BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780138|ref|YP_003064551.1| ABC transporter [Candidatus
Liberibacter asiaticus str. psy62]
         (373 letters)

Database: nr 
           13,984,884 sequences; 4,792,584,752 total letters

Searching..................................................done


Results from round 1


>gi|254780138|ref|YP_003064551.1| ABC transporter [Candidatus Liberibacter asiaticus str. psy62]
 gi|254039815|gb|ACT56611.1| ABC transporter [Candidatus Liberibacter asiaticus str. psy62]
          Length = 373

 Score =  749 bits (1933), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/373 (100%), Positives = 373/373 (100%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY
Sbjct: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
           FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK
Sbjct: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA
Sbjct: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE
Sbjct: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR
Sbjct: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
           FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII
Sbjct: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360

Query: 361 DSLFAIFYFAIGI 373
           DSLFAIFYFAIGI
Sbjct: 361 DSLFAIFYFAIGI 373


>gi|315122740|ref|YP_004063229.1| ABC transporter [Candidatus Liberibacter solanacearum CLso-ZC1]
 gi|313496142|gb|ADR52741.1| ABC transporter [Candidatus Liberibacter solanacearum CLso-ZC1]
          Length = 211

 Score =  378 bits (971), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 184/211 (87%), Positives = 206/211 (97%)

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           +GV+GVPV+ILISFVTGAVIAQQGAFQLS FGAEIF+IDLMSILQLREIGVLLTAVM+AG
Sbjct: 1   MGVTGVPVIILISFVTGAVIAQQGAFQLSNFGAEIFAIDLMSILQLREIGVLLTAVMVAG 60

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           RSGSAIVAEIGSMKINEEID+++T+G+D VR+LISPRIWALIISLPLLTILAN+SAI+GA
Sbjct: 61  RSGSAIVAEIGSMKINEEIDSLKTIGIDLVRVLISPRIWALIISLPLLTILANYSAIVGA 120

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
           SI++WKYYDIPF+VFF+RFHSTATL N+FTGLIKAPFMACAIGIVAMKEGF VG +S+SL
Sbjct: 121 SIIVWKYYDIPFSVFFARFHSTATLGNVFTGLIKAPFMACAIGIVAMKEGFGVGTNSDSL 180

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           GK+VTTCVVQSIS+VIIIDSLFAIFYFAIGI
Sbjct: 181 GKRVTTCVVQSISMVIIIDSLFAIFYFAIGI 211


>gi|222086200|ref|YP_002544732.1| ABC transporter [Agrobacterium radiobacter K84]
 gi|221723648|gb|ACM26804.1| ABC transporter [Agrobacterium radiobacter K84]
          Length = 386

 Score =  295 bits (756), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 161/370 (43%), Positives = 242/370 (65%), Gaps = 18/370 (4%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME--KYH 66
           +R  GNW+S  +  +   +     +S      ++DLS ++++DT GA LI    E  + H
Sbjct: 26  YRLEGNWRSANVHGVLRRIDELTTRS-AGGRVVIDLSDLSDVDTAGALLIRRLKESQEAH 84

Query: 67  G-KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
           G  + ++G ++HI++L  L +FT     +  +P++   +   + +   IG+ + +   + 
Sbjct: 85  GASVSIEGSNSHIDEL--LTAFTEDPDAEKPEPRQKKSWT--ERIFAPIGETVYEVWGNL 140

Query: 126 CSQAHILGLVISNTGEFCASSYKF-KGFLLS---LIRQMYYVGVSGVPVVILISFVTGAV 181
            +  +ILG  +        +  KF +G  +S   ++ Q+ ++GV  VP+++L+S++ GA+
Sbjct: 141 VAAMYILGSAVRG------AQLKFGRGSGVSPASIVNQIDHMGVRAVPIILLMSYLIGAI 194

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IAQQGAFQL  FGAE+F +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EE+
Sbjct: 195 IAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREEV 254

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA++ MGL+ + +LI PR+ AL ++LPLLTILANF+++ GA+ V W Y  I FA F +R 
Sbjct: 255 DALKVMGLNPIGVLIFPRLVALTVALPLLTILANFASLFGAATVTWAYSGITFATFIARL 314

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           H   +L+ + +G+IKAPFMA  IGIVA  EG  VG  + SLG+ VT  VV+SI +VI++D
Sbjct: 315 HEAISLSTVISGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTASVVKSIFVVILMD 374

Query: 362 SLFAIFYFAI 371
            LFA+FY AI
Sbjct: 375 GLFAMFYAAI 384


>gi|241204915|ref|YP_002976011.1| hypothetical protein Rleg_2195 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240858805|gb|ACS56472.1| protein of unknown function DUF140 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 394

 Score =  293 bits (749), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 167/369 (45%), Positives = 237/369 (64%), Gaps = 19/369 (5%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF--MEKYHG 67
           R  GNW+S  I  +  D    + K  ++    VDLS I+EIDT G  L+      E+  G
Sbjct: 36  RLQGNWRSAYIHLVLRDFEKLLQK--KTGDLTVDLSDISEIDTAGIWLLCRLKKQEEAGG 93

Query: 68  K-IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
           + ++ +G ++HI+++  ++S    K    Q  + S     F      IGK   +  ++  
Sbjct: 94  RTVRFEGTNSHIDEMLEMVSEEPAKVEPEQTEKVSLAARIFA----PIGKMTYEVWDNFA 149

Query: 127 SQAHILGLVISNTGEFCASSYKF-KGFLLS---LIRQMYYVGVSGVPVVILISFVTGAVI 182
           +  +ILG  +        +  KF +G  +S   ++ Q+ ++GV  VP+++L+SF+ GA+I
Sbjct: 150 AAMYILGSAVRG------AQMKFGRGSGVSPASIVNQIDHMGVRAVPIILLMSFLIGAII 203

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGAFQL  FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ EEID
Sbjct: 204 AQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMREEID 263

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++ MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA+ V W Y  I FA F SR H
Sbjct: 264 ALKVMGLNPIGVLIFPRLVALTIALPLLTVLANFASLGGAAAVAWGYSGITFANFLSRLH 323

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
              TL+ + +G+IKAPFMA  IGIVA  EG  VG  + SLG+ VT  VV++I +VI++D 
Sbjct: 324 EAVTLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTAAVVKAIFVVILMDG 383

Query: 363 LFAIFYFAI 371
           LFA+FY AI
Sbjct: 384 LFAMFYAAI 392


>gi|116252407|ref|YP_768245.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115257055|emb|CAK08149.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 389

 Score =  290 bits (743), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 168/369 (45%), Positives = 235/369 (63%), Gaps = 19/369 (5%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF--MEKYHG 67
           R  GNW+S  I  +  D    + K     S  VDLS I+EIDT G  L+      E+  G
Sbjct: 31  RLQGNWRSAYIHLVLRDFEKLLQKKTGDLS--VDLSDISEIDTAGIWLLCRLKKQEEAGG 88

Query: 68  K-IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
           + ++ +G ++HI+++  + S    K    Q  + S     F      IGK   +  ++  
Sbjct: 89  RTVRFEGTNSHIDEMLEMFSEEPAKVEPEQTEKVSLAARIFA----PIGKMTYEVWDNFA 144

Query: 127 SQAHILGLVISNTGEFCASSYKF-KGFLLS---LIRQMYYVGVSGVPVVILISFVTGAVI 182
           +  +ILG  +        +  KF +G  +S   ++ Q+ ++GV  VP+++L+SF+ GA+I
Sbjct: 145 AAMYILGSAVRG------AQMKFGRGSGVSPASIVNQIDHMGVRAVPIILLMSFLIGAII 198

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGAFQL  FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ EEID
Sbjct: 199 AQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMREEID 258

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++ MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA+ V W Y  I FA F SR H
Sbjct: 259 ALKVMGLNPIGVLIFPRLVALTIALPLLTVLANFASLGGAAAVAWGYSGITFANFLSRLH 318

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
              TL+ + +G+IKAPFMA  IGIVA  EG  VG  + SLG+ VT  VV++I +VI++D 
Sbjct: 319 EAVTLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTAAVVKAIFVVILMDG 378

Query: 363 LFAIFYFAI 371
           LFA+FY AI
Sbjct: 379 LFAMFYAAI 387


>gi|254710104|ref|ZP_05171915.1| Sulfate transporter/antisigma-factor [Brucella pinnipedialis B2/94]
 gi|261317653|ref|ZP_05956850.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261296876|gb|EEY00373.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
          Length = 391

 Score =  284 bits (726), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 158/373 (42%), Positives = 229/373 (61%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI   
Sbjct: 23  EQDGMRVIHLSGHWISQSV-HLVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81

Query: 62  MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++    H  ++L+GV      L   +     + +   + +  FF+ +F N+   +G  +
Sbjct: 82  RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ND     HILG  I                + +++ QM  +GV  +P+V+L+S + 
Sbjct: 139 ISMFNDFKMAMHILGATIRGAQLKYGRGNGIP--IAAIVTQMDRMGVGAIPIVVLMSTIV 196

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F 
Sbjct: 257 EETDALTVIGLNAVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 377 VVDGLFAMFYAAI 389


>gi|254693733|ref|ZP_05155561.1| hypothetical protein Babob3T_03544 [Brucella abortus bv. 3 str.
           Tulya]
 gi|261214007|ref|ZP_05928288.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
 gi|260915614|gb|EEX82475.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
          Length = 391

 Score =  284 bits (726), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 158/373 (42%), Positives = 229/373 (61%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI   
Sbjct: 23  EQDGMRVIHLSGHWISQSV-HLVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81

Query: 62  MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++    H  ++L+GV      L   +     + +   + +  FF+ +F N+   +G  +
Sbjct: 82  RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ND     HILG  I                + +++ QM  +GV  +P+V+L+S + 
Sbjct: 139 ISMFNDFKMAMHILGATIRGAQLKYGRGNGIP--IAAIVTQMDRMGVGAIPIVVLMSTIV 196

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F 
Sbjct: 257 EETDALTVIGLNPVGVLVFPRLAALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 377 VVDGLFAMFYAAI 389


>gi|189024185|ref|YP_001934953.1| Sulfate transporter/antisigma-factor [Brucella abortus S19]
 gi|189019757|gb|ACD72479.1| Sulfate transporter/antisigma-factor [Brucella abortus S19]
          Length = 390

 Score =  284 bits (726), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 158/373 (42%), Positives = 229/373 (61%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI   
Sbjct: 22  EQDGMRVIHLSGHWISQSV-HLVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 80

Query: 62  MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++    H  ++L+GV      L   +     + +   + +  FF+ +F N+   +G  +
Sbjct: 81  RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 137

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ND     HILG  I                + +++ QM  +GV  +P+V+L+S + 
Sbjct: 138 ISMFNDFKMAMHILGATIRGAQLKYGRGNGIP--IAAIVTQMDRMGVGAIPIVVLMSTIV 195

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 196 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 255

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F 
Sbjct: 256 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 315

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 316 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 375

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 376 VVDGLFAMFYAAI 388


>gi|327190640|gb|EGE57728.1| putative ABC transporter, permease protein [Rhizobium etli
           CNPAF512]
          Length = 383

 Score =  284 bits (726), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 162/366 (44%), Positives = 236/366 (64%), Gaps = 13/366 (3%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM--EKYHG 67
           R +GNW+S  +  +  D    +++  ++ +  VDLS IT+IDT G  L+      E+  G
Sbjct: 25  RLSGNWRSAYVHLVLRDFEKLLHQ--KAGNLTVDLSEITDIDTAGIWLLCRLKKEEEAAG 82

Query: 68  K-IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
           + ++ +G + HI+++ ++ S    K     K + S        +   IGK      ++  
Sbjct: 83  RTVRFEGTNPHIDEMLAMFSEEPAKPEPEPKEKVSLA----ARILAPIGKMTYDVWDNLA 138

Query: 127 SQAHILGLVISNTG-EFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
           +  +ILG  +     +F   S        S++ Q+ ++GV  VP+++L+SF+ GA+IAQQ
Sbjct: 139 AAMYILGSAVRGAQMKFGRGSGVSPA---SIVNQIDHMGVRAVPIILLMSFLIGAIIAQQ 195

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           GAFQL  FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ EEIDA++
Sbjct: 196 GAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMREEIDALK 255

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA++V W Y  I FA F +R H   
Sbjct: 256 VMGLNPIGVLIFPRLVALTIALPLLTVLANFASLAGAAVVAWGYSGITFANFLARLHEAV 315

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           TL+ + +G+IKAPFMA  IGIVA  EG  VG  + SLG+ VT  VV++I +VI++D LFA
Sbjct: 316 TLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTASVVKAIFVVILMDGLFA 375

Query: 366 IFYFAI 371
           +FY AI
Sbjct: 376 MFYAAI 381


>gi|190892035|ref|YP_001978577.1| probable ABC transporter, permease protein [Rhizobium etli CIAT
           652]
 gi|190697314|gb|ACE91399.1| probable ABC transporter, permease protein [Rhizobium etli CIAT
           652]
          Length = 389

 Score =  283 bits (725), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 162/366 (44%), Positives = 236/366 (64%), Gaps = 13/366 (3%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM--EKYHG 67
           R +GNW+S  +  +  D    +++  ++ +  VDLS IT+IDT G  L+      E+  G
Sbjct: 31  RLSGNWRSAYVHLVLRDFEKLLHQ--KTGNLTVDLSEITDIDTAGIWLLCRLKKEEEAAG 88

Query: 68  K-IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
           + ++ +G + HI+++ ++ S    K     K + S        +   IGK      ++  
Sbjct: 89  RTVRFEGTNPHIDEMLAMFSEEPAKPEPEPKEKVSLA----ARILAPIGKMTYDVWDNLA 144

Query: 127 SQAHILGLVISNTG-EFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
           +  +ILG  +     +F   S        S++ Q+ ++GV  VP+++L+SF+ GA+IAQQ
Sbjct: 145 AAMYILGSAVRGAQMKFGRGSGVSPA---SIVNQIDHMGVRAVPIILLMSFLIGAIIAQQ 201

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           GAFQL  FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ EEIDA++
Sbjct: 202 GAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMREEIDALK 261

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA++V W Y  I FA F +R H   
Sbjct: 262 VMGLNPIGVLIFPRLVALTIALPLLTVLANFASLAGAAVVAWGYSGITFANFLARLHEAV 321

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           TL+ + +G+IKAPFMA  IGIVA  EG  VG  + SLG+ VT  VV++I +VI++D LFA
Sbjct: 322 TLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTASVVKAIFVVILMDGLFA 381

Query: 366 IFYFAI 371
           +FY AI
Sbjct: 382 MFYAAI 387


>gi|23501899|ref|NP_698026.1| toulene ABC transporter permease [Brucella suis 1330]
 gi|62289942|ref|YP_221735.1| toulene ABC transporter permease [Brucella abortus bv. 1 str.
           9-941]
 gi|82699870|ref|YP_414444.1| sulfate transporter [Brucella melitensis biovar Abortus 2308]
 gi|237815443|ref|ZP_04594441.1| toulene ABC transporter, permease protein [Brucella abortus str.
           2308 A]
 gi|254697384|ref|ZP_05159212.1| Sulfate transporter/antisigma-factor [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254706786|ref|ZP_05168614.1| Sulfate transporter/antisigma-factor [Brucella pinnipedialis
           M163/99/10]
 gi|254730282|ref|ZP_05188860.1| Sulfate transporter/antisigma-factor [Brucella abortus bv. 4 str.
           292]
 gi|256031600|ref|ZP_05445214.1| Sulfate transporter/antisigma-factor [Brucella pinnipedialis
           M292/94/1]
 gi|256159738|ref|ZP_05457485.1| Sulfate transporter/antisigma-factor [Brucella ceti M490/95/1]
 gi|256255000|ref|ZP_05460536.1| Sulfate transporter/antisigma-factor [Brucella ceti B1/94]
 gi|256257499|ref|ZP_05463035.1| Sulfate transporter/antisigma-factor [Brucella abortus bv. 9 str.
           C68]
 gi|256369443|ref|YP_003106951.1| toluene ABC transporter, permease protein, putative [Brucella
           microti CCM 4915]
 gi|260545309|ref|ZP_05821050.1| sulfate transporter/antisigma-factor [Brucella abortus NCTC 8038]
 gi|260757978|ref|ZP_05870326.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260761801|ref|ZP_05874144.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260883775|ref|ZP_05895389.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|261222188|ref|ZP_05936469.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|261314254|ref|ZP_05953451.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|265988688|ref|ZP_06101245.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|265998152|ref|ZP_06110709.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|297248343|ref|ZP_06932061.1| ABC transport system permease [Brucella abortus bv. 5 str. B3196]
 gi|23347840|gb|AAN29941.1| toulene ABC transporter, permease protein, putative [Brucella suis
           1330]
 gi|62196074|gb|AAX74374.1| hypothetical toulene ABC transporter, permease protein [Brucella
           abortus bv. 1 str. 9-941]
 gi|82615971|emb|CAJ10994.1| Sulfate transporter/antisigma-factor antagonist STAS:Protein of
           unknown function DUF140 [Brucella melitensis biovar
           Abortus 2308]
 gi|237790280|gb|EEP64490.1| toulene ABC transporter, permease protein [Brucella abortus str.
           2308 A]
 gi|255999603|gb|ACU48002.1| toluene ABC transporter, permease protein, putative [Brucella
           microti CCM 4915]
 gi|260096716|gb|EEW80591.1| sulfate transporter/antisigma-factor [Brucella abortus NCTC 8038]
 gi|260668296|gb|EEX55236.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260672233|gb|EEX59054.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260873303|gb|EEX80372.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|260920772|gb|EEX87425.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|261303280|gb|EEY06777.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|262552620|gb|EEZ08610.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|264660885|gb|EEZ31146.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|297175512|gb|EFH34859.1| ABC transport system permease [Brucella abortus bv. 5 str. B3196]
          Length = 391

 Score =  283 bits (725), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 158/373 (42%), Positives = 229/373 (61%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI   
Sbjct: 23  EQDGMRVIHLSGHWISQSV-HLVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81

Query: 62  MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++    H  ++L+GV      L   +     + +   + +  FF+ +F N+   +G  +
Sbjct: 82  RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ND     HILG  I                + +++ QM  +GV  +P+V+L+S + 
Sbjct: 139 ISMFNDFKMAMHILGATIRGAQLKYGRGNGIP--IAAIVTQMDRMGVGAIPIVVLMSTIV 196

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F 
Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 377 VVDGLFAMFYAAI 389


>gi|294852390|ref|ZP_06793063.1| ABC transport system permease [Brucella sp. NVSL 07-0026]
 gi|294820979|gb|EFG37978.1| ABC transport system permease [Brucella sp. NVSL 07-0026]
          Length = 391

 Score =  283 bits (724), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 157/373 (42%), Positives = 229/373 (61%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI   
Sbjct: 23  EQDGMRVIHLSGHWISQSV-HLVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81

Query: 62  MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++    H  ++L+GV      L   +     + +   + +  FF+ +F N+   +G  +
Sbjct: 82  RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ND     HILG  I                + +++ QM  +GV  +P+++L+S + 
Sbjct: 139 ISMFNDFKMAMHILGATIRGAQLKYGRGNGIP--IAAIVTQMDRMGVGAIPIIVLMSTIV 196

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F 
Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 377 VVDGLFAMFYAAI 389


>gi|254689249|ref|ZP_05152503.1| Sulfate transporter/antisigma-factor [Brucella abortus bv. 6 str.
           870]
 gi|260754755|ref|ZP_05867103.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260674863|gb|EEX61684.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
          Length = 391

 Score =  283 bits (724), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 158/373 (42%), Positives = 229/373 (61%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI   
Sbjct: 23  EQDGMRVIHLSGHWISQSV-HLVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81

Query: 62  MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++   K   ++L+GV      L   +     + +   + +  FF+ +F N+   +G  +
Sbjct: 82  RQRLAAKYVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ND     HILG  I                + +++ QM  +GV  +P+V+L+S + 
Sbjct: 139 ISMFNDFKMAMHILGATIRGAQLKYGRGNGIP--IAAIVTQMDRMGVGAIPIVVLMSTIV 196

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F 
Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 377 VVDGLFAMFYAAI 389


>gi|225627497|ref|ZP_03785534.1| toulene ABC transporter permease protein [Brucella ceti str. Cudo]
 gi|260168729|ref|ZP_05755540.1| Sulfate transporter/antisigma-factor [Brucella sp. F5/99]
 gi|261758207|ref|ZP_06001916.1| sulfate transporter/antisigma-factor [Brucella sp. F5/99]
 gi|225617502|gb|EEH14547.1| toulene ABC transporter permease protein [Brucella ceti str. Cudo]
 gi|261738191|gb|EEY26187.1| sulfate transporter/antisigma-factor [Brucella sp. F5/99]
          Length = 391

 Score =  283 bits (724), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 158/373 (42%), Positives = 228/373 (61%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI   
Sbjct: 23  EQDGMRVIHLSGHWISQSV-HLVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81

Query: 62  MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++   K   ++L+GV      L   +     + +   + +  FF+ +F N+   +G  +
Sbjct: 82  RQRLAAKYVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ND     HILG  I                + +++ QM   GV  +P+V+L+S + 
Sbjct: 139 ISMFNDFKMAMHILGATIRGAQLKYGRGNGIP--IAAIVTQMDRTGVGAIPIVVLMSTIV 196

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F 
Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 377 VVDGLFAMFYAAI 389


>gi|17987248|ref|NP_539882.1| toluene tolerance protein Ttg2B [Brucella melitensis bv. 1 str.
           16M]
 gi|17982923|gb|AAL52146.1| toluene tolerance protein ttg2b [Brucella melitensis bv. 1 str.
           16M]
          Length = 390

 Score =  283 bits (723), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 158/373 (42%), Positives = 228/373 (61%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G+ V   +G W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI   
Sbjct: 22  EQDGMRVIHLSGPWISQSV-HLVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 80

Query: 62  MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++    H  ++L+GV      L   +     + +   + +  FF+ +F N+   +G  +
Sbjct: 81  RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 137

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ND     HILG  I                + +++ QM  +GV  +P+V+L+S + 
Sbjct: 138 ISMFNDFKMAMHILGATIRGAQLKYGRGNGIP--IAAIVTQMDRMGVGAIPIVVLMSTIV 195

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 196 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 255

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F 
Sbjct: 256 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 315

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 316 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 375

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 376 VVDGLFAMFYAAI 388


>gi|225852524|ref|YP_002732757.1| hypothetical protein BMEA_A1060 [Brucella melitensis ATCC 23457]
 gi|256044678|ref|ZP_05447582.1| hypothetical protein Bmelb1R_09298 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256113572|ref|ZP_05454392.1| hypothetical protein Bmelb3E_12477 [Brucella melitensis bv. 3 str.
           Ether]
 gi|256263986|ref|ZP_05466518.1| sulfate transporter/antisigma-factor [Brucella melitensis bv. 2
           str. 63/9]
 gi|260564024|ref|ZP_05834510.1| sulfate transporter/antisigma-factor [Brucella melitensis bv. 1
           str. 16M]
 gi|265991102|ref|ZP_06103659.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265994939|ref|ZP_06107496.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|225640889|gb|ACO00803.1| protein of unknown function DUF140 [Brucella melitensis ATCC 23457]
 gi|260154040|gb|EEW89132.1| sulfate transporter/antisigma-factor [Brucella melitensis bv. 1
           str. 16M]
 gi|262766052|gb|EEZ11841.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|263001886|gb|EEZ14461.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263094130|gb|EEZ18052.1| sulfate transporter/antisigma-factor [Brucella melitensis bv. 2
           str. 63/9]
 gi|326409040|gb|ADZ66105.1| conserved hypothetical protein [Brucella melitensis M28]
 gi|326538749|gb|ADZ86964.1| conserved hypothetical protein [Brucella melitensis M5-90]
          Length = 391

 Score =  283 bits (723), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 158/373 (42%), Positives = 228/373 (61%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G+ V   +G W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI   
Sbjct: 23  EQDGMRVIHLSGPWISQSV-HLVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81

Query: 62  MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++    H  ++L+GV      L   +     + +   + +  FF+ +F N+   +G  +
Sbjct: 82  RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ND     HILG  I                + +++ QM  +GV  +P+V+L+S + 
Sbjct: 139 ISMFNDFKMAMHILGATIRGAQLKYGRGNGIP--IAAIVTQMDRMGVGAIPIVVLMSTIV 196

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F 
Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 377 VVDGLFAMFYAAI 389


>gi|86357964|ref|YP_469856.1| ABC transporter permease [Rhizobium etli CFN 42]
 gi|86282066|gb|ABC91129.1| probable ABC transporter, permease protein [Rhizobium etli CFN 42]
          Length = 389

 Score =  282 bits (722), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 161/372 (43%), Positives = 232/372 (62%), Gaps = 25/372 (6%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSA---IVDLSAITEIDTIGAELIMYF--MEK 64
           R +GNW+S  +      +V+   + +Q +      +DLS +++IDT G  L+      E+
Sbjct: 31  RLSGNWRSAYVH-----LVLHEFEKLQREKTGNLTLDLSDVSDIDTAGIWLLCRLKKQEE 85

Query: 65  YHGK-IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
             G+ ++  G + HI+++  + S    K    QK + S        L    GK      +
Sbjct: 86  AAGRTVRFVGTNPHIDEMLEMFSEEPAKPEPEQKEKVSLAARILAPL----GKMTYDIWD 141

Query: 124 DSCSQAHILGLVISNT----GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           +  +  +ILG  +       G     S        S++ Q+ ++GV  VP+++L+SF+ G
Sbjct: 142 NLAASMYILGSAVRGAQMKLGRGSGVSPA------SIVNQIDHMGVRAVPIILLMSFLIG 195

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           A+IAQQGAFQL  FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ E
Sbjct: 196 AIIAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMRE 255

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDA++ MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA++V W Y  I FA F +
Sbjct: 256 EIDALKVMGLNPIGVLIFPRLVALTIALPLLTVLANFASLAGAAVVAWGYSGITFANFLA 315

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           R H   TL+ + +G+IKAPFMA  IGIVA  EG  VG  + SLG+ VT  VV++I +VI+
Sbjct: 316 RLHEAITLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTASVVKAIFVVIL 375

Query: 360 IDSLFAIFYFAI 371
           +D LFA+FY AI
Sbjct: 376 MDGLFAMFYAAI 387


>gi|254714105|ref|ZP_05175916.1| Sulfate transporter/antisigma-factor [Brucella ceti M644/93/1]
 gi|254716838|ref|ZP_05178649.1| Sulfate transporter/antisigma-factor [Brucella ceti M13/05/1]
 gi|261218640|ref|ZP_05932921.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261321862|ref|ZP_05961059.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|260923729|gb|EEX90297.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261294552|gb|EEX98048.1| conserved hypothetical protein [Brucella ceti M644/93/1]
          Length = 391

 Score =  282 bits (722), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 158/373 (42%), Positives = 228/373 (61%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++GI V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI   
Sbjct: 23  EQDGIRVIHLSGHWISQSV-HLVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81

Query: 62  MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++    H  ++L+GV      L   +     + +   + +  FF+ +F N+   +G  +
Sbjct: 82  RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ND     HILG  I                + +++ QM  +GV  +P+V+L+S + 
Sbjct: 139 ISMFNDFKMAMHILGATIRGAQLKYGRGNGIP--IAAIVTQMDRMGVGAIPIVVLMSTIV 196

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAEIF +DL+ IL LRE+G LLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGGLLTAIMIAGRSGSAITAEIGSMKMR 256

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F 
Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 377 VVDGLFAMFYAAI 389


>gi|254719095|ref|ZP_05180906.1| Sulfate transporter/antisigma-factor [Brucella sp. 83/13]
 gi|265984086|ref|ZP_06096821.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|306838379|ref|ZP_07471224.1| Sulfate transporter/antisigma-factor [Brucella sp. NF 2653]
 gi|264662678|gb|EEZ32939.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|306406519|gb|EFM62753.1| Sulfate transporter/antisigma-factor [Brucella sp. NF 2653]
          Length = 391

 Score =  282 bits (721), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 157/373 (42%), Positives = 228/373 (61%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI   
Sbjct: 23  EQDGMRVIHLSGHWISQSV-HLVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81

Query: 62  MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++    H  ++L+GV      L   +     + +   + +  FF+ +F N+   +G  +
Sbjct: 82  RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ND     HILG  I                + +++ QM  +GV  +P+V+L+S + 
Sbjct: 139 ISMFNDFKMAMHILGATIRGAQLKYGRGNGIP--IAAIVTQMDRMGVGAIPIVVLMSTIV 196

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FG EIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 197 GAIIAQQGAFQLRYFGTEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F 
Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 377 VVDGLFAMFYAAI 389


>gi|163843287|ref|YP_001627691.1| hypothetical protein BSUIS_A1062 [Brucella suis ATCC 23445]
 gi|163674010|gb|ABY38121.1| protein of unknown function DUF140 [Brucella suis ATCC 23445]
          Length = 391

 Score =  282 bits (721), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 157/373 (42%), Positives = 228/373 (61%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI   
Sbjct: 23  EQDGMRVIHLSGHWISQSV-HLVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81

Query: 62  MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++    H  ++L+GV      L   +     + +   + +  FF+ +F N+   +G  +
Sbjct: 82  RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ND     HILG  I                + +++ QM  +GV  +P+V+L+S + 
Sbjct: 139 ISMFNDFKMAMHILGATIRGAQLKYGRGNGIP--IAAIVTQMDRMGVGAIPIVVLMSTIV 196

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F 
Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY  I
Sbjct: 377 VVDGLFAMFYATI 389


>gi|306840506|ref|ZP_07473265.1| Sulfate transporter/antisigma-factor [Brucella sp. BO2]
 gi|306843893|ref|ZP_07476488.1| Sulfate transporter/antisigma-factor [Brucella sp. BO1]
 gi|306275648|gb|EFM57372.1| Sulfate transporter/antisigma-factor [Brucella sp. BO1]
 gi|306289521|gb|EFM60739.1| Sulfate transporter/antisigma-factor [Brucella sp. BO2]
          Length = 391

 Score =  281 bits (719), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 156/373 (41%), Positives = 228/373 (61%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G  V   +G+W S  + ++ DD +  I ++    +  +D+S I+ +DT GA LI   
Sbjct: 23  EQDGARVIHLSGHWISQSV-QLVDDKMRGIEQAGGDKATTIDISGISNLDTAGAWLIERL 81

Query: 62  MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++    H  ++L+GV      L   +     + +   + +  FF+ +F N+   +G  +
Sbjct: 82  RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ND     HILG  I                + +++ QM  +GV  +P+V+L+S + 
Sbjct: 139 ISMFNDFKMAMHILGATIRGAQLKYGRGNGIP--IAAIVTQMDRMGVGAIPIVVLMSTIV 196

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F 
Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376

Query: 359 IIDSLFAIFYFAI 371
           ++D +FA+FY AI
Sbjct: 377 VVDGMFAMFYAAI 389


>gi|256061111|ref|ZP_05451265.1| hypothetical protein Bneo5_12197 [Brucella neotomae 5K33]
 gi|261325112|ref|ZP_05964309.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261301092|gb|EEY04589.1| conserved hypothetical protein [Brucella neotomae 5K33]
          Length = 391

 Score =  281 bits (719), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 157/373 (42%), Positives = 228/373 (61%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI   
Sbjct: 23  EQDGMRVIHLSGHWISQSV-HLVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81

Query: 62  MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++    H  ++L+GV      L   +     + +   + +  FF+ +F N+   +G  +
Sbjct: 82  RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ND     HILG  I                + +++ QM  +GV  +P+V+L+S + 
Sbjct: 139 ISMFNDFKMAMHILGATIRGAQLKYGRGNGIP--IAAIVTQMDRMGVGAIPIVVLMSTIV 196

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL++ LP LTIL++ SA++GA+ V W Y +I    F 
Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPPLTILSDLSALVGAAGVSWLYSNISPEAFI 316

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 377 VVDGLFAMFYAAI 389


>gi|161618971|ref|YP_001592858.1| hypothetical protein BCAN_A1034 [Brucella canis ATCC 23365]
 gi|254704312|ref|ZP_05166140.1| hypothetical protein Bsuib36_10354 [Brucella suis bv. 3 str. 686]
 gi|260566441|ref|ZP_05836911.1| sulfate transporter/antisigma-factor [Brucella suis bv. 4 str. 40]
 gi|261754981|ref|ZP_05998690.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|161335782|gb|ABX62087.1| protein of unknown function DUF140 [Brucella canis ATCC 23365]
 gi|260155959|gb|EEW91039.1| sulfate transporter/antisigma-factor [Brucella suis bv. 4 str. 40]
 gi|261744734|gb|EEY32660.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
          Length = 391

 Score =  281 bits (719), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 157/373 (42%), Positives = 228/373 (61%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI   
Sbjct: 23  EQDGMRVIHLSGHWISQSV-HLVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81

Query: 62  MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++    H  ++L+GV      L   +     + +   + +  FF+ +F N+   +G  +
Sbjct: 82  RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ND     HILG  I                + +++ QM  +GV  +P+V+L+S + 
Sbjct: 139 ISMFNDFKMAMHILGATIRGAQLKYGRGNGIP--IAAIVTQMDRMGVGAIPIVVLMSTIV 196

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F 
Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           S  H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 317 SHLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 377 VVDGLFAMFYAAI 389


>gi|110633893|ref|YP_674101.1| hypothetical protein Meso_1540 [Mesorhizobium sp. BNC1]
 gi|110284877|gb|ABG62936.1| protein of unknown function DUF140 [Chelativorans sp. BNC1]
          Length = 395

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 163/373 (43%), Positives = 227/373 (60%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--M 59
            ENG  V R +GNW +  +S + DD +  +         I+DL  +  +DT GA L+  +
Sbjct: 27  EENGALVCRLSGNWTTRTVS-LVDDPMRRLRARKGLTHFIIDLGDVGHLDTAGAWLVSRL 85

Query: 60  YFMEKYHG-KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
              +K +G ++++ G S     L + I  T ++      P+     N   N+   +G+ I
Sbjct: 86  AAAQKENGAQVEISGQSEAASILLAAIEPTAQEP---DVPKDGRRGNLIVNILAAMGRTI 142

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
               +D     HILG  IS         +      ++   Q+  +GV  +P+++L+S V 
Sbjct: 143 YDIKDDVLYGMHILGATISGAQMKLGRGHAVNPAAIA--NQIDRMGVGSIPIIVLMSAVV 200

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAEI+ +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 201 GAIIAQQGAFQLRWFGAEIYVVDLVGILILRELGVLLTAIMIAGRSGSAITAEIGSMKMR 260

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE+DA+  +GL+ V +L+ PR+ AL++++P LTI+ANFSA+ GA +V W Y DI  A F 
Sbjct: 261 EEVDALTVIGLNPVGVLVFPRLVALVVAVPCLTIVANFSALGGAILVAWLYSDIMPATFI 320

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
            R H    L +IF GLIKAPFMA  IGI+A  EG  VG  + SLGK VT  VV++I +VI
Sbjct: 321 QRLHDAIDLTSIFAGLIKAPFMALIIGIIASVEGMKVGGSAESLGKHVTASVVKTIFLVI 380

Query: 359 IIDSLFAIFYFAI 371
           +ID LFA+FY AI
Sbjct: 381 VIDGLFAMFYAAI 393


>gi|254701770|ref|ZP_05163598.1| Sulfate transporter/antisigma-factor [Brucella suis bv. 5 str. 513]
 gi|261752323|ref|ZP_05996032.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|261742076|gb|EEY30002.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
          Length = 391

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 157/373 (42%), Positives = 228/373 (61%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI   
Sbjct: 23  EQDGMRVIHLSGHWISQSV-HLVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81

Query: 62  MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++    H  ++L+GV      L   +     + +   + +  FF+ +F N+   +G  +
Sbjct: 82  RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ND     HILG  I                + +++ QM  +GV  +P+V+L+S + 
Sbjct: 139 ISMFNDFKMAMHILGATIRGAQLKYGRGNGIP--IAAIVTQMDRMGVGAIPIVVLMSTIV 196

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V   Y +I    F 
Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSCLYSNISPEAFI 316

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 377 VVDGLFAMFYAAI 389


>gi|222148407|ref|YP_002549364.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
 gi|221735395|gb|ACM36358.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
          Length = 376

 Score =  277 bits (709), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 152/365 (41%), Positives = 231/365 (63%), Gaps = 11/365 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--MYFMEKYH 66
            R +G+W++  +  +   + + + +++     I D++ I+ +DT GA +I  +       
Sbjct: 19  LRLSGSWRNTTVDTVIPKL-LELRETLNGHVEI-DITGISSLDTSGAWIIRRIELAASKQ 76

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
           G +++ G S  + +L S  +   +  +  +   R  F   F+ +   +GK  V    D  
Sbjct: 77  GDVQIVGGSDAMRELIS--ALPEQPPLPEKVVDRRPF---FQRVLEPVGKMSVSLFEDVL 131

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           + +++LG  +  T          +  + S++ Q+ ++G+  VP+++L+SF+ GA+IAQQG
Sbjct: 132 AMSYVLGSAVRGTQ--SKERRGGRASIASIVNQLDHMGLRAVPIILLMSFLIGAIIAQQG 189

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           AFQL  FGAE+F +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EE+DA++ 
Sbjct: 190 AFQLRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREEVDALKV 249

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +GL+ + +L+ PRI AL+I+LPLLT++ANF+A+ GA++V + Y  I F VF +R H    
Sbjct: 250 IGLNPIGVLVLPRIVALVIALPLLTVIANFAALYGAAVVSFAYSGITFQVFVTRLHDAVD 309

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
            A    GLIKAPFMA  IGIVA  EG  VG  + SLG+ VT  VV+SI +VI++D LFA+
Sbjct: 310 YATFAAGLIKAPFMAVVIGIVAAVEGMKVGGSAESLGQHVTASVVKSIFVVILMDGLFAV 369

Query: 367 FYFAI 371
           FY AI
Sbjct: 370 FYAAI 374


>gi|209549578|ref|YP_002281495.1| hypothetical protein Rleg2_1984 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209535334|gb|ACI55269.1| protein of unknown function DUF140 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 383

 Score =  276 bits (706), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 162/366 (44%), Positives = 232/366 (63%), Gaps = 13/366 (3%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM--EKYHG 67
           R  GNW+S  +  +  D    +++  ++    VDLS IT+IDT G  L+      E+  G
Sbjct: 25  RLKGNWRSAYVHFVLRDFEKLLHQ--KAGDLTVDLSDITDIDTAGIWLLCRLKKEEEAAG 82

Query: 68  K-IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
           + ++ +G + HI+++  + S    K     K + S        +   IG+      ++  
Sbjct: 83  RTVRFEGTNPHIDEMLEMFSEEPAKPEPELKEKVSLA----ARILAPIGRMTYDIWDNFA 138

Query: 127 SQAHILGLVISNTG-EFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
           +  +ILG  +     +F   S        S++ Q+ ++GV  VP+++L+SF+ GA+IAQQ
Sbjct: 139 AAMYILGSAVRGAQMKFGRGSGVSPA---SIVNQIDHMGVRAVPIILLMSFLIGAIIAQQ 195

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           GAFQL  FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ EEIDA++
Sbjct: 196 GAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMREEIDALK 255

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA+ V W Y  I FA F SR H   
Sbjct: 256 VMGLNPIGVLIFPRLVALTIALPLLTVLANFASLAGAAAVAWGYSGITFANFLSRLHEAV 315

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           TL+ + +G+IKAPFMA  IGIVA  EG  VG  + SLG+ VT  VV++I +VI++D LFA
Sbjct: 316 TLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTAAVVKAIFVVILMDGLFA 375

Query: 366 IFYFAI 371
           +FY AI
Sbjct: 376 MFYAAI 381


>gi|148560485|ref|YP_001258960.1| putative toulene ABC transporter permease [Brucella ovis ATCC
           25840]
 gi|148371742|gb|ABQ61721.1| putative toulene ABC transporter, permease protein [Brucella ovis
           ATCC 25840]
          Length = 365

 Score =  276 bits (705), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 155/369 (42%), Positives = 225/369 (60%), Gaps = 9/369 (2%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
           + V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI    ++ 
Sbjct: 1   MRVIHLSGHWISQSV-HLVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLRQRL 59

Query: 66  ---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
              H  ++L+GV      L   +     + +   + +  FF+ +F N+   +G  ++   
Sbjct: 60  AAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAVISMF 116

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           ND     HILG  I                + +++ QM  +GV  +P+++L+S + GA+I
Sbjct: 117 NDFKMAMHILGATIRGAQLKYGRGNGIP--IAAIVTQMDRMGVGAIPIIVLMSTIVGAII 174

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEI SMK+ EE D
Sbjct: 175 AQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEISSMKMREETD 234

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F SR H
Sbjct: 235 ALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISRLH 294

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI++D 
Sbjct: 295 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 354

Query: 363 LFAIFYFAI 371
           LFA+FY AI
Sbjct: 355 LFAMFYAAI 363


>gi|159184854|ref|NP_354638.2| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|159140135|gb|AAK87423.2| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
          Length = 386

 Score =  274 bits (700), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 166/374 (44%), Positives = 232/374 (62%), Gaps = 18/374 (4%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF-- 61
            G + +  +G+W++  +S I + +   I KS  +    +DLSA+  IDT GA +I     
Sbjct: 23  GGGSRYVLSGSWRNSNLSGIFESLDR-IEKSKPASPVDIDLSAVEAIDTTGAWIIQRLRK 81

Query: 62  -MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
            +E     + L G +  IE +        + ++  +   R       + +   IG+ +V+
Sbjct: 82  DLEASGATVTLTG-NDRIEDVIG--QLPDKAEMDVEPVAREGL---VERIFAPIGQAVVQ 135

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLS---LIRQMYYVGVSGVPVVILISFV 177
              D  +  +ILG  +       A     +G  +S   ++ Q+ ++GV  VP+++L+SF+
Sbjct: 136 NGADFLAGMYILGSAVRG-----AQMKLGRGRGVSPAAIVNQIDHMGVRAVPIIMLMSFL 190

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            GA+IAQQGAFQL  FGAE+F +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+
Sbjct: 191 IGAIIAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKM 250

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EEIDA++ +GL+ V +L+ PR+ AL I+LPLLTILANF+A+ GA+IV   Y  I F VF
Sbjct: 251 REEIDALKVIGLNPVGVLVFPRLVALTIALPLLTILANFAALFGAAIVALAYSGITFEVF 310

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            SR H     + I  G+IKAPFMA  IGIVA  EG  VG  + SLGK VT+ VV+SI +V
Sbjct: 311 LSRLHGAVEESTIAAGMIKAPFMALIIGIVAAVEGMKVGGSAESLGKHVTSSVVKSIFVV 370

Query: 358 IIIDSLFAIFYFAI 371
           I++D LFAIFY AI
Sbjct: 371 ILVDGLFAIFYAAI 384


>gi|239831972|ref|ZP_04680301.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
 gi|239824239|gb|EEQ95807.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
          Length = 391

 Score =  273 bits (698), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 159/377 (42%), Positives = 227/377 (60%), Gaps = 17/377 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
             +G+   R  G W S  ++ + DD V  +  + + ++ I+D+S ++ +DT GA LI   
Sbjct: 23  EHDGVRHIRMNGRWVSQSVN-LVDDKVRRLENADKREATIIDISGVSGLDTAGAWLIERL 81

Query: 62  MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++      +++L+GV      L   +     + +   + ++ FF  SF      +G  +
Sbjct: 82  RQRLVAQQVEVQLEGVRQSWLPLMEEVGQAVERTLDIPRQKKPFFLISF---LAALGGGV 138

Query: 119 VKFINDSCSQAHILGLVISNT----GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
           V   +D     HILG  I       G    S   F     +++ QM  +GV  +P++IL+
Sbjct: 139 VSLGSDFKMAMHILGATIRGAQLKYGR--GSGIPFA----AIVTQMDRMGVGAIPIIILM 192

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           S + GA+IAQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGS
Sbjct: 193 STIVGAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGS 252

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           MK+ EE DA+  +GL+ V +L+ PR+ AL+I LPLLTI+++ +A+IGA  V W Y +I  
Sbjct: 253 MKMREETDALTVIGLNPVGVLVFPRLVALVIVLPLLTIVSDLAALIGAGGVAWFYSNISP 312

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
             F SR H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I
Sbjct: 313 DAFISRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAI 372

Query: 355 SIVIIIDSLFAIFYFAI 371
            +VI++D LFA+FY AI
Sbjct: 373 FVVIVVDGLFAMFYAAI 389


>gi|325293034|ref|YP_004278898.1| ABC transporter transmembrane protein [Agrobacterium sp. H13-3]
 gi|325060887|gb|ADY64578.1| ABC transporter, membrane spanning protein [Agrobacterium sp.
           H13-3]
          Length = 386

 Score =  273 bits (698), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 168/369 (45%), Positives = 228/369 (61%), Gaps = 18/369 (4%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
           +  +G+W++  +S I   +   I KS  +    +DLS++  IDT GA +I    E    K
Sbjct: 28  YALSGSWRNSNLSGIFARL-ENIEKSGPAGPVEIDLSSVEAIDTTGAWVIRRLREDMEAK 86

Query: 69  IKLQGVS---THIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
               GV+   T  E++  LI     K     +P         +     IG+ +V+   D 
Sbjct: 87  ----GVTVTLTGNERIEDLIGQLPDKAAMEGEPVAKVGLA--ERFFSPIGQAVVQNGADF 140

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLS---LIRQMYYVGVSGVPVVILISFVTGAVI 182
            +  +ILG  +       A     +G  +S   ++ Q+ ++GV  VP+++L+SF+ GA+I
Sbjct: 141 LAGMYILGSAVRG-----AQMKLGRGRGVSPAAIVNQIDHMGVRAVPIIMLMSFLIGAII 195

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGAFQL  FGAE+F +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EEID
Sbjct: 196 AQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREEID 255

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++ +GL+ V +L+ PR+ AL I+LPLLTILANF+A+ GA+IV   Y  I F VF SR H
Sbjct: 256 ALKVIGLNPVGVLVFPRLVALTIALPLLTILANFAALFGAAIVTLLYSGITFEVFLSRLH 315

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
                + I  G+IKAPFMA  IGIVA  EG  VG  + SLGK VT+ VV+SI +VI++D 
Sbjct: 316 GAVEESTIAAGMIKAPFMALIIGIVAAVEGMKVGGSAESLGKHVTSSVVKSIFVVILVDG 375

Query: 363 LFAIFYFAI 371
           LFAIFY AI
Sbjct: 376 LFAIFYAAI 384


>gi|13470959|ref|NP_102528.1| permease of ABC transporter [Mesorhizobium loti MAFF303099]
 gi|14021702|dbj|BAB48314.1| permease of ABC transporter [Mesorhizobium loti MAFF303099]
          Length = 395

 Score =  268 bits (684), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 157/373 (42%), Positives = 225/373 (60%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            E G+    F+G W +  ++ I  D+   I K     +  +DLS I +IDT GA LI   
Sbjct: 27  EEAGVLGCAFSGIWTTRTVALIDADM-RKIEKRSGFKTLALDLSKIEKIDTAGAWLIDRL 85

Query: 62  M---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
           +   EK + +++LQG S     L   +    R++     P R    N        +G+++
Sbjct: 86  VSAFEKKNVEVRLQGQSEIASILLDAVGEAVRRE-PESGPARP--PNIIIRALEAVGRRV 142

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
            +  +D  +  +ILG  I          +       ++  Q+  +GV  +PVV+L+S + 
Sbjct: 143 YEMRDDFLASMNILGATIRGAQMKLGRGHAVNP--AAIFNQIDRMGVGAIPVVVLMSAIV 200

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA++AQQGA+QLS FGA+IF +DL+ +L LRE+GVL+TA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 201 GAIVAQQGAYQLSYFGADIFVVDLVGVLILRELGVLMTAIMIAGRSGSAITAEIGSMKMR 260

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE+DA++ +GL+ + +L+ PR+ AL+I+LP LTI+ANF+A+ G  +  W Y DIP A F 
Sbjct: 261 EEVDALKVIGLNPIGVLVFPRLVALVIALPCLTIIANFAALGGGIVAAWLYSDIPPAAFI 320

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
            R      L+ IF GLIKAPFMA  IG +A  EG  VG  + SLG+ VT  VV+SI +VI
Sbjct: 321 DRLRVAIDLSTIFAGLIKAPFMAMIIGTIASVEGMKVGGSAESLGQHVTASVVKSIFVVI 380

Query: 359 IIDSLFAIFYFAI 371
           I+D LFA+FY AI
Sbjct: 381 ILDGLFAMFYAAI 393


>gi|182680563|ref|YP_001834709.1| hypothetical protein Bind_3668 [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182636446|gb|ACB97220.1| protein of unknown function DUF140 [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 377

 Score =  264 bits (674), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 152/370 (41%), Positives = 224/370 (60%), Gaps = 19/370 (5%)

Query: 9   FRFAGNWK---SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
           F  AG+W    S  +   A D++ A+ K+     A+ +L+ +  +DT GA LI    ++ 
Sbjct: 18  FSLAGHWTLEWSKGLESAAADLLKALGKA---RKAVFNLAGVERLDTAGAWLI----DRT 70

Query: 66  HGKIKLQGVSTHIEQLFS----LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
              +  +GVST ++ +      L    H +     K Q + F   F       GK +V+ 
Sbjct: 71  RRNLSERGVSTELDHVRPEYGILFQEAHFRTFPEPKRQNASF---FVAPLVETGKTVVEA 127

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             ++      LG  I++  +       F+G  +SL+ Q+  +G+  VP++ LI+F+ G +
Sbjct: 128 GRETLRGMSFLGEAIASLAQSFVQRQHFRG--ISLVYQIETIGLRSVPIITLINFLVGCI 185

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +AQQG FQL +FGA  F++DL+ IL LRE+GVLLT++MIAGRSGSAI AEIGSMK+ EEI
Sbjct: 186 VAQQGLFQLRRFGASTFAVDLLGILTLRELGVLLTSIMIAGRSGSAITAEIGSMKMREEI 245

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  MGL  + +LI PR+ AL+ISLPLLT +A+ +A+ G  +V + Y  I    F +R 
Sbjct: 246 DALTVMGLRPIEVLIVPRLLALVISLPLLTFIADMAALAGGLLVSYSYGGIQPVAFLNRL 305

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           H   +L   +TGLIKAPFMA  IG++A  EGFAV   + SLG++VTT VV+SI +VI++D
Sbjct: 306 HDAISLHTFYTGLIKAPFMALVIGLIAAVEGFAVEGSAESLGRQVTTSVVKSIFMVIVLD 365

Query: 362 SLFAIFYFAI 371
            LFA+F+  I
Sbjct: 366 GLFAMFFAGI 375


>gi|319783795|ref|YP_004143271.1| hypothetical protein Mesci_4108 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317169683|gb|ADV13221.1| protein of unknown function DUF140 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 395

 Score =  263 bits (672), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 153/373 (41%), Positives = 224/373 (60%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            E+G+    F+G W +  ++ + D  +  I K     +  +D+S I ++DT GA LI   
Sbjct: 27  EEDGVLGCAFSGIWTTRTVA-LVDADMRKIEKRSGFKTLALDVSKIEKMDTAGAWLIDRL 85

Query: 62  MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
           +  +  K   I++QG S     L   +    R++     P R    N        +G+++
Sbjct: 86  VSAFEKKGVEIQMQGQSEIASILLEAVGEAVRRE-PESGPVRP--PNIVIRALEAVGRRV 142

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
            +  +D  +  +ILG  I          +       ++  Q+  +GV  +PVV+L+S + 
Sbjct: 143 YEMRDDFLASMNILGATIRGAQMKLGRGHAVN--PAAIFNQIDRMGVGAIPVVVLMSAIV 200

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA++AQQGA+QLS FGA+IF +DL+ +L LRE+GVL+TA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 201 GAIVAQQGAYQLSYFGADIFVVDLVGVLILRELGVLMTAIMIAGRSGSAITAEIGSMKMR 260

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE+DA++ +GL+ + +L+ PR+ AL+I+LP LTI+ANF+A+ G  +  W Y DIP A F 
Sbjct: 261 EEVDALKVIGLNPIGVLVFPRLVALVIALPCLTIIANFAALGGGILAAWLYSDIPPAAFI 320

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
            R      L+ IF GLIKAPFMA  IG +A  EG  VG  + SLG+ VT  VV+SI +VI
Sbjct: 321 DRLRVAIDLSTIFAGLIKAPFMAMIIGTIASVEGMKVGGSAESLGQHVTASVVKSIFVVI 380

Query: 359 IIDSLFAIFYFAI 371
           I+D LFA+FY AI
Sbjct: 381 ILDGLFAMFYAAI 393


>gi|260463968|ref|ZP_05812164.1| protein of unknown function DUF140 [Mesorhizobium opportunistum
           WSM2075]
 gi|259030343|gb|EEW31623.1| protein of unknown function DUF140 [Mesorhizobium opportunistum
           WSM2075]
          Length = 395

 Score =  262 bits (670), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 157/373 (42%), Positives = 224/373 (60%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            E G+    F+G W +  ++ I  D+   I K     +  +DLS I +IDT GA LI   
Sbjct: 27  EEGGVLGCAFSGVWTTRTVALIDADM-RKIEKRSGFKTLALDLSKIEKIDTAGAWLIDRL 85

Query: 62  M---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
           +   EK + +++LQG S     L   +    R++     P R    N        +G+++
Sbjct: 86  VSVFEKKNVEVQLQGRSEIASILLDAVGEAVRRE-PESGPARP--PNIVLRALEAVGRRV 142

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
            +  +D  +  +ILG  I          +       ++  Q+  +GV  +PVV+L+S + 
Sbjct: 143 YEMRDDFLASMNILGATIRGAQMKLGRGHAVNP--AAIFNQIDRMGVGAIPVVVLMSAIV 200

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA++AQQGA+QLS FGA+IF +DL+ +L LRE+GVL+TA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 201 GAIVAQQGAYQLSYFGADIFVVDLVGVLILRELGVLMTAIMIAGRSGSAITAEIGSMKMR 260

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE+DA++ +GL+ + +L+ PR+ AL+I+LP LTI+ANF+A+ G     W Y DIP A F 
Sbjct: 261 EEVDALKVIGLNPIGVLVFPRLVALVIALPCLTIIANFAALGGGIAAAWLYSDIPPAAFL 320

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
            R      L+ IF GLIKAPFMA  IG +A  EG  VG  + SLG+ VT  VV+SI +VI
Sbjct: 321 DRLRVAIDLSTIFAGLIKAPFMAMIIGTIASVEGMKVGGSAESLGQHVTASVVKSIFVVI 380

Query: 359 IIDSLFAIFYFAI 371
           I+D LFA+FY AI
Sbjct: 381 ILDGLFAMFYAAI 393


>gi|114707109|ref|ZP_01440007.1| permease of ABC transporter [Fulvimarina pelagi HTCC2506]
 gi|114537305|gb|EAU40431.1| permease of ABC transporter [Fulvimarina pelagi HTCC2506]
          Length = 394

 Score =  261 bits (667), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 143/375 (38%), Positives = 229/375 (61%), Gaps = 11/375 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
             G  V   AG+W +  I  I  D+       + +D A+ DLS + +IDT GA ++    
Sbjct: 27  RGGTLVLEAAGDWLARTIGSIESDLERTARADLGADVAM-DLSRVGQIDTAGAFVLERLK 85

Query: 63  EKYHGK---IKLQGVSTHIEQLFSLI-SFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
                K   ++++G++     LF+ + S   R++   Q+ +     N+       +G  +
Sbjct: 86  RDLRAKREHVEVEGLAERNTALFAAVGSAMDRERPVRQRERSKILTNAV----IAVGSFV 141

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ++  +  +++G  +   G   +   + +    ++  Q+  +GV  +P+++LI+F+ 
Sbjct: 142 IGIKDELVNGLNLIGGAMYGAGSRISGRTQSR--PAAIFNQIDQMGVKAIPIIVLITFLV 199

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G +IAQQGAFQL ++G E+++++L+SIL LREIGVLL A+MIAGRSGSAI AEIGSMK+ 
Sbjct: 200 GGIIAQQGAFQLRRYGGEVYAVNLISILVLREIGVLLAAIMIAGRSGSAICAEIGSMKMR 259

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE+DA+  +GL+ + +L+ PR+ AL I+LPLLT++AN +A++G +I +  Y DI F  F 
Sbjct: 260 EEVDALHVIGLNPIGVLVFPRLVALSIALPLLTVIANLAALVGGAITLRIYSDISFLNFL 319

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
                +  L  +F+GL+KAPFMA  IG+VA  EG  VG  + SLG +VT  VV+SI +VI
Sbjct: 320 QGLQQSIDLFTVFSGLLKAPFMAILIGLVAANEGMKVGGSAESLGLRVTAAVVKSIFLVI 379

Query: 359 IIDSLFAIFYFAIGI 373
           ++D LFAIFY +IG+
Sbjct: 380 VMDGLFAIFYASIGL 394


>gi|153009437|ref|YP_001370652.1| hypothetical protein Oant_2107 [Ochrobactrum anthropi ATCC 49188]
 gi|151561325|gb|ABS14823.1| protein of unknown function DUF140 [Ochrobactrum anthropi ATCC
           49188]
          Length = 391

 Score =  260 bits (664), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 156/373 (41%), Positives = 227/373 (60%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G    R +G W S  ++ + DD + ++ K+ +  + I+D+S ++ +DT GA LI   
Sbjct: 23  EQDGARHIRLSGRWVSQSVN-LVDDKMRSLEKTDEHKATIIDVSGVSGLDTAGAWLIERL 81

Query: 62  MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++   K    +L+GV      L   +     + +   + ++ FF+ SF      +G  +
Sbjct: 82  RQRLVAKSADAQLEGVRQSWLPLMEEVGQAVERTLDIPRQKKPFFFISF---LAALGGGV 138

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ND     HILG  I                + +++ QM  +GV  +P++IL+S + 
Sbjct: 139 ISMGNDFKMAMHILGATIRGAQLKYGRGSGIP--IAAIVTQMDRMGVGAIPIIILMSTIV 196

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL++ LPLLTI+++ +A+IGA  V W Y +I    F 
Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVVLPLLTIISDLAALIGAGGVAWFYSNISPDAFI 316

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 377 VVDGLFAMFYAAI 389


>gi|15965586|ref|NP_385939.1| hypothetical protein SMc00174 [Sinorhizobium meliloti 1021]
 gi|307302706|ref|ZP_07582462.1| protein of unknown function DUF140 [Sinorhizobium meliloti BL225C]
 gi|307318554|ref|ZP_07597988.1| protein of unknown function DUF140 [Sinorhizobium meliloti AK83]
 gi|15074767|emb|CAC46412.1| Probable ABC transporter [Sinorhizobium meliloti 1021]
 gi|306895894|gb|EFN26646.1| protein of unknown function DUF140 [Sinorhizobium meliloti AK83]
 gi|306903070|gb|EFN33661.1| protein of unknown function DUF140 [Sinorhizobium meliloti BL225C]
          Length = 379

 Score =  258 bits (658), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 159/366 (43%), Positives = 223/366 (60%), Gaps = 20/366 (5%)

Query: 11  FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK 70
           F+G+W+  E +E     +  + K     S   D S IT +DT GA +I  FM     +++
Sbjct: 27  FSGDWRH-ETAEAMAAKLKRLEKPAGGQSEF-DFSGITRMDTAGAWIIRRFMNGTADEVR 84

Query: 71  LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS-FKNLHYHIGKKIVKFINDSCSQA 129
             G   + E + +L      K+++  +P+ S      F+ L   +G+  V    D+ +  
Sbjct: 85  FTGGERYAELVRAL-----PKQLR--RPEESATRMPLFQRLFTPVGELTVSIWTDTVAAM 137

Query: 130 HILGLVISNT----GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            ILG  +       G     S        +++ Q+  +GV   P++ L+SF+ GA+IAQQ
Sbjct: 138 FILGSAVRGAQMKLGRHAGVSPA------AIVHQIDRMGVMATPIITLMSFLIGAIIAQQ 191

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           GAFQL  FGAEIF +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EE+DA++
Sbjct: 192 GAFQLRSFGAEIFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREEVDALK 251

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MGL  V +L+ PR+ AL I LPLLTI+ANF+A+ GA++V W Y DI    F +R     
Sbjct: 252 VMGLSPVGVLVFPRLVALTIVLPLLTIIANFAALAGAAMVAWTYSDITIPTFLARLQEAV 311

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
             +++  G+IKAPFMA  IG+VA  EG  VG  + SLG++VT+ VV+SI +VI+ID LFA
Sbjct: 312 DFSSVAAGMIKAPFMALIIGVVAAVEGLKVGGSAESLGRRVTSSVVKSIFVVILIDGLFA 371

Query: 366 IFYFAI 371
           +FY AI
Sbjct: 372 MFYAAI 377


>gi|163759630|ref|ZP_02166715.1| ABC transporter, membrane spanning protein [Hoeflea phototrophica
           DFL-43]
 gi|162283227|gb|EDQ33513.1| ABC transporter, membrane spanning protein [Hoeflea phototrophica
           DFL-43]
          Length = 428

 Score =  256 bits (655), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 152/362 (41%), Positives = 229/362 (63%), Gaps = 10/362 (2%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK---I 69
           G+W+   I+ +  ++ +++ K I     ++DLS ++  DT GA L+   M    G+   +
Sbjct: 72  GDWRHAAIAGVYGEL-LSVQKKISGADLVIDLSDLSNFDTAGAWLVRKTMVVAKGQGASV 130

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
           +++G S  +  L S I      + +    +R+     F+ +   +G+ + +  +D  +  
Sbjct: 131 EIEGASKPVSGLLSAIP-DPADRAEVAATERAPL---FQRIFAPVGRALYELFDDLIASM 186

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
           +ILG  +         S        +++ Q+ ++GV  VP+++L+SF+ GA+IAQQGAFQ
Sbjct: 187 YILGSAVRGAQLKLDRSAGISP--AAIVTQIDHMGVRAVPIIMLMSFLIGAIIAQQGAFQ 244

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L  FGAE+F +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EE+DA++ +GL
Sbjct: 245 LRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREEVDALKVIGL 304

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
           + V +L+ PR+ AL ++LPLLT++ANF+A+ GA+ V W Y  I   VF SR      +  
Sbjct: 305 NPVGVLVFPRLVALTVALPLLTVVANFAALAGAAAVAWSYSGITPDVFTSRLREAIDMTT 364

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           + +G+IKAPFMA  IGIVA  EG  VG  + SLG++VT  VV+SI +VI++D LFAIFY 
Sbjct: 365 VASGMIKAPFMALIIGIVASVEGMKVGGSAESLGRRVTASVVKSIFVVILVDGLFAIFYA 424

Query: 370 AI 371
           AI
Sbjct: 425 AI 426


>gi|150396764|ref|YP_001327231.1| hypothetical protein Smed_1554 [Sinorhizobium medicae WSM419]
 gi|150028279|gb|ABR60396.1| protein of unknown function DUF140 [Sinorhizobium medicae WSM419]
          Length = 379

 Score =  256 bits (654), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 156/365 (42%), Positives = 223/365 (61%), Gaps = 18/365 (4%)

Query: 11  FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK 70
           F+G+W+  E +E     +  + K     S   D S IT +DT GA +I  FM     +++
Sbjct: 27  FSGDWRH-ETAEAMSAKLKRLGKPAGGQSEF-DFSGITAMDTAGAWIIRRFMNGTADEVR 84

Query: 71  LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAH 130
             G   + E + +L      K++++ + + +     F+ L   +G+  V    D+ +  +
Sbjct: 85  FAGSDRYAELILAL-----PKQLRSPEGETAR-APLFQRLFAPVGELTVSIWTDTVAAMY 138

Query: 131 ILGLVISNT----GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           ILG  +       G     S        +++ Q+  +GV   P++ L+SF+ GA+IAQQG
Sbjct: 139 ILGSAVRGAQMKLGRHAGVSPA------AIVHQIDRMGVMATPIITLMSFLIGAIIAQQG 192

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           AFQL  FGAEIF +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EE+DA++ 
Sbjct: 193 AFQLRSFGAEIFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREEVDALKV 252

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MGL  + +L+ PR+ AL I LPLLTI+ANF+A+ GA++V W Y  I    F +R      
Sbjct: 253 MGLSPIGVLVFPRLVALTIVLPLLTIIANFAALAGAAMVAWAYSGITIPTFLARLQEAVD 312

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
            +++  G+IKAPFMA  IG+VA  EG  VG  + SLG++VT+ VV+SI +VI+ID LFAI
Sbjct: 313 FSSVAAGMIKAPFMALIIGVVAAVEGLKVGGSAESLGRRVTSSVVKSIFVVILIDGLFAI 372

Query: 367 FYFAI 371
           FY AI
Sbjct: 373 FYAAI 377


>gi|209885947|ref|YP_002289804.1| ABC transporter permease protein [Oligotropha carboxidovorans OM5]
 gi|209874143|gb|ACI93939.1| ABC transporter permease protein [Oligotropha carboxidovorans OM5]
          Length = 377

 Score =  253 bits (647), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 146/365 (40%), Positives = 219/365 (60%), Gaps = 11/365 (3%)

Query: 12  AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA---ELIMYFMEKYHGK 68
           AG+W + ++S +   V  A   +  + +  +D+SA+ EIDTIGA   E ++    +   +
Sbjct: 21  AGSWTASQVSALEPAVEAATRTASGARALQLDMSAVNEIDTIGAWLLERMIRHARQAGSE 80

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
           IK  G+S   E+   LI      +  N  P      N      Y IG+  V  + +    
Sbjct: 81  IKTVGIS---ERFAGLI---EELRSANLNPPVYEKQNPLLLKLYQIGQSTVSSLQELLIF 134

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             +LG + +          + +  L S I Q++ VG   VP+++LI+F+ GA+IAQQG F
Sbjct: 135 IDMLGRLGTVLARVILHPRRLR--LTSTIYQLHKVGWQAVPIIVLITFLIGAIIAQQGIF 192

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
              +FGA+ + +D++ IL LREIGVL+ A+M+AGRSGSA  AE+GSMK+ EEIDA+ TMG
Sbjct: 193 HFRKFGADAYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMREEIDALTTMG 252

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD + +LI PR+ ALII+LP+LT + + +A+ G  ++ W Y D+  A F +R H   ++ 
Sbjct: 253 LDPLEVLILPRVIALIIALPILTFIGSIAALYGGGLISWLYGDMMPATFIARLHEAVSVT 312

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   GLIKAPFMA  IGIVA  EG  V   + SLG++ TT VV+SI +VI++D LFA+F+
Sbjct: 313 HFEVGLIKAPFMALVIGIVASSEGLRVKGSAESLGRQTTTSVVKSIFLVIVLDGLFAVFF 372

Query: 369 FAIGI 373
            +IG+
Sbjct: 373 ASIGM 377


>gi|90417915|ref|ZP_01225827.1| possible permease protein, ABC-type transporter [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90337587|gb|EAS51238.1| possible permease protein, ABC-type transporter [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 377

 Score =  253 bits (647), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 147/376 (39%), Positives = 225/376 (59%), Gaps = 13/376 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
            +G  V R +G+W +  +  + D V  A    +     +VD   +  IDT GA L+   +
Sbjct: 10  RDGGLVLRASGDWLARTVGSVEDTVAEAGAADL-GRQVVVDCGDVARIDTAGALLLEKLV 68

Query: 63  EKY--HGK-IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ-RSFFYNSFKNLHYHIGKKI 118
                +G+ ++L+ VS   + LF ++    RK +  ++PQ      N   +L    G+  
Sbjct: 69  RGLGANGRDVRLEAVSERDQPLFDVV----RKALDRERPQPEKRKTNRILDLVAATGRGS 124

Query: 119 VKFINDSCSQAHILG-LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           V   ++     +I+G  ++         +      + + + QM   G+  VP++ L+SF+
Sbjct: 125 VAVKDEIVVALNIIGGAMVGGVQRLTGKTQIRPAAIFAQVEQM---GLRAVPIIFLMSFL 181

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            GA+IAQQGAFQL +FG E+++++L +IL LREIGVLLTA+MIAGRSGSAI AEIGSMK+
Sbjct: 182 IGAIIAQQGAFQLRRFGGELYAVNLAAILILREIGVLLTAIMIAGRSGSAITAEIGSMKM 241

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EEIDA+  +GL+ + +L+ PR+ AL+I LPLL  +AN + ++GA + +  Y DI FA F
Sbjct: 242 REEIDALHVIGLNPIGVLVFPRLVALVIVLPLLAFIANLAGLLGAMLTLNIYSDISFASF 301

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                 +  +  +F+G+IKAPFMA  IG++A  EG  VG  + SLG +VT  VV+SI +V
Sbjct: 302 GQGVQYSVDMFTVFSGVIKAPFMAVMIGLIASAEGMKVGGSAESLGLRVTASVVKSIFLV 361

Query: 358 IIIDSLFAIFYFAIGI 373
           I++D LFAIFY +IG+
Sbjct: 362 ILMDGLFAIFYASIGL 377


>gi|218679258|ref|ZP_03527155.1| putative transmembrane component of ABC transporter [Rhizobium etli
           CIAT 894]
          Length = 281

 Score =  252 bits (643), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 129/217 (59%), Positives = 170/217 (78%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           S++ Q+ ++GV  VP+++L+SF+ GA+IAQQGAFQL  FGAE+F +DL+ ILQLREIGVL
Sbjct: 63  SIVNQIDHMGVRAVPIILLMSFLIGAIIAQQGAFQLRYFGAEVFVVDLVGILQLREIGVL 122

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           LT++MIAGRSGSAI AEIGSMK+ EEIDA++ MGL+ + +LI PR+ AL I+LPLLT+LA
Sbjct: 123 LTSIMIAGRSGSAITAEIGSMKMREEIDALKVMGLNPIGVLIFPRLVALTIALPLLTVLA 182

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
           NF+++ GA+ V W Y  I FA F SR H   TL+ + +G+IKAPFMA  IGIVA  EG  
Sbjct: 183 NFASLAGAAAVAWGYSGITFANFLSRLHEAVTLSTVLSGMIKAPFMALVIGIVAAVEGLK 242

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           VG  + SLG+ VT  VV++I +VI++D LFA+FY AI
Sbjct: 243 VGGSAESLGQHVTASVVKAIFVVILMDGLFAMFYAAI 279


>gi|227822231|ref|YP_002826202.1| toulene ABC transporter, permease protein, putative [Sinorhizobium
           fredii NGR234]
 gi|227341231|gb|ACP25449.1| toulene ABC transporter, permease protein, putative [Sinorhizobium
           fredii NGR234]
          Length = 321

 Score =  250 bits (639), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 151/332 (45%), Positives = 211/332 (63%), Gaps = 23/332 (6%)

Query: 50  IDTIGAELIMYFME----KYHGKIKL-QGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFY 104
           +DT GA +I  FM     +  G+I    G   ++E + +L         + ++P+RS   
Sbjct: 1   MDTAGAWIIRRFMNGIGSEAGGEIHFAHGGDRYVELVRALPG-------ELRQPERSKRK 53

Query: 105 NS-FKNLHYHIGKKIVKFINDSCSQAHILGLVISNT----GEFCASSYKFKGFLLSLIRQ 159
           +  F+ L   IG+  V    D+ +  +ILG  +       G     S        +++ Q
Sbjct: 54  DPLFQRLFAPIGEVTVSIWTDTVAAMYILGSAVRGAQMKLGRHAGVSPA------AIVHQ 107

Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219
           +  +GV   P++ L+SF+ GA+IAQQGAFQL  FGAEIF +DL+ ILQLREIGVLLTA+M
Sbjct: 108 IDRMGVMATPIITLMSFLIGAIIAQQGAFQLRSFGAEIFVVDLVGILQLREIGVLLTAIM 167

Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279
           IAGRSGSAI AEIGSMK+ EE+DA++ MGL  V +L+ PR+ AL I+LPLLTI+ANF+A+
Sbjct: 168 IAGRSGSAITAEIGSMKMREEVDALKVMGLSPVGVLVFPRLVALTIALPLLTIIANFAAL 227

Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339
           +GA++V W Y  I  A F +R       +++  G+IKAPFMA  IG+VA  EG  VG  +
Sbjct: 228 VGAALVAWTYSGITVATFVARLQEAVDFSSVAAGMIKAPFMALIIGVVAAVEGLKVGGSA 287

Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
            SLG++VT+ VV+SI +VI+ID LFA+FY AI
Sbjct: 288 ESLGRRVTSSVVKSIFVVILIDGLFAMFYAAI 319


>gi|299132338|ref|ZP_07025533.1| protein of unknown function DUF140 [Afipia sp. 1NLS2]
 gi|298592475|gb|EFI52675.1| protein of unknown function DUF140 [Afipia sp. 1NLS2]
          Length = 377

 Score =  249 bits (636), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 141/363 (38%), Positives = 219/363 (60%), Gaps = 7/363 (1%)

Query: 12  AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH-GKIK 70
           AG+W + ++S +   V  AI+    +    +D+SA+ +IDTIGA L+   + + H    +
Sbjct: 21  AGSWTASQVSSLEPVVNAAIHNVSGARVLQLDMSAVDQIDTIGAWLLERMIRRVHQAGSE 80

Query: 71  LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAH 130
           ++ V  H E+   LI      +  N  P      N+     Y IG+  V  + +      
Sbjct: 81  IRTVGIH-ERFAGLID---ELRSVNLHPPVHERQNAVLLKLYQIGQSTVASLQELLVFLE 136

Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190
           +LG + S          + +  L S I Q++ VG   VP++++I+F+ GA+IAQQG F  
Sbjct: 137 MLGRLGSVLARLAFKPSRLR--LTSTIYQLHKVGWQAVPIMVMITFLIGAIIAQQGIFHF 194

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
            +FGA+ + +D++ IL LREIGVL+ A+M+AGRSGSA  AE+GSMK+ EEIDA+ TMGLD
Sbjct: 195 RKFGADAYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMREEIDALTTMGLD 254

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
            + +L+ PR+ AL+I+LP+L  + + +A+ G  ++ W Y  +  A+F +R H   ++ + 
Sbjct: 255 PLEVLVLPRVLALVIALPILAFIGSIAALYGGGLISWLYGGMSPAIFIARLHEAVSVTHF 314

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             GLIKAPFMA  IGIVA  EG  V   + SLG++ TT VV+SI +VI++D LFA+F+ +
Sbjct: 315 EVGLIKAPFMALVIGIVASSEGLRVKGSAESLGRQTTTSVVKSIFLVIVLDGLFAVFFAS 374

Query: 371 IGI 373
           IG+
Sbjct: 375 IGM 377


>gi|307945713|ref|ZP_07661049.1| ABC transporter permease protein [Roseibium sp. TrichSKD4]
 gi|307771586|gb|EFO30811.1| ABC transporter permease protein [Roseibium sp. TrichSKD4]
          Length = 382

 Score =  247 bits (631), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 139/373 (37%), Positives = 219/373 (58%), Gaps = 20/373 (5%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDS---AIVDLSAITEIDTIGAELIMYFMEK 64
           V   +G+W    ++E A+ +V    +SI  D      +D SAI  +DT GA    + + +
Sbjct: 23  VLCLSGDWTISSLAE-AERLV----ESIMLDKYRVTCLDTSAIDNLDTSGA----WLVHR 73

Query: 65  YHGKIKLQGVSTHI----EQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
             G ++ QG    +    E  F+L     R      KP++S    S        GK++V 
Sbjct: 74  LRGSLEYQGRRVELIGLTENRFNLFCQIERHHPPEYKPEKSKV--SLVGFLEATGKQVVN 131

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
              D+ +  HILG +            + +G  +++  Q     +  VP+V L+SF+ GA
Sbjct: 132 VGRDAIAMLHILGSLGVVLSTVLLQPKRLRGIAVAV--QFDRTCIGAVPIVALMSFLIGA 189

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           +I+QQG F L QFGA+I+ +DL  IL LREIGV+LTA+M+AGRSGSA  AE+G+M++ EE
Sbjct: 190 IISQQGGFYLRQFGADIYVVDLAGILVLREIGVILTAIMVAGRSGSAFTAELGAMRMQEE 249

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +DA+  +GL    +L+ PRI AL+I+LP+LT +A+ +A++GA +  W Y DIP A + ++
Sbjct: 250 VDALHVIGLSVTEVLVLPRILALMIALPVLTFIADMAALVGAGLTTWVYLDIPPAAYLTQ 309

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             +  T+  ++ G++KAPFMA  IG++A  EG  VG  + SLG+  T  VV++I +VI++
Sbjct: 310 LQAAITMKTLWVGIVKAPFMALIIGLIACVEGLKVGGSAESLGRHTTMSVVKAIFLVIVV 369

Query: 361 DSLFAIFYFAIGI 373
           D +FAIF+ +I +
Sbjct: 370 DGVFAIFFASINV 382


>gi|254502466|ref|ZP_05114617.1| conserved domain protein [Labrenzia alexandrii DFL-11]
 gi|222438537|gb|EEE45216.1| conserved domain protein [Labrenzia alexandrii DFL-11]
          Length = 382

 Score =  247 bits (630), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 141/366 (38%), Positives = 218/366 (59%), Gaps = 12/366 (3%)

Query: 11  FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEKYHG 67
            +G+W    +++ AD  +  +N + +     +D+S +  +DT GA LI      +E    
Sbjct: 26  LSGDWTVSTLAD-ADQQISKLNVA-KDKLTCIDVSEVDHLDTSGAWLIHRTRGQLEFSGR 83

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
           K++L GV+   E LF  I   H  +    +P RS F  +        G+++V+   D+ +
Sbjct: 84  KVQLTGVTPVRESLFHEIEKHHPPR---WQPDRSGF--TIVGFLEATGRQMVEVYKDTLA 138

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
             HILG +            + +   +++  Q     +  VP+V L+SF+ GA+I+QQG 
Sbjct: 139 MLHILGSLGIVLSTVLLQPKRLRSIAIAV--QFDRSCIGAVPIVALMSFLIGAIISQQGG 196

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
           F L QFGA+IF +DL  IL LREIGV+LTA+M+AGRSGSA  AE+G+M++ EE+DA+  +
Sbjct: 197 FYLRQFGADIFVVDLAGILVLREIGVILTAIMVAGRSGSAFTAELGAMRMQEEVDALHVI 256

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GL    +L+ PRI AL+I+LP+LT +A+ SA+ GA ++ W Y DIP A F ++  S  T+
Sbjct: 257 GLSVTEVLVLPRILALMIALPILTFVADISALFGAGLITWAYLDIPPAAFLTQLQSAITV 316

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
                G+IKAPFMA  +G++A  EG  V   S SLG+  T  VV++I +VI++D +FA+F
Sbjct: 317 NTFVVGIIKAPFMALIVGLIACVEGLKVEGSSESLGRHTTMAVVKAIFLVIVVDGMFAMF 376

Query: 368 YFAIGI 373
           + AIG+
Sbjct: 377 FAAIGV 382


>gi|188580085|ref|YP_001923530.1| hypothetical protein Mpop_0817 [Methylobacterium populi BJ001]
 gi|179343583|gb|ACB78995.1| protein of unknown function DUF140 [Methylobacterium populi BJ001]
          Length = 382

 Score =  245 bits (626), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 136/362 (37%), Positives = 206/362 (56%), Gaps = 12/362 (3%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA---ELIMYFMEKYHGKI 69
           G W + +   + +     I    +    +VDLS +  +DT+GA   E     +E   G++
Sbjct: 28  GRWTADQGPAV-ESASARIAAQGRRQPVLVDLSGLARLDTLGAWVLERTRAEIEAAGGRL 86

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
              G       L   +       ++  +P      N    L    G+++ +  N+  S  
Sbjct: 87  AYAGARPEHRILLGEMG------LREPEPAPRDARNPVVRLLDGTGRRVARGGNEILSGI 140

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
             LG V++  G        F+  + +L+ Q+  V + GVP+++LISF+ G ++AQQG FQ
Sbjct: 141 AFLGEVVAAGGRVARRPQTFR--MAALVNQLEQVALRGVPIIVLISFLVGGIVAQQGIFQ 198

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L +FGA+ F ++L+ +L LRE+GVLLT++M+AGRSGSA  AEIGSM++ EE+DA+R MGL
Sbjct: 199 LQRFGAQSFVVNLIGLLILRELGVLLTSIMVAGRSGSAFTAEIGSMRMREEVDALRVMGL 258

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
           D + ILI PRI AL+I LP+L  L + +A+ G  +    Y  +    F +R  +  +  +
Sbjct: 259 DPIEILILPRILALVIGLPILAFLGSLAALAGGGLTAAIYGGMTVDAFLARLQAAVSFHH 318

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              GLIKAPFMA  IGI+A  EGFAV   + SLG+ VT  VV+SI +VI++D LFA+F+ 
Sbjct: 319 FAVGLIKAPFMALTIGIIATIEGFAVEGSAESLGRHVTASVVKSIFMVIVLDGLFAVFFA 378

Query: 370 AI 371
           AI
Sbjct: 379 AI 380


>gi|170748370|ref|YP_001754630.1| hypothetical protein Mrad2831_1952 [Methylobacterium radiotolerans
           JCM 2831]
 gi|170654892|gb|ACB23947.1| protein of unknown function DUF140 [Methylobacterium radiotolerans
           JCM 2831]
          Length = 384

 Score =  245 bits (625), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 134/335 (40%), Positives = 204/335 (60%), Gaps = 15/335 (4%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYHGKIKLQG-----VSTHIEQLFSLISFTHRKKIKNQ 96
           VDLS I  +DT+GA    + +E+   +I+  G     +    E    L+     ++    
Sbjct: 58  VDLSGIERLDTLGA----WVLERTRAEIEQAGSALTYLGARPEHRI-LLGEVRLREPDAP 112

Query: 97  KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156
            P+R   +     L    G++ V+  ++  +    LG +I+  G        F+G   +L
Sbjct: 113 PPRR---HGPVVGLLDATGRRTVQGGHEFVTALAFLGELIAACGRVALRPGTFRGN--AL 167

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I Q+  V ++G P+++LISF+ G ++AQQG FQL +FGA+ F ++L+ +L LRE+GVLLT
Sbjct: 168 INQIQQVALNGTPIIVLISFLVGGIVAQQGIFQLQRFGAQTFVVNLIGLLILREMGVLLT 227

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           ++M+AGRSGSAI AEIGSM++ EE+DA+R MGLD V ILI PR+ AL+I LP+LT++ + 
Sbjct: 228 SIMVAGRSGSAITAEIGSMRMREEVDALRVMGLDPVEILIVPRVLALMIGLPMLTLIGDL 287

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           +A+ G  +    Y  +    F  R  +   + ++  GLIKAPFMA  IG++A  EGFAV 
Sbjct: 288 AALAGGGLTAMLYGGLTLDQFLVRLQAAVGVHHVMVGLIKAPFMALTIGVIATIEGFAVE 347

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
             + SLG+ VT  VV+SI +VI++D LFA+F+ AI
Sbjct: 348 GSAESLGRHVTASVVKSIFMVIVLDGLFAVFFAAI 382


>gi|218528881|ref|YP_002419697.1| hypothetical protein Mchl_0851 [Methylobacterium chloromethanicum
           CM4]
 gi|218521184|gb|ACK81769.1| protein of unknown function DUF140 [Methylobacterium
           chloromethanicum CM4]
          Length = 381

 Score =  243 bits (620), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 136/362 (37%), Positives = 207/362 (57%), Gaps = 12/362 (3%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA---ELIMYFMEKYHGKI 69
           G W + +   + +     I    ++   +VDLS +  +DT+GA   E     +E   G++
Sbjct: 27  GRWTADQGPAV-ESASARIAAQGRTQPVLVDLSGLARLDTLGAWVLERTRAEIEAAGGRL 85

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
              G       L   +     + +    PQ +   N         G+++ +  N+  S  
Sbjct: 86  AYAGARPEHRILLGEMGLREPEPV----PQDT--RNPVLRFLDTTGQRVARGGNEILSGI 139

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
             LG V++  G        F+  + +L+ Q+  V + GVP+++LISF+ G ++AQQG FQ
Sbjct: 140 AFLGEVVAAGGRVARRPQTFR--MAALVNQLEQVALRGVPIIVLISFLVGGIVAQQGIFQ 197

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L +FGA+ F ++L+ +L LRE+GVLLT++M+AGRSGSA  AEIGSM++ EE+DA+R MGL
Sbjct: 198 LQRFGAQSFVVNLIGLLILRELGVLLTSIMVAGRSGSAFTAEIGSMRMREEVDALRVMGL 257

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
           D + ILI PRI AL+I LP+L  L + +A+ G  +    Y  +    F +R  +  +  +
Sbjct: 258 DPIEILILPRILALVIGLPILAFLGSLAALAGGGLTAAIYGGMTTDAFLARLQAAVSFHH 317

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              GLIKAPFMA  IGI+A  EGFAV   + SLG+ VT  VV+SI +VI++D LFA+F+ 
Sbjct: 318 FAVGLIKAPFMALTIGIIATIEGFAVEGSAESLGRHVTASVVKSIFMVIVLDGLFAVFFA 377

Query: 370 AI 371
           AI
Sbjct: 378 AI 379


>gi|240137395|ref|YP_002961866.1| putative ABC transporter, permease [Methylobacterium extorquens
           AM1]
 gi|240007363|gb|ACS38589.1| Putative ABC transporter, permease [Methylobacterium extorquens
           AM1]
          Length = 382

 Score =  243 bits (619), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 135/364 (37%), Positives = 207/364 (56%), Gaps = 16/364 (4%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA---ELIMYFMEKYHGKI 69
           G W + +   + +     I    ++   +VDLS +  +DT+GA   E     +E   G++
Sbjct: 28  GRWTADQGPAV-ESASARIAAQGRTQPVLVDLSGLARLDTLGAWVLERTRAEIEAAGGRL 86

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKN--QKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
              G       L   +     + +    + P   F   +        G+++ +  N+  S
Sbjct: 87  AYAGARPEHRILLGEMGLREPEPVPQDTRNPALRFLDTT--------GQRVARGGNEILS 138

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               LG V++  G        F+  + +L+ Q+  V + GVP+++LISF+ G ++AQQG 
Sbjct: 139 GIAFLGEVVAAGGRVARRPQTFR--MAALVNQLEQVALRGVPIIVLISFLVGGIVAQQGI 196

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
           FQL +FGA+ F ++L+ +L LRE+GVLLT++M+AGRSGSA  AEIGSM++ EE+DA+R M
Sbjct: 197 FQLQRFGAQSFVVNLIGLLILRELGVLLTSIMVAGRSGSAFTAEIGSMRMREEVDALRVM 256

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GLD + ILI PRI AL+I LP+L  L + +A+ G  +    Y  +    F +R  +  + 
Sbjct: 257 GLDPIEILILPRILALVIGLPILAFLGSLAALAGGGLTAAIYGGMTTDAFLARLQAAVSF 316

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   GLIKAPFMA  IGI+A  EGFAV   + SLG+ VT  VV+SI +VI++D LFA+F
Sbjct: 317 HHFAVGLIKAPFMALTIGIIATIEGFAVEGSAESLGRHVTASVVKSIFMVIVLDGLFAVF 376

Query: 368 YFAI 371
           + AI
Sbjct: 377 FAAI 380


>gi|163850324|ref|YP_001638367.1| hypothetical protein Mext_0891 [Methylobacterium extorquens PA1]
 gi|254559575|ref|YP_003066670.1| ABC transporter permease [Methylobacterium extorquens DM4]
 gi|163661929|gb|ABY29296.1| protein of unknown function DUF140 [Methylobacterium extorquens
           PA1]
 gi|254266853|emb|CAX22652.1| Putative ABC transporter, permease [Methylobacterium extorquens
           DM4]
          Length = 382

 Score =  243 bits (619), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 135/364 (37%), Positives = 207/364 (56%), Gaps = 16/364 (4%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA---ELIMYFMEKYHGKI 69
           G W + +   + +     I    ++   +VDLS +  +DT+GA   E     +E   G++
Sbjct: 28  GRWTADQGPAV-ESASARIAAQGRTQPVLVDLSGLARLDTLGAWVLERTRAEIEAAGGRL 86

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKN--QKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
              G       L   +     + +    + P   F   +        G+++ +  N+  S
Sbjct: 87  AYAGARPEHRILLGEMGLREPEPVPQDTRNPALRFLDTT--------GQRVARGGNEILS 138

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               LG V++  G        F+  + +L+ Q+  V + GVP+++LISF+ G ++AQQG 
Sbjct: 139 GIAFLGEVVAAGGRVARRPQTFR--MAALVNQLEQVALRGVPIIVLISFLVGGIVAQQGI 196

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
           FQL +FGA+ F ++L+ +L LRE+GVLLT++M+AGRSGSA  AEIGSM++ EE+DA+R M
Sbjct: 197 FQLQRFGAQSFVVNLIGLLILRELGVLLTSIMVAGRSGSAFTAEIGSMRMREEVDALRVM 256

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GLD + ILI PRI AL+I LP+L  L + +A+ G  +    Y  +    F +R  +  + 
Sbjct: 257 GLDPIEILILPRILALVIGLPILAFLGSLAALAGGGLTAAIYGGMTTDAFLARLQAAVSF 316

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   GLIKAPFMA  IGI+A  EGFAV   + SLG+ VT  VV+SI +VI++D LFA+F
Sbjct: 317 HHFAVGLIKAPFMALTIGIIATIEGFAVEGSAESLGRHVTASVVKSIFMVIVLDGLFAVF 376

Query: 368 YFAI 371
           + AI
Sbjct: 377 FAAI 380


>gi|118588764|ref|ZP_01546172.1| hypothetical protein SIAM614_18699 [Stappia aggregata IAM 12614]
 gi|118438750|gb|EAV45383.1| hypothetical protein SIAM614_18699 [Stappia aggregata IAM 12614]
          Length = 382

 Score =  239 bits (610), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 139/338 (41%), Positives = 205/338 (60%), Gaps = 16/338 (4%)

Query: 42  VDLSAITEIDTIGAELIMYFMEK--YHG-KIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
           +D+S I  +DT GA LI     +  + G K+ L GVS   + LF  I   H     + KP
Sbjct: 55  IDVSRIEHLDTSGAWLIHRTRGRLEFEGRKVGLSGVSPVRKTLFEEIENHHPP---SWKP 111

Query: 99  QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILG---LVISNTGEFCASSYKFKGFLLS 155
               F  S        G+++V   +D+ +  HILG   LV+S          + +   +S
Sbjct: 112 DPGGF--SIAGFLEATGRQMVDVYHDALAMLHILGSLGLVLSTV---LLQPKRLRS--IS 164

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +  Q     +  VP+V L+SF+ GA+I+QQG F L QFGA+IF +DL  IL LREIGV+L
Sbjct: 165 IAVQFDRSCIGAVPIVALMSFLIGAIISQQGGFYLRQFGADIFVVDLAGILVLREIGVIL 224

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA+M+AGRSGSA  AE+G+M++ EE+DA+  +GL    +L+ PRI AL+I+LP+LT +++
Sbjct: 225 TAIMVAGRSGSAFTAELGAMRMQEEVDALHVIGLSVTEVLVLPRILALMIALPILTFISD 284

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
            +A+ G+ +V W Y DIP A F ++  +  T+  +  GL+KAPFMA  +G++A  EG  V
Sbjct: 285 LAALFGSGMVTWAYLDIPPAAFLTQLQAAITINTLVVGLVKAPFMALIVGLIACVEGLKV 344

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
              S SLG+  T  VV++I +VI++D  FAIF+ AIG+
Sbjct: 345 EGSSESLGRHTTMSVVKAIFLVIVVDGFFAIFFAAIGV 382


>gi|148257023|ref|YP_001241608.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146409196|gb|ABQ37702.1| putative ABC transporter (permease protein) [Bradyrhizobium sp.
           BTAi1]
          Length = 378

 Score =  239 bits (609), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 139/372 (37%), Positives = 220/372 (59%), Gaps = 18/372 (4%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH-- 66
            R +G+W S  ++E+ +    A  K   + +  +DL A++EIDT+G    ++ +EK    
Sbjct: 18  LRPSGSWVSLNVTELENLTRSASGKVGNAKAVKLDLGAVSEIDTVG----VWLLEKLSRS 73

Query: 67  ----GK-IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
               G+ +++ GV+ +   L   +   +R+ I    P+++       +L    G+  +  
Sbjct: 74  AAAGGRLVEMTGVAENYVGLVEEVRQVNRRDIA-PPPRQNPIVAKLTDL----GRSTLGA 128

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             D      +L  +        A     +  + SL+ QMY +G   +P+V+LI+F+ GA+
Sbjct: 129 ARDVTVFLDMLAALSLALVRTLARPRSLR--VTSLVYQMYRIGWQAIPIVVLITFLIGAI 186

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IAQQG F   +FGAE + +D++ IL LRE+GVL+ A+M+AGRSGSA  AE+GSMK+ EEI
Sbjct: 187 IAQQGIFHFRRFGAESYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAELGSMKMREEI 246

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+ TMGLD V +LI PRI ALI++LP+L  + + +A+ G  +V   Y  +  A+F +R 
Sbjct: 247 DALVTMGLDPVEVLILPRIVALILTLPILAFIGSMAALYGGGLVAQLYGGMGPAIFIARL 306

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           H   ++ +   G+ KAPFMA  IGIVA  EG  V   + SLG++ TT VV+SI +VI++D
Sbjct: 307 HDAVSVTHFEVGMWKAPFMALVIGIVACSEGLRVKGSAESLGQQTTTSVVKSIFLVIVLD 366

Query: 362 SLFAIFYFAIGI 373
            LFA+F+ +IG+
Sbjct: 367 GLFAVFFASIGL 378


>gi|158423837|ref|YP_001525129.1| hypothetical protein AZC_2213 [Azorhizobium caulinodans ORS 571]
 gi|158330726|dbj|BAF88211.1| protein of unknown function [Azorhizobium caulinodans ORS 571]
          Length = 408

 Score =  239 bits (609), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 138/360 (38%), Positives = 208/360 (57%), Gaps = 9/360 (2%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFMEKYHGKIKL 71
           G W S E ++  +  VM +        A+ +DLS +  +DT GA L    +E+     + 
Sbjct: 55  GAWTS-EYADSLEQAVMQVASHYGEAKAVEIDLSRLDRMDTFGALL----LERLRRVWQE 109

Query: 72  QGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHI 131
           +GV   I  L    S    +++     +          +   IG+++V    D+ S  + 
Sbjct: 110 KGVEPQIVGLNPAYSVLI-EEMTRTGREPPPPERKPPGVFERIGREMVVITEDAVSLLNF 168

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G V++  G        F+    S++ QM  VG   +P++ILI+F+ G +IAQQG F   
Sbjct: 169 VGAVVAAFGRVLTRPRSFR--FTSMVNQMDRVGFRAMPIIILITFLIGCIIAQQGIFNFR 226

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           +FGA+I+ +D++ +L LRE+GVL+ ++MIAGRSGSA  AE+GSM++ EE+DA+R MG D 
Sbjct: 227 RFGADIYVVDMVGVLVLRELGVLIVSIMIAGRSGSAYTAELGSMRMREEVDALRVMGFDP 286

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V +L+ PR+ ALII LPLLT + + +A+IG  +V W Y  I   VF +R     TLA   
Sbjct: 287 VEVLVVPRLLALIICLPLLTFVGSMAAMIGGGLVAWFYGGIAPDVFINRLKDAITLAQFE 346

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
            G+IKAPFMA  IG+V   EG  VG  + SLG+  T  VV++I +VI++D LFAIF+ +I
Sbjct: 347 VGMIKAPFMAAIIGVVGCMEGLRVGGSAESLGQHTTASVVKAIFLVIVVDGLFAIFFASI 406


>gi|328543112|ref|YP_004303221.1| ABC transporter permease protein [Polymorphum gilvum SL003B-26A1]
 gi|326412858|gb|ADZ69921.1| ABC transporter permease protein [Polymorphum gilvum SL003B-26A1]
          Length = 381

 Score =  238 bits (606), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/339 (38%), Positives = 201/339 (59%), Gaps = 18/339 (5%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYHGKIK-------LQGVSTHIEQLFSLISFTHRKKIK 94
           +DLS I+ +DT GA    + + +  G+I+       L GV+   E L S +   H     
Sbjct: 54  IDLSGISVLDTSGA----WLLHRMRGRIEFAGVRVILTGVAPKYELLLSEVDAHHPPP-- 107

Query: 95  NQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLL 154
              P+R  +  S  ++    G+ +V    D  +  HILG +            + +G  +
Sbjct: 108 -WSPER--YRYSIVSVLETTGRHVVDAGKDLVAMMHILGSLSVVVAGVLFRPGRLRG--I 162

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           S+  Q     +  VP++ L+SF+ GA+IAQQG F L QFGA++F +DL  +L LREIGVL
Sbjct: 163 SIAVQFDKSCIGAVPIIALMSFLIGAIIAQQGGFYLRQFGADLFVVDLAGVLVLREIGVL 222

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           LTA+M+AGRSGSA  AE+GSMK+ EEIDA+  +GL    +LI PR+ AL++++P+LT ++
Sbjct: 223 LTAIMVAGRSGSAFTAELGSMKMQEEIDALHVIGLSVTEVLILPRLLALMVAMPVLTFVS 282

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
           + +A+ G+ +V W Y  IP A + +R     +      G++KAPFMA  IG++A  EG  
Sbjct: 283 DIAALFGSGLVTWSYLGIPPAAYMARLEEAISFQTFLVGMVKAPFMALIIGLIACVEGLK 342

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           VG  ++SLG+  T  VV++I +VI++D LFAIF+ AI +
Sbjct: 343 VGGSADSLGRHTTMSVVKAIFLVIVVDGLFAIFFAAIDV 381


>gi|115523755|ref|YP_780666.1| hypothetical protein RPE_1737 [Rhodopseudomonas palustris BisA53]
 gi|115517702|gb|ABJ05686.1| protein of unknown function DUF140 [Rhodopseudomonas palustris
           BisA53]
          Length = 382

 Score =  237 bits (604), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 142/382 (37%), Positives = 223/382 (58%), Gaps = 24/382 (6%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMY 60
            + G+   R  G+W +   + + + +   ++  +Q    + +DL+ + EIDT+GA    +
Sbjct: 15  DDAGVLQLRPGGSWTAGN-AVVLERLFEEVSPQLQGVRGLRIDLAGVQEIDTLGA----W 69

Query: 61  FMEKYHGKIKLQGVSTHI----EQLFSLISFTHR--KKIKNQKPQRSF---FYNSFKNLH 111
            +EK   +   QGVS+ +    E+   LI    +  +      P+ +F   + +    L 
Sbjct: 70  LLEKMSRRAAQQGVSSELVGVDERHAGLIDEVRQVNRNAPAPHPRGNFVLGWLDQLGRLT 129

Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171
           +    +++ F+    + A  L  V+         S +    L SL  Q+Y VG   +P++
Sbjct: 130 WASRVEVLVFLQMLGALAVALLGVLRRP-----RSLR----LTSLFYQVYRVGWQAIPIM 180

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
           +LI+F+ GA+IAQQG F   +FGAE + +D++ IL LREIGVL+ A+M+AGRSGSA  AE
Sbjct: 181 LLITFLIGAIIAQQGIFHFRKFGAESYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAE 240

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           +GSMK+ EEIDA+ TM LD V +LI PR+ ALII+LP+L+ L + +A+ G  +V W Y  
Sbjct: 241 LGSMKMREEIDALSTMDLDPVEVLILPRVLALIIALPILSFLGSMAALYGGGLVAWFYGG 300

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
           +   +F +R H   ++ +   G+IKAPFMA  IGIVA  EG  V   + SLG++ TT VV
Sbjct: 301 MSPTIFIARLHEAVSVTHFEVGIIKAPFMALVIGIVACSEGLRVKGSAESLGRQTTTSVV 360

Query: 352 QSISIVIIIDSLFAIFYFAIGI 373
           +SI  VI++D LFA+F+ +IG+
Sbjct: 361 KSIFCVIVLDGLFAVFFASIGM 382


>gi|217978940|ref|YP_002363087.1| protein of unknown function DUF140 [Methylocella silvestris BL2]
 gi|217504316|gb|ACK51725.1| protein of unknown function DUF140 [Methylocella silvestris BL2]
          Length = 379

 Score =  236 bits (603), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 148/374 (39%), Positives = 220/374 (58%), Gaps = 14/374 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           SE G+   + AG+W     ++I +     +     +  AI DL+ +  +DT GA    + 
Sbjct: 14  SEEGVR-LKLAGHWTLDACADIEEGAQALVGAGAGAKHAIFDLAGVQRMDTAGA----WL 68

Query: 62  MEKYHGKIKLQGVSTHI----EQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
           ++    ++  +GVS        ++  L+   H +  + Q P R  FY     L   +G+ 
Sbjct: 69  IDGARQQLDAKGVSADFAGGRPEIDILLKEAHFRSFE-QPPGRKGFY--IVTLLADVGES 125

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +V    D       LG V+++ G+       F+G   +L+ Q+  + + GVP+++LI+F+
Sbjct: 126 VVASGRDIYRGVEFLGEVVASIGKSVIQPAHFRG--TALVAQIETIALRGVPIIVLINFL 183

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            GA++AQQG FQL +FGA I  +DL+ IL LRE+GVLLTA+MI+GRSGSAI AE+GSMK+
Sbjct: 184 VGAIVAQQGIFQLRRFGATILVVDLIGILILRELGVLLTAIMISGRSGSAITAELGSMKM 243

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EEIDA+  MGL  + +LI+PRI ALI+SLPLLT LA+ +A+ G  +V W Y  I    F
Sbjct: 244 REEIDALVVMGLRPIDVLIAPRILALILSLPLLTFLADMAALAGGILVSWLYGGITPKSF 303

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            +       L    +GLIKAPFM   IG++A  EG AV   + SLG++VT  VV+SI +V
Sbjct: 304 IALLPEAIALRTFLSGLIKAPFMGLIIGLIACMEGLAVAGSAESLGRQVTASVVKSIFMV 363

Query: 358 IIIDSLFAIFYFAI 371
           I++D LFA+F+  I
Sbjct: 364 IVVDGLFAVFFATI 377


>gi|85716130|ref|ZP_01047106.1| ABC transporter permease protein [Nitrobacter sp. Nb-311A]
 gi|85697129|gb|EAQ35011.1| ABC transporter permease protein [Nitrobacter sp. Nb-311A]
          Length = 370

 Score =  236 bits (601), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 135/366 (36%), Positives = 213/366 (58%), Gaps = 8/366 (2%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG- 67
            R  G W +  ++ +      A  +  ++ S  +D+S ++E+DT+GA L+     +  G 
Sbjct: 12  LRPDGFWIAANVTVLEALADAAAPQVERAKSLKMDMSGLSELDTLGAWLLEKLSRQIAGH 71

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
             ++ GVS +   L   +   +R  +   K +     N        +G+       D   
Sbjct: 72  PAEIVGVSENYAGLIEEVRHVNRHNLPPPKAR-----NPVIAKVEEVGRAAWNSREDVAV 126

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              +LG +              +  L SL+ Q+Y VG   +P+++LI+F+ GA+IAQQG 
Sbjct: 127 FLQMLGSLCVALLGIIRKPRSLR--LTSLVYQLYRVGWQAIPIILLITFLIGAIIAQQGF 184

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
           F   +FGA+ + +D++ IL LRE+GVL+ A+M+AGRSGSA  AE+GSMK+ EEIDA+ TM
Sbjct: 185 FHFRKFGADSYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAELGSMKMREEIDALSTM 244

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GLD V +LI PR+ AL+++LP+LT + + +A+ G  +V W Y  +  ++F +R H   ++
Sbjct: 245 GLDPVVVLILPRVLALVLALPILTFIGSMAALYGGGLVAWFYGGMGPSIFIARLHDAVSV 304

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   G+IKAPFMA  IGIVA  EG  V   + SLGK+ TT VV+SI +VI++D LFA+F
Sbjct: 305 THFQVGMIKAPFMALVIGIVACSEGLRVKGSAESLGKQTTTSVVKSIFLVIVLDGLFAVF 364

Query: 368 YFAIGI 373
           + +IG+
Sbjct: 365 FASIGM 370


>gi|146342154|ref|YP_001207202.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146194960|emb|CAL78985.1| putative ABC transporter (permease protein) [Bradyrhizobium sp.
           ORS278]
          Length = 378

 Score =  236 bits (601), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 137/371 (36%), Positives = 215/371 (57%), Gaps = 16/371 (4%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH-- 66
            R +G+W S  ++++      A  K   +    +DL +++EIDT+GA LI     +    
Sbjct: 18  LRASGSWVSRNVTQLESLTGSACAKLGHAGIVRLDLGSVSEIDTVGAWLIEKLSRRAGVG 77

Query: 67  -GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI---GKKIVKFI 122
             ++++ GV+     L   +   +R++I    P+ +       +L        K +  F+
Sbjct: 78  GRRVEMTGVAASYSGLVDEVRQVNRREIA-PAPRPNPIVARLTDLGRSTMGAAKDVTIFL 136

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +   + +  L   +        +S         L+ QMY +G   +P+V+LI+F+ GA+I
Sbjct: 137 DMLAALSFALVRTLRRPRSLRVTS---------LVYQMYRIGWQAIPIVVLITFLIGAII 187

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQG F   +FGAE + +D++ IL LRE+GVL+ A+M+AGRSGSA  AEIGSMK+ EEID
Sbjct: 188 AQQGIFHFRRFGAESYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAEIGSMKMREEID 247

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+ TMGLD V +LI PRI ALI++LP+L  + + +A+ G  +V   Y  +   +F +R H
Sbjct: 248 ALVTMGLDPVEVLILPRIVALILTLPILAFIGSMAALYGGGLVAQLYGGMGPPIFIARLH 307

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
              ++ +   G++KAPFMA  IGIVA  EG  V   + SLG++ TT VV+SI +VI++D 
Sbjct: 308 EAISVTHFEVGMLKAPFMALVIGIVACSEGLRVKGSAESLGQQTTTSVVKSIFLVIVLDG 367

Query: 363 LFAIFYFAIGI 373
           LFAIF+ +IG+
Sbjct: 368 LFAIFFASIGM 378


>gi|146341950|ref|YP_001206998.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146194756|emb|CAL78781.1| putative ABC transporter (permease protein) [Bradyrhizobium sp.
           ORS278]
          Length = 377

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 137/375 (36%), Positives = 208/375 (55%), Gaps = 11/375 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            E      R  G W +P    +   V  A   + +S +  +D+S ++++DT GA LI   
Sbjct: 11  GEGNALALRATGAWTAPFAPALERLVADAEKLAGKSGNVSIDVSQVSKLDTFGAWLIERL 70

Query: 62  MEKYHG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
              +     + ++ G+S +     SL+    R  +    P       +   +   IG+ +
Sbjct: 71  RRSFTTGTVEARIDGLSANYA---SLVDEVRRVSLA---PGDDATNVTITGMLGQIGRSV 124

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
              +    +   +LG VI  +G        F+  L S I  +  V    VP+++LI+F+ 
Sbjct: 125 AGIVGTVAALIDMLGAVIVASGRVLVHPRSFR--LTSTIHHLEQVCWRAVPIIVLITFLI 182

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G +IAQQG F   +FGA+IF +D++ +L LREIGVLL A+MIAGRSGSA  AE+GSMK+ 
Sbjct: 183 GCIIAQQGIFHFRRFGADIFVVDMLGVLVLREIGVLLVAIMIAGRSGSAYTAELGSMKMR 242

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+RTMG D + +LI PR+ AL+I+LP+L+ L + +A+ G  +V W Y  +    F 
Sbjct: 243 EEIDALRTMGFDPIEVLILPRMLALVIALPILSFLGDIAALYGGGLVAWFYGGVDPEAFL 302

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
            R     ++ +   GL+KAP MA  IGIVA  EG AV   + SLG+  T+ VV+ I  VI
Sbjct: 303 LRLRDAISIDHFTVGLLKAPVMAAVIGIVACVEGLAVEGSAESLGRHTTSSVVKGIFFVI 362

Query: 359 IIDSLFAIFYFAIGI 373
           ++D +FAIF+ A+G+
Sbjct: 363 VMDGVFAIFFAAVGM 377


>gi|92116871|ref|YP_576600.1| hypothetical protein Nham_1315 [Nitrobacter hamburgensis X14]
 gi|91799765|gb|ABE62140.1| protein of unknown function DUF140 [Nitrobacter hamburgensis X14]
          Length = 377

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 139/369 (37%), Positives = 205/369 (55%), Gaps = 19/369 (5%)

Query: 12  AGNWKS---PEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
           AG W +   P +  I  D   A   +    +  +D+S I+ +DT GA LI    E+    
Sbjct: 21  AGPWTARFAPALERIVAD---AEKLAGSRPNIFIDVSQISRLDTFGAWLI----ERLRRS 73

Query: 69  IKLQGVSTHIEQLF----SLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
           +   GV   I  L     SL+    R    +  P R     +   L   +G+ +V F   
Sbjct: 74  LTQGGVEAKIAGLSLNYSSLVDEVRRVPAADPAPARQ---RALTGLIEDVGRNVVGFGTT 130

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                 +LG V++ +G        F+  L S +  +  V    VP+V+LI+F+ G +I+Q
Sbjct: 131 LTGLIGMLGAVLAASGRVMRHPRSFR--LTSTVHHLEQVCWRAVPIVVLITFLIGCIISQ 188

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG F   +FGA+IF +D++ +L LREIGVLL A+M+AGRSGSA  AE+GSMK+ EEIDA+
Sbjct: 189 QGIFHFRKFGADIFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMKMREEIDAL 248

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           RTMG D + +L+ PR+ AL+I+LP+L  L   +A+ G  +V W Y  +    F  R    
Sbjct: 249 RTMGFDPIEVLVLPRMLALVIALPILAFLGAIAALYGGGLVAWLYGGVQPEAFLIRLRDA 308

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            ++ +   G+IKAP MA  IGIVA  EG AV   + SLG++ T+ VV+ I  VI++D +F
Sbjct: 309 ISIDHFVVGMIKAPVMAAVIGIVACVEGLAVEGSAESLGQRTTSSVVKGIFFVIVMDGVF 368

Query: 365 AIFYFAIGI 373
           AIF+ +IG+
Sbjct: 369 AIFFASIGM 377


>gi|92117460|ref|YP_577189.1| hypothetical protein Nham_1921 [Nitrobacter hamburgensis X14]
 gi|91800354|gb|ABE62729.1| protein of unknown function DUF140 [Nitrobacter hamburgensis X14]
          Length = 388

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 138/371 (37%), Positives = 215/371 (57%), Gaps = 16/371 (4%)

Query: 9   FRFAGNWKSPEI---SEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
            R  G+W +  +     +AD V   + ++    S  +D+S ++E+DT+GA L+     + 
Sbjct: 28  LRPDGSWIAANVIALETLADAVAPQVERA---KSLKMDMSGLSELDTLGAWLLEKLSRRV 84

Query: 66  HG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                 +++ GVS +   L   +   +R    N  P ++   N        IG+      
Sbjct: 85  ASADHPVEVVGVSENYAGLIEEVRHVNR---HNPPPPKA--RNPVIAKVEEIGRSAWGSR 139

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
            D      +LG +              +  L SL+ Q+Y VG   +P+++LI+F+ GA+I
Sbjct: 140 EDVAVFLQMLGSLCVALLGIIRKPRSLR--LTSLVYQLYRVGWQAIPIILLITFLIGAII 197

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQG F   +FGA+ + +D++ IL LRE+GVL+ A+M+AGRSGSA  AE+GSMK+ EEID
Sbjct: 198 AQQGFFHFRKFGADSYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAELGSMKMREEID 257

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+ TMGLD V +LI PR+ AL+ +LP+LT + + +A+ G  +V W Y  +  ++F +R H
Sbjct: 258 ALSTMGLDPVVVLILPRVLALVSALPILTFIGSMAALYGGGLVAWFYGGMGPSIFIARLH 317

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
              ++ +   G+IKAPFMA  IGIVA  EG  V   + SLGK+ TT VV+SI +VI++D 
Sbjct: 318 DAVSVTHFEVGMIKAPFMALVIGIVACSEGLRVKGSAESLGKQTTTSVVKSIFLVIVLDG 377

Query: 363 LFAIFYFAIGI 373
           LFA+F+ +IG+
Sbjct: 378 LFAVFFASIGM 388


>gi|154243867|ref|YP_001409440.1| hypothetical protein Xaut_5005 [Xanthobacter autotrophicus Py2]
 gi|154162989|gb|ABS70204.1| protein of unknown function DUF140 [Xanthobacter autotrophicus Py2]
          Length = 344

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 131/332 (39%), Positives = 197/332 (59%), Gaps = 11/332 (3%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHR--KKIKNQKPQ 99
           V+LS IT +DT GA L    +E+  G  + +G    + Q+ SL     R  ++++    +
Sbjct: 20  VNLSGITRMDTFGAIL----LERLCGAWEQEG---SVPQVSSLDPRYQRLMQELERSDSR 72

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
                   + +   +G ++V    D     + +G V+S  G        F+    S + Q
Sbjct: 73  PHPQTRRSEGILERLGHEVVNTAKDGLDLLNFIGAVVSAMGRVAVRPRSFR--FTSTVAQ 130

Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219
           +  VG   VP+++LI+F+ G++IAQQ  F   +FGA+IF +D++ +L LRE+GVL+ ++M
Sbjct: 131 LDRVGFRAVPIILLITFLVGSIIAQQSIFHFRRFGADIFVVDMVGVLVLRELGVLIVSIM 190

Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279
           IAGRSGSA  AE+GSM++ EE+DA++ MGLD + +L+ PRI ALII LPLLT L + +A+
Sbjct: 191 IAGRSGSAYTAELGSMRMREEVDALKVMGLDPIEVLVVPRILALIIGLPLLTFLGSMAAL 250

Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339
           IG  +V W Y  I   VF  R      L     G+ KAPFMA AIG+VA  EG  VG  +
Sbjct: 251 IGGGLVAWFYGGITPNVFIDRLKQAIDLTQFEVGMYKAPFMAAAIGLVACLEGLKVGGSA 310

Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
            SLG+  T  VV++I +VI++D LFA+F+ +I
Sbjct: 311 ESLGQHTTASVVKAIFLVIVMDGLFAVFFASI 342


>gi|296445994|ref|ZP_06887944.1| protein of unknown function DUF140 [Methylosinus trichosporium
           OB3b]
 gi|296256512|gb|EFH03589.1| protein of unknown function DUF140 [Methylosinus trichosporium
           OB3b]
          Length = 382

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 134/366 (36%), Positives = 210/366 (57%), Gaps = 11/366 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG- 67
           F  AG+W      +I       +     +  A+VDL  ++ +DT GA +I   +++    
Sbjct: 23  FALAGDWVLAAAMDIERAAEKMVADGRGATRAVVDLVHVSRLDTAGAWVIGRALDELARA 82

Query: 68  --KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
             +  ++G     E L     F  R+   + +P+ S   +   +L    G+ +V    D+
Sbjct: 83  GVEASVEGARPEHELLLREAHF--RRFETDSRPRSSLCIDILADL----GRSVVTAGRDA 136

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            + A  LG  ++ TG   A + +F+    S +  +   G+  VP++ LI+ + GA++AQQ
Sbjct: 137 FAGAVFLGEFVAVTGRAVAIARRFR--FTSFVYHLENFGLRSVPIIALINLLVGAIVAQQ 194

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           G FQL +FGA  +++DL+ +L LRE+GVLL+++MIAGRSGSAI AE+GSMK+ EEIDA+R
Sbjct: 195 GIFQLRRFGASTYAVDLIGVLVLRELGVLLSSIMIAGRSGSAITAELGSMKMREEIDALR 254

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MGL  +  L++PRI AL++++PLL  +A+ SA+ G  +V W Y  I    +     +  
Sbjct: 255 VMGLSPMDALVTPRILALVVAMPLLAFIADMSALFGGLLVCWGYEGISPVAYLEWLQAAI 314

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
                  G+IKAPFMA  IGIV+  EG +    + SLG+ VT  VV+SI +VI++D LFA
Sbjct: 315 GRNTFMVGIIKAPFMAFTIGIVSAMEGMSTKGSAESLGRHVTAAVVKSIFMVIVLDGLFA 374

Query: 366 IFYFAI 371
           IF+ +I
Sbjct: 375 IFFASI 380


>gi|323136828|ref|ZP_08071909.1| protein of unknown function DUF140 [Methylocystis sp. ATCC 49242]
 gi|322398145|gb|EFY00666.1| protein of unknown function DUF140 [Methylocystis sp. ATCC 49242]
          Length = 380

 Score =  233 bits (594), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 142/372 (38%), Positives = 210/372 (56%), Gaps = 13/372 (3%)

Query: 4   NGITVFRFAGNW---KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI-M 59
           NG      +G+W    S  + + A  +V   ++  +     +DLS + ++DT GA LI  
Sbjct: 16  NGGERLALSGDWILIASRRLEQKAQQLV---DEGGRVKFVTIDLSGVEKLDTAGAWLINR 72

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
              E  H  + +       E    L     R+    +KP R  F N+  +L   +G  +V
Sbjct: 73  ARHELAHADVGVALAHARPEHHTMLEEAAFRE---FEKPPRRRF-NAIVDLLADLGASVV 128

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
             + +       LG  I+           F+    SL+  M  +G    P+++LI+ + G
Sbjct: 129 DALREFYRGVAFLGEFIAAMAYVATHPGHFR--FTSLVFHMETIGFRSAPIIVLINLLVG 186

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           A++AQQG FQL +FGA  +++ L+ IL LRE+GVLLT++MIAGRSGSAI AEIGSMK+ E
Sbjct: 187 AIVAQQGIFQLLKFGASSYTVSLIGILVLRELGVLLTSIMIAGRSGSAITAEIGSMKMRE 246

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDA+R MGL  + +LI+PR+ ALI+SLP+LT +A+ +A+ G  +V W Y  I  A F S
Sbjct: 247 EIDALRVMGLSPIEVLIAPRVLALIVSLPILTFIADMAALFGGLLVSWSYGGISPAAFLS 306

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                  L     G+IKAPFMA  IG++A  +G      + SLG++VT+ VV+SI +VI+
Sbjct: 307 LLKEAIALHTFLVGMIKAPFMALVIGLIAAMDGLETKGSAESLGRQVTSSVVKSIFMVIV 366

Query: 360 IDSLFAIFYFAI 371
           +D LFAIF+ +I
Sbjct: 367 LDGLFAIFFASI 378


>gi|91975833|ref|YP_568492.1| hypothetical protein RPD_1353 [Rhodopseudomonas palustris BisB5]
 gi|91682289|gb|ABE38591.1| protein of unknown function DUF140 [Rhodopseudomonas palustris
           BisB5]
          Length = 378

 Score =  232 bits (591), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 195/336 (58%), Gaps = 12/336 (3%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHI----EQLFSLISFTHRKKIKNQK 97
           +D++ + EIDTIGA    + +EK   +    G + H     E+   LI     +++   +
Sbjct: 51  IDMTEVIEIDTIGA----WLLEKASREAAQAGRTAHFVGVGERYAGLIE--EVRQVNRHR 104

Query: 98  PQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLI 157
           P      N        +G+       D      + G +              +  L SL 
Sbjct: 105 PTPKPKVNPIIARLDQVGRSAWSATQDIAVFLDMFGALGVALLGVLRRPRSLR--LTSLT 162

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
            Q+Y VG   +P+V+LI+F+ GA+IAQQG F   +FGAE + +D++ IL LREIGVL+ A
Sbjct: 163 YQIYRVGWRAIPIVVLITFLIGAIIAQQGIFHFRKFGAESYVVDMVGILVLREIGVLIVA 222

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +M+AGRSGSA  AE+GSMK+ EEIDA+ TMGLD V +LI PRI AL+I+LP+LT + + S
Sbjct: 223 IMVAGRSGSAYTAELGSMKMREEIDALSTMGLDPVEVLILPRIIALVIALPILTFIGSMS 282

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           A+ G  +  W Y  +  AV+ +R H   +L +   G+ KAPFMA  IGIVA  EG  V  
Sbjct: 283 ALYGGLLTAWFYGGMQPAVYIARLHEAVSLNSFEVGIWKAPFMALVIGIVACSEGLRVKG 342

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
            + SLG + TT VV+SI +VI++D LFA+F+ +IG+
Sbjct: 343 SAESLGLQTTTSVVKSIFLVIVLDGLFAVFFASIGL 378


>gi|39937024|ref|NP_949300.1| hypothetical protein RPA3963 [Rhodopseudomonas palustris CGA009]
 gi|192292851|ref|YP_001993456.1| hypothetical protein Rpal_4485 [Rhodopseudomonas palustris TIE-1]
 gi|39650881|emb|CAE29404.1| putative permease of ABC transporter [Rhodopseudomonas palustris
           CGA009]
 gi|192286600|gb|ACF02981.1| protein of unknown function DUF140 [Rhodopseudomonas palustris
           TIE-1]
          Length = 383

 Score =  231 bits (589), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 131/336 (38%), Positives = 192/336 (57%), Gaps = 13/336 (3%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQL----FSLISFTHRKKIKNQK 97
           +D+S I  +DT GA LI    E+    +   G    I  L     SL+    +      +
Sbjct: 57  IDVSGIARLDTFGAWLI----ERLRRNLGQDGTEARIAGLSTNYASLVDEVRQVSEAGPE 112

Query: 98  PQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLI 157
           P+R     S +     +G+ I  FI+D  +   ++G V++           F+  L S +
Sbjct: 113 PRRG---GSLRAPIERLGRTIYAFIDDIVALISMMGAVLAGVLRVVVRPTSFR--LTSTV 167

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
             +  V    VP+++LI+F+ G +IAQQG F   +FGA++F +D++ +L LREIGVLL +
Sbjct: 168 HHLEQVCWRAVPIIVLITFLIGCIIAQQGIFHFRKFGADVFVVDMLGVLVLREIGVLLVS 227

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +M+AGRSGSA  AE+GSMK+ EEIDA+RTMG D + +LI PR+ AL++++P+LT L   S
Sbjct: 228 IMVAGRSGSAYTAELGSMKMREEIDALRTMGFDPIDVLIVPRLIALVLAVPILTFLGAMS 287

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           A+ G  +V W Y  +    F  R     ++ +   G+IKAP MA  IGIVA  EG AV  
Sbjct: 288 ALYGGGLVAWMYGGVDPEAFLLRLRDAISIDHFTVGMIKAPVMAVVIGIVACVEGLAVQG 347

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
            + SLG   T  VV+SI  VI++D +FAIF+  IGI
Sbjct: 348 SAESLGSHTTASVVKSIFFVIVMDGVFAIFFAGIGI 383


>gi|154252954|ref|YP_001413778.1| hypothetical protein Plav_2512 [Parvibaculum lavamentivorans DS-1]
 gi|154156904|gb|ABS64121.1| protein of unknown function DUF140 [Parvibaculum lavamentivorans
           DS-1]
          Length = 387

 Score =  230 bits (587), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/366 (36%), Positives = 207/366 (56%), Gaps = 13/366 (3%)

Query: 12  AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKL 71
           AG+W    +  + D  + AI     +  AI+    IT  DT  A +    + +    +  
Sbjct: 31  AGDWSIVHLDPV-DRQLRAIGARPGTGRAIIGFKDITRFDTAAAAI----LGRTAAHLGE 85

Query: 72  QGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA-- 129
           QG+    E +         K      P+ +  +  ++ LH  I  KI   + D  ++   
Sbjct: 86  QGIKVDFEDVSDAQRLLLDKIDSCGMPEPA--HVPWRPLHIQIIDKIGATMRDIGAEGLA 143

Query: 130 --HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +G V++  G   A   + +      +  M   G   +P+V L++F+ GAV+AQQGA
Sbjct: 144 MLGFVGAVMATAGRTIARPSRLR--WTPFVHHMEKAGFDALPLVCLLTFLIGAVVAQQGA 201

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL QFGAE+F+++L++I+ LRE+G+LLTA+++AGRSGSA  AEIGSMK+ EEIDA+RT+
Sbjct: 202 VQLRQFGAEVFTVNLIAIIFLREVGLLLTAIIVAGRSGSAFTAEIGSMKMREEIDAMRTL 261

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GLD + +L+ PR+ AL+++LPLLT +A+   +IG  +V+    D+P  V+ SR       
Sbjct: 262 GLDPMEMLVLPRVLALMVTLPLLTFVADIMGLIGGGLVVQVMLDMPPGVYISRVQEAVGF 321

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
                GL+KAPFMA  I +V  + G +V   + S+G   T  VV+SI +VII+D+LFA+F
Sbjct: 322 WTFGVGLVKAPFMAVVIALVGCRSGLSVTGSAESVGAMTTRSVVRSIFLVIILDALFAMF 381

Query: 368 YFAIGI 373
           + A+GI
Sbjct: 382 FTAVGI 387


>gi|86748498|ref|YP_484994.1| hypothetical protein RPB_1373 [Rhodopseudomonas palustris HaA2]
 gi|86571526|gb|ABD06083.1| Protein of unknown function DUF140 [Rhodopseudomonas palustris
           HaA2]
          Length = 378

 Score =  229 bits (585), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 136/336 (40%), Positives = 195/336 (58%), Gaps = 12/336 (3%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHI----EQLFSLISFTHRKKIKNQK 97
           +D++ + EIDTIGA    + +EK        G +       ++   LI    +   +  K
Sbjct: 51  IDMTDVVEIDTIGA----WLLEKVSRDAAQAGRTAQFVGVADRYAGLIEEVRQVNRRGPK 106

Query: 98  PQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLI 157
           P+ S   N        IG+       D      +LG +              +  L SL 
Sbjct: 107 PRPSV--NPIIARLDQIGRSAWSATQDISVFLAMLGALGVALLGVLRRPRSLR--LTSLT 162

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
            Q+Y VG   +P+V+LI+F+ GA+IAQQG F   +FGAE + +D++ IL LREIGVL+ A
Sbjct: 163 YQVYRVGWQAIPIVVLITFLIGAIIAQQGIFHFRKFGAESYVVDMVGILVLREIGVLIVA 222

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +M+AGRSGSA  AE+GSMK+ EEIDA+ TMGLD V +LI PRI AL+I+LP+LT + + +
Sbjct: 223 IMVAGRSGSAYTAELGSMKMREEIDALTTMGLDPVEVLILPRIIALVIALPILTFIGSMA 282

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           A+ G  +  W Y  +  AV+ +R H   +L +   G+ KAPFMA  IGIVA  EG  V  
Sbjct: 283 ALYGGLLTAWFYGGMQPAVYIARLHEAVSLNSFEVGIWKAPFMALVIGIVACSEGLRVKG 342

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
            + SLG + TT VV+SI +VI++D LFA+F+ +IG+
Sbjct: 343 SAESLGLQTTTSVVKSIFLVIVLDGLFAVFFASIGM 378


>gi|316935525|ref|YP_004110507.1| hypothetical protein Rpdx1_4222 [Rhodopseudomonas palustris DX-1]
 gi|315603239|gb|ADU45774.1| protein of unknown function DUF140 [Rhodopseudomonas palustris
           DX-1]
          Length = 383

 Score =  229 bits (584), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 127/336 (37%), Positives = 193/336 (57%), Gaps = 13/336 (3%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQL----FSLISFTHRKKIKNQK 97
           +D+S I  +DT GA LI    E+    +   G    I  L     SL+    +       
Sbjct: 57  IDVSGIARLDTFGAWLI----ERLRRNLGQAGAEARIAGLSANYASLVDEVRQVSETGPA 112

Query: 98  PQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLI 157
           P+R     + +     +G+ +  F +D  +   ++G V++  G        F+  L S +
Sbjct: 113 PKRG---GALRAPIERLGRTMYAFFDDIVALISMMGAVLAGLGRIVIRPTSFR--LTSTV 167

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
             +  V  + VP+++LI+F+ G ++AQQG F   +FGA++F +D++ +L LRE+GVLL A
Sbjct: 168 HHLEQVCWNAVPIILLITFLIGCIVAQQGIFHFRKFGADVFVVDMLGVLVLRELGVLLVA 227

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +M+AGRSGSA  AE+GSMK+ EEIDA+RTMG D + +LI PR+ AL++++P+LT L   +
Sbjct: 228 IMVAGRSGSAYTAELGSMKMREEIDALRTMGFDPIDVLIVPRLIALVLAVPILTFLGAMA 287

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           A+ G  +V W Y  +    F  R     ++ +   G+IKAP MA  IGIVA  EG AV  
Sbjct: 288 ALYGGGLVAWLYGGVDPEAFLLRLRDAISIDHFTVGMIKAPVMAAVIGIVACVEGLAVQG 347

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
            + SLG+  T  VV+SI  VI++D +FAIF+  IGI
Sbjct: 348 SAESLGRHTTASVVKSIFFVIVMDGVFAIFFAGIGI 383


>gi|304391808|ref|ZP_07373750.1| ABC transporter, membrane spanning protein [Ahrensia sp. R2A130]
 gi|303296037|gb|EFL90395.1| ABC transporter, membrane spanning protein [Ahrensia sp. R2A130]
          Length = 385

 Score =  229 bits (583), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 135/366 (36%), Positives = 223/366 (60%), Gaps = 18/366 (4%)

Query: 12  AGNWKSPEISEIADDVVMAINKSIQSDSAIV-DLSAITEIDTIGAELIMYFMEKYHGKIK 70
           +G W    I E+ DD+      SI+  + +V + +A T++DT GA    + +E+   +++
Sbjct: 30  SGPWTIAFIEEVDDDIRAF---SIEGSAKLVLNTTAATQLDTSGA----WLIERLRQRVE 82

Query: 71  LQGVS-THIE---QLFSLISFTHRK-KIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
             G++ +H +   +   L+   HR+ + +   P ++    S++     +G+  ++F  D 
Sbjct: 83  EAGIAFSHEDDEPRRQQLVDVIHRRERPETDAPTQT---KSWRGPIVRLGEIGIEFGRDL 139

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            +  +ILG  +        S    +  ++S++ Q+  +G   VPVV ++SF+ GA+IAQQ
Sbjct: 140 MTALYILGSSVRGPSSNGGSGRGLR--VMSILNQIDQMGWRAVPVVFVMSFLIGAIIAQQ 197

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           GA+Q+  +G E+ +I L+ IL  RE+GVLLT++M+AGRSGSAI AEIG+MK+ EEIDA++
Sbjct: 198 GAYQMQAYGEELLAISLVGILHFREVGVLLTSIMVAGRSGSAITAEIGTMKMREEIDALQ 257

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MGL+ V +L+ PR+ A++I LP+LT+L+N + I+GA +V+  Y  I  + F +      
Sbjct: 258 VMGLNPVGVLLFPRLLAIMICLPILTLLSNIAGIMGAMVVMDIYVGITPSQFITTLTEDI 317

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           +  ++  GL KAP MA  IG+VA  EG  VG  S SLG++ T  VV+SI +VI++D LF 
Sbjct: 318 SPRHLAVGLAKAPVMALIIGLVAAVEGLKVGGSSESLGQRTTAAVVKSIFLVIVVDGLFT 377

Query: 366 IFYFAI 371
           IF+ A+
Sbjct: 378 IFFSAM 383


>gi|209884491|ref|YP_002288348.1| ABC transporter permease protein [Oligotropha carboxidovorans OM5]
 gi|209872687|gb|ACI92483.1| ABC transporter permease protein [Oligotropha carboxidovorans OM5]
          Length = 378

 Score =  228 bits (582), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 139/375 (37%), Positives = 213/375 (56%), Gaps = 24/375 (6%)

Query: 9   FRFAGNW---KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME-K 64
            R AG W    +P + ++ +    A  KS ++ + ++D+S ++ +DT GA LI      +
Sbjct: 18  LRAAGEWTVHHAPALEKLVEHTERA-GKS-RNAALVIDVSQVSRLDTFGAWLIERLRRAQ 75

Query: 65  YHGKI--KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF----FYNSFKNLHYHIGKKI 118
             G +   + G+S       SL+    R K    +P+ +F       +       +G+ +
Sbjct: 76  IRGDVAPPIAGLSA---DYASLVEEVKRVKAPPVQPRPAFGPIRAVEAVGRSVVEVGQTL 132

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +  +N   S  H L  VI +      S ++F     S I  +  V    VP+V+LI+F+ 
Sbjct: 133 LSLLNMMGSVLHALWRVILHP-----SHFRFT----STIHHLEQVCWRAVPIVLLITFLI 183

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G +IAQQG FQ  +FGA++F +D++ +L LREIGVLL A+M+AGRSGSA  AE+GSM++ 
Sbjct: 184 GCIIAQQGIFQFRKFGADVFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMRMR 243

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE+DA+RTMG D   +LI PRI ALII++P+L  L   +A+ G  +  W Y  +    F 
Sbjct: 244 EEVDALRTMGFDPTEVLILPRILALIIAMPILAFLGAMAALYGGGLTAWLYGGVQPDAFL 303

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +R     ++ +   GL+KAPFMA  IGI+A  EG AV   + SLG+  T  VV+SI  VI
Sbjct: 304 ARLREAISINHFTVGLVKAPFMALIIGIIACVEGAAVRGSAESLGQHTTASVVKSIFFVI 363

Query: 359 IIDSLFAIFYFAIGI 373
           ++D +FAIF+ +IG+
Sbjct: 364 VVDGIFAIFFASIGV 378


>gi|39937298|ref|NP_949574.1| hypothetical protein RPA4238 [Rhodopseudomonas palustris CGA009]
 gi|39651156|emb|CAE29679.1| putative permease of ABC transporter [Rhodopseudomonas palustris
           CGA009]
          Length = 378

 Score =  228 bits (581), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 143/372 (38%), Positives = 210/372 (56%), Gaps = 26/372 (6%)

Query: 13  GNWKSPE---ISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH--- 66
           G W +     + +++ DV   I  +    S  +D++ I EIDTIGA    + +EK     
Sbjct: 22  GAWTATNSKFMEQLSQDVAPQIAAA---KSLTIDMAEIGEIDTIGA----WVLEKLSRSA 74

Query: 67  ---GKI-KLQGVSTHIEQLFSLI-SFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
              G+  + +G+ST   +L   +     R    + KP      N        IG+     
Sbjct: 75  AQAGRTAQFKGISTSYAELIDEVRQLNRRGPTPHPKP------NPIIAKLDEIGRSAWSA 128

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             D      +LG + +            +  L SL  Q+Y VG   +P+++LI+F+ GA+
Sbjct: 129 TTDMAVFLEMLGALGAALLGVLRRPRSLR--LTSLTYQVYRVGWQAIPIMVLITFLIGAI 186

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IAQQG F   +FGAE + +D++ IL LREIGVL+ A+M+AGRSGSA  AE+GSMK+ EEI
Sbjct: 187 IAQQGIFHFRKFGAESYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMREEI 246

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+ TMGLD V +LI PRI AL+I+LP+L  + + +A+ G  +  W Y  +  +VF +R 
Sbjct: 247 DALSTMGLDPVEVLILPRIIALVIALPILAFVGSMAALYGGLLTAWFYGGMQPSVFIARL 306

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           H   +L +   G+ KAPFMA  IGIVA  EG  V   + SLG + TT VV+SI +VI++D
Sbjct: 307 HEAVSLNSFEVGMWKAPFMALVIGIVACSEGLRVKGSAESLGLQTTTSVVKSIFLVIVLD 366

Query: 362 SLFAIFYFAIGI 373
            LFA+F+ +IG+
Sbjct: 367 GLFAVFFASIGM 378


>gi|192293078|ref|YP_001993683.1| hypothetical protein Rpal_4717 [Rhodopseudomonas palustris TIE-1]
 gi|192286827|gb|ACF03208.1| protein of unknown function DUF140 [Rhodopseudomonas palustris
           TIE-1]
          Length = 382

 Score =  228 bits (581), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 143/372 (38%), Positives = 210/372 (56%), Gaps = 26/372 (6%)

Query: 13  GNWKSPE---ISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH--- 66
           G W +     + +++ DV   I  +    S  +D++ I EIDTIGA    + +EK     
Sbjct: 26  GAWTATNSKFMEQLSQDVAPQIAAA---KSLTIDMAEIGEIDTIGA----WVLEKLSRSA 78

Query: 67  ---GKI-KLQGVSTHIEQLFSLI-SFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
              G+  + +G+ST   +L   +     R    + KP      N        IG+     
Sbjct: 79  AQAGRTAQFKGISTSYAELIDEVRQLNRRGPTPHPKP------NPIIAKLDEIGRSAWSA 132

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             D      +LG + +            +  L SL  Q+Y VG   +P+++LI+F+ GA+
Sbjct: 133 TTDMAVFLEMLGALGAALLGVLRRPRSLR--LTSLTYQVYRVGWQAIPIMVLITFLIGAI 190

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IAQQG F   +FGAE + +D++ IL LREIGVL+ A+M+AGRSGSA  AE+GSMK+ EEI
Sbjct: 191 IAQQGIFHFRKFGAESYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMREEI 250

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+ TMGLD V +LI PRI AL+I+LP+L  + + +A+ G  +  W Y  +  +VF +R 
Sbjct: 251 DALSTMGLDPVEVLILPRIIALVIALPILAFVGSMAALYGGLLTAWFYGGMQPSVFIARL 310

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           H   +L +   G+ KAPFMA  IGIVA  EG  V   + SLG + TT VV+SI +VI++D
Sbjct: 311 HEAVSLNSFEVGMWKAPFMALVIGIVACSEGLRVKGSAESLGLQTTTSVVKSIFLVIVLD 370

Query: 362 SLFAIFYFAIGI 373
            LFA+F+ +IG+
Sbjct: 371 GLFAVFFASIGM 382


>gi|182680400|ref|YP_001834546.1| hypothetical protein Bind_3500 [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182636283|gb|ACB97057.1| protein of unknown function DUF140 [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 376

 Score =  228 bits (580), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 125/362 (34%), Positives = 211/362 (58%), Gaps = 8/362 (2%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72
           G+W     + + + ++  + +  +  +  VD+  + EIDT GA L+   ++ +  + K  
Sbjct: 22  GSWIGAHAAAL-EPLIEGVRRDGRGRTLSVDMRGVDEIDTFGACLLERLIQSWKAEGKET 80

Query: 73  GVSTHIEQLFSLIS-FTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHI 131
            ++   ++   L++   H  +  +Q   +    +S +      G+  +    D+ +   +
Sbjct: 81  TITGLSDRFGDLVAEVDHVSRSMSQAAAKRTSLDSLRAF----GRAAMDLWLDTRNFLVV 136

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG +++          K +    SL+ Q+  VG+  VP+++LI+F+ G +IAQQG F   
Sbjct: 137 LGRLVAVFLVVLRHPKKMR--FTSLVAQLDRVGLQAVPIILLITFLIGGIIAQQGLFNFR 194

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           +FGA+ + +DL++ L LRE+GVL+ A+M+AGRSGS+  AEIGSMK+ EEIDA+RTMGLD 
Sbjct: 195 KFGADTYVVDLLAFLVLRELGVLIVAIMVAGRSGSSYTAEIGSMKMREEIDALRTMGLDP 254

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V +L+ PR+ AL+++LP+LT L   +A+ G  +V W Y  +   +F  R    A+L    
Sbjct: 255 VEVLLLPRVLALVLALPMLTFLGFMAALYGGGVVSWIYGGMSPPIFIERIRDAASLTQFE 314

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
            GLIKAPFMA  IG++A  EG AV   + SLG + T+ VV+SI ++I++D +  +F+ A 
Sbjct: 315 VGLIKAPFMALVIGVIACTEGLAVQGSAESLGLRTTSSVVKSIFLIIVLDGILDLFFAAT 374

Query: 372 GI 373
           G+
Sbjct: 375 GM 376


>gi|148256837|ref|YP_001241422.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146409010|gb|ABQ37516.1| putative ABC transporter (permease protein) [Bradyrhizobium sp.
           BTAi1]
          Length = 377

 Score =  227 bits (579), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 134/368 (36%), Positives = 202/368 (54%), Gaps = 11/368 (2%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH-- 66
            R  G W +P    +   V  A   + +     +D+S ++ +DT GA LI      +   
Sbjct: 18  LRATGAWTAPFAPSLERLVADAEKLAGKKIDVSIDVSEVSRLDTFGAWLIERLRRSFTTG 77

Query: 67  -GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
             + ++ G+S +     SL+    R    +  P       +   +   IG+ +       
Sbjct: 78  TAEARIDGLSANYA---SLVDEVRRV---SAAPDGDATAVTITGMLGQIGRSVAGIFGTV 131

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            +   +LG VI  +G        F+  L S I  +  V    VP+++LI+F+ G +IAQQ
Sbjct: 132 AALIDMLGAVIVASGRVFIHPRSFR--LTSTIHHLEQVCWRAVPIIVLITFLIGCIIAQQ 189

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           G F   +FGA+IF +D++ +L LREIGVLL A+MIAGRSGSA  AE+GSMK+ EEIDA+R
Sbjct: 190 GIFHFRRFGADIFVVDMLGVLVLREIGVLLVAIMIAGRSGSAYTAELGSMKMREEIDALR 249

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           TMG D + +LI PR+ AL+I+LP+L+ L + +A+ G  +V W Y  +    F  R     
Sbjct: 250 TMGFDPIEVLILPRMLALVIALPILSFLGDIAALYGGGLVAWFYGGVDPEAFLLRLREAI 309

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           ++ +   GL+KAP MA  IGIVA  EG AV   + SLG+  T+ VV+ I  VI++D +FA
Sbjct: 310 SIDHFTVGLLKAPVMAAVIGIVACVEGLAVQGSAESLGRHTTSSVVKGIFFVIVMDGVFA 369

Query: 366 IFYFAIGI 373
           IF+  +G+
Sbjct: 370 IFFATVGM 377


>gi|27381176|ref|NP_772705.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354343|dbj|BAC51330.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 378

 Score =  227 bits (578), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 135/373 (36%), Positives = 216/373 (57%), Gaps = 20/373 (5%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSD-----SAIVDLSAITEIDTIGAELIMYFME 63
            R  G+W +  ++     ++  +++S+ +D     +  +D+S ++ +DT+GA    + +E
Sbjct: 18  LRPQGSWTAANVA-----MLETLSRSVGADVDRSRAVTLDMSGVSALDTLGA----WVLE 68

Query: 64  KYHGKIKLQGVSTH---IEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
           K   +    G S     +   FS +    R+  ++     +        L   +GK  V 
Sbjct: 69  KLSRRAATSGRSAEFVGVADHFSGLMDEVREVNRHTPAPAAAPNPLLLRLG-DLGKSTVG 127

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
              D      +LG +              +  L SL+ Q+Y +G   +P+V LI+F+ GA
Sbjct: 128 AREDITIFLQMLGALFMAIFGVLRRPRSLR--LTSLVYQLYRIGWQAIPIVALITFLIGA 185

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           +IAQQG F   +FGAE +++D++ IL LRE+GVL+ A+M+AGRSGSA  AE+GSMK+ EE
Sbjct: 186 IIAQQGFFHFRRFGAESYTVDMVGILVLRELGVLIVAIMVAGRSGSAYTAELGSMKMREE 245

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+ TMGLD V +LI PR+ AL+I+LP+L  + + +A+ G  +V   Y D+  A++ +R
Sbjct: 246 IDALSTMGLDPVGVLILPRVAALVIALPILAFIGSIAALYGGGLVAQFYGDMGPAIYIAR 305

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
            H   ++ +   G++KAPFMA  IGIVA  EG  V   + SLG++ TT VV+SI +VI++
Sbjct: 306 LHEAISVTHFEVGILKAPFMALVIGIVACSEGLRVKGSAESLGRQTTTSVVKSIFLVIVL 365

Query: 361 DSLFAIFYFAIGI 373
           D LFAIF+ +IG+
Sbjct: 366 DGLFAIFFASIGM 378


>gi|316935758|ref|YP_004110740.1| hypothetical protein Rpdx1_4456 [Rhodopseudomonas palustris DX-1]
 gi|315603472|gb|ADU46007.1| protein of unknown function DUF140 [Rhodopseudomonas palustris
           DX-1]
          Length = 382

 Score =  227 bits (578), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 141/370 (38%), Positives = 207/370 (55%), Gaps = 22/370 (5%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQS-DSAIVDLSAITEIDTIGAELIMYFMEKYH----- 66
           G W +   S+I + +     + I S  S  +D++AI EIDTIGA    + +EK       
Sbjct: 26  GAWTATN-SKIMEQLSAGAAQQIASAKSLTIDMAAIGEIDTIGA----WVLEKLSRSAAE 80

Query: 67  --GKIKLQGVSTHIEQLFSLI-SFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
                + +G++    +L   +     R    + KP      N        IG+       
Sbjct: 81  AGSPAQFKGIADSYAELIDEVRQLNRRGPTPHPKP------NPIIAKLDEIGRSAWSATA 134

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
           D      +LG +              +  L SL  Q+Y VG   +P+++LI+F+ GA+IA
Sbjct: 135 DIAVFLQMLGALGVAVLGVLRRPRSLR--LTSLTYQVYRVGWQAIPIMVLITFLIGAIIA 192

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           QQG F   +FGA+ + +D++ IL LREIGVL+ A+M+AGRSGSA  AE+GSMK+ EEIDA
Sbjct: 193 QQGIFHFRKFGADSYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMREEIDA 252

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           + TMGLD V +LI PRI AL+I+LP+L  + + +A+ G  +  W Y  +  +VF +R H 
Sbjct: 253 LSTMGLDPVEVLILPRIIALVIALPILAFIGSMAALYGGLLTAWFYGGMQPSVFIARLHE 312

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             +L +   G+ KAPFMA  IGIVA  EG  V   + SLG + TT VV+SI +VI++D L
Sbjct: 313 AVSLNSFQVGMWKAPFMALVIGIVACSEGLRVKGSAESLGLQTTTSVVKSIFLVIVLDGL 372

Query: 364 FAIFYFAIGI 373
           FA+F+ +IG+
Sbjct: 373 FAVFFASIGM 382


>gi|254470335|ref|ZP_05083739.1| ABC transporter permease protein [Pseudovibrio sp. JE062]
 gi|211960646|gb|EEA95842.1| ABC transporter permease protein [Pseudovibrio sp. JE062]
          Length = 382

 Score =  227 bits (578), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 138/373 (36%), Positives = 214/373 (57%), Gaps = 8/373 (2%)

Query: 2   SENG-ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           +E+G + +   +G W   +     ++++  +  S+      VDL A++ +DT GA L+  
Sbjct: 15  AEDGALLLLTASGAWGIRQ-GATCENLINQVAASLTHSVICVDLKAVSFLDTAGAWLLQR 73

Query: 61  F-MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
           F ME+     +++ +    E+   L+    R+++ N  P      NSF N    +G+   
Sbjct: 74  FQMEQAEQGREVKFLYED-ERFDILLKEVDRQEVDN--PTEEHSGNSFLNYLEAVGEATR 130

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           +   D+     +LG + +          + +   + +  Q   +G   VP+V L+SF+ G
Sbjct: 131 QLGRDTRDILAMLGSLTATITAAATHPSRLRPISIGVQFQRSCMG--AVPIVCLMSFLIG 188

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            +IAQQG F L QFGAEIF +DL  IL LREIGV+LTA+M+AGRSGSA  AE+GSMK+ E
Sbjct: 189 GIIAQQGGFYLKQFGAEIFVVDLSGILVLREIGVILTAIMVAGRSGSAYTAELGSMKMQE 248

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDA++  GL    +LI PR+ AL+I+LP+L  LAN +A+ GA +  W Y  I    F +
Sbjct: 249 EIDALQVTGLRVTEVLILPRLVALMIALPILVFLANIAALFGAGLTCWWYLGIVPHSFIA 308

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           +  +  T+  +  G++KAPFMA  IG++A  EG  V   S SLG+  T  VV+SI +VI+
Sbjct: 309 QLQAAVTVDTLMVGIVKAPFMALIIGLIACMEGMKVEGSSESLGRHTTVSVVKSIFMVIV 368

Query: 360 IDSLFAIFYFAIG 372
           +D +FA+F+ +IG
Sbjct: 369 VDGVFAVFFASIG 381


>gi|299131823|ref|ZP_07025018.1| protein of unknown function DUF140 [Afipia sp. 1NLS2]
 gi|298591960|gb|EFI52160.1| protein of unknown function DUF140 [Afipia sp. 1NLS2]
          Length = 383

 Score =  226 bits (577), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 133/371 (35%), Positives = 206/371 (55%), Gaps = 16/371 (4%)

Query: 9   FRFAGNWK---SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---M 62
            R  G W    +P + ++ +    + + S    S ++D+S I+ +DT GA LI      +
Sbjct: 23  LRAGGEWTVHHAPALEKLVERTERSRDGS--RASLVIDVSQISRLDTFGAWLIERLRRAL 80

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            +      + G+S     L   +     K++K         +   + +   +G+ +V   
Sbjct: 81  TRGDTAPMIAGLSADYASLVEEV-----KRVKAVPEPAKVPFGPVRAVEA-VGRTVVGVA 134

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +      ++ G ++S           F+  L S + Q+  V    VP+V+LI+F+ G +I
Sbjct: 135 DTLLGLLNMTGSILSAFWRVILHPSHFR--LTSTVHQLEQVCWRAVPIVVLITFLIGCII 192

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQG FQ  +FGA++F +D++ +L LREIGVLL A+M+AGRSGSA  AE+GSM++ EE+D
Sbjct: 193 AQQGIFQFRKFGADVFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMRMREEVD 252

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+RTMG D   +LI PRI AL+I++P+L  L   +A+ G  +  W Y  +    F SR  
Sbjct: 253 ALRTMGFDPTEVLILPRILALVIAMPILAFLGAMAALYGGGLTAWLYGGVQPDAFLSRLR 312

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
              ++ +   GL+KAPFMA  IGI+A  EG AV   + SLGK  T  VV+SI  VI++D 
Sbjct: 313 EAISINHFTVGLVKAPFMALIIGIIACVEGAAVQGSAESLGKHTTASVVKSIFFVIVVDG 372

Query: 363 LFAIFYFAIGI 373
           LFAIF+ +IG+
Sbjct: 373 LFAIFFASIGV 383


>gi|90422963|ref|YP_531333.1| hypothetical protein RPC_1452 [Rhodopseudomonas palustris BisB18]
 gi|90104977|gb|ABD87014.1| protein of unknown function DUF140 [Rhodopseudomonas palustris
           BisB18]
          Length = 377

 Score =  226 bits (576), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 129/365 (35%), Positives = 207/365 (56%), Gaps = 11/365 (3%)

Query: 12  AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEKYHGK 68
           AG+W +P    +   V  A   S    +  +D+SA+ ++DT GA LI      + +   +
Sbjct: 21  AGSWTAPFAPVLERIVAEAEALSGTRPNISIDVSAVAKLDTFGAWLIERLRRSLTQGDAE 80

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
             + G+S +   L   +     +++K+ +P +     S +     +G+ +  F++     
Sbjct: 81  ATIAGLSANYSSLVDEV-----RRVKDPEPSKRGGI-SLRAPVERLGRSVAGFLDTIVGL 134

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             + G V++           F+  L S +  +  V    VP+V+LI+F+ G ++AQQG F
Sbjct: 135 VAMTGAVMAGMLRVVMHPGSFR--LTSTVHHLEQVCWRAVPIVMLITFLIGCIVAQQGIF 192

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
              +FGA++F +D++ +L LRE+GVLL A+M+AGRSGSA  AE+GSMK+ EEIDA+RTMG
Sbjct: 193 HFRKFGADVFVVDMLGVLVLRELGVLLVAIMVAGRSGSAYTAELGSMKMREEIDALRTMG 252

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
            D + +LI PR+ AL++++P+LT L   +A+ G  +V W Y  +    F  R     ++ 
Sbjct: 253 FDPIDVLIMPRMMALVLAMPILTFLGVVAALYGGGLVAWLYGGVDPDAFLLRLRDAISID 312

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   G+IKAP MA  IGIVA  EG AV   + SLG+  T  VV+ I  VI++D +FAIF+
Sbjct: 313 HFTVGMIKAPVMAIVIGIVACVEGLAVAGSAESLGRHTTASVVKGIFFVIVMDGVFAIFF 372

Query: 369 FAIGI 373
            +IG+
Sbjct: 373 ASIGM 377


>gi|90425518|ref|YP_533888.1| hypothetical protein RPC_4043 [Rhodopseudomonas palustris BisB18]
 gi|90107532|gb|ABD89569.1| protein of unknown function DUF140 [Rhodopseudomonas palustris
           BisB18]
          Length = 378

 Score =  225 bits (573), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 133/370 (35%), Positives = 208/370 (56%), Gaps = 12/370 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           + R  G+W +   + +     +   +  Q+ +  +DL+ + EIDT+GA    + +EK   
Sbjct: 17  LLRPTGSWTAVHAAALEHLFDVVAPQLRQAKALTIDLAELHEIDTLGA----WLLEKISR 72

Query: 68  KIKLQGVSTHI----EQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           +    G    +    E+   LI     +++  ++P  +   +        IG+       
Sbjct: 73  RAAQAGHPASVVGAAERYAGLID--QVRQVNRRQPANAVRGSLILTRLEDIGRATWGARE 130

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
           D  +   + G + +            +  L SL+ Q+Y VG   +P++ LI+F+ GA+IA
Sbjct: 131 DLFAFLQMTGALANALLGVLRRPRSLR--LTSLVYQIYRVGWQAIPIIGLITFLIGAIIA 188

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           QQG F   +FGAE + +D++ IL LRE+GVL+ A+M+AGRSGSA  AE+GSMK+ EEIDA
Sbjct: 189 QQGIFHFRKFGAESYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAELGSMKMREEIDA 248

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           + TM LD V +LI PR+ ALII+LP+L  L   +A+ G  +V W Y  +   +F +R H 
Sbjct: 249 LSTMDLDPVEVLILPRVIALIIALPILAFLGAMAALYGGGLVAWFYGGMSPTIFIARLHE 308

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             ++ +   G+IKAPFMA  IGIVA  EG  V   + SLG++ T  VV+SI  VI++D L
Sbjct: 309 AVSITHFEVGIIKAPFMALVIGIVACSEGLRVMGSAESLGRQTTASVVKSIFCVIVLDGL 368

Query: 364 FAIFYFAIGI 373
           FA+F+ +IG+
Sbjct: 369 FAVFFASIGM 378


>gi|254512708|ref|ZP_05124774.1| ABC transporter, inner membrane subunit [Rhodobacteraceae bacterium
           KLH11]
 gi|221532707|gb|EEE35702.1| ABC transporter, inner membrane subunit [Rhodobacteraceae bacterium
           KLH11]
          Length = 374

 Score =  225 bits (573), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/368 (36%), Positives = 207/368 (56%), Gaps = 15/368 (4%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIV-DLSAITEIDTIGAELIMYFMEKY--- 65
           R  G+ ++ E+    DDV     K   S   +V D+S +  +DT GA LI   + +    
Sbjct: 18  RITGDLRTQEL----DDVEADFGKLRPSGQNVVLDMSQLQSLDTGGAWLIADLVRRLGSD 73

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
             +++ +G       L   +S    + + +Q P R             IG++      D+
Sbjct: 74  SSQVQFEGAKPAHASLIETVSKNIPQAVGDQAPARGVVV-----WVSRIGERTFGAWEDT 128

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            S    LGL +          ++ +    +L+ QM  VG   +P+V L+ F+ G V+A Q
Sbjct: 129 LSIMGFLGLTLHRLVRTLIMPWRLR--RAALVSQMEQVGFKALPIVALMGFLIGVVLAFQ 186

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           GA QL QFGAEIF ++L+SI  LRE+G+LLTA+++AGRSGSA  A IGSMK+ EEIDA+R
Sbjct: 187 GATQLKQFGAEIFVVELISISILRELGILLTAIIVAGRSGSAFTASIGSMKVQEEIDAMR 246

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           T+GLD + +L+ PR+ AL+I LP+L  +A+ + +IG +++ W    +   +F +R     
Sbjct: 247 TLGLDPIEVLVIPRVLALLIMLPILGFIADMAGLIGGALMSWIDLGVSPGMFLTRLKENT 306

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            +A +  G+IKAPF A  IG++A  +   V   S S+G++ T  VVQSI +VI ID+LF+
Sbjct: 307 GVAQLAVGMIKAPFFALVIGVIACWQAMQVKGSSESVGQRTTASVVQSIFMVIAIDALFS 366

Query: 366 IFYFAIGI 373
           IF+  +G+
Sbjct: 367 IFFSELGV 374


>gi|115523490|ref|YP_780401.1| hypothetical protein RPE_1471 [Rhodopseudomonas palustris BisA53]
 gi|115517437|gb|ABJ05421.1| protein of unknown function DUF140 [Rhodopseudomonas palustris
           BisA53]
          Length = 377

 Score =  224 bits (572), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/367 (36%), Positives = 207/367 (56%), Gaps = 15/367 (4%)

Query: 12  AGNWKSPEISEIADDVVMAINKSIQSDSA--IVDLSAITEIDTIGAELIMYFMEKY-HGK 68
           AG W +P    +   VV A  +++ SD A  ++D+S ++ +DT GA LI         G 
Sbjct: 21  AGPWTAPYAPALERIVVEA--EALSSDGAKVLIDVSDVSRLDTFGAWLIERLRRSLAQGG 78

Query: 69  IKLQ--GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
           I+ Q  G+S +   L   +     ++++     RS        L   IG+ +V F +   
Sbjct: 79  IEAQIAGLSANYSSLVDEV-----RRVEADDAPRSTKMRLRAPLE-EIGRNVVGFGDTMV 132

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           S   + G V ++          F+  L S +  +  V    VP+V+LI+F+ G ++AQQG
Sbjct: 133 SLVAMSGAVTASVFRLIRHPLSFR--LTSTVHHLEQVCWRAVPIVVLITFLIGCIVAQQG 190

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
            F   +FGA++F +D++ +L LRE+GVLL A+M+AGRSGSA  AE+GSMK+ EEIDA+RT
Sbjct: 191 IFHFRKFGADVFVVDMLGVLVLRELGVLLVAIMVAGRSGSAYTAELGSMKMREEIDALRT 250

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG D + +L+ PR+ AL++++P+LT L   +A+ G  +V W Y  +    F  R     +
Sbjct: 251 MGFDPIDVLVMPRLIALVLAVPILTFLGVVAALYGGGLVAWVYGGVEPDAFLLRLREAIS 310

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           + +   G+IKAP MA  IG+VA  EG AV   + SLG+  T  VV+ I  VI++D +FAI
Sbjct: 311 IDHFTVGMIKAPVMALVIGVVACVEGLAVQGSAESLGQHTTASVVKGIFFVIVMDGVFAI 370

Query: 367 FYFAIGI 373
            +  IG+
Sbjct: 371 MFATIGM 377


>gi|91976115|ref|YP_568774.1| hypothetical protein RPD_1636 [Rhodopseudomonas palustris BisB5]
 gi|91682571|gb|ABE38873.1| protein of unknown function DUF140 [Rhodopseudomonas palustris
           BisB5]
          Length = 383

 Score =  223 bits (568), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 135/367 (36%), Positives = 204/367 (55%), Gaps = 15/367 (4%)

Query: 12  AGNWKS---PEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
           AG+W +   P +  I  D   A   +    +  +D+S +  +DT GA LI    E+    
Sbjct: 27  AGSWTARFAPSLERIVAD---AEKLTGTRPNIFIDVSEVARLDTFGAWLI----ERLRRN 79

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN--SFKNLHYHIGKKIVKFINDSC 126
           +   GV   I  L S    +   +++  +P      +  + +     +G+ +  F +D  
Sbjct: 80  LTQDGVEARIAGL-SANYASLVDEVRQVQPDVPAVASGGALRAPIEKLGRTMYVFADDIV 138

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +   +LG V++           F+  L S +  +  V    VP+V+LI+F+ G +IAQQG
Sbjct: 139 ALISMLGAVLAGVMRAILHPTTFR--LTSTVHHLEQVCWRAVPIVVLITFLIGCIIAQQG 196

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
            F   +FGA++F +D++ +L LREIGVLL A+M+AGRSGSA  AE+GSMK+ EEIDA+RT
Sbjct: 197 IFHFRRFGADVFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMKMREEIDALRT 256

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG D + +LI PR+ AL++++P+LT L   SA+ G  +V W Y  +    F  R     +
Sbjct: 257 MGFDPIDVLIVPRLIALLLAMPILTFLGAMSALYGGGLVAWLYGGVDPEAFLLRLRDAIS 316

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           + +   G+IKAP MA  IGIVA  EG AV   + SLG   T  VV+ I  VI++D +FAI
Sbjct: 317 INHFTVGMIKAPVMALVIGIVACVEGLAVKGSAESLGSHTTASVVKGIFFVIVMDGVFAI 376

Query: 367 FYFAIGI 373
           F+ +IGI
Sbjct: 377 FFASIGI 383


>gi|86748751|ref|YP_485247.1| hypothetical protein RPB_1627 [Rhodopseudomonas palustris HaA2]
 gi|86571779|gb|ABD06336.1| Protein of unknown function DUF140 [Rhodopseudomonas palustris
           HaA2]
          Length = 383

 Score =  223 bits (567), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 133/366 (36%), Positives = 201/366 (54%), Gaps = 13/366 (3%)

Query: 12  AGNWKS---PEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
           AG+W +   P +  I  D   A   +    +  +D+S +  +DT GA LI    E+    
Sbjct: 27  AGSWTAKFAPVLERIVAD---AEQLTGTRPNIFIDVSEVVRLDTFGAWLI----ERLRRN 79

Query: 69  IKLQGVSTHIEQLFS-LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
           +   G+   I  L +   S     +     P  +      +     +G+ +  F +D  +
Sbjct: 80  LAQDGIEAKIAGLSANYASLVDEVRQVEPVPADTSRGGGLRAPIEKLGRTMFAFGDDIVA 139

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              +LG V++           F+  L S +  +  V    VP+V+LI+F+ G +IAQQG 
Sbjct: 140 LISMLGAVLAGVLRAILHPSTFR--LASTVHHLEQVCWRAVPIVVLITFLIGCIIAQQGI 197

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
           F   +FGA++F +D++ +L LREIGVLL A+M+AGRSGSA  AE+GSMK+ EEIDA+RTM
Sbjct: 198 FHFRRFGADVFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMKMREEIDALRTM 257

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G D + +LI PR+ AL++++P+LT L   +A+ G  +V W Y  +    F  R     ++
Sbjct: 258 GFDPIDVLIVPRLLALLLAMPILTFLGAMAALYGGGLVAWLYGGVDPEAFLLRLRDAISI 317

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   G+IKAP MA  IGIVA  EG AV   + SLG+  T  VV+ I  VI++D +FAIF
Sbjct: 318 NHFTVGMIKAPVMALVIGIVACVEGLAVRGSAESLGQHTTASVVKGIFFVIVMDGVFAIF 377

Query: 368 YFAIGI 373
           + +IGI
Sbjct: 378 FASIGI 383


>gi|298292077|ref|YP_003694016.1| hypothetical protein Snov_2101 [Starkeya novella DSM 506]
 gi|296928588|gb|ADH89397.1| protein of unknown function DUF140 [Starkeya novella DSM 506]
          Length = 382

 Score =  222 bits (566), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 129/369 (34%), Positives = 201/369 (54%), Gaps = 12/369 (3%)

Query: 8   VFRFAGNWKSPEISEIAD--DVVMAINKSIQSDSAIVDLSAITEIDTIGA---ELIMYFM 62
           VF   G W + +   +    D  +A  K    ++A +DLS +   DT+GA   + ++  +
Sbjct: 19  VFVGNGRWVAGQGRALEGGVDTALAELKVGAVETARLDLSGVRGFDTVGAVMVDRLLRAL 78

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           E    + ++ G+      L   I      K  +  P R    N+       +G+ +V   
Sbjct: 79  EVAGVRFQIVGLERRFRPLLDEIV-----KGSHDVPPRRHHVNAVIGGIQLVGQTVVNTG 133

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
            DS      +G V++           F+G   S++  +   G+  VP++ LI+F+ G +I
Sbjct: 134 RDSLVFLSFIGAVVAALLRVIVRPQTFRG--TSMVYHLERTGLRAVPIIALITFLIGCII 191

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQG F   +FGA  + +D++ IL LRE+GVL+ ++M+AGRSGSA  AE+GSM++ EE+D
Sbjct: 192 AQQGIFHFRKFGATTYVVDMVGILTLRELGVLIVSIMVAGRSGSAFTAELGSMRMREEVD 251

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R MG D   +L+ PR+ ALII++PLLT + N  A+ G  +V W Y  I   +F +R  
Sbjct: 252 ALRVMGFDPNEVLVLPRLVALIIAVPLLTFIGNMCALFGGGLVAWLYGGISPEIFLNRLQ 311

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L     G+IKAPFMA  +G++A  EG  VG  + SLG   T  VV++I +VI++D 
Sbjct: 312 EAIALNTFEVGMIKAPFMAAIVGLIACMEGMRVGGSAESLGAHTTAAVVKAIFLVIVVDG 371

Query: 363 LFAIFYFAI 371
           LFA+F+ AI
Sbjct: 372 LFAMFFAAI 380


>gi|154248034|ref|YP_001418992.1| hypothetical protein Xaut_4113 [Xanthobacter autotrophicus Py2]
 gi|154162119|gb|ABS69335.1| protein of unknown function DUF140 [Xanthobacter autotrophicus Py2]
          Length = 474

 Score =  221 bits (562), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/367 (37%), Positives = 207/367 (56%), Gaps = 23/367 (6%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQS----DSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
           G W     SE AD++  A++ + +S        +DLSA+  +DT GA L       + G 
Sbjct: 121 GAW----TSEYADELEQAVDDTARSYANPKGIEIDLSAVERMDTFGALLFERLKRSWKGT 176

Query: 69  IKLQGVSTHIEQLFS----LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
               GV   ++ L      LI    R   +   P R       + +    G + V    D
Sbjct: 177 ----GVEPQVKGLAPRYKVLIEEMGRMGQEQPPPARRH-----EAILERFGHETVNVAAD 227

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           + +  + +G  ++  G        F+    +++ QM  VG+  VP+++LI+F+ G ++AQ
Sbjct: 228 AAALLNFVGASVAAMGRVLLRPRSFR--FTAMVNQMDRVGLRAVPIIVLITFLIGCILAQ 285

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG F   +FGA+I+ +D++ +L LRE+GVL+ A+MIAGRSGSA  AE+GSM++ EEIDA+
Sbjct: 286 QGIFNFRRFGADIYVVDMVGVLVLRELGVLIVAIMIAGRSGSAYTAELGSMRMREEIDAL 345

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R MG D V +L+ PR+ ALII+LPLLT + + S+++GA +V W Y  I   VF  R    
Sbjct: 346 RVMGFDPVEVLVVPRLLALIIALPLLTFIGSMSSLLGAGLVSWGYGGITPDVFLDRLKGA 405

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             +     G+IKAPFMA  IGIVA  EG  VG  + SLG   T  VV++I +VI++D +F
Sbjct: 406 IDMDQFNVGMIKAPFMAATIGIVACLEGLRVGGSAESLGAHTTASVVKAIFLVIVMDGVF 465

Query: 365 AIFYFAI 371
           A+F+ AI
Sbjct: 466 AMFFAAI 472


>gi|27381005|ref|NP_772534.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354171|dbj|BAC51159.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 367

 Score =  220 bits (560), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 132/365 (36%), Positives = 201/365 (55%), Gaps = 13/365 (3%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFMEKY-HGKIK 70
           G W +   + + + +V    K   S  +I +D+S + ++DT GA LI         G ++
Sbjct: 12  GTWTA-SFAPVLERMVADAEKLAGSPQSIFIDVSEVAKLDTFGAWLIERLRRSLTQGTVE 70

Query: 71  LQ--GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
            Q  G+S +     SL+    R +     P       +   +   IG+ +          
Sbjct: 71  AQIAGLSANYS---SLVDEVRRVR---ATPVVDAGTITITGMLDQIGRAVAGVAGTVAGL 124

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             +LG V++  G        F+  L S +  M  V    VP+++LI+F+ G +IAQQG F
Sbjct: 125 IDMLGAVLAAGGRVLIHPRSFR--LTSTVHHMEQVCWRAVPIIVLITFLIGCIIAQQGIF 182

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
              +FGA+IF +D++ +L LREIGVLL A+M+AGRSGSA  AE+GSMK+ EEIDA+RTMG
Sbjct: 183 HFRRFGADIFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMKMREEIDALRTMG 242

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
            D + +L+ PR+ AL+++LP+L  L   +A+ G  +V W Y  +    F  R     ++ 
Sbjct: 243 FDPIEVLVLPRMLALVLALPILAFLGAMAALYGGGLVAWLYGGVDPEAFLLRLRDAISID 302

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   G++KAP MA  IGIVA  EG AV   + SLG+  T  VV+ I  VI++D +FAIF+
Sbjct: 303 HFIVGIVKAPVMAAVIGIVACVEGLAVQGSAESLGQHTTASVVKGIFFVIVMDGVFAIFF 362

Query: 369 FAIGI 373
            +IG+
Sbjct: 363 ASIGM 367


>gi|254487283|ref|ZP_05100488.1| ABC transporter, inner membrane subunit [Roseobacter sp. GAI101]
 gi|214044152|gb|EEB84790.1| ABC transporter, inner membrane subunit [Roseobacter sp. GAI101]
          Length = 369

 Score =  218 bits (554), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/337 (38%), Positives = 203/337 (60%), Gaps = 12/337 (3%)

Query: 41  IVDLSAITEIDTIGAELIMYFMEKYHG---KIKLQGVSTHIEQLFSLISFTHRK-KIKNQ 96
           ++D+S +T IDT GA L++Y  ++      ++++ G S    QL  ++  +     I   
Sbjct: 41  VIDISGLTRIDTAGAWLLVYAQDRLAAPGKRVEITGTSDAQAQLIDVVRASMPPADIAEP 100

Query: 97  KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156
           KP+      +  +    +G+ +      +      LG V++          +F+  L SL
Sbjct: 101 KPK------TLADQVETLGRMVTSGARKTVELTSFLGQVVATMAGTLIHPRRFR--LTSL 152

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +     VG++ VP+V L+SF+ G V+A QGA QL QFGAE+F +DL++I  LRE+G+LLT
Sbjct: 153 VHHCQEVGLNAVPIVALMSFLIGVVLAFQGAVQLRQFGAEVFVVDLIAISVLRELGILLT 212

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A+++AGRSGSA  A IGSMK+ EEIDA+RT+GLD V IL+ PR+ AL++ LP L +LA+ 
Sbjct: 213 AIIVAGRSGSAFTAAIGSMKMREEIDAMRTIGLDPVTILVVPRVLALMLMLPALGLLADI 272

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           S ++G +++ W    +  AVF SR      + +   G+IKAPF A  IGI+   EG  VG
Sbjct: 273 SGLVGGAVMSWIELGVSPAVFQSRLVGNTDVWHFGVGMIKAPFFALIIGIIGCYEGMKVG 332

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
             + SLG+  +T VV SI +VI++D++F+IF+  +G+
Sbjct: 333 GDAESLGRLTSTSVVLSIFMVIVMDAMFSIFFAIVGV 369


>gi|260430754|ref|ZP_05784726.1| ABC transporter, inner membrane subunit [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260418195|gb|EEX11453.1| ABC transporter, inner membrane subunit [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 374

 Score =  216 bits (550), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 122/346 (35%), Positives = 197/346 (56%), Gaps = 12/346 (3%)

Query: 33  KSIQSDSA--IVDLSAITEIDTIGAELIMYFMEKYHG---KIKLQGVSTHIEQLFSLISF 87
           +++  D+   + DLS +  +DT GA LI     +       +  + V+     L   ++ 
Sbjct: 36  RALHPDAKRIVFDLSGLGSLDTGGAWLICDLARRASAAGATVTYENVTATQSALLETVAQ 95

Query: 88  THRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSY 147
               +I  + P R F           +G++ V    D+ S    LGL +          +
Sbjct: 96  NIAAEIPAEAPPRGFV-----PWLESLGRRTVGAGRDTASMLSFLGLTLHRLARTLVMPW 150

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           + +    +L+ QM   G+  +P+V L+ F+ G V+A QGA QL QFGAEIF ++L+SI  
Sbjct: 151 RLR--RAALVSQMEETGLKALPIVALMGFLIGVVLAFQGATQLKQFGAEIFVVELISISV 208

Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267
           LRE+GVLLTA+++AGRSGSA  A IGSMK+ EEIDA++T+GLD + +L+ PR+ AL+I L
Sbjct: 209 LRELGVLLTAIIVAGRSGSAFTASIGSMKVQEEIDAMQTLGLDPIEVLVVPRVLALLIML 268

Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327
           P+L  +A+ + + G +++ W    +   +F +R      + ++  GLIKAPF A  I ++
Sbjct: 269 PILGFVADMAGLFGGALMSWIDLGVSPGMFVTRLKENTDVWHLAVGLIKAPFFAVVIAVI 328

Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           A  +   V   S S+G++ T+ VVQ+I +VI ID+LF+IF+  +G+
Sbjct: 329 ACWQAMQVKGSSQSVGQRTTSSVVQAIFMVIAIDALFSIFFSEVGV 374


>gi|85373087|ref|YP_457149.1| ABC-type transport system permease component [Erythrobacter
           litoralis HTCC2594]
 gi|84786170|gb|ABC62352.1| ABC-type transport system permease component [Erythrobacter
           litoralis HTCC2594]
          Length = 370

 Score =  216 bits (549), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 123/371 (33%), Positives = 206/371 (55%), Gaps = 14/371 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G TV R AG +    I  I  D+     ++++   + VDL  +++IDT+GA +    
Sbjct: 12  QDDGTTVLRLAGPYLVSTIGPIDQDL-----RALEGGFSAVDLGDVSQIDTVGAWMACTV 66

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
              +  +I+    S    +L   +  +  K      P+R      F+ +    G+++V+F
Sbjct: 67  AGAHDAEIR--NASDRASRLIDAVQGSINKA--ETTPERDPL---FRRVAMMTGERVVEF 119

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
            ++        G +++  G       +F     +L RQ+  VG++ +P++ L+SF+ G V
Sbjct: 120 GHNLLDLLSFAGAIVAGFGRLLLHPGRFPH--KALFRQLELVGINALPIIGLMSFLIGIV 177

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IAQQGA QL QFGAE  +++L+  + +RE+GVL+TA+M+AGRSGSA  A+IG+MK+ EE+
Sbjct: 178 IAQQGAVQLEQFGAETLTVNLVGRITMRELGVLMTAIMVAGRSGSAFAAQIGTMKLTEEV 237

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+RT+G+  V  L+ PRI A ++ +PLL   +   AI+G ++V      IPF  F  R 
Sbjct: 238 DAMRTIGISPVEALVLPRILAAVLMMPLLGFYSACVAIVGGAVVSEFALGIPFWNFLERI 297

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                  +++ GLIKAP     + +    +G  V  +S  +G + T  VVQ+I +VI++D
Sbjct: 298 QDVVPTYDLWVGLIKAPVFGLIVALAGCYQGMQVRGNSEEVGSRTTKAVVQAIFMVIVLD 357

Query: 362 SLFAIFYFAIG 372
           + FA+F+  IG
Sbjct: 358 AFFAVFFTEIG 368


>gi|220924819|ref|YP_002500121.1| hypothetical protein Mnod_4961 [Methylobacterium nodulans ORS 2060]
 gi|219949426|gb|ACL59818.1| protein of unknown function DUF140 [Methylobacterium nodulans ORS
           2060]
          Length = 386

 Score =  213 bits (543), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 128/368 (34%), Positives = 209/368 (56%), Gaps = 16/368 (4%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           R +G W + +   +             +    +DLS ++ +DT+GA    + +E+   +I
Sbjct: 27  RLSGRWTADQAPAVEAAAAGIAASPAGAGRIQIDLSGLSRLDTLGA----WVLERTRSEI 82

Query: 70  KLQGVSTHIEQLFSLISFTHR---KKIKNQKPQRSFFYN---SFKNLHYHIGKKIVKFIN 123
              G +      ++     HR   +++  ++P+ +          +L   +G  + +   
Sbjct: 83  AAAGRAVE----YAGARPEHRILLREVAYREPETAPARRRGLGPVDLLAGLGAGMRQLGA 138

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
           +  S    LG V++      A    F+    + + QM  + + G P+++LI+F+ G ++ 
Sbjct: 139 EGLSWLGFLGEVVAACLRVLARPRSFR--RAAFVNQMEQIALRGTPIIMLIAFLVGCIVT 196

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           QQG  QL +FGA+ F ++++ IL LRE+GVLLTA+M+AGRSGSA  AEIGSM++ EE+DA
Sbjct: 197 QQGIIQLQRFGAQSFVVNMIGILTLRELGVLLTAIMVAGRSGSAFTAEIGSMRMREEVDA 256

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R MGLD + ILI PRI AL+++LP+L  LA+ +A+ G ++    Y ++    F +R  +
Sbjct: 257 LRVMGLDPIEILIVPRILALMMALPMLGFLADLAALAGGALTSLAYGNLSLDAFLARLQN 316

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             +  +   GLIKAPFMA  IGI+A  EGF V   + SLG+ VT  VV+SI +VI++D +
Sbjct: 317 AVSYRHALVGLIKAPFMALIIGIIATSEGFRVEGSAESLGRHVTASVVKSIFMVIVLDGV 376

Query: 364 FAIFYFAI 371
           FAIF+ AI
Sbjct: 377 FAIFFAAI 384


>gi|170743041|ref|YP_001771696.1| hypothetical protein M446_4933 [Methylobacterium sp. 4-46]
 gi|168197315|gb|ACA19262.1| protein of unknown function DUF140 [Methylobacterium sp. 4-46]
          Length = 394

 Score =  211 bits (536), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/368 (34%), Positives = 205/368 (55%), Gaps = 16/368 (4%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           R  G+W + +   +                  VDLS +  +DT+GA    + +E+   +I
Sbjct: 35  RLTGSWTADQAPAVEAAAAAIAAPGEPGPRVQVDLSGLVRLDTLGA----FVLERTRSEI 90

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKN------QKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           +  G +      ++     HR  ++         P          +    +G  + +   
Sbjct: 91  EAAGRAVD----YAGARPEHRILLREVAYRRDTPPPPRRRRLGLLDGLEALGAGLRRLGA 146

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
           +  S    LG V++      A   +F+    S + QM  +   G P+++LI+F+ G ++ 
Sbjct: 147 EGLSWLGFLGEVVAACLRVLARPRRFRA--ASFVNQMEQIAYRGTPIIMLIAFLVGCIVT 204

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           QQG  QL +FGA+ F ++++ IL LRE+GVLLTA+M+AGRSGSA  AEIGSM++ EE+DA
Sbjct: 205 QQGIIQLQRFGAQSFVVNMIGILTLRELGVLLTAIMVAGRSGSAFTAEIGSMRMREEVDA 264

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R MGLD + ILI PRI AL+++LP+L  LA+ +A++G ++    Y ++ F  F +R  +
Sbjct: 265 LRVMGLDPIEILIVPRILALMLALPMLGFLADVAALLGGALTSMAYGNLSFDAFLARLQA 324

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             ++ +   G++KAPFMA  IGI+A  EGF V   + SLG+ VT  VV+SI +VI++D +
Sbjct: 325 VISVRHGLVGMLKAPFMALIIGIIATSEGFRVEGSAESLGRHVTASVVKSIFMVIVLDGV 384

Query: 364 FAIFYFAI 371
           FAIF+ AI
Sbjct: 385 FAIFFAAI 392


>gi|312115045|ref|YP_004012641.1| hypothetical protein Rvan_2318 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311220174|gb|ADP71542.1| protein of unknown function DUF140 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 385

 Score =  211 bits (536), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 111/271 (40%), Positives = 172/271 (63%), Gaps = 15/271 (5%)

Query: 105 NSFKNLHYHIGKKIVK---FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY 161
             F +    IG+  ++   F+ ++ +    LG V+ + G F     + K F      Q+ 
Sbjct: 126 RRFLSAATSIGRDAIRLTMFLGETTAA---LGRVVVHPGRF-----RIKAF----THQLQ 173

Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221
             G+S VP++ L+SF+ G V+ QQ AFQL +FGAE  SID++ IL LRE+GV+L AVM+A
Sbjct: 174 QTGLSAVPIIALVSFLIGGVVMQQSAFQLQKFGAETMSIDMLGILALRELGVILAAVMVA 233

Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281
           GRS SA  A+IG+MK+ EEIDA+RT+G+D +  L+ PR+ AL+I+LPLL  LA+  A+ G
Sbjct: 234 GRSASAFTAQIGTMKMREEIDAMRTLGIDPIETLVLPRVLALMIALPLLVFLADMMALAG 293

Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341
            +++   Y  +   ++  R +S+    +++ GLIKAPF A  IG+V   EG +    + S
Sbjct: 294 GAVMAKLYLSLDTDMYLQRLNSSVQAKHLYVGLIKAPFAALVIGLVGCLEGLSAQGSAES 353

Query: 342 LGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           +G +VTT VV++I +V+++D++FAIF  A G
Sbjct: 354 VGTQVTTAVVKAIFLVLVLDAVFAIFLSAAG 384


>gi|84516868|ref|ZP_01004226.1| ABC transporter, inner membrane subunit [Loktanella vestfoldensis
           SKA53]
 gi|84509336|gb|EAQ05795.1| ABC transporter, inner membrane subunit [Loktanella vestfoldensis
           SKA53]
          Length = 380

 Score =  210 bits (535), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/343 (36%), Positives = 196/343 (57%), Gaps = 17/343 (4%)

Query: 37  SDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK------LQGVSTHIEQLFSLISFTHR 90
           S + +VD++ ++ +DT GA    +F+    G+        + G S     L   +     
Sbjct: 49  SRAEVVDIAQLSHMDTAGA----WFLLDLAGRTSAGAASVITGASDAQTLLIEAVRTNLP 104

Query: 91  KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFK 150
            K    KP      + F+ L    G+++    + +      LG VI+            +
Sbjct: 105 PKAAGAKPAVRL-VDHFETL----GRRVALAGSHALEMLSFLGQVIAAMARVIRHPRALR 159

Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210
             L S++     VG+  VP+V L++F+ G V+A QG+ QL QFGAE+F +DL++I  LRE
Sbjct: 160 --LTSVVHHCQQVGLQAVPIVALMAFLIGVVLAFQGSAQLRQFGAEVFVVDLIAISILRE 217

Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
           +G+LLTA+++AGRSGSA  A IGSMK+ EEIDA+RT+GLD V IL+ PR+ AL++ LP L
Sbjct: 218 LGILLTAIIVAGRSGSAFTAAIGSMKMREEIDAMRTLGLDPVAILVVPRVLALVLMLPAL 277

Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330
            ++AN S + G +++ W   D+  AVF +R  S   + +   G+IKAP  A  IGI+   
Sbjct: 278 GLIANVSGLFGGALMSWIELDVSPAVFQARLVSNTDVWHFNVGMIKAPVFALIIGIIGCY 337

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           +G  VG  + SLG++ +  VV +I +VI+ D+LF+IF+  +G+
Sbjct: 338 QGMKVGGDAESLGRQTSASVVMAIFMVIVADALFSIFFAIVGV 380


>gi|218886600|ref|YP_002435921.1| hypothetical protein DvMF_1505 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218757554|gb|ACL08453.1| protein of unknown function DUF140 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 430

 Score =  207 bits (528), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/373 (33%), Positives = 204/373 (54%), Gaps = 11/373 (2%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINK-----SIQSDSAIV--DLSAITEIDTIGAELIMY 60
           V  F+G W    I  +   ++    +     S+Q D+ +V  DL+ +T +DT GA+L+  
Sbjct: 62  VLTFSGVWDVASIGRMTARLLRRCAEVGNACSVQGDAPVVHLDLAEVTRLDTAGAQLLCR 121

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
                        V  H+      +     + I      R+   +        IG  IV+
Sbjct: 122 AAASM--ATAGARVVWHVSDHGQSMLLDRVRAIDISAVPRARRISPVVGALNAIGGSIVE 179

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
            +  + +    LG+ + +     A  ++ +   +S++  M   G+  VP+V L++F+ G 
Sbjct: 180 ELEQARAIIGFLGMFLVSLAAAVARPWRLR--WVSIVHHMEQTGIQAVPIVALLTFLIGL 237

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V A  G+ Q ++FGA++F ++L+ +  LRE+GVLLTA+++AGRSGS+  A+IG+M  NEE
Sbjct: 238 VTAYMGSEQFTRFGAQVFVVNLIEVSTLRELGVLLTALIVAGRSGSSFTAQIGAMVANEE 297

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +DA+R+MGLD + +L+ PR+ AL++ LP+LT +A+F  ++G  I  W    I    F  R
Sbjct: 298 VDAMRSMGLDPMEVLVIPRVVALVLMLPVLTFIADFMGVLGGGIASWLSLGISPGAFAVR 357

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
           F     LAN  TGL+KAPF A  IGIV   +GF V   + S+G+  T  VV+SI +VI+ 
Sbjct: 358 FQEITRLANFVTGLVKAPFFALIIGIVGCFQGFRVTGSAESVGRLTTQAVVESIFLVIVA 417

Query: 361 DSLFAIFYFAIGI 373
           ++ FAI + ++G+
Sbjct: 418 NAGFAILFMSLGV 430


>gi|149187032|ref|ZP_01865339.1| ABC-type transport system permease component [Erythrobacter sp.
           SD-21]
 gi|148829321|gb|EDL47765.1| ABC-type transport system permease component [Erythrobacter sp.
           SD-21]
          Length = 369

 Score =  207 bits (528), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 119/369 (32%), Positives = 206/369 (55%), Gaps = 14/369 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            G +V   +G +    +  + +D+     + +    A +DLS ++EIDT+GA L      
Sbjct: 13  EGGSVLALSGPYLVSTVGAVDEDL-----RGLDEPLARIDLSEVSEIDTVGAWLACQLAS 67

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           ++  +I   G S    +L   ++      + +++   +     +  +   +G+K+    +
Sbjct: 68  RHGAEIT--GASERATRLLGALT-----GMDSEQALSAPRLPVWSRVPEAMGEKMFNARS 120

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
            +      LG  + + G    +  +F+   ++L+ Q+  VGVS +P++ L+SF+ G VIA
Sbjct: 121 GAIGVISFLGAALISAGNLIRNPRRFR--TVALVHQVELVGVSALPIIGLMSFLIGIVIA 178

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           QQGA QL+ FGAE  +++L+  + LRE+GVL+TA+M+AGRSGSA  A++G+MK+ EE+DA
Sbjct: 179 QQGAVQLAAFGAETLTVNLVGRITLRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEVDA 238

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +RT+G+  +  L+ PRI + ++ +PLL   A+  AIIG ++V      IPF  F SR   
Sbjct: 239 MRTIGISPMEALVIPRILSAVLMMPLLGFYASCMAIIGGAVVGDLMLGIPFWTFLSRIQE 298

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +++ GLIKAP     +G+     G  V  +S  +GK+ T  VV +I  VI++D+ 
Sbjct: 299 VVPTYDVWVGLIKAPVFGLIVGLAGCYNGMQVEGNSEEVGKRTTLSVVAAIFAVIVLDAF 358

Query: 364 FAIFYFAIG 372
           FA+F+  +G
Sbjct: 359 FAVFFTELG 367


>gi|159044594|ref|YP_001533388.1| hypothetical protein Dshi_2050 [Dinoroseobacter shibae DFL 12]
 gi|157912354|gb|ABV93787.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
          Length = 384

 Score =  206 bits (524), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 125/338 (36%), Positives = 201/338 (59%), Gaps = 11/338 (3%)

Query: 37  SDSAIVDLSAITEIDTIGAELIMYFMEKYHGK-IKLQGVSTHIEQLFSLISFTHRKKIKN 95
           + S  +DLS I  IDT GA L+    E   G+ ++L G    + +L + ++     K + 
Sbjct: 57  AGSLTLDLSGIGRIDTAGAWLLA---ELARGEGVRLVGAPDKVARLIANVA-----KAEP 108

Query: 96  QKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLS 155
           + P+R+    +  +    +G+++V+          +LGLV++  G       +F+  + +
Sbjct: 109 EHPERTETPPTLTDRLERLGRQVVEGTKFLGGLTGMLGLVLARFGRALRHPREFR--MTA 166

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+     VG+  VP+V L++F+ G V+A QGA QL QFGAE+F +DL+SI  LRE+G+LL
Sbjct: 167 LVHHCEEVGLRAVPIVALMAFLIGIVLAFQGASQLRQFGAEVFVVDLISISILRELGILL 226

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA+++AGR+ S+  A IGSMK+ EEIDA+RT+GLD   +L  PR+ AL+I LP+L ++AN
Sbjct: 227 TAIIVAGRTASSFTAAIGSMKMREEIDAMRTLGLDPAMLLFLPRVLALLIMLPILGLIAN 286

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
            S ++G +++ W    I  A+F +R      + +   GL+KAPF A  IG+V    G  V
Sbjct: 287 LSGLLGGALMSWIELGISPAMFQTRLIEGTDINHAVVGLVKAPFFAILIGVVGCHAGMQV 346

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
             ++ SLG+  +  VV +I  VI+ D+ F+IF+  +GI
Sbjct: 347 EGNAESLGRMTSGAVVTAIFAVIVTDAAFSIFFAQMGI 384


>gi|304319773|ref|YP_003853416.1| hypothetical protein PB2503_00972 [Parvularcula bermudensis
           HTCC2503]
 gi|303298676|gb|ADM08275.1| hypothetical protein PB2503_00972 [Parvularcula bermudensis
           HTCC2503]
          Length = 380

 Score =  206 bits (524), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 130/355 (36%), Positives = 201/355 (56%), Gaps = 13/355 (3%)

Query: 25  DDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHI------ 78
           D  + A+N   + D A +DLS I  +DT GA ++     +  G+ + Q ++T        
Sbjct: 33  DSKIRALNFGPREDLAEIDLSQIEALDTAGALMLQRLRHRCMGEGRPQAIATLTGMTDPQ 92

Query: 79  EQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISN 138
            +L   ++  H    +   P+R     SF  L   +G+  +   N+  +    +G V++ 
Sbjct: 93  HELMERMA-AHIADCEGDPPRR----KSFILLLNRVGQGTIAVGNEGLAILSFVGSVVAR 147

Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198
                 S  +F+  L + +  M   G++   +V L+SF+ GAV+A  GA  LS+FGAE+F
Sbjct: 148 LAGTIMSPARFR--LTATVAHMEEAGLNSTLIVGLMSFLIGAVVAFMGARVLSEFGAEVF 205

Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258
           S++L+ I  LRE GVLLTA++IAGRSGSA  A IGSMK+ EEIDA+R +G+  +  LI P
Sbjct: 206 SVELVGISVLREFGVLLTAILIAGRSGSAFTASIGSMKLREEIDAMRALGISPLDALILP 265

Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318
           R  AL+++LP+L  LA F  ++G  +V W   DIP  +F  R     T+ N+F GL+KAP
Sbjct: 266 RTIALVLTLPVLAFLAGFLGLLGGGVVGWLALDIPPQLFIGRLQEIVTVENLFVGLVKAP 325

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           F A  I +V    G +V   +  LG++ T  VVQS+ +VI++D+LFA+ +  + I
Sbjct: 326 FFAFVIAVVGCYHGMSVENSAEELGRRTTMAVVQSLFLVILLDALFAMLFLELDI 380


>gi|260752530|ref|YP_003225423.1| hypothetical protein Za10_0287 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|283856391|ref|YP_162753.2| hypothetical protein ZMO1018 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|258551893|gb|ACV74839.1| protein of unknown function DUF140 [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|283775390|gb|AAV89642.2| protein of unknown function DUF140 [Zymomonas mobilis subsp.
           mobilis ZM4]
          Length = 366

 Score =  205 bits (521), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/339 (37%), Positives = 185/339 (54%), Gaps = 15/339 (4%)

Query: 37  SDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96
           SD  ++DLS +  +DT GA L+    +  + ++K  G ++ +  +   IS   R      
Sbjct: 38  SDVKVIDLSNLHRMDTAGAWLVHKLAQDNNAEVK--GTNSAVAHILDQISHYDRPLPPEP 95

Query: 97  KPQRSFFYNSF---KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFL 153
           K      Y      KN   H+   IV  +N          L++S     C  S   +  L
Sbjct: 96  KAVSPLIYTLTGVGKNT-VHVWYTIVGLVN------FFGALLVSIWHTICHPS---RLRL 145

Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
            ++I QM  VGV+ + +V L+S + G VIAQQGA QL QFGAEI+SI+L+  L  RE+GV
Sbjct: 146 TAIICQMETVGVNALAIVGLMSILVGVVIAQQGAVQLRQFGAEIYSINLVGRLSFRELGV 205

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           L+TA+M+AGRSGSA  A+IGSM + EEIDA+R +G+  +  L+ PR  A II +PLL   
Sbjct: 206 LMTAIMVAGRSGSAFAAQIGSMNLAEEIDAMRIIGVSPMESLVLPRFLASIIMMPLLGFY 265

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
           A  +A+IG  ++ W   DIP   FF+R        ++  GL+KAP     I I    +G 
Sbjct: 266 ATIAAVIGGGLLCWTVLDIPPTTFFTRLREVIPYTDVAVGLVKAPIFGALIAIAGCFQGT 325

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
            V  ++  LG   T  VV SI +VI++D+ FA+F+  IG
Sbjct: 326 QVKGNAEQLGYCTTKAVVHSIFLVIVLDAFFAVFFSEIG 364


>gi|241761770|ref|ZP_04759856.1| protein of unknown function DUF140 [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|241373684|gb|EER63244.1| protein of unknown function DUF140 [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 366

 Score =  205 bits (521), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/339 (37%), Positives = 185/339 (54%), Gaps = 15/339 (4%)

Query: 37  SDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96
           SD  ++DLS +  +DT GA L+    +  + ++K  G ++ +  +   IS   R      
Sbjct: 38  SDVKVIDLSNLHRMDTAGAWLVHKLAQDNNAEVK--GTNSAVAHILDQISHYDRPLPPEP 95

Query: 97  KPQRSFFYNSF---KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFL 153
           K      Y      KN   H+   IV  +N          L++S     C  S   +  L
Sbjct: 96  KAVSPLIYTLTGVGKNT-VHVWYTIVGLVN------FFGALLVSIWHTICHPS---RLRL 145

Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
            ++I QM  VGV+ + +V L+S + G VIAQQGA QL QFGAEI+SI+L+  L  RE+GV
Sbjct: 146 TAIICQMETVGVNALAIVGLMSILVGVVIAQQGAVQLRQFGAEIYSINLVGRLSFRELGV 205

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           L+TA+M+AGRSGSA  A+IGSM + EEIDA+R +G+  +  L+ PR  A II +PLL   
Sbjct: 206 LMTAIMVAGRSGSAFAAQIGSMNLAEEIDAMRIIGVSPMESLVLPRFLASIIMMPLLGFY 265

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
           A  +A+IG  ++ W   DIP   FF+R        ++  GL+KAP     I I    +G 
Sbjct: 266 ATIAAVIGGGLLCWTVLDIPPTTFFTRLREVIPYTDVAVGLVKAPIFGALIAIAGCFQGT 325

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
            V  ++  LG   T  VV SI +VI++D+ FA+F+  IG
Sbjct: 326 QVKGNAEQLGYCTTKAVVHSIFLVIVLDAFFAVFFSEIG 364


>gi|163744195|ref|ZP_02151555.1| ABC transporter, inner membrane subunit [Oceanibulbus indolifex
           HEL-45]
 gi|161381013|gb|EDQ05422.1| ABC transporter, inner membrane subunit [Oceanibulbus indolifex
           HEL-45]
          Length = 376

 Score =  205 bits (521), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/337 (37%), Positives = 199/337 (59%), Gaps = 9/337 (2%)

Query: 39  SAIVDLSAITEIDTIGAELIMYFME--KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96
           ++++D++ +  IDT GA +++         G   L+G +    QL   +  +        
Sbjct: 47  ASVIDIAGLARIDTAGAWVLIDLQAHATVPGGAALEGATQAQAQLIETVRRSMLSDAVAA 106

Query: 97  KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156
            P +S       +    +G+ +V   + + +    LG V++  G   A   + +  L SL
Sbjct: 107 PPTKSV-----GDRLEILGRTVVLGAHKTVALISFLGQVVATMGGILAHPSRLR--LTSL 159

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +     VG++ VP+V L+SF+ G V+A QGA QL QFGAE+F +DL++I  LRE+G+LLT
Sbjct: 160 VHHCQEVGLNAVPIVALMSFLIGVVLAFQGAAQLRQFGAEVFVVDLIAISVLRELGILLT 219

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A+++AGRSGSA  A IGSMK+ EE+DA+RT+GLD V IL+ PR+ AL++ LP L  +A+ 
Sbjct: 220 AIIVAGRSGSAFTAAIGSMKMREEVDAMRTIGLDPVTILVVPRVLALMLMLPALGFIADI 279

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           S ++G +I+ W    +  AVF  R  S   + +   G+IKAPF A  IGI+   EG  VG
Sbjct: 280 SGLLGGAIMSWIDLGVSPAVFQMRLTSNTDVWHFGVGMIKAPFFALIIGIIGCFEGLKVG 339

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
             + SLG+  +T VV SI +VI+ D++F+IF+  +G+
Sbjct: 340 GDAESLGRLTSTSVVLSIFMVIVADAMFSIFFAIVGV 376


>gi|87200858|ref|YP_498115.1| hypothetical protein Saro_2845 [Novosphingobium aromaticivorans DSM
           12444]
 gi|87136539|gb|ABD27281.1| protein of unknown function DUF140 [Novosphingobium aromaticivorans
           DSM 12444]
          Length = 372

 Score =  204 bits (519), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/340 (34%), Positives = 192/340 (56%), Gaps = 8/340 (2%)

Query: 33  KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKK 92
           + I    A +DLSA+T +DT+GA  + + + +  G  ++   S   ++L   IS      
Sbjct: 39  RHITDPVARIDLSAVTAMDTVGAWTV-WRLSRDTGA-EIVACSEEAQKLVDAISKADSNA 96

Query: 93  IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGF 152
              + P+   F    + +   +G  ++     +      LG VI   G       +F+  
Sbjct: 97  HSIEPPRLPLF----QRVPEKVGDAMIGLGLGAVQVLGFLGQVILAIGTLVRHPSRFR-- 150

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           + +L+ QM  VGV+ + ++ L+SF+ G VIAQQGA QL QFGAEI++++L+  L LRE+G
Sbjct: 151 MKALVHQMELVGVNALAIIGLMSFLVGIVIAQQGAVQLRQFGAEIYTVNLVGRLTLRELG 210

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
           VL+TA+M+AGRSGSA  A++G+MK+ EE+DA+RT+G+  +  L+ PRI A ++ +PLL  
Sbjct: 211 VLMTAIMVAGRSGSAFAAQLGTMKLTEEVDAMRTIGVSPMEALVVPRILATMVMMPLLGF 270

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
            + F  IIG + +      IPF  F +R      L +++ G+ KAP     + +    +G
Sbjct: 271 YSAFIGIIGGAFLSSLTLGIPFFTFLARIQEVVPLHDVWVGITKAPVFGLIVAVAGCYQG 330

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
             V  ++  +G + T  VV +I +VI++D+ FA+F+  IG
Sbjct: 331 MQVKTNAEEVGTRTTAAVVMAIFMVIVLDAFFAVFFTEIG 370


>gi|149374946|ref|ZP_01892719.1| putative permease of ABC transporter [Marinobacter algicola DG893]
 gi|149360835|gb|EDM49286.1| putative permease of ABC transporter [Marinobacter algicola DG893]
          Length = 374

 Score =  203 bits (516), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 120/364 (32%), Positives = 205/364 (56%), Gaps = 10/364 (2%)

Query: 12  AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EKYHGK 68
           +G+W  P    +  DV  A+ K +  D   V+L+ I  +DT GA L++  +   E +   
Sbjct: 17  SGDWTLPNYGSLKRDVQNAVLKEV-PDGHSVNLATINALDTAGASLLVDLLGAHELHELT 75

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
            +   +S+  ++L  L++      + + + +++F  N        IG+ I  F +     
Sbjct: 76  EQTPELSSERQELLRLVA----NAMASPEGEKAFCSNPITEFLAGIGENIEDFWHQQRLL 131

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
               G +++      A+ ++++  + SL+  ++  G++ +P+V L++F+ GAV+A  GA 
Sbjct: 132 IGFTGQILATLASILATPWRWR--ITSLVAHVHQTGLNALPIVALLTFLVGAVVAFLGAT 189

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L  FGA I++++L++   LRE GVLL A+++AGR+ SA  A++GSMK NEEIDA+RT G
Sbjct: 190 ILDDFGATIYTVNLVAFSFLREFGVLLAAILLAGRTASAFTAQLGSMKANEEIDALRTFG 249

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           L  V +L+ PR+ A++ISLP+LT +   S IIG S+V     DI      +   +   + 
Sbjct: 250 LSPVELLVIPRVLAMVISLPILTFVGMISGIIGGSVVCVLALDISVPQILNILETKVKVV 309

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           ++  GL KAP  A  I ++   EGF     + S+G+  T+ VVQSI +VI++DS+ AIF+
Sbjct: 310 HLLVGLGKAPVFAFVIAVIGCLEGFKASGSAQSVGEHTTSAVVQSIFMVILLDSIAAIFF 369

Query: 369 FAIG 372
             +G
Sbjct: 370 MEMG 373


>gi|119385048|ref|YP_916104.1| hypothetical protein Pden_2317 [Paracoccus denitrificans PD1222]
 gi|119374815|gb|ABL70408.1| protein of unknown function DUF140 [Paracoccus denitrificans
           PD1222]
          Length = 364

 Score =  201 bits (511), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/332 (35%), Positives = 189/332 (56%), Gaps = 10/332 (3%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
           ++LS +T +DT  A    Y   +      L G++    QL   +     ++   Q    S
Sbjct: 43  LELSGLTRLDTAAA---WYLTGREREGASLDGLTGTQAQLLDTV-----RQALPQPEAES 94

Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY 161
                ++ +    G+++V  +      A  LG  ++           F+    SL+    
Sbjct: 95  AGPAGWRLMLEQTGRRMVAALVFLREIAEYLGRFLAALARGIRHPGDFR--FTSLVYHCQ 152

Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221
             G+  VP+V L+SF+ G V+A QGA QL QFGAE+F IDL++I  LRE+G+LLTA+++A
Sbjct: 153 ETGLRAVPIVALMSFLIGIVLAFQGAVQLRQFGAEVFVIDLIAISILRELGILLTAIIVA 212

Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281
           GR+ SA+ A IGSMK+NEEIDA+RT+GLD   +LI PR+ ALII+LP+L ++AN + ++G
Sbjct: 213 GRTASALTASIGSMKMNEEIDAMRTLGLDPDMVLILPRVLALIITLPILGLIANIAGLVG 272

Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341
            +++ W    I  ++F  R  +  ++ ++  GL KAP  A  IG++    G  VG  + S
Sbjct: 273 GALMSWIELGISPSMFRYRLLADTSVDHVIVGLSKAPVFALIIGVIGCHAGMKVGKDAES 332

Query: 342 LGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           LG + +  VV +I  VI+ D+LF+IF+  +G+
Sbjct: 333 LGAETSRAVVNAIFAVIVADALFSIFFSEVGL 364


>gi|209964745|ref|YP_002297660.1| ABC transporter, permease protein, putative [Rhodospirillum
           centenum SW]
 gi|209958211|gb|ACI98847.1| ABC transporter, permease protein, putative [Rhodospirillum
           centenum SW]
          Length = 384

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 197/364 (54%), Gaps = 9/364 (2%)

Query: 12  AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKL 71
            G W    +  + D  +        + S  +DLS +  +DT GA LI    E+   +   
Sbjct: 28  GGRWDLSAVPRL-DQRLRTAGPDRPASSVCIDLSGLVALDTAGALLIDRLAERLRAEGHT 86

Query: 72  QGVSTHIEQLFSLISFTHRKKIKNQK--PQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
             +      L +L+    R    +    P+    Y    +L   +G+  V+   D+    
Sbjct: 87  VAIVGARPDLCALLREVRRASRADSPALPR----YEPMHDLLERVGRATVEAGQDAAKLL 142

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
             LG+V            +F+  +   +  +  VG++ +P+V L+SF+ G V+A QGA Q
Sbjct: 143 GFLGMVTVTALRLVRQPRRFR--MTPFVFHLEQVGLNALPIVGLLSFLIGIVLAYQGADQ 200

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L  FGAEIF ++L+ I  LREIG+L+T++++AGRSGSA  A+IG+MK+N+E+DA+RT+GL
Sbjct: 201 LRLFGAEIFVVNLLGIGVLREIGILMTSIIVAGRSGSAFTAQIGTMKVNQEVDAMRTLGL 260

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
           D V +L+ PR+ AL+++LPLL   AN  A+ G +++ + Y DI F  F  +         
Sbjct: 261 DPVELLVLPRLLALMVALPLLGFYANVVALFGGAVMAYSYLDITFGQFLKQLQLAVNETT 320

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           +F GL+KAP  A  I +V   EG  V   + S+G+  T  VV SI +VI++D+LF+I + 
Sbjct: 321 LFVGLVKAPVFAIVIALVGCYEGLRVTGSAQSVGQLTTRSVVVSIFLVIVLDALFSILFS 380

Query: 370 AIGI 373
            +GI
Sbjct: 381 YLGI 384


>gi|312958198|ref|ZP_07772721.1| ABC transport system permease protein [Pseudomonas fluorescens WH6]
 gi|311287629|gb|EFQ66187.1| ABC transport system permease protein [Pseudomonas fluorescens WH6]
          Length = 382

 Score =  200 bits (509), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/368 (34%), Positives = 205/368 (55%), Gaps = 17/368 (4%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDS-AIVDLSAITEIDTIGAELIMYFMEKYH 66
           + R  G+W    ++  A+   +A     Q D+ A +DL+ +  +DT GA L++  +    
Sbjct: 20  LLRITGDWT---LAHYANLKKLADKLDGQYDAGARIDLNGLGALDTAGASLLVELL---- 72

Query: 67  GKIKLQGVSTHIEQLFS-----LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
           G  +++  +   +   S     L+   +R       P+++    +   L   IG+ +   
Sbjct: 73  GPTRIEQSAEQTDCTLSAADRALLKTVYRSLNDFCVPEKAPEETAGMQLLARIGRAVDTV 132

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLS-LIRQMYYVGVSGVPVVILISFVTGA 180
             DS      +GL++     F    ++ K + ++ ++  +  VG+   P+V L++F+ GA
Sbjct: 133 WQDSKQLLGFIGLILET---FARGIFRPKRWRITPMVAHLEQVGLDAAPIVALLTFLVGA 189

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A  GA  L  FGA IF++DL++   LRE GVLLTA++IAGR+ SA  A+IGSMK NEE
Sbjct: 190 VVAFLGATVLKSFGATIFTVDLVAFSFLREFGVLLTAILIAGRTASAFTAQIGSMKANEE 249

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDAIRT+GLD + +L+ PR+ AL+++LP+LT LA  S I+G  +V     DI  A+F S 
Sbjct: 250 IDAIRTLGLDPMELLVLPRVLALLVALPMLTFLAMLSGIVGGGVVCAVALDISPAMFLSL 309

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             S   + +   G++KAP  A  I  +   EGF V   + S+G   T+ VVQSI +VI++
Sbjct: 310 LQSDIGVQHFLVGMVKAPIFAFLIAAIGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVL 369

Query: 361 DSLFAIFY 368
           D++ A+F+
Sbjct: 370 DAVAALFF 377


>gi|119897565|ref|YP_932778.1| putative ABC transporter permease [Azoarcus sp. BH72]
 gi|119669978|emb|CAL93891.1| putative ABC transporter permease protein [Azoarcus sp. BH72]
          Length = 380

 Score =  200 bits (509), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 125/357 (35%), Positives = 197/357 (55%), Gaps = 11/357 (3%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           ++  G  V R +G+W       IAD  V A+  ++Q  +A VD S +  +DT GA L++ 
Sbjct: 13  LAAAGGGVLRLSGDWTLAHYRSIAD-TVSALRANVQHGTA-VDASGLGALDTAGASLLVQ 70

Query: 61  FMEKYHGKIKLQGVSTH---IEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
            +    G   LQ +ST      +  +L+           +P+ +   ++  ++  HIG  
Sbjct: 71  LL----GHDGLQALSTDPALAPERRALLRAVADALATPPEPEPADTGSALGDVLEHIGIA 126

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +  F   +      +GL + +     A   +++  L +L   +    +  VP+V L++F+
Sbjct: 127 MGVFWRHAVGLLGFIGLTLESAFRIIAQPARWR--LTALAANLEKTALDAVPIVALLTFL 184

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            GAV+A  GA  L+ FGA IF++DL++   LRE GVLLTA+++AGR+ SA  A+IGSMK 
Sbjct: 185 VGAVVAFLGATVLADFGASIFTVDLVAFSFLREFGVLLTAILVAGRTASAFTAQIGSMKA 244

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
           NEEIDAIR +GLD V +L+ PR++AL+++LP+LT +A  S I+G  +V     DI   +F
Sbjct: 245 NEEIDAIRVLGLDPVELLVLPRVYALLLALPMLTFVAMLSGIVGGMLVCALTLDISPVMF 304

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            S F +   L +   G+ KAP  A  I ++   EGF V   + S+G+  T+ VVQSI
Sbjct: 305 LSIFENDVGLRHFIVGIAKAPIFAFLIAVIGCLEGFKVSGSAQSVGEHTTSAVVQSI 361


>gi|70733612|ref|YP_257252.1| ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68347911|gb|AAY95517.1| ABC transporter, permease protein, putative [Pseudomonas
           fluorescens Pf-5]
          Length = 382

 Score =  200 bits (508), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 127/372 (34%), Positives = 200/372 (53%), Gaps = 19/372 (5%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R  G+W     S++   +  +++    S + I DL+ +  +DT GA L++  +    G 
Sbjct: 21  LRIGGDWTLAHYSDL-KRLSQSLDGRYDSSTHI-DLNGLGALDTAGASLLVELL----GA 74

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFK--------NLHYHIGKKIVK 120
            +L   + H +     +S   R  +       + F    K         L   IG  +  
Sbjct: 75  ERLGQSAEHPD---CTLSAADRALLHTVYTSLNDFCVPVKEPEISVSVQLLSRIGSAVYT 131

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
              D+      +GL++           +++  +  ++  +   G+   P+V L++F+ GA
Sbjct: 132 VWQDTLKVLGFIGLILETLARGLLRPKRWR--ITPVVAHIEQTGLDAAPIVALLTFLVGA 189

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A  GA  L+ FGA IF++DL++   LRE GVLLTA+++AGR+ SA  A+IGSMK NEE
Sbjct: 190 VVAFLGATVLANFGASIFTVDLVAFSFLREFGVLLTAILMAGRTASAFTAQIGSMKANEE 249

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDAIRT+GLD V +L+ PR+ AL++SLP+LT LA  S I+G ++V     DI  A+F S 
Sbjct: 250 IDAIRTLGLDPVELLVLPRVLALLVSLPMLTFLAMLSGIVGGAVVCALSLDISPAMFLSL 309

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
            HS   + +   GL+KAP  A  I  +   EGF V   + S+G   T+ VVQSI +VI+I
Sbjct: 310 LHSDIGVKHFLLGLVKAPIFAFLIAAIGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVI 369

Query: 361 DSLFAIFYFAIG 372
           D++ A+F+  +G
Sbjct: 370 DAVAALFFMEMG 381


>gi|288962789|ref|YP_003453083.1| ABC transport system permease protein [Azospirillum sp. B510]
 gi|288915055|dbj|BAI76539.1| ABC transport system permease protein [Azospirillum sp. B510]
          Length = 401

 Score =  199 bits (506), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 120/365 (32%), Positives = 198/365 (54%), Gaps = 10/365 (2%)

Query: 12  AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK--- 68
           AG W + E++  A D +          +  +DLS +  +DT+GA L+    ++       
Sbjct: 44  AGRW-TLEVAAAASDALDHAAPPRDGAALRLDLSGVEALDTVGAYLLSRQADRMAADGRA 102

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
           +++ GV      LF  +      K      +R   ++   ++    G+  V    +    
Sbjct: 103 VEVVGVRPEHAALFDAVR--DAGKAPPHPIERE--HHPIHDMVVRTGETTVHAAREVLDL 158

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LGLV            + +  L S++  +   G++ +P++ L+SF+ G V+A QGA 
Sbjct: 159 VGFLGLVTVTFVRLILRPSRLR--LTSVLFHIEQTGLNALPILGLLSFLIGVVLAFQGAD 216

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           QL +FGAE++ ++L+ I  LREIG+L+TA+++AGRSGSA  A+IG+MK+N+E+DAI TMG
Sbjct: 217 QLKRFGAELYVVNLLGISVLREIGILMTAIIVAGRSGSAFTAQIGTMKVNQEVDAIGTMG 276

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD V +L+ PR  AL+I+LPLL   A+   + G +++ +   DI F  F  + HS   + 
Sbjct: 277 LDPVELLVVPRALALVITLPLLAFYADVMGLFGGAVMAYATLDITFGQFIRQLHSAIGIN 336

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
            +  GLIKAP  A  I +V   EG  V   + S+G   T  VV+ I +VI+ID++F++ +
Sbjct: 337 TVLAGLIKAPVFALVIAMVGCYEGLKVSGSAESVGIMTTKAVVEGIFLVIVIDAVFSVLF 396

Query: 369 FAIGI 373
             +G+
Sbjct: 397 SLLGV 401


>gi|311232876|gb|ADP85730.1| protein of unknown function DUF140 [Desulfovibrio vulgaris RCH1]
          Length = 401

 Score =  198 bits (504), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/367 (32%), Positives = 198/367 (53%), Gaps = 8/367 (2%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           + RF+G W     +  A   +  +    +      DL+ +  +DT GA +I  F      
Sbjct: 42  ILRFSGAWDVATAAR-ARGQLQHLAIPAECGDLTFDLTGVLRLDTAGALVITTF----RT 96

Query: 68  KIKLQGVSTHIEQLFSLISFTHR-KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
            ++ QG++  +    +  +   R   I   +       ++       IG  IV+    + 
Sbjct: 97  ALEKQGIAPLLHCAPAHNALIDRVAAIDMSEAPTVRHASALARTLNAIGASIVEETEQAV 156

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
                +G+++ +        ++F+   +SL   M   GV  VP+V L+SF+ G V A  G
Sbjct: 157 GILAFMGMLVISLVGLVLRPWRFR--WVSLCSHMEQTGVQAVPIVALLSFLIGLVTAYMG 214

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A Q ++FGA++F I+L+ I  LRE+GVLLTA+++AGRSGS+  A+IG+M  NEE+ A+R 
Sbjct: 215 AEQFARFGAQVFVINLLEISTLREMGVLLTALVVAGRSGSSFTAQIGAMVANEEVSAMRA 274

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +GLD + +L+ PR+ AL++ LP+L  +A+   I+G  +  W    I  A F +RFH    
Sbjct: 275 LGLDPIEVLVVPRVLALVVMLPILAFIADIMGILGGGVAAWGTLGIDPANFTARFHEIVH 334

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L N   G+IKAPF A  I +V   +GF V   + S+G+  T  VV++I +VI++++LFAI
Sbjct: 335 LRNFVVGMIKAPFFALVIALVGCFQGFRVTGSAESVGRLTTQAVVEAIFMVIVLNALFAI 394

Query: 367 FYFAIGI 373
            + ++G+
Sbjct: 395 LFTSLGV 401


>gi|163793381|ref|ZP_02187356.1| ABC transporter, inner membrane subunit [alpha proteobacterium
           BAL199]
 gi|159181183|gb|EDP65698.1| ABC transporter, inner membrane subunit [alpha proteobacterium
           BAL199]
          Length = 391

 Score =  198 bits (504), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/375 (32%), Positives = 214/375 (57%), Gaps = 12/375 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           + +G  V R  G W + + +   D  + A+     + S  VD ++++ +D+ GA +I   
Sbjct: 26  TRDGTLVVRLRGPW-TLQTALSVDAAIRALADRAAA-SVTVDATSLSRLDSAGAWVIQRT 83

Query: 62  MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
           + ++  +   +++ G+   ++ +    +   +       P  S       N    +G++ 
Sbjct: 84  VAQFDRRGVPVEIVGLDEGLQAILDKAAEHDQSADIAPAPTSSLL-----NFLERLGRRS 138

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           V+ ++   +   +LG+V+  +G         +G   +++ Q+   GV+ +P+V L+ F+ 
Sbjct: 139 VEGLHTGRNLLGLLGVVVVASGRIVVRPMTLRG--TAVVAQIEATGVTALPIVGLLCFLV 196

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G V+A  GA QL++FGA   +++L+ I  LREIG+LLTA+++AGRSGSA  A+IG+MK+N
Sbjct: 197 GVVLAYMGALQLTRFGAANLTVNLVGISVLREIGILLTAIIVAGRSGSAFAAQIGTMKVN 256

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           +EIDA+ TMGL  + +L+ PR+ ALII LP LT+ A+ + ++G ++V     D+    F 
Sbjct: 257 QEIDALETMGLSVIDVLVLPRVIALIIVLPALTVFADVAGLVGGAMVCMFQLDMTIGQFL 316

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           ++  +  T+ +  TGLIKAP  A AI +V    G  V   + S+G++ T  VV+SI +VI
Sbjct: 317 TQLSAGVTVWSFATGLIKAPVFALAIALVGCHSGLGVSGSAESVGRQTTRAVVESIFLVI 376

Query: 359 IIDSLFAIFYFAIGI 373
           I++++FAI +  IGI
Sbjct: 377 ILNAIFAIAFAKIGI 391


>gi|148555653|ref|YP_001263235.1| hypothetical protein Swit_2742 [Sphingomonas wittichii RW1]
 gi|148500843|gb|ABQ69097.1| protein of unknown function DUF140 [Sphingomonas wittichii RW1]
          Length = 365

 Score =  198 bits (504), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/340 (35%), Positives = 192/340 (56%), Gaps = 27/340 (7%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
           +DL  +  IDT+GA L+     ++   +++ G    + QL   I+    K +K +     
Sbjct: 42  IDLGEVDRIDTVGAWLVHRIAREH--DVEIVGADADVCQLIEQIAEAD-KPLKIRPDSSP 98

Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQA-HILGLVISNTGEFCASSYKFKGFLL------ 154
            F+            ++++ I D+ S A H L  +I   G F A+     G +       
Sbjct: 99  PFF------------RVLREIGDATSAAAHSLAGLI---GFFGATLIGLWGLVTHPRRFR 143

Query: 155 --SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
             ++ RQ   VGV  + ++ L+SF+ G VIAQQGA QL QFGAE+F+++L+  + LRE+G
Sbjct: 144 YNAMARQFEVVGVKALAIIGLMSFLIGIVIAQQGAVQLRQFGAEVFAVNLIGRITLRELG 203

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
           VL+TA+M+AGRSGSA  A++GSMK+ EE+DA+RT+G+  +  LI PR+ + ++ +PLL  
Sbjct: 204 VLMTAIMVAGRSGSAFAAQLGSMKLAEEVDAMRTIGVSPMEALILPRVLSTVVLMPLLGF 263

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
            A   AIIG  I  W   DIP   +  R      + +++ GLIKAP     I +    +G
Sbjct: 264 YAAVIAIIGGGIFCWIDLDIPPITYVQRIREVVPMTDLWVGLIKAPVFGMLIALCGCYQG 323

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
             V  ++  +G + T  VVQ+I +VI++D++FA+F+ +IG
Sbjct: 324 MQVEGNAEEVGLRTTASVVQAIFLVIVLDAVFAVFFSSIG 363


>gi|46579026|ref|YP_009834.1| STAS domain-containing protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46448439|gb|AAS95093.1| STAS domain protein [Desulfovibrio vulgaris str. Hildenborough]
          Length = 406

 Score =  198 bits (504), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/367 (32%), Positives = 198/367 (53%), Gaps = 8/367 (2%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           + RF+G W     +  A   +  +    +      DL+ +  +DT GA +I  F      
Sbjct: 47  ILRFSGAWDVATAAR-ARGQLQHLAIPAECGDLTFDLTGVLRLDTAGALVITTF----RT 101

Query: 68  KIKLQGVSTHIEQLFSLISFTHR-KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
            ++ QG++  +    +  +   R   I   +       ++       IG  IV+    + 
Sbjct: 102 ALEKQGIAPLLHCAPAHNALIDRVAAIDMSEAPTVRHASALARTLNAIGASIVEETEQAV 161

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
                +G+++ +        ++F+   +SL   M   GV  VP+V L+SF+ G V A  G
Sbjct: 162 GILAFMGMLVISLVGLVLRPWRFR--WVSLCSHMEQTGVQAVPIVALLSFLIGLVTAYMG 219

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A Q ++FGA++F I+L+ I  LRE+GVLLTA+++AGRSGS+  A+IG+M  NEE+ A+R 
Sbjct: 220 AEQFARFGAQVFVINLLEISTLREMGVLLTALVVAGRSGSSFTAQIGAMVANEEVSAMRA 279

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +GLD + +L+ PR+ AL++ LP+L  +A+   I+G  +  W    I  A F +RFH    
Sbjct: 280 LGLDPIEVLVVPRVLALVVMLPILAFIADIMGILGGGVAAWGTLGIDPANFTARFHEIVH 339

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L N   G+IKAPF A  I +V   +GF V   + S+G+  T  VV++I +VI++++LFAI
Sbjct: 340 LRNFVVGMIKAPFFALVIALVGCFQGFRVTGSAESVGRLTTQAVVEAIFMVIVLNALFAI 399

Query: 367 FYFAIGI 373
            + ++G+
Sbjct: 400 LFTSLGV 406


>gi|77456265|ref|YP_345770.1| hypothetical protein Pfl01_0037 [Pseudomonas fluorescens Pf0-1]
 gi|77380268|gb|ABA71781.1| putative ABC transport system, permease [Pseudomonas fluorescens
           Pf0-1]
          Length = 382

 Score =  198 bits (503), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/369 (33%), Positives = 199/369 (53%), Gaps = 13/369 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R  G+W     +E+   +   +N    +++ I DL+ +  +DT GA L++  +    G 
Sbjct: 21  LRVTGDWTLAHYAEL-KQLSETLNGQYDANTPI-DLNGLGALDTAGASLLVELL----GS 74

Query: 69  IKLQGVSTHIEQLFS-----LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
            +L   + H +   S     L+   +R       P +    +    L   IG+ +     
Sbjct: 75  ERLGKSAEHPDCTISSADRALLQTVYRSLTDFCVPIKEPEISVSVQLLTRIGRAVDTVWQ 134

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
           D+      +GL++           +++  +  +I  +   G+   P+V L++F+ GAV+A
Sbjct: 135 DTLQLLGFVGLILETIARSLFRPKRWR--ITPMIAHIEQTGLDAAPIVALLTFLVGAVVA 192

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
             GA  L+ FGA +F++DL+    LRE GVLLTA+++AGR+ SA  A+IGSMK NEEIDA
Sbjct: 193 FLGATVLASFGASVFTVDLVGFAFLREFGVLLTAILMAGRTASAFTAQIGSMKANEEIDA 252

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           IRT+GLD + +L+ PR+ AL+++LP+LT LA    I+G ++V     DI  A+F S   S
Sbjct: 253 IRTLGLDPMELLVVPRVLALLVALPMLTFLAMICGIVGGAVVCAVSLDISPAMFLSLLQS 312

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              + +   GL+KAP  A  I  +   EGF V   + S+G   T+ VVQSI +VI++D++
Sbjct: 313 DIGIQHFLVGLVKAPIFAFLIAAIGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVLDAV 372

Query: 364 FAIFYFAIG 372
            A+F+  +G
Sbjct: 373 AALFFMEMG 381


>gi|229587675|ref|YP_002869794.1| putative ABC transporter permease [Pseudomonas fluorescens SBW25]
 gi|229359541|emb|CAY46382.1| putative ABC transport system, permease [Pseudomonas fluorescens
           SBW25]
          Length = 382

 Score =  198 bits (503), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/370 (33%), Positives = 202/370 (54%), Gaps = 15/370 (4%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDS-AIVDLSAITEIDTIGAELIMYFMEKYHG 67
            R  G+W    ++  A    ++     Q D+ A +DL+ +  +DT GA L++  +    G
Sbjct: 21  LRITGDWT---LAHYASLKKLSDKLDGQYDAGARIDLNGLGALDTAGASLLVELL----G 73

Query: 68  KIKLQGVSTHIEQLFS-----LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
             +++  +   +   S     L+   +R       P+++    +   +   IG+ +    
Sbjct: 74  PTRIEQSAEQTDCSLSAADRALLKTVYRSLNDFCVPEKAPEEAAGIQVLARIGRAVDTVW 133

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
            DS      +GL++           +++  L  ++  +  VG+   P+V L++F+ GAV+
Sbjct: 134 QDSKQLLGFIGLILETFARGIFRPRRWR--LTPMVAHLEQVGLDAAPIVALLTFLVGAVV 191

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A  GA  L  FGA IF++DL++   LRE GVLLTA++IAGR+ SA  A+IGSMK NEEID
Sbjct: 192 AFLGATVLKSFGATIFTVDLVAFSFLREFGVLLTAILIAGRTASAFTAQIGSMKANEEID 251

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           AIRT+GLD + +L+ PR+ AL+++LP+LT LA  S I+G  +V     DI  A+F S   
Sbjct: 252 AIRTLGLDPMELLVLPRVLALLVALPMLTFLAMLSGIVGGGVVCAVALDISPAMFLSLLQ 311

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           S   + +   GL+KAP  A  I  +   EGF V   + S+G   T+ VVQSI +VI++D+
Sbjct: 312 SDIGVQHFLVGLVKAPIFAFLIAAIGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVLDA 371

Query: 363 LFAIFYFAIG 372
           + A+F+  +G
Sbjct: 372 VAALFFMEMG 381


>gi|120603385|ref|YP_967785.1| hypothetical protein Dvul_2342 [Desulfovibrio vulgaris DP4]
 gi|120563614|gb|ABM29358.1| protein of unknown function DUF140 [Desulfovibrio vulgaris DP4]
          Length = 406

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/367 (32%), Positives = 197/367 (53%), Gaps = 8/367 (2%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           + RF+G W     +  A   +  +    +      DL+ +  +DT GA +I  F      
Sbjct: 47  ILRFSGAWDVATAAR-ARGQLQHLAIPAECGDLTFDLTGVLRLDTAGALVITTF----RT 101

Query: 68  KIKLQGVSTHIEQLFSLISFTHR-KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
            ++ QG++  +    +  +   R   I   +       ++       IG  IV+    + 
Sbjct: 102 ALEKQGIAPLLHCAPAHNALIDRVAAIDMSEAPTVRHASALARTLNAIGASIVEETEQAV 161

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
                +G+ + +        ++F+   +SL   M   GV  VP+V L+SF+ G V A  G
Sbjct: 162 GILAFMGMFVISLVGLVLRPWRFR--WVSLCSHMEQTGVQAVPIVALLSFLIGLVTAYMG 219

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A Q ++FGA++F I+L+ I  LRE+GVLLTA+++AGRSGS+  A+IG+M  NEE+ A+R 
Sbjct: 220 AEQFARFGAQVFVINLLEISTLREMGVLLTALVVAGRSGSSFTAQIGAMVANEEVSAMRA 279

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +GLD + +L+ PR+ AL++ LP+L  +A+   I+G  +  W    I  A F +RFH    
Sbjct: 280 LGLDPIEVLVVPRVLALVVMLPILAFIADIMGILGGGVAAWGTLGIDPANFTARFHEIVQ 339

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L N   G+IKAPF A  I +V   +GF V   + S+G+  T  VV++I +VI++++LFAI
Sbjct: 340 LRNFVVGMIKAPFFALVIALVGCFQGFRVTGSAESVGRLTTQAVVEAIFMVIVLNALFAI 399

Query: 367 FYFAIGI 373
            + ++G+
Sbjct: 400 LFTSLGV 406


>gi|217969575|ref|YP_002354809.1| hypothetical protein Tmz1t_1154 [Thauera sp. MZ1T]
 gi|217506902|gb|ACK53913.1| protein of unknown function DUF140 [Thauera sp. MZ1T]
          Length = 385

 Score =  197 bits (500), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/378 (31%), Positives = 210/378 (55%), Gaps = 15/378 (3%)

Query: 1   MSENGIT-VFRFAGNWK---SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAE 56
           ++ +G+  V R  G+W       +   AD +   I+ + +     V+L+ +  +DT GA 
Sbjct: 16  LAGDGVAAVLRLRGDWTLAHHAALRRQADALRGRIDAATR-----VELAELGTLDTAGAR 70

Query: 57  LIMYFM--EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI 114
           L+   +  E+    +  +G  +  E+   L +     + + ++P     Y +  ++  HI
Sbjct: 71  LLHGLLGGERVAALLADEGALSR-ERRALLKAVADAIEGREERPAADEGY-ALGDVLAHI 128

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
           G  ++ F     +    +GL++           +++  + +L+  +   G+  VP++ L+
Sbjct: 129 GHTMLVFWRHVSALTGFIGLILETALRVSVQPRRWR--VTALVANLERTGLDAVPIIALL 186

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           +F+ GAV+A  GA  L  FGA IF++DL++   LRE GVLLTA+++AGR+ S+  A+IGS
Sbjct: 187 TFLVGAVVAFLGATVLQNFGASIFTVDLVAYSFLREFGVLLTAIIVAGRTASSFTAQIGS 246

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           M+ NEEIDAIR +GLD V +L+ PR++AL+++LP+LT +A  + I+G  +V     DI  
Sbjct: 247 MRANEEIDAIRVLGLDPVELLVLPRVYALLVALPILTFVAMIAGIVGGMLVSAMTLDISP 306

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            +F SR      L + + G+ KAP  A  I ++   EGF V   + S+G+  T+ VVQSI
Sbjct: 307 VLFLSRIEDNVGLIHFWVGMAKAPIFAFLIAVIGCLEGFRVQGSAQSVGEHTTSAVVQSI 366

Query: 355 SIVIIIDSLFAIFYFAIG 372
            +VI++D++ A+F   +G
Sbjct: 367 FVVIVVDAIAALFCMEMG 384


>gi|188993114|ref|YP_001905124.1| ABC transporter permease [Xanthomonas campestris pv. campestris
           str. B100]
 gi|167734874|emb|CAP53086.1| ABC transporter permease [Xanthomonas campestris pv. campestris]
          Length = 370

 Score =  196 bits (499), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 122/367 (33%), Positives = 202/367 (55%), Gaps = 21/367 (5%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           R AG+W        A+ ++ A+   ++     +D   I ++D+ G   ++ F  +    +
Sbjct: 20  RLAGSWVLATALPQAE-LLQAVPDGVRR----IDARGIGQLDSAGVLQLLRFASRM--GL 72

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFY----NSFKNLHYHIGKKIVKFINDS 125
           K   +    E   +L+        +  KP+R + +    +      + +G+ I++  +  
Sbjct: 73  KEDAIDFRDEHQ-ALVCTIEELNDERPKPKRDYGFVAALDRLGRTTHGVGQGILELNS-- 129

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                 LG  +   G       +F+  L S +  M  VG+  VP+V+L+S++ GAVIA  
Sbjct: 130 -----FLGENLVKIGRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFL 182

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           G+  L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAIR
Sbjct: 183 GSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIR 242

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           T+GLD + +L+ PR+ ALI +LPLLT +A  + + G   V     DIP  ++ +R H T 
Sbjct: 243 TLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDTI 302

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            L +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ A
Sbjct: 303 QLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAA 362

Query: 366 IFYFAIG 372
           +++  +G
Sbjct: 363 LWFMKMG 369


>gi|146305413|ref|YP_001185878.1| hypothetical protein Pmen_0373 [Pseudomonas mendocina ymp]
 gi|145573614|gb|ABP83146.1| protein of unknown function DUF140 [Pseudomonas mendocina ymp]
          Length = 379

 Score =  196 bits (497), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/359 (33%), Positives = 199/359 (55%), Gaps = 9/359 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S +  +  R  G+W     S + +  V+A+ + +    + VDL  +  +DT GA L++  
Sbjct: 13  STDAASGLRIGGDWTLAHYSRL-EPQVLALRERLHGQES-VDLDELAALDTAGAALLVEL 70

Query: 62  M--EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
           +  E+     +   +ST    L   ++        +Q+ Q+    ++ + +  HIG+ + 
Sbjct: 71  LGSERLRQLAQQDNLSTERRALLLAVA---DAMAGSQQVQQHATPSALREVLGHIGEAVE 127

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                       +GL +S          +++  L SL   +   G++ VP+V L++F+ G
Sbjct: 128 TTWCHGRELLGFMGLTLSGMLTILLRPARWR--LTSLAAHLEQCGLNAVPIVALLTFLVG 185

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           AV+A  GA  L+ FGA I++++L++   LRE GVLLTA+++AGR+ SA  A+IGSMK NE
Sbjct: 186 AVVAFLGATILADFGASIYTVNLVAFSFLREFGVLLTAILMAGRTASAFTAQIGSMKANE 245

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDAIRT+GL  + +L+ PR++A++I+LP+LT +A  S I+G ++V     DIP  ++ S
Sbjct: 246 EIDAIRTLGLSPIELLVLPRVFAMLIALPILTFIAMLSGIVGGAVVCAVSLDIPLTMYMS 305

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
               +  L +   GL+KAP  A  I ++   EGF V   + S+G+  T+ VVQSI +VI
Sbjct: 306 ILQDSDLLRHFLVGLLKAPIFAFLIALIGCLEGFKVSGSAQSVGEHTTSAVVQSIFVVI 364


>gi|325923308|ref|ZP_08184981.1| conserved hypothetical integral membrane protein [Xanthomonas
           gardneri ATCC 19865]
 gi|325546235|gb|EGD17416.1| conserved hypothetical integral membrane protein [Xanthomonas
           gardneri ATCC 19865]
          Length = 370

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/367 (33%), Positives = 201/367 (54%), Gaps = 21/367 (5%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           R AG+W        A+ ++ A+   I+     +D   I ++D+ G   ++ F  +    +
Sbjct: 20  RLAGSWVLATALPQAE-LLQAVPDGIRR----IDARGIAQLDSAGVLQLLRFASRM--GL 72

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFY----NSFKNLHYHIGKKIVKFINDS 125
           K   +    E   +L+        +  KP+R + +    +      + +G+ I++  +  
Sbjct: 73  KEDAIDFRDEHQ-ALVCTIEELNDERPKPKRDYGFVAALDRLGRTTHGVGQGILELNS-- 129

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                 LG  +           +F+  L S +  M  VG+  VP+V+L+S++ GAVIA  
Sbjct: 130 -----FLGENLVKIARLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFL 182

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           G+  L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAIR
Sbjct: 183 GSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIR 242

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           T+GLD + +L+ PR+ ALI +LPLLT +A  + + G   V     DIP  ++ +R H T 
Sbjct: 243 TLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDTI 302

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            L +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ A
Sbjct: 303 QLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAA 362

Query: 366 IFYFAIG 372
           +++  +G
Sbjct: 363 LWFMKMG 369


>gi|103485974|ref|YP_615535.1| hypothetical protein Sala_0481 [Sphingopyxis alaskensis RB2256]
 gi|98976051|gb|ABF52202.1| protein of unknown function DUF140 [Sphingopyxis alaskensis RB2256]
          Length = 368

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/333 (33%), Positives = 188/333 (56%), Gaps = 9/333 (2%)

Query: 40  AIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
           A +DLSAI  IDT+GA ++      +  +I   G S   ++L   ++ + + + +  + +
Sbjct: 43  ATLDLSAIDRIDTVGAWIVTRTAADHDARIT--GASADAQRLLDALA-SDKSEYRVHRDR 99

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
           R     ++  +   IG   V   N+        G +I        +  + +    +++ +
Sbjct: 100 RP----AWVRMLEQIGTASVAVWNELLGIVGFFGAMIVAIFNQIRARRRLR--WNAIVTR 153

Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219
              VGV  +P++ L+SF+ G VIAQQGA QL QFG E+F+I+L+    +RE+G+L+TA+M
Sbjct: 154 FQTVGVDALPIIGLMSFLIGIVIAQQGAVQLEQFGLEVFTINLVGRASIRELGLLMTAIM 213

Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279
           +AGRSGSA  A+IG+MK+ EE+DA+RT+G+  +  ++ PR+ A  I++PLL   A+  AI
Sbjct: 214 VAGRSGSAFAAQIGTMKLTEEVDAMRTIGVSPMEAIVLPRVAASTITMPLLGFYASLCAI 273

Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339
            G  +  W   DIP   +  R      + + +  LIKAP     IG+    EG  V  ++
Sbjct: 274 AGGGLFCWVGLDIPPLTYIQRLREIIPMTDFWIMLIKAPVFGILIGVTGCYEGMQVRQNA 333

Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
             +G++ T+ VV +I +VI++D+ FA+F+ ++G
Sbjct: 334 EEVGQRTTSAVVAAIFLVIVLDAFFAVFFSSLG 366


>gi|166713439|ref|ZP_02244646.1| ABC transporter permease [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 370

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 199/368 (54%), Gaps = 21/368 (5%)

Query: 9   FRFAGNW----KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
            R AG+W      P+ +E+   V   + +        +D   I ++D+ G   ++ F  +
Sbjct: 19  LRLAGSWVLATALPQ-AELLQTVPDGVRR--------IDARGIQQLDSAGVLQLLRFASR 69

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
               +K   +    E   +L+        +  KP+R + + +  +    +G+   +   D
Sbjct: 70  M--GLKEDAIDFRDEHQ-ALVCTIEELNDERPKPKRDYGFVAALD---RLGRATHRIGQD 123

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG  +           +F+  L S +  M  VG+  VP+V+L+S++ GAVIA 
Sbjct: 124 ILELNSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAF 181

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            G+  L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAI
Sbjct: 182 LGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAI 241

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           RT+GLD + +L+ PR+ ALI +LPLLT +A  + + G   V     DIP  ++ +R H T
Sbjct: 242 RTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHET 301

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ 
Sbjct: 302 IQLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIA 361

Query: 365 AIFYFAIG 372
           A+++  +G
Sbjct: 362 ALWFMKMG 369


>gi|21244295|ref|NP_643877.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21109945|gb|AAM38413.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 370

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/364 (32%), Positives = 203/364 (55%), Gaps = 15/364 (4%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           R AG+W        A+ ++ A+   ++     +D   I ++D+ G   ++    ++ G++
Sbjct: 20  RLAGSWVLATALPQAE-LLQAVPDGVRR----IDARGIQQLDSAGVLQLL----RFAGRM 70

Query: 70  KLQGVSTHI-EQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
            L+  +    ++  +L+        +  KP+R + + +  +    +G+   +   D    
Sbjct: 71  GLKEDAIDFRDEHQALVCTIEELNDERPKPKRDYGFVAALD---RLGRATHRVGQDILEL 127

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG  +           +F+  L S +  M  VG+  VP+V+L+S++ GAVIA  G+ 
Sbjct: 128 NSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFLGST 185

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAIRT+G
Sbjct: 186 ILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIRTLG 245

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD + +L+ PR+ ALI +LPLLT +A  + + G   V     DIP  ++ +R H T  L 
Sbjct: 246 LDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDTIQLR 305

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ A+++
Sbjct: 306 HFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWF 365

Query: 369 FAIG 372
             +G
Sbjct: 366 MKMG 369


>gi|294624127|ref|ZP_06702865.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|294663966|ref|ZP_06729386.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292601572|gb|EFF45571.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292606261|gb|EFF49492.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 370

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/364 (32%), Positives = 204/364 (56%), Gaps = 15/364 (4%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           R AG+W        A+ ++ A+ + ++     +D   I ++D+ G   ++    ++ G++
Sbjct: 20  RLAGSWVLATALPQAE-LLQAVPEGVRR----IDARGIQQLDSAGVLQLL----RFAGRM 70

Query: 70  KLQGVSTHI-EQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
            L+  +    ++  +L+        +  KP+R + + +  +    +G+   +   D    
Sbjct: 71  GLKEDAIDFRDEHQALVCTIEELNDERPKPKRDYGFVAALD---RLGRATHRVGQDILEL 127

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG  +           +F+  L S +  M  VG+  VP+V+L+S++ GAVIA  G+ 
Sbjct: 128 NSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFLGST 185

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAIRT+G
Sbjct: 186 ILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIRTLG 245

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD + +L+ PR+ AL+ +LPLLT +A  + + G   V     DIP  ++ +R H T  L 
Sbjct: 246 LDPIDLLVIPRLLALVFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDTIQLR 305

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ A+++
Sbjct: 306 HFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWF 365

Query: 369 FAIG 372
             +G
Sbjct: 366 MKMG 369


>gi|325928564|ref|ZP_08189752.1| putative integral membrane protein [Xanthomonas perforans 91-118]
 gi|325541103|gb|EGD12657.1| putative integral membrane protein [Xanthomonas perforans 91-118]
          Length = 370

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/364 (32%), Positives = 203/364 (55%), Gaps = 15/364 (4%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           R AG+W        A+ ++ A+   ++     +D   I ++D+ G   ++    ++ G++
Sbjct: 20  RLAGSWVLATALPQAE-LLQAVPDGVRR----IDARGIQQLDSAGVLQLL----RFAGRM 70

Query: 70  KLQGVSTHI-EQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
            L+  +    ++  +L+        +  KP+R + + +  +    +G+   +   D    
Sbjct: 71  GLKEDAIDFRDEHQALVCTIEELNDERPKPKRDYGFVAALD---RLGRATHRVGQDILEL 127

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG  +           +F+  L S +  M  VG+  VP+V+L+S++ GAVIA  G+ 
Sbjct: 128 NSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFLGST 185

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAIRT+G
Sbjct: 186 ILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIRTLG 245

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD + +L+ PR+ ALI +LPLLT +A  + + G   V     DIP  ++ +R H T  L 
Sbjct: 246 LDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHETIQLR 305

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ A+++
Sbjct: 306 HFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWF 365

Query: 369 FAIG 372
             +G
Sbjct: 366 MKMG 369


>gi|84622391|ref|YP_449763.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188578633|ref|YP_001915562.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|84366331|dbj|BAE67489.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188523085|gb|ACD61030.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 370

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 199/368 (54%), Gaps = 21/368 (5%)

Query: 9   FRFAGNW----KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
            R AG+W      P+ +E+   V   + +        +D   I ++D+ G   ++ F  +
Sbjct: 19  LRLAGSWVLATALPQ-AELLQTVPDGVRR--------IDARGIQQLDSAGVLQLLRFASR 69

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
               +K   +    E   +L+        +  KP+R + + +  +    +G+   +   D
Sbjct: 70  I--GLKEDAIDFRDEHQ-ALVCTIEELNDERPKPKRDYGFVAALD---RLGRATHRIGQD 123

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG  +           +F+  L S +  M  VG+  VP+V+L+S++ GAVIA 
Sbjct: 124 ILELNSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAF 181

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            G+  L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAI
Sbjct: 182 LGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAI 241

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           RT+GLD + +L+ PR+ ALI +LPLLT +A  + + G   V     DIP  ++ +R H T
Sbjct: 242 RTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHET 301

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ 
Sbjct: 302 IQLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIA 361

Query: 365 AIFYFAIG 372
           A+++  +G
Sbjct: 362 ALWFMKMG 369


>gi|58580429|ref|YP_199445.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|58425023|gb|AAW74060.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 398

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 199/368 (54%), Gaps = 21/368 (5%)

Query: 9   FRFAGNW----KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
            R AG+W      P+ +E+   V   + +        +D   I ++D+ G   ++ F  +
Sbjct: 47  LRLAGSWVLATALPQ-AELLQTVPDGVRR--------IDARGIQQLDSAGVLQLLRFASR 97

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
               +K   +    E   +L+        +  KP+R + + +  +    +G+   +   D
Sbjct: 98  I--GLKEDAIDFRDEHQ-ALVCTIEELNDERPKPKRDYGFVAALD---RLGRATHRIGQD 151

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG  +           +F+  L S +  M  VG+  VP+V+L+S++ GAVIA 
Sbjct: 152 ILELNSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAF 209

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            G+  L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAI
Sbjct: 210 LGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAI 269

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           RT+GLD + +L+ PR+ ALI +LPLLT +A  + + G   V     DIP  ++ +R H T
Sbjct: 270 RTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHET 329

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ 
Sbjct: 330 IQLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIA 389

Query: 365 AIFYFAIG 372
           A+++  +G
Sbjct: 390 ALWFMKMG 397


>gi|289662615|ref|ZP_06484196.1| ABC transporter permease [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289668440|ref|ZP_06489515.1| ABC transporter permease [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 370

 Score =  194 bits (494), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 199/368 (54%), Gaps = 21/368 (5%)

Query: 9   FRFAGNW----KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
            R AG+W      P+ +E+   V   + +        +D   I ++D+ G   ++ F  +
Sbjct: 19  LRLAGSWVLATALPQ-AELLQTVPDGVRR--------IDARGIQQLDSAGVLQLLRFASR 69

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
               +K   +    E   +L+        +  KP+R + + +  +    +G+   +   D
Sbjct: 70  M--GLKEDAIDFRDEHQ-ALVCTIEELNDERPKPKRDYGFVAALD---RLGRATHRVGQD 123

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG  +           +F+  L S +  M  VG+  VP+V+L+S++ GAVIA 
Sbjct: 124 ILELNSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAF 181

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            G+  L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAI
Sbjct: 182 LGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAI 241

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           RT+GLD + +L+ PR+ ALI +LPLLT +A  + + G   V     DIP  ++ +R H T
Sbjct: 242 RTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDT 301

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ 
Sbjct: 302 IQLRHFLVGLSKAPLFALVIGLIGCLEGLKVTGTAQSVGERTTSSVVQTISLVIILDAIA 361

Query: 365 AIFYFAIG 372
           A+++  +G
Sbjct: 362 ALWFMKMG 369


>gi|330806719|ref|YP_004351181.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327374827|gb|AEA66177.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 382

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/342 (34%), Positives = 186/342 (54%), Gaps = 19/342 (5%)

Query: 37  SDSAIVDLSAITEIDTIGAELIMYFM-------EKYHGKIKLQGVSTHIEQLF--SLISF 87
            ++ ++DL+ +  +DT GA L++  +          H    L      + Q    SL  F
Sbjct: 47  DENTLIDLNGLGALDTAGASLLVELLGSERLGKTTEHPDCSLPAAERALLQTVYCSLTDF 106

Query: 88  THRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSY 147
                +  ++PQ          L   IG+ + K   D+      +GL++           
Sbjct: 107 C----VPVKEPQ----VGVLTQLLTRIGRAVEKVWQDTLQLLGFVGLILETLARNLLRPR 158

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           +++  +  ++  +   G+   P+V L++F+ GAV+A  GA  L+ FGA IF++DL++   
Sbjct: 159 RWR--MTPMVVHIEQTGLDAAPIVALLTFLVGAVVAFLGATVLADFGASIFTVDLVAFSF 216

Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267
           LRE GVLLTA+++AGR+ SA  A+IGSMK NEEIDAIRT+GLD V +L+ PR+ AL+++L
Sbjct: 217 LREFGVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRTLGLDPVELLVIPRVLALLVAL 276

Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327
           P+LT LA  S IIG  +V      I  A+F +   S   + +   G++KAP  A  I  V
Sbjct: 277 PMLTFLAMLSGIIGGGVVCALSLGISPAMFLTLLQSDIGVQHFLVGMVKAPIFAFLIAAV 336

Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              EGF V   + S+G   T+ VVQSI +VI++D++ A+F+ 
Sbjct: 337 GCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVLDAVAALFFM 378


>gi|114764121|ref|ZP_01443360.1| ABC transporter, inner membrane subunit [Pelagibaca bermudensis
           HTCC2601]
 gi|114543479|gb|EAU46494.1| ABC transporter, inner membrane subunit [Roseovarius sp. HTCC2601]
          Length = 377

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/338 (35%), Positives = 193/338 (57%), Gaps = 10/338 (2%)

Query: 39  SAIVDLSAITEIDTIGAELIMYFMEKYH---GKIKLQGVSTHIEQLFSLISFTHRKKIKN 95
           S +VDL+ +  IDT GA L++    +     G   L+ VS     L   +     ++ + 
Sbjct: 47  SLVVDLAGVERIDTAGAWLLVDLEARAQAAGGSFGLRNVSDTTALLLDNV-----RQARP 101

Query: 96  QKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLS 155
           ++  R       + L   IG+ +V  +         LGL ++  G       +F+  L +
Sbjct: 102 EREDRPAAARGIQALLEQIGRAVVGGLRYFADLTGFLGLFLARLGRVLRHPSQFR--LTA 159

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+     VG+  VP+V L+SF+ G V+A QG+ QL QFGAE+F +DL++I  LRE+G+LL
Sbjct: 160 LVAHCEDVGLRAVPIVALMSFLIGVVLAFQGSEQLRQFGAEVFVVDLIAISVLRELGILL 219

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA+++AGR+ SA  A IGSMK+ EEIDA+RT+GLD   +L  PRI AL++ LP+L ++A+
Sbjct: 220 TAIIVAGRTASAFTAAIGSMKMREEIDAMRTLGLDPGVMLFVPRILALLLMLPILGLIAD 279

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
           F  + G +++ W    I  ++F +R      + ++  GL+KAP  A  IG+V    G  V
Sbjct: 280 FMGLFGGALMAWLELGISPSMFVTRLIEGTGVGHLLVGLVKAPAFALIIGVVGCHAGMQV 339

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
             ++ SLG+  +  VV +I  VI+ D+LF++F+  +GI
Sbjct: 340 KGNAESLGRMTSGAVVAAIFAVILADALFSVFFAKVGI 377


>gi|21230110|ref|NP_636027.1| ABC transporter permease [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66769899|ref|YP_244661.1| ABC transporter permease [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21111638|gb|AAM39951.1| ABC transporter permease [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66575231|gb|AAY50641.1| ABC transporter permease [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 370

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/367 (32%), Positives = 201/367 (54%), Gaps = 21/367 (5%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           R AG+W        A+ ++ A+   ++     +D   I ++D+ G   ++ F  +    +
Sbjct: 20  RLAGSWVLATALPQAE-LLQAVPDGVRR----IDARGIGQLDSAGVLQLLRFASRM--GL 72

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFY----NSFKNLHYHIGKKIVKFINDS 125
           K   +    E   +L+        +  KP+R + +    +      + +G+ I++  +  
Sbjct: 73  KEDAIDFRDEHQ-ALVCTIEELNDERPKPKRDYGFVAALDRLGRTTHGVGQGILELNS-- 129

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                 LG  +           +F+  L S +  M  VG+  VP+V+L+S++ GAVIA  
Sbjct: 130 -----FLGENLVKIARLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFL 182

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           G+  L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAIR
Sbjct: 183 GSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIR 242

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           T+GLD + +L+ PR+ ALI +LPLLT +A  + + G   V     DIP  ++ +R H T 
Sbjct: 243 TLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDTI 302

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            L +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ A
Sbjct: 303 QLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAA 362

Query: 366 IFYFAIG 372
           +++  +G
Sbjct: 363 LWFMKMG 369


>gi|78049251|ref|YP_365426.1| ABC transporter permease [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78037681|emb|CAJ25426.1| ABC transporter permease [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 409

 Score =  193 bits (490), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 114/332 (34%), Positives = 190/332 (57%), Gaps = 10/332 (3%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHI-EQLFSLISFTHRKKIKNQKPQR 100
           +D   I ++D+ G   ++    ++ G++ L+  +    ++  +L+        +  KP+R
Sbjct: 86  IDARGIQQLDSAGVLQLL----RFAGRMGLKEDAIDFRDEHQALVCTIEELNDERPKPKR 141

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
            + + +  +    +G+   +   D       LG  +           +F+  L S +  M
Sbjct: 142 DYGFVAALD---RLGRATHRVGQDILELNSFLGENLVKIMRLIHEPRRFR--LTSTVHHM 196

Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
             VG+  VP+V+L+S++ GAVIA  G+  L  FGAEI+ ++L+SI  LRE  VLLTA+++
Sbjct: 197 EQVGLDAVPLVVLLSYLVGAVIAFLGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVL 256

Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280
           AGR+ SA  A+IG+MK  EE+DAIRT+GLD + +L+ PR+ ALI +LPLLT +A  + + 
Sbjct: 257 AGRTASAFTAQIGAMKSREEVDAIRTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLA 316

Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
           G   V     DIP  ++ +R H T  L +   GL KAP  A  IG++   EG  V   + 
Sbjct: 317 GGVTVGAFDLDIPPQMYLARMHETIQLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQ 376

Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           S+G++ T+ VVQ+IS+VII+D++ A+++  +G
Sbjct: 377 SVGERTTSSVVQTISLVIILDAIAALWFMKMG 408


>gi|146277759|ref|YP_001167918.1| hypothetical protein Rsph17025_1720 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145556000|gb|ABP70613.1| protein of unknown function DUF140 [Rhodobacter sphaeroides ATCC
           17025]
          Length = 366

 Score =  193 bits (490), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 107/335 (31%), Positives = 189/335 (56%), Gaps = 9/335 (2%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYHG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
           +D+ A+  +DT GA  I+   ++        ++  +S     L + ++      +   +P
Sbjct: 38  LDMGAVEALDTAGAWAILSAQKRAEAGGRPFEIVNLSEAHRHLLATVA----DAMPEPEP 93

Query: 99  QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158
           +R        +    +G+++   +  S       G V+++ G       + +  L  L+ 
Sbjct: 94  RRRTIPGRPGDGLAQLGQEVAGGLRGSLDSMAFFGQVVAHLGGLLIHPRRLR--LTPLVH 151

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
            M   G + VP+V L+ F+ G V+A QG+ QL  FGAE++ +DL++I  LRE+G+LLTA+
Sbjct: 152 HMQEAGWNAVPIVTLMGFLIGIVLAFQGSTQLKAFGAEVYVVDLVAISILRELGILLTAI 211

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++AGRSGSA  A IGSMK+ EEIDA+R +GLD +  L+ PR+ AL+I LP+L  +A+ + 
Sbjct: 212 IVAGRSGSAFTAAIGSMKMREEIDAMRVLGLDPIDRLVLPRLIALVILLPVLGFIASMAG 271

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           ++G +++ W    I   +F ++  +   + +   GL+KAPF A  I ++   +G  V  +
Sbjct: 272 LVGGALMAWIDLGITPGMFRTQLLADTDVNHAIIGLVKAPFFAVIIAVIGCHQGMQVSGN 331

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           + SLG   +  VVQ+I +VI++D+LF++F+   G+
Sbjct: 332 AESLGSHTSRSVVQAIFLVIVVDALFSVFFAVWGL 366


>gi|28198464|ref|NP_778778.1| ABC transporter permease [Xylella fastidiosa Temecula1]
 gi|28056548|gb|AAO28427.1| ABC transporter permease [Xylella fastidiosa Temecula1]
          Length = 372

 Score =  192 bits (489), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 125/350 (35%), Positives = 201/350 (57%), Gaps = 14/350 (4%)

Query: 24  ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFS 83
           A +++ + + SIQ     ++   I ++D+ GA  ++ F  +    +K + +    E+   
Sbjct: 35  ASELLQSYSNSIQH----INARNIDQLDSAGALQLLRFTTRT--GLKNEAIEFR-EEHRP 87

Query: 84  LISFTHRKKIKNQKPQRSF-FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEF 142
           LIS       ++ KP+R + F  + + L   +  K  + I D CS    LG  +    + 
Sbjct: 88  LISTIEILDDEHPKPERDYGFLAALERLGIAV-VKTRRNIIDVCS---FLGENLVKIAQL 143

Query: 143 CASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDL 202
                +F+  + S +  M  VG+  VP+V+++S++ GAVIA  G+  L  FGAEIF ++L
Sbjct: 144 AREPRRFR--ITSTVHHMEQVGLDAVPLVVVLSYLVGAVIAFLGSTILRNFGAEIFVVEL 201

Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
           ++I  LRE  VLLTA+++AGR+ SA  A+IG+MK  EEIDAI+T+GLD + +L+ PR+ A
Sbjct: 202 VNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEIDAIQTLGLDPIDLLVIPRLIA 261

Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322
           L++ LPLLT +A  + + G   V      IP  ++ SR H T  L +   G+ KAP  A 
Sbjct: 262 LLVMLPLLTFIAMIAGLAGGITVGAFDLGIPPQMYLSRMHETMQLRHFIIGMSKAPLFAL 321

Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
            IG++   EG  V   + S+GK  T+ VVQ+IS+VIIID+L A+++  +G
Sbjct: 322 IIGLIGCLEGLKVTGTAQSVGKHTTSSVVQTISLVIIIDALAALWFMRMG 371


>gi|126462257|ref|YP_001043371.1| hypothetical protein Rsph17029_1489 [Rhodobacter sphaeroides ATCC
           17029]
 gi|126103921|gb|ABN76599.1| protein of unknown function DUF140 [Rhodobacter sphaeroides ATCC
           17029]
          Length = 366

 Score =  192 bits (488), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 108/335 (32%), Positives = 190/335 (56%), Gaps = 9/335 (2%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
           +D++A+  +DT GA  I+   ++       +++  +S     L   ++    +  + ++ 
Sbjct: 38  IDMAAVEALDTAGAWAILQAQKRAEAAGQALEIVNLSESHRHLLETVAAAMPEPERRRRT 97

Query: 99  QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158
                 +   NL    G+++ + +  S +     G V+++ G       + K  L  L+ 
Sbjct: 98  IPGRPDDGLANL----GQEVAQGLRGSLTSVGFFGEVVAHLGALVLHPTRLK--LTPLVH 151

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
            M   G + VP+V L+ F+ G V+A QG+ QL  FGAE++ +DL++I  LRE+G+LLTA+
Sbjct: 152 HMQEAGWNAVPIVSLMGFLIGIVLAFQGSTQLKSFGAEVYVVDLVAISILRELGILLTAI 211

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++AGRS SA  A IGSMK+ EEIDA+R +GLD +  L+ PR+ AL+I LP L  +A+ + 
Sbjct: 212 IVAGRSASAFTAAIGSMKMREEIDAMRVLGLDPIDRLVLPRLIALVILLPALGFIASLAG 271

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           ++G  ++ W    I   +F ++  +   +++   GL+KAPF A  I ++   +G  V  +
Sbjct: 272 LVGGGLMAWIDLGITPGMFRTQLLADTDVSHAIIGLVKAPFFAVIIAVIGCHQGMQVSGN 331

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           + SLG   +  VVQ+I +VI++D+LF+IF+   G+
Sbjct: 332 AESLGSHTSRSVVQAIFLVIVVDALFSIFFAVWGL 366


>gi|182681137|ref|YP_001829297.1| hypothetical protein XfasM23_0579 [Xylella fastidiosa M23]
 gi|182631247|gb|ACB92023.1| protein of unknown function DUF140 [Xylella fastidiosa M23]
 gi|307579585|gb|ADN63554.1| ABC transporter permease [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 396

 Score =  192 bits (488), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 125/350 (35%), Positives = 201/350 (57%), Gaps = 14/350 (4%)

Query: 24  ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFS 83
           A +++ + + SIQ     ++   I ++D+ GA  ++ F  +    +K + +    E+   
Sbjct: 59  ASELLQSYSNSIQH----INARNIDQLDSAGALQLLRFTTRT--GLKNEAIEFR-EEHRP 111

Query: 84  LISFTHRKKIKNQKPQRSF-FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEF 142
           LIS       ++ KP+R + F  + + L   +  K  + I D CS    LG  +    + 
Sbjct: 112 LISTIEILDDEHPKPERDYGFLAALERLGIAV-VKTRRNIIDVCS---FLGENLVKIAQL 167

Query: 143 CASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDL 202
                +F+  + S +  M  VG+  VP+V+++S++ GAVIA  G+  L  FGAEIF ++L
Sbjct: 168 AREPRRFR--ITSTVHHMEQVGLDAVPLVVVLSYLVGAVIAFLGSTILRNFGAEIFVVEL 225

Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
           ++I  LRE  VLLTA+++AGR+ SA  A+IG+MK  EEIDAI+T+GLD + +L+ PR+ A
Sbjct: 226 VNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEIDAIQTLGLDPIDLLVIPRLIA 285

Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322
           L++ LPLLT +A  + + G   V      IP  ++ SR H T  L +   G+ KAP  A 
Sbjct: 286 LLVMLPLLTFIAMIAGLAGGITVGAFDLGIPPQMYLSRMHETMQLRHFIIGMSKAPLFAL 345

Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
            IG++   EG  V   + S+GK  T+ VVQ+IS+VIIID+L A+++  +G
Sbjct: 346 IIGLIGCLEGLKVTGTAQSVGKHTTSSVVQTISLVIIIDALAALWFMRMG 395


>gi|221639257|ref|YP_002525519.1| ABC transporter inner membrane subunit [Rhodobacter sphaeroides
           KD131]
 gi|221160038|gb|ACM01018.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides
           KD131]
          Length = 356

 Score =  192 bits (488), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 108/335 (32%), Positives = 190/335 (56%), Gaps = 9/335 (2%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
           +D++A+  +DT GA  I+   ++       +++  +S     L   ++    +  + ++ 
Sbjct: 28  IDMAAVEALDTAGAWAILQAQKRAEAAGQALEIVNLSESHRHLLETVAAAMPEPERRRRT 87

Query: 99  QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158
                 +   NL    G+++ + +  S +     G V+++ G       + K  L  L+ 
Sbjct: 88  IPGRPDDGLANL----GQEVAQGLRGSLTSVGFFGEVVAHLGALVLHPTRLK--LTPLVH 141

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
            M   G + VP+V L+ F+ G V+A QG+ QL  FGAE++ +DL++I  LRE+G+LLTA+
Sbjct: 142 HMQEAGWNAVPIVSLMGFLIGIVLAFQGSTQLKSFGAEVYVVDLVAISILRELGILLTAI 201

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++AGRS SA  A IGSMK+ EEIDA+R +GLD +  L+ PR+ AL+I LP L  +A+ + 
Sbjct: 202 IVAGRSASAFTAAIGSMKMREEIDAMRVLGLDPIDRLVLPRLIALVILLPALGFIASLAG 261

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           ++G  ++ W    I   +F ++  +   +++   GL+KAPF A  I ++   +G  V  +
Sbjct: 262 LVGGGLMAWIDLGITPGMFRTQLLADTDVSHAIIGLVKAPFFAVIIAVIGCHQGMQVSGN 321

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           + SLG   +  VVQ+I +VI++D+LF+IF+   G+
Sbjct: 322 AESLGSHTSRSVVQAIFLVIVVDALFSIFFAVWGL 356


>gi|114570554|ref|YP_757234.1| hypothetical protein Mmar10_2004 [Maricaulis maris MCS10]
 gi|114341016|gb|ABI66296.1| protein of unknown function DUF140 [Maricaulis maris MCS10]
          Length = 384

 Score =  192 bits (488), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 123/376 (32%), Positives = 195/376 (51%), Gaps = 13/376 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            E   T+    G+W    I    D+ + A+  S    S +VD+S +  +DT GA    Y 
Sbjct: 18  EEGERTILEPHGDWVIDTIGR-HDNAIRAVEASADPCSIVVDVSHLGRVDTAGA----YL 72

Query: 62  MEKYHGKIKLQGVSTH-IEQLFSLISFTHRKKIKNQ--KPQRSFFYNSFKNLHYHIGKKI 118
           + +   K        H + Q  ++       +++ Q   P     +   K L   +G  I
Sbjct: 73  LGRATRKCPTPDADFHFVGQHRTVRRLIEEVRMRTQVCGPDEVPTFGFIKAL-ARLGAGI 131

Query: 119 VKFINDSCSQAHILGLVISNTGEFC-ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
                ++       G  ++ TG  C    ++F+  L   +  M  VGV+ +P+V  ++F 
Sbjct: 132 EVAYQEAVDTFAFFGKTLT-TGLSCFIQPWRFR--LTPTVWAMEEVGVNALPIVATLTFF 188

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            GAV+A  GA  L  FGA +F++DL+ +  LRE GVL+TA+M+A RS SA  A IG+MK+
Sbjct: 189 IGAVVAYMGATLLQSFGASVFTVDLVGLAVLREFGVLITAIMLAARSDSAFTASIGAMKM 248

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            +EIDA+R +GLD    L+ PR+ A ++  PLLT  A  + I G  +V W   DI  A+F
Sbjct: 249 QQEIDAMRVLGLDPYEALVLPRVVACVLMAPLLTFGAMVAGIFGGMLVAWTAQDISPALF 308

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
           F+R HS   +++ + G+ KAP     + I+  ++G  V     SLG++VT  VVQSI  +
Sbjct: 309 FTRLHSEIDISHFWVGMSKAPVFGMVVAIIGCRQGMQVQGDVESLGRRVTASVVQSIFAI 368

Query: 358 IIIDSLFAIFYFAIGI 373
           I++++LFA+ Y  + I
Sbjct: 369 IVLEALFAMMYLELEI 384


>gi|330501346|ref|YP_004378215.1| hypothetical protein MDS_0432 [Pseudomonas mendocina NK-01]
 gi|328915632|gb|AEB56463.1| hypothetical protein MDS_0432 [Pseudomonas mendocina NK-01]
          Length = 381

 Score =  192 bits (487), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 120/367 (32%), Positives = 200/367 (54%), Gaps = 25/367 (6%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S +  +  R  G+W     S++ +  V+A+ + +    + VDL  +  +DT GA L+   
Sbjct: 15  STDAASGLRLGGDWTLAHYSQL-EPQVLALRERLHGKES-VDLGDLAALDTAGAALL--- 69

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKK---------IKNQKPQRSFFYNS-FKNLH 111
                  ++L G S  + QL        R++         +    P ++    S  + + 
Sbjct: 70  -------VELFG-SERLRQLIQQAELDERRRALLLTVADAMAGSAPAQAASEPSVLREVL 121

Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171
            HIG+ +    +   +    +GL +++         +++  L SL   +   G++ VP+V
Sbjct: 122 GHIGEVVEGMWHQGRALLGFMGLTLTSMLAILVRPMRWR--LTSLAAHLEQCGLNAVPIV 179

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
            L++F+ GAV+A  GA  L+ FGA I++++L++   LRE GVLLTA+++AGR+ SA  A+
Sbjct: 180 ALLTFLVGAVVAFLGATILADFGATIYTVNLVAFSFLREFGVLLTAILMAGRTASAFTAQ 239

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           IGSMK NEEIDAIRT+GL  + +L+ PR++A++I+LP+LT +A  S I+G  +V     D
Sbjct: 240 IGSMKANEEIDAIRTLGLSPIELLVLPRVFAMLIALPILTFIAMLSGIVGGGLVCAVSLD 299

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
           IP  ++ S    +  L +   GL+KAP  A  I ++   EGF V   + S+G+  T+ VV
Sbjct: 300 IPVTMYLSILQDSDLLRHFLVGLLKAPIFAFLIALIGCLEGFKVSGSAQSVGEHTTSAVV 359

Query: 352 QSISIVI 358
           QSI +VI
Sbjct: 360 QSIFVVI 366


>gi|254292866|ref|YP_003058889.1| hypothetical protein Hbal_0490 [Hirschia baltica ATCC 49814]
 gi|254041397|gb|ACT58192.1| protein of unknown function DUF140 [Hirschia baltica ATCC 49814]
          Length = 380

 Score =  192 bits (487), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 199/373 (53%), Gaps = 12/373 (3%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G  V    G W +  +  I   +    +K +  D ++ D+S + + DT GA ++   + +
Sbjct: 16  GDPVMVLEGAWTAFTVGAIDKPLRQLTSKDVSKDVSL-DVSQLEDFDTAGAYVVDRTLRQ 74

Query: 65  YHGK----IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
                    K+ G +  +  L + ++    + +K  K +     + F  L   +G   V 
Sbjct: 75  LGAPSGSLAKIVGDTHSVISLLTAVNAAKPEPVKKAKDR-----HGFTQLLDRVGHGTVD 129

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
            + +       +G   +       +  K +    S++  M   G++ +P+V ++SF  G 
Sbjct: 130 ALKEGWGILEFIGEAFTTVFFLLLNPKKIR--WTSVVAIMEEAGLNALPIVSMLSFFIGI 187

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           VIA  G   L  FGA++F+++++  L LRE G++LTA+++AGR+ S+  AEIG+MK+ EE
Sbjct: 188 VIAFLGVNLLQSFGAQVFTVEMVGFLMLREFGLVLTAILLAGRTDSSFTAEIGAMKMREE 247

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +DA+R MGL+ + +L++PR+ AL++  P L+  A  S ++G  +V+W   DI  A+F  R
Sbjct: 248 VDAMRVMGLNPMEVLVAPRLIALLVMTPFLSFFAMISGLVGGLLVMWGVMDISPAMFIQR 307

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
              T    N + G++KAP  A  I +V  ++G  V     SLG++ T+ VVQ+I +VI+I
Sbjct: 308 IQDTVPGQNFWVGIVKAPVFATVIALVGCRQGLLVSGDVQSLGQRTTSSVVQAIFLVIVI 367

Query: 361 DSLFAIFYFAIGI 373
           D++FAI Y  +G+
Sbjct: 368 DAIFAILYMEMGL 380


>gi|77463402|ref|YP_352906.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides
           2.4.1]
 gi|77387820|gb|ABA79005.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides
           2.4.1]
          Length = 366

 Score =  192 bits (487), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 107/335 (31%), Positives = 190/335 (56%), Gaps = 9/335 (2%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
           +D++A+  +DT GA  ++   ++       +++  +S     L   ++    +  + ++ 
Sbjct: 38  IDMAAVEALDTAGAWALLQAQKRAEAAGQALEIVNLSESHRHLLETVAAAMPEPERRRRT 97

Query: 99  QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158
                 +   NL    G+++ + +  S +     G V+++ G       + K  L  L+ 
Sbjct: 98  IPGRPDDGLANL----GQEVAQGLRGSLTSVGFFGEVVTHLGALVLHPTRLK--LTPLVH 151

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
            M   G + VP+V L+ F+ G V+A QG+ QL  FGAE++ +DL++I  LRE+G+LLTA+
Sbjct: 152 HMQEAGWNAVPIVSLMGFLIGIVLAFQGSTQLKSFGAEVYVVDLVAISILRELGILLTAI 211

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++AGRS SA  A IGSMK+ EEIDA+R +GLD +  L+ PR+ AL+I LP L  +A+ + 
Sbjct: 212 IVAGRSASAFTAAIGSMKMREEIDAMRVLGLDPIDRLVLPRLIALVILLPALGFIASLAG 271

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           ++G  ++ W    I   +F ++  +   +++   GL+KAPF A  I ++   +G  V  +
Sbjct: 272 LVGGGLMAWIDLGITPGMFRTQLLADTDVSHAIIGLVKAPFFAVIIAVIGCHQGMQVSGN 331

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           + SLG   +  VVQ+I +VI++D+LF+IF+   G+
Sbjct: 332 AESLGSHTSRSVVQAIFLVIVVDALFSIFFAVWGL 366


>gi|325915744|ref|ZP_08178046.1| hypothetical integral membrane protein [Xanthomonas vesicatoria
           ATCC 35937]
 gi|325538008|gb|EGD09702.1| hypothetical integral membrane protein [Xanthomonas vesicatoria
           ATCC 35937]
          Length = 370

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/368 (32%), Positives = 205/368 (55%), Gaps = 23/368 (6%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           R +G+W        A+ ++ A+   ++     +D   I ++D+ G   ++    ++ G++
Sbjct: 20  RLSGSWVLATALPQAE-LLQAVPDGVRR----IDARGIGQLDSAGVLQLL----RFAGRM 70

Query: 70  KLQGVSTHI-EQLFSLISFTHRKKIKNQKPQRSFFY----NSFKNLHYHIGKKIVKFIND 124
            L+  +    ++  +L+        +  KP+R + +    +      + +G+ I++  + 
Sbjct: 71  GLKEDAIDFRDEHQALVCTIEELNDERPKPKRDYGFVAALDRLGRTTHGVGQGILELNS- 129

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG  +           +F+  L S +  M  VG+  VP+V+L+S++ GAVIA 
Sbjct: 130 ------FLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAF 181

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            G+  L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAI
Sbjct: 182 LGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAI 241

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           RT+GLD + +L+ PR+ ALI +LPLLT +A  + + G   V     DIP  ++ +R H T
Sbjct: 242 RTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDT 301

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ 
Sbjct: 302 IQLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIA 361

Query: 365 AIFYFAIG 372
           A+++  +G
Sbjct: 362 ALWFMKMG 369


>gi|319788025|ref|YP_004147500.1| hypothetical protein Psesu_2437 [Pseudoxanthomonas suwonensis 11-1]
 gi|317466537|gb|ADV28269.1| protein of unknown function DUF140 [Pseudoxanthomonas suwonensis
           11-1]
          Length = 371

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/371 (34%), Positives = 199/371 (53%), Gaps = 29/371 (7%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           R  G+W      E+A     A  + I  D A VD S +  ID+ G    M  + ++  + 
Sbjct: 21  RLQGDWILDHALEMA-----ARLREIPGDVASVDASGVGRIDSAG----MMQLARFARRR 71

Query: 70  KLQGVSTHI-EQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLH------YHIGKKIVKFI 122
           +L   + H  E    L+     + + + +P+R   Y     L       + +G+ IV+  
Sbjct: 72  ELADDALHFSESHLPLVQLI--EDVPDDRPRRKRDYGFAAALERLGRATHTVGRNIVE-- 127

Query: 123 NDSCSQAHILGLVISN-TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                   +LG    N            +  L + +  M  VG+  +P+V L+S++ GAV
Sbjct: 128 --------LLGFTGENLVKLLRLLRQPRRFRLTATVSHMEQVGLDALPLVALLSYLVGAV 179

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IA  G+  L+ FGAEIF ++L+SI  LRE  VLLTA+++AGR+ SA  A+IGSMK  EEI
Sbjct: 180 IAFLGSTILADFGAEIFVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGSMKAREEI 239

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DAIRT+GLD + +L+ PR+ AL++ LPLLT +A  + + G   V     +IP  ++ +R 
Sbjct: 240 DAIRTLGLDPIELLVIPRLVALLVMLPLLTFVAMMAGLAGGVTVGAFDLEIPPQMYLARM 299

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
             T  + +   G+ KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VIIID
Sbjct: 300 EETMQVRHFLVGMSKAPVFAMVIGLIGCLEGMRVQGSAQSVGERTTSSVVQTISLVIIID 359

Query: 362 SLFAIFYFAIG 372
           +L A+++  +G
Sbjct: 360 ALAALWFMNMG 370


>gi|71274907|ref|ZP_00651195.1| Protein of unknown function DUF140 [Xylella fastidiosa Dixon]
 gi|71898795|ref|ZP_00680963.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1]
 gi|71901849|ref|ZP_00683912.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1]
 gi|170729829|ref|YP_001775262.1| ABC transporter permease [Xylella fastidiosa M12]
 gi|71164639|gb|EAO14353.1| Protein of unknown function DUF140 [Xylella fastidiosa Dixon]
 gi|71728377|gb|EAO30545.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1]
 gi|71731381|gb|EAO33444.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1]
 gi|167964622|gb|ACA11632.1| ABC transporter permease [Xylella fastidiosa M12]
          Length = 372

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/363 (34%), Positives = 205/363 (56%), Gaps = 15/363 (4%)

Query: 11  FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK 70
            +G+W    +   A +++ + + SIQ     ++   I ++D+ GA  ++ F  +    +K
Sbjct: 23  LSGSWVLANVLT-ASELLQSYSNSIQH----INARNIDQLDSAGALQLLRFATRT--GLK 75

Query: 71  LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF-FYNSFKNLHYHIGKKIVKFINDSCSQA 129
            + +    E+   LIS       ++ KP+R + F  + + L   +  K  + I D CS  
Sbjct: 76  NEAIEFR-EEHRPLISTIEILDDEHPKPERDYGFLAALERLGIAV-VKTRRNIIDVCS-- 131

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
             LG  +    +      +F+  + S +  M  VG+  VP+V+++S++ GAVIA  G+  
Sbjct: 132 -FLGENLVKIAQLAREPRRFR--ITSTVHHMEQVGLDAVPLVVVLSYLVGAVIAFLGSTI 188

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L  FGAEIF ++L++I  LRE  VLLTA+++AGR+ SA  A+IG+MK  EEIDAI+T+GL
Sbjct: 189 LRNFGAEIFVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEIDAIQTLGL 248

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
           D + +L+ PR+ AL++ LPLLT +A  + + G   V      IP  ++ SR H T    +
Sbjct: 249 DPIDLLVIPRLIALLVMLPLLTFIAMIAGLAGGITVGAFDLGIPPQMYLSRMHETMQFRH 308

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              G+ KAP  A  IG++   EG  V   + S+GK  T+ VVQ+IS+VIIID+L A+++ 
Sbjct: 309 FIIGMSKAPLFALIIGLIGCLEGLKVTGTAQSVGKHTTSSVVQTISLVIIIDALAALWFM 368

Query: 370 AIG 372
            +G
Sbjct: 369 RMG 371


>gi|114798707|ref|YP_761599.1| hypothetical protein HNE_2921 [Hyphomonas neptunium ATCC 15444]
 gi|114738881|gb|ABI77006.1| putative membrane protein [Hyphomonas neptunium ATCC 15444]
          Length = 375

 Score =  190 bits (483), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/372 (30%), Positives = 197/372 (52%), Gaps = 10/372 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S+ G  V R  G+W    I+++ D  + A+++S+      +D+S +  +DT GA LI   
Sbjct: 14  SDEG-NVLRLGGDWTVATINQL-DAQLRAVSQSV---PICLDVSGLGRLDTSGAYLIDRT 68

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
             +       + V  H     SL+   H        P ++        +    GK  V F
Sbjct: 69  WRENGAAWPPRIVGDHASAA-SLLEQVHAHAEPVPPPAKA--DAGLLAMLERTGKGSVDF 125

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             ++ +    LG  +          +K +    S++  M   G++ +P++  +SF  G V
Sbjct: 126 YKETTASLAFLGETLVTIVRLLVQPWKLR--WTSIVAVMEEAGLNAMPIIAFLSFFVGMV 183

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A  GA  L  F  EI++I+L+    LRE GV+LT +++AGR+ S+  A+IG+MK+ +E+
Sbjct: 184 VAFIGATTLKDFDLEIYTIELIGFSMLREFGVVLTGIVLAGRTNSSFTAQIGTMKMRQEV 243

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA++T+GL  + +L++PR+ A+++  P+LT +A  + + G + V W   DI  AVF  R 
Sbjct: 244 DAMQTLGLKPMDVLVAPRVLAMLVMTPILTFVATLAGVAGGATVAWAALDINPAVFVERM 303

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            ++  +   + G+ K+P     + ++A ++G  VG    SLGK  TT VVQ+I  +I+ID
Sbjct: 304 RNSVPIDQFWIGMSKSPVFGLVVALIACRQGLQVGGSVQSLGKATTTSVVQAIFAIIVID 363

Query: 362 SLFAIFYFAIGI 373
           ++FAIFY  +G+
Sbjct: 364 AIFAIFYMELGL 375


>gi|15837904|ref|NP_298592.1| hypothetical protein XF1303 [Xylella fastidiosa 9a5c]
 gi|9106294|gb|AAF84112.1|AE003963_9 conserved hypothetical protein [Xylella fastidiosa 9a5c]
          Length = 396

 Score =  190 bits (483), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 126/363 (34%), Positives = 200/363 (55%), Gaps = 15/363 (4%)

Query: 11  FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK 70
            +G+W    +   A +++ + + SIQ     ++   I ++D+ GA  ++ F  +   K  
Sbjct: 47  LSGSWVLANVLT-ASELLQSYSNSIQH----INARNIDQLDSAGALQLLRFATRTGLKND 101

Query: 71  LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF-FYNSFKNLHYHIGKKIVKFINDSCSQA 129
             G       L S I     +     KP+R + F  + + L   +  K  + I D CS  
Sbjct: 102 AIGFREEHRPLISTIEILDDEY---PKPERDYGFLAALERLGIAV-VKTRRNIVDVCS-- 155

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
             LG  +    +      +F+  + S +  M  VG+  VP+V+++S++ GAVIA  G+  
Sbjct: 156 -FLGENLVKIAQLAREPRRFR--ITSTVHHMEQVGLDAVPLVVVLSYLVGAVIAFLGSTI 212

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L  FGAEIF ++L++I  LRE  VLLTA+++AGR+ SA  A+IG+MK  EEIDAI+T+GL
Sbjct: 213 LRNFGAEIFVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEIDAIQTLGL 272

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
           D + +L+ PR+ AL++ LPLLT +A  + + G   V      IP  ++ SR H T    +
Sbjct: 273 DPIDLLVIPRLIALLVMLPLLTFIAMIAGLAGGITVGAFDLGIPPQMYLSRMHETMQFRH 332

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              G+ KAP  A  IG++   EG  V   + S+GK  T+ VVQ+IS+VIIID+L A+++ 
Sbjct: 333 FIIGMSKAPLFALIIGLIGCLEGLKVTGTAQSVGKHTTSSVVQTISLVIIIDALAALWFM 392

Query: 370 AIG 372
            +G
Sbjct: 393 RMG 395


>gi|307297001|ref|ZP_07576817.1| protein of unknown function DUF140 [Sphingobium chlorophenolicum
           L-1]
 gi|306877527|gb|EFN08755.1| protein of unknown function DUF140 [Sphingobium chlorophenolicum
           L-1]
          Length = 376

 Score =  189 bits (481), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 116/370 (31%), Positives = 199/370 (53%), Gaps = 14/370 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
             G TV R +GN     + ++ + +      +I+     +DLS +  +DTIGA ++   +
Sbjct: 19  REGRTVIRLSGNLSIACLHDLPNRL-----DAIEGPVDTIDLSGVDHMDTIGAWVLHRTI 73

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++   KI   G     E+L + +         N +P        ++ +   IG+ +V   
Sbjct: 74  KRLDCKIT--GDKCDAERLITTVGSVDEPV--NIRPDHE---PPWQRVVGQIGEAVVNSG 126

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                     G  +  T        +F+  + +++++   VGVS + ++ L+SF+ G VI
Sbjct: 127 TTLLGLLGFFGGTLVATWNVIRHPGRFR--INAVVQRFEVVGVSALGIIGLMSFLIGIVI 184

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQG+ QL QFG E+ +I+L+  L  RE+GVL+TA+M+AGRSGSA  A++G+MK+ EE+D
Sbjct: 185 AQQGSVQLRQFGMEMLTINLVGRLTFRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEVD 244

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+RT+G+  +  L+ PR  A+++ +PLL+  A+  AIIG   +     DIP   F  R  
Sbjct: 245 AMRTIGVSPMEALVLPRTLAVVVMMPLLSFYASIVAIIGGGFLCAVSLDIPPITFVQRLR 304

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               + +++ GLIKAP     I +    +G  V  ++  +G + T  VVQ+I +VI++D+
Sbjct: 305 EVVPIHDLWVGLIKAPVFGVIIALAGCFQGMQVKANAEEVGLRTTAAVVQAIFLVIVLDA 364

Query: 363 LFAIFYFAIG 372
            FA+F+  +G
Sbjct: 365 FFAVFFTWVG 374


>gi|82702739|ref|YP_412305.1| hypothetical protein Nmul_A1612 [Nitrosospira multiformis ATCC
           25196]
 gi|82410804|gb|ABB74913.1| Protein of unknown function DUF140 [Nitrosospira multiformis ATCC
           25196]
          Length = 384

 Score =  189 bits (480), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 117/365 (32%), Positives = 198/365 (54%), Gaps = 11/365 (3%)

Query: 13  GNWKSPEISEIADDVVMAINKS--IQSDSAIVDLSAITEIDTIGAELIMYFM-EKYHGKI 69
           GNW     + + + + +  ++S  + +    VDL  +  +DT GA  +   +  +  G++
Sbjct: 25  GNWTLENYAALGEQIALLRHRSRGLAAAGRNVDLGGLAALDTAGAARLYELLGAELAGEL 84

Query: 70  KL-QGVSTHIEQLFSLISFTHRKKIK-NQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
                +S     L  +++       K +Q+ QR  F   F     H G  +  F     +
Sbjct: 85  AASDALSRERSALLLMVAKAMEAAGKVSQRRQRGAFIEIFG----HAGVALEIFRQQILA 140

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +G  +           +++  L S++ Q++  G++ VP++ L++F+ GAVIA  GA
Sbjct: 141 LLGFMGFTLDALARGLLHPKRWR--LTSIVAQIHETGLNAVPIIALLNFMVGAVIAFLGA 198

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L+ FGA I++++L++   LRE+GVLLTA+++AGR+ S   A++GSMKINEEIDA R +
Sbjct: 199 TVLANFGASIYTVNLVTFAFLRELGVLLTAILMAGRTASTFTAQLGSMKINEEIDATRVL 258

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GL+ V +L+ PR+ AL +SLP+LT +   S I+G ++V     DI  A+F + F     L
Sbjct: 259 GLNPVNLLVLPRVLALFVSLPILTFVGMISGILGGALVCALQLDISLAMFLTIFQDQIEL 318

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   G+ KAP  A  IG++   EG  V   + S+G+  T  VV SI +VI +D++ A+F
Sbjct: 319 RHFLVGMSKAPVFAFVIGVIGCLEGLKVSGSALSVGQHTTASVVHSIFVVIFLDAMAALF 378

Query: 368 YFAIG 372
           +  +G
Sbjct: 379 FMEMG 383


>gi|194364302|ref|YP_002026912.1| hypothetical protein Smal_0524 [Stenotrophomonas maltophilia
           R551-3]
 gi|194347106|gb|ACF50229.1| protein of unknown function DUF140 [Stenotrophomonas maltophilia
           R551-3]
          Length = 373

 Score =  189 bits (479), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 122/366 (33%), Positives = 202/366 (55%), Gaps = 21/366 (5%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66
           + R +G W + + +  A +V+  +  ++      +D + I ++D+ G   ++    +   
Sbjct: 21  LIRLSGTW-TLKTALAAAEVLRDVPDTLTG----IDATGIEKMDSAGVLQVLRVAHRADL 75

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF-FYNSFKNL--HYHIGKKIVKFIN 123
           G+  LQ    H     +L+           KP+R F    + + L    H     +K + 
Sbjct: 76  GEDALQFRPDH----QALVCTIEEVADDRPKPKRDFGVLAALERLGVSVHATGHNIKAL- 130

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
             CS    LG  +           +F+  L + + QM  VG+  VP+V L+S++ GAVIA
Sbjct: 131 --CS---FLGENLVKAARLVKEPRRFR--LTATVHQMEQVGLDAVPLVALLSYLVGAVIA 183

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
             G+  L  FGAEI+ ++L++I  LRE  VLLTA+++AGR+ SA  A+IG+MK  EEIDA
Sbjct: 184 FLGSTILRDFGAEIYVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKAREEIDA 243

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +RT+GLD + +L+ PR++AL+++LPLLT +A  + + G   V     DIP  ++ +R H 
Sbjct: 244 MRTLGLDPIDLLVLPRLFALLVTLPLLTFIAMVAGLAGGITVGAFDLDIPPQMYIARMHD 303

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
           T  + ++  GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VIIID+ 
Sbjct: 304 TMEVRHMLVGLSKAPVFALVIGLIGCLEGLKVEGTAQSVGERTTSSVVQTISLVIIIDAF 363

Query: 364 FAIFYF 369
            A+++ 
Sbjct: 364 AALWFM 369


>gi|237808113|ref|YP_002892553.1| hypothetical protein Tola_1352 [Tolumonas auensis DSM 9187]
 gi|237500374|gb|ACQ92967.1| protein of unknown function DUF140 [Tolumonas auensis DSM 9187]
          Length = 381

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/377 (31%), Positives = 210/377 (55%), Gaps = 24/377 (6%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIV--DLSAITEIDTIGAELIMY 60
           E+G  + R +G+W       +   +  ++ + + +D+ I+  DL ++   DT GA L++ 
Sbjct: 15  ESGHVLLRISGDWTLTHYVMLKRQIT-SVQEQMIADTPILWDDLGSL---DTAGAALLVE 70

Query: 61  FMEKYHGKIKLQGVSTH--------IEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHY 112
            +    G+++L  ++T         +  L S+ +         ++P+ S    +   +  
Sbjct: 71  LL----GQVRLSLLTTQDSGLSAERLALLHSVAAALKESTNIEKQPKES----AISEMLA 122

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172
           HIG+ ++       +    +GL I           +++  + SL   +   G++ +P++ 
Sbjct: 123 HIGQVVIHLGQQQIALLGFIGLTIETLVRSLIHPRRWR--ITSLAAHIEQTGLNAIPIIA 180

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
           L++F+ GAV+A  G   LS FGA I+++DL++   LRE GVLLTA+++AGR+ SA  A+I
Sbjct: 181 LLTFLVGAVVAFLGTTVLSDFGASIYTVDLVAFAFLREFGVLLTAILMAGRTASAFTAQI 240

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           GSMK NEEIDAIR +GL+ + +L+ PR+ A++ISLP+LT +A    +IG ++V +   DI
Sbjct: 241 GSMKANEEIDAIRALGLNPIELLVLPRVLAMLISLPILTFIAMACGMIGGAVVCFLELDI 300

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
              +F +       +++ F G+ KAP  A  + ++   EGF VG  + S+G+   + VVQ
Sbjct: 301 TPRLFLTILQRDIDISHFFVGIGKAPLFAFIVAVIGCLEGFKVGGSAQSVGEHTISSVVQ 360

Query: 353 SISIVIIIDSLFAIFYF 369
           SI +VI++D+L A+F+ 
Sbjct: 361 SIFMVILLDALAALFFM 377


>gi|153951693|ref|YP_001398923.1| ABC transporter permease [Campylobacter jejuni subsp. doylei
           269.97]
 gi|152939139|gb|ABS43880.1| putative ABC transporter, permease protein [Campylobacter jejuni
           subsp. doylei 269.97]
          Length = 369

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/379 (33%), Positives = 197/379 (51%), Gaps = 24/379 (6%)

Query: 7   TVFRFAGN-------WKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
           T F+F  N       W    I ++     +A+   IQS   I D   + EIDT G    +
Sbjct: 3   TNFKFQNNTLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKEIDTAGVRFFL 59

Query: 60  YF---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF--FYNSFKNLHYHI 114
                ++  + KI  +G+++  + LF L    +++  K +K  ++F  ++     L   +
Sbjct: 60  ALENDLKDKNIKITKEGLNSRFQTLFELCEKNYQRLNKTKKSHKNFSEYFIDLGKLSLEL 119

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
            K + KFIN + +    L L + N   F     +F  FL  +    +      +P+VIL 
Sbjct: 120 LKILRKFINFTGAFFTSLFLCLKNPKNF-----RFIAFLYHIENSAF----KALPIVILT 170

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           + + G V+A Q A+QL+QFGA IF +DLM I   RE+  L+ A++IAGRS S+  A+IG 
Sbjct: 171 ALLVGVVLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGV 230

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           MKI +EI A+ TMG      +I PR+ AL++++PL+  +++  +IIG  +V     DI F
Sbjct: 231 MKITDEIAAMNTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISF 290

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
           A F  RF     + +IF GL+KAP     IG++A   GF V   + S+G   T  VV +I
Sbjct: 291 AEFLRRFREAVDIKHIFIGLVKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAI 350

Query: 355 SIVIIIDSLFAIFYFAIGI 373
             VI  D+LF++   + GI
Sbjct: 351 FWVIAFDALFSVILTSAGI 369


>gi|296284592|ref|ZP_06862590.1| putative ABC transport system permease protein [Citromicrobium
           bathyomarinum JL354]
          Length = 370

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/371 (31%), Positives = 198/371 (53%), Gaps = 14/371 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            + G TV R  G +    I+ +   +     + +  D  ++DL+ ++EIDT+GA      
Sbjct: 12  GDGGRTVLRLKGPYLLSTIANVDRGL-----RKLDDDIDVIDLAEVSEIDTVGAWFACTL 66

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
              +   I  +  S   ++L + +  +         P+      + + +    G+K+ + 
Sbjct: 67  ARNHSASI--ENASERADRLLTAVGESANSS-DVSAPRLPLLTRAPEAM----GEKVFEA 119

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                S     G +++          +F+    +++ Q   VGV+ +P++ L+SF+ G V
Sbjct: 120 GRGIVSVVGFFGQILAGAASLIRHPRRFR--HRAMVHQFESVGVNALPIIGLMSFLIGIV 177

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IAQQGA QL  FGAE  +++L+  + LRE+GVL+TA+M+AGRSGSA  A+IG+MK+ EEI
Sbjct: 178 IAQQGAVQLQAFGAEALTVNLVGRITLRELGVLMTAIMVAGRSGSAFAAQIGTMKLTEEI 237

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+RT+G+  V +L+ PR+ A +  + LL   A+  AIIG ++V      IPF  F  R 
Sbjct: 238 DAMRTIGISPVEVLVIPRLVACVFMMILLGFYASCMAIIGGAVVSDVMLGIPFWTFLMRI 297

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           H      +++ G+IKAP     +G+    +G  V  +S  +G + T  VVQ+I  VI++D
Sbjct: 298 HEVVPAHDVWVGMIKAPVFGLIVGMSGCYQGMQVRGNSEEVGLRTTKAVVQAIFTVIVLD 357

Query: 362 SLFAIFYFAIG 372
           + FA+F+  IG
Sbjct: 358 AFFAVFFTGIG 368


>gi|326388333|ref|ZP_08209929.1| hypothetical protein Y88_3216 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326207065|gb|EGD57886.1| hypothetical protein Y88_3216 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 370

 Score =  187 bits (474), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 183/340 (53%), Gaps = 8/340 (2%)

Query: 33  KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKK 92
           + I++  A +DL+ +  +DT+GA            +I       H  +    +     K 
Sbjct: 37  REIETPIARIDLADVPMMDTVGAWTCWRLSRDTGAEI------VHPCEAAERLIGALEKV 90

Query: 93  IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGF 152
               +P ++     +  +   +G  +      +       G ++  T        +F+  
Sbjct: 91  DDGGEPTQAGGLPVWLRVPAKVGDTVFGLAAGAVEVLGFFGQMLLATWGLLRHPGRFR-- 148

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
             +L+ QM  VGV+ + +V L+SF+ G VIAQQGA QL QFGAE+++++L+  L LRE+G
Sbjct: 149 FNALVHQMELVGVNALAIVGLMSFLVGIVIAQQGAVQLRQFGAEVYTVNLVGRLTLRELG 208

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
           +L+TA+M+AGRSGSA  A++G+MK+NEEIDA+RT+G+  +  L+ PRI A ++ LP+L +
Sbjct: 209 ILMTAIMVAGRSGSAFAAQLGTMKLNEEIDAMRTIGVSPMEALVLPRILATVLMLPVLGV 268

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
            +    IIG + +     DIPF  F +R      + +++ GL K P     + +    +G
Sbjct: 269 YSAVVGIIGGAFLSSLTLDIPFFSFLARIREVVPVHDVWVGLFKGPVFGLIVSVAGCYQG 328

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
             V  ++  +G + T+ VV +I  VI++D+ FA+F+  +G
Sbjct: 329 MQVKANAEEVGLRTTSAVVMAIFTVIVLDAFFAVFFTEVG 368


>gi|300312192|ref|YP_003776284.1| organic solvents resistance ABC transporter permease
           [Herbaspirillum seropedicae SmR1]
 gi|300074977|gb|ADJ64376.1| ABC-type transport system involved in resistance to organic
           solvents, permease component protein [Herbaspirillum
           seropedicae SmR1]
          Length = 380

 Score =  186 bits (473), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 200/369 (54%), Gaps = 12/369 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           V    G+W       ++  +  A  +    +  +++ SA++  DT+GA+L++  +     
Sbjct: 19  VLHVEGDWTLRNYRALSRQIAQA--RPALGEQTVLEFSALSAFDTVGAKLLVDLLGVPAA 76

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKI----KNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
             + Q  ST      +L++     K     K   P++++  +  +     +G   +    
Sbjct: 77  LRQTQADSTLAPAWRALLAVVAEAKAIAMPKPAPPRQAWITDMLE----RVGAATLSLRA 132

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
            +      +GL +           +++  + +++ Q+   G+  VP+V L++F+ GAV+A
Sbjct: 133 CALGLLGFMGLCLQTLLSSFWRPSRWR--VTAVVAQIEQTGLDAVPIVSLLTFMVGAVVA 190

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
             GA  L+ FGA I+++DL++   LRE  VLLTA+++AGR+ S+  A+IGSMK NEEIDA
Sbjct: 191 FLGATVLANFGASIYTVDLVAFSFLREFAVLLTAILMAGRTASSFTAQIGSMKANEEIDA 250

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           IR +GLD +++L+ PR+ AL++++P LT +A  S + G ++V     DI   +F S    
Sbjct: 251 IRALGLDPIKLLVLPRLIALLVAMPALTFIAMLSGLFGGAMVCALSLDISPTMFLSLLQQ 310

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              + +   G++KAP  A  + ++   EGF V   + S+G+  T+ VVQSI +VI++D+L
Sbjct: 311 DVGIRHFILGMVKAPLFAFVVAVIGCNEGFKVSGSAQSVGQHTTSSVVQSIFVVILLDAL 370

Query: 364 FAIFYFAIG 372
            A+F+  +G
Sbjct: 371 AALFFMEMG 379


>gi|83858858|ref|ZP_00952380.1| ABC transporter, permease protein, putative [Oceanicaulis
           alexandrii HTCC2633]
 gi|83853681|gb|EAP91533.1| ABC transporter, permease protein, putative [Oceanicaulis
           alexandrii HTCC2633]
          Length = 384

 Score =  186 bits (473), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/367 (32%), Positives = 182/367 (49%), Gaps = 17/367 (4%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72
           G+W    +    D  +  I         ++DLS +  IDT GA    Y + +   + +  
Sbjct: 29  GDWLMEAVGRF-DRRLRRIESETDPKDLVIDLSGLGRIDTAGA----YVLGRTLSRCREP 83

Query: 73  GVSTHIEQLFSLISFTHRKKIKN--QK----PQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
               H    F     T R+ +    Q+    P+         +    IG+ +   + ++ 
Sbjct: 84  DADRH----FIGEHQTARRMMGEMLQRLADCPEDEIQPRGVISTLARIGQGVEDGLKETV 139

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
                 G   +       +  K +    S I  M   GV  +P++ ++SF  GAV+A  G
Sbjct: 140 ESFAFFGRTFTTGLSVLVNPTKMR--WTSTIHLMETAGVDALPIISVLSFFIGAVVAFMG 197

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A  L  FGA +F++DL+ I  LRE GV++TA+++AGRS SA  A IGSMK+ +EIDA++ 
Sbjct: 198 ASLLETFGASVFTVDLVGIAVLREFGVIITAILLAGRSDSAFTAAIGSMKMQQEIDAMKV 257

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MGLD   +L+ PR+ A ++  PLLT+ A  + + G  +V W   DI    F +R + T  
Sbjct: 258 MGLDPYEVLVLPRVIACVVMAPLLTLSAMVAGVFGGMLVSWMTLDISPNFFLTRLNDTID 317

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L +   G+ KAP     I IV  + G  VG    SLGK+VTT VVQ+I  VI+ID+LFA+
Sbjct: 318 LKHFLVGMSKAPVFGLVIAIVGCRHGLQVGGDVESLGKRVTTSVVQAIFAVIVIDALFAM 377

Query: 367 FYFAIGI 373
            Y  + I
Sbjct: 378 MYLELDI 384


>gi|329851286|ref|ZP_08266043.1| hypothetical protein ABI_41270 [Asticcacaulis biprosthecum C19]
 gi|328840132|gb|EGF89704.1| hypothetical protein ABI_41270 [Asticcacaulis biprosthecum C19]
          Length = 363

 Score =  186 bits (473), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 123/370 (33%), Positives = 195/370 (52%), Gaps = 21/370 (5%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           + R  GNW    I  +++ +  A+ KS Q  +  VD S I  +DT GA    Y +    G
Sbjct: 1   MLRPKGNWIVTRIEGLSERLRQAL-KSYQQIT--VDGSQIEALDTAGA----YLLRTAVG 53

Query: 68  KIKLQGV----STHIEQLFSLISFTHRKKI-----KNQKPQRSFFYNSFKNLHYHIGKKI 118
             +LQG       +  +L+ ++   H   I     +N +P + + +  +  L   +GK  
Sbjct: 54  D-RLQGEVFAGQDNFARLYGIVG-NHAAPISNYAQENPEPPKMWLHPFYFGL-VKLGKLA 110

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
            +F     +QA  +G +I+      A     +    +L+  M   G+  +P+V++ SF  
Sbjct: 111 ERFKTGFIAQAVFMGHIIAQLMISIAKPGSMR--WAALVNVMQRAGIEAIPIVLMTSFFI 168

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GAV+   G  QL+QFG+ IF++D++++  LRE   L+TAV++AGRS SA  AE+G+MK+N
Sbjct: 169 GAVLGFIGVLQLNQFGSGIFAVDMVAMFALREFAPLVTAVLLAGRSASAFAAEVGAMKMN 228

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           +EIDA+R MG+D    LI PR+  L++    +T L+    + G  + IW       +VF 
Sbjct: 229 QEIDAMRVMGIDPYEALILPRLIGLVLMSTFITFLSTLGMMFGGMLAIWSALGAGPSVFL 288

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
            R        N F G+++ PF A  I IV   +G  V     SLG++VTT VVQSI +V 
Sbjct: 289 QRVQDYVPFYNFFVGIVRPPFFAATIAIVGCWQGMQVKDDVLSLGRQVTTAVVQSIFLVF 348

Query: 359 IIDSLFAIFY 368
           ++D+LFAI +
Sbjct: 349 MLDALFAILF 358


>gi|294010007|ref|YP_003543467.1| ABC-type transport system permease component LinK [Sphingobium
           japonicum UT26S]
 gi|292673337|dbj|BAI94855.1| ABC-type transport system permease component LinK [Sphingobium
           japonicum UT26S]
          Length = 376

 Score =  186 bits (472), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 116/370 (31%), Positives = 197/370 (53%), Gaps = 14/370 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
             G TV R +GN     + ++ D +      +I+     +DLS +  +DTIGA ++   +
Sbjct: 19  REGRTVIRLSGNLSIACLHDLPDRL-----DAIEGPVDTIDLSDVGHMDTIGAWVLHRAI 73

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I   G     E+L + +         N +P        ++ +   IG+ +V   
Sbjct: 74  KRLDCGIT--GDKCDAERLIATVGSVDEPV--NIRPDHE---PPWQRVVGQIGEAVVNSG 126

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                     G  +  T        +F+  + +++++   VGVS + ++ L+SF+ G VI
Sbjct: 127 TTLLGLLGFFGGTLVATWNVIRHPGRFR--INAVVQRFEVVGVSALGIIGLMSFLIGIVI 184

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQG+ QL QFG E+ +I+L+  L  RE+GVL+TA+M+AGRSGSA  A++G+MK+ EE+D
Sbjct: 185 AQQGSVQLRQFGMEMLTINLVGRLTFRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEVD 244

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+RT+G+  +  L+ PR  A+++ +PLL   ++  AIIG   +     DIP   F  R  
Sbjct: 245 AMRTIGVSPMEALVLPRTLAVVVMMPLLGFYSSIVAIIGGGFLCAVSLDIPPITFVQRLR 304

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               + +++ GLIKAP     I +    +G  V  ++  +G + T  VVQ+I +VI+ID+
Sbjct: 305 EVVPIHDLWVGLIKAPVFGVIIALAGCFQGMQVKANAEEVGLRTTAAVVQAIFLVIVIDA 364

Query: 363 LFAIFYFAIG 372
            FA+F+  +G
Sbjct: 365 FFAVFFTWVG 374


>gi|332187454|ref|ZP_08389192.1| hypothetical protein SUS17_2546 [Sphingomonas sp. S17]
 gi|332012615|gb|EGI54682.1| hypothetical protein SUS17_2546 [Sphingomonas sp. S17]
          Length = 368

 Score =  186 bits (472), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 191/366 (52%), Gaps = 18/366 (4%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            RF GN     + ++ + +      S+Q     +DLS +  IDT+GA L+  F  +    
Sbjct: 17  LRFTGNLSLATLGDLPERLDRE-EASVQR----IDLSQVDRIDTVGAWLVHRFAARNDAA 71

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKP--QRSFFYNSFKNLHYHIGKKIVKFINDSC 126
           I  +G+  +   L         K ++  +P   R    + F  +   +G  ++       
Sbjct: 72  I--EGLDENQRNLVD-------KVVEADQPVAMRPQPISPFARVAGEVGDAVITAFKTLY 122

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
                +G  +           +F+    +++ +   VGVS + ++ L+SF+ G VIAQQG
Sbjct: 123 GLLGFMGATVIAGFAVLRHPRRFR--FNAVVHEFETVGVSALAIIGLMSFLIGIVIAQQG 180

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A QL QFGAE+F+I+L+  L LRE+GVL+TA+M+AGRSGSA  A++G+MK+ EEIDA+R 
Sbjct: 181 AVQLRQFGAEVFTINLVGRLTLRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEIDAMRV 240

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +G+  +  L+ PR  A +  +PLL   ++  A+IG   +      IP   F +R      
Sbjct: 241 IGVSPMEALVLPRTIAAVTLMPLLGFYSSLIAMIGGCFLAAVSLGIPPVTFIARIREVVP 300

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           + +++ GLIKAP     I I    +G  V   +  +G + T  VVQ+I +VI++D+ FA+
Sbjct: 301 ITDLYVGLIKAPVFGAIIAIAGCFQGMQVKSDAEQVGLRTTAAVVQAIFLVIVLDAFFAV 360

Query: 367 FYFAIG 372
           F+  +G
Sbjct: 361 FFTWLG 366


>gi|283957032|ref|ZP_06374504.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 1336]
 gi|283791533|gb|EFC30330.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 1336]
          Length = 369

 Score =  185 bits (470), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 125/379 (32%), Positives = 196/379 (51%), Gaps = 24/379 (6%)

Query: 7   TVFRFAGN-------WKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
           T F+F  N       W    I ++     +A+   IQS   I D   +  IDT G    +
Sbjct: 3   TNFKFQNNTLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFL 59

Query: 60  YF---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF--FYNSFKNLHYHI 114
                ++  + KI  +G+++  + LF L    +++  K +K  ++F  ++     L   +
Sbjct: 60  ALENDLKDKNIKITKEGLNSRFQTLFELCEKNYQRLSKTKKSHKNFSEYFIDLGKLSLEL 119

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
            K + KFIN + +    L L + N   F     +F  FL  +    +      +P+VIL 
Sbjct: 120 LKILRKFINFTGAFFTSLFLCLKNPKNF-----RFIAFLYHIENSAF----KALPIVILT 170

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           + + G V+A Q A+QL+QFGA IF +DLM I   RE+  L+ A++IAGRS S+  A+IG 
Sbjct: 171 ALLVGVVLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGV 230

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           MKI +EI A+ TMG      +I PR+ AL++++PL+  +++  +IIG  +V     DI F
Sbjct: 231 MKITDEIAAMNTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISF 290

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
           A F  RF     + +IF GL+KAP     IG++A   GF V   + S+G   T  VV +I
Sbjct: 291 AEFLRRFREAVDIKHIFIGLVKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAI 350

Query: 355 SIVIIIDSLFAIFYFAIGI 373
             VI  D+LF++   + GI
Sbjct: 351 FWVIAFDALFSVILTSAGI 369


>gi|260425314|ref|ZP_05779294.1| ABC transporter, inner membrane subunit [Citreicella sp. SE45]
 gi|260423254|gb|EEX16504.1| ABC transporter, inner membrane subunit [Citreicella sp. SE45]
          Length = 366

 Score =  185 bits (470), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 116/334 (34%), Positives = 196/334 (58%), Gaps = 7/334 (2%)

Query: 43  DLSAITEIDTIGAELIMYFMEK--YHGK-IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
           DLS +  +DT GA L+          G+ I + G S     L   ++       K ++P+
Sbjct: 37  DLSGVGVLDTAGAWLLASCRNAAALRGETIAVIGASPAQTLLLETVTDAMADAAKVRQPR 96

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
               +++  +    +G+ + K ++        LGLV++  G       + +  L +L+  
Sbjct: 97  G--LHHAMGDGLVGLGEAVSKKVSSIAESLGFLGLVMAQFGWTVLHPSRLR--LTALVHH 152

Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219
           M+  G++ VP+V+L+ F+ G V++ QGA QL QFGAE++ +DL++I  LRE+G+LLTAV+
Sbjct: 153 MHLAGLNAVPIVVLMGFLIGIVLSFQGASQLKQFGAEVYVVDLIAISILRELGILLTAVI 212

Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279
           +AGRS SA  A IGSMK+ EEIDA+R +GLD + +L+ PR+ AL+I LPLL  +A+ + +
Sbjct: 213 VAGRSASAFTATIGSMKMREEIDAMRVLGLDPIELLVLPRVLALVILLPLLGFIADMAGL 272

Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339
           +G +++ W    I   +F ++  +   ++++  GL KAP  A  IG+V   +G  V   +
Sbjct: 273 VGGALMAWIELGISPGMFRTQLLNNTDVSHLLIGLAKAPVFAVIIGVVGCHQGMQVKGDT 332

Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
            SLG + +  VV +I +VI++D++F+IF+   GI
Sbjct: 333 ESLGNRTSRSVVAAIFLVIVVDAMFSIFFAVWGI 366


>gi|238784662|ref|ZP_04628667.1| ABC transporter, permease protein [Yersinia bercovieri ATCC 43970]
 gi|238714434|gb|EEQ06441.1| ABC transporter, permease protein [Yersinia bercovieri ATCC 43970]
          Length = 381

 Score =  184 bits (468), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/370 (33%), Positives = 202/370 (54%), Gaps = 24/370 (6%)

Query: 13  GNW-------KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
           G+W         PE++++  ++  A+         + DLS +  +DT GA L++  + + 
Sbjct: 25  GDWVLAHYRALEPEVTQLRANLPAAV---------VFDLSQLGALDTAGATLLVLLLGEE 75

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF-KNLHYHIGKKIVKFIND 124
             K +L+ ++  +     ++  T    + +  P+ +     F   L  +IG+ +     D
Sbjct: 76  RVK-QLRKLAPTLPDERRVLLETVSHVLPDLTPEPATKAPPFWLELLSNIGRSMDNLWQD 134

Query: 125 SCSQAHILGLVISN--TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
             S    +GL +    +  F  S ++      SLI  +  +G++ VP+++L++F+ GAVI
Sbjct: 135 IKSLLGFVGLTLEALLSTIFRPSRWRMT----SLIANIQQIGLNAVPIIMLLTFLVGAVI 190

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A  GA  L+ FGA IF++DL+    LRE  VLLTA+++AGR+ SA  AEIG MK NEEID
Sbjct: 191 AFLGATVLTTFGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEID 250

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           AI+T+GL+ V +L+ PR+ AL+ISLP+LT +     I G  +V     DI   +F S   
Sbjct: 251 AIQTLGLNPVELLVLPRVLALLISLPMLTFIGMICGIFGGMVVCALTLDISPTMFLSIMQ 310

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           ++  L +   G+ KAP  A  I I+   EGF V   + S+G   TT VV SI +VI++D+
Sbjct: 311 NSNGLQHFLVGISKAPVFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDA 370

Query: 363 LFAIFYFAIG 372
           + A+F+  +G
Sbjct: 371 VAALFFMEMG 380


>gi|57238657|ref|YP_179788.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           RM1221]
 gi|57167461|gb|AAW36240.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           RM1221]
 gi|315059096|gb|ADT73425.1| Putative ABC transport system permease protein [Campylobacter
           jejuni subsp. jejuni S3]
          Length = 369

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/379 (33%), Positives = 195/379 (51%), Gaps = 24/379 (6%)

Query: 7   TVFRFAGN-------WKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
           T F+F  N       W    I ++     +A+   IQS   I D   +  IDT G    +
Sbjct: 3   TNFKFQNNTLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFL 59

Query: 60  YF---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF--FYNSFKNLHYHI 114
                ++  + KI  +G+++  + LF L    +++  K +K  ++F  ++     L   +
Sbjct: 60  ALENDLKDKNIKITKEGLNSRFQTLFELCEKNYQRLSKTKKSHKNFSEYFIDLGKLSLEL 119

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
            K + KFIN + +    L L + N   F     +F  FL  +    +      +P+VIL 
Sbjct: 120 LKILRKFINFTGAFFTSLFLCLKNPKNF-----RFIAFLYHIENSAF----KALPIVILT 170

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           + + G V+A Q A+QL+QFGA IF +DLM I   RE+  L+ A++IAGRS S+  A+IG 
Sbjct: 171 ALLVGVVLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGV 230

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           MKI +EI A+ TMG      +I PR+ ALI+++PL+  +++  +IIG  +V     DI F
Sbjct: 231 MKITDEIAAMNTMGFRSFEFIIIPRVMALIVAMPLIVAISDAISIIGGMMVAKLNLDISF 290

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
           A F  RF     + +IF GL KAP     IG++A   GF V   + S+G   T  VV +I
Sbjct: 291 AEFLRRFREAVDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAI 350

Query: 355 SIVIIIDSLFAIFYFAIGI 373
             VI  D+LF++   + GI
Sbjct: 351 FWVIAFDALFSVVLTSAGI 369


>gi|261885878|ref|ZP_06009917.1| MTA/SAH nucleosidase [Campylobacter fetus subsp. venerealis str.
           Azul-94]
          Length = 354

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/337 (33%), Positives = 186/337 (55%), Gaps = 19/337 (5%)

Query: 33  KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKK 92
           +S++ D+  +DL  +  ID   A     F  K++   KL   +   +++F+L+S  +   
Sbjct: 32  RSLKVDT--LDLKNLIRIDYSAAT----FFAKHYNCPKLINSNDKFDKIFALVSDKYILN 85

Query: 93  IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSY--KFK 150
           ++  K ++S       NL   IGK I+   N+  S    LG  + N  +   + +  +FK
Sbjct: 86  LQIIKFKKS-------NLIEQIGKNIINLKNELVSFCIFLGEFLFNLTKSLLNPFTVRFK 138

Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210
                L    Y  G+S V +V L SF+ G V+A QGA  L  FGA I+ +D+M I+ LRE
Sbjct: 139 ----ELSNHFYSAGISAVFIVCLTSFLIGIVLAYQGATMLENFGASIYVVDIMGIMTLRE 194

Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
           +G L+ A+++AGRS S+  A+IG MKI +E++A++TMG +  R ++ PR+ ALI+++P +
Sbjct: 195 VGPLIAAIVVAGRSASSYTAQIGVMKITDELEAMKTMGFEPFRFIVMPRVLALILAMPFI 254

Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330
             LAN  +I G  +V   Y D+ F+ +  RF S+  L + + GL KAPF    I ++  K
Sbjct: 255 VFLANAVSIFGQMMVCNWYLDLSFSDYLERFRSSIALRHFWVGLFKAPFFGAVIALIGCK 314

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            GF V    NS+G+  T  VV  I  +  +D++F ++
Sbjct: 315 RGFEVSGSINSVGELTTRSVVHEIFWISALDAIFLLY 351


>gi|157415866|ref|YP_001483122.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 81116]
 gi|157386830|gb|ABV53145.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 81116]
 gi|307748503|gb|ADN91773.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni M1]
 gi|315931385|gb|EFV10354.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           327]
          Length = 369

 Score =  184 bits (466), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/372 (33%), Positives = 195/372 (52%), Gaps = 18/372 (4%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---ME 63
           T+F F G W    I ++     +A+   IQS   I D   +  IDT G    +     ++
Sbjct: 11  TLFIF-GIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLK 66

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF--FYNSFKNLHYHIGKKIVKF 121
             + KI  +G+++  + LF L    +++  K +K  ++F  ++     L   + K ++KF
Sbjct: 67  DKNIKITKEGLNSRFQTLFELCEKNYQRLSKTKKSHKNFSEYFIDLGKLSLELLKILIKF 126

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
            N + +    L L + N   F     +F  FL  +    +      +P+VIL + + G V
Sbjct: 127 TNFTGAFFTSLFLCLKNPKNF-----RFIAFLYHIENSAF----KALPIVILTALLVGVV 177

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A Q A+QL+QFGA IF +DLM I   RE+  L+ A++IAGRS S+  A+IG MKI +EI
Sbjct: 178 LAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEI 237

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
            A+ TMG      +I PR+ AL++++PL+  +++  +IIG  +V     DI FA F  RF
Sbjct: 238 AAMNTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRF 297

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                + +IF GL KAP     IG++A   GF V   + S+G   T  VV +I  VI  D
Sbjct: 298 REAVDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFD 357

Query: 362 SLFAIFYFAIGI 373
           +LF++   + GI
Sbjct: 358 ALFSVVLTSAGI 369


>gi|94496554|ref|ZP_01303130.1| hypothetical protein SKA58_17657 [Sphingomonas sp. SKA58]
 gi|94423914|gb|EAT08939.1| hypothetical protein SKA58_17657 [Sphingomonas sp. SKA58]
          Length = 369

 Score =  183 bits (465), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 118/379 (31%), Positives = 200/379 (52%), Gaps = 30/379 (7%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
             +G TV R +GN     + ++   +      ++Q     VD+S +  IDTIGA  +   
Sbjct: 11  QRDGGTVIRLSGNLAIACLHDLPARL-----DAVQGPINAVDVSQVDHIDTIGAWTVHSA 65

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
            ++ +  I   G +   ++L   +         + +P +    +    +   IG  ++  
Sbjct: 66  AKRLNAPIT--GANEDAQRLIEAVGTLDEPF--SLRPDK---VSPLTRVVGQIGDAVIS- 117

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLL--------SLIRQMYYVGVSGVPVVIL 173
                +   ++GL+    G F AS     G +         +++++   VGVS + ++ L
Sbjct: 118 -----AGTTLMGLL----GFFGASLVAAWGLIRHPSRFRVNAVVQRFEVVGVSALGIIGL 168

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           +SF+ G VIAQQG+ QL QFG E+ +I+L+  L  RE+GVL+TA+M+AGRSGSA  A++G
Sbjct: 169 MSFLIGIVIAQQGSVQLRQFGMEMLTINLVGRLTFRELGVLMTAIMVAGRSGSAFAAQLG 228

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           +MK+ EEIDA+RT+G+  +  L+ PR  A+++ +PLL   A+  A+IG   +     DIP
Sbjct: 229 TMKLTEEIDAMRTIGVSPMEALVMPRTLAVVVMMPLLGFYASIVAVIGGGFLCAVALDIP 288

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              F  R      + +++ GLIKAP     I +    +G  V  ++  +G + T  VVQ+
Sbjct: 289 PITFVQRLREVVPITDLWVGLIKAPVFGIIIALSGCYQGMQVKANAEEVGLRTTAAVVQA 348

Query: 354 ISIVIIIDSLFAIFYFAIG 372
           I +VI+ID+ FA+F+  +G
Sbjct: 349 IFLVIVIDAFFAVFFTWVG 367


>gi|86152328|ref|ZP_01070539.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 260.94]
 gi|121613751|ref|YP_001001289.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 81-176]
 gi|167006183|ref|ZP_02271941.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 81-176]
 gi|315125046|ref|YP_004067050.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni ICDCCJ07001]
 gi|85840817|gb|EAQ58068.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 260.94]
 gi|87249848|gb|EAQ72807.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 81-176]
 gi|315018768|gb|ADT66861.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni ICDCCJ07001]
          Length = 369

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 125/372 (33%), Positives = 195/372 (52%), Gaps = 18/372 (4%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---ME 63
           T+F F G W    I ++     +A+   IQS   I D   +  IDT G    +     ++
Sbjct: 11  TLFIF-GIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLK 66

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF--FYNSFKNLHYHIGKKIVKF 121
             + KI  +G+++  + LF L    +++  K +K  ++F  ++     L   + K + KF
Sbjct: 67  DKNIKITKEGLNSSFQTLFELCEKNYQRLSKTKKSHKNFSEYFIDLGKLSLELLKILRKF 126

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           IN + +    L L + N   F     +F  FL  +    +      +P+VIL + + G V
Sbjct: 127 INFTGAFFTSLFLCLKNPKNF-----RFIAFLYHIENSAF----KALPIVILTALLVGVV 177

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A Q A+QL+QFGA IF +DLM I   RE+  L+ A++IAGRS S+  A+IG MKI +EI
Sbjct: 178 LAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEI 237

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
            A+ TMG      +I PR+ AL++++PL+  +++  +IIG  +V     DI FA F  RF
Sbjct: 238 AAMNTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRF 297

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                + +IF GL KAP     IG++A   GF V   + S+G   T  VV +I  VI  D
Sbjct: 298 REAVDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFD 357

Query: 362 SLFAIFYFAIGI 373
           +LF++   + GI
Sbjct: 358 ALFSVILTSAGI 369


>gi|238759499|ref|ZP_04620662.1| ABC transporter, permease protein [Yersinia aldovae ATCC 35236]
 gi|238702274|gb|EEP94828.1| ABC transporter, permease protein [Yersinia aldovae ATCC 35236]
          Length = 381

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 118/335 (35%), Positives = 187/335 (55%), Gaps = 4/335 (1%)

Query: 39  SAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
           SA+ D S +  +DT GA L+   + +      L+ ++  +     ++  T  + + N  P
Sbjct: 49  SAMFDFSQLGGLDTAGATLLATLLGELRVS-NLRELAPRLPDERRVLLETVSQVLPNLVP 107

Query: 99  QRSFFYNSFK-NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLI 157
           Q +     F   L   IG+ +     D  S    +GL +           +++  + SLI
Sbjct: 108 QLTVKPQPFWIGLLVPIGQSVDNLWQDFKSLLGFVGLTLEALLGTVFRPARWR--VTSLI 165

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
             +  +G++ VP+++L++F+ GAVIA  GA  L+ FGA IF++DL+    LRE  VLLTA
Sbjct: 166 ANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTTFGAGIFTVDLVVFSFLREFAVLLTA 225

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +++AGR+ SA  AEIG MK NEEIDAI+T+GL+ V +L+ PR+ AL+ISLP+LT +    
Sbjct: 226 ILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPVELLVLPRVLALLISLPMLTFIGMIC 285

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            I G  +V     DI   +F +   ++  L ++  G+ KAP  A  I I+   EGF V  
Sbjct: 286 GIFGGMVVCALALDISPTMFLTIMQNSNGLQHLLVGISKAPIFAFLIAIIGCLEGFKVSG 345

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
            + S+G   TT VV SI +VI++D++ A+F+  +G
Sbjct: 346 SAESVGMHTTTSVVHSIFVVILLDAVAALFFMEMG 380


>gi|197105491|ref|YP_002130868.1| ABC transporter, permease protein [Phenylobacterium zucineum HLK1]
 gi|196478911|gb|ACG78439.1| ABC transporter, permease protein [Phenylobacterium zucineum HLK1]
          Length = 375

 Score =  183 bits (464), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 184/337 (54%), Gaps = 14/337 (4%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHR-KKIKNQKPQR 100
           +DLS +  +DT GA  ++          K++     + +L  ++    R +    Q+P+ 
Sbjct: 48  IDLSGVRRLDTAGAYAVVRAAGPAFDASKVE-ARPEVRRLLEVVDEAARIQPAVRQEPK- 105

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQ----AHILGLVISNTGEFCASSYKFKGFLLSL 156
                 F +L   +GK +V F +D         H+L ++  +      +  K +    +L
Sbjct: 106 -----GFHDLTIRVGKGVVGFGHDFIDTMGFLGHLLVVLARSLVLLFVNPRKIR--WPAL 158

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +  M   G+  +PVV + +F  GAV+A  GA  L QFGAE+F+++L+ I  +RE  +++T
Sbjct: 159 VSIMERAGLDAIPVVAVATFFIGAVVAFIGADMLQQFGAEVFAVELIGISMMREFNIVIT 218

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV++AGRS S+  AEIGSMK+++EIDA++ MG+D    L+ PR  AL+I++PLLT +A  
Sbjct: 219 AVLLAGRSASSFAAEIGSMKMSQEIDAMKVMGIDPFEALVFPRFAALLITIPLLTFVATL 278

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           + ++G  +V W    +  A F  R      + + +  L KAP MA  I  +  ++G   G
Sbjct: 279 AGLLGGIVVTWSVLGLGPAFFLQRIVDNVGVDHFWIALSKAPVMAGVIAGIGCRQGLETG 338

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
               SLG++VT  VV +I  +I+ID++FA+ Y  +G+
Sbjct: 339 GDVESLGRRVTAAVVHAIFAIIVIDAIFAMIYMELGL 375


>gi|86149247|ref|ZP_01067478.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni CF93-6]
 gi|88596442|ref|ZP_01099679.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 84-25]
 gi|218563235|ref|YP_002345015.1| putative ABC transporter permease [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|85840029|gb|EAQ57287.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni CF93-6]
 gi|88191283|gb|EAQ95255.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 84-25]
 gi|112360942|emb|CAL35743.1| putative ABC transport system permease [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|284926840|gb|ADC29192.1| putative ABC transport system permease [Campylobacter jejuni subsp.
           jejuni IA3902]
 gi|315929480|gb|EFV08676.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           305]
          Length = 369

 Score =  183 bits (464), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 124/379 (32%), Positives = 195/379 (51%), Gaps = 24/379 (6%)

Query: 7   TVFRFAGN-------WKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
           T F+F  N       W    I ++     +A+   IQS   I D   +  IDT G    +
Sbjct: 3   TNFKFQNNTLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFL 59

Query: 60  YF---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF--FYNSFKNLHYHI 114
                ++  + KI  +G+++  + LF L    +++  K +K  ++F  ++     L   +
Sbjct: 60  ALENDLKNKNIKITKEGLNSRFQTLFELCEKNYQRLGKTKKSHQNFSEYFIDLGKLSLEL 119

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
            K + KFIN + +    L L + N   F     +F  FL  +    +      +P+VIL 
Sbjct: 120 LKILRKFINFTGAFFTSLFLCLKNPKNF-----RFIAFLYHIENSAF----KALPIVILT 170

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           + + G V+A Q A+QL+QFGA IF +DLM I   RE+  L+ A++IAGRS S+  A+IG 
Sbjct: 171 ALLVGVVLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGV 230

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           MKI +EI A+ TMG      ++ PR+ AL++++PL+  +++  +IIG  +V     DI F
Sbjct: 231 MKITDEIAAMNTMGFRSFEFIVIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISF 290

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
           A F  RF     + +IF GL KAP     IG++A   GF V   + S+G   T  VV +I
Sbjct: 291 AEFLRRFREAVDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAI 350

Query: 355 SIVIIIDSLFAIFYFAIGI 373
             VI  D+LF++   + GI
Sbjct: 351 FWVIAFDALFSVILTSTGI 369


>gi|295690462|ref|YP_003594155.1| hypothetical protein Cseg_3097 [Caulobacter segnis ATCC 21756]
 gi|295432365|gb|ADG11537.1| protein of unknown function DUF140 [Caulobacter segnis ATCC 21756]
          Length = 386

 Score =  182 bits (463), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 200/374 (53%), Gaps = 15/374 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G      +G+W +  + +    +  A++     D+   DL+ +   DT GA  I+  
Sbjct: 26  EQDGRPTAVLSGDWTARGLFDAGLRLAEALDGV---DNPTFDLTGVNRCDTAGAYAILRA 82

Query: 62  MEKYHGKIKLQGVSTH--IEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
            ++   ++K + V     + +L  L++     ++K++   R    + F+ L   IG+ + 
Sbjct: 83  ADE---RLKPEDVKARHGVVRLLQLVAAA--IQVKSEPAVRP---SGFRALLERIGRGVF 134

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
              +D+ S    LG +++  G       + +     ++      G+  +P+V   +F  G
Sbjct: 135 GLFSDAFSTMAFLGHLLTAVGRSIVDPRRIR--WAPIVALCERAGLDAMPIVATTTFFIG 192

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           AV+A  GA  L+ FGA+++S++L+ I  +RE  +L+TA+++AGRS S+  AEIGSMK+N+
Sbjct: 193 AVVALLGANMLTDFGAQVYSVELIGISVMREFNILITAILLAGRSASSFAAEIGSMKMNQ 252

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDA++ MG+D    L+ PR  AL++++P+LT +A  + + G  +V+W   D+    F  
Sbjct: 253 EIDAMQVMGVDPYEALVLPRFAALLLTIPILTFVATIAGLAGGILVVWIVLDLSPNFFLQ 312

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           R        + + GL KAP MA  I  +  ++G  VG    +LG++VT  VV +I  +I+
Sbjct: 313 RIVDYVGPTHFWIGLSKAPVMAAVIAAIGCRQGMEVGQDVEALGRRVTAAVVHAIFAIIL 372

Query: 360 IDSLFAIFYFAIGI 373
           ID++FA+ Y  + I
Sbjct: 373 IDAVFALIYMELDI 386


>gi|120554124|ref|YP_958475.1| hypothetical protein Maqu_1197 [Marinobacter aquaeolei VT8]
 gi|120323973|gb|ABM18288.1| protein of unknown function DUF140 [Marinobacter aquaeolei VT8]
          Length = 382

 Score =  182 bits (462), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 118/371 (31%), Positives = 193/371 (52%), Gaps = 8/371 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +E G    +F+G+W     S +         ++   +    D S +  +DT GA L++  
Sbjct: 19  AEFGGHTLKFSGDWTLSHYSVLNRQTTALKPRAAACNP---DFSGLGRLDTAGASLMVKL 75

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
           +        LQ      EQ  +LI      +  NQ        N        IGKK+   
Sbjct: 76  LGSDALISALQRAELPDEQR-ALIQAV--AEAMNQPSAAVATVNPVVAFLAEIGKKVTTL 132

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                  A  +G  +           +++  +   +  ++  G++ +P+V L++F+ GAV
Sbjct: 133 GQLVWLLAGFIGQTLGTLFYILPRPTRWR--ITPFVAALHDTGLNALPIVALLTFLVGAV 190

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A  GA  L  FGA I+++DL++   LRE GVLL A+++AGR+ SA  A+IG+MK+NEE+
Sbjct: 191 VAFLGATVLEDFGATIYTVDLVAFSFLREFGVLLAAILLAGRTASAFTAQIGAMKVNEEL 250

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DAIRT+GL+ V +L+ PR+ A++ SLP+LT +   S ++G ++V     DIP + F +  
Sbjct: 251 DAIRTLGLNPVELLVVPRVLAMMFSLPILTFIGMISGMVGGAVVCAVALDIPPSQFIAIV 310

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                L +   GL KAP  A  I ++   EGF V   + S+G+  T+ VVQSI +VI++D
Sbjct: 311 ERDIALKHFLVGLGKAPVFAFLIAVIGCLEGFKVAGSAQSVGEHTTSSVVQSIFMVILLD 370

Query: 362 SLFAIFYFAIG 372
           S+ A+F+  +G
Sbjct: 371 SVAALFFMEMG 381


>gi|167647526|ref|YP_001685189.1| hypothetical protein Caul_3564 [Caulobacter sp. K31]
 gi|167349956|gb|ABZ72691.1| protein of unknown function DUF140 [Caulobacter sp. K31]
          Length = 371

 Score =  182 bits (462), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 115/372 (30%), Positives = 197/372 (52%), Gaps = 15/372 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
              G      +G+W +  + +  + ++ A++ S   D+  +DL  ++  DT GA  I+  
Sbjct: 11  DHEGRKTVMLSGDWTARGMVDAGERLITALDGS---DAVDLDLRDLSRCDTAGAYAIIRA 67

Query: 62  MEKY--HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
            +     G IK    ++   +L  L+    + + +   PQ+ F     + L   IG+ + 
Sbjct: 68  ADGRVSAGHIK---ANSRTLRLLQLVGDAIQVEPEAAPPQKGF-----QALLERIGRGVY 119

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
              +D       LG ++   G   A   + +     ++      G+  +P+V + +F  G
Sbjct: 120 GLGDDLYGTLGFLGHLLVAIGRCIAKPSRIR--WAPVVALAERSGLDAIPIVAVTTFFIG 177

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           AV+A  GA  L+QFGA++F+++L+ I  LRE  +L+TA+++AGRS S+  AEIGSMK+N+
Sbjct: 178 AVVALLGANLLTQFGAQVFAVELIGISVLREFNILITAILLAGRSASSFAAEIGSMKMNQ 237

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDA++ MG+D    L+ PR  AL+I++PLLT +A  + + G  +V W   D+    F  
Sbjct: 238 EIDAMQVMGVDPYEALVLPRFAALLITIPLLTFIATLAGLAGGMLVTWAVLDLSPTFFLQ 297

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           R   +  + + + GL KAP MA  I  +  ++G  VG    SLG++VT  VV +I  +I 
Sbjct: 298 RMQDSVGVQHYWIGLSKAPVMAMVIAAIGCRQGMEVGNDVESLGRRVTAAVVHAIFAIIA 357

Query: 360 IDSLFAIFYFAI 371
           ID++FA+ Y  +
Sbjct: 358 IDAVFALIYMEL 369


>gi|206575650|ref|YP_002235755.1| putative ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|206570494|gb|ACI12140.1| putative ABC transporter, permease protein [Klebsiella pneumoniae
           342]
          Length = 382

 Score =  182 bits (461), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 121/363 (33%), Positives = 201/363 (55%), Gaps = 8/363 (2%)

Query: 12  AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM-EKYHGKIK 70
           +G+W     + + +  V A+   + S+ AI DLS +  +DT GA L++  M EK   +++
Sbjct: 25  SGDWVLAHYAYL-EPAVSALQPQLLSN-AIFDLSQLGTLDTAGATLLVKLMGEKKVLELE 82

Query: 71  LQGVSTHIEQLFSLISFTHRKKIKNQ-KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
               +  IE+   ++  T R  I+N   P           L  +IGK +  F  +  +  
Sbjct: 83  RIAPTLPIER--RVLLQTVRSAIQNYVTPPAQHQPGIVTELLANIGKSVESFWQNLVALI 140

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
             +GL +            ++  + SL+  +  +G++ VP++ L++F+ GAVIA  G+  
Sbjct: 141 GFIGLTMEALFATLLRPAHWR--VTSLVANLQQIGLNAVPIIALLTFMVGAVIAFLGSTV 198

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           LS FGA IF++ L++   LRE  VLL A+++AGR+ SA  A+IG MK NEEIDAI+TMGL
Sbjct: 199 LSTFGASIFTVQLVAFSFLREFAVLLAAILMAGRTASAFTAQIGLMKANEEIDAIQTMGL 258

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
           + V +L+ PR+ AL+++LP++T +     I+G  +V     DI   +F +   +     +
Sbjct: 259 NPVELLVLPRVLALLVALPMMTFIGMICGILGGIVVCALTLDISPTMFLTIMQNNVGFEH 318

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
            + G+IKAP  A  I I+   EGF V   + S+G+  T  VV SI +VI++D++ A+F+ 
Sbjct: 319 FWVGMIKAPVFAFLIAIIGCLEGFKVSGSAESVGEHTTASVVHSIFVVILLDAVAALFFM 378

Query: 370 AIG 372
            +G
Sbjct: 379 EMG 381


>gi|152992948|ref|YP_001358669.1| ABC transporter, permease [Sulfurovum sp. NBC37-1]
 gi|151424809|dbj|BAF72312.1| ABC transporter, permease [Sulfurovum sp. NBC37-1]
          Length = 367

 Score =  182 bits (461), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 124/363 (34%), Positives = 190/363 (52%), Gaps = 28/363 (7%)

Query: 13  GNWKSPEISEIADDVVMAINKSI-QSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK--I 69
           G W    + EI  ++     K I    S + DLS +   D+ G  L M + +K   K  +
Sbjct: 21  GEWTLATVPEIEKEL-----KGIPMGKSVLWDLSGVEAFDSAGVLLFMEYYDKLKQKNAV 75

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQR--SFFYNSFKNLHYHIGKKIVKFINDSCS 127
           +L G S   ++++ L+    RK +  + P+R  SFF          +GK  +  + D   
Sbjct: 76  ELVGYSESQKEMYDLL----RKHMIEKVPERKTSFFE--------ELGKSTLVVLGDIKD 123

Query: 128 QAHILGLVISNTGE--FCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
               LG +        F   + + K     ++  +++ G + + ++ L SF+ G VIA Q
Sbjct: 124 LITFLGHLFFTLFNVLFHPRNIRIK----EMVYHIHHSGFNALMIIGLTSFLVGMVIAYQ 179

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           GA QL++FGA+IF +D + I  +RE+G L+TA++IAGRSGSA  AEIG+MKI EEI A+R
Sbjct: 180 GAVQLAKFGADIFIVDTVGISMVRELGPLMTAIVIAGRSGSAYTAEIGAMKITEEIAAMR 239

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           TMG D    L+ PRI+ALI++LPLL   ++   I G  +      +I  A F  R +   
Sbjct: 240 TMGFDPYNFLVMPRIFALIVALPLLIFFSDIMGIFGGMVASQMELNISMAQFVDRLNEVL 299

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            + +   G+IK P  A  I  +    GF V  ++ SLG + T  VV SI +VI  D+LF+
Sbjct: 300 EVKHYILGMIKGPVFAFVIAAIGCFRGFQVSDNTESLGLQTTASVVNSIFLVIAFDALFS 359

Query: 366 IFY 368
           + Y
Sbjct: 360 VIY 362


>gi|16126557|ref|NP_421121.1| ABC transporter permease [Caulobacter crescentus CB15]
 gi|221235339|ref|YP_002517776.1| ABC transporter permease protein [Caulobacter crescentus NA1000]
 gi|13423841|gb|AAK24289.1| ABC transporter, permease protein, putative [Caulobacter crescentus
           CB15]
 gi|220964512|gb|ACL95868.1| ABC transporter permease protein [Caulobacter crescentus NA1000]
          Length = 371

 Score =  182 bits (461), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 195/379 (51%), Gaps = 25/379 (6%)

Query: 2   SENGITVFRFAGNWKS-------PEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG 54
            ++G  V   AG+W +       P ++E  +D      + ++      DL+ +   DT G
Sbjct: 11  EQDGGLVAVLAGDWTARGLFDAGPRLTEALED-----RRDLR-----FDLTGVNRCDTAG 60

Query: 55  AELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI 114
           A  I+        ++K   +    +Q+  L+       IK + PQR+     F  L   I
Sbjct: 61  AYAIL---RAAGDRLKSDRIIAR-KQVLRLLELVG-AAIKVE-PQRAARPTGFYALLERI 114

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
           G+ +     D       LG ++   G    S ++ +     ++      G+  +P++   
Sbjct: 115 GRGVFGLFADGYGTLVFLGHLLVALGRSIVSPHRIR--WAPIVALCERAGLDAMPIIATT 172

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           +F  GAV+A  GA  L+ FGA++++++L+ I  +RE  +L+TA+++AGRS S+  AEIGS
Sbjct: 173 TFFIGAVVALLGANMLTDFGAQVYAVELIGISVMREFNILITAILLAGRSASSFAAEIGS 232

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           MK+N+EIDA++ MG+D    L+ PR  AL++++PLLT +A  + + G  +V+W   D+  
Sbjct: 233 MKMNQEIDAMQVMGVDPYEALVLPRFAALLLTIPLLTFVATIAGLAGGILVVWSVLDLSP 292

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
             F  R        + + GL KAP MA  I  +  ++G  VG    SLG++VT  VV +I
Sbjct: 293 TFFLQRIVDYVGATHFWIGLSKAPVMAMVIAAIGCRQGMEVGKDIESLGRRVTAAVVHAI 352

Query: 355 SIVIIIDSLFAIFYFAIGI 373
             +I+ID++FA+ Y  + I
Sbjct: 353 FAIILIDAVFALIYMELDI 371


>gi|148925785|ref|ZP_01809473.1| putative ABC transport system permease protein [Campylobacter
           jejuni subsp. jejuni CG8486]
 gi|145845795|gb|EDK22886.1| putative ABC transport system permease protein [Campylobacter
           jejuni subsp. jejuni CG8486]
          Length = 369

 Score =  182 bits (461), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/379 (32%), Positives = 195/379 (51%), Gaps = 24/379 (6%)

Query: 7   TVFRFAGN-------WKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
           T F+F  N       W    I ++     +A+   IQS   I D   +  IDT G    +
Sbjct: 3   TNFKFQNNTLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFL 59

Query: 60  YF---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF--FYNSFKNLHYHI 114
                ++  + KI  + +++  + LF L    +++  K +K  ++F  ++     L   +
Sbjct: 60  ALENDLKDKNIKITKESLNSRFQILFELCEKNYQRLGKTKKSHKNFSEYFIDLGKLSLEL 119

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
            K ++KFIN + +    L L + N   F     +F  FL  +    +      +P+VIL 
Sbjct: 120 LKILIKFINFTGAFFTSLFLCLKNPKNF-----RFIAFLYHIENSAF----KALPIVILT 170

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           + + G V+A Q A+QL+QFGA IF +DLM I   RE+  L+ A++IAGRS S+  A+IG 
Sbjct: 171 ALLVGVVLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGV 230

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           MKI +EI A+ TMG      ++ PR+ AL+I++PL+  +++  +IIG  +V     DI F
Sbjct: 231 MKITDEIAAMNTMGFRSFEFIVIPRVMALVIAMPLIVAISDAISIIGGMMVAKLNLDISF 290

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
           A F  RF     + +IF GL KAP     IG++A   GF V   + S+G   T  VV +I
Sbjct: 291 AEFLRRFREAVDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAI 350

Query: 355 SIVIIIDSLFAIFYFAIGI 373
             VI  D+LF++   + GI
Sbjct: 351 FWVIAFDALFSVILTSTGI 369


>gi|285019443|ref|YP_003377154.1| ABC transporter permease [Xanthomonas albilineans GPE PC73]
 gi|283474661|emb|CBA17160.1| probable abc transporter permease protein [Xanthomonas albilineans]
          Length = 405

 Score =  182 bits (461), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 129/370 (34%), Positives = 208/370 (56%), Gaps = 27/370 (7%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA-ELIMYFMEKYHGK 68
           R  G+W +   + +A +V+    +S+ + +  +D S I ++D+ G  +LI Y       +
Sbjct: 55  RLTGSW-TLSTALVASEVL----RSMPAGTTGIDASGIAQLDSAGVLQLIRYATRNGIAQ 109

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN---SFKNLHYHI---GKKIVKFI 122
             L     H   L S I     + + + +P+R   Y    + + L Y +   GK+IV  +
Sbjct: 110 ESLDFRQDH-RALVSTI-----EDVADDRPKRKRDYGFAAALERLGYTVHRNGKEIVALV 163

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                    LG  +        +  +F+  L S +  M  VG+  VP+V L+S++ GAVI
Sbjct: 164 G-------FLGETLVKLMRLMHAPRRFR--LTSTVHHMEQVGLDAVPLVALLSYLVGAVI 214

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A  G+  L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EEID
Sbjct: 215 AFLGSTVLRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKAREEID 274

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           AI+T+GLD + +L+ PR+ AL++ LPLLT +A  + + G   V      IP  ++ +R H
Sbjct: 275 AIQTLGLDPMDLLVIPRLLALLLMLPLLTFVAMIAGLAGGVTVGAFDLGIPPQMYLARMH 334

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T  + ++  GL KAP  A AIG++   EG  V   + S+G++ T+ VVQ+IS+VIIID+
Sbjct: 335 DTIQIRHMLVGLAKAPIFAIAIGLIGCLEGLRVEGTAQSVGERTTSSVVQTISLVIIIDA 394

Query: 363 LFAIFYFAIG 372
           + A+++  +G
Sbjct: 395 IAALWFMKMG 404


>gi|85707661|ref|ZP_01038727.1| ABC-type transport system permease component [Erythrobacter sp.
           NAP1]
 gi|85689195|gb|EAQ29198.1| ABC-type transport system permease component [Erythrobacter sp.
           NAP1]
          Length = 370

 Score =  181 bits (459), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/331 (33%), Positives = 180/331 (54%), Gaps = 9/331 (2%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
           VDLS + E+DT+GA ++  F    H    + G +   ++L   +            P R+
Sbjct: 47  VDLSDVEEMDTVGAWVVCRF--ATHQSAAITGTTPSAKRLLEAVEAASSDV--EITPDRT 102

Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY 161
             +   + +   +G+K+    +         G ++   G        F   L + +RQM 
Sbjct: 103 PVW---ERVPLALGEKVYAARSGVYGVVGFFGQILIGFGSLLRHPSTFP--LKATVRQME 157

Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221
            VGV+ +P++ L+SF+ G VIAQQGA QL+QFGAE  +++L+  + LRE+GVL+TA+M+A
Sbjct: 158 MVGVAALPIIGLMSFLIGIVIAQQGAVQLAQFGAETLTVNLVGRITLRELGVLMTAIMVA 217

Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281
           GRSGSA  A+IG+MK+ EE+DA+RT+G+  +  L+ PRI A    + +L   A+   I+G
Sbjct: 218 GRSGSAFAAQIGTMKLTEEVDAMRTIGISPIERLVIPRILACTFMMVVLGFYASIVGIVG 277

Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341
            ++V      IPF  F  R      L +++ GL+KAP     + +     G  V  +S  
Sbjct: 278 GAVVGHLSLGIPFFTFLERIQEVVPLHDVWVGLVKAPVFGLIVALAGCYHGMQVKGNSEQ 337

Query: 342 LGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           +G + T  VV +I  VI++D+ FA+F+  IG
Sbjct: 338 VGIRTTMAVVSAIFAVIVLDAFFAVFFTEIG 368


>gi|86152962|ref|ZP_01071167.1| ABC transporter, permease [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85843847|gb|EAQ61057.1| ABC transporter, permease [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 369

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/379 (32%), Positives = 195/379 (51%), Gaps = 24/379 (6%)

Query: 7   TVFRFAGN-------WKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
           T F+F  N       W    I ++     +A+   IQS   I D   +  IDT G    +
Sbjct: 3   TNFKFQNNTLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFL 59

Query: 60  YF---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF--FYNSFKNLHYHI 114
                ++  + KI  +G+++  + LF L    +++  K +K  ++F  ++     L   +
Sbjct: 60  ALENDLKDKNIKITKEGLNSRFQILFELCEKNYQRLGKTKKSHKNFSEYFIDLGKLSLEL 119

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
            K ++KFIN + +    L L + N   F     +F  FL  +    +      +P+VIL 
Sbjct: 120 LKILIKFINFTGAFFTSLFLCLKNPKNF-----RFIAFLYHIENSAF----KALPIVILT 170

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           + + G V+A Q A+QL+QFGA IF +DLM I   RE+  L+ A++IAGRS S+  A+IG 
Sbjct: 171 ALLVGVVLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGV 230

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           MKI +EI A+ TMG      ++ PR+ AL++++PL+  +++  +IIG  ++     DI F
Sbjct: 231 MKITDEIAAMNTMGFRSFEFIVIPRVMALVVAMPLIVAISDAISIIGGMMIAKLNLDISF 290

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
             F  RF     + +IF GL KAP     IG++A   GF V   + S+G   T  VV +I
Sbjct: 291 VEFLRRFREAVDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAI 350

Query: 355 SIVIIIDSLFAIFYFAIGI 373
             VI  D+LF++   + GI
Sbjct: 351 FWVIAFDALFSVVLTSAGI 369


>gi|170724242|ref|YP_001751930.1| hypothetical protein PputW619_5085 [Pseudomonas putida W619]
 gi|169762245|gb|ACA75561.1| protein of unknown function DUF140 [Pseudomonas putida W619]
          Length = 377

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 127/368 (34%), Positives = 201/368 (54%), Gaps = 15/368 (4%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDS-AIVDLSAITEIDTIGAELIMYFM--EKY 65
            R AG+W     + +  D   +     Q D+ A+ DLS + ++DT GA L+   +  E+ 
Sbjct: 20  LRIAGDWTLAHYASLKRD---SERLRTQYDADAVADLSQLGQLDTAGASLLAELLGSERL 76

Query: 66  -HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
            H   +L   S  +  L ++        I  ++P+R         L   IG+ +     D
Sbjct: 77  SHCTQELPDASRAL--LKNVYCSVQDYCIPVKEPERHVLI----LLLERIGRAVNTLWQD 130

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           +      +GL++          ++++  L  ++  +   G+   P+V L++F+ GAV+A 
Sbjct: 131 TLQLLGFIGLILETLLRRALQPHRWR--LTPVVSHIEQTGLDAAPIVALLTFLVGAVVAF 188

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            GA  L+ FGA +F++DL++   LRE  VLLTA+++AGR+ SA  A+IGSMK NEEIDAI
Sbjct: 189 LGATVLADFGATVFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAI 248

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           RT+GL+ + +L+ PR+ AL+ISLPLLT +A    I+G ++V     DI  A+F S   S 
Sbjct: 249 RTLGLNPIELLVVPRVLALLISLPLLTFVAMICGIVGGAVVCALSLDISPAMFLSLLQSD 308

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             + +   GL KAPF A  I  +   EGF V   + S+G   T+ VVQSI +VI++D++ 
Sbjct: 309 IGVQHFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVLDAVA 368

Query: 365 AIFYFAIG 372
           A+F   +G
Sbjct: 369 ALFCMEMG 376


>gi|292490603|ref|YP_003526042.1| hypothetical protein Nhal_0469 [Nitrosococcus halophilus Nc4]
 gi|291579198|gb|ADE13655.1| protein of unknown function DUF140 [Nitrosococcus halophilus Nc4]
          Length = 380

 Score =  180 bits (457), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 199/383 (51%), Gaps = 34/383 (8%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI--VDLSAITEIDTIGAELIMY 60
           +   +  R  G W    IS++   + ++     QS   +  VD S IT++DT GA L+  
Sbjct: 20  DPATSTLRCLGTWTLYGISQLEQTLPLS-----QSHPPVHAVDASGITQMDTGGAWLLQR 74

Query: 61  FM---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
            +   E+    I  +G+    ++L  L+      +     P         +    H+ + 
Sbjct: 75  LLADLEQQTRPIPCKGLGQEQQKLLRLVQGGSTSQQLTTAPPPGILERIGRLSWAHVEEA 134

Query: 118 I--VKFINDSC-----SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170
           +  + FI ++      S AH              S  +++ FL +L       G++ +P+
Sbjct: 135 LSFLAFIGETLLYFLRSMAH-------------PSRIRWRPFLSNL----QTAGINALPI 177

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           V L+ F+ G V+A QG  QL  +GA IF ++L+++  +RE+  L+ A++IAGR+GSA  A
Sbjct: 178 VGLLIFLVGVVLAYQGGIQLRAYGANIFIVELVTLTMVRELAPLMAAIIIAGRTGSAFTA 237

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           +IG+M++ EEIDA+RT+G+  +  L+ P+I+AL+++LPLLT+ A+   I G  ++     
Sbjct: 238 QIGTMQVTEEIDALRTLGIPPMEQLVLPKIFALVLALPLLTVFADMVGIFGGMVMSQALL 297

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
           ++ F  F  R      L++   G+ KAP  A  I  V   +GF VG  + S+G+  TT V
Sbjct: 298 EVEFREFAQRIPEVVPLSSFLIGVGKAPVFAVIIATVGCYQGFRVGGGAESVGRHTTTSV 357

Query: 351 VQSISIVIIIDSLFAIFYFAIGI 373
           VQ+I +VII D+ F+I +  +GI
Sbjct: 358 VQAIFLVIIADATFSILFSWLGI 380


>gi|57168794|ref|ZP_00367925.1| conserved hypothetical integral membrane protein [Campylobacter
           coli RM2228]
 gi|57019841|gb|EAL56524.1| conserved hypothetical integral membrane protein [Campylobacter
           coli RM2228]
          Length = 371

 Score =  180 bits (457), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/371 (33%), Positives = 199/371 (53%), Gaps = 22/371 (5%)

Query: 2   SENGITVFRFAGNWKSPEISEIA-DDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM- 59
            EN + +F   G W    +S+I   D++  I+++    + I D S + EID  G    + 
Sbjct: 10  EENKVFIF---GIWDKTSVSKIKIKDLLSQISQT----NCIFDFSQLNEIDMAGVRFFLA 62

Query: 60  --YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF--FYNSFKNLHYHIG 115
             + ++K    I  QG++T  + LF L    +++  + Q+ + +F  F+ S   L + + 
Sbjct: 63  LEHDLKKNDILILKQGLNTRFKSLFELCEKNYQRINEKQEKKFNFTDFFISLGILSFDLL 122

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K + KFIN + +    L L I N       +++F  FL  +    +      +P+VIL +
Sbjct: 123 KILQKFINFTGTFFTSLFLCIKN-----PKNFRFISFLYHIENSAF----KALPIVILTA 173

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
            + G V+A Q A+QL+QFGA IF +DL+ I   RE+  L+ A++IAGRS S+  A+IG M
Sbjct: 174 LLVGVVLAYQAAYQLAQFGANIFIVDLVGISATRELAPLIAAIVIAGRSASSYTAQIGVM 233

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           KI +EI+A+ TMG      +I PR+ AL+I++PL+  L++  +I+G  +V     DI F 
Sbjct: 234 KITDEINAMNTMGFRSFEFIIIPRVMALVIAMPLIVALSDAISILGGMVVAKINLDISFG 293

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            F  RF     + +I  GL KAP     IG++A   GF V   + S+G   T  VV +I 
Sbjct: 294 EFLRRFREAVEMKHIIIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIF 353

Query: 356 IVIIIDSLFAI 366
            VI  D+LF++
Sbjct: 354 WVIAFDALFSV 364


>gi|305432464|ref|ZP_07401626.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Campylobacter coli JV20]
 gi|304444503|gb|EFM37154.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Campylobacter coli JV20]
          Length = 371

 Score =  180 bits (457), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 125/371 (33%), Positives = 198/371 (53%), Gaps = 22/371 (5%)

Query: 2   SENGITVFRFAGNWKSPEISEIA-DDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM- 59
            EN + +F   G W    +S+I   D++  I+++    + I D S + EID  G    + 
Sbjct: 10  EENKVFIF---GIWDKTSVSKIKIKDLLSQISQT----NCIFDFSQLNEIDMAGVRFFLA 62

Query: 60  --YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF--FYNSFKNLHYHIG 115
             + ++K    I  QG++T  + LF L    +++  + Q+ + +F  F+ S   L + + 
Sbjct: 63  LEHDLKKNDILILKQGLNTRFKSLFELCEKNYQRINEKQEKKFNFTDFFISLGILSFDLL 122

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K + KFIN + +    L L I N   F     +F  FL  +    +      +P+VIL +
Sbjct: 123 KILQKFINFTGAFFTSLFLCIKNPKNF-----RFISFLYHIENSAF----KALPIVILTA 173

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
            + G V+A Q A+QL+QFGA IF +DL+ I   RE+  L+ A++IAGRS S+  A+IG M
Sbjct: 174 LLVGVVLAYQAAYQLAQFGANIFIVDLVGISATRELAPLIAAIVIAGRSASSYTAQIGVM 233

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           KI +EI+A+ TMG      +I PR+ AL+I++PL+  L++  +I+G  +V     DI F 
Sbjct: 234 KITDEINAMNTMGFRSFEFIIIPRVMALVIAMPLIVALSDAISILGGMVVAKINLDISFG 293

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            F  RF     + +I  GL KAP     IG++A   GF V   + S+G   T  VV +I 
Sbjct: 294 EFLRRFREAVEMKHIIIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIF 353

Query: 356 IVIIIDSLFAI 366
            VI  D+LF++
Sbjct: 354 WVIAFDALFSV 364


>gi|283953736|ref|ZP_06371267.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 414]
 gi|283794777|gb|EFC33515.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 414]
          Length = 369

 Score =  180 bits (456), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 123/382 (32%), Positives = 196/382 (51%), Gaps = 30/382 (7%)

Query: 7   TVFRFAGN-------WKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
           T FRF  N       W    I ++     + +   IQS   I D   + +IDT G    +
Sbjct: 3   TDFRFQNNTFFIFGIWDKASIYKLKIKDFLTL---IQSKEVIFDFKDLEKIDTAGVRFFL 59

Query: 60  YF---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF--FYNSFKNLHYHI 114
                ++  + KI  QG+++    LF L    +++  K +K  ++F  ++ +   L   +
Sbjct: 60  ALENDLKNKNIKITKQGLNSRFLTLFELCEKNYQRLNKTKKSHKNFSEYFINLGKLSLEL 119

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---VPVV 171
            K + +FIN + +    L L + N   F             LI  +Y++  S    +P+V
Sbjct: 120 LKILREFINFTGAFFTSLFLCLKNPKNF------------RLIAFLYHIENSAFKALPIV 167

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
           IL + + G V+A Q A+QL+QFGA IF +DLM I   RE+  L+ A++IAGRS S+  A+
Sbjct: 168 ILTALLVGVVLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQ 227

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           IG MKI +EI A+ TMG      +I PR+ AL++++PL+  +++  +I+G  ++     D
Sbjct: 228 IGVMKITDEIAAMNTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISIVGGMMIAKLNLD 287

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
           I FA F  RF     + +I  GL+KAP     IG++A   GF V   + S+G   T  VV
Sbjct: 288 ISFAEFLRRFREAVDIKHILIGLVKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVV 347

Query: 352 QSISIVIIIDSLFAIFYFAIGI 373
            +I  VI  D+LF++   + GI
Sbjct: 348 NAIFWVIAFDALFSVVLTSAGI 369


>gi|255322244|ref|ZP_05363390.1| ABC transport system permease [Campylobacter showae RM3277]
 gi|255300617|gb|EET79888.1| ABC transport system permease [Campylobacter showae RM3277]
          Length = 378

 Score =  180 bits (456), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 121/373 (32%), Positives = 194/373 (52%), Gaps = 33/373 (8%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK-- 70
            NW     ++I       I  S + +  +++   I E+D   A   ++F   +    K  
Sbjct: 27  NNWNYKLPAQIWTQTAALIG-SKKFNKIVLNFKEIKELDYAAA---LFFKNTFLNACKNY 82

Query: 71  -LQGVSTHIEQLFSLISFTHRKKIK---NQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
            L  ++ H +++F+ I+     KIK   + KP         +N    IGK +  F    C
Sbjct: 83  ELVNLTPHAQKIFASINSEINPKIKQIIDAKPH--------ENPFSQIGKNLTAFFAGFC 134

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIR----QMYY--VGVSGVPVVILISFVTGA 180
           +        ++ TGEF     K   F+L  IR      Y+   G+  V +V L SF+ G 
Sbjct: 135 A-------FLNFTGEFLVKFSKI--FMLKNIRVKEILAYFEDAGIKSVFIVCLTSFLIGI 185

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A QG+  L  FGA I  +++M +L LREI  L+ A+++AGR  S+  A+IG MKI EE
Sbjct: 186 VLAYQGSNLLESFGATIIIVEMMGLLTLREIAPLIAAIIVAGRLASSFTAQIGVMKITEE 245

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA++TMG D  + L+ PR+ ALI+++PL+  LA+ + I G  +V+  Y +I F  + +R
Sbjct: 246 IDAMKTMGFDPFKFLVLPRVIALIVAMPLIVFLADVAGIFGEMVVMENYLNISFDSYLAR 305

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
           F     + +++ GL KAPF    I  +    GF +G ++ S+G   T  VV +I  VI++
Sbjct: 306 FSQEVDIKHLYVGLFKAPFFGIVIAFIGCMRGFQIGGNTQSVGTYTTVSVVNAIFGVIMV 365

Query: 361 DSLFAIFYFAIGI 373
           D+LF+I +  +GI
Sbjct: 366 DALFSIIFTQLGI 378


>gi|302382565|ref|YP_003818388.1| hypothetical protein Bresu_1453 [Brevundimonas subvibrioides ATCC
           15264]
 gi|302193193|gb|ADL00765.1| protein of unknown function DUF140 [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 372

 Score =  179 bits (453), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 115/374 (30%), Positives = 198/374 (52%), Gaps = 14/374 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAIN-KSIQSDSAIVDLSAITEIDTIGAELIMY 60
           +  G +V R  G+W +  +   A  +   ++ ++IQS    VDLS +   DT GA  ++ 
Sbjct: 11  ATGGGSVLRLTGDWTTMSLGRTAARLSDGLSGRTIQS----VDLSGLGRFDTAGALALVQ 66

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
                  K   Q       +++ ++    RK +   + Q S     F  + + +     +
Sbjct: 67  ASGLTLPKDAWQS-RPEAGRIYDMVETLERKSMPAPRRQASL-TRIFARMGHGVHDAAAE 124

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           F+    S A  LG +++ TG         +    + + Q    G+  +P++ + +F  GA
Sbjct: 125 FL---LSMA-FLGRLMAATGNAVRHPGAIR--WPAWVSQAERSGLDAMPIIAVTNFFIGA 178

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           VIA  GA  L+QFGA +F++DL+ +  LRE+ VL+TA+++AGRS S+  AE+GSM++N+E
Sbjct: 179 VIAFLGADLLTQFGAGVFAVDLIGVSILRELAVLITAILLAGRSASSFAAEVGSMRMNQE 238

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +DA++ MG+D  + L+ PR+ A+++ +PLLT +   + + G  IV W    +  A F  R
Sbjct: 239 VDAMQVMGVDPFQALVIPRLAAMLVMVPLLTFVGMIAGLFGGLIVTWSQLALGPAFFLQR 298

Query: 301 FHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
              T  +  ++  GL KAP  A  I  +  ++G AV     SLG++VT  VVQ+I  +I 
Sbjct: 299 MVDTPDMFTHMLVGLSKAPVFAIVIAAIGCRQGLAVSGDVESLGRRVTAAVVQAIFAIIF 358

Query: 360 IDSLFAIFYFAIGI 373
           +D++FA+ Y  + I
Sbjct: 359 LDAVFALIYLELDI 372


>gi|154706662|ref|YP_001424136.1| ABC transporter permease protein [Coxiella burnetii Dugway
           5J108-111]
 gi|154355948|gb|ABS77410.1| ABC transporter permease protein [Coxiella burnetii Dugway
           5J108-111]
          Length = 377

 Score =  179 bits (453), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 189/368 (51%), Gaps = 21/368 (5%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME--KYHGK-I 69
           G+W    +S + D + +   K   S+  I+    IT++D+ GA L    +   K  GK I
Sbjct: 24  GDWTVSHLSPLEDQLPLCAEK--LSEKVIIHADKITKMDSAGALLFYTLINHLKSLGKAI 81

Query: 70  KLQGVSTHIEQLFSLI----SFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
           ++ G+S + + L  LI     F  +    ++ P   +    +    + +    + F+ + 
Sbjct: 82  EITGLSENAQSLLKLIGNESKFLRQPLPSSKTPGVVYLLGEWAVTKWRVLIDFLTFVGEV 141

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            + A          G       +++  L    R +   G   +P+V L+SF+ G V+  Q
Sbjct: 142 ATTA--------GQGILKPQRIQWRAIL----RAIEETGYQALPIVALLSFLVGVVLTYQ 189

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            A QL  + A+IF +D+     LRE G L+TA++ AGR+ +A  A+IG+MK+NEEIDA+ 
Sbjct: 190 IALQLDSYNADIFVVDITGAAILREFGPLITAIIAAGRTSTAFTAQIGTMKVNEEIDALN 249

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           TMG+  +  L+ P+I ALIISL LLT+ A+     G+ I+     DI +  F  RFH   
Sbjct: 250 TMGVVPIEHLVLPKIIALIISLTLLTVWADIFGTFGSMIMAKSQLDIGYLAFLDRFHHAI 309

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            + +   GLIKAP     I  V   +GF VG  ++S+G+K T   VQSI ++II D++F+
Sbjct: 310 AVRHYIAGLIKAPVFGLIIATVGCFQGFQVGASADSVGQKTTQSAVQSIFLIIIADAIFS 369

Query: 366 IFYFAIGI 373
           + +   GI
Sbjct: 370 VIFSLRGI 377


>gi|126666401|ref|ZP_01737380.1| ABC transporter, permease protein, putative [Marinobacter sp.
           ELB17]
 gi|126629202|gb|EAZ99820.1| ABC transporter, permease protein, putative [Marinobacter sp.
           ELB17]
          Length = 387

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 196/364 (53%), Gaps = 12/364 (3%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKL- 71
           G+W  P    +   V  A   S +  +  ++L  +  IDT GA L+   +  ++ +  L 
Sbjct: 31  GDWTLPYYHALYSSVTAAGQDSDRYQT--LNLQTLGRIDTAGAALLAELVGPHNLEQWLA 88

Query: 72  ---QGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
              Q VS     L S ++      + +Q+P  +    +   L   +G  + +      + 
Sbjct: 89  DNPQAVSRETAALLSAVA----TAMADQQPLPAPPGFTLSGLVRDVGAWVNELYQLVVTL 144

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G +I+          +++  + + +  +   G++ VP+V L++F+ GAV+A  GA 
Sbjct: 145 IGFIGQIIAALAWTTLHPRRWR--MTAFVAAVQDTGLNAVPIVALLTFLVGAVVAFLGAT 202

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L+ FGA I++++L++   LRE GVLL A+++AGR+ S+  A+IG+MK+NEE+DA+RT+G
Sbjct: 203 VLADFGATIYTVNLVAFSFLREFGVLLAAILLAGRTASSFTAQIGAMKVNEELDALRTLG 262

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           L  + +L+ PR+ A+++SLPLLT +   S ++G ++V     DI    F S       L 
Sbjct: 263 LSPIELLVLPRVLAMMVSLPLLTFVGMISGMVGGALVCSMTLDITPTQFISIVSQDVALK 322

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           ++  GL KAP  A  I  VA  EGF V   + S+G   T+ VVQSI +VI+ DS+ A+F+
Sbjct: 323 HLLVGLSKAPIFAFLIAAVACLEGFKVSGSAQSVGVHTTSSVVQSIFMVILFDSIAALFF 382

Query: 369 FAIG 372
             +G
Sbjct: 383 MEMG 386


>gi|29654061|ref|NP_819753.1| ABC transporter permease [Coxiella burnetii RSA 493]
 gi|161830426|ref|YP_001596961.1| ABC transporter, permease protein [Coxiella burnetii RSA 331]
 gi|165924016|ref|ZP_02219848.1| ABC transporter, permease protein [Coxiella burnetii RSA 334]
 gi|212212807|ref|YP_002303743.1| ABC transporter permease protein [Coxiella burnetii CbuG_Q212]
 gi|29541327|gb|AAO90267.1| ABC transporter permease protein [Coxiella burnetii RSA 493]
 gi|161762293|gb|ABX77935.1| ABC transporter, permease protein [Coxiella burnetii RSA 331]
 gi|165916539|gb|EDR35143.1| ABC transporter, permease protein [Coxiella burnetii RSA 334]
 gi|212011217|gb|ACJ18598.1| ABC transporter permease protein [Coxiella burnetii CbuG_Q212]
          Length = 377

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 189/368 (51%), Gaps = 21/368 (5%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME--KYHGK-I 69
           G+W    +S + D + +   K   S+  I+    IT++D+ GA L    +   K  GK I
Sbjct: 24  GDWTVSHLSPLEDQLPLYAEK--LSEKVIIHADKITKMDSAGALLFYTLINHLKSLGKAI 81

Query: 70  KLQGVSTHIEQLFSLI----SFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
           ++ G+S + + L  LI     F  +    ++ P   +    +    + +    + F+ + 
Sbjct: 82  EITGLSENAQSLLKLIGNESKFLRQPLPSSKTPGVVYLLGEWAVTKWRVLIDFLTFVGEV 141

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            + A          G       +++  L    R +   G   +P+V L+SF+ G V+  Q
Sbjct: 142 ATTA--------GQGILKPQRIQWRAIL----RAIEETGYQALPIVALLSFLVGVVLTYQ 189

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            A QL  + A+IF +D+     LRE G L+TA++ AGR+ +A  A+IG+MK+NEEIDA+ 
Sbjct: 190 IALQLDSYNADIFVVDITGAAILREFGPLITAIIAAGRTSTAFTAQIGTMKVNEEIDALN 249

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           TMG+  +  L+ P+I ALIISL LLT+ A+     G+ I+     DI +  F  RFH   
Sbjct: 250 TMGVVPIEHLVLPKIIALIISLTLLTVWADIFGTFGSMIMAKSQLDIGYLAFLDRFHHAI 309

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            + +   GLIKAP     I  V   +GF VG  ++S+G+K T   VQSI ++II D++F+
Sbjct: 310 AVRHYIAGLIKAPVFGLIIATVGCFQGFQVGASADSVGQKTTQSAVQSIFLIIIADAIFS 369

Query: 366 IFYFAIGI 373
           + +   GI
Sbjct: 370 VIFSLRGI 377


>gi|254450464|ref|ZP_05063901.1| ABC transporter, inner membrane subunit [Octadecabacter antarcticus
           238]
 gi|198264870|gb|EDY89140.1| ABC transporter, inner membrane subunit [Octadecabacter antarcticus
           238]
          Length = 376

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 93/220 (42%), Positives = 145/220 (65%)

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           L +L+     VG   VP+V L++F+ G V+A QG+ QL QFGAE+F +DL+++  LRE+G
Sbjct: 156 LTALVHHCQEVGFKAVPIVALMAFLIGVVLAFQGSTQLKQFGAEVFIVDLIAVSILRELG 215

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
           +LLT++++AGR+ SA  A IGSMK+ EEIDA+R++GLD    L  PRI AL++ LP+L +
Sbjct: 216 ILLTSIIVAGRTASAFTAAIGSMKMREEIDAMRSLGLDPAATLFVPRILALVLMLPILGL 275

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           +AN   + G +I+ W    I   +F +R  +   ++++  G+IKAP  A  IG+V    G
Sbjct: 276 IANVMGLFGGAIMAWIDLGISPEMFMTRLVNGTDVSHLAAGMIKAPVFALIIGVVGCHAG 335

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
             V  ++ SLG+  ++ VV +I  VI+ D++F+IF+  IG
Sbjct: 336 MQVQSNAESLGRMTSSSVVAAIFAVIMADAVFSIFFAQIG 375


>gi|268678744|ref|YP_003303175.1| hypothetical protein Sdel_0102 [Sulfurospirillum deleyianum DSM
           6946]
 gi|268616775|gb|ACZ11140.1| protein of unknown function DUF140 [Sulfurospirillum deleyianum DSM
           6946]
          Length = 376

 Score =  177 bits (448), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/334 (33%), Positives = 180/334 (53%), Gaps = 22/334 (6%)

Query: 43  DLSAITEIDTIGAELIMYF---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
           D S+I   DT G  L+++    +EK +  ++  G S   + LFS+    +  ++   K +
Sbjct: 50  DFSSIETFDTHGIMLLLHHIKKLEKEYCIVQTTGASDAFKTLFSICQTHYPHEVPRPKKE 109

Query: 100 R---SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156
           R   SF  N  + +     K +  F + +   +H +G +             FK   + L
Sbjct: 110 RMVLSFLENVGRTMMEGY-KTLASFFSFTGELSHAIGALF------------FKPANIRL 156

Query: 157 IRQMYYVGVSG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
              +Y++  SG   +P+++L SF+ G VIA QGA QL +FGA IF +++++I  +RE+  
Sbjct: 157 KATLYHIEQSGAGAIPIILLTSFLIGVVIAYQGASQLEKFGANIFIVEMITISAVRELAP 216

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           LLTA+++AGRS S+  A+IG MK+ +EIDA+ +MG      L+ PR++ALIISLPLL   
Sbjct: 217 LLTAIVVAGRSASSYTAQIGVMKLTDEIDAMSSMGFSPWNFLVLPRLFALIISLPLLVFF 276

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
           A+  +  G  ++     D+ F  F  R   T  L ++  GL+KAP   C I  +    GF
Sbjct: 277 ADVVSTFGGMVIASTRLDVSFVEFIDRIKETVALKHLVIGLVKAPIFGCIIATIGCFRGF 336

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +  ++ S+GK  T  VV +I  VI +D+L ++F
Sbjct: 337 QITSNTESVGKYTTISVVNAIFWVIAMDALISVF 370


>gi|226942634|ref|YP_002797707.1| ABC transporter protein [Azotobacter vinelandii DJ]
 gi|226717561|gb|ACO76732.1| ABC transporter protein [Azotobacter vinelandii DJ]
          Length = 382

 Score =  177 bits (448), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 193/368 (52%), Gaps = 20/368 (5%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72
           G+W       +  ++  A  +    D+  V L  +  +DT GA L++  +    G  +L 
Sbjct: 26  GDWTLQHYPRLKREIERA--RPRLDDACPVVLDGLGALDTAGAGLLVELL----GARRLT 79

Query: 73  GVSTHIEQLFSLISFTHRKKIK--------NQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
            ++    QL +      R             ++P+RS    + K+   HIG+ +      
Sbjct: 80  DIARWAPQLPAERQALLRTVAMAVAGAAGTEEEPERS----TLKDELAHIGRVVETLWEQ 135

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +    +GL +S          +++  +  L+  +   G+  VP+V L++F+ GAV+A 
Sbjct: 136 QRTLYGFIGLTLSTLLATLPRPRRWR--ITPLVAHIERTGLDAVPIVALLTFMVGAVVAF 193

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            GA  L QFGA I++++L++   LRE GVLL A+++AGR+ SA  A+IG+MK NEEIDAI
Sbjct: 194 LGATVLGQFGATIYTVNLVAYSFLREFGVLLCAILMAGRTASAFAAQIGAMKANEEIDAI 253

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R +GLD + +L+ PR+ A++++LP+LT +A    I+G   V     DI    +F+     
Sbjct: 254 RALGLDPIELLVLPRVLAMLLTLPILTFIAMLCGILGGLAVCVLALDISPVQYFAILEQE 313

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             + +   GL KAP  A  I ++   EGF     + S+G++ T+ VVQSI +VI+ID+L 
Sbjct: 314 IPVNHYLVGLGKAPLFAFLIAVIGCLEGFKASGSAQSVGERTTSSVVQSIFMVILIDALA 373

Query: 365 AIFYFAIG 372
           A+F   +G
Sbjct: 374 ALFLMEMG 381


>gi|238796784|ref|ZP_04640289.1| ABC transporter, permease protein [Yersinia mollaretii ATCC 43969]
 gi|238719272|gb|EEQ11083.1| ABC transporter, permease protein [Yersinia mollaretii ATCC 43969]
          Length = 381

 Score =  177 bits (448), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/286 (38%), Positives = 166/286 (58%), Gaps = 3/286 (1%)

Query: 88  THRKKIKNQKPQRSFFYNSF-KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASS 146
           T  + + +  P+ S     F   L  +IG+ +V    D  S    +GL +          
Sbjct: 97  TVSRVLPDLSPEPSTKAPPFWLELLSNIGRSMVNLWEDIKSLLGFIGLTLEALLGTLFRP 156

Query: 147 YKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206
            +++  + SLI  +  +G++ VP+++L++F+ GAVIA  GA  L+ FGA IF++DL+   
Sbjct: 157 ARWR--MTSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTTFGAGIFTVDLVVFS 214

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            LRE  VLLTA+++AGR+ SA  AEIG MK NEEIDAI+T+GL+ V +L+ PR+ AL+IS
Sbjct: 215 FLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPVELLVLPRVLALLIS 274

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326
           LP+LT +     I G  +V     DI   +F S   ++  L +   G+ KAP  A  I I
Sbjct: 275 LPMLTFIGMVCGIFGGMVVCALTLDISPTMFLSIMQNSNGLQHFLVGISKAPIFAFLIAI 334

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           +   EGF V   + S+G   TT VV SI +VI++D++ A+F+  +G
Sbjct: 335 IGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEMG 380


>gi|238754554|ref|ZP_04615908.1| ABC transporter, permease protein [Yersinia ruckeri ATCC 29473]
 gi|238707185|gb|EEP99548.1| ABC transporter, permease protein [Yersinia ruckeri ATCC 29473]
          Length = 343

 Score =  176 bits (446), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 121/340 (35%), Positives = 184/340 (54%), Gaps = 22/340 (6%)

Query: 43  DLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHR-------KKIKN 95
           DLS +  +DT GA L+   +    G  ++    +H+ +L  L+    R       + + N
Sbjct: 15  DLSQLGRLDTAGATLLATLL----GGERI----SHLRELAPLLPDERRILLETVSQVLPN 66

Query: 96  QKPQRSFFYNSFK-NLHYHIGKKIVKFINDSCSQAHILGLVISNT--GEFCASSYKFKGF 152
              Q +     F   L   IG+ +     D  S     GL +       F  S ++    
Sbjct: 67  LASQPTVKPPPFWIGLLVPIGQSVDNLWQDFKSLLGFTGLTLEALFGTVFRPSRWRMT-- 124

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
             SLI  +  +G++ VP+++L++F+ GAVIA  GA  L+ FGA IF++DL+    LRE  
Sbjct: 125 --SLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTTFGAGIFTVDLVVFSFLREFA 182

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
           VLLTA+++AGR+ SA  AEIG MK NEEIDAI+T+GL+ V +L+ PR+ AL+ISLP+LT 
Sbjct: 183 VLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPVELLVLPRVLALLISLPMLTF 242

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           +     I G  +V     +I   +F S   ++  L +   G+ KAP  A  I I+   EG
Sbjct: 243 IGMVCGIFGGMVVCALALNISPTMFLSIMQNSNGLQHFLVGISKAPIFAFLIAIIGCLEG 302

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           F V   + S+G   TT VV SI +VI++D++ A+F+  +G
Sbjct: 303 FKVSGSAESVGIHTTTSVVHSIFVVILLDAVAALFFMEMG 342


>gi|153209306|ref|ZP_01947341.1| ABC transporter, permease protein [Coxiella burnetii 'MSU Goat
           Q177']
 gi|212219048|ref|YP_002305835.1| ABC transporter permease protein [Coxiella burnetii CbuK_Q154]
 gi|120575422|gb|EAX32046.1| ABC transporter, permease protein [Coxiella burnetii 'MSU Goat
           Q177']
 gi|212013310|gb|ACJ20690.1| ABC transporter permease protein [Coxiella burnetii CbuK_Q154]
          Length = 377

 Score =  176 bits (445), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 188/368 (51%), Gaps = 21/368 (5%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME--KYHGK-I 69
           G+W    +S + D + +   K   S+  I+    I ++D+ GA L    +   K  GK I
Sbjct: 24  GDWTVSHLSPLEDQLPLYAEK--LSEKVIIHADKIIKMDSAGALLFYTLINHLKSLGKAI 81

Query: 70  KLQGVSTHIEQLFSLI----SFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
           ++ G+S + + L  LI     F  +    ++ P   +    +    + +    + F+ + 
Sbjct: 82  EITGLSENAQSLLKLIGNESKFLRQPLPSSKTPGVVYLLGEWAVTKWRVLIDFLTFVGEV 141

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            + A          G       +++  L    R +   G   +P+V L+SF+ G V+  Q
Sbjct: 142 ATTA--------GQGILKPQRIQWRAIL----RAIEETGYQALPIVALLSFLVGVVLTYQ 189

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            A QL  + A+IF +D+     LRE G L+TA++ AGR+ +A  A+IG+MK+NEEIDA+ 
Sbjct: 190 IALQLDSYNADIFVVDITGAAILREFGPLITAIIAAGRTSTAFTAQIGTMKVNEEIDALN 249

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           TMG+  +  L+ P+I ALIISL LLT+ A+     G+ I+     DI +  F  RFH   
Sbjct: 250 TMGVVPIEHLVLPKIIALIISLTLLTVWADIFGTFGSMIMAKSQLDIGYLAFLDRFHHAI 309

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            + +   GLIKAP     I  V   +GF VG  ++S+G+K T   VQSI ++II D++F+
Sbjct: 310 AVRHYIAGLIKAPVFGLIIATVGCFQGFQVGASADSVGQKTTQSAVQSIFLIIIADAIFS 369

Query: 366 IFYFAIGI 373
           + +   GI
Sbjct: 370 VIFSLRGI 377


>gi|327478710|gb|AEA82020.1| ABC transporter permease [Pseudomonas stutzeri DSM 4166]
          Length = 385

 Score =  175 bits (444), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 118/367 (32%), Positives = 193/367 (52%), Gaps = 13/367 (3%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           R  G+W     + +  +V   +   I   S I +LS +  +DT GA L++  +    G  
Sbjct: 27  RIVGDWTLAHYAALRREV-QRLRARIDERSQI-ELSGLGALDTAGAGLLVELL----GPE 80

Query: 70  KLQGVSTHIEQL----FSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
           ++  +     QL     +L+  T    +       S     F  +  HIG+ +       
Sbjct: 81  RIAAIEAWAPQLPAERLALLR-TVATALDQPDAAESPRGYEFGYVLAHIGRTVAAVWKQQ 139

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            +    +GL +           +++  L SL   +   G+  VP+V L++F+ GAV+A  
Sbjct: 140 RALLGFIGLTLQTLLLTLPRPRRWR--LTSLAVHIEQTGLDAVPIVALLTFLVGAVVAFL 197

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           GA  L+ FGA I++++L+    LRE GVLL A+++AGRS SA  A+IGSMK NEE+DAIR
Sbjct: 198 GATVLADFGATIYTVNLVGFSFLREFGVLLAAILLAGRSASAFAAQIGSMKSNEEVDAIR 257

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           T+GL  + +L+ PR+ A++I+LP+LT +   S I G  +V     DI   +FF+      
Sbjct: 258 TLGLSPIELLVLPRVLAMLITLPILTFVGMLSGIAGGLVVCVLALDISPTMFFNIMARDI 317

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            +++   GL KAP  A  I ++   EGF V   + S+G+  T+ VVQ+I +VI++D++ A
Sbjct: 318 AVSHFLVGLGKAPVFAFVIAVIGCLEGFKVSGSAQSVGEHTTSSVVQAIFMVILLDAIAA 377

Query: 366 IFYFAIG 372
           +F+  +G
Sbjct: 378 LFFMEMG 384


>gi|167031179|ref|YP_001666410.1| hypothetical protein PputGB1_0158 [Pseudomonas putida GB-1]
 gi|166857667|gb|ABY96074.1| protein of unknown function DUF140 [Pseudomonas putida GB-1]
          Length = 377

 Score =  175 bits (444), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 122/369 (33%), Positives = 198/369 (53%), Gaps = 17/369 (4%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R  G+W     + +  +    +     +D+ + DLS +  +DT GA L+   +    G 
Sbjct: 20  LRITGDWTLAHYANLKRESEQ-LRTQYAADT-VADLSQLGRLDTAGASLLAELL----GS 73

Query: 69  IKLQGVSTHIEQ-----LFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
            +L   +  + +     L ++        I  ++P+R    N    L   IG+ +     
Sbjct: 74  ERLSRCTQDLPEASRALLKNVYCSVQDYCIPVKEPER----NVLLMLLERIGRAVGTLWQ 129

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
           DS      +G+++          ++++     ++  +   G+   P+V L++F+ GAV+A
Sbjct: 130 DSMQLLGFVGVILETLLRRALQPHRWR--FTPVVAHIEQTGLDAAPIVALLTFLVGAVVA 187

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
             GA  L+ FGA IF++DL++   LRE  VLLTA+++AGR+ SA  A+IGSMK NEEIDA
Sbjct: 188 FLGATVLADFGATIFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDA 247

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           IRT+GL+ + +L+ PR+ AL+ISLPLLT +A    +IG ++V     DI  A+F S   S
Sbjct: 248 IRTLGLNPMELLVVPRVLALLISLPLLTFVAMICGMIGGAVVCALTLDISPAMFLSLLQS 307

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              + +   GL KAPF A  I  +   EGF V   + S+G   T+ VVQSI +VI++D++
Sbjct: 308 DIGVQHFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVIVLDAV 367

Query: 364 FAIFYFAIG 372
            A+F+  +G
Sbjct: 368 AALFFMEMG 376


>gi|146280488|ref|YP_001170641.1| ABC transporter permease [Pseudomonas stutzeri A1501]
 gi|145568693|gb|ABP77799.1| probable permease of ABC transporter [Pseudomonas stutzeri A1501]
          Length = 362

 Score =  175 bits (444), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 119/367 (32%), Positives = 192/367 (52%), Gaps = 13/367 (3%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           R  G+W     + +  +V   +   I   S I +LS +  +DT GA L+   +    G  
Sbjct: 4   RIVGDWTLAHYAALRREV-QRLRARIDERSQI-ELSGLGALDTAGAGLLAELL----GPE 57

Query: 70  KLQGVSTHIEQL----FSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
           ++  +     QL     +L+  T    +       S     F  +  HIG+ +       
Sbjct: 58  RIAAIEAWAPQLPAERLALLR-TVATALDQPDAAESPRGYEFGYVLAHIGRTVAAVWKQQ 116

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            +    +GL +           +++  L SL   +   G+  VP+V L++F+ GAV+A  
Sbjct: 117 RALLGFIGLTLQTLLLTLPRPRRWR--LTSLAVHIEQTGLDAVPIVALLTFLVGAVVAFL 174

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           GA  L+ FGA I++++L+    LRE GVLL A+++AGRS SA  A+IGSMK NEEIDAIR
Sbjct: 175 GATVLADFGATIYTVNLVGFSFLREFGVLLAAILLAGRSASAFAAQIGSMKSNEEIDAIR 234

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           T+GL  + +L+ PR+ A++I+LP+LT +   S I G  +V     DI   +FF+      
Sbjct: 235 TLGLSPIELLVLPRVLAMLITLPILTFVGMLSGIAGGLVVCVLALDISPTMFFNIMARDI 294

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            +++   GL KAP  A  I ++   EGF V   + S+G+  T+ VVQ+I +VI++D++ A
Sbjct: 295 AVSHFLVGLGKAPVFAFVIAVIGCLEGFKVTGSAQSVGEHTTSSVVQAIFMVILLDAIAA 354

Query: 366 IFYFAIG 372
           +F+  +G
Sbjct: 355 LFFMEMG 361


>gi|300917987|ref|ZP_07134613.1| conserved hypothetical protein [Escherichia coli MS 115-1]
 gi|300414813|gb|EFJ98123.1| conserved hypothetical protein [Escherichia coli MS 115-1]
          Length = 381

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/280 (38%), Positives = 162/280 (57%), Gaps = 11/280 (3%)

Query: 95  NQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNT--GEFCASSYKFKGF 152
           ++KP R F+     N     G+ +     D  S    +GL +       F  S ++    
Sbjct: 110 SEKPTR-FWLEMLAN----TGRSVDNLWQDIKSLLGFIGLALETLLGTLFRPSRWRIT-- 162

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
             SLI  +  +G++ VP+++L++F+ GAVIA  GA  L+ FGA IF++DL+    LRE  
Sbjct: 163 --SLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTTFGAGIFTVDLVVFSFLREFA 220

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
           VLLTA+++AGR+ SA  AEIG MK NEEIDAI+T+GL+ V +L+ PR+ AL+ISLP+LT 
Sbjct: 221 VLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPVELLVLPRVLALLISLPMLTF 280

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           +     I G  +V     DI   +F S   ++  L +   G+ KAP  A  I I+   EG
Sbjct: 281 IGMVCGIFGGMVVCALTLDISPTMFLSIMQNSNGLQHFLVGISKAPIFAFLIAIIGCLEG 340

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           F V   + S+G   TT VV SI +VI++D++ A+F+  +G
Sbjct: 341 FKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEMG 380


>gi|119945392|ref|YP_943072.1| hypothetical protein Ping_1681 [Psychromonas ingrahamii 37]
 gi|119863996|gb|ABM03473.1| hypothetical protein DUF140 [Psychromonas ingrahamii 37]
          Length = 383

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/384 (30%), Positives = 200/384 (52%), Gaps = 28/384 (7%)

Query: 2   SENGITVFRFAGNWKSPEISEI----ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAEL 57
           + +G  +FR  G+W +  +  +      +  +  N S+Q D     +S + ++D+ G  L
Sbjct: 16  NNSGSILFRCQGDWTAKALQNVLRYLEKEAGILFNMSVQWD-----VSGVGKVDSAGIML 70

Query: 58  IMYF---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI 114
            +++   ++  H  ++L G  +  + L+ L+    R  +  Q   +    +       +I
Sbjct: 71  YIHYHDLLKLQHCTVELTGARSEYQNLYQLL----RSHVSQQAVSKPGLLSRLLLPFTNI 126

Query: 115 GK---KIVKFINDSCS--QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           GK    + + IND  +    H   L+ S       SS ++     S+++ +   GV  +P
Sbjct: 127 GKSTENLWRDINDFLTFIGEHSAALLTSLRH---PSSIRYA----SIVKNIEEAGVRALP 179

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +V L S + G VI  Q A QL +FGA IF +D++ I   RE+  L+TA+++AGR+GS+  
Sbjct: 180 IVALTSCLIGVVITYQSALQLQKFGANIFIVDMIGISVTRELAPLITAIVVAGRTGSSYT 239

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A++G+M I EEI A+RTMG +  R L+ PRI AL+I +PLL + A+   I G  IV   +
Sbjct: 240 AQLGAMTITEEISAMRTMGFEPHRFLVLPRIIALMIVMPLLILFADVIGIAGGMIVSNIH 299

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            +I +A F  R      + +++ GL K PF A  I I     GF V  ++ SLG+  T  
Sbjct: 300 LNISYAEFIHRLQHVLDIKHLWIGLFKGPFFAWLIAITGCFRGFQVASNTESLGRYTTIS 359

Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373
           VV +I +VI  D+LF++ +  +G+
Sbjct: 360 VVNAIFLVIACDALFSVIFTELGL 383


>gi|325273982|ref|ZP_08140141.1| hypothetical protein G1E_12667 [Pseudomonas sp. TJI-51]
 gi|324100871|gb|EGB98558.1| hypothetical protein G1E_12667 [Pseudomonas sp. TJI-51]
          Length = 374

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/372 (33%), Positives = 198/372 (53%), Gaps = 25/372 (6%)

Query: 16  KSPEISEIADDVVMAINKSIQSDS----------AIVDLSAITEIDTIGAELIMYFMEKY 65
           + P    IA D  +A   S++ DS           + DLS +  +DT GA L+   +   
Sbjct: 12  RQPACLRIAGDWTLAHYASLKRDSERLRAQYTPDTVADLSQLGRLDTAGASLLAELL--- 68

Query: 66  HGKIKLQGVSTHIEQ-----LFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
            G  +L   +  + +     L ++        I  ++P+R    N    L   IG  +  
Sbjct: 69  -GTERLSRCTHDLPEASRALLKNVYQSVQDYCIPVKEPER----NVLLLLLERIGCAVGT 123

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
              DS      +G+++          ++++  +  ++  +   G+   P+V L++F+ GA
Sbjct: 124 LWQDSMQLLGFIGVILETLLRRALQPHRWR--ITPVVAHIEQTGLDAAPIVALLTFLVGA 181

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A  GA  L+ FGA +F++DL++   LRE  VLLTA+++AGR+ SA  A+IGSMK NEE
Sbjct: 182 VVAFLGATVLADFGATVFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEE 241

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDAIRT+GL+ + +L+ PR+ AL+I+LPLLT +A    I+G ++V      I  A+F S 
Sbjct: 242 IDAIRTLGLNPMELLVVPRVLALLITLPLLTFVAMLCGIVGGAVVCALSLGISPAMFLSL 301

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             S   + +   GL KAPF A  I  +   EGF V   + S+G   T+ VVQSI +VI++
Sbjct: 302 LQSDIGVQHFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVIVL 361

Query: 361 DSLFAIFYFAIG 372
           D++ A+F+  +G
Sbjct: 362 DAVAALFFMEMG 373


>gi|238791990|ref|ZP_04635626.1| ABC transporter, permease protein [Yersinia intermedia ATCC 29909]
 gi|238728621|gb|EEQ20139.1| ABC transporter, permease protein [Yersinia intermedia ATCC 29909]
          Length = 381

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/280 (38%), Positives = 162/280 (57%), Gaps = 11/280 (3%)

Query: 95  NQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNT--GEFCASSYKFKGF 152
           ++KP R F+     N     G+ +     D  S    +GL +       F  S ++    
Sbjct: 110 SEKPAR-FWLEMLAN----TGRSVDNLWQDIKSLLGFIGLALETLLGTLFRPSRWRIT-- 162

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
             SLI  +  +G++ VP+++L++F+ GAVIA  GA  L+ FGA IF++DL+    LRE  
Sbjct: 163 --SLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTTFGAGIFTVDLVVFSFLREFA 220

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
           VLLTA+++AGR+ SA  AEIG MK NEEIDAI+T+GL+ V +L+ PR+ AL+ISLP+LT 
Sbjct: 221 VLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPVELLVLPRVLALLISLPMLTF 280

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           +     I G  +V     DI   +F S   ++  L +   G+ KAP  A  I I+   EG
Sbjct: 281 IGMVCGIFGGMVVCALTLDISPTMFLSIMQNSNGLQHFLVGISKAPIFAFLIAIIGCLEG 340

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           F V   + S+G   TT VV SI +VI++D++ A+F+  +G
Sbjct: 341 FKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEMG 380


>gi|313496513|gb|ADR57879.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
          Length = 374

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/369 (33%), Positives = 198/369 (53%), Gaps = 17/369 (4%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R  G+W     + +  +    +     +D+ + DLS +  +DT GA L+   +    G 
Sbjct: 17  LRITGDWTLAHYASLKRES-ERLRSQCPADT-VADLSQLGRLDTAGASLLAELL----GS 70

Query: 69  IKLQGVSTHIEQ-----LFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
            +L   +  + +     L ++        I  ++P+R    N    L   IG+ +     
Sbjct: 71  ERLSRCTHALPEASQALLKNVYCSVQDYCIPVKEPER----NVLLLLLERIGRAVGTLWQ 126

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
           DS      +G+++          ++++     ++  +   G+   P+V L++F+ GAV+A
Sbjct: 127 DSMQLLGFVGVILETLLRRAFQPHRWR--FTPVVAHIEQTGLDAAPIVALLTFLVGAVVA 184

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
             GA  L+ FGA IF++DL++   LRE  VLLTA+++AGR+ SA  A+IGSMK NEEIDA
Sbjct: 185 FLGATVLADFGATIFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDA 244

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           IRT+GL+ + +L+ PR+ AL+ISLPLLT +A    I+G ++V     DI  A+F S   S
Sbjct: 245 IRTLGLNPMELLVVPRVLALLISLPLLTFVAMICGIVGGAVVCALTLDISPAMFLSLLQS 304

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              + +   GL KAPF A  I  +   EGF V   + S+G   T+ VVQSI +VI++D++
Sbjct: 305 DIGVQHFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVIVLDAV 364

Query: 364 FAIFYFAIG 372
            A+F+  +G
Sbjct: 365 AALFFMEMG 373


>gi|238751983|ref|ZP_04613468.1| ABC transporter, permease protein [Yersinia rohdei ATCC 43380]
 gi|238709817|gb|EEQ02050.1| ABC transporter, permease protein [Yersinia rohdei ATCC 43380]
          Length = 381

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/218 (44%), Positives = 143/218 (65%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           SLI  +  +G++ VP+++L++F+ GAVIA  GA  L+ FGA IF++DL+    LRE  VL
Sbjct: 163 SLIANVQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTTFGAGIFTVDLVVFSFLREFAVL 222

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           LTA+++AGR+ SA  AEIG MK NEEIDAI+T+GL+ V +L+ PR+ AL+ISLP+LT + 
Sbjct: 223 LTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPVELLVLPRVLALLISLPMLTFIG 282

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
               I G  +V     +I   +F S   ++  L +   G+ KAP  A  I I+   EGF 
Sbjct: 283 MVCGIFGGMVVCALELNISPTMFLSIMQNSNGLQHFLVGISKAPIFAFLIAIIGCLEGFK 342

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           V   + S+G+  TT VVQSI +VI++D++ A+F+  +G
Sbjct: 343 VTGSAESVGEHTTTSVVQSIFVVILLDAIAALFFMEMG 380


>gi|26986887|ref|NP_742312.1| hypothetical protein PP_0142 [Pseudomonas putida KT2440]
 gi|24981490|gb|AAN65776.1|AE016203_9 ABC transporter, permease protein, putative [Pseudomonas putida
           KT2440]
          Length = 377

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/369 (33%), Positives = 198/369 (53%), Gaps = 17/369 (4%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R  G+W     + +  +    +     +D+ + DLS +  +DT GA L+   +    G 
Sbjct: 20  LRITGDWTLAHYANLKRES-ERLRSHCPADT-VADLSQLGRLDTAGASLLAELL----GS 73

Query: 69  IKLQGVSTHIEQ-----LFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
            +L   +  + +     L ++        I  ++P+R    N    L   IG+ +     
Sbjct: 74  ERLSHCTHALPEASQALLKNVYCSVQDYCIPVKEPER----NVLLLLLERIGRAVGTLWQ 129

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
           DS      +G+++          ++++     ++  +   G+   P+V L++F+ GAV+A
Sbjct: 130 DSMQLLGFVGVILETLLRRAFQPHRWR--FTPVVAHIEQTGLDAAPIVALLTFLVGAVVA 187

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
             GA  L+ FGA IF++DL++   LRE  VLLTA+++AGR+ SA  A+IGSMK NEEIDA
Sbjct: 188 FLGATVLADFGATIFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDA 247

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           IRT+GL+ + +L+ PR+ AL+ISLPLLT +A    I+G ++V     DI  A+F S   S
Sbjct: 248 IRTLGLNPMELLVVPRVLALLISLPLLTFVAMICGIVGGAVVCALTLDISPAMFLSLLQS 307

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              + +   GL KAPF A  I  +   EGF V   + S+G   T+ VVQSI +VI++D++
Sbjct: 308 DIGVQHFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVIVLDAV 367

Query: 364 FAIFYFAIG 372
            A+F+  +G
Sbjct: 368 AALFFMEMG 376


>gi|123441584|ref|YP_001005570.1| ABC transporter, membrane permease [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122088545|emb|CAL11339.1| ABC transporter, membrane permease [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 381

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/281 (38%), Positives = 164/281 (58%), Gaps = 11/281 (3%)

Query: 94  KNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISN--TGEFCASSYKFKG 151
            ++KP  SF+     N     G+ +     D  S    +GL +    +  F  S ++   
Sbjct: 109 SSEKPP-SFWLEFLAN----TGRSVDNLWQDIKSLLGFVGLTLEALFSTIFRPSRWR--- 160

Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211
            + SLI  +  +G++ VP+++L++F+ GAVIA  GA  L+ FGA IF++DL+    LRE 
Sbjct: 161 -MTSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTTFGAGIFTVDLVVFSFLREF 219

Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271
            VLLTA+++AGR+ SA  AEIG MK NEEIDAI+T+GL+ V +L+ PR+ AL+ISLP+LT
Sbjct: 220 AVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPVELLVLPRVLALLISLPMLT 279

Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
            +     I G  +V     DI   +F S   ++  L +   G+ KAP  A  I I+   E
Sbjct: 280 FIGMICGIFGGMVVCALALDISPTMFLSIMQNSNGLQHFLVGISKAPIFAFLIAIIGCLE 339

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           GF V   + S+G   TT VV SI +VI++D++ A+F+  +G
Sbjct: 340 GFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEMG 380


>gi|330861182|emb|CBX71439.1| hypothetical protein YEW_CA08640 [Yersinia enterocolitica W22703]
          Length = 381

 Score =  174 bits (440), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/281 (38%), Positives = 164/281 (58%), Gaps = 11/281 (3%)

Query: 94  KNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISN--TGEFCASSYKFKG 151
            ++KP  SF+     N     G+ +     D  S    +GL +    +  F  S ++   
Sbjct: 109 SSEKPP-SFWLEFLAN----TGRSVDNLWQDIKSLLGFVGLTLEALFSTIFRPSRWR--- 160

Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211
            + SLI  +  +G++ VP+++L++F+ GAVIA  GA  L+ FGA IF++DL+    LRE 
Sbjct: 161 -MTSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTTFGAGIFTVDLVVFSFLREF 219

Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271
            VLLTA+++AGR+ SA  AEIG MK NEEIDAI+T+GL+ V +L+ PR+ AL+ISLP+LT
Sbjct: 220 AVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPVELLVLPRVLALLISLPMLT 279

Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
            +     I G  +V     DI   +F S   ++  L +   G+ KAP  A  I I+   E
Sbjct: 280 FIGMICGIFGGMVVCALALDISPTMFLSIMQNSNGLQHFLVGISKAPIFAFLIAIIGCLE 339

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           GF V   + S+G   TT VV SI +VI++D++ A+F+  +G
Sbjct: 340 GFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEMG 380


>gi|332162490|ref|YP_004299067.1| ABC transporter, membrane permease [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325666720|gb|ADZ43364.1| ABC transporter, membrane permease [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 354

 Score =  174 bits (440), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/281 (38%), Positives = 163/281 (58%), Gaps = 11/281 (3%)

Query: 94  KNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISN--TGEFCASSYKFKG 151
            ++KP  SF+     N     G+ +     D  S    +GL +    +  F  S ++   
Sbjct: 82  SSEKPP-SFWLEFLAN----TGRSVDNLWQDIKSLLGFVGLTLEALFSTIFRPSRWRMT- 135

Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211
              SLI  +  +G++ VP+++L++F+ GAVIA  GA  L+ FGA IF++DL+    LRE 
Sbjct: 136 ---SLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTTFGAGIFTVDLVVFSFLREF 192

Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271
            VLLTA+++AGR+ SA  AEIG MK NEEIDAI+T+GL+ V +L+ PR+ AL+ISLP+LT
Sbjct: 193 AVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPVELLVLPRVLALLISLPMLT 252

Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
            +     I G  +V     DI   +F S   ++  L +   G+ KAP  A  I I+   E
Sbjct: 253 FIGMICGIFGGMVVCALALDISPTMFLSIMQNSNGLQHFLVGISKAPIFAFLIAIIGCLE 312

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           GF V   + S+G   TT VV SI +VI++D++ A+F+  +G
Sbjct: 313 GFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEMG 353


>gi|223040212|ref|ZP_03610491.1| ABC transport system permease [Campylobacter rectus RM3267]
 gi|222878573|gb|EEF13675.1| ABC transport system permease [Campylobacter rectus RM3267]
          Length = 378

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/345 (32%), Positives = 182/345 (52%), Gaps = 26/345 (7%)

Query: 38  DSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIK--- 94
           D  +++   + E+D   A  +   +       +L  ++ H +++F+ I+     KIK   
Sbjct: 51  DKIVLNFKDVKELDYAAALFLKNTLLNARKNYELVNLTPHAQRIFASINSEVNPKIKQII 110

Query: 95  NQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLL 154
           N KP         +N    IGK +        +        ++ TGEF     K   F+L
Sbjct: 111 NAKPH--------ENPLSQIGKNLA-------AFFAGFCAFLNFTGEFLVKFSKI--FML 153

Query: 155 SLIR----QMYY--VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL 208
             IR      Y+   G+  V +V L SF+ G V+A QG+  L +FGA I  +++M +L L
Sbjct: 154 KNIRVKEILAYFEDAGIKSVFIVCLTSFLIGIVLAYQGSNLLERFGATIIIVEMMGLLTL 213

Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268
           REI  L+ A+++AGR  S+  A+IG MKI EEIDA++TMG D  + L+ PR+ ALI+++P
Sbjct: 214 REIAPLIAAIIVAGRLASSFTAQIGVMKITEEIDAMKTMGFDPFKFLVLPRVIALIVAMP 273

Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328
           L+  LA+ + I G  +V+  Y +I F  + +RF     + +++ GL KAPF    I  + 
Sbjct: 274 LIVFLADVAGIFGEMVVMENYLNIGFDSYLARFEQEVEIKHLYVGLFKAPFFGVVIAFIG 333

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
              GF +  ++ S+G   T  VV +I  VI++D+LF++ +  +GI
Sbjct: 334 CMRGFQISGNTQSVGTYTTVSVVNAIFGVIMVDALFSVIFTHLGI 378


>gi|139001578|dbj|BAF51698.1| putative innermembrane component of ABC transporter system
           [Sphingobium japonicum]
          Length = 316

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 88/218 (40%), Positives = 141/218 (64%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           +++++   VGVS + ++ L+SF+ G VIAQQG+ QL QFG E+ +I+L+  L  RE+GVL
Sbjct: 97  AVVQRFEVVGVSALGIIGLMSFLIGIVIAQQGSVQLRQFGMEMLTINLVGRLTFRELGVL 156

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA+M+AGRSGSA  A++G+MK+ EE+DA+RT+G+  +  L+ PR  A+++ +PLL   +
Sbjct: 157 MTAIMVAGRSGSAFAAQLGTMKLTEEVDAMRTIGVSPMEALVLPRTLAVVVMMPLLGFYS 216

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
           +  AIIG   +     DIP   F  R      + +++ GLIKAP     I +    +G  
Sbjct: 217 SIVAIIGGGFLCAVSLDIPPITFVQRLREVVPIHDLWVGLIKAPVFGVIIALAGCFQGMQ 276

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           V  ++  +G + T  VVQ+I +VI+ID+ FA+F+  +G
Sbjct: 277 VKANAEEVGLRTTAAVVQAIFLVIVIDAFFAVFFTWVG 314


>gi|318606570|emb|CBY28068.1| ABC-type transport system involved in resistance to organic
           solvents, permease component USSDB6A [Yersinia
           enterocolitica subsp. palearctica Y11]
          Length = 354

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/281 (38%), Positives = 163/281 (58%), Gaps = 11/281 (3%)

Query: 94  KNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISN--TGEFCASSYKFKG 151
            ++KP  SF+     N     G+ +     D  S    +GL +    +  F  S ++   
Sbjct: 82  SSEKPP-SFWLEFLAN----TGRSVDNLWQDIKSLLGFVGLTLEVLFSTIFRPSRWRMT- 135

Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211
              SLI  +  +G++ VP+++L++F+ GAVIA  GA  L+ FGA IF++DL+    LRE 
Sbjct: 136 ---SLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTTFGAGIFTVDLVVFSFLREF 192

Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271
            VLLTA+++AGR+ SA  AEIG MK NEEIDAI+T+GL+ V +L+ PR+ AL+ISLP+LT
Sbjct: 193 AVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPVELLVLPRVLALLISLPMLT 252

Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
            +     I G  +V     DI   +F S   ++  L +   G+ KAP  A  I I+   E
Sbjct: 253 FIGMICGIFGGMVVCALALDISPTMFLSIMQNSNGLQHFLVGISKAPIFAFLIAIIGCLE 312

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           GF V   + S+G   TT VV SI +VI++D++ A+F+  +G
Sbjct: 313 GFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEMG 353


>gi|148545417|ref|YP_001265519.1| hypothetical protein Pput_0160 [Pseudomonas putida F1]
 gi|148509475|gb|ABQ76335.1| protein of unknown function DUF140 [Pseudomonas putida F1]
          Length = 377

 Score =  173 bits (438), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 123/372 (33%), Positives = 199/372 (53%), Gaps = 23/372 (6%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSA---IVDLSAITEIDTIGAELIMYFMEKY 65
            R  G+W     + +  +     ++ +++  A   I DLS +  +DT GA L+   +   
Sbjct: 20  LRITGDWTLAHYANLKRE-----SERLRTQCAANTIADLSQLGRLDTAGASLLAELL--- 71

Query: 66  HGKIKLQGVSTHIEQ-----LFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
            G  +L   +  + +     L ++        I  ++P+R    N    L   IG  +  
Sbjct: 72  -GSERLSRCTHALPEASQALLKNVYCSVQDYCIPVKEPER----NVLLLLLERIGCAVGT 126

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
              DS      +G+++          ++++     ++  +   G+   P+V L++F+ GA
Sbjct: 127 LWQDSMQLLGFVGVILETLLRRAFQPHRWR--FTPVVAHIEQTGLDAAPIVALLTFLVGA 184

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A  GA  L+ FGA IF++DL++   LRE  VLLTA+++AGR+ SA  A+IGSMK NEE
Sbjct: 185 VVAFLGATVLADFGATIFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEE 244

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDAIRT+GL+ + +L+ PR+ AL+ISLPLLT +A    I+G ++V     DI  A+F S 
Sbjct: 245 IDAIRTLGLNPMELLVVPRVLALLISLPLLTFVAMICGIVGGAVVCALTLDISPAMFLSL 304

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             S   + +   GL KAPF A  I  +   EGF V   + S+G   T+ VVQSI +VI++
Sbjct: 305 LQSDIGVQHFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVIVL 364

Query: 361 DSLFAIFYFAIG 372
           D++ A+F+  +G
Sbjct: 365 DAVAALFFMEMG 376


>gi|121998618|ref|YP_001003405.1| hypothetical protein Hhal_1839 [Halorhodospira halophila SL1]
 gi|121590023|gb|ABM62603.1| protein of unknown function DUF140 [Halorhodospira halophila SL1]
          Length = 376

 Score =  173 bits (438), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 112/338 (33%), Positives = 182/338 (53%), Gaps = 16/338 (4%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKN--QKPQ 99
           VDLSA+  +DT GA L+   +    G  +++ ++    +L    S   RK ++      +
Sbjct: 47  VDLSALGRLDTAGATLLARLL----GAARVEALARSTPEL----SAERRKLLQAVAAASE 98

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTG----EFCASSYK-FKGFLL 154
           R+      +   Y +G+  +          H L   I  TG     F A   + ++  L 
Sbjct: 99  RARTAPEPRGDPYFLGQLTIGLGAQMTHAGHQLARAIGFTGLVIAAFAAGLLRPWRWRLA 158

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           ++ RQ+ +  +  +P+V L++F  GAVIA  G   L +FGA IF++DL++   LRE GV+
Sbjct: 159 AVSRQLQHTALEALPIVALLTFAVGAVIAVLGVTVLGRFGAGIFTVDLVAYAFLREFGVV 218

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           LTA+++AGRS SA  A+IGSMK NEE+DA+R  G   + +L+ PR+ AL+I++PLL+ +A
Sbjct: 219 LTAILLAGRSASAFTAQIGSMKANEELDAMRAQGFSPIEMLVIPRVVALLIAVPLLSFVA 278

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
               + G  +V     D+P     +  +S  ++++   GL KAP  A  I I+   EG  
Sbjct: 279 VVCGLAGGGLVTLLNVDVPAGRIIA-LYSDISVSHYLAGLAKAPIFAFVIAIIGCLEGIK 337

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
               + S+G   T+ VVQSI  VII++++ A+ Y  +G
Sbjct: 338 CSASAQSVGTHTTSAVVQSIFWVIILNAVAALIYVELG 375


>gi|238764189|ref|ZP_04625142.1| ABC transporter, permease protein [Yersinia kristensenii ATCC
           33638]
 gi|238697602|gb|EEP90366.1| ABC transporter, permease protein [Yersinia kristensenii ATCC
           33638]
          Length = 381

 Score =  172 bits (436), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 96/218 (44%), Positives = 141/218 (64%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           SLI  +  +G++ VP+++L++F+ GAVIA  GA  L+ FGA IF++DL+    LRE  VL
Sbjct: 163 SLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTTFGAGIFTVDLVVFSFLREFAVL 222

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           LTA+++AGR+ SA  AEIG MK NEEIDAI+T+GL+ V +L+ PR+ AL++SLP+LT + 
Sbjct: 223 LTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPVELLVLPRVLALLVSLPMLTFIG 282

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
               I G  +V     DI   +F S   ++  L +   G+ KAP  A  I I+   EGF 
Sbjct: 283 MVCGIFGGMVVCALTLDISPTMFLSIMQNSNGLQHFLVGISKAPIFAFLIAIIGCLEGFK 342

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           V   + S+G   TT VV SI +VI++D++ A+F+  +G
Sbjct: 343 VTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEMG 380


>gi|104779408|ref|YP_605906.1| ABC transporter permease [Pseudomonas entomophila L48]
 gi|95108395|emb|CAK13089.1| putative ABC transporter, permease protein [Pseudomonas entomophila
           L48]
          Length = 374

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/374 (33%), Positives = 200/374 (53%), Gaps = 13/374 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           ++   T    AG+W     + +  +       S   D   VDLS +  +DT GA L+   
Sbjct: 10  TQQQPTRLHIAGDWTLAHYASLKRECERL--GSQYGDDTQVDLSQLGRLDTAGASLLAEL 67

Query: 62  M--EKY-HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
           +  E+  H    L   S  +  L ++        I  ++P++         L   IG+ +
Sbjct: 68  LGSERLSHCTDDLPDASRAL--LKNVYCSVQDYCIPVKQPEQPVLLL----LLARIGRAV 121

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
            +   D+      +GL++          ++++  +  ++  +   G+   P+V L++F+ 
Sbjct: 122 DQLWQDTRQVLGFIGLILETLLLRLFQPHRWR--VTPVVAHLEQTGLDAAPIVALLTFLV 179

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GAV+A  GA  L+ FGA IF++DL++   LRE  VLLTA+++AGR+ SA  A+IGSMK N
Sbjct: 180 GAVVAFLGATVLAAFGATIFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKAN 239

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDAIRT+GL+ + +L+ PR+ AL+I+LPLLT LA    ++G ++V     DI  A+F 
Sbjct: 240 EEIDAIRTLGLNPIELLVVPRVLALLIALPLLTFLAMLCGLVGGAVVCALTLDISPAMFL 299

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           S   S   + +   GL KAPF A  I  +   EGF V   + S+G   T+ VVQSI +VI
Sbjct: 300 SLLQSDIGVQHFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVI 359

Query: 359 IIDSLFAIFYFAIG 372
           ++D++ A+F+  +G
Sbjct: 360 VLDAVAALFFMEMG 373


>gi|238789963|ref|ZP_04633742.1| ABC transporter, permease protein [Yersinia frederiksenii ATCC
           33641]
 gi|238721911|gb|EEQ13572.1| ABC transporter, permease protein [Yersinia frederiksenii ATCC
           33641]
          Length = 381

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/306 (36%), Positives = 173/306 (56%), Gaps = 7/306 (2%)

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF-KNLHYHIGKKIVKFINDSCSQ 128
           KL+ ++  + Q   ++  T    +   +P+ S    SF   L  + G+ +     D  S 
Sbjct: 79  KLRELAPKLPQERRVLLETVSHVLPGLEPESSEKPPSFWLELLANTGRSMDNLWQDIKSL 138

Query: 129 AHILGLVISNT--GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
              +GL +       F  S ++      SLI  +  +G++ VP+++L++F+ GAVIA  G
Sbjct: 139 LGFVGLTLEALFGTVFRPSRWRVT----SLIANVQQIGLNAVPIIMLLTFLVGAVIAFLG 194

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A  L+ FGA IF++DL+    LRE  VLLTA+++AGR+ SA  AEIG MK NEEIDAI+T
Sbjct: 195 ATVLTTFGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQT 254

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +GL+ V +L+ PR+ AL+ISLP+LT +     I G  +V     +I   +F S   ++  
Sbjct: 255 LGLNPVELLVLPRVLALLISLPMLTFIGMVCGIFGGMVVCALTLNISPTMFLSIMQNSNG 314

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L +   G+ KAP  A  I I+   EGF V   + S+G   TT VV SI +VI++D++ A+
Sbjct: 315 LQHFLVGISKAPIFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAAL 374

Query: 367 FYFAIG 372
           F+  +G
Sbjct: 375 FFMEMG 380


>gi|116051201|ref|YP_789968.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|218890596|ref|YP_002439460.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254236173|ref|ZP_04929496.1| hypothetical protein PACG_02138 [Pseudomonas aeruginosa C3719]
 gi|254241899|ref|ZP_04935221.1| hypothetical protein PA2G_02620 [Pseudomonas aeruginosa 2192]
 gi|115586422|gb|ABJ12437.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126168104|gb|EAZ53615.1| hypothetical protein PACG_02138 [Pseudomonas aeruginosa C3719]
 gi|126195277|gb|EAZ59340.1| hypothetical protein PA2G_02620 [Pseudomonas aeruginosa 2192]
 gi|218770819|emb|CAW26584.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
          Length = 381

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 92/218 (42%), Positives = 138/218 (63%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
            L+  +   G+  VP++ L++F+ GAVIA  GA  L+ FGA I++++L+    LRE  VL
Sbjct: 163 PLVANIEKSGLDAVPIIALLTFLVGAVIAFLGATVLANFGATIYTVNLVVFSFLREFAVL 222

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           LTA+++AGR+ SA  A+IGSMK NEEIDAIR +GL+ + +L+ PR+ AL++SLP+LT + 
Sbjct: 223 LTAILMAGRTASAFTAQIGSMKANEEIDAIRALGLNPIELLVLPRVLALLVSLPMLTFVG 282

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
               I+G   V     DIP A+F S       + +   G+ KAP  A  I ++   EGF 
Sbjct: 283 MLCGIVGGMTVCAWTLDIPPAMFLSIMEDGIGVQHFLVGISKAPLFAFLIAVIGCLEGFK 342

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           V   + S+G+  TT VV SI +VI++D+L A+F+  +G
Sbjct: 343 VSGSAQSVGEHTTTSVVHSIFVVILLDALAALFFMEMG 380


>gi|313108528|ref|ZP_07794529.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016]
 gi|310881031|gb|EFQ39625.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016]
          Length = 343

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 92/218 (42%), Positives = 138/218 (63%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
            L+  +   G+  VP++ L++F+ GAVIA  GA  L+ FGA I++++L+    LRE  VL
Sbjct: 125 PLVANIEKSGLDAVPIIALLTFLVGAVIAFLGATVLANFGATIYTVNLVVFSFLREFAVL 184

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           LTA+++AGR+ SA  A+IGSMK NEEIDAIR +GL+ + +L+ PR+ AL++SLP+LT + 
Sbjct: 185 LTAILMAGRTASAFTAQIGSMKANEEIDAIRALGLNPIELLVLPRVLALLVSLPMLTFVG 244

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
               I+G   V     DIP A+F S       + +   G+ KAP  A  I ++   EGF 
Sbjct: 245 MLCGIVGGMTVCAWTLDIPPAMFLSIMEDGIGVQHFLVGISKAPLFAFLIAVIGCLEGFK 304

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           V   + S+G+  TT VV SI +VI++D+L A+F+  +G
Sbjct: 305 VSGSAQSVGEHTTTSVVHSIFVVILLDALAALFFMEMG 342


>gi|152984282|ref|YP_001347296.1| ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150959440|gb|ABR81465.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7]
          Length = 381

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 92/218 (42%), Positives = 138/218 (63%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
            L+  +   G+  VP++ L++F+ GAVIA  GA  L+ FGA I++++L+    LRE  VL
Sbjct: 163 PLVANIEKSGLDAVPIIALLTFLVGAVIAFLGATVLANFGATIYTVNLVVFSFLREFAVL 222

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           LTA+++AGR+ SA  A+IGSMK NEEIDAIR +GL+ + +L+ PR+ AL++SLP+LT + 
Sbjct: 223 LTAILMAGRTASAFTAQIGSMKANEEIDAIRALGLNPIELLVLPRVLALLVSLPMLTFVG 282

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
               I+G   V     DIP A+F S       + +   G+ KAP  A  I ++   EGF 
Sbjct: 283 MLCGIVGGMTVCAWSLDIPPAMFLSIMEDGIGVQHFLVGISKAPLFAFLIAVIGCLEGFK 342

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           V   + S+G+  TT VV SI +VI++D+L A+F+  +G
Sbjct: 343 VSGSAQSVGEHTTTSVVHSIFVVILLDALAALFFMEMG 380


>gi|107102741|ref|ZP_01366659.1| hypothetical protein PaerPA_01003808 [Pseudomonas aeruginosa PACS2]
          Length = 372

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 92/218 (42%), Positives = 138/218 (63%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
            L+  +   G+  VP++ L++F+ GAVIA  GA  L+ FGA I++++L+    LRE  VL
Sbjct: 154 PLVANIEKSGLDAVPIIALLTFLVGAVIAFLGATVLANFGATIYTVNLVVFSFLREFAVL 213

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           LTA+++AGR+ SA  A+IGSMK NEEIDAIR +GL+ + +L+ PR+ AL++SLP+LT + 
Sbjct: 214 LTAILMAGRTASAFTAQIGSMKANEEIDAIRALGLNPIELLVLPRVLALLVSLPMLTFVG 273

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
               I+G   V     DIP A+F S       + +   G+ KAP  A  I ++   EGF 
Sbjct: 274 MLCGIVGGMTVCAWTLDIPPAMFLSIMEDGIGVQHFLVGISKAPLFAFLIAVIGCLEGFK 333

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           V   + S+G+  TT VV SI +VI++D+L A+F+  +G
Sbjct: 334 VSGSAQSVGEHTTTSVVHSIFVVILLDALAALFFMEMG 371


>gi|222823161|ref|YP_002574734.1| ABC transporter permease (DUF140 domain protein) [Campylobacter
           lari RM2100]
 gi|222538382|gb|ACM63483.1| putative ABC transporter, permease protein (DUF140 domain protein)
           [Campylobacter lari RM2100]
          Length = 370

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/377 (32%), Positives = 196/377 (51%), Gaps = 34/377 (9%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +N   +F   G W    + ++ + +     K+I     I D + +  IDT G   I YF+
Sbjct: 10  KNHECIFSVFGIWDKTSVGKL-EKLDFPTQKNI-----IFDFTNLDFIDTAG---IRYFL 60

Query: 63  EKYHGKIKLQG-------VSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIG 115
                ++K +G       + +   +LF L    H K   +    +    + F+NL    G
Sbjct: 61  A-LENELKQKGFELSRVNLKSEHAKLFELCQ-KHYKSFCDSYEDKKTIKDFFENL----G 114

Query: 116 KKIVKFINDSCSQAHILGLVISNTGE--FCASSYKFKGFLLSLIRQMYYV---GVSGVPV 170
           KK+V+         + +GL+I+      F     +F+ FL       Y+V    ++ +P+
Sbjct: 115 KKVVESFTLLVQFLNFIGLIIATCFNTLFHLKKLRFRAFL-------YHVENSAINALPI 167

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           ++L S + G V+A Q A+QL+QFGA I+ +DLM I   RE+  L++A++IAGRS S+  A
Sbjct: 168 IMLTSLLVGVVLAYQAAYQLAQFGANIYIVDLMGISATRELAPLISAIVIAGRSASSYTA 227

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           +IG MK+ +EIDA++TMG      +I PR+ AL +++PL+ I+A+  +IIG  IV W   
Sbjct: 228 QIGVMKLTDEIDAMKTMGFKESEFIILPRVLALALAMPLVVIVADILSIIGGIIVAWFSL 287

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
           +I  + F SRF     L +I  GLIKAP     I  +A   GF V   + S+G   T  V
Sbjct: 288 EISASEFMSRFKEAVELKHIIIGLIKAPIFGFLIASIACFRGFFVQKTTESIGVYTTKSV 347

Query: 351 VQSISIVIIIDSLFAIF 367
           V +I  VI  D++F++F
Sbjct: 348 VNAIFWVIAFDAIFSVF 364


>gi|296388302|ref|ZP_06877777.1| ABC transporter permease [Pseudomonas aeruginosa PAb1]
          Length = 343

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 92/218 (42%), Positives = 138/218 (63%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
            L+  +   G+  VP++ L++F+ GAVIA  GA  L+ FGA I++++L+    LRE  VL
Sbjct: 125 PLVANIEKSGLDAVPIIALLTFLVGAVIAFLGATVLANFGATIYTVNLVVFSFLREFAVL 184

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           LTA+++AGR+ SA  A+IGSMK NEEIDAIR +GL+ + +L+ PR+ AL++SLP+LT + 
Sbjct: 185 LTAILMAGRTASAFTAQIGSMKANEEIDAIRALGLNPIELLVLPRVLALLVSLPMLTFVG 244

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
               I+G   V     DIP A+F S       + +   G+ KAP  A  I ++   EGF 
Sbjct: 245 MLCGIVGGMTVCAWTLDIPPAMFLSIMEDGIGVQHFLVGISKAPLFAFLIAVIGCLEGFK 304

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           V   + S+G+  TT VV SI +VI++D+L A+F+  +G
Sbjct: 305 VSGSAQSVGEHTTTSVVHSIFVVILLDALAALFFMEMG 342


>gi|224371971|ref|YP_002606137.1| ABC-type transporter, permease protein [Desulfobacterium
           autotrophicum HRM2]
 gi|223694690|gb|ACN17973.1| ABC-type transporter, permease protein [Desulfobacterium
           autotrophicum HRM2]
          Length = 373

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/342 (34%), Positives = 182/342 (53%), Gaps = 22/342 (6%)

Query: 41  IVDLSAITEIDTIGAELIMY----FMEKYHGKIKLQGVSTHIEQLFSL---ISFTHRKKI 93
           ++DL  +  +D+ GA L+ +    + ++  GKI + G+    +Q+  L   I  T   + 
Sbjct: 45  VIDLKRVDHMDSAGAALVWFIKTTWKQRTGGKISVLGLKPAFKQVMDLTETIPDTRDGEK 104

Query: 94  KNQKPQRSFFYNSFKNLHYHIGKKIVKFIN--DSCSQAHILGLVISNTGEFCASSYKFKG 151
           K +K   SF     KN    + +K   FI      ++A I          F   S ++K 
Sbjct: 105 KPKKKPPSFVETRGKNFADQM-EKATSFIALVGQITRALIHAF-------FHPLSVRWKD 156

Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211
            LL+  R     GV+ +P+V LISF+ G V+A Q A  +  FGAEI+  +L+ I  +RE+
Sbjct: 157 ALLTAERS----GVNALPIVALISFIVGLVMAFQAAMPMKMFGAEIYVANLIGIAMVREL 212

Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271
           G L+TA+++AGRSGSA  AEIG+MKINEEIDA+ TMGLD VR L+ PRI A +   PLLT
Sbjct: 213 GPLMTAIILAGRSGSAFAAEIGTMKINEEIDALSTMGLDPVRFLMVPRILAAVFITPLLT 272

Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
           I +NF  I+G SIV+      P   ++S+  S  T  +   GL+K       I       
Sbjct: 273 IFSNFVGIMGGSIVLLS-MGYPAITYYSQVISFVTWIDFTGGLVKCFVFGILISAAGCIR 331

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           G        ++G   T+ VV  I+++ + D +F++ ++ +GI
Sbjct: 332 GIETQSGPGAVGASTTSAVVTGITLIAVFDGIFSVLFYCLGI 373


>gi|28974221|gb|AAO64222.1| putative ABC transport system permease protein Cf0016
           [Campylobacter fetus]
          Length = 367

 Score =  170 bits (431), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/343 (32%), Positives = 181/343 (52%), Gaps = 19/343 (5%)

Query: 33  KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKK 92
           +S++ D+  +DL  +  ID   A     F  K++   KL   +   +++F+L+S  +   
Sbjct: 42  RSLKVDT--LDLKNLIRIDYSAAT----FFAKHYNCPKLINSNDKFDKIFALVSDKYILN 95

Query: 93  IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSY--KFK 150
           ++  K ++S       NL   IGK I+   N+  S    LG  + N  +   + +  +FK
Sbjct: 96  LQIIKFKKS-------NLIEQIGKNIINLKNELVSFCIFLGEFLFNLTKSLLNPFTVRFK 148

Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210
                L    Y  G+S V +V L SF+ G V+A QGA  L  FGA I+ +D+M I+ LRE
Sbjct: 149 ----ELSNHFYSAGISAVFIVCLTSFLIGIVLAYQGATMLENFGASIYVVDIMGIMTLRE 204

Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
           +G L+ A+++AGRS S+  A+IG MKI +E++A++TMG +  R ++ P  +         
Sbjct: 205 VGPLIAAIVVAGRSASSYTAQIGVMKITDELEAMKTMGFEPFRFIVMPACFGSYFGYAFY 264

Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330
           +I +      G  +V   Y D+ F+ +  RF S+  L + + GL KAPF    I ++  K
Sbjct: 265 SIFSKRGKYFGQMMVCNWYLDLSFSDYLERFRSSIALRHFWVGLFKAPFFGAVIALIGCK 324

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
            GF V   +NS+G+  T  VV +I  +I +D++F+I Y  + I
Sbjct: 325 RGFEVSGSTNSVGELTTRSVVNAIFWIIALDAIFSIIYTELKI 367


>gi|218658451|ref|ZP_03514381.1| probable ABC transporter, permease protein [Rhizobium etli IE4771]
          Length = 184

 Score =  169 bits (429), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 89/155 (57%), Positives = 117/155 (75%)

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           ++MIAGRSGSAI AEIGSMK+ EEIDA++ MGL+ + +LI PR+ AL I+LPLLT+LANF
Sbjct: 28  SIMIAGRSGSAITAEIGSMKMREEIDALKVMGLNPIGVLIFPRLVALTIALPLLTVLANF 87

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           +++ GA+ V W Y  I FA F +R H   TL+ + +G+IKAPFMA  IGIVA  EG  VG
Sbjct: 88  ASLAGAAAVAWGYSGITFANFLARLHEAVTLSTVLSGMIKAPFMALVIGIVAAVEGLKVG 147

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
             + SLG+ VT  VV++I +VI++D LFA+FY AI
Sbjct: 148 GSAESLGQHVTASVVKAIFVVILMDGLFAMFYAAI 182


>gi|311694463|gb|ADP97336.1| ABC transporter, permease protein [marine bacterium HP15]
          Length = 388

 Score =  169 bits (429), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 181/331 (54%), Gaps = 3/331 (0%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
           ++LS +T IDT GA  +   +      ++     + + +  S +     + +KNQ     
Sbjct: 60  INLSGLTRIDTAGASQLASLIGPER-LLEAASADSELPRETSALIAAVCEAMKNQPEADR 118

Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY 161
              +   +     G+K+             +G  +          ++++  +   +  ++
Sbjct: 119 RSPSLVWSFVTGTGQKVESIFRLLWILVGFIGQTLGTLAWNLPRPWRWR--MTPFVAAVH 176

Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221
             G++ +P+V L++F+ GAV+A  GA  L  FGA I++++L++   LRE GVLL A+++A
Sbjct: 177 DTGLNALPIVALLTFLVGAVVAFLGATVLDDFGATIYTVNLVAFSFLREFGVLLAAILLA 236

Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281
           GR+ SA  A IG+MK+NEE+DAIRT+GL+ + +L+ PR+ A+++SLP+LT +   S ++G
Sbjct: 237 GRTASAFTAHIGAMKVNEELDAIRTLGLNPIELLVLPRVMAMMVSLPILTFVGMISGMVG 296

Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341
            ++V     DI    F +       L +   G++KAP  A  I ++   EGF V   + S
Sbjct: 297 GAMVCALVLDITPTQFMAIVERDIALQHFVVGIVKAPIFAFLIAVIGCLEGFKVAGSAQS 356

Query: 342 LGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           +G+  T+ VVQSI +VI++DS+ A+F+  +G
Sbjct: 357 VGEHTTSSVVQSIFMVILLDSIAALFFMEMG 387


>gi|157736379|ref|YP_001489062.1| ABC transporter, permease protein [Arcobacter butzleri RM4018]
 gi|157698233|gb|ABV66393.1| ABC transporter, permease protein [Arcobacter butzleri RM4018]
          Length = 370

 Score =  169 bits (428), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 180/333 (54%), Gaps = 12/333 (3%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYHGK-IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100
           +D + + E D+     ++ F+  +  K I +     H E++F      ++ K+  ++ ++
Sbjct: 49  IDFANLKECDSSAIIYLISFLNTFEEKNITILNNKNH-EKIFDFYKKHYQTKVL-EEEKK 106

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
           + F+       Y I K+  +FI       +     I     F  S  +FK    ++++ +
Sbjct: 107 NLFFEDLGKKSYDIYKESKEFIGFIGKVFYFFIYAI-----FNPSKIRFK----AMLKYI 157

Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
                  + +V + SF+ G VIA QG+ QL +FGA IF ++++SI   REI  L+TA++I
Sbjct: 158 ETSAFDALLIVAVTSFLVGVVIAYQGSVQLEKFGANIFIVEMISITIFREIAPLVTAIVI 217

Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280
           AGRS S+  AEIG+MKI EEIDA++TM  +    L  PRI+AL ISLPLL   A+   + 
Sbjct: 218 AGRSASSYTAEIGAMKITEEIDAMKTMNFEPTLFLTLPRIFALCISLPLLVFFADIIGVF 277

Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
           G  ++     D+ F  F +R H+   L ++  G+ KA F   AI I+    GF V  ++ 
Sbjct: 278 GGMVIASSSLDVTFIEFINRLHNEVPLKHLILGVFKALFFGFAIAIIGCYRGFQVQNNTT 337

Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           S+GK  T  VV +I +VI+ID++F++ +  +GI
Sbjct: 338 SIGKFTTMSVVNAIFVVILIDAVFSVIFTQMGI 370


>gi|329890329|ref|ZP_08268672.1| hypothetical protein BDIM_20300 [Brevundimonas diminuta ATCC 11568]
 gi|328845630|gb|EGF95194.1| hypothetical protein BDIM_20300 [Brevundimonas diminuta ATCC 11568]
          Length = 372

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 201/378 (53%), Gaps = 22/378 (5%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAIN-KSIQSDSAIVDLSAITEIDTIGAELIMY 60
           S++G T  R AG+W +  +  + D +   ++ +S+ +    +DL  +   DT GA  +  
Sbjct: 11  SQDGQTRLRLAGDWSTVAVGRMGDRLKAELDGRSVTA----LDLDDLGRFDTAGALAVAQ 66

Query: 61  FMEKYHGKIKLQGVSTHIE--QLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            M +    I     S   E  +L+ +++      +  + P+RS            +G+ +
Sbjct: 67  AMSR---PIPESAWSVRPEAGRLYRMVA--KLDCMTAEPPRRS---APMTRGFAKVGRGV 118

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFL--LSLIRQMYYVGVSGVPVVILISF 176
             F  ++      LG +++       ++ K  G +   +   Q    G+  +P+V++ +F
Sbjct: 119 YDFGAEAMLSLAFLGRLMAA----VLTTLKHPGRIRWAAWFSQAERTGLDAIPIVVVTNF 174

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             GAV+A  G   L+QFGA +F++ L+ +   RE  V++TAV++AGRS S+  AEIGSM+
Sbjct: 175 FIGAVVAFIGVDLLTQFGAGVFTVQLIGVAVFREFAVVITAVLLAGRSASSFAAEIGSMR 234

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           + +E+DA++ MG+D  + L+ PR+ AL++ LPLLT LA    ++G  +V W   ++  A 
Sbjct: 235 MTQEVDAMKVMGVDPFQALVIPRLAALLVMLPLLTFLAMVGGLLGGVLVAWSQLNLGPAF 294

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           FF R      +  ++  GLIKAP  A  +  +  ++G +V     SLG++VT  VVQ+I 
Sbjct: 295 FFQRLVEDGYMPTHMMVGLIKAPVFALVVAAIGCRQGMSVAGDVESLGRRVTAAVVQAIF 354

Query: 356 IVIIIDSLFAIFYFAIGI 373
            +I++D++FA+ +  + I
Sbjct: 355 AIILLDAVFALIFIELKI 372


>gi|220934666|ref|YP_002513565.1| protein of unknown function DUF140 [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995976|gb|ACL72578.1| protein of unknown function DUF140 [Thioalkalivibrio sp. HL-EbGR7]
          Length = 375

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 197/379 (51%), Gaps = 23/379 (6%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMY 60
           S  G+ V R AG      +S +  + +  +   ++S   + VD S +   D  G  L++ 
Sbjct: 13  SPKGV-VLRLAGRLDVHTVSTVWGEALAGLK--VRSGRPVRVDTSGVDYCDGAGVALVVD 69

Query: 61  FMEKYHGKIKLQGVSTHIEQLFS-LISFTHRK-KIKNQKPQRSF-FYNSFKNLHYHIGKK 117
            + +        G+    E++   L+ F  R    +   PQR         N  + +G+ 
Sbjct: 70  LLRQPRDPGAEVGLGETPEEVRRMLVPFDVRDFSGEAVPPQRGPGLKQHLANGMHDLGRY 129

Query: 118 I---VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
           +   V F+ ++ +              F A+ +  +      +      G + +P+V+LI
Sbjct: 130 LYLQVAFVGEATAAM------------FHAARHPRQVRWRDALNLAQEAGANALPIVMLI 177

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           +F+ G ++A Q A  + QFGAEIF  +L+++  LRE+  L+TA+++AGRSG+A  AEIG+
Sbjct: 178 AFLMGVILAFQSAVAMRQFGAEIFVANLVALSLLRELAPLMTAILLAGRSGAAFAAEIGT 237

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           MK+NEEI+A+ TMGLD VR L+  R+ A +  +PLLT++AN   ++G ++V+ K +DIPF
Sbjct: 238 MKVNEEINALTTMGLDPVRFLVVTRVLAAVAVMPLLTLVANLVGLVGGAVVM-KGFDIPF 296

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
             +F++  S  TL+++  GL KA      +  V    G      + ++G   T  VV +I
Sbjct: 297 VTYFNQVTSAVTLSDLLGGLFKATVFGLLVAGVGCLRGLETRSGAAAVGISTTRAVVSAI 356

Query: 355 SIVIIIDSLFAIFYFAIGI 373
            ++++ D +FA+ ++ + I
Sbjct: 357 ILIVVADGVFAVVFYHLDI 375


>gi|256828281|ref|YP_003157009.1| protein of unknown function DUF140 [Desulfomicrobium baculatum DSM
           4028]
 gi|256577457|gb|ACU88593.1| protein of unknown function DUF140 [Desulfomicrobium baculatum DSM
           4028]
          Length = 380

 Score =  167 bits (423), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 185/353 (52%), Gaps = 17/353 (4%)

Query: 17  SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EKYHGKIKLQG 73
           +PEI +    + + + + I++D     LS +T +D  GA +I+      EK    +K+ G
Sbjct: 35  TPEIMDRLAQLPLPLPRRIRAD-----LSGVTRMDDCGALVILQLRRMAEKNGCDLKMHG 89

Query: 74  VSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILG 133
              H+++L   +         +  PQ      +  +     G K +   N + +    +G
Sbjct: 90  TPGHVQELLDFLRL-------DDPPQSVGIKRAKPDFMTRFGIKTLDVTNQAVTHVSFVG 142

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
            V+           + +  L   +  M  VGV  +P+V LISF+ G ++A   A QL QF
Sbjct: 143 EVVVTLLSLLRHPDRLR--LGDTVLYMQRVGVDALPIVGLISFLLGLIMAFMSAVQLQQF 200

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           GA I+   L+++  +RE+G ++TA+++AGRSGSA  AEIG+MK++EE+DA+ TMG     
Sbjct: 201 GANIYVASLVALAMVRELGPIMTAILVAGRSGSAFAAEIGTMKVSEEVDALVTMGFKPAM 260

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            L++P+I A ++ +PLL + +N  AI G  ++     D+    + ++  +T ++ +I  G
Sbjct: 261 FLVAPKIIASVLVVPLLAMYSNLFAIAGGLLIGVTTLDLTVNAYMAQTMNTLSIFDINWG 320

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L K+   A  I  V   +G+ V   + S+G+  T+ VV  I +VI++DS+ A+
Sbjct: 321 LFKSAIFAVLIATVGCFKGYQVRGGAASVGQATTSAVVTGIFLVILVDSILAV 373


>gi|254417869|ref|ZP_05031593.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
 gi|196184046|gb|EDX79022.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
          Length = 372

 Score =  167 bits (423), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 197/374 (52%), Gaps = 18/374 (4%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAIN-KSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +G    R  G+W +  +  +   +   ++ + I+S    VD   +   DT GA   +  +
Sbjct: 13  DGTAKLRLVGDWTTTALGRLPQRLGKDLDGRKIES----VDTRDLGRFDTAGA---LALV 65

Query: 63  EKYHGKIKLQGVSTHIE--QLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
           +  H  +     +   E  +++++I    RK     K Q   F ++F      IG+ +  
Sbjct: 66  QASHCGVPKSAWTERPEAGRIYTMIEALERKSSPPPK-QPGAFTSAFAK----IGRGVYD 120

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           F  ++      LG ++    E   +    +    + + Q    G+  +P+V++ +F  GA
Sbjct: 121 FGAEAMLSLAFLGRLMEAVVEAAKNPGGIR--WPAWVSQAERAGLDAIPIVMVTNFFIGA 178

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A  G   L+ FGA++F++ L+ +   RE  V++ +V++AGRS SA  AEIGSM++N+E
Sbjct: 179 VVAFIGVDLLTDFGAQVFAVQLIGVAMFREFAVVIASVLLAGRSASAFAAEIGSMRMNQE 238

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +DA++ MG++  + L+ PR+ AL++ LPLLT +     ++G  IV W   ++  A FF R
Sbjct: 239 VDAMQVMGVNPFQALVVPRLAALVLMLPLLTFMGMIGGLLGGLIVCWSSLNLGPAFFFQR 298

Query: 301 FHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                ++A ++  GL+KAP  A  I  +  ++G +V     SLG++VT  VVQ+I  +I+
Sbjct: 299 LVEDGSMAQHMMVGLVKAPVFALVIAAIGCRQGMSVAGDVESLGRRVTAAVVQAIFAIIL 358

Query: 360 IDSLFAIFYFAIGI 373
           +D++FA+ +  + I
Sbjct: 359 LDAVFALMFLELDI 372


>gi|327399071|ref|YP_004339940.1| hypothetical protein Hipma_0911 [Hippea maritima DSM 10411]
 gi|327181700|gb|AEA33881.1| protein of unknown function DUF140 [Hippea maritima DSM 10411]
          Length = 349

 Score =  167 bits (423), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/343 (32%), Positives = 185/343 (53%), Gaps = 18/343 (5%)

Query: 31  INKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHR 90
           I K  +   AI+D+   +++DT  + L+      Y   + ++ +    +Q    I   H 
Sbjct: 25  ITKINECKPAIIDVRGASKLDT--SSLV------YLASLNIKLLLNKNDQSLLNIVLQHI 76

Query: 91  KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFK 150
            + K +K  R F Y+        +G   V+ + +       LG V      F  +  +F+
Sbjct: 77  PEKKKKKDSRGFLYS--------LGYAFVERLKELYVFMSFLGEVFVGFIGFILNPKRFR 128

Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210
             L S ++ +  +G + +P++  ISF+ GAVIA  G+ +L QFGA IF +DL+SI  LRE
Sbjct: 129 --LKSTLKDVELMGFNAIPILTTISFLIGAVIAYHGSVRLKQFGANIFVVDLVSISVLRE 186

Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
           +G L+ A+++AGRS S+  A+IG MK+ EE+D I+TMG++   IL+ P+I ++++ +PLL
Sbjct: 187 LGPLIVAILLAGRSSSSYTAQIGIMKVTEEVDVIKTMGVNPYDILVFPKIVSMLVCVPLL 246

Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330
            +LA+   ++G  +V     +I    F  R H    +    +G++KAP  A  I  +   
Sbjct: 247 IVLADVMGVLGGMVVAHLSLNITVRDFILRLHQAIGIKTFVSGILKAPAFAFLIATIGAF 306

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           +GF    +  S+GK VT  VV SI  VII D++F++ +  +GI
Sbjct: 307 KGFQTKKNVESIGKSVTVSVVDSIFGVIIADAIFSVLFRWMGI 349


>gi|302039183|ref|YP_003799505.1| putative ABC transporter permease [Candidatus Nitrospira defluvii]
 gi|300607247|emb|CBK43580.1| putative ABC-type transport system, permease component [Candidatus
           Nitrospira defluvii]
          Length = 373

 Score =  167 bits (422), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 200/368 (54%), Gaps = 27/368 (7%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINK-SIQSDSAIV-DLSAITEIDTIGAELIMY--FME- 63
            R  G W  P+++ +      A+ + +  + SA+V + S I   DT GA +++Y   ME 
Sbjct: 18  LRCRGAWTMPDVAPVER----ALRRMTWPARSALVFEASGIEAFDTGGA-VVLYRALMEA 72

Query: 64  KYHG-KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS---FFYNSFKNLHYHIGKKIV 119
           +  G ++ +QG+     QL SL+S      +    P+++    F  S +N     G   +
Sbjct: 73  RRQGCEVSIQGLRPDYAQLMSLVSSHWAAMVAEVAPRQNGSERFRASIRN-RVAQGAGAL 131

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           +F+ +S +      LV        AS  + +    S +  +   GV  +P+  L++F+ G
Sbjct: 132 EFLGESAT-----ALV-----RLVASPRRLR--WRSCLNSLRLDGVHALPITGLLTFLIG 179

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            VIA QGA QL +FG  IF +DL+ I  LREI  L+ A++IAGRSGSA  A+IG+MK+ E
Sbjct: 180 VVIAYQGAEQLRKFGTNIFIVDLVGISLLREIAPLIAAILIAGRSGSAYAAQIGTMKVTE 239

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DA++T GL  + +L+ PR+ AL+++LPLLT  A+   + G  ++     ++ F  F S
Sbjct: 240 ELDALQTFGLSPIELLVLPRVLALVVALPLLTAYADVLGVFGGMLIASNQLNVSFTAFLS 299

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           RF     L ++  GL KAPF A  I +V   +GF +    + +G+  T  VVQSI +VII
Sbjct: 300 RFEEAVALRHMLIGLGKAPFFAVIIALVGCYQGFQIRGGVDDVGRHTTISVVQSIFLVII 359

Query: 360 IDSLFAIF 367
            D++ +I 
Sbjct: 360 FDAICSIL 367


>gi|94498322|ref|ZP_01304881.1| ABC transporter, permease protein, putative [Sphingomonas sp.
           SKA58]
 gi|94422202|gb|EAT07244.1| ABC transporter, permease protein, putative [Sphingomonas sp.
           SKA58]
          Length = 303

 Score =  167 bits (422), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 90/259 (34%), Positives = 150/259 (57%), Gaps = 2/259 (0%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172
             G++++    D+       G +I   G    +  + +  +  L+  M   G++G+P+V 
Sbjct: 45  RFGRQVIGTAGDAYQMLVFTGQLIIALGRTLGNPRRLR--MTPLVAFMQDAGINGLPIVF 102

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
           +++F  GAVIA  G   L+  G E+F+I L+ +  LRE GV++TA++++GRS S+  A+I
Sbjct: 103 IMTFFIGAVIALVGTNLLTTLGVEVFTIQLVGVAILREFGVVITAILLSGRSASSFAAQI 162

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           GSM++N+E DA++ MG+D    L+ PRI A ++ +PL+T  A+   + G  +V W   DI
Sbjct: 163 GSMRMNQETDAMQVMGVDRFDALVIPRILAALLMMPLMTFCADIGGLAGGLLVSWVTIDI 222

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
               F  R   T  + + + G+ KAPF+A  I     + G  VG    SLG+ VT+ VVQ
Sbjct: 223 SPVFFIQRTLETVDIKHFWIGMCKAPFLALIIAAAGCRHGLMVGGDVQSLGQNVTSAVVQ 282

Query: 353 SISIVIIIDSLFAIFYFAI 371
           SI +VI+ D++FA+ + A+
Sbjct: 283 SIFMVIMFDAIFAVIFMAL 301


>gi|261855956|ref|YP_003263239.1| hypothetical protein Hneap_1358 [Halothiobacillus neapolitanus c2]
 gi|261836425|gb|ACX96192.1| protein of unknown function DUF140 [Halothiobacillus neapolitanus
           c2]
          Length = 413

 Score =  166 bits (421), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 193/376 (51%), Gaps = 18/376 (4%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSD-SAIVDLSAITEIDTIGAELIMYF 61
           +  +TV   +G W    +  +     ++   + ++D   IV  S ++  D  GA ++  +
Sbjct: 49  DRQVTVLVLSGTWTIHSLQHVPTLDTLSGAPTKKADKPCIVLRSEMSAFDGAGALVLARW 108

Query: 62  MEKYHG---KIKLQGVSTHIEQLFSLIS--FTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116
           +  +     ++ L         L  L+       +    +KP+       F    +H  +
Sbjct: 109 IRTWRADGFEVDLGEFPPRETSLLQLLDDRLVDTEPAPVKKPKMIARIGQFTVEQWHETR 168

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
             + F          LG ++        + ++ +    ++I ++   GV  + +V L+SF
Sbjct: 169 SFLAF----------LGELVWRGAPLLLTFWRIR--WRAVISEIDAAGVRALGIVGLLSF 216

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
           + G V+A QG   L  +GA +  +DL+ I+ LRE+G LL A+++AGR+GS+  A++G+M+
Sbjct: 217 MIGMVMAYQGGATLQNYGANVLIVDLVGIITLREMGPLLAAIIVAGRTGSSYTAQLGTMR 276

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           I EEIDA+R +G+    ILI P++ ALII+LPLL+I ++   ++G ++V    + + F+V
Sbjct: 277 ITEEIDALRAIGVPPFEILIFPKVLALIITLPLLSIFSDLMGLLGGAVVANYGFGVSFSV 336

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +F R     +L  ++ GL+K P  A  I ++   +G  V   +  +G   T  VVQ+I +
Sbjct: 337 YFDRMPEAVSLTTLWLGLLKTPVFAIVIALIGCMQGLRVRGSAAEVGHATTVSVVQAIFM 396

Query: 357 VIIIDSLFAIFYFAIG 372
           VI+ID+LF++ Y  +G
Sbjct: 397 VIVIDALFSVLYNVMG 412


>gi|322378616|ref|ZP_08053052.1| hypothetical protein HSUHS1_0274 [Helicobacter suis HS1]
 gi|322380555|ref|ZP_08054721.1| hypothetical integral membrane protein [Helicobacter suis HS5]
 gi|321147017|gb|EFX41751.1| hypothetical integral membrane protein [Helicobacter suis HS5]
 gi|321148923|gb|EFX43387.1| hypothetical protein HSUHS1_0274 [Helicobacter suis HS1]
          Length = 368

 Score =  166 bits (421), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 109/311 (35%), Positives = 168/311 (54%), Gaps = 30/311 (9%)

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
           Y+ K+ L+ V T I    S++   H  ++         F N  + L    G+ +V F N 
Sbjct: 76  YNAKV-LEVVETWIRANPSILKQEHVSRV---------FINPLEKL----GRGVVSFYNT 121

Query: 125 SCSQAHILGLVISNTG-------EFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
             +  +  G++I   G         C +          LI  ++  G   +PV IL  FV
Sbjct: 122 LLNTFNFCGMIIYYVGLAFIRPKSVCWTP---------LIHHIHESGFKVLPVSILTVFV 172

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G  IA +GA QL + G  + SI++ + L LRE+G  + A+++AGRS S+  A+IG+MKI
Sbjct: 173 VGFAIALEGAVQLQELGFPMMSIEMTAKLALREMGPFILALVVAGRSASSFTAQIGAMKI 232

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EE+DA+ TMGL+    L+ PR+ AL+I++PLL  LA+  A++GA I I     I FA +
Sbjct: 233 TEELDAMETMGLNPFAFLVLPRVVALVIAMPLLVFLADAFALLGAMIAIKYQLGIGFAHY 292

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            +R H    L++ F GLIKAPF   AI +V    GF V  ++ S+G+  T  VV S+  +
Sbjct: 293 VARLHENVGLSHFFIGLIKAPFWGFAIALVGCMRGFEVKGNTESIGQLTTISVVNSLFWI 352

Query: 358 IIIDSLFAIFY 368
           I +D+LF++ +
Sbjct: 353 IFLDALFSVIF 363


>gi|205355658|ref|ZP_03222428.1| putative ABC transport system permease protein [Campylobacter
           jejuni subsp. jejuni CG8421]
 gi|205346435|gb|EDZ33068.1| putative ABC transport system permease protein [Campylobacter
           jejuni subsp. jejuni CG8421]
          Length = 337

 Score =  166 bits (419), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 112/341 (32%), Positives = 174/341 (51%), Gaps = 24/341 (7%)

Query: 7   TVFRFAGN-------WKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
           T F+F  N       W    I ++     +A+   IQS   I D   +  IDT G    +
Sbjct: 3   TNFKFQNNTLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFL 59

Query: 60  YF---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF--FYNSFKNLHYHI 114
                ++  + KI  +G+++  + LF L    +++  K +K  ++F  ++     L   +
Sbjct: 60  ALENDLKDKNIKIAKEGLNSRFQTLFELCEKNYQRLSKTKKSHKNFSEYFIDLGKLSLEL 119

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
            K + KFIN + +    L L + N   F     +F  FL  +    +      +P+VIL 
Sbjct: 120 LKILRKFINFTGAFFTSLFLCLKNPKNF-----RFIAFLYHIENSAF----KALPIVILT 170

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           + + G V+A Q A+QL+QFGA IF +DLM I   RE+  L+ A++IAGRS S+  A+IG 
Sbjct: 171 ALLVGVVLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGV 230

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           MKI +EI A+ TMG      +I PR+ AL+I++PL+  +++  +IIG  +V     DI F
Sbjct: 231 MKITDEIAAMNTMGFRSFEFIIIPRVMALVIAMPLIVAISDAISIIGGMMVAKLNLDISF 290

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
           A F   F     + +IF GL KAP     IG++A   GF V
Sbjct: 291 AEFLRHFREAVDIKHIFIGLAKAPIFGFLIGLIACFRGFEV 331


>gi|313682999|ref|YP_004060737.1| hypothetical protein Sulku_1877 [Sulfuricurvum kujiense DSM 16994]
 gi|313155859|gb|ADR34537.1| protein of unknown function DUF140 [Sulfuricurvum kujiense DSM
           16994]
          Length = 373

 Score =  165 bits (418), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 184/364 (50%), Gaps = 30/364 (8%)

Query: 12  AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY----FMEKYHG 67
           +G+W    +S+ A ++   I  S+ +     D+S ITEID+ G  L       F E+ H 
Sbjct: 24  SGSWTIEHLSDAARELEALIPLSLVT----WDMSGITEIDSSGIALWQLTNRTFEERGH- 78

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
             +       + +LF L+           KP R     +  +  Y +GK+  +       
Sbjct: 79  TCETVNEREDLSRLFRLL---------YSKPFRDVPIPAVPSSLYRLGKETYEIFRG--- 126

Query: 128 QAHILGLVISNTGE-FCASSYKFKGFLLSLIR----QMYYVGVSGVPVVILISFVTGAVI 182
               +G  ++  GE F    Y  +   L   R     +   G   +P++ L +F+ G V+
Sbjct: 127 ----IGTFLAFLGEAFILFFYTLRHPRLIRYRSIGVHILETGARALPIIALSAFLIGVVV 182

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A Q   QL +FGA+IF +D++ I   RE+  L+TA+++AGRSGSA  A+IG+MK+ +EID
Sbjct: 183 AYQSVVQLQKFGADIFIVDMIGISLTRELAPLITAIVVAGRSGSAFTAQIGTMKMTQEID 242

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+RTMG D    L+ PR+ AL+I +PLL   A+   I G  ++   +  + F+ F  R  
Sbjct: 243 AMRTMGFDPFTFLVWPRVIALMIIMPLLIFFADMVGIFGGMVIAQVHSHLSFSEFIHRLQ 302

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L +   GLIK PF A  I  V+   GF V +++ S+G+  T  VV +I +VI  D+
Sbjct: 303 GALALKHYLIGLIKGPFFAFLIAFVSTYRGFQVSMNTESIGQYTTKSVVNAIFLVIACDA 362

Query: 363 LFAI 366
           +F++
Sbjct: 363 IFSV 366


>gi|114320361|ref|YP_742044.1| hypothetical protein Mlg_1205 [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226755|gb|ABI56554.1| protein of unknown function DUF140 [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 377

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 195/367 (53%), Gaps = 18/367 (4%)

Query: 12  AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKL 71
           +G+W    ++ +A   +  +    ++    +D SA+  +D  GA  +    E+    ++ 
Sbjct: 24  SGDWTRTGLTRLAGQDLRTLPPP-RTGGWTLDASAMGRLDLTGARQLHRLQER----LRE 78

Query: 72  QGVSTHI-----EQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
           +G S  +     E +  L++FT R        +R         L   +G++ V  +    
Sbjct: 79  RGDSVRLGEERPEHMDGLLAFTERAV-----SERRPPPPPPGPLE-RLGRQTVIRLGHFW 132

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +    +G +           +  +   LS   ++   GV  +P++ L++F+TG VIA QG
Sbjct: 133 AFLAFIGEIALEALPRLLRPWTIRWKQLSA--EIQKAGVQALPIIGLLAFLTGLVIAYQG 190

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
              L ++GA IF ++L+S+  LRE+  +LTA+++AGR+GS+  A++G+MKI EEIDA+RT
Sbjct: 191 GDTLERYGANIFLVELVSVTMLREMAPMLTAIVVAGRTGSSWAAQLGTMKITEEIDALRT 250

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +G+    +LI PR+ AL++ LPLLTI A+   I+G  +V    + +    F +R      
Sbjct: 251 LGISPFDMLILPRLMALMVVLPLLTIYADVLGILGGMLVADLMFGVAMHDFINRLPEAIA 310

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
            ++++ GL+KAP  A  I  +A  +G  V   + S+G+  T  VVQ+I +VI+ D++F+I
Sbjct: 311 TSHLWVGLVKAPVFALIIVGIACFQGMRVKGSAESVGRATTITVVQAIFLVIVTDAVFSI 370

Query: 367 FYFAIGI 373
            +  +G+
Sbjct: 371 LFNLVGL 377


>gi|289208500|ref|YP_003460566.1| hypothetical protein TK90_1322 [Thioalkalivibrio sp. K90mix]
 gi|288944131|gb|ADC71830.1| protein of unknown function DUF140 [Thioalkalivibrio sp. K90mix]
          Length = 382

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 183/335 (54%), Gaps = 14/335 (4%)

Query: 42  VDLSAITEIDTIGAELIMYF---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
           +D+  +   D  GA L+      +E+   +++L GV   +E+       T  ++++  +P
Sbjct: 59  LDVGGLEYCDGAGAALLHALERDIERAGRQVELVGVQGLVEE-----QLTPYRELETVEP 113

Query: 99  QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158
            R   + +   L     + + +    + SQ   +G +    G    +  + +       R
Sbjct: 114 AR---HETRGGLLAQSFEAVSRVGQAAYSQFGFIGELTRALGSALLNPRQVR--WGDTFR 168

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
                G   +P+V LI+F+ G ++A Q A  + QFG EIF  +L+++   RE+G L+ A+
Sbjct: 169 VAEAAGFQALPIVSLIAFLLGVILAFQSAIAMRQFGGEIFVANLVAVSLFRELGPLMMAI 228

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++AGRSG+A  AEIG+MK+NEE++A++TMGLD VR L+ P++ A I+  PLL + AN   
Sbjct: 229 LLAGRSGAAFAAEIGTMKVNEEVNALKTMGLDPVRFLVLPKVLAGILVAPLLALYANMIG 288

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           ++GA++V+ + + IP+  FF++     +L+++F+GL KA      I  V    G      
Sbjct: 289 LLGAAVVM-QGFGIPWTAFFNQVTVALSLSDLFSGLFKAVIFGLLIAGVGCLRGLQTASG 347

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           + ++G   T+ VV SI ++++ D LFA+ ++ +G+
Sbjct: 348 AAAVGISTTSAVVTSIILIVVFDGLFAVLFYHMGV 382


>gi|301057238|ref|ZP_07198367.1| conserved hypothetical protein [delta proteobacterium NaphS2]
 gi|300448689|gb|EFK12325.1| conserved hypothetical protein [delta proteobacterium NaphS2]
          Length = 352

 Score =  163 bits (413), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/329 (31%), Positives = 178/329 (54%), Gaps = 13/329 (3%)

Query: 42  VDLSAITEIDTIGAELIMYFME---KYHGKIKLQGVSTHIEQLFSLISFTHR-KKIKNQK 97
           VDL  +T +D  G  +++   +   K HG   L+     I ++   ++F    +K+  +K
Sbjct: 27  VDLENVTYLDDFGTLVLVELRKLAAKEHGAFNLENTGKKIREMLMFLNFDSLFQKVSFEK 86

Query: 98  PQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLI 157
            +R       + +   +G+K    I D       +G +  + G   A     +      +
Sbjct: 87  KRR-------QGIFVRLGEKTFDIILDLKYAISFIGAITLSLGYHLAHPRALRKD--DTL 137

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
             M   GV G+P+V LISF+ G ++A   + QL QFGA I+   L+S+   RE+G ++TA
Sbjct: 138 DYMQKTGVDGLPIVALISFLMGLIMAFMSSVQLEQFGANIYVASLVSLAMTRELGPIMTA 197

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +++AGRSGSA  AEIG+MKI+EE+DA+ TMG D V  L+ P++ A +I +P+LT+ ++  
Sbjct: 198 IIVAGRSGSAFAAEIGTMKISEEVDALYTMGFDPVGFLVIPKLIAALIMVPILTLFSDIF 257

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           AI G  +V     D+    + ++  +T  L ++F G++K+   A  I  V    GF V  
Sbjct: 258 AIAGGLLVGVFMLDLTVGAYVAQTINTLALFDVFWGVLKSGVFALLITWVGCLRGFQVSG 317

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
            + S+G+  T+ VV SI ++I+ DS+F++
Sbjct: 318 GAASVGQATTSAVVSSIFLIILFDSVFSV 346


>gi|34558310|ref|NP_908125.1| toluene ABC transporter permease [Wolinella succinogenes DSM 1740]
 gi|34484029|emb|CAE11025.1| conserved hypothetical protein-ABC-type toluene export system,
           permease component [Wolinella succinogenes]
          Length = 366

 Score =  163 bits (413), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 191/364 (52%), Gaps = 26/364 (7%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLS--AITEIDTIGAELIMYF---MEKYHG 67
           G W      E+  +++  +  + + DS  V +S   ++ +D   A L++     +++  G
Sbjct: 16  GQWDY----ELPKELISRLFLACKRDSVRVSVSLLGVSSLDYSAATLLLELSMAVKRRGG 71

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
           +   +GV   I  +  ++     K+ K   P      +S   L    G+KI + +     
Sbjct: 72  EWAWEGVPPAIAPILGIV-----KESKRDLPAPPPSLSSLLRL----GEKIKESLKGLGR 122

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV---GVSGVPVVILISFVTGAVIAQ 184
            A  LG  +   G     S      L+ L   +Y++   G+  VP++ L SF+ G V+A 
Sbjct: 123 FASFLGETLFAMGRSLKESR-----LIRLKATLYHIEESGIKAVPIIALTSFLVGIVMAY 177

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QGA QL +FGA I  +++  +L LRE+G ++ A+++AGRS S+  A+IG MKI EEIDA+
Sbjct: 178 QGAIQLEKFGASIIVVEMTGMLTLRELGPVIAAIVVAGRSASSYAAQIGVMKITEEIDAM 237

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           +TM  +    L+ PR+ AL++ +PL+  L+N + ++G  ++I  Y  I +  +  RF+  
Sbjct: 238 KTMNFNPYAFLVIPRVIALVVVMPLVIFLSNVAGLLGEMLIIKSYLGIGYLQYIERFYEM 297

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             + +++ GLIKAPF    I ++    GF +   + S+G+  T  VV +I  VI ++++F
Sbjct: 298 VEIRHLWVGLIKAPFYGAIIALIGCFRGFQITGSTESVGRYTTISVVNAIFWVIALNAMF 357

Query: 365 AIFY 368
           +I +
Sbjct: 358 SIIF 361


>gi|78777725|ref|YP_394040.1| hypothetical protein Suden_1528 [Sulfurimonas denitrificans DSM
           1251]
 gi|78498265|gb|ABB44805.1| conserved hypothetical protein [Sulfurimonas denitrificans DSM
           1251]
          Length = 373

 Score =  163 bits (412), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 87/215 (40%), Positives = 135/215 (62%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           +M    +  + ++ L SF+ G V+A Q A+QL  +GA IF +D++ +  LRE+  L+TA+
Sbjct: 159 EMNECAIKALGIISLTSFLIGVVVAYQSAYQLKLYGANIFIVDMLGLSILRELSPLITAI 218

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           +IAGRSGSA  A+IG+MKI +E+DA++TMG D  R L+ P+I AL+I++PLL  +++  A
Sbjct: 219 VIAGRSGSAFTAQIGAMKITQELDAMQTMGFDPYRFLVVPKIIALMITMPLLIFVSDIMA 278

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           IIG  IV     +I   +F  RF+    + +   G+ K PF A  I  +A+ +G  V   
Sbjct: 279 IIGGMIVANLDLNITVDMFLDRFNEVINIKHFIVGISKGPFFAFLIATIAIYQGLLVKDD 338

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           + S+G   T  VV+SI  VII D++F+I +  +GI
Sbjct: 339 TQSIGLNTTKSVVESIFAVIICDAIFSIAFTNLGI 373


>gi|217033903|ref|ZP_03439327.1| hypothetical protein HP9810_870g35 [Helicobacter pylori 98-10]
 gi|216943666|gb|EEC23111.1| hypothetical protein HP9810_870g35 [Helicobacter pylori 98-10]
          Length = 377

 Score =  163 bits (412), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 96/271 (35%), Positives = 152/271 (56%), Gaps = 13/271 (4%)

Query: 111 HYHI-----GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
           HY +     GK IVK  N   +  +  G+++     F  S++  K F ++ +  +Y++  
Sbjct: 112 HYELLITKLGKSIVKTYNTFLNAFNFCGMILFY---FIKSAFNPKRFCITPL--LYHINE 166

Query: 166 SG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           SG   +PV IL  F+ G  +A QGA QL   GA + S+++ + L LREIG  +  +++AG
Sbjct: 167 SGFKVLPVSILTVFIVGFAVALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAG 226

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           RS S+  A+IG MKI EE+DA++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G 
Sbjct: 227 RSASSFTAQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGG 286

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
              I    D+ F  +  R H T    +   G++KAPF   AI +V    GF V   + S+
Sbjct: 287 MFAIKYQLDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESI 346

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           G+  T  VV ++  +I +D++F+I +  + I
Sbjct: 347 GRLTTISVVNALFWIIFLDAVFSIIFSKLNI 377


>gi|15646075|ref|NP_208257.1| hypothetical protein HP1466 [Helicobacter pylori 26695]
 gi|2314643|gb|AAD08507.1| conserved hypothetical integral membrane protein [Helicobacter
           pylori 26695]
          Length = 377

 Score =  162 bits (410), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 96/271 (35%), Positives = 152/271 (56%), Gaps = 13/271 (4%)

Query: 111 HYHI-----GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
           HY +     GK IV+  N   +  +  G+++     F  S +  K F ++ +  +Y++  
Sbjct: 112 HYELLITKLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LYHINE 166

Query: 166 SG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           SG   +PV IL  F+ G  +A QGA QL   GA + S+++ + L LREIG  +  +++AG
Sbjct: 167 SGFKVLPVSILTVFIVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAG 226

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           RS S+  A+IG MKI EE+DA++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G 
Sbjct: 227 RSASSFTAQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGG 286

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
              I    D+ F  +  RFH T    +   G++KAPF   AI +V    GF V   + S+
Sbjct: 287 MFAIKYQLDLGFPSYIDRFHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESI 346

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           G+  T  VV ++  +I +D++F+I +  + I
Sbjct: 347 GRLTTISVVNALFWIIFLDAIFSIIFSKLNI 377


>gi|108563874|ref|YP_628190.1| hypothetical protein HPAG1_1449 [Helicobacter pylori HPAG1]
 gi|107837647|gb|ABF85516.1| ABC transport system permease [Helicobacter pylori HPAG1]
          Length = 377

 Score =  162 bits (410), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 96/271 (35%), Positives = 152/271 (56%), Gaps = 13/271 (4%)

Query: 111 HYHI-----GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
           HY +     GK IV+  N   +  +  G+++     F  S +  K F ++ +  +Y++  
Sbjct: 112 HYELLITKLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LYHINE 166

Query: 166 SG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           SG   +PV IL  F+ G  +A QGA QL   GA + S+++ + L LREIG  +  +++AG
Sbjct: 167 SGFKVLPVSILTVFIVGFAVALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAG 226

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           RS S+  A+IG MKI EE+DA++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G 
Sbjct: 227 RSASSFTAQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADSFAILGG 286

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
              I    D+ F  +  RFH T    +   G++KAPF   AI +V    GF V   + S+
Sbjct: 287 MFAIKYQLDLGFPSYIDRFHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESI 346

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           G+  T  VV ++  +I +D++F+I +  + I
Sbjct: 347 GRLTTISVVNALFWIIFLDAVFSIVFSKLNI 377


>gi|307638119|gb|ADN80569.1| organic solvent resistant ABC transporter [Helicobacter pylori 908]
 gi|325996719|gb|ADZ52124.1| putative ABC transport system, permease protein [Helicobacter
           pylori 2018]
          Length = 377

 Score =  162 bits (410), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 93/264 (35%), Positives = 150/264 (56%), Gaps = 8/264 (3%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---VP 169
            +GK +V+  N   +  +  G+++     F  S +  K F ++ +  +Y++  SG   +P
Sbjct: 119 KLGKSLVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LYHINESGFKVLP 173

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V IL  F+ G  +A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  
Sbjct: 174 VSILTVFIVGFAVALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFT 233

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A+IG MKI EE+DA++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I   
Sbjct: 234 AQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQ 293

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            D+ F  +  RFH T    +   G++KAPF   AI +V    GF V   + S+G+  T  
Sbjct: 294 LDLGFPSYIDRFHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTIS 353

Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373
           VV ++  +I +D++F+I +  + I
Sbjct: 354 VVNALFWIIFLDAIFSILFSKLNI 377


>gi|325998313|gb|ADZ50521.1| hypothetical protein hp2017_1400 [Helicobacter pylori 2017]
          Length = 377

 Score =  162 bits (410), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 93/264 (35%), Positives = 150/264 (56%), Gaps = 8/264 (3%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---VP 169
            +GK +V+  N   +  +  G+++     F  S +  K F ++ +  +Y++  SG   +P
Sbjct: 119 KLGKSLVETYNTFLNAFNFCGMILF---YFIKSVFNPKRFCITPL--LYHINESGFKVLP 173

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V IL  F+ G  +A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  
Sbjct: 174 VSILTVFIVGFAVALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFT 233

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A+IG MKI EE+DA++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I   
Sbjct: 234 AQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQ 293

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            D+ F  +  RFH T    +   G++KAPF   AI +V    GF V   + S+G+  T  
Sbjct: 294 LDLGFPSYIDRFHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTIS 353

Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373
           VV ++  +I +D++F+I +  + I
Sbjct: 354 VVNALFWIIFLDAIFSILFSKLNI 377


>gi|308062730|gb|ADO04618.1| putative ABC transport system permease protein [Helicobacter pylori
           Cuz20]
          Length = 377

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 178/337 (52%), Gaps = 15/337 (4%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLIS--FTHRKKIKNQKPQ 99
           VD S   +ID +    +   +++    I+L  VS +      ++       + ++++K  
Sbjct: 51  VDFSGCQKIDFVFGMFLFDLVKERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAS 110

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
           + +     + +   +GK IVK  N   +  +  G+++     F  S +  K F ++ +  
Sbjct: 111 KRY-----ELMITKLGKSIVKTYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL-- 160

Query: 160 MYYVGVSG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +Y++  SG   +PV IL  F+ G  +A QGA QL   GA + S+++ + L LREIG  + 
Sbjct: 161 LYHINESGFKVLPVSILTVFIVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFIL 220

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
            +++AGRS S+  A+IG MKI EE+DA++TMG +    L+ PR+ AL+I LPLL  +A+ 
Sbjct: 221 TLVVAGRSASSFTAQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADA 280

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            AI+G    I    D+ F  +  R H T    +   G++KAPF   AI +V    GF V 
Sbjct: 281 FAILGGMFAIKYQLDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVK 340

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
             + S+G+  T  VV ++  +I +D++F+I +  + I
Sbjct: 341 GDTESIGRLTTISVVNALFWIIFLDAVFSIIFSKLNI 377


>gi|317011599|gb|ADU85346.1| putative ABC transport system permease protein [Helicobacter pylori
           SouthAfrica7]
          Length = 377

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/264 (35%), Positives = 150/264 (56%), Gaps = 8/264 (3%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---VP 169
            +GK IV+  N   +  +  G+++     F  S +  K F ++ +  +Y++  SG   +P
Sbjct: 119 KLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LYHINESGFKVLP 173

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V IL  F+ G  +A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  
Sbjct: 174 VSILTVFIVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFT 233

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A+IG MKI EE+DA++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I   
Sbjct: 234 AQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQ 293

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            D+ F  +  RFH T    +   G++KAPF   AI +V    GF V   + S+G+  T  
Sbjct: 294 LDLGFPSYIDRFHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTIS 353

Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373
           VV ++  +I +D++F+I +  + I
Sbjct: 354 VVNALFWIIFLDAIFSIVFSKLNI 377


>gi|308185234|ref|YP_003929367.1| putative ABC transport system permease protein [Helicobacter pylori
           SJM180]
 gi|308061154|gb|ADO03050.1| putative ABC transport system permease protein [Helicobacter pylori
           SJM180]
          Length = 377

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 175/335 (52%), Gaps = 11/335 (3%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
           VD S   +ID +    +   + +    I+L  VS +      ++     K+   +  + S
Sbjct: 51  VDFSGCQKIDFVFGMFLFDLVRERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAS 110

Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY 161
                ++ L   +GK +V+  N   +  +  G+++     F  S +  K F ++ +  +Y
Sbjct: 111 ---KQYELLITKLGKSLVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LY 162

Query: 162 YVGVSG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           ++  SG   +PV IL  F+ G  +A QGA QL   GA + S+++ + L LREIG  +  +
Sbjct: 163 HINESGFKVLPVSILTVFIVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTL 222

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++AGRS S+  A+IG MKI EE+DA++TMG +    L+ PR+ AL+I LPLL  +A+  A
Sbjct: 223 VVAGRSASSFTAQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFA 282

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           I+G    I    D+ F  +  R H T    +   G++KAPF   AI +V    GF V   
Sbjct: 283 ILGGMFAIKYQLDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGD 342

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           + S+G+  T  VV ++  +I +D++F+I +  + I
Sbjct: 343 TESIGRLTTISVVNALFWIIFLDAIFSILFSKLNI 377


>gi|296134762|ref|YP_003642004.1| protein of unknown function DUF140 [Thiomonas intermedia K12]
 gi|295794884|gb|ADG29674.1| protein of unknown function DUF140 [Thiomonas intermedia K12]
          Length = 380

 Score =  160 bits (406), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 192/364 (52%), Gaps = 20/364 (5%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66
           V R  G W +  ++   +  + A  + +  D++       T +DT GA L++  M ++  
Sbjct: 29  VCRLQGAWNAQGLAREPNTHLPAGTRHVTLDASA------TTLDTPGALLLVRSMAQWQS 82

Query: 67  --GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
               + + G+S   +QL  L+    R++     P           L   IG+  +  +++
Sbjct: 83  AGATVDVSGLSPPQQQLLDLV----RQRALALPPAARRL-----GLLGDIGRATLIALDE 133

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +    +G ++          ++ +     +I ++   G+  + ++ L+SF+ G V+A 
Sbjct: 134 LRALLAFVGELVWRGAPLLLQPWRVRWR--EVIHEIDAAGLRAIGIIGLLSFLIGMVMAY 191

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q    L+ +GA I  ++L+SI+ LRE+G LLTA+++AGR+GS+  A+IG+M+I EE+DA+
Sbjct: 192 QAGATLATYGANILIVNLVSIITLRELGPLLTAILVAGRTGSSYTAQIGTMRITEEVDAL 251

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R +GL    +L+ P++ AL+I+LPLL + A+   + G  +V    Y +P + + +R    
Sbjct: 252 RALGLSPFEMLVLPKVIALVITLPLLALFADVMGLAGGGVVAAVGYGVPLSEYVARIPQV 311

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L  +  GL+KAP  A  I +V   +G  V   + ++G+  T  VVQ+I +VI+ID+ F
Sbjct: 312 VGLKTLVLGLVKAPVFAVVIALVGCMQGLRVAGSAAAVGRATTVSVVQAIFLVIVIDASF 371

Query: 365 AIFY 368
           ++ Y
Sbjct: 372 SVLY 375


>gi|317181149|dbj|BAJ58935.1| hypothetical protein HPF32_1353 [Helicobacter pylori F32]
          Length = 377

 Score =  160 bits (406), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 175/335 (52%), Gaps = 11/335 (3%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
           VD S   +ID +    +   + +    I+L  VS +      ++     K+   +  + S
Sbjct: 51  VDFSGCQKIDFVFGMFLFDLVRERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKES 110

Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY 161
                ++ +   +GK IV+  N   +  +  G+++     F  S +  K F ++ +  +Y
Sbjct: 111 ---KKYELMITKLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LY 162

Query: 162 YVGVSG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           ++  SG   +P+ IL  F+ G  +A QGA QL   GA + S+++ + L LREIG  +  +
Sbjct: 163 HINESGFKVLPISILTVFIVGFAVALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTL 222

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++AGRS S+  A+IG MKI EE+DA++TMG +    L+ PR+ AL+I LPLL  +A+  A
Sbjct: 223 VVAGRSASSFTAQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFA 282

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           I+G    I    D+ F  +  R H T    +   G++KAPF   AI +V    GF V   
Sbjct: 283 ILGGMFAIKYQLDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGD 342

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           + S+G+  T  VV ++  +I +D++F+I +  + I
Sbjct: 343 TESIGRLTTISVVNALFWIIFLDAVFSIIFSKLNI 377


>gi|317179642|dbj|BAJ57430.1| hypothetical protein HPF30_1333 [Helicobacter pylori F30]
          Length = 377

 Score =  160 bits (406), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 178/337 (52%), Gaps = 15/337 (4%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLIS--FTHRKKIKNQKPQ 99
           VD S   +ID +    +   +++    I+L  VS +      ++       + ++++K  
Sbjct: 51  VDFSGCQKIDFVFGMFLFDLVKERSLDIELCNVSENNACALKVVKDWLEKEEDLESKKAG 110

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
           + +     + L   +GK IV+  N   +  +  G+++     F  S +  K F ++ +  
Sbjct: 111 KHY-----ELLITKLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL-- 160

Query: 160 MYYVGVSG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +Y++  SG   +PV IL  F+ G  +A QGA QL   GA + S+++ + L LREIG  + 
Sbjct: 161 LYHINESGFKVLPVSILTVFIVGFAVALQGALQLQDLGAPLMSVEMTAKLALREIGPFIL 220

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
            +++AGRS S+  A+IG MKI EE+DA++TMG +    L+ PR+ AL+I LPLL  +A+ 
Sbjct: 221 TLVVAGRSASSFTAQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADA 280

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            AI+G    I    D+ F  +  R H T    +   G++KAPF   AI +V    GF V 
Sbjct: 281 FAILGGMFAIKYQLDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVK 340

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
             + S+G+  T  VV ++  +I +D++F+I +  + I
Sbjct: 341 GDTESIGRLTTISVVNALFWIIFLDAVFSIIFSKLNI 377


>gi|157165030|ref|YP_001466748.1| MTA/SAH nucleosidase [Campylobacter concisus 13826]
 gi|112799982|gb|EAT97326.1| ABC transport system permease [Campylobacter concisus 13826]
          Length = 368

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 194/369 (52%), Gaps = 22/369 (5%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           NG    +FAG +   +   +      +I K IQ     V     +E+ +I   +++    
Sbjct: 13  NGTATIKFAGEFSYKDAKNL-----QSIFKKIQKLKGNVKFD-FSELKSIDYAVLILLKN 66

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKI--KNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
             +GK K + + T+ E++ ++    + +KI  K   P  S       N    +G+KI + 
Sbjct: 67  TLNGK-KFE-IITNDEKIKAMSDLLNDEKIDFKYMPPHNSL------NFFSRLGEKICEG 118

Query: 122 INDSCSQAHILG--LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
             +       LG  L+ S    F  ++ +F+ F  + I+     GV+ V +V L +F+ G
Sbjct: 119 FVNLLEFGSFLGEFLIKSVRILFNPANLRFREFS-NYIKDG---GVNAVFIVSLTAFLIG 174

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A  G+  L+ FGA IF +++M +L LRE+  L+ A+++AGRS S+  A+IG+MK+ E
Sbjct: 175 VVLAYLGSAMLASFGASIFIVEIMGMLTLREVAPLIAAIVVAGRSASSFTAQIGAMKLTE 234

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDA++TMG +    L+ PRI A+++ +P++  +A+  +I+G  I+     DI F+ + +
Sbjct: 235 EIDAMKTMGFEPFNFLVLPRIIAMVLCVPVIIFIADSISILGQMIICQTILDISFSDYLN 294

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           RF     L +   G+IKAPF    I I+    GF V  ++ SLG   T  VV +I  VI 
Sbjct: 295 RFREMVELRHFAVGMIKAPFFGAVIAIIGCMRGFGVSQNAQSLGAMTTVSVVNAIFWVIA 354

Query: 360 IDSLFAIFY 368
           +D+ FAI +
Sbjct: 355 LDAFFAIIF 363


>gi|208435334|ref|YP_002267000.1| ABC transport system permease [Helicobacter pylori G27]
 gi|208433263|gb|ACI28134.1| ABC transport system permease [Helicobacter pylori G27]
          Length = 377

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 93/264 (35%), Positives = 149/264 (56%), Gaps = 8/264 (3%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---VP 169
            +GK IV+  N   +  +  G+++     F  S +  K F ++ +  +Y++  SG   +P
Sbjct: 119 KLGKSIVETCNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LYHINESGFKVLP 173

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V IL  F+ G  +A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  
Sbjct: 174 VSILTVFIVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFT 233

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A+IG MKI EE+DA++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I   
Sbjct: 234 AQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQ 293

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            D+ F  +  R H T    +   G++KAPF   AI +V    GF V   + S+G+  T  
Sbjct: 294 LDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTIS 353

Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373
           VV ++  +I +D++F+I +  + I
Sbjct: 354 VVNALFWIIFLDAIFSILFSKLNI 377


>gi|308183565|ref|YP_003927692.1| putative ABC transport system permease protein [Helicobacter pylori
           PeCan4]
 gi|308065750|gb|ADO07642.1| putative ABC transport system permease protein [Helicobacter pylori
           PeCan4]
          Length = 377

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 93/264 (35%), Positives = 149/264 (56%), Gaps = 8/264 (3%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---VP 169
            +GK IV+  N   +  +  G+++     F  S +  K F ++ +  +Y++  SG   +P
Sbjct: 119 KLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LYHINESGFKVLP 173

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V IL  F+ G  +A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  
Sbjct: 174 VSILTVFIVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFT 233

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A+IG MKI EE+DA++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I   
Sbjct: 234 AQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQ 293

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            D+ F  +  R H T    +   G++KAPF   AI +V    GF V   + S+G+  T  
Sbjct: 294 LDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTIS 353

Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373
           VV ++  +I +D++F+I +  + I
Sbjct: 354 VVNALFWIIFLDAIFSILFSKLNI 377


>gi|254779978|ref|YP_003058085.1| ABC-type transport system, permease; putative membrane protein
           [Helicobacter pylori B38]
 gi|254001891|emb|CAX30141.1| ABC-type transport system, permease; putative membrane protein
           [Helicobacter pylori B38]
          Length = 377

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/271 (35%), Positives = 151/271 (55%), Gaps = 13/271 (4%)

Query: 111 HYHI-----GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
           HY +     GK IV+  N   +  +  G+++     F  S +  K F ++ +  +Y++  
Sbjct: 112 HYELLITKLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LYHINE 166

Query: 166 SG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           SG   +PV IL  F+ G  +A QG  QL   GA + S+++ + L LREIG  +  +++AG
Sbjct: 167 SGFKVLPVSILTVFIVGFAVALQGTLQLQDMGAPLVSVEMTAKLALREIGPFILTLVVAG 226

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           RS S+  A+IG MKI EE+DA++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G 
Sbjct: 227 RSASSFTAQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGG 286

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
              I    D+ F  +  RFH T    +   G++KAPF   AI +V    GF V   + S+
Sbjct: 287 MFAIKYQLDLGFPSYIDRFHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESI 346

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           G+  T  VV ++  +I +D++F+I +  + I
Sbjct: 347 GRLTTISVVNALFWIIFLDAIFSIVFSKLNI 377


>gi|317010161|gb|ADU80741.1| putative ABC transport system permease protein [Helicobacter pylori
           India7]
          Length = 377

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 93/264 (35%), Positives = 150/264 (56%), Gaps = 8/264 (3%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---VP 169
            +GK IV+  N   +  +  G+++     F  S +  K F ++ +  +Y++  SG   +P
Sbjct: 119 KLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LYHINESGFKVLP 173

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V IL  F+ G  +A QGA QL + GA + S+++ + L LREIG  +  +++AGRS S+  
Sbjct: 174 VSILTVFIVGFAVALQGALQLQEMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFT 233

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A+IG MKI EE+DA++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I   
Sbjct: 234 AQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAINYQ 293

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            D+ F  +  R H T    +   G++KAPF   AI +V    GF V   + S+G+  T  
Sbjct: 294 LDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTIS 353

Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373
           VV ++  +I +D++F+I +  + I
Sbjct: 354 VVNALFWIIFLDAVFSIIFSKLNI 377


>gi|298735565|ref|YP_003728086.1| putative ABC transport system permease protein [Helicobacter pylori
           B8]
 gi|298354750|emb|CBI65622.1| putative ABC transport system permease protein [Helicobacter pylori
           B8]
          Length = 377

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 93/264 (35%), Positives = 150/264 (56%), Gaps = 8/264 (3%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---VP 169
            +GK IV+  N   +  +  G+++     F  S +  K F ++ +  +Y++  SG   +P
Sbjct: 119 KLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LYHINESGFKVLP 173

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V IL  F+ G  +A QG  QL   GA + S+++ + L LREIG  +  +++AGRS S+  
Sbjct: 174 VSILTVFIVGFAVALQGVLQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFT 233

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A+IG MKI EE+DA++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I   
Sbjct: 234 AQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQ 293

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            D+ F+ +  RFH T    +   G++KAPF   AI +V    GF V   + S+G+  T  
Sbjct: 294 LDLGFSSYIDRFHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTIS 353

Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373
           VV ++  +I +D++F+I +  + I
Sbjct: 354 VVNALFWIIFLDAVFSIVFSKLNI 377


>gi|254524872|ref|ZP_05136927.1| ABC transporter permease [Stenotrophomonas sp. SKA14]
 gi|219722463|gb|EED40988.1| ABC transporter permease [Stenotrophomonas sp. SKA14]
          Length = 370

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 123/366 (33%), Positives = 204/366 (55%), Gaps = 21/366 (5%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           + R +G W + + +  A +V+  + + +      +D + I ++D+ G   ++  +   H 
Sbjct: 18  LIRLSGTW-TLKTALAAAEVLRGVPEKLTG----IDATGIEQMDSAG---VLQVLRVAH- 68

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQ-KPQRSF-FYNSFKNL--HYHIGKKIVKFIN 123
           +  L   + H  Q    +  T  +   ++ KP+R F    + + L    H     +K + 
Sbjct: 69  RADLGEDALHFRQDHQALVCTIEEVADDRPKPKRDFGVLAALERLGVSVHATGHNIKAL- 127

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
             CS    LG  +           +F+  L + + QM  VG+  VP+V L+S++ GAVIA
Sbjct: 128 --CS---FLGENLVKAARLVKEPRRFR--LTATVHQMEQVGLDAVPLVALLSYLVGAVIA 180

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
             G+  L  FGAEI+ ++L++I  LRE  VLLTA+++AGR+ SA  A+IG+MK  EEIDA
Sbjct: 181 FLGSTILRDFGAEIYVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKAREEIDA 240

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +RT+GLD V +L+ PR+ AL+++LPLLT +A  + + G   V     DIP  ++ +R H 
Sbjct: 241 MRTLGLDPVDLLVLPRLLALLVTLPLLTFIAMVAGLAGGITVGAFDLDIPPQMYIARMHE 300

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
           T  + ++  GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VIIID+ 
Sbjct: 301 TMEVRHMLVGLSKAPVFALVIGLIGCLEGLKVEGTAQSVGERTTSSVVQTISLVIIIDAF 360

Query: 364 FAIFYF 369
            A+++ 
Sbjct: 361 AALWFM 366


>gi|315639122|ref|ZP_07894289.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Campylobacter upsaliensis JV21]
 gi|315480826|gb|EFU71463.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Campylobacter upsaliensis JV21]
          Length = 368

 Score =  160 bits (404), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 117/372 (31%), Positives = 186/372 (50%), Gaps = 30/372 (8%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFMEKYHGKI 69
           G W     + IAD  +    K  Q+   I+D   +  ID  G    +   Y ++K     
Sbjct: 16  GIWDK---NSIADFKITDFIKKFQT-QCILDFHHLEFIDMAGVRFFLALEYELQKRGIVS 71

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
           +   +S   + LF L    +++ +K  K             H+   +    F+N      
Sbjct: 72  QRVHLSEKFDALFELCEKNYQRILKEPKK------------HFDTAEL---FVNLGVLSL 116

Query: 130 HILGLV---ISNTGEFCASSYKF--KGFLLSLIRQMYYV---GVSGVPVVILISFVTGAV 181
           ++LG++   I   GEF  + +++  K      I  +Y++    +  +P+VIL + + G V
Sbjct: 117 NLLGILKQFICFVGEFFTAFFQYFKKPKAFRFIAFLYHIENSALKALPIVILTALLVGVV 176

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A Q AFQL+QFGA IF +DL+ I   RE+  L+ A++IAGRS S+  A+IG MKI +EI
Sbjct: 177 LAYQAAFQLAQFGANIFIVDLVGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEI 236

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
            A+ TMG      +I PR+ AL++++PL+  +++F +I G  +V     DI F  F  RF
Sbjct: 237 AAMNTMGFSTFHFIIIPRVIALVVAMPLIVAVSDFVSIFGGMMVAHLNLDINFIEFLRRF 296

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                L ++  GLIKAP     IG++A   G  V   + S+G   T  VV +I  VI  D
Sbjct: 297 KEAVDLKHVIIGLIKAPIFGFLIGLIACFRGLEVKHTTQSIGIYTTKSVVNAIFWVIAFD 356

Query: 362 SLFAIFYFAIGI 373
           +LF++    +GI
Sbjct: 357 ALFSVILTQMGI 368


>gi|294338723|emb|CAZ87055.1| putative ABC-type transport system, permease component [Thiomonas
           sp. 3As]
          Length = 380

 Score =  160 bits (404), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 191/364 (52%), Gaps = 20/364 (5%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66
           V R  G W +  ++   +  + A  + +  D++       T +DT GA L++  M ++  
Sbjct: 29  VCRLQGAWNAQGLAREPNTHLPAGTRHVTLDASA------TTLDTPGALLLVRSMAQWQS 82

Query: 67  --GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
               +   G+S   +QL  L+    R++     P           L   IG+  +  +++
Sbjct: 83  AGATVDASGLSPPQQQLLDLV----RQRALALPPAARRL-----GLLGDIGRATLIALDE 133

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +    +G ++          ++ +     +I ++   G+  + ++ L+SF+ G V+A 
Sbjct: 134 LRALLAFVGELVWRGAPLLLQPWRVRWR--EVIHEIDAAGLRAIGIIGLLSFLIGMVMAY 191

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q    L+ +GA I  ++L+SI+ LRE+G LLTA+++AGR+GS+  A+IG+M+I EE+DA+
Sbjct: 192 QAGATLATYGANILIVNLVSIITLRELGPLLTAILVAGRTGSSYTAQIGTMRITEEVDAL 251

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R +GL    +L+ P++ AL+I+LPLL + A+   + G  +V    Y +P + + +R    
Sbjct: 252 RALGLSPFEMLVLPKVIALVITLPLLALFADVMGLAGGGVVAAVGYGVPLSEYVARIPQV 311

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L  +  GL+KAP  A  I +V   +G  V   + ++G+  T  VVQ+I +VI+ID+ F
Sbjct: 312 VGLKTLVLGLVKAPVFAVVIALVGCMQGLRVAGSAAAVGRATTVSVVQAIFLVIVIDASF 371

Query: 365 AIFY 368
           ++ Y
Sbjct: 372 SVLY 375


>gi|154149262|ref|YP_001406165.1| ABC transport system permease [Campylobacter hominis ATCC BAA-381]
 gi|153805271|gb|ABS52278.1| ABC transport system permease [Campylobacter hominis ATCC BAA-381]
          Length = 367

 Score =  160 bits (404), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 89/205 (43%), Positives = 124/205 (60%)

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G+  V +V L +F+ G V+A  G+  L+QFGA I+ ID+M +L LREI  L+ A++IAGR
Sbjct: 158 GIDAVFIVSLTAFLVGIVLAYIGSDMLAQFGASIYIIDIMGMLTLREIAPLIAAIVIAGR 217

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           S S+  A+IG MKI EEIDA++TMG D    L  PRI A+II  P +  LA+  +I    
Sbjct: 218 SASSFTAQIGVMKITEEIDAMKTMGFDPFYFLCMPRILAMIIITPFVIFLADAVSIFSQM 277

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           IV   Y +I FA +  RF ST  + +   G++KAPF    I IV    GF V   + S+G
Sbjct: 278 IVCDAYLEISFADYLERFKSTIEIRHFLVGIVKAPFFGAIIAIVGCLRGFEVKNDTQSIG 337

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFY 368
           +  T  VV +I  VI +D+ FA+ +
Sbjct: 338 EYTTISVVNAIFWVIALDAFFAVMF 362


>gi|261838741|gb|ACX98507.1| ABC transport system permease [Helicobacter pylori 51]
          Length = 377

 Score =  160 bits (404), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 177/337 (52%), Gaps = 15/337 (4%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLIS--FTHRKKIKNQKPQ 99
           VD S   +ID +    +   + +    I+L  VS +      ++       + ++++K  
Sbjct: 51  VDFSGCQKIDFVFGMFLFDLVRERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAG 110

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
           + +     + +   +GK IV+  N   +  +  G+++     F  S +  K F ++ +  
Sbjct: 111 KKY-----ELMITKLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL-- 160

Query: 160 MYYVGVSG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +Y++  SG   +PV IL  F+ G  +A QGA QL   GA + S+++ + L LREIG  + 
Sbjct: 161 LYHINESGFKVLPVSILTVFIVGFAVALQGALQLQDLGAPLMSVEMTAKLALREIGPFIL 220

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
            +++AGRS S+  A+IG MKI EE+DA++TMG +    L+ PR+ AL+I LPLL  +A+ 
Sbjct: 221 TLVVAGRSASSFTAQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADA 280

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            AI+G    I    D+ F  +  R H T    +   G++KAPF   AI +V    GF V 
Sbjct: 281 FAILGGMFAIKYQLDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVK 340

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
             + S+G+  T  VV ++  +I +D++F+I +  + I
Sbjct: 341 GDTESIGRLTTISVVNALFWIIFLDAVFSIIFSKLNI 377


>gi|15612424|ref|NP_224077.1| hypothetical protein jhp1359 [Helicobacter pylori J99]
 gi|4155971|gb|AAD06935.1| putative [Helicobacter pylori J99]
          Length = 377

 Score =  160 bits (404), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 93/264 (35%), Positives = 148/264 (56%), Gaps = 8/264 (3%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---VP 169
            +GK +V+  N   +  +  G+++     F  S +  K F   +I  +Y++  SG   +P
Sbjct: 119 KLGKSLVETYNTFLNAFNFCGMILFY---FIKSVFNPKRF--CIIPLLYHINESGFKVLP 173

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V IL  F+ G  +A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  
Sbjct: 174 VSILTVFIVGFAVALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFT 233

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A+IG MKI EE+DA++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I   
Sbjct: 234 AQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQ 293

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            D+ F  +  R H T    +   G++KAPF   AI +V    GF V   + S+G+  T  
Sbjct: 294 LDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTIS 353

Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373
           VV ++  +I +D++F+I +  + I
Sbjct: 354 VVNALFWIIFLDAIFSILFSKLNI 377


>gi|210135633|ref|YP_002302072.1| ABC transporter permease protein [Helicobacter pylori P12]
 gi|210133601|gb|ACJ08592.1| ABC transporter permease protein [Helicobacter pylori P12]
          Length = 377

 Score =  160 bits (404), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 95/271 (35%), Positives = 151/271 (55%), Gaps = 13/271 (4%)

Query: 111 HYHI-----GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
           HY +     GK IV+  N   +  +  G+++     F  S +  K F ++ +  +Y++  
Sbjct: 112 HYELLITKLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LYHINE 166

Query: 166 SG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           SG   +PV IL  F+ G  +A QGA QL   GA + S+++ + L LREIG  +  +++AG
Sbjct: 167 SGFKVLPVSILTVFIVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAG 226

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           RS S+  A+IG MKI EE+DA++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G 
Sbjct: 227 RSASSFTAQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGG 286

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
              I    D+ F  +  R H T    +   G++KAPF   AI +V    GF V   + S+
Sbjct: 287 MFAIKYQLDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESI 346

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           G+  T  VV ++  +I +D++F+I +  + I
Sbjct: 347 GRLTTISVVNALFWIIFLDAVFSIVFSKLNI 377


>gi|257459529|ref|ZP_05624638.1| ABC transport system permease [Campylobacter gracilis RM3268]
 gi|257442954|gb|EEV18088.1| ABC transport system permease [Campylobacter gracilis RM3268]
          Length = 367

 Score =  160 bits (404), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 88/210 (41%), Positives = 130/210 (61%)

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G+  + +V L +F+ G V+A  G+  LS+FGA I+ ID+M  L LRE+  L+ A++IAGR
Sbjct: 158 GIDALFIVSLTAFLIGIVLAYIGSDMLSKFGASIYIIDIMGALTLREVAPLIAAIVIAGR 217

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           S S+  A+IG MKI EEIDA+RTMG D    L  PRI A+++ +PL+  +A+  +I    
Sbjct: 218 SASSFTAQIGVMKITEEIDAMRTMGFDPFYFLAMPRIIAMVLIMPLVIFIADSVSIFAQM 277

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           IV   Y DI F+ +  RF ++  L +   G+IKAPF    I I+    GF V  ++ S+G
Sbjct: 278 IVCDAYLDIAFSDYLDRFKASVELRHFLVGMIKAPFFGAFIAIIGCMRGFEVKGNTQSIG 337

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           +  T  VV +I  VI ID++FA+ +  IG+
Sbjct: 338 EYTTISVVNAIFWVIAIDAVFAVLFSEIGL 367


>gi|217031805|ref|ZP_03437308.1| hypothetical protein HPB128_199g13 [Helicobacter pylori B128]
 gi|216946457|gb|EEC25059.1| hypothetical protein HPB128_199g13 [Helicobacter pylori B128]
          Length = 367

 Score =  160 bits (404), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 93/264 (35%), Positives = 150/264 (56%), Gaps = 8/264 (3%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---VP 169
            +GK IV+  N   +  +  G+++     F  S +  K F ++ +  +Y++  SG   +P
Sbjct: 109 KLGKSIVETYNTFLNAFNFCGMILF---YFIKSVFNPKRFCITPL--LYHINESGFKVLP 163

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V IL  F+ G  +A QG  QL   GA + S+++ + L LREIG  +  +++AGRS S+  
Sbjct: 164 VSILTVFIVGFAVALQGVLQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFT 223

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A+IG MKI EE+DA++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I   
Sbjct: 224 AQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQ 283

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            D+ F+ +  RFH T    +   G++KAPF   AI +V    GF V   + S+G+  T  
Sbjct: 284 LDLGFSSYIDRFHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTIS 343

Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373
           VV ++  +I +D++F+I +  + I
Sbjct: 344 VVNALFWIIFLDAVFSIVFSKLNI 367


>gi|207091861|ref|ZP_03239648.1| hypothetical protein HpylHP_01931 [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 377

 Score =  160 bits (404), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 95/271 (35%), Positives = 151/271 (55%), Gaps = 13/271 (4%)

Query: 111 HYHI-----GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
           HY +     GK IV+  N   +  +  G+++     F  S +  K F ++ +  +Y++  
Sbjct: 112 HYELLITKLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LYHINE 166

Query: 166 SG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           SG   +PV IL  F+ G  +A QGA QL   GA + S+++ + L LREIG  +  +++AG
Sbjct: 167 SGFKVLPVSILTVFIVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAG 226

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           RS S+  A+IG MKI EE+DA++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G 
Sbjct: 227 RSASSFTAQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGG 286

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
              I    D+ F  +  R H T    +   G++KAPF   AI +V    GF V   + S+
Sbjct: 287 MFAIKYQLDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESI 346

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           G+  T  VV ++  +I +D++F+I +  + I
Sbjct: 347 GRLTTISVVNALFWIIFLDAVFSIVFSKLNI 377


>gi|154173911|ref|YP_001408228.1| stas domain-containing protein [Campylobacter curvus 525.92]
 gi|112802195|gb|EAT99539.1| stas domain protein [Campylobacter curvus 525.92]
          Length = 368

 Score =  159 bits (403), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 84/205 (40%), Positives = 130/205 (63%)

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           GV+ V +V L +F+ G V+A  G+  L+ FGA IF +++M +L LRE+  L+ A+++AGR
Sbjct: 159 GVNAVFIVSLTAFLIGVVLAYLGSAMLANFGASIFIVEIMGMLTLREVAPLIAAIVVAGR 218

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           S S+  A+IG+MK+ EEIDA++TMG +    L+ PRI A+++SLP++  +A+  +I+G  
Sbjct: 219 SASSFTAQIGAMKLTEEIDAMKTMGFEPFNFLVLPRIIAMVLSLPIIIFIADAISILGQM 278

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           ++     DI FA + SRF     L +   G+IKAPF    I I+    GF V  ++ SLG
Sbjct: 279 LICQGVLDISFADYLSRFKDMVELRHFAVGMIKAPFFGAIIAIIGCMRGFDVNSNAQSLG 338

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFY 368
           +  T  VV +I  VI +D+ FAI +
Sbjct: 339 EMTTISVVNAIFWVIALDAFFAIIF 363


>gi|317178170|dbj|BAJ55959.1| hypothetical protein HPF16_1362 [Helicobacter pylori F16]
          Length = 377

 Score =  159 bits (403), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 178/337 (52%), Gaps = 15/337 (4%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLIS--FTHRKKIKNQKPQ 99
           VD S   +ID +    +   +++    I+L  VS +      ++       + ++++K  
Sbjct: 51  VDFSGCQKIDFVFGMFLFDLVKERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKEG 110

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
           + +     + +   +GK IV+  N   +  +  G+++     F  S +  K F ++ +  
Sbjct: 111 KKY-----ELMITKLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL-- 160

Query: 160 MYYVGVSG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +Y++  SG   +P+ IL  F+ G  +A QGA QL   GA + S+++ + L LREIG  + 
Sbjct: 161 LYHINESGFKVLPISILTVFIVGFAVALQGALQLQDLGAPLMSVEMTAKLALREIGPFIL 220

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
            +++AGRS S+  A+IG MKI EE+DA++TMG +    L+ PR+ AL+I LPLL  +A+ 
Sbjct: 221 TLVVAGRSASSFTAQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADA 280

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            AI+G    I    D+ F  +  R H T    +   G++KAPF   AI +V    GF V 
Sbjct: 281 FAILGGMFAIKYQLDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVK 340

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
             + S+G+  T  VV ++  +I +D++F+I +  + I
Sbjct: 341 GDTESIGRLTTISVVNALFWIIFLDAVFSIIFSKLNI 377


>gi|297380678|gb|ADI35565.1| conserved hypothetical protein [Helicobacter pylori v225d]
          Length = 377

 Score =  159 bits (403), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 93/264 (35%), Positives = 149/264 (56%), Gaps = 8/264 (3%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---VP 169
            +GK IV+  N   +  +  G+++     F  S +  K F ++ +  +Y++  SG   +P
Sbjct: 119 KLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LYHINESGFKVLP 173

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V IL  F+ G  +A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  
Sbjct: 174 VSILTVFIVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFT 233

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A+IG MKI EE+DA++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I   
Sbjct: 234 AQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQ 293

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            D+ F  +  R H T    +   G++KAPF   AI +V    GF V   + S+G+  T  
Sbjct: 294 LDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTIS 353

Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373
           VV ++  +I +D++F+I +  + I
Sbjct: 354 VVNALFWIIFLDAVFSIIFSKLNI 377


>gi|301060039|ref|ZP_07200913.1| conserved hypothetical protein [delta proteobacterium NaphS2]
 gi|300445918|gb|EFK09809.1| conserved hypothetical protein [delta proteobacterium NaphS2]
          Length = 376

 Score =  159 bits (403), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 187/384 (48%), Gaps = 28/384 (7%)

Query: 1   MSENGITVFRFAGNWKS----PEISEIADDVVMAIN-KSIQSDSAIVDLSAITEIDTIGA 55
           ++E+        GNW+     P    + D +    + K I+ D+        TE+ +  +
Sbjct: 10  LTESETLTVHLQGNWQMESGVPSSGALLDQLDQHSSIKRIEFDA--------TELGSWDS 61

Query: 56  ELIMYFME------KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
            L ++F E      +   K++  G+   + QL  L +   +K+   Q   R+ F+     
Sbjct: 62  SLPIFFFEISKLAVEKKTKVQKDGLPAGVRQLIDLATAVPKKEDARQTVSRAGFFG---- 117

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
              H+G +++ F   +      +G              +F+   L +  Q    G   VP
Sbjct: 118 ---HVGSEVIDFTKSAGELITFIGAAFEAFVRMITGRARFRATDLGIFLQ--EAGAQAVP 172

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +V LISF+ G ++A  G  QLS FGA+++  DL+ I  +RE+G ++T +++AGR+G+A  
Sbjct: 173 IVSLISFLVGLILAFVGILQLSMFGAQVYVADLVGIAMVREMGAIMTGIIMAGRTGAAYA 232

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A++G+M++NEEIDA+ T+ +  +  L+ PR+ AL + +PLL + A+   I+G ++V    
Sbjct: 233 AQLGTMQVNEEIDALETLAIPPMEFLVLPRMVALAVMMPLLVLYADLMGILGGALVAVGM 292

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
           Y I   V+ SR  S  TL+++F GL         + +     G   G  ++++G   T+ 
Sbjct: 293 YKIDIIVYLSRTKSAVTLSDLFIGLFMGAVFGVLVALSGCLRGIQCGRSASAVGDATTSA 352

Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373
           VV  I  +II  ++  +    +GI
Sbjct: 353 VVTGIVAIIIATAVITVLCSILGI 376


>gi|261840140|gb|ACX99905.1| hypothetical protein HPKB_1368 [Helicobacter pylori 52]
          Length = 377

 Score =  159 bits (403), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 178/337 (52%), Gaps = 15/337 (4%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLIS--FTHRKKIKNQKPQ 99
           VD S   +ID +    +   +++    I+L  VS +      ++       + ++++K  
Sbjct: 51  VDFSGCQKIDFVFGMFLFDLVKERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAG 110

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
           + +     + +   +GK IV+  N   +  +  G+++     F  S +  K F ++ +  
Sbjct: 111 KKY-----ELMITKLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL-- 160

Query: 160 MYYVGVSG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +Y++  SG   +P+ IL  F+ G  +A QGA QL   GA + S+++ + L LREIG  + 
Sbjct: 161 LYHINESGFKVLPISILTVFIVGFAVALQGALQLQDLGAPLMSVEMTAKLALREIGPFIL 220

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
            +++AGRS S+  A+IG MKI EE+DA++TMG +    L+ PR+ AL+I LPLL  +A+ 
Sbjct: 221 TLVVAGRSASSFTAQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADA 280

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            AI+G    I    D+ F  +  R H T    +   G++KAPF   AI +V    GF V 
Sbjct: 281 FAILGGMFAIKYQLDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVK 340

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
             + S+G+  T  VV ++  +I +D++F+I +  + I
Sbjct: 341 GDTESIGRLTTISVVNALFWIIFLDAVFSIIFSKLNI 377


>gi|317014880|gb|ADU82316.1| hypothetical protein HPGAM_07715 [Helicobacter pylori Gambia94/24]
          Length = 377

 Score =  159 bits (403), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 92/264 (34%), Positives = 149/264 (56%), Gaps = 8/264 (3%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---VP 169
            +GK +V+  N   +  +  G+++     F  S +  K F ++ +  +Y++  SG   +P
Sbjct: 119 KLGKSLVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LYHINESGFKVLP 173

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V IL  F+ G  +A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  
Sbjct: 174 VSILTVFIVGFAVALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFT 233

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A+IG MKI EE+DA++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I   
Sbjct: 234 AQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQ 293

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            D+ F  +  R H T    +   G++KAPF   AI +V    GF V   + S+G+  T  
Sbjct: 294 LDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTIS 353

Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373
           VV ++  +I +D++F+I +  + I
Sbjct: 354 VVNALFWIIFLDAIFSILFSKLNI 377


>gi|188528238|ref|YP_001910925.1| hypothetical protein HPSH_07510 [Helicobacter pylori Shi470]
 gi|188144478|gb|ACD48895.1| hypothetical protein HPSH_07510 [Helicobacter pylori Shi470]
 gi|308064225|gb|ADO06112.1| putative ABC transport system permease protein [Helicobacter pylori
           Sat464]
          Length = 377

 Score =  159 bits (403), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 93/264 (35%), Positives = 149/264 (56%), Gaps = 8/264 (3%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---VP 169
            +GK IV+  N   +  +  G+++     F  S +  K F ++ +  +Y++  SG   +P
Sbjct: 119 KLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LYHINESGFKVLP 173

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V IL  F+ G  +A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  
Sbjct: 174 VSILTVFIVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFT 233

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A+IG MKI EE+DA++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I   
Sbjct: 234 AQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQ 293

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            D+ F  +  R H T    +   G++KAPF   AI +V    GF V   + S+G+  T  
Sbjct: 294 LDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTIS 353

Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373
           VV ++  +I +D++F+I +  + I
Sbjct: 354 VVNALFWIIFLDAVFSIIFSKLNI 377


>gi|317182671|dbj|BAJ60455.1| hypothetical protein HPF57_1381 [Helicobacter pylori F57]
          Length = 377

 Score =  159 bits (403), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 178/337 (52%), Gaps = 15/337 (4%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLIS--FTHRKKIKNQKPQ 99
           VD S   +ID +    +   +++    I+L  VS +      ++       + ++++K  
Sbjct: 51  VDFSGCQKIDFVFGMFLFDLVKERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAG 110

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
           + +     + +   +GK IV+  N   +  +  G+++     F  S +  K F ++ +  
Sbjct: 111 KKY-----ELMITKLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL-- 160

Query: 160 MYYVGVSG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +Y++  SG   +P+ IL  F+ G  +A QGA QL   GA + S+++ + L LREIG  + 
Sbjct: 161 LYHINESGFKVLPISILTVFIVGFAVALQGALQLQDLGAPLMSVEMTAKLALREIGPFIL 220

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
            +++AGRS S+  A+IG MKI EE+DA++TMG +    L+ PR+ AL+I LPLL  +A+ 
Sbjct: 221 TLVVAGRSASSFTAQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADA 280

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            AI+G    I    D+ F  +  R H T    +   G++KAPF   AI +V    GF V 
Sbjct: 281 FAILGGMFAIKYQLDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVK 340

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
             + S+G+  T  VV ++  +I +D++F+I +  + I
Sbjct: 341 GDTESIGRLTTISVVNALFWIIFLDAVFSIIFSKLNI 377


>gi|315453380|ref|YP_004073650.1| ABC transport system permease protein (pseudogene) [Helicobacter
           felis ATCC 49179]
 gi|315132432|emb|CBY83060.1| putative ABC transport system permease protein (pseudogene)
           [Helicobacter felis ATCC 49179]
          Length = 369

 Score =  159 bits (402), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 117/376 (31%), Positives = 188/376 (50%), Gaps = 38/376 (10%)

Query: 13  GNW--KSPEISEIADDVVMAINKSIQSDSAI--VDLSAITEIDTIGAELIMYFMEK---- 64
           GNW  K+P         ++ + K +++   I  VD   +  +D +   L+   + +    
Sbjct: 17  GNWDFKTPA------QTLLRLEKLLKNAPPIRAVDFREVERLDFVFLMLLYDLLGRKKPA 70

Query: 65  ------YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
                 Y+  + L+ V   +++  S++S  H K  K          N    L    G+ I
Sbjct: 71  ILNANAYNAHV-LEVVQHWVKEDPSILSREHSKPPK---------INPLNKL----GQSI 116

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLS-LIRQMYYVGVSGVPVVILISFV 177
           V F N   +  +  G+V+   G    +  K K   L+ LI  ++  G   +PV IL  FV
Sbjct: 117 VDFFNTMLNTFNFCGMVLYFLGR---AIIKPKTLCLTPLIHHIHESGFKVLPVSILTVFV 173

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G  IA QGA QL Q G  + SI++ + L LRE+G  +  +++AGRS S+  A+IG MKI
Sbjct: 174 VGFAIALQGAIQLQQLGFPLMSIEMTAKLALREMGPFILTLVVAGRSASSFTAQIGVMKI 233

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EE+DA+ TMGL     L+ PR+ AL+I +PL+  +A+  A++G  + I     + F  +
Sbjct: 234 TEELDAMHTMGLSPFAWLVLPRVLALVIVMPLMVFIADAFALLGTMVAIKYQLGVTFNHY 293

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            +R H    L++ F GLIKAPF   AI IV    GF V   + S+G   T  VV ++  +
Sbjct: 294 IARLHENVGLSHFFVGLIKAPFWGFAIAIVGCMRGFEVKGDTESIGTLTTISVVNALFWI 353

Query: 358 IIIDSLFAIFYFAIGI 373
           I +++LF++ +  + I
Sbjct: 354 IFLNALFSVIFSKLNI 369


>gi|315585855|gb|ADU40236.1| ABC superfamily ATP binding cassette transporter permease protein
           [Helicobacter pylori 35A]
          Length = 377

 Score =  159 bits (402), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 92/264 (34%), Positives = 149/264 (56%), Gaps = 8/264 (3%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---VP 169
            +GK IV+  N   +  +  G+++     F  S +  K F ++ +  +Y++  SG   +P
Sbjct: 119 KLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LYHINESGFKVLP 173

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           + IL  F+ G  +A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  
Sbjct: 174 ISILTVFIVGFAVALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFT 233

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A+IG MKI EE+DA++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I   
Sbjct: 234 AQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQ 293

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            D+ F  +  R H T    +   G++KAPF   AI +V    GF V   + S+G+  T  
Sbjct: 294 LDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTIS 353

Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373
           VV ++  +I +D++F+I +  + I
Sbjct: 354 VVNALFWIIFLDAVFSIIFSKLNI 377


>gi|54294946|ref|YP_127361.1| hypothetical protein lpl2025 [Legionella pneumophila str. Lens]
 gi|53754778|emb|CAH16265.1| hypothetical protein lpl2025 [Legionella pneumophila str. Lens]
          Length = 374

 Score =  159 bits (402), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 109/317 (34%), Positives = 176/317 (55%), Gaps = 18/317 (5%)

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
           ++K + +I+L   S   +Q+  LI  + ++ +  Q P  S      + + Y IGK     
Sbjct: 71  LKKRNNQIELVNFSDSQQQMLELIE-SKQEILSYQLPAVSK-----EGVLYQIGK----- 119

Query: 122 INDSCSQAH-ILGLVIS----NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
             +S ++ H + GL+I     +T  F A +Y  +  L S++  +   G+  +P++ L+SF
Sbjct: 120 --ESENKLHQVDGLIILIGDLSTRLFEAFAYWRRFHLPSIVSVIDSAGLKALPIIGLLSF 177

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
           + G V+A Q   QL  +GA IF   L  +   RE G L+TA+++AGR+ S+  A+IGSMK
Sbjct: 178 LIGVVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMK 237

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           INEE+DAI TMGL    +L+ P++  L+I  PLL   A+  +I GA I+     +I F  
Sbjct: 238 INEEVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFED 297

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           F SR   +  L  +  GL KAP  +  I +V   +GF V   ++S+G + T  VVQ++ +
Sbjct: 298 FLSRLRDSVGLNQMMLGLYKAPAFSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFL 357

Query: 357 VIIIDSLFAIFYFAIGI 373
           +II D+ F+I Y  +G+
Sbjct: 358 IIIADAAFSIAYSWMGL 374


>gi|190572714|ref|YP_001970559.1| putative ABC transporter permease [Stenotrophomonas maltophilia
           K279a]
 gi|190010636|emb|CAQ44245.1| putative permease component of ABC transporter protein
           [Stenotrophomonas maltophilia K279a]
          Length = 373

 Score =  159 bits (402), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 121/366 (33%), Positives = 201/366 (54%), Gaps = 21/366 (5%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66
           + R +G W + + +  A +V+  +  ++      +D + I ++D+ G   ++    +   
Sbjct: 21  LIRLSGTW-TLKTALAAAEVLRGVPDTLTG----IDATGIEKMDSAGVLQVLRVAHRADL 75

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF-FYNSFKNL--HYHIGKKIVKFIN 123
           G+  LQ    H     +L+           +P+R F    + + L    H     +K + 
Sbjct: 76  GEDALQFRPDH----QALVCTIEEVADDRPRPKRDFGVLAALERLGVSVHATGHNIKAL- 130

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
             CS    LG  +           +F+  L + + QM  VG+  VP+V L+S++ GAVIA
Sbjct: 131 --CS---FLGENLVKAARLVKEPRRFR--LTATVHQMEQVGLDAVPLVALLSYLVGAVIA 183

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
             G+  L  FGAEI+ ++L++I  LRE  VLLTA+++AGR+ SA  A+IG+MK  EEIDA
Sbjct: 184 FLGSTILRDFGAEIYVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKAREEIDA 243

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +RT+GLD + +L+ PR+ AL+++LPLLT +A  + + G   V     DIP  ++ +R H 
Sbjct: 244 MRTLGLDPIDLLVLPRLLALLVTLPLLTFIAMIAGLAGGITVGAFDLDIPPQMYIARMHE 303

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
           T  + ++  GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VIIID+ 
Sbjct: 304 TMEVRHMLVGLSKAPVFALVIGLIGCLEGLKVEGTAQSVGERTTSSVVQTISLVIIIDAF 363

Query: 364 FAIFYF 369
            A+++ 
Sbjct: 364 AALWFM 369


>gi|109948194|ref|YP_665422.1| putative ABC transport system permease protein [Helicobacter
           acinonychis str. Sheeba]
 gi|109715415|emb|CAK00423.1| putative ABC transport system permease protein [Helicobacter
           acinonychis str. Sheeba]
          Length = 377

 Score =  159 bits (401), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 93/264 (35%), Positives = 151/264 (57%), Gaps = 8/264 (3%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---VP 169
            +GK IV+  N   +  +  G+++     F    +  K F  + +  +Y++  SG   +P
Sbjct: 119 KMGKSIVETYNTFLNALNFCGMILFY---FIKGVFNPKRFCFTPL--VYHINESGFKVLP 173

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V IL  F+ G  I  QGA QL   G  + ++++ + L LREIG  +  +++AGRS S+  
Sbjct: 174 VSILTVFIVGFAITLQGALQLQDMGVPLTTVEMTAKLALREIGPFILTLVVAGRSASSFT 233

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A+IG MKI EE+DA++TMG +    L+ PR+ ALII LPL+  +A+  AI+G+   +   
Sbjct: 234 AQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALIIVLPLMVFIADAIAILGSMCAVKYQ 293

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            D+ F+ +  RFHST T  + + G+IKAPF   AI +V    GF V   + S+G+  T  
Sbjct: 294 LDLTFSSYVDRFHSTVTWNHFWVGIIKAPFWGFAIAVVGCMRGFEVRGDTESVGRLTTIS 353

Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373
           VV ++  +I +++ F+I +  +GI
Sbjct: 354 VVNALFWIIFLNATFSIVFSRLGI 377


>gi|307610778|emb|CBX00391.1| hypothetical protein LPW_21111 [Legionella pneumophila 130b]
          Length = 374

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/317 (34%), Positives = 175/317 (55%), Gaps = 18/317 (5%)

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
           ++K + +I+L   S   +Q+  LI  + +  +  Q P  S      + + Y IGK     
Sbjct: 71  LKKRNNQIELVNFSDSQQQMLELIE-SKQDILSYQLPAVSK-----EGVLYQIGK----- 119

Query: 122 INDSCSQAH-ILGLVIS----NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
             +S ++ H + GL+I     +T  F A +Y  +  L S++  +   G+  +P++ L+SF
Sbjct: 120 --ESENKLHQVDGLIILIGDLSTRLFEAFAYWRRFHLPSIVSVIDSAGLKALPIIGLLSF 177

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
           + G V+A Q   QL  +GA IF   L  +   RE G L+TA+++AGR+ S+  A+IGSMK
Sbjct: 178 LIGVVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMK 237

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           INEE+DAI TMGL    +L+ P++  L+I  PLL   A+  +I GA I+     +I F  
Sbjct: 238 INEEVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFED 297

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           F SR   +  L  +  GL KAP  +  I +V   +GF V   ++S+G + T  VVQ++ +
Sbjct: 298 FLSRLRDSVGLNQMMLGLYKAPAFSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFL 357

Query: 357 VIIIDSLFAIFYFAIGI 373
           +II D+ F+I Y  +G+
Sbjct: 358 IIIADAAFSIAYSWMGL 374


>gi|315498539|ref|YP_004087343.1| hypothetical protein Astex_1526 [Asticcacaulis excentricus CB 48]
 gi|315416551|gb|ADU13192.1| protein of unknown function DUF140 [Asticcacaulis excentricus CB
           48]
          Length = 377

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 182/365 (49%), Gaps = 14/365 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFMEKYH 66
           V    G+W +  + +  +     +  +++S SA+ V+   +   DT GA    Y +    
Sbjct: 18  VVSLTGDWTAIGLRDAGER----LKSALKSASAVRVETDDLKGFDTAGA----YALRTAL 69

Query: 67  GKIKLQGVSTHIEQL---FSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           G +    + +H  +L   + LI     + ++ QK       +        +G+      N
Sbjct: 70  GALGDDALFSHDPRLSAVYELIRDIQPQVVEAQKKTAQQKAHPIIAELAQLGRNTEDVFN 129

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
           D       +G +I        +  + +     L+ QM   G   + VV + +F  GAVIA
Sbjct: 130 DLRDLNVFIGQLIVTAFMSLVTPGRIR--WTPLVAQMQQAGFGALMVVCVTNFFVGAVIA 187

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
             G  QL QFGA +F+++L+ I  LRE G ++ AV+IAGRS S+  AEIG+MK+N+EI A
Sbjct: 188 FLGILQLQQFGAAVFAVELIGISVLREFGPVIAAVLIAGRSASSFTAEIGAMKMNQEISA 247

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R MG++    LI PR+ AL++++PL+T   + + ++G  +V+W         F  R   
Sbjct: 248 MRVMGINPFDALIFPRLAALVLTMPLITFAGSMAGLLGGFVVVWAQLGYGPHFFSIRMTE 307

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                N F G+IK P  A AI I+  + G  V     SLG++VT  VVQ+I  +I+ID++
Sbjct: 308 YVPFVNFFVGMIKVPLFAIAITIIGCRLGMNVTEDVISLGRQVTRAVVQAIFTIILIDAI 367

Query: 364 FAIFY 368
            A+ +
Sbjct: 368 VAMMF 372


>gi|15598407|ref|NP_251901.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|9949331|gb|AAG06599.1|AE004744_14 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
          Length = 381

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/204 (42%), Positives = 127/204 (62%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
            L+  +   G+  VP++ L++F+ GAVIA  GA  L+ FGA I++++L+    LRE  VL
Sbjct: 163 PLVANIEKSGLDAVPIIALLTFLVGAVIAFLGATVLANFGATIYTVNLVVFSFLREFAVL 222

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           LTA+++AGR+ SA  A+IGSMK NEEIDAIR +GL+ + +L+ PR+ AL++SLP+LT + 
Sbjct: 223 LTAILMAGRTASAFTAQIGSMKANEEIDAIRALGLNPIELLVLPRVLALLVSLPMLTFVG 282

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
               I+G   V     DIP A+F S       + +   G+ KAP  A  I ++   EGF 
Sbjct: 283 MLCGIVGGMTVCAWTLDIPPAMFLSIMEDGIGVQHFLVGISKAPLFAFLIAVIGCLEGFK 342

Query: 335 VGVHSNSLGKKVTTCVVQSISIVI 358
           V   + S+G+  TT VV SI +VI
Sbjct: 343 VSGSAQSVGEHTTTSVVHSIFVVI 366


>gi|52842264|ref|YP_096063.1| ABC transporter, permease [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52629375|gb|AAU28116.1| ABC transporter, permease [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 374

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/317 (34%), Positives = 175/317 (55%), Gaps = 18/317 (5%)

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
           ++K + +I+L   S   +Q+  LI  + +  +  Q P  S      + + Y IGK     
Sbjct: 71  LKKRNNQIELVNFSDSQQQMLELIE-SKQDILSYQLPAVSK-----EGVLYQIGK----- 119

Query: 122 INDSCSQAH-ILGLVIS----NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
             +S ++ H + GL+I     +T  F A +Y  +  L S++  +   G+  +P++ L+SF
Sbjct: 120 --ESENKLHQVDGLIILIGDLSTRLFEAFAYWRRFHLPSIVSVIDSAGLKALPIIGLLSF 177

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
           + G V+A Q   QL  +GA IF   L  +   RE G L+TA+++AGR+ S+  A+IGSMK
Sbjct: 178 LIGVVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMK 237

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           INEE+DAI TMGL    +L+ P++  L+I  PLL   A+  +I GA I+     +I F  
Sbjct: 238 INEEVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFED 297

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           F SR   +  L  +  GL KAP  +  I +V   +GF V   ++S+G + T  VVQ++ +
Sbjct: 298 FLSRLRDSVGLNQMMLGLYKAPAFSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFL 357

Query: 357 VIIIDSLFAIFYFAIGI 373
           +II D+ F+I Y  +G+
Sbjct: 358 IIIADAAFSIAYSWMGL 374


>gi|307720548|ref|YP_003891688.1| hypothetical protein Saut_0627 [Sulfurimonas autotrophica DSM
           16294]
 gi|306978641|gb|ADN08676.1| protein of unknown function DUF140 [Sulfurimonas autotrophica DSM
           16294]
          Length = 368

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 86/210 (40%), Positives = 129/210 (61%)

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
            V  + +V L SF+ G V A Q A+QL ++G  IF +D+M I   RE+  L+TA++IAGR
Sbjct: 159 AVRALGIVALTSFLIGLVTAYQAAYQLQRYGGNIFIVDMMGISVFRELAPLITAIVIAGR 218

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           SGSA  A+IG+MKI +EIDA+RTMG D    L+ PRI ALII LP+L  +++  A++G  
Sbjct: 219 SGSAYTAQIGAMKITQEIDAMRTMGFDPYTFLVLPRIIALIIMLPILIFVSDMMAMLGGI 278

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           IV     D+  ++F +R      + + + GL+K PF A  I  + +  G  V   + S+G
Sbjct: 279 IVADLSLDLIPSLFINRLSEVVAIKHFYVGLVKGPFFAFLIASIGIYRGLMVKDDTQSIG 338

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
              T  VV+S+  VI+ D++F+I +  +GI
Sbjct: 339 FNTTKSVVESLFAVIVCDAIFSIAFTNLGI 368


>gi|57505618|ref|ZP_00371545.1| conserved hypothetical integral membrane protein [Campylobacter
           upsaliensis RM3195]
 gi|57016165|gb|EAL52952.1| conserved hypothetical integral membrane protein [Campylobacter
           upsaliensis RM3195]
          Length = 377

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/379 (31%), Positives = 187/379 (49%), Gaps = 44/379 (11%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFMEKYHGKI 69
           G W     + IAD  +    K+ Q+   I+D   +  ID  G    +   Y ++K     
Sbjct: 25  GIWDK---NSIADFKITDFIKNFQT-QCILDFHHLEFIDMAGVRFFLALEYELQKRGITS 80

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
           +   +S   + LF L    +++ +K  K             H+   +    F+N      
Sbjct: 81  QRVHLSEKFDALFELCEKNYQRILKEPKK------------HFDTAEL---FVNLGVLSL 125

Query: 130 HILGLV---ISNTGEF------C---ASSYKFKGFLLSLIRQMYYV---GVSGVPVVILI 174
           ++LG++   I   GEF      C     +++F  FL       Y++    +  +P+VIL 
Sbjct: 126 NLLGILKQFICFVGEFFTAFFQCFKKPKTFRFVAFL-------YHIENSALKALPIVILT 178

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           + + G V+A Q AFQL+QFGA IF +DL+ I   RE+  L+ A++IAGRS S+  A+IG 
Sbjct: 179 ALLVGVVLAYQTAFQLAQFGANIFIVDLVGISATRELAPLIAAIVIAGRSASSYTAQIGV 238

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           MKI +EI A+ TMG      +I PR+ AL++++PL+  +++F +I G  +V     DI F
Sbjct: 239 MKITDEIAAMNTMGFSTFHFIIIPRVVALVVAMPLIVAVSDFVSIFGGMMVAHLNLDINF 298

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
             F  RF     L ++  GLIKAP     IG++A   G  V   + S+G   T  VV +I
Sbjct: 299 IEFLRRFKEAVDLKHVIIGLIKAPIFGFLIGLIACFRGLEVKHTTQSIGIYTTKSVVNAI 358

Query: 355 SIVIIIDSLFAIFYFAIGI 373
             VI  D+LF++    +GI
Sbjct: 359 FWVIAFDALFSVILTQMGI 377


>gi|254458263|ref|ZP_05071689.1| stas domain protein [Campylobacterales bacterium GD 1]
 gi|207085099|gb|EDZ62385.1| stas domain protein [Campylobacterales bacterium GD 1]
          Length = 357

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 86/210 (40%), Positives = 129/210 (61%)

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
            +  + ++ L SF+ G V+A Q A+QL  +GA IF +D++ I  LRE+  L+TA++IAGR
Sbjct: 148 AIKALGIISLTSFLIGLVVAYQSAYQLKIYGANIFIVDMLGISMLRELAPLMTAIVIAGR 207

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           SGSA  A+IG+MKI EE+DA+RTMG D    L+ PRI AL+I++P+L  +A+  ++ G  
Sbjct: 208 SGSAFTAQIGAMKITEELDAMRTMGFDPYIFLVLPRIIALMIAMPILIFVADIMSVFGGL 267

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           +V     DI   +F  RF+      + F G+ K PF A  I  + +  G  V   + S+G
Sbjct: 268 LVAVIDLDISPQLFIDRFNDVVAAKHFFIGIGKGPFFAFIIASIGVYRGLEVKDDTQSIG 327

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
              T  VV+SI  VII D++F+I +  +GI
Sbjct: 328 FNTTKSVVESIFAVIICDAIFSILFTNLGI 357


>gi|54297975|ref|YP_124344.1| hypothetical protein lpp2030 [Legionella pneumophila str. Paris]
 gi|53751760|emb|CAH13182.1| hypothetical protein lpp2030 [Legionella pneumophila str. Paris]
          Length = 374

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/317 (33%), Positives = 176/317 (55%), Gaps = 18/317 (5%)

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
           ++K + +++L   S   +Q+  LI  + ++ +  Q P  S      + + Y IGK     
Sbjct: 71  LKKRNNQVELVNFSDSQQQMLELIE-SKQEILSYQLPAVSK-----EGVLYQIGK----- 119

Query: 122 INDSCSQAH-ILGLVIS----NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
             +S ++ H + GL+I     +T  F A +Y  +  L S++  +   G+  +P++ L+SF
Sbjct: 120 --ESENKLHQVDGLIILIGDLSTRLFEAFAYWRRFHLPSIVSVIDSAGLKALPIIGLLSF 177

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
           + G V+A Q   QL  +GA IF   L  +   RE G L+TA+++AGR+ S+  A+IGSMK
Sbjct: 178 LIGVVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMK 237

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           INEE+DAI TMGL    +L+ P++  L+I  PLL   A+  +I GA I+     +I F  
Sbjct: 238 INEEVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFED 297

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           F +R   +  L  +  GL KAP  +  I +V   +GF V   ++S+G + T  VVQ++ +
Sbjct: 298 FLTRLRDSVGLNQMMLGLYKAPAFSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFL 357

Query: 357 VIIIDSLFAIFYFAIGI 373
           +II D+ F+I Y  +G+
Sbjct: 358 IIIADAAFSIAYSWMGL 374


>gi|317013234|gb|ADU83842.1| putative ABC transport system permease protein [Helicobacter pylori
           Lithuania75]
          Length = 377

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/271 (34%), Positives = 151/271 (55%), Gaps = 13/271 (4%)

Query: 111 HYHI-----GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
           HY +     GK IV+  +   +  +  G+++     F  S +  K F ++ +  +Y++  
Sbjct: 112 HYELLITKLGKSIVETYSTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LYHINE 166

Query: 166 SG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           SG   +PV IL  F+ G  +A QGA QL   GA + S+++ + L LREIG  +  +++AG
Sbjct: 167 SGFKVLPVSILTVFIVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAG 226

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           RS S+  A+IG MKI EE+DA++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G 
Sbjct: 227 RSASSFTAQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGG 286

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
              I    D+ F  +  R H T    +   G++KAPF   AI +V    GF V   + S+
Sbjct: 287 MFAIKYQLDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESI 346

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           G+  T  VV ++  +I +D++F+I +  + I
Sbjct: 347 GRLTTISVVNALFWIIFLDAVFSIVFSKLNI 377


>gi|152980330|ref|YP_001354931.1| ABC transport system permease protein [Janthinobacterium sp.
           Marseille]
 gi|151280407|gb|ABR88817.1| ABC transport system permease protein [Janthinobacterium sp.
           Marseille]
          Length = 374

 Score =  157 bits (396), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 182/363 (50%), Gaps = 13/363 (3%)

Query: 12  AGNWK-SPEISEIADDVVMAINKSIQS-DSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           AG+W+    I   A D + A  + ++  D    DLS I  +D IGA+L+     K     
Sbjct: 22  AGSWQVRALIDPGAMDKLTATLRGVRKVDETRWDLSGIEALDYIGAQLLWNAWGKKRPP- 80

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
           +L     H E  F  +  T   ++K     R + ++++      +   ++ FI       
Sbjct: 81  QLTLAPQH-ESFFQRLEQTGTLQVKRPPQHRWYTFSAYLQFKLRMADHMLGFIT------ 133

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
            ++G ++ + G F     +  G    +   +++ G   + +  L+ F+ G V++   A Q
Sbjct: 134 -LIGQLVMDMGRFIRQPQR--GPWKEISANIFHTGYQALGITALVGFLIGVVLSYLSAQQ 190

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L QFG +IF ++++ +  +RE+G LL A+++AGRSGS+I A++G M++ EE+DA+  MGL
Sbjct: 191 LHQFGGDIFLVNILGMSVIRELGPLLAAILVAGRSGSSITAQLGVMRVTEELDAMLVMGL 250

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
                LI P++ AL IS+PLL +  +  A+IG          + F  F         LAN
Sbjct: 251 PHGYRLIMPKVIALAISMPLLVVWTDAMALIGGMAAANVELGLSFKYFLRELPDAVPLAN 310

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
            + GL K       I +VA   G  +  ++ SLG+  T  VV +I++VI+ D++FAI + 
Sbjct: 311 YWIGLGKGVVFGSLIALVACHFGLRIKPNTESLGEGTTISVVTAITVVILADAVFAIVFS 370

Query: 370 AIG 372
            +G
Sbjct: 371 GVG 373


>gi|148359621|ref|YP_001250828.1| ABC transporter permease [Legionella pneumophila str. Corby]
 gi|296107663|ref|YP_003619364.1| putative ABC transport system permease protein [Legionella
           pneumophila 2300/99 Alcoy]
 gi|148281394|gb|ABQ55482.1| ABC transporter, permease [Legionella pneumophila str. Corby]
 gi|295649565|gb|ADG25412.1| putative ABC transport system permease protein [Legionella
           pneumophila 2300/99 Alcoy]
          Length = 374

 Score =  156 bits (395), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 107/317 (33%), Positives = 175/317 (55%), Gaps = 18/317 (5%)

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
           ++K + +++L   S   +Q+  LI  + +  +  Q P       S + + Y IGK     
Sbjct: 71  LKKRNNQVELVNFSDSQQQMLELIE-SKQDILSYQLP-----IVSKEGVLYQIGK----- 119

Query: 122 INDSCSQAH-ILGLVIS----NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
             +S ++ H + GL+I     +T  F A +Y  +  L S++  +   G+  +P++ L+SF
Sbjct: 120 --ESENKLHQVDGLIILIGDLSTRLFEAFAYWRRFHLPSIVSVIDSAGLKALPIIGLLSF 177

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
           + G V+A Q   QL  +GA IF   L  +   RE G L+TA+++AGR+ S+  A+IGSMK
Sbjct: 178 LIGVVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMK 237

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           INEE+DAI TMGL    +L+ P++  L+I  PLL   A+  +I GA I+     +I F  
Sbjct: 238 INEEVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFED 297

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           F +R   +  L  +  GL KAP  +  I +V   +GF V   ++S+G + T  VVQ++ +
Sbjct: 298 FLTRLRDSVGLNQMMLGLYKAPAFSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFL 357

Query: 357 VIIIDSLFAIFYFAIGI 373
           +II D+ F+I Y  +G+
Sbjct: 358 IIIADAAFSIAYSWMGL 374


>gi|223936767|ref|ZP_03628677.1| protein of unknown function DUF140 [bacterium Ellin514]
 gi|223894618|gb|EEF61069.1| protein of unknown function DUF140 [bacterium Ellin514]
          Length = 384

 Score =  155 bits (393), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 198/373 (53%), Gaps = 28/373 (7%)

Query: 12  AGNWKS----PEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME-KYH 66
           +G+WKS    P++  +++   + +++SI++ S   D+S +T   +    L+M   E    
Sbjct: 29  SGDWKSGEVFPDVGGVSNK--LDVDESIRALS--FDVSKVTSWSSGLIGLVMRCRELAME 84

Query: 67  GKIKLQ--GVSTHIEQLFSL-ISFTHRKKIKNQKPQRSFFYN---SFKNLHYHIGKKIVK 120
            KI     G+   +++L  L ++   +K  ++ + +   F         L    G++ +K
Sbjct: 85  RKIAFDQSGLPQSVQRLIVLALAVPEKKDARSLQTRPGIFEKIGLGVLGLRRS-GEETLK 143

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           FI D C+ A +                +++   + LI  M   G   +P+V LI+F+ GA
Sbjct: 144 FIGD-CTIAFL---------ALAKRKARYRWTEVWLI--MQQCGPDALPIVALINFLVGA 191

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           ++A  GA QLS+FGA I+  DL+ I  +RE+GV++ AV++ GR+G+A  A++G+MK+N+E
Sbjct: 192 ILAFVGAVQLSKFGAAIYVADLVGIATMREMGVIMMAVIMCGRTGAAFAAQLGTMKVNQE 251

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA +T+G+  +  L+ PRI  L +  P+L I A+  AI+G  +V     +  FA ++  
Sbjct: 252 IDAYKTLGISPIEFLVMPRIMCLWLMFPVLCIFADLMAIVGGGVVALAMLNFSFAEYWQE 311

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             +  TL + F G++K+      + + +   G   G  + ++G   T+ VV  I++++I 
Sbjct: 312 TVAAVTLTHFFIGIVKSFVFGVLVAMTSCLRGIQCGNDAAAVGLATTSAVVTGITVIVIA 371

Query: 361 DSLFAIFYFAIGI 373
           D++FA+     GI
Sbjct: 372 DAIFAVILNVFGI 384


>gi|134096148|ref|YP_001101223.1| putative transmembrane protein [Herminiimonas arsenicoxydans]
 gi|133740051|emb|CAL63102.1| Conserved hypothetical protein, putative ABC transporter
           [Herminiimonas arsenicoxydans]
          Length = 374

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 189/367 (51%), Gaps = 21/367 (5%)

Query: 12  AGNWKSPEISEIADDVVMAINKSIQS----DSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           AG+W+   ++  A + + AI   +Q+    ++   DLS IT +D IGA+L+        G
Sbjct: 22  AGSWQVRALA--APETMAAITAVLQTAGKAETVHWDLSQITALDYIGAQLLW----NAWG 75

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN--SFKNLHYHIGKKIVKFINDS 125
           K +   ++   +     +       ++ +KP + ++Y+  S   L ++I   ++ FI+  
Sbjct: 76  KKRPAQLTLAPQHADFFLRLEQTGPLEWKKPPQKYWYSLTSLLQLKHNILDHLLGFIS-- 133

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                ++G +  + G F     +  G    +   +++ G   + +  L+ F+ G V++  
Sbjct: 134 -----LIGQLTMDIGRFAREPQR--GPWKEISANIFHAGYQALGITALVGFLIGVVLSYL 186

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            A QL QFG ++F ++++ +  +RE+G LL A+++AGRSGS+I A++G M++ EE+DA+ 
Sbjct: 187 SAQQLHQFGGDVFLVNILGMSVIRELGPLLAAILVAGRSGSSITAQLGVMRVTEELDAML 246

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MGL     L+ P++ AL I++PLL +  +  A+IG          + +  F        
Sbjct: 247 VMGLPHGYRLVMPKVIALAIAMPLLVVWTDAMALIGGMAAANLELGLSYKYFIRELPDAV 306

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            LAN + GL K       I +VA   G  +  ++ SLG   T  VV +I+IVI+ D+LFA
Sbjct: 307 PLANYWIGLGKGVVFGALIALVACHFGLRIKPNTESLGAGTTISVVSAITIVILADALFA 366

Query: 366 IFYFAIG 372
           I +  +G
Sbjct: 367 IIFSKVG 373


>gi|237751540|ref|ZP_04582020.1| ABC transport system permease [Helicobacter bilis ATCC 43879]
 gi|229372906|gb|EEO23297.1| ABC transport system permease [Helicobacter bilis ATCC 43879]
          Length = 387

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 148/273 (54%), Gaps = 6/273 (2%)

Query: 98  PQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVIS--NTGEFCASSYKFKGFLLS 155
           P R    N F +    IG+  V F   + S  + +G+ +     G    S+++FK    S
Sbjct: 114 PYRPKRLNIFSSFFSFIGQWCVSFYQTALSFFNFMGMFLHFFMLGCLKPSNFRFK----S 169

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI  +Y  G   +PV ++ S + G  I  QGA+QL+  G  I S+D  + L LRE+G  +
Sbjct: 170 LIYHIYEQGFKALPVGLMTSLIIGYAITLQGAYQLNSMGVPIMSVDTTAKLALREMGPFI 229

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++IAGRS S+  A++GSM++ EE+ A++ M L+    LI PRI ALII +PL+   A+
Sbjct: 230 LALVIAGRSASSFTAQLGSMRLTEELSAMKAMNLNIFYFLIIPRILALIIVMPLMVFAAD 289

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             A+ G  + I    +I F  +  RF+ T ++ + + G++KAP     IGIV    G   
Sbjct: 290 AIALFGGMVAIKTSINIGFETYLERFYETVSITHFWIGVVKAPVFGAIIGIVGCFRGLEC 349

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
              + S+GK  T  VV +I  +I+ +++F+  +
Sbjct: 350 RGDTQSIGKMTTMSVVNAIFWIIMANAIFSFIF 382


>gi|208779915|ref|ZP_03247259.1| conserved hypothetical protein [Francisella novicida FTG]
 gi|254374661|ref|ZP_04990142.1| hypothetical protein FTDG_00836 [Francisella novicida GA99-3548]
 gi|151572380|gb|EDN38034.1| hypothetical protein FTDG_00836 [Francisella novicida GA99-3548]
 gi|208744370|gb|EDZ90670.1| conserved hypothetical protein [Francisella novicida FTG]
          Length = 366

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/335 (33%), Positives = 177/335 (52%), Gaps = 24/335 (7%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKK-----IKNQ 96
           +D++ I  +DT GA    YF+ K    ++L    T  + +F      H+ K     + N 
Sbjct: 40  IDITKIQALDTAGA----YFILKVLKDLEL----TKEDLVFD----NHKDKNLIELVANN 87

Query: 97  KPQRSFFYNSFK-NLH----YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKG 151
            P R    NS K N+     Y +GK     + +  +    LG ++   G        ++ 
Sbjct: 88  FPTRVDKENSHKSNIVFTSIYTLGKNTNNLLQEVKASIGFLGAIL--LGYLTLIRKPYRS 145

Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211
           F   ++   Y   +  + +V+L+S + G V+       + Q+G +IF +D++ I   RE 
Sbjct: 146 FFSIVLNIAYDSTIKALSIVMLLSLIIGLVLTYLPLNLMMQYGTQIFVVDMLGISSFREF 205

Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271
             L TA++IAGRSGSA  +EIG MK+NEEIDA++T+G D ++ L+ PRI ALIISLP+LT
Sbjct: 206 APLFTAIIIAGRSGSAFTSEIGIMKVNEEIDALQTIGEDPIQRLVLPRITALIISLPVLT 265

Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
           ++A  + IIG  I+      I    F  R  S   + + + GL+K PF A  I  +   +
Sbjct: 266 VIAMIANIIGGIIIADVIAGITPLQFIERLFSNVNVNHFYIGLLKTPFFALVIAGIGCHQ 325

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           G AV   S S+GK  TT VV SI ++I++D++FA+
Sbjct: 326 GLAVRRDSQSVGKATTTSVVYSIFLIIVVDAIFAV 360


>gi|332184385|gb|AEE26639.1| ABC-type transport system permease protein [Francisella cf.
           novicida 3523]
          Length = 366

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/327 (33%), Positives = 173/327 (52%), Gaps = 8/327 (2%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYH-GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100
           +D++ I  +DT GA  I+  ++     K  L   S   + L  L++     KI  +   +
Sbjct: 40  IDITKIQSLDTAGAYFILRVLKDLGLTKKDLILNSDKDKNLIELVANNFPTKIDKEYSHK 99

Query: 101 S-FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
           S   + S     Y +GK     + +  +    LG ++   G        +K F   ++  
Sbjct: 100 SNIVFTSI----YTLGKNTNNLLQEIKASIGFLGAIL--LGYLTLIRKPYKSFFSIVLNI 153

Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219
            Y   +  + +V+L+S + G V+       + Q+G +IF +D++ I   RE   L TA++
Sbjct: 154 AYDSTIKALSIVMLLSLIIGLVLTYLPLNLMMQYGTQIFVVDMLGISSFREFAPLFTAII 213

Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279
           IAGRSGSA  +EIG MK+NEEIDA++T+G D ++ L+ PRI ALIISLP+LT++A  + I
Sbjct: 214 IAGRSGSAFTSEIGIMKVNEEIDALQTIGEDPIQRLVLPRITALIISLPVLTVIAMIANI 273

Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339
           IG  I+      I    F  R  S   + + + GL+K PF A  I  +   +G AV   S
Sbjct: 274 IGGIIIADIIAGITPLQFIERLFSNVNVNHFYIGLLKTPFFALVIAGIGCHQGLAVRRDS 333

Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAI 366
            S+GK  TT VV SI ++I++D++FA+
Sbjct: 334 QSVGKATTTSVVYSIFLIIVVDAIFAV 360


>gi|118497851|ref|YP_898901.1| ABC transporter membrane protein [Francisella tularensis subsp.
           novicida U112]
 gi|194323824|ref|ZP_03057600.1| conserved hypothetical protein [Francisella tularensis subsp.
           novicida FTE]
 gi|254373206|ref|ZP_04988695.1| ABC superfamily ATP binding cassette transporter [Francisella
           tularensis subsp. novicida GA99-3549]
 gi|118423757|gb|ABK90147.1| ABC-type transport system permease protein [Francisella novicida
           U112]
 gi|151570933|gb|EDN36587.1| ABC superfamily ATP binding cassette transporter [Francisella
           novicida GA99-3549]
 gi|194322188|gb|EDX19670.1| conserved hypothetical protein [Francisella tularensis subsp.
           novicida FTE]
          Length = 366

 Score =  153 bits (387), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/327 (32%), Positives = 173/327 (52%), Gaps = 8/327 (2%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQ-LFSLISFTHRKKIKNQKPQR 100
           +D++ I  +DT GA  I+  ++      +      H ++ L  L++     K+  +   +
Sbjct: 40  IDITKIQALDTAGAYFILKVLKDLELTKEDLVFDNHKDKNLIELVANNFPTKVDKENSHK 99

Query: 101 S-FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
           S   + S     Y +GK     + +  +    LG ++   G        ++ F   ++  
Sbjct: 100 SNIVFTSI----YTLGKNTNNLLQEVKASIGFLGAIL--LGYLTLIRKPYRSFFSIVLNI 153

Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219
            Y   +  + +V+L+S + G V+       + Q+G +IF +D++ I   RE   L TA++
Sbjct: 154 AYDSTIKALSIVMLLSLIIGLVLTYLPLNLMMQYGTQIFVVDMLGISSFREFAPLFTAII 213

Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279
           IAGRSGSA  +EIG MK+NEEIDA++T+G D ++ L+ PRI ALIISLP+LT++A  + I
Sbjct: 214 IAGRSGSAFTSEIGIMKVNEEIDALQTIGEDPIQRLVLPRITALIISLPVLTVIAMIANI 273

Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339
           IG  I+      I    F  R  S   + + + GL+K PF A  I  +   +G AV   S
Sbjct: 274 IGGIIIADVIAGITPLQFIERLFSNVNVNHFYIGLLKTPFFALVIAGIGCHQGLAVRRDS 333

Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAI 366
            S+GK  TT VV SI ++I++D++FA+
Sbjct: 334 QSVGKATTTSVVYSIFLIIVVDAIFAV 360


>gi|241668212|ref|ZP_04755790.1| ABC-type transport system permease protein [Francisella
           philomiragia subsp. philomiragia ATCC 25015]
 gi|254876747|ref|ZP_05249457.1| ABC transporter, permease protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842768|gb|EET21182.1| ABC transporter, permease protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 365

 Score =  153 bits (387), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 175/333 (52%), Gaps = 8/333 (2%)

Query: 36  QSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKL--QGVSTHIEQLFSLISFTHRKKI 93
           + D   +DL+ +T +DT GA    Y + K    ++L  + +    E+  +L+    +   
Sbjct: 34  KDDIKQIDLTKVTLLDTAGA----YIIIKTAKNLRLSKENIIFANEKDKNLVDIVFKNFP 89

Query: 94  KNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFL 153
              + + S   N   N  Y +GK     +++  +    LG +    G        +K F 
Sbjct: 90  STAEEELSNKSNVVFNSIYTLGKNTNNLLSEVKTSISFLGAIF--LGYITLIRRPYKAFF 147

Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
             ++   Y   +  + +VIL+S + G V+       L Q+G +IF +D++ I   RE   
Sbjct: 148 SIVLNICYDSTIRALSIVILLSLIIGLVLTYLPLNLLMQYGTQIFVVDMLGISSFREFAP 207

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           L TA++IAGRSGSA  +EIG MK+NEEIDA++T+G D ++ L+ PRI AL+ISLP+LT++
Sbjct: 208 LFTAIIIAGRSGSAFTSEIGIMKVNEEIDALQTIGEDPMQRLVLPRITALVISLPVLTVI 267

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
           A  + I G  I+      I    F  R  S   + + + GL+K PF A  I  +   +G 
Sbjct: 268 AMIANIAGGIIIADLIAGITPLQFIERLFSNVNVNHFYIGLLKTPFFALVIAGIGCHQGL 327

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           +V   S S+GK  TT VV SI ++I++D++FA+
Sbjct: 328 SVKRDSQSVGKATTTSVVYSIFLIILVDAIFAV 360


>gi|56479165|ref|YP_160754.1| ABC transporter permease [Aromatoleum aromaticum EbN1]
 gi|56315208|emb|CAI09853.1| Possible ABC transport permease [Aromatoleum aromaticum EbN1]
          Length = 374

 Score =  153 bits (387), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 188/370 (50%), Gaps = 24/370 (6%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-FMEKYHGK 68
           R  G+W    ++  AD+    + ++    +A   L  +T +D+ GA L+ + + E++   
Sbjct: 21  RLEGDWTLRALAPRADEFRRLLARA--GPAASWKLDGVTRLDSFGATLLWHAWREQWP-- 76

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
              Q +S   ++L ++I        +     R+F   +  +    +G  ++ F N     
Sbjct: 77  ---QDLSAD-DELRAVIGRIEATAAEPLPEARAF---TLTDAIVVLGAGLLGFANH---- 125

Query: 129 AHILGLVISNTGEFCAS-SYKFKGFLLSLIRQ----MYYVGVSGVPVVILISFVTGAVIA 183
              L   +   G+ C   +Y  +      +R+    +Y VG    PV  L+ F+ G V++
Sbjct: 126 ---LAAFVQLAGQLCLDIAYLLRHPRDWPLREISANLYKVGARATPVAALVGFLIGVVLS 182

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
              A QL  FGA+I+ ++++ +  +RE+G +L +V++AGRSGSA+ A++G M++ +E+DA
Sbjct: 183 YLSALQLQAFGADIYIVNILGLGIVRELGPVLVSVLVAGRSGSAMTAQLGVMRVTDELDA 242

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG+     L+ P++ AL +++PLL +  +  A+ G  +  W   D+ F  F      
Sbjct: 243 LSAMGISRTVRLVLPKVVALTVAMPLLVLWTSAVALFGGMVSAWVQLDLGFGFFLDTLPR 302

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              +AN++ GL K      +I +VA   G  V  ++ SL    T  VV +I++VI+ID++
Sbjct: 303 VVPVANLYIGLAKGAVFGLSIALVACHFGLRVRPNTESLSANTTASVVSAITVVILIDAV 362

Query: 364 FAIFYFAIGI 373
           FAI   +IG+
Sbjct: 363 FAIATRSIGV 372


>gi|270159818|ref|ZP_06188474.1| putative ABC transporter permease [Legionella longbeachae D-4968]
 gi|289165424|ref|YP_003455562.1| ABC transporter permease protein [Legionella longbeachae NSW150]
 gi|269988157|gb|EEZ94412.1| putative ABC transporter permease [Legionella longbeachae D-4968]
 gi|288858597|emb|CBJ12478.1| putative ABC transporter permease protein [Legionella longbeachae
           NSW150]
          Length = 375

 Score =  153 bits (386), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 167/311 (53%), Gaps = 15/311 (4%)

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF--KNLHYHIGKKIV 119
           +E+   +++L   +   +QL  LI        K++K    +   S   +NL Y +GK+  
Sbjct: 71  LEQRENQVELTDFTETQQQLLELI--------KSKKDILDYHIPSAPKENLFYQLGKESE 122

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                      ++G + +   E   +  +F+  L S+I  +Y  GV+ +P++ L+SF+ G
Sbjct: 123 NKFRQVDGLLVLVGDLTTKIIEAFGNWRRFQ--LPSIISNIYTTGVTALPILALLSFLIG 180

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A Q   QL  +GA  F   L  +   RE   L+TA+++AGR+ SA  A+IGSMK+NE
Sbjct: 181 VVLAYQMGLQLQTYGANSFIAYLSGMAIFREFAPLITAIIVAGRTSSAFTAQIGSMKLNE 240

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DA+ TMGL    +L+ P++  L+I+ PLL   ++  +I+G+ I+      I F  F  
Sbjct: 241 EVDALLTMGLSPTELLVLPKVIGLLIAFPLLIFWSDLFSILGSMIMSNNMLGINFTDFLQ 300

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV--GVHSNSLGKKVTTCVVQSISIV 357
           R   T  L+ +  GL KAP  A  I +V   +GF V  G   N +G + T  VVQ++ ++
Sbjct: 301 RLRDTVGLSQLNLGLYKAPAFALLIALVGCFQGFKVEAGTEKN-IGSQTTKSVVQALFLI 359

Query: 358 IIIDSLFAIFY 368
           II D+++++ Y
Sbjct: 360 IIADAIYSVIY 370


>gi|260219765|emb|CBA26623.1| hypothetical protein Csp_H39530 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 387

 Score =  153 bits (386), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 185/367 (50%), Gaps = 19/367 (5%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQ------SDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
           G W +  +S  A  V   + K++Q      + +   DL     ID  GA+ +++      
Sbjct: 34  GRWTADALS--AKHVWQPLEKALQGVPGNGAPAVAWDLREAQRIDHTGAQ-VLWNAWGRQ 90

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
              KLQ        L  +  FT         P        +  L   +G+K+ +  +   
Sbjct: 91  WPAKLQAEPLQKALLDRVAKFT--------VPTPPVERLDWHALLVSLGRKLARVESHLG 142

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
               ++G ++ +  +     +  +G    +   +Y +G + +P+  L+ F+ G V+A   
Sbjct: 143 GMVRLIGQLMLDVLQLL--RHPLQGPWRDVSGHLYRIGATALPITALVGFLIGVVLAYLM 200

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           + QL Q+GA+ F ++++ +  +RE+G +L A+++AGRSGSAI A+IG M++ EE+DA+R 
Sbjct: 201 SKQLRQYGADSFIVNILGMSLIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELDAMRV 260

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG+     L+ PR  A+ I++PL+ +    +A++G  +       +  A FF+    T  
Sbjct: 261 MGIPKGFRLVMPRTLAMAIAMPLVAVWTTMAALLGGMLASDLSMGLTPAYFFTALPKTVE 320

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           ++N++  L+K+      I ++A   G  V   + SLG+  T  VV SI++VI++D+LFA+
Sbjct: 321 ISNLWLSLVKSCVFGVLISLLACHHGLRVKPDTQSLGEGTTASVVSSITMVILVDALFAV 380

Query: 367 FYFAIGI 373
            + ++G+
Sbjct: 381 IFKSVGL 387


>gi|254284160|ref|ZP_04959128.1| ABC transporter permease protein [gamma proteobacterium NOR51-B]
 gi|219680363|gb|EED36712.1| ABC transporter permease protein [gamma proteobacterium NOR51-B]
          Length = 377

 Score =  152 bits (384), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 190/375 (50%), Gaps = 39/375 (10%)

Query: 13  GNWKS----PEISEI--ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
           G+W+S    PE+  +   DD V A+          VD   +   D+     ++  + K H
Sbjct: 28  GSWESSAVLPELGALFQPDDTVTALR---------VDALEVARWDS----RLISLLLKLH 74

Query: 67  GKIKLQGVSTHIE------QLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHY--HIGKKI 118
              + +G+S   E      QL +L +      +++   Q + + +S   L Y   +G ++
Sbjct: 75  RYCESRGISITTELPEGASQLLAL-AVAVPPAVESPS-QSAGWLHSLNPLPYLERLGARV 132

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
             F+N        +G ++S+TG       + +  +  L+   Y  G + +P++ L S + 
Sbjct: 133 TDFLN-------FVGSLVSSTGRVVTGRGRVR--VSDLLAFAYQTGPNALPIIGLTSLLV 183

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G ++   GA QL QFGA IF  DL++I  LRE+G L+TA++IAGR+G+A  A++G+M++N
Sbjct: 184 GMILGYLGAVQLQQFGAGIFVADLVTIGVLREMGALMTAIIIAGRTGAAYAAQLGTMRVN 243

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE+DAI  +G+  +  L+ PR+ A+ + +PLL++ A    I+G  IV       P   ++
Sbjct: 244 EEVDAIEILGISLMDFLVLPRVLAVTLMVPLLSLYAAIMGIVGGGIVSISLGITPLQ-YW 302

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           ++  ++  L ++  GL KA      IGI   + G   G  S  +GK  TT VV ++  +I
Sbjct: 303 TQAQTSLGLDHLLVGLSKALLFGALIGIAGCRAGMQSGRSSEGVGKATTTAVVVALVYLI 362

Query: 359 IIDSLFAIFYFAIGI 373
           + D+   +    +GI
Sbjct: 363 LADAAVNLLCQLLGI 377


>gi|237752254|ref|ZP_04582734.1| toluene ABC transporter permease [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229376496|gb|EEO26587.1| toluene ABC transporter permease [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 373

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 82/218 (37%), Positives = 129/218 (59%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           +L  Q+    +  VP++ L  F+ G VIA QG+ QL QFGA +  +++ ++L LRE+  +
Sbjct: 155 ALFFQIQEAVIKAVPIISLACFLIGIVIAYQGSLQLRQFGASVLIVEMSAMLTLREMAPI 214

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           + A+++AGRS SA  AEIG M+  +EIDA+R MG + V  LI PRI+AL+ +LPL+  +A
Sbjct: 215 IVAIIVAGRSASAFSAEIGMMRATQEIDAMRVMGFNPVTFLIFPRIFALLFALPLVVFVA 274

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
           +   ++G  ++      I    F  RF  T  + + + G++KAPF    IG++    GFA
Sbjct: 275 DMFGLLGGMLISQLQLGISSEHFIERFLQTVEMRHFWIGMLKAPFFGLIIGLIGCYHGFA 334

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
               + S+G   T  VV+SI  VI  D+L ++ +  IG
Sbjct: 335 TQKDTRSIGVHTTKSVVESIFCVIAFDALCSVLFTQIG 372


>gi|239813318|ref|YP_002942228.1| hypothetical protein Vapar_0299 [Variovorax paradoxus S110]
 gi|239799895|gb|ACS16962.1| protein of unknown function DUF140 [Variovorax paradoxus S110]
          Length = 388

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 192/385 (49%), Gaps = 39/385 (10%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSI----QSDSAIVDLSAITEIDTIGAELI 58
           ++G +    +G W +  +S  +     A++K +     +D    DL  I ++D IGA+L+
Sbjct: 25  QDGRSWTVASGRWTTLAMS--SRSAWQALSKDLAGAPPADGRAWDLRPIEQLDHIGAQLL 82

Query: 59  M-YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ------RSFFYNSFKNLH 111
             ++  ++   ++L     H   L  +  FT       + P       R F +   + L 
Sbjct: 83  WDHWRHRWPATLELS--PQHKAVLDQVAQFT--VGTPEEPPPTLAERLRHFSHTGARGLE 138

Query: 112 YHIGKKIVKFIN----DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167
             + +  V  I     D+C+      L   + G +      F G L       Y  G + 
Sbjct: 139 --VARDFVGLIGQLALDACTL-----LRAPHRGPW----RDFSGHL-------YQFGATA 180

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           + +  L+  + G V+A   + QL Q+GAE F ++++ +  +RE+G +L AV+IAGRSGSA
Sbjct: 181 LHITALVGLLIGVVLAYLISQQLRQYGAEAFVVNILGLSLIRELGPVLAAVLIAGRSGSA 240

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A+IG M++ EE+DA+R MG+     L+ PR+ AL I++PL+++  + +A++G  +   
Sbjct: 241 ITAQIGVMRVTEELDAMRVMGIPHGFRLVMPRVMALAIAMPLISLWTSMAALLGGMLAAD 300

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
              DI  A F S       ++N++  L K+      I ++    G  V  ++ SLG+  T
Sbjct: 301 AALDISPAYFLSALPRAVPISNLWLALAKSAVFGILIALIGCYFGMKVKPNTESLGRGTT 360

Query: 348 TCVVQSISIVIIIDSLFAIFYFAIG 372
           + VV SI+ VI++D+LFA+ +  +G
Sbjct: 361 SSVVTSITAVILVDALFAVLFKGVG 385


>gi|264676422|ref|YP_003276328.1| inner membrane ABC-transporter component [Comamonas testosteroni
           CNB-2]
 gi|299533747|ref|ZP_07047119.1| putative ABC transporter, permease protein [Comamonas testosteroni
           S44]
 gi|262206934|gb|ACY31032.1| putative inner membrane ABC-transporter component [Comamonas
           testosteroni CNB-2]
 gi|298718296|gb|EFI59281.1| putative ABC transporter, permease protein [Comamonas testosteroni
           S44]
          Length = 375

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 183/364 (50%), Gaps = 16/364 (4%)

Query: 12  AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKL 71
           AG W + E+ +      +A         A  DL  +   D IGA+L+    E++      
Sbjct: 24  AGRWSAAELGDRHIWRRLAPQIRAVPKGAAWDLQQMVWFDHIGAQLLW---EQWGKAWPA 80

Query: 72  QGVSTHIEQLFSLISFTHR-KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ-A 129
           Q ++T  ++  S++    R  ++   KP+ S +      L    G+ ++    D+C   +
Sbjct: 81  QLLTTKTQR--SMLERVARFSEVPESKPEPSGWMCEVNRL----GQMVI----DACGHFS 130

Query: 130 HILGLVISNTGEFCASSY-KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
           +++ LV     +         +G    +   +Y  G + +P+  L+ F+ G V+A   A 
Sbjct: 131 NLIQLVGQLLLDCLRLLRNPLRGPWRDISGHLYATGATALPITALVGFLIGVVLAYLMAL 190

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           QL QFGAE F ++++ I  +RE+G LL A+++AGRSGSAI A+IG M++ EE+DA++ MG
Sbjct: 191 QLRQFGAESFIVNILGISLIRELGPLLAAILVAGRSGSAITAQIGVMRVTEELDAMQVMG 250

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +     L+ PR  AL +S+PL+ +    +A+ G  +      DI  + F     +   + 
Sbjct: 251 ISQGYRLVLPRALALAVSMPLVALWTILAALAGGMVAADLTMDITPSYFVQSLPAAVKVG 310

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           N+   + K+      I ++    G  V  ++ SLG+  T  VV SI++VII+D++FAI +
Sbjct: 311 NLVLAMGKSVVFGVLIALIGCHWGLKVEPNTQSLGRGTTAAVVSSITMVIIVDAIFAILF 370

Query: 369 FAIG 372
             +G
Sbjct: 371 RNVG 374


>gi|56708309|ref|YP_170205.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110670780|ref|YP_667337.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis FSC198]
 gi|134301737|ref|YP_001121705.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|187931809|ref|YP_001891794.1| ABC-type transport system permease protein [Francisella tularensis
           subsp. mediasiatica FSC147]
 gi|224457429|ref|ZP_03665902.1| ABC-type transport system permease protein [Francisella tularensis
           subsp. tularensis MA00-2987]
 gi|254370792|ref|ZP_04986797.1| ABC superfamily ATP binding cassette transporter [Francisella
           tularensis subsp. tularensis FSC033]
 gi|254875129|ref|ZP_05247839.1| ABC transporter [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|56604801|emb|CAG45880.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110321113|emb|CAL09263.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis FSC198]
 gi|134049514|gb|ABO46585.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|151569035|gb|EDN34689.1| ABC superfamily ATP binding cassette transporter [Francisella
           tularensis subsp. tularensis FSC033]
 gi|187712718|gb|ACD31015.1| ABC-type transport system permease protein [Francisella tularensis
           subsp. mediasiatica FSC147]
 gi|254841128|gb|EET19564.1| ABC transporter [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282159540|gb|ADA78931.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 366

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 24/335 (7%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKK-----IKNQ 96
           +D++ I  +DT GA    YF+ K    ++L    T  + +F      H+ K     + N 
Sbjct: 40  IDITKIQALDTAGA----YFILKVLKDLEL----TKEDLVFD----NHKDKNLIELVANN 87

Query: 97  KPQRSFFYNSFK-NLH----YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKG 151
            P R    NS K N+     Y +GK     + +  +    LG ++   G        ++ 
Sbjct: 88  FPTRVDKENSHKSNIVFTSIYTLGKNTNNLLQEIKASIGFLGAIL--LGYLTLIRKPYRS 145

Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211
           F   ++   Y   +  + +V+L+S + G V+       + Q+G +IF +D++ I   RE 
Sbjct: 146 FFSIVLNIAYDSTIKALSIVMLLSLIIGLVLTYLPLNLMMQYGTQIFVVDMLGISSFREF 205

Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271
             L TA++IAGRS SA  +EIG MK+NEEIDA++T+G D ++ L+ PRI ALIISLP+LT
Sbjct: 206 APLFTAIIIAGRSSSAFTSEIGIMKVNEEIDALQTIGEDPIQRLVLPRITALIISLPVLT 265

Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
           ++A  + II   I+      I    F  R  S   + + + GL+K PF A  I  +   +
Sbjct: 266 VIAMIANIISGIIIADVIAGITPLQFIERLFSNVNVNHFYIGLLKTPFFALVIAGIGCHQ 325

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           G AV   S S+GK  TT VV SI ++I++D++FA+
Sbjct: 326 GLAVRRDSQSVGKATTTSVVYSIFLIIVVDAIFAV 360


>gi|78067712|ref|YP_370481.1| ABC transporter, inner membrane subunit [Burkholderia sp. 383]
 gi|77968457|gb|ABB09837.1| ABC transporter, inner membrane subunit [Burkholderia sp. 383]
          Length = 374

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 182/376 (48%), Gaps = 35/376 (9%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           R  G W +  ++     V   +        +  DLS I  +D +G + +     +  G+ 
Sbjct: 21  RLYGQWTALALARNRGAVARRVASIASGRVSEWDLSGIERLDHVGGQALW----RVWGRK 76

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
              GV+  + Q  ++     R   + + P+R   ++    L    G+ I  F        
Sbjct: 77  LPPGVALSVTQ-RTIFERIERLDSEREAPERVVRFDPVTRL----GQAIFGFGEHLQGGI 131

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQ------------MYYVGVSGVPVVILISFV 177
            + GLVI +               LS++R+            +Y  G   +P+  L++F+
Sbjct: 132 AMFGLVILDA--------------LSVLRRPKTMPWKETSANIYSAGAQALPITALVAFL 177

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V++   A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++
Sbjct: 178 IGIVLSYLSAQQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRV 237

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EE+DA+R MG+     LI PR+ AL I++PLL +  N  A+ G ++       I    F
Sbjct: 238 TEELDAMRVMGIPHGLRLILPRVLALGIAMPLLVMWTNIVALTGGALAAKLVLGIDVNYF 297

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                    +AN++ G+ K       I +VA   GF +  +S SLG+  TT VV SI++V
Sbjct: 298 VRSLPGVVPIANLYIGVGKGIVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVV 357

Query: 358 IIIDSLFAIFYFAIGI 373
           I+ D++FAI +  +G+
Sbjct: 358 ILADAVFAILFQNVGL 373


>gi|242278699|ref|YP_002990828.1| hypothetical protein Desal_1226 [Desulfovibrio salexigens DSM 2638]
 gi|242121593|gb|ACS79289.1| protein of unknown function DUF140 [Desulfovibrio salexigens DSM
           2638]
          Length = 371

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 175/358 (48%), Gaps = 14/358 (3%)

Query: 21  SEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK---IKLQGVSTH 77
           +E A +V      ++ +   +V+ S I  +D  GA L M        +   + + G+   
Sbjct: 23  AEGAGEVWDKARAAVAAGCLVVECSGIEYLDGGGASLFMMMKAGCRDRGSSLVINGLRPE 82

Query: 78  IEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILG--LV 135
                 L           Q  ++       +     +G+       D   Q    G  ++
Sbjct: 83  FASFLELFDLDKAAPPSGQVKRK----GGIRGWITSVGQSGQAVAADMREQIEFTGNCVL 138

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
            S +     +  ++  F L+  +    VG  G+P+++LI F+ G +++ Q A  L +FGA
Sbjct: 139 ASLSTATLKNKLRWPDFWLTCEK----VGADGLPIILLIGFLMGLIMSFQSAVSLMRFGA 194

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
           EIF  +++ ++  RE+G ++TA+++AGR+GSA  AEIG+MK+NEE+DA+ TMGL+ V  L
Sbjct: 195 EIFVPNMLGLVMFRELGPMVTAILLAGRTGSAFAAEIGTMKVNEELDALNTMGLNPVSFL 254

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PR+ A +   PLLT+  NF +++G ++V+      P A +  R        +   G+I
Sbjct: 255 VLPRVLATVCMTPLLTLFFNFMSLVGGALVMLS-MGYPLATYCGRVFENVQWMDFSGGMI 313

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           KA   +  +  +  + G      ++++G   T+ VV  I ++ + D +FA+ +F  GI
Sbjct: 314 KAVVFSFLVAGIGCQRGLVTKSGASAVGDSTTSAVVSGIILIAVFDGIFAVIFFLTGI 371


>gi|167627644|ref|YP_001678144.1| ABC-type transport system permease [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167597645|gb|ABZ87643.1| ABC-type transport system permease protein [Francisella
           philomiragia subsp. philomiragia ATCC 25017]
          Length = 365

 Score =  150 bits (379), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 171/324 (52%), Gaps = 4/324 (1%)

Query: 43  DLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF 102
           DL+ +T +DT GA +I+   +     +  + +    E+  +L+    +      + + S 
Sbjct: 41  DLTKVTLLDTAGAYIIIKTAKNLS--LSKENIIFANEKDKNLVDIVFKNFPSTAEEELSS 98

Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162
             N   N  Y +GK     +++  +    LG +    G        +K F   ++   Y 
Sbjct: 99  KSNVVFNSIYTLGKNTNNLLSEIKTSISFLGAIF--LGYITLIRRPYKAFFSIVLNICYD 156

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
             +  + +VIL+S + G V+       L Q+G +IF +D++ I   RE   L TA++IAG
Sbjct: 157 STIRALSIVILLSLIIGLVLTYLPLNLLMQYGTQIFVVDMLGISSFREFAPLFTAIIIAG 216

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           RSGSA  +EIG MK+NEEIDA++T+G D ++ L+ PRI AL+ISLP+LT++A  + I G 
Sbjct: 217 RSGSAFTSEIGIMKVNEEIDALQTIGEDPMQRLVLPRITALVISLPVLTVIAMIANIAGG 276

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
            I+      I    F  R  S   + + + GL+K PF A  I  +   +G +V   S S+
Sbjct: 277 IIIADLIAGITPLQFIERLFSNVNVNHFYIGLLKTPFFALVIAGIGCHQGLSVKRDSQSV 336

Query: 343 GKKVTTCVVQSISIVIIIDSLFAI 366
           GK  TT VV SI ++I++D++FA+
Sbjct: 337 GKATTTSVVYSIFLIILVDAIFAV 360


>gi|300114239|ref|YP_003760814.1| hypothetical protein Nwat_1606 [Nitrosococcus watsonii C-113]
 gi|299540176|gb|ADJ28493.1| protein of unknown function DUF140 [Nitrosococcus watsonii C-113]
          Length = 376

 Score =  150 bits (379), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 127/375 (33%), Positives = 204/375 (54%), Gaps = 17/375 (4%)

Query: 4   NGITVFRFAGNWKSPEISEIAD--DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           NG+ V    G+W     +E+    DV  A  +   + +A V+LS +  +DT GA L++  
Sbjct: 12  NGLHVI---GDWTLEYYAELQSRIDVFKAQAEKNNTLNATVELSGLNRLDTAGAVLLVEL 68

Query: 62  M--EKYHGKIKL-QGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
           +  E+    +K   G++     L   +  T    +  Q+  RS        L    G++I
Sbjct: 69  LGAERLAAFVKEGSGLTPARRALLDAVVRTMSMPLAPQRQARS----PLVALLAGTGERI 124

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGF-LLSLIRQMYYVGVSGVPVVILISFV 177
             F      Q  +LG +    G   A+ ++   + L +L+ Q+   G++ + +V L++F+
Sbjct: 125 ELFWRQ---QLLLLGFIGLILGSLTATFWRPNRWRLTALVAQIQQTGLNAIGIVALLTFL 181

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            GAV+A  GA  L  FGA I+++DL++   LRE GVLL A+++AGR+ SA  A+IGSMK 
Sbjct: 182 VGAVVAFLGATVLQNFGATIYTVDLIAFSFLREFGVLLAAILLAGRTASAFTAQIGSMKA 241

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
           NEEIDA+RT+GL    +L+ PR+ AL++SLP+LT +   S ++G  +V     DI  A+ 
Sbjct: 242 NEEIDALRTLGLSTAELLVLPRVLALLLSLPILTFIGMLSGMLGGGLVCLVVLDIS-ALQ 300

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
           F       +L +   GL KAP  A  I  +   EGF V   + S+G+  T+ VVQSI +V
Sbjct: 301 FVTILQGISLKHFLVGLSKAPIFAFFIAAIGCLEGFKVSGSAQSVGEHTTSSVVQSIFMV 360

Query: 358 IIIDSLFAIFYFAIG 372
           I++D++ A+F+  +G
Sbjct: 361 ILLDAIAALFFMEMG 375


>gi|319956950|ref|YP_004168213.1| hypothetical protein Nitsa_1211 [Nitratifractor salsuginis DSM
           16511]
 gi|319419354|gb|ADV46464.1| protein of unknown function DUF140 [Nitratifractor salsuginis DSM
           16511]
          Length = 371

 Score =  150 bits (379), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/342 (31%), Positives = 170/342 (49%), Gaps = 18/342 (5%)

Query: 36  QSDSAIVDLSAITEIDTIG---AELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKK 92
           ++    +D   +   D+ G      +   M+K     ++ G+    E++  LI    R  
Sbjct: 42  ETPRCRIDFGKVQRFDSAGILLLLELRERMKKAGKACEITGLDEKKEKMLHLI---ERGY 98

Query: 93  IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILG-LVISNTGEFCASSYKFKG 151
            +   P+R       + L + IGK  V+ +       H LG L +S    F    +K   
Sbjct: 99  GEEPLPKRR------EGLLWRIGKATVEELKVVRDFFHFLGELSVS----FLRLLFKPSN 148

Query: 152 FLL-SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210
           F +   +  + + GV+ + ++ L SF+ G VIA +   QL QFGA+I+ +D + I   RE
Sbjct: 149 FRMRETVYHIQHSGVNALFIIGLTSFLVGLVIAYESLVQLVQFGADIYVVDGIGIAITRE 208

Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
           +G ++TA++IAGRS S+  AEIG+MKI EEI A++T+G D    L+ PRI A++I+LPLL
Sbjct: 209 LGPMITAIVIAGRSASSYAAEIGTMKITEEIAAMQTLGFDPFYFLVIPRIVAMMIALPLL 268

Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330
              ++   I+G  I      D+ F  F  R        +   G++K PF A  I      
Sbjct: 269 IFFSDVIGILGGMIATKVQVDLSFTFFIERLQEVLAAKHYILGIVKGPFFALIIAATGCF 328

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
            GF V   + S+G + T  VV +I  VI  D+LFA+ Y  +G
Sbjct: 329 HGFRVTGDTESIGIETTASVVHAIFFVIACDALFAVIYTQLG 370


>gi|186474974|ref|YP_001856444.1| hypothetical protein Bphy_0205 [Burkholderia phymatum STM815]
 gi|184191433|gb|ACC69398.1| protein of unknown function DUF140 [Burkholderia phymatum STM815]
          Length = 379

 Score =  150 bits (379), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 109/379 (28%), Positives = 186/379 (49%), Gaps = 32/379 (8%)

Query: 8   VFRFAGNWKS-------------PEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG 54
           + R +G W +             P + E+ D          ++  A  DLS +  +D +G
Sbjct: 19  IVRLSGQWTALALARDRLHGQALPRLRELVDS---------RAHVAQWDLSNVERMDHVG 69

Query: 55  AELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI 114
            +  ++ +  Y     L  ++     +F  I+     + +N +P R F  + F  L    
Sbjct: 70  GQ-ALWRVWGYKLPRDLVALNDTQRDIFDRIALLDTVR-ENPEPVRRF--DPFTQL---- 121

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
           G  I  F+        + G VI +     A + K   +   +   +Y  G   +P+  L+
Sbjct: 122 GLGIFSFVEHVYGGVAMFGRVILDLLSI-ARNPKLAPWK-EISANVYSAGTQALPITALV 179

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           +F+ G V++   A QL  FGA  F ++++ +  LRE+G +L+A+++AGRSGSAI A+IG 
Sbjct: 180 AFLIGIVLSYLSAQQLRLFGANQFIVNILGMSVLRELGPVLSAILVAGRSGSAITAQIGV 239

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           M++ EE+DA+R MG+     LI PR+ AL +++PLL +  N  +++G ++       I  
Sbjct: 240 MRVTEELDAMRVMGIPHGLRLILPRVIALSLAMPLLVMWTNIISLLGGALAAKLVLQIDV 299

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
           + F         +AN++ GL K       I I     GF +  +S SLG+  TT VV SI
Sbjct: 300 SYFVRALPGVVPVANLWIGLGKGMVFGMLIAIAGCHFGFRIKANSQSLGEGTTTSVVSSI 359

Query: 355 SIVIIIDSLFAIFYFAIGI 373
           +IVI+ D++FAI +  +G+
Sbjct: 360 TIVILADAVFAILFQNVGL 378


>gi|206559095|ref|YP_002229855.1| hypothetical protein BCAL0697 [Burkholderia cenocepacia J2315]
 gi|198035132|emb|CAR51006.1| putative membrane protein [Burkholderia cenocepacia J2315]
          Length = 374

 Score =  150 bits (378), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 175/364 (48%), Gaps = 11/364 (3%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           R  G W +  ++     V   +        +  DLS I  +D +G + +     +  G+ 
Sbjct: 21  RLTGQWTALALARNRGAVARRVASIATGRVSEWDLSGIERLDHVGGQALW----RVWGRK 76

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
              GV+    Q  ++     R   + + P+R    +    L    G+ I  F        
Sbjct: 77  LPAGVALSATQ-RTIFERIERLDSEREAPERVVRVDPVTRL----GQAIFSFGEHLQGGI 131

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
            + GLVI +                S    +Y  G   +P+  L++F+ G V++   A Q
Sbjct: 132 AMFGLVILDALSVLRRPQTMPWRETSA--NIYSAGAQALPITALVAFLIGIVLSYLSAQQ 189

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R MG+
Sbjct: 190 LQTFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVMGI 249

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
                L+ PR+ AL +++PLL +  N  A+ G +I       I    F         +AN
Sbjct: 250 PHGLRLVLPRVLALGVAMPLLVMWTNIIALTGGAIAAKFVLGIDVNYFVRSLPGVVPIAN 309

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           ++ GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI + 
Sbjct: 310 LYIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAILFQ 369

Query: 370 AIGI 373
            +G+
Sbjct: 370 NVGL 373


>gi|15606674|ref|NP_214054.1| hypothetical protein aq_1530 [Aquifex aeolicus VF5]
 gi|2983906|gb|AAC07457.1| hypothetical protein aq_1530 [Aquifex aeolicus VF5]
          Length = 340

 Score =  149 bits (377), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 109/346 (31%), Positives = 182/346 (52%), Gaps = 29/346 (8%)

Query: 29  MAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI-KLQGVSTHIEQLFSLISF 87
           + I K+I+     +DLS + ++DT GA  +   +++ +  + +++G   H+E L  L+  
Sbjct: 23  LKIPKNIEK----IDLSDLKKLDTFGATFLALLIKENNIPLERVEGGEKHVE-LIKLV-- 75

Query: 88  THRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSY 147
               K+  + P++   + S KNL                S    LGL + ++ ++    +
Sbjct: 76  LDNLKLPKEIPEKKVSF-SLKNLF---------------SFPEFLGLFLIHSFKYI-KQF 118

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           +F  F     +++   G+  V +++ +SF+ G VIA Q A QL  FGA IF +DL+ I  
Sbjct: 119 EFSAFF----KELQTSGLGSVLILVSLSFLIGVVIAYQSAVQLRAFGAGIFIVDLVGIST 174

Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267
            RE+  LLT +++AGR  S   A +G  KINEEIDA+R MGL  V +L+ PR+ A +I  
Sbjct: 175 FRELAPLLTGIILAGRVSSGYTANVGLRKINEEIDALRVMGLSPVVLLVLPRVLASLIYT 234

Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327
           PLLT L+  + ++G +I+   +  I    FF +        ++F G +K PF   AI + 
Sbjct: 235 PLLTSLSAVAMLLGGAIIAQVFLGIGVEEFFKKLPEAVAKEDLFAGYVKTPFFGVAIALN 294

Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
            +  GF       SLG  V   VV  IS++I++D++F+I +  +GI
Sbjct: 295 GVYYGFLTDPKPESLGYSVMRSVVTGISVIILLDAVFSIIFLRLGI 340


>gi|294054794|ref|YP_003548452.1| protein of unknown function DUF140 [Coraliomargarita akajimensis
           DSM 45221]
 gi|293614127|gb|ADE54282.1| protein of unknown function DUF140 [Coraliomargarita akajimensis
           DSM 45221]
          Length = 366

 Score =  149 bits (376), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 130/210 (61%)

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           GV  +P+V+L++ +TG +IA  G  QL +F A+IF  DL+ +   RE+G ++T V++AGR
Sbjct: 157 GVQALPIVMLLNCLTGLIIAFIGVIQLQKFAADIFVADLVGLATARELGAVITGVIMAGR 216

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           +G+A  A+IGSM++NEE+DA+ T G+  ++ L+ PR+ AL++ +PLL ++A+   I+G  
Sbjct: 217 TGAAFAAQIGSMQVNEEVDALTTFGISPMQFLVVPRVVALVLMMPLLGVVADIVGILGGL 276

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           I+     D+    +F++ H    L + F G+ K       IGI     G   G  ++S+G
Sbjct: 277 IIAVSISDVSVIQYFNQVHQAVGLNDFFIGIFKCAVFGLIIGIAGCYRGLNCGRDASSVG 336

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
              T+ VV SI+ +++ D++FA+    +GI
Sbjct: 337 LATTSAVVTSITWLVVADAIFAVLCHLLGI 366


>gi|307825468|ref|ZP_07655686.1| protein of unknown function DUF140 [Methylobacter tundripaludum
           SV96]
 gi|307733354|gb|EFO04213.1| protein of unknown function DUF140 [Methylobacter tundripaludum
           SV96]
          Length = 379

 Score =  149 bits (376), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 79/214 (36%), Positives = 129/214 (60%)

Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219
           +Y  GV  + +  L+ F+ G V++   A QL  FGAEI+ ID++ +  +RE+G LL A++
Sbjct: 165 IYESGVRALGITALVGFLIGIVLSYLSALQLKIFGAEIYIIDILGLSVIRELGPLLAAIL 224

Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279
           +AGRSGSA+ A+IG M++ EE+DA+  MG+     L  P++ AL I LPL+ +  +  A+
Sbjct: 225 VAGRSGSAMTAQIGIMRVTEELDALSAMGISHSLRLTLPKVMALTIVLPLIGVWTSALAL 284

Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339
           IG  +      DI +  FF +      L N+F GL K+      I ++A   GF +  ++
Sbjct: 285 IGGMVSAQNTLDISYQQFFLKLPDVVPLTNVFIGLGKSAVFGLMIALIACHFGFRIKPNT 344

Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
            SLG + T  VV +I++VI++D++FAI +  +G+
Sbjct: 345 ESLGNETTNSVVAAITVVIMVDAVFAILFMNVGM 378


>gi|326405508|ref|YP_004285590.1| putative ABC transporter permease [Acidiphilium multivorum AIU301]
 gi|325052370|dbj|BAJ82708.1| putative ABC transporter permease protein [Acidiphilium multivorum
           AIU301]
          Length = 362

 Score =  149 bits (376), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 170/336 (50%), Gaps = 27/336 (8%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
           +DLS    IDT GA L++     + G+ + QG++   E L +        +++   P+  
Sbjct: 48  LDLSRAARIDTSGAALLLALERGHDGETRWQGLTPAAEGLIA--------RLRAALPETG 99

Query: 102 FFYNSFKNLH-----YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156
                 + +        +G +I  F  ++         +++ TG      +   G   + 
Sbjct: 100 APPPPPRTVRGPGPLRTLGVRI-AFFGET---------ILATTGLPARRRFLRGG---NF 146

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
            R     G   +P+VI++ F+ G ++A Q A  + QFGA+I+   L+S+   RE+G LL 
Sbjct: 147 FRIAERAGAQALPLVIMLGFLIGMILAFQSAIPMRQFGADIYVAALVSLSLFRELGPLLA 206

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV++AGR+GSA  AE+G+M +NEE+ A+ TMG+D   +L+ PR+ A ++ +P L +  + 
Sbjct: 207 AVILAGRTGSAFAAELGTMMVNEEVAALTTMGIDPGTMLVIPRMAAAMLVMPALALGIDV 266

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           S ++G   V+      P +   ++    A+  ++  GL+K+     A+G++  + G   G
Sbjct: 267 SGVLGMGFVM-GILGFPPSAIVAQMQMAASPHDVLLGLMKSVVFGAAVGLIGCRAGLTAG 325

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
               ++G+  T+ VV  I   I+ID LFA+  + +G
Sbjct: 326 GGPRAVGEAATSAVVGGIVATILIDGLFAVVLYRLG 361


>gi|237747194|ref|ZP_04577674.1| ABC transport system permease [Oxalobacter formigenes HOxBLS]
 gi|229378545|gb|EEO28636.1| ABC transport system permease [Oxalobacter formigenes HOxBLS]
          Length = 374

 Score =  149 bits (375), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 188/368 (51%), Gaps = 25/368 (6%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQS----DSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
           GNW+   ++  A  V+  I  +++S     S   DL+ I E+D IGA+L+     K   +
Sbjct: 23  GNWRVESLA--ASGVINRIRSTVRSFSKKGSVSWDLTQILELDYIGAQLLWDNWNKTRPR 80

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
             L  V++   +LFS +      ++  +KP            H+ +  +I KF   +   
Sbjct: 81  ELL--VTSEQNKLFSRLESAGNLQLPAEKPA-----------HWQLFGRIRKFPQAAAEH 127

Query: 129 -AHILGLV---ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
            + I+GLV   + +   F  + ++  G    +   +Y+ G   + +  ++ F+ G V++ 
Sbjct: 128 FSGIVGLVGQLMIDLARFAKAPHR--GPWTEISANIYHAGAQALGITAIVGFLIGVVLSY 185

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
             A QL  FG ++F ++L+ +  +RE+G LL A+++AGRSGS++ A++G M++ EE+ A+
Sbjct: 186 LSAQQLHMFGGDVFLVNLLGMSVIRELGPLLAAILVAGRSGSSMTAQLGVMRVTEELSAM 245

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           + MG+     LI P++ AL I +PLL I  +  A++G  +       +    F S   + 
Sbjct: 246 QVMGMSHGFRLIMPKVIALSIVMPLLIIWTDIVALLGGMLAASFEIGLSIPYFLSALPNA 305

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             +AN + G+ K       I ++A   G  +  ++ SLG+  T  VV SI+IVI+ D++F
Sbjct: 306 VPMANFWIGIGKGIVFGILIALIACYYGMKIKPNTESLGQGTTNSVVTSITIVILADAIF 365

Query: 365 AIFYFAIG 372
           A+    +G
Sbjct: 366 AVVLQGVG 373


>gi|221069470|ref|ZP_03545575.1| protein of unknown function DUF140 [Comamonas testosteroni KF-1]
 gi|220714493|gb|EED69861.1| protein of unknown function DUF140 [Comamonas testosteroni KF-1]
          Length = 375

 Score =  149 bits (375), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 171/332 (51%), Gaps = 14/332 (4%)

Query: 43  DLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF 102
           DL  +  +D IGA+L+    E++ G+     + T   Q   L       ++   KP+ S 
Sbjct: 55  DLQQMVWLDHIGAQLLW---EQW-GRTWPARLLTTKNQRSMLERVARFSEVPEAKPEPSG 110

Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQ-AHILGLVISNTGEFCASSY-KFKGFLLSLIRQM 160
           +      L    G+ ++    D+C   ++++ LV     +        F+G    +   +
Sbjct: 111 WMCEVNRL----GQMVI----DACGHFSNLIQLVGQLLLDCLRLLRNPFRGPWRDISGHL 162

Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
           Y  G + +P+  L+ F+ G V+A   A QL QFGAE F ++++ I  +RE+G LL A+++
Sbjct: 163 YATGATALPITALVGFLIGVVLAYLMALQLRQFGAESFIVNILGISLIRELGPLLAAILV 222

Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280
           AGRSGSAI A+IG M++ EE+DA++ MG+     L+ PR  AL +S+PL+ +    +A+ 
Sbjct: 223 AGRSGSAITAQIGVMRVTEELDAMQVMGISQGYRLVLPRALALAVSMPLVALWTILAALA 282

Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
           G  +      DI  + F     +   + N+   + K+      I ++    G  V  ++ 
Sbjct: 283 GGMVAADLTMDITPSYFIQSLPAAVKIGNLVLAMGKSVVFGVLIALIGCHWGLKVEPNTQ 342

Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           SLG+  T  VV SI++VII+D++FAI +  +G
Sbjct: 343 SLGRGTTAAVVSSITMVIIVDAIFAILFRNVG 374


>gi|74316265|ref|YP_314005.1| ABC transporter permease [Thiobacillus denitrificans ATCC 25259]
 gi|74055760|gb|AAZ96200.1| ABC transport system permease protein [Thiobacillus denitrificans
           ATCC 25259]
          Length = 364

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/219 (37%), Positives = 134/219 (61%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
            L  Q+  V V  +P+V  + F+ G V A     Q  QFGA IF +D + +  LREI  +
Sbjct: 146 ELAAQVRDVFVGAIPIVSGMMFLLGVVFAYLLGDQARQFGANIFVVDGLLLAVLREISPV 205

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           + AV++AGR+G+AI A++G+MK+ EEIDAI T+GL  + +L+ PR+ ALI+++PLL  + 
Sbjct: 206 IVAVLVAGRTGAAITAQLGTMKVAEEIDAIATLGLSPLAVLVIPRVLALIVAMPLLVFIG 265

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
           + + ++G  +V+ +   I   +F  R +    L  +  GL KAP  A  I +++ + G A
Sbjct: 266 DIAGLVGGMLVVQQQLAISPPIFLDRLYDVILLKTLMVGLGKAPVFALFIALISCRMGLA 325

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           V   + S+G   T+ VVQS+  VII++++FA+ +  +GI
Sbjct: 326 VSRDARSVGVNTTSTVVQSLVAVIILNAVFAVAFVRLGI 364


>gi|302342029|ref|YP_003806558.1| hypothetical protein Deba_0592 [Desulfarculus baarsii DSM 2075]
 gi|301638642|gb|ADK83964.1| protein of unknown function DUF140 [Desulfarculus baarsii DSM 2075]
          Length = 380

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 179/342 (52%), Gaps = 14/342 (4%)

Query: 33  KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK--IKLQGVSTHIEQLFSLISFTH- 89
           K +   S ++DLS +  +DT GA  +  +         ++L+   +    + +LI     
Sbjct: 47  KELAPRSVLLDLSRLDYLDTSGAMAVKIWAAAPPQDLAVRLEAGQSRFRDMLALIDVDQV 106

Query: 90  RKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKF 149
           RK   N   + +            +G++I + +         + +V++            
Sbjct: 107 RKPAINPDKRDAGMLEGMGQSARRMGEQIGQLLAFVGQATKSVLMVVARPATLR------ 160

Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209
            G +L+ ++Q   VGV G+P+V LI  + G ++A   + QL  FGA+++   L+++  +R
Sbjct: 161 MGDVLAYMQQ---VGVDGLPIVSLIGLLLGMIMAFMSSLQLKSFGADVYVATLVAVAMVR 217

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
           E+G ++TA+++AGRSGS+  AEIG+MK+NEE+DA+  MG D V  L  P++ A ++ +PL
Sbjct: 218 ELGPIMTAILVAGRSGSSFAAEIGTMKVNEEVDALTVMGYDPVIFLALPKVIAAVLMVPL 277

Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329
           LT+ +  +AI+G  IV     D+    + +   S+    ++ T + KA      I ++  
Sbjct: 278 LTLFSIAAAIMGGLIVGVAGLDLTPYTYLNESISSFDAGDLMTSMFKAAVFGLLIAVIGC 337

Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI--FYF 369
           ++GF V   +  +GK  T+ VV ++ ++I+ DS+FAI  +YF
Sbjct: 338 QKGFTVEGGAAGVGKATTSAVVAALFLIIVTDSVFAIIQYYF 379


>gi|160872209|ref|ZP_02062341.1| ABC transporter, permease [Rickettsiella grylli]
 gi|159121008|gb|EDP46346.1| ABC transporter, permease [Rickettsiella grylli]
          Length = 375

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/352 (33%), Positives = 194/352 (55%), Gaps = 14/352 (3%)

Query: 25  DDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ--GVSTHIEQLF 82
           D     +N+ I+S   I++ + IT++D+ GA  +  + ++   K K+   G+++  + LF
Sbjct: 35  DQSFQKLNRHIES-PLILNAAFITQMDSSGAWQLYQWKKQLAKKRKVHLIGLNSKHQALF 93

Query: 83  SLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGL-VISNTGE 141
            +I  T  ++IK    +++F     + L   +GKK ++  N+  S    +G   IS    
Sbjct: 94  GMIE-TAAEQIKPLPREKTF-----RGLGL-LGKKSIEQWNELKSYLAFIGKNFISACHA 146

Query: 142 FCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSID 201
           F          +L +I      G+  + ++ L+SF+ G V+  Q  FQL  FGA  F ID
Sbjct: 147 FLHPRQLRVRAILGIIEN---TGLDALGIIALLSFMIGIVLTYQMGFQLKNFGATRFIID 203

Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261
           L+ +  LRE   LLTA+M+AGRSGSA  A++G MKI EEIDA+ TMG+   ++LI PR+W
Sbjct: 204 LLGLAILREFSPLLTAIMVAGRSGSAFTAQLGMMKIKEEIDALNTMGVLPRQLLILPRLW 263

Query: 262 ALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMA 321
            L+++LPLLT+ A+   ++G   +     +I +  F  RF    +L+++  G+ KAP  A
Sbjct: 264 GLLLALPLLTVWADIFGLLGGMAMTHNMMNISYLDFLHRFPKVVSLSSLIIGVGKAPVFA 323

Query: 322 CAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
             I   A  +G  V   ++S+G++ T  VVQ I  +I+ D+LF+I +  + I
Sbjct: 324 LIIASTACFQGLRVSGSADSVGRQTTRSVVQGIFFIIVADALFSILFSTLNI 375


>gi|183220168|ref|YP_001838164.1| ABC transporter permease [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189910288|ref|YP_001961843.1| ABC transporter membrane protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167774964|gb|ABZ93265.1| Membrane protein of an ABC transporter complex [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167778590|gb|ABZ96888.1| ABC-type transport system, permease [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
          Length = 374

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/294 (32%), Positives = 161/294 (54%), Gaps = 16/294 (5%)

Query: 87  FTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASS 146
           F +R  I N   ++   YN    +     ++I K   DS  +   L   I+ TGE   S 
Sbjct: 90  FQYRLNITNDDSKK---YNEQLAVSLRKSEQIGKLTIDSLLEFKYL---ITFTGELTVSF 143

Query: 147 YKFKGFL-------LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           ++   FL           R    +GV+  P++ +I F+ G +++ Q A  + +FGAEIF 
Sbjct: 144 WR--SFLHPSKIRWKDSFRVAESMGVNAFPIIAMIGFLLGLIMSFQSAIPMRRFGAEIFV 201

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
            +L+ +   RE+G L+TA +++GRSGS+  AE+G+MK++EEIDA+ TMGL  V+ LI PR
Sbjct: 202 ANLVGLSLFRELGPLMTAFILSGRSGSSFAAELGTMKVSEEIDALTTMGLPPVQFLIIPR 261

Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319
           + A +I  PLLTI+ N   +IG ++V+   +  P   F ++ +    L++I  GL+K+ F
Sbjct: 262 LVASLIVTPLLTIVFNLFGLIGGAVVLVS-FGFPLITFVNQVNIAVGLSDILGGLLKSYF 320

Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
               I  +    G      + ++G+  T+ VV SI +V I+D +F++ +F + I
Sbjct: 321 FGMIIASIGCYRGLKTASGAGAVGESTTSAVVGSIILVSILDGIFSVLFFYLRI 374


>gi|192359616|ref|YP_001982090.1| ABC-type transport system, permease [Cellvibrio japonicus Ueda107]
 gi|190685781|gb|ACE83459.1| ABC-type transport system, permease component [Cellvibrio japonicus
           Ueda107]
          Length = 375

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 131/210 (62%), Gaps = 1/210 (0%)

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G   + +V LI+ + G ++A  G+ QL Q GA+++  DL+++  +RE+G L+TAV++AGR
Sbjct: 167 GPRALAIVTLIALLVGMILAYLGSVQLRQLGAQVYVADLVALGMVREMGALMTAVIMAGR 226

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           +G+A  A++G+M++NEEIDA++TMG+  +  L+ PR+ AL++ +PLL I AN   ++G +
Sbjct: 227 TGAAYAAQLGTMQVNEEIDALKTMGISSIEFLVLPRLLALVLVMPLLCIYANVIGMVGGA 286

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           +V     D+ F  +  +        +I TGL+K+ F    I I   + G   G +S+++G
Sbjct: 287 LVA-TSMDVNFIQYILQTQGAVGWVDISTGLVKSVFFGVLIAIAGCQAGIHCGRNSDAVG 345

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
              T  VV++I  +++ D+ F I Y  +GI
Sbjct: 346 MAATNAVVRAIVYLVVADAAFNILYDKLGI 375


>gi|116690919|ref|YP_836542.1| hypothetical protein Bcen2424_2901 [Burkholderia cenocepacia
           HI2424]
 gi|116649008|gb|ABK09649.1| protein of unknown function DUF140 [Burkholderia cenocepacia
           HI2424]
          Length = 447

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 183/380 (48%), Gaps = 43/380 (11%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           R  G W +  ++     V   I        +  DLS I  +D +G + +     +  G+ 
Sbjct: 94  RLTGQWTALSLARNRGAVARRIASIAAGRVSEWDLSGIERLDHVGGQALW----RVWGRK 149

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
              GV+    Q  ++     R   + + P+R                 IV+F  D  ++ 
Sbjct: 150 LPAGVALSATQ-RTIFERIERLDSEREAPER-----------------IVRF--DPVTR- 188

Query: 130 HILGLVISNTGEFCASSYKFKGFL----LSLIRQ------------MYYVGVSGVPVVIL 173
             LGL I   GE         G +    LS++R+            +Y  G   +P+  L
Sbjct: 189 --LGLAIFAFGEHLQGGITMFGRVILDALSVLRRPKTMPWKETSANIYSAGAQALPITAL 246

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           ++F+ G V++   A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG
Sbjct: 247 VAFLIGIVLSYLSAQQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIG 306

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
            M++ EE+DA+R MG+     LI PR+ AL +++PLL +  N  A+ G ++       I 
Sbjct: 307 VMRVTEELDAMRVMGIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKLVLGID 366

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              F         +AN++ G+ K       I +VA   GF +  +S SLG+  TT VV S
Sbjct: 367 INYFVRSLPGVVPIANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSS 426

Query: 354 ISIVIIIDSLFAIFYFAIGI 373
           I++VI+ D++FAI +  +G+
Sbjct: 427 ITVVILADAVFAILFQNVGL 446


>gi|254247077|ref|ZP_04940398.1| hypothetical protein BCPG_01856 [Burkholderia cenocepacia PC184]
 gi|124871853|gb|EAY63569.1| hypothetical protein BCPG_01856 [Burkholderia cenocepacia PC184]
          Length = 425

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 183/380 (48%), Gaps = 43/380 (11%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           R  G W +  ++     V   I        +  DLS I  +D +G + +     +  G+ 
Sbjct: 72  RLTGQWTALSLARNRGAVARRIASIAAGRVSEWDLSGIERLDHVGGQALW----RVWGRK 127

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
              GV+    Q  ++     R   + + P+R                 IV+F  D  ++ 
Sbjct: 128 LPAGVALSATQ-RTIFERIERLDSEREAPER-----------------IVRF--DPVTR- 166

Query: 130 HILGLVISNTGEFCASSYKFKGFL----LSLIRQ------------MYYVGVSGVPVVIL 173
             LGL I   GE         G +    LS++R+            +Y  G   +P+  L
Sbjct: 167 --LGLAIFAFGEHLQGGIAMFGRVILDALSVLRRPKTMPWKEISANIYSAGAQALPITAL 224

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           ++F+ G V++   A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG
Sbjct: 225 VAFLIGIVLSYLSAQQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIG 284

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
            M++ EE+DA+R MG+     LI PR+ AL +++PLL +  N  A+ G ++       I 
Sbjct: 285 VMRVTEELDAMRVMGIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKLVLGID 344

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              F         +AN++ G+ K       I +VA   GF +  +S SLG+  TT VV S
Sbjct: 345 INYFVRSLPGVVPIANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSS 404

Query: 354 ISIVIIIDSLFAIFYFAIGI 373
           I++VI+ D++FAI +  +G+
Sbjct: 405 ITVVILADAVFAILFQNVGL 424


>gi|170734244|ref|YP_001766191.1| hypothetical protein Bcenmc03_2910 [Burkholderia cenocepacia MC0-3]
 gi|169817486|gb|ACA92069.1| protein of unknown function DUF140 [Burkholderia cenocepacia MC0-3]
          Length = 374

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 183/380 (48%), Gaps = 43/380 (11%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           R  G W +  ++     V   I        +  DLS I  +D +G + +     +  G+ 
Sbjct: 21  RLTGQWTALSLARNRGAVARRIASIAAGRVSEWDLSGIERLDHVGGQALW----RVWGRK 76

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
              GV+    Q  ++     R   + + P+R                 IV+F  D  ++ 
Sbjct: 77  LPAGVALSATQ-RTIFERIERLDSEREAPER-----------------IVRF--DPVTR- 115

Query: 130 HILGLVISNTGEFCASSYKFKGFL----LSLIRQ------------MYYVGVSGVPVVIL 173
             LGL I   GE         G +    LS++R+            +Y  G   +P+  L
Sbjct: 116 --LGLAIFAFGEHLQGGIAMFGRVILDALSVLRRPKTMPWKETSANIYSAGAQALPITAL 173

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           ++F+ G V++   A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG
Sbjct: 174 VAFLIGIVLSYLSAQQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIG 233

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
            M++ EE+DA+R MG+     LI PR+ AL +++PLL +  N  A+ G ++       I 
Sbjct: 234 VMRVTEELDAMRVMGIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKLVLGID 293

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              F         +AN++ G+ K       I +VA   GF +  +S SLG+  TT VV S
Sbjct: 294 INYFVRSLPGVVPIANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSS 353

Query: 354 ISIVIIIDSLFAIFYFAIGI 373
           I++VI+ D++FAI +  +G+
Sbjct: 354 ITVVILADAVFAILFQNVGL 373


>gi|27363501|ref|NP_759029.1| putative ABC transport system permease [Vibrio vulnificus CMCP6]
 gi|27359617|gb|AAO08556.1| Putative ABC transport system permease protein [Vibrio vulnificus
           CMCP6]
          Length = 357

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 81/204 (39%), Positives = 125/204 (61%), Gaps = 1/204 (0%)

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G   VP+++LI F+ G +IA +      QFGA +F  D + I  LRE+G L+TA++ AGR
Sbjct: 153 GADAVPIIMLIGFLMGVIIAFEIGLVAEQFGAVLFVADGIGISMLRELGPLMTAIVFAGR 212

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           +G+A  AEIG+ K+NEEI+A+RT G+  V  L+ PRI+A I+ LPLLT+ A+   + G +
Sbjct: 213 TGAAFAAEIGTQKVNEEINALRTFGISPVEFLVIPRIYASILVLPLLTVFADIIGVFGGA 272

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           +V+ K +DI F  ++ +  S  ++ +   GLIKA      I ++  + G A G  S S+G
Sbjct: 273 LVLLK-FDISFVQYYHQLLSALSIWDFGFGLIKATTFGFIIAVIGCERGLATGQGSTSVG 331

Query: 344 KKVTTCVVQSISIVIIIDSLFAIF 367
              T+ VV SI  +++ID  F + 
Sbjct: 332 LAATSAVVSSIIWIVVIDGFFTVL 355


>gi|89256086|ref|YP_513448.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica LVS]
 gi|115314562|ref|YP_763285.1| ABC transporter ATP-binding protein [Francisella tularensis subsp.
           holarctica OSU18]
 gi|156502103|ref|YP_001428168.1| ABC transporter membrane protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|167010771|ref|ZP_02275702.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica FSC200]
 gi|254367414|ref|ZP_04983440.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica 257]
 gi|290954528|ref|ZP_06559149.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312044|ref|ZP_06802859.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica URFT1]
 gi|89143917|emb|CAJ79136.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica LVS]
 gi|115129461|gb|ABI82648.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Francisella tularensis subsp. holarctica OSU18]
 gi|134253230|gb|EBA52324.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica 257]
 gi|156252706|gb|ABU61212.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
          Length = 366

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 110/335 (32%), Positives = 173/335 (51%), Gaps = 24/335 (7%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKK-----IKNQ 96
           +D++ I  +DT GA    YF+ K    ++L    T  + +F      H+ K     + N 
Sbjct: 40  IDITKIQALDTAGA----YFILKVLKDLEL----TKEDLIFD----NHKDKNLIELVANN 87

Query: 97  KPQRSFFYNSFK-NLH----YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKG 151
            P R    NS K N+     Y +GK     + +  +    LG ++   G        ++ 
Sbjct: 88  FPTRVDKENSHKSNIVFTSIYTLGKNTNNLLQEIKASIGFLGAIL--LGYLTLIRKPYRS 145

Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211
           F   ++   Y   +  + +V+L+S + G V+       + Q+  +IF +D++ I   RE 
Sbjct: 146 FFSIVLNIAYDSTIKALSIVMLLSLIIGLVLTYLPLNLMMQYSTQIFVVDMLGISSFREF 205

Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271
             L TA++IAGRS SA  +EIG MK+NEEIDA++T+G D ++ L+ PRI ALIISLP+LT
Sbjct: 206 APLFTAIIIAGRSSSAFTSEIGIMKVNEEIDALQTIGEDPIQRLVLPRITALIISLPVLT 265

Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
           ++A  + II   I+      I    F  R  S   + + + GL+K PF A  I  +   +
Sbjct: 266 VIAMIANIISGIIIADVIAGITPLQFIERLFSNVNVNHFYIGLLKTPFFALVIAGIGCHQ 325

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           G AV   S S+GK  T  VV SI ++I+ID++FA+
Sbjct: 326 GLAVRRDSQSVGKATTNSVVYSIFLIIVIDAIFAV 360


>gi|94263506|ref|ZP_01287318.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93456144|gb|EAT06287.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 379

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 198/387 (51%), Gaps = 41/387 (10%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S +GI      G  ++  I  +  ++   + K+      ++D+  +  +D  G  L+++F
Sbjct: 19  SADGILHAVVRGRMEAGSIGPLWQELASKLKKT--RAGLVLDVEKVDYLDMSGQALLLHF 76

Query: 62  ---MEKYHGKIKLQGVST---HIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIG 115
              M+  +  ++++G+     HI++   +  F +R K   ++       ++ + L    G
Sbjct: 77  SRLMQDSNRPVEVRGLRPDFRHIQE--QIDCFDYRPKPLQRR------LSAVEEL----G 124

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCAS---------SYKFKGFLLSLIRQMYYVGVS 166
           +  V    D       +G   S  GEF +S         + ++K     ++  M  VG  
Sbjct: 125 RAAVNLGRD-------IGQFFSFVGEFVSSLAYCLAHPGTVRWK----DVLSHMENVGGR 173

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            V ++ L+ F+ G +IA Q A  L  FGAE+F   L+ +  +RE+G L+TA+++AGRSGS
Sbjct: 174 AVFIIALMGFLIGVIIAFQTAITLKTFGAEMFVAKLLGLSMVRELGPLVTAIILAGRSGS 233

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A  AEIG+MK NEEI+A++TMGL+ VR L+ PR+ A ++  PLL +     + IG ++V+
Sbjct: 234 AFAAEIGTMKTNEEINALQTMGLNPVRFLVVPRMLATMLVTPLLCVFFLLFSFIGGALVM 293

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
               D     +  +  ++  +A+   G++K    +  +  V    G   G  ++++G+  
Sbjct: 294 LS-MDFTLNSYVHQLSTSVGMADFLGGMVKVLVFSILVAWVGCVRGLQTGSGASAVGRST 352

Query: 347 TTCVVQSISIVIIIDSLFAIFYFAIGI 373
           T+ VV +I ++I+ D +FA+ Y+ +GI
Sbjct: 353 TSAVVSAIILIILADGIFAVVYYMLGI 379


>gi|94263144|ref|ZP_01286962.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93456515|gb|EAT06629.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 379

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 193/384 (50%), Gaps = 35/384 (9%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S +GI      G  ++  I  +  ++   + K+      ++D+  +  +D  G  L+++F
Sbjct: 19  SADGILHAVVRGRMEAGSIGPLWQELASKLKKT--RAGLVLDVEKVDYLDMSGQALLLHF 76

Query: 62  ---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
              M+  +  ++++G+      +   IS   R    ++  QR        +    +G+  
Sbjct: 77  SRLMQDGNLPVEIRGLHPDFRHIQEQIS---RFDCHSKPAQRRL------SAVEELGRAA 127

Query: 119 VKFINDSCSQAHILGLVISNTGEFCAS---------SYKFKGFLLSLIRQMYYVGVSGVP 169
           V    D       +G   S  GEF +S         + ++K     ++  M  VG   V 
Sbjct: 128 VNLGRD-------IGQFFSFVGEFVSSLAYCLAHPGTVRWK----DVLSHMENVGGRAVF 176

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ L+ F+ G +IA Q A  L  FGAE+F   L+ +  +RE+G L+TA+++AGRSGSA  
Sbjct: 177 IIALMGFLIGVIIAFQTAITLKTFGAEMFVAKLLGLSMVRELGPLVTAIILAGRSGSAFA 236

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG+MK NEEI+A++TMGL+ VR L+ PR+ A ++  PLL +     + IG ++V+   
Sbjct: 237 AEIGTMKTNEEINALQTMGLNPVRFLVVPRMLATMLVTPLLCVFFLLFSFIGGALVMLS- 295

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            D     +  +  ++  +A+   G++K    +  +  V    G   G  ++++G+  T+ 
Sbjct: 296 MDFTLNSYVHQLSTSVGMADFLGGMVKVLVFSILVAWVGCVRGLQTGSGASAVGRSTTSA 355

Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373
           VV +I ++I+ D +FA+ Y+ +GI
Sbjct: 356 VVSAIILIILADGIFAVVYYMLGI 379


>gi|319791003|ref|YP_004152643.1| hypothetical protein Varpa_0310 [Variovorax paradoxus EPS]
 gi|315593466|gb|ADU34532.1| protein of unknown function DUF140 [Variovorax paradoxus EPS]
          Length = 388

 Score =  146 bits (369), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 177/340 (52%), Gaps = 31/340 (9%)

Query: 43  DLSAITEIDTIGAELIM-YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ-- 99
           DL  I ++D IGA+L+  ++  ++   ++++  + H   L  +  +T    ++  K    
Sbjct: 67  DLRPIEQLDHIGAQLLWEHWRHEWPATLEME--AQHKAVLDQVAQYTVATPVEPPKTLAD 124

Query: 100 --RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYK-----FKGF 152
             R+F +N         G + +    D      ++G +  + G    + ++     F G 
Sbjct: 125 RIRTFSHN---------GPRAMVVARDFIG---LIGQLAIDVGTLIRAPHRAPWRDFSGH 172

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           L       Y  G + + +  L+  + G V+A   + QL  +GAE F ++++ +  +RE+G
Sbjct: 173 L-------YQFGATALHITALVGLLIGVVLAYLISQQLRNYGAEAFVVNILGLSLVRELG 225

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            +L AV+IAGRSGSAI A+IG M++ EE+DA+R MG+     L+ PR+ AL I++PL+++
Sbjct: 226 PVLAAVLIAGRSGSAITAQIGVMRVTEELDAMRVMGIPHGFRLVMPRVLALAIAMPLISL 285

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
             + +A++G  +      DI  A F S       +AN++  + K+      I ++    G
Sbjct: 286 WTSMAALLGGMLAADAALDISPAYFLSALPRAVPIANLWLAMAKSAVFGILIALIGCYFG 345

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
             V  ++ SLG+  T+ VV SI+ VI++D+LFA+ +  IG
Sbjct: 346 MKVKPNTESLGRGTTSSVVTSITAVILVDALFAVLFKGIG 385


>gi|88810292|ref|ZP_01125549.1| hypothetical protein NB231_14468 [Nitrococcus mobilis Nb-231]
 gi|88791922|gb|EAR23032.1| hypothetical protein NB231_14468 [Nitrococcus mobilis Nb-231]
          Length = 364

 Score =  146 bits (369), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 194/367 (52%), Gaps = 27/367 (7%)

Query: 12  AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH---GK 68
           +G+W    ++ +   +    N  + S    ++L  I+ +DT GA ++     +       
Sbjct: 13  SGDWSVERLAAVERQIRR--NAPMTSGEWRINLGEISTLDTAGAVMVQRLCRRLRTAGAS 70

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC-- 126
           ++L+ VS     +  L++     ++  ++P        + N    +G+++     D C  
Sbjct: 71  VQLEDVSAERHAVLKLVA--SEMEVTPRRP--------YSNPLERLGRRV----TDGCFG 116

Query: 127 --SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G + +++       ++ +   +++  ++   GV  +P++ L++F+ G V+A 
Sbjct: 117 ITEYLAFIGRLTADSLPRMLRPHRLRWHEIAV--ELERAGVMAIPIIGLLAFLIGIVMAY 174

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q    L  +GA IF +DL+ ++ LRE+G L+TAV++AGR+G++  A+IG+M + EE+DA+
Sbjct: 175 QSGDILQTYGANIFLVDLLGVIILREMGPLMTAVIVAGRTGASYTAQIGTMHLTEEVDAL 234

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           RTMG+    +L+ P+  AL+I+LPLLT+ A+   ++G  +V    Y + F VF  R   T
Sbjct: 235 RTMGVTPFEMLVLPKFLALLIALPLLTVWADAIGLLGGMLVSSLLYGVDFDVFLRRL-PT 293

Query: 305 ATLANIF-TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
           A   N+F  G+ KAP  A  I  +   +GF +   ++ +G+  T  VVQ I  VI+ D++
Sbjct: 294 AVPPNMFWVGIAKAPVFAALIASIGCYQGFRIRYSADEVGRYTTISVVQGIFWVIVADAV 353

Query: 364 FAIFYFA 370
           F+I  F+
Sbjct: 354 FSIVLFS 360


>gi|91786141|ref|YP_547093.1| hypothetical protein Bpro_0230 [Polaromonas sp. JS666]
 gi|91695366|gb|ABE42195.1| protein of unknown function DUF140 [Polaromonas sp. JS666]
          Length = 383

 Score =  146 bits (369), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 180/332 (54%), Gaps = 13/332 (3%)

Query: 43  DLSAITEIDTIGAELIM-YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
           DLS + ++D +GA+++  ++   +  +++++     +  L ++  F     +   KP+ S
Sbjct: 64  DLSGLEKLDHLGAQVLWNHWGRDWPAQLQVEPSQRAV--LETVAKFA----VVPPKPRGS 117

Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY 161
                +K+L   +G + +  ++ S     ++G ++ +        +  +G    L   +Y
Sbjct: 118 ----DWKDLLVLLGNRALDLVDHSKGLVRLVGQLLLDIIRLV--RHPKEGPWRDLSGHLY 171

Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221
           ++G + +P+  L+ F+ G V+A   + QL QFGA+ + ++++ I  +RE+G +L A++IA
Sbjct: 172 HIGATALPITALVGFLIGVVLAYLISQQLRQFGADAYIVNILGISLIRELGPVLAAILIA 231

Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281
           GRSGSAI A+IG M++ EE+DA+R MG+     L+ PR  AL + +PL+++    +A++G
Sbjct: 232 GRSGSAITAQIGVMRVTEELDAMRVMGIARGFRLVMPRALALAVVMPLISVWTTIAALLG 291

Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341
             +       +  + F +        AN+     K+      I +V    G  V  ++ S
Sbjct: 292 GMLAADISMGVTPSYFINSLPRAVDAANLTLATGKSVVFGVLIAMVGCHYGLRVKPNTES 351

Query: 342 LGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           LG+  T  VV SI++VI++D+LFA+ + ++GI
Sbjct: 352 LGQGTTASVVTSITVVILVDALFAVVFKSVGI 383


>gi|77920339|ref|YP_358154.1| ABC transporter permease [Pelobacter carbinolicus DSM 2380]
 gi|77546422|gb|ABA89984.1| ABC-type transport system, permease component [Pelobacter
           carbinolicus DSM 2380]
          Length = 386

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 80/214 (37%), Positives = 128/214 (59%), Gaps = 1/214 (0%)

Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219
           M   GV+ +P+V LISF+ G ++A Q    + QFG EI+  +L ++  LRE+G L+TA++
Sbjct: 174 MEKAGVNSLPIVGLISFLIGLIMAFQATIPMRQFGVEIYVANLTALSMLRELGPLMTALL 233

Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279
           +AGRS SA  AE+G+MKINEEIDA+ TMGL  +  L+  R+ A +I LPLL++ AN   +
Sbjct: 234 LAGRSSSAFAAELGTMKINEEIDALTTMGLAPIPFLVVTRVLATVIILPLLSLFANLMGL 293

Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339
           IG ++V+      P   + ++  +   L ++  GL+K    A  +  V    G      +
Sbjct: 294 IGGAVVLLS-LGYPLVTYTNQVKAAVNLGDLTGGLVKTLVFALIVAGVGCLYGLKTRSGA 352

Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           +++G   T  VV  I ++++ D LFA+ Y+ +GI
Sbjct: 353 SAVGDSATRAVVSGIILIVVADGLFAVVYYFLGI 386


>gi|313109004|ref|ZP_07794978.1| hypothetical protein PA39016_001650017 [Pseudomonas aeruginosa
           39016]
 gi|310881480|gb|EFQ40074.1| hypothetical protein PA39016_001650017 [Pseudomonas aeruginosa
           39016]
          Length = 240

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 92/218 (42%), Positives = 137/218 (62%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           S+I Q+    V  +P+V L+SF+ G V+A  GA  L+ FGA IFS+ L++   +RE GVL
Sbjct: 22  SVIAQIQRSAVDAIPIVALLSFMVGMVVAFLGATVLANFGASIFSVHLVAFSFMREFGVL 81

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           L A++IAGR+ SA  A+IGSMK NEEIDA+R+  LD + +L+ PR+ AL++SLPLLT++ 
Sbjct: 82  LPAILIAGRTASAYTAQIGSMKANEEIDALRSNALDPIELLVLPRVLALLVSLPLLTLVG 141

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
             + I G + V     +IP A F +       + +   G+ K+P  A  I  +   EGF 
Sbjct: 142 ILAGIAGGATVCALSLEIPPAQFLAIVQEKIEVRHFLVGMSKSPLFAVMIAAIGCHEGFK 201

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           V   + S+G   T+ VVQSI +VI+ID++ A+F+  +G
Sbjct: 202 VAGSAESVGDHTTSSVVQSIFMVILIDAIAALFFMEMG 239


>gi|172061853|ref|YP_001809505.1| hypothetical protein BamMC406_2812 [Burkholderia ambifaria MC40-6]
 gi|171994370|gb|ACB65289.1| protein of unknown function DUF140 [Burkholderia ambifaria MC40-6]
          Length = 374

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 179/376 (47%), Gaps = 35/376 (9%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           R  G W +  ++     V   +        +  DLS I  +D +G + +     +  G+ 
Sbjct: 21  RLYGQWTALALARNRGAVARRVAGIASGRVSEWDLSGIERLDHVGGQALW----RVWGRK 76

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
              GV+    Q  ++     R   + + P+R   +     L + +      F        
Sbjct: 77  LPDGVALSTTQR-TIFERIERLDSQREAPERVVHFGPITRLGFML----FAFAEHLQGGI 131

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQ------------MYYVGVSGVPVVILISFV 177
            + GLVI +               LS++R+            +Y  G   +P+  L++F+
Sbjct: 132 AMFGLVILDA--------------LSVLRRPKTMPWKETSANIYSAGAQALPITALVAFL 177

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V++   A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++
Sbjct: 178 IGIVLSYLSAQQLQTFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRV 237

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EE+DA+R MG+     LI PR+ AL +++PLL +  N  A+ G ++       I    F
Sbjct: 238 TEELDAMRVMGIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDINYF 297

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                    +AN++ G+ K       I +VA   GF +  +S SLG+  TT VV SI++V
Sbjct: 298 VRSLPGVVPIANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVV 357

Query: 358 IIIDSLFAIFYFAIGI 373
           I+ D++FAI +  +G+
Sbjct: 358 ILADAVFAIMFQNVGL 373


>gi|121603099|ref|YP_980428.1| hypothetical protein Pnap_0182 [Polaromonas naphthalenivorans CJ2]
 gi|120592068|gb|ABM35507.1| protein of unknown function DUF140 [Polaromonas naphthalenivorans
           CJ2]
          Length = 382

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 176/331 (53%), Gaps = 11/331 (3%)

Query: 43  DLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF 102
            LS + ++D +GA+ +++    +H    LQ        L ++  FT    ++   P R  
Sbjct: 63  SLSPLEKLDYLGAQ-VLWSAWNHHWPAGLQIEPEQRAMLETVEKFT----VRPLPPPRPS 117

Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162
           +          +G++++  ++ +     +LG ++ + G      +  +G    L   +Y 
Sbjct: 118 WLEPV----LMLGERLLSLLSHAKGMLRLLGQLLLDMGRLV--RHPQQGPWRDLSGHLYN 171

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
            G + +P+  L+ F+ G V+A   + QL QFGA+ F ++++ I  +RE+G +L A++IAG
Sbjct: 172 FGATALPITALVGFLIGVVLAYLISQQLRQFGADAFIVNILGISLIRELGPVLAAILIAG 231

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           RSGSAI A+IG M++ EE+DA+R MG+     L+ PR  AL + +PL+++    +A++G 
Sbjct: 232 RSGSAITAQIGVMRVTEELDAMRVMGIARGFRLVMPRAMALALVMPLISVWTTIAALLGG 291

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
            +       +  + FF+   +   ++N+     K+      I ++    G  V  ++ SL
Sbjct: 292 MLAADISMGVTPSFFFNALPAAVKVSNLVLATAKSVVFGLLIALIGCHYGLRVKPNTESL 351

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           G+  T  VV SI++VI++D+LFA+ + ++GI
Sbjct: 352 GQGTTASVVTSITVVILVDALFAVLFKSVGI 382


>gi|148261999|ref|YP_001236126.1| hypothetical protein Acry_3017 [Acidiphilium cryptum JF-5]
 gi|146403680|gb|ABQ32207.1| protein of unknown function DUF140 [Acidiphilium cryptum JF-5]
          Length = 362

 Score =  146 bits (368), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 169/336 (50%), Gaps = 27/336 (8%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
           +DLS    IDT GA L++     + G+ + QG++   E L +        +++   P+  
Sbjct: 48  LDLSRAARIDTSGAALLLALERGHDGETRWQGLTPAAEGLIA--------RLRAALPETG 99

Query: 102 FFYNSFKNLH-----YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156
                 + +        +G +I  F  ++         +++ TG      +   G   + 
Sbjct: 100 APPPPPRTVRGPGPLRTLGVRI-AFFGET---------ILATTGLPARRRFLRGG---NF 146

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
            R     G   +P+VI++ F+ G ++A Q A  + QFGA+I+   L+S+   RE+G LL 
Sbjct: 147 FRIAERAGAQALPLVIMLGFLIGMILAFQSAIPMRQFGADIYVAALVSLSLFRELGPLLA 206

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV++AGR+GSA  AE+G+M +NEE+ A+ TMG+D   +L+ PR+ A ++ +P L +  + 
Sbjct: 207 AVILAGRTGSAFAAELGTMMVNEEVAALTTMGIDPGTMLVIPRMAAAMLVMPALALGIDV 266

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           S ++G   V+      P +   ++     +  ++  GL+K+     A+G++  + G   G
Sbjct: 267 SGVLGMGFVM-GILGFPPSAIVAQMQMATSPHDVLLGLMKSVVFGAAVGLIGCRAGLTAG 325

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
               ++G+  T+ VV  I   I++D LFA+  + +G
Sbjct: 326 GGPRAVGEAATSAVVGGIVATILLDGLFAVILYRLG 361


>gi|94309017|ref|YP_582227.1| hypothetical protein Rmet_0072 [Cupriavidus metallidurans CH34]
 gi|93352869|gb|ABF06958.1| ABC transporter, inner membrane subunit [Cupriavidus metallidurans
           CH34]
          Length = 376

 Score =  146 bits (368), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 172/332 (51%), Gaps = 15/332 (4%)

Query: 44  LSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQ--LFSLISFTHRKKIKNQKPQRS 101
           L  IT +D IGA+LI    + ++G +    VS +  Q  +F+ I+    +  K    +R 
Sbjct: 58  LDGITRLDHIGAQLIW---QAWNGHMP-DNVSLNDGQKRVFARIAGLRTEGWKKHMVER- 112

Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY 161
             +N        +G  ++ F+        +LG ++ +   F  +  +  G    +   +Y
Sbjct: 113 --FNPVTI----VGASVLSFLAQLGVGVTMLGQLVFDLLRFLRAPQR--GPWREISANIY 164

Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221
            VG   + +  L++F+ G V++   A QL  FGA  F ++++ +  +RE+G +L A++IA
Sbjct: 165 NVGYKALGITALVAFLIGIVLSYLSANQLRIFGASTFIVNILGMAVIRELGPVLAAILIA 224

Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281
           GRSGSAI A+IG M++ EE+DA+  MG+     L+ PR+ AL IS+PLL    +  A+ G
Sbjct: 225 GRSGSAITAQIGVMRVTEELDAMSVMGISHGFRLVMPRVIALAISMPLLVAWTDLLALFG 284

Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341
             +      DI +  F  +      +AN++ GL K       I + A   G  V  ++ S
Sbjct: 285 GMVAARLQLDISYVYFLRQLPDAVPVANLWFGLCKGVVFGMLIALTACHFGLRVKPNTQS 344

Query: 342 LGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           LG+  T  VV SI++VII D++FAI +  IGI
Sbjct: 345 LGQGTTASVVTSITVVIIADAVFAILFKDIGI 376


>gi|323700846|ref|ZP_08112758.1| protein of unknown function DUF140 [Desulfovibrio sp. ND132]
 gi|323460778|gb|EGB16643.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans
           ND132]
          Length = 381

 Score =  146 bits (368), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 176/337 (52%), Gaps = 19/337 (5%)

Query: 43  DLSAITEIDTIGAELIMYFME---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
           D   +T +D  G  L++   E   +    I+L  +     +L  L   T   K ++ + +
Sbjct: 58  DCGGVTYMDGSGVALLLKLKELCAEKKAAIELTNLREEDSRLVDLTWDTALPKQRDSERE 117

Query: 100 RSFFYNSFKNLH---YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156
           R     +        +H  ++++ F+ +S S   +LG    + G       ++K  +L+ 
Sbjct: 118 RRGLAEAVGAAGGELWHNVREMIAFVGESFS---LLGRAAVHPG-----MVRWKDVVLAC 169

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I     VGV  + +++LI F+ G +++ Q A  L +FG EIF  +++ ++  RE+G L+T
Sbjct: 170 IN----VGVESMFIIVLIGFLMGLIMSFQSAISLQRFGGEIFVPNMLGLVMFREMGPLVT 225

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           ++++A RSGSA  AEIG+MKINEE+DA+ TMGL  +R L+ P++ A +  +PL+T+  N 
Sbjct: 226 SILLAARSGSAFAAEIGTMKINEELDALTTMGLSPMRFLVVPKLLATMAMVPLMTMFFNL 285

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           ++++G ++V+      P   F SR  +  +  + + G+ K    +  +  V    G    
Sbjct: 286 ASLVGGALVMLS-MGYPLVTFTSRVFANVSATDFWGGMAKGLVFSFLVAGVGCLRGMQTR 344

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
             ++++G   T+ VV  I ++   D LFA+ Y+ +GI
Sbjct: 345 SGASAVGLSTTSAVVSGIILIAFADGLFAVAYYYLGI 381


>gi|115353001|ref|YP_774840.1| hypothetical protein Bamb_2950 [Burkholderia ambifaria AMMD]
 gi|115282989|gb|ABI88506.1| protein of unknown function DUF140 [Burkholderia ambifaria AMMD]
          Length = 374

 Score =  145 bits (367), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 179/376 (47%), Gaps = 35/376 (9%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           R  G W +  ++     V   +        +  DLS I  +D +G + +     +  G+ 
Sbjct: 21  RLYGQWTALALARNRGAVARRVAGIASGRVSEWDLSGIERLDHVGGQALW----RVWGRK 76

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
              GV+    Q  ++     R   + + P+R   +     L + +      F        
Sbjct: 77  LPDGVALSPTQR-TIFERIERLDSQREAPERVVHFGPITRLGFML----FAFAEHLQGGI 131

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQ------------MYYVGVSGVPVVILISFV 177
            + GLVI +               LS++R+            +Y  G   +P+  L++F+
Sbjct: 132 AMFGLVILDA--------------LSVLRRPKTMPWKETSANIYSAGAQALPITALVAFL 177

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V++   A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++
Sbjct: 178 IGIVLSYLSAQQLQTFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRV 237

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EE+DA+R MG+     LI PR+ AL +++PLL +  N  A+ G ++       I    F
Sbjct: 238 TEELDAMRVMGIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDINYF 297

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                    +AN++ G+ K       I +VA   GF +  +S SLG+  TT VV SI++V
Sbjct: 298 VRSLPGVVPIANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVV 357

Query: 358 IIIDSLFAIFYFAIGI 373
           I+ D++FAI +  +G+
Sbjct: 358 ILADAVFAIMFQNVGL 373


>gi|238028752|ref|YP_002912983.1| hypothetical protein bglu_1g32160 [Burkholderia glumae BGR1]
 gi|237877946|gb|ACR30279.1| Hypothetical protein bglu_1g32160 [Burkholderia glumae BGR1]
          Length = 390

 Score =  145 bits (367), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 167/333 (50%), Gaps = 15/333 (4%)

Query: 43  DLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQ--LFSLISFTHRKKIKNQKPQR 100
           DLSAI  +D +G + +     +  G     GV     Q  +F  I    R     + P+ 
Sbjct: 70  DLSAIERLDHVGGQALW----RVWGHRLPDGVVLTDNQRIVFERI---ERLDEAREAPEP 122

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
              ++    L    G  + +F         + G VI + G             +S    +
Sbjct: 123 VVRHDPVTRL----GLAMFQFGEHLFGGVAMFGRVILDLGAIARRPKTMPWTEISA--NV 176

Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
           Y  G   +P+  L++F+ G V++   A QL QFGA  + ++++ +  +RE+G +L+A+++
Sbjct: 177 YNAGAKALPITALVAFLIGIVLSYLSAQQLQQFGANRYIVNILGLSVIRELGPVLSAILV 236

Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280
           AGRSGSAI A+IG M++ EE+DA+R MG+     ++ PR+ AL +++PLL +  N  A+ 
Sbjct: 237 AGRSGSAITAQIGVMRVTEELDAMRVMGIPHGLRIVLPRVLALGVAMPLLVMWTNIVALS 296

Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
           G ++       I F  F         +AN++ GL K       I +V    GF +  +S 
Sbjct: 297 GGALAAKFALGIDFNFFMRSLPGVVPIANLWIGLGKGVVFGMLIALVGCHFGFRIKANSQ 356

Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           SLG+  TT VV SI++VI+ D++FAI +  +G+
Sbjct: 357 SLGEGTTTSVVSSITVVILADAVFAILFQNVGL 389


>gi|301062341|ref|ZP_07203004.1| conserved hypothetical protein [delta proteobacterium NaphS2]
 gi|300443545|gb|EFK07647.1| conserved hypothetical protein [delta proteobacterium NaphS2]
          Length = 390

 Score =  145 bits (367), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 191/384 (49%), Gaps = 28/384 (7%)

Query: 1   MSENGITVFRFAGNW----KSPEISEIADDVVMAINKSIQSDSAI----VDLSAITEIDT 52
           +SE      +F G+W    K P IS        A+ K + S++A+     D   ++  D+
Sbjct: 24  LSEQKTLQIKFQGDWILENKRPSIS--------ALIKQMDSEAAVRQITFDTLGLSRWDS 75

Query: 53  IGAELIMYFMEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
                +   +EK   K   +  +G+     +L  L S    KK  ++K  R  F      
Sbjct: 76  ALLICLTKIIEKASQKDIPLDGKGLPEGAFKLLDLASTVPEKKGVHKKNGRPSFL----- 130

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
             + +G + V F N        +G   +   +F     +F+     L+R +   G+  +P
Sbjct: 131 --FQVGSESVAFFNSFLEALGFVGEAFNAFSKFLTGKARFRRS--DLMRIIQDCGIEALP 186

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +V LIS + G ++A  GA QL+ FGA+I+  +L+ I  +R +G ++  +++AGR+G+A  
Sbjct: 187 IVSLISLLVGLILAFVGAVQLTMFGAQIYVANLVGIAMVRVMGAVMAGIIMAGRTGAAFA 246

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A++G+M++NEEIDA +TMG+  +  L+ PR+ AL + +PLL + A+   I+G  IV    
Sbjct: 247 AQLGTMQVNEEIDAFKTMGISPMEFLVLPRMLALTLMMPLLCLYADLMGILGGFIVGVGM 306

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            D+    ++++  +  TL++++ G++++      + +     G   G  ++++G   T+ 
Sbjct: 307 LDLNMMEYYNQTKAAVTLSDLWIGIVQSAVFGMLVALAGCLRGMQCGRSASAVGDATTSA 366

Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373
           VV  I  +I+  ++  +    +GI
Sbjct: 367 VVTGIVSIIVATAVITVITNMMGI 390


>gi|119897982|ref|YP_933195.1| hypothetical protein azo1691 [Azoarcus sp. BH72]
 gi|119670395|emb|CAL94308.1| conserved hypothetical membrane protein [Azoarcus sp. BH72]
          Length = 365

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 78/215 (36%), Positives = 125/215 (58%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
            +Y V V  +PV  L+ F+ G V++   A QL  FGA+IF ++++ +  +RE+G +L +V
Sbjct: 149 NLYKVAVRAMPVTALVGFLIGVVLSYLSALQLRAFGADIFIVNILGLGIIRELGPVLVSV 208

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++AGRSGSA+ A++G M++ EEIDA+  MG+     L+ P++ AL +++PLL +  +  A
Sbjct: 209 LVAGRSGSAMTAQLGVMRVTEEIDALAAMGISASLRLVLPKVLALTLAMPLLVLWTSAVA 268

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           + G  +  W    + F  F         LAN+F GL K       I +VA   G  V  +
Sbjct: 269 LFGGMVSAWMELGMSFGFFLETLPRVVPLANVFVGLTKGLVFGLLISLVACHFGLRVKPN 328

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           + SL    T  VV +I++VI++D+LFAI    IG+
Sbjct: 329 TESLSANTTASVVTAITVVILVDALFAIATRRIGV 363


>gi|297538919|ref|YP_003674688.1| hypothetical protein M301_1733 [Methylotenera sp. 301]
 gi|297258266|gb|ADI30111.1| protein of unknown function DUF140 [Methylotenera sp. 301]
          Length = 378

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 118/384 (30%), Positives = 193/384 (50%), Gaps = 39/384 (10%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S N +     +G W +  +  I + +  AI  +I+ +  + D S +  +D  GA    + 
Sbjct: 12  SMNALPNLTLSGAWVASTLHNIVEKI-HAIPTTIELN-IVADGSGVEALDMSGA----WV 65

Query: 62  MEKYHGKIKLQGVS--------THIEQLFSLI-SFTHRKKIKNQ---KPQRSFFYNSFKN 109
           M+     +K QG S          +E+L  +   F+H    +N    KP           
Sbjct: 66  MQSLFSLLKAQGNSITLIGFKPEFVERLKVVTYEFSHHANPQNNIEIKP---------PT 116

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCAS-----SYKFKGFLLSLIRQMYYVG 164
           L  HIG    + + ++      +G V S    F AS       +++  L + IR+    G
Sbjct: 117 LLEHIGMATTEALKEAKDLLSFVGEVSS---VFLASFADPQRIRWRPILFN-IRE---AG 169

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
           ++ VP+V +++F+ G V+A Q A QL  +GA IF +DL+ I  LRE   L+ A++IAGRS
Sbjct: 170 LNAVPIVGILAFLLGVVVAYQSADQLRHYGANIFVVDLIGISMLREFAPLIAAIIIAGRS 229

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           GSA  A+IG+M + EEIDA+R +G+  + +L+ P++  L ISLPLLT+ A+   I G  +
Sbjct: 230 GSAYAAQIGTMSVTEEIDAMRILGIAPMEMLVLPKLIGLAISLPLLTVWADMLGIFGGML 289

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
                 D+ F  F  R      +     GL KA   A  I ++   +GF     ++++G+
Sbjct: 290 TASAQLDVSFVDFVGRLVKAVEMTTYTVGLGKAFVFAIIITMIGCFQGFRTKGGADNVGR 349

Query: 345 KVTTCVVQSISIVIIIDSLFAIFY 368
           + T  VVQSI +VI+ D+LF++ +
Sbjct: 350 QTTRSVVQSIFLVIVADALFSVLF 373


>gi|182416429|ref|YP_001821495.1| hypothetical protein Oter_4625 [Opitutus terrae PB90-1]
 gi|177843643|gb|ACB77895.1| protein of unknown function DUF140 [Opitutus terrae PB90-1]
          Length = 376

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 158/302 (52%), Gaps = 15/302 (4%)

Query: 74  VSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN--DSCSQAHI 131
           +   ++ L + ++ +H   + + +     F     N    + +K   F+     C    +
Sbjct: 88  LPPRVQTLLTQLASSHATSVPHDRSVN--FLAVVGNATMELSRKTQDFVQFFGEC----V 141

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG V     +      KF+      + +M   G   +P+V LI+F+ G  +A  GA  L 
Sbjct: 142 LGAV-----KLLKRPDKFR--WRDCLEEMQQCGAMALPIVSLIAFLVGVTLAYIGALVLR 194

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           Q+G +I+  DL+ +  +RE+G ++TAV++AGR+G+A  A++G+MK NEEIDA+ T+G+  
Sbjct: 195 QYGGDIYVADLIGMAMVREMGAVMTAVVLAGRTGAAFAAQLGNMKANEEIDALETLGISP 254

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V+ L+ PR+ AL + +PLL + AN   I+G   V     DI  + ++    +  TL ++ 
Sbjct: 255 VQFLVMPRLLALGVMMPLLALYANALGILGGMAVSAGVLDISPSAYWVEMGTIVTLRDVA 314

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           +G IKA      +G+     G      +  +G+  T+ VV SI ++++ D++FA+ +  I
Sbjct: 315 SGFIKAIAFGGIVGLSGCLRGLQAERSAAGVGRAATSAVVTSILLLVVADAIFAVLFNVI 374

Query: 372 GI 373
           G+
Sbjct: 375 GL 376


>gi|218961389|ref|YP_001741164.1| transporter, putative (modular protein) [Candidatus Cloacamonas
           acidaminovorans]
 gi|167730046|emb|CAO80958.1| transporter, putative (modular protein) [Candidatus Cloacamonas
           acidaminovorans]
          Length = 358

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 179/353 (50%), Gaps = 16/353 (4%)

Query: 21  SEIADDVVMAINKSIQSDSA-IVDLSAITEIDTIGAELIMYFMEKY--HGKIKLQGVSTH 77
           +E   +  + +N  ++  S   +DLS I  +D+ G   +     +    G +  QG +  
Sbjct: 18  AETVPETFIEVNSLLKHQSPNTIDLSNINVLDSAGVAFLDELNTRLSAEGILLFQGATPE 77

Query: 78  IEQLFSLISFTHRKKIKNQKPQRSF-FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVI 136
           I+++    SF+  K IK   P+R   F+    +     G+    F N     + +    +
Sbjct: 78  IQEVID--SFSSLK-IKVPAPERKMGFFEKIGDSLVLAGQN---FYNVMLLASEVFYWAV 131

Query: 137 SNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE 196
              G F     +   F +    Q   +G   +P++ L+SF+ G +++ Q + QL+ FGA 
Sbjct: 132 --IGIFSRKGQRKGSFTI----QCSLLGSQALPILSLLSFIVGFILSLQASVQLANFGAN 185

Query: 197 IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILI 256
           +F  DLM+   +REI  L+TA+++AGRSGSAI +EI +M++ EEIDA++TM L  VR ++
Sbjct: 186 VFIADLMAFAMVREIAPLITAIIVAGRSGSAIASEIATMQVTEEIDALKTMALSPVRYVV 245

Query: 257 SPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316
            P+  A+ + +P+L + +   + IG  ++   Y D+    F  R  +  TL ++ T   K
Sbjct: 246 VPKFHAITVVMPILVMFSILVSEIGGGLIAIDYLDLSVYTFVQRSINVLTLKDLVTSFGK 305

Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           +   A  I I+    GF V   +  +GK  T+ VV SI  VII D++F++ Y 
Sbjct: 306 SVIFAWTIVIIGAYCGFQVKGGAEGVGKATTSSVVASIFAVIIWDAIFSLLYL 358


>gi|224437093|ref|ZP_03658074.1| hypothetical protein HcinC1_03955 [Helicobacter cinaedi CCUG 18818]
 gi|313143563|ref|ZP_07805756.1| ABC transport system permease [Helicobacter cinaedi CCUG 18818]
 gi|313128594|gb|EFR46211.1| ABC transport system permease [Helicobacter cinaedi CCUG 18818]
          Length = 367

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 176/341 (51%), Gaps = 17/341 (4%)

Query: 31  INKSIQSDSAI-VDLSAITEIDTIGAELIMYFMEKYHGK-IKLQGVSTHIEQLFSLISFT 88
           ++K I ++  I +D   IT++D +    I   +E   GK  ++    + ++++F  +  +
Sbjct: 32  LSKLISANERITLDFLEITKVDFVFCAFIYGLLE---GKDYEILNADSQVKEIFQSMVES 88

Query: 89  HRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYK 148
             K   ++    S FY +     +  GK   +    S    +  G+    +  F  S + 
Sbjct: 89  LPKLENSKSKSHSMFYGAL----FDFGKFCERSYQSSLDFLNFFGMC---SFYFFRSCWN 141

Query: 149 FKGFLLSLIRQMYYVGVSG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
            + F L  I  MY++  SG   +PV +L +F+    IA QG  QL + G  + S+++++ 
Sbjct: 142 LRHFKLGSI--MYHINESGFKALPVALLTAFIVSYAIALQGVLQLEKMGVPLMSVEIVAK 199

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
           L LRE+G  + A++IAGRS S+  A+IG M + EE DA++TM L     +I PRI AL+I
Sbjct: 200 LSLREMGPFILAIVIAGRSSSSFAAQIGVMNLTEENDALKTMNLSLFDYIILPRILALVI 259

Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325
            +PLL  LA+  ++    + I     + F  +  RF+    + N + G+IKAPF   A+ 
Sbjct: 260 IMPLLVFLADAVSLFACFLAINMQTGLDFMQYLERFYEYVGINNFWVGVIKAPFFGAAVA 319

Query: 326 IVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           +V    G  V   + S+G + T  VV +I  VI+I+++F+I
Sbjct: 320 LVGCFRGLYVKGDTESVGIETTKSVVNAIFWVILINAIFSI 360


>gi|328954405|ref|YP_004371739.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM
           11109]
 gi|328454729|gb|AEB10558.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM
           11109]
          Length = 418

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 177/340 (52%), Gaps = 23/340 (6%)

Query: 36  QSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK---IKLQGVSTHIEQLFSLI---SFTH 89
           Q  S  +DL  +  +D+ GA  ++   EK   +     L  +S  I+++  LI   + TH
Sbjct: 88  QLSSVGLDLGGLEYLDSAGALAVLQLAEKLKSQGIICTLDNISPKIKKILDLIDIQALTH 147

Query: 90  RKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKF 149
              I   K    F + S       +G+  + F  D        G ++ +    C    + 
Sbjct: 148 PPLITVGK---RFGWIS------QVGEASLAFWRDIIEVIAFFGELLLDLASVCLRPRRV 198

Query: 150 KGFLLSLIRQMYYV---GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206
           +   +     M+Y+   GV G+P+V LI  + G +IA   + QL QFGA I+   L+ + 
Sbjct: 199 RWEYV-----MFYMKRAGVDGLPIVSLIGLLLGLIIAFMSSLQLQQFGANIYVASLLGVA 253

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            +RE+G ++TA+++AGRSGSA  AEIGSMK++EE+DA+  MG + +R+L +P++ A ++ 
Sbjct: 254 MVRELGPIMTAILVAGRSGSAFAAEIGSMKVSEEVDALTVMGFNPMRMLTTPKVIASLVV 313

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326
           +PLLTI A+   IIG  IV     D+    +        TL +  +  IK+   A  I  
Sbjct: 314 VPLLTIYADLLGIIGGLIVGVTMLDLTVYSYIQETRRILTLFDFTSSFIKSVVFAFLIAA 373

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           +  + GF V   ++++G   T+ VV +I ++I++DS+FAI
Sbjct: 374 IGCQRGFQVRGGASAVGSATTSAVVAAIFLIIVVDSIFAI 413


>gi|317153918|ref|YP_004121966.1| hypothetical protein Daes_2214 [Desulfovibrio aespoeensis Aspo-2]
 gi|316944169|gb|ADU63220.1| protein of unknown function DUF140 [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 431

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 184/376 (48%), Gaps = 37/376 (9%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFME---K 64
           F   G   +P  + + D+       S  S  A+  D S I  +D  G  L++   E   +
Sbjct: 75  FEIRGRLDAPGTAHVWDEASRV--ASAGSGGAVEADCSGIEYMDGSGMALLLKLREVVAE 132

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK-------- 116
             G + L  ++    QL   I  T  + +    P  S      + L   +G+        
Sbjct: 133 AGGTLSLVNLAPRHRQL---IDLTGDRPLPGWNPADS----ERRGLAERVGRATRDALTG 185

Query: 117 --KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
             ++V+F+ ++         VI        S  ++K  LLS +    +VGV  + ++ L+
Sbjct: 186 IREMVEFVGEAS--------VIITRSLLHPSRVRWKDVLLSCV----HVGVDSLFIISLL 233

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
            F+ G +++ Q A  L +FG EIF  +++ ++  RE+G L+TA+++A RSGSA  AEIG+
Sbjct: 234 GFLMGLIMSFQSAISLQRFGGEIFVPNMLGLVMFREMGPLVTAILLAARSGSAFAAEIGT 293

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           MKINEE+DA+ TMGL  +R L+ P++ + +  +PL+T+  N ++++G ++V+      P 
Sbjct: 294 MKINEELDALTTMGLSPMRFLVVPKLLSALAMVPLMTLFFNLASLVGGALVMLS-LGFPL 352

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
             F SR  S    ++ F G+ KA   +  +  V    G      ++++G   T+ VV  I
Sbjct: 353 VTFTSRVFSYVHYSDFFGGMAKALVFSILVAGVGCLRGMQTRSGASAVGLSTTSAVVTGI 412

Query: 355 SIVIIIDSLFAI-FYF 369
             +   D LFA+ FY+
Sbjct: 413 IFIAFADGLFAVAFYY 428


>gi|120609009|ref|YP_968687.1| hypothetical protein Aave_0306 [Acidovorax citrulli AAC00-1]
 gi|120587473|gb|ABM30913.1| protein of unknown function DUF140 [Acidovorax citrulli AAC00-1]
          Length = 375

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 172/332 (51%), Gaps = 12/332 (3%)

Query: 43  DLSAITEIDTIGAELIM-YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
           DL ++  +D +GA+L+  ++   +  +I L       + L  +  FT    + ++ P   
Sbjct: 55  DLRSVDWLDHVGAQLLWNHWGRVWPERIALD--DAQRDMLDRVAEFT----VIDRPPVPP 108

Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY 161
           +      +    +G K++  +        ++G ++ + G    +  +     +S    +Y
Sbjct: 109 WRLVEEVD---RLGVKVLHALGHGRHLLELVGQLVIDLGSALRAPRRAPWRDVS--GHLY 163

Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221
            +G + +P+  ++ F+ G V+A   + QL QFGAE F ++++ I  +RE+G +L A+++A
Sbjct: 164 RMGATALPITAIVGFLIGVVLAYLMSLQLRQFGAESFIVNILGISLIRELGPMLAAILVA 223

Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281
           GRSGSAI A+IG M++ EE+DA+R MG+     L+ PR  AL I++PL+ +     A+ G
Sbjct: 224 GRSGSAITAQIGVMRVTEELDAMRVMGIPHGFRLVMPRAVALAIAMPLIAVWTTLCALAG 283

Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341
             +      D+  A F     +    +N+   + K+      I ++    G  V  ++ S
Sbjct: 284 GMLAADIAMDVSPAYFVQALPNAVGFSNLVLAMAKSVVFGVGIALIGCHWGLRVKPNTQS 343

Query: 342 LGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           LG+  T  VV +I++VII+D+LFAI +  +GI
Sbjct: 344 LGEGTTASVVNAITMVIIVDALFAIAFKNLGI 375


>gi|171322064|ref|ZP_02910936.1| protein of unknown function DUF140 [Burkholderia ambifaria MEX-5]
 gi|171092626|gb|EDT37930.1| protein of unknown function DUF140 [Burkholderia ambifaria MEX-5]
          Length = 427

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 178/374 (47%), Gaps = 31/374 (8%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           R  G W +  ++     V   +        +  DLS I  +D +G + +     +  G+ 
Sbjct: 74  RLYGQWTALALARNRGAVARRVAGIATGRVSEWDLSGIERLDHVGGQALW----RVWGRK 129

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHY-------HIGKKIVKF- 121
              GV+    Q  ++     R   + + P+R   +       +       H+   I  F 
Sbjct: 130 LPDGVALSPTQR-TIFERIERLDSQREAPERVVHFGPITRFGFMLFAFAEHLQGGIAMFG 188

Query: 122 --INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
             I D+ S      L   NT  +  +S             +Y  G   +P+  L++F+ G
Sbjct: 189 LVILDALSV-----LRRPNTMPWKETSAN-----------IYSAGAQALPITALVAFLIG 232

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V++   A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ E
Sbjct: 233 IVLSYLSAQQLQTFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTE 292

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DA+R MG+     LI PR+ AL +++PLL +  N  A+ G ++       I    F  
Sbjct: 293 ELDAMRVMGIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDINYFVR 352

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                  +AN++ G+ K       I +VA   GF +  +S SLG+  TT VV SI++VI+
Sbjct: 353 SLPGVVPIANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVIL 412

Query: 360 IDSLFAIFYFAIGI 373
            D++FAI +  +G+
Sbjct: 413 ADAVFAILFQNVGL 426


>gi|32266623|ref|NP_860655.1| hypothetical protein HH1124 [Helicobacter hepaticus ATCC 51449]
 gi|32262674|gb|AAP77721.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
          Length = 348

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 154/297 (51%), Gaps = 8/297 (2%)

Query: 73  GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHY---HIGKKIVKFINDSCSQA 129
           G +T   ++F  +S +  K+ +      +F   S K  H     +GK+I +F     +  
Sbjct: 50  GTNTRTNEIFQTLSSSLPKENEENAINNAF---SLKISHMVLIPLGKRIEQFFESFLNFL 106

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
           +  G+ +        S  +FK    S+   M   G   +PV +L +F+    IA QG  Q
Sbjct: 107 NFCGMCLWYFFLSLLSPRRFKCG--SIFYHMNEAGFKALPVALLTAFIVSYAIALQGVLQ 164

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L + G  + S+++++ L LRE+G  + A++IAGRS SA  A++G M + EE DA++TM L
Sbjct: 165 LEKMGVPLMSVEIVAKLSLRELGPFILAIVIAGRSSSAFSAQLGVMNLTEENDALKTMNL 224

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
                LI PR+ ALII +PLL  LA+  ++  A + +     I F  +  RF+    + +
Sbjct: 225 SLFDYLILPRVLALIIVMPLLVFLADSVSLFAAMLAVKMQTGINFMQYLERFYEYVGINH 284

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
              G+IKAPF   AI +V    G  V   + S+G + T  VV ++  VI+I+++F++
Sbjct: 285 FLVGMIKAPFFGAAIALVGCFRGLYVKGDTESIGLETTKSVVNALFWVILINAIFSV 341


>gi|326315184|ref|YP_004232856.1| hypothetical protein Acav_0366 [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323372020|gb|ADX44289.1| protein of unknown function DUF140 [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 375

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 171/337 (50%), Gaps = 22/337 (6%)

Query: 43  DLSAITEIDTIGAELIM-YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
           DL  +  +D +GA+L+  ++  ++  ++ + G    + +  +  + T R     + P R 
Sbjct: 55  DLRGVEWLDHVGAQLLWNHWGREWPERLSVDGAQRDMLERVAEYTVTRRPP---ESPWR- 110

Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKF-----KGFLLSL 156
                   L   + +  VK ++      H+L LV    G+      +      +     +
Sbjct: 111 --------LAEEVDRLGVKVLSALGHGRHLLELV----GQLMIDLVRVVRAPRRAPWRDI 158

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
              +Y +G + +P+  ++ F+ G V+A   + QL QFGAE F ++++ I  +RE+G +L 
Sbjct: 159 SGHLYRMGATALPITAIVGFLIGVVLAYLMSLQLRQFGAESFIVNILGISLIRELGPMLA 218

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A+++AGRSGSAI A+IG M++ EE+DA+R MG+     L+ PR  AL I++PL+ +    
Sbjct: 219 AILVAGRSGSAITAQIGVMRVTEELDAMRVMGIPHGFRLVMPRAVALAIAMPLIAVWTTL 278

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            A+ G  +      ++  A F     +    +N+   + K+      I ++    G  V 
Sbjct: 279 CALAGGMLAADIAMNVSPAYFVQALPNAVGFSNLVLAMGKSVVFGVGIALIGCHWGLRVK 338

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
            ++ SLG+  T  VV +I++VII+D+LFAI +  +GI
Sbjct: 339 PNTQSLGEGTTASVVNAITMVIIVDALFAIAFKNLGI 375


>gi|254496222|ref|ZP_05109116.1| ABC transporter, permease [Legionella drancourtii LLAP12]
 gi|254354527|gb|EET13168.1| ABC transporter, permease [Legionella drancourtii LLAP12]
          Length = 375

 Score =  143 bits (360), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 183/370 (49%), Gaps = 26/370 (7%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEKY 65
           F   G W   ++  +   +  +     Q     V+   I+ +D+ GA  ++     +++ 
Sbjct: 17  FNCTGRWSVMDVGSLLKKITASTLPKTQKIK--VNGEGISHLDSAGALALIKCVNALKQR 74

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
             ++ L G S   +QL  LI    +  +  Q P         +N  Y +GK+        
Sbjct: 75  DNEVALVGFSKIQQQLLDLIQ-EKQGILDYQIPSPPK-----ENFLYKLGKE------SE 122

Query: 126 CSQAHILGLVISNTGEFCASSY----KFKGFLL-SLIRQMYYVGVSGVPVVILISFVTGA 180
              A + GL+I   G+     +     ++ F   S++  +   G+  +P++ L+SF+ G 
Sbjct: 123 TKLAQVDGLIIL-IGDLATKLFDAFGNWRRFQWPSIMSNIDATGIKALPILALLSFLIGV 181

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A Q   QL+ +GA  F   L  +   RE   L+TA+++AGR+ SA  A++GSMK+NEE
Sbjct: 182 VLAYQMGLQLTTYGANSFIAYLSGMAIFREFAPLITAIIVAGRTSSAYTAQLGSMKVNEE 241

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+ TMGL    +L+ P++  L+I+ PLL   A+  +I+G+ I+      I F  F  R
Sbjct: 242 IDALLTMGLSPTELLVLPKVLGLLIAFPLLIFWADIFSILGSMIMANNMLGIGFLDFLQR 301

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV--GVHSNSLGKKVTTCVVQSISIVI 358
              +  ++    GL KAP  A  I +V   +GF V  G   N +G + T  VVQS+ ++I
Sbjct: 302 LRDSVGISQFKLGLYKAPAFALLIALVGCFQGFRVEAGTEKN-IGSQTTKSVVQSLFLII 360

Query: 359 IIDSLFAIFY 368
           I D++++I Y
Sbjct: 361 IADAIYSIIY 370


>gi|315927603|gb|EFV06934.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 194

 Score =  142 bits (359), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 81/193 (41%), Positives = 117/193 (60%)

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A Q A+QL+QFGA IF +DLM I   RE+  L+ A++IAGRS S+  A+IG MKI +E
Sbjct: 2   VLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDE 61

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           I A+ TMG      ++ PR+ AL++++PL+  +++  +IIG  +V     DI FA F  R
Sbjct: 62  IAAMNTMGFRSFEFIVIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRR 121

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
           F     + +IF GL KAP     IG++A   GF V   + S+G   T  VV +I  VI  
Sbjct: 122 FREAVDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAF 181

Query: 361 DSLFAIFYFAIGI 373
           D+LF++   + GI
Sbjct: 182 DALFSVILTSTGI 194


>gi|225165545|ref|ZP_03727365.1| protein of unknown function DUF140 [Opitutaceae bacterium TAV2]
 gi|224800218|gb|EEG18628.1| protein of unknown function DUF140 [Opitutaceae bacterium TAV2]
          Length = 371

 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 143/263 (54%), Gaps = 2/263 (0%)

Query: 99  QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158
           Q    ++   NL   IG+  ++ ++ +      LG  + +         KF+    S   
Sbjct: 111 QAEPAHDRRTNLLTSIGEATIETVDRATGIMSFLGECLLSFFHLARRPRKFRWGDCS--E 168

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           +M   G   +P+V LISF+ G ++A Q A  + QFGA+I+  D ++++  RE+G ++T +
Sbjct: 169 EMQQCGAMALPIVGLISFLVGVIMAYQSAVLMRQFGADIYVADAVALVMAREMGAMMTGI 228

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++AGR+G+A  A IG+MK NEEIDA+ T G+  V  L+ PR+ AL + +PLLT+ AN   
Sbjct: 229 ILAGRTGAAFAATIGNMKANEEIDALSTFGIRPVDFLVLPRLVALALMMPLLTLYANALG 288

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           I+G   V     DIP   ++++  +   L++I TGLIKA      +G+     G      
Sbjct: 289 IVGGMGVAMGVLDIPPITYWNQTVNALDLSDISTGLIKASCFGILVGLSGCHRGMNADRS 348

Query: 339 SNSLGKKVTTCVVQSISIVIIID 361
           ++ +G+  T+ VV  + ++II D
Sbjct: 349 ASGVGRAATSAVVIGMLLIIIAD 371


>gi|308272474|emb|CBX29078.1| hypothetical protein N47_J00590 [uncultured Desulfobacterium sp.]
          Length = 381

 Score =  142 bits (358), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 87/210 (41%), Positives = 126/210 (60%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I  M   GV+ +P++ LISF+ G VIA   + QL QFGA ++   L+SI  + E+G ++T
Sbjct: 166 ILHMEKTGVNALPIIALISFLLGLVIAFMSSLQLEQFGANLYVASLVSIGMVSELGPIMT 225

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++IAGRSGSA  AEIG+MKI+EE DA+  MG D    L  PRI A II +PLLT+ A+ 
Sbjct: 226 AIVIAGRSGSAFAAEIGTMKISEETDALFVMGFDPTLFLAVPRILASIIVVPLLTLFADI 285

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            AI G  +V     D+  + + ++  +   L  I  G+ K+   A  I  V    GF   
Sbjct: 286 FAIAGGLVVGVFILDLTTSSYLTQTMNVLNLFEICWGISKSIVFAVIISWVGCLRGFQTK 345

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
             ++++G   T+ VV SI ++I+IDS+FAI
Sbjct: 346 GGADAVGNAATSAVVSSIFLIILIDSMFAI 375


>gi|217970678|ref|YP_002355912.1| hypothetical protein Tmz1t_2277 [Thauera sp. MZ1T]
 gi|217508005|gb|ACK55016.1| protein of unknown function DUF140 [Thauera sp. MZ1T]
          Length = 371

 Score =  142 bits (358), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 180/365 (49%), Gaps = 14/365 (3%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           R AG+W    + E    +  A+  ++  D A   L A+  +D+ GA   +   + + G+ 
Sbjct: 18  RLAGDWTLRGLDECLPTLRRAL-ATVPPD-ARWSLRAVRRMDSFGA---LLLWQAWGGRW 72

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKN-QKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
                +   ++  ++I        +   +P R+   ++   L    GK +  F       
Sbjct: 73  PAALEADDAQR--AIIGRIENASARALPEPPRASALDAVALL----GKGLFAFAGHLSGF 126

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             +LG ++ + G        +   LL +   ++ VGV  +PV  L+ F+ G V++   A 
Sbjct: 127 VALLGRLVLDLGHLLHHPRDWP--LLEISANLHKVGVKAMPVSALVGFLIGVVLSYLSAL 184

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           QL  FGA+ F ++++ +  +RE+G +L +V++AGRSGSA+ A++G M++ EEIDA+  MG
Sbjct: 185 QLRTFGADAFIVNILGMGIIRELGPVLVSVLVAGRSGSAMTAQLGVMRVTEEIDALAAMG 244

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +     L+ P++ AL +++PLL +  +  A+ G  +  W    I    F         +A
Sbjct: 245 VSRSLRLVLPKVVALSLAMPLLVLWTSAIALFGGWVSAWVELGIGLQFFLRALPDAVPVA 304

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           N++ GL K       I +VA   G  V   + SL    T  VV +I++VI++D++FAI  
Sbjct: 305 NLYIGLAKGAVFGFLIALVACHFGLRVKPDTESLSANTTASVVAAITVVILVDAVFAIAT 364

Query: 369 FAIGI 373
            +IG+
Sbjct: 365 RSIGL 369


>gi|218780630|ref|YP_002431948.1| hypothetical protein Dalk_2788 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218762014|gb|ACL04480.1| protein of unknown function DUF140 [Desulfatibacillum alkenivorans
           AK-01]
          Length = 377

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 183/367 (49%), Gaps = 22/367 (5%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
           ++ R  G         +A  +  AI K    +  ++DL  +T +D  GA L+ +  +  H
Sbjct: 18  SILRLHGPLDQDAYFALAGPLRQAIKKGCAGE-LVIDLKDVTRLDDFGALLLAHVHKAAH 76

Query: 67  G---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
                  ++     + ++  L+ F  ++ I     ++    N F  L   I  K++    
Sbjct: 77  AVNSPCSIEAARPSVREVLDLLHF--QRLINAPALEKPKHENPFVALGGAIIDKVLGAKE 134

Query: 124 DSCSQAHILGLVISNTGE--FCAS---SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
                      +I  TG+   CA+    + F      ++  M  VGV  VP+V LI+F+ 
Sbjct: 135 -----------LIDFTGDVLLCAAIVVRHPFSMRWDDMLTAMRKVGVDAVPIVGLINFLL 183

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G ++A   + QL QFGA I+   L++I  +RE+G ++TA+++ GRSGSA  +EIG+MKI+
Sbjct: 184 GFIMAFMTSVQLKQFGANIYVAPLVAIAMVRELGPIMTAIVVTGRSGSAFASEIGAMKIS 243

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE+DA+ TMG + V  L+ P++ A +I +P+LT+ A    I+G  +V   + D+  + + 
Sbjct: 244 EEVDALSTMGFNPVVFLVMPKMTAAMIVMPILTVFACLFGILGGLLVGVVFLDLTLSNYL 303

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           S    + ++  +     KA   A  I  +    GF V   S+++G+  T+ VV  I ++I
Sbjct: 304 SETIDSLSMYAVNWCFFKAVVFAFLITWIGCLRGFQVKGGSSAVGEATTSSVVSGIFLII 363

Query: 359 IIDSLFA 365
           + D +FA
Sbjct: 364 LWDCIFA 370


>gi|297569477|ref|YP_003690821.1| protein of unknown function DUF140 [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925392|gb|ADH86202.1| protein of unknown function DUF140 [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 368

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 75/215 (34%), Positives = 125/215 (58%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
            MY VGV  +PV  L+ F+ G V++   A QL  FG E++ ID++ +  +RE+G +L A+
Sbjct: 152 NMYKVGVKAMPVAALVGFLIGVVLSYLSAMQLEAFGVEVYLIDILGLGIIRELGPVLVAI 211

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++AGRSGSA+ A++G M++ EEIDA+  MG+     L+ P++ AL + +PLL +  +  A
Sbjct: 212 LVAGRSGSAMTAQLGVMRVTEEIDALAAMGISRTIRLVLPKVLALTLVMPLLVLWTSAVA 271

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           ++G  +       I FA F  +      +AN++ GL K       I +VA   G  +  +
Sbjct: 272 LLGGMLSANMQLGISFAFFMEKLPQVVPIANLYIGLGKGAVFGLLIALVACHFGLRIRPN 331

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           + SL    T  VV +I+ VI++D++FA+    +G+
Sbjct: 332 TESLAAHTTASVVTAITTVILVDAVFAVMLRNVGV 366


>gi|195952560|ref|YP_002120850.1| protein of unknown function DUF140 [Hydrogenobaculum sp. Y04AAS1]
 gi|195932172|gb|ACG56872.1| protein of unknown function DUF140 [Hydrogenobaculum sp. Y04AAS1]
          Length = 327

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/343 (32%), Positives = 173/343 (50%), Gaps = 27/343 (7%)

Query: 31  INKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHR 90
           I+ SI      +D+  I ++DT GA  ++  +EKY  K +L G   HIE +         
Sbjct: 12  IDVSIFIKEHTIDIKDIEKLDTFGAIFVLELLEKYKDK-ELVGKKEHIEFI--------- 61

Query: 91  KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFK 150
                QK +    YN+ K        K    IN S +    +G+++ ++ +      +F+
Sbjct: 62  -----QKVKELLKYNNEKT-------KKDSNINLSLTFLEYIGILVYHSFK-NIKDIEFE 108

Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210
            FL    +++   G+  + ++ ++SF+ G VIA Q A +L  FGA IF ++L+ I   RE
Sbjct: 109 SFL----KEVESSGIGSLFILAVLSFLVGIVIAYQSANELISFGANIFIVNLIGISAFRE 164

Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
           +G L+T +++AGR  S   A IG   + EEIDAI  M +    +   PRI  L +  PLL
Sbjct: 165 LGPLITGIILAGRVSSGYTANIGIRNVYEEIDAIEVMSISPYVVFGLPRIITLTLITPLL 224

Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330
            + ++   ++G +I+     DIPF +FF R         +F GL+KAPF    IG+V   
Sbjct: 225 VLFSSNVMVLGGAIIANTSLDIPFDMFFDRLREVVGFNQVFVGLVKAPFFGAYIGLVGTY 284

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
            GF  G     +   V   VV SIS +I+ID+LF+I +  IGI
Sbjct: 285 FGFYSGKKPEDVTLNVMKSVVISISGIIVIDALFSIIFAKIGI 327


>gi|312797432|ref|YP_004030354.1| ABC transporter permease protein [Burkholderia rhizoxinica HKI 454]
 gi|312169207|emb|CBW76210.1| ABC transporter permease protein [Burkholderia rhizoxinica HKI 454]
          Length = 390

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 184/370 (49%), Gaps = 18/370 (4%)

Query: 10  RFAGNWKSPEIS------EIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           R  G W +  ++       IA  +    + + ++D+ + DLS I  +D +GA+  ++ + 
Sbjct: 32  RLGGQWTALSLALDQRRGGIAAKLRTLRDAAARADT-LWDLSPIQRLDHVGAQ-ALWQIW 89

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
             H    L    T   ++F  I+     + +  +P  +       +    +G  +  F  
Sbjct: 90  GRHLPCGLSLTDTQ-REIFERIALLDATR-EPAEPAAAI------DPITRLGLAVFGFAG 141

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                  +LG ++ + G       +     +S    +Y  G   +P+  L++F+ G V++
Sbjct: 142 HLRDGITLLGGLVIDCGRLLRDPRRIPWSEIS--ANVYAAGAQALPITALVAFLIGIVLS 199

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
              A QL  FGA  + ++++ +  +RE+G +L A+++AGRSGSAI A++G M++ EE+DA
Sbjct: 200 YLSAQQLRLFGANAYIVNILGLSIIRELGPVLAAILVAGRSGSAITAQLGVMRVTEELDA 259

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R MG+     LI PR+ AL +++PLL I  +  A+ G  +      +I  + F     S
Sbjct: 260 MRVMGISHGLRLILPRVIALGVAMPLLVIWTDAIALAGGMLAAQLVLNIDMSFFIRSLPS 319

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              +AN++ GL K       I +V    G  +  +S SLG+  TT VV SI++V++ D++
Sbjct: 320 VVPVANLYLGLGKGVAFGMLIALVGCHFGLRIKPNSQSLGEGTTTSVVSSITVVMLADAV 379

Query: 364 FAIFYFAIGI 373
           FAI +  IG+
Sbjct: 380 FAIMFQRIGL 389


>gi|241661797|ref|YP_002980157.1| hypothetical protein Rpic12D_0175 [Ralstonia pickettii 12D]
 gi|240863824|gb|ACS61485.1| protein of unknown function DUF140 [Ralstonia pickettii 12D]
          Length = 374

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 189/376 (50%), Gaps = 22/376 (5%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVD------LSAITEIDTIGAEL 57
           +G +V   +G+W +  ++E A      +  + Q   A +D      L+ +  ID  GA+L
Sbjct: 15  DGRSVAFLSGDWTTLALAERA-----GVRSARQQIRAGLDNANAWCLTEVGRIDHFGAQL 69

Query: 58  IMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
           +     +  G    + +    +Q   ++    +      K + +   N    L    G+ 
Sbjct: 70  LW----RAWGNQWPEHLDARPDQR-RMLDRVAKLDPGGWKQRLAPRMNPVAIL----GEG 120

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           ++ F + + +   ++G ++ + G F  + ++  G    +   +Y  G   + +  L+ F+
Sbjct: 121 MLDFFDHASNGIAMVGQLVFDLGRFVRAPHR--GPWREISANIYSTGYKALGITALVGFL 178

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V++   A QL  FGA IF ++++ +  +RE+G +L A+++AGRSGSAI A+IG M++
Sbjct: 179 IGIVLSYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRV 238

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EE+DA+R MG+     LI P++ AL I++PLL    +  A+ G  +      DI    F
Sbjct: 239 TEELDAMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYF 298

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            +       +AN++ G+ K       I +VA   G  +  ++ SLG+  TT VV SI+IV
Sbjct: 299 ITSLPDAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIV 358

Query: 358 IIIDSLFAIFYFAIGI 373
           I+ D++FAI +  +GI
Sbjct: 359 ILADAVFAILFKDVGI 374


>gi|253828165|ref|ZP_04871050.1| inner membrane protein yrbE [Helicobacter canadensis MIT 98-5491]
 gi|313142364|ref|ZP_07804557.1| ABC transporter [Helicobacter canadensis MIT 98-5491]
 gi|253511571|gb|EES90230.1| inner membrane protein yrbE [Helicobacter canadensis MIT 98-5491]
 gi|313131395|gb|EFR49012.1| ABC transporter [Helicobacter canadensis MIT 98-5491]
          Length = 371

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 187/378 (49%), Gaps = 24/378 (6%)

Query: 3   ENGITVFRFAGNW--KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           +N I + + +G W  K P+   +  D +   N  I+     ++L+   ++D  G E++  
Sbjct: 9   DNDIYILKLSGLWDYKIPKSLLLRLDSIKLTNVKIK-----IELAENFDLDFCGGEILER 63

Query: 61  FMEKYHGK-IKLQGV---STHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116
           ++     K I L+      +  +Q+F +++ T +  +K    Q       F  LH+   +
Sbjct: 64  WILALESKNIVLENALKNHSKSQQIFQILA-TRKNPLKQDMVQ------DFIKLHWDSFQ 116

Query: 117 KIVKFINDSCSQAHILGLVISN--TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
            I  F  DS       G ++    +      + + K  L  +   +    V  + +V L 
Sbjct: 117 IIKGFFKDSLMAIGFFGEILYAWFSSLLQPKNIRLKATLYCIQESL----VKAIGIVALA 172

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
            F+ G VIA QG+ QL QFGA I  +++ S+L LRE+  ++TA++IAGRS SA  AEIG 
Sbjct: 173 CFLIGIVIAYQGSIQLGQFGASILIVEMSSMLTLREMAPIITAIIIAGRSASAFSAEIGM 232

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           M+  +EIDA+R MG D +  L+ PR+ AL + LPL+  +A+   ++GA +V      I  
Sbjct: 233 MRATQEIDAMRVMGFDPITFLVLPRMLALCLVLPLVVFIADLFGLLGAMLVCQLQLGIGT 292

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
             F  RF     + + + G+ KAPF    I  V    GF V   + S+G   T  VV+SI
Sbjct: 293 EQFVERFLQVVDMRHFWVGIAKAPFFGLIISFVGCFHGFIVAKDTRSIGVHTTKSVVESI 352

Query: 355 SIVIIIDSLFAIFYFAIG 372
            +VI  D+L ++ +  +G
Sbjct: 353 FLVIAFDALCSVVFTEMG 370


>gi|224418846|ref|ZP_03656852.1| toluene ABC transporter permease [Helicobacter canadensis MIT
           98-5491]
          Length = 375

 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 187/378 (49%), Gaps = 24/378 (6%)

Query: 3   ENGITVFRFAGNW--KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           +N I + + +G W  K P+   +  D +   N  I+     ++L+   ++D  G E++  
Sbjct: 13  DNDIYILKLSGLWDYKIPKSLLLRLDSIKLTNVKIK-----IELAENFDLDFCGGEILER 67

Query: 61  FMEKYHGK-IKLQGV---STHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116
           ++     K I L+      +  +Q+F +++ T +  +K    Q       F  LH+   +
Sbjct: 68  WILALESKNIVLENALKNHSKSQQIFQILA-TRKNPLKQDMVQ------DFIKLHWDSFQ 120

Query: 117 KIVKFINDSCSQAHILGLVISN--TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
            I  F  DS       G ++    +      + + K  L  +   +    V  + +V L 
Sbjct: 121 IIKGFFKDSLMAIGFFGEILYAWFSSLLQPKNIRLKATLYCIQESL----VKAIGIVALA 176

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
            F+ G VIA QG+ QL QFGA I  +++ S+L LRE+  ++TA++IAGRS SA  AEIG 
Sbjct: 177 CFLIGIVIAYQGSIQLGQFGASILIVEMSSMLTLREMAPIITAIIIAGRSASAFSAEIGM 236

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           M+  +EIDA+R MG D +  L+ PR+ AL + LPL+  +A+   ++GA +V      I  
Sbjct: 237 MRATQEIDAMRVMGFDPITFLVLPRMLALCLVLPLVVFIADLFGLLGAMLVCQLQLGIGT 296

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
             F  RF     + + + G+ KAPF    I  V    GF V   + S+G   T  VV+SI
Sbjct: 297 EQFVERFLQVVDMRHFWVGIAKAPFFGLIISFVGCFHGFIVAKDTRSIGVHTTKSVVESI 356

Query: 355 SIVIIIDSLFAIFYFAIG 372
            +VI  D+L ++ +  +G
Sbjct: 357 FLVIAFDALCSVVFTEMG 374


>gi|187927276|ref|YP_001897763.1| hypothetical protein Rpic_0168 [Ralstonia pickettii 12J]
 gi|309780024|ref|ZP_07674777.1| competence protein ComM [Ralstonia sp. 5_7_47FAA]
 gi|187724166|gb|ACD25331.1| protein of unknown function DUF140 [Ralstonia pickettii 12J]
 gi|308921194|gb|EFP66838.1| competence protein ComM [Ralstonia sp. 5_7_47FAA]
          Length = 374

 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 189/376 (50%), Gaps = 22/376 (5%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVD------LSAITEIDTIGAEL 57
           +G +V   +G+W +  ++E A      +  + Q   A +D      L+ +  ID  GA+L
Sbjct: 15  DGRSVAFLSGDWTTLALAERA-----GVRSARQQIRAGLDNANAWCLTEVGRIDHFGAQL 69

Query: 58  IMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
           +     +  G    + +    +Q   ++    +      K + +   N    L    G+ 
Sbjct: 70  LW----RAWGNQWPEHLDARPDQR-RMLDRVAKLDPGGWKQRLAPRMNPVAIL----GEG 120

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           ++ F + + +   ++G ++ + G F  + ++  G    +   +Y  G   + +  L+ F+
Sbjct: 121 MLDFFDHAGNGIAMVGQLVFDLGRFVRAPHR--GPWREISANIYSTGYKALGITALVGFL 178

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V++   A QL  FGA IF ++++ +  +RE+G +L A+++AGRSGSAI A+IG M++
Sbjct: 179 IGIVLSYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRV 238

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EE+DA+R MG+     LI P++ AL I++PLL    +  A+ G  +      DI    F
Sbjct: 239 TEELDAMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYF 298

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            +       +AN++ G+ K       I +VA   G  +  ++ SLG+  TT VV SI+IV
Sbjct: 299 ITSLPDAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIV 358

Query: 358 IIIDSLFAIFYFAIGI 373
           I+ D++FAI +  +GI
Sbjct: 359 ILADAVFAILFKDVGI 374


>gi|145589257|ref|YP_001155854.1| hypothetical protein Pnuc_1074 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145047663|gb|ABP34290.1| protein of unknown function DUF140 [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 393

 Score =  140 bits (352), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 181/379 (47%), Gaps = 27/379 (7%)

Query: 4   NGI-TVFRFAGNWKSPEISEIADDVVMAINKSIQS--DSAIVDLSAITEIDTIGAELIMY 60
           NG+  V+   G W        A D  +  + ++ S   S   D++ +  +D  G   I+ 
Sbjct: 31  NGVVNVYTLGGVWTQ---VRAAQDAWLHSSSTVNSAAKSLTCDVTKVETLDGAGIAFIIA 87

Query: 61  FMEKYH---GKIKLQGVSTHIEQL---FSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI 114
             E      G  +L G++   + L   F  IS      +   KPQR F  N        I
Sbjct: 88  LQEAQTVAGGNFELIGLAERYQPLLKEFDPISNLFPAPVA--KPQRGFVTN--------I 137

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLL-SLIRQMYYVGVSGVPVVIL 173
           G      I DS      LG + S   +   S    K       +      G++ +P++ L
Sbjct: 138 GMGTANLIKDSKGLITFLGHLGS---DLVWSVRNLKHVRWGDFVNAAVEAGINALPIIGL 194

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           ++F+ G +++ Q A  + QFGA  F   L ++  +RE+G L+TA+++AGRS +A  AEIG
Sbjct: 195 VAFLIGVILSFQAAIGMKQFGAVSFVGPLAALGIVREMGPLITAILLAGRSSAAFAAEIG 254

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           +M +N E+DA+ + GL  +R L+ PR+ A I+  P+LT+ A+  +I  AS++    Y IP
Sbjct: 255 TMTVNSEVDALVSGGLSPMRFLVVPRVLAGILVAPILTLFADIVSIF-ASMLTMLIYGIP 313

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
           F  F++   S   + ++ +GLIKA      +  V    G   G  + ++G   T  VV S
Sbjct: 314 FINFYNGMLSAVDVEDVTSGLIKATLFGVVVSAVGCLRGMQTGNGAAAVGISATRAVVSS 373

Query: 354 ISIVIIIDSLFAIFYFAIG 372
           I +++I+D +FA   +  G
Sbjct: 374 IVMIVIVDGIFAFISYKTG 392


>gi|323524591|ref|YP_004226744.1| hypothetical protein BC1001_0219 [Burkholderia sp. CCGE1001]
 gi|323381593|gb|ADX53684.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1001]
          Length = 389

 Score =  139 bits (351), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 78/215 (36%), Positives = 128/215 (59%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
            +Y  G   +P+  L++F+ G V++   A QL  FGA  + ++++ +  +RE+G +L+A+
Sbjct: 174 NVYNAGTKALPITALVAFLIGIVLSYLSAQQLRLFGANQYIVNILGLSVIRELGPVLSAI 233

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++AGRSGSAI A+IG M++ EE+DA+R MG+     LI PR+ AL +++PLL +  N  A
Sbjct: 234 LVAGRSGSAITAQIGVMRVTEELDAMRVMGIPHGLRLILPRVVALGVAMPLLVMWTNIIA 293

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           + G ++       I  + F         +AN++ GL K       I IV    GF +  +
Sbjct: 294 LTGGALAAKIVLGIDMSYFARALPGVVPVANLWIGLGKGVAFGMLIAIVGCHFGFRIKAN 353

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           S SLG+  T+ VV SI+IVI+ D++FAI +  +G+
Sbjct: 354 SQSLGEGTTSSVVTSITIVILADAVFAILFQNVGL 388


>gi|298530599|ref|ZP_07018001.1| protein of unknown function DUF140 [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298509973|gb|EFI33877.1| protein of unknown function DUF140 [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 379

 Score =  139 bits (351), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 177/342 (51%), Gaps = 27/342 (7%)

Query: 41  IVDLSAITEIDTIGAELIMYF---MEKYHGKIKLQGVSTHIEQLFSLIS-FTHRKKIKNQ 96
           ++D+  +  +D  G  L+++F   M+  +  ++++G+   + ++   I  F  R +   +
Sbjct: 56  VLDVEKVDYMDMSGQALLLHFSRQMQDRNLSVEVRGLRPELREIQEEIDCFDCRPRPMQR 115

Query: 97  KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCAS---SYKFKGFL 153
           K       ++ + L    G+  V    D+           S  GEF +S   S    G +
Sbjct: 116 K------LSALEEL----GRAAVNLGRDTRQ-------FFSFVGEFVSSFAYSLTHPGTV 158

Query: 154 L--SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211
               ++  M  VG   V ++ L+ F+ G +IA Q A  L  FGAEIF   L+ +  +RE+
Sbjct: 159 RWKDVLSHMEAVGGRAVFIIALMGFLIGVIIAFQTAITLRAFGAEIFVAKLLGLSIVREL 218

Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271
           G L+T++++AGRSGSA  AEIG+MK NEEI+A++TMGL  VR L+ PR+ A ++  PLL 
Sbjct: 219 GPLVTSIILAGRSGSAFAAEIGTMKTNEEINALQTMGLSPVRFLVVPRMLAAMLVTPLLC 278

Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
           I     + IG ++V+    D     +  +  ++  + +    ++K    +  +  +    
Sbjct: 279 IFFLLFSFIGGALVMLS-MDFTLTTYIHQLKTSVGMTDFLGSMVKVFVFSILVAWIGCVR 337

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           G   G  ++++G+  T+ VV +I ++I+ D +FA+ Y+ +GI
Sbjct: 338 GLQTGSGASAVGRSTTSAVVSAIVLIILADGIFAVVYYMLGI 379


>gi|91776717|ref|YP_546473.1| hypothetical protein Mfla_2365 [Methylobacillus flagellatus KT]
 gi|91710704|gb|ABE50632.1| protein of unknown function DUF140 [Methylobacillus flagellatus KT]
          Length = 373

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 178/365 (48%), Gaps = 17/365 (4%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72
           G W    +     ++  A+      + A  DL+ + ++DT GA ++      + GK++ +
Sbjct: 22  GQWSLRALDNDFAELRRALKPYFSDEKAQWDLTQVEQLDTAGAAVLW---NGWQGKMEGR 78

Query: 73  GVSTHIEQ--LFSLISFTHRKKIKNQKPQRSFF--YNSFKNLHYHIGKKIVKFINDSCSQ 128
            V+   EQ  LF  ++      +  + P+  +      F  L   I   +V F+      
Sbjct: 79  -VTLTDEQVALFDTLASIETTTVAEKPPRFDWLKLVAGFGKLTIFISSHVVDFVKLIGLL 137

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG ++    +F    +            +Y  GV+ +PV  L+ F+ G  ++   A 
Sbjct: 138 VLELGYLLRRPQDFPWREFS---------ANIYKSGVTALPVTALLGFMIGIAMSYLMAT 188

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           QL  FGA+IF ++++ +  +RE+G +L AV++AGRSGS++ A+IG M++ EEIDA+ TMG
Sbjct: 189 QLRTFGADIFIVNILGLAVIRELGPILMAVLVAGRSGSSMAAQIGVMRVTEEIDALATMG 248

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +  +  ++ P++  L +  P L I  +  A++G ++       + F  FF    +     
Sbjct: 249 ISRILRVVLPKVLGLTVIAPFLVIWTSCWALLGGALSANIELGLGFRFFFDYLAAVVQPV 308

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           NI  GLIK       + ++A   G  +  ++ SL +  T+ VV +I+ VI+ID+ FAI  
Sbjct: 309 NITLGLIKGVMFGFIVAVMACHFGLRIKPNTESLSRSTTSSVVTAITCVILIDAAFAIIT 368

Query: 369 FAIGI 373
             IG+
Sbjct: 369 SGIGV 373


>gi|241767246|ref|ZP_04764987.1| protein of unknown function DUF140 [Acidovorax delafieldii 2AN]
 gi|241362094|gb|EER58209.1| protein of unknown function DUF140 [Acidovorax delafieldii 2AN]
          Length = 373

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 188/365 (51%), Gaps = 18/365 (4%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIV---DLSAITEIDTIGAELIM-YFMEKYHGK 68
           G W + E+ + +     A++  ++ ++A     DL  +  +D +GA+L+  ++ + + G+
Sbjct: 23  GRWGAAELGQRSQ--WRALSAQLRDNTAPAGGWDLRGLDWLDHVGAQLLWDHWGQAWPGR 80

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
           ++L         L  + +FT        +P R        +   H+G  ++  ++ +   
Sbjct: 81  LEL--TDPQRAMLERVGAFT--APPPPAEPWR------LADQADHLGVLVLHGLDHARHV 130

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             ++G +  +      + ++     +S    +Y +G + +P+  L+ F+ G V+A   + 
Sbjct: 131 VQLIGQLALDLLRLVRAPHRAPWRDMS--GHVYRMGATALPITALVGFLIGVVLAYLMSL 188

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           QL Q+GAE F ++++ I  +RE+G +L A+++AGRSGS+I A+IG M++ EE+DA+R MG
Sbjct: 189 QLRQYGAESFIVNILGISLIRELGPMLAAILVAGRSGSSITAQIGVMRVTEELDAMRVMG 248

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +     L+ PR  AL +++PL+++    +A+ G  +       I  A F     +   + 
Sbjct: 249 IPHGFRLVMPRTLALALAMPLISVWTTLAALAGGMLAADVSMGISPAYFVEALPAAVKIG 308

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           N+     K+      I ++    G  V  ++ SLG+  T  VV SI++VII+D+LFA+ +
Sbjct: 309 NLGLATAKSVVFGALIALIGCHWGLRVKPNTQSLGEGTTASVVTSITMVIIVDALFAVAF 368

Query: 369 FAIGI 373
             IGI
Sbjct: 369 KNIGI 373


>gi|329905881|ref|ZP_08274264.1| ABC-type transport system [Oxalobacteraceae bacterium IMCC9480]
 gi|327547452|gb|EGF32273.1| ABC-type transport system [Oxalobacteraceae bacterium IMCC9480]
          Length = 372

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 186/378 (49%), Gaps = 33/378 (8%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIV--------DLSAITEIDTIGAEL 57
           ++V   +G W   ++  +AD  V+      Q D+A+         DL+ IT ID IGA+ 
Sbjct: 16  LSVIVASGAW---QVHALADAGVIG-----QLDAALARLTKPTGWDLTQITAIDHIGAQ- 66

Query: 58  IMYFMEKYHGKIKLQGV--STHIEQLFSLISFTHRKKIKN-QKPQRSFFYNSFKNLHYHI 114
              ++    GK +  G+  S   ++ F  +       +   QKP+       +K L   +
Sbjct: 67  ---WLWNVWGKTRPPGLVLSDRQDEFFQRLEQAGPLTLPEVQKPR-------WKQL-IRL 115

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
           G +             +LG ++ +   F  +  +  G    +   +Y  G   + +  L+
Sbjct: 116 GARTQSLTGHLIDVVGLLGQLMFDLRRFALNPRR--GPWKEISSNIYRTGYQALGITALV 173

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
             + G V++   A QL  FG +I+ ++++ +  +RE+G LL A+++AGRSGS+I A++G 
Sbjct: 174 GMLIGVVLSYLSAQQLHSFGGDIYLVNILGMSIIRELGPLLAAILVAGRSGSSITAQLGV 233

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           M++NEE+DA+  MGL     LI P++ AL I++PLL I  +  A++G  +       +  
Sbjct: 234 MRVNEELDAMLVMGLPHGFRLIMPKVLALAIAMPLLVIWTDAMALLGGMVAANLELGLSP 293

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
             F  +      LAN + G+ K       I +VA   GF +  ++ SLG   T+ VV +I
Sbjct: 294 RYFLHKLPDAVPLANYWIGIGKGVVFGGLIALVACHFGFRIKANTESLGAGTTSSVVTAI 353

Query: 355 SIVIIIDSLFAIFYFAIG 372
           ++VI+ D++FAI +  +G
Sbjct: 354 TVVILADAVFAIVFSGVG 371


>gi|257092687|ref|YP_003166328.1| hypothetical protein CAP2UW1_1065 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257045211|gb|ACV34399.1| protein of unknown function DUF140 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 370

 Score =  138 bits (347), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 173/344 (50%), Gaps = 18/344 (5%)

Query: 33  KSIQSDSAIVDLSAITEIDTIGAELIMY-FMEKYHGKIKLQGVSTHIEQLFSLISFTHRK 91
           + + S  A  DL +I  +D+  A ++   +  ++   + L G    +            +
Sbjct: 40  RELASREAAWDLLSIARLDSAAAVVLWRSWGRRWPASLALSGEHRLL--------LERVE 91

Query: 92  KIKNQKPQRSFFYNSFKNLHYHI--GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKF 149
            I    P R       + L + +  G+  +  +++      ++G ++ + G  CA     
Sbjct: 92  AIPADLPARPS-----ERLGWLLVPGRLALAAVDNLAGMVALVGQMVLDVGHLCAHPRDI 146

Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209
                S    +Y  G   +PV  LI F+ G V++   A QL  FGA++F ++L+ I  +R
Sbjct: 147 PWREFS--ANLYKSGAQALPVTALIGFLIGIVLSYLSALQLKTFGADVFIVNLLGISIVR 204

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
           E+G +L AV++AGRSGSA+ A++G M++ EEIDA+ TMG+     L+ P+I AL +++PL
Sbjct: 205 ELGPVLVAVLVAGRSGSAMTAQLGVMRVTEEIDALATMGVSRSLRLVLPKIIALAVAMPL 264

Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329
           L +  + + I+G  I      D+ +  F         +AN++ G+ K       IG+VA 
Sbjct: 265 LVVWCSAAGIVGGMIAARLQMDLSYGFFIDTLPRVVPVANLWIGMSKGLVFGMLIGLVAC 324

Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
             G  V  ++ SL  + TT VV SI++ I++D++FAI   + GI
Sbjct: 325 HFGLRVKPNTESLSSQTTTSVVTSITVAILVDAVFAIMTRSFGI 368


>gi|254480123|ref|ZP_05093371.1| conserved domain protein [marine gamma proteobacterium HTCC2148]
 gi|214039685|gb|EEB80344.1| conserved domain protein [marine gamma proteobacterium HTCC2148]
          Length = 376

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/213 (38%), Positives = 127/213 (59%), Gaps = 1/213 (0%)

Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
           Y  G     ++ L S + G ++A  GA QL QFGAE++  DL+ I  LRE+GVL+ A+++
Sbjct: 165 YQAGPDAFAIISLTSVLVGMILAYLGAVQLQQFGAEVYVADLVVIGMLREMGVLMAAIVM 224

Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280
           AGR+G+A  A++G+M+ NEEIDAIRTMG+  +  L+ PR+ AL++++PLLT+ AN   II
Sbjct: 225 AGRTGAAYAAQLGTMQANEEIDAIRTMGISPMEFLVVPRMLALVVAMPLLTLYANLLGII 284

Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
           G  IV       P  ++ S   +   L+++  GLIK+      I +   + G   G  S 
Sbjct: 285 GGGIVSGGLGVTPL-MYISEGETALQLSHLSVGLIKSVVFGVLIAVAGCRSGINSGRSSA 343

Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           ++G+  T  VV +I  +I+ D+   I +  +GI
Sbjct: 344 AVGQAATQAVVTAIVYLIVADAAINILFQQVGI 376


>gi|107023833|ref|YP_622160.1| hypothetical protein Bcen_2286 [Burkholderia cenocepacia AU 1054]
 gi|105894022|gb|ABF77187.1| protein of unknown function DUF140 [Burkholderia cenocepacia AU
           1054]
          Length = 425

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 181/380 (47%), Gaps = 65/380 (17%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           R  G W +  ++     V   I        +  DLS I  +D +G + +     +  G+ 
Sbjct: 94  RLTGQWTALSLARNRGAVARRIASIAAGRVSEWDLSGIERLDHVGGQALW----RVWGRK 149

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
              GV+    Q  ++     R   + + P+R                 IV+F  D  ++ 
Sbjct: 150 LPAGVALSATQ-RTIFERIERLDSEREAPER-----------------IVRF--DPVTR- 188

Query: 130 HILGLVISNTGEFCASSYKFKGFL----LSLIRQ------------MYYVGVSGVPVVIL 173
             LGL I   GE         G +    LS++R+            +Y  G   +P+  L
Sbjct: 189 --LGLAIFAFGEHLQGGITMFGRVILDALSVLRRPKTMPWKETSANIYSAGAQALPITAL 246

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           ++F+ G V++   A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG
Sbjct: 247 VAFLIGIVLSYLSAQQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIG 306

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
            M++ EE+DA+R MG+     LI PR+ AL +++PLL +  N  A+ G          +P
Sbjct: 307 VMRVTEELDAMRVMGIPHGLRLILPRVLALGVAMPLLVMWTNIIALPGV---------VP 357

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
                        +AN++ G+ K       I +VA   GF +  +S SLG+  TT VV S
Sbjct: 358 -------------IANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSS 404

Query: 354 ISIVIIIDSLFAIFYFAIGI 373
           I++VI+ D++FAI +  +G+
Sbjct: 405 ITVVILADAVFAILFQNVGL 424


>gi|71906845|ref|YP_284432.1| hypothetical protein Daro_1206 [Dechloromonas aromatica RCB]
 gi|71846466|gb|AAZ45962.1| Protein of unknown function DUF140 [Dechloromonas aromatica RCB]
          Length = 368

 Score =  137 bits (344), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 168/333 (50%), Gaps = 16/333 (4%)

Query: 43  DLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF 102
           DLSA+T +D+  A L+      + G+      S  ++++   +      ++  + P++  
Sbjct: 47  DLSAVTRLDSAAAVLLW---RTWGGQWP---ASLDVDEMHRAV-LVRVAELPREMPEQVL 99

Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFL--LSLIRQM 160
                 +L   IG  + K + +      + G ++ +    CA  ++    +        +
Sbjct: 100 ---PRVHLPEFIGVLLFKALANVRGMVALFGQLLLD----CAYLFRHPKDVPWREFTSNV 152

Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
           Y  G   +PV  L+ F+ G  I+   A QL  FGA++F ++++ I  +RE+G +L AV++
Sbjct: 153 YKAGALALPVTALVGFLIGVTISYLSALQLKSFGADLFIVNILGISIIRELGPVLVAVLV 212

Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280
           AGRSGSA+ A+IG M++ EEIDA+ TMG+     ++ P+++ L +++PLL +  +  A+ 
Sbjct: 213 AGRSGSAMTAQIGVMRVTEEIDALSTMGISRSIRVVLPKVFGLTVAMPLLVLWTSAVALF 272

Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
           G  +      D+    F         +AN+F GL K         +VA   G  V  ++ 
Sbjct: 273 GGMLAALMQLDLSLIYFLENLPRAVPVANLFIGLGKGLVFGFVTAVVACHFGLHVKPNTE 332

Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           SL    T+ VV +I+ VI++D++FAIF   IG+
Sbjct: 333 SLSANTTSAVVTAITSVILVDAIFAIFTRQIGV 365


>gi|258593363|emb|CBE69702.1| toluene transporter subunit: membrane component of ABC superfamily
           [NC10 bacterium 'Dutch sediment']
          Length = 247

 Score =  137 bits (344), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 135/228 (59%), Gaps = 4/228 (1%)

Query: 143 CASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDL 202
           CA +  F      LIRQ+ ++GV  + +  + +  TG V+A Q A+ LS+FGA+ +   +
Sbjct: 18  CACTPPFNP--RELIRQVDHIGVKSISIAGVAAAFTGLVLALQTAYGLSRFGAKAYVGII 75

Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
           +S+  +RE+G +LTA+++ GR GS I AE+GSMK+ E+IDA+R MG + V+ L+ PR+ +
Sbjct: 76  VSLSMVRELGPVLTALLVGGRVGSGITAELGSMKVTEQIDAMRAMGANPVKKLVVPRVLS 135

Query: 263 LIISLPLLTILANFSAIIGASIVIWKY-YDIPFAVFFSRFHSTATLANIFTGLIKAPFMA 321
            ++ LPLLT++A+   I+G  +VI KY + + +  +++      TLA+I +GL K     
Sbjct: 136 TMLVLPLLTVMADILGILGG-MVISKYEFQVDYHFYYNTVTRNLTLADIVSGLGKTVVFG 194

Query: 322 CAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
             I IV   +G A    +  LGK  T  VV S   VII D     F++
Sbjct: 195 FIIAIVGCYKGLATVGGTEGLGKATTATVVTSAIAVIISDFFLTKFFW 242


>gi|113866165|ref|YP_724654.1| putative uncharacterized transport protein [Ralstonia eutropha H16]
 gi|113524941|emb|CAJ91286.1| putative uncharacterized transport protein [Ralstonia eutropha H16]
          Length = 378

 Score =  136 bits (342), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 165/338 (48%), Gaps = 13/338 (3%)

Query: 37  SDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ-GVSTHIEQLFSLISFTHRKKIKN 95
            DSA   L+ +  +D IG +L+    + ++G +  +   S    ++F  I+    +  K 
Sbjct: 53  PDSAQWSLAGVERLDHIGGQLLW---QAWNGALPQRLDASEGQRRVFERIAAVQNEGWKK 109

Query: 96  QKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLS 155
               R   +N         G  ++ F     S   +LG +  +   F     +  G    
Sbjct: 110 HMVDR---FNPIT----LFGANVLSFGAQLRSGITMLGQLAFDLLRFAGVPQR--GPWRE 160

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +   +Y VG   + +  L+ F+ G V++   A QL  FGA  F ++++ +  +RE+G +L
Sbjct: 161 ISANIYNVGYKALGITALVGFLIGIVLSYLSANQLRTFGASTFIVNILGMAVIRELGPVL 220

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++IAGRSGSAI A+IG M++ EE+DA+R MG+     LI PR+ AL I++PLL    +
Sbjct: 221 AAILIAGRSGSAITAQIGVMRVTEELDAMRVMGISHGFRLIMPRVIALAIAMPLLVAWTD 280

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             A+ G  +       I    F         +AN++ GL K       I + A   G  +
Sbjct: 281 VMALAGGMLAARMQLGISATFFLRELPDAVPVANLWLGLGKGVVFGILIALTACHFGLRI 340

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
             ++ SLG+  T  VV +I+IVI+ D++FA+ +  +G+
Sbjct: 341 KPNTQSLGEGTTASVVTAITIVILADAVFAVLFKDVGL 378


>gi|149907972|ref|ZP_01896640.1| membrane protein, putative [Moritella sp. PE36]
 gi|149808978|gb|EDM68909.1| membrane protein, putative [Moritella sp. PE36]
          Length = 262

 Score =  136 bits (342), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 128/217 (58%), Gaps = 5/217 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +I Q+Y++G   + V+ +    TG V+  QG + LS+FG+       +++  +RE+G +L
Sbjct: 44  VIEQLYFIGAKSIIVICVTGLFTGMVLGLQGYYTLSKFGSTGLLGSAVALTLIRELGPVL 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA+MI GR+GSA+ AEIG M+I+E+IDA++TM +D +R L+SPRI A +IS PLLT + +
Sbjct: 104 TAIMIIGRAGSAMTAEIGIMRISEQIDALKTMTIDPIRFLVSPRIIAALISFPLLTAIFD 163

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              I G  +   +   I  A +F R  S+  +A++  G IK+ F +  +  V    G+  
Sbjct: 164 TVGIFGGYLTGSQLLGINPATYFYRVESSVIMADVAGGFIKSIFFSITVITVCCYHGYYT 223

Query: 336 GVHSNSLGKK-----VTTCVVQSISIVIIIDSLFAIF 367
            +  ++ G K      TT VVQ+  +V++ID +   F
Sbjct: 224 HIRRDNFGAKGVGLSTTTAVVQASILVLVIDYILTTF 260


>gi|89902676|ref|YP_525147.1| hypothetical protein Rfer_3917 [Rhodoferax ferrireducens T118]
 gi|89347413|gb|ABD71616.1| protein of unknown function DUF140 [Rhodoferax ferrireducens T118]
          Length = 376

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 133/224 (59%)

Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209
           KG    +   ++ +G + +P+  L+ F+ G V+A   + QL QFGA+ F ++++ +  +R
Sbjct: 153 KGPWRDVSGHLFSIGATALPITALLGFLIGVVLAYLMSLQLRQFGADSFIVNILGLSVIR 212

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
           E+G +L A++IAGRSGS I A+IG M++ EE+DA+R MG+     L+ PR  A+ +++PL
Sbjct: 213 ELGPVLAAILIAGRSGSTITAQIGVMRVTEELDAMRVMGIAKGYRLVLPRAIAMALAMPL 272

Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329
           LT+  + +A++G  +       +  A FF+       ++N+   + K+      I ++  
Sbjct: 273 LTVWTSLAALLGGMLAADLTMGVTPAYFFAALPRAVEVSNLTLAMGKSVVFGLLIALIGC 332

Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
             G  V  ++ SLG+  T  VV SI++VI++D++FA+ +  IGI
Sbjct: 333 HYGLRVKPNTESLGQGTTASVVTSIAMVILVDAVFALVFKDIGI 376


>gi|160895814|ref|YP_001561396.1| hypothetical protein Daci_0365 [Delftia acidovorans SPH-1]
 gi|160361398|gb|ABX33011.1| protein of unknown function DUF140 [Delftia acidovorans SPH-1]
          Length = 376

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 177/364 (48%), Gaps = 11/364 (3%)

Query: 11  FAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
             G+W + E+   A    + A     + D    +L  +  +D +GA+L+      + G+ 
Sbjct: 23  LTGSWGAAELGRRAQWRKLRAQLADAKGDDLGWNLEGLDWLDHVGAQLLW----NHWGRR 78

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
               ++    Q   L       K     P R        +L    G  ++          
Sbjct: 79  LPARLAASDAQRAMLERVGRFSKEPAPPPPRLNLLERIDSL----GCLVINACGHFAQMT 134

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
            ++G ++ +   F  + ++  G    +   +Y +G + +P+  L+ F+ G V+A   A Q
Sbjct: 135 RLIGQLLIDLLRFARAPHR--GPWRDISGHLYSMGATALPITALVGFLIGVVLAYLMALQ 192

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L QFGAE F ++++ I  +RE+G LL A+++AGR+GSAI A+IG M++ EE+DA++ MG+
Sbjct: 193 LRQFGAESFIVNILGISLIRELGPLLAAILVAGRTGSAITAQIGVMRVTEELDAMQVMGI 252

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
                L+ PR  AL I++PL+++    +A+ G  +       +  A F     +   + N
Sbjct: 253 PHGFRLVLPRALALAIAMPLVSLWTTLAALAGGMLAADLTMGVTGAYFAEALPAAVKIGN 312

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           ++  + K+      I ++    G  V  ++ SLGK  T  VV +I++VI++D++FAI + 
Sbjct: 313 LWIAMGKSVVFGALIALIGCHWGLRVEPNTQSLGKGTTASVVTAITMVIVVDAIFAILFK 372

Query: 370 AIGI 373
            +GI
Sbjct: 373 DVGI 376


>gi|83748501|ref|ZP_00945522.1| ABC transporter permease protein [Ralstonia solanacearum UW551]
 gi|207742154|ref|YP_002258546.1| abc-type transport system involved in resistance to organic
           solvents, permease component protein [Ralstonia
           solanacearum IPO1609]
 gi|83724805|gb|EAP71962.1| ABC transporter permease protein [Ralstonia solanacearum UW551]
 gi|206593542|emb|CAQ60469.1| abc-type transport system involved in resistance to organic
           solvents, permease component protein [Ralstonia
           solanacearum IPO1609]
          Length = 374

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 186/373 (49%), Gaps = 16/373 (4%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITE---IDTIGAELIMY 60
           +G +V   +G+W +  ++E A   V +  + I++     +   +TE   ID  GA+L+  
Sbjct: 15  DGRSVAYLSGDWTTLALAERAG--VRSARRQIRAGLDNANAWCLTEVGRIDHFGAQLLW- 71

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
              +  G    + +    +Q   +I    R      K + +   N    L    G  ++ 
Sbjct: 72  ---RAWGNRWPEHLDARADQ-RRMIDRVARLDPGGWKKRIAPRINPVTVL----GGAMID 123

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           F +       ++G ++ +   F  + ++  G    +   +Y  G   + +  L+ F+ G 
Sbjct: 124 FADHLRIGVAMVGQLMFDLLRFVRAPHR--GPWREISANIYSTGYKALGITALVGFLIGI 181

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V++   A QL  FGA IF ++++ +  +RE+G +L A+++AGRSGSAI A+IG M++ EE
Sbjct: 182 VLSYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEE 241

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +DA+R MG+     LI P++ AL I++PLL    +  A+ G  +      DI    F + 
Sbjct: 242 LDAMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITS 301

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                 +AN++ G+ K       I +VA   G  +  ++ SLG+  TT VV SI+IVI+ 
Sbjct: 302 LPDAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIVILA 361

Query: 361 DSLFAIFYFAIGI 373
           D++FAI +  +GI
Sbjct: 362 DAVFAILFKDVGI 374


>gi|188590871|ref|YP_001795471.1| hypothetical protein RALTA_A0076 [Cupriavidus taiwanensis LMG
           19424]
 gi|170937765|emb|CAP62749.1| conserved hypothetical protein, DUF140; putative TRANSMEMBRANE
           PROTEIN [Cupriavidus taiwanensis LMG 19424]
          Length = 376

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 185/380 (48%), Gaps = 28/380 (7%)

Query: 4   NGITVFRFAGNWKSPEISEI--ADDVVMAINKSIQS-DSAIVDLSAITEIDTIGAELIMY 60
           +G    +  G+W +  ++    A  +   +++  Q+ D A   L+ +  +D IG +L+  
Sbjct: 15  DGTVSVQLRGDWTALALAGCHQARQLRAQLHELAQAPDHAQWSLAGVERLDHIGGQLLW- 73

Query: 61  FMEKYHGKI--KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
             + ++G +  +L+  S    ++F+ I+    +  K     R   +N    L    G  +
Sbjct: 74  --QAWNGALPQRLE-ASEGQRRVFARIAAVQDEGWKKHMVDR---FNPVTLL----GANV 123

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKF-----KGFLLSLIRQMYYVGVSGVPVVIL 173
           + F          LG  I+  G+      +F     +G    +   +Y VG   + +  L
Sbjct: 124 MSF-------GVQLGNGITMLGQLAFDLLRFARMPQRGPWREISANIYNVGYKALGITAL 176

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           + F+ G V++   A QL  FGA  F ++++ +  +RE+G +L A++IAGRSGSAI A+IG
Sbjct: 177 VGFLIGIVLSYLSANQLRTFGASTFIVNILGMAVIRELGPVLAAILIAGRSGSAITAQIG 236

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
            M++ EE+DA+R MG+     LI PR+ AL I++PLL    +  A+ G  +       I 
Sbjct: 237 VMRVTEELDAMRVMGISHGFRLIMPRVIALAIAMPLLVAWTDVMALAGGMLAARMQLGIS 296

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              F         +AN++ GL K       I + A   G  +  ++ SLG+  T  VV +
Sbjct: 297 ATFFLRELPDAVPVANLWLGLGKGVVFGILIALTACHFGLRIKPNTQSLGEGTTASVVTA 356

Query: 354 ISIVIIIDSLFAIFYFAIGI 373
           I+IVI+ D++FAI +  +G+
Sbjct: 357 ITIVILADAVFAILFKDVGL 376


>gi|242310202|ref|ZP_04809357.1| ABC transporter [Helicobacter pullorum MIT 98-5489]
 gi|239523499|gb|EEQ63365.1| ABC transporter [Helicobacter pullorum MIT 98-5489]
          Length = 365

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/292 (34%), Positives = 155/292 (53%), Gaps = 15/292 (5%)

Query: 94  KNQKPQRSFFYNSFKNL--HYHIGKKIVKFINDSC----SQAHILGLVISNTGE----FC 143
           +N K Q+ F   S K +  + ++ + I+K  +DS     +    L L +   GE    F 
Sbjct: 75  QNPKSQKIFKILSTKEIPSNTNLTQNIIKIHSDSFIIIKNNIKTLILSLGFLGEILYTFL 134

Query: 144 ASSYKFKGFLLSLIRQMYYVG---VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSI 200
           AS   FK   + L    Y++    +  V +V L  F+ G VIA QG+ QL QFGA I  +
Sbjct: 135 ASFINFKS--IRLKATFYFIQESLIKAVGIVALACFLIGIVIAYQGSIQLRQFGASILIV 192

Query: 201 DLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRI 260
           ++ S+L LRE+  ++TA++IAGRS SA  AEIG M+  +EIDA+R MG + +  L+ PR+
Sbjct: 193 EMSSMLTLREMAPIITAIIIAGRSASAFSAEIGMMRATQEIDAMRVMGFNPMTFLVVPRM 252

Query: 261 WALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320
            AL   LPL+  +A+   ++G+  V     DI    F  RF     + + + G+ KAPF 
Sbjct: 253 LALCCVLPLVVFIADLFGLVGSMFVCQIQLDISTEQFLERFLQMVDMRHFWVGIAKAPFF 312

Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
              I  +    GF+V   + S+G   T  VV+SI  VI  D++ ++ +  +G
Sbjct: 313 GLIISFIGCFHGFSVAKDTRSIGVHTTKSVVESIFFVIAFDAICSVIFTEMG 364


>gi|299068161|emb|CBJ39380.1| putative abc-type transport system, permease component abc
           transporter protein (resistance to organic solvents)
           [Ralstonia solanacearum CMR15]
          Length = 374

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 188/377 (49%), Gaps = 24/377 (6%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITE---IDTIGAELIMY 60
           +G +V   +G+W +  ++E A   V +  + I++     +   +TE   ID  GA+L+  
Sbjct: 15  DGRSVAYLSGDWTTLALAERAG--VRSARRQIRTGLNTANAWCLTEVGRIDHFGAQLLWR 72

Query: 61  -FMEKYHGKIKLQGVSTH-IEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNL--HYHIGK 116
            +  ++   +  +      I+++  L     +K+I  +    +   N+  +   H  IG 
Sbjct: 73  AWGNRWPELLDARPDQRRMIDRVARLDPGGWKKRIAPRINPVAVLGNAMLDFAEHLRIGV 132

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +V             G ++ +   F  + ++  G    +   +Y  G   + +  L+ F
Sbjct: 133 AMV-------------GQLVFDLLRFVRAPHR--GPWREISANIYSTGYKALGITALVGF 177

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
           + G V++   A QL  FGA IF ++++ +  +RE+G +L A+++AGRSGSAI A+IG M+
Sbjct: 178 LIGIVLSYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMR 237

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           + EE+DA+R MG+     LI P++ AL I++PLL    +  A+ G  +      DI    
Sbjct: 238 VTEELDAMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTY 297

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           F +       +AN++ G+ K       I + A   G  +  ++ SLG+  TT VV SI+I
Sbjct: 298 FITSLPDAVPVANLWLGIGKGVVFGMLIALAACHFGLRIQPNTQSLGEGTTTSVVVSITI 357

Query: 357 VIIIDSLFAIFYFAIGI 373
           VI+ D++FAI +  +GI
Sbjct: 358 VILADAVFAILFKDVGI 374


>gi|197120798|ref|YP_002132749.1| hypothetical protein AnaeK_0378 [Anaeromyxobacter sp. K]
 gi|196170647|gb|ACG71620.1| protein of unknown function DUF140 [Anaeromyxobacter sp. K]
          Length = 370

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 165/341 (48%), Gaps = 24/341 (7%)

Query: 41  IVDLSAITEIDTIGAELIMYF---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97
           ++D S +  +DT GA L+      +E+    + L     H E L +L++ +     +  +
Sbjct: 46  VIDASGVAAMDTAGAWLLRRAARDLERGGRPVTLTLRPEH-EALLALVTSSGEVAPRRAR 104

Query: 98  PQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFK-GFLLSL 156
            +  F           +G+        + S A  +G V++  GE      + + G L   
Sbjct: 105 ERARFLSE--------LGRS-------AWSSALAIGGVLTLVGELAGRVARARAGPLRVR 149

Query: 157 IRQ----MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
            RQ    +   G   +P   L+SF  G V+A QGA  L  FGA I   DL+ +  LRE+ 
Sbjct: 150 ARQAVLHVQSAGFEALPTTALLSFFVGVVLASQGATLLRPFGAGILIADLVGLAMLRELS 209

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            L+TA+++AGRSGSA  A+IG+MK+  EI+++R  G+  V  L+ PRI AL + +PLLT+
Sbjct: 210 PLVTAIVVAGRSGSAYAAQIGAMKMAGEIESLRAGGVSPVDALVVPRIAALALVVPLLTV 269

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
            A+   + GA++V      +    F  R       ++   G+ KAP     +  V   +G
Sbjct: 270 AADVLGLAGATLVARAELGMHAPEFLGRVAREVHASSYLLGVAKAPVFGVIVAAVGCHQG 329

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
                 + S+G++ T  VVQS+ +V++ D L  +    +GI
Sbjct: 330 LRASDDAGSVGRRTTGAVVQSMFLVVLADGLVLVVSRQLGI 370


>gi|28898136|ref|NP_797741.1| putative ABC transport system permease [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|153836560|ref|ZP_01989227.1| ABC-type transport system, permease component [Vibrio
           parahaemolyticus AQ3810]
 gi|260366435|ref|ZP_05778874.1| ABC transporter, permease protein [Vibrio parahaemolyticus K5030]
 gi|260878481|ref|ZP_05890836.1| ABC-type transport system, permease protein [Vibrio
           parahaemolyticus AN-5034]
 gi|260897062|ref|ZP_05905558.1| ABC transporter, permease protein [Vibrio parahaemolyticus
           Peru-466]
 gi|260901858|ref|ZP_05910253.1| ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037]
 gi|28806350|dbj|BAC59625.1| putative ABC transport system permease protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|149750158|gb|EDM60903.1| ABC-type transport system, permease component [Vibrio
           parahaemolyticus AQ3810]
 gi|308087695|gb|EFO37390.1| ABC transporter, permease protein [Vibrio parahaemolyticus
           Peru-466]
 gi|308091102|gb|EFO40797.1| ABC-type transport system, permease protein [Vibrio
           parahaemolyticus AN-5034]
 gi|308108149|gb|EFO45689.1| ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037]
 gi|308113110|gb|EFO50650.1| ABC transporter, permease protein [Vibrio parahaemolyticus K5030]
          Length = 357

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 188/356 (52%), Gaps = 28/356 (7%)

Query: 19  EISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH---GKIKLQGVS 75
           ++ E A+D++    +S      +V+ S +T +D  G   +     ++     +I + G+S
Sbjct: 21  DLWEKANDIL----ESYPDSPIVVNASNLTFVDISGVAFLSDLQTRFRPPGAEISIIGLS 76

Query: 76  THIEQLFSLISFTHRKKIKNQKPQRSFFY---NSFKNLHYHIGKKIVKFINDSCSQAHIL 132
             + +L    +  +  +I   + +  FF    N+ + +  ++G  +V+FI + C     L
Sbjct: 77  ASLAELVPPSNIENAPQIP--RGEDGFFERVGNATREMLVYVGS-VVRFIKE-CVLVFKL 132

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQM-YYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           G+             + K    + +  +    G   VP+++LI F+ G +IA +      
Sbjct: 133 GI------------NRRKNVNWTTVSNIATRAGADAVPIILLIGFLMGVIIAFEIGLVAQ 180

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           QFGA +F  D + I   RE+G L+TA++ AGR+G+A  AEIG+ K+NEEI+A+ T G+  
Sbjct: 181 QFGAVLFVADGIGISMFRELGPLMTAIVFAGRTGAAFAAEIGTQKVNEEINALHTFGICP 240

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PRI+A ++ LPLLT+LA+   ++G ++V+ K +DI F  ++ +  +  ++ ++F
Sbjct: 241 VEFLVIPRIYASVLVLPLLTVLADIIGVLGGALVLLK-FDISFVQYYHQLLNALSVWDLF 299

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            GLIKA      I ++  + G A G  S S+G   T+ VV SI  +++ID  F + 
Sbjct: 300 FGLIKATTFGFIIAVIGCERGLATGQGSTSVGLAATSAVVSSIIWIVVIDGFFTVL 355


>gi|254441414|ref|ZP_05054907.1| conserved domain protein [Octadecabacter antarcticus 307]
 gi|198251492|gb|EDY75807.1| conserved domain protein [Octadecabacter antarcticus 307]
          Length = 551

 Score =  134 bits (337), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 70/160 (43%), Positives = 105/160 (65%), Gaps = 2/160 (1%)

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           GL +S          +F+  L +L+     VG+  VP+V L++F+ G V+A QG+ QL Q
Sbjct: 44  GLFLSRLARSIRHPKEFR--LTALVHHCQEVGLKAVPIVALMAFLIGVVLAFQGSTQLKQ 101

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
           FGAE+F +DL+++  LRE+G+LLT++++AGR+ SA  A IGSMK+ EEIDA+R++GLD  
Sbjct: 102 FGAEVFVVDLIAVYILRELGILLTSIIVAGRTASAFTAAIGSMKMREEIDAMRSLGLDPA 161

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
            IL  PRI AL++ LP+L ++AN   + G  +      DI
Sbjct: 162 TILFVPRILALVLMLPILGLVANVMGLFGDPMAAQVPVDI 201


>gi|300705335|ref|YP_003746938.1| ABC transporter permease [Ralstonia solanacearum CFBP2957]
 gi|299072999|emb|CBJ44356.1| putative abc-type transport system, permease component abc
           transporter protein (resistance to organic solvents)
           [Ralstonia solanacearum CFBP2957]
          Length = 374

 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 184/373 (49%), Gaps = 16/373 (4%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITE---IDTIGAELIMY 60
           +G +V   +G+W +  ++E A   V    + I++     +   +TE   ID  GA+L+  
Sbjct: 15  DGRSVAYLSGDWTTLALAERAG--VRGARRQIRAGLDNANAWCLTEVGRIDHFGAQLLW- 71

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
              +  G    + +    +Q   +I    R      K   +   N    L    G  ++ 
Sbjct: 72  ---RAWGNRWPEHLDARADQ-RRMIDRVARLDPGGWKKHIAPRINPVTVL----GGAMLD 123

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           F +       ++G ++ +   F  + ++  G    +   +Y  G   + +  L+ F+ G 
Sbjct: 124 FADHLQIGVAMVGQLMFDLLRFVRAPHR--GPWREISANIYSTGYKALGITALVGFLIGI 181

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V++   A QL  FGA IF ++++ +  +RE+G +L A+++AGRSGSAI A+IG M++ EE
Sbjct: 182 VLSYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEE 241

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +DA+R MG+     LI P++ AL I++PLL    +  A+ G  +      DI    F + 
Sbjct: 242 LDAMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITS 301

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                 +AN++ G+ K       I +VA   G  +  ++ SLG+  TT VV SI+IVI+ 
Sbjct: 302 LPDAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIVILA 361

Query: 361 DSLFAIFYFAIGI 373
           D++FAI +  +GI
Sbjct: 362 DAVFAILFKDVGI 374


>gi|298530716|ref|ZP_07018118.1| protein of unknown function DUF140 [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298510090|gb|EFI33994.1| protein of unknown function DUF140 [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 256

 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 124/212 (58%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +QM ++GV+ + VV L S  TG V+A Q  +  S FGAE      +++   RE+G ++T 
Sbjct: 45  KQMEFIGVNSLFVVALTSLFTGMVLALQTFYAFSMFGAETLVGATVALSMTRELGPVITG 104

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +M+ GR+GSAI AEIG+M++ E++DA+  M ++ V+ L+ PRI A +I LPLLTI++N  
Sbjct: 105 LMVTGRAGSAICAEIGTMRVTEQVDALTVMAINPVQYLVLPRIVAGVIMLPLLTIISNTM 164

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            I+G  +V  +  DI   +F ++     T+A+++ GLIKA      + +V   +GF    
Sbjct: 165 GILGGYLVGVQLLDIHGGMFLNKIQEHVTMADVYNGLIKASAFGGILTLVGCYKGFYTRG 224

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
            +  +G+  T  VV S  ++++ D       F
Sbjct: 225 GAEGVGRSTTQAVVMSSVLILVSDYFLTALMF 256


>gi|239907930|ref|YP_002954671.1| putative ABC transporter permease protein [Desulfovibrio magneticus
           RS-1]
 gi|239797796|dbj|BAH76785.1| putative ABC transporter permease protein [Desulfovibrio magneticus
           RS-1]
          Length = 384

 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 179/379 (47%), Gaps = 18/379 (4%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTI---GAEL 57
           ++  G+    F+G+W+  +     + V  A+  S      ++    +T  D++       
Sbjct: 18  VASGGVVTLTFSGSWRMDQTLPDIEAVRQALAASPAPQKLVLAGEGVTGWDSLFLTQCRA 77

Query: 58  IMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIG-- 115
           I+    +    +    +   +E L +L +    ++   +  +R+ F     ++ Y     
Sbjct: 78  IIALARERGVAVDAGALPPGVESLLALAAKVPERQGAARAAKRTPFLERMADMGYGAAQG 137

Query: 116 -KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
            + ++ F  D    A  L   ++    F  S       L +LI   Y   +  + +V LI
Sbjct: 138 VRNLLDFTGDVTLAAWAL---VTGRAVFQRSQ------LTTLI---YQASIDALGIVSLI 185

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           SF+ G ++A  GA QLSQFGA+I+   ++ I  +R +G ++T +++AGR+G+A  AE+G+
Sbjct: 186 SFLVGLILAFVGAIQLSQFGAQIYVSTIVGIAMVRVMGAIMTGIIMAGRTGAAYAAELGT 245

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           M++NEEIDA+RT G    + L+ PR+ AL++ +PLL I A+   I+G  +V      I  
Sbjct: 246 MQVNEEIDALRTFGFSPTQFLVLPRMIALVLMMPLLCIYADLMGIMGGFVVGVFMLKINP 305

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
             + +    +  LAN + GL+ +      + +     G   G  +  +G+  T  VV SI
Sbjct: 306 IQYLTHTWQSVPLANFWIGLVHSTVFGVLVAMAGCYRGMRCGRSALGVGQATTAAVVTSI 365

Query: 355 SIVIIIDSLFAIFYFAIGI 373
             ++I  ++  +    IG+
Sbjct: 366 LAIVIATAILTVCCNIIGV 384


>gi|17545032|ref|NP_518434.1| hypothetical protein RSc0313 [Ralstonia solanacearum GMI1000]
 gi|17427322|emb|CAD13841.1| putative abc-type transport system involved in resistance to
           organic solvents, permease component abc transporter
           protein [Ralstonia solanacearum GMI1000]
          Length = 374

 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 188/377 (49%), Gaps = 24/377 (6%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITE---IDTIGAELIMY 60
           +G +V   +G+W +  ++E A   V +  + I++     +   +TE   ID  GA+L+  
Sbjct: 15  DGRSVAYLSGDWTTLALAERAG--VRSARRQIRAGLNTANAWCLTEVGRIDHFGAQLLWR 72

Query: 61  -FMEKYHGKIKLQGVSTH-IEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNL--HYHIGK 116
            +  ++   +  +      I+++  L     +K+I  +    +   N+  +   H  IG 
Sbjct: 73  AWGNRWPELLDARPDQRRMIDRVARLDPGGWKKRIAPRINPVTVLGNAMLDFARHLRIGV 132

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +V             G ++ +   F  + ++  G    +   +Y  G   + +  L+ F
Sbjct: 133 AMV-------------GQLMFDLLRFVRAPHR--GPWREISANIYSTGYKALGITALVGF 177

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
           + G V++   A QL  FGA IF ++++ +  +RE+G +L A+++AGRSGSAI A+IG M+
Sbjct: 178 LIGIVLSYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMR 237

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           + EE+DA+R MG+     LI P++ AL I++PLL    +  A+ G  +      DI    
Sbjct: 238 VTEELDAMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALGGGILAARFQLDISPTY 297

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           F +       +AN++ G+ K       I + A   G  +  ++ SLG+  TT VV SI+I
Sbjct: 298 FITSLPDAVPVANLWLGIGKGVVFGMLIALTACHFGLRIQPNTQSLGEGTTTSVVVSITI 357

Query: 357 VIIIDSLFAIFYFAIGI 373
           VI+ D++FAI +  +GI
Sbjct: 358 VILADAVFAILFKDVGI 374


>gi|300692713|ref|YP_003753708.1| abc-type transport system, permease abc transporter protein
           (resistance to organic solvents) [Ralstonia solanacearum
           PSI07]
 gi|299079773|emb|CBJ52450.1| putative abc-type transport system, permease component abc
           transporter protein (resistance to organic solvents)
           [Ralstonia solanacearum PSI07]
          Length = 374

 Score =  133 bits (335), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 188/375 (50%), Gaps = 20/375 (5%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITE---IDTIGAELIMY 60
           +G +V   +G+W +  ++E A   V +  + I++     +   +TE   ID  GA+L+  
Sbjct: 15  DGRSVAYLSGDWTTLALAERAG--VRSARRQIRAGLNNANAWCLTEVGRIDHFGAQLLWR 72

Query: 61  -FMEKYHGKIKLQGVSTH-IEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            +  ++  ++  +      I+++  L     +K+I  +            N    +G  +
Sbjct: 73  AWGNRWPERLDARPDQRRMIDRVARLDPGGWKKRIAPRI-----------NPVMVLGGAM 121

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
             F         ++G ++ +   F  + ++  G    +   +Y  G   + +  L+ F+ 
Sbjct: 122 FDFAGHLQIGVAMVGQLMFDLLRFVRAPHR--GPWREISANIYSTGYKALGITALVGFLI 179

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G V++   A QL  FGA IF ++++ +  +RE+G +L A+++AGRSGSAI A+IG M++ 
Sbjct: 180 GIVLSYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVT 239

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE+DA+R MG+     LI P++ AL I++PLL    +  A+ G  +      DI    F 
Sbjct: 240 EELDAMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFI 299

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +       +AN++ G+ K       I +VA   G  +  ++ SLG+  TT VV SI+IVI
Sbjct: 300 TSLPDAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIVI 359

Query: 359 IIDSLFAIFYFAIGI 373
           + D++FAI +  +GI
Sbjct: 360 LADAVFAILFKDVGI 374


>gi|114563133|ref|YP_750646.1| hypothetical protein Sfri_1962 [Shewanella frigidimarina NCIMB 400]
 gi|114334426|gb|ABI71808.1| protein of unknown function DUF140 [Shewanella frigidimarina NCIMB
           400]
          Length = 370

 Score =  133 bits (335), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 125/210 (59%), Gaps = 1/210 (0%)

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G  G+ +V LIS + G ++A  G+ QL Q GA+++  +L++I  +RE+G L+T V++AGR
Sbjct: 162 GPKGLAIVTLISLLVGMILAYLGSVQLRQLGAQVYVANLVAIGMVREMGALMTGVIMAGR 221

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           +G+A  A++G+M++NEEIDA+R MG+  +  L+ PR+ ALI  +PL+ I ++   ++G +
Sbjct: 222 TGAAYAAQLGTMQVNEEIDALRVMGIPTMEFLVLPRLLALIFIMPLMCIYSDVIGMLGGA 281

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           +V      + +  +  +        +I TGLIK+      I I   + G   G  SN++G
Sbjct: 282 LVA-NGMGVSYTQYILQTQVAIDWVDISTGLIKSLIFGFLIAIAGCQAGLLCGRDSNAVG 340

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
              T  VV++I  +++ D+   I Y  +GI
Sbjct: 341 LATTHAVVKAIVFLVVADAALNILYDKLGI 370


>gi|303247224|ref|ZP_07333498.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans
           JJ]
 gi|302491383|gb|EFL51271.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans
           JJ]
          Length = 368

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 176/364 (48%), Gaps = 27/364 (7%)

Query: 1   MSE-NGITVFRFAGNWK----SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDT--I 53
           M+E +G+    F+G W+    SP++S I      A+ KS    +   + + +T+ D+  +
Sbjct: 1   MAESDGVLTLTFSGTWRIDRPSPDLSPIR----AALGKSPAPKTLAFESAKVTDWDSRFL 56

Query: 54  GAELIMYFMEKYHG-KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHY 112
                +  + K HG    L G+    + L  L      ++   +K   + F     ++ +
Sbjct: 57  TQCRAILALAKAHGVTPDLSGLPAGAKSLLELAEKVPERQGAARKEASTPFLTRVADMAF 116

Query: 113 HIGK---KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
              +    ++ F+ D       L         F  S+      L +LI   Y  GV  +P
Sbjct: 117 GAWQGVHNLLDFVGDVTLACLALA---GGRAVFQRSN------LFALI---YQAGVEALP 164

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +V LIS + G ++A  GA QLSQFGA+I+   ++ I  +R +G ++T +++AGR+G+A  
Sbjct: 165 IVSLISLLVGLILAFVGAIQLSQFGAQIYVSTIVGIAMVRVMGAIMTGIIMAGRTGAAYA 224

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AE+G+M++NEEIDA+RT G    + L+ PR+ AL++ +PLL I A+   I+G  IV    
Sbjct: 225 AELGTMQVNEEIDALRTFGFSPTQFLVLPRMIALVLMMPLLCIYADIMGILGGFIVGVFM 284

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
             I    + +    +  LAN + GL+ +      + +     G   G  + ++G+  T  
Sbjct: 285 LKINPIQYLTHTWQSVPLANFWIGLVHSTVFGVLVAMAGCYRGMRCGRSALAVGQATTAA 344

Query: 350 VVQS 353
           VV S
Sbjct: 345 VVTS 348


>gi|56710306|dbj|BAD81021.1| permease component of ABC-type transport system [uncultured
           bacterium]
          Length = 405

 Score =  132 bits (333), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 172/370 (46%), Gaps = 31/370 (8%)

Query: 8   VFRFAGNWK----SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY--- 60
           V   +G W+    +P  + +A+  + A   + Q+    VD +A+   D+    L+++   
Sbjct: 43  VVALSGAWQLGRPAPRFAPLAESALSAGTGATQTARVTVDAAALGSWDS---SLLIFLRQ 99

Query: 61  ---FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
              F E +        +   I  L +L      + +  + P           L   +G  
Sbjct: 100 GQEFCEAHKLDFVTDALPDRITSLLALARAVPERAVDAEVPA--------LPLRARVGLA 151

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV----GVSGVPVVIL 173
            V   + S +    LG V+         +   +G +    R+ + V    G   +P+V L
Sbjct: 152 GVSAWDASMAAVTFLGEVLQR------GALLLRGRVRMRWREFWVVVQSNGSGALPIVTL 205

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           I+ + G +IA  G   L +FGA  ++  L+    LRE+G L+T ++IAGR+G+A  AE+G
Sbjct: 206 IALLVGVIIAFLGVVVLKRFGAGYYASYLVGFGMLREMGALMTGIIIAGRTGAAFAAELG 265

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           SMKI EEIDA+ T+G+  V  L+ PR+  L + +PLL + A+   I+G   V     D+ 
Sbjct: 266 SMKITEEIDALTTLGISPVDHLVLPRVLGLFVMMPLLVVYADLVGIVGGMGVAVAMLDVT 325

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              F +   +   L++   G+ K       IG+    +G   G  + ++G+  T+ VV S
Sbjct: 326 PTQFMNGLLTAVVLSDALLGVFKGLIFGAIIGLAGCMKGLQAGSDAGAVGRAATSAVVIS 385

Query: 354 ISIVIIIDSL 363
           I++VI+ +++
Sbjct: 386 ITLVILANAV 395


>gi|317401487|gb|EFV82119.1| integral membrane protein [Achromobacter xylosoxidans C54]
          Length = 377

 Score =  132 bits (332), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 186/368 (50%), Gaps = 13/368 (3%)

Query: 8   VFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-FMEKY 65
           V    G+W    ++E  + +   A         A  DL  I+ +DTIGA LI   + EK 
Sbjct: 21  VCHVGGDWSVLALAEPGEVERRRAAMAKATDAGARWDLQGISRLDTIGALLIWQAWGEKL 80

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
             +++    S   + +F+ ++     K    +P+ ++ +         +G  +++   + 
Sbjct: 81  PERVRW---SAGQQDVFTALATNKGGKQALPRPEPAWGW------LRALGGAVLQAGENG 131

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            +   +LG ++ +   F   S   +G    +  Q+Y  G   + +  L+ F+ G V++  
Sbjct: 132 RALLTMLGQLVLDL--FGMLSRPSRGPWREISAQVYRTGAQALGITALVGFLIGVVLSYL 189

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            A QL   GA+ F + L+ +  +RE+G +L A+++AGRSGSAI A+IG M++ +E+DA+ 
Sbjct: 190 SAQQLQMIGADRFIVRLLGVSIVRELGPVLAAILVAGRSGSAITAQIGVMRVTQELDAML 249

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MG+   + LI PR+ AL +++PLL +  +  AI+G  +       +    F        
Sbjct: 250 VMGISHGQRLILPRVVALAVTMPLLVLWTDAMAILGGMLAAQVQLGVSAQWFLQSLPDAI 309

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           +L N + G++K       I ++A   G  +  ++ SLG+  TT VV SI+ VI++D+L+A
Sbjct: 310 SLTNYWIGILKGVTFGILIALIACHFGLRIQPNTESLGRGTTTSVVTSITGVILLDALYA 369

Query: 366 IFYFAIGI 373
           + + ++GI
Sbjct: 370 VIFSSVGI 377


>gi|82703102|ref|YP_412668.1| hypothetical protein Nmul_A1981 [Nitrosospira multiformis ATCC
           25196]
 gi|82411167|gb|ABB75276.1| Protein of unknown function DUF140 [Nitrosospira multiformis ATCC
           25196]
          Length = 378

 Score =  132 bits (332), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 128/215 (59%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
            +Y  G   + +  L+ F+ G V++   + QL  FGA +F ++++ I  +RE+G +L A+
Sbjct: 163 NLYRTGAQALGITALVGFLIGVVLSYLSSRQLQIFGAHVFIVNILGISVIRELGPMLAAI 222

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++AGRSGS++ A++G M++ EE+DA+  MG+     LI P++ AL +++PL+ +  +  A
Sbjct: 223 LVAGRSGSSMTAQLGVMRVTEELDALTVMGIPHSLRLILPKVIALGLAMPLVVLWTSAVA 282

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           +IG   V      + +  F SR      ++N++ GL K      AI +++   G  +  +
Sbjct: 283 LIGGMTVAELQLGLGYKFFLSRLPDAVAVSNLWLGLGKGIVCGMAIALISCHFGLRIKSN 342

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           + SLG+  T  VV SI++VIIID++FA+ +  +G+
Sbjct: 343 TESLGEGTTNSVVTSITVVIIIDAIFAVIFSDVGL 377


>gi|242277489|ref|YP_002989618.1| hypothetical protein Desal_0007 [Desulfovibrio salexigens DSM 2638]
 gi|242120383|gb|ACS78079.1| protein of unknown function DUF140 [Desulfovibrio salexigens DSM
           2638]
          Length = 249

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/214 (36%), Positives = 124/214 (57%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LIR +  VG   +P+V +IS  TG ++A Q A QL + GA  +  +L+ +  +RE+G LL
Sbjct: 33  LIRDLASVGADSIPIVSVISACTGIILALQSAQQLEKVGAISYVANLVGVTIIRELGPLL 92

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA+++ GRSG+A  AEI +M+I+EEIDA+  MG++ VR L+ P++ A++I +P LT+ A+
Sbjct: 93  TAIIVTGRSGAAFTAEIATMQISEEIDALEVMGIEPVRFLVVPKMIAMLIMVPCLTVWAD 152

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
           F  I            I    +F+       L ++  GL+KA   A AI ++   +GF  
Sbjct: 153 FVGIFSGGAFSAIALGINEVTYFNNSVEFLKLHDVLAGLVKAGGFAVAITLIGCWQGFLA 212

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              +  +G+K T  VV SI ++I++D  F    F
Sbjct: 213 REGAADVGRKTTNSVVISIFMIILLDLFFTALNF 246


>gi|134297087|ref|YP_001120822.1| hypothetical protein Bcep1808_2996 [Burkholderia vietnamiensis G4]
 gi|134140244|gb|ABO55987.1| protein of unknown function DUF140 [Burkholderia vietnamiensis G4]
          Length = 374

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 186/388 (47%), Gaps = 44/388 (11%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            E G TV R  G W +  ++     +   +     +     DLS I  +D +G + +   
Sbjct: 14  GEQGQTV-RLYGQWTALALARNRGAITRRVAGLASARPREWDLSGIERLDHVGGQALW-- 70

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
             +  G+    GV     Q  ++     R   + + P+R                 +V+F
Sbjct: 71  --RVWGRKLPAGVELSDTQR-TIFERIERLDSQREAPER-----------------VVRF 110

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFL----LSLIRQ------------MYYVGV 165
             D  ++   LGL I   GE         G +    LS++R+            +Y  G 
Sbjct: 111 --DPVTR---LGLAIFTFGEHLQGGIAMFGRVILDALSVLRRPQTMPWKETSANIYSAGA 165

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             +P+  L++F+ G V++   A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSG
Sbjct: 166 QALPITALVAFLIGIVLSYLSAQQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSG 225

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           SAI A IG M++ EE+DA+R MG+     L+ PR+ AL +++PLL +  N  A+ G ++ 
Sbjct: 226 SAITARIGVMRVTEELDAMRVMGIPHGLRLVLPRVLALGVAMPLLVMWTNIIALTGGALA 285

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                 I F  F         +AN++ G+ K       I +VA   GF +  +S SLG+ 
Sbjct: 286 AKFVLAIDFNYFVRSLPGVVPIANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEG 345

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAIGI 373
            TT VV SI++VI+ D++FAI +  +G+
Sbjct: 346 TTTSVVTSITVVILADAVFAILFQNVGL 373


>gi|88706598|ref|ZP_01104301.1| conserved hypothetical protein, membrane (DUF140) [Congregibacter
           litoralis KT71]
 gi|88699094|gb|EAQ96210.1| conserved hypothetical protein, membrane (DUF140) [Congregibacter
           litoralis KT71]
          Length = 370

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 174/359 (48%), Gaps = 20/359 (5%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDT---IGAELIMYFMEKY 65
            + +G+W S E+  +   V +        DS  VD+S +++ D     G   +    +  
Sbjct: 16  LQISGDWTSAELPAL---VPLFTTLLETRDSPAVDVSEVSDWDPRLEAGLLRLQRLAQAK 72

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
              I+  G      QL +L +     +         F     +     IG  ++    DS
Sbjct: 73  ARDIRYLGAPDSQTQLMNLATAVAPYEAPAASATGFFSTKQLRRSLADIGDDLL----DS 128

Query: 126 CSQAHILGLVI--SNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                 +G+ +  + TG    S  + + F+ SL +     G   + ++ L S + G ++A
Sbjct: 129 LEFLGGVGIALWRTLTGR---SGMRRREFVESLAQ----AGPQAIGIITLTSILVGMILA 181

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
             GA QL QFGA +F  DL++I  LRE+G L+TAV++AGR+G+A  A++ +M+ NEEIDA
Sbjct: 182 YLGAAQLQQFGAAVFVADLVAIGMLREMGALMTAVVMAGRTGAAYAAQLSTMQTNEEIDA 241

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           I T+G+D +  L++PR+ AL + +PLL + A+   ++G ++V       P   + S+  +
Sbjct: 242 ISTLGIDPMEFLVAPRVLALFLMMPLLVVYADALGVLGGAVVAGGMGVTPLQ-YISQLSA 300

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
             T  + F G+ K    A  I     + G   G +S ++G+  T  VV ++  +I+ D+
Sbjct: 301 AITPTHFFVGIFKGFVFAALIATAGCRAGMNAGRNSEAVGQATTEAVVTAVVYLIVADA 359


>gi|237749352|ref|ZP_04579832.1| ABC transport system permease [Oxalobacter formigenes OXCC13]
 gi|229380714|gb|EEO30805.1| ABC transport system permease [Oxalobacter formigenes OXCC13]
          Length = 374

 Score =  130 bits (328), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/336 (26%), Positives = 174/336 (51%), Gaps = 19/336 (5%)

Query: 41  IVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQ--LFSLISFTHRKKIKNQKP 98
           + DL+ I E+D I A+    F+ +  G+ +   ++   EQ   F+ +    + K+ +   
Sbjct: 53  VWDLTRIRELDYISAQ----FLWESWGEKRPANLALTEEQGRFFARLEQAGQLKLPDTTK 108

Query: 99  QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158
              + +  F+N+ + + +     +        ++G ++ +   F  +  +  G    +  
Sbjct: 109 PFLWPWQRFRNIVHKVSEHFSGMV-------ALVGQLMIDIVNFAKAPRR--GPWTEISA 159

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
            +Y+ G   + +  ++ F+ G V++   A QL  FG ++F ++L+ I  LRE+G LL A+
Sbjct: 160 NIYHAGAQALGITAVVGFLIGVVLSYLSAQQLHMFGGDVFLVNLLGISVLRELGPLLAAI 219

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++AGRSGS++ A++G M++ EE+ A++ MGL     LI P++ AL I +PLL I  +  A
Sbjct: 220 LVAGRSGSSMTAQLGVMRVTEELSAMQVMGLPQGFRLIMPKVIALSIVMPLLVIWTDVIA 279

Query: 279 IIGASIVIWKYYDIPFAV--FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           ++G  +     Y+I  ++  F +       +AN + G+ K       I ++A   G  + 
Sbjct: 280 LLGGMLA--GSYEIGLSMSYFLASLPDAVPIANFWIGVGKGYVFGILIALIACYYGLKIK 337

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
            ++ SLG+  T  VV SI++VI+ D++FAI    +G
Sbjct: 338 PNTESLGEGTTRSVVTSITVVILADAIFAIVLQGVG 373


>gi|283853770|ref|ZP_06370995.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B]
 gi|283570832|gb|EFC18867.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B]
          Length = 385

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 168/355 (47%), Gaps = 20/355 (5%)

Query: 4   NGITVFRFAGNWKS----PEISEIADDVVMAINKSIQSDSAIVDLSAITEIDT---IGAE 56
           NGI     +G W+     P ++ + D    A+  S      +   +A+T  D+       
Sbjct: 22  NGILTLTLSGVWRLDRPFPPLAPVKD----ALATSPAPRKLVFAATAVTGWDSRFLADCR 77

Query: 57  LIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116
            ++    +   ++++ G+      L  L +    ++   +K   + F  S  +L     +
Sbjct: 78  AVLVLARERGVEVEVSGLPEGAASLLDLAAKVPERQGAARKTSHAAFLESMGDLGLGFAQ 137

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +V  +         LG V             F+    +L+  +Y  GV  +P+V LIS 
Sbjct: 138 GVVNLL-------EFLGEVTLACLALLRGRAVFQRS--NLVTLIYQAGVEALPIVSLISL 188

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
           + G ++A  GA QLSQFGA+I+   ++ I  +R +G ++T +++AGR+G+A  AE+G+M+
Sbjct: 189 LVGLILAFVGAIQLSQFGAQIYVSTIVGIAMVRVMGAIMTGIIMAGRTGAAYAAELGTMQ 248

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           +NEEIDA++T G    + L+ PR+ AL++ LPLL + A+   I+G  IV      I    
Sbjct: 249 VNEEIDALKTFGFSPTQFLVLPRMIALVLMLPLLCVYADLMGILGGFIVGVFMLHINPIQ 308

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
           + +    +  LAN + GL+ +      + +     G   G  + ++G+  T+ VV
Sbjct: 309 YLTHTWQSVPLANFWIGLVHSTVFGVLVAMAGCYRGMRCGRSALAVGQAATSAVV 363


>gi|83814459|ref|YP_444490.1| ABC transporter, permease [Salinibacter ruber DSM 13855]
 gi|83755853|gb|ABC43966.1| ABC transporter, permease [Salinibacter ruber DSM 13855]
          Length = 371

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 92/361 (25%), Positives = 175/361 (48%), Gaps = 27/361 (7%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIV--DLSAITEIDTIGAELIMYFME-----KY 65
           G+W       + D   + +N +  S  A V  D S + + D+    L+ +  E     + 
Sbjct: 18  GDWTLDR--PLPDARAVMVNAAPSSPVAAVAFDTSGLGDWDS---SLVTFLFEAAEYGRA 72

Query: 66  HG-KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFF--YNSFKNLHYHIGKKIVKFI 122
           H   +++  + T +E+L +L           +    +       +    Y     +V F+
Sbjct: 73  HDLDVRIDTLPTSLERLVALSQAVPEADTTPEAADTALLARLGHWGLAAYDEAHALVTFL 132

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
             +      +G +++  G       +++ F ++L         S +P+V +IS + G ++
Sbjct: 133 GQAVRS---VGAILTGRGRM-----RWRTFGVALQEST----ASALPIVTVISLLVGLIV 180

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A  GA  L +FGA+ F   L+S   LRE+G L+TA+++ GR+G+A  AE+GSM++NEEID
Sbjct: 181 AFLGAVVLQRFGADYFVSYLVSYGMLRELGALMTAIIMTGRTGAAFAAELGSMQVNEEID 240

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+ T G+  +  L++PRI A++++LP+LT+ A+   I+G   V     D+    F +   
Sbjct: 241 ALETFGISPIDFLVTPRILAVVLALPMLTLYADALGIVGGMGVAVTMLDLTTTQFLTGLL 300

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L++   G+ KA      IG+     G   G  ++++G+  T+ VV  I +++  ++
Sbjct: 301 EPVVLSDALVGIFKAVVYGGIIGLAGCMRGLQAGDDASAVGQATTSAVVTGILLIVFANA 360

Query: 363 L 363
           +
Sbjct: 361 I 361


>gi|33599154|ref|NP_886714.1| putative integral membrane protein [Bordetella bronchiseptica RB50]
 gi|33575200|emb|CAE30663.1| putative integral membrane protein [Bordetella bronchiseptica RB50]
          Length = 378

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 169/333 (50%), Gaps = 14/333 (4%)

Query: 43  DLSAITEIDTIGAELIM-YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP-QR 100
           DL  +  +DTIGA L+   + ++   +++    S    ++F  +     + +    P  R
Sbjct: 58  DLRGVERLDTIGAHLLWGAWGQQLPERVRW---SDGQREVFQTLQRNRGEALPAPAPADR 114

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
             +  +  +  +  G+     I        + G ++ + G F       +G    +  Q+
Sbjct: 115 WGWLRAIGDAVFDAGRNGRALII-------MFGQLVLDLGAFL--RRPSRGPWREISAQV 165

Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
           Y  G   + +  L+ F+ G V++   A QL  FGA+ F + L+ +  +RE+G +L A+++
Sbjct: 166 YRTGAQALGITALVGFLIGVVLSYLSAQQLQMFGADRFIVRLLGVSIVRELGPVLAAILV 225

Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280
           AGRSGSAI A+IG M++ +E+DA+  MG+   + LI PR+ AL I++PLL +  +  A++
Sbjct: 226 AGRSGSAITAQIGVMRVTQELDAMLVMGISHGQRLILPRVIALAITMPLLVVWTDAMALL 285

Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
           G  +       +    F +      +L N + G+ K       I +VA   G  +  ++ 
Sbjct: 286 GGMLAAQMQLGVSAQWFLTSLPDAISLTNYWIGMFKGVSFGVLIALVACHFGLCIQPNTE 345

Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           SLG+  TT VV SI+ VI++D+L+A+ + +IGI
Sbjct: 346 SLGRGTTTSVVTSITGVILVDALYAVIFSSIGI 378


>gi|313672871|ref|YP_004050982.1| hypothetical protein Calni_0908 [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312939627|gb|ADR18819.1| protein of unknown function DUF140 [Calditerrivibrio nitroreducens
           DSM 19672]
          Length = 256

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 124/214 (57%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+QM ++G + + V+IL    TG V A Q      +FGAE     ++ +   RE+G +L
Sbjct: 43  LIKQMEFIGANSISVIILTGTFTGMVFAFQSYIGFHKFGAEYMVGTVVGLGMARELGPVL 102

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           +A+M+A R+GSAI AEIG+MK+ E+IDA+ ++ +D V+ L++PRI A ++ +PLL  +A 
Sbjct: 103 SAIMVAARAGSAITAEIGTMKVTEQIDALHSLAVDPVQYLVTPRILAGLLVMPLLNSIAV 162

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
           F  ++G   V  K  DI   ++    +    L++++ G+IK+      + +V   +G AV
Sbjct: 163 FCGVLGGYFVGVKILDINRTLYLQYMYQYVDLSDLYNGMIKSVVFGLILTLVGCYKGMAV 222

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              +  +G+  T  VV S  ++++ D +   F F
Sbjct: 223 SGGAEGVGRATTESVVLSCILILVFDYILTAFMF 256


>gi|325982943|ref|YP_004295345.1| hypothetical protein NAL212_2362 [Nitrosomonas sp. AL212]
 gi|325532462|gb|ADZ27183.1| protein of unknown function DUF140 [Nitrosomonas sp. AL212]
          Length = 370

 Score =  129 bits (325), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 179/345 (51%), Gaps = 15/345 (4%)

Query: 31  INKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISF--T 88
           +++  ++ +   DL+ I +IDT G  ++++ + K     +LQ    H E++F  +    T
Sbjct: 38  LSREARNQNLYWDLTGIGQIDTAGT-ILLWRVWKTKRPDRLQLRPEH-EKMFQRLERLPT 95

Query: 89  HRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYK 148
           H+  IK+    R   +         +GK ++     S     ++G ++ +          
Sbjct: 96  HQSGIKH----RDLLWPITT-----LGKLVLVLWQHSVGLITLIGQLMLDVIYLIRHPVY 146

Query: 149 FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL 208
                +S    +Y  G   + +  L+ F+ G V++   + QL  FGA+IF I+++ I  +
Sbjct: 147 IPWREIS--ANLYRTGAQALGITALVGFLIGIVLSYLSSKQLQLFGADIFIINILGISII 204

Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268
           RE+G +L A+++AGRSGSA+ A++G M++ +E+DA+  MG+   + LI P++  L I++P
Sbjct: 205 RELGPMLAAILVAGRSGSAMTAQLGVMRVTQELDALTVMGISHSQRLILPKVLGLGIAMP 264

Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328
           LL +  +  A++G  +       + +  F +    +  + N++ GL K       I ++A
Sbjct: 265 LLVMWTSAVALLGGMVAAEIQLGLHYHYFITALPDSVPVGNLWLGLGKGIVCGMVIALIA 324

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
              G  +  ++ SLG+  T  VV +I++VIIID++FA+ +  +G+
Sbjct: 325 CHFGLKIKPNTESLGEGTTASVVTAITMVIIIDAIFAVLFSDVGL 369


>gi|281356107|ref|ZP_06242600.1| protein of unknown function DUF140 [Victivallis vadensis ATCC
           BAA-548]
 gi|281317476|gb|EFB01497.1| protein of unknown function DUF140 [Victivallis vadensis ATCC
           BAA-548]
          Length = 263

 Score =  129 bits (325), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 124/222 (55%), Gaps = 3/222 (1%)

Query: 154 LSLIRQMYYVGVSG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210
           L L   +YY+ + G   +P+V+LI F+ G V+A  G  QLS+FG+EIF +D++    L+E
Sbjct: 41  LRLKETLYYLDLCGAQSLPLVLLICFLMGGVLAINGQIQLSKFGSEIFIVDMVGFSVLKE 100

Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
            G L+ A++  G++GSA  +EIG+MK++EEI A+ T+G+     L+ P++ A++I+LPLL
Sbjct: 101 FGPLMVALIATGQAGSAFASEIGTMKVDEEISALETLGIRPAAYLVLPKLIAMLIALPLL 160

Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330
           T+  +F+ + G   V      +P A +  R            G++K+   A  I +    
Sbjct: 161 TVFGDFAGLTGGLAVGITVAGLPLAAYVERTLDILDSTTFLLGVLKSFVFAVLITLAGCY 220

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
            GF     +  +G+  T  VV SI  V++  +L  + Y  IG
Sbjct: 221 CGFRSSGDAQGVGRAATAAVVISILFVVVATALLTVLYSFIG 262


>gi|294506238|ref|YP_003570296.1| ABC transporter permease [Salinibacter ruber M8]
 gi|294342566|emb|CBH23344.1| ABC transporter, permease [Salinibacter ruber M8]
          Length = 371

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 172/356 (48%), Gaps = 27/356 (7%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIV--DLSAITEIDTIGAELIMYFME-----KY 65
           G+W       + D   + +N +  S  A V  D S + + D+    L+ +  E     + 
Sbjct: 18  GDWTLDR--PLPDARAVMVNAAPSSPVAAVAFDTSGLGDWDS---SLVTFLFEAAEYGRA 72

Query: 66  HG-KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFF--YNSFKNLHYHIGKKIVKFI 122
           H   +++  + T +E+L +L           +    +       +    Y     +V F+
Sbjct: 73  HDLDVRIDTLPTSLERLVALSQAVPEADTTPEAEDTALLARLGHWGLAAYDEAHALVTFL 132

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
             +      +G +++  G       +++ F ++L         S +P+V +IS + G ++
Sbjct: 133 GQAVRS---VGAILTGRGRM-----RWRTFGVALQEST----ASALPIVTVISLLVGLIV 180

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A  GA  L +FGA+ F   L+S   LRE+G L+TA+++ GR+G+A  AE+GSM++NEEID
Sbjct: 181 AFLGAVVLQRFGADYFVSYLVSYGMLRELGALMTAIIMTGRTGAAFAAELGSMQVNEEID 240

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+ T G+  +  L++PRI A++++LP+LT+ A+   I+G   V     D+    F +   
Sbjct: 241 ALETFGISPIDFLVTPRILAVVLALPMLTLYADALGIVGGMGVAVTMLDLTTTQFLTGLL 300

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
               L++   G+ KA      IG+     G   G  ++++G+  T+ VV  I +++
Sbjct: 301 EPVVLSDALVGIFKAVVYGGIIGLAGCMRGLQAGDDASAVGQATTSAVVTGILLIV 356


>gi|33591357|ref|NP_879001.1| putative integral membrane protein [Bordetella pertussis Tohama I]
 gi|33570999|emb|CAE40477.1| putative integral membrane protein [Bordetella pertussis Tohama I]
          Length = 376

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 168/332 (50%), Gaps = 12/332 (3%)

Query: 43  DLSAITEIDTIGAELIM-YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
           DL  +  +DTIGA L+   + ++   +++    S    ++F  +     + +    P   
Sbjct: 56  DLRGVERLDTIGAHLLWGAWGQQLPERVRW---SDGQREVFQTLQRNRGEALPAPAPADR 112

Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY 161
           + +         IG  +     +  +   + G ++ + G F       +G    +  Q+Y
Sbjct: 113 WGW------LRAIGDAVFDAGRNGRALVIMFGQLVLDLGAFL--RRPSRGPWREISAQVY 164

Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221
             G   + +  L+ F+ G V++   A QL  FGA+ F + L+ +  +RE+G +L A+++A
Sbjct: 165 RTGAQALGITALVGFLIGVVLSYLSAQQLQMFGADRFIVRLLGVSIVRELGPVLAAILVA 224

Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281
           GRSGSAI A+IG M++ +E+DA+  MG+   + LI PR+ AL I++PLL +  +  A++G
Sbjct: 225 GRSGSAITAQIGVMRVTQELDAMLVMGISHGQRLILPRVIALAITMPLLVVWTDAMALLG 284

Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341
             +       +    F +      +L N + G+ K       I +VA   G  +  ++ S
Sbjct: 285 GMLAAQMQLGVSAQWFLTSLPDAISLTNYWIGMFKGVSFGILIALVACHFGLCIQPNTES 344

Query: 342 LGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           LG+  TT VV SI+ VI++D+L+A+ + +IGI
Sbjct: 345 LGRGTTTSVVTSITGVILVDALYAVIFSSIGI 376


>gi|167585308|ref|ZP_02377696.1| hypothetical protein BuboB_08232 [Burkholderia ubonensis Bu]
          Length = 374

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 186/383 (48%), Gaps = 40/383 (10%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G TV R  G W +  ++     V   +    +      DLS I  ID +G + +     +
Sbjct: 17  GPTV-RLYGQWTALALARNRGAVARRVAGLAKGRVREWDLSGIERIDHVGGQALW----R 71

Query: 65  YHGKIKLQGVSTHIEQ--LFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
             G+    G++    Q  +F  I    R++   + P+R    +    L    G+ +  F 
Sbjct: 72  VWGRKLPDGIALSETQRTIFERIERLDRQR---EAPERIERIDPVTRL----GRALFTFA 124

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ------------MYYVGVSGVPV 170
                   + G V+ +               LS++R+            +Y  G   +P+
Sbjct: 125 EHLQGGIAMFGRVMLDA--------------LSVLRRPKTMPWKETSANVYSAGAQALPI 170

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
             L++F+ G V++   A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A
Sbjct: 171 TALVAFLIGIVLSYLSAQQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITA 230

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           +IG M++ EE+DA+R MG+     L+ PR+ AL +++PLL +  N  A+ G ++      
Sbjct: 231 QIGVMRVTEELDAMRVMGIPHGLRLVLPRVLALGVAMPLLVMWTNIIALTGGALAAKLAL 290

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
            I F+ F         +AN++ GL K       I +VA   GF +  +S SLG+  TT V
Sbjct: 291 GIDFSFFVRSLPGVVPIANLYIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSV 350

Query: 351 VQSISIVIIIDSLFAIFYFAIGI 373
           V SI++VI+ D++FA+ +  +G+
Sbjct: 351 VTSITVVILADAVFAMLFQNVGL 373


>gi|33594879|ref|NP_882522.1| putative integral membrane protein [Bordetella parapertussis 12822]
 gi|33564955|emb|CAE39902.1| putative integral membrane protein [Bordetella parapertussis]
          Length = 378

 Score =  129 bits (324), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 169/333 (50%), Gaps = 14/333 (4%)

Query: 43  DLSAITEIDTIGAELIM-YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP-QR 100
           DL  +  +DTIGA L+   + ++   +++    S    ++F  +     + +    P  R
Sbjct: 58  DLRGVERLDTIGAHLLWGAWGQQLPERVRW---SDGQREVFQTLQRNRGEALPAPAPADR 114

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
             +  +  +  +  G+     I        + G ++ + G F       +G    +  Q+
Sbjct: 115 WGWLRAIGDAVFDAGRNGRALII-------MFGQLVLDLGAFL--RRPSRGPWREISAQV 165

Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
           Y  G   + +  L+ F+ G V++   A QL  FGA+ F + L+ +  +RE+G +L A+++
Sbjct: 166 YRTGAQALGITALVGFLIGVVLSYLSAQQLQMFGADRFIVRLLGVSIVRELGPVLAAILV 225

Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280
           AGRSGSAI A+IG M++ +E+DA+  MG+   + LI PR+ AL I++PLL +  +  A++
Sbjct: 226 AGRSGSAITAQIGVMRVTQELDAMLVMGISHGQRLILPRVIALAITMPLLVVWTDAMALL 285

Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
           G  +       +    F +      +L N + G+ K       I +VA   G  +  ++ 
Sbjct: 286 GGMLAAQMQLGVSAQWFLTSLPDAISLTNYWIGMFKGVSFGILIALVACHFGLCIQPNTE 345

Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           SLG+  TT VV SI+ VI++D+L+A+ + +IGI
Sbjct: 346 SLGRGTTTSVVTSITGVILVDALYAVIFSSIGI 378


>gi|303256383|ref|ZP_07342397.1| ABC transporter, permease protein [Burkholderiales bacterium
           1_1_47]
 gi|331001491|ref|ZP_08325109.1| hypothetical protein HMPREF9439_02780 [Parasutterella
           excrementihominis YIT 11859]
 gi|302859874|gb|EFL82951.1| ABC transporter, permease protein [Burkholderiales bacterium
           1_1_47]
 gi|329568220|gb|EGG50037.1| hypothetical protein HMPREF9439_02780 [Parasutterella
           excrementihominis YIT 11859]
          Length = 354

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 37  SDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFS--LISFTHRKKIK 94
           S   I D S +T  D  G  L +Y +       KL  VS  IE L++  L +F+ +   K
Sbjct: 31  SGQTIFDASDLTFCDESGLTL-LYELRSRPDAFKLINVSASIETLYNTMLKNFSPKPVEK 89

Query: 95  NQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLL 154
                 S       +      + I+   +  C+   +L            S  +F G +L
Sbjct: 90  KSLGVVSSLGKWLYDAASSTKQSIIFLGSACCALTDVL---------LHPSQIRF-GEIL 139

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           S+  +    G   V ++ LI F+ G +IA + A     FGA IF ++ + I   RE+G L
Sbjct: 140 SVSDE---AGSRAVGIICLIGFLMGVIIAFETALVAQIFGAVIFVVNGIGIAMTRELGPL 196

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGRSGSA  A++G+ K+NEE++A+ T GL  +  L+ PR+ A  + +PLL++ A
Sbjct: 197 MTAILFAGRSGSAFAAQLGTQKVNEELNALTTFGLSPMYFLVVPRLIASSLVVPLLSVFA 256

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
               I+G  +V+   YDI +  F+ +   + T+ +I  GL+KA      I ++  + G  
Sbjct: 257 TILGILGGGLVM-AMYDITYTQFYVQLLKSVTVTDIVFGLVKAVIFGFVIALIGCQCGMN 315

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
            G  + ++G   T  VV+SI  +++ID   A+    +GI
Sbjct: 316 TGAGAAAVGSSTTKSVVKSIIWIVVIDGAAALLTNRLGI 354


>gi|161523583|ref|YP_001578595.1| hypothetical protein Bmul_0403 [Burkholderia multivorans ATCC
           17616]
 gi|189351647|ref|YP_001947275.1| putative ABC transporter permease [Burkholderia multivorans ATCC
           17616]
 gi|160341012|gb|ABX14098.1| protein of unknown function DUF140 [Burkholderia multivorans ATCC
           17616]
 gi|189335669|dbj|BAG44739.1| putative ABC transport system permease protein [Burkholderia
           multivorans ATCC 17616]
          Length = 374

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 177/374 (47%), Gaps = 31/374 (8%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           R  G W +  ++     VV           +  DLS I  +D +G + +     +  G+ 
Sbjct: 21  RLTGQWTALALARNRGAVVRRAESVATGSVSEWDLSGIGRLDHVGGQALW----RVWGRK 76

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNL---------HYHIGKKIV- 119
              G++    Q  ++     R   + + P+R         L         H H G  +  
Sbjct: 77  LPPGIALTATQ-RTIFERIERLDSQREAPERIVRVGPVTRLGLMLFAFAEHLHGGIAMFG 135

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           + I D+ S      L    T  +  +S             +Y  G   +P+  L++F+ G
Sbjct: 136 RVILDALSV-----LRRPQTMPWKETSAN-----------IYSAGAQALPITALVAFLIG 179

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V++   A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ E
Sbjct: 180 IVLSYLSAQQLQMFGANRYIVNILGLAVIRELGPVLSAILVAGRSGSAITAQIGVMRVTE 239

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DA+R MG+     LI PR+ AL +++PLL +  N  A+ G ++       I    F  
Sbjct: 240 ELDAMRVMGIPHGLRLILPRVLALGVAMPLLVMWTNIVALTGGALAAKMVLGIDVNYFVR 299

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                  +AN++ GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+
Sbjct: 300 SLPGVVPIANLYIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVIL 359

Query: 360 IDSLFAIFYFAIGI 373
            D++FAI +  +G+
Sbjct: 360 ADAVFAILFQNVGL 373


>gi|198282934|ref|YP_002219255.1| hypothetical protein Lferr_0798 [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218665617|ref|YP_002425137.1| ABC transporter, permease protein, putative [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|198247455|gb|ACH83048.1| protein of unknown function DUF140 [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218517830|gb|ACK78416.1| ABC transporter, permease protein, putative [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 378

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/211 (34%), Positives = 122/211 (57%)

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
            G + +P++ LI F+ G VI+ Q A  L+Q+GA I+ I++  +  LRE G L+TA++++G
Sbjct: 166 TGPNSLPILTLIGFLIGVVISFQSASTLAQYGANIYIINIAGLSILREFGPLITAIILSG 225

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           RSGSA  A+IG M + EE+DA+RT G+  +R LI P++  L + +PLL +  +   + GA
Sbjct: 226 RSGSAFTAQIGGMCVTEELDALRTFGIPPIRRLILPKVIGLALVMPLLVLWTDMVGLYGA 285

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
            +V      I    F  +        N++ G++K       I  +A   G  V  ++ SL
Sbjct: 286 MLVAKLELGISNRFFIQQMPVVVPSFNLWLGVVKGALFGILIAWIAGFHGLKVKPNTTSL 345

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
            ++ T  VV SI+++I+ID++ A+ +   GI
Sbjct: 346 SRETTNSVVMSITVMILIDAILALVFANTGI 376


>gi|330818440|ref|YP_004362145.1| hypothetical protein bgla_1g35860 [Burkholderia gladioli BSR3]
 gi|327370833|gb|AEA62189.1| hypothetical protein bgla_1g35860 [Burkholderia gladioli BSR3]
          Length = 395

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 168/331 (50%), Gaps = 11/331 (3%)

Query: 43  DLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF 102
           DLSAI  +D +G + +     +  G    +G++    Q  ++     R     ++P+   
Sbjct: 75  DLSAIDRLDHVGGQALW----RVWGHRLPEGLTLTDNQ-RTIFERIQRLDEAREEPEPVI 129

Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162
            ++    L    G  +++F         + G VI + G             +S    +Y 
Sbjct: 130 RHDPVTRL----GLALMQFGEHLFGGIAMFGRVILDLGSIARRPKTMPWTEISA--NVYN 183

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
            G   +P+  L++F+ G V++   A QL QFGA  + ++++ +  +RE+G +L A+++AG
Sbjct: 184 AGAKALPITALVAFLIGIVLSYLSAQQLQQFGANRYIVNILGLSVIRELGPVLAAILVAG 243

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           RSGSAI A+IG M++ EE+DA+R MG+     ++ PR+ AL +++PLL +  N  A+ G 
Sbjct: 244 RSGSAITAQIGVMRVTEELDAMRVMGIPHGLRIVLPRVLALGVAMPLLVMWTNIVALSGG 303

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
           ++       I    F         +AN++ GL K       I +V    GF +  +S SL
Sbjct: 304 ALAAKLALGIDVNFFIRSLPGVVPIANLWIGLGKGVVFGMLIALVGCHFGFRIKANSQSL 363

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           G+  TT VV SI++VI+ D++FAI +  +G+
Sbjct: 364 GEGTTTSVVTSITVVILADAVFAILFQNVGL 394


>gi|196232812|ref|ZP_03131662.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428]
 gi|196223011|gb|EDY17531.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428]
          Length = 245

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/213 (37%), Positives = 125/213 (58%), Gaps = 1/213 (0%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           QM  +GV  +P+  L SF  G  +A Q A QL + GA  F  DL+ +  LRE+G LL AV
Sbjct: 33  QMVLIGVRALPMASLTSFSIGLTLAMQAAGQLRKMGASQFVPDLVILSLLRELGPLLVAV 92

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++ GRSGSA+ AE+G+M+++EEI+A+  M ++ +R LI PR  A++I LP+LTI  ++  
Sbjct: 93  VVIGRSGSAVTAELGTMRVSEEIEALEVMAINPIRFLIVPRFLAMMIMLPVLTIFGSYVG 152

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           ++G   +     D   A +       A   ++++GLIK+   A  I  +A   G  V   
Sbjct: 153 MVGGWSICHFALDYSTASYILHSFERARPWDLYSGLIKSVVFAWIIITIACHMGLRVEGG 212

Query: 339 SNSLGKKVTTCVVQSISIVIIID-SLFAIFYFA 370
           +  +G+  T  VV S+ I++I + +L A+F+FA
Sbjct: 213 AEGVGQATTGSVVWSLLIMLIANATLTALFFFA 245


>gi|221211088|ref|ZP_03584067.1| putative ABC transporter, permease protein [Burkholderia
           multivorans CGD1]
 gi|221168449|gb|EEE00917.1| putative ABC transporter, permease protein [Burkholderia
           multivorans CGD1]
          Length = 446

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 180/380 (47%), Gaps = 32/380 (8%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            G TV R  G W +  ++     VV           +  DLS I  +D +G + +     
Sbjct: 88  QGQTV-RLTGQWTALALARNRGAVVRRAESVATGSVSEWDLSGIGRLDHVGGQALW---- 142

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNL---------HYHI 114
           +  G+    G++    Q  ++     R   + + P+R         L         H H 
Sbjct: 143 RVWGRKLPPGIALTATQ-RTIFERIERLDSQREAPERIVRVGPVTRLGLMLFAFAEHLHG 201

Query: 115 GKKIV-KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           G  +  + I D+ S      L    T  +  +S             +Y  G   +P+  L
Sbjct: 202 GIAMFGRVILDALSV-----LRRPQTMPWKETSAN-----------IYSAGAQALPITAL 245

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           ++F+ G V++   A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG
Sbjct: 246 VAFLIGIVLSYLSAQQLQMFGANRYIVNILGLAVIRELGPVLSAILVAGRSGSAITAQIG 305

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
            M++ EE+DA+R MG+     LI PR+ AL +++PLL +  N  A+ G ++       I 
Sbjct: 306 VMRVTEELDAMRVMGIPHGLRLILPRVLALGVAMPLLVMWTNIVALTGGALAAKMVLGID 365

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              F         +AN++ GL K       I +VA   GF +  +S SLG+  TT VV S
Sbjct: 366 VNYFVRSLPGVVPIANLYIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTS 425

Query: 354 ISIVIIIDSLFAIFYFAIGI 373
           I++VI+ D++FAI +  +G+
Sbjct: 426 ITVVILADAVFAILFQNVGL 445


>gi|221199880|ref|ZP_03572923.1| putative ABC transporter, permease protein [Burkholderia
           multivorans CGD2M]
 gi|221207452|ref|ZP_03580461.1| putative ABC transporter, permease protein [Burkholderia
           multivorans CGD2]
 gi|221172655|gb|EEE05093.1| putative ABC transporter, permease protein [Burkholderia
           multivorans CGD2]
 gi|221180119|gb|EEE12523.1| putative ABC transporter, permease protein [Burkholderia
           multivorans CGD2M]
          Length = 446

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 180/380 (47%), Gaps = 32/380 (8%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            G TV R  G W +  ++     VV           +  DLS I  +D +G + +     
Sbjct: 88  QGQTV-RLTGQWTALALARNRGAVVRRAESVATGSVSEWDLSGIGRLDHVGGQALW---- 142

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNL---------HYHI 114
           +  G+    G++    Q  ++     R   + + P+R         L         H H 
Sbjct: 143 RVWGRKLPPGIALTATQ-RTIFERIERLDSQREAPERVVRVGPITRLGLMLFAFAEHLHG 201

Query: 115 GKKIV-KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           G  +  + I D+ S      L    T  +  +S             +Y  G   +P+  L
Sbjct: 202 GIAMFGRVILDALSV-----LRRPQTMPWKETSAN-----------IYSAGAQALPITAL 245

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           ++F+ G V++   A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG
Sbjct: 246 VAFLIGIVLSYLSAQQLQMFGANRYIVNILGLAVIRELGPVLSAILVAGRSGSAITAQIG 305

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
            M++ EE+DA+R MG+     LI PR+ AL +++PLL +  N  A+ G ++       I 
Sbjct: 306 VMRVTEELDAMRVMGIPHGLRLILPRVLALGVAMPLLVMWTNIVALTGGALAAKMVLGID 365

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              F         +AN++ GL K       I +VA   GF +  +S SLG+  TT VV S
Sbjct: 366 VNYFVRSLPGVVPIANLYIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTS 425

Query: 354 ISIVIIIDSLFAIFYFAIGI 373
           I++VI+ D++FAI +  +G+
Sbjct: 426 ITVVILADAVFAILFQNVGL 445


>gi|91792032|ref|YP_561683.1| hypothetical protein Sden_0670 [Shewanella denitrificans OS217]
 gi|91714034|gb|ABE53960.1| protein of unknown function DUF140 [Shewanella denitrificans OS217]
          Length = 369

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 182/368 (49%), Gaps = 26/368 (7%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEKYHGKI 69
           G+W+     + AD +  AI    QS S I+D  A+   D+  A  ++    + E+    +
Sbjct: 21  GDWQLGHALD-ADSICAAIPS--QSRSVIIDTQALGLWDSSLAVALLQLSRWCEQAELPL 77

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
            L      ++QL  L +     + ++Q  Q S       NL    G+ +   +       
Sbjct: 78  SLDACPPSLQQLLKLATEVPSNQTQSQA-QLSLKQKLRANLTEQ-GQGVYDSL------- 128

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYY----VGVSGVPVVILISFVTGAVIAQQ 185
               L + N+    A S+  +G   +    + +     G  G+ +V LIS + G ++A  
Sbjct: 129 ----LFLGNS--VLAISHWLRGKAKTRASDIIFFIEQAGPQGLAIVTLISLLVGMILAYL 182

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           G+ QL Q GA+++  DL++I  +RE+G L+TAV++AGR+G+A  A++G+M+ NEE+DA+ 
Sbjct: 183 GSVQLRQLGAQVYVADLVAIGMVREMGPLMTAVIMAGRTGAAYAAQLGTMQANEEVDALS 242

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MG+  +  L+ PR+ AL+  +PL+ I ++   IIG  IV      +    +  +     
Sbjct: 243 VMGISAMEFLVVPRLVALVFIMPLMCIYSDAIGIIGGGIVA-NGMGVSATQYLLQAQVAV 301

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
              +I TGL+K+      I I   + G A G +SN++G   T  VV++I  +++ D+   
Sbjct: 302 DWLDITTGLVKSLIFGILIAIAGCQAGLACGRNSNAVGVATTKAVVKAIVFLVVSDAALN 361

Query: 366 IFYFAIGI 373
           I Y  +GI
Sbjct: 362 ILYDKLGI 369


>gi|187476645|ref|YP_784668.1| membrane protein [Bordetella avium 197N]
 gi|115421231|emb|CAJ47736.1| putative membrane protein [Bordetella avium 197N]
          Length = 377

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 169/333 (50%), Gaps = 14/333 (4%)

Query: 43  DLSAITEIDTIGAELIMYFM-EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
           DL  I  +DTIGA L+     E+   +++L   +    ++F+ ++  +   +    P   
Sbjct: 57  DLRGIQRLDTIGANLLWRLWGERLPERVRL---TDGQREVFNALA-VNPGAVAPAPP--- 109

Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQAHILG-LVISNTGEFCASSYKFKGFLLSLIRQM 160
                  +    IG+ I    ++      +LG LV+   G     S   +G    +  Q+
Sbjct: 110 --VTDRLSWVRAIGQAIFDAAHNGIMLLRMLGQLVLDFIGLLLRPS---RGPWREISAQI 164

Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
           Y  G   + +  L+ F+ G V++   A QL  FGA+ F + L+ +  +RE+G +L A+++
Sbjct: 165 YRTGAQALGITALVGFLIGVVLSYLSAQQLQMFGADRFIVRLLGVSIVRELGPVLAAILV 224

Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280
           AGRSGSAI A+IG M++ +E+DA+  MG+   + LI PR+ AL I++PLL +  +  A++
Sbjct: 225 AGRSGSAITAQIGVMRVTQELDAMSVMGISQSQRLILPRVVALAITMPLLVLWTDAMALL 284

Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
           G  +       I    F     +  T+ N + G++K       I +VA   G  +   + 
Sbjct: 285 GGMLAAQMQLGISAQWFLESLPNAVTITNYWIGMVKGVSFGVLIALVACHFGLRIKPDTE 344

Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           SLG+  TT VV SI+ VI++D+L+A+    +GI
Sbjct: 345 SLGRGTTTSVVTSITGVILVDALYAVILSGMGI 377


>gi|30248137|ref|NP_840207.1| ABC transporter permease [Nitrosomonas europaea ATCC 19718]
 gi|30180022|emb|CAD84017.1| possible ABC transport permease [Nitrosomonas europaea ATCC 19718]
          Length = 386

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 179/345 (51%), Gaps = 24/345 (6%)

Query: 36  QSDSAIV--DLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
           QSD++ +  DL+ ++++D  GA      + +  G+ +   +    EQ    +       +
Sbjct: 55  QSDASSLHWDLTDVSQLDYAGA----VMLWRIWGEQRPAHLLLRPEQERMFLRLEKSVSL 110

Query: 94  KNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGE-----FCASSYK 148
             Q P+R  F          +GK++++F++      H+ G+ I+ +G+     F   ++ 
Sbjct: 111 PEQ-PRRILFLPI-----SMLGKQLLRFLD------HLTGM-ITLSGQIVLDLFFLMTHP 157

Query: 149 FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL 208
            +     +   +Y  G   + +  ++ F+ G V++   + QL  FGA+I+ ++++ +  +
Sbjct: 158 GRIPAREISANLYRTGAQALGITAVVGFLIGIVLSYLTSEQLHMFGADIYIVNILGMSII 217

Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268
           RE+G +L A+++AGRSGSA+ A++G M++ EE+DA+  MG+     L+ P+I  L I+LP
Sbjct: 218 RELGPMLAAILVAGRSGSAMTAQLGVMRVTEELDALTVMGIPHSMRLVLPKIIGLGIALP 277

Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328
           L+ +  +  A++G  +       +      +    T  +AN++ GL K       I ++A
Sbjct: 278 LIVLWTSAIALLGGLVAAELQIGLSIHYALTALPDTVPIANLWLGLGKGMVCGMTIALIA 337

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
              G  +  ++ SLG+  T  VV SI+ VI+ID++FA+ +  IGI
Sbjct: 338 CHFGLRIKPNTESLGEGTTNSVVTSITAVILIDAIFAVAFSNIGI 382


>gi|293602529|ref|ZP_06684975.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Achromobacter piechaudii ATCC 43553]
 gi|292819291|gb|EFF78326.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Achromobacter piechaudii ATCC 43553]
          Length = 383

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 174/332 (52%), Gaps = 12/332 (3%)

Query: 43  DLSAITEIDTIGAELIMY-FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
           DL  I+ +DTIGA LI   + EK   +++    S   + +F+ ++  ++ +++   P+  
Sbjct: 63  DLHGISRLDTIGALLIWQAWGEKLPERVRW---SAGQQDVFNALAM-NKGEVQTAPPKPE 118

Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY 161
            F          +G  I++   +  +   +LG ++ + G          G    +  Q+Y
Sbjct: 119 TF-----GWVRGLGGAILQAAENGRALLIMLGQLMLDLGGMLRRPRL--GPWREISAQVY 171

Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221
             G   + +  L+ F+ G V++   A QL   GA+ F + L+ +  +RE+G +L A+++A
Sbjct: 172 RTGAQALGITALVGFLIGVVLSYLSAQQLQMIGADRFIVRLLGVSIVRELGPVLAAILVA 231

Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281
           GRSGSAI A+IG M++ +E+DA+  MG+   + LI PR+ AL +++PLL +  +  AI+G
Sbjct: 232 GRSGSAITAQIGVMRVTQELDAMLVMGISHGQRLILPRVVALAVTMPLLVLWTDAMAILG 291

Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341
             +       +    F +      +L N + G+ K       I ++A   G  +  ++ S
Sbjct: 292 GMLAAQMQLGVSAQWFLTSLPDAISLTNYWIGIFKGVTFGILIALIACHFGLRIQPNTES 351

Query: 342 LGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           LG+  TT VV SI+ VI++D+L+AI + ++G+
Sbjct: 352 LGRGTTTSVVTSITGVILLDALYAIIFSSVGV 383


>gi|116619717|ref|YP_821873.1| hypothetical protein Acid_0582 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116222879|gb|ABJ81588.1| protein of unknown function DUF140 [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 265

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 126/218 (57%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
            +I QM  +GV  +P+V+L  F +GAV+A Q +  L+Q+G    +  ++S+   RE+G +
Sbjct: 46  DIILQMDTIGVGSLPIVVLTGFFSGAVMALQMSRALAQYGQVGKTGTVVSVTLARELGPV 105

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           LTA+M+AGR+ S I +E+GSMK+ E+IDA+R +G D V+ L++PR+ A  + LPLLTI+A
Sbjct: 106 LTALMVAGRNASGIASELGSMKVTEQIDAMRALGTDPVQKLVTPRLIATGVMLPLLTIIA 165

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
           +F  + G  I+   + ++P   +++         ++  GL+K    A  I +V    G  
Sbjct: 166 DFVGMFGGFIIAKFFLNLPPRQYWTSVWRALEWNDVTQGLLKPLIFAIVISLVGCFYGLR 225

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
               +  +G+  T  VV +  +V ++D L    + + G
Sbjct: 226 TTGGTQGVGRSTTQAVVLATVLVFVLDLLITKIFVSQG 263


>gi|326800463|ref|YP_004318282.1| hypothetical protein Sph21_3067 [Sphingobacterium sp. 21]
 gi|326551227|gb|ADZ79612.1| protein of unknown function DUF140 [Sphingobacterium sp. 21]
          Length = 254

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 119/223 (53%), Gaps = 4/223 (1%)

Query: 141 EFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSI 200
           E     Y+FK     +I Q Y VGV  +P++ L  F+TG V   Q    L  FGA     
Sbjct: 26  ELVMPPYEFK----EIINQCYEVGVKSLPLISLTGFITGIVFTNQSRPSLEDFGATAMLP 81

Query: 201 DLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRI 260
            L++I  +R +  L+TA++ AG+ GS I AE+GSMK+ E+IDA+   G +  + L+  R+
Sbjct: 82  SLIAIAIVRALAPLVTALIAAGKVGSNIGAELGSMKVTEQIDAMEVSGTNPFKFLVVSRV 141

Query: 261 WALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320
            A  I +P+L+    F  ++G+ + ++++  + F  FF +   T T  +IF  +IKA F 
Sbjct: 142 LATTIMIPILSCYTGFVGLMGSFLNVYQHESVSFISFFDQVFETVTFLDIFQAIIKAAFF 201

Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              IGIV   +G+     +  +GK     VV S+ ++ I + L
Sbjct: 202 GFTIGIVGCYQGYNSSKGTEGVGKAANAAVVASMFLIFIEEQL 244


>gi|167617722|ref|ZP_02386353.1| ABC transporter, permease protein [Burkholderia thailandensis Bt4]
 gi|257140414|ref|ZP_05588676.1| ABC transporter, permease protein [Burkholderia thailandensis E264]
          Length = 374

 Score =  127 bits (318), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 181/376 (48%), Gaps = 35/376 (9%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           R +G W +  ++    +V   I +  +      DLS +  +D +G + +     +  G+ 
Sbjct: 21  RLSGQWTALALARDRGNVARRIARLAKEPVGEWDLSGVDRLDHVGGQALW----RVWGRR 76

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
              G++    Q  ++     R     + P+     +         G+ +  F        
Sbjct: 77  LPAGIALTDNQ-RTVFERIERLDAGREAPEPVVRIDPVT----RFGQGLFTFGEHLYGGI 131

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQ------------MYYVGVSGVPVVILISFV 177
            +LG +I +              LLS++R+            +Y  G   +P+  L++F+
Sbjct: 132 ALLGGLIVD--------------LLSVLRRPRTMPWTEISANVYAAGTKALPITALVAFL 177

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V++   A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++
Sbjct: 178 IGIVLSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRV 237

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EE+DA+R MG+     +  PR+ AL +++PLL +  N  A+ G ++       I    F
Sbjct: 238 TEELDAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDLNFF 297

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                S   +AN+F GL K       I +VA   GF +  +S SLG+  TT VV SI++V
Sbjct: 298 VRSLPSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVV 357

Query: 358 IIIDSLFAIFYFAIGI 373
           I+ D++FAI +  +G+
Sbjct: 358 ILADAVFAILFQNVGL 373


>gi|167579644|ref|ZP_02372518.1| ABC transporter, permease protein [Burkholderia thailandensis
           TXDOH]
          Length = 374

 Score =  127 bits (318), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 181/376 (48%), Gaps = 35/376 (9%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           R +G W +  ++    +V   I +  +      DLS +  +D +G + +     +  G+ 
Sbjct: 21  RLSGQWTALALARDRGNVARRIARLAKEPVGEWDLSGVDRLDHVGGQALW----RVWGRR 76

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
              G++    Q  ++     R     + P+     +         G+ +  F        
Sbjct: 77  LPAGIALTDNQ-RTVFERIERLDAGREAPEPVVRIDPVT----RFGQGLFTFGEHLYGGI 131

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQ------------MYYVGVSGVPVVILISFV 177
            +LG +I +              LLS++R+            +Y  G   +P+  L++F+
Sbjct: 132 ALLGGLIVD--------------LLSVLRRPRTMPWTEISANVYAAGTKALPITALVAFL 177

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V++   A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++
Sbjct: 178 IGIVLSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRV 237

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EE+DA+R MG+     +  PR+ AL +++PLL +  N  A+ G ++       I    F
Sbjct: 238 TEELDAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDLNFF 297

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                S   +AN+F GL K       I +VA   GF +  +S SLG+  TT VV SI++V
Sbjct: 298 VRSLPSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVV 357

Query: 358 IIIDSLFAIFYFAIGI 373
           I+ D++FAI +  +G+
Sbjct: 358 ILADAVFAILFQNVGL 373


>gi|83720699|ref|YP_440931.1| ABC transporter permease [Burkholderia thailandensis E264]
 gi|83654524|gb|ABC38587.1| ABC transporter, permease protein [Burkholderia thailandensis E264]
          Length = 404

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 181/376 (48%), Gaps = 35/376 (9%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           R +G W +  ++    +V   I +  +      DLS +  +D +G + +     +  G+ 
Sbjct: 51  RLSGQWTALALARDRGNVARRIARLAKEPVGEWDLSGVDRLDHVGGQALW----RVWGRR 106

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
              G++    Q  ++     R     + P+     +         G+ +  F        
Sbjct: 107 LPAGIALTDNQR-TVFERIERLDAGREAPEPVVRIDPVT----RFGQGLFTFGEHLYGGI 161

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQ------------MYYVGVSGVPVVILISFV 177
            +LG +I +              LLS++R+            +Y  G   +P+  L++F+
Sbjct: 162 ALLGGLIVD--------------LLSVLRRPRTMPWTEISANVYAAGTKALPITALVAFL 207

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V++   A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++
Sbjct: 208 IGIVLSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRV 267

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EE+DA+R MG+     +  PR+ AL +++PLL +  N  A+ G ++       I    F
Sbjct: 268 TEELDAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDLNFF 327

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                S   +AN+F GL K       I +VA   GF +  +S SLG+  TT VV SI++V
Sbjct: 328 VRSLPSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVV 387

Query: 358 IIIDSLFAIFYFAIGI 373
           I+ D++FAI +  +G+
Sbjct: 388 ILADAVFAILFQNVGL 403


>gi|78357028|ref|YP_388477.1| ABC transporter permease [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78219433|gb|ABB38782.1| ABC transporter permease protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
          Length = 373

 Score =  126 bits (317), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 160/348 (45%), Gaps = 17/348 (4%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G  V  F G W   +       + + +    +  +     + +T  D+         +E 
Sbjct: 12  GRCVIVFQGRWTLHDTVPSVGKLALRLESDCRGGAVSFSCAGLTAWDSRFLTFCRSVLET 71

Query: 65  YHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN-LHYHIGKKIVK 120
             G+       G+   + +L SL +         Q P+R     S K+ L   +G+ +  
Sbjct: 72  LEGRGIAYDTSGLPDGVLRLLSLAA---------QVPEREGAAVSRKSPLSARMGEALHA 122

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFK-GFLLSLIRQMYYVGVSGVPVVILISFVTG 179
               + S    +G V  +    C     F+     +L+R   + G   +P+V LIS + G
Sbjct: 123 AFAGTISVMEFIGDVTLSVLRMCIGRAVFRWSDTFALLR---FCGAQSLPIVSLISMLAG 179

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            + A  GA QL  FGAEI+   L+ I  LR +G ++TA++++GR G+A  AE+G+M++NE
Sbjct: 180 LIFAFVGAVQLKMFGAEIYVASLVGIAMLRVMGAVMTAIIVSGRVGAAFAAELGTMQVNE 239

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDA  T G+  +  L+ PR+ AL++ +PLL + AN   I+G + V W   DI    +F+
Sbjct: 240 EIDAFSTFGISPLDFLVLPRMLALVLMMPLLCVYANLMGIVGGAAVGWLMLDINLHQYFN 299

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
               T +L +   G+  +      + + +   G   G  ++++GK  T
Sbjct: 300 MTWQTVSLTHFGVGIAHSVVFGFVVAVCSCYMGIHCGRSASAVGKATT 347


>gi|311109431|ref|YP_003982284.1| hypothetical protein AXYL_06276 [Achromobacter xylosoxidans A8]
 gi|310764120|gb|ADP19569.1| hypothetical protein AXYL_06276 [Achromobacter xylosoxidans A8]
          Length = 354

 Score =  126 bits (317), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 185/365 (50%), Gaps = 13/365 (3%)

Query: 11  FAGNWKSPEISEIADDVVMAINKSIQSDS-AIVDLSAITEIDTIGAELIMY-FMEKYHGK 68
            AG+W    ++E  +        +  +D  A  DL  I  +DTIGA LI   +  K   +
Sbjct: 1   MAGDWSVLALAEPGEVQRRREALACATDGGARWDLHGIGRLDTIGALLIWEAWGHKLPER 60

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
           ++    S   + +F+ ++  ++ +     P+R  +     +    +G+ I + I++  + 
Sbjct: 61  VRW---SAGQQDVFNALAM-NKGETPAAAPKRDPW-----SWPRAVGEAIFQAIDNGRAL 111

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             +LG ++ + G          G    +  Q+Y  G   + +  L+ F+ G V++   A 
Sbjct: 112 LVMLGQLVLDFGGMLRRPRL--GPWREISAQVYRTGAQALGITALVGFLIGVVLSYLSAQ 169

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           QL   GA+ F + L+ +  +RE+G +L A+++AGRSGSAI A+IG M++ +E+DA+  MG
Sbjct: 170 QLQMIGADRFIVRLLGVSIVRELGPVLAAILVAGRSGSAITAQIGVMRVTQELDAMLVMG 229

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +   + LI PR+ AL +++PLL +  +  AI+G  +       +    F        +L 
Sbjct: 230 ISHGQRLILPRVVALAVTMPLLVLWTDAMAILGGMLAAQMQLGVSAQWFLQSLPDAISLT 289

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           N + G++K       I ++A   G  +  ++ SLG+  TT VV SI+ VI++D+ +A+ +
Sbjct: 290 NYWIGILKGVTFGMLIALIACHFGLRIQPNTESLGRGTTTSVVTSITGVILLDAFYAVIF 349

Query: 369 FAIGI 373
            ++GI
Sbjct: 350 SSVGI 354


>gi|255019625|ref|ZP_05291705.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Acidithiobacillus caldus
           ATCC 51756]
 gi|254970928|gb|EET28410.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Acidithiobacillus caldus
           ATCC 51756]
          Length = 380

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 78/210 (37%), Positives = 124/210 (59%)

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G   +P++ LI F+ G VI+ Q A  L+ +GA I+ I +  +  LRE G L+TAV++AGR
Sbjct: 168 GPDSLPILSLIGFLIGIVISFQSAPTLASYGANIYIISIAGLSILREFGPLITAVILAGR 227

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           +GSA  A+IG+M++ EE+DA+RT G+  V+ LI P++ AL I+LPLL +  +  AI+GA 
Sbjct: 228 TGSAFTAQIGAMRVTEELDALRTFGISPVQRLILPKVIALAITLPLLVVWTDAVAILGAI 287

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           IV      I  + F           N + G+ K       I  V+   G  V  +++SL 
Sbjct: 288 IVAKLDLGISASFFLREMPIMVPDFNFWLGIGKGILFGILIAWVSGYHGLKVQPNTDSLS 347

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           ++ T  VV ++++VI+ID++ A+ +   GI
Sbjct: 348 RETTDSVVLTLTLVIVIDAVLAMVFANTGI 377


>gi|114777488|ref|ZP_01452485.1| ABC-type transport system involved in resistance to organic
           solvents [Mariprofundus ferrooxydans PV-1]
 gi|114552270|gb|EAU54772.1| ABC-type transport system involved in resistance to organic
           solvents [Mariprofundus ferrooxydans PV-1]
          Length = 257

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 76/215 (35%), Positives = 120/215 (55%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q   VGV  +PVV+L +  TG V+A Q      +F AE  +  ++S+  +RE+G +L
Sbjct: 43  LLQQAEEVGVQSLPVVMLTALFTGMVLALQSYIVFHRFAAESLTGLVVSMSLVRELGPVL 102

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
             +M+AGR G+A  AE+G+M++ E+IDA+ T+  D VR LI PR+ A+ + +PLL ++A+
Sbjct: 103 VGLMVAGRVGAAFAAELGTMRVTEQIDALWTLSTDPVRYLIMPRLIAVTLMMPLLVVVAD 162

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
           F  I G   +     D   +V+         L++ +TGL+KA F    IGI+   EGF  
Sbjct: 163 FIGIYGGYAISIYLLDQNPSVYIENTTQYMELSDFYTGLVKAGFFGILIGIIGCTEGFNC 222

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
              +  +G   T  VV S   ++I D     + FA
Sbjct: 223 KGGAAGVGTATTRAVVISCMSILISDYFLTAWMFA 257


>gi|254251295|ref|ZP_04944613.1| hypothetical protein BDAG_00477 [Burkholderia dolosa AUO158]
 gi|124893904|gb|EAY67784.1| hypothetical protein BDAG_00477 [Burkholderia dolosa AUO158]
          Length = 386

 Score =  126 bits (316), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 78/215 (36%), Positives = 128/215 (59%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
            +Y  G   +P+  L++F+ G V++   A QL  FGA  + ++++ +  +RE+G +L+A+
Sbjct: 171 NVYSAGAQALPITALVAFLIGIVLSYLSAQQLQMFGANRYIVNILGLSVIRELGPVLSAI 230

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++AGRSGSAI A+IG M++ EE+DA+R MG+     LI PR+ AL +++PLL +  N  A
Sbjct: 231 LVAGRSGSAITAQIGVMRVTEELDAMRVMGIPHGLRLILPRVLALGVAMPLLVMWTNIVA 290

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           + G ++       I    F         +AN++ GL K       I +VA   GF +  +
Sbjct: 291 LTGGALAAKMVLGIDVNYFVRSLPGVVPIANLYIGLGKGVVFGMLIALVACHFGFRIKAN 350

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           S SLG+  TT VV SI++VI+ D++FAI +  +G+
Sbjct: 351 SQSLGEGTTTSVVTSITVVILADAVFAILFQNVGL 385


>gi|254000132|ref|YP_003052195.1| hypothetical protein Msip34_2431 [Methylovorus sp. SIP3-4]
 gi|313202095|ref|YP_004040753.1| hypothetical protein MPQ_2372 [Methylovorus sp. MP688]
 gi|253986811|gb|ACT51668.1| protein of unknown function DUF140 [Methylovorus sp. SIP3-4]
 gi|312441411|gb|ADQ85517.1| conserved hypothetical protein [Methylovorus sp. MP688]
          Length = 371

 Score =  126 bits (316), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 90/366 (24%), Positives = 171/366 (46%), Gaps = 15/366 (4%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           R  G W    +     ++  A+           DL A  ++DT GA +++     + GK+
Sbjct: 19  RLLGQWSLRALDNDFAELKQALQPFFSDPFTQWDLLATEQLDTAGATILL---NGWEGKL 75

Query: 70  --KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
             ++Q V+     LF+ +           +   +F   +   L     + +  F+     
Sbjct: 76  DARMQ-VTEEQRALFTTLQGLRVPARTGSQFDWAFPLVATGELVMKFAQHLTDFVQLIGL 134

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +  ++        S++ ++ F+ ++    Y  GV+ +PV  L+ F+ G  ++   +
Sbjct: 135 LLLEMLYLVRR-----PSAFPWREFMANI----YKSGVTALPVTGLLGFMIGVAMSYLMS 185

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA+IF ++++ +  +RE+G +L A+++AGRSGSA+ A+IG M++ EEIDA+ TM
Sbjct: 186 SQLRTFGADIFIVNILGLSMIRELGPILMAILVAGRSGSAMTAQIGVMRVTEEIDALTTM 245

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+  +  ++ P++  L    P L +  +F  + G ++       + F  FF         
Sbjct: 246 GVSRILRIVLPKVLGLTFVAPFLVLWTSFWGLAGGALSANTELGLSFRFFFDYLPMVVEP 305

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            N+   L K       + +VA   G  +  ++ SL    T+ VV +I+ VI++D+ FAI 
Sbjct: 306 VNLTLSLFKGLLFGFVVTLVACHFGLRIMPNTESLSASTTSSVVTAITSVILLDAAFAIL 365

Query: 368 YFAIGI 373
              IG+
Sbjct: 366 TSGIGV 371


>gi|209521691|ref|ZP_03270381.1| protein of unknown function DUF140 [Burkholderia sp. H160]
 gi|209497882|gb|EDZ98047.1| protein of unknown function DUF140 [Burkholderia sp. H160]
          Length = 388

 Score =  126 bits (316), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 188/372 (50%), Gaps = 20/372 (5%)

Query: 8   VFRFAGNWKSPEISEIADDV-VMAINKSIQSDSAI--VDLSAITEIDTIGAELIMYFMEK 64
           + R +G W +  ++   +   V+ + +++     I   DLS +  +D +G + +     +
Sbjct: 31  IVRLSGQWTALALARDRETGHVIPLLRALTGAQGIGEWDLSGVDRMDHVGGQALW----R 86

Query: 65  YHGKIKLQGVSTHIEQ--LFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
             G+    G +    Q  +F  I+     +   +   R    + F  L    G  I  F+
Sbjct: 87  VWGRKMPPGTALTDTQRDIFERIALLDTVRESAEPVSR---IDPFTRL----GLGIFSFL 139

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR-QMYYVGVSGVPVVILISFVTGAV 181
           +       +LG V+    +  A + K K    + I   +Y  G   +P+  L++F+ G V
Sbjct: 140 DHMQGGVTMLGRVVL---DLLAIARKPKLTPWTEISANIYNAGARALPITALVAFLIGIV 196

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           ++   A QL  FGA  F ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+
Sbjct: 197 LSYLSAQQLRIFGANQFIVNILGLAVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEEL 256

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+R MG+     LI PR+ AL +++PLL +  N  ++ G ++       I  + F  + 
Sbjct: 257 DAMRVMGIPHGLRLILPRVVALAVAMPLLVMWTNVISLTGGALAAKLVLGIEMSFFARQL 316

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            S   +AN++ GL K       I I     GF +  +S SLG+  TT VV SI+IVI+ D
Sbjct: 317 PSVVPIANLWIGLGKGAVFGMLIAIAGCHFGFRIKANSQSLGEGTTTSVVTSITIVILAD 376

Query: 362 SLFAIFYFAIGI 373
           ++FAI +  +G+
Sbjct: 377 AVFAILFQNVGL 388


>gi|73539807|ref|YP_294327.1| hypothetical protein Reut_A0101 [Ralstonia eutropha JMP134]
 gi|72117220|gb|AAZ59483.1| Protein of unknown function DUF140 [Ralstonia eutropha JMP134]
          Length = 357

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 168/338 (49%), Gaps = 13/338 (3%)

Query: 37  SDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ-GVSTHIEQLFSLISFTHRKKIKN 95
            D A   L+ + ++D IG +L+    + + GK+  +   S    ++F  I+  H    + 
Sbjct: 32  PDDAHWSLAGVDKLDHIGGQLLW---QAWDGKLPQRLDASEGQRRVFERIADLHADGWRK 88

Query: 96  QKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLS 155
              +R   +N         G  ++ F   + +   +LG +  +   F  +    +G    
Sbjct: 89  HIVER---FNPIT----LFGASVLSFCAQAANGVSMLGQLTFDLIRF--ARMPQRGPWRE 139

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +   +Y +G   + +  L+ F+ G V++   A QL  FGA  F ++++ +  +RE+G +L
Sbjct: 140 ISANIYNIGYKALGITALVGFLIGIVLSYLSANQLRTFGASTFIVNILGMAVIRELGPVL 199

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A+++AGRSGSAI A+IG M++ EE+DA+R MG+     LI PR+ AL + +PLL    +
Sbjct: 200 AAILVAGRSGSAITAQIGVMRVTEELDAMRVMGISHGFRLIMPRVIALAVCMPLLVAWTD 259

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             A+ G  I       I    F         +AN++ GL K       IG+ A   G  +
Sbjct: 260 VLALAGGIIAARMQLGISPTFFLRALPDAVPVANLWLGLGKGVAFGILIGLAACHFGLRI 319

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
             ++ SLG+  T  VV SI+IVI+ D++FA+ +  +G+
Sbjct: 320 KPNTQSLGEGTTASVVVSITIVIVADAIFAVMFKDVGL 357


>gi|307635079|gb|ADI85448.2| ABC transporter, membrane protein of unknown function DUF140
           [Geobacter sulfurreducens KN400]
          Length = 380

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 140/277 (50%), Gaps = 3/277 (1%)

Query: 98  PQRSFFYN-SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156
           P+++  +  S   L   I  +++         +  LG V    G   A   +F+     L
Sbjct: 106 PEQTLTHGGSRPPLLERIADRVIGMWKSMVEMSAFLGEVTVACGRLLAGRARFRRS--EL 163

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +  M   G   +P+V LISF+ G ++A  GA QLS FGA+I+   L+ I  +R +G ++T
Sbjct: 164 LAIMQECGAQALPIVSLISFLVGLILAFVGAVQLSMFGAQIYVASLVGIGIVRIMGAIMT 223

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
            +++AGR+G+A  A +G+M++NEEIDA+ T+G+  V  L+ PR+ AL++ +PLL + A+ 
Sbjct: 224 GIIMAGRTGAAFAARLGTMQVNEEIDALATLGISPVEFLVIPRVAALVLMMPLLCLYADL 283

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
             I+G   V     D+    + +       L + + GL  +      + +     G   G
Sbjct: 284 MGILGGLAVGVLMLDLNVTEYITMTKKAVRLKDFWVGLFHSGVFGVLVALAGCLRGIQCG 343

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
             ++S+G   T+ VV  I  +++  ++  +    +GI
Sbjct: 344 RSASSVGDAATSAVVTGIVSIVVATAVITVICNILGI 380


>gi|289547869|ref|YP_003472857.1| hypothetical protein Thal_0093 [Thermocrinis albus DSM 14484]
 gi|289181486|gb|ADC88730.1| protein of unknown function DUF140 [Thermocrinis albus DSM 14484]
          Length = 245

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 117/209 (55%)

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           L   ++Q+ Y+G   VPVV++ S  +G VIA Q      +F AE     ++++   RE+G
Sbjct: 29  LYHFVKQLAYLGAETVPVVVITSLFSGGVIALQTYSTFHRFNAEFLIGAVVALSMFRELG 88

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            +LTA+M+  R GSA+ A IG+M+I E+IDA+  MG++ V  L++PRI A ++ LPLLTI
Sbjct: 89  PVLTALMVTARVGSAMTASIGTMRITEQIDALEVMGMNPVSYLVTPRIVAGVLGLPLLTI 148

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           +++ + I+G   V    + +   +F+ R        +   GL KA F    +  V+   G
Sbjct: 149 ISDVAGILGGWFVAVGLFGVNNHLFWERMRDLVEFYDFVGGLYKAVFFGLVVSAVSCYFG 208

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           F     +  +G+  T+ VV S  +V+I D
Sbjct: 209 FYTKGGTEGVGRATTSSVVTSSMLVLISD 237


>gi|167717852|ref|ZP_02401088.1| ABC transporter, permease protein [Burkholderia pseudomallei DM98]
          Length = 374

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 179/374 (47%), Gaps = 16/374 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
              G TV R  G W +  ++    +V   I +  +      DLS +  +D +G + +   
Sbjct: 14  GSQGRTV-RLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALW-- 70

Query: 62  MEKYHGKIKLQGVSTHIEQ--LFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
             +  G+    G++    Q  +F  I    R     + P+     +         G+ + 
Sbjct: 71  --RVWGRRLPDGIALTDNQRVVFERI---ERLDAGRESPEPVVRIDPVT----RFGQGLF 121

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
            F         +LG +I +               +S    +Y  G   +P+  L++F+ G
Sbjct: 122 TFGEHLYGGIALLGSLIVDLLAVLRRPRTMPWTEISA--NVYAAGTKALPITALVAFLIG 179

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V++   A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ E
Sbjct: 180 IVLSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTE 239

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DA+R MG+     +  PR+ AL +++PLL +  N  A+ G ++       I    F  
Sbjct: 240 ELDAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVR 299

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
              S   +AN+F GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+
Sbjct: 300 SLPSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVIL 359

Query: 360 IDSLFAIFYFAIGI 373
            D++FAI +  +G+
Sbjct: 360 ADAVFAILFQNVGL 373


>gi|53718041|ref|YP_107027.1| hypothetical protein BPSL0401 [Burkholderia pseudomallei K96243]
 gi|76809874|ref|YP_332026.1| ABC transporter permease [Burkholderia pseudomallei 1710b]
 gi|126441439|ref|YP_001057484.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 668]
 gi|126452246|ref|YP_001064733.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 1106a]
 gi|134279780|ref|ZP_01766492.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 305]
 gi|167736870|ref|ZP_02409644.1| ABC transporter, permease protein [Burkholderia pseudomallei 14]
 gi|167813976|ref|ZP_02445656.1| ABC transporter, permease protein [Burkholderia pseudomallei 91]
 gi|167822497|ref|ZP_02453968.1| ABC transporter, permease protein [Burkholderia pseudomallei 9]
 gi|167844078|ref|ZP_02469586.1| ABC transporter, permease protein [Burkholderia pseudomallei B7210]
 gi|167892582|ref|ZP_02479984.1| ABC transporter, permease protein [Burkholderia pseudomallei 7894]
 gi|167901079|ref|ZP_02488284.1| ABC transporter, permease protein [Burkholderia pseudomallei NCTC
           13177]
 gi|167909299|ref|ZP_02496390.1| ABC transporter, permease protein [Burkholderia pseudomallei 112]
 gi|167917331|ref|ZP_02504422.1| ABC transporter, permease protein [Burkholderia pseudomallei
           BCC215]
 gi|226193717|ref|ZP_03789320.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|237810635|ref|YP_002895086.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei MSHR346]
 gi|242316672|ref|ZP_04815688.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 1106b]
 gi|254181998|ref|ZP_04888595.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 1655]
 gi|254187927|ref|ZP_04894439.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254196514|ref|ZP_04902938.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei S13]
 gi|254260256|ref|ZP_04951310.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 1710a]
 gi|254295953|ref|ZP_04963410.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 406e]
 gi|52208455|emb|CAH34389.1| putative membrane protein [Burkholderia pseudomallei K96243]
 gi|76579327|gb|ABA48802.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710b]
 gi|126220932|gb|ABN84438.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 668]
 gi|126225888|gb|ABN89428.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 1106a]
 gi|134248980|gb|EBA49062.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 305]
 gi|157805700|gb|EDO82870.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 406e]
 gi|157935607|gb|EDO91277.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|169653257|gb|EDS85950.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei S13]
 gi|184212536|gb|EDU09579.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 1655]
 gi|225934295|gb|EEH30279.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|237504399|gb|ACQ96717.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei MSHR346]
 gi|242139911|gb|EES26313.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 1106b]
 gi|254218945|gb|EET08329.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 1710a]
          Length = 374

 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 183/375 (48%), Gaps = 18/375 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
              G TV R  G W +  ++    +V   I +  +      DLS +  +D +G + +   
Sbjct: 14  GSQGRTV-RLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALW-- 70

Query: 62  MEKYHGKIKLQGVSTHIEQ--LFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
             +  G+    G++    Q  +F  I      +   +   R      F    +  G+ + 
Sbjct: 71  --RVWGRRLPDGIALTDNQRVVFERIERLDAGRESPEPVVRIDPVTRFGQGLFTFGEHLY 128

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR-QMYYVGVSGVPVVILISFVT 178
             I      A + GL++    +  A   + +    + I   +Y  G   +P+  L++F+ 
Sbjct: 129 GGI------ALLGGLIV----DLLAVLRRPRTMPWTEISANVYAAGTKALPITALVAFLI 178

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G V++   A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ 
Sbjct: 179 GIVLSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVT 238

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE+DA+R MG+     +  PR+ AL +++PLL +  N  A+ G ++       I    F 
Sbjct: 239 EELDAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFV 298

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
               S   +AN+F GL K       I +VA   GF +  +S SLG+  TT VV SI++VI
Sbjct: 299 RSLPSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVI 358

Query: 359 IIDSLFAIFYFAIGI 373
           + D++FAI +  +G+
Sbjct: 359 LADAVFAILFQNVGL 373


>gi|217419400|ref|ZP_03450906.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 576]
 gi|217396704|gb|EEC36720.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 576]
          Length = 366

 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 183/375 (48%), Gaps = 18/375 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
              G TV R  G W +  ++    +V   I +  +      DLS +  +D +G + +   
Sbjct: 6   GSQGRTV-RLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALW-- 62

Query: 62  MEKYHGKIKLQGVSTHIEQ--LFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
             +  G+    G++    Q  +F  I      +   +   R      F    +  G+ + 
Sbjct: 63  --RVWGRRLPDGIALTDNQRVVFERIERLDAGRESPEPVVRIDPVTRFGQGLFTFGEHLY 120

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR-QMYYVGVSGVPVVILISFVT 178
             I      A + GL++    +  A   + +    + I   +Y  G   +P+  L++F+ 
Sbjct: 121 GGI------ALLGGLIV----DLLAVLRRPRTMPWTEISANVYAAGTKALPITALVAFLI 170

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G V++   A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ 
Sbjct: 171 GIVLSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVT 230

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE+DA+R MG+     +  PR+ AL +++PLL +  N  A+ G ++       I    F 
Sbjct: 231 EELDAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFV 290

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
               S   +AN+F GL K       I +VA   GF +  +S SLG+  TT VV SI++VI
Sbjct: 291 RSLPSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVI 350

Query: 359 IIDSLFAIFYFAIGI 373
           + D++FAI +  +G+
Sbjct: 351 LADAVFAILFQNVGL 365


>gi|254176752|ref|ZP_04883409.1| putative ABC transporter, permease protein [Burkholderia mallei
           ATCC 10399]
 gi|254202028|ref|ZP_04908392.1| putative ABC transporter, permease protein [Burkholderia mallei
           FMH]
 gi|254207359|ref|ZP_04913710.1| putative ABC transporter, permease protein [Burkholderia mallei
           JHU]
 gi|147747922|gb|EDK54998.1| putative ABC transporter, permease protein [Burkholderia mallei
           FMH]
 gi|147752901|gb|EDK59967.1| putative ABC transporter, permease protein [Burkholderia mallei
           JHU]
 gi|160697793|gb|EDP87763.1| putative ABC transporter, permease protein [Burkholderia mallei
           ATCC 10399]
          Length = 374

 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 183/375 (48%), Gaps = 18/375 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
              G TV R  G W +  ++    +V   I +  +      DLS +  +D +G + +   
Sbjct: 14  GSQGRTV-RLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALW-- 70

Query: 62  MEKYHGKIKLQGVSTHIEQ--LFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
             +  G+    G++    Q  +F  I      +   +   R      F    +  G+ + 
Sbjct: 71  --RVWGRRLPDGIALTDNQRVVFKRIERLDAGRESPEPVVRIDPVTRFGQGLFTFGEHLY 128

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR-QMYYVGVSGVPVVILISFVT 178
             I      A + GL++    +  A   + +    + I   +Y  G   +P+  L++F+ 
Sbjct: 129 GGI------ALLGGLIV----DLLAVLRRPRTMPWTEISANVYAAGTKALPITALVAFLI 178

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G V++   A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ 
Sbjct: 179 GIVLSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVT 238

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE+DA+R MG+     +  PR+ AL +++PLL +  N  A+ G ++       I    F 
Sbjct: 239 EELDAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFV 298

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
               S   +AN+F GL K       I +VA   GF +  +S SLG+  TT VV SI++VI
Sbjct: 299 RSLPSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVI 358

Query: 359 IIDSLFAIFYFAIGI 373
           + D++FAI +  +G+
Sbjct: 359 LADAVFAILFQNVGL 373


>gi|53724609|ref|YP_101915.1| ABC transporter permease [Burkholderia mallei ATCC 23344]
 gi|52428032|gb|AAU48625.1| ABC transporter, permease protein [Burkholderia mallei ATCC 23344]
          Length = 355

 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 176/367 (47%), Gaps = 15/367 (4%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R  G W +  ++    +V   I +  +      DLS +  +D +G + +     +  G+
Sbjct: 1   MRLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALW----RVWGR 56

Query: 69  IKLQGVSTHIEQ--LFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
               G++    Q  +F  I    R     + P+     +         G+ +  F     
Sbjct: 57  RLPDGIALTDNQRVVFKRI---ERLDAGRESPEPVVRIDPVT----RFGQGLFTFGEHLY 109

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
               +LG +I +               +S    +Y  G   +P+  L++F+ G V++   
Sbjct: 110 GGIALLGGLIVDLLAVLRRPRTMPWTEISA--NVYAAGTKALPITALVAFLIGIVLSYLS 167

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R 
Sbjct: 168 AQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRV 227

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG+     +  PR+ AL +++PLL +  N  A+ G ++       I    F     S   
Sbjct: 228 MGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSLPSVVP 287

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           +AN+F GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI
Sbjct: 288 IANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAI 347

Query: 367 FYFAIGI 373
            +  +G+
Sbjct: 348 LFQNVGL 354


>gi|67642420|ref|ZP_00441177.1| putative ABC transporter, permease protein [Burkholderia mallei GB8
           horse 4]
 gi|121598966|ref|YP_991583.1| putative ABC transporter, permease protein [Burkholderia mallei
           SAVP1]
 gi|126450485|ref|YP_001082718.1| putative ABC transporter, permease protein [Burkholderia mallei
           NCTC 10247]
 gi|251768288|ref|ZP_02270158.2| putative ABC transporter, permease protein [Burkholderia mallei
           PRL-20]
 gi|254357616|ref|ZP_04973890.1| putative ABC transporter, permease protein [Burkholderia mallei
           2002721280]
 gi|121227776|gb|ABM50294.1| putative ABC transporter, permease protein [Burkholderia mallei
           SAVP1]
 gi|126243355|gb|ABO06448.1| putative ABC transporter, permease protein [Burkholderia mallei
           NCTC 10247]
 gi|148026680|gb|EDK84765.1| putative ABC transporter, permease protein [Burkholderia mallei
           2002721280]
 gi|238523569|gb|EEP87007.1| putative ABC transporter, permease protein [Burkholderia mallei GB8
           horse 4]
 gi|243060282|gb|EES42468.1| putative ABC transporter, permease protein [Burkholderia mallei
           PRL-20]
          Length = 366

 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 183/375 (48%), Gaps = 18/375 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
              G TV R  G W +  ++    +V   I +  +      DLS +  +D +G + +   
Sbjct: 6   GSQGRTV-RLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALW-- 62

Query: 62  MEKYHGKIKLQGVSTHIEQ--LFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
             +  G+    G++    Q  +F  I      +   +   R      F    +  G+ + 
Sbjct: 63  --RVWGRRLPDGIALTDNQRVVFKRIERLDAGRESPEPVVRIDPVTRFGQGLFTFGEHLY 120

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR-QMYYVGVSGVPVVILISFVT 178
             I      A + GL++    +  A   + +    + I   +Y  G   +P+  L++F+ 
Sbjct: 121 GGI------ALLGGLIV----DLLAVLRRPRTMPWTEISANVYAAGTKALPITALVAFLI 170

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G V++   A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ 
Sbjct: 171 GIVLSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVT 230

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE+DA+R MG+     +  PR+ AL +++PLL +  N  A+ G ++       I    F 
Sbjct: 231 EELDAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFV 290

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
               S   +AN+F GL K       I +VA   GF +  +S SLG+  TT VV SI++VI
Sbjct: 291 RSLPSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVI 350

Query: 359 IIDSLFAIFYFAIGI 373
           + D++FAI +  +G+
Sbjct: 351 LADAVFAILFQNVGL 365


>gi|124386096|ref|YP_001027344.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10229]
 gi|124294116|gb|ABN03385.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10229]
          Length = 428

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 183/375 (48%), Gaps = 18/375 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
              G TV R  G W +  ++    +V   I +  +      DLS +  +D +G + +   
Sbjct: 68  GSQGRTV-RLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALW-- 124

Query: 62  MEKYHGKIKLQGVSTHIEQ--LFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
             +  G+    G++    Q  +F  I      +   +   R      F    +  G+ + 
Sbjct: 125 --RVWGRRLPDGIALTDNQRVVFKRIERLDAGRESPEPVVRIDPVTRFGQGLFTFGEHLY 182

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR-QMYYVGVSGVPVVILISFVT 178
             I      A + GL++    +  A   + +    + I   +Y  G   +P+  L++F+ 
Sbjct: 183 GGI------ALLGGLIV----DLLAVLRRPRTMPWTEISANVYAAGTKALPITALVAFLI 232

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G V++   A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ 
Sbjct: 233 GIVLSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVT 292

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE+DA+R MG+     +  PR+ AL +++PLL +  N  A+ G ++       I    F 
Sbjct: 293 EELDAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFV 352

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
               S   +AN+F GL K       I +VA   GF +  +S SLG+  TT VV SI++VI
Sbjct: 353 RSLPSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVI 412

Query: 359 IIDSLFAIFYFAIGI 373
           + D++FAI +  +G+
Sbjct: 413 LADAVFAILFQNVGL 427


>gi|187250741|ref|YP_001875223.1| ABC transporter-like protein [Elusimicrobium minutum Pei191]
 gi|186970901|gb|ACC97886.1| ABC transporter related [Elusimicrobium minutum Pei191]
          Length = 258

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 143/261 (54%), Gaps = 8/261 (3%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           IG++I+ F N+ C +A    ++ S       + +++       ++Q   +G++ + V  L
Sbjct: 5   IGREIIIFFNE-CGKA--FNMLRSCMFWLFKAPFEWA----QAMQQSVTIGINSLTVTTL 57

Query: 174 ISFVTGAVIAQQGAFQLSQFGAE-IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
            S  TG V+A QG   +S   +E +F   L+S   +RE+G +LTAV++ GR+G+A+ AEI
Sbjct: 58  TSIFTGMVLALQGGNTISNILSEPMFVGTLVSFSLIRELGPVLTAVVVVGRAGAAVTAEI 117

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           G+M++ E+IDA+ T+G + VR L+ PR++A ++++P+LT+ ANFS I G  +V      +
Sbjct: 118 GTMQVTEQIDALYTLGTNPVRQLVLPRMFAFMLTVPILTLFANFSGIFGGYLVAVHGLGV 177

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
           P   +     +     +   G IK+ F A  +G V   +G      +  +G+  T  VV 
Sbjct: 178 PDVTYLEDITNYMNTLDFMHGFIKSIFFAFMVGTVCCYKGLDTKGGAEGVGRSTTIAVVT 237

Query: 353 SISIVIIIDSLFAIFYFAIGI 373
           S+ +++++D        A GI
Sbjct: 238 SMVLILVLDYFLTAILTAFGI 258


>gi|325527206|gb|EGD04595.1| putative ABC transporter permease [Burkholderia sp. TJI49]
          Length = 351

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/215 (36%), Positives = 128/215 (59%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
            +Y  G   +P+  L++F+ G V++   A QL  FGA  + ++++ +  +RE+G +L+A+
Sbjct: 136 NIYSAGTQALPITALVAFLIGIVLSYLSAQQLQMFGANRYIVNILGLSVIRELGPVLSAI 195

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++AGRSGSAI A+IG M++ EE+DA+R MG+     LI PR+ AL I++PLL +  N  A
Sbjct: 196 LVAGRSGSAITAQIGVMRVTEELDAMRVMGIPHGLRLILPRVLALGIAMPLLVMWTNIIA 255

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           + G ++       I    F         +AN++ G+ K       I +VA   GF +  +
Sbjct: 256 LTGGALAAKLVLGIDVNYFVRSLPGVVPIANLYIGIGKGVVFGMLIALVACHFGFRIKAN 315

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           S SLG+  TT VV SI++VI+ D++FAI +  +G+
Sbjct: 316 SQSLGEGTTTSVVTSITVVILADAVFAILFQNVGL 350


>gi|223940090|ref|ZP_03631954.1| protein of unknown function DUF140 [bacterium Ellin514]
 gi|223891275|gb|EEF57772.1| protein of unknown function DUF140 [bacterium Ellin514]
          Length = 399

 Score =  124 bits (311), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 173/334 (51%), Gaps = 15/334 (4%)

Query: 42  VDLSAITEIDTIGAELIMYFMEK----YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97
           V+++ +T  D+ G    +Y + K       ++ L G+    ++     S    +  + ++
Sbjct: 75  VNVAPLTYSDSAGFAF-LYLLSKGCMTPQSQVSLNGLKPEYQKALQNYSMEDVQAYQGEQ 133

Query: 98  PQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLI 157
           P R       ++L   IG  ++    +   +   +G VIS  G         +     ++
Sbjct: 134 PVR-------QSLMDEIGMAVIAKTLEVRQKVIFVGDVISGLGYVLTHPRWMRRN--EIV 184

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           R     G + +P+V LIS + G VIA + A   ++FGA+I+  +L+ ++ +RE+  ++TA
Sbjct: 185 RIFETAGANALPIVSLISLLLGLVIAFEAAQPFARFGAKIYIANLIGLIMVRELSPVMTA 244

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +++AGRSGSA  AE+G+MK+NEE++A+ T+GLD +R L+  RI A ++  PLLTI +  +
Sbjct: 245 ILLAGRSGSAFAAELGTMKVNEELNALETIGLDPMRFLVVQRILASLLLTPLLTIYSMAT 304

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            ++G  +V+      P ++ + +  S+  + +I  G++KA      +   A   G     
Sbjct: 305 GVLGGVLVMLG-LGFPLSIAWHQLQSSVRINDIAFGILKAFVFGGIVAGTACLRGLETKS 363

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
              ++G+  T  VV  I ++II DS+FAI  F +
Sbjct: 364 GPAAVGESTTRSVVSGILLIIIADSVFAILKFVL 397


>gi|114328116|ref|YP_745273.1| ABC transporter permease [Granulibacter bethesdensis CGDNIH1]
 gi|114316290|gb|ABI62350.1| ABC transporter permease protein [Granulibacter bethesdensis
           CGDNIH1]
          Length = 392

 Score =  124 bits (311), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 125/218 (57%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+R +   G S + +V +++F+ G+++A  GA QL +F A+I+  +L+ +  +RE+  ++
Sbjct: 175 LLRDISDAGPSALLIVGIVNFLMGSILAFVGAVQLRKFAADIYVANLVGLASVREMSAVM 234

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA+++AGR+G A  A I +M  NEEIDA+R  G+   R L+ P I AL++++P+L + A 
Sbjct: 235 TAIIMAGRTGGAYAARIATMTGNEEIDALRVFGIPVSRYLLLPSIAALVLTMPILYLYAC 294

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             +++G  IV     D+  A F++    +  +     G +K    A  IG+V+ + G   
Sbjct: 295 LISLVGGYIVSQGMLDVTMAGFWNHLFGSVHIDQFVFGFVKTITFAMLIGLVSCRIGLKA 354

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           G  +  +G   T  VV  I  VI +DS+FA+    IGI
Sbjct: 355 GRSAADVGVAATRAVVSGIVGVIALDSMFAVLATIIGI 392


>gi|295675321|ref|YP_003603845.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1002]
 gi|295435164|gb|ADG14334.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1002]
          Length = 389

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 186/382 (48%), Gaps = 40/382 (10%)

Query: 8   VFRFAGNWKSPEISEIADDV-VMAINKSIQSDSAI--VDLSAITEIDTIGAE-LIMYFME 63
           + R +G W +  ++   D   V+   +S+     I   DLS +  +D +G + L   +  
Sbjct: 31  IVRLSGQWTALALARDRDTGHVIPQLRSLTGAQGIGGWDLSRVDSMDHVGGQALWRVWGR 90

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           K      L      I +  +L+        ++ +P   F  + F  L    G  I  F+ 
Sbjct: 91  KLPPGTALTDTQRDIFERIALLDTVR----ESAEPVTRF--DPFTRL----GLGIFSFVE 140

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ------------MYYVGVSGVPVV 171
                  +LG V+ +              LL+++R+            +Y  G   +P+ 
Sbjct: 141 HMQGGVAMLGRVVLD--------------LLAILRKPKLTPWTEISANIYNAGARALPIT 186

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
            L++F+ G V++   A QL  FGA  F ++++ +  +RE+G +L+A+++AGRSGSAI A+
Sbjct: 187 ALVAFLIGIVLSYLSAQQLRIFGANQFIVNILGLAVIRELGPVLSAILVAGRSGSAITAQ 246

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           IG M++ EE+DA+R MG+     LI PR+ AL +++PLL +  N  ++ G ++       
Sbjct: 247 IGVMRVTEELDAMRVMGIPHGLRLILPRVIALAVAMPLLVMWTNVISLTGGALAAKLVLG 306

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
           I  + F  +      +AN++ GL K       I I     GF +  +S SLG+  TT VV
Sbjct: 307 IDMSFFARQLPVVVPIANLWIGLGKGAVFGMLIAIAGCHFGFRIKANSQSLGEGTTTSVV 366

Query: 352 QSISIVIIIDSLFAIFYFAIGI 373
            SI+IVI+ D++FAI +  +G+
Sbjct: 367 TSITIVILADAVFAILFQNVGL 388


>gi|91781621|ref|YP_556827.1| ABC transporter inner membrane protein [Burkholderia xenovorans
           LB400]
 gi|91685575|gb|ABE28775.1| Putative ABC transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
          Length = 377

 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/215 (36%), Positives = 128/215 (59%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
            +Y  G   +P+  L++F+ G V++   A QL  FGA  + ++++ +  +RE+G +L+A+
Sbjct: 162 NVYNAGTQALPITALVAFLIGIVLSYLSAQQLRLFGANQYIVNILGLSVIRELGPVLSAI 221

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++AGRSGSAI A+IG M++ EE+DA+R MG+     LI PR+ AL +++PLL +  N  A
Sbjct: 222 LVAGRSGSAITAQIGVMRVTEELDAMRVMGIPHGLRLILPRVLALGVAMPLLVMWTNIIA 281

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           + G ++       I  + F         +AN++ GL K       I IV    GF +  +
Sbjct: 282 LTGGALAARIVLGIDMSYFARALPGVVPVANLWIGLGKGVVFGMLIAIVGCHFGFRIKAN 341

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           S SLG+  TT VV SI+IVI+ D++FAI +  +G+
Sbjct: 342 SQSLGEGTTTSVVTSITIVILADAVFAILFQNVGL 376


>gi|296160361|ref|ZP_06843178.1| protein of unknown function DUF140 [Burkholderia sp. Ch1-1]
 gi|295889342|gb|EFG69143.1| protein of unknown function DUF140 [Burkholderia sp. Ch1-1]
          Length = 377

 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/215 (36%), Positives = 128/215 (59%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
            +Y  G   +P+  L++F+ G V++   A QL  FGA  + ++++ +  +RE+G +L+A+
Sbjct: 162 NVYNAGTQALPITALVAFLIGIVLSYLSAQQLRLFGANQYIVNILGLSVIRELGPVLSAI 221

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++AGRSGSAI A+IG M++ EE+DA+R MG+     LI PR+ AL +++PLL +  N  A
Sbjct: 222 LVAGRSGSAITAQIGVMRVTEELDAMRVMGIPHGLRLILPRVLALGVAMPLLVMWTNIIA 281

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           + G ++       I  + F         +AN++ GL K       I IV    GF +  +
Sbjct: 282 LTGGALAAKIVLGIDMSYFARALPGVVPVANLWIGLGKGVVFGMLIAIVGCHFGFRIKAN 341

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           S SLG+  TT VV SI+IVI+ D++FAI +  +G+
Sbjct: 342 SQSLGEGTTTSVVTSITIVILADAVFAILFQNVGL 376


>gi|167561346|ref|ZP_02354262.1| ABC transporter, permease protein [Burkholderia oklahomensis EO147]
 gi|167568578|ref|ZP_02361452.1| ABC transporter, permease protein [Burkholderia oklahomensis C6786]
          Length = 374

 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 181/376 (48%), Gaps = 35/376 (9%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           R  G W +  ++    +V   I +  +      DLS +  +D +G + +     +  G+ 
Sbjct: 21  RLYGQWTALALARDRGNVARRIARLAKEPVGEWDLSGVVRLDHVGGQALW----RVWGRR 76

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
             +G++    Q  ++     R     + P+     +         G+ +  F        
Sbjct: 77  LPEGLALTDNQ-RTVFERIERLDEGREAPEPVVRIDPIT----RFGQGLFTFGEHLYGGI 131

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQ------------MYYVGVSGVPVVILISFV 177
            +LG ++ +              LLS++R+            +Y  G   +P+  L++F+
Sbjct: 132 GLLGRLVID--------------LLSVLRRPRTMPWTEISANVYAAGAKALPITALVAFL 177

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V++   A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++
Sbjct: 178 IGIVLSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRV 237

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EE+DA+R MG+     +  PR+ AL +++PLL +  N  A+ G ++       I    F
Sbjct: 238 TEELDAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLAIDLNFF 297

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                S   +AN++ GL K       I +VA   GF +  +S SLG+  TT VV SI++V
Sbjct: 298 VRSLPSVVPIANLWIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVV 357

Query: 358 IIIDSLFAIFYFAIGI 373
           I+ D++FAI +  +G+
Sbjct: 358 ILADAVFAILFQNVGL 373


>gi|167835250|ref|ZP_02462133.1| ABC transporter, permease protein [Burkholderia thailandensis
           MSMB43]
          Length = 281

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/215 (36%), Positives = 128/215 (59%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
            +Y  G   +P+  L++F+ G V++   A QL  FGA  + ++++ +  +RE+G +L+A+
Sbjct: 66  NVYAAGAKALPITALVAFLIGIVLSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAI 125

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++AGRSGSAI A+IG M++ EE+DA+R MG+     +  PR+ AL +++PLL +  N  A
Sbjct: 126 LVAGRSGSAITAQIGVMRVTEELDAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIA 185

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           + G ++       I    F     S   +AN+F GL K       I +VA   GF +  +
Sbjct: 186 LTGGALAAKFVLGIDLNFFVRSLPSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKAN 245

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           S SLG+  TT VV SI++VI+ D++FAI +  +G+
Sbjct: 246 SQSLGEGTTTSVVTSITVVILADAVFAILFQNVGL 280


>gi|85858103|ref|YP_460305.1| organic solvents resistance ABC transporter permease [Syntrophus
           aciditrophicus SB]
 gi|85721194|gb|ABC76137.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Syntrophus aciditrophicus
           SB]
          Length = 284

 Score =  123 bits (309), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 147/280 (52%), Gaps = 17/280 (6%)

Query: 90  RKKIKNQKPQRSFFYNSFKNLHY---HIGKKIVKFINDSCSQAHILGLVISNTGEFCASS 146
           R  I+    +++  +N+ + L +    +G+ ++ +IN+S       G             
Sbjct: 6   RPDIQESSEEKAG-WNAIRLLSWPFAQLGRSVISWINNS-------GAAAIFLLLAALKI 57

Query: 147 YKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206
           ++ +  L+ + +Q+YY+G     +++L+   TG V+  Q    L Q GAE     L+++ 
Sbjct: 58  FRPRQ-LMKITQQIYYIGARSTMIIMLVGLFTGMVLGLQSYHALVQVGAEGALGTLVALS 116

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            +RE+G +LTA+MI  R+GSAI A+IG  +I+E+IDA+ TM +D +R LISPRI A IIS
Sbjct: 117 LIRELGPVLTAIMITARAGSAITAQIGIERISEQIDALDTMHIDPLRYLISPRIAAAIIS 176

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326
            P+LT L +   I+G+ I            FF R  S+  ++++  G IKA   A  +  
Sbjct: 177 FPVLTALFDLIGILGSYISGVLIMGANAGTFFHRVQSSVEMSDVNEGFIKAIVFAVIVST 236

Query: 327 VAMKEGFAVGVHSNSLGKK-----VTTCVVQSISIVIIID 361
           V   +G+   +  +S G K      T+ VV S  ++++ D
Sbjct: 237 VCCYQGYFAHMRPDSHGAKAVGLSTTSAVVLSCVLILVSD 276


>gi|187922498|ref|YP_001894140.1| hypothetical protein Bphyt_0491 [Burkholderia phytofirmans PsJN]
 gi|187713692|gb|ACD14916.1| protein of unknown function DUF140 [Burkholderia phytofirmans PsJN]
          Length = 377

 Score =  123 bits (309), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 183/371 (49%), Gaps = 18/371 (4%)

Query: 8   VFRFAGNWKSPEIS-EIADDVVMAINKSIQSDSAI--VDLSAITEIDTIGAE-LIMYFME 63
           + R +G W +  ++ + A   V+ + +S+     I   DLS I  +D +G + L   +  
Sbjct: 19  IVRLSGQWTALALARDRATGHVIPLLRSLVGAEGIGQWDLSRIDRMDHVGGQALWRVWGH 78

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           K      L      I +  +L+          +K +    ++    L    G  I  F  
Sbjct: 79  KMPPDTTLTDTQRDIFERIALLDTVR------EKAEPVIRFDPLTRL----GLAIFSFFE 128

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR-QMYYVGVSGVPVVILISFVTGAVI 182
                  +LG V+    +  A + K K    + I   +Y  G   +P+  L++F+ G V+
Sbjct: 129 HLYGGVAMLGRVVL---DLLAIARKPKITPWTEISANIYNAGTKALPITALVAFLIGIVL 185

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           +   A QL  FGA  + ++++ +  +RE+G +L A+++AGRSGSAI A+IG M++ EE+D
Sbjct: 186 SYLSAQQLRLFGANQYIVNILGLSVIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELD 245

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R MG+     LI PR+ AL +++PLL +  N  A+ G ++       I  + F     
Sbjct: 246 AMRVMGIPHGLRLILPRVVALGVAMPLLVMWTNIIALTGGALAAKIALGIDMSYFARALP 305

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               +AN++ GL K       I IV    GF +  +S SLG+  TT VV SI+IVI+ D+
Sbjct: 306 GVVPVANLWIGLGKGVAFGMLIAIVGCHFGFRIKANSQSLGEGTTTSVVTSITIVILADA 365

Query: 363 LFAIFYFAIGI 373
           +FAI +  +G+
Sbjct: 366 VFAILFQNVGL 376


>gi|239906932|ref|YP_002953673.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
 gi|239796798|dbj|BAH75787.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
          Length = 269

 Score =  123 bits (309), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 125/217 (57%), Gaps = 5/217 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +++Q+Y++GV  + V+ LI   TG V+  QG + L +FG+E      +++  +RE+G +L
Sbjct: 51  IVQQVYFIGVKSIFVIALIGLFTGMVLGLQGYYTLVKFGSEGLLGAAVALSIIRELGPVL 110

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA+MI GR+GS++ AE+G M+I+E+IDA+ TM ++ +R L++PR+ A +I  PLLT + +
Sbjct: 111 TAIMITGRAGSSMAAELGIMRISEQIDALSTMDINPMRFLVAPRLAASLICFPLLTAIFD 170

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              I+G  +       I   V+F R  +T  LA++  G +K+   A  + ++   EG+  
Sbjct: 171 VVGILGGYLSGCVLLGINPGVYFDRIDATVELADVTGGFVKSVVFALLVAVICCYEGYFT 230

Query: 336 GVHSNSLGKK-----VTTCVVQSISIVIIIDSLFAIF 367
                  G K      T+ VV S  ++++ D +   F
Sbjct: 231 HARQGGFGAKGVSLATTSAVVLSCVVILVADYVLTSF 267


>gi|330822969|ref|YP_004386272.1| hypothetical protein Alide2_0328 [Alicycliphilus denitrificans
           K601]
 gi|329308341|gb|AEB82756.1| protein of unknown function DUF140 [Alicycliphilus denitrificans
           K601]
          Length = 372

 Score =  123 bits (309), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 125/214 (58%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
            +Y +G   + +  L+ F+ G V+A   + QL QFGAE F ++++ I  +RE+G +L A+
Sbjct: 158 HVYQMGAKALHITALVGFLIGVVLAYLMSLQLRQFGAEAFIVNILGISLIRELGPMLGAI 217

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++AGRSGSAI A+IG M++ EE+DA+R MG+     L+ PR  AL +++PL+ +    +A
Sbjct: 218 LVAGRSGSAITAQIGVMRVTEELDAMRVMGIAHGFRLVMPRALALGLAMPLIALWTTLAA 277

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           + G  +       I  A F     +   ++N++  + K+      I ++    G  V  +
Sbjct: 278 LAGGMLAADLTMGISSAYFLQALPAAVKVSNLWLAMAKSVVFGVFIALIGCHWGLRVKPN 337

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           + SLG+  T  VV +I++VI++D+LFA+ +  +G
Sbjct: 338 TQSLGEGTTASVVSAITMVIVVDALFAVAFKNLG 371


>gi|121607910|ref|YP_995717.1| hypothetical protein Veis_0920 [Verminephrobacter eiseniae EF01-2]
 gi|121552550|gb|ABM56699.1| protein of unknown function DUF140 [Verminephrobacter eiseniae
           EF01-2]
          Length = 374

 Score =  123 bits (309), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 181/365 (49%), Gaps = 17/365 (4%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIV----DLSAITEIDTIGAELIMYFMEKYHGK 68
           G W + E+   A     A++  ++   A+     DL A+  +D +GA+L+    ++   +
Sbjct: 23  GRWGAAELGNAAQ--WQALSGQLRKHPAVPTLGWDLRALQWLDHVGAQLLWNHWQRAWPQ 80

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
            +L    +    L  +  F+         P   +   +  +   H+G  ++  +  +   
Sbjct: 81  -QLACTDSQRSMLARVAQFS-----TTAPPPAPWRLAAQVD---HLGLLVLHGVEHARHI 131

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             +LG ++ +      +  +  G    +   +Y +G + +P+  L+ F+ G V+A   + 
Sbjct: 132 LEMLGQLVLDLARLARAPRR--GPWRDVSGHLYRMGATALPITALVGFLIGVVLAYLMSL 189

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           QL QFGAE F ++++ I  +RE+G +L A+++AGRSGSAI A+IG M++ EE+DA+R MG
Sbjct: 190 QLRQFGAESFIVNILGISLIRELGPMLAAILVAGRSGSAITAQIGVMRVTEELDAMRVMG 249

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +     L+ PR  AL +++PLL++    +A+ G  +       I  A F     +     
Sbjct: 250 IAHGFRLVLPRTLALALAMPLLSLWTTLAALAGGMLAADLTMGISPAYFAQALPAAVRPG 309

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           N+   + K+      I ++    G  V   + SLG+  T  VV +I++VI++D+LFA+ +
Sbjct: 310 NLGLAMAKSVVFGAGIALIGCHWGLRVRPDTQSLGEGTTASVVSAITMVIVVDALFAVTF 369

Query: 369 FAIGI 373
             IGI
Sbjct: 370 KTIGI 374


>gi|319761111|ref|YP_004125048.1| hypothetical protein Alide_0383 [Alicycliphilus denitrificans BC]
 gi|317115672|gb|ADU98160.1| protein of unknown function DUF140 [Alicycliphilus denitrificans
           BC]
          Length = 388

 Score =  123 bits (309), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 125/214 (58%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
            +Y +G   + +  L+ F+ G V+A   + QL QFGAE F ++++ I  +RE+G +L A+
Sbjct: 174 HVYQMGAKALHITALVGFLIGVVLAYLMSLQLRQFGAEAFIVNILGISLIRELGPMLGAI 233

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++AGRSGSAI A+IG M++ EE+DA+R MG+     L+ PR  AL +++PL+ +    +A
Sbjct: 234 LVAGRSGSAITAQIGVMRVTEELDAMRVMGIAHGFRLVMPRALALGLAMPLIALWTTLAA 293

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           + G  +       I  A F     +   ++N++  + K+      I ++    G  V  +
Sbjct: 294 LAGGMLAADLTMGISSAYFLQALPAAVKVSNLWLAMAKSVVFGVFIALIGCHWGLRVKPN 353

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           + SLG+  T  VV +I++VI++D+LFA+ +  +G
Sbjct: 354 TQSLGEGTTASVVSAITMVIVVDALFAVAFKNLG 387


>gi|307728301|ref|YP_003905525.1| hypothetical protein BC1003_0230 [Burkholderia sp. CCGE1003]
 gi|307582836|gb|ADN56234.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1003]
          Length = 389

 Score =  123 bits (308), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 79/215 (36%), Positives = 128/215 (59%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
            +Y  G   +P+  L++F+ G V++   A QL  FGA  + ++++ +  +RE+G +L+A+
Sbjct: 174 NIYNAGTRALPITALVAFLIGIVLSYLSAQQLRLFGANQYIVNILGLSVIRELGPVLSAI 233

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++AGRSGSAI A+IG M++ EE+DA+R MG+     LI PR+ AL +++PLL +  N  A
Sbjct: 234 LVAGRSGSAITAQIGVMRVTEELDAMRVMGIPHGLRLILPRVVALGVAMPLLVMWTNIIA 293

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           + G ++       I  + F         +AN++ GL K       I IV    GF +  +
Sbjct: 294 LTGGAVAAKIVLGIDMSYFARALPGVVPVANLWIGLGKGVAFGMLIAIVGCHFGFRIKAN 353

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           S SLG+  TT VV SI+IVI+ D++FAI +  +G+
Sbjct: 354 SQSLGEGTTTSVVTSITIVILADAVFAILFQNVGL 388


>gi|258404804|ref|YP_003197546.1| hypothetical protein Dret_0676 [Desulfohalobium retbaense DSM 5692]
 gi|257797031|gb|ACV67968.1| protein of unknown function DUF140 [Desulfohalobium retbaense DSM
           5692]
          Length = 256

 Score =  123 bits (308), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 137/256 (53%), Gaps = 7/256 (2%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           +G   ++ +      A +LG   S  G      ++ + F     +QM +VGV    VVIL
Sbjct: 8   LGAGTMRGLQQMGQMALLLG---SACGWLLRRPFRIRLFF----KQMEFVGVHSGFVVIL 60

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
               TG V+A Q  +    F AE      +++   RE+G ++TA+M+ GR+GSA+ AEIG
Sbjct: 61  TGLFTGMVLALQTYYAFRMFSAESLVGATVALSMTRELGPVITALMVTGRAGSAMAAEIG 120

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           +M++ E++DA+  M ++ V+ L++PR+ A ++ LPLLT++++F  I G  +V  K   I 
Sbjct: 121 TMRVTEQVDALEVMAINPVQYLVTPRLLAGMVMLPLLTVISDFVGIAGGYLVGVKMLGIN 180

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
            ++F ++ +    L++I+ GL KA      + +V   +GF     +  +G+  T  VV +
Sbjct: 181 SSMFMNKIYDLLELSDIYNGLTKAVVFGLILTLVGCYKGFYTSGGAEGVGRSTTQAVVLA 240

Query: 354 ISIVIIIDSLFAIFYF 369
             ++++ D +     F
Sbjct: 241 SVLILMSDYILTALMF 256


>gi|283853085|ref|ZP_06370341.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B]
 gi|283571552|gb|EFC19556.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B]
          Length = 274

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 74/217 (34%), Positives = 123/217 (56%), Gaps = 5/217 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +++Q+Y++GV  V V++LI   TG V+  QG + L +FG+E      +++  +RE+G +L
Sbjct: 56  IVQQVYFIGVKSVFVIVLIGLFTGMVLGLQGYYTLVKFGSEGLLGAAVALSIIRELGPVL 115

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA+MI GR+GS++ AEIG M+I+E+IDA+ TMG++ +R LI+PR+ A ++  PLLT + +
Sbjct: 116 TAIMITGRAGSSMAAEIGIMRISEQIDALSTMGINPLRFLIAPRLAASLVCFPLLTAIFD 175

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              I G  +       I   V+F R  ST  L ++  G +K+   A  +  +   EG+  
Sbjct: 176 VVGIGGGYLTGVVLLGINPGVYFDRIDSTVELGDVTGGFVKSLVFALLVAAICCFEGYFT 235

Query: 336 GVHSNSLGKK-----VTTCVVQSISIVIIIDSLFAIF 367
                  G K      T+ VV S   +++ D +   F
Sbjct: 236 HTRREGFGAKGVSLATTSAVVLSCITILVADYVLTSF 272


>gi|315122739|ref|YP_004063228.1| ABC transporter [Candidatus Liberibacter solanacearum CLso-ZC1]
 gi|313496141|gb|ADR52740.1| ABC transporter [Candidatus Liberibacter solanacearum CLso-ZC1]
          Length = 147

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 58/102 (56%), Positives = 76/102 (74%), Gaps = 1/102 (0%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           SENG+ VFR  G+W+S EIS+I+  +++ INKS Q D AIVDL  ITEIDTIG   I+YF
Sbjct: 18  SENGVKVFRLTGSWRSAEISKISKGILITINKSTQEDLAIVDLLEITEIDTIGVATIIYF 77

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFF 103
            EKY GKI+LQG++ H+EQLFS++S     K+K QK Q+ +F
Sbjct: 78  TEKYRGKIQLQGMTAHMEQLFSIMSLNPNNKLK-QKNQKIYF 118


>gi|283852492|ref|ZP_06369760.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B]
 gi|283572100|gb|EFC20092.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B]
          Length = 256

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 118/206 (57%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
            M ++G   +P++ +IS   G ++A Q A QL + GA  +  +L+    + E+G LLT +
Sbjct: 43  HMAWIGADSLPIISIISACVGIILALQAATQLEKVGALSYVANLVGFSIITELGPLLTCL 102

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++AGR+G+A  AEI +M+I+EEIDA+  MGLD VR L+ P+  A+ +  PLLT+  +   
Sbjct: 103 ILAGRAGAAFTAEIATMQISEEIDALEVMGLDPVRFLVWPKFLAMCVMAPLLTLWGDAVG 162

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           I    +    +  +    +F +     T+ ++  GL+K+     AI IV+  +GF     
Sbjct: 163 ITAGGVFSALFLGLAGKAYFLQTAHFLTMRDLLAGLVKSAGFGVAITIVSCWQGFLAKEG 222

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLF 364
           +  +G++ T  VV+SI ++I++D  F
Sbjct: 223 AADVGRRTTKAVVESIFLMILLDLFF 248


>gi|288817534|ref|YP_003431881.1| ABC transporter permease protein [Hydrogenobacter thermophilus
           TK-6]
 gi|288786933|dbj|BAI68680.1| ABC transporter permease protein [Hydrogenobacter thermophilus
           TK-6]
 gi|308751137|gb|ADO44620.1| protein of unknown function DUF140 [Hydrogenobacter thermophilus
           TK-6]
          Length = 245

 Score =  121 bits (304), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 116/209 (55%)

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           L   I Q+ Y+G   VPVV++ S  +G VIA Q      +F AE     +++I   RE+G
Sbjct: 29  LRHFISQLAYLGAETVPVVVITSIFSGGVIALQTYSTFHRFNAEFLIGAVVAISMGRELG 88

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            +L ++M+  R GSA+ A IG+M+I E+IDA+  MG++ V  L+SPR++A ++ +P+L I
Sbjct: 89  PVLASLMVVARVGSAMTASIGTMRITEQIDALEVMGINPVSYLVSPRVFAGVLGVPMLVI 148

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           LA+ + + G   V  K + +   +F+ +    A   +   GL KA F    I  V+   G
Sbjct: 149 LADIAGVFGGWFVAVKLFGVNEYLFWEKMRDIAEFYDFIGGLYKAVFFGLIISAVSCYFG 208

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           F  G  +  +G+  T  VV S  +++I D
Sbjct: 209 FYTGGGTEGVGRATTNSVVVSSMLILISD 237


>gi|116749843|ref|YP_846530.1| hypothetical protein Sfum_2414 [Syntrophobacter fumaroxidans MPOB]
 gi|116698907|gb|ABK18095.1| protein of unknown function DUF140 [Syntrophobacter fumaroxidans
           MPOB]
          Length = 384

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 185/379 (48%), Gaps = 42/379 (11%)

Query: 13  GNWKSPEISEIADDV--VMAINKSIQSDSAIVDLSAIT-EIDTIGAELIMYFMEKYHGKI 69
           GNW+      IAD+   V AI +  +SD  I  L+  T E+    + L+ + ++     +
Sbjct: 30  GNWR------IADEPIPVDAIIREFESDPRIRILAFDTGELGEWDSSLLTFLIKVIDTGV 83

Query: 70  KL------QGVSTHIEQLFSLIS-FTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           +        G+   + +L SL S        + Q+ ++ F           +G + +   
Sbjct: 84  RRGLEADRTGLPEGVGRLLSLASAVPEATDARRQEAKQPFLT--------RVGTQAI--- 132

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKF-KGF-------LLSLIRQMYYVGVSGVPVVILI 174
               S A  +G ++   GE   + ++  +G        L++LI+     G   +P+V LI
Sbjct: 133 ----SLAAAVGQMMEFLGEAAIAFFQLVRGRARLRRVDLMTLIQD---CGADALPIVSLI 185

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           S + G ++A  GA QL  FGA+I+  DL+ +   RE+G ++TAV++AGR+G+A  A++G+
Sbjct: 186 SVLVGLILAFVGAVQLRMFGAQIYVADLVGLGMAREMGAMMTAVIMAGRTGAAFAAQLGT 245

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           M++NEEIDA++T+G+  +  L+ PR+ AL++ +P L + A+   I+G  IV      +  
Sbjct: 246 MQVNEEIDALQTLGVSPMEFLVLPRMLALVLMMPFLCLYADLMGILGGGIVGVGMLGLSP 305

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
             ++        L +   GLIK       I +     G   G  S ++G   T+ VV  I
Sbjct: 306 LEYYHETVQAVGLMDFGAGLIKGAVFGVLIALSGCLRGMQCGRSSAAVGLATTSAVVTGI 365

Query: 355 SIVIIIDSLFAIFYFAIGI 373
             +++ D++  + Y  +GI
Sbjct: 366 VAIVVSDAILTVIYDRLGI 384


>gi|251771480|gb|EES52057.1| putative integral membrane protein [Leptospirillum
           ferrodiazotrophum]
          Length = 253

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 120/212 (56%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
            Q+  +G     VV++ +F TG V+A Q      +F AE     ++++   RE+G ++T+
Sbjct: 42  EQLLRIGADSTLVVVVTAFFTGMVLALQAWIGFRKFNAEGLVGAVVTLSMTRELGPVITS 101

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +M+ GRSGSA+ AE+GSM+++E+IDA+ T+ +D V  L++PR++A +++LPLLT LA+  
Sbjct: 102 LMVTGRSGSAMAAELGSMRVSEQIDALETLAVDPVDYLVTPRLYASLVALPLLTALADLV 161

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            I G  +V  K   +   ++F        L +  +G++K+ F    + + A + GF    
Sbjct: 162 GIGGGYVVAVKLLGLSPHLYFQEISHYVDLHDFISGIVKSVFFGGLLALWACRTGFVASG 221

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
            +  +G+ VT  VV     ++++D     + F
Sbjct: 222 GAAGVGRAVTFAVVSGSMSILVVDYFLTAWLF 253


>gi|78222485|ref|YP_384232.1| hypothetical protein Gmet_1271 [Geobacter metallireducens GS-15]
 gi|78193740|gb|ABB31507.1| protein of unknown function DUF140 [Geobacter metallireducens
           GS-15]
          Length = 255

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 139/254 (54%), Gaps = 15/254 (5%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGF---LLSLIRQMYYVGVSGVP 169
            +GK+++ F N+   +  +L          C + + F+     +LS+  QM  +G   +P
Sbjct: 4   RVGKRVIAF-NEIVGEMVML---------LCQTVWFFREAPRNILSIFTQMSIIGYETLP 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +  +++F  G V+A Q   +L ++G +     ++ +  +RE+G ++T+ ++AGR+GSA+ 
Sbjct: 54  MASVMAFFVGMVLALQTGAELQKYGTQNIIGGIVGLSMVRELGPVMTSFLVAGRAGSAMA 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV--IW 287
           AEIG MK+ EEIDA++T+ ++ VR L  PR+ A +I +P L I A+F  I+G +++  + 
Sbjct: 114 AEIGVMKVYEEIDALKTLDINPVRYLAMPRLIACLICVPALVIYADFVGILGGALLSHLH 173

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
               I ++ ++   ++   L  I  GL+KA    C IG+V+   GF     +  + +  T
Sbjct: 174 PKIFISYSTYYDSLNTALKLKEIGAGLLKATVFGCIIGVVSCYTGFKTTGGARGIAQSTT 233

Query: 348 TCVVQSISIVIIID 361
             VV S  +++  D
Sbjct: 234 RAVVLSFMLILAAD 247


>gi|83594240|ref|YP_427992.1| hypothetical protein Rru_A2908 [Rhodospirillum rubrum ATCC 11170]
 gi|83577154|gb|ABC23705.1| Protein of unknown function DUF140 [Rhodospirillum rubrum ATCC
           11170]
          Length = 275

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/221 (34%), Positives = 131/221 (59%), Gaps = 3/221 (1%)

Query: 148 KFKG---FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204
           +F+G    L +++ Q   +G+  +P+V++++F  G ++A QG + L  FGAE   +  ++
Sbjct: 50  RFRGQPVRLGAIVEQAMEMGIRALPIVLVMNFTIGMMLAIQGIYSLRMFGAEQQVVLGVA 109

Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264
              +RE   L+T +++AGRSGSAI A +G+M IN+EIDA+  MG+  VR L++P + A +
Sbjct: 110 FSVVREFAPLITGILVAGRSGSAIAARLGTMTINQEIDALTVMGIVPVRYLVAPPLIAAL 169

Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI 324
           + +PL+T L    A++GAS+ +     +  + FF +      L ++  GL K+   A  I
Sbjct: 170 VMVPLMTFLGMLVALLGASLTVRIDLGMSLSAFFHQTLDILRLIDLTHGLGKSALFALQI 229

Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            +V +  G +V   +  +GK  T  VVQ+IS +I+ D +FA
Sbjct: 230 VLVGVVNGVSVSGGAEGVGKMTTRSVVQAISAIIVTDMVFA 270


>gi|320107063|ref|YP_004182653.1| hypothetical protein AciPR4_1853 [Terriglobus saanensis SP1PR4]
 gi|319925584|gb|ADV82659.1| protein of unknown function DUF140 [Terriglobus saanensis SP1PR4]
          Length = 259

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 75/215 (34%), Positives = 119/215 (55%), Gaps = 2/215 (0%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           QM  +G   +P+VIL  F TG V+A Q A  L QFGA   +  L+++  ++E+G +LT +
Sbjct: 44  QMDSIGFGSLPIVILAGFFTGCVLALQSATALQQFGAVSKTGSLVALSMVKELGPVLTGL 103

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           M++GR+ S I +E+GSM++ E+IDA+R +G D VR L+ PRI A +I L  L+IL+    
Sbjct: 104 MVSGRNASGIASELGSMRVTEQIDAMRALGTDPVRKLVLPRIAATVIMLAFLSILSAAMG 163

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           I G ++V      +  + +F   +++    ++  GL+K  F    I  V    G      
Sbjct: 164 IAGGALVSVALLGLNSSAYFHSSYASLVYGDVVQGLVKPVFFGFIIASVGCYFGMTTKGG 223

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           +  +GK  T  VV S   +I++D  F +    IGI
Sbjct: 224 TQGVGKSTTQAVVISSVCIIVVD--FLLTRLMIGI 256


>gi|296532685|ref|ZP_06895378.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Roseomonas cervicalis ATCC 49957]
 gi|296266987|gb|EFH12919.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Roseomonas cervicalis ATCC 49957]
          Length = 278

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 140/259 (54%), Gaps = 3/259 (1%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           IG   V  + D  +    LG  +  T        + +  +  L+R +   G+   P+ +L
Sbjct: 22  IGAWAVAVLRDVRAATGFLGEAVVMTLSLLPRPRRLR--VGDLLRHLDEAGLRAFPLTLL 79

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           +  + G ++A Q +  + Q+GAEI+   L+ I  LRE+G L+ A+++AGR+GSA  AE+G
Sbjct: 80  LGLLIGVILAFQSSIPMRQYGAEIYIPSLVGISLLRELGPLIAAIILAGRTGSAFAAELG 139

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           +M +NEE+DA+R MG+D + +L+ PR+ A ++ +P+LT+L N S +IG   V+      P
Sbjct: 140 TMTVNEEVDALRIMGIDPMVMLVLPRLIAAMLVMPVLTLLMNLSGLIGMGTVM-GALGFP 198

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
            A+  ++     TL  +  GL K+      +  +  + G + G    ++G   T  VV  
Sbjct: 199 AALVINQLSYWLTLGTLLGGLGKSVVFGLVVAGIGCRAGLSAGRGPRAVGDAATAAVVGG 258

Query: 354 ISIVIIIDSLFAIFYFAIG 372
           I   +++D LFA+ ++ +G
Sbjct: 259 IVSTVVLDGLFAVLFYRLG 277


>gi|308272145|emb|CBX28752.1| UPF0393 membrane protein RBE_1340 [uncultured Desulfobacterium sp.]
          Length = 288

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 121/211 (57%), Gaps = 5/211 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +++Q++++G   V V+ L    TG V+  QG   L +FG+  F   ++++  +RE+G +L
Sbjct: 70  ILQQIHFIGSKSVFVICLTGAFTGMVLGLQGYHTLVKFGSAGFLGAVVALSLIRELGPVL 129

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A+M+ GR+GSAI AE+G M+I+EEIDA+ TM ++ +R L+SP++ A +IS+PLLT L +
Sbjct: 130 AAIMVTGRAGSAIAAEVGIMRISEEIDALDTMDINPLRFLVSPKLAAALISMPLLTALFD 189

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              IIG  I       I   ++FSR  ++  +A++  G IK+   A  I  V   +G+  
Sbjct: 190 VVGIIGGYISGSLLLGISGGIYFSRIETSVEMADVTGGFIKSLVFAAVIVTVCCFQGYYT 249

Query: 336 GVHSNSLGKK-----VTTCVVQSISIVIIID 361
                  G K      T+ VV S   ++I D
Sbjct: 250 HTRKEGFGAKGVSLSTTSAVVISCVTILITD 280


>gi|149200416|ref|ZP_01877432.1| ABC-type transport system, permease component [Lentisphaera
           araneosa HTCC2155]
 gi|149136485|gb|EDM24922.1| ABC-type transport system, permease component [Lentisphaera
           araneosa HTCC2155]
          Length = 265

 Score =  120 bits (300), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 134/261 (51%), Gaps = 2/261 (0%)

Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167
           KNL    G+  V F  +S +    +G V         + +K K    S +  M   G   
Sbjct: 2   KNLVSSFGRNFVGFFQESKNILAFIGEVTEELIFGIRNPHKIK--WKSTLYYMDGCGREA 59

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
             +V LI F+ G ++  Q A Q+ QFG +I+  +L+ +  ++E+G L+ A++  GR+GSA
Sbjct: 60  TGIVALICFLMGLILGFQSAVQMKQFGTDIYVANLVGLSIVKELGPLMVAMIATGRAGSA 119

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
             AE+G+M++NEEIDA+ TMG    R LI P++ A+++ +P+LT++ +   I+G   V  
Sbjct: 120 FAAELGTMRVNEEIDALTTMGFVPPRFLIIPKLIAMMVVMPILTLIGDLLGILGGFFVGV 179

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
               +PF  + ++        ++   + KA   A  I +V    G      +  +GK  T
Sbjct: 180 VQLKLPFIAYLNQTIKAIHYLDVMESMAKAFAFAIIISMVGCYRGMNSSSDAQGVGKAAT 239

Query: 348 TCVVQSISIVIIIDSLFAIFY 368
           + VV  I ++I+ D+L  I +
Sbjct: 240 SSVVSGIFLIIVADTLMTIIF 260


>gi|170691590|ref|ZP_02882755.1| protein of unknown function DUF140 [Burkholderia graminis C4D1M]
 gi|170143795|gb|EDT11958.1| protein of unknown function DUF140 [Burkholderia graminis C4D1M]
          Length = 389

 Score =  119 bits (299), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 77/215 (35%), Positives = 127/215 (59%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
            +Y  G   +P+  L++F+ G V++   A QL  FGA  + ++++ +  +RE+G +L+A+
Sbjct: 174 NIYNAGTKALPITALVAFLIGIVLSYLSAQQLRLFGANQYIVNILGLSVIRELGPVLSAI 233

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++AGRSGSAI A+IG M++ EE+DA+R MG+     LI PR+ AL +++PLL +  +  A
Sbjct: 234 LVAGRSGSAITAQIGVMRVTEELDAMRVMGIPHGLRLILPRVIALGVAMPLLVMWTDIIA 293

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           + G ++       I  + F         +AN++ GL K       I I     GF +  +
Sbjct: 294 LTGGAVAAKIVLGIDMSYFARALPGVVPVANLWIGLGKGVAFGMLIAIAGCHFGFRIKAN 353

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           S SLG+  TT VV SI+IVI+ D++FAI +  +G+
Sbjct: 354 SQSLGEGTTTSVVTSITIVILADAVFAILFQNVGL 388


>gi|189426230|ref|YP_001953407.1| hypothetical protein Glov_3181 [Geobacter lovleyi SZ]
 gi|189422489|gb|ACD96887.1| protein of unknown function DUF140 [Geobacter lovleyi SZ]
          Length = 261

 Score =  119 bits (299), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 130/230 (56%), Gaps = 4/230 (1%)

Query: 136 ISNTGEFCA----SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           + N G+F      S  +  G  + +++Q+ ++G   + V++L +  TG V+  QG + L+
Sbjct: 24  LGNCGQFLVYALYSILRRPGRPVHILKQVSFIGAKSLFVIVLTAAFTGMVLGLQGYYTLT 83

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           +FG+E      +++  +RE+G +L+A+M+ GR+GSAI AEIG M+I+E+IDA+ TM LD 
Sbjct: 84  KFGSEGMLGTAVALSLIRELGPVLSALMVTGRAGSAITAEIGIMRISEQIDALETMALDP 143

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
            + LISP+  A +IS+PLL  + +   I G  +V  K   +    +FS  + +    +++
Sbjct: 144 YKYLISPKFIAAMISMPLLCAIFDVVGIYGGWMVGVKLLGVNPGAYFSEMYKSVEWKDVY 203

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           +G +K+      I  +   +G+  G  +  + +  T  VV +  ++++ D
Sbjct: 204 SGFVKSYSFGIIIAWIGCYKGYYAGHGAEGVSRATTESVVLTSVLILVWD 253


>gi|281356267|ref|ZP_06242760.1| protein of unknown function DUF140 [Victivallis vadensis ATCC
           BAA-548]
 gi|281317636|gb|EFB01657.1| protein of unknown function DUF140 [Victivallis vadensis ATCC
           BAA-548]
          Length = 272

 Score =  119 bits (298), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 136/272 (50%), Gaps = 26/272 (9%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ----- 159
            S K L   +    +   +D C               FC  S +     L  IR      
Sbjct: 7   RSLKQLCIEVADSAIALRDDLCL--------------FCTFSRQLGKATLDAIRHPRKIR 52

Query: 160 ---MYY----VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
              +YY     G   +P++ L+ F+ G ++A Q   QL +FG E + ++L+  + + E+ 
Sbjct: 53  RYDVYYYMDNCGSDAMPIIALLGFLIGVILAFQAIVQLRRFGVESYVVNLVGTVIVTELA 112

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            L+TAV++AGR+GS+  AE+G+MK +EEIDA+ TMG D  R L+ P++ AL++ +P LTI
Sbjct: 113 PLVTAVVLAGRTGSSFAAELGTMKADEEIDAMVTMGFDPGRFLLFPKMLALLLIMPGLTI 172

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           +++   I G  +++     +    + ++        ++  GL+K+   A  +  +   +G
Sbjct: 173 ISDVCGIAGGMVIVCSMLQVSTGEYLTKTFEIIQPIDLAQGLVKSFVFAVIVAGIGCMKG 232

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
                ++  +G+  T+ VV SI ++++ D++ 
Sbjct: 233 LNAERNAQGVGRSATSAVVTSIFLIVVTDAIL 264


>gi|124516678|gb|EAY58186.1| putative integral membrane protein [Leptospirillum rubarum]
          Length = 255

 Score =  119 bits (298), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 139/256 (54%), Gaps = 7/256 (2%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           +G+K +     S S   ++  V + TG F   ++ +  FL+ L++    VG    PVV++
Sbjct: 7   VGRKCIGLF--SISGDLLITTVTALTGMF-RPAFLWWNFLVQLVK----VGADSTPVVLV 59

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
            +  TG V+A Q      +F AE     ++S+   RE+G ++T +M++GRSGS++ AE+G
Sbjct: 60  TALFTGMVLALQAWIGFQKFNAEGMVGAVVSLSLTRELGPVITGLMVSGRSGSSMAAELG 119

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           +M++ E+IDA+ ++ +  +  L++PR +A +I+LPLLT++A+F  I+G   V      +P
Sbjct: 120 TMRVTEQIDALESLAVSPLVYLVTPRFYAGLIALPLLTVMADFVGIVGGYFVAVNLLGLP 179

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
             V+         L + ++GL+KA      + I +   G+     +  +G+ VT  VV S
Sbjct: 180 SNVYVKGIARYVNLHDFYSGLVKACIFGAVLSIFSCYMGYHARGGAAGVGQSVTKAVVSS 239

Query: 354 ISIVIIIDSLFAIFYF 369
              ++++D     + F
Sbjct: 240 SMAILVLDYFLTAWLF 255


>gi|299136991|ref|ZP_07030174.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX8]
 gi|298601506|gb|EFI57661.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX8]
          Length = 259

 Score =  119 bits (298), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 119/215 (55%), Gaps = 2/215 (0%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           QM  +GV  +P+V+L  F TG V+A Q A  L +FGA   +  L+++  ++E+G +LT +
Sbjct: 44  QMDSIGVGSLPIVVLTGFFTGCVLALQAAVSLKEFGAINMTGKLVALSMVKELGPVLTGL 103

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           M++GR+ S + +E+GSMK+ E+IDA+R +G D +R L++PR+ A +  L  LTI+++   
Sbjct: 104 MVSGRNASGMASELGSMKVTEQIDAMRALGTDPIRKLVTPRLVATVFMLFFLTIISDACG 163

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
             G ++V      +    FF   + +    ++  GL+K  F    I  +    G      
Sbjct: 164 TGGGALVAVVLLRLNGPAFFHTAYMSLVGGDVVEGLVKPLFSGFIIATIGCYYGLRTTGG 223

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           +  +GK  T  VV S  ++I++D  F +    IGI
Sbjct: 224 TQGVGKATTQAVVASSVLIILVD--FLVTQLMIGI 256


>gi|322435258|ref|YP_004217470.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX9]
 gi|321162985|gb|ADW68690.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX9]
          Length = 259

 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 115/205 (56%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           QM  +GV  +P+V+L  F TG V+A Q A  L QFG+   +  L+++  ++E+G +LT +
Sbjct: 44  QMDSIGVGSLPIVVLTGFFTGCVLALQSATALKQFGSISLTGSLVALSMVKELGPVLTGL 103

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           M++GR+ S + +E+GSM + E+IDA+R +G D +R L++PRI A ++ L  LTIL++   
Sbjct: 104 MVSGRNASGMASELGSMMVTEQIDAMRALGTDPIRKLVTPRIIATVVMLFFLTILSDAVG 163

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           I G ++V      +  + +    + +    ++  GL K  F A  I  V    G      
Sbjct: 164 IAGGALVSVTILGLNLSSYLHTSYQSLLYGDVVQGLTKPLFSAFIIATVGCFFGLKTKGG 223

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSL 363
           +  +GK  T  VV S   +I++D L
Sbjct: 224 TQGVGKATTQAVVYSSVFIIVVDFL 248


>gi|120602860|ref|YP_967260.1| hypothetical protein Dvul_1816 [Desulfovibrio vulgaris DP4]
 gi|120563089|gb|ABM28833.1| protein of unknown function DUF140 [Desulfovibrio vulgaris DP4]
          Length = 267

 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 125/220 (56%), Gaps = 5/220 (2%)

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           L  ++ Q+Y +G   + V++LI   TG V+  QG + L +FG+E      +++  +RE+G
Sbjct: 46  LPKIVNQVYVIGYKSLFVILLIGIFTGMVLGLQGYYTLVKFGSEGLLGAAVALTLIRELG 105

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            +LTA+M+ GR+GS++ AEIG M+I ++IDA+  M ++ +  L+SPRI A +++ PLLT 
Sbjct: 106 PVLTAIMVTGRAGSSMAAEIGVMRITDQIDALDVMDINPMGYLVSPRIAASLVAFPLLTA 165

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           L +   IIG  +       I   V+F R  ++  LA++  G +K+   A  +  V+  +G
Sbjct: 166 LFDVIGIIGGYVTGVMLLGINEGVYFHRIATSVELADVTGGFMKSLLFALIVSTVSCYQG 225

Query: 333 FAVGVHSNSLGKK-----VTTCVVQSISIVIIIDSLFAIF 367
           +   +  + +G +      T+ VV S  +V++ D +   F
Sbjct: 226 YFTHMRRDGMGPEGVSNSTTSAVVMSCVLVLVADYVLTSF 265


>gi|196231158|ref|ZP_03130018.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428]
 gi|196224988|gb|EDY19498.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428]
          Length = 264

 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 119/214 (55%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
            Q    GV  VP+V L+SF  G  +A      L+ +G E      ++I   RE+G L+T 
Sbjct: 48  EQADRTGVGSVPLVALVSFFLGLTMALLTGHVLAPYGQETLVPAAVAIGFTRELGPLITG 107

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +M+A R G+A  AE+G+M + EE++AI  MGL  +R+L+SPR+ A  + +P L++++N  
Sbjct: 108 IMVAARVGAAFTAELGTMVVAEEVEAIEAMGLGPLRLLVSPRVLAAFLLMPCLSVVSNMM 167

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           A+ G +++    +DIP   F+        + +I  G++K+      IG++A  +G  V  
Sbjct: 168 ALSGGALISRWAFDIPMQGFWQSSLENLFIRDIVAGVLKSFLFGLLIGLIACYKGLTVRG 227

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
            +  +G   T+ VV +I+ VI  D++F I   A+
Sbjct: 228 GAAGVGTATTSSVVTAITTVIGFDTVFNIVLVAL 261


>gi|148263112|ref|YP_001229818.1| hypothetical protein Gura_1039 [Geobacter uraniireducens Rf4]
 gi|146396612|gb|ABQ25245.1| protein of unknown function DUF140 [Geobacter uraniireducens Rf4]
          Length = 256

 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 118/206 (57%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +++Q+ ++G     V+ L +  TG V+  QG + L++FG+E      +++  +RE+G +L
Sbjct: 43  ILKQIRFIGAKSFFVIFLTASFTGMVLGLQGYYTLAKFGSEGMLGSAVALSLIRELGPVL 102

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA+M+ GR+GSAI AEIG M+I E+IDA+ TM L+  + L+SP++ A IISLPLL  + +
Sbjct: 103 TALMVTGRAGSAISAEIGIMRITEQIDALETMALEPCKYLVSPKLLAAIISLPLLCAIFD 162

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              I G  +V  K   +    +F     +    ++++G+IK+      I  +   +G+  
Sbjct: 163 VVGIYGGYLVGVKLLGVNPGAYFHEMEKSVEWKDVYSGIIKSVSFGVIIAWICCYKGYFA 222

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361
           G  +  + +  T  VV S  +V+I D
Sbjct: 223 GHGAEGVSRATTAAVVMSSVMVLIWD 248


>gi|46579657|ref|YP_010465.1| hypothetical protein DVU1246 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46449072|gb|AAS95724.1| membrane protein, putative [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311233455|gb|ADP86309.1| protein of unknown function DUF140 [Desulfovibrio vulgaris RCH1]
          Length = 267

 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 125/220 (56%), Gaps = 5/220 (2%)

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           L  ++ Q+Y +G   + V++LI   TG V+  QG + L +FG+E      +++  +RE+G
Sbjct: 46  LPKIVNQVYVIGYKSLFVILLIGIFTGMVLGLQGYYTLVKFGSEGLLGAAVALTLIRELG 105

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            +LTA+M+ GR+GS++ AEIG M+I ++IDA+  M ++ +  L+SPRI A +++ PLLT 
Sbjct: 106 PVLTAIMVTGRAGSSMAAEIGVMRITDQIDALDVMDINPMGYLVSPRIAASLVAFPLLTA 165

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           L +   IIG  +       I   V+F R  ++  LA++  G +K+   A  +  V+  +G
Sbjct: 166 LFDVIGIIGGYVTGVMLLGINEGVYFHRIATSVELADVTGGFMKSLLFALIVSTVSCYQG 225

Query: 333 FAVGVHSNSLGKK-----VTTCVVQSISIVIIIDSLFAIF 367
           +   +  + +G +      T+ VV S  +V++ D +   F
Sbjct: 226 YFTHMRRDGMGPEGVSNSTTSAVVMSCVLVLVADYVLTSF 265


>gi|303246386|ref|ZP_07332665.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans
           JJ]
 gi|302492096|gb|EFL51971.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans
           JJ]
          Length = 268

 Score =  118 bits (295), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/190 (35%), Positives = 111/190 (58%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +++Q+Y++GV  + V++LI   TG V+  QG + L +FG+E      +++  +RE+G +L
Sbjct: 50  IVQQVYFIGVKSIFVIVLIGLFTGMVLGLQGYYTLVKFGSEGLLGAAVALSIIRELGPVL 109

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA+M+ GR+GS+I AEIG M+I+E+IDA+ TMG++ +R LI+PR+ A +I  PLLT + +
Sbjct: 110 TAIMLTGRAGSSIAAEIGIMRISEQIDALTTMGINPMRFLIAPRLAASLICFPLLTAIFD 169

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              I G  +       I   V+F R  +   LA++  G  K+   A  +  +   EG+  
Sbjct: 170 VVGIGGGYLTGVVLLGINPGVYFDRIDAAVELADVTGGFEKSIVFALLVAAICCYEGYFT 229

Query: 336 GVHSNSLGKK 345
                  G K
Sbjct: 230 HTRREGFGAK 239


>gi|15605864|ref|NP_213241.1| hypothetical protein aq_355 [Aquifex aeolicus VF5]
 gi|2983037|gb|AAC06647.1| hypothetical protein aq_355 [Aquifex aeolicus VF5]
          Length = 245

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 112/205 (54%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I Q+ YV     PVV++ S  TG VIA Q      +F AE     +++I   RE+G +LT
Sbjct: 33  ISQLTYVAAETTPVVLVTSLFTGGVIALQTYSTFHRFNAEYLIGAVVAISMGRELGPVLT 92

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           ++M+  R GSA+ A IG+M+I ++IDA+  M ++ +  L++PRI+A    +PLLT+L++ 
Sbjct: 93  SLMVVARVGSAMTASIGTMRITQQIDALEVMAINPISFLVTPRIFATTFGVPLLTVLSDV 152

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           + I G   V  K + +   +++ +        +I  GL KA F    IG V+   GF   
Sbjct: 153 AGIFGGWFVATKLFGVNEYLYWQKMVDLTEFHDIVGGLYKATFFGFIIGAVSCYYGFYTK 212

Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361
             +  +GK  T  VV S  +++I D
Sbjct: 213 GGTAGVGKATTNSVVTSSMLILISD 237


>gi|206603562|gb|EDZ40042.1| Putative integral membrane protein [Leptospirillum sp. Group II
           '5-way CG']
          Length = 255

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 118/211 (55%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           Q+  VG    PVV++ +  TG V+A Q      +F AE     ++S+   RE+G ++T +
Sbjct: 45  QLVKVGADSTPVVLVTALFTGMVLALQAWIGFQKFNAEGMVGAVVSLSLTRELGPVITGL 104

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           M++GRSGS++ AE+G+M++ E+IDA+ ++ +  +  L++PR +A +I+LPLLT++A+F  
Sbjct: 105 MVSGRSGSSMAAELGTMRVTEQIDALESLAVSPLVYLVTPRFYAGLIALPLLTVMADFVG 164

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           I+G   V      +P  V+         L + ++GL+KA      + I +   G+     
Sbjct: 165 IVGGYFVAVNLLGLPSNVYVKGIARYVNLHDFYSGLVKACIFGAVLSIFSCYMGYHARGG 224

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           +  +G+ VT  VV S   ++++D     + F
Sbjct: 225 AAGVGQSVTKAVVSSSMAILVLDYFLTAWLF 255


>gi|116749878|ref|YP_846565.1| hypothetical protein Sfum_2450 [Syntrophobacter fumaroxidans MPOB]
 gi|116698942|gb|ABK18130.1| protein of unknown function DUF140 [Syntrophobacter fumaroxidans
           MPOB]
          Length = 266

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 115/212 (54%), Gaps = 1/212 (0%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           QM  VGV  +P+V L+SFV G ++  Q A+QL +FGA  ++  L  +   RE+  LLTA+
Sbjct: 53  QMDEVGVKSIPIVALVSFVIGIILVLQTAYQLEKFGAINYAASLAGVALTREMAPLLTAI 112

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++AGR  +A  AE+G+M + EEI A+  M ++ V  L+ PR  A+++ LP LT+LA+   
Sbjct: 113 VVAGRVSAAFTAELGTMLVTEEILALEVMAINPVAYLVVPRFIAMLVMLPCLTVLADLIG 172

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           +IG   V      I  +++         L +I TGL K+   A  I +V     F V   
Sbjct: 173 MIGGYAVGTTAVGIRSSLYIQNTIDALLLKDILTGLTKSVVFAGIIAMVGCYMAFVVRGG 232

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLF-AIFYF 369
           +  +GK     VV S+  +I+ D  F  +FY 
Sbjct: 233 AEGVGKATMISVVTSLISIILADCFFTTVFYL 264


>gi|87311113|ref|ZP_01093237.1| probable permease of ABC transporter [Blastopirellula marina DSM
           3645]
 gi|87286204|gb|EAQ78114.1| probable permease of ABC transporter [Blastopirellula marina DSM
           3645]
          Length = 280

 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 108/207 (52%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           +L+   Y VGV  +PVV L     G V+A Q  FQ  Q G E     ++++  +RE+G +
Sbjct: 49  TLVPNFYQVGVMSLPVVALTGTFIGMVLAVQSYFQFRQLGLETRLGAVINMTLVRELGPV 108

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           L A M+AGR GSA+ AE+G+M++ E+IDA+ +MG + +  L+ PR  A +I +P LT++A
Sbjct: 109 LAATMLAGRVGSAMAAELGTMRVTEQIDALDSMGTNPIHYLVVPRFLACVILIPALTVMA 168

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
           +F   +G          I    +           +IF GLIK+ F    I IV+   GF 
Sbjct: 169 DFMGFVGGYFYSVNILGIDQHYYMYNSEQFVQSWDIFYGLIKSVFFGGTIAIVSCHRGFH 228

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIID 361
               +  +G+  T   V S   ++ ID
Sbjct: 229 CEAGAEGVGRAATAAFVYSFVFILAID 255


>gi|78355070|ref|YP_386519.1| transporter [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
 gi|78217475|gb|ABB36824.1| transporter, putative [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 250

 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 126/214 (58%), Gaps = 1/214 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
            Q+   G   + +V +I+  TG ++A Q A QL + GA  +  +++S+  ++E+G LLTA
Sbjct: 36  HQLAETGTRSLGIVSVIAACTGMILALQAAQQLEKVGALSYVANMVSVTIVKELGPLLTA 95

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +++AGRSG+A  AEI +M+I EEIDA+  +G+  VR L+ P++ A++I LP+LT+ A+  
Sbjct: 96  IILAGRSGAAFCAEISTMQIYEEIDALEVIGISPVRYLVVPKLCAMLIMLPVLTLWADLV 155

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            II   +       + F+ + ++        ++ + ++KA     AI ++   +GF    
Sbjct: 156 GIISGGLFAALGLGLSFSGYLNQAVYFLGTGDVVSSVVKAAGFGTAITLICCWQGFMAQG 215

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLF-AIFYFA 370
            +  +G++ T  VVQSI +VI++D  F AI Y A
Sbjct: 216 GAADVGRRTTKAVVQSIFMVILLDLFFTAINYLA 249


>gi|303246825|ref|ZP_07333102.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans
           JJ]
 gi|302491842|gb|EFL51722.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans
           JJ]
          Length = 254

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 117/206 (56%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
            M ++G   +P++ +IS   G ++A Q A QL + GA  +  +L+    + E+G LLT +
Sbjct: 41  HMAWIGADSLPIISIISACVGIILALQSATQLEKVGAMSYVANLVGYSIITELGPLLTCL 100

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++AGR+G+A  AEI +M+I+EEIDA+  MG+D VR L+ P+  A+ +  PLLT+  +   
Sbjct: 101 ILAGRAGAAFTAEIATMRISEEIDALEVMGVDPVRFLVWPKFAAMCVMAPLLTLWGDCIG 160

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           I    I       +    +F +     T+ ++ +GL+K+      I I++  +GF     
Sbjct: 161 ISAGGIFSALALGLSGKAYFLQTAGFLTMRDLLSGLVKSAGFGVTITIISCWQGFLAREG 220

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLF 364
           +  +G++ T  VVQSI ++I++D  F
Sbjct: 221 AADVGRRTTRAVVQSIFLMILLDLFF 246


>gi|53802513|ref|YP_112711.1| ABC transporter permease [Methylococcus capsulatus str. Bath]
 gi|53756274|gb|AAU90565.1| putative ABC transporter, permease protein [Methylococcus
           capsulatus str. Bath]
          Length = 406

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 130/214 (60%)

Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219
           ++  G   + +  L+ F+ G V++   + QL  FGA+++ ++++ +  +RE+G LL A++
Sbjct: 192 IHETGGRALGITALVGFLIGVVVSYLSSLQLKTFGAQVYIVNILGMSIIRELGPLLAAIL 251

Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279
           +AGRSGS++ A IG M++ +E+DA+  MG+     LI P++ AL+++LPLL +  +  A+
Sbjct: 252 VAGRSGSSMTARIGVMRVTQELDALAAMGISQSLRLILPKVVALVVALPLLVVWTDVVAL 311

Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339
            G ++      +I +  FF +  S   +AN   GL KA      + ++A   G  +  ++
Sbjct: 312 AGGAVSAHLELEIGYHQFFQKLPSAVPVANFAIGLGKAAVFGLFVALIACHYGLRIAPNT 371

Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
            SLG + T  VV SI++VI++D++FAI + ++GI
Sbjct: 372 ESLGNETTNSVVVSITLVILVDAVFAILFRSVGI 405


>gi|207727753|ref|YP_002256147.1| abc-type transport system involved in resistance to organic
           solvents, permease component protein [Ralstonia
           solanacearum MolK2]
 gi|206590994|emb|CAQ56606.1| abc-type transport system involved in resistance to organic
           solvents, permease component protein [Ralstonia
           solanacearum MolK2]
          Length = 374

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 104/373 (27%), Positives = 185/373 (49%), Gaps = 16/373 (4%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITE---IDTIGAELIMY 60
           +G +V   +G+W +  ++E A   V +  + I++     +   +TE   ID  GA+L+  
Sbjct: 15  DGRSVAYLSGDWTTLALAERAG--VRSARRQIRAGLDNANAWCLTEVGRIDHFGAQLLW- 71

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
              +  G    + +    +Q   +I    R      K + +   N    L    G  ++ 
Sbjct: 72  ---RAWGNRWPEHLDARADQR-RMIDRVARLDPGGWKKRIAPRINPVTVL----GGAMLD 123

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           F         ++G ++ +   F  + ++  G    +   +Y  G   + +  L+ F+ G 
Sbjct: 124 FAGHLRIGVAMVGQLMFDLLRFARAPHR--GPWREISANIYSTGYKALGITALVGFLIGI 181

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V++   A QL  FGA IF ++++ +  +RE+G +L A+++AGRSGSAI A+IG M++ EE
Sbjct: 182 VLSYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEE 241

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +DA+R MG+     LI P++ AL I++PLL    +  A+ G  +      DI    F + 
Sbjct: 242 LDAMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITS 301

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                 +AN++ G+ K       I +VA   G  +  ++ SLG+  TT VV SI++VI+ 
Sbjct: 302 LPDAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITVVILA 361

Query: 361 DSLFAIFYFAIGI 373
           D++FAI +  +GI
Sbjct: 362 DAVFAILFKDVGI 374


>gi|223940418|ref|ZP_03632271.1| protein of unknown function DUF140 [bacterium Ellin514]
 gi|223890913|gb|EEF57421.1| protein of unknown function DUF140 [bacterium Ellin514]
          Length = 259

 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 125/233 (53%), Gaps = 1/233 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG +   T E  +S +  KG   + I Q+Y++GV    VV++    TG V+  Q  +Q  
Sbjct: 16  LGRISLLTKEALSSLFSLKGSWGNFIYQLYFIGVKSQSVVLITGAFTGMVLCAQTYYQFH 75

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           Q   +  ++ ++S+    E+G +LTA+M+AGR G+A+ AEIG+MK+ E++DA+RT+    
Sbjct: 76  QVKLDTATLAVVSVSMCSELGPVLTALMVAGRVGAAMAAEIGTMKVTEQVDALRTLATHP 135

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A ++SLPLLT  A    II   +V      I     ++        +++ 
Sbjct: 136 VDYLVVPRLTASVVSLPLLTAEAIAVGIISGYMVGVYLLGIDPVYSYTNMLKYTNSSDVM 195

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           TG+IK+      I I+   +G   G  +  +G+  T  VV + SI I+I + F
Sbjct: 196 TGIIKSVIFGVIIAIIGCYKGMTCGEGAEGVGRATTEAVVYA-SITILISNFF 247


>gi|222109464|ref|YP_002551728.1| hypothetical protein Dtpsy_0244 [Acidovorax ebreus TPSY]
 gi|221728908|gb|ACM31728.1| protein of unknown function DUF140 [Acidovorax ebreus TPSY]
          Length = 372

 Score =  116 bits (291), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 127/214 (59%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
            +Y +G + +P+  L+ F+ G V+A   + QL QFGAE F ++++ I  +RE+G +L A+
Sbjct: 158 HLYRMGATALPITALVGFLIGVVLAYLMSLQLRQFGAEAFIVNILGISLIRELGPMLGAI 217

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++AGRSGSAI A+IG M++ EE+DA+R MG+     L+ PR  AL +++PL+ +    +A
Sbjct: 218 LVAGRSGSAITAQIGVMRVTEELDAMRVMGIPHGFRLVMPRALALALAMPLVALWTTLAA 277

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           + G  +       I  A F     +   ++N++  + K+      I ++    G  V  +
Sbjct: 278 LAGGMLAADLTMGISSAYFAQALPAAVNVSNLWLAMSKSVVFGVFIALIGCHWGLRVKPN 337

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           + SLG+  T  VV +I++VII+D+LFA+ +  +G
Sbjct: 338 TQSLGEGTTASVVSAITMVIIVDALFAVAFKNVG 371


>gi|67458472|ref|YP_246096.1| ABC transporter permease protein [Rickettsia felis URRWXCal2]
 gi|75537058|sp|Q4UNC7|Y080_RICFE RecName: Full=Probable ABC transporter permease protein RF_0080
 gi|67004005|gb|AAY60931.1| ABC transporter permease protein [Rickettsia felis URRWXCal2]
          Length = 259

 Score =  116 bits (291), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 145/267 (54%), Gaps = 15/267 (5%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKG--FLLSLIRQMYYVGVS 166
           N+   +GK+ +KF     S +            F A S   +   +L  +IRQ+ ++G  
Sbjct: 4   NIANSVGKRTIKFAQSVGSFSLF---------SFAAVSSIIRPPLYLSLIIRQLLFIGFH 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTAVMIAGRSG 225
            +PVV + +F +GAV+A Q     S+F AE  SI  + +L L RE+G +L  +M+AGR G
Sbjct: 55  SLPVVAMTTFFSGAVLALQSYTGFSRFSAE-SSIATVVVLSLTRELGPVLAGLMVAGRVG 113

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           ++I AEI +M++ E++DA+ T+  D ++ L+ PR+ A II++P L ++ +   ++G  +V
Sbjct: 114 ASIAAEIATMRVTEQVDALYTLSTDPIKYLVFPRVIAAIITMPCLVLIGDIIGVMGGYLV 173

Query: 286 -IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
            ++K      A   S FH    + ++ +GL+KA      I I++   G+  G  +  +G+
Sbjct: 174 GVYKLDFNSTAYLTSTFHYLEPI-DVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGR 232

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFAI 371
             T+ VV S  +++I + L    +F +
Sbjct: 233 ATTSAVVNSSILILISNYLITELFFKV 259


>gi|315125511|ref|YP_004067514.1| ABC transporter membrane protein [Pseudoalteromonas sp. SM9913]
 gi|315014024|gb|ADT67362.1| ABC transporter membrane protein [Pseudoalteromonas sp. SM9913]
          Length = 259

 Score =  116 bits (291), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 116/199 (58%), Gaps = 1/199 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y VG   + ++++     G V+A QG   L  +GAE     L+++  LRE+G ++
Sbjct: 43  LVRQLYMVGSQSLLIIVVSGLFIGMVLALQGYTVLVDYGAEDSLGPLVALSLLRELGPVV 102

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+P+L ++ +
Sbjct: 103 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAIDPLRRIIAPRFWAGLISMPMLALIFS 162

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
             AIIGA +V   +  +    F+S   S  +   +I  GLIK+   A  +  +A+ +G+ 
Sbjct: 163 AVAIIGAHLVGVDWLGVDTGSFWSIMQSQVSFEKDILNGLIKSIVFAIVVTWIALYKGYD 222

Query: 335 VGVHSNSLGKKVTTCVVQS 353
               S  + K  T  VV S
Sbjct: 223 CVPTSEGISKATTETVVHS 241


>gi|121592684|ref|YP_984580.1| hypothetical protein Ajs_0250 [Acidovorax sp. JS42]
 gi|120604764|gb|ABM40504.1| protein of unknown function DUF140 [Acidovorax sp. JS42]
          Length = 372

 Score =  116 bits (291), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 130/223 (58%)

Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209
           +G    +   +Y +G + +P+  L+ F+ G V+A   + QL QFGAE F ++++ I  +R
Sbjct: 149 RGPWRDISGHLYRMGATALPITALVGFLIGVVLAYLMSLQLRQFGAEAFIVNILGISLIR 208

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
           E+G +L A+++AGRSGSAI A+IG M++ EE+DA+R MG+     L+ PR  AL +++PL
Sbjct: 209 ELGPMLGAILVAGRSGSAITAQIGVMRVTEELDAMRVMGIPHGFRLVMPRALALALAMPL 268

Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329
           + +    +A+ G  +       I  A F     +   ++N++  + K+      I ++  
Sbjct: 269 VALWTTLAALAGGMLAADLTMGISSAYFAQALPAAVNVSNLWLAMSKSVVFGVFIALIGC 328

Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
             G  V  ++ SLG+  T  VV +I++VII+D+LFA+ +  +G
Sbjct: 329 HWGLRVKPNTQSLGEGTTASVVSAITMVIIVDALFAVAFKNVG 371


>gi|302341646|ref|YP_003806175.1| hypothetical protein Deba_0204 [Desulfarculus baarsii DSM 2075]
 gi|301638259|gb|ADK83581.1| protein of unknown function DUF140 [Desulfarculus baarsii DSM 2075]
          Length = 244

 Score =  116 bits (291), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 120/214 (56%), Gaps = 1/214 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +++QM +VG   + VV+L    TG V A Q  +  S FGAE      +++   RE+G +L
Sbjct: 31  VLKQMEFVGNKSINVVMLTGAFTGGVFALQSYYGFSLFGAESLVGSTVALALTRELGPVL 90

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           T++M+ GR+GSA+ AEIG+M++ E+IDA+  M ++ V+ L+ PR+ A +I LP LTI+AN
Sbjct: 91  TSLMVTGRAGSAMAAEIGTMRVTEQIDALYVMAVNPVQYLVLPRVLAAVIMLPALTIVAN 150

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
           F  I+G   V      I   VF ++        +I  GL+K+      + ++   +GF  
Sbjct: 151 FIGILGGYAVGVGMLGINEGVFVAKIIEYVEFDDIGMGLVKSAIFGLILSLIGCYKGFYT 210

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID-SLFAIFY 368
              +  +G+  T  VV +  +++  D +L AI +
Sbjct: 211 SGGAEGVGRATTEAVVLASVLILAADYALTAIMF 244


>gi|328954039|ref|YP_004371373.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM
           11109]
 gi|328454363|gb|AEB10192.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM
           11109]
          Length = 377

 Score =  116 bits (290), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 178/369 (48%), Gaps = 20/369 (5%)

Query: 12  AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFMEKYHGK 68
           +G+W        AD V   +  S+   + + D   +   DT     +M    F  + +  
Sbjct: 22  SGDWLLGGELPAADRVQQRLEGSLGVRNLVFDTRELAHWDTGLLTFLMSLATFCSQQNIY 81

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR----SFFYNSFKNLHYHIGKKIVKFIND 124
           +   G+    ++L  L S    KK  ++  +R    +F  N   N     G+ +++FI D
Sbjct: 82  LDRDGLPPGAKRLLELASAVPEKKDAHKVEERLSFLAFLGNETVNFFQSAGE-LLEFIGD 140

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           +     +L L+            +++   L LI  M  VGV  +P+V LI F+ G ++A 
Sbjct: 141 AV--IAVLRLIRGQA--------QYRRADLGLI--MQAVGVQALPIVSLICFLVGLILAF 188

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            GA QL  FGA+I+  DL+ I  +R +  ++T +++AGR+G A  A++G+M++N+EIDA+
Sbjct: 189 IGAIQLKLFGAQIYVADLVGIAMVRLMAAIMTGIVMAGRTGGAFAAQLGTMQVNQEIDAL 248

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           +T+G+  +  L+ PR+ AL + +PLL + AN   I+G   V      I F  ++++  + 
Sbjct: 249 KTLGISPMEFLVLPRMLALALMMPLLCLYANVMGILGGMAVGVGMLGIGFIQYYNQTAAA 308

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L N+  GL         + +     G   G  ++++G   T+ VV +I  +I+  +  
Sbjct: 309 VGLWNLGIGLFSGTVFGVIVALAGCMRGMQCGRSASAVGDAATSAVVTAIVGIIVSTAAI 368

Query: 365 AIFYFAIGI 373
            I    +GI
Sbjct: 369 TILCNFLGI 377


>gi|187734672|ref|YP_001876784.1| protein of unknown function DUF140 [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187424724|gb|ACD04003.1| protein of unknown function DUF140 [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 266

 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 144/272 (52%), Gaps = 19/272 (6%)

Query: 110 LHYH----IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
           + +H    IG+  ++ ++   S    +GL++      C  S +F+  +  L+ Q+  +GV
Sbjct: 1   MQFHVATMIGRAALRLVDRLGS----IGLLLYQVAS-CMWSGQFR--MRVLVEQIAKIGV 53

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
              PVVI+    TGAV+  Q  FQL     E     ++++   RE+G ++T +M+AGR G
Sbjct: 54  QSQPVVIITGAFTGAVLEAQTLFQLQTVRMETMGGAVVAVGMFRELGPVITGLMLAGRVG 113

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           SA+ AEIG+MK+ E++DA+++M +D V  L+ PRI A++IS+P+L + A    I  A IV
Sbjct: 114 SAMAAEIGTMKVTEQVDALKSMNVDPVDYLVKPRIQAMLISMPILMMEAVLVGIASAYIV 173

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF-----AVGVHSN 340
               +++  A +        T+ +I   L+KA      I  ++ +EG      AVGV  +
Sbjct: 174 SVTAFNVDQAYWMHFMSKFVTMGDIIVALVKALAFGLIISTISCREGLNTTNGAVGVGKS 233

Query: 341 SLGKKVTTCVVQSIS---IVIIIDSLFAIFYF 369
           ++   V   V   I+   + +I++S F + + 
Sbjct: 234 TMQAMVYASVALLIANFILTMILNSFFPMGFM 265


>gi|323699476|ref|ZP_08111388.1| protein of unknown function DUF140 [Desulfovibrio sp. ND132]
 gi|323459408|gb|EGB15273.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans
           ND132]
          Length = 267

 Score =  115 bits (289), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 119/211 (56%), Gaps = 5/211 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           ++RQ+Y++GV  V V+ LI   TG V+  Q  + LS FGA+ F    +++  +RE+  +L
Sbjct: 49  IVRQIYFIGVQSVSVIALIGLFTGMVMGMQLYYALSVFGADGFLGTGVALSMVRELAPVL 108

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA+M+ GR+GSA+ AEIG M+I+E+IDA+  M ++ +R L++P++ A +IS P+LT   N
Sbjct: 109 TAIMLTGRAGSAMTAEIGVMRISEQIDALTIMDINPMRYLVAPKMAACLISFPILTAFFN 168

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             A+ G  +   K       V++SR   +    +I  G IK+      +  +   EG+  
Sbjct: 169 LIALWGGWLTGVKLLGANAGVYWSRVSGSLDWDDIEGGFIKSIVFGLLVCTICCFEGYNT 228

Query: 336 GVHSNSLG-----KKVTTCVVQSISIVIIID 361
            + S   G     +  T+ VV+S  I++  D
Sbjct: 229 HLRSGHAGPEGVSQSTTSAVVKSCVIILAAD 259


>gi|119776212|ref|YP_928952.1| hypothetical protein Sama_3080 [Shewanella amazonensis SB2B]
 gi|119768712|gb|ABM01283.1| putative membrane protein [Shewanella amazonensis SB2B]
          Length = 260

 Score =  115 bits (289), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 76/222 (34%), Positives = 124/222 (55%), Gaps = 2/222 (0%)

Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209
           KGF L L++Q+Y VGV  + ++++     G V+A QG   L  FG E     ++++  LR
Sbjct: 40  KGFPL-LVKQLYVVGVQSLIIILVSGLFIGMVLALQGYTILVDFGTEESLGPMVALSLLR 98

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
           E+G ++TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+PL
Sbjct: 99  ELGPVVTALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAVDPLRQIIAPRFWAGVISMPL 158

Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVA 328
           L ++     I G  IV  ++  I    F+S   ++     +I   LIK+   A  +  +A
Sbjct: 159 LALMFTAVGIWGGHIVGVEWKGIDNGAFWSILQASVEWRQDIVNCLIKSLVFAVVVTWIA 218

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  G+ V  +   + K  T+ VVQS   V+ +D L     F 
Sbjct: 219 LYRGYEVVPNPEGISKATTSTVVQSSLAVLALDFLLTALMFG 260


>gi|163788065|ref|ZP_02182511.1| ABC transporter, permease [Flavobacteriales bacterium ALC-1]
 gi|159876385|gb|EDP70443.1| ABC transporter, permease [Flavobacteriales bacterium ALC-1]
          Length = 260

 Score =  115 bits (289), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 121/223 (54%)

Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198
           TG F    +K       L+ Q Y +G   + +V +  F+ G V+  Q    L +FGA  +
Sbjct: 25  TGRFFKELFKRPFEFKELLNQCYSMGNKSLLLVGITGFIIGLVLTLQTRPTLMEFGAVSW 84

Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258
              ++SI  +REIG +LTA++ AGR GS I AEIGSMK+ E+IDA+   G +  + L+  
Sbjct: 85  MPSMVSISIVREIGPILTALVCAGRIGSGIGAEIGSMKVTEQIDAMEVSGTNPFKYLVVT 144

Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318
           R+ A+ + LPLL I+ +  A++G+ +V     D+ F ++F++        +I    IK+ 
Sbjct: 145 RVLAVTLMLPLLVIIGDAVALLGSYLVESVKGDVSFVLYFNQVFDALKFGDIMPATIKSF 204

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           F   AIGIV   +G+     +  +GK   T VV +  ++ IID
Sbjct: 205 FFGLAIGIVGCYKGYYCKKGTAGVGKAANTAVVFTSLLLFIID 247


>gi|320354123|ref|YP_004195462.1| hypothetical protein Despr_2023 [Desulfobulbus propionicus DSM
           2032]
 gi|320122625|gb|ADW18171.1| protein of unknown function DUF140 [Desulfobulbus propionicus DSM
           2032]
          Length = 272

 Score =  115 bits (289), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 76/224 (33%), Positives = 121/224 (54%), Gaps = 10/224 (4%)

Query: 147 YKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206
           ++F+     LI+Q+ ++G   + V+   +  TG V+  QG + L +FGAE      +S+ 
Sbjct: 48  FRFR----ELIKQVGFIGAGSLTVIFFTALSTGMVLGLQGYYSLHKFGAEGMLGSAVSLS 103

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            + E+G +LTA+M+AGR+GSA+ AEIG M+I+E+IDA+  M +D  R  ISP++ A +IS
Sbjct: 104 LIMELGPVLTALMVAGRAGSAMCAEIGIMRISEQIDALECMAIDPFRYFISPKLLATLIS 163

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326
           +PLLT   +   I G  +   K   +    FFS    + T  ++  G+IK+   A  +  
Sbjct: 164 VPLLTAFFDVIGITGGYLAGVKLMGVNSGAFFSGMEQSVTNHDVRLGVIKSFVFALLVAW 223

Query: 327 VAMKEGFAV------GVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           +    G+ V      G  + S+ K  T  VV S   V+I D L 
Sbjct: 224 ICTGRGYFVQTIRGAGFGAESVSKVTTQAVVMSSISVLIFDYLL 267


>gi|120600243|ref|YP_964817.1| hypothetical protein Sputw3181_3451 [Shewanella sp. W3-18-1]
 gi|146291827|ref|YP_001182251.1| hypothetical protein Sputcn32_0722 [Shewanella putrefaciens CN-32]
 gi|120560336|gb|ABM26263.1| protein of unknown function DUF140 [Shewanella sp. W3-18-1]
 gi|145563517|gb|ABP74452.1| protein of unknown function DUF140 [Shewanella putrefaciens CN-32]
 gi|319425062|gb|ADV53136.1| ABC phospholipid transporter, inner membrane subunit, MlaE
           [Shewanella putrefaciens 200]
          Length = 261

 Score =  115 bits (289), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 124/222 (55%), Gaps = 2/222 (0%)

Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209
           KGF L L+RQ+Y VGV  + ++++     G V+A QG   L  FG E     ++++  LR
Sbjct: 40  KGFPL-LVRQIYVVGVQSMVIIVVSGLFIGMVLALQGYNILVGFGTEESLGPMVALSLLR 98

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
           E+G ++TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+PL
Sbjct: 99  ELGPVVTALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVISMPL 158

Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVA 328
           L ++     I G  +V  ++  I    F+S   ++     +I   LIK+   A  +  +A
Sbjct: 159 LALMFTAVGIYGGHLVGVEWKGIDSGAFWSILQASVEWQKDILNCLIKSGVFAVVVTWIA 218

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  G+ V  +   + +  T+ VVQS   V+ +D L     F 
Sbjct: 219 LYRGYQVIPNPEGISRATTSTVVQSSLAVLALDFLLTALMFG 260


>gi|317152440|ref|YP_004120488.1| hypothetical protein Daes_0725 [Desulfovibrio aespoeensis Aspo-2]
 gi|316942691|gb|ADU61742.1| protein of unknown function DUF140 [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 268

 Score =  115 bits (289), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 117/210 (55%), Gaps = 5/210 (2%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +RQ+Y++GV  V V+ LI   TG V+  Q  + LS FGA+ F    +++  +RE+  +L 
Sbjct: 51  VRQIYFIGVQSVTVIALIGLFTGMVMGMQLYYALSVFGADGFLGTGVALSMVRELAPVLA 110

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A+M+ GR+GSA+ AEIG M+I+E+IDA+  MG++ +R L++P++ A +IS P+L    N 
Sbjct: 111 AIMLTGRAGSAMTAEIGVMRISEQIDALTIMGINPMRYLVAPKMAACLISFPILNAFFNL 170

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            A+ G  +   K       V+++R   +   ++I  G IK+   A  +  +   EG+   
Sbjct: 171 IALWGGWLTGVKLLGANEGVYWARVQGSLDWSDIQGGFIKSMVFAVLVCTICCFEGYYTH 230

Query: 337 VHSNSLG-----KKVTTCVVQSISIVIIID 361
             S   G     +  T  VV+S  I++  D
Sbjct: 231 TRSGHAGPEGVSQSTTNAVVKSCVIILAAD 260


>gi|320353203|ref|YP_004194542.1| hypothetical protein Despr_1079 [Desulfobulbus propionicus DSM
           2032]
 gi|320121705|gb|ADW17251.1| protein of unknown function DUF140 [Desulfobulbus propionicus DSM
           2032]
          Length = 371

 Score =  115 bits (289), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 177/363 (48%), Gaps = 21/363 (5%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFMEKYHGKIKL 71
           G W          ++V A++ SI++ + +  DL+   E DT     ++ F++      + 
Sbjct: 23  GAWTLRTDPPPPTELVGALDSSIRTLAFLSTDLA---EWDT----RLLVFLKATTAAARN 75

Query: 72  QGVSTHIEQLFSLISFTHRKKIKNQKPQR-SFFYNSFKNLHYHIGKKIVKFINDSCSQAH 130
            G++  +E L           +    P++ ++  N  + L   IG+  +     +   A 
Sbjct: 76  GGIAVDLEGLPP--GVRRLLALSEAVPEKVTYGKNVRELLVTRIGRLTLALSGQAREAAA 133

Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYY----VGVSGVPVVILISFVTGAVIAQQG 186
             G +I       A    FK       R  +Y     GV  +P+V LI+ + G +++  G
Sbjct: 134 FTGEIILACMALAAGKKPFK------WRDFFYFIQSCGVESLPIVSLIAVLVGVILSFVG 187

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A QL  FGA+I+  +L+ +  + E+G L++ V+IAGR G+A  A++G+M++NEEIDA+RT
Sbjct: 188 AVQLQMFGAQIYVANLVGLGMVLEMGALMSGVIIAGRIGAAYAAQLGTMQVNEEIDALRT 247

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG+  V  L+ PR+ AL++ LPLL + A+   I+G S++     D+    +  +   T  
Sbjct: 248 MGISPVGFLVLPRMLALMLMLPLLCVYADIMGILGGSVIGVTMLDLSLIEYLEQTRKTLR 307

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L     G++KA      IG      G   G  + ++G+  T+ VV SI ++++ DS+   
Sbjct: 308 LGQCGQGILKASIFGVLIGYAGCLRGMQCGRSALAVGEATTSAVVTSIVLIVVSDSIITF 367

Query: 367 FYF 369
             +
Sbjct: 368 LLY 370


>gi|91203173|emb|CAJ72812.1| similar to ABC-type transport system permease protein [Candidatus
           Kuenenia stuttgartiensis]
          Length = 258

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 122/209 (58%), Gaps = 1/209 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++++   G     +V +I+  TG V++ Q  + L  +GAE++   ++S+  +RE+G +L
Sbjct: 42  LLKEIDNFGAGSFLLVNIIALFTGMVMSLQTIYGLRMYGAEMYVGSVVSLSIVRELGPVL 101

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           T++M+  R GS I AEIGSM++ E+IDA+R +G   ++ L+SP+I+A +I+LPLLT+ A+
Sbjct: 102 TSIMVGARIGSGIAAEIGSMQVTEQIDAMRALGASPIKKLVSPKIFAGLITLPLLTVTAD 161

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
           F  I G  I+     DI    + +   +T T+++  +G+ K  F    I ++    G   
Sbjct: 162 FIGIFGGLIIATFELDIDHIFYINSILTTITISDFISGIGKTVFFGLLIAVIGCYFGLKT 221

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
              +  +G+  T  VV +ISI I+I   F
Sbjct: 222 SGGTTGVGRSTTISVV-TISISILIADFF 249


>gi|15892052|ref|NP_359766.1| ABC transporter permease protein [Rickettsia conorii str. Malish 7]
 gi|34580917|ref|ZP_00142397.1| ABC transporter permease protein [Rickettsia sibirica 246]
 gi|229586334|ref|YP_002844835.1| ABC transporter permease protein [Rickettsia africae ESF-5]
 gi|81528535|sp|Q92JD8|Y129_RICCN RecName: Full=Probable ABC transporter permease protein RC0129
 gi|15619171|gb|AAL02667.1| ABC transporter permease protein [Rickettsia conorii str. Malish 7]
 gi|28262302|gb|EAA25806.1| ABC transporter permease protein [Rickettsia sibirica 246]
 gi|228021384|gb|ACP53092.1| ABC transporter permease protein [Rickettsia africae ESF-5]
          Length = 259

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 140/266 (52%), Gaps = 13/266 (4%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKG--FLLSLIRQMYYVGVS 166
           N+   +GK+ VKF     S +            F A S   +   +L  +IRQ+ ++G  
Sbjct: 4   NIANSVGKRTVKFAQSVGSFSLF---------SFAAVSSIIRPPLYLSLIIRQLLFIGFH 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTAVMIAGRSG 225
            +PVV + +F +GAV+A Q     S+F AE  SI  + +L L RE+G +L  +M+AGR G
Sbjct: 55  SLPVVAMTTFFSGAVLALQSYIGFSRFSAES-SIATVVVLSLTRELGPVLAGLMVAGRVG 113

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           ++I AEI +M++ E+IDA+ T+  D ++ L+ PR+   II++P L ++ +   ++G  +V
Sbjct: 114 ASIAAEIATMRVTEQIDALYTLSTDPIKYLVFPRVITAIITMPCLVLIGDIIGVMGGYLV 173

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                D   A + +         ++ +GL+KA      I I++   G+  G  +  +G+ 
Sbjct: 174 GVYKLDFNSAAYLTSTFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRA 233

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAI 371
            T+ VV S  +++I + L    +F +
Sbjct: 234 TTSAVVNSSILILISNYLITELFFKV 259


>gi|146281424|ref|YP_001171577.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas
           stutzeri A1501]
 gi|145569629|gb|ABP78735.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas
           stutzeri A1501]
          Length = 265

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 129/222 (58%), Gaps = 2/222 (0%)

Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209
            GF L L++Q+Y VGV  + +V++     G V+A QG   LS +G+E     ++++  LR
Sbjct: 43  NGFSL-LVKQLYSVGVLSLAIVVVSGIFIGMVLALQGYNILSSYGSEQAVGQMVALTLLR 101

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
           E+G ++TA++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +I+PR+WA  ISLPL
Sbjct: 102 ELGPVVTALLFAGRAGSALAAEIGNMKSTEQLSSLEMIGVDPLKYIIAPRLWAGFISLPL 161

Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVA 328
           LT++ N   I G ++V   +  +    F++   ++    +++  G+IK+   A  +  +A
Sbjct: 162 LTLIFNVVGIWGGAMVAVDWLGVYEGSFWANMQNSVDFHSDVLNGVIKSVVFALVVTWIA 221

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           + +G+     S  + +  T  VV +   V+ +D +     F 
Sbjct: 222 VFQGYDCEPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 263


>gi|195952743|ref|YP_002121033.1| protein of unknown function DUF140 [Hydrogenobaculum sp. Y04AAS1]
 gi|195932355|gb|ACG57055.1| protein of unknown function DUF140 [Hydrogenobaculum sp. Y04AAS1]
          Length = 246

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 120/213 (56%), Gaps = 1/213 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + ++ Y+G   VPVV+  S  TG V+A Q    L +F +E     L+++   RE+G +LT
Sbjct: 33  VDRVIYIGADTVPVVVTTSLFTGGVLALQTYSTLHKFNSEYLIGALVALSMGRELGPVLT 92

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           ++M+  R GSAI A IG+MK+ E+IDA+ T+ ++    + SP ++A ++ LPLLTIL++ 
Sbjct: 93  SLMVVARVGSAITASIGTMKVTEQIDALETLAINPYAYITSPILFACMVDLPLLTILSDI 152

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           S IIG  +V    + +   +++ +        +I+ GL KA      I  V+   GF   
Sbjct: 153 SGIIGGYLVSTIIFHVNGHMYWDKTKEIVDFYDIYGGLYKAFVYGIVIATVSNYFGFKTS 212

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDS-LFAIFY 368
             +  +G+  T+ VV S  +++I+D  L AI Y
Sbjct: 213 GGNQGVGRATTSSVVISSMLILILDYFLTAIIY 245


>gi|117919131|ref|YP_868323.1| hypothetical protein Shewana3_0679 [Shewanella sp. ANA-3]
 gi|117611463|gb|ABK46917.1| protein of unknown function DUF140 [Shewanella sp. ANA-3]
          Length = 261

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 124/222 (55%), Gaps = 2/222 (0%)

Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209
           KGF L L+RQ+Y VGV  + ++++     G V+A QG   L  FG E     ++++  LR
Sbjct: 40  KGFPL-LVRQIYVVGVQSMVIIVVSGLFIGMVLALQGYNILVGFGTEESLGPMVALSLLR 98

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
           E+G ++TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+PL
Sbjct: 99  ELGPVVTALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVISMPL 158

Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVA 328
           L ++     I G  +V  ++  I    F+S   ++     +I   LIK+   A  +  +A
Sbjct: 159 LALMFTAVGIYGGHLVGVEWKGIDGGAFWSILQASVEWRQDIVNCLIKSGVFAVVVTWIA 218

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  G+ V  +   + +  T+ VVQS   V+ +D L     F 
Sbjct: 219 LYRGYQVVPNPEGISRATTSTVVQSSLAVLALDFLLTALMFG 260


>gi|327479601|gb|AEA82911.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas
           stutzeri DSM 4166]
          Length = 265

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 129/222 (58%), Gaps = 2/222 (0%)

Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209
            GF L L++Q+Y VGV  + +V++     G V+A QG   LS +G+E     ++++  LR
Sbjct: 43  NGFSL-LVKQLYSVGVLSLAIVVVSGIFIGMVLALQGYNILSSYGSEQAVGQMVALTLLR 101

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
           E+G ++TA++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +I+PR+WA  ISLPL
Sbjct: 102 ELGPVVTALLFAGRAGSALAAEIGNMKSTEQLSSLEMIGVDPLKYIIAPRLWAGFISLPL 161

Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVA 328
           LT++ N   I G ++V   +  +    F++   ++    +++  G+IK+   A  +  +A
Sbjct: 162 LTLIFNVVGIWGGAMVAVDWLGVYEGSFWANMQNSVDFHSDVLNGVIKSVVFALVVTWIA 221

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           + +G+     S  + +  T  VV +   V+ +D +     F 
Sbjct: 222 VFQGYDCEPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 263


>gi|224827292|ref|ZP_03700385.1| protein of unknown function DUF140 [Lutiella nitroferrum 2002]
 gi|224600505|gb|EEG06695.1| protein of unknown function DUF140 [Lutiella nitroferrum 2002]
          Length = 261

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 121/214 (56%), Gaps = 1/214 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           IR++Y+ GV  + ++++     G V+  QG   LS+FG+      L+++  LRE+G +L 
Sbjct: 48  IREVYFAGVLSLIIIVVSGLFVGMVLGLQGYNTLSRFGSADALGALVALSLLRELGPVLA 107

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ A RSGSA+ AEIG MK  E++DA+  M ++ +  +++PR WA +IS+P+L  L N 
Sbjct: 108 ALLFASRSGSAMTAEIGLMKATEQLDAMSVMAVNPIARVVAPRFWAGVISMPVLAALFNV 167

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFAV 335
           + I G   V  +   +    F+S+  ++  L N +  GLIK+ F   A+ ++A+ EG+  
Sbjct: 168 TGIFGGYFVGVQLIGLDEGTFWSQMQNSVDLHNDVINGLIKSLFFGIAVTLIAVFEGYDA 227

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              +  +    T  VV S  +++ +D +   F F
Sbjct: 228 TPTAAGVSSATTRTVVTSALVILALDFVLTAFMF 261


>gi|85858832|ref|YP_461034.1| organic solvents resistance ABC transporter permease [Syntrophus
           aciditrophicus SB]
 gi|85721923|gb|ABC76866.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Syntrophus aciditrophicus
           SB]
          Length = 259

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 115/207 (55%), Gaps = 1/207 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +QM +VGV  + VV+L    TG V+A QG      F AE      +++   RE+G +LT+
Sbjct: 48  KQMEFVGVKSIFVVVLTGAFTGMVMALQGYHGFKMFSAESLVGATVALGMTRELGPVLTS 107

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +M+  R+GSA+ AE+G+M++ E+IDA+  M  + ++ LI PR+ A I+ LPLLT++++F 
Sbjct: 108 LMVTARAGSAMAAELGTMRVTEQIDALYVMAANPIQHLIVPRMIASILMLPLLTVVSDFV 167

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            I+G   V     +I   VF         L +I+ GLIKA      + ++   +GF    
Sbjct: 168 GILGGYFVGVSVLNINEGVFVKNITRIVELGDIYNGLIKAACFGLILSLIGCYKGFHARG 227

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLF 364
            +  +G+  T  VV S SI I++   F
Sbjct: 228 GAEGVGRATTEAVVLS-SISILVGDYF 253


>gi|15603974|ref|NP_220489.1| hypothetical protein RP096 [Rickettsia prowazekii str. Madrid E]
 gi|81554918|sp|Q9ZE51|Y096_RICPR RecName: Full=Probable ABC transporter permease protein RP096
 gi|3860665|emb|CAA14566.1| unknown [Rickettsia prowazekii]
 gi|292571688|gb|ADE29603.1| ABC transporter permease protein [Rickettsia prowazekii Rp22]
          Length = 259

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 131/231 (56%), Gaps = 22/231 (9%)

Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-RE 210
           +L  +IRQ+ ++G   +PVV + +F +GAV+A Q     S+F AE  SI  + +L L RE
Sbjct: 40  YLSLIIRQLLFIGFHSLPVVAMTTFFSGAVLALQSYTGFSRFSAE-NSIATVVVLSLTRE 98

Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
           +G +L  +++AGR G++I AEI +M++ E++DA+ T+  D ++ L+ PR+ A II++P L
Sbjct: 99  LGPVLAGLIVAGRVGASIAAEIATMRVTEQVDALYTLSTDPIKYLVCPRVIAAIITMPCL 158

Query: 271 TILANFSAIIGASIV-IWKYYDIPFAVFFSRFHSTATLANIF---------TGLIKAPFM 320
            ++ +   ++G  +V I+K            F+STA L + F         +GLIKA   
Sbjct: 159 VLIGDIIGVMGGYLVGIYKL----------DFNSTAYLTSTFQYLEPIDVISGLIKATVF 208

Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
              I I++   G+  G  +  +G+  T+ VV S  +++I + L    +F +
Sbjct: 209 GFIISIISCYSGYYSGKGAKGVGRATTSAVVNSSILILISNYLITELFFKV 259


>gi|325294995|ref|YP_004281509.1| hypothetical protein Dester_0809 [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065443|gb|ADY73450.1| protein of unknown function DUF140 [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 260

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 122/216 (56%), Gaps = 4/216 (1%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           +FK +L     Q+  +G   +PV+ + S  TG VIA +      +F AE     +++I  
Sbjct: 39  RFKHYLY----QLASIGTGSLPVIAITSLFTGGVIALETYEAFHRFNAEYMIGGVVAISM 94

Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267
            RE+G +LTA++I  RSGSA+ AEIG+MK+ E+IDA+R M ++ ++ LI+PR++  +I++
Sbjct: 95  ARELGPVLTALLITARSGSAMAAEIGTMKVTEQIDALRMMAVNPIKYLITPRVYTSVIAV 154

Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327
            LLTI+++    IG  IV    ++I   ++     + A + +++ GLIKA      I  +
Sbjct: 155 TLLTIISDIVGYIGGYIVSVVVFNINKTLYIRYTQNLAEMNDVYHGLIKAAIFGFLIATI 214

Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
           +   G+     +  +G+  T  VV S   ++I D L
Sbjct: 215 SCLYGYFTKGGAKGVGESTTKAVVVSSISILIFDYL 250


>gi|77361458|ref|YP_341033.1| ABC transporter membrane protein [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76876369|emb|CAI87591.1| putative transport protein (ABC superfamily, membrane)
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 260

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/215 (34%), Positives = 121/215 (56%), Gaps = 1/215 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LIRQ+Y VG   + ++++     G V+A QG   L  +GAE     L+++  LRE+G ++
Sbjct: 44  LIRQLYMVGSQSLLIIVVSGLFIGMVLALQGYTVLVGYGAEDSLGPLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D ++ +I+PR WA +IS+PLL ++ +
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAIDPLKRIIAPRFWAGLISMPLLALIFS 163

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334
             AIIGA +V   +  +    F+S   S  +   +I  G+IK+   A  +  +A+ +G+ 
Sbjct: 164 AVAIIGAHLVGVDWLGVDTGSFWSIMQSQVSFQQDILNGIIKSVVFAIVVTWIALYKGYD 223

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               S  + K  T  VV S   V+  D L     F
Sbjct: 224 CVPTSEGISKATTETVVHSSLAVLGFDFLLTAVMF 258


>gi|90580197|ref|ZP_01236004.1| hypothetical protein VAS14_19736 [Vibrio angustum S14]
 gi|90438499|gb|EAS63683.1| hypothetical protein VAS14_19736 [Vibrio angustum S14]
          Length = 260

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 122/216 (56%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q+Y VGV  + ++++     G V++ QG   L+ FGAE     ++++  LRE+G ++
Sbjct: 44  LIKQLYSVGVLSIAIILVSGLFIGMVLSLQGYLVLADFGAETSLGQMVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+PLL ++ +
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVIAPRFWAGVISMPLLALMFS 163

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              + GA IV   +  I +  F+S   S+   + +I   +IKA   A  +  +A+  G+ 
Sbjct: 164 VVGLWGAQIVGVDWKGIDYGSFWSVMQSSVNFSYDIGNSIIKAVAFAITVTWIAVFNGYD 223

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV S   V+ +D +     F 
Sbjct: 224 AVPTSEGISRATTRTVVNSSLAVLGLDFILTALMFG 259


>gi|113969024|ref|YP_732817.1| hypothetical protein Shewmr4_0680 [Shewanella sp. MR-4]
 gi|114048831|ref|YP_739381.1| hypothetical protein Shewmr7_3342 [Shewanella sp. MR-7]
 gi|113883708|gb|ABI37760.1| protein of unknown function DUF140 [Shewanella sp. MR-4]
 gi|113890273|gb|ABI44324.1| protein of unknown function DUF140 [Shewanella sp. MR-7]
          Length = 261

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 124/222 (55%), Gaps = 2/222 (0%)

Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209
           KGF L L+RQ+Y VGV  + ++++     G V+A QG   L  FG E     ++++  LR
Sbjct: 40  KGFPL-LVRQIYVVGVQSMVIIVVSGLFIGMVLALQGYNILVGFGTEESLGPMVALSLLR 98

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
           E+G ++TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+PL
Sbjct: 99  ELGPVVTALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVISMPL 158

Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVA 328
           L ++     I G  +V  ++  I    F+S   ++     +I   LIK+   A  +  +A
Sbjct: 159 LALMFTAVGIYGGHLVGVEWKGIDGGAFWSILQASVEWRQDIVNCLIKSGVFAVVVTWIA 218

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  G+ V  +   + +  T+ VVQS   V+ +D L     F 
Sbjct: 219 LYRGYQVVPNPEGISRATTSTVVQSSLAVLALDFLLTALMFG 260


>gi|226939556|ref|YP_002794629.1| ABC transport system permease protein [Laribacter hongkongensis
           HLHK9]
 gi|226714482|gb|ACO73620.1| putative ABC transport system permease protein [Laribacter
           hongkongensis HLHK9]
          Length = 371

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/206 (35%), Positives = 123/206 (59%), Gaps = 1/206 (0%)

Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219
           M   G   +P+V+LI F+ G ++A Q       FGA +  ++ + I  LRE+G L+TA++
Sbjct: 158 MASAGTQALPIVLLIGFLMGTILAFQMGLVAQGFGAGLLVVNGIGIAMLRELGPLMTAIV 217

Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279
            AGRSG+A  AE+G+ K+NEEI A+ T G+D V  L+ PR+ A ++ LPLLT+LA+   +
Sbjct: 218 FAGRSGAAFAAELGTQKVNEEIYALHTFGIDPVAFLVLPRLVAAVLVLPLLTVLADVIGL 277

Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339
           +G ++V+  +   P   F+ +  +T +L +++ GL K+      I  +  ++G + G   
Sbjct: 278 LGGALVMQAFSVTPMQ-FYHQTLATVSLTDLYFGLGKSMVFGLFIAQIGCRQGLSAGQGP 336

Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFA 365
            ++G   T  VV S+  +++ID LFA
Sbjct: 337 TAVGVAATRAVVSSLIWIVVIDGLFA 362


>gi|51473253|ref|YP_067010.1| ABC transporter permease protein [Rickettsia typhi str. Wilmington]
 gi|81390296|sp|Q68XW4|Y041_RICTY RecName: Full=Probable ABC transporter permease protein RT0041
 gi|51459565|gb|AAU03528.1| ABC transporter permease protein [Rickettsia typhi str. Wilmington]
          Length = 259

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/221 (35%), Positives = 129/221 (58%), Gaps = 24/221 (10%)

Query: 154 LSLI-RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REI 211
           LSLI RQ+ ++G   +PVV + +F +GAV+A Q     S+F AE  SI  + +L L RE+
Sbjct: 41  LSLIMRQLLFIGFHSLPVVAMTTFFSGAVLALQSYTGFSRFSAE-NSIATVVVLSLTREL 99

Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271
           G +L  +++AGR G++I AEI +MK+ E++DA+ T+  D ++ L+ PR+ A II++P L 
Sbjct: 100 GPVLAGLIVAGRVGASIAAEIATMKVTEQVDALYTLSTDPIKYLVCPRVIAAIITMPCLV 159

Query: 272 ILANFSAIIGASIV-IWKYYDIPFAVFFSRFHSTATLANIF---------TGLIKAPFMA 321
           ++ +   ++G  +V I+K            F+STA L + F         +GL+KA    
Sbjct: 160 LIGDVIGVMGGYLVGIYKL----------NFNSTAYLTSTFQYLELIDVISGLVKATVFG 209

Query: 322 CAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
             I I++   G+  G  +  +G+  T+ VV S SI+I+I +
Sbjct: 210 FIISIISCYSGYYSGKGAKGVGRATTSAVVNS-SILILISN 249


>gi|157828003|ref|YP_001494245.1| ABC transporter permease protein [Rickettsia rickettsii str.
           'Sheila Smith']
 gi|165932699|ref|YP_001649488.1| ABC transporter permease [Rickettsia rickettsii str. Iowa]
 gi|157800484|gb|ABV75737.1| ABC transporter permease protein [Rickettsia rickettsii str.
           'Sheila Smith']
 gi|165907786|gb|ABY72082.1| ABC transporter permease protein [Rickettsia rickettsii str. Iowa]
          Length = 259

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 140/266 (52%), Gaps = 13/266 (4%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKG--FLLSLIRQMYYVGVS 166
           N+   +GK+ VKF     S +            F A S   +   +L  +IRQ+ ++G  
Sbjct: 4   NIANSVGKRTVKFAQSVGSFSLF---------SFAAVSSIIRPPLYLSLIIRQLLFIGFH 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTAVMIAGRSG 225
            +PVV + +F +GAV+A Q     S+F AE  SI  + +L L RE+G +L  +M+AGR G
Sbjct: 55  SLPVVAMTTFFSGAVLALQSYIGFSRFSAES-SIATVVVLSLTRELGPVLAGLMVAGRVG 113

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           ++I AEI +M++ E++DA+ T+  D ++ L+ PR+   II++P L ++ +   ++G  +V
Sbjct: 114 ASIAAEIATMRVTEQVDALYTLSTDPIKYLVFPRVITAIITMPCLVLIGDIIGVMGGYLV 173

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                D   A + +         ++ +GL+KA      I I++   G+  G  +  +G+ 
Sbjct: 174 GVYKLDFNSAAYLTSTFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRA 233

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAI 371
            T+ VV S  +++I + L    +F +
Sbjct: 234 TTSAVVNSSILILISNYLITELFFKV 259


>gi|24375440|ref|NP_719483.1| hypothetical protein SO_3953 [Shewanella oneidensis MR-1]
 gi|24350284|gb|AAN56927.1|AE015826_12 conserved hypothetical protein TIGR00056 [Shewanella oneidensis
           MR-1]
          Length = 261

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 124/222 (55%), Gaps = 2/222 (0%)

Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209
           KGF L L+RQ+Y VGV  + ++++     G V+A QG   L  FG E     ++++  LR
Sbjct: 40  KGFPL-LVRQIYVVGVQSMVIIVVSGLFIGMVLALQGYNILVGFGTEESLGPMVALSLLR 98

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
           E+G ++TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+PL
Sbjct: 99  ELGPVVTALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVISMPL 158

Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVA 328
           L ++     I G  +V  ++  I    F+S   ++     +I   LIK+   A  +  +A
Sbjct: 159 LALMFTAVGIYGGHLVGVEWKGIDSGAFWSILQASVEWRQDIVNCLIKSGVFAVVVTWIA 218

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  G+ V  +   + +  T+ VVQS   V+ +D L     F 
Sbjct: 219 LYRGYQVIPNPEGISRATTSTVVQSSLAVLALDFLLTALMFG 260


>gi|328953206|ref|YP_004370540.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM
           11109]
 gi|328453530|gb|AEB09359.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM
           11109]
          Length = 256

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 138/261 (52%), Gaps = 7/261 (2%)

Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167
           K+L   +G+  + FI ++      L       G F    YK      +L++Q+Y +GV  
Sbjct: 2   KDLLRTLGRATIDFIQEAGRMQLFL---FQTLGLFFLPPYK----PFNLVKQVYVIGVRS 54

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
             +++L +  TG V+  QG + L +FGAE      +++  +RE+G +LTA+M+ GR+GSA
Sbjct: 55  SSIILLTAMFTGMVLGLQGYYTLRKFGAESALGSAVALSLIRELGPVLTALMVTGRAGSA 114

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I AEIG M+I E++DA+ TM ++ ++ ++ P++ A +I++PLLT   +F  I+G  +V  
Sbjct: 115 ITAEIGIMRITEQLDALDTMAINPMQYVVMPKVIAGLIAVPLLTAFFDFVGIVGGYLVGV 174

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
               +    +FS    +    ++  G +K+      + +VA  +G+     +  + +  T
Sbjct: 175 VMLGVSSGSYFSGMIQSVETLDVNGGFVKSIVFGLTVTLVACYKGYFTSHGAEGVSQSTT 234

Query: 348 TCVVQSISIVIIIDSLFAIFY 368
             VV +  +++  D +   F+
Sbjct: 235 EAVVLAAILILGWDYVLTSFF 255


>gi|152999232|ref|YP_001364913.1| hypothetical protein Shew185_0693 [Shewanella baltica OS185]
 gi|160873845|ref|YP_001553161.1| hypothetical protein Sbal195_0723 [Shewanella baltica OS195]
 gi|217971905|ref|YP_002356656.1| hypothetical protein Sbal223_0714 [Shewanella baltica OS223]
 gi|304411204|ref|ZP_07392819.1| protein of unknown function DUF140 [Shewanella baltica OS183]
 gi|307306499|ref|ZP_07586242.1| protein of unknown function DUF140 [Shewanella baltica BA175]
 gi|151363850|gb|ABS06850.1| protein of unknown function DUF140 [Shewanella baltica OS185]
 gi|160859367|gb|ABX47901.1| protein of unknown function DUF140 [Shewanella baltica OS195]
 gi|217497040|gb|ACK45233.1| protein of unknown function DUF140 [Shewanella baltica OS223]
 gi|304350397|gb|EFM14800.1| protein of unknown function DUF140 [Shewanella baltica OS183]
 gi|306910790|gb|EFN41218.1| protein of unknown function DUF140 [Shewanella baltica BA175]
 gi|315266072|gb|ADT92925.1| protein of unknown function DUF140 [Shewanella baltica OS678]
          Length = 261

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/222 (34%), Positives = 123/222 (55%), Gaps = 2/222 (0%)

Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209
           KGF L L+RQ+Y VGV  + ++++     G V+A QG   L  FG E     ++++  LR
Sbjct: 40  KGFPL-LVRQIYVVGVQSMVIILVSGLFIGMVLALQGYNILVGFGTEESLGPMVALSLLR 98

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
           E+G ++TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+PL
Sbjct: 99  ELGPVVTALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVISMPL 158

Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVA 328
           L ++     I G  IV  ++  I    F+S   ++     +I   LIK+   A  +  +A
Sbjct: 159 LALMFTAVGIYGGHIVGVEWKGIDSGAFWSILQASVEWRQDIVNCLIKSGVFAVVVTWIA 218

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  G+ V  +   + +  T  VVQS   V+ +D L     F 
Sbjct: 219 LYRGYQVIPNPEGISRATTQTVVQSSLAVLALDFLLTALMFG 260


>gi|126175856|ref|YP_001052005.1| hypothetical protein Sbal_3661 [Shewanella baltica OS155]
 gi|125999061|gb|ABN63136.1| protein of unknown function DUF140 [Shewanella baltica OS155]
          Length = 261

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/222 (34%), Positives = 123/222 (55%), Gaps = 2/222 (0%)

Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209
           KGF L L+RQ+Y VGV  + ++++     G V+A QG   L  FG E     ++++  LR
Sbjct: 40  KGFPL-LVRQIYVVGVQSMVIILVSGLFIGMVLALQGYNILVGFGTEESLGPMVALSLLR 98

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
           E+G ++TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+PL
Sbjct: 99  ELGPVVTALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVISMPL 158

Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVA 328
           L ++     I G  IV  ++  I    F+S   ++     +I   LIK+   A  +  +A
Sbjct: 159 LALMFTAVGIYGGHIVGVEWKGIDSGAFWSILQASVEWRQDIVNCLIKSGVFAVVVTWIA 218

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  G+ V  +   + +  T  VVQS   V+ +D L     F 
Sbjct: 219 LYRGYQVIPNPEGISRATTQTVVQSSLAVLALDFLLTALMFG 260


>gi|89075259|ref|ZP_01161686.1| hypothetical protein SKA34_22619 [Photobacterium sp. SKA34]
 gi|89048940|gb|EAR54508.1| hypothetical protein SKA34_22619 [Photobacterium sp. SKA34]
          Length = 260

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 122/216 (56%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q+Y VGV  + ++I+     G V++ QG   L+ FGAE     ++++  LRE+G ++
Sbjct: 44  LIKQLYSVGVLSIAIIIVSGLFIGMVLSLQGYLVLAGFGAETSLGQMVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+PLL ++ +
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVIAPRFWAGVISMPLLALMFS 163

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              + GA +V   +  I +  F+S   S+   + +I   +IKA   A  +  +A+  G+ 
Sbjct: 164 VVGLWGAQVVGVDWKGIDYGSFWSVMQSSVNFSYDIGNSIIKAVAFAITVTWIAVFNGYD 223

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV S   V+ +D +     F 
Sbjct: 224 AVPTSEGISRATTRTVVNSSLAVLGLDFILTALMFG 259


>gi|253995674|ref|YP_003047738.1| hypothetical protein Mmol_0301 [Methylotenera mobilis JLW8]
 gi|253982353|gb|ACT47211.1| protein of unknown function DUF140 [Methylotenera mobilis JLW8]
          Length = 267

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 143/268 (53%), Gaps = 8/268 (2%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
           N F      +G +++  I    + A +  L I+ +GE       F+ F L+L R++Y+ G
Sbjct: 7   NMFSRFLSGVGNRMIARIWRLGAGARLFMLAIAYSGE------SFRRFHLTL-REVYFTG 59

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
           V  + ++I+ +F  G V+A QG   L ++G+      L+++  +RE+G ++TA++ AGR+
Sbjct: 60  VMSLLIIIVSAFFVGMVLALQGYNTLQKYGSSEAIGVLVALALVRELGPVVTALLFAGRA 119

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           G+AI AEIG MK  E++ A+  M ++ +  +++PR WA +IS+P+L  L +   ++G  +
Sbjct: 120 GTAITAEIGLMKTTEQLSAMEMMAVNPIARVVAPRFWAGVISMPILAALFSMVGVLGGYL 179

Query: 285 VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           V      +    F+S+  +   + A+I  G+IK+     A  ++A+ EGF     +  + 
Sbjct: 180 VAVPLIGVDDGAFWSQMQANVDVRADIINGVIKSVVFGVACTMIALFEGFDAPPTAEGVS 239

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFAI 371
              T  VV S   V+ +D +   F   +
Sbjct: 240 HATTRTVVISSLTVLFLDFVLTSFMLVV 267


>gi|157825268|ref|YP_001492988.1| ABC transporter permease protein [Rickettsia akari str. Hartford]
 gi|157799226|gb|ABV74480.1| ABC transporter permease protein [Rickettsia akari str. Hartford]
          Length = 259

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 148/280 (52%), Gaps = 41/280 (14%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEF-------CASSYKFKGFLLSLIRQMY 161
           N+   +GK+ +K     C+Q         + G F        +S+ +   +L  +IRQ+ 
Sbjct: 4   NIANLVGKRTIK-----CAQ---------SVGSFSLFSFAAVSSTIRPPLYLSLIIRQLL 49

Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTAVMI 220
           ++G   +PVV + +F +GAV+A Q     S+F AE  SI  + +L L RE+G +L  +M+
Sbjct: 50  FIGFHSLPVVAMTTFFSGAVLALQSYTGFSRFSAE-NSIATVVVLSLTRELGPVLAGLMV 108

Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280
           +GR G++I AEI +M++ E++DA+ T+  D ++ L+ PR+ A I+++P L ++ +   ++
Sbjct: 109 SGRVGASIAAEIATMRVTEQVDALYTLSTDPIKYLVFPRVIATIVTMPCLVLIGDIIGVM 168

Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLA---------NIFTGLIKAPFMACAIGIVAMKE 331
           G  +V          V+   F+STA L          ++ +GL+KA      I I++   
Sbjct: 169 GGYLV---------GVYKLDFNSTAYLTSTLHYLEPIDVISGLVKAGVFGFIISIISCYS 219

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           G+  G  +  +G+  T+ VV S  I++I + L    +F +
Sbjct: 220 GYYSGKGAKGVGRATTSAVVNSSIIILISNYLITELFFKV 259


>gi|51246140|ref|YP_066024.1| toluene ABC-transporter, permease protein [Desulfotalea
           psychrophila LSv54]
 gi|50877177|emb|CAG37017.1| related to toluene ABC-transporter, permease protein [Desulfotalea
           psychrophila LSv54]
          Length = 262

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 133/244 (54%), Gaps = 20/244 (8%)

Query: 136 ISNTGEFC-------ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
           ++N G FC          ++    +  ++  ++++G   + VVIL  F TG V+A QG +
Sbjct: 17  VTNLGRFCLFLLTGIGQIFQKPFQIFRIVENIWFIGTKSMAVVILTGFFTGMVLALQGYY 76

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L++FG+       +++  +RE+G +LTA+MI  R+GSA+ AEIG+M+I+E++DA++TM 
Sbjct: 77  ALAKFGSAGMLGSAVALTLIRELGPVLTAIMITARAGSAMAAEIGTMRISEQLDALQTMD 136

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ V+ + SPR+ A II  PLLT + +   I G  + I     +   ++  R H +  + 
Sbjct: 137 INPVKFVFSPRLIASIICFPLLTSIFDVVGIFGG-LFIATTLKVNGYIYMYRVHESVVME 195

Query: 309 NIFTGLIKAPFMA-------CAIGIVA--MKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           +I +G+IK+   A       C  G  A   KEG   G  S ++    T  VV S  +++I
Sbjct: 196 DIRSGIIKSLVFAVVVVSTCCFKGYYAHIQKEG---GFGSRAVSLATTNAVVSSSVLILI 252

Query: 360 IDSL 363
            D L
Sbjct: 253 YDYL 256


>gi|291287315|ref|YP_003504131.1| hypothetical protein Dacet_1405 [Denitrovibrio acetiphilus DSM
           12809]
 gi|290884475|gb|ADD68175.1| protein of unknown function DUF140 [Denitrovibrio acetiphilus DSM
           12809]
          Length = 256

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/214 (30%), Positives = 120/214 (56%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q+ ++G + + V+IL    TG V A Q      +FGAE     ++++   RE+G +L
Sbjct: 43  LIKQIEFIGANSLSVIILTGSFTGMVFAFQSYIGFHKFGAEQIVGTVVALGMARELGPVL 102

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           +A+M+A R+GSAI AEIG+MK+ E++DA+  + +D V+ L  PRI A +I +P+L  +A 
Sbjct: 103 SAIMVAARAGSAITAEIGTMKVTEQVDALNALAVDPVQYLFVPRILAGLIVMPMLNAIAV 162

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
           F  ++G  +V      I   ++ +  +     ++ F+G++KA      + +V   +G+  
Sbjct: 163 FCGMVGGFLVSITVLGINKTLYLNYMYQYIEFSDFFSGMVKAFVFGGIVTLVGCYKGYMT 222

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              +  +GK  T  VV +  ++++ D +   F F
Sbjct: 223 TGGAEGVGKSTTESVVLACILILVFDYILTAFMF 256


>gi|52425767|ref|YP_088904.1| hypothetical protein MS1712 [Mannheimia succiniciproducens MBEL55E]
 gi|52307819|gb|AAU38319.1| unknown [Mannheimia succiniciproducens MBEL55E]
          Length = 260

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 121/217 (55%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q+Y +GV  + +++L  F  G V+  QG   L  F AE     L+++  LRE+G ++
Sbjct: 44  LIKQLYVLGVQSLLIILLSGFFIGMVLGLQGYVILVDFAAEANVGQLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +I++P+LT+L  
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPVLTVLFT 163

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              IIG  ++  ++  I    F+S   +     +++ G IK+   A  +  +A+  G+  
Sbjct: 164 AVGIIGGHLIGVEWKGIDSGSFWSVMQNAVRTLDLWDGFIKSLVFAFTVTWIALFNGYDC 223

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
              S  + +  T  VV +  +V+ +D +     F  G
Sbjct: 224 IPTSEGISQATTRTVVNASLLVLGLDFVLTAIMFGAG 260


>gi|118579001|ref|YP_900251.1| hypothetical protein Ppro_0562 [Pelobacter propionicus DSM 2379]
 gi|118501711|gb|ABK98193.1| protein of unknown function DUF140 [Pelobacter propionicus DSM
           2379]
          Length = 256

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 118/206 (57%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +++Q+ ++G   + V+ L +  TG V+  QG + L++FG+E      +++  +RE+G +L
Sbjct: 43  VLKQLSFIGAKSLFVIFLTAAFTGMVLGLQGYYTLTKFGSEGMLGTAVALSLIRELGPVL 102

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA+M+ GR+GSAI AEIG M+I E+IDA+ TM LD  + LI+P++ A +I+LPLL  + +
Sbjct: 103 TALMVTGRAGSAIAAEIGIMRITEQIDALETMALDPFKYLITPKLIAAMIALPLLCAIFD 162

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              I G  +V  K   +    +FS    +    ++++G  K+      I  +   +G+  
Sbjct: 163 TIGIYGGWLVGVKLLGVNPGAYFSEMEKSVVWRDVYSGFAKSFSFGVIIAWIGCYKGYFA 222

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361
           G  +  + K  T  VV +  ++++ D
Sbjct: 223 GHGAEGVSKATTEAVVLTSVLILVWD 248


>gi|294139194|ref|YP_003555172.1| hypothetical protein SVI_0423 [Shewanella violacea DSS12]
 gi|293325663|dbj|BAJ00394.1| conserved hypothetical protein [Shewanella violacea DSS12]
          Length = 258

 Score =  114 bits (285), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 123/224 (54%), Gaps = 2/224 (0%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           + KGF L  ++Q+Y VGV  + ++++     G V+A QG   L  FG E     ++++  
Sbjct: 35  RLKGFSL-FVKQLYVVGVQSMVLILISGLFIGMVLALQGYNILVGFGTEESLGPMVALSL 93

Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267
           LRE+G ++TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA ++SL
Sbjct: 94  LRELGPVVTALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVVSL 153

Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGI 326
           PLLT++     I G  +V  ++  I    F+S   ++     +I   LIK+      +  
Sbjct: 154 PLLTLMFTAVGIYGGHLVGVEWKGIDSGSFWSILQASVEWRQDIVNCLIKSFLFGIVVTW 213

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +A+  G+ V  +   + K  T  VVQS   V+ +D L     F 
Sbjct: 214 IALYRGYQVTPNPEGISKATTQTVVQSSLAVLALDFLLTALMFG 257


>gi|294669772|ref|ZP_06734838.1| hypothetical protein NEIELOOT_01672 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308338|gb|EFE49581.1| hypothetical protein NEIELOOT_01672 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 258

 Score =  114 bits (285), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 144/263 (54%), Gaps = 10/263 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           NL   +G K + FI    S    L  +++++G    S  +F+   LS +RQ+Y+ GV  V
Sbjct: 2   NLIRTVGAKTLGFIQALGSVCLFLLQILAHSGT---SLLRFR---LS-VRQVYFAGVLSV 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
            ++ +     G V+  QG  QL++F  A+I    + + L LRE+G +L A++ A  +G A
Sbjct: 55  LIIAVSGLFVGMVLGLQGYTQLAKFKSADILGYMVAASL-LRELGPVLAAILFASSAGGA 113

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + +EIG MK  E+++A+  M ++ V  +++PR WA + S+PLL  + N + I GA +V  
Sbjct: 114 MTSEIGLMKATEQLEAMNVMAINPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGV 173

Query: 288 KYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
           ++  +   +F+S+  +  +   ++  GLIK+ F   A+ ++A+ +GF     S  + +  
Sbjct: 174 QWLGLDGGIFWSQMQNNISFGYDVLNGLIKSAFFGVAVTLIAVHQGFHALPTSEGILRAS 233

Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369
           T  VV S  +V+ ID +   F F
Sbjct: 234 TRTVVSSALVVLAIDFILTAFMF 256


>gi|119469173|ref|ZP_01612157.1| putative transport protein (ABC superfamily, membrane)
           [Alteromonadales bacterium TW-7]
 gi|119447425|gb|EAW28693.1| putative transport protein (ABC superfamily, membrane)
           [Alteromonadales bacterium TW-7]
          Length = 259

 Score =  114 bits (285), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 116/199 (58%), Gaps = 1/199 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y VG   + ++++     G V+A QG   L  +GAE     L+++  LRE+G ++
Sbjct: 43  LVRQLYMVGSQSLLIIMVSGLFIGMVLALQGYTVLVGYGAEDSLGPLVALSLLRELGPVV 102

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D ++ +I+PR WA  IS+PLL I+ +
Sbjct: 103 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAIDPLKRIIAPRFWAGFISMPLLAIIFS 162

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334
             AIIGA +V   +  +    F+S   S  +  A++  G+IK+   A  +  +A+ +G+ 
Sbjct: 163 AVAIIGAHLVGVDWLGVDTGSFWSIMQSQVSFQADVLNGIIKSFVFAIVVTWIALYKGYD 222

Query: 335 VGVHSNSLGKKVTTCVVQS 353
               S  + K  T  VV S
Sbjct: 223 CVPTSEGISKATTETVVHS 241


>gi|39996998|ref|NP_952949.1| transporter [Geobacter sulfurreducens PCA]
 gi|39983886|gb|AAR35276.1| transporter, putative [Geobacter sulfurreducens PCA]
 gi|298506015|gb|ADI84738.1| transporter membrane protein of unknown function DUF140 [Geobacter
           sulfurreducens KN400]
          Length = 257

 Score =  114 bits (285), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 117/211 (55%), Gaps = 2/211 (0%)

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           L S+  QM  +G   VP+  +++F  G V+A Q   +L ++G +     ++ +  +RE+G
Sbjct: 39  LPSIFNQMAIIGYETVPIASVMAFFVGMVLALQTGVELQKYGTQNIIGGIVGLSMVRELG 98

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            ++T+ ++AGR GSA+ AEIG MK+ EEIDA++T+ ++ VR L  PR+ A ++ +P L I
Sbjct: 99  PVMTSFLVAGRVGSAMAAEIGVMKVYEEIDALKTLDINPVRYLAMPRLIACLVCVPALVI 158

Query: 273 LANFSAIIGASIVIWKYYD--IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330
            AN   I+G +I+   +    I ++ ++    +   L  +  GL+KA      I +VA  
Sbjct: 159 FANAVGIVGGAIMSHLHPKIFISYSTYYDSLKTALKLKEVGAGLVKATVFGGIIALVACY 218

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            GF     +  + +  T  VV S  ++++ D
Sbjct: 219 TGFKTSGGARGIAQATTRAVVLSFMLILVAD 249


>gi|257465526|ref|ZP_05629897.1| permease [Actinobacillus minor 202]
 gi|257451186|gb|EEV25229.1| permease [Actinobacillus minor 202]
          Length = 260

 Score =  114 bits (285), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 118/206 (57%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q+Y VGV  + +++L     G V+  QG   L  F AE     L+S+  LRE+G ++
Sbjct: 43  LIKQLYVVGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFAAETSLGTLVSLSLLRELGPVV 102

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+P+L ++  
Sbjct: 103 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRIIAPRFWAGVISMPILAVIFT 162

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              I G S+V   +  +    F+S   ++ + +++  G IK+   A A+  +A+  G+  
Sbjct: 163 AIGIWGGSLVGVDWKGVDSGSFWSVMQNSVSASDLINGFIKSIIFAFAVVWIALFNGYDS 222

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361
              S  + +  T  VV +  +++ +D
Sbjct: 223 TATSEGISQATTKTVVNASLVILGLD 248


>gi|219870961|ref|YP_002475336.1| resistance to organic solvents ABC transporter permease
           [Haemophilus parasuis SH0165]
 gi|219691165|gb|ACL32388.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Haemophilus parasuis
           SH0165]
          Length = 257

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 121/216 (56%), Gaps = 4/216 (1%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I+Q++ +GV  + +++L     G V+  QG   L  F AE     L+S+  LRE+G ++T
Sbjct: 43  IKQLHVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVSLSLLRELGPVVT 102

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA II++P+L ++   
Sbjct: 103 ALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGIIAMPILAVIFTA 162

Query: 277 SAIIGASI--VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
             I G S+  V WK  D+    F+S   ST T+ ++  G IK+   A A+  +A+  G+ 
Sbjct: 163 IGIWGGSLVGVDWKGVDV--GSFWSVMQSTVTMGDLLNGFIKSIVFAFAVVWIALFNGYD 220

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV +  +++ +D +     F 
Sbjct: 221 ALPTSEGISQATTRTVVHASLVILGLDFILTAIMFG 256


>gi|254513828|ref|ZP_05125889.1| ABC transporter permease protein [gamma proteobacterium NOR5-3]
 gi|219676071|gb|EED32436.1| ABC transporter permease protein [gamma proteobacterium NOR5-3]
          Length = 369

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 175/338 (51%), Gaps = 19/338 (5%)

Query: 42  VDLSAITEIDT-IGAELIMYFMEKYHGKIKLQ--GVSTHIEQLFSLISFTHRKKIKNQKP 98
           VD++++T  D  + A+L+      Y G+ +L+  G      QLF L +            
Sbjct: 45  VDVTSVTVWDPRLEAKLLHLQRLAYAGQRQLELLGTPDSQTQLFKLATAVAPYAGTAATS 104

Query: 99  QRSFFYNSFKNLHYHIGKKIVK---FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLS 155
              F   + ++    IG  +++   F+  + S   +L  ++  +G       + + F+ S
Sbjct: 105 SGLFTLKNLRSTLADIGDDLLESLEFLGATTS--AVLRTLLGRSG------MRRREFIES 156

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L +     G   + ++ L S + G ++A  GA QL QFGA +F  DL++I  LRE+G L+
Sbjct: 157 LAQ----AGPQAMGIITLTSVLVGMILAYLGAAQLQQFGAAVFVADLVAIGMLREMGALM 212

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA+++AGR+G+A  A++ +M+ NEEIDAI T+G++ +  L+ PR+ AL++ +PLL + A+
Sbjct: 213 TAIVMAGRTGAAYAAQLSTMQTNEEIDAITTLGINPLEFLVVPRMLALLLMMPLLVVYAD 272

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              I+G ++V       P   + S+  S  T+ +   G++K    A  I I   + G   
Sbjct: 273 ALGIVGGAVVAGGMGVTPLQ-YISQLDSAITITHFLVGVVKGLIFALLIAIAGCRAGMNA 331

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           G +S ++G+  T  VV ++  +I+ D+   I    +GI
Sbjct: 332 GRNSEAVGRATTEAVVTAVVYLIVADAAINILCQLLGI 369


>gi|114332197|ref|YP_748419.1| hypothetical protein Neut_2236 [Nitrosomonas eutropha C91]
 gi|114309211|gb|ABI60454.1| protein of unknown function DUF140 [Nitrosomonas eutropha C91]
          Length = 381

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 193/383 (50%), Gaps = 34/383 (8%)

Query: 2   SENGITVFRFAGNWK----SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAEL 57
           +E G +  +  G++     +P +  +A ++    ++         DL+ I ++D  GA +
Sbjct: 18  TEAGNSCLQLTGSYTLVSLNPSLPAVARELAQLASQP----GLYWDLTNIHQLDYAGAVM 73

Query: 58  IMY-FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP-QRSFFYNSFKNLHYHIG 115
           +   + E+    + L+      EQ+F  +     K +   +P QR +F          +G
Sbjct: 74  LWQIWGEQRPDHLLLR---PEQEQMFQRL----EKVVSLPEPTQRKWFLPVSL-----LG 121

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCAS-----SYKFKGFLLSLIRQMYYVGVSGVPV 170
           +++++F +      H+ G+ IS +G+         ++  +  +  +   +Y  G   + +
Sbjct: 122 QQLLRFFD------HLAGM-ISLSGQIVLDIVYLMTHPSRIPVREISANLYRTGAQALGI 174

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
             ++ F+ G V++   + QL   GA+I+ ++++ +  +RE+G +L A+++AGRSGSA+ A
Sbjct: 175 TAIVGFLIGIVLSYLSSEQLHMLGADIYIVNILGMSIIRELGPMLAAILVAGRSGSAMTA 234

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           ++G M++ EE+DA+  MG+     L+  +I  L ++LPL+ +  +  A++G  +      
Sbjct: 235 QLGVMRVTEELDALTVMGIPHSLRLVLSKIIGLSLALPLIVLWTSSVALLGGLLAADLQV 294

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
            +      +       +AN++ GL K      AI ++A   G  +  ++ SLG+  T  V
Sbjct: 295 GLSIRYAVTTLPDAVPIANLWLGLGKGVVCGMAIALIACHFGLRIKPNTESLGEGTTNSV 354

Query: 351 VQSISIVIIIDSLFAIFYFAIGI 373
           V SI+ VIIID++FA+ + +IGI
Sbjct: 355 VTSITAVIIIDAIFAVAFSSIGI 377


>gi|240948315|ref|ZP_04752701.1| permease [Actinobacillus minor NM305]
 gi|240297354|gb|EER47895.1| permease [Actinobacillus minor NM305]
          Length = 258

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 120/215 (55%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q+Y VGV  + +++L     G V+  QG   L  F AE     L+S+  LRE+G ++
Sbjct: 43  LIKQLYVVGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFAAETSLGTLVSLSLLRELGPVV 102

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+P+L ++  
Sbjct: 103 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRIIAPRFWAGVISMPILAVIFT 162

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              I G S+V   +  +    F+S   ++ + +++  G IK+   A A+  +A+  G+  
Sbjct: 163 AIGIWGGSLVGVDWKGVDSGSFWSVMQNSVSASDLINGFIKSIIFAFAVVWIALFNGYDS 222

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
              S  + +  T  VV +  +++ +D +     F 
Sbjct: 223 TATSEGISQATTKTVVNASLVILGLDFILTAIMFG 257


>gi|239904657|ref|YP_002951395.1| putative ABC transporter permease protein [Desulfovibrio magneticus
           RS-1]
 gi|239794520|dbj|BAH73509.1| putative ABC transporter permease protein [Desulfovibrio magneticus
           RS-1]
          Length = 256

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 119/208 (57%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I  + +VG   + +V +I+   G +++ Q A QL + GA  +  +L+    + E+G LLT
Sbjct: 41  ISHLAWVGADSLAIVSVIAACVGIILSLQAAIQLEKVGAMSYVANLVGFSLVTELGPLLT 100

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
            ++++GR+G+A  AEI +M+I+EEIDA+  MG+D VR L+ P+  A+ +  PLLT+ A+ 
Sbjct: 101 CLILSGRAGAAFTAEIATMRISEEIDALAVMGIDPVRFLVWPKFVAMAVMAPLLTLWADA 160

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
             I    I       +   V+F++        ++ +GL+K+     AI +++  +GF   
Sbjct: 161 VGITAGGIFSSLALGLSGKVYFNQIAYFLGFKDLLSGLVKSAGFGVAITVISCWQGFLAR 220

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             +  +G++ T  VVQSI ++I++D  F
Sbjct: 221 EGAADVGRRTTAAVVQSIFVMILLDLFF 248


>gi|167854684|ref|ZP_02477464.1| hypothetical protein HPS_01292 [Haemophilus parasuis 29755]
 gi|167854221|gb|EDS25455.1| hypothetical protein HPS_01292 [Haemophilus parasuis 29755]
          Length = 258

 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 121/216 (56%), Gaps = 4/216 (1%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I+Q++ +GV  + +++L     G V+  QG   L  F AE     L+S+  LRE+G ++T
Sbjct: 44  IKQLHVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVSLSLLRELGPVVT 103

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA II++P+L ++   
Sbjct: 104 ALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGIIAMPILAVIFTA 163

Query: 277 SAIIGASI--VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
             I G S+  V WK  D+    F+S   ST T+ ++  G IK+   A A+  +A+  G+ 
Sbjct: 164 IGIWGGSLVGVDWKGVDV--GSFWSVMQSTVTMGDLLNGFIKSIVFAFAVVWIALFNGYD 221

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV +  +++ +D +     F 
Sbjct: 222 ALPTSEGISQATTRTVVHASLVILGLDFILTAIMFG 257


>gi|315635512|ref|ZP_07890778.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Arcobacter butzleri JV22]
 gi|315480270|gb|EFU70937.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Arcobacter butzleri JV22]
          Length = 285

 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 60/135 (44%), Positives = 85/135 (62%), Gaps = 4/135 (2%)

Query: 142 FCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSID 201
           F  S  +FK     +++ +       + +V + SF+ G VIA QG+ QL +FGA IF ++
Sbjct: 143 FNPSKIRFKA----MLKYIETSAFDALLIVAVTSFLVGVVIAYQGSVQLEKFGANIFIVE 198

Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261
           ++SI   REI  L+TA++IAGRS S+  AEIG+MKI EEIDA++TM  +    L  PRI+
Sbjct: 199 MISITMFREIAPLVTAIVIAGRSASSYTAEIGAMKITEEIDAMKTMNFEPTLFLTLPRIF 258

Query: 262 ALIISLPLLTILANF 276
           AL ISLPLL     +
Sbjct: 259 ALCISLPLLVFFCRY 273


>gi|238650558|ref|YP_002916410.1| ABC transporter permease protein [Rickettsia peacockii str. Rustic]
 gi|238624656|gb|ACR47362.1| ABC transporter permease protein [Rickettsia peacockii str. Rustic]
          Length = 259

 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 140/266 (52%), Gaps = 13/266 (4%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKG--FLLSLIRQMYYVGVS 166
           N+   +GK+ VKF     S +            F A S   +   +L  +IRQ+ ++G  
Sbjct: 4   NIANSVGKRTVKFAQSVGSFSLF---------SFAAVSSIIRPPLYLSLIIRQLLFIGFH 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTAVMIAGRSG 225
            +PVV + +F +GAV+A Q     S+F AE  SI  + +L L RE+G +L  +M+AGR G
Sbjct: 55  SLPVVAMTTFFSGAVLALQSYIGFSRFSAES-SIATVVVLSLTRELGPVLAGLMVAGRVG 113

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           ++I AEI +M++ E++DA+ T+  D ++ L+ PR+   II++P L ++ +   ++G  +V
Sbjct: 114 ASIAAEIATMRVTEQVDALYTLSTDPIKYLVFPRVITAIITMPCLVLIGDIIGVMGGYLV 173

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                D   A + +         ++ +GL+KA      I I++   G+  G  +  +G+ 
Sbjct: 174 GVYKLDFNSAAYLTSTFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRA 233

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAI 371
            T+ VV +  +++I + L    +F +
Sbjct: 234 TTSAVVNASILILISNYLITELFFKV 259


>gi|302185305|ref|ZP_07261978.1| putative ABC transport system permease protein [Pseudomonas
           syringae pv. syringae 642]
          Length = 265

 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 126/216 (58%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y VGV  + ++++     G V+A QG   L+++G+E     ++++  LRE+G ++
Sbjct: 48  LVRQLYSVGVMSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVV 107

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  ISLP+L ++ +
Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFS 167

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFA 334
              I GAS V   +  +    F+S   ++ +  N +  G+IK+   A  +  +A+ +G+ 
Sbjct: 168 VVGIWGASWVAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYD 227

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV +   V+ +D +     F 
Sbjct: 228 CDPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 263


>gi|78357340|ref|YP_388789.1| hypothetical protein Dde_2297 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78219745|gb|ABB39094.1| Protein of unknown function DUF140 [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
          Length = 270

 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 123/217 (56%), Gaps = 5/217 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +++Q+Y++G   + V+ LI   TG V+  QG + L +FG+E      +++  +RE+G +L
Sbjct: 52  VVQQVYFIGSKSLFVIALIGIFTGMVLGLQGYYTLVKFGSEGLLGAAVALTLIRELGPVL 111

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA+M+ GR+GSA+ AEIG M+I+++IDA+  M +  +  L++PR+ A +I  P+LT L N
Sbjct: 112 TAIMVTGRAGSAMAAEIGVMRISDQIDALEVMDVPPMGYLVTPRLLASLIVFPMLTALFN 171

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              IIG  +       I   V+F R  S+   +++  G +K    A  + I++  +G+  
Sbjct: 172 TIGIIGGYLTGVVLLGINSGVYFYRIDSSVGWSDVSGGFLKTMVFAVIVSIISCYQGYFT 231

Query: 336 GVHSNSLGKK-----VTTCVVQSISIVIIIDSLFAIF 367
            +  + +G +      T+ VV S  +V++ D +   F
Sbjct: 232 HMRKDGMGPEGVSNSTTSAVVMSCVLVLVSDYVLTSF 268


>gi|330446812|ref|ZP_08310463.1| mlaE [Photobacterium leiognathi subsp. mandapamensis svers.1.1.]
 gi|328491003|dbj|GAA04960.1| mlaE [Photobacterium leiognathi subsp. mandapamensis svers.1.1.]
          Length = 260

 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 127/232 (54%), Gaps = 2/232 (0%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G   +     K F L L++Q+Y VGV  + ++++     G V++ QG   L+ FGAE   
Sbjct: 29  GALVSKPQPVKMFPL-LMKQLYSVGVLSMAIILVSGLFIGMVLSLQGYIVLADFGAETSL 87

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
             ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR
Sbjct: 88  GQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVIAPR 147

Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAP 318
            WA +IS+PLL ++ +   + GA IV   +  I +  F+S   S+   + +I   +IKA 
Sbjct: 148 FWAGVISMPLLALMFSVVGLWGAQIVGVDWKGIDYGSFWSVMQSSVNFSYDIGNSIIKAV 207

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             A  +  +A+  G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 208 VFAITVTWIAVFNGYDAVPTSEGISRATTRTVVNSSLAVLGLDFILTALMFG 259


>gi|126663828|ref|ZP_01734823.1| ABC transporter, permease [Flavobacteria bacterium BAL38]
 gi|126624092|gb|EAZ94785.1| ABC transporter, permease [Flavobacteria bacterium BAL38]
          Length = 261

 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 120/221 (54%), Gaps = 4/221 (1%)

Query: 141 EFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSI 200
           EF    Y+FK FL    RQ Y++G   + +V +  F+ G V   Q    L +FGA  +  
Sbjct: 32  EFWKPPYEFKEFL----RQCYFIGNRSLFLVGVTGFIIGLVFTLQSRPTLQEFGAVSWMA 87

Query: 201 DLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRI 260
            ++S+  +REIG ++TA++ AGR GS I AE+GSMK+ E+IDA+   G +  + L+  RI
Sbjct: 88  SMVSVSIIREIGPIITALICAGRIGSGIGAELGSMKVTEQIDAMEVSGTNPFKYLVITRI 147

Query: 261 WALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320
            A  + LPLL I  +  AI G+ +V     ++ F ++F++  +    +++    +K  F 
Sbjct: 148 LATSLMLPLLVIFGDVLAIYGSYLVENVKDNVSFQLYFNQVFNILEFSDLIPATLKTFFF 207

Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
             AIG++   +G+     +  +GK     VV +  ++ +ID
Sbjct: 208 GFAIGLIGCYKGYYCKKGTAGVGKAANEAVVYTSMLLFVID 248


>gi|330950264|gb|EGH50524.1| hypothetical protein PSYCIT7_02422 [Pseudomonas syringae Cit 7]
          Length = 265

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 126/216 (58%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y VGV  + ++++     G V+A QG   L+++G+E     ++++  LRE+G ++
Sbjct: 48  LVRQLYSVGVMSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVV 107

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  ISLP+L ++ +
Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFS 167

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFA 334
              I GAS V   +  +    F+S   ++ +  N +  G+IK+   A  +  +A+ +G+ 
Sbjct: 168 VVGIWGASWVAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYD 227

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV +   V+ +D +     F 
Sbjct: 228 CEPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 263


>gi|283779915|ref|YP_003370670.1| hypothetical protein Psta_2136 [Pirellula staleyi DSM 6068]
 gi|283438368|gb|ADB16810.1| protein of unknown function DUF140 [Pirellula staleyi DSM 6068]
          Length = 289

 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 121/223 (54%), Gaps = 13/223 (5%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           +L+   Y VGV  +PV+ L     G V+A Q  F     G E     ++++  +RE+G +
Sbjct: 61  TLLPNFYQVGVLSLPVIALTGTFIGMVLAVQSYFTFRDLGLETRMGAVINMTLVRELGPV 120

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           L A M+AGR G A+ AE+G+M++ E+IDA+ +MG D +  L+ PR  A +  +P LTI+A
Sbjct: 121 LAATMLAGRVGCAMAAELGTMRVTEQIDALESMGADPIYYLVVPRFLACLFLIPTLTIMA 180

Query: 275 NFSAIIGASIVIWKYYDIPFAV--FFSRFHSTATLAN--IFTGLIKAPFMACAIGIVAMK 330
           +F  ++G     + Y  +  ++      ++S   + N  +F+G++K+ F   AI +V+  
Sbjct: 181 DFMGVVGG----YFYSTVVLSIDKHHYWYNSEQFVGNFDLFSGILKSLFFGAAIAVVSCY 236

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIID-----SLFAIFY 368
            GF     +  +G+  T   V S  ++++ID      L+ ++Y
Sbjct: 237 RGFHCTPGAEGVGRAATAAFVHSFVLILVIDLFLGKMLYTLYY 279


>gi|83309431|ref|YP_419695.1| ABC-type transport system [Magnetospirillum magneticum AMB-1]
 gi|82944272|dbj|BAE49136.1| ABC-type transport system [Magnetospirillum magneticum AMB-1]
          Length = 271

 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 117/212 (55%)

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           L  ++ Q   +G+  +P+V ++S   G ++A QG + L  FGAE      +++  +RE G
Sbjct: 54  LAPVVAQAMEIGIGALPIVTVLSATIGIMLAIQGIYTLRLFGAESRVSLGVAMSVVREFG 113

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            L+T +++AGRSGSA+ A +G+M+IN+EIDA+  MG+  VR L+ P + A++  LP LT+
Sbjct: 114 PLITGILVAGRSGSALAARLGTMRINQEIDALTVMGVSPVRFLVVPPLLAMMAMLPALTL 173

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
            ++   +  A + I          +         L +I+ GL K+   +  I +V +  G
Sbjct: 174 WSDLVGLFAAGLYIAPQLGSSMGAYVDEMTDLVRLNDIWHGLGKSAIFSVLITVVGVVNG 233

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            +V   +  +G+  T  VV +IS ++I D +F
Sbjct: 234 ASVTGGAEGVGRMTTRSVVHAISAIVITDMIF 265


>gi|91206155|ref|YP_538510.1| ABC transporter permease protein [Rickettsia bellii RML369-C]
 gi|157826543|ref|YP_001495607.1| ABC transporter permease protein [Rickettsia bellii OSU 85-389]
 gi|122425169|sp|Q1RGU3|Y1340_RICBR RecName: Full=Probable ABC transporter permease protein RBE_1340
 gi|91069699|gb|ABE05421.1| ABC transporter permease protein [Rickettsia bellii RML369-C]
 gi|157801847|gb|ABV78570.1| ABC transporter permease protein [Rickettsia bellii OSU 85-389]
          Length = 259

 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 125/217 (57%), Gaps = 2/217 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           +I+Q+ ++G   +PVV + +F +GAV+A Q     S+F AE  SI  + +L L RE+G +
Sbjct: 44  IIKQLLFIGFYSLPVVAMTTFFSGAVLALQSYTGFSRFSAE-SSIATVVVLSLTRELGPV 102

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           L  +M+AGR G++I AEIG+M++ E++DA+ T+  D ++ L+ P++ A II++P L ++ 
Sbjct: 103 LAGLMVAGRVGASIAAEIGTMRVTEQVDALYTLSTDSIKYLVFPKVIAAIITMPCLVLIG 162

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
           +   ++G  +V     D   + + +         ++ +GL+KA      I I++   G+ 
Sbjct: 163 DVIGVMGGYLVGVYKLDFNSSTYLTSTFQYLEPIDVISGLVKAGVFGFIISIISCYSGYY 222

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
            G  +  +G+  T+ VV S  +++I + L    +F +
Sbjct: 223 SGKGAKGVGRATTSAVVNSSILILISNYLITELFFKV 259


>gi|66047367|ref|YP_237208.1| hypothetical protein Psyr_4140 [Pseudomonas syringae pv. syringae
           B728a]
 gi|289676091|ref|ZP_06496981.1| putative ABC transport system permease protein [Pseudomonas
           syringae pv. syringae FF5]
 gi|63258074|gb|AAY39170.1| Protein of unknown function DUF140 [Pseudomonas syringae pv.
           syringae B728a]
 gi|330895265|gb|EGH27603.1| hypothetical protein PSYJA_00595 [Pseudomonas syringae pv. japonica
           str. M301072PT]
 gi|330937995|gb|EGH41776.1| hypothetical protein PSYPI_04838 [Pseudomonas syringae pv. pisi
           str. 1704B]
 gi|330969694|gb|EGH69760.1| hypothetical protein PSYAR_04288 [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 265

 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 126/216 (58%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y VGV  + ++++     G V+A QG   L+++G+E     ++++  LRE+G ++
Sbjct: 48  LVRQLYSVGVMSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVV 107

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  ISLP+L ++ +
Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFS 167

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFA 334
              I GAS V   +  +    F+S   ++ +  N +  G+IK+   A  +  +A+ +G+ 
Sbjct: 168 VVGIWGASWVAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYD 227

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV +   V+ +D +     F 
Sbjct: 228 CEPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 263


>gi|88861156|ref|ZP_01135790.1| putative transport protein (ABC superfamily, membrane)
           [Pseudoalteromonas tunicata D2]
 gi|88816878|gb|EAR26699.1| putative transport protein (ABC superfamily, membrane)
           [Pseudoalteromonas tunicata D2]
          Length = 259

 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 117/199 (58%), Gaps = 1/199 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q+Y VG   + ++++     G V+A QG   L  +GAE     L+++  LRE+G ++
Sbjct: 43  LIKQLYMVGFLSLMIIVVSGLFIGMVLALQGYTVLVDYGAEDSLGPLVALSLLRELGPVV 102

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D ++ +I+PR WA IIS+PLL ++ +
Sbjct: 103 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAIDPLKRIIAPRFWAGIISMPLLALIFS 162

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
             AI+GA +V   +  I    F+S   +  +   +I  G+IK+   A  +  +A+ +G+ 
Sbjct: 163 AVAILGAHLVGVDWLGIDSGSFWSVMQAQVSFEKDILNGMIKSLVFAFVVTWIALYKGYF 222

Query: 335 VGVHSNSLGKKVTTCVVQS 353
               S  + K  T  VVQS
Sbjct: 223 CIPTSEGISKATTETVVQS 241


>gi|23016441|ref|ZP_00056197.1| COG0767: ABC-type transport system involved in resistance to
           organic solvents, permease component [Magnetospirillum
           magnetotacticum MS-1]
          Length = 271

 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 118/212 (55%)

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           L  ++ Q   +G+  +P+V ++S   G ++A QG + L  FGAE      +++  +RE G
Sbjct: 54  LAPVVAQAMEIGIGALPIVTVLSATIGIMLAIQGIYTLRLFGAESRVSLGVAMSVVREFG 113

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            L+T +++AGRSGSA+ A +G+M+IN+EIDA+  MG+  VR L+ P + A+++ LP LT+
Sbjct: 114 PLITGILVAGRSGSALAARLGTMRINQEIDALTVMGVSPVRFLVVPPLLAMMVMLPALTL 173

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
            ++   +  A + I          +         L +++ GL K+   +  I +V +  G
Sbjct: 174 WSDLVGLFAAGLYIAPQLGSSMGAYVDEMTDLVRLNDVWHGLGKSAIFSVLITLVGVVNG 233

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            +V   +  +G+  T  VV +IS +++ D +F
Sbjct: 234 ASVTGGAEGVGRLTTRSVVHAISAIVVTDMIF 265


>gi|317484538|ref|ZP_07943446.1| hypothetical protein HMPREF0179_00797 [Bilophila wadsworthia 3_1_6]
 gi|316924199|gb|EFV45377.1| hypothetical protein HMPREF0179_00797 [Bilophila wadsworthia 3_1_6]
          Length = 388

 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 114/204 (55%)

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           GV  +P+V LIS + G ++A  G  QL  FGAEI+   L+++   R +G ++T +++AGR
Sbjct: 179 GVDALPIVSLISLLVGLILAFVGVIQLKMFGAEIYVSSLVAVSMTRIMGAIMTGIILAGR 238

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           +G++  A IG+M++NEEIDA+ T+G+     LI PR+ AL    PLL + ++F  I+G  
Sbjct: 239 TGASYAAVIGTMQVNEEIDALTTLGVAPSDYLIMPRVLALTAMTPLLVLYSDFMGIMGGF 298

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           IV      +    +++       + N++ G++        I I    +G   G ++ ++G
Sbjct: 299 IVGVGILGLDPMEYYTFTQKGFNINNLWVGMVHGAVYGMLIAITGCYQGLRCGRNAEAVG 358

Query: 344 KKVTTCVVQSISIVIIIDSLFAIF 367
           K  T+ VV SI  +++  ++  I 
Sbjct: 359 KATTSAVVYSIVGIVLSTAVLTIL 382


>gi|294788757|ref|ZP_06753998.1| putative membrane protein [Simonsiella muelleri ATCC 29453]
 gi|294483239|gb|EFG30925.1| putative membrane protein [Simonsiella muelleri ATCC 29453]
          Length = 258

 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 123/217 (56%), Gaps = 3/217 (1%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVL 214
           +IRQMY+ GV  + ++ +     G V+  QG  QL++F  A++    + + L LRE+G +
Sbjct: 42  MIRQMYFSGVLSILIIAVSGLFVGMVLGLQGYTQLAKFKAADVLGFMVAAAL-LRELGPV 100

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           L A++ A  SG A+ +EIG MK  E+++A+  M ++ V  +++PR WA ++S+PLL  + 
Sbjct: 101 LAAILFASSSGGAMTSEIGLMKTTEQLEAMNVMAINPVARVVAPRFWAGVVSMPLLASIF 160

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGF 333
           N + I G  +V  ++  +   VF+S   ++ T + ++  GLIK+     A+ ++A+ +GF
Sbjct: 161 NVAGIWGGYLVGVQWLGLDSGVFWSHMQNSMTFSYDVLNGLIKSMIFGTAVSLIAVYQGF 220

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                +  + +  T  VV S   V+ +D +   F FA
Sbjct: 221 HCRPTAEGILRASTRTVVSSALTVLALDFILTAFMFA 257


>gi|239947145|ref|ZP_04698898.1| membrane protein [Rickettsia endosymbiont of Ixodes scapularis]
 gi|239921421|gb|EER21445.1| membrane protein [Rickettsia endosymbiont of Ixodes scapularis]
          Length = 261

 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 142/266 (53%), Gaps = 9/266 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N+   +GK+ +KF     S +  +   +S       S  +   +L  +IRQ+ ++G   +
Sbjct: 4   NIANSVGKRTIKFAQSVGSFSLFIFAAVS-------SIIRPPLYLSLIIRQLLFIGFHSL 56

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTAVMIAGRSGSA 227
            VV + +F +GAV+A Q     S+F AE  SI  + IL L RE+G +L  +M+AGR G++
Sbjct: 57  SVVAMTTFFSGAVLALQSYTGFSRFSAE-SSIATVVILSLTRELGPVLAGLMVAGRVGAS 115

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I AEI +M++ E++DA+ T+  D ++ L+ PR+ A II++P L ++ +   ++G  +V  
Sbjct: 116 IAAEIATMRVTEQVDALYTLSTDPIKYLVFPRVIAAIITMPCLVLIGDIIGVMGGYLVGV 175

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
              D   A + +         ++ +GL+KA      I I++   G+  G  +  +G+  T
Sbjct: 176 YKLDFNSAAYLTSTFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRATT 235

Query: 348 TCVVQSISIVIIIDSLFAIFYFAIGI 373
           + VV S  +++I + L    +F + I
Sbjct: 236 SAVVNSSILILISNYLITELFFKVQI 261


>gi|313891881|ref|ZP_07825486.1| conserved hypothetical protein [Dialister microaerophilus UPII
           345-E]
 gi|313119875|gb|EFR43062.1| conserved hypothetical protein [Dialister microaerophilus UPII
           345-E]
          Length = 253

 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 116/212 (54%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q   +GV+  P+V L    TG V + Q   +L ++GAE  +  +++I   RE+G +L  
Sbjct: 42  KQCLLLGVNSFPIVFLTLLFTGMVFSAQIVGELVKYGAEFTAGSIVAIGLGRELGPVLCG 101

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           V++AGR G+AI AE+G+M++ E+IDA+R M +D V  L+ PR+ A +I LP+L + A  +
Sbjct: 102 VVLAGRVGAAITAELGTMRVTEQIDALRCMAVDPVEYLVLPRVIACMIMLPILDVFAVTT 161

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            + G  IV     +I   +++    S    ++++ G+IK  F    I +     G     
Sbjct: 162 GVGGGMIVASVTGNISSHMYWDSITSFCVASDLYIGMIKTVFFGMIIALTGCDRGLTCET 221

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
            +  +GK  T  VV S+ ++ I++ + +   F
Sbjct: 222 GAEGVGKATTQSVVYSMIMIFIVNYILSTILF 253


>gi|238899004|ref|YP_002924686.1| putative ABC transporter, permease protein [Candidatus Hamiltonella
           defensa 5AT (Acyrthosiphon pisum)]
 gi|229466764|gb|ACQ68538.1| putative ABC transporter, permease protein [Candidatus Hamiltonella
           defensa 5AT (Acyrthosiphon pisum)]
          Length = 261

 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 120/218 (55%), Gaps = 6/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           LI+Q+Y VGV  + ++++     G V+  QG   L+ +GAE  S+ ++  L L RE+G +
Sbjct: 45  LIKQLYRVGVQSILIIVISGLFIGMVLGLQGYLTLTTYGAE-GSLGMLVALSLFRELGPV 103

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           ++A++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +ISLPLL  L 
Sbjct: 104 VSALLFAGRAGSALTAEIGLMKATEQLSSLEMMAIDPLRRVIAPRFWAGVISLPLLAALF 163

Query: 275 NFSAIIGASIVI--WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
               I G+S+V   WK  D  F  F+S  H +   +++     K+   A  I  +++  G
Sbjct: 164 ISVGIFGSSMVAIDWKGIDAGF--FWSAMHDSVMPSDVINCFFKSVSFAVIITWISVFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  +    T  VV S   V+ +D L  +  F 
Sbjct: 222 YDATPTSEGISLATTRTVVNSSLAVLAVDFLLTVLMFG 259


>gi|297537487|ref|YP_003673256.1| hypothetical protein M301_0292 [Methylotenera sp. 301]
 gi|297256834|gb|ADI28679.1| protein of unknown function DUF140 [Methylotenera sp. 301]
          Length = 268

 Score =  112 bits (281), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 141/259 (54%), Gaps = 8/259 (3%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           IG ++V+ I    + A +  L I  +GE       FK F L++ R++Y  GV  + ++I+
Sbjct: 17  IGHRMVERIWRLGAGARLFFLTIVYSGE------SFKRFHLTM-REIYSTGVMSLLIIIV 69

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
            +F  G V+A QG   L ++G+      L+S+  +RE+G ++TA++ AGR+G+AI AEIG
Sbjct: 70  SAFFVGMVLALQGYNTLQKYGSSEAIGVLVSLSLVRELGPVVTALLFAGRAGTAITAEIG 129

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
            MK  E++ A+  M ++ +  +++PR WA +IS+P+L  L +   I+G  IV      + 
Sbjct: 130 LMKTTEQLSAMEMMAVNPIARVVAPRFWAGVISMPILATLFSMVGILGGYIVAVPLIGVD 189

Query: 294 FAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
              F+S+  ++    ++I  G+IK+     A  ++A+ EGF     +  + +  T  VV 
Sbjct: 190 EGAFWSQMQASVDFQSDIVNGIIKSLVFGVACTMIALFEGFDAPPTAEGVSRATTRTVVI 249

Query: 353 SISIVIIIDSLFAIFYFAI 371
           S   V+ +D +   F   I
Sbjct: 250 SSLTVLGLDFVLTSFMLVI 268


>gi|298488498|ref|ZP_07006528.1| permease component of an ABC superfamily transporter [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298156839|gb|EFH97929.1| permease component of an ABC superfamily transporter [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
          Length = 265

 Score =  112 bits (281), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 126/216 (58%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y VGV  + ++++     G V+A QG   L+++G+E     ++++  LRE+G ++
Sbjct: 48  LVRQLYSVGVMSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVV 107

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  IS+P+L ++ +
Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFS 167

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFA 334
              I GAS V   +  +    F+S   ++ +  N +  G+IK+   A  +  +A+ +G+ 
Sbjct: 168 VVGIWGASWVAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYD 227

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV +   V+ +D +     F 
Sbjct: 228 CDPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 263


>gi|86159557|ref|YP_466342.1| hypothetical protein Adeh_3136 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85776068|gb|ABC82905.1| protein of unknown function DUF140 [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 386

 Score =  112 bits (280), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 110/211 (52%)

Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221
           + G   +P+V L+SF+ G ++A  G  QL  FGAE F  D++ I  +R++  L+T V +A
Sbjct: 175 HSGAEALPIVALVSFLVGIILAFVGITQLRFFGAEAFVADIVGIAIVRDMAALITGVTLA 234

Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281
           GRSG A  A++ +M + +EIDA+RT+G+  V  L+ PR+ AL   +PLLT+ A+ S I+G
Sbjct: 235 GRSGGAFAAQLATMNVTQEIDALRTLGISPVEYLVVPRVLALTAMMPLLTLFADASGILG 294

Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341
            ++V       P A +  +        ++  GL+K       I +     G      +  
Sbjct: 295 GAMVGTTMLHQPLAGYLHQTALALVPGDLAGGLVKGATYGLLIALTGAFRGMQAERSAER 354

Query: 342 LGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           +G+  T  VV  I  +I    ++   +F  G
Sbjct: 355 VGEAATQAVVTGIVAIISACGVYQYVFFLFG 385


>gi|157964160|ref|YP_001498984.1| ABC transporter permease protein [Rickettsia massiliae MTU5]
 gi|157843936|gb|ABV84437.1| ABC transporter permease protein [Rickettsia massiliae MTU5]
          Length = 264

 Score =  112 bits (280), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 139/266 (52%), Gaps = 13/266 (4%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKG--FLLSLIRQMYYVGVS 166
           N+   +GK+ +KF     S +            F A S   +   +L  +IRQ+  +G  
Sbjct: 9   NIANSVGKRTIKFAQSVGSFSLF---------SFAAVSSIIRPPLYLSLIIRQLLLIGFH 59

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTAVMIAGRSG 225
            +PVV + +F +GAV+A Q     S+F AE  SI  + +L L RE+G +L  +M+AGR G
Sbjct: 60  SLPVVAMTTFFSGAVLALQSYTGFSRFSAE-SSIATVVVLSLTRELGPVLAGLMVAGRVG 118

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           ++I AEI +M++ E++DA+ T+  D ++ L+ PR+   II++P L ++ +   ++G  +V
Sbjct: 119 ASIAAEIATMRVTEQVDALYTLSTDPIKYLVFPRVITAIITMPCLVLIGDIIGVMGGYLV 178

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                D   A + +         ++ +GL+KA      I I++   G+  G  +  +G+ 
Sbjct: 179 GVYKLDFNSAAYLTSTFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRA 238

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAI 371
            T+ VV S  +++I + L    +F +
Sbjct: 239 TTSAVVNSSILILISNYLITELFFKV 264


>gi|71736723|ref|YP_276266.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|257483485|ref|ZP_05637526.1| toluene tolerance proteinTtg2B, putative [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|289627577|ref|ZP_06460531.1| putative ABC transport system permease protein [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289647003|ref|ZP_06478346.1| putative ABC transport system permease protein [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|71557276|gb|AAZ36487.1| toluene tolerance proteinTtg2B, putative [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|330869989|gb|EGH04698.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. aesculi
           str. 0893_23]
 gi|330987098|gb|EGH85201.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 265

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 126/216 (58%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y VGV  + ++++     G V+A QG   L+++G+E     ++++  LRE+G ++
Sbjct: 48  LVRQLYSVGVMSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVV 107

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  IS+P+L ++ +
Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFS 167

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFA 334
              I GAS V   +  +    F+S   ++ +  N +  G+IK+   A  +  +A+ +G+ 
Sbjct: 168 VVGIWGASWVAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYD 227

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV +   V+ +D +     F 
Sbjct: 228 CEPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 263


>gi|113476613|ref|YP_722674.1| hypothetical protein Tery_3053 [Trichodesmium erythraeum IMS101]
 gi|110167661|gb|ABG52201.1| protein of unknown function DUF140 [Trichodesmium erythraeum
           IMS101]
          Length = 249

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/198 (35%), Positives = 108/198 (54%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I QM  VG   + +V+L +   G V   Q A +L  FG       ++++   RE+G +LT
Sbjct: 26  IEQMAIVGPESLLIVLLTASFVGMVFTIQVARELVAFGTANMVGGMLALTLSRELGPVLT 85

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV++AGR GSA  AEIG+MK+ E+IDA+  +  D V  L+ PR+ A  + +P+LT+L   
Sbjct: 86  AVVVAGRVGSAFAAEIGTMKVTEQIDALYILKTDPVDYLVIPRVIACGVMMPILTLLCLV 145

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           +AI G  I+    YDIP +++     S  TL ++ +GL K+      I ++    G    
Sbjct: 146 AAIFGGLIIAVNLYDIPQSMYIDSVRSFLTLWDLCSGLTKSVVFGVLIAVIGTSWGLTTT 205

Query: 337 VHSNSLGKKVTTCVVQSI 354
             +  +GK  TT VV S+
Sbjct: 206 GGAKGVGKSTTTAVVTSL 223


>gi|297621446|ref|YP_003709583.1| putative permease component of ABC transporter [Waddlia
           chondrophila WSU 86-1044]
 gi|297376747|gb|ADI38577.1| putative permease component of ABC transporter [Waddlia
           chondrophila WSU 86-1044]
          Length = 274

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 118/212 (55%), Gaps = 1/212 (0%)

Query: 156 LIR-QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           LIR QMY +GV  +PVV +  F TG V+A Q  FQL+  G    +  +++   + E+G +
Sbjct: 46  LIRNQMYEIGVLSLPVVAITGFSTGMVLAAQSFFQLADKGLASATGLMVAKAMMVELGPV 105

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           LTA M+ GR G+++ AE+G+MK+ E+IDA+++M ++ +  LI+PR  A  + LPLLT+ +
Sbjct: 106 LTAFMVTGRVGASMCAELGTMKVTEQIDALKSMTVNPLGYLIAPRFIAGTLMLPLLTVFS 165

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
               I G  ++   +Y +P   F        T  + F+GL+KA      I  ++  +G  
Sbjct: 166 TVMGIGGGYMIAVWFYKMPSNTFLDPLPINITNFDFFSGLVKAISFGIVIVTISCYKGMT 225

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
               +  +G+  T  VV   S+++I + L  +
Sbjct: 226 TRGGAAGVGRATTNSVVICYSVILIGNFLLTV 257


>gi|320330045|gb|EFW86032.1| putative ABC transport system permease protein [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 265

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 126/216 (58%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y VGV  + ++++     G V+A QG   L+++G+E     ++++  LRE+G ++
Sbjct: 48  LVRQLYSVGVMSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVV 107

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  IS+P+L ++ +
Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFS 167

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFA 334
              I GAS V   +  +    F+S   ++ +  N +  G+IK+   A  +  +A+ +G+ 
Sbjct: 168 VVGIWGASWVAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYD 227

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV +   V+ +D +     F 
Sbjct: 228 CEPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 263


>gi|332038535|gb|EGI74978.1| uncharacterized ABC transporter, permease component YrbE
           [Pseudoalteromonas haloplanktis ANT/505]
          Length = 259

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 115/199 (57%), Gaps = 1/199 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y VG   + ++++     G V+A QG   L  +GAE     L+++  LRE+G ++
Sbjct: 43  LVRQLYMVGSQSLLIIMVSGLFIGMVLALQGYTVLVGYGAEDSLGPLVALSLLRELGPVV 102

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D ++ +I+PR WA  IS+PLL ++ +
Sbjct: 103 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAIDPLKRIIAPRFWAGFISMPLLALIFS 162

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334
             AIIGA +V   +  +    F+S   S  +   +I  G+IK+   A  +  +A+ +G+ 
Sbjct: 163 AVAIIGAHLVGVDWLGVDTGSFWSIMQSQVSFQQDILNGIIKSFVFAIVVTWIALYKGYD 222

Query: 335 VGVHSNSLGKKVTTCVVQS 353
               S  + K  T  VV S
Sbjct: 223 CVPTSEGISKATTETVVHS 241


>gi|331011542|gb|EGH91598.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 265

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 126/216 (58%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y VGV  + ++++     G V+A QG   L+++G+E     ++++  LRE+G ++
Sbjct: 48  LVRQLYSVGVMSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVV 107

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  IS+P+L ++ +
Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFS 167

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFA 334
              I GAS V   +  +    F+S   ++ +  N +  G+IK+   A  +  +A+ +G+ 
Sbjct: 168 VVGIWGASWVAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYD 227

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV +   V+ +D +     F 
Sbjct: 228 CEPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 263


>gi|330888613|gb|EGH21274.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. mori str.
           301020]
          Length = 230

 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 126/216 (58%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y VGV  + ++++     G V+A QG   L+++G+E     ++++  LRE+G ++
Sbjct: 13  LVRQLYSVGVMSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVV 72

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  IS+P+L ++ +
Sbjct: 73  TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFS 132

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFA 334
              + GAS V   +  +    F+S   ++ +  N +  G+IK+   A  +  +A+ +G+ 
Sbjct: 133 VVGVWGASWVAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYD 192

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV +   V+ +D +     F 
Sbjct: 193 CDPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 228


>gi|213966604|ref|ZP_03394755.1| membrane protein [Pseudomonas syringae pv. tomato T1]
 gi|301383114|ref|ZP_07231532.1| putative ABC transport system permease protein [Pseudomonas
           syringae pv. tomato Max13]
 gi|302058647|ref|ZP_07250188.1| putative ABC transport system permease protein [Pseudomonas
           syringae pv. tomato K40]
 gi|302133824|ref|ZP_07259814.1| putative ABC transport system permease protein [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|213928454|gb|EEB61998.1| membrane protein [Pseudomonas syringae pv. tomato T1]
 gi|330877179|gb|EGH11328.1| hypothetical protein PSYMP_16986 [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330964018|gb|EGH64278.1| hypothetical protein PSYAC_05120 [Pseudomonas syringae pv.
           actinidiae str. M302091]
 gi|331016694|gb|EGH96750.1| hypothetical protein PLA106_11700 [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 265

 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 126/216 (58%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y VGV  + ++++     G V+A QG   L+++G+E     ++++  LRE+G ++
Sbjct: 48  LVKQLYSVGVMSLVIIVVSGMFIGMVLALQGFSILAKYGSEQAVGQMVALTLLRELGPVV 107

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  ISLP+L ++ +
Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFS 167

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFA 334
              I GAS V   +  +    F+S   ++ +  N +  G+IK+   A  +  +A+ +G+ 
Sbjct: 168 VVGIWGASWVAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYD 227

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV +   V+ +D +     F 
Sbjct: 228 CDPTSEGISRATTKTVVYASLAVLGLDFILTALMFG 263


>gi|224369296|ref|YP_002603460.1| ABC-type transporter involved in resistance to organic solvents,
           permease protein [Desulfobacterium autotrophicum HRM2]
 gi|223692013|gb|ACN15296.1| ABC-type transporter involved in resistance to organic solvents,
           permease protein [Desulfobacterium autotrophicum HRM2]
          Length = 269

 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 116/212 (54%), Gaps = 6/212 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +I  ++++G+  + V+IL    TG V+  QG + L +FG+E      +++  +RE+G +L
Sbjct: 50  IIEHIWFIGMKSMMVIILTGIFTGMVLGLQGYYTLVRFGSEGMLGSAVALTLIRELGPVL 109

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA+M+  R+GSA+ AE+G M+I+++IDA+ TM ++ VR L +PRI A +IS PLLT L +
Sbjct: 110 TAIMVTARAGSAMAAELGVMRISQQIDALDTMDINPVRYLFTPRIIAAVISFPLLTALFD 169

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              I G  +       I   ++  R   +  + ++  G +K+   +  +  V    G+  
Sbjct: 170 VIGIFGGYLTGSLMLGINSGIYLFRVEESVLMTDVTGGFVKSLVFSLVVTTVCCSRGYFT 229

Query: 336 GVH-SNSLGKK-----VTTCVVQSISIVIIID 361
            +H     G K      TT VV S  +V++ D
Sbjct: 230 HLHRGGGFGAKGVSFSTTTAVVNSCVLVLVCD 261


>gi|297171834|gb|ADI22824.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [uncultured
           Oceanospirillales bacterium HF0500_29K23]
          Length = 260

 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 126/218 (57%), Gaps = 5/218 (2%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           +F+G    L+ Q++++GV    VV+L    TG V+  Q   Q  +   +   + ++++  
Sbjct: 34  RFRG--RDLVEQLHFIGVKSQSVVLLTGAFTGMVMCAQFYIQFHKVKMDSAVMSVVTVAM 91

Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267
            RE+G +LT++MIAGR G+A+ A++G+MK+ E+IDA+RT+    V  L++PR+ A++ISL
Sbjct: 92  ARELGAVLTSLMIAGRVGAAMAAQLGTMKVTEQIDALRTLATSPVDYLVAPRLLAMLISL 151

Query: 268 PLLTILA-NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326
           PLLT  A   S + G  + ++     P  ++ +    T ++ +I+ GLIKA   A  I  
Sbjct: 152 PLLTAEAIAISMVSGMLVAVYLLGLDPVFLWSNMVFYTGSV-DIWMGLIKAFIFAGIIAT 210

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           VA  +G   G  +  +GK  T  VV + SI I++ + F
Sbjct: 211 VACHKGMHCGQGAEGVGKATTEAVVAA-SISILVSNFF 247


>gi|197335795|ref|YP_002155152.1| toluene tolerance protein Ttg2B, putative [Vibrio fischeri MJ11]
 gi|197317285|gb|ACH66732.1| toluene tolerance protein Ttg2B, putative [Vibrio fischeri MJ11]
          Length = 264

 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/232 (34%), Positives = 124/232 (53%), Gaps = 2/232 (0%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G   A     K F L L++Q+Y VGV  + ++++     G VI+ QG   L  +GAE   
Sbjct: 33  GAIFAKPQPIKMFPL-LLKQLYSVGVLSLVIIVVSGLFIGMVISLQGYIILVDYGAETSL 91

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
             L+S+  LRE+G ++TA++ AGR+GSA+ AEIG MK  E+I ++  M +D +R +I+PR
Sbjct: 92  GQLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKTTEQISSMEMMAVDPLRQIIAPR 151

Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAP 318
           +WA IIS+P+L ++     I G  IV  ++  I +  F+S   S+  +  +I   LIK  
Sbjct: 152 LWAGIISMPILAVIFMAVGIWGGQIVGVEWKGIDYGSFWSVMQSSVDVRYDIVNSLIKCV 211

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             A  +  +A+  G+     S  +    T  VV S   V+ ID +     F 
Sbjct: 212 VFAFIVTWIALFNGYDATPTSEGISLATTRTVVHSSLAVLGIDFVLTALMFG 263


>gi|59711002|ref|YP_203778.1| toluene ABC transporter membrane protein [Vibrio fischeri ES114]
 gi|59479103|gb|AAW84890.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Vibrio fischeri ES114]
          Length = 264

 Score =  111 bits (278), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/232 (34%), Positives = 124/232 (53%), Gaps = 2/232 (0%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G   A     K F L L++Q+Y VGV  + ++++     G VI+ QG   L  +GAE   
Sbjct: 33  GAIFAKPQPIKMFPL-LLKQLYSVGVLSLVIIVVSGLFIGMVISLQGYIILVDYGAETSL 91

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
             L+S+  LRE+G ++TA++ AGR+GSA+ AEIG MK  E+I ++  M +D +R +I+PR
Sbjct: 92  GQLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKTTEQISSMEMMAVDPLRQIIAPR 151

Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAP 318
           +WA IIS+P+L ++     I G  IV  ++  I +  F+S   S+  +  +I   LIK  
Sbjct: 152 LWAGIISMPVLAVIFMAVGIWGGQIVGVEWKGIDYGSFWSVMQSSVDVRYDIINSLIKCV 211

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             A  +  +A+  G+     S  +    T  VV S   V+ ID +     F 
Sbjct: 212 VFAFIVTWIALFNGYDATPTSEGISLATTRTVVHSSLAVLGIDFVLTALMFG 263


>gi|170717850|ref|YP_001784909.1| hypothetical protein HSM_1589 [Haemophilus somnus 2336]
 gi|168825979|gb|ACA31350.1| protein of unknown function DUF140 [Haemophilus somnus 2336]
          Length = 261

 Score =  111 bits (278), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 120/218 (55%), Gaps = 1/218 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q+Y +GV  + +++L     G V+  QG   L  F AE     L+++  LRE+G ++
Sbjct: 43  LIKQLYVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVV 102

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +ISPR WA +IS+P+L ++  
Sbjct: 103 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVISPRFWAGVISMPILAVIFT 162

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G S+V   +  +    F+S   ++ +   ++  G IK+   A A+  +A+  G+ 
Sbjct: 163 AIGIWGGSLVGVDWKGVDAGSFWSVMQNSVSWGYDLLNGCIKSLCFAIAVVWIALFNGYD 222

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
               S  + K  T  VV +  +V+ +D +     F  G
Sbjct: 223 CIPTSEGISKATTKTVVHASLVVLGLDFVLTALMFGAG 260


>gi|242277698|ref|YP_002989827.1| hypothetical protein Desal_0221 [Desulfovibrio salexigens DSM 2638]
 gi|242120592|gb|ACS78288.1| protein of unknown function DUF140 [Desulfovibrio salexigens DSM
           2638]
          Length = 270

 Score =  111 bits (278), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 117/210 (55%), Gaps = 5/210 (2%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           ++++Y++GV  + V+ LI   TG V+  Q  + LS+FG+E F    +++  +RE+G +LT
Sbjct: 53  VKELYFIGVKSITVISLIGLFTGMVVGLQTQYALSKFGSEGFLGAAVALSLVRELGPVLT 112

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A+M+ GR+GS++ AEIG M+I+E+IDA+  M ++ +  L+SP++ A +IS P+LT   + 
Sbjct: 113 AIMLTGRAGSSMTAEIGVMRISEQIDALELMDINPINYLVSPKLVASLISFPILTAFFDL 172

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV- 335
             I+G  +           V++ R H+     +I  G  K+   A  +  V   +G+   
Sbjct: 173 IGIVGGYLSGVMLMGGNAGVYWHRVHTALGWDDISAGFNKSLVFAVLVCTVCCFQGYFTH 232

Query: 336 ----GVHSNSLGKKVTTCVVQSISIVIIID 361
               G     + +  TT VV S  +V++ D
Sbjct: 233 HRKDGKGPEGVSQATTTAVVMSCVLVLVAD 262


>gi|237798606|ref|ZP_04587067.1| hypothetical protein POR16_07195 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331021459|gb|EGI01516.1| hypothetical protein POR16_07195 [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 265

 Score =  111 bits (278), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 126/216 (58%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q+Y VGV  + ++++     G V+A QG   L+++G+E     ++++  LRE+G ++
Sbjct: 48  LIKQLYSVGVMSLVIIVVSGVFIGMVLALQGFSILAKYGSEQAVGQMVALTLLRELGPVV 107

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  ISLP+L ++ +
Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFS 167

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFA 334
              I GAS V   +  +    F+S   ++ +  N +  G+IK+   A  +  +A+ +G+ 
Sbjct: 168 VVGIWGASWVAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYD 227

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV +   V+ +D +     F 
Sbjct: 228 CDPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 263


>gi|157803278|ref|YP_001491827.1| ABC transporter permease protein [Rickettsia canadensis str.
           McKiel]
 gi|157784541|gb|ABV73042.1| ABC transporter permease protein [Rickettsia canadensis str.
           McKiel]
          Length = 259

 Score =  111 bits (278), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 127/226 (56%), Gaps = 20/226 (8%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           +IRQ+ ++G   +PVV + +F +GAV+A Q     S+F AE  SI  + +L L RE+G +
Sbjct: 44  IIRQLLFIGFYSLPVVTMTTFFSGAVLALQSYNGFSRFSAES-SIATVVVLSLTRELGPV 102

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           L  +M+AGR G++I AEI +M++ E++DA+ T+  D ++ L+ PR+   ++++P L ++ 
Sbjct: 103 LVGLMVAGRVGASIAAEIATMRVTEQVDALYTLSTDPIKYLVFPRVITAMLTMPCLVLIG 162

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF---------TGLIKAPFMACAIG 325
           +   ++G  +V          V+   F+STA L + F         +GL+KA      I 
Sbjct: 163 DVIGVMGGYLV---------GVYKLGFNSTAYLTSTFQYLEPIDVISGLVKAGVFGFIIS 213

Query: 326 IVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           I++   G+  G  +  +G+  T+ VV S  +++I + L    +F +
Sbjct: 214 IISCYSGYYSGKGAKGVGRATTSAVVNSSILILISNYLITELFFKV 259


>gi|170728557|ref|YP_001762583.1| hypothetical protein Swoo_4232 [Shewanella woodyi ATCC 51908]
 gi|169813904|gb|ACA88488.1| protein of unknown function DUF140 [Shewanella woodyi ATCC 51908]
          Length = 260

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/228 (33%), Positives = 123/228 (53%), Gaps = 2/228 (0%)

Query: 144 ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203
           A   + KGF L  ++Q+Y VGV  + ++ +     G V+A QG   L  FG E     ++
Sbjct: 33  ARKPRAKGFPL-FVKQLYVVGVQSMVLIFVSGLFIGMVLALQGYNILVGFGTEESLGPMV 91

Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263
           ++  LRE+G ++TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA 
Sbjct: 92  ALSLLRELGPVVTALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAG 151

Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMAC 322
           ++SLPLL ++     I G  IV  ++  I    F+S   ++     +I   LIK+   A 
Sbjct: 152 VVSLPLLALIFTAVGIYGGHIVGVEWKGIDSGSFWSILQASVEWRQDIVNCLIKSLVFAV 211

Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            +  +A+  G+ V  +   + K  T  VVQS   V+ +D L     F 
Sbjct: 212 VVTWIALYRGYQVIPNPEGISKATTQTVVQSSLAVLALDFLLTALMFG 259


>gi|46447386|ref|YP_008751.1| hypothetical protein pc1752 [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|46401027|emb|CAF24476.1| conserved hypothetical protein [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 240

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 117/207 (56%), Gaps = 1/207 (0%)

Query: 156 LIR-QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           LIR Q++ +GV  +PVV +  F TG V+A Q  FQLS  G    +  +++   L E+G +
Sbjct: 12  LIRDQLFDIGVMSLPVVAITGFSTGMVLAAQSFFQLSDKGLASATGLMVAKAMLVELGPV 71

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           LTA M+ GR G+A+ AE+G+M++ E+IDA+RTM ++ +  L++PR  A +I +PLLT+ +
Sbjct: 72  LTAFMVTGRVGAAMCAELGTMRVTEQIDAMRTMSVNPLGYLVAPRFLAGMIMMPLLTVFS 131

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
               I G  ++   +Y +P + F           +  +G++KA      I  ++  +G  
Sbjct: 132 AIMGIFGGYLIAVYFYKMPASSFIDPLPLHINTFDFISGMVKAFVFGIIIVTISCYKGMK 191

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIID 361
               +  +G+  T  VV   S+++II+
Sbjct: 192 TRGGAAGVGRSTTNSVVICYSVILIIN 218


>gi|330958007|gb|EGH58267.1| hypothetical protein PMA4326_05446 [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 265

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 126/216 (58%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y VGV  + ++++     G V+A QG   L+++G+E     ++++  LRE+G ++
Sbjct: 48  LVKQLYSVGVMSLVIIVVSGIFIGMVLALQGFSILAKYGSEQAVGQMVALTLLRELGPVV 107

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  ISLP+L ++ +
Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFS 167

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFA 334
              I GAS V   +  +    F+S   ++ +  N +  G+IK+   A  +  +A+ +G+ 
Sbjct: 168 VVGIWGASWVAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYD 227

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV +   V+ +D +     F 
Sbjct: 228 CDPTSEGISRATTKTVVYASLAVLGLDFILTALMFG 263


>gi|33151499|ref|NP_872852.1| permease [Haemophilus ducreyi 35000HP]
 gi|33147719|gb|AAP95241.1| probable permease [Haemophilus ducreyi 35000HP]
          Length = 259

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 117/215 (54%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q+Y +GV  + ++IL     G V+A QG   L  F AE     L+S+  LRE+G ++
Sbjct: 44  LIKQLYILGVQSLLIIILSGLFIGMVLALQGYVVLVDFAAESSLGTLISLSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEI  MK  E++ ++  M +D +R +I+PR WA +IS+P+L ++  
Sbjct: 104 TALLFAGRAGSALTAEIALMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPILAVIFT 163

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              I G S+V   +  +    F+S    +    ++  G IK+   A A+  +A+  G+  
Sbjct: 164 AIGIWGGSLVGVDWKGVDSGSFWSVMQHSVNGQDLINGFIKSIIFAIAVVWIALFNGYDS 223

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
              S  + +  T  VV +  IV+ +D +     F 
Sbjct: 224 TATSEGISQATTRTVVHASLIVLGLDFILTAMMFG 258


>gi|113461315|ref|YP_719384.1| ABC transporter permease [Haemophilus somnus 129PT]
 gi|112823358|gb|ABI25447.1| permease component, possible ABC transporter [Haemophilus somnus
           129PT]
          Length = 261

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 121/218 (55%), Gaps = 1/218 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q+Y +GV  + +++L     G V+  QG   L  F AE     L+++  LRE+G ++
Sbjct: 43  LIKQLYVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVV 102

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +ISPR WA +IS+P+L ++  
Sbjct: 103 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVISPRFWAGVISMPILAVIFT 162

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G S++   +  +    F+S   ++ + + ++  G IK+   A A+  +A+  G+ 
Sbjct: 163 AIGIWGGSLIGVDWKGVDAGSFWSVMQNSVSWSYDLLNGFIKSLCFAIAVVWIALFNGYD 222

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
               S  + K  T  VV +  +V+ +D +     F  G
Sbjct: 223 CIPTSEGISKATTKTVVHASLVVLGLDFVLTALMFGAG 260


>gi|261868147|ref|YP_003256069.1| ABC transporter permease [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413479|gb|ACX82850.1| conserved ABC-type transport system protein, permease component
           [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 261

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 120/207 (57%), Gaps = 1/207 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q++ +GV  + +++L     G V+  QG   L  F AE     L+++  LRE+G ++
Sbjct: 44  LIKQLHVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +I++P+L+I+  
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPILSIIFI 163

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G S+V   +  +    F+S   S+ T + +I  G IK+ F A A+  +A+  G+ 
Sbjct: 164 AIGIWGGSLVGVDWKGVDSGSFWSVMQSSVTWSHDILNGFIKSLFFAIAVVWIALFNGYD 223

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIID 361
               S  + K  T  VV +  +++ +D
Sbjct: 224 CIPTSEGISKATTRTVVHASLVILGLD 250


>gi|325273317|ref|ZP_08139589.1| hypothetical protein G1E_09861 [Pseudomonas sp. TJI-51]
 gi|324101550|gb|EGB99124.1| hypothetical protein G1E_09861 [Pseudomonas sp. TJI-51]
          Length = 265

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 124/216 (57%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LIRQ+Y VGV  + +V++     G V+A QG   L+++G+E     ++++  LRE+G ++
Sbjct: 48  LIRQLYSVGVLSLAIVVVSGVFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVV 107

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  ISLPLL ++ +
Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFS 167

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G S V   +  +    F++   ++ +   ++  GLIK+   A     +A+ +G+ 
Sbjct: 168 VVGIWGGSWVAVDWLGVYEGSFWANMQNSVSFTDDVLNGLIKSLVFAFVATWIAVFQGYD 227

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV +   V+ +D +     F 
Sbjct: 228 CEPTSEGISRATTKTVVYASLAVLGLDFILTALMFG 263


>gi|255020159|ref|ZP_05292228.1| hypothetical protein ACA_0896 [Acidithiobacillus caldus ATCC 51756]
 gi|254970301|gb|EET27794.1| hypothetical protein ACA_0896 [Acidithiobacillus caldus ATCC 51756]
          Length = 260

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 119/215 (55%), Gaps = 1/215 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +RQ+Y  GV  + ++++ +F TG V+  QG + L +FGA      L+++  LRE+G +LT
Sbjct: 46  LRQVYGFGVLSLALMVVAAFFTGMVLGFQGYYALVRFGATSALGTLVALSLLRELGPVLT 105

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+GSA+ AEI +MK  E++ A+  M +D +  ++SPR+WA + ++P+L ++ + 
Sbjct: 106 ALLFAGRAGSALTAEIATMKATEQLSAMEMMAVDPLAWVVSPRLWAAVFTVPILCVIFDL 165

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             I G  ++      +    F+S+  S  +   +I  GL KA      +  +A  +G++ 
Sbjct: 166 VGIFGGYLIAVPVLGVDSGTFWSQMQSNVSFRGDILNGLFKALCFGLVVAWIAAWQGYSA 225

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
              +  +G   T  VV +   V+ +D +     F+
Sbjct: 226 KPTAEGVGNATTRSVVAASLAVLGLDFILTALLFS 260


>gi|256828811|ref|YP_003157539.1| protein of unknown function DUF140 [Desulfomicrobium baculatum DSM
           4028]
 gi|256577987|gb|ACU89123.1| protein of unknown function DUF140 [Desulfomicrobium baculatum DSM
           4028]
          Length = 263

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 126/213 (59%), Gaps = 10/213 (4%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           ++  +Y++G   + ++IL++F TG V+  QG + L +F AE      +++  +RE+G +L
Sbjct: 46  ILYDIYFIGFKSLNIIILVAFFTGMVLGLQGYYTLIKFSAEGMLGVAVALSLVRELGPVL 105

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA+M+ GR+GS+I AEIG M+I+E+IDA+ TM +D VR L++P+I A +I  PLLT + +
Sbjct: 106 TAIMLIGRAGSSISAEIGIMRISEQIDALSTMDVDPVRYLVTPKIIASLICFPLLTAIFD 165

Query: 276 FSAIIGA--SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
              I+G   S V+         +FFS+  S+  L+++  G IK+   A  +  ++   G+
Sbjct: 166 CVGILGGYFSSVLLSSRS---GIFFSKIQSSLLLSDVTGGFIKSFVFAFIVITISCYCGY 222

Query: 334 AVGVHSNSLGKK-----VTTCVVQSISIVIIID 361
               + +S G +      T+ VVQS   V++ D
Sbjct: 223 YTHQNQSSAGAEGVSNSTTSAVVQSCVYVLVSD 255


>gi|218885955|ref|YP_002435276.1| hypothetical protein DvMF_0852 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218756909|gb|ACL07808.1| protein of unknown function DUF140 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 267

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 121/217 (55%), Gaps = 5/217 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           ++ Q++ +G   + V++LI   TG V+  QG + L +FG+E      +++  +RE+G +L
Sbjct: 49  ILNQVFVIGSKSLFVILLIGVFTGMVLGLQGYYTLVKFGSEGLLGAAVALSLIRELGPVL 108

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA+M+ GR+GS++ AEIG M+I ++IDA+  M ++ +  L++PRI A +IS PLLT + +
Sbjct: 109 TAIMVTGRAGSSMAAEIGVMRITDQIDALDVMDINPMAYLVAPRIAASLISFPLLTAIFD 168

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              I+G  +       I   V+F R  ++  +A+I  G +K+   A  +  V+  +G+  
Sbjct: 169 VVGILGGYVTGVTLLGINEGVYFYRIQTSVEMADITGGFMKSVLFAVIVATVSCYQGYFT 228

Query: 336 -----GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
                GV    +    T+ VV S   V++ D +   F
Sbjct: 229 HMRRDGVGPEGVSNSTTSAVVLSCVFVLVADYVLTSF 265


>gi|28871581|ref|NP_794200.1| hypothetical protein PSPTO_4446 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28854833|gb|AAO57895.1| membrane protein, putative [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 265

 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 126/216 (58%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y VGV  + ++++     G V+A QG   L+++G+E     ++++  LRE+G ++
Sbjct: 48  LVKQLYSVGVMSLVIIVVSGMFIGMVLALQGFSILAKYGSEQAVGQMVALTLLRELGPVV 107

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  ISLP+L ++ +
Sbjct: 108 TALLFAGRAGSALSAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFS 167

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFA 334
              I GAS V   +  +    F+S   ++ +  N +  G+IK+   A  +  +A+ +G+ 
Sbjct: 168 VVGIWGASWVAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYD 227

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV +   V+ +D +     F 
Sbjct: 228 CDPTSEGISRATTKTVVYASLAVLGLDFILTALMFG 263


>gi|94986675|ref|YP_594608.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94730924|emb|CAJ54287.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 266

 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 117/210 (55%), Gaps = 5/210 (2%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           IRQ+Y +G   + V+ LI   TG V+  QG + L +FG+  F    +S+  +RE+G +LT
Sbjct: 48  IRQIYVIGTKSLFVISLIGLFTGMVLGLQGYYVLIKFGSVGFLGSAVSLTLIRELGPVLT 107

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A+MI  R+GS++ AEIG M+I ++IDA+  M +  +  L+SPRI A +IS PLLT + + 
Sbjct: 108 AIMIIARAGSSMTAEIGVMRITDQIDALEVMDIPGIGYLVSPRIVASLISFPLLTAVFDV 167

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV- 335
             IIG  +       +    +FS   S+ TL++I  G IKA   A  + ++   +G+   
Sbjct: 168 IGIIGGYLTGVCLLGVNEGAYFSSIESSTTLSDINEGSIKALTFAILVILICCYKGYNAH 227

Query: 336 ----GVHSNSLGKKVTTCVVQSISIVIIID 361
               G    ++    T+ VV S  +V+I D
Sbjct: 228 RRRDGRGPEAVANATTSAVVVSCVLVLIAD 257


>gi|163749276|ref|ZP_02156525.1| hypothetical protein KT99_08438 [Shewanella benthica KT99]
 gi|161330995|gb|EDQ01921.1| hypothetical protein KT99_08438 [Shewanella benthica KT99]
          Length = 260

 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 123/228 (53%), Gaps = 2/228 (0%)

Query: 144 ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203
           A   + KG  L  ++Q+Y VGV  + ++++     G V+A QG   L  FG E     ++
Sbjct: 33  AHKPRLKGLPL-FVKQLYVVGVQSMVLILISGLFIGMVLALQGYNILVGFGTEESLGPMV 91

Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263
           ++  LRE+G ++TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA 
Sbjct: 92  ALSLLRELGPVVTALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAG 151

Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMAC 322
           ++SLPLLT++     I G  IV  ++  I    F+S   ++     +I   LIK+     
Sbjct: 152 VVSLPLLTLMFTAIGIYGGYIVGVEWKGIDGGSFWSILQASVEWREDIVNCLIKSFLFGI 211

Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            +  +A+  G+ V  +   + K  T  VVQS   V+ +D L     F 
Sbjct: 212 VVTWIALYRGYQVVPNPEGISKATTQTVVQSSLAVLALDFLLTAIMFG 259


>gi|226943414|ref|YP_002798487.1| organic solvent tolerance ABC efflux transporter, permease
           [Azotobacter vinelandii DJ]
 gi|226718341|gb|ACO77512.1| organic solvent tolerance ABC efflux transporter, permease
           component [Azotobacter vinelandii DJ]
          Length = 265

 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 127/221 (57%), Gaps = 2/221 (0%)

Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210
           GF L L++Q++ +GV  +P++++     G V+A QG   L  +G+E     L+++  LRE
Sbjct: 44  GFQL-LVKQIHSIGVLSLPIIVVSGLFIGMVLALQGYNILVSYGSEQAVGQLVALTLLRE 102

Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
           +G ++T ++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +I+PR+WA  +S+PLL
Sbjct: 103 LGPVVTGLLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIIAPRLWAGFLSMPLL 162

Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAM 329
             + N   I GA++V   +  +    F++   S+  L  ++  G IK+   A  +  +A+
Sbjct: 163 AAIFNVVGIWGAAMVAVDWLGVYDGSFWASMQSSVDLYDDVVNGAIKSIAFAFVVTWIAV 222

Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            +G+     S  +G+  T  VV +   V+ +D +     F 
Sbjct: 223 FQGYDCEPTSEGIGRATTRTVVYASLAVLGLDFILTALMFG 263


>gi|269104097|ref|ZP_06156794.1| uncharacterized ABC transporter permease component YrbE
           [Photobacterium damselae subsp. damselae CIP 102761]
 gi|268163995|gb|EEZ42491.1| uncharacterized ABC transporter permease component YrbE
           [Photobacterium damselae subsp. damselae CIP 102761]
          Length = 260

 Score =  110 bits (276), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 120/216 (55%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y VGV  + ++++     G V++ QG   L  FGAE     ++++  LRE+G ++
Sbjct: 44  LLKQLYSVGVLSIAIILVSGLFIGMVLSLQGYIVLVDFGAETSLGQMVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+PLL ++  
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVIAPRFWAGVISMPLLAMMFT 163

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G  +V   +  I +  ++S   S+  +  +I  GL+KA   A  +  +A+  G+ 
Sbjct: 164 AVGIWGGQLVGVDWKGIDYGSYWSVMQSSVDVWYDIGNGLLKAVVFAITVTWIAVFNGYD 223

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV S   V+ +D +     F 
Sbjct: 224 AVPTSEGISRATTRTVVNSSLAVLGLDFVLTALMFG 259


>gi|91791861|ref|YP_561512.1| hypothetical protein Sden_0497 [Shewanella denitrificans OS217]
 gi|91713863|gb|ABE53789.1| protein of unknown function DUF140 [Shewanella denitrificans OS217]
          Length = 265

 Score =  110 bits (276), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 121/216 (56%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y +GV  + ++I+     G V+A QG   L  FG E     ++++  LRE+G ++
Sbjct: 49  LLKQIYVLGVRSMIIIIVSGLFIGMVMALQGYNVLVGFGTEESLGPMVALSLLREMGPVV 108

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+PLL ++ +
Sbjct: 109 TALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAIDPLRQVIAPRFWAGVISMPLLAVMFS 168

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G  +V  ++  I    F+S   ++     +I   LIK+   A  +  +A+  G+ 
Sbjct: 169 LVGIYGGHLVGVEWKGIDSGTFWSILQASIEWRQDIVNCLIKSTVFAVVVTWIALYRGYE 228

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           V  +   + +  T+ VVQ+   V+ +D L     F 
Sbjct: 229 VNPNPEGISRATTSTVVQASLAVLGLDFLLTAIMFG 264


>gi|315633782|ref|ZP_07889072.1| toluene efflux ABC superfamily ATP binding cassette transporter,
           membrane protein [Aggregatibacter segnis ATCC 33393]
 gi|315477824|gb|EFU68566.1| toluene efflux ABC superfamily ATP binding cassette transporter,
           membrane protein [Aggregatibacter segnis ATCC 33393]
          Length = 261

 Score =  110 bits (276), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 119/206 (57%), Gaps = 1/206 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I+Q++ +GV  + +++L     G V+  QG   L  F AE     L+++  LRE+G ++T
Sbjct: 45  IKQLHVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVT 104

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA II++P+L+I+   
Sbjct: 105 ALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGIIAMPILSIIFIA 164

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAV 335
             I G S+V   +  +    F+S   S+ T + +I  G IK+ F A A+  +A+  G+  
Sbjct: 165 IGIWGGSLVGVDWKGVDAGSFWSVMQSSVTWSHDILNGTIKSVFFAIAVVWIALFNGYDC 224

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361
              S  + K  T  VV +  +V+ +D
Sbjct: 225 IPTSEGISKATTRTVVHASLVVLGLD 250


>gi|330827998|ref|YP_004390950.1| ABC transporter permease [Aeromonas veronii B565]
 gi|328803134|gb|AEB48333.1| ABC-type transporter, permease subunit [Aeromonas veronii B565]
          Length = 259

 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 115/207 (55%), Gaps = 1/207 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q+Y VGV  V ++++     G V++ QG   L  FGAE     L+S+  LRE+G ++
Sbjct: 44  LIQQLYVVGVQSVAIILVSGLFIGMVLSLQGYNVLKDFGAEQSLGPLVSLSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +++PR WA +IS+PLL  + +
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLAFMFS 163

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G  +V   +  +    F+S   ++     +I  G IK+   A  +  +A+  G+ 
Sbjct: 164 LIGIFGGKLVGVDWLGVDEGGFWSAMQASVDWHEDIMQGAIKSLIFALVVTWIALFNGYD 223

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIID 361
               S  + +  T  VV S   V+ +D
Sbjct: 224 AKPTSAGISQATTRTVVHSSLAVLGLD 250


>gi|117618508|ref|YP_858369.1| putative ABC transporter, permease protein [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
 gi|117559915|gb|ABK36863.1| putative ABC transporter, permease protein [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
          Length = 259

 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 115/207 (55%), Gaps = 1/207 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y VGV  V ++++     G V++ QG   L  FGAE     L+S+  LRE+G ++
Sbjct: 44  LVQQLYVVGVQSVAIILVSGLFIGMVLSLQGYNVLKDFGAEQSLGPLVSLSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +++PR WA +IS+PLL  + +
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLAFMFS 163

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G  +V   +  +    F+S   ++     +I  G IK+   A  +  +A+  G+ 
Sbjct: 164 LIGIFGGKLVGVDWLGVDEGSFWSAMQASVDWQDDIMQGAIKSLIFALVVTWIALFNGYD 223

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIID 361
               S  + +  T  VV S   V+ +D
Sbjct: 224 AKPTSAGISQATTRTVVHSSLAVLGLD 250


>gi|329121164|ref|ZP_08249793.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Dialister micraerophilus
           DSM 19965]
 gi|327470327|gb|EGF15786.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Dialister micraerophilus
           DSM 19965]
          Length = 253

 Score =  110 bits (275), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 115/212 (54%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q   +GV+  P+V L    TG V + Q   +L ++GAE  +  +++I   RE+G +L  
Sbjct: 42  KQCLLLGVNSFPIVFLTLLFTGMVFSAQIVGELVKYGAEFTAGSIVAIGLGRELGPVLCG 101

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           V++AGR G+AI AE+G+M++ E+IDA+R M +D V  L+ PR+ A +I LP+L + A   
Sbjct: 102 VVLAGRVGAAITAELGTMRVTEQIDALRCMAVDPVEYLVLPRVIACMIMLPILDVFAVTI 161

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            + G  IV     +I   +++    S    ++++ G+IK  F    I +     G     
Sbjct: 162 GVGGGMIVASVTGNISSHMYWDSITSFCVASDLYIGMIKTVFFGMIIALTGCDRGITCET 221

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
            +  +GK  T  VV S+ ++ I++ + +   F
Sbjct: 222 GAEGVGKATTQSVVYSMIMIFIVNYILSTILF 253


>gi|94969917|ref|YP_591965.1| hypothetical protein Acid345_2890 [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551967|gb|ABF41891.1| protein of unknown function DUF140 [Candidatus Koribacter
           versatilis Ellin345]
          Length = 258

 Score =  110 bits (275), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 116/213 (54%), Gaps = 1/213 (0%)

Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211
           +L   ++Q   +GV  +P+VIL  F TGA +A   +  L +FG+   +  L+S   +RE+
Sbjct: 37  YLSDTLQQADLIGVGSLPIVILAGFFTGAALALNTSATLQKFGSITLTGQLVSYSMVREL 96

Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271
           G +LT +M+AGR+ S + +E+GSMK+ E+IDA+R +G D  + L++PR+ + ++ L  L+
Sbjct: 97  GPVLTGLMVAGRNSSGMASELGSMKVTEQIDAMRALGTDPSKKLVTPRVISTVVMLFFLS 156

Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
           I+++   + G  I+ W    +    +++  +      ++  GL+K       I  V    
Sbjct: 157 IISDLLGMAGGFIISWTLLGLDANQYWTTAYQALVFQDVLMGLVKPVVFGFFIASVGCYY 216

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           G      +  +G+  T  VV + S++II   LF
Sbjct: 217 GMNATGGTQGVGRATTQAVVTA-SVLIIASDLF 248


>gi|167625602|ref|YP_001675896.1| hypothetical protein Shal_3697 [Shewanella halifaxensis HAW-EB4]
 gi|167355624|gb|ABZ78237.1| protein of unknown function DUF140 [Shewanella halifaxensis
           HAW-EB4]
          Length = 261

 Score =  110 bits (275), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 119/216 (55%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y VGV  + ++++     G V+A QG   L  FG E     ++++  LRE+G ++
Sbjct: 45  LLRQLYVVGVQSMVIILVSGLFIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVV 104

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AE+G MK  E++ ++  M +D +R +I+PR WA +ISLPLL ++  
Sbjct: 105 TALLFAGRAGSALTAELGLMKSTEQLASLEMMAIDPLRQIIAPRFWAGVISLPLLALMFT 164

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G  IV  ++  I    F+S   ++     +I   +IK+   A  +  +A+  G+ 
Sbjct: 165 AVGIYGGHIVGVEWKGIDSGSFWSILQASVEWREDIVNCMIKSLLFAVVVTWIALYRGYH 224

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           V  +   + +  T  VVQS   V+ +D L     F 
Sbjct: 225 VIPNPEGISRATTQTVVQSSLAVLALDFLLTAIMFG 260


>gi|322515301|ref|ZP_08068298.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Actinobacillus ureae ATCC
           25976]
 gi|322118677|gb|EFX90889.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Actinobacillus ureae ATCC
           25976]
          Length = 258

 Score =  110 bits (275), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 116/206 (56%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q+Y +GV  + +++L     G V+  QG   L  F AE     L+S+  LRE+G ++
Sbjct: 43  LIKQLYVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFAAETSLGTLVSLSLLRELGPVV 102

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+P+L  +  
Sbjct: 103 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRIIAPRFWAGVISMPILAAIFT 162

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              I G S+V   +  +    F+S   ++   +++  G IK+   A A+  +A+  G+  
Sbjct: 163 AIGIWGGSLVGVDWKGVDGGSFWSVMQNSVDWSDLINGFIKSIIFAFAVVWIALFNGYDS 222

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361
              S  + +  T  VV +  +V+ +D
Sbjct: 223 VATSEGISQATTRTVVHASLVVLGLD 248


>gi|284036726|ref|YP_003386656.1| hypothetical protein Slin_1812 [Spirosoma linguale DSM 74]
 gi|283816019|gb|ADB37857.1| protein of unknown function DUF140 [Spirosoma linguale DSM 74]
          Length = 271

 Score =  110 bits (275), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 113/213 (53%), Gaps = 4/213 (1%)

Query: 147 YKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206
           Y+FK     ++RQ Y VG   + ++    F+TG V   Q    LS+FGA  +   L++I 
Sbjct: 48  YEFK----EIVRQCYEVGFRSLLLISTTGFITGIVFTNQSRPSLSEFGATSWLPSLIAIA 103

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            +R +G L+TA++ AG+ GS+I AE+GSM + E+IDA+   G D  + L+  R+ A   +
Sbjct: 104 IVRALGPLVTALIAAGKVGSSIGAELGSMNVTEQIDAMEVSGTDPFKFLVVTRVLATSFT 163

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326
           +PLLT+   F  +IGA I + +     F  F        T  +IF  ++K+      IG+
Sbjct: 164 IPLLTMYTIFVGLIGAYINVNQNEQTSFTSFMQEVFGAITYLDIFASVLKSIVFGFTIGM 223

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           V   +G+     +  +GK   + VV S+ +V I
Sbjct: 224 VGCYKGYHSSKGTEGVGKAANSAVVTSMFLVFI 256


>gi|46143493|ref|ZP_00135103.2| COG0767: ABC-type transport system involved in resistance to
           organic solvents, permease component [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126208757|ref|YP_001053982.1| hypothetical protein APL_1291 [Actinobacillus pleuropneumoniae L20]
 gi|307248316|ref|ZP_07530341.1| hypothetical protein appser2_12940 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307257357|ref|ZP_07539127.1| hypothetical protein appser10_13550 [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|307259627|ref|ZP_07541351.1| hypothetical protein appser11_14250 [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|307261768|ref|ZP_07543434.1| hypothetical protein appser12_13270 [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|307263956|ref|ZP_07545559.1| hypothetical protein appser13_13640 [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|126097549|gb|ABN74377.1| hypothetical protein APL_1291 [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
 gi|306855186|gb|EFM87364.1| hypothetical protein appser2_12940 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306864207|gb|EFM96120.1| hypothetical protein appser10_13550 [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306866272|gb|EFM98136.1| hypothetical protein appser11_14250 [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306868586|gb|EFN00397.1| hypothetical protein appser12_13270 [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306870718|gb|EFN02459.1| hypothetical protein appser13_13640 [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 234

 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 118/215 (54%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q+Y +GV  + +++L     G V+  QG   L  F AE     L+S+  LRE+G ++
Sbjct: 19  LIKQLYVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFAAETSLGTLVSLSLLRELGPVV 78

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+P+L  +  
Sbjct: 79  TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRIIAPRFWAGVISMPILAAIFT 138

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              I G S+V   +  +    F+S   ++   +++  G IK+   A A+  +A+  G+  
Sbjct: 139 AIGIWGGSLVGVDWKGVDGGSFWSVMQNSVDWSDLINGFIKSIIFAFAVVWIALFNGYDS 198

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
              S  + +  T  VV +  +V+ +D +     F 
Sbjct: 199 VATSEGISQATTRTVVHASLVVLGLDFILTAIMFG 233


>gi|152978463|ref|YP_001344092.1| hypothetical protein Asuc_0787 [Actinobacillus succinogenes 130Z]
 gi|150840186|gb|ABR74157.1| protein of unknown function DUF140 [Actinobacillus succinogenes
           130Z]
          Length = 259

 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 116/206 (56%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q++ +GV  + ++++  F  G V+  QG   L  F AE     L+++  LRE+G ++
Sbjct: 44  LIKQLHVLGVQSLLIILMSGFFIGMVLGLQGYVVLVDFAAEANVGQLVALALLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +I++P+L +L  
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPILAVLFT 163

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              +IG S++   +  I    F+S   +     ++  G IK+   A  +  VA+  G+  
Sbjct: 164 AVGVIGGSLIGVDWKGIDGGSFWSVMQNAVASKDLLYGFIKSVVFAFTVVWVALFNGYDC 223

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361
              S  + +  T  VV S  +V+ +D
Sbjct: 224 VPTSEGISQATTKTVVHSSLLVLGLD 249


>gi|145630177|ref|ZP_01785959.1| hypothetical protein CGSHi22421_08998 [Haemophilus influenzae
           R3021]
 gi|260581861|ref|ZP_05849657.1| ABC transporter permease [Haemophilus influenzae NT127]
 gi|144984458|gb|EDJ91881.1| hypothetical protein CGSHi22421_08998 [Haemophilus influenzae
           R3021]
 gi|260095054|gb|EEW78946.1| ABC transporter permease [Haemophilus influenzae NT127]
          Length = 261

 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 123/218 (56%), Gaps = 1/218 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++QM+ +GV  + +++L     G V+  QG   L  F AE     L+++  LRE+G ++
Sbjct: 44  LVKQMHVLGVQSLLIILLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+P+L+IL  
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPILSILFI 163

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G S+V   +  +    F+S   ++ + + +I  G IKA F A A+  +A+  G+ 
Sbjct: 164 AIGIWGGSLVGVDWKGVDSGSFWSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYD 223

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
               S  + +  T  VV +  +V+ +D +     F  G
Sbjct: 224 CMPTSEGISQATTRTVVHASLVVLGLDFILTAIMFGAG 261


>gi|104780316|ref|YP_606814.1| toluene tolerance ABC efflux transporter permease [Pseudomonas
           entomophila L48]
 gi|95109303|emb|CAK14000.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas
           entomophila L48]
          Length = 265

 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 125/216 (57%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y VGV  + ++++     G V+A QG   L+++G+E     ++++  LRE+G ++
Sbjct: 48  LVKQLYSVGVLSLAIIVVSGVFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVV 107

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  ISLPLL ++ +
Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFS 167

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G S V   +  +    F+    ++ + + ++  GLIK+   A  +  +A+ +G+ 
Sbjct: 168 VVGIWGGSWVAVDWLGVYEGSFWGNMQNSVSFSDDVINGLIKSLVFAFVVTWIAVFQGYD 227

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV +   V+ +D +     F 
Sbjct: 228 CEPTSEGISRATTKTVVYASLAVLGLDFILTALMFG 263


>gi|165976711|ref|YP_001652304.1| permease [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
 gi|303250627|ref|ZP_07336824.1| permease [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|303252079|ref|ZP_07338248.1| permease [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|307246209|ref|ZP_07528290.1| hypothetical protein appser1_14130 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307250543|ref|ZP_07532487.1| hypothetical protein appser4_13230 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307252926|ref|ZP_07534814.1| hypothetical protein appser6_14370 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307255189|ref|ZP_07537007.1| hypothetical protein appser9_14250 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|165876812|gb|ABY69860.1| probable permease [Actinobacillus pleuropneumoniae serovar 3 str.
           JL03]
 gi|302649061|gb|EFL79248.1| permease [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|302650615|gb|EFL80774.1| permease [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|306852818|gb|EFM85042.1| hypothetical protein appser1_14130 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306857436|gb|EFM89548.1| hypothetical protein appser4_13230 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306859564|gb|EFM91589.1| hypothetical protein appser6_14370 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306862062|gb|EFM94038.1| hypothetical protein appser9_14250 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
          Length = 258

 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 116/206 (56%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q+Y +GV  + +++L     G V+  QG   L  F AE     L+S+  LRE+G ++
Sbjct: 43  LIKQLYVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFAAETSLGTLVSLSLLRELGPVV 102

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+P+L  +  
Sbjct: 103 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRIIAPRFWAGVISMPILAAIFT 162

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              I G S+V   +  +    F+S   ++   +++  G IK+   A A+  +A+  G+  
Sbjct: 163 AIGIWGGSLVGVDWKGVDGGSFWSVMQNSVDWSDLINGFIKSIIFAFAVVWIALFNGYDS 222

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361
              S  + +  T  VV +  +V+ +D
Sbjct: 223 VATSEGISQATTRTVVHASLVVLGLD 248


>gi|114564530|ref|YP_752044.1| hypothetical protein Sfri_3369 [Shewanella frigidimarina NCIMB 400]
 gi|114335823|gb|ABI73205.1| protein of unknown function DUF140 [Shewanella frigidimarina NCIMB
           400]
          Length = 261

 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 121/216 (56%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q+Y +GV  + ++++     G V+A QG   L +FG E     ++++  LRE+G ++
Sbjct: 45  LIKQVYVLGVRSMVIILVSGLFIGMVLALQGYNILVEFGTEESLGPMVALSLLRELGPVV 104

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+PLL ++ +
Sbjct: 105 AALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLALMFS 164

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334
              I+G  +V  ++  I    F+S   ++     +I   LIK+      +  +A+  G+ 
Sbjct: 165 LVGILGGHLVGVEWKGIDSGAFWSILRASVEWREDIVNCLIKSVIFGVVVTWIALYRGYE 224

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           V  +   + +  T+ VVQ+   V+ +D L     F 
Sbjct: 225 VQPNPEGISRATTSTVVQASLAVLALDFLLTAIMFG 260


>gi|212703465|ref|ZP_03311593.1| hypothetical protein DESPIG_01509 [Desulfovibrio piger ATCC 29098]
 gi|212673125|gb|EEB33608.1| hypothetical protein DESPIG_01509 [Desulfovibrio piger ATCC 29098]
          Length = 264

 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 121/216 (56%), Gaps = 5/216 (2%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I+Q+Y +G   + V++LI    G V+  QG + L QFG+       +S+  +RE+G +LT
Sbjct: 47  IQQLYVIGYKSLFVILLIGIFCGMVLGLQGYYTLVQFGSVGMLGSAVSLSLIRELGPVLT 106

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A+M+AGR+GS++ AEIG M+I+++IDA+  M ++ +  L+SPR+ A +++ PLLT + + 
Sbjct: 107 AIMLAGRAGSSMAAEIGVMRISDQIDALDVMDINSMAYLVSPRLVASLLAFPLLTAIFDV 166

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
             IIG  +       I    +  R  S+ T+ ++  G IK+      +  V   +G+   
Sbjct: 167 IGIIGGYLTGVLMLHINEGAYLYRIASSVTMNDVAGGFIKSLVFGLLVATVCCHQGYTTH 226

Query: 337 VHSNSLGKK-----VTTCVVQSISIVIIIDSLFAIF 367
           +  +S+G +      T+ VV S  ++++ D +   F
Sbjct: 227 MRRDSVGPEAVGNATTSAVVISCVLILVADYVLTSF 262


>gi|282891606|ref|ZP_06300097.1| hypothetical protein pah_c180o100 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498574|gb|EFB40902.1| hypothetical protein pah_c180o100 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 262

 Score =  110 bits (274), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 117/206 (56%), Gaps = 1/206 (0%)

Query: 155 SLIR-QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
           SLIR QM+ +GV  +PVV +  F TG V+A Q  FQLS  G    +  +++   + E+G 
Sbjct: 33  SLIRDQMFEIGVMSLPVVAITGFSTGLVLAAQSFFQLSDKGLASATGLMVTKAMMVELGP 92

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           +LTA M+ GR G+++ AE+G+M++ E+IDA+R+M ++ +R LI+PR  A    LPLLTI 
Sbjct: 93  ILTAFMVTGRVGASMCAELGTMRVTEQIDALRSMSVNPLRYLIAPRFIAGTTMLPLLTIF 152

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
           +    I+G  ++   YY +P + F           ++ +GLIKA      I  ++   G 
Sbjct: 153 SCLMGILGGYLLSVYYYQMPPSTFLDPLPLHIKTFDMVSGLIKAFIFGIIIITISCYRGL 212

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVII 359
           +    +  +G+  T  VV   S+++I
Sbjct: 213 STRGGAAGVGRATTNSVVICYSVILI 238


>gi|319897434|ref|YP_004135631.1| abc-type transport system protein, permease component [Haemophilus
           influenzae F3031]
 gi|317432940|emb|CBY81307.1| conserved ABC-type transport system protein,permease component
           [Haemophilus influenzae F3031]
          Length = 261

 Score =  110 bits (274), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 123/218 (56%), Gaps = 1/218 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++QM+ +GV  + +++L     G V+  QG   L  F AE     L+++  LRE+G ++
Sbjct: 44  LVKQMHVLGVQSLLIILLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+P+L+IL  
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPVLSILFI 163

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G S+V   +  +    F+S   ++ + + +I  G IKA F A A+  +A+  G+ 
Sbjct: 164 AIGIWGGSLVGVDWKGVDSGSFWSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYD 223

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
               S  + +  T  VV +  +V+ +D +     F  G
Sbjct: 224 CMPTSEGISQATTRTVVHASLVVLGLDFILTAIMFGAG 261


>gi|145640771|ref|ZP_01796354.1| hypothetical protein CGSHiR3021_06880 [Haemophilus influenzae
           R3021]
 gi|319776661|ref|YP_004139149.1| ABC transporter permease [Haemophilus influenzae F3047]
 gi|329124179|ref|ZP_08252726.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Haemophilus aegyptius
           ATCC 11116]
 gi|145274697|gb|EDK14560.1| hypothetical protein CGSHiR3021_06880 [Haemophilus influenzae
           22.4-21]
 gi|317451252|emb|CBY87486.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae F3047]
 gi|327467604|gb|EGF13102.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Haemophilus aegyptius
           ATCC 11116]
          Length = 261

 Score =  110 bits (274), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 123/218 (56%), Gaps = 1/218 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++QM+ +GV  + +++L     G V+  QG   L  F AE     L+++  LRE+G ++
Sbjct: 44  LVKQMHVLGVQSLLIILLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+P+L+IL  
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPVLSILFI 163

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G S+V   +  +    F+S   ++ + + +I  G IKA F A A+  +A+  G+ 
Sbjct: 164 AIGIWGGSLVGVDWKGVDSGSFWSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYD 223

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
               S  + +  T  VV +  +V+ +D +     F  G
Sbjct: 224 CMPTSEGISQATTRTVVHASLVVLGLDFILTAIMFGAG 261


>gi|310817867|ref|YP_003950225.1| ABC transporter permease [Stigmatella aurantiaca DW4/3-1]
 gi|309390939|gb|ADO68398.1| ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1]
          Length = 250

 Score =  110 bits (274), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 117/206 (56%), Gaps = 3/206 (1%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGV 213
           +L+    ++GV  +P+ +L S   G VI+ Q  F L++FG + +++  + +L L RE+  
Sbjct: 34  ALVYHTEFLGVRSMPIALLTSTFAGLVISLQFGFFLARFGVQ-YTVGRVVVLTLFRELAP 92

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           +LTA+ +  R GS + AE+G+M + E++DAIR +G D +R L+ PR+ A ++ +P LT+L
Sbjct: 93  VLTALTVGARIGSGMAAELGAMTVTEQVDAIRALGADPLRKLVVPRVLACLLVMPTLTVL 152

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
           A+   +   ++V+   Y I F +FF        + +  +G+IK       IG+V   +G 
Sbjct: 153 ADVIGLGAGALVVNMQYAISFDLFFQGALDAVLMTDFVSGVIKGAIFGVIIGLVGCFKGL 212

Query: 334 AVGVHSNSLGKKVT-TCVVQSISIVI 358
            V   +  +G+  T T  + S+S+ +
Sbjct: 213 TVEGGTEGVGRATTQTVAITSVSVCL 238


>gi|121534945|ref|ZP_01666764.1| protein of unknown function DUF140 [Thermosinus carboxydivorans
           Nor1]
 gi|121306544|gb|EAX47467.1| protein of unknown function DUF140 [Thermosinus carboxydivorans
           Nor1]
          Length = 256

 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 118/229 (51%), Gaps = 1/229 (0%)

Query: 142 FCASSYKFKGFLLSL-IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSI 200
           F  + Y  + F L L +RQ  ++GV  +P+V+L    TG V+  Q A +  ++GA+    
Sbjct: 27  FTETIYHLRRFNLKLTLRQAAHLGVDSLPIVLLTILFTGMVMTVQTAHEFIKYGAQSSVG 86

Query: 201 DLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRI 260
            ++++   RE+  +LT V+ AGR G+AI AEIGSMK+ E+IDA+R M  + +  L+ PR+
Sbjct: 87  GVVAVAMGRELAPVLTGVVAAGRVGAAITAEIGSMKVTEQIDALRVMATNPIAYLVVPRL 146

Query: 261 WALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320
            A +  LP+L + A+     G  +V   Y  I    +         + ++  GLIKA   
Sbjct: 147 VACVFMLPILVVFADVIGTFGGYLVATLYAGIGSFTYLHSIKVFTAINDVTGGLIKAMVF 206

Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              I I+   +G      +  +G+  T  VV SI ++ + +   ++  +
Sbjct: 207 GAIIAIIGCYKGLTTDEGAEGVGRATTGSVVASIILIFVTNYFLSLLLY 255


>gi|157373873|ref|YP_001472473.1| hypothetical protein Ssed_0734 [Shewanella sediminis HAW-EB3]
 gi|157316247|gb|ABV35345.1| protein of unknown function DUF140 [Shewanella sediminis HAW-EB3]
          Length = 260

 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 123/228 (53%), Gaps = 2/228 (0%)

Query: 144 ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203
           A   + KGF L  ++Q+Y VGV  + ++ +     G V+A QG   L  FG E     ++
Sbjct: 33  ARKPRIKGFPL-FVKQLYVVGVQSMVLIFVSGLFIGMVLALQGYNILVGFGTEESLGPMV 91

Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263
           ++  LRE+G ++TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA 
Sbjct: 92  ALSLLRELGPVVTALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAG 151

Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMAC 322
           ++SLPLL ++     I G  +V  ++  I    F+S   ++     +I   +IK+   A 
Sbjct: 152 VVSLPLLALIFTAVGIYGGHVVGVEWKGIDSGSFWSILQASVEWREDIVNCIIKSLVFAV 211

Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            +  +A+  G+ V  +   + K  T  VVQS   V+ +D L     F 
Sbjct: 212 VVTWIALYRGYRVIPNPEGISKATTQTVVQSSLAVLALDFLLTAVMFG 259


>gi|190150611|ref|YP_001969136.1| hypothetical protein APP7_1342 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|189915742|gb|ACE61994.1| hypothetical protein APP7_1342 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
          Length = 276

 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 116/206 (56%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q+Y +GV  + +++L     G V+  QG   L  F AE     L+S+  LRE+G ++
Sbjct: 61  LIKQLYVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFAAETSLGTLVSLSLLRELGPVV 120

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+P+L  +  
Sbjct: 121 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRIIAPRFWAGVISMPILAAIFT 180

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              I G S+V   +  +    F+S   ++   +++  G IK+   A A+  +A+  G+  
Sbjct: 181 AIGIWGGSLVGVDWKGVDGGSFWSVMQNSVDWSDLINGFIKSIIFAFAVVWIALFNGYDS 240

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361
              S  + +  T  VV +  +V+ +D
Sbjct: 241 VATSEGISQATTRTVVHASLVVLGLD 266


>gi|115378323|ref|ZP_01465489.1| ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1]
 gi|115364677|gb|EAU63746.1| ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1]
          Length = 274

 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 117/206 (56%), Gaps = 3/206 (1%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGV 213
           +L+    ++GV  +P+ +L S   G VI+ Q  F L++FG + +++  + +L L RE+  
Sbjct: 58  ALVYHTEFLGVRSMPIALLTSTFAGLVISLQFGFFLARFGVQ-YTVGRVVVLTLFRELAP 116

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           +LTA+ +  R GS + AE+G+M + E++DAIR +G D +R L+ PR+ A ++ +P LT+L
Sbjct: 117 VLTALTVGARIGSGMAAELGAMTVTEQVDAIRALGADPLRKLVVPRVLACLLVMPTLTVL 176

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
           A+   +   ++V+   Y I F +FF        + +  +G+IK       IG+V   +G 
Sbjct: 177 ADVIGLGAGALVVNMQYAISFDLFFQGALDAVLMTDFVSGVIKGAIFGVIIGLVGCFKGL 236

Query: 334 AVGVHSNSLGKKVT-TCVVQSISIVI 358
            V   +  +G+  T T  + S+S+ +
Sbjct: 237 TVEGGTEGVGRATTQTVAITSVSVCL 262


>gi|144898324|emb|CAM75188.1| ABC transporter permease protein [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 267

 Score =  109 bits (273), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 120/210 (57%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           S+  Q   +G++ +P++ ++S   G ++A QG + L  FGAE      +++  +RE   L
Sbjct: 52  SVAAQAMDIGIAALPIITVLSTTIGLMLAIQGIYTLKTFGAESRVTLGVALSVVREFAPL 111

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +T +++AGRSGSA+ A +G+M+IN+EID++  MG++ VR L++P + A+++ +PLLT+ A
Sbjct: 112 ITGILVAGRSGSALAARLGTMRINQEIDSLTVMGINPVRFLVAPPLAAMMVLMPLLTLWA 171

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
           +   +  A + I        A +     S   L ++  GL K+      + IV +  G +
Sbjct: 172 DLVGLFAAGLYISIELQGTMAGYADEVLSLLKLNDLLHGLAKSAIFGVLVTIVGVVNGAS 231

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           V   +  +G+  T  VV +IS ++I D +F
Sbjct: 232 VSGGAEGVGRMTTRSVVHAISAIVITDMIF 261


>gi|198282478|ref|YP_002218799.1| hypothetical protein Lferr_0338 [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218667295|ref|YP_002424668.1| toluene tolerance protein Ttg2B, putative [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|198246999|gb|ACH82592.1| protein of unknown function DUF140 [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218519508|gb|ACK80094.1| toluene tolerance protein Ttg2B, putative [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 260

 Score =  109 bits (273), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 142/265 (53%), Gaps = 8/265 (3%)

Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
           +F     ++G++ ++ + +  + +  L L +     F  ++  F   +  L++Q+Y  GV
Sbjct: 2   AFMEFIPNLGRRTLRTVPNLGTASRFLLLSL-----FAVANRHFS--IQQLLKQVYGFGV 54

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             + ++++ +F TG V+  QG + L +FGA      L+++  LRE+G +LTA++ AGR+G
Sbjct: 55  RSLLLMMVAAFFTGMVLGFQGYYALVRFGATSALGTLVALSLLRELGPVLTALLFAGRAG 114

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           SA+ AEI SMK  E++ A+  M ++ +  +++PR+WA I+ +P+L ++ +   I G  ++
Sbjct: 115 SALTAEISSMKATEQLSAMEMMAVNPLAWVVAPRLWAGILVVPILCVIFDLVGIFGGYLI 174

Query: 286 IWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
                 +    F+++  S    + +I TGL KA      +  +A  +G+A    +  +G 
Sbjct: 175 SVPVLGVDGGTFWAQMQSNVAFSGDILTGLFKALCFGLVVTWIAAWQGYAAQPTAEGVGN 234

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYF 369
             T  VV +   V+ +D +   F F
Sbjct: 235 ATTISVVTASLAVLGLDFILTAFLF 259


>gi|94264494|ref|ZP_01288281.1| Protein of unknown function DUF140 [delta proteobacterium MLMS-1]
 gi|94266598|ref|ZP_01290280.1| Protein of unknown function DUF140 [delta proteobacterium MLMS-1]
 gi|93452769|gb|EAT03307.1| Protein of unknown function DUF140 [delta proteobacterium MLMS-1]
 gi|93455053|gb|EAT05280.1| Protein of unknown function DUF140 [delta proteobacterium MLMS-1]
          Length = 263

 Score =  109 bits (273), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 117/216 (54%), Gaps = 6/216 (2%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
            ++RQ   +G + +PV+   +  TG V+  QG + L QFGAE      +++  +RE+G +
Sbjct: 43  EVVRQTRLIGANSLPVIFFTAAFTGMVLGLQGYYTLRQFGAESALGSAVALSLIRELGPV 102

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           LTA+M+ GR+GSA+ AEIG M+ +E+IDA+  M +D  R LI+P++ A +IS+PLLT++ 
Sbjct: 103 LTALMVIGRAGSAMCAEIGIMRNSEQIDALECMAVDPFRYLIAPKLLATMISIPLLTLIF 162

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
           N   I G  +       +    +F+    +   A+I  G+IK+   A  +  +    G+ 
Sbjct: 163 NVVGIFGGYVAGVMLLGVNPGSYFAGMEQSVVDADIRMGIIKSLVFALLVVWICTARGYY 222

Query: 335 V------GVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           V      G  +  + +  T  VV S   V++ D L 
Sbjct: 223 VHAIRGAGFGAEGVSRATTQAVVFSSISVLLFDYLL 258


>gi|254362425|ref|ZP_04978534.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mannheimia haemolytica PHL213]
 gi|261494094|ref|ZP_05990597.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mannheimia haemolytica serotype A2 str. BOVINE]
 gi|261496065|ref|ZP_05992475.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|153094014|gb|EDN74930.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mannheimia haemolytica PHL213]
 gi|261308315|gb|EEY09608.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261310260|gb|EEY11460.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mannheimia haemolytica serotype A2 str. BOVINE]
          Length = 258

 Score =  109 bits (273), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 134/263 (50%), Gaps = 9/263 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHIL-GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167
           N    IG  ++ FI      A +L G +I           +F+     LI+Q+Y +GV  
Sbjct: 3   NFISSIGAVVINFIRTLGRSAFMLWGALIGKP--------EFRKHTPLLIKQLYVLGVQS 54

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           + +++L     G V+  QG   L  F AE     L+S+  LRE+G ++TA++ AGR+GSA
Sbjct: 55  LLIIMLSGLFIGMVLGLQGYVVLVDFAAESSLGTLVSLSLLRELGPVVTALLFAGRAGSA 114

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + AEIG MK  E++ ++  M +D +R +I+PR WA +IS+P+L  +     I G S+V  
Sbjct: 115 LTAEIGLMKATEQLSSLEMMAVDPLRRIIAPRFWAGVISMPVLAAIFTAIGIWGGSLVGV 174

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
            +  +    F+S   ++   +++  G IK+   A A+  +A+  G+     S  + +  T
Sbjct: 175 DWKGVDGGSFWSVMQNSVNTSDLINGFIKSVIFAFAVVWIALFNGYDCVPTSEGISQATT 234

Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370
             VV +  +++ +D +     F 
Sbjct: 235 RTVVNASLVILGLDFILTAIMFG 257


>gi|182412508|ref|YP_001817574.1| hypothetical protein Oter_0685 [Opitutus terrae PB90-1]
 gi|177839722|gb|ACB73974.1| protein of unknown function DUF140 [Opitutus terrae PB90-1]
          Length = 250

 Score =  109 bits (273), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 115/208 (55%), Gaps = 2/208 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI Q + +G + +P+V ++SF  G+V+A Q  + +   GA+ +   L+ +   RE+G ++
Sbjct: 35  LIEQCFTIGYTTLPIVAILSFFIGSVLALQAGYAMQNVGAKQYIGSLVGLSMARELGPVM 94

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A+++AGR GS+I AE+ SMK+ +E+DA+ TM +   R+L+ PR+ A++  +P+L ++AN
Sbjct: 95  VAILLAGRVGSSIAAELASMKVYQEVDALVTMNIPPERMLVLPRLIAVLFMMPVLVMIAN 154

Query: 276 FSAIIGASIVI--WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
                G +IV     +  I    +F+         ++  GLIKA      + +V    G 
Sbjct: 155 LVGWFGGAIVAKYTTFISIDPPAYFAVLRRYTEFKDVLNGLIKAEVFGFGVVLVCCNIGL 214

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIID 361
                   +G  VT  VV S+ ++++++
Sbjct: 215 NTRGGPREIGAAVTQAVVTSLILILVLN 242


>gi|16273014|ref|NP_439243.1| ABC transporter permease [Haemophilus influenzae Rd KW20]
 gi|260580171|ref|ZP_05848001.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
 gi|1176838|sp|P45030|Y1086_HAEIN RecName: Full=Probable ABC transporter permease protein HI_1086
 gi|1574640|gb|AAC22742.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
 gi|260093455|gb|EEW77388.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
          Length = 261

 Score =  109 bits (273), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 123/218 (56%), Gaps = 1/218 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++QM+ +GV  + +++L     G V+  QG   L  F AE     L+++  LRE+G ++
Sbjct: 44  LVKQMHVLGVQSLLIILLSGLFIGMVLGLQGYVVLIDFSAETSLGQLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+P+L+IL  
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPVLSILFI 163

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G S+V   +  +    F+S   ++ + + +I  G IKA F A A+  +A+  G+ 
Sbjct: 164 AIGIWGGSLVGVDWKGVDSGSFWSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYD 223

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
               S  + +  T  VV +  +V+ +D +     F  G
Sbjct: 224 CMPTSEGISQATTRTVVHASLVVLGLDFILTAIMFGAG 261


>gi|319789984|ref|YP_004151617.1| protein of unknown function DUF140 [Thermovibrio ammonificans HB-1]
 gi|317114486|gb|ADU96976.1| protein of unknown function DUF140 [Thermovibrio ammonificans HB-1]
          Length = 260

 Score =  109 bits (273), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 117/213 (54%), Gaps = 3/213 (1%)

Query: 154 LSLIRQMYY---VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210
           L L R +YY   +G   +PV+ + S  TG VIA +      +F AE     +++I   RE
Sbjct: 38  LRLKRFIYYLATIGSDSIPVIAVTSLFTGGVIALETYNAFHRFNAEFMIGAVVAISMARE 97

Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
           +  +L+A+++  RSGSA+ AEIG+M++ E+IDA+  M ++ ++ LI+PRI+A  ISL  L
Sbjct: 98  LSPVLSALLVTARSGSAMAAEIGTMRVTEQIDALEMMAVNPIKFLITPRIYATTISLVFL 157

Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330
           T++A+    IG  +V    + +   ++     + A + ++F GLIKA      +  ++  
Sbjct: 158 TVIADIIGYIGGYLVSVHIFGVNKTLYLRYTQNFAHMEDVFHGLIKAAVFGFLLSTISCL 217

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
            G+     +  +G+  T  VV S   ++I D L
Sbjct: 218 YGYYTRGGAKGVGESTTKAVVSSSIAILIFDYL 250


>gi|303327433|ref|ZP_07357874.1| ABC transporter, permease protein [Desulfovibrio sp. 3_1_syn3]
 gi|302862373|gb|EFL85306.1| ABC transporter, permease protein [Desulfovibrio sp. 3_1_syn3]
          Length = 375

 Score =  109 bits (272), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 118/217 (54%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +  MY  GV  +P++ + S + G ++A  GA QL+QFGA+I+   L+ I  LR +G ++ 
Sbjct: 159 VAAMYECGVQALPIISVTSMLFGLILAFVGAVQLTQFGAQIYVAGLVGIGMLRVMGAVMV 218

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
            V+++GR G+A  A IG+M++NEE+DA+ T+G+  V  L+ PR+ AL   +PLLT+ A+ 
Sbjct: 219 GVVMSGRVGAAYAALIGTMQVNEEVDALATLGISPVDFLVLPRVLALTAMVPLLTLYADL 278

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
             ++G  +V     D+    + +         ++  GL+        I +    +G   G
Sbjct: 279 MGVLGGYLVGVMMLDLNPMEYINATTQMVPFKHVLIGLVYGTVFGVVIAVAGCYQGMRCG 338

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
             + ++G+  TT VV SI  +I+  +   +    +G+
Sbjct: 339 RSAQAVGQATTTAVVHSIVGIIVATAAITVICNVLGV 375


>gi|90413007|ref|ZP_01221005.1| hypothetical protein P3TCK_24185 [Photobacterium profundum 3TCK]
 gi|90326022|gb|EAS42461.1| hypothetical protein P3TCK_24185 [Photobacterium profundum 3TCK]
          Length = 260

 Score =  109 bits (272), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 119/216 (55%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y VGV  + ++++     G V++ QG   L  FGAE     ++++  LRE+G ++
Sbjct: 44  LMKQLYSVGVLSIAIIMVSGLFIGMVLSLQGYIVLVDFGAETSLGQMVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+PLL ++ +
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVIAPRFWAGVISMPLLAMMFS 163

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G  +V   +  I +  F+S   ++  L  +I    IK+   A  I  +A+  G+ 
Sbjct: 164 AVGIWGGQLVGVDWKGIDYGSFWSVMQASVELGEDIGNSFIKSVVFAITITWIAVFNGYD 223

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV S   V+ +D +     F 
Sbjct: 224 AVPTSEGISRATTRTVVNSSLAVLGLDFVLTALMFG 259


>gi|218710669|ref|YP_002418290.1| ABC transport protein: transmembrane protein (IM) [Vibrio
           splendidus LGP32]
 gi|218323688|emb|CAV20020.1| ABC transport protein: transmembrane protein (IM) [Vibrio
           splendidus LGP32]
          Length = 261

 Score =  109 bits (272), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 73/224 (32%), Positives = 122/224 (54%), Gaps = 2/224 (0%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           K K F L L++Q Y VGV  + ++++     G V++ QG   L  +GAE     ++++  
Sbjct: 38  KLKNFPL-LVKQFYSVGVQSLAIILVSGLFIGMVLSLQGYVVLIDYGAEGNLGQMVALSL 96

Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267
           LRE+G ++TA++ AGR+GSA+ AEIG MK  E+I ++  M +D ++ +I+PR+WA +IS+
Sbjct: 97  LRELGPVVTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLKRIIAPRLWAGLISM 156

Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGI 326
           PLL ++     I GA +V   +  I    F+S   S+  L  +I   +IK    A  +  
Sbjct: 157 PLLAMIFMAVGIWGAQLVGVDWKGIDHGSFWSAMQSSVELGRDIGNSMIKCMVFAITVTW 216

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +A+  G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 217 IALFNGYDAVPTSEGISQATTRTVVHSSLAVLGLDFVLTALMFG 260


>gi|127514231|ref|YP_001095428.1| hypothetical protein Shew_3303 [Shewanella loihica PV-4]
 gi|126639526|gb|ABO25169.1| protein of unknown function DUF140 [Shewanella loihica PV-4]
          Length = 261

 Score =  109 bits (272), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 119/216 (55%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q+Y +GV  + ++++     G V+A QG   L  FG E     ++++  LRE+G ++
Sbjct: 45  LIKQLYVIGVQSMVIILVSGLFIGMVLALQGYNILVGFGTEDSLGPMVALSLLRELGPVV 104

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +ISLPLL ++  
Sbjct: 105 TALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAIDPLRQVIAPRFWAGVISLPLLALMFT 164

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G  +V  ++  I    F+S   ++     +I   LIK+   A  +  +A+  G+ 
Sbjct: 165 AVGIYGGHLVGVEWKGIDSGSFWSILQASVEWRQDIVNCLIKSLVFAVVVTWIALYRGYH 224

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           V  +   + +  T  VVQS   V+ +D L     F 
Sbjct: 225 VIPNPEGISRATTQTVVQSSLAVLALDFLLTAMMFG 260


>gi|71282011|ref|YP_271183.1| hypothetical protein CPS_4535 [Colwellia psychrerythraea 34H]
 gi|71147751|gb|AAZ28224.1| putative membrane protein [Colwellia psychrerythraea 34H]
          Length = 258

 Score =  109 bits (272), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 120/215 (55%), Gaps = 1/215 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y VGV  + ++++     G V+A QG   L  +GAE     ++++  LRE+G ++
Sbjct: 42  LMQQLYSVGVLSLLIIVVSGTFIGMVLALQGYTILVGYGAEASLGPMVALSLLRELGPVV 101

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA  ISLPLL  + +
Sbjct: 102 AALLFAGRAGSALTAEIGLMKATEQLSSLEMMAIDPLRRVIAPRFWAGFISLPLLAAIFS 161

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334
              I+GA +V   +  +    F+S          +I  G+IK+   A  +  +A+ +G+ 
Sbjct: 162 MVGILGAHVVGVDWLGVDGGTFWSVMQDQVDFQKDILNGIIKSIVFAFVVMWIAVYKGYD 221

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               S  + +  T+ VVQS  +V+ +D +     F
Sbjct: 222 CEPTSEGISRATTSTVVQSSLLVLFLDFILTALMF 256


>gi|260596176|ref|YP_003208747.1| hypothetical protein CTU_03840 [Cronobacter turicensis z3032]
 gi|260215353|emb|CBA27350.1| UPF0393 inner membrane protein yrbE [Cronobacter turicensis z3032]
          Length = 262

 Score =  109 bits (272), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 140/265 (52%), Gaps = 12/265 (4%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           NL   +G++ +KF + S  +A   GL++ N         +F+     L+RQ+Y+VGV  +
Sbjct: 6   NLLASMGQRGLKF-SASFGRA---GLMLFNA---IVGKPEFRKHGPLLVRQLYHVGVLSM 58

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++I+     G V+  QG   L+ +GAE     L+++  LRE+G ++ A++ AGR+GSA+
Sbjct: 59  IIIIVSGLFIGMVLGLQGYLVLTTYGAETSLGMLVALSLLRELGPVVAALLFAGRAGSAL 118

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI--VI 286
            AEIG MK  E++ ++  M +D +R +ISPR WA +ISLPLLT++     + G S+  V 
Sbjct: 119 TAEIGLMKATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGVWGGSLVGVN 178

Query: 287 WKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
           WK  D  F  F+S          ++   LIK+   A  +  +A+  G+     S  + + 
Sbjct: 179 WKGIDAGF--FWSAMQDAVDWRMDLINCLIKSVVFAITVTWIALFNGYDAIPTSAGISRA 236

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV +   V+ +D +     F 
Sbjct: 237 TTRTVVHASLAVLGLDFVLTALMFG 261


>gi|86147572|ref|ZP_01065882.1| putative ABC superfamily transport protein [Vibrio sp. MED222]
 gi|85834611|gb|EAQ52759.1| putative ABC superfamily transport protein [Vibrio sp. MED222]
          Length = 259

 Score =  108 bits (271), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 73/224 (32%), Positives = 122/224 (54%), Gaps = 2/224 (0%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           K K F L L++Q Y VGV  + ++++     G V++ QG   L  +GAE     ++++  
Sbjct: 36  KLKNFPL-LVKQFYSVGVQSLAIILVSGLFIGMVLSLQGYVVLIDYGAEGNLGQMVALSL 94

Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267
           LRE+G ++TA++ AGR+GSA+ AEIG MK  E+I ++  M +D ++ +I+PR+WA +IS+
Sbjct: 95  LRELGPVVTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLKRIIAPRLWAGLISM 154

Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGI 326
           PLL ++     I GA +V   +  I    F+S   S+  L  +I   +IK    A  +  
Sbjct: 155 PLLAMIFMAVGIWGAQLVGVDWKGIDHGSFWSAMQSSVELGRDIGNSMIKCMVFAITVTW 214

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +A+  G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 215 IALFNGYDAVPTSEGISQATTRTVVHSSLAVLGLDFVLTALMFG 258


>gi|68249643|ref|YP_248755.1| ABC transporter permease [Haemophilus influenzae 86-028NP]
 gi|68057842|gb|AAX88095.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae 86-028NP]
 gi|309973443|gb|ADO96644.1| Phospholipid ABC transporter, permease component [Haemophilus
           influenzae R2846]
          Length = 261

 Score =  108 bits (271), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 121/207 (58%), Gaps = 1/207 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++QM+ +GV  + +++L     G V+  QG   L  F AE     L+++  LRE+G ++
Sbjct: 44  LVKQMHVLGVQSLLIILLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+P+L+IL  
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPILSILFI 163

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G+S+V   +  +    F+S   ++ + + +I  G IKA F A A+  +A+  G+ 
Sbjct: 164 AIGIWGSSLVGVDWKGVDSGSFWSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYD 223

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIID 361
               S  + +  T  VV +  +V+ +D
Sbjct: 224 CMPTSEGISQATTRTVVHASLVVLGLD 250


>gi|148828248|ref|YP_001293001.1| ABC transporter permease [Haemophilus influenzae PittGG]
 gi|148719490|gb|ABR00618.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae PittGG]
          Length = 261

 Score =  108 bits (271), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 120/207 (57%), Gaps = 1/207 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++QM+ +GV  + +++L     G V+  QG   L  F AE     L+++  LRE+G ++
Sbjct: 44  LVKQMHVLGVQSLLIILLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+P+L+IL  
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPILSILFI 163

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G S+V   +  +    F+S   ++ + + +I  G IKA F A A+  +A+  G+ 
Sbjct: 164 AIGIWGGSLVGVDWKGVDSGSFWSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYD 223

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIID 361
               S  + +  T  VV +  +V+ +D
Sbjct: 224 CMPTSEGISQATTRTVVHASLVVLGLD 250


>gi|146313264|ref|YP_001178338.1| hypothetical protein Ent638_3630 [Enterobacter sp. 638]
 gi|145320140|gb|ABP62287.1| protein of unknown function DUF140 [Enterobacter sp. 638]
          Length = 260

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/218 (34%), Positives = 118/218 (54%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y VGV  + ++I+     G V+  QG   L+ + AE     L+++  LRE+G ++
Sbjct: 44  LVRQLYNVGVLSMLIIIVSGLFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ AGR+GSA+ AEIG M+  E++ ++  M +D +R +ISPR WA +ISLPLLTIL  
Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTILFV 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
              I G S+  V WK  D  F  F+S       L  ++   LIK+   A  +  +A+  G
Sbjct: 164 AVGIWGGSLVGVQWKGIDAGF--FWSAMQDAVDLRMDLVNCLIKSVVFAFTVTWIALFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV S   V+ +D +     F 
Sbjct: 222 YDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|218885146|ref|YP_002434467.1| hypothetical protein DvMF_0038 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218756100|gb|ACL06999.1| protein of unknown function DUF140 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 381

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 105/181 (58%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++ M   G + +P+V LIS + G ++A  GA QL  FGA+I+   L++I  +R +G ++
Sbjct: 164 LLQFMSESGSAALPIVSLISMLVGLILAFVGAVQLRVFGAQIYVASLVAIAMVRVMGAIM 223

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           T + +AGR+G++  A +G+M++NEE+DA+ TMGL  V  L+ PR+ AL++ LPLLT+ A+
Sbjct: 224 TGITMAGRTGASYAAILGTMQVNEEVDALATMGLRPVEQLVLPRLLALVVMLPLLTVYAD 283

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              ++G  IV     D+    + +      +LAN++ G+         + +     G   
Sbjct: 284 LMGMLGGFIVGVFMLDLNPMEYLNATREALSLANLWIGITHGAVFGVVVALCGCYHGMRC 343

Query: 336 G 336
           G
Sbjct: 344 G 344


>gi|225848307|ref|YP_002728470.1| toluene tolerance protein Ttg2B [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225643396|gb|ACN98446.1| putative toluene tolerance protein Ttg2B [Sulfurihydrogenibium
           azorense Az-Fu1]
          Length = 247

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 115/215 (53%), Gaps = 2/215 (0%)

Query: 149 FKGF--LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206
           FK F  L  +++ M  +GV+   ++IL  F TG V+  +      +F AE     L+S+ 
Sbjct: 25  FKRFPKLKHILKYMEDIGVNAALLIILTGFFTGGVLVVETYPTFHKFNAEYLMGALVSLS 84

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
             RE+  +L A+++  RSGSAI A IG+M+I E+IDA+  M ++    L+SPR+ A ++ 
Sbjct: 85  LARELSPVLVALLVTARSGSAIAANIGTMRITEQIDALEVMAVNPYSYLVSPRLIAAVVM 144

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326
           +P LT+L+  S +IG        Y I   +++ +      L +IF GL KA      + I
Sbjct: 145 VPALTVLSYVSGVIGGYFTSVYIYGINEYMYWEKLKDFTELKDIFGGLYKAAVFGAVLTI 204

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           V    G+     +  +G+  TT VV +  +++I+D
Sbjct: 205 VTSYFGYITKGGAEGVGRSTTTAVVVASVLILILD 239


>gi|145627949|ref|ZP_01783750.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae 22.1-21]
 gi|145632451|ref|ZP_01788186.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae 3655]
 gi|145634244|ref|ZP_01789955.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae PittAA]
 gi|145636462|ref|ZP_01792130.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae PittHH]
 gi|145638100|ref|ZP_01793710.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae PittII]
 gi|148826300|ref|YP_001291053.1| ABC transporter permease [Haemophilus influenzae PittEE]
 gi|229843875|ref|ZP_04464016.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae 6P18H1]
 gi|229846118|ref|ZP_04466230.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae 7P49H1]
 gi|144979724|gb|EDJ89383.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae 22.1-21]
 gi|144987358|gb|EDJ93888.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae 3655]
 gi|145268688|gb|EDK08681.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae PittAA]
 gi|145270287|gb|EDK10222.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae PittHH]
 gi|145272429|gb|EDK12336.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae PittII]
 gi|148716460|gb|ABQ98670.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae PittEE]
 gi|229811122|gb|EEP46839.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae 7P49H1]
 gi|229812869|gb|EEP48557.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae 6P18H1]
 gi|301169827|emb|CBW29431.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Haemophilus influenzae 10810]
 gi|309751266|gb|ADO81250.1| Phospholipid ABC transporter, permease component [Haemophilus
           influenzae R2866]
          Length = 261

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 120/207 (57%), Gaps = 1/207 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++QM+ +GV  + +++L     G V+  QG   L  F AE     L+++  LRE+G ++
Sbjct: 44  LVKQMHVLGVQSLLIILLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+P+L+IL  
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPILSILFI 163

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G S+V   +  +    F+S   ++ + + +I  G IKA F A A+  +A+  G+ 
Sbjct: 164 AIGIWGGSLVGVDWKGVDSGSFWSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYD 223

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIID 361
               S  + +  T  VV +  +V+ +D
Sbjct: 224 CMPTSEGISQATTRTVVHASLVVLGLD 250


>gi|303327746|ref|ZP_07358186.1| thioredoxin family protein [Desulfovibrio sp. 3_1_syn3]
 gi|302862107|gb|EFL85041.1| thioredoxin family protein [Desulfovibrio sp. 3_1_syn3]
          Length = 267

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 117/216 (54%), Gaps = 5/216 (2%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           ++Q+Y +G   + V++LI    G V+  QG + L QFG+       +S+  +RE+G +LT
Sbjct: 50  LQQIYVIGYKSLFVILLIGIFCGMVLGLQGYYTLIQFGSVGMLGSAVSLTLIRELGPVLT 109

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A+M+ GR+GS++ AEIG M+I ++IDA+  M ++ +  L+SPR+ A +IS PLLT + + 
Sbjct: 110 AIMLTGRAGSSMAAEIGVMRITDQIDALDVMDINSLGYLVSPRLVAALISFPLLTAIFDV 169

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV- 335
             I+G  +       I    +F R  S+ T+ +I  G +KA      +  V   +G+   
Sbjct: 170 IGILGGYLTGVLMLGINEGAYFYRIASSVTMTDISGGFVKALVFGLLVTTVCCHQGYYTH 229

Query: 336 ----GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
                V   ++G   T+ VV S  +++  D +   F
Sbjct: 230 RRRDSVGPEAVGNATTSAVVISCVLILAADYVLTSF 265


>gi|251793143|ref|YP_003007871.1| ABC transporter permease [Aggregatibacter aphrophilus NJ8700]
 gi|247534538|gb|ACS97784.1| conserved ABC-type transport system protein, permease component
           [Aggregatibacter aphrophilus NJ8700]
          Length = 261

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 118/206 (57%), Gaps = 1/206 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I+Q++ +GV  + +++L     G V+  QG   L  F AE     L+++  LRE+G ++T
Sbjct: 45  IKQLHVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVT 104

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA II++P+L+I+   
Sbjct: 105 ALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGIIAMPILSIIFIA 164

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAV 335
             I G S+V   +  +    F+S   ++ T   +I  G IK+ F A A+  +A+  G+  
Sbjct: 165 IGIWGGSLVGVDWKGVDAGSFWSVMQNSVTWGHDILNGSIKSLFFAIAVVWIALFNGYDC 224

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361
              S  + K  T  VV +  +V+ +D
Sbjct: 225 IPTSEGISKATTRTVVHASLVVLGLD 250


>gi|312881882|ref|ZP_07741649.1| hypothetical protein VIBC2010_12694 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309370461|gb|EFP97946.1| hypothetical protein VIBC2010_12694 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 263

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 118/216 (54%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LIRQ+Y VGV  + +++L     G V++ QG   L  FGAE     ++++  LRE+G ++
Sbjct: 47  LIRQLYSVGVQSLLIIVLSGLFIGMVLSLQGYVILVDFGAEGALGQMVALSLLRELGPVV 106

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D ++ +I+PR WA +IS+P+L ++  
Sbjct: 107 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPMLAMIFM 166

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G  +V   +  I    F+S   ++  L  +I   LIK+   A  +  VA+  G+ 
Sbjct: 167 AVGIWGGQLVGVDWKGIDNGSFWSAMQASVELGQDIGNSLIKSMVFAFTVTWVALFNGYD 226

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV S   V+ +D +     F 
Sbjct: 227 AVPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 262


>gi|326795053|ref|YP_004312873.1| hypothetical protein Marme_1781 [Marinomonas mediterranea MMB-1]
 gi|326545817|gb|ADZ91037.1| protein of unknown function DUF140 [Marinomonas mediterranea MMB-1]
          Length = 260

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 122/207 (58%), Gaps = 1/207 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+ Q+Y VGV  + +VI+     G V+A QG   L++FG+E     L+++  LRE+G ++
Sbjct: 43  LVNQVYSVGVLSLVIVIVSGCFIGMVLALQGYTILAKFGSEQAVGQLLALSLLRELGPVV 102

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ +   MG+D +R +I+PR  A +I +PLL ++ +
Sbjct: 103 TALLFAGRAGSALTAEIGLMKATEQLSSYEMMGVDPLRRVIAPRFIAGMICMPLLCLIFS 162

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
            + I+G  +V   +  I    F+S    +     ++F G+IK+ F ACAI  +A+ +GF 
Sbjct: 163 ATGILGGMLVSVHWLGIYDGSFWSLMQQSVYFDIDVFNGIIKSIFFACAITWIAVYQGFE 222

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIID 361
               S  +GK  T  VV     V+ +D
Sbjct: 223 CDPTSEGIGKATTRTVVLGSLAVLFLD 249


>gi|229588433|ref|YP_002870552.1| putative ABC transporter membrane protein [Pseudomonas fluorescens
           SBW25]
 gi|229360299|emb|CAY47156.1| putative ABC transport system, membrane protein [Pseudomonas
           fluorescens SBW25]
          Length = 265

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 124/215 (57%), Gaps = 1/215 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           ++Q++ VGV  + ++++     G V+A QG   LS +G+E     ++++  LRE+G ++T
Sbjct: 49  VKQLHAVGVMSLVIIVVSGVFIGMVLALQGFNILSSYGSEQAVGQMVALTLLRELGPVVT 108

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  ISLPLLTI+ + 
Sbjct: 109 ALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLTIIFSV 168

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             I G S V   +  +    +++   ++ T   ++  G+IK+   A  +  +A+ +G+  
Sbjct: 169 VGIWGGSWVAVDWLGVYDGSYWANMQNSVTFTGDVLNGIIKSIVFAFVVTWIAVFQGYDC 228

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
              S  + +  T  VV +   V+ +D +     F 
Sbjct: 229 EPTSEGISRATTKTVVYASLAVLGLDFILTALMFG 263


>gi|261342639|ref|ZP_05970497.1| toluene tolerance ABC efflux transporter, permease [Enterobacter
           cancerogenus ATCC 35316]
 gi|288315287|gb|EFC54225.1| toluene tolerance ABC efflux transporter, permease [Enterobacter
           cancerogenus ATCC 35316]
          Length = 260

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/218 (34%), Positives = 118/218 (54%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y VGV  + ++I+     G V+  QG   L+ + AE     L+++  LRE+G ++
Sbjct: 44  LVRQLYNVGVLSMVIIIVSGLFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ AGR+GSA+ AEIG M+  E++ ++  M +D +R +ISPR WA +ISLPLLTIL  
Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTILFV 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
              I G S+  V WK  D  F  F+S       L  ++   LIK+   A  +  +A+  G
Sbjct: 164 AVGIWGGSLVGVHWKGIDAGF--FWSAMQDAIDLRMDLINCLIKSLVFAVTVTWIALFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV S   V+ +D +     F 
Sbjct: 222 YDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|260772164|ref|ZP_05881081.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           metschnikovii CIP 69.14]
 gi|260613031|gb|EEX38233.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           metschnikovii CIP 69.14]
          Length = 263

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 118/216 (54%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y VGV  + ++I+     G V++ QG   L  FGAE     ++++  LRE+G ++
Sbjct: 47  LMKQLYSVGVQSLAIIIVSGLFIGMVLSLQGYVILVDFGAETSLGQMVALSLLRELGPVV 106

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E+I ++  M +D ++ +I+PR+WA +IS+PLL ++  
Sbjct: 107 TALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLKRIIAPRLWAGLISMPLLAMIFM 166

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G  +V   +  I    F+S   S+  L  +I   +IK    A  +  +A+  G+ 
Sbjct: 167 AVGIWGGHLVGVDWKGIDQGSFWSVMQSSVELGRDIGNSVIKCVVFAITVTWIALFNGYD 226

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV S   V+ +D +     F 
Sbjct: 227 AIPTSEGISRATTRTVVHSSLAVLALDFVLTALMFG 262


>gi|330807561|ref|YP_004352023.1| putative ABC transporter, membrane protein [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327375669|gb|AEA67019.1| putative ABC transporter, membrane protein [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 265

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 124/216 (57%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q++ VGV  + ++++     G V+A QG   LS +G+E     ++++  LRE+G ++
Sbjct: 48  LVKQLHSVGVMSLVIIVVSGIFIGMVLALQGFNILSSYGSEQAVGQMVALTLLRELGPVV 107

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +I+PR+WA  ISLP+L I+ +
Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIIAPRLWAGFISLPVLAIIFS 167

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G S V   +  +    ++S   ++   L ++  G+IK+   A  +  +A+ +G+ 
Sbjct: 168 VVGIWGGSWVAVDWLGVYEGSYWSNMQNSVDFLDDVLNGVIKSAVFAFVVTWIAVFQGYD 227

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV +   V+ +D +     F 
Sbjct: 228 CEPTSEGISRATTKTVVYASLAVLGLDFILTALMFG 263


>gi|302036233|ref|YP_003796555.1| putative toluene efflux ABC transporter ATP-binding protein
           [Candidatus Nitrospira defluvii]
 gi|300604297|emb|CBK40629.1| ABC transporter, membrane component, putative ATP-dependent toluene
           efflux transporter [Candidatus Nitrospira defluvii]
          Length = 255

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 116/206 (56%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +++Q+ ++G     VV+L +  TG V+A QG + L +FG+E      +++  +RE+G +L
Sbjct: 42  IVKQLNFIGYKSTFVVVLTAVFTGMVLALQGHYTLRKFGSEAVLGSAVALSIIRELGPVL 101

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A+M+  R+GSA+ AEIG M+I E+IDA+ TM ++ ++ LI P++ A +I++PLL  L +
Sbjct: 102 AALMVTARAGSAMTAEIGIMRITEQIDALDTMAINPLQYLIGPKLVASLIAVPLLVALFD 161

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              I G  +V  +  +     ++S   S     +++ G++K+      I  V   +GF  
Sbjct: 162 VVGIYGGYVVGVQLLNGNEGAYWSSIESAVEWKDVYGGILKSISFGLLISWVCCYKGFHT 221

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361
              +  LG   T  VV S  ++++ D
Sbjct: 222 KHSAEGLGTATTEAVVLSAVLILVWD 247


>gi|293391911|ref|ZP_06636245.1| conserved ABC-type transport system protein, permease component
           [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290952445|gb|EFE02564.1| conserved ABC-type transport system protein, permease component
           [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 261

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 121/216 (56%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q++ +GV  + +++L     G V+  QG   L  F AE     L+++  LRE+G ++
Sbjct: 44  LIKQLHVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+ R WA +I++P+L+I+  
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIASRFWAGVIAMPILSIIFI 163

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G S+V   +  +    F+S   S+ T + +I  G IK+ F A A+  +A+  G+ 
Sbjct: 164 AIGIWGGSLVGVDWKGVDSGSFWSVMQSSVTWSHDILNGFIKSLFFAIAVVWIALFNGYD 223

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + K  T  VV +  +V+ +D +     F 
Sbjct: 224 CIPTSEGISKATTRTVVHASLVVLGLDFVLTTIMFG 259


>gi|212633565|ref|YP_002310090.1| hypothetical protein swp_0685 [Shewanella piezotolerans WP3]
 gi|212555049|gb|ACJ27503.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
          Length = 235

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 121/228 (53%), Gaps = 1/228 (0%)

Query: 144 ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203
           A   + K  L  L +Q+Y +GV  + ++++     G V+A QG   L  FG E     ++
Sbjct: 7   AHRPRLKKGLPLLTKQLYVIGVQSMVIILVSGLFIGMVLALQGYNILVGFGTEESLGPMV 66

Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263
           ++  LRE+G ++TA++ AGR+GSA+ AE+  MK  E++ ++  M +D +R +I+PR WA 
Sbjct: 67  ALSLLRELGPVVTALLFAGRAGSALTAELALMKSTEQLSSLEMMAVDPLRQIIAPRFWAG 126

Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMAC 322
           +ISLPLL ++     I G  IV  ++  I    F+S   S+     +I   +IK+   A 
Sbjct: 127 VISLPLLALMFTAIGIYGGHIVGVEWKGIDSGAFWSILQSSVEWRQDIVNCMIKSLLFAV 186

Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            +  +A+  G+ V  +   + +  T  VVQS   V+ +D L     F 
Sbjct: 187 VVTWIALYRGYHVIPNPEGISRATTQTVVQSSLAVLALDFLLTAMMFG 234


>gi|54310335|ref|YP_131355.1| hypothetical protein PBPRA3247 [Photobacterium profundum SS9]
 gi|46914776|emb|CAG21553.1| conserved hypothetical protein [Photobacterium profundum SS9]
          Length = 260

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 120/216 (55%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y VGV  + ++++     G V++ QG   L  FGAE     ++++  LRE+G ++
Sbjct: 44  LMKQLYSVGVLSIAIIMVSGLFIGMVLSLQGYIVLVDFGAETSLGQMVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+PLL+++ +
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRQVIAPRFWAGVISMPLLSMMFS 163

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G  +V   +  I +  F+S   ++  L  +I   LIK+   A  I  +A+  G+ 
Sbjct: 164 AVGIWGGQLVGVDWKGIDYGSFWSVMQASVELGEDIGNSLIKSVVFAITITWIAVFNGYD 223

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  +    T  VV +   V+ +D +     F 
Sbjct: 224 AVPTSEGISLATTRTVVNASLAVLGLDFVLTALMFG 259


>gi|94987489|ref|YP_595422.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731738|emb|CAJ55101.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 386

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 113/211 (53%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           R M   GV  +P+V LIS + G ++A  G  QL  FGAEI+   L++I   R +G ++T 
Sbjct: 171 RCMQQAGVEALPIVSLISLLVGLILAFVGVIQLRMFGAEIYVSSLVAIGMTRIMGAVMTG 230

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           V+++GR+G++  A IG+M +NEEIDA+ T G+     L+ PR+ AL    PLL + ++F 
Sbjct: 231 VILSGRTGASYAATIGTMNVNEEIDALMTFGIRPSDFLVMPRLIALTTMTPLLVVYSDFM 290

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            ++G  IV      I    + +       L N++ G+I        I I    +G   G 
Sbjct: 291 GMLGGFIVGVGVLGIEPLEYINFTQKGFALKNLWVGIIHGIAFGIIIAITGCYQGLNSGK 350

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +++++G   T+ VV SI  ++I  +   I +
Sbjct: 351 NASAVGLATTSAVVYSIVGIVIATACLTIIF 381


>gi|209694101|ref|YP_002262029.1| toluene tolerance protein Ttg2B [Aliivibrio salmonicida LFI1238]
 gi|208008052|emb|CAQ78191.1| toluene tolerance protein Ttg2B [Aliivibrio salmonicida LFI1238]
          Length = 264

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/232 (32%), Positives = 123/232 (53%), Gaps = 2/232 (0%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G   A     + F L L++Q+Y VGV  + ++++     G VI+ QG   L  +GAE   
Sbjct: 33  GAIIAKPQPVRMFPL-LLQQLYSVGVLSLVIIVVSGLFIGMVISLQGYVILVDYGAETSL 91

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
             L+S+  LRE+G ++TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR
Sbjct: 92  GQLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKTTEQLSSMEMMAIDPLRRIIAPR 151

Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAP 318
           +WA +IS+PLL ++     I G  IV  ++  I    F+S   ++  +  +I   LIK  
Sbjct: 152 LWAGVISMPLLAMIFMAVGIWGGQIVGVEWKGIDHGSFWSVMQASVDVRHDIVNSLIKCV 211

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             A  +  +A+  G+     S  +    T  VV S   V+ ID +     F 
Sbjct: 212 VFAFVVTWIALFNGYDATPTSEGISLATTRTVVHSSLAVLGIDFVLTALMFG 263


>gi|238023142|ref|ZP_04603568.1| hypothetical protein GCWU000324_03068 [Kingella oralis ATCC 51147]
 gi|237865525|gb|EEP66665.1| hypothetical protein GCWU000324_03068 [Kingella oralis ATCC 51147]
          Length = 257

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 119/215 (55%), Gaps = 3/215 (1%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215
           IRQMY+ GV  V ++ +     G VI  QG  QL++F  A++    + + L LRE+G +L
Sbjct: 43  IRQMYFSGVLSVLIIAVSGLFVGMVIGLQGYTQLAKFKSADVLGFMVAASL-LRELGPVL 101

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ A  +G A+ +EIG MK  E+++A+  M ++ V  +++PR WA ++S+PLL  + N
Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTEQLEAMDVMAVNPVARVVAPRFWAGVVSMPLLACIFN 161

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
            + I G  +V  ++  +   VF+S   +    + ++F GL K+     A+ ++A+ +GF 
Sbjct: 162 VAGIYGGYLVGVQWLGLDTGVFWSNMQNNIDWSYDVFNGLTKSLIFGSAVALIAVYQGFH 221

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               +  + +  T  VV S   V+ +D +   F F
Sbjct: 222 CTPTAEGILRASTRTVVSSALTVLALDFILTAFMF 256


>gi|167031981|ref|YP_001667212.1| hypothetical protein PputGB1_0966 [Pseudomonas putida GB-1]
 gi|166858469|gb|ABY96876.1| protein of unknown function DUF140 [Pseudomonas putida GB-1]
          Length = 265

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 123/216 (56%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L +Q+Y VGV  + +V++     G V+A QG   L+++G+E     ++++  LRE+G ++
Sbjct: 48  LTKQLYSVGVLSLAIVVVSGVFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVV 107

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  ISLPLL ++ +
Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFS 167

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G S V   +  +    F++   ++ +   ++  GL+K+   A     +A+ +G+ 
Sbjct: 168 VVGIWGGSWVAVDWLGVYEGSFWANMQNSVSFTDDVLNGLVKSLVFAFVTTWIAVFQGYD 227

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV +   V+ +D +     F 
Sbjct: 228 CEPTSEGISRATTKTVVYASLAVLGLDFILTALMFG 263


>gi|157963422|ref|YP_001503456.1| hypothetical protein Spea_3608 [Shewanella pealeana ATCC 700345]
 gi|157848422|gb|ABV88921.1| protein of unknown function DUF140 [Shewanella pealeana ATCC
           700345]
          Length = 261

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 119/216 (55%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y +GV  + ++I+     G V+A QG   L  FG E     ++++  LRE+G ++
Sbjct: 45  LLKQLYVIGVQSMVIIIVSGLFIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVV 104

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AE+G MK  E++ ++  M +D +R +I+PR WA +ISLPLL ++  
Sbjct: 105 TALLFAGRAGSALTAELGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVISLPLLALMFT 164

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G  +V  ++  I    F+S   ++     +I   +IK+   A  +  +A+  G+ 
Sbjct: 165 AVGIYGGHLVGVEWKGIDSGSFWSILQASVEWREDIVNCIIKSLLFAVVVTWIALYRGYH 224

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           V  +   + +  T  VVQS   V+ +D L     F 
Sbjct: 225 VIPNPEGISRATTQTVVQSSLAVLALDFLLTAVMFG 260


>gi|296104907|ref|YP_003615053.1| putative ABC transport system permease protein [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295059366|gb|ADF64104.1| putative ABC transport system permease protein [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 260

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/218 (34%), Positives = 118/218 (54%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y VGV  + ++I+     G V+  QG   L+ + AE     L+++  LRE+G ++
Sbjct: 44  LVRQLYNVGVLSMLIIIVSGLFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ AGR+GSA+ AEIG M+  E++ ++  M +D +R +ISPR WA +ISLPLLTIL  
Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTILFV 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
              I G S+  V WK  D  F  F+S       L  ++   LIK+   A  +  +A+  G
Sbjct: 164 AVGIWGGSLVGVHWKGIDAGF--FWSAMQDAIDLRMDLVNCLIKSVVFAITVTWIALFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV S   V+ +D +     F 
Sbjct: 222 YDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|148977765|ref|ZP_01814321.1| putative ABC superfamily transport protein [Vibrionales bacterium
           SWAT-3]
 gi|145962979|gb|EDK28249.1| putative ABC superfamily transport protein [Vibrionales bacterium
           SWAT-3]
          Length = 259

 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 122/224 (54%), Gaps = 2/224 (0%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           + K F L L++Q+Y VGV  + ++++     G V++ QG   L  +GAE     ++++  
Sbjct: 36  RLKNFPL-LVKQLYSVGVQSLAIILVSGLFIGMVLSLQGYVVLIDYGAEGNLGQMVALSL 94

Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267
           LRE+G ++TA++ AGR+GSA+ AEIG MK  E+I ++  M +D ++ +I+PR+WA +IS+
Sbjct: 95  LRELGPVVTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLKRIIAPRLWAGLISM 154

Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGI 326
           PLL ++     I G  +V   +  I    F+S   S+  L  +I   +IK    A  +  
Sbjct: 155 PLLAMIFMAVGIWGGQLVGVDWKGIDHGSFWSAMQSSVELGRDIGNSMIKCMVFAITVTW 214

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +A+  G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 215 IALFNGYDAVPTSEGISQATTRTVVHSSLAVLGLDFVLTALMFG 258


>gi|241758953|ref|ZP_04757065.1| ABC transport inner membrane subunit [Neisseria flavescens SK114]
 gi|241320774|gb|EER57007.1| ABC transport inner membrane subunit [Neisseria flavescens SK114]
          Length = 258

 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 120/215 (55%), Gaps = 3/215 (1%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215
           IRQ+Y+ GV  V +V +     G V+  QG  QL++F  A+I    + + L LRE+G +L
Sbjct: 43  IRQVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLAKFKSADILGYMVAASL-LRELGPVL 101

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ A  +G A+ +EIG MK  E+++A+  M +D V  +++PR WA + S+PLL  + N
Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVDPVARVVAPRFWAGVFSMPLLASIFN 161

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
            + I GA +V  ++  +   +F+S+  +  T   ++  GLIK+     A+ ++A+ +GF 
Sbjct: 162 VAGIYGAYLVGVEWLGLDGGIFWSQMQNNITFHYDVLNGLIKSAAFGVAVTLIAVHQGFH 221

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               S  + +  T  VV S   ++ +D +   + F
Sbjct: 222 CVPTSEGILRASTRTVVSSALTILAVDFMLTAWMF 256


>gi|4336799|gb|AAD17958.1| toluene tolerance protein Ttg2B [Pseudomonas putida]
          Length = 265

 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 123/216 (56%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L +Q+Y VGV  + ++++     G V+A QG   L+++G+E     ++++  LRE+G ++
Sbjct: 48  LTKQLYSVGVLSLAIIVVSGVFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVV 107

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  ISLPLL ++ +
Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFS 167

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G S V   +  +    F++   ++ +   ++  GLIK+   A     +A+ +G+ 
Sbjct: 168 VVGIWGGSWVAVDWLGVYEGSFWANMQNSVSFTDDVLNGLIKSLVFAFVTTWIAVFQGYD 227

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV +   V+ +D +     F 
Sbjct: 228 CEPTSEGISRATTKTVVYASLAVLGLDFILTALMFG 263


>gi|260914439|ref|ZP_05920908.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Pasteurella dagmatis ATCC
           43325]
 gi|260631540|gb|EEX49722.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Pasteurella dagmatis ATCC
           43325]
          Length = 260

 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 118/216 (54%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q++ +GV  + +++L     G V+  QG   L  F AE     L+++  LRE+G ++
Sbjct: 43  LVKQLHVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVV 102

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+P+L ++  
Sbjct: 103 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPILAVIFT 162

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G S+V   +  +    F+S   +  T   ++  G IK+   A A+  +A+  G+ 
Sbjct: 163 AIGIWGGSLVGVDWKGVDSGSFWSVMQNAVTWEKDLLNGFIKSLCFAIAVVWIALFNGYD 222

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + K  T  VV +  +V+ +D +     F 
Sbjct: 223 CLPTSEGISKATTRTVVHASLVVLGLDFVLTALMFG 258


>gi|329113573|ref|ZP_08242353.1| Putative ABC transporter permease protein [Acetobacter pomorum
           DM001]
 gi|326697095|gb|EGE48756.1| Putative ABC transporter permease protein [Acetobacter pomorum
           DM001]
          Length = 385

 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 121/230 (52%), Gaps = 6/230 (2%)

Query: 145 SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204
           S+ + K  LL +    +  G   + +V +++F+ GA++A  G  +L +F AEI+  DL+ 
Sbjct: 161 SAMRMKDLLLDI----WNAGPDALLIVGIVNFLVGAILAFVGLVELRKFAAEIYVTDLVG 216

Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264
           I   REI  ++TA+++AGR+G A  A I +M  NEEIDA++  G+     ++ P I +L 
Sbjct: 217 IACAREISAIMTAIIMAGRTGGAYAARISTMLGNEEIDALQVFGIPISSYILLPSIVSLA 276

Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDI-PFAVFFSRFHSTATLANIFTGLIKAPFMACA 323
           + +PLL +     AI G   V     D+ P   + S F        IF G IK+ F A  
Sbjct: 277 LMMPLLYLYGTIVAIFGGFAVSMSMMDVSPIGYWISTFDGVELKEFIF-GFIKSFFFASF 335

Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           I + A + G   G  +  +G   T  VV  I  +I +D++FA+   A+GI
Sbjct: 336 IALAACRVGLKAGRSAADVGIAATRAVVIGIVGIIAMDAIFAVIANALGI 385


>gi|148546241|ref|YP_001266343.1| hypothetical protein Pput_0998 [Pseudomonas putida F1]
 gi|148510299|gb|ABQ77159.1| protein of unknown function DUF140 [Pseudomonas putida F1]
          Length = 265

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 123/216 (56%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L +Q+Y VGV  + +V++     G V+A QG   L+++G+E     ++++  LRE+G ++
Sbjct: 48  LTKQLYSVGVLSLAIVVVSGVFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVV 107

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  ISLPLL ++ +
Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFS 167

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G S V   +  +    F++   ++ +   ++  GL+K+   A     +A+ +G+ 
Sbjct: 168 VVGIWGGSWVAVDWLGVYEGSFWANMQNSVSFTDDVLNGLVKSLVFAFVSTWIAVFQGYD 227

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV +   V+ +D +     F 
Sbjct: 228 CEPTSEGISRATTKTVVYASLAVLGLDFILTALMFG 263


>gi|18149137|dbj|BAB83590.1| toluene resistance protein Trg1 [Pseudomonas putida]
 gi|269200089|gb|ACZ28672.1| Ttg2B [Pseudomonas putida]
          Length = 265

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 123/216 (56%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L +Q+Y VGV  + +V++     G V+A QG   L+++G+E     ++++  LRE+G ++
Sbjct: 48  LTKQLYSVGVLSLAIVVVSGVFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVV 107

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  ISLPLL ++ +
Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFS 167

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G S V   +  +    F++   ++ +   ++  GL+K+   A     +A+ +G+ 
Sbjct: 168 VVGIWGGSWVAVDWLGVYEGSFWANMQNSVSFTDDVLNGLVKSVVFAFVSTWIAVFQGYD 227

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV +   V+ +D +     F 
Sbjct: 228 CEPTSEGISRATTKTVVYASLAVLGLDFILTALMFG 263


>gi|269960373|ref|ZP_06174747.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269834984|gb|EEZ89069.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 263

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 122/232 (52%), Gaps = 2/232 (0%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G         K F L LI+Q+Y VGV  + ++++     G V++ QG   L  +GAE   
Sbjct: 32  GALVTRPQPIKNFPL-LIKQLYSVGVQSLAIIVVSGLFIGMVLSLQGYVVLVDYGAEGSL 90

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
             ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK  E++ ++  M +D ++ +I+PR
Sbjct: 91  GQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLKRVIAPR 150

Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAP 318
            WA +IS+PLL ++     I GA IV   +  +    F++   S+  L  +I   +IK  
Sbjct: 151 FWAGVISMPLLAMIFMAVGIWGAQIVGVDWKGVDHGSFWAAMQSSVELGQDIGNSMIKCI 210

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             A  +  +A+  G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 211 VFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 262


>gi|258543490|ref|YP_003188923.1| ABC transporter permease [Acetobacter pasteurianus IFO 3283-01]
 gi|256634568|dbj|BAI00544.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-01]
 gi|256637626|dbj|BAI03595.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-03]
 gi|256640678|dbj|BAI06640.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-07]
 gi|256643735|dbj|BAI09690.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-22]
 gi|256646790|dbj|BAI12738.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-26]
 gi|256649843|dbj|BAI15784.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-32]
 gi|256652831|dbj|BAI18765.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256655887|dbj|BAI21814.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-12]
          Length = 385

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 121/230 (52%), Gaps = 6/230 (2%)

Query: 145 SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204
           S+ + K  LL +    +  G   + +V +++F+ GA++A  G  +L +F AEI+  DL+ 
Sbjct: 161 SAMRMKDLLLDI----WNAGPDALLIVGIVNFLVGAILAFVGLVELRKFAAEIYVTDLVG 216

Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264
           I   REI  ++TA+++AGR+G A  A I +M  NEEIDA++  G+     ++ P I +L 
Sbjct: 217 IACAREISAIMTAIIMAGRTGGAYAARISTMLGNEEIDALQVFGIPISSYILLPSIVSLA 276

Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDI-PFAVFFSRFHSTATLANIFTGLIKAPFMACA 323
           + +PLL +     AI G   V     D+ P   + S F        IF G IK+ F A  
Sbjct: 277 LMMPLLYLYGTIVAIFGGFAVSMSMMDVSPIGYWISTFDGVELKEFIF-GFIKSFFFASF 335

Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           I + A + G   G  +  +G   T  VV  I  +I +D++FA+   A+GI
Sbjct: 336 IALAACRVGLKAGRSAADVGVAATRAVVIGIVGIIAMDAIFAVIANALGI 385


>gi|261379496|ref|ZP_05984069.1| toluene tolerance ABC efflux transporter, permease [Neisseria
           subflava NJ9703]
 gi|319638901|ref|ZP_07993659.1| ABC transport inner membrane subunit [Neisseria mucosa C102]
 gi|284797959|gb|EFC53306.1| toluene tolerance ABC efflux transporter, permease [Neisseria
           subflava NJ9703]
 gi|317399805|gb|EFV80468.1| ABC transport inner membrane subunit [Neisseria mucosa C102]
          Length = 258

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 120/215 (55%), Gaps = 3/215 (1%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215
           IRQ+Y+ GV  V +V +     G V+  QG  QL++F  A+I    + + L LRE+G +L
Sbjct: 43  IRQIYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLAKFKSADILGYMVAASL-LRELGPVL 101

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ A  +G A+ +EIG MK  E+++A+  M +D V  +++PR WA + S+PLL  + N
Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVDPVARVVAPRFWAGVFSMPLLASIFN 161

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
            + I GA +V  ++  +   +F+S+  +  T   ++  GLIK+     A+ ++A+ +GF 
Sbjct: 162 VAGIYGAYLVGVEWLGLDGGIFWSQMQNNITFHYDVLNGLIKSAAFGVAVTLIAVHQGFH 221

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               S  + +  T  VV S   ++ +D +   + F
Sbjct: 222 CVPTSEGILRASTRTVVSSALTILAVDFILTAWMF 256


>gi|322420104|ref|YP_004199327.1| hypothetical protein GM18_2600 [Geobacter sp. M18]
 gi|320126491|gb|ADW14051.1| protein of unknown function DUF140 [Geobacter sp. M18]
          Length = 258

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 114/209 (54%), Gaps = 2/209 (0%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           S++ QM  +G   +PV  +++F  G V+A Q   +L ++G +     ++    +RE+G +
Sbjct: 42  SILAQMAIIGWDTLPVASVMAFFVGMVLALQTGVELQKYGGQNIIGAIVGHSMVRELGPV 101

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +T+ ++AGR GSA+ AE+G M + EEIDA++T+ +D VR L  PR  A II +P L I A
Sbjct: 102 MTSFLVAGRCGSAMAAELGVMTVYEEIDALKTLDIDPVRYLAMPRFIACIICVPALVIYA 161

Query: 275 NFSAIIGASIV--IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           +   I G +++  +     + +A ++    +   +  I  GL K+      I +V+   G
Sbjct: 162 DLIGITGGALISNLHPQIFVSYATYYDSLTAALKMKEIGIGLTKSMVFGAIIALVSCYVG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           FA    +  +G+  T  VV S  +++I D
Sbjct: 222 FATSGGARGIGQSTTRSVVLSFMLILIAD 250


>gi|295097681|emb|CBK86771.1| conserved hypothetical integral membrane protein [Enterobacter
           cloacae subsp. cloacae NCTC 9394]
          Length = 260

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 118/218 (54%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y VGV  + ++I+     G V+  QG   L+ + AE     L+++  LRE+G ++
Sbjct: 44  LVRQLYNVGVLSMLIIIVSGLFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ AGR+GSA+ AEIG M+  E++ ++  M +D +R +ISPR WA +ISLPLLTIL  
Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTILFV 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
              I G ++  V WK  D  F  F+S       L  ++   LIK+   A  +  +A+  G
Sbjct: 164 AVGIWGGALVGVNWKGIDAGF--FWSAMQDAIDLRMDLVNCLIKSVVFAVTVTWIALFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV S   V+ +D +     F 
Sbjct: 222 YDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|15602040|ref|NP_245112.1| hypothetical protein PM0175 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12720395|gb|AAK02259.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 261

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 118/216 (54%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q++ +GV  + +++L     G V+  QG   L  F AE     L+++  LRE+G ++
Sbjct: 43  LIKQLHVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVV 102

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +I++P+L I+  
Sbjct: 103 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPILAIIFT 162

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G S+V   +  +    F+S   +  T   ++  G IK+   A A+  +A+  G+ 
Sbjct: 163 AIGIWGGSLVGVDWKGVDAGSFWSVMQNAVTWEKDLLNGFIKSLCFAIAVVWIALFNGYD 222

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + K  T  VV +  +V+ +D +     F 
Sbjct: 223 CIPTSEGISKATTRTVVHASLVVLGLDFVLTALMFG 258


>gi|313497328|gb|ADR58694.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
          Length = 265

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 123/216 (56%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L +Q+Y VGV  + +V++     G V+A QG   L+++G+E     ++++  LRE+G ++
Sbjct: 48  LTKQLYSVGVLSLAIVVVSGVFIGMVLALQGYSILAKYGSEQAVGQMVALTLLRELGPVV 107

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  ISLPLL ++ +
Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFS 167

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G S V   +  +    F++   ++ +   ++  GL+K+   A     +A+ +G+ 
Sbjct: 168 VVGIWGGSWVAVDWLGVYEGSFWANMQNSVSFTDDVLNGLVKSLVFAFVSTWIAVFQGYD 227

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV +   V+ +D +     F 
Sbjct: 228 CEPTSEGISRATTKTVVYASLAVLGLDFILTALMFG 263


>gi|26987695|ref|NP_743120.1| hypothetical protein PP_0959 [Pseudomonas putida KT2440]
 gi|24982381|gb|AAN66584.1|AE016286_8 toluene tolerance ABC efflux transporter, permease [Pseudomonas
           putida KT2440]
          Length = 266

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 123/216 (56%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L +Q+Y VGV  + +V++     G V+A QG   L+++G+E     ++++  LRE+G ++
Sbjct: 49  LTKQLYSVGVLSLAIVVVSGVFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVV 108

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  ISLPLL ++ +
Sbjct: 109 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFS 168

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G S V   +  +    F++   ++ +   ++  GL+K+   A     +A+ +G+ 
Sbjct: 169 VVGIWGGSWVAVDWLGVYEGSFWANMQNSVSFTDDVLNGLVKSVVFAFVSTWIAVFQGYD 228

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV +   V+ +D +     F 
Sbjct: 229 CEPTSEGISRATTKTVVYASLAVLGLDFILTALMFG 264


>gi|225077106|ref|ZP_03720305.1| hypothetical protein NEIFLAOT_02159 [Neisseria flavescens
           NRL30031/H210]
 gi|224951663|gb|EEG32872.1| hypothetical protein NEIFLAOT_02159 [Neisseria flavescens
           NRL30031/H210]
          Length = 258

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 120/215 (55%), Gaps = 3/215 (1%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215
           IRQ+Y+ GV  V +V +     G V+  QG  QL++F  A++    + + L LRE+G +L
Sbjct: 43  IRQVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLAKFKSADVLGYMVAASL-LRELGPVL 101

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ A  +G A+ +EIG MK  E+++A+  M +D V  +++PR WA + S+PLL  + N
Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVDPVARVVAPRFWAGVFSMPLLASIFN 161

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
            + I GA +V  ++  +   +F+S+  +  T   ++  GLIK+     A+ ++A+ +GF 
Sbjct: 162 VAGIYGAYLVGVEWLGLDGGIFWSQMQNNITFHYDVLNGLIKSAAFGVAVTLIAVHQGFH 221

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               S  + +  T  VV S   ++ +D +   + F
Sbjct: 222 CVSTSEGILRASTRTVVSSSLTILAVDFMLTAWMF 256


>gi|145297399|ref|YP_001140240.1| ABC-type transporter, permease subunit [Aeromonas salmonicida
           subsp. salmonicida A449]
 gi|142850171|gb|ABO88492.1| ABC-type transporter, permease subunit [Aeromonas salmonicida
           subsp. salmonicida A449]
          Length = 259

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 113/207 (54%), Gaps = 1/207 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y VGV  V ++++     G V++ QG   L  FGAE     L+S+  LRE+G ++
Sbjct: 44  LLQQLYVVGVQSVAIILVSGLFIGMVLSLQGYNVLKDFGAEQSLGPLVSLSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           T ++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +++PR WA +IS+PLL  + +
Sbjct: 104 TGLLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLAFMFS 163

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G  +V      +    F+S   ++     +I  G IK+   A  +  +A+  G+ 
Sbjct: 164 LIGIFGGKLVGVDLLGVDEGSFWSAMQASVDWQDDIMQGAIKSLIFALVVTWIALFNGYD 223

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIID 361
               S  + +  T  VV S   V+ +D
Sbjct: 224 AKPTSAGISQATTRTVVHSSLAVLGLD 250


>gi|254468843|ref|ZP_05082249.1| ABC-type transporter, permease component involved in toluene
           tolerance [beta proteobacterium KB13]
 gi|207087653|gb|EDZ64936.1| ABC-type transporter, permease component involved in toluene
           tolerance [beta proteobacterium KB13]
          Length = 259

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 125/228 (54%), Gaps = 2/228 (0%)

Query: 145 SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204
           SS  FK F L+ IR++Y+ GV  + ++++ +F  G V+  QG + L ++G+      L++
Sbjct: 33  SSDSFKRFNLT-IREIYFTGVLSLVIIVVSAFFVGMVLGLQGYYTLQKYGSSEAIGVLVA 91

Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264
           +  +RE+G ++TA++ AGR+G+AI AEIG MK  E++ A+  M +  +  +++PR WA I
Sbjct: 92  LALVRELGPVVTALLFAGRAGTAITAEIGLMKATEQLSAMEMMAVSPIARIVAPRFWAGI 151

Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACA 323
           I++PLL  + +   I+G  +V      +    F+S+  +      +I  G IK+     A
Sbjct: 152 ITMPLLASIFSMVGILGGYVVAVPMIGVDEGAFWSQMQANVDFNYDIVNGFIKSVVFGIA 211

Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
             I+A+ EG+     +  + +  T  VV S   V+ +D +   F   +
Sbjct: 212 CTIIALFEGYDAPPTAEGVSRATTRTVVTSSLAVLGLDFVLTSFMLTV 259


>gi|313896753|ref|ZP_07830301.1| putative membrane protein [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|320530066|ref|ZP_08031136.1| hypothetical protein HMPREF9555_01216 [Selenomonas artemidis F0399]
 gi|312974670|gb|EFR40137.1| putative membrane protein [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|320137499|gb|EFW29411.1| hypothetical protein HMPREF9555_01216 [Selenomonas artemidis F0399]
          Length = 255

 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 113/215 (52%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           S++ QM ++G   + +V L    TG V+  Q A +  ++GA+     +++I   RE+G +
Sbjct: 41  SIVYQMSHLGADSLLIVGLTLLFTGVVLTLQTAHEFIRYGAQSTIGAVIAISIGRELGPV 100

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           L  V+ AGR G+AI AE+ +MK+ E+IDA+R M +  V  LI PR+ A +  +P+LT+  
Sbjct: 101 LVGVVCAGRVGAAITAEVSTMKVTEQIDALRVMAVSPVNYLIVPRMLACMCVVPILTVFG 160

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
           +   + G  +    Y  I    F       AT+ ++  GLIKA F    I ++    G A
Sbjct: 161 DVIGVFGGYLTAVHYSGISAYTFTHSITQFATIYDLTGGLIKAIFFGNVIAVLGCHYGLA 220

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               +  +GK     VV SI ++ I++++   F F
Sbjct: 221 APNGAEGVGKATMQTVVTSIIVIFILNAVLTFFLF 255


>gi|193214677|ref|YP_001995876.1| hypothetical protein Ctha_0964 [Chloroherpeton thalassium ATCC
           35110]
 gi|193088154|gb|ACF13429.1| protein of unknown function DUF140 [Chloroherpeton thalassium ATCC
           35110]
          Length = 248

 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 111/214 (51%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           ++ QM ++GV  +P+V+L+S  TGA+ A Q A+Q+           + S + + E+G +L
Sbjct: 35  VLAQMSHIGVDSLPLVLLVSIFTGAIAAWQAAYQMKGLAPLSLVGGITSRVIIIELGPVL 94

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           T ++IAGR G++I AE+G+MK+ E+IDA+  M +   R L  PRI A  I +P+L I AN
Sbjct: 95  TGIIIAGRVGASIAAELGTMKVTEQIDALEIMAISPSRYLAMPRILATTIMMPVLVIFAN 154

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             AI+GA IV   +  I   VFF    +     ++   L+K+        +     GF  
Sbjct: 155 IIAIVGAFIVSNMFLGISKQVFFDSLKTFFYTGDVVGALVKSGIFGLMTSLAGCHIGFRT 214

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              +  +G       V S ++++I D     F F
Sbjct: 215 DGGAEGVGISTIRSFVVSSAMILIADYFLWFFLF 248


>gi|70728304|ref|YP_258053.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas
           fluorescens Pf-5]
 gi|68342603|gb|AAY90209.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas
           fluorescens Pf-5]
          Length = 265

 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 125/216 (57%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q++ VGV  + ++++     G V+A QG   LS +G+E     ++++  LRE+G ++
Sbjct: 48  LVKQLHSVGVMSLVIIVVSGIFIGMVLALQGFNILSSYGSEQAVGQMVALTLLRELGPVV 107

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +I+PR+WA  ISLPLL ++ +
Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIIAPRLWAGFISLPLLAMIFS 167

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G S V   +  +    +++   ++ T + ++  G+IK+   A  +  +A+ +G+ 
Sbjct: 168 VVGIWGGSWVAVDWLGVYDGSYWANMQNSVTFSGDVLNGVIKSIVFAFVVTWIAVFQGYD 227

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV +   V+ +D +     F 
Sbjct: 228 CEPTSEGISRATTKTVVYASLAVLGLDFILTALMFG 263


>gi|229527546|ref|ZP_04416938.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae 12129(1)]
 gi|229335178|gb|EEO00663.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae 12129(1)]
          Length = 263

 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 117/216 (54%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y +GV  + ++I+     G V++ QG   L  +GAEI    ++++  LRE+G ++
Sbjct: 47  LVRQLYSIGVQSLAIIIVSGLFIGMVLSLQGYVILVDYGAEISLGQMVALSLLRELGPVV 106

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D ++ +I+PR WA +IS+PLL ++  
Sbjct: 107 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFM 166

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G  +V   +  I    F+S   ++  L  +I    IK    A  +  +A+  G+ 
Sbjct: 167 AVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYD 226

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV S   V+ +D +     F 
Sbjct: 227 AIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 262


>gi|301060804|ref|ZP_07201619.1| conserved hypothetical protein [delta proteobacterium NaphS2]
 gi|300445201|gb|EFK09151.1| conserved hypothetical protein [delta proteobacterium NaphS2]
          Length = 258

 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 116/209 (55%), Gaps = 4/209 (1%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           ++Q+ ++G   + +++L    +G ++  QG + LS+FG++ F   ++ +  ++E+G ++ 
Sbjct: 42  LKQIRFIGFQSLLLILLTGAFSGMILGFQGFYSLSRFGSDAFLGPMVGLALIKELGPVIA 101

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A+M+ GR+GSAI AEIG M+I+E+IDA+  MGL+  R L+ P + A +I LPLLT + + 
Sbjct: 102 ALMVTGRAGSAITAEIGIMRISEQIDALELMGLNPYRYLVVPNLLAAVICLPLLTAIFDV 161

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
             I G  ++  +   +    +F        + ++  G+ K+      I  V   +GF  G
Sbjct: 162 VGIFGGYLIGGELLGVGAGTYFGEMAHYVEMKDVLEGIYKSFSFGVIIAWVCCFKGFYSG 221

Query: 337 VH----SNSLGKKVTTCVVQSISIVIIID 361
           ++    S  + K  T  VV S  ++++ D
Sbjct: 222 IYTGFGSEGVSKATTQAVVLSSVLILVWD 250


>gi|225024503|ref|ZP_03713695.1| hypothetical protein EIKCOROL_01378 [Eikenella corrodens ATCC
           23834]
 gi|224942654|gb|EEG23863.1| hypothetical protein EIKCOROL_01378 [Eikenella corrodens ATCC
           23834]
          Length = 258

 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 132/256 (51%), Gaps = 12/256 (4%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL-IRQMYYVGVSG 167
           N    +G K + F+ +       L  V++ +G             L L IRQ+Y+ GV  
Sbjct: 2   NFFRTLGAKTLDFLQELGKTTLFLFAVLARSGTLLPR--------LQLGIRQIYFTGVLS 53

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
           + ++ +     G V+  QG  QL++F  A+I    + + L LRE+G +L  ++ A  +G 
Sbjct: 54  IVIIAVSGLFVGMVLGLQGYTQLAKFKSADILGYMVAASL-LRELGPVLAGILFASSAGG 112

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ +EIG MK  E+++A++ M +D V  ++ PR WA +IS+PLL  + N + I GA ++ 
Sbjct: 113 AMTSEIGLMKTTEQLEAMKVMAVDPVARVVVPRFWAGVISMPLLASICNVAGIYGAYLIG 172

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
            +Y  +   +F+S+  +   +  ++  GLIK+     AI ++A+ +GF        + + 
Sbjct: 173 VRYLGLDGGIFWSQMQANIDVGYDVVNGLIKSVVFGVAISLIAVYQGFHCRSTPEGILRA 232

Query: 346 VTTCVVQSISIVIIID 361
            T  VV S   V+ +D
Sbjct: 233 STRTVVSSALTVLALD 248


>gi|308189078|ref|YP_003933209.1| ABC transport system, permease protein yrbE [Pantoea vagans C9-1]
 gi|308059588|gb|ADO11760.1| Putative ABC transport system, permease protein yrbE [Pantoea
           vagans C9-1]
          Length = 260

 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 119/218 (54%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q+Y VGV  + ++++     G V+  QG   L+ +GAE     L+++  LRE+G ++
Sbjct: 44  LIKQLYSVGVLSLLIIVVSGLFIGMVLGLQGYLVLTTYGAETSLGMLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R ++SPR WA  IS+PLLT++  
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVVSPRFWAGFISMPLLTMIFT 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
              I G ++  V WK  D  F  F+S   +      ++   +IK+   A  +  +A+  G
Sbjct: 164 AVGIAGGALVGVSWKGIDPGF--FWSAMQNAVDFRTDVVNCIIKSAVFAVTVTWIALFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV +   V+ +D +     F 
Sbjct: 222 YDAIPTSEGISRATTRTVVHASLAVLGLDFVLTALMFG 259


>gi|301155764|emb|CBW15232.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Haemophilus parainfluenzae T3T1]
          Length = 261

 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 121/218 (55%), Gaps = 1/218 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y +GV  + +++L     G V+  QG   L  F AE     L+++  LRE+G ++
Sbjct: 44  LVKQLYALGVQSLLIILLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +I++P+L IL  
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPILAILFT 163

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G S+V   +  +    F+S   +  + + +I  G IK+ F A A+  +A+  G+ 
Sbjct: 164 AIGIWGGSLVGVDWKGVDAGSFWSVMQNAVSWSYDILNGFIKSVFFAIAVVWIALFNGYD 223

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
               S  + +  T  VV +  +V+ +D +     F  G
Sbjct: 224 CIPTSEGISQATTRTVVHASLVVLGLDFILTAIMFGAG 261


>gi|91225579|ref|ZP_01260653.1| putative ABC superfamily transport protein [Vibrio alginolyticus
           12G01]
 gi|269967998|ref|ZP_06182036.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|91189699|gb|EAS75973.1| putative ABC superfamily transport protein [Vibrio alginolyticus
           12G01]
 gi|269827355|gb|EEZ81651.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 263

 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 128/246 (52%), Gaps = 11/246 (4%)

Query: 136 ISNTGEFCASSYKFKGFLLS----------LIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
           +S  G F  +++   G L S          L++Q+Y VGV  + ++++     G V++ Q
Sbjct: 17  LSICGAFGRATFMLIGALFSKPQPIRSFPLLVKQLYSVGVQSLAIIVVSGLFIGMVLSLQ 76

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           G   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK  E++ ++ 
Sbjct: 77  GYVVLVDYGAEGSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLE 136

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            M +D ++ +I+PR WA +IS+PLL ++     I GA +V   +  +    F+S   S+ 
Sbjct: 137 MMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGAQLVGVDWKGVDHGSFWSAMQSSV 196

Query: 306 TLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            L  +I   +IK    A  +  VA+  G+     S  + +  T  VV S   V+ +D + 
Sbjct: 197 ELGQDIGNSMIKCFAFAITVTWVALFNGYDAIPTSEGISRATTRTVVHSSLAVLGLDFVL 256

Query: 365 AIFYFA 370
               F 
Sbjct: 257 TALMFG 262


>gi|255658873|ref|ZP_05404282.1| toluene tolerance ABC efflux transporter, permease [Mitsuokella
           multacida DSM 20544]
 gi|260848821|gb|EEX68828.1| toluene tolerance ABC efflux transporter, permease [Mitsuokella
           multacida DSM 20544]
          Length = 256

 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 127/238 (53%), Gaps = 1/238 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG ++   GE    + + K  L  ++ QM ++GV  + +V L    TG VI+ Q A  L 
Sbjct: 20  LGTIVLLYGE-TLRALRHKPRLRHILAQMSHLGVDSLMIVSLTLLFTGVVISLQTADVLI 78

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           +FGA+     +++I   RE+G +L AV+ AGR GSAI AEI +MK+ E+IDA+R M +  
Sbjct: 79  RFGAQGTLGGIVTIAIGRELGPVLVAVVCAGRVGSAITAEIATMKVTEQIDALRVMAVSP 138

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A +I +P+LT+  +   + G  ++   Y  +    + +  H  A L ++ 
Sbjct: 139 VDYLLVPRMLACMIVVPILTVFGDVIGVFGGWLIAVFYKGLTTYSYMNSIHIFADLFDMT 198

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
            G+IKA F    I ++    G      +  +G+  T  VV SI ++ +++++     +
Sbjct: 199 GGVIKAIFFGNVIAVLGCYYGLHCPDGAEGVGRATTKTVVASIIVIFLLNAVLTFLLY 256


>gi|170723417|ref|YP_001751105.1| hypothetical protein PputW619_4256 [Pseudomonas putida W619]
 gi|169761420|gb|ACA74736.1| protein of unknown function DUF140 [Pseudomonas putida W619]
          Length = 265

 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 122/216 (56%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L +Q+Y VGV  + +V +     G V+A QG   L+++G+E     ++++  LRE+G ++
Sbjct: 48  LTKQLYSVGVLSLAIVAVSGVFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVV 107

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  ISLPLL ++ +
Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFS 167

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G S V   +  +    F++   ++ +   ++  GL+K+   A     +A+ +G+ 
Sbjct: 168 VVGIWGGSWVAVDWLGVYEGSFWANMQNSVSFTDDVLNGLVKSLVFAFVTTWIAVFQGYD 227

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV +   V+ +D +     F 
Sbjct: 228 CEPTSEGISRATTKTVVYASLAVLGLDFILTALMFG 263


>gi|304396326|ref|ZP_07378207.1| protein of unknown function DUF140 [Pantoea sp. aB]
 gi|304355835|gb|EFM20201.1| protein of unknown function DUF140 [Pantoea sp. aB]
          Length = 260

 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 119/218 (54%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q+Y VGV  + ++++     G V+  QG   L+ +GAE     L+++  LRE+G ++
Sbjct: 44  LIKQLYSVGVLSLLIIVVSGLFIGMVLGLQGYLVLNTYGAETSLGMLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R ++SPR WA  IS+PLLT++  
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVVSPRFWAGFISMPLLTMIFT 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
              I G ++  V WK  D  F  F+S   +      ++   +IK+   A  +  +A+  G
Sbjct: 164 AVGIAGGALVGVSWKGIDPGF--FWSAMQNAVDFRTDVVNCIIKSAVFAVTVTWIALFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV +   V+ +D +     F 
Sbjct: 222 YDAIPTSEGISRATTRTVVHASLAVLGLDFVLTALMFG 259


>gi|330721190|gb|EGG99301.1| Uncharacterized ABC transporter2C permease component YrbE [gamma
           proteobacterium IMCC2047]
          Length = 225

 Score =  106 bits (265), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 124/213 (58%), Gaps = 2/213 (0%)

Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209
           KG  L L++Q+Y VGV  +P++I+     G V++ QG   L  +G+E     ++S+  +R
Sbjct: 3   KGLPL-LLKQLYAVGVLSLPIIIVSGLFIGMVMSLQGYSILVDYGSEQAVGQMVSLSLVR 61

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
           E+G ++TA++ AGR+GS++ AEIG MK  E+I ++  +G+D +R +++PR+ A  I+LPL
Sbjct: 62  ELGPVVTALLFAGRAGSSLTAEIGLMKATEQITSLEMLGVDPLRYVMAPRLLAGFIALPL 121

Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVA 328
           LT++ N   I G ++V   +  +    F++   +      ++  G++K+   A  +  +A
Sbjct: 122 LTLIFNVVGIWGGALVAVDWLGVYDGSFWANMQAATDFRTDVVNGMVKSIAFAFVVTWIA 181

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           + +G  +   S  +G+  T  VV S   V+ +D
Sbjct: 182 VFQGHDLTPTSEGIGRATTKTVVYSSLAVLGLD 214


>gi|149178242|ref|ZP_01856835.1| probable permease of ABC transporter [Planctomyces maris DSM 8797]
 gi|148842891|gb|EDL57261.1| probable permease of ABC transporter [Planctomyces maris DSM 8797]
          Length = 280

 Score =  106 bits (265), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 121/218 (55%), Gaps = 12/218 (5%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQG--AFQLSQFGAEIFSIDLMSILQLREIG 212
           +L   MY++G+  +PV+++     G V+A Q    F+L     +I ++  +S+++  E+G
Sbjct: 51  NLWSCMYHIGIQSIPVILITGGFIGMVLAVQSYDQFKLMHLENQIGAVIAISLVE--ELG 108

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            +L A+M+AGR G+++ AE+G+M++ E+IDA+R +G D +  L+ PR  A  + +PLLTI
Sbjct: 109 PVLAAIMLAGRVGTSMSAELGTMRVTEQIDALRALGADPIHYLVVPRFLACCLLIPLLTI 168

Query: 273 LANFSAIIGASIVIWKYYDIPFAV-FFSRFHSTATLA---NIFTGLIKAPFMACAIGIVA 328
           +A+   I+G     W +      V  F  +H +       ++  G+ K+ F   AI +++
Sbjct: 169 VADAVGILGG----WFFSTQILGVDSFYYWHYSEQFVYAYDVMGGIFKSFFFGAAISLIS 224

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
              GF  G  +  +GK  T   V S  +++I+D L  +
Sbjct: 225 CHRGFHCGAGAEGVGKAATEAFVYSFIVIMILDFLLGV 262


>gi|237809666|ref|YP_002894106.1| hypothetical protein Tola_2931 [Tolumonas auensis DSM 9187]
 gi|237501927|gb|ACQ94520.1| protein of unknown function DUF140 [Tolumonas auensis DSM 9187]
          Length = 259

 Score =  106 bits (265), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 117/207 (56%), Gaps = 1/207 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q+Y VGV  V ++++     G V+  QG   L  FGAE     L+++  LRE+G ++
Sbjct: 44  LIQQLYVVGVESVLIILVSGLFIGMVLGFQGYRVLVDFGAEASLGPLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           +A++ AGR+GSA+ AEIG MK  E++ ++  M +D +R ++SPR WA  ISLPLL+++  
Sbjct: 104 SALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRIVSPRFWAGAISLPLLSLIFC 163

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334
           F  IIG  +V   +       F+S   ++     +I  G+IK+   A  +  VA+  G+ 
Sbjct: 164 FIGIIGGKLVGVDWLGADEGGFWSAMQASVDWQEDIVQGIIKSVAFALVVTWVALFNGYD 223

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIID 361
               +  + +  T  VV +  +V+ +D
Sbjct: 224 SLPTAAGISQATTRTVVHASLLVLGLD 250


>gi|256422329|ref|YP_003122982.1| hypothetical protein Cpin_3314 [Chitinophaga pinensis DSM 2588]
 gi|256037237|gb|ACU60781.1| protein of unknown function DUF140 [Chitinophaga pinensis DSM 2588]
          Length = 245

 Score =  106 bits (265), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 125/234 (53%)

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
            I+G  +  TG F  + ++        IRQ + VG   V +V +  F+ G V+  Q    
Sbjct: 2   EIVGDQVLFTGRFARNIFRGGFEWGEFIRQCFIVGYLSVGLVGITGFIIGLVMTLQTQPT 61

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L  FGAE +   ++SI  +REIG ++ A++ AG+  S+I AE+GSMK+ E+IDA+     
Sbjct: 62  LKDFGAESYVPGMVSISIIREIGPVIIALICAGKIASSIGAELGSMKVTEQIDAMEVSAA 121

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
           + V+ L+  RI A  I +PLLTI+A+  A++G  + +     +   +FF +       ++
Sbjct: 122 NPVQYLVVTRILACTIMVPLLTIMADGLAMLGGWVGVNIQDHVSATLFFKKSFKALEFSD 181

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
           +   +IK  F   AIG V   +G+     + S+GK   + VV +   +I+ID++
Sbjct: 182 VVPSVIKTFFFGYAIGFVGCYKGYHSARGTESVGKAANSAVVSASLWIILIDAI 235


>gi|253997969|ref|YP_003050032.1| hypothetical protein Msip34_0256 [Methylovorus sp. SIP3-4]
 gi|253984648|gb|ACT49505.1| protein of unknown function DUF140 [Methylovorus sp. SIP3-4]
          Length = 263

 Score =  106 bits (265), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 120/212 (56%), Gaps = 1/212 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           IR++Y+ GV  + ++++ +F  G V+A QG   L ++G+      L+++  +RE+G ++T
Sbjct: 48  IREIYFTGVMSLLIILVSAFFVGMVLALQGYNTLQKYGSSEAIGVLVALSLVRELGPVVT 107

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+G+AI AEIG MK  E++ A+  M +  +  +++PR WA ++S+PLL  L + 
Sbjct: 108 ALLFAGRAGTAITAEIGLMKTTEQLSAMEMMAVSPIARVVAPRFWAGVVSMPLLAALFSM 167

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             ++G  +V      +    F+S+  ++    A+I  G+IK+     A  ++A+ EGF  
Sbjct: 168 VGVLGGYLVAVPVIGVDNGAFWSQMQASVDFQADIVNGVIKSVVFGVACTMIALFEGFDA 227

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
              +  + +  T  VV S   V+ +D +   F
Sbjct: 228 PPTAEGVSRATTRTVVNSSLAVLGLDFILTSF 259


>gi|163803754|ref|ZP_02197611.1| putative ABC superfamily transport protein [Vibrio sp. AND4]
 gi|159172438|gb|EDP57307.1| putative ABC superfamily transport protein [Vibrio sp. AND4]
          Length = 263

 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 118/216 (54%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q+Y VGV  + ++I+     G V++ QG   L  +GAE     ++++  LRE+G ++
Sbjct: 47  LIKQLYSVGVQSLAIIIVSGLFIGMVLSLQGYIVLVDYGAEGSLGQMVALSLLRELGPVV 106

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D ++ +I+PR WA  IS+PLL ++  
Sbjct: 107 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGAISMPLLAMIFM 166

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I GA +V   +  + +  F++   S+  L  +I   +IK    A  +  +A+  G+ 
Sbjct: 167 AVGIWGAQLVGVDWKGVDYGSFWAAMQSSVELGQDIGNSMIKCIVFAITVTWIALFNGYD 226

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV S   V+ +D +     F 
Sbjct: 227 AIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 262


>gi|32474659|ref|NP_867653.1| ABC transporter permease [Rhodopirellula baltica SH 1]
 gi|32445198|emb|CAD75200.1| probable permease of ABC transporter [Rhodopirellula baltica SH 1]
          Length = 296

 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 6/210 (2%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           +++   Y VGV  +PVV L     G V+A Q  +Q    G E     +++   +RE+G +
Sbjct: 68  TVLVNFYQVGVLSLPVVALTGSFIGMVLAVQSYYQFHTIGLETHLGVVINTSLVRELGPV 127

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           L A M+AGR G A+ A +G+M++ E+IDA+ TMG D +  L+ PR  A ++ +P LTI+A
Sbjct: 128 LAATMLAGRVGGAMAAVLGTMRVTEQIDALTTMGADPIHYLVVPRFMACLLLIPALTIVA 187

Query: 275 NFSAIIGA---SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
           +F  I+G    S++I     I  A +           ++F G+ K+ F    I I++   
Sbjct: 188 DFMGIVGGYFYSVII---LGIDRAAYLHHSREGVVAFDLFNGIFKSIFFGGVIAIISCYR 244

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           GF     +  +GK  T   V S  +++ ID
Sbjct: 245 GFNCQPGAEGVGKAATEAFVYSFVMILAID 274


>gi|108761216|ref|YP_628530.1| putative ABC transporter permease [Myxococcus xanthus DK 1622]
 gi|108465096|gb|ABF90281.1| putative ABC transporter, permease protein [Myxococcus xanthus DK
           1622]
          Length = 250

 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 112/206 (54%), Gaps = 3/206 (1%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGV 213
            L+     +GV  +P+ +L +   G VI+ Q  + LS+FG + +++  + IL L RE+  
Sbjct: 34  GLVYHTESLGVRSLPIALLTAMFAGLVISLQFGYFLSRFGVQ-YTVGRVVILTLFRELAP 92

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           +LTA+ +  R GS I AE+G+M + E++DAIR +G D +R L+ PR+ A +I LP+LT+ 
Sbjct: 93  VLTALTVGARIGSGIAAELGAMTVTEQVDAIRALGADPLRKLVVPRVLACLIVLPVLTVF 152

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
           A+   ++  ++V+   Y I   +FF        + +  +G+ K       IG+V    G 
Sbjct: 153 ADVVGLVAGALVVNIQYAITLNLFFQGALDAVLMPDFASGVFKGAVFGLIIGLVGCFRGL 212

Query: 334 AVGVHSNSLGKKVT-TCVVQSISIVI 358
            V   +  +G+  T T    S+S+ +
Sbjct: 213 TVEGGTEGVGRATTQTVATTSVSVCL 238


>gi|330432403|gb|AEC17462.1| conserved hypothetical protein [Gallibacterium anatis UMN179]
          Length = 261

 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 118/215 (54%), Gaps = 1/215 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           ++Q+Y +GV  + +++L     G V+  QG   L  F AE     L+++  LRE+G ++T
Sbjct: 45  VKQLYVLGVQSLLIIVLSGLFIGMVLGLQGYVILVDFSAETSLGQLVALSLLRELGPVVT 104

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+GSA+ AEIG MK  E++  +  M ++ +R +I+PR WA +I++PLL ++   
Sbjct: 105 ALLFAGRAGSALTAEIGLMKATEQLSGLEMMAVNPLRRVIAPRFWAGMIAMPLLALIFTA 164

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAV 335
             I G S+V   +  +    F+S   S+     +I  G+IK+   A ++  +A+  G+  
Sbjct: 165 VGIWGGSLVGVDWKGVDGGSFWSVMQSSVVWGKDIGNGIIKSLCFALSVVWIALFNGYNA 224

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
              S  + +  T  VVQ+  +V+ +D +     F 
Sbjct: 225 LPTSEGISQATTKTVVQASLVVLALDFILTALMFG 259


>gi|332163079|ref|YP_004299656.1| hypothetical protein YE105_C3459 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325667309|gb|ADZ43953.1| hypothetical protein YE105_C3459 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330862752|emb|CBX72894.1| UPF0393 inner membrane protein yrbE [Yersinia enterocolitica
           W22703]
          Length = 260

 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 118/218 (54%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y VGV  + ++++     G V+  QG   L+ + AE     ++S+  LRE+G ++
Sbjct: 44  LVKQLYSVGVQSLLIIVVSGLFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E+I ++  M +D +R +++PR WA +IS+PLLT +  
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFV 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
              I G S+  V WK  D  F  F+S   S      ++   LIK+   A  +  +A+  G
Sbjct: 164 AVGIWGGSVVGVDWKGIDGGF--FWSAMQSAVEWRTDLLNCLIKSLVFAVTVTWIALFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV S   V+ +D +     F 
Sbjct: 222 YDAVPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|297172194|gb|ADI23174.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [uncultured gamma
           proteobacterium HF0770_11A05]
          Length = 220

 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 118/209 (56%), Gaps = 3/209 (1%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + Q++++GV    VV+L    TG V+  Q   Q  +   +   + + ++   RE+G + T
Sbjct: 1   MEQLHFIGVKSQSVVLLTGAFTGMVMCAQFYIQFHKVKMDSAVMSVXTVXMXRELGAVXT 60

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA-N 275
            +MIAGR G+A+ A++G+MK+ E+IDA+RT+    V  L++PR+ A++ISLPLLT  A  
Sbjct: 61  XLMIAGRVGAAMAAQLGTMKVTEQIDALRTLATSPVDYLVAPRLLAMLISLPLLTAEAIA 120

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
            S + G  + ++     P  ++ +    T ++ +I+ GLIKA   A  I  VA  +G   
Sbjct: 121 ISMVSGMLVAVYLLGLDPVFLWSNMVFYTGSV-DIWMGLIKAFIFAGIIATVACHKGMHC 179

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           G  +  +GK  T  VV + SI I++ + F
Sbjct: 180 GQGAEGVGKATTEAVVAA-SISILVSNFF 207


>gi|313200036|ref|YP_004038694.1| hypothetical protein MPQ_0269 [Methylovorus sp. MP688]
 gi|312439352|gb|ADQ83458.1| conserved hypothetical protein [Methylovorus sp. MP688]
          Length = 259

 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 120/212 (56%), Gaps = 1/212 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           IR++Y+ GV  + ++++ +F  G V+A QG   L ++G+      L+++  +RE+G ++T
Sbjct: 44  IREIYFTGVMSLLIILVSAFFVGMVLALQGYNTLQKYGSSEAIGVLVALSLVRELGPVVT 103

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+G+AI AEIG MK  E++ A+  M +  +  +++PR WA ++S+PLL  L + 
Sbjct: 104 ALLFAGRAGTAITAEIGLMKTTEQLSAMEMMAVSPIARVVAPRFWAGVVSMPLLAALFSM 163

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             ++G  +V      +    F+S+  ++    A+I  G+IK+     A  ++A+ EGF  
Sbjct: 164 VGVLGGYLVAVPVIGVDNGAFWSQMQASVDFQADIVNGVIKSVVFGVACTMIALFEGFDA 223

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
              +  + +  T  VV S   V+ +D +   F
Sbjct: 224 PPTAEGVSRATTRTVVNSSLAVLGLDFILTSF 255


>gi|327540665|gb|EGF27237.1| ABC transporter permease protein [Rhodopirellula baltica WH47]
          Length = 296

 Score =  106 bits (264), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 6/210 (2%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           +++   Y VGV  +PVV L     G V+A Q  +Q    G E     +++   +RE+G +
Sbjct: 68  TVLVNFYQVGVLSLPVVALTGSFIGMVLAVQSYYQFHTIGLETHLGVVINTSLVRELGPV 127

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           L A M+AGR G A+ A +G+M++ E+IDA+ TMG D +  L+ PR  A ++ +P LTI+A
Sbjct: 128 LAATMLAGRVGGAMAAVLGTMRVTEQIDALTTMGADPIHYLVVPRFMACLLLIPALTIVA 187

Query: 275 NFSAIIGA---SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
           +F  I+G    S++I     I  A +           ++F G+ K+ F    I I++   
Sbjct: 188 DFMGIVGGYFYSVII---LGIDRAAYLHHSREGVVAFDLFNGIFKSIFFGGVIAIISCYR 244

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           GF     +  +GK  T   V S  +++ ID
Sbjct: 245 GFNCQPGAEGVGKAATEAFVYSFVMILAID 274


>gi|238764271|ref|ZP_04625223.1| hypothetical protein ykris0001_25370 [Yersinia kristensenii ATCC
           33638]
 gi|238697552|gb|EEP90317.1| hypothetical protein ykris0001_25370 [Yersinia kristensenii ATCC
           33638]
          Length = 260

 Score =  106 bits (264), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 118/218 (54%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y VGV  + ++++     G V+  QG   L+ + AE     ++S+  LRE+G ++
Sbjct: 44  LVKQLYSVGVQSLLIIVVSGLFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E+I ++  M +D +R +++PR WA +IS+PLLT +  
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFV 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
              I G S+  V WK  D  F  F+S   S      ++   LIK+   A  +  +A+  G
Sbjct: 164 AVGIWGGSVVGVDWKGIDSGF--FWSAMQSAVEWRTDLLNCLIKSLVFAITVTWIALFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV S   V+ +D +     F 
Sbjct: 222 YDAVPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|163783076|ref|ZP_02178071.1| hypothetical protein HG1285_00835 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881756|gb|EDP75265.1| hypothetical protein HG1285_00835 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 248

 Score =  106 bits (264), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 111/205 (54%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I Q  Y+      VV++ S  TG VIA Q      +F AE     ++++   RE+G +LT
Sbjct: 36  IDQFTYIAAETSLVVLVTSTFTGGVIALQTYSTFHRFNAEYLIGAVVALSMGRELGPVLT 95

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           ++M+  R GSA+ A IG+M+I ++IDA+  M ++ VR L++PRI+A  + +PLLTI++N 
Sbjct: 96  SLMVVARVGSAMTANIGTMRITQQIDALEVMAVNPVRYLVTPRIFATTVGVPLLTIVSNV 155

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           + + G  +V  K + +   +++ +        +I  GL KA      I  V+   GF   
Sbjct: 156 AGMFGGWLVATKLFKVNEYLYWQKMIDLTEFYDIVGGLYKAFVFGFIIAAVSCYFGFYTR 215

Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361
             +  +G+  T  VV +  +++I D
Sbjct: 216 GGTEGVGRSTTNSVVTASMLILITD 240


>gi|292486812|ref|YP_003529682.1| hypothetical protein EAMY_0324 [Erwinia amylovora CFBP1430]
 gi|292900790|ref|YP_003540159.1| membrane protein [Erwinia amylovora ATCC 49946]
 gi|291200638|emb|CBJ47770.1| putative membrane protein [Erwinia amylovora ATCC 49946]
 gi|291552229|emb|CBA19266.1| UPF0393 inner membrane protein yrbE [Erwinia amylovora CFBP1430]
 gi|312170880|emb|CBX79139.1| UPF0393 inner membrane protein yrbE [Erwinia amylovora ATCC
           BAA-2158]
          Length = 260

 Score =  106 bits (264), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 118/217 (54%), Gaps = 3/217 (1%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           L++Q+Y +GV  + +V++     G V+  QG   L  +GAE  S+ +M  L L RE+G +
Sbjct: 44  LVKQLYSIGVLSLLIVVVSGLFIGMVLGLQGYLVLKTYGAEA-SLGMMVALSLLRELGPV 102

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +ISPR WA  IS+PLLT++ 
Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRIISPRFWAGFISMPLLTLIF 162

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGF 333
               I+G ++V   +  I    F+S   +   L  +I    IK+   A  +  +A+  G+
Sbjct: 163 VAVGILGGTLVGVSWKGIDPGYFWSAMQNAVDLQTDIINCTIKSAVFALTVTWIALFNGY 222

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                S  + +  T  VV +   V+ +D +     F 
Sbjct: 223 DAIPTSEGISRATTRTVVHASLAVLGLDFVLTALMFG 259


>gi|148263316|ref|YP_001230022.1| hypothetical protein Gura_1245 [Geobacter uraniireducens Rf4]
 gi|146396816|gb|ABQ25449.1| protein of unknown function DUF140 [Geobacter uraniireducens Rf4]
          Length = 257

 Score =  106 bits (264), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 120/222 (54%), Gaps = 6/222 (2%)

Query: 143 CASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDL 202
            +  Y ++ F      Q+  +GV  + +VIL    TG V+A Q   QL  F A  +   +
Sbjct: 32  VSPPYYYRDF----TTQLDKIGVGSLFIVILTGLFTGMVMALQALIQLKPFAATSYVGGM 87

Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
           +++  ++E+G +L+A+M+ GR GSAI AEIG+M + E+IDA+R  G D V+ L++ R+ A
Sbjct: 88  VAVTMIKELGPVLSALMVTGRVGSAITAEIGTMVVTEQIDAMRVEGTDIVKRLVTSRLKA 147

Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322
           +++++PLLTI+ +  +++G  I +   YD+   +++          ++  G+ K  F   
Sbjct: 148 ILVAMPLLTIITDAISLLGGYI-MSASYDMNPIMYWKSIPQFMVFQDLIEGVAKPAFFGF 206

Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            I ++    GF     +  +G      VV S S++I++   F
Sbjct: 207 VIAMIGCHVGFNTRGGAEGVGASAKRAVVIS-SVIILVSDFF 247


>gi|78222008|ref|YP_383755.1| hypothetical protein Gmet_0788 [Geobacter metallireducens GS-15]
 gi|78193263|gb|ABB31030.1| protein of unknown function DUF140 [Geobacter metallireducens
           GS-15]
          Length = 257

 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 99/160 (61%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q++++G   + V+ L +  TG V+  QG + L++FG+E      +++  +RE+G +LTA
Sbjct: 46  KQIHFIGTKSLFVITLTASFTGMVLGLQGYYTLAKFGSEGMLGSAVALSLIRELGPVLTA 105

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +M+ GR+GSAI AEIG MKI E+IDA++TM L+  + LISP+I   ++++PLL  + +  
Sbjct: 106 LMVVGRAGSAITAEIGIMKITEQIDAMKTMALEPFKYLISPKIVGALVAVPLLCAIFDVV 165

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
            I G  +V  K   +    +F     +    ++++G +K+
Sbjct: 166 GIYGGYLVGVKLLGVNPGAYFHEMERSVEWKDVWSGFVKS 205


>gi|22124065|ref|NP_667488.1| hypothetical protein y0145 [Yersinia pestis KIM 10]
 gi|45443560|ref|NP_995099.1| hypothetical protein YP_3829 [Yersinia pestis biovar Microtus str.
           91001]
 gi|51597810|ref|YP_072001.1| ABC transporter, permease subunit, toluene tolerance protein
           [Yersinia pseudotuberculosis IP 32953]
 gi|108809720|ref|YP_653636.1| hypothetical protein YPA_3729 [Yersinia pestis Antiqua]
 gi|108813616|ref|YP_649383.1| hypothetical protein YPN_3456 [Yersinia pestis Nepal516]
 gi|145597639|ref|YP_001161715.1| hypothetical protein YPDSF_0323 [Yersinia pestis Pestoides F]
 gi|153950379|ref|YP_001399442.1| ABC transporter permease [Yersinia pseudotuberculosis IP 31758]
 gi|153997349|ref|ZP_02022449.1| putative membrane protein [Yersinia pestis CA88-4125]
 gi|162419182|ref|YP_001605691.1| hypothetical protein YpAngola_A1145 [Yersinia pestis Angola]
 gi|165928109|ref|ZP_02223941.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165937439|ref|ZP_02226002.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166011407|ref|ZP_02232305.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166212216|ref|ZP_02238251.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167400680|ref|ZP_02306189.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167420726|ref|ZP_02312479.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167426982|ref|ZP_02318735.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167470182|ref|ZP_02334886.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           FV-1]
 gi|170022764|ref|YP_001719269.1| hypothetical protein YPK_0513 [Yersinia pseudotuberculosis YPIII]
 gi|186897002|ref|YP_001874114.1| hypothetical protein YPTS_3704 [Yersinia pseudotuberculosis PB1/+]
 gi|218930586|ref|YP_002348461.1| hypothetical protein YPO3574 [Yersinia pestis CO92]
 gi|229836870|ref|ZP_04457035.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis Pestoides A]
 gi|229839230|ref|ZP_04459389.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229899795|ref|ZP_04514936.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229904110|ref|ZP_04519221.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis Nepal516]
 gi|270488545|ref|ZP_06205619.1| conserved hypothetical protein [Yersinia pestis KIM D27]
 gi|294505304|ref|YP_003569366.1| hypothetical protein YPZ3_3195 [Yersinia pestis Z176003]
 gi|21956812|gb|AAM83739.1|AE013614_13 hypothetical protein y0145 [Yersinia pestis KIM 10]
 gi|45438429|gb|AAS63976.1| putative membrane protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|51591092|emb|CAH22756.1| ABC transporter, permease subunit, toluene tolerance protein
           [Yersinia pseudotuberculosis IP 32953]
 gi|108777264|gb|ABG19783.1| membrane protein [Yersinia pestis Nepal516]
 gi|108781633|gb|ABG15691.1| putative membrane protein [Yersinia pestis Antiqua]
 gi|115349197|emb|CAL22162.1| putative membrane protein [Yersinia pestis CO92]
 gi|145209335|gb|ABP38742.1| membrane protein [Yersinia pestis Pestoides F]
 gi|149288986|gb|EDM39066.1| putative membrane protein [Yersinia pestis CA88-4125]
 gi|152961874|gb|ABS49335.1| putative ABC transporter, permease protein YrbE [Yersinia
           pseudotuberculosis IP 31758]
 gi|162351997|gb|ABX85945.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           Angola]
 gi|165914544|gb|EDR33158.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165919883|gb|EDR37184.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165989791|gb|EDR42092.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166206962|gb|EDR51442.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166961532|gb|EDR57553.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167050048|gb|EDR61456.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167054022|gb|EDR63850.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|169749298|gb|ACA66816.1| protein of unknown function DUF140 [Yersinia pseudotuberculosis
           YPIII]
 gi|186700028|gb|ACC90657.1| protein of unknown function DUF140 [Yersinia pseudotuberculosis
           PB1/+]
 gi|229678228|gb|EEO74333.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis Nepal516]
 gi|229687287|gb|EEO79362.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229695596|gb|EEO85643.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229705813|gb|EEO91822.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis Pestoides A]
 gi|262363367|gb|ACY60088.1| hypothetical protein YPD4_3184 [Yersinia pestis D106004]
 gi|262367255|gb|ACY63812.1| hypothetical protein YPD8_3142 [Yersinia pestis D182038]
 gi|270337049|gb|EFA47826.1| conserved hypothetical protein [Yersinia pestis KIM D27]
 gi|294355763|gb|ADE66104.1| hypothetical protein YPZ3_3195 [Yersinia pestis Z176003]
 gi|320017116|gb|ADW00688.1| putative toluene transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 260

 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 118/218 (54%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q+Y VGV  + ++++     G V+  QG   L+ + AE     ++S+  LRE+G ++
Sbjct: 44  LIKQLYSVGVQSLLIIVVSGLFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E+I ++  M +D +R +++PR WA +IS+PLLT +  
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFV 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
              I G S+  V WK  D  F  F+S   +      ++   LIK+   A  +  +A+  G
Sbjct: 164 AVGIWGGSVVGVDWKGIDSGF--FWSAMQNAVEWRTDLLNCLIKSLVFALTVTWIALFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV S   V+ +D +     F 
Sbjct: 222 YDAVPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|84387816|ref|ZP_00990831.1| putative ABC superfamily transport protein [Vibrio splendidus
           12B01]
 gi|84377331|gb|EAP94199.1| putative ABC superfamily transport protein [Vibrio splendidus
           12B01]
          Length = 259

 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 121/224 (54%), Gaps = 2/224 (0%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           + K F L  ++Q+Y VGV  + ++++     G V++ QG   L  +GAE     ++++  
Sbjct: 36  RLKNFPL-FVKQLYSVGVQSLAIILVSGLFIGMVLSLQGYVVLIDYGAEGNLGQMVALSL 94

Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267
           LRE+G ++TA++ AGR+GSA+ AEIG MK  E+I ++  M +D ++ +I+PR+WA +IS+
Sbjct: 95  LRELGPVVTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLKRIIAPRLWAGLISM 154

Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGI 326
           PLL ++     I GA +V   +  I    F+S   S+  L  +I    IK    A  +  
Sbjct: 155 PLLAMIFMAVGIWGAQLVGVDWKGIDHGSFWSAMQSSVELGRDIGNSTIKCMVFAITVTW 214

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +A+  G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 215 IALFNGYDAVPTSEGISQATTRTVVHSSLAVLGLDFVLTALMFG 258


>gi|300718605|ref|YP_003743408.1| toluene tolerance ABC transporter, permease subunit [Erwinia
           billingiae Eb661]
 gi|299064441|emb|CAX61561.1| toluene tolerance ABC transporter, permease subunit [Erwinia
           billingiae Eb661]
          Length = 257

 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 124/226 (54%), Gaps = 5/226 (2%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           +F+     LI+Q+Y +GV  + +V++     G V+  QG   L+ +GA+     L+++  
Sbjct: 33  RFRKHAPLLIKQLYSIGVLSLLIVVVSGLFIGMVLGLQGYLVLNTYGADSSLGMLVALSL 92

Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267
           LRE+G ++TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +ISPR WA  IS+
Sbjct: 93  LRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRIISPRFWAGFISM 152

Query: 268 PLLTILANFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAI 324
           PLLT++     I+G +I  V WK  D  F  F+S   +   +  +I   +IK+   A  +
Sbjct: 153 PLLTLIFVAVGIMGGAIVGVSWKGIDSGF--FWSAMQNAVDVRTDILNCVIKSAVFAFTV 210

Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             +A+  G+     S  + +  T  VV +   V+ +D +     F 
Sbjct: 211 TWIALFNGYDAIPTSEGISRATTRTVVHASLAVLGLDFVLTALMFG 256


>gi|323491744|ref|ZP_08096921.1| hypothetical protein VIBR0546_01054 [Vibrio brasiliensis LMG 20546]
 gi|323314000|gb|EGA67087.1| hypothetical protein VIBR0546_01054 [Vibrio brasiliensis LMG 20546]
          Length = 262

 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 118/216 (54%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q+Y VGV  + +++L     G V++ QG   L  FGAE     ++++  LRE+G ++
Sbjct: 46  LIKQLYTVGVQSLIIIVLSGLFIGMVLSLQGYVILVDFGAEGALGQMVALSLLRELGPVV 105

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D ++ +I+PR WA +IS+PLL ++  
Sbjct: 106 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLKRVIAPRFWAGVISMPLLVMIFM 165

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G  +V   +  I    F+S   ++  L  +I   +IK+   A  +  +A+  G+ 
Sbjct: 166 AVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSMIKSIVFAITVTWIALFNGYD 225

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV S   V+ +D +     F 
Sbjct: 226 AIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 261


>gi|163784036|ref|ZP_02178993.1| hypothetical protein HG1285_11198 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880693|gb|EDP74240.1| hypothetical protein HG1285_11198 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 248

 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 111/206 (53%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +I+Q+  +G    P++I+  F TG V+  +      +F AE     L+S+   RE+  +L
Sbjct: 35  IIKQIAVIGADAAPLIIITGFFTGGVLVVETYPTFHKFNAEFLIGALVSLSLSRELSPVL 94

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A+++  RSGSA+ A IG+M+I E+IDA+  + ++ VR LI+PRI A +  +P LTIL+ 
Sbjct: 95  VALLVTARSGSAMAANIGTMRITEQIDALEVLAVNPVRYLIAPRIIASVFVVPSLTILSI 154

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
            S I G   V  + Y +   +F  +        +I  G+ K+      + IV+   G+  
Sbjct: 155 ASGIAGGYFVATELYSVNSFMFIEKMKDLTEFYDILGGIYKSIAFGVLLTIVSCYFGYVA 214

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361
              +  +G+  TT VV S  +++I+D
Sbjct: 215 KGGAEGVGRATTTAVVTSSVLILIVD 240


>gi|283788167|ref|YP_003368032.1| putative organic solvent tolerance protein [Citrobacter rodentium
           ICC168]
 gi|282951621|emb|CBG91321.1| putative organic solvent tolerance protein [Citrobacter rodentium
           ICC168]
          Length = 260

 Score =  106 bits (264), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 118/218 (54%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y VGV  + ++++     G V+  QG   L+ + AE     L+++  LRE+G ++
Sbjct: 44  LVRQLYNVGVLSMLIILVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ AGR+GSA+ AEIG M+  E++ ++  M +D +R +ISPR WA +ISLPLLTIL  
Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTILFV 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEG 332
              I G S+  V WK  D  F  F+S   +      ++   LIK+   A  +  +A+  G
Sbjct: 164 AVGIWGGSLVGVSWKGIDAGF--FWSAMQNAVDWRLDLVNCLIKSVVFAITVTWIALFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV S   V+ +D +     F 
Sbjct: 222 YDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|123443934|ref|YP_001007905.1| hypothetical protein YE3751 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122090895|emb|CAL13777.1| putative membrane protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 260

 Score =  106 bits (264), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 118/218 (54%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y VGV  + ++++     G V+  QG   L+ + AE     ++S+  LRE+G ++
Sbjct: 44  LVKQLYSVGVQSLLIIVVSGLFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E+I ++  M +D +R +++PR WA +IS+PLLT +  
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFV 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
              I G S+  V WK  D  F  F+S   S      ++   LIK+   A  +  +A+  G
Sbjct: 164 AVGIWGGSVVGVDWKGIDGGF--FWSAMQSAVEWRTDLLNCLIKSLVFAITVTWIALFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV S   V+ +D +     F 
Sbjct: 222 YDAVPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|121635620|ref|YP_975865.1| putative ABC transport inner membrane subunit [Neisseria
           meningitidis FAM18]
 gi|120867326|emb|CAM11097.1| putative ABC transport inner membrane subunit [Neisseria
           meningitidis FAM18]
 gi|325131371|gb|EGC54080.1| putative membrane protein [Neisseria meningitidis M6190]
 gi|325133423|gb|EGC56087.1| putative membrane protein [Neisseria meningitidis M13399]
 gi|325141491|gb|EGC63964.1| putative membrane protein [Neisseria meningitidis 961-5945]
 gi|325143674|gb|EGC65993.1| putative membrane protein [Neisseria meningitidis M01-240013]
 gi|325199054|gb|ADY94510.1| putative membrane protein [Neisseria meningitidis G2136]
 gi|325206870|gb|ADZ02323.1| putative membrane protein [Neisseria meningitidis M04-240196]
          Length = 258

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 120/215 (55%), Gaps = 3/215 (1%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215
           +RQ+Y+ GV  V +V +     G V+  QG  QLS+F  A+I    + + L LRE+G +L
Sbjct: 43  VRQVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASL-LRELGPVL 101

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ A  +G A+ +EIG MK  E+++A+  M ++ V  +++PR WA + S+PLL  + N
Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFN 161

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
            + I GA +V   +  +   +F+S+  +  T+  ++  GLIK+     A+ ++A+ +GF 
Sbjct: 162 VAGIFGAYLVGVSWLSLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFH 221

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               S  + +  T  VV S   ++ +D +   + F
Sbjct: 222 CVPTSEGILRASTRTVVSSALTILAVDFILTAWMF 256


>gi|261250143|ref|ZP_05942719.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           orientalis CIP 102891]
 gi|260939259|gb|EEX95245.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           orientalis CIP 102891]
          Length = 262

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 118/216 (54%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q+Y VGV  + +++L     G V++ QG   L  FGAE     ++++  LRE+G ++
Sbjct: 46  LIKQLYSVGVQSLIIIVLSGLFIGMVLSLQGYVILVDFGAEGALGQMVALSLLRELGPVV 105

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D ++ +I+PR WA +IS+P+L ++  
Sbjct: 106 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLKRVIAPRFWAGVISMPMLAMIFM 165

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G  +V   +  I    F+S   ++  L  +I   +IK+   A  +  +A+  G+ 
Sbjct: 166 AVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSMIKSVVFAITVTWIALFNGYD 225

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV S   V+ +D +     F 
Sbjct: 226 AIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 261


>gi|261378129|ref|ZP_05982702.1| toluene tolerance ABC efflux transporter, permease [Neisseria
           cinerea ATCC 14685]
 gi|269145589|gb|EEZ72007.1| toluene tolerance ABC efflux transporter, permease [Neisseria
           cinerea ATCC 14685]
          Length = 258

 Score =  105 bits (263), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 120/215 (55%), Gaps = 3/215 (1%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215
           +RQ+Y+ GV  V +V +     G V+  QG  QLS+F  A+I    + + L LRE+G +L
Sbjct: 43  VRQVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASL-LRELGPVL 101

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ A  +G A+ +EIG MK  E+++A+  M ++ V  +++PR WA + S+PLL  + N
Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFN 161

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
            + I GA +V   +  +   +F+S+  +  T+  ++  GLIK+     A+ ++A+ +GF 
Sbjct: 162 VAGIFGAYLVGVSWLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFH 221

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               S  + +  T  VV S   ++ ID +   + F
Sbjct: 222 CVPTSEGILRASTRTVVSSALTILAIDFVLTAWMF 256


>gi|206890273|ref|YP_002248716.1| toluene tolerance protein Ttg2B [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206742211|gb|ACI21268.1| toluene tolerance protein Ttg2B [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 256

 Score =  105 bits (263), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 119/221 (53%), Gaps = 4/221 (1%)

Query: 147 YKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206
           +KF+ FL    RQ+ + G   + VVI     +G V+A QG + L++FGAE     ++++ 
Sbjct: 38  FKFRNFL----RQVRFFGNKSMIVVIFTGAFSGMVLALQGYYALNKFGAEALLGPVVALS 93

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            +RE+G +L A+M+ GR+GSA+ AEIG M+I E+IDA+  M ++ ++ ++ P I A I++
Sbjct: 94  LIRELGPVLCALMVTGRAGSAVTAEIGIMRITEQIDALTVMAVNPMKYVVVPNILAGIVA 153

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326
            PLLT + +   I G  +V      +    +FS+      + +I  GL K+      +  
Sbjct: 154 FPLLTAVFDVIGIYGGYLVSVHALGLSEGTYFSQMELYVDMEDIRIGLYKSLSFGLLVTW 213

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           +    G+  G  +  + +  T  VV S  ++++ D +   F
Sbjct: 214 ICTFMGYTSGYGARGVSRATTNAVVLSSVVILLWDYMLGAF 254


>gi|225871870|ref|YP_002753324.1| transporter, putative ER-chloroplast lipid translocase (ECLT)
           family [Acidobacterium capsulatum ATCC 51196]
 gi|225792942|gb|ACO33032.1| transporter, putative ER-chloroplast lipid translocase (ECLT)
           family [Acidobacterium capsulatum ATCC 51196]
          Length = 259

 Score =  105 bits (263), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 110/203 (54%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           Q  Y+G+  +P+VIL  F TG V+A   A  L+QFGA   +  L+S+  ++E+G +LT++
Sbjct: 44  QADYIGIGSLPIVILTGFFTGGVLALNSASTLAQFGATAVTGQLVSLSMIKELGPVLTSL 103

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           M++GR+ S + +E+GSM + E++DA+R +G D ++ L+ PRI A +  +  LTI+++   
Sbjct: 104 MVSGRNASGMASELGSMIVTEQVDAMRALGTDPMKKLVMPRIVATVCMMFFLTIVSDAIG 163

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
            +G + V         + +F   +      ++F GLIK       I  +    G      
Sbjct: 164 TLGGAFVSGILLGQNTSQYFHTAYQALRYPDVFEGLIKPVIFGFIIATIGCFYGMKTRGG 223

Query: 339 SNSLGKKVTTCVVQSISIVIIID 361
           +  +G+  T  VV +  ++I  D
Sbjct: 224 TQGVGRSTTQAVVVASVLIIATD 246


>gi|312959004|ref|ZP_07773523.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas
           fluorescens WH6]
 gi|311286774|gb|EFQ65336.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas
           fluorescens WH6]
          Length = 265

 Score =  105 bits (263), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 122/215 (56%), Gaps = 1/215 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I+Q++ VGV  + ++++     G V+A QG   LS +G+E     ++++  LRE+G ++T
Sbjct: 49  IKQLHSVGVMSLVIIVVSGIFIGMVLALQGFNILSGYGSEQAVGQMVALTLLRELGPVVT 108

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  ISLPLL ++ + 
Sbjct: 109 ALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLAMIFSV 168

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             I G S V   +  +    ++    ++ T   ++  G+IK+   A  +  +A+ +G+  
Sbjct: 169 VGIWGGSWVAVDWLGVYDGSYWGNMQNSVTFNGDVLNGIIKSIVFAFVVTWIAVFQGYDC 228

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
              S  + +  T  VV +   V+ +D +     F 
Sbjct: 229 EPTSEGISRATTKTVVYASLAVLGLDFILTALMFG 263


>gi|317050884|ref|YP_004112000.1| hypothetical protein Selin_0700 [Desulfurispirillum indicum S5]
 gi|316945968|gb|ADU65444.1| protein of unknown function DUF140 [Desulfurispirillum indicum S5]
          Length = 256

 Score =  105 bits (263), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 73/186 (39%), Positives = 105/186 (56%), Gaps = 7/186 (3%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q   +GV+ + VV+L    TG V+A Q     SQF AE     + ++   RE+G +LTA
Sbjct: 45  KQFESIGVNSIFVVLLTGTFTGMVLALQLYIGFSQFHAEYLVGAVSALAIFRELGPVLTA 104

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +M+  R+GSA+ AE+G+MK+ E+IDA+RTM +D  + L +PRI A  + LP+LT++AN  
Sbjct: 105 LMVTARAGSAMAAELGTMKVTEQIDALRTMAVDPHQYLATPRILASFVMLPVLTMVANAV 164

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK-APF------MACAIGIVAMK 330
           AI G   V  K   I   VF  +      + +I  GLIK A F      + C IG+ A K
Sbjct: 165 AIGGCYFVGVKLLGINPVVFVDQIIIFVDMGDIINGLIKSAAFGLVMGSVCCGIGMNASK 224

Query: 331 EGFAVG 336
               VG
Sbjct: 225 GAAGVG 230


>gi|260770986|ref|ZP_05879915.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           furnissii CIP 102972]
 gi|260614223|gb|EEX39413.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           furnissii CIP 102972]
 gi|315179032|gb|ADT85946.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Vibrio furnissii NCTC
           11218]
          Length = 263

 Score =  105 bits (263), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 118/216 (54%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q+Y VGV  + ++++     G V++ QG   L  +GAE     ++++  LRE+G ++
Sbjct: 47  LIKQLYSVGVQSLAIIVVSGLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVV 106

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D ++ +I+PR+WA +IS+PLL ++  
Sbjct: 107 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRLWAGLISMPLLAMIFM 166

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G  +V   +  I    F+S   ++  L  +I   +IK    A  +  +A+  G+ 
Sbjct: 167 AVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGEDIGNSVIKCVAFAITVTWIALFNGYD 226

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV S   V+ +D +     F 
Sbjct: 227 AIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 262


>gi|149277771|ref|ZP_01883911.1| ABC transporter, permease [Pedobacter sp. BAL39]
 gi|149231459|gb|EDM36838.1| ABC transporter, permease [Pedobacter sp. BAL39]
          Length = 269

 Score =  105 bits (263), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 127/243 (52%), Gaps = 7/243 (2%)

Query: 134 LVISNTGEFCASSYKFKGFLL-----SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
           L + +  +F    +K +GFL       L+RQ Y +G   + ++ L  F+TG V  +Q   
Sbjct: 26  LTLYDVCQFVTRFFK-EGFLPPYEGKELMRQCYDIGYRSLALISLTGFITGVVFTKQSRP 84

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L++FGA  +   L+ I  LR +  LLTA++ AG+ GS+I AE+GSM++ E+IDA+    
Sbjct: 85  SLAEFGATSWLPSLVGIALLRTLAPLLTALIAAGKVGSSIGAELGSMRVTEQIDAMEVSA 144

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
            +  + L+S R+ A  I++P+LT       ++GA + +  + D     FF     + T  
Sbjct: 145 TNPFKFLVSTRVMASTITIPILTFYTAMVGMLGALLNVSLFEDTSARAFFQMSLESITFL 204

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +I    +KA      IG+V   +G+     +  +GK   + VV  +  +I I+ + ++ +
Sbjct: 205 DITASTVKAILFGFTIGMVGCYQGYNSSKGTEGVGKAANSAVVIGM-FLIFIEEVISVQF 263

Query: 369 FAI 371
           F++
Sbjct: 264 FSL 266


>gi|109896888|ref|YP_660143.1| hypothetical protein Patl_0560 [Pseudoalteromonas atlantica T6c]
 gi|109699169|gb|ABG39089.1| protein of unknown function DUF140 [Pseudoalteromonas atlantica
           T6c]
          Length = 259

 Score =  105 bits (263), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 121/216 (56%), Gaps = 1/216 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I+Q+Y VGV  + ++++     G V+A QG   L  +GAE     ++++  LRE+G ++T
Sbjct: 43  IKQIYVVGVQSLLIIVVSGLFIGMVMALQGYTILVDYGAEGSLGPMVALSLLRELGPVVT 102

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +++PR+WA IIS+P+L ++ + 
Sbjct: 103 ALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVVAPRLWAGIISMPMLALIFSA 162

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             I+G  +V   +  +    ++S   S+     ++  G+IK    A  I  +A+ +G+  
Sbjct: 163 VGILGGHLVGVDWLGVDVGSYWSIMQSSVDWNEDVVNGIIKTLVFAFVITWIAIFKGYDA 222

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
              S  + K  T  VV S   V+ +D +     F I
Sbjct: 223 VPTSEGISKATTETVVFSSLAVLGLDFILTALMFGI 258


>gi|254509100|ref|ZP_05121202.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Vibrio parahaemolyticus
           16]
 gi|219547981|gb|EED25004.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Vibrio parahaemolyticus
           16]
          Length = 263

 Score =  105 bits (263), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 118/216 (54%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q+Y VGV  + +++L     G V++ QG   L  FGAE     ++++  LRE+G ++
Sbjct: 47  LIKQLYSVGVQSLLIIVLSGLFIGMVLSLQGYVILIDFGAEGALGQMVALSLLRELGPVV 106

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D ++ +I+PR WA +IS+PLL ++  
Sbjct: 107 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLKRVIAPRFWAGVISMPLLAMIFM 166

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G  +V   +  I    F++   S+  L  +I   +IK+   A  +  +A+  G+ 
Sbjct: 167 AVGIWGGQLVGVDWKGIDHGSFWAAMQSSVELGQDIGNSMIKSLAFAITVTWIALFNGYD 226

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV S   V+ +D +     F 
Sbjct: 227 AIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 262


>gi|222054639|ref|YP_002537001.1| protein of unknown function DUF140 [Geobacter sp. FRC-32]
 gi|221563928|gb|ACM19900.1| protein of unknown function DUF140 [Geobacter sp. FRC-32]
          Length = 258

 Score =  105 bits (263), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 135/254 (53%), Gaps = 15/254 (5%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGF---LLSLIRQMYYVGVSGVP 169
            IG+K++KF         I+G ++   G+   + Y F+     L S+  QM  +G   +P
Sbjct: 7   RIGRKVIKF-------HEIIGEMLILLGQ---TVYFFREAPRNLASIFAQMAIIGYETLP 56

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V  +++F  G V+A Q   +L+++G++     ++    +RE+G ++T+ ++AGR GSA+ 
Sbjct: 57  VASVMAFFVGMVLALQTGVELNKYGSQDIIGAIVGHSMVRELGPVMTSFLVAGRVGSAMA 116

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV--IW 287
           AE+G MK+ EEIDA++T+ ++ VR L  PR  A I+ +P L I ++   I+G +I+  + 
Sbjct: 117 AELGVMKVYEEIDALKTLDINPVRYLAMPRFIACIVCVPALVIYSDCIGIVGGAIISNLH 176

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
               + ++ ++    +      I  GLIKA      + +V+   GF     +  +G   T
Sbjct: 177 PKIFVSYSTYYDSLTAALKFQEIGNGLIKAFVFGAIVALVSCYVGFKTSGGARGIGISTT 236

Query: 348 TCVVQSISIVIIID 361
             VV S  ++++ D
Sbjct: 237 RSVVWSFMLILVAD 250


>gi|259907019|ref|YP_002647375.1| ABC transporter, permease subunit, probable toluene tolerance
           protein [Erwinia pyrifoliae Ep1/96]
 gi|224962641|emb|CAX54096.1| ABC transporter, permease subunit, probable toluene tolerance
           protein [Erwinia pyrifoliae Ep1/96]
 gi|283476814|emb|CAY72652.1| UPF0393 inner membrane protein yrbE [Erwinia pyrifoliae DSM 12163]
          Length = 260

 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 123/227 (54%), Gaps = 7/227 (3%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           +F+     L++Q+Y +GV  + +V++     G V+  QG   L  +GAE  S+ +M  L 
Sbjct: 36  RFRKHAPLLVKQLYNIGVLSLLIVVVSGLFIGMVLGLQGYLILKTYGAEA-SLGMMVALS 94

Query: 208 L-REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
           L RE+G +++A++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +ISPR WA  IS
Sbjct: 95  LLRELGPVVSALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRIISPRFWAGFIS 154

Query: 267 LPLLTILANFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACA 323
           +PLLT++     I+G ++  V WK  D  F  F+S   +   L  +I    IK+   A  
Sbjct: 155 MPLLTLIFVAVGILGGALVGVSWKGIDSGF--FWSAMQNAVDLQTDIINCTIKSAVFAVT 212

Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  +A+  G+     S  + +  T  VV +   V+ +D +     F 
Sbjct: 213 VTWIALFNGYDAIPTSEGISRATTRTVVHASLAVLGLDFVLTALMFG 259


>gi|157148765|ref|YP_001456084.1| hypothetical protein CKO_04597 [Citrobacter koseri ATCC BAA-895]
 gi|157085970|gb|ABV15648.1| hypothetical protein CKO_04597 [Citrobacter koseri ATCC BAA-895]
          Length = 260

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 118/218 (54%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y VGV  + ++I+     G V+  QG   L+ + AE     L+++  LRE+G ++
Sbjct: 44  LVRQLYNVGVLSMLIIIVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ AGR+GSA+ AEIG M+  E++ ++  M +D +R +ISPR+WA +ISLPLLTI+  
Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRLWAGVISLPLLTIIFV 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEG 332
              I G S+  V WK  D  F  F+S          ++   LIK+   A  +  +A+  G
Sbjct: 164 AVGIWGGSLVGVSWKGIDAGF--FWSAMQDAVDWRLDLVNCLIKSVVFAITVTWIALFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV S   V+ +D +     F 
Sbjct: 222 YDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|262273844|ref|ZP_06051657.1| uncharacterized ABC transporter permease component YrbE [Grimontia
           hollisae CIP 101886]
 gi|262222259|gb|EEY73571.1| uncharacterized ABC transporter permease component YrbE [Grimontia
           hollisae CIP 101886]
          Length = 260

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 118/216 (54%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+ Q+Y VGV  + ++++     G V++ QG   L+ FGAE     ++++  LRE+G ++
Sbjct: 44  LLTQIYSVGVRSLAIIMVSGLFIGMVLSLQGYLVLADFGAESSLGQMVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +++PR WA +IS+PLL ++  
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLAMIFM 163

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G  +V   +  I +  +++   S+  L  +I    IK+   A  +  +A+  G+ 
Sbjct: 164 MVGIWGGQLVGVDWKGIDYGSYWAVMQSSVELGYDIGQSFIKSLVFAITVTWIALFNGYD 223

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV S   V+ +D +     F 
Sbjct: 224 AIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|310766231|gb|ADP11181.1| ABC transporter, permease subunit, probable toluene tolerance
           protein [Erwinia sp. Ejp617]
          Length = 235

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 123/227 (54%), Gaps = 7/227 (3%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           +F+     L++Q+Y +GV  + +V++     G V+  QG   L  +GAE  S+ +M  L 
Sbjct: 11  RFRKHAPLLVKQLYNIGVLSLLIVVVSGLFIGMVLGLQGYLILKTYGAEA-SLGMMVALS 69

Query: 208 L-REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
           L RE+G +++A++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +ISPR WA  IS
Sbjct: 70  LLRELGPVVSALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRIISPRFWAGFIS 129

Query: 267 LPLLTILANFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACA 323
           +PLLT++     I+G ++  V WK  D  F  F+S   +   L  +I    IK+   A  
Sbjct: 130 MPLLTLIFVAVGILGGALVGVSWKGIDSGF--FWSAMQNAVDLQTDIINCTIKSAVFAVT 187

Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  +A+  G+     S  + +  T  VV +   V+ +D +     F 
Sbjct: 188 VTWIALFNGYDAIPTSEGISRATTRTVVHASLAVLGLDFVLTALMFG 234


>gi|318604041|emb|CBY25539.1| uncharacterized ABC transporter, permease component YrbE [Yersinia
           enterocolitica subsp. palearctica Y11]
          Length = 260

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 118/218 (54%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y VGV  + ++++     G V+  QG   L+ + AE     ++S+  LRE+G ++
Sbjct: 44  LVKQLYSVGVQSLLIIVVSGLFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E+I ++  M +D +R +++PR WA +IS+PLLT +  
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFV 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
              I G S+  V WK  D  F  F+S   S      ++   LIK+   A  +  +A+  G
Sbjct: 164 AVGIWGGSVVGVDWKGIDGGF--FWSAMQSAVEWRTDLLNCLIKSLVFAITVMWIALFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV S   V+ +D +     F 
Sbjct: 222 YDAVPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|220904015|ref|YP_002479327.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219868314|gb|ACL48649.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 267

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 121/218 (55%), Gaps = 7/218 (3%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           ++Q+Y +G     +++LI    G V+  QG + L QFG+       +S+  +RE+G +LT
Sbjct: 50  MQQLYIIGSKSFFLIMLIGVFCGMVLGLQGYYTLVQFGSVGMLGSAVSLTLIRELGPVLT 109

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A+M+ GR+GS++ AEIG M+I ++IDA+  M ++ +  L+SPR+ A +I+ PLLT + + 
Sbjct: 110 AIMLTGRAGSSMTAEIGVMRITDQIDALDVMDINSMGYLVSPRLVASLIAFPLLTAVFDV 169

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
             IIG  +       I    +F R  S+ T+ ++  G IK+      +  +  ++G+   
Sbjct: 170 IGIIGGYLTGVLMLGINEGAYFYRIASSVTMTDVAGGFIKSVVFGLLVTTICCRQGYYTN 229

Query: 337 VHSNSLGKK-----VTTCVVQSISIVIIIDSLFAIFYF 369
              +S+G +      T+ VV  IS V+I+ + + I  F
Sbjct: 230 KRRDSVGPEAVGNATTSAVV--ISCVLILAADYVITSF 265


>gi|260779434|ref|ZP_05888325.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260604524|gb|EEX30824.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 263

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 118/216 (54%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y VGV  + +++L     G V++ QG   L  FGAE     ++++  LRE+G ++
Sbjct: 47  LVKQLYSVGVQSLIIIVLSGLFIGMVLSLQGYVILVDFGAEGALGQMVALSLLRELGPVV 106

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D ++ +I+PR WA +IS+P+L ++  
Sbjct: 107 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLKRVIAPRFWAGVISMPMLAMIFM 166

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G  +V   +  I    F+S   ++  L  +I   +IK+   A  +  +A+  G+ 
Sbjct: 167 AVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSMIKSLVFAITVTWIALFNGYD 226

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV S   V+ +D +     F 
Sbjct: 227 AIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 262


>gi|254670842|emb|CBA07277.1| putative membrane protein [Neisseria meningitidis alpha153]
 gi|308390063|gb|ADO32383.1| putative ABC transport inner membrane subunit [Neisseria
           meningitidis alpha710]
 gi|309378880|emb|CBX22467.1| unnamed protein product [Neisseria lactamica Y92-1009]
 gi|319409726|emb|CBY90032.1| conserved hypothetical membrane protein [Neisseria meningitidis WUE
           2594]
 gi|325127428|gb|EGC50359.1| putative membrane protein [Neisseria meningitidis N1568]
 gi|325137489|gb|EGC60074.1| putative membrane protein [Neisseria meningitidis ES14902]
          Length = 258

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 120/215 (55%), Gaps = 3/215 (1%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215
           +RQ+Y+ GV  V +V +     G V+  QG  QLS+F  A+I    + + L LRE+G +L
Sbjct: 43  VRQVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASL-LRELGPVL 101

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ A  +G A+ +EIG MK  E+++A+  M ++ V  +++PR WA + S+PLL  + N
Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFN 161

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
            + I GA +V   +  +   +F+S+  +  T+  ++  GLIK+     A+ ++A+ +GF 
Sbjct: 162 VAGIFGAYLVGVSWLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFH 221

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               S  + +  T  VV S   ++ +D +   + F
Sbjct: 222 CVPTSEGILRASTRTVVSSALTILAVDFILTAWMF 256


>gi|15677795|ref|NP_274959.1| hypothetical protein NMB1965 [Neisseria meningitidis MC58]
 gi|218767464|ref|YP_002341976.1| putative ABC transport inner membrane subunit [Neisseria
           meningitidis Z2491]
 gi|254804222|ref|YP_003082443.1| putative ABC transport system permease protein [Neisseria
           meningitidis alpha14]
 gi|296313905|ref|ZP_06863846.1| toluene tolerance ABC efflux transporter, permease [Neisseria
           polysaccharea ATCC 43768]
 gi|313669181|ref|YP_004049465.1| ABC transport inner membrane subunit [Neisseria lactamica ST-640]
 gi|7227225|gb|AAF42294.1| conserved hypothetical protein [Neisseria meningitidis MC58]
 gi|121051472|emb|CAM07765.1| putative ABC transport inner membrane subunit [Neisseria
           meningitidis Z2491]
 gi|254667764|emb|CBA03695.1| putative ABC transport system permease protein [Neisseria
           meningitidis alpha14]
 gi|254672981|emb|CBA07458.1| putative ABC transport system permease protein [Neisseria
           meningitidis alpha275]
 gi|261393293|emb|CAX50921.1| conserved hypothetical membrane protein [Neisseria meningitidis
           8013]
 gi|296839439|gb|EFH23377.1| toluene tolerance ABC efflux transporter, permease [Neisseria
           polysaccharea ATCC 43768]
 gi|313006643|emb|CBN88109.1| putative ABC transport inner membrane subunit [Neisseria lactamica
           020-06]
 gi|316985593|gb|EFV64540.1| toluene tolerance protein Ttg2B [Neisseria meningitidis H44/76]
 gi|325129426|gb|EGC52257.1| putative membrane protein [Neisseria meningitidis OX99.30304]
 gi|325135556|gb|EGC58174.1| putative membrane protein [Neisseria meningitidis M0579]
 gi|325139615|gb|EGC62155.1| putative membrane protein [Neisseria meningitidis CU385]
 gi|325201013|gb|ADY96468.1| putative membrane protein [Neisseria meningitidis H44/76]
 gi|325201398|gb|ADY96852.1| putative membrane protein [Neisseria meningitidis M01-240149]
 gi|325204915|gb|ADZ00369.1| putative membrane protein [Neisseria meningitidis M01-240355]
 gi|325207379|gb|ADZ02831.1| putative membrane protein [Neisseria meningitidis NZ-05/33]
          Length = 258

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 120/215 (55%), Gaps = 3/215 (1%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215
           +RQ+Y+ GV  V +V +     G V+  QG  QLS+F  A+I    + + L LRE+G +L
Sbjct: 43  VRQVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASL-LRELGPVL 101

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ A  +G A+ +EIG MK  E+++A+  M ++ V  +++PR WA + S+PLL  + N
Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFN 161

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
            + I GA +V   +  +   +F+S+  +  T+  ++  GLIK+     A+ ++A+ +GF 
Sbjct: 162 VAGIFGAYLVGVTWLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFH 221

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               S  + +  T  VV S   ++ +D +   + F
Sbjct: 222 CVPTSEGILRASTRTVVSSALTILAVDFILTAWMF 256


>gi|229513445|ref|ZP_04402909.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae TMA 21]
 gi|229524502|ref|ZP_04413907.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae bv. albensis VL426]
 gi|261211081|ref|ZP_05925370.1| uncharacterized ABC transporter permease component YrbE [Vibrio sp.
           RC341]
 gi|229338083|gb|EEO03100.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae bv. albensis VL426]
 gi|229349322|gb|EEO14278.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae TMA 21]
 gi|260839582|gb|EEX66193.1| uncharacterized ABC transporter permease component YrbE [Vibrio sp.
           RC341]
          Length = 263

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 116/216 (53%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y +GV  + ++I+     G V++ QG   L  +GAE     ++++  LRE+G ++
Sbjct: 47  LVRQLYSIGVQSLAIIIVSGLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVV 106

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D ++ +I+PR WA +IS+PLL ++  
Sbjct: 107 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFM 166

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G  +V   +  I    F+S   ++  L  +I    IK    A  +  +A+  G+ 
Sbjct: 167 AVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYD 226

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV S   V+ +D +     F 
Sbjct: 227 AIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 262


>gi|238789753|ref|ZP_04633535.1| hypothetical protein yfred0001_29030 [Yersinia frederiksenii ATCC
           33641]
 gi|238722112|gb|EEQ13770.1| hypothetical protein yfred0001_29030 [Yersinia frederiksenii ATCC
           33641]
          Length = 235

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 118/218 (54%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y VGV  + ++++     G V+  QG   L+ + AE     ++S+  LRE+G ++
Sbjct: 19  LLKQLYSVGVQSLLIIVVSGLFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVV 78

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E+I ++  M +D +R +++PR WA +IS+PLLT +  
Sbjct: 79  TALLFAGRAGSALTAEIGLMKATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFV 138

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
              I G S+  V WK  D  F  F+S   S      ++   LIK+   A  +  +A+  G
Sbjct: 139 AVGIWGGSVVGVDWKGIDGGF--FWSAMQSAVEWRTDLLNCLIKSLVFAITVTWIALFNG 196

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV S   V+ +D +     F 
Sbjct: 197 YDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 234


>gi|254229285|ref|ZP_04922703.1| conserved hypothetical protein [Vibrio sp. Ex25]
 gi|262393183|ref|YP_003285037.1| ABC transporter permease component YrbE [Vibrio sp. Ex25]
 gi|151938209|gb|EDN57049.1| conserved hypothetical protein [Vibrio sp. Ex25]
 gi|262336777|gb|ACY50572.1| uncharacterized ABC transporter permease component YrbE [Vibrio sp.
           Ex25]
          Length = 263

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 121/232 (52%), Gaps = 2/232 (0%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G         K F L L++Q+Y VGV  + ++++     G V++ QG   L  +GAE   
Sbjct: 32  GALFTKPQPLKSFPL-LVKQLYSVGVQSLAIIVVSGLFIGMVLSLQGYVVLVDYGAEGSL 90

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
             ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK  E++ ++  M +D ++ +I+PR
Sbjct: 91  GQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPR 150

Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAP 318
            WA  IS+PLL ++     I GA +V   +  +    F+S   S+  L  +I   +IK  
Sbjct: 151 FWAGAISMPLLAMIFMAVGIWGAQLVGVDWKGVDHGSFWSAMQSSVELGQDIGNSMIKCF 210

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             A  +  VA+  G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 211 AFAITVTWVALFNGYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 262


>gi|77457091|ref|YP_346596.1| hypothetical protein Pfl01_0864 [Pseudomonas fluorescens Pf0-1]
 gi|77381094|gb|ABA72607.1| putative ABC transport system, membrane protein [Pseudomonas
           fluorescens Pf0-1]
          Length = 265

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 123/215 (57%), Gaps = 1/215 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           ++Q++ VGV  + ++++     G V+A QG   LS +G+E     ++++  LRE+G ++T
Sbjct: 49  VKQLHSVGVMSLVIIVVSGIFIGMVLALQGFNILSSYGSEQAVGQMVALTLLRELGPVVT 108

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +I+PR+WA  ISLP+L ++ + 
Sbjct: 109 ALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIIAPRLWAGFISLPVLAMIFSV 168

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAV 335
             I G S V   +  +    ++S   ++ +   ++  G+IK+   A  +  +A+ +G+  
Sbjct: 169 VGIWGGSWVAVDWLGVYEGSYWSNMQNSVSFGDDVLNGIIKSAVFAFVVTWIAVFQGYDC 228

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
              S  + +  T  VV +   V+ +D +     F 
Sbjct: 229 EPTSEGISRATTKTVVYASLAVLGLDFILTALMFG 263


>gi|121727423|ref|ZP_01680551.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|229507423|ref|ZP_04396928.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae BX 330286]
 gi|229509652|ref|ZP_04399133.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae B33]
 gi|229516777|ref|ZP_04406223.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae RC9]
 gi|229606930|ref|YP_002877578.1| ABC transporter permease [Vibrio cholerae MJ-1236]
 gi|254851063|ref|ZP_05240413.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255744503|ref|ZP_05418455.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholera CIRS 101]
 gi|262154673|ref|ZP_06028799.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae INDRE 91/1]
 gi|262167549|ref|ZP_06035254.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae RC27]
 gi|262191035|ref|ZP_06049244.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae CT 5369-93]
 gi|297581366|ref|ZP_06943289.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|298500651|ref|ZP_07010455.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|121630195|gb|EAX62595.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|229345840|gb|EEO10812.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae RC9]
 gi|229353126|gb|EEO18065.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae B33]
 gi|229354928|gb|EEO19849.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae BX 330286]
 gi|229369585|gb|ACQ60008.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae MJ-1236]
 gi|254846768|gb|EET25182.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255738028|gb|EET93421.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholera CIRS 101]
 gi|262024002|gb|EEY42698.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae RC27]
 gi|262030513|gb|EEY49151.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae INDRE 91/1]
 gi|262033098|gb|EEY51627.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae CT 5369-93]
 gi|297534204|gb|EFH73042.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297540820|gb|EFH76877.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|327485006|gb|AEA79413.1| Uncharacterized ABC transporter, permease component YrbE [Vibrio
           cholerae LMA3894-4]
          Length = 263

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 116/216 (53%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y +GV  + ++I+     G V++ QG   L  +GAE     ++++  LRE+G ++
Sbjct: 47  LVRQLYSIGVQSLAIIIVSGLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVV 106

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D ++ +I+PR WA +IS+PLL ++  
Sbjct: 107 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFM 166

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G  +V   +  I    F+S   ++  L  +I    IK    A  +  +A+  G+ 
Sbjct: 167 AVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYD 226

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV S   V+ +D +     F 
Sbjct: 227 AIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 262


>gi|27364141|ref|NP_759669.1| ABC transporter permease YrbE [Vibrio vulnificus CMCP6]
 gi|320157526|ref|YP_004189905.1| ABC transporter permease YrbE [Vibrio vulnificus MO6-24/O]
 gi|27360259|gb|AAO09196.1| Uncharacterized ABC transporter, permease component YrbE [Vibrio
           vulnificus CMCP6]
 gi|319932838|gb|ADV87702.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           vulnificus MO6-24/O]
          Length = 262

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 118/216 (54%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y VGV  + ++++     G V++ QG   L  +GAE     ++++  LRE+G ++
Sbjct: 46  LVKQIYNVGVQSLAIIVVSGLFIGMVLSLQGYVILVDYGAEGSLGQMVALSLLRELGPVV 105

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D ++ +I+PR+WA IIS+PLL ++  
Sbjct: 106 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLKRIIAPRLWAGIISMPLLAMIFM 165

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G  +V   +  I    F+S   ++  L  +I   +IK    A  +  +A+  G+ 
Sbjct: 166 AVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSMIKCVVFAITVTWIALFNGYD 225

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV S   V+ +D +     F 
Sbjct: 226 AIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 261


>gi|37678640|ref|NP_933249.1| ABC-type transport system, permease component [Vibrio vulnificus
           YJ016]
 gi|37197380|dbj|BAC93220.1| ABC-type transport system, permease component [Vibrio vulnificus
           YJ016]
          Length = 262

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 118/216 (54%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y VGV  + ++++     G V++ QG   L  +GAE     ++++  LRE+G ++
Sbjct: 46  LVKQIYNVGVQSLAIIVVSGLFIGMVLSLQGYVILVDYGAEGSLGQMVALSLLRELGPVV 105

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D ++ +I+PR+WA IIS+PLL ++  
Sbjct: 106 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLKRIIAPRLWAGIISMPLLAMIFM 165

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G  +V   +  I    F+S   ++  L  +I   +IK    A  +  +A+  G+ 
Sbjct: 166 AVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSMIKCVVFAITVTWIALFNGYD 225

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV S   V+ +D +     F 
Sbjct: 226 AIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 261


>gi|320538922|ref|ZP_08038598.1| putative phospholipid transporter subunit: membrane component of
           ABC superfamily [Serratia symbiotica str. Tucson]
 gi|320031082|gb|EFW13085.1| putative phospholipid transporter subunit: membrane component of
           ABC superfamily [Serratia symbiotica str. Tucson]
          Length = 260

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 120/219 (54%), Gaps = 7/219 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           L++QMY +GV  + ++++     G V+  QG   L+ + AE  S+ +M  L L RE+G +
Sbjct: 44  LLKQMYSIGVQSLLIIMVSGLFIGMVLGLQGYIVLTTYSAEA-SLGMMVALSLLRELGPV 102

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGR+GSA+ AEIG MK  E+I ++  M +D +R +++PR WA +ISLPLLTI+ 
Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLRRIVAPRFWAGLISLPLLTIIF 162

Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331
               ++G +I  V WK  D  F  F+S          ++   L+K+   A  +  +A+  
Sbjct: 163 VALGMLGGAIVGVDWKGIDSGF--FWSAMQGAVEWKKDLLNCLLKSVVFAITVTWIAIFN 220

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 221 GYDAVPTSTGISQATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|161869245|ref|YP_001598412.1| putative ABC transport system permease protein [Neisseria
           meningitidis 053442]
 gi|304388521|ref|ZP_07370624.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Neisseria meningitidis ATCC 13091]
 gi|161594798|gb|ABX72458.1| putative ABC transport system permease protein [Neisseria
           meningitidis 053442]
 gi|304337518|gb|EFM03684.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Neisseria meningitidis ATCC 13091]
          Length = 258

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 120/215 (55%), Gaps = 3/215 (1%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215
           +RQ+Y+ GV  V +V +     G V+  QG  QLS+F  A+I    + + L LRE+G +L
Sbjct: 43  VRQVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASL-LRELGPVL 101

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ A  +G A+ +EIG MK  E+++A+  M ++ V  +++PR WA + S+PLL  + N
Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFN 161

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
            + I GA +V   +  +   +F+S+  +  T+  ++  GLIK+     A+ ++A+ +GF 
Sbjct: 162 VAGIFGAYLVGVTWLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFH 221

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               S  + +  T  VV S   ++ +D +   + F
Sbjct: 222 CVPTSEGILRASTRTVVSSALTILAVDFILTAWMF 256


>gi|188532480|ref|YP_001906277.1| ABC transporter, permease subunit, probable toluene tolerance
           protein [Erwinia tasmaniensis Et1/99]
 gi|188027522|emb|CAO95369.1| ABC transporter, permease subunit, probable toluene tolerance
           protein [Erwinia tasmaniensis Et1/99]
          Length = 260

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 122/227 (53%), Gaps = 7/227 (3%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           +F+     L++Q+Y +GV  + +V++     G V+  QG   L  + AE  S+ +M  L 
Sbjct: 36  RFRKHAPLLVKQLYSIGVLSLLIVVVSGLFIGMVLGLQGYLVLKTYSAET-SLGMMVALS 94

Query: 208 L-REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
           L RE+G ++TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +ISPR WA  IS
Sbjct: 95  LLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRIISPRFWAGFIS 154

Query: 267 LPLLTILANFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACA 323
           +PLLT++     I+G ++  V WK  D  F  F+S   +   L  +I    IK+   A  
Sbjct: 155 MPLLTLIFVAVGILGGALVGVSWKGIDPGF--FWSAMQNAVDLRTDIINCTIKSAVFALT 212

Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  +A+  G+     S  + +  T  VV +   V+ +D +     F 
Sbjct: 213 VTWIALFNGYDAIPTSEGISRATTRTVVHASLAVLGLDFVLTALMFG 259


>gi|146305912|ref|YP_001186377.1| hypothetical protein Pmen_0877 [Pseudomonas mendocina ymp]
 gi|145574113|gb|ABP83645.1| protein of unknown function DUF140 [Pseudomonas mendocina ymp]
          Length = 265

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 124/216 (57%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q++ VGV  + ++++     G V+A QG   L  +G+E     ++++  LRE+G ++
Sbjct: 48  LIKQLFAVGVMSLAIIVVSGIFIGMVLALQGYNILVSYGSEQAVGQMVALTLLRELGPVV 107

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +I+PR+WA  IS+PLL ++ +
Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIIAPRLWAGFISMPLLAMIFS 167

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G ++V   +  +    F+S   ++ +   ++  G+IK+   A  +  +A+ +G+ 
Sbjct: 168 VVGIWGGAMVAVDWLGVYEGSFWSNMQNSVSFYDDVLNGVIKSIVFAFVVTWIAVFQGYD 227

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV +   V+ +D +     F 
Sbjct: 228 CEPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 263


>gi|15642515|ref|NP_232148.1| hypothetical protein VC2519 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121591413|ref|ZP_01678693.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|147675288|ref|YP_001218017.1| hypothetical protein VC0395_A2101 [Vibrio cholerae O395]
 gi|153215706|ref|ZP_01950087.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|153801107|ref|ZP_01955693.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|153818001|ref|ZP_01970668.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153822409|ref|ZP_01975076.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|153825790|ref|ZP_01978457.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|153829794|ref|ZP_01982461.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|227082638|ref|YP_002811189.1| hypothetical protein VCM66_2441 [Vibrio cholerae M66-2]
 gi|254225914|ref|ZP_04919516.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|254291437|ref|ZP_04962229.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|9657102|gb|AAF95661.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121546729|gb|EAX56904.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|124114624|gb|EAY33444.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|124123340|gb|EAY42083.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|125621540|gb|EAZ49872.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|126511436|gb|EAZ74030.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126520052|gb|EAZ77275.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|146317171|gb|ABQ21710.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|148874712|gb|EDL72847.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|149740513|gb|EDM54628.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|150422627|gb|EDN14582.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|227010526|gb|ACP06738.1| conserved hypothetical protein [Vibrio cholerae M66-2]
 gi|227014409|gb|ACP10619.1| conserved hypothetical protein [Vibrio cholerae O395]
          Length = 258

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 116/216 (53%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y +GV  + ++I+     G V++ QG   L  +GAE     ++++  LRE+G ++
Sbjct: 42  LVRQLYSIGVQSLAIIIVSGLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVV 101

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D ++ +I+PR WA +IS+PLL ++  
Sbjct: 102 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFM 161

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G  +V   +  I    F+S   ++  L  +I    IK    A  +  +A+  G+ 
Sbjct: 162 AVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYD 221

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV S   V+ +D +     F 
Sbjct: 222 AIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 257


>gi|296122312|ref|YP_003630090.1| hypothetical protein Plim_2064 [Planctomyces limnophilus DSM 3776]
 gi|296014652|gb|ADG67891.1| protein of unknown function DUF140 [Planctomyces limnophilus DSM
           3776]
          Length = 260

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 116/208 (55%)

Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
           Y +G   +PV+++     G V+A Q   QL+  G +     ++++  ++E+G +L A M+
Sbjct: 38  YEIGCRSMPVILITGGFIGMVLAVQSFDQLAAIGLQSRLGSVVNVSLVKELGPVLAATML 97

Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280
           AGR GSA+ AEIG+MK+ E+IDA++ +G + V  L+ PR  A ++ +P LT+LA+   ++
Sbjct: 98  AGRVGSAMAAEIGTMKVTEQIDALQALGANPVMFLVCPRFLACVLLIPALTLLADGIGML 157

Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
               +  +   I   +++    S  T  +I +G+IK+ F   AI +VA   GF     + 
Sbjct: 158 SGWYLSVQVLGISSHLYWFYSDSYITSLDIISGVIKSIFFGGAIALVACHRGFHCSSGAE 217

Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFY 368
            +G+  T   V S  +V+ +D L  +F+
Sbjct: 218 GVGRAATEAFVCSFILVLAMDFLLGVFF 245


>gi|329120837|ref|ZP_08249497.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Neisseria bacilliformis
           ATCC BAA-1200]
 gi|327459709|gb|EGF06050.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Neisseria bacilliformis
           ATCC BAA-1200]
          Length = 258

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 119/215 (55%), Gaps = 3/215 (1%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215
           +RQ+Y+ GV  V ++ +     G V+  QG  QL++F  A+I    + + L LRE+G +L
Sbjct: 43  VRQVYFAGVLSVLIIAVSGLFVGMVLGLQGYTQLAKFKSADILGYMVAASL-LRELGPVL 101

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ A  +G A+ +EIG MK  E+++A+  M ++ V  +++PR WA + S+PLL  + N
Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFN 161

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
            + I GA +V  ++  +   +F+S+  +      ++  GLIK+     A+ ++A+ +GF 
Sbjct: 162 VAGIYGAYLVGVEWLGLDGGIFWSQMQNNIAFGYDVLNGLIKSACFGVAVTLIAVHQGFH 221

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               S  + +  T  VV S   V+ +D +   F F
Sbjct: 222 CVPTSEGILRASTRTVVSSALTVLAVDFILTAFMF 256


>gi|218782260|ref|YP_002433578.1| hypothetical protein Dalk_4431 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218763644|gb|ACL06110.1| protein of unknown function DUF140 [Desulfatibacillum alkenivorans
           AK-01]
          Length = 268

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 119/218 (54%), Gaps = 7/218 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE-IFSIDLMSILQLREIGVL 214
           ++ Q+  +G   + VV LI   TG V+  Q    L+ FG+E +    ++  L ++E+G +
Sbjct: 50  ILTQINIIGAQSLYVVSLIGLFTGMVLGLQLYNALANFGSEGMLGTSIVHTL-IKEMGPV 108

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           L A+M+  R+GSA+ AEIG M+I+EEIDA+ TM ++ +R L+SPR+ A IIS PLLT L 
Sbjct: 109 LAAIMVTARAGSAMAAEIGIMRISEEIDALDTMQINPIRFLVSPRLAAAIISFPLLTALF 168

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
           +  A+ G  +   K   +  A ++    ++  + +I  G +KA   A  +  V   +G+ 
Sbjct: 169 DVIALFGGYLTGCKLKGLNDATYWYTVENSLVMEDINGGFLKAIVFAVIVITVCCYQGYT 228

Query: 335 VGVHSNSLGKK-----VTTCVVQSISIVIIIDSLFAIF 367
             +  N  G K      T+ VV S  ++++ D +   F
Sbjct: 229 THMRPNGFGAKGVSASTTSAVVMSCVLILMADFVLTAF 266


>gi|212702437|ref|ZP_03310565.1| hypothetical protein DESPIG_00454 [Desulfovibrio piger ATCC 29098]
 gi|212674098|gb|EEB34581.1| hypothetical protein DESPIG_00454 [Desulfovibrio piger ATCC 29098]
          Length = 375

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 110/198 (55%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +  MY  GV  +P++ + S + G ++A  GA QL+QFGA+I+   L+ I  LR +G ++ 
Sbjct: 159 VEAMYECGVRALPIISITSLLFGLILAFVGAVQLTQFGAQIYVAGLVGIGMLRVMGAVMV 218

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
            V+++GR G+A  A IG+M++NEE+DA+ T+G+  +  L+ PR+ AL+  +PLLT+ A+ 
Sbjct: 219 GVVMSGRVGAAYAAMIGTMQVNEEVDALTTLGISPIDFLVLPRMLALMFMVPLLTVYADL 278

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
             I+G  +V      +  A + +      +  +   G+         I +    +G   G
Sbjct: 279 MGILGGYVVGVSMLGLSSAEYLNATMQMVSFVHGLIGIAYGTVFGVIIALAGCYQGIRCG 338

Query: 337 VHSNSLGKKVTTCVVQSI 354
             + ++G   TT VVQSI
Sbjct: 339 RSAQAVGLATTTAVVQSI 356


>gi|320103291|ref|YP_004178882.1| hypothetical protein Isop_1750 [Isosphaera pallida ATCC 43644]
 gi|319750573|gb|ADV62333.1| protein of unknown function DUF140 [Isosphaera pallida ATCC 43644]
          Length = 280

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 114/217 (52%), Gaps = 5/217 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+   + +GV  +PVV +     G V++ Q      + G E     +++I  ++E+G +L
Sbjct: 53  LVPNFFTIGVRSLPVVAVTGLFIGMVLSVQSFNSFKEMGLETRLGSVVNISLVKELGPVL 112

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A M+AGR GSA+ AE+G+M++ E+IDA+  +G++ +  L+ PR  A ++ +P LT++A+
Sbjct: 113 AATMLAGRVGSAMAAELGTMRVTEQIDALHALGVNPIAYLVVPRFLACVVLIPALTLVAD 172

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
           F+  +G S V  K   +    ++    S     ++  GL K+ F   AI +++   GF  
Sbjct: 173 FAGALGGSFVSVKMLGVDGYYYWKHSQSFVEPLDVVAGLFKSVFFGAAIALISCHRGFHS 232

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
              +  +G+  T   V S   ++ +D     F+  +G
Sbjct: 233 KGGAEGVGQAATEAFVSSFIAILFLD-----FWLGLG 264


>gi|291615986|ref|YP_003518728.1| YrbE [Pantoea ananatis LMG 20103]
 gi|291151016|gb|ADD75600.1| YrbE [Pantoea ananatis LMG 20103]
 gi|327396238|dbj|BAK13660.1| inner membrane protein YrbE [Pantoea ananatis AJ13355]
          Length = 260

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 119/218 (54%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q+Y +GV  + ++++     G V+  QG   L+ +GAE     L+++  LRE+G ++
Sbjct: 44  LIKQLYSIGVLSLVIIVVSGLFIGMVLGLQGYLVLTTYGAETSLGMLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R ++SPR WA  IS+PLL ++  
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVVSPRFWAGFISMPLLALIFT 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
              I G ++  V WK  D  F  F+S   +     +++   +IK+   A  +  +A+  G
Sbjct: 164 AVGITGGALVGVSWKGIDPGF--FWSAMQNAVDFRSDVVNCIIKSAVFAVTVTWIALFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV +   V+ +D +     F 
Sbjct: 222 YDAIPTSEGISRATTRTVVHASLAVLGLDFVLTALMFG 259


>gi|156935718|ref|YP_001439634.1| hypothetical protein ESA_03587 [Cronobacter sakazakii ATCC BAA-894]
 gi|156533972|gb|ABU78798.1| hypothetical protein ESA_03587 [Cronobacter sakazakii ATCC BAA-894]
          Length = 260

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 138/265 (52%), Gaps = 12/265 (4%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           NL   +G++ +KF + S  +A   GL++ N         +F+     L+RQ+Y VGV  +
Sbjct: 4   NLLASMGQRGLKF-SASFGRA---GLMLFNA---IVGKPEFRKHGPLLVRQLYNVGVLSM 56

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++I+     G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+
Sbjct: 57  IIIIVSGLFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSAL 116

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI--VI 286
            AEIG MK  E++ ++  M +D +R +ISPR WA +ISLPLLT++     + G S+  V 
Sbjct: 117 TAEIGLMKATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGVWGGSLVGVN 176

Query: 287 WKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
           WK  D  F  F+S          ++   LIK+   A  +  +A+  G+     S  + + 
Sbjct: 177 WKGIDAGF--FWSAMQDAVDWRMDLINCLIKSVVFAITVTWIALFNGYDAIPTSAGISRA 234

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV +   V+ +D +     F 
Sbjct: 235 TTRTVVHASLAVLGLDFVLTALMFG 259


>gi|171463508|ref|YP_001797621.1| protein of unknown function DUF140 [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171193046|gb|ACB44007.1| protein of unknown function DUF140 [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 216

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 115/209 (55%), Gaps = 5/209 (2%)

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G SG+    L S + G +++ Q A  + QFGA  F   L ++  +RE+G ++TA+++AGR
Sbjct: 12  GHSGIADRWLGSLLIGVILSFQAAIGMQQFGAVSFVGPLAALDIVREMGPIITAILLAGR 71

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           S +A   EIG+M +N E+DA+ + G      L+  RI A I+  P+LT+ A+  +I  +S
Sbjct: 72  SSAAFAVEIGTMTVNSEVDALVSGG----YFLVVSRILAGILVAPILTLFADIVSIF-SS 126

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           ++    Y IPF  F++   S   + +I +GL+KA      I  +    G   G  + ++G
Sbjct: 127 MLTMLIYGIPFVNFYNGMLSAVDVEDILSGLLKATLFGVVISAMGCLRGMQTGTGAAAVG 186

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
              T  VV SI +++I+D +FA   +  G
Sbjct: 187 ISATRAVVSSIVMIVIVDGIFAFISYKTG 215


>gi|270263239|ref|ZP_06191509.1| hypothetical protein SOD_d02560 [Serratia odorifera 4Rx13]
 gi|270042927|gb|EFA16021.1| hypothetical protein SOD_d02560 [Serratia odorifera 4Rx13]
          Length = 260

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 119/219 (54%), Gaps = 7/219 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           L++QM+ VGV  + ++++     G V+  QG   L+ + AE  S+ +M  L L RE+G +
Sbjct: 44  LLKQMHSVGVQSLLIIMVSGLFIGMVLGLQGYLVLTTYSAEA-SLGMMVALSLLRELGPV 102

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGR+GSA+ AEIG MK  E+I ++  M +D +R +++PR WA +IS+PLLTI+ 
Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLRRIVAPRFWAGLISMPLLTIIF 162

Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331
               I G SI  V WK  D  F  F+S          ++   L+K+   A  +  +A+  
Sbjct: 163 VAVGIWGGSIVGVDWKGIDSGF--FWSAMQGAVEWRKDLLNCLLKSVVFAITVTWIAIFN 220

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 221 GYDAVPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|255067843|ref|ZP_05319698.1| toluene tolerance ABC efflux transporter, permease [Neisseria sicca
           ATCC 29256]
 gi|255047934|gb|EET43398.1| toluene tolerance ABC efflux transporter, permease [Neisseria sicca
           ATCC 29256]
          Length = 258

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 119/215 (55%), Gaps = 3/215 (1%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215
           +RQ+Y+ GV  V +V +     G V+  QG  QLS+F  A+I    + + L LRE+G +L
Sbjct: 43  VRQVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASL-LRELGPVL 101

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ A  +G A+ +EIG MK  E+++A+  M ++ V  +++PR WA + S+PLL  + N
Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFN 161

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
            + I GA +V   +  +   +F+S+  +  T+  ++  GLIK+     A+ ++A+ +GF 
Sbjct: 162 VAGIYGAYLVGVTWLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFH 221

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               S  + +  T  VV S   ++ ID +     F
Sbjct: 222 CVPTSEGILRASTRTVVSSALTILAIDFVLTALMF 256


>gi|261364829|ref|ZP_05977712.1| toluene tolerance ABC efflux transporter, permease [Neisseria
           mucosa ATCC 25996]
 gi|288566867|gb|EFC88427.1| toluene tolerance ABC efflux transporter, permease [Neisseria
           mucosa ATCC 25996]
          Length = 258

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 119/215 (55%), Gaps = 3/215 (1%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215
           +RQ+Y+ GV  V +V +     G V+  QG  QLS+F  A+I    + + L LRE+G +L
Sbjct: 43  VRQVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASL-LRELGPVL 101

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ A  +G A+ +EIG MK  E+++A+  M ++ V  +++PR WA + S+PLL  + N
Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFN 161

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
            + I GA +V   +  +   +F+S+  +  T+  ++  GLIK+     A+ ++A+ +GF 
Sbjct: 162 VAGIYGAYLVGVTWLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFH 221

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               S  + +  T  VV S   ++ ID +     F
Sbjct: 222 CVPTSEGILRASTRTVVSSALTILAIDFVLTALMF 256


>gi|229521585|ref|ZP_04411003.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae TM 11079-80]
 gi|229341179|gb|EEO06183.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae TM 11079-80]
          Length = 263

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 116/216 (53%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y +GV  + ++I+     G V++ QG   L  +GAE     ++++  LRE+G ++
Sbjct: 47  LVRQLYSIGVQSLAIIIVSGLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVV 106

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D ++ +I+PR WA +IS+PLL ++  
Sbjct: 107 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFM 166

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              + G  +V   +  I    F+S   ++  L  +I    IK    A  +  +A+  G+ 
Sbjct: 167 AVGVWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYD 226

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV S   V+ +D +     F 
Sbjct: 227 AIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 262


>gi|308814916|dbj|BAJ22980.1| L-glutamate ABC transporter [Neisseria meningitidis]
          Length = 258

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 120/215 (55%), Gaps = 3/215 (1%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215
           +RQ+Y+ GV  V +V +     G V+  QG  QLS+F  A+I    + + L LRE+G +L
Sbjct: 43  VRQVYFAGVLSVLIVAVSGMFVGIVLGLQGYTQLSKFKSADILGYMVAASL-LRELGPVL 101

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ A  +G A+ +EIG MK  E+++A+  M ++ V  +++PR WA + S+PLL  + N
Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFN 161

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
            + I GA +V   +  +   +F+S+  +  T+  ++  GLIK+     A+ ++A+ +GF 
Sbjct: 162 VAGIFGAYLVGVSWLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFH 221

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               S  + +  T  VV S   ++ +D +   + F
Sbjct: 222 CVPTSEGILRASTRTVVSSALTILAVDFILTAWMF 256


>gi|325266930|ref|ZP_08133601.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Kingella denitrificans
           ATCC 33394]
 gi|324981671|gb|EGC17312.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Kingella denitrificans
           ATCC 33394]
          Length = 257

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 119/215 (55%), Gaps = 3/215 (1%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215
           +RQMY+ GV  V ++ +     G VI  QG  QL++F  A++    + + L LRE+G +L
Sbjct: 43  VRQMYFSGVMSVLIIAVSGLFVGMVIGLQGYTQLAKFKSADVLGFMVAASL-LRELGPVL 101

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ A  +G A+ +EIG MK  E+++A+  M ++ V  +++PR WA ++S+PLL  + N
Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVLSMPLLACIFN 161

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
            + I G  +V  ++  +   VF+S   +   +  ++  GL+K+     A+ ++A+ +GF 
Sbjct: 162 VAGIYGGYLVGVQWLGLDSGVFWSNMQNNIDVVYDVGNGLLKSLIFGTAVSLIAVYQGFH 221

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               +  + +  T  VV S   V+ +D +   F F
Sbjct: 222 CTPTAEGILRASTRTVVSSALTVLALDFILTAFMF 256


>gi|312888063|ref|ZP_07747647.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM
           18603]
 gi|311299544|gb|EFQ76629.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM
           18603]
          Length = 256

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 120/225 (53%)

Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198
           TG F +   K +  +  L+ Q Y +G    P+V L  F+ G V+  Q    L  +G +  
Sbjct: 21  TGHFFSRGIKPRFEIKELLAQCYLIGYKSFPLVGLTGFIMGLVLTMQLRPSLVVYGVQSE 80

Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258
              ++ I  +REIG ++TA++ AG+ GS+I AE+GSMK+ E+IDA+   G +  + L++ 
Sbjct: 81  LPVMVGIAIVREIGPVITALIFAGKIGSSIGAELGSMKVTEQIDAMDVSGTNPFKYLVAT 140

Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318
           R+ A  + LP+LT+L +  ++ GA I +          FF++   + T ++I   +IK  
Sbjct: 141 RVVATTLMLPVLTLLGDAISLFGAYIGVNINAVTSVRFFFTQVFQSLTYSDIVPAIIKTL 200

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
           F   A+GI+   +GF     +  +G    + VV S  ++ +ID L
Sbjct: 201 FFGFAVGIIGCYKGFNSTKGTQGVGNSANSAVVLSSVVIFVIDLL 245


>gi|262401810|ref|ZP_06078375.1| uncharacterized ABC transporter permease component YrbE [Vibrio sp.
           RC586]
 gi|262351782|gb|EEZ00913.1| uncharacterized ABC transporter permease component YrbE [Vibrio sp.
           RC586]
          Length = 263

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 120/232 (51%), Gaps = 2/232 (0%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G         + F L L+RQ+Y +GV  + ++++     G V++ QG   L  +GAE   
Sbjct: 32  GALVGRPQPIRNFPL-LVRQLYSIGVQSLAIIMVSGLFIGMVLSLQGYVILVDYGAETSL 90

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
             ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK  E++ ++  M +D ++ +I+PR
Sbjct: 91  GQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPR 150

Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAP 318
            WA +IS+PLL ++     I G  +V   +  I    F+S   ++  L  +I    IK  
Sbjct: 151 FWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCV 210

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             A  +  +A+  G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 211 VFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 262


>gi|332172346|gb|AEE21600.1| protein of unknown function DUF140 [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 259

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 121/216 (56%), Gaps = 1/216 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I+Q+Y VGV  + ++++     G V+A QG   L  +GAE     ++++  LRE+G ++T
Sbjct: 43  IKQIYVVGVQSLLIIVVSGLFIGMVMALQGYTILVGYGAEGSLGPMVALSLLRELGPVVT 102

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +++PR+WA IIS+P+L I+ + 
Sbjct: 103 ALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRIVAPRLWAGIISMPMLAIIFSA 162

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             I+G  +V   +  +    ++S   S+     ++  G+IK    A  I  +A+ +G+  
Sbjct: 163 VGILGGHVVGVDWLGVDAGSYWSIMQSSVDWNEDVVNGIIKTFVFAFVITWIAIFKGYDA 222

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
              S  + K  T  VV S   V+ +D +     F I
Sbjct: 223 IPTSEGISKATTETVVFSSLAVLGLDFILTALMFGI 258


>gi|283836259|ref|ZP_06356000.1| toluene tolerance ABC efflux transporter, permease [Citrobacter
           youngae ATCC 29220]
 gi|291067623|gb|EFE05732.1| toluene tolerance ABC efflux transporter, permease [Citrobacter
           youngae ATCC 29220]
          Length = 260

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 118/218 (54%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LIRQ+Y VGV  + ++I+     G V+  QG   L+ + AE     L+++  LRE+G ++
Sbjct: 44  LIRQLYNVGVLSMLIIIVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ AGR+GSA+ AEIG M+  E++ ++  M +D +R +ISPR WA +ISLPLLTI+  
Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSLEMMAVDPLRRVISPRFWAGVISLPLLTIIFV 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEG 332
              I G S+  V WK  D  F  F+S   +      ++   LIK+   A  +  +A+  G
Sbjct: 164 AVGIWGGSLVGVSWKGIDAGF--FWSAMQNAVDWRLDLVNCLIKSVVFAITVTWIALFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV +   V+ +D +     F 
Sbjct: 222 YDAIPTSAGISRATTRTVVHASLAVLGLDFVLTALMFG 259


>gi|238793703|ref|ZP_04637325.1| hypothetical protein yinte0001_800 [Yersinia intermedia ATCC 29909]
 gi|238726944|gb|EEQ18476.1| hypothetical protein yinte0001_800 [Yersinia intermedia ATCC 29909]
          Length = 260

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 118/218 (54%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y VGV  + ++++     G V+  QG   L+ + AE     ++S+  LRE+G ++
Sbjct: 44  LVKQLYSVGVQSLLIIVVSGLFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E+I ++  M +D +R +++PR WA +IS+PLLT +  
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFV 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
              I G S+  V WK  D  F  F+S   +      ++   LIK+   A  +  +A+  G
Sbjct: 164 AVGIWGGSVVGVDWKGIDGGF--FWSAMQNAVEWRTDLLNCLIKSLVFAITVTWIALFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV S   V+ +D +     F 
Sbjct: 222 YDAVPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|237730114|ref|ZP_04560595.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226908720|gb|EEH94638.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 260

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 118/218 (54%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LIRQ+Y VGV  + ++I+     G V+  QG   L+ + AE     L+++  LRE+G ++
Sbjct: 44  LIRQLYNVGVLSMLIIIVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ AGR+GSA+ AEIG M+  E++ ++  M +D +R +ISPR WA +ISLPLLTI+  
Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSLEMMAVDPLRRVISPRFWAGVISLPLLTIIFV 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEG 332
              I G S+  V WK  D  F  F+S   +      ++   LIK+   A  +  +A+  G
Sbjct: 164 AVGIWGGSLVGVSWKGIDAGF--FWSAMQNAVDWRLDLVNCLIKSVVFAITVTWIALFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV +   V+ +D +     F 
Sbjct: 222 YDAIPTSAGISRATTRTVVHASLAVLGLDFVLTALMFG 259


>gi|118594041|ref|ZP_01551388.1| hypothetical protein MB2181_00195 [Methylophilales bacterium
           HTCC2181]
 gi|118439819|gb|EAV46446.1| hypothetical protein MB2181_00195 [Methylophilales bacterium
           HTCC2181]
          Length = 261

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 118/214 (55%), Gaps = 1/214 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           IR++Y+ GV  + ++I+ +F  G V+  QG + L ++G+      L+++  +RE+G ++T
Sbjct: 47  IREIYFTGVLSLVIIIVSAFFVGMVLGLQGYYTLEKYGSSEAIGVLVALALVRELGPVVT 106

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+G+AI AEIG MK  E++ A+  M +  V  +I+PR WA +IS+P+L  + + 
Sbjct: 107 ALLFAGRAGTAITAEIGLMKATEQLSAMEVMAVSPVARIIAPRFWAGMISMPILATIFSM 166

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFAV 335
             I+G   +      +    F+S+  +    +N I  G IK+     A  I+A+ EGF  
Sbjct: 167 VGILGGYFIAVLVIGVDEGAFWSQMQANVDFSNDIVDGAIKSIVFGFACTIIALFEGFDA 226

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              +  + +  T  VV S   V+ +D +   F F
Sbjct: 227 PPTAEGVSRATTRTVVISSLAVLGLDFILTSFMF 260


>gi|294086102|ref|YP_003552862.1| hypothetical protein SAR116_2535 [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292665677|gb|ADE40778.1| Protein of unknown function DUF140 [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 266

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 119/203 (58%)

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G+  +PVVIL++   G +++ QG   L  FGAE      +++   RE   L+T +++AGR
Sbjct: 62  GIDALPVVILMAATIGIMLSIQGVHSLRIFGAESQVTFGLALSIPREFAPLITGIIVAGR 121

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           SGS + + +GSM++N E+DA++ MG+  +R +++P + AL+ +LP+L  +AN SA   AS
Sbjct: 122 SGSQLTSRVGSMQLNGELDALKVMGISPIRFVVAPALVALLFALPILVAIANVSAFWTAS 181

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           + I     I  A +++   +  T+ ++  G  KA   A  I ++ + +G  V   ++ LG
Sbjct: 182 LYIDAVLGIAPAAYWADILAVVTITDLIHGFGKAIIFAVLIALIGICKGLRVSGGADRLG 241

Query: 344 KKVTTCVVQSISIVIIIDSLFAI 366
              T+ VV  I+ +I  D++FA+
Sbjct: 242 AATTSSVVSCIAAIIAADAMFAL 264


>gi|262170539|ref|ZP_06038217.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           mimicus MB-451]
 gi|261891615|gb|EEY37601.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           mimicus MB-451]
          Length = 263

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 120/232 (51%), Gaps = 2/232 (0%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G         + F L L+RQ+Y +GV  + ++++     G V++ QG   L  +GAE   
Sbjct: 32  GALVGRPQPIRNFPL-LVRQLYSIGVQSLAIIMVSGLFIGMVLSLQGYVILVDYGAETSL 90

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
             ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK  E++ ++  M +D ++ +I+PR
Sbjct: 91  GQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPR 150

Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAP 318
            WA +IS+PLL ++     I G  +V   +  I    F+S   ++  L  +I    IK  
Sbjct: 151 FWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCV 210

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             A  +  +A+  G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 211 VFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 262


>gi|258622787|ref|ZP_05717805.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258625813|ref|ZP_05720692.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|262166549|ref|ZP_06034286.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           mimicus VM223]
 gi|258582051|gb|EEW06921.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|258584975|gb|EEW09706.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|262026265|gb|EEY44933.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           mimicus VM223]
          Length = 258

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 120/232 (51%), Gaps = 2/232 (0%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G         + F L L+RQ+Y +GV  + ++++     G V++ QG   L  +GAE   
Sbjct: 27  GALVGRPQPIRNFPL-LVRQLYSIGVQSLAIIMVSGLFIGMVLSLQGYVILVDYGAETSL 85

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
             ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK  E++ ++  M +D ++ +I+PR
Sbjct: 86  GQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPR 145

Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAP 318
            WA +IS+PLL ++     I G  +V   +  I    F+S   ++  L  +I    IK  
Sbjct: 146 FWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCV 205

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             A  +  +A+  G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 206 VFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 257


>gi|110639360|ref|YP_679569.1| ABC transporter permease [Cytophaga hutchinsonii ATCC 33406]
 gi|110282041|gb|ABG60227.1| ABC transporter, permease [Cytophaga hutchinsonii ATCC 33406]
          Length = 263

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 109/207 (52%)

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           L  +I Q Y VG+  +P++ L  FVTG V  +Q    L  FGA  +   L+SI  +R +G
Sbjct: 42  LRQVIDQCYEVGIKSLPLITLTGFVTGLVFTKQSRPSLEVFGATSWLPSLISIALVRALG 101

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            L+TA++ AG+ GS+I AE+GSMK+ E+IDA+    ++  + L+  R+ A    + +L+ 
Sbjct: 102 PLVTALICAGKVGSSIGAELGSMKVTEQIDAMEVSAINPFKYLVVTRVLATTFMVSILSF 161

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
             +   ++GA + +       FA FF    S     +IF+ + K+      IGIV   +G
Sbjct: 162 YCSLVGLLGAFVNVHANDTTSFANFFQSGFSDINFIDIFSSVTKSLVFGFTIGIVGCYKG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVII 359
           F     +  +GK     VV ++ ++ +
Sbjct: 222 FNATQGTRGVGKAANQAVVTAMFLIFV 248


>gi|238785100|ref|ZP_04629095.1| hypothetical protein yberc0001_210 [Yersinia bercovieri ATCC 43970]
 gi|238796191|ref|ZP_04639701.1| hypothetical protein ymoll0001_34470 [Yersinia mollaretii ATCC
           43969]
 gi|238713992|gb|EEQ06009.1| hypothetical protein yberc0001_210 [Yersinia bercovieri ATCC 43970]
 gi|238719884|gb|EEQ11690.1| hypothetical protein ymoll0001_34470 [Yersinia mollaretii ATCC
           43969]
          Length = 260

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 118/218 (54%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y VGV  + ++++     G V+  QG   L+ + AE     ++S+  LRE+G ++
Sbjct: 44  LVKQLYSVGVQSLLIIVVSGLFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E+I ++  M +D +R +++PR WA +IS+PLLT +  
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFV 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
              I G S+  V WK  D  F  F+S   +      ++   LIK+   A  +  +A+  G
Sbjct: 164 AVGIWGGSVVGVDWKGIDGGF--FWSAMQNAVEWRTDLLNCLIKSLVFAITVTWIALFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV S   V+ +D +     F 
Sbjct: 222 YDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|323498697|ref|ZP_08103687.1| hypothetical protein VISI1226_21911 [Vibrio sinaloensis DSM 21326]
 gi|323316253|gb|EGA69274.1| hypothetical protein VISI1226_21911 [Vibrio sinaloensis DSM 21326]
          Length = 262

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 117/216 (54%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y VGV  + +++L     G V++ QG   L  FGAE     ++++  LRE+G ++
Sbjct: 46  LVKQLYSVGVQSLLIIVLSGLFIGMVLSLQGYVILIDFGAEGALGQMVALSLLRELGPVV 105

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D ++ +I+PR WA +IS+PLL ++  
Sbjct: 106 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLKRVIAPRFWAGVISMPLLAMIFM 165

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G   V   +  I    F+S   ++  L  +I   +IK+   A  +  +A+  G+ 
Sbjct: 166 AVGIWGGQSVGVDWKGIDHGSFWSTMQASVELGQDIGNSMIKSLVFAITVTWIALFNGYD 225

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV S   V+ +D +     F 
Sbjct: 226 AIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 261


>gi|261401680|ref|ZP_05987805.1| toluene tolerance ABC efflux transporter, permease [Neisseria
           lactamica ATCC 23970]
 gi|269208206|gb|EEZ74661.1| toluene tolerance ABC efflux transporter, permease [Neisseria
           lactamica ATCC 23970]
          Length = 258

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 120/215 (55%), Gaps = 3/215 (1%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215
           +RQ+Y+ GV  V +V +     G V+  QG  QLS+F  A+I    + + L LRE+G +L
Sbjct: 43  VRQVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASL-LRELGPVL 101

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ A  +G A+ +EIG MK  E+++A+  M ++ V  +++PR WA + S+PLL  + N
Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFN 161

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
            + I GA +V   +  +   +F+S+  +  T+  ++  GLIK+     A+ ++A+ +GF 
Sbjct: 162 VAGIFGAYLVGVTWLGLDSGIFWSQMQNNITIHYDVINGLIKSVAFGVAVTLIAVHQGFH 221

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               S  + +  T  VV S   ++ +D +   + F
Sbjct: 222 CVPTSEGILRASTRTVVSSALTILAVDFILTAWMF 256


>gi|149190595|ref|ZP_01868864.1| putative ABC superfamily transport protein [Vibrio shilonii AK1]
 gi|148835593|gb|EDL52561.1| putative ABC superfamily transport protein [Vibrio shilonii AK1]
          Length = 262

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 117/216 (54%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q++ VGV  + ++++     G V++ QG   L  +GAE     ++++  LRE+G ++
Sbjct: 46  LIKQLHNVGVQSLAIIMVSGLFIGMVLSLQGYVVLVDYGAEGSLGQMVALSLLRELGPVV 105

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D ++ +ISPR WA +IS+PLL ++  
Sbjct: 106 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLKRVISPRFWAGVISMPLLAMIFM 165

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G  +V   +  I    F+S   S+  L  +I   +IK    A  +  +A+  G+ 
Sbjct: 166 AIGIWGGQLVGVDWKGIDHGSFWSAMQSSVELGRDIGNSVIKCLVFAITVTWIALFNGYD 225

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV S   V+ +D +     F 
Sbjct: 226 AIPTSEGISQATTRTVVHSSLAVLGLDFVLTALMFG 261


>gi|74317917|ref|YP_315657.1| hypothetical protein Tbd_1899 [Thiobacillus denitrificans ATCC
           25259]
 gi|74057412|gb|AAZ97852.1| Protein of unknown function DUF140 [Thiobacillus denitrificans ATCC
           25259]
          Length = 262

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 121/226 (53%), Gaps = 2/226 (0%)

Query: 145 SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204
           S   F+ F L+ +R++Y+ GV  + ++++     G V+  QG   L  +G+E     L++
Sbjct: 34  SGTAFRRFGLT-VRELYFTGVLSLIIILVSGLFVGMVLGLQGYETLQTYGSEEALGILVA 92

Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264
           +  +RE+G ++ A++ A R+GSAI AEIG MK  E++ A+  M +D +  +++PR WA +
Sbjct: 93  LSLVRELGPVVAALLFASRAGSAITAEIGLMKATEQLSAMEMMAVDPIARVVAPRFWAGV 152

Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACA 323
           IS+PLL  L +   + G  +V  +   +    F+S+  S      +I  G+IK+     A
Sbjct: 153 ISMPLLAALFSAMGVFGGYLVGVQLIGVDEGAFWSQMQSAVDFEQDILNGVIKSVVFGVA 212

Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           I  +A+ EG+     +  + +  T  VV S   V+ +D +   F F
Sbjct: 213 ITAIALFEGYDAPPTAEGVSRATTRTVVTSSLAVLALDFVLTAFMF 258


>gi|302036847|ref|YP_003797169.1| putative ABC transporter permease [Candidatus Nitrospira defluvii]
 gi|300604911|emb|CBK41244.1| putative ABC transporter, permease component [Candidatus Nitrospira
           defluvii]
          Length = 291

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 107/206 (51%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+ + GV  +PV  +I+ + G +I  Q   QL + GA      ++ +  +RE+G L+
Sbjct: 77  LVRQILFTGVDALPVTTVIALLLGIIIVTQAGTQLPRLGAGGLVGSIIVVTVIRELGPLI 136

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA ++ GRSG+AI  E+G+M +  E+ A+R MG+   R +I PR+  +++S+  LT+  +
Sbjct: 137 TAFIVVGRSGTAIATELGNMSVTREVVALRLMGISISRFVIMPRMVGMVLSMLCLTLYFD 196

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             A++G  ++      IPF  F        +  ++    IK      A+  +    G AV
Sbjct: 197 VVAVLGGYLIADAQLTIPFYAFVESITKALSTTDVLMTAIKGLSFGSAVAAICCYHGLAV 256

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361
                 + ++ T  ++ S  + ++ID
Sbjct: 257 RSSFTEVPQQTTRAMINSFVLCLLID 282


>gi|148265726|ref|YP_001232432.1| hypothetical protein Gura_3706 [Geobacter uraniireducens Rf4]
 gi|146399226|gb|ABQ27859.1| protein of unknown function DUF140 [Geobacter uraniireducens Rf4]
          Length = 258

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 114/209 (54%), Gaps = 2/209 (0%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           S+  QM  +G   +PV  +++F  G V+A Q   +L ++G++     ++    +RE+G +
Sbjct: 42  SIFAQMAIIGYETLPVASVMAFFVGMVLALQTGVELQKYGSQNIIGAIVGHSMVRELGPV 101

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +T+ ++AGR+GSA+ AE+G M + EEIDA++T+ ++ VR L  PR  A I+ LP L I +
Sbjct: 102 MTSFLVAGRAGSAMAAELGVMTVYEEIDALKTLDINPVRYLAMPRFIACIVCLPALVIYS 161

Query: 275 NFSAIIGASIV--IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           +F  I G +I+  +     + ++ ++    +      I  GLIKA      I +V+   G
Sbjct: 162 DFIGITGGAIISNLHPKIFVSYSTYYDSLTAALKFHEIGIGLIKAFVFGAIIALVSCYIG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           F     +  +G   T  VV S  ++++ D
Sbjct: 222 FKTSGGARGIGISTTRSVVLSFMLILVAD 250


>gi|212711087|ref|ZP_03319215.1| hypothetical protein PROVALCAL_02156 [Providencia alcalifaciens DSM
           30120]
 gi|212686255|gb|EEB45783.1| hypothetical protein PROVALCAL_02156 [Providencia alcalifaciens DSM
           30120]
          Length = 262

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 118/213 (55%), Gaps = 13/213 (6%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           L++Q+Y VGV  + +V +     G V+  QG   L+ F AE  S+ +M  L L RE+G +
Sbjct: 46  LVKQLYSVGVQSLLIVAVSGLFIGMVLGLQGYLVLTTFSAEA-SLGMMVALSLLRELGPV 104

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGR+GSA+ AEIG MK  E+I ++  M +D +R +++PR WA  IS+PLL+++ 
Sbjct: 105 VTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLRRVVAPRFWAGFISMPLLSLIF 164

Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTAT----LANIFTGLIKAPFMACAIGIVA 328
               IIG +I  V WK  D  F  F+S   S+      L N F   IK+   A  +  +A
Sbjct: 165 VAVGIIGGAIVGVDWKGIDPGF--FWSSMQSSVEWRLDLVNCF---IKSVVFAITVTWIA 219

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           +  G+     S  + +  T  VV +   V+ +D
Sbjct: 220 LFNGYDAIPTSEGISRATTKTVVHASLSVLGLD 252


>gi|317485263|ref|ZP_07944144.1| hypothetical protein HMPREF0179_01497 [Bilophila wadsworthia 3_1_6]
 gi|316923554|gb|EFV44759.1| hypothetical protein HMPREF0179_01497 [Bilophila wadsworthia 3_1_6]
          Length = 265

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 117/213 (54%), Gaps = 5/213 (2%)

Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
           + +++Q+Y +G   + V+ LI+  TG V+  QG + L +FG+  F    +S+  +RE+G 
Sbjct: 44  IKVLQQLYVIGTKSLFVICLIALFTGMVLGLQGYYVLVKFGSVGFLGAAVSLTLIRELGP 103

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           +LTA+M+ GR+GS++ AEIG M+I ++IDA+  M +  +  L++PR  A +I+ PLLT +
Sbjct: 104 VLTAIMVTGRAGSSMAAEIGVMRITDQIDALEVMDIPGMGYLVAPRFVASLIAFPLLTAI 163

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
            +   IIG  +       +    +F    S+  + ++  G IK+   A  I ++   +G+
Sbjct: 164 FDVVGIIGGYLTGVLLLGVNEGAYFHGIESSVLMPDVTEGFIKSFVFALLIALICCYQGY 223

Query: 334 AV-----GVHSNSLGKKVTTCVVQSISIVIIID 361
                  G+   ++    T+ VV S   V++ D
Sbjct: 224 NAHRRRDGMGPEAVANATTSAVVISCVFVLVAD 256


>gi|297569270|ref|YP_003690614.1| protein of unknown function DUF140 [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925185|gb|ADH85995.1| protein of unknown function DUF140 [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 264

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 98/165 (59%)

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           L  +IRQ+  +G + +PV+   +  TG V+  QG + L +FGAE     ++++  +RE+G
Sbjct: 42  LAEVIRQIRLIGANSLPVIFFTAAFTGMVLGLQGYYTLRKFGAEGALGTMVALSLVRELG 101

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            +LTA+M+ GR+GSA+ AEIG M+ +E+IDA+  M +D  R LI+P+  A +IS+PLLT+
Sbjct: 102 PVLTALMVIGRAGSAMCAEIGIMRNSEQIDALECMAVDPFRYLIAPKFLATVISIPLLTM 161

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
           + N   I G  +       +    +F+    +    +I  G IK+
Sbjct: 162 IFNVVGIFGGYLAGVVLLGVNAGSYFAAMEQSVLAQDINMGFIKS 206


>gi|254411230|ref|ZP_05025007.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
           7420]
 gi|196181731|gb|EDX76718.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
           7420]
          Length = 261

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 111/213 (52%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + QM  VG   + + ++ +   GAV   Q   +   FGA      ++++   RE+  +LT
Sbjct: 41  LEQMAVVGPDSLTIALITATFIGAVFTIQVTREFINFGATTAIGGVLALALSRELAPVLT 100

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV+IAGR GSA  AEIG+M++ E+IDA+  +  D +  L+ PR+ A I+ LPLLTIL+  
Sbjct: 101 AVVIAGRVGSAFAAEIGTMRVTEQIDALYMLKTDPIDYLVIPRVIACILMLPLLTILSII 160

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
             + G  ++    Y+IP +VF     +   + ++FT +IKA      I ++    G    
Sbjct: 161 LGMTGGVLIAVNLYNIPQSVFLDSARNFLGIWDLFTAMIKAAVFGMLIAVIGCSWGLTTS 220

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
             +  +G+  TT VV ++  + I +   +   F
Sbjct: 221 GGAKGVGQSTTTAVVTALLAIFITNFFLSWLMF 253


>gi|238756123|ref|ZP_04617444.1| hypothetical protein yruck0001_2780 [Yersinia ruckeri ATCC 29473]
 gi|238705662|gb|EEP98058.1| hypothetical protein yruck0001_2780 [Yersinia ruckeri ATCC 29473]
          Length = 260

 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 117/218 (53%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y VGV  + ++++     G V+  QG   L+ + AE     ++S+  LRE+G ++
Sbjct: 44  LVKQLYSVGVQSLLIIMVSGLFIGMVLGLQGYLILTTYSAEASLGMMVSLSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E+I ++  M +D +R +++PR WA +IS+PLLT +  
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFV 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
              I G S+  V WK  D  F  F+S          ++   LIK+   A  +  +A+  G
Sbjct: 164 AVGIWGGSVVGVDWKGIDSGF--FWSAMQGAVEWRTDLLNCLIKSLVFAITVTWIALFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV S   V+ +D +     F 
Sbjct: 222 YDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|311277833|ref|YP_003940064.1| hypothetical protein Entcl_0502 [Enterobacter cloacae SCF1]
 gi|308747028|gb|ADO46780.1| protein of unknown function DUF140 [Enterobacter cloacae SCF1]
          Length = 260

 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 118/218 (54%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y VGV  + ++I+     G V+  QG   L+ + AE     L+++  LRE+G ++
Sbjct: 44  LVRQLYNVGVLSMLIIIVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ AGR+GSA+ AEIG M+  E++ ++  M +D +R +ISPR WA +ISLPLLTI+  
Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFV 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
              I G S+  V WK  D  F  F++   +      ++   LIK+   A  +  +A+  G
Sbjct: 164 AVGIWGGSLVGVSWKGIDAGF--FWTAMQNAVEWRMDLVNCLIKSVVFAITVTWIALFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV S   V+ +D +     F 
Sbjct: 222 YDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|292670497|ref|ZP_06603923.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Selenomonas noxia ATCC 43541]
 gi|292647907|gb|EFF65879.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Selenomonas noxia ATCC 43541]
          Length = 310

 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 114/215 (53%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           S+I QM ++G   + +V L    TG V+  Q A +  ++GA+     +++I   RE+G +
Sbjct: 96  SIIYQMAHLGADSLLIVGLTLLFTGVVLTLQIAHEFIRYGAQSTVGAVIAIGIGRELGPV 155

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           L  V+ AGR G+AI AE+ +MK+ E+IDA+R M +  V  LI PR+ A ++ +P+LT+  
Sbjct: 156 LVGVVCAGRVGAAITAEVSTMKVTEQIDALRVMAVSPVNYLIVPRMLACMVVVPILTVFG 215

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
           +   ++G  +    Y  I    F +     A + ++  GLIKA F    I ++    G  
Sbjct: 216 DVIGVLGGYLTAVYYSGISAYTFTNSITQFALIYDMTGGLIKAIFFGNVIAVLGCHYGLN 275

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               +  +GK     VV SI ++ I++++   F F
Sbjct: 276 APSGAEGVGKATMHTVVTSIIVIFILNAVLTFFLF 310


>gi|197119107|ref|YP_002139534.1| transporter membrane protein [Geobacter bemidjiensis Bem]
 gi|197088467|gb|ACH39738.1| transporter membrane protein of unknown function DUF140 [Geobacter
           bemidjiensis Bem]
          Length = 258

 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 114/209 (54%), Gaps = 2/209 (0%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           S++ QM  +G   +PV  +++F  G V+A Q   +L ++G +     ++    +RE+G +
Sbjct: 42  SILTQMAVIGWDTLPVASVMAFFVGMVLALQTGVELQKYGGQNIIGAIVGHSMVRELGPV 101

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +T+ ++AGR GSA+ AE+G M + EEIDA++T+ +D VR L  PR  A I+ +P L I +
Sbjct: 102 MTSFLVAGRCGSAMAAELGVMTVYEEIDALKTLDIDPVRYLAMPRFIACIVCVPALVIYS 161

Query: 275 NFSAIIGASIVIWKYYDI--PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           +   IIG +++   +  I   +A ++        +  I  GL K+      I +V+   G
Sbjct: 162 DVIGIIGGALISNLHPQIFVSYATYYDSLTDALKIKEIGIGLTKSVAFGSIIALVSCYVG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           F+    +  +G+  T  VV S  ++++ D
Sbjct: 222 FSTSGGARGIGQSTTRSVVLSFMLILVAD 250


>gi|156975891|ref|YP_001446798.1| hypothetical protein VIBHAR_03657 [Vibrio harveyi ATCC BAA-1116]
 gi|156527485|gb|ABU72571.1| hypothetical protein VIBHAR_03657 [Vibrio harveyi ATCC BAA-1116]
          Length = 263

 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 117/216 (54%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q+Y VGV  + ++++     G V++ QG   L  +GAE     ++++  LRE+G ++
Sbjct: 47  LIKQLYSVGVQSLAIIVVSGLFIGMVLSLQGYVVLVDYGAEGSLGQMVALSLLRELGPVV 106

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D ++ +I+PR WA  IS+PLL ++  
Sbjct: 107 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGAISMPLLAMIFM 166

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I GA +V   +  +    F++   S+  L  +I   +IK    A  +  +A+  G+ 
Sbjct: 167 AVGIWGAQLVGVDWKGVDHGSFWAAMQSSVELGQDIGNSMIKCIVFAITVTWIALFNGYD 226

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV S   V+ +D +     F 
Sbjct: 227 AIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 262


>gi|269797585|ref|YP_003311485.1| hypothetical protein Vpar_0522 [Veillonella parvula DSM 2008]
 gi|282850033|ref|ZP_06259415.1| conserved hypothetical protein [Veillonella parvula ATCC 17745]
 gi|269094214|gb|ACZ24205.1| protein of unknown function DUF140 [Veillonella parvula DSM 2008]
 gi|282580222|gb|EFB85623.1| conserved hypothetical protein [Veillonella parvula ATCC 17745]
          Length = 253

 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 112/212 (52%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +QM ++GV  +P++ L     GAV+  Q    L  +GA+     LM++   RE+G +L  
Sbjct: 42  QQMAHLGVDSLPIISLTLLFAGAVMTLQITDVLITYGAQSTVGGLMAVAMGRELGPILVG 101

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           V++AGR G+AI AEIG+MK+ E+IDA+R M +D V  L+ PR+ A +I +P+L       
Sbjct: 102 VVLAGRVGAAITAEIGTMKVTEQIDALRVMAVDPVGYLVVPRVVACMIMVPILAFYGVVI 161

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            I G   V      +  + +       +T+++   GLIK+      I +V   +G    +
Sbjct: 162 GIAGGYFVATVIKGLAPSTYLDSIQMFSTISDFTLGLIKSSVFGAVIALVGAYKGMETKM 221

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
            + ++G   T+ VV SI +V +++   +   F
Sbjct: 222 GAEAVGFSTTSSVVTSIILVFVLNYFLSTLLF 253


>gi|16762074|ref|NP_457691.1| hypothetical protein STY3491 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|16766607|ref|NP_462222.1| transport protein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|29143563|ref|NP_806905.1| hypothetical protein t3229 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56415241|ref|YP_152316.1| hypothetical protein SPA3179 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|62181820|ref|YP_218237.1| ABC transporter membrane protein [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161616322|ref|YP_001590287.1| hypothetical protein SPAB_04130 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167552038|ref|ZP_02345791.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|167994505|ref|ZP_02575596.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168231923|ref|ZP_02656981.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|168238014|ref|ZP_02663072.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|168243148|ref|ZP_02668080.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|168262675|ref|ZP_02684648.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|168463462|ref|ZP_02697379.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|168819618|ref|ZP_02831618.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|194443328|ref|YP_002042570.1| toluene ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194449369|ref|YP_002047341.1| toluene ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194470890|ref|ZP_03076874.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|194737604|ref|YP_002116262.1| toluene ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197251770|ref|YP_002148237.1| toluene ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197262344|ref|ZP_03162418.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|197364171|ref|YP_002143808.1| hypothetical protein SSPA2967 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|200388463|ref|ZP_03215075.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|204931189|ref|ZP_03221983.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|205354213|ref|YP_002228014.1| hypothetical protein SG3202 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207858560|ref|YP_002245211.1| hypothetical protein SEN3145 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|213163395|ref|ZP_03349105.1| hypothetical protein Salmoneentericaenterica_26575 [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213420406|ref|ZP_03353472.1| hypothetical protein Salmonentericaenterica_22736 [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
 gi|213426645|ref|ZP_03359395.1| hypothetical protein SentesTyphi_14148 [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213618602|ref|ZP_03372428.1| hypothetical protein SentesTyp_19883 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213646981|ref|ZP_03377034.1| hypothetical protein SentesTy_06536 [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213857745|ref|ZP_03384716.1| hypothetical protein SentesT_21720 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|224585109|ref|YP_002638908.1| hypothetical protein SPC_3382 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|238910106|ref|ZP_04653943.1| hypothetical protein SentesTe_03070 [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|289825822|ref|ZP_06544990.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-3139]
 gi|25319166|pir||AG0904 probable membrane protein STY3491 [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16421869|gb|AAL22181.1| putative ABC superfamily transport protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|16504377|emb|CAD07829.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29139198|gb|AAO70765.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56129498|gb|AAV79004.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|62129453|gb|AAX67156.1| putative ABC superfamily (membr) transport protein [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|161365686|gb|ABX69454.1| hypothetical protein SPAB_04130 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401991|gb|ACF62213.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194407673|gb|ACF67892.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|194457254|gb|EDX46093.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|194713106|gb|ACF92327.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|195633368|gb|EDX51782.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|197095648|emb|CAR61216.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197215473|gb|ACH52870.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|197240599|gb|EDY23219.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|197289146|gb|EDY28515.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|199605561|gb|EDZ04106.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|204319956|gb|EDZ05162.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|205273994|emb|CAR39000.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205323252|gb|EDZ11091.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|205327645|gb|EDZ14409.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205333943|gb|EDZ20707.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|205337808|gb|EDZ24572.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|205343404|gb|EDZ30168.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|205348318|gb|EDZ34949.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|206710363|emb|CAR34721.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224469637|gb|ACN47467.1| hypothetical protein SPC_3382 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261248477|emb|CBG26314.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267995511|gb|ACY90396.1| putative transport protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301159861|emb|CBW19380.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312914339|dbj|BAJ38313.1| toluene ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. T000240]
 gi|320087757|emb|CBY97521.1| UPF0393 inner membrane protein yrbE [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321225264|gb|EFX50323.1| Uncharacterized ABC transporter, permease component YrbE
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. TN061786]
 gi|322615316|gb|EFY12237.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322618325|gb|EFY15216.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322622870|gb|EFY19714.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322626808|gb|EFY23605.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322631377|gb|EFY28137.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322635356|gb|EFY32070.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322643355|gb|EFY39919.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322647073|gb|EFY43574.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322648876|gb|EFY45321.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322655068|gb|EFY51379.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322657671|gb|EFY53939.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322664167|gb|EFY60365.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322667450|gb|EFY63612.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674698|gb|EFY70790.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322675669|gb|EFY71742.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322682305|gb|EFY78328.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322684908|gb|EFY80906.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|322716309|gb|EFZ07880.1| putative phospholipid ABC transporter permease protein mlaE
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
 gi|323131672|gb|ADX19102.1| putative transport protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|323195887|gb|EFZ81058.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323199004|gb|EFZ84101.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323204296|gb|EFZ89305.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323207643|gb|EFZ92590.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323211304|gb|EFZ96148.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323214754|gb|EFZ99503.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323221234|gb|EGA05660.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323224025|gb|EGA08318.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323230326|gb|EGA14445.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323233302|gb|EGA17396.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323239339|gb|EGA23389.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323242410|gb|EGA26436.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323246920|gb|EGA30886.1| toluene transporter subunit: membrane component of ABC superfamily
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2009159199]
 gi|323254147|gb|EGA37967.1| toluene transporter subunit: membrane component of ABC superfamily
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008282]
 gi|323255264|gb|EGA39041.1| toluene transporter subunit: membrane component of ABC superfamily
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008283]
 gi|323262727|gb|EGA46283.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323264037|gb|EGA47545.1| toluene transporter subunit: membrane component of ABC superfamily
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008285]
 gi|323269423|gb|EGA52878.1| toluene transporter subunit: membrane component of ABC superfamily
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008287]
 gi|326625062|gb|EGE31407.1| putative phospholipid ABC transporter permease protein mlaE
           [Salmonella enterica subsp. enterica serovar Dublin str.
           3246]
 gi|326629335|gb|EGE35678.1| Putative membrane protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 260

 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 118/218 (54%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y VGV  + ++I+     G V+  QG   L+ + AE     L+++  LRE+G ++
Sbjct: 44  LVRQLYNVGVLSMLIIIVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ AGR+GSA+ AEIG M+  E++ ++  M +D +R +ISPR WA +ISLPLLTI+  
Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFV 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
              I G S+  V WK  D  F  F+S   +      ++   LIK+   A  +  +A+  G
Sbjct: 164 AVGIWGGSLVGVSWKGIDAGF--FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWIALFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV +   V+ +D +     F 
Sbjct: 222 YDAIPTSAGISRATTRTVVHASLAVLGLDFVLTALMFG 259


>gi|253700132|ref|YP_003021321.1| hypothetical protein GM21_1507 [Geobacter sp. M21]
 gi|251774982|gb|ACT17563.1| protein of unknown function DUF140 [Geobacter sp. M21]
          Length = 258

 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 114/209 (54%), Gaps = 2/209 (0%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           S++ QM  +G   +PV  +++F  G V+A Q   +L ++G +     ++    +RE+G +
Sbjct: 42  SILTQMAVIGWDTLPVASVMAFFVGMVLALQTGVELQKYGGQNIIGAIVGHSMVRELGPV 101

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +T+ ++AGR GSA+ AE+G M + EEIDA++T+ +D VR L  PR  A I+ +P L I +
Sbjct: 102 MTSFLVAGRCGSAMAAELGVMTVYEEIDALKTLDIDPVRYLAMPRFIACIVCVPALVIYS 161

Query: 275 NFSAIIGASIVIWKYYDI--PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           +   IIG +++   +  I   +A ++        +  I  GL K+      I +V+   G
Sbjct: 162 DVIGIIGGALISNLHPQIFVSYATYYDSLTDALKIREIGIGLTKSVAFGSIIALVSCYVG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           F+    +  +G+  T  VV S  ++++ D
Sbjct: 222 FSTSGGARGIGQSTTRSVVLSFMLILVAD 250


>gi|291532196|emb|CBL05309.1| conserved hypothetical integral membrane protein [Megamonas
           hypermegale ART12/1]
          Length = 256

 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 128/254 (50%), Gaps = 5/254 (1%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +KI +F+           ++I NT     +  ++   +  + +QM ++GV  +P++ L  
Sbjct: 7   EKIGRFVIGHLETLGQFTILIGNT----IAQLRYPPRMRHVFQQMSHLGVDTLPIITLTM 62

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
             TG VI  Q A +  + GA+     +++I   RE+G +L  V+ AGR G+AI AEI +M
Sbjct: 63  LFTGMVITLQTATEFIRLGAQSTVGGIVTIAVGRELGPVLAGVVTAGRVGAAITAEISTM 122

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K+ E+IDA++ M  + +  L+ PR+ A +  LP+L +  +    IG  +V  +YYDI   
Sbjct: 123 KVTEQIDALKVMATNPIGYLVVPRLIACMFMLPILVVFGDVIGSIGGWMV-AEYYDINIY 181

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           ++     +   + +I  GL+K+      I IV    G      +  +GK  T  VV SI 
Sbjct: 182 MYLHSIDTFVDVHDITGGLLKSIVFGAIIAIVGCYYGLNAQNGAEGVGKATTRSVVISII 241

Query: 356 IVIIIDSLFAIFYF 369
           ++   + L ++  +
Sbjct: 242 VIFFSNCLLSMLLY 255


>gi|254442342|ref|ZP_05055818.1| conserved hypothetical protein [Verrucomicrobiae bacterium DG1235]
 gi|198256650|gb|EDY80958.1| conserved hypothetical protein [Verrucomicrobiae bacterium DG1235]
          Length = 260

 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 133/262 (50%), Gaps = 12/262 (4%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           IG++ ++ +++       LG +   + +   +  K +     L R ++ +GV  VP+ ++
Sbjct: 5   IGRQSIRLVSE-------LGELAGFSAQASVALPKQRHIFEKLSRAIFEIGVRCVPITLI 57

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           +   TG V+  Q  + L++F +E      +++  + EIG + TA+MI G++GSA+ AEIG
Sbjct: 58  VGLFTGLVLGLQLYYVLAKFSSESLLGQAVALSIILEIGPVFTAIMIVGQAGSALSAEIG 117

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
             +  E+IDA+ TM +D +  L+SPR+WA II+ P+LT   +   I G  +   +   + 
Sbjct: 118 IQRNAEQIDALHTMQIDPIGFLVSPRLWAAIIAFPILTTFFDLIGIYGGYLTGVELLGVD 177

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK-----VTT 348
              +++R     +  NI+ GLIKA        ++   +G+   + ++  G +      T 
Sbjct: 178 PGAYWNRIFEAVSPQNIYNGLIKALAFGIITTLICAFQGYFTHIKADIPGARGVSQTTTR 237

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV S   +++ D L   F  A
Sbjct: 238 AVVYSSIAILMFDYLITSFQMA 259


>gi|28899437|ref|NP_799042.1| ABC transporter [Vibrio parahaemolyticus RIMD 2210633]
 gi|153839285|ref|ZP_01991952.1| toluene tolerance protein Ttg2B [Vibrio parahaemolyticus AQ3810]
 gi|260363394|ref|ZP_05776246.1| organic solvent ABC transporter, permease protein [Vibrio
           parahaemolyticus K5030]
 gi|260879329|ref|ZP_05891684.1| organic solvent ABC transporter, permease protein [Vibrio
           parahaemolyticus AN-5034]
 gi|260895712|ref|ZP_05904208.1| organic solvent ABC transporter, permease protein [Vibrio
           parahaemolyticus Peru-466]
 gi|260900285|ref|ZP_05908680.1| organic solvent ABC transporter, permease protein [Vibrio
           parahaemolyticus AQ4037]
 gi|28807673|dbj|BAC60926.1| putative ABC superfamily transport protein [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|149747186|gb|EDM58174.1| toluene tolerance protein Ttg2B [Vibrio parahaemolyticus AQ3810]
 gi|308087410|gb|EFO37105.1| organic solvent ABC transporter, permease protein [Vibrio
           parahaemolyticus Peru-466]
 gi|308093131|gb|EFO42826.1| organic solvent ABC transporter, permease protein [Vibrio
           parahaemolyticus AN-5034]
 gi|308107579|gb|EFO45119.1| organic solvent ABC transporter, permease protein [Vibrio
           parahaemolyticus AQ4037]
 gi|308111178|gb|EFO48718.1| organic solvent ABC transporter, permease protein [Vibrio
           parahaemolyticus K5030]
 gi|328471426|gb|EGF42321.1| ABC transporter [Vibrio parahaemolyticus 10329]
          Length = 263

 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 117/216 (54%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q+Y VGV  + ++++     G V++ QG   L  +GAE     ++++  LRE+G ++
Sbjct: 47  LIKQLYSVGVQSLAIIVVSGLFIGMVLSLQGYVVLVDYGAEGSLGQMVALSLLRELGPVV 106

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D ++ +I+PR WA  IS+PLL ++  
Sbjct: 107 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGAISMPLLAMIFM 166

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I GA +V   +  +    F++   S+  L  +I   +IK    A  +  +A+  G+ 
Sbjct: 167 AVGIWGAQLVGVDWKGVDHGSFWAAMQSSVELGQDIGNSMIKCFVFAITVTWIALFNGYD 226

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV S   V+ +D +     F 
Sbjct: 227 AIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 262


>gi|238918531|ref|YP_002932045.1| hypothetical protein NT01EI_0581 [Edwardsiella ictaluri 93-146]
 gi|238868099|gb|ACR67810.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 235

 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 118/219 (53%), Gaps = 7/219 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           L RQ+Y VGV  + ++I+     G V+  QG   L+ + AE  S+ +M  L L RE+G +
Sbjct: 19  LRRQLYSVGVQSLLIIIVSGLFIGMVLGLQGYLVLTTYSAEA-SLGMMVALSLLRELGPV 77

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +++PR WA +IS+PLLT++ 
Sbjct: 78  VTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLTVIF 137

Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331
               I G S+  V WK  D  F  F+S          ++   LIK+   A  +  +A+  
Sbjct: 138 VAVGIWGGSVVGVDWKGIDAGF--FWSAMQGAVDYRTDLLNCLIKSLIFAITVMWIALFN 195

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G+     S  + +  T  VV +   V+ +D +     F 
Sbjct: 196 GYDAVPTSAGISRATTRTVVHASLAVLGLDFVLTALMFG 234


>gi|311746375|ref|ZP_07720160.1| putative ABC transporter, permease protein [Algoriphagus sp. PR1]
 gi|126575261|gb|EAZ79593.1| putative ABC transporter, permease protein [Algoriphagus sp. PR1]
          Length = 263

 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 114/211 (54%)

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           L  +  Q Y +GV  +P++ L  F+ G V   Q    LS+FGA  +   L+SI  +R +G
Sbjct: 42  LKEVFHQCYRIGVESLPLISLTGFIVGIVFTNQSRPSLSEFGATSWLPSLISIAVVRAMG 101

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            L+TA++ AG+ GS+I AEIGSMK+ E+IDA+     +  + L+  R+ A    +P+L +
Sbjct: 102 PLVTALIAAGKMGSSIGAEIGSMKVTEQIDAMEVSATNPFKFLVVTRVLATTFMIPILVM 161

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
             +F A++G+ + +     +    FF +   + +  +I + ++K+      IGIV   +G
Sbjct: 162 YTDFVALMGSFLSVNANEMVSMTTFFVQVFESISFLDITSSVLKSLLFGFTIGIVGCYKG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
           +     +  +G+   + VV ++ ++ I + L
Sbjct: 222 YNSSKGTEGVGRAANSAVVMAMFLIFIEELL 252


>gi|312887098|ref|ZP_07746702.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM
           18603]
 gi|311300410|gb|EFQ77475.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM
           18603]
          Length = 256

 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 126/244 (51%), Gaps = 7/244 (2%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
            F++++ S A         TG F +   + +  +  L+ Q Y +G    P++ L  F+ G
Sbjct: 9   SFLDETGSMAKF-------TGHFFSHGLRPRFEVKELLGQCYTIGYKSFPLIGLTGFIMG 61

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+  Q    L  +G +     ++ I  +REIG ++TA++ AG+ GS+I AE+GSMK+ E
Sbjct: 62  LVLTMQLRPSLVSYGVQSELPVMVGIAIVREIGPVITALIFAGKIGSSIGAELGSMKVTE 121

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +IDA+   G +  + L++ R+ A  + LP+LT+L +  ++ GA I +          FF+
Sbjct: 122 QIDAMEVSGTNPYKYLVATRVLATTLMLPILTVLGDAISLFGAYIGVNLSSVTSLHFFFT 181

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           +   + + ++I   + K  F   A+GI+   +GF     +  +G    + VV S  ++ I
Sbjct: 182 QVFQSLSFSDILPAITKTFFFGFAVGIIGCYKGFNSSKGTQGVGVSANSAVVLSSVLIFI 241

Query: 360 IDSL 363
           ID L
Sbjct: 242 IDLL 245


>gi|329297311|ref|ZP_08254647.1| hypothetical protein Pstas_13477 [Plautia stali symbiont]
          Length = 260

 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 117/217 (53%), Gaps = 5/217 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y VGV  + ++++     G V+  QG   L+ + AE     L+++  LRE+G ++
Sbjct: 44  LVKQLYSVGVLSLLIIVVSGLFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R ++SPR WA  IS+PLL ++  
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVVSPRFWAGFISMPLLALIFT 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
              I G ++  V WK  D  F  F+S   +      ++   LIK+   A  +  +A+  G
Sbjct: 164 AVGIAGGALVGVAWKGIDPGF--FWSTMQNAVDFRTDVINCLIKSAVFAITVTWIALFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           +     S  + +  T  VV +   V+ +D +     F
Sbjct: 222 YDAIPTSEGISRATTRTVVHASLAVLGLDFVLTALMF 258


>gi|300724964|ref|YP_003714289.1| putative ABC transporter membrane protein [Xenorhabdus nematophila
           ATCC 19061]
 gi|297631506|emb|CBJ92213.1| putative transport protein (ABC superfamily, membrane) [Xenorhabdus
           nematophila ATCC 19061]
          Length = 262

 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 120/221 (54%), Gaps = 7/221 (3%)

Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIG 212
           L L +Q+Y VGV  + ++++     G V+A QG   L+ F AE  S+ +M  L L RE+G
Sbjct: 44  LLLRQQLYSVGVQSLLIIVVSGLFIGMVLALQGYLVLTTFSAE-GSLGMMVALSLLRELG 102

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            ++TA++ AGR+GSA+ AEIG MK  E+I ++  M +D +R +++PR WA  IS+PLLT+
Sbjct: 103 PVVTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLRRVVAPRFWAGFISMPLLTL 162

Query: 273 LANFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAM 329
           +     I+G +I  V WK  D  F  F+S   S      ++    +K+   A  +  +A+
Sbjct: 163 IFVAVGILGGAIVGVDWKGIDAGF--FWSSMQSAVEWKKDLLNCFLKSVVFAITVTWIAL 220

Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             G+     S  + +  T  VV +   V+ +D +     F 
Sbjct: 221 FNGYDAIPTSEGISRATTRTVVHASLAVLGLDFVLTALMFG 261


>gi|218550477|ref|YP_002384268.1| toluene ABC transporter membrane protein [Escherichia fergusonii
           ATCC 35469]
 gi|218358018|emb|CAQ90664.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia fergusonii ATCC 35469]
 gi|324115202|gb|EGC09166.1| inner membrane protein yrbE [Escherichia fergusonii B253]
 gi|325498775|gb|EGC96634.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia fergusonii ECD227]
          Length = 260

 Score =  103 bits (257), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 118/218 (54%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LIRQ+Y VGV  + ++I+     G V+  QG   L+ + AE     L+++  LRE+G ++
Sbjct: 44  LIRQIYNVGVLSMLIIIVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ AGR+GSA+ AEIG M+  E++ ++  M +D +R +ISPR WA +ISLPLLTI+  
Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFV 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEG 332
              I G S+  V WK  D  F  F+S   +      ++   LIK+   A  +  +A+  G
Sbjct: 164 AVGIWGGSLVGVSWKGIDAGF--FWSAMQNAVDWRLDLVNCLIKSVVFAITVTWIALFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV +   V+ +D +     F 
Sbjct: 222 YDAIPTSAGISRATTRTVVHASLAVLGLDFVLTALMFG 259


>gi|320640265|gb|EFX09837.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli O157:H7 str. G5101]
          Length = 260

 Score =  103 bits (257), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 118/218 (54%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y VGV  + ++++     G V+  QG   L+ + AE     L+++  LRE+G ++
Sbjct: 44  LVRQLYNVGVLSMLIIVVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ AGR+GSA+ AEIG M+  E++ ++  M +D +R +ISPR WA +ISLPLLT++  
Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFA 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
              I G S+  V WK  D  F  F+S   +      ++   LIK+   A  +  +++  G
Sbjct: 164 AVGIWGGSLVGVSWKGIDSGF--FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV S   V+ +D +     F 
Sbjct: 222 YDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|325109134|ref|YP_004270202.1| hypothetical protein Plabr_2580 [Planctomyces brasiliensis DSM
           5305]
 gi|324969402|gb|ADY60180.1| protein of unknown function DUF140 [Planctomyces brasiliensis DSM
           5305]
          Length = 271

 Score =  103 bits (257), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 113/208 (54%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L   +Y +GV  +PVV++     G V+A Q   QL     E     ++++  ++E+G +L
Sbjct: 50  LWPNLYQIGVLSLPVVMVTGGFIGMVLAIQTYDQLRLMHMESHLGSVINLALVKELGPVL 109

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A M+AGR GSAI AE+G+M++ E+IDA+  +G D V+ L+ PR    ++ +PLLTI+A+
Sbjct: 110 AATMLAGRVGSAIAAELGTMRVTEQIDALEALGADPVQYLVVPRFLGCVLLIPLLTIVAD 169

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              ++   +       I    ++   ++  TL ++++G++K+ F   AI +V+   GF  
Sbjct: 170 TVGMLCGWLFSTSVLGINSYFYWHHTYAYITLFDVYSGIMKSVFFGAAIALVSCHRGFQA 229

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              +  +G   T   V S   ++ +D L
Sbjct: 230 KAGAEGVGTAATQTFVYSFVCILFLDFL 257


>gi|294793372|ref|ZP_06758517.1| putative membrane protein [Veillonella sp. 6_1_27]
 gi|294795191|ref|ZP_06760325.1| putative membrane protein [Veillonella sp. 3_1_44]
 gi|294453983|gb|EFG22358.1| putative membrane protein [Veillonella sp. 3_1_44]
 gi|294455803|gb|EFG24168.1| putative membrane protein [Veillonella sp. 6_1_27]
          Length = 254

 Score =  103 bits (257), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 112/212 (52%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +QM ++GV  +P++ L     GAV+  Q    L  +GA+     LM++   RE+G +L  
Sbjct: 43  QQMAHLGVDSLPIISLTLLFAGAVMTLQITDVLITYGAQSTVGGLMAVAMGRELGPILVG 102

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           V++AGR G+AI AEIG+MK+ E+IDA+R M +D V  L+ PR+ A +I +P+L       
Sbjct: 103 VVLAGRVGAAITAEIGTMKVTEQIDALRVMAVDPVGYLVVPRVVACMIMVPILAFYGVVI 162

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            I G   V      +  + +       +T+++   GLIK+      I +V   +G    +
Sbjct: 163 GIAGGYFVATVIKGLAPSTYLDSIQMFSTISDFTLGLIKSSVFGAVIALVGAYKGMETKM 222

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
            + ++G   T+ VV SI +V +++   +   F
Sbjct: 223 GAEAVGFSTTSSVVTSIILVFVLNYFLSTLLF 254


>gi|261415260|ref|YP_003248943.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261371716|gb|ACX74461.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302327576|gb|ADL26777.1| putative membrane protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 261

 Score =  103 bits (257), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 116/207 (56%)

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           L + + QM++VG++ +PVV   S  TGA+++ Q A+Q       +F    +    + E+ 
Sbjct: 44  LHTTVEQMHHVGITSIPVVFAASLATGAIMSWQLAYQFGDMIPMMFVGMAVGKSVMVELC 103

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            +LTA+++AGR G+++ +E+G+M + E++DA + +GL+  + L++PR+ A +I LP+LTI
Sbjct: 104 PILTAMVLAGRIGASMCSELGTMAVTEQLDAYKVLGLNPYKYLLAPRLIATVIMLPVLTI 163

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           L+ F  I+G   V   Y ++ ++VFF          ++  GLIKA      I   A   G
Sbjct: 164 LSIFIGIVGGYEVAHLYKEVSWSVFFYGVRMFYQNWDLVVGLIKATLYGFFISSYACFFG 223

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVII 359
           F     +  +GK     VV  ++ ++I
Sbjct: 224 FFTHSGAEGVGKSTKATVVAGMTSILI 250


>gi|313894582|ref|ZP_07828145.1| conserved hypothetical protein [Veillonella sp. oral taxon 158 str.
           F0412]
 gi|313440772|gb|EFR59201.1| conserved hypothetical protein [Veillonella sp. oral taxon 158 str.
           F0412]
          Length = 256

 Score =  103 bits (257), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 112/212 (52%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +QM ++GV  +P++ L     GAV+  Q    L  +GA+     LM++   RE+G +L  
Sbjct: 45  QQMAHLGVDSLPIISLTLLFAGAVMTLQITDVLITYGAQSTVGGLMAVAMGRELGPILVG 104

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           V++AGR G+AI AEIG+MK+ E+IDA+R M +D V  L+ PR+ A ++ +P+L       
Sbjct: 105 VVLAGRVGAAITAEIGTMKVTEQIDALRVMAVDPVGYLVVPRVVACMVMVPILAFYGVVI 164

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            I G   V      +  + +       +T+++   GLIK+      I +V   +G    +
Sbjct: 165 GIAGGYFVATAIKGLAPSTYLDSIQMFSTISDFTLGLIKSSVFGAVIALVGAYKGMETKM 224

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
            + ++G   T+ VV SI +V +++   +   +
Sbjct: 225 GAEAVGFSTTSSVVTSIILVFVLNYFLSTLLY 256


>gi|221134714|ref|ZP_03561017.1| hypothetical protein GHTCC_07282 [Glaciecola sp. HTCC2999]
          Length = 258

 Score =  103 bits (257), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 129/234 (55%), Gaps = 3/234 (1%)

Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198
           TG   A   + K   L+L +Q+Y VGV  + ++++     G V+A QG   L  +GAE  
Sbjct: 26  TGALIAVP-QLKNIRLTL-QQIYVVGVQSLLIILVSGLFIGMVMALQGYTILVGYGAEGS 83

Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258
              ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +++P
Sbjct: 84  LGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVVAP 143

Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKA 317
           R+WA IIS+P+L I+ +   I+G  +V   +  +    ++S   +T     ++  G+IK+
Sbjct: 144 RVWAGIISMPMLAIIFSAIGILGGHLVGVDWLGVDSGSYWSIMQATVDWNKDVVNGIIKS 203

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
              A  +  +A+ +G+     S  + +  T  VV S   V+ +D +     F I
Sbjct: 204 IVFAIVVTWIAIFKGYDAVPTSEGISQATTQTVVYSSLAVLGLDFVLTALMFGI 257


>gi|317494033|ref|ZP_07952449.1| hypothetical protein HMPREF0864_03218 [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316917806|gb|EFV39149.1| hypothetical protein HMPREF0864_03218 [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 260

 Score =  103 bits (257), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 118/219 (53%), Gaps = 7/219 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           L +Q+Y VGV  + ++I+     G V+  QG   L+ + AE  S+ +M  L L RE+G +
Sbjct: 44  LRKQLYSVGVQSLLIIIVSGLFIGMVLGLQGYLILTTYSAEA-SLGMMVALSLLRELGPV 102

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGR+GSA+ AEIG MK  E+I ++  M +D +R +++PR WA IIS+PLLT + 
Sbjct: 103 VTALLFAGRAGSAVTAEIGLMKATEQISSMEMMAVDPLRRIVAPRFWAGIISMPLLTAIF 162

Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331
               I G S+  V WK  D  F  F+S    +     ++   +IK+   A  I  +A+  
Sbjct: 163 VAVGIWGGSVVGVDWKGIDSGF--FWSAMQGSVDFHTDLVNCMIKSVVFAITIMWIALFN 220

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 221 GYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|298369697|ref|ZP_06981014.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282254|gb|EFI23742.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314]
          Length = 258

 Score =  103 bits (257), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 120/215 (55%), Gaps = 3/215 (1%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215
           IRQ+Y+ GV  V ++ +     G V+  QG  QL++F  A+I    + + L LRE+G +L
Sbjct: 43  IRQVYFSGVMSVLIIAVSGLFVGMVLGLQGYTQLAKFKSADILGYMVAASL-LRELGPVL 101

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ A  +G A+ +EIG MK  E+++A+  M +D V  +++PR WA + S+PLL  + N
Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVDPVARVVAPRFWAGVFSMPLLASIFN 161

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
            + I GA +V  ++  +   +F+++  +  +   ++  GLIK+     A+ ++A+ +GF 
Sbjct: 162 VAGIYGAYLVGVQWLGLDGGIFWAQMQNNISFGYDVANGLIKSAAFGTAVTLIAVHQGFH 221

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               S  + +  T  VV S   ++ +D +   + F
Sbjct: 222 CVPTSEGILRASTRTVVSSALTILAVDFVLTAWMF 256


>gi|161506125|ref|YP_001573237.1| hypothetical protein SARI_04313 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160867472|gb|ABX24095.1| hypothetical protein SARI_04313 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 260

 Score =  103 bits (257), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 118/218 (54%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y VGV  + ++++     G V+  QG   L+ + AE     L+++  LRE+G ++
Sbjct: 44  LVRQLYNVGVLSMLIIVVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ AGR+GSA+ AEIG M+  E++ ++  M +D +R +ISPR WA +ISLPLLTI+  
Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFV 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
              I G S+  V WK  D  F  F+S   +      ++   LIK+   A  +  +A+  G
Sbjct: 164 AVGIWGGSLVGVSWKGIDAGF--FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWIALFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV +   V+ +D +     F 
Sbjct: 222 YDAIPTSAGISRATTRTVVHASLAVLGLDFVLTALMFG 259


>gi|34495903|ref|NP_900118.1| ABC transporter permease [Chromobacterium violaceum ATCC 12472]
 gi|34101758|gb|AAQ58126.1| probable ABC transport system permease protein [Chromobacterium
           violaceum ATCC 12472]
          Length = 257

 Score =  103 bits (257), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 117/214 (54%), Gaps = 1/214 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           IR++Y+ GV  + ++++     G V+  QG   L++FG+      ++++  LRE+G +L 
Sbjct: 44  IREIYFAGVMSLIIIVVSGLFVGMVLGLQGYTTLAKFGSADALGAMVALALLRELGPVLA 103

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ A R+GSA+ AEIG MK  E++DA+  M ++ +  +I+PR WA ++S+P+L  L N 
Sbjct: 104 ALLFASRAGSAMTAEIGLMKTTEQLDAMSVMAVNPMARVIAPRFWAGVVSMPILAALFNV 163

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAV 335
             I G  +V      +    F+S+      L  ++  G+IK+     A+ ++A+ EG+  
Sbjct: 164 VGIFGGYLVGVVMIGLDAGTFWSQMQGNVDLHYDVVNGIIKSLVFGIAVTLIAVFEGYDA 223

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              +  +    T  VV S  +++ +D +   F F
Sbjct: 224 TPTAAGVSAATTRTVVTSALVILALDFVLTAFMF 257


>gi|49082890|gb|AAT50845.1| PA4455 [synthetic construct]
          Length = 266

 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 121/216 (56%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y VGV  + ++++     G V+A QG   L  +G+E     ++++  LRE+G ++
Sbjct: 48  LVKQLYSVGVLSLAIIVVSGLFIGMVLALQGYNILISYGSEQAVGQMVALTLLRELGPVV 107

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           T ++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  IS+PLL  + +
Sbjct: 108 TGLLFAGRAGSALTAEIGNMKATEQLSSLEMIGVDPLKYIVAPRLWAGFISMPLLAAIFS 167

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G ++V   +  +    F++   ++     ++  G+IK+   A  +  +A+ +G+ 
Sbjct: 168 VVGIWGGAMVAVDWLGVYEGSFWANMQNSVQFTEDVLNGVIKSIVFAFVVTWIAVYQGYD 227

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV +   V+ +D +     F 
Sbjct: 228 CEPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 263


>gi|16127925|ref|NP_422489.1| ABC transporter permease [Caulobacter crescentus CB15]
 gi|221236745|ref|YP_002519182.1| organic solvent resistance transport system permease [Caulobacter
           crescentus NA1000]
 gi|13425459|gb|AAK25657.1| ABC transporter, permease protein, putative [Caulobacter crescentus
           CB15]
 gi|220965918|gb|ACL97274.1| organic solvent resistance transport system permease [Caulobacter
           crescentus NA1000]
          Length = 269

 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 113/217 (52%)

Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211
           FL  L RQ+  +G   +PVV L +  TGA +A        +F AE     ++++   RE+
Sbjct: 49  FLSQLRRQIVAIGFFSLPVVGLTAVFTGAALALNIFTGGGRFNAEQVMPQIVALGITREL 108

Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271
           G +L A+M+AGR  +AI AEIG+M+  E+IDA+RT+  D  R L++PR+ A +++LPLLT
Sbjct: 109 GPVLAALMLAGRVSAAIAAEIGAMRATEQIDAMRTLSTDPFRYLVAPRLLAAVLTLPLLT 168

Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
            +A+   I G  +V  +  +    V+           +I +GLIKA      + ++    
Sbjct: 169 AVADIIGIAGGWLVATRVLEFNPTVYIRNTIDFLESWDIISGLIKAAVFGFIVALMGCYH 228

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           G+     +  +G+  T  VV S  ++   D L    +
Sbjct: 229 GYNASGGARGVGRATTHAVVSSAILIFATDYLLTTLF 265


>gi|332140253|ref|YP_004425991.1| putative transport protein (ABC superfamily, membrane) [Alteromonas
           macleodii str. 'Deep ecotype']
 gi|327550275|gb|AEA96993.1| putative transport protein (ABC superfamily, membrane) [Alteromonas
           macleodii str. 'Deep ecotype']
          Length = 258

 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 121/216 (56%), Gaps = 1/216 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I+Q+Y VGV  + ++++     G V+A QG   L  +GAE     ++++  LRE+G ++T
Sbjct: 42  IKQLYVVGVQSLLIIMVSGLFIGMVMALQGYTILVDYGAEGSLGPMVALSLLRELGPVVT 101

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +++PR WA ++++P+L I+ + 
Sbjct: 102 ALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRIVAPRFWAGMLAMPMLAIIFSA 161

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             I+G  +V   +  +    ++S   ST     ++  G+IK+   A  +  +A+ +G+  
Sbjct: 162 IGILGGHLVGVDWLGVDAGSYWSIMQSTVDWNQDVINGVIKSLVFALVVTWIAIFKGYDS 221

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
              S  + K  T  VV S   V+ +D +     F I
Sbjct: 222 IPTSEGISKATTETVVYSSLAVLGLDFVLTALMFGI 257


>gi|307544520|ref|YP_003896999.1| ABC transporter permease [Halomonas elongata DSM 2581]
 gi|307216544|emb|CBV41814.1| probable ABC-type transport system permease protein [Halomonas
           elongata DSM 2581]
          Length = 260

 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 135/252 (53%), Gaps = 12/252 (4%)

Query: 116 KKIVKFINDSCSQAHILG-----LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170
           ++I +     C+    LG     LV S  G+  A   +        +RQM++VGV  + +
Sbjct: 3   ERIARLGRWGCNTLESLGDAGIFLVQSMFGKPSAEGMRL------WLRQMHFVGVMSLAI 56

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           V++     G V+A QG   L  FGAE     ++++  LRE+  ++ A++ AGR+GSA+ A
Sbjct: 57  VLVSGLFIGMVLALQGYTILVDFGAEDALGQMVALSLLRELAPVVAALLFAGRAGSALTA 116

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           EIG MK  E++ ++  +G+D +R +++PR+WA  ++LPLLTI      + G  +V  ++ 
Sbjct: 117 EIGLMKATEQLTSMEMIGVDPLRRVVAPRLWAGFVALPLLTIGFGVVGVWGGQLVGVQWL 176

Query: 291 DIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            +    ++    ++   +A++  GLIK+   A  +  +A+ +G+A+   S  + +  T  
Sbjct: 177 GVFEGSYWGNMQASVDFIADVGNGLIKSLVFALVVTWIAVYQGYALVPTSEGISRATTRT 236

Query: 350 VVQSISIVIIID 361
           VV +   V+ +D
Sbjct: 237 VVYASLAVLGLD 248


>gi|82778508|ref|YP_404857.1| hypothetical protein SDY_3375 [Shigella dysenteriae Sd197]
 gi|170765889|ref|ZP_02900700.1| toluene ABC transporter, permease protein [Escherichia albertii
           TW07627]
 gi|81242656|gb|ABB63366.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
 gi|170125035|gb|EDS93966.1| toluene ABC transporter, permease protein [Escherichia albertii
           TW07627]
          Length = 260

 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 118/218 (54%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y VGV  + ++++     G V+  QG   L+ + AE     L+++  LRE+G ++
Sbjct: 44  LVRQLYNVGVLSMLIIVVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ AGR+GSA+ AEIG M+  E++ ++  M +D +R +ISPR WA +ISLPLLTI+  
Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFV 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
              I G S+  V WK  D  F  F+S   +      ++   LIK+   A  +  +++  G
Sbjct: 164 AVGIWGGSLVGVSWKGIDSGF--FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV S   V+ +D +     F 
Sbjct: 222 YDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|198242766|ref|YP_002217283.1| toluene ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|197937282|gb|ACH74615.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
          Length = 260

 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 118/218 (54%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y VGV  + ++I+     G V+  QG   L+ + AE     L+++  LRE+G ++
Sbjct: 44  LVRQLYNVGVLSMLIIIVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ AGR+GSA+ AEIG M+  E++ ++  M +D +R +ISPR WA +ISLPLLTI+  
Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFV 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
              I G S+  V WK  D  F  F+S   +      ++   LIK+   A  +  +A+  G
Sbjct: 164 AVGIWGGSLVGVSWKGIDAGF--FWSVMQNAVDWRMDLVNCLIKSVVFAITVTWIALFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV +   V+ +D +     F 
Sbjct: 222 YDAIPTSAGISRATTRTVVHASLAVLGLDFVLTALMFG 259


>gi|330501880|ref|YP_004378749.1| hypothetical protein MDS_0966 [Pseudomonas mendocina NK-01]
 gi|328916166|gb|AEB56997.1| hypothetical protein MDS_0966 [Pseudomonas mendocina NK-01]
          Length = 265

 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 124/216 (57%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q++ VGV  + ++++     G V+A QG   L  +G+E     ++++  LRE+G ++
Sbjct: 48  LIKQLFAVGVMSLAIIVVSGIFIGMVLALQGYNILVSYGSEQAVGQMVALTLLRELGPVV 107

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  IS+PLL ++ +
Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPLLAMIFS 167

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G ++V   +  +    F++   ++ +   ++  G+IK+   A  +  +A+ +G+ 
Sbjct: 168 VVGIWGGAMVAVDWLGVYEGSFWANMQNSVSFYDDVLNGVIKSIVFAFVVTWIAVFQGYD 227

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV +   V+ +D +     F 
Sbjct: 228 CEPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 263


>gi|167645294|ref|YP_001682957.1| hypothetical protein Caul_1329 [Caulobacter sp. K31]
 gi|167347724|gb|ABZ70459.1| protein of unknown function DUF140 [Caulobacter sp. K31]
          Length = 270

 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 112/217 (51%)

Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211
           FL  L RQ   +G   +PVV L +  TGA +A        +F AE     ++++   RE+
Sbjct: 49  FLGQLWRQFVAIGFFSLPVVGLTAVFTGAALALNIFTGGGRFNAEQVMPQIVALGITREL 108

Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271
           G +L A+M+AGR  +AI AEIG+M+  E+IDA+RT+  D  R L+ PR+ A ++ LP+LT
Sbjct: 109 GPVLAALMLAGRVSAAIAAEIGAMRATEQIDAMRTLSTDPFRYLVGPRLLAGVLMLPILT 168

Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
            +A+   + G  +V  +  D   AV+           ++ +GLIKA      + ++    
Sbjct: 169 AVADTIGVAGGWLVATRVLDFSSAVYIRNTLDFLQGWDVISGLIKAAVFGFIVALMGCYH 228

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           G+     +  +G+  T  VV S  ++   D L   F+
Sbjct: 229 GYNAKGGARGVGRATTHAVVSSAILIFASDYLLTTFF 265


>gi|15599651|ref|NP_253145.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|107099960|ref|ZP_01363878.1| hypothetical protein PaerPA_01000981 [Pseudomonas aeruginosa PACS2]
 gi|116052487|ref|YP_792800.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218893546|ref|YP_002442415.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254238883|ref|ZP_04932206.1| hypothetical protein PACG_05051 [Pseudomonas aeruginosa C3719]
 gi|254244732|ref|ZP_04938054.1| hypothetical protein PA2G_05604 [Pseudomonas aeruginosa 2192]
 gi|296391165|ref|ZP_06880640.1| putative ABC transport system permease protein [Pseudomonas
           aeruginosa PAb1]
 gi|313107040|ref|ZP_07793243.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016]
 gi|9950690|gb|AAG07843.1|AE004859_12 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|115587708|gb|ABJ13723.1| putative toluene tolerance ABC efflux transporter [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|126170814|gb|EAZ56325.1| hypothetical protein PACG_05051 [Pseudomonas aeruginosa C3719]
 gi|126198110|gb|EAZ62173.1| hypothetical protein PA2G_05604 [Pseudomonas aeruginosa 2192]
 gi|218773774|emb|CAW29588.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|310879745|gb|EFQ38339.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016]
          Length = 265

 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 121/216 (56%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y VGV  + ++++     G V+A QG   L  +G+E     ++++  LRE+G ++
Sbjct: 48  LVKQLYSVGVLSLAIIVVSGLFIGMVLALQGYNILISYGSEQAVGQMVALTLLRELGPVV 107

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           T ++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  IS+PLL  + +
Sbjct: 108 TGLLFAGRAGSALTAEIGNMKATEQLSSLEMIGVDPLKYIVAPRLWAGFISMPLLAAIFS 167

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G ++V   +  +    F++   ++     ++  G+IK+   A  +  +A+ +G+ 
Sbjct: 168 VVGIWGGAMVAVDWLGVYEGSFWANMQNSVQFTEDVLNGVIKSIVFAFVVTWIAVYQGYD 227

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV +   V+ +D +     F 
Sbjct: 228 CEPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 263


>gi|269137863|ref|YP_003294563.1| putative transport protein [Edwardsiella tarda EIB202]
 gi|267983523|gb|ACY83352.1| putative transport protein [Edwardsiella tarda EIB202]
 gi|304557916|gb|ADM40580.1| hypothetical protein ETAF_0456 [Edwardsiella tarda FL6-60]
          Length = 260

 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 118/219 (53%), Gaps = 7/219 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           L RQ+Y VGV  + ++I+     G V+  QG   L+ + AE  S+ +M  L L RE+G +
Sbjct: 44  LRRQLYSVGVQSLLIIIVSGLFIGMVLGLQGYLVLTTYSAEA-SLGMMVALSLLRELGPV 102

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +++PR WA +IS+PLLT++ 
Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLTVIF 162

Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331
               I G S+  V WK  D  F  F+S          ++   LIK+   A  +  +A+  
Sbjct: 163 VAVGIWGGSVVGVDWKGIDAGF--FWSAMQGAVDYRTDLLNCLIKSLVFAITVMWIALFN 220

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G+     S  + +  T  VV +   V+ +D +     F 
Sbjct: 221 GYDAVPTSAGISRATTRTVVHASLAVLGLDFVLTALMFG 259


>gi|157372592|ref|YP_001480581.1| hypothetical protein Spro_4359 [Serratia proteamaculans 568]
 gi|157324356|gb|ABV43453.1| protein of unknown function DUF140 [Serratia proteamaculans 568]
          Length = 260

 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 119/219 (54%), Gaps = 7/219 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           L++QM+ VGV  + ++++     G V+  QG   L+ + AE  S+ +M  L L RE+G +
Sbjct: 44  LLKQMHSVGVQSLLIIMVSGLFIGMVLGLQGYLVLTTYSAEA-SLGMMVALSLLRELGPV 102

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGR+GSA+ AEIG MK  E+I ++  M +D +R +++PR WA +IS+PLLT++ 
Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLRRIVAPRFWAGLISMPLLTLIF 162

Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331
               I G SI  V WK  D  F  F+S          ++   L+K+   A  +  +A+  
Sbjct: 163 VAIGIWGGSIVGVDWKGIDGGF--FWSAMQGAVEWKKDLLNCLLKSVVFAITVTWIAIFN 220

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 221 GYDAVPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|332178184|gb|AEE13873.1| protein of unknown function DUF140 [Thermodesulfobium narugense DSM
           14796]
          Length = 250

 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 120/223 (53%), Gaps = 2/223 (0%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           +F+ FL   + Q + +GV  VP+V + S   G V A Q A +   +GA      ++ I  
Sbjct: 29  RFRFFLF--LDQCFMIGVESVPIVFITSLFVGMVFAIQTAREFVFYGAGSVVGGVVGIAI 86

Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267
           +RE+G ++T V++AGR GSA+ AEIG+MK+ E+IDA+ +M +D +  L++PR++A ++ L
Sbjct: 87  IRELGPMITGVVVAGRVGSAMAAEIGTMKVTEQIDALLSMSVDPIFYLVAPRVFACMLML 146

Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327
           PLLT++AN + +IG   V   Y  +  + F         + +I   LIKA      I ++
Sbjct: 147 PLLTVIANLAGVIGGYFVAVYYGGVIPSSFVESVRFLVKVWDIEASLIKAMIFGSIISLI 206

Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               G      +  +G      VV S+ ++ I +   ++  F+
Sbjct: 207 GTFIGLRTKAGARGVGNSTMLSVVISLILIFIFNYFLSMVMFS 249


>gi|294084216|ref|YP_003550974.1| organic solvents resistance ABC transporter [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292663789|gb|ADE38890.1| ABC-type transport system involved in resistance to organic
           solvents [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 258

 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 117/218 (53%), Gaps = 4/218 (1%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L RQ   +G   +PVV L +  +G V+A Q     ++F AE     ++ +   RE+G +L
Sbjct: 43  LWRQTLDIGYYSLPVVGLTTLFSGMVLALQSYTGFARFSAEDTVATVVVLSVTRELGPVL 102

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
             +M+AGR G+++ AEIG+M++ ++IDA+ T+    ++ L++PRI A  + LP L ++ +
Sbjct: 103 AGLMVAGRIGASMAAEIGTMRVTDQIDALDTLSTRPMQYLVAPRIMAGTLCLPFLVLIGD 162

Query: 276 FSAIIGASIVIWKYYDIPF--AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
              + G  IV    Y + F  +++ SR      +++I  GL+KA      I ++    G+
Sbjct: 163 IIGVFGGYIV--GVYRLGFNPSIYLSRTLEYLEVSDITLGLVKAAVFGFLIALMGCYHGY 220

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
             G  +  +G+  T  VV S  +++I + L    YF +
Sbjct: 221 HSGRGAEGVGRATTNAVVSSSILILIANYLVTALYFGV 258


>gi|116331506|ref|YP_801224.1| membrane protein of an ABC transporter complex [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
 gi|116125195|gb|ABJ76466.1| Membrane protein of an ABC transporter complex [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
          Length = 259

 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 108/207 (52%), Gaps = 4/207 (1%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           ++ QMY  GV  + VV +++  TG +++      L  FGAE     LM+I   RE+   +
Sbjct: 40  ILDQMYITGVGSISVVSIVAIFTGMIMSLNTGLGLKDFGAEGQIGLLMTITLTREMSPFM 99

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA+++A   GSA+ AEIG+MKI+EEIDA+  M +D VR LI PRI    I +P+L + + 
Sbjct: 100 TALILAASIGSAMAAEIGTMKISEEIDALEVMSIDPVRYLIFPRILGFSIMVPVLCVYST 159

Query: 276 FSAIIGASIVIWKYYDIPFAVF----FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
              I+G +IV +    I +  +    F R  S   L +++ G++K       +  ++   
Sbjct: 160 ILGILGGAIVGYFQLGIDYFTYFRDVFDRVASIPGLKDLYVGILKGFIFGVIVSAISCSH 219

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVI 358
           G      +  +G+     VV S  +VI
Sbjct: 220 GLRTSGGAIGVGRATRESVVTSFLMVI 246


>gi|148263953|ref|YP_001230659.1| hypothetical protein Gura_1896 [Geobacter uraniireducens Rf4]
 gi|146397453|gb|ABQ26086.1| protein of unknown function DUF140 [Geobacter uraniireducens Rf4]
          Length = 258

 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 117/210 (55%), Gaps = 1/210 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           ++Q+Y+ G+  + V+++IS   G VI  Q    L   G EI +  ++  + +RE+G LLT
Sbjct: 46  MKQVYFTGLEALKVIVVISLTIGVVIITQ-IISLVGAGNEILTGKVLIWVVIRELGPLLT 104

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A+++  RSG+AI  E+G MKIN EI++I ++G+   + LI PRI+ +  ++ +LTI    
Sbjct: 105 AIVVIARSGTAIATELGYMKINNEIESIESLGIPAGQYLIMPRIFGVTTAVMILTIYFEI 164

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           ++I G  IV    + +PF  F     ++ TL  +   + K+ F    +     K+G  VG
Sbjct: 165 ASIFGGFIVASIGWHVPFDRFSEGVFTSLTLKELGRSVAKSFFFGLFLSAACCKQGLGVG 224

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
             +  + +  T  V+QS+ +V ++D +  +
Sbjct: 225 KSATQIPQAATKGVMQSLFLVFLLDGIITV 254


>gi|239994339|ref|ZP_04714863.1| putative transport protein (ABC superfamily, membrane) [Alteromonas
           macleodii ATCC 27126]
          Length = 258

 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 122/217 (56%), Gaps = 1/217 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +I+Q+Y VGV  + ++++     G V+A QG   L  +GAE     ++++  LRE+G ++
Sbjct: 41  VIKQLYVVGVQSLLIIMVSGLFIGMVMALQGYTILVDYGAEGSLGPMVALSLLRELGPVV 100

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +++PR WA ++++P+L I+ +
Sbjct: 101 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRIVAPRFWAGMLAMPMLAIIFS 160

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334
              I+G  +V   +  +    ++S   ST     ++  G+IK+   A  +  +A+ +G+ 
Sbjct: 161 AIGILGGHLVGVDWLGVDAGSYWSIMQSTVDWNQDVINGVIKSLVFALVVTWIAIFKGYD 220

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
               S  + K  T  VV S   V+ +D +     F I
Sbjct: 221 SIPTSEGISKATTETVVYSSLAVLGLDFVLTALMFGI 257


>gi|152985726|ref|YP_001350363.1| ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150960884|gb|ABR82909.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7]
          Length = 265

 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 121/216 (56%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y VGV  + ++++     G V+A QG   L  +G+E     ++++  LRE+G ++
Sbjct: 48  LVKQLYSVGVLSLAIIVVSGLFIGMVLALQGYNILISYGSEQAVGQMVALTLLRELGPVV 107

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           T ++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  IS+PLL  + +
Sbjct: 108 TGLLFAGRAGSALTAEIGNMKATEQLSSLEMIGVDPLKYIVAPRLWAGFISMPLLAAIFS 167

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G ++V   +  +    F++   ++     ++  G+IK+   A  +  +A+ +G+ 
Sbjct: 168 VVGIWGGAMVAVDWLGVYEGSFWANMQNSVQFTEDVLNGVIKSIVFAFVVTWIAVYQGYD 227

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV +   V+ +D +     F 
Sbjct: 228 CEPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 263


>gi|193065385|ref|ZP_03046456.1| toluene ABC transporter, permease protein [Escherichia coli E22]
 gi|192927026|gb|EDV81649.1| toluene ABC transporter, permease protein [Escherichia coli E22]
          Length = 260

 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 118/218 (54%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y VGV  + ++++     G V+  QG   L+ + AE     L+++  LRE+G ++
Sbjct: 44  LVRQLYNVGVLSMLIIVVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ AGR+GSA+ AEIG M+  E++ ++  M +D +R +ISPR WA +ISLPLLT++  
Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFV 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
              I G S+  V WK  D  F  F+S   +      ++   LIK+   A  +  +++  G
Sbjct: 164 AVGIWGGSLVGVSWKGIDSGF--FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV S   V+ +D +     F 
Sbjct: 222 YDAIPTSAGISRATTRTVVHSSLAVLGVDFVLTALMFG 259


>gi|190343261|gb|ACE75649.1| ABC transporter permease protein [Candidatus Nitrospira defluvii]
          Length = 259

 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 107/206 (51%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+ + GV  +PV  +I+ + G +I  Q   QL + GA      ++ +  +RE+G L+
Sbjct: 45  LVRQILFTGVDALPVTTVIALLLGIIIVTQAGTQLPRLGAGGLVGSIIVVTVIRELGPLI 104

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA ++ GRSG+AI  E+G+M +  E+ A+R MG+   R +I PR+  +++S+  LT+  +
Sbjct: 105 TAFIVVGRSGTAIATELGNMSVTREVVALRLMGISISRFVIMPRMVGMVLSMLCLTLYFD 164

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             A++G  ++      IPF  F        +  ++    IK      A+  +    G AV
Sbjct: 165 VVAVLGGYLIADAQLTIPFYAFVESITKALSTTDVLMTAIKGLSFGSAVAAICCYHGLAV 224

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361
                 + ++ T  ++ S  + ++ID
Sbjct: 225 RSSFTEVPQQTTRAMINSFVLCLLID 250


>gi|261344896|ref|ZP_05972540.1| toluene tolerance ABC efflux transporter, permease [Providencia
           rustigianii DSM 4541]
 gi|282567036|gb|EFB72571.1| toluene tolerance ABC efflux transporter, permease [Providencia
           rustigianii DSM 4541]
          Length = 260

 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 117/210 (55%), Gaps = 7/210 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           L++Q+Y VGV  + +V +     G V+  QG   L+ F AE  S+ +M  L L RE+G +
Sbjct: 44  LMQQLYSVGVQSLLIVAVSGLFIGMVLGLQGYLVLTTFSAEA-SLGMMVALSLLRELGPV 102

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGR+GSA+ AEIG MK  E+I ++  M +D +R +I+PR WA  IS+PLL+++ 
Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLRRVIAPRFWAGFISMPLLSLIF 162

Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKE 331
               IIG +I  V WK  D  F  F+S   S+     +I    IK+   A  +  +A+  
Sbjct: 163 VAVGIIGGAIVGVDWKGIDPGF--FWSSMQSSIEWRLDIVNCFIKSLVFAITVTWIALFN 220

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           G+     S  + +  T  VV +   V+ +D
Sbjct: 221 GYDAIPTSEGISRATTKTVVHASLSVLGLD 250


>gi|91215888|ref|ZP_01252857.1| ABC transporter permease protein [Psychroflexus torquis ATCC
           700755]
 gi|91185865|gb|EAS72239.1| ABC transporter permease protein [Psychroflexus torquis ATCC
           700755]
          Length = 262

 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 120/221 (54%), Gaps = 4/221 (1%)

Query: 141 EFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSI 200
           E   S +++K     LIRQ + +G     +V +  F+ G V   Q    L +FGA  +  
Sbjct: 33  EVVTSPFEWK----ELIRQCFQMGNRSFLLVGVTGFILGLVFTLQSRPTLLEFGAVSWMP 88

Query: 201 DLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRI 260
            ++SI  +REIG ++ A++ AGR GS+I AE+GSMK+ E+IDA+   G +  + L+  RI
Sbjct: 89  SMVSISIVREIGPVIIALICAGRIGSSIGAELGSMKVTEQIDAMEVSGTNPFKYLVVTRI 148

Query: 261 WALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320
            A  + LPLL I+ +  A+ G++IV     ++ + ++F++       ++I    IK+ F 
Sbjct: 149 LATTLMLPLLIIMGDAVALFGSAIVENLMGEVSYLLYFNKVFDALKFSDIIPATIKSFFF 208

Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
             AIG+V   +G+     +  +G+     VV +  ++ +ID
Sbjct: 209 GFAIGLVGCYKGYNCSKGTVGVGEASNAAVVYTSMLLFVID 249


>gi|74313731|ref|YP_312150.1| hypothetical protein SSON_3342 [Shigella sonnei Ss046]
 gi|73857208|gb|AAZ89915.1| conserved hypothetical protein [Shigella sonnei Ss046]
          Length = 260

 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 118/218 (54%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y VGV  + ++++     G V+  QG   L+ + AE     L+++  LRE+G ++
Sbjct: 44  LVRQLYNVGVLSMLIIVVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ AGR+GSA+ AEIG M+  E++ ++  M +D +R +ISPR WA +ISLPLLT++  
Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFV 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
              I G S+  V WK  D  F  F+S   +      ++   LIK+   A  +  +++  G
Sbjct: 164 AVGIWGGSLVGVSWKGIDSGF--FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV S   V+ +D +     F 
Sbjct: 222 YDTIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|220904331|ref|YP_002479643.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219868630|gb|ACL48965.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 375

 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 139/289 (48%), Gaps = 9/289 (3%)

Query: 78  IEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVIS 137
           +E+L  L      K   ++K +   F      +   +  ++  F+N        +G V  
Sbjct: 89  LERLLKLAFAVPAKAGSDRKKEELNFVQRVGQVAIDLPPRVTDFLN-------FVGDVTL 141

Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
             G       + +     L+  M   GV  +P++ + S + G ++A  GA QL+QFGA+I
Sbjct: 142 AVGRLFVGRTQMRP--QDLLAAMQECGVQALPIISITSMLFGLILAFVGAVQLTQFGAQI 199

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
           +   L+ I  LR +G ++  V++AGR G+A  A IG+M++NEE+DA+ T+G+  V  L+ 
Sbjct: 200 YVAGLVGIGMLRVMGAVMVGVVMAGRVGAAYAALIGTMQVNEEVDALATLGIAPVDFLVL 259

Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
           PR+ AL   +PLLT+ A+   ++G  IV     +I    + +         ++F GL   
Sbjct: 260 PRVVALTAMIPLLTLYADLMGVVGGYIVATTMLNINPMEYINATMQMVPYKHVFIGLAYG 319

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
                 I +    +G   G  + ++G   TT VV +I  +I+  ++  +
Sbjct: 320 TVFGVIIAMTGCYQGMRCGRSAQAVGLATTTAVVHAIVGIIVATAVITV 368


>gi|325579009|ref|ZP_08148965.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Haemophilus
           parainfluenzae ATCC 33392]
 gi|325159244|gb|EGC71378.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Haemophilus
           parainfluenzae ATCC 33392]
          Length = 261

 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 134/260 (51%), Gaps = 8/260 (3%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           +G+ ++KF         +L       G         K F L L++Q++ +GV  + +++L
Sbjct: 9   LGRSVIKFFRALGRSGFML------FGALVGKPQVRKHFPL-LVKQLHVLGVQSLLIILL 61

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
                G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG
Sbjct: 62  SGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIG 121

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
            MK  E++ ++  M +D +R +I+PR WA +I++P+L +L     I G ++V   +  + 
Sbjct: 122 LMKATEQLSSLEMMAVDPLRRVIAPRFWAGLIAMPILALLFTAIGIWGGALVGVDWKGVD 181

Query: 294 FAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
              F+S   +  + + +I  G IK+ F A A+  +A+  G+     S  + +  T  VV 
Sbjct: 182 AGSFWSVMQNAVSWSYDILNGFIKSVFFAIAVVWIALFNGYDCIPTSEGISQATTRTVVH 241

Query: 353 SISIVIIIDSLFAIFYFAIG 372
           +  +V+ +D +     F  G
Sbjct: 242 ASLVVLGLDFILTAIMFGAG 261


>gi|320322486|gb|EFW78579.1| putative ABC transport system permease protein [Pseudomonas
           syringae pv. glycinea str. B076]
          Length = 265

 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 126/216 (58%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y VGV  + ++++     G V+A QG   L+++G+E     ++++  LRE+G ++
Sbjct: 48  LVRQLYSVGVVSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVV 107

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  IS+P+L ++ +
Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFS 167

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFA 334
              I GAS V   +  +    F+S   ++ +  N +  G+IK+   A  +  +A+ +G+ 
Sbjct: 168 VVGIWGASWVAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYD 227

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV +   V+ +D +     F 
Sbjct: 228 CEPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 263


>gi|320174559|gb|EFW49695.1| Uncharacterized ABC transporter, permease component YrbE [Shigella
           dysenteriae CDC 74-1112]
          Length = 260

 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 118/218 (54%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y VGV  + ++++     G V+  QG   L+ + AE     L+++  LRE+G ++
Sbjct: 44  LVRQLYNVGVLSMLIIVVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ AGR+GSA+ AEIG M+  E++ ++  M +D +R +ISPR WA +ISLPLLT++  
Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFV 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
              I G S+  V WK  D  F  F+S   +      ++   LIK+   A  +  +++  G
Sbjct: 164 AVGIWGGSLVGVSWKGIDSGF--FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV S   V+ +D +     F 
Sbjct: 222 YDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|309785522|ref|ZP_07680153.1| toluene tolerance protein Ttg2B [Shigella dysenteriae 1617]
 gi|308926642|gb|EFP72118.1| toluene tolerance protein Ttg2B [Shigella dysenteriae 1617]
          Length = 235

 Score =  102 bits (255), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 118/218 (54%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y VGV  + ++++     G V+  QG   L+ + AE     L+++  LRE+G ++
Sbjct: 19  LVRQLYNVGVLSMLIIVVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 78

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ AGR+GSA+ AEIG M+  E++ ++  M +D +R +ISPR WA +ISLPLLTI+  
Sbjct: 79  AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFV 138

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
              I G S+  V WK  D  F  F+S   +      ++   LIK+   A  +  +++  G
Sbjct: 139 AVGIWGGSLVGVSWKGIDSGF--FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNG 196

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV S   V+ +D +     F 
Sbjct: 197 YDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 234


>gi|238751354|ref|ZP_04612847.1| hypothetical protein yrohd0001_15400 [Yersinia rohdei ATCC 43380]
 gi|238710412|gb|EEQ02637.1| hypothetical protein yrohd0001_15400 [Yersinia rohdei ATCC 43380]
          Length = 260

 Score =  102 bits (255), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 119/219 (54%), Gaps = 7/219 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           L++Q+Y VGV  + ++++     G V+  QG   L+ + AE  S+ +M  L L RE+G +
Sbjct: 44  LVKQLYSVGVQSLLIIVVSGLFIGMVLGLQGFLILTTYSAEA-SLGMMVALSLLRELGPV 102

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGR+GSA+ AEIG MK  E+I ++  M +D +R +++PR WA +IS+PLLT + 
Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIF 162

Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331
               I G ++  V WK  D  F  F+S   +      ++   LIK+   A  +  +A+  
Sbjct: 163 VAVGIWGGAVVGVDWKGIDGGF--FWSAMQNAVEWRTDLLNCLIKSLVFAITVTWIALFN 220

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 221 GYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|15803734|ref|NP_289768.1| hypothetical protein Z4557 [Escherichia coli O157:H7 EDL933]
 gi|15833327|ref|NP_312100.1| hypothetical protein ECs4073 [Escherichia coli O157:H7 str. Sakai]
 gi|16131084|ref|NP_417661.1| ABC transporter maintaining OM lipid asymmetry, inner membrane
           permease protein [Escherichia coli str. K-12 substr.
           MG1655]
 gi|24114483|ref|NP_708993.1| integral membrane protein [Shigella flexneri 2a str. 301]
 gi|26249780|ref|NP_755820.1| hypothetical protein c3954 [Escherichia coli CFT073]
 gi|30064532|ref|NP_838703.1| integral membrane protein [Shigella flexneri 2a str. 2457T]
 gi|82545568|ref|YP_409515.1| hypothetical protein SBO_3188 [Shigella boydii Sb227]
 gi|89109957|ref|AP_003737.1| predicted toluene transporter subunit [Escherichia coli str. K-12
           substr. W3110]
 gi|91212619|ref|YP_542605.1| hypothetical protein UTI89_C3630 [Escherichia coli UTI89]
 gi|110643434|ref|YP_671164.1| hypothetical protein ECP_3281 [Escherichia coli 536]
 gi|110807060|ref|YP_690580.1| integral membrane protein [Shigella flexneri 5 str. 8401]
 gi|117625486|ref|YP_858809.1| putative toluene transporter subunit: permease component
           [Escherichia coli APEC O1]
 gi|157156689|ref|YP_001464672.1| toluene ABC transporter, permease protein [Escherichia coli
           E24377A]
 gi|157162678|ref|YP_001459996.1| toluene ABC transporter, permease protein [Escherichia coli HS]
 gi|168751600|ref|ZP_02776622.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4113]
 gi|168754176|ref|ZP_02779183.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4401]
 gi|168763731|ref|ZP_02788738.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4501]
 gi|168769050|ref|ZP_02794057.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4486]
 gi|168777249|ref|ZP_02802256.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4196]
 gi|168781338|ref|ZP_02806345.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4076]
 gi|168786080|ref|ZP_02811087.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC869]
 gi|168800908|ref|ZP_02825915.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC508]
 gi|170018556|ref|YP_001723510.1| hypothetical protein EcolC_0506 [Escherichia coli ATCC 8739]
 gi|170082728|ref|YP_001732048.1| toluene ABC transporter membrane protein [Escherichia coli str.
           K-12 substr. DH10B]
 gi|170684208|ref|YP_001745466.1| toluene ABC transporter permease [Escherichia coli SMS-3-5]
 gi|187733158|ref|YP_001881891.1| toluene ABC transporter permease [Shigella boydii CDC 3083-94]
 gi|188492313|ref|ZP_02999583.1| toluene ABC transporter, permease protein [Escherichia coli 53638]
 gi|191168635|ref|ZP_03030417.1| toluene ABC transporter, permease protein [Escherichia coli B7A]
 gi|191174475|ref|ZP_03035975.1| toluene ABC transporter, permease protein [Escherichia coli F11]
 gi|193070286|ref|ZP_03051229.1| toluene ABC transporter, permease protein [Escherichia coli
           E110019]
 gi|194429132|ref|ZP_03061662.1| toluene ABC transporter, permease protein [Escherichia coli B171]
 gi|194434508|ref|ZP_03066768.1| toluene ABC transporter, permease protein [Shigella dysenteriae
           1012]
 gi|194439172|ref|ZP_03071253.1| toluene ABC transporter, permease protein [Escherichia coli 101-1]
 gi|195940050|ref|ZP_03085432.1| toluene ABC transporter membrane protein [Escherichia coli O157:H7
           str. EC4024]
 gi|208805807|ref|ZP_03248144.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4206]
 gi|208814152|ref|ZP_03255481.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4045]
 gi|208818401|ref|ZP_03258721.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4042]
 gi|209399676|ref|YP_002272664.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4115]
 gi|209920669|ref|YP_002294753.1| putative ABC transporter permease [Escherichia coli SE11]
 gi|215488510|ref|YP_002330941.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Escherichia coli O127:H6 str. E2348/69]
 gi|217327544|ref|ZP_03443627.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. TW14588]
 gi|218555764|ref|YP_002388677.1| toluene ABC transporter membrane protein [Escherichia coli IAI1]
 gi|218560264|ref|YP_002393177.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli S88]
 gi|218691484|ref|YP_002399696.1| toluene ABC transporter membrane protein [Escherichia coli ED1a]
 gi|218696899|ref|YP_002404566.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli 55989]
 gi|218701963|ref|YP_002409592.1| toluene ABC transporter membrane protein [Escherichia coli IAI39]
 gi|218706814|ref|YP_002414333.1| toluene ABC transporter membrane protein [Escherichia coli UMN026]
 gi|227887915|ref|ZP_04005720.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Escherichia coli 83972]
 gi|237706054|ref|ZP_04536535.1| integral membrane protein [Escherichia sp. 3_2_53FAA]
 gi|238902296|ref|YP_002928092.1| putative toluene transporter subunit: membrane component of ABC
           superfamily [Escherichia coli BW2952]
 gi|253771972|ref|YP_003034803.1| hypothetical protein ECBD_0548 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254038359|ref|ZP_04872417.1| toluene ABC transporter membrane protein [Escherichia sp. 1_1_43]
 gi|254163136|ref|YP_003046244.1| putative toluene transporter subunit membrane component of ABC
           superfamily [Escherichia coli B str. REL606]
 gi|254795143|ref|YP_003079980.1| putative toluene ABC transporter membrane protein [Escherichia coli
           O157:H7 str. TW14359]
 gi|256018887|ref|ZP_05432752.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily protein [Shigella sp. D9]
 gi|256024231|ref|ZP_05438096.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily protein [Escherichia sp. 4_1_40B]
 gi|260846007|ref|YP_003223785.1| putative toluene transporter subunit [Escherichia coli O103:H2 str.
           12009]
 gi|260857321|ref|YP_003231212.1| putative toluene transporter subunit [Escherichia coli O26:H11 str.
           11368]
 gi|260869945|ref|YP_003236347.1| putative toluene transporter subunit [Escherichia coli O111:H- str.
           11128]
 gi|261228205|ref|ZP_05942486.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily protein [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261255061|ref|ZP_05947594.1| putative toluene transporter subunit [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291284568|ref|YP_003501386.1| hypothetical protein G2583_3919 [Escherichia coli O55:H7 str.
           CB9615]
 gi|293406803|ref|ZP_06650729.1| ABC transporter [Escherichia coli FVEC1412]
 gi|293412565|ref|ZP_06655288.1| conserved hypothetical protein [Escherichia coli B354]
 gi|293416623|ref|ZP_06659262.1| inner membrane protein yrbE [Escherichia coli B185]
 gi|293449527|ref|ZP_06663948.1| UPF0393 inner membrane protein yrbE [Escherichia coli B088]
 gi|298382544|ref|ZP_06992141.1| ABC transport system permease [Escherichia coli FVEC1302]
 gi|300817551|ref|ZP_07097767.1| toluene tolerance protein Ttg2B [Escherichia coli MS 107-1]
 gi|300823840|ref|ZP_07103964.1| toluene tolerance protein Ttg2B [Escherichia coli MS 119-7]
 gi|300897962|ref|ZP_07116338.1| toluene tolerance protein Ttg2B [Escherichia coli MS 198-1]
 gi|300904386|ref|ZP_07122234.1| toluene tolerance protein Ttg2B [Escherichia coli MS 84-1]
 gi|300918956|ref|ZP_07135511.1| toluene tolerance protein Ttg2B [Escherichia coli MS 115-1]
 gi|300926061|ref|ZP_07141883.1| toluene tolerance protein Ttg2B [Escherichia coli MS 182-1]
 gi|300929890|ref|ZP_07145332.1| toluene tolerance protein Ttg2B [Escherichia coli MS 187-1]
 gi|300938110|ref|ZP_07152884.1| toluene tolerance protein Ttg2B [Escherichia coli MS 21-1]
 gi|300948849|ref|ZP_07162914.1| toluene tolerance protein Ttg2B [Escherichia coli MS 116-1]
 gi|300955783|ref|ZP_07168125.1| toluene tolerance protein Ttg2B [Escherichia coli MS 175-1]
 gi|300979957|ref|ZP_07174809.1| toluene tolerance protein Ttg2B [Escherichia coli MS 200-1]
 gi|300990924|ref|ZP_07179376.1| toluene tolerance protein Ttg2B [Escherichia coli MS 45-1]
 gi|301022096|ref|ZP_07186022.1| toluene tolerance protein Ttg2B [Escherichia coli MS 69-1]
 gi|301025904|ref|ZP_07189391.1| toluene tolerance protein Ttg2B [Escherichia coli MS 196-1]
 gi|301047959|ref|ZP_07195004.1| toluene tolerance protein Ttg2B [Escherichia coli MS 185-1]
 gi|301306740|ref|ZP_07212794.1| toluene tolerance protein Ttg2B [Escherichia coli MS 124-1]
 gi|301326373|ref|ZP_07219737.1| toluene tolerance protein Ttg2B [Escherichia coli MS 78-1]
 gi|301644908|ref|ZP_07244877.1| toluene tolerance protein Ttg2B [Escherichia coli MS 146-1]
 gi|306816464|ref|ZP_07450596.1| toluene ABC transporter, permease protein [Escherichia coli NC101]
 gi|307139880|ref|ZP_07499236.1| toluene ABC transporter, permease protein [Escherichia coli H736]
 gi|307313101|ref|ZP_07592727.1| protein of unknown function DUF140 [Escherichia coli W]
 gi|309793773|ref|ZP_07688199.1| toluene tolerance protein Ttg2B [Escherichia coli MS 145-7]
 gi|312968467|ref|ZP_07782676.1| toluene tolerance protein Ttg2B [Escherichia coli 2362-75]
 gi|312972532|ref|ZP_07786706.1| toluene tolerance protein Ttg2B [Escherichia coli 1827-70]
 gi|331643892|ref|ZP_08345023.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli H736]
 gi|331648994|ref|ZP_08350082.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli M605]
 gi|331654798|ref|ZP_08355798.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli M718]
 gi|331659481|ref|ZP_08360423.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli TA206]
 gi|331664807|ref|ZP_08365712.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli TA143]
 gi|331670021|ref|ZP_08370866.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli TA271]
 gi|331674724|ref|ZP_08375483.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli TA280]
 gi|331679273|ref|ZP_08379945.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli H591]
 gi|331684841|ref|ZP_08385433.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli H299]
 gi|54040598|sp|P64607|MLAE_ECOL6 RecName: Full=Probable phospholipid ABC transporter permease
           protein mlaE
 gi|54040599|sp|P64608|MLAE_ECO57 RecName: Full=Probable phospholipid ABC transporter permease
           protein mlaE
 gi|54040600|sp|P64609|MLAE_SHIFL RecName: Full=Probable phospholipid ABC transporter permease
           protein mlaE
 gi|54042861|sp|P64606|MLAE_ECOLI RecName: Full=Probable phospholipid ABC transporter permease
           protein mlaE
 gi|12517809|gb|AAG58328.1|AE005547_14 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
 gi|26110208|gb|AAN82394.1|AE016767_154 Hypothetical protein yrbE [Escherichia coli CFT073]
 gi|606132|gb|AAA57995.1| ORF_f260 [Escherichia coli str. K-12 substr. MG1655]
 gi|1789585|gb|AAC76226.1| ABC transporter maintaining OM lipid asymmetry, inner membrane
           permease protein [Escherichia coli str. K-12 substr.
           MG1655]
 gi|13363546|dbj|BAB37496.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|24053666|gb|AAN44700.1| integral membrane protein [Shigella flexneri 2a str. 301]
 gi|30042791|gb|AAP18514.1| integral membrane protein [Shigella flexneri 2a str. 2457T]
 gi|81246979|gb|ABB67687.1| conserved hypothetical protein [Shigella boydii Sb227]
 gi|85675988|dbj|BAE77238.1| predicted toluene transporter subunit [Escherichia coli str. K12
           substr. W3110]
 gi|91074193|gb|ABE09074.1| hypothetical protein UTI89_C3630 [Escherichia coli UTI89]
 gi|110345026|gb|ABG71263.1| putative membrane protein [Escherichia coli 536]
 gi|110616608|gb|ABF05275.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
 gi|115514610|gb|ABJ02685.1| putative toluene transporter subunit: permease component
           [Escherichia coli APEC O1]
 gi|157068358|gb|ABV07613.1| toluene ABC transporter, permease protein [Escherichia coli HS]
 gi|157078719|gb|ABV18427.1| toluene ABC transporter, permease protein [Escherichia coli
           E24377A]
 gi|169753484|gb|ACA76183.1| protein of unknown function DUF140 [Escherichia coli ATCC 8739]
 gi|169890563|gb|ACB04270.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Escherichia coli str. K-12 substr. DH10B]
 gi|170521926|gb|ACB20104.1| toluene ABC transporter, permease protein [Escherichia coli
           SMS-3-5]
 gi|187430150|gb|ACD09424.1| toluene ABC transporter, permease protein [Shigella boydii CDC
           3083-94]
 gi|187767468|gb|EDU31312.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4196]
 gi|188014389|gb|EDU52511.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4113]
 gi|188487512|gb|EDU62615.1| toluene ABC transporter, permease protein [Escherichia coli 53638]
 gi|189001139|gb|EDU70125.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4076]
 gi|189358631|gb|EDU77050.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4401]
 gi|189361791|gb|EDU80210.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4486]
 gi|189366134|gb|EDU84550.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4501]
 gi|189373916|gb|EDU92332.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC869]
 gi|189376865|gb|EDU95281.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC508]
 gi|190901329|gb|EDV61096.1| toluene ABC transporter, permease protein [Escherichia coli B7A]
 gi|190905230|gb|EDV64869.1| toluene ABC transporter, permease protein [Escherichia coli F11]
 gi|192956345|gb|EDV86805.1| toluene ABC transporter, permease protein [Escherichia coli
           E110019]
 gi|194412857|gb|EDX29149.1| toluene ABC transporter, permease protein [Escherichia coli B171]
 gi|194417287|gb|EDX33396.1| toluene ABC transporter, permease protein [Shigella dysenteriae
           1012]
 gi|194421868|gb|EDX37874.1| toluene ABC transporter, permease protein [Escherichia coli 101-1]
 gi|208725608|gb|EDZ75209.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4206]
 gi|208735429|gb|EDZ84116.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4045]
 gi|208738524|gb|EDZ86206.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4042]
 gi|209161076|gb|ACI38509.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4115]
 gi|209758098|gb|ACI77361.1| hypothetical protein ECs4073 [Escherichia coli]
 gi|209758100|gb|ACI77362.1| hypothetical protein ECs4073 [Escherichia coli]
 gi|209758102|gb|ACI77363.1| hypothetical protein ECs4073 [Escherichia coli]
 gi|209758104|gb|ACI77364.1| hypothetical protein ECs4073 [Escherichia coli]
 gi|209758106|gb|ACI77365.1| hypothetical protein ECs4073 [Escherichia coli]
 gi|209913928|dbj|BAG79002.1| putative ABC transporter permease component [Escherichia coli SE11]
 gi|215266582|emb|CAS11021.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Escherichia coli O127:H6 str. E2348/69]
 gi|217319911|gb|EEC28336.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. TW14588]
 gi|218353631|emb|CAU99839.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli 55989]
 gi|218362532|emb|CAR00156.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli IAI1]
 gi|218367033|emb|CAR04804.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli S88]
 gi|218371949|emb|CAR19805.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli IAI39]
 gi|218429048|emb|CAR09855.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli ED1a]
 gi|218433911|emb|CAR14828.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli UMN026]
 gi|222034911|emb|CAP77654.1| UPF0393 inner membrane protein yrbE [Escherichia coli LF82]
 gi|226839983|gb|EEH72004.1| toluene ABC transporter membrane protein [Escherichia sp. 1_1_43]
 gi|226899094|gb|EEH85353.1| integral membrane protein [Escherichia sp. 3_2_53FAA]
 gi|227835311|gb|EEJ45777.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Escherichia coli 83972]
 gi|238863136|gb|ACR65134.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Escherichia coli BW2952]
 gi|242378737|emb|CAQ33527.1| MlaE, subunit of phospholipid ABC transporter [Escherichia coli
           BL21(DE3)]
 gi|253323016|gb|ACT27618.1| protein of unknown function DUF140 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253975037|gb|ACT40708.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Escherichia coli B str. REL606]
 gi|253979193|gb|ACT44863.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Escherichia coli BL21(DE3)]
 gi|254594543|gb|ACT73904.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Escherichia coli O157:H7 str. TW14359]
 gi|257755970|dbj|BAI27472.1| predicted toluene transporter subunit [Escherichia coli O26:H11
           str. 11368]
 gi|257761154|dbj|BAI32651.1| predicted toluene transporter subunit [Escherichia coli O103:H2
           str. 12009]
 gi|257766301|dbj|BAI37796.1| predicted toluene transporter subunit [Escherichia coli O111:H-
           str. 11128]
 gi|260447779|gb|ACX38201.1| protein of unknown function DUF140 [Escherichia coli DH1]
 gi|281180236|dbj|BAI56566.1| putative ABC transporter permease component [Escherichia coli SE15]
 gi|281602577|gb|ADA75561.1| inner membrane protein yrbE [Shigella flexneri 2002017]
 gi|284923216|emb|CBG36310.1| putative organic solvent tolerance protein [Escherichia coli 042]
 gi|290764441|gb|ADD58402.1| UPF0393 inner membrane protein yrbE [Escherichia coli O55:H7 str.
           CB9615]
 gi|291322617|gb|EFE62046.1| UPF0393 inner membrane protein yrbE [Escherichia coli B088]
 gi|291426809|gb|EFE99841.1| ABC transporter [Escherichia coli FVEC1412]
 gi|291431979|gb|EFF04962.1| inner membrane protein yrbE [Escherichia coli B185]
 gi|291469336|gb|EFF11827.1| conserved hypothetical protein [Escherichia coli B354]
 gi|294493221|gb|ADE91977.1| putative ABC transporter, permease protein [Escherichia coli
           IHE3034]
 gi|298277684|gb|EFI19200.1| ABC transport system permease [Escherichia coli FVEC1302]
 gi|299879926|gb|EFI88137.1| toluene tolerance protein Ttg2B [Escherichia coli MS 196-1]
 gi|300300191|gb|EFJ56576.1| toluene tolerance protein Ttg2B [Escherichia coli MS 185-1]
 gi|300307892|gb|EFJ62412.1| toluene tolerance protein Ttg2B [Escherichia coli MS 200-1]
 gi|300317329|gb|EFJ67113.1| toluene tolerance protein Ttg2B [Escherichia coli MS 175-1]
 gi|300358310|gb|EFJ74180.1| toluene tolerance protein Ttg2B [Escherichia coli MS 198-1]
 gi|300397692|gb|EFJ81230.1| toluene tolerance protein Ttg2B [Escherichia coli MS 69-1]
 gi|300403660|gb|EFJ87198.1| toluene tolerance protein Ttg2B [Escherichia coli MS 84-1]
 gi|300407000|gb|EFJ90538.1| toluene tolerance protein Ttg2B [Escherichia coli MS 45-1]
 gi|300413898|gb|EFJ97208.1| toluene tolerance protein Ttg2B [Escherichia coli MS 115-1]
 gi|300417919|gb|EFK01230.1| toluene tolerance protein Ttg2B [Escherichia coli MS 182-1]
 gi|300451654|gb|EFK15274.1| toluene tolerance protein Ttg2B [Escherichia coli MS 116-1]
 gi|300456873|gb|EFK20366.1| toluene tolerance protein Ttg2B [Escherichia coli MS 21-1]
 gi|300462176|gb|EFK25669.1| toluene tolerance protein Ttg2B [Escherichia coli MS 187-1]
 gi|300523608|gb|EFK44677.1| toluene tolerance protein Ttg2B [Escherichia coli MS 119-7]
 gi|300529849|gb|EFK50911.1| toluene tolerance protein Ttg2B [Escherichia coli MS 107-1]
 gi|300838019|gb|EFK65779.1| toluene tolerance protein Ttg2B [Escherichia coli MS 124-1]
 gi|300846937|gb|EFK74697.1| toluene tolerance protein Ttg2B [Escherichia coli MS 78-1]
 gi|301076759|gb|EFK91565.1| toluene tolerance protein Ttg2B [Escherichia coli MS 146-1]
 gi|305850029|gb|EFM50488.1| toluene ABC transporter, permease protein [Escherichia coli NC101]
 gi|306907012|gb|EFN37520.1| protein of unknown function DUF140 [Escherichia coli W]
 gi|307555287|gb|ADN48062.1| toluene ABC transporter [Escherichia coli ABU 83972]
 gi|307625207|gb|ADN69511.1| toluene ABC transporter, permease protein [Escherichia coli UM146]
 gi|308122730|gb|EFO59992.1| toluene tolerance protein Ttg2B [Escherichia coli MS 145-7]
 gi|309703620|emb|CBJ02960.1| putative organic solvent tolerance protein [Escherichia coli ETEC
           H10407]
 gi|310334909|gb|EFQ01114.1| toluene tolerance protein Ttg2B [Escherichia coli 1827-70]
 gi|312286685|gb|EFR14596.1| toluene tolerance protein Ttg2B [Escherichia coli 2362-75]
 gi|312947751|gb|ADR28578.1| putative toluene transporter subunit [Escherichia coli O83:H1 str.
           NRG 857C]
 gi|313648563|gb|EFS13005.1| toluene tolerance protein Ttg2B [Shigella flexneri 2a str. 2457T]
 gi|315062500|gb|ADT76827.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Escherichia coli W]
 gi|315137780|dbj|BAJ44939.1| hypothetical protein ECDH1ME8569_3083 [Escherichia coli DH1]
 gi|315257122|gb|EFU37090.1| toluene tolerance protein Ttg2B [Escherichia coli MS 85-1]
 gi|315289007|gb|EFU48405.1| toluene tolerance protein Ttg2B [Escherichia coli MS 110-3]
 gi|315294854|gb|EFU54193.1| toluene tolerance protein Ttg2B [Escherichia coli MS 153-1]
 gi|315297940|gb|EFU57210.1| toluene tolerance protein Ttg2B [Escherichia coli MS 16-3]
 gi|315617277|gb|EFU97886.1| toluene tolerance protein Ttg2B [Escherichia coli 3431]
 gi|320181469|gb|EFW56387.1| Uncharacterized ABC transporter, permease component YrbE [Shigella
           boydii ATCC 9905]
 gi|320186681|gb|EFW61405.1| Uncharacterized ABC transporter, permease component YrbE [Shigella
           flexneri CDC 796-83]
 gi|320189547|gb|EFW64206.1| Uncharacterized ABC transporter, permease component YrbE
           [Escherichia coli O157:H7 str. EC1212]
 gi|320194679|gb|EFW69309.1| Uncharacterized ABC transporter, permease component YrbE
           [Escherichia coli WV_060327]
 gi|320202108|gb|EFW76683.1| Uncharacterized ABC transporter, permease component YrbE
           [Escherichia coli EC4100B]
 gi|320645562|gb|EFX14571.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli O157:H- str. 493-89]
 gi|320650872|gb|EFX19329.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli O157:H- str. H 2687]
 gi|320656253|gb|EFX24165.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320661943|gb|EFX29351.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli O55:H7 str. USDA 5905]
 gi|320666778|gb|EFX33757.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli O157:H7 str. LSU-61]
 gi|323154409|gb|EFZ40610.1| toluene tolerance protein Ttg2B [Escherichia coli EPECa14]
 gi|323162886|gb|EFZ48721.1| toluene tolerance protein Ttg2B [Escherichia coli E128010]
 gi|323165155|gb|EFZ50945.1| toluene tolerance protein Ttg2B [Shigella sonnei 53G]
 gi|323173546|gb|EFZ59175.1| toluene tolerance protein Ttg2B [Escherichia coli LT-68]
 gi|323178630|gb|EFZ64206.1| toluene tolerance protein Ttg2B [Escherichia coli 1180]
 gi|323183148|gb|EFZ68546.1| toluene tolerance protein Ttg2B [Escherichia coli 1357]
 gi|323189185|gb|EFZ74469.1| toluene tolerance protein Ttg2B [Escherichia coli RN587/1]
 gi|323376912|gb|ADX49180.1| protein of unknown function DUF140 [Escherichia coli KO11]
 gi|323936112|gb|EGB32406.1| inner membrane protein yrbE [Escherichia coli E1520]
 gi|323941706|gb|EGB37885.1| inner membrane protein yrbE [Escherichia coli E482]
 gi|323946952|gb|EGB42968.1| inner membrane protein yrbE [Escherichia coli H120]
 gi|323951287|gb|EGB47162.1| inner membrane protein yrbE [Escherichia coli H252]
 gi|323957659|gb|EGB53373.1| inner membrane protein yrbE [Escherichia coli H263]
 gi|323961151|gb|EGB56765.1| inner membrane protein yrbE [Escherichia coli H489]
 gi|323966374|gb|EGB61808.1| inner membrane protein yrbE [Escherichia coli M863]
 gi|323970243|gb|EGB65514.1| inner membrane protein yrbE [Escherichia coli TA007]
 gi|323979089|gb|EGB74167.1| inner membrane protein yrbE [Escherichia coli TW10509]
 gi|324008706|gb|EGB77925.1| toluene tolerance protein Ttg2B [Escherichia coli MS 57-2]
 gi|324012162|gb|EGB81381.1| toluene tolerance protein Ttg2B [Escherichia coli MS 60-1]
 gi|324018354|gb|EGB87573.1| toluene tolerance protein Ttg2B [Escherichia coli MS 117-3]
 gi|324119559|gb|EGC13441.1| inner membrane protein yrbE [Escherichia coli E1167]
 gi|326337894|gb|EGD61728.1| Uncharacterized ABC transporter, permease component YrbE
           [Escherichia coli O157:H7 str. 1125]
 gi|326347464|gb|EGD71189.1| Uncharacterized ABC transporter, permease component YrbE
           [Escherichia coli O157:H7 str. 1044]
 gi|327251285|gb|EGE62974.1| toluene tolerance protein Ttg2B [Escherichia coli STEC_7v]
 gi|330909246|gb|EGH37760.1| uncharacterized ABC transporter, permease component YrbE
           [Escherichia coli AA86]
 gi|331037363|gb|EGI09587.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli H736]
 gi|331042741|gb|EGI14883.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli M605]
 gi|331048180|gb|EGI20257.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli M718]
 gi|331054063|gb|EGI26092.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli TA206]
 gi|331058055|gb|EGI30037.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli TA143]
 gi|331062934|gb|EGI34848.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli TA271]
 gi|331068163|gb|EGI39559.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli TA280]
 gi|331073338|gb|EGI44661.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli H591]
 gi|331078456|gb|EGI49662.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli H299]
 gi|332086231|gb|EGI91389.1| toluene tolerance protein Ttg2B [Shigella boydii 5216-82]
 gi|332086452|gb|EGI91599.1| toluene tolerance protein Ttg2B [Shigella dysenteriae 155-74]
 gi|332090701|gb|EGI95795.1| toluene tolerance protein Ttg2B [Shigella boydii 3594-74]
 gi|332102327|gb|EGJ05673.1| membrane component of ABC superfamily [Shigella sp. D9]
          Length = 260

 Score =  102 bits (255), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 118/218 (54%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y VGV  + ++++     G V+  QG   L+ + AE     L+++  LRE+G ++
Sbjct: 44  LVRQLYNVGVLSMLIIVVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ AGR+GSA+ AEIG M+  E++ ++  M +D +R +ISPR WA +ISLPLLT++  
Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFV 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
              I G S+  V WK  D  F  F+S   +      ++   LIK+   A  +  +++  G
Sbjct: 164 AVGIWGGSLVGVSWKGIDSGF--FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV S   V+ +D +     F 
Sbjct: 222 YDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|294634664|ref|ZP_06713197.1| toluene tolerance ABC efflux transporter, permease [Edwardsiella
           tarda ATCC 23685]
 gi|291091910|gb|EFE24471.1| toluene tolerance ABC efflux transporter, permease [Edwardsiella
           tarda ATCC 23685]
          Length = 260

 Score =  102 bits (255), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 118/219 (53%), Gaps = 7/219 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           L RQ+Y VGV  + ++++     G V+  QG   L+ + AE  S+ +M  L L RE+G +
Sbjct: 44  LRRQLYSVGVQSLLIIMVSGLFIGMVLGLQGYLVLTTYSAEA-SLGMMVALSLLRELGPV 102

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +++PR WA +IS+PLLT++ 
Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLTVIF 162

Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331
               I G S+  V WK  D  F  F+S          ++   LIK+   A  +  +A+  
Sbjct: 163 VAIGIWGGSVVGVDWKGIDAGF--FWSAMQGAVDYRTDLLNCLIKSLVFAITVMWIALFN 220

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 221 GYDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|95928284|ref|ZP_01311032.1| protein of unknown function DUF140 [Desulfuromonas acetoxidans DSM
           684]
 gi|95135555|gb|EAT17206.1| protein of unknown function DUF140 [Desulfuromonas acetoxidans DSM
           684]
          Length = 261

 Score =  102 bits (255), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 105/173 (60%), Gaps = 4/173 (2%)

Query: 145 SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204
             YK K     ++RQ++++G + + V++     TG V+  QG + L++FG+  F    ++
Sbjct: 35  PPYKVK----PIVRQIHFIGANSLFVILFTGLFTGMVLGLQGYYTLAKFGSVGFLGGAVA 90

Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264
           +  +RE+G +L A+M+ GR+GSAI AE+G M+ +E+IDA+  M +D +  LI P++ A +
Sbjct: 91  LSLIRELGPVLAALMVIGRAGSAICAEVGIMRNSEQIDALECMAIDPISYLIVPKLVAGL 150

Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
           I++PLLT + +   I G  ++  + +D+    +F   +S+    +I  GL+K+
Sbjct: 151 IAMPLLTAIFDVIGIFGGFMIGVQLFDVSAGSYFQGMYSSVVWLDIEMGLVKS 203


>gi|226939988|ref|YP_002795061.1| ABC transport system permease protein [Laribacter hongkongensis
           HLHK9]
 gi|226714914|gb|ACO74052.1| probable ABC transport system permease protein [Laribacter
           hongkongensis HLHK9]
          Length = 261

 Score =  102 bits (255), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 117/214 (54%), Gaps = 1/214 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           IR++Y+ GV  + ++++     G V+  QG   L +FG+      L+++  LRE+G +L 
Sbjct: 48  IREIYFAGVLSLIIIVVSGTFVGMVLGLQGYTTLMRFGSADALGGLVALSLLRELGPVLA 107

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ A RSGSA+ AEIG MK  E++DA+  M ++ V  +++PR WA ++S+PLL  L + 
Sbjct: 108 AILFASRSGSAMTAEIGLMKATEQLDAMAVMAVNPVARVVAPRFWAGVLSMPLLAALFSV 167

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             I G   V      +    ++S+  +  +L  ++  G+IK+     A+ ++A+ EG+  
Sbjct: 168 MGIFGGYFVGVVMIGLDHGAYWSQMQAAVSLHEDVINGIIKSGVFGVAVTLIAVFEGYDA 227

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              +  +    T  VV S  +++ +D +   F F
Sbjct: 228 QPTAAGVSAATTRTVVTSALVILALDFVLTAFMF 261


>gi|325105498|ref|YP_004275152.1| protein of unknown function DUF140 [Pedobacter saltans DSM 12145]
 gi|324974346|gb|ADY53330.1| protein of unknown function DUF140 [Pedobacter saltans DSM 12145]
          Length = 260

 Score =  102 bits (255), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 124/259 (47%), Gaps = 25/259 (9%)

Query: 96  QKPQRSFFYNSFKNLHYH---IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGF 152
           +KPQ S F     N+ Y    + K IV+F                   E  ++  ++K  
Sbjct: 2   EKPQ-SGFRKKLNNIFYELYLVHKFIVRFFK-----------------ELFSAPVEWK-- 41

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
              +++Q Y +G   + ++ L  F+TG V  +Q    L++FGA  +   L++I  +R + 
Sbjct: 42  --EIMKQCYLLGFKSLSLITLTGFITGIVFTKQSRPSLAEFGATSWLPSLVAIAIIRSLA 99

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            LLTA++ AG+ GS I AE+GSMK+ E+IDA+   G +  + L+  R  A  I++P+LT 
Sbjct: 100 PLLTALITAGKVGSNIGAELGSMKVTEQIDAMEVSGTNPFKFLVVTRTLATTITIPILTF 159

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
                 ++GA + +  + +  +  F      + +  +IF   IKA      IGIV   +G
Sbjct: 160 YTGLVGLLGAFLNVTTFENTSYQAFMQSAFESISFLDIFASTIKAIVFGFTIGIVGCYQG 219

Query: 333 FAVGVHSNSLGKKVTTCVV 351
           +     +  +G+     VV
Sbjct: 220 YNSSKGTEGVGRAANASVV 238


>gi|290476800|ref|YP_003469711.1| putative ABC transporter membrane protein [Xenorhabdus bovienii
           SS-2004]
 gi|289176144|emb|CBJ82949.1| putative transport protein (ABC superfamily, membrane) [Xenorhabdus
           bovienii SS-2004]
          Length = 262

 Score =  102 bits (255), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 119/218 (54%), Gaps = 7/218 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           L +Q+Y VGV  + ++++     G V++ QG   L+ F AE  S+ +M  L L RE+G +
Sbjct: 46  LCQQLYSVGVQSLLIIVVSGLFIGMVLSLQGYLVLTTFSAE-GSLGMMVALSLLRELGPV 104

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGR+GSA+ AEIG MK  E+I ++  M +D +R +I+PR WA  IS+PLL+++ 
Sbjct: 105 VTALLFAGRAGSALTAEIGLMKATEQISSLEMMAIDPLRRVIAPRFWAGFISMPLLSLIF 164

Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331
               IIG +I  V WK  D  F  F+S   S      ++    +K+   A  +  +A+  
Sbjct: 165 VAVGIIGGAIVGVDWKGIDAGF--FWSSMQSAVDWQKDLLNCFLKSVAFAITVTWIALFN 222

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           G+     S  + +  T  VV +   V+ +D +     F
Sbjct: 223 GYDAIPTSEGISRATTRTVVHASLAVLGLDFVLTALMF 260


>gi|319954485|ref|YP_004165752.1| hypothetical protein Celal_2978 [Cellulophaga algicola DSM 14237]
 gi|319423145|gb|ADV50254.1| protein of unknown function DUF140 [Cellulophaga algicola DSM
           14237]
          Length = 258

 Score =  102 bits (255), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 121/221 (54%), Gaps = 4/221 (1%)

Query: 141 EFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSI 200
           E     ++F  FL    RQ Y +G   + +V++  F+ G V+  Q    + QFGA  +  
Sbjct: 29  EALRPPFEFNEFL----RQCYQIGNRSLTLVLVTGFIIGLVLDLQSRPTMIQFGAISWMP 84

Query: 201 DLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRI 260
           +++ I  +RE+G ++TA++ AGR  S I AE+GSM++ E+IDA+   G +  + L+  R+
Sbjct: 85  NMVGISIVRELGPVITALVCAGRISSGIGAELGSMRVTEQIDAMEVSGTNPFKYLVVTRV 144

Query: 261 WALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320
            A I+ LPLL IL++  ++ G++++     ++ F ++F+      +  ++   +IK  F 
Sbjct: 145 MASILMLPLLVILSDAVSLFGSALIENIKGNVSFQLYFNTIFDALSYTDLIPAIIKTFFF 204

Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
             AIG+V   +G+     +  +G    T VV +  ++ +ID
Sbjct: 205 GFAIGLVGCFKGYYCKKGTAGVGIAANTAVVMTSLLLFVID 245


>gi|312888834|ref|ZP_07748397.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM
           18603]
 gi|311298709|gb|EFQ75815.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM
           18603]
          Length = 267

 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 112/213 (52%), Gaps = 4/213 (1%)

Query: 147 YKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206
           Y+FK     +++Q Y VGV  + ++ +  F+ G +  +Q    LS+FGA  +   L+SI 
Sbjct: 46  YEFK----EILKQCYDVGVKSLLLISVTGFIVGVIFTKQSRPSLSEFGATSWLPSLVSIA 101

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            LR +  L+TA++ AG+ GS+I AE+GSM++ E+IDA+   G    + L+  R+ A  I+
Sbjct: 102 ILRALASLVTALIAAGKVGSSIGAELGSMRVTEQIDAMEVSGTKPFKYLVCTRVLATTIT 161

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326
           +PLL     F A++G  + + +     +  F  +     T  + ++ L K+      IGI
Sbjct: 162 IPLLASYTAFIALLGGYLNVSQNEGTSYTTFMEQVFEPLTFIDFWSTLAKSIMFGFTIGI 221

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           V   +G+     +  +GK     VV ++ +V I
Sbjct: 222 VGCYQGYNSSRGTEGVGKAANAAVVTAMFLVFI 254


>gi|295691537|ref|YP_003595230.1| hypothetical protein Cseg_4204 [Caulobacter segnis ATCC 21756]
 gi|295433440|gb|ADG12612.1| protein of unknown function DUF140 [Caulobacter segnis ATCC 21756]
          Length = 269

 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 110/213 (51%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ   +G   +PVV L +  TGA +A        +F AE     ++++   RE+G +L
Sbjct: 53  LLRQFMAIGFFSLPVVGLTAVFTGAALALNIFTGGGRFNAEQVMPQIVALGITRELGPVL 112

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A+M+AGR  +AI AEIG+M+  E+IDA+RT+  D  R L+ PR+ A ++ LPLLT +A+
Sbjct: 113 AALMLAGRVSAAIAAEIGAMRATEQIDAMRTLSTDPFRYLVGPRLLAGVLMLPLLTAVAD 172

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              + G  +V  +  D    V+           +I +GLIKA      + ++    G+  
Sbjct: 173 TIGVAGGWLVATRVLDFSPTVYIRNTIDFLESWDIVSGLIKAAVFGFIVALMGCYHGYNA 232

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
              +  +G+  T  VV S  ++   D L   F+
Sbjct: 233 SGGARGVGRATTHAVVSSAILIFASDYLLTTFF 265


>gi|108762257|ref|YP_631903.1| putative ABC transporter permease [Myxococcus xanthus DK 1622]
 gi|108466137|gb|ABF91322.1| putative ABC transporter, permease protein [Myxococcus xanthus DK
           1622]
          Length = 271

 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 113/217 (52%)

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           L++L  Q+ +VGV  + +V L    TG V A Q +     F AE      +++   RE+ 
Sbjct: 55  LVNLFAQLDFVGVGSIFIVSLTGTFTGMVFALQTSTAFQLFDAESLVGPTVALTLTRELA 114

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            + +A+M+  R+GSA+  E+G+M++ E++DA+ TM ++ V+ L+ PR+ A +  +P LT+
Sbjct: 115 AVFSALMVTMRAGSAMCTELGTMRVTEQVDALETMAVNPVQYLLVPRVLAGLFMVPALTM 174

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           L N   + GA +V      I    F SR        +IF GL+K      ++ ++   +G
Sbjct: 175 LFNTMGMGGAYVVAVGGLGISPGTFLSRTQQWLAPEDIFQGLLKGAVFGLSVSLICCFKG 234

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           F     +  +G+  T  +V S   + I+D +  I +F
Sbjct: 235 FNASGGAKGVGQATTEAMVASALSIFILDFILGILFF 271


>gi|322834661|ref|YP_004214688.1| hypothetical protein Rahaq_3972 [Rahnella sp. Y9602]
 gi|321169862|gb|ADW75561.1| protein of unknown function DUF140 [Rahnella sp. Y9602]
          Length = 260

 Score =  102 bits (254), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 119/219 (54%), Gaps = 7/219 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           LI+Q+Y VGV  + ++++     G V+  QG   L+ + AE  S+ +M  L L RE+G +
Sbjct: 44  LIKQLYSVGVLSLLIILVSGLFIGMVLGLQGYLILTTYSAEA-SLGMMVALSLLRELGPV 102

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGR+GSA+ AE+G MK  E+I ++  M +D +R +++PR WA +IS+PLLT + 
Sbjct: 103 VTALLFAGRAGSALTAELGLMKATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIF 162

Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331
               + G S+  V WK  D  F  F+S   +      ++   LIK+   A  +  +A+  
Sbjct: 163 VAVGVWGGSLVGVDWKGIDSGF--FWSAMQTAVDWRTDLLNCLIKSLVFAITVTWIALFN 220

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 221 GYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|303256524|ref|ZP_07342538.1| toluene tolerance ABC transporter, permease protein
           [Burkholderiales bacterium 1_1_47]
 gi|331000622|ref|ZP_08324280.1| toluene tolerance protein Ttg2B [Parasutterella excrementihominis
           YIT 11859]
 gi|302860015|gb|EFL83092.1| toluene tolerance ABC transporter, permease protein
           [Burkholderiales bacterium 1_1_47]
 gi|329571184|gb|EGG52889.1| toluene tolerance protein Ttg2B [Parasutterella excrementihominis
           YIT 11859]
          Length = 263

 Score =  102 bits (254), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 121/217 (55%), Gaps = 1/217 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           ++Q+Y+VG   + ++++     G V+  QG + LS +G+E     L+++  LRE+G ++T
Sbjct: 47  LKQLYFVGNYSLVIILVSGLFVGFVLGLQGDYVLSSYGSEQALGVLVALSLLRELGPVVT 106

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+G+++ AEIG M   E++ A+  MG+D +R ++ PR  A +IS+PLL I+ + 
Sbjct: 107 ALLFAGRAGTSLTAEIGLMNAGEQLSALEMMGVDPIRRILGPRFLACVISMPLLAIMFSA 166

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAV 335
             IIG+ +V      +    F+++  +   +  +I  G+IK      A+G +A+ EG+  
Sbjct: 167 VGIIGSWVVAVPLIGLDSGAFWAQMQAGVEVGPDIGNGIIKTFVFGVAVGAIALYEGYTA 226

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
                 +    T  VV S  +V+ +D +   F F  G
Sbjct: 227 RATPEGVSSATTRTVVVSSLVVLGLDFILTAFMFTHG 263


>gi|238019665|ref|ZP_04600091.1| hypothetical protein VEIDISOL_01539 [Veillonella dispar ATCC 17748]
 gi|237863706|gb|EEP64996.1| hypothetical protein VEIDISOL_01539 [Veillonella dispar ATCC 17748]
          Length = 242

 Score =  102 bits (254), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 112/212 (52%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +QM ++GV  +P++ L     GAV+  Q    L  +GA+     LM++   RE+G +L  
Sbjct: 31  QQMAHLGVDSLPIISLTLLFAGAVMTLQITDVLITYGAQSTVGGLMAVAMGRELGPILVG 90

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           V++AGR G+AI AEIG+MK+ E+IDA+R M +D +  L+ PR+ A +I +P+L       
Sbjct: 91  VVLAGRVGAAITAEIGTMKVTEQIDALRVMAVDPIGYLVVPRVVACMIMVPILAFYGVVI 150

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            I G   V      +  + +       +T+++   GL+K+      I +V   +G    +
Sbjct: 151 GIAGGYFVATAIKGLAPSTYLDSIQMFSTISDFTLGLVKSSVFGAVIALVGSYKGMETKM 210

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
            + ++G   T+ VV SI +V +++   +   +
Sbjct: 211 GAEAVGFSTTSSVVTSIILVFVLNYFLSTLLY 242


>gi|254423355|ref|ZP_05037073.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
 gi|196190844|gb|EDX85808.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
          Length = 264

 Score =  102 bits (254), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 106/198 (53%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I QM  VG   + + ++ S   G V   Q   +   FGA      +++I   RE+  +LT
Sbjct: 42  IEQMSAVGPESLLIALVTSVFVGMVFTIQVTREFITFGATTAIGGVLAITLSRELAPVLT 101

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV++AGR GSA  AEIG+M++ E+IDA++ +  D V  L+ PR+ A  + +P+L +LA  
Sbjct: 102 AVVLAGRVGSAFAAEIGTMRVTEQIDALQMLRSDPVDYLVIPRVIACALMVPMLNVLAII 161

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           + ++G  +V    Y IPFAVF +   +  T+ ++   LIK+      I ++    G    
Sbjct: 162 TGLLGGLVVATTLYAIPFAVFLNSARNFLTIWDLAASLIKSLIFGVLIAVIGSSWGLTTT 221

Query: 337 VHSNSLGKKVTTCVVQSI 354
             +  +G+  TT VV S+
Sbjct: 222 GGAKGVGQSTTTAVVTSL 239


>gi|284008692|emb|CBA75353.1| conserved hypothetical protein [Arsenophonus nasoniae]
          Length = 261

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 118/219 (53%), Gaps = 7/219 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           LI+Q+Y VG+  + ++ +     G V+  QG   L+ F AE  S+ +M  L L RE+G +
Sbjct: 45  LIKQLYNVGILSLLIIAVSGLFIGMVLGLQGYLVLTMFSAES-SLGMMVALSLLRELGPV 103

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGR+GSA+ AEIG MK  E+I ++  M +D +R +I+PR WA +IS+PLL ++ 
Sbjct: 104 VTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLRRVIAPRFWAGLISMPLLALIF 163

Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331
               I+G ++  V WK  D  F  F+S   S      +I    IK+   A  +  +A+  
Sbjct: 164 VAVGILGGALVGVDWKGIDEGF--FWSSMQSAIEWKKDILNCFIKSVVFAFTVSWIALFN 221

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 222 GYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 260


>gi|169794572|ref|YP_001712365.1| toluene tolerance efflux ABC transporter membrane protein
           [Acinetobacter baumannii AYE]
 gi|213158857|ref|YP_002320855.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB0057]
 gi|215482161|ref|YP_002324343.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii
           AB307-0294]
 gi|260557005|ref|ZP_05829222.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii ATCC
           19606]
 gi|294839769|ref|ZP_06784452.1| toluene tolerance protein Ttg2B [Acinetobacter sp. 6013113]
 gi|294860447|ref|ZP_06798216.1| toluene tolerance protein Ttg2B [Acinetobacter sp. 6013150]
 gi|301347321|ref|ZP_07228062.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB056]
 gi|301510049|ref|ZP_07235286.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB058]
 gi|301597237|ref|ZP_07242245.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB059]
 gi|169147499|emb|CAM85360.1| toluene tolerance efflux transporter (ABC superfamily, membrane)
           [Acinetobacter baumannii AYE]
 gi|213058017|gb|ACJ42919.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB0057]
 gi|213988817|gb|ACJ59116.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii
           AB307-0294]
 gi|260409611|gb|EEX02912.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii ATCC
           19606]
          Length = 259

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 132/250 (52%), Gaps = 10/250 (4%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           +G+ +++ I    + AH+L  +I         S+  KG     + QM+ VGV  + ++ +
Sbjct: 7   LGRLVIERIRGIGAAAHMLLQIIF--------SFPTKGGFGRFVYQMHRVGVMSLLIIAV 58

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
                GAV+  Q    L  FGAE      +S+  LRE+  ++ A++ AGR+GSA+ AEIG
Sbjct: 59  SGLFIGAVLGLQMYSILVTFGAESMLGTAISLTLLRELASVVAALLFAGRAGSALTAEIG 118

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           SMK +E++ ++  +G+D ++ ++SPR+WA I+SLP+LT++     IIG  +V   +    
Sbjct: 119 SMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIIGGKMVGVDFLGAD 178

Query: 294 FAVFFSRFHSTATLA-NIFTG-LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
              F+S   +T     +IF G +IK+   A     VA+ +G+A       +   +T  VV
Sbjct: 179 EGSFWSGMQNTVRFGHDIFNGTIIKSIVFALICTWVAVYQGYACDPTPEGIATAMTRTVV 238

Query: 352 QSISIVIIID 361
            S   V+  D
Sbjct: 239 YSSLCVLGFD 248


>gi|188997595|ref|YP_001931846.1| protein of unknown function DUF140 [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188932662|gb|ACD67292.1| protein of unknown function DUF140 [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 247

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 122/233 (52%), Gaps = 6/233 (2%)

Query: 135 VISNTGE----FCASSYKFKGF--LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
           +I +TG     F  +   FK F  +  +++ M  +GV+  P+++L  F TG V+  +   
Sbjct: 7   LIEHTGNITIFFLRTLLSFKKFPKIKHILKYMEDIGVNAAPLIVLTGFFTGGVLVVETYP 66

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
              +F AE     L+S+   RE+  +L A+++  RSGSAI A IG+M+I E+IDA+  M 
Sbjct: 67  TFHKFNAEFLMGALVSLSLARELSPVLVALLVTARSGSAIAANIGTMRITEQIDALEVMA 126

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +D +R L++PRI   I+ +P LT+L+  S +IG        Y I   +++ +      L 
Sbjct: 127 VDPMRYLVAPRIITAILMVPFLTVLSYTSGVIGGYFTSVYVYGINEYMYWEKLKDFTELK 186

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           +I  GL K+      +  +    G+     +  +G+  TT VV +  +++I+D
Sbjct: 187 DIMGGLYKSAVFGVILVTITAYFGYITKGGAEGVGRSTTTAVVVASVVILILD 239


>gi|167626717|ref|YP_001677217.1| ABC-type transport system permease [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|241667292|ref|ZP_04754870.1| ABC-type transport system permease protein [Francisella
           philomiragia subsp. philomiragia ATCC 25015]
 gi|254875843|ref|ZP_05248553.1| ABC transporter, permease protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|167596718|gb|ABZ86716.1| ABC-type transport system permease protein [Francisella
           philomiragia subsp. philomiragia ATCC 25017]
 gi|254841864|gb|EET20278.1| ABC transporter, permease protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 254

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 113/195 (57%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I Q+  VGV+ + +++      G V++ QG + LS+FGA      ++++  LRE+G ++T
Sbjct: 39  ITQIKAVGVNSIIIIVTSGIFIGLVLSLQGYYTLSKFGAHSLLGVMVALSVLRELGPVVT 98

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+ S+I +EIG MK  ++I++++ M ++ +  ++S R WA +IS P+L ++   
Sbjct: 99  AMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFILSTRFWACVISGPILALIFAT 158

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            AI+   ++      I +  F+S   S+ T+++I  G+IK+   A     +A+ +G+   
Sbjct: 159 VAILAGFVLAEAGLGISYGEFWSNIQSSVTISDITNGIIKSLVFAFITAWIALYQGYYCI 218

Query: 337 VHSNSLGKKVTTCVV 351
             SN + K  T  VV
Sbjct: 219 ADSNGIAKATTKTVV 233


>gi|262042753|ref|ZP_06015907.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|259039978|gb|EEW41095.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
          Length = 260

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 118/218 (54%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y VGV  + ++I+     G V+  QG   L+ + AE     L+++  LRE+G ++
Sbjct: 44  LVRQLYNVGVLSMLIIIVSGLFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGSVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ AGR+GSA+ AEIG M+  E++ ++  M +D +R +ISPR WA +ISLPLLTI+  
Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFV 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
              I G ++  V WK  D  F  F++   +      ++   LIK+   A  +  +A+  G
Sbjct: 164 AVGIWGGALVGVSWKGIDGGF--FWTAMQNAVDWRMDLVNCLIKSLVFAITVTWIALFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV +   V+ +D +     F 
Sbjct: 222 YDAVPTSAGISRATTRTVVHASLAVLGLDFVLTALMFG 259


>gi|293394224|ref|ZP_06638524.1| toluene tolerance ABC superfamily ATP binding cassette transporter,
           membrane protein [Serratia odorifera DSM 4582]
 gi|291423202|gb|EFE96431.1| toluene tolerance ABC superfamily ATP binding cassette transporter,
           membrane protein [Serratia odorifera DSM 4582]
          Length = 260

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 118/219 (53%), Gaps = 7/219 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           L++Q++ VGV  + ++++     G V+  QG   L+ + AE  S+ +M  L L RE+G +
Sbjct: 44  LVKQLHSVGVQSLLIIMVSGLFIGMVLGLQGYLVLTTYSAEA-SLGMMVALSLLRELGPV 102

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGR+GSA+ AEIG MK  E+I ++  M +D +R + +PR WA +IS+PLLTI+ 
Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLRRIAAPRFWAGLISMPLLTIIF 162

Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331
               I G S+  V WK  D  F  F+S          ++   LIK+   A  +  +A+  
Sbjct: 163 VAVGIWGGSVVGVDWKGIDSGF--FWSAMQGAVEWRQDLLNCLIKSVVFAITVTWIAIFN 220

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 221 GYDAVPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|242241047|ref|YP_002989228.1| hypothetical protein Dd703_3649 [Dickeya dadantii Ech703]
 gi|242133104|gb|ACS87406.1| protein of unknown function DUF140 [Dickeya dadantii Ech703]
          Length = 260

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 118/219 (53%), Gaps = 7/219 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           L RQ+Y VGV  + ++I+     G V+  QG   L+ + AE  S+ +M  L L RE+G +
Sbjct: 44  LARQLYSVGVQSLLIIIVSGCFIGMVLGLQGYIVLTTYSAEA-SLGMMVALSLLRELGPV 102

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +++PR WA  IS+PLLT++ 
Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVVAPRFWAGFISMPLLTLIF 162

Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKE 331
               I G ++  V WK  D  F  F+S          ++   ++K+ F A  +  +A+  
Sbjct: 163 VAVGIWGGALVGVDWKGIDSGF--FWSAMQGAVEWRHDVMNCVLKSLFFAMTVTWIALFN 220

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 221 GYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|77918062|ref|YP_355877.1| toluene export protein [Pelobacter carbinolicus DSM 2380]
 gi|77544145|gb|ABA87707.1| ABC-type toluene export protein [Pelobacter carbinolicus DSM 2380]
          Length = 269

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 123/225 (54%), Gaps = 10/225 (4%)

Query: 147 YKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206
           YKF      ++RQ++++G     V++     TG V+A QG + L +FG+E      +++ 
Sbjct: 45  YKFG----PILRQIHFIGSRSSFVILFTGSFTGMVLALQGYYTLRKFGSEGLLGAAVALS 100

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            +RE+G ++ A+M+ GR+GSAI AE+G M+ +E+IDA+  M +D  + L++P+  A I+S
Sbjct: 101 LIRELGPVIAALMVVGRAGSAICAEVGIMRNSEQIDALECMAIDPYKYLMAPKFVAGILS 160

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326
           +PLLT + + + I+G  +V      +    +F + +S+    ++  GL+K+      I  
Sbjct: 161 MPLLTAIFDMAGIVGGYLVGVAMLGVNKGAYFQQMYSSVVWNDVEMGLVKSLIFGLLIIW 220

Query: 327 VAMKEGFAV------GVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           +   +G+ +      G  +  + +  T  VV S   +++ D L +
Sbjct: 221 IGAAKGYYLHLERSGGFGAEGVSRVTTDAVVLSSVAILVWDYLLS 265


>gi|317046704|ref|YP_004114352.1| hypothetical protein Pat9b_0470 [Pantoea sp. At-9b]
 gi|316948321|gb|ADU67796.1| protein of unknown function DUF140 [Pantoea sp. At-9b]
          Length = 260

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 117/217 (53%), Gaps = 5/217 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y VGV  + ++++     G V+  QG   L+ + AE     L+++  LRE+G ++
Sbjct: 44  LVKQLYSVGVMSLLIIMVSGLFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R ++SPR WA  IS+PLL ++  
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVVSPRFWAGFISMPLLALIFT 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
              I G ++  V WK  D  F  F+S   +      +I   +IK+   A  +  +A+  G
Sbjct: 164 AVGIAGGALVGVSWKGIDPGF--FWSAMQNAVDFRTDIINCIIKSAVFAITVTWIALFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           +     S  + +  T  VV +   V+ +D +     F
Sbjct: 222 YDAIPTSEGISRATTRTVVHASLAVLGLDFVLTALMF 258


>gi|116328041|ref|YP_797761.1| membrane protein of an ABC transporter complex [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116120785|gb|ABJ78828.1| Membrane protein of an ABC transporter complex [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
          Length = 259

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 108/208 (51%), Gaps = 4/208 (1%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
            ++ QMY  GV  + VV +++  TG +++      L  FGAE     LM+I   RE+   
Sbjct: 39  EILDQMYITGVGSIFVVSIVAIFTGMIMSLNTGLGLKDFGAEGQIGLLMTITLTREMSPF 98

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA+++A   GSA+ AEIG+MKI+EEIDA+  M +D VR LI PRI    I +P+L + +
Sbjct: 99  MTALILAASIGSAMAAEIGTMKISEEIDALEVMSIDPVRYLIFPRILGFSIMVPVLCVYS 158

Query: 275 NFSAIIGASIVIWKYYDIPFAVF----FSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330
               I+G +IV +    I +  +    F R  S   L +++ G++K       +  ++  
Sbjct: 159 TILGILGGAIVGYFQLGIDYFTYFRDVFDRVASIPGLKDLYVGILKGFIFGVIVSAISCS 218

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVI 358
            G      +  +G+     VV S  +VI
Sbjct: 219 HGLRTSGGAIGVGRATRESVVTSFLMVI 246


>gi|50086238|ref|YP_047748.1| toluene tolerance efflux ABC transporter membrane protein
           [Acinetobacter sp. ADP1]
 gi|49532214|emb|CAG69926.1| toluene tolerance efflux transporter (ABC superfamily, membrane)
           [Acinetobacter sp. ADP1]
          Length = 258

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 110/198 (55%), Gaps = 1/198 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I QMY VGV  + ++ +     G VI  QG   L   G+E     ++S+  LRE+  ++ 
Sbjct: 42  IYQMYRVGVMSLLIITVSGLFIGLVIGLQGYSILVNVGSEAMLGTMVSLTLLRELAPVVA 101

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+GSA+ AEIGSMK +E++ ++  +G+D ++ ++SPR+WA I+SLP+LT++   
Sbjct: 102 ALLFAGRAGSALTAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAA 161

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAV 335
             I+G  +V   +  +    F+S   S      ++  G+IK+   A     +A+ +G+A 
Sbjct: 162 IGILGGKMVGVDFLGVDEGSFWSGMQSNVQFGHDVVNGIIKSIVFALVCTWIAVYQGYAC 221

Query: 336 GVHSNSLGKKVTTCVVQS 353
                 +   +T  VV S
Sbjct: 222 DPTPEGIATSMTRTVVYS 239


>gi|262373545|ref|ZP_06066823.1| toluene tolerance efflux transporter [Acinetobacter junii SH205]
 gi|262311298|gb|EEY92384.1| toluene tolerance efflux transporter [Acinetobacter junii SH205]
          Length = 258

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 113/209 (54%), Gaps = 1/209 (0%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
           S   KG     I QMY VGV  + ++ +     G V+  QG   L   G+E     ++S+
Sbjct: 31  SMPSKGGFQRFIYQMYRVGVMSLLIISVSGLFIGLVLGLQGYSILVNVGSEAMLGTMVSL 90

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
             LRE+  ++ A++ AGR+GSA+ AEIGSMK +E++ ++  +G+D ++ ++SPR+WA I+
Sbjct: 91  TLLRELAPVVAALLFAGRAGSALTAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIV 150

Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAI 324
           SLP+LT++     I+G  +V   +  +    F+    S+     ++  G+IK+   A   
Sbjct: 151 SLPMLTVIFAAIGIVGGKLVGVDFLGVDEGSFWGGMQSSVQFGHDVVNGIIKSVVFALIC 210

Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
             VA+ +G+A       +   +T  VV S
Sbjct: 211 TWVAVYQGYACDPTPEGIATSMTRTVVYS 239


>gi|183597953|ref|ZP_02959446.1| hypothetical protein PROSTU_01302 [Providencia stuartii ATCC 25827]
 gi|188022725|gb|EDU60765.1| hypothetical protein PROSTU_01302 [Providencia stuartii ATCC 25827]
          Length = 260

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 119/219 (54%), Gaps = 7/219 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           LI+Q+Y VGV  + +V +     G V+  QG   L+ F AE  S+ +M  L L RE+G +
Sbjct: 44  LIKQLYAVGVQSLLIVAVSGLFIGMVLGLQGYLVLTTFSAEA-SLGMMVALSLLRELGPV 102

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGR+GSA+ AEIG MK  E+I ++  M +D +R +I+PR WA  IS+PLL+++ 
Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLRRVIAPRFWAGFISMPLLSLIF 162

Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331
               I+G ++  V WK  D  F  F++   S+     +I    IK+   A  +  +A+  
Sbjct: 163 VAVGILGGALVGVDWKGIDEGF--FWASMQSSVDWRMDIVNCFIKSLVFAITVTWIALFN 220

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G+     S  + +  T  VV +   V+ +D +     F 
Sbjct: 221 GYDAIPTSEGISQATTRTVVHASLAVLGLDFVLTALMFG 259


>gi|323143323|ref|ZP_08078012.1| toluene tolerance protein Ttg2B [Succinatimonas hippei YIT 12066]
 gi|322416895|gb|EFY07540.1| toluene tolerance protein Ttg2B [Succinatimonas hippei YIT 12066]
          Length = 257

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 119/223 (53%), Gaps = 1/223 (0%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
            FK     LI Q+Y+VGV  V ++++     G V+  QG   L  F A      L+++  
Sbjct: 35  DFKKHFPLLISQIYFVGVQSVIIILVSGLFIGMVLGLQGFNILKDFMATGSLGTLVALAI 94

Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267
           +RE+G ++TA++ AGR+GSA+ AEIG +K +E++ ++  M +D +R +ISPR WA  IS+
Sbjct: 95  IRELGPVVTALLYAGRAGSALTAEIGQLKASEQLSSMEMMAVDPLRRIISPRFWAGAISM 154

Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGI 326
           PLL+I+     I G  +V   +  +   +++S   S+  L  +I   ++K+   A     
Sbjct: 155 PLLSIMFCLVGIYGGKLVGVDWLGLDDGIYWSGMQSSVDLVEDIGCMVVKSIVFAIVCTW 214

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           +A+  G+     S+ +    T  VVQS   V+ +D +     F
Sbjct: 215 IALFNGYDCTPTSSGISNATTATVVQSSLAVLGLDFVLTALMF 257


>gi|92114341|ref|YP_574269.1| hypothetical protein Csal_2219 [Chromohalobacter salexigens DSM
           3043]
 gi|91797431|gb|ABE59570.1| protein of unknown function DUF140 [Chromohalobacter salexigens DSM
           3043]
          Length = 260

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 121/215 (56%), Gaps = 1/215 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +RQM+++GV  + +V++     G V+  QG   L  FGAE     ++++  LRE+  ++ 
Sbjct: 43  LRQMHFIGVMSLAIVLVSGLFIGMVLGLQGFTILVDFGAEDALGQMVALSLLRELAPVVA 102

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+GSA+ AEIG MK  E++ ++  +G+D +R +++PR+WA  +S+PLLT+  + 
Sbjct: 103 ALLFAGRAGSALTAEIGLMKATEQLTSMEMIGVDPLRRIVAPRLWAGFVSMPLLTVGFSV 162

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHST-ATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             I G  +V  ++  +    ++S   S+ A + +I  G++K+      +  +A+ +G+ +
Sbjct: 163 VGIWGGYLVGVQWLGVFDGSYWSNMQSSVAFVDDILNGMLKSVVFGLVVTWIAVFQGYDL 222

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
              S  + +  T  VV S   V+ +D +     F 
Sbjct: 223 VPTSEGISRATTRTVVYSSLAVLGLDFVLTALMFG 257


>gi|303230190|ref|ZP_07316958.1| putative membrane protein [Veillonella atypica ACS-134-V-Col7a]
 gi|302515116|gb|EFL57090.1| putative membrane protein [Veillonella atypica ACS-134-V-Col7a]
          Length = 253

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 113/214 (52%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +++QM ++GV  +P++ L     G V+  Q    L  +GA+     LM++   RE+G +L
Sbjct: 40  VLQQMAHLGVDSLPIISLTLLFAGGVMTLQITDVLITYGAQGTVGGLMAVAMGRELGPIL 99

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
             V++AGR G+AI AEIG+MK+ E+IDA+R M ++ +  L+ PR+ A +I +P+L     
Sbjct: 100 VGVVLAGRVGAAITAEIGTMKVTEQIDALRVMAVNPIGYLVVPRVVACMIMVPILAFYGV 159

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              I G   V      +  A +       +T+++   GLIK+      I +V   +G   
Sbjct: 160 VIGIAGGYFVATTIKGLAPATYLDSIQMFSTISDFTLGLIKSSVFGAVIALVGCYKGMHT 219

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
            + + ++G   T+ VV SI +V +++   +   F
Sbjct: 220 KMGAEAVGFSTTSSVVTSIILVFVLNYFLSTLLF 253


>gi|226953846|ref|ZP_03824310.1| toluene tolerance efflux ABC transporter membrane protein
           [Acinetobacter sp. ATCC 27244]
 gi|294651661|ref|ZP_06728964.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Acinetobacter
           haemolyticus ATCC 19194]
 gi|226835406|gb|EEH67789.1| toluene tolerance efflux ABC transporter membrane protein
           [Acinetobacter sp. ATCC 27244]
 gi|292822440|gb|EFF81340.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Acinetobacter
           haemolyticus ATCC 19194]
          Length = 258

 Score =  101 bits (252), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 113/209 (54%), Gaps = 1/209 (0%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
           S   KG     I QMY VGV  + ++ +     G V+  QG   L   G+E     ++S+
Sbjct: 31  SMPSKGGFQRFIYQMYRVGVMSLLIISVSGLFIGLVLGLQGYSILVNVGSEAMLGTMVSL 90

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
             LRE+  ++ A++ AGR+GSA+ AEIGSMK +E++ ++  +G+D ++ ++SPR+WA I+
Sbjct: 91  TLLRELAPVVAALLFAGRAGSALTAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIV 150

Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAI 324
           SLP+LT++     I+G  +V   +  +    F+    S+     ++  G+IK+   A   
Sbjct: 151 SLPMLTVIFAAIGIVGGKLVGVDFLGVDEGSFWGGMQSSVQFGHDVVNGIIKSIVFALIC 210

Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
             VA+ +G+A       +   +T  VV S
Sbjct: 211 TWVAVYQGYACDPTPEGIATSMTRTVVYS 239


>gi|223937293|ref|ZP_03629199.1| protein of unknown function DUF140 [bacterium Ellin514]
 gi|223894078|gb|EEF60533.1| protein of unknown function DUF140 [bacterium Ellin514]
          Length = 244

 Score =  101 bits (252), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 111/205 (54%), Gaps = 2/205 (0%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           Q + +G + + +V ++SF  G VIA      L + G       L+ I   +E+  ++ ++
Sbjct: 32  QFFEIGNASLLMVCILSFFIGGVIALLTGPVLVERGLTNSVGGLVGISMAKELAPVMMSI 91

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           +IAGR GS++ AEIGSM++ +EIDA+RTM ++ +  L+ PR+ A+ ++LPLL I +    
Sbjct: 92  LIAGRIGSSMTAEIGSMRVYQEIDALRTMNINPIHYLVLPRLTAIAVALPLLVIFSILVG 151

Query: 279 IIGASIVIWKYYDIP--FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
             G ++V    + I   F  FF+         ++  GL+K+   A  IG+V   +G    
Sbjct: 152 WGGGALVSALNHKIAVSFQAFFTNLREVVDFGDVINGLVKSFIFALVIGVVCCHQGLQTI 211

Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361
                +G+ VT  VV  I +++I+D
Sbjct: 212 GGPRGIGRSVTKAVVNCIVLIVILD 236


>gi|152972118|ref|YP_001337264.1| ABC transporter membrane protein [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|206579237|ref|YP_002236394.1| hypothetical protein KPK_0517 [Klebsiella pneumoniae 342]
 gi|238896701|ref|YP_002921446.1| putative ABC transport system permease component [Klebsiella
           pneumoniae NTUH-K2044]
 gi|288933378|ref|YP_003437437.1| hypothetical protein Kvar_0495 [Klebsiella variicola At-22]
 gi|290511571|ref|ZP_06550940.1| ABC transporter, permease component YrbE [Klebsiella sp. 1_1_55]
 gi|329997630|ref|ZP_08302887.1| toluene tolerance protein Ttg2B [Klebsiella sp. MS 92-3]
 gi|150956967|gb|ABR78997.1| putative transport protein (ABC superfamily, membrane) [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|206568295|gb|ACI10071.1| putative membrane protein [Klebsiella pneumoniae 342]
 gi|238549028|dbj|BAH65379.1| putative ABC transport system permease component [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|288888107|gb|ADC56425.1| protein of unknown function DUF140 [Klebsiella variicola At-22]
 gi|289776564|gb|EFD84563.1| ABC transporter, permease component YrbE [Klebsiella sp. 1_1_55]
 gi|328538940|gb|EGF64994.1| toluene tolerance protein Ttg2B [Klebsiella sp. MS 92-3]
          Length = 260

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 118/218 (54%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y VGV  + ++I+     G V+  QG   L+ + AE     L+++  LRE+G ++
Sbjct: 44  LVRQLYNVGVLSMLIIIVSGLFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ AGR+GSA+ AEIG M+  E++ ++  M +D +R +ISPR WA +ISLPLLTI+  
Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFV 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
              I G ++  V WK  D  F  F++   +      ++   LIK+   A  +  +A+  G
Sbjct: 164 AVGIWGGALVGVSWKGIDGGF--FWTAMQNAVDWRMDLVNCLIKSLVFAITVTWIALFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV +   V+ +D +     F 
Sbjct: 222 YDAIPTSAGISRATTRTVVHASLAVLGLDFVLTALMFG 259


>gi|114798102|ref|YP_759452.1| hypothetical protein HNE_0724 [Hyphomonas neptunium ATCC 15444]
 gi|114738276|gb|ABI76401.1| putative membrane protein [Hyphomonas neptunium ATCC 15444]
          Length = 261

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 116/219 (52%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
            ++RQ+  +G   +PVV L +   GA +A       S++GAE F   ++ +   RE+GV+
Sbjct: 43  EILRQIVRIGFYSLPVVGLAAVFIGAALALNIYEGGSRYGAEQFVPSIVVLGITRELGVV 102

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +T +M+AGR  + I AEIG+M++ E+IDA+ T+     R L +PR  A +I+LP+L  LA
Sbjct: 103 ITGLMLAGRVSAGIAAEIGAMRVTEQIDALETLSASRYRYLYAPRFIAALITLPMLVALA 162

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
           +   ++G  +V     D    V+        TL +IF GLIKA      I I+   +G  
Sbjct: 163 DIIGVMGGWLVSVYGLDFDSTVYLRNTLDFLTLNDIFAGLIKAVVFGGVIAIMGCYQGDR 222

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
               +  +G+  T  +V +  +++  + + +  +  IG+
Sbjct: 223 SQAGATGVGRAATLSMVGAAVLILAFNYVMSTVFVEIGL 261


>gi|119510442|ref|ZP_01629575.1| hypothetical protein N9414_01612 [Nodularia spumigena CCY9414]
 gi|119464864|gb|EAW45768.1| hypothetical protein N9414_01612 [Nodularia spumigena CCY9414]
          Length = 265

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 106/201 (52%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + QM  VG   + + +L +   GAV   Q A +   FGA      ++++   RE+  +LT
Sbjct: 42  VEQMAAVGPGSLFIALLTAVFVGAVFTIQVAREFINFGAANLVGGVLAVALTRELSPVLT 101

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV++AGR GSA  AEIG+M++ E+IDA+  +  D +  L+ PR+ A  + LP+LT+L+  
Sbjct: 102 AVVLAGRVGSAFAAEIGTMRVTEQIDALFILKTDPIDYLVIPRLLACCLMLPILTLLSLI 161

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           + I+G  I+    Y I   VF     +   + +I + LIKA      I ++    G    
Sbjct: 162 TGILGGLIIATSIYGIADTVFLDSARNLVGIWDIISALIKACCFGLLIAVIGCSWGLTTK 221

Query: 337 VHSNSLGKKVTTCVVQSISIV 357
             +  +G+  TT VV S+ I+
Sbjct: 222 GGAKGVGQSTTTAVVTSLLII 242


>gi|303230959|ref|ZP_07317702.1| putative membrane protein [Veillonella atypica ACS-049-V-Sch6]
 gi|302514341|gb|EFL56340.1| putative membrane protein [Veillonella atypica ACS-049-V-Sch6]
          Length = 253

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 113/214 (52%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +++QM ++GV  +P++ L     G V+  Q    L  +GA+     LM++   RE+G +L
Sbjct: 40  VLQQMAHLGVDSLPIISLTLLFAGGVMTLQITDVLITYGAQGTVGGLMAVAMGRELGPIL 99

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
             V++AGR G+AI AEIG+MK+ E+IDA+R M ++ +  L+ PR+ A +I +P+L     
Sbjct: 100 VGVVLAGRVGAAITAEIGTMKVTEQIDALRVMAVNPIGYLVVPRVVACMIMVPILAFYGV 159

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              I G   V      +  A +       +T+++   GLIK+      I +V   +G   
Sbjct: 160 VIGIAGGYFVATAIKGLAPATYLDSIQMFSTISDFTLGLIKSSVFGAVIALVGCYKGMHT 219

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
            + + ++G   T+ VV SI +V +++   +   F
Sbjct: 220 KMGAEAVGFSTTSSVVTSIILVFVLNYFLSTLLF 253


>gi|226227980|ref|YP_002762086.1| putative transporter [Gemmatimonas aurantiaca T-27]
 gi|226091171|dbj|BAH39616.1| putative transporter [Gemmatimonas aurantiaca T-27]
          Length = 264

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 112/210 (53%), Gaps = 2/210 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLL 215
           IRQM  +GV  VP+ ++++   G V A Q  +QL   G ++  + L++   +  E+G LL
Sbjct: 47  IRQMQRIGVESVPLTVIVAAFLGGVTAFQTRYQLFP-GVQLSVVGLIARQSIVLELGPLL 105

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA+++ GR G+ + AEIG+M++ E+IDA+ T+  D V  L +PR  A ++ LP L +LAN
Sbjct: 106 TALVLTGRVGARMTAEIGTMRVTEQIDALETLAFDPVAYLATPRFIAGVVMLPTLVMLAN 165

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
            +AI  A   +    D+  + F        T   +   LIKA     AI  V   EG+  
Sbjct: 166 ATAIFSAWATLVLATDVRTSDFLGGLRLAFTAFQVVYSLIKATCFGAAIAFVCSYEGYVT 225

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
              +  +GK     VV +   ++++D++ A
Sbjct: 226 EAGAEGVGKSTALAVVIASVSILVLDAIVA 255


>gi|158337358|ref|YP_001518533.1| hypothetical protein AM1_4236 [Acaryochloris marina MBIC11017]
 gi|158307599|gb|ABW29216.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
          Length = 249

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 108/205 (52%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I QM  VG   + V +L +   G V   Q A +   FG       ++++   RE+  +LT
Sbjct: 26  IEQMAIVGPESLLVALLTASFVGMVFTIQVAREFIAFGLVQTVGGVLALALTRELAPVLT 85

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV+I GR  SA  AEIG+M++ E+IDA++ +  D V  L+ PR+ A  + LP+LT+++  
Sbjct: 86  AVIITGRVCSAFAAEIGTMRVTEQIDALQMLDTDPVDYLVVPRLLACTLMLPILTLISLV 145

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           + + G  +V    YDIP++VF    HS   + +I+  +IKA      I IV    G    
Sbjct: 146 AGVTGGMVVASVLYDIPYSVFLDSVHSFLGVWDIWNSMIKAAIFGGIIAIVGSSWGLTTY 205

Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361
             +  +G+  T  VV ++ +V + +
Sbjct: 206 GGAKGVGQSTTAAVVTALVMVFMTN 230


>gi|83593780|ref|YP_427532.1| hypothetical protein Rru_A2445 [Rhodospirillum rubrum ATCC 11170]
 gi|83576694|gb|ABC23245.1| Protein of unknown function DUF140 [Rhodospirillum rubrum ATCC
           11170]
          Length = 389

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 114/214 (53%)

Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219
           M   G + + +V +++ + GA++A  GA QL +FGA IF  DL+ I  +RE+  ++TA++
Sbjct: 176 MREAGANALVIVAIVNGLIGAILAFVGAVQLQRFGAGIFVADLVGIAMVREMAAVMTAIV 235

Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279
           +AGR+G A  A + +M+ NEEIDA++ +G+     L+ PR+ AL+  +PLL +      +
Sbjct: 236 MAGRTGGAYAAHLATMQGNEEIDALKVLGIPAYDFLVLPRVVALVTMMPLLYLYGCAIGL 295

Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339
           +G  +V     D+    F  +            GL+K+      + +     G   G  +
Sbjct: 296 LGGFVVSLAILDMSATTFLDQIQGAIAGRQFAIGLVKSVAFGFLVALAGCHIGLRAGRSA 355

Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
             +G+  T+ VV  I  VI +D++FA+    +GI
Sbjct: 356 ADVGRAATSAVVVGIVGVIALDAVFAVCADRLGI 389


>gi|312898371|ref|ZP_07757761.1| conserved hypothetical protein [Megasphaera micronuciformis F0359]
 gi|310620290|gb|EFQ03860.1| conserved hypothetical protein [Megasphaera micronuciformis F0359]
          Length = 264

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 111/222 (50%), Gaps = 18/222 (8%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I QM ++GV   P+V L     G V+  Q    L ++GA+     +MS+   RE+G +LT
Sbjct: 52  INQMAHLGVDSFPIVALTMLFAGMVMTLQIVDILMRYGAQSTLGGIMSVAMGRELGPILT 111

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
            V++AGR G+A+ AEIG+MK+ E+IDA+R M  D V  L+ PR  A +  +PLLT     
Sbjct: 112 GVVVAGRVGAAMTAEIGTMKVTEQIDALRCMATDPVAYLVVPRFVACVFMVPLLTFFGYL 171

Query: 277 SAIIGASIVIWKYYDIPFAVF------FSRFHST---ATLANIFTGLIKAPFMACAIGIV 327
               G   V         AVF      ++  HS      ++++  GLIKA      I +V
Sbjct: 172 IGTGGGYCV---------AVFSAGLTDYTYMHSIEFFTEISDVLFGLIKAGVFGGIIALV 222

Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           A  EG      +  +G+  T  VV SI  + I + + ++  +
Sbjct: 223 ACFEGMHAKSGAEGVGQATTKSVVTSIIFIFITNYILSVILY 264


>gi|224588219|gb|ACN58843.1| ABC transporter permease protein [uncultured bacterium BLR12]
          Length = 264

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 123/255 (48%), Gaps = 7/255 (2%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
           N+     YH+ K +  F  +    A  L  ++    +     Y+F      ++RQ Y +G
Sbjct: 4   NTASKEKYHLSKSVDSFFINV---AQTLRFILDYFVQLFRPPYEFS----EIVRQCYKIG 56

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
              +P++ L  F+ G V  +Q    LS+FGA  +   L+ I   + +  L+TA++ AG+ 
Sbjct: 57  CDSLPLISLTGFIIGVVFTKQSRPSLSEFGATSWLPSLIGIAVFKALAPLVTALICAGKV 116

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           GS+I AE+G+MK+ E+I+A+        + L+  R+ A +  LP+L +  +  +++G+ +
Sbjct: 117 GSSIGAELGAMKVTEQIEAMDVSASKPYKYLVFTRVTACLFMLPILMLFTSLVSLMGSYL 176

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
            I     I  A F +         ++   LIKA      IG+VA  +GF     +  +GK
Sbjct: 177 DISSNEHISLATFITNAFDKINFLDLKASLIKALVFGFTIGMVACYKGFNTIRGTEGVGK 236

Query: 345 KVTTCVVQSISIVII 359
                VV S+ ++ I
Sbjct: 237 AANAAVVTSMYLIFI 251


>gi|193215869|ref|YP_001997068.1| hypothetical protein Ctha_2170 [Chloroherpeton thalassium ATCC
           35110]
 gi|193089346|gb|ACF14621.1| protein of unknown function DUF140 [Chloroherpeton thalassium ATCC
           35110]
          Length = 264

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 119/204 (58%), Gaps = 2/204 (0%)

Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG-AEIFSIDLMSILQLREIG 212
           L L+RQ+ + G   + +V+LIS   G +I  +G   L+ FG +++  + L+S++  RE+ 
Sbjct: 48  LVLLRQVLFTGYEALSIVVLISVSIGGLIILEGYSILANFGQSDLLYVILVSVIT-RELS 106

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            LLTA +I  RSG+AI  E+G+M +N EIDA+ ++G+  +  L+ PR   +++SL +L +
Sbjct: 107 NLLTAFIIVARSGTAIATELGNMVVNHEIDALLSIGISPISYLVVPRTIGVVVSLLVLNV 166

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
             N + I+G  +V   +Y I F VFFS+  +  TL +I   ++K+     AI I++   G
Sbjct: 167 YFNITGILGGWMVSNWFYPIDFNVFFSKLLAKLTLVDISASILKSMLFGFAIAIISSFHG 226

Query: 333 FAVGVHSNSLGKKVTTCVVQSISI 356
             V   S  + ++    VV S+++
Sbjct: 227 LQVNFASTEVPQRTIRAVVYSLTM 250


>gi|218248789|ref|YP_002374160.1| hypothetical protein PCC8801_4068 [Cyanothece sp. PCC 8801]
 gi|257061848|ref|YP_003139736.1| hypothetical protein Cyan8802_4107 [Cyanothece sp. PCC 8802]
 gi|218169267|gb|ACK68004.1| protein of unknown function DUF140 [Cyanothece sp. PCC 8801]
 gi|256592014|gb|ACV02901.1| protein of unknown function DUF140 [Cyanothece sp. PCC 8802]
          Length = 263

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 108/213 (50%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + QM  VG   + + ++ +   G V   Q A +   FGA      +++I   RE+  +LT
Sbjct: 43  LEQMSVVGPESLTIALVTAGFVGMVFTIQVAREFIHFGAASTVGGVLAIALTRELSPVLT 102

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV++AGR GSA  AEIG+M++ E+IDA+  +  D +  L+ PR+ A  + LP+L ILA  
Sbjct: 103 AVVVAGRVGSAFAAEIGTMRVTEQIDALYVLKTDPIDYLVVPRVLACCMMLPVLNILALM 162

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           + + G  ++    YDI   +F     +   L +I T LIK+      I ++    G    
Sbjct: 163 TGMAGGLLIADSLYDISPDLFLKSARNFLELWDIVTSLIKSAVFGGLIAVIGCSWGLTTT 222

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
             +  +G+  TT VV S+  V I +   + F F
Sbjct: 223 GGAKGVGQSTTTAVVTSLLAVFIANFFLSWFMF 255


>gi|325983137|ref|YP_004295539.1| hypothetical protein NAL212_2576 [Nitrosomonas sp. AL212]
 gi|325532656|gb|ADZ27377.1| protein of unknown function DUF140 [Nitrosomonas sp. AL212]
          Length = 265

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 116/215 (53%), Gaps = 1/215 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +IR++Y+ GV  + ++++     G V+  QG   L ++G+E     L+++  +RE+G ++
Sbjct: 47  VIRELYFTGVLSLIIIVVSGLFVGMVLGLQGYETLQKYGSESAVGTLVALSLVRELGPVV 106

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ A R+GSAI AEIG MK  E++ A+  M +D +  +++PR WA +IS+P L  + +
Sbjct: 107 AALLFASRAGSAITAEIGLMKATEQLAAMGMMAVDPIARVVAPRFWAGVISMPFLAAMFS 166

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              + G  +V   +  +    ++S+  S      +I  G IK+ F   A+  +A+ EG+ 
Sbjct: 167 VMGVFGGYLVTVIFIGVDEGSYWSQMQSAVDFRFDILNGFIKSCFFGVAVTAIAVFEGYD 226

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               +  +    T  VV S  +++ +D +   F F
Sbjct: 227 APPTAEGVSGATTRTVVTSSLVILGLDFILTAFMF 261


>gi|91774594|ref|YP_544350.1| hypothetical protein Mfla_0238 [Methylobacillus flagellatus KT]
 gi|91708581|gb|ABE48509.1| protein of unknown function DUF140 [Methylobacillus flagellatus KT]
          Length = 263

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 137/259 (52%), Gaps = 8/259 (3%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
           +++  N+   IG +++  +    +       V+  +GE       F+   L+ IR++Y+ 
Sbjct: 2   FSAVANMLRGIGHRVIDRLWRFGAGIRFFFYVLIYSGE------SFRRLHLT-IREIYFT 54

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           GV  + ++++ +F  G V+A QG   L ++G+      L+++  +RE+G ++TA++ AGR
Sbjct: 55  GVLSLIIILVSAFFVGMVLALQGYNTLQRYGSSEAIGVLVALSLVRELGPVVTALLFAGR 114

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           +G+AI AEIG M+  E++ A+  M +  +  +++PR WA + S+PLL  L +   ++G  
Sbjct: 115 AGTAITAEIGLMRATEQLSAMEMMAVSPIARVVAPRFWAGLFSMPLLAALFSMVGVLGGY 174

Query: 284 IVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
           +V      +    F+S+  ++     +I  G+IK+     A  ++A+ EGF     +  +
Sbjct: 175 LVAVPLIGVDAGAFWSQMQASVDFREDIVNGVIKSLVFGIACTMIALFEGFDAPPTAEGV 234

Query: 343 GKKVTTCVVQSISIVIIID 361
            +  T  VV S   V+ +D
Sbjct: 235 SRATTRTVVNSSLAVLGLD 253


>gi|227538358|ref|ZP_03968407.1| ABC superfamily ATP binding cassette transporter permease protein
           [Sphingobacterium spiritivorum ATCC 33300]
 gi|300774198|ref|ZP_07084065.1| ABC superfamily ATP binding cassette transporter permease protein
           [Sphingobacterium spiritivorum ATCC 33861]
 gi|227241873|gb|EEI91888.1| ABC superfamily ATP binding cassette transporter permease protein
           [Sphingobacterium spiritivorum ATCC 33300]
 gi|300758877|gb|EFK55706.1| ABC superfamily ATP binding cassette transporter permease protein
           [Sphingobacterium spiritivorum ATCC 33861]
          Length = 252

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 107/208 (51%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +IRQ Y +G   +P++ +  F+ G V  +Q    L +FGA  +   L+SI  +R +  L+
Sbjct: 36  IIRQCYEIGWRSLPLISVTGFIVGFVFTKQSRPSLEEFGATSWLPSLISIAIIRALAPLV 95

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ +G+ GS I AE+ SM + E+IDA+   G +  + LI  R+WA  I +P+L     
Sbjct: 96  TALIASGKVGSQIGAELSSMNVTEQIDAMEVSGTNPFKFLIVSRVWATTIGIPILCFYTA 155

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              ++G  + I    D+ F  FF++        +IF  + +A      IG V+   G+  
Sbjct: 156 GIGLLGGYLSIASKDDVSFLSFFTQVFEAIAYKDIFAMVFRAVVFGFTIGAVSSYCGYFS 215

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              +  +GK   + VV S+ IV I + L
Sbjct: 216 SKGTEGVGKAANSAVVASMFIVFIEEIL 243


>gi|189218795|ref|YP_001939436.1| organic solvents resistance ABC-type transport system permease
           component [Methylacidiphilum infernorum V4]
 gi|189185653|gb|ACD82838.1| organic solvents resistance ABC-type transport system permease
           component [Methylacidiphilum infernorum V4]
          Length = 258

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 130/253 (51%), Gaps = 8/253 (3%)

Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171
           Y +G   +KF+    +   I  L++     F +   +++ FL+    Q+  +G     +V
Sbjct: 3   YRVGSLFIKFLK---ATGEIFFLLLDTLYSFFSFPLRWRLFLM----QILTIGAKSQIIV 55

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
           ++    TGAV A Q  F   + G    +  ++++  LRE+G +L A+M++GR GSA+ AE
Sbjct: 56  LVTGAFTGAVFAAQVQFHFGKLGMSSATGPVVTLAMLRELGPVLCALMVSGRVGSAMAAE 115

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           I +MK+ E+IDA+R++G+   + LI PR   L++S+PLL  + +   I+   +V      
Sbjct: 116 ISTMKVTEQIDALRSLGVYVTQYLIVPRFLGLVVSMPLLVAITSGVGILCGYLVSVPLLG 175

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
           +  A ++       +L +++ G +K  F    I +++   G    + +  +G   T  +V
Sbjct: 176 VEPAYYWENTIRFTSLDDVWMGELKGMFFGGLIVLISCYRGLNCQLSAEGVGIAATQAMV 235

Query: 352 QSISIVIIIDSLF 364
            S SI I+I + F
Sbjct: 236 YS-SIAILISNFF 247


>gi|290968738|ref|ZP_06560276.1| putative membrane protein [Megasphaera genomosp. type_1 str. 28L]
 gi|290781391|gb|EFD93981.1| putative membrane protein [Megasphaera genomosp. type_1 str. 28L]
          Length = 253

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 117/220 (53%), Gaps = 14/220 (6%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I QM  +GV  +P+V L     G V+  Q    L ++GA+      MS+   RE+G +LT
Sbjct: 41  IYQMAKLGVDSLPIVSLTLLFAGMVMTLQIVDILLRYGAQSTLGGAMSVSMGRELGPILT 100

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
            V++AGR G+A+ AEIG+MK+ E+IDA+R + ++ +  L+ PR  A ++ +PL   LA +
Sbjct: 101 GVVMAGRVGAAMTAEIGTMKVTEQIDALRCLAVNPIAYLVVPRFVACVLMVPL---LAFY 157

Query: 277 SAIIGA----SIVIWKYYDIPFAVFFSRFHSTATL---ANIFTGLIKAPFMACAIGIVAM 329
             +IG     ++ +W          F+  +S A L    +I  GLIKA F    I ++A 
Sbjct: 158 GYVIGTAGGYAVAVWG----AGLAHFTYVNSIAVLTAVGDIVYGLIKAMFFGGIIAVIAC 213

Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
            EGF     +  +G+  T  VV SI  + I + + ++  +
Sbjct: 214 YEGFHAESGAEGVGRATTKSVVTSIVFIFICNYILSVILY 253


>gi|24214757|ref|NP_712238.1| ABC transporter membrane protein [Leptospira interrogans serovar
           Lai str. 56601]
 gi|45657720|ref|YP_001806.1| ABC transporter permease protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|24195758|gb|AAN49256.1| membrane protein of an ABC transporter complex [Leptospira
           interrogans serovar Lai str. 56601]
 gi|45600960|gb|AAS70443.1| ABC transporter permease protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 259

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 113/218 (51%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           ++ QMY  GV  + VV +++  TG +++      L  FGAE     LM+I   RE+   +
Sbjct: 40  ILDQMYITGVGSISVVSIVAVFTGMIMSLNTGLGLKDFGAEGQIGLLMTITLTREMSPFM 99

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA+++A   GSA+ AEIG+MK++EE+DA+  M +D VR LI PRI    + +P+L + + 
Sbjct: 100 TALILAASIGSAMAAEIGTMKVSEEVDALEVMSIDPVRYLIFPRILGFSVMVPVLCVYST 159

Query: 276 FSAIIGASIVIWKYYDIPFAVF----FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
              I+G +IV +    I +  +    F R  S   L +++ G++K       +  ++   
Sbjct: 160 ALGILGGAIVGYFQLGIDYFTYFRDVFDRIASIPGLKDLYVGILKGFIFGIIVSAISCSH 219

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF-AIFY 368
           G      +  +G+     VV S  +VI    +  A+FY
Sbjct: 220 GLRTSGGAIGVGRATRESVVASFLMVIFTGYMITALFY 257


>gi|162448883|ref|YP_001611250.1| putative ABC transporter permease protein [Sorangium cellulosum 'So
           ce 56']
 gi|161159465|emb|CAN90770.1| putative ABC transporter permease protein [Sorangium cellulosum 'So
           ce 56']
          Length = 287

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 105/205 (51%), Gaps = 1/205 (0%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           S + QM  +GV    +  + +   G V+A Q A  L +FG   ++  ++ +   RE+   
Sbjct: 67  STLYQMEALGVRSAAIASVTALFVGMVMAVQFAIGLQKFGGMEYTGRIIGLSFSRELAPT 126

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           LTAV++ GR G+ I AE+GSM + E+IDAIR +G   ++ L+ PR+ A I+ +P+L   A
Sbjct: 127 LTAVIVGGRIGAGIAAEVGSMAVTEQIDAIRALGASPLKKLVLPRLLASIVVMPVLGAFA 186

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
                 GA +V    + IP   F      + T  + F+G+ K PF    I +V    G  
Sbjct: 187 LVLGFGGAMLVCATEFGIPAGFFLRTALGSVTFMDYFSGMYKTPFFGAIIALVGCHFGLI 246

Query: 335 VGVHSNSLGKKVT-TCVVQSISIVI 358
               +  +G   T T VV SI+I+I
Sbjct: 247 TRGGTEGVGHATTRTVVVTSITILI 271


>gi|160872193|ref|ZP_02062325.1| toluene tolerance protein Ttg2B [Rickettsiella grylli]
 gi|159120992|gb|EDP46330.1| toluene tolerance protein Ttg2B [Rickettsiella grylli]
          Length = 262

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 117/215 (54%), Gaps = 1/215 (0%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           +F+     LI Q+Y++GV  + ++++     G V+  QG   L++FGA      L+++  
Sbjct: 37  RFRKSFPLLIEQLYFIGVLSLIIMVISGLFIGMVVGLQGYNTLNKFGASQQLGQLVALSV 96

Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267
           +RE+G ++TA++ AGR+GSA+ AEIG MK  E++ ++  MG+D +  +ISPR W   IS+
Sbjct: 97  VRELGPVITALLFAGRAGSALTAEIGLMKSTEQLASMEMMGIDPLWRVISPRFWGGFISM 156

Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGI 326
           P L I+ +  AI G  +V   +  +    F+S   S      +I  G+IK+      +  
Sbjct: 157 PFLMIIFSTVAIWGGYLVGVVWLGVDGGTFWSAMQSAVNFHDDIINGIIKSIVFGGVVTW 216

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           +A+ +G+        +G+  T  VV S   ++ +D
Sbjct: 217 IAVFQGYDTIPTPQGVGRATTHTVVYSSLAILGLD 251


>gi|193215278|ref|YP_001996477.1| hypothetical protein Ctha_1571 [Chloroherpeton thalassium ATCC
           35110]
 gi|193088755|gb|ACF14030.1| protein of unknown function DUF140 [Chloroherpeton thalassium ATCC
           35110]
          Length = 265

 Score =  100 bits (249), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 118/213 (55%), Gaps = 2/213 (0%)

Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209
           K +   ++ Q Y  G   +P+V++ S   G+++  +   QL +FGA++ +    ++  +R
Sbjct: 41  KKYWRDILNQAYISGTESIPIVLVSSISIGSLLTMEVGNQLEEFGAKLMTGRTTALSVIR 100

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLP 268
           E+G +LT +M++ R G+   +E+G+MKI+E+IDA+R  G D +  L+ PR+ A L++ LP
Sbjct: 101 ELGPMLTGLMLSARVGARNGSELGAMKISEQIDALRAFGTDPIAKLVMPRLIASLLMFLP 160

Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328
            LT L++F+ +   +++   Y+ I    +++   +   + +   G +K P  A  I +V+
Sbjct: 161 -LTALSDFAGLTSGALIAEHYHHIDPGFYWNSVLNLLIVKDFVVGFLKPPVFAVIITLVS 219

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
              GF     +  +G+     +V S  +V+I +
Sbjct: 220 CFNGFDATGGTAGVGRSTIKGIVVSSGLVLIAN 252


>gi|225850834|ref|YP_002731068.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Persephonella marina
           EX-H1]
 gi|225645536|gb|ACO03722.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Persephonella marina
           EX-H1]
          Length = 248

 Score =  100 bits (249), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 104/194 (53%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +++ M  +GV+  P++ +  F TG V+  +      +F AE     L+S+   RE+  +L
Sbjct: 35  ILKYMEEIGVTAAPLIAITGFFTGGVLVVETYPTFHKFNAEFLIGALVSLSLSRELSPVL 94

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A+++  RSGSA+ A IG+MKI E+IDA++ M ++ VR LI+PR+ A ++ +P L IL+ 
Sbjct: 95  VALLVTARSGSAMAANIGTMKITEQIDALKVMAVNPVRYLIAPRLIASLLMVPALVILSY 154

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              ++G   V    Y I   +F  +      L +I  GL K+   A  I IV+   G+  
Sbjct: 155 TFGLLGGYFVGVNLYGINPYLFVEKMKDFTELYDILGGLYKSMGFATIITIVSCYFGYVT 214

Query: 336 GVHSNSLGKKVTTC 349
              +  +G+  TT 
Sbjct: 215 KGGAEGVGRSTTTA 228


>gi|220905696|ref|YP_002481007.1| hypothetical protein Cyan7425_0250 [Cyanothece sp. PCC 7425]
 gi|219862307|gb|ACL42646.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7425]
          Length = 248

 Score =  100 bits (249), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 108/205 (52%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + QM  VG   + V ++ +   G V   Q A +   FGA      +++I   RE+  +LT
Sbjct: 26  LEQMSVVGPESLLVALITATFVGMVFTIQVAREFINFGAVSAVGGVLAIALTRELAPVLT 85

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV++AGR GSA  AEIG+M++ E+IDA+  +  D V  L+ PR  A  + LP+LT+LA  
Sbjct: 86  AVILAGRVGSAFAAEIGTMRVTEQIDALYLLSTDPVDYLVLPRFLACCLMLPVLTLLALV 145

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           +A+ G  ++    Y IPF++F     S   L +I++ ++K+      + I+    G    
Sbjct: 146 TAMGGGMLLAESLYGIPFSLFLDSAKSFLELWDIWSAVLKSIVFGALVAIIGCNWGLTTS 205

Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361
             +  +G+  T  VV S+  + I D
Sbjct: 206 GGAKGVGQSTTAAVVISLLSIFIAD 230


>gi|59802415|ref|YP_209127.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae FA
           1090]
 gi|194100076|ref|YP_002003216.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae NCCP11945]
 gi|239998068|ref|ZP_04717992.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae 35/02]
 gi|240079831|ref|ZP_04724374.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae FA19]
 gi|240112039|ref|ZP_04726529.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae MS11]
 gi|240116987|ref|ZP_04731049.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae PID1]
 gi|240122625|ref|ZP_04735581.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae PID332]
 gi|240127329|ref|ZP_04739990.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae SK-93-1035]
 gi|268593920|ref|ZP_06128087.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae
           35/02]
 gi|268595976|ref|ZP_06130143.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae FA19]
 gi|268598097|ref|ZP_06132264.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae MS11]
 gi|268602671|ref|ZP_06136838.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID1]
 gi|268681221|ref|ZP_06148083.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID332]
 gi|268685698|ref|ZP_06152560.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae
           SK-93-1035]
 gi|59719310|gb|AAW90715.1| putative abc transport protein, inner membrane protein [Neisseria
           gonorrhoeae FA 1090]
 gi|193935366|gb|ACF31190.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae NCCP11945]
 gi|268547309|gb|EEZ42727.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae
           35/02]
 gi|268549764|gb|EEZ44783.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae FA19]
 gi|268582228|gb|EEZ46904.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae MS11]
 gi|268586802|gb|EEZ51478.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID1]
 gi|268621505|gb|EEZ53905.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID332]
 gi|268625982|gb|EEZ58382.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae
           SK-93-1035]
          Length = 258

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 118/215 (54%), Gaps = 3/215 (1%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215
           +RQ+Y+ GV  V +V +     G V+  QG  QLS+F  A+I    + + L LRE+G +L
Sbjct: 43  VRQVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASL-LRELGPVL 101

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ A  +G A+ +EIG MK   +++A+  M ++ V  +++PR WA + S+PLL  + N
Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTGQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFN 161

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
            + I GA +V   +  +   +F+ +  +  T+  ++  GLIK+     A+ ++A+ +GF 
Sbjct: 162 VAGIFGAYLVGVSWLGLDSGIFWPQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFH 221

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               S  + +  T  VV S   ++ +D +   + F
Sbjct: 222 CIPTSEGILRASTRTVVSSALTILAVDFILTAWMF 256


>gi|328951866|ref|YP_004369200.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM
           11109]
 gi|328452190|gb|AEB08019.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM
           11109]
          Length = 274

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 111/211 (52%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           RQ+Y +G  G P+V L   + G  I    + QL++ G E F  +L+ I+ +RE+G +LTA
Sbjct: 62  RQIYLIGGRGWPIVALTGMLLGLAIIVYASAQLAKIGGEQFVGNLLVIIVIRELGPVLTA 121

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +++  RSG+A++ EIG M +  EI+A+  MGL+   ++  PR W L+ISL  L  +    
Sbjct: 122 LLVLLRSGAAMIVEIGGMVLEREIEALELMGLEPEIVIGGPRFWGLVISLITLYFIFVVC 181

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           A+ G  +    + D+ + VF+  F +     ++     K       IG+VA+  G     
Sbjct: 182 AVWGGFLFSQIFADMYWGVFWLSFVNALGWPDLVLNFAKVVLFGMFIGVVAIYHGLQTAD 241

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           H  S+  + +   V S+  + +I++  ++ Y
Sbjct: 242 HWESIVAQTSRGAVISLLFLGLINTALSVLY 272


>gi|240013249|ref|ZP_04720162.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae DGI18]
 gi|240015696|ref|ZP_04722236.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae FA6140]
 gi|240114786|ref|ZP_04728848.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae PID18]
 gi|240120321|ref|ZP_04733283.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae PID24-1]
 gi|240124812|ref|ZP_04737698.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae SK-92-679]
 gi|254492848|ref|ZP_05106019.1| ABC transporter inner membrane subunit [Neisseria gonorrhoeae 1291]
 gi|260441401|ref|ZP_05795217.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae DGI2]
 gi|268600440|ref|ZP_06134607.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID18]
 gi|268683391|ref|ZP_06150253.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae
           SK-92-679]
 gi|291044759|ref|ZP_06570468.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae DGI2]
 gi|293397855|ref|ZP_06642061.1| ABC transport system permease [Neisseria gonorrhoeae F62]
 gi|226511888|gb|EEH61233.1| ABC transporter inner membrane subunit [Neisseria gonorrhoeae 1291]
 gi|268584571|gb|EEZ49247.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID18]
 gi|268623675|gb|EEZ56075.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae
           SK-92-679]
 gi|291011653|gb|EFE03649.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae DGI2]
 gi|291611801|gb|EFF40870.1| ABC transport system permease [Neisseria gonorrhoeae F62]
 gi|317165512|gb|ADV09053.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 258

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 118/215 (54%), Gaps = 3/215 (1%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215
           +RQ+Y+ GV  V +V +     G V+  QG  QLS+F  A+I    + + L LRE+G +L
Sbjct: 43  VRQVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASL-LRELGPVL 101

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ A  +G A+ +EIG MK   +++A+  M ++ V  +++PR WA + S+PLL  + N
Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTGQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFN 161

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
            + I GA +V   +  +   +F+ +  +  T+  ++  GLIK+     A+ ++A+ +GF 
Sbjct: 162 VAGIFGAYLVGVSWLGLDSGIFWPQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFH 221

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               S  + +  T  VV S   ++ +D +   + F
Sbjct: 222 CIPTSEGILRASTRTVVSSALTILAVDFILTAWMF 256


>gi|42524770|ref|NP_970150.1| ABC transporter, permease protein [Bdellovibrio bacteriovorus
           HD100]
 gi|39576980|emb|CAE78209.1| ABC transporter, permease protein [Bdellovibrio bacteriovorus
           HD100]
          Length = 262

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 107/190 (56%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
            Q+Y +G+  +P++++ +   G V++ Q    L +FG +++   L+++  LRE+G + T+
Sbjct: 45  EQIYQIGMRSLPLIVITAVSIGMVMSLQFGMGLEKFGGKLYVPKLLAVTILREMGPVFTS 104

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +M+A R G+ I +EIGSM + ++IDAIR +G   ++ ++ PR+ A +I+LP+L  +AN  
Sbjct: 105 LMLAARVGAGIASEIGSMVVTQQIDAIRALGTSPIKKIVIPRVLACLITLPILVSIANIV 164

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
             +G  I+     ++    ++ +  +T+ + +  +G  K  F A  I I +   G  V  
Sbjct: 165 GNLGGLIIGATELNLDPNFYYLKVMTTSNIQDYLSGFAKTFFFAIFIAIPSCYFGLNVKA 224

Query: 338 HSNSLGKKVT 347
            +  +G   T
Sbjct: 225 GTKEVGIATT 234


>gi|326405357|ref|YP_004285439.1| putative ABC transporter permease [Acidiphilium multivorum AIU301]
 gi|325052219|dbj|BAJ82557.1| putative ABC transporter permease protein [Acidiphilium multivorum
           AIU301]
          Length = 260

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 115/217 (52%), Gaps = 8/217 (3%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           R +  +G S +PVV L +  TG V+A Q     S+F +      ++ +   RE+G +L  
Sbjct: 48  RALMEIGYSSLPVVALTAVFTGMVLALQSYIGFSRFDSSSVIASVVVLSLTRELGPVLAG 107

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +M+AGR+GSAI AE+G+M++ ++IDA+ T+  D +R L++PR+ A +I+LPLL ++A+  
Sbjct: 108 LMVAGRAGSAIAAEMGTMRVTDQIDALTTLATDPMRYLVTPRLLAGVIALPLLVVIADIL 167

Query: 278 AIIGASIVIWKYYDIPFAVFF----SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
            + G  +V           +     +  HS     ++ +GL+KA      I ++    G+
Sbjct: 168 GVAGGFLVSTVRLGFEPNAYLRDTVNYLHSN----DVVSGLVKAAVFGFVIALMGCFHGY 223

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                +  +G   T  VV +  +++ +D L    +F+
Sbjct: 224 RSRGGAQGVGGATTAAVVSASVLILALDYLMTQAFFS 260


>gi|116747921|ref|YP_844608.1| hypothetical protein Sfum_0473 [Syntrophobacter fumaroxidans MPOB]
 gi|116696985|gb|ABK16173.1| protein of unknown function DUF140 [Syntrophobacter fumaroxidans
           MPOB]
          Length = 258

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 124/225 (55%), Gaps = 6/225 (2%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G   A   +  G  LS+++Q+ ++G     V+   +  TG V+A QG + L+  G+E + 
Sbjct: 24  GRMLAGITRPPGKFLSVVKQIQFIGTKSFLVIGFTAIFTGMVLALQGYYALASVGSEGWL 83

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
              +S+  +RE+G +LTA+M+ GR+GSA+ AEIG M+I+E+IDAI  M +D    LI+PR
Sbjct: 84  GKAVSLSLIRELGPVLTALMVTGRAGSAMCAEIGIMRIDEQIDAIECMAIDPHSYLITPR 143

Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319
           + A +I+LPLLT   +   I+G  +V      +    +     S+    +++ G++K+  
Sbjct: 144 LLAALIALPLLTAFCDVVGIVGGYLVGVNLLGVNAGAYLDSMESSVVWKDVYMGIVKSIC 203

Query: 320 MACAIGIVAMKEGFAVGVHSNSLGK----KVTT--CVVQSISIVI 358
               I  +   +G+  GV  N+ G     + TT   V+ SISI++
Sbjct: 204 FGVLIIWICTYKGYYAGVDENNFGPEQVSRATTNAVVLSSISILV 248


>gi|85713028|ref|ZP_01044065.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Idiomarina baltica OS145]
 gi|85693131|gb|EAQ31092.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Idiomarina baltica OS145]
          Length = 258

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 117/215 (54%), Gaps = 1/215 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           ++QMY VGV  + ++++     G V+  QG   L  +GAE     ++++  LRE+G ++T
Sbjct: 43  VQQMYVVGVLSLIIIVVSGLFIGMVLGLQGYTILVDYGAEQSLGPMVALSLLRELGPVVT 102

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +++PR WA  +S+PLL ++ + 
Sbjct: 103 ALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVVAPRFWAGFVSMPLLALIFSA 162

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAV 335
             I G  +V   +  +    F+S   S      ++  G+IK+   A  +  +A+ +G+  
Sbjct: 163 VGIYGGYLVGSGWLGVDEGAFWSVMQSAVDWRDDLMNGIIKSLVFAFVVTWIALYKGYRC 222

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
              S  + K  T+ VV +   ++ +D +     F 
Sbjct: 223 EPTSAGISKATTSTVVTASLAILGLDFILTALMFG 257


>gi|304437504|ref|ZP_07397462.1| ABC superfamily ATP binding cassette transporter permease protein
           [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304369554|gb|EFM23221.1| ABC superfamily ATP binding cassette transporter permease protein
           [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 255

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 111/215 (51%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           S++ QM ++G   + +V L    TG V+  Q A +  ++GA+     +++I   RE+G +
Sbjct: 41  SIVYQMAHLGADSLLIVGLTLLFTGIVLTLQIAHEFIRYGAQSTIGAVIAIGIGRELGPV 100

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           L  V+ AGR G+AI AE+ +MK+ E+IDA+R M +  V  LI PR+ A ++ +P+LT+  
Sbjct: 101 LVGVVCAGRVGAAITAEVSTMKVTEQIDALRVMAVSPVNYLIVPRMLACMVVVPILTVFG 160

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
           +   ++G       Y  I    F       A L ++  GLIKA F    I ++    G  
Sbjct: 161 DVIGVLGGYFTAVYYSGISGYTFLHSITQYALLYDMTGGLIKAIFFGNVIAVLGCYYGLH 220

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               +  +G      VV SI ++ I++++   F F
Sbjct: 221 APSGAEGVGTATMQTVVTSIIVIFILNAVLTFFLF 255


>gi|39995923|ref|NP_951874.1| hypothetical protein GSU0817 [Geobacter sulfurreducens PCA]
 gi|39982687|gb|AAR34147.1| conserved hypothetical protein [Geobacter sulfurreducens PCA]
 gi|298504937|gb|ADI83660.1| transporter membrane protein of unknown function DUF140 [Geobacter
           sulfurreducens KN400]
          Length = 257

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 119/204 (58%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q++++G   + V++L +  TG V+  QG + L++FG+E      +++  +RE+G +L+A
Sbjct: 46  KQIHFIGAKSLFVIVLTAAFTGMVLGLQGYYTLAKFGSEGMLGSAVALSLIRELGPVLSA 105

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +M+ GR+GSAI AEIG  KI E+IDA++TM L+  + L+SP+I A +I+LPLL  + +  
Sbjct: 106 LMVVGRAGSAITAEIGIKKITEQIDALKTMALEPFKYLVSPKILAALIALPLLCAIFDVV 165

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            I G  +V  K   +    +FS    +    ++++G++K+      I  V   +G+    
Sbjct: 166 GIYGGYVVGVKLLGVNPGAYFSEMERSVEWKDVWSGIVKSFSFGGIIAWVCCYKGYHASH 225

Query: 338 HSNSLGKKVTTCVVQSISIVIIID 361
            +  + +  T  VV S  +V+I D
Sbjct: 226 GAEGVSRATTEAVVMSSVLVLIWD 249


>gi|154253915|ref|YP_001414739.1| hypothetical protein Plav_3483 [Parvibaculum lavamentivorans DS-1]
 gi|154157865|gb|ABS65082.1| protein of unknown function DUF140 [Parvibaculum lavamentivorans
           DS-1]
          Length = 257

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 111/202 (54%), Gaps = 1/202 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +QM  +G   +PVV L +F TG  +A Q  +  + F +E     ++++   RE+G +L  
Sbjct: 44  QQMLRIGYFSLPVVALTAFFTGGALALQIYYGGNSFNSESIVATIVALGITRELGPVLGG 103

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +M+AGR  +AI AE+G+M++ E+IDA+ T+  +  + L+ PR+ A +I+LPLL ++A+  
Sbjct: 104 LMVAGRVSAAIAAELGTMRVTEQIDALTTLSTNPHKYLVVPRVVAAVITLPLLVLVADII 163

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            I+G  +V     D    V+         L ++ +GLIKA      I ++    GF    
Sbjct: 164 GIMGGYVVGTASLDFNGGVYIKNTADFLKLDDVTSGLIKAAVFGFIIAVMGCFHGFNSKG 223

Query: 338 HSNSLGKKVTTCVVQSISIVII 359
            +  +G+  T  VV + SI+I+
Sbjct: 224 GAQGVGRATTNAVVTA-SILIL 244


>gi|238928172|ref|ZP_04659932.1| ABC superfamily ATP binding cassette transporter permease protein
           [Selenomonas flueggei ATCC 43531]
 gi|238884132|gb|EEQ47770.1| ABC superfamily ATP binding cassette transporter permease protein
           [Selenomonas flueggei ATCC 43531]
          Length = 255

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 111/215 (51%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           S+I QM ++G   + +V L    TG V+  Q A +  ++GA+     +++I   RE+G +
Sbjct: 41  SIIYQMAHLGADSLLIVGLTLLFTGIVLTLQIAHEFIRYGAQSTIGAVIAIGIGRELGPV 100

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           L  V+ AGR G+AI AE+ +MK+ E+IDA+R M +  V  LI PR+ A ++ +P+LT+  
Sbjct: 101 LVGVVCAGRVGAAITAEVSTMKVTEQIDALRVMAVSPVNYLIVPRMLACMVVVPILTVFG 160

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
           +   ++G       Y  I    F       A + ++  GLIKA F    I ++    G  
Sbjct: 161 DVIGVLGGYFTAVYYSGISGYTFLHSITQYAEIYDMTGGLIKAIFFGNVIAVLGCHYGLN 220

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               +  +G      VV SI ++ I++++   F F
Sbjct: 221 APGGAEGVGTATMQTVVTSIIVIFILNAVLTFFLF 255


>gi|148261852|ref|YP_001235979.1| hypothetical protein Acry_2870 [Acidiphilium cryptum JF-5]
 gi|146403533|gb|ABQ32060.1| protein of unknown function DUF140 [Acidiphilium cryptum JF-5]
          Length = 260

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 115/217 (52%), Gaps = 8/217 (3%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           R +  +G S +PVV L +  TG V+A Q     S+F +      ++ +   RE+G +L  
Sbjct: 48  RALMEIGYSSLPVVALTAVFTGMVLALQSYVGFSRFDSSSVIASVVVLSLTRELGPVLAG 107

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +M+AGR+GSAI AE+G+M++ ++IDA+ T+  D +R L++PR+ A +I+LPLL ++A+  
Sbjct: 108 LMVAGRAGSAIAAEMGTMRVTDQIDALTTLATDPMRYLVTPRLLAGVIALPLLVVIADIL 167

Query: 278 AIIGASIVIWKYYDIPFAVFF----SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
            + G  +V           +     +  HS     ++ +GL+KA      I ++    G+
Sbjct: 168 GVAGGFLVSTVRLGFEPNAYLRDTVNYLHSN----DVVSGLVKAAVFGFVIALMGCFHGY 223

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                +  +G   T  VV +  +++ +D L    +F+
Sbjct: 224 RSRGGAQGVGGATTAAVVSASVLILALDYLMTQAFFS 260


>gi|222055035|ref|YP_002537397.1| protein of unknown function DUF140 [Geobacter sp. FRC-32]
 gi|221564324|gb|ACM20296.1| protein of unknown function DUF140 [Geobacter sp. FRC-32]
          Length = 257

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 116/212 (54%), Gaps = 1/212 (0%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           Q+  +GV  + +VIL    TG V+A Q   QL  F A  +   ++++  ++E+G +L+++
Sbjct: 44  QLDKIGVGSLFIVILTGLFTGMVMALQALIQLKPFAATSYVGGMVAVTMVKELGPVLSSL 103

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           M+AGR GSAI AE+G+M + E++DA++  G D ++ L++ R+ A++I++PLL I+ +  +
Sbjct: 104 MVAGRVGSAITAELGTMVVTEQVDAMQVEGTDIIKRLVTSRLKAIVIAMPLLAIITDAVS 163

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           ++G  I +   YDI   +++          ++  G++K       I +V    G +    
Sbjct: 164 LVGGYI-MAANYDINIIMYWKSIPQFMVFQDLIEGVVKPAVFGFIIAMVGCHVGLSTNGG 222

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  +G+     VV S   +++ D   A  + A
Sbjct: 223 AAGVGESAKRAVVISSVSILVTDFFIAKIFIA 254


>gi|82703861|ref|YP_413427.1| hypothetical protein Nmul_A2748 [Nitrosospira multiformis ATCC
           25196]
 gi|82411926|gb|ABB76035.1| Protein of unknown function DUF140 [Nitrosospira multiformis ATCC
           25196]
          Length = 265

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 115/215 (53%), Gaps = 1/215 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +IR++Y+ GV  + ++++     G V+  QG   L ++GAE     ++++  LRE+G ++
Sbjct: 47  VIRELYFTGVQSLIIILVSGLFVGMVLGLQGFETLQRYGAESAVGTMVALSLLRELGPVV 106

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           +A++ A R+GSAI AEIG MK  E++ A+  M +D +  +++PR WA +IS+PLL  L +
Sbjct: 107 SALLFASRAGSAITAEIGLMKATEQLAAMEMMAVDPIARVVAPRFWAGVISMPLLAALFS 166

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G  +V      +    F+S+  S      ++  G+IK      A+  +A+ EG+ 
Sbjct: 167 AIGIYGGYLVAVVLIGVDEGSFWSQMQSAVDFRYDVVNGIIKTCVFGIAVTAIAVFEGYD 226

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               +  +    T  VV S   ++ +D +   F F
Sbjct: 227 AAPTAEGVSGATTRTVVTSSLAILGLDFILTSFMF 261


>gi|22298988|ref|NP_682235.1| hypothetical protein tlr1445 [Thermosynechococcus elongatus BP-1]
 gi|22295170|dbj|BAC08997.1| ycf63 [Thermosynechococcus elongatus BP-1]
          Length = 267

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 111/209 (53%)

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           L +LI QM  VG + + V ++ +   G V   Q A +   FGA      +++I   RE+G
Sbjct: 41  LRNLIEQMALVGPASLSVALITAAFVGMVFTIQVAREFIAFGATSAVGGVLAIALARELG 100

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            +LTAV++AGR GSA  AEIG+MK+ E+IDA+  +G + V  L+ PR  A ++ LP+L I
Sbjct: 101 PVLTAVVLAGRVGSAFAAEIGTMKVTEQIDALYMLGTNPVDYLVVPRFIACVVMLPILNI 160

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           LA  + + G  I+    Y IP  V+     +     ++++ +IK+      + I+    G
Sbjct: 161 LALVTGLWGGLIIGDYLYGIPPGVYIESIQNFLQTWDLWSSIIKSGIFGGVVAIIGCSWG 220

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                 +  +G+  T  VV S+  + I++
Sbjct: 221 ITTTGGAKGVGQSTTAAVVISLLAIFILN 249


>gi|149378023|ref|ZP_01895747.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Marinobacter algicola
           DG893]
 gi|149357678|gb|EDM46176.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Marinobacter algicola
           DG893]
          Length = 259

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 120/212 (56%), Gaps = 2/212 (0%)

Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210
           GF L L++Q+Y VGV  + ++++     G V+  QG   LS +G+E     ++++  +RE
Sbjct: 38  GFPL-LLKQLYSVGVLSLAIIVVSGLFIGMVLGLQGYTILSDYGSEAAIGQMIALTLVRE 96

Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
           +G ++TA++ AGR+GSA+ AEIG MK  E++ ++  MG+D +R +I+PR+WA  IS+P+L
Sbjct: 97  LGPVVTALLFAGRAGSALTAEIGLMKATEQLSSMEMMGVDPLRRVIAPRLWAGFISVPVL 156

Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAM 329
             + +   I G  +V  ++  +    F+    S+ +  A++  G++K+         +A+
Sbjct: 157 AAVFSVVGIWGGMLVGVEWLGVFEGSFWGNMQSSVSFTADVLNGVVKSLVFGFVCTWIAV 216

Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            +G+     S  +    T  VV S   V+ +D
Sbjct: 217 YQGYDCVPTSAGISAATTKTVVYSSLAVLGLD 248


>gi|255319835|ref|ZP_05361040.1| toluene tolerance efflux transporter [Acinetobacter radioresistens
           SK82]
 gi|262380367|ref|ZP_06073521.1| toluene tolerance efflux transporter [Acinetobacter radioresistens
           SH164]
 gi|255303154|gb|EET82366.1| toluene tolerance efflux transporter [Acinetobacter radioresistens
           SK82]
 gi|262297813|gb|EEY85728.1| toluene tolerance efflux transporter [Acinetobacter radioresistens
           SH164]
          Length = 258

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 109/198 (55%), Gaps = 1/198 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I QMY VGV  + ++ +     G V+  QG   L   G+E     ++++  LRE+  ++ 
Sbjct: 42  IYQMYRVGVMSLLIITVSGLFIGLVLGLQGYSILVNVGSEAMLGTMVALTLLRELAPVVA 101

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+GSA+ AEIG MK  E++ ++  +G+D ++ ++SPR+WA I+SLP+LT++   
Sbjct: 102 ALLFAGRAGSALTAEIGLMKATEQLSSMEMIGVDPLKRIVSPRLWAGIVSLPMLTVIFGA 161

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAV 335
             I+G  +V   +  +    F+S   S+     ++  G+IK+   A     +A+ +G+A 
Sbjct: 162 VGILGGKLVGVDFLGVDEGSFWSGMQSSVQFGHDVVNGIIKSTVFALICTWIAVYQGYAC 221

Query: 336 GVHSNSLGKKVTTCVVQS 353
              S  +    T  VV S
Sbjct: 222 EPTSEGIATSTTRTVVFS 239


>gi|304310283|ref|YP_003809881.1| Toluene tolerance ABC efflux transporter, permease [gamma
           proteobacterium HdN1]
 gi|301796016|emb|CBL44220.1| Toluene tolerance ABC efflux transporter, permease [gamma
           proteobacterium HdN1]
          Length = 260

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 118/207 (57%), Gaps = 1/207 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y +GV  + ++++     G V+A QG   L+QFG+E     L+++  LRE+G ++
Sbjct: 43  LVKQIYSIGVLSLVIIVVSGVFIGMVLALQGYHILTQFGSEEALGQLVALSLLRELGPVV 102

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ AGR+GSA+ AEIG MK  E++ +   +G+D +R +I+PR WA  I +P L ++ +
Sbjct: 103 AALLFAGRAGSALTAEIGLMKATEQLASFEMIGVDPLRRIIAPRFWAGFICMPTLAVIFS 162

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              +IGA +V  K+  +    F++   ++     ++  G+IK+      +  +A+ +G+ 
Sbjct: 163 AVGVIGAYLVGVKWLGVYDGSFWANMQNSVEWGEDVVNGVIKSFAFGAVVTWIAVFQGYD 222

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIID 361
               S  + +  T  VV S   V+ +D
Sbjct: 223 CIPTSEGISRATTRTVVFSSLAVLGLD 249


>gi|227358279|ref|ZP_03842620.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Proteus mirabilis ATCC 29906]
 gi|227161615|gb|EEI46652.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Proteus mirabilis ATCC 29906]
          Length = 259

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 118/222 (53%), Gaps = 13/222 (5%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           L++Q+Y VGV  + ++++     G V+  QG   L+ F AE  S+ +M  L L RE+G +
Sbjct: 43  LMKQLYSVGVQSLLIIMVSGLFIGMVLGLQGYLVLTTFSAEA-SLGMMVALSLLRELGPV 101

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGR+GSA+ AEIG MK  E+I ++  M +D +R +++PR WA  IS+PLL+++ 
Sbjct: 102 VTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLRRVVAPRFWAGFISMPLLSLIF 161

Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTAT----LANIFTGLIKAPFMACAIGIVA 328
               I G +I  V WK  D  F  F++           L N F   IK+   A  +  +A
Sbjct: 162 VAVGIWGGAIVGVDWKGIDEGF--FWASMQGAVEWQKDLVNCF---IKSVVFAITVTWIA 216

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 217 LFNGYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 258


>gi|91201081|emb|CAJ74139.1| strongly similar to ABC-transporter, permease [Candidatus Kuenenia
           stuttgartiensis]
          Length = 260

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 111/206 (53%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +I+Q+ ++GV  V V++L    TG V+A Q  + L +FGAE      +++  ++E+G ++
Sbjct: 46  IIKQINFIGVKTVLVIVLTGTFTGMVLALQMYYVLIKFGAEARLGPAVAMSLIKELGPVI 105

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A+M+ GR+GSAI AEIG M+I+E++DA+  M L+  + LI P I A +ISLPLL  +  
Sbjct: 106 CALMVTGRAGSAITAEIGIMRISEQVDALDAMALNPYKYLIIPNIIAGVISLPLLNAIFV 165

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              + G   V      +    +F   +      ++F G  K+      I  ++  +GF  
Sbjct: 166 VLGVFGGYAVGVGLMGVSSGTYFGGINDFVAARDVFEGFYKSLSFGVLITWISCYKGFYT 225

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361
           G  +  + K  T  VV S  +++I D
Sbjct: 226 GYGAEGVSKATTQSVVISSVVILIWD 251


>gi|311695326|gb|ADP98199.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [marine bacterium HP15]
          Length = 260

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 118/213 (55%), Gaps = 2/213 (0%)

Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209
            GF L L++Q+Y VGV  + +V++     G V+  QG   LS +G+E     ++++  +R
Sbjct: 38  TGFPL-LMKQIYAVGVLSLAIVVVSGLFIGMVLGLQGYTILSDYGSEAAIGQMIALTLVR 96

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
           E+G ++TA++ AGR+GSA+ AEIG MK  E++ ++  MG+D +R +I+PR+WA  I++P+
Sbjct: 97  ELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSMEMMGVDPLRRVIAPRLWAGFIAMPV 156

Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVA 328
           L ++ +   I G  +V   +  +    F+    S+     ++  G+IK+         +A
Sbjct: 157 LAVIFSVVGIWGGMLVGVDWLGVFEGSFWGNMQSSVDFVDDVLNGVIKSVVFGFVCAWIA 216

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           + +G+     S  +    T  VV S   V+ +D
Sbjct: 217 VYQGYDCVPTSAGISSATTKTVVYSSLAVLGLD 249


>gi|197287459|ref|YP_002153331.1| hypothetical protein PMI3656 [Proteus mirabilis HI4320]
 gi|194684946|emb|CAR47136.1| putative membrane protein [Proteus mirabilis HI4320]
          Length = 259

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 118/222 (53%), Gaps = 13/222 (5%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           L++Q+Y VGV  + ++++     G V+  QG   L+ F AE  S+ +M  L L RE+G +
Sbjct: 43  LMKQLYSVGVQSLLIIMVSGLFIGMVLGLQGYLVLTTFSAEA-SLGMMVALSLLRELGPV 101

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGR+GSA+ AEIG MK  E+I ++  M +D +R +++PR WA  IS+PLL+++ 
Sbjct: 102 VTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLRRVVAPRFWAGFISMPLLSLIF 161

Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTAT----LANIFTGLIKAPFMACAIGIVA 328
               I G +I  V WK  D  F  F++           L N F   IK+   A  +  +A
Sbjct: 162 VAVGIWGGAIVGVDWKGIDEGF--FWASMQGAVEWQKDLVNCF---IKSVVFAITVTWIA 216

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 217 LFNGYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 258


>gi|162456584|ref|YP_001618951.1| putative ABC transport system permease protein [Sorangium
           cellulosum 'So ce 56']
 gi|161167166|emb|CAN98471.1| putative ABC transport system permease protein [Sorangium
           cellulosum 'So ce 56']
          Length = 266

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 107/202 (52%)

Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219
           M ++G   V +V L    +G V+  Q ++ L  F AE     L+++   RE+  + +A+M
Sbjct: 55  MDFMGAQSVFIVGLTGVFSGMVVTLQTSYALRAFSAEGRVGGLVAVSLARELAPVFSAIM 114

Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279
           +  R+GSA+ AE+G+M++ E+IDAI TMG+  V+ L+SPR++A  + LPLL IL     +
Sbjct: 115 VTARAGSAMAAELGNMRVTEQIDAIATMGVSPVQYLLSPRLFAATVMLPLLCILYTSVGM 174

Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339
            G+ +V   +       FF      A   +I  GLIKA      +  ++ + GF     +
Sbjct: 175 CGSYLVAVLWLGGDEGAFFQSIRDFALPKDISMGLIKACVFGFIVSSISCRHGFYASGGA 234

Query: 340 NSLGKKVTTCVVQSISIVIIID 361
             +G   T  VV+S   V++ +
Sbjct: 235 RGVGVATTRAVVESCVTVLVTN 256


>gi|305664733|ref|YP_003861020.1| organic solvents resistance ABC transporter [Maribacter sp.
           HTCC2170]
 gi|88707855|gb|EAR00094.1| ABC-type transport system involved in resistance to organic
           solvents [Maribacter sp. HTCC2170]
          Length = 264

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 115/221 (52%), Gaps = 4/221 (1%)

Query: 141 EFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSI 200
           E     Y+FK     L+RQ Y +G   + +V +  F+ G V+  Q    L +FGA  +  
Sbjct: 35  EALKPPYEFK----ELLRQCYNMGNRSLVLVGVTGFIIGLVLTLQSRPTLIEFGAVSWMP 90

Query: 201 DLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRI 260
           +++ I  +REIG ++TA++ AGR  S I AE+GSM++ E+IDA+   G +  + L+  RI
Sbjct: 91  NMVGISIVREIGPVITALICAGRIASGIGAELGSMRVTEQIDAMEVSGTNPFKYLVVTRI 150

Query: 261 WALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320
            A  + LPLL I  +  A+ G+++V     ++ F ++F+         ++    IK+ F 
Sbjct: 151 MATTLMLPLLVIFGDLVALYGSALVENLKGNVSFQLYFNTVFDALEFGDLIPATIKSFFF 210

Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
              IG+V   +G+     +  +G    T VV +  ++  +D
Sbjct: 211 GFTIGLVGCYKGYYSKKGTAGVGVAANTAVVLASLLLFFVD 251


>gi|50119256|ref|YP_048423.1| hypothetical protein ECA0296 [Pectobacterium atrosepticum SCRI1043]
 gi|49609782|emb|CAG73216.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043]
          Length = 260

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 118/219 (53%), Gaps = 7/219 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           L++Q+Y VGV  + ++I+     G V+  QG   L+ + AE  S+ +M  L L RE+G +
Sbjct: 44  LVKQLYSVGVQSLLIIIVSGLFIGMVLGLQGYIILTTYSAEA-SLGMMVALSLLRELGPV 102

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +++PR WA +IS+PLL ++ 
Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVVAPRFWAGLISMPLLAVIF 162

Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331
               I G ++  V WK  D  F  F+S          ++   +IK+   A  +  +A+  
Sbjct: 163 VAVGIWGGALVGVDWKGIDSGF--FWSAMQGAVDWRQDVLNCVIKSIVFAITVTWIALFN 220

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 221 GYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|114776717|ref|ZP_01451760.1| hypothetical protein SPV1_10896 [Mariprofundus ferrooxydans PV-1]
 gi|114552803|gb|EAU55234.1| hypothetical protein SPV1_10896 [Mariprofundus ferrooxydans PV-1]
          Length = 266

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 132/257 (51%), Gaps = 7/257 (2%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172
            +G+  ++ I +    A +LGL       F    ++ K F+L    Q+  +GV  + ++I
Sbjct: 17  RLGRHALRGI-EQIGDATMLGL--GALSLFFVRPWQGKHFVL----QLSALGVGSLIIII 69

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
           +    TG V+A QG + L++FG+E      + +  +RE+G +L A M+ GR+GS+I AEI
Sbjct: 70  ITGAFTGMVLALQGYYTLAKFGSESLLGAGVGMSIIRELGPVLGAFMVIGRAGSSITAEI 129

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           G M++ E+ DA+  M ++  + ++ PRI A  I++PLL  + +   I    IV  +   +
Sbjct: 130 GIMRVTEQTDALEMMAINPKQRILLPRIVATTIAVPLLVSIFDVIGIGSGYIVGVELLGV 189

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
               + +   ST T+ +I+ G +KA      IG++    G+     +  + +  T  VV 
Sbjct: 190 NPGAYMAELVSTVTMHDIYGGWVKAVVFGFMIGMICTYMGYRSEPTTEGVARATTQAVVV 249

Query: 353 SISIVIIIDSLFAIFYF 369
           S   V+I+D +   FY 
Sbjct: 250 SSVTVLILDYILTSFYL 266


>gi|307129071|ref|YP_003881087.1| putative toluene transporter subunit: membrane protein [Dickeya
           dadantii 3937]
 gi|306526600|gb|ADM96530.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Dickeya dadantii 3937]
          Length = 260

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 119/219 (54%), Gaps = 7/219 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           L +Q+Y VGV  + ++++     G V+  QG   L+ + AE  S+ +M  L L RE+G +
Sbjct: 44  LRKQLYSVGVQSLLIIMVSGVFIGMVLGLQGYLVLTTYSAEA-SLGMMVALSLLRELGPV 102

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +++PR WA +IS+PLLT++ 
Sbjct: 103 VTALLFAGRAGSALTAEIGLMKTTEQLSSMEMMAVDPLRRVVAPRFWAGVISMPLLTVIF 162

Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331
               I G ++  V WK  D  F  F+S   +      ++   +IK+   A  +  +A+  
Sbjct: 163 VAVGIWGGALVGVDWKGIDSGF--FWSAMQNAVEWRKDLLNCVIKSLVFAITVTWIALFN 220

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 221 GYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|56459515|ref|YP_154796.1| ABC-type transport system involved in resistance to organic
           solvents, permease [Idiomarina loihiensis L2TR]
 gi|56178525|gb|AAV81247.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Idiomarina loihiensis
           L2TR]
          Length = 259

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 110/198 (55%), Gaps = 1/198 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I+QMY VGV  + +VI+     G V+  QG   L  +GAE     ++++  LRE+G ++T
Sbjct: 44  IKQMYVVGVLSMLIVIVSGLFIGMVLGLQGYTILVDYGAEQSLGPMVALSLLRELGPVVT 103

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
            ++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA ++S+PLL ++ + 
Sbjct: 104 GLLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVVSMPLLALMFSA 163

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAV 335
             I G  +V   +  +    F+S   S      ++  G+IK+   A  +  +A+ +G+  
Sbjct: 164 VGIYGGYLVGSGWLGVDEGAFWSVMQSAVDWQDDLLNGIIKSIVFAFVVTWIALYKGYRS 223

Query: 336 GVHSNSLGKKVTTCVVQS 353
              S  +    T+ VV +
Sbjct: 224 VPTSAGISAATTSTVVTA 241


>gi|77166237|ref|YP_344762.1| hypothetical protein Noc_2785 [Nitrosococcus oceani ATCC 19707]
 gi|254435217|ref|ZP_05048724.1| conserved hypothetical protein [Nitrosococcus oceani AFC27]
 gi|76884551|gb|ABA59232.1| Protein of unknown function DUF140 [Nitrosococcus oceani ATCC
           19707]
 gi|207088328|gb|EDZ65600.1| conserved hypothetical protein [Nitrosococcus oceani AFC27]
          Length = 260

 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 115/216 (53%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI Q+Y VGV  +P++++     G V+  QG   L  FGAE     ++S+  +RE+G ++
Sbjct: 43  LITQVYSVGVLTLPIIVVSGAFVGMVLGLQGYNTLVDFGAEESLGVIVSLSLVRELGPVV 102

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           +A++ AGR+GSA+ AEIG MK  E++  +  M +D VR + +PR +A   S+PLL  + +
Sbjct: 103 SALLFAGRAGSALTAEIGLMKATEQLSGMEMMAVDPVRRIAAPRFFAGCFSMPLLAAIFS 162

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFH-STATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
              ++G   V      +    F+S+   ST    ++  G+IK+      +  +A+ EG+ 
Sbjct: 163 AVGVLGGYFVGVGLLGVDEGAFWSQMQASTDWKEDVLNGVIKSIVFGIVVTWIAVFEGYD 222

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S+ +G+  T  VV S   V+ +D +     F 
Sbjct: 223 AVPTSDGVGRATTRTVVHSAFAVLALDFVLTALMFG 258


>gi|75907908|ref|YP_322204.1| hypothetical protein Ava_1687 [Anabaena variabilis ATCC 29413]
 gi|75701633|gb|ABA21309.1| Protein of unknown function DUF140 [Anabaena variabilis ATCC 29413]
          Length = 263

 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 106/202 (52%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
            QM  VG   + + +L +   GAV   Q A +   FGA      ++++   RE+  +LTA
Sbjct: 41  EQMAAVGPDSLFIALLTAVFVGAVFTIQVAREFINFGAGNLVGGVLAVALTRELSPVLTA 100

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           V++AGR GSA  AEIG+M++ E+IDA+  +  D +  L+ PR+ A  + LP+LT+L+  +
Sbjct: 101 VILAGRVGSAFAAEIGTMRVTEQIDAMLMLKTDPIDYLVIPRLLACFLMLPILTLLSLVT 160

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            I+G  I+    Y I   VF     +   + +I + +IKA      I I+    G     
Sbjct: 161 GILGGLIIATNMYGISDTVFLDSARNLLEVWDICSAMIKACCFGVLIAIIGCSWGLTTTG 220

Query: 338 HSNSLGKKVTTCVVQSISIVII 359
            +  +G+  TT VV ++ I+ +
Sbjct: 221 GAKGVGQSTTTAVVTALLIIFV 242


>gi|300113019|ref|YP_003759594.1| hypothetical protein Nwat_0303 [Nitrosococcus watsonii C-113]
 gi|299538956|gb|ADJ27273.1| protein of unknown function DUF140 [Nitrosococcus watsonii C-113]
          Length = 260

 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 115/216 (53%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI Q+Y VGV  +P++++     G V+  QG   L  FGAE     ++S+  +RE+G ++
Sbjct: 43  LITQVYSVGVLTLPIIVVSGAFVGMVLGLQGYNTLVDFGAEESLGVIVSLSLVRELGPVV 102

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           +A++ AGR+GSA+ AEIG MK  E++  +  M +D VR + +PR +A   S+PLL  + +
Sbjct: 103 SALLFAGRAGSALTAEIGLMKATEQLSGMEMMAVDPVRRIAAPRFFAGCFSMPLLAAIFS 162

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFH-STATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
              ++G   V      +    F+S+   ST    ++  G+IK+      +  +A+ EG+ 
Sbjct: 163 AVGVLGGYFVGVGLLGVDEGAFWSQMQASTDWEEDVLNGVIKSIVFGIVVTWIAVFEGYD 222

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S+ +G+  T  VV S   V+ +D +     F 
Sbjct: 223 TVPTSDGVGRATTRTVVHSAFAVLALDFVLTALMFG 258


>gi|288962766|ref|YP_003453060.1| ABC transport system permease protein [Azospirillum sp. B510]
 gi|288915032|dbj|BAI76516.1| ABC transport system permease protein [Azospirillum sp. B510]
          Length = 258

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 119/217 (54%), Gaps = 4/217 (1%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE--IFSIDLMSILQLREIGV 213
           ++RQM  +G   +PVV L +  TG V+A Q     S+F AE  I ++ ++SI   RE+G 
Sbjct: 42  ILRQMIDIGYYSLPVVGLTALFTGMVLALQSYSGFSRFQAEGAIATVVVLSIT--RELGP 99

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           +L  +M+AGR G+A+ AEIG+M++ E+IDA+ T+  +  + L++PR+ A +  +PLL ++
Sbjct: 100 VLAGLMVAGRIGAAMAAEIGTMRVTEQIDALSTLSTNPYKYLVAPRLIAGLTMVPLLVVV 159

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
           A+   + G  +V     D   A + +R        ++ +GL+KA      I ++    G+
Sbjct: 160 ADIIGVFGGFLVGVYRLDFNAASYINRTWEFLQPVDVISGLVKAAIFGFLIALMGCYHGY 219

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                +  +G   T  VV +  ++++ + L    +F+
Sbjct: 220 HSKGGAQGVGAATTNAVVSASIMILVWNYLITGLFFS 256


>gi|16330753|ref|NP_441481.1| hypothetical protein slr1344 [Synechocystis sp. PCC 6803]
 gi|1653246|dbj|BAA18161.1| slr1344 [Synechocystis sp. PCC 6803]
          Length = 283

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 111/212 (52%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q+ +VG + +P+ ++ + V G +   Q A +   FGA      ++ +   RE+  ++TA
Sbjct: 60  QQLMFVGPASLPITLITAAVIGMIFTIQVAREFLAFGAGSAVGGILMLALGRELCPIMTA 119

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           V++AGR GSA  AEIG+M++ E+IDA+  +  + V  L+ PR+ A  I +P L++LA  +
Sbjct: 120 VVVAGRVGSAFAAEIGTMRVTEQIDALYMLNTNPVEYLVIPRLLACCIMVPTLSVLALVT 179

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            ++G +++    Y I   VFF    +  T  +IF G +K       I I+    G     
Sbjct: 180 GMMGGAVISSNVYGIANQVFFESIQTFVTPWDIFCGPVKGIVFGVLIAIIGCNWGLTTRG 239

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
            +  +G+  T  VV S+  + + + L +   F
Sbjct: 240 GAKGVGESTTAAVVTSLLAIFVSNFLMSWIMF 271


>gi|189423561|ref|YP_001950738.1| hypothetical protein Glov_0490 [Geobacter lovleyi SZ]
 gi|189419820|gb|ACD94218.1| protein of unknown function DUF140 [Geobacter lovleyi SZ]
          Length = 257

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 112/199 (56%), Gaps = 1/199 (0%)

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           +G S + + +L    TG V+A Q   QL  F A  +   ++++  ++E+G +L A+M+AG
Sbjct: 49  LGFSSLFICVLTGLFTGMVMALQALIQLKPFAATSYVGGMVAVTMIKELGPVLAALMVAG 108

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           R GSAI AE+G+M + E++DA+R  G D ++ L++PR+ A++++LPLLTI+ +  +++G 
Sbjct: 109 RVGSAITAELGTMVVTEQVDAMRVEGTDIIQRLVTPRLKAMLLALPLLTIITDAVSMLGG 168

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
            + I   Y I   ++ S F       +   G+ K    A  I +++ + G   G  +  +
Sbjct: 169 YL-IASGYSISPVMYLSTFTQFMVPLDYLEGVTKPLVFAFLITMISCQTGLNTGGGAEGV 227

Query: 343 GKKVTTCVVQSISIVIIID 361
           G      VV S  +V++ D
Sbjct: 228 GAAAKRAVVLSSVLVLMCD 246


>gi|271498870|ref|YP_003331895.1| hypothetical protein Dd586_0293 [Dickeya dadantii Ech586]
 gi|270342425|gb|ACZ75190.1| protein of unknown function DUF140 [Dickeya dadantii Ech586]
          Length = 260

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 119/219 (54%), Gaps = 7/219 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           L +Q+Y VGV  + ++++     G V+  QG   L+ + AE  S+ +M  L L RE+G +
Sbjct: 44  LRKQLYSVGVQSLLIIMVSGVFIGMVLGLQGYLVLTTYSAEA-SLGMMVALSLLRELGPV 102

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +++PR WA +IS+PLLT++ 
Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVVAPRFWAGVISMPLLTVIF 162

Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331
               I G ++  V WK  D  F  F+S   +      ++   +IK+   A  +  +A+  
Sbjct: 163 VAVGIWGGALVGVDWKGIDSGF--FWSAMQNAVEWQKDLLNCVIKSLVFAITVTWIALFN 220

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 221 GYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|253686687|ref|YP_003015877.1| hypothetical protein PC1_0282 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251753265|gb|ACT11341.1| protein of unknown function DUF140 [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 260

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 118/219 (53%), Gaps = 7/219 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           L++Q+Y VGV  + ++++     G V+  QG   L+ + AE  S+ +M  L L RE+G +
Sbjct: 44  LVKQLYSVGVQSLLIIMVSGLFIGMVLGLQGYIVLTTYSAEA-SLGMMVALSLLRELGPV 102

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +++PR WA +IS+PLL ++ 
Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVVAPRFWAGLISMPLLAVIF 162

Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331
               I G ++  V WK  D  F  F+S          ++   +IK+   A  +  +A+  
Sbjct: 163 VAVGIWGGALVGVDWKGIDSGF--FWSAMQGAVDWRQDVLNCVIKSVVFAITVTWIALFN 220

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 221 GYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|227326638|ref|ZP_03830662.1| hypothetical protein PcarcW_04664 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 260

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 118/219 (53%), Gaps = 7/219 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           L++Q+Y VGV  + ++++     G V+  QG   L+ + AE  S+ +M  L L RE+G +
Sbjct: 44  LVKQLYSVGVQSLLIIMVSGLFIGMVLGLQGYLILTTYSAEA-SLGMMVALSLLRELGPV 102

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +++PR WA +IS+PLL ++ 
Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVVAPRFWAGLISMPLLAVIF 162

Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331
               I G ++  V WK  D  F  F+S          ++   +IK+   A  +  +A+  
Sbjct: 163 VAVGIWGGALVGVDWKGIDSGF--FWSAMQGAVDWRQDVLNCVIKSIVFAITVTWIALFN 220

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 221 GYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|172039649|ref|YP_001806150.1| hypothetical protein cce_4736 [Cyanothece sp. ATCC 51142]
 gi|171701103|gb|ACB54084.1| DUF140-containing protein [Cyanothece sp. ATCC 51142]
          Length = 263

 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 107/205 (52%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + QM  VG   V + ++ +   G V   Q A +   FGA      ++++   RE+  +LT
Sbjct: 43  LEQMSVVGPESVTIALITAGFVGMVFTIQVAREFISFGAASTVGGVLALALTRELAPVLT 102

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV++AGR GSA  AEIG+M++ E+IDA+  +  D +  L+ PR+ A  + LP+L IL+  
Sbjct: 103 AVVVAGRVGSAFAAEIGTMRVTEQIDALYMLKTDPIDYLVVPRVLACCLMLPVLNILSLL 162

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           + + G  ++    YDI   VF +   +   L ++ T +IK+      I ++    G    
Sbjct: 163 TGMTGGLLIANGLYDISPYVFLTSVRNFLELWDLVTSMIKSVAFGGLIAVIGCSWGLTTT 222

Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361
             +  +G+  TT VV S+  V +I+
Sbjct: 223 GGAKGVGQSTTTAVVTSLLAVFVIN 247


>gi|294056022|ref|YP_003549680.1| protein of unknown function DUF140 [Coraliomargarita akajimensis
           DSM 45221]
 gi|293615355|gb|ADE55510.1| protein of unknown function DUF140 [Coraliomargarita akajimensis
           DSM 45221]
          Length = 258

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 96/162 (59%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+  ++ +GV  VP+V+++    G V+  Q  + L + GAE    D + +  +RE+G +L
Sbjct: 40  LLSAIFEIGVRCVPIVLVVGLFAGLVMGLQLYYTLVRLGAEAALGDAIGLSLVRELGPVL 99

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA+M+ G++GSA+ +E+G  + +E+IDA++TMG++    L+ PR+WA +I  P+LT L +
Sbjct: 100 TALMVVGQAGSALASELGIQRNDEQIDALQTMGIEPRGYLVGPRLWAALICFPMLTALFD 159

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
              I G  +       +   V+++  + +    +++ G IKA
Sbjct: 160 LIGIYGGYLTGSVLLHVDSGVYWTHVYKSVQWDDVWGGFIKA 201


>gi|162146610|ref|YP_001601069.1| hypothetical protein GDI_0788 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161785185|emb|CAP54731.1| putative membrane protein [Gluconacetobacter diazotrophicus PAl 5]
          Length = 373

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 118/221 (53%), Gaps = 3/221 (1%)

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           L+S IR     G S + +V +++F+ GA++A  GA QL +F A+I+   L+ I  +RE+ 
Sbjct: 156 LMSNIRD---AGPSALLIVSVVNFLVGAILAFVGAVQLRKFAADIYVASLVGIAMVREMS 212

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            ++TA+++AGR+G A  A I +M+ NEEIDA+   G+     LI P I  L+ ++P L +
Sbjct: 213 AVMTAIIMAGRTGGAYAARIATMQGNEEIDALTVFGIPVSSYLILPSILGLVATMPFLYL 272

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
                 ++G   V      +  A +F +  +   L     G IK+ F A  IG+ + + G
Sbjct: 273 YGCLIGMLGGFTVAISMLAVTGAGYFHQTINAVGLNQFEFGFIKSIFFAILIGLTSCRIG 332

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
              G  +  +G   T  VV  I  VI +D++FA+    +GI
Sbjct: 333 LRSGRSAADVGVAATRAVVVGIVGVITLDAIFAVIATTLGI 373


>gi|114330858|ref|YP_747080.1| hypothetical protein Neut_0852 [Nitrosomonas eutropha C91]
 gi|114307872|gb|ABI59115.1| protein of unknown function DUF140 [Nitrosomonas eutropha C91]
          Length = 265

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 113/213 (53%), Gaps = 1/213 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           R++YY GV  + ++++     G V+  QG   L +FG+E     L+++  +RE+G ++ A
Sbjct: 49  REIYYAGVMSLIIILVSGLFVGMVLGLQGYETLQKFGSESAVGTLVALSLVRELGPVIAA 108

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ A R+GSA+ AEIG MK  E++ A+  M +D +  +++PR W  + S+PLL  + +  
Sbjct: 109 LLFASRAGSAMTAEIGLMKATEQLAAMGMMAVDPIARIVAPRFWGGVFSMPLLAAMFSVM 168

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            + G  +V   +  +    F+S+  S+     +I  G+IK+ F    +  +A+ EGF   
Sbjct: 169 GVFGGYLVTVIFIGVDEGSFWSQMQSSVDFRYDIVNGVIKSCFFGVVVTAIAVFEGFDAP 228

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
             +  +    T  VV S   ++ +D +   F F
Sbjct: 229 PTAEGVSGATTRTVVTSALAILGLDFVLTAFMF 261


>gi|255034005|ref|YP_003084626.1| hypothetical protein Dfer_0190 [Dyadobacter fermentans DSM 18053]
 gi|254946761|gb|ACT91461.1| protein of unknown function DUF140 [Dyadobacter fermentans DSM
           18053]
          Length = 262

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 110/204 (53%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +++Q Y +G   + ++ L  F+TG V  +Q    LS+FGA  +   L++I  +R +  L+
Sbjct: 45  IVKQCYAIGNKSLLLISLTGFITGMVFTKQSRPSLSEFGATSWLPSLVAIAIVRALAPLV 104

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AG+ GS+I AE+GSM++ E+IDA+    ++  + L+  R+ A  I++P+L     
Sbjct: 105 TALISAGKIGSSIGAELGSMRVTEQIDAMEVSAVNPFKFLVVTRVVACTIAIPVLMFYCA 164

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             +++GA + +       F  FF       T  +I+T + KA      IGIV   +G+  
Sbjct: 165 LVSLLGAYLNVTLNEGTSFIAFFENAFEQITFLDIWTSVAKAIAYGFTIGIVGSYQGYNA 224

Query: 336 GVHSNSLGKKVTTCVVQSISIVII 359
              +  +GK   + VV S+ ++ I
Sbjct: 225 SKGTEGVGKAANSAVVTSMFLIFI 248


>gi|89255923|ref|YP_513285.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica LVS]
 gi|115314405|ref|YP_763128.1| toluene ABC transporter ATP-binding/membrane protein [Francisella
           tularensis subsp. holarctica OSU18]
 gi|167009174|ref|ZP_02274105.1| toluene ABC superfamily ATP binding cassette transporter, membrane
           protein [Francisella tularensis subsp. holarctica
           FSC200]
 gi|169656537|ref|YP_001427977.2| toluene tolerance protein [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|254367281|ref|ZP_04983308.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica 257]
 gi|290953704|ref|ZP_06558325.1| putative ABC transport system permease protein [Francisella
           tularensis subsp. holarctica URFT1]
 gi|295312939|ref|ZP_06803658.1| putative ABC transport system permease protein [Francisella
           tularensis subsp. holarctica URFT1]
 gi|89143754|emb|CAJ78956.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica LVS]
 gi|115129304|gb|ABI82491.1| toluene ABC superfamily ATP binding cassette transporter, membrane
           protein [Francisella tularensis subsp. holarctica OSU18]
 gi|134253098|gb|EBA52192.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica 257]
 gi|164551605|gb|ABU61021.2| toluene tolerance protein [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 254

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 113/195 (57%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I Q+  VGV+ + +++      G V++ QG + LS+FGA      ++++  LRE+G ++T
Sbjct: 39  IIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGAHSLLGVMVALSVLRELGPVVT 98

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+ S+I +EIG MK  ++I++++ M ++ +  ++S R WA +IS P+L ++   
Sbjct: 99  AMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFILSTRFWACMISGPILALIFAS 158

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            AI+ + I+      I +  F+S   S+ T ++I  G+IK+   A     +A+ +G+   
Sbjct: 159 VAILASFILAEAALGISYGEFWSNIQSSVTASDISNGIIKSIVFAFITAWIALYQGYYCI 218

Query: 337 VHSNSLGKKVTTCVV 351
             SN + K  T  VV
Sbjct: 219 PDSNGIAKATTKTVV 233


>gi|158521034|ref|YP_001528904.1| hypothetical protein Dole_1017 [Desulfococcus oleovorans Hxd3]
 gi|158509860|gb|ABW66827.1| protein of unknown function DUF140 [Desulfococcus oleovorans Hxd3]
          Length = 385

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 102/178 (57%)

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           QL++ G +I+   +++   + EIG ++TA+++AGR+GSA  AEIG+MKI+EE+DA+ +MG
Sbjct: 202 QLTKLGGDIYIPAMITFAMVAEIGPMMTAIVVAGRTGSAYAAEIGTMKISEEVDALISMG 261

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
            D    L  PRI AL++ LP+LT+ +   A++G  +V     ++    +         + 
Sbjct: 262 FDPTLFLAIPRITALVVVLPILTVCSVIFALLGGLVVCVTLLNLQMGPYLEGVSDALFID 321

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           ++   L K+   A  I ++    GF V   + S+G   T+ VV  I  +I+ DS+ A+
Sbjct: 322 DVLWALAKSGIFALLIAVIGCLRGFQVRGGAASVGGAATSAVVTGIFFIILADSVVAL 379


>gi|17231507|ref|NP_488055.1| hypothetical protein alr4015 [Nostoc sp. PCC 7120]
 gi|17133150|dbj|BAB75714.1| alr4015 [Nostoc sp. PCC 7120]
          Length = 263

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 106/202 (52%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
            QM  VG   + + +L +   GAV   Q A +   FGA      ++++   RE+  +LTA
Sbjct: 41  EQMAAVGPDSLFIALLTAVFVGAVFTIQVAREFINFGAGNLVGGVLAVALTRELSPVLTA 100

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           V++AGR GSA  AEIG+M++ E+IDA+  +  D +  L+ PR+ A  + LP+LT+L+  +
Sbjct: 101 VILAGRVGSAFAAEIGTMRVTEQIDAMLMLKTDPIDYLVIPRLLACFLMLPILTLLSLVT 160

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            ++G  I+    Y I   VF     +   + +I + +IKA      I I+    G     
Sbjct: 161 GMLGGLIIATNMYGISDTVFLDSARNLLEIWDICSAMIKACCFGVLIAIIGCSWGLTTTG 220

Query: 338 HSNSLGKKVTTCVVQSISIVII 359
            +  +G+  TT VV ++ I+ +
Sbjct: 221 GAKGVGQSTTTAVVTALLIIFV 242


>gi|37521379|ref|NP_924756.1| hypothetical protein glr1810 [Gloeobacter violaceus PCC 7421]
 gi|35212376|dbj|BAC89751.1| glr1810 [Gloeobacter violaceus PCC 7421]
          Length = 255

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 109/213 (51%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + Q+  VG   V V ++ +   G V   Q A +   FGA      +++I   RE+  +LT
Sbjct: 32  VDQLSVVGTESVLVAVITAITIGMVFTIQVAREFISFGASSAIGGVLAIALTRELAPVLT 91

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV+IAGR GSA  AE+G+M++ E+IDA+  +  D +  L++PR+ A  + LP+LTI+A+ 
Sbjct: 92  AVIIAGRVGSAFAAEVGTMRVTEQIDALEVLRTDPIDYLVTPRVIACAVMLPVLTIVADV 151

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           + + G   +  + Y I   ++     +     ++ +GLIKA      I ++    G    
Sbjct: 152 TGLAGGLFITTQLYGISATLYLDSARNLLESWDMISGLIKAGIFGVLIALIGTNWGLTTT 211

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
             +  +G   T  VV ++  + I++ + +   F
Sbjct: 212 GGARGVGNSTTQSVVTALLTIFIVNFILSALMF 244


>gi|209543397|ref|YP_002275626.1| hypothetical protein Gdia_1228 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209531074|gb|ACI51011.1| protein of unknown function DUF140 [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 383

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 118/221 (53%), Gaps = 3/221 (1%)

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           L+S IR     G S + +V +++F+ GA++A  GA QL +F A+I+   L+ I  +RE+ 
Sbjct: 166 LMSNIRD---AGPSALLIVSVVNFLVGAILAFVGAVQLRKFAADIYVASLVGIAMVREMS 222

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            ++TA+++AGR+G A  A I +M+ NEEIDA+   G+     LI P I  L+ ++P L +
Sbjct: 223 AVMTAIIMAGRTGGAYAARIATMQGNEEIDALTVFGIPVSSYLILPSILGLVATMPFLYL 282

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
                 ++G   V      +  A +F +  +   L     G IK+ F A  IG+ + + G
Sbjct: 283 YGCLIGMLGGFTVAISMLAVTGAGYFHQTINAVGLNQFEFGFIKSIFFAILIGLTSCRIG 342

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
              G  +  +G   T  VV  I  VI +D++FA+    +GI
Sbjct: 343 LRSGRSAADVGVAATRAVVVGIVGVITLDAIFAVIATTLGI 383


>gi|120555619|ref|YP_959970.1| hypothetical protein Maqu_2708 [Marinobacter aquaeolei VT8]
 gi|120325468|gb|ABM19783.1| protein of unknown function DUF140 [Marinobacter aquaeolei VT8]
          Length = 260

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 118/213 (55%), Gaps = 2/213 (0%)

Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209
            GF L L++Q+Y VGV  + +V++     G V+  QG   LS +G+E     ++++  +R
Sbjct: 38  TGFPL-LVKQLYAVGVLSLAIVVVSGLFIGMVLGLQGYTILSDYGSESAIGQMIALTLVR 96

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
           E+G ++TA++ AGR+GSA+ AEIG MK  E++ ++  MG+D +R +++PR+WA  +++P+
Sbjct: 97  ELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSMEMMGVDPLRRVVAPRLWAGFLAMPV 156

Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVA 328
           L ++ +   I G  +V  ++  +    F+    S+     ++  G IK+         +A
Sbjct: 157 LAMIFSVVGIWGGMLVGVEWLGVFEGSFWGNMQSSVDFVDDVLNGFIKSVVFGFVCAWIA 216

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           + +G+     S  +    T  VV S   V+ +D
Sbjct: 217 VYQGYDCVPTSAGISSATTKTVVYSSLAVLGLD 249


>gi|302328064|gb|ADL27265.1| putative ABC transporter, permease protein [Fibrobacter
           succinogenes subsp. succinogenes S85]
          Length = 364

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 146/318 (45%), Gaps = 22/318 (6%)

Query: 57  LIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116
           L+    EK   K+ L+     I+Q    +    RK +  +KPQR    N+   +    G 
Sbjct: 63  LLAELSEKTGNKLVLEHFPPEIKQHLQNL----RKMVPPEKPQRE--TNNILEMMGGAGF 116

Query: 117 KIVKFINDSCSQAHILGLVISN-----TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171
            ++K + +      +L L+ +       G F      F G    + +QM+  G   + + 
Sbjct: 117 SLLKEVFE------VLVLLFTAIYWTIVGPFDKGKIHFGG----ITKQMFKSGSEAMGIC 166

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
            L   +    +A Q +  L+  G   +    +  L   EIG LLT +++AGRSGSA+ AE
Sbjct: 167 FLFVGLICLTMALQSSVMLNAVGGGSYLASGLGFLIFAEIGPLLTTIILAGRSGSAMAAE 226

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           I +M + EE+ A+++M +  V+ L+ PR  AL I+ P+L+  A+        ++ + + D
Sbjct: 227 IANMSVCEEVKALKSMAIPPVQYLVVPRFIALSITTPILSFSASIVGSFAGFLIAYFFCD 286

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
           I F+ +                 IKA      + ++A  +G      + ++GK  T+ VV
Sbjct: 287 ISFSNYMMGLRDGIDPMTFLKSTIKALVFGWIVTLIACNKGLNAHGGAEAVGKATTSSVV 346

Query: 352 QSISIVIIIDSLFA-IFY 368
            +I  ++I D+LFA IFY
Sbjct: 347 AAICTIVISDTLFAFIFY 364


>gi|194324165|ref|ZP_03057939.1| toluene tolerance protein Ttg2B [Francisella tularensis subsp.
           novicida FTE]
 gi|194321612|gb|EDX19096.1| toluene tolerance protein Ttg2B [Francisella tularensis subsp.
           novicida FTE]
          Length = 222

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 112/195 (57%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I Q+  VGV+ + +++      G V++ QG + LS+FGA      ++++  LRE+G ++T
Sbjct: 7   IIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGAHSLLGVMVALSVLRELGPVVT 66

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+ S+I +EIG MK  ++I++++ M ++ +  ++S R WA +IS P+L ++   
Sbjct: 67  AMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFILSTRFWACMISGPILALIFAS 126

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            AI+   I+      I +  F+S   S+ T ++I  G+IK+   A     +A+ +G+   
Sbjct: 127 VAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGIIKSIVFAFITAWIALYQGYYCI 186

Query: 337 VHSNSLGKKVTTCVV 351
             SN + K  T  VV
Sbjct: 187 PDSNGIAKATTKTVV 201


>gi|328675485|gb|AEB28160.1| ABC-type transport system permease protein [Francisella cf.
           novicida 3523]
          Length = 222

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 112/195 (57%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I Q+  VGV+ + +++      G V++ QG + LS+FGA      ++++  LRE+G ++T
Sbjct: 7   IIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGAHSLLGVMVALSVLRELGPVVT 66

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+ S+I +EIG MK  ++I++++ M ++ +  ++S R WA +IS P+L ++   
Sbjct: 67  AMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFILSTRFWACMISGPILALIFAS 126

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            AI+   I+      I +  F+S   S+ T ++I  G+IK+   A     +A+ +G+   
Sbjct: 127 VAILAGFILAEATLGISYGEFWSNIQSSVTASDISNGIIKSIVFAFITAWIALYQGYYCI 186

Query: 337 VHSNSLGKKVTTCVV 351
             SN + K  T  VV
Sbjct: 187 PDSNGIAKATTKTVV 201


>gi|227112741|ref|ZP_03826397.1| hypothetical protein PcarbP_07254 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 260

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 118/219 (53%), Gaps = 7/219 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           L++Q+Y VGV  + ++++     G V+  QG   L+ + AE  S+ +M  L L RE+G +
Sbjct: 44  LVKQLYSVGVQSLLIIMVSGLFIGMVLGLQGYIILTTYSAEA-SLGMMVALSLLRELGPV 102

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +++PR WA +IS+PLL ++ 
Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVVAPRFWAGLISMPLLAVIF 162

Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331
               I G ++  V WK  D  F  F+S          ++   +IK+   A  +  +A+  
Sbjct: 163 VAVGIWGGALVGVDWKGIDSGF--FWSAMQGAVDWRQDVLNCVIKSIVFAITVTWIALFN 220

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 221 GYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|261416607|ref|YP_003250290.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373063|gb|ACX75808.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 354

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 146/318 (45%), Gaps = 22/318 (6%)

Query: 57  LIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116
           L+    EK   K+ L+     I+Q    +    RK +  +KPQR    N+   +    G 
Sbjct: 53  LLAELSEKTGNKLVLEHFPPEIKQHLQNL----RKMVPPEKPQRE--TNNILEMMGGAGF 106

Query: 117 KIVKFINDSCSQAHILGLVISN-----TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171
            ++K + +      +L L+ +       G F      F G    + +QM+  G   + + 
Sbjct: 107 SLLKEVFE------VLVLLFTAIYWTIVGPFDKGKIHFGG----ITKQMFKSGSEAMGIC 156

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
            L   +    +A Q +  L+  G   +    +  L   EIG LLT +++AGRSGSA+ AE
Sbjct: 157 FLFVGLICLTMALQSSVMLNAVGGGSYLASGLGFLIFAEIGPLLTTIILAGRSGSAMAAE 216

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           I +M + EE+ A+++M +  V+ L+ PR  AL I+ P+L+  A+        ++ + + D
Sbjct: 217 IANMSVCEEVKALKSMAIPPVQYLVVPRFIALSITTPILSFSASIVGSFAGFLIAYFFCD 276

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
           I F+ +                 IKA      + ++A  +G      + ++GK  T+ VV
Sbjct: 277 ISFSNYMMGLRDGIDPMTFLKSTIKALVFGWIVTLIACNKGLNAHGGAEAVGKATTSSVV 336

Query: 352 QSISIVIIIDSLFA-IFY 368
            +I  ++I D+LFA IFY
Sbjct: 337 AAICTIVISDTLFAFIFY 354


>gi|118496937|ref|YP_897987.1| ABC-type transport system permease protein [Francisella tularensis
           subsp. novicida U112]
 gi|254372307|ref|ZP_04987798.1| hypothetical protein FTCG_01374 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|118422843|gb|ABK89233.1| ABC-type transport system permease protein [Francisella novicida
           U112]
 gi|151570036|gb|EDN35690.1| hypothetical protein FTCG_01374 [Francisella novicida GA99-3549]
 gi|328676409|gb|AEB27279.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Francisella cf. novicida
           Fx1]
          Length = 254

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 112/195 (57%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I Q+  VGV+ + +++      G V++ QG + LS+FGA      ++++  LRE+G ++T
Sbjct: 39  IIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGAHSLLGVMVALSVLRELGPVVT 98

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+ S+I +EIG MK  ++I++++ M ++ +  ++S R WA +IS P+L ++   
Sbjct: 99  AMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFILSTRFWACMISGPILALIFAS 158

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            AI+   I+      I +  F+S   S+ T ++I  G+IK+   A     +A+ +G+   
Sbjct: 159 VAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGIIKSIVFAFITAWIALYQGYYCI 218

Query: 337 VHSNSLGKKVTTCVV 351
             SN + K  T  VV
Sbjct: 219 PDSNGIAKATTKTVV 233


>gi|121998898|ref|YP_001003685.1| hypothetical protein Hhal_2119 [Halorhodospira halophila SL1]
 gi|121590303|gb|ABM62883.1| protein of unknown function DUF140 [Halorhodospira halophila SL1]
          Length = 258

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 119/215 (55%), Gaps = 1/215 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI Q+Y VGV  + ++++ +   G V+  QG + L+ FGA      ++++  +RE+G ++
Sbjct: 43  LIEQVYAVGVLSLVIILVSALFVGMVLGLQGYYTLADFGATEAVGTMVALSLVRELGPVV 102

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GS++ AE+G MK  E++ ++  M +D  R +++PR +A ++++PLL  + +
Sbjct: 103 TALLFAGRAGSSLTAEVGLMKATEQLSSMEMMAVDPERRILAPRFFAAVLAVPLLAAVFS 162

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              + G  +V      I    F+S   +  T+  +I  G+IK+      +G +A+ +G+ 
Sbjct: 163 AVGVFGGYLVAVGMVGIDSGAFWSNMQNAVTIQDDILNGVIKSVVFGFLVGWIALHKGYM 222

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               S+ + +  T  VV +   V+ +D L     F
Sbjct: 223 AEPTSSGVSRATTLGVVHASLAVLGLDFLLTALMF 257


>gi|254368757|ref|ZP_04984770.1| ABC-type transport system permease protein [Francisella tularensis
           subsp. holarctica FSC022]
 gi|157121678|gb|EDO65848.1| ABC-type transport system permease protein [Francisella tularensis
           subsp. holarctica FSC022]
          Length = 254

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 112/195 (57%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I Q+  VGV+ + +++      G V++ QG + LS+FGA      ++++  LRE+G ++T
Sbjct: 39  IIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGAHSLLGVMVALSVLRELGPVVT 98

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+ S+I +EIG MK  ++I++++ M ++ +  ++S R WA +IS P+L ++   
Sbjct: 99  AMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFILSTRFWACMISGPILALIFAS 158

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            AI+   I+      I +  F+S   S+ T ++I  G+IK+   A     +A+ +G+   
Sbjct: 159 VAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGIIKSIVFAFITAWIALYQGYYCI 218

Query: 337 VHSNSLGKKVTTCVV 351
             SN + K  T  VV
Sbjct: 219 PDSNGIAKATTKTVV 233


>gi|254373781|ref|ZP_04989264.1| hypothetical protein FTDG_01565 [Francisella novicida GA99-3548]
 gi|151571502|gb|EDN37156.1| hypothetical protein FTDG_01565 [Francisella novicida GA99-3548]
          Length = 254

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 112/195 (57%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I Q+  VGV+ + +++      G V++ QG + LS+FGA      ++++  LRE+G ++T
Sbjct: 39  IIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGAHSLLGVMVALSVLRELGPVVT 98

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+ S+I +EIG MK  ++I++++ M ++ +  ++S R WA +IS P+L ++   
Sbjct: 99  AMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFILSTRFWACMISGPILALIFAS 158

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            AI+   I+      I +  F+S   S+ T ++I  G+IK+   A     +A+ +G+   
Sbjct: 159 VAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGIIKSIVFAFITAWIALYQGYYCI 218

Query: 337 VHSNSLGKKVTTCVV 351
             SN + K  T  VV
Sbjct: 219 PDSNGIAKATTKTVV 233


>gi|261819643|ref|YP_003257749.1| hypothetical protein Pecwa_0289 [Pectobacterium wasabiae WPP163]
 gi|261603656|gb|ACX86142.1| protein of unknown function DUF140 [Pectobacterium wasabiae WPP163]
          Length = 260

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 118/219 (53%), Gaps = 7/219 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           L++Q+Y VGV  + ++++     G V+  QG   L+ + AE  S+ +M  L L RE+G +
Sbjct: 44  LVKQLYSVGVQSLLIIMVSGLFIGMVLGLQGYIILTTYSAEA-SLGMMVALSLLRELGPV 102

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +++PR WA +IS+PLL ++ 
Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVVAPRFWAGLISMPLLAVIF 162

Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331
               I G ++  V WK  D  F  F+S          ++   +IK+   A  +  +A+  
Sbjct: 163 VAVGIWGGALVGVDWKGIDSGF--FWSAMQGAVDWRQDVLNCVIKSIVFAITVTWIALFN 220

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 221 GYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|254489694|ref|ZP_05102890.1| conserved hypothetical protein [Methylophaga thiooxidans DMS010]
 gi|224465103|gb|EEF81356.1| conserved hypothetical protein [Methylophaga thiooxydans DMS010]
          Length = 260

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 115/215 (53%), Gaps = 1/215 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           ++Q++ VGV  + ++++     G V+  QG   L  FGAE     L+S+  +RE+G +++
Sbjct: 44  VQQLFSVGVLSILIILISGLFVGMVLGLQGYNTLVDFGAEESLGVLVSLSLVRELGPVVS 103

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+GSA+ AEIG MK  E++  +  M +D +R +I+PR  A II++PLL  + + 
Sbjct: 104 ALLFAGRAGSALTAEIGLMKSTEQLSGMEMMAVDPIRRIIAPRFLAGIIAMPLLAAIFSA 163

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             I+G  +V      +    F+S+  +   L  +I  G+IK+      +  +A+ EG   
Sbjct: 164 VGILGGFLVGHGLLGVDDGAFWSQMQAKTDLYDDILNGVIKSVVFGFVVTWIALFEGHDA 223

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
              S  +G+  T  VV S   ++ +D +     F 
Sbjct: 224 TPTSEGVGRATTRTVVHSAFAILGLDFVLTALMFG 258


>gi|268590740|ref|ZP_06124961.1| toluene tolerance ABC efflux transporter, permease [Providencia
           rettgeri DSM 1131]
 gi|291313512|gb|EFE53965.1| toluene tolerance ABC efflux transporter, permease [Providencia
           rettgeri DSM 1131]
          Length = 260

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 120/219 (54%), Gaps = 7/219 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           L++Q+Y +GV  + ++ +     G V+  QG   L+ F AE  S+ +M  L L RE+G +
Sbjct: 44  LMKQLYAIGVQSLLIIAVSGLFIGMVLGLQGYLVLTTFSAEA-SLGMMVALSLLRELGPV 102

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGR+GSA+ AEIG MK  E+I ++  M +D +R +I+PR WA  IS+PLL+++ 
Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLRRVIAPRFWAGFISMPLLSLIF 162

Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKE 331
               I+G ++  V WK  D  F  F++   S+     ++   +IK+   A  +  +A+  
Sbjct: 163 VAVGILGGALVGVDWKGIDEGF--FWASMQSSVDWRLDLVNCVIKSLVFAITVTWIALFN 220

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G+     S  + +  T  VV +   V+ +D +     F 
Sbjct: 221 GYDAIPTSEGISQATTRTVVHASLSVLGLDFVLTALMFG 259


>gi|218961384|ref|YP_001741159.1| hypothetical protein CLOAM1090 [Candidatus Cloacamonas
           acidaminovorans]
 gi|167730041|emb|CAO80953.1| conserved hypothetical protein; putative membrane protein
           [Candidatus Cloacamonas acidaminovorans]
          Length = 263

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 120/227 (52%), Gaps = 12/227 (5%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL- 206
           +++ FL+   R    +G   + +++L +  TG V A Q  +Q   +      ++L+S+L 
Sbjct: 43  RYQEFLIQFKR----IGFDSLFLILLTAAFTGLVTALQAVYQSKGY----VPVNLLSVLI 94

Query: 207 ---QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263
               + E+  +LTA+++ G+ G++I AEIG+M+++E+IDA+ +M +D    L  PRI A 
Sbjct: 95  GKSTMIELAPVLTALVLTGKVGASIAAEIGTMRVSEQIDALESMNIDPYEFLYMPRILAG 154

Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323
           +++ PL+T+ AN   II A    W  Y I +  FF+   S    ++++ GL K+      
Sbjct: 155 VLAFPLVTVFANAVGIICAWYFSWLRYGIHYYTFFNNMRSYFIPSDLWGGLAKSFVFGFI 214

Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           I   A   G      +  +GK  T+ VV S   ++++D + A F F 
Sbjct: 215 ITSFACYHGDRCFGGAEGVGKATTSTVVYSSVAILVMDFIVAWFLFG 261


>gi|146302050|ref|YP_001196641.1| hypothetical protein Fjoh_4314 [Flavobacterium johnsoniae UW101]
 gi|146156468|gb|ABQ07322.1| protein of unknown function DUF140 [Flavobacterium johnsoniae
           UW101]
          Length = 252

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 112/217 (51%), Gaps = 4/217 (1%)

Query: 145 SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204
             Y+ K FL    +Q Y +G   +P+V +  F+ G V+  Q    L  FGAE +   +++
Sbjct: 29  PPYETKEFL----KQCYLIGYKSLPLVAITGFIMGLVLTIQSRPTLVTFGAESWLPGMVA 84

Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264
           +  +REI  ++TA++ AG+  S I AE+GSMK+ E+IDA+    ++    L+  RI A  
Sbjct: 85  LSLIREIAPVITALICAGKISSGIGAELGSMKVTEQIDAMEVSAINPYNYLVVTRILACT 144

Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI 324
           + +P+L I A+   IIG    I  + D+ F  + ++   +   +++    IK  F    I
Sbjct: 145 LMVPILVIFADAVGIIGGYAGINIHGDVNFYRYLTQIIQSLEFSDLIPATIKTFFFGYFI 204

Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           G++   +GF     + S+G    + VV +   + IID
Sbjct: 205 GMIGCYKGFNAANGTESVGHAANSAVVTASLSIFIID 241


>gi|251791365|ref|YP_003006086.1| hypothetical protein Dd1591_3807 [Dickeya zeae Ech1591]
 gi|247539986|gb|ACT08607.1| protein of unknown function DUF140 [Dickeya zeae Ech1591]
          Length = 260

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 121/219 (55%), Gaps = 7/219 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           L +Q+Y VGV  + ++++     G V+  QG   L+ + AE  S+ +M  L L RE+G +
Sbjct: 44  LRKQLYSVGVQSLLIIMVSGVFIGMVLGLQGYLVLTTYSAEA-SLGMMVALSLLRELGPV 102

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +++PR WA +I++PLLT++ 
Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVVAPRFWAGVITMPLLTVIF 162

Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRF-HSTATLANIFTGLIKAPFMACAIGIVAMKE 331
               I G ++  V WK  D  F  F+S   ++ A   ++   ++K+   A  +  +A+  
Sbjct: 163 VAVGIWGGALVGVDWKGIDSGF--FWSAMQNAVAWQKDLLNCVLKSLVFAITVTWIALFN 220

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 221 GYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259


>gi|292490486|ref|YP_003525925.1| hypothetical protein Nhal_0342 [Nitrosococcus halophilus Nc4]
 gi|291579081|gb|ADE13538.1| protein of unknown function DUF140 [Nitrosococcus halophilus Nc4]
          Length = 260

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 113/216 (52%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI QMY VGV  +P++++     G V+  QG   L  FGAE     ++S+  +RE+G ++
Sbjct: 43  LIAQMYSVGVLTLPIIVVSGAFVGMVLGLQGYNTLVDFGAEESLGVIVSLSLVRELGPVV 102

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           +A++ AGR+GSA+ AEIG MK  E++  +  M +D +R + +PR +A   S+PLL  + +
Sbjct: 103 SALLFAGRAGSALTAEIGLMKATEQLSGMEMMAVDPMRRVAAPRFFAGCFSMPLLAAIFS 162

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHS-TATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
              ++G   V      +    F+S+  + T    +I  G+IK+      +  +A+ EG+ 
Sbjct: 163 AVGVLGGYFVGVGLLGVDEGAFWSQMQANTDWEEDILNGVIKSLVFGLVVTWIAVFEGYD 222

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV S   V+ +D +     F 
Sbjct: 223 TAPTSEGVARATTRTVVHSAFAVLALDFVLTALMFG 258


>gi|119946509|ref|YP_944189.1| ABC-type transporter inner membrane protein [Psychromonas
           ingrahamii 37]
 gi|119865113|gb|ABM04590.1| ABC-type transporter inner membrane protein [Psychromonas
           ingrahamii 37]
          Length = 234

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 120/215 (55%), Gaps = 1/215 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I Q++ +G+  +P+++      G V++ QG   L  + AE     ++++  LRE+G ++T
Sbjct: 19  IGQIFQLGILSLPIILTAGLFIGMVLSLQGYNVLVDYAAEESLGSMVALSLLRELGPVVT 78

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+GSA+ AEIG M+  E+I ++  M +  ++ +I+PR  A I++LPLLT++ N 
Sbjct: 79  ALLFAGRAGSALTAEIGLMQSTEQIASMEMMAVSPLKRVIAPRFLAGIVTLPLLTLMFNV 138

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFH-STATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
            AI G  ++   +  +    ++S    S   L ++  G+IK+      I  VA+  G+ V
Sbjct: 139 VAIWGGYLIGVSWMGVDGGAYWSVMQGSVDYLPDVMNGVIKSIVFGVMITWVALYNGYYV 198

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             ++  + +  T  VV S  +V+ +D +  +F F 
Sbjct: 199 MPNAIGISRSTTQTVVVSSLLVLAMDFILTVFMFG 233


>gi|208780390|ref|ZP_03247731.1| toluene tolerance protein Ttg2B [Francisella novicida FTG]
 gi|208743758|gb|EDZ90061.1| toluene tolerance protein Ttg2B [Francisella novicida FTG]
          Length = 241

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 112/195 (57%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I Q+  VGV+ + +++      G V++ QG + LS+FGA      ++++  LRE+G ++T
Sbjct: 26  IIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGAHSLLGVMVALSVLRELGPVVT 85

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+ S+I +EIG MK  ++I++++ M ++ +  ++S R WA +IS P+L ++   
Sbjct: 86  AMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFILSTRFWACMISGPILALIFAS 145

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            AI+   I+      I +  F+S   S+ T ++I  G+IK+   A     +A+ +G+   
Sbjct: 146 VAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGIIKSIVFAFITAWIALYQGYYCI 205

Query: 337 VHSNSLGKKVTTCVV 351
             SN + K  T  VV
Sbjct: 206 PDSNGIAKATTKTVV 220


>gi|239787370|emb|CAX83846.1| ABC transporter permease protein [uncultured bacterium]
          Length = 168

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/163 (37%), Positives = 101/163 (61%)

Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
           M++  +RE   L+T +++AGRSGSA+ A +G+M+IN+EIDA+  MG+D VR L++P + A
Sbjct: 1   MALSVVREFAPLITGIVVAGRSGSALAARLGTMRINQEIDALHVMGIDPVRFLVAPALLA 60

Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322
           +++ LPLLT+LA+F A+ GA + I     + F  ++ R      + ++  GL K+   A 
Sbjct: 61  MLVVLPLLTLLADFVALTGAGMYICMDLGMDFPAYWERVIEALKVDDLGHGLGKSVIFAV 120

Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            + +V +  G  V   +  +GK  T  VV +IS +++ D LFA
Sbjct: 121 LVTLVGVVNGSLVQGGAEGVGKATTRSVVHAISAIVVTDMLFA 163


>gi|186472351|ref|YP_001859693.1| hypothetical protein Bphy_3498 [Burkholderia phymatum STM815]
 gi|184194683|gb|ACC72647.1| protein of unknown function DUF140 [Burkholderia phymatum STM815]
          Length = 382

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 123/241 (51%), Gaps = 2/241 (0%)

Query: 135 VISNTGEFCASSY--KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           ++  T   C +++  + +   + +++ M   G   + +V +++ + GA++A  GA Q  +
Sbjct: 142 LVGETALHCTAAFAHRVRTRGVDVLQLMREAGAGALAIVAIVNGLVGAILAFIGAVQFQR 201

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
           FGA I+  +L+ I  +RE+  L TA+++AGR+G A  A + +M+ NEEIDA+  +G+   
Sbjct: 202 FGAGIYVANLVGIAVVREMAALATAIVMAGRTGGAYAAHLATMQGNEEIDALNAVGIPVF 261

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
             L+ PR+ AL+  +PLL + +    ++   IV     DI    +  +            
Sbjct: 262 DFLVLPRVIALVSMMPLLYVYSCAVGLLSGFIVTLATLDITAVTYLQQLRGAVDGVQFAI 321

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           GL K+      + +     G   G  +  +G+  T+ VV  I  VI +D++FA+   A+G
Sbjct: 322 GLAKSIAFGSFVALAGCHIGLKAGRSAAEVGRAATSAVVVGIVGVISLDAIFAVCTNALG 381

Query: 373 I 373
           I
Sbjct: 382 I 382


>gi|227825164|ref|ZP_03989996.1| membrane protein [Acidaminococcus sp. D21]
 gi|226905663|gb|EEH91581.1| membrane protein [Acidaminococcus sp. D21]
          Length = 260

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 112/217 (51%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           ++RQM  +G   +P+V + S  TG V++ Q A +  +FGA      +++I   RE+  +L
Sbjct: 43  VLRQMAKLGADSLPIVSMTSMCTGMVLSVQTAKEFVRFGAADSVGGIVAIAMARELAPIL 102

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
             V++AGR G+AI AEIG+MK+ E+IDA+R M     + L++PR  A+++ +P+L I AN
Sbjct: 103 AGVVVAGRIGAAIAAEIGTMKVTEQIDALRVMATSPTQYLVAPRFLAIVLMMPILVIYAN 162

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
               IG   V   Y  I   +F           ++  GLIK       I ++   +G   
Sbjct: 163 LVGDIGGGFVAMNYAGIGSHMFIESIRGFVESWDLVGGLIKGSVFGAIIAVIGCHKGLNA 222

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
              +  +GK  T  VV SI ++ I +   ++  +  G
Sbjct: 223 QQGAEGVGKATTASVVLSIILIFIFNYFLSVMLYVHG 259


>gi|37527885|ref|NP_931230.1| hypothetical protein plu4033 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36787321|emb|CAE16405.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 260

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 116/218 (53%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L +Q+Y VGV  + ++I+     G V+  QG   L+ + AE     +++I  LRE+G ++
Sbjct: 44  LRQQLYSVGVRSLLIIIVSGLFIGMVLGLQGYLILTTYSAEASLGMMVAISLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E+I ++  M +D +R +I+PR WA  IS+PLL+++  
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLRRVIAPRFWAGFISMPLLSLIFV 163

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
              I G ++  V WK  D  F  F+S   S      ++    IK+   A  +  +A+  G
Sbjct: 164 AVGIWGGAMVGVDWKGIDSGF--FWSSMQSAIEWQKDLLNCFIKSVVFAITVTWIALFNG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     S  + +  T  VV +   V+ +D +     F 
Sbjct: 222 YDAIPTSEGISRATTRTVVHASLAVLGLDFVLTALMFG 259


>gi|187931162|ref|YP_001891146.1| ABC-type transport system permease protein [Francisella tularensis
           subsp. mediasiatica FSC147]
 gi|187712071|gb|ACD30368.1| ABC-type transport system permease protein [Francisella tularensis
           subsp. mediasiatica FSC147]
          Length = 254

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 111/195 (56%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I Q+  VGV+ + +++      G V++ QG + LS+FGA      ++++  LRE+G ++T
Sbjct: 39  IIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGAHSLLGVMVALSVLRELGPVVT 98

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+ S+I +EIG MK  ++I++ + M ++ +  ++S R WA +IS P+L ++   
Sbjct: 99  AMLFAGRACSSITSEIGLMKATDQINSFKVMNVNPISFILSTRFWACMISGPILALIFAS 158

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            AI+   I+      I +  F+S   S+ T ++I  G+IK+   A     +A+ +G+   
Sbjct: 159 VAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGIIKSIVFAFITAWIALYQGYYCI 218

Query: 337 VHSNSLGKKVTTCVV 351
             SN + K  T  VV
Sbjct: 219 PDSNGIAKATTKTVV 233


>gi|312890492|ref|ZP_07750028.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM
           18603]
 gi|311296950|gb|EFQ74083.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM
           18603]
          Length = 257

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 110/206 (53%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
            +RQ Y +G   + +V + SF+ G V+  Q    L +FGA      ++ +  +REIG ++
Sbjct: 40  FVRQCYEIGYRSITLVGITSFIMGVVLTLQSRPTLVKFGASSMLPFMVCVSIIREIGPVI 99

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AG+  S I AE+GSMK+ E+IDA+   G + ++ L+  RI A  I +P+LT++ +
Sbjct: 100 TAIICAGKISSGIGAELGSMKVTEQIDAMEVSGANPMQYLVVTRILATTIMIPILTLMGD 159

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              + G  + +       + ++F++  S+   +++   +IK  F   A+G +   +GF  
Sbjct: 160 VLGLFGGFLAVHFADHTSWQLYFNKCVSSVDFSDLLPAVIKTVFFGFAVGFIGCYKGFNS 219

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361
              + S+G    + VV +   +  +D
Sbjct: 220 NRGTESVGIAANSAVVSASLWIFFLD 245


>gi|258645550|ref|ZP_05733019.1| toluene tolerance ABC efflux transporter, permease [Dialister
           invisus DSM 15470]
 gi|260402906|gb|EEW96453.1| toluene tolerance ABC efflux transporter, permease [Dialister
           invisus DSM 15470]
          Length = 253

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 111/213 (52%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I+Q   +GV   P+V L    TG V++ Q A +L+++GA      +++I   RE+G +L 
Sbjct: 41  IKQCLDLGVLSFPIVALTLLFTGMVLSVQIAGELTKYGAGFTVGAIVAIGMGRELGPVLC 100

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
            V++AGR G+AI AEIG+M++ E+IDA+R M +  V  L+ PR+ + +  LP+LT+    
Sbjct: 101 GVVLAGRVGAAITAEIGTMRVTEQIDALRCMAVSPVGYLVLPRLLSCMAMLPILTVFGVS 160

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
             + G  IV    + +   VF          ++++ G++K+      + +V    G    
Sbjct: 161 IGVFGGMIVASLTHGVSSYVFIHSIEVFCIPSDLYIGVMKSVVFGMIVALVGCDRGMTCE 220

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
             +  +G+  T  VV SI ++   + L +   F
Sbjct: 221 AGAEGVGRATTQSVVYSIIMIFAANYLLSSILF 253


>gi|262280246|ref|ZP_06058030.1| toluene tolerance efflux transporter [Acinetobacter calcoaceticus
           RUH2202]
 gi|262258024|gb|EEY76758.1| toluene tolerance efflux transporter [Acinetobacter calcoaceticus
           RUH2202]
          Length = 258

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 113/209 (54%), Gaps = 1/209 (0%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
           S+   G     I QM+ VGV  + ++ +     G V+  QG   L   G+E     ++S+
Sbjct: 31  SFPTTGGFGRFIYQMHRVGVMSLLIITVSGLFIGLVLGLQGYSILVNIGSESMLGTMVSL 90

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
             LRE+  ++ A++ AGR+GSA+ AEIGSMK +E++ ++  +G+D ++ ++SPR+WA ++
Sbjct: 91  TLLRELAPVVAALLFAGRAGSALTAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGVV 150

Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAI 324
           SLP+LT++     I+G  +V   +  +    F+S   +      ++  G+IK+   A   
Sbjct: 151 SLPMLTVIFAAIGIVGGKMVGVDFLGVDEGSFWSGMQNNVQFGHDVVNGIIKSIVFALLC 210

Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
             +A+ +G+A       +   +T  VV S
Sbjct: 211 TWIAVYQGYACDPTPEGIATAMTRTVVYS 239


>gi|293610802|ref|ZP_06693102.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827146|gb|EFF85511.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325123627|gb|ADY83150.1| toluene tolerance efflux transporter (ABC superfamily, membrane)
           [Acinetobacter calcoaceticus PHEA-2]
          Length = 258

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 113/209 (54%), Gaps = 1/209 (0%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
           S+   G     I QM+ VGV  + ++ +     G V+  QG   L   G+E     ++S+
Sbjct: 31  SFPSSGGFGRFIYQMHRVGVMSLLIITVSGLFIGLVLGLQGYSILVNVGSESMLGTMVSL 90

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
             LRE+  ++ A++ AGR+GSA+ AEIGSMK +E++ ++  +G+D ++ ++SPR+WA ++
Sbjct: 91  TLLRELAPVVAALLFAGRAGSALTAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGVV 150

Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAI 324
           SLP+LT++     I+G  +V   +  +    F+S   +      ++  G+IK+   A   
Sbjct: 151 SLPMLTVIFAAIGIVGGKMVGVDFLGVDEGSFWSGMQNNVQFGHDVVNGIIKSIVFALLC 210

Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
             +A+ +G+A       +   +T  VV S
Sbjct: 211 TWIAVYQGYACDPTPEGIATAMTRTVVYS 239


>gi|304413072|ref|ZP_07394545.1| permease component of phospholipid ABC transporter [Candidatus
           Regiella insecticola LSR1]
 gi|304283915|gb|EFL92308.1| permease component of phospholipid ABC transporter [Candidatus
           Regiella insecticola LSR1]
          Length = 260

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 117/219 (53%), Gaps = 7/219 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           L++Q++ +G   + ++++     G V+  QG   L  + AE  S+ +M  L L RE+G +
Sbjct: 44  LVKQLHNLGTQSLSIIVVSGLFIGMVLGLQGYLILMTYSAEA-SLGMMVALSLLRELGPV 102

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+PLL  + 
Sbjct: 103 ITALLFAGRAGSALTAEIGLMKATEQLASLEMMAIDPLRRVIAPRFWAGVISMPLLMAIF 162

Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331
               I+G +I  V WK  D  F  F+S   +      ++   LIK+     A+  +A+  
Sbjct: 163 IAVGIVGGAIVGVDWKGIDAGF--FWSAMQNAIEWRVDLINSLIKSLVFTVAVTWIALFN 220

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 221 GYDALPTSEGISQATTRTVVYSSLAVLGLDFVLTTLMFG 259


>gi|256424262|ref|YP_003124915.1| hypothetical protein Cpin_5283 [Chitinophaga pinensis DSM 2588]
 gi|256039170|gb|ACU62714.1| protein of unknown function DUF140 [Chitinophaga pinensis DSM 2588]
          Length = 264

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 110/212 (51%), Gaps = 1/212 (0%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
            +IRQ Y VG   + ++ +  F+TG V  +Q    LS+FGA  +   L++I  +R +  L
Sbjct: 47  EVIRQCYQVGYKSLALITMTGFITGLVFTKQSRPSLSEFGATSWLPSLIAIAVIRALAPL 106

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AG+ GS+I AE+ SM++ E+IDA+    ++  + L++ R+ A  IS+P+L    
Sbjct: 107 VTALICAGKVGSSIGAELASMRVTEQIDAMEVSAINPFKFLVTTRVMATTISIPILVGYT 166

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
               ++G+ + I       F  FF          +  T  +KA      IG+V+  +G+ 
Sbjct: 167 GLVGLLGSFLDIHLNEQTSFTSFFQEAFKNIYFLDFITTGVKAVVFGFTIGVVSCYQGYH 226

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
               +  +GK     VV S+  +I I+ +F +
Sbjct: 227 ATQGTQGVGKAANISVVISM-FLIFIEEIFIV 257


>gi|145588286|ref|YP_001154883.1| hypothetical protein Pnuc_0097 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145046692|gb|ABP33319.1| protein of unknown function DUF140 [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 265

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 122/227 (53%), Gaps = 7/227 (3%)

Query: 150 KGFLLS----LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
            GFLL     +I Q+ +VG     ++ +     G V+  QG + L+++G+E  ++ L+  
Sbjct: 39  SGFLLKRPRLVIDQILFVGNHSFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQ-ALGLLVA 97

Query: 206 LQL-REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264
           L L RE+G ++TA++ AGR+G+++ AEIG MK  E++ A+  M +D +  +I+PR+WA I
Sbjct: 98  LSLTRELGPVITALLFAGRAGTSLTAEIGLMKAGEQLSAMEMMAVDPLGRVIAPRLWAGI 157

Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACA 323
           IS+P+L  +     ++G  +V      +    F+S+      L ++I  GLIK+     A
Sbjct: 158 ISMPILATIFTAVGVLGGYLVGVPLIGVDSGAFWSQMQGGVDLFSDIGNGLIKSLVFGVA 217

Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  +A+ +G+        + +  T  VV S   V+ +D L     F+
Sbjct: 218 VTFIALYQGYEAKPTPEGVSQATTRTVVISSLSVLALDFLLTAMMFS 264


>gi|53803964|ref|YP_114401.1| hypothetical protein MCA1968 [Methylococcus capsulatus str. Bath]
 gi|53757725|gb|AAU92016.1| conserved hypothetical protein TIGR00056 [Methylococcus capsulatus
           str. Bath]
          Length = 263

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 113/217 (52%), Gaps = 3/217 (1%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           LI QMY VGV  + ++++     G V+  QG + LS FGAE  S+ +M    L RE+G +
Sbjct: 46  LIVQMYSVGVLSILLIMISGLFVGMVLGLQGYYVLSDFGAE-ESLGVMVAASLVRELGPV 104

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGR+GSA+ AEIG MK  E++  +  M +D V+ +I+PR +A ++S+PLL  L 
Sbjct: 105 VTALLFAGRAGSALTAEIGLMKATEQLSGMEMMAVDPVKRIIAPRYFAGVVSMPLLAALF 164

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGF 333
           +   ++G   V      +    F S+  +      +I  G IK+      +  +A+ EG+
Sbjct: 165 SIIGVLGGYFVGVGLLGVDEGAFRSQMQAKIDFDEDIVNGFIKSLVFGAVVTWIAVFEGY 224

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                S  + +  T  VV S   V+  D +     F 
Sbjct: 225 DATPTSEGVSRATTRSVVYSAFAVLGCDFVLTALMFG 261


>gi|126657935|ref|ZP_01729088.1| hypothetical protein CY0110_13761 [Cyanothece sp. CCY0110]
 gi|126620875|gb|EAZ91591.1| hypothetical protein CY0110_13761 [Cyanothece sp. CCY0110]
          Length = 263

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 107/205 (52%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + QM  VG   + + ++ +   G V   Q A +   FGA      ++++   RE+  +LT
Sbjct: 43  LEQMSVVGPESLTIALITAGFVGMVFTIQVAREFISFGAASTVGGVLALALTRELAPVLT 102

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV++AGR GSA  AEIG+M++ E+IDA+  +  D +  L+ PR+ A  + LP+L IL+  
Sbjct: 103 AVVVAGRVGSAFAAEIGTMRVTEQIDALYMLKTDPIDYLVLPRVLACCLMLPVLNILSLL 162

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           + + G  ++    YDI   VF +   +   L ++ T +IK+      I ++    G    
Sbjct: 163 TGMTGGLLIANGLYDISPYVFLTSIRNFLELWDLVTSVIKSIAFGGLIAVIGCSWGLTTT 222

Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361
             +  +G+  TT VV S+  V +I+
Sbjct: 223 GGAKGVGQSTTTAVVTSLLAVFVIN 247


>gi|308051140|ref|YP_003914706.1| hypothetical protein Fbal_3434 [Ferrimonas balearica DSM 9799]
 gi|307633330|gb|ADN77632.1| protein of unknown function DUF140 [Ferrimonas balearica DSM 9799]
          Length = 260

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 115/207 (55%), Gaps = 1/207 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q+Y VGV  + ++++     G V+  QG   L  FG E     ++++  LRE+G ++
Sbjct: 44  LIKQLYQVGVLSMVIILVSGLFIGMVLGLQGYIILVDFGTEESLGPMVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D ++ +I+PR WA +IS+PLL ++  
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLASMEMMAVDPLQRVIAPRFWAGVISMPLLALMFT 163

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G  +V  ++  I    F+S   ++     +I   LIK+   A  +  +A+ +G+ 
Sbjct: 164 TIGIWGGHLVGVEWKGIDPGAFWSILTASVEWQKDILNCLIKSVVFAFVVTWIALFKGYD 223

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIID 361
               +  + +  T  VV +   V+ +D
Sbjct: 224 AVPTAEGISRATTETVVHASLAVLALD 250


>gi|260886513|ref|ZP_05897776.1| toluene tolerance ABC efflux transporter, permease [Selenomonas
           sputigena ATCC 35185]
 gi|330839644|ref|YP_004414224.1| protein of unknown function DUF140 [Selenomonas sputigena ATCC
           35185]
 gi|260863656|gb|EEX78156.1| toluene tolerance ABC efflux transporter, permease [Selenomonas
           sputigena ATCC 35185]
 gi|329747408|gb|AEC00765.1| protein of unknown function DUF140 [Selenomonas sputigena ATCC
           35185]
          Length = 256

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 102/203 (50%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           QM ++GV    +V L    TG V+  Q A +  +FGA+     +++I   RE+G +L  V
Sbjct: 46  QMSHLGVDSFAIVSLTMLFTGMVMTLQVAHEFIRFGAQSTIGGVIAIAIGRELGPVLVGV 105

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           + AGR GSAI AEI +MK+ E+IDA+R M    +  L+ PR+ A +  +PLLTI  +   
Sbjct: 106 VCAGRVGSAITAEISTMKVTEQIDALRVMATSPIGYLVVPRMIACMCMVPLLTIFGDVIG 165

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           + G   V   Y  I    F +  H  A   ++  GLIKA      I ++    G      
Sbjct: 166 VFGGWFVAVHYAGIASYTFTNSIHVFAVPHDVTGGLIKAAVFGIVIAVLGAWYGLHAPEG 225

Query: 339 SNSLGKKVTTCVVQSISIVIIID 361
           +  +G+  T  VV +I  +  ++
Sbjct: 226 AEGVGRATTKSVVAAIVCIFFLN 248


>gi|189500799|ref|YP_001960269.1| hypothetical protein Cphamn1_1871 [Chlorobium phaeobacteroides BS1]
 gi|189496240|gb|ACE04788.1| protein of unknown function DUF140 [Chlorobium phaeobacteroides
           BS1]
          Length = 264

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 110/212 (51%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           K + +    + Q    G   +P+V++ S   GA++A +    L  FGA+       ++  
Sbjct: 40  KIRRYWRDFLDQAKIAGADSLPIVLVSSIAIGALLAVEVGNLLEDFGAKTMLGRSTALSV 99

Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267
           +RE+G L+  +M++ R GS   AE+G+MKI+E+IDA+R  G D V  L+ PR+ A +I  
Sbjct: 100 IRELGPLIMGLMLSARYGSRNGAELGAMKISEQIDALRAFGTDPVAKLVMPRLVAALIMF 159

Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327
             LT +A+FS +  A+++   Y+ I   +F++         +   G +KAP  A  I +V
Sbjct: 160 IPLTAIADFSGLYSAALLAEHYHKIDPGIFWNAVFPRLVFKDFVVGFLKAPVFAIIITLV 219

Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           +   GF     +  +G+     +V S  ++++
Sbjct: 220 SCFNGFIAQGGTAGVGRSTIKGIVVSSGLILV 251


>gi|323140905|ref|ZP_08075818.1| hypothetical protein HMPREF9443_00583 [Phascolarctobacterium sp.
           YIT 12067]
 gi|322414643|gb|EFY05449.1| hypothetical protein HMPREF9443_00583 [Phascolarctobacterium sp.
           YIT 12067]
          Length = 283

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 115/215 (53%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
            ++RQM  +G   +P+V++    TG V + Q A +  + GA      +++I   RE+  +
Sbjct: 68  EVVRQMALLGADSLPIVMMTILCTGMVFSVQTAKEFVRLGASSSVGGIVAIAMARELVPV 127

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           LT V++AGR G+AI AE+G+MK+ E+IDA+R M  + V  L+ PR  AL++ +P+L + A
Sbjct: 128 LTGVVVAGRIGAAIAAELGTMKVTEQIDALRVMAANPVSYLVVPRFIALVLMMPVLVVFA 187

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
           NF   IG  +V   Y  I    + +   + A   ++F G++K+      I IV   +G  
Sbjct: 188 NFIGNIGGWVVAHYYAGIGSFTYENSIRTLAEFYDVFGGMVKSCVFGAIIAIVGCYKGLN 247

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               +  +G   T  VV SI +V I +   +I  +
Sbjct: 248 APNGAEGVGLATTASVVLSIILVFITNYFLSIVLY 282


>gi|119493784|ref|ZP_01624353.1| hypothetical protein L8106_03769 [Lyngbya sp. PCC 8106]
 gi|119452479|gb|EAW33666.1| hypothetical protein L8106_03769 [Lyngbya sp. PCC 8106]
          Length = 259

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 8/209 (3%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ----FGAEIFSIDLMSILQLREIG 212
           + QM  VG    P  +LI+ +T   +      Q+S+     GA   +  ++++   RE+ 
Sbjct: 39  LEQMAAVG----PESLLIALITAGFVGMVFTIQVSREFITLGAGNLAGGVLALSLARELS 94

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            +LTAV+I GR GSA  AEIG+M++ E+IDA+  +  D V  L+ PR+ A  + LPLL I
Sbjct: 95  PVLTAVIITGRVGSAFAAEIGTMQVTEQIDALYVLKTDPVDYLVIPRVIACCLMLPLLNI 154

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           +   + + G  ++    Y+IP  +F     +  TL ++ +G IKA      I +++   G
Sbjct: 155 ICLMTGLAGGLLISSSLYNIPPNMFLESVQNFLTLWDLVSGEIKALIFGGTIAVISTNWG 214

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                 +  +G+  TT VV  +  + I+D
Sbjct: 215 LTTTGGAKGVGQSTTTAVVTCLLSIFILD 243


>gi|289523217|ref|ZP_06440071.1| STAS domain protein [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289503760|gb|EFD24924.1| STAS domain protein [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 259

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 117/218 (53%), Gaps = 1/218 (0%)

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           L S+  QM  VGV  V +V +IS  TG V+A Q   Q  +FGA  +   ++++  +RE+ 
Sbjct: 40  LRSVTDQMERVGVQSVFMVSVISAFTGMVMAVQTLDQFLKFGASGYIGGVIALSMIREMS 99

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            +LT +++AGR GS++ AEIG+MK+ E++DA+R  GLD    +  PRI A ++ +P+LTI
Sbjct: 100 PVLTGIVVAGRVGSSMAAEIGTMKVTEQLDALRAFGLDEYVFVGVPRILASLVMVPILTI 159

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
            +      G  + +  +  I   +F         + +I  GL+K+      I IVA   G
Sbjct: 160 FSMTVGTFGGYLYV-AFRGIHPLIFKDSITLLVNVYDINGGLLKSLVYGFVISIVACACG 218

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           F     +  +G+  T  VV S  +++I++ + +   F 
Sbjct: 219 FRAEGGAKGVGETTTLAVVWSNMLILILNYMLSTLLFG 256


>gi|171915264|ref|ZP_02930734.1| hypothetical protein VspiD_28855 [Verrucomicrobium spinosum DSM
           4136]
          Length = 264

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 112/218 (51%), Gaps = 3/218 (1%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q+  +G     VVI+    TGAV   Q  F+   FG E     ++S+   RE+G +L  
Sbjct: 44  QQIVSIGYGSQVVVIVTGAFTGAVFTAQTYFKFKDFGVETGVGAIVSVAMCRELGPVLAG 103

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +M+ GR G+A+ AEIG+MK+ E+IDA+R +G+  V  L+ PR +A++IS+PLL   +   
Sbjct: 104 LMVTGRVGAAMAAEIGTMKVTEQIDALRALGVHPVDYLMLPRFFAMLISMPLLIAESITF 163

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            +  +  V+   + +P A F+          +I  G+IK       I +++  +G     
Sbjct: 164 GLAASYCVVVFGFGVPSAWFWQHVVEHTNEEDIIYGMIKGLIFGILITVISCHQGLTASD 223

Query: 338 HSNSLGKKVTTCVVQSISIVIIID---SLFAIFYFAIG 372
            +  +G   T  VV S   ++I +   SL   ++F +G
Sbjct: 224 GAVGVGIGTTRAVVYSSLALLICNFFLSLLLNYFFPLG 261


>gi|296125262|ref|YP_003632514.1| hypothetical protein Bmur_0208 [Brachyspira murdochii DSM 12563]
 gi|296017078|gb|ADG70315.1| protein of unknown function DUF140 [Brachyspira murdochii DSM
           12563]
          Length = 268

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 118/220 (53%), Gaps = 8/220 (3%)

Query: 145 SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF--GAEIFSIDL 202
           SS+ FK     L  Q+  +GV    V  +    TG V++ Q A  L     G   F   +
Sbjct: 42  SSFSFK----LLKEQIIRMGVDSFVVAAVTVLCTGMVMSLQIAVVLDSVLKGISQFVGSM 97

Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
           +    ++E+  +L A++ AGR GS++ AEIG+M+++E++DA++T+  + +  +  PR WA
Sbjct: 98  VGKAMVKELSPMLLALIFAGRVGSSVTAEIGTMQVSEQLDALKTLYTNPIEYVAVPRFWA 157

Query: 263 LIISLPLLTILANFSAIIGASIV-IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMA 321
            +ISLP+LT+ AN   ++G +IV ++  +  P   +F R  +  ++ +    LIK+    
Sbjct: 158 AVISLPMLTVSANIIGVVGGAIVTVFVLHSDPMH-YFDRAIAVISVGDFIGSLIKSTIFG 216

Query: 322 CAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
             + I++   GF     +  +GK  TT VV S  I++I D
Sbjct: 217 AEVIIISCFYGFRTSGGAEGVGKATTTSVVYSFMIILITD 256


>gi|291613160|ref|YP_003523317.1| hypothetical protein Slit_0691 [Sideroxydans lithotrophicus ES-1]
 gi|291583272|gb|ADE10930.1| protein of unknown function DUF140 [Sideroxydans lithotrophicus
           ES-1]
          Length = 262

 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 135/257 (52%), Gaps = 8/257 (3%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           IGK++V  I  +   A    + +  +G        FK F L+ +R++++ GV  + ++++
Sbjct: 10  IGKRVVNAIWRTGYGARFFLMTLLYSG------MSFKRFRLT-VREIFFSGVMSLIIILV 62

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
                G V+  QG   L ++G+E     L+++  +RE+G +L A++ A R+GSA+ AEIG
Sbjct: 63  AGMFVGMVLGLQGYETLKRYGSESALGSLVALSLVRELGPVLAALLFASRAGSAMTAEIG 122

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
            MK  E+I A+  M ++ +  +++PR WA +IS+PLL  L +   + G  +V      + 
Sbjct: 123 LMKATEQISAMELMAVNPIARVVAPRFWAGVISMPLLAALFSAMGVFGGYVVGVVNIGVD 182

Query: 294 FAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
              F+S+  ++     +I  G+IK+     A+  +A+ EG+     +  +    T  VV+
Sbjct: 183 EGSFWSQMQASVDFQHDILNGVIKSLVFGLAVTAIALFEGYDAPPTAEGVSGATTRTVVE 242

Query: 353 SISIVIIIDSLFAIFYF 369
           S   ++++D +   F F
Sbjct: 243 SSLAILMLDFILTAFMF 259


>gi|114328883|ref|YP_746040.1| ABC transporter permease [Granulibacter bethesdensis CGDNIH1]
 gi|114317057|gb|ABI63117.1| ABC transporter permease protein [Granulibacter bethesdensis
           CGDNIH1]
          Length = 259

 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 114/223 (51%), Gaps = 18/223 (8%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +R +  +G   +PVV L +  TG V+A Q     ++F AE     L+S+   RE+G +L 
Sbjct: 45  LRALVEIGYFSLPVVALTAIFTGMVLALQSYTGFARFSAESAIASLVSLSVTRELGPVLA 104

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
            +M+AGR G+A+ AE+G+M++ ++IDA+ T+    ++ L++PR+ A  I+LPLL I+A+ 
Sbjct: 105 GLMVAGRVGAAMAAELGTMRVTDQIDALTTLSTHPMKYLVAPRLLAGTIALPLLVIIADI 164

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN---------IFTGLIKAPFMACAIGIV 327
             ++G     W    I        F+S   LAN         + +GL KA      I + 
Sbjct: 165 LGVMGG----WLVASIKLG-----FNSHTYLANTIASIHMDDVMSGLTKAAVFGFLIALQ 215

Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               G+     +  +G   T+ VV +  +++  D +    +F+
Sbjct: 216 GCYHGYNSRGGAQGVGSATTSAVVTASVLILAFDYVLTELFFS 258


>gi|319945411|ref|ZP_08019671.1| tolerance efflux ABC superfamily ATP binding cassette transporter,
           membrane protein [Lautropia mirabilis ATCC 51599]
 gi|319741197|gb|EFV93624.1| tolerance efflux ABC superfamily ATP binding cassette transporter,
           membrane protein [Lautropia mirabilis ATCC 51599]
          Length = 260

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 122/225 (54%), Gaps = 7/225 (3%)

Query: 153 LLSLIR------QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206
           LLSL R      Q+Y+VG   + ++++     G V+  QG + L ++GAE     L+++ 
Sbjct: 34  LLSLKRPRLISEQVYFVGNRSLSIILISGLFVGFVLGLQGYYNLERYGAESSLGLLVALS 93

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            LRE+G +++A++ AGR+ ++I A IG MK  E++ A+  MG+D ++ +++PR  A++I+
Sbjct: 94  LLRELGPVVSALLFAGRACTSITAGIGLMKSGEQLIAMEMMGVDPMKRVLAPRFMAVMIA 153

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIG 325
           LPLL +L +   I+GA +V  +   +    F+S+     +  A++  G+IK+   A   G
Sbjct: 154 LPLLALLFSAVGIVGAWVVGVQMIGVDPGSFWSQMQGGVSFRADVLNGVIKSFVFALLCG 213

Query: 326 IVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            +A+  G         + +  TT VV S   V+  D L     F 
Sbjct: 214 FIALVVGHESDATPEGVARATTTTVVISSLAVLASDVLMTALMFG 258


>gi|186684391|ref|YP_001867587.1| hypothetical protein Npun_R4269 [Nostoc punctiforme PCC 73102]
 gi|186466843|gb|ACC82644.1| protein of unknown function DUF140 [Nostoc punctiforme PCC 73102]
          Length = 265

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 107/203 (52%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + QM  VG   + + +L +   GAV   Q A +   FGA      ++SI   RE+  +LT
Sbjct: 42  LEQMAAVGPDSLFIALLTAIFVGAVFTIQVAREFINFGAGNIIGGVLSIALTRELSPVLT 101

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV++AGR GSA  AEIG+M++ E+IDA+  +  D +  L+ PR+ A  + LP+LT+L+  
Sbjct: 102 AVVLAGRVGSAFAAEIGTMRVTEQIDAMLMLKTDPIDYLVIPRVIACCLMLPILTLLSLI 161

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           + + G  I+    Y++   VF     +   + +I + ++KA      I ++    G    
Sbjct: 162 TGMFGGFIIATNVYNLSDTVFLDSARNFLGIWDIISAMLKAFCFGILIAVIGCSWGLTTT 221

Query: 337 VHSNSLGKKVTTCVVQSISIVII 359
             +  +G+  TT VV ++ I+ +
Sbjct: 222 GGAKGVGQSTTTAVVTALLIIFV 244


>gi|170078977|ref|YP_001735615.1| ABC-type toluene export system, permease component [Synechococcus
           sp. PCC 7002]
 gi|169886646|gb|ACB00360.1| ABC-type toluene export system, permease component [Synechococcus
           sp. PCC 7002]
          Length = 259

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 101/196 (51%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
            QM   G   +  V+L++F  G +   Q A +L+ FGAE F     +I   RE+  +LTA
Sbjct: 42  EQMLTAGPKALVPVLLVAFFGGMIFTIQTARELTTFGAESFVGGAFAIAFCRELAPILTA 101

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
            +IAG+ GSA  AE+GSMKI E+IDA+  +  + V  L+ PR+ A  + LP+LT+ A   
Sbjct: 102 SIIAGQVGSAFAAELGSMKITEQIDALYMLRSNPVDYLVMPRVVACCLMLPILTVFALVV 161

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            +IG +   +++YD+    F +   +     ++    +K       +GI+    G     
Sbjct: 162 GVIGGTGAAYQFYDLAPINFLTSVQTFLQPRDLINVGVKGILFGLLVGIIGCSWGLTTVG 221

Query: 338 HSNSLGKKVTTCVVQS 353
            +  +G+  T+ VV +
Sbjct: 222 STQQVGRSATSAVVTT 237


>gi|255530709|ref|YP_003091081.1| hypothetical protein Phep_0797 [Pedobacter heparinus DSM 2366]
 gi|255343693|gb|ACU03019.1| protein of unknown function DUF140 [Pedobacter heparinus DSM 2366]
          Length = 269

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 121/243 (49%), Gaps = 7/243 (2%)

Query: 134 LVISNTGEFCASSYKFKGFL-----LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
           L + +  +F A  +K +GFL       L RQ Y +G     ++    F+TG V  +Q   
Sbjct: 26  LTLYDVYKFIARFFK-EGFLPPYEARELFRQCYEIGYRSALLISTTGFITGIVFTKQSRP 84

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            LS+FGA  +   L+ I  LR +  LLT ++ AG+ GS+I AE+GSM++ E+IDA+    
Sbjct: 85  SLSEFGATSWLPSLVGIALLRTLAPLLTGLIAAGKVGSSIGAELGSMRVTEQIDAMEVSA 144

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
            +  + L+S R+ A  I++P+LT       ++GA + +          FF       T  
Sbjct: 145 TNPFKFLVSTRVLAATITIPILTFYTAMVGMLGALLNVSLSEGTSARAFFQSSLEQITFL 204

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +I    +KA      IG+V   +G+     +  +GK   + VV ++  +I I+ + ++ +
Sbjct: 205 DITASTVKAILFGFTIGMVGCYQGYNSSKGTEGVGKAANSAVVIAM-FLIFIEEVVSVQF 263

Query: 369 FAI 371
           F +
Sbjct: 264 FGL 266


>gi|126643117|ref|YP_001086101.1| toluene tolerance efflux transporter [Acinetobacter baumannii ATCC
           17978]
          Length = 235

 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 113/206 (54%), Gaps = 1/206 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + QM+ VGV  + ++ +     G V+  QG   L   G+E     ++S+  LRE+  ++ 
Sbjct: 19  VYQMHRVGVMSLLIITVSGLFIGLVLGLQGYSILVNVGSESMLGTMVSLTLLRELAPVVA 78

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+GSA+ AEIGSMK +E++ ++  +G+D ++ ++SPR+WA I+SLP+LT++   
Sbjct: 79  ALLFAGRAGSALTAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAA 138

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAV 335
             I+G  +V   +  +    F+S   +      ++  G+IK+   A     +A+ +G+A 
Sbjct: 139 IGIVGGKLVGVDFLGVDEGSFWSGMQNNVQFGHDVVNGIIKSIVFALLCTWIAVFQGYAC 198

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361
                 +   +T  VV S   V+  D
Sbjct: 199 DPTPEGIATAMTRTVVYSSLCVLGFD 224


>gi|90408209|ref|ZP_01216376.1| hypothetical protein PCNPT3_11414 [Psychromonas sp. CNPT3]
 gi|90310655|gb|EAS38773.1| hypothetical protein PCNPT3_11414 [Psychromonas sp. CNPT3]
          Length = 259

 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 134/234 (57%), Gaps = 3/234 (1%)

Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198
           T   C   +K K F L  I Q++ +G+  +P+++      G V++ QG + L  + AE  
Sbjct: 28  TRTLCVKPHK-KLFSL-FIVQIFQLGILSLPIILTAGLFIGMVLSLQGYYVLVAYAAEEN 85

Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258
              ++++  LRE+G +++A++ AGR+GSA+ AEIG M+  E++ ++  MG+  ++ +++P
Sbjct: 86  LGSMVALSLLRELGPVVSALLFAGRAGSALTAEIGLMQSTEQLASMEMMGVSPLKRVLAP 145

Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKA 317
           R+ A +I+LP+LT+L N  AI G  ++   +  I    F+S    +  L +++  G+IK+
Sbjct: 146 RLLAGVITLPMLTLLFNVFAIWGGYLIGVHWMGIDAGSFWSVMQGSVDLFSDVGNGIIKS 205

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
              A  I  VA+  G+ V  ++  + +  TT VV S  +++ +D +  +F F +
Sbjct: 206 VIFALIITWVALYNGYYVIPNAQGISRSTTTTVVVSSLLILAMDFILTVFMFGM 259


>gi|220917185|ref|YP_002492489.1| protein of unknown function DUF140 [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219955039|gb|ACL65423.1| protein of unknown function DUF140 [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 251

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 112/230 (48%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
            G +I   GE  A +++       ++ QM ++G     +V +     G V   Q  + L 
Sbjct: 12  FGRMILFAGEIVAWAFRPPFRPDQILAQMAFIGAGSAFIVGVTGTFAGMVFGLQMNYALR 71

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           QF AE ++    +    RE+  + TA+M+ GR+GSAI  E+G+M++ E+IDA+ TM +  
Sbjct: 72  QFAAEGYTGGSTAFALARELSPVFTALMVTGRAGSAITTELGTMRVTEQIDAMETMAVSP 131

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           ++ L+ PR+ A I+  P+LT+L N     GA ++      IP   F           +IF
Sbjct: 132 IQYLVVPRVVASILMFPVLTMLFNALGYGGAYVMGVFVSGIPEGPFIQHTREFLGPNDIF 191

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            GL KA      + ++    G+A    +  +G+  T  VV S   +++ D
Sbjct: 192 HGLGKAVLFGYIVAVITTWRGYAASGGARGVGEGTTRAVVASSVAILVAD 241


>gi|197122403|ref|YP_002134354.1| hypothetical protein AnaeK_1997 [Anaeromyxobacter sp. K]
 gi|196172252|gb|ACG73225.1| protein of unknown function DUF140 [Anaeromyxobacter sp. K]
          Length = 251

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 112/230 (48%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
            G +I   GE  A +++       ++ QM ++G     +V +     G V   Q  + L 
Sbjct: 12  FGRMILFAGEIVAWAFRPPFRPDQILAQMAFIGAGSAFIVGVTGTFAGMVFGLQMNYALR 71

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           QF AE ++    +    RE+  + TA+M+ GR+GSAI  E+G+M++ E+IDA+ TM +  
Sbjct: 72  QFAAEGYTGGSTAFALARELSPVFTALMVTGRAGSAITTELGTMRVTEQIDAMETMAVSP 131

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           ++ L+ PR+ A I+  P+LT+L N     GA ++      IP   F           +IF
Sbjct: 132 IQYLVVPRVVASILMFPVLTMLFNALGYGGAYVMGVFVSGIPEGPFIQHTREFLGPDDIF 191

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            GL KA      + ++    G+A    +  +G+  T  VV S   +++ D
Sbjct: 192 HGLGKAVLFGYIVAVITTWRGYAASGGARGVGEGTTRAVVASSVAILVAD 241


>gi|209526324|ref|ZP_03274853.1| protein of unknown function DUF140 [Arthrospira maxima CS-328]
 gi|209493253|gb|EDZ93579.1| protein of unknown function DUF140 [Arthrospira maxima CS-328]
          Length = 261

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 108/215 (50%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + QM  VG   + + +L +   G V   Q A +    GA      ++++   RE+  +LT
Sbjct: 42  LEQMAIVGPESLFIALLTASFVGMVFTIQVAQEFITLGAGHLVGGILALSLSRELTPVLT 101

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           +V+IAGR  SA  AE+G+M++ E+IDA+  M  D V  L+ PR+ A  + LPLLTI+   
Sbjct: 102 SVIIAGRVCSAFAAELGTMRVTEQIDALYIMKTDPVDYLVIPRVLACSLMLPLLTIICLI 161

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           + + G  ++   +Y+IP  +F         L ++ +  IK+     AI ++    G    
Sbjct: 162 TGLAGGLLIATSFYNIPSVLFLDSIRDLMGLWDLISAEIKSLVFGWAIAVIGTSWGLTTT 221

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
             +  +G+  TT VV S+  + I+D   +   F +
Sbjct: 222 GGAKGVGQSTTTAVVTSLLAIFILDFFLSWLLFKV 256


>gi|86606727|ref|YP_475490.1| hypothetical protein CYA_2087 [Synechococcus sp. JA-3-3Ab]
 gi|86555269|gb|ABD00227.1| conserved hypothetical protein [Synechococcus sp. JA-3-3Ab]
          Length = 255

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 111/213 (52%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + Q+  VG+  + +V++ + V   V   Q A +   FGA      +++I   RE+  ++T
Sbjct: 32  LEQLAAVGLESLLIVLITAVVISGVFTIQLAREFINFGASSLIGGVLAIALARELTPVVT 91

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV++AGR GSA  AE+G+MK+ E+IDA+  +  D V  L+ PR+ A  + LP+LTIL+  
Sbjct: 92  AVILAGRVGSAFAAELGTMKVTEQIDALYLLRTDPVDYLVIPRVVAAGLMLPVLTILSLL 151

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           + ++G  I+    Y+IP  VF +   +     ++    +KA      I IV    G +  
Sbjct: 152 TGLVGGMIICASVYNIPSTVFLTSAQNLLAPWDLIVCCLKAMVFGSLIAIVGSNWGLSTS 211

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
             +  +G+  T  VV ++  V + + L +   F
Sbjct: 212 GGAKGVGRSTTDAVVTALLGVFVTNFLISWLAF 244


>gi|83647976|ref|YP_436411.1| organis solvents resistance ABC transporter permease [Hahella
           chejuensis KCTC 2396]
 gi|83636019|gb|ABC31986.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Hahella chejuensis KCTC
           2396]
          Length = 259

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 121/215 (56%), Gaps = 2/215 (0%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           + KGF L L++Q+Y VGV  + ++++     G V+  QG   L  +G+E     ++++  
Sbjct: 35  RMKGFPL-LLKQLYSVGVLSLVIIVVSGLFIGMVLGLQGYNILVDYGSEQAIGQMIALTL 93

Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267
           +RE+G ++TA++ AGR+GSA+ AEIG MK  E++ ++  MG+D +R +I+PR+ A  I++
Sbjct: 94  VRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMGVDPLRQIIAPRLLAGFIAM 153

Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGI 326
           P+L ++ +   + G  +V  ++  +    F+S   ++   + +I  G+IK+         
Sbjct: 154 PMLAMIFSVVGVWGGKMVGVEWLGVYEGSFWSNMQASVDFSDDILNGIIKSIVFGVVCTW 213

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           +A+ +G+     S  +    T  VV S   V+ +D
Sbjct: 214 IAVFQGYDSVPTSEGISSATTKTVVYSSLAVLGLD 248


>gi|169632329|ref|YP_001706065.1| toluene tolerance efflux ABC transporter membrane protein
           [Acinetobacter baumannii SDF]
 gi|239503256|ref|ZP_04662566.1| toluene tolerance efflux ABC transporter membrane protein
           [Acinetobacter baumannii AB900]
 gi|260549862|ref|ZP_05824078.1| toluene tolerance efflux transporter [Acinetobacter sp. RUH2624]
 gi|169151121|emb|CAO99787.1| toluene tolerance efflux transporter (ABC superfamily, membrane)
           [Acinetobacter baumannii]
 gi|193078493|gb|ABO13499.2| toluene tolerance efflux transporter [Acinetobacter baumannii ATCC
           17978]
 gi|260407112|gb|EEX00589.1| toluene tolerance efflux transporter [Acinetobacter sp. RUH2624]
          Length = 258

 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 110/198 (55%), Gaps = 1/198 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + QM+ VGV  + ++ +     G V+  QG   L   G+E     ++S+  LRE+  ++ 
Sbjct: 42  VYQMHRVGVMSLLIITVSGLFIGLVLGLQGYSILVNVGSESMLGTMVSLTLLRELAPVVA 101

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+GSA+ AEIGSMK +E++ ++  +G+D ++ ++SPR+WA I+SLP+LT++   
Sbjct: 102 ALLFAGRAGSALTAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAA 161

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAV 335
             I+G  +V   +  +    F+S   +      ++  G+IK+   A     +A+ +G+A 
Sbjct: 162 IGIVGGKLVGVDFLGVDEGSFWSGMQNNVQFGHDVVNGIIKSIVFALLCTWIAVFQGYAC 221

Query: 336 GVHSNSLGKKVTTCVVQS 353
                 +   +T  VV S
Sbjct: 222 DPTPEGIATAMTRTVVYS 239


>gi|56708629|ref|YP_170525.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110671100|ref|YP_667657.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis FSC198]
 gi|134301425|ref|YP_001121393.1| ABC-type transporter involved in resistance to organic solvents,
           permease protein [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|224457822|ref|ZP_03666295.1| ABC-type transporter involved in resistance to organic solvents,
           permease protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254371262|ref|ZP_04987264.1| toluene ABC superfamily ATP binding cassette transporter
           [Francisella tularensis subsp. tularensis FSC033]
 gi|254875493|ref|ZP_05248203.1| toluene ABC superfamily ATP binding cassette transporter
           [Francisella tularensis subsp. tularensis MA00-2987]
 gi|56605121|emb|CAG46242.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110321433|emb|CAL09625.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis FSC198]
 gi|134049202|gb|ABO46273.1| ABC-type transporter involved in resistance to organic solvents,
           permease protein [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|151569502|gb|EDN35156.1| toluene ABC superfamily ATP binding cassette transporter
           [Francisella tularensis subsp. tularensis FSC033]
 gi|254841492|gb|EET19928.1| toluene ABC superfamily ATP binding cassette transporter
           [Francisella tularensis subsp. tularensis MA00-2987]
 gi|282159866|gb|ADA79257.1| ABC-type transporter involved in resistance to organic solvents,
           permease protein [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 254

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 111/195 (56%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I Q+  VGV+ + +++      G V++ QG + LS+FGA      ++++  LRE+G ++T
Sbjct: 39  IIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGAHSLLGVMVALSVLRELGPVVT 98

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+ S+I +EIG MK  ++I++++ M ++ +  ++S R WA +IS P+L ++   
Sbjct: 99  AMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFILSTRFWACMISGPILALIFAS 158

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            AI+   I+      I +  F+S   S+   ++I  G+IK+   A     +A+ +G+   
Sbjct: 159 VAILAGFILAEAALGISYGEFWSNIQSSVIASDISNGIIKSIVFAFITAWIALYQGYYCI 218

Query: 337 VHSNSLGKKVTTCVV 351
             SN + K  T  VV
Sbjct: 219 PDSNGIAKATTKTVV 233


>gi|284929638|ref|YP_003422160.1| hypothetical protein UCYN_11070 [cyanobacterium UCYN-A]
 gi|284810082|gb|ADB95779.1| conserved hypothetical integral membrane protein [cyanobacterium
           UCYN-A]
          Length = 263

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 105/205 (51%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + QM  VG   + + ++ +   G V   Q A +   FGA      ++++   RE+  +LT
Sbjct: 43  LEQMSVVGPESLTISMITAAFVGMVFTIQVAREFISFGAVSTVGGVLALALTRELAPVLT 102

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV++AGR GSA  AEIG+M++ E++DA+  +  D +  L+ PR+ A  + LP+L IL+  
Sbjct: 103 AVVVAGRVGSAFAAEIGTMRVTEQVDALYMLKTDPISYLVVPRVLACCLMLPILNILSLI 162

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           + + G  ++    YDI   VF +   +     ++ T  IKA      I ++    G    
Sbjct: 163 TGMAGGLLIANGLYDISVYVFLTSVRNFLEFWDLITSTIKAITFGGLIAVIGCSWGLTTS 222

Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361
             +  +G+  TT VV S+  V II+
Sbjct: 223 GGAKGVGQSTTTAVVTSLLAVFIIN 247


>gi|86158287|ref|YP_465072.1| ABC amino acid transporter, inner membrane subunit
           [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774798|gb|ABC81635.1| ABC amino acid transporter, inner membrane subunit
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 251

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 112/229 (48%)

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G +I   GE  A +++       ++ QM ++G     +V +     G V   Q  + L Q
Sbjct: 13  GRMILFAGEIVAWAFRPPFRPDQILAQMAFIGAGSAFIVGVTGTFAGMVFGLQMNYALRQ 72

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
           F AE ++    +    RE+  + TA+M+ GR+GSAI  E+G+M++ E+IDA+ TM +  +
Sbjct: 73  FAAEGYTGGSTAFALARELSPVFTALMVTGRAGSAITTELGTMRVTEQIDAMETMAVSPI 132

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
           + L+ PR+ A I+  P+LT+L N     GA ++      IP   F           +IF 
Sbjct: 133 QYLVVPRVLASILMFPVLTMLFNALGYGGAYVMGVFVSGIPEGPFIQHTREFLGPDDIFH 192

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           GL KA      + ++    G++    +  +G+  T  VV S   +++ D
Sbjct: 193 GLGKAVLFGYIVAVITTWRGYSASGGARGVGEGTTRAVVASSVAILVAD 241


>gi|296117337|ref|ZP_06835927.1| hypothetical protein GXY_16012 [Gluconacetobacter hansenii ATCC
           23769]
 gi|295976103|gb|EFG82891.1| hypothetical protein GXY_16012 [Gluconacetobacter hansenii ATCC
           23769]
          Length = 433

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 120/220 (54%), Gaps = 4/220 (1%)

Query: 150 KGFL--LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           KG +  + L+  +   G + + +V +++F+ GA++A  GA QL +F A+I+   L+ I  
Sbjct: 208 KGMMRTIDLMSDVRAAGPTALVIVGVVNFLVGAILAFVGAVQLHKFAADIYVASLVGIAM 267

Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267
           +RE+  ++TA+++AGR+G A  A I +M+ NEEIDA+   G+     LI P + ALI+++
Sbjct: 268 VREMSAVMTAIIMAGRTGGAYAARISTMQGNEEIDALTVFGIPVASYLILPSVLALILTM 327

Query: 268 PLLTILANFSAIIGASIVIWKYYDI-PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326
           PLL +      + G   V +   ++ P   F    ++ A L+    G IK+      IG+
Sbjct: 328 PLLYLYGCLIGMFGGFFVSYIMLNVTPLGYFHETLYAVA-LSQFVFGFIKSIVFGGFIGL 386

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
            + + G   G  +  +G   T  VV  I  VI ID++FA+
Sbjct: 387 TSCRIGLKAGRSAADVGIAATRAVVVGIVGVIAIDAIFAV 426


>gi|284049033|ref|YP_003399372.1| protein of unknown function DUF140 [Acidaminococcus fermentans DSM
           20731]
 gi|283953254|gb|ADB48057.1| protein of unknown function DUF140 [Acidaminococcus fermentans DSM
           20731]
          Length = 260

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 131/259 (50%), Gaps = 9/259 (3%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           +G+K+V    D C++    G V++   E C ++         ++RQM  +G   +P+V +
Sbjct: 10  VGRKMV----DLCART---GRVVNLFLEACRAAGTAD--RREVLRQMARLGADSLPIVSM 60

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
               TG V++ Q A +  +FGA      +++I   RE+  +LT V++AGR G+AI AEIG
Sbjct: 61  TILCTGMVMSVQTAKEFVRFGAADSVGGIVAIAMGRELSPILTGVVVAGRIGAAIAAEIG 120

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           +MK+ E+IDA+R M +  +R L++PR+ A+++ +P+L + AN    +G   V   Y  I 
Sbjct: 121 TMKVTEQIDALRVMAVSPIRFLVTPRLLAIVLMMPVLVVYANLVGDVGGWFVAENYAGIS 180

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
             +F           +I  GLIK       I  +   +G      +  +G   T  VV S
Sbjct: 181 SHMFLESIRGFIEPWDIIGGLIKGAVFGAIIATIGCHKGLNAQQGAEGVGMATTKSVVLS 240

Query: 354 ISIVIIIDSLFAIFYFAIG 372
           I ++ I +   ++  +  G
Sbjct: 241 IILIFIANYFLSVILYVHG 259


>gi|153004838|ref|YP_001379163.1| hypothetical protein Anae109_1976 [Anaeromyxobacter sp. Fw109-5]
 gi|152028411|gb|ABS26179.1| protein of unknown function DUF140 [Anaeromyxobacter sp. Fw109-5]
          Length = 250

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 114/230 (49%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG ++   GE    + +    L  ++ QM ++GV    +V +     G V A Q  F + 
Sbjct: 11  LGRMLMFAGEMVGWAVRPPFRLELVLAQMAFIGVGSAFIVGVTGTFAGMVFALQMNFAMK 70

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           QF AE +    ++    RE+  + TA+M+ GRSGSAI  E+G+M++ E+IDA+ +M ++ 
Sbjct: 71  QFAAEGYVGGSVAFSLARELSPVFTALMVTGRSGSAIATELGTMRVTEQIDAMESMAVNP 130

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           ++ L+ PR+ A +I  P LT+L N     G  ++      IP   + +       + +I 
Sbjct: 131 IQYLVVPRVIASLIMFPFLTMLFNSLGYAGGFVMGVYVAGIPIGPYLAHTQEFMDVGDIL 190

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            GL KA      + ++    G+A    +  +G+  T  VV S   +++ D
Sbjct: 191 HGLFKAVVFGLIVSVITTWRGYAAFGGAKGVGEGTTRGVVASSITILLAD 240


>gi|284051975|ref|ZP_06382185.1| hypothetical protein AplaP_10931 [Arthrospira platensis str.
           Paraca]
 gi|291567910|dbj|BAI90182.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 261

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 108/215 (50%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + QM  VG   + + +L +   G V   Q A +    GA      ++++   RE+  +LT
Sbjct: 42  LEQMAIVGPESLFIALLTASFVGMVFTIQVAQEFIALGAGHLVGGVLALSLSRELTPVLT 101

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           +V+IAGR  SA  AE+G+M++ E+IDA+  M  D V  L+ PR+ A  + LPLLTI+   
Sbjct: 102 SVIIAGRVCSAFAAELGTMQVTEQIDALYMMKTDPVDYLVIPRVLACSLMLPLLTIICLI 161

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           + + G  ++   +Y+IP  +F         L ++ +  IK+     AI ++    G    
Sbjct: 162 TGLAGGLLIATSFYNIPSVLFLDSIRDLMGLWDLISAEIKSVVFGWAIAVIGTSWGLTTT 221

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
             +  +G+  TT VV S+  + I+D   +   F +
Sbjct: 222 GGAKGVGQSTTTAVVTSLLAIFILDFFLSWLLFKV 256


>gi|307153262|ref|YP_003888646.1| hypothetical protein Cyan7822_3422 [Cyanothece sp. PCC 7822]
 gi|306983490|gb|ADN15371.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7822]
          Length = 264

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 110/211 (52%), Gaps = 8/211 (3%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ----FGAEIFSIDLM 203
           K+K    + + QM  VG    P  + IS VT A +      Q+S+    FGA  +   ++
Sbjct: 34  KYKIHRRNTLDQMAIVG----PESLTISLVTAAFVGMVFTIQVSREFIYFGAGSYVGGVL 89

Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263
           S+   RE+  +LTAV++AGR GSA  AEIG+M++ E+IDA+  +  D +  L+ PR+ A 
Sbjct: 90  SLALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQIDALHMLKTDPIDYLVIPRVLAC 149

Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323
            + LP+LT+LA  + I G   +    Y+I  AVF +   +     ++ + ++K+      
Sbjct: 150 SLMLPILTVLALLTGIAGGIAIADSLYNISPAVFLNSARNFLQTWDLVSCILKSAVFGSL 209

Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
           I ++    G      +  +G+  TT VV ++
Sbjct: 210 IAVIGCSWGLTTSGGAKGVGQSTTTAVVTAL 240


>gi|299768645|ref|YP_003730671.1| toluene tolerance protein Ttg2B [Acinetobacter sp. DR1]
 gi|298698733|gb|ADI89298.1| toluene tolerance protein Ttg2B [Acinetobacter sp. DR1]
          Length = 259

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 130/253 (51%), Gaps = 16/253 (6%)

Query: 114 IGKKIVKFINDSCSQAHILGLVI---SNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170
           +G+ +++ I    + AH+L  +I    + G F    Y           QM+ VGV  + +
Sbjct: 7   LGRLVIERIRGIGAAAHMLLQIIFSLPSKGGFGRFGY-----------QMHRVGVMSLLI 55

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           + +     GAV+  Q    L  FGAE      +S+  LRE+  ++ A++ AGR+GSA+ A
Sbjct: 56  ITVSGLFIGAVLGLQMYSILVTFGAESMLGTAISLTLLRELASVVAALLFAGRAGSALTA 115

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           EIGSMK +E++ ++  +G+D ++ ++SPR+WA I+SLP+LT++     IIG  +V   + 
Sbjct: 116 EIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIIGGKMVGVDFL 175

Query: 291 DIPFAVFFSRFHSTATLA-NIFTG-LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
                 F+S   +T     +I  G +IK+   A     VA+ +G+A       +   +T 
Sbjct: 176 GADEGSFWSGMQNTVRFGHDIINGTIIKSIVFALICTWVAVYQGYACDPTPEGIATAMTR 235

Query: 349 CVVQSISIVIIID 361
            VV S   V+  D
Sbjct: 236 TVVYSSLCVLGFD 248


>gi|184159620|ref|YP_001847959.1| ABC transporter [Acinetobacter baumannii ACICU]
 gi|294842631|ref|ZP_06787314.1| ABC-type transport system [Acinetobacter sp. 6014059]
 gi|183211214|gb|ACC58612.1| ABC-type transport system [Acinetobacter baumannii ACICU]
 gi|322509530|gb|ADX04984.1| ttg2B [Acinetobacter baumannii 1656-2]
 gi|323519550|gb|ADX93931.1| ABC-type transport system [Acinetobacter baumannii TCDC-AB0715]
          Length = 258

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 110/198 (55%), Gaps = 1/198 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + QM+ VGV  + ++ +     G V+  QG   L   G+E     ++S+  LRE+  ++ 
Sbjct: 42  VYQMHRVGVMSLLIITVSGLFIGLVLGLQGYSILVNVGSESMLGTMVSLTLLRELAPVVA 101

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+GSA+ AEIGSMK +E++ ++  +G+D ++ ++SPR+WA I+SLP+LT++   
Sbjct: 102 ALLFAGRAGSALTAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAA 161

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAV 335
             I+G  +V   +  +    F+S   +      ++  G+IK+   A     +A+ +G+A 
Sbjct: 162 IGIVGGKLVGVDFLGVDEGSFWSGMQNNVQFGHDVVNGIIKSIVFALLCTWIAVFQGYAC 221

Query: 336 GVHSNSLGKKVTTCVVQS 353
                 +   +T  VV S
Sbjct: 222 EPTPEGIATAMTRTVVYS 239


>gi|67926111|ref|ZP_00519354.1| Protein of unknown function DUF140 [Crocosphaera watsonii WH 8501]
 gi|67852045|gb|EAM47561.1| Protein of unknown function DUF140 [Crocosphaera watsonii WH 8501]
          Length = 263

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 107/205 (52%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + QM  VG   + + ++ +   G V   Q A +   FGA      ++++   RE+  +LT
Sbjct: 43  LDQMSVVGPESLTIALITAGFVGMVFTIQVAREFISFGAASTVGGVLALALTRELAPVLT 102

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV++AGR GSA  AEIG+M++ E+IDA+  +  D V  L+ PR+ A  + LP+L IL+  
Sbjct: 103 AVVVAGRVGSAFAAEIGTMRVTEQIDALYMLKTDPVDYLVVPRVLACCLMLPVLNILSLI 162

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           + + G  ++    YDI   VF +   +   L ++ T +IK+      I ++    G    
Sbjct: 163 TGMTGGLLIANGLYDISPYVFLTSIRNFLELWDLVTSVIKSVAFGGLIAVIGCSWGLTTT 222

Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361
             +  +G+  TT VV ++  V +++
Sbjct: 223 GGAKGVGQSTTTAVVTALLAVFVVN 247


>gi|30250308|ref|NP_842378.1| hypothetical protein NE2383 [Nitrosomonas europaea ATCC 19718]
 gi|30181103|emb|CAD86295.1| Domain of unknown function DUF140 [Nitrosomonas europaea ATCC
           19718]
          Length = 271

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 113/213 (53%), Gaps = 1/213 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           R++Y+ GV  + ++++     G V+  QG   L +FG+E     L+++  +RE+G ++ A
Sbjct: 55  REIYFAGVLSLIIILVSGLFVGMVLGLQGYETLQKFGSESAVGTLVALSLVRELGPVIAA 114

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ A R+GSA+ AEIG MK  E++ A+  M +D +  +++PR W  + S+PLL  + +  
Sbjct: 115 LLFASRAGSAMTAEIGLMKATEQLAAMGMMAVDPIARIVAPRFWGGVFSMPLLAAMFSVM 174

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            + G  +V   +  +    F+S+  ++     +I  G+IK+ F    +  +A+ EGF   
Sbjct: 175 GVFGGYLVTVVFIGVDEGSFWSQMQNSVDFRYDIVNGVIKSCFFGVVVTAIAVFEGFDAP 234

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
             +  +    T  VV S   ++ +D +   F F
Sbjct: 235 PTAEGVSGATTRTVVTSSLAILGLDFVLTAFMF 267


>gi|209964880|ref|YP_002297795.1| ABC transporter permease protein, putative [Rhodospirillum centenum
           SW]
 gi|209958346|gb|ACI98982.1| ABC transporter permease protein, putative [Rhodospirillum centenum
           SW]
          Length = 256

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 118/230 (51%), Gaps = 34/230 (14%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE--IFSIDLMSILQLREIGVLL 215
           RQM  +G   +PVV L +  TG V+A Q     S+F AE  I ++ ++SI   RE+G +L
Sbjct: 44  RQMIDIGYYSLPVVGLTALFTGMVLALQSYSGFSRFEAESAIATVVVLSIT--RELGPVL 101

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
             +M+AGR G+A+ AE+G+M++ E++DA+ T+  +  + L+ PR+ A  + LPLL ++A+
Sbjct: 102 AGLMVAGRIGAAMAAELGTMRVTEQVDALTTLSTNPFKYLVVPRLLAGTLMLPLLVLVAD 161

Query: 276 FSAIIGASIV---------------IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320
              + G  +V                WKY ++                ++ +GL+KA   
Sbjct: 162 IIGVFGGFLVGVYRLNFNAGGYITSTWKYLEV---------------MDVVSGLVKAGAF 206

Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             AI ++    G+     +  +G   T  VV +  ++++++ L    +F+
Sbjct: 207 GFAISLMGCYHGYHSRGGAQGVGAATTNAVVSASILILVLNYLLTGIFFS 256


>gi|253991145|ref|YP_003042501.1| hypothetical protein PAU_03671 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253782595|emb|CAQ85759.1| conserved hypothetical Protein [Photorhabdus asymbiotica]
          Length = 262

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 117/221 (52%), Gaps = 11/221 (4%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L +Q++ VGV  + ++++     G V+  QG   L+ + AE     ++++  LRE+G ++
Sbjct: 46  LRQQLFSVGVQSLLIIVVSGLFIGMVLGLQGYLVLTTYSAEASLGMMVAVSLLRELGPVV 105

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E+I ++  M +D +R +I+PR WA  IS+PLL+++  
Sbjct: 106 TALLFAGRAGSALTAEIGLMKATEQISSLEMMAIDPLRRVIAPRFWAGFISMPLLSLIFV 165

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHST----ATLANIFTGLIKAPFMACAIGIVAM 329
              I G ++  V WK  D  F  F+S   S       L N F   IK+   A  +  +A+
Sbjct: 166 AVGICGGAMVGVDWKGIDSGF--FWSSMQSAIEWQKDLLNCF---IKSVVFAITVTWIAL 220

Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             G+     S  + +  T  VV +   V+ +D +     F 
Sbjct: 221 FNGYDAIPTSEGISQATTRTVVHASLAVLGLDFVLTALMFG 261


>gi|89093955|ref|ZP_01166900.1| probable permease of ABC transporter [Oceanospirillum sp. MED92]
 gi|89081841|gb|EAR61068.1| probable permease of ABC transporter [Oceanospirillum sp. MED92]
          Length = 259

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 115/207 (55%), Gaps = 1/207 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y+VGV  + ++++     G V+  QG   L  +G+E     ++++  +RE+  ++
Sbjct: 42  LVQQIYFVGVLSLIIIVVSGLFIGMVLGLQGYTILVDYGSEQAVGQMVALSLVRELAPVV 101

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  +G+D +R +I+PR WA  I LP+L+ +  
Sbjct: 102 TALLFAGRAGSALTAEIGLMKATEQLSSLEMIGVDPLRRIIAPRFWAGFICLPILSAIFA 161

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334
              + G ++V   +  I    F++   ++     ++  GL+KA      +  +A+ +G+ 
Sbjct: 162 IVGVYGGALVSIDWLGIYDGSFWANMQNSVNFYEDVMNGLVKAVVFGFVVTWIAVFQGYD 221

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIID 361
               S  + +  T  VV S   V+ +D
Sbjct: 222 CIPTSEGISQATTKTVVYSSLAVLGLD 248


>gi|296532300|ref|ZP_06895039.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Roseomonas cervicalis
           ATCC 49957]
 gi|296267376|gb|EFH13262.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Roseomonas cervicalis
           ATCC 49957]
          Length = 261

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 117/215 (54%), Gaps = 4/215 (1%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE--IFSIDLMSILQLREIGVL 214
           +R    +G   +PVV L +  TG V+A Q     S+FGAE  I ++ ++SI   RE+G +
Sbjct: 47  LRAFVEIGYFSLPVVSLTAIFTGMVLALQSYSGFSRFGAESAIANVVVLSIT--RELGPV 104

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           L  +M+AGR G+A  AEIG+M++ ++IDA+ T+  + ++ L++PR+ A  +++PLL ++A
Sbjct: 105 LAGLMVAGRIGAAFAAEIGTMRVTDQIDALTTLSTNPMKYLVAPRLLAGTLAMPLLVVVA 164

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
           +   ++G  ++         A + +   +     ++ +GL+KA      I ++    G+ 
Sbjct: 165 DILGVMGGWLIGTAQLGFTSASYLTSTLNFVQPMDVISGLVKAAVFGFTITLMGCYSGYN 224

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               +  +G   T  VV S  +++ +D +    +F
Sbjct: 225 SRGGAQGVGAATTRAVVASSILILALDYILTAMFF 259


>gi|291279509|ref|YP_003496344.1| ABC transporter permease [Deferribacter desulfuricans SSM1]
 gi|290754211|dbj|BAI80588.1| ABC transporter, permease [Deferribacter desulfuricans SSM1]
          Length = 256

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 119/214 (55%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L +QM ++GV+ + V+IL    TG V A Q      +FGAE     ++ +   RE+G +L
Sbjct: 43  LFKQMEFIGVNSLSVIILTGTFTGMVFAFQSYIGFHRFGAEYMVGTVVGLGMARELGPVL 102

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           +++M+A R+GSAI AEIG+M++ E+IDA+  + ++ V+ L+ PR+ A +I +P+L I+A 
Sbjct: 103 SSIMVAARAGSAIAAEIGTMRVTEQIDALYALAVEPVQYLVVPRMLAGVIVMPILNIIAV 162

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
           F  ++G   V  +   I   ++    +      +I+ G+IKA      + +V   +GF  
Sbjct: 163 FCGVVGGYFVGVEILGINKTLYLEYMYRYVDFDDIYNGIIKATVFGLILTLVGCYKGFYT 222

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              +  +GK  T  VV S  ++++ D +   F F
Sbjct: 223 SGGAEGVGKSTTESVVLSSVLILVFDYILTAFMF 256


>gi|289806792|ref|ZP_06537421.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. AG3]
          Length = 212

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 113/213 (53%), Gaps = 5/213 (2%)

Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
           Y VGV  + ++I+     G V+  QG   L+ + AE     L+++  LRE+G ++ A++ 
Sbjct: 1   YNVGVLSMLIIIVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLF 60

Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280
           AGR+GSA+ AEIG M+  E++ ++  M +D +R +ISPR WA +ISLPLLTI+     I 
Sbjct: 61  AGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIW 120

Query: 281 GASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           G S+  V WK  D  F  F+S   +      ++   LIK+   A  +  +A+  G+    
Sbjct: 121 GGSLVGVSWKGIDAGF--FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWIALFNGYDAIP 178

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            S  + +  T  VV +   V+ +D +     F 
Sbjct: 179 TSAGISRATTRTVVHASLAVLGLDFVLTALMFG 211


>gi|149918249|ref|ZP_01906741.1| putative ABC transporter, permease protein [Plesiocystis pacifica
           SIR-1]
 gi|149821009|gb|EDM80416.1| putative ABC transporter, permease protein [Plesiocystis pacifica
           SIR-1]
          Length = 273

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 117/230 (50%), Gaps = 3/230 (1%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G+  A   +    L  +  Q+  +G+  +PV  ++S   G ++A Q    L+ FGA   S
Sbjct: 42  GQAMARGPRRPWGLFDISYQILQLGIRSIPVTTMMSIFVGMILAWQFGEALADFGAT-NS 100

Query: 200 IDLMSILQL-REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258
           I  ++ L L RE+   L AV +  +  + + AE+GSMK+ E+IDAI  +G D ++ L+ P
Sbjct: 101 IGYVTSLALVRELVPTLLAVTVGTKMATGMTAELGSMKVTEQIDAIAALGADPIKKLVWP 160

Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318
           R+ A  +++PLL    N  A++G  ++    +DIP   F++ +       +      KA 
Sbjct: 161 RLVAACVAMPLLVAWGNVIAMLGGMLISEAVFDIPAGYFYNSYIDELEPIHYVMSQTKAL 220

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID-SLFAIF 367
                 GI+   +GF+    + ++G+  T  V+    +V+I D +L A+F
Sbjct: 221 VFGALAGIIGCYQGFSTKFGTEAVGQSTTETVIAVSVLVLIADFALTALF 270


>gi|39996027|ref|NP_951978.1| ABC transporter permease [Geobacter sulfurreducens PCA]
 gi|39982792|gb|AAR34251.1| ABC transporter, permease protein, putative [Geobacter
           sulfurreducens PCA]
          Length = 256

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 101/173 (58%), Gaps = 2/173 (1%)

Query: 147 YKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206
           ++  G+    + Q   +GV  + ++ L    TG V+A Q   QL  F A  +   ++++ 
Sbjct: 32  FRRPGYYREFVIQFDKMGVGSLFIICLTGLFTGMVMALQALIQLKPFAATSYVGGMVAVT 91

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            ++E+G +L+++M+AGR GS+I AE+G+M + E++DA+R  G D V  L++ R+ AL+++
Sbjct: 92  MVKELGPVLSSLMVAGRVGSSITAELGTMVVTEQVDAMRVEGTDIVSRLVTSRLKALMLA 151

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319
           +P+L ++ +  A++G  I I   YDI   +++          ++  G++K PF
Sbjct: 152 MPMLALVTDAVALLGGYI-IAAGYDINLLMYWKSLPQFMVFQDLIEGVMK-PF 202


>gi|317403202|gb|EFV83724.1| membrane protein [Achromobacter xylosoxidans C54]
          Length = 262

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 116/215 (53%), Gaps = 3/215 (1%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLT 216
           +Q++++G   + ++ +     G V+  QG + L+++GAE  S+ L+  L L RE+G ++T
Sbjct: 48  QQIHFIGNYSLLIIAVSGMFVGFVLGLQGYYTLNRYGAE-ESLGLLVALSLVRELGPVVT 106

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+G+++ AEIG MK  E++ A+  M +D +R ++ PR+W  II++P+L  + + 
Sbjct: 107 ALLFAGRAGTSLTAEIGLMKAGEQLSAMEVMAVDPMRRVLVPRLWGGIIAMPILAAVFSM 166

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFAV 335
             I+G  +V      +    F+S+      + N +  G+IK+      + +VA+ EG+  
Sbjct: 167 VGILGGWVVGVLMIGVDAGAFWSQMQGGVDVWNDVVNGVIKSLVFGVTVTLVALYEGWQA 226

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                 + +  T  VV     V+ +D L     F 
Sbjct: 227 KPTPEGVARATTRTVVVGSLAVLGLDFLLTALMFG 261


>gi|34558257|ref|NP_908072.1| ABC transporter permease [Wolinella succinogenes DSM 1740]
 gi|34483976|emb|CAE10972.1| ABC TRANSPORTER, PERMEASE PROTEIN [Wolinella succinogenes]
          Length = 268

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 109/213 (51%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           QM  +GV    V++L S  TG V+A Q      QFGAE F    + +   RE+G +  A+
Sbjct: 54  QMESIGVGSFWVIVLTSVFTGMVLAIQFYQGFHQFGAENFMSYPIFLAITRELGPVFAAL 113

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           M+  R+ SA+ AE+G+M++ E+IDAI T+ +D  R LI PRI A  +SLPLL IL NF  
Sbjct: 114 MLTSRAISAMAAELGTMRVTEQIDAIDTLAIDSKRYLIVPRILASTLSLPLLVILFNFIG 173

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
            + A  +      +    + S       L+++   L+KA      + +V    G+     
Sbjct: 174 NLSAYFISIHVLGVNEESYRSIVRQYLELSDLVISLVKAFVFGYLVSLVGTYIGYNTRGG 233

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           +  +G+  T+ VV S   +   + L + F+ A+
Sbjct: 234 ARGVGRSTTSAVVFSAVTIFGANYLLSAFFLAM 266


>gi|302338250|ref|YP_003803456.1| protein of unknown function DUF140 [Spirochaeta smaragdinae DSM
           11293]
 gi|301635435|gb|ADK80862.1| protein of unknown function DUF140 [Spirochaeta smaragdinae DSM
           11293]
          Length = 258

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 108/214 (50%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+ Q+ + GV  + V+ LI+ + G VI   G   L QFG       ++  + +RE+G LL
Sbjct: 44  LVMQLLFTGVEALGVISLIALILGGVIIVYGVDLLPQFGQGELIYSILITVIMRELGPLL 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A +I  RSG+AI  E+G M ++ +I+A  ++G+D +  L+ PR   +I S+ LL I  N
Sbjct: 104 CAFIIIARSGTAIATELGQMVVSHQIEAYTSVGVDPISYLVVPRFLGVIFSMILLNIYFN 163

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              +I +  V      IP   +     +     +I + +IK+      I + A   GF V
Sbjct: 164 LFGLIASFFVTSFIQPIPMRDYMYDLITHIRSVDIVSSMIKSLIFGAIIALSATYNGFRV 223

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              S  + + V   VVQS  ++I+ D+L  + Y+
Sbjct: 224 EQSSTEVPQVVIKAVVQSFVLIIVADALITLIYY 257


>gi|85058184|ref|YP_453886.1| hypothetical protein SG0206 [Sodalis glossinidius str. 'morsitans']
 gi|84778704|dbj|BAE73481.1| conserved hypothetical protein [Sodalis glossinidius str.
           'morsitans']
          Length = 260

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 116/216 (53%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++++Y VGV  + ++++     G V+  QG   L+ + AE     L+++  LRE+G ++
Sbjct: 44  LVKKLYGVGVLSLVIIMVSGLFIGMVLGLQGYIILTTYSAESSLGMLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +++PR WA +IS+PLLT +  
Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLTAIFV 163

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G ++V  ++  I    F+S          ++   +IK+   A  +  +A+  G+ 
Sbjct: 164 AVGIWGGAVVGVEWKGIDSGFFWSAMQGAVDWRQDLVNCVIKSVVFAITVTWIALFNGYD 223

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               S  + +  T  VV +   V+ +D +     F 
Sbjct: 224 AIPTSEGISRATTRTVVHASLAVLGLDFVLTALMFG 259


>gi|261415153|ref|YP_003248836.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261371609|gb|ACX74354.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302325884|gb|ADL25085.1| putative ABC transporter, permease protein [Fibrobacter
           succinogenes subsp. succinogenes S85]
          Length = 260

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 111/214 (51%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           ++++M  VGVS +P++ + S  TG V      F+     ++ F       + L E+G LL
Sbjct: 46  IVKEMISVGVSSLPLLFVTSIFTGMVATIMAEFEFHNLVSDKFVGTAACKMVLIELGPLL 105

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++++GR GSA+ AE+GSMK  EE+ A   +GLD  R L  PR +A +  +P LT ++N
Sbjct: 106 TAIVLSGRVGSAVAAELGSMKEKEELSAYVVLGLDPYRYLAMPRFFAFLTMIPCLTAISN 165

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             A+IG  IV     DI    + +      +  +++ G+IK+      I ++A   G   
Sbjct: 166 ALALIGGWIVCVLALDITTYTYSTGMQYLFSNMDLWAGIIKSIVFGTIIFVLAYYHGTHS 225

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              ++ +G    + VV S  ++++ D +   F F
Sbjct: 226 KPGAHGVGLATMSVVVASCLMILVSDFILDAFMF 259


>gi|152996434|ref|YP_001341269.1| hypothetical protein Mmwyl1_2412 [Marinomonas sp. MWYL1]
 gi|150837358|gb|ABR71334.1| protein of unknown function DUF140 [Marinomonas sp. MWYL1]
          Length = 260

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 124/215 (57%), Gaps = 1/215 (0%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           +FK  +  L++Q+Y VGV  + ++I+     G V++ QG   L++FG+E     L+++  
Sbjct: 35  RFKESVNLLVKQLYSVGVLSLVIIIVSGAFIGMVLSLQGYSILAKFGSEEAVGQLLALSL 94

Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267
           LRE+  ++TA++ AGR+GS++ AEIG MK  E++ +   MG+D +R +I+PR  A +I L
Sbjct: 95  LRELSPVVTALLFAGRAGSSLTAEIGLMKATEQLSSFEMMGVDPLRRVIAPRFIAGVICL 154

Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGI 326
           P+L+++ + S I+G  +V  ++  +    F+S    +     +I  GLIKA   +  +  
Sbjct: 155 PILSLIFSASGILGGHLVSVQWLGVYDGAFWSSMQQSVYFDTDIMNGLIKALCFSVVVTW 214

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           +A+ +G+     S  +GK  T  VV     ++ +D
Sbjct: 215 IAVYQGYECVPTSEGIGKATTRTVVLGSLAILALD 249


>gi|86609938|ref|YP_478700.1| hypothetical protein CYB_2505 [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86558480|gb|ABD03437.1| putative membrane protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 252

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 111/211 (52%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           Q+  VG+  + +V++ + V   V   Q A +   FGA      +++I   RE+  ++TAV
Sbjct: 31  QLSAVGLESLLIVLITAVVISGVFTIQLAREFINFGASSLIGGVLAIALARELTPVVTAV 90

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++AGR GSA  AE+G+MK+ E+IDA+  +  D V  L+ PR+ A  + LP+LTIL+  + 
Sbjct: 91  ILAGRVGSAFAAELGTMKVTEQIDALLLLRTDPVDYLVIPRVLAAGLMLPVLTILSLLTG 150

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           ++G  I+    Y+I  AVF +   +  +  ++    +KA      I IV    G +    
Sbjct: 151 LVGGMIICASAYNISPAVFLNSAQTLLSSWDLLVCCLKAMVFGSLIAIVGSNWGLSTSGG 210

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           +  +G+  T  VV ++  V + + L +   F
Sbjct: 211 AKGVGRSTTDAVVTALLGVFVTNFLISWLLF 241


>gi|257092255|ref|YP_003165896.1| hypothetical protein CAP2UW1_0620 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257044779|gb|ACV33967.1| protein of unknown function DUF140 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 271

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 121/215 (56%), Gaps = 3/215 (1%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG-AEIFSIDLMSILQLREIGVLL 215
           IR++YY G   + ++++     G V+  QG   L ++G A+   I L+++  +RE+G ++
Sbjct: 54  IREIYYSGFQSLLIIMVSGLFIGMVLGMQGYETLQRYGSADALGI-LVALSLVRELGPVV 112

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ A R+GS+I AEIG MK  E++ A+  M ++ +  +++PR W  +IS+PLL  L +
Sbjct: 113 AALLFASRAGSSITAEIGLMKATEQLTAMDMMAVNPIARVVAPRFWGGVISMPLLAALFS 172

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
            + + G  ++   +  +    F+S+  ++     +I++G++K+     A+ ++A+ EG+ 
Sbjct: 173 ATGVFGGYLIGVVFIGVDDGAFWSQMQASVDFRYDIWSGIVKSFVFGVAVSLIAVFEGYD 232

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               +  +   + + VV+S   ++ +D +   F F
Sbjct: 233 ALPTAEGVSSSIKSTVVKSALAILALDFVLTSFMF 267


>gi|302340503|ref|YP_003805709.1| protein of unknown function DUF140 [Spirochaeta smaragdinae DSM
           11293]
 gi|301637688|gb|ADK83115.1| protein of unknown function DUF140 [Spirochaeta smaragdinae DSM
           11293]
          Length = 253

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 110/206 (53%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           ++ Q  ++GV  V ++ L S   G + + Q    ++ F AE      +++   RE+  + 
Sbjct: 36  VLEQAEHIGVDSVLIIALSSLSIGMIFSLQVTDLMAMFRAETMVGSAVAMTMGRELAPVF 95

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           T++M+  ++GSA+ AEIG+M+++E+IDA+ TM ++ ++ L+ PRI   II  P+LT L+N
Sbjct: 96  TSLMLVAKNGSAMAAEIGTMRVSEQIDAMETMSVNPIQYLVVPRIIGSIIVFPILTALSN 155

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              ++G+ +V      +  A +  + +      +I++G IKA  M   + ++    GF  
Sbjct: 156 VVGVLGSYVVSIHMKGVDPAGYLDQLYRFVDPVDIWSGFIKAAIMGALVSLICCFFGFTT 215

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361
              S  +G   T  VV +   V++ D
Sbjct: 216 SGGSKEVGTASTKAVVTASVAVLVSD 241


>gi|315185558|gb|EFU19327.1| protein of unknown function DUF140 [Spirochaeta thermophila DSM
           6578]
          Length = 263

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 106/214 (49%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+ Q+ + GV  + V+ L++   GA+I  QG   L QFG       ++  +  RE+G +L
Sbjct: 49  LVLQILFTGVEALNVIALLALGIGALIIIQGVSLLPQFGQGDLVYPILIAVITRELGPIL 108

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA ++  RSG+AI  EIG+M ++ EI+A    G+D +  L+ PR    I+++ LL +  N
Sbjct: 109 TAFIVTARSGTAIATEIGTMVVSHEIEAYMAFGIDPISYLVVPRFLGAIVAVTLLNVYFN 168

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              ++G+  V    + I FA +F          +I + L+K+      I +V    GF V
Sbjct: 169 IFGLLGSFFVTSLIHPIQFAEYFHNLLLRLKPVDILSSLVKSATFGAVIALVGTYSGFQV 228

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              S  + +     V +     I+ D+L  + Y+
Sbjct: 229 ERASTEIPQVAIKAVGKGFVYCIVADALLTLVYY 262


>gi|307718422|ref|YP_003873954.1| transporter [Spirochaeta thermophila DSM 6192]
 gi|306532147|gb|ADN01681.1| putative transporter [Spirochaeta thermophila DSM 6192]
          Length = 263

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 106/214 (49%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+ Q+ + GV  + V+ L++   GA+I  QG   L QFG       ++  +  RE+G +L
Sbjct: 49  LVLQILFTGVEALNVIALLALGIGALIIIQGVSLLPQFGQGDLVYPILIAVITRELGPIL 108

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA ++  RSG+AI  EIG+M ++ EI+A    G+D +  L+ PR    I+++ LL +  N
Sbjct: 109 TAFIVTARSGTAIATEIGTMVVSHEIEAYMAFGIDPISYLVVPRFLGAIVAVTLLNVYFN 168

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              ++G+  V    + I FA +F          +I + L+K+      I +V    GF V
Sbjct: 169 IFGLLGSFFVTSLIHPIQFAEYFHNLLLRLKPVDILSSLVKSATFGAVIALVGTYSGFQV 228

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              S  + +     V +     I+ D+L  + Y+
Sbjct: 229 ERASTEIPQVAIKAVGKGFVYCIVADALLTLVYY 262


>gi|56751145|ref|YP_171846.1| putative ABC transporter permease [Synechococcus elongatus PCC
           6301]
 gi|81299189|ref|YP_399397.1| hypothetical protein Synpcc7942_0378 [Synechococcus elongatus PCC
           7942]
 gi|56686104|dbj|BAD79326.1| putative ABC transporter permease protein [Synechococcus elongatus
           PCC 6301]
 gi|81168070|gb|ABB56410.1| Protein of unknown function DUF140 [Synechococcus elongatus PCC
           7942]
          Length = 264

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 104/213 (48%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
            QM  VG S + + +L     GAV   Q A +   FGA      ++++   RE+  +LT 
Sbjct: 42  EQMANVGPSSLLITLLTGVSVGAVFTIQVAREFINFGAGNIVGGILALALFRELAPVLTG 101

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           V++AGR GSA  AEIG+M++ E+IDA+  +  D V  L+ PR  A  + +P+L +     
Sbjct: 102 VVVAGRIGSAFAAEIGTMQVTEQIDALLMLRTDPVDYLVVPRTLACCLMMPILCLGFGLI 161

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            +   S+V    Y IP +VFF    +     ++ + LIKA      +  +    G     
Sbjct: 162 GVTAGSLVAQSAYGIPVSVFFDGIRNFLEPWDVVSSLIKAVIFGWVVAAIGTNWGLTTTG 221

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            +  +G+  T  VV ++ ++ ++D   +   F+
Sbjct: 222 GARGVGESTTGAVVTALLVIFVLDFFLSQLMFS 254


>gi|171462919|ref|YP_001797032.1| protein of unknown function DUF140 [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171192457|gb|ACB43418.1| protein of unknown function DUF140 [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 262

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 121/227 (53%), Gaps = 7/227 (3%)

Query: 150 KGFLLS----LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
            GFLL     +I Q+ +VG     ++ +     G V+  QG + L+++G+E  ++ L+  
Sbjct: 36  SGFLLKRPRLVIDQILFVGNHSFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQ-ALGLLVA 94

Query: 206 LQL-REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264
           L L RE+G ++TA++ AGR+G+++ AEIG MK  E++ A+  M +D +  +I+PR+WA I
Sbjct: 95  LSLTRELGPVITALLFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVDPLGRVIAPRLWAGI 154

Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACA 323
           IS+P+L  +     I+G  +V      +    F+S+      L ++   GLIK+     A
Sbjct: 155 ISMPILATIFTAVGILGGYLVGVPLIGVDSGAFWSQMQGGVDLFSDTGNGLIKSMVYGVA 214

Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  +A+ +G+        + +  T  VV S   V+ +D L     F+
Sbjct: 215 VTFIALYQGYESRPTPEGVSQATTRTVVISSLSVLALDFLLTAMMFS 261


>gi|33594617|ref|NP_882261.1| hypothetical protein BP3758 [Bordetella pertussis Tohama I]
 gi|33564693|emb|CAE44015.1| putative membrane protein [Bordetella pertussis Tohama I]
          Length = 261

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 116/214 (54%), Gaps = 1/214 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q++++G   + ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA
Sbjct: 47  QQVHFIGNYSLLIIAVSGLFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTA 106

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+++ AEIG MK  E++ A+  M +D +R ++ PR W  II++P+L  + +  
Sbjct: 107 LLFAGRAGTSLTAEIGLMKAGEQLSAMEVMAVDPMRRVLVPRFWGGIIAMPVLAAVFSMV 166

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTA-TLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            I+G  IV      +    F+S+  +    L ++  G+IK+      + +VA+ EG+   
Sbjct: 167 GILGGWIVGVLMIGVDAGAFWSQMQNGVDVLDDVLNGVIKSLVFGVTVTLVALYEGWQAR 226

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                +G+  T  VV     V+ +D +     F 
Sbjct: 227 PTPEGVGRATTRTVVVGSLAVLGLDFILTALMFG 260


>gi|307824571|ref|ZP_07654796.1| protein of unknown function DUF140 [Methylobacter tundripaludum
           SV96]
 gi|307734555|gb|EFO05407.1| protein of unknown function DUF140 [Methylobacter tundripaludum
           SV96]
          Length = 260

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 112/217 (51%), Gaps = 3/217 (1%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           L+ QM+ +GV    ++ +     G V+  QG + LS FGAE  S+ +M    L RE+G +
Sbjct: 43  LLNQMHSIGVLSFLIITISGLFVGMVLGLQGYYTLSDFGAEE-SLGVMVAASLVRELGPV 101

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           ++A++ AGR+GSA+ AEIG MK  E++  +  M +D ++ +ISPR  A  +S+PLL  L 
Sbjct: 102 VSALLFAGRAGSALTAEIGLMKATEQLSGMEMMAVDPIKRIISPRFLAGFLSMPLLAALF 161

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGF 333
           +   IIG  +V      +    ++S+  +      +I  G+IK+         +A+ EG+
Sbjct: 162 SAVGIIGGQLVGSGLLGVDEGAYWSQMQAKLDFQDDIINGVIKSIVFGFVASWIALFEGY 221

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                S  + +  T  VV S   ++ +D +     F 
Sbjct: 222 DAIPTSEGVSRATTRTVVNSAFSILGLDFILTTLMFG 258


>gi|171322154|ref|ZP_02911012.1| protein of unknown function DUF140 [Burkholderia ambifaria MEX-5]
 gi|171092530|gb|EDT37852.1| protein of unknown function DUF140 [Burkholderia ambifaria MEX-5]
          Length = 255

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 118/214 (55%), Gaps = 1/214 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q++++G     ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA
Sbjct: 42  KQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 101

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+++ AEIG MK  E++ A+  M +D V+ +I+PR+WA II++PLL  + N  
Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPVKTVIAPRLWAGIIAMPLLAAIFNAV 161

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            ++G   V      +    F+S+      + A++  G+IK+     A+  +A+ +G+   
Sbjct: 162 GVLGGYFVGVVLIGVDPGAFWSQMQGGVQVWADVGNGVIKSIVFGFAVTFIALFQGYEAK 221

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                + +  T  VV +   V+ +D L     F+
Sbjct: 222 PTPEGVSRATTKTVVFASLAVLGLDFLLTALMFS 255


>gi|170695754|ref|ZP_02886896.1| protein of unknown function DUF140 [Burkholderia graminis C4D1M]
 gi|170139359|gb|EDT07545.1| protein of unknown function DUF140 [Burkholderia graminis C4D1M]
          Length = 259

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 119/214 (55%), Gaps = 1/214 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q+++VG   + ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA
Sbjct: 46  KQIHFVGNYSLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 105

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+++ AEIG MK  E++ A+  M +D V+++++PR+WA IIS+P+L  + +  
Sbjct: 106 LLFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVDPVKVVVAPRLWAGIISMPILAAIFSAV 165

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            I G  +V      +    F+S+      +  ++  G++K+     A+  VA+ +G+   
Sbjct: 166 GIAGGYVVGVLLIGVDAGAFWSQMQGGVDVWRDVGAGVVKSVVFGLAVTFVALFQGYEAR 225

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                + +  T  VV +   V+ +D L     F+
Sbjct: 226 PTPEGVSRATTKTVVYASLAVLGLDFLLTALMFS 259


>gi|196228069|ref|ZP_03126936.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428]
 gi|196227472|gb|EDY21975.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428]
          Length = 260

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 110/212 (51%), Gaps = 1/212 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           ++RQ+  VG     VV++    TGAV+A Q  FQ S+ G +     ++++   RE+  +L
Sbjct: 40  VLRQIVEVGWRSQMVVVVTGGFTGAVLAAQAYFQFSRLGMKSAVGSMVAVSMFRELAPVL 99

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           T +M++GR G+AI AEIG+MK+ E+IDA+R++G+     L+ PR+ AL+ S+PLL     
Sbjct: 100 TGLMVSGRVGAAIAAEIGTMKVTEQIDALRSLGVHPTDYLVVPRVLALLFSMPLLVAECC 159

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             +++   ++     DI  A +       A   ++   L K       I  +A  +G   
Sbjct: 160 AVSVLAGYVLGVHVLDISAAYYVRNMLLYAGPRDLKMALTKGLVFGIVIVFIACHQGLKT 219

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
              +  +G+  T  VV   S+ ++I + F  F
Sbjct: 220 SNGAVGVGRAPTEAVVNG-SLAVLILNFFLTF 250


>gi|33598744|ref|NP_886387.1| hypothetical protein BPP4258 [Bordetella parapertussis 12822]
 gi|33603818|ref|NP_891378.1| hypothetical protein BB4845 [Bordetella bronchiseptica RB50]
 gi|33574874|emb|CAE39537.1| putative membrane protein [Bordetella parapertussis]
 gi|33577943|emb|CAE35208.1| putative membrane protein [Bordetella bronchiseptica RB50]
          Length = 261

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 116/214 (54%), Gaps = 1/214 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q++++G   + ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA
Sbjct: 47  QQVHFIGNYSLLIIAVSGLFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTA 106

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+++ AEIG MK  E++ A+  M +D +R ++ PR W  II++P+L  + +  
Sbjct: 107 LLFAGRAGTSLTAEIGLMKAGEQLSAMEVMAVDPMRRVLVPRFWGGIIAMPVLAAVFSMV 166

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTA-TLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            I+G  IV      +    F+S+  +    L ++  G+IK+      + +VA+ EG+   
Sbjct: 167 GILGGWIVGVLMIGVDAGAFWSQMQNGVDVLDDVLNGVIKSLVFGVTVTLVALYEGWQAR 226

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                +G+  T  VV     V+ +D +     F 
Sbjct: 227 PTPEGVGRATTRTVVVGSLAVLGLDFILTALMFG 260


>gi|258592962|emb|CBE69271.1| toluene transporter subunit: membrane component of ABC superfamily
           [NC10 bacterium 'Dutch sediment']
          Length = 256

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 126/235 (53%), Gaps = 9/235 (3%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCA-SSYKFKGFLLSLIRQMYYVGVSGVPVVI 172
           +G+ ++K +      A  LG    +TG +      KF+     ++ Q+Y++GV    +++
Sbjct: 8   VGRTVLKQVRMMGHMAIFLG----STGLWAVLPPLKFR----RIVSQIYFIGVKSSSIIL 59

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
           L +  +G V+  QG + L +FG+E      + +  +RE+G ++ A+M+A R+GSA  AEI
Sbjct: 60  LTAAFSGMVLGLQGYYTLRKFGSEALLGPAVGLSLIRELGPVMAALMVAARAGSASAAEI 119

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           G M+I E+IDA+  M ++ V+ L+ P++ A +IS+PLLT + +   I G  +V  K   +
Sbjct: 120 GIMRITEQIDALEAMAVNPVKHLVVPKVVAGLISVPLLTAIFDVVGIFGGYLVGVKMLGV 179

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
               +FS   +   +++I  G +K+      +  V   +GF  G  +  +GK  T
Sbjct: 180 GAGTYFSEMRNMVEMSDIQGGFLKSLSFGLIVTWVCTYKGFYTGYGAEGVGKATT 234


>gi|186477517|ref|YP_001858987.1| hypothetical protein Bphy_2769 [Burkholderia phymatum STM815]
 gi|184193976|gb|ACC71941.1| protein of unknown function DUF140 [Burkholderia phymatum STM815]
          Length = 255

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 119/214 (55%), Gaps = 1/214 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q+++VG   + ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA
Sbjct: 42  KQIHFVGNYSLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 101

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+++ AEIG MK  E++ A+  M +D ++++++PR+WA II++P+L  + +  
Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVDPLKVVVAPRMWAGIIAMPVLAAIFSAV 161

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTA-TLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            +IG  IV      +    F+S+         ++  G+IK+     A+  +A+ +G+   
Sbjct: 162 GVIGGYIVGVLMIGVDAGAFWSQMQGGVDAYRDVGNGVIKSIVFGFAVTFIALYQGYEAK 221

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                + +  T  VV +   V+ +D L     F+
Sbjct: 222 PTPEGVSRATTKTVVYASLAVLGLDFLLTALMFS 255


>gi|115350388|ref|YP_772227.1| hypothetical protein Bamb_0333 [Burkholderia ambifaria AMMD]
 gi|172059407|ref|YP_001807059.1| hypothetical protein BamMC406_0342 [Burkholderia ambifaria MC40-6]
 gi|115280376|gb|ABI85893.1| protein of unknown function DUF140 [Burkholderia ambifaria AMMD]
 gi|171991924|gb|ACB62843.1| protein of unknown function DUF140 [Burkholderia ambifaria MC40-6]
          Length = 255

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 118/214 (55%), Gaps = 1/214 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q++++G     ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA
Sbjct: 42  KQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 101

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+++ AEIG MK  E++ A+  M +D ++ +I+PR+WA II++PLL  + N  
Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPIKTVIAPRLWAGIIAMPLLAAIFNAV 161

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            ++G   V      +    F+S+      + A++  G+IK+     A+  +A+ +G+   
Sbjct: 162 GVLGGYFVGVVLIGVDPGAFWSQMQGGVQVWADVGNGVIKSIVFGFAVTFIALFQGYEAK 221

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                + +  T  VV +   V+ +D L     F+
Sbjct: 222 PTPEGVSRATTKTVVFASLAVLGLDFLLTALMFS 255


>gi|328952205|ref|YP_004369539.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM
           11109]
 gi|328452529|gb|AEB08358.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM
           11109]
          Length = 255

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 129/257 (50%), Gaps = 9/257 (3%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVSGVPVVI 172
           +G+  V F+ +    A    L+++  G +     Y+++ F     RQ+ ++GV    +V+
Sbjct: 7   LGRLWVHFLQELGGMA----LLLAQAGLWLPRRPYRWRHFF----RQLEFIGVKSFFIVV 58

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
           L    TG V+A Q  +   +FG E      +++   RE+G +LT++M+A R+GSA+ AE+
Sbjct: 59  LTGLFTGMVLALQAYYGFRKFGGESLLGGAVALSMTRELGPVLTSLMVAARAGSAMAAEL 118

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           G+MK+ E++DA+  M +  V  L  PR+ A +I  PLLT++A +  I+G   V     D+
Sbjct: 119 GAMKVTEQVDALLAMAVQPVHYLALPRLLAAVIMTPLLTVIAVYIGIVGGYFVGVILLDV 178

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
               F  +       ++++ GL K+      + +++  EG      +  +G   T  VV 
Sbjct: 179 NPGTFMQKMLEMVNSSDLYNGLFKSVIFGLLLALISCYEGLQAKGGAEGVGLVTTRAVVY 238

Query: 353 SISIVIIIDSLFAIFYF 369
           S   ++I D +     F
Sbjct: 239 SAISILIADYILTALLF 255


>gi|218439944|ref|YP_002378273.1| hypothetical protein PCC7424_3003 [Cyanothece sp. PCC 7424]
 gi|218172672|gb|ACK71405.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7424]
          Length = 264

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 105/202 (51%), Gaps = 8/202 (3%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ----FGAEIFSIDLMSILQLREIG 212
           + QM  VG    P  + IS VT A +      Q+S+    FGA  +   ++S+   RE+ 
Sbjct: 43  LDQMAIVG----PESLTISLVTAAFVGMVFTIQVSREFIYFGAGSYVGGVLSLALTRELA 98

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            +LTAV++AGR GSA  AEIG+M++ E+IDA+  +  D +  L+ PR+ A  + LP+LT+
Sbjct: 99  PVLTAVVVAGRVGSAFAAEIGTMRVTEQIDALYMLKTDPIDYLVIPRVLACSLMLPILTV 158

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           L+  + I G   V    Y+I   VF +   +     ++ + +IK+      I ++    G
Sbjct: 159 LSLLTGIAGGIAVAESLYNISPVVFLNSARNFLQTWDLVSCMIKSGIFGSLIAVIGCSWG 218

Query: 333 FAVGVHSNSLGKKVTTCVVQSI 354
                 +  +G+  TT VV ++
Sbjct: 219 LTTSGGAKGVGQSTTTAVVTAL 240


>gi|78223740|ref|YP_385487.1| hypothetical protein Gmet_2543 [Geobacter metallireducens GS-15]
 gi|78194995|gb|ABB32762.1| protein of unknown function DUF140 [Geobacter metallireducens
           GS-15]
          Length = 253

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 97/163 (59%), Gaps = 2/163 (1%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I Q+  +GV  + +V L    TG V+A Q   QL  F A  +   ++++  ++E+G +L+
Sbjct: 39  ITQLDKMGVGSLFIVCLTGLFTGMVMALQALIQLKPFAATSYVGGMVAVTMVKELGPVLS 98

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           ++M+AGR GS+I AE+G+M + E++DA+R  G D +  L++ R+ A+++++PLL ++ + 
Sbjct: 99  SLMVAGRVGSSITAELGTMVVTEQVDAMRVEGTDIITRLVTSRLKAMLVAMPLLAVVTDA 158

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319
            A++G   VI   YDI   +++          ++  G+ K PF
Sbjct: 159 LALLGGY-VIASGYDINLLMYWKSLSQFMVFQDLVEGVAK-PF 199


>gi|300871878|ref|YP_003786751.1| ABC transporter permease-like protein [Brachyspira pilosicoli
           95/1000]
 gi|300689579|gb|ADK32250.1| ABC-type transport system permease protein-like protein
           [Brachyspira pilosicoli 95/1000]
          Length = 268

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 116/221 (52%), Gaps = 6/221 (2%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF--GAEIFSIDLM 203
           S+ FK     L  Q+  +GV    V  +    TG V++ Q A  L     G   F   ++
Sbjct: 43  SFSFK----LLTDQIVRMGVESFIVAAVTVLCTGMVMSLQIAVVLDSVLKGISQFVGSMV 98

Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263
               ++E+  +L A++ AGR GS++ AEIG+M+++E++DA++T+  + +  +  PR WA 
Sbjct: 99  GKAMVKELSPMLLALIFAGRVGSSVTAEIGTMQVSEQLDALKTLYTNPIEYVAVPRFWAA 158

Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323
           +ISLP+LT+ A+   ++G ++V     +   A++F R  +  +L +    LIK+      
Sbjct: 159 VISLPMLTVSADIIGVLGGAVVTVFVLNNDPAIYFDRAIAVISLGDFIGSLIKSTIFGAE 218

Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           + +++   GF     +  +GK  T  VV S  +++I D L 
Sbjct: 219 VILISCFYGFRTNGGAEGVGKATTISVVYSFMLILITDYLL 259


>gi|222055776|ref|YP_002538138.1| protein of unknown function DUF140 [Geobacter sp. FRC-32]
 gi|221565065|gb|ACM21037.1| protein of unknown function DUF140 [Geobacter sp. FRC-32]
          Length = 257

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 116/212 (54%), Gaps = 4/212 (1%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA-EIFSIDLMSILQLREIGVL 214
           L +Q+Y+ G+  + V+++IS   G VI  Q    +S  GA E  +  ++  + +RE+G +
Sbjct: 45  LRKQIYFTGLESLKVIVIISVTIGIVIITQ---IISLVGANETLTGRVLVWVIIRELGPV 101

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           LTA++I  RSG+AI  E+G MKIN EI++I ++G+   R LI PRI  +  S+ +LTI  
Sbjct: 102 LTAIIIIARSGTAIATELGYMKINNEIESIESLGIPADRYLIMPRIIGVTTSVVILTIYF 161

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
             +AI+G  IV    + +PF  F     S  T+  +    IK+ F    +     + G  
Sbjct: 162 EIAAILGGFIVAAIGWHVPFDKFAQSIFSILTIKELGMSFIKSLFFGLFLSAACCRHGLG 221

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           VG  +  + +  T  V+QS+ +V ++D +  +
Sbjct: 222 VGKSATQIPQAATKGVMQSLFLVFVLDGVITL 253


>gi|107024236|ref|YP_622563.1| hypothetical protein Bcen_2692 [Burkholderia cenocepacia AU 1054]
 gi|116688439|ref|YP_834062.1| hypothetical protein Bcen2424_0415 [Burkholderia cenocepacia
           HI2424]
 gi|206558708|ref|YP_002229468.1| hypothetical protein BCAL0302 [Burkholderia cenocepacia J2315]
 gi|105894425|gb|ABF77590.1| protein of unknown function DUF140 [Burkholderia cenocepacia AU
           1054]
 gi|116646528|gb|ABK07169.1| protein of unknown function DUF140 [Burkholderia cenocepacia
           HI2424]
 gi|198034745|emb|CAR50612.1| putative membrane protein [Burkholderia cenocepacia J2315]
          Length = 255

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 118/214 (55%), Gaps = 1/214 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q++++G     ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA
Sbjct: 42  KQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 101

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+++ AEIG MK  E++ A+  M +D ++ +I+PR+WA II++PLL  + N  
Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPIKNVIAPRMWAGIIAMPLLAAIFNAV 161

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            ++G   V      +    F+S+      + A++  G+IK+     A+  +A+ +G+   
Sbjct: 162 GVLGGYFVGVVLIGVDPGAFWSQMQGGVQVWADVGNGVIKSIVFGFAVTFIALYQGYEAK 221

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                + +  T  VV +   V+ +D L     F+
Sbjct: 222 PTPEGVSRATTKTVVFASLAVLGLDFLLTALMFS 255


>gi|330430336|gb|AEC21670.1| hypothetical protein PT7_3130 [Pusillimonas sp. T7-7]
          Length = 262

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 116/214 (54%), Gaps = 1/214 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q++++G   + ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA
Sbjct: 48  QQIHFIGNYSLLIIAVSGLFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTA 107

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+++ AEIG MK  E+I A+  M +D +R +++PR W  ++++P+L  + +  
Sbjct: 108 LLFAGRAGTSLTAEIGLMKAGEQIAAMEVMAVDPIRRVLAPRFWGGVVAMPVLAAVFSMV 167

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            IIG  IV      I    F+S+      +  ++  G +K+     A+ ++A+  G+   
Sbjct: 168 GIIGGWIVGVVLIGIDPGAFWSQMQGGVDVFKDVLNGFVKSVVFGVAVTLIALHAGWTAK 227

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                + +  T  VV    +V+ +D +     F+
Sbjct: 228 ATPEGVSRATTRTVVSGSLMVLGLDFILTALMFS 261


>gi|166363947|ref|YP_001656220.1| hypothetical protein MAE_12060 [Microcystis aeruginosa NIES-843]
 gi|166086320|dbj|BAG01028.1| hypothetical protein MAE_12060 [Microcystis aeruginosa NIES-843]
          Length = 264

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 104/198 (52%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + QM  VG   + + ++ +   G V   Q A +   FGA  F   ++S+   RE+  +LT
Sbjct: 43  LEQMSIVGPESLTIALITAAFVGMVFTIQVAREFIFFGAGSFVGGVLSLALTRELAPVLT 102

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV++AGR GSA  AEIG+M++ E+IDA+  +  D +  L+ PR+ A  + LPLLTI++  
Sbjct: 103 AVVVAGRVGSAFAAEIGTMRVTEQIDALYILKTDPIDYLVIPRVIACSLMLPLLTIISLV 162

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           + ++G   +    Y I +++F     +     ++ + ++K+      I I+    G    
Sbjct: 163 TGLLGGLFISDSLYGISYSLFLQSAQNFLETWDLISSMLKSLIFGVLIAIIGCSWGLTTT 222

Query: 337 VHSNSLGKKVTTCVVQSI 354
             +  +G+  TT VV S+
Sbjct: 223 GGAKGVGQSTTTAVVTSL 240


>gi|254253460|ref|ZP_04946778.1| ABC-type organic solvent resistance transport system permease
           protein [Burkholderia dolosa AUO158]
 gi|124896069|gb|EAY69949.1| ABC-type organic solvent resistance transport system permease
           protein [Burkholderia dolosa AUO158]
          Length = 255

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 119/214 (55%), Gaps = 1/214 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q++++G     ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA
Sbjct: 42  KQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 101

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+++ AEIG MK  E++ A+  M +D ++ +I+PR+WA II++PLL  + N  
Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPIKNVIAPRMWAGIIAMPLLAAIFNAV 161

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            ++G   V      +    F+S+  S   + A++  G++K+     A+  +A+ +G+   
Sbjct: 162 GVLGGYFVGVVLIGVDPGAFWSQMQSGVQVWADVGNGVLKSIVFGFAVTFIALFQGYEAK 221

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                + +  T  VV +   V+ +D L     F+
Sbjct: 222 PTPEGVSRATTKTVVFASLAVLGLDFLLTALMFS 255


>gi|134294506|ref|YP_001118241.1| hypothetical protein Bcep1808_0394 [Burkholderia vietnamiensis G4]
 gi|134137663|gb|ABO53406.1| protein of unknown function DUF140 [Burkholderia vietnamiensis G4]
          Length = 255

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 118/214 (55%), Gaps = 1/214 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q++++G     ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA
Sbjct: 42  KQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 101

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+++ AEIG MK  E++ A+  M +D ++ +I+PR+WA II++PLL  + N  
Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPLKTVIAPRLWAGIIAMPLLAAIFNAV 161

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            ++G   V      +    F+S+      + A++  G+IK+     A+  +A+ +G+   
Sbjct: 162 GVLGGYFVGVVLIGVDPGAFWSQMQGGVEVWADVGNGVIKSIVFGFAVTFIALFQGYEAK 221

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                + +  T  VV +   V+ +D L     F+
Sbjct: 222 PTPEGVSRATTKTVVFASLAVLGLDFLLTALMFS 255


>gi|58040555|ref|YP_192519.1| ABC transporter permease protein [Gluconobacter oxydans 621H]
 gi|58002969|gb|AAW61863.1| ABC transporter permease protein [Gluconobacter oxydans 621H]
          Length = 387

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 110/204 (53%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +V +++F+ GA++A  GA +L +F A I+   L+ I  +RE+  ++TA+++AGR+G A  
Sbjct: 184 IVGIVNFLIGAILAFVGAVELQKFAAGIYVASLVGIAMVREMAAVMTAIIMAGRTGGAYA 243

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A I +M+ NEEIDA+   G+     LI P + +LII++P L +      ++G  +V    
Sbjct: 244 ARISTMQGNEEIDALNVFGIPTSTYLILPAVLSLIITMPFLYLYGCLIGMLGGFVVAISM 303

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            DI  A +F +  +   +     G  K+      IG+ + + G   G  +  +G   T  
Sbjct: 304 LDITAAGYFHQTVTAFGIGQFIFGFTKSLVFGAFIGLTSCRIGLKAGRSAADVGIAATRA 363

Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373
           VV  I  VI ID++FA+    +GI
Sbjct: 364 VVVGIVGVIAIDAIFAVIADVLGI 387


>gi|307634769|gb|ADI83773.2| transporter membrane protein of unknown function DUF140 [Geobacter
           sulfurreducens KN400]
          Length = 256

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 95/157 (60%), Gaps = 2/157 (1%)

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           +GV  + ++ L    TG V+A Q   QL  F A  +   ++++  ++E+G +L+++M+AG
Sbjct: 48  MGVGSLFIICLTGLFTGMVMALQALIQLKPFAATSYVGGMVAVTMVKELGPVLSSLMVAG 107

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           R GS+I AE+G+M + E++DA+R  G D V  L++ R+ AL++++P+L ++ +  A++G 
Sbjct: 108 RVGSSITAELGTMVVTEQVDAMRVEGTDIVSRLVTSRLKALMLAMPMLALVTDAVALLGG 167

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319
            I I   YDI   +++          ++  G++K PF
Sbjct: 168 YI-IAAGYDINLLMYWKSLPQFMVFQDLIEGVMK-PF 202


>gi|161523498|ref|YP_001578510.1| hypothetical protein Bmul_0318 [Burkholderia multivorans ATCC
           17616]
 gi|189351729|ref|YP_001947357.1| putative ABC transporter permease [Burkholderia multivorans ATCC
           17616]
 gi|221201636|ref|ZP_03574674.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           multivorans CGD2M]
 gi|221207289|ref|ZP_03580299.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           multivorans CGD2]
 gi|221213427|ref|ZP_03586402.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           multivorans CGD1]
 gi|160340927|gb|ABX14013.1| protein of unknown function DUF140 [Burkholderia multivorans ATCC
           17616]
 gi|189335751|dbj|BAG44821.1| putative ABC transport system permease protein [Burkholderia
           multivorans ATCC 17616]
 gi|221166879|gb|EED99350.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           multivorans CGD1]
 gi|221172877|gb|EEE05314.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           multivorans CGD2]
 gi|221178452|gb|EEE10861.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           multivorans CGD2M]
          Length = 255

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 118/214 (55%), Gaps = 1/214 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q++++G     ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA
Sbjct: 42  KQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 101

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+++ AEIG MK  E++ A+  M +D ++ +I+PR+WA II++PLL  + N  
Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPIKTVIAPRMWAGIITMPLLAAIFNAV 161

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            ++G   V      +    F+S+      + A++  G++K+     A+  +A+ +G+   
Sbjct: 162 GVLGGYFVGVVLIGVDPGAFWSQMQGGVEVWADVGNGVLKSIVFGFAVTFIALFQGYEAK 221

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                + +  T  VV +   V+ +D L     F+
Sbjct: 222 PTPEGVSRATTKTVVFASLAVLGLDFLLTALMFS 255


>gi|238758308|ref|ZP_04619486.1| hypothetical protein yaldo0001_1950 [Yersinia aldovae ATCC 35236]
 gi|238703431|gb|EEP95970.1| hypothetical protein yaldo0001_1950 [Yersinia aldovae ATCC 35236]
          Length = 208

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 104/195 (53%), Gaps = 5/195 (2%)

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G V+  QG   L+ + AE     ++S+  LRE+G ++TA++ AGR+GSA+ AEIG MK  
Sbjct: 15  GMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKAT 74

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI--VIWKYYDIPFAV 296
           E+I ++  M +D +R +++PR WA +IS+PLLT +     I G S+  V WK  D  F  
Sbjct: 75  EQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDAGF-- 132

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   +      ++   LIK+   A  +  +A+  G+     S  + +  T  VV S  
Sbjct: 133 FWSAMQNAVEWRTDLLNCLIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSL 192

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 193 AVLGLDFVLTALMFG 207


>gi|148264681|ref|YP_001231387.1| hypothetical protein Gura_2637 [Geobacter uraniireducens Rf4]
 gi|146398181|gb|ABQ26814.1| protein of unknown function DUF140 [Geobacter uraniireducens Rf4]
          Length = 401

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 120/220 (54%)

Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
           + LI  +   G   +P+V LIS + G ++A   + QL  FGA+I+  D++ I  +R +G 
Sbjct: 182 MDLIVTIQETGAQALPIVTLISLLVGMILAFIASIQLKMFGAQIYVADVVGIGIVRVMGA 241

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           ++T ++++GR+G+A  A++G+M++NEEIDA+ T+G   V  L+ PR+ AL++ +PLL + 
Sbjct: 242 IMTGIIMSGRTGAAFAAQLGTMQVNEEIDALETLGFSPVEFLVLPRMLALMLMMPLLCVY 301

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
           ++   ++G  IV     D+ F  +  +  S   L +   GL  +      + +     G 
Sbjct: 302 SDLMGVLGGMIVGVGMLDLGFMEYVHQSRSALNLTHFLVGLFHSFVFGILVAVAGCLRGL 361

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
                ++++G   T+ VV  I  +++  ++  +    +GI
Sbjct: 362 QCERSASAVGYAATSAVVTGIVCIVVATAIITLSCQVLGI 401


>gi|78064990|ref|YP_367759.1| ABC transporter, inner membrane subunit [Burkholderia sp. 383]
 gi|77965735|gb|ABB07115.1| ABC transporter, inner membrane subunit [Burkholderia sp. 383]
          Length = 255

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 118/214 (55%), Gaps = 1/214 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q++++G     ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA
Sbjct: 42  KQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 101

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+++ AEIG MK  E++ A+  M +D ++ +I+PR+WA II++PLL  + N  
Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPIKNVIAPRMWAGIIAMPLLAAIFNAV 161

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            ++G   V      +    F+S+      + A++  G++K+     A+  +A+ +G+   
Sbjct: 162 GVLGGYFVGVVLIGVDPGAFWSQMQGGVQVWADVGNGVLKSIVFGFAVTFIALYQGYEAK 221

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                + +  T  VV +   V+ +D L     F+
Sbjct: 222 PTPEGVSRATTKTVVFASLAVLGLDFLLTALMFS 255


>gi|83945272|ref|ZP_00957621.1| ABC transporter, permease protein, putative [Oceanicaulis
           alexandrii HTCC2633]
 gi|83851442|gb|EAP89298.1| ABC transporter, permease protein, putative [Oceanicaulis
           alexandrii HTCC2633]
          Length = 255

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 101/178 (56%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G+  A+  +   F   L++Q++ +G   +PVV L +  TGA +A       S+F AE F 
Sbjct: 26  GQALAALVRPPYFGGQLVQQIFKIGFLSLPVVGLTALFTGAALALNIYTGGSRFNAESFV 85

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
            +++++  +RE+G ++ A+M+AGR  S I AEIG+M+  E+IDA+ T+  D +R LI+PR
Sbjct: 86  PNIVAMGIVRELGPVIAALMLAGRVSSGIAAEIGAMRATEQIDALHTLATDPMRYLIAPR 145

Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
           + A ++ LP+L   A+   I G  +V     D    ++        +  +I +GLIKA
Sbjct: 146 VLAGVLVLPILVATADIIGIYGGYLVSVHTLDFNPTIYVRNTWDFLSDWDIISGLIKA 203


>gi|126668782|ref|ZP_01739730.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Marinobacter sp. ELB17]
 gi|126626765|gb|EAZ97414.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Marinobacter sp. ELB17]
          Length = 259

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 127/239 (53%), Gaps = 15/239 (6%)

Query: 138 NTGEFCASSYKFKGFLLS--------------LIRQMYYVGVSGVPVVILISFVTGAVIA 183
           NT +F AS  +   FLL               L++Q+Y VGV  + +V++     G V+ 
Sbjct: 10  NTLDFLASFGRASQFLLGVLVGVPKPSVGLPLLLKQIYSVGVLSLVIVVVSGLFIGMVLG 69

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
            QG   LS FG+E     ++++  +RE+G ++TA++ AGR+GSA+ AEIG MK  E++ +
Sbjct: 70  LQGYTILSDFGSESAIGQMIALTLVRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSS 129

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG+D +R +I+PR+WA  +S+P+L ++ +   I+G  +V  ++  +    F+    +
Sbjct: 130 MEMMGVDPLRRVIAPRLWAGFLSMPILALVFSMVGILGGMLVGVEWLGVFEGSFWGNMQA 189

Query: 304 TATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           +     ++  G+IK+         +A+ +G+     S  +    T  VV S   V+ +D
Sbjct: 190 SVDFRDDVLNGVIKSVVFGFVCAWIAVYQGYDCVPTSAGISSATTKTVVYSSLAVLGLD 248


>gi|170731749|ref|YP_001763696.1| hypothetical protein Bcenmc03_0394 [Burkholderia cenocepacia MC0-3]
 gi|254246538|ref|ZP_04939859.1| hypothetical protein BCPG_01288 [Burkholderia cenocepacia PC184]
 gi|124871314|gb|EAY63030.1| hypothetical protein BCPG_01288 [Burkholderia cenocepacia PC184]
 gi|169814991|gb|ACA89574.1| protein of unknown function DUF140 [Burkholderia cenocepacia MC0-3]
          Length = 255

 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 118/214 (55%), Gaps = 1/214 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q++++G     ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA
Sbjct: 42  KQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 101

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+++ AEIG MK  E++ A+  M +D ++ +I+PR+WA II++PLL  + N  
Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPIKNVIAPRMWAGIIAMPLLAAIFNAV 161

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            ++G   V      +    F+S+      + A++  G++K+     A+  +A+ +G+   
Sbjct: 162 GVLGGYFVGVVLIGVDPGAFWSQMQGGVQVWADVGNGVLKSIVFGFAVTFIALYQGYEAK 221

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                + +  T  VV +   V+ +D L     F+
Sbjct: 222 PTPEGVSRATTKTVVFASLAVLGLDFLLTALMFS 255


>gi|254497755|ref|ZP_05110528.1| toluene tolerance protein Ttg2B [Legionella drancourtii LLAP12]
 gi|254353048|gb|EET11810.1| toluene tolerance protein Ttg2B [Legionella drancourtii LLAP12]
          Length = 260

 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 115/209 (55%), Gaps = 1/209 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L  Q+Y+VGV    ++++ +   G V+  QG   L +FGA      L+++   RE+G ++
Sbjct: 43  LCHQIYFVGVLSCLIIVVSALFIGMVVGLQGYNTLQKFGASSQLGQLLALSISRELGPVI 102

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           +A++ AGR+GSA+ AEIG MK  E++ ++  MG+D +  +I PR  A  I+LP+L+++ +
Sbjct: 103 SALLFAGRAGSALTAEIGLMKTTEQLSSMDMMGVDPLGRVIYPRFMAGFITLPVLSLIFS 162

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
             AI+G   +   +  +    F+S   +      ++ +G+IK+   A  +  +A+ +GF 
Sbjct: 163 AVAILGGYFIGVHWLGVDAGSFWSNMQAAVNFRIDVLSGIIKSLVFAFVVTWIAVFQGFE 222

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
               +  + +  T  VV S   V+ +D L
Sbjct: 223 CVPTAEGISQATTKTVVYSSLAVLGLDFL 251


>gi|170703432|ref|ZP_02894205.1| protein of unknown function DUF140 [Burkholderia ambifaria
           IOP40-10]
 gi|170131663|gb|EDT00218.1| protein of unknown function DUF140 [Burkholderia ambifaria
           IOP40-10]
          Length = 255

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 118/214 (55%), Gaps = 1/214 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q++++G     ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA
Sbjct: 42  KQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 101

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ +GR+G+++ AEIG MK  E++ A+  M +D ++ +I+PR+WA II++PLL  + N  
Sbjct: 102 LLFSGRAGTSLTAEIGLMKAGEQLTALEMMAVDPIKTVIAPRLWAGIIAMPLLAAIFNAV 161

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            ++G   V      +    F+S+      + A++  G+IK+     A+  +A+ +G+   
Sbjct: 162 GVLGGYFVGVVLIGVDPGAFWSQMQGGVQVWADVGNGVIKSIVFGFAVTFIALFQGYEAK 221

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                + +  T  VV +   V+ +D L     F+
Sbjct: 222 PTPEGVSRATTKTVVFASLAVLGLDFLLTALMFS 255


>gi|71909013|ref|YP_286600.1| hypothetical protein Daro_3401 [Dechloromonas aromatica RCB]
 gi|71848634|gb|AAZ48130.1| Protein of unknown function DUF140 [Dechloromonas aromatica RCB]
          Length = 263

 Score = 92.4 bits (228), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 123/226 (54%), Gaps = 2/226 (0%)

Query: 145 SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204
           S   F+   L+L R++Y+ GV  + ++++     G V+  QG   L +FG+      L++
Sbjct: 36  SGSSFRRLPLTL-REIYFSGVLSLLIIMVSGLFVGLVLGLQGYEILQRFGSTEALGTLVA 94

Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264
           +   RE+G +L A+  A R+GS++ AEIG MK  E++ A+  M ++ +  +++PR W  +
Sbjct: 95  LSLTRELGPVLAAIFFASRAGSSVTAEIGLMKATEQLKAMDMMAVNPIARVVAPRFWGGV 154

Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACA 323
           IS+PLL  + +   ++G  ++   +  +    ++S+  ++     +I+ G++K+     A
Sbjct: 155 ISMPLLAAIFSAMGVLGGWLIGVVFIGVDDGAYWSQMQASVDFRYDIWNGVVKSFVFGIA 214

Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           + ++A+ EG+     +  + + +T  VV S+  V+ +D +   F F
Sbjct: 215 VSLIAVFEGYDSVPTAEGVSRAITRTVVTSVLTVLALDFVLTSFMF 260


>gi|162451968|ref|YP_001614335.1| putative ABC transport system permease protein [Sorangium
           cellulosum 'So ce 56']
 gi|161162550|emb|CAN93855.1| putative ABC transport system permease protein [Sorangium
           cellulosum 'So ce 56']
          Length = 296

 Score = 92.4 bits (228), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 116/206 (56%), Gaps = 1/206 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +R +Y +GV  +P+V++ +  TGA++  Q A  + +FGA            LREI  LLT
Sbjct: 83  MRNLYRMGVKSMPIVVVTALFTGAIMVIQAAPLVERFGAHGLLGWGAGFGTLREIAPLLT 142

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A+MI GR G+   AE+G+M + E+IDA+R + +D V  LI+PR  A++++L L  I A+ 
Sbjct: 143 ALMINGRVGANNTAELGTMVVTEQIDALRVLAIDPVSFLIAPRFLAMVLTLLLSVIFADA 202

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHST-ATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
            A++GA++       +  AVF++   S    + ++ +GL+K+      + + + + G  V
Sbjct: 203 LALLGAALTGDLLLGVAPAVFYNGLTSGLLDIGDVMSGLVKSVVFGVVLALSSCQYGLGV 262

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361
              +  +G+ V   VV S + + I+D
Sbjct: 263 TGGAPGVGRAVNATVVASAAGIFILD 288


>gi|330991860|ref|ZP_08315809.1| putative ABC transporter permease protein [Gluconacetobacter sp.
           SXCC-1]
 gi|329760881|gb|EGG77376.1| putative ABC transporter permease protein [Gluconacetobacter sp.
           SXCC-1]
          Length = 382

 Score = 92.4 bits (228), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 110/204 (53%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +V +++F+ GA++A  G+ +L +F A+I+   L++I  +RE+  ++TA+++AGR+G A  
Sbjct: 179 IVGVVNFLVGAILAFVGSVELHKFAADIYVASLVAIAMVREMSAVMTAIIMAGRTGGAYA 238

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A I +M+ NEEIDA++  G+     LI P + AL  ++PLL +      ++G  +V +  
Sbjct: 239 ARISTMQANEEIDALQVFGIPVASYLILPSVLALGFTMPLLYLYGCLIGMLGGFVVSFIM 298

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
             +    +F        L     G IK+      +G+ + + G   G  +  +G   T  
Sbjct: 299 LHVSPLGYFHETLQALPLDQFTFGFIKSLVFGTFVGLTSCRIGLKAGRSAADVGIAATKA 358

Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373
           VV  I  VI +D++FA+    IGI
Sbjct: 359 VVVGIVGVIALDAVFAVIANVIGI 382


>gi|241762420|ref|ZP_04760498.1| protein of unknown function DUF140 [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|241373014|gb|EER62672.1| protein of unknown function DUF140 [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 273

 Score = 92.4 bits (228), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 108/211 (51%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           + + +G + +PVV L +  TG+ +AQQ     S+F A+      + I  +RE+G +L  +
Sbjct: 62  EFFEIGWNSLPVVALTAVFTGSALAQQVYAAASRFSAQSTVPAAVVIGMVRELGPVLVGL 121

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           M+ GR  SAI AE+G+M++ E+IDA+ T+  D  R L++PR++A  ++LP L +LAN   
Sbjct: 122 MVVGRVTSAIAAELGAMRVTEQIDAMETLHTDPYRYLLAPRLYAATLALPFLVMLANVIG 181

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           I G  ++           +           ++   L+K+      + ++    GF     
Sbjct: 182 IFGGYLLSISKLGFNPENYLKVTREFLKAEDVHMALVKSTVFGFLVALLGCYNGFFATGG 241

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           +  +G+  T  VV +  +++  + +  +F+F
Sbjct: 242 AAGVGRSTTRAVVSAFIMILFSNLMITMFFF 272


>gi|226329328|ref|ZP_03804846.1| hypothetical protein PROPEN_03233 [Proteus penneri ATCC 35198]
 gi|225202514|gb|EEG84868.1| hypothetical protein PROPEN_03233 [Proteus penneri ATCC 35198]
          Length = 180

 Score = 92.4 bits (228), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 49/119 (41%), Positives = 81/119 (68%), Gaps = 2/119 (1%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           L++Q+Y VGV  + ++++     G V+  QG   L+ F AE  S+ +M  L L RE+G +
Sbjct: 43  LLKQLYNVGVQSLLIIMVSGLFIGMVLGLQGYLVLTTFSAEA-SLGMMVALSLLRELGPV 101

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           +TA++ AGR+GSA+ AEIG MK  E+I ++  M +D +R +++PR WA +IS+PLL+++
Sbjct: 102 VTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLRRVVAPRFWAGLISMPLLSLI 160


>gi|270159893|ref|ZP_06188549.1| toluene tolerance protein Ttg2B [Legionella longbeachae D-4968]
 gi|289165353|ref|YP_003455491.1| toluene transporter subunit: membrane component of ABC superfamily
           [Legionella longbeachae NSW150]
 gi|269988232|gb|EEZ94487.1| toluene tolerance protein Ttg2B [Legionella longbeachae D-4968]
 gi|288858526|emb|CBJ12407.1| toluene transporter subunit: membrane component of ABC superfamily
           [Legionella longbeachae NSW150]
          Length = 260

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 117/213 (54%), Gaps = 2/213 (0%)

Query: 153 LLSLIR-QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211
           L SL+R Q+Y+VGV    ++I+ +   G V+  QG   L +FGA      L+++   RE+
Sbjct: 39  LWSLVRYQIYFVGVLSCLIIIVSALFIGMVVGLQGYNTLQKFGASSQLGQLLALSISREL 98

Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271
           G +++A++ AGR+GSA+ AEIG MK  E++ ++  MG+D +  +I PR  A  I+LPLL 
Sbjct: 99  GPVISALLFAGRAGSALTAEIGLMKATEQLSSMDMMGVDPLGRVIYPRFLAGFIALPLLA 158

Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMK 330
           ++ +  A+ G   +   +  +    F+S   +      ++ +G+IK+   A  +  +++ 
Sbjct: 159 LIFSAVAVFGGYFIGVHWLGVDAGSFWSNMQAAVDFRIDVLSGIIKSLVFAFVVTWISVF 218

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
           +GF     +  + +  T  VV S   V+ +D L
Sbjct: 219 QGFECVPTAEGISQATTKTVVYSSLAVLGLDFL 251


>gi|260753847|ref|YP_003226740.1| hypothetical protein Za10_1620 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|283856508|ref|YP_163326.2| hypothetical protein ZMO1591 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|258553210|gb|ACV76156.1| protein of unknown function DUF140 [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|283775512|gb|AAV90215.2| protein of unknown function DUF140 [Zymomonas mobilis subsp.
           mobilis ZM4]
          Length = 273

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 108/211 (51%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           + + +G + +PVV L +  TG+ +AQQ     S+F A+      + I  +RE+G +L  +
Sbjct: 62  EFFEIGWNSLPVVALTAVFTGSALAQQVYAAASRFSAQSTVPAAVVIGMVRELGPVLVGL 121

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           M+ GR  SAI AE+G+M++ E+IDA+ T+  D  R L++PR++A  ++LP L +LAN   
Sbjct: 122 MVVGRVTSAIAAELGAMRVTEQIDAMETLHTDPYRYLLAPRLYAATLALPFLVMLANVIG 181

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           I G  ++           +           ++   L+K+      + ++    GF     
Sbjct: 182 IFGGYLLSISKLGFNPENYLKVTREFLKAEDVHMALVKSAVFGFLVALLGCYNGFFATGG 241

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           +  +G+  T  VV +  +++  + +  +F+F
Sbjct: 242 AAGVGRSTTRAVVSAFIMILFSNLMITMFFF 272


>gi|260220241|emb|CBA27582.1| UPF0393 membrane protein HI1086 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 260

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 135/267 (50%), Gaps = 11/267 (4%)

Query: 108 KNLH-YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR-QMYYVGV 165
           K LH   +G  +   + D  + A ++G ++++ G              +L+R Q++++G 
Sbjct: 2   KFLHPAELGFAVRSKLADWGAGARLMGRLVASLGAVLRRP--------ALLRDQIHFMGN 53

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             + ++ +     G V+  Q  + L +FGA      L+S+  +RE G +LTA++ AGR+G
Sbjct: 54  YSLAIIAVSGVFVGFVMGLQYYYGLQRFGAADSVGMLISLSLVREFGPVLTALLFAGRAG 113

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           +++ AEIG MK  E++ A+  M +D V  +++PR W  +I++P+L  + +   ++G  IV
Sbjct: 114 TSLTAEIGLMKAGEQLSAMEMMAVDPVSRILAPRFWGAVIAMPILAAVFSAVGVLGGWIV 173

Query: 286 IWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
                 I    F+S+  S   +  ++  G+IK+     A+  +A+ +GF        + +
Sbjct: 174 SVPMIGIDSGAFWSQMQSGVDVWVDVGNGVIKSVVFGFAVSFIALLQGFEAQPTPEGVAR 233

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFAI 371
             T  VV +   V+ +D +     F+I
Sbjct: 234 ATTRTVVVASLTVLALDFVLTAMMFSI 260


>gi|78485324|ref|YP_391249.1| hypothetical protein Tcr_0980 [Thiomicrospira crunogena XCL-2]
 gi|78363610|gb|ABB41575.1| ATP-binding cassette (ABC) superfamily transporter, permease
           component [Thiomicrospira crunogena XCL-2]
          Length = 261

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 109/199 (54%), Gaps = 1/199 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y+ GV  +P+++      G V++ QG   L  + +E     + ++  LRE+G ++
Sbjct: 46  LVKQVYFSGVLSLPIILTAGLFVGMVLSLQGYNVLVDYNSEEAVGTMTALSLLRELGPVV 105

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ AGR+GSA+ AEIG M+  E++ A+  M +D ++ + SPR  A +I LP+L+++  
Sbjct: 106 AALLFAGRAGSALTAEIGLMRSTEQLSALEMMAIDPLKFVFSPRFTAALIVLPMLSLMFI 165

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G  IV   +  +    F+++ +       ++  G+IK+   A  I I+++ +G+ 
Sbjct: 166 AMGIFGGYIVGVGWLGVDEGAFWTQMNEHVDWNEDVVNGIIKSIAFAVLIAIISLFQGYD 225

Query: 335 VGVHSNSLGKKVTTCVVQS 353
               S  + +  T  VV S
Sbjct: 226 AIPTSEGVSRATTRTVVHS 244


>gi|319942210|ref|ZP_08016526.1| ABC-type transporter [Sutterella wadsworthensis 3_1_45B]
 gi|319804263|gb|EFW01155.1| ABC-type transporter [Sutterella wadsworthensis 3_1_45B]
          Length = 259

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 121/215 (56%), Gaps = 1/215 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +I Q++++G   + ++ +     G V+  QG + L  +G+E     L+++  +RE+G ++
Sbjct: 42  IISQIHFIGNYSLLIISVSGLFVGFVLGLQGYYVLVTYGSEEALGTLVALSLVRELGPVV 101

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+G+A+ AEIG M+  E++ A+  MG+D +R + +PR     IS+P+L ++ +
Sbjct: 102 TALLFAGRAGTALTAEIGLMRSGEQLAAMEMMGVDPIRRVFAPRFIGGFISMPILALIFS 161

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334
              IIGA +V           F+S+  S   + ++I  G +K+     A+ ++A+ +G+A
Sbjct: 162 AVGIIGAWMVGVLLIGTDNGAFWSQMESAVDVFSDICNGFVKSVVFGAAVTLIALYQGWA 221

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
                + + +  TT VV S  +V+ +D +   + F
Sbjct: 222 SRPTPDGVARATTTTVVVSSLLVLGLDFIMTAWMF 256


>gi|113869373|ref|YP_727862.1| ABC-type transporter, permease component involved in toluene
           tolerance [Ralstonia eutropha H16]
 gi|113528149|emb|CAJ94494.1| ABC-type transporter, permease component involved in toluene
           tolerance [Ralstonia eutropha H16]
          Length = 259

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 119/213 (55%), Gaps = 1/213 (0%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           Q+++VG   + ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA+
Sbjct: 46  QVFFVGNLSLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTAL 105

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           + AGR+G+++ AEIG MK  E++ A+  M ++ ++ +I+PR WA +I++P+L  + +   
Sbjct: 106 LFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVNPLQRVIAPRFWAGVIAMPVLAAIFSAVG 165

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           I+G  +V  +   +    F+S+      + A++  G+IK+     A+  +A+ +GF    
Sbjct: 166 ILGGYVVGVQLIGVDAGAFWSQMQGGVDVRADVLNGVIKSFIFGIAVTFIALYQGFEAKP 225

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               + +  T  VV +   V+ +D L     F+
Sbjct: 226 TPEGVSRATTRTVVIASLAVLGLDFLLTALMFS 258


>gi|300865432|ref|ZP_07110232.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300336571|emb|CBN55382.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 274

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 108/217 (49%), Gaps = 8/217 (3%)

Query: 157 IRQMYYVGVSGVPVVILISFVT----GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           + QM  VG    P  +LI+ VT    G V   Q A +    G       ++++   RE+G
Sbjct: 49  LDQMVAVG----PESLLIALVTAGFVGMVFTIQVAREFIALGVTNAVGGVLAVSLARELG 104

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            +LTAV+IAGR GSA  AEIG+M++ E+IDA+  +  D +  L+ PR+ A  + LP+LTI
Sbjct: 105 PVLTAVIIAGRVGSAFAAEIGTMQVTEQIDALYILKTDPIDYLVIPRVIACCLMLPILTI 164

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           L+  + + G  ++  + Y +P  VF     +  T  +I    IKA      I ++    G
Sbjct: 165 LSLVTGMAGGLLIATRMYGVPPVVFLESARNFLTPWDICAPAIKAFVFGALIAVIGTSWG 224

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
                 +  +G+  TT VV S+  + I +   +   F
Sbjct: 225 LTTTGGAKGVGQSTTTAVVTSMLAIFICNFFLSWLMF 261


>gi|148552943|ref|YP_001260525.1| hypothetical protein Swit_0014 [Sphingomonas wittichii RW1]
 gi|148498133|gb|ABQ66387.1| protein of unknown function DUF140 [Sphingomonas wittichii RW1]
          Length = 264

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 120/218 (55%), Gaps = 8/218 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L  Q+  +G   +PVV + +  +GA +AQQ     S+F A      ++ +  +RE+G +L
Sbjct: 50  LFEQLMQIGWFSLPVVGMTAIFSGAALAQQTFTAGSRFNATSTVPAIVVLGIVRELGPVL 109

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
             +M+AGR  SA+ AE+G+M++ E++DA+ T+  D  R LI+PR++A +I++PL+ ++AN
Sbjct: 110 VGLMVAGRVSSAMAAELGTMRVTEQLDALTTLRTDPYRYLIAPRLFAALIAIPLMVLVAN 169

Query: 276 FSAIIGASIVIWKYYDIPF-AVFF---SRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
              I G   V    Y + F AV +   +R   TAT  ++   L+K+ F    I ++    
Sbjct: 170 AIGIFGGYFV--AVYKLGFNAVGYLDTTRQFLTAT--DLQMALVKSAFFGFFIALMGCYH 225

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           GF     +  +G+  T  VV +  ++++ + +  +  F
Sbjct: 226 GFRAQGGAAGVGRATTDAVVSAFILILLSNMIITLMAF 263


>gi|114321371|ref|YP_743054.1| hypothetical protein Mlg_2222 [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227765|gb|ABI57564.1| protein of unknown function DUF140 [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 259

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 115/215 (53%), Gaps = 1/215 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +I+Q+Y VGV  + ++++     G V+A QG + L  FGA      L+++  LRE+G ++
Sbjct: 44  IIQQLYAVGVLSLVIIVVSGLFVGMVLALQGYYTLVDFGAAESVGVLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+GS++ AE+G MK  E++ ++  M +D    +I+PR  A ++++PLL  + +
Sbjct: 104 TALLFAGRAGSSLTAEVGLMKATEQLSSMEMMAVDPELRVIAPRFLACVVAVPLLAGIFS 163

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G  +V      +    ++    S  + + ++  G+IK+      +G +A+ +G+ 
Sbjct: 164 LVGIYGGYLVSVGLIGLDGGAYWGNMQSAVSFSDDVLNGVIKSVVFGIVVGWIALYKGYE 223

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               S  + +  T  VV +   V+ +D L     F
Sbjct: 224 AVPTSEGVSRATTHGVVHASLAVLGLDFLLTALMF 258


>gi|261855373|ref|YP_003262656.1| hypothetical protein Hneap_0760 [Halothiobacillus neapolitanus c2]
 gi|261835842|gb|ACX95609.1| protein of unknown function DUF140 [Halothiobacillus neapolitanus
           c2]
          Length = 266

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 116/217 (53%), Gaps = 3/217 (1%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           +++++Y +GV  + ++++     G V+  QG   LS+F A   S+ +M  L L RE+G +
Sbjct: 50  IVQELYAIGVLSLVIILISGGFVGLVLGLQGYNILSKFNAT-ESLGVMVALSLVRELGPV 108

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGR+GSA+ AEI  MK  E++ A+  M +D +R +++PR W  + S+PLL  L 
Sbjct: 109 VTALLFAGRAGSAVTAEIALMKTTEQLSAMEMMAVDPLRRVVAPRFWGAVFSMPLLAGLF 168

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHST-ATLANIFTGLIKAPFMACAIGIVAMKEGF 333
           +   I G   +      +  A ++ +       + ++  G+IK+      +G++A+ EGF
Sbjct: 169 SLVGIAGGYFIGVVVLGVDPASYWGQIQQQMQPVDDVLNGVIKSLVFGAVVGLIAVFEGF 228

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                S  + +  T  VV S   V+ +D +   + F 
Sbjct: 229 NAEPTSLGISRATTRTVVLSSLCVLGLDFILTAWMFG 265


>gi|325519291|gb|EGC98730.1| hypothetical protein B1M_40153 [Burkholderia sp. TJI49]
          Length = 255

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 118/214 (55%), Gaps = 1/214 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q++++G     ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA
Sbjct: 42  KQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 101

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+++ AEIG MK  E++ A+  M +D ++ +I+PR+WA II++PLL  + N  
Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPIKNVIAPRMWAGIIAMPLLAAIFNAV 161

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            ++G   V      +    F+S+      + A++  G++K+     A+  +A+ +G+   
Sbjct: 162 GVLGGYFVGVVLIGVDPGAFWSQMQGGVEVWADVGNGVLKSIVFGFAVTFIALFQGYEAK 221

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                + +  T  VV +   V+ +D L     F+
Sbjct: 222 PTPEGVSRATTKTVVFASLAVLGLDFLLTALMFS 255


>gi|330815311|ref|YP_004359016.1| ABC transporter, inner membrane subunit [Burkholderia gladioli
           BSR3]
 gi|327367704|gb|AEA59060.1| ABC transporter, inner membrane subunit [Burkholderia gladioli
           BSR3]
          Length = 255

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 118/215 (54%), Gaps = 3/215 (1%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLT 216
           +Q++++G     ++ +     G V+  QG + L+++GAE  S+ L+  L L RE+G ++T
Sbjct: 42  KQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGAEQ-SLGLLVALSLVRELGPVVT 100

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+G+++ AEIG MK  E++ A+  M +D ++ +++PR+WA II++PLL+ +   
Sbjct: 101 ALLFAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPIKTVVAPRMWAGIITMPLLSAIFCA 160

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             ++G   V      +    F+S+      + +++  G++K+     A+   A+ +G+  
Sbjct: 161 VGVLGGYFVGVVLIGVDPGAFWSQMQGGVDVWSDVGNGVLKSVVFGFAVTFTALYQGYEA 220

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                 + +  T  VV +   V+ +D L     F+
Sbjct: 221 KPTPEGVSRATTKTVVYASLAVLGLDFLLTALMFS 255


>gi|295677863|ref|YP_003606387.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1002]
 gi|295437706|gb|ADG16876.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1002]
          Length = 255

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 121/214 (56%), Gaps = 1/214 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q+++VG   + ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA
Sbjct: 42  KQIHFVGNYSLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 101

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+++ AEIG MK  E++ A+  M +D V+++I+PR+WA IIS+P+L  + +  
Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVDPVKVVIAPRLWAGIISMPILAAIFSAV 161

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            ++G  +V      +    F+S+  S   +  ++  G++K+     A+  VA+ +G+   
Sbjct: 162 GVLGGYVVGVLLIGVDAGAFWSQMQSGVDVWRDVGAGVVKSVVFGLAVTFVALFQGYEAK 221

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                + +  T  VV +   V+ +D L     F+
Sbjct: 222 PTPEGVSRATTRTVVYASLAVLGLDFLLTALMFS 255


>gi|119897098|ref|YP_932311.1| hypothetical protein azo0807 [Azoarcus sp. BH72]
 gi|119669511|emb|CAL93424.1| conserved hypothetical membrane protein [Azoarcus sp. BH72]
          Length = 263

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 116/214 (54%), Gaps = 1/214 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +R++Y+ GV  + ++++     G V+  QG   L +FG+      L+++   RE+G ++ 
Sbjct: 47  LREIYFAGVLSLLIILVSGLFVGLVLGLQGYETLQRFGSSDALGVLVALSLTRELGPVVA 106

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ A R+GSA+ AEIG MK  E++ A+  M ++ +  +++PR W  +IS+PLL  + + 
Sbjct: 107 ALLFASRAGSAVTAEIGLMKATEQLKAMDMMAVNPLARVVAPRFWGGVISMPLLAAMFSA 166

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAV 335
             + G  ++   +  +    F+S+  +   +  ++  G+IK+     A+ ++A+ EG+  
Sbjct: 167 MGVFGGWLIGVVFIGVDDGAFWSQMQAAVDVRYDVLNGVIKSFVFGVAVSLIAVFEGYDC 226

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              +  + + +T  VV S   ++ +D +   F F
Sbjct: 227 TPTAEGVSRAITRTVVSSALAILALDFVLTSFMF 260


>gi|302877779|ref|YP_003846343.1| hypothetical protein Galf_0536 [Gallionella capsiferriformans ES-2]
 gi|302580568|gb|ADL54579.1| protein of unknown function DUF140 [Gallionella capsiferriformans
           ES-2]
          Length = 262

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 113/208 (54%), Gaps = 3/208 (1%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           +I++++  GV  + ++I+     G V+  QG   L ++G+E  ++ +M  L L RE+G +
Sbjct: 45  VIKELFSTGVMSLIIIIVAGLFVGMVLGLQGYETLKRYGSE-SALGVMVALGLVRELGPV 103

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           + A++ A R+GSA+ AEIG MK  E+I A+  M ++ +  +++PR WA +IS+PLL  L 
Sbjct: 104 MAALLFASRAGSAMTAEIGLMKATEQISAMEMMAVNPIARIVAPRFWAGVISMPLLAALF 163

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGF 333
           +   I G  +V      +    F+S+  +      +I  G+IK+      + ++A+ EGF
Sbjct: 164 SAVGIFGGYLVGVVQIGVDEGSFWSQMQAAVDFREDIMNGIIKSVVFGTVVTVIALFEGF 223

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIID 361
                +  +    T  VV S   ++++D
Sbjct: 224 DAPPTAEGVSGATTRTVVTSSLAILMLD 251


>gi|225164012|ref|ZP_03726299.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Opitutaceae bacterium
           TAV2]
 gi|224801394|gb|EEG19703.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Opitutaceae bacterium
           TAV2]
          Length = 258

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 93/159 (58%), Gaps = 4/159 (2%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG +   TG+   S+   +     + R +Y  G+  VPV++++   TG V+  QG   L+
Sbjct: 16  LGDLAQFTGKAFTSAIGSRKLSRRIFRAIYEQGIRCVPVILIVGLFTGLVLGLQGYHVLN 75

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           +FGA      L+S+  +RE+G +LTA+M+ G++GSA+ AE+G  + +E+IDA+ TMG D 
Sbjct: 76  RFGASGMLGTLVSLTLVRELGPVLTALMLVGQAGSALAAELGIQRNSEQIDALETMGADA 135

Query: 252 VRILISPRIWALIISLPLLT----ILANFSAIIGASIVI 286
              LISPR+ A +I  P+ T    ++  F   +  S+V+
Sbjct: 136 HAYLISPRLIAALIVYPIHTAFFCLIGMFGGYLSGSVVL 174


>gi|163854451|ref|YP_001628749.1| hypothetical protein Bpet0147 [Bordetella petrii DSM 12804]
 gi|163258179|emb|CAP40478.1| putative membrane protein [Bordetella petrii]
          Length = 259

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 117/214 (54%), Gaps = 1/214 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q++++G   + ++I+     G V+  QG + L+++G+E     L+++  +RE+G ++TA
Sbjct: 45  QQVHFIGNYSLLIIIVSGMFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTA 104

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+++ AEIG MK  E++ A+  M +D +R ++ PR+W  II++P+L  + +  
Sbjct: 105 LLFAGRAGTSLTAEIGLMKAGEQLAAMEVMAVDPMRRVLVPRLWGGIIAMPVLAAVFSMV 164

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            I+G  +V      +    F+S+  S   +  ++  G++K+      + +VA+ EG+   
Sbjct: 165 GILGGWVVGVLLIGVDAGAFWSQMQSGVDVWDDVANGVLKSLVFGVTVTLVALYEGWQAR 224

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                + +  T  VV     V+ +D L     F 
Sbjct: 225 PTPEGVARATTRTVVVGSLAVLGLDFLLTALMFG 258


>gi|119511793|ref|ZP_01630895.1| hypothetical protein N9414_16364 [Nodularia spumigena CCY9414]
 gi|119463566|gb|EAW44501.1| hypothetical protein N9414_16364 [Nodularia spumigena CCY9414]
          Length = 257

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 109/220 (49%)

Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209
           K +   +++ M   G + V  VIL+S   G +   Q A +L +FGA        ++   R
Sbjct: 33  KTYYRKILQHMVTAGPASVSPVILVSGFAGMIFTIQTARELVRFGALDAVGGAFALAFCR 92

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
           E+  LLTA +IAG+ GSA  AEIG+M++ E+IDA+  +  + +  L+ PR+ A I+ +P+
Sbjct: 93  ELAPLLTASIIAGQVGSAFAAEIGAMRVTEQIDALYMLKTNPIDYLVLPRVIACILMMPI 152

Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329
           + + A    I G      ++Y++    F     S   L+++F  L+K       + I   
Sbjct: 153 MMVFALIVGISGGVFAASQFYNVDPEAFLESVRSFLQLSDLFMVLVKGLIFGAIVAINGC 212

Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
             G      +  +G+  TT VV +  ++ ++D   ++  F
Sbjct: 213 SWGLTTKGGAKEVGESATTAVVTTWVLIFMMDFFLSLLMF 252


>gi|237749420|ref|ZP_04579900.1| ABC transport system permease [Oxalobacter formigenes OXCC13]
 gi|229380782|gb|EEO30873.1| ABC transport system permease [Oxalobacter formigenes OXCC13]
          Length = 258

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 116/213 (54%), Gaps = 3/213 (1%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTA 217
           Q++++G   + ++ +     G V+  QG + L ++G+E  ++ +M  L L RE+G ++TA
Sbjct: 46  QIFFIGNKSLLIICVSGLFVGFVLGLQGYYILIRYGSEQ-ALGVMVALSLTRELGPVVTA 104

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+++ AEIG MK  E++ A+  M ++ V  +++PR WA IIS+PLL  L + +
Sbjct: 105 LLYAGRAGTSLTAEIGLMKAGEQLAAMDMMAVNPVDRILAPRFWAGIISMPLLATLFSAA 164

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFAVG 336
            +IG  IV      +    F+S+      + N I  G+IK+     A+  +A+ +G+   
Sbjct: 165 GVIGGYIVGVVLIGVDDGAFWSQMQQGVDIWNDIGNGVIKSLVFGFAVTFMALFQGYEAR 224

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
                +    T  VV S  +V+ +D +     F
Sbjct: 225 PTPEGVSSATTRTVVYSSLLVLWLDFIMTALMF 257


>gi|91786696|ref|YP_547648.1| hypothetical protein Bpro_0794 [Polaromonas sp. JS666]
 gi|91695921|gb|ABE42750.1| protein of unknown function DUF140 [Polaromonas sp. JS666]
          Length = 264

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 119/219 (54%), Gaps = 2/219 (0%)

Query: 155 SLIR-QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
            L+R Q++++G   + ++ +     G V+  QG + L ++G+      L+++  +RE+G 
Sbjct: 46  GLVRDQIFFLGNYSLAIITVSGLFVGFVLGLQGYYTLQRYGSSEALGLLVALSLVRELGP 105

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           ++TA++ AGR+G+++ AEIG MK  E++ A+  M +D VR +++PR W  +I++PLL  +
Sbjct: 106 VVTALLFAGRAGTSLTAEIGLMKAGEQLSAMEMMAVDPVRRILAPRFWGGVIAMPLLAAV 165

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
            +   IIG  +V      +    F+S+  +   +  ++  G+IK+      +  VA+ +G
Sbjct: 166 FSAVGIIGGWVVGVVMIGVDAGSFWSQMQAGVDVWRDVGNGVIKSFVFGVTVTFVALHQG 225

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           F        + +  T  VV +   V+ +D L   + F++
Sbjct: 226 FEAQPTPEGVSRATTRTVVVASLAVLGLDFLLTAWMFSL 264


>gi|194290964|ref|YP_002006871.1| hypothetical protein RALTA_A2885 [Cupriavidus taiwanensis LMG
           19424]
 gi|193224799|emb|CAQ70810.1| conserved hypothetical protein, DUF140; Putative abc-type
           transporter, membrane component [Cupriavidus taiwanensis
           LMG 19424]
          Length = 259

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 119/213 (55%), Gaps = 1/213 (0%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           Q+++VG   + ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA+
Sbjct: 46  QVFFVGNLSLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTAL 105

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           + AGR+G+++ AEIG MK  E++ A+  M ++ ++ +++PR WA +I++P+L  + +   
Sbjct: 106 LFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVNPLQRVVAPRFWAGVIAMPVLAAIFSAVG 165

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           I+G  +V  +   +    F+S+      + A++  G+IK+     A+  +A+ +GF    
Sbjct: 166 ILGGYVVGVQLIGVDAGAFWSQMQGGVDVRADVLNGVIKSFIFGIAVTFIALYQGFEARP 225

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               + +  T  VV +   V+ +D L     F+
Sbjct: 226 TPEGVSRATTRTVVIASLAVLGLDFLLTALMFS 258


>gi|118581609|ref|YP_902859.1| hypothetical protein Ppro_3208 [Pelobacter propionicus DSM 2379]
 gi|118504319|gb|ABL00802.1| protein of unknown function DUF140 [Pelobacter propionicus DSM
           2379]
          Length = 256

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 119/228 (52%), Gaps = 8/228 (3%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G   A  ++   +    + Q   +G + + + +L    +G V+A Q   QL  F A  + 
Sbjct: 25  GGMLARIFRRPSYYREFVVQFDKLGFASLFICLLTGLFSGMVMALQALIQLKPFAATSYV 84

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
             +++   ++E+G +L ++M+AGR GSAI AE+G+M + E++DA+R  G D ++ L +PR
Sbjct: 85  GGMVAATMIKELGPVLASLMVAGRGGSAITAELGTMVVTEQVDAMRVEGTDIIQRLATPR 144

Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319
           + A+++++PLLT+  +  +++G  ++   Y   P  ++ S         ++  GL+K  F
Sbjct: 145 LKAMLLAMPLLTVATDVISLVGGYVMSAGYGINPI-MYVSGLSQFMVFQDLIEGLVKPLF 203

Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI---SIVIIIDSLF 364
                G++    G  VG+++    + V     Q++   S+ I++   F
Sbjct: 204 ----FGLIIAVTGCYVGLNTRGGAEGVGAAAKQAVVLSSVTILVSDFF 247


>gi|56476144|ref|YP_157733.1| organic solvent resistance ABC transporter permease [Aromatoleum
           aromaticum EbN1]
 gi|56312187|emb|CAI06832.1| predicted ABC-type transport system involved in resistance to
           organic solvents, permease component [Aromatoleum
           aromaticum EbN1]
          Length = 264

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 114/214 (53%), Gaps = 1/214 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           IR++Y+ GV  + ++++     G V+  QG   L +FG+      L+++   RE+G ++ 
Sbjct: 47  IREVYFSGVLSLLIIVVSGLFVGMVLGLQGYETLQRFGSGDALGVLVALSLTRELGPVVA 106

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ A R+GSA+ AEIG MK  E++ A+  M ++ +  +++PR W  +IS+PLL  L + 
Sbjct: 107 ALLFASRAGSAVTAEIGLMKATEQLKAMDMMAVNPIARVVAPRFWGGVISMPLLAALFSA 166

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAV 335
             + G  ++      +    F+S+  +      ++  G+IK+     A+ ++A+ EG+  
Sbjct: 167 MGVFGGWLIGVVLIGVDEGAFWSQMQAAVDFRFDVVNGVIKSVVFGAAVSLIAVFEGYDC 226

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              +  + + +T  VV S   ++ +D +   F F
Sbjct: 227 TPTAEGVSRAITRTVVSSALAILALDFVLTSFMF 260


>gi|220933918|ref|YP_002512817.1| protein of unknown function DUF140 [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995228|gb|ACL71830.1| protein of unknown function DUF140 [Thioalkalivibrio sp. HL-EbGR7]
          Length = 260

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 1/206 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I+++Y VGV  + ++ +     G V+  QG   L  FGAE     ++++  +RE+G ++T
Sbjct: 44  IKELYSVGVLSLLIIAVSGLFVGMVLGYQGYITLVNFGAEEALGSVVALSLVRELGPVIT 103

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+GSA+ AEIG MK  E++  +  M +D V+ +I PR  A  ISLPLL  + + 
Sbjct: 104 ALLFAGRAGSALSAEIGLMKTTEQLSGMEMMAVDPVKRVILPRFVAAFISLPLLAAIFSA 163

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAV 335
            A++G   +      +    ++S+  +      ++  G+IK+      +  +A+ EG+  
Sbjct: 164 VAVMGGYFIGVGLLGVDGGSYWSQMQANVDFYEDVMNGIIKSLVFGFVVAWIAVFEGYDT 223

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361
              S  + +  T  VV S   V+ +D
Sbjct: 224 VPTSEGVSRATTRTVVHSALAVLALD 249


>gi|16329621|ref|NP_440349.1| hypothetical protein slr1045 [Synechocystis sp. PCC 6803]
 gi|81670420|sp|P73009|Y1045_SYNY3 RecName: Full=Probable ABC transporter permease protein slr1045
 gi|1652104|dbj|BAA17029.1| slr1045 [Synechocystis sp. PCC 6803]
          Length = 263

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 106/208 (50%), Gaps = 1/208 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + QM  VG   + + ++ +   G V   Q A +   +GA      ++S+   RE+  +LT
Sbjct: 42  LEQMNMVGPESMAIALITAGFVGMVFTIQVAREFIYYGATTTIGGVLSLSLTRELAPVLT 101

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV+IAGR GSA  AEIG+M++ E++DA+  +  D +  L+ PR+ A  + LP+LT L+ F
Sbjct: 102 AVVIAGRVGSAFAAEIGTMRVTEQLDALYMLRTDPIDYLVVPRVIACGLMLPILTGLSLF 161

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
             + G  ++    Y I   +F +   +   L ++F  L K+      I I+    G    
Sbjct: 162 VGMAGGLVISSSLYAINPTIFLNSVQNFTQLWDVFACLFKSLVFGVIIAIIGCSWGLTTT 221

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             +  +G+  TT VV S+ + I I + F
Sbjct: 222 GGAKGVGESTTTAVVTSL-LAIFISNFF 248


>gi|307150966|ref|YP_003886350.1| hypothetical protein Cyan7822_1067 [Cyanothece sp. PCC 7822]
 gi|306981194|gb|ADN13075.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7822]
          Length = 266

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 107/213 (50%), Gaps = 1/213 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + QM  VG + + + ++ + V G +   Q A +    GA      ++++   RE+  ++ 
Sbjct: 43  LEQMMAVGPASLAIALITATVIGMIFTIQVAREFLALGAGSAVGGILALALSRELCPIMM 102

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV++AGR GSA  AEIG+M++ E+IDA+  +  D V  L+ PR+ A  I +P LT+LA  
Sbjct: 103 AVVVAGRVGSAFAAEIGTMRVTEQIDALYMLNADPVEYLVIPRVVACCIMVPALTVLALI 162

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           + + G  ++I ++Y I   VF     +   + ++  G IK     C I I+    G    
Sbjct: 163 TGLAGGLLMI-RFYGIADTVFLESIQNFVRVWDVICGPIKGIVFGCLIAIIGCNWGLTTT 221

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
             +  +G+  T  VV  +  + I + + +   F
Sbjct: 222 GGAKGVGESTTAAVVTCLLAIFIANFILSWIMF 254


>gi|299065474|emb|CBJ36643.1| conserved membrane protein of unknown function, DUF140 [Ralstonia
           solanacearum CMR15]
          Length = 255

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 115/216 (53%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+ Q+ ++G     ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++
Sbjct: 40  LVEQLRFIGNDSFIIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVV 99

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+G+++ AEIG MK NEE+ A+  M +D +  +++PR W   I++PLL  + +
Sbjct: 100 TALLFAGRAGTSLTAEIGLMKANEELIAMEMMAVDPLARVLAPRFWGGFIAMPLLAAIFS 159

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTA-TLANIFTGLIKAPFMACAIGIVAMKEGFA 334
              I+G   V      +    F+S+  +    + ++  G+IK+     A+  VA+ +G+ 
Sbjct: 160 AVGIVGGYFVGVGLIGVDAGAFWSQMQAGVDVVKDVLNGVIKSVVFGVAVTFVALYQGYE 219

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                  + +  T  VV +   V+ +D +     F+
Sbjct: 220 AKATPEGVSRATTRTVVIASLAVLALDFVLTALMFS 255


>gi|311103421|ref|YP_003976274.1| toluene tolerance protein Ttg2B [Achromobacter xylosoxidans A8]
 gi|310758110|gb|ADP13559.1| toluene tolerance protein Ttg2B [Achromobacter xylosoxidans A8]
          Length = 262

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 116/214 (54%), Gaps = 1/214 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q++++G   + ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA
Sbjct: 48  QQVHFIGNYSLLIIAVSGMFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTA 107

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+++ AEIG MK  E++ A+  M +D +R ++ PR+W  II++P+L  + +  
Sbjct: 108 LLFAGRAGTSLTAEIGLMKAGEQLAAMEVMAVDPIRRVLVPRLWGGIIAMPILAAVFSMV 167

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            I+G  +V      +    F+S+  +   +  ++  G+IK+      + +VA+ EG+   
Sbjct: 168 GILGGWVVGVLLIGVDAGAFWSQMQNGVDVWKDVANGVIKSLVFGVTVTLVALYEGWQAK 227

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                + +  T  VV     V+ +D L     F 
Sbjct: 228 PTPEGVARATTRTVVVGSLAVLGLDFLLTALMFG 261


>gi|262377332|ref|ZP_06070556.1| toluene tolerance protein Ttg2B [Acinetobacter lwoffii SH145]
 gi|262307785|gb|EEY88924.1| toluene tolerance protein Ttg2B [Acinetobacter lwoffii SH145]
          Length = 259

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 109/199 (54%), Gaps = 2/199 (1%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I QMY VGV  + ++++     GAV+  Q    LS FG+E      +++  LRE+  ++ 
Sbjct: 42  IYQMYRVGVLSLLIIVVSGLFIGAVLGLQMFSILSTFGSESMLGTAVALTLLRELAPVVA 101

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+GSA+ AEIG MK  E++ ++  +G+D ++ +ISPR+WA I SLP+L+++   
Sbjct: 102 ALLFAGRAGSALTAEIGLMKATEQLSSMEMIGVDPLKRVISPRLWAGIFSLPMLSVIFAA 161

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTG-LIKAPFMACAIGIVAMKEGFA 334
             I+G  +V   +       ++S   S+     ++  G +IK+   A     +A+ +G+A
Sbjct: 162 VGIMGGKMVGVDFLGADEGAYWSGMESSVQFYKDVLNGTIIKSFVFALICTWIAVYQGYA 221

Query: 335 VGVHSNSLGKKVTTCVVQS 353
               S  +    T  VV S
Sbjct: 222 CVPTSEGIATSTTRTVVYS 240


>gi|167587707|ref|ZP_02380095.1| hypothetical protein BuboB_20349 [Burkholderia ubonensis Bu]
          Length = 255

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 117/214 (54%), Gaps = 1/214 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q++++G     ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA
Sbjct: 42  KQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 101

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+++ AEIG MK  E++ A+  M +D ++ +I+PR+W  II++PLL  + N  
Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPIKTVIAPRMWGGIITMPLLAAIFNAV 161

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            ++G   V      +    F+S+      + A++  G++K+     A+  +A+ +G+   
Sbjct: 162 GVLGGYFVGVILIGVDSGAFWSQMQGGVQVWADVGNGVLKSIVFGFAVTFIALFQGYEAK 221

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                + +  T  VV +   V+ +D L     F+
Sbjct: 222 PTPEGVSRATTKTVVFASLAVLGLDFLLTALMFS 255


>gi|254294304|ref|YP_003060327.1| hypothetical protein Hbal_1946 [Hirschia baltica ATCC 49814]
 gi|254042835|gb|ACT59630.1| protein of unknown function DUF140 [Hirschia baltica ATCC 49814]
          Length = 264

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 96/181 (53%)

Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211
           +L  ++RQ   +G   +PVV L +   GA +A       S+F AE F  +++ +   RE+
Sbjct: 43  YLREVVRQCIQIGFFSLPVVGLTAVFIGAALALNIYMGGSRFNAEQFVPNIVVLGITREL 102

Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271
           G     +M+AGR G+ I AEIG+M++ E+IDA+ T+     R L +PR+ A  I+LP L 
Sbjct: 103 GPAFAGLMLAGRVGAGIAAEIGAMRVTEQIDALHTLSAKPERYLFAPRVIAATITLPALV 162

Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
           ++A+   ++G  +V     D    ++        T+ ++ +GLIKA      I I+   +
Sbjct: 163 LIADIIGVMGGWLVSVGALDFNSTIYLRNTLDFMTINDVLSGLIKAGVFGAIIAIMGCYQ 222

Query: 332 G 332
           G
Sbjct: 223 G 223


>gi|298490672|ref|YP_003720849.1| hypothetical protein Aazo_1524 ['Nostoc azollae' 0708]
 gi|298232590|gb|ADI63726.1| protein of unknown function DUF140 ['Nostoc azollae' 0708]
          Length = 261

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 102/206 (49%)

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G + +P V+L+S   G +   Q A +L +FGA        ++   RE+  +LTA +IAG+
Sbjct: 51  GPASLPPVLLVSGFAGMIFTIQTARELVRFGAVENVGGAFALAFCRELAPILTASIIAGQ 110

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
            GSA  AEIG+M++ E+IDA+  +  D +  L+ PR+ A  + +PL+ ILA    I G +
Sbjct: 111 VGSAFAAEIGAMRVTEQIDALYMLKTDPIDYLVLPRVIACCLMMPLMMILAVIMGITGGA 170

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
                +Y +    F        T +++F  L+K       + +     G      +  +G
Sbjct: 171 FAASYFYQVQPETFLESVRDFLTPSDVFIILLKGLIFGLIVAVNGCSWGLTTKGGAKEVG 230

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYF 369
           +  TT VV +   + I+D + A+  F
Sbjct: 231 ESATTAVVTTWVAIFIMDFILALILF 256


>gi|17547680|ref|NP_521082.1| hypothetical protein RSc2961 [Ralstonia solanacearum GMI1000]
 gi|17429984|emb|CAD16668.1| putative abc-type transport system involved in resistance to
           organic solvents, permease component abc transporter
           protein [Ralstonia solanacearum GMI1000]
          Length = 255

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 115/216 (53%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+ Q+ ++G     ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++
Sbjct: 40  LVEQLRFIGNDSFIIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVV 99

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+G+++ AEIG MK NEE+ A+  M +D +  +++PR W   I++PLL  + +
Sbjct: 100 TALLFAGRAGTSLTAEIGLMKANEELIAMEMMAVDPLARVLAPRFWGGFIAMPLLAAIFS 159

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTA-TLANIFTGLIKAPFMACAIGIVAMKEGFA 334
              I+G   V      +    F+S+  +    + ++  G+IK+     A+  VA+ +G+ 
Sbjct: 160 AVGILGGYFVGVGLIGVDAGAFWSQMQAGVDVVKDVLNGVIKSVVFGVAVTFVALYQGYE 219

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                  + +  T  VV +   V+ +D +     F+
Sbjct: 220 AKATPEGVSRATTRTVVIASLAVLALDFVLTALMFS 255


>gi|237747263|ref|ZP_04577743.1| ABC transport system permease [Oxalobacter formigenes HOxBLS]
 gi|229378614|gb|EEO28705.1| ABC transport system permease [Oxalobacter formigenes HOxBLS]
          Length = 258

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 115/212 (54%), Gaps = 1/212 (0%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           Q++++G   + ++ +     G V+  QG + L ++G+E     L+++   RE+G ++TA+
Sbjct: 46  QIFFIGNKSLIIICVSGLFVGFVLGLQGYYILVRYGSEQALGVLVTLALTRELGPVVTAL 105

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           + AGR+G+++ AEIG MK  E++ A+  M ++ V+ +++PR WA I+S+P+L  L + + 
Sbjct: 106 LYAGRAGTSLTAEIGLMKAGEQLAAMDMMAVNPVKRILAPRFWAGIVSMPILATLFSAAG 165

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           +IG  IV      +    F+S+      + N I  G+IK+     A+  +A+ +G+    
Sbjct: 166 VIGGYIVGVILIGVDDGAFWSQMQEGVDIWNDIGNGVIKSLVFGFAVTFMALFQGYESRP 225

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               +    T  VV S  +V+ +D +     F
Sbjct: 226 TPEGVSSATTRTVVYSSLLVLWLDFIMTALMF 257


>gi|158520050|ref|YP_001527920.1| hypothetical protein Dole_0033 [Desulfococcus oleovorans Hxd3]
 gi|158508876|gb|ABW65843.1| protein of unknown function DUF140 [Desulfococcus oleovorans Hxd3]
          Length = 258

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 129/259 (49%), Gaps = 9/259 (3%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFL-LSLIRQMYYVGVSGVPVV 171
           +IG+K + +++   + A      I       AS  K +  +   ++ Q+Y+  V  + ++
Sbjct: 7   YIGRKTLAYVDHLQNMA---AFAIDLCAVLLASPLKGRAVVRWGVVEQIYFTAVQALFLI 63

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
           I +S +TG+++      Q ++F  ++    LM IL +REIG ++TA+++  RS +A+  E
Sbjct: 64  IPLSLLTGSMML----IQFAKFSGQVDLGKLMIILVIREIGPVVTAMLVVLRSATAVTIE 119

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           IG M +  EID++   G+D +R+L  PR   +  ++  L I+ +  AI+G   V+     
Sbjct: 120 IGYMNVFNEIDSLEMTGIDPLRLLAIPRFVGITSAIVCLFIVFDLVAILGGYGVVRLTTS 179

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
           IP   F S   S  T A+I  GL+KA      I +V +  GF        + K  +T  +
Sbjct: 180 IPVGNFLSDIGSAITGADIIVGLVKALCFGVVISVVTLYHGFEAQKRITVIPKITSTAAI 239

Query: 352 QSISIVIIIDSLFA-IFYF 369
           +     I+ +   + +FYF
Sbjct: 240 ECFFYCIVTNIFISGLFYF 258


>gi|83748206|ref|ZP_00945233.1| toluene tolerance protein TTG2B [Ralstonia solanacearum UW551]
 gi|207721840|ref|YP_002252278.1| abc-type transport system involved in resistance to organic
           solvents, permease component protein [Ralstonia
           solanacearum MolK2]
 gi|207744518|ref|YP_002260910.1| abc-type transport system involved in resistance to organic
           solvents, permease component protein [Ralstonia
           solanacearum IPO1609]
 gi|300702838|ref|YP_003744439.1| hypothetical protein RCFBP_10489 [Ralstonia solanacearum CFBP2957]
 gi|83725174|gb|EAP72325.1| toluene tolerance protein TTG2B [Ralstonia solanacearum UW551]
 gi|206587007|emb|CAQ17591.1| abc-type transport system involved in resistance to organic
           solvents, permease component protein [Ralstonia
           solanacearum MolK2]
 gi|206595924|emb|CAQ62851.1| abc-type transport system involved in resistance to organic
           solvents, permease component protein [Ralstonia
           solanacearum IPO1609]
 gi|299070500|emb|CBJ41795.1| conserved membrane protein of unknown function, DUF140 [Ralstonia
           solanacearum CFBP2957]
          Length = 255

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 115/216 (53%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI Q+ ++G     ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++
Sbjct: 40  LIEQLRFIGNDSFIIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVV 99

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+G+++ AEIG MK NEE+ A+  M +D +  +++PR W   I++PLL  + +
Sbjct: 100 TALLFAGRAGTSLTAEIGLMKANEELIAMEMMAVDPLARVLAPRFWGGFIAMPLLAAIFS 159

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I+G   V      +    F+S+  +   +  ++  G+IK+     A+  VA+ +G+ 
Sbjct: 160 AVGIVGGYFVGVGLIGVDPGAFWSQMQAGVDVVDDVINGVIKSVVFGVAVTFVALYQGYE 219

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                  + +  T  VV +   V+ +D +     F+
Sbjct: 220 AKATPEGVSRATTRTVVIASLAVLALDFVLTALMFS 255


>gi|91785391|ref|YP_560597.1| ABC transporter inner membrane protein [Burkholderia xenovorans
           LB400]
 gi|91689345|gb|ABE32545.1| Putatitive ABC transporter, inner membrane subunit, toluene
           tolerance Ttg2B-like protein [Burkholderia xenovorans
           LB400]
          Length = 255

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 119/214 (55%), Gaps = 1/214 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q+++VG   + ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA
Sbjct: 42  KQIHFVGNYSLVIIAVSGLFVGFVLGLQGYYTLTRYGSEEALGLLVALSLVRELGPVVTA 101

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+++ AEIG MK  E++ A+  M +D V+I+I+PR+WA IIS+P+L  + +  
Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVDPVKIVIAPRLWAGIISMPILAAIFSAV 161

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            + G  +V      +    F+S+      +  ++  G++K+     A+  VA+ +G+   
Sbjct: 162 GVFGGYVVGVLLIGVDAGAFWSQMQGGVDVWHDVGAGVVKSVVFGLAVTFVALFQGYEAK 221

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                + +  T  VV +   V+ +D L     F+
Sbjct: 222 PTPEGVSRATTKTVVYASLAVLGLDFLLTALMFS 255


>gi|144899037|emb|CAM75901.1| ABC transporter permease protein [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 257

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 113/214 (52%), Gaps = 2/214 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +R M  +G   +PVV L +  TG V+A Q     S+F AE     ++ +   RE+  +L 
Sbjct: 43  LRAMVEIGYYSLPVVGLTAVFTGMVLALQSYSGFSRFAAESAVATVVVLSVTRELAPVLA 102

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
            +M+AGR G+++ AEIG+M++ E+IDA+ T+  +  + L++PR+ A ++ +P L ++A+ 
Sbjct: 103 GLMVAGRIGASMAAEIGTMRVTEQIDALTTLSTNPFKYLVAPRLLAGLLMVPCLVLVADI 162

Query: 277 SAIIGASIV-IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             + G  IV ++K    P + + +R        ++ +GL KA      I ++    G+  
Sbjct: 163 IGVFGGYIVGVYKLGFNP-STYLARTWEFLEPLDVISGLTKAAVFGFIISLMGCYHGYYS 221

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              +  +G   T  VV +  +++I + +    YF
Sbjct: 222 RGGAQGVGAATTNSVVSAAIMILIFNYVITALYF 255


>gi|42520801|ref|NP_966716.1| hypothetical protein WD0989 [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|42410541|gb|AAS14650.1| membrane protein, putative [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 260

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 1/203 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           RQ+  +G   +P+V L     GA I  Q +        E     L++I  ++E+G +L +
Sbjct: 49  RQIIEIGFFSLPIVGLTGVFIGAAIVLQSSLSDPSINQEQIIPKLVTITIIKELGPVLIS 108

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +++ G+ GS++ AEIG+M+I E+IDA+ T+ ++  + LI+PRI A II  P+LT+ A+  
Sbjct: 109 LIMVGKVGSSVAAEIGTMRITEQIDALTTLNINPFKYLIAPRILASIIVFPILTVCADLI 168

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            I G  I     ++    ++           +  TGLIKA      I + +   G+    
Sbjct: 169 GIFGGCITAVFEFNHNLNIYIKHTAQFFNTYDFITGLIKATAFGAIISVSSCYYGYHCKE 228

Query: 338 HSNSLGKKVTTCVVQSISIVIII 360
            +  +G   T+ VV S SI+II+
Sbjct: 229 GARGVGVATTSTVVLS-SILIIL 250


>gi|217969318|ref|YP_002354552.1| hypothetical protein Tmz1t_0889 [Thauera sp. MZ1T]
 gi|217506645|gb|ACK53656.1| protein of unknown function DUF140 [Thauera sp. MZ1T]
          Length = 262

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 114/214 (53%), Gaps = 1/214 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           IR++Y+ GV  + ++++     G V+  QG   L ++G+      ++++  LRE+G ++ 
Sbjct: 47  IRELYFSGVLSLLIIMVSGLFVGLVLGLQGYDILQRYGSADAVGVMVALSLLRELGPVIA 106

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ A R+GSAI AEIG MK  E++ A+  M ++ +  +++PR W  ++S+PLL  L + 
Sbjct: 107 ALLFASRAGSAITAEIGLMKTTEQLKAMDMMAVNPIARVVAPRFWGGVLSMPLLAALFSA 166

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAV 335
             + G  ++      +    F+S+  +      ++  G+IK+      + ++A+ EG+  
Sbjct: 167 MGVFGGWLITVVVIGVDDGAFWSQMQAAVEFRYDVVNGVIKSAVFGTVVSLIAVFEGYDC 226

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              +  + + +T  VV S   ++ +D +   F F
Sbjct: 227 QPTAEGVSRAITRTVVTSALAILALDFVLTSFMF 260


>gi|319778667|ref|YP_004129580.1| Uncharacterized ABC transporter, permease component YrbE
           [Taylorella equigenitalis MCE9]
 gi|317108691|gb|ADU91437.1| Uncharacterized ABC transporter, permease component YrbE
           [Taylorella equigenitalis MCE9]
          Length = 258

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 117/218 (53%), Gaps = 7/218 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           +I Q++++G   + ++ +     G V+  QG   LS +G+E  S+ L+  L L RE+G +
Sbjct: 43  VIEQLHFIGNHSLIIIAVSGLFVGFVLGLQGYHTLSMYGSE-ESLGLVVSLALTRELGPV 101

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGR+G+A  AEIG MK  E++ A+  MG++ +R ++ PR W   I++P+L  + 
Sbjct: 102 VTALLFAGRAGTATTAEIGLMKSGEQLAAMDVMGINPIRRILVPRFWGGTIAMPILATI- 160

Query: 275 NFSAIIGASIVIWKYY--DIPFAVFFSRFHS-TATLANIFTGLIKAPFMACAIGIVAMKE 331
            FSAI      +      D+    F+S+  S T  + +I  G IK+     A+ ++A+ E
Sbjct: 161 -FSAIGVVGGWVVGVVLIDVDSGSFWSQMQSGTDIVEDILNGFIKSVVFGVAVMLIALFE 219

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           G+        + K  T  VV+S   V+ +D L     F
Sbjct: 220 GWYSVPTPEGVAKATTHTVVKSSLCVLGLDFLLTAVMF 257


>gi|88607911|ref|YP_504642.1| putative ABC transporter, permease protein [Anaplasma
           phagocytophilum HZ]
 gi|88598974|gb|ABD44444.1| putative ABC transporter, permease protein [Anaplasma
           phagocytophilum HZ]
          Length = 244

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 109/211 (51%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q + V    +P+V + S  TG  +A Q     S   +  F   ++++  +RE+G +L  
Sbjct: 33  KQFFEVWFFSLPIVAVTSLFTGGALALQDTLVGSAKVSGNFMAGIVTVAIVRELGPVLLG 92

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +++AGR G+A+ AEIG+M+I E+IDA+ T+  D    LI+PR+ AL++++P+L I A+  
Sbjct: 93  LIVAGRIGAAVAAEIGTMRITEQIDALTTLDTDPFHYLIAPRVIALVLAMPVLMIYADIL 152

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            + G  +V           +         L ++  GL+KA      I +V    G+   +
Sbjct: 153 GVFGGFVVGTLGLGYGQEEYLGGVMEFLLLQDVIEGLVKAVSFGLVISLVGCYNGYHCEI 212

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
            +  +G   T   V +  ++I+++ +  +FY
Sbjct: 213 GARGVGTATTKTSVAASMLIILLNYIITVFY 243


>gi|225619573|ref|YP_002720830.1| ABC transporter permease [Brachyspira hyodysenteriae WA1]
 gi|225214392|gb|ACN83126.1| Ttg2B, ABC-type transport system, permease component [Brachyspira
           hyodysenteriae WA1]
          Length = 268

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 123/236 (52%), Gaps = 11/236 (4%)

Query: 136 ISNTGEFCAS-----SYKFK-GFLLSLIR-QMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
           ++  GEF         Y F+  F   L++ Q+  +GV    V  +    TG V++ Q A 
Sbjct: 22  LATLGEFATLMIEVFRYTFRPTFSFKLLKEQIIRMGVDSFVVAAVTVLCTGMVMSLQIAV 81

Query: 189 QLSQF--GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
            L     G   F   ++    ++E+  +L A++ AGR GS++ AEIG+M+++E++DA++T
Sbjct: 82  VLDSVLKGISQFVGSMVGKAMVKELSPMLLALIFAGRVGSSVTAEIGTMQVSEQLDALKT 141

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV-IWKYYDIPFAVFFSRFHSTA 305
           +  + +  +  PR WA +ISLP+LT+ A+   ++G ++V ++     P   +F R  +  
Sbjct: 142 LYTNPIEYVAVPRFWAAVISLPMLTVSADVIGVLGGAVVTVFVLRSDPMH-YFDRAIAVI 200

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           ++ +    LIK+      + +++   GF     +  +GK  TT VV S  I++I D
Sbjct: 201 SVGDFIGSLIKSTIFGAEVMLISCFYGFRTSGGAEGVGKATTTSVVYSFMIILITD 256


>gi|294339439|emb|CAZ87798.1| Toluene tolerance protein Ttg2B [Thiomonas sp. 3As]
          Length = 261

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 118/216 (54%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+QMY++G   + ++ +     G V+  QG + LS++G+      L+++  +RE+G ++
Sbjct: 45  LIQQMYFLGNLSLVIIAVSGLFVGFVLGLQGYYTLSRYGSSSALGVLVALSLVRELGPVV 104

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+G+++ AEIG MK  E+I A+  M +D V  +++PR WA +I +PLL  + +
Sbjct: 105 TALLFAGRAGTSLTAEIGLMKAGEQIAAMEMMAVDPVVRVLAPRFWAGVIVMPLLAAVFS 164

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334
              I+G  +V      +    F+S+  S   +  ++  G+IK+     A+  VA+ +G+ 
Sbjct: 165 AVGIMGGYVVGVVMIGVDAGQFWSQMQSGVDVFKDVGNGVIKSVVFGLAVTFVALLQGWR 224

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                  + +  T  VV +   V+ +D +     F+
Sbjct: 225 SQPTPEGVSRATTRTVVIASLAVLALDFVLTAMMFS 260


>gi|262196627|ref|YP_003267836.1| hypothetical protein Hoch_3441 [Haliangium ochraceum DSM 14365]
 gi|262079974|gb|ACY15943.1| protein of unknown function DUF140 [Haliangium ochraceum DSM 14365]
          Length = 258

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 92/162 (56%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +I QMY +GV  +P+V L +F  G ++A Q    + Q GA             RE+G ++
Sbjct: 45  VIDQMYKMGVQSLPIVALAAFFAGVLMALQSGVIVRQLGATSLLGWGGGFAIFRELGPVV 104

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A+M +GR G+   A++G+MKI E++D +R + +D VR L++PRI A++ +L  LTI+ N
Sbjct: 105 IALMFSGRVGANNAADLGNMKITEQLDGLRALAIDPVRYLVAPRIVAMVGALVSLTIIGN 164

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
             A+ G ++     +D+ F   F+      +  ++  G+IK+
Sbjct: 165 SIALQGGTVFSMLLFDVEFITLFTSLVDNISPFDLLHGVIKS 206


>gi|94312189|ref|YP_585399.1| hypothetical protein Rmet_3258 [Cupriavidus metallidurans CH34]
 gi|93356041|gb|ABF10130.1| toluene transporter subunit: membrane component of ABC superfamily
           [Cupriavidus metallidurans CH34]
          Length = 258

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 118/213 (55%), Gaps = 1/213 (0%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           Q+++VG   + ++ +     G V+  QG + L++FG+E     L+++  +RE+G ++ A+
Sbjct: 46  QVFFVGNLSLVIIAVSGLFVGFVLGLQGYYTLNRFGSEQALGLLVALSLVRELGPVVAAL 105

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           + AGR+G+++ AEIG MK  E++ A+  M ++ ++ +I+PR WA +I++P+L  + +   
Sbjct: 106 LFAGRAGTSLTAEIGLMKAGEQLSAMEMMAVNPLQRVIAPRFWAGVIAMPVLATIFSALG 165

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           ++G  +V  +   +    F+S+  +   + A++  G+IK+      +  +A+ +GF    
Sbjct: 166 VLGGYLVGVQLIGVDAGAFWSQMQNGVDVRADVLNGVIKSFIFGITVTFIALYQGFEAKP 225

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               + +  T  VV +   V+ +D L     F+
Sbjct: 226 TPEGVSRATTRTVVLASLAVLGLDFLLTALMFS 258


>gi|58697152|ref|ZP_00372577.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|58698663|ref|ZP_00373555.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58699132|ref|ZP_00373959.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|225630652|ref|YP_002727443.1| hypothetical protein WRi_009360 [Wolbachia sp. wRi]
 gi|58534353|gb|EAL58525.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58534816|gb|EAL58923.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58536541|gb|EAL59904.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|225592633|gb|ACN95652.1| hypothetical protein WRi_009360 [Wolbachia sp. wRi]
          Length = 260

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 1/203 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           RQ+  +G   +P+V L     GA I  Q +        E     L++I  ++E+G +L +
Sbjct: 49  RQIIEIGFFSLPIVGLTGVFIGAAIVLQSSLSDPLINQEQIIPKLVTITIIKELGPVLIS 108

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +++ G+ GS++ AEIG+M+I E+IDA+ T+ ++  + LI+PRI A II  P+LT+ A+  
Sbjct: 109 LIMVGKVGSSVAAEIGTMRITEQIDALTTLNINPFKYLIAPRILASIIVFPILTVCADLI 168

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            I G  I     ++    ++           +  TGLIKA      I + +   G+    
Sbjct: 169 GIFGGCITAVFEFNHNLNIYIKHTAQFFNTYDFITGLIKATVFGAIISVSSCYYGYHCKE 228

Query: 338 HSNSLGKKVTTCVVQSISIVIII 360
            +  +G   T+ VV S SI+II+
Sbjct: 229 GARGVGVATTSTVVLS-SILIIL 250


>gi|296135334|ref|YP_003642576.1| protein of unknown function DUF140 [Thiomonas intermedia K12]
 gi|295795456|gb|ADG30246.1| protein of unknown function DUF140 [Thiomonas intermedia K12]
          Length = 261

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 118/216 (54%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+QMY++G   + ++ +     G V+  QG + LS++G+      L+++  +RE+G ++
Sbjct: 45  LIQQMYFLGNLSLVIIAVSGLFVGFVLGLQGYYTLSRYGSSSALGVLVALSLVRELGPVV 104

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+G+++ AEIG MK  E+I A+  M +D V  +++PR WA +I +PLL  + +
Sbjct: 105 TALLFAGRAGTSLTAEIGLMKAGEQIAAMEMMAVDPVVRVLAPRFWAGVIVMPLLAAVFS 164

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334
              I+G  +V      +    F+S+  S   +  ++  G+IK+     A+  VA+ +G+ 
Sbjct: 165 AVGIMGGYVVGVVMIGVDAGQFWSQMQSGVDVFKDVGNGVIKSVVFGLAVTFVALLQGWR 224

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                  + +  T  VV +   V+ +D +     F+
Sbjct: 225 SQPTPEGVSRATTRTVVIASLAVLALDFVLTAMMFS 260


>gi|209516602|ref|ZP_03265456.1| protein of unknown function DUF140 [Burkholderia sp. H160]
 gi|209503043|gb|EEA03045.1| protein of unknown function DUF140 [Burkholderia sp. H160]
          Length = 255

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 120/214 (56%), Gaps = 1/214 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q+++VG   + ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA
Sbjct: 42  KQIHFVGNYSLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 101

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+++ AEIG MK  E++ A+  M +D V+++I+PR+WA I+S+P+L  + +  
Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVDPVKVVIAPRLWAGIVSMPILAAIFSAV 161

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            ++G  +V      +    F+S+      +  ++  G++K+     A+  VA+ +G+   
Sbjct: 162 GVLGGYVVGVLLIGVDAGAFWSQMQGGVDVWKDVGAGVVKSVVFGLAVTFVALFQGYEAK 221

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                + +  T  VV +   V+ +D L     F+
Sbjct: 222 PTPEGVSRATTRTVVYASLAVLGLDFLLTALMFS 255


>gi|115379773|ref|ZP_01466845.1| ABC-type transport system involved in resistance to organic
           solvents [Stigmatella aurantiaca DW4/3-1]
 gi|310821468|ref|YP_003953826.1| ABC transporter permease [Stigmatella aurantiaca DW4/3-1]
 gi|115363220|gb|EAU62383.1| ABC-type transport system involved in resistance to organic
           solvents [Stigmatella aurantiaca DW4/3-1]
 gi|309394540|gb|ADO71999.1| ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1]
          Length = 272

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 106/203 (52%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           Q+ +VGV  + +V L    TG V AQQ +   + F AE      +++   RE+  + +A+
Sbjct: 61  QLDFVGVGSIFIVALTGLFTGMVFAQQVSTAFALFDAESLVGPTVALTLSRELAPVFSAL 120

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           M+  R+GS++  E+G+M++ E++DA+ TM ++ V+ L+ PR+ + +I  P+LT+L   S 
Sbjct: 121 MVTMRAGSSMCTELGTMRVTEQVDALETMAVNPVQYLLVPRVLSGLIMGPVLTMLFFTSG 180

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           + GA ++     +     F SR        +++ G +K       I ++   +G+     
Sbjct: 181 MSGAYMISVFVQNTSAGTFISRTQQWMEPLDLYEGTLKGAVFGLTITLICCYKGYNASGG 240

Query: 339 SNSLGKKVTTCVVQSISIVIIID 361
           +  +G+  T  +V S   + I+D
Sbjct: 241 AKGVGQATTEAMVSSALAIFILD 263


>gi|120609708|ref|YP_969386.1| hypothetical protein Aave_1014 [Acidovorax citrulli AAC00-1]
 gi|326315802|ref|YP_004233474.1| hypothetical protein Acav_0985 [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|120588172|gb|ABM31612.1| protein of unknown function DUF140 [Acidovorax citrulli AAC00-1]
 gi|323372638|gb|ADX44907.1| protein of unknown function DUF140 [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 260

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 120/219 (54%), Gaps = 2/219 (0%)

Query: 155 SLIR-QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
            L+R Q++++G   + ++ +     G V+  QG + L ++G+      L+++  +RE+G 
Sbjct: 42  GLVRDQLHFLGNYSLSIISVSGLFVGFVLGLQGYYTLQRYGSAQALGLLVALSLVRELGP 101

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           +++A++ AGR+G+++ AEIG M+  E++ A+  M +D VR +++PR WA +I++PLL  +
Sbjct: 102 VVSALLFAGRAGTSLTAEIGLMRAGEQLSAMEMMAVDPVRRILAPRFWAGVIAMPLLAAV 161

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
            +   +IG  IV      +    F+ +  S   + A++  G++K+      +  +A+ +G
Sbjct: 162 FSAVGVIGGWIVGVVMLGVDGGAFWGQMQSGVDVWADVGNGVLKSFVFGVTVTFIALLQG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           +        + +  T  VV +   V+ +D L   + F+I
Sbjct: 222 YIAKPTPEGVSRATTRTVVMASLTVLGLDFLLTAWMFSI 260


>gi|87120456|ref|ZP_01076350.1| hypothetical protein MED121_21902 [Marinomonas sp. MED121]
 gi|86164099|gb|EAQ65370.1| hypothetical protein MED121_21902 [Marinomonas sp. MED121]
          Length = 260

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 118/204 (57%), Gaps = 2/204 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y VGV  + ++++     G V+  QG   L++FG+E     L+++  LRE+G ++
Sbjct: 43  LMKQIYSVGVLSLVIILVSGLFIGMVLGLQGYTILAKFGSEQAVGQLLALTLLRELGPVV 102

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+ SA+ AEIG MK  E++ ++  MG+D  R +I+PR  A +I LP+L ++ +
Sbjct: 103 TALLFAGRACSALTAEIGLMKATEQLSSLEMMGVDPYRRIIAPRFIAGLICLPILCVIFS 162

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I+G   V   +  I    F+S    +   + ++  G+IKA   A A   +A+ +G+ 
Sbjct: 163 AVGILGGEFVAVTWLQIHGGSFWSLMQQSVYFSTDVVNGIIKAFCFAIATTWIAVFQGYQ 222

Query: 335 VGVHSNSLGKKVT-TCVVQSISIV 357
               S  +GK  T T V+ S+SI+
Sbjct: 223 CEPTSEGIGKATTRTVVLGSLSIL 246


>gi|83591748|ref|YP_425500.1| hypothetical protein Rru_A0408 [Rhodospirillum rubrum ATCC 11170]
 gi|83574662|gb|ABC21213.1| Protein of unknown function DUF140 [Rhodospirillum rubrum ATCC
           11170]
          Length = 257

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 113/214 (52%), Gaps = 2/214 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           RQ+  +G   +PVV L +  TG V++ Q     ++F AE  +  ++ +   RE+G +L  
Sbjct: 44  RQLVEIGYYSLPVVGLTAIFTGMVLSLQSHSGFARFSAEGATATVVVLSMTRELGPVLAG 103

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +M+AGR G+A+ AEIG+MK+ E+IDA+ T+  +  + L+ PR+ A +  LP+L + A+  
Sbjct: 104 LMVAGRIGAAMAAEIGTMKVTEQIDALTTLATNPYKYLVVPRLIAGVTMLPILVLTADII 163

Query: 278 AIIGASIV-IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            + G  ++ ++K    P     S +     + ++ +GL+KA      I ++    G    
Sbjct: 164 GVFGGYLIGVYKLGFNPSNYIASTWEFLEPM-DVISGLVKASVFGFIIALMGCYHGSQSK 222

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             +  +G   T  VV +  ++++ + +    +FA
Sbjct: 223 GGAQGVGAATTNAVVSASILILVCNYMITELFFA 256


>gi|218441471|ref|YP_002379800.1| hypothetical protein PCC7424_4570 [Cyanothece sp. PCC 7424]
 gi|218174199|gb|ACK72932.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7424]
          Length = 266

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 100/198 (50%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + QM  VG   + + ++ + V G +   Q A +    GA      ++++   RE+  ++T
Sbjct: 42  LEQMMAVGPGSLVIALITAAVIGMIFTIQVAREFLALGAGSAVGGILALSLARELSPIMT 101

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV++AGR GSA  AEIG+M++ E+IDA+  +  D +  L+ PR+ A  + +PL+TI+A  
Sbjct: 102 AVIVAGRVGSAFAAEIGTMQVTEQIDALYMLKTDPIEYLVVPRLVACCVMVPLMTIIALV 161

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
             + G  ++    YDI   VF     +   +++I +G IK       I I+    G    
Sbjct: 162 IGLAGGLLIASSIYDISIEVFLDSIQTFLKISDILSGPIKGIVFGALIAIIGCNWGLTTT 221

Query: 337 VHSNSLGKKVTTCVVQSI 354
             +  +G+  T  VV  +
Sbjct: 222 GGAKGVGESTTAAVVTCL 239


>gi|220907786|ref|YP_002483097.1| hypothetical protein Cyan7425_2378 [Cyanothece sp. PCC 7425]
 gi|219864397|gb|ACL44736.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7425]
          Length = 255

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 106/213 (49%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           +L+ Q+  VG   +  V+LI+  TG +   Q   +LSQFGA+       ++   RE+  +
Sbjct: 41  NLLEQLAIVGWGSLLAVVLINTFTGVLFTIQTTRELSQFGAKSLVGGAFALGYCRELAPV 100

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           LTA ++ G   SA  AEIG M++ ++IDA+  +  D +  L+ PR+ +  + LP+LT+LA
Sbjct: 101 LTAGLLVGEVSSAFAAEIGEMRVTDQIDALYILHTDPIDYLVVPRVLSCCLMLPVLTVLA 160

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
              A++G ++   K Y IP  VF +   +   + ++   ++KA       G+V    G  
Sbjct: 161 IGGAMLGGTLAGAKIYGIPPTVFLNSIQAVLEVGDLCGIVLKAFIFGIITGLVGCGWGLT 220

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
               +  + K     VV    +V   + +  I+
Sbjct: 221 TTGGAKGVSKSTKAAVVNGWILVFFANFVLTIW 253


>gi|296159550|ref|ZP_06842374.1| protein of unknown function DUF140 [Burkholderia sp. Ch1-1]
 gi|295890258|gb|EFG70052.1| protein of unknown function DUF140 [Burkholderia sp. Ch1-1]
          Length = 255

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 119/214 (55%), Gaps = 1/214 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q+++VG   + ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA
Sbjct: 42  KQIHFVGNYSLVIIAVSGLFVGFVLGLQGYYTLTRYGSEEALGLLVALSLVRELGPVVTA 101

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+++ AEIG MK  E++ A+  M +D V+++I+PR+WA IIS+P+L  + +  
Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVDPVKVVIAPRLWAGIISMPILAAIFSAV 161

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            + G  +V      +    F+S+      +  ++  G++K+     A+  VA+ +G+   
Sbjct: 162 GVFGGYVVGVLLIGVDAGAFWSQMQGGVDVWHDVGAGVVKSVVFGLAVTFVALFQGYEAK 221

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                + +  T  VV +   V+ +D L     F+
Sbjct: 222 PTPEGVSRATTKTVVYASLAVLGLDFLLTALMFS 255


>gi|149194581|ref|ZP_01871677.1| abc transporter, permease protein [Caminibacter mediatlanticus
           TB-2]
 gi|149135325|gb|EDM23805.1| abc transporter, permease protein [Caminibacter mediatlanticus
           TB-2]
          Length = 259

 Score = 89.7 bits (221), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 101/207 (48%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
            L  Q+Y++G   + V+ L SF TG V A Q      +FG E F    + I  ++E+G +
Sbjct: 43  ELFNQIYFMGYGSLGVIFLTSFFTGLVEAVQLYNGFHKFGVEDFMGYTIFISIVKELGPV 102

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
             ++M+  R  SA  AE+GSMK+ E+IDA+  M ++  + LI PRI A IISLPLL +  
Sbjct: 103 FASLMVISRGISAYAAELGSMKVTEQIDALEVMAVNSKQYLIVPRILATIISLPLLILFF 162

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
           +  + IGA ++      +    +         + +I  G+IK       I  +    G+ 
Sbjct: 163 DAVSNIGAYLISTYSLGVNGFAYLDHIRQFGEIRDIIEGVIKGAVFGYIISAIGTYIGYN 222

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIID 361
               +  +G+  T  VV S   V + D
Sbjct: 223 TRGGAKGVGQSTTKAVVYSSVAVFVAD 249


>gi|307731184|ref|YP_003908408.1| hypothetical protein BC1003_3170 [Burkholderia sp. CCGE1003]
 gi|307585719|gb|ADN59117.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1003]
          Length = 259

 Score = 89.7 bits (221), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 120/214 (56%), Gaps = 1/214 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q+++VG   + ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA
Sbjct: 46  KQIHFVGNYSLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 105

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+++ AEIG MK  E++ A+  M +D V+++++PR+WA IIS+P+L  + +  
Sbjct: 106 LLFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVDPVKVVVAPRLWAGIISMPILAAIFSAV 165

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            ++G  +V      +    F+S+      +  ++  G++K+     A+  VA+ +G+   
Sbjct: 166 GVLGGYVVGVLLIGVDAGAFWSQMQGGVDVWRDVGAGVVKSVVFGLAVTFVALFQGYEAR 225

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                + +  T  VV +   V+ +D L     F+
Sbjct: 226 PTPEGVSRATTKTVVYASLAVLGLDFLLTALMFS 259


>gi|187479775|ref|YP_787800.1| membrane protein [Bordetella avium 197N]
 gi|115424362|emb|CAJ50915.1| putative membrane protein [Bordetella avium 197N]
          Length = 262

 Score = 89.7 bits (221), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 115/214 (53%), Gaps = 1/214 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q++++G   + ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA
Sbjct: 48  QQVHFIGNYSLLIIAVSGLFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTA 107

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+++ AEIG MK  E++ A+  M +D +R ++ PR W  +I++P+L  + +  
Sbjct: 108 LLFAGRAGTSLTAEIGLMKAGEQLAAMEVMAVDPMRRVLVPRFWGGVIAMPILASVFSMV 167

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            I+G  +V      +    F+S+  +   +  ++  G+IK+      + +VA+ EG+   
Sbjct: 168 GILGGWVVGVVMIGVDTGAFWSQMQAGVDIWDDVLNGVIKSVVFGITVTLVALYEGWQAR 227

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                + +  T  VV     V+ +D L     F 
Sbjct: 228 PTPEGVARATTRTVVVGSLAVLALDFLLTALMFG 261


>gi|187925542|ref|YP_001897184.1| hypothetical protein Bphyt_3570 [Burkholderia phytofirmans PsJN]
 gi|187716736|gb|ACD17960.1| protein of unknown function DUF140 [Burkholderia phytofirmans PsJN]
          Length = 255

 Score = 89.7 bits (221), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 119/214 (55%), Gaps = 1/214 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q+++VG   + ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA
Sbjct: 42  KQIHFVGNYSLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 101

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+++ AEIG MK  E++ A+  M +D V+++++PR+WA IIS+P+L  + +  
Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVDPVKVVVAPRLWAGIISMPILAAIFSAV 161

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            + G  +V      +    F+S+      +  ++  G+IK+     A+  VA+ +G+   
Sbjct: 162 GVFGGYVVGVLLIGVDAGAFWSQMQGGVDVWRDVGAGVIKSVVFGLAVTFVALFQGYEAK 221

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                + +  T  VV +   V+ +D L     F+
Sbjct: 222 PTPEGVSRATTKTVVYASLAVLGLDFLLTALMFS 255


>gi|323527530|ref|YP_004229683.1| hypothetical protein BC1001_3209 [Burkholderia sp. CCGE1001]
 gi|323384532|gb|ADX56623.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1001]
          Length = 259

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 119/214 (55%), Gaps = 1/214 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q+++VG   + ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA
Sbjct: 46  KQIHFVGNYSLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 105

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+++ AEIG MK  E++ A+  M +D V+++++PR+WA IIS+P+L  + +  
Sbjct: 106 LLFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVDPVKVVVAPRLWAGIISMPILAAIFSAV 165

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            + G  +V      +    F+S+      +  ++  G++K+     A+  VA+ +G+   
Sbjct: 166 GVAGGYVVGVLLIGVDAGAFWSQMQGGVDVWRDVGAGVVKSVVFGLAVTFVALFQGYEAR 225

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                + +  T  VV +   V+ +D L     F+
Sbjct: 226 PTPEGVSRATTKTVVYASLAVLGLDFLLTALMFS 259


>gi|300690218|ref|YP_003751213.1| hypothetical protein RPSI07_0537 [Ralstonia solanacearum PSI07]
 gi|299077278|emb|CBJ49904.1| conserved membrane protein of unknown function, DUF140 [Ralstonia
           solanacearum PSI07]
          Length = 255

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 115/216 (53%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +I Q+ ++G     ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++
Sbjct: 40  VIEQLRFIGNDSFIIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVV 99

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+G+++ AEIG MK NEE+ A+  M +D +  +++PR W   I++PLL  + +
Sbjct: 100 TALLFAGRAGTSLTAEIGLMKANEELIAMEMMAVDPLARVLAPRFWGGFIAMPLLAAIFS 159

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              ++G   V      +    F+S+  +   +  ++  G+IK+     A+  VA+ +G+ 
Sbjct: 160 AVGVLGGYFVGVGLIGVDAGAFWSQMQAGVDVVDDVLNGVIKSVVFGVAVTFVALYQGYE 219

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                  + +  T  VV +   V+ +D +     F+
Sbjct: 220 AKATPEGVARATTRTVVIASLAVLALDFVLTALMFS 255


>gi|152980680|ref|YP_001354988.1| ABC transport system permease protein [Janthinobacterium sp.
           Marseille]
 gi|151280757|gb|ABR89167.1| ABC transport system permease protein [Janthinobacterium sp.
           Marseille]
          Length = 258

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 122/215 (56%), Gaps = 5/215 (2%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTA 217
           Q++++G   + ++ +     G V+  QG + L+++G+E  ++ L+  L L RE+G ++TA
Sbjct: 46  QIHFIGNYSLVLIAVSGLFVGFVLGLQGYYTLNKYGSEQ-ALGLLVALSLTRELGPVVTA 104

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+++ AEIG MK  E++ A+  M ++ ++ +++PR WA +I++P+L  + +  
Sbjct: 105 LLFAGRAGTSLTAEIGLMKAGEQLSAMEMMAVNPLQRVLAPRFWAGVIAMPILAAIFSAV 164

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFAVG 336
            I+G  IV  +   +    F+S+      + N I  G+IK+     A+  +A+ +G+   
Sbjct: 165 GILGGYIVGVQLIGVDEGAFWSQMQGGVDVWNDIVNGVIKSIVFGFAVTFIALYQGYEAQ 224

Query: 337 VHSNSLGKKVT-TCVVQSISIVIIIDSLFAIFYFA 370
                + +  T T V+ S+S V+ +D L     F+
Sbjct: 225 PTPEGVARATTRTVVIASLS-VLWLDFLLTALMFS 258


>gi|167947559|ref|ZP_02534633.1| hypothetical protein Epers_13847 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 132

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 50/127 (39%), Positives = 82/127 (64%)

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           QL  FGA+I+  +L+ +  +RE+G ++TA+++AGR+GSA  A++GSM++NEE+DA+RT G
Sbjct: 6   QLQMFGAQIYVANLVGLGMVREMGAMMTAIIMAGRTGSAYAAQLGSMQVNEEVDALRTFG 65

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +  +  L+ PR  +LI+ LPLL I ++   I+G  IV     DI    +  +      L 
Sbjct: 66  ISPMEYLVLPRSLSLILMLPLLCIWSDVLGIVGGLIVAAALLDISLLHYLQQTQEAINLM 125

Query: 309 NIFTGLI 315
           ++ TG+I
Sbjct: 126 DVLTGMI 132


>gi|114769304|ref|ZP_01446930.1| ABC transporter, inner membrane subunit [alpha proteobacterium
           HTCC2255]
 gi|114550221|gb|EAU53102.1| ABC transporter, inner membrane subunit [alpha proteobacterium
           HTCC2255]
          Length = 259

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 108/204 (52%), Gaps = 1/204 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           ++ Q+  +G   +PVV L +  TGA +A Q      +F AE     +++I  +RE+G +L
Sbjct: 46  VLSQLMQIGFYSLPVVGLTALFTGAALALQIYSGGVRFSAESVVPSIVAIGMVRELGPVL 105

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
             +M+AGR  S+I AE+G+M++ E++DA+ T+  D ++ L++PR+ A  I++P+L  + +
Sbjct: 106 GGLMVAGRVSSSIAAELGTMRVTEQLDALVTLSTDPMKYLVAPRVLAATIAMPILVAVGD 165

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              I+G  +V           +         L +I +GL KA      I ++    G+  
Sbjct: 166 TIGILGGYLVGTGRLGFNSNNYLQNTVDFMELEDITSGLAKAAVFGFIIALMGCYHGYNS 225

Query: 336 GVHSNSLGKKVTTCVVQSISIVII 359
           G  +  +GK     VV S S++I+
Sbjct: 226 GRGAQGVGKATINAVV-SASVMIL 248


>gi|42523258|ref|NP_968638.1| ABC transporter permease protein [Bdellovibrio bacteriovorus HD100]
 gi|39575463|emb|CAE79631.1| ABC transporter permease protein [Bdellovibrio bacteriovorus HD100]
          Length = 274

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 113/212 (53%), Gaps = 1/212 (0%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           Q+Y+ G   +P++ +++  TG++I  Q    LS  G      + + ++ +RE G LL A+
Sbjct: 54  QIYFTGWQALPLISVLALGTGSIILLQSLSNLSLLGGTQMIGNFLIVMIVREAGPLLVAL 113

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++  RSG+A+ +E+G+M+ N EI+A+ +MG++ +  ++ PR+   IIS+  L    NF A
Sbjct: 114 VVIARSGTAVASEVGNMRANREIEALESMGINPLSFIVFPRVLGGIISVLGLAFYFNFIA 173

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           +IG  +V     D+P A +           ++   L+K  F    I +V   +G +V   
Sbjct: 174 LIGGFLVTKFVQDLPLAFYTDSLMRAFAKEDVLIFLLKNGFSGMIIFVVCCYQGLSVKRS 233

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLF-AIFYF 369
            + + +  T  VV SI  V++ + +  A+FY 
Sbjct: 234 PHEVPQVTTQAVVNSIIFVVVFNLIVTALFYL 265


>gi|153846369|ref|ZP_01993858.1| ABC-type transport system, permease component [Vibrio
           parahaemolyticus AQ3810]
 gi|149744914|gb|EDM56276.1| ABC-type transport system, permease component [Vibrio
           parahaemolyticus AQ3810]
          Length = 220

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 45/99 (45%), Positives = 66/99 (66%)

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G   VP+++LI F+ G +IA +      QFGA +F  D + I   RE+G L+TA++ AGR
Sbjct: 106 GADAVPIILLIGFLMGVIIAFEIGLVAQQFGAVLFVADGIGISMFRELGPLMTAIVFAGR 165

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
           +G+A  AEIG+ K+NEEI+A+ T G+  V  L+ PRI+A
Sbjct: 166 TGAAFAAEIGTQKVNEEINALHTFGICPVEFLVIPRIYA 204


>gi|241762837|ref|ZP_04760900.1| protein of unknown function DUF140 [Acidovorax delafieldii 2AN]
 gi|241368012|gb|EER62217.1| protein of unknown function DUF140 [Acidovorax delafieldii 2AN]
          Length = 260

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 117/219 (53%), Gaps = 2/219 (0%)

Query: 155 SLIR-QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
            L+R Q++++G   + ++ +     G V+A QG + L  FG+      L+++  LRE+G 
Sbjct: 42  GLVRDQVHFLGNYSLAIIAVSGLFVGFVMALQGYYTLQDFGSTEALGQLVALSLLRELGP 101

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           ++TA++ AGR+G+++ AEIG M+  E++ A+  M +D VR ++ PR WA +I++P+L  +
Sbjct: 102 VITALLFAGRAGTSLTAEIGLMRAGEQLSAMEMMAVDPVRRILVPRFWAGVIAMPVLATV 161

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
            +   ++G  +V      +    F+S+      + +++   LIK+      +  VA+ +G
Sbjct: 162 FSAVGVMGGWVVAVVMIGLDGGAFWSQMQGGVDVFSDLGNSLIKSLVFGFTVTFVALLQG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           +        + +  T  VV +   V+ +D +     F+I
Sbjct: 222 YTAKPTPEGVSRATTRTVVMASLAVLALDFVLTATMFSI 260


>gi|207109506|ref|ZP_03243668.1| hypothetical protein HpylH_09844 [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 137

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/139 (37%), Positives = 83/139 (59%), Gaps = 8/139 (5%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---VP 169
            +GK IV+  N   +  +  G+++     F  S +  K F ++ +  +Y++  SG   +P
Sbjct: 4   KLGKSIVETYNTFLNAFNFCGMILF---YFIKSVFNPKRFCITPL--LYHINESGFKVLP 58

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V IL  F+ G  +A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  
Sbjct: 59  VSILTVFIVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFT 118

Query: 230 AEIGSMKINEEIDAIRTMG 248
           A+IG MKI EE+DA++TMG
Sbjct: 119 AQIGVMKITEELDAMKTMG 137


>gi|78186330|ref|YP_374373.1| putative ABC transport system permease protein [Chlorobium luteolum
           DSM 273]
 gi|78166232|gb|ABB23330.1| putative ABC transport system permease protein [Chlorobium luteolum
           DSM 273]
          Length = 256

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 115/218 (52%)

Query: 144 ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203
           A+  K + +    + Q    G   +P+V++ +   G+++A +    L  FGA+       
Sbjct: 28  ATMPKIRRYWRDFLDQAAICGADSIPIVLVSAISIGSLLAIEVGNLLEDFGAKTMLGRST 87

Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263
           SI  +RE+G LL  +M++ R GS   AE+G+M+I+E+IDA+R  G D V  L+ PR+ A 
Sbjct: 88  SISVIRELGPLLMGLMLSARFGSRNGAELGAMQISEQIDALRAFGTDPVAKLVMPRLLAA 147

Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323
           +I    LT L++F+ +  A+ +   Y+ +   +F++  +    L +   G  KAP  A  
Sbjct: 148 LIMFLPLTALSDFAGLYSAAYMAEHYHHLDPGIFWNSVYPRLALKDFVVGFAKAPVFAVI 207

Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           I +V+   GF+    ++ +G+     +V S  +V+I +
Sbjct: 208 ITLVSSFNGFSASGGTSGVGRSTIKGIVVSSGLVLIAN 245


>gi|171058394|ref|YP_001790743.1| hypothetical protein Lcho_1711 [Leptothrix cholodnii SP-6]
 gi|170775839|gb|ACB33978.1| protein of unknown function DUF140 [Leptothrix cholodnii SP-6]
          Length = 369

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 121/253 (47%), Gaps = 18/253 (7%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           IG ++     +  + A   G V+   G         +G  + L RQ+   G   VP+V L
Sbjct: 112 IGHRLAISWVECMATAAFFGEVLIALGRLLRGRSDLQG--VDLWRQVDQAGPLSVPIVSL 169

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
             F+ G ++A  G  QL + GA  F  D++++  +RE+  L+T V++AGR G+A  A+IG
Sbjct: 170 TCFLVGLMLAYMGGAQLHRIGAPSFIPDVVTVGMVRELAGLMTGVILAGRLGAAFAAQIG 229

Query: 234 SMKINEEIDAIRTMGLDFV--------RILISPRIWALIISLPLLTILANFSAIIGASIV 285
           SM+  EEIDA+R +G+D +          L+      + I + L+ +LA   A + A   
Sbjct: 230 SMQAGEEIDALRALGVDPIGYLVLPRLLALLLVAPMLVAIGM-LVGVLAGLPAAVAA--- 285

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
               Y +    +  +  +  T  +++ GL K       + +   +EG   G  + ++G  
Sbjct: 286 ----YGLSPTEYLHKSAAALTWTHLWIGLFKGMMYLGLVALAGCREGLRAGRDAQAVGAA 341

Query: 346 VTTCVVQSISIVI 358
            TT VV+++  ++
Sbjct: 342 TTTAVVKALVWIV 354


>gi|218961658|ref|YP_001741433.1| hypothetical protein; putative membrane protein [Candidatus
           Cloacamonas acidaminovorans]
 gi|167730315|emb|CAO81227.1| hypothetical protein; putative membrane protein [Candidatus
           Cloacamonas acidaminovorans]
          Length = 253

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 111/209 (53%)

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           LL +IRQ+ + GV  +P++  I+   G +   QG   LS FG  I+   ++  + + E+ 
Sbjct: 34  LLVVIRQILFTGVEALPLIGFIALAIGCLTIMQGYAFLSNFGQGIWVHIILVRVVVGELS 93

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            ++TA+++  RSG+AI  E+G+M +N E+  +++  +  +  L+  RI  ++IS+ +LT+
Sbjct: 94  GIITALVVIARSGTAISTELGNMVVNREMQLLKSFDIAPMGYLVVSRILGVVISMLVLTL 153

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
             N  A++G  +    +  + F  F + F S  T   I   ++K+      I I A  EG
Sbjct: 154 YFNIIAVLGGWLFAQFFNHLSFGAFMNDFLSVLTFPYILMTILKSVIFGFVIAITASYEG 213

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            +V   S  + ++    VV SI  V+I+D
Sbjct: 214 MSVYRASTEVPQRTIKAVVISIFSVLILD 242


>gi|262370600|ref|ZP_06063925.1| toluene tolerance protein Ttg2B [Acinetobacter johnsonii SH046]
 gi|262314400|gb|EEY95442.1| toluene tolerance protein Ttg2B [Acinetobacter johnsonii SH046]
          Length = 259

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 108/199 (54%), Gaps = 2/199 (1%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + QMY VGV  + ++++     GAV+  Q    L  FG+E      +++  LRE+  ++ 
Sbjct: 42  VYQMYRVGVLSLLIIVVSGLFIGAVLGLQMYSILVTFGSEAMLGTAVALTLLRELAPVVA 101

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+GSA+ AEIG MK  E++ ++  +G+D ++ +ISPR+WA I SLP+L+++   
Sbjct: 102 ALLFAGRAGSALTAEIGLMKATEQLSSMEMIGVDPLKRVISPRLWAGIFSLPMLSVIFAA 161

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTG-LIKAPFMACAIGIVAMKEGFA 334
             I+G  +V   +       ++S   S+     ++  G +IK+   A     +A+ +G+A
Sbjct: 162 VGIMGGKMVGVDFLGADEGSYWSGIQSSVEFYKDVLNGTIIKSFVFALICTWIAVYQGYA 221

Query: 335 VGVHSNSLGKKVTTCVVQS 353
               S  +    T  VV S
Sbjct: 222 CEPTSEGIATSTTRTVVYS 240


>gi|121593173|ref|YP_985069.1| hypothetical protein Ajs_0749 [Acidovorax sp. JS42]
 gi|222109932|ref|YP_002552196.1| hypothetical protein Dtpsy_0717 [Acidovorax ebreus TPSY]
 gi|120605253|gb|ABM40993.1| protein of unknown function DUF140 [Acidovorax sp. JS42]
 gi|221729376|gb|ACM32196.1| protein of unknown function DUF140 [Acidovorax ebreus TPSY]
          Length = 260

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 119/220 (54%), Gaps = 4/220 (1%)

Query: 155 SLIR-QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIG 212
            L+R Q++++G   + ++ +     G V+A QG   L  +G+   S+ L+  L L RE+G
Sbjct: 42  GLVRDQVHFLGNYSLSIIAMSGLFVGFVLALQGYNVLQLYGSA-NSLGLVVTLGLVRELG 100

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            ++TA++ AGR+G+++ AEIG M+  E++ A+  M +D VR +++PR W  +I++PLL +
Sbjct: 101 PVVTALLFAGRAGTSLTAEIGLMRAGEQLSAMEMMAVDPVRRILAPRFWGGVIAMPLLAL 160

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331
           + N   +IG  +V      +    F+ +  S   +  ++  G++K+     A+  +A+ +
Sbjct: 161 VFNAVGVIGGWLVGVVLIGVDGGAFWGQMQSGVDVWKDVGNGIVKSLAFGVAVTFIAVLQ 220

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           GF        + +  T  VV +   V+ +D +     F+I
Sbjct: 221 GFVAKPTPEGVSRATTRTVVMASLSVLGLDFVLTALMFSI 260


>gi|288942538|ref|YP_003444778.1| hypothetical protein Alvin_2840 [Allochromatium vinosum DSM 180]
 gi|288897910|gb|ADC63746.1| protein of unknown function DUF140 [Allochromatium vinosum DSM 180]
          Length = 259

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 114/217 (52%), Gaps = 3/217 (1%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           L  Q++ +GV  + +V +     G V+A QG + LSQFGA   S+ +M    L RE+G +
Sbjct: 43  LWEQLFNIGVLSLLIVGVSGLFVGMVLALQGYYVLSQFGAA-ESLGVMVAASLVRELGPV 101

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA+++AGR+GSA+ AEIG MK  E++  +  M +D VR ++ PR    ++S+PLL  + 
Sbjct: 102 VTALLVAGRAGSALTAEIGLMKATEQLSGLEMMAVDPVRRILVPRFVGGVLSMPLLAAIF 161

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGF 333
           +   ++G   V      +    ++S+  +      ++  G+IK+      +  VA+ +G+
Sbjct: 162 SAVGVLGGYFVGVGLLGVDEGAYWSQMQAKIDFDEDLVNGVIKSLAFGVVVTWVALFQGY 221

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                S  + +  T  VV +  +V+ +D +     F 
Sbjct: 222 DTVPTSEGVSRSTTRAVVHAALVVLGLDFVLTALMFG 258


>gi|23014157|ref|ZP_00053989.1| COG0767: ABC-type transport system involved in resistance to
           organic solvents, permease component [Magnetospirillum
           magnetotacticum MS-1]
          Length = 258

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 112/216 (51%), Gaps = 4/216 (1%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           ++R+   +G   +PVV L +  TG V+A Q     S+F AE     ++ +   RE+  +L
Sbjct: 43  ILREFVEIGYFSLPVVGLTAVFTGMVLALQSYSGFSRFAAEGAVATVVVLSVTRELAPVL 102

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
             +M+AGR G+++ AEIG+M++ E+IDA+ T+  +  + L++PRI A  + LP L ++A+
Sbjct: 103 AGLMVAGRIGASMAAEIGTMRVTEQIDALTTLSTNPFKYLVAPRILAGTLMLPFLVLIAD 162

Query: 276 FSAIIGASIVIWKYYDIPF--AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
              + G  IV    Y + F  A + +R        ++ +GL KA      I ++    G+
Sbjct: 163 IIGVFGGYIV--GVYKLGFNSATYIARTWEFLEPLDVISGLTKAAVFGFLITLMGCYNGY 220

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
                +  +G   T  VV +  ++++ + +    +F
Sbjct: 221 YSKGGAQGVGAATTNAVVSAAIMILVFNYIITAMFF 256


>gi|167838138|ref|ZP_02464997.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           thailandensis MSMB43]
          Length = 255

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 118/214 (55%), Gaps = 1/214 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q++++G     ++ +     G V+  QG + L+++G+E     L+++  +RE+G +++A
Sbjct: 42  KQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVSA 101

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+++ AEIG MK  E++ A+  M +D ++ +I+PR+WA +I++PLL  + +  
Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPLKNVIAPRMWAGVIAMPLLAAIFSAV 161

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            ++G  IV      +    F+S+      + A++  G++K+     A+  +A+ +G+   
Sbjct: 162 GVLGGYIVGVLLIGVDPGAFWSQMQGGVEVWADVGNGVLKSVVFGFAVTFIALFQGYEAK 221

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                +    T  VV +   V+ +D L     F+
Sbjct: 222 PTPEGVSHATTKTVVYASLAVLGLDFLLTALMFS 255


>gi|85860995|ref|YP_463197.1| ABC transporter permease [Syntrophus aciditrophicus SB]
 gi|85724086|gb|ABC79029.1| ABC transporter permease protein [Syntrophus aciditrophicus SB]
          Length = 381

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 180/376 (47%), Gaps = 26/376 (6%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           V R +G+W +      A+++  A+++ I +   I D+  +   D+     ++ F+ K   
Sbjct: 22  VLRLSGDWMANGRLPDAEEIRQALSQQIPAPRIIFDVVGLGAWDSG----LLIFLAKVFD 77

Query: 68  KIKLQGVSTH-------IEQLFSLISFT-HRKKIKNQKPQRSFFYN-SFKNLHYHIG-KK 117
             +  G+S         + +L  L S    R  +  +K   SF    +   L +  G K 
Sbjct: 78  ICRGNGISVDSSGLPPGVCRLLELASPEKQRSGVTREKSPPSFLVRVADATLDFGRGFKD 137

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           ++ F+ D+     +L ++    G        F+   L LI Q    G   +P+V LIS +
Sbjct: 138 MLAFVGDA--TLSVLRMLRGKPG--------FRRSDLILILQ--ETGAQALPIVSLISLL 185

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G ++A   A QL  FG +I+  D++ I  +R +G ++T +++AGR+G+A  A++G M++
Sbjct: 186 VGMILAFVAAIQLRMFGVQIYVADVVGIAMVRVMGAIMTGIIMAGRTGAAFAAQLGMMQV 245

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
           NEEIDA+  +G+  V  L+ PR+ AL++ +PLL I ++   ++G  IV     D+    +
Sbjct: 246 NEEIDALEVLGVSPVDFLVLPRLLALMLMMPLLCIYSDLMGVVGGLIVGVGMLDLGVIEY 305

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
           +    +  +L   + GL  +      + +     G     +++++G   T+ VV  I  +
Sbjct: 306 YHETVNAVSLTYFWIGLFHSFVFGVLVALAGCLRGLQCERNASAVGFAATSAVVTGIVSI 365

Query: 358 IIIDSLFAIFYFAIGI 373
           ++  ++  +    +GI
Sbjct: 366 VVATAIITLLCQVLGI 381


>gi|42525131|ref|NP_970511.1| ABC-type organic solvent resistance transporter, permease protein.
           [Bdellovibrio bacteriovorus HD100]
 gi|39577342|emb|CAE81165.1| ABC-type organic solvent resistance transporter, permease protein
           [Bdellovibrio bacteriovorus HD100]
          Length = 259

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 103/204 (50%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
            Q++ V V   P   +  F  GA++  Q A Q+ +FGA  +   L +    RE+G LL A
Sbjct: 37  EQIWKVTVDSFPTTAMAGFFVGAIMTVQFAMQVKEFGALGYLGALATSATFREVGPLLIA 96

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
            M++G+ G+   AE+G+MK+ E+IDA+R +G D ++ +I PR   +I+S   L       
Sbjct: 97  FMLSGKVGAFTSAELGTMKVTEQIDAVRCLGADPIQEIIVPRFVGIIVSSFFLLAAGLMM 156

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           ++ G  ++   +  + +  +        +  +I +GL+K    A  +  +   +G+A   
Sbjct: 157 SVFGGMLLGELFAGVNYEEYLRHVPLIVSPVSILSGLVKCGTFAVVLATICTYQGYATTG 216

Query: 338 HSNSLGKKVTTCVVQSISIVIIID 361
            +  +G+ V    V ++  ++++D
Sbjct: 217 GAKGVGRAVVATAVTTMICIVVMD 240


>gi|73542805|ref|YP_297325.1| hypothetical protein Reut_A3121 [Ralstonia eutropha JMP134]
 gi|72120218|gb|AAZ62481.1| Protein of unknown function DUF140 [Ralstonia eutropha JMP134]
          Length = 258

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 119/213 (55%), Gaps = 1/213 (0%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           Q+++VG   + ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA+
Sbjct: 46  QIFFVGNLSLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVITAL 105

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           + AGR+G+++ AEIG MK  E++ A+  M ++ ++ +I+PR WA ++++P+L  + +   
Sbjct: 106 LFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVNPLQRVIAPRFWAGVVAMPVLAAIFSAVG 165

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           ++G  +V  +   +    F+S+  +   +  ++  G+IK+     A+  +A+ +GF    
Sbjct: 166 VLGGYLVGVQLIGVDAGAFWSQMQAGVDVRDDVVNGVIKSFIFGIAVTFIALYQGFEAKP 225

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               + +  T  VV +   V+ +D L     F+
Sbjct: 226 TPEGVSRATTRTVVIASLAVLGLDFLLTALMFS 258


>gi|83311193|ref|YP_421457.1| ABC-type transport system involved in resistance to organic
           solvents [Magnetospirillum magneticum AMB-1]
 gi|82946034|dbj|BAE50898.1| ABC-type transport system involved in resistance to organic
           solvents [Magnetospirillum magneticum AMB-1]
          Length = 258

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 116/218 (53%), Gaps = 8/218 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE--IFSIDLMSILQLREIGV 213
           ++R+   +G   +PVV L +  TG V+A Q     S+F AE  + ++ ++S+   RE+  
Sbjct: 43  ILREFIEIGYFSLPVVGLTAVFTGMVLALQSYSGFSRFAAEGAVATVVVLSVT--RELAP 100

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           +L  +M+AGR G+++ AEIG+M++ E+IDA+ T+  +  + L++PRI A  + LP L ++
Sbjct: 101 VLAGLMVAGRIGASMAAEIGTMRVTEQIDALTTLSTNPFKYLVAPRILAGTLMLPFLVLI 160

Query: 274 ANFSAIIGASIVIWKYYDIPF--AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
           A+   + G  IV    Y + F  A + +R        ++ +GL KA      I ++    
Sbjct: 161 ADIIGVFGGYIV--GVYKLGFNSATYIARTWEFLEPLDVISGLTKAAVFGFLITLMGCYN 218

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           G+     +  +G   T  VV +  ++++ + +    +F
Sbjct: 219 GYYSKGGAQGVGAATTNAVVSAAIMILVFNYVITAMFF 256


>gi|258546129|ref|ZP_05706363.1| membrane protein [Cardiobacterium hominis ATCC 15826]
 gi|258518554|gb|EEV87413.1| membrane protein [Cardiobacterium hominis ATCC 15826]
          Length = 263

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 129/246 (52%), Gaps = 12/246 (4%)

Query: 119 VKFINDSCSQAHILGLV-ISNTGEFCASSYKF--------KGFLLSLIRQMYYVGVSGVP 169
           +KF++D  +      L  ++  G+FC  +           +  LL+L R  Y  GV  +P
Sbjct: 1   MKFVSDFLAAVGATTLACLAALGDFCLFALALLRHVAILLRKPLLTL-RATYAAGVLSLP 59

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++++     G V++ Q    + +FGAE     ++++  LRE+G +++A++ AGR+GSAI 
Sbjct: 60  IILVAGLFVGMVLSFQAYTTMVRFGAEQALGTMVALSLLRELGPVVSALLFAGRAGSAIT 119

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M ++ V  +  PR      +LPLLTIL    AIIGA +V   Y
Sbjct: 120 AEIGLMKTTEQLVAMEMMAIEPVAQVGVPRFLGAWFALPLLTILFVAVAIIGAHLVGVVY 179

Query: 290 YDIPFAVFFSRFHSTATL-ANIFTG-LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
             +   +F+S   ++    +++  G L+K+         +A+ +GF+    ++ + +  T
Sbjct: 180 LGLDDGIFWSGMQNSVDFGSDVVRGMLLKSLVFGWVCAAIAVFQGFSSLPTASGMSRATT 239

Query: 348 TCVVQS 353
           T VV S
Sbjct: 240 TTVVMS 245


>gi|224373004|ref|YP_002607376.1| abc transporter, permease protein [Nautilia profundicola AmH]
 gi|223589585|gb|ACM93321.1| abc transporter, permease protein [Nautilia profundicola AmH]
          Length = 259

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 102/213 (47%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +  Q+ ++G   + V+ L SF TG V A Q      +FG E F    + I   +E+G + 
Sbjct: 44  IFEQINFMGFGSLGVIFLTSFFTGLVEAVQLYNGFHKFGVEDFMGYTIFISICKELGPVF 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A+M+  R  SA  AE+GSM++ E+IDA+  M +D  + LI PRI   IISLPLL +  +
Sbjct: 104 AALMVVSRGISAYAAELGSMRVTEQIDALDVMAVDSKQYLIVPRIIGTIISLPLLILFFD 163

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             A IGA ++     D+    +         L +   G++K       I  V    G+  
Sbjct: 164 AVANIGAYLISVYTLDVNGYTYIENIKQFGELGDFTEGIVKGIVFGYLISAVGTYIGYNT 223

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
              +  +G   T  VV S  ++ + D + + FY
Sbjct: 224 RGGAKGVGVSTTKAVVISSILIFVADYIVSAFY 256


>gi|148360512|ref|YP_001251719.1| toluene tolerance protein Ttg2B [Legionella pneumophila str. Corby]
 gi|296106421|ref|YP_003618121.1| toluene tolerance protein [Legionella pneumophila 2300/99 Alcoy]
 gi|148282285|gb|ABQ56373.1| toluene tolerance protein Ttg2B [Legionella pneumophila str. Corby]
 gi|295648322|gb|ADG24169.1| toluene tolerance protein [Legionella pneumophila 2300/99 Alcoy]
          Length = 260

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 115/214 (53%), Gaps = 2/214 (0%)

Query: 153 LLSLIR-QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211
           L  L+R Q+Y++GV    ++++ +   G V+  QG   L +FGA      L+++   RE+
Sbjct: 39  LWPLLRYQLYFIGVLSCLIIVVSALFIGMVVGLQGYNTLQKFGASSQLGQLLALSVAREL 98

Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271
           G +++A++ AGR+GSA+ AEIG MK  E++ ++  MG+D +  ++ PR  A  I+LP+L 
Sbjct: 99  GPVISALLFAGRAGSALTAEIGLMKATEQLSSMDMMGVDPLGRVVYPRFAAGFIALPILA 158

Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMK 330
           ++ +  AI G   +   +  +    F+S   +      +I +G+IK+   A  +  +++ 
Sbjct: 159 LIFSAVAIYGGYFIGVYWLGVDAGSFWSNMQAAVNFRIDILSGIIKSLVFAFVVTWISVY 218

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           +GF     +  +    T  VV S   V+ +D L 
Sbjct: 219 QGFECVPTAEGISHATTKTVVYSSLAVLGLDFLL 252


>gi|238025995|ref|YP_002910226.1| ABC transporter inner membrane subunit [Burkholderia glumae BGR1]
 gi|237875189|gb|ACR27522.1| ABC transporter, inner membrane subunit [Burkholderia glumae BGR1]
          Length = 255

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 119/215 (55%), Gaps = 3/215 (1%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLT 216
           +Q++++G     ++ +     G V+  QG + L+++GAE  S+ L+  L L RE+G ++T
Sbjct: 42  KQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGAEQ-SLGLLVALSLVRELGPVVT 100

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+G+++ AEIG MK  E++ A+  M +D ++ +I+PR+WA II++PLL+ +   
Sbjct: 101 ALLYAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPIKTVIAPRMWAGIIAMPLLSAIFCA 160

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTA-TLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             +IG  +V      +    F+S+        +++  G++K+     A+  VA+ +G+  
Sbjct: 161 VGVIGGYVVGVILIGVDPGAFWSQMQGGVDAWSDVGNGVLKSVVFGFAVTFVALYQGYEA 220

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                 + +  T  VV +   V+ +D L     F+
Sbjct: 221 KPTPEGVSRATTRTVVYASLAVLGLDFLLTALMFS 255


>gi|52841078|ref|YP_094877.1| toluene tolerance protein Ttg2B [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|54293817|ref|YP_126232.1| hypothetical protein lpl0873 [Legionella pneumophila str. Lens]
 gi|54296863|ref|YP_123232.1| hypothetical protein lpp0904 [Legionella pneumophila str. Paris]
 gi|52628189|gb|AAU26930.1| toluene tolerance protein Ttg2B [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|53750648|emb|CAH12055.1| hypothetical protein lpp0904 [Legionella pneumophila str. Paris]
 gi|53753649|emb|CAH15107.1| hypothetical protein lpl0873 [Legionella pneumophila str. Lens]
 gi|307609634|emb|CBW99138.1| hypothetical protein LPW_09231 [Legionella pneumophila 130b]
          Length = 260

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 115/214 (53%), Gaps = 2/214 (0%)

Query: 153 LLSLIR-QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211
           L  L+R Q+Y++GV    ++++ +   G V+  QG   L +FGA      L+++   RE+
Sbjct: 39  LWPLLRYQLYFIGVLSCLIIVVSALFIGMVVGLQGYNTLQKFGASSQLGQLLALSVAREL 98

Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271
           G +++A++ AGR+GSA+ AEIG MK  E++ ++  MG+D +  ++ PR  A  I+LP+L 
Sbjct: 99  GPVISALLFAGRAGSALTAEIGLMKATEQLSSMDMMGVDPLGRVVYPRFVAGFIALPILA 158

Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMK 330
           ++ +  AI G   +   +  +    F+S   +      +I +G+IK+   A  +  +++ 
Sbjct: 159 LIFSAVAIYGGYFIGVYWLGVDAGSFWSNMQAAVNFRIDILSGIIKSLVFAFVVTWISVY 218

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           +GF     +  +    T  VV S   V+ +D L 
Sbjct: 219 QGFECVPTAEGISHATTKTVVYSSLAVLGLDFLL 252


>gi|264676838|ref|YP_003276744.1| hypothetical protein CtCNB1_0702 [Comamonas testosteroni CNB-2]
 gi|299529658|ref|ZP_07043095.1| hypothetical protein CTS44_02750 [Comamonas testosteroni S44]
 gi|262207350|gb|ACY31448.1| hypothetical conserved protein [Comamonas testosteroni CNB-2]
 gi|298722521|gb|EFI63441.1| hypothetical protein CTS44_02750 [Comamonas testosteroni S44]
          Length = 258

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 118/215 (54%), Gaps = 3/215 (1%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG-AEIFSIDLMSILQLREIGVLLTA 217
           Q++++G   + ++ +     G V+  QG + L ++G AE   + ++++  LRE+G ++TA
Sbjct: 45  QIHFLGNYSLAIIGVSGLFVGFVLGLQGYYILQRYGSAEALGM-MVALSLLRELGPVVTA 103

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+A+ AEIG MK  E++ A+  M +D V+ +++PR WA +I++PLL  + +  
Sbjct: 104 LLFAGRAGTALTAEIGLMKAGEQLSAMEMMAVDPVKRILAPRFWAGLITMPLLAAVFSAV 163

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            ++G  +V      +    F+ +        +++  G++K+     A+  VA+ EG+A  
Sbjct: 164 GVLGGWLVGVVMIGVDSGAFWGQMQQGVDWWSDLGNGVLKSFVFGLAVTFVALLEGYAAK 223

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
                + +  T  VV +   V+ +D L     F+I
Sbjct: 224 PTPEGVSRATTRTVVVASLAVLGLDFLLTATMFSI 258


>gi|186684564|ref|YP_001867760.1| hypothetical protein Npun_F4449 [Nostoc punctiforme PCC 73102]
 gi|186467016|gb|ACC82817.1| protein of unknown function DUF140 [Nostoc punctiforme PCC 73102]
          Length = 218

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 105/213 (49%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           ++ +   G   +  V+L+S   G +   Q A +L +FGAE       ++   RE+  +LT
Sbjct: 1   MQHLVTAGPGSISPVLLVSGFAGMIFTIQTARELVRFGAENAVGGAFALAFCRELAPILT 60

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A ++AG+ GSA  AEIG+M++ E+IDA+  +  D +  L+ PR+ A  + +PL+TILA  
Sbjct: 61  ASIMAGQVGSAFAAEIGAMRVTEQIDALYMLKTDPIDYLVLPRVIACCLMVPLMTILALV 120

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           + IIG       +Y I    F     +    +++F  L+K       + ++    G    
Sbjct: 121 TGIIGGVFAGSYFYKIIPETFLESVRNFLEPSDLFIILLKGFIFGVLVAVIGCSWGLTTK 180

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
             +  +G+  T  VV S   + I+D   ++  F
Sbjct: 181 GGAKEVGESATKAVVTSWVSIFIMDFFLSLLLF 213


>gi|268316272|ref|YP_003289991.1| hypothetical protein Rmar_0705 [Rhodothermus marinus DSM 4252]
 gi|262333806|gb|ACY47603.1| protein of unknown function DUF140 [Rhodothermus marinus DSM 4252]
          Length = 269

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 111/222 (50%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G F    ++    +  LI QM   G     +  +     G V+A Q    L++FGAE   
Sbjct: 34  GRFFRDVWRPPYEVRELINQMDEAGSKSFILTAVTGIAIGVVLAMQSRGTLARFGAEAVL 93

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
            +++++   +EIG ++T++++AGR G+ + AEIGSM++ E+IDA+    L     L+  R
Sbjct: 94  PNMLALSVFKEIGPVITSLVLAGRLGAGMAAEIGSMRVTEQIDALEVAALKPFHYLVITR 153

Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319
           + A I+  P+LT   N  A+ G  +      D+ + +F++   S+   +++    +K   
Sbjct: 154 VVACIVMFPVLTTWTNMIALAGGYVESVISADMDYRLFWNSAFSSLRFSDLIVDTLKTSV 213

Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
               +GIV+   G+ V   +  +G+     VV S  ++++ D
Sbjct: 214 FGFLVGIVSCYLGYTVRGGTREVGQAAMQAVVISSLLILLAD 255


>gi|145219305|ref|YP_001130014.1| hypothetical protein Cvib_0490 [Prosthecochloris vibrioformis DSM
           265]
 gi|145205469|gb|ABP36512.1| protein of unknown function DUF140 [Chlorobium phaeovibrioides DSM
           265]
          Length = 264

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 114/213 (53%), Gaps = 2/213 (0%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           K + +    + Q    G   +P+V++ +   G+++A +    L  FGA+       SI  
Sbjct: 40  KIRRYWRDFLDQAKICGADSIPIVLVSAISIGSLLAIEVGNLLEDFGAKTMLGRSTSISV 99

Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR-IWALIIS 266
           +RE+G LL  +M++ R GS   AE+G+MKI+E+IDA+R  G D +  L+ PR + ALI+ 
Sbjct: 100 IRELGPLLMGLMLSARFGSRNGAELGAMKISEQIDALRAFGTDPIAKLVMPRLVAALIMF 159

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326
           LP LT L++F+ +  A+ +   Y+ +   +F++  +    L +   G  KAP  A  I +
Sbjct: 160 LP-LTALSDFAGLYSAAYMAEHYHHLDPGIFWNSVYPRLALKDFVVGFAKAPVFAVIITL 218

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           V+   GF+    +  +G+     +V S  +V+I
Sbjct: 219 VSSFNGFSASGGTAGVGRSTIKGIVVSSGLVLI 251


>gi|149921451|ref|ZP_01909903.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Plesiocystis pacifica
           SIR-1]
 gi|149817654|gb|EDM77121.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Plesiocystis pacifica
           SIR-1]
          Length = 251

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 103/206 (50%), Gaps = 1/206 (0%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           VPV + ++ V GAVI+ QG      FGAE      +    +RE    L +VM+A ++GS+
Sbjct: 47  VPVGLAVAPV-GAVISLQGIAVFKLFGAERMLSAFLGTAIIREYSPALASVMVAAQAGSS 105

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A IG+MK+  +IDA+  M +D VR ++ P + A ++  PLL+++ N   I+   I   
Sbjct: 106 IAARIGTMKVRGQIDALAVMSVDPVRYVVVPGVLACVLVTPLLSVVTNLLGILSGWIFAV 165

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
               +    F     +  T  +++ GL K       +G++A   G  VG  +  +GK   
Sbjct: 166 PLGGVDHGAFMDNLTAQITPMDLWVGLGKCAVFGLGVGMIAGYLGLNVGRGAADVGKAAN 225

Query: 348 TCVVQSISIVIIIDSLFAIFYFAIGI 373
             VV +I +++  D + ++     G+
Sbjct: 226 DTVVSTIVLILFTDYVVSMALLGAGL 251


>gi|159029293|emb|CAO90159.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 264

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 105/198 (53%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + QM  VG   + + ++ +   G V   Q A +   FGA  F   ++S+   RE+  +LT
Sbjct: 43  LEQMSIVGPESLTIALITAAFVGMVFTIQVAREFIFFGAGSFVGGVLSLALTRELAPVLT 102

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV++AGR GSA  AEIG+M++ E+IDA+  +  D +  L+ PR+ A  + LPLLTI++  
Sbjct: 103 AVVVAGRVGSAFAAEIGTMRVTEQIDALYILKTDPIDYLVIPRVIACSLMLPLLTIISLV 162

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           + ++G  ++    Y + +++F     +     ++ + ++K+      I I+    G    
Sbjct: 163 TGLLGGLLISDSLYGVSYSLFLQSAQNFLQTWDLISSMLKSLIFGILIAIIGCSWGLTTT 222

Query: 337 VHSNSLGKKVTTCVVQSI 354
             +  +G+  TT VV S+
Sbjct: 223 GGAKGVGQSTTTAVVTSL 240


>gi|312795842|ref|YP_004028764.1| Toluene transport system permease [Burkholderia rhizoxinica HKI
           454]
 gi|312167617|emb|CBW74620.1| Toluene transport system permease [Burkholderia rhizoxinica HKI
           454]
          Length = 255

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 121/216 (56%), Gaps = 1/216 (0%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           ++I+Q++++G   + ++ +     G V+  QG   L+++G+E     L+++  +RE+G +
Sbjct: 39  TVIQQIHFLGNYSLVIIAVSGLFVGFVLGLQGYNTLNRYGSEQALGLLVALSLVRELGPV 98

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGR+G+++ AEIG MK  E++ A+  M +D +R++++PR WA +I++P+L  + 
Sbjct: 99  VTALLFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVDPIRVVVAPRFWAGVIAMPILAAIF 158

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGF 333
           +   I+G  +V      +    F+S+  S   L  +I  G+IK+     A+  VA+ +G+
Sbjct: 159 SAVGIVGGYVVGVVLIGVDPGAFWSQMQSGVDLRQDIGNGVIKSIVFGFAVTFVALFQGY 218

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
                   + +  T  VV +   V+ +D L     F
Sbjct: 219 EAKPTPEGVSRATTKTVVFASLAVLGLDFLLTALMF 254


>gi|300777429|ref|ZP_07087287.1| ABC superfamily ATP binding cassette transporter permease protein
           [Chryseobacterium gleum ATCC 35910]
 gi|300502939|gb|EFK34079.1| ABC superfamily ATP binding cassette transporter permease protein
           [Chryseobacterium gleum ATCC 35910]
          Length = 253

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 109/206 (52%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+ Q Y +G   + ++ +  F+ G V+  Q    L ++G E     ++ I  +REI  ++
Sbjct: 35  LLAQCYLIGYKSLGLISMTGFIIGLVLTMQLRPSLVRYGVESQLPVMVGIAIIREIAPVI 94

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++ AG+  S+I AE+GSM++ E+IDA+   G    + L++ R+ A    LP+L ILA+
Sbjct: 95  AALIFAGKIASSIGAELGSMRVTEQIDAMEVSGTHPFKYLVATRVLATTFMLPVLIILAD 154

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             ++ GA I +        ++F+S+   +   ++I    IK+ F   A+GIV   +G+  
Sbjct: 155 AISLYGAWIGVNIGGTTSLSLFYSQVFDSLDFSDIIPAFIKSFFFGFAVGIVGAYKGYNA 214

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361
              +  +G    + VV S  ++ ++D
Sbjct: 215 VKGTRGVGNAANSAVVLSSILIFVLD 240


>gi|289207570|ref|YP_003459636.1| hypothetical protein TK90_0385 [Thioalkalivibrio sp. K90mix]
 gi|288943201|gb|ADC70900.1| protein of unknown function DUF140 [Thioalkalivibrio sp. K90mix]
          Length = 260

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 111/215 (51%), Gaps = 1/215 (0%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           Q+Y VGV  + ++I+     G V+  QG   L  FGA      ++++  +RE+G ++TA+
Sbjct: 46  QIYSVGVRSLLIIIVSGLFVGMVLGYQGYITLVNFGAAEALGGVVALSLVRELGPVVTAL 105

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           + AGR+GSA+ AE+G MK  E++ A+  M ++  R + +PR  A  +S+PLL  + +   
Sbjct: 106 LFAGRAGSALTAELGLMKTTEQLSAMEMMAVNPYRRIFAPRFVAGFLSMPLLAAIFSAVG 165

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           ++G  IV      +    +FS+  S      ++ +G+IK+      +  +A+ +GF    
Sbjct: 166 VMGGYIVGVGMLGVDSGAYFSQMQSVTDWNEDVLSGVIKSIVFGFVVTWIAVFQGFNAMP 225

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
            S  + +  T  VV S   V+ +D +     F  G
Sbjct: 226 TSEGISRATTQTVVVSSLAVLGLDFILTGLMFGTG 260


>gi|194334499|ref|YP_002016359.1| hypothetical protein Paes_1694 [Prosthecochloris aestuarii DSM 271]
 gi|194312317|gb|ACF46712.1| protein of unknown function DUF140 [Prosthecochloris aestuarii DSM
           271]
          Length = 264

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 112/214 (52%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           K + +    + Q    G   +P+V++ S   GA++A +    L  FGA+       ++  
Sbjct: 40  KLRRYWRDFLDQATIAGTDSIPIVLVSSISIGALLAVEVGNLLEDFGAKTMLGRSTALSV 99

Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267
           +RE+G LL  +M++ R GS   AE+G+MKI+E+IDA+R  G D V  L+ PR+ A +I  
Sbjct: 100 IRELGPLLMGLMLSARYGSRNGAELGAMKISEQIDALRAFGTDPVAKLVMPRLAAALIVF 159

Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327
             LT +A+F+ +  A+ +   Y+ I   +F++       L +   G +KAP  A  I +V
Sbjct: 160 IPLTAIADFAGLHSAAWLAEHYHKIDPGIFWNAVFPRLVLKDFVVGFLKAPVFAIIITLV 219

Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           +   GF+    +  +G+     +V S  +++I +
Sbjct: 220 SSFNGFSATGGTAGVGRSTIKGIVVSSGLILIAN 253


>gi|148284291|ref|YP_001248381.1| ABC transporter permease protein [Orientia tsutsugamushi str.
           Boryong]
 gi|146739730|emb|CAM79561.1| ABC transporter permease protein [Orientia tsutsugamushi str.
           Boryong]
          Length = 301

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 114/202 (56%), Gaps = 5/202 (2%)

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTAVMIA 221
           +G   +P+V   S  +GAV+A Q  ++     + I +I ++ +  + RE+G ++  +++A
Sbjct: 91  IGFYSLPIVAATSLCSGAVLALQ-TYEGVVRSSAIHAIPMIIVTSITRELGPVIVGLIVA 149

Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281
           GR G++IVAEIG+M++ E+IDA+ T+  D ++ L++PR+ A  +SLP L + ++   + G
Sbjct: 150 GRIGASIVAEIGTMRVTEQIDALFTLATDPIKYLVTPRLVATTLSLPFLVLTSDVIGVFG 209

Query: 282 ASIV-IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
             +V +++     +    S  H   T  ++ +GLIKA      IGI +   G+     + 
Sbjct: 210 GYLVSVYRLNFNSYEYIQSTIHH-LTSTDVISGLIKAIVFGMIIGITSCFHGYYSDKGAK 268

Query: 341 SLGKKVTTCVVQSISIVIIIDS 362
            +G   T  VV S SI+I++ +
Sbjct: 269 GVGIATTYGVVHS-SILILLSN 289


>gi|58584874|ref|YP_198447.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Wolbachia endosymbiont
           strain TRS of Brugia malayi]
 gi|58419190|gb|AAW71205.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Wolbachia endosymbiont
           strain TRS of Brugia malayi]
          Length = 260

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 109/209 (52%), Gaps = 1/209 (0%)

Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211
           +L ++ +Q+  +G   +P+V L     GAVI  Q +        E     L+++  ++E+
Sbjct: 43  YLGNIAKQIIEIGFFSLPIVGLTGIFIGAVIVLQSSLSGPLISPEQIIPKLVTVTIIKEL 102

Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271
           G +L ++++ G+ GS+I AEIG+M+I E+IDA+ T+ ++  + LI+PRI A +I  P+ T
Sbjct: 103 GPVLISLIMVGKVGSSIAAEIGTMRITEQIDALTTLNINPFKYLIAPRILASVIVFPIFT 162

Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
           I A+   I G  I     ++    ++         + N  TGLIKA      I + +   
Sbjct: 163 ICADLIGIFGGYITAVFKFNHNLNIYIKYTTQFFNMYNFITGLIKATAFGAIISVSSCYY 222

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIII 360
           G+     +  +    T+ VV S SI+II+
Sbjct: 223 GYHCQEGARGVSIATTSTVVLS-SILIIL 250


>gi|293602880|ref|ZP_06685319.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292818674|gb|EFF77716.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 262

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 116/214 (54%), Gaps = 1/214 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q++++G   + ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA
Sbjct: 48  QQVHFIGNYSLLIIAVSGMFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTA 107

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+++ AEIG MK  E++ A+  M +D +R ++ PR+W  II++P+L  + +  
Sbjct: 108 LLFAGRAGTSLTAEIGLMKAGEQLSAMEMMAVDPIRRVLVPRLWGGIIAMPILAAVFSMV 167

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFAVG 336
            ++G  +V      +    F+S+  +   + N +  G+IK+      + +VA+ EG+   
Sbjct: 168 GVLGGWVVGVLMIGVDAGAFWSQMQNGVDVWNDVANGVIKSVVFGITVTLVALYEGWQAK 227

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                + +  T  VV     V+ +D L     F 
Sbjct: 228 PTPEGVARATTRTVVVGSLAVLGLDFLLTALMFG 261


>gi|89054229|ref|YP_509680.1| hypothetical protein Jann_1738 [Jannaschia sp. CCS1]
 gi|88863778|gb|ABD54655.1| protein of unknown function DUF140 [Jannaschia sp. CCS1]
          Length = 260

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 1/202 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           RQ   +G   +PVV L +F TG  +A Q     ++F AE     +++I   RE+G +L  
Sbjct: 47  RQFLTIGWLSLPVVGLTAFFTGGALALQIYAGGARFNAEAVVPQIVAISIARELGPVLGG 106

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +M+AGR  +AI AEI +MK+ E+IDA+RT+    ++ L +PR+ A  +SLP+L  + +  
Sbjct: 107 LMVAGRVAAAIAAEIATMKVTEQIDALRTLSTHPMKYLTAPRLIAATLSLPVLVAVGDSI 166

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            I G  +V     D   A + S      T+ ++ +GL+K       + ++    G   G 
Sbjct: 167 GIFGGYLVSTSRLDFNPAAYLSNTRDFLTIRDVTSGLVKGAVFGFIVALMGCYHGMNSGR 226

Query: 338 HSNSLGKKVTTCVVQSISIVII 359
            +  +G+  T  VV S SI+I+
Sbjct: 227 GARGVGRATTQAVV-SASILIL 247


>gi|221069030|ref|ZP_03545135.1| protein of unknown function DUF140 [Comamonas testosteroni KF-1]
 gi|220714053|gb|EED69421.1| protein of unknown function DUF140 [Comamonas testosteroni KF-1]
          Length = 258

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 118/215 (54%), Gaps = 3/215 (1%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG-AEIFSIDLMSILQLREIGVLLTA 217
           Q++++G   + ++ +     G V+  QG + L ++G AE   + ++++  LRE+G ++TA
Sbjct: 45  QIHFLGNYSLAIIGVSGLFVGFVLGLQGYYILQRYGSAEALGM-MVALSLLRELGPVVTA 103

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+A+ AEIG MK  E++ A+  M +D V+ +++PR WA +I++PLL  + +  
Sbjct: 104 LLFAGRAGTALTAEIGLMKAGEQLSAMEMMAVDPVKRILAPRFWAGLITMPLLAAVFSAV 163

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            ++G  +V      +    F+ +        +++  G++K+     A+  VA+ +G+A  
Sbjct: 164 GVLGGWLVGVVMIGVDSGAFWGQMQQGVDWWSDLGNGVLKSFVFGLAVTFVALLQGYAAK 223

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
                + +  T  VV +   V+ +D L     F+I
Sbjct: 224 PTPEGVSRATTRTVVVASLAVLGLDFLLTATMFSI 258


>gi|88811866|ref|ZP_01127119.1| hypothetical protein NB231_05736 [Nitrococcus mobilis Nb-231]
 gi|88790750|gb|EAR21864.1| hypothetical protein NB231_05736 [Nitrococcus mobilis Nb-231]
          Length = 258

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 110/216 (50%), Gaps = 3/216 (1%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           +I Q+Y  GV  + ++++     G V+  QG   L  FGAE  S+ ++  L L RE+G +
Sbjct: 43  VITQIYATGVLSLLIIVVSGLFVGMVLGLQGYNTLVNFGAEQ-SLGVLVALSLTRELGPV 101

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           ++A++ +GR+GSA+ AEIG MK  E++  +  M +D  R +++PR+   +I+LPLL  + 
Sbjct: 102 VSALLFSGRAGSALTAEIGLMKATEQLSGMEMMAVDPERRVVAPRLLGGMIALPLLAAIF 161

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGF 333
               + G   V      +    ++S+  +  +   ++  G+IK+      +   A+ EGF
Sbjct: 162 TLVGVFGGYFVGTVLLGVDSGAYWSQMQAQVSFTDDVVNGVIKSLVFGFVVSWTAVFEGF 221

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
                S  + +  T  VV S   V+ +D +     F
Sbjct: 222 DCAPTSEGVSRATTRAVVHSSLAVLGLDFILTALMF 257


>gi|149925791|ref|ZP_01914055.1| ABC-type transporter, permease component involved in toluene
           tolerance [Limnobacter sp. MED105]
 gi|149825908|gb|EDM85116.1| ABC-type transporter, permease component involved in toluene
           tolerance [Limnobacter sp. MED105]
          Length = 261

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 119/217 (54%), Gaps = 1/217 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +I Q++++G   + ++++     G V+  QG + L+++GAE     L+++  +RE+G ++
Sbjct: 45  VIDQIHFIGNYSLVIIVVSGLFVGFVLGLQGYYTLNRYGAEQALGLLVALSLVRELGPVV 104

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           +A++ AGR+G+++ AEIG MK  E++ A+  M +D    +++PR  A +ISLPLL  L +
Sbjct: 105 SALLFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVDPKARIVAPRWIAGLISLPLLAGLFS 164

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
              I G  +V      +    F+S+  +   +  +I  G+IK+     A+  +A+ +G+A
Sbjct: 165 AVGIFGGYVVGVLLIGVDSGAFWSQMQAGVDVRDDILNGVIKSVVFGVAVSSIALFQGYA 224

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
                  + +  T  VV S   ++ +D +     F+I
Sbjct: 225 CQPTPEGVSRATTRTVVISSLTILGLDFVLTALMFSI 261


>gi|302828760|ref|XP_002945947.1| hypothetical protein VOLCADRAFT_72591 [Volvox carteri f.
           nagariensis]
 gi|300268762|gb|EFJ52942.1| hypothetical protein VOLCADRAFT_72591 [Volvox carteri f.
           nagariensis]
          Length = 348

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 114/214 (53%), Gaps = 2/214 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + Q+  VG + + V +L +   G V   Q   + ++ G       ++++   RE+  ++T
Sbjct: 125 VEQLRLVGPASLGVSLLTAGFVGMVFTIQFVREFAKLGLTRSVGGVLALALSRELTPVVT 184

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A+++AGR GSA  AE+G+M+++E++D++R +  D V  L++PR+ A +I+ P+L +L  F
Sbjct: 185 AIILAGRVGSAFAAELGTMQVSEQMDSLRVLFTDPVDYLVTPRVLASMIAGPILNVLC-F 243

Query: 277 SAIIGASIVIWKY-YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              +GA++++    Y++P  V         T  ++ T ++K+      +  ++   GF  
Sbjct: 244 CMGMGAAVLLADLVYNVPANVIVDSARRALTSYDVLTSMVKSWVFGTVVATISCAWGFTT 303

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              +  +G+  T+ VV S+  + I D   +  +F
Sbjct: 304 SGGAKGVGESTTSAVVISLVTIFIADFFLSFIFF 337


>gi|116747850|ref|YP_844537.1| hypothetical protein Sfum_0402 [Syntrophobacter fumaroxidans MPOB]
 gi|116696914|gb|ABK16102.1| protein of unknown function DUF140 [Syntrophobacter fumaroxidans
           MPOB]
          Length = 258

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 107/205 (52%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + Q+ ++G   + ++ + +  TG V+A +    L     E     L+++  +RE+G +L+
Sbjct: 46  LEQIVFIGAKSLIIIFVTALSTGMVLALEALHMLRGGATENILGALVALSIVRELGPVLS 105

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A+++ GR+GSA+ AEIG M++ E+IDA+  M ++ ++ +++P+I A ++S+P+L    + 
Sbjct: 106 ALIVTGRAGSAMTAEIGIMRLTEQIDALEMMAVNPIKHVVTPKIVAGVVSMPVLCAFFDV 165

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
             I+G   V    Y +P   FF          ++  GL K+     A+  +    G+   
Sbjct: 166 VGILGGYFVGVVIYGVPEVHFFGGMTKAVAYLDVAGGLFKSAVFGLAMSWICSMMGYGAA 225

Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361
             +  + +  T  VV +   V+++D
Sbjct: 226 ATAEGVSRATTNAVVITSIAVLVLD 250


>gi|113954700|ref|YP_731394.1| transporter membrane component [Synechococcus sp. CC9311]
 gi|113882051|gb|ABI47009.1| possible transporter, membrane component [Synechococcus sp. CC9311]
          Length = 248

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 111/231 (48%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G+  +++ K +   + L  Q+   G     +VI+ +   G V   Q   +L+  GA    
Sbjct: 18  GQAVSATTKGRINTIDLFDQLQEAGPGSFLIVIITALAAGTVFNIQITAELNSMGAGSTV 77

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
             +++I   REI  LLTA ++ G+  +A  A++G+MK+ E+IDAI  +  D V  L+ PR
Sbjct: 78  GGVLAIGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTDPVEYLVVPR 137

Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319
           + A+++  P+  +L    AI  A I     Y IP AVF++   +  T  ++   LIKA  
Sbjct: 138 LIAMVVMAPVQCLLFFGVAIWSAQISSTNLYSIPPAVFWTAVRTWLTPDDLPFMLIKALV 197

Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               IG++A   G      +  +G   T  VV  +  V ++D L     F 
Sbjct: 198 FGLQIGVIACGWGMTTKGGAKEVGTSTTGAVVMILVSVALMDVLLTQILFG 248


>gi|15223672|ref|NP_173410.1| TGD1 (TRIGALACTOSYLDIACYLGLYCEROL 1); lipid transporter
           [Arabidopsis thaliana]
 gi|42571555|ref|NP_973868.1| TGD1 (TRIGALACTOSYLDIACYLGLYCEROL 1); lipid transporter
           [Arabidopsis thaliana]
 gi|42571557|ref|NP_973869.1| TGD1 (TRIGALACTOSYLDIACYLGLYCEROL 1); lipid transporter
           [Arabidopsis thaliana]
 gi|75153743|sp|Q8L4R0|TGD1_ARATH RecName: Full=Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic;
           AltName: Full=ABC transporter I family member 14;
           Short=ABC transporter ABCI.14; Short=AtABCI14; Flags:
           Precursor
 gi|20465620|gb|AAM20141.1| unknown protein [Arabidopsis thaliana]
 gi|21281062|gb|AAM45069.1| unknown protein [Arabidopsis thaliana]
 gi|45680900|gb|AAS75319.1| permease-like protein [Arabidopsis thaliana]
 gi|222424205|dbj|BAH20061.1| AT1G19800 [Arabidopsis thaliana]
 gi|332191778|gb|AEE29899.1| trigalactosyldiacylglycerol 1 [Arabidopsis thaliana]
 gi|332191779|gb|AEE29900.1| trigalactosyldiacylglycerol 1 [Arabidopsis thaliana]
 gi|332191780|gb|AEE29901.1| trigalactosyldiacylglycerol 1 [Arabidopsis thaliana]
          Length = 350

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 108/213 (50%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           ++Q+   G   + V +L S   G     Q   + ++ G       ++++   RE+  ++T
Sbjct: 127 LQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFTRLGLNRSIGGVLALAFSRELSPVIT 186

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           ++++AGR GSA  AE+G+M+++E+ D +R +G D +  LI+PR+ A  ++LP LT++   
Sbjct: 187 SIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADPIDYLITPRVIASCLALPFLTLMCFT 246

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
             +  ++++    Y I   +     H      +I + +IK+      I +++   G    
Sbjct: 247 VGMASSALLSDAVYGISINIIMDSAHRALRPWDIVSAMIKSQVFGAIISVISCSWGVTTT 306

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
             +  +G+  T+ VV S+  + I D + + F+F
Sbjct: 307 GGAKGVGESTTSAVVMSLVGIFIADFVLSSFFF 339


>gi|330444642|ref|YP_004377628.1| ABC transporter permease [Chlamydophila pecorum E58]
 gi|328807752|gb|AEB41925.1| ABC transporter, permease protein [Chlamydophila pecorum E58]
          Length = 271

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 89/150 (59%), Gaps = 3/150 (2%)

Query: 146 SYKFKGFLL-SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204
           S+ FK  L  ++  Q Y +GVS +PVVIL   +TG V+A Q  +QL  +G    +I    
Sbjct: 44  SFSFKKCLFHAVCVQGYAIGVSSLPVVILTGVITGVVLALQSYYQLGVYGLSC-AIGFFV 102

Query: 205 ILQ-LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263
           +   L EIG +LTA+ ++GR G AI A +G++++ E+I A+ ++G++ +     PRI A 
Sbjct: 103 VKSILVEIGPVLTALALSGRVGGAIAAFLGTLRMTEQISAMSSLGVNPLEYFALPRIIAG 162

Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIP 293
           II++P L I+A +S I    ++    + IP
Sbjct: 163 IITMPALVIIAVWSGIFSGYMICRYAFQIP 192


>gi|325927586|ref|ZP_08188818.1| putative integral membrane protein [Xanthomonas perforans 91-118]
 gi|325542051|gb|EGD13561.1| putative integral membrane protein [Xanthomonas perforans 91-118]
          Length = 249

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 75/126 (59%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
           S   + F+  L+R++Y VG   +P++ +     G V+  QG   L+ +GA      L+ +
Sbjct: 24  SLPTRDFMAELVREIYKVGARSLPIIAVGGAFVGLVLTLQGYRTLTTYGASDALSTLLGL 83

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
              RE+  +LTA++  GR+GS+I AE+G M+  ++I A+  M +D V   ++PR WA ++
Sbjct: 84  SLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKALELMAIDPVAKAVAPRFWAAVL 143

Query: 266 SLPLLT 271
           ++PLLT
Sbjct: 144 TVPLLT 149


>gi|189184336|ref|YP_001938121.1| toluene export ABC transporter permease protein [Orientia
           tsutsugamushi str. Ikeda]
 gi|189181107|dbj|BAG40887.1| toluene export ABC transporter permease protein [Orientia
           tsutsugamushi str. Ikeda]
          Length = 288

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 114/202 (56%), Gaps = 5/202 (2%)

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTAVMIA 221
           +G   +P+V   S  +GAV+A Q  ++     + I +I ++ +  + RE+G ++  +++A
Sbjct: 78  IGFYSLPIVAATSLCSGAVLALQ-TYEGVVRSSAIHAIPMIIVTSITRELGPVIVGLIVA 136

Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281
           GR G+++VAEIG+M++ E+IDA+ T+  D ++ L++PR+ A  +SLP L + ++   + G
Sbjct: 137 GRIGASMVAEIGTMRVTEQIDALFTLATDPIKYLVTPRLVATTLSLPFLVLTSDVIGVFG 196

Query: 282 ASIV-IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
             +V +++     +    S  H   T  ++ +GLIKA      IGI +   G+     + 
Sbjct: 197 GYLVSVYRLNFNSYEYIQSTIHH-LTSNDVISGLIKAIVFGMIIGITSCFHGYYSDKGAK 255

Query: 341 SLGKKVTTCVVQSISIVIIIDS 362
            +G   T  VV S SI+I++ +
Sbjct: 256 GVGIATTYGVVHS-SILILLSN 276


>gi|62185216|ref|YP_220001.1| putative permease component of ABC transporter [Chlamydophila
           abortus S26/3]
 gi|62148283|emb|CAH64049.1| putative permease component of ABC transporter [Chlamydophila
           abortus S26/3]
          Length = 261

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 109/215 (50%), Gaps = 2/215 (0%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ-LREIGVLLTA 217
           Q Y +GV+ +PVVIL   VTG V+A Q  +QL   G    +I    +   L EIG +LTA
Sbjct: 47  QGYDIGVASLPVVILTGAVTGIVLALQSCYQLGIHGLSC-AIGFFVVKSILVEIGPVLTA 105

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           + ++GR G AI A +G+M++ E++ A+ T+G++ +     PRI A  I++P L I A +S
Sbjct: 106 LALSGRVGGAISAFLGTMRMTEQVSAMETLGVNPLAYFALPRIIAGTIAMPALVIAAVWS 165

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            I G  ++    + +P  V+         +++I   ++K+      I  +A  +G     
Sbjct: 166 GIFGGYLLCRYAFQLPAQVYLHMVSGNVFISDIVMVIVKSLVFGFIITSLACYQGLGKHC 225

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
               + K  T  VV S   ++  + +   F+  +G
Sbjct: 226 RITDVAKVTTAGVVTSYISILFANCVITAFFHVLG 260


>gi|190576453|ref|YP_001974298.1| putative transmembrane component of ABC transporter protein
           [Stenotrophomonas maltophilia K279a]
 gi|254522804|ref|ZP_05134859.1| toluene tolerance protein [Stenotrophomonas sp. SKA14]
 gi|190014375|emb|CAQ48023.1| putative transmembrane component of ABC transporter protein
           [Stenotrophomonas maltophilia K279a]
 gi|219720395|gb|EED38920.1| toluene tolerance protein [Stenotrophomonas sp. SKA14]
          Length = 249

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 74/126 (58%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
           S   + FL  L R++Y +G   +P++ +     G V+  QG   L+ FGA      L+ +
Sbjct: 24  SLPTRDFLAELTREIYKIGARSLPIIAVGGAFVGLVLTLQGYRTLTTFGAADALSTLLGL 83

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
              RE+  +LTA++  GR+GS+I AE+G M+  ++I A+  M +D V   ++PR WA ++
Sbjct: 84  SLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKALELMAIDPVAKAVAPRFWAAVL 143

Query: 266 SLPLLT 271
           ++PLLT
Sbjct: 144 TVPLLT 149


>gi|126727195|ref|ZP_01743032.1| ABC transporter, inner membrane subunit [Rhodobacterales bacterium
           HTCC2150]
 gi|126703623|gb|EBA02719.1| ABC transporter, inner membrane subunit [Rhodobacterales bacterium
           HTCC2150]
          Length = 258

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 107/212 (50%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           + +  +G   +PVV L +  TG  +A Q     ++F AE     ++SI  +RE+G +L+ 
Sbjct: 45  QALLNIGFFSLPVVGLTALFTGGALALQIYAGGARFNAEAVVPSIVSIGMVRELGPVLSG 104

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +M+AGR  ++I AE+ SMK+ E+IDA+ T+  + ++ L  PR+ A  ++LP+L  + +  
Sbjct: 105 LMVAGRVSASIAAELASMKVTEQIDALVTLSSNPLKYLAVPRVLAATLTLPILVAVGDSI 164

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            I G  +V     D   A +     +   L ++ +GLIK       + I+    G   G 
Sbjct: 165 GIFGGYLVGVNSLDFNAAGYLKNTVTFLELWDVTSGLIKGAVFGFILSIMGCYHGMNSGR 224

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
            +  +G+     VV S  +++  + L    +F
Sbjct: 225 GAQGVGRATINAVVSSSILILAANYLLTSLFF 256


>gi|146328846|ref|YP_001209755.1| hypothetical protein DNO_0858 [Dichelobacter nodosus VCS1703A]
 gi|146232316|gb|ABQ13294.1| conserved hypothetical membrane protein [Dichelobacter nodosus
           VCS1703A]
          Length = 262

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 120/217 (55%), Gaps = 2/217 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I+ +++ GV  +P++++     G V+A Q    +S FGAE  +  L+++  +RE+G ++T
Sbjct: 46  IKALFHAGVLSLPIIMVSGLFVGMVLALQAFINMSLFGAEQSTSTLVALSLMRELGSVVT 105

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++ AGR+GSAI AEIG MK  E++DA+  MG++ +  +  PR +  +++LPLL I+   
Sbjct: 106 ALLFAGRAGSAITAEIGLMKTTEQLDAMTMMGVEPLAQIGVPRFFGALLALPLLAIIFVA 165

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFH-STATLANIFTGL-IKAPFMACAIGIVAMKEGFA 334
           +A++GA  V   +  +   +F+S+         NI  G+ +K+         +++ +GF 
Sbjct: 166 TAMVGAYWVAVPHLGLDNGIFWSQLQRGVGFYQNIVLGIGVKSLVFGWLCAAISVFQGFV 225

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
               +  + +  T  VV S   V+ +D L     FA+
Sbjct: 226 CVPTAQGMAQATTKTVVLSSLAVLAVDFLLTSLMFAL 262


>gi|296114211|ref|ZP_06832866.1| ABC transporter permease protein [Gluconacetobacter hansenii ATCC
           23769]
 gi|295979287|gb|EFG86010.1| ABC transporter permease protein [Gluconacetobacter hansenii ATCC
           23769]
          Length = 261

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 117/221 (52%), Gaps = 9/221 (4%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           IG+ ++  +  +  Q  + GL+           + ++ F  SLI   Y+     +PVV L
Sbjct: 11  IGRTLLDMVRMA-GQVALFGLL--AVSHLVRPPFYWRTFCGSLIEIGYF----SLPVVAL 63

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
            +  +G VIA Q     +Q+ A+     ++ +   RE+G +L  +M+AGR G+A+ AEIG
Sbjct: 64  TALFSGGVIALQSYTGFAQYHAQSAIAGIVILAVTRELGPVLAGLMVAGRVGAAMSAEIG 123

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV-IWKYYDI 292
           +M++  +IDA+ T+  + ++ L++PR+ A  ++LP L I+A+   ++G  IV + K   +
Sbjct: 124 TMRVTNQIDALSTLSTNPIKYLVTPRLLAGTLALPFLVIIADILGVMGGFIVCVMKLNFV 183

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
           P A + S   ++  + ++  GL KA      I ++    G+
Sbjct: 184 PQA-YISATIASFRMMDVTVGLAKAAIFGFLIALMGCYHGY 223


>gi|194367789|ref|YP_002030399.1| hypothetical protein Smal_4017 [Stenotrophomonas maltophilia
           R551-3]
 gi|194350593|gb|ACF53716.1| protein of unknown function DUF140 [Stenotrophomonas maltophilia
           R551-3]
          Length = 249

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 74/126 (58%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
           S   + FL  L R++Y +G   +P++ +     G V+  QG   L+ FGA      L+ +
Sbjct: 24  SLPTRDFLAELTREIYKIGARSLPIIAVGGAFVGLVLTLQGYRTLTTFGAADALSTLLGL 83

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
              RE+  +LTA++  GR+GS+I AE+G M+  ++I A+  M +D V   ++PR WA ++
Sbjct: 84  SLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKALELMAIDPVAKAVAPRFWAAVL 143

Query: 266 SLPLLT 271
           ++PLLT
Sbjct: 144 TVPLLT 149


>gi|297844946|ref|XP_002890354.1| hypothetical protein ARALYDRAFT_472206 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336196|gb|EFH66613.1| hypothetical protein ARALYDRAFT_472206 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 350

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 108/213 (50%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           ++Q+   G   + V +L S   G     Q   + ++ G       ++++   RE+  ++T
Sbjct: 127 LQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFTRLGLNRSIGGVLALAFSRELSPVIT 186

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           ++++AGR GSA  AE+G+M+++E+ D +R +G D +  LI+PR+ A  ++LP LT++   
Sbjct: 187 SIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADPIDYLITPRVIASCLALPFLTLMCFT 246

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
             +  ++++    Y I   +     H      +I + +IK+      I +++   G    
Sbjct: 247 VGMASSALLSDAVYGISINIIMDSAHRALRPWDIVSAMIKSQVFGAIISVISCSWGVTTT 306

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
             +  +G+  T+ VV S+  + I D + + F+F
Sbjct: 307 GGAKGVGESTTSAVVMSLVGIFIADFVLSSFFF 339


>gi|78050007|ref|YP_366182.1| ABC transporter permease [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78038437|emb|CAJ26182.1| ABC transporter permease [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 249

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 75/126 (59%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
           S   + F+  L+R++Y VG   +P++ +     G V+  QG   L+ +GA      L+ +
Sbjct: 24  SLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTLQGYRTLTTYGASDALSTLLGL 83

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
              RE+  +LTA++  GR+GS+I AE+G M+  ++I A+  M +D V   ++PR WA ++
Sbjct: 84  SLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKALELMAIDPVAKAVAPRFWAAVL 143

Query: 266 SLPLLT 271
           ++PLLT
Sbjct: 144 TVPLLT 149


>gi|21245052|ref|NP_644634.1| toluene tolerance protein [Xanthomonas axonopodis pv. citri str.
           306]
 gi|294627465|ref|ZP_06706049.1| toluene tolerance protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|294664971|ref|ZP_06730282.1| toluene tolerance protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|21110783|gb|AAM39170.1| toluene tolerance protein [Xanthomonas axonopodis pv. citri str.
           306]
 gi|292598286|gb|EFF42439.1| toluene tolerance protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292605249|gb|EFF48589.1| toluene tolerance protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 249

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 75/126 (59%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
           S   + F+  L+R++Y VG   +P++ +     G V+  QG   L+ +GA      L+ +
Sbjct: 24  SLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTLQGYRTLTTYGASDALSTLLGL 83

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
              RE+  +LTA++  GR+GS+I AE+G M+  ++I A+  M +D V   ++PR WA ++
Sbjct: 84  SLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKALELMAIDPVAKAVAPRFWAAVL 143

Query: 266 SLPLLT 271
           ++PLLT
Sbjct: 144 TVPLLT 149


>gi|325915573|ref|ZP_08177883.1| hypothetical integral membrane protein [Xanthomonas vesicatoria
           ATCC 35937]
 gi|325538211|gb|EGD09897.1| hypothetical integral membrane protein [Xanthomonas vesicatoria
           ATCC 35937]
          Length = 249

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 75/126 (59%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
           S   + F+  L+R++Y VG   +P++ +     G V+  QG   L+ +GA      L+ +
Sbjct: 24  SLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTLQGYRTLTTYGASDALSTLLGL 83

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
              RE+  +LTA++  GR+GS+I AE+G M+  ++I A+  M +D V   ++PR WA ++
Sbjct: 84  SLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKALELMAIDPVAKAVAPRFWAAVL 143

Query: 266 SLPLLT 271
           ++PLLT
Sbjct: 144 TVPLLT 149


>gi|188579086|ref|YP_001916015.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188523538|gb|ACD61483.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 249

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 98/189 (51%), Gaps = 1/189 (0%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
           S   + F+  L+R++Y VG   +P++ +     G V+  QG   L+ +GA      L+ +
Sbjct: 24  SLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTLQGYRTLTTYGASDALSTLLGL 83

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
              RE+  +LTA++  GR+GS+I AE+G M+  ++I A+  M +D V   ++PR WA ++
Sbjct: 84  SLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKALELMAIDPVAKAVAPRFWAAVL 143

Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF-TGLIKAPFMACAI 324
           ++PLLT +    AI G  +       I    F+S   ++  + + F   ++K+       
Sbjct: 144 TVPLLTGVFCSLAITGGYVEAVHVLGIDNGTFWSGLSNSVDVWDDFGVAMLKSAIFGGTT 203

Query: 325 GIVAMKEGF 333
            +VA   GF
Sbjct: 204 ALVAAYVGF 212


>gi|282899746|ref|ZP_06307709.1| protein of unknown function DUF140 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195361|gb|EFA70295.1| protein of unknown function DUF140 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 264

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 111/208 (53%), Gaps = 1/208 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + Q+  VG   + + +L +   GAV   Q A +   FGA      ++++   RE+  +LT
Sbjct: 42  LEQLAVVGPDSLFIALLTAIFVGAVFTIQVAREFINFGAGNLVGGVLAVALTRELSPVLT 101

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV++AGR GSA  AEIG+M++ E+IDA+  +  D +  L+ PR+ A ++ LP+LT+L+  
Sbjct: 102 AVILAGRVGSAFAAEIGTMRVTEQIDALLMLKTDPIDFLVIPRLLACLLMLPILTLLSLV 161

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           + + G  I+    Y++   VF     +   L +I + +IKA      I I+    G    
Sbjct: 162 TGMWGGLIIATNLYNLSDTVFLDSARNFLDLRDITSAMIKAACFGILIAIIGCSWGLTTT 221

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             +  +G+  TT VV ++ +VI I + F
Sbjct: 222 GGAKGVGQSTTTAVVTAL-LVIFISNFF 248


>gi|166710003|ref|ZP_02241210.1| ABC transporter permease [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 249

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 75/126 (59%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
           S   + F+  L+R++Y VG   +P++ +     G V+  QG   L+ +GA      L+ +
Sbjct: 24  SLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTLQGYRTLTTYGASDALSTLLGL 83

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
              RE+  +LTA++  GR+GS+I AE+G M+  ++I A+  M +D V   ++PR WA ++
Sbjct: 84  SLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKALELMAIDPVAKAVAPRFWAAVL 143

Query: 266 SLPLLT 271
           ++PLLT
Sbjct: 144 TVPLLT 149


>gi|188993823|ref|YP_001905833.1| putative transporter [Xanthomonas campestris pv. campestris str.
           B100]
 gi|167735583|emb|CAP53801.1| putative transporter [Xanthomonas campestris pv. campestris]
          Length = 249

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 75/126 (59%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
           S   + F+  L+R++Y VG   +P++ +     G V+  QG   L+ +GA      L+ +
Sbjct: 24  SLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTLQGYRTLTTYGASDALSTLLGL 83

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
              RE+  +LTA++  GR+GS+I AE+G M+  ++I A+  M +D V   ++PR WA ++
Sbjct: 84  SLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKALELMAIDPVAKAVAPRFWAAVL 143

Query: 266 SLPLLT 271
           ++PLLT
Sbjct: 144 TVPLLT 149


>gi|319788633|ref|YP_004148108.1| hypothetical protein Psesu_3054 [Pseudoxanthomonas suwonensis 11-1]
 gi|317467145|gb|ADV28877.1| protein of unknown function DUF140 [Pseudoxanthomonas suwonensis
           11-1]
          Length = 249

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 74/127 (58%)

Query: 145 SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204
           +S   + FL  L R+ Y +G   +P++ +     G V+  QG   L+ FGA      L+ 
Sbjct: 23  ASLPSRDFLAELARETYKIGGRSLPIIAVGGAFVGLVLTLQGYRTLTTFGAADALSTLLG 82

Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264
           +   RE+G +LTA++  GR+GS+I AE+G M+  ++I A+  M +D V   ++PR WA +
Sbjct: 83  LSLYRELGPVLTALLFIGRAGSSIAAELGLMRATDQIKALELMAIDPVAKAVAPRFWAAV 142

Query: 265 ISLPLLT 271
           + +PLLT
Sbjct: 143 LCVPLLT 149


>gi|289662322|ref|ZP_06483903.1| toluene tolerance protein [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 249

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 75/126 (59%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
           S   + F+  L+R++Y VG   +P++ +     G V+  QG   L+ +GA      L+ +
Sbjct: 24  SLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTLQGYRTLTTYGASDALSTLLGL 83

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
              RE+  +LTA++  GR+GS+I AE+G M+  ++I A+  M +D V   ++PR WA ++
Sbjct: 84  SLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKALELMAIDPVAKAVAPRFWAAVL 143

Query: 266 SLPLLT 271
           ++PLLT
Sbjct: 144 TVPLLT 149


>gi|29840386|ref|NP_829492.1| ABC transporter, permease protein, putative [Chlamydophila caviae
           GPIC]
 gi|29834735|gb|AAP05370.1| ABC transporter, permease protein, putative [Chlamydophila caviae
           GPIC]
          Length = 263

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 116/230 (50%), Gaps = 3/230 (1%)

Query: 144 ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203
           + S+K K    S+  Q Y +GV+ +PVV+L   VTG V+A Q  +QL   G    +I   
Sbjct: 35  SCSWK-KSLFRSVSLQGYDIGVASLPVVMLTGAVTGIVLALQSYYQLGIHGLSC-AIGFF 92

Query: 204 SILQ-LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
            +   L EIG +LTA+ ++GR G AI A +G+M++ E++ A+ T+G++ +     PRI A
Sbjct: 93  VVKSILVEIGPVLTALALSGRVGGAISAFLGTMRMTEQVSAMETLGVNPLEYFALPRIIA 152

Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322
            II++P L I A +S I    ++    + +P  V+         L++I   ++K+     
Sbjct: 153 GIIAMPALVIAAVWSGIFCGYLLCRYAFQLPAQVYLHMVSGNVLLSDIVMVIVKSLVFGF 212

Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
            I  +A  +G         + K  T  VV S   ++  + +   F+  +G
Sbjct: 213 IITSLACYQGLGKHCRITDVAKVTTAGVVTSYISILFANCVITSFFHVLG 262


>gi|269128543|ref|YP_003301913.1| hypothetical protein Tcur_4348 [Thermomonospora curvata DSM 43183]
 gi|268313501|gb|ACY99875.1| protein of unknown function DUF140 [Thermomonospora curvata DSM
           43183]
          Length = 285

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 122/249 (48%), Gaps = 9/249 (3%)

Query: 131 ILGLVISNTGEF---CASSYK--FKGFL--LSLIRQMYY-VGVSGVPVVILISFVTGAVI 182
           +L + +   G F   C  +++  FK  L     I Q ++ V V+ +P  +L++   GA++
Sbjct: 32  LLNITVKEPGRFFALCLDAFRAMFKRPLQWREFIEQAWFIVSVTAIPT-MLVAIPFGAIL 90

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           + Q    + Q GA+ F+     +  +RE   L+TA++IAG +GSA+ A+IGS KI EEID
Sbjct: 91  SLQVGGLIRQLGAQSFTGATAVVAIVREASPLVTALLIAGAAGSAMCADIGSRKIREEID 150

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +G++ +  L+ PR+WA       L  L +   ++G         D     + + F+
Sbjct: 151 AMEVLGINPLHRLVVPRMWACAFIGLFLNGLVSVVGLVGGYFFNVVLQDGTPGAYLASFN 210

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           + A L ++    +KA       G+VA  +G         +G  V   VV +  ++ + + 
Sbjct: 211 AMAQLPDLIQAEVKAFIFGLTAGLVAAYKGLNAKGGPKGVGDAVNQTVVITFMLLFVENF 270

Query: 363 LFAIFYFAI 371
           + +  YF +
Sbjct: 271 VISALYFQL 279


>gi|319761579|ref|YP_004125516.1| hypothetical protein Alide_0863 [Alicycliphilus denitrificans BC]
 gi|330823447|ref|YP_004386750.1| hypothetical protein Alide2_0819 [Alicycliphilus denitrificans
           K601]
 gi|317116140|gb|ADU98628.1| protein of unknown function DUF140 [Alicycliphilus denitrificans
           BC]
 gi|329308819|gb|AEB83234.1| protein of unknown function DUF140 [Alicycliphilus denitrificans
           K601]
          Length = 260

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 133/262 (50%), Gaps = 12/262 (4%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR-QMYYVGVSGVPVV 171
           H+G  +   + D    A    L +   G F  +  +F      L+R Q++++G   + ++
Sbjct: 8   HVGYAVRSKLADLGMGAR---LFVRLVGLFGTAMRRF-----GLVRDQVHFLGNYSLSII 59

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTAVMIAGRSGSAIVA 230
            +     G V+A QG   L  +G+   S+ L+  L L RE+G ++TA++ AGR+G+++ A
Sbjct: 60  AMSGLFVGFVLALQGYNVLQLYGSA-NSLGLVVTLGLVRELGPVVTALLFAGRAGTSLTA 118

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           EIG M+  E++ A+  M +D V+ +++PR W  +I++PLL  + +   +IG  +V     
Sbjct: 119 EIGLMRAGEQLSAMEMMAVDPVQRILAPRFWGGVIAMPLLAAVFSAVGVIGGWLVGVVLI 178

Query: 291 DIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            +    F+ +  S+  +  ++  G++K+     A+  +A+ +G+        + +  T  
Sbjct: 179 GVDGGAFWGQMQSSVDVWKDVGNGVVKSVVFGVAVTFIAVLQGYMAKPTPEGVSRATTRT 238

Query: 350 VVQSISIVIIIDSLFAIFYFAI 371
           VV +   V+ +D +     F+I
Sbjct: 239 VVMASLTVLGLDFVLTALMFSI 260


>gi|58579932|ref|YP_198948.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84621937|ref|YP_449309.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|58424526|gb|AAW73563.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84365877|dbj|BAE67035.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 249

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 75/126 (59%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
           S   + F+  L+R++Y VG   +P++ +     G V+  QG   L+ +GA      L+ +
Sbjct: 24  SLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTLQGYRTLTTYGASDALSTLLGL 83

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
              RE+  +LTA++  GR+GS+I AE+G M+  ++I A+  M +D V   ++PR WA ++
Sbjct: 84  SLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKALELMAIDPVAKAVAPRFWAAVL 143

Query: 266 SLPLLT 271
           ++PLLT
Sbjct: 144 TVPLLT 149


>gi|289667685|ref|ZP_06488760.1| toluene tolerance protein [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 249

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 75/126 (59%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
           S   + F+  L+R++Y VG   +P++ +     G V+  QG   L+ +GA      L+ +
Sbjct: 24  SLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTLQGYRTLTTYGASDALSTLLGL 83

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
              RE+  +LTA++  GR+GS+I AE+G M+  ++I A+  M +D V   ++PR WA ++
Sbjct: 84  SLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKALELMAIDPVAKAVAPRFWAAVL 143

Query: 266 SLPLLT 271
           ++PLLT
Sbjct: 144 TVPLLT 149


>gi|268317890|ref|YP_003291609.1| hypothetical protein Rmar_2342 [Rhodothermus marinus DSM 4252]
 gi|262335424|gb|ACY49221.1| protein of unknown function DUF140 [Rhodothermus marinus DSM 4252]
          Length = 253

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 87/139 (62%), Gaps = 1/139 (0%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSIL 206
           +FK +  +L  QM  +G+  +P+V + +  +GAV+  Q A+QL S F  +     +++  
Sbjct: 31  EFKTYRKNLFDQMVRIGIDSIPIVSMAAAFSGAVMTVQTAYQLVSPFIPKTVIGAVVAPS 90

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            + E+ V++T  ++AGR G+ I AE+G+M++ E+IDA+  MGL+ V  L+ PR+ A ++ 
Sbjct: 91  MILELAVVVTGFILAGRVGARIAAELGTMRVTEQIDALEAMGLNSVSYLVVPRVVAGMVM 150

Query: 267 LPLLTILANFSAIIGASIV 285
           LP+L ++A F  I+   +V
Sbjct: 151 LPVLYVVACFVGIVSGILV 169


>gi|121609355|ref|YP_997162.1| hypothetical protein Veis_2398 [Verminephrobacter eiseniae EF01-2]
 gi|121553995|gb|ABM58144.1| protein of unknown function DUF140 [Verminephrobacter eiseniae
           EF01-2]
          Length = 260

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 120/218 (55%), Gaps = 2/218 (0%)

Query: 155 SLIR-QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
           +L+R Q++++G   + ++++     G V+  QG + L ++GA      L+++  +RE+G 
Sbjct: 42  ALVRDQLHFLGNYSLAIIVVSGLFVGFVLGLQGYYTLQRYGASEALGLLVALSLVRELGP 101

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           ++TA++ AGR+G+++ AEIG M+  E++ A+  M +D VR +++PR WA +I++PLL  +
Sbjct: 102 VVTALLFAGRAGTSLTAEIGLMRSGEQLSAMEMMAIDPVRRILAPRFWAGVIAMPLLAAM 161

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
            +   +IG ++V      I    F+S+      +  ++  G++K+      +  VA+ +G
Sbjct: 162 FSAVGVIGGAVVGVLMIGIDPGAFWSQMQGGVDIWRDLGNGVLKSLVFGFTVSFVALLQG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +        + +  T  VV +   V+ +D +     F+
Sbjct: 222 YVARPTPEGVARATTRTVVLASLAVLALDFILTALMFS 259


>gi|10086491|gb|AAG12551.1|AC007797_11 Hypothetical Protein [Arabidopsis thaliana]
          Length = 283

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 108/213 (50%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           ++Q+   G   + V +L S   G     Q   + ++ G       ++++   RE+  ++T
Sbjct: 60  LQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFTRLGLNRSIGGVLALAFSRELSPVIT 119

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           ++++AGR GSA  AE+G+M+++E+ D +R +G D +  LI+PR+ A  ++LP LT++   
Sbjct: 120 SIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADPIDYLITPRVIASCLALPFLTLMCFT 179

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
             +  ++++    Y I   +     H      +I + +IK+      I +++   G    
Sbjct: 180 VGMASSALLSDAVYGISINIIMDSAHRALRPWDIVSAMIKSQVFGAIISVISCSWGVTTT 239

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
             +  +G+  T+ VV S+  + I D + + F+F
Sbjct: 240 GGAKGVGESTTSAVVMSLVGIFIADFVLSSFFF 272


>gi|78188458|ref|YP_378796.1| putative ABC transport system permease protein [Chlorobium
           chlorochromatii CaD3]
 gi|78170657|gb|ABB27753.1| putative ABC transport system permease protein [Chlorobium
           chlorochromatii CaD3]
          Length = 264

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 111/204 (54%), Gaps = 2/204 (0%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           Q    G   +P+V++ S   GA++A +    L  FGA+       ++  +RE+G LL  +
Sbjct: 51  QATICGTDSIPIVLVSSISIGALLAVEVGNLLEDFGAKTMLGRSTALSVIRELGPLLMGL 110

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR-IWALIISLPLLTILANFS 277
           M++ R GS   AE+G+M+I+E+IDA+R  G D V  L+ PR + AL++ LP LT L++F+
Sbjct: 111 MLSARFGSRNGAELGAMQISEQIDALRAFGTDPVAKLVMPRLVAALVMFLP-LTALSDFA 169

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            +  A+ +   Y+ I   +F++  +    L +   G +KAP  A  I +V+   GF    
Sbjct: 170 GLQSAAYMAEHYHHIDAGIFWNAVYPRLVLKDFVLGFLKAPVFAVIITLVSSFNGFNARG 229

Query: 338 HSNSLGKKVTTCVVQSISIVIIID 361
            +  +G+     +V S  +V+I +
Sbjct: 230 GTAGVGRATIKGIVVSSGLVLIAN 253


>gi|42525130|ref|NP_970510.1| ABC-type organic solvent resistance transport system, permease
           protein [Bdellovibrio bacteriovorus HD100]
 gi|39577341|emb|CAE81164.1| ABC-type organic solvent resistance transport system, permease
           protein [Bdellovibrio bacteriovorus HD100]
          Length = 239

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 87/157 (55%), Gaps = 1/157 (0%)

Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263
           ++L LRE+G ++TA++++ R G+   +E+GSM+I E++DA++ +G+D V  L+ PR  A 
Sbjct: 71  AVLILRELGAIVTALLLSSRVGAGYASEVGSMQITEQVDALKMLGIDPVNYLVVPRFLAC 130

Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323
           ++   ++T++AN + I  A  V   Y      +F +         ++   +IK       
Sbjct: 131 VLGAMMITVVANMACIFSAMAVSQFYLGYTPGMFLTSMQRFVDFKDLIFAMIKGACFGGV 190

Query: 324 IGIVAMKEGFAVGVHSNSLGKKVT-TCVVQSISIVII 359
           I +VA   GF     +  +G+  T T VV SI+I++I
Sbjct: 191 IPLVACYFGFRCQQGAEGVGRATTNTVVVSSIAIIVI 227


>gi|21233625|ref|NP_639542.1| toluene tolerance protein [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66770590|ref|YP_245352.1| toluene tolerance protein [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21115493|gb|AAM43424.1| toluene tolerance protein [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66575922|gb|AAY51332.1| toluene tolerance protein [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 249

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 75/126 (59%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
           S   + F+  L+R++Y VG   +P++ +     G V+  QG   L+ +GA      L+ +
Sbjct: 24  SLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTLQGYRTLTTYGASDALSTLLGL 83

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
              RE+  +LTA++  GR+GS+I AE+G M+  ++I A+  M +D +   ++PR WA ++
Sbjct: 84  SLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKALELMAIDPIAKAVAPRFWAAVL 143

Query: 266 SLPLLT 271
           ++PLLT
Sbjct: 144 TVPLLT 149


>gi|116073591|ref|ZP_01470853.1| possible transporter, membrane component [Synechococcus sp. RS9916]
 gi|116068896|gb|EAU74648.1| possible transporter, membrane component [Synechococcus sp. RS9916]
          Length = 248

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 111/231 (48%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G+  +++ + K   + L  Q+   G     +V++     G+V   Q A +LS  GA    
Sbjct: 18  GQAVSATARGKINTIDLFDQLMEAGPGSFLIVLITGVAAGSVFNIQVAAELSGMGAGSTV 77

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
             +++I   REI  LLTA ++ G+  +A  A++G+MK+ E+IDAI  +  D V  L+ PR
Sbjct: 78  GGVLAIGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTDPVEYLVVPR 137

Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319
           + A+++  P+  +L    AI    I   ++Y+IP AVF++   +     ++   LIKA  
Sbjct: 138 LIAMVVMAPVQCLLFFAVAIYSGQITSTEFYNIPPAVFWNSVRTWLQPDDLPFMLIKALV 197

Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               I ++A   G         +G   T  VV  +  V ++D L     F 
Sbjct: 198 FGLQIAVLACGWGLTTSGGPKEVGTSTTGSVVMILVTVALMDVLLTQILFG 248


>gi|187930306|ref|YP_001900793.1| hypothetical protein Rpic_3239 [Ralstonia pickettii 12J]
 gi|187727196|gb|ACD28361.1| protein of unknown function DUF140 [Ralstonia pickettii 12J]
          Length = 255

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 114/216 (52%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +I Q+ ++G     ++ +     G V+  QG   L+++G+E     L+++  +RE+G ++
Sbjct: 40  VIEQLRFIGNDSFIIIAVSGLFVGFVLGLQGYNTLNRYGSEQALGLLVALSLVRELGPVV 99

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+G+++ AEIG MK  E++ A+  M +D +  +++PR WA  I++PLL  + +
Sbjct: 100 TALLFAGRAGTSLTAEIGLMKAGEQLIAMEMMAVDPLARVLAPRFWAGFIAMPLLAAIFS 159

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTA-TLANIFTGLIKAPFMACAIGIVAMKEGFA 334
              I+G   V      +    F+S+  +    + ++  G+IK+     A+  +A+ +G+ 
Sbjct: 160 AVGILGGYFVGVGLIGVDPGAFWSQMQAGVDVMDDVLNGVIKSVVFGVAVTFIALYQGYE 219

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                  + +  T  VV +   V+ +D +     F+
Sbjct: 220 AKATPEGVSRATTRTVVIASLTVLALDFVLTALMFS 255


>gi|325922508|ref|ZP_08184271.1| conserved hypothetical integral membrane protein [Xanthomonas
           gardneri ATCC 19865]
 gi|325924178|ref|ZP_08185738.1| conserved hypothetical integral membrane protein [Xanthomonas
           gardneri ATCC 19865]
 gi|325545309|gb|EGD16603.1| conserved hypothetical integral membrane protein [Xanthomonas
           gardneri ATCC 19865]
 gi|325547016|gb|EGD18107.1| conserved hypothetical integral membrane protein [Xanthomonas
           gardneri ATCC 19865]
          Length = 249

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 75/126 (59%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
           S   + F+  L+R++Y VG   +P++ +     G V+  QG   L+ +GA      L+ +
Sbjct: 24  SVPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTLQGYRTLTTYGASDALSTLLGL 83

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
              RE+  +LTA++  GR+GS+I AE+G M+  ++I A+  M +D +   ++PR WA ++
Sbjct: 84  SLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKALELMAIDPIAKAVAPRFWAAVL 143

Query: 266 SLPLLT 271
           ++PLLT
Sbjct: 144 TVPLLT 149


>gi|42524509|ref|NP_969889.1| ABC-type organic solvent resistance transport system permease
           protein [Bdellovibrio bacteriovorus HD100]
 gi|39576718|emb|CAE80882.1| ABC-type organic solvent resistance transport system permease
           protein [Bdellovibrio bacteriovorus HD100]
          Length = 275

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 117/223 (52%), Gaps = 4/223 (1%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
            +IR M ++G   + ++ L    TG  ++ Q       F A       +++   RE+G +
Sbjct: 52  EIIRHMEFIGNQSIGIICLTGGFTGLALSLQLYLGFKLFNAVNMVGPTVALGITRELGPV 111

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           LT +++A R+G A+ A +G+M++NE+IDA+  MG++  + L+SPR+ A  I +PLL  + 
Sbjct: 112 LTGLIVAARAGGAMAARLGTMRVNEQIDALDVMGVNTKQYLVSPRLVAAFICMPLLVAVF 171

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
           +F A++G+  +  K   +  AVF+ +      + +I  GL+K         ++    GF 
Sbjct: 172 DFVAMLGSWFLCVKMVGLDEAVFWQKIADFIEIRHINEGLLKGMVFGIYFALMCTYRGFN 231

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIID----SLFAIFYFAIGI 373
               +  +G+     VVQS+  +II+D    ++  +FY  +GI
Sbjct: 232 TTGGAKGVGEATNQGVVQSMVGIIILDYFATNMIRLFYSLVGI 274


>gi|189347228|ref|YP_001943757.1| hypothetical protein Clim_1737 [Chlorobium limicola DSM 245]
 gi|189341375|gb|ACD90778.1| protein of unknown function DUF140 [Chlorobium limicola DSM 245]
          Length = 264

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 110/214 (51%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           K K +    + Q    G   +P+V++ +   G+++A +    L  FGA+       SI  
Sbjct: 40  KLKRYWRDFLDQATICGTDSIPIVLVSAVSIGSLLAIEVGNLLEDFGAKTMLGRSTSISV 99

Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267
           +RE+G LL  +M++ R GS   AE+G+MKI+E+IDA+R  G D V  L+ PR+ A ++  
Sbjct: 100 IRELGPLLMGLMLSARFGSRNGAELGAMKISEQIDALRAFGTDPVAKLVMPRLAAALVMF 159

Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327
             LT L++F+ +  A+ +   Y+ +   +F++  +      +   G  KAP  A  I +V
Sbjct: 160 IPLTALSDFAGLQSAAYLAEHYHHLDPGIFWNAVYPRLGPKDFVVGFAKAPVFAIIITLV 219

Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           +   GF     +  +G+     +V S  +V+I +
Sbjct: 220 SSYNGFIAKGGTAGVGRATIKGIVVSSGLVLIAN 253


>gi|213584877|ref|ZP_03366703.1| hypothetical protein SentesTyph_28030 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 179

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/171 (33%), Positives = 94/171 (54%), Gaps = 5/171 (2%)

Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261
           L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+  E++ ++  M +D +R +ISPR W
Sbjct: 9   LVALSLLRELGPVVAALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFW 68

Query: 262 ALIISLPLLTILANFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAP 318
           A +ISLPLLTI+     I G S+  V WK  D  F  F+S   +      ++   LIK+ 
Sbjct: 69  AGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGF--FWSAMQNAVDWRMDLVNCLIKSV 126

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
             A  +  +A+  G+     S  + +  T  VV +   V+ +D +     F
Sbjct: 127 VFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASLAVLGLDFVLTALMF 177


>gi|262196626|ref|YP_003267835.1| hypothetical protein Hoch_3440 [Haliangium ochraceum DSM 14365]
 gi|262079973|gb|ACY15942.1| protein of unknown function DUF140 [Haliangium ochraceum DSM 14365]
          Length = 268

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 101/198 (51%), Gaps = 5/198 (2%)

Query: 158 RQMYYVG-VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDL-MSILQLREIGVLL 215
           RQMY +G  S V + + + F  G V   QGA QL +   ++  +    S L ++++G  L
Sbjct: 51  RQMYDIGNRSFVFIAVTMGFF-GMVFIYQGALQLDRIVGDVSLLGREFSKLLVKDLGPSL 109

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA+M+A R G+ I AE+GSM + E++DA+R  G+  +  L++PR+ A ++ +  L I   
Sbjct: 110 TAMMLATRVGAGIAAELGSMTVTEQVDALRMSGVRPIDYLVAPRLLAALVMVTALAIFGT 169

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             A     +  W Y+D+    +F    S     ++  GL+KA   A  I ++A   G   
Sbjct: 170 AVAFAAGGLTAWAYFDLNPRAYFD--LSQVEFGHLGLGLVKAVVYAANIPLIAAFCGLRA 227

Query: 336 GVHSNSLGKKVTTCVVQS 353
              S  +G+  T  V+ S
Sbjct: 228 HGGSAGVGRATTAAVIGS 245


>gi|193213347|ref|YP_001999300.1| hypothetical protein Cpar_1708 [Chlorobaculum parvum NCIB 8327]
 gi|193086824|gb|ACF12100.1| protein of unknown function DUF140 [Chlorobaculum parvum NCIB 8327]
          Length = 265

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 113/214 (52%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           K K +   ++ Q    GV  +P+V++ S   GA+++ +    L +FGA+       S   
Sbjct: 40  KAKRYWRDVLDQALICGVESIPIVLVSSISIGALMSMEVGNLLEEFGAKTMLGRSTSNAV 99

Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267
           LRE+G LL  +M++ R GS   AE+G+M+I+E+IDA+R  G D +  L+ PR+ A +I  
Sbjct: 100 LRELGPLLMGLMLSARYGSRNGAELGAMQISEQIDALRAFGTDPIAKLVMPRLLAALIMF 159

Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327
             L  L++F+ +  A++V   Y+ +   +F++  +      +     +KAP  A  I +V
Sbjct: 160 VPLIALSDFAGLQTAALVAQFYHKLDPGIFWNSIYPRLLPKDFVVSFLKAPVFAIIITLV 219

Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           +   GF+    +  +G+     +V S  +V++ +
Sbjct: 220 SSFNGFSAHGGTAGVGRSTIKGIVASSGLVLVAN 253


>gi|285016849|ref|YP_003374560.1| ABC transporter permease [Xanthomonas albilineans GPE PC73]
 gi|283472067|emb|CBA14574.1| putative abc transporter permease abc transporter, permease protein
           [Xanthomonas albilineans]
          Length = 249

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 74/126 (58%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
           S   +  L  LIR++Y VG   +P++ +     G V+  QG   L+ +GA      L+ +
Sbjct: 24  SLPSRDLLAELIREIYKVGARSLPIIAVGGAFVGLVLTLQGYRTLTTYGASDALSTLLGL 83

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
              RE+  +LTA++  GR+GS+I AE+G M+  ++I A+  M +D V   ++PR WA ++
Sbjct: 84  SLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKALELMAIDPVAKAVAPRFWAAVL 143

Query: 266 SLPLLT 271
           ++PLLT
Sbjct: 144 TVPLLT 149


>gi|254423231|ref|ZP_05036949.1| conserved domain protein [Synechococcus sp. PCC 7335]
 gi|196190720|gb|EDX85684.1| conserved domain protein [Synechococcus sp. PCC 7335]
          Length = 291

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 6/209 (2%)

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G   V  VI  +   G +   Q A ++S+FGA        +     E+  +LTA ++A +
Sbjct: 81  GPRCVASVIATNVCAGLIFGIQTAREMSRFGAVSSLGSAFAAGYCSELAPILTAGVLACQ 140

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
            GSA  AEI +MK+ ++IDA++ +  D +  L+ PR+ A  + LP+LT+LA    ++   
Sbjct: 141 VGSAFAAEIAAMKLTQQIDALKMLRTDPIDYLVMPRVIACAVMLPMLTVLALVCGVMSGG 200

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
            +   YY +P   F        +++++   + KA      I I +   G    +H   +G
Sbjct: 201 FLTTYYYHLPMGTFLDGVRGALSVSDVLLIMGKAILFGLVIAIASCSRGLTSALHGKGVG 260

Query: 344 KKVTTCVVQS------ISIVIIIDSLFAI 366
           +  T+ V+ +      I +VI   +L AI
Sbjct: 261 QSATSAVMMAWIALFFIDLVIAFLALLAI 289


>gi|327399719|ref|YP_004340588.1| hypothetical protein Hipma_1573 [Hippea maritima DSM 10411]
 gi|327182348|gb|AEA34529.1| protein of unknown function DUF140 [Hippea maritima DSM 10411]
          Length = 254

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 100/212 (47%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
            QMY++GV    +V L S   G V   Q      +FGAE      +++   RE+  +LTA
Sbjct: 43  EQMYFIGVKSTLIVALTSMFVGMVEVLQIYHGFHKFGAESMIGYTVAVSLGRELSPVLTA 102

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +MI  R+ SA+ AE+G+M++ ++IDA+  M ++ +  L++PR+ A  + LP L  L+N  
Sbjct: 103 LMIVARNVSAMAAELGTMRVTQQIDALEVMAVNPINFLVAPRVIATTVMLPALVSLSNAI 162

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
             IG  +V      +    +         + ++  GLIKA      I ++    G     
Sbjct: 163 GNIGGYLVGIGVLGLNPTSYTKNIQVYIDMTDLTYGLIKAAVFGLIISLIGCYMGLTTKG 222

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
            S  +G   T  VV +   V++ D     F F
Sbjct: 223 GSRGVGISTTKAVVAASISVLVADYFLTAFLF 254


>gi|309782892|ref|ZP_07677612.1| toluene tolerance ABC transporter, permease protein [Ralstonia sp.
           5_7_47FAA]
 gi|308918316|gb|EFP63993.1| toluene tolerance ABC transporter, permease protein [Ralstonia sp.
           5_7_47FAA]
          Length = 255

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 114/216 (52%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +I Q+ ++G     ++ +     G V+  QG   L+++G+E     L+++  +RE+G ++
Sbjct: 40  VIEQLRFIGNDSFIIIAVSGLFVGFVLGLQGYNTLNRYGSEQALGLLVALSLVRELGPVV 99

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+G+++ AEIG MK  E++ A+  M +D +  +++PR WA  I++PLL  + +
Sbjct: 100 TALLFAGRAGTSLTAEIGLMKAGEQLIAMEMMAVDPLARVLAPRFWAGFIAMPLLAAIFS 159

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTA-TLANIFTGLIKAPFMACAIGIVAMKEGFA 334
              I+G   V      +    F+S+  +    + ++  G+IK+     A+  +A+ +G+ 
Sbjct: 160 AVGILGGYFVGVGLIGVDPGAFWSQMQAGVDVMDDVLNGVIKSFVFGVAVTFIALYQGYE 219

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                  + +  T  VV +   V+ +D +     F+
Sbjct: 220 AKATPEGVSRATTRTVVIASLTVLALDFVLTALMFS 255


>gi|34540774|ref|NP_905253.1| hypothetical protein PG1033 [Porphyromonas gingivalis W83]
 gi|34397088|gb|AAQ66152.1| conserved hypothetical protein [Porphyromonas gingivalis W83]
          Length = 248

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 115/211 (54%), Gaps = 9/211 (4%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL- 214
           LI+++  +GV  V +VI+ISF  GAVI  Q +  ++      F+I   +    REI +L 
Sbjct: 33  LIKEIDKLGVDSVWIVIIISFFIGAVITIQLSLNMTSPLIPRFTIGYST----REIILLE 88

Query: 215 ----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
               +  +++AG+ GS+I +E+G+M++ E+IDA+  MG++    LI P+I   ++ +P+L
Sbjct: 89  FSSTVMCLILAGKVGSSIASELGTMRVTEQIDAMEVMGVNSANYLILPKIIGFMLFVPVL 148

Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330
           +I++  + I+G  +      ++P + F        +  N+F  +IK+   A  I  VA  
Sbjct: 149 SIISMSTGIVGGYLACSLVPNLPRSDFEYGLQLFFSPYNVFYSIIKSVAYAFIISSVAGY 208

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            G+ V   +  +GK  T  VVQ   +V++ D
Sbjct: 209 YGYTVKGGALQVGKASTNAVVQCSILVLVAD 239


>gi|329962630|ref|ZP_08300578.1| hypothetical protein HMPREF9446_02167 [Bacteroides fluxus YIT
           12057]
 gi|328529661|gb|EGF56559.1| hypothetical protein HMPREF9446_02167 [Bacteroides fluxus YIT
           12057]
          Length = 258

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 127/258 (49%), Gaps = 26/258 (10%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           VK++         +G  I   G   A   + + F    I +M  +GV+ + +V+LISF  
Sbjct: 6   VKYLRVMIKALKTVGRYIMLMGRVFARPERMRMFFRQYINEMEQLGVNSIGIVLLISFFI 65

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIG 233
           GAVI  Q    +       +++  ++    REI +L     +  +++AG+ GS I +E+G
Sbjct: 66  GAVITIQIKLNIESPFMPRWTVGYVT----REIMLLEFSSSIMCLILAGKVGSNIASELG 121

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW-----K 288
           +M++ ++IDA+  MG++    LI P+I A++ ++PL+   + F+ IIGA    W      
Sbjct: 122 TMRVTQQIDALEIMGVNSANYLILPKISAMVTTIPLMVTFSIFAGIIGAFCTCWFGGIMS 181

Query: 289 YYDIPFAV---FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
             D+ + +   F   F        I+ G+IK+ F A  I  V+   G+ V   S  +GK 
Sbjct: 182 AVDLEYGLQYMFVEWF--------IWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKA 233

Query: 346 VTTCVVQSISIVIIIDSL 363
            T  VV S S++I+   L
Sbjct: 234 STDSVVCS-SVLILFSDL 250


>gi|241664474|ref|YP_002982834.1| hypothetical protein Rpic12D_2892 [Ralstonia pickettii 12D]
 gi|240866501|gb|ACS64162.1| protein of unknown function DUF140 [Ralstonia pickettii 12D]
          Length = 255

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 114/216 (52%), Gaps = 1/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           ++ Q+ ++G     ++ +     G V+  QG   L+++G+E     L+++  +RE+G ++
Sbjct: 40  VLEQLRFIGNDSFIIIAVSGLFVGFVLGLQGYNTLNRYGSEQALGLLVALSLVRELGPVV 99

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+G+++ AEIG MK  E++ A+  M +D +  +++PR WA  I++PLL  + +
Sbjct: 100 TALLFAGRAGTSLTAEIGLMKAGEQLIAMEMMAVDPLARVLAPRFWAGFIAMPLLAAIFS 159

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTA-TLANIFTGLIKAPFMACAIGIVAMKEGFA 334
              I+G   V      +    F+S+  +    + ++  G+IK+     A+  +A+ +G+ 
Sbjct: 160 AVGILGGYFVGVGLIGVDPGAFWSQMQAGVDVMDDVLNGVIKSVVFGVAVTFIALYQGYE 219

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                  + +  T  VV +   V+ +D +     F+
Sbjct: 220 AKATPEGVSRATTRTVVIASLTVLALDFVLTALMFS 255


>gi|168699832|ref|ZP_02732109.1| probable permease of ABC transporter [Gemmata obscuriglobus UQM
           2246]
          Length = 276

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 112/211 (53%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +R    VG + V VV +     G V+A Q   Q    G E     ++ I  +RE+G +L 
Sbjct: 49  LRVAVEVGTNSVGVVAITGTFIGMVLAVQAYGQFHTIGMETSLGAVIHISVVRELGPVLA 108

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AVM+AGR GSA+ AE+ +M++ E++DA+  +G+D V+ L+ PR+ A  + LPLLT+LA+ 
Sbjct: 109 AVMLAGRVGSAMAAELATMRVTEQLDALACLGVDPVKYLVGPRLLACFLLLPLLTVLADV 168

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
             + G+S++    Y I    ++        L ++  GL+KA      + ++A   GF   
Sbjct: 169 MGLFGSSLICLHVYHIDSHHYWRHTREFVKLWDVSVGLMKAFVFGAVLSLIACHRGFNSK 228

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             +  +G+  T   V +   ++IID L A+ 
Sbjct: 229 AGAAGVGRAATEAFVIAFVAILIIDFLLAML 259


>gi|72382734|ref|YP_292089.1| putative transporter, membrane component [Prochlorococcus marinus
           str. NATL2A]
 gi|72002584|gb|AAZ58386.1| Protein of unknown function DUF140 [Prochlorococcus marinus str.
           NATL2A]
          Length = 249

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 106/219 (48%), Gaps = 8/219 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI Q+   G     +V++     G V   Q A +LS+ G       L++I   REI  LL
Sbjct: 35  LIDQLMEAGPGSFLIVLITGIAAGTVFNIQVAAELSKQGLGSAVGGLLAIGMAREIAPLL 94

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL-- 273
           TA ++ G+  +A  A+IG+MK+ E+IDAI  +  D V  L+ PRI A+++  P+  +L  
Sbjct: 95  TATLLTGKVATAYAAQIGTMKVTEQIDAITMLQTDPVEYLVVPRICAMVVMAPIQCLLFF 154

Query: 274 --ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
             A FS    ++I+    Y IP ++F++        +++   L+KA      I I+A   
Sbjct: 155 SIALFSGQFSSTIL----YQIPPSIFWNSVREWLITSDLPFMLVKALVFGLLIAIIACGW 210

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G         +G   T  VV ++  V ++D L     FA
Sbjct: 211 GLTTRGGPKEVGSSTTGAVVMTLITVSLVDVLLTQVLFA 249


>gi|270595146|ref|ZP_06221505.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
 gi|270318343|gb|EFA29500.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
          Length = 133

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 46/115 (40%), Positives = 76/115 (66%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++QM+ +GV  + +++L     G V+  QG   L  F AE     L+++  LRE+G ++
Sbjct: 19  LVKQMHVLGVQSLLIILLSGLFIGMVLGLQGYVVLVDFSAETSJGQLVALSLLRELGPVV 78

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
           TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+P+L
Sbjct: 79  TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPIL 133


>gi|159476846|ref|XP_001696522.1| lipid transfer machine permease [Chlamydomonas reinhardtii]
 gi|158282747|gb|EDP08499.1| lipid transfer machine permease [Chlamydomonas reinhardtii]
          Length = 245

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 113/213 (53%), Gaps = 2/213 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
            Q+  VG + + V +L +   G V   Q   + ++ G       ++++   RE+  ++TA
Sbjct: 23  EQLRLVGPASLGVSLLTAGFVGMVFTIQFVREFAKLGLTRSVGGVLALALSRELTPVVTA 82

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +++AGR GSA  AE+G+M+++E++D++R +  D V  L++PR+ A +I+ P+L +L  F 
Sbjct: 83  IILAGRVGSAFAAELGTMQVSEQMDSLRVLYTDPVDYLVTPRVLASMIAGPILNVLC-FL 141

Query: 278 AIIGASIVIWK-YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
             +GA++ +    Y++P  V         T  ++ T ++K+      +  ++   GF   
Sbjct: 142 MGMGAAVFLADIVYNVPANVIVDSARRALTSYDVMTSMVKSWVFGTVVATISCAWGFTTS 201

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
             +  +G+  T+ VV S+  + I D   ++ +F
Sbjct: 202 GGAKGVGESTTSAVVISLVTIFIADFFLSLVFF 234


>gi|124268284|ref|YP_001022288.1| hypothetical protein Mpe_A3100 [Methylibium petroleiphilum PM1]
 gi|124261059|gb|ABM96053.1| putative membrane protein [Methylibium petroleiphilum PM1]
          Length = 260

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 114/217 (52%), Gaps = 1/217 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           ++ Q++++G   + ++ +     G V+  QG + L ++G+      L+++  +RE+G ++
Sbjct: 44  VVDQVHFLGNHSLAIITVSGLFVGFVLGLQGYYTLQRYGSSEALGLLVALSLVRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++ AGR+G+++ AEIG MK  E++ A+  M +D V+ +++PR W  + ++PLL  + +
Sbjct: 104 TALLFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVDPVQRVLAPRFWGGVFAMPLLAAVFS 163

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334
              I+G   V      I    F+S+      +  ++  G++K+      +  VA+ EG+ 
Sbjct: 164 AVGILGGWAVGVLLIGIDAGGFWSQMQGGVDVFKDVGNGIVKSMVFGVTVTFVALWEGYT 223

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
                  + +  T  VV +   V+ +D +     F+I
Sbjct: 224 CQPTPEGVSRATTRTVVVASLAVLGLDFVLTAMMFSI 260


>gi|159903919|ref|YP_001551263.1| putative transporter, membrane component [Prochlorococcus marinus
           str. MIT 9211]
 gi|159889095|gb|ABX09309.1| possible transporter, membrane component [Prochlorococcus marinus
           str. MIT 9211]
          Length = 248

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 105/215 (48%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI Q+   G +   +V++     G V   Q A +LS+ G       L++I   REI  LL
Sbjct: 34  LIDQLMEAGPASFIIVLITGISAGTVFNIQVAAELSRQGVGSEVGGLLAIGLAREIAPLL 93

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA ++ G+  +A  A++G+MK+ E+IDAI  +  D +  L+ PR+ A++I  PL  +L  
Sbjct: 94  TATLLTGKVATAYAAQLGTMKVTEQIDAITMLQTDPIDYLVVPRVIAMVIMAPLQCLLFF 153

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             A+    I    +Y IP  VF++  +    +++I   LIKA      I ++A   G   
Sbjct: 154 TVALWSGQISSTYFYSIPINVFWNSVNEWLVISDIPFMLIKAVVFGFQIAVIACGWGLTT 213

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
              +  +G   T  VV ++  V ++D L     F 
Sbjct: 214 RGGAKEVGTSTTGAVVMTLLSVSLMDVLLTKVLFG 248


>gi|330991409|ref|ZP_08315360.1| putative ABC transporter permease protein [Gluconacetobacter sp.
           SXCC-1]
 gi|329761428|gb|EGG77921.1| putative ABC transporter permease protein [Gluconacetobacter sp.
           SXCC-1]
          Length = 261

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 96/171 (56%)

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           +G   +PVV L +  +G VIA Q     +Q+ A+     ++ +   RE+G +L  +M+AG
Sbjct: 53  IGFFSLPVVALTALFSGGVIALQSYTGFAQYHAQNAIAGIVILAVTRELGPVLAGLMVAG 112

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           R G+A+ AEIG+M++ ++IDA+ T+  + ++ L++PR+ A  ++LP L ++A+   ++G 
Sbjct: 113 RVGAAMSAEIGTMRVTDQIDALSTLSTNPMKYLVTPRLVAGTLALPFLVLVADILGVLGG 172

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
             V     D   + + +   ++  + ++  GL+KA      I ++    G+
Sbjct: 173 FTVCVMKLDFSPSAYIAATIASLKVMDVTVGLVKAAIFGFLIALMGCYHGY 223


>gi|21673166|ref|NP_661231.1| hypothetical protein CT0327 [Chlorobium tepidum TLS]
 gi|21646245|gb|AAM71573.1| conserved hypothetical protein [Chlorobium tepidum TLS]
          Length = 252

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 115/218 (52%)

Query: 144 ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203
           A+  K K +   ++ Q +  GV  +P+V++ S   GA+++ +    L +FGA+       
Sbjct: 23  ATLPKAKRYWRDVLDQAFICGVESIPIVLVSSISIGALMSMEVGNLLEEFGAKTMLGRST 82

Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263
           S   LRE+G LL  +M++ R G+   AE+G+M+I+E+IDA+R  G D +  L+ PR+ A 
Sbjct: 83  SNAVLRELGPLLMGLMLSARYGARNGAELGAMQISEQIDALRAFGTDPIAKLVMPRLLAA 142

Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323
           +I    L  L++F+ +   ++V   Y+ +   +F++  +      +     +KAP  A  
Sbjct: 143 LIMFVPLIALSDFAGLQTGALVAQYYHKLDPGIFWNSIYPRLLPMDFVVSFLKAPVFAII 202

Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           I +V+   GF+    +  +G+     +V S  +V++ +
Sbjct: 203 ITLVSSFNGFSARGGTAGVGRSTIKGIVASSGLVLVAN 240


>gi|190571416|ref|YP_001975774.1| hypothetical protein WPa_1028 [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|190357688|emb|CAQ55136.1| Putative membrane protein [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
          Length = 260

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 105/203 (51%), Gaps = 1/203 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           RQ+  +G   +P+V L     GAVI  Q +        E     L++I  ++E+G +L +
Sbjct: 49  RQIIEIGFFSLPIVGLTGVFIGAVIVLQSSLSGILINQEQVVPKLVTITIIKELGPVLIS 108

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +++ G+ GS+I AEIG+M+I E+IDA+ T+ ++  + LI PRI A +I  P+LT+ A+  
Sbjct: 109 LIMVGKVGSSIAAEIGTMRITEQIDALTTLDINPFKYLIVPRILASVIVFPILTVCADLI 168

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            I G  +     ++    ++         + +   GL+KA      I + +   G+    
Sbjct: 169 GIFGGYVTAVFEFNHNLNIYIKYTAQFFNMYDFIVGLMKATAFGAIISVSSCYYGYHCRE 228

Query: 338 HSNSLGKKVTTCVVQSISIVIII 360
            +  +G   T+ VV S SI+II+
Sbjct: 229 GARGVGIATTSTVVIS-SILIIL 250


>gi|90994584|ref|YP_537074.1| hypothetical protein 26 [Porphyra yezoensis]
 gi|122194637|sp|Q1XD94|YCF63_PORYE RecName: Full=Probable ABC transporter permease protein ycf63
 gi|90819148|dbj|BAE92517.1| unnamed protein product [Porphyra yezoensis]
          Length = 263

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 111/215 (51%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           +L+ Q+Y VG   + + +L +     V   Q A +     A      ++ I   RE+  +
Sbjct: 36  NLVEQIYIVGPGSLNITLLTACFISMVFTMQIAKEFLYLDAASAIGAVIVIAFTRELSPV 95

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           LTAV+IAG+ GS+  AEI +M+  E+IDA+  +  + +  L+ P++ +  + LP+L+I++
Sbjct: 96  LTAVIIAGKIGSSFTAEIATMETTEQIDALYLLNTNPIDYLVFPKVASCFLMLPILSIIS 155

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
             ++I  +  V +  YDIP +VF     +  ++++    L K+ F A  IG ++ + G  
Sbjct: 156 LTASIAISLFVAFVMYDIPSSVFLKSAFNALSISDFLICLEKSMFFAIIIGFISCQWGLT 215

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               +  +G   T+ VV  +  V I D + + F F
Sbjct: 216 SNGGAKGVGNSTTSSVVTILFTVFITDFVLSYFMF 250


>gi|58039399|ref|YP_191363.1| ABC transporter permease protein [Gluconobacter oxydans 621H]
 gi|58001813|gb|AAW60707.1| ABC transporter permease protein [Gluconobacter oxydans 621H]
          Length = 261

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 106/201 (52%), Gaps = 6/201 (2%)

Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211
           F  SLI   ++     +PVV L +  +GAVIA Q      Q+  +     ++ +   RE+
Sbjct: 46  FFSSLIETGFF----SLPVVALTALFSGAVIALQSYVGFGQYHVQSAIAGIVVLAVTREL 101

Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271
           G +L  +M+AGR G+A+ A+IG+M++ ++IDA+ T+  + ++ L++PR+ A  ++LP L 
Sbjct: 102 GPVLAGLMVAGRVGAAMSAQIGTMRVTDQIDALTTLSTNPMKYLVTPRLLAGTLALPCLV 161

Query: 272 ILANFSAIIGA-SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330
           ++A+   ++G  ++ + K    P     +   S  T+ ++  GL+KA      I ++   
Sbjct: 162 LVADILGVMGGFTVSVAKLGFSPSTYITATLDSLKTM-DVVVGLVKAAVFGFLIALLGCY 220

Query: 331 EGFAVGVHSNSLGKKVTTCVV 351
            G+     +  +G   T  VV
Sbjct: 221 NGYNSRGGAEGVGSATTAAVV 241


>gi|194337270|ref|YP_002019064.1| protein of unknown function DUF140 [Pelodictyon phaeoclathratiforme
           BU-1]
 gi|194309747|gb|ACF44447.1| protein of unknown function DUF140 [Pelodictyon phaeoclathratiforme
           BU-1]
          Length = 264

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 115/215 (53%), Gaps = 2/215 (0%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           K K +    + Q    G   +P+V++ +   GA++A +    L  FGA+       ++  
Sbjct: 40  KIKRYWRDFLDQAGICGTDSIPIVLVSAISIGALLAIEVGNLLEDFGAKTMLGRSTALSV 99

Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR-IWALIIS 266
           +RE+G LL  +M++ R GS   AE+G+M+I+E+IDA+R  G D +  L+ PR + ALI+ 
Sbjct: 100 IRELGPLLMGLMLSARFGSRNGAELGAMQISEQIDALRAFGTDPIAKLVMPRLVAALIMF 159

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326
           LP LT L++F+ +  A+ +   Y+ I   +F++  +      +   G +KAP  A  I +
Sbjct: 160 LP-LTALSDFAGLQSAAYMAEHYHRIDPGIFWNAVYPRLAPKDFVVGFLKAPVFAIIITL 218

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           V+   GF+    +  +G+     +V S  +V+I +
Sbjct: 219 VSSFNGFSARGGTAGVGRATIKGIVVSSGLVLIAN 253


>gi|260435355|ref|ZP_05789325.1| ABC-type transport system, permease component [Synechococcus sp. WH
           8109]
 gi|260413229|gb|EEX06525.1| ABC-type transport system, permease component [Synechococcus sp. WH
           8109]
          Length = 249

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 110/222 (49%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G+  A++ + +     L  QM   G   + +V++IS   G+V   Q A +L++ GA    
Sbjct: 18  GQAVAATLRGRINRGELFEQMLEAGPGSLLIVLIISVAAGSVFNIQVAAELTRQGAGSTV 77

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
             +++I   REI  LLT+ ++AG+  +A  A++G+MK+ E+IDAI  +  D V  L+ PR
Sbjct: 78  GGILAIGLAREIAPLLTSCLLAGKVATAYAAQLGTMKVTEQIDAITMLRTDPVEYLVVPR 137

Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319
           + A+++  P+      F A+    +     Y+IP AVF++   +     ++   L+KA  
Sbjct: 138 MIAMVVMAPVQCFFFFFVAVWSGQLTSTALYNIPPAVFWTSVQTWMNPLDLPFMLVKALV 197

Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
               I  VA   G         +G   T  VV  + +V ++D
Sbjct: 198 FGLIIATVACGWGLTTRGGPKEVGTSTTGAVVMILILVALMD 239


>gi|53720756|ref|YP_109742.1| hypothetical protein BPSL3149 [Burkholderia pseudomallei K96243]
 gi|53724275|ref|YP_104245.1| ABC transporter permease [Burkholderia mallei ATCC 23344]
 gi|67641604|ref|ZP_00440380.1| ABC transporter, permease protein [Burkholderia mallei GB8 horse 4]
 gi|76810397|ref|YP_335067.1| ABC transporter permease [Burkholderia pseudomallei 1710b]
 gi|83719902|ref|YP_443507.1| ABC transporter permease [Burkholderia thailandensis E264]
 gi|121601502|ref|YP_994512.1| ABC transporter, permease protein [Burkholderia mallei SAVP1]
 gi|124386292|ref|YP_001027757.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10229]
 gi|126441452|ref|YP_001060680.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 668]
 gi|126450665|ref|YP_001082296.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10247]
 gi|126451565|ref|YP_001067964.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 1106a]
 gi|134283213|ref|ZP_01769914.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 305]
 gi|167002607|ref|ZP_02268397.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           mallei PRL-20]
 gi|167582553|ref|ZP_02375427.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           thailandensis TXDOH]
 gi|167721498|ref|ZP_02404734.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei DM98]
 gi|167740468|ref|ZP_02413242.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 14]
 gi|167817681|ref|ZP_02449361.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 91]
 gi|167826076|ref|ZP_02457547.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 9]
 gi|167847585|ref|ZP_02473093.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei B7210]
 gi|167896161|ref|ZP_02483563.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 7894]
 gi|167904546|ref|ZP_02491751.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei NCTC 13177]
 gi|167912808|ref|ZP_02499899.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 112]
 gi|167920767|ref|ZP_02507858.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei BCC215]
 gi|217424760|ref|ZP_03456257.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 576]
 gi|226198280|ref|ZP_03793851.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|237814076|ref|YP_002898527.1| ABC transporter, permease protein [Burkholderia pseudomallei
           MSHR346]
 gi|242317944|ref|ZP_04816960.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 1106b]
 gi|254175241|ref|ZP_04881902.1| ABC transporter, permease protein [Burkholderia mallei ATCC 10399]
 gi|254180406|ref|ZP_04887004.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 1655]
 gi|254190369|ref|ZP_04896877.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254198428|ref|ZP_04904849.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei S13]
 gi|254201319|ref|ZP_04907683.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           mallei FMH]
 gi|254206661|ref|ZP_04913012.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           mallei JHU]
 gi|254258882|ref|ZP_04949936.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 1710a]
 gi|254300642|ref|ZP_04968087.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 406e]
 gi|254357286|ref|ZP_04973560.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           mallei 2002721280]
 gi|257137708|ref|ZP_05585970.1| ABC transporter, permease protein [Burkholderia thailandensis E264]
 gi|52211170|emb|CAH37159.1| putative membrane protein [Burkholderia pseudomallei K96243]
 gi|52427698|gb|AAU48291.1| ABC transporter, permease protein [Burkholderia mallei ATCC 23344]
 gi|76579850|gb|ABA49325.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710b]
 gi|83653727|gb|ABC37790.1| ABC transporter, permease protein [Burkholderia thailandensis E264]
 gi|121230312|gb|ABM52830.1| ABC transporter, permease protein [Burkholderia mallei SAVP1]
 gi|124294312|gb|ABN03581.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10229]
 gi|126220945|gb|ABN84451.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 668]
 gi|126225207|gb|ABN88747.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 1106a]
 gi|126243535|gb|ABO06628.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10247]
 gi|134245408|gb|EBA45501.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 305]
 gi|147747213|gb|EDK54289.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           mallei FMH]
 gi|147752203|gb|EDK59269.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           mallei JHU]
 gi|148026350|gb|EDK84435.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           mallei 2002721280]
 gi|157810484|gb|EDO87654.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 406e]
 gi|157938045|gb|EDO93715.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|160696286|gb|EDP86256.1| ABC transporter, permease protein [Burkholderia mallei ATCC 10399]
 gi|169655168|gb|EDS87861.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei S13]
 gi|184210945|gb|EDU07988.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 1655]
 gi|217392216|gb|EEC32241.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 576]
 gi|225929800|gb|EEH25816.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|237505137|gb|ACQ97455.1| ABC transporter, permease protein [Burkholderia pseudomallei
           MSHR346]
 gi|238522557|gb|EEP86001.1| ABC transporter, permease protein [Burkholderia mallei GB8 horse 4]
 gi|242141183|gb|EES27585.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 1106b]
 gi|243061712|gb|EES43898.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           mallei PRL-20]
 gi|254217571|gb|EET06955.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 1710a]
          Length = 255

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 118/214 (55%), Gaps = 1/214 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q++++G     ++ +     G V+  QG + L+++G+E     L+++  +RE+G +++A
Sbjct: 42  KQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVSA 101

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+++ AEIG MK  E++ A+  M +D ++ +I+PR+WA +I++PLL  + +  
Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPLKNVIAPRMWAGVIAMPLLAAIFSAV 161

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            ++G  +V      +    F+S+      + A++  G+IK+     A+  +A+ +G+   
Sbjct: 162 GVLGGYVVGVLLIGVDPGAFWSQMQGGVEVWADVGNGVIKSVVFGFAVTFIALFQGYEAK 221

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                +    T  VV +   V+ +D L     F+
Sbjct: 222 PTPEGVSHATTKTVVYASLAVLGLDFLLTALMFS 255


>gi|160900967|ref|YP_001566549.1| hypothetical protein Daci_5535 [Delftia acidovorans SPH-1]
 gi|160366551|gb|ABX38164.1| protein of unknown function DUF140 [Delftia acidovorans SPH-1]
          Length = 260

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 117/215 (54%), Gaps = 3/215 (1%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG-AEIFSIDLMSILQLREIGVLLTA 217
           Q++++G   + ++ +     G V+  QG + L ++G AE   + L+++  +RE+G ++TA
Sbjct: 47  QIHFLGNYSLAIIGVSGLFVGFVLGLQGYYTLQRYGSAEALGL-LVALSLVRELGPVVTA 105

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+A+ AEIG MK  E++ A+  M +D VR +++PR  A +I++PLL  + +  
Sbjct: 106 LLFAGRAGTALTAEIGLMKAGEQLSAMEMMAVDPVRRILAPRFVAGLIAMPLLAAVFSAV 165

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            +IG  +V      +    F+ +  +      ++  G++K+     A+  +A+ +G+A  
Sbjct: 166 GVIGGWLVGVVMIGVDGGAFWGQMQNGVDWWYDLGNGVLKSLVFGVAVTFIALLQGYAAK 225

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
                + +  T  VV +   V+ +D L     F++
Sbjct: 226 PTPEGVSRATTRTVVMASLAVLGLDFLLTATMFSL 260


>gi|213018814|ref|ZP_03334622.1| putative membrane protein [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|212995765|gb|EEB56405.1| putative membrane protein [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 244

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 105/203 (51%), Gaps = 1/203 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           RQ+  +G   +P+V L     GAVI  Q +        E     L++I  ++E+G +L +
Sbjct: 33  RQIIEIGFFSLPIVGLTGVFIGAVIVLQSSLSGILINQEQVVPKLVTITIIKELGPVLIS 92

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +++ G+ GS+I AEIG+M+I E+IDA+ T+ ++  + LI PRI A +I  P+LT+ A+  
Sbjct: 93  LIMVGKVGSSIAAEIGTMRITEQIDALTTLDINPFKYLIVPRILASVIVFPILTVCADLI 152

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            I G  +     ++    ++         + +   GL+KA      I + +   G+    
Sbjct: 153 GIFGGYVTAVFEFNHNLNIYIKYTAQFFNMYDFIVGLMKATAFGAIISVSSCYYGYHCRE 212

Query: 338 HSNSLGKKVTTCVVQSISIVIII 360
            +  +G   T+ VV S SI+II+
Sbjct: 213 GARGVGIATTSTVVIS-SILIIL 234


>gi|183221249|ref|YP_001839245.1| ABC transporter permease [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911340|ref|YP_001962895.1| ABC transporter membrane protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167776016|gb|ABZ94317.1| Membrane protein of an ABC transporter complex [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167779671|gb|ABZ97969.1| ABC-type transport system, permease; putative resistance to organic
           solvant; putative membrane protein [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 258

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 111/220 (50%), Gaps = 9/220 (4%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           ++ QM+  GV  + VV ++S  TG ++       L  FGAE     L++I   RE+   +
Sbjct: 40  ILEQMFIAGVGSLFVVSIVSVFTGMILGLNTGLGLRDFGAEGQIGLLLTITLTREMSPFM 99

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           T++++A   GSA+ AEIG+MK++EEIDA+  M +  +R L+ PRI    + +P+L + + 
Sbjct: 100 TSLILAASVGSAMAAEIGTMKVSEEIDALEVMSISPIRYLVMPRIVGFSLMVPVLCVYS- 158

Query: 276 FSAIIGASIVIWKYYDIP------FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329
            +A+      I  ++ +       F   + R  S   L +++ GL+K      +I  ++ 
Sbjct: 159 -AALGILGGGIVGHFQLGIDIISYFQDVYYRISSVPGLKDLYVGLLKGYVFGLSIATISC 217

Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS-LFAIFY 368
            +G      +  +G+     VV S  +VI     L A+FY
Sbjct: 218 SQGLRTEGGAIGVGQTTRKAVVTSFLMVIFSGYVLTALFY 257


>gi|189425024|ref|YP_001952201.1| hypothetical protein Glov_1965 [Geobacter lovleyi SZ]
 gi|189421283|gb|ACD95681.1| protein of unknown function DUF140 [Geobacter lovleyi SZ]
          Length = 270

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 113/215 (52%), Gaps = 3/215 (1%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q+Y+ G+    +++L++ + G VI  Q    +      +    L+ ++ L E+G LL
Sbjct: 53  LLKQLYFTGLEAAKIIVLVAVILGTVIVSQVIGLVGGGNGSLIGKVLVWVVFL-ELGPLL 111

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA+++  RSG+AI AE+G+MKIN EI A+  +G+D  R L+ PR+     S+ LLTI   
Sbjct: 112 TAMIVIARSGTAIAAELGAMKINGEIAALERLGIDPERYLLLPRVIGAATSVMLLTIYFV 171

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
            ++ +G  +++   + I +  F     ++  +  +   + KA      I ++    G +V
Sbjct: 172 LTSFVGGFLIVSFGHHISYDQFIQGIVASLGIREVVVLMAKAAAFGLIIPLICCNAGMSV 231

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G  +  + +  T  V+ S+  + ++D +  I Y A
Sbjct: 232 GTSATEIPQAATRAVITSLFSIFVLDGV--ITYLA 264


>gi|307105433|gb|EFN53682.1| hypothetical protein CHLNCDRAFT_10117 [Chlorella variabilis]
          Length = 256

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 114/215 (53%), Gaps = 2/215 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + Q+  VG   + V +L +   G V   Q   + ++ G       ++++   RE+  ++T
Sbjct: 33  LDQLNMVGPRSLGVCLLTAAFVGMVFTIQFIREFAKLGLTRSVGGVLALALSRELTPVVT 92

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           ++++AGR GSA  AE+G+M+++E+ D++R +G D V  LI+PR+ A +++ P+L +L  F
Sbjct: 93  SIIVAGRVGSAFAAELGTMQVSEQTDSLRVLGSDPVDYLITPRVMACMVAGPILNLLC-F 151

Query: 277 SAIIGASIVIWK-YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              +GAS+++    Y++   V         +  ++ T +IK       I  V+   G+  
Sbjct: 152 CMGMGASVLLADTVYNVSCNVILDSAMRAISSWDVITSMIKCWVFGTIIATVSCAWGYTT 211

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
              +  +G+  T+ VV S+ ++ + D   ++ +F+
Sbjct: 212 TGGAKGVGESTTSAVVISLVLIFVFDFALSLLFFS 246


>gi|134096234|ref|YP_001101309.1| ABC transporter membrane protein [Herminiimonas arsenicoxydans]
 gi|133740137|emb|CAL63188.1| ABC transporter, permease protein [Herminiimonas arsenicoxydans]
          Length = 259

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 124/218 (56%), Gaps = 5/218 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           +I Q++++G   + ++ +     G V+  QG + L+++G+E  ++ L+  L L RE+G +
Sbjct: 44  VISQIHFIGNYSLVLIAVSGLFVGFVLGLQGYYTLNKYGSEQ-ALGLLVALSLTRELGPV 102

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TA++ AGR+G+++ AEIG MK  E++ A+  M ++ ++ +++PR WA ++++P+L  + 
Sbjct: 103 VTALLFAGRAGTSLTAEIGLMKAGEQLSAMEMMAVNPLQRVLAPRFWAGVVAMPVLAAIF 162

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGF 333
           +   IIG  IV  K   +    F+S+      +  ++  G+IK+     A+  VA+ +G+
Sbjct: 163 SAIGIIGGYIVGVKMIGVDEGAFWSQMQGGVDVWDDVLNGVIKSVVFGFAVTFVALYQGY 222

Query: 334 AVGVHSNSLGKKVT-TCVVQSISIVIIIDSLFAIFYFA 370
                   + +  T T V+ S+S V+ +D L     F+
Sbjct: 223 QAQPTPEGVARATTRTVVIASLS-VLWLDFLLTALMFS 259


>gi|33240854|ref|NP_875796.1| putative transporter, membrane component [Prochlorococcus marinus
           subsp. marinus str. CCMP1375]
 gi|33238383|gb|AAQ00449.1| ABC-type transport system involved in resistance to organic
           solvents permease component [Prochlorococcus marinus
           subsp. marinus str. CCMP1375]
          Length = 248

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 113/233 (48%), Gaps = 4/233 (1%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ--FGAEI 197
           G+   S+ K +     LI Q+   G +   +V++     G V   Q A +LS+   G+E+
Sbjct: 18  GQAVTSTTKGRFNKADLIDQLMEAGPASFLIVLITGVSAGTVFNIQVAAELSRQGLGSEV 77

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
               L++I   REI  LLTA ++ G+  +A  A++G+MK+ E+IDAI  +  D V  L+ 
Sbjct: 78  GG--LLAIGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLKTDPVEYLVV 135

Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
           PR+ A+++  PL  +L    A+    +    +Y IP  VF++       L ++   LIKA
Sbjct: 136 PRLIAMVVMAPLQCLLFFSVALWSGQVSSTAFYSIPPNVFWNSVKEWIVLTDLPFMLIKA 195

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                 I ++A   G      +  +G   T  VV ++  V ++D +     F+
Sbjct: 196 VVFGLQIAVIACGWGLTTRGGAKEVGTSTTGAVVMTLLTVSLMDVVLTKVLFS 248


>gi|89901707|ref|YP_524178.1| hypothetical protein Rfer_2936 [Rhodoferax ferrireducens T118]
 gi|89346444|gb|ABD70647.1| protein of unknown function DUF140 [Rhodoferax ferrireducens T118]
          Length = 260

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 117/226 (51%), Gaps = 4/226 (1%)

Query: 148 KFKGFLLSLIR-QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206
            FK F   LIR Q++++G   + ++ +     G V   QG + L ++G+      L+++ 
Sbjct: 37  SFKRF--GLIRDQIHFLGNYSLAIIAVSGLFVGFVFGLQGYYTLQRYGSSSALGLLVTLT 94

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            +RE+G ++TA++ AGR+G+++ AEIG MK  E+I  +  M +D V+ +++PR WA +I+
Sbjct: 95  LVRELGPVVTALLFAGRAGTSLTAEIGLMKAGEQISVMEMMAVDPVQRILAPRFWAGVIT 154

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIG 325
           +PLL  + +   IIG  +V      +    F+S+      +  ++  G++K+      + 
Sbjct: 155 MPLLAAVFSAMGIIGGWVVGVLMIGVDGGSFWSQIQEGVDVWQDLGNGIVKSIVFGFTVT 214

Query: 326 IVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
            +A+ +GF        +    T  VV +   V+ +D +     F +
Sbjct: 215 FIALLQGFEAQPTPEGVASATTRTVVVASLAVLGLDFILTAMMFTV 260


>gi|332041054|gb|EGI77422.1| hypothetical protein HGR_06456 [Hylemonella gracilis ATCC 19624]
          Length = 260

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 114/216 (52%), Gaps = 5/216 (2%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           Q++ +G   + ++++     G V+  QG + L  FG+E     ++++  +RE+G ++ A+
Sbjct: 47  QIHLLGNHSLAIIVVSGLFVGFVLGLQGYYILVDFGSEQALGQMVTLSLVRELGPVVAAL 106

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           + AGR+G+++ AEIG +K  E+++A+  M +D V+ +++PR WA +I+LPLLT  A FSA
Sbjct: 107 LFAGRAGTSLTAEIGLLKAGEQLNAMAMMAVDPVQRILAPRFWAGVIALPLLT--AVFSA 164

Query: 279 IIGASIVIWKYYDI---PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
           +      +     I   P A +     S +  +++  G+IK+      +   A+ +G+  
Sbjct: 165 VGVLGGWVVGVVMIGIDPGAFWGQMQASVSVWSDVGNGVIKSIVFGFTVSFTALLQGYEA 224

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
                 + +  T  VV +   V+ +D +     F I
Sbjct: 225 QPTPEGVSRATTRTVVMASLAVLGLDFVLTALMFTI 260


>gi|162146934|ref|YP_001601395.1| hypothetical protein GDI_1139 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|209543998|ref|YP_002276227.1| hypothetical protein Gdia_1852 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|161785511|emb|CAP55082.1| putative membrane protein [Gluconacetobacter diazotrophicus PAl 5]
 gi|209531675|gb|ACI51612.1| protein of unknown function DUF140 [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 261

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 98/188 (52%), Gaps = 10/188 (5%)

Query: 156 LIRQMYY----------VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
           L+R  +Y          +G   +PVV L +  +G VIA Q     +Q+  +     ++ +
Sbjct: 36  LVRPPFYWRIFFGALVEIGFFSLPVVALTALFSGGVIALQSYTGFAQYHVQSAIAGIVVL 95

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
              RE+G +L  +M+AGR G+A+ AEIG+M++ ++IDA+ T+  + ++ L++PR+ A  +
Sbjct: 96  AVTRELGPVLAGLMVAGRVGAAMAAEIGTMRVTDQIDALTTLSTNPMKYLVTPRLLAGTL 155

Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325
           +LP L ++A+   ++G   V     D    V+ +   +     ++  GL+KA      I 
Sbjct: 156 ALPCLVLVADILGVLGGFTVSVAKLDFSAPVYIAATFAAVKPIDVTVGLVKAGVFGFLIA 215

Query: 326 IVAMKEGF 333
           ++    G+
Sbjct: 216 LMGCYHGY 223


>gi|294677110|ref|YP_003577725.1| ABC transporter permease [Rhodobacter capsulatus SB 1003]
 gi|294475930|gb|ADE85318.1| ABC transporter, permease protein [Rhodobacter capsulatus SB 1003]
          Length = 259

 Score = 83.2 bits (204), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 117/233 (50%), Gaps = 11/233 (4%)

Query: 149 FKGFLLS-LIRQMYY----------VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
           F G +LS ++R  +Y          +G   +PVV + +F TGA +A Q     ++F AE 
Sbjct: 26  FTGAVLSHMLRPPFYSREFLQALLQIGWLSLPVVGMTAFFTGAALALQIYAGGARFSAES 85

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
               +++I  +RE+G +L  +M+A R  S+I AEIG+MK+ E+IDA+ T+  + ++ L  
Sbjct: 86  VVPSIVAIGMVRELGPVLGGLMVAARVASSIAAEIGTMKVTEQIDALVTLSTNPLKYLAV 145

Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
           PR+ A  +S+PLL  + +   ++G  ++  +      A +         L ++ +GL+K 
Sbjct: 146 PRVLAATLSVPLLVAVGDVIGVLGGWLIGTERLGFNSATYIRNTWEYLELWDVGSGLVKG 205

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                 + ++    G   G  +  +G+   + VV +   ++  + L    +F+
Sbjct: 206 AAFGFLVALMGCYYGMNSGRGAQGVGRATKSAVVAASVAILASNYLLTEVFFS 258


>gi|89898182|ref|YP_515292.1| ABC transporter [Chlamydophila felis Fe/C-56]
 gi|89331554|dbj|BAE81147.1| ABC transporter [Chlamydophila felis Fe/C-56]
          Length = 261

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 115/228 (50%), Gaps = 3/228 (1%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
           S+K K  L S   Q Y +GV+ +PVV+L   VTG V+A Q  +QL   G    +I    +
Sbjct: 35  SWK-KSLLRSTSMQGYDIGVASLPVVMLTGAVTGIVLALQSYYQLGIHGLSC-AIGFFVV 92

Query: 206 LQ-LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264
              L EIG +LTA+ ++GR G AI A +G+M++ E++ A+ T+G++ +     PRI A I
Sbjct: 93  KSILVEIGPVLTALALSGRVGGAISAFLGTMRMTEQVSAMETLGVNPLEYFALPRIIAGI 152

Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI 324
           I++P L I A ++ I    ++    + +P  V+         +++I   ++K+      I
Sbjct: 153 IAMPALVIAAVWAGIFCGYLLCRCAFQLPAHVYLHMVSGNVLISDIVMVIVKSLVFGFII 212

Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
             +A  +G         + K  T  VV S   ++  + +   F+  +G
Sbjct: 213 TSLACYQGLGKHCRIMDVAKVTTAGVVTSYISILFANCVITTFFHLLG 260


>gi|255549070|ref|XP_002515591.1| Inner membrane protein yrbE, putative [Ricinus communis]
 gi|223545535|gb|EEF47040.1| Inner membrane protein yrbE, putative [Ricinus communis]
          Length = 350

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 109/212 (51%), Gaps = 2/212 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           ++Q+  VG   V V +L S   G     Q   + ++ G +     ++++   RE+  ++T
Sbjct: 127 LQQLERVGPKSVGVCLLTSAFVGMAFTIQFVREFTKLGLQRSVGGVLALAFSRELSPVVT 186

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           ++++AGR GSA  AE+G+M+++E+ D +R +G + V  L++PR+ A  ++LPLLT++   
Sbjct: 187 SIVVAGRIGSAYAAELGTMQVSEQTDTLRVLGTNPVDYLVTPRVIASCVALPLLTLMCFT 246

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
             +  ++I+    + +   +            +I + +IK+      I IV+   G    
Sbjct: 247 VGLASSAILADGVFGVSINIILDSAQRVLKSWDIISAMIKSQVFGAIISIVSCAWGVTTS 306

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
             +  +G+  T+ VV S+  + I D  FA+ Y
Sbjct: 307 GGAKGVGESTTSAVVISLVGIFIAD--FALSY 336


>gi|206890031|ref|YP_002249467.1| toluene tolerance protein Ttg2B [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206741969|gb|ACI21026.1| toluene tolerance protein Ttg2B [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 258

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 112/218 (51%), Gaps = 1/218 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           ++ QM Y G S V +V L+    G  ++ Q + +LS  G ++++  ++ I  +REIG L+
Sbjct: 38  IVEQMEYAGSSSVFIVSLVCLFVGMALSLQLSAELSGLGLKMYTGKIVGIAVIREIGPLV 97

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++  GR G+   AEIGSM +  +ID +R  G+D ++ ++ PR+ A ++ LP LTI+ +
Sbjct: 98  TALVFIGRVGAGQTAEIGSMILGHQIDTLRVYGIDPIKKVVVPRVVASVVMLPCLTIIGD 157

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              + G   +     +   + ++S      T  N+ +G IK       I  ++   G   
Sbjct: 158 LVCLFGGYYIAVFVSNQSGSFYWSSIIKELTFQNVLSGSIKPFIFGYLISCISCFYGLTT 217

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID-SLFAIFYFAIG 372
              +  L    T  VV SI +VI +D  L  I  +A+G
Sbjct: 218 RGGAKGLRTSTTKAVVTSIVVVIAMDFVLTRILLYALG 255


>gi|119356498|ref|YP_911142.1| hypothetical protein Cpha266_0663 [Chlorobium phaeobacteroides DSM
           266]
 gi|119353847|gb|ABL64718.1| protein of unknown function DUF140 [Chlorobium phaeobacteroides DSM
           266]
          Length = 264

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 115/215 (53%), Gaps = 2/215 (0%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           K K +    + Q    G   +P+V++ +   G+++A +    L  FGA+       SI  
Sbjct: 40  KIKRYWRDFLDQATICGTDSIPIVLVSAISIGSLLAIEVGNLLEDFGAKTMLGRSTSISV 99

Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR-IWALIIS 266
           +RE+G LL  +M++ R G+   AE+G+M+I+E+IDA+R  G D V  L+ PR I AL++ 
Sbjct: 100 IRELGPLLMGLMLSARFGARNGAELGAMQISEQIDALRAFGTDPVAKLVMPRLIAALVMF 159

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326
           LP LT L++F+ +  A+ +   Y+ +   +F++  +      +   G +KAP  A  I +
Sbjct: 160 LP-LTALSDFAGLHSAAYMAEHYHRLDPGMFWNAVYPRLAPKDFVVGFVKAPVFAIIITL 218

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           V+   GF+    +  +G+     +V S  +V++ +
Sbjct: 219 VSSFNGFSARGGTAGVGRSTIKGIVVSSGLVLVAN 253


>gi|297518302|ref|ZP_06936688.1| toluene ABC transporter, permease protein [Escherichia coli OP50]
          Length = 174

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 57/172 (33%), Positives = 94/172 (54%), Gaps = 5/172 (2%)

Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261
           L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+  E++ ++  M +D +R +ISPR W
Sbjct: 4   LVALSLLRELGPVVAALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFW 63

Query: 262 ALIISLPLLTILANFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAP 318
           A +ISLPLLT++     I G S+  V WK  D  F  F+S   +      ++   LIK+ 
Sbjct: 64  AGVISLPLLTVIFVAVGIWGGSLVGVSWKGIDSGF--FWSAMQNAVDWRMDLVNCLIKSV 121

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             A  +  +++  G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 122 VFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 173


>gi|297191126|ref|ZP_06908524.1| ABC transporter integral membrane protein [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|197721750|gb|EDY65658.1| ABC transporter integral membrane protein [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 256

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 105/215 (48%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I+Q ++V    +    L+S   GAVIA Q      Q GA+ FS     +  LRE   ++T
Sbjct: 37  IQQAWFVASVTILPTALVSIPFGAVIALQIGSLTRQLGAQSFSGAASVLAVLREASPIVT 96

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++IAG  G+AI A++G+ KI EEIDA+R +G+D +  L+ PR+ A ++   LL  L + 
Sbjct: 97  ALLIAGAGGTAICADLGARKIREEIDAMRVLGIDPIHRLVVPRVLATMLVAVLLNGLVSV 156

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
             + G         +     + + F + A L++++   +KA        IVA  +G    
Sbjct: 157 VGVAGGYFFNVVLQNGTPGAYLASFTTLAQLSDLWAAELKALVFGAIAAIVASYKGLTAK 216

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
                +G  V   VV +  ++ + + +    YF I
Sbjct: 217 GGPKGVGDAVNQSVVITFMLLFVTNFVMTAVYFQI 251


>gi|149202595|ref|ZP_01879567.1| ABC transporter, inner membrane subunit [Roseovarius sp. TM1035]
 gi|149143877|gb|EDM31911.1| ABC transporter, inner membrane subunit [Roseovarius sp. TM1035]
          Length = 261

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 120/254 (47%), Gaps = 17/254 (6%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           +I  F  D+ SQ                  + F+ FL +L++    +G   +PVV + + 
Sbjct: 24  RIALFAADTISQ-------------LARPPFYFREFLHALVQ----IGWLSLPVVGMTAL 66

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
            TG  +A Q     ++F AE     +++I   RE+G +L  +M+A R  S+I AEIG+MK
Sbjct: 67  FTGGALALQIYAGGARFNAETVVPSIVAIGLTRELGPVLGGLMVAARVASSIAAEIGTMK 126

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           + E+IDA+ T+  + ++ L  PR+ A  +++P+L  + +   I+G  +V     D   A 
Sbjct: 127 VTEQIDALTTLSTNPMKYLTLPRVLAATLAVPVLVGVGDVLGIMGGFLVGVGRLDFSAAT 186

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +           ++ +GLIK       + ++    G   G  +  +G+   + VV +  +
Sbjct: 187 YLHNTIDFLETWDVVSGLIKGAAFGFIVALMGCYYGMNSGRGAQGVGRATKSAVVAASVL 246

Query: 357 VIIIDSLFAIFYFA 370
           ++  + L    +FA
Sbjct: 247 ILASNYLLTELFFA 260


>gi|124515845|gb|EAY57354.1| probable ABC transporter, permease [Leptospirillum rubarum]
          Length = 251

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 107/209 (51%), Gaps = 15/209 (7%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           QM  +GV  +P+V L S   G  +A Q    ++ +GA      +++   +R++G +L ++
Sbjct: 34  QMDRIGVGSIPIVFLASIFAGLDMALQFEVVMAPYGARALLGKVVTTSIIRDMGPVLASL 93

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           +++ R  + I +E+G M   ++IDA+R MG+D +  L++PRI+A I+ +P+L+I  +F A
Sbjct: 94  VMSARVTAGISSELGMMNSTQQIDALRVMGVDPLDRLVAPRIFAGIVMMPILSISGDFLA 153

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF-------MACAIGIVAMKE 331
           ++    +      +P  +F+S      T  N+    +K  F       + C  G+ +   
Sbjct: 154 LLAGLGISMAVGHVPAPLFWSGVRDALTAQNLTDAFLKPLFFGFILTSIGCYYGMKSASG 213

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIII 360
            F VG        K TT  V S +I I++
Sbjct: 214 AFGVG--------KSTTKAVVSAAIWILV 234


>gi|329913017|ref|ZP_08275865.1| putative transport protein (ABC superfamily, membrane)
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327545454|gb|EGF30661.1| putative transport protein (ABC superfamily, membrane)
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 258

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 116/212 (54%), Gaps = 1/212 (0%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           Q+++VG   + ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA+
Sbjct: 46  QIHFVGNYSLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTAL 105

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           + AGR+G+++ AEIG MK  E++ A+  M +D ++ +++PR WA +I++P+L  + +   
Sbjct: 106 LFAGRAGTSLTAEIGLMKAGEQLSAMEMMAVDPIQRVLAPRFWAGVIAMPVLAAIFSAVG 165

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           I+G  +V  +   I    F+S+      +  +I  G++K+     A+  +A+ +G+    
Sbjct: 166 IVGGYVVGVQMIGIDEGAFWSQMQGGVDVWQDIANGVLKSFVFGIAVTFIALFQGYEAQP 225

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               + +  T  VV     V+ +D L     F
Sbjct: 226 TPEGVARATTRTVVIGSLTVLWLDFLMTALMF 257


>gi|206602089|gb|EDZ38571.1| Probable ABC transporter, permease [Leptospirillum sp. Group II
           '5-way CG']
          Length = 251

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 107/209 (51%), Gaps = 15/209 (7%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           QM  +GV  +P+V L S   G  +A Q    ++ +GA      +++   +R++G +L ++
Sbjct: 34  QMDRIGVGSIPIVFLASIFAGLDMALQFEVVMAPYGARALLGKVVTTSIIRDMGPVLASL 93

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           +++ R  + I +E+G M   ++IDA+R MG+D +  L++PRI+A I+ +P+L+I  +F A
Sbjct: 94  VMSARVTAGISSELGMMNSTQQIDALRVMGVDPLDRLVAPRIFAGIVMMPILSISGDFLA 153

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF-------MACAIGIVAMKE 331
           ++    +      +P  +F+S      T  N+    +K  F       + C  G+ +   
Sbjct: 154 LLAGLGISMAVGHVPAPLFWSGVRDALTAQNLTDAFLKPLFFGFILTSIGCYYGMKSASG 213

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIII 360
            F VG        K TT  V S +I I++
Sbjct: 214 AFGVG--------KSTTKAVVSAAIWILV 234


>gi|83952043|ref|ZP_00960775.1| ABC transporter, inner membrane subunit [Roseovarius nubinhibens
           ISM]
 gi|83837049|gb|EAP76346.1| ABC transporter, inner membrane subunit [Roseovarius nubinhibens
           ISM]
          Length = 261

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 10/225 (4%)

Query: 156 LIRQMYY----------VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
           LIR  +Y          +G   +PVV + +  TG  +A Q     ++F AE     +++I
Sbjct: 36  LIRPPFYGREFGAALIQIGWLSLPVVGMTALFTGGALALQIYAGGARFNAETVVPSIVAI 95

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
              RE+G +L  +M+A R  S+I AEIG+MK+ E+IDA+ T+  + ++ L  PR+ A  +
Sbjct: 96  GLTRELGPVLGGLMVAARVASSIAAEIGTMKVTEQIDALTTLSTNPMKYLTLPRVLAATL 155

Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325
           ++P+L  + +   I+G  +V     D   A +        TL ++ +GLIK       + 
Sbjct: 156 AVPVLVGVGDVLGIMGGFLVGVGRLDFGAATYLHNTLDFLTLWDVTSGLIKGAVFGFLVA 215

Query: 326 IVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           ++    G   G  +  +G+   + VV +  +++  + L    +F+
Sbjct: 216 LMGCYFGMNSGRGAQGVGRATKSAVVAASVLILASNYLLTELFFS 260


>gi|167564342|ref|ZP_02357258.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           oklahomensis EO147]
 gi|167571490|ref|ZP_02364364.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           oklahomensis C6786]
          Length = 255

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 118/214 (55%), Gaps = 1/214 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +Q++++G     ++ +     G V+  QG + L+++G+E     L+++  +RE+G +++A
Sbjct: 42  KQVHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVSA 101

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+++ AEIG MK  E++ A+  M +D ++ +I+PR+WA +I++PLL  + +  
Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPLKNVIAPRMWAGVIAMPLLAAIFSAV 161

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            ++G  +V      +    F+S+      + A++  G++K+     A+  +A+ +G+   
Sbjct: 162 GVLGGYVVGVLLIGVDPGAFWSQMQGGVEVWADVGNGVLKSVVFGFAVTFIALFQGYEAK 221

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                +    T  VV +   V+ +D L     F+
Sbjct: 222 PTPEGVSHATTKTVVYASLAVLGLDFLLTALMFS 255


>gi|298491186|ref|YP_003721363.1| hypothetical protein Aazo_2257 ['Nostoc azollae' 0708]
 gi|298233104|gb|ADI64240.1| protein of unknown function DUF140 ['Nostoc azollae' 0708]
          Length = 265

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 108/203 (53%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + Q+  VG   + + +L +   GAV   Q A +   FGA      ++++   RE+  +LT
Sbjct: 42  LEQLAAVGPDSLFIALLTAVFVGAVFTIQVAREFINFGAGNLVGGVLAVALTRELTPVLT 101

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV++AGR GSA  AEIG+M++ E+IDA+  +  D +  L+ PRI A ++ LP+LT+L+  
Sbjct: 102 AVILAGRVGSAFAAEIGTMRVTEQIDALLILKTDPIDYLVIPRIIACLLMLPILTLLSLL 161

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           + + G  I+    Y++   VF     +   + +I + +IKA      I I+    G    
Sbjct: 162 AGMFGGLIIATHIYNLSDTVFLDSARNFLDIWDICSAMIKAGCFGVLIAIIGCSWGLTTT 221

Query: 337 VHSNSLGKKVTTCVVQSISIVII 359
             +  +G+  TT VV ++ I+ I
Sbjct: 222 GGAKGVGQSTTTAVVTALLIIFI 244


>gi|167645542|ref|YP_001683205.1| hypothetical protein Caul_1577 [Caulobacter sp. K31]
 gi|167347972|gb|ABZ70707.1| protein of unknown function DUF140 [Caulobacter sp. K31]
          Length = 268

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 109/210 (51%)

Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211
           F    +RQ+  +G   +PVV L +  TGA +         +F AE     ++++   RE+
Sbjct: 49  FASQFLRQLVAIGFFSLPVVGLTAIFTGAALGLNIYTGGGRFNAEQVMPQIVALGITREL 108

Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271
           G +L A+M+AGR  +AI AEIG+M+  E+IDA+RT+  D  R L++PR+ A  + LPLLT
Sbjct: 109 GPVLAALMLAGRVSAAIAAEIGAMRATEQIDAMRTLSTDPFRYLVAPRLLAATLVLPLLT 168

Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
           ++A+   + G  +V  +  D    V+     +     ++ +GLIKA      + ++    
Sbjct: 169 LVADVIGVAGGWLVAVRILDFNSTVYIRNTANFIQGWDVGSGLIKAAVFGFIVALMGCYH 228

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           G+     +  +G+  T  VV S  ++   D
Sbjct: 229 GYNAKGGARGVGRATTHAVVSSAILIFASD 258


>gi|255070247|ref|XP_002507205.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
 gi|226522480|gb|ACO68463.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
          Length = 297

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 119/217 (54%), Gaps = 8/217 (3%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           ++Q+  VG   + V +L S   G V   Q   + S+ G       L+ +   RE+  ++ 
Sbjct: 83  LQQISRVGPDTLGVSMLTSSFVGMVFTIQFCKEFSKVGLTRVIGGLLGLAFTRELTPVIC 142

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A+++AGR GSA+ AE+G+M+++E++D +RT+G D V  L++PR+ A  +SLP+L+++ +F
Sbjct: 143 AIVLAGRVGSAVAAELGTMQVSEQVDQLRTLGSDPVDYLVAPRVVACAVSLPILSVI-SF 201

Query: 277 SAIIGASIVIW--KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMA--CAIGIVAMKEG 332
           +  + ASI++   +Y   P A+  S   +   L +   G++ A   A    I I++   G
Sbjct: 202 TIGMAASILLADIRYGISPNAIVDS---AAKYLESFDVGVMCAKGFAFGSVISIISCGWG 258

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
                 +  +G+  T  VV S+  + ++D   ++F+F
Sbjct: 259 QTTTGGAKGVGESTTASVVISLVAIFVVDFFLSMFFF 295


>gi|329114428|ref|ZP_08243190.1| Putative ABC transporter permease protein [Acetobacter pomorum
           DM001]
 gi|326696504|gb|EGE48183.1| Putative ABC transporter permease protein [Acetobacter pomorum
           DM001]
          Length = 321

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 98/172 (56%), Gaps = 12/172 (6%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +PVV L +  +G VIA Q     +Q+ A+     ++ +   RE+G +L  +M+AGR G+A
Sbjct: 118 LPVVALTALFSGGVIALQSYTGFAQYHAQSAIAGIVVLAVTRELGPVLAGLMVAGRVGAA 177

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA-SIVI 286
           + A+IG+M++ ++IDA+ T+  + ++ L++PR+ A +I+LPLL ++A+   + G  ++ +
Sbjct: 178 MAAQIGTMRVTDQIDALTTLSTNPMKYLVAPRLLAGLIALPLLVLVADILGVAGGFTVAV 237

Query: 287 WKYYDIPFAVFFSRFHSTATLA-----NIFTGLIKAPFMACAIGIVAMKEGF 333
            K        F +  + TATL      ++  GL+KA      I ++    G+
Sbjct: 238 VKLG------FSAPAYITATLNSLKAIDVTVGLVKAALFGFLIALMGCYYGY 283


>gi|73666683|ref|YP_302699.1| hypothetical protein Ecaj_0050 [Ehrlichia canis str. Jake]
 gi|72393824|gb|AAZ68101.1| protein of unknown function DUF140 [Ehrlichia canis str. Jake]
          Length = 265

 Score = 82.4 bits (202), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 125/262 (47%), Gaps = 22/262 (8%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           NL ++IG   V F+   C+               C     + G +     ++++  +   
Sbjct: 23  NLIFNIGHSFVFFVKFVCN---------------CFMPPYYYGVIFKQFIEIFFFSL--- 64

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
           P+V + +  TGAV+  Q +  +    +  F   ++ +  +RE+G +L  ++IAGR G+AI
Sbjct: 65  PIVGITAIFTGAVLILQNSLIIHNNVSGDFVSGVVVVAIVRELGPVLIGLIIAGRVGAAI 124

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG+M+I E+IDA+ T+  +  + LI PRI + +I++PLL + A+     G  IV   
Sbjct: 125 AAEIGTMRITEQIDALFTLDTNPFKYLIVPRIISAMIAMPLLILCADLIGAYGGYIV--G 182

Query: 289 YYDIPFA--VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
            Y + +   ++         + ++  GLIKA      I  +    G+     +  +G   
Sbjct: 183 SYQLGYTPEIYVRGIMKFLHVKDVILGLIKATVFGFIISFMGCYSGYYCSGGARGVGMAT 242

Query: 347 TTCVVQSISIVIIIDSLFAIFY 368
           T  VV S   +I+++ +  +FY
Sbjct: 243 TYVVVVSSMFIILLNYVITVFY 264


>gi|313682719|ref|YP_004060457.1| hypothetical protein Sulku_1596 [Sulfuricurvum kujiense DSM 16994]
 gi|313155579|gb|ADR34257.1| protein of unknown function DUF140 [Sulfuricurvum kujiense DSM
           16994]
          Length = 264

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 102/199 (51%), Gaps = 4/199 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           ++ Q+  +G+  + V+ L +  TG V A Q      QFGAE F+   +     RE+G + 
Sbjct: 47  VLTQIEVIGLGCMGVITLTALFTGMVEAIQLYNGFHQFGAENFTGYTIFYSISRELGPVF 106

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            ++M+  RS SA+ AE+G+M+++E+IDAI  +G++    LI+PRI A +ISLPLL I  +
Sbjct: 107 ASLMLISRSISAMAAELGTMRVSEQIDAIDILGVNSKEYLITPRIIATVISLPLLVIWFD 166

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
           F A+  A  +      I    +           +I TG+IK    A   G +    G  +
Sbjct: 167 FIAVGSAYFISIGVLGINPVAYQDTLMRLGEFEDIMTGVIK----AAVFGFIVSSIGSYI 222

Query: 336 GVHSNSLGKKVTTCVVQSI 354
           G H++   + V    + ++
Sbjct: 223 GYHTSGGARGVGQSTIYAV 241


>gi|227206406|dbj|BAH57258.1| AT1G19800 [Arabidopsis thaliana]
          Length = 201

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 88/161 (54%)

Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268
           RE+  ++T++++AGR GSA  AE+G+M+++E+ D +R +G D +  LI+PR+ A  ++LP
Sbjct: 30  RELSPVITSIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADPIDYLITPRVIASCLALP 89

Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328
            LT++     +  ++++    Y I   +     H      +I + +IK+      I +++
Sbjct: 90  FLTLMCFTVGMASSALLSDAVYGISINIIMDSAHRALRPWDIVSAMIKSQVFGAIISVIS 149

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              G      +  +G+  T+ VV S+  + I D + + F+F
Sbjct: 150 CSWGVTTTGGAKGVGESTTSAVVMSLVGIFIADFVLSSFFF 190


>gi|15837022|ref|NP_297710.1| toluene tolerance protein [Xylella fastidiosa 9a5c]
 gi|9105260|gb|AAF83230.1|AE003893_7 toluene tolerance protein [Xylella fastidiosa 9a5c]
          Length = 249

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 74/127 (58%)

Query: 145 SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204
           SS   + F   LIR++Y +G   +P++ +     G V+  QG   L+ +GA      L+ 
Sbjct: 23  SSLPTRDFFAELIREIYKIGARSLPIIAVGGAFVGLVLTLQGYRTLTLYGASDALSTLLG 82

Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264
           +   RE+  +LTA++  GR+GS++ AE+  M+  ++I A+  M +D +   ++PR WA I
Sbjct: 83  LSLYRELAPVLTALLFIGRAGSSVAAELSLMRATDQIKALELMAIDPIAKAVAPRFWAAI 142

Query: 265 ISLPLLT 271
           +++PLLT
Sbjct: 143 LTVPLLT 149


>gi|302551013|ref|ZP_07303355.1| ABC transporter integral membrane protein [Streptomyces
           viridochromogenes DSM 40736]
 gi|302468631|gb|EFL31724.1| ABC transporter integral membrane protein [Streptomyces
           viridochromogenes DSM 40736]
          Length = 256

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 106/215 (49%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I+Q ++V    +    L+S   GAVIA Q      Q GA+ FS     +  LRE   ++T
Sbjct: 37  IQQAWFVASVTIMPTALVSIPFGAVIALQIGSLTRQLGAQSFSGAASVLAVLREASPIVT 96

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++IAG  G+AI A++G+ KI +EIDA++ +G+D V  L+ PR+ A ++   LL  L + 
Sbjct: 97  ALLIAGAGGTAICADLGARKIRDEIDAMQVLGIDPVHRLVVPRVLASMLVAVLLNGLVSV 156

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
             + G         +     + + F + A L++++   +KA       GIVA  +G    
Sbjct: 157 VGVAGGYFFNVVLQNGTPGAYLASFTTLAQLSDLWAAEVKALVFGAIAGIVASYKGLTAK 216

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
                +G  V   VV +  ++ + + +    YF +
Sbjct: 217 GGPKGVGDAVNQSVVITFMLLFVTNFVMTAVYFQV 251


>gi|259416059|ref|ZP_05739979.1| membrane protein [Silicibacter sp. TrichCH4B]
 gi|259347498|gb|EEW59275.1| membrane protein [Silicibacter sp. TrichCH4B]
          Length = 260

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 106/200 (53%), Gaps = 7/200 (3%)

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           VG   +PVV L +  TG  +A Q     ++F AE     +++I  +RE+G +L  +MIA 
Sbjct: 52  VGWLSLPVVALTAIFTGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAA 111

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           R  S+I AEI +MK+ E+IDA+ T+  + ++ L++PR+ A +I++P+L  + +   I+G 
Sbjct: 112 RVTSSIAAEIATMKVTEQIDALVTLSTNPMKYLVAPRVLAALITVPVLVGVGDIIGIMGG 171

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
            +V  +  D   A +         L +I + L+K      A G +A   G   G+ S   
Sbjct: 172 YVVATETLDFNAAAYLKNTVDFLELRDIVSSLVK----GAAFGTIAALMGCYYGMQSGRG 227

Query: 343 GK---KVTTCVVQSISIVII 359
            +   + T   V++ +++I+
Sbjct: 228 AQGVGRATKGSVEAAAVLIL 247


>gi|237708018|ref|ZP_04538499.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|237725290|ref|ZP_04555771.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|265754195|ref|ZP_06089384.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|229436556|gb|EEO46633.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
 gi|229458004|gb|EEO63725.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|263234904|gb|EEZ20459.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 251

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 117/234 (50%), Gaps = 20/234 (8%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G   A   + + F    + +M  +GV+ + +V+LISF  GAVI  Q    +       F 
Sbjct: 20  GRTFARPERMRMFFKQYLNEMVQLGVNSIGIVLLISFFIGAVITIQIKLNIESPWMPRFV 79

Query: 200 IDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
           +   +    REI +L     +  +++AG+ GS I +EIG+M++ ++IDA+  MG++    
Sbjct: 80  VGYTT----REIMLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALEIMGVNSAGY 135

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAVFFSRFHSTATLAN 309
           LI P+I AL+  +P L I + FS IIGA    W        D+ + + +S F        
Sbjct: 136 LILPKIIALMTMIPFLVIFSIFSGIIGAFCTCWFGGVMNAEDLAYGLQYS-FQEWF---- 190

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
           ++   IK+ F A  I  V+   G+ V   S ++GK  T  VV S S++I+   L
Sbjct: 191 VWCSFIKSIFFAFIISSVSAYFGYTVEGGSIAVGKASTDSVVMS-SVLILFSDL 243


>gi|150009005|ref|YP_001303748.1| ABC transporter permease [Parabacteroides distasonis ATCC 8503]
 gi|256840994|ref|ZP_05546501.1| ABC transporter permease [Parabacteroides sp. D13]
 gi|262383895|ref|ZP_06077031.1| ABC transporter permease [Bacteroides sp. 2_1_33B]
 gi|298375763|ref|ZP_06985719.1| membrane protein [Bacteroides sp. 3_1_19]
 gi|301312055|ref|ZP_07217977.1| putative membrane protein [Bacteroides sp. 20_3]
 gi|149937429|gb|ABR44126.1| conserved hypothetical protein, putative ABC transporter permease
           protein [Parabacteroides distasonis ATCC 8503]
 gi|256736837|gb|EEU50164.1| ABC transporter permease [Parabacteroides sp. D13]
 gi|262294793|gb|EEY82725.1| ABC transporter permease [Bacteroides sp. 2_1_33B]
 gi|298266800|gb|EFI08457.1| membrane protein [Bacteroides sp. 3_1_19]
 gi|300830157|gb|EFK60805.1| putative membrane protein [Bacteroides sp. 20_3]
          Length = 248

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 24/227 (10%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           ++  F   LI+++Y +GV  + +VI+IS   G VIA Q +  +S      F+I   +   
Sbjct: 24  RWSMFFKQLIKEIYKLGVDSLWIVIIISVFIGTVIAIQISLNISSPLIPKFTIGYTT--- 80

Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
            REI +L     + A+++AG+ GS I +EIG+M++ E+IDA+  MG++    LI P++  
Sbjct: 81  -REIILLEFSSSIMALILAGKVGSNIASEIGTMRVTEQIDAMEIMGVNSANFLILPKMLG 139

Query: 263 LIISLPLLTILANFSAIIGASIVIWKY--------YDIPFAVFFSRFHSTATLANIFTGL 314
           L+I +P+L I + F+ I+G     +          ++     +F+ F+       I+  +
Sbjct: 140 LMIFIPVLVIFSMFTGIMGGIFASYSTSTGMTPSSFEYGLQFYFNEFY-------IWYSI 192

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           IK+   A  I  +A   G+ V   +  +GK  T  VV S  ++++ D
Sbjct: 193 IKSVVYAFIISSIAAYFGYNVKGGALEVGKASTNAVVMSSIMILLAD 239


>gi|224535957|ref|ZP_03676496.1| hypothetical protein BACCELL_00821 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522412|gb|EEF91517.1| hypothetical protein BACCELL_00821 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 247

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 121/243 (49%), Gaps = 25/243 (10%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G  I   G   A   + + F    I +M  +GV+ + +V+LISF  GAVI  Q    + 
Sbjct: 8   VGRYIMLMGRTFARPERMRMFFRQYINEMGQLGVNSIGIVLLISFFIGAVITIQIKLNIE 67

Query: 192 QFGAEIFSIDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
                 +++  ++    REI +L     +  +++AG+ GS I +E+G+M++ ++IDA+  
Sbjct: 68  SPFMPRWTVGYVT----REIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEI 123

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAV---FF 298
           MG++    LI P+I+A++ ++P L   + F+ IIGA    W        D+ + +   F 
Sbjct: 124 MGVNSANYLILPKIFAMVTTIPFLVTFSIFAGIIGAFATCWFGGIMSAVDLEYGLQYMFV 183

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
             F        I+ G+IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++
Sbjct: 184 EWF--------IWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLIL 235

Query: 359 IID 361
             D
Sbjct: 236 FAD 238


>gi|258541792|ref|YP_003187225.1| ABC transporter permease [Acetobacter pasteurianus IFO 3283-01]
 gi|256632870|dbj|BAH98845.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-01]
 gi|256635927|dbj|BAI01896.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-03]
 gi|256638982|dbj|BAI04944.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-07]
 gi|256642036|dbj|BAI07991.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-22]
 gi|256645091|dbj|BAI11039.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-26]
 gi|256648146|dbj|BAI14087.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-32]
 gi|256651199|dbj|BAI17133.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256654190|dbj|BAI20117.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-12]
          Length = 261

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 98/172 (56%), Gaps = 12/172 (6%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +PVV L +  +G VIA Q     +Q+ A+     ++ +   RE+G +L  +M+AGR G+A
Sbjct: 58  LPVVALTALFSGGVIALQSYTGFAQYHAQSAIAGIVVLAVTRELGPVLAGLMVAGRVGAA 117

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA-SIVI 286
           + A+IG+M++ ++IDA+ T+  + ++ L++PR+ A +I+LPLL ++A+   + G  ++ +
Sbjct: 118 MAAQIGTMRVTDQIDALTTLSTNPMKYLVAPRLLAGLIALPLLVLVADILGVAGGFTVAV 177

Query: 287 WKYYDIPFAVFFSRFHSTATLA-----NIFTGLIKAPFMACAIGIVAMKEGF 333
            K        F +  + TATL      ++  GL+KA      I ++    G+
Sbjct: 178 VKLG------FSAPAYITATLNSLKAIDVTVGLVKAALFGFLIALMGCYYGY 223


>gi|148240268|ref|YP_001225655.1| ABC-type transport system, permease component [Synechococcus sp. WH
           7803]
 gi|147848807|emb|CAK24358.1| ABC-type transport system, permease component [Synechococcus sp. WH
           7803]
          Length = 257

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 109/230 (47%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G+   ++ + +   + L+ Q+   G     +VI+ S   G V   Q   +LS  GA+   
Sbjct: 27  GQAVTATARGRINTVDLLDQLQEAGPGSFLIVIITSLAAGTVFNIQVTKELSSMGADATV 86

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
             ++++   REI  LLTA ++ G+  +A  A++G+MK+ E+IDAI  +  D V  L+ PR
Sbjct: 87  GGVLAVGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTDPVEYLVVPR 146

Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319
           + A+++  P+  +L    AI  A I   + Y IP  VF+    S     +I   LIKA  
Sbjct: 147 LIAMVVMAPVQCLLFFGVAIWSAQISSTELYAIPPEVFWMSVRSWLLPDDIPFMLIKALV 206

Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               I +++   G         +G   T  VV  +  V ++D++     F
Sbjct: 207 FGLQIAVLSCGWGMTTQGGPKEVGTSTTGAVVMILVTVALMDTVLTQILF 256


>gi|28199532|ref|NP_779846.1| toluene tolerance protein [Xylella fastidiosa Temecula1]
 gi|71274637|ref|ZP_00650925.1| Protein of unknown function DUF140 [Xylella fastidiosa Dixon]
 gi|71899306|ref|ZP_00681467.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1]
 gi|71899651|ref|ZP_00681805.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1]
 gi|170730903|ref|YP_001776336.1| toluene tolerance protein [Xylella fastidiosa M12]
 gi|182682267|ref|YP_001830427.1| hypothetical protein XfasM23_1749 [Xylella fastidiosa M23]
 gi|28057647|gb|AAO29495.1| toluene tolerance protein [Xylella fastidiosa Temecula1]
 gi|71164369|gb|EAO14083.1| Protein of unknown function DUF140 [Xylella fastidiosa Dixon]
 gi|71730603|gb|EAO32680.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1]
 gi|71730932|gb|EAO33002.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1]
 gi|167965696|gb|ACA12706.1| toluene tolerance protein [Xylella fastidiosa M12]
 gi|182632377|gb|ACB93153.1| protein of unknown function DUF140 [Xylella fastidiosa M23]
 gi|307578543|gb|ADN62512.1| hypothetical protein XFLM_02565 [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 249

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 74/127 (58%)

Query: 145 SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204
           SS   + F   LIR++Y +G   +P++ +     G V+  QG   L+ +GA      L+ 
Sbjct: 23  SSLPTRDFFAELIREIYKIGARSLPIIAVGGAFVGLVLTLQGYRTLTLYGASDALSTLLG 82

Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264
           +   RE+  +LTA++  GR+GS++ AE+  M+  ++I A+  M +D +   ++PR WA +
Sbjct: 83  LSLYRELAPVLTALLFIGRAGSSVAAELSLMRATDQIKALELMAIDPIAKAVAPRFWAAV 142

Query: 265 ISLPLLT 271
           +++PLLT
Sbjct: 143 LTVPLLT 149


>gi|110596847|ref|ZP_01385137.1| Protein of unknown function DUF140 [Chlorobium ferrooxidans DSM
           13031]
 gi|110341534|gb|EAT59994.1| Protein of unknown function DUF140 [Chlorobium ferrooxidans DSM
           13031]
          Length = 264

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 113/208 (54%), Gaps = 2/208 (0%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
            ++ Q    G   +P+V++ +   GA++A +    L  FGA+       ++  +RE+G L
Sbjct: 47  DVLDQATICGTDSIPIVLVSAISIGALLAIEVGNLLEDFGAKTMLGRSTALSVIRELGPL 106

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR-IWALIISLPLLTIL 273
           L  +M++ R GS   AE+G+M+I+E+IDA+R  G D +  L+ PR + ALI+ LP LT L
Sbjct: 107 LMGLMLSARFGSRNGAELGAMQISEQIDALRAFGTDPIAKLVMPRLVAALIMFLP-LTAL 165

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
           ++F+ +  A+ +   Y+ I   +F++  +      +   G +KAP  A  I +V+   GF
Sbjct: 166 SDFAGLQSAAYMAEHYHRIDPGIFWNAVYPRLAPKDFVVGFLKAPVFAVIITLVSSFNGF 225

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIID 361
           +    +  +G+     +V S  +V+I +
Sbjct: 226 SARGGTAGVGRATIKGIVVSSGLVLIAN 253


>gi|116789794|gb|ABK25388.1| unknown [Picea sitchensis]
          Length = 462

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 118/231 (51%), Gaps = 2/231 (0%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G+  A  +K K    + ++Q+  VG     V +L +   G     Q   + ++ G     
Sbjct: 221 GQVIARVFKGKIHTRNTLQQLEVVGPGSSGVCLLTAAFVGMAFTIQFVREFTRLGLTRSV 280

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
             ++++   RE+  ++T+++IAGR GSA  AE+G+M+++E+ D +R +G D V  LI PR
Sbjct: 281 GGVLALAFSRELSPVVTSIIIAGRVGSAFAAELGTMQVSEQTDTLRVLGTDPVDYLIIPR 340

Query: 260 IWALIISLPLLTILANFSAIIGASIVIWK-YYDIPFAVFFSRFHSTATLANIFTGLIKAP 318
           + A  ++LP+LT++  FS  + AS+++    Y++   +       +    +I + ++K+ 
Sbjct: 341 VIACCLALPILTLIC-FSVSLAASVLLADGVYNVSANIILESARRSLHPWDIISAMVKST 399

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
                I +++   G      +  +G+  T+ VV S+  + I D + +  +F
Sbjct: 400 VFGGLISVISCAWGVTTLGGAKGVGESTTSAVVISLVCIFIADFILSWCFF 450


>gi|255014836|ref|ZP_05286962.1| ABC transporter permease [Bacteroides sp. 2_1_7]
          Length = 241

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 24/227 (10%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           ++  F   LI+++Y +GV  + +VI+IS   G VIA Q +  +S      F+I   +   
Sbjct: 17  RWSMFFKQLIKEIYKLGVDSLWIVIIISVFIGTVIAIQISLNISSPLIPKFTIGYTT--- 73

Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
            REI +L     + A+++AG+ GS I +EIG+M++ E+IDA+  MG++    LI P++  
Sbjct: 74  -REIILLEFSSSIMALILAGKVGSNIASEIGTMRVTEQIDAMEIMGVNSANFLILPKMLG 132

Query: 263 LIISLPLLTILANFSAIIGASIVIWKY--------YDIPFAVFFSRFHSTATLANIFTGL 314
           L+I +P+L I + F+ I+G     +          ++     +F+ F+       I+  +
Sbjct: 133 LMIFIPVLVIFSMFTGIMGGIFASYSTSTGMTPSSFEYGLQFYFNEFY-------IWYSI 185

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           IK+   A  I  +A   G+ V   +  +GK  T  VV S  ++++ D
Sbjct: 186 IKSVVYAFIISSIAAYFGYNVKGGALEVGKASTNAVVMSSIMILLAD 232


>gi|212690525|ref|ZP_03298653.1| hypothetical protein BACDOR_00007 [Bacteroides dorei DSM 17855]
 gi|212666874|gb|EEB27446.1| hypothetical protein BACDOR_00007 [Bacteroides dorei DSM 17855]
          Length = 248

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 117/234 (50%), Gaps = 20/234 (8%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G   A   + + F    + +M  +GV+ + +V+LISF  GAVI  Q    +       F 
Sbjct: 17  GRTFARPERMRMFFKQYLNEMVQLGVNSIGIVLLISFFIGAVITIQIKLNIESPWMPRFV 76

Query: 200 IDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
           +   +    REI +L     +  +++AG+ GS I +EIG+M++ ++IDA+  MG++    
Sbjct: 77  VGYTT----REIMLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALEIMGVNSAGY 132

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAVFFSRFHSTATLAN 309
           LI P+I AL+  +P L I + FS IIGA    W        D+ + + +S F        
Sbjct: 133 LILPKIIALMTMIPFLVIFSIFSGIIGAFCTCWFGGVMNAEDLAYGLQYS-FQEWF---- 187

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
           ++   IK+ F A  I  V+   G+ V   S ++GK  T  VV S S++I+   L
Sbjct: 188 VWCSFIKSIFFAFIISSVSAYFGYTVEGGSIAVGKASTDSVVMS-SVLILFSDL 240


>gi|298384787|ref|ZP_06994346.1| membrane protein [Bacteroides sp. 1_1_14]
 gi|298261931|gb|EFI04796.1| membrane protein [Bacteroides sp. 1_1_14]
          Length = 247

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 116/227 (51%), Gaps = 25/227 (11%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           + + F    + +M  +GV+ + +V+LISF  GAVI  Q    +       +++  ++   
Sbjct: 24  RMRMFFRQYLNEMEQLGVNSIGIVLLISFFIGAVITIQIKLNIESPWMPRWTVGYVT--- 80

Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
            REI +L     +  +++AG+ GS I +E+G+M++ ++IDA+  MG++    LI P+I A
Sbjct: 81  -REIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGINSANYLILPKITA 139

Query: 263 LIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAV---FFSRFHSTATLANIFTGL 314
           ++  +P+L   + F+ IIGA    W        D+ + +   F   F        I+ G+
Sbjct: 140 MVTVIPVLVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQYMFVEWF--------IWAGI 191

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           IK+ F A  I  V+   G+ V   S ++GK  T  VV S  +++  D
Sbjct: 192 IKSLFFAFIIASVSAFFGYTVDGGSIAVGKASTDAVVSSSVLILFAD 238


>gi|29349246|ref|NP_812749.1| hypothetical protein BT_3838 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253573093|ref|ZP_04850484.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|29341154|gb|AAO78943.1| putative ABC transporter [Bacteroides thetaiotaomicron VPI-5482]
 gi|251837316|gb|EES65416.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 247

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 116/227 (51%), Gaps = 25/227 (11%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           + + F    + +M  +GV+ + +V+LISF  GAVI  Q    +       +++  ++   
Sbjct: 24  RMRMFFRQYLNEMEQLGVNSIGIVLLISFFIGAVITIQIKLNIESPWMPRWTVGYVT--- 80

Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
            REI +L     +  +++AG+ GS I +E+G+M++ ++IDA+  MG++    LI P+I A
Sbjct: 81  -REIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGINSANYLILPKITA 139

Query: 263 LIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAV---FFSRFHSTATLANIFTGL 314
           ++  +P+L   + F+ IIGA    W        D+ + +   F   F        I+ G+
Sbjct: 140 MVTVIPVLVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQYMFVEWF--------IWAGI 191

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           IK+ F A  I  V+   G+ V   S ++GK  T  VV S  +++  D
Sbjct: 192 IKSLFFAFIIASVSAFFGYTVDGGSIAVGKASTDAVVSSSVLILFAD 238


>gi|124026456|ref|YP_001015571.1| putative transporter, membrane component [Prochlorococcus marinus
           str. NATL1A]
 gi|123961524|gb|ABM76307.1| possible transporter, membrane component [Prochlorococcus marinus
           str. NATL1A]
          Length = 249

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 105/219 (47%), Gaps = 8/219 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI Q+   G     +V++     G V   Q A +LS+ G       L++I   REI  LL
Sbjct: 35  LIDQLMEAGPGSFLIVLITGIAAGTVFNIQVAAELSKQGLGSAVGGLLAIGMAREIAPLL 94

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL-- 273
           TA ++ G+  +A  A+IG+MK+ E+IDAI  +  D V  L+ PR+ A+++  P+  +L  
Sbjct: 95  TATLLTGKVATAYAAQIGTMKVTEQIDAITMLQTDPVEYLVVPRLCAMVVMAPIQCLLFF 154

Query: 274 --ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
             A FS    ++I+    Y IP ++F++        +++   L+KA      I I+A   
Sbjct: 155 SIALFSGQFSSTIL----YQIPPSIFWNSVREWLITSDLPFMLVKALVFGLLIAIIACGW 210

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G         +G   T  VV ++  V ++D L     F 
Sbjct: 211 GLTTRGGPKEVGSSTTGAVVMTLITVSLVDVLLTQVLFG 249


>gi|319900088|ref|YP_004159816.1| hypothetical protein Bache_0200 [Bacteroides helcogenes P 36-108]
 gi|319415119|gb|ADV42230.1| protein of unknown function DUF140 [Bacteroides helcogenes P
           36-108]
          Length = 247

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 117/232 (50%), Gaps = 19/232 (8%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G   A   + + F    + ++  +GV+ + +V+LISF  GAVI  Q    +       ++
Sbjct: 16  GRVFARPERMRMFFRQYLNEVEQLGVNSIGIVLLISFFIGAVITIQIKLNIESPFMPRWT 75

Query: 200 IDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
           +  ++    REI +L     +  +++AG+ GS I +E+G+M++ ++IDA+  MG++    
Sbjct: 76  VGYVT----REIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGVNSANY 131

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAVFFSRFHSTATLAN 309
           LI P+I AL+ ++PL+   + F+ IIGA    W        D+ + +       T     
Sbjct: 132 LILPKISALVTTIPLMVTFSIFAGIIGAFCTCWFGGIMSAVDLEYGL-----QYTFVEWF 186

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           I+ G+IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D
Sbjct: 187 IWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLILFAD 238


>gi|88807464|ref|ZP_01122976.1| possible transporter, membrane component [Synechococcus sp. WH
           7805]
 gi|88788678|gb|EAR19833.1| possible transporter, membrane component [Synechococcus sp. WH
           7805]
          Length = 257

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 108/230 (46%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G+   ++ + +   + L+ Q+   G     +VI+ S   G V   Q   +LS  GA    
Sbjct: 27  GQAVTATVRGRINTVDLLDQLQEAGPGSFLIVIITSLAAGTVFNIQVTKELSSMGASATV 86

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
             ++++   REI  LLTA ++ G+  +A  A++G+MK+ E+IDAI  +  D V  L+ PR
Sbjct: 87  GGVLAVGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTDPVEYLVVPR 146

Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319
           + A+++  P+  +L    AI  A     + Y IP  VF+S   S     +I   LIKA  
Sbjct: 147 LIAMVVMAPVQCLLFFGVAIWSAQWSSTELYMIPPQVFWSSVRSWLMPDDIPFMLIKALV 206

Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               I +++   G         +G   T  VV  +  V ++D++     F
Sbjct: 207 FGLQIAVLSCGWGMTTAGGPKEVGTSTTGAVVMILVTVALMDTVLTQLLF 256


>gi|255533344|ref|YP_003093716.1| hypothetical protein Phep_3461 [Pedobacter heparinus DSM 2366]
 gi|255346328|gb|ACU05654.1| protein of unknown function DUF140 [Pedobacter heparinus DSM 2366]
          Length = 244

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/140 (39%), Positives = 91/140 (65%), Gaps = 5/140 (3%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAE--IFSIDLMS 204
           KFK +L ++ +QM ++GV  + ++ +IS   GAV+  Q AFQL S F  +  I S++  S
Sbjct: 22  KFKIYLKAIFKQMDFIGVGSLGLIAIISTFIGAVMTLQIAFQLVSDFIPKTIIGSVNRDS 81

Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264
              + E+   ++A+++AG+ GSAI +EIG+M+++E+IDA+  MG++    LI P+I A I
Sbjct: 82  --SILELSPTISAIVLAGKIGSAISSEIGTMRVSEQIDALEIMGINSPGYLILPKIIAGI 139

Query: 265 ISLPLLTILANFSAIIGASI 284
             +PLL I++ F +I G  I
Sbjct: 140 TMVPLLVIMSMFLSITGGYI 159


>gi|319791928|ref|YP_004153568.1| hypothetical protein Varpa_1241 [Variovorax paradoxus EPS]
 gi|315594391|gb|ADU35457.1| protein of unknown function DUF140 [Variovorax paradoxus EPS]
          Length = 260

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 117/219 (53%), Gaps = 2/219 (0%)

Query: 155 SLIR-QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
           SL+R Q++++G   + ++ +     G V+  Q  + L ++G+      L+++  +RE+G 
Sbjct: 42  SLVRDQIHFLGNYSLAIIGVSGLFVGFVLGLQMYYALQRYGSSEALGLLVTLSLVRELGP 101

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           ++ A++  GR+G+++ AEIG MK +E++ A+  M +D V+ +++PR WA +I++PLL  +
Sbjct: 102 VVAALLFTGRAGTSLTAEIGLMKADEQLSAMEMMAVDPVQRILAPRFWAGVITMPLLAAV 161

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
            +   I+G  +V      +    F+ +      +  ++  G+IK+      +  +A+ +G
Sbjct: 162 FSAVGIMGGYVVGVLMLGVDPGAFWGQMQGGVDVWRDVGNGVIKSIVFGFTVTFIALLQG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           ++       + +  T  VV +   V+ +D L     F+I
Sbjct: 222 YSAQPTPEGVSRATTRTVVTASLAVLGLDFLLTAMMFSI 260


>gi|33865118|ref|NP_896677.1| transporter, membrane component [Synechococcus sp. WH 8102]
 gi|33638802|emb|CAE07097.1| possible transporter, membrane component [Synechococcus sp. WH
           8102]
          Length = 249

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 112/230 (48%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G+   ++ + +   + L  Q+   G   + +V++IS   G+V   Q A +L++ GA    
Sbjct: 18  GQAVTATLRGRINTVDLQDQLMEAGPGTLLIVLIISIAAGSVFNIQVAAELTRQGAGSTV 77

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
             +++I   REI  LLT+ ++AG+  +A  A++G+MK+ E+IDAI  +  D V  L+ PR
Sbjct: 78  GGILAIGLAREIAPLLTSCLLAGKVATAYAAQLGTMKVTEQIDAITMLRTDPVEYLVVPR 137

Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319
           + A+++  P+        A+    I     Y+IP AVF++   +     ++   L+KA  
Sbjct: 138 MIAMVVMAPVQCFFFFLMAVWSGQITSTALYNIPPAVFWTSVRTWMDPTDLPFMLVKALV 197

Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               I ++A   G         +G   T  VV  + +V I+D +     F
Sbjct: 198 FGLIIAVIACGWGLTTKGGPKEVGTSTTGAVVMILILVAIMDVVLTQVLF 247


>gi|78213612|ref|YP_382391.1| hypothetical protein Syncc9605_2096 [Synechococcus sp. CC9605]
 gi|78198071|gb|ABB35836.1| Protein of unknown function DUF140 [Synechococcus sp. CC9605]
          Length = 249

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 112/230 (48%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G+  A++ + +     L+ Q+   G   V +V++IS   G+V   Q A +L++ GA    
Sbjct: 18  GQAVAATLRGRIDRGELLEQLLDAGPGSVLIVLIISVAAGSVFNIQVAAELTRQGAGSTV 77

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
             +++I   REI  LLT+ ++AG+  +A  A++G+MK+ E+IDAI  +  D V  L+ PR
Sbjct: 78  GGILAIGLAREIAPLLTSCLLAGKVATAYAAQLGTMKVTEQIDAITMLRTDPVEYLVVPR 137

Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319
           + A+++  P+        A+    +     Y+IP AVF++   +     ++   L+KA  
Sbjct: 138 MIAMVVMAPVQCFFFFLVAVWSGQLTSTALYNIPPAVFWTSVRTWMAPLDLPFMLVKAVV 197

Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               I  VA   G         +G   T  VV  + +V ++D +     F
Sbjct: 198 FGMIIATVACGWGLTTRGGPKEVGTSTTGAVVMILILVALMDVVLTQVLF 247


>gi|163797504|ref|ZP_02191455.1| hypothetical protein BAL199_23507 [alpha proteobacterium BAL199]
 gi|159177253|gb|EDP61812.1| hypothetical protein BAL199_23507 [alpha proteobacterium BAL199]
          Length = 282

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 77/120 (64%), Gaps = 4/120 (3%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE--IFSIDLMSILQLREIGVLL 215
           RQ   +G   +PVV L +  +G V+A Q     ++F AE  + ++ ++SI   RE+  +L
Sbjct: 69  RQFLEIGYYSLPVVGLTTLFSGMVLALQSYSGFARFSAESAVATVVVLSIT--RELAPVL 126

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
             +M+AGR G+A+ AEIG+M++ E+IDA+ T+  +  + LI+PR+ A  +SLP+L ++ +
Sbjct: 127 AGLMVAGRVGAAMAAEIGTMRVTEQIDALTTLSTNPFKYLIAPRLIAATLSLPILVLIGD 186


>gi|87303089|ref|ZP_01085887.1| possible transporter, membrane component [Synechococcus sp. WH
           5701]
 gi|87282256|gb|EAQ74216.1| possible transporter, membrane component [Synechococcus sp. WH
           5701]
          Length = 249

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 114/242 (47%), Gaps = 2/242 (0%)

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
           H LG  +   G+  ++  K +  L  L  QM   G     +VI+ +   G V   Q A +
Sbjct: 8   HRLGSSVMIGGQSISALAKGRINLNDLFEQMLEAGPGSFLIVIITALAAGTVFNIQVAAE 67

Query: 190 LSQFGAEIFSIDLMSILQL-REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           L++ GA  FS+  +  L L REI  LLTA ++ G+  +A  A++G+MK+ E+IDAI  + 
Sbjct: 68  LTRQGAG-FSVGGILALGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLR 126

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
            D V  L+ PR+ A+++  P+  +L     I    +     Y IP  VF++   +    +
Sbjct: 127 TDPVEYLVVPRVLAMVVMAPVQCLLFFVVGIWSGQVSSTFLYSIPPTVFWNSVRTWMEPS 186

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           ++ + L+KA      I ++A   G         +G   T  VV  +  V ++D +     
Sbjct: 187 DLPSMLVKALVFGLQIAVIACGWGLTTRGGPKEVGTSTTGAVVMILVTVSLVDVVLTQVL 246

Query: 369 FA 370
           F 
Sbjct: 247 FG 248


>gi|225433662|ref|XP_002265320.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 474

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 113/222 (50%), Gaps = 16/222 (7%)

Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
           ++ ++Q+  VG   V V IL +   G     Q   + ++ G       ++++   RE+  
Sbjct: 248 VNTLQQLERVGPRSVGVCILTAAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSRELSP 307

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           ++T++++AGR GSA  AE+G+M+++E+ D +R +G + V  L++PR+ A  I+LP LT+L
Sbjct: 308 VVTSIVVAGRIGSAFAAELGTMQVSEQTDTLRVLGTNPVDYLVTPRVIASCIALPFLTLL 367

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA-------PFMACAIGI 326
                +  ++++    Y I   +            +I + +IK+         ++CA G+
Sbjct: 368 CFTVGMASSALLADSVYGISINIILDSAQRALNSWDIISAMIKSVAFGGIISTVSCAWGV 427

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
             M  G A GV     G+  T+ VV S+  + I D  FA+ Y
Sbjct: 428 TTM--GGAKGV-----GESTTSAVVISLVGIFIAD--FALSY 460


>gi|170077985|ref|YP_001734623.1| hypothetical protein SYNPCC7002_A1371 [Synechococcus sp. PCC 7002]
 gi|169885654|gb|ACA99367.1| conserved hypothetical protein TIGR00056 [Synechococcus sp. PCC
           7002]
          Length = 264

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 109/217 (50%), Gaps = 8/217 (3%)

Query: 157 IRQMYYVGVSGVPVVILISFVT----GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           I QM  VG    P  +LI+ VT    G V   Q A +   FGA      ++ +   RE+ 
Sbjct: 43  IEQMAAVG----PDSLLIALVTAGFVGMVFTIQVAREFIYFGAGTAVGGVLGLSLSRELA 98

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            +LTAV++AGR GSA  AEIG+M++ E+IDA+  +  D +  L+ PR  A  + LPLLT+
Sbjct: 99  PVLTAVVLAGRVGSAFAAEIGTMRVTEQIDALHILRTDPIDYLVVPRFLACCLMLPLLTV 158

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           L+  + + G  I+    Y IP ++F +   S     +I + +IK+      I ++    G
Sbjct: 159 LSLLTGMAGGLIIAINLYQIPQSIFINSAQSFLEYWDIISAMIKSVVFGGLIAVIGCSWG 218

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
                 +  +G+  TT VV S+  + I +   +   F
Sbjct: 219 LTTTGGAKGVGQSTTTAVVTSLLAIFIANFFLSWLMF 255


>gi|303270959|ref|XP_003054841.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
 gi|226462815|gb|EEH60093.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
          Length = 251

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 115/215 (53%), Gaps = 4/215 (1%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I+Q+  VG   + V +L S   G V   Q   + S+ G       L+ +   RE+  ++ 
Sbjct: 39  IQQIARVGPDTLGVAMLTSSFVGMVFTIQFCKEFSKVGLTRVIGGLLGLAFTRELTPVIC 98

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A+++AGR GSAI AE+G+M+++E++D +RT+G D V  L++PR+ A  +SLP+L+++ +F
Sbjct: 99  AIVLAGRVGSAIAAELGTMQVSEQVDQLRTLGSDPVDYLVAPRVVACALSLPILSVV-SF 157

Query: 277 SAIIGASIVI--WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
           +  + ASI++   +Y   P A+  S      T ++I    +K       I  ++   G  
Sbjct: 158 TIGMAASILLADLRYGISPNAIVDSAAKYLET-SDIGVMCVKGLAFGGVIATISCGWGQT 216

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               +  +G+  T  VV S+  + ++D   ++ +F
Sbjct: 217 TTGGAKGVGESTTASVVISLVAIFVVDFFLSMIFF 251


>gi|160882382|ref|ZP_02063385.1| hypothetical protein BACOVA_00331 [Bacteroides ovatus ATCC 8483]
 gi|237719054|ref|ZP_04549535.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|260172011|ref|ZP_05758423.1| hypothetical protein BacD2_09110 [Bacteroides sp. D2]
 gi|299148138|ref|ZP_07041200.1| putative membrane protein [Bacteroides sp. 3_1_23]
 gi|315920324|ref|ZP_07916564.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|156112195|gb|EDO13940.1| hypothetical protein BACOVA_00331 [Bacteroides ovatus ATCC 8483]
 gi|229451433|gb|EEO57224.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|298512899|gb|EFI36786.1| putative membrane protein [Bacteroides sp. 3_1_23]
 gi|313694199|gb|EFS31034.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 247

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 119/228 (52%), Gaps = 24/228 (10%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           + + F    + ++  +GV+ + +V+LISF  GAVI  Q    +       +++  ++   
Sbjct: 24  RMRMFFRQYLNELEQLGVNSIGIVLLISFFIGAVITIQIKLNIESPWMPRWTVGYVT--- 80

Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
            REI +L     +  +++AG+ GS I +E+G+M++ ++IDA+  MG++    LI P+I A
Sbjct: 81  -REIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGINSANYLILPKITA 139

Query: 263 LIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAV--FFSRFHSTATLANIFTGLI 315
           ++  +P+L   + F+ IIGA    W        D+ + +   F+ +        I+ G+I
Sbjct: 140 MVTVIPILVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQYMFNEWF-------IWAGII 192

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
           K+ F A  I  V+   G+ V   S ++GK  T  VV S S++I+   L
Sbjct: 193 KSLFFAFIIASVSAFFGYTVEGGSIAVGKASTDAVVSS-SVLILFSDL 239


>gi|160890565|ref|ZP_02071568.1| hypothetical protein BACUNI_03008 [Bacteroides uniformis ATCC 8492]
 gi|270295705|ref|ZP_06201905.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|317479890|ref|ZP_07939007.1| hypothetical protein HMPREF1007_02124 [Bacteroides sp. 4_1_36]
 gi|156859564|gb|EDO52995.1| hypothetical protein BACUNI_03008 [Bacteroides uniformis ATCC 8492]
 gi|270273109|gb|EFA18971.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|316903964|gb|EFV25801.1| hypothetical protein HMPREF1007_02124 [Bacteroides sp. 4_1_36]
          Length = 247

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 118/235 (50%), Gaps = 25/235 (10%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G   A   + + F    + ++  +GV+ + +V+LISF  GAVI  Q    +       ++
Sbjct: 16  GRVFARPERMRMFFRQYVNELEQLGVNSIGIVLLISFFIGAVITIQIKLNIESPFMPRWT 75

Query: 200 IDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
           +  ++    REI +L     +  +++AG+ GS I +E+G+M++ ++IDA+  MG++    
Sbjct: 76  VGYVT----REIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGVNSANY 131

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAV---FFSRFHSTAT 306
           LI P+I A++ ++PL+   + F+ IIGA    W        D+ + +   F   F     
Sbjct: 132 LILPKIAAMVTTIPLMVTFSIFAGIIGAFCTCWFGGIMSAVDLEYGLQYMFVEWF----- 186

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
              I+ G+IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D
Sbjct: 187 ---IWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLILFAD 238


>gi|213027514|ref|ZP_03341961.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. 404ty]
          Length = 152

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/107 (39%), Positives = 69/107 (64%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y VGV  + ++I+     G V+  QG   L+ + AE     L+++  LRE+G ++
Sbjct: 44  LVRQLYNVGVLSMLIIIVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
            A++ AGR+GSA+ AEIG M+  E++ ++  M +D +R +ISPR WA
Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWA 150


>gi|284034024|ref|YP_003383955.1| hypothetical protein Kfla_6153 [Kribbella flavida DSM 17836]
 gi|283813317|gb|ADB35156.1| protein of unknown function DUF140 [Kribbella flavida DSM 17836]
          Length = 257

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 1/217 (0%)

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           L   ++Q ++V    +    L++   GAVIA Q    + QFGA+ F+     +  +RE  
Sbjct: 33  LREFLQQAWFVASVTIIPTALVAIPFGAVIALQVGGLIQQFGAQAFTGSAAVLAVVREAS 92

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            + TA++IAG  GSAI A++GS KI EE+DA+  +G+D +  L+ PR+ A ++    L  
Sbjct: 93  PIATALLIAGAGGSAICADLGSRKIREELDAMMVLGIDPIHRLVVPRVLATMLVAFFLNG 152

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
             +   ++G  +      D     + + F + A L +++ G  KA        +VA  +G
Sbjct: 153 FVSVVGVMGGYVFNVVLQDGTPGAYIASFTALAHLPDLWQGQAKALVFGFIAAVVASYKG 212

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIID-SLFAIFY 368
              G     +G  V   VV +  ++ + + S+ AI++
Sbjct: 213 VNAGGGPKGVGDAVNQSVVITFMLLFVANFSMTAIYF 249


>gi|317125894|ref|YP_004100006.1| hypothetical protein Intca_2778 [Intrasporangium calvum DSM 43043]
 gi|315589982|gb|ADU49279.1| protein of unknown function DUF140 [Intrasporangium calvum DSM
           43043]
          Length = 256

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 111/220 (50%), Gaps = 10/220 (4%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I+Q +++    +    L+S   GAVIA Q      Q GA+ ++     +  LRE   ++T
Sbjct: 37  IQQSWFLASVTILPTALVSIPFGAVIALQLGTLTRQLGAQSYTGAASVLAVLREASPIVT 96

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++IAG  GSAI A++GS KI EEIDA+  +G+  ++ L+ PR+ A +    L+ +L N 
Sbjct: 97  ALLIAGAGGSAICADLGSRKIREEIDAMEVLGISPIQRLVVPRVLASM----LVAVLLNG 152

Query: 277 SAIIGASIVIWKYYDI-----PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
              +   +  + +  I     P A + + F + A L +++ G +KA       GIVA  +
Sbjct: 153 LVSVVGVVGGYVFNVIVQGGTPGA-YIASFTAMAQLPDLWAGELKALVFGAIAGIVAAHK 211

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           G   G     +G  V   VV +  ++ +++ +    YF +
Sbjct: 212 GLTAGGGPKGVGDAVNQSVVITFMLLFVVNFVITAVYFQV 251


>gi|167946701|ref|ZP_02533775.1| hypothetical protein Epers_09188 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 258

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 104/211 (49%), Gaps = 2/211 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I Q+ + G+  +P + +++   G  +  Q  F    FG E     L++ L   E G LLT
Sbjct: 46  ITQLIFSGIDALPTITILALAVGLSVTTQLIFAAQVFGQEADVASLLANLVALEFGSLLT 105

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI-LAN 275
           A+++ GRSGSAI  ++G+M +N E++ +  +G+D     +SPR+  ++I+  +L I  + 
Sbjct: 106 AIVMIGRSGSAIAVDLGNMSLNREVEGLELLGIDVHAFFVSPRLIGMVIAQLVLAIYFSA 165

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
           FS + G ++         F   F+   +   L ++    IK       IG  A  +G +V
Sbjct: 166 FSLVTGITLAALLESTSNFKYLFAVVSAFEPL-DLLLFFIKNLLFGLVIGANACLKGLSV 224

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           G     + +     +V S+ +V ++D +F +
Sbjct: 225 GQSVTQVPQVTQKAIVNSLVMVFVLDGVFVL 255


>gi|237712741|ref|ZP_04543222.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262408122|ref|ZP_06084669.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|293369494|ref|ZP_06616073.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f]
 gi|294644221|ref|ZP_06721991.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
 gi|294808601|ref|ZP_06767341.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b]
 gi|298480165|ref|ZP_06998363.1| membrane protein [Bacteroides sp. D22]
 gi|229447218|gb|EEO53009.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262353674|gb|EEZ02767.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292635379|gb|EFF53892.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f]
 gi|292640431|gb|EFF58679.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
 gi|294444200|gb|EFG12927.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b]
 gi|298273446|gb|EFI15009.1| membrane protein [Bacteroides sp. D22]
          Length = 247

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 116/227 (51%), Gaps = 25/227 (11%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           + + F    + ++  +GV+ + +V+LISF  GAVI  Q    +       +++  ++   
Sbjct: 24  RMRMFFRQYLNELEQLGVNSIGIVLLISFFIGAVITIQIKLNIESPWMPRWTVGYVT--- 80

Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
            REI +L     +  +++AG+ GS I +E+G+M++ ++IDA+  MG++    LI P+I A
Sbjct: 81  -REIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGINSANYLILPKITA 139

Query: 263 LIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAV---FFSRFHSTATLANIFTGL 314
           ++  +P+L   + F+ IIGA    W        D+ + +   F   F        I+ G+
Sbjct: 140 MVTVIPILVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQYMFVEWF--------IWAGI 191

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           IK+ F A  I  V+   G+ V   S ++GK  T  VV S  +++  D
Sbjct: 192 IKSLFFAFIIASVSAFFGYTVDGGSIAVGKASTDAVVSSSVLILFAD 238


>gi|51210044|ref|YP_063708.1| conserved hypothetical plastid protein [Gracilaria tenuistipitata
           var. liui]
 gi|50657798|gb|AAT79783.1| conserved hypothetical plastid protein [Gracilaria tenuistipitata
           var. liui]
          Length = 252

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 107/216 (49%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           S++ Q+  VG   + +VI+ +F  G V   Q   +     A      +++I  +RE+  +
Sbjct: 28  SVLEQIKIVGPDSLNIVIITAFFLGMVFTIQIVKEFLYINAAALIGSVLTIAFIRELSPV 87

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           LT+V+I GR  S   AE+ +M + E+++A+  +  + ++ L+ PR+ A I+ LP L I +
Sbjct: 88  LTSVIIVGRIASYFTAELATMSVTEQLNALYLLETNPLKYLVLPRVIACILMLPCLNIFS 147

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
             +++  +S + +  Y I   +FF    S+  + +IF  L+K       I  ++   G  
Sbjct: 148 FITSLFSSSFICFTVYSIHPEIFFVSSFSSLIVQDIFKSLLKTIVFGFLIASISCFWGLK 207

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               +  +GK  T  VV S+  V I D L +   F+
Sbjct: 208 ATGGAKGVGKSTTLSVVTSLLAVFIFDFLLSYIMFS 243


>gi|295088056|emb|CBK69579.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Bacteroides xylanisolvens
           XB1A]
          Length = 235

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 116/227 (51%), Gaps = 25/227 (11%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           + + F    + ++  +GV+ + +V+LISF  GAVI  Q    +       +++  ++   
Sbjct: 12  RMRMFFRQYLNELEQLGVNSIGIVLLISFFIGAVITIQIKLNIESPWMPRWTVGYVT--- 68

Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
            REI +L     +  +++AG+ GS I +E+G+M++ ++IDA+  MG++    LI P+I A
Sbjct: 69  -REIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGINSANYLILPKITA 127

Query: 263 LIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAV---FFSRFHSTATLANIFTGL 314
           ++  +P+L   + F+ IIGA    W        D+ + +   F   F        I+ G+
Sbjct: 128 MVTVIPILVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQYMFVEWF--------IWAGI 179

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           IK+ F A  I  V+   G+ V   S ++GK  T  VV S  +++  D
Sbjct: 180 IKSLFFAFIIASVSAFFGYTVDGGSIAVGKASTDAVVSSSVLILFAD 226


>gi|99081621|ref|YP_613775.1| hypothetical protein TM1040_1780 [Ruegeria sp. TM1040]
 gi|99037901|gb|ABF64513.1| protein of unknown function DUF140 [Ruegeria sp. TM1040]
          Length = 260

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 108/207 (52%), Gaps = 7/207 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L   +  VG   +PVV L +  TG  +A Q     ++F AE     +++I  +RE+G +L
Sbjct: 45  LANALLQVGWLSLPVVALTAIFTGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVL 104

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
             +MIA R  S+I AEI +M++ E+IDA+ T+  + ++ L++PR+ A ++++P+L  + +
Sbjct: 105 VGLMIAARVTSSIAAEIATMRVTEQIDALVTLSTNPMKYLVAPRVLAALLTVPVLVGVGD 164

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              I+G  +V  +  D   A +         L +I + L+K      A G +A   G   
Sbjct: 165 IIGIMGGYVVATETLDFNAAAYLKNTVDFLELRDIVSSLVK----GAAFGTIAALMGCYY 220

Query: 336 GVHSNSLGK---KVTTCVVQSISIVII 359
           G+ S    +   + T   V++ +++I+
Sbjct: 221 GMQSGRGAQGVGRATKGSVEAAAVLIL 247


>gi|226305212|ref|YP_002765170.1| YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229490705|ref|ZP_04384543.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
 gi|226184327|dbj|BAH32431.1| putative YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229322525|gb|EEN88308.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
          Length = 264

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 131/259 (50%), Gaps = 9/259 (3%)

Query: 116 KKIVKFINDSCSQA-HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
             ++  +N + +QA +I+ L +          ++F+ F    I Q +++    +    L+
Sbjct: 6   NSVLSPVNGALTQAGNIVELFVDVVRNTFRRPFQFREF----IEQAWFIASVTILPTALV 61

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           +   GAV++ Q    + Q GAE F+     +  +++   L+TA+++AG +GSA+ A++GS
Sbjct: 62  AIPFGAVVSLQTGSLIKQLGAESFTGAASVLAVIQQGSPLVTALLVAGAAGSAVTADLGS 121

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI--VIWKYYDI 292
             I EEIDA+  +G++ ++ L+ PR+ A+++   LL  L +   I G     VI +  + 
Sbjct: 122 RTIREEIDAMEVLGINPIQRLVVPRVLAMVLIAVLLNGLVSVVGIAGGYFFNVILQGGN- 180

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
           P A + S F + A L +I++G IKA       G+++  +G         +G+ V   VV 
Sbjct: 181 PGA-YISSFSAFAQLPDIWSGEIKAAVFGVIAGVISAYKGLHPSGGPKGVGEAVNQAVVI 239

Query: 353 SISIVIIIDSLFAIFYFAI 371
           +  ++   + +  + Y  I
Sbjct: 240 TFLLLFFANLILTMVYLQI 258


>gi|163739574|ref|ZP_02146983.1| hypothetical protein RGBS107_12532 [Phaeobacter gallaeciensis
           BS107]
 gi|163741440|ref|ZP_02148831.1| membrane protein [Phaeobacter gallaeciensis 2.10]
 gi|161385174|gb|EDQ09552.1| membrane protein [Phaeobacter gallaeciensis 2.10]
 gi|161387033|gb|EDQ11393.1| hypothetical protein RGBS107_12532 [Phaeobacter gallaeciensis
           BS107]
          Length = 266

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 7/207 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+  +  VG   +PVV L +  TGA +A Q     ++F AE     +++I  +RE+G +L
Sbjct: 51  LLNALLQVGWLSLPVVGLTAIFTGAALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVL 110

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
             +MIA R  S+I AEI +MK+ E+IDA+ T+    ++ L++PR+ A +I++P+L  + +
Sbjct: 111 VGLMIAARVTSSIAAEIATMKVTEQIDALVTLSTHPMKYLVAPRVLAALITVPVLVGVGD 170

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              I+G  +V  +      A +         L +I + L+K      A G +A   G   
Sbjct: 171 IIGIMGGYVVATQNLGFNPAAYLKNTVDFLELRDIVSSLVK----GAAFGTIAATMGCYY 226

Query: 336 GVHSNSLGKKV---TTCVVQSISIVII 359
           G+ S    + V   T   V++ +++I+
Sbjct: 227 GMQSGRGAQGVGRATKGSVEAAAVLIL 253


>gi|189463681|ref|ZP_03012466.1| hypothetical protein BACINT_00012 [Bacteroides intestinalis DSM
           17393]
 gi|189438631|gb|EDV07616.1| hypothetical protein BACINT_00012 [Bacteroides intestinalis DSM
           17393]
          Length = 247

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 120/243 (49%), Gaps = 25/243 (10%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G  I   G   A   + + F    + +M  +GV+ + +V+LISF  GAVI  Q    + 
Sbjct: 8   VGRYIMLMGRTFARPERMRMFFRQYLNEMGQLGVNSIGIVLLISFFIGAVITIQIKLNIE 67

Query: 192 QFGAEIFSIDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
                 +++  ++    REI +L     +  +++AG+ GS I +E+G+M++ ++IDA+  
Sbjct: 68  SPFMPRWTVGYVT----REIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEI 123

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAV---FF 298
           MG++    LI P+I A++ ++P L   + F+ IIGA    W        D+ + +   F 
Sbjct: 124 MGVNSANYLILPKICAMVTTIPFLVTFSIFAGIIGAFATCWFGGIMSAVDLEYGLQYMFV 183

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
             F        I+ G+IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++
Sbjct: 184 EWF--------IWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLIL 235

Query: 359 IID 361
             D
Sbjct: 236 FAD 238


>gi|33863666|ref|NP_895226.1| putative transporter, membrane component [Prochlorococcus marinus
           str. MIT 9313]
 gi|33635249|emb|CAE21574.1| possible transporter, membrane component [Prochlorococcus marinus
           str. MIT 9313]
          Length = 248

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 110/231 (47%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G+  A++ + +   + L  Q+   G     +V++     G V   Q A +LS+ GA    
Sbjct: 18  GQAVAATARGRINKVDLFDQLMEAGPGSFLIVLITGLAAGTVFNIQVAAELSRQGAGSTV 77

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
             +++I   REI  LLTA ++ G+  +A  A++G+MK+ E+IDAI  +  + V  L+ PR
Sbjct: 78  GGILAIGMAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTEPVEYLVVPR 137

Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319
           + A+++  P+  IL    A+    +     Y IP  VF++   +  T  ++   LIK+  
Sbjct: 138 VIAMVVMAPVQCILFFGIALWSGQVSSTNLYQIPPEVFWNSVRTWLTPDDLPFMLIKSLV 197

Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               I ++A   G         +G   T  VV ++  V ++D L     F+
Sbjct: 198 FGLQIAVLACGWGLTTRGGPKEVGTSTTGAVVMTLVTVSLMDVLLTQILFS 248


>gi|312141010|ref|YP_004008346.1| integral membrane protein yrbe4a [Rhodococcus equi 103S]
 gi|325675353|ref|ZP_08155037.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Rhodococcus equi ATCC 33707]
 gi|311890349|emb|CBH49667.1| putative integral membrane protein YrbE4A [Rhodococcus equi 103S]
 gi|325553324|gb|EGD23002.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Rhodococcus equi ATCC 33707]
          Length = 264

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 130/258 (50%), Gaps = 11/258 (4%)

Query: 118 IVKFINDSCSQA-HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           ++K +N + +QA +I+ L +          ++FK F    I Q +++    +    L++ 
Sbjct: 8   LMKPVNGALTQAGNIVQLFVDVVRNTFKRPFQFKEF----IEQAWFIASVTILPTALVAI 63

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             GAV++ Q    + Q GAE F+     +  +++   ++TA++IAG +GSA+ A++GS  
Sbjct: 64  PFGAVVSLQTGSLIKQLGAESFTGAASVLAVIQQGSPIVTALLIAGAAGSAVTADLGSRT 123

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA---SIVIWKYYDIP 293
           I EEIDA+  +G++ V+ L+ PR+ A+++   LL  L +   I G    ++++      P
Sbjct: 124 IREEIDAMEVLGINPVQRLVVPRVLAMVLVAVLLNGLVSVVGIAGGYFFNVILQG--GTP 181

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
            A + + F + A L +++   +KA       G++A  +G         +G+ V   VV +
Sbjct: 182 GA-YLASFSALAQLPDLYIAEVKAAIFGVIAGVIAAYKGLTPKGGPKGVGEAVNQAVVIT 240

Query: 354 ISIVIIIDSLFAIFYFAI 371
             ++   + +  + Y  I
Sbjct: 241 FLVLFFANLILTMVYLQI 258


>gi|87123683|ref|ZP_01079533.1| possible transporter, membrane component [Synechococcus sp. RS9917]
 gi|86168252|gb|EAQ69509.1| possible transporter, membrane component [Synechococcus sp. RS9917]
          Length = 248

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 110/231 (47%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G+  A++ + +   + L  Q+   G     +VI+     G+V   Q A +LS+ GA    
Sbjct: 18  GQAVAATARGRINTIDLFDQLLEAGPGSFLIVIITGIAAGSVFNIQVAAELSRQGAGSTV 77

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
             ++++   REI  LLTA ++ G+  +A  A++G+MK+ E+IDAI  +  D V  L+ PR
Sbjct: 78  GGILALGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTDPVEYLVVPR 137

Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319
           + A+++  P+  +L    AI    I   + Y IP +VF++   +     ++   LIKA  
Sbjct: 138 LIAMVVMAPVQCLLFFGVAIWSGQITSTELYSIPPSVFWTSVRTWMQPDDLPFMLIKALV 197

Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               I +++   G         +G   T  VV  +  V ++D L     F 
Sbjct: 198 FGLQIAVLSCGWGLTTEGGPKEVGTSTTGSVVMILVTVALMDVLLTQILFG 248


>gi|84494809|ref|ZP_00993928.1| putative ABC transporter integral membrane protein [Janibacter sp.
           HTCC2649]
 gi|84384302|gb|EAQ00182.1| putative ABC transporter integral membrane protein [Janibacter sp.
           HTCC2649]
          Length = 203

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 12/199 (6%)

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GAVIA Q      Q GA+ F+     +  +RE   ++TA++IAG  GSAI A++GS KI 
Sbjct: 6   GAVIALQLGTLTRQLGAQSFTGAASVLAVVREASPIVTALLIAGAGGSAICADLGSRKIR 65

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI------ 292
           EE+DA+  +G+  ++ L+ PR+ A +    L+ +L N    +      + ++++      
Sbjct: 66  EELDAMEVLGISPIQRLVVPRVLATM----LVAVLLNGLVSVVGVGGGY-FFNVVIQGGT 120

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
           P A + + F + A LA+++T  IKA        IVA  +G   G     +G  V   VV 
Sbjct: 121 PGA-YLASFTALAQLADLWTSEIKALLFGAVAAIVASYKGLTAGGGPKGVGDAVNQSVVI 179

Query: 353 SISIVIIIDSLFAIFYFAI 371
           +  ++ +I+ + +  YF +
Sbjct: 180 TFMLLFVINFVISAIYFQV 198


>gi|116071211|ref|ZP_01468480.1| hypothetical protein BL107_16235 [Synechococcus sp. BL107]
 gi|116066616|gb|EAU72373.1| hypothetical protein BL107_16235 [Synechococcus sp. BL107]
          Length = 249

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 111/230 (48%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G+   ++ + +   + L  Q+   G   + +V++IS   G+V   Q A +L++ GA    
Sbjct: 18  GQAVTATMRGRINTVELSDQLMEAGPGSLLIVLIISVAAGSVFNIQVAAELTRQGAGSTV 77

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
             ++++   REI  LLTA ++AG+  +A  A++G+MK+ E+IDAI  +  D V  L+ PR
Sbjct: 78  GGILALGLAREIAPLLTACLLAGKVATAYAAQLGTMKVTEQIDAITMLRTDPVEYLVVPR 137

Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319
           + AL++  PL        A+    I     Y+IP +VF++   +     ++   L+KA  
Sbjct: 138 LIALVVMAPLQCFFFFIVAVWSGQITSTALYNIPPSVFWTSVRTWMHPEDLPFMLVKAVV 197

Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               I  ++   G         +G   T  VV  + +V I+D +     F
Sbjct: 198 FGLIIATISCGWGLTTRGGPKEVGTSTTGAVVMILILVCIMDVVLTQVLF 247


>gi|301167973|emb|CBW27559.1| putative membrane protein [Bacteriovorax marinus SJ]
          Length = 292

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 119/220 (54%), Gaps = 14/220 (6%)

Query: 147 YKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSID----- 201
           Y+FK F      Q Y++G   + ++ L    TG V+A Q     + FG ++ ++D     
Sbjct: 71  YRFKLF----AEQFYFIGNKSLFIITLAGSFTGMVMAYQ-----TYFGFKLINVDSLVGS 121

Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261
           +++I   +E+  +L+ +++AGR+G+A+ A+IG+MK+ E++DA+  MG+D  + L  PRI 
Sbjct: 122 VVAISLAKELAPVLSGLIVAGRAGAAMAAQIGTMKVTEQVDALEVMGIDSYQYLAVPRIL 181

Query: 262 ALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMA 321
           A  +SLP+L+I+  F   +G+ IV      I   ++ S+      + +I  G+IKA    
Sbjct: 182 AATLSLPMLSIVFLFVGNVGSYIVGTVALLIDETMYLSKLGDFMFVGDIVQGIIKATVFG 241

Query: 322 CAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
             I ++    GF V   +  +GK     VV  +  V+++D
Sbjct: 242 FVIAVIGTYFGFNVTKGAEGVGKGTNLAVVWGMISVLVLD 281


>gi|167765445|ref|ZP_02437558.1| hypothetical protein BACSTE_03835 [Bacteroides stercoris ATCC
           43183]
 gi|167697073|gb|EDS13652.1| hypothetical protein BACSTE_03835 [Bacteroides stercoris ATCC
           43183]
          Length = 247

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 119/235 (50%), Gaps = 25/235 (10%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G   A   + + F    I ++  +GV+ + +V+LISF  GAVI  Q    +       ++
Sbjct: 16  GRVFARPERMRMFFRQYINEIEQLGVNSIGIVLLISFFIGAVITIQIKLNIESPFMPRWT 75

Query: 200 IDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
           +  ++    REI +L     +  +++AG+ GS I +E+G+M++ ++IDA+  MG++    
Sbjct: 76  VGYVT----REIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGVNSANY 131

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAV---FFSRFHSTAT 306
           LI P+I A++ ++PL+   + F+ IIGA    W        D+ + +   F   F     
Sbjct: 132 LILPKIAAMVSTIPLMVTFSIFAGIIGAFCTCWFGGIMSAVDLEYGLQYMFVEWF----- 186

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
              I+ G+IK+ F A  I  V+   G++V   S  +GK  T  VV S  +++  D
Sbjct: 187 ---IWCGIIKSLFFAFIIASVSAFFGYSVEGGSIEVGKASTDSVVCSSVLILFAD 238


>gi|78184152|ref|YP_376587.1| hypothetical protein Syncc9902_0575 [Synechococcus sp. CC9902]
 gi|78168446|gb|ABB25543.1| Protein of unknown function DUF140 [Synechococcus sp. CC9902]
          Length = 249

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 110/231 (47%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G+   ++ + +   + L  Q+   G   + +V +IS   G+V   Q A +L++ GA    
Sbjct: 18  GQAVTATMRGRINTVDLSDQLMEAGPGSLLIVFIISVAAGSVFNIQVAAELTRQGAGSTV 77

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
             +++I   REI  LLTA ++AG+  +A  A++G+MK+ E+IDAI  +  D V  L+ PR
Sbjct: 78  GGILAIGLAREIAPLLTACLLAGKVATAYAAQLGTMKVTEQIDAITMLRTDPVEYLVVPR 137

Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319
           + AL++  PL        A+    I     Y+IP +VF++   +     ++   L+KA  
Sbjct: 138 LIALVVMAPLQCFFFFIVAVWSGQITSTALYNIPPSVFWTSVRTWMHPEDLPFMLVKAVV 197

Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               I  ++   G         +G   T  VV  + +V I+D +     F 
Sbjct: 198 FGLIIATISCGWGLTTKGGPKEVGTSTTGAVVMILILVCIMDVVLTQVLFG 248


>gi|299137710|ref|ZP_07030891.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX8]
 gi|298600351|gb|EFI56508.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX8]
          Length = 256

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 107/224 (47%), Gaps = 4/224 (1%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G+     ++F  F     RQ+   G   + ++++  F  GAV+       L  FGA    
Sbjct: 23  GDSLRPPFEFAQFF----RQVAEAGNKSLILIVVSGFALGAVMTLHTRSTLVMFGATAMI 78

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
             + ++    EIG L+  +++AGR GS I A + +M+  E+IDAI ++ +D  + L+ PR
Sbjct: 79  PAVQAVAFFVEIGPLVAGLLLAGRVGSGIGAVLANMRATEQIDAIESLSIDSFKFLVVPR 138

Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319
           + A ++ LP+LT+  +F+ ++G  +       I   ++ +R       +N     +K   
Sbjct: 139 VLACVVVLPILTLFMDFAGLLGGFLSEGLTSHIGPTLYVNRAFDYIQWSNFIAPTLKTTV 198

Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
               IG V+   G+     +  +G+  T  VV S  ++I+ D L
Sbjct: 199 FGFIIGSVSSYFGYTTDKGAKGVGEAATNSVVLSSLLIIVADVL 242


>gi|329942978|ref|ZP_08291752.1| hypothetical protein G5Q_0652 [Chlamydophila psittaci Cal10]
 gi|313848135|emb|CBY17136.1| putative permease component of ABC transporter [Chlamydophila
           psittaci RD1]
 gi|325506979|gb|ADZ18617.1| putative permease component of ABC transporter [Chlamydophila
           psittaci 6BC]
 gi|328814525|gb|EGF84515.1| hypothetical protein G5Q_0652 [Chlamydophila psittaci Cal10]
 gi|328914810|gb|AEB55643.1| ABC transporter, permease protein, putative [Chlamydophila psittaci
           6BC]
          Length = 261

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 114/228 (50%), Gaps = 3/228 (1%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
           S+K K    S+  Q Y +GV+ +PVV+L   VTG V+A Q  +QL   G    +I    +
Sbjct: 35  SWK-KSLFRSISIQGYDIGVASLPVVMLTGAVTGIVLALQSYYQLGIHGLSC-AIGFFVV 92

Query: 206 LQ-LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264
              L EIG +LTA+ ++GR G AI A +G+M++ E++ A+ T+G++ +     PRI A I
Sbjct: 93  KSILVEIGPVLTALALSGRVGGAISAFLGTMRMTEQVSAMETLGVNPLEYFALPRIIAGI 152

Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI 324
           +++P L I A +S I    ++    + +   V+         L++I   ++K+      I
Sbjct: 153 MAMPALVIAAVWSGIFCGYLLCRYAFQLSAQVYLHMVSGNVFLSDIVMVIVKSLVFGFII 212

Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
             +A  +G         + K  T  VV S   ++  + +   F+  +G
Sbjct: 213 TSLACYQGLGKHCRITDVAKVTTAGVVTSYISILFANCVITAFFHVLG 260


>gi|282860201|ref|ZP_06269275.1| conserved hypothetical protein [Prevotella bivia JCVIHMP010]
 gi|282587022|gb|EFB92253.1| conserved hypothetical protein [Prevotella bivia JCVIHMP010]
          Length = 248

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 108/215 (50%), Gaps = 1/215 (0%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSIL 206
           + + FL S IR+M  +GV  + +V+LISF  GAVI  Q    + S +     S  +   +
Sbjct: 26  RIRMFLKSYIREMSQLGVDSIGIVLLISFFIGAVICIQIRLNVQSPWMPHWVSGYVTREI 85

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            L E    +  ++++G+ GS I +E+G+M++ ++IDA+  MG++    LI P+I  L+  
Sbjct: 86  MLLEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALEIMGINSASYLILPKILGLVTI 145

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326
           +P L I +  + ++GA    +  + I  +              ++  +IK+ F A  I  
Sbjct: 146 MPFLVIFSAATGMLGAYATAYIGHIISPSDLTDGVQHQFNQWFMWMSIIKSLFFAFIIAS 205

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           VA   G+ V   S  +GK  T  VV S  +V+  D
Sbjct: 206 VAAYMGYTVKGGSQEVGKASTDAVVTSSVLVLFSD 240


>gi|329957353|ref|ZP_08297873.1| hypothetical protein HMPREF9445_02751 [Bacteroides clarus YIT
           12056]
 gi|328523066|gb|EGF50169.1| hypothetical protein HMPREF9445_02751 [Bacteroides clarus YIT
           12056]
          Length = 247

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 121/243 (49%), Gaps = 25/243 (10%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G  I   G   A   + + F    I ++  +GV+ + +V+LISF  GAVI  Q    + 
Sbjct: 8   VGRYIMLMGRVFARPERMRMFFRQYINEIEQLGVNSIGIVLLISFFIGAVITIQIKLNIE 67

Query: 192 QFGAEIFSIDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
                 +++  ++    REI +L     +  +++AG+ GS I +E+G+M++ ++IDA+  
Sbjct: 68  SPFMPRWTVGYVT----REIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEI 123

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAV---FF 298
           MG++    LI P+I A++ ++PL+   + F+ IIGA    W        D+ + +   F 
Sbjct: 124 MGVNSANYLILPKIAAMVSTIPLMVTFSIFAGIIGAFCTCWFGGIMSAVDLEYGLQYMFV 183

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
             F        I+ G+IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++
Sbjct: 184 EWF--------IWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLIL 235

Query: 359 IID 361
             D
Sbjct: 236 FAD 238


>gi|302767312|ref|XP_002967076.1| hypothetical protein SELMODRAFT_169002 [Selaginella moellendorffii]
 gi|300165067|gb|EFJ31675.1| hypothetical protein SELMODRAFT_169002 [Selaginella moellendorffii]
          Length = 342

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 111/214 (51%), Gaps = 2/214 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           ++Q+  VG   + V +L +   G V   Q   + ++ G       ++++   RE+  ++T
Sbjct: 118 VQQLEAVGPGSLGVNLLTASFVGMVFTIQFVREFAKLGLTRSVGGVLALALARELSPVVT 177

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV++AGR GSA  AE+G+M+++E+ D +R +G D V  LI+PR+ A  +++P LT++  F
Sbjct: 178 AVILAGRVGSAFAAELGTMQVSEQTDTLRVLGTDPVDYLITPRVLACCLAMPFLTLMC-F 236

Query: 277 SAIIGASIVIWK-YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
           S  + AS+++    Y +   +            +I + +IK+      I IV+   G   
Sbjct: 237 SVGMAASVLLADSVYRVSANIILDSAARALQPWDIVSTMIKSFVFGGIISIVSCAWGVTT 296

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              +  +G+  T+ VV S+  + I D + +  +F
Sbjct: 297 LGGAKGVGESTTSAVVISLVCIFIADFILSWCFF 330


>gi|57238787|ref|YP_179923.1| hypothetical protein Erum0570 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58578712|ref|YP_196924.1| hypothetical protein ERWE_CDS_00480 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58616774|ref|YP_195973.1| hypothetical protein ERGA_CDS_00470 [Ehrlichia ruminantium str.
           Gardel]
 gi|57160866|emb|CAH57768.1| putative integral membrane protein [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58416386|emb|CAI27499.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel]
 gi|58417338|emb|CAI26542.1| Conserved hypothetical protein [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 265

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 103/201 (51%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P+V + +  TGAV+  Q A  ++   +  F   ++ +  +RE+G +L  ++IAGR G++
Sbjct: 64  LPIVGVTAIFTGAVLILQNALIINTNVSNDFIAGVVVVAIVRELGPVLIGLIIAGRVGAS 123

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I AEIG+M+I E+IDA+ T+  +  + L+ PR+ A +IS+P+L + A+     G  IV  
Sbjct: 124 IAAEIGTMRITEQIDALFTLNTNPFKYLVVPRVIAAMISMPILILCADLIGSYGGYIVGS 183

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
                   ++           ++  GLIKA      I  +    G+     +  +G   T
Sbjct: 184 FQLGCTPEIYIRGVMKFLHTRDVVLGLIKATVFGFIISFMGCYNGYYCSGGARGVGIATT 243

Query: 348 TCVVQSISIVIIIDSLFAIFY 368
             VV S  ++I ++ +  +FY
Sbjct: 244 YVVVISSMLIIFLNYIVTVFY 264


>gi|224069577|ref|XP_002303003.1| ABC transporter family protein [Populus trichocarpa]
 gi|222844729|gb|EEE82276.1| ABC transporter family protein [Populus trichocarpa]
          Length = 258

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 107/212 (50%), Gaps = 2/212 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           ++Q+  VG   V V +L S   G     Q   + ++ G       ++++   RE+  ++T
Sbjct: 38  LQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSIGGVLALAFSRELSPVVT 97

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           ++++AGR GSA  AE+G+M+++E+ID +R +G D V  L+ PR+ A  ++LP LT++   
Sbjct: 98  SIVVAGRIGSAFAAELGTMQVSEQIDTLRVLGADPVDYLVIPRVIASCLALPFLTLMCFT 157

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
             +  + ++    Y I   +            +I + +IK+      I IV+   G    
Sbjct: 158 VGMASSGLLADSVYGISLNIILDSAQRALNSWDIISAMIKSGVFGAIISIVSCAWGVTTM 217

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
             +  +G+  T+ VV  IS+V I  + FA+ Y
Sbjct: 218 GGAKGVGESTTSAVV--ISLVGIFMADFALSY 247


>gi|218128442|ref|ZP_03457246.1| hypothetical protein BACEGG_00010 [Bacteroides eggerthii DSM 20697]
 gi|317475731|ref|ZP_07934990.1| hypothetical protein HMPREF1016_01972 [Bacteroides eggerthii
           1_2_48FAA]
 gi|217989333|gb|EEC55646.1| hypothetical protein BACEGG_00010 [Bacteroides eggerthii DSM 20697]
 gi|316908114|gb|EFV29809.1| hypothetical protein HMPREF1016_01972 [Bacteroides eggerthii
           1_2_48FAA]
          Length = 247

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 118/235 (50%), Gaps = 25/235 (10%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G   A   + + F    I ++  +GV+ + +V+LISF  GAVI  Q    +       ++
Sbjct: 16  GRVFARPERMRMFFRQYINEIEQLGVNSIGIVLLISFFIGAVITIQIKLNIESPFMPRWT 75

Query: 200 IDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
           +  ++    REI +L     +  +++AG+ GS I +E+G+M++ ++IDA+  MG++    
Sbjct: 76  VGYVT----REIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGVNSANY 131

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAV---FFSRFHSTAT 306
           LI P+I A++ ++PL+   + F+ IIGA    W        D+ + +   F   F     
Sbjct: 132 LILPKIAAMVSTIPLMVTFSIFAGIIGAFCTCWFGGIMSAVDLEYGLQYMFVEWF----- 186

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
              I+ G+IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D
Sbjct: 187 ---IWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLILFAD 238


>gi|302755016|ref|XP_002960932.1| ATP-binding cassette transporter, subfamily I, member 10, SmABCI10
           [Selaginella moellendorffii]
 gi|300171871|gb|EFJ38471.1| ATP-binding cassette transporter, subfamily I, member 10, SmABCI10
           [Selaginella moellendorffii]
          Length = 342

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 111/214 (51%), Gaps = 2/214 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           ++Q+  VG   + V +L +   G V   Q   + ++ G       ++++   RE+  ++T
Sbjct: 118 VQQLEAVGPGSLGVNLLTASFVGMVFTIQFVREFAKLGLTRSVGGVLALALARELSPVVT 177

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV++AGR GSA  AE+G+M+++E+ D +R +G D V  LI+PR+ A  +++P LT++  F
Sbjct: 178 AVILAGRVGSAFAAELGTMQVSEQTDTLRVLGTDPVDYLITPRVLACCLAMPFLTLMC-F 236

Query: 277 SAIIGASIVIWK-YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
           S  + AS+++    Y +   +            +I + +IK+      I IV+   G   
Sbjct: 237 SVGMAASVLLADSVYRVSANIILDSAARALQPWDIVSTMIKSFVFGGIISIVSCAWGVTT 296

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              +  +G+  T+ VV S+  + I D + +  +F
Sbjct: 297 LGGAKGVGESTTSAVVISLVCIFIADFILSWCFF 330


>gi|111018970|ref|YP_701942.1| ABC transporter permease [Rhodococcus jostii RHA1]
 gi|226361065|ref|YP_002778843.1| YrbE family protein [Rhodococcus opacus B4]
 gi|110818500|gb|ABG93784.1| possible ABC transport system, permease component [Rhodococcus
           jostii RHA1]
 gi|226239550|dbj|BAH49898.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 264

 Score = 79.3 bits (194), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 130/256 (50%), Gaps = 19/256 (7%)

Query: 118 IVKFINDSCSQA-HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           +++ +N + +QA +I+ L +          ++F+ F    I Q +++    +    +++ 
Sbjct: 8   VLRPVNGALTQAGNIVELFVDVARNTFKRPFQFREF----IEQAWFIASVTILPTAMVAI 63

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             GAV++ Q    + Q GAE F+     +  +++   L+TA+++AG +GSA+ A++G+  
Sbjct: 64  PFGAVVSLQTGSLIKQLGAESFTGAASVLAVIQQGSPLVTALLVAGAAGSAVTADLGART 123

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI--VIWKYYDIPF 294
           I EEIDA+  +G++ ++ L+ PR+ A+++   LL  L +   I G     VI +  + P 
Sbjct: 124 IREEIDAMEVLGINPIQRLVVPRVLAMVLVAILLNGLVSVVGIAGGYFFNVILQGGN-PG 182

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
           A + + F + A L +I+ G +KA       G++A  +G     H     K V   V QS+
Sbjct: 183 A-YLASFSAFAQLPDIWVGELKAAVFGVIAGVIAAYKGL----HPKGGPKGVGDAVNQSV 237

Query: 355 SIVIIIDSLFAIFYFA 370
            I       F + +FA
Sbjct: 238 VIT------FLLLFFA 247


>gi|29832444|ref|NP_827078.1| ABC transporter integral membrane protein [Streptomyces avermitilis
           MA-4680]
 gi|29609563|dbj|BAC73613.1| putative ABC transporter permease protein [Streptomyces avermitilis
           MA-4680]
          Length = 256

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 104/215 (48%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I+Q ++V    +    L+S   GAVIA Q      Q GA+ FS     +  LRE   ++T
Sbjct: 37  IQQAWFVASVTILPTALVSIPFGAVIALQIGSLTRQLGAQSFSGAASVLAVLREASPIVT 96

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++IAG  G+AI A++G+ KI EEIDA++ +G+D +  L+ PR+ A ++   LL  L + 
Sbjct: 97  ALLIAGAGGTAICADLGARKIREEIDAMQVLGIDPIHRLVVPRVLASMVVAVLLNGLVSV 156

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
             + G         +     + + F + A L++++    KA        IVA  +G    
Sbjct: 157 VGVAGGYFFNVVLQNGTPGAYLASFTTLAQLSDLWAAEAKALVFGAIAAIVASYKGLTAK 216

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
                +G  V   VV +  ++ + + +    YF +
Sbjct: 217 GGPKGVGDAVNQSVVITFMLLFVTNFVMTAVYFQV 251


>gi|77463016|ref|YP_352520.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides
           2.4.1]
 gi|126461890|ref|YP_001043004.1| hypothetical protein Rsph17029_1122 [Rhodobacter sphaeroides ATCC
           17029]
 gi|77387434|gb|ABA78619.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides
           2.4.1]
 gi|126103554|gb|ABN76232.1| protein of unknown function DUF140 [Rhodobacter sphaeroides ATCC
           17029]
          Length = 260

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 106/214 (49%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+  +  +G   +PVV L +  TG  +A Q     ++F AE     +++I   RE+G +L
Sbjct: 45  LLTALIQIGWLSLPVVGLTAIFTGGALALQIYAGGARFSAEAVVPSIVAIGMTRELGPVL 104

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
             +M+A R  S+I AEIG+MK+ E+IDA+ T+  + ++ L  PR+ A  +++P+L  + +
Sbjct: 105 GGLMVAARVASSIAAEIGTMKVTEQIDALVTLSTNPLKYLAVPRVLAATLAVPILVAVGD 164

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              I G  +V     D   A +         + ++ +GL+K       + ++    G   
Sbjct: 165 SIGIAGGWLVGVNRLDFNSATYIKNTTDFLEVWDVGSGLVKGAAFGFIVALMGCYHGMNS 224

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           G  +  +G+   + VV +  +++  + L    +F
Sbjct: 225 GRGAQGVGRATKSAVVAASVLILAANYLLTEVFF 258


>gi|85703132|ref|ZP_01034236.1| ABC transporter, inner membrane subunit [Roseovarius sp. 217]
 gi|85672060|gb|EAQ26917.1| ABC transporter, inner membrane subunit [Roseovarius sp. 217]
          Length = 261

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 118/246 (47%), Gaps = 8/246 (3%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           IG+ +   +N   S   I               + ++ FL +L++    +G   +PVV +
Sbjct: 11  IGRTV---LNGLASMGRIALFASDTLSHLARPPFYWREFLHALVQ----IGWLSLPVVGM 63

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
            +  TG  +A Q     ++F AE     +++I   RE+G +L  +M+A R  S+I AEIG
Sbjct: 64  TALFTGGALALQIYAGGARFNAETVVPSIVAIGLTRELGPVLGGLMVAARVASSIAAEIG 123

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           +MK+ E+IDA+ T+  + ++ L  PR+ A  +++P+L  + +   I+G  +V     D  
Sbjct: 124 TMKVTEQIDALTTLSTNPMKYLTLPRVLAATLAVPVLVGVGDVIGIMGGFLVGVGRLDFS 183

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
            A +           ++ +GLIK       + ++    G   G  +  +G+   + VV +
Sbjct: 184 AATYLHNTMDFLETWDVVSGLIKGAAFGFIVALMGCYYGMNSGRGAQGVGRATKSAVVAA 243

Query: 354 ISIVII 359
            S++I+
Sbjct: 244 -SVLIL 248


>gi|221638873|ref|YP_002525135.1| ABC transporter inner membrane subunit [Rhodobacter sphaeroides
           KD131]
 gi|221159654|gb|ACM00634.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides
           KD131]
          Length = 260

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 106/214 (49%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+  +  +G   +PVV L +  TG  +A Q     ++F AE     +++I   RE+G +L
Sbjct: 45  LLTALIQIGWLSLPVVGLTAIFTGGALALQIYAGGARFSAEAVVPSIVAIGMTRELGPVL 104

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
             +M+A R  S+I AEIG+MK+ E+IDA+ T+  + ++ L  PR+ A  +++P+L  + +
Sbjct: 105 GGLMVAARVASSIAAEIGTMKVTEQIDALVTLSTNPLKYLAVPRVLAATLAVPILVAVGD 164

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              I G  +V     D   A +         + ++ +GL+K       + ++    G   
Sbjct: 165 SIGIAGGWLVGVNRLDFNSATYIKNTTDFLEVWDVGSGLVKGAAFGFIVALMGCYHGMNS 224

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           G  +  +G+   + VV +  +++  + L    +F
Sbjct: 225 GRGAQGVGRATKSAVVAASVLILAANYLLTEVFF 258


>gi|254431004|ref|ZP_05044707.1| ABC-type transport system involved in resistance to organic
           solvents permease component [Cyanobium sp. PCC 7001]
 gi|197625457|gb|EDY38016.1| ABC-type transport system involved in resistance to organic
           solvents permease component [Cyanobium sp. PCC 7001]
          Length = 258

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 109/219 (49%), Gaps = 8/219 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++++   G     +V++ +   G V   Q   +LS+ GA      L+++   REI  LL
Sbjct: 44  LMQELLEAGPGSFLIVVITALAAGTVFNIQVVAELSKQGANAAVGGLLALGLSREIAPLL 103

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL-- 273
           TA ++ G+  +A  A++G+MK+ E+IDAI  +  D V+ L+ PR+ A+++  P+  +L  
Sbjct: 104 TATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTDPVQYLVVPRVLAMVVMAPVQCLLFF 163

Query: 274 --ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
               +S  + +S++    Y+IP +VF++   +     ++   L+KA      I ++A   
Sbjct: 164 GVGIWSGQLSSSLL----YNIPPSVFWTSVRTWMQPEDLPFMLVKALVFGLQIAVIACGW 219

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G         +G   T  VV  +  V ++D+L     F 
Sbjct: 220 GLTTRGGPKEVGTSTTGAVVMILVTVALMDALLTKVLFG 258


>gi|303236789|ref|ZP_07323368.1| conserved hypothetical protein [Prevotella disiens FB035-09AN]
 gi|302482957|gb|EFL45973.1| conserved hypothetical protein [Prevotella disiens FB035-09AN]
          Length = 248

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 116/228 (50%), Gaps = 22/228 (9%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           +F+ FL   +++M  +GV  + +V+LISF  GAVI  Q    +      ++    ++   
Sbjct: 26  RFRMFLKQYVKEMSQLGVDSIGIVLLISFFIGAVICIQIKLNVQSPWMPLWVSGYVT--- 82

Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
            REI +L     +  +++AG+ GS I +E+G+M++ ++IDA+  MG++    LI P+I  
Sbjct: 83  -REIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGINSASYLILPKIAG 141

Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN------IFTGLIK 316
           LI  +P L I +    I+GA      Y    FA   +    T+ L +      ++  ++K
Sbjct: 142 LITIMPFLVIFSAAMGIVGA------YATAYFAHIITPVDLTSGLQHSFNSWFMYMSIMK 195

Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           + F A  I  V+   G+ V   S  +GK  T  VV S S++I+   +F
Sbjct: 196 SLFFAFIIASVSSYFGYTVKGGSFDVGKSSTDAVVSS-SVLILFSDVF 242


>gi|225677253|ref|ZP_03788238.1| hypothetical protein WUni_007540 [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225590703|gb|EEH11945.1| hypothetical protein WUni_007540 [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 187

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 88/159 (55%), Gaps = 1/159 (0%)

Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261
           L++I  ++E+G +L ++++ G+ GS++ AEIG+M+I E+ID + T+ ++  + LI+PRI 
Sbjct: 20  LVTITIIKELGPVLISLIMVGKVGSSVAAEIGTMRITEQIDVLTTLNINPFKYLIAPRIL 79

Query: 262 ALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMA 321
           A II  P+LT+ A+   I G  I     ++    ++           +  TGLIKA    
Sbjct: 80  ASIIVFPILTVCADLIGIFGGCITAVFEFNHNLNIYIKHTAQFFNTYDFITGLIKATVFG 139

Query: 322 CAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             I + +   G+     +  +G   T+ VV S SI+II+
Sbjct: 140 AIISVSSCYYGYHCKEGARGVGVATTSTVVLS-SILIIL 177


>gi|171060067|ref|YP_001792416.1| hypothetical protein Lcho_3393 [Leptothrix cholodnii SP-6]
 gi|170777512|gb|ACB35651.1| protein of unknown function DUF140 [Leptothrix cholodnii SP-6]
          Length = 259

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 113/214 (52%), Gaps = 1/214 (0%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           Q++++G   + ++ +     G V+  QG + L ++G+      L+++  +RE+G ++TA+
Sbjct: 46  QIHFLGNHSLAIIGVSGLFVGFVLGLQGYYTLQRYGSSEALGLLVALSLVRELGPVVTAL 105

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           + AGR+G+A+ AEIG MK  E++ A+  M +D ++ +++PR    ++++PLL  + +   
Sbjct: 106 LFAGRAGTALTAEIGLMKSGEQLAAMEMMAVDPIQRVLAPRFIGGMVAMPLLAAVFSAVG 165

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           IIG  +V      +    F+S+      +  +I  G+IK+   A  +  +A+ +G+    
Sbjct: 166 IIGGWLVGVVMIGVDAGSFWSQMQGGVDVFKDIGNGVIKSVVFALIVTFIALLQGYECQP 225

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
               + +  T  VV S   V+  D +     F+I
Sbjct: 226 TPEGVARATTRTVVVSSLAVLAFDFVLTALMFSI 259


>gi|120401520|ref|YP_951349.1| hypothetical protein Mvan_0498 [Mycobacterium vanbaalenii PYR-1]
 gi|119954338|gb|ABM11343.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 269

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P+V+L SF    ++ + GA   S  GA + +++        +IG  +T +++AG   SA
Sbjct: 72  IPLVVLTSFTFNTLLGEFGAADFSGTGAALGAVN--------QIGPFVTVLVVAGAGASA 123

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + A++GS  I EE+DA+R +GLD +  L+ PR+ A  +   LL+ +   + ++GA +   
Sbjct: 124 MCADLGSRTIREEVDAMRVLGLDPIHSLVVPRVLATTLVAVLLSSVVTVTGLLGAFLFSV 183

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
            +  +    F +       L ++   L+KA       G++A  +G  V   +  +G  V+
Sbjct: 184 YFQHVTPGSFVASMTLITGLGDVLVSLVKATLFGFVAGLIACYQGLRVQKGAAGVGNAVS 243

Query: 348 TCVVQSISIVIIIDSL 363
             VV +  ++ +++++
Sbjct: 244 ETVVIAFLLLFVVNAI 259


>gi|148241576|ref|YP_001226733.1| ABC-type transport system, permease component [Synechococcus sp.
           RCC307]
 gi|147849886|emb|CAK27380.1| ABC-type transport system, permease component [Synechococcus sp.
           RCC307]
          Length = 250

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 112/226 (49%), Gaps = 8/226 (3%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G+  A++ + +  +  L   +   G S   VV++I    G V   Q A +L++ GA    
Sbjct: 20  GQALAAAARGRVPIGELSENLMEAGPSSFLVVLIIGMAAGTVFNIQVAAELTKQGAGSTV 79

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
             ++++   REI  LLTA+++ G+  +A  A +G+MK+ E+IDAI  +  D V  L+ PR
Sbjct: 80  GGILALGLAREIAPLLTAMLLTGKVATAYAASLGTMKVTEQIDAITMLRTDPVEYLVVPR 139

Query: 260 IWALIISLPLLTIL----ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + A+++  P+  +L      +S ++ +S++    Y IP  VF+S   +    +++ + L+
Sbjct: 140 VIAMLVMSPVQCLLFFGIGMWSGMLSSSML----YRIPPPVFWSSMRTWMQPSDVPSMLL 195

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           KA      I I+A   G         +G   T  VV  +  + I D
Sbjct: 196 KATVFGLEIAIIACGWGLTTRGGPKEVGTSTTGAVVMILLTIAITD 241


>gi|108798619|ref|YP_638816.1| hypothetical protein Mmcs_1650 [Mycobacterium sp. MCS]
 gi|119867717|ref|YP_937669.1| hypothetical protein Mkms_1676 [Mycobacterium sp. KMS]
 gi|126434218|ref|YP_001069909.1| hypothetical protein Mjls_1625 [Mycobacterium sp. JLS]
 gi|108769038|gb|ABG07760.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
 gi|119693806|gb|ABL90879.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
 gi|126234018|gb|ABN97418.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 266

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P+V+L SF    ++ + GA   S  GA + +++        +IG  +T +++AG   SA
Sbjct: 69  IPLVVLTSFTFNTLLGEFGAADFSGTGAALGAVN--------QIGPFVTVLVVAGAGASA 120

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + A++GS  I EE+DA+R +GLD +  L+ PR+ A  +   LL+ +   + ++GA +   
Sbjct: 121 MCADLGSRTIREEVDAMRVLGLDPIHSLVVPRVLATTLVAVLLSSVVTVTGLLGAFLFSV 180

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
            +  +    F +       L ++   L+KA       G++A  +G  V   +  +G  V+
Sbjct: 181 YFQHVTPGSFVASMTLITGLGDVLVSLVKATLFGFVAGLIACYQGLRVQKGAAGVGNAVS 240

Query: 348 TCVVQSISIVIIIDSL 363
             VV +  ++ +++++
Sbjct: 241 ETVVIAFLLLFVVNAI 256


>gi|49072908|gb|AAT51759.1| TrnB1 [Mycobacterium vanbaalenii PYR-1]
          Length = 269

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P+V+L SF    ++ + GA   S  GA + +++        +IG  +T +++AG   SA
Sbjct: 72  IPLVVLTSFTFNTLLGEFGAADFSGTGAALGAVN--------QIGPFVTVLVVAGAGASA 123

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + A++GS  I EE+DA+R +GLD +  L+ PR+ A  +   LL+ +   + ++GA +   
Sbjct: 124 MCADLGSRTIREEVDAMRVLGLDPIHSLVVPRVLATTLVAVLLSSVVTVTGLLGAFLFSV 183

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
            +  +    F +       L ++   L+KA       G++A  +G  V   +  +G  V+
Sbjct: 184 YFQHVTPGSFVASMTLITGLGDVLVSLVKATLFGFVAGLIACYQGLRVQKGAAGVGNAVS 243

Query: 348 TCVVQSISIVIIIDSL 363
             VV +  ++ +++++
Sbjct: 244 ETVVIAFLLLFVVNAI 259


>gi|239814162|ref|YP_002943072.1| hypothetical protein Vapar_1155 [Variovorax paradoxus S110]
 gi|239800739|gb|ACS17806.1| protein of unknown function DUF140 [Variovorax paradoxus S110]
          Length = 260

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 114/219 (52%), Gaps = 2/219 (0%)

Query: 155 SLIR-QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
            L+R Q++++G   + ++ +     G V+  Q  + L ++G+      L+++  +RE+G 
Sbjct: 42  GLVRDQIHFLGNYSLAIIAVSGLFVGFVLGLQMYYALQRYGSSEALGLLVALSLVRELGP 101

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           ++ A++  GR+G+++ AEIG MK  E++ A+  M +D V+ +++PR WA +I++PLL  +
Sbjct: 102 VVAALLFTGRAGTSLTAEIGLMKAGEQLSAMEMMAVDPVQRILAPRFWAGVITMPLLAAV 161

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332
            +   I+G  +V      +    F+ +      +  ++  G+IK+      +  +A+ +G
Sbjct: 162 FSAVGIMGGYVVGVLMLGVDPGAFWGQMQGGVDVWRDVGNGVIKSIVFGFTVTFIALLQG 221

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           +        + +  T  VV +   V+ +D L     F+I
Sbjct: 222 YEAQPTPEGVSRATTRTVVMASLSVLGLDFLLTAMMFSI 260


>gi|145221253|ref|YP_001131931.1| hypothetical protein Mflv_0654 [Mycobacterium gilvum PYR-GCK]
 gi|315441852|ref|YP_004074731.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|145213739|gb|ABP43143.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
 gi|315260155|gb|ADT96896.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 269

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P+V+L SF    ++ + GA   S  GA + +++        +IG  +T +++AG   SA
Sbjct: 72  IPLVVLTSFTFNTLLGEFGAADFSGTGAALGAVN--------QIGPFVTVLVVAGAGASA 123

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + A++GS  I EE+DA+R +GLD +  L+ PR+ A  +   LL+ +   + ++GA +   
Sbjct: 124 MCADLGSRTIREEVDAMRVLGLDPIHSLVVPRVLATTLVAVLLSSVVTVTGLLGAFLFSV 183

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
            +  +    F +       L ++   L+KA       G++A  +G  V   +  +G  V+
Sbjct: 184 YFQHVTPGSFVASMTLITGLGDVLVSLVKATLFGFVAGLIACYQGLRVQKGAAGVGNAVS 243

Query: 348 TCVVQSISIVIIIDSL 363
             VV +  ++ +++++
Sbjct: 244 ETVVIAFLLLFVVNAI 259


>gi|300313364|ref|YP_003777456.1| organic solvents resistance ABC transporter permease
           [Herbaspirillum seropedicae SmR1]
 gi|300076149|gb|ADJ65548.1| ABC-type transport system involved in resistance to organic
           solvents, permease component protein [Herbaspirillum
           seropedicae SmR1]
          Length = 259

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 110/195 (56%), Gaps = 3/195 (1%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTA 217
           Q++++G   + ++ +     G V+  QG + L+++G+E  ++ L+  L L RE+G ++TA
Sbjct: 47  QIHFIGNYSLVIIAVSGLFVGFVLGLQGYYTLNKYGSEQ-ALGLLVALSLTRELGPVVTA 105

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++ AGR+G+++ AEIG MK  E++ A+  M ++ ++ +++PR WA +I++P+L  + +  
Sbjct: 106 LLFAGRAGTSLTAEIGLMKAGEQLSAMEMMAVNPLQRVVAPRFWAGVIAMPVLAAIFSAV 165

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFAVG 336
            +IG  +V      +    F+S+      + N I  G++K+     A+  VA+ +G+   
Sbjct: 166 GVIGGYVVGVLLIGVDEGAFWSQMQGGVDVWNDIANGVLKSVVFGVAVTFVALFQGYEAK 225

Query: 337 VHSNSLGKKVTTCVV 351
                + +  T  VV
Sbjct: 226 PTPEGVARATTRTVV 240


>gi|124514232|gb|EAY55746.1| probable ABC transporter, permease protein [Leptospirillum rubarum]
          Length = 261

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/211 (22%), Positives = 103/211 (48%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + Q+ + G+  +P++ ++SF+ G     +   +L + G +     ++  + LR +G   T
Sbjct: 46  LNQILFNGLDALPILTVVSFLVGMGTVAEAGIELPKLGVQNLVGPIILHIILRIVGPFTT 105

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A+++  R+ S++  EIG+M+I+ E+D I  MG +    L++PR++  I+S   L++    
Sbjct: 106 ALIVTARTASSLTVEIGNMRISGELDTIEMMGANISYFLLAPRLFGAIVSTVALSLYFAV 165

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            A IG  ++ +    +P         ++  L ++   L+++      I  V    G  VG
Sbjct: 166 IAFIGGLLIAFFGLSMPIVSLIRALETSINLPDLLIPLVESITYGSIIAAVGSYHGLKVG 225

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
                + ++ T  +V SI +  +  + F +F
Sbjct: 226 DSPTDVPQQTTRALVSSIVLCTLFSTFFLVF 256


>gi|318059765|ref|ZP_07978488.1| ABC-transporter integral membrane protein [Streptomyces sp.
           SA3_actG]
 gi|318075809|ref|ZP_07983141.1| ABC-transporter integral membrane protein [Streptomyces sp.
           SA3_actF]
          Length = 287

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 109/227 (48%), Gaps = 6/227 (2%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
            ++F+ F    I Q +++    +    L+S   GAVIA Q      Q GA+ F+     +
Sbjct: 60  PFQFREF----IEQFWFIASVTILPAALVSIPFGAVIALQVGSLTQQLGAQSFTGGASVL 115

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
             +++   L+ +++IAG  GSAI A++GS KI EE+DA+  MG+  V+ L+ PR+ A + 
Sbjct: 116 AVIQQASPLIVSLLIAGAGGSAICADLGSRKIREELDAMEVMGVSPVQRLVVPRVLATMF 175

Query: 266 SLPLLTILANFSAIIGASIV-IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI 324
              LL  L +    +G   + +   +  P A +   F + A L +++ G +KA       
Sbjct: 176 VALLLNGLVSVVGTLGGYFLNVGLQHGTPGA-YLQSFSALAQLPDLYVGELKALVFGLIA 234

Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           GIVA   G         +G  V   VV +  ++++++      Y  I
Sbjct: 235 GIVAAYRGLNPRGGPKGVGDAVNQSVVITFILLLVVNMAMTAVYLQI 281


>gi|226229261|ref|YP_002763367.1| putative transporter [Gemmatimonas aurantiaca T-27]
 gi|226092452|dbj|BAH40897.1| putative transporter [Gemmatimonas aurantiaca T-27]
          Length = 275

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 108/215 (50%), Gaps = 14/215 (6%)

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           +GV  +P+ I I+  TG V+A   ++ +       F   L+      E+  +LT + +AG
Sbjct: 63  LGVDSLPIGIFIALFTGIVLALLASYSVGDLVPPYFVGTLVQKTITLELAPVLTGLALAG 122

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG- 281
           R G+ I AE+G+M++ E+IDA+ T+  D +  L+ PR+ A  +  P++  +A    ++  
Sbjct: 123 RVGANIAAELGTMRVTEQIDALETLTFDPMSHLVVPRVLASALMFPIVVGMAMLVGLLSG 182

Query: 282 --ASIVIWKYYDIPF----AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             ASIV+       F     +FF  F       ++  GL+K+     A+ ++  + G   
Sbjct: 183 WVASIVLLDIATPQFLKGVRLFFQPF-------DVQYGLVKSASFGAAVALIGCRAGLNT 235

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
              +  +G+  T  VV S  +++++D+ +AI + +
Sbjct: 236 LGGAQGVGRSATRAVVISAVMILVLDAFWAIVWLS 270


>gi|159026095|emb|CAO86324.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 288

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 93/191 (48%), Gaps = 4/191 (2%)

Query: 165 VSGVPVVILISFVTGAVIAQ----QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
           V+  P  ++I+ +T AVI      Q A +    GA      ++++   RE+  ++ A+++
Sbjct: 68  VAAGPASLIIAMITAAVIGMIFTIQVAREFQALGAGSMVGGILALALGRELCPIMMAIVV 127

Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280
           AGR GSA  AEIG+MK+ E+IDA+  +  D V  L+ PR+ A  + +P L+I+A    + 
Sbjct: 128 AGRVGSAFAAEIGTMKVTEQIDALYMLKTDPVEYLVLPRLIACCLMVPALSIMALLIGLG 187

Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
              +V    Y I  +VF         + ++ +G +K       I I+    G      + 
Sbjct: 188 SGLLVGQSLYGIANSVFLDSVRGFLRVGDVLSGPVKGLVFGALIAIIGCNWGLTTDGGAK 247

Query: 341 SLGKKVTTCVV 351
            +G+  T  VV
Sbjct: 248 GVGQATTAAVV 258


>gi|146277114|ref|YP_001167273.1| hypothetical protein Rsph17025_1067 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145555355|gb|ABP69968.1| protein of unknown function DUF140 [Rhodobacter sphaeroides ATCC
           17025]
          Length = 260

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 109/218 (50%), Gaps = 4/218 (1%)

Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211
           FL +LI+    +G   +PVV L +  TG  +A Q     ++F AE     +++I   RE+
Sbjct: 45  FLNALIQ----IGWLSLPVVGLTAIFTGGALALQIYAGGARFSAEAVVPSIVAIGMTREL 100

Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271
           G +L  +M+A R  S+I AEIG+MK+ E+IDA+ T+  + ++ L  PR+ A  +++P+L 
Sbjct: 101 GPVLGGLMVAARVASSIAAEIGTMKVTEQIDALVTLSTNPLKYLAVPRVLAATLAVPVLV 160

Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
            + +   I G  +V     D   A +         + ++ +GL+K       + ++    
Sbjct: 161 AVGDSIGIAGGWLVGVNRLDFNSATYIKNTVDFLEVWDVGSGLVKGAAFGFIVALMGCYH 220

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           G   G  +  +G+   + VV +  +++  + L    +F
Sbjct: 221 GMNSGRGAQGVGRATKSAVVAASVLILAANYLLTEVFF 258


>gi|302523371|ref|ZP_07275713.1| ABC-transporter integral membrane protein [Streptomyces sp. SPB78]
 gi|302432266|gb|EFL04082.1| ABC-transporter integral membrane protein [Streptomyces sp. SPB78]
          Length = 253

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 109/227 (48%), Gaps = 6/227 (2%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
            ++F+ F    I Q +++    +    L+S   GAVIA Q      Q GA+ F+     +
Sbjct: 26  PFQFREF----IEQFWFIASVTILPAALVSIPFGAVIALQVGSLTQQLGAQSFTGGASVL 81

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
             +++   L+ +++IAG  GSAI A++GS KI EE+DA+  MG+  V+ L+ PR+ A + 
Sbjct: 82  AVIQQASPLIVSLLIAGAGGSAICADLGSRKIREELDAMEVMGVSPVQRLVVPRVLATMF 141

Query: 266 SLPLLTILANFSAIIGASIV-IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI 324
              LL  L +    +G   + +   +  P A +   F + A L +++ G +KA       
Sbjct: 142 VALLLNGLVSVVGTLGGYFLNVGLQHGTPGA-YLQSFSALAQLPDLYVGELKALVFGLIA 200

Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           GIVA   G         +G  V   VV +  ++++++      Y  I
Sbjct: 201 GIVAAYRGLNPRGGPKGVGDAVNQSVVITFILLLVVNMAMTAVYLQI 247


>gi|126740431|ref|ZP_01756119.1| membrane protein [Roseobacter sp. SK209-2-6]
 gi|126718567|gb|EBA15281.1| membrane protein [Roseobacter sp. SK209-2-6]
          Length = 260

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 113/224 (50%), Gaps = 23/224 (10%)

Query: 145 SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204
             Y  +  LLSL++    VG   +PVV L +  TG  +A Q     ++F AE     +++
Sbjct: 38  PPYYPREVLLSLLQ----VGWLSLPVVGLTAVFTGGALALQIYAGGARFNAEAVVPQIVA 93

Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264
           I  +RE+G +L  +MIA R  S+I AEI +MK+ E+IDA+ T+  + ++ L++PR+ A +
Sbjct: 94  IGMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQIDALVTLSTNPMQYLVAPRVLAAL 153

Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN---------IFTGLI 315
           +++P+L  + +   I G   V         AV+   F+S A L N         + + L+
Sbjct: 154 VTVPVLVGVGDIIGIAGGYTV---------AVYNLDFNSAAYLKNTVDFLEPLDLISSLV 204

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           K  F       +    G   G  +  +G+  T   V++ +++I+
Sbjct: 205 KGAFFGTIAATMGCYYGMQSGRGAQGVGRA-TKSSVEAAAVLIL 247


>gi|89068948|ref|ZP_01156330.1| membrane protein [Oceanicola granulosus HTCC2516]
 gi|89045529|gb|EAR51593.1| membrane protein [Oceanicola granulosus HTCC2516]
          Length = 258

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 114/229 (49%), Gaps = 18/229 (7%)

Query: 156 LIRQMYY----------VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
           L+R  +Y          VG   +PVV L +F TG  +A Q     ++F AE     ++++
Sbjct: 33  LVRPPFYAREFGHAVMSVGWQSLPVVGLTAFFTGGALALQIYSGGARFSAEALVPQIVAV 92

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
             +RE+G +L  +MIA R  S+I AEI +MK+ E++DA+ T+  + ++ L  PR+ A ++
Sbjct: 93  GMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQLDALVTLSTNPMKYLTLPRVLAALL 152

Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325
           ++P+L  + +   I G  +V     D   A + +         ++ + L+K      A G
Sbjct: 153 TVPVLVAVGDVIGIFGGYLVGIYRLDFNPANYITNTVDFLEAHDVISSLVK----GGAFG 208

Query: 326 IVAMKEGFAVGVHSN----SLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           ++A   G   G+ S+     +G+   T VV +  +++  + L    +F+
Sbjct: 209 LIAALTGCYYGMQSDRGAQGVGRATKTAVVVAAVLILAANFLLTEAFFS 257


>gi|157413886|ref|YP_001484752.1| putative transporter, membrane component [Prochlorococcus marinus
           str. MIT 9215]
 gi|254526072|ref|ZP_05138124.1| ABC-type transport system involved in resistance to organic
           solvents permease component [Prochlorococcus marinus
           str. MIT 9202]
 gi|157388461|gb|ABV51166.1| possible transporter, membrane component [Prochlorococcus marinus
           str. MIT 9215]
 gi|221537496|gb|EEE39949.1| ABC-type transport system involved in resistance to organic
           solvents permease component [Prochlorococcus marinus
           str. MIT 9202]
          Length = 251

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 7/220 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L  Q+   G   + +V++     G V   Q A QL+  G       L+++   RE+  LL
Sbjct: 34  LFEQLMESGPGSLLIVLITGIAAGTVFNIQVASQLTSMGVSSEIGGLLAVGMAREMAPLL 93

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA ++ G+  +A  A++G+MK+ E+I+AI  +  + V+ L+ PR+ +++I  P+  +L  
Sbjct: 94  TATLMTGKVATAYAAQLGTMKVTEQIEAITMLRTEPVQYLVVPRLLSMVIMSPIQCLL-- 151

Query: 276 FSAIIGASIVIWK--YYDIPFAVFFSRFHS---TATLANIFTGLIKAPFMACAIGIVAMK 330
           F ++   S  IW   +Y +P  VF++   S   + T A++ + LIK+      I I+A  
Sbjct: 152 FLSVALWSGQIWSTIFYKVPPIVFWTSVRSGNVSLTSADLTSMLIKSVVFGLLISIIACG 211

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            G         +G   T  VV ++  V ++D L     F 
Sbjct: 212 YGLTTKGGPKEVGTSTTGAVVMTLVTVSLMDVLLTQILFG 251


>gi|78779806|ref|YP_397918.1| putative transporter, membrane component [Prochlorococcus marinus
           str. MIT 9312]
 gi|78713305|gb|ABB50482.1| Protein of unknown function DUF140 [Prochlorococcus marinus str.
           MIT 9312]
          Length = 251

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 7/220 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L  Q+   G   + +V++     G V   Q A QL+  G       L+++   RE+  LL
Sbjct: 34  LFEQLMESGPGSLLIVLITGIAAGTVFNIQVASQLTSMGVSSEIGGLLAVGMAREMAPLL 93

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA ++ G+  +A  A++G+MK+ E+IDAI  +  + ++ L+ PR+ +++I  P+  +L  
Sbjct: 94  TATLMTGKVATAYAAQLGTMKVTEQIDAITMLRTEPIQYLVVPRLLSMVIMSPIQCLL-- 151

Query: 276 FSAIIGASIVIWK--YYDIPFAVFFSRFHS---TATLANIFTGLIKAPFMACAIGIVAMK 330
           F ++   S  IW   +Y +P  VF++   S   + T  ++ + LIK+      I I+A  
Sbjct: 152 FLSVALWSGQIWSTIFYKVPPIVFWTSVRSGNVSLTSTDLTSMLIKSVVFGLIISIIACG 211

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            G         +G   T  VV ++  V ++D L     F 
Sbjct: 212 YGLTTKGGPKEVGTSTTGAVVMTLVTVSLMDVLLTQILFG 251


>gi|189462219|ref|ZP_03011004.1| hypothetical protein BACCOP_02902 [Bacteroides coprocola DSM 17136]
 gi|189431072|gb|EDV00057.1| hypothetical protein BACCOP_02902 [Bacteroides coprocola DSM 17136]
          Length = 246

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 117/242 (48%), Gaps = 20/242 (8%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  +   G   A   +F+ +L     +M  +G++ + +V+LISF  GAVI  Q    + 
Sbjct: 8   LGKYLMLMGRVFARPERFRMYLKQYRNEMAQLGINSIGIVLLISFFIGAVICIQIKLNIE 67

Query: 192 QFGAEIFSIDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
                 F +   +    REI +L     +  +++AG+ GS I +EIG+M++ ++IDA+  
Sbjct: 68  SPWMPRFVVGYTT----REILLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALDI 123

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAVFFSRF 301
           MG++    LI P+I  L+  +PLL   + F+ +IGA    W        D+ +      F
Sbjct: 124 MGVNSASYLILPKILGLMTMIPLLVTFSIFAGVIGAFCTAWFAGITNATDLEYG-----F 178

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
             +     ++   IK+   A  I  V+   G+ V   S ++GK  T  VV S S++I+  
Sbjct: 179 QYSFVEWYVWCSFIKSLVFAFIIASVSAYFGYTVEGGSIAVGKASTDSVVCS-SVLILFS 237

Query: 362 SL 363
            L
Sbjct: 238 DL 239


>gi|313886966|ref|ZP_07820667.1| conserved hypothetical protein [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|312923573|gb|EFR34381.1| conserved hypothetical protein [Porphyromonas asaccharolytica
           PR426713P-I]
          Length = 251

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 115/227 (50%), Gaps = 9/227 (3%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           K+  F   LIR+M   G+  + +V++ISF  G VI  Q +  +S      F+I       
Sbjct: 28  KWGIFFKQLIREMAKYGLDSIWIVVIISFFIGTVITIQLSINMSSPLIPRFTIGYAG--- 84

Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
            REI  L     +  +++AG+ GS+I +E+ +M++ E+IDA+  MG++    LI P+I  
Sbjct: 85  -REIMFLEFSSSIMCLILAGKVGSSIASELATMRVTEQIDAMEIMGVNSANFLILPKILG 143

Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322
           L++ +P+L++++  + ++G  +  +    I  + F     +   + NIF  +IK+   A 
Sbjct: 144 LMLFIPVLSVISMATGLVGGYLATFFIPSITPSDFEMGLQTFFVVKNIFYSIIKSLVYAF 203

Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
            I   A   G+ V   +  +G+  T  VV S  ++++ D +     F
Sbjct: 204 IISSGASYFGYTVKGGALGVGRASTNAVVSSCVLILLADVMLTSLLF 250


>gi|166365969|ref|YP_001658242.1| hypothetical protein MAE_32280 [Microcystis aeruginosa NIES-843]
 gi|166088342|dbj|BAG03050.1| hypothetical protein MAE_32280 [Microcystis aeruginosa NIES-843]
          Length = 268

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 4/191 (2%)

Query: 165 VSGVPVVILISFVTGAVIAQ----QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
           V+  P  ++I+ +T AVI      Q A +    GA      ++++   RE+  ++ A+++
Sbjct: 48  VAAGPASLIIAMITAAVIGMIFTIQVAREFQALGAGSMVGGILALALGRELCPIMMAIVV 107

Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280
           AGR GSA  AEIG+MK+ E+IDA+  +  D V  L+ PR+ A  + +P L+++A    + 
Sbjct: 108 AGRVGSAFAAEIGTMKVTEQIDALYMLKTDPVEYLVLPRLIACCLMVPALSVMALLIGLG 167

Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
              +V    Y I  +VF         + ++ +G +K       I I+    G      + 
Sbjct: 168 SGLLVGQSLYGIANSVFLDSVRGFLGVGDVLSGPVKGVVFGALIAIIGCNWGLTTDGGAK 227

Query: 341 SLGKKVTTCVV 351
            +G+  T  VV
Sbjct: 228 GVGQATTAAVV 238


>gi|154494356|ref|ZP_02033676.1| hypothetical protein PARMER_03711 [Parabacteroides merdae ATCC
           43184]
 gi|154085800|gb|EDN84845.1| hypothetical protein PARMER_03711 [Parabacteroides merdae ATCC
           43184]
          Length = 248

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 125/245 (51%), Gaps = 24/245 (9%)

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
           H +G  +   G+  +   ++  F   LI+++Y +GV  + +V++IS   G VIA Q +  
Sbjct: 6   HQVGEYVMLMGKCISVPNRWSMFFKQLIKEIYKLGVDSLWIVVIISIFIGTVIAIQISLN 65

Query: 190 LSQFGAEIFSIDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           +S      F+I   +    REI +L     + ++++AG+ GS I +EIG+M++ E+IDA+
Sbjct: 66  ISSPLIPKFTIGYTT----REIILLEFSSSIMSLILAGKVGSNIASEIGTMRVTEQIDAM 121

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG--------ASIVIWKYYDIPFAV 296
             MG++    LI P++  ++  +P+L I + F+ I+G         + +    ++     
Sbjct: 122 EIMGVNSANFLILPKMVGMMTFIPVLVIFSMFTGILGGIAASHSTGTGMTPASFEYGLQF 181

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +F+ F+       I+  +IK+   A  I  +A   G+ V   +  +GK  T  VV S  +
Sbjct: 182 YFNEFY-------IWYSIIKSVVYAFIISSIAAYFGYNVKGGALEVGKASTNAVVMSSIM 234

Query: 357 VIIID 361
           +++ D
Sbjct: 235 ILLAD 239


>gi|332177068|gb|AEE12758.1| protein of unknown function DUF140 [Porphyromonas asaccharolytica
           DSM 20707]
          Length = 251

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 113/219 (51%), Gaps = 9/219 (4%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           K+  F   LIR+M   G+  + +V++ISF  G VI  Q +  +S      F+I       
Sbjct: 28  KWGIFFKQLIREMAKYGLDSIWIVVIISFFIGTVITIQLSINMSSPLIPRFTIGYAG--- 84

Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
            REI  L     +  +++AG+ GS+I +E+ +M++ E+IDA+  MG++    LI P+I  
Sbjct: 85  -REIMFLEFSSSIMCLILAGKVGSSIASELATMRVTEQIDAMEIMGVNSANFLILPKILG 143

Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322
           L++ +P+L++++  + ++G  +  +    I  + F     +   + NIF  +IK+   A 
Sbjct: 144 LMLFIPVLSVISMATGLVGGYLATFFIPSITPSDFEMGLQTFFVVKNIFYSIIKSLVYAF 203

Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            I   A   G+ V   +  +G+  T  VV S  ++++ D
Sbjct: 204 IISSGASYFGYTVKGGALGVGRASTNAVVSSCVLILLAD 242


>gi|206602875|gb|EDZ39356.1| Probable ABC transporter, permease protein [Leptospirillum sp.
           Group II '5-way CG']
          Length = 261

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/211 (22%), Positives = 104/211 (49%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + Q+ + G+  +P++ ++SF+ G     +   +L + G +     ++  + LR +G   T
Sbjct: 46  LNQILFNGLDALPILTVVSFLVGMGTVAEAGIELPKLGVQNLVGPIILHIILRIVGPFTT 105

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A+++  R+ S++  EIG+M+I+ E+D I  MG +    L++PR++  I+S   L++    
Sbjct: 106 ALIVTARTASSLTVEIGNMRISGELDTIEMMGANISYFLLAPRLFGAIVSTVALSLYFAV 165

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            A +G  ++ +    +P         ++  L+++   L+++      I  V    G  VG
Sbjct: 166 IAFLGGLLIAFFGLSMPIVSLIRALETSINLSDLLIPLVESITYGSIIAAVGSYHGLKVG 225

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
                + ++ T  +V SI +  +  + F +F
Sbjct: 226 DSPADVPQQTTRALVSSIVLCTLFSTFFLVF 256


>gi|282880876|ref|ZP_06289569.1| conserved hypothetical protein [Prevotella timonensis CRIS 5C-B1]
 gi|281305258|gb|EFA97325.1| conserved hypothetical protein [Prevotella timonensis CRIS 5C-B1]
          Length = 250

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 113/229 (49%), Gaps = 30/229 (13%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           + + F    I++M  +GV  +P+V+LISF  GAVI  Q    +       ++   ++   
Sbjct: 29  RMRMFFKQYIKEMTKLGVDSIPLVLLISFFIGAVICIQMKINVQSPWMPRWTTGYVT--- 85

Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
            REI +L        +++AG+ GS I +E+G+M++ ++IDA+  MG++    LI P+I  
Sbjct: 86  -REILLLEFSSAFMCLILAGKIGSNIASELGTMRVTQQIDALDIMGVNPACYLILPKIMG 144

Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN----------IFT 312
           LI  +P L I ++ + +IGA           +A  +S   S A L            I+ 
Sbjct: 145 LITIMPFLVIFSSVAGMIGA-----------YATAYSGVLSPADLTTGLQYSFKVWFIWM 193

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            +IK+   A  I  V+   GF+V   + ++G+  T  VV S  +V+  D
Sbjct: 194 SIIKSLVFAFIIASVSSYYGFSVEGGAVAVGEASTNAVVSSSVLVLFAD 242


>gi|124022277|ref|YP_001016584.1| transporter membrane component [Prochlorococcus marinus str. MIT
           9303]
 gi|123962563|gb|ABM77319.1| possible transporter, membrane component [Prochlorococcus marinus
           str. MIT 9303]
          Length = 248

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 110/231 (47%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G+  A++ + +   + L  Q+   G     +V++     G V   Q A +LS+ GA    
Sbjct: 18  GQAVAATARGRINKVDLFDQLMEAGPGSFLIVLITGLAAGTVFNIQVAAELSRQGAGSTV 77

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
             +++I   REI  LLTA ++ G+  +A  A++G+MK+ E+IDAI  +  + V  L+ PR
Sbjct: 78  GGILAIGMAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTEPVEYLVVPR 137

Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319
           + A+++  P+  +L    A+    +     Y IP  VF++   +  T  ++   L+K+  
Sbjct: 138 VIAMVVMAPVQCMLFFGIALWSGQVSSTNLYQIPPEVFWNSVRTWLTPDDMPFMLVKSLV 197

Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               I +++   G         +G   T  VV ++  V ++D L     F+
Sbjct: 198 FGLQIAVLSCGWGLTTRGGPKEVGTSTTGAVVMTLVTVSLMDVLLTQILFS 248


>gi|288803886|ref|ZP_06409311.1| ABC transporter, permease [Prevotella melaninogenica D18]
 gi|302345895|ref|YP_003814248.1| hypothetical protein HMPREF0659_A6184 [Prevotella melaninogenica
           ATCC 25845]
 gi|288333651|gb|EFC72101.1| ABC transporter, permease [Prevotella melaninogenica D18]
 gi|302149082|gb|ADK95344.1| conserved hypothetical protein [Prevotella melaninogenica ATCC
           25845]
          Length = 248

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 111/224 (49%), Gaps = 14/224 (6%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSIL 206
           + + FL   +++M  +GV  + +V+LISF  GAVI  Q    + S +     S  +   +
Sbjct: 26  RMRMFLKRYVKEMSQLGVDSIGIVLLISFFIGAVICIQIKLNVQSPWMPHWVSGYVTREI 85

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            L E    +  ++++G+ GS I +E+G+M++ ++IDA+  MG++    LI P+I  LI  
Sbjct: 86  MLLEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALEIMGINSASYLILPKIMGLITI 145

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT------GLIKAPFM 320
           +P L I +  + IIGA      Y     A   +    TA L + F        +IK  F 
Sbjct: 146 MPFLVIFSAATGIIGA------YATAYLAHIITPVDLTAGLQHDFNPWFMWMSIIKGFFF 199

Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A  I  V+   G+ V   S  +GK  T  VV S S++I+   +F
Sbjct: 200 AFIISSVSSYMGYTVKGGSVEVGKASTDAVVCS-SVLILFSDVF 242


>gi|307564910|ref|ZP_07627431.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A]
 gi|307346383|gb|EFN91699.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A]
          Length = 248

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 111/218 (50%), Gaps = 2/218 (0%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSIL 206
           + + F  S +R+M  +GV+ + +V+LISF  GAVI  Q    + S +     S  +   +
Sbjct: 26  RMRMFFKSYVREMSQLGVNSIGIVLLISFFIGAVICIQIRLNVQSPWMPHWVSGYVTREI 85

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            L E    +  ++++G+ GS I +E+GSM++ ++IDA+  MG++    LI P+I  L+  
Sbjct: 86  MLLEFSSSIMCLILSGKVGSNIASELGSMRVTQQIDALEIMGINSASYLILPKILGLMTL 145

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326
           +P L I +    ++GA    +  + I  A              ++  ++K  F A  I  
Sbjct: 146 MPFLVIFSAAIGMVGAYSTAYIGHVISPADLTEGVQHHFNQWFMWMSILKGFFFAFIISS 205

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           V+   G++V   S  +GK  T  VV+S S++I+   +F
Sbjct: 206 VSSYMGYSVKGGSQEVGKASTDAVVKS-SVLILFSDVF 242


>gi|83816537|ref|YP_446599.1| hypothetical protein SRU_2501 [Salinibacter ruber DSM 13855]
 gi|294508531|ref|YP_003572590.1| Conserved hypothetical protein, membrane, containing DUF140 domain
           [Salinibacter ruber M8]
 gi|83757931|gb|ABC46044.1| domain of unknown function superfamily [Salinibacter ruber DSM
           13855]
 gi|294344860|emb|CBH25638.1| Conserved hypothetical protein, membrane, containing DUF140 domain
           [Salinibacter ruber M8]
          Length = 250

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 85/149 (57%), Gaps = 1/149 (0%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           S    LG   +  G   AS  K   +  +L  QM  VG+  +P+V L +  TGAV   Q 
Sbjct: 7   SPFRALGRYATLMGRAFASIDKVGTYWNNLFIQMVRVGIDSIPIVALAAAFTGAVFTVQT 66

Query: 187 AFQL-SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           A+QL + F  +     +++   + E+G ++   ++AGR G+ I AE+G+M+++E+IDA+ 
Sbjct: 67  AYQLETPFIPKTIIGSIVAPSIMLELGAVIAGFILAGRVGARIAAELGTMRVSEQIDALE 126

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILA 274
            MGL+ V  L+ PR+ A ++  P+L +++
Sbjct: 127 VMGLNSVGFLVLPRVLAGVLMFPVLYVVS 155


>gi|262195117|ref|YP_003266326.1| hypothetical protein Hoch_1886 [Haliangium ochraceum DSM 14365]
 gi|262078464|gb|ACY14433.1| protein of unknown function DUF140 [Haliangium ochraceum DSM 14365]
          Length = 328

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 95/200 (47%)

Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221
           Y+G   +P+++L+   TGAV+A Q  F    FG E     +       E+  +L A+M+ 
Sbjct: 110 YIGFGSLPIILLVGLFTGAVMALQSVFAFRDFGLESMVGGVTGKALATELAPVLAALMLT 169

Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281
           GR+ + I  E+G+M+I+E+IDA+ +M ++ ++ L+ PR+ A     P+LT++     + G
Sbjct: 170 GRAAAGIATELGTMRISEQIDALESMAVNPIQFLVLPRLVAGFFMAPILTLIFFVIGMGG 229

Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341
           A  V      +    F           ++  G++K+      + ++   +GF        
Sbjct: 230 AYFVSVISEGVDHGQFVHNTKDILNFVDVLQGILKSAVFGFVVVLIGCYQGFFASGGGRG 289

Query: 342 LGKKVTTCVVQSISIVIIID 361
           +G   T  VV     V+I D
Sbjct: 290 VGLGTTRAVVIGSVTVLITD 309


>gi|206889329|ref|YP_002249685.1| ABC transporter permease protein [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206741267|gb|ACI20324.1| ABC transporter permease protein [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 223

 Score = 76.6 bits (187), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 102/205 (49%), Gaps = 1/205 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +RQ+Y+ G+  VP V +   + G +I  Q A  ++  G+      ++  L L+EIG   T
Sbjct: 9   LRQIYFTGIQAVPAVTISGLLIGLIIVLQTA-SIAGTGSSNMIGKILLWLVLKEIGPFFT 67

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
            ++I  RSGSAI  E+ +MK+  EI+ +  MG+     LI PR++ ++ S  +L+I    
Sbjct: 68  GLIILTRSGSAIATELATMKLGREIEYLEAMGIKPEVYLIKPRLYGVVCSAVILSIYFQL 127

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           +A+ G   +      IPF+ + +      ++  I    +K+      I ++ + +G +V 
Sbjct: 128 TAMFGGVFLATLMSGIPFSDYANAIVFHLSIKEIVISFLKSLIFGFLISLICIWQGLSVM 187

Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361
                + ++ T  V  S+  + +ID
Sbjct: 188 KSPTEIPQRATKAVTGSLFSLFLID 212


>gi|224025978|ref|ZP_03644344.1| hypothetical protein BACCOPRO_02729 [Bacteroides coprophilus DSM
           18228]
 gi|224019214|gb|EEF77212.1| hypothetical protein BACCOPRO_02729 [Bacteroides coprophilus DSM
           18228]
          Length = 247

 Score = 76.6 bits (187), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 109/226 (48%), Gaps = 19/226 (8%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  +   G   A   + + +    I +M  +G++ + +V+LISF  GAVI  Q    + 
Sbjct: 8   LGKYLMLMGRVFARPERIRMYFKQYINEMVQLGINSIGIVLLISFFIGAVICIQIKLNIE 67

Query: 192 QFGAEIFSIDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
                 F +   +    REI +L     +  +++AG+ GS I +EIG+M++ ++IDA+  
Sbjct: 68  SPWMPRFVVGYTT----REILLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALEI 123

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAVFFSRF 301
           MG++    LI P+I  L+  +PLL I + F+ IIGA    W        D+ + + +   
Sbjct: 124 MGINSASYLILPKILGLMTIIPLLVIFSIFAGIIGAFCTAWFAGIMNATDLEYGLQYCFI 183

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
                   I+   IK+ F A  I  V+   G+ V   S ++GK  T
Sbjct: 184 E-----WYIWCSFIKSLFFAFIIASVSAYFGYTVEGGSIAVGKAST 224


>gi|260590590|ref|ZP_05856048.1| ABC transporter, permease [Prevotella veroralis F0319]
 gi|260537463|gb|EEX20080.1| ABC transporter, permease [Prevotella veroralis F0319]
          Length = 248

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 123/254 (48%), Gaps = 21/254 (8%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I+K++N   +   ++G  +S          + + F    +++M  +GV  + +V+LISF 
Sbjct: 3   IIKWLNTFGNYLMLMGRSLSR-------PERMRMFFKRYLKEMSQLGVDSIGIVLLISFF 55

Query: 178 TGAVIAQQGAFQL-SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
            GAVI  Q    + S +     S  +   + L E    +  ++++G+ GS I +E+G+M+
Sbjct: 56  IGAVICIQIKLNVQSAWMPHWVSGYVTREIMLLEFSSSIMCLILSGKVGSNIASELGTMR 115

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           + ++IDA+  MG++    LI P+I  L+  +P L I +  + IIGA      Y    FA 
Sbjct: 116 VTQQIDALEIMGINSASYLILPKILGLMTIMPFLVIFSAATGIIGA------YATAYFAH 169

Query: 297 FFSRFHSTATLANIFT------GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
             +    TA L + F        +IK  F A  I  V+   G+ V   S  +GK  T  V
Sbjct: 170 IITPVDLTAGLQHDFNPWFMWMSIIKGFFFAFIISSVSSYMGYTVKGGSVEVGKASTDAV 229

Query: 351 VQSISIVIIIDSLF 364
           V S S++I+   +F
Sbjct: 230 VCS-SVLILFSDVF 242


>gi|262202881|ref|YP_003274089.1| hypothetical protein Gbro_2988 [Gordonia bronchialis DSM 43247]
 gi|262086228|gb|ACY22196.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247]
          Length = 285

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 109/215 (50%), Gaps = 6/215 (2%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           IRQ  ++  + V   +L++   G +++ Q +    Q GA  FS     +  +R+   L+T
Sbjct: 65  IRQCAFMSSTSVFPTLLVAIPIGVIVSIQVSNIAGQIGATSFSGAATGLGVIRQGAPLVT 124

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPLLTILAN 275
           ++++AG  GSAI A++GS  I +EIDA+R MG++ ++ LISPR+ A +++S  L   +  
Sbjct: 125 SLLLAGAVGSAIAADLGSRTIRDEIDAMRVMGVNPIQRLISPRLLATMVVSFLLCGFVCF 184

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              I G +  ++     P   +   F S A+ +++   L KA      + +VA   G + 
Sbjct: 185 VGFITGYAFNVYFQGGTP-GSYTGTFASFASTSDLLFALGKAVIFGAIVAVVACDRGLST 243

Query: 336 GVHSNSLGKKVTTCVVQSI----SIVIIIDSLFAI 366
                 +   V   VV S+    ++ +I+  LFAI
Sbjct: 244 KGGPAGVANSVNAAVVNSVLLLFTVNVILTQLFAI 278


>gi|121603597|ref|YP_980926.1| hypothetical protein Pnap_0686 [Polaromonas naphthalenivorans CJ2]
 gi|120592566|gb|ABM36005.1| protein of unknown function DUF140 [Polaromonas naphthalenivorans
           CJ2]
          Length = 260

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 111/218 (50%), Gaps = 8/218 (3%)

Query: 148 KFKGFLLSLIR-QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206
            FK F   L+R Q++++G   + ++ +     G V   QG + L +FG+      L++  
Sbjct: 37  SFKRF--GLVRDQIHFLGNYSLVIIAISGLFVGFVFGLQGYYTLLRFGSTEALGQLVTFT 94

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            +RE+G ++TA++ AGR+G+++ AEIG MK  E+I  +  M +D ++ +++PR W  +I+
Sbjct: 95  LVRELGPVVTALLFAGRAGTSLTAEIGLMKAGEQISVMEMMAVDPIQRILAPRFWGGVIT 154

Query: 267 LPLLTILANFSAIIGASIVIWK--YYDIPFAVFFSRFH-STATLANIFTGLIKAPFMACA 323
           +PLL   A FSA+      +       +    F+S+   S     ++  G++K+      
Sbjct: 155 MPLLA--AVFSAMGVIGGWVVGVLMLGVDSGSFWSQIQGSVDVWRDVGNGIVKSIVFGFT 212

Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           +  +A+ +GF        +    T  VV +   V+ +D
Sbjct: 213 VTFIALLQGFEAQPTPEGVASATTRTVVVASLAVLALD 250


>gi|255693535|ref|ZP_05417210.1| ABC transporter, permease [Bacteroides finegoldii DSM 17565]
 gi|260620673|gb|EEX43544.1| ABC transporter, permease [Bacteroides finegoldii DSM 17565]
          Length = 247

 Score = 76.3 bits (186), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 117/226 (51%), Gaps = 23/226 (10%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           + + F    + ++  +GV+ + +V+LISF  GAVI  Q    +       +++  ++   
Sbjct: 24  RMRMFFRQYLNELEQLGVNSIGIVLLISFFIGAVITIQIKLNIESPWMPRWTVGYVT--- 80

Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
            REI +L     +  +++AG+ GS I +E+G+M++ ++IDA+  MG++    LI P+I A
Sbjct: 81  -REIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGVNSANYLILPKITA 139

Query: 263 LIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAV--FFSRFHSTATLANIFTGLI 315
           ++  +P+L   + F+ IIGA    W        D+ + +   F+ +        I+ G+I
Sbjct: 140 MVTVIPILVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQYMFNEWF-------IWAGII 192

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           K+ F A  I  V+   G+ V   S ++GK  T  VV S  +++  D
Sbjct: 193 KSLFFAFIIASVSAFFGYTVDGGSIAVGKASTDSVVSSSVLILFAD 238


>gi|149913819|ref|ZP_01902351.1| ABC transporter, inner membrane subunit [Roseobacter sp. AzwK-3b]
 gi|149812103|gb|EDM71934.1| ABC transporter, inner membrane subunit [Roseobacter sp. AzwK-3b]
          Length = 261

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 100/203 (49%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +PVV + +  TG  +A Q     ++F AE     +++I   RE+G +L  +M+A R  S+
Sbjct: 58  LPVVGMTALFTGGALALQIYAGGARFNAETVVPSIVAIGLTRELGPVLGGLMVAARVASS 117

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I AEIG+MK+ E+IDA+ T+  + ++ L  PR+ A  +++PLL  + +   I+G  +V  
Sbjct: 118 IAAEIGTMKVTEQIDALTTLSTNPMKYLTLPRVLAATLAVPLLVGVGDVIGIMGGFLVGV 177

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
              D     +           ++ +G+IK       + ++    G   G  +  +G+   
Sbjct: 178 GRLDFGAGTYLHNTLDFLETWDVVSGMIKGAVFGFIVALMGCYYGMNSGRGAQGVGRATK 237

Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370
             VV +  +++  + +    +F+
Sbjct: 238 AAVVAASVLILASNYILTELFFS 260


>gi|254392558|ref|ZP_05007736.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|197706223|gb|EDY52035.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
          Length = 255

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 110/247 (44%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           S +  H  G   + T E   S ++    L   I Q ++V    +    L+S   GAVIA 
Sbjct: 3   SLASLHETGRFFALTAEIVRSVFRRPFQLREFIEQFWFVASVTILPAALVSIPFGAVIAL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      Q GA+ F+     +  +++   L+ A++IAG  GSAI A++GS KI EE+DA+
Sbjct: 63  QVGSLTQQLGAQSFTGGASVLAVIQQASPLIVALLIAGAGGSAICADLGSRKIREELDAM 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  ++ L+ PR+ A ++   LL  + +    +G         D     + + F + 
Sbjct: 123 EVMGVSPIQRLVVPRVLATMLVAFLLNGMISVVGTLGGYFFNVIMQDGTPGAYLASFSAL 182

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A L +++    KA       G+VA   G         +G  V   VV +  ++  ++ + 
Sbjct: 183 AQLPDLYISEFKALVFGFIAGVVAAHRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMII 242

Query: 365 AIFYFAI 371
              Y  +
Sbjct: 243 TAIYLQV 249


>gi|258647414|ref|ZP_05734883.1| ABC transporter, permease [Prevotella tannerae ATCC 51259]
 gi|260852782|gb|EEX72651.1| ABC transporter, permease [Prevotella tannerae ATCC 51259]
          Length = 248

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 2/218 (0%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSIL 206
           +++ F    +++M  +GV  + +V+LISF  GAVI  Q    + S +     S  +   +
Sbjct: 26  RWRMFGKQYLKEMAQLGVDSIGIVLLISFFIGAVICIQIKLNIQSAWMPTWVSGYVTREI 85

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            L E    +  ++++G+ GS I +E+G+M+  ++IDA+  MG++    LI P+I  L+  
Sbjct: 86  MLLEFSSSIMCLILSGKVGSNIASELGTMRTTQQIDALEIMGVNSASFLILPKILGLVTM 145

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326
           +PLL I +  S I+GA    +  + I      +           + G IK+ F A  I  
Sbjct: 146 IPLLVIFSTASGIVGAYATAYIGHIITATDLTAGMQHDFAPWFFWMGTIKSLFFAFIIAS 205

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           V+   G+ V   S  +GK  T  VV S S++I+   LF
Sbjct: 206 VSSFYGYTVEGGSIEVGKASTNAVV-SCSMLILFSDLF 242


>gi|312888399|ref|ZP_07747975.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM
           18603]
 gi|311299233|gb|EFQ76326.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM
           18603]
          Length = 243

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 110/215 (51%), Gaps = 1/215 (0%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSIL 206
           KF  +   ++R+M  +G+  + ++ +IS   GAV   Q AFQL S F  +     +    
Sbjct: 21  KFSVYWAEVMREMVSIGLGSLGIISIISVFIGAVATIQTAFQLVSDFIPKTIVGTITRDS 80

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            + E    ++A+++AGR GS+I ++IG+M++ E+IDA+  MG++    LISP+I + ++ 
Sbjct: 81  TILEFSPTISALVLAGRVGSSIASQIGTMRVTEQIDALEIMGVNAPGYLISPKIISGVLM 140

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326
           +PLLT+++    ++G  I      ++  A + +          +   ++KA F    I  
Sbjct: 141 IPLLTVISISLGLLGGYIACAASSEVSTADYITGLTDGFKTIILQVSMVKATFFGFIITS 200

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           +   +GF     +  +G+  T  VV S   ++  D
Sbjct: 201 ICAYQGFYTSGGALEVGQSATRGVVFSCIFILFAD 235


>gi|159044922|ref|YP_001533716.1| hypothetical protein Dshi_2379 [Dinoroseobacter shibae DFL 12]
 gi|157912682|gb|ABV94115.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
          Length = 258

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 7/186 (3%)

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           +G   +PVV L +F TG  +A Q     ++F AE     +++I  +RE+G +L  +MIA 
Sbjct: 50  IGYFSLPVVGLTAFFTGGALALQIYAGGARFSAEAVVPQIVAIGMVRELGPVLGGLMIAA 109

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           R  S+I AEI +MK+ E+IDA+ T+    ++ L +PR+ A I+ +PLL  + +   I+G 
Sbjct: 110 RVTSSIAAEIATMKVTEQIDALVTLSTHPMKYLTAPRVLAAILVVPLLVAVGDTIGIMGG 169

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK-------APFMACAIGIVAMKEGFAV 335
            +V         A +         L +I + L K       A  M C  G+ + +    V
Sbjct: 170 YLVSTSRLGFNPATYLQNTVDFLELHDIVSSLAKGAVFGAIAALMGCYSGMNSGRGAQGV 229

Query: 336 GVHSNS 341
           G  + S
Sbjct: 230 GAATKS 235


>gi|150003041|ref|YP_001297785.1| hypothetical protein BVU_0448 [Bacteroides vulgatus ATCC 8482]
 gi|254883679|ref|ZP_05256389.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|294775665|ref|ZP_06741173.1| putative membrane protein [Bacteroides vulgatus PC510]
 gi|149931465|gb|ABR38163.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
 gi|254836472|gb|EET16781.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|294450509|gb|EFG19001.1| putative membrane protein [Bacteroides vulgatus PC510]
          Length = 255

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 115/234 (49%), Gaps = 20/234 (8%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G   A   +   F    + +M  +GV+ + +V+LISF  GAVI  Q    +       F 
Sbjct: 24  GRTFARPERMHMFFKQYLNEMVQLGVNSIGIVLLISFFIGAVITIQIKLNIESPWMPRFV 83

Query: 200 IDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
           +   +    REI +L     +  ++++G+ GS I +EIG+M++ ++IDA+  MG++    
Sbjct: 84  VGYTT----REIMLLEFSSSIMCLILSGKVGSNIASEIGTMRVTQQIDALEIMGVNSAGY 139

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAVFFSRFHSTATLAN 309
           LI P+I AL+  +P L I +  S IIGA    W        D+ + + +S F        
Sbjct: 140 LILPKIIALMTMIPFLVIFSISSGIIGAFCTCWFGGVMNAEDLAYGLQYS-FQEWF---- 194

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
           ++   IK+ F A  I  V+   G+ V   S ++GK  T  VV S S++I+   L
Sbjct: 195 VWCSFIKSIFFAFIISSVSAYFGYTVEGGSIAVGKASTDSVVMS-SVLILFSDL 247


>gi|237757027|ref|ZP_04585479.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237690807|gb|EEP59963.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 137

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 73/128 (57%), Gaps = 6/128 (4%)

Query: 135 VISNTGE----FCASSYKFKGF--LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
           +I +TG     F  +   FK F  +  +++ M  +GV+  P+++L  F TG V+  +   
Sbjct: 7   LIEHTGNITIFFLRTLLSFKKFPKIKHILKYMEDIGVNAAPLIVLTGFFTGGVLVVETYP 66

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
              +F AE     L+S+   RE+  +L A+++  RSGSAI A IG+M+I E+IDA+  M 
Sbjct: 67  TFHKFNAEFLMGALVSLSLARELSPVLVALLVTARSGSAIAANIGTMRITEQIDALEVMA 126

Query: 249 LDFVRILI 256
           +D +R L+
Sbjct: 127 VDPMRYLV 134


>gi|319642184|ref|ZP_07996844.1| hypothetical protein HMPREF9011_02444 [Bacteroides sp. 3_1_40A]
 gi|317386170|gb|EFV67089.1| hypothetical protein HMPREF9011_02444 [Bacteroides sp. 3_1_40A]
          Length = 251

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 115/234 (49%), Gaps = 20/234 (8%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G   A   +   F    + +M  +GV+ + +V+LISF  GAVI  Q    +       F 
Sbjct: 20  GRTFARPERMHMFFKQYLNEMVQLGVNSIGIVLLISFFIGAVITIQIKLNIESPWMPRFV 79

Query: 200 IDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
           +   +    REI +L     +  ++++G+ GS I +EIG+M++ ++IDA+  MG++    
Sbjct: 80  VGYTT----REIMLLEFSSSIMCLILSGKVGSNIASEIGTMRVTQQIDALEIMGVNSAGY 135

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAVFFSRFHSTATLAN 309
           LI P+I AL+  +P L I +  S IIGA    W        D+ + + +S F        
Sbjct: 136 LILPKIIALMTMIPFLVIFSISSGIIGAFCTCWFGGVMNAEDLAYGLQYS-FQEWF---- 190

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
           ++   IK+ F A  I  V+   G+ V   S ++GK  T  VV S S++I+   L
Sbjct: 191 VWCSFIKSIFFAFIISSVSAYFGYTVEGGSIAVGKASTDSVVMS-SVLILFSDL 243


>gi|326382581|ref|ZP_08204272.1| hypothetical protein SCNU_06565 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326198700|gb|EGD55883.1| hypothetical protein SCNU_06565 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 281

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 108/215 (50%), Gaps = 6/215 (2%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           IRQ  ++  + V   +L++   G +++ Q +    Q GA  FS     +  +R+   L+T
Sbjct: 61  IRQCAFMASTSVFPTLLVAIPIGVIVSIQVSNIAGQIGATSFSGAATGLGVIRQGAPLVT 120

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPLLTILAN 275
           ++++AG  GSAI A++GS  I EEIDA+R MG++ ++ LISPR+ A +++S  L   +  
Sbjct: 121 SLLLAGAVGSAIAADLGSRTIREEIDAMRVMGVNPIQRLISPRLLATMVVSFLLCGFVCF 180

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              I G    ++     P   +   F S A + ++   L+KA      + IVA   G + 
Sbjct: 181 VGFITGYLFNVYFQGGTP-GSYTGTFASFAGVPDLLFALVKAVIFGAIVAIVACDRGLST 239

Query: 336 GVHSNSLGKKVTTCVVQSI----SIVIIIDSLFAI 366
                 +   V   VV S+    ++ +++  +FA+
Sbjct: 240 SGGPAGVANSVNAAVVNSVILLFTVNVVLTQVFAL 274


>gi|239931478|ref|ZP_04688431.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis
           ATCC 14672]
 gi|291439854|ref|ZP_06579244.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis
           ATCC 14672]
 gi|291342749|gb|EFE69705.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis
           ATCC 14672]
          Length = 254

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 108/227 (47%), Gaps = 6/227 (2%)

Query: 146 SYKFKGFLLSLIRQMYYV-GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204
            ++F+ F    + Q ++V GV+ +P   L+S   GAVIA Q      Q GA+ F+     
Sbjct: 27  PFQFREF----VEQFWFVAGVTILPAA-LVSIPFGAVIALQVGSLTQQLGAQSFTGGASV 81

Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264
           +  +++   L+ A++IAG  GSAI A++GS KI EE+DA+  MG+  V+ L+ PR+ A +
Sbjct: 82  LAVVQQASPLIVALLIAGAGGSAICADLGSRKIREELDAMEVMGVSPVQRLVVPRVLATM 141

Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI 324
               LL  L +    +G         D     + S F + A  A+++   +KA       
Sbjct: 142 GVAVLLNGLVSVVGTLGGYFFNVVLQDGTPGAYLSSFSALAQPADLYISELKALVFGFIA 201

Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           GIVA   G         +G  V   VV +  ++  ++ +    Y  I
Sbjct: 202 GIVAAYRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMVMTALYLQI 248


>gi|153809065|ref|ZP_01961733.1| hypothetical protein BACCAC_03373 [Bacteroides caccae ATCC 43185]
 gi|149128398|gb|EDM19617.1| hypothetical protein BACCAC_03373 [Bacteroides caccae ATCC 43185]
          Length = 247

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 117/226 (51%), Gaps = 23/226 (10%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           + + F    + ++  +GV+ + +V+LISF  GAVI  Q    +       +++  ++   
Sbjct: 24  RMRMFFRQYLNELEQLGVNSIGIVLLISFFIGAVITIQIKLNIESPWMPRWTVGYVT--- 80

Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
            REI +L     +  +++AG+ GS I +E+G+M++ ++IDA+  MG++    LI P+I A
Sbjct: 81  -REIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGVNSANYLILPKIAA 139

Query: 263 LIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAV--FFSRFHSTATLANIFTGLI 315
           ++  +P+L   + F+ IIGA    W        D+ + +   F+ +        I+ G+I
Sbjct: 140 MVTVIPILVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQYMFNEWF-------IWAGII 192

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           K+ F A  I  V+   G+ V   S ++GK  T  VV S  +++  D
Sbjct: 193 KSLFFAFIIASVSAFFGYTVEGGSIAVGKASTDSVVSSSVLILFAD 238


>gi|149278644|ref|ZP_01884780.1| ABC transporter, permease [Pedobacter sp. BAL39]
 gi|149230639|gb|EDM36022.1| ABC transporter, permease [Pedobacter sp. BAL39]
          Length = 244

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 88/136 (64%), Gaps = 5/136 (3%)

Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAE--IFSIDLMSILQL 208
           ++ ++ +QM ++GV  + ++ +IS   GAV+  Q AFQL S F  +  I S++  S   +
Sbjct: 26  YMKAIFKQMDFIGVGSLGLIAIISTFIGAVMTLQIAFQLVSDFIPKTIIGSVNRDS--SI 83

Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268
            E+   ++A+++AG+ GSAI +EIG+M+++E+IDA+  MG++    LI P+I A I  +P
Sbjct: 84  LELSPTISAIVLAGKIGSAISSEIGTMRVSEQIDALEIMGINSPGYLILPKIIAGITMVP 143

Query: 269 LLTILANFSAIIGASI 284
           LL I++ F +I G  I
Sbjct: 144 LLVIMSMFLSITGGYI 159


>gi|282895910|ref|ZP_06303950.1| Putative uncharacterized protein [Raphidiopsis brookii D9]
 gi|281199155|gb|EFA74024.1| Putative uncharacterized protein [Raphidiopsis brookii D9]
          Length = 238

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 1/208 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + Q+  VG   + + +L +   GAV   Q A +   FGA      ++++   RE+  +LT
Sbjct: 16  VEQLAVVGPDSLFIALLTAIFVGAVFTIQVAREFINFGAGNLVGGVLAVALTRELSPVLT 75

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV++AGR GSA  AEIG+M++ E+IDA+  +  D +        + L I+     +    
Sbjct: 76  AVILAGRVGSAFAAEIGTMRVTEQIDALLMLKTDPIDFFSHTSSFGLFINATNFDLAIPG 135

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
              +G  I+    Y++   VF     +   L +I + +IKA      I I+    G    
Sbjct: 136 YWNVGRLIIATNLYNLSDTVFLDSARNFLDLRDIISAMIKAACFGILIAIIGCSWGLTTT 195

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             +  +G+  TT VV ++ +VI I + F
Sbjct: 196 GGAKGVGQSTTTAVVTAL-LVIFISNFF 222


>gi|256380617|ref|YP_003104277.1| hypothetical protein Amir_6634 [Actinosynnema mirum DSM 43827]
 gi|255924920|gb|ACU40431.1| protein of unknown function DUF140 [Actinosynnema mirum DSM 43827]
          Length = 260

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 112/222 (50%), Gaps = 6/222 (2%)

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYY-VGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           G + +  G+  A+S++    +   ++Q ++ V V+ +P   L+S   GAVIA Q      
Sbjct: 16  GRLFALAGQVVAASFRRPFQVREFVQQCWFLVSVTVLPTA-LVSIPFGAVIALQLGSLTR 74

Query: 192 QFGAEIFS--IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           Q GA+ F+    +++I+Q  +   ++TA++IAG  GSAI A++GS  I EEIDA+  +G+
Sbjct: 75  QIGAQSFTGAASVLAIIQ--QASPIVTALLIAGAGGSAICADLGSRTIREEIDAMEVLGV 132

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
             V  L+ PR+ A ++   LL  + +   ++G         D     + + F + A L++
Sbjct: 133 SPVHRLVVPRVLAAMVVAVLLNGMVSVVGVMGGYFFNVVLQDGTPGAYLASFSALAQLSD 192

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
           ++ G +KA       GIVA   G         +G  V   VV
Sbjct: 193 LWIGELKALVFGFIAGIVAAYRGLNPAGGPKGVGDAVNQAVV 234


>gi|229496605|ref|ZP_04390319.1| conserved hypothetical protein [Porphyromonas endodontalis ATCC
           35406]
 gi|229316502|gb|EEN82421.1| conserved hypothetical protein [Porphyromonas endodontalis ATCC
           35406]
          Length = 256

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 120/232 (51%), Gaps = 27/232 (11%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           ++  F   L+R++  +G+  + +V++ISF  G VI  Q A  +S      F+I   +   
Sbjct: 33  RWSMFFKQLVREIAKIGLDSILIVMIISFFIGTVITIQLAINISSPMIPRFTIGYST--- 89

Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
            REI +L     +  +++AG+ GS+I +E+G+M++ E+IDA+  MG++    LI P+I  
Sbjct: 90  -REIVLLEFSSSIMCLILAGKIGSSIASELGTMRVTEQIDALEVMGINSANFLILPKIIG 148

Query: 263 LIISLPLLTILANFSAIIGASIVIW-------KYYDIPFAVFFSRFHSTATLANIFTGLI 315
           L++ +P+L+I++  +AI G  +  W       + ++    ++F+ +       N+   +I
Sbjct: 149 LLLFIPVLSIISMATAIGGGFLATWLTPSLTAEDFEYGMQLYFNPY-------NVLYSVI 201

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKV--TTCVVQSISIVIIIDSLFA 365
           K+  +  A  I +    F   V   +LG  V  T  VV S  ++++ D L  
Sbjct: 202 KS--LVYAFIITSGSSYFGYNVKGGALGVGVASTNAVVTSSVLILLADVLLT 251


>gi|91070487|gb|ABE11396.1| putative transporter, membrane component [uncultured
           Prochlorococcus marinus clone HOT0M-1A11]
          Length = 251

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 7/220 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L  Q+   G   + +V++     G V   Q A QL+  G       L+++   RE+  LL
Sbjct: 34  LFDQLMESGPGSLLIVLITGIAAGTVFNIQVASQLTSMGVSSEIGGLLAVGMAREMAPLL 93

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA ++ G+  +A  A++G+MK+ E+I+AI  +  + V+ L+ PR+ +++I  P+  +L  
Sbjct: 94  TATLMTGKVATAYAAQLGTMKVTEQIEAITMLRTEPVQYLVVPRLLSMVIMSPIQCLL-- 151

Query: 276 FSAIIGASIVIWK--YYDIPFAVFFSRFHS---TATLANIFTGLIKAPFMACAIGIVAMK 330
           F ++   S  IW   +Y +P  VF++   S   + T  ++ + LIK+      I I+A  
Sbjct: 152 FLSVALWSGQIWSTIFYKVPPIVFWTSVRSGNVSLTSTDLTSMLIKSVVFGLIISIIACG 211

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            G         +G   T  VV ++  V ++D L     F 
Sbjct: 212 YGLTTKGGPKEVGTSTTGAVVMTLVTVSLMDVLLTQILFG 251


>gi|302560790|ref|ZP_07313132.1| YrbE family protein [Streptomyces griseoflavus Tu4000]
 gi|302478408|gb|EFL41501.1| YrbE family protein [Streptomyces griseoflavus Tu4000]
          Length = 254

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 109/227 (48%), Gaps = 6/227 (2%)

Query: 146 SYKFKGFLLSLIRQMYYV-GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204
            ++F+ F    I Q +++ GV+ +P   L+S   GAVIA Q      Q GA+ F+     
Sbjct: 27  PFQFREF----IEQFWFIAGVTILPAA-LVSIPFGAVIALQVGSLTQQLGAQSFTGGASV 81

Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264
           +  +++   L+ A++IAG  GSAI A++GS KI EE+DA+  MG+  V+ L+ PR+ A +
Sbjct: 82  LAVVQQASPLIVALLIAGAGGSAICADLGSRKIREELDAMEVMGVSPVQRLVVPRVLATM 141

Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI 324
               LL  L +    +G         D     + S F + A L++++   +KA       
Sbjct: 142 GVAVLLNGLVSVVGTLGGYFFNVVMQDGTPGAYLSSFSALAQLSDLYISELKALVFGFIA 201

Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           GIVA   G         +G  V   VV +  ++  ++ +    Y  I
Sbjct: 202 GIVAAYRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMVMTGIYLQI 248


>gi|281421763|ref|ZP_06252762.1| ABC transporter, permease [Prevotella copri DSM 18205]
 gi|281404258|gb|EFB34938.1| ABC transporter, permease [Prevotella copri DSM 18205]
          Length = 248

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 110/218 (50%), Gaps = 2/218 (0%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSIL 206
           + + FL   I++M  +G+  + +V+LISF  GAVI  Q    + S +     S      +
Sbjct: 26  RMRMFLKQYIKEMSQLGIDSIGIVLLISFFIGAVICIQMKLNIQSPWMPRWVSGYTTREI 85

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            L E    +  +++AG+ GS I +E+G+M++ ++IDA+  MG++    LI P+I  L+  
Sbjct: 86  MLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALDIMGVNSACYLILPKILGLVTI 145

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326
           +P L I ++   IIGA    +  + +P          +     ++  +IK+ F A  I  
Sbjct: 146 MPFLVIFSSGMGIIGAYGTAYIGHILPPDDLTLGLQHSFNQWFVWMSIIKSLFFAFIISS 205

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           V+   G+ V   S  +GK  T  VV S S++I+   +F
Sbjct: 206 VSSYFGYTVEGGSVEVGKSSTDAVVCS-SVLILFSDVF 242


>gi|198276177|ref|ZP_03208708.1| hypothetical protein BACPLE_02366 [Bacteroides plebeius DSM 17135]
 gi|198270989|gb|EDY95259.1| hypothetical protein BACPLE_02366 [Bacteroides plebeius DSM 17135]
          Length = 247

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 109/226 (48%), Gaps = 19/226 (8%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  +   G   +   +F+ +    + +M  +G++ + +V+LISF  GAVI  Q    + 
Sbjct: 8   LGKYLMLMGRVFSRPERFRMYFKQYLNEMVQLGINSIGIVLLISFFIGAVICIQIKLNIE 67

Query: 192 QFGAEIFSIDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
                 F +   +    REI +L     +  +++AG+ GS I +EIG+M++ ++IDA+  
Sbjct: 68  SPWMPRFVVGYTT----REILLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALEI 123

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAVFFSRF 301
           MG++    LI P+I  L+  +P L I + F+ +IGA    W        D+ + + +   
Sbjct: 124 MGVNSASYLILPKILGLMTMIPFLVIFSIFAGVIGAFCTAWFAGIMNATDLEYGLQYCFV 183

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
                   I+   IK+ F A  I  V+   G+ V   S ++GK  T
Sbjct: 184 E-----WYIWCSFIKSLFFAFIIASVSAYFGYTVEGGSIAVGKAST 224


>gi|88658302|ref|YP_506914.1| hypothetical protein ECH_0084 [Ehrlichia chaffeensis str. Arkansas]
 gi|88599759|gb|ABD45228.1| conserved hypothetical protein [Ehrlichia chaffeensis str.
           Arkansas]
          Length = 275

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 105/206 (50%), Gaps = 10/206 (4%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P+V + +  TGAV+  Q +  +    +  F   ++ +  +RE+G +L  ++IAGR G+A
Sbjct: 74  LPIVGITAIFTGAVLILQNSLIIHNNVSGDFVSGVVVVAIVRELGPVLIGLIIAGRVGAA 133

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I AEIG+M+I E+IDA+ T+  +  + L+ PRI + ++++P+L + A+     G  IV  
Sbjct: 134 IAAEIGTMRITEQIDALFTLDTNPFKYLVVPRIISAMVAMPILILCADLIGAYGGYIV-- 191

Query: 288 KYYDIPFAVFFSRFHSTATL-----ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
             Y + +    S  +    +      ++  GL+KA      I  +    G+     +  +
Sbjct: 192 GSYQLGYT---SEMYIKGVIKFLHAKDVALGLVKATVFGFIISFMGCYSGYYCSGGARGV 248

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFY 368
           G   T  VV S   +I+ + +  +FY
Sbjct: 249 GLATTYVVVVSSMFIILFNYIITVFY 274


>gi|118469389|ref|YP_885535.1| ABC transporter transmembrane protein [Mycobacterium smegmatis str.
           MC2 155]
 gi|118170676|gb|ABK71572.1| ABC-transporter integral membrane protein [Mycobacterium smegmatis
           str. MC2 155]
          Length = 289

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 102/212 (48%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           IRQ  ++  + V   +L++   G  ++ Q A    Q GA   +     +  +R+   L  
Sbjct: 69  IRQGAFMASTAVVPTVLVALPIGVTLSIQFALLAGQVGATSLAGAASGLAVIRQAASLTA 128

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV++A   GSAI A++GS K+ EE DA+  MG+  ++ L+ PR  A I+    LT +  F
Sbjct: 129 AVLMAAAVGSAITADLGSRKMREETDAMEVMGVSVIKRLVVPRFAAAIMIGVALTGVVCF 188

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
              I + +    + D     F + F S AT  ++   LIKA      + +V+ ++G +  
Sbjct: 189 VGFIASFLFNVYFQDGAPGSFVATFASFATTGDMIVALIKAVIFGAIVAVVSCQKGLSTV 248

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
                +   V   VV+SI ++++++   +  Y
Sbjct: 249 GGPTGVANSVNAAVVESILLLMVVNVAISQLY 280


>gi|288801493|ref|ZP_06406945.1| ABC transporter, permease [Prevotella sp. oral taxon 299 str.
           F0039]
 gi|288331574|gb|EFC70060.1| ABC transporter, permease [Prevotella sp. oral taxon 299 str.
           F0039]
          Length = 248

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 119/239 (49%), Gaps = 12/239 (5%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  I   G   +   + + F    I++M  +GV  + +V+LISF  GAVI  Q    + 
Sbjct: 10  LGEYIMLMGRSFSRPERMRMFFKRYIKEMSSLGVDSIGIVLLISFFIGAVICIQMKLNIQ 69

Query: 192 QFGAEIFSIDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
                 +    +S    REI +L     +  ++++G+ GS I +E+G+M++ ++IDA+  
Sbjct: 70  ----SPWMPRWVSGYTTREILILEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALDI 125

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI-PFAVFFSRFHSTA 305
           MG++    LI P+I  L+  +P L I ++ + I+GA    +  + + P  +     HS  
Sbjct: 126 MGINSASYLIMPKILGLVTIMPFLVIFSSVTGILGAYATAYIGHILSPEDLTLGLQHSFN 185

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               ++  +IK+ F A  I  V+   G+ V   S  +GK  T  VV S SI+I+   +F
Sbjct: 186 PWF-VWMSIIKSLFFAFIIASVSSYYGYTVQGGSVEVGKSSTDAVVSS-SILILFSDVF 242


>gi|152990804|ref|YP_001356526.1| ABC transporter, permease [Nitratiruptor sp. SB155-2]
 gi|151422665|dbj|BAF70169.1| ABC transporter, permease [Nitratiruptor sp. SB155-2]
          Length = 263

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 104/205 (50%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           ++QM  +GV  + V+ L +  TG V A Q      +FGAE F    + +   +E+G +  
Sbjct: 47  LQQMDIIGVGSLFVISLTAIFTGLVEAIQLYHGFHKFGAEEFMGYTIFVSISKELGPVFG 106

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A+M+  R+ SA+ AE+G+M++ E+IDAI T+ +D  + LI PR+ A  +S P+L I+  F
Sbjct: 107 ALMLVSRAVSAMTAELGTMRVTEQIDAIDTLAVDSKKYLIVPRVIAATLSTPILVIVFVF 166

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
              I A ++      +    + +   +    ++I TG+IKA      I I+    G+   
Sbjct: 167 LGNIAAYLISVYALGVNPNSYKNTITTYLEFSDIGTGIIKAFVFGYLISIIGTYIGYFTR 226

Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361
             +  +G   T  VV +   V + +
Sbjct: 227 GGARGVGLSTTKSVVYAAMTVFVAN 251


>gi|33861880|ref|NP_893441.1| putative transporter, membrane component [Prochlorococcus marinus
           subsp. pastoris str. CCMP1986]
 gi|33640248|emb|CAE19783.1| possible transporter, membrane component [Prochlorococcus marinus
           subsp. pastoris str. CCMP1986]
          Length = 251

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 116/234 (49%), Gaps = 9/234 (3%)

Query: 144 ASSYKFKGFLL--SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSID 201
           A +Y F+G +    L  Q+   G   + +V++     G V   Q A QL+  G       
Sbjct: 20  AINYIFRGKISKNDLFEQLMESGPGSLVIVLITGIAAGTVFNIQVASQLTSMGVSSEIGG 79

Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261
           L+++   RE+  LLTA ++ G+  +A  A++G+MK+ E+I+AI  +  + ++ L+ PR+ 
Sbjct: 80  LLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTEQIEAITMLRTEPIQYLVVPRLL 139

Query: 262 ALIISLPLLTILANFSAIIGASIVIWK--YYDIPFAVFFSRFHS---TATLANIFTGLIK 316
           ++II  P+  +L  F ++   S  IW   +Y++P  VF++   S   + T +++ + +IK
Sbjct: 140 SMIIMSPIQCLL--FLSVALWSGQIWSTIFYNVPPIVFWTSVRSGNVSLTSSDLSSMIIK 197

Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +      I I+A   G         +G   T  VV ++  V ++D +     F 
Sbjct: 198 SVVFGLLISIIACGYGLTTKGGPKEVGTSTTGAVVMTLVTVSLMDVVLTQILFG 251


>gi|294816012|ref|ZP_06774655.1| Putative YrbE family protein [Streptomyces clavuligerus ATCC 27064]
 gi|326444354|ref|ZP_08219088.1| putative YrbE family protein [Streptomyces clavuligerus ATCC 27064]
 gi|294328611|gb|EFG10254.1| Putative YrbE family protein [Streptomyces clavuligerus ATCC 27064]
          Length = 293

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 108/242 (44%)

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
           H  G   + T E   S ++    L   I Q ++V    +    L+S   GAVIA Q    
Sbjct: 46  HETGRFFALTAEIVRSVFRRPFQLREFIEQFWFVASVTILPAALVSIPFGAVIALQVGSL 105

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
             Q GA+ F+     +  +++   L+ A++IAG  GSAI A++GS KI EE+DA+  MG+
Sbjct: 106 TQQLGAQSFTGGASVLAVIQQASPLIVALLIAGAGGSAICADLGSRKIREELDAMEVMGV 165

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
             ++ L+ PR+ A ++   LL  + +    +G         D     + + F + A L +
Sbjct: 166 SPIQRLVVPRVLATMLVAFLLNGMISVVGTLGGYFFNVIMQDGTPGAYLASFSALAQLPD 225

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           ++    KA       G+VA   G         +G  V   VV +  ++  ++ +    Y 
Sbjct: 226 LYISEFKALVFGFIAGVVAAHRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMIITAIYL 285

Query: 370 AI 371
            +
Sbjct: 286 QV 287


>gi|289645181|ref|ZP_06477196.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
 gi|289505006|gb|EFD26089.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
          Length = 286

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 88/177 (49%), Gaps = 13/177 (7%)

Query: 198 FSIDLMSIL-------------QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           ++ DL+S+L              +REI    T + +AG  G+A+ A++G+ +I EE+DA+
Sbjct: 92  YAYDLLSLLGGQNRIGTYFVMASIREISPFCTGMAVAGVMGTAMAADLGARRIREELDAL 151

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           + +G+D  R+L+ PR+ A+ I     TI+     II A      +       +F+ F S+
Sbjct: 152 KVLGVDSTRMLVLPRVLAITIMTVAFTIIGGLLGIIMAMTSATVFGTTSVGGYFANFLSS 211

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            T   +   ++K+      IG+V  ++G  V   S  +G+ V   VV   + V +I+
Sbjct: 212 LTTPELVGVVVKSTLTGTFIGVVCAQKGLTVRGGSEGVGRAVNEAVVLCFAAVWVIN 268


>gi|242073950|ref|XP_002446911.1| hypothetical protein SORBIDRAFT_06g024700 [Sorghum bicolor]
 gi|241938094|gb|EES11239.1| hypothetical protein SORBIDRAFT_06g024700 [Sorghum bicolor]
          Length = 338

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 106/215 (49%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           +L+ Q+  VG     V +L +   G     Q   + ++ G       ++++   RE+  +
Sbjct: 112 NLLAQLRRVGPGSAGVALLTAAFVGMAFTIQFVREFTRLGLHRSVGGVLALALARELSPV 171

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TAV+ AGR GSA  AE+G+M+++E+ D +R +G   V  L+ PR+ A +++LP+LT+++
Sbjct: 172 VTAVVAAGRVGSAFAAELGTMQVSEQTDTLRVLGAHPVDYLVVPRVLACVLALPVLTLIS 231

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
               +  ++ +    + +  ++            ++ + L+K+      I +V+   G  
Sbjct: 232 FALGLASSAFLADSVFGVSVSIILESARRALRPWDLISSLLKSQVFGAIIAVVSCAWGVT 291

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               +  +G+  T+ VV S+  + + D   +  +F
Sbjct: 292 THGGAKGVGESTTSAVVVSLVGIFVADFALSCLFF 326


>gi|11465859|ref|NP_054003.1| hypothetical protein PopuCp208 [Porphyra purpurea]
 gi|1723414|sp|P51393|YCF63_PORPU RecName: Full=Probable ABC transporter permease protein ycf63
 gi|1276859|gb|AAC08279.1| ORF263 [Porphyra purpurea]
          Length = 263

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ------- 207
           SL  Q+Y VG    P  + I+ +T   I+     Q+++   E   +D  S L        
Sbjct: 36  SLAEQIYLVG----PGSLNITLLTACFISMVFTMQIAK---EFLHLDAASALGAVIVIAF 88

Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267
            RE+  +LTAV+IAG+ GS+  AEI +M+  E+IDA+  +  + +  L+ P++ A  I L
Sbjct: 89  TRELSPVLTAVIIAGKIGSSFTAEIATMETTEQIDALYLLNTNPIDYLVFPKVAACCIML 148

Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327
           P+L+ ++  ++I  +  V +  Y IP ++F        ++++ F+ L K+      I  +
Sbjct: 149 PILSTISLTASIAISIFVSFVMYGIPSSIFLKSAFLALSVSDFFSCLQKSLCFGTIIAFI 208

Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           + + G      +  +G   T+ VV  +  + I D + + F F
Sbjct: 209 SCQWGLTSSGGAKGVGNSTTSSVVTILLTIFITDFILSYFMF 250


>gi|254476887|ref|ZP_05090273.1| membrane protein [Ruegeria sp. R11]
 gi|214031130|gb|EEB71965.1| membrane protein [Ruegeria sp. R11]
          Length = 266

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 108/217 (49%), Gaps = 17/217 (7%)

Query: 156 LIRQMYY----------VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
           ++R  YY          VG   +PVV L +  TG  +A Q     ++F AE     +++I
Sbjct: 41  MVRPPYYPREVLNALLQVGWLSLPVVGLTAIFTGGALALQIYAGGARFNAEAVVPQIVAI 100

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
             +RE+G +L  +MIA R  S+I AEI +MK+ E+IDA+ T+    ++ L++PR+ A ++
Sbjct: 101 GMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQIDALVTLSTHPMKYLVAPRVLAALL 160

Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325
           ++P+L  + +   I+G  +V  +      A +           +I + L+K      A G
Sbjct: 161 TVPVLVGVGDIIGIMGGYVVATQNLGFNPAAYLKNTVDFLEARDIISSLVK----GAAFG 216

Query: 326 IVAMKEGFAVGVHSNSLGKKV---TTCVVQSISIVII 359
            +A   G   G+ S    + V   T   V++ +++I+
Sbjct: 217 TIAATMGCYYGMQSGRGAQGVGRATKGSVEAAAVLIL 253


>gi|226532225|ref|NP_001143055.1| hypothetical protein LOC100275524 [Zea mays]
 gi|194697070|gb|ACF82619.1| unknown [Zea mays]
 gi|195613586|gb|ACG28623.1| hypothetical protein [Zea mays]
          Length = 335

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 106/215 (49%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           +L+ Q+  VG     V +L +   G     Q   + ++ G       ++++   RE+  +
Sbjct: 109 NLLAQLRRVGPGSAGVALLTAAFVGMAFTIQFVREFTRLGLHRSVGGVLALALARELSPV 168

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TAV+ AGR GSA  AE+G+M+++E+ D +R +G   V  L+ PR+ A +++LP+LT+++
Sbjct: 169 VTAVVAAGRVGSAFAAELGTMQVSEQTDTLRVLGAHPVDYLVVPRVLACVLALPVLTLIS 228

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
               +  ++ +    + +  ++            ++ + L+K+      I +V+   G  
Sbjct: 229 FALGLASSAFLADSVFGVSVSIILESARRALRPWDLISSLLKSQVFGAIIAVVSCAWGVT 288

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               +  +G+  T+ VV S+  + I D   +  +F
Sbjct: 289 THGGAKGVGESTTSAVVVSLVGIFIADFALSCLFF 323


>gi|228471177|ref|ZP_04055990.1| conserved hypothetical protein [Porphyromonas uenonis 60-3]
 gi|228306992|gb|EEK16074.1| conserved hypothetical protein [Porphyromonas uenonis 60-3]
          Length = 251

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 113/219 (51%), Gaps = 9/219 (4%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           K+  F   LIR++   G+  + +V++ISF  G VI  Q +  ++      F+I   S   
Sbjct: 28  KWGIFFKQLIREIAKYGLDSIWIVVIISFFIGTVITIQLSINMNSPLIPHFTIGYAS--- 84

Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
            REI  L     +  +++AG+ GS+I +E+ +M++ E+IDA+  MG++    LI P+I  
Sbjct: 85  -REIMFLEFSSSIMCLILAGKVGSSIASELATMRVTEQIDAMEIMGVNSANFLILPKILG 143

Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322
           L++ +P+L++++  + ++G  +  +    I  + F     +     NIF  +IK+   A 
Sbjct: 144 LMLFIPVLSVISMSTGLVGGYLATYFIPTITPSDFEMGLQTFFVTRNIFYSIIKSLVYAF 203

Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            I   A   G+ V   +  +G+  T  VV S  ++++ D
Sbjct: 204 IISSGASYFGYTVKGGALGVGRASTNAVVSSCVLILLAD 242


>gi|325300148|ref|YP_004260065.1| hypothetical protein Bacsa_3064 [Bacteroides salanitronis DSM
           18170]
 gi|324319701|gb|ADY37592.1| protein of unknown function DUF140 [Bacteroides salanitronis DSM
           18170]
          Length = 246

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 117/242 (48%), Gaps = 20/242 (8%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  I   G   +   + + +    + +M  +G++ + +V+LISF  GAVI  Q    + 
Sbjct: 8   LGKYIMLMGRVFSRPERVRMYFKQYVNEMAQLGINSIGIVLLISFFIGAVICIQIKLNIE 67

Query: 192 QFGAEIFSIDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
                 F +   +    REI +L     +  +++AG+ GS I +E+G+M++ ++IDA+  
Sbjct: 68  SPWMPRFVVGYTT----REILLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEI 123

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAVFFSRF 301
           MG++    LI P+I  LI  +P+L   + F+ +IGA    W        D+ + + +   
Sbjct: 124 MGVNSASYLILPKILGLITMIPVLVTFSIFAGVIGAFCTAWFAGIMNATDLEYGIQYCFV 183

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                   ++   IK+ F A  I  V+   G+ V   S ++GK  T  VV S S++I+  
Sbjct: 184 E-----WYVWCSFIKSFFFAFIISSVSAFFGYTVEGGSIAVGKASTDAVVSS-SVLILFS 237

Query: 362 SL 363
            L
Sbjct: 238 DL 239


>gi|300728342|ref|ZP_07061707.1| conserved hypothetical protein [Prevotella bryantii B14]
 gi|299774407|gb|EFI71034.1| conserved hypothetical protein [Prevotella bryantii B14]
          Length = 252

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 121/245 (49%), Gaps = 22/245 (8%)

Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ- 189
           +LG  I   G+  +   + + +    I++M  +GV  + +V+LISF  GAVI  Q     
Sbjct: 13  VLGTYIQLMGKVFSRPERLRMYSKQYIKEMTQLGVDSIGIVLLISFFIGAVICIQMKLNI 72

Query: 190 ----LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
               + ++ A   + ++M    L E    +  ++++G+ GS I +E+G+M++ ++IDA+ 
Sbjct: 73  QSPWMPRWVAGYTTREIM----LLEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALD 128

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MG++    LI P+I AL+  +P L I ++   I+GA      Y         S    T 
Sbjct: 129 IMGVNSASYLILPKIAALVTIMPFLVIFSSAMGIVGA------YGTAYIGQILSPEDLTL 182

Query: 306 TLAN------IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
            + +      I+  +IK+ F A  I  V+   G+ V   S  +GK  TT VV S S++I+
Sbjct: 183 GIQHSFNQWFIWMSIIKSLFFAFIISSVSSYFGYTVEGGSVEVGKASTTAVVNS-SVLIL 241

Query: 360 IDSLF 364
              +F
Sbjct: 242 FSDVF 246


>gi|320007322|gb|ADW02172.1| protein of unknown function DUF140 [Streptomyces flavogriseus ATCC
           33331]
          Length = 282

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 105/217 (48%), Gaps = 4/217 (1%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I Q ++V    +    L+S   GAVIA Q      Q GA+ F+     +  +++   L+ 
Sbjct: 62  IEQFWFVASVTILPAALVSIPFGAVIALQVGSLTEQLGAQSFTGGASVLAVIQQASPLIV 121

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++IAG +GSAI A++GS KI EE+DA+  MG+  V+ L+ PR+ A +    LL  L + 
Sbjct: 122 ALLIAGAAGSAICADLGSRKIREELDAMEVMGVSPVQRLVVPRVLATMFVAVLLNGLVSV 181

Query: 277 SAIIGASI--VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
              +G     VI +    P A + + F + A L +++ G +KA       GIVA   G  
Sbjct: 182 VGTLGGYFFNVIMQ-GGTPGA-YLASFSALAQLPDLYVGELKALIFGFIAGIVAAYRGLN 239

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
                  +G  V   VV +  ++  ++ +    Y  I
Sbjct: 240 PRGGPKGVGDAVNQSVVITFMLLFAVNMVLTAIYLQI 276


>gi|284043083|ref|YP_003393423.1| hypothetical protein Cwoe_1620 [Conexibacter woesei DSM 14684]
 gi|283947304|gb|ADB50048.1| protein of unknown function DUF140 [Conexibacter woesei DSM 14684]
          Length = 246

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 1/145 (0%)

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            +RE    +TA+++AG +G+AI A++G+ KI EE+DA++ +G+D V+ L+ PR  AL++ 
Sbjct: 75  SIREFAPFVTAIVLAGVAGTAITADLGARKIREELDALQVLGVDPVKNLVVPRFLALMLV 134

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326
             L  + A    + G  I        P   FF+ F + A+  +++  L+K       I I
Sbjct: 135 TGLFDVYALLFGVFGGVIATL-VNGAPLGPFFATFLTNASTTDLWGSLLKTTLFGAIIAI 193

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVV 351
           V   +G      +  +G+ V   VV
Sbjct: 194 VCCYKGMTASGGAEGVGRAVNQAVV 218


>gi|282878075|ref|ZP_06286880.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310]
 gi|281299815|gb|EFA92179.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310]
          Length = 250

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 112/225 (49%), Gaps = 22/225 (9%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           + + F    +++M  +GV  +P+V+LISF  GAVI  Q    +       ++   ++   
Sbjct: 29  RMRMFFKRYVKEMCQLGVDSIPLVLLISFFIGAVICIQMKVNVQSPWMPRWTTGYVT--- 85

Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
            REI +L        +++AG+ GS I +E+G+M++ ++IDA+  MG++    LI P+I  
Sbjct: 86  -REIFLLEFASAFMCLILAGKVGSNIASELGTMRVTQQIDALDIMGVNPASYLILPKIAG 144

Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR------FHSTATLANIFTGLIK 316
           LI  +P L I ++ + IIGA       Y   ++   S       F  +  +  ++  +IK
Sbjct: 145 LITIMPFLVIFSSVAGIIGA-------YGTAYSGVLSPDDLTAGFQYSFNVWFVWMSIIK 197

Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           +   A  I  V+   G++V   S  +G+  T  VV S  +V+  D
Sbjct: 198 SIVFAFIIASVSSFYGYSVRGGSVEVGEASTNAVVSSSVLVLFAD 242


>gi|269124784|ref|YP_003298154.1| hypothetical protein Tcur_0519 [Thermomonospora curvata DSM 43183]
 gi|268309742|gb|ACY96116.1| protein of unknown function DUF140 [Thermomonospora curvata DSM
           43183]
          Length = 288

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 100/203 (49%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V+  +SF  G  I  QG   L   GAE F   + S   +REI  ++ AV +A + GSA  
Sbjct: 79  VIFTMSFFVGTEIGLQGYTGLRSIGAESFMGLVGSFANVREITPVIAAVALAAQCGSAFT 138

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AE+G+M+I+EEIDA+  MG+     L+  R+ A +I+L  L ++A F++     ++  ++
Sbjct: 139 AELGAMRISEEIDALEVMGISSFTYLVCTRVLAALIALVPLYLIALFASFFSTRLITTQF 198

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
           + +   V+   F     + ++    IK    A A+  +    G+        +G+     
Sbjct: 199 FGLAPGVYDYYFQLYLPMIDLVYSSIKVAVFAFAVIAIHCYYGYYATGGPAGVGRATGRA 258

Query: 350 VVQSISIVIIIDSLFAIFYFAIG 372
           +  SI +++ ++ L +  ++  G
Sbjct: 259 IRLSIIVIVTLNLLLSYLFWGNG 281


>gi|124005927|ref|ZP_01690765.1| domain of unknown function superfamily [Microscilla marina ATCC
           23134]
 gi|123988610|gb|EAY28251.1| domain of unknown function superfamily [Microscilla marina ATCC
           23134]
          Length = 248

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 81/138 (58%), Gaps = 1/138 (0%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSI-DLMSIL 206
           +FK ++   I +   +G+  V +V++ S   GAV A Q A+ L      ++ I  ++  +
Sbjct: 20  RFKVYVRLTIDECMRIGIDSVFIVVITSTFIGAVAAVQTAYNLVSPAIPLYVIGTIVRDM 79

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            + E    +T +++AG+ GS I   +G+M+I E++DAI  MG++    L+ P+I A +I+
Sbjct: 80  AILEFAPTITCIVLAGKVGSNIAGGLGTMRITEQVDAIEVMGINAASYLVLPKITAALIT 139

Query: 267 LPLLTILANFSAIIGASI 284
           +P+L ++A F +I+G  I
Sbjct: 140 IPMLCVIAGFLSIMGGFI 157


>gi|145220618|ref|YP_001131296.1| hypothetical protein Mflv_0012 [Mycobacterium gilvum PYR-GCK]
 gi|145213104|gb|ABP42508.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
          Length = 312

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 107/222 (48%), Gaps = 4/222 (1%)

Query: 147 YKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206
           ++F+ F    +RQ  ++  + V   +L++   G  ++ Q A    Q GA   +     + 
Sbjct: 86  FQFQEF----VRQGAFMAGTAVLPTVLVALPIGVTLSIQFALLAGQVGATSLAGAASGLA 141

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            +R+   L  A+++A   GSAI A++GS K+ EE DA+  MG+  +R L+ PR  A I+ 
Sbjct: 142 VIRQAASLTAAILMAAAVGSAITADLGSRKMREETDAMEVMGVSVIRRLVVPRFAAAIMI 201

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326
              LT +  F   + + +    + +     F + F S AT  ++   L+KA      + I
Sbjct: 202 GVALTGVVCFVGFLASYLFNVYFQNGAPGSFVATFASFATTGDMIVALVKAVIFGAIVAI 261

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           V+ ++G +       +   V   VV+SI ++++++   +  Y
Sbjct: 262 VSCQKGLSTQGGPTGVANSVNAAVVESILVLMVVNVAISQLY 303


>gi|126728696|ref|ZP_01744511.1| membrane protein [Sagittula stellata E-37]
 gi|126710626|gb|EBA09677.1| membrane protein [Sagittula stellata E-37]
          Length = 260

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 74/122 (60%)

Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219
           M  VG   +PVV L +F TGA +A Q     ++F AE     +++I  +RE+G +L  +M
Sbjct: 49  MMNVGWLSLPVVGLTAFFTGAALALQIYSGGARFNAEAVVPQIVAIGMVRELGPVLVGLM 108

Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279
           IA R  S+I AEI +MK+ E+IDA+ T+  + ++ L++PR+ A ++ +P L  + +   +
Sbjct: 109 IAARVTSSIAAEIATMKVTEQIDALTTLSTNPMKYLVAPRLLAALLVVPALVGIGDVIGV 168

Query: 280 IG 281
            G
Sbjct: 169 FG 170


>gi|126696848|ref|YP_001091734.1| putative transporter, membrane component [Prochlorococcus marinus
           str. MIT 9301]
 gi|126543891|gb|ABO18133.1| possible transporter, membrane component [Prochlorococcus marinus
           str. MIT 9301]
          Length = 251

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 105/211 (49%), Gaps = 7/211 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L  Q+   G   + +V++     G V   Q A QL+  G       L+++   RE+  LL
Sbjct: 34  LFDQLMESGPGSLLIVLITGIAAGTVFNIQVASQLTSMGVSSEIGGLLAVGMAREMAPLL 93

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA ++ G+  +A  A++G+MK+ E+I+AI  +  + V+ L+ PR+ +++I  P+  +L  
Sbjct: 94  TATLMTGKVATAYAAQLGTMKVTEQIEAITMLRTEPVQYLVVPRLLSMVIMSPIQCLL-- 151

Query: 276 FSAIIGASIVIWK--YYDIPFAVFFSRFHS---TATLANIFTGLIKAPFMACAIGIVAMK 330
           F ++   S  IW   +Y +P  VF++   S   + T  ++ + LIK+      I I+A  
Sbjct: 152 FLSVALWSGQIWSTIFYKVPPIVFWTSVRSGNVSLTSTDLTSMLIKSVVFGLLIAIIACG 211

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            G         +G   T  VV ++  V ++D
Sbjct: 212 YGLTTKGGPKEVGTSTTGAVVMTLVTVSLMD 242


>gi|326527561|dbj|BAK08055.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 341

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/218 (23%), Positives = 107/218 (49%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           +L+ Q+  VG     V +L +   G     Q   + ++ G       ++++   RE+  +
Sbjct: 114 NLLAQLRRVGPGSAGVSLLTAAFVGMAFTIQFVREFTRLGLHRSVGGVLALALARELTPV 173

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TAV+ AGR GSA  AE+G+M+++E+ D +R +G   +  L+ PR+ A +++LP+LT+++
Sbjct: 174 VTAVVAAGRVGSAFAAELGTMQVSEQTDTLRVLGSQPIDYLVVPRVLACVLALPVLTLIS 233

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
               +  ++ +    + +  ++            ++ + LIK+      I +V+   G  
Sbjct: 234 FALGLASSAFLADAVFGVSTSIILESARKALRPWDLISALIKSQVFGAIIAVVSCAWGVT 293

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
               +  +G+  T+ VV S+  + I D   +  +F  G
Sbjct: 294 THGGAKGVGESTTSAVVISLVGIFIADFALSCLFFQAG 331


>gi|325268715|ref|ZP_08135344.1| ABC superfamily ATP binding cassette transporter permease protein
           [Prevotella multiformis DSM 16608]
 gi|324988959|gb|EGC20913.1| ABC superfamily ATP binding cassette transporter permease protein
           [Prevotella multiformis DSM 16608]
          Length = 248

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 110/224 (49%), Gaps = 14/224 (6%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSIL 206
           + + FL   +++M  +GV  + +V+LISF  GAVI  Q    + S +     S  +   +
Sbjct: 26  RMRMFLKRYVKEMSQLGVDSIGIVLLISFFIGAVICIQIKLNVQSPWMPHWVSGYVTREI 85

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            L E    +  ++++G+ GS I +E+G+M++ ++IDA+  MG++    LI P++  LI  
Sbjct: 86  MLLEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALEIMGINSASYLILPKMLGLITI 145

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG------LIKAPFM 320
           +P L I +  + IIGA      Y         +    TA L + F        +IK  F 
Sbjct: 146 MPFLVIFSAATGIIGA------YATAYIGHIITPIDLTAGLQHDFNAWFMWMSIIKGFFF 199

Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A  I  V+   G+ V   S  +GK  T  VV S S++I+   +F
Sbjct: 200 AFIISSVSSYMGYTVKGGSVEVGKASTDAVVCS-SVLILFSDVF 242


>gi|60683336|ref|YP_213480.1| hypothetical protein BF3899 [Bacteroides fragilis NCTC 9343]
 gi|60494770|emb|CAH09576.1| putative membrane protein [Bacteroides fragilis NCTC 9343]
 gi|301164825|emb|CBW24385.1| putative membrane protein [Bacteroides fragilis 638R]
          Length = 254

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 116/227 (51%), Gaps = 25/227 (11%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           + + F    I+++  +GV+ + +V+LISF  GAVI  Q    +       +++  ++   
Sbjct: 31  RMRMFFRQYIKEIEQLGVNSIGIVLLISFFIGAVITIQIKLNIESPWMPRWTVGYVT--- 87

Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
            REI +L     +  +++AG+ GS I +E+G+M++ ++IDA+  MG++    LI P+I A
Sbjct: 88  -REILLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGVNSANYLILPKITA 146

Query: 263 LIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAV---FFSRFHSTATLANIFTGL 314
           ++  +P+L   + F+ IIGA    W        D+ + +   F   F        ++ G+
Sbjct: 147 MVTMIPILVTFSIFAGIIGAFATCWFGGIMTATDLEYGLQYMFVEWF--------VWCGI 198

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D
Sbjct: 199 IKSLFFAFIIASVSSFFGYTVEGGSIEVGKASTDSVVSSSVLILFAD 245


>gi|169631592|ref|YP_001705241.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169243559|emb|CAM64587.1| Putative YrbE family protein [Mycobacterium abscessus]
          Length = 285

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 4/214 (1%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +RQ  +   + V  VIL++   G  ++ Q A    Q GA   +     I  +R+   L+ 
Sbjct: 65  VRQGAFQAATAVMPVILVTLPIGVTLSIQFALLAGQVGATSLAGAASGIAIIRQAASLVA 124

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV++A   GSAI A++GS  + EE DA+  MG+  +R L+ PR  A I+    LT +  F
Sbjct: 125 AVLMASAVGSAITADLGSRTMREETDAMEVMGVSVIRRLVVPRFAAAIMIAVALTAVVCF 184

Query: 277 SAIIGASI--VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
              +GA +  V W+    P   F S F S AT  ++   ++KA      + +V+ ++G +
Sbjct: 185 VGFLGAYLFNVYWQ-GGAP-GSFVSTFASFATPDDMVLAVLKAIIYGAIVAVVSCQKGLS 242

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
                  +   V   VV+SI ++++++   +  Y
Sbjct: 243 TKGGPIGVANSVNAAVVESILLLMVVNVAISQLY 276


>gi|255011705|ref|ZP_05283831.1| hypothetical protein Bfra3_21365 [Bacteroides fragilis 3_1_12]
 gi|313149539|ref|ZP_07811732.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313138306|gb|EFR55666.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 247

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 116/227 (51%), Gaps = 25/227 (11%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           + + F    I+++  +GV+ + +V+LISF  GAVI  Q    +       +++  ++   
Sbjct: 24  RMRMFFRQYIKEIEQLGVNSIGIVLLISFFIGAVITIQIKLNIESPWMPRWTVGYVT--- 80

Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
            REI +L     +  +++AG+ GS I +E+G+M++ ++IDA+  MG++    LI P+I A
Sbjct: 81  -REILLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGVNSANYLILPKITA 139

Query: 263 LIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAV---FFSRFHSTATLANIFTGL 314
           ++  +P+L   + F+ IIGA    W        D+ + +   F   F        ++ G+
Sbjct: 140 MVTMIPILVTFSIFAGIIGAFATCWFGGIMTATDLEYGLQYMFVEWF--------VWCGI 191

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D
Sbjct: 192 IKSLFFAFIIASVSSFFGYTVEGGSIEVGKASTDSVVSSSVLILFAD 238


>gi|53715368|ref|YP_101360.1| hypothetical protein BF4084 [Bacteroides fragilis YCH46]
 gi|253567257|ref|ZP_04844707.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|265767855|ref|ZP_06095387.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|52218233|dbj|BAD50826.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
 gi|251944088|gb|EES84607.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|263252527|gb|EEZ24055.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 247

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 116/227 (51%), Gaps = 25/227 (11%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           + + F    I+++  +GV+ + +V+LISF  GAVI  Q    +       +++  ++   
Sbjct: 24  RMRMFFRQYIKEIEQLGVNSIGIVLLISFFIGAVITIQIKLNIESPWMPRWTVGYVT--- 80

Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
            REI +L     +  +++AG+ GS I +E+G+M++ ++IDA+  MG++    LI P+I A
Sbjct: 81  -REILLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGVNSANYLILPKITA 139

Query: 263 LIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAV---FFSRFHSTATLANIFTGL 314
           ++  +P+L   + F+ IIGA    W        D+ + +   F   F        ++ G+
Sbjct: 140 MVTMIPILVTFSIFAGIIGAFATCWFGGIMTATDLEYGLQYMFVEWF--------VWCGI 191

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D
Sbjct: 192 IKSLFFAFIIASVSSFFGYTVEGGSIEVGKASTDSVVSSSVLILFAD 238


>gi|123969056|ref|YP_001009914.1| putative transporter, membrane component [Prochlorococcus marinus
           str. AS9601]
 gi|123199166|gb|ABM70807.1| possible transporter, membrane component [Prochlorococcus marinus
           str. AS9601]
          Length = 251

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 105/211 (49%), Gaps = 7/211 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L  Q+   G   + +V++     G V   Q A QL+  G       L+++   RE+  LL
Sbjct: 34  LFDQLMESGPGSLLIVLITGIAAGTVFNIQVASQLTSMGVSSEIGGLLAVGMAREMAPLL 93

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA ++ G+  +A  A++G+MK+ E+I+AI  +  + V+ L+ PR+ +++I  P+  +L  
Sbjct: 94  TATLMTGKVATAYAAQLGTMKVTEQIEAITMLRTEPVQYLVVPRLLSMVIMSPIQCLL-- 151

Query: 276 FSAIIGASIVIWK--YYDIPFAVFFSRFHS---TATLANIFTGLIKAPFMACAIGIVAMK 330
           F ++   S  IW   +Y +P  VF++   S   + T  ++ + LIK+      I I+A  
Sbjct: 152 FLSVALWSGQIWSTIFYKVPPIVFWTSVRSGNVSLTSTDLTSMLIKSVVFGLLISIIACG 211

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            G         +G   T  VV ++  V ++D
Sbjct: 212 YGLTTKGGPKEVGTSTTGAVVMTLVTVSLMD 242


>gi|325855171|ref|ZP_08171794.1| hypothetical protein HMPREF9303_0352 [Prevotella denticola CRIS
           18C-A]
 gi|327312571|ref|YP_004328008.1| hypothetical protein HMPREF9137_0267 [Prevotella denticola F0289]
 gi|325483908|gb|EGC86852.1| hypothetical protein HMPREF9303_0352 [Prevotella denticola CRIS
           18C-A]
 gi|326944406|gb|AEA20291.1| conserved hypothetical protein [Prevotella denticola F0289]
          Length = 248

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 110/224 (49%), Gaps = 14/224 (6%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSIL 206
           + + FL   +++M  +GV  + +V+LISF  GAVI  Q    + S +     S  +   +
Sbjct: 26  RMRMFLKRYVKEMSQLGVDSIGIVLLISFFIGAVICIQIKLNVQSPWMPHWVSGYVTREI 85

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            L E    +  ++++G+ GS I +E+G+M++ ++IDA+  MG++    LI P++  LI  
Sbjct: 86  MLLEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALEIMGINSASYLILPKMLGLITI 145

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT------GLIKAPFM 320
           +P L I +  + IIGA      Y         +    TA L + F        +IK  F 
Sbjct: 146 MPFLVIFSAATGIIGA------YATAYIGHIITPIDLTAGLQHDFNPWFMWMSIIKGFFF 199

Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A  I  V+   G+ V   S  +GK  T  VV S S++I+   +F
Sbjct: 200 AFIISSVSSYMGYTVKGGSVEVGKASTDAVVCS-SVLILFSDVF 242


>gi|300784333|ref|YP_003764624.1| ABC transporter permease [Amycolatopsis mediterranei U32]
 gi|299793847|gb|ADJ44222.1| ABC transport system permease protein [Amycolatopsis mediterranei
           U32]
          Length = 262

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 106/202 (52%), Gaps = 6/202 (2%)

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
           L++   GAVIA Q     +Q GA+ F+    ++  +++   L+TA+++AG  GSA+ A+I
Sbjct: 58  LVAIPFGAVIALQLGSLTAQIGAQSFTGAASALAIVQQASPLITALLVAGAGGSAVCADI 117

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA---SIVIWKY 289
           G+ KI EEIDA+  +G++ ++ LI PR+ A ++   LL  L +   ++G    ++V+   
Sbjct: 118 GARKIREEIDAMEVLGVNPIQRLIVPRVLAAMVVSVLLNGLVSVVGVLGGYFFNVVL--Q 175

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
              P A + + F++ A + +++   IKA       G+VA   G         +G  V   
Sbjct: 176 GGTPGA-YLASFNALAQVPDLWVSEIKALLYGFVAGVVAAFRGLNPAGGPKGVGDAVNQA 234

Query: 350 VVQSISIVIIIDSLFAIFYFAI 371
           VV +  ++ +I+ +    Y  I
Sbjct: 235 VVITFLLLFLINVVLTAIYLRI 256


>gi|91070390|gb|ABE11304.1| putative transporter, membrane component [uncultured
           Prochlorococcus marinus clone HF10-88H9]
          Length = 251

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 105/211 (49%), Gaps = 7/211 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L  Q+   G   + +V++     G V   Q A QL+  G       L+++   RE+  LL
Sbjct: 34  LFDQLMESGPGSLLIVLITGIAAGTVFNIQVASQLTSMGVSSEIGGLLAVGMAREMAPLL 93

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA ++ G+  +A  A++G+MK+ E+I+AI  +  + V+ L+ PR+ +++I  P+  +L  
Sbjct: 94  TATLMTGKVATAYAAQLGTMKVTEQIEAITMLRTEPVQYLVVPRLLSMVIMSPIQCLL-- 151

Query: 276 FSAIIGASIVIWK--YYDIPFAVFFSRFHS---TATLANIFTGLIKAPFMACAIGIVAMK 330
           F ++   S  IW   +Y +P  VF++   S   + T  ++ + LIK+      I I+A  
Sbjct: 152 FLSVALWSGQIWSTIFYKVPPIVFWTSVRSGNVSLTSTDLTSMLIKSVVFGLLISIIACG 211

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            G         +G   T  VV ++  V ++D
Sbjct: 212 YGLTTKGGPKEVGTSTTGAVVMTLVTVSLMD 242


>gi|323343316|ref|ZP_08083543.1| ABC superfamily ATP binding cassette transporter permease protein
           [Prevotella oralis ATCC 33269]
 gi|323095135|gb|EFZ37709.1| ABC superfamily ATP binding cassette transporter permease protein
           [Prevotella oralis ATCC 33269]
          Length = 260

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 112/219 (51%), Gaps = 4/219 (1%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSIL 206
           + + F    +++M  +G+  + +V+LISF  GAVI  Q    + S +     S      +
Sbjct: 38  RMRMFFKQYVKEMSQLGIDSIGIVLLISFFIGAVICIQMKLNIQSPWMPRWVSGYTTREI 97

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            L E    +  +++AG+ GS I +E+G+M++ ++IDA+  MG++    LI P+I  L+  
Sbjct: 98  MLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALDIMGVNSASYLILPKIMGLVTI 157

Query: 267 LPLLTILANFSAIIGASIVIW-KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325
           +P L I ++ + I+GA    +  +   P  +     HS      ++  +IK+ F A  I 
Sbjct: 158 MPFLVIFSSLTGILGAYGTAYIGHILTPEDLTLGLQHSFNPWF-VWMSIIKSLFFAFIIA 216

Query: 326 IVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            V+   G++V   S  +GK  T  VV S S++I+   +F
Sbjct: 217 SVSSYFGYSVEGGSVEVGKASTDAVVSS-SVLILFSDVF 254


>gi|125549278|gb|EAY95100.1| hypothetical protein OsI_16916 [Oryza sativa Indica Group]
          Length = 345

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 106/215 (49%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           +L+ Q+  VG     V +L +   G     Q   + ++ G       ++++   RE+  +
Sbjct: 119 NLLAQLRRVGPGSAGVSLLTAAFVGMAFTIQFVREFTRLGLHRSVGGVLALALSRELSPV 178

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TAV+ AGR GSA  AE+G+M+++E+ D +R +G   V  L+ PR+ A +++LP+LT+++
Sbjct: 179 VTAVVAAGRVGSAFAAELGTMQVSEQTDTLRVLGAQPVDYLVVPRVVACVLALPVLTLMS 238

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
               +  ++ +    + +  ++            ++ + L+K+      I +V+   G  
Sbjct: 239 FALGLASSAFLADSIFGVSTSIILESARRALRPWDLISSLLKSQVFGAIIAVVSCAWGVT 298

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               +  +G+  T+ VV S+  + + D   +  +F
Sbjct: 299 THGGAKGVGESTTSAVVVSLVGIFVADFALSCLFF 333


>gi|226304401|ref|YP_002764359.1| YrbE family protein [Rhodococcus erythropolis PR4]
 gi|226183516|dbj|BAH31620.1| putative YrbE family protein [Rhodococcus erythropolis PR4]
          Length = 269

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 94/182 (51%), Gaps = 2/182 (1%)

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
            + GA  +S  +++ + + +   L+ A+M+AG +GSAI  ++GS KI EEIDA+  MG+D
Sbjct: 82  GRIGAGGYSGAVVAFIIVGQAAALVCALMMAGVAGSAICTDLGSRKIREEIDAMEVMGID 141

Query: 251 FVRILISPR-IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
            +  L++PR + A+I+SL L +++  F  +I   +       +P   F + F      ++
Sbjct: 142 VIERLVAPRLVAAVIVSLALCSMV-TFGGVIACYLYHIYVQHLPAGTFMATFSQYGRSSD 200

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               L+KA     A  +VA  +G         +   V   VV + ++V I++++ +  Y 
Sbjct: 201 FVMALVKAAIFGLASTLVATFKGLHAKGGPRGVADAVNEAVVIAFALVFIVNTVLSALYT 260

Query: 370 AI 371
            I
Sbjct: 261 VI 262


>gi|325673338|ref|ZP_08153030.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Rhodococcus equi ATCC 33707]
 gi|325555928|gb|EGD25598.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Rhodococcus equi ATCC 33707]
          Length = 269

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 88/181 (48%)

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
            + GA  +S  +++ + + +   L+ A+M+AG +GSAI  ++GS KI EEIDA+  MG+D
Sbjct: 82  GRIGAGGYSGAVVAFIIVGQASALVCALMMAGVAGSAICTDLGSRKIREEIDAMEVMGID 141

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
            V  L++PR+ A ++    L  +  F  ++   +       +P   F + F      A+ 
Sbjct: 142 VVERLVAPRLLAAVVVSVALCAMVTFGGVMACYLYHIYVQHLPAGTFLATFGQYGRTADF 201

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
              L+KA   A    +VA  +G         +   V   VV + ++V ++++  +  Y  
Sbjct: 202 VMALVKAAIFALTSTLVATFKGLHAKGGPRGVADAVNEAVVIAFALVFVVNTALSALYTV 261

Query: 371 I 371
           I
Sbjct: 262 I 262


>gi|282866015|ref|ZP_06275063.1| protein of unknown function DUF140 [Streptomyces sp. ACTE]
 gi|282559054|gb|EFB64608.1| protein of unknown function DUF140 [Streptomyces sp. ACTE]
          Length = 283

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 109/228 (47%), Gaps = 8/228 (3%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
            ++F+ F    + Q ++V    +    L+S   GAVIA Q      Q GA+ F+     +
Sbjct: 56  PFQFREF----VEQFWFVASVTILPAALVSIPFGAVIALQVGSLTEQLGAQSFTGGASVL 111

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
             +++   L+ A++IAG +GSAI A++GS KI EE+DA+  MG+  V+ L+ PR+ A + 
Sbjct: 112 AVIQQASPLIVALLIAGAAGSAICADLGSRKIREELDAMEVMGVSPVQRLVVPRVLATMG 171

Query: 266 SLPLLTILANFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323
              LL  L +    +G     VI +    P A + + F + A L +++ G +KA      
Sbjct: 172 VAVLLNGLVSVVGTLGGYFFNVIMQ-GGTPGA-YLASFSALAQLPDLYIGELKALIFGFI 229

Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
            GIVA   G         +G  V   VV +  ++  ++      Y  I
Sbjct: 230 AGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFAVNMALTAIYLQI 277


>gi|229494168|ref|ZP_04387931.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
 gi|229318530|gb|EEN84388.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
          Length = 269

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 94/182 (51%), Gaps = 2/182 (1%)

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
            + GA  +S  +++ + + +   L+ A+M+AG +GSAI  ++GS KI EEIDA+  MG+D
Sbjct: 82  GRIGAGGYSGAVVAFIIVGQAAALVCALMMAGVAGSAICTDLGSRKIREEIDAMEVMGID 141

Query: 251 FVRILISPR-IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
            +  L++PR + A+I+SL L +++  F  +I   +       +P   F + F      ++
Sbjct: 142 VIERLVAPRLVAAVIVSLALCSMV-TFGGVIACYLYHIYVQHLPAGTFMATFSQYGRSSD 200

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               L+KA     A  +VA  +G         +   V   VV + ++V I++++ +  Y 
Sbjct: 201 FVMALVKAAVFGIASTLVATFKGLHAKGGPRGVADAVNEAVVIAFALVFIVNTVLSALYT 260

Query: 370 AI 371
            I
Sbjct: 261 VI 262


>gi|83584337|gb|ABC24943.1| plastid permease-like protein [Prototheca wickerhamii]
          Length = 248

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 71/118 (60%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + Q+  VG   + V +L SF  G V   Q   + ++ G       ++ +   RE+  ++T
Sbjct: 115 LEQLNLVGPRSLGVCLLTSFFLGMVFTIQFIREFTRLGLTRTVGGVLGLALARELTPVVT 174

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           ++++AGR GSA  AE+G+M+++E+ D++R +G D +  LI+PRI A +I+ PLL I+ 
Sbjct: 175 SIIVAGRVGSAFAAELGTMQVSEQTDSLRVLGSDPIDYLITPRILACMIATPLLNIMC 232


>gi|318042383|ref|ZP_07974339.1| putative transporter, membrane component [Synechococcus sp. CB0101]
          Length = 261

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 125/267 (46%), Gaps = 18/267 (6%)

Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167
           + L   +  + +  + +SC    ++G      G+  A+  K +  +  L+ ++   G   
Sbjct: 8   RRLPAWLRPRCLTRLGESC----LIG------GQAMAALAKGQVGINDLMAELMEAGPGS 57

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
             +VI+     G V   Q A +L + GA      ++++   REI  +LTA ++ G+  +A
Sbjct: 58  FLIVIITGLAAGTVFNIQAASELVKQGAGSTVGGILALGLAREIAPILTATLVTGKVATA 117

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI----LANFSAIIGAS 283
             A++G+MK+ E+IDAI  +  D V+ L+ PR+ A++I  P+  +    +A +S  + ++
Sbjct: 118 YAAQLGTMKVTEQIDAITMLRTDPVQYLVVPRVLAMLIMTPVQCLAFFAVAMWSGQVSST 177

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           ++    Y IP  VF++   +    +++   L+KA      I +++   G         +G
Sbjct: 178 LL----YQIPPGVFWNSVRTWMEPSDLPAMLLKAVVFGLQIAVISCGWGLTTRGGPKEVG 233

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370
              T  VV  +  V ++D +     F 
Sbjct: 234 TSTTGAVVMILVTVSLMDVVLTQLLFG 260


>gi|284039999|ref|YP_003389929.1| hypothetical protein Slin_5158 [Spirosoma linguale DSM 74]
 gi|283819292|gb|ADB41130.1| protein of unknown function DUF140 [Spirosoma linguale DSM 74]
          Length = 243

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/141 (34%), Positives = 81/141 (57%), Gaps = 7/141 (4%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM---- 203
           K   +L  +I +   +GV  + +V L++   GAV   Q A+ L+      + I L+    
Sbjct: 20  KLSVYLGLIINECTSIGVGSIFIVALVNIFIGAVTCVQTAYNLTNPFVPKYIIALIVRDS 79

Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263
           SIL+L      L+ +++AG+ GS I +E+G+M+I E++DA+  MG++    LI P++ A 
Sbjct: 80  SILELAPT---LSCIVLAGKVGSNIASELGTMRITEQVDALEVMGINSSSYLILPKVIAS 136

Query: 264 IISLPLLTILANFSAIIGASI 284
           ++  PLL I+A F AI+G  I
Sbjct: 137 VLMFPLLVIMAAFLAILGGYI 157


>gi|312137895|ref|YP_004005231.1| integral membrane protein yrbe1a [Rhodococcus equi 103S]
 gi|311887234|emb|CBH46543.1| putative integral membrane protein YrbE1A [Rhodococcus equi 103S]
          Length = 258

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 88/181 (48%)

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
            + GA  +S  +++ + + +   L+ A+M+AG +GSAI  ++GS KI EEIDA+  MG+D
Sbjct: 71  GRIGAGGYSGAVVAFIIVGQASALVCALMMAGVAGSAICTDLGSRKIREEIDAMEVMGID 130

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
            V  L++PR+ A ++    L  +  F  ++   +       +P   F + F      A+ 
Sbjct: 131 VVERLVAPRLLAAVVVSVALCAMVTFGGVMACYLYHIYVQHLPAGTFLATFGQYGRTADF 190

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
              L+KA   A    +VA  +G         +   V   VV + ++V ++++  +  Y  
Sbjct: 191 VMALVKAAIFALTSTLVATFKGLHAKGGPRGVADAVNEAVVIAFALVFVVNTALSALYTV 250

Query: 371 I 371
           I
Sbjct: 251 I 251


>gi|168022425|ref|XP_001763740.1| ATP-binding cassette transporter, subfamily I, member 14, ABC
           component protein PpABCI14 [Physcomitrella patens subsp.
           patens]
 gi|162684984|gb|EDQ71382.1| ATP-binding cassette transporter, subfamily I, member 14, ABC
           component protein PpABCI14 [Physcomitrella patens subsp.
           patens]
          Length = 263

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 110/214 (51%), Gaps = 2/214 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           ++Q+  VG   + V +L +   G V   Q   + ++ G       ++++   RE+  ++T
Sbjct: 39  LQQLELVGPRSLGVSLLTASFVGMVFTIQFVREFARLGLTRSVGGVLALALARELSPVVT 98

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A+++AGR GSA  AE+G+M+++E+ D +R +  D V  L++PR+ A  ++LP+LT +  F
Sbjct: 99  AIIMAGRVGSAFAAELGTMQVSEQTDTLRVLRTDPVDYLVTPRVIACCLALPILTTMC-F 157

Query: 277 SAIIGASIVIW-KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
           +  + AS+++    Y++   +            ++ +  IK+      I IV+   G   
Sbjct: 158 AVAMAASVLLADSVYNVSANIILESAARALQPWDLISTTIKSVVFGGIISIVSCTWGVTT 217

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              +  +G+  T+ VV S+  + I D + +  +F
Sbjct: 218 LGGAKGVGESTTSAVVISLVCIFIADFILSWVFF 251


>gi|291298382|ref|YP_003509660.1| hypothetical protein Snas_0856 [Stackebrandtia nassauensis DSM
           44728]
 gi|290567602|gb|ADD40567.1| protein of unknown function DUF140 [Stackebrandtia nassauensis DSM
           44728]
          Length = 253

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 104/213 (48%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I+Q +++    +    L++   GAVIA Q      Q GAE F+     +  +RE G ++T
Sbjct: 33  IKQAWFIASVSILPTALVAIPFGAVIALQLGSLSKQIGAESFAGAASVLAVVREAGPIVT 92

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++I+G  GSA+ A++G+ KI EE+DA+ T+G+D ++ L+ PR++A  +    L  + + 
Sbjct: 93  ALLISGAGGSAMCADLGARKIREELDAMETLGVDPIQRLVVPRMFAGAVVAFFLNGVVSA 152

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
             I G  I      D     + + F +   +A++ +  ++A        ++A   G    
Sbjct: 153 VGIAGGYIFNVYMQDGTPGSYLASFAALGQVADVVSAQLRAIVFGMVAALIACYLGMNAK 212

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
                +G+ V   VV +  ++   + +    YF
Sbjct: 213 GGPKGVGQAVNVSVVVNFMVLFAFNFVMVALYF 245


>gi|317968902|ref|ZP_07970292.1| putative transporter, membrane component [Synechococcus sp. CB0205]
          Length = 257

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 106/219 (48%), Gaps = 8/219 (3%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI ++   G     ++++     G V   Q A +L + GA      ++++   REI  +L
Sbjct: 42  LIAELMEAGPGSFLIILITGLAAGTVFNIQAASELVKQGAGSTVGGILALGLAREIAPIL 101

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI--- 272
           TA ++ G+  +A  A++G+MK+ E+IDAI  +  D V+ L+ PR+ A+++  P+  +   
Sbjct: 102 TATLVTGKVATAYAAQLGTMKVTEQIDAITMLRTDPVQYLVVPRLLAMVVMTPVQCLAFF 161

Query: 273 -LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
            +A +S  + ++I+    Y+IP  VF++        +++   L+KA      I ++A   
Sbjct: 162 GVAIWSGQVSSAIL----YNIPPDVFWTSVRGWMQPSDLPAMLLKAGVFGLQIAVIACGW 217

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G         +G   T  VV  +  V ++D +     F 
Sbjct: 218 GLTTRGGPKEVGTSTTGAVVMILVTVSLMDVVLTQLLFG 256


>gi|261880035|ref|ZP_06006462.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Prevotella bergensis DSM 17361]
 gi|270333275|gb|EFA44061.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Prevotella bergensis DSM 17361]
          Length = 252

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 14/224 (6%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSIL 206
           + + FL   +++M  +GV  + +V+LISF  GAVI  Q    + S +     +      +
Sbjct: 30  RMRMFLKRYVKEMAQLGVDSIGIVLLISFFIGAVICIQMKVNIQSPWMPRWVTGYTTREI 89

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            L E    +  +++AG+ GS I +E+G+M++ ++IDA+  MG++    LI P+I  L+  
Sbjct: 90  MLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALDIMGINSASYLILPKIAGLVTI 149

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT------GLIKAPFM 320
           +P L I ++   I+GA      Y         S    TA + + F        +IK+ F 
Sbjct: 150 MPFLVIFSSAMGIVGA------YATAYIGQLMSPADLTAGMNHSFNEWYMWMSIIKSLFF 203

Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A  I  V+   G++V   S  +G+  T  VV S S++I+   +F
Sbjct: 204 AFIIASVSSYFGYSVKGGSVDVGEASTDAVVSS-SVLILFSDVF 246


>gi|297603137|ref|NP_001053506.2| Os04g0553000 [Oryza sativa Japonica Group]
 gi|38345475|emb|CAE01691.2| OSJNBa0010H02.13 [Oryza sativa Japonica Group]
 gi|255675668|dbj|BAF15420.2| Os04g0553000 [Oryza sativa Japonica Group]
          Length = 344

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 106/215 (49%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           +L+ Q+  VG     V +L +   G     Q   + ++ G       ++++   RE+  +
Sbjct: 118 NLLAQLRRVGPGSAGVSLLTAAFVGMAFTIQFVREFTRLGLHRSVGGVLALALSRELSPV 177

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TAV+ AGR GSA  AE+G+M+++E+ D +R +G   V  L+ PR+ A +++LP+LT+++
Sbjct: 178 VTAVVAAGRVGSAFAAELGTMQVSEQTDTLRVLGAQPVDYLVVPRVVACVLALPVLTLMS 237

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
               +  ++ +    + +  ++            ++ + L+K+      I +V+   G  
Sbjct: 238 FALGLASSAFLADSIFGVSTSIILESARRALRPWDLISSLLKSQVFGAIIAVVSCAWGVT 297

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               +  +G+  T+ VV S+  + + D   +  +F
Sbjct: 298 THGGAKGVGESTTSAVVVSLVGIFVADFALSCLFF 332


>gi|117164593|emb|CAJ88139.1| putative ABC-transporter integral membrane protein [Streptomyces
           ambofaciens ATCC 23877]
          Length = 254

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 4/206 (1%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
            ++F+ F    + Q +++    +    L+S   GAVIA Q      Q GA+ F+     +
Sbjct: 27  PFQFREF----VEQFWFIASVTILPAALVSIPFGAVIALQVGSLTQQLGAQSFTGGASVL 82

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
             +++   L+ A++IAG +GSAI A++GS  I EE+DA+  MG+  V+ L+ PR+ A + 
Sbjct: 83  AVVQQASPLIVALLIAGAAGSAICADLGSRTIREELDAMEVMGVSPVQRLVVPRVLATMG 142

Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325
              LL  L +   I+G  +      D     + S F + A L +++   +KA       G
Sbjct: 143 VAVLLNGLVSVVGILGGYVFNVFLQDGTPGAYLSSFSALAQLPDLYVSELKALVFGFIAG 202

Query: 326 IVAMKEGFAVGVHSNSLGKKVTTCVV 351
           +VA   G         +G  V   VV
Sbjct: 203 VVAAYRGLNPRGGPKGVGDAVNQSVV 228


>gi|123966718|ref|YP_001011799.1| putative transporter, membrane component [Prochlorococcus marinus
           str. MIT 9515]
 gi|123201084|gb|ABM72692.1| possible transporter, membrane component [Prochlorococcus marinus
           str. MIT 9515]
          Length = 251

 Score = 72.8 bits (177), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 117/234 (50%), Gaps = 9/234 (3%)

Query: 144 ASSYKFKGFLL--SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSID 201
           A +Y FKG +    L  Q+   G   + +V++     G V   Q A QL+  G       
Sbjct: 20  AINYIFKGKISKNDLFEQLMESGPGSLLIVLITGVAAGTVFNIQVASQLTSMGVSSEIGG 79

Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261
           L+++   RE+  LLTA ++ G+  +A  A++G+MK+ E+I+AI  +  + ++ L+ PR+ 
Sbjct: 80  LLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTEQIEAITMLRTEPIQYLVVPRLL 139

Query: 262 ALIISLPLLTILANFSAIIGASIVIWK--YYDIPFAVFFSRFHS---TATLANIFTGLIK 316
           ++II  P+  +L  F ++   S  IW   +Y++P +VF++   S   + + +++ + +IK
Sbjct: 140 SMIIMSPIQCLL--FLSVALWSGQIWSTIFYNVPPSVFWTSVRSGNVSLSSSDLSSMIIK 197

Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +      I I+A   G         +G   T  VV ++  V ++D +     F 
Sbjct: 198 SVVFGLLISIIACGYGLTTKGGPKEVGTSTTGAVVMTLVTVSLMDVVLTQILFG 251


>gi|326383821|ref|ZP_08205506.1| YrbE family protein [Gordonia neofelifaecis NRRL B-59395]
 gi|326197585|gb|EGD54774.1| YrbE family protein [Gordonia neofelifaecis NRRL B-59395]
          Length = 258

 Score = 72.8 bits (177), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 118/241 (48%), Gaps = 4/241 (1%)

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG-VSGVPVVILISFVTGAVIAQQGAF 188
           H LG  +   G    +  +F+  L   + Q  ++G VS  P ++L+  V G  IA     
Sbjct: 10  HTLGFALQAIGSLFVAIARFRLSLSETLNQTVFIGRVSTGPSLLLMIPV-GVFIAVSVGE 68

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
              + GA  +S  +++ + + +   L+ A+M+AG +GSAI  ++GS KI EEIDA+  MG
Sbjct: 69  LAGRIGAGGYSGAVVAFIIVGQASSLVCALMMAGVAGSAICTDLGSRKIREEIDAMEVMG 128

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD-IPFAVFFSRFHSTATL 307
           ++ +  L++PRI A II   +L  L   +  +GA  +   Y   +P   F + F     +
Sbjct: 129 VNILERLVAPRIAAAIIVALVLCSLITVTG-VGACFLYHVYVQHLPAGSFMATFSQYGRM 187

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           ++    L+K+   A    IVA  +G       + +   V   VV + ++V + +++ +  
Sbjct: 188 SDFVMALVKSSIFALLATIVACFKGLHARGGPSGVADAVNEAVVIAFALVFVFNTVLSQL 247

Query: 368 Y 368
           Y
Sbjct: 248 Y 248


>gi|149921452|ref|ZP_01909904.1| ABC-type transport system involved in resistance to organic
           solvents [Plesiocystis pacifica SIR-1]
 gi|149817655|gb|EDM77122.1| ABC-type transport system involved in resistance to organic
           solvents [Plesiocystis pacifica SIR-1]
          Length = 259

 Score = 72.8 bits (177), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 93/192 (48%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I Q    G   + ++ +++   G  ++ Q      +FG +        +  +RE+  ++ 
Sbjct: 44  ITQFVDAGWGSLALLTMLTAFAGLNLSVQSYASFERFGGQDLLGMFAGVGGVRELYPVMA 103

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV+   R G+ + A + +M+I+E+I+A+  M +D +  LISPR+WA+ ++LPLL   A+ 
Sbjct: 104 AVVCGARIGANLAASLANMRISEQIEALEVMAVDPLDYLISPRLWAVTLALPLLCGYADV 163

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
             I  +        D+    F ++      L +I  G++K   M   + ++A   G++V 
Sbjct: 164 VGIAASYAGAVYQLDLDAGSFMTQIQEQVGLVDIGAGMLKGLIMGWLVAVIACFHGYSVS 223

Query: 337 VHSNSLGKKVTT 348
               + G  ++T
Sbjct: 224 KRDGADGVGIST 235


>gi|239945573|ref|ZP_04697510.1| putative YrbE family protein [Streptomyces roseosporus NRRL 15998]
 gi|239992040|ref|ZP_04712704.1| putative YrbE family protein [Streptomyces roseosporus NRRL 11379]
          Length = 293

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 100/215 (46%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I Q ++V    +    L+S   GAVIA Q      Q GA+ F+     +  +++   L+ 
Sbjct: 73  IEQFWFVASVTILPAALVSIPFGAVIALQVGSLTQQLGAQSFTGGASVLAVIQQASPLIV 132

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++I+G +GSAI A++GS KI EE+DA+  MG+  ++ L+ PR+ A ++   LL  L + 
Sbjct: 133 ALLISGAAGSAICADLGSRKIREELDAMEVMGVSPIQRLVVPRVLATMLVAVLLNGLISV 192

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
              +G         D     + + F + A L +++    KA       GIVA   G    
Sbjct: 193 VGTLGGYFFNVIMQDGTPGAYLASFSALAQLPDLYISEFKALIFGFIAGIVAAYRGLNPR 252

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
                +G  V   VV +  ++  ++ +    Y  I
Sbjct: 253 GGPKGVGDAVNQSVVITFMLLFFVNMVLTAIYLQI 287


>gi|254512036|ref|ZP_05124103.1| membrane protein [Rhodobacteraceae bacterium KLH11]
 gi|221535747|gb|EEE38735.1| membrane protein [Rhodobacteraceae bacterium KLH11]
          Length = 260

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 101/195 (51%), Gaps = 7/195 (3%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +PVV L +  TG  +A Q     ++F AE     +++I  +RE+G +L  +MIA R  S+
Sbjct: 57  LPVVGLTAIFTGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSS 116

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I AEI +MK+ E+IDA+ T+    ++ L +PR+ A +I++P+L  + +   I G   V  
Sbjct: 117 IAAEIATMKVTEQIDALVTLSTHPMKYLTAPRVLAALITVPVLVGVGDIIGIAGGYTVAT 176

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV- 346
           +      A +         + +I + L+K      A G++A   G   G++S    + V 
Sbjct: 177 QNLGFNPAAYLKNTVDFLEMRDIVSSLVK----GAAFGVIAAIMGCYYGMNSGRGAQGVG 232

Query: 347 --TTCVVQSISIVII 359
             T   V++ +++I+
Sbjct: 233 RATKGSVEAAAVLIL 247


>gi|86137545|ref|ZP_01056122.1| membrane protein [Roseobacter sp. MED193]
 gi|85825880|gb|EAQ46078.1| membrane protein [Roseobacter sp. MED193]
          Length = 260

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 74/125 (59%), Gaps = 10/125 (8%)

Query: 156 LIRQMYY----------VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
           ++R  YY          +G   +PVV L +  TG  +A Q     ++F AE     +++I
Sbjct: 35  MLRPPYYPRELALSLLQIGWLSLPVVALTAVFTGGALALQIYAGGARFNAEAVVPQIVAI 94

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
             +RE+G +L  +MIA R  S+I AEI +MK+ E+IDA+ T+  + ++ L++PR+ A ++
Sbjct: 95  GMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQIDALVTLSTNPMQYLVAPRVLAALL 154

Query: 266 SLPLL 270
           ++P+L
Sbjct: 155 TVPVL 159


>gi|297190651|ref|ZP_06908049.1| ABC-transporter integral membrane protein [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|197719878|gb|EDY63786.1| ABC-transporter integral membrane protein [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 281

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 105/221 (47%), Gaps = 4/221 (1%)

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           L   I Q ++V    +    L+S   GAVIA Q      Q GA+ F+     +  +++  
Sbjct: 57  LREFIEQFWFVASVTILPAALVSIPFGAVIALQVGSLTQQLGAQSFTGGASVLAVIQQAS 116

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            L+ A++IAG  GSAI A++GS KI EE+DA+  MG+  V+ L+ PR+ A ++   LL  
Sbjct: 117 PLIVALLIAGAGGSAICADLGSRKIREELDAMEVMGVSPVQRLVVPRVLATMLVAVLLNG 176

Query: 273 LANFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330
           + +    +G     VI +    P A + + F + A L +++   +KA       GIVA  
Sbjct: 177 MVSVVGTLGGYFFNVIMQ-GGTPGA-YLASFSALAQLPDLYVSELKALIFGFIAGIVAAY 234

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
            G         +G  V   VV +  ++  ++ +    Y  I
Sbjct: 235 RGLGPRGGPKGVGDAVNQSVVITFMLLFFVNMVLTAIYLQI 275


>gi|84684701|ref|ZP_01012601.1| membrane protein [Maritimibacter alkaliphilus HTCC2654]
 gi|84667036|gb|EAQ13506.1| membrane protein [Rhodobacterales bacterium HTCC2654]
          Length = 244

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 23/201 (11%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L R    +G   +PVV L +  TGA +A Q     S+  AE     +++I  +RE+G ++
Sbjct: 29  LARAFLQIGWLSLPVVGLTAVFTGAALALQIYAGGSRISAEAVVPQIVAIGIVRELGPVM 88

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
             +MIA R  S+I AE+ +MK++E++DA+ T+  D +  L +PR+ A ++++P+L  L +
Sbjct: 89  VGLMIAARVTSSIAAELATMKVSEQVDALTTLSTDPMTYLTAPRVLAGLVTVPILVGLGD 148

Query: 276 FSAIIGASIVI---------------WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320
              + G  +V                W + D P  +  S      T   +F G+  A  +
Sbjct: 149 ILGLFGGFVVATQGLGFNGPSYVTTSWNFLD-PVDIVLSL-----TKGAVFGGI--AVTL 200

Query: 321 ACAIGIVAMKEGFAVGVHSNS 341
           AC  G+ A +    VG+ + S
Sbjct: 201 ACHAGLNAGRGAQGVGLATKS 221


>gi|257054442|ref|YP_003132274.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Saccharomonospora viridis
           DSM 43017]
 gi|256584314|gb|ACU95447.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Saccharomonospora viridis
           DSM 43017]
          Length = 250

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 108/224 (48%), Gaps = 4/224 (1%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
            ++F+ F    I+Q +++    +    L++   GAVI+ Q      Q GA+ ++     +
Sbjct: 23  PFQFREF----IQQAWFIASVTILPTALVAIPFGAVISMQFGSLAKQLGAQSYTGAGSVL 78

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
             +++   L+ A+++AG  GSAI A+IG+  I EEIDA+  +G+  V+ L+ PR+ A + 
Sbjct: 79  ATVQQASPLVVALLVAGAGGSAICADIGARTIREEIDAMEVLGVSAVQRLVVPRVLACMF 138

Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325
              LL  + +   ++G         D     + + F + A L++++ G IKA        
Sbjct: 139 VALLLNGMVSVIGVLGGYFFNVVLQDGTPGAYLASFSALAQLSDLWIGEIKALIFGFIAA 198

Query: 326 IVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           +VA   G         +G  V   VV +  ++ +++++  + Y 
Sbjct: 199 VVAAYRGLNPPPGPKGVGDAVNQSVVITFLLLFVVNTVLTLIYL 242


>gi|291449028|ref|ZP_06588418.1| ABC-transporter integral membrane protein [Streptomyces roseosporus
           NRRL 15998]
 gi|291351975|gb|EFE78879.1| ABC-transporter integral membrane protein [Streptomyces roseosporus
           NRRL 15998]
          Length = 253

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 100/215 (46%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I Q ++V    +    L+S   GAVIA Q      Q GA+ F+     +  +++   L+ 
Sbjct: 33  IEQFWFVASVTILPAALVSIPFGAVIALQVGSLTQQLGAQSFTGGASVLAVIQQASPLIV 92

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++I+G +GSAI A++GS KI EE+DA+  MG+  ++ L+ PR+ A ++   LL  L + 
Sbjct: 93  ALLISGAAGSAICADLGSRKIREELDAMEVMGVSPIQRLVVPRVLATMLVAVLLNGLISV 152

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
              +G         D     + + F + A L +++    KA       GIVA   G    
Sbjct: 153 VGTLGGYFFNVIMQDGTPGAYLASFSALAQLPDLYISEFKALIFGFIAGIVAAYRGLNPR 212

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
                +G  V   VV +  ++  ++ +    Y  I
Sbjct: 213 GGPKGVGDAVNQSVVITFMLLFFVNMVLTAIYLQI 247


>gi|289641747|ref|ZP_06473905.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
 gi|289508391|gb|EFD29332.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
          Length = 286

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 82/157 (52%)

Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267
           +RE    + A+++AG  G+A+ A++G+ +I EEIDA+  +G+D +R LI PR+ A+ +  
Sbjct: 115 VREFAPWINAMVVAGVMGTAMTADLGARRIREEIDAMEVLGVDPIRTLIVPRVLAITLMT 174

Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327
            LL ++A    ++G  +          + FF  F + AT+ +++  + K       IG+V
Sbjct: 175 GLLDLVALAFGVLGGYMASVWVLGANSSAFFENFFANATVTDVWASVAKTTIFGLLIGVV 234

Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
              +G         +G+ V   VV S + + I + +F
Sbjct: 235 CCYKGLHTQGGPIGVGRAVNQAVVISFAAIWIFNYVF 271


>gi|328880858|emb|CCA54097.1| putative ABC-transporter integral membrane protein [Streptomyces
           venezuelae ATCC 10712]
          Length = 254

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 10/229 (4%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
            ++F+ FL     Q ++V    +    L+S   GAVIA Q      Q GA+ F+     +
Sbjct: 27  PFQFREFL----EQFWFVASVTILPAALVSIPFGAVIALQVGSLTQQLGAQSFTGGASVL 82

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
             +++   L+ A++IAG  GSAI A++GS KI EE+DA+  MG+  V+ L+ PR+ A + 
Sbjct: 83  AVIQQASPLIVALLIAGAGGSAICADLGSRKIREELDAMEVMGVSPVQRLVVPRVLATMA 142

Query: 266 SLPLLTILANFSAIIGA---SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322
              LL  + +    +G    +I++      P A + S F + A L +++   +KA     
Sbjct: 143 VAVLLNGMVSVVGTLGGYFFNIILQG--GTPGA-YLSSFSALAQLPDLYISELKALIFGF 199

Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
             GIVA   G         +G  V   VV +  ++  ++ +    Y  I
Sbjct: 200 IAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFFVNMVLTGIYLQI 248


>gi|120401972|ref|YP_951801.1| hypothetical protein Mvan_0957 [Mycobacterium vanbaalenii PYR-1]
 gi|119954790|gb|ABM11795.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 281

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 101/212 (47%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           IRQ  ++  + V   +L++   G  ++ Q A    Q GA   +     +  +R+   L  
Sbjct: 61  IRQGAFMAGTAVLPTVLVALPIGVTLSIQFALLAGQVGATSLAGAASGLAVIRQAASLTA 120

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A+++A   GSAI A++GS  + EE DA+  MG+  +R L+ PR  A I+    LT +  F
Sbjct: 121 AILMAAAVGSAITADLGSRTMREETDAMEVMGVSVIRRLVVPRFAAAIMIGVALTGVVCF 180

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
              + + +    + +     F + F S AT  ++   L+KA      + +V+ ++G A  
Sbjct: 181 VGFLASYLFNVYFQNGAPGSFVATFASFATTGDMIVALVKAVIFGAIVAVVSCQKGLATQ 240

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
                +   V   VV+SI ++++++   +  Y
Sbjct: 241 GGPTGVANSVNAAVVESILLLMVVNVAISQLY 272


>gi|254462404|ref|ZP_05075820.1| membrane protein [Rhodobacterales bacterium HTCC2083]
 gi|206678993|gb|EDZ43480.1| membrane protein [Rhodobacteraceae bacterium HTCC2083]
          Length = 261

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 9/149 (6%)

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           VG   +PVV L +  TG  +A Q     ++F AE     +++I  +RE+G +L  +MIA 
Sbjct: 53  VGWLSLPVVGLTAVFTGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAA 112

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           R  S+I AEI +MK+ E+IDA+ T+    ++ L  PR+ A +I +P+L  + +   I+G 
Sbjct: 113 RVTSSIAAEIATMKVTEQIDALVTLSTHPMQYLTVPRVLAGLICVPVLVGVGDVIGILGG 172

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIF 311
            +V     +         F+ST  L N F
Sbjct: 173 YLVATGTLE---------FNSTTYLVNTF 192


>gi|116310403|emb|CAH67412.1| OSIGBa0143N19.6 [Oryza sativa Indica Group]
          Length = 345

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/215 (22%), Positives = 106/215 (49%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           +L+ Q+  VG     V +L +   G     Q   + ++ G       ++++   RE+  +
Sbjct: 119 NLLAQLRRVGPGSAGVSLLTAAFVGMAFTIQFVREFTRLGLHRSVGGVLALALSRELSPV 178

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +TAV+ AGR GSA  A++G+M+++E+ D +R +G   V  L+ PR+ A +++LP+LT+++
Sbjct: 179 VTAVVAAGRVGSAFAAKLGTMQVSEQTDTLRVLGAQPVDYLVVPRVVACVLALPVLTLMS 238

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
               +  ++ +    + +  ++            ++ + L+K+      I +V+   G  
Sbjct: 239 FALGLASSAFLADSIFGVSTSIILESARRALRPWDLISSLLKSQVFGAIIAVVSCAWGVT 298

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               +  +G+  T+ VV S+  + + D   +  +F
Sbjct: 299 THGGAKGVGESTTSAVVVSLVGIFVADFALSCLFF 333


>gi|21220886|ref|NP_626665.1| ABC-transporter integral membrane protein [Streptomyces coelicolor
           A3(2)]
 gi|256787958|ref|ZP_05526389.1| ABC-transporter integral membrane protein [Streptomyces lividans
           TK24]
 gi|289771845|ref|ZP_06531223.1| ABC-transporter integral membrane protein [Streptomyces lividans
           TK24]
 gi|8247037|emb|CAB92895.1| putative ABC-transporter integral membrane protein [Streptomyces
           coelicolor A3(2)]
 gi|289702044|gb|EFD69473.1| ABC-transporter integral membrane protein [Streptomyces lividans
           TK24]
          Length = 254

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 109/228 (47%), Gaps = 8/228 (3%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
            ++F+ F    + Q ++V    +    L+S   GAVIA Q      Q GA+ F+     +
Sbjct: 27  PFQFREF----VEQFWFVASVTILPAALVSIPFGAVIALQVGSLTEQLGAQSFTGGASVL 82

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
             +++   L+ A++IAG  GSAI A++GS +I EE+DA+  MG+  V+ L+ PR+ A + 
Sbjct: 83  AVVQQASPLIVALLIAGAGGSAICADLGSRRIREELDAMEVMGVSPVQRLVVPRVLAAMG 142

Query: 266 SLPLLTILANFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323
              LL  L +   I+G     VI +    P A + S F + A L +++   +KA      
Sbjct: 143 VAVLLNGLVSVVGILGGYFFNVIMQ-GGTPGA-YLSSFSALAQLPDLYVSELKALVFGFI 200

Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
            GIVA   G         +G  V   VV +  ++  ++ +    Y  I
Sbjct: 201 AGIVAAYRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMVMTAVYLQI 248


>gi|169628107|ref|YP_001701756.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169240074|emb|CAM61102.1| Putative YrbE family protein [Mycobacterium abscessus]
          Length = 285

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 100/205 (48%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +RQ  +   + V  VIL++   G  ++ Q A    Q GA   +     I  +R+   L+ 
Sbjct: 65  VRQGAFQAGTAVVPVILVTLPIGVTLSIQFALLAGQVGATSLAGAASGIAIIRQAASLVA 124

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++++   GSAI A++GS  + EE DA+  MG+  +R L+ PR  A I+    LT +  F
Sbjct: 125 ALLMSAAVGSAITADLGSRTMREETDAMEVMGVSVIRRLVVPRFAAAIMIGIALTGVVCF 184

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
              +GA +    + +     F + F + AT  ++   LIKA      + +VA ++G +  
Sbjct: 185 VGFLGAYLFNVYWQNGAPGSFVTTFSAFATPGDMILALIKAVIYGAIVAVVACQKGLSTK 244

Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361
                +   V   VV+SI +++ ++
Sbjct: 245 GGPIGVANSVNAAVVESILLLMTVN 269


>gi|302525560|ref|ZP_07277902.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4]
 gi|302434455|gb|EFL06271.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4]
          Length = 267

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 106/202 (52%), Gaps = 6/202 (2%)

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
           L++   GAVIA Q     +Q GA+ F+    ++  +++   L+TA+++AG  GSA+ A+I
Sbjct: 63  LVAIPFGAVIALQLGSLTTQIGAQSFTGAASALAIVQQASPLITALLVAGAGGSAVCADI 122

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA---SIVIWKY 289
           G+ KI EEIDA+  +G++ ++ ++ PR+ A I+   LL  L +   ++G    ++V+   
Sbjct: 123 GARKIREEIDAMEVLGVNPIQRIVVPRVLAAIVVSVLLNGLVSVVGVLGGYFFNVVL--Q 180

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
              P A + + F++ A + +++   IKA       G+VA   G         +G  V   
Sbjct: 181 GGTPGA-YLASFNALAQVPDLWISEIKAFLYGFVAGVVAAFRGLNPAGGPKGVGDAVNQA 239

Query: 350 VVQSISIVIIIDSLFAIFYFAI 371
           VV +  ++ +I+ +    Y  +
Sbjct: 240 VVITFLLLFLINVVLTAVYLKV 261


>gi|254818557|ref|ZP_05223558.1| hypothetical protein MintA_01474 [Mycobacterium intracellulare ATCC
           13950]
          Length = 289

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 99/205 (48%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +RQ  ++  + V   +L++   G  ++ Q A   +Q GA   +     +  +R+   L+ 
Sbjct: 69  VRQGAFMAATAVLPTVLVALPIGVTLSIQFALLANQVGATSLAGAASGLAVIRQAASLVA 128

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV++A   GSAI A++GS  + EE DA+  MG+  +R L+ PR  A I+    LT +  F
Sbjct: 129 AVLMASAVGSAITADLGSRTMREETDAMEVMGVSVIRRLVVPRFAAAIMVGVALTGITCF 188

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
              + + +    +       F + F S AT  ++   L+KA      + ++A ++G    
Sbjct: 189 VGFLASYLFNVYFQRGAPGSFVATFSSFATTEDMIVALLKAVIYGAIVAVIACQKGLFTK 248

Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361
                +   V   VV+SI +++I++
Sbjct: 249 GGPAGVANSVNAAVVESILVLMIVN 273


>gi|254451544|ref|ZP_05064981.1| membrane protein [Octadecabacter antarcticus 238]
 gi|198265950|gb|EDY90220.1| membrane protein [Octadecabacter antarcticus 238]
          Length = 258

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 17/203 (8%)

Query: 156 LIRQMYY----------VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
           L+R  +Y          +G   +PVV L +F TG  +A Q     ++F AE     +++I
Sbjct: 33  LVRPPFYGREFANALLQIGYLSLPVVGLTAFFTGGALALQIYSGGARFNAEAVVPQIVAI 92

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
             +RE+G +L  +MIA R  S+I AEI +MK+ E+IDA+ T+    ++ L  PR+ A  +
Sbjct: 93  GMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQIDALVTLSTHPMKYLTLPRVLAATL 152

Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK-------AP 318
            +P+L  + +   I G  +V  +      A +          ++I + L K       A 
Sbjct: 153 VMPILVGVGDIIGIYGGFLVGTERLGFNAAAYLQNTADFLEPSDIVSSLAKGAVFGFIAA 212

Query: 319 FMACAIGIVAMKEGFAVGVHSNS 341
            M C  G+ + +    VG  + S
Sbjct: 213 LMGCYYGMNSERGAMGVGRATKS 235


>gi|56697513|ref|YP_167881.1| membrane protein [Ruegeria pomeroyi DSS-3]
 gi|56679250|gb|AAV95916.1| membrane protein [Ruegeria pomeroyi DSS-3]
          Length = 260

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 72/125 (57%), Gaps = 10/125 (8%)

Query: 156 LIRQMYY----------VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
           ++R  YY          +G   +PVV L +  TG  +A Q     ++F AE     +++I
Sbjct: 35  ILRPPYYPRELAIALLNIGWLSLPVVGLTAIFTGGALALQIYAGGARFNAEAVVPQIVAI 94

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
             +RE+G +L  +MIA R  S+I AEI +MK+ E+IDA+ T+    ++ L +PR+ A +I
Sbjct: 95  GMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQIDALVTLSTHPMKYLTAPRVLAALI 154

Query: 266 SLPLL 270
           ++PLL
Sbjct: 155 TVPLL 159


>gi|304383590|ref|ZP_07366049.1| ABC superfamily ATP binding cassette transporter permease protein
           [Prevotella marshii DSM 16973]
 gi|304335114|gb|EFM01385.1| ABC superfamily ATP binding cassette transporter permease protein
           [Prevotella marshii DSM 16973]
          Length = 261

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 115/236 (48%), Gaps = 22/236 (9%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G   A   + + FL   + +M  +GV+ + +V+LISF  GAVI  Q    +       F 
Sbjct: 31  GRAVAKPERMRMFLKRYVAEMSALGVNSIGIVLLISFFIGAVICIQMKLNIQSPWMPRFV 90

Query: 200 IDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
               +    REI +L     +  +++AG+ GS I +E+G+M++ ++IDA+  MG++    
Sbjct: 91  TGYTT----REIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALDIMGVNSACY 146

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN----- 309
           LI P+I  ++  +P L I+++ + I+GA      Y         S    T  L +     
Sbjct: 147 LILPKIIGMVTIMPFLVIISSATGILGA------YATSYIGHVLSPEDLTIGLQHQFNPW 200

Query: 310 -IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            ++  +IK+ F A  I  V+   G+ V   S  +GK  T  VV S S++I+   +F
Sbjct: 201 FVWMSIIKSLFFAFIISSVSSYFGYTVQGGSVEVGKASTDAVVSS-SVLILFSDVF 255


>gi|254773146|ref|ZP_05214662.1| hypothetical protein MaviaA2_00471 [Mycobacterium avium subsp.
           avium ATCC 25291]
          Length = 289

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 99/205 (48%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +RQ  ++  + V   +L++   G  ++ Q A   +Q GA   +     +  +R+   L+ 
Sbjct: 69  VRQGAFMAATAVLPTVLVALPIGVTLSIQFALLANQVGATSLAGAASGLAVIRQAASLVA 128

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV++A   GSAI A++GS  + EE DA+  MG+  +R L+ PR  A I+    LT +  F
Sbjct: 129 AVLMASAVGSAITADLGSRTMREETDAMEVMGVSVIRRLVVPRFAAAIMVGVALTGITCF 188

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
              + + +    +       F + F S AT  ++   L+KA      + ++A ++G    
Sbjct: 189 VGFLASYLFNVYFQRGAPGSFVATFSSFATTEDMIVALLKAVIYGAIVAVIACQKGLFTK 248

Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361
                +   V   VV+SI +++I++
Sbjct: 249 GGPAGVANSVNAAVVESILVLMIVN 273


>gi|254464755|ref|ZP_05078166.1| membrane protein [Rhodobacterales bacterium Y4I]
 gi|206685663|gb|EDZ46145.1| membrane protein [Rhodobacterales bacterium Y4I]
          Length = 260

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 73/125 (58%), Gaps = 10/125 (8%)

Query: 156 LIRQMYY----------VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
           ++R  YY          +G   +PVV L +  TG  +A Q     ++F AE     +++I
Sbjct: 35  MLRPPYYPREVLNSLLNIGWLSLPVVGLTAIFTGGALALQIYAGGARFNAEAVVPQIVAI 94

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
             +RE+G +L  +MIA R  S+I AEI +MK+ E+IDA+ T+    ++ L++PR+ A +I
Sbjct: 95  GMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQIDALVTLSTHPMKYLVAPRVLAALI 154

Query: 266 SLPLL 270
           ++P+L
Sbjct: 155 TVPVL 159


>gi|281425287|ref|ZP_06256200.1| hypothetical protein HMPREF0971_02259 [Prevotella oris F0302]
 gi|299141487|ref|ZP_07034623.1| ABC transporter, permease [Prevotella oris C735]
 gi|281400580|gb|EFB31411.1| ABC transporter, permease [Prevotella oris F0302]
 gi|298576823|gb|EFI48693.1| ABC transporter, permease [Prevotella oris C735]
          Length = 252

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 112/227 (49%), Gaps = 4/227 (1%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIF 198
           G   A   + + F    +++M  +GV  + +V+LISF  GAVI  Q    + S +     
Sbjct: 22  GRSIAVPERMRMFFKRYVKEMSQLGVDSIGIVLLISFFIGAVICIQMKVNIQSPWMPRWV 81

Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258
           S      + L E    +  +++AG+ GS I +E+G+M++ ++IDA+  MG++    LI P
Sbjct: 82  SGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALDIMGVNSANYLILP 141

Query: 259 RIWALIISLPLLTILANFSAIIGA-SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
           +I  L+  +P L + ++   I+GA S     +   P  +     HS      I+  +IK+
Sbjct: 142 KILGLVTMMPFLVVFSSALGILGAYSTAYIGHMLSPDDLTLGIQHSFNAWF-IWMSIIKS 200

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            F A  I  V+   G+ V   S  +GK  T  VV S S++I+   +F
Sbjct: 201 MFFAFVIASVSSFFGYTVEGGSVEVGKASTDAVVSS-SVLILFSDVF 246


>gi|254797049|ref|YP_003081887.1| ABC transporter permease protein [Neorickettsia risticii str.
           Illinois]
 gi|254590296|gb|ACT69658.1| ABC transporter permease protein [Neorickettsia risticii str.
           Illinois]
          Length = 250

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 115/221 (52%), Gaps = 2/221 (0%)

Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209
           K + L +I+Q++ +G   +P+V   +   GA++A      L  F ++     +++    R
Sbjct: 28  KMYFLEIIKQLFLIGYYSMPIVAFSAVFMGAMLALHTYTGLDLFQSQTMVAQILAKSITR 87

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
           EIG ++  +++AGR  S I AEIG+M++ E++D +R++ ++    L+ P+I A +IS P+
Sbjct: 88  EIGPVVVGIVVAGRVASTIAAEIGTMRVTEQVDLLRSLSINVHAYLVLPKIIAALISFPV 147

Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329
           L I++    ++G  ++    +     ++ S   +  T A++ +G+ KA F       V+ 
Sbjct: 148 LEIISALFGMLGGYLIGTYKFAFSKMLYISDTLTFITYADLMSGMTKAFFFGFITASVSC 207

Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL--FAIFY 368
                    +  +G  VT  VV S  ++++ + L   AIF+
Sbjct: 208 FNALRATHGAKGVGIAVTNSVVASFVLILLSNYLITLAIFH 248


>gi|54024947|ref|YP_119189.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54016455|dbj|BAD57825.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 287

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 100/196 (51%), Gaps = 5/196 (2%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           ++++  ++  VS +P  ILIS   G VIA Q        GA   +  +  +  +++I  L
Sbjct: 66  AVVQAWFFASVSLLPA-ILISLPMGVVIAVQVGSLTENVGAGSMAGAVGGMGVMQQIAPL 124

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
             A+++ G   SAI +++G+  I EEIDA+RTMG+D  R L++PR+ A+ +  P+L +L 
Sbjct: 125 AAALLVGGAGASAIASDLGARTIREEIDALRTMGIDPHRRLVAPRVVAMTVVAPMLAVLV 184

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
              +I+ + +V      +    ++  F S A++ ++   L K+      + ++A + G  
Sbjct: 185 ILMSILASFLVASVGQGVAPGSYWLSFGSFASVTDLVICLGKSAVFGYLVAVIASQRGL- 243

Query: 335 VGVHSNSLGKKVTTCV 350
               +    K V  CV
Sbjct: 244 ---QAQGGPKGVADCV 256


>gi|256420257|ref|YP_003120910.1| hypothetical protein Cpin_1211 [Chitinophaga pinensis DSM 2588]
 gi|256035165|gb|ACU58709.1| protein of unknown function DUF140 [Chitinophaga pinensis DSM 2588]
          Length = 247

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 5/217 (2%)

Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ---L 208
           F    +RQ   +G+  + +V++IS   G V   Q A+QL      I    +  I++   +
Sbjct: 29  FWKEFMRQCVDIGIGSLGIVLIISMFMGGVTTLQIAYQL--ISPVIPKSTIAQIVRDTII 86

Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268
            E    LT +++AG  GS I +E+G+M+++E+IDA   MG++    LI P+I A II +P
Sbjct: 87  LEFAPTLTCIVLAGVVGSKIASELGNMRVSEQIDAQEIMGINTKGYLIMPKILAAIIMIP 146

Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328
            L  +A F  I G          +    ++          NIF  L KA   A  I  V 
Sbjct: 147 CLIAIAGFLGIWGGQKAGELGGILSAEQYWQGLRQDFRAYNIFFALFKAFVFAFIIASVP 206

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
              G+ V   +  +GK  T+ VV +  +++ +D L A
Sbjct: 207 SYYGYNVQGGALEIGKASTSAVVVTCVLILFMDYLLA 243


>gi|134098920|ref|YP_001104581.1| putative ABC-transporter integral membrane protein
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133911543|emb|CAM01656.1| putative ABC-transporter integral membrane protein
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 243

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 108/224 (48%), Gaps = 4/224 (1%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
            ++F+ F    ++Q +++    +   IL+S   GAVI+ Q     +Q GA+ F+     +
Sbjct: 16  PFQFREF----VQQFWFIASVSITPAILVSIPFGAVISLQLGTLTAQIGAKSFNGAASVL 71

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
             +++   ++T ++IAG  GSAI A++GS  I EEI A+  +G+  V+ LI PR+ A ++
Sbjct: 72  AVVQQASPIVTTLVIAGAGGSAICADLGSRTIREEIAAMEVLGVSPVQRLIVPRVLAAVL 131

Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325
           +  LL  L +   + G         D     + + F++ A L +++    KA       G
Sbjct: 132 TAMLLNGLVSVVGVAGGYFFNVIVQDGTPGAYLASFNALAQLPDLWVSTFKALIFGFLAG 191

Query: 326 IVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           +VA   G      S  +G  V   VV +  ++  ++++    Y 
Sbjct: 192 VVAAYRGLNPRGGSKGVGDVVNQSVVITFLLLFFVNTVITALYL 235


>gi|188995184|ref|YP_001929436.1| hypothetical protein PGN_1320 [Porphyromonas gingivalis ATCC 33277]
 gi|188594864|dbj|BAG33839.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
           33277]
          Length = 217

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 101/184 (54%), Gaps = 9/184 (4%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL- 214
           LI+++  +GV  V +VI+ISF  GAVI  Q +  ++      F+I   +    REI +L 
Sbjct: 33  LIKEIDKLGVDSVWIVIIISFFIGAVITIQLSLNMTSPLIPRFTIGYST----REIILLE 88

Query: 215 ----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
               +  +++AG+ GS+I +E+G+M++ E+IDA+  +G++    LI P+I   ++ +P+L
Sbjct: 89  FSSTVMCLILAGKVGSSIASELGTMRVTEQIDAMEVIGVNSANYLILPKIIGFMLFVPVL 148

Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330
           +I++  + I+G  +      ++P + F        +  N+F  +IK+   A  I  VA  
Sbjct: 149 SIISMSTGIVGGYLACSLVPNLPRSDFEYGLQLFFSPYNVFYSIIKSVAYAFIISSVAGY 208

Query: 331 EGFA 334
            G+ 
Sbjct: 209 YGYT 212


>gi|317504956|ref|ZP_07962905.1| ABC superfamily ATP binding cassette transporter permease protein
           [Prevotella salivae DSM 15606]
 gi|315663948|gb|EFV03666.1| ABC superfamily ATP binding cassette transporter permease protein
           [Prevotella salivae DSM 15606]
          Length = 252

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 110/219 (50%), Gaps = 4/219 (1%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSIL 206
           + + F     ++M  +GV  + +V+LISF  GAVI  Q    + S +     S      +
Sbjct: 30  RMRMFFKRYTKEMSQLGVDSIGIVLLISFFIGAVICIQMKVNIQSPWMPRWVSGYTTREI 89

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            L E    +  +++AG+ GS I +E+G+M++ ++IDA+  MG++    LI P+I  L+  
Sbjct: 90  MLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALDIMGVNSANYLILPKILGLVTM 149

Query: 267 LPLLTILANFSAIIGA-SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325
           +P L I ++   I+GA S     +   P  +     HS  +   I+  ++K+ F A  I 
Sbjct: 150 MPFLVIFSSALGILGAYSTAYIGHLLTPDDLTLGIQHSFNSWF-IWMSILKSMFFAFIIA 208

Query: 326 IVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            V+   G+ V   S  +GK  T  VV S S++I+   +F
Sbjct: 209 SVSSYFGYTVEGGSVEVGKASTDAVVSS-SVLILFSDVF 246


>gi|114564855|ref|YP_752369.1| hypothetical protein Sfri_3703 [Shewanella frigidimarina NCIMB 400]
 gi|114336148|gb|ABI73530.1| protein of unknown function DUF140 [Shewanella frigidimarina NCIMB
           400]
          Length = 264

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 75/120 (62%), Gaps = 8/120 (6%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM----SILQLREI 211
           +I+Q+Y++G   + V+I+ +  TG V+A Q    L +FG    S+DL+    ++  ++E+
Sbjct: 46  VIKQIYFIGNRSLIVIIVAALFTGMVVALQFYDTLVRFG----SVDLLGSAVALSLIKEL 101

Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271
           G ++TA+M+  R GSA  +EIG M+  ++ DA+  M ++  R ++ PR+ A +  +P+LT
Sbjct: 102 GPVMTALMVIARVGSATCSEIGIMRNEQQFDALDCMAINSYRYVMLPRLLAALFCVPMLT 161


>gi|118619035|ref|YP_907367.1| YrbE family protein, YrbE5A [Mycobacterium ulcerans Agy99]
 gi|118571145|gb|ABL05896.1| YrbE family protein, YrbE5A [Mycobacterium ulcerans Agy99]
          Length = 289

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 98/205 (47%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +RQ  ++  + V   IL+S      ++ Q A    Q GA   +     +  +R+   L+ 
Sbjct: 69  VRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGATSLAGAASGLAVIRQGASLVA 128

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV++A   GSAI A++GS  + EE DA+  MGL  +R L+ PR  A I+    LT +  F
Sbjct: 129 AVLMASAVGSAITADLGSRTMREETDAMEVMGLSVIRRLVVPRFAAAIMIGVALTGVVCF 188

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
                + +    + +     F + F S AT  ++F  L KA      + +V+ ++G +  
Sbjct: 189 VGFFASYMFNVYFQNGAPGSFVATFASFATTDDMFLALFKAVMFGAIVAVVSAQKGLSTK 248

Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361
                +   V   VV+SI +++I++
Sbjct: 249 GGPTGVANSVNAAVVESILVLMIVN 273


>gi|324997538|ref|ZP_08118650.1| hypothetical protein PseP1_02178 [Pseudonocardia sp. P1]
          Length = 246

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 77/144 (53%), Gaps = 1/144 (0%)

Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267
           +RE    + A+++AG  G+A+ A++G+ +I EEIDA+  +G+D VR LI PRI A+ I  
Sbjct: 76  VREFAPWINAMVVAGVVGTAMTADLGARRIREEIDAMEVLGIDPVRALILPRIIAVTIMT 135

Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327
            L+ ++A    ++G  +   +  D   A F   F S AT  +++  ++K       IG+V
Sbjct: 136 GLMDLIALSFGVLGGYLAAIQ-LDAGSAAFQQNFFSNATTIDLWGSVLKTTLFGLIIGVV 194

Query: 328 AMKEGFAVGVHSNSLGKKVTTCVV 351
              +GF        +G+ V   VV
Sbjct: 195 CCYKGFRAQGGPAGVGRAVNQAVV 218


>gi|326775351|ref|ZP_08234616.1| protein of unknown function DUF140 [Streptomyces cf. griseus
           XylebKG-1]
 gi|326655684|gb|EGE40530.1| protein of unknown function DUF140 [Streptomyces cf. griseus
           XylebKG-1]
          Length = 290

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 100/215 (46%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I Q ++V    +    L+S   GAVIA Q      Q GA+ F+     +  +++   ++ 
Sbjct: 70  IEQFWFVASVTILPAALVSIPFGAVIALQVGSLTQQLGAQSFTGGASVLAVIQQASPIIV 129

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++I+G +GSAI A++GS KI EE+DA+  MG+  ++ L+ PR+ A ++   LL  L + 
Sbjct: 130 ALLISGAAGSAICADLGSRKIREELDAMEVMGVSPIQRLVVPRVLATMLVAVLLNGLISV 189

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
              +G         D     + + F + A L +++    KA       GIVA   G    
Sbjct: 190 VGTLGGYFFNVIMQDGTPGAYLASFSALAQLPDLYISEFKALIFGFIAGIVAAYRGLNPR 249

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
                +G  V   VV +  ++  ++ +    Y  I
Sbjct: 250 GGPKGVGDAVNQSVVITFMLLFFVNMVLTAIYLQI 284


>gi|311744213|ref|ZP_07718017.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Aeromicrobium marinum DSM 15272]
 gi|311312386|gb|EFQ82299.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Aeromicrobium marinum DSM 15272]
          Length = 257

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 109/216 (50%), Gaps = 2/216 (0%)

Query: 157 IRQMYYV-GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           + Q +++  V+ VP  IL+S   GA+IA Q      Q GA+ F+     +  +RE   + 
Sbjct: 37  VEQAWFITSVTLVPT-ILVSIPFGAIIALQVGSLTGQLGAQSFAGATAVLATVREAAPIA 95

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++IAG +GSAI +++G+ KI EEIDA+  +G+D +  L+ PR  A +    L+  +  
Sbjct: 96  AALVIAGAAGSAICSDLGARKIREEIDAMEVLGIDPLARLVVPRALATVAVALLINGIVI 155

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
            + I G               F S F + ATL +++  ++KA        IVA  +G   
Sbjct: 156 TAGIAGGYFFTVVVQGGSAGAFLSSFAALATLPDVYVAMVKAAVFGFLTAIVAANKGLTA 215

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           G   + +G+ V   V+ +  ++ +++++    YF I
Sbjct: 216 GGGPSGVGRAVNEAVILAFMLLFLLNAIITALYFQI 251


>gi|182434833|ref|YP_001822552.1| putative YrbE family protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178463349|dbj|BAG17869.1| putative YrbE family protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 290

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 100/215 (46%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I Q ++V    +    L+S   GAVIA Q      Q GA+ F+     +  +++   ++ 
Sbjct: 70  IEQFWFVASVTILPAALVSIPFGAVIALQVGSLTQQLGAQSFTGGASVLAVIQQASPIIV 129

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++I+G +GSAI A++GS KI EE+DA+  MG+  ++ L+ PR+ A ++   LL  L + 
Sbjct: 130 ALLISGAAGSAICADLGSRKIREELDAMEVMGVSPIQRLVVPRVLATMLVAVLLNGLISV 189

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
              +G         D     + + F + A L +++    KA       GIVA   G    
Sbjct: 190 VGTLGGYFFNVIMQDGTPGAYLASFSALAQLPDLYISEFKALIFGFIAGIVAAYRGLNPR 249

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
                +G  V   VV +  ++  ++ +    Y  I
Sbjct: 250 GGPKGVGDAVNQSVVITFMLLFFVNMVLTAIYLQI 284


>gi|325104961|ref|YP_004274615.1| protein of unknown function DUF140 [Pedobacter saltans DSM 12145]
 gi|324973809|gb|ADY52793.1| protein of unknown function DUF140 [Pedobacter saltans DSM 12145]
          Length = 244

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 81/136 (59%), Gaps = 1/136 (0%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSIL 206
           KF  +   + ++M Y+G+  + ++ +IS   GAV+  Q AFQL S F  +     +    
Sbjct: 22  KFSLYWKEIAKEMVYIGIGSLALISIISVFVGAVMTLQIAFQLVSDFIPKTIVGSVNRDS 81

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            + E+   + A+++AG+ GS+I +EIG+M++ E+IDA+  MG++    LI P+I A I  
Sbjct: 82  AILELSPTICALVLAGKIGSSISSEIGTMRVTEQIDALEIMGINAPGYLILPKIIAGITM 141

Query: 267 LPLLTILANFSAIIGA 282
           +P+L  ++ F A++G 
Sbjct: 142 IPILVYISIFLALLGG 157


>gi|84494808|ref|ZP_00993927.1| putative ABC transporter integral membrane protein [Janibacter sp.
           HTCC2649]
 gi|84384301|gb|EAQ00181.1| putative ABC transporter integral membrane protein [Janibacter sp.
           HTCC2649]
          Length = 276

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 94/199 (47%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V+  ++F TG+ +  QG   L+Q G   F+  L + L  REI  L+  + +A   G  
Sbjct: 65  VGVLTFMAFFTGSQVGLQGYSSLNQLGTGAFAGFLAAYLNTREIAPLVAGLSLAATVGCG 124

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
             A++G+M+I+EE+DA+  MG+  +  L++ R+ A  I++  L ++   S+      ++ 
Sbjct: 125 FTAQLGAMRISEEVDALEVMGIPSLPFLVTTRMIAGFIAVIPLYVIGLLSSYAATRFIVT 184

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
            Y+      +   FH      +IF   +K    A  I ++    G+        +G  V 
Sbjct: 185 DYFGQSKGTYDHYFHLFLPPIDIFYSFLKVLVFAVIIILIHCYYGYTASGGPAGVGVAVG 244

Query: 348 TCVVQSISIVIIIDSLFAI 366
             V  SI  V ++D  F++
Sbjct: 245 KAVRTSIVAVNLVDFFFSL 263


>gi|288924563|ref|ZP_06418500.1| ABC transporter, permease [Prevotella buccae D17]
 gi|315607425|ref|ZP_07882421.1| ABC superfamily ATP binding cassette transporter permease protein
           [Prevotella buccae ATCC 33574]
 gi|288338350|gb|EFC76699.1| ABC transporter, permease [Prevotella buccae D17]
 gi|315250857|gb|EFU30850.1| ABC superfamily ATP binding cassette transporter permease protein
           [Prevotella buccae ATCC 33574]
          Length = 248

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 112/219 (51%), Gaps = 4/219 (1%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSIL 206
           + + F+   +++M  +GV  + +V+LISF  GAVI  Q    + S +     S      +
Sbjct: 26  RMRMFMKRYVKEMSQLGVDSIGIVLLISFFIGAVICIQMKLNIQSPWMPRWVSGYTTREI 85

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            L E    +  +++AG+ GS I +E+G+M++ ++IDA+  MG++    LI P+I  L+  
Sbjct: 86  MLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALDIMGVNSAGYLILPKILGLVTI 145

Query: 267 LPLLTILANFSAIIGASIVIWKYYDI-PFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325
           +P L I ++   IIGA    +  + + P  +     HS      ++  +IK+ F A  I 
Sbjct: 146 MPFLVIFSSAMGIIGAYATAYVGHILSPDDLTLGLQHSFNAWF-VWMSIIKSLFFAFIIA 204

Query: 326 IVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            V+   G+ V   S  +G+  T  VV S S++I+   +F
Sbjct: 205 SVSSYFGYTVEGGSVEVGESSTDAVVCS-SVLILFSDVF 242


>gi|163732016|ref|ZP_02139462.1| hypothetical protein RLO149_01157 [Roseobacter litoralis Och 149]
 gi|161394314|gb|EDQ18637.1| hypothetical protein RLO149_01157 [Roseobacter litoralis Och 149]
          Length = 256

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 68/114 (59%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + Q+  +G   +PVV L +  TG  +A Q     S+F AE     ++++  +RE+G +L 
Sbjct: 42  VTQLVNIGWLSLPVVGLTALFTGGALALQIYAGGSRFNAESVVPQIVAVGMVRELGPVLV 101

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
            +MIA R  S+I AEI +MK+ E+IDA+ T+    ++ L  PR+ A ++ +PLL
Sbjct: 102 GLMIAARVTSSIAAEIATMKVTEQIDALVTLSTHPMKYLTVPRVLAAVLVVPLL 155


>gi|41406190|ref|NP_959026.1| hypothetical protein MAP0092 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41394538|gb|AAS02409.1| hypothetical protein MAP_0092 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 289

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 98/205 (47%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +RQ  ++  + V   +L++   G  ++ Q A   +Q GA   +     +  +R+   L+ 
Sbjct: 69  VRQGAFMAATAVLPTVLVALPIGVTLSIQFALLANQVGATSLAGAASGLAVIRQAASLVA 128

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV+ A   GSAI A++GS  + EE DA+  MG+  +R L+ PR  A I+    LT +  F
Sbjct: 129 AVLTASAVGSAITADLGSRTMREETDAMEVMGVSVIRRLVVPRFAAAIMVGVALTGITCF 188

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
              + + +    +       F + F S AT  ++   L+KA      + ++A ++G    
Sbjct: 189 VGFLASYLFNVYFQRGAPGSFVATFSSFATTEDMIVALLKAVIYGAIVAVIACQKGLFTK 248

Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361
                +   V   VV+SI +++I++
Sbjct: 249 GGPAGVANSVNAAVVESILVLMIVN 273


>gi|239982859|ref|ZP_04705383.1| ABC-transporter integral membrane protein [Streptomyces albus
           J1074]
 gi|291454702|ref|ZP_06594092.1| ABC-transporter integral membrane protein [Streptomyces albus
           J1074]
 gi|291357651|gb|EFE84553.1| ABC-transporter integral membrane protein [Streptomyces albus
           J1074]
          Length = 254

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 109/229 (47%), Gaps = 10/229 (4%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
            ++F+ F    + Q +++    +    L+S   GAVIA Q      Q GA+ F+     +
Sbjct: 27  PFQFREF----VEQFWFIASVTILPAALVSIPFGAVIALQVGSLTQQLGAQSFTGGASVL 82

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
             +++   L+ A++IAG  GSAI A++GS KI EE+DA+  MG+  V+ L+ PR+ A + 
Sbjct: 83  AVIQQASPLIVALLIAGAGGSAICADLGSRKIREELDAMEVMGVSPVQRLVVPRVLATMS 142

Query: 266 SLPLLTILANFSAIIGA---SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322
              LL  + +    +G    +I++      P A + S F + A L +++   +KA     
Sbjct: 143 VAVLLNGMVSVVGTLGGYFFNIILQG--GTPGA-YLSSFSALAQLPDLYISELKALIFGF 199

Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
             GIVA   G         +G  V   VV +  ++  ++ +    Y  I
Sbjct: 200 IAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFFVNMVMTGLYLQI 248


>gi|119386398|ref|YP_917453.1| hypothetical protein Pden_3690 [Paracoccus denitrificans PD1222]
 gi|119376993|gb|ABL71757.1| protein of unknown function DUF140 [Paracoccus denitrificans
           PD1222]
          Length = 252

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 90/162 (55%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L RQ+  +G   +PVV L +  TGA +A Q      +F A      +++I   RE+G +L
Sbjct: 39  LARQVVQIGWLSLPVVGLTALFTGAALALQIHSGGERFQAGDVVPAIVAIGMARELGPVL 98

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
             +M+A R  SAI AE+G+M++ E+IDA+ T+  D V  L+SPR+WA ++ +P+L  + +
Sbjct: 99  GGLMVAARVASAIAAELGTMRVTEQIDALVTLSTDPVGWLVSPRLWAALLCVPMLVGVGD 158

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
              I+G  ++         A++ S   +     ++ +GL+K 
Sbjct: 159 VIGIMGGWLIGVNALGFNSAIYLSNSWAYLESWDVVSGLLKG 200


>gi|260910011|ref|ZP_05916695.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Prevotella sp. oral taxon 472 str. F0295]
 gi|260635870|gb|EEX53876.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Prevotella sp. oral taxon 472 str. F0295]
          Length = 248

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 110/219 (50%), Gaps = 4/219 (1%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSIL 206
           + + F    +++M  +GV  V +V+LISF  GAVI  Q    + S +     S      +
Sbjct: 26  RMRMFFKRYVKEMSQLGVDSVGIVLLISFFIGAVICIQMKLNIQSPWMPRWVSGYTTREI 85

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            L E    +  +++AG+ GS I +E+G+M++ ++IDA+  MG++    LI P++  L+  
Sbjct: 86  MLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALDIMGVNSASYLILPKVLGLVTI 145

Query: 267 LPLLTILANFSAIIGASIVIW-KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325
           +P L I ++   I+GA    +  +   P  +     HS      ++  ++K+ F A  I 
Sbjct: 146 MPFLVIFSSAMGILGAYATAYIGHILTPDDLTLGIQHSFNPWF-MWMSIVKSLFFAYIIA 204

Query: 326 IVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            V+   G+ V   S  +GK  T  VV S S++I+   +F
Sbjct: 205 SVSSYFGYTVEGGSVEVGKASTDAVVSS-SVLILFSDVF 242


>gi|84502659|ref|ZP_01000778.1| membrane protein [Oceanicola batsensis HTCC2597]
 gi|84389054|gb|EAQ01852.1| membrane protein [Oceanicola batsensis HTCC2597]
          Length = 258

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 7/195 (3%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +PVV L +  TG  +A Q     S+F AE     +++I  +RE+G +L  +MIA R  S+
Sbjct: 55  LPVVGLTAVFTGGALALQIYAGGSRFDAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSS 114

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I AEI +MK+ E+IDA+ T+    ++ L  PR+ A ++++PLL  + +   I G   V  
Sbjct: 115 IAAEIATMKVTEQIDALVTLSTHPMKYLTVPRVLAGLVTVPLLVGVGDIIGIFGGYQVAV 174

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV- 346
           +      A +           ++ + L+K      A G++A   G   G++S    + V 
Sbjct: 175 RSLGFNPATYLQNTVDFLEPLDVLSSLVK----GAAFGVIATLMGCYSGMNSGRGAQGVG 230

Query: 347 --TTCVVQSISIVII 359
             T   V++ S++I+
Sbjct: 231 AATKSSVEAASVLIL 245


>gi|288930100|ref|ZP_06423938.1| ABC transporter, permease [Prevotella sp. oral taxon 317 str.
           F0108]
 gi|288328573|gb|EFC67166.1| ABC transporter, permease [Prevotella sp. oral taxon 317 str.
           F0108]
          Length = 248

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 110/237 (46%), Gaps = 40/237 (16%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSIL 206
           + + F    +++M  +GV  V +V+LISF  GAVI  Q    + S +     S      +
Sbjct: 26  RMRMFFKRYVKEMSQLGVDSVGIVLLISFFIGAVICIQMKLNIQSPWMPRWVSGYTTREI 85

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            L E    +  +++AG+ GS I +E+G+M++ ++IDA+  MG++    LI P+I  L+  
Sbjct: 86  MLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALDIMGVNSASYLILPKILGLVTI 145

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT-------------- 312
           +P L I ++   I+GA                   ++TA + +I T              
Sbjct: 146 MPFLVIFSSAMGILGA-------------------YATAYIGHILTPDDLTLGIQHAFKP 186

Query: 313 -----GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
                 ++K+ F A  I  V+   G+ V   S  +GK  T  VV S S++I+   +F
Sbjct: 187 WFMWMSIVKSLFFAYIIASVSSYFGYTVEGGSVEVGKASTDAVVSS-SVLILFSDVF 242


>gi|325281943|ref|YP_004254485.1| hypothetical protein Odosp_3346 [Odoribacter splanchnicus DSM
           20712]
 gi|324313752|gb|ADY34305.1| protein of unknown function DUF140 [Odoribacter splanchnicus DSM
           20712]
          Length = 245

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 104/202 (51%), Gaps = 2/202 (0%)

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIA 221
           +G++ + +V++ISF  GAV+  Q A+ +       + I  ++    L E    + ++++A
Sbjct: 38  LGLNSIVLVVIISFFIGAVLTLQTAYNMQSPLLPRYLIGYLTRETMLLEFSSTIVSLILA 97

Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281
           G+ GS I +EIGSM+I E+I+A+ TMG++ V  L+ P+I A ++  P+L I + F  I+G
Sbjct: 98  GKIGSNIASEIGSMRITEQIEALETMGVNSVSYLVGPKILASLVINPILYIFSVFIGILG 157

Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341
             I       + F  F    H +     +   ++K  F A     +    G+ V   +  
Sbjct: 158 GIISGLISGVVNFEDFVYGLHFSFNPYYVTYSIVKTLFFAFIFTSIPAFYGYYVQGGARE 217

Query: 342 LGKKVTTCVVQSISIVIIIDSL 363
           +GK  T  VV S SI I+  +L
Sbjct: 218 VGKAGTKAVVDS-SIAILTANL 238


>gi|294632699|ref|ZP_06711258.1| YrbE family protein [Streptomyces sp. e14]
 gi|292830480|gb|EFF88830.1| YrbE family protein [Streptomyces sp. e14]
          Length = 254

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 88/180 (48%), Gaps = 2/180 (1%)

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
           L+S   GAVIA Q      Q GA+ F+     +  +++   L+ A++I+G  GSAI A++
Sbjct: 50  LVSIPFGAVIALQVGSLTQQLGAQSFTGGASVLAVVQQASPLIVALLISGAGGSAICADL 109

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV-IWKYYD 291
           GS  I EE+DA+  MG+  V+ L+ PR+ A +    LL  L +   I+G     ++  + 
Sbjct: 110 GSRTIREELDAMEVMGVSPVQRLVVPRVLAAMGVAVLLNGLVSVVGILGGYFFNVYLQHG 169

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
            P A + S F S A L +++    KA       GIVA   G         +G  V   VV
Sbjct: 170 TPGA-YVSSFSSLAQLPDLYVSEFKALVFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVV 228


>gi|282897686|ref|ZP_06305685.1| Protein of unknown function DUF140 [Raphidiopsis brookii D9]
 gi|281197365|gb|EFA72262.1| Protein of unknown function DUF140 [Raphidiopsis brookii D9]
          Length = 241

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 101/211 (47%)

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           VG   +  V+L+S   G +   Q A +L +FGA        ++   RE+  LLTA +IAG
Sbjct: 31  VGPGSLSPVLLVSGFAGMIFTIQTARELVRFGAVDNLGGAFAVAFCRELAPLLTASVIAG 90

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           ++GSA  AEIG+M++ E+IDA+  +  D +  L+ PR+ A  + +P++ I A    + G 
Sbjct: 91  QAGSAFAAEIGAMQVTEQIDALYLLKTDPIDYLVLPRVIACGLMMPVMMIFALIIGVSGG 150

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
                ++Y I    F        T  ++   +IK       + +     G      +  +
Sbjct: 151 IFAGLEFYQIQPENFLESVRDFLTPGDMMMIIIKGVIFGIIVAVNGCSWGLTTRGGAKEV 210

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           G+  TT VV +  ++ I D L A+    +GI
Sbjct: 211 GESATTAVVTTWVVLFITDFLLALPGITVGI 241


>gi|296138972|ref|YP_003646215.1| hypothetical protein Tpau_1245 [Tsukamurella paurometabola DSM
           20162]
 gi|296027106|gb|ADG77876.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM
           20162]
          Length = 287

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 2/205 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           R    VG    PV+ ++    GA++A QG   L+  G    +    S    RE   LL  
Sbjct: 66  RGALVVGGGTAPVLAVLGITVGAIVAVQGFAILNMLGMGPLTAVAASFANTREFAPLLAG 125

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPLLTILANF 276
           V  A ++G  + AEIG+M+INEEIDA+ ++GL  V  +++ R+ A LI  +P+  I    
Sbjct: 126 VGFAAQAGCRMTAEIGAMRINEEIDALESLGLRSVSFVVTTRVLAGLIAVIPVYLITLIL 185

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           S +  A +V    Y +P   +   F    + ++I   +IK      A+ I+   +GF   
Sbjct: 186 SWLSCAWMVT-SVYGMPTGTYQHYFSQFVSASDIIFSVIKVAVFLVAVIIIHCYQGFFAS 244

Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361
                +G      +  S+  V+I++
Sbjct: 245 GGPEGVGTASGRAIRASLVAVVILN 269


>gi|261415551|ref|YP_003249234.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261372007|gb|ACX74752.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 292

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 89/163 (54%), Gaps = 7/163 (4%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             ++ L +         S+ FK    ++I Q ++ GV   P +  ++ + G V+     +
Sbjct: 32  GQLIALFLRTVASLFDKSHNFKSDSRNIILQTFFTGVEIFPPLFAVATLFGTVVI---IY 88

Query: 189 QLSQFGAEIFSID---LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
             S  G   FS +   L+ ++ +RE+  + TA +IAGR+GS++   IGSM IN E+DA+ 
Sbjct: 89  LFSLMGKMGFSNNIGFLIVVIIIRELSPIFTAFLIAGRTGSSLTTYIGSMVINSEVDALA 148

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
           TMG++ +R L+ P +    I++ ++ I+ + SA IGA  ++ K
Sbjct: 149 TMGINPIRYLVMPSVIGGTIAMIIMNIIFSTSA-IGAGFLLTK 190


>gi|332107650|gb|EGJ08874.1| hypothetical protein RBXJA2T_01025 [Rubrivivax benzoatilyticus JA2]
          Length = 260

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 110/217 (50%), Gaps = 3/217 (1%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214
           ++ Q++ +G   + +++      G V+A Q  + L  +GA   S+ L+  L L RE+G +
Sbjct: 43  VVAQIHAIGNRSLVIILASGMAVGFVLALQMYYALVTYGAA-ESLGLVVNLSLVRELGPV 101

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           + A++ AGR+G+++ AEIG MK  E++ A+  M +D    +++PR    IIS+PLL  L 
Sbjct: 102 VAALLFAGRAGTSLTAEIGLMKAGEQLAAMELMAIDPRSRVLAPRFLGGIISMPLLAALF 161

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGF 333
           +   I+GA +V      +    F+S   S+  +  ++  G++K+         VA+ +G+
Sbjct: 162 SAIGILGAWVVAVLLIGVDAGNFWSIMQSSVDVWRDVGNGIVKSFVFGVICTAVALYQGY 221

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                   +    T  VV +   V+ +D L     F+
Sbjct: 222 ETQATPEGVAHATTRTVVIASLAVLAMDFLLTALMFS 258


>gi|294672817|ref|YP_003573433.1| hypothetical protein PRU_0026 [Prevotella ruminicola 23]
 gi|294473166|gb|ADE82555.1| putative membrane protein [Prevotella ruminicola 23]
          Length = 251

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 112/226 (49%), Gaps = 2/226 (0%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIF 198
           G   +   + + FL   I +M  +G++ + +V++ISF  GAVI  Q    + S +     
Sbjct: 21  GRVFSRPERMRMFLKQYITEMTQLGINSIGIVLIISFFIGAVICIQMKLNIQSPWMPRWV 80

Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258
           +      + L E    +  +++AG+ GS I +E+G+M++ ++IDA+  MG++    LI P
Sbjct: 81  AGYTTREILLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGINSACYLILP 140

Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318
           +I  L+  +P L I ++ + IIGA    +  + I      +          ++  +IK+ 
Sbjct: 141 KIIGLLTIMPFLVIFSSATGIIGAYGTAYIGHIIAPDDLTAGLQHAFIPWFVWMSIIKSQ 200

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           F A  I  V    G+ V   S ++GK  T  VV S S++I+   +F
Sbjct: 201 FFAFIISSVPAFCGYTVEGGSVNVGKASTDAVVTS-SVLILFSDVF 245


>gi|330996070|ref|ZP_08319964.1| hypothetical protein HMPREF9442_01039 [Paraprevotella xylaniphila
           YIT 11841]
 gi|329574067|gb|EGG55645.1| hypothetical protein HMPREF9442_01039 [Paraprevotella xylaniphila
           YIT 11841]
          Length = 248

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 109/230 (47%), Gaps = 23/230 (10%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           + + F    I++M  +GV  + +V+LISF  GAVI  Q    +       F     +   
Sbjct: 26  RMRMFFKQYIKEMSQLGVDSIGIVLLISFFIGAVICIQIKLNIQSPWMPKFVTGYTT--- 82

Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
            REI +L     +  +++AG+ GS I +EIG+M++ ++IDA+  MG++    LI P++  
Sbjct: 83  -REIMLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALEIMGVNSANYLILPKVLG 141

Query: 263 LIISLPLLTILANFSAIIGA-------SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           ++  +P L   + FS  +GA        ++      +     F+ ++       ++ G I
Sbjct: 142 MMTMMPFLVCFSIFSGFVGAYATSIIGQVITMDDLTLGLQHDFNEWY-------VWMGFI 194

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           K+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D L  
Sbjct: 195 KSIFFAFVITSVSAFYGYTVEGGSVEVGKASTDSVVSSSVLILFSDVLLT 244


>gi|302327111|gb|ADL26312.1| putative ABC transporter, permease protein [Fibrobacter
           succinogenes subsp. succinogenes S85]
          Length = 262

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 89/164 (54%), Gaps = 7/164 (4%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              ++ L +         S+ FK    ++I Q ++ GV   P +  ++ + G V+     
Sbjct: 1   MGQLIALFLRTVASLFDKSHNFKSDSRNIILQTFFTGVEIFPPLFAVATLFGTVVI---I 57

Query: 188 FQLSQFGAEIFSID---LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           +  S  G   FS +   L+ ++ +RE+  + TA +IAGR+GS++   IGSM IN E+DA+
Sbjct: 58  YLFSLMGKMGFSNNIGFLIVVIIIRELSPIFTAFLIAGRTGSSLTTYIGSMVINSEVDAL 117

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            TMG++ +R L+ P +    I++ ++ I+ + SA IGA  ++ K
Sbjct: 118 ATMGINPIRYLVMPSVIGGTIAMIIMNIIFSTSA-IGAGFLLTK 160


>gi|114766131|ref|ZP_01445135.1| membrane protein [Pelagibaca bermudensis HTCC2601]
 gi|114541591|gb|EAU44633.1| membrane protein [Roseovarius sp. HTCC2601]
          Length = 260

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 86/173 (49%), Gaps = 4/173 (2%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +PVV L +  TG  +A Q     ++F AE     +++I  +RE+G +L  +MIA R  S+
Sbjct: 57  LPVVGLTAVFTGGALALQIYSGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSS 116

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I AEI +MK+ E+IDA+ T+    ++ L+ PR+ A +I +PLL  + +   I G   V  
Sbjct: 117 IAAEIATMKVTEQIDALVTLSTHPMKYLVVPRLLAALIVVPLLVAVGDVIGIFGGYFVAT 176

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
                  A +           +I + L+K     CA G +A   G   G+ S 
Sbjct: 177 GSLGFNPAAYLENTVDFLEPLDIVSSLVK----GCAFGGIAALMGCFYGMQSG 225


>gi|260433527|ref|ZP_05787498.1| membrane protein [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417355|gb|EEX10614.1| membrane protein [Silicibacter lacuscaerulensis ITI-1157]
          Length = 260

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 99/195 (50%), Gaps = 7/195 (3%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +PVV L +  TG  +A Q     ++F AE     +++I  +RE+G ++  +MIA R  S+
Sbjct: 57  LPVVGLTTIFTGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVMVGLMIAARVTSS 116

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I AEI +MK+ E+IDA+ T+    ++ L +PR+ A +I++P L  + +   I G   V  
Sbjct: 117 IAAEIATMKVTEQIDALVTLSTHPMKYLTAPRVLAALITVPALVAVGDIIGIAGGYAVAT 176

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV- 346
           +      A +           +I + L+K      A G++A   G   G++S    + V 
Sbjct: 177 QNLGFNPAAYLKNTVDFLEPLDILSSLVK----GAAFGMIAAIMGCYFGMNSGRGAQGVG 232

Query: 347 --TTCVVQSISIVII 359
             T   V++ +++I+
Sbjct: 233 RATKSSVEAAAVLIL 247


>gi|50261859|gb|AAT72482.1| AT1G19800 [Arabidopsis lyrata subsp. lyrata]
          Length = 205

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 85/161 (52%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           ++Q+   G   + V +L S   G     Q   + ++ G       ++++   RE+  ++T
Sbjct: 43  LQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFTRLGLNRSIGGVLALAFSRELSPVIT 102

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           ++++AGR GSA  AE+G+M+++E+ D +R +G D +  LI+PR+ A  ++LP LT++   
Sbjct: 103 SIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADPIDYLITPRVIASCLALPFLTLMCFT 162

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
             +  ++++    Y I   +     H      +I + +IK+
Sbjct: 163 VGMASSALLSDAVYGISINIIMDSAHRALRPWDIVSAMIKS 203


>gi|207110315|ref|ZP_03244477.1| hypothetical protein HpylH_14585 [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 113

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 39/110 (35%), Positives = 59/110 (53%)

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H T    +   G+
Sbjct: 2   LVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLHDTVGWNHFLVGI 61

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           +KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+ F
Sbjct: 62  VKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDACF 111


>gi|289642565|ref|ZP_06474708.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
 gi|289507653|gb|EFD28609.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
          Length = 286

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 78/153 (50%)

Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268
           REI    T + +AG  G+A+ A++G+ +I EE+DA++ +GLD +R+L+ PR+ A+ +   
Sbjct: 116 REISPFCTGMAVAGVMGTALTADLGARRIREELDAMKVLGLDAMRVLVLPRVIAITVMTA 175

Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328
              I+     +  A I      D     FFS F S  T+ ++   ++K   +   IGIV 
Sbjct: 176 AFNIVGVAVGVAMAMISGTVIGDTSAGSFFSVFLSNVTVPDLVGTVVKTVLIGFFIGIVC 235

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            ++G         +G+ V   VV   + V +I+
Sbjct: 236 AQKGLNARGGPEGVGRAVNEAVVLCFAAVWVIN 268


>gi|313204340|ref|YP_004042997.1| hypothetical protein Palpr_1873 [Paludibacter propionicigenes WB4]
 gi|312443656|gb|ADQ80012.1| protein of unknown function DUF140 [Paludibacter propionicigenes
           WB4]
          Length = 246

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 95/191 (49%), Gaps = 22/191 (11%)

Query: 135 VISNTGEFC-------ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
           +++NTG++        A   ++K F     +++  +G+  +P+V +IS   G ++  Q  
Sbjct: 3   LLNNTGKYVLLMKRVFAKPDRWKMFFRQFPKELEKLGLQSLPIVAIISIFIGFIMTMQTK 62

Query: 188 FQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
              +     +++  L++    L E    +  +++AG+ GS I +EIG+M+I E+IDA+  
Sbjct: 63  LNTANPLLPVYTTGLVTRDTLLLEFSSTILCLILAGKVGSNIASEIGTMRITEQIDALEI 122

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGA-------SIVIW-------KYYDI 292
           MG++    LI P+I A II +P L + +    I G        SI+         +Y  +
Sbjct: 123 MGVNSANYLILPKIAAFIIMMPFLVVFSMALGIFGGYFVGVLTSIMTTGDYLTGIQYAFV 182

Query: 293 PFAVFFSRFHS 303
           PF VF+S   S
Sbjct: 183 PFYVFYSLIKS 193


>gi|254436878|ref|ZP_05050372.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
 gi|198252324|gb|EDY76638.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
          Length = 258

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 76/140 (54%), Gaps = 10/140 (7%)

Query: 156 LIRQMYY----------VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
           L+R  +Y          +G   +PVV L +F TG  +A Q     ++F AE     +++I
Sbjct: 33  LVRPPFYGREFATALLQIGYFSLPVVGLTAFFTGGALALQIYSGGARFSAEAVVPQIVAI 92

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
             +RE+G +L  +MIA R  S+I AEI +MK+ E+IDA+ T+    ++ L  PR+ A  +
Sbjct: 93  GMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQIDALVTLSTHPMKYLTLPRVLAATL 152

Query: 266 SLPLLTILANFSAIIGASIV 285
            +P+L  + +   I G  +V
Sbjct: 153 VMPILVGVGDIIGIYGGFLV 172


>gi|145352678|ref|XP_001420665.1| ABC(membrane) family transporter: toluene tolerance [Ostreococcus
           lucimarinus CCE9901]
 gi|144580900|gb|ABO98958.1| ABC(membrane) family transporter: toluene tolerance [Ostreococcus
           lucimarinus CCE9901]
          Length = 308

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 93/167 (55%), Gaps = 6/167 (3%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           KF+  S +   + G V+      CA   +   +  +L +Q+  VG   + V +L S   G
Sbjct: 62  KFLWRSAATGLLFGSVLYR----CARQPRRVNWEQTL-QQIARVGPQTLGVSLLTSSFVG 116

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V   Q   + ++ G +     L+ +   RE+  ++ A+++ GR GS+I AE+G+M++ E
Sbjct: 117 MVFTIQFCKEFAKVGLKNAIGGLLGLAFARELTPVICAIVLTGRIGSSIAAELGTMQVTE 176

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           ++D +  +G D V  L+ PR+ A  +SLP+L+I+ +F+  +GASI++
Sbjct: 177 QVDQLTVLGTDPVDYLVIPRVIACAVSLPILSII-SFAQALGASILL 222


>gi|183983837|ref|YP_001852128.1| YrbE family protein, YrbE5A [Mycobacterium marinum M]
 gi|183177163|gb|ACC42273.1| YrbE family protein, YrbE5A [Mycobacterium marinum M]
          Length = 289

 Score = 69.7 bits (169), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 98/205 (47%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +RQ  ++  + V   IL+S      ++ Q A    Q GA   +     +  +R+   L+ 
Sbjct: 69  VRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGATSLAGAASGLAVIRQGASLVA 128

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV++A   GSAI A++GS  + EE DA+  MG+  +R L+ PR  A I+    LT +  F
Sbjct: 129 AVLMASAVGSAITADLGSRTMREETDAMEVMGVSVIRRLVVPRFAAAIMIGVALTGVVCF 188

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
                + +    + +     F + F S AT  ++F  L KA      + +V+ ++G +  
Sbjct: 189 VGFFASYMFNVYFQNGAPGSFVATFASFATTDDMFLALFKAVIFGAIVAVVSAQKGLSTK 248

Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361
                +   V   VV+SI +++I++
Sbjct: 249 GGPTGVANSVNAAVVESILVLMIVN 273


>gi|120405353|ref|YP_955182.1| hypothetical protein Mvan_4400 [Mycobacterium vanbaalenii PYR-1]
 gi|119958171|gb|ABM15176.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 281

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 113/234 (48%), Gaps = 11/234 (4%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP----VVILISFVT---GA 180
           Q    G  + +TG+   ++  ++  +L  I QM + GV  +      V+++SF+T   GA
Sbjct: 27  QTLFYGHTLRSTGD---AAIHYRAEILRQIAQMGF-GVGALAAIGGTVVIVSFLTVSVGA 82

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           ++A  G  QLSQ G E  +  + +   +R IG L+  + +A   G+   A++G+M+INEE
Sbjct: 83  LVAVIGFNQLSQVGVEALTGFISAFFNVRLIGPLIAGIALAATIGAGTTAQLGAMRINEE 142

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+  MG+  V  L S R+ A  + +  L  +A  SA + A +    +Y     V+   
Sbjct: 143 IDALEVMGVRSVSYLASTRLIAGTLVVVPLYCVALISAFVAAKVGTTVFYGQSVGVYEHY 202

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
           F++     ++    + A  MA  I +V    GF        +G+ V   V  S+
Sbjct: 203 FYTFLNPDSVVWSFLLAVTMAVVIMLVHTYYGFNAAGGPAGVGQAVGQSVRASL 256


>gi|315442434|ref|YP_004075313.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|315260737|gb|ADT97478.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 285

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 100/212 (47%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +RQ  ++  + V   +L++   G  ++ Q A    Q GA   +     +  +R+   L  
Sbjct: 65  VRQGAFMAGTAVLPTVLVALPIGVTLSIQFALLAGQVGATSLAGAASGLAVIRQAASLTA 124

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A+++A   GSAI A++GS  + EE DA+  MG+  +R L+ PR  A I+    LT +  F
Sbjct: 125 AILMAAAVGSAITADLGSRTMREETDAMEVMGVSVIRRLVVPRFAAAIMIGVALTGVVCF 184

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
              + + +    + +     F + F S  T  ++   L+KA      + IV+ ++G +  
Sbjct: 185 VGFLASYLFNVYFQNGAPGSFVATFASFTTTGDMIVALVKAVIFGAIVAIVSCQKGMSTR 244

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
                +   V   VV+SI I+++++   +  Y
Sbjct: 245 GGPTGVANSVNAAVVESILILMVVNVAISQLY 276


>gi|255037710|ref|YP_003088331.1| hypothetical protein Dfer_3962 [Dyadobacter fermentans DSM 18053]
 gi|254950466|gb|ACT95166.1| protein of unknown function DUF140 [Dyadobacter fermentans DSM
           18053]
          Length = 242

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 77/128 (60%), Gaps = 1/128 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM-SILQLREIGVL 214
           L+ +   +GVS + +V ++S   GAV   Q A+ L      I ++ L+   +++ E+   
Sbjct: 28  LMEECVGIGVSSIFIVAIVSTFIGAVSCIQTAYNLVSPIIPISTVALIVRDMEILELAPT 87

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +T +++AG+ GS I +E+G+M+I E+IDA+  MG++    L+ P++ A +++ P+L I +
Sbjct: 88  ITCIVLAGKVGSNIASELGTMRITEQIDALEVMGINSSSYLVLPKVVAAMLTFPMLVIFS 147

Query: 275 NFSAIIGA 282
            F  I+G 
Sbjct: 148 AFLGILGG 155


>gi|54027028|ref|YP_121270.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54018536|dbj|BAD59906.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 284

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 117/225 (52%), Gaps = 22/225 (9%)

Query: 157 IRQMYYV-GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           IRQ  ++  VS  P V +   +   V  Q GA  ++Q GA  F   +  +  +R+   L+
Sbjct: 64  IRQCAFMSNVSAAPTVFVAIPIAVVVSIQVGAL-VNQVGATTFIGAVAGLGIIRQGAPLV 122

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR-IWALIISLPLLTILA 274
           T++MIAG  GSAI A++GS  I EEIDA+  MG++ VR L++PR + A+++S+    +L 
Sbjct: 123 TSLMIAGAVGSAICADLGSRTIREEIDAMMVMGVNPVRRLVAPRLVAAVLVSM----LLC 178

Query: 275 NFSAIIG-ASIVIWKYY---DIPFAVFFSRFHSTATLANIFTGLIKA-------PFMACA 323
            F   +G A+  ++  Y     P + F   F S A  +++   L+KA         +AC 
Sbjct: 179 GFIVFVGFATAYMFNVYAQSGTPGS-FIGSFASFAVASDLIVALVKAAIFGALTAIIACD 237

Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           IG+ A  +G   GV +N++   V T  +   +  II+  L+   +
Sbjct: 238 IGLHA--KGGPGGV-ANAVNSAVVTSALMLFATNIILTQLYNTLF 279


>gi|300865114|ref|ZP_07109939.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300336885|emb|CBN55089.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 290

 Score = 69.3 bits (168), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 84/161 (52%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +I  +  VG+  +  V+LI+   G +   Q A +L +FGA        +I   RE+  +L
Sbjct: 70  VIEHLVTVGLGSLRAVLLIALFAGMIFTIQSARELIRFGAVGAVGGAFAIAFCRELAPVL 129

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA ++AG+ GS   AEIG M++ E++DA+  +  + V  L+ PR+ A  I LP+LTI + 
Sbjct: 130 TAGVVAGQVGSGFAAEIGEMQVTEQVDALYMLKTNPVDYLVLPRVVACCIMLPILTIFSV 189

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316
              I G +     +Y +P  +F     +     ++ T ++K
Sbjct: 190 VVGIGGGAFAAAIFYHLPPGMFLESVRTFLEPWDLVTVVVK 230


>gi|308810118|ref|XP_003082368.1| unnamed protein product [Ostreococcus tauri]
 gi|116060836|emb|CAL57314.1| unnamed protein product [Ostreococcus tauri]
          Length = 361

 Score = 69.3 bits (168), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 79/130 (60%), Gaps = 1/130 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           ++Q+  VG   + V +L S   G V   Q   + ++ G +     L+ +   RE+  ++ 
Sbjct: 137 LQQIARVGPQTLGVSLLTSSFVGMVFTIQFCKEFAKVGLKNAIGGLLGLAFARELTPVIC 196

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A+++ GR GS+I AE+G+M++ E++D +  +G D V  L+ PR+ A  ISLP+L++L +F
Sbjct: 197 AIVLTGRIGSSIAAELGTMQVTEQVDQLTVLGTDPVDYLVIPRVIACSISLPILSVL-SF 255

Query: 277 SAIIGASIVI 286
           +  +GASI++
Sbjct: 256 AQSLGASILL 265


>gi|108798492|ref|YP_638689.1| hypothetical protein Mmcs_1522 [Mycobacterium sp. MCS]
 gi|119867593|ref|YP_937545.1| hypothetical protein Mkms_1545 [Mycobacterium sp. KMS]
 gi|108768911|gb|ABG07633.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
 gi|119693682|gb|ABL90755.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
          Length = 271

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 87/163 (53%), Gaps = 2/163 (1%)

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L +FGA  F+    +   + +IG ++T +++AG   +A+ A++G+  I +E+DA+R MG+
Sbjct: 88  LLEFGAADFAGTGAAYGTVTQIGPVVTVLVVAGAGATAMCADLGARTIRDELDALRVMGV 147

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGA-SIVIWKYYDIPFAVFFSRFHSTATLA 308
           D ++ L+ PR+ A  +   LL+ +     ++G  +  ++  +  P A F S      + A
Sbjct: 148 DPIQTLVVPRVLAATVVATLLSSVVILVGLVGGFAFSVFVQHVTPGA-FISGLTVITSAA 206

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
           ++   LIKA     A G++A  +G +VG     +G  V   VV
Sbjct: 207 DVVISLIKAALFGLAAGLIACYKGISVGGGPAGVGNAVNETVV 249


>gi|41407947|ref|NP_960783.1| hypothetical protein MAP1849 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|254775059|ref|ZP_05216575.1| hypothetical protein MaviaA2_10356 [Mycobacterium avium subsp.
           avium ATCC 25291]
 gi|41396301|gb|AAS04166.1| hypothetical protein MAP_1849 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 286

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 99/205 (48%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +RQ  ++  + V   IL+S      ++ Q A    Q GA   +     +  +R+   L+ 
Sbjct: 66  VRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGATSLAGAASGLAVIRQGASLVA 125

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV++A   GSAI A++GS  + EE DA+  MG+  VR L+ PR  A ++    LT +  F
Sbjct: 126 AVLMASAVGSAITADLGSRTMREETDAMEVMGVSVVRRLVVPRFAAAVMIGVALTGVVCF 185

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           +    + +    + +     F S F S AT  ++   L+KA      + IV+ ++G +  
Sbjct: 186 AGFFASYMFNVYFQNGAPGSFVSTFASFATTGDMILALLKAIVFGAIVAIVSSQKGLSTK 245

Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361
                +   V   VV++I +++I++
Sbjct: 246 GGPTGVANSVNAAVVEAILLLMIVN 270


>gi|56417212|ref|YP_154286.1| hypothetical protein AM1212 [Anaplasma marginale str. St. Maries]
 gi|222475576|ref|YP_002563993.1| hypothetical protein AMF_912 [Anaplasma marginale str. Florida]
 gi|254995379|ref|ZP_05277569.1| hypothetical protein AmarM_05554 [Anaplasma marginale str.
           Mississippi]
 gi|255003566|ref|ZP_05278530.1| hypothetical protein AmarPR_05019 [Anaplasma marginale str. Puerto
           Rico]
 gi|255004692|ref|ZP_05279493.1| hypothetical protein AmarV_05379 [Anaplasma marginale str.
           Virginia]
 gi|56388444|gb|AAV87031.1| hypothetical protein AM1212 [Anaplasma marginale str. St. Maries]
 gi|222419714|gb|ACM49737.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
          Length = 259

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 112/217 (51%), Gaps = 12/217 (5%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           RQ + +    +P+V + +  TG  +  Q         A  F   ++++  +RE+G +L  
Sbjct: 48  RQFFEMWFFSLPIVGMTALFTGGALVLQDTLVGGGKVAAHFMAGIVTVAIVRELGPVLIG 107

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +++AGR G+A+ AEIG+M+I E+IDA+ T+  D  + L++PR+ AL++++P+L I  +F 
Sbjct: 108 LIVAGRVGAAVAAEIGTMRITEQIDALDTLEADPFQYLVAPRVIALMVAMPVLIIYTDFL 167

Query: 278 AIIGASIV--IWKYYD----IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
            I G   V  +   Y+    I     F RF       ++  GL+KA      I +V    
Sbjct: 168 GIFGGYAVGTLGLGYNPNEYIGGVAEFLRFK------DVTEGLVKAVSFGFVIAMVGCYS 221

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           G+     +  +G   T  VV S  ++++++ +  +FY
Sbjct: 222 GYYCSGGARGVGAATTNTVVSSSMLIVLLNYVITVFY 258


>gi|110638590|ref|YP_678799.1| ABC transporter permease [Cytophaga hutchinsonii ATCC 33406]
 gi|110281271|gb|ABG59457.1| ABC transporter, permease [Cytophaga hutchinsonii ATCC 33406]
          Length = 243

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 15/214 (7%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSI-DLMSIL 206
           KF  +    I +   +G + + +V ++S   GAV   Q A  L      I+ +  ++  +
Sbjct: 20  KFSVYWKLTIDECILIGTNSIFIVAIVSSFIGAVTCIQTAANLVSPLVPIYVVASVVREM 79

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            + E+    T V++AG+ GS+I  ++G+M+I E++DA+  MG++    LI P+I A +I+
Sbjct: 80  SILELAPTFTCVVLAGKVGSSIAGQLGTMRITEQVDALEVMGINSASYLILPKILASLIT 139

Query: 267 LPLLTILANFSAIIGASIV-----IWKYYDIPFAVF--FSRFHSTATLANIFTGLIKAPF 319
           +P+L   A   +I+G  I      I    D  + V   F+ F       N+   LIKA  
Sbjct: 140 IPMLVTFAGLLSILGGYIAGILGNIITTQDFVYGVQIDFNEF-------NVTFALIKAFV 192

Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
            A  I  ++  +G+     +  +G+  TT VV S
Sbjct: 193 FAFLISSISAYQGYFTKGGALEVGQSSTTAVVNS 226


>gi|118466063|ref|YP_881276.1| TrnB1 protein [Mycobacterium avium 104]
 gi|254774784|ref|ZP_05216300.1| TrnB1 protein [Mycobacterium avium subsp. avium ATCC 25291]
 gi|118167350|gb|ABK68247.1| TrnB1 protein [Mycobacterium avium 104]
          Length = 255

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 97/187 (51%), Gaps = 10/187 (5%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +LI FV   ++ + GA  LS  GA + S+         ++G ++TA++++G   +A
Sbjct: 57  IPYTVLIVFVLNILLVEIGAGDLSGAGAGLASVT--------QVGPVVTAMVVSGAGSTA 108

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI-VI 286
           + A++G+  I EEIDA++ +G++ V+ L+ PRI A      +L  +   + + G+ I V+
Sbjct: 109 MCADLGARTIREEIDAMKVIGVNPVQALVVPRIIAATFVAVMLYAVVAVTGLTGSYIFVV 168

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
           +  +  P A F +       L  +   LIKA     + G++A  +G +VG     +G  V
Sbjct: 169 FVQHVTPGA-FVAGMTLVTGLPQVVISLIKATLFGLSAGLIACYKGLSVGGGPTGVGNAV 227

Query: 347 TTCVVQS 353
              VV S
Sbjct: 228 NETVVFS 234


>gi|169631675|ref|YP_001705324.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169243642|emb|CAM64670.1| Putative YrbE family protein [Mycobacterium abscessus]
          Length = 288

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 129/287 (44%), Gaps = 10/287 (3%)

Query: 84  LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFC 143
           + +F      +   P R     + K    ++ K  V+ +  + SQ  +LG+      ++ 
Sbjct: 1   MTTFEGTSPARPATPSRDAVSGALKE---YVRKHPVQAVETAGSQI-VLGV---RAMQYM 53

Query: 144 ASSYKFKGFL-LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDL 202
            S    + F     I Q  ++  S V   +L++   G  ++ Q A    Q GA   +   
Sbjct: 54  FSDIVHRAFPWREFIHQGAFMAGSAVVPTLLVAIPIGVTLSIQFALLAGQVGASSLAGAA 113

Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
             +  +R+   L+ AV++A   GSAI A++GS  + EEIDA+  MG+  +R L+ PR+ A
Sbjct: 114 SGVAIVRQGASLVAAVLMASAVGSAITADLGSRTMREEIDAMEVMGVSVIRRLVVPRVAA 173

Query: 263 LIISLPLLTILANFSAIIGASIV-IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMA 321
            ++    LT    F   + + +  ++  +  P + F + F S   + ++   L+KA    
Sbjct: 174 AVLVGVGLTGTTCFVGFLASYLFNVYFQHGAPGS-FVATFASFTRVDDLVLALLKAILYG 232

Query: 322 CAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
             + IVA  +G         +   V   VV+SI ++++I+ L +  Y
Sbjct: 233 LIVAIVACDKGLTTKGGPAGVANSVNAAVVESILVLMLINVLVSQVY 279


>gi|296167380|ref|ZP_06849782.1| integral membrane protein YrbE1A [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295897324|gb|EFG76928.1| integral membrane protein YrbE1A [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 271

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 12/200 (6%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P+ +L+ F    ++AQ GA  LS  GA I ++         ++G L T +++AG   +A
Sbjct: 72  IPLTVLLIFTLNVLLAQFGAADLSGAGAAIGAVT--------QLGPLTTVLVVAGAGSTA 123

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+  I EEIDA+  +G+D +  L+ PR+ A  +   LL  L     ++G  +   
Sbjct: 124 ICADLGARTIREEIDAMEVLGIDPIHRLVVPRVIAATLVATLLNGLVITVGLVGGYLFGV 183

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG---- 343
              ++    + +   +   L  +    +KA       G+V    G  V   S  LG    
Sbjct: 184 YLQNVSGGAYLATLTTITGLPEVVIATVKAAIFGLIAGLVGCYRGLTVRGGSKGLGTAVN 243

Query: 344 KKVTTCVVQSISIVIIIDSL 363
           + V  CVV   ++ +++ ++
Sbjct: 244 ETVVLCVVALYAVNVVLTTI 263


>gi|269128028|ref|YP_003301398.1| hypothetical protein Tcur_3829 [Thermomonospora curvata DSM 43183]
 gi|268312986|gb|ACY99360.1| protein of unknown function DUF140 [Thermomonospora curvata DSM
           43183]
          Length = 288

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 59/96 (61%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           VV  ++  TGA++  QG   L + GAE FS  + S   +RE+  ++  V +  + GSA  
Sbjct: 79  VVATMAMATGAMVGMQGYPSLERIGAEAFSGVMASFANVREVTPIIAGVALIAQVGSAFT 138

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
           AEIG+M+I+EEIDA+  MG++ +  L+  R+ A +I
Sbjct: 139 AEIGAMRISEEIDALEVMGINSLTFLVCTRVAAGVI 174


>gi|240168187|ref|ZP_04746846.1| integral membrane protein YrbE1A [Mycobacterium kansasii ATCC
           12478]
          Length = 268

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 93/199 (46%), Gaps = 14/199 (7%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           VP  +L+ F    ++AQ GA  LS  GA I ++         ++G  +T +++AG   +A
Sbjct: 69  VPFTVLLIFTLNVLLAQFGAADLSGAGAAIGAVT--------QLGPQVTVLVVAGAGSTA 120

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+  I EEIDA+  +G+D +  L+ PR+ A  +   LL  L     ++G  +   
Sbjct: 121 ICADLGARTIREEIDAMEVLGIDPIHRLVVPRVIAATLIATLLNALVITVGLVGGYLFGV 180

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
              ++    + +   +   L  +   ++KA       G+V    G  V   S  LG  V 
Sbjct: 181 YLQNVSGGAYLATLTTITGLPEVVIAMVKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVN 240

Query: 348 TCVVQSISIVIIIDSLFAI 366
                  ++V+ + +LFA+
Sbjct: 241 E------TVVLCVVALFAV 253


>gi|218262319|ref|ZP_03476833.1| hypothetical protein PRABACTJOHN_02507 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223470|gb|EEC96120.1| hypothetical protein PRABACTJOHN_02507 [Parabacteroides johnsonii
           DSM 18315]
          Length = 248

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 118/227 (51%), Gaps = 24/227 (10%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           ++  F   LI+++Y +GV  + +VI+IS   G VIA Q +  +S      F+I   +   
Sbjct: 24  RWSMFFKQLIKEIYKLGVDSLWIVIIISIFIGTVIAIQISLNISSPLIPKFTIGYTT--- 80

Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
            REI +L     + ++++AG+ GS I +EIG+M++ E+IDA+  MG++    LI P++  
Sbjct: 81  -REIILLEFSSSIMSLILAGKVGSNIASEIGTMRVTEQIDAMEIMGVNSANFLILPKMVG 139

Query: 263 LIISLPLLTILANFSAIIG--------ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           ++  +P+L I + F+ I+G         + +    ++     +F+ F+       I+  +
Sbjct: 140 MMTFIPVLVIFSMFTGILGGIAASHSTGTGMTPASFEYGLQFYFNEFY-------IWYSI 192

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           IK+   A  I  +A   G+ V   +  +GK  T  VV S  ++++ D
Sbjct: 193 IKSVVYAFIISSIAAYFGYNVKGGALEVGKASTNAVVMSSIMILLAD 239


>gi|254819657|ref|ZP_05224658.1| hypothetical protein MintA_07029 [Mycobacterium intracellulare ATCC
           13950]
          Length = 280

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 99/205 (48%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +RQ  ++  + V   IL+S      ++ Q A    Q GA   +     +  +R+   L+ 
Sbjct: 60  VRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGATSLAGAASGLAVIRQGASLVA 119

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV++A   GSAI A++GS  + EE DA+  MG+  +R L+ PR  A ++    LT +  F
Sbjct: 120 AVLMASAVGSAITADLGSRTMREETDAMEVMGVSVIRRLVVPRFAAAVMIGVALTGVVCF 179

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           +    + +    + +     F S F S AT  ++   L+KA      + IV+ ++G +  
Sbjct: 180 AGFFASYMFNVYFQNGAPGSFVSTFASFATTGDMVLALLKAIVFGAIVAIVSSQKGLSTK 239

Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361
                +   V   VV++I +++I++
Sbjct: 240 GGPTGVANSVNAAVVEAILLLMIVN 264


>gi|312131750|ref|YP_003999090.1| hypothetical protein Lbys_3075 [Leadbetterella byssophila DSM
           17132]
 gi|311908296|gb|ADQ18737.1| protein of unknown function DUF140 [Leadbetterella byssophila DSM
           17132]
          Length = 243

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 1/210 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQ-GAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           I +   +G+  + +V +++F  GAV   Q  A  +S         +++  + L E+    
Sbjct: 30  IDECMMIGIDSLLIVCIVAFFIGAVTCVQINANLVSPIIPTYIVSNIVRDMMLLELSSTF 89

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
             V++AG+ GS I +E+G+M+I E+I+A+  MG++    L+ P++ A  +  P+L IL+ 
Sbjct: 90  ICVILAGKVGSNIASELGTMRITEQIEALEVMGINAASYLVLPKVLAAFVMFPILAILSG 149

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
           F  I+G  I       I    +      +    N+   +IK+      I  ++  +GF  
Sbjct: 150 FIGIVGGYIAGTATGIITPEQYIYGIRFSFIPFNLVIPIIKSAVFGVLIATISAYKGFYT 209

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
              +  +GK  TT V  S   ++I D L A
Sbjct: 210 RGGALEVGKVSTTAVTNSCIAILIADYLLA 239


>gi|126436744|ref|YP_001072435.1| hypothetical protein Mjls_4172 [Mycobacterium sp. JLS]
 gi|126236544|gb|ABN99944.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 257

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 94/194 (48%), Gaps = 8/194 (4%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L  F    ++ + GA   S  GA + ++         +IG ++T ++IAG   +A
Sbjct: 60  IPFTVLTVFTINVLLVEIGAADFSGTGAALGAVT--------QIGPIVTVLVIAGAGATA 111

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + A++G+  I EEIDA+R +G++ ++ L+ PRI A  +   +LT L     I+G+ I   
Sbjct: 112 MCADLGARTIREEIDALRVLGINPIQALVVPRIVAATVVSLMLTSLVTMVGIVGSFIFSV 171

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
            + ++    F +          +   L+KA     A  ++A  +G +VG     +G  V 
Sbjct: 172 YFQNVTPGAFAAGLTLLVGTPEVVVNLLKAAIFGLAASLIACYKGISVGGGPQGVGNAVN 231

Query: 348 TCVVQSISIVIIID 361
             VV +   + +I+
Sbjct: 232 ETVVYTFMALFVIN 245


>gi|118616793|ref|YP_905125.1| integral membrane protein YrbE1A [Mycobacterium ulcerans Agy99]
 gi|118568903|gb|ABL03654.1| conserved hypothetical integral membrane protein YrbE1A
           [Mycobacterium ulcerans Agy99]
          Length = 267

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 12/200 (6%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P+ +L+ F    ++AQ GA  +S  GA I ++         ++G L T +++AG   +A
Sbjct: 68  IPLTVLLIFTLNVLLAQFGAADISGAGAAIGAVT--------QLGPLTTVLVVAGAGSTA 119

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+  I EEIDA+  +G+D +  L+ PR+ A      LL  L     ++G  +   
Sbjct: 120 ICADLGARTIREEIDAMEVLGIDPIHRLVVPRVIAATFVATLLNALVITVGLVGGYLFGV 179

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG---- 343
              +I    + +   +   +  +   ++KA       G+V    G  V   S  LG    
Sbjct: 180 YLQNINGGAYLATLTTITGMPEVTIAMVKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVN 239

Query: 344 KKVTTCVVQSISIVIIIDSL 363
           + V  CVV   ++ +I+ ++
Sbjct: 240 ETVVLCVVALYAVNVILTTI 259


>gi|284034023|ref|YP_003383954.1| hypothetical protein Kfla_6152 [Kribbella flavida DSM 17836]
 gi|283813316|gb|ADB35155.1| protein of unknown function DUF140 [Kribbella flavida DSM 17836]
          Length = 275

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 93/199 (46%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V+  ++F TG  +  QG   L+Q G   F+  + + +  REIG L+  + +A   G  
Sbjct: 64  VGVITFLAFFTGTEVGLQGYSALNQIGTSAFAGFVSAYINTREIGPLIAGIALAATVGCG 123

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
             A++G+M+I+EEIDA+  M +  +  L++ RI A +I++  L ++   S+     + + 
Sbjct: 124 FTAQLGAMRISEEIDALEVMAIPSLPFLVTTRIIAGLIAVVPLYVVGLLSSYFATRLTVT 183

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
            +Y      +   FH      ++     K    A  + +V    G+        +G  V 
Sbjct: 184 TFYGQSTGTYDHYFHLFLPPGDVLWSFGKVLVFAVLVILVHCYHGYHASGGPAGVGVAVG 243

Query: 348 TCVVQSISIVIIIDSLFAI 366
             V  SI ++ ++D L ++
Sbjct: 244 RAVRTSIVVINVVDLLLSM 262


>gi|183980441|ref|YP_001848732.1| integral membrane protein YrbE1A [Mycobacterium marinum M]
 gi|183173767|gb|ACC38877.1| conserved hypothetical integral membrane protein YrbE1A
           [Mycobacterium marinum M]
          Length = 267

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 12/200 (6%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P+ +L+ F    ++AQ GA  +S  GA I ++         ++G L T +++AG   +A
Sbjct: 68  IPLTVLLIFTLNVLLAQFGAADISGAGAAIGAVT--------QLGPLTTVLVVAGAGSTA 119

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+  I EEIDA+  +G+D +  L+ PR+ A      LL  L     ++G  +   
Sbjct: 120 ICADLGARTIREEIDAMEVLGIDPIHRLVVPRVIAATFVATLLNALVITVGLVGGYLFGV 179

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG---- 343
              +I    + +   +   +  +   ++KA       G+V    G  V   S  LG    
Sbjct: 180 YLQNINGGAYLATLTTITGMPEVTIAMVKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVN 239

Query: 344 KKVTTCVVQSISIVIIIDSL 363
           + V  CVV   ++ +I+ ++
Sbjct: 240 ETVVLCVVALYAVNVILTTI 259


>gi|41409700|ref|NP_962536.1| hypothetical protein MAP3602 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41398532|gb|AAS06152.1| hypothetical protein MAP_3602 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 271

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 12/200 (6%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P+ +L+ F    ++AQ GA  LS  GA I ++         ++G L T +++AG   +A
Sbjct: 72  IPLTVLLIFTLNVLLAQFGAADLSGAGAAIGAVT--------QLGPLTTVLVVAGAGSTA 123

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+  I EEIDA+  +G+D +  L+ PR+ A  +   LL  L     ++G  +   
Sbjct: 124 ICADLGARTIREEIDAMEVLGIDPIHRLVVPRVIAATLVATLLNGLVITVGLVGGYLFGV 183

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG---- 343
              ++    + +   +   L  +    +KA       G+V    G  V   S  LG    
Sbjct: 184 YLQNVSGGAYLATLTTITGLPEVVIATVKAAVFGLIAGLVGCFRGLTVRGGSKGLGTAVN 243

Query: 344 KKVTTCVVQSISIVIIIDSL 363
           + V  CVV   ++ +++ ++
Sbjct: 244 ETVVLCVVALYAVNVVLTTI 263


>gi|330875108|gb|EGH09257.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 148

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 79/146 (54%), Gaps = 1/146 (0%)

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           SA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  IS+P+L ++ +   I GAS V
Sbjct: 1   SALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFSVVGIWGASWV 60

Query: 286 IWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
              +  +    F+S   ++ +  N +  G+IK+   A  +  +A+ +G+     S  + +
Sbjct: 61  AIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCEPTSEGISR 120

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370
             T  VV +   V+ +D +     F 
Sbjct: 121 ATTRTVVYASLAVLGLDFILTALMFG 146


>gi|183984020|ref|YP_001852311.1| integral membrane protein YrbE3A_1 [Mycobacterium marinum M]
 gi|183177346|gb|ACC42456.1| conserved hypothetical integral membrane protein YrbE3A_1
           [Mycobacterium marinum M]
          Length = 255

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 93/187 (49%), Gaps = 14/187 (7%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L++F+   ++ + GA   S  GA + S+        R+IG ++T +++AG   +A
Sbjct: 58  IPYTVLLTFIENILLTEIGAADFSGTGAALGSV--------RQIGPIVTVLVVAGAGATA 109

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA---LIISLPLLTILANFSAIIGASI 284
           + A++G+  I EE+DA+R MG+D ++ L+ PR+ A   + ++L    IL   S      +
Sbjct: 110 MCADLGARTIREELDALRVMGVDPIQALVVPRVLAATTVSLALSASVILVGLSGAYFFCV 169

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
            I       FA   +    T    ++   L+KA     + G++A  +G +VG     +G 
Sbjct: 170 FIQHVSPGAFAAGLTLIIGT---TDVVIALVKAALFGLSAGLIACYKGISVGGGPAGVGN 226

Query: 345 KVTTCVV 351
            V   VV
Sbjct: 227 AVNETVV 233


>gi|118619125|ref|YP_907457.1| integral membrane protein YrbE3A_1 [Mycobacterium ulcerans Agy99]
 gi|118571235|gb|ABL05986.1| conserved hypothetical integral membrane protein YrbE3A_1
           [Mycobacterium ulcerans Agy99]
          Length = 255

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 93/187 (49%), Gaps = 14/187 (7%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L++F+   ++ + GA   S  GA + S+        R+IG ++T +++AG   +A
Sbjct: 58  IPYTVLLTFIENILLTEIGAADFSGTGAALGSV--------RQIGPIVTVLVVAGAGATA 109

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA---LIISLPLLTILANFSAIIGASI 284
           + A++G+  I EE+DA+R MG+D ++ L+ PR+ A   + ++L    IL   S      +
Sbjct: 110 MCADLGARTIREELDALRVMGVDPIQALVVPRVLAATTVSLALSASVILVGLSGAYFFCV 169

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
            I       FA   +    T    ++   L+KA     + G++A  +G +VG     +G 
Sbjct: 170 FIQHVSPGAFAAGLTLIIGT---TDVVIALVKAALFGLSAGLIACYKGISVGGGPAGVGN 226

Query: 345 KVTTCVV 351
            V   VV
Sbjct: 227 AVNETVV 233


>gi|118464753|ref|YP_884137.1| hypothetical protein MAV_5017 [Mycobacterium avium 104]
 gi|254776559|ref|ZP_05218075.1| hypothetical protein MaviaA2_18089 [Mycobacterium avium subsp.
           avium ATCC 25291]
 gi|118166040|gb|ABK66937.1| conserved hypothetical protein [Mycobacterium avium 104]
          Length = 258

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 12/200 (6%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P+ +L+ F    ++AQ GA  LS  GA I ++         ++G L T +++AG   +A
Sbjct: 59  IPLTVLLIFTLNVLLAQFGAADLSGAGAAIGAVT--------QLGPLTTVLVVAGAGSTA 110

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+  I EEIDA+  +G+D +  L+ PR+ A  +   LL  L     ++G  +   
Sbjct: 111 ICADLGARTIREEIDAMEVLGIDPIHRLVVPRVIAATLVATLLNGLVITVGLVGGYLFGV 170

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG---- 343
              ++    + +   +   L  +    +KA       G+V    G  V   S  LG    
Sbjct: 171 YLQNVSGGAYLATLTTITGLPEVVIATVKAAVFGLIAGLVGCFRGLTVRGGSKGLGTAVN 230

Query: 344 KKVTTCVVQSISIVIIIDSL 363
           + V  CVV   ++ +++ ++
Sbjct: 231 ETVVLCVVALYAVNVVLTTI 250


>gi|254822928|ref|ZP_05227929.1| hypothetical protein MintA_23574 [Mycobacterium intracellulare ATCC
           13950]
          Length = 255

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 12/200 (6%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P+ +L+ F    ++AQ GA  LS  GA I ++         ++G L T +++AG   +A
Sbjct: 56  IPLTVLLIFTLNVLLAQFGAADLSGAGAAIGAVT--------QLGPLTTVLVVAGAGSTA 107

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+  I EEIDA+  +G+D +  L+ PR+ A  +   LL  L     ++G  +   
Sbjct: 108 ICADLGARTIREEIDAMEVLGIDPIHRLVVPRVIAATLVATLLNGLVITVGLVGGYLFGV 167

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG---- 343
              ++    + +   +   L  +    +KA       G+V    G  V   S  LG    
Sbjct: 168 YLQNVSGGAYLATLTTITGLPEVVIATVKAAVFGLIAGLVGCFRGLTVRGGSKGLGTAVN 227

Query: 344 KKVTTCVVQSISIVIIIDSL 363
           + V  CVV   ++ +++ ++
Sbjct: 228 ETVVLCVVALYAVNVVLTTI 247


>gi|134103293|ref|YP_001108954.1| putative ABC-transporter integral membrane protein
           [Saccharopolyspora erythraea NRRL 2338]
 gi|291004488|ref|ZP_06562461.1| putative ABC-transporter integral membrane protein
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133915916|emb|CAM06029.1| putative ABC-transporter integral membrane protein
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 263

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 107/219 (48%), Gaps = 12/219 (5%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           ++Q +++    +    L++   GAVIA Q      Q GA+ F+     +  +++   ++T
Sbjct: 43  VQQCWFIASVTILPTALVAIPFGAVIALQLGSLTRQIGAQSFTGGASVLAIIQQASPIVT 102

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++IAG  GSAI A++GS KI +EIDA+  +G+  V  L+ PR+ A ++   LL  + + 
Sbjct: 103 ALLIAGAGGSAICADLGSRKIRDEIDAMEVLGVSPVHRLVVPRVLAAMLVAVLLNGMVSV 162

Query: 277 SAIIGASIVIWKYYDI------PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330
             ++G       ++++      P A + + F++ A L +I+   +KA       G+VA  
Sbjct: 163 VGVMGG-----YFFNVIMQGGTPGA-YMASFNALAQLPDIWISELKALIFGFLAGVVAAY 216

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
            G         +G  V   VV +  ++  ++ +    Y 
Sbjct: 217 RGLNPPPGPKGVGDAVNQSVVITFLLLFAVNFVLTTIYL 255


>gi|120405558|ref|YP_955387.1| hypothetical protein Mvan_4606 [Mycobacterium vanbaalenii PYR-1]
 gi|119958376|gb|ABM15381.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 255

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 95/187 (50%), Gaps = 14/187 (7%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L++F+   ++ + GA   S  GA + ++        R+IG ++T +++AG   +A
Sbjct: 58  IPYTVLLTFIETILLTEIGASDFSGTGAALGTV--------RQIGPIVTVLVVAGAGATA 109

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW-ALIISLPL--LTILANFSAIIGASI 284
           + A++G+  I EE+DA+R MG++ ++ L+ PR+  A+++SL L    IL   S   GA  
Sbjct: 110 MCADLGARTIREELDALRVMGINPIQALVVPRVLAAMVVSLALSATVILVGLS---GAYF 166

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
            +    D+    F +         ++   L+KA     + G++A  +G +V      +G 
Sbjct: 167 FVVYIQDVSPGAFAAGLTLIIGATDVVIALVKAALFGLSAGLIACYKGISVRGGPAGVGN 226

Query: 345 KVTTCVV 351
            V   VV
Sbjct: 227 AVNETVV 233


>gi|54027607|ref|YP_121849.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54019115|dbj|BAD60485.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 284

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 92/187 (49%), Gaps = 10/187 (5%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P+ +++S   GAV  Q GA         I + + + I+Q  +   L+T++MIAG  GSA
Sbjct: 83  IPIGVIVSIQVGAVAGQVGATSF------IGAANGLGIVQ--QGAPLVTSIMIAGAVGSA 134

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW-ALIISLPLLTILANFSAIIGASIVI 286
           I A++GS  I EEIDA++ MG+D +R L++PR+  A+++S+ L   +     + G    I
Sbjct: 135 ICADLGSRTIREEIDAMKVMGVDPMRRLVAPRLGAAMLVSVLLCGFVVFVGFLTGYIFNI 194

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
           +     P   +   F S A   ++   L+K+        I+A   G         +   V
Sbjct: 195 FAQGGTP-GSYIGTFSSFAVTRDLLVALVKSLIFGLLAAIIACDTGLNTRGGPGGVANSV 253

Query: 347 TTCVVQS 353
            + VV S
Sbjct: 254 NSAVVSS 260


>gi|162451969|ref|YP_001614336.1| putative ABC transport system permease protein [Sorangium
           cellulosum 'So ce 56']
 gi|161162551|emb|CAN93856.1| putative ABC transport system permease protein [Sorangium
           cellulosum 'So ce 56']
          Length = 285

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 24/240 (10%)

Query: 142 FCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ-------LSQFG 194
           +CA   +  G   ++++QMY +G   +  + ++    G ++  Q   Q       L+  G
Sbjct: 58  YCAKGRREPG---AVLQQMYEIGNKSLFFLTVVMGFIGMIMVFQAGQQAKRVIPDLTMLG 114

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
           A          L +R++   + A+M+A R G+ I AEIGSM + E++DA+R    D +  
Sbjct: 115 ATYLE------LLVRDLAASIAALMLATRVGAGIAAEIGSMVVTEQVDALRMCAADPIDY 168

Query: 255 LISPRIWALIISLPLLTILANFSAIIG---ASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           LI PR    I SL + T L  +SA +      +  +  +D+    F +   S     ++ 
Sbjct: 169 LIKPR---FIASLLMTTCLIVWSAAVSFTTGMVTAYSMFDVSPETFMN--VSLVDAGDLA 223

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           TGL K      AI +V+   G +    S  +G   T  VV S   VI+++ L +   F I
Sbjct: 224 TGLAKCVAYGAAIPVVSGHSGLSTFGGSEGVGWATTRAVVNSSLAVIVLNMLISAAAFLI 283


>gi|257054990|ref|YP_003132822.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Saccharomonospora viridis
           DSM 43017]
 gi|256584862|gb|ACU95995.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Saccharomonospora viridis
           DSM 43017]
          Length = 267

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 95/202 (47%), Gaps = 4/202 (1%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
            ++F+ F    ++Q +++    +    L++   G VIA       +Q GA+ F+     +
Sbjct: 40  PFQFREF----VQQFWFIASVSILPTALVAIPFGGVIALHVGSLTTQIGAQSFTGAASVL 95

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
             +++   ++TA++IAG  GSA+ A++GS  I EEIDA++ +G+  ++ L+ PR+ A + 
Sbjct: 96  AIIQQASPIVTALLIAGAGGSAMCADLGSRTIREEIDALKVLGVSPIQRLVVPRVLAAMA 155

Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325
               L  + +   + G         D     + + F + A L +++ G IKA       G
Sbjct: 156 VAVFLNGMVSVVGVCGGYFFNVIMQDGTPGAYLASFSALAQLPDLWIGEIKALVFGFVAG 215

Query: 326 IVAMKEGFAVGVHSNSLGKKVT 347
           +VA   G         +G  V 
Sbjct: 216 VVAAHRGLNPSAGPKGVGDAVN 237


>gi|41408215|ref|NP_961051.1| hypothetical protein MAP2117c [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41396570|gb|AAS04434.1| hypothetical protein MAP_2117c [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 255

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 96/187 (51%), Gaps = 10/187 (5%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +LI FV   ++ + GA  LS  GA + S+         ++G ++TA++++G   +A
Sbjct: 57  IPYTVLIVFVLNILLVEIGAGDLSGAGAGLASVT--------QVGPVVTAMVVSGAGSTA 108

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI-VI 286
           + A++G+  I EEIDA++ +G++ V+ L+ PRI A      +L  +     + G+ I V+
Sbjct: 109 MCADLGARTIREEIDAMKVIGVNPVQALVVPRIIAATFVAVMLYAVVAVIGLTGSYIFVV 168

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
           +  +  P A F +       L  +   LIKA     + G++A  +G +VG     +G  V
Sbjct: 169 FVQHVTPGA-FVAGMTLVTGLPQVVISLIKATLFGLSAGLIACYKGLSVGGGPTGVGNAV 227

Query: 347 TTCVVQS 353
              VV S
Sbjct: 228 NETVVFS 234


>gi|296171119|ref|ZP_06852572.1| integral membrane protein [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295894375|gb|EFG74128.1| integral membrane protein [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 256

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 117/250 (46%), Gaps = 25/250 (10%)

Query: 136 ISNTGEFCASS-----------YKFKGFLLSLIRQMYYVG-VSGVPVVIL-ISFVTGAVI 182
           + + GEF A S           + ++ FLL    Q ++V  VS +P ++L I F    V 
Sbjct: 12  LRSAGEFFAMSLDTFVAMFKLPFPWREFLL----QTWFVARVSIIPTLLLTIPFTVLVVF 67

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
                  L +FGA  FS    +   + +IG ++T +++AG   +A+ A++G+  I++E+D
Sbjct: 68  TMN--ILLVEFGAADFSGTGAATASVTQIGPVVTVLVVAGTGATAMCADLGARAIHDELD 125

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA---SIVIWKYYDIPFAVFFS 299
           A+R MG+D VR L +PR+ A  +    L  L     + G+   S+ I       FA   +
Sbjct: 126 ALRVMGVDPVRRLAAPRVLAATVVAVSLVSLVTLVGLGGSFFFSVFIQHVTPGAFAAGLT 185

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                  L ++  GL+K      A  ++A  +G +VG     +G  V   VV S   + +
Sbjct: 186 LLTH---LPDLVLGLVKGALFGMAAALIACYKGISVGGGPQGVGNAVNETVVYSFIALFV 242

Query: 360 IDSLFAIFYF 369
           I+ +    Y+
Sbjct: 243 INIVATAVYY 252


>gi|311744834|ref|ZP_07718630.1| ABC superfamily ATP binding cassette transporter permease protein
           [Aeromicrobium marinum DSM 15272]
 gi|311311951|gb|EFQ81872.1| ABC superfamily ATP binding cassette transporter permease protein
           [Aeromicrobium marinum DSM 15272]
          Length = 258

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 113/224 (50%), Gaps = 6/224 (2%)

Query: 146 SYKFKGFLLSLIRQMYY-VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204
            ++ + FLL    Q Y+ + V+ VP   L++   GAVIA Q    + QFGA+ F+     
Sbjct: 31  PFQMREFLL----QAYFTIRVTIVPTA-LVAIPFGAVIALQVGGLIKQFGAQSFTGSAAV 85

Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264
           +  +R  G + TA++IAG +GSAI A+ G+ KI EE+DA+  +G+D ++ L+ PR+ A++
Sbjct: 86  LAVVRNAGPIATALLIAGAAGSAIAADFGARKIREELDAMMVLGIDPIQRLVVPRVLAVM 145

Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI 324
           +    L  L  F  + G  +      D     + + F + A L +I  G++KA       
Sbjct: 146 LIAVFLNGLVTFVGVAGGYVFNVLLQDGTPGAYLASFTALAQLPDILQGMVKAVIFGFLA 205

Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
            IVA  +G         +G  V   VV +  ++  ++ + +  Y
Sbjct: 206 AIVASYKGMNAKGGPKGVGDAVNEAVVITFVLLFAVNFVVSALY 249


>gi|15828391|ref|NP_302654.1| hypothetical protein ML2587 [Mycobacterium leprae TN]
 gi|221230868|ref|YP_002504284.1| hypothetical protein MLBr_02587 [Mycobacterium leprae Br4923]
 gi|13093821|emb|CAC32119.1| conserved membrane protein [Mycobacterium leprae]
 gi|219933975|emb|CAR72687.1| conserved membrane protein [Mycobacterium leprae Br4923]
          Length = 267

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 12/200 (6%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P+ +L+ F    ++AQ  A  LS  GA I ++         ++G L T +++AG   ++
Sbjct: 68  IPLTVLLIFTLNVLLAQFSAADLSGAGAAIGAVT--------QLGPLTTVLVVAGAGSTS 119

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+  I EEIDA+  +G+D +  L+ PR+ A  +   LL  L     ++G  +   
Sbjct: 120 ICADLGARTIREEIDAMEVLGIDPIHRLVVPRVLAATLVATLLNGLVITVGLVGGYLFGV 179

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG---- 343
              ++    + +   +   L  +    +KA       G+V    G  V   SN LG    
Sbjct: 180 YLQNVSGGAYLATLTTITGLPEVVIATVKAATFGLIAGLVGCYRGLIVRGGSNGLGAAVN 239

Query: 344 KKVTTCVVQSISIVIIIDSL 363
           + V  CVV   ++ +++ ++
Sbjct: 240 ETVVLCVVALYAVNVVLTTI 259


>gi|282900961|ref|ZP_06308894.1| protein of unknown function DUF140 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281194052|gb|EFA69016.1| protein of unknown function DUF140 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 259

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 4/184 (2%)

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           VG   +  V+L+S   G +   Q A +L +FGA        ++   RE+  +LTA +IAG
Sbjct: 49  VGPGSLSPVLLVSGFAGMIFTIQTARELIRFGAVDNLGGAFAVAFCRELAPILTASVIAG 108

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           + GSA  AEIG+M++ E+IDA+  +  D +  L+ PR+ A  + +P++ I A    + G 
Sbjct: 109 QVGSAFAAEIGAMQVTEQIDALYLLKTDPIDYLVLPRVIACGLMMPVMMIFALIMGVSGG 168

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
                ++Y +    F        T  ++   ++K        GI+    G + G+ +   
Sbjct: 169 IFAGLQFYQVQPENFLESVRDFLTPGDMMMIIVK----GVIFGIIVAVNGCSWGLTTRGG 224

Query: 343 GKKV 346
            K+V
Sbjct: 225 AKEV 228


>gi|240170711|ref|ZP_04749370.1| hypothetical protein MkanA1_15455 [Mycobacterium kansasii ATCC
           12478]
          Length = 255

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 120/248 (48%), Gaps = 22/248 (8%)

Query: 136 ISNTGEFCASS-----------YKFKGFLLSLIRQMYYVG-VSGVPVVIL-ISFVTGAVI 182
           + + GEF A S           + ++ FLL    Q ++V  VS +P ++L I F    V 
Sbjct: 11  LRSVGEFFAMSLDTLVAMFKWPFPWREFLL----QSWFVARVSIIPTLLLAIPFTVLVVF 66

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
                  L +FGA  FS    +   + +IG ++T +++AG   +A+ A++G+  I++E+D
Sbjct: 67  TLN--ILLVEFGAADFSGTGAATASVTQIGPIVTVLVVAGTGATAMCADLGARTIHDELD 124

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA-SIVIWKYYDIPFAVFFSRF 301
           A+R MG+D +R L +PR+ A  +    L  L     + G+ +  ++  +  P A F +  
Sbjct: 125 ALRVMGVDPIRRLAAPRVLAATVVAVSLVSLVTLVGLAGSFAFSVFVQHVTPGA-FAAGL 183

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS-ISIVIII 360
                L  +  GL+K      A  ++A  +G +VG     +G  V   VV S I++ +I 
Sbjct: 184 TLITHLPELILGLVKGALFGMAAALIACYKGISVGGGPQGVGNAVNETVVYSFIALFVIN 243

Query: 361 DSLFAIFY 368
               A+FY
Sbjct: 244 IVATAVFY 251


>gi|295690359|ref|YP_003594052.1| hypothetical protein Cseg_2991 [Caulobacter segnis ATCC 21756]
 gi|295432262|gb|ADG11434.1| protein of unknown function DUF140 [Caulobacter segnis ATCC 21756]
          Length = 266

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 61/104 (58%), Gaps = 10/104 (9%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQ-----GAFQLSQFGAEIFSIDLMSILQLREIG 212
           RQ+  +G   +PVV L +  TGA +A       G    +Q   +I ++ +      RE+G
Sbjct: 52  RQLTTIGFFSLPVVALTALFTGAALALNIHIGGGRLNAAQAMPQIVALGIT-----RELG 106

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILI 256
            +L A+M+AGR  +AI AEIG+M+  E++DA+RT+  D +R L+
Sbjct: 107 PVLAALMLAGRVSAAIAAEIGAMRATEQLDAMRTLSTDPIRYLV 150


>gi|327402880|ref|YP_004343718.1| hypothetical protein Fluta_0879 [Fluviicola taffensis DSM 16823]
 gi|327318388|gb|AEA42880.1| protein of unknown function DUF140 [Fluviicola taffensis DSM 16823]
          Length = 246

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 85/156 (54%), Gaps = 8/156 (5%)

Query: 135 VISNTGEFCASSY-------KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
           +I N G++    Y       K++ F      +M  +G+  +P+V L+S   GAVIA Q A
Sbjct: 3   IIQNIGKYFMMMYIVFSKPEKWRIFRRRFFEEMEIIGIKSIPIVALMSAFMGAVIALQTA 62

Query: 188 FQLSQFGAEIFSIDLMSILQ-LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
             +       +++  ++    + E    + ++++AG+ GS I +E+G+M++ E+IDA+  
Sbjct: 63  SNMDNPLLPAYTVGFITRSSTILEFSPTIISLILAGKVGSNIASEVGTMRVTEQIDALEI 122

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           MG++ +  L+ P++ + +I  P+L I +   ++IG 
Sbjct: 123 MGVNSLSYLVLPKVTSAMIFFPILIIFSIGLSLIGG 158


>gi|271964523|ref|YP_003338719.1| resistance to organic solvents ABC transporter permease
           [Streptosporangium roseum DSM 43021]
 gi|270507698|gb|ACZ85976.1| ABC-type transport system involved in resistance to organic
           solvents permease component-like protein
           [Streptosporangium roseum DSM 43021]
          Length = 288

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 92/189 (48%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V   ++F  GA +  QG   L   GAE F   + S   +REI  ++ AV +A + GS+  
Sbjct: 79  VAFTMAFAVGATVGLQGYQGLQAIGAESFIGLVGSFANVREITPIIAAVALAAQVGSSFT 138

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AE+G+M+I+EEIDA+  M ++    LI  R+ A +I+L  + ++A F++     ++    
Sbjct: 139 AELGAMRISEEIDALEVMAINAFTYLICTRVVAALIALVPVYLIALFASFFATRLMCTVL 198

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
           + +   V+   F+    L +I   +IK    A A+  +    GF        +G      
Sbjct: 199 FGMSPGVYDYYFYLGLPLIDIVYSVIKVIVFAFAVISIHCYYGFNATGGPVGVGTAAGRA 258

Query: 350 VVQSISIVI 358
           + QSI  VI
Sbjct: 259 IRQSIVTVI 267


>gi|88803715|ref|ZP_01119239.1| hypothetical protein PI23P_00445 [Polaribacter irgensii 23-P]
 gi|88780448|gb|EAR11629.1| hypothetical protein PI23P_00445 [Polaribacter irgensii 23-P]
          Length = 246

 Score = 66.2 bits (160), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 7/139 (5%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           KF  F  +L++++  +G+  + +++ ISF  G VIA Q A  L    +      L+    
Sbjct: 23  KFHIFYTALMKEIEDLGLKSIGIIMFISFFIGGVIALQTALNLD---SPFIPDSLIGFAA 79

Query: 208 LR----EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263
            R    E       +++AG+ GS I + IG+M++ E+IDA+  MG++ +  L+ P+I A 
Sbjct: 80  KRSIILEFAPTFCCIILAGKVGSYITSSIGAMRVTEQIDALEVMGINALNFLVLPKILAA 139

Query: 264 IISLPLLTILANFSAIIGA 282
           +   P L ILA    I G 
Sbjct: 140 LFFYPFLIILAMVLGIFGG 158


>gi|269958397|ref|YP_003328184.1| putative ABC transporter [Anaplasma centrale str. Israel]
 gi|269848226|gb|ACZ48870.1| putative ABC transporter [Anaplasma centrale str. Israel]
          Length = 259

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 122/252 (48%), Gaps = 20/252 (7%)

Query: 130 HILGLVI--SNTGEFCASSYKFKGFLLSLI-----RQMYYVGVSGVPVVILISFVTGAVI 182
           + +GL+I       FCA S   +G L         RQ + +    +P+V + +  TG  +
Sbjct: 14  YFIGLIIPVGRMSVFCAQS-VMRGILPPYYFPIAARQFFEMWFFSLPIVGMTALFTGGAL 72

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
             Q         A  F   ++++  +RE+G +L  +++AGR G+A+ AEIG+M+I E+ID
Sbjct: 73  VLQDTLVGGGKVAAHFMAGIVTVATVRELGPVLIGLIVAGRVGAAVAAEIGTMRITEQID 132

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV--IWKYYD----IPFAV 296
           A+ T+  +  + L+ PR+ AL+I++P+L +  +F  I G   V  +   YD    +    
Sbjct: 133 ALDTLEANPFQYLVMPRVIALMIAMPVLIVYTDFLGIFGGYAVGTLGLGYDSNEYLGGVA 192

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
            F  F   A       GL+KA      I +V    G+     +  +G   T  VV S  +
Sbjct: 193 EFLHFKDVA------EGLVKAVSFGFVISLVGCYSGYYCSGGARGVGVATTNTVVASSML 246

Query: 357 VIIIDSLFAIFY 368
           +++++ +  +FY
Sbjct: 247 IVLLNYVITVFY 258


>gi|296141463|ref|YP_003648706.1| hypothetical protein Tpau_3789 [Tsukamurella paurometabola DSM
           20162]
 gi|296029597|gb|ADG80367.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM
           20162]
          Length = 272

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 98/187 (52%), Gaps = 2/187 (1%)

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
           IL++   GAV++ Q    +   GA         I  +R+   L T V++ G   SAI A+
Sbjct: 67  ILVAVPFGAVVSVQVGALVDTVGANSLVGAASGIGIIRQGAPLATGVLLGGVCASAIAAD 126

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI-LANFSAIIGASIVIWKYY 290
           +GS  + EE+ A++ MG+D +  LI+PR+ AL+I  P+L + +   + ++  ++ +W+ +
Sbjct: 127 LGSRTVREELQAMQVMGVDPIARLIAPRMLALMIIAPMLLVAIVAVAMMVALTVSVWQ-F 185

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
            +    F+S F + +  +++   ++KA   A  +G+VA   G         +   V + V
Sbjct: 186 GLSSGGFWSSFGAFSAPSDLAFAVLKAETGAMIVGLVAGLRGLEASGGPRGVADGVNSSV 245

Query: 351 VQSISIV 357
           V SI+++
Sbjct: 246 VLSITLI 252


>gi|260203312|ref|ZP_05770803.1| hypothetical protein MtubK8_03235 [Mycobacterium tuberculosis K85]
 gi|289572747|ref|ZP_06452974.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis K85]
 gi|289537178|gb|EFD41756.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis K85]
          Length = 265

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 97/208 (46%), Gaps = 32/208 (15%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P+ +L+ F    ++AQ GA  +S  GA I ++         ++G L T +++AG   +A
Sbjct: 66  IPLTVLLIFTLNILLAQFGAADISGSGAAIGAVT--------QLGPLTTVLVVAGAGSTA 117

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+  I EEIDA+  +G+D +  L+ PR+ A ++   LL  L     ++G  +   
Sbjct: 118 ICADLGARTIREEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNSLVITVGLVGGFL--- 174

Query: 288 KYYDIPFAVFFSRFHSTATLA--NIFTGL-------IKAPFMACAIGIVAMKEGFAVGVH 338
                 F V+       A LA   + TGL       IKA       G+V    G  V   
Sbjct: 175 ------FGVYLQNVSGGAYLATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGG 228

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           S  LG  V        ++V+ + +LFA+
Sbjct: 229 SKGLGTAVNE------TVVLCVIALFAV 250


>gi|120401386|ref|YP_951215.1| hypothetical protein Mvan_0361 [Mycobacterium vanbaalenii PYR-1]
 gi|119954204|gb|ABM11209.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 256

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 86/172 (50%)

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L +FGA  F+    +I  + +IG ++T ++++G   +A+ A++G+  I EE+DA++ MG+
Sbjct: 72  LKEFGAADFAGTGAAIGTVSQIGPIVTVLVVSGAGATAMCADLGARTIREELDAMKVMGI 131

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
           + ++ L+ PR+ A       L+     + + GA        ++    F S        A+
Sbjct: 132 NPIQALVVPRVLAATTVALALSATVIIAGLAGAFFFCVFVQNVSAGAFISGMTLLTGAAD 191

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           +F  L KA     A G++A  +G +VG     +G  V   VV +  ++  I+
Sbjct: 192 VFVSLAKATLFGLAAGLIACYKGISVGGGPAGVGNAVNETVVFTFMVLFAIN 243


>gi|300783703|ref|YP_003763994.1| ABC transporter permease [Amycolatopsis mediterranei U32]
 gi|299793217|gb|ADJ43592.1| ABC transport system permease protein [Amycolatopsis mediterranei
           U32]
          Length = 264

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 4/198 (2%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           LI+Q +++    +    L+S   GAVIA       +Q GA+ F+     +  +++   ++
Sbjct: 43  LIQQFWFIASVSILPTALVSIPFGAVIALHIGSLTTQIGAQSFTGAASVLAIIQQASPIV 102

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++IAG  GSA+ A++GS  I EEIDA+  +G+  V+ LI PR+ A +     L  + +
Sbjct: 103 TALLIAGAGGSAMCADLGSRTIREEIDAMEVLGVSPVQRLIVPRVLAAMGVAVFLNGMVS 162

Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
              ++G     VI + +  P A + + F + A L +++   IKA       G+VA   G 
Sbjct: 163 VVGVLGGYFFNVIMQ-HGTPGA-YLASFSALAQLPDLWISEIKALIFGFVAGVVASYRGL 220

Query: 334 AVGVHSNSLGKKVTTCVV 351
                   +G  V   VV
Sbjct: 221 NPKGGPKGVGDAVNQSVV 238


>gi|118462658|ref|YP_881590.1| hypothetical protein MAV_2390 [Mycobacterium avium 104]
 gi|118163945|gb|ABK64842.1| conserved hypothetical protein [Mycobacterium avium 104]
          Length = 286

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 100/212 (47%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +RQ  ++  + V   IL+S      ++ Q A    Q GA   +     +  +R+   L+ 
Sbjct: 66  VRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGATSLAGAASGLAVIRQGASLVA 125

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV++A   GSAI A++GS  + EE DA+  MG+  VR L+ PR  A ++    LT +  F
Sbjct: 126 AVLMASAVGSAITADLGSRTMREETDAMEVMGVSVVRRLVVPRFAAAVMIGVALTGVVCF 185

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           +    + +    + +     F S   S AT  ++   L+KA      + IV+ ++G +  
Sbjct: 186 AGFFASYMFNVYFQNGAPGSFVSTSASFATTGDMILALLKAIVFGAIVAIVSSQKGLSTK 245

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
                +   V   VV++I +++I++   +  Y
Sbjct: 246 GGPTGVANSVNAAVVEAILLLMIVNVAISQLY 277


>gi|326331738|ref|ZP_08198026.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1]
 gi|325950537|gb|EGD42589.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1]
          Length = 257

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 114/234 (48%), Gaps = 2/234 (0%)

Query: 139 TGEFCASSYKFKGFLLSLIRQMYYV-GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
           TGE    ++  K  L   + Q +++  V+ +P V L+S   GAVI+ Q      Q GA+ 
Sbjct: 19  TGEVVKGTFTTKFQLREFLEQAWFITSVTMMPAV-LVSIPFGAVISLQVGNLAGQLGAQS 77

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
           F+     +  +RE   +  A++IAG +GSAI +++GS KI EEIDA+  +G+D V  L+ 
Sbjct: 78  FAGATAVLAVVREAAPMAAALIIAGAAGSAICSDMGSRKIREEIDAMEVLGIDPVVRLVI 137

Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
           PR+ A +    ++  +   + I G               F S F + A+L +++  ++K+
Sbjct: 138 PRVLACLFVSVMINGIVIATGIGGGYFFTVIVQGGSAGAFLSSFTALASLPDLYISMVKS 197

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
                   I+    G       + +G+ V   V+ +  ++ +++S+    YF I
Sbjct: 198 ALFGFLAAIIGAYNGLNAQGGPSGVGRAVNEAVIIAFMMLFVLNSIMTAVYFQI 251


>gi|15607308|ref|NP_214681.1| integral membrane protein YRBE1A [Mycobacterium tuberculosis H37Rv]
 gi|15839545|ref|NP_334582.1| hypothetical protein MT0176 [Mycobacterium tuberculosis CDC1551]
 gi|31791345|ref|NP_853838.1| integral membrane protein YRBE1A [Mycobacterium bovis AF2122/97]
 gi|121636079|ref|YP_976302.1| integral membrane protein YrbE1a [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148659931|ref|YP_001281454.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis H37Ra]
 gi|148821359|ref|YP_001286113.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis F11]
 gi|167970287|ref|ZP_02552564.1| hypothetical integral membrane protein yrbE1A [Mycobacterium
           tuberculosis H37Ra]
 gi|215406160|ref|ZP_03418341.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis
           02_1987]
 gi|215414032|ref|ZP_03422691.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis
           94_M4241A]
 gi|215448446|ref|ZP_03435198.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis T85]
 gi|218755901|ref|ZP_03534697.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis GM
           1503]
 gi|224988552|ref|YP_002643239.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253797089|ref|YP_003030090.1| hypothetical protein TBMG_00168 [Mycobacterium tuberculosis KZN
           1435]
 gi|254233556|ref|ZP_04926882.1| hypothetical integral membrane protein yrbE1A [Mycobacterium
           tuberculosis C]
 gi|254366619|ref|ZP_04982663.1| hypothetical integral membrane protein yrbE1A [Mycobacterium
           tuberculosis str. Haarlem]
 gi|254549106|ref|ZP_05139553.1| hypothetical protein Mtube_01351 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260185030|ref|ZP_05762504.1| hypothetical protein MtubCP_03112 [Mycobacterium tuberculosis
           CPHL_A]
 gi|289445698|ref|ZP_06435442.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           CPHL_A]
 gi|289552419|ref|ZP_06441629.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           KZN 605]
 gi|289747934|ref|ZP_06507312.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis
           02_1987]
 gi|289760269|ref|ZP_06519647.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|289764283|ref|ZP_06523661.1| hypothetical integral membrane protein yrbE1A [Mycobacterium
           tuberculosis GM 1503]
 gi|294994641|ref|ZP_06800332.1| hypothetical protein Mtub2_09017 [Mycobacterium tuberculosis 210]
 gi|297632645|ref|ZP_06950425.1| hypothetical protein MtubK4_00901 [Mycobacterium tuberculosis KZN
           4207]
 gi|297729620|ref|ZP_06958738.1| hypothetical protein MtubKR_00931 [Mycobacterium tuberculosis KZN
           R506]
 gi|298527559|ref|ZP_07014968.1| YrbE1A [Mycobacterium tuberculosis 94_M4241A]
 gi|306774257|ref|ZP_07412594.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu001]
 gi|306779001|ref|ZP_07417338.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu002]
 gi|306782789|ref|ZP_07421111.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu003]
 gi|306787156|ref|ZP_07425478.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu004]
 gi|306791712|ref|ZP_07430014.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu005]
 gi|306795756|ref|ZP_07434058.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu006]
 gi|306801752|ref|ZP_07438420.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu008]
 gi|306805963|ref|ZP_07442631.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu007]
 gi|306970359|ref|ZP_07483020.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu009]
 gi|306974591|ref|ZP_07487252.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu010]
 gi|307082300|ref|ZP_07491470.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu011]
 gi|307082645|ref|ZP_07491758.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu012]
 gi|313656946|ref|ZP_07813826.1| hypothetical protein MtubKV_00916 [Mycobacterium tuberculosis KZN
           V2475]
 gi|2213504|emb|CAB09750.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE1A
           [Mycobacterium tuberculosis H37Rv]
 gi|13879657|gb|AAK44396.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|31616930|emb|CAD93037.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE1A
           [Mycobacterium bovis AF2122/97]
 gi|110348076|gb|ABG72765.1| YrbE1A [Expression vector yrbE1AB]
 gi|121491726|emb|CAL70188.1| Conserved hypothetical integral membrane protein yrbE1A
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124603349|gb|EAY61624.1| hypothetical integral membrane protein yrbE1A [Mycobacterium
           tuberculosis C]
 gi|134152131|gb|EBA44176.1| hypothetical integral membrane protein yrbE1A [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148504083|gb|ABQ71892.1| conserved hypothetical integral membrane protein YrbE1a
           [Mycobacterium tuberculosis H37Ra]
 gi|148719886|gb|ABR04511.1| hypothetical integral membrane protein yrbE1A [Mycobacterium
           tuberculosis F11]
 gi|224771665|dbj|BAH24471.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253318592|gb|ACT23195.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           KZN 1435]
 gi|289418656|gb|EFD15857.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           CPHL_A]
 gi|289437051|gb|EFD19544.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           KZN 605]
 gi|289688462|gb|EFD55950.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis
           02_1987]
 gi|289711789|gb|EFD75805.1| hypothetical integral membrane protein yrbE1A [Mycobacterium
           tuberculosis GM 1503]
 gi|289715833|gb|EFD79845.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|298497353|gb|EFI32647.1| YrbE1A [Mycobacterium tuberculosis 94_M4241A]
 gi|308217091|gb|EFO76490.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu001]
 gi|308328029|gb|EFP16880.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu002]
 gi|308332309|gb|EFP21160.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu003]
 gi|308336191|gb|EFP25042.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu004]
 gi|308339691|gb|EFP28542.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu005]
 gi|308343698|gb|EFP32549.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu006]
 gi|308347571|gb|EFP36422.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu007]
 gi|308351470|gb|EFP40321.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu008]
 gi|308352197|gb|EFP41048.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu009]
 gi|308356146|gb|EFP44997.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu010]
 gi|308360101|gb|EFP48952.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu011]
 gi|308367649|gb|EFP56500.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu012]
 gi|323717156|gb|EGB26365.1| hypothetical protein TMMG_00596 [Mycobacterium tuberculosis
           CDC1551A]
 gi|326905924|gb|EGE52857.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           W-148]
 gi|328456876|gb|AEB02299.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           KZN 4207]
 gi|328864228|gb|AEB53197.1| conserved integral membrane protein YRBE1A [Mycobacterium
           tuberculosis]
          Length = 265

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 97/208 (46%), Gaps = 32/208 (15%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P+ +L+ F    ++AQ GA  +S  GA I ++         ++G L T +++AG   +A
Sbjct: 66  IPLTVLLIFTLNILLAQFGAADISGSGAAIGAVT--------QLGPLTTVLVVAGAGSTA 117

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+  I EEIDA+  +G+D +  L+ PR+ A ++   LL  L     ++G  +   
Sbjct: 118 ICADLGARTIREEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFL--- 174

Query: 288 KYYDIPFAVFFSRFHSTATLA--NIFTGL-------IKAPFMACAIGIVAMKEGFAVGVH 338
                 F V+       A LA   + TGL       IKA       G+V    G  V   
Sbjct: 175 ------FGVYLQNVSGGAYLATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGG 228

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           S  LG  V        ++V+ + +LFA+
Sbjct: 229 SKGLGTAVNE------TVVLCVIALFAV 250


>gi|215425374|ref|ZP_03423293.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis T92]
 gi|215433087|ref|ZP_03431006.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis
           EAS054]
 gi|219555965|ref|ZP_03535041.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis T17]
 gi|260199170|ref|ZP_05766661.1| hypothetical protein MtubT4_03250 [Mycobacterium tuberculosis T46]
 gi|289441542|ref|ZP_06431286.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           T46]
 gi|289568066|ref|ZP_06448293.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           T17]
 gi|289748643|ref|ZP_06508021.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           T92]
 gi|289756232|ref|ZP_06515610.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
 gi|289414461|gb|EFD11701.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           T46]
 gi|289541819|gb|EFD45468.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           T17]
 gi|289689230|gb|EFD56659.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           T92]
 gi|289696819|gb|EFD64248.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
          Length = 265

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 97/208 (46%), Gaps = 32/208 (15%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P+ +L+ F    ++AQ GA  +S  GA I ++         ++G L T +++AG   +A
Sbjct: 66  IPLTVLLIFTLNILLAQFGAADISGSGAAIGAVT--------QLGPLTTVLVVAGAGSTA 117

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+  I EEIDA+  +G+D +  L+ PR+ A ++   LL  L     ++G  +   
Sbjct: 118 ICADLGARTIREEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFL--- 174

Query: 288 KYYDIPFAVFFSRFHSTATLA--NIFTGL-------IKAPFMACAIGIVAMKEGFAVGVH 338
                 F V+       A LA   + TGL       IKA       G+V    G  V   
Sbjct: 175 ------FGVYLQNVSGGAYLATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGG 228

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           S  LG  V        ++V+ + +LFA+
Sbjct: 229 SKGLGTAVNE------TVVLCVIALFAV 250


>gi|325954854|ref|YP_004238514.1| hypothetical protein Weevi_1232 [Weeksella virosa DSM 16922]
 gi|323437472|gb|ADX67936.1| protein of unknown function DUF140 [Weeksella virosa DSM 16922]
          Length = 250

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 17/216 (7%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDL----- 202
           KFK F   +IR++  +G+S + +V  IS   GAV+A Q A      G+EI   D      
Sbjct: 25  KFKYFWKLIIREVMDLGMSSLGIVTFISTFMGAVVAIQMAQNFR--GSEIPVPDAYIGYA 82

Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
             ++ + E    + ++++AG+ GS I + IG+M++ E+IDA+  MG++    LI P+I A
Sbjct: 83  TKVVLVLEFSPTIVSLILAGKVGSYIASSIGTMRVTEQIDALDVMGINSPNFLILPKIIA 142

Query: 263 LIISLPLLTILANFSAIIGASIV-----IWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
            +   P L  ++    I+G  ++     +W   D     F         L        K 
Sbjct: 143 CVFFFPFLIAISIGFGILGGHLIGVFTKMWAPVD-----FVQGLQMGMALKFYIYTFFKT 197

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              A  I  V    G+ V   S  +G+  TT VV +
Sbjct: 198 MVFAFVIATVPAYYGYYVSGGSLEVGRSSTTAVVWT 233


>gi|289642564|ref|ZP_06474707.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
 gi|289507652|gb|EFD28608.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
          Length = 285

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 93/192 (48%), Gaps = 2/192 (1%)

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           A I+ +G + L Q GA  ++    ++     +   +   ++A + G  +VAE+GSM+I+E
Sbjct: 86  AEISLEGHYLLRQLGAGGYTAVFTAVSDY-TVAPEMWGWILAAKVGCGLVAELGSMRISE 144

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILA-NFSAIIGASIVIWKYYDIPFAVFF 298
           EIDA+  MGLD +  L+S R+ A+II  P + I       I+   + +  ++ +    + 
Sbjct: 145 EIDALEVMGLDSMSYLVSARLLAVIIVTPFMFIAGTGIMYIVNYVLNVHVFHSVTQGAYL 204

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           S F +  T  ++   L+    M   I ++    G+        +GK     +V ++ IV 
Sbjct: 205 SVFWTFLTQTDVLLSLVAGGIMGTMIVLIGCFYGYTASGGPVGVGKNTAKSMVINLIIVS 264

Query: 359 IIDSLFAIFYFA 370
           ++ ++F   +F 
Sbjct: 265 VVGAIFQQLFFG 276


>gi|145222687|ref|YP_001133365.1| hypothetical protein Mflv_2099 [Mycobacterium gilvum PYR-GCK]
 gi|315443151|ref|YP_004076030.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|145215173|gb|ABP44577.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
 gi|315261454|gb|ADT98195.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 255

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 82/162 (50%)

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L++FGA  FS    ++  +R+IG ++T +++AG   +A+ A++G+  I EE+DA+R MG+
Sbjct: 72  LTEFGAADFSGTGAALGTVRQIGPIVTVLVVAGAGATAMCADLGARTIREELDALRVMGV 131

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
           + ++ L+ PR+ A  +    L+       + GA        ++    F +         +
Sbjct: 132 NPIQALVVPRVLAATLVSLALSATVILVGLAGAYFFCVYIQNVSPGAFAAGLTLIIGATD 191

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
           +   L+KA     + G++A  +G +VG     +G  V   VV
Sbjct: 192 VIIALVKAALFGLSAGMIACYKGISVGGGPAGVGNAVNETVV 233


>gi|302523958|ref|ZP_07276300.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4]
 gi|302432853|gb|EFL04669.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4]
          Length = 262

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 111/218 (50%), Gaps = 14/218 (6%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
            ++F+ F    I+Q ++V    +    L++   GAVI+ Q      Q GA+ ++     +
Sbjct: 35  PFQFREF----IQQAWFVASVTILPTALVAIPFGAVISLQFGALARQLGAQSYTGAGSVL 90

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
             +++   L+TA+++AG  GSA+ A+IG+  I EEIDA+  +G+  V+ LI PR  A+++
Sbjct: 91  ATVQQASPLVTALLVAGAGGSAVCADIGARTIREEIDAMEVLGVSAVQRLIVPRTLAMML 150

Query: 266 SLPLLTILANFSAIIGA---SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322
              LL  + +   ++G    ++V+      P A + S F + A L +++ G IKA     
Sbjct: 151 VALLLNGMVSVIGVLGGYFFNVVLQG--GTPGA-YLSSFSALAQLPDLWVGEIKALIFGF 207

Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
              +VA       G+H +   K V   V QS+ I  ++
Sbjct: 208 IAAVVAAYR----GLHPSGGPKGVGDAVNQSVVITFLL 241


>gi|223937195|ref|ZP_03629102.1| protein of unknown function DUF140 [bacterium Ellin514]
 gi|223894217|gb|EEF60671.1| protein of unknown function DUF140 [bacterium Ellin514]
          Length = 311

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/211 (22%), Positives = 101/211 (47%), Gaps = 5/211 (2%)

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           GV  +P+ + +S   G V+  Q    L++  A  +   +M ++ +REIG +LTA+++  R
Sbjct: 103 GVKLLPMFLFLSLAMGLVVIGQAVSWLTRVNAVQYLGTIMVLVVVREIGPMLTALLVLAR 162

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           +G++ V E+G+ +   E++A+  + +D +  L+ PR+  + I +  LT+     +++  S
Sbjct: 163 AGTSNVIELGTARALGEVEALEALVIDPIHYLVMPRVIGMAIGVFSLTVYFILGSLL--S 220

Query: 284 IVIWKYY-DIPFAV--FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
             +W +  D+P     +F +     +  +      K+      I ++    G A  +   
Sbjct: 221 GYMWAFLQDVPLRPTDYFEQLAGALSYTDFIVLGTKSILFGVIISVITCYHGLAQPLQLE 280

Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
            +       V QS+   + +D+LF + Y  +
Sbjct: 281 EVSNATVRAVAQSVIACVALDALFIVIYLVL 311


>gi|120404938|ref|YP_954767.1| hypothetical protein Mvan_3984 [Mycobacterium vanbaalenii PYR-1]
 gi|119957756|gb|ABM14761.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 257

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 84/172 (48%)

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L++FGA  FS    +I  + +IG ++T ++++G   +A+ A++G+  I +E+DA+R MG+
Sbjct: 73  LNEFGASDFSGTGAAIGTVNQIGPIVTVLVVSGAGATAMCADLGARTIRDELDALRVMGI 132

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
           + V+ L+ PR+ A       L+       + GA +       +    F S         +
Sbjct: 133 NPVQALVVPRVLAATTVALALSASVIIVGLAGAFLFCVYVQHVSAGAFISGLTLLTGAGD 192

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           +   LIKA     A G++A  +G  VG     +G  V   VV +  ++  I+
Sbjct: 193 VVVSLIKATLFGAAAGLIACYKGVYVGGGPAGVGNAVNETVVFTFMVLFAIN 244


>gi|189502390|ref|YP_001958107.1| hypothetical protein Aasi_1030 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497831|gb|ACE06378.1| hypothetical protein Aasi_1030 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 229

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 74/135 (54%), Gaps = 7/135 (5%)

Query: 149 FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEI---FSIDLMS 204
           +K +    I +   +G+  + +V ++S   GAV   Q ++ L S F  +    F +  M 
Sbjct: 8   WKTYFQQTIDECINIGICSITIVSIVSIFIGAVTCIQISYNLKSPFAQDFLVGFGVRNMV 67

Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264
           IL+L      + A++ AG+ GS I +++GSM+I E+IDA+  MG++    L+ P+I A I
Sbjct: 68  ILELAPT---VMAIIFAGKVGSNIASQLGSMRITEQIDALEVMGINPTTYLVLPKIIASI 124

Query: 265 ISLPLLTILANFSAI 279
              PLL IL+   AI
Sbjct: 125 FMYPLLVILSGSLAI 139


>gi|296163926|ref|ZP_06846562.1| integral membrane protein YrbE2a [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295900707|gb|EFG80077.1| integral membrane protein YrbE2a [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 243

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 110/235 (46%), Gaps = 24/235 (10%)

Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVS-------GVPVVILISFVTGAVIAQQGAFQLS 191
           TG+  A  ++++ F+L   +  + +GVS        +P+ +LI F    ++A+ GA  +S
Sbjct: 11  TGKALARPFQWREFIL---QGWFLLGVSFLPTVMVAIPLTVLIIFTLNILLAEFGAADVS 67

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
             GA + ++         ++G L+T +++AG   +AI A++G+  I EEIDA+  +G+D 
Sbjct: 68  GAGAALGAVT--------QLGPLVTVLVVAGAGSTAICADLGARTIREEIDAMEVLGIDP 119

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           +  L+ PR+ A  I   LL        ++G  +      ++    + S       L  + 
Sbjct: 120 IHRLVVPRVVASTIVALLLNGAVISIGLVGGFLFGVYIQNVSAGAYVSTLTLITGLPEVL 179

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
             ++KA       G+V    G   G  +  +G  V        ++V+ + +LFA+
Sbjct: 180 ISIVKATLFGLIAGLVGCYRGLTAGGGAKGVGTAVNE------TLVLAVVALFAV 228


>gi|300789441|ref|YP_003769732.1| ABC transporter permease [Amycolatopsis mediterranei U32]
 gi|299798955|gb|ADJ49330.1| ABC transport system permease protein [Amycolatopsis mediterranei
           U32]
          Length = 264

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 108/227 (47%), Gaps = 10/227 (4%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
            Y+ + F+L    Q +++    +   IL+S   GAVI+ Q     SQ GA+ F+     +
Sbjct: 37  PYQVREFVL----QFWFIASVSITPAILVSIPFGAVISLQLGSLTSQIGAQQFNGAASVL 92

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
             +++   ++T ++IAG  GSAI A++G+  I EEI A+  +G+  +  L+ PR+ A + 
Sbjct: 93  AVVQQASPIVTTLIIAGAGGSAICADLGARSIREEIAAMEVLGVSPIHRLVVPRVQAAVG 152

Query: 266 SLPLLTILANFSAIIGA---SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322
              LL  L +   ++G     ++I      P A + + F++ A L ++    IKA     
Sbjct: 153 VSVLLNGLVSVVGVLGGYFFGVIIQG--GTPGA-YLASFNALAQLPDLVVSSIKAVIFGY 209

Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
             G+VA   G         +G  V   VV +  ++  ++++    Y 
Sbjct: 210 LAGVVAAYRGLNPKGGPKGVGDVVNQSVVITFLLLFFVNTVLTALYL 256


>gi|229494293|ref|ZP_04388056.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
 gi|229318655|gb|EEN84513.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
          Length = 281

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 6/201 (2%)

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G   V V+  ISF  G+ I  +G   L+  G    S  + +I   RE+  L+ A+ +A +
Sbjct: 65  GGGSVVVIFAISFFAGSQIGLEGYRGLNLVGLAPLSGVMSAIANTREVAPLVAAITLAAK 124

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR-IWALIISLP--LLTILANFSAII 280
            G+   A++G+M+I+EEIDA+  M +  +R L++ R I ALI  +P  L+ + A++ A  
Sbjct: 125 VGTGFTAQLGAMRISEEIDALEVMAIPSLRYLVTTRMIAALIAVVPLYLVGLFASYMATA 184

Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
            A I +    +  +  +FS F S     +I+  LIK    A  + +V    G+       
Sbjct: 185 LAVIRVKGQSEGTYGYYFSLFLSP---NDIWLSLIKVMVFAVVVTLVHCYYGYTATGGPE 241

Query: 341 SLGKKVTTCVVQSISIVIIID 361
            +G+     +  SI  +   D
Sbjct: 242 GVGRAAGRALRTSIVFLAFTD 262


>gi|291515429|emb|CBK64639.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Alistipes shahii WAL 8301]
          Length = 247

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 15/214 (7%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSILQLREIGVL 214
           +I +M  +GV+ + +  +IS   GAVI  Q    L S F              + E    
Sbjct: 32  IIFEMESLGVNSIGLTAIISVFIGAVITLQMCINLDSPFIPRSLVGYATRETMILEFSSA 91

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           + A+++AG+ GS+I +EIG+M+I E+IDA+  MG++    LI P+I A ++  P LTIL+
Sbjct: 92  VVALILAGKVGSSIASEIGTMRITEQIDALEIMGVNSASYLILPKIVAAMVFFPFLTILS 151

Query: 275 NFSAIIGA-------SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327
               I+G         I+I   Y     + F  +  T T       LIK  F A  I  +
Sbjct: 152 ILIGILGGYLIAAATGIMIPADYVDGLLMDFKPYSITYT-------LIKTVFFAYIITSI 204

Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           +   G+    +S  +G   T  VV S  ++++ D
Sbjct: 205 SAFYGYNARGNSLEVGTASTRAVVASCVVILLFD 238


>gi|326330431|ref|ZP_08196739.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1]
 gi|325951706|gb|EGD43738.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1]
          Length = 256

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 2/156 (1%)

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            LREI    T + +AG  G+A+ A++G+ KI EE+DA   +G+D +R L+ PR+ A+ + 
Sbjct: 84  SLREISPFATGMAVAGVMGTAMTADLGARKIREELDAFTVLGIDAIRTLVLPRVIAITVM 143

Query: 267 LPLLTILANFSAIIGASI-VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325
           +    I+ +   +  A I   W     P A F      + T+  +    +K   +   IG
Sbjct: 144 MVAFNIVGSLLGMSMAMISATWLGTTSPGA-FLGNLLGSMTVPELVGTTVKCTLIGLFIG 202

Query: 326 IVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           +V+ ++G      +  +G+ V   VV S + V + +
Sbjct: 203 VVSAQKGLNAKGGAEGVGRAVNEAVVLSFAAVWVAN 238


>gi|226361938|ref|YP_002779716.1| YrbE family protein [Rhodococcus opacus B4]
 gi|226240423|dbj|BAH50771.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 267

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 8/184 (4%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L+ F    ++ + GA  LS  GA + ++         +IG L+T +++AG   +A
Sbjct: 68  LPFTVLVVFTLNILLVEFGAADLSGAGAGLGAVT--------QIGPLVTVLIVAGAGATA 119

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+  I EEIDAIR +G+D ++ L+ PR+ A +    LL  L     + G  +   
Sbjct: 120 ICADLGARTIREEIDAIRVLGIDPIQRLVVPRVLASMFVAVLLNGLVITIGLTGGFLFSV 179

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
              ++    + S       L  +    +KA       G+VA   G  V     S+G  V 
Sbjct: 180 YIQNVTPGAYVSSLTFVTGLPEVIISEVKATLFGLIAGLVACHRGLTVKGGPKSVGDAVN 239

Query: 348 TCVV 351
             VV
Sbjct: 240 ETVV 243


>gi|226304167|ref|YP_002764125.1| YrbE family protein [Rhodococcus erythropolis PR4]
 gi|226183282|dbj|BAH31386.1| putative YrbE family protein [Rhodococcus erythropolis PR4]
          Length = 281

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 6/201 (2%)

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G   V V+  ISF  G+ I  +G   L+  G    S  + +I   RE+  L+ A+ +A +
Sbjct: 65  GGGSVVVIFAISFFAGSQIGLEGYRGLNLVGLAPLSGVMSAIANTREVAPLVAAITLAAK 124

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR-IWALIISLP--LLTILANFSAII 280
            G+   A++G+M+I+EEIDA+  M +  +R L++ R I ALI  +P  L+ + A++ A  
Sbjct: 125 VGTGFTAQLGAMRISEEIDALEVMAIPSLRYLVTTRMIAALIAVVPLYLVGLFASYMATA 184

Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
            A I +    +  +  +FS F S     +I+  LIK    A  + +V    G+       
Sbjct: 185 LAVIRVKGQSEGTYGYYFSLFLSP---NDIWLSLIKVMVFAVVVTLVHCYYGYTATGGPE 241

Query: 341 SLGKKVTTCVVQSISIVIIID 361
            +G+     +  SI  +   D
Sbjct: 242 GVGRAAGRALRTSIVFLAFTD 262


>gi|298372676|ref|ZP_06982666.1| membrane protein [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275580|gb|EFI17131.1| membrane protein [Bacteroidetes oral taxon 274 str. F0058]
          Length = 248

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 73/136 (53%), Gaps = 1/136 (0%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDL-MSIL 206
            ++ F   L  ++  +G++ V +++LIS   G ++  Q            +S  L +   
Sbjct: 25  NWRVFWRQLPSEIEKLGINTVGIIVLISIFMGVIMTMQTVMNTENPMLPRYSTGLVLRDT 84

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            L E    + ++++AG+ GS I +EIG+M+I E+IDA+  MG++    LI P+I  L+I 
Sbjct: 85  LLLEFSSTIMSLLLAGKVGSNIASEIGTMRITEQIDALDIMGINSANYLILPKIIGLMIC 144

Query: 267 LPLLTILANFSAIIGA 282
           +P+L  L+ F  + G 
Sbjct: 145 MPMLVTLSVFLGLAGG 160


>gi|313677561|ref|YP_004055557.1| hypothetical protein Ftrac_3477 [Marivirga tractuosa DSM 4126]
 gi|312944259|gb|ADR23449.1| protein of unknown function DUF140 [Marivirga tractuosa DSM 4126]
          Length = 243

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 29/233 (12%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSIL 206
            F  +    I +   +G + + +V + S   GAV   Q A+ L S          +   +
Sbjct: 20  SFSSYFKLTINECISIGWNSILIVAITSTFMGAVTTVQTAYNLVSPLIQNYVVAQVTREM 79

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            + E+   +TA++IAG+ GS+I   +G+M+I E+IDA+  MG++    L+ P+I A +I 
Sbjct: 80  VVLELAPTITAIVIAGKVGSSIAGGLGTMRITEQIDALEVMGVNASSYLVLPKIVAAMIM 139

Query: 267 LPLLTILANFSAIIGASIV---------IWKYYDI-----PFAVFFSRFHSTATLANIFT 312
            PLL ++A F A+ G  I              Y I     PF V F+             
Sbjct: 140 YPLLVVIAGFLALYGGYIAGTLTGILTETEYVYGIRIDFNPFTVQFA------------- 186

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            LIK+   A  I  ++  +GF     +  +G+  T+ V +S   V++ D + A
Sbjct: 187 -LIKSLVFAFLIASISAFQGFFTTGGALEVGQSSTSAVTKSCIAVLLADYILA 238


>gi|54022502|ref|YP_116744.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54014010|dbj|BAD55380.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 263

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 8/184 (4%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L+SF    ++ + GA  LS  GA   ++         ++G ++T +++AG   +A
Sbjct: 65  IPFTVLVSFTLNILLREIGAADLSGAGAAFGAVT--------QVGPIVTVLIVAGAGATA 116

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+  I EEIDA+R +G++ V+ L+ PR+ A +    +L  L     I+G  +   
Sbjct: 117 ICADLGARTIREEIDAMRVLGINPVQRLVVPRVLASMFVALMLNSLVCTIGIVGGFLFSV 176

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
              D+    F +       L  +    +KA       G+VA   G  V     S+G  V 
Sbjct: 177 YLQDVNPGAFVNGITLLTHLPELIISEVKAGLFGLIAGLVACYLGLNVKGGPKSVGDAVN 236

Query: 348 TCVV 351
             VV
Sbjct: 237 QTVV 240


>gi|120403834|ref|YP_953663.1| hypothetical protein Mvan_2850 [Mycobacterium vanbaalenii PYR-1]
 gi|119956652|gb|ABM13657.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 282

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 108/201 (53%), Gaps = 13/201 (6%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           ++++ F+T   G  +A QG   L   G E  +  L + + +R    ++  + +A   G+ 
Sbjct: 71  IVIVGFLTLAAGGTLAVQGYSSLGDIGIEALTGFLAAFINVRISAPVVAGIGLAATFGAG 130

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTI--LANFSAIIGASI 284
           + A++G+M+INEEIDA+ TMG+  V  L+S RI A +I++ PL +I  + +F+A    ++
Sbjct: 131 VTAQLGAMRINEEIDALETMGIRPVEYLVSTRIVAGMIAITPLYSIAVMLSFAASKLTTV 190

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG-FAVGVHSN--- 340
           V++      +  +F+ F +   L   F   ++A  MA A+ +V    G FA G  S    
Sbjct: 191 VLFGQSAGLYNHYFTTFLNPRDLLWSF---LQAILMAMAVLLVHTYFGYFATGGPSGVGV 247

Query: 341 SLGKKVTTCVVQSISIVIIID 361
           ++G  V T ++  IS+ +++ 
Sbjct: 248 AVGNAVRTSLIVVISVTLLVS 268


>gi|317125893|ref|YP_004100005.1| hypothetical protein Intca_2777 [Intrasporangium calvum DSM 43043]
 gi|315589981|gb|ADU49278.1| protein of unknown function DUF140 [Intrasporangium calvum DSM
           43043]
          Length = 282

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 86/194 (44%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V+  ++F TG  +  QG   L Q G   F+    +    REI  L+  + +A   G  
Sbjct: 71  VGVIAFMAFFTGTEVGLQGYSALEQLGTGAFTGFFSAYFNTREIAPLVAGLALAATVGCG 130

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
             A++G+M+I+EE+DA+  MG+  +  L++ R+ A  +++  L ++   S+      +  
Sbjct: 131 FTAQLGAMRISEEVDALEVMGVPSLPYLVTTRMIAGFVAVVPLYVIGLLSSYAATRFIAT 190

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
            Y+      +   FH      +IF    K    A  I ++    G+        +G  V 
Sbjct: 191 TYFGQSEGTYDHYFHLFLPPGDIFWSFGKVMVFAVVIILIHCYYGYTASGGPAGVGVAVG 250

Query: 348 TCVVQSISIVIIID 361
           T V  SI  + ++D
Sbjct: 251 TAVRTSIVAINVVD 264


>gi|331699196|ref|YP_004335435.1| hypothetical protein Psed_5449 [Pseudonocardia dioxanivorans
           CB1190]
 gi|326953885|gb|AEA27582.1| protein of unknown function DUF140 [Pseudonocardia dioxanivorans
           CB1190]
          Length = 259

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 111/222 (50%), Gaps = 14/222 (6%)

Query: 157 IRQMYYVG-VSGVPVVIL-ISFVTGAVIAQQGAFQLSQFGAE--IFSIDLMSILQLREIG 212
           I Q ++V  VS +P  +  I F  GA IA   A    QFGA+    +  +++I+Q  +  
Sbjct: 39  IEQTWFVTKVSALPTALFTIPF--GATIALLLAELTRQFGAQSQTGAGSVLAIVQ--QAA 94

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            ++TA++I+G  GSA+ A++G+  I EEI A+  +G+  ++ L+ PR+ A+  +  +L  
Sbjct: 95  PIVTALLISGAGGSAVCADLGARTIREEIAAMEVLGISPIQRLVVPRVLAMATTALVLNG 154

Query: 273 LANFSAIIGA---SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329
           LA    + G    ++V+      P A + + F + A +++I    +KA       G+VA 
Sbjct: 155 LATVVGVAGGYFFNVVVQG--GTPGA-YIASFSAIAQVSDIVVSEVKAALFGFTAGVVAA 211

Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
             G      +  +G  V   VV S  +V +I+ +    Y  I
Sbjct: 212 YRGLNPPPGAKGVGDAVNQAVVISFVLVFLINLILTALYLQI 253


>gi|325003316|ref|ZP_08124428.1| putative ABC-transporter integral membrane protein [Pseudonocardia
           sp. P1]
          Length = 259

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 8/221 (3%)

Query: 153 LLSLIRQMYYVG-VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211
           L  LI Q ++V  VS +P   L +   GA IA        QFGA+  +     +  +++ 
Sbjct: 35  LRELIEQTWFVTKVSALPTA-LFTIPFGATIALLLGELTRQFGAQSQTGAGAVLAIVQQA 93

Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271
             ++TA++I+G  GSA+ A++G+  I EEI A+  +G+  ++ L+ PR+ A+ I+  +L 
Sbjct: 94  APIVTALLISGAGGSAVCADLGARTIREEIAAMEVLGISPIQRLVVPRVLAMGITAVVLN 153

Query: 272 ILANFSAIIGA---SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328
            LA    + G    +++I          + S F + A +++I    IKA       G+VA
Sbjct: 154 GLATCVGVSGGYFFNVIIQGGSP---GAYISSFSAIAQVSDIVVSEIKAFLFGIVAGVVA 210

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              G      +  +G  V   VV S  +V +I+ +    Y 
Sbjct: 211 AYRGLNPPPGAKGVGDAVNQAVVISFVLVFLINLVLTALYL 251


>gi|311743965|ref|ZP_07717771.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Aeromicrobium marinum DSM 15272]
 gi|311313095|gb|EFQ83006.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Aeromicrobium marinum DSM 15272]
          Length = 275

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 67/109 (61%)

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
           +L++   G +IA Q      Q GA  F+  +  I  LR+   L+T++++AG  GSAI A+
Sbjct: 70  VLVAIPFGIIIAIQVGAVAQQIGAVSFTGAVNGIGILRQAAPLVTSLLMAGAVGSAICAQ 129

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280
           +G+  + EE+DA++ MGL+ V+ +++PR+ A ++   LL +    +A++
Sbjct: 130 LGAQTVREEVDAMKVMGLNPVQRIVAPRVAAAMVVGALLNVFVAATAMV 178


>gi|269124785|ref|YP_003298155.1| hypothetical protein Tcur_0520 [Thermomonospora curvata DSM 43183]
 gi|268309743|gb|ACY96117.1| protein of unknown function DUF140 [Thermomonospora curvata DSM
           43183]
          Length = 262

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 109/225 (48%), Gaps = 2/225 (0%)

Query: 146 SYKFKGFLLSLIRQMYYVG-VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204
           ++  + +    + Q +++  V+ +PV IL++   GA +A Q     +Q GA+  +   + 
Sbjct: 31  TWDVRTWFWEFVEQCWFLARVTSIPV-ILVALPLGATVALQVGQVAAQLGAQSATGGAVI 89

Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264
           +  +RE+  +  A++IAG  GSA+ A++G+ +I +E+DA+  M ++ +  L++PR+WA  
Sbjct: 90  VGLVREVAPIAAAMIIAGAGGSAMTADMGTRRIRDELDAMEVMAINPIHRLVTPRLWAAS 149

Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI 324
           +   LL  L   S   G  +      D+    +F    S    +++   L+KA       
Sbjct: 150 LISTLLVSLVVLSGAAGGFVFNVLLQDVTPGAYFDGATSLLQTSDLVVTLLKAWLFGMIA 209

Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           GIVA   G         +G+ V   +V +  +V  ++ +    YF
Sbjct: 210 GIVACYMGMNCASTPVGVGRAVNQAIVVAFLLVFALNYVITTVYF 254


>gi|296139955|ref|YP_003647198.1| hypothetical protein Tpau_2250 [Tsukamurella paurometabola DSM
           20162]
 gi|296028089|gb|ADG78859.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM
           20162]
          Length = 267

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 101/201 (50%), Gaps = 12/201 (5%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV-LL 215
           I Q +++    +    L++   GA+++ Q    + Q GAE F+    S+L + + G  ++
Sbjct: 47  IEQSWFIASVTILPTALVAVPFGAIVSLQTGSLIGQLGAESFT-GAASVLAVVQQGAPVV 105

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA+++AG +GSA+ A++G+  + EEI A+  +G++ V+ L+ PR+  ++    L+++  N
Sbjct: 106 TALLVAGAAGSAVCADLGARTVREEIAAMEVLGINPVQRLVVPRVLGMM----LVSMFLN 161

Query: 276 FSAIIGASIVIWKY-----YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330
               +   +  + +     +  P A + + F + A L ++  G  KA       G+VA  
Sbjct: 162 GLVSVVGVVGGYFFNVVLQHGTPGA-YLASFSALAQLPDLLVGEFKALVFGLIAGVVAAY 220

Query: 331 EGFAVGVHSNSLGKKVTTCVV 351
           +G   G     +G  V   VV
Sbjct: 221 KGLHPGGGPKGVGDAVNQSVV 241


>gi|88608548|ref|YP_506573.1| putative ABC transporter, permease protein [Neorickettsia sennetsu
           str. Miyayama]
 gi|88600717|gb|ABD46185.1| putative ABC transporter, permease protein [Neorickettsia sennetsu
           str. Miyayama]
          Length = 250

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 110/215 (51%), Gaps = 2/215 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +I+Q++ +G   +P+V   +   GA++A      L  F ++     +++    REIG ++
Sbjct: 34  IIKQLFLIGYYSMPIVAFSAVFIGAMLAFHTYTGLDLFQSQTMVAQILAKSITREIGPVV 93

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
             +++AGR  S I AEIG+M++ E++D +R++ ++    L+ P+I A +IS P+L I++ 
Sbjct: 94  VGIVVAGRVASTIAAEIGTMRVTEQVDLLRSLSINVHAYLVLPKIIAALISFPVLEIVST 153

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              ++G  ++    +     ++ S   +  T  ++  G+ K+ F       V+       
Sbjct: 154 LFGMLGGYLIGTYKFAFSKMLYVSDTLTFLTSKDLIAGMTKSFFFGFITASVSCFNALRA 213

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSL--FAIFY 368
              +  +G  VT  VV S  ++++ + L   AIF+
Sbjct: 214 THGAKGVGIAVTNSVVASFVLILLSNYLITLAIFH 248


>gi|262201122|ref|YP_003272330.1| hypothetical protein Gbro_1129 [Gordonia bronchialis DSM 43247]
 gi|262084469|gb|ACY20437.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247]
          Length = 275

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 67/116 (57%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V++L+S  TG V+  QG   L Q G++  +  L + +  RE+  L+  + ++   G    
Sbjct: 66  VMVLMSGFTGVVVGLQGYAALDQIGSQALTGFLSAYVNTREVAPLVAGLALSATVGCGFT 125

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           A++G+M+I+EEIDA+ TM +  +  L+S R+ A  +++  L +L   SA + + ++
Sbjct: 126 AQLGAMRISEEIDALETMAVPSIPFLVSTRVIAGFVAVIPLYVLGLLSAYLASRVI 181


>gi|145225117|ref|YP_001135795.1| hypothetical protein Mflv_4539 [Mycobacterium gilvum PYR-GCK]
 gi|315445484|ref|YP_004078363.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|145217603|gb|ABP47007.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
 gi|315263787|gb|ADU00529.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 282

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 106/202 (52%), Gaps = 9/202 (4%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V+++ F+T   G  +A QG   L   G E  +  L + + +R    ++  + +A   G+ 
Sbjct: 71  VVIVGFLTLAAGGTLAVQGYSSLGDIGIEALTGFLAAFINVRISAPVVAGIGLAATFGAG 130

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTI--LANFSAIIGASI 284
           + A++G+M+INEEIDA+ TMG+  V  L+S RI A +I++ PL +I  + +F A    ++
Sbjct: 131 VTAQLGAMRINEEIDALETMGIRPVEYLVSTRIVAGMIAIAPLYSIAVILSFLASKLTTV 190

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
           V++      +  +F+ F +   L   F   ++A  MA A+ +V    G+  G   + +G 
Sbjct: 191 VLFGQSAGLYNHYFTTFLNPRDLLWSF---LQAILMAMAVLLVHTYFGYFAGGGPSGVGV 247

Query: 345 KVTTCVVQSISIVIIIDSLFAI 366
            V   V  S+ +VI +  L ++
Sbjct: 248 AVGNAVRTSLIVVISVTLLVSL 269


>gi|118470268|ref|YP_889052.1| hypothetical protein MSMEG_4796 [Mycobacterium smegmatis str. MC2
           155]
 gi|118171555|gb|ABK72451.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
           155]
          Length = 257

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 9/195 (4%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L+SF    ++ + GA  LS  GA   ++         ++G ++T +++AG   +A
Sbjct: 58  IPFTVLVSFTLNILLRELGAADLSGAGAAFGAVT--------QLGPMVTVLIVAGAGATA 109

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + A++GS  I EEIDA+  +G++ ++ L++PRI A  +   LL  L     I+G  +   
Sbjct: 110 MCADLGSRTIREEIDAMEVLGINPIQRLVTPRILASGLVALLLNSLVVIIGILGGYVFSV 169

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKV 346
              D+    F +       +  +    IKA       G+VA   G   VG  + ++G  V
Sbjct: 170 FIQDVNPGAFAAGITLLTGVPEVIISCIKAALFGLIAGLVACYRGLTIVGGGAKAVGNAV 229

Query: 347 TTCVVQSISIVIIID 361
              VV +   + +I+
Sbjct: 230 NETVVYAFMALFVIN 244


>gi|118473565|ref|YP_887174.1| hypothetical protein MSMEG_2854 [Mycobacterium smegmatis str. MC2
           155]
 gi|118174852|gb|ABK75748.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
           155]
          Length = 281

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 106/202 (52%), Gaps = 9/202 (4%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V+++ F+T   G  +A QG   L   G E  +  L + + +R    ++  + +A   G+ 
Sbjct: 70  VVIVGFLTLAAGGTLAVQGYSSLGNIGIEALTGFLAAFINVRISAPVVAGIGLAATFGAG 129

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PL--LTILANFSAIIGASI 284
           + A++G+M+INEEIDA+ +MG+  V  L+S RI A ++++ PL  + ++ +F+A    ++
Sbjct: 130 VTAQLGAMRINEEIDALESMGIRPVEYLVSTRIVAGMVAITPLYAVAVILSFAASNLTTV 189

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
           V++      +  +FS F +   L   F   ++A  MA AI +V    GF      + +G 
Sbjct: 190 VMFGQSAGLYNHYFSTFLNPVDLLWSF---LQAILMAIAILLVHTYFGFFAAGGPSGVGV 246

Query: 345 KVTTCVVQSISIVIIIDSLFAI 366
            V   V  S+ +VI +  L ++
Sbjct: 247 AVGNAVRTSLIVVIAVTLLVSL 268


>gi|119717049|ref|YP_924014.1| hypothetical protein Noca_2825 [Nocardioides sp. JS614]
 gi|119537710|gb|ABL82327.1| protein of unknown function DUF140 [Nocardioides sp. JS614]
          Length = 279

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 90/194 (46%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V+  ++F  G  +  QG   LSQ G   FS  + +    RE+  L++A+ +A   G  
Sbjct: 68  VGVIAFLAFFAGTEVGIQGYASLSQIGVAKFSAFISAYFNTREVAPLVSAIALAATVGCG 127

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
             A +G+M+I+EEIDA+  MG+  +  L++ R+ A  +++  L ++A  ++ +   ++  
Sbjct: 128 YTARLGAMRISEEIDALEVMGIPSLPFLVTTRMVAAFVAVIPLYVVALSASYLSPRLITT 187

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
             Y      +   F       ++     K  F+A A+ ++    G+        +G  V 
Sbjct: 188 LVYGQSPGTYDHYFLQFLPPIDMLWSFFKLLFLAAAVILIHCYYGYTASGGPAGVGMAVG 247

Query: 348 TCVVQSISIVIIID 361
             +  SI  +++ D
Sbjct: 248 RAIRTSIVTIVVAD 261


>gi|196229086|ref|ZP_03127952.1| ABC-type transport system involved in resistance to organic
           solvents permease component-like protein [Chthoniobacter
           flavus Ellin428]
 gi|196227367|gb|EDY21871.1| ABC-type transport system involved in resistance to organic
           solvents permease component-like protein [Chthoniobacter
           flavus Ellin428]
          Length = 261

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 76/142 (53%), Gaps = 3/142 (2%)

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + ++I SM+ ++E+DA+  +GL    ++ +PR  ALI++ P L +L  +SA +GA +V+W
Sbjct: 114 MTSDITSMRASQEVDALEAVGLHPAEMIFAPRALALIVTAPALAVLGVYSACLGAWLVVW 173

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS--LGKK 345
                 F  F + F S+ T   +   + K    A A+ +++   GF VG  +    +G  
Sbjct: 174 LTAGTGFVAFVAAFASSVTSIGMLFAVGKLAITALAMSLISGYFGF-VGARAEQGFVGHI 232

Query: 346 VTTCVVQSISIVIIIDSLFAIF 367
            T+ V  ++   I+++ L ++ 
Sbjct: 233 TTSAVAMAVFSTIVVNLLLSLL 254


>gi|126436762|ref|YP_001072453.1| hypothetical protein Mjls_4190 [Mycobacterium sp. JLS]
 gi|126236562|gb|ABN99962.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 255

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 18/181 (9%)

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L +FGA  FS    ++  + +IG L++ +++AG   +A+ A++GS  I EE+DA+R +G+
Sbjct: 72  LLEFGAGDFSGSGAALAAVTQIGPLVSVLVVAGAGATAMCADLGSRTIREELDALRVLGI 131

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
           + V+ L+ PR+ A  +   LL+         G  IV        F+VF       + +A 
Sbjct: 132 NPVQALVVPRVLAATLVSLLLS---------GVVIVTGLVGGFGFSVFVQNVTPGSFVAG 182

Query: 310 I--FTG-------LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
           I   TG       L+KA        ++A  +G +VG    ++G  V   VV S   + +I
Sbjct: 183 ITLLTGAPELGIALVKAGLFGLTASLLACYKGISVGGGPAAVGNAVNETVVYSFVSLFVI 242

Query: 361 D 361
           D
Sbjct: 243 D 243


>gi|120404937|ref|YP_954766.1| hypothetical protein Mvan_3983 [Mycobacterium vanbaalenii PYR-1]
 gi|119957755|gb|ABM14760.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 284

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 115/234 (49%), Gaps = 35/234 (14%)

Query: 149 FKGFLLSLIRQM-----YYVGVSG-VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDL 202
           ++  LL LI QM       V V G V +V  ++  TGA++A QG  QL+  G E  +   
Sbjct: 48  YRTELLRLIAQMGLGSGALVVVGGTVAIVGFLTMTTGALVAVQGYNQLASVGFEALTGFA 107

Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
            +   +R I    T+V ++   G+A  A++G+M+INEEIDA+  +G+  V  L + R+ A
Sbjct: 108 SAFFNVRLIVPGTTSVALSATIGAAATAQLGAMRINEEIDALEVIGIRSVTYLAATRVLA 167

Query: 263 -LIISLPLLTI---LANFSAIIGASIVIWK---YYDIPFAVFFSRFHSTATLANIFTGLI 315
            +I+ +PL  +   +A  +A  G +++  +    YD  F  F S            T LI
Sbjct: 168 GVIVVIPLYCVAVMMAFLAARFGTTVIYGQGSGVYDHYFGTFLSP-----------TDLI 216

Query: 316 KAPFMACAIGIVAM---------KEGFAVGVHSNSLGKKV-TTCVVQSISIVII 359
            + F   A+ +V M           G   GV   ++G+ V T+ VV S+ IV+I
Sbjct: 217 WSFFQCVAMTVVIMLVHTYYGFTASGGPAGV-GEAVGRAVRTSMVVASVEIVMI 269


>gi|91215158|ref|ZP_01252130.1| hypothetical protein P700755_12712 [Psychroflexus torquis ATCC
           700755]
 gi|91186763|gb|EAS73134.1| hypothetical protein P700755_12712 [Psychroflexus torquis ATCC
           700755]
          Length = 247

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 30/212 (14%)

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQ---------FGAEIFSIDLMSILQLREIGVLL 215
           +S + +V+ ISF  GAVIA Q A   S          F A        SI+   E     
Sbjct: 42  ISSLGIVVFISFFIGAVIAIQTALNFSNPFVPKSLIGFAAR------QSII--LEFAPTF 93

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A+++AG+ GS I + IG+M+++E+IDA+  MG++ +  L+ P+I A+ +  P +  ++ 
Sbjct: 94  VAIIMAGKVGSYITSSIGTMRVSEQIDALEVMGINSLNYLVFPKIIAMCM-FPFVIAISM 152

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA------NIFTGLIKAPFMACAIGIVAM 329
           F  IIGA      Y    +  F S     A L        +F   +K+   A  +  V  
Sbjct: 153 FVGIIGA------YTASVYGGFLSSEQFLAGLQEDFIPFQVFYAFLKSFVFAIILATVPA 206

Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
             G+ +   S  +G+  TT  V +  I+I ++
Sbjct: 207 FHGYYMKGGSLEVGRAATTSFVWTSVIIIFMN 238


>gi|262203811|ref|YP_003275019.1| hypothetical protein Gbro_3952 [Gordonia bronchialis DSM 43247]
 gi|262087158|gb|ACY23126.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247]
          Length = 254

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 8/186 (4%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L+SF    ++ + GA  LS  GA + +I         +IG ++T +++AG   +A
Sbjct: 56  IPFTVLVSFTLNILLREIGAQDLSGAGAALGTIT--------QIGPIVTVLIVAGAGATA 107

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+  I EEIDA++ +G++ +  L+ PRI A      LL  L     I G  +   
Sbjct: 108 ICADLGARTIREEIDAMKVLGINPIHRLVVPRIIASTGVAVLLNSLVCTIGIGGGFVFSV 167

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
              D+    F +          +   ++KA       G+V   +G  V   +  +G  V 
Sbjct: 168 YLQDVNPGAFIANLTLLTGFGELMISMVKAALFGLFAGMVGCYQGLNVKGGAKGVGDAVN 227

Query: 348 TCVVQS 353
             VV S
Sbjct: 228 ETVVYS 233


>gi|240170399|ref|ZP_04749058.1| hypothetical protein MkanA1_13895 [Mycobacterium kansasii ATCC
           12478]
          Length = 247

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 9/185 (4%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L+SF    ++ + GA  LS  GA   ++         ++G L+T +++AG   +A
Sbjct: 48  IPFTVLVSFTLNILLRELGAADLSGAGAAFGAVT--------QVGPLVTVLIVAGAGATA 99

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + A++GS  I EEIDA+  +G++ V+ L++PR+ A  +   LL  L     I+G  +   
Sbjct: 100 MCADLGSRTIREEIDAMEVLGINPVQRLVTPRMLASGLVALLLNSLVVIIGILGGYVFSV 159

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-GVHSNSLGKKV 346
              D+    F +       +  +    +KA       G+VA   G  V G  + ++G  V
Sbjct: 160 FVQDVNPGAFAAGITLLTGVPEVIISCVKAALFGLIAGLVACYRGLTVSGGGAKAVGNAV 219

Query: 347 TTCVV 351
              VV
Sbjct: 220 NETVV 224


>gi|282866016|ref|ZP_06275064.1| protein of unknown function DUF140 [Streptomyces sp. ACTE]
 gi|282559055|gb|EFB64609.1| protein of unknown function DUF140 [Streptomyces sp. ACTE]
          Length = 267

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 62/106 (58%), Gaps = 1/106 (0%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           + V+I ++  TG+V+  QG   L Q G   F+  + +    REI  L+  + ++   G+ 
Sbjct: 56  IGVMIAMTLATGSVVGLQGYAALDQIGTSAFTGFISAYFNTREIAPLVAGLALSATVGAG 115

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTI 272
             A++G+M+INEE+DA+  MG+  +  L++ RI A +++ +PL  I
Sbjct: 116 FTAQLGAMRINEEVDALEAMGVRSMPYLVTTRIIAGVVAIIPLYAI 161


>gi|291298383|ref|YP_003509661.1| hypothetical protein Snas_0857 [Stackebrandtia nassauensis DSM
           44728]
 gi|290567603|gb|ADD40568.1| protein of unknown function DUF140 [Stackebrandtia nassauensis DSM
           44728]
          Length = 262

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 71/131 (54%), Gaps = 3/131 (2%)

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           ++F TG  +  QG   L+Q G   F+  + +    REI  L+  + ++   G+   A++G
Sbjct: 57  LTFFTGTEVGLQGYQALNQVGTSAFTGFISAYFNTREIAPLVAGIALSATVGAGFTAQLG 116

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL--LTILANFSAIIGASIVIWKYY 290
           +M++NEE+DA+  MG+  +  L++ R+ A L   +PL  L +L+++ A  G +I  +   
Sbjct: 117 AMRVNEEVDALEVMGVRSLPYLVTTRMLAGLAACVPLYVLALLSSYVATRGVAIFYFGQS 176

Query: 291 DIPFAVFFSRF 301
              +  +FS F
Sbjct: 177 SGTYDHYFSTF 187


>gi|289641746|ref|ZP_06473904.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
 gi|289508390|gb|EFD29331.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
          Length = 290

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 53/97 (54%)

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           + F+ G     + ++ L Q GA ++S    +   LRE+   +   + A + G  +VAEIG
Sbjct: 84  MQFIMGMQCGLEASYTLKQIGAPLYSGIFNAYCSLREMAPYMYGYIFAAKVGCGLVAEIG 143

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
           SM+I +EIDA+  MG+     L+  RI A  I++P L
Sbjct: 144 SMRIADEIDAMEVMGVRSRSYLVGTRIMAAWIAMPFL 180


>gi|183984680|ref|YP_001852971.1| hypothetical protein MMAR_4712 [Mycobacterium marinum M]
 gi|183178006|gb|ACC43116.1| conserved hypothetical membrane protein [Mycobacterium marinum M]
          Length = 268

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 9/185 (4%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L+SF    ++ + GA  LS  GA   ++         ++G L+T +++AG   +A
Sbjct: 69  IPFTVLVSFTLNILLRELGAADLSGAGAAFGAVT--------QVGPLVTVLIVAGAGATA 120

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + A++GS  I EEIDA+  +G++ V+ L++PR+ A  +   LL  L     I+G  +   
Sbjct: 121 MCADLGSRTIREEIDAMEVLGINPVQRLVTPRMLASGLVALLLNSLVVIIGIVGGYVFSV 180

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-GVHSNSLGKKV 346
              D+    F +       +  +    +KA       G+VA   G  + G  + ++G  V
Sbjct: 181 FVQDVNPGAFAAGITLLTGVPEVIISCVKAALFGLIAGLVACYRGLTISGGGAKAVGNAV 240

Query: 347 TTCVV 351
              VV
Sbjct: 241 NETVV 245


>gi|326382982|ref|ZP_08204671.1| hypothetical protein SCNU_08596 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326198118|gb|EGD55303.1| hypothetical protein SCNU_08596 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 286

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 67/118 (56%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V++L+S  TG V+  QG   L Q G++  +  L + +  RE+  L+  + ++   G  
Sbjct: 75  VGVMVLMSGFTGVVVGMQGYAALDQIGSQALTGFLSAYVNTREVAPLVAGLALSATVGCG 134

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
             A++G+M+I+EEIDA+  M +  +  L+S R+ A  I++  L +L   +A + + +V
Sbjct: 135 FTAQLGAMRISEEIDALEVMAVPSIPFLVSSRVIAGFIAVIPLYVLGLMAAYLASRVV 192


>gi|134103292|ref|YP_001108953.1| putative ABC transport system permease protein [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133915915|emb|CAM06028.1| putative ABC transport system permease protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 269

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 68/118 (57%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V++ ++  TG V+  QG   L+Q G   F+  + +    REI  L+  + ++   GS 
Sbjct: 58  VGVMVGMTLFTGTVVGLQGYAALNQIGTSAFAGFVSAYFNTREIAPLVAGLALSATVGSG 117

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
             A++G+M+I++EIDA+ TMG+  +  L++ R+ A  +++  L +L   ++ + A +V
Sbjct: 118 FTAQLGAMRISDEIDALETMGVPSLPYLVTTRVVAGFVAVVPLYVLGLLTSYLAARLV 175


>gi|108761681|ref|YP_632089.1| hypothetical protein MXAN_3909 [Myxococcus xanthus DK 1622]
 gi|108465561|gb|ABF90746.1| putative membrane protein [Myxococcus xanthus DK 1622]
          Length = 257

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 91/183 (49%)

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G ++  Q    + +FGA  F         L E G LL  ++++ R G+   AE+  M++ 
Sbjct: 63  GIIVVLQSGIYVQRFGARAFLGWAAGYGVLWEFGPLLLGLIMSARLGARNAAELALMQVG 122

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
            +I+ +R +GLD   IL++PR+ A+ +S+  L+ +    AI+  S+       +P  VFF
Sbjct: 123 GQIEGLRGIGLDPFAILVAPRVVAMEVSMLALSGVTFAVAILFESVAALLALGLPVRVFF 182

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
             F       ++  G++K      AI +++   G +    ++++G+     VV+S + + 
Sbjct: 183 GTFSQLLGPLDLLGGVVKTGIFGLAIALLSTTVGLSARGGAHAVGQAAANAVVRSCAAIF 242

Query: 359 IID 361
           ++D
Sbjct: 243 VLD 245


>gi|291004489|ref|ZP_06562462.1| putative ABC transport system permease protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 279

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 68/118 (57%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V++ ++  TG V+  QG   L+Q G   F+  + +    REI  L+  + ++   GS 
Sbjct: 68  VGVMVGMTLFTGTVVGLQGYAALNQIGTSAFAGFVSAYFNTREIAPLVAGLALSATVGSG 127

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
             A++G+M+I++EIDA+ TMG+  +  L++ R+ A  +++  L +L   ++ + A +V
Sbjct: 128 FTAQLGAMRISDEIDALETMGVPSLPYLVTTRVVAGFVAVVPLYVLGLLTSYLAARLV 185


>gi|326333403|ref|ZP_08199649.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1]
 gi|325948799|gb|EGD40893.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1]
          Length = 261

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 116/219 (52%), Gaps = 10/219 (4%)

Query: 146 SYKFKGFLLSLIRQMYYVG-VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF--SIDL 202
            ++F+ F    I+Q +++  V+ VP   L++   GAVIA Q    + QFGA+ F  S  +
Sbjct: 34  PFQFREF----IQQAWFIASVTIVPTA-LVAIPFGAVIALQVGGLVQQFGAQSFVGSAAV 88

Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
           ++++Q  +   + TA+++AG  GSAI A++G+ KI EE+DA+  +G+D ++ L+ PR+ A
Sbjct: 89  LAVVQ--QAAPIATALLVAGAGGSAIAADLGARKIREELDAMMVLGIDPIQRLVVPRVLA 146

Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322
            ++    L  L +   ++G  +            + + F + A +A+++ GL KA     
Sbjct: 147 AMMIAVFLNGLVSIVGVMGGYVFNVIIQGGTPGAYLASFTALAQMADLWQGLAKALVFGL 206

Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
              IVA  +G   G     +G  V   VV +  ++ I++
Sbjct: 207 IAAIVAAYKGMNAGGGPKGVGDAVNESVVITFLLLFIVN 245


>gi|320007321|gb|ADW02171.1| protein of unknown function DUF140 [Streptomyces flavogriseus ATCC
           33331]
          Length = 267

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 62/106 (58%), Gaps = 1/106 (0%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           + V+I ++  TG+V+  QG   L Q G   F+  + +    REI  L+  + ++   G+ 
Sbjct: 56  IGVMIAMTLATGSVVGLQGYAALDQIGTSAFTGFISAYFNTREIAPLVAGLALSATVGAG 115

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTI 272
             A++G+M+INEE+DA+  MG+  +  L++ RI A +++ +PL  I
Sbjct: 116 FTAQLGAMRINEEVDALEAMGVRSMPYLVTTRIIAGVVAIIPLYAI 161


>gi|118618294|ref|YP_906626.1| integral membrane protein YrbE3A [Mycobacterium ulcerans Agy99]
 gi|118570404|gb|ABL05155.1| conserved hypothetical integral membrane protein YrbE3A
           [Mycobacterium ulcerans Agy99]
          Length = 277

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 86/179 (48%), Gaps = 8/179 (4%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  ++  F+   ++   GA   S  G  IF++D        +   ++T +++AG   +A
Sbjct: 79  IPWAVISGFLFNVLLTDIGAADFSGTGCAIFTVD--------QSAPIVTVLVVAGAGATA 130

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + A++G+  I EE+DA+R MG++ ++ L+ PR+       P L+ L   + +IGA +   
Sbjct: 131 MCADLGARTIREELDALRVMGINPIQALVVPRVLGATTVSPALSSLVIATGLIGAFLCSV 190

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
               +    + +   +     ++   +IKA       G++A  +G +VG     +G+ V
Sbjct: 191 FLMHVSAGAWVTGLTTLTHTVDVVISMIKATLFGLMAGLIACYKGISVGGGPAGVGRAV 249


>gi|326330430|ref|ZP_08196738.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
 gi|325951705|gb|EGD43737.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
          Length = 287

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 10/196 (5%)

Query: 180 AVIAQQGAFQLSQFGA----EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
           A IA +  + L+Q GA     +FS      +     G +L+A +  G     +VAE+GSM
Sbjct: 88  AEIALEAHYLLAQLGAGGYTAVFSSTADYTVAPEMWGWILSAKVACG-----LVAELGSM 142

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA-NFSAIIGASIVIWKYYDIPF 294
           +I+EEIDA+  MG+D    L++ R+ A++I  P + +       I+G  + ++ ++ +  
Sbjct: 143 RISEEIDALDVMGIDSRAYLVNTRVLAMVIVTPFMFVAGTGLMYILGYYMNVYLFHSVSA 202

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
             + S F S     ++   LI+A  M   I +V    GF        +GK     +V ++
Sbjct: 203 GGYLSVFWSFTAQQDLILSLIQATIMGLLIVLVGCYYGFNASGGPVGVGKATAKSMVINL 262

Query: 355 SIVIIIDSLFAIFYFA 370
            IV  + ++F   +F 
Sbjct: 263 VIVSALGAVFQQLFFG 278


>gi|226349637|ref|YP_002776751.1| putative YrbE family protein [Rhodococcus opacus B4]
 gi|226245552|dbj|BAH55899.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 266

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 4/180 (2%)

Query: 188 FQLSQFGAEIFSIDLMS----ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           +Q++   AEI ++DL      +  +REIG ++T +++AG   +AI A++GS  I EEIDA
Sbjct: 80  YQINILLAEIGAVDLAGAGAGVAIVREIGPIVTVLVVAGAGSTAICADLGSRTIREEIDA 139

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           ++ +G+D +  L  PR+ A       L  L +   ++G  I            + +    
Sbjct: 140 MKVLGIDPIHRLCVPRVLASTFIAIFLNGLVSAVGLVGGYIATVYMQGASPGQYVTAISI 199

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              L + F   IKA       G+VA   G  V      +G  V   VV S  ++ + +S+
Sbjct: 200 ITGLGDFFVAEIKAAVFGMLAGLVACHLGLNVRGGPKGVGDAVNQTVVFSFLLLFLANSI 259


>gi|302551012|ref|ZP_07303354.1| ABC transporter integral membrane protein [Streptomyces
           viridochromogenes DSM 40736]
 gi|302468630|gb|EFL31723.1| ABC transporter integral membrane protein [Streptomyces
           viridochromogenes DSM 40736]
          Length = 271

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 65/123 (52%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V+  +SF TG  +  QG   L+Q G   F   L +    REI  L+  + ++   G+ 
Sbjct: 60  VGVIAFLSFFTGTEVGLQGYAALNQLGTSNFVAFLSAYFNTREIAPLVAGLALSATVGAG 119

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
             A++G+M+I+EE DA+  MG+  +  L++ R+ A  +++  L ++   S+ + A  +  
Sbjct: 120 FTAQLGAMRISEETDALEVMGVPSLPFLVTTRMIAGFVAVIPLYVIGLLSSYLAARTITT 179

Query: 288 KYY 290
            YY
Sbjct: 180 GYY 182


>gi|302525041|ref|ZP_07277383.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4]
 gi|302433936|gb|EFL05752.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4]
          Length = 257

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 14/203 (6%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L++Q +++    +    L+S   GAVIA       +Q GA+ F+     +  +++   ++
Sbjct: 36  LVQQFWFIASVSILPTALVSIPFGAVIALHIGSLTTQIGAQSFTGAASVLAIIQQASPIV 95

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA++IAG  GSA+ A++GS  I EEIDA+  +G+  ++ LI PR+ A   ++ +   L  
Sbjct: 96  TALLIAGAGGSAMCADLGSRTIREEIDAMEVLGVSPIQRLIVPRVLA---AMGVAVFLNG 152

Query: 276 FSAIIGASIVIWKYY-------DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328
             +++G   V+  Y+         P A + + F + A L +++   IKA        +VA
Sbjct: 153 MVSVVG---VLGGYFFNVIMQGGTPGA-YLASFSALAQLPDLWISEIKALLFGFVAAVVA 208

Query: 329 MKEGFAVGVHSNSLGKKVTTCVV 351
              G         +G  V   VV
Sbjct: 209 SYRGLNPRGGPKGVGDAVNQSVV 231


>gi|110680422|ref|YP_683429.1| hypothetical protein RD1_3241 [Roseobacter denitrificans OCh 114]
 gi|109456538|gb|ABG32743.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
          Length = 257

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 59/101 (58%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           Q+  +G   +PVV L +  TG  +A Q     S+F AE     ++++  +RE+G +L  +
Sbjct: 45  QLLNIGWLSLPVVGLTAVFTGGALALQIYAGGSRFNAEAVVPQIVAVGMVRELGPVLVGL 104

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
           MIA R  S+I AEI +MK+ E+IDA+ T+    ++ L  PR
Sbjct: 105 MIAARVTSSIAAEIATMKVTEQIDALVTLSTHPMKYLTVPR 145


>gi|297191127|ref|ZP_06908525.1| ABC transporter integral membrane protein [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|197721749|gb|EDY65657.1| ABC transporter integral membrane protein [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 272

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 85/194 (43%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V+  +SF TG  +  QG   L+Q G   F   L +    REI  L+  + ++   G+ 
Sbjct: 61  VGVIAFLSFFTGTEVGLQGYAALNQLGTSNFVAFLSAYFNTREIAPLVAGLALSATVGAG 120

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
             A++G+M+I+EE DA+  MG+  +  L++ R+ A  +++  L ++   S+   A  +  
Sbjct: 121 FTAQLGAMRISEETDALEVMGVPSLPFLVTTRMIAGFVAVIPLYVVGLLSSYFAARTITT 180

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
            YY      +   F       ++     K    A  I +V    G+        +G  V 
Sbjct: 181 GYYGQSAGTYDHYFQQYLPPVDVLWSFGKVIVFAVVIILVHCYYGYYASGGPAGVGVAVG 240

Query: 348 TCVVQSISIVIIID 361
             V  SI  + I+D
Sbjct: 241 RAVRTSIVAINILD 254


>gi|167951062|ref|ZP_02538136.1| ABC-type toluene export protein [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 189

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 60/93 (64%), Gaps = 8/93 (8%)

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM----SILQL 208
           L  +IRQ++++G   + V+++    TG V+A Q    L +FG    S+DL+    ++  L
Sbjct: 19  LEPVIRQLHFIGARSMLVIVISGLFTGMVLALQFHNTLERFG----SVDLLGSAVALALL 74

Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           RE+G ++ A+M+ GR+GSA+ AEIG M+ +E+I
Sbjct: 75  RELGPVMAALMVVGRAGSAMCAEIGIMRTSEQI 107


>gi|239945574|ref|ZP_04697511.1| putative YrbE family protein [Streptomyces roseosporus NRRL 15998]
 gi|239992041|ref|ZP_04712705.1| putative YrbE family protein [Streptomyces roseosporus NRRL 11379]
 gi|291449029|ref|ZP_06588419.1| ABC-transporter integral membrane protein [Streptomyces roseosporus
           NRRL 15998]
 gi|291351976|gb|EFE78880.1| ABC-transporter integral membrane protein [Streptomyces roseosporus
           NRRL 15998]
          Length = 267

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 62/106 (58%), Gaps = 1/106 (0%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           + V+I ++  TG V+  QG   L+Q G   F+  + +    REI  L+  + ++   G+ 
Sbjct: 56  IGVMIAMTLFTGTVVGLQGYAALNQIGTSAFTGFVSAYFNTREIAPLVAGLALSATVGAG 115

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTI 272
             A++G+M+INEE+DA+  MG+  +  L++ RI A +++ +PL  I
Sbjct: 116 FTAQLGAMRINEEVDALEAMGIRSMPYLVTTRIIAGVVAIIPLYAI 161


>gi|312138208|ref|YP_004005544.1| integral membrane protein yrbe2a [Rhodococcus equi 103S]
 gi|311887547|emb|CBH46859.1| putative integral membrane protein YrbE2A [Rhodococcus equi 103S]
          Length = 275

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 92/196 (46%), Gaps = 8/196 (4%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L+SF    ++ + GA  LS  GA + ++         ++G ++T +++AG   +A
Sbjct: 77  IPFTVLVSFTINILLREIGAADLSGAGAALGAVT--------QVGPIVTVLIVAGAGATA 128

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++ +  I EEIDA+R +G++ +  L+ PR+ A  +   LL  L     I+G  +   
Sbjct: 129 ICADLAARTIREEIDAMRVLGINPIHRLVVPRVLASTVVALLLNGLVCTIGILGGFLFSV 188

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
              D+    F +          +   ++KA       G++A   G  V   + S+G  V 
Sbjct: 189 YVQDVNPGAFVNGITLLTGFGELMISMLKAGLFGMIAGLMAAYLGMNVRGGAKSVGDAVN 248

Query: 348 TCVVQSISIVIIIDSL 363
             VV S   + +++ L
Sbjct: 249 QTVVFSFMALFVVNVL 264


>gi|239982860|ref|ZP_04705384.1| ABC-transporter integral membrane protein [Streptomyces albus
           J1074]
 gi|291454703|ref|ZP_06594093.1| ABC-transporter integral membrane protein [Streptomyces albus
           J1074]
 gi|291357652|gb|EFE84554.1| ABC-transporter integral membrane protein [Streptomyces albus
           J1074]
          Length = 268

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 61/106 (57%), Gaps = 1/106 (0%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V+I ++  TG V+  QG   L Q G   F+  + +    REI  L+  + ++   G+ 
Sbjct: 57  VGVMIAMTLFTGTVVGLQGYAALDQIGTAAFTGFVSAYFNTREIAPLVAGLALSATVGAG 116

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTI 272
             A++G+M+INEE+DA+  MG+  +  L++ RI A +++ +PL  I
Sbjct: 117 FTAQLGAMRINEEVDALEGMGIRSMPYLVTTRIIAGVVAIIPLYAI 162


>gi|262201204|ref|YP_003272412.1| hypothetical protein Gbro_1221 [Gordonia bronchialis DSM 43247]
 gi|262084551|gb|ACY20519.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247]
          Length = 349

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 98/201 (48%), Gaps = 8/201 (3%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P+ I+++   G +I Q GA  L   G+  F++       +++   L   +++ G   SA
Sbjct: 148 IPLGIIVTVQIGNIINQLGAQSLLGAGSG-FAV-------IQQAAPLAAGMLLGGAGASA 199

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+  + EEIDA+RTMG+D V  L+ PR+ A ++  PL+ +      ++ A  +  
Sbjct: 200 IAADLGARTVREEIDAMRTMGIDPVARLVVPRVLAAVVVAPLIALFIVLVGVLSAYYLAI 259

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
            + D+    ++  F S +++ +IF  L KA      I +V  + G         +   V 
Sbjct: 260 TFQDVGPGSYWQSFGSFSSVRDIFLALFKAVVFGFIIAVVGCQRGLEARGGPRGVADGVN 319

Query: 348 TCVVQSISIVIIIDSLFAIFY 368
             VV S   +I ++ +  + Y
Sbjct: 320 ATVVVSTVGIIGVNLVLTLVY 340


>gi|182434832|ref|YP_001822551.1| putative YrbE family protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326775350|ref|ZP_08234615.1| protein of unknown function DUF140 [Streptomyces cf. griseus
           XylebKG-1]
 gi|178463348|dbj|BAG17868.1| putative YrbE family protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326655683|gb|EGE40529.1| protein of unknown function DUF140 [Streptomyces cf. griseus
           XylebKG-1]
          Length = 267

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 62/106 (58%), Gaps = 1/106 (0%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           + V++ ++  TG V+  QG   L+Q G   F+  + +    REI  L+  + ++   G+ 
Sbjct: 56  IGVMVAMTLFTGTVVGLQGYAALNQIGTSAFTGFISAYFNTREIAPLVAGLALSATVGAG 115

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTI 272
             A++G+M+INEE+DA+  MG+  +  L++ RI A +++ +PL  I
Sbjct: 116 FTAQLGAMRINEEVDALEAMGIRSMPYLVTTRIIAGVVAIIPLYAI 161


>gi|326333296|ref|ZP_08199543.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1]
 gi|325948940|gb|EGD41033.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1]
          Length = 284

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 51/79 (64%), Gaps = 4/79 (5%)

Query: 188 FQLSQFGAEIFSIDLMSILQL----REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           FQ++Q   EI ++DL          REIG +++ +++AG   +AI A++GS KI EEIDA
Sbjct: 93  FQVNQLLIEIGAVDLAGAGAAVAVVREIGPIVSVLVVAGAGATAICADLGSRKIREEIDA 152

Query: 244 IRTMGLDFVRILISPRIWA 262
           + T+G+D +  L+ PR+ A
Sbjct: 153 MTTLGIDPIHRLVVPRVAA 171


>gi|297190650|ref|ZP_06908048.1| ABC-transporter integral membrane protein [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|197719877|gb|EDY63785.1| ABC-transporter integral membrane protein [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 267

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 74/139 (53%), Gaps = 7/139 (5%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           + V+I ++  TG V+  QG   L+Q G   F+  + +    REI  L+  + ++   G+ 
Sbjct: 56  IGVMIAMTLFTGTVVGLQGYAALNQIGTSAFTGFISAYFNTREIAPLVAGLALSATVGAG 115

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
             A++G+M+INEE+DA+  MG+  +  L++ RI A ++++  L  +   S+ + +  V  
Sbjct: 116 FTAQLGAMRINEEVDALEAMGVRSMPYLVTTRIIAGVVAIVPLYAIGLLSSYLASRWVTV 175

Query: 288 KY-------YDIPFAVFFS 299
            +       YD  FA+F S
Sbjct: 176 LFNGQSAGTYDHYFALFLS 194


>gi|325674886|ref|ZP_08154573.1| membrane protein YrbE4A [Rhodococcus equi ATCC 33707]
 gi|325554472|gb|EGD24147.1| membrane protein YrbE4A [Rhodococcus equi ATCC 33707]
          Length = 263

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 92/196 (46%), Gaps = 8/196 (4%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L+SF    ++ + GA  LS  GA + ++         ++G ++T +++AG   +A
Sbjct: 65  IPFTVLVSFTINILLREIGAADLSGAGAALGAVT--------QVGPIVTVLIVAGAGATA 116

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++ +  I EEIDA+R +G++ +  L+ PR+ A  +   LL  L     I+G  +   
Sbjct: 117 ICADLAARTIREEIDAMRVLGINPIHRLVVPRVLASTVVALLLNGLVCTIGILGGFLFSV 176

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
              D+    F +          +   ++KA       G++A   G  V   + S+G  V 
Sbjct: 177 YVQDVNPGAFVNGITLLTGFGELMISMLKAGLFGMIAGLMAAYLGMNVRGGAKSVGDAVN 236

Query: 348 TCVVQSISIVIIIDSL 363
             VV S   + +++ L
Sbjct: 237 QTVVFSFMALFVVNVL 252


>gi|296165199|ref|ZP_06847746.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295899388|gb|EFG78847.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 258

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 79/161 (49%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +RQ  ++  + V   IL+S      ++ Q A    Q GA   +     +  +R+   L+ 
Sbjct: 59  VRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGATSLAGAASGLAVIRQGASLVA 118

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           AV++A   GSAI A++GS  + EE DA+  MG+  +R L+ PR+ A ++    LT +  F
Sbjct: 119 AVLMASAVGSAITADLGSRTMREETDAMEVMGVSVIRRLVVPRLAAAVMIGVALTGVVCF 178

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
           +    + +    + +     F S F S AT  +I   L+KA
Sbjct: 179 AGFFASYMFNVYFQNGAPGSFVSTFASFATTGDIILALVKA 219


>gi|332169298|gb|AEE18553.1| protein of unknown function DUF140 [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 245

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 9/195 (4%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ----LREIGVLLTAVMIAGRSG 225
           +V  ISF  GAV+A Q A  L+     +    L+        + E      +V++AG+ G
Sbjct: 45  IVAFISFFVGAVVAIQTALNLNN---PLLPKSLIGFAARQSIILEFAPTFVSVIMAGKVG 101

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           S I + IG+M++ E+IDA+  MG++ +  L+ P+I A++I  P L  +  F  IIGA   
Sbjct: 102 SFITSSIGTMRVTEQIDALEVMGINSLNYLVFPKIVAMLI-YPFLIAIGMFLGIIGAYTA 160

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                  P   F S          +F    K    A  +  +    G+ +   +  +GK 
Sbjct: 161 AVYGGFAPSNDFLSGLQQDFIPFQLFYAFFKTFLFAFLLATIPAYHGYYMRGGALEVGKA 220

Query: 346 VTTCVV-QSISIVII 359
            TT  V  S++I+++
Sbjct: 221 STTSFVWTSVAIILV 235


>gi|291287596|ref|YP_003504412.1| hypothetical protein Dacet_1692 [Denitrovibrio acetiphilus DSM
           12809]
 gi|290884756|gb|ADD68456.1| protein of unknown function DUF140 [Denitrovibrio acetiphilus DSM
           12809]
          Length = 258

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 78/142 (54%)

Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
           L   RQ+Y+ GV  +P+  ++S V G  +       + QFGA+    D++ ++ ++ +  
Sbjct: 45  LVFFRQIYFTGVQILPMFSVVSIVIGLALVGGLTKFMVQFGAQDRVGDVLVLVTIKHLAP 104

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           ++ A+++  RS +A+ AEI  MK+N EID +R++ ++    L  PRI + I+    L  +
Sbjct: 105 MVAAILLVLRSSTAVTAEIALMKMNNEIDTLRSLSINPFIYLYIPRIASGIVCTGALATI 164

Query: 274 ANFSAIIGASIVIWKYYDIPFA 295
             + +++G  +++    +I F 
Sbjct: 165 FVYISLLGGYMILSFNLNISFG 186


>gi|326383099|ref|ZP_08204788.1| hypothetical protein SCNU_09181 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326198235|gb|EGD55420.1| hypothetical protein SCNU_09181 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 246

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 84/186 (45%), Gaps = 8/186 (4%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L+SF    ++ + GA  LS  GA + +I         +IG ++T +++AG   +A
Sbjct: 48  IPFTVLVSFTLNILLREIGAQDLSGAGAALGTIT--------QIGPIVTVLIVAGAGATA 99

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+  I EEIDA+  +G++ V  L+ PR+ A      LL  L     I G  I   
Sbjct: 100 ICADLGARTIREEIDALEVLGINPVHRLVVPRVIASTGVALLLNSLVCTIGIAGGFIFSV 159

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
              D+    F +       L  +   +IKA       G+V    G  V   +  +G  V 
Sbjct: 160 YLQDVNPGAFIANLTLLTGLGELVISMIKAALFGLFAGLVGCYRGLNVKGGAKGVGDAVN 219

Query: 348 TCVVQS 353
             VV S
Sbjct: 220 ETVVYS 225


>gi|145223093|ref|YP_001133771.1| hypothetical protein Mflv_2506 [Mycobacterium gilvum PYR-GCK]
 gi|145215579|gb|ABP44983.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
          Length = 269

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 27/204 (13%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L+SF    ++ + GA  LS  GA   ++         ++G L+T +++AG   +A
Sbjct: 70  IPFTVLVSFTLNILLRELGAADLSGAGAAFGAVT--------QVGPLVTVLIVAGAGATA 121

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + A++GS  I EEIDA+  +G++ V+ L++PR+ A  +   LL  L     I+G      
Sbjct: 122 MCADLGSRTIREEIDAMEVLGINPVQRLVTPRMLASGLVALLLNSLVVIIGILGG----- 176

Query: 288 KYYDIPFAVFFSRFHSTATLANI--FTGL-------IKAPFMACAIGIVAMKEGFAV-GV 337
            Y+   F++F    +  A  A I   TG+       +KA       G+VA   G  + G 
Sbjct: 177 -YF---FSIFVQDVNPGAFAAGITLLTGVPEVIISCVKAALFGLIAGLVACYRGLTITGG 232

Query: 338 HSNSLGKKVTTCVVQSISIVIIID 361
            + ++G  V   VV +   + +I+
Sbjct: 233 GAKAVGNAVNETVVYAFMALFVIN 256


>gi|54027083|ref|YP_121325.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54018591|dbj|BAD59961.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 264

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 106/210 (50%), Gaps = 16/210 (7%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I Q +++    +    L++   GAV+A Q    + Q GAE ++     +  +++   ++T
Sbjct: 44  IEQSWFIASVSILPSALVAIPFGAVVALQTGSLIKQLGAESYTGATSVLATVQQAAPVVT 103

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++IAG +GSA+ A++GS  I EEIDA+  +G+D +  L+ PR+  + +   LL  L + 
Sbjct: 104 ALIIAGAAGSAVAADLGSRTIREEIDAMEVLGVDPIARLVVPRVLGMTLVAVLLNGLVSV 163

Query: 277 SAIIGASIVIWKYYDI------PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330
             I G       ++++      P A + S F + A L +++ G IKA       G++A  
Sbjct: 164 VGIAGG-----YFFNVLLQGGTPGA-YLSSFSALAQLPDLWIGEIKAAIFGLLAGVIAAY 217

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
           +    G+H     K V   V QS+ I  ++
Sbjct: 218 K----GLHPKGGPKGVGDAVNQSVVITFLV 243


>gi|302560791|ref|ZP_07313133.1| ABC-transporter integral membrane protein [Streptomyces
           griseoflavus Tu4000]
 gi|302478409|gb|EFL41502.1| ABC-transporter integral membrane protein [Streptomyces
           griseoflavus Tu4000]
          Length = 268

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 72/137 (52%), Gaps = 7/137 (5%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V+I ++  TG V+  QG   L Q G   F+  + +    REI  L+  + ++   G+   
Sbjct: 59  VMIAMTLFTGTVVGLQGYAALDQIGTAAFTGFVSAYFNTREIAPLVAGLALSATVGAGFT 118

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A++G+M+INEE+DA+  MG+  +  L++ RI A ++++  L  +   S+ + +  V   +
Sbjct: 119 AQLGAMRINEEVDALEGMGIRSMPYLVTTRIIAGVVAIVPLYAIGLLSSYLASRYVTVLF 178

Query: 290 -------YDIPFAVFFS 299
                  YD  FA+F S
Sbjct: 179 NGQSRGTYDHYFALFLS 195


>gi|315443550|ref|YP_004076429.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|315261853|gb|ADT98594.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 269

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 27/204 (13%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L+SF    ++ + GA  LS  GA   ++         ++G L+T +++AG   +A
Sbjct: 70  IPFTVLVSFTLNILLRELGAADLSGAGAAFGAVT--------QVGPLVTVLIVAGAGATA 121

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + A++GS  I EEIDA+  +G++ V+ L++PR+ A  +   LL  L     I+G      
Sbjct: 122 MCADLGSRTIREEIDAMEVLGINPVQRLVTPRMLASGLVALLLNSLVVIIGILGG----- 176

Query: 288 KYYDIPFAVFFSRFHSTATLANI--FTGL-------IKAPFMACAIGIVAMKEGFAV-GV 337
            Y+   F++F    +  A  A I   TG+       +KA       G+VA   G  + G 
Sbjct: 177 -YF---FSIFVQDVNPGAFAAGITLLTGVPEVIISCVKAALFGLIAGLVACYRGLTITGG 232

Query: 338 HSNSLGKKVTTCVVQSISIVIIID 361
            + ++G  V   VV +   + +I+
Sbjct: 233 GAKAVGNAVNETVVYAFMALFVIN 256


>gi|269128029|ref|YP_003301399.1| hypothetical protein Tcur_3830 [Thermomonospora curvata DSM 43183]
 gi|268312987|gb|ACY99361.1| protein of unknown function DUF140 [Thermomonospora curvata DSM
           43183]
          Length = 267

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 69/118 (58%), Gaps = 2/118 (1%)

Query: 146 SYKFKGFLLSLIRQMYYVG-VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204
           ++  + +    I Q +++  V+ +PV +LI+   GA I+ Q      Q GA+  +  L+ 
Sbjct: 37  TWDVRTWWGEFIEQCWFIARVTSMPV-LLIAIPLGATISLQAGDIARQLGAQSGTGALVV 95

Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
              + ++  L +A++I+G  GSAI +++G+  I +E+ A+  MG++ V  L++PR+WA
Sbjct: 96  ANMITQVAPLASALLISGAGGSAITSDMGARNIRDELAAMEVMGINPVHRLVTPRLWA 153


>gi|29832443|ref|NP_827077.1| ABC transporter integral membrane protein [Streptomyces avermitilis
           MA-4680]
 gi|29609562|dbj|BAC73612.1| putative ABC transporter permease protein [Streptomyces avermitilis
           MA-4680]
          Length = 267

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 64/124 (51%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V+  +SF TG  +  QG   L+Q G   F   L +    REI  L+  + ++   G+ 
Sbjct: 56  VGVIAFLSFFTGTEVGLQGYAALNQLGTSNFVAFLSAYFNTREIAPLVAGLALSATVGAG 115

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
             A++G+M+I+EE DA+  MG+  +  L++ R+ A  +++  L ++   S+   A  +  
Sbjct: 116 FTAQLGAMRISEETDALEVMGVPSLPFLVTTRMIAGFVAVIPLYVVGLLSSYFAARTITT 175

Query: 288 KYYD 291
            YY 
Sbjct: 176 GYYG 179


>gi|15607727|ref|NP_215101.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis H37Rv]
 gi|15839989|ref|NP_335026.1| hypothetical protein MT0616 [Mycobacterium tuberculosis CDC1551]
 gi|31791769|ref|NP_854262.1| integral membrane protein YrbE2a [Mycobacterium bovis AF2122/97]
 gi|121636505|ref|YP_976728.1| integral membrane protein YrbE2a [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148660356|ref|YP_001281879.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis H37Ra]
 gi|148821789|ref|YP_001286543.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis F11]
 gi|167969010|ref|ZP_02551287.1| hypothetical integral membrane protein yrbE2A [Mycobacterium
           tuberculosis H37Ra]
 gi|215402355|ref|ZP_03414536.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           02_1987]
 gi|215410128|ref|ZP_03418936.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           94_M4241A]
 gi|215425819|ref|ZP_03423738.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis T92]
 gi|215444700|ref|ZP_03431452.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis T85]
 gi|218752227|ref|ZP_03531023.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis GM
           1503]
 gi|219556429|ref|ZP_03535505.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis T17]
 gi|224988977|ref|YP_002643664.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253797521|ref|YP_003030522.1| hypothetical protein TBMG_00594 [Mycobacterium tuberculosis KZN
           1435]
 gi|254230927|ref|ZP_04924254.1| hypothetical integral membrane protein yrbE2A [Mycobacterium
           tuberculosis C]
 gi|254363545|ref|ZP_04979591.1| hypothetical integral membrane protein yrbE2A [Mycobacterium
           tuberculosis str. Haarlem]
 gi|254549542|ref|ZP_05139989.1| hypothetical protein Mtube_03615 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260185464|ref|ZP_05762938.1| hypothetical protein MtubCP_05434 [Mycobacterium tuberculosis
           CPHL_A]
 gi|260199592|ref|ZP_05767083.1| hypothetical protein MtubT4_05534 [Mycobacterium tuberculosis T46]
 gi|260203751|ref|ZP_05771242.1| hypothetical protein MtubK8_05499 [Mycobacterium tuberculosis K85]
 gi|289441976|ref|ZP_06431720.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis
           T46]
 gi|289446140|ref|ZP_06435884.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis
           CPHL_A]
 gi|289552840|ref|ZP_06442050.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis KZN
           605]
 gi|289568520|ref|ZP_06448747.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis
           T17]
 gi|289573187|ref|ZP_06453414.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis K85]
 gi|289744301|ref|ZP_06503679.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           02_1987]
 gi|289749084|ref|ZP_06508462.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis
           T92]
 gi|289756666|ref|ZP_06516044.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|289760706|ref|ZP_06520084.1| hypothetical integral membrane protein yrbE2A [Mycobacterium
           tuberculosis GM 1503]
 gi|294996099|ref|ZP_06801790.1| hypothetical protein Mtub2_16765 [Mycobacterium tuberculosis 210]
 gi|297633081|ref|ZP_06950861.1| hypothetical protein MtubK4_03105 [Mycobacterium tuberculosis KZN
           4207]
 gi|297730059|ref|ZP_06959177.1| hypothetical protein MtubKR_03150 [Mycobacterium tuberculosis KZN
           R506]
 gi|298524074|ref|ZP_07011483.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|306774691|ref|ZP_07413028.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu001]
 gi|306781579|ref|ZP_07419916.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu002]
 gi|306783229|ref|ZP_07421551.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu003]
 gi|306787601|ref|ZP_07425923.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu004]
 gi|306794365|ref|ZP_07432667.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu005]
 gi|306796335|ref|ZP_07434637.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu006]
 gi|306802195|ref|ZP_07438863.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu008]
 gi|306806402|ref|ZP_07443070.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu007]
 gi|306966602|ref|ZP_07479263.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu009]
 gi|306970795|ref|ZP_07483456.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu010]
 gi|307078518|ref|ZP_07487688.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu011]
 gi|307083082|ref|ZP_07492195.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu012]
 gi|313657386|ref|ZP_07814266.1| hypothetical protein MtubKV_03140 [Mycobacterium tuberculosis KZN
           V2475]
 gi|2222771|emb|CAB09951.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE2A
           [Mycobacterium tuberculosis H37Rv]
 gi|13880131|gb|AAK44840.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|31617356|emb|CAD93464.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE2A
           [Mycobacterium bovis AF2122/97]
 gi|121492152|emb|CAL70617.1| Conserved hypothetical integral membrane protein yrbE2A
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124599986|gb|EAY58996.1| hypothetical integral membrane protein yrbE2A [Mycobacterium
           tuberculosis C]
 gi|134149059|gb|EBA41104.1| hypothetical integral membrane protein yrbE2A [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148504508|gb|ABQ72317.1| conserved hypothetical integral membrane protein YrbE2a
           [Mycobacterium tuberculosis H37Ra]
 gi|148720316|gb|ABR04941.1| hypothetical integral membrane protein yrbE2A [Mycobacterium
           tuberculosis F11]
 gi|224772090|dbj|BAH24896.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253319024|gb|ACT23627.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis
           KZN 1435]
 gi|289414895|gb|EFD12135.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis
           T46]
 gi|289419098|gb|EFD16299.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis
           CPHL_A]
 gi|289437472|gb|EFD19965.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis KZN
           605]
 gi|289537618|gb|EFD42196.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis K85]
 gi|289542274|gb|EFD45922.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis
           T17]
 gi|289684829|gb|EFD52317.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           02_1987]
 gi|289689671|gb|EFD57100.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis
           T92]
 gi|289708212|gb|EFD72228.1| hypothetical integral membrane protein yrbE2A [Mycobacterium
           tuberculosis GM 1503]
 gi|289712230|gb|EFD76242.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|298493868|gb|EFI29162.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|308216590|gb|EFO75989.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu001]
 gi|308325673|gb|EFP14524.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu002]
 gi|308331897|gb|EFP20748.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu003]
 gi|308335684|gb|EFP24535.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu004]
 gi|308337263|gb|EFP26114.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu005]
 gi|308343188|gb|EFP32039.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu006]
 gi|308347055|gb|EFP35906.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu007]
 gi|308350998|gb|EFP39849.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu008]
 gi|308355632|gb|EFP44483.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu009]
 gi|308359587|gb|EFP48438.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu010]
 gi|308363515|gb|EFP52366.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu011]
 gi|308367196|gb|EFP56047.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu012]
 gi|323720939|gb|EGB30004.1| hypothetical protein TMMG_03290 [Mycobacterium tuberculosis
           CDC1551A]
 gi|326902419|gb|EGE49352.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis
           W-148]
 gi|328457304|gb|AEB02727.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis KZN
           4207]
          Length = 265

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 109/221 (49%), Gaps = 25/221 (11%)

Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209
           +G+ ++ +  +  + VS +P+ +LI F    ++A+ GA  +S  GA + ++         
Sbjct: 49  QGWFITSVSLLPTLAVS-IPLTVLIIFTLNILLAEFGAADISGAGAALGAVT-------- 99

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
           ++G L T ++IAG   +AI A++G+  I EEIDA+  +G+D +  L+ PR+ A  I   L
Sbjct: 100 QLGPLTTVLVIAGAGATAICADLGARTIREEIDAMEVLGIDPIHRLVVPRVVAATIVAAL 159

Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA--NIFTGL---IKAPFMACAI 324
           L          GA I I       F+VF     + A +    + TGL   I +   +   
Sbjct: 160 LN---------GAVITIGLVGGFVFSVFIQHVSAGAYVGTLTLVTGLPEVIISVVKSATF 210

Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           G++A   G   G+ +    K V T V +++ + +I  +LFA
Sbjct: 211 GLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVI--ALFA 249


>gi|215429420|ref|ZP_03427339.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           EAS054]
 gi|289752626|ref|ZP_06512004.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
 gi|289693213|gb|EFD60642.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
          Length = 265

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 109/221 (49%), Gaps = 25/221 (11%)

Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209
           +G+ ++ +  +  + VS +P+ +LI F    ++A+ GA  +S  GA + ++         
Sbjct: 49  QGWFITSVSLLPTLAVS-IPLTVLIIFTLNILLAEFGAADISGAGAALGAVT-------- 99

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
           ++G L T ++IAG   +AI A++G+  I EEIDA+  +G+D +  L+ PR+ A  I   L
Sbjct: 100 QLGPLTTVLVIAGAGATAICADLGARTIREEIDAMEVLGIDPIHRLVVPRVVAATIVAAL 159

Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA--NIFTGL---IKAPFMACAI 324
           L          GA I I       F+VF     + A +    + TGL   I +   +   
Sbjct: 160 LN---------GAVITIGLVGGFVFSVFIQHVSAGAYVGTLTLVTGLPEVIISVVKSATF 210

Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           G++A   G   G+ +    K V T V +++ + +I  +LFA
Sbjct: 211 GLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVI--ALFA 249


>gi|294632698|ref|ZP_06711257.1| ABC-transporter integral membrane protein [Streptomyces sp. e14]
 gi|292830479|gb|EFF88829.1| ABC-transporter integral membrane protein [Streptomyces sp. e14]
          Length = 268

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 61/104 (58%), Gaps = 1/104 (0%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V+I ++  TG V+  QG   L Q G   F+  + +    REI  L++ + ++   G+   
Sbjct: 59  VMIGMTLFTGTVVGLQGYAALDQIGTAAFTGFVSAYFNTREIAPLVSGLALSATVGAGFT 118

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTI 272
           A++G+M+INEE+DA+  MG+  +  L++ RI A ++++ PL  I
Sbjct: 119 AQLGAMRINEEVDALEAMGIRSLPYLVTTRIIAGVVAIVPLYAI 162


>gi|324999480|ref|ZP_08120592.1| hypothetical protein PseP1_11966 [Pseudonocardia sp. P1]
          Length = 246

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 60/105 (57%), Gaps = 8/105 (7%)

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
           G+P V L++F    ++ + GA  LS  G+   ++         +IG + T  +IAG S +
Sbjct: 44  GIPFVALVTFQFNLILVEIGAIDLSGSGSGFATVT--------QIGPVATTFIIAGASST 95

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271
           AI A+IG+ KI EE+DA+  +G+D V  L+ PR+ A  ++  LL 
Sbjct: 96  AICADIGARKIREELDAMEVLGIDVVHRLVVPRVLATAVNAFLLN 140


>gi|120403833|ref|YP_953662.1| hypothetical protein Mvan_2849 [Mycobacterium vanbaalenii PYR-1]
 gi|119956651|gb|ABM13656.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 270

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 103/204 (50%), Gaps = 27/204 (13%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L+SF    ++ + GA  LS  GA   ++         ++G ++T +++AG   +A
Sbjct: 71  IPFTVLVSFTLNILLRELGAADLSGAGAAFGAVT--------QVGPMVTVLIVAGAGATA 122

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + A++GS  I EEIDA+  +G++ V+ L++PR+ A   S  +  +L +   IIG   ++ 
Sbjct: 123 MCADLGSRTIREEIDALEVLGINPVQRLVTPRMLA---SGLVALLLNSLVVIIG---ILG 176

Query: 288 KYYDIPFAVFFSRFHSTATLANI--FTGL-------IKAPFMACAIGIVAMKEGFAV-GV 337
            Y+   F++F    +  A  A I   TG+       +KA       G+VA   G ++ G 
Sbjct: 177 GYF---FSIFIQGVNPGAFAAGITLLTGVPEVIISCVKAALFGLIAGLVACYRGLSISGG 233

Query: 338 HSNSLGKKVTTCVVQSISIVIIID 361
            + ++G  V   VV +   + +++
Sbjct: 234 GAKAVGNAVNETVVYAFMALFVVN 257


>gi|120401387|ref|YP_951216.1| hypothetical protein Mvan_0362 [Mycobacterium vanbaalenii PYR-1]
 gi|119954205|gb|ABM11210.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 284

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 114/235 (48%), Gaps = 35/235 (14%)

Query: 148 KFKGFLLSLIRQMYY----VGVSG--VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSID 201
           ++ G LL LI QM      + V G  V +V  ++  TGA++A QG  Q +  G E  +  
Sbjct: 47  RYPGELLRLIAQMGLGTGALAVVGGTVAIVGFLTITTGALVAVQGYNQFASVGVEALTGF 106

Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261
             +   +R I    TAV ++   G+   A++G+M+INEEIDA+  +G+  V  L + R+ 
Sbjct: 107 ASAFFNVRLIVPGTTAVALSATIGAGATAQLGAMRINEEIDALEVIGIRSVTYLAATRVL 166

Query: 262 A-LIISLPLLTI---LANFSAIIGASIVIWK---YYDIPFAVFFSRFHSTATLANIFTGL 314
           A +++ +PL  I   +A  +A  G +++  +    YD  F  F +            T L
Sbjct: 167 AGVVVVIPLYCIAVMMAFLAARTGTTVIYGQGSGVYDHYFNTFLNP-----------TDL 215

Query: 315 IKAPFMACAIGIVAM---------KEGFAVGVHSNSLGKKV-TTCVVQSISIVII 359
           + +   + AI +V M           G   GV   ++G+ V T+ VV ++ IV+I
Sbjct: 216 VWSFLQSVAITVVVMLVHTYYGYTARGGPAGV-GEAVGRAVRTSMVVAAVEIVMI 269


>gi|120405557|ref|YP_955386.1| hypothetical protein Mvan_4605 [Mycobacterium vanbaalenii PYR-1]
 gi|119958375|gb|ABM15380.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 284

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 86/170 (50%), Gaps = 16/170 (9%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSG---------VPVVILISFVTGAVIAQQGAFQLSQFGAE 196
            Y F  + + LIR +  +G+           V +V  ++  TGA++A QG    S+ G E
Sbjct: 42  GYVFTHYGVELIRIIAQMGLGAGALIVIGGTVAIVGFLTVTTGALVAVQGYSDFSELGVE 101

Query: 197 IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILI 256
             +  + +   +R I    TA+ ++   G+   A++G+M+INEEIDA+  MG+  +  L 
Sbjct: 102 ALTGFVSAYFNVRLIAPATTAIALSATIGAGATAQLGAMRINEEIDALEVMGIRSIAFLA 161

Query: 257 SPRIWA-LIISLPLLTI---LANFSAIIGASIVIWK---YYDIPFAVFFS 299
           S R+ A  ++ +PL  +   +A ++A  G +++  +    YD  F  F +
Sbjct: 162 SSRVIAGFLVVIPLYCVGVLMAFWAARFGTTVIYGQSTGVYDHYFKTFLN 211


>gi|319948072|ref|ZP_08022243.1| hypothetical protein ES5_02019 [Dietzia cinnamea P4]
 gi|319438260|gb|EFV93209.1| hypothetical protein ES5_02019 [Dietzia cinnamea P4]
          Length = 254

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 8/196 (4%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L+SF    ++ + GA  LS  GA + ++         ++G ++T +++AG   +A
Sbjct: 56  IPFTVLVSFTLNILLREIGAADLSGAGAALGAVT--------QVGPMVTVLIVAGAGATA 107

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+  I EEIDA+  +G+D V+ L+ PR+ A      LL  L     I+G  +   
Sbjct: 108 ICADLGARTIREEIDAMEVLGIDPVKRLVVPRVAASTFVALLLNGLVCTIGILGGFLFSV 167

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
               +    F +       L  +    IKA       G+VA  +G  V      +G  V 
Sbjct: 168 LLQGVNPGAFVNGITLLTGLGELILAQIKAGVFGMLAGLVACYKGLYVRGGPKEVGSAVN 227

Query: 348 TCVVQSISIVIIIDSL 363
             VV +   + +++++
Sbjct: 228 ETVVFAFMCLFVVNTV 243


>gi|169631232|ref|YP_001704881.1| hypothetical protein MAB_4154c [Mycobacterium abscessus ATCC 19977]
 gi|169243199|emb|CAM64227.1| Conserved hypothetical protein [Mycobacterium abscessus]
          Length = 286

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 3/114 (2%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V + ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+ 
Sbjct: 75  VGVAVFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVVAGIAMAATIGAG 134

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL--LTILANFSA 278
             A++G+M++ EEIDA+ TM +  +  L+S R+ A LI  +PL  L++LA F A
Sbjct: 135 TTAQLGAMRVAEEIDALETMAVHAISYLVSTRLVAGLIAIIPLYSLSVLAAFFA 188


>gi|239931479|ref|ZP_04688432.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis
           ATCC 14672]
 gi|291439855|ref|ZP_06579245.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis
           ATCC 14672]
 gi|291342750|gb|EFE69706.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis
           ATCC 14672]
          Length = 268

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 72/137 (52%), Gaps = 7/137 (5%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V+I ++  TG V+  QG   L Q G   F+  + +    REI  L+  + ++   G+   
Sbjct: 59  VMIAMTLFTGTVVGLQGYAALDQIGTAAFTGFVSAYFNTREIAPLVAGLALSATVGAGFT 118

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTILANFSAIIGASIVIW- 287
           A++G+M+INEE+DA+  MG+  +  L++ RI A ++++ PL  I    S +   S+ +  
Sbjct: 119 AQLGAMRINEEVDALEGMGIRSMPYLVTTRIIAGVVAIVPLYAIGLLSSYLASRSVTVLF 178

Query: 288 -----KYYDIPFAVFFS 299
                  YD  FA+F S
Sbjct: 179 NGQSRGTYDHYFALFLS 195


>gi|226364205|ref|YP_002781987.1| YrbE family protein [Rhodococcus opacus B4]
 gi|226242694|dbj|BAH53042.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 254

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 8/196 (4%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L+SF    ++ + GA  LS  GA + ++         ++G ++T +++AG   +A
Sbjct: 56  IPFTVLVSFTINILLREIGAADLSGAGAALGTVT--------QVGPIVTVLIVAGAGATA 107

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++ +  I EEIDA+R +G++ +  L+ PR+ A  +   LL  L     I+G  +   
Sbjct: 108 ICADLSARTIREEIDAMRVLGINPIHRLVVPRVLASTVVALLLNGLVCTIGILGGFVFSV 167

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
              D+    F +          +    +KA       G+VA   G  V   + S+G  V 
Sbjct: 168 YIQDVNPGAFVNGITLLTGFGELVISEVKAGLFGMIAGLVAAYLGLNVKGGAKSVGDAVN 227

Query: 348 TCVVQSISIVIIIDSL 363
             VV S   + +++ L
Sbjct: 228 QTVVFSFMALFVVNVL 243


>gi|108801581|ref|YP_641778.1| hypothetical protein Mmcs_4618 [Mycobacterium sp. MCS]
 gi|119870735|ref|YP_940687.1| hypothetical protein Mkms_4706 [Mycobacterium sp. KMS]
 gi|108772000|gb|ABG10722.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
 gi|119696824|gb|ABL93897.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
          Length = 280

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 3/114 (2%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V   ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+ 
Sbjct: 69  VGVAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAGIALAATIGAG 128

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PL--LTILANFSA 278
             A++G+M++ EEIDA+ TM +  V  L+S R+ A +I++ PL  L++LA F A
Sbjct: 129 TTAQLGAMRVAEEIDAVETMAVHSVSYLVSTRLMAGLIAIVPLYSLSVLAAFFA 182


>gi|296179480|gb|ADG96485.1| SupA [Gordonia cholesterolivorans]
          Length = 257

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 8/95 (8%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +++ F    ++ + GA  LS  GA I  I        REIG ++T +++AG   +A
Sbjct: 63  IPFCVMVVFQINVLLNEIGAIDLSGAGAGIAVI--------REIGPIVTVLVVAGAGATA 114

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
           I A++GS  I EEIDA+R +G+D ++ L  PR+ A
Sbjct: 115 ICADLGSRTIREEIDAMRVLGIDPIQRLAVPRVIA 149


>gi|254392559|ref|ZP_05007737.1| ABC-transporter integral membrane protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294816013|ref|ZP_06774656.1| ABC-transporter integral membrane protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|326444355|ref|ZP_08219089.1| putative YrbE family protein [Streptomyces clavuligerus ATCC 27064]
 gi|197706224|gb|EDY52036.1| ABC-transporter integral membrane protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294328612|gb|EFG10255.1| ABC-transporter integral membrane protein [Streptomyces
           clavuligerus ATCC 27064]
          Length = 267

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 61/104 (58%), Gaps = 1/104 (0%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V++ ++  TG V+  QG   L+Q G   F+  + +    REI  L+  + ++   G+   
Sbjct: 58  VMVAMTLFTGTVVGLQGYAALNQIGTSAFTGFVSAYFNTREIAPLVAGLALSATVGAGFT 117

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTI 272
           A++G+M+INEE+DA+  MG+  +  L++ RI A +++ +PL  I
Sbjct: 118 AQLGAMRINEEVDALEAMGVRSLPYLVTTRIIAGVVAIIPLYAI 161


>gi|120405354|ref|YP_955183.1| hypothetical protein Mvan_4401 [Mycobacterium vanbaalenii PYR-1]
 gi|119958172|gb|ABM15177.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 250

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 22/173 (12%)

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L++FGA  FS    +   + +IG ++T +++AG   +A+ A++G+  I +EIDA+R MG+
Sbjct: 67  LTEFGAADFSGTGAAYGAVTQIGPIVTVLVVAGAGATAMCADLGARTIRDEIDAMRVMGI 126

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY--DIPFAVFFSR-----FH 302
           + ++ L+ PR+ A           A+F A++ +S VI         F VF        F 
Sbjct: 127 NPLQALVLPRVLA-----------ASFVAVMLSSAVILVSLVGSYVFGVFIQNVTPGAFA 175

Query: 303 STATL----ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
           +  TL     ++   LIKA       G++A  +G +VG     +G  V   VV
Sbjct: 176 AGMTLLTGVGDVVVALIKAAMFGLCAGLIACYKGLSVGGGPAGVGLAVNETVV 228


>gi|254773835|ref|ZP_05215351.1| TrnB1 protein [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 260

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 9/185 (4%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L+SF    ++ + GA  LS  GA   ++         ++G L+T +++AG   +A
Sbjct: 61  IPFTVLVSFTLNILLRELGAADLSGAGAAFGAVT--------QLGPLVTVLIVAGAGATA 112

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + A++GS  I EEIDA+  +G++ ++ L++PR+ A  +   LL  L     ++G  +   
Sbjct: 113 MCADLGSRTIREEIDAMEVLGINPIQRLVTPRMLASGLVAFLLNSLVVIIGVLGGYVFSV 172

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-GVHSNSLGKKV 346
              D+    F +       +  +    IKA       G+VA   G ++ G  + ++G  V
Sbjct: 173 FVQDVNPGAFAAGITLLTGVPEVVISCIKAALFGLIAGLVACYRGLSITGGGAKAVGNAV 232

Query: 347 TTCVV 351
              VV
Sbjct: 233 NETVV 237


>gi|313158068|gb|EFR57473.1| conserved hypothetical protein [Alistipes sp. HGB5]
          Length = 247

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 1/127 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSILQLREIGVL 214
           ++ +M  +G+  + +  +IS   GAVI  Q    L S F              + E    
Sbjct: 32  IVYEMESLGIDSIGLTAIISVFIGAVITLQMCINLDSPFIPRSLVGYATRETMILEFSST 91

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           + A+++AG+ GS+I +EIG+M+I E+IDA+  MG++    LI P+I A ++  P LTIL+
Sbjct: 92  VVALILAGKVGSSIASEIGTMRITEQIDALEIMGVNSASYLILPKIVAAVVFFPFLTILS 151

Query: 275 NFSAIIG 281
               IIG
Sbjct: 152 IAIGIIG 158


>gi|118463749|ref|YP_880207.1| TrnB1 protein [Mycobacterium avium 104]
 gi|118165036|gb|ABK65933.1| TrnB1 protein [Mycobacterium avium 104]
          Length = 272

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 9/185 (4%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L+SF    ++ + GA  LS  GA   ++         ++G L+T +++AG   +A
Sbjct: 73  IPFTVLVSFTLNILLRELGAADLSGAGAAFGAVT--------QLGPLVTVLIVAGAGATA 124

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + A++GS  I EEIDA+  +G++ ++ L++PR+ A  +   LL  L     ++G  +   
Sbjct: 125 MCADLGSRTIREEIDAMEVLGINPIQRLVTPRMLASGLVAFLLNSLVVIIGVLGGYVFSV 184

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-GVHSNSLGKKV 346
              D+    F +       +  +    IKA       G+VA   G ++ G  + ++G  V
Sbjct: 185 FVQDVNPGAFAAGITLLTGVPEVVISCIKAALFGLIAGLVACYRGLSITGGGAKAVGNAV 244

Query: 347 TTCVV 351
              VV
Sbjct: 245 NETVV 249


>gi|111021668|ref|YP_704640.1| hypothetical protein RHA1_ro04696 [Rhodococcus jostii RHA1]
 gi|110821198|gb|ABG96482.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
          Length = 254

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 8/196 (4%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L+SF    ++ + GA  LS  GA + ++         ++G ++T +++AG   +A
Sbjct: 56  IPFTVLVSFTINILLREIGAADLSGAGAALGTVT--------QVGPIVTVLIVAGAGATA 107

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++ +  I EEIDA+R +G++ +  L+ PR+ A  +   LL  L     I+G  +   
Sbjct: 108 ICADLSARTIREEIDAMRVLGINPIHRLVVPRVLASTVVALLLNGLVCTIGILGGFVFSV 167

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
              D+    F +          +    +KA       G+VA   G  V   + S+G  V 
Sbjct: 168 YIQDVNPGAFVNGITLLTGFGELVISEVKAGLFGMIAGLVAAYLGLNVRGGAKSVGDAVN 227

Query: 348 TCVVQSISIVIIIDSL 363
             VV S   + +++ L
Sbjct: 228 QTVVFSFMALFVVNVL 243


>gi|41406855|ref|NP_959691.1| hypothetical protein MAP0757 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41395205|gb|AAS03074.1| hypothetical protein MAP_0757 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 260

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 9/185 (4%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L+SF    ++ + GA  LS  GA   ++         ++G L+T +++AG   +A
Sbjct: 61  IPFTVLVSFTLNILLRELGAADLSGAGAAFGAVT--------QLGPLVTVLIVAGAGATA 112

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + A++GS  I EEIDA+  +G++ ++ L++PR+ A  +   LL  L     ++G  +   
Sbjct: 113 MCADLGSRTIREEIDAMEVLGINPIQRLVTPRMLASGLVAFLLNSLVVIIGVLGGYVFSV 172

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-GVHSNSLGKKV 346
              D+    F +       +  +    IKA       G+VA   G ++ G  + ++G  V
Sbjct: 173 FVQDVNPGAFAAGITLLTGVPEVVISCIKAALFGLIAGLVACYRGLSITGGGAKAVGNAV 232

Query: 347 TTCVV 351
              VV
Sbjct: 233 NETVV 237


>gi|119717050|ref|YP_924015.1| hypothetical protein Noca_2826 [Nocardioides sp. JS614]
 gi|119537711|gb|ABL82328.1| protein of unknown function DUF140 [Nocardioides sp. JS614]
          Length = 257

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 108/223 (48%), Gaps = 8/223 (3%)

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           L   + Q +++    +   IL+S   GAVI+ Q      Q GA+ F+     +  +RE  
Sbjct: 33  LREFVEQAWFITSVTLMPTILVSIPFGAVISLQVGNLTGQLGAQSFAGATAVLAVVREAA 92

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            +  A++IAG +GSAI +++G+ KI EEIDA+  +G+D +  LI PR+ A +     + +
Sbjct: 93  PIAAALIIAGAAGSAICSDMGARKIREEIDAMEVLGVDPLERLIVPRVVATM----FVAL 148

Query: 273 LANFSAIIGASIVIWKYYDI----PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328
           + N   I       + +  I        F S F + A+L +++  +IKA        IV 
Sbjct: 149 MINGIVIGAGIGGGYFFTVIVQGGSAGAFLSSFTALASLPDLYISMIKAVVFGWLAAIVG 208

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
             +G   G   + +G+ V   V+ +  ++  ++++    YF +
Sbjct: 209 SYKGLNAGGGPSGVGRAVNESVIVAFMLLFFLNAVITAIYFQV 251


>gi|126437565|ref|YP_001073256.1| hypothetical protein Mjls_5001 [Mycobacterium sp. JLS]
 gi|126237365|gb|ABO00766.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 280

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 3/114 (2%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V   ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+ 
Sbjct: 69  VGVAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAGIALAATIGAG 128

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PL--LTILANFSA 278
             A++G+M++ EEIDA+ TM +  V  L+S R+ A +I++ PL  L++LA F A
Sbjct: 129 TTAQLGAMRVAEEIDAVETMAVHSVSYLVSTRLMAGLIAIVPLYSLSVLAAFFA 182


>gi|311741974|ref|ZP_07715784.1| ABC superfamily ATP binding cassette transporter membrane protein
           [Aeromicrobium marinum DSM 15272]
 gi|311314467|gb|EFQ84374.1| ABC superfamily ATP binding cassette transporter membrane protein
           [Aeromicrobium marinum DSM 15272]
          Length = 288

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 76/136 (55%), Gaps = 12/136 (8%)

Query: 135 VISNTGEFCASSYKF----KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190
           ++ N   FC  +++     +  +  +++Q +++    +   I++S     +I     FQ+
Sbjct: 45  LVGNFYNFCGKTFRTMFTRRPVVDEIVQQAWFISSVSIMPAIMVSIPLCMIIV----FQV 100

Query: 191 SQFGAEIFSIDLMSILQ----LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           +Q   +I ++DL         +REIG +++ +++AG   +A+ A++G+ KI +EIDA+ T
Sbjct: 101 NQLLIQIGAVDLAGAGAAVAVIREIGPIVSVLVVAGAGATAVCADLGARKIRDEIDAMET 160

Query: 247 MGLDFVRILISPRIWA 262
           +G+D +  L+ PR+ A
Sbjct: 161 LGIDPIHRLVVPRVIA 176


>gi|257054443|ref|YP_003132275.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Saccharomonospora viridis
           DSM 43017]
 gi|256584315|gb|ACU95448.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Saccharomonospora viridis
           DSM 43017]
          Length = 279

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 74/138 (53%), Gaps = 7/138 (5%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V++ ++  TG ++  QG   L   G   F+  L S    REI  L+  + ++   GS 
Sbjct: 68  VGVMVGLTLFTGVLVGLQGFSALDSIGTSAFTGFLTSFFNTREIAPLVAGLALSATVGSG 127

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA-SIVI 286
             A++G+M+I+EE+DA+  MG+  +  L++ RI A  I++  L I+   S+ + + ++V+
Sbjct: 128 FTAQLGAMRISEEVDALEVMGVPSLPYLVTTRIIAGFIAIIPLYIIGLLSSYLASRTVVV 187

Query: 287 WKY------YDIPFAVFF 298
           + Y      YD  F +F 
Sbjct: 188 YLYGQSAGTYDHYFDMFL 205


>gi|324997539|ref|ZP_08118651.1| hypothetical protein PseP1_02183 [Pseudonocardia sp. P1]
          Length = 286

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 57/101 (56%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ ++  V G V   + ++ L Q GA ++S    +   +RE+   +   + A + G  +V
Sbjct: 76  IIWVMQGVMGTVCGLEASYTLKQIGAPLYSGIFNAYCSIREMAPYMWGYIFAAKVGCGLV 135

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
           AE+GSM+I++EIDA+  MG+     L+  R+ A  +++P L
Sbjct: 136 AELGSMRISDEIDAMEVMGIKARSYLVGTRVIAAWLAIPFL 176


>gi|32141168|ref|NP_733570.1| ABC-transporter integral membrane protein [Streptomyces coelicolor
           A3(2)]
 gi|256787959|ref|ZP_05526390.1| ABC-transporter integral membrane protein [Streptomyces lividans
           TK24]
 gi|289771846|ref|ZP_06531224.1| ABC-transporter integral membrane protein [Streptomyces lividans
           TK24]
 gi|24413768|emb|CAD55305.1| putative ABC-transporter integral membrane protein [Streptomyces
           coelicolor A3(2)]
 gi|289702045|gb|EFD69474.1| ABC-transporter integral membrane protein [Streptomyces lividans
           TK24]
          Length = 268

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 60/104 (57%), Gaps = 1/104 (0%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V+I ++  TG V+  QG   L Q G   F+  + +    REI  L+  + ++   G+   
Sbjct: 59  VMIAMTLFTGTVVGIQGYAALDQIGTSAFTGFVSAYFNTREIAPLVAGLALSATVGAGFT 118

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTI 272
           A++G+M+INEE+DA+  MG+  +  L++ RI A +++ +PL  I
Sbjct: 119 AQLGAMRINEEVDALEGMGIRSMPYLVTTRIIAGVVAIIPLYAI 162


>gi|126433443|ref|YP_001069134.1| hypothetical protein Mjls_0834 [Mycobacterium sp. JLS]
 gi|126233243|gb|ABN96643.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 281

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 101/202 (50%), Gaps = 6/202 (2%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           + V++L+    GA +A +    L+  G    S  +  I  +RE+G +++AV  AG++G  
Sbjct: 70  ISVLLLLGIAVGASLAVEAFAVLNIIGFGGLSGIIGGIGGVRELGPIVSAVAFAGQAGCR 129

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPR-IWALIISLP--LLTILANFSAIIGASI 284
           + AEIG+M+I EEIDA+  +GL  +  ++  R I A+I+ +P  L+ ++ANF  +     
Sbjct: 130 MTAEIGAMRIAEEIDALEAIGLRPIPFVVGTRLIGAMILVVPGYLVALIANFFVM---DT 186

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
           VI  +++ P   +   F    T  ++   +IK      A+ ++    G+        +G+
Sbjct: 187 VIRVFHNQPGGTYNHYFAQFVTPTDLAYSVIKVAVFCMAVTLIHCYYGYFASGGPVGVGR 246

Query: 345 KVTTCVVQSISIVIIIDSLFAI 366
                V  S+  +I +D +  +
Sbjct: 247 ASGRAVRTSLITIIFLDLILTV 268


>gi|328880857|emb|CCA54096.1| toluene tolerance protein [Streptomyces venezuelae ATCC 10712]
          Length = 268

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 60/104 (57%), Gaps = 1/104 (0%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V++ ++  TG V+  QG   L Q G   F+  + +    REI  L+  + ++   G+   
Sbjct: 59  VMVAMTLFTGTVVGLQGYAALEQIGTAAFTGFVSAYFNTREIAPLVAGLALSATVGAGFT 118

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTI 272
           A++G+M+INEE+DA+  MG+  +  L++ RI A ++++ PL  I
Sbjct: 119 AQLGAMRINEEVDALEGMGIRSMPYLVTTRIIAGVVAIVPLYAI 162


>gi|15609102|ref|NP_216481.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis H37Rv]
 gi|15841440|ref|NP_336477.1| hypothetical protein MT2017 [Mycobacterium tuberculosis CDC1551]
 gi|148661774|ref|YP_001283297.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis H37Ra]
 gi|148823179|ref|YP_001287933.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis F11]
 gi|253798987|ref|YP_003031988.1| hypothetical protein TBMG_02025 [Mycobacterium tuberculosis KZN
           1435]
 gi|254232135|ref|ZP_04925462.1| hypothetical integral membrane protein yrbE3B [Mycobacterium
           tuberculosis C]
 gi|254364784|ref|ZP_04980830.1| hypothetical integral membrane protein yrbE3B [Mycobacterium
           tuberculosis str. Haarlem]
 gi|260201058|ref|ZP_05768549.1| hypothetical protein MtubT4_13284 [Mycobacterium tuberculosis T46]
 gi|289443449|ref|ZP_06433193.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           T46]
 gi|289570055|ref|ZP_06450282.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           T17]
 gi|289746096|ref|ZP_06505474.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis
           02_1987]
 gi|289750549|ref|ZP_06509927.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           T92]
 gi|289754062|ref|ZP_06513440.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis
           EAS054]
 gi|289758075|ref|ZP_06517453.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|289762120|ref|ZP_06521498.1| hypothetical integral membrane protein yrbE3B [Mycobacterium
           tuberculosis GM 1503]
 gi|294996887|ref|ZP_06802578.1| hypothetical protein Mtub2_20873 [Mycobacterium tuberculosis 210]
 gi|297634534|ref|ZP_06952314.1| hypothetical protein MtubK4_10446 [Mycobacterium tuberculosis KZN
           4207]
 gi|297731522|ref|ZP_06960640.1| hypothetical protein MtubKR_10551 [Mycobacterium tuberculosis KZN
           R506]
 gi|306776197|ref|ZP_07414534.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu001]
 gi|306779978|ref|ZP_07418315.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu002]
 gi|306784728|ref|ZP_07423050.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu003]
 gi|306789085|ref|ZP_07427407.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu004]
 gi|306793420|ref|ZP_07431722.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu005]
 gi|306797803|ref|ZP_07436105.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu006]
 gi|306803684|ref|ZP_07440352.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu008]
 gi|306808258|ref|ZP_07444926.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu007]
 gi|306968081|ref|ZP_07480742.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu009]
 gi|306972306|ref|ZP_07484967.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu010]
 gi|307080017|ref|ZP_07489187.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu011]
 gi|307084591|ref|ZP_07493704.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu012]
 gi|313658855|ref|ZP_07815735.1| hypothetical protein MtubKV_10561 [Mycobacterium tuberculosis KZN
           V2475]
 gi|2950435|emb|CAA17838.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE3B
           [Mycobacterium tuberculosis H37Rv]
 gi|13881679|gb|AAK46291.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|124601194|gb|EAY60204.1| hypothetical integral membrane protein yrbE3B [Mycobacterium
           tuberculosis C]
 gi|134150298|gb|EBA42343.1| hypothetical integral membrane protein yrbE3B [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148505926|gb|ABQ73735.1| conserved hypothetical integral membrane protein YrbE3b
           [Mycobacterium tuberculosis H37Ra]
 gi|148721706|gb|ABR06331.1| hypothetical integral membrane protein yrbE3B [Mycobacterium
           tuberculosis F11]
 gi|253320490|gb|ACT25093.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           KZN 1435]
 gi|289416368|gb|EFD13608.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           T46]
 gi|289543809|gb|EFD47457.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           T17]
 gi|289686624|gb|EFD54112.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis
           02_1987]
 gi|289691136|gb|EFD58565.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           T92]
 gi|289694649|gb|EFD62078.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis
           EAS054]
 gi|289709626|gb|EFD73642.1| hypothetical integral membrane protein yrbE3B [Mycobacterium
           tuberculosis GM 1503]
 gi|289713639|gb|EFD77651.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|308215377|gb|EFO74776.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu001]
 gi|308327132|gb|EFP15983.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu002]
 gi|308330568|gb|EFP19419.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu003]
 gi|308334402|gb|EFP23253.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu004]
 gi|308338198|gb|EFP27049.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu005]
 gi|308341893|gb|EFP30744.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu006]
 gi|308345382|gb|EFP34233.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu007]
 gi|308349685|gb|EFP38536.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu008]
 gi|308354315|gb|EFP43166.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu009]
 gi|308358257|gb|EFP47108.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu010]
 gi|308362185|gb|EFP51036.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu011]
 gi|308365842|gb|EFP54693.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu012]
 gi|323719530|gb|EGB28656.1| hypothetical protein TMMG_01226 [Mycobacterium tuberculosis
           CDC1551A]
 gi|326903572|gb|EGE50505.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           W-148]
 gi|328458742|gb|AEB04165.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           KZN 4207]
          Length = 271

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 109/228 (47%), Gaps = 13/228 (5%)

Query: 149 FKGFLLSLIRQMYY-VGV-----SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDL 202
           ++G LL +I QM    GV       V +V  ++  TGA++A QG  Q +  G E  +   
Sbjct: 35  YRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTGAIVAVQGYNQFASVGVEALTGFA 94

Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
            +    REI      V +A   G+   A +G+M+INEEIDA+  +G+  +  L S R+ A
Sbjct: 95  SAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINEEIDALEVIGIRSISYLASTRVLA 154

Query: 263 -LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMA 321
            +++++PL  +    +A + A +     Y     V+   F++     ++    ++   +A
Sbjct: 155 GVVVAVPLFCV-GLMTAYLAARVGTTAIYGQGSGVYDHYFNTFLRPTDVLWSSVEVVVVA 213

Query: 322 CAIGIVAMKEGFAVGVHSNSLGKKV-----TTCVVQSISIVIIIDSLF 364
             I +V    G+A       +G+ V      + VV SI+I+++  +++
Sbjct: 214 LMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASIAILVMTLAIY 261


>gi|284043171|ref|YP_003393511.1| hypothetical protein Cwoe_1709 [Conexibacter woesei DSM 14684]
 gi|283947392|gb|ADB50136.1| protein of unknown function DUF140 [Conexibacter woesei DSM 14684]
          Length = 264

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 7/208 (3%)

Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211
           F    +RQ   + +S   V+  + F+ G     +GA+     G   ++    +   LRE+
Sbjct: 36  FFGEALRQAGLLILSSTLVIWGLVFIIGLQCGIEGAYFTRGTGTPNYAGVFTAWCDLREL 95

Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271
                  M+A + G+ IVAEIGSM+I EEIDA+  MG+  +  L   R+ A  + LP + 
Sbjct: 96  VPYAFGYMMAAKVGTGIVAEIGSMRITEEIDALEVMGISSMTFLCGTRLLASWMVLPFVY 155

Query: 272 ILANFSAIIGASI-VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330
           I    +A I + + V+ + +++    +   F +     ++   L+K  FMA  I +V   
Sbjct: 156 IGGVGAAFIASYLAVVVQIHEVSAGGYELIFWAFQNPTDLLYSLLKGAFMATGIVVVGCY 215

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVI 358
            G+      N+ G  V      + S+V+
Sbjct: 216 YGY------NASGGPVGVGTATAKSMVV 237


>gi|119714949|ref|YP_921914.1| hypothetical protein Noca_0702 [Nocardioides sp. JS614]
 gi|119535610|gb|ABL80227.1| protein of unknown function DUF140 [Nocardioides sp. JS614]
          Length = 275

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 89/194 (45%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V++ ++F TGA +   G   L Q G   F+  + +    REI  L++ + +A   G  
Sbjct: 64  VGVILAMTFFTGAQVGLSGYAALDQLGTAAFAGFISAYFNTREIAPLVSGIALAATVGCG 123

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
             A++GSM+I+EE+DA+  M +  +  L++ RI   +I++  L ++   ++     + + 
Sbjct: 124 FTAQLGSMRISEEVDALEVMAIPSLPFLVTTRIVGGLIAIIPLYVVGLLASYFATRLTVT 183

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +++      +   F+S     ++     K    A  + ++    G+        +G  V 
Sbjct: 184 QFFGQSAGTYDHYFNSFLPPGDVLWSFGKVLVFAVTVILIHCYHGYTASGGPAGVGVAVG 243

Query: 348 TCVVQSISIVIIID 361
             V  SI  + +ID
Sbjct: 244 RAVRTSIVAINVID 257


>gi|326331737|ref|ZP_08198025.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
 gi|325950536|gb|EGD42588.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
          Length = 280

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 61/107 (57%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V+  ++F  G+ +  QG   LSQ G   FS  + +    RE+  L++++ +A   G  
Sbjct: 69  VGVIAFMAFFAGSEVGIQGYASLSQIGVAKFSAFISAFFNTREVAPLISSIALAATVGCG 128

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
             A +G+M+I+EEIDA+  MG+  +  L++ R+ A  +++  L I+A
Sbjct: 129 YTARLGAMRISEEIDALEAMGVPSLPYLVTTRMIAGFLAVIPLYIVA 175


>gi|300783702|ref|YP_003763993.1| ABC transporter permease [Amycolatopsis mediterranei U32]
 gi|299793216|gb|ADJ43591.1| ABC transport system permease protein [Amycolatopsis mediterranei
           U32]
          Length = 283

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 88/189 (46%), Gaps = 10/189 (5%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V+I ++  TG V+  QG   L+Q G   F+  + +    REI  L++ + ++   G    
Sbjct: 74  VMIGMTVATGTVVGLQGYSALNQVGTSAFAGFVSAYFNTREIAPLVSGLALSATVGCGFT 133

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTILANFSAIIGASIVIWK 288
           A++G+M+I+EEIDA+  MG+  V  L++ R+ A  ++ +PL  I    S +    I +W 
Sbjct: 134 AQLGAMRISEEIDALEVMGIPSVPYLVTTRVIAGFLAVIPLYAIGLLSSYLASRQITVWF 193

Query: 289 Y------YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
           +      YD  F +F        +   +    I      C  G  A      VGV   ++
Sbjct: 194 FGQSAGTYDHYFLLFLPPGDVLWSFGKVLVFSIVVVLAHCYYGFRASGGPAGVGV---AV 250

Query: 343 GKKVTTCVV 351
           G+ V T +V
Sbjct: 251 GRAVRTAIV 259


>gi|120401160|ref|YP_950989.1| hypothetical protein Mvan_0132 [Mycobacterium vanbaalenii PYR-1]
 gi|119953978|gb|ABM10983.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 265

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 36/210 (17%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P+ +L+ F    ++A+ GA  +S  GA I ++         ++G L+T +++AG   +A
Sbjct: 66  IPLTVLLIFTLNILLAEFGAADVSGAGAAIGAVT--------QLGPLVTVLVVAGAGSTA 117

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII--GASIV 285
           I A++G+  I EEIDA+  +G+D +  L+ PR+ A           + F AI+  GA I 
Sbjct: 118 ICADLGARTIREEIDALEVLGIDPIHRLVVPRVVA-----------STFVAILLNGAVIT 166

Query: 286 IWKYYDIPFAVFFSRFHSTATLA--NIFTGL-------IKAPFMACAIGIVAMKEGFAVG 336
           +       F V+     + A ++   + TGL       +KA       G+V    G  V 
Sbjct: 167 VGLVGGFIFGVYLQNVSAGAYVSTLTLITGLPEVVISIVKAATFGLIAGLVGCYRGLTVA 226

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
             +  +G  V        ++V+ + +LFA+
Sbjct: 227 GGAKGVGTAVNE------TLVLCVIALFAV 250


>gi|260186936|ref|ZP_05764410.1| hypothetical protein MtubCP_13018 [Mycobacterium tuberculosis
           CPHL_A]
          Length = 254

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 13/229 (5%)

Query: 148 KFKGFLLSLIRQMYY-VGV-----SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSID 201
            ++G LL +I QM    GV       V +V  ++  TGA++A QG  Q +  G E  +  
Sbjct: 17  HYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTGAIVAVQGYNQFASVGVEALTGF 76

Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261
             +    REI      V +A   G+   A +G+M+INEEIDA+  +G+  +  L S R+ 
Sbjct: 77  ASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINEEIDALEVIGIRSISYLASTRVL 136

Query: 262 A-LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320
           A +++++PL  +    +A + A +     Y     V+   F++     ++    ++   +
Sbjct: 137 AGVVVAVPLFCV-GLMTAYLAARVGTTAIYGQGSGVYDHYFNTFLRPTDVLWSSVEVVVV 195

Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKV-----TTCVVQSISIVIIIDSLF 364
           A  I +V    G+A       +G+ V      + VV SI+I+++  +++
Sbjct: 196 ALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASIAILVMTLAIY 244


>gi|257054989|ref|YP_003132821.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Saccharomonospora viridis
           DSM 43017]
 gi|256584861|gb|ACU95994.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Saccharomonospora viridis
           DSM 43017]
          Length = 281

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 10/189 (5%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V++ ++  TG V+  QG   L Q G   F+  + +    REI  L+  + ++   G    
Sbjct: 72  VMVGMTMFTGIVVGLQGYTALDQVGTAAFAGFISAYFNTREIAPLVAGLALSATVGCGFT 131

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTILANFSAIIGASIVIWK 288
           A++GSM+I+EEIDA+  MG+  V  L++ R+ A   + +PL  I    S +    I +W 
Sbjct: 132 AQLGSMRISEEIDALEVMGVPSVPYLVTTRVIAGFCAIIPLYAIGLLTSYVASRQITVWF 191

Query: 289 Y------YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
           Y      YD  F +F        +   +    +      C  G  A      VGV   ++
Sbjct: 192 YGQSEGTYDHYFELFLPPEDVLWSFGKVLLFSVVVVMTHCYYGFRASGGPAGVGV---AV 248

Query: 343 GKKVTTCVV 351
           G+ V T +V
Sbjct: 249 GRAVRTAIV 257


>gi|118619126|ref|YP_907458.1| integral membrane protein YrbE3B_1 [Mycobacterium ulcerans Agy99]
 gi|183984021|ref|YP_001852312.1| integral membrane protein YrbE3B_1 [Mycobacterium marinum M]
 gi|118571236|gb|ABL05987.1| conserved hypothetical integral membrane protein YrbE3B_1
           [Mycobacterium ulcerans Agy99]
 gi|183177347|gb|ACC42457.1| conserved hypothetical integral membrane protein YrbE3B_1
           [Mycobacterium marinum M]
          Length = 284

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 75/139 (53%), Gaps = 7/139 (5%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V +V  ++  TGA++A QG    S+ G E  +    +   +R I    TA+ ++   G+ 
Sbjct: 73  VAIVGFLTVTTGALVAVQGYSDFSELGVEALTGFASAFFNVRLIAPATTAIALSATIGAG 132

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL--LTILANFSAIIGASI 284
             A++G+M+IN+EIDA+  MG+  +  L + R+ A L++ +PL  + +LA+F A    + 
Sbjct: 133 ATAQLGAMRINDEIDALEVMGIRTIAFLAASRVVAGLLVVIPLYCVGVLASFWAARFGTT 192

Query: 285 VIWKY----YDIPFAVFFS 299
           V++      YD  F  F +
Sbjct: 193 VLYSQATGVYDHYFRTFLN 211


>gi|145225118|ref|YP_001135796.1| hypothetical protein Mflv_4540 [Mycobacterium gilvum PYR-GCK]
 gi|145217604|gb|ABP47008.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
          Length = 270

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 104/216 (48%), Gaps = 31/216 (14%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L+SF    ++++ GA  LS  GA   ++         ++G ++T +++AG   +A
Sbjct: 71  IPFTVLVSFTLNILLSELGAADLSGAGAAFGAVT--------QVGPMVTVLIVAGAGATA 122

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + A++GS  I EEIDA+  +G++ V+ L++PR+ A  +   LL  L     I+G  +   
Sbjct: 123 MCADLGSRTIREEIDALEVLGINPVQRLVTPRMLASGLVALLLNSLVVIIGIVGGYV--- 179

Query: 288 KYYDIPFAVFFSRFHSTATLANI--FTGL-------IKAPFMACAIGIVAMKEGFAVGV- 337
                 F++F    +  A  A I   TG+       +KA       G+VA   G ++   
Sbjct: 180 ------FSIFVQGVNPGAFAAGITLLTGVPEVIISCVKAALFGLIAGLVACYRGLSISTG 233

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
            + ++G  V   VV +   + +++    +   AIGI
Sbjct: 234 GAKAVGNAVNETVVYAFMALFVVN----VVVTAIGI 265


>gi|167970513|ref|ZP_02552790.1| hypothetical integral membrane protein yrbE3B [Mycobacterium
           tuberculosis H37Ra]
 gi|215404241|ref|ZP_03416422.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis
           02_1987]
 gi|215411647|ref|ZP_03420443.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis
           94_M4241A]
 gi|215427324|ref|ZP_03425243.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis T92]
 gi|215430875|ref|ZP_03428794.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis
           EAS054]
 gi|215446168|ref|ZP_03432920.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis T85]
 gi|218753677|ref|ZP_03532473.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis GM
           1503]
 gi|219557919|ref|ZP_03536995.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis T17]
 gi|254550985|ref|ZP_05141432.1| hypothetical protein Mtube_11071 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|289447582|ref|ZP_06437326.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           CPHL_A]
 gi|298525459|ref|ZP_07012868.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|289420540|gb|EFD17741.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           CPHL_A]
 gi|298495253|gb|EFI30547.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
          Length = 258

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 13/229 (5%)

Query: 148 KFKGFLLSLIRQMYY-VGV-----SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSID 201
            ++G LL +I QM    GV       V +V  ++  TGA++A QG  Q +  G E  +  
Sbjct: 21  HYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTGAIVAVQGYNQFASVGVEALTGF 80

Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261
             +    REI      V +A   G+   A +G+M+INEEIDA+  +G+  +  L S R+ 
Sbjct: 81  ASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINEEIDALEVIGIRSISYLASTRVL 140

Query: 262 A-LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320
           A +++++PL  +    +A + A +     Y     V+   F++     ++    ++   +
Sbjct: 141 AGVVVAVPLFCV-GLMTAYLAARVGTTAIYGQGSGVYDHYFNTFLRPTDVLWSSVEVVVV 199

Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKV-----TTCVVQSISIVIIIDSLF 364
           A  I +V    G+A       +G+ V      + VV SI+I+++  +++
Sbjct: 200 ALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASIAILVMTLAIY 248


>gi|289554258|ref|ZP_06443468.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           KZN 605]
 gi|289438890|gb|EFD21383.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           KZN 605]
          Length = 247

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 13/229 (5%)

Query: 148 KFKGFLLSLIRQMYY-VGV-----SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSID 201
            ++G LL +I QM    GV       V +V  ++  TGA++A QG  Q +  G E  +  
Sbjct: 10  HYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTGAIVAVQGYNQFASVGVEALTGF 69

Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261
             +    REI      V +A   G+   A +G+M+INEEIDA+  +G+  +  L S R+ 
Sbjct: 70  ASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINEEIDALEVIGIRSISYLASTRVL 129

Query: 262 A-LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320
           A +++++PL  +    +A + A +     Y     V+   F++     ++    ++   +
Sbjct: 130 AGVVVAVPLFCV-GLMTAYLAARVGTTAIYGQGSGVYDHYFNTFLRPTDVLWSSVEVVVV 188

Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKV-----TTCVVQSISIVIIIDSLF 364
           A  I +V    G+A       +G+ V      + VV SI+I+++  +++
Sbjct: 189 ALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASIAILVMTLAIY 237


>gi|41410180|ref|NP_963016.1| hypothetical protein MAP4082 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|254776985|ref|ZP_05218501.1| hypothetical protein MaviaA2_20271 [Mycobacterium avium subsp.
           avium ATCC 25291]
 gi|41399014|gb|AAS06632.1| hypothetical protein MAP_4082 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 265

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 24/204 (11%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P+ +LI F    ++A+ GA  +S  GA + ++         ++G L T ++IAG   +A
Sbjct: 66  IPLTVLIIFTLNILLAEFGAADISGAGAALGAVT--------QLGPLTTVLVIAGAGSTA 117

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+  I EEIDA+  +G+D +  L+ PR+ A  I   LL          GA I I 
Sbjct: 118 ICADLGARTIREEIDALEVLGIDPIHRLVVPRVVAATIVATLLN---------GAVITIG 168

Query: 288 KYYDIPFAVFFSRFHSTATLA--NIFTGL---IKAPFMACAIGIVAMKEGFAVGVHSNSL 342
                 F VF     + A +    + TGL   + +   +   G +A   G   G+ +   
Sbjct: 169 LVGGFVFGVFIQHISAGAYVGTLTLITGLPEVVISVVKSATFGTIAGLVGCYRGLTTKGG 228

Query: 343 GKKVTTCVVQSISIVIIIDSLFAI 366
            K V T V +++ + +I  +LFA+
Sbjct: 229 PKGVGTAVNETLVLCVI--ALFAV 250


>gi|255534289|ref|YP_003094660.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Flavobacteriaceae
           bacterium 3519-10]
 gi|255340485|gb|ACU06598.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Flavobacteriaceae
           bacterium 3519-10]
          Length = 250

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 67/120 (55%), Gaps = 9/120 (7%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSID------LMSILQLRE 210
           +R+++ +GV+   +V+  S   GAV+A Q     + F A  F I          ++ + E
Sbjct: 34  MREIHDLGVNSFGLVLFTSTFVGAVVAIQ---MFNNFSASSFPIPNSFIGYATKVVLILE 90

Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
               + +V++AG+ GS I + IG+M++ E+IDA+  MG++    LI P+I A II  PLL
Sbjct: 91  FAPTIISVILAGKVGSYIASSIGTMRVTEQIDALDIMGVNSPNFLILPKILASIIFNPLL 150


>gi|312141009|ref|YP_004008345.1| integral membrane protein yrbe4b [Rhodococcus equi 103S]
 gi|325675354|ref|ZP_08155038.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Rhodococcus equi ATCC 33707]
 gi|311890348|emb|CBH49666.1| putative integral membrane protein YrbE4B [Rhodococcus equi 103S]
 gi|325553325|gb|EGD23003.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Rhodococcus equi ATCC 33707]
          Length = 286

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 67/116 (57%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V++++S  TG V+  QG   L Q G+ + +  L + +  REI  ++ A+ ++   G    
Sbjct: 77  VIVMMSGFTGVVVGLQGFAALDQLGSSVLTGFLSAYVNTREIAPIVAALALSATVGCGFT 136

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           A++G+M+I+EEIDA+  M +  V  L++ R+ A  +++  L I+   +A + + +V
Sbjct: 137 AQLGAMRISEEIDALEVMAVPSVPFLVTTRMIAGFVAVIPLYIVGLLAAYLASRVV 192


>gi|118466592|ref|YP_883684.1| hypothetical protein MAV_4553 [Mycobacterium avium 104]
 gi|118167879|gb|ABK68776.1| conserved hypothetical protein [Mycobacterium avium 104]
          Length = 260

 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 24/204 (11%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P+ +LI F    ++A+ GA  +S  GA + ++         ++G L T ++IAG   +A
Sbjct: 61  IPLTVLIIFTLNILLAEFGAADISGAGAALGAVT--------QLGPLTTVLVIAGAGSTA 112

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+  I EEIDA+  +G+D +  L+ PR+ A  I   LL          GA I I 
Sbjct: 113 ICADLGARTIREEIDALEVLGIDPIHRLVVPRVVAATIVATLLN---------GAVITIG 163

Query: 288 KYYDIPFAVFFSRFHSTATLA--NIFTGL---IKAPFMACAIGIVAMKEGFAVGVHSNSL 342
                 F VF     + A +    + TGL   + +   +   G +A   G   G+ +   
Sbjct: 164 LVGGFVFGVFIQHISAGAYVGTLTLITGLPEVVISVVKSATFGTIAGLVGCYRGLTTKGG 223

Query: 343 GKKVTTCVVQSISIVIIIDSLFAI 366
            K V T V +++ + +I  +LFA+
Sbjct: 224 PKGVGTAVNETLVLCVI--ALFAV 245


>gi|315445485|ref|YP_004078364.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|315263788|gb|ADU00530.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 270

 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 104/216 (48%), Gaps = 31/216 (14%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L+SF    ++++ GA  LS  GA   ++         ++G ++T +++AG   +A
Sbjct: 71  IPFTVLVSFTLNILLSELGAADLSGAGAAFGAVT--------QVGPMVTVLIVAGAGATA 122

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + A++GS  I EEIDA+  +G++ V+ L++PR+ A  +   LL  L     I+G  +   
Sbjct: 123 MCADLGSRTIREEIDALEVLGINPVQRLVTPRMLASGLVALLLNSLVVIIGIVGGYV--- 179

Query: 288 KYYDIPFAVFFSRFHSTATLANI--FTGL-------IKAPFMACAIGIVAMKEGFAVGV- 337
                 F++F    +  A  A I   TG+       +KA       G+VA   G ++   
Sbjct: 180 ------FSIFVQGVNPGAFAAGITLLTGVPEVIISCVKAALFGLIAGLVACYRGLSISTG 233

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
            + ++G  V   VV +   + +++    +   AIGI
Sbjct: 234 GAKAVGNAVNETVVYAFMALFVVN----VVVTAIGI 265


>gi|291614199|ref|YP_003524356.1| hypothetical protein Slit_1738 [Sideroxydans lithotrophicus ES-1]
 gi|291584311|gb|ADE11969.1| protein of unknown function DUF140 [Sideroxydans lithotrophicus
           ES-1]
          Length = 260

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 2/208 (0%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           RQ+++ GV  + +V +   ++GA++  Q    +   G    ++ ++    +RE+G L  A
Sbjct: 49  RQIFFTGVEALRIVAVFGLLSGALVITQITSLVG--GDSELTVKILIWTLVREVGPLFAA 106

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++I  RS +AI +E+  MK   E+ ++  MG+     L+ PRI  + +++  LTI     
Sbjct: 107 IIIIARSSAAIASELALMKTRHEMTSLYRMGIPPQDYLLVPRIAGVTLAVLGLTIYFQVV 166

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           AI G   +   + ++ +     RF  T  L+       K      AI  ++   G     
Sbjct: 167 AIGGGLAISAMFQNVSYLDQVGRFLQTVKLSEFAVVAFKGCLFGLAISTISCYNGMQAQP 226

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFA 365
               + K     V+QS+  V  +D++ A
Sbjct: 227 SVTEVPKVAIKAVLQSLLFVFTLDAVIA 254


>gi|296165083|ref|ZP_06847636.1| integral membrane protein YRBE1A [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295899576|gb|EFG79029.1| integral membrane protein YRBE1A [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 264

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 9/203 (4%)

Query: 149 FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL 208
           + G+ L  +  +  + VS +P  +L+ F    ++A+ GA  +S  GA I ++        
Sbjct: 47  WNGWFLMRVSLLPTIAVS-IPETVLLIFTLNLLLAEIGAADVSGAGAAIGAVT------- 98

Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268
            ++G ++T +++AG  G+AI A++G+  I EEIDA+  +G+D +  L+ PR+ A  +   
Sbjct: 99  -QLGPIVTVLVVAGAGGTAICADLGARTIREEIDALEVLGIDPIHRLVVPRVVASTMVAV 157

Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328
           LL  L     + G  +      ++    + S   +   L  +    IKA       G+V 
Sbjct: 158 LLNGLVVAVGLGGGYLFSVYLQNVSSGAYLSTLTALTGLPEVVIAFIKAATFGLIAGLVG 217

Query: 329 MKEGFAVGVHSNSLGKKVTTCVV 351
              G  V   S  LG  V   VV
Sbjct: 218 CYRGLIVRGGSKGLGTAVNETVV 240


>gi|117164592|emb|CAJ88138.1| putative ABC-transporter integral membrane protein [Streptomyces
           ambofaciens ATCC 23877]
          Length = 268

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 59/103 (57%), Gaps = 1/103 (0%)

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           +I ++  TG V+  QG   L Q G   F+  + +    REI  L+  + ++   G+   A
Sbjct: 60  MIAMTLFTGTVVGLQGYAALDQIGTAAFTGFVSAYFNTREIAPLVAGLALSATVGAGFTA 119

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTI 272
           ++G+M+INEE+DA+  MG+  +  L++ RI A +++ +PL  I
Sbjct: 120 QLGAMRINEEVDALEGMGIRSLPYLVTTRIIAGVVAIIPLYAI 162


>gi|167753066|ref|ZP_02425193.1| hypothetical protein ALIPUT_01336 [Alistipes putredinis DSM 17216]
 gi|167659380|gb|EDS03510.1| hypothetical protein ALIPUT_01336 [Alistipes putredinis DSM 17216]
          Length = 247

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 74/135 (54%), Gaps = 9/135 (6%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL- 214
           +I +M  +G++ + +  +IS   GAVI  Q +  L       + I   +    RE  +L 
Sbjct: 32  IIYEMESLGLNSIGLTAIISVFIGAVITLQMSINLESPFIPKYIIGYAT----RETMILE 87

Query: 215 ----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
               + A+++AG+ GS+I +EIG+M+I E+IDA+  MG++    LI P+I A ++  P L
Sbjct: 88  FSSTVVALILAGKVGSSIASEIGTMRITEQIDALEIMGVNSASYLILPKIVATVLFFPFL 147

Query: 271 TILANFSAIIGASIV 285
            IL+    I G  ++
Sbjct: 148 AILSILIGIAGGYLI 162


>gi|305664611|ref|YP_003860898.1| hypothetical protein FB2170_17306 [Maribacter sp. HTCC2170]
 gi|88708628|gb|EAR00864.1| hypothetical protein FB2170_17306 [Maribacter sp. HTCC2170]
          Length = 265

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 98/206 (47%), Gaps = 28/206 (13%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ----LREIGVLLTAVMIAGRSG 225
           ++I ISF  G V+A Q A  ++   +E+   +L+        + E      ++++AG+ G
Sbjct: 65  ILIFISFFIGGVVAIQTALNIT---SELIPKNLVGFATRQSIILEFAPTFCSIIMAGKVG 121

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           S I + IG+M++ E+IDA+  MG++ +  L+ P+I AL++  P +  ++ +  I G    
Sbjct: 122 SYITSSIGTMRVTEQIDALEVMGVNALNYLVFPKIIALLL-YPFIIAISMYVGIFGG--- 177

Query: 286 IWKYYDIPFAVFFSRFHSTATLA----------NIFTGLIKAPFMACAIGIVAMKEGFAV 335
            W      FA  F  F ++A             ++    IK    A  +  +    GF +
Sbjct: 178 -W------FAGVFGGFSTSADFVEGVQLDFIPFHVTYSFIKTLVFAFILATIPSYHGFYM 230

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361
              +  +GK  TT  V +  ++II++
Sbjct: 231 KGGALEVGKAATTSFVWTSVVIIILN 256


>gi|326333402|ref|ZP_08199648.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
 gi|325948798|gb|EGD40892.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
          Length = 275

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/199 (22%), Positives = 90/199 (45%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V++ ++F TGA +   G   L Q G   FS  + +    REI  L+  + +A   G  
Sbjct: 64  VGVILAMTFFTGAQVGLSGYTALDQLGTSAFSGFVSAYFNTREIAPLVAGIALAATVGCG 123

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
             A++G+M+I+EE+DA+  M +  +  L++ R+   +I++  L ++   S+ +     + 
Sbjct: 124 FTAQLGAMRISEEVDALEVMAIPSLPFLVTTRMIGGLIAIVPLYVVGLLSSYVATRFTVI 183

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
            +Y      +   F++     ++     K    A  + ++    G+        +G  V 
Sbjct: 184 LFYGQSAGTYDHYFNTFLPPVDVLWSFGKVLIFAVVVILIHCYHGYNASGGPAGVGVAVG 243

Query: 348 TCVVQSISIVIIIDSLFAI 366
             V  SI  V ++D + ++
Sbjct: 244 KAVRTSIVAVSVLDLMLSM 262


>gi|326382401|ref|ZP_08204093.1| hypothetical protein SCNU_05666 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326199131|gb|EGD56313.1| hypothetical protein SCNU_05666 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 245

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 105/206 (50%), Gaps = 1/206 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +++  + + V+ +P  IL++   G +++ Q      Q GA   +     +  +++   ++
Sbjct: 25  VVQTWFVITVTTLPA-ILVAIPFGVIVSVQVGSLTQQVGATSIAGAAGGLGIIQQGAPIV 83

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA+++ G +GSAI +++G+  + EEIDA+ T+GL+  R +++PR  A++I  P+L +L  
Sbjct: 84  TALLLGGAAGSAIASDLGARTVREEIDAMETLGLNPTRRVVAPRFVAVLIVAPMLCMLIV 143

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
           F+ ++   I+      I    + + F S A+ A+I   LIK+      +  +A   G + 
Sbjct: 144 FTGLVAGYILSVNVQGITPGSYVASFASFASSADIVVALIKSVVFGLVVVAIACHRGLST 203

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361
                 + + V   VV  +    +I+
Sbjct: 204 KGGPKGVAESVNATVVLGVVACFVIN 229


>gi|256820380|ref|YP_003141659.1| hypothetical protein Coch_1553 [Capnocytophaga ochracea DSM 7271]
 gi|315223460|ref|ZP_07865317.1| ABC superfamily ATP binding cassette transporter permease protein
           [Capnocytophaga ochracea F0287]
 gi|256581963|gb|ACU93098.1| protein of unknown function DUF140 [Capnocytophaga ochracea DSM
           7271]
 gi|314946633|gb|EFS98624.1| ABC superfamily ATP binding cassette transporter permease protein
           [Capnocytophaga ochracea F0287]
          Length = 245

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 63/114 (55%), Gaps = 2/114 (1%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTAVMIAGRSGSAI 228
           +V  ISF  G V+A Q A  +       + I   +   +  E     TA+++AG+ GS I
Sbjct: 45  IVTFISFFVGGVVAVQTALNIDNPFIPKYLIGFATRQSIVLEFAPTFTAIILAGKIGSFI 104

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
            + IG+M++ E+IDA+  MG++ V  L+ P+I AL++ +P L  L  +  ++G 
Sbjct: 105 TSSIGTMRVTEQIDALDIMGVNSVNYLVFPKIVALML-MPFLIALGMYLGVLGG 157


>gi|126436263|ref|YP_001071954.1| hypothetical protein Mjls_3686 [Mycobacterium sp. JLS]
 gi|126236063|gb|ABN99463.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 270

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 27/206 (13%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L+SF    ++ + GA  LS  GA   ++         ++G L+T +++AG   +A
Sbjct: 71  IPFTVLVSFTLNILLRELGAADLSGAGAAFGAVT--------QVGPLVTVLIVAGAGATA 122

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + A++GS  I EEI A+  +G+D V+ L++PR+ A  +   LL  L     I+G      
Sbjct: 123 MCADLGSRTIREEISAMEVLGIDPVQRLVTPRMLASGLVALLLNSLVVIIGILGGYT--- 179

Query: 288 KYYDIPFAVFFSRFHSTATLANI--FTGL-------IKAPFMACAIGIVAMKEGFAV-GV 337
                 F+VF    +  A  A I   TG+       +KA       G+VA   G  V G 
Sbjct: 180 ------FSVFIQDVNPGAFAAGITLLTGVPEMIISCVKALLFGLIAGLVACYRGLTVSGG 233

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSL 363
            + ++G  V   VV +   +  I+ L
Sbjct: 234 GAKAVGNAVNETVVYAFMALFAINVL 259


>gi|256380616|ref|YP_003104276.1| hypothetical protein Amir_6633 [Actinosynnema mirum DSM 43827]
 gi|255924919|gb|ACU40430.1| protein of unknown function DUF140 [Actinosynnema mirum DSM 43827]
          Length = 279

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 64/112 (57%), Gaps = 3/112 (2%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V++ +S  TG V+  QG   L Q G   F+  + +    REI  L+  + ++   GS   
Sbjct: 70  VMVGLSVFTGTVVGLQGFTALDQIGTSAFAGFVSAYFNTREIAPLVAGLALSATVGSGFT 129

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRI---WALIISLPLLTILANFSA 278
           A++G+M+I+EEIDA+  MG+  +  L++ RI   +A I+ L ++ +L ++ A
Sbjct: 130 AQLGAMRISEEIDALEVMGVPSLPYLVTTRIVAGFAAIVPLYVIGLLTSYLA 181


>gi|15609101|ref|NP_216480.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis H37Rv]
 gi|15841439|ref|NP_336476.1| hypothetical protein MT2016 [Mycobacterium tuberculosis CDC1551]
 gi|148661773|ref|YP_001283296.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis H37Ra]
 gi|167970514|ref|ZP_02552791.1| conserved hypothetical integral membrane protein YrbE3A
           [Mycobacterium tuberculosis H37Ra]
 gi|215411646|ref|ZP_03420442.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           94_M4241A]
 gi|215427323|ref|ZP_03425242.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis T92]
 gi|215430874|ref|ZP_03428793.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           EAS054]
 gi|215446167|ref|ZP_03432919.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis T85]
 gi|219557918|ref|ZP_03536994.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis T17]
 gi|254232134|ref|ZP_04925461.1| hypothetical integral membrane protein yrbE3A [Mycobacterium
           tuberculosis C]
 gi|254364783|ref|ZP_04980829.1| hypothetical integral membrane protein yrbE3A [Mycobacterium
           tuberculosis str. Haarlem]
 gi|260186935|ref|ZP_05764409.1| hypothetical protein MtubCP_13013 [Mycobacterium tuberculosis
           CPHL_A]
 gi|260201057|ref|ZP_05768548.1| hypothetical protein MtubT4_13279 [Mycobacterium tuberculosis T46]
 gi|289443448|ref|ZP_06433192.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis
           T46]
 gi|289447581|ref|ZP_06437325.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis
           CPHL_A]
 gi|289554259|ref|ZP_06443469.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis KZN
           605]
 gi|289570054|ref|ZP_06450281.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis
           T17]
 gi|289746097|ref|ZP_06505475.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           02_1987]
 gi|289750548|ref|ZP_06509926.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis
           T92]
 gi|289754061|ref|ZP_06513439.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
 gi|289758074|ref|ZP_06517452.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|289762119|ref|ZP_06521497.1| hypothetical integral membrane protein yrbE3A [Mycobacterium
           tuberculosis GM 1503]
 gi|294996886|ref|ZP_06802577.1| hypothetical protein Mtub2_20868 [Mycobacterium tuberculosis 210]
 gi|297731521|ref|ZP_06960639.1| hypothetical protein MtubKR_10546 [Mycobacterium tuberculosis KZN
           R506]
 gi|298525458|ref|ZP_07012867.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|306776196|ref|ZP_07414533.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu001]
 gi|306784727|ref|ZP_07423049.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu003]
 gi|306803683|ref|ZP_07440351.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu008]
 gi|306968080|ref|ZP_07480741.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu009]
 gi|306972305|ref|ZP_07484966.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu010]
 gi|307080016|ref|ZP_07489186.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu011]
 gi|307084590|ref|ZP_07493703.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu012]
 gi|308369573|ref|ZP_07418314.2| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu002]
 gi|308372102|ref|ZP_07427406.2| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu004]
 gi|308373284|ref|ZP_07431721.2| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu005]
 gi|308374452|ref|ZP_07436104.2| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu006]
 gi|308375733|ref|ZP_07444925.2| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu007]
 gi|313658854|ref|ZP_07815734.1| hypothetical protein MtubKV_10556 [Mycobacterium tuberculosis KZN
           V2475]
 gi|2950434|emb|CAA17837.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE3A
           [Mycobacterium tuberculosis H37Rv]
 gi|13881678|gb|AAK46290.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|124601193|gb|EAY60203.1| hypothetical integral membrane protein yrbE3A [Mycobacterium
           tuberculosis C]
 gi|134150297|gb|EBA42342.1| hypothetical integral membrane protein yrbE3A [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148505925|gb|ABQ73734.1| conserved hypothetical integral membrane protein YrbE3A
           [Mycobacterium tuberculosis H37Ra]
 gi|289416367|gb|EFD13607.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis
           T46]
 gi|289420539|gb|EFD17740.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis
           CPHL_A]
 gi|289438891|gb|EFD21384.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis KZN
           605]
 gi|289543808|gb|EFD47456.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis
           T17]
 gi|289686625|gb|EFD54113.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           02_1987]
 gi|289691135|gb|EFD58564.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis
           T92]
 gi|289694648|gb|EFD62077.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
 gi|289709625|gb|EFD73641.1| hypothetical integral membrane protein yrbE3A [Mycobacterium
           tuberculosis GM 1503]
 gi|289713638|gb|EFD77650.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|298495252|gb|EFI30546.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|308215376|gb|EFO74775.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu001]
 gi|308327131|gb|EFP15982.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu002]
 gi|308330567|gb|EFP19418.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu003]
 gi|308334401|gb|EFP23252.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu004]
 gi|308338197|gb|EFP27048.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu005]
 gi|308341892|gb|EFP30743.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu006]
 gi|308345381|gb|EFP34232.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu007]
 gi|308349684|gb|EFP38535.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu008]
 gi|308354314|gb|EFP43165.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu009]
 gi|308358256|gb|EFP47107.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu010]
 gi|308362184|gb|EFP51035.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu011]
 gi|308365841|gb|EFP54692.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu012]
 gi|323719529|gb|EGB28655.1| hypothetical protein TMMG_01225 [Mycobacterium tuberculosis
           CDC1551A]
 gi|326903571|gb|EGE50504.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis
           W-148]
 gi|328458743|gb|AEB04166.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis KZN
           4207]
          Length = 265

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 89/173 (51%), Gaps = 2/173 (1%)

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L+  GA  FS    +I  + +   ++T +++AG   +A+ A++G+  I EE+DA+R MG+
Sbjct: 81  LTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVMGI 140

Query: 250 DFVRILISPRIW-ALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           + ++ L +PR+  A  +SL L +++   + +IGA         +    + +   +     
Sbjct: 141 NPIQALAAPRVLAATTVSLALNSVVTA-TGLIGAFFCSVFLMHVSAGAWVTGLTTLTHTV 199

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           ++   +IKA       G++A  +G +VG     +G+ V   VV +  ++ +I+
Sbjct: 200 DVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVIN 252


>gi|319950492|ref|ZP_08024405.1| putative YrbE family protein [Dietzia cinnamea P4]
 gi|319435851|gb|EFV91058.1| putative YrbE family protein [Dietzia cinnamea P4]
          Length = 285

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 94/189 (49%), Gaps = 10/189 (5%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V++++S  TG V+  QG   L Q G+ + +  L + +  RE+  ++ ++ ++   G    
Sbjct: 76  VIVMMSGFTGVVVGLQGYAALDQIGSSVLTGFLSAYVNTREVAPVVASLALSATVGCGFT 135

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWA---LIISLPLLTILANFSAIIGASIVI 286
           A++G+M+I+EEIDA+  M +  V  L++ R+ A    +I L ++ +L+++ A  G + +I
Sbjct: 136 AQLGAMRISEEIDALEVMAIPSVPYLVTTRVIAGFIAVIPLYVVGLLSSYLATRGVNTMI 195

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF----MACAIGIVAMKEGFAVGVHSNSL 342
                  F  +F  F     +   F  +I   F    + C  G  A      VGV   ++
Sbjct: 196 QGQSTGSFDHYFHLFLPPEDVIYSFIKVIIFAFVLVMIHCYYGYTASGGPAGVGV---AV 252

Query: 343 GKKVTTCVV 351
           G+ V T +V
Sbjct: 253 GRAVRTTIV 261


>gi|269128542|ref|YP_003301912.1| hypothetical protein Tcur_4347 [Thermomonospora curvata DSM 43183]
 gi|268313500|gb|ACY99874.1| protein of unknown function DUF140 [Thermomonospora curvata DSM
           43183]
          Length = 282

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 93/191 (48%), Gaps = 10/191 (5%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V +V  ++F TG+ +  QG   L+Q G   ++  + S    RE+  L++A+ ++   G  
Sbjct: 71  VAIVGFMTFFTGSQVGLQGYNSLNQIGTAAYTGFVSSYFNTRELAPLVSALALSATVGCG 130

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
             A++G+M+I++EIDA+  M +  V  L++ R+ A +I++  L ++   ++ +   +++ 
Sbjct: 131 FTAQLGAMRISDEIDALEVMAVPTVPFLVTTRLLAGMIAVIPLYVVGLLASYLATRLIVT 190

Query: 288 KY-------YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
            +       YD  F +F   +    +   +    I    + C  G  A      VGV   
Sbjct: 191 VFYGQSTGTYDHYFNLFLPPYDILWSFGKVIVFAILVMLIHCYYGFHASGGPAGVGV--- 247

Query: 341 SLGKKVTTCVV 351
           ++G+ V T +V
Sbjct: 248 AVGRAVRTSIV 258


>gi|108800639|ref|YP_640836.1| hypothetical protein Mmcs_3673 [Mycobacterium sp. MCS]
 gi|119869778|ref|YP_939730.1| hypothetical protein Mkms_3746 [Mycobacterium sp. KMS]
 gi|108771058|gb|ABG09780.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
 gi|119695867|gb|ABL92940.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
          Length = 270

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 27/206 (13%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L+SF    ++ + GA  LS  GA   ++         ++G L+T +++AG   +A
Sbjct: 71  IPFTVLVSFTLNILLRELGAADLSGAGAAFGAVT--------QVGPLVTVLIVAGAGATA 122

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + A++GS  I EEI A+  +G+D V+ L++PR+ A  +   LL  L     I+G      
Sbjct: 123 MCADLGSRTIREEISAMEVLGIDPVQRLVTPRMLASGLVALLLNSLVVIIGILGG----- 177

Query: 288 KYYDIPFAVFFSRFHSTATLANI--FTGL-------IKAPFMACAIGIVAMKEGFAV-GV 337
             Y   F+VF    +  A  A I   TG+       +KA       G+VA   G  V G 
Sbjct: 178 --YT--FSVFIQDVNPGAFAAGITLLTGVPEMIISCVKALLFGLIAGLVACYRGLTVSGG 233

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSL 363
            + ++G  V   VV +   +  I+ L
Sbjct: 234 GAKAVGNAVNETVVYAFMALFAINVL 259


>gi|120406152|ref|YP_955981.1| hypothetical protein Mvan_5204 [Mycobacterium vanbaalenii PYR-1]
 gi|119958970|gb|ABM15975.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 237

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 26/203 (12%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L++F    ++ + GA  LS  G    +I         ++G ++T +++AG   +A
Sbjct: 39  IPFTVLVAFTLNILLREIGAADLSGAGTAFGTIT--------QLGPVVTVLVVAGAGATA 90

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+  I EEIDA+R +G+D ++ L+ PR+ A      LL  L     + G  +   
Sbjct: 91  ICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLASTFVALLLNGLVCLIGLSGGYV--- 147

Query: 288 KYYDIPFAVFFSRFHSTATL--ANIFTGL-------IKAPFMACAIGIVAMKEGFAVGVH 338
                 F+VF    +  A +    + TGL       IKA       G+V    G  V   
Sbjct: 148 ------FSVFLQGVNPGAFINGLTVLTGLGELVLAEIKALLFGVVAGLVGCYRGLTVKGG 201

Query: 339 SNSLGKKVTTCVVQSISIVIIID 361
              +G  V   VV +   + +I+
Sbjct: 202 PKGVGNAVNETVVYAFICLFVIN 224


>gi|215404242|ref|ZP_03416423.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           02_1987]
 gi|218753676|ref|ZP_03532472.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis GM
           1503]
 gi|253798988|ref|YP_003031989.1| hypothetical protein TBMG_02026 [Mycobacterium tuberculosis KZN
           1435]
 gi|254550984|ref|ZP_05141431.1| hypothetical protein Mtube_11066 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|297634533|ref|ZP_06952313.1| hypothetical protein MtubK4_10441 [Mycobacterium tuberculosis KZN
           4207]
 gi|253320491|gb|ACT25094.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis
           KZN 1435]
          Length = 269

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 89/173 (51%), Gaps = 2/173 (1%)

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L+  GA  FS    +I  + +   ++T +++AG   +A+ A++G+  I EE+DA+R MG+
Sbjct: 85  LTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVMGI 144

Query: 250 DFVRILISPRIW-ALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           + ++ L +PR+  A  +SL L +++   + +IGA         +    + +   +     
Sbjct: 145 NPIQALAAPRVLAATTVSLALNSVVTA-TGLIGAFFCSVFLMHVSAGAWVTGLTTLTHTV 203

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           ++   +IKA       G++A  +G +VG     +G+ V   VV +  ++ +I+
Sbjct: 204 DVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVIN 256


>gi|291279860|ref|YP_003496695.1| ABC transporter permease [Deferribacter desulfuricans SSM1]
 gi|290754562|dbj|BAI80939.1| ABC transporter, permease [Deferribacter desulfuricans SSM1]
          Length = 258

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 73/130 (56%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +RQ+Y+ GV  +P+ I IS + G  +    +  L   G       L+ +L +RE+G L+T
Sbjct: 48  LRQVYFTGVQILPIYIFISLIFGIALVGILSKLLIDLGIYNELGKLLVLLIVRELGPLVT 107

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
            ++++ RS +A+ AEI  MK++ EI+ +    +D +  L  PR+ A +  +  L+I  +F
Sbjct: 108 VILLSLRSSTAVGAEISVMKLSGEIETLTFFEIDPLIYLFLPRVLAGLTCMVSLSIFFSF 167

Query: 277 SAIIGASIVI 286
            +I G  ++I
Sbjct: 168 VSITGGYLLI 177


>gi|296139954|ref|YP_003647197.1| hypothetical protein Tpau_2249 [Tsukamurella paurometabola DSM
           20162]
 gi|296028088|gb|ADG78858.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM
           20162]
          Length = 279

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 76/142 (53%), Gaps = 13/142 (9%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V VV+++   TG V+  QG   L Q GA + +  L + +  RE+  L+ A+ ++   G  
Sbjct: 69  VGVVLMLCGFTGIVVGLQGNAALQQLGASVMTGFLSAYVNTRELTPLVAALAMSATVGCG 128

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA---LIISLPLLTILANF-------S 277
             A++G+M+I+EEIDA+  M +  +  L + R+ A    +I L ++ +LA++       +
Sbjct: 129 FTAQLGAMRISEEIDALEAMAIPSISFLTATRVIAGFVAVIPLYIVGLLASYVMTRFVNT 188

Query: 278 AIIGASIVIWKYYDIPFAVFFS 299
            ++G S   + +Y   F +F S
Sbjct: 189 TLLGQSTGTYDHY---FNLFLS 207


>gi|296169577|ref|ZP_06851197.1| integral membrane protein YrbE4a [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295895843|gb|EFG75538.1| integral membrane protein YrbE4a [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 249

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 9/185 (4%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L+SF    ++ + GA  LS  GA   ++         ++G L+T +++AG   +A
Sbjct: 48  IPFTVLVSFTLNILLRELGAADLSGAGAAFGAVT--------QVGPLVTVLIVAGAGSTA 99

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + A++GS  I EEIDA+  +G++ V+ L++PR+ A  +   LL  L     I+G  +   
Sbjct: 100 MCADLGSRTIREEIDAMEVLGINPVQRLVTPRMLAAGLVALLLNSLVVIIGIVGGYVFSV 159

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-GVHSNSLGKKV 346
              D+    F +       +  +    +KA       G+VA   G  + G  + ++G  V
Sbjct: 160 FVQDVNPGAFAAGITLLTGVPEVIISCVKAALFGLIAGLVACYRGLTITGGGAKAVGNAV 219

Query: 347 TTCVV 351
              VV
Sbjct: 220 NETVV 224


>gi|254495378|ref|ZP_05108302.1| ABC transporter, permease protein [Polaribacter sp. MED152]
 gi|85819732|gb|EAQ40889.1| ABC transporter, permease protein [Polaribacter sp. MED152]
          Length = 234

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 20/227 (8%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           K + F  +L++++  +G+  + +++ ISF  G VIA Q A  L    +      L+    
Sbjct: 11  KARVFYDALLKEIEELGLKSLGIILFISFFIGGVIALQTALNLD---SAFIPRSLIGFAA 67

Query: 208 LR----EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263
            R    E      ++++AG+ GS I + IG+M++ E+IDA+  MG++ +  L+ P++ A 
Sbjct: 68  KRSIILEFAPTFCSIILAGKVGSYITSSIGTMRVTEQIDALEVMGINSLNHLVLPKVIAT 127

Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT------GLIKA 317
           +   P L  L     + G       +     +  FS  +    L   F        LIK 
Sbjct: 128 VFFYPFLITLGMVLGMFGG------WLAGVLSGLFSGVNYIEGLQTDFQPFLIVYALIKT 181

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
              A  I  V    G+ V   S ++GK  T  VV + +I+I+I + F
Sbjct: 182 LVFAFLIATVPSYHGYYVKGGSIAVGKASTQSVVWT-TILIVIANYF 227


>gi|120437216|ref|YP_862902.1| ABC-type transporter permease protein [Gramella forsetii KT0803]
 gi|117579366|emb|CAL67835.1| ABC-type transporter permease protein [Gramella forsetii KT0803]
          Length = 245

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 21/203 (10%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ----LREIGVLLTAVMIAGRSG 225
           +V  +SF  GAV+A Q A  L+     +    L++       + E      ++++AG+ G
Sbjct: 45  IVAFLSFFIGAVVAIQTALNLNN---PLIPKSLVAFAARQSVILEFAPTFISIIMAGKVG 101

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           S I + IGSM++ E+IDA+  MG++    LI P+I A+ ++ P L  +A F  I GA   
Sbjct: 102 SFITSSIGSMRVTEQIDALEVMGINSKNYLILPKIIAM-LTYPFLIAIAMFLGIAGA--- 157

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTG------LIKAPFMACAIGIVAMKEGFAVGVHS 339
              Y+   F  F +       L + F G       IK    A  +  V    G+ +   +
Sbjct: 158 ---YFAAVFGGFVTSDQFLTGLQDDFNGFHLTYAFIKTFLFAFILATVPSYHGYYMKGGA 214

Query: 340 NSLGKKVTTCVVQSISIVIIIDS 362
             +G+  TT  V + S+V+II +
Sbjct: 215 LEVGEASTTSFVWT-SVVLIITN 236


>gi|118472034|ref|YP_884758.1| hypothetical protein MSMEG_0345 [Mycobacterium smegmatis str. MC2
           155]
 gi|118173321|gb|ABK74217.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
           155]
          Length = 272

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 75/139 (53%), Gaps = 7/139 (5%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V +V  ++  TGA++A QG  Q +  G E  +    +   +R I    TAV ++   G+ 
Sbjct: 61  VAIVGFLTMTTGALVAVQGYNQFASVGVEALTGFASAFFNVRLIAPGTTAVALSATIGAG 120

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPLL---TILANFSAIIGAS 283
             A++G+M+INEEIDA+  +G+  V  L S R+ A +I+ +PL     I++  S+ +G +
Sbjct: 121 ATAQLGAMRINEEIDALEVIGIRSVSYLASTRVAAGVIVVIPLYCVAVIMSFISSRLGTT 180

Query: 284 IVIWK---YYDIPFAVFFS 299
           ++  +    YD  F  F +
Sbjct: 181 VIYGQGSGVYDHYFNTFLN 199


>gi|118469614|ref|YP_884548.1| hypothetical protein MSMEG_0132 [Mycobacterium smegmatis str. MC2
           155]
 gi|118170901|gb|ABK71797.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
           155]
          Length = 266

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 110/235 (46%), Gaps = 40/235 (17%)

Query: 147 YKFKGFLLS---LIRQMYYVGVS-GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDL 202
           +++K F+L    LIR  +   ++  +P+ +LI F    ++A+ GA  +S  GA + ++  
Sbjct: 42  FQWKEFVLQSWFLIRVAFLPTLAVSIPLTVLIIFTLNILLAEFGAADVSGAGAALGAVT- 100

Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
                  ++G L+T +++AG   +AI A++G+  + EEIDA+  +G+D +  L+ PR+ A
Sbjct: 101 -------QLGPLVTVLVVAGAGSTAICADLGARTVREEIDALEVLGIDPIERLVVPRVVA 153

Query: 263 LIISLPLLTILANFSAII--GASIVIWKYYDIPFAVFFSR-----FHSTATL----ANIF 311
                      + F A +  GA I I       F V+        + ST TL      + 
Sbjct: 154 -----------STFVAFMLNGAVITIGLVGGFFFGVYIQNVSAGAYVSTLTLLTGFPEVL 202

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
             ++KA       G+V    G  V   S  +G  V        ++V+ + +LFA+
Sbjct: 203 ISVVKATLFGMIAGLVGCYRGLTVAGGSKGVGTAVNE------TLVLCVVALFAV 251


>gi|226364103|ref|YP_002781885.1| YrbE family protein [Rhodococcus opacus B4]
 gi|226242592|dbj|BAH52940.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 264

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 52/79 (65%), Gaps = 4/79 (5%)

Query: 188 FQLSQFGAEIFSIDL----MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           +Q++   AEI ++DL      +  +REIG ++T +++AG   +AI A++GS  I EEIDA
Sbjct: 78  YQINILLAEIGAVDLSGAGAGVAIIREIGPVVTVLVVAGAGSTAICADLGSRTIREEIDA 137

Query: 244 IRTMGLDFVRILISPRIWA 262
           ++ +G+D ++ L  PR+ A
Sbjct: 138 MKVLGIDPIQRLCVPRVLA 156


>gi|183982884|ref|YP_001851175.1| integral membrane protein YrbE3A [Mycobacterium marinum M]
 gi|183176210|gb|ACC41320.1| conserved hypothetical integral membrane protein YrbE3A
           [Mycobacterium marinum M]
          Length = 282

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 86/179 (48%), Gaps = 8/179 (4%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  ++  F+   ++   GA   S  G  IF++D        +   ++T +++AG   +A
Sbjct: 84  IPWAVISGFLFNVLLTDIGAADFSGTGCAIFTVD--------QSAPIVTVLVVAGAGATA 135

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + A++G+  I EE+DA+R MG++ ++ L+ PR+ A       L+ L   + +IGA +   
Sbjct: 136 MCADLGARTIREELDALRVMGINPIQALVVPRVLAATTVSLALSSLVIATGLIGAFLCSV 195

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
               +    + +   +     ++   +IKA       G++A  +G +VG     +G+ V
Sbjct: 196 FLMHVSAGAWVTGLTTLTHTVDVVISMIKATLFGLMAGLIACYKGISVGGGPAGVGRAV 254


>gi|300782534|ref|YP_003762825.1| ABC transporter permease [Amycolatopsis mediterranei U32]
 gi|41581798|gb|AAS07742.1| putative ABC-transporter permease [Amycolatopsis mediterranei S699]
 gi|299792048|gb|ADJ42423.1| ABC transport system permease protein [Amycolatopsis mediterranei
           U32]
          Length = 278

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 67/119 (56%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V++ ++  TG ++  QG   L+  G   F+  L +    REI  L+  + ++   G+ 
Sbjct: 67  VGVMVGLTLFTGVLVGLQGYSALNSIGTSAFTGFLTAFFNTREIAPLVAGLALSATVGAG 126

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
             A++G+M+I+EEIDA+  MG+  +  L++ RI A  +++  L I+   S+ + + +V+
Sbjct: 127 FTAQLGAMRISEEIDALEVMGVPSLPYLVTTRIIAGFVAVIPLYIIGLLSSYLASRLVV 185


>gi|119714948|ref|YP_921913.1| hypothetical protein Noca_0701 [Nocardioides sp. JS614]
 gi|119535609|gb|ABL80226.1| protein of unknown function DUF140 [Nocardioides sp. JS614]
          Length = 261

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 107/216 (49%)

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           L   I+Q +++    +    L++   GAVIA Q    + QFGA+ F+     +  +++  
Sbjct: 37  LREFIQQAWFIASVTIIPTALVAIPFGAVIALQVGGLIKQFGAQSFTGSASVLAVVQQAA 96

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            + TA++IAG  GSAI A++G+ KI EE+DA+  +G+D ++ L+ PR+ A ++    L  
Sbjct: 97  PIGTALLIAGAGGSAIAADLGARKIREELDAMMVLGIDPIQRLVVPRVLAAMLVAVFLNG 156

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           L +   + G  +      D     + + F + + L +++ G+ KA        +VA  +G
Sbjct: 157 LVSVVGVAGGYVFNVILQDGTPGAYLASFTALSQLPDLWQGMAKALVFGLIAAVVACYKG 216

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
                    +G  V   VV +  ++ I++ + +  Y
Sbjct: 217 MNAAGGPKGVGDAVNESVVVTFILLFIVNFVMSAIY 252


>gi|326333295|ref|ZP_08199542.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
 gi|325948939|gb|EGD41032.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
          Length = 267

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 3/199 (1%)

Query: 171 VILISFVTGAV---IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V++I F+T A    +  Q        G    S    +    RE+  ++  + +    G+ 
Sbjct: 57  VLVIGFLTAASGIEVGLQAYTSFDNIGVSALSGFFSAYFNTREVAPIIAGIALTATVGAG 116

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
             A+IG+M+++EEIDA+  M +  V  L++ RI A +I++  L  +A     +   +V+ 
Sbjct: 117 FTAQIGAMRVSEEIDALEVMAVPPVPYLVTTRIMAGLIAVIPLYAIAVMMCWLATRLVVT 176

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
             YD     +   F +     ++F  ++K   MA  +  V    GF        +G+ V 
Sbjct: 177 VGYDEAPGTYQHYFDTFLIPGDLFLSMLKVTIMALVVVSVCCYHGFKAAGGPAGVGRAVG 236

Query: 348 TCVVQSISIVIIIDSLFAI 366
             V  ++  ++ +D +F I
Sbjct: 237 RAVRSALIAIMFVDLIFGI 255


>gi|226365582|ref|YP_002783365.1| YrbE family protein [Rhodococcus opacus B4]
 gi|226244072|dbj|BAH54420.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 269

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 58/98 (59%), Gaps = 8/98 (8%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P+ +LI+   G++          Q GAE ++  ++  + + +   L+ A+M+AG  GSA
Sbjct: 67  IPIGVLIAVTIGSLA--------GQLGAEGYTGAVVGFVIVGQASALVCALMLAGVGGSA 118

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
           I A++GS  I EE++A+  +GLD +  L+ PR+ A +I
Sbjct: 119 ICADLGSRTIREEVEAMEVLGLDVIERLVVPRVLAAVI 156


>gi|296141835|ref|YP_003649078.1| hypothetical protein Tpau_4170 [Tsukamurella paurometabola DSM
           20162]
 gi|296029969|gb|ADG80739.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM
           20162]
          Length = 285

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 66/131 (50%)

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           ++G+  I +E+DA+RTMG+D V  L++PR+ A ++  PLL +      I+ A  V     
Sbjct: 139 DLGARTIRDEVDALRTMGIDPVHRLVAPRLIAAVVVAPLLNLFIVVVGILAAFYVAVLGQ 198

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
           D+    ++  F + AT+ ++   ++KA      I IV  + G      +  +   V   V
Sbjct: 199 DVTPGSYWLSFGAYATVRDLGFSMVKAALFGAIIAIVGCQHGLEAKGGARGVADAVNATV 258

Query: 351 VQSISIVIIID 361
           V S   +I+++
Sbjct: 259 VVSTVAIIVLN 269


>gi|118470891|ref|YP_884757.1| hypothetical protein MSMEG_0344 [Mycobacterium smegmatis str. MC2
           155]
 gi|118172178|gb|ABK73074.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
           155]
          Length = 256

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 49/73 (67%)

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L +FGA  FS    +I  + +IG ++T +++AG   +A+ A++G+  I EE+DA+R MG+
Sbjct: 72  LIEFGAADFSGTGAAIGTVSQIGPIVTVLVVAGAGSTAMCADLGARTIREELDAMRVMGI 131

Query: 250 DFVRILISPRIWA 262
           D ++ L+ PR+ A
Sbjct: 132 DPIQALVVPRVLA 144


>gi|302525040|ref|ZP_07277382.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4]
 gi|302433935|gb|EFL05751.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4]
          Length = 272

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 10/189 (5%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V++ ++  TG V+  QG   L+Q G   F+  + +    REI  L+  + ++   G    
Sbjct: 63  VMVGMTVATGTVVGLQGYSALNQVGTSAFAGFISAYFNTREIAPLVAGLALSATVGCGFT 122

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTILANFSAIIGASIVIWK 288
           A++G+M+I+EEIDA+  MG+  V  L++ R+ A  I+ +PL  +    S +    + +W 
Sbjct: 123 AQLGAMRISEEIDALEVMGIPSVPYLVTTRVIAGFIAVIPLYAVGLLSSYLASRQVTVWG 182

Query: 289 Y------YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
           +      YD  F +F        +   +    +      C  G  A      VGV   ++
Sbjct: 183 FGQSAGTYDHYFLLFLPPGDVLWSFGKVLIFSVVVVLAHCYYGFRASGGPAGVGV---AV 239

Query: 343 GKKVTTCVV 351
           G+ V T +V
Sbjct: 240 GRAVRTAIV 248


>gi|108797254|ref|YP_637451.1| hypothetical protein Mmcs_0274 [Mycobacterium sp. MCS]
 gi|119866339|ref|YP_936291.1| hypothetical protein Mkms_0284 [Mycobacterium sp. KMS]
 gi|126432878|ref|YP_001068569.1| hypothetical protein Mjls_0265 [Mycobacterium sp. JLS]
 gi|108767673|gb|ABG06395.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
 gi|119692428|gb|ABL89501.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
 gi|126232678|gb|ABN96078.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 285

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 63/106 (59%), Gaps = 4/106 (3%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V+++ F+T   G  +A QG   L   G E  +  L + + +R    ++  + +A   G+ 
Sbjct: 74  VVIVGFLTLAAGGTLAVQGYSSLGDIGIEALTGFLAAFINVRISAPVVAGIGLAATFGAG 133

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTI 272
           + A++G+M+INEE+DA+ TMG+  +  L+S RI A +I++ PL ++
Sbjct: 134 VTAQLGAMRINEEVDALETMGIRPIEYLVSTRIIAGMIAITPLYSV 179


>gi|145223094|ref|YP_001133772.1| hypothetical protein Mflv_2507 [Mycobacterium gilvum PYR-GCK]
 gi|145215580|gb|ABP44984.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
          Length = 285

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 63/106 (59%), Gaps = 4/106 (3%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V+++ F+T   G  +A QG   L   G E  +  L + + +R    ++  + +A   G+ 
Sbjct: 74  VVIVGFLTLAAGGTLAIQGYSSLGDIGIEALTGFLAAFINVRIAAPVVAGIGLAATFGAG 133

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTI 272
           + A++G+M+INEEIDA+ +MG+  V  L+S RI A ++++ PL +I
Sbjct: 134 VTAQLGAMRINEEIDALESMGIRPVEYLVSTRIVAGMVAITPLYSI 179


>gi|120405105|ref|YP_954934.1| hypothetical protein Mvan_4151 [Mycobacterium vanbaalenii PYR-1]
 gi|119957923|gb|ABM14928.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 285

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 63/106 (59%), Gaps = 4/106 (3%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V+++ F+T   G  +A QG   L   G E  +  L + + +R    ++  + +A   G+ 
Sbjct: 74  VVIVGFLTLAAGGTLAIQGYSSLGNIGIEALTGFLAAFINVRIAAPVVAGIGLAATFGAG 133

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTI 272
           + A++G+M+INEEIDA+ +MG+  V  L+S RI A ++++ PL +I
Sbjct: 134 VTAQLGAMRINEEIDALESMGIRPVEYLVSTRIVAGMVAIAPLYSI 179


>gi|296166535|ref|ZP_06848966.1| membrane protein YrbE4A [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295898147|gb|EFG77722.1| membrane protein YrbE4A [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 254

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 26/203 (12%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L++F    ++ + GA  LS  G    +I         ++G ++T +++AG   +A
Sbjct: 56  IPFTVLVAFTLNILLREIGAADLSGAGTAFGTIT--------QLGPVVTVLVVAGAGATA 107

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+  I EEIDA+R +G+D V  L+ PR+ A  +   LL  L     + G  +   
Sbjct: 108 ICADLGARTIREEIDAMRVLGIDPVHRLVVPRVLASTVVALLLNGLVCAIGLSGGYV--- 164

Query: 288 KYYDIPFAVFFSRFHSTATL--ANIFTGL-------IKAPFMACAIGIVAMKEGFAVGVH 338
                 F+VF    +  A +    + TGL       +KA       G+V    G  V   
Sbjct: 165 ------FSVFLQGVNPGAFINGLTVLTGLRELVLAEVKALLFGVMAGLVGCYRGLTVKGG 218

Query: 339 SNSLGKKVTTCVVQSISIVIIID 361
              +G  V   VV +   + +I+
Sbjct: 219 PKGVGNAVNETVVYAFICLFVIN 241


>gi|118469369|ref|YP_889051.1| ABC transporter transmembrane protein [Mycobacterium smegmatis str.
           MC2 155]
 gi|118170656|gb|ABK71552.1| ABC-transporter integral membrane protein [Mycobacterium smegmatis
           str. MC2 155]
          Length = 282

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 61/106 (57%), Gaps = 1/106 (0%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V +V  ++  TG V+A QG   L   G E  +  L + + +R    ++  + +A   G+ 
Sbjct: 71  VVIVGFLTLATGGVLAIQGYSSLGNIGIEALTGFLSAFINVRIAAPVVAGIGLAATFGAG 130

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTI 272
           + A++G+M+INEEIDA+ +M +  V  L+S RI A +I++ PL  I
Sbjct: 131 VTAQLGAMRINEEIDALESMAIRPVEYLVSTRIVAGMIAITPLYAI 176


>gi|254820119|ref|ZP_05225120.1| hypothetical protein MintA_09341 [Mycobacterium intracellulare ATCC
           13950]
          Length = 256

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 22/183 (12%)

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L +FGA  FS    ++  + +IG L+T +++AG   +A+ A++G+  I EE+DA+R +G+
Sbjct: 73  LIEFGAGDFSGSGAALATVTQIGPLVTVLVVAGAGATAMCADLGARTIREELDALRVLGI 132

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAII--GASIVIWKYYDIPFAVFFSRFH--STA 305
           + +  L+ PR+ A           A F +++  G  IV        F+VF       S A
Sbjct: 133 NPIGSLVVPRVLA-----------ATFVSLLLSGVVIVTGLVGGFEFSVFVQHVTPGSFA 181

Query: 306 TLANIFTG-------LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
               + TG       L+KA        ++A  +G +VG  + ++G  V   VV S   + 
Sbjct: 182 AGLTLLTGARELVIALVKAGLFGLTASLIACYKGISVGRGAAAVGNAVNETVVFSFMSLF 241

Query: 359 IID 361
            ID
Sbjct: 242 FID 244


>gi|120405106|ref|YP_954935.1| hypothetical protein Mvan_4152 [Mycobacterium vanbaalenii PYR-1]
 gi|119957924|gb|ABM14929.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 269

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 27/204 (13%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L+SF    ++ + GA  LS  GA   ++         ++G L+T +++AG   +A
Sbjct: 70  IPFTVLVSFTLNILLRELGAADLSGAGAAFGAVT--------QVGPLVTVLIVAGAGATA 121

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + A++GS  I EEIDA+  +G++ V+ L++PR+ A  +   LL  L     I+G      
Sbjct: 122 MCADLGSRTIREEIDAMEVLGINPVQRLVTPRMLAAGLVALLLNSLVVIIGILGG----- 176

Query: 288 KYYDIPFAVFFSRFHSTATLANI--FTGL-------IKAPFMACAIGIVAMKEGFAV-GV 337
            Y+   F+VF    +  A  A I   TG+       +KA       G+VA   G  + G 
Sbjct: 177 -YF---FSVFVQDVNPGAFAAGITLLTGVPEVIISCVKAALFGLIAGLVACYRGLTITGG 232

Query: 338 HSNSLGKKVTTCVVQSISIVIIID 361
            + ++G  V   VV +   + +I+
Sbjct: 233 GAKAVGNAVNETVVYAFMALFVIN 256


>gi|315443551|ref|YP_004076430.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|315261854|gb|ADT98595.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 285

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 63/106 (59%), Gaps = 4/106 (3%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V+++ F+T   G  +A QG   L   G E  +  L + + +R    ++  + +A   G+ 
Sbjct: 74  VVIVGFLTLAAGGTLAIQGYSSLGDIGIEALTGFLAAFINVRIAAPVVAGIGLAATFGAG 133

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTI 272
           + A++G+M+INEEIDA+ +MG+  V  L+S RI A ++++ PL +I
Sbjct: 134 VTAQLGAMRINEEIDALESMGIRPVEYLVSTRIVAGMVAITPLYSI 179


>gi|296179481|gb|ADG96486.1| SupB [Gordonia cholesterolivorans]
          Length = 287

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 90/194 (46%), Gaps = 3/194 (1%)

Query: 171 VILISFVTGAV---IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V++I F+T A    + QQG+  L + G E  S  + +    RE   ++  V +    GS 
Sbjct: 75  VVIIGFLTAAAGYEVGQQGSSSLGRVGVEAMSGFISAFFNTREAIPVIAGVALTATVGSG 134

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
             A++G+M+++EEIDA+  M +  +  L+S RI A ++++  L  +A F+       V  
Sbjct: 135 FTAQLGAMRVSEEIDALEVMSVQSLPYLVSTRIAAGLVAIIPLYAIALFTGYAATKFVSV 194

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
              D     +   F      +++   L+K   MA A+  V    G+        +G  V 
Sbjct: 195 FLSDQSPGTYDHYFQLFLQPSDVAISLLKVIVMAVAVMAVHCYYGYNASGGPAGVGVAVG 254

Query: 348 TCVVQSISIVIIID 361
             V  S+ I++++D
Sbjct: 255 HAVRTSLIIIMVVD 268


>gi|108798493|ref|YP_638690.1| hypothetical protein Mmcs_1523 [Mycobacterium sp. MCS]
 gi|108768912|gb|ABG07634.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
          Length = 272

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 102/200 (51%), Gaps = 20/200 (10%)

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           ++  TGA++A QG  Q +  G E  +    +   +R IG ++  + +A   G+   A++G
Sbjct: 67  LTLSTGALVAVQGYNQFADVGVEALTGFASAYFNVRLIGPVIAGIGLAATIGAGATAQLG 126

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL--LTILANFSAIIGASIVIWKYY 290
           +M+INEEIDA+  MG+  V  L S R+ A +I+ +PL  + +L+ F A    +I I+   
Sbjct: 127 AMRINEEIDALEVMGVRSVAYLASSRVLAGVIVVIPLYCVAVLSAFWAARFGTIAIYGQS 186

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM---------KEGFAVGVHSNS 341
              +  +F+ F ++       T +I + F A A+ IV M           G   GV   +
Sbjct: 187 SGVYDHYFTTFLNS-------TDIIWSFFQAIAMAIVIMLVHTYYGFTATGGPAGV-GEA 238

Query: 342 LGKKVTTCVVQSISIVIIID 361
           +G+ V T ++ ++ +V+ + 
Sbjct: 239 VGRAVRTSLIAAVLVVLFLS 258


>gi|111018969|ref|YP_701941.1| hypothetical protein RHA1_ro01972 [Rhodococcus jostii RHA1]
 gi|110818499|gb|ABG93783.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
          Length = 274

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 66/116 (56%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V+ ++S  TG V+  QG   L Q G+ + +  L + +  REI  ++ A+ ++   G    
Sbjct: 65  VIAMMSGFTGVVVGLQGFAALEQLGSSVLTGFLSAYVNTREIAPIVAALALSATVGCGFT 124

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           A++G+M+I+EEIDA+  M +  V  L++ R+ A  +++  L I+   +A + + I+
Sbjct: 125 AQLGAMRISEEIDALEVMAVPSVPFLVTTRMIAGFVAVIPLYIVGLLAAYLASRII 180


>gi|298208113|ref|YP_003716292.1| hypothetical protein CA2559_07665 [Croceibacter atlanticus
           HTCC2559]
 gi|83850754|gb|EAP88622.1| hypothetical protein CA2559_07665 [Croceibacter atlanticus
           HTCC2559]
          Length = 233

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 69/122 (56%), Gaps = 8/122 (6%)

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ----LREIGVLLTAVMI 220
           +S + +V  ISF  GAV++ Q A  L+     +   +L+        + E      +V++
Sbjct: 28  MSSLGIVTFISFFIGAVVSIQTALNLNN---PLIPKELIGFAARQSIILEFAPTFISVIM 84

Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280
           AG+ GS I + IG+M++ E+IDA+  MG++ +  L+ P+I A++I  P L  +A F  I+
Sbjct: 85  AGKVGSYITSSIGTMRVTEQIDALEVMGINSLNYLVLPKIVAMMI-YPFLIGIAMFIGIL 143

Query: 281 GA 282
           GA
Sbjct: 144 GA 145


>gi|111021669|ref|YP_704641.1| hypothetical protein RHA1_ro04697 [Rhodococcus jostii RHA1]
 gi|110821199|gb|ABG96483.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
          Length = 283

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 87/169 (51%), Gaps = 6/169 (3%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V +V  ++  TG  IA QG   L   G E  +    + + +R    ++  + +A   G+ 
Sbjct: 72  VVIVGFLTLFTGGTIAVQGYSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGLAATIGAG 131

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPL--LTILANFSAIIGASI 284
             A++G+M+++EEIDA+ TM +  +  L+S R+ A +I+ +PL  L ++A+F A   A++
Sbjct: 132 STAQLGAMRVSEEIDALETMAIPSIPYLVSTRVMAGMIAIIPLYALAVIASFMASRFATV 191

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
           V+   YD    V+   F +     +I     +A  MA AI ++    GF
Sbjct: 192 VL---YDQSSGVYDHYFSTFLIPTDILWSFAQAIVMAIAIMLIHTYYGF 237


>gi|262201121|ref|YP_003272329.1| hypothetical protein Gbro_1128 [Gordonia bronchialis DSM 43247]
 gi|262084468|gb|ACY20436.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247]
          Length = 268

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 108/207 (52%), Gaps = 10/207 (4%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I+Q +++    +    LI+   GA+++ Q    + Q GAE ++     ++ +++   L+T
Sbjct: 48  IQQAWFIASVTILPTALIAIPFGAIVSLQTGSLIKQLGAESYTGAASVLVVIQQGSPLVT 107

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           +++IAG +GSA+ A++GS  I EEIDA+  +G++ ++ L+ PR+ A+++   LL  L   
Sbjct: 108 SLLIAGAAGSAVAADLGSRTIREEIDAMEVLGINPIQRLVVPRVLAMVLVAMLLNGLVAV 167

Query: 277 SAIIGA---SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
             I G    ++V+      P A + + F + A L +++   +KA       G+VA  +G 
Sbjct: 168 IGIGGGYFFNVVVQG--GTPGA-YLASFGALAQLPDLYVSTLKAAIFGVLAGVVAAYKGL 224

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIII 360
               H     K V   V QS+ I  ++
Sbjct: 225 ----HPKGGPKGVGDAVNQSVVITFLL 247


>gi|119867594|ref|YP_937546.1| hypothetical protein Mkms_1546 [Mycobacterium sp. KMS]
 gi|119693683|gb|ABL90756.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
          Length = 284

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 102/200 (51%), Gaps = 20/200 (10%)

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           ++  TGA++A QG  Q +  G E  +    +   +R IG ++  + +A   G+   A++G
Sbjct: 79  LTLSTGALVAVQGYNQFADVGVEALTGFASAYFNVRLIGPVIAGIGLAATIGAGATAQLG 138

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL--LTILANFSAIIGASIVIWKYY 290
           +M+INEEIDA+  MG+  V  L S R+ A +I+ +PL  + +L+ F A    +I I+   
Sbjct: 139 AMRINEEIDALEVMGVRSVAYLASSRVLAGVIVVIPLYCVAVLSAFWAARFGTIAIYGQS 198

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM---------KEGFAVGVHSNS 341
              +  +F+ F ++       T +I + F A A+ IV M           G   GV   +
Sbjct: 199 SGVYDHYFTTFLNS-------TDIIWSFFQAIAMAIVIMLVHTYYGFTATGGPAGV-GEA 250

Query: 342 LGKKVTTCVVQSISIVIIID 361
           +G+ V T ++ ++ +V+ + 
Sbjct: 251 VGRAVRTSLIAAVLVVLFLS 270


>gi|169631107|ref|YP_001704756.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169243074|emb|CAM64102.1| Putative YrbE family protein [Mycobacterium abscessus]
          Length = 320

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 95/179 (53%), Gaps = 1/179 (0%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           ++I+  + + V+ VP  IL+S   G ++A Q    +SQ GA   S     +  +++   +
Sbjct: 99  TVIQSWFILTVTVVPA-ILVSIPFGVIVAVQAGSIISQVGASSISGAAGGLGVIQQGAPI 157

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           + A+++ G +GSA+  ++G+  I EE+DA+R MG++ V+ L++PR+ A++   PLL I  
Sbjct: 158 VAALLLGGAAGSAVATDLGARSIREEVDAMRVMGVNPVQRLVTPRLAAILFVSPLLCIFI 217

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
            F  I    +V   +       + S F + A ++++   ++K       + +VA + G 
Sbjct: 218 IFVGIFAGYLVNVGFQGGTPGSYLSSFAAFANVSDVTVAVLKTWLFGVVVILVACQRGL 276


>gi|254822745|ref|ZP_05227746.1| hypothetical protein MintA_22639 [Mycobacterium intracellulare ATCC
           13950]
          Length = 237

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 26/203 (12%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L++F    ++ + GA  LS  G    +I         ++G ++T +++AG   +A
Sbjct: 39  IPFTVLVAFTLNILLREIGAADLSGAGTAFGTIT--------QLGPVVTVLVVAGAGATA 90

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+  I EEIDA+R +G+D ++ L+ PR+ A  +   LL  L     + G  +   
Sbjct: 91  ICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLASTVVALLLNGLVCAIGLSGGYV--- 147

Query: 288 KYYDIPFAVFFSRFHSTATL--ANIFTGL-------IKAPFMACAIGIVAMKEGFAVGVH 338
                 F+VF    +  A +    + TGL       +KA       G+V    G  V   
Sbjct: 148 ------FSVFLQGVNPGAFINGLTVLTGLRELVLAEVKALLFGVMAGMVGCYRGLTVKGG 201

Query: 339 SNSLGKKVTTCVVQSISIVIIID 361
              +G  V   VV +   + +I+
Sbjct: 202 PKGVGNAVNETVVYAFICLFVIN 224


>gi|289645180|ref|ZP_06477195.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
 gi|289505005|gb|EFD26088.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
          Length = 283

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 15/207 (7%)

Query: 173 LISFVTGAVIAQ---QGAFQLSQFGAE----IFSIDLMSILQLREIGVLLTAVMIAGRSG 225
           +I F+ G + A+   +G + LSQ GA     +F+      +     G +L+A +  G   
Sbjct: 74  IIWFMMGMLAAEASLEGHYLLSQLGAGSYTGVFTSTADYTVAPEMWGWILSAKVACG--- 130

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
             +VAE+GSM+I+EEIDA+  MGLD    LIS R+ A+II  P + ++     + G   V
Sbjct: 131 --LVAELGSMRISEEIDALEVMGLDPHSYLISTRLLAVIIITPFMFMIGT-GIMYGVQYV 187

Query: 286 --IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
             +  ++ +    + S F +  T  ++   L     M   I  V    G+        +G
Sbjct: 188 LNVHVFHSVSAGGYLSVFWAFQTQQDVLLSLAMGAIMGMMIVTVGCYYGYTASGGPVGVG 247

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370
           K     +V ++ IV ++ ++F   +F 
Sbjct: 248 KNTAKSMVINLVIVSVVGAVFQQMFFG 274


>gi|302523959|ref|ZP_07276301.1| ABC transporter integral membrane protein [Streptomyces sp. AA4]
 gi|302432854|gb|EFL04670.1| ABC transporter integral membrane protein [Streptomyces sp. AA4]
          Length = 278

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 67/119 (56%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V++ ++  TG ++  QG   L+  G   F+  L +    REI  L+  + ++   G+ 
Sbjct: 67  VGVMVGLTLFTGVLVGLQGYSALNSIGTSAFTGFLTAFFNTREIAPLVAGLALSATVGAG 126

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
             A++G+M+I+EEIDA+  MG+  +  L++ RI A  +++  L ++   S+ + + +V+
Sbjct: 127 FTAQLGAMRISEEIDALEVMGVPSLPYLVTTRIIAGFVAVIPLYVIGLLSSYLASRLVV 185


>gi|145222146|ref|YP_001132824.1| hypothetical protein Mflv_1554 [Mycobacterium gilvum PYR-GCK]
 gi|145214632|gb|ABP44036.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
          Length = 237

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 8/194 (4%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L++F    ++ + GA  LS  G    +I         ++G ++T +++AG   +A
Sbjct: 39  IPFTVLVAFTLNILLREIGAADLSGAGTAFGTIT--------QLGPVVTVLVVAGAGATA 90

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+  I EEIDA+R +G+D ++ L+ PR+ A      LL  L     + G  +   
Sbjct: 91  ICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLASTFVALLLNGLVCLIGLSGGYVFSV 150

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
               +    F +       L  +    IKA       G+V    G  V      +G  V 
Sbjct: 151 FLQGVNPGSFINGLTVLTGLPELILAEIKALLFGVVAGLVGCYRGLTVKGGPKGVGNAVN 210

Query: 348 TCVVQSISIVIIID 361
             VV +   + +I+
Sbjct: 211 ETVVYAFICLFVIN 224


>gi|118619254|ref|YP_907586.1| membrane protein YrbE4A [Mycobacterium ulcerans Agy99]
 gi|118571364|gb|ABL06115.1| conserved membrane protein YrbE4A [Mycobacterium ulcerans Agy99]
          Length = 279

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 26/203 (12%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L++F    ++ + GA  LS  G    +I         ++G ++T +++AG   +A
Sbjct: 81  IPFTVLVAFTLNILLREIGAADLSGAGTAFGTIT--------QLGPVVTVLVVAGAGATA 132

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+  I EEIDA+R +G+D ++ L+ PR+ A   S  +  +L      IG S    
Sbjct: 133 ICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLA---STVVALLLNGLVCAIGLS---- 185

Query: 288 KYYDIPFAVFFSRFHSTATLAN--IFTGL-------IKAPFMACAIGIVAMKEGFAVGVH 338
                 F+VF    +  A +    + TGL       IKA       G+V    G  V   
Sbjct: 186 --GGYAFSVFLQGVNPGAFINGLTVLTGLRELILAEIKALLFGVMAGLVGCYRGLTVKGG 243

Query: 339 SNSLGKKVTTCVVQSISIVIIID 361
              +G  V   VV +   + +I+
Sbjct: 244 PKGVGNAVNETVVYAFICLFVIN 266


>gi|284042176|ref|YP_003392516.1| hypothetical protein Cwoe_0708 [Conexibacter woesei DSM 14684]
 gi|283946397|gb|ADB49141.1| protein of unknown function DUF140 [Conexibacter woesei DSM 14684]
          Length = 272

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 102/197 (51%), Gaps = 1/197 (0%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P+++ ++ ++ +V   Q A  L  FGA      L  +  +RE   ++ A+++AG +G+A
Sbjct: 62  LPLILTMACISYSVPGLQAANFLMLFGALDRMGGLFVLAVIREFAPIVCAIVVAGAAGTA 121

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+ KI EE+DA++ +G+D V+ L+ PR  ALI    L  + A    I G  +   
Sbjct: 122 ITADLGARKIREELDALQVLGVDPVKNLVVPRFLALIAITALFDVFAIVFGITGG-LAAT 180

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
              D     FF+ F ++++  +++  L+K         IV   +G  V   +  +G+ V 
Sbjct: 181 LLNDARIEPFFATFWTSSSTTDLWGSLLKCTIFGGVTAIVCCYKGMTVSGGAAGVGRAVN 240

Query: 348 TCVVQSISIVIIIDSLF 364
             +V +   + +++ +F
Sbjct: 241 QAIVIAFLAIGVVNYVF 257


>gi|226364206|ref|YP_002781988.1| YrbE family protein [Rhodococcus opacus B4]
 gi|226242695|dbj|BAH53043.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 283

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 87/169 (51%), Gaps = 6/169 (3%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V +V  ++  TG  IA QG   L   G E  +    + + +R    ++  + +A   G+ 
Sbjct: 72  VVIVGFLTLFTGGTIAVQGYSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGLAATIGAG 131

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPL--LTILANFSAIIGASI 284
             A++G+M+++EEIDA+ TM +  +  L+S R+ A +I+ +PL  L ++A+F A   A++
Sbjct: 132 STAQLGAMRVSEEIDALETMAIPSIPYLVSTRVMAGMIAIIPLYALAVIASFMASRFATV 191

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
           V+   YD    V+   F +     +I     +A  MA AI ++    GF
Sbjct: 192 VL---YDQSSGVYDHYFSTFLIPTDILWSFAQAIVMAIAIMLIHTYYGF 237


>gi|15843113|ref|NP_338150.1| hypothetical protein MT3605 [Mycobacterium tuberculosis CDC1551]
 gi|13883459|gb|AAK47964.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
          Length = 237

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 26/203 (12%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L++F    ++ + GA  LS  G    +I         ++G ++T +++AG   +A
Sbjct: 39  IPFTVLVAFTLNILLREIGAADLSGAGTAFGTIT--------QLGPVVTVLVVAGAGATA 90

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+  I EEIDA+R +G+D ++ L+ PR+ A      L+ +L N     G    I 
Sbjct: 91  ICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLAST----LVALLLN-----GLVCAIG 141

Query: 288 KYYDIPFAVFFSRFHSTATL--ANIFTGL-------IKAPFMACAIGIVAMKEGFAVGVH 338
                 F+VF    +  A +    + TGL       IKA       G+V    G  V   
Sbjct: 142 LSGGYAFSVFLQGVNPGAFINGLTVLTGLRELILAEIKALLFGVMAGLVGCYRGLTVKGG 201

Query: 339 SNSLGKKVTTCVVQSISIVIIID 361
              +G  V   VV +   + +I+
Sbjct: 202 PKGVGNAVNETVVYAFICLFVIN 224


>gi|240170056|ref|ZP_04748715.1| membrane protein YrbE4A [Mycobacterium kansasii ATCC 12478]
          Length = 254

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 26/203 (12%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L++F    ++ + GA  LS  G    +I         ++G ++T +++AG   +A
Sbjct: 56  IPFTVLVAFTLNILLREIGAADLSGAGTAFGTIT--------QLGPVVTVLVVAGAGATA 107

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+  I EEIDA+R +G+D ++ L+ PR+ A  +   LL  L     + G  +   
Sbjct: 108 ICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLASTLVALLLNGLVCAIGLSGGYV--- 164

Query: 288 KYYDIPFAVFFSRFHSTATL--ANIFTGL-------IKAPFMACAIGIVAMKEGFAVGVH 338
                 F+VF    +  A +    + TGL       +KA       G+V    G  V   
Sbjct: 165 ------FSVFLQGVNPGAFINGLTVLTGLRELILAEVKALLFGVMAGLVGCYRGLTVKGG 218

Query: 339 SNSLGKKVTTCVVQSISIVIIID 361
              +G  V   VV +   + +I+
Sbjct: 219 PKGVGNAVNETVVYAFICLFVIN 241


>gi|118470037|ref|YP_890128.1| hypothetical protein MSMEG_5902 [Mycobacterium smegmatis str. MC2
           155]
 gi|118171324|gb|ABK72220.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
           155]
          Length = 254

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 26/203 (12%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L++F    ++ + GA  LS  G    +I         ++G ++T +++AG   +A
Sbjct: 56  IPFTVLVAFTLNILLREIGAADLSGAGTAFGTIT--------QLGPVVTVLVVAGAGATA 107

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+  I EEIDA+R +G+D ++ L+ PR+ A      LL  L     + G  +   
Sbjct: 108 ICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGLAGGYV--- 164

Query: 288 KYYDIPFAVFFSRFHSTATL--ANIFTGL-------IKAPFMACAIGIVAMKEGFAVGVH 338
                 F+VF    +  A +    + TGL       IKA       G+V    G  V   
Sbjct: 165 ------FSVFLQGVNPGAFINGLTVLTGLGELVLAEIKALLFGVVAGLVGCYRGLTVKGG 218

Query: 339 SNSLGKKVTTCVVQSISIVIIID 361
              +G  V   VV +   + +I+
Sbjct: 219 PKGVGNAVNETVVYAFICLFVIN 241


>gi|225010488|ref|ZP_03700959.1| protein of unknown function DUF140 [Flavobacteria bacterium
           MS024-3C]
 gi|225005317|gb|EEG43268.1| protein of unknown function DUF140 [Flavobacteria bacterium
           MS024-3C]
          Length = 245

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 74/137 (54%), Gaps = 11/137 (8%)

Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ-- 207
           +G +L  I ++ Y     + +VI +SF  G V+  Q A  L+   + +   +L+      
Sbjct: 28  RGLILKEIDELIY---GSMGIVIFVSFFIGGVVTIQTALNLN---SPLIPKNLIGFAARQ 81

Query: 208 --LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
             + E     T++++AG+ GS I + IGSM++ E+IDA+  MG++ +  L+ P+I AL++
Sbjct: 82  SVILEFAPTFTSIIMAGKVGSFITSSIGSMRVTEQIDALEVMGINSLNYLVFPKIIALLM 141

Query: 266 SLPLLTILANFSAIIGA 282
             P +  +A +  I G 
Sbjct: 142 -YPFVIAIAMYLGIFGG 157


>gi|145221308|ref|YP_001131986.1| hypothetical protein Mflv_0713 [Mycobacterium gilvum PYR-GCK]
 gi|315441804|ref|YP_004074683.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|145213794|gb|ABP43198.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
 gi|315260107|gb|ADT96848.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 265

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/226 (23%), Positives = 105/226 (46%), Gaps = 18/226 (7%)

Query: 145 SSYKFKGFLLS---LIRQMYYVGVS-GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSI 200
           + ++++ F+L    L+R  +   V+  +P+ +L+ F    ++ + GA  +S  GA + ++
Sbjct: 39  TPFQWREFILQSWFLLRVAFLPTVAVSIPLTVLLIFTLNILLTEFGAADISGAGAALGAV 98

Query: 201 DLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRI 260
                    ++G L+T +++AG   +AI A++G+  I EEIDA+  +G+D +  L+ PR+
Sbjct: 99  T--------QLGPLVTVLVVAGAGSTAICADLGARTIREEIDALEVLGIDPIHRLVVPRV 150

Query: 261 WALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320
            A      LL        ++G  I      ++    + S       L  +   L+KA   
Sbjct: 151 IASTFVAMLLNGAVITIGLVGGFIFGVYLQNVSAGAYVSTLTLVTGLPEVLISLVKALTF 210

Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
               G+V    G  V   +  +G  V        ++V+ + +LFA+
Sbjct: 211 GLIAGLVGCYRGLTVAGGAKGVGTAVNE------TLVLCVIALFAV 250


>gi|15610637|ref|NP_218018.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis H37Rv]
 gi|31794677|ref|NP_857170.1| integral membrane protein YrbE4a [Mycobacterium bovis AF2122/97]
 gi|121639420|ref|YP_979644.1| integral membrane protein YrbE4a [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148663365|ref|YP_001284888.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis H37Ra]
 gi|148824708|ref|YP_001289462.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis F11]
 gi|167967132|ref|ZP_02549409.1| conserved membrane protein YrbE4A [Mycobacterium tuberculosis
           H37Ra]
 gi|215405542|ref|ZP_03417723.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           02_1987]
 gi|215413414|ref|ZP_03422098.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           94_M4241A]
 gi|215429007|ref|ZP_03426926.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis T92]
 gi|215432469|ref|ZP_03430388.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           EAS054]
 gi|215447834|ref|ZP_03434586.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis T85]
 gi|218755278|ref|ZP_03534074.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis GM
           1503]
 gi|219559568|ref|ZP_03538644.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis T17]
 gi|224991916|ref|YP_002646605.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253800543|ref|YP_003033544.1| hypothetical protein TBMG_03546 [Mycobacterium tuberculosis KZN
           1435]
 gi|254234087|ref|ZP_04927412.1| hypothetical integral membrane protein yrbE4A [Mycobacterium
           tuberculosis C]
 gi|254366847|ref|ZP_04982888.1| hypothetical integral membrane protein yrbE4A [Mycobacterium
           tuberculosis str. Haarlem]
 gi|254552603|ref|ZP_05143050.1| hypothetical protein Mtube_19505 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260188553|ref|ZP_05766027.1| hypothetical protein MtubCP_21377 [Mycobacterium tuberculosis
           CPHL_A]
 gi|260202680|ref|ZP_05770171.1| hypothetical protein MtubT4_21968 [Mycobacterium tuberculosis T46]
 gi|260206868|ref|ZP_05774359.1| hypothetical protein MtubK8_21506 [Mycobacterium tuberculosis K85]
 gi|289445098|ref|ZP_06434842.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis
           T46]
 gi|289449203|ref|ZP_06438947.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis
           CPHL_A]
 gi|289555767|ref|ZP_06444977.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis KZN
           605]
 gi|289571734|ref|ZP_06451961.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis
           T17]
 gi|289576235|ref|ZP_06456462.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis K85]
 gi|289747337|ref|ZP_06506715.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           02_1987]
 gi|289752222|ref|ZP_06511600.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis
           T92]
 gi|289755631|ref|ZP_06515009.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           EAS054]
 gi|289759660|ref|ZP_06519038.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|289763681|ref|ZP_06523059.1| hypothetical integral membrane protein yrbE4A [Mycobacterium
           tuberculosis GM 1503]
 gi|294995729|ref|ZP_06801420.1| hypothetical protein Mtub2_14793 [Mycobacterium tuberculosis 210]
 gi|297636157|ref|ZP_06953937.1| hypothetical protein MtubK4_18625 [Mycobacterium tuberculosis KZN
           4207]
 gi|297733157|ref|ZP_06962275.1| hypothetical protein MtubKR_18795 [Mycobacterium tuberculosis KZN
           R506]
 gi|298526981|ref|ZP_07014390.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|306777851|ref|ZP_07416188.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu001]
 gi|306782582|ref|ZP_07420919.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu002]
 gi|306786400|ref|ZP_07424722.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu003]
 gi|306790769|ref|ZP_07429091.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu004]
 gi|306795299|ref|ZP_07433601.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu005]
 gi|306799487|ref|ZP_07437789.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu006]
 gi|306805333|ref|ZP_07442001.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu008]
 gi|306809519|ref|ZP_07446187.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu007]
 gi|306969626|ref|ZP_07482287.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu009]
 gi|306973969|ref|ZP_07486630.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu010]
 gi|307081677|ref|ZP_07490847.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu011]
 gi|307086285|ref|ZP_07495398.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu012]
 gi|313660488|ref|ZP_07817368.1| hypothetical protein MtubKV_18790 [Mycobacterium tuberculosis KZN
           V2475]
 gi|2924438|emb|CAA17738.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE4A
           [Mycobacterium tuberculosis H37Rv]
 gi|31620274|emb|CAD95717.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE4A
           [Mycobacterium bovis AF2122/97]
 gi|121495068|emb|CAL73554.1| Conserved hypothetical integral membrane protein yrbE4A
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124599616|gb|EAY58720.1| hypothetical integral membrane protein yrbE4A [Mycobacterium
           tuberculosis C]
 gi|134152356|gb|EBA44401.1| hypothetical integral membrane protein yrbE4A [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148507517|gb|ABQ75326.1| conserved hypothetical integral membrane protein YrbE4a
           [Mycobacterium tuberculosis H37Ra]
 gi|148723235|gb|ABR07860.1| hypothetical integral membrane protein yrbE4A [Mycobacterium
           tuberculosis F11]
 gi|224775031|dbj|BAH27837.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253322046|gb|ACT26649.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis
           KZN 1435]
 gi|289418017|gb|EFD15257.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis
           T46]
 gi|289422161|gb|EFD19362.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis
           CPHL_A]
 gi|289440399|gb|EFD22892.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis KZN
           605]
 gi|289540666|gb|EFD45244.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis K85]
 gi|289545488|gb|EFD49136.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis
           T17]
 gi|289687865|gb|EFD55353.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           02_1987]
 gi|289692809|gb|EFD60238.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis
           T92]
 gi|289696218|gb|EFD63647.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           EAS054]
 gi|289711187|gb|EFD75203.1| hypothetical integral membrane protein yrbE4A [Mycobacterium
           tuberculosis GM 1503]
 gi|289715224|gb|EFD79236.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|298496775|gb|EFI32069.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|308213831|gb|EFO73230.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu001]
 gi|308324772|gb|EFP13623.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu002]
 gi|308329036|gb|EFP17887.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu003]
 gi|308332875|gb|EFP21726.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu004]
 gi|308336458|gb|EFP25309.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu005]
 gi|308340336|gb|EFP29187.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu006]
 gi|308344191|gb|EFP33042.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu007]
 gi|308348121|gb|EFP36972.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu008]
 gi|308352885|gb|EFP41736.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu009]
 gi|308356698|gb|EFP45549.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu010]
 gi|308360652|gb|EFP49503.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu011]
 gi|308364269|gb|EFP53120.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu012]
 gi|323717843|gb|EGB27034.1| hypothetical protein TMMG_03675 [Mycobacterium tuberculosis
           CDC1551A]
 gi|326905343|gb|EGE52276.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis
           W-148]
 gi|328460274|gb|AEB05697.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis KZN
           4207]
 gi|328864220|gb|AEB53193.1| conserved integral membrane protein YRBE4A [Mycobacterium
           tuberculosis]
          Length = 254

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 26/203 (12%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L++F    ++ + GA  LS  G    +I         ++G ++T +++AG   +A
Sbjct: 56  IPFTVLVAFTLNILLREIGAADLSGAGTAFGTIT--------QLGPVVTVLVVAGAGATA 107

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+  I EEIDA+R +G+D ++ L+ PR+ A      L+ +L N     G    I 
Sbjct: 108 ICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLAST----LVALLLN-----GLVCAIG 158

Query: 288 KYYDIPFAVFFSRFHSTATL--ANIFTGL-------IKAPFMACAIGIVAMKEGFAVGVH 338
                 F+VF    +  A +    + TGL       IKA       G+V    G  V   
Sbjct: 159 LSGGYAFSVFLQGVNPGAFINGLTVLTGLRELILAEIKALLFGVMAGLVGCYRGLTVKGG 218

Query: 339 SNSLGKKVTTCVVQSISIVIIID 361
              +G  V   VV +   + +I+
Sbjct: 219 PKGVGNAVNETVVYAFICLFVIN 241


>gi|311744212|ref|ZP_07718016.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Aeromicrobium marinum DSM 15272]
 gi|311312385|gb|EFQ82298.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Aeromicrobium marinum DSM 15272]
          Length = 279

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 20/204 (9%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V+  ++F  G  +   G   LS+ G   F+  + +    RE+  L+ A+ +A   G  
Sbjct: 68  VGVIAFLAFFAGTGVGLNGYAALSEIGVAKFTAFISAYFNTREVAPLVAAIALAATVGCG 127

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPR-IWALIISLPLLTI--LANFSA------ 278
             A +G+M+I+EEIDA+  MG+  +  L++ R I A I  +PL ++  +A++ A      
Sbjct: 128 YTARLGAMRISEEIDALEVMGVPSLPFLVTTRMIAAFIAVIPLYSVALVASYLAPRLITT 187

Query: 279 -IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            I G S   + +Y I F              +I     K   +A  I ++    G+    
Sbjct: 188 LIYGESAGTYDHYFIQF----------LPPGDILWSFFKLAVLAVGIILIHCYYGYTASD 237

Query: 338 HSNSLGKKVTTCVVQSISIVIIID 361
               +G+ V   +  SI  V++ D
Sbjct: 238 GPAGVGRAVGRAIRTSIVFVVVTD 261


>gi|300782533|ref|YP_003762824.1| ABC transporter permease [Amycolatopsis mediterranei U32]
 gi|41581797|gb|AAS07741.1| putative ABC-transporter integral membrane protein [Amycolatopsis
           mediterranei S699]
 gi|299792047|gb|ADJ42422.1| ABC transport system permease protein [Amycolatopsis mediterranei
           U32]
          Length = 250

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 109/222 (49%), Gaps = 6/222 (2%)

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           L   I+Q +++    +    L++   GAVI+ Q      Q GA+ ++     +  +++  
Sbjct: 26  LREFIQQSWFIASVTILPTALVAIPFGAVISLQFGSLARQLGAQSYTGAGSVLATVQQAS 85

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            L+TA+++AG  GSA+ A+IG+  I EEI A+  +G+  V+ LI PR  A+++   LL  
Sbjct: 86  PLVTALLVAGAGGSAVCADIGARTIREEIAAMEVLGVSAVQRLIVPRTLAMMLVALLLNG 145

Query: 273 LANFSAIIGA---SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329
           + +   ++G    ++V+      P A + + F + A L +++ G +KA        +VA 
Sbjct: 146 MVSVIGVLGGYFFNVVLQG--GTPGA-YLASFSALAQLPDLWVGELKALIFGFIAAVVAS 202

Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
             G         +G  V   VV +  ++ +++ +  + Y  I
Sbjct: 203 YRGLNPSGGPKGVGDAVNQSVVITFLLLFVVNFVITLIYLQI 244


>gi|54022503|ref|YP_116745.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54014011|dbj|BAD55381.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 283

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 76/138 (55%), Gaps = 10/138 (7%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V+++ F+T   G  IA QG   L   G E  +    + L +R    +++ + +A   G+ 
Sbjct: 72  VVIVGFLTLFSGGTIAVQGYSSLGNIGVEALTGFFSAFLNVRIAAPVISGIGLAATIGAG 131

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PL--LTILANFSAIIGASI 284
             A++G+M+++EEIDA+ TM +  V  LI  R+ A +I++ PL  L ++A+F A   A++
Sbjct: 132 STAQLGAMRVSEEIDALETMAIRPVPYLIGTRVLAGMIAIVPLYALAVIASFFAARFATV 191

Query: 285 VIW----KYYDIPFAVFF 298
           VI+      YD  F+ F 
Sbjct: 192 VIYGQSAGVYDHYFSTFL 209


>gi|226305213|ref|YP_002765171.1| YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229490562|ref|ZP_04384400.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
 gi|226184328|dbj|BAH32432.1| putative YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229322382|gb|EEN88165.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
          Length = 286

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 66/116 (56%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V+ ++S  TG V+  QG   L Q G+ + +  L + +  REI  ++ A+ ++   G    
Sbjct: 77  VIAMMSGFTGVVVGLQGFAALEQLGSSVLTGFLSAYVNTREIAPIVAALALSATVGCGFT 136

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           A++G+M+I+EEIDA+  M +  V  L++ R+ A  +++  L I+   +A + + ++
Sbjct: 137 AQLGAMRISEEIDALEVMAVPSVPFLVTTRMIAGFVAVIPLYIVGLLAAYLASRVI 192


>gi|226361226|ref|YP_002779004.1| YrbE family protein [Rhodococcus opacus B4]
 gi|226239711|dbj|BAH50059.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 291

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 85/162 (52%), Gaps = 11/162 (6%)

Query: 168 VPVVILISFVTGAVIAQQG--AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
           V ++  +    GAV+A Q   AF L  FGA    I   S   +R I  ++T +  A ++G
Sbjct: 80  VSLMFFLGLAVGAVVAIQAFMAFDLLGFGALTGIIG--SFGNVRVIAPIITGIGFAAQAG 137

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR-IWALIISLP--LLTILANFSAIIGA 282
             + AEIGSM+I+EEIDA  +MGL  +  ++  R I +++I +P  L+ ++ +F      
Sbjct: 138 CRMTAEIGSMRISEEIDATESMGLQAIPFVVGTRLIGSMLIVIPGYLMALVVSFFT---G 194

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI 324
            ++I  ++  P   +   F    ++ ++   L+KA  + CA+
Sbjct: 195 GLIIKTFHRQPSGTYDHYFSQFLSVPDLMASLLKA-VVFCAV 235


>gi|226361064|ref|YP_002778842.1| YrbE family protein [Rhodococcus opacus B4]
 gi|226239549|dbj|BAH49897.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 286

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 66/116 (56%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V+ ++S  TG V+  QG   L Q G+ + +  L + +  REI  ++ A+ ++   G    
Sbjct: 77  VIAMMSGFTGVVVGLQGFAALEQLGSSVLTGFLSAYVNTREIAPIVAALALSATVGCGFT 136

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           A++G+M+I+EEIDA+  M +  V  L++ R+ A  +++  L I+   +A + + ++
Sbjct: 137 AQLGAMRISEEIDALEVMAVPSVPFLVTTRMIAGFVAVIPLYIVGLLAAYLASRVI 192


>gi|183984957|ref|YP_001853248.1| membrane protein YrbE4A [Mycobacterium marinum M]
 gi|183178283|gb|ACC43393.1| conserved membrane protein YrbE4A [Mycobacterium marinum M]
          Length = 237

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 26/203 (12%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L++F    ++ + GA  LS  G    +I         ++G ++T +++AG   +A
Sbjct: 39  IPFTVLVAFTLNILLREIGAADLSGAGTAFGTIT--------QLGPVVTVLVVAGAGATA 90

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+  I EEIDA+R +G+D ++ L+ PR+ A   S  +  +L      IG S    
Sbjct: 91  ICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLA---STVVALLLNGLVCAIGLS---G 144

Query: 288 KYYDIPFAVFFSRFHSTATL--ANIFTGL-------IKAPFMACAIGIVAMKEGFAVGVH 338
            Y    F+VF    +  A +    + TGL       IKA       G+V    G  V   
Sbjct: 145 GYA---FSVFLQGVNPGAFINGLTVLTGLRELILAEIKALLFGVMAGLVGCYRGLTVKGG 201

Query: 339 SNSLGKKVTTCVVQSISIVIIID 361
              +G  V   VV +   + +I+
Sbjct: 202 PKGVGNAVNETVVYAFICLFVIN 224


>gi|54024946|ref|YP_119188.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54016454|dbj|BAD57824.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 295

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 59/105 (56%)

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           VG    PV++++  V GA+I   G   L   G    +  + ++   RE+  L+ AV  A 
Sbjct: 79  VGGGVAPVLVVMGVVAGAMIGLVGITALDTLGMGPLAGAMSALANPRELAPLIAAVGFAA 138

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267
           ++G  + AEIG+M+I EEIDA+    +D +  ++S R+ A ++++
Sbjct: 139 QAGCRMTAEIGAMRIAEEIDALEAQAIDPIPYVVSTRLLAAVLTV 183


>gi|41406660|ref|NP_959496.1| hypothetical protein MAP0562 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|118465663|ref|YP_879935.1| hypothetical protein MAV_0655 [Mycobacterium avium 104]
 gi|254773611|ref|ZP_05215127.1| hypothetical protein MaviaA2_02900 [Mycobacterium avium subsp.
           avium ATCC 25291]
 gi|41395009|gb|AAS02879.1| hypothetical protein MAP_0562 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|118166950|gb|ABK67847.1| conserved hypothetical protein [Mycobacterium avium 104]
          Length = 254

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 26/203 (12%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L++F    ++ + GA  LS  G    +I         ++G ++T +++AG   +A
Sbjct: 56  IPFTVLVAFTLNILLREIGAADLSGAGTAFGTIT--------QLGPVVTVLVVAGAGATA 107

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+  I EEIDA+R +G+D +  L+ PR+ A  +   LL  L     + G  +   
Sbjct: 108 ICADLGARTIREEIDAMRVLGIDPIHRLVVPRVLASTVVALLLNGLVCAIGLSGGYV--- 164

Query: 288 KYYDIPFAVFFSRFHSTATLAN--IFTGL-------IKAPFMACAIGIVAMKEGFAVGVH 338
                 F+VF    +  A +    + TGL       +KA       G+V    G  V   
Sbjct: 165 ------FSVFLQGVNPGAFINGLTVLTGLRELVLAEVKALLFGVMAGMVGCYRGLTVKGG 218

Query: 339 SNSLGKKVTTCVVQSISIVIIID 361
              +G  V   VV +   + +I+
Sbjct: 219 PKGVGNAVNETVVYAFICLFVIN 241


>gi|226304447|ref|YP_002764405.1| YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229494370|ref|ZP_04388133.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
 gi|226183562|dbj|BAH31666.1| putative YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229318732|gb|EEN84590.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
          Length = 254

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 8/184 (4%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L+SF    ++ + GA  LS  GA + ++         ++G ++T +++AG   +A
Sbjct: 56  IPFTVLVSFTINILLREIGAADLSGAGAALGTVT--------QVGPIVTVLIVAGAGATA 107

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++ +  I EEIDA++ +G++ +  L+ PR+ A      LL  L     I+G  +   
Sbjct: 108 ICADLSARTIREEIDAMKVLGINPIHRLVVPRVLASTGVALLLNGLVCTIGILGGFVFSV 167

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
              D+    F +          +   ++KA       G+VA   G  V   + S+G  V 
Sbjct: 168 FIQDVNPGAFVNGITLLTGFGELMLSMVKAGLFGMIAGLVAAYLGLNVKGGAKSVGDAVN 227

Query: 348 TCVV 351
             VV
Sbjct: 228 QTVV 231


>gi|108797096|ref|YP_637293.1| hypothetical protein Mmcs_0116 [Mycobacterium sp. MCS]
 gi|119866181|ref|YP_936133.1| hypothetical protein Mkms_0125 [Mycobacterium sp. KMS]
 gi|126432719|ref|YP_001068410.1| hypothetical protein Mjls_0106 [Mycobacterium sp. JLS]
 gi|108767515|gb|ABG06237.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
 gi|119692270|gb|ABL89343.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
 gi|126232519|gb|ABN95919.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 265

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 72/128 (56%), Gaps = 12/128 (9%)

Query: 139 TGEFCASSYKFKGFLLS---LIRQMYYVGVS-GVPVVILISFVTGAVIAQQGAFQLSQFG 194
           TG+     ++++ F+L    L R  +   V+  VP+ +LI F    ++A+ GA  +S  G
Sbjct: 33  TGKALFRPFQWREFILQAWFLFRVSFLPTVAVSVPLTVLIIFTLNILLAEFGAADVSGAG 92

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
           A + ++         ++G L+T +++AG   +AI A++G+  I EEIDA+  +G+D +  
Sbjct: 93  AALGAVT--------QLGPLVTVLVVAGAGSTAICADLGARTIREEIDALEVLGIDPIHR 144

Query: 255 LISPRIWA 262
           L+ PR+ A
Sbjct: 145 LVVPRVVA 152


>gi|254818326|ref|ZP_05223327.1| hypothetical protein MintA_00280 [Mycobacterium intracellulare ATCC
           13950]
          Length = 255

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 9/195 (4%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L+SF    ++ + GA  LS  GA   ++         +IG ++T +++AG   +A
Sbjct: 56  IPFTVLVSFTLNILLRELGAADLSGAGAAFGAVT--------QIGPMVTVLIVAGAGSTA 107

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + A++GS  I EEIDA+  +G++ V+ L++PR+ A  +   LL  L     I+G      
Sbjct: 108 MCADLGSRTIREEIDAMEVLGINPVQRLVTPRMLAAGLVALLLNSLVVIIGIVGGYAFSV 167

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-GVHSNSLGKKV 346
              D+    F +       +  +    +KA       G+VA   G  + G  + ++G  V
Sbjct: 168 FIQDVNPGAFAAGITLLTGVPEVIISCVKAALFGLIAGLVACYRGLTITGGGAKAVGNAV 227

Query: 347 TTCVVQSISIVIIID 361
              VV +   +++++
Sbjct: 228 NETVVYAFMSLMVVN 242


>gi|108797253|ref|YP_637450.1| hypothetical protein Mmcs_0273 [Mycobacterium sp. MCS]
 gi|119866338|ref|YP_936290.1| hypothetical protein Mkms_0283 [Mycobacterium sp. KMS]
 gi|126432877|ref|YP_001068568.1| hypothetical protein Mjls_0264 [Mycobacterium sp. JLS]
 gi|108767672|gb|ABG06394.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
 gi|119692427|gb|ABL89500.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
 gi|126232677|gb|ABN96077.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 256

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 9/195 (4%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L+SF    ++ + GA  LS  GA   ++         ++G L+T +++AG   +A
Sbjct: 57  IPFTVLVSFTLNILLRELGAADLSGAGAAFGAVT--------QVGPLVTVLIVAGAGATA 108

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + A++GS  I EEI+A+  +G++ V  L++PR+ A  +   LL  L     I+G      
Sbjct: 109 MCADLGSRTIREEIEAMEVLGINPVARLVTPRMLASGLVALLLNSLVVIIGIVGGYAFSV 168

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV-HSNSLGKKV 346
              D+    F +       +  +    +KA       G+VA   G ++    + ++G  V
Sbjct: 169 FVQDVNPGAFAAGITLLTGIGEVIISCVKAALFGLIAGLVACYRGLSINRGGAKAVGNAV 228

Query: 347 TTCVVQSISIVIIID 361
              VV +   + +I+
Sbjct: 229 NETVVYAFMALFVIN 243


>gi|315442585|ref|YP_004075464.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|315260888|gb|ADT97629.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 237

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 8/194 (4%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L++F    ++ + GA  LS  G    +I         ++G ++T +++AG   +A
Sbjct: 39  IPFTVLVAFTLNILLREIGAADLSGAGTAFGTIT--------QLGPVVTVLVVAGAGATA 90

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+  I EEIDA+R +G+D ++ L+ PR+ A      LL  L     + G  +   
Sbjct: 91  ICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLASTFVALLLNGLVCLIGLSGGYVFSV 150

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
               +    F +       L  +    IKA       G+V    G  V      +G  V 
Sbjct: 151 FLQGVNPGSFINGLTVLTGLPELILAEIKALLFGFVAGLVGCYRGLTVKGGPKGVGNAVN 210

Query: 348 TCVVQSISIVIIID 361
             VV +   + +I+
Sbjct: 211 ETVVYAFICLFVIN 224


>gi|302523372|ref|ZP_07275714.1| ABC-transporter integral membrane protein [Streptomyces sp. SPB78]
 gi|318059764|ref|ZP_07978487.1| ABC-transporter integral membrane protein [Streptomyces sp.
           SA3_actG]
 gi|318075808|ref|ZP_07983140.1| ABC-transporter integral membrane protein [Streptomyces sp.
           SA3_actF]
 gi|302432267|gb|EFL04083.1| ABC-transporter integral membrane protein [Streptomyces sp. SPB78]
          Length = 268

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 65/118 (55%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V+I ++  TG V+  QG   + Q G    +  + +    RE+  L+  + ++   G+ 
Sbjct: 57  VGVMIGMTAATGTVVGLQGFAAMDQIGTAPLTGFVTAYFNTREVAPLVAGLALSATVGAG 116

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
             A++G+M+INEE+DA+  MG+  +  L++ RI A ++++  L  L   S+ + + +V
Sbjct: 117 FTAQLGAMRINEEVDALEGMGIRAMPYLVTTRIIAGVVAIIPLYALGLLSSYVASRVV 174


>gi|323436128|ref|ZP_01050723.2| ABC transporter, permease protein [Dokdonia donghaensis MED134]
 gi|321496443|gb|EAQ38641.2| ABC transporter, permease protein [Dokdonia donghaensis MED134]
          Length = 233

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 8/117 (6%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ----LREIGVLLTAVMIAGRSG 225
           +V  ISF  G V+A Q A  L+     +    L+        + E      ++++AG+ G
Sbjct: 33  IVAFISFFVGGVVAIQTALNLNN---PLIPKSLIGFAARQSVILEFAPTFISIIMAGKVG 89

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           S I + IG+M++ E+IDA+  MG++ +  LI P+I A+++  P +  +A F  IIGA
Sbjct: 90  SFITSSIGTMRVTEQIDALEVMGINSLNYLIFPKIVAMLV-YPFVIAIAMFLGIIGA 145


>gi|315022937|gb|EFT35960.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Riemerella anatipestifer
           RA-YM]
 gi|325336426|gb|ADZ12700.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Riemerella anatipestifer
           RA-GD]
          Length = 253

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 9/137 (6%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G+      K   F   L+R++  +GV+   +V+  S   GAV+A Q     + F A    
Sbjct: 20  GKVIKRPQKHNIFFKLLMREINDLGVNSFGLVLFTSIFVGAVVAIQ---MYNNFKASTIP 76

Query: 200 IDL------MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           I L        ++ + E    + ++++AG+ GS I + IG+M++ E+IDA+  MG++   
Sbjct: 77  IPLYFIGYATKVVLILEFSPTIISLILAGKVGSYIASSIGTMRVTEQIDALDIMGVNSPN 136

Query: 254 ILISPRIWALIISLPLL 270
            LI P+I A +I  PLL
Sbjct: 137 FLILPKIVANVIFNPLL 153


>gi|313206130|ref|YP_004045307.1| hypothetical protein Riean_0637 [Riemerella anatipestifer DSM
           15868]
 gi|312445446|gb|ADQ81801.1| protein of unknown function DUF140 [Riemerella anatipestifer DSM
           15868]
          Length = 253

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 9/137 (6%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G+      K   F   L+R++  +GV+   +V+  S   GAV+A Q     + F A    
Sbjct: 20  GKVIKRPQKHNIFFKLLMREINDLGVNSFGLVLFTSIFVGAVVAIQ---MYNNFKASTIP 76

Query: 200 IDL------MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           I L        ++ + E    + ++++AG+ GS I + IG+M++ E+IDA+  MG++   
Sbjct: 77  IPLYFIGYATKVVLILEFSPTIISLILAGKVGSYIASSIGTMRVTEQIDALDIMGVNSPN 136

Query: 254 ILISPRIWALIISLPLL 270
            LI P+I A +I  PLL
Sbjct: 137 FLILPKIVANVIFNPLL 153


>gi|254820120|ref|ZP_05225121.1| hypothetical protein MintA_09346 [Mycobacterium intracellulare ATCC
           13950]
          Length = 286

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 2/202 (0%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V +V  ++   G+++  QG   LS  G E  +  + + +  R +  L   + ++   G+ 
Sbjct: 74  VGIVGFLTLSGGSLVTIQGYSSLSGIGVEALTGFVSAYVNGRIVTPLTAVIGLSATIGAG 133

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
             A++G+M+INEEIDA+  MG+  +  L+S R+ A ++ +  L  +  + +   A     
Sbjct: 134 TTAQLGAMRINEEIDALEVMGIRSIAYLVSTRVIAGVVVVIPLYCIGLWMSFYAARFATT 193

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
             Y  P  V+   F +     +I   L++A  M   + +V    G+        +G+ V 
Sbjct: 194 SVYGQPTGVYDHYFSTFLQPTDIIWSLLQAVLMGLVVMLVHTYYGYTASGGPAGVGEAVG 253

Query: 348 TCVVQSI--SIVIIIDSLFAIF 367
             V  S+  ++++I+ S  AI+
Sbjct: 254 RAVRSSMVSAVLVILFSSLAIY 275


>gi|149370868|ref|ZP_01890463.1| hypothetical protein SCB49_04265 [unidentified eubacterium SCB49]
 gi|149355654|gb|EDM44212.1| hypothetical protein SCB49_04265 [unidentified eubacterium SCB49]
          Length = 245

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 64/119 (53%), Gaps = 8/119 (6%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ----LREIGVLLTAVMIAGRSG 225
           +V  ISF  G VI  Q A  L+     +    L++       + E      ++++AG+ G
Sbjct: 45  IVAFISFFVGGVITIQTALNLTN---PLIPKSLIAYATRQSIILEFAPTFMSIIMAGKVG 101

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           S I + IGSM++ E+IDA+  MG++ +  L+ P+I A++   PL+  LA F  I+G  I
Sbjct: 102 SFITSSIGSMRVTEQIDALEVMGINSLNYLVFPKIVAMMF-YPLVIALAMFLGIVGGYI 159


>gi|118619947|ref|YP_908279.1| integral membrane protein YrbE6A [Mycobacterium ulcerans Agy99]
 gi|118572057|gb|ABL06808.1| conserved hypothetical integral membrane protein YrbE6A
           [Mycobacterium ulcerans Agy99]
          Length = 281

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 104/213 (48%), Gaps = 2/213 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           IRQ  ++  + +   IL++   GA ++ Q A    Q GA   +     +  +R+   L+ 
Sbjct: 61  IRQASFMAATAIMPTILVALPIGATLSIQFAMLAGQVGATSLAGAASGLTVVRQAASLVA 120

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW-ALIISLPLLTILAN 275
           A+++A   GSAI A++G   + EE DA+  MG+  VR L+ PR+  A++I + L  ++  
Sbjct: 121 AILLAAAVGSAITADLGVRTMREETDAMEMMGVSVVRNLVVPRLLAAMVIGVALCGVVC- 179

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
           F   + + +            F + F + AT  ++   L+KA      + +VA ++G + 
Sbjct: 180 FVGFLASYLFNVYVQGGSAGSFLATFSAFATTGDMILALLKAAVYGFIVTVVACQKGLST 239

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
                 +   V   VV+++ +++I++ + +  Y
Sbjct: 240 RGGPAGVANSVNAAVVEAVLLLMIVNVVVSELY 272


>gi|183980209|ref|YP_001848500.1| integral membrane protein YrbE6A [Mycobacterium marinum M]
 gi|183173535|gb|ACC38645.1| conserved hypothetical integral membrane protein YrbE6A
           [Mycobacterium marinum M]
          Length = 281

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 104/213 (48%), Gaps = 2/213 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           IRQ  ++  + +   IL++   GA ++ Q A    Q GA   +     +  +R+   L+ 
Sbjct: 61  IRQASFMAATAIMPTILVALPIGATLSIQFAMLAGQVGATSLAGAASGLTVVRQAASLVA 120

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW-ALIISLPLLTILAN 275
           A+++A   GSAI A++G   + EE DA+  MG+  VR L+ PR+  A++I + L  ++  
Sbjct: 121 AILLAAAVGSAITADLGVRTMREETDAMEVMGVSVVRNLVVPRLLAAMVIGVALCGVVC- 179

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
           F   + + +            F + F + AT  ++   L+KA      + +VA ++G + 
Sbjct: 180 FVGFLASYLFNVYVQGGSAGSFLATFSAFATTGDMILALLKAAVYGFIVTVVACQKGLST 239

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
                 +   V   VV+++ +++I++ + +  Y
Sbjct: 240 RGGPAGVANSVNAAVVEAVLLLMIVNVVVSELY 272


>gi|118471402|ref|YP_884549.1| ABC transporter transmembrane protein [Mycobacterium smegmatis str.
           MC2 155]
 gi|118172689|gb|ABK73585.1| ABC-transporter integral membrane protein [Mycobacterium smegmatis
           str. MC2 155]
          Length = 289

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 97/194 (50%), Gaps = 19/194 (9%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V +I FVT   G++IA QG   L   G E F+    ++  +R +  ++T   +A   G+ 
Sbjct: 78  VAIIGFVTLSAGSLIAIQGFASLGNIGVEAFTGFFAALANIRVVAPVVTGQALAATVGAG 137

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA---LIISLPLLTILANFSAIIGASI 284
             AE+G+M+I+EE+DA+  MG+  +  L+S RI A   +II L  + IL +F   + A +
Sbjct: 138 ATAELGAMRISEEVDALEVMGIKSISYLVSTRIMAGAIVIIPLYAMAILLSF---MSAQL 194

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMA-------CAIGIVAMKEGFAVGV 337
           V   +Y      +   FH+   + ++    ++   M+       C  G  A   G AVGV
Sbjct: 195 VTTIFYSQSVGTYEHYFHTFLRVDDVMWSFLEVIIMSVIVMLNHCYFGYFA--SGGAVGV 252

Query: 338 HSNSLGKKVTTCVV 351
              ++G+ + T ++
Sbjct: 253 -GEAVGRSMRTSLI 265


>gi|118465348|ref|YP_881277.1| TrnB2 protein [Mycobacterium avium 104]
 gi|118166635|gb|ABK67532.1| TrnB2 protein [Mycobacterium avium 104]
          Length = 282

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 78/149 (52%), Gaps = 7/149 (4%)

Query: 148 KFKGFLLSLIRQMYY----VGVSG--VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSID 201
           ++ G LL LI +M      + V G  V ++  ++  TGA++A QG   LS  G E  +  
Sbjct: 45  RYPGELLRLIAEMGMGTGALAVIGGTVGIIGFLTLTTGALVAVQGYDTLSNIGVEALTGF 104

Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261
           L + L +R I      + +A   G+   A++G+M+INEEIDA+  MG+  V  L S RI 
Sbjct: 105 LSAFLNVRMIAPCTAGLALAATIGAGATAQLGAMRINEEIDALEVMGIRAVTYLASTRII 164

Query: 262 A-LIISLPLLTILANFSAIIGASIVIWKY 289
           A +++ +PL  +    S I    + I+ Y
Sbjct: 165 AGILVVIPLYAVAVLMSFIAAKLLTIYVY 193


>gi|254774785|ref|ZP_05216301.1| TrnB2 protein [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 282

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 78/149 (52%), Gaps = 7/149 (4%)

Query: 148 KFKGFLLSLIRQMYY----VGVSG--VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSID 201
           ++ G LL LI +M      + V G  V ++  ++  TGA++A QG   LS  G E  +  
Sbjct: 45  RYPGELLRLIAEMGMGTGALAVIGGTVGIIGFLTLTTGALVAVQGYDTLSNIGVEALTGF 104

Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261
           L + L +R I      + +A   G+   A++G+M+INEEIDA+  MG+  V  L S RI 
Sbjct: 105 LSAFLNVRMIAPCTAGLALAATIGAGATAQLGAMRINEEIDALEVMGIRAVTYLASTRII 164

Query: 262 A-LIISLPLLTILANFSAIIGASIVIWKY 289
           A +++ +PL  +    S I    + I+ Y
Sbjct: 165 AGILVVIPLYAVAVLMSFIAAKLLTIYVY 193


>gi|126436761|ref|YP_001072452.1| hypothetical protein Mjls_4189 [Mycobacterium sp. JLS]
 gi|126236561|gb|ABN99961.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 285

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 95/202 (47%), Gaps = 2/202 (0%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V +V  ++   G+++  QG   LS  G E  +  + + +  R +  L   + ++   G+ 
Sbjct: 73  VGIVGFLTLTAGSLVTIQGYSSLSDIGVEALTGFVSAYVNGRIVTPLTAVISLSATIGAG 132

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
             A++G+M+INEEIDA+  MG+  V  L S R+ A +I +  L  +A + + + A     
Sbjct: 133 TTAQLGAMRINEEIDALEVMGIRSVAYLASTRVIAGVIVVIPLYCIAVWMSFMSARFATT 192

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
            YY     ++   F +    ++I   L +A  M   + +V    GF        +G+ V 
Sbjct: 193 VYYGQATGIYDHYFSTFLQPSDILWSLFQAVLMGFVVMLVHTYYGFTASGGPAGVGEAVG 252

Query: 348 TCVVQSI--SIVIIIDSLFAIF 367
             V  S+  ++ +I+ +  AI+
Sbjct: 253 RAVRTSLIAAVFVILFASLAIY 274


>gi|41406856|ref|NP_959692.1| hypothetical protein MAP0758 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41395206|gb|AAS03075.1| hypothetical protein MAP_0758 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 281

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 63/106 (59%), Gaps = 4/106 (3%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V+++ F+T   G  +A QG   L   G E  +  L + + +R +  ++  + +A   G+ 
Sbjct: 70  VVIVGFLTLAAGGTLAIQGYTSLGNIGIEALTGFLAAFINVRIVAPVVAGIGLAATFGAG 129

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTI 272
           + A++G+M+INEE+DA+ +M +  V  L+S RI A ++++ PL +I
Sbjct: 130 VTAQLGAMRINEEVDALESMAIRPVAYLVSTRILAGMLAITPLYSI 175


>gi|300784334|ref|YP_003764625.1| ABC transporter permease [Amycolatopsis mediterranei U32]
 gi|299793848|gb|ADJ44223.1| ABC transport system permease protein [Amycolatopsis mediterranei
           U32]
          Length = 283

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 7/136 (5%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V+I ++  TG ++  QG   L+Q G    +  + +    RE+  L   + ++   G    
Sbjct: 74  VMIGMTLFTGLIVGLQGYSALNQLGTAALTGFISAYFNTREVAPLSAGLALSATVGCGFT 133

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTILANFSAIIGASIVIWK 288
           A++G+M+I+EEIDA+  MG+  +  L++ R+ A + + +PL  +    S +    I IW 
Sbjct: 134 AQLGAMRISEEIDALEVMGVPSMPYLVTTRVLAGVAAVIPLYAVGLLSSYLASRQITIWL 193

Query: 289 Y------YDIPFAVFF 298
           Y      YD  F +F 
Sbjct: 194 YGQSAGTYDHYFTLFL 209


>gi|108801582|ref|YP_641779.1| hypothetical protein Mmcs_4619 [Mycobacterium sp. MCS]
 gi|119870736|ref|YP_940688.1| hypothetical protein Mkms_4707 [Mycobacterium sp. KMS]
 gi|108772001|gb|ABG10723.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
 gi|119696825|gb|ABL93898.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
          Length = 254

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 26/203 (12%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L++F    ++ + GA  LS  G    +I         ++G ++T +++AG   +A
Sbjct: 56  IPFTVLVAFTLNILLREIGAADLSGAGTAFGTIT--------QLGPVVTVLVVAGAGATA 107

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+  I EEIDA+R +G+D ++ L+ PR+ A      LL  L     + G  +   
Sbjct: 108 ICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGLAGGYV--- 164

Query: 288 KYYDIPFAVFFSRFHSTATL--ANIFTGL-------IKAPFMACAIGIVAMKEGFAVGVH 338
                 F+VF    +  A +    + TGL       IKA       G+V    G  V   
Sbjct: 165 ------FSVFLQGVNPGAFINGLTVLTGLGELVLAEIKALLFGVVAGLVGCYRGLTVQGG 218

Query: 339 SNSLGKKVTTCVVQSISIVIIID 361
              +G  V   VV +   + +I+
Sbjct: 219 PKGVGIAVNETVVYAFICLFVIN 241


>gi|126437566|ref|YP_001073257.1| hypothetical protein Mjls_5002 [Mycobacterium sp. JLS]
 gi|126237366|gb|ABO00767.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 254

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 56/95 (58%), Gaps = 8/95 (8%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L++F    ++ + GA  LS  G    +I         ++G ++T +++AG   +A
Sbjct: 56  IPFTVLVAFTLNILLREIGAADLSGAGTAFGTIT--------QLGPVVTVLVVAGAGATA 107

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
           I A++G+  I EEIDA+R +G+D ++ L+ PR+ A
Sbjct: 108 ICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLA 142


>gi|54027606|ref|YP_121848.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54019114|dbj|BAD60484.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 287

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 10/180 (5%)

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G  +  QG   L+  G    +  + +    RE+G LL ++  A ++G    A++G+M+I+
Sbjct: 87  GMTVGIQGHTSLNLLGLSPITGAISAFATTRELGPLLASLAFAAQAGCRFTAQLGAMRIS 146

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+ ++ +  +  L+S R++A I+++  L  L    A I  ++ +    D     + 
Sbjct: 147 EEIDALESVAIRPLPYLVSTRMFAAIVAIVPLYCLGLAVAYISCALTVQLVGDTAEGTYQ 206

Query: 299 SRFHSTATLANIFTGLIKA-------PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
             F+      ++   L+KA        F+ C  G  A      VGV +   G+ +  C++
Sbjct: 207 HYFYQFLIPTDVLYSLLKAILFVAITTFIQCYYGFFASGGPEGVGVAA---GRAIKMCII 263


>gi|111023083|ref|YP_706055.1| ABC transporter membrane protein [Rhodococcus jostii RHA1]
 gi|110822613|gb|ABG97897.1| possible ABC transporter integral membrane protein [Rhodococcus
           jostii RHA1]
          Length = 269

 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 58/98 (59%), Gaps = 8/98 (8%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P+ +LI+   G++          Q GAE ++  ++  + + +   L+ A+M+AG  GSA
Sbjct: 67  IPIGVLIAVTIGSLA--------GQLGAEGYTGAVVGFVIVGQASALVCALMLAGVGGSA 118

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
           I A++GS  I EE++A+  +GL+ +  L+ PR+ A +I
Sbjct: 119 ICADLGSRTIREEVEAMEVLGLNVIERLVVPRVLAAVI 156


>gi|225712538|gb|ACO12115.1| UPF0393 membrane protein RBE_1340 [Lepeophtheirus salmonis]
          Length = 215

 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 79/155 (50%), Gaps = 11/155 (7%)

Query: 135 VISNTGEFCASSY-------KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
           +I + G++    Y       K K +   +I +MY +G+  +P V  +S   GA++  Q +
Sbjct: 3   IIEHVGKYTTLVYQALQPAEKKKVYYQQIIYEMYELGIKSIPFVAFVSIFVGAILTLQTS 62

Query: 188 FQLSQFGAEIFSIDLMSILQLR-EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
             +       + +   +   +  E    + ++++AG+ GS I + IG+M++ E+IDA+  
Sbjct: 63  ANIKNPLIPKYLVGFATRESIMVEFSPTIISLLLAGKIGSNIASGIGTMRVTEQIDALEI 122

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281
           MG++    LI P+I AL++  P +    + S IIG
Sbjct: 123 MGVNSAGYLIYPKIVALMLINPFII---SLSIIIG 154


>gi|126436743|ref|YP_001072434.1| hypothetical protein Mjls_4171 [Mycobacterium sp. JLS]
 gi|126236543|gb|ABN99943.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 284

 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 118/229 (51%), Gaps = 22/229 (9%)

Query: 149 FKGFLLSLIRQMYYVGVSGVPVV----ILISFVT---GAVIAQQGAFQLSQFGAEIFSID 201
           ++  ++ LI QM  +GV  + V+    +++ F+T   G++IA Q   QL Q G E  +  
Sbjct: 48  YRTEVVRLIAQMS-LGVGALAVIGGTIVIVGFLTLSAGSLIAVQAYSQLQQVGVEALAGF 106

Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261
             + L +R +  L+  + +A   G+   A++G+M+I+EE+DA+  MG+  V  L S R+ 
Sbjct: 107 TSAFLNVRLVSPLVAGIGLAATIGAGATAQLGAMRISEEVDALEVMGIRSVAYLASSRVL 166

Query: 262 A-LIISLPL--LTILANFSAI-IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
           A +I+ +PL  + +LA F+A   G ++V    Y     V+   F++     ++    ++A
Sbjct: 167 AGVIVVIPLYCIAVLAAFAATRTGTTLV----YGQSTGVYDHYFYTFLNPTDLIYSFLQA 222

Query: 318 PFMACAIGIVAMKEGFA-----VGVHSNSLGKKVTTCVVQSISIVIIID 361
             MA  + +V    GF       GV   ++G+ V T +V ++ + + + 
Sbjct: 223 ISMAVVVMLVHTYYGFTATGGPAGV-GEAVGRAVRTSLVAAVFVTLFVS 270


>gi|315635511|ref|ZP_07890777.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Arcobacter butzleri JV22]
 gi|315480269|gb|EFU70936.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Arcobacter butzleri JV22]
          Length = 91

 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 49/83 (59%)

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
           D+ F  F +R H+   L ++  G+ KA F   AI I+    GF V  ++ S+GK  T  V
Sbjct: 9   DVTFIEFINRLHNEVPLKHLILGVFKALFFGFAIAIIGCYRGFQVQNNTTSIGKFTTMSV 68

Query: 351 VQSISIVIIIDSLFAIFYFAIGI 373
           V +I +VI+ID++F++ +  +GI
Sbjct: 69  VNAIFVVILIDAVFSVIFTQMGI 91


>gi|300775379|ref|ZP_07085241.1| ABC superfamily ATP binding cassette transporter permease protein
           [Chryseobacterium gleum ATCC 35910]
 gi|300506119|gb|EFK37255.1| ABC superfamily ATP binding cassette transporter permease protein
           [Chryseobacterium gleum ATCC 35910]
          Length = 250

 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 72/137 (52%), Gaps = 9/137 (6%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G+      K + F    +R++  +GV+   +V+  S   GAV+A Q     + F A  F 
Sbjct: 17  GKSLQKPQKMRVFWKLFMREINDLGVNSFGLVVFTSIFVGAVVAIQ---MFNNFDASSFP 73

Query: 200 IDLMSI------LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           I    +      + + E    + ++++AG+ GS I + IG+M+++E+IDA+  MG++   
Sbjct: 74  IPTSFVGYATKAVLVLEFSPTIISLILAGKVGSYIASSIGTMRVSEQIDALDIMGVNSPN 133

Query: 254 ILISPRIWALIISLPLL 270
            LI P+I A ++  PLL
Sbjct: 134 FLIFPKIVACVLFNPLL 150


>gi|118469944|ref|YP_887173.1| hypothetical protein MSMEG_2853 [Mycobacterium smegmatis str. MC2
           155]
 gi|118171231|gb|ABK72127.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
           155]
          Length = 270

 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 27/204 (13%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L+SF    ++ + GA  LS  GA   ++         ++G ++T +++AG   +A
Sbjct: 71  IPFTVLVSFTLNILLRELGAADLSGAGAAFGAVT--------QVGPMVTVLIVAGAGATA 122

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + A++GS  I +EIDA+  +G++ ++ L++PRI A  +   LL  L     I+G      
Sbjct: 123 MCADLGSRTIRDEIDAMEVLGINPIQRLVTPRILASGLVALLLNSLVVIIGILGG----- 177

Query: 288 KYYDIPFAVFFSRFHSTATLANI--FTGL-------IKAPFMACAIGIVAMKEGFAV-GV 337
             Y   F+VF    +  A  A I   TG+       IKA       G+VA   G  + G 
Sbjct: 178 --YT--FSVFIQGVNPGAFAAGITLLTGVPEVIISCIKAMLFGFIAGMVACFRGLTIAGG 233

Query: 338 HSNSLGKKVTTCVVQSISIVIIID 361
            + ++G  V   VV +   + +++
Sbjct: 234 GAKAVGNAVNETVVYAFMALFVVN 257


>gi|254447411|ref|ZP_05060877.1| ABC transporter permease protein [gamma proteobacterium HTCC5015]
 gi|198262754|gb|EDY87033.1| ABC transporter permease protein [gamma proteobacterium HTCC5015]
          Length = 290

 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 73/140 (52%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           Q+Y+ G   +     ++ V GA++  Q + QL   G       ++ ++ +RE+  L+TA 
Sbjct: 70  QVYHTGFKALGTATPLAVVAGALVIFQASNQLYIVGGREHIGQIVIMIVVRELAPLVTAF 129

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++  RSG+A+  E+ +M+ N EI+++  +G+     ++ PRI A +I+   L      +A
Sbjct: 130 IVIARSGTAVATEVANMRANHEIESLEALGIHPYAYVVFPRIMAGMIATICLAFYFMVAA 189

Query: 279 IIGASIVIWKYYDIPFAVFF 298
           + G   V   + ++  + +F
Sbjct: 190 MYGGYFVTVPWSNLNVSTYF 209


>gi|296394454|ref|YP_003659338.1| hypothetical protein Srot_2051 [Segniliparus rotundus DSM 44985]
 gi|296181601|gb|ADG98507.1| protein of unknown function DUF140 [Segniliparus rotundus DSM
           44985]
          Length = 280

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 61/121 (50%)

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           ++G+  I EEIDA+R +G++  + L++PR+ A+++  PLL +   F  +    I+   Y 
Sbjct: 134 DLGARTIREEIDAMRVIGINPTQRLVAPRLAAMLLVAPLLCLFIVFITMAAGYILAVMYQ 193

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
           D+    +     + A L++++  + KA F    + ++A + G         + + V   V
Sbjct: 194 DVTPGSYLGSLGAFAKLSDVYVAVGKALFFGVVVVVIACQRGLETKFGPRGVAESVNAAV 253

Query: 351 V 351
           V
Sbjct: 254 V 254


>gi|4580939|gb|AAD24544.1| YrbE1A [Mycobacterium leprae]
          Length = 112

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 8/115 (6%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P+ +L+ F    ++AQ  A  LS  GA I ++         ++G L T +++AG   ++
Sbjct: 3   IPLTVLLIFTLNVLLAQFSAADLSGAGAAIGAVT--------QLGPLTTVLVVAGAGSTS 54

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           I A++G+  I EEIDA+  +G+D +  L+ PR+ A  +   LL  L     ++G 
Sbjct: 55  ICADLGARTIREEIDAMEVLGIDPIHRLVVPRVLAATLVATLLNGLVITVGLVGG 109


>gi|229494350|ref|ZP_04388113.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
 gi|229318712|gb|EEN84570.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
          Length = 284

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 1/88 (1%)

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q GA    Q GA  +S  +++ L + + G L+ A++IAG  GSAI A++G+  I EEIDA
Sbjct: 91  QIGALA-DQIGAGAYSGAVVAFLIIGQAGPLVCALIIAGVGGSAICADLGARTIREEIDA 149

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLT 271
           +  +GL  +  L+ PR+ A+ +   LL 
Sbjct: 150 LEVLGLPVLERLVVPRMIAIAVVCLLLN 177


>gi|168702230|ref|ZP_02734507.1| hypothetical protein GobsU_22062 [Gemmata obscuriglobus UQM 2246]
          Length = 256

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 70/127 (55%), Gaps = 6/127 (4%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +R  Y V + G+P+ ++     G VI       L++ G    +++ +       + + L 
Sbjct: 36  LRPFYSVTIGGLPLALVTGLALGVVIWMHTRDVLARTGTG--AVEYLPTFLAAAVLLELA 93

Query: 217 AV----MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            V    ++A R+G+++ AE+ SM+++E+IDA+  +G+  +R L+ PRI A + + PLL +
Sbjct: 94  PVGAGLIVAARTGASLGAELASMRVSEQIDAMELLGVSTIRALVGPRIVACVFAAPLLHV 153

Query: 273 LANFSAI 279
           L   +A+
Sbjct: 154 LIAATAL 160


>gi|150025444|ref|YP_001296270.1| ABC transporter permease [Flavobacterium psychrophilum JIP02/86]
 gi|149771985|emb|CAL43461.1| Probable ABC-type transport system, permease component
           [Flavobacterium psychrophilum JIP02/86]
          Length = 248

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 64/116 (55%), Gaps = 2/116 (1%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTAVMIAGRSGSAI 228
           +V  ISF  G V+A Q A  L+      + I   +   +  E      ++++AG+ GS I
Sbjct: 48  IVAFISFFVGGVVAIQTALNLTNPLIPKYLIGFATRQSIILEFAPTFISIIMAGKMGSFI 107

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
            + IG+M++ E+IDA+  MG++ +  L+ P++ AL++  P L  +A F  I+G  I
Sbjct: 108 TSSIGTMRVTEQIDALEVMGVNSLNYLVFPKLIALLLY-PFLIGIAMFLGILGGYI 162


>gi|296163927|ref|ZP_06846563.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295900708|gb|EFG80078.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 283

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 68/115 (59%), Gaps = 7/115 (6%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V +I FVT   G++IA QG   L   G E F+    ++  +R +  ++T   +A   G+ 
Sbjct: 72  VAIIGFVTLSAGSLIAIQGFASLGNIGVEAFTGFFAALANVRVVAPIVTGTALAATVGAG 131

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPR-IWALIISLPLLTI---LANFSA 278
             A++G+M+I+EEIDA+  MG+  V  L+S R I A I+++PL ++   L+ FSA
Sbjct: 132 ATAQLGAMRISEEIDALEVMGIKSVSYLVSTRVIGAFIVTIPLYSVAVLLSFFSA 186


>gi|254818327|ref|ZP_05223328.1| hypothetical protein MintA_00285 [Mycobacterium intracellulare ATCC
           13950]
          Length = 261

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 60/104 (57%), Gaps = 1/104 (0%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +V  ++   G V+A QG   L   G E  +  L + + +R    ++  + +A   G+ + 
Sbjct: 52  IVGFMTLAAGGVLAVQGYSSLGNIGIEALTGFLSAFINVRIAAPIVAGIGLAATFGAGVT 111

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTI 272
           A++G+M+INEEIDA+ +M +  V  L+S RI A ++++ PL +I
Sbjct: 112 AQLGAMRINEEIDALESMAIRPVSYLVSTRIVAGMLAVTPLYSI 155


>gi|54027082|ref|YP_121324.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54018590|dbj|BAD59960.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 288

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 14/199 (7%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V++ +S   G V+  QG   L   G+ + +  L + +  REI  L+ A+ ++   G    
Sbjct: 79  VIVFMSGSVGVVVGLQGFKALDAIGSSVLTGFLTAYINTREIAPLVAALALSATVGCGFT 138

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA-SIVIW- 287
           A++G+M+I+EEIDA+  M +  V  L++ R+ A  +++  L I+    A   + SI IW 
Sbjct: 139 AQLGAMRISEEIDALEVMAVPGVPFLVTTRVIAGFLAVIPLYIVGLLGAYFASRSISIWF 198

Query: 288 -----KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
                  YD  F++F           ++    +K    A  I +V    GF        +
Sbjct: 199 NGQSSGSYDHYFSLFLPP-------EDVLYSFLKVLVFAFVIILVHCYYGFTATGGPAGV 251

Query: 343 GKKVTTCVVQSISIVIIID 361
           G  V   V  +I +V ++D
Sbjct: 252 GVAVGRAVRAAIVLVNVLD 270


>gi|311744833|ref|ZP_07718629.1| ABC superfamily ATP binding cassette transporter membrane protein
           [Aeromicrobium marinum DSM 15272]
 gi|311311950|gb|EFQ81871.1| ABC superfamily ATP binding cassette transporter membrane protein
           [Aeromicrobium marinum DSM 15272]
          Length = 292

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 62/123 (50%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V+  + F TG  +  QG   L Q G    S  + +    REI  ++  + +A   G  
Sbjct: 81  VGVIAAMCFFTGTEVGLQGYAALDQLGTSALSGFVSAYFNTREIAPIVAGIALAATVGCG 140

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
             A++G+M+I+EE+DA+  M +  +  L++ R+ A +I++  L I+   S+     + + 
Sbjct: 141 FTAQLGAMRISEEVDALEVMAIPSLPFLVTTRVIAGLIAVIPLYIVGLLSSYFATRLTVT 200

Query: 288 KYY 290
           + Y
Sbjct: 201 QVY 203


>gi|254773836|ref|ZP_05215352.1| TrnB2 protein [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 281

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 62/106 (58%), Gaps = 4/106 (3%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V+++ F+T   G  +A QG   L   G E  +  L + + +R    ++  + +A   G+ 
Sbjct: 70  VVIVGFLTLAAGGTLAIQGYTSLGNIGIEALTGFLAAFINVRIAAPVVAGIGLAATFGAG 129

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTI 272
           + A++G+M+INEE+DA+ +M +  V  L+S RI A ++++ PL +I
Sbjct: 130 VTAQLGAMRINEEVDALESMAIRPVAYLVSTRILAGMLAITPLYSI 175


>gi|118466445|ref|YP_880208.1| TrnB2 protein [Mycobacterium avium 104]
 gi|118167732|gb|ABK68629.1| TrnB2 protein [Mycobacterium avium 104]
          Length = 281

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 62/106 (58%), Gaps = 4/106 (3%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V+++ F+T   G  +A QG   L   G E  +  L + + +R    ++  + +A   G+ 
Sbjct: 70  VVIVGFLTLAAGGTLAIQGYTSLGNIGIEALTGFLAAFINVRIAAPVVAGIGLAATFGAG 129

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTI 272
           + A++G+M+INEE+DA+ +M +  V  L+S RI A ++++ PL +I
Sbjct: 130 VTAQLGAMRINEEVDALESMAIRPVAYLVSTRILAGMLAITPLYSI 175


>gi|325674885|ref|ZP_08154572.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Rhodococcus equi ATCC 33707]
 gi|325554471|gb|EGD24146.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Rhodococcus equi ATCC 33707]
          Length = 280

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 86/169 (50%), Gaps = 6/169 (3%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V +V  ++  TG  IA QG   L   G E  +    + + +R    ++  + +A   G+ 
Sbjct: 69  VVIVGFLTLFTGGTIAVQGFSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGLAATIGAG 128

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PL--LTILANFSAIIGASI 284
             A++G+M+++EEIDA+ +M +  V  L+S R+ A +I++ PL  L ++A+F A   A++
Sbjct: 129 STAQLGAMRVSEEIDALESMAIPSVPYLVSTRVMAGMIAIVPLYSLAVIASFVASRFATV 188

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
            +   YD    V+   F +     +I     +A  MA A+ ++    GF
Sbjct: 189 FL---YDQSPGVYDHYFSTFLNPTDILWSFAQAIAMALAVMLIHTYYGF 234


>gi|226304168|ref|YP_002764126.1| YrbE family protein [Rhodococcus erythropolis PR4]
 gi|226183283|dbj|BAH31387.1| putative YrbE family protein [Rhodococcus erythropolis PR4]
          Length = 259

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 50/81 (61%)

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
            Q GA  +S  +++ L + + G L+ A++IAG  GSAI A++G+  I EEIDA+  +GL 
Sbjct: 72  DQIGAGSYSGAVVAFLIIGQAGPLVCALIIAGVGGSAICADLGARTIREEIDALEVLGLP 131

Query: 251 FVRILISPRIWALIISLPLLT 271
            +  L+ PR+ A+ +   LL 
Sbjct: 132 VLERLVVPRMIAIAVVCLLLN 152


>gi|295135743|ref|YP_003586419.1| ABC-type transporter permease protein [Zunongwangia profunda
           SM-A87]
 gi|294983758|gb|ADF54223.1| ABC-type transporter permease protein [Zunongwangia profunda
           SM-A87]
          Length = 225

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 8/119 (6%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ----LREIGVLLTAVMIAGRSG 225
           +V  +SF  GAV+A Q A  L+     +    L++       + E      ++++AG+ G
Sbjct: 25  IVCFLSFFIGAVVAIQTALNLNN---PLIPKSLVAFAARQSVILEFSPTFISIIMAGKVG 81

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           S I + IGSM++ E+IDA+  MG++    LI P+I A+ ++ P +  ++ F  I+GA +
Sbjct: 82  SFITSSIGSMRVTEQIDALEVMGINSKNYLIFPKIIAM-LTYPFVIAISMFLGILGAYV 139


>gi|120401936|ref|YP_951765.1| hypothetical protein Mvan_0921 [Mycobacterium vanbaalenii PYR-1]
 gi|119954754|gb|ABM11759.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 284

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 23/203 (11%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           ++++ F+T   GA+IA QG   L+  G E  +    + L +R IG L T + +A   G+ 
Sbjct: 73  IVIVGFLTMSAGALIAVQGYNTLAGVGVEALTGFASAYLNVRIIGPLTTGIGLAATIGAG 132

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL--LTILANF-------S 277
             A++G+M+I EEIDA+  MG+  +  L S R+ A +I+ +PL  + +L +F       +
Sbjct: 133 ATAQLGAMRIAEEIDALEVMGVRSIAYLASTRLLAGMIVVIPLYCVAVLMSFVAARVGTT 192

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           AI G S  ++ +Y   F  F +         ++    ++A  MA  + ++    GF    
Sbjct: 193 AIYGQSTGVYDHY---FTTFLNPL-------DLVWSFVQAIAMAVTVMVIHTYYGFNASG 242

Query: 338 HSNSLGKKVTTCVVQSISIVIII 360
               +G+ V   V  S+ +V+ +
Sbjct: 243 GPAGVGEAVGRAVRASLIVVVFV 265


>gi|226365583|ref|YP_002783366.1| YrbE family protein [Rhodococcus opacus B4]
 gi|226244073|dbj|BAH54421.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 286

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 88/192 (45%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           VV  +S V    +  +G   L   G    S  L +IL  RE+  ++ ++ +A + G+   
Sbjct: 75  VVFAMSAVAATQVGIEGLRGLDLLGMGSLSGLLSAILNTRELAPVIASIALAAKVGTGFT 134

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A++G+M+I+EEI A+  M +  +  L S R+ + +I +  L ++   S+ + + +VI  +
Sbjct: 135 AQLGAMRISEEISALDAMAIPSLPFLASTRLVSCLICVVPLYVVGLLSSYLASRLVIVTF 194

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
                  +   FH   T  ++    +KA   A  I +V    G+        +G+     
Sbjct: 195 SGQSAGTYDYYFHLMLTPTDVAYSFVKAVVFATIIALVHCSYGYHAYGGPEGVGRAAGRA 254

Query: 350 VVQSISIVIIID 361
           +  SI  + I+D
Sbjct: 255 LRTSILAIGIVD 266


>gi|111023084|ref|YP_706056.1| hypothetical protein RHA1_ro06121 [Rhodococcus jostii RHA1]
 gi|110822614|gb|ABG97898.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
          Length = 286

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 88/192 (45%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           VV  +S V    +  +G   L   G    S  L +IL  RE+  ++ ++ +A + G+   
Sbjct: 75  VVFAMSAVAATQVGIEGLRGLDLLGMGSLSGLLSAILNTRELAPVIASIALAAKVGTGFT 134

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A++G+M+I+EEI A+  M +  +  L S R+ + +I +  L ++   S+ + + +VI  +
Sbjct: 135 AQLGAMRISEEISALDAMAIRSLPFLASTRLVSCLICVVPLYVVGLLSSYLASRLVIVTF 194

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
                  +   FH   T  ++    +KA   A  I +V    G+        +G+     
Sbjct: 195 GGQSAGTYDYYFHLMLTPTDVAYSFVKAVVFATIIALVHCSYGYHAHGGPEGVGRAAGRA 254

Query: 350 VVQSISIVIIID 361
           +  SI  + I+D
Sbjct: 255 LRTSILAIGIVD 266


>gi|326382400|ref|ZP_08204092.1| putative YrbE family protein [Gordonia neofelifaecis NRRL B-59395]
 gi|326199130|gb|EGD56312.1| putative YrbE family protein [Gordonia neofelifaecis NRRL B-59395]
          Length = 268

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/213 (22%), Positives = 98/213 (46%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           R    VG     V++++    GA I  QG   L   G    +  + S    RE+  ++ A
Sbjct: 47  RGAVLVGGGTAVVLVILGMAVGASIGIQGYASLDLVGMGSLTGFISSYANTRELAPMIAA 106

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +  A ++G  + AEIGSM+I EEIDA+ +M +  +  ++S R+ A I ++  L I+    
Sbjct: 107 IGFAAQAGCRLTAEIGSMRIAEEIDALESMAVRPIPYVVSTRVVAAITTIIPLYIVTLIL 166

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           + + A +V+   +      +   F++     ++   +IK      ++ IV   +GF    
Sbjct: 167 SFVAAKLVVILMHGQSGGTYDFYFNAFLKPQDLVFSVIKVLIFVVSVVIVHSYQGFYATG 226

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            +  +G+     +  S+ ++++ D +  +  + 
Sbjct: 227 GAEGVGRASGRAIRSSLIVIVVEDMILTLLMWG 259


>gi|302525561|ref|ZP_07277903.1| ABC transporter integral membrane protein [Streptomyces sp. AA4]
 gi|302434456|gb|EFL06272.1| ABC transporter integral membrane protein [Streptomyces sp. AA4]
          Length = 286

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 10/189 (5%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V+I ++  TG ++  QG   L+Q G    +  + +    RE+  L   + ++   G    
Sbjct: 77  VMIGMTLFTGLIVGLQGYSALNQLGTAALTGFISAYFNTREVAPLSAGLALSATVGCGFT 136

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTILANFSAIIGASIVIWK 288
           A++G+M+I+EEIDA+  M +  +  L++ R+ A + + +PL  +    S +    I IW 
Sbjct: 137 AQLGAMRISEEIDALEVMAVPSMPYLVTTRVLAGVTAVIPLYAVGLLSSYLASRQITIWL 196

Query: 289 Y------YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
           Y      YD  F +F        + A +    +      C  G  A      VG+   ++
Sbjct: 197 YGQSAGTYDHYFTLFLPPEDVLWSFAKVIVFSVLVILSHCYYGYTASGGPAGVGI---AV 253

Query: 343 GKKVTTCVV 351
           G+ V T +V
Sbjct: 254 GRAVRTSIV 262


>gi|326331672|ref|ZP_08197960.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
 gi|325950471|gb|EGD42523.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
          Length = 277

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 6/212 (2%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           R    VG   + V++L+S   G  +  +G   L   G       + +    RE+G L+ A
Sbjct: 56  RGAIIVGGGTIGVMVLLSVSVGTSLGIEGFNGLELVGLAPLVGFISATANTRELGPLVAA 115

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTILANF 276
           + +  + G    A++G+M++NEE+DA+  M +  V  L++ R+ A ++++ PL  I    
Sbjct: 116 LALGAQVGCRFTAQLGAMRVNEEVDALEVMSVRPVNYLVATRLVATMLAIVPLYVIGLLG 175

Query: 277 SAIIGASIVIWKYYDIP--FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
           S I   S V+  +   P  F  +F  F    T+ +I   LIK    A  + ++    G A
Sbjct: 176 SYIASESTVVMLFGQSPGQFDHYFLEF---LTMRDIGFSLIKILIFAAIVVLIHCWYGLA 232

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           V   S ++G+     +  S  ++++++ L  +
Sbjct: 233 VSAGSLNVGEATGRSIRASFVVIVVLNMLLTV 264


>gi|312138209|ref|YP_004005545.1| integral membrane protein yrbe2b [Rhodococcus equi 103S]
 gi|311887548|emb|CBH46860.1| putative integral membrane protein YrbE2B [Rhodococcus equi 103S]
          Length = 283

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 86/169 (50%), Gaps = 6/169 (3%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V +V  ++  TG  IA QG   L   G E  +    + + +R    ++  + +A   G+ 
Sbjct: 72  VVIVGFLTLFTGGTIAVQGFSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGLAATIGAG 131

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PL--LTILANFSAIIGASI 284
             A++G+M+++EEIDA+ +M +  V  L+S R+ A +I++ PL  L ++A+F A   A++
Sbjct: 132 STAQLGAMRVSEEIDALESMAIPSVPYLVSTRVMAGMIAIVPLYSLAVIASFVASRFATV 191

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
            +   YD    V+   F +     +I     +A  MA A+ ++    GF
Sbjct: 192 FL---YDQSPGVYDHYFSTFLNPTDILWSFAQAIAMALAVMLIHTYYGF 237


>gi|146298213|ref|YP_001192804.1| hypothetical protein Fjoh_0449 [Flavobacterium johnsoniae UW101]
 gi|146152631|gb|ABQ03485.1| protein of unknown function DUF140 [Flavobacterium johnsoniae
           UW101]
          Length = 248

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 2/114 (1%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTAVMIAGRSGSAI 228
           +V  ISF  G V+A Q A  L+      + I   +   +  E      +V++AG+ GS I
Sbjct: 48  IVCFISFFIGGVVAIQTALNLTNPLIPKYLIGFATRQSVVLEFAPTFISVIMAGKMGSYI 107

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
            + IG+M++ E+IDA+  MG++ V  L+ P+I AL++  P +  ++ F  I G 
Sbjct: 108 TSSIGTMRVTEQIDALEVMGVNSVNYLVFPKIIALLMY-PFVIGISMFLGIFGG 160


>gi|126436262|ref|YP_001071953.1| hypothetical protein Mjls_3685 [Mycobacterium sp. JLS]
 gi|126236062|gb|ABN99462.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 285

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 97/198 (48%), Gaps = 7/198 (3%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           ++++ F+T   G  +A QG   L   G E  +  L + + +R     +  + +A   G+ 
Sbjct: 74  LVIVGFLTLAAGGTLAVQGFSSLGDIGIEALTGFLAAFINVRIAAPTVAGIGLAATFGAG 133

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + A++G+M+INEEIDA+ +M +  V  L+S RI A +I++  L  +A   + + +  V  
Sbjct: 134 VTAQLGAMRINEEIDALESMAIRPVEYLVSTRIAAGMIAITPLYAIAVILSFLASQFVTV 193

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG-FAVGVHSN---SLG 343
             +     ++   F +     ++    ++A  MA  I +V    G FA G  S    ++G
Sbjct: 194 MLFGQSGGLYDHYFDTFLNPIDLLWSFLQAVLMAITILLVHTYFGYFASGGPSGVGVAVG 253

Query: 344 KKVTTCVVQSISIVIIID 361
             V T ++  +S+ +++ 
Sbjct: 254 NAVRTSLILVVSVTLLVS 271


>gi|226304448|ref|YP_002764406.1| YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229494442|ref|ZP_04388205.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
 gi|226183563|dbj|BAH31667.1| putative YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229318804|gb|EEN84662.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
          Length = 283

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 7/138 (5%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V +V  ++  TG  IA QG   L   G E  +    + + +R    ++  + +A   G+ 
Sbjct: 72  VVIVGFLTLFTGGTIAVQGYSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGLAATIGAG 131

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPL--LTILANFSAIIGASI 284
             A++G+M+++EEIDA+ TM +  +  L+S R+ A +I+ +PL  L ++A+F A   A++
Sbjct: 132 STAQLGAMRVSEEIDALETMAIPSIPYLVSTRVMAGMIAIIPLYSLAVIASFVASRFATV 191

Query: 285 VIWK----YYDIPFAVFF 298
            ++      YD  F  F 
Sbjct: 192 FLYNQSGGVYDHYFTTFL 209


>gi|183984679|ref|YP_001852970.1| hypothetical protein MMAR_4711 [Mycobacterium marinum M]
 gi|183178005|gb|ACC43115.1| conserved hypothetical membrane protein [Mycobacterium marinum M]
          Length = 281

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 59/104 (56%), Gaps = 1/104 (0%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +V  ++   G  +A QG   L   G E  +  L + + +R    ++  + +A   G+ + 
Sbjct: 72  IVGFLTLAAGGTLAVQGYSSLGNIGIEALTGFLAAFINVRIAAPIVAGIGLAATFGAGVT 131

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTI 272
           A++G+M+INEEIDA+ +M +  V  L+S RI A ++++ PL +I
Sbjct: 132 AQLGAMRINEEIDALESMAIRPVSYLVSTRIVAGMMAITPLYSI 175


>gi|296141836|ref|YP_003649079.1| hypothetical protein Tpau_4171 [Tsukamurella paurometabola DSM
           20162]
 gi|296029970|gb|ADG80740.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM
           20162]
          Length = 285

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 63/112 (56%), Gaps = 3/112 (2%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +++++    G  +A Q    L   G    +  + ++  +RE   +L A   A ++G  + 
Sbjct: 76  MMVVLGLAVGGTVAVQAFSTLDLLGMGPLTGSISALANIREFAPILAAAGFAVQAGCRMT 135

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLP--LLTILANFSA 278
           AEIG+M+INEEIDA+ ++GL  +  ++S R+ A LI  +P  L+ I+ +F A
Sbjct: 136 AEIGAMRINEEIDALESLGLRSISFVVSTRVLAGLIAVIPTFLIAIVVSFFA 187


>gi|317508868|ref|ZP_07966507.1| hypothetical protein HMPREF9336_02879 [Segniliparus rugosus ATCC
           BAA-974]
 gi|316252829|gb|EFV12260.1| hypothetical protein HMPREF9336_02879 [Segniliparus rugosus ATCC
           BAA-974]
          Length = 304

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 76/158 (48%)

Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268
           RE+  ++TA+  A ++G  I AE+G+M+I+EEIDAI   G+  +  +I+ R+ A +IS+ 
Sbjct: 134 RELAPMVTAIGFAAQTGCRITAEVGAMRISEEIDAIEAQGIQSIPFVITTRVIAGVISII 193

Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328
            L ++      +  + V+   +      ++  F S     ++   ++KA     AI  + 
Sbjct: 194 PLYVMTTLLGYVSCAFVVNVVHGEASGTYYHYFDSFIHPIDVVYSVVKAIVFVVAIIAIH 253

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
             +G+        +G      +  S+  V++ D +  I
Sbjct: 254 GYQGYYASGGPEGVGVAAGRAIRTSLITVVVADMVLTI 291


>gi|169628783|ref|YP_001702432.1| hypothetical protein MAB_1693 [Mycobacterium abscessus ATCC 19977]
 gi|169240750|emb|CAM61778.1| Conserved hypothetical protein (YrbE family?) [Mycobacterium
           abscessus]
          Length = 289

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 103/213 (48%), Gaps = 2/213 (0%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +RQ  ++  + V   +L++   G  ++ Q A    Q GA   +     +  +R+   L+ 
Sbjct: 69  VRQAAFMAGTAVMPTVLVALPIGVTLSIQFALLAGQVGATSLAGAASGLAVVRQAASLVA 128

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A+++A   GSA+ A++G   + EE  A+  MG+  VR L+ PR  A I+    LT +  F
Sbjct: 129 AMLLASAVGSAMTADLGCRTMREETAAMEVMGVSVVRRLVVPRFAAAIVIGIALTGVVCF 188

Query: 277 SAIIGASIV-IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              + + +  ++     P + F S F S AT A++   L KA      + ++A ++G A 
Sbjct: 189 VGFLASYLFNVFVQGGAPGS-FVSTFASFATPADLLLALFKAAAYGAIVAVIACQKGLAA 247

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
                 +   V   VV+S+ +++I++ + +  Y
Sbjct: 248 HGGPTGVANSVNAAVVESVLLLMIVNVVVSQVY 280


>gi|319950491|ref|ZP_08024404.1| putative YrbE family protein [Dietzia cinnamea P4]
 gi|319435850|gb|EFV91057.1| putative YrbE family protein [Dietzia cinnamea P4]
          Length = 262

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 2/200 (1%)

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
           L++   GAV+A Q    + Q GAE F+     +  +++   L+T+++IAG +GSA+ A++
Sbjct: 58  LVAIPFGAVVAMQTGSLVQQLGAEAFTGATGVLAVVQQGAPLVTSLLIAGAAGSAVAADL 117

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV-IWKYYD 291
           G+  I EE+DA+R +G+D ++ L+ PR+  +++   LL  L +   I G  +  I     
Sbjct: 118 GARTIREELDAMRVLGIDPIQRLVVPRVLGMMLVAVLLNGLVSIVGISGGYVFNIMLQGG 177

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
            P A   S F + A L +     IKA       G+VA   G         +G  V   VV
Sbjct: 178 TPGAYLMS-FGALAQLPDFIMSSIKALIFGLIAGVVASYCGMNPKGGPKGVGDAVNLGVV 236

Query: 352 QSISIVIIIDSLFAIFYFAI 371
            +  ++   + +    Y  I
Sbjct: 237 LTFLLLFFANLILTAMYLQI 256


>gi|296169578|ref|ZP_06851198.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295895844|gb|EFG75539.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 287

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 59/104 (56%), Gaps = 1/104 (0%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +V  ++   G  +A QG   L   G E  +  L + + +R    ++  + +A   G+ + 
Sbjct: 78  IVGFLTLAAGGTLAVQGYSSLGNIGIEALTGFLAAFINVRIAAPIVAGIGLAATFGAGVT 137

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTI 272
           A++G+M+INEEIDA+ +M +  +  L+S RI A ++++ PL +I
Sbjct: 138 AQLGAMRINEEIDALESMAIRPISYLVSTRIAAGMMAITPLYSI 181


>gi|145222688|ref|YP_001133366.1| hypothetical protein Mflv_2100 [Mycobacterium gilvum PYR-GCK]
 gi|315443152|ref|YP_004076031.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|145215174|gb|ABP44578.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
 gi|315261455|gb|ADT98196.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 284

 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 112/227 (49%), Gaps = 21/227 (9%)

Query: 152 FLLSLIRQMYYVGVSG---------VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDL 202
           + + L+RQ+  +G+           V +V  ++  TGA++A QG    S+ G E  +   
Sbjct: 48  YRIELVRQIAQMGLGAGALIVIGGTVAIVGFLTVTTGALVAVQGYTDFSEIGVEALTGFA 107

Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
            +   +R I    TAV +A   G+   A++G+M+INEEIDA+  MG+  V  L S R+ A
Sbjct: 108 SAFFNVRLIAPATTAVALAATIGAGATAQLGAMRINEEIDALEVMGIRSVAYLASTRVLA 167

Query: 263 -LIISLPL--LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319
            L++ +PL  + +LA+F A    + VI+      +  +F  F +   L   F   I    
Sbjct: 168 GLLVVIPLYCVGVLASFWAARFGTTVIYGQSTGVYDHYFRTFLNPTDLVWSFAQCI---V 224

Query: 320 MACAIGIVAMKEGFA-----VGVHSNSLGKKVTTCVVQSISIVIIID 361
           +A  I +V    GF+      GV   ++G+ V T ++ S  ++++I 
Sbjct: 225 LAIVIMLVHTYYGFSARGGPAGV-GEAVGRAVRTSLILSAFVLVMIS 270


>gi|225011579|ref|ZP_03702017.1| protein of unknown function DUF140 [Flavobacteria bacterium
           MS024-2A]
 gi|225004082|gb|EEG42054.1| protein of unknown function DUF140 [Flavobacteria bacterium
           MS024-2A]
          Length = 245

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 28/208 (13%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ----LREIGVLLTAVMIAGRSG 225
           +V  ISF  G V+A Q A  L      +   +L+        + E      ++++AG+ G
Sbjct: 45  IVSFISFFVGGVVAIQTALNLEN---PLLPKNLIGFAARQSIILEFAPTFISIIMAGKVG 101

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           S I + IG+M++ E+IDA+  MG++    LI P+I +L +  PL+  ++ F  I G  I 
Sbjct: 102 SYITSSIGTMRVTEQIDALEVMGINTHNYLIFPKIVSLSL-YPLVICISMFLGIFGGYI- 159

Query: 286 IWKYYDIPFAVFFSRFHSTATLA----------NIFTGLIKAPFMACAIGIVAMKEGFAV 335
                    A  +  F S+A             +I    IK  F +  +  +    G+ +
Sbjct: 160 ---------AAVYGGFSSSADYIEGIQMDFIPFHITYAFIKTSFFSFILATIPAYHGYYM 210

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              +  +GK  T   V +  ++I+++ L
Sbjct: 211 NGGALEVGKASTVSFVWTSVVIILLNYL 238


>gi|326382983|ref|ZP_08204672.1| hypothetical protein SCNU_08601 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326198119|gb|EGD55304.1| hypothetical protein SCNU_08601 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 268

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 120/239 (50%), Gaps = 11/239 (4%)

Query: 117 KIVKFINDSCSQ-AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K+ K    + +Q  +I+ L +    +     ++++ F    I+Q +++    +    LI+
Sbjct: 11  KLAKAGEGALAQTGNIVQLFVDVARQLFVRPFQWREF----IQQAWFIASVTILPTALIA 66

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              GA+++ Q    + Q GAE ++     ++ +++   L+T++++AG +GSA+ A++GS 
Sbjct: 67  IPFGAIVSLQTGSLIKQLGAESYTGAASVLVVVQQGSPLVTSLLVAGAAGSAVAADLGSR 126

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA---SIVIWKYYDI 292
            I EEIDA+  +G++ V+ L+ PR+ A+++   LL  L     I G    ++V+      
Sbjct: 127 TIREEIDAMEVLGINPVQRLVVPRVLAMVLVAVLLNGLVAVVGIGGGYFFNVVVQG--GT 184

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
           P A + + F + A L +++   +KA       G+VA  +G         +G  V   VV
Sbjct: 185 PGA-YLASFGALAQLPDLYISTLKAVIFGVIAGVVAAYKGLNPKGGPKGVGDAVNQSVV 242


>gi|108800638|ref|YP_640835.1| hypothetical protein Mmcs_3672 [Mycobacterium sp. MCS]
 gi|119869777|ref|YP_939729.1| hypothetical protein Mkms_3745 [Mycobacterium sp. KMS]
 gi|108771057|gb|ABG09779.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
 gi|119695866|gb|ABL92939.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
          Length = 285

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 96/198 (48%), Gaps = 7/198 (3%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           ++++ F+T   G  +A QG   L   G E  +  L + + +R     +  + +A   G+ 
Sbjct: 74  LVIVGFLTLAAGGTLAVQGFSSLGDIGIEALTGFLAAFINVRIAAPTVAGIGLAATFGAG 133

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + A++G+M+INEEIDA+ +M +  V  L+S RI A +I++  L  +A   + + +     
Sbjct: 134 VTAQLGAMRINEEIDALESMAIRPVEYLVSTRIAAGMIAITPLYAIAVILSFVASQFTTV 193

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG-FAVGVHSN---SLG 343
             +     ++   F +     ++    ++A  MA  I +V    G FA G  S    ++G
Sbjct: 194 MLFGQSAGLYDHYFDTFLNPIDLLWSFLQAVLMAITILLVHTYFGYFASGGPSGVGVAVG 253

Query: 344 KKVTTCVVQSISIVIIID 361
             V T ++  +S+ +++ 
Sbjct: 254 NAVRTSLILVVSVTLLVS 271


>gi|296165592|ref|ZP_06848117.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295899065|gb|EFG78546.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 318

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 88/169 (52%), Gaps = 1/169 (0%)

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
           V+ VP V L++   GA+IA Q +  +++ GA       + +  +R+   +   +++ G +
Sbjct: 107 VTAVPAV-LMAVPFGAMIAVQVSGLVNEVGANSLIGSAIGVGVVRQGAPMTAGLLMGGAA 165

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
            SAI A+ G+  I EE+DA+RT+G+D V+ L+ PR  AL++  P+L  +   S +  A  
Sbjct: 166 ASAIAADFGARAIREELDALRTLGIDPVQRLVVPRFLALVLIAPILCTIVIASGVAAAFT 225

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
           +     D+    F+  F S A + +++  + K    A  + I++   G 
Sbjct: 226 ISVTVNDVTPGSFWLSFGSFAKMVDVWFAMGKTVTFAAFVAIISSMRGM 274


>gi|296166534|ref|ZP_06848965.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295898146|gb|EFG77721.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 280

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 20/203 (9%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V   ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+ 
Sbjct: 69  VGVAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAG 128

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL--LTILANFSA------ 278
             A++G+M+++EEIDA+  M ++ V  L+S R+ A LI  +PL  L++LA F A      
Sbjct: 129 ATAQLGAMRVSEEIDAVECMAVESVSYLVSTRLIAGLIAIIPLYSLSVLAAFFAARFTTV 188

Query: 279 -IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            I G S  ++ +Y          F++    +++    ++A  M+ A+ +V    G+    
Sbjct: 189 YINGQSKGLYDHY----------FNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNASG 238

Query: 338 HSNSLGKKVTTCVVQSISIVIII 360
               +G  V   V  S+ +V++I
Sbjct: 239 GPVGVGIAVGQAVRTSLIVVVVI 261


>gi|126662313|ref|ZP_01733312.1| hypothetical protein FBBAL38_03140 [Flavobacteria bacterium BAL38]
 gi|126625692|gb|EAZ96381.1| hypothetical protein FBBAL38_03140 [Flavobacteria bacterium BAL38]
          Length = 233

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 2/114 (1%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ-LREIGVLLTAVMIAGRSGSAI 228
           +V  ISF  G V+A Q A  L+      F I   +    + E      ++++AG+ GS I
Sbjct: 33  IVSFISFFVGGVVAIQTALNLTNPLIPKFLIGFATRQSVILEFAPTFISIIMAGKMGSFI 92

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
            + IG+M++ E+IDA+  MG++ +  L+ P+I AL++  P +  L+ F  + G 
Sbjct: 93  TSSIGTMRVTEQIDALEVMGVNSLNYLVFPKIIALLL-YPFVIGLSMFLGVFGG 145


>gi|183982885|ref|YP_001851176.1| integral membrane protein, YrbE3B [Mycobacterium marinum M]
 gi|183176211|gb|ACC41321.1| conserved hypothetical integral membrane protein, YrbE3B
           [Mycobacterium marinum M]
          Length = 284

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 72/131 (54%), Gaps = 7/131 (5%)

Query: 149 FKGFLLSLIRQMYY----VGVSGVPVVIL--ISFVTGAVIAQQGAFQLSQFGAEIFSIDL 202
           ++  LL +I QM +    + V G  VVI+  ++  TGA++A QG  Q +  G E  +   
Sbjct: 48  YRSELLRVIAQMGFGAGTLAVIGGTVVIVGFLAMTTGAIVAVQGYNQFASVGVEALTGFA 107

Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
            +    REI      V +A   G+   A++G+M+INEEIDA+  +G+  V  L S R+ A
Sbjct: 108 SAFFNTREIQPGTVMVALAATVGAGATAQLGAMRINEEIDALEVIGIRSVSYLASTRVLA 167

Query: 263 -LIISLPLLTI 272
            +++++PL  +
Sbjct: 168 GVVVAIPLFCV 178


>gi|240170398|ref|ZP_04749057.1| hypothetical protein MkanA1_13890 [Mycobacterium kansasii ATCC
           12478]
          Length = 281

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 59/104 (56%), Gaps = 1/104 (0%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +V  ++   G  +A QG   L   G E  +  L + + +R    ++  + +A   G+ + 
Sbjct: 72  IVGFLTLAAGGTLAVQGYSSLGNIGIEALTGFLAAFINVRISAPVVAGIGLAATFGAGVT 131

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTI 272
           A++G+M+INEEIDA+ +M +  +  L+S RI A ++++ PL +I
Sbjct: 132 AQLGAMRINEEIDALESMAIRPISYLVSTRIVAGMLAITPLYSI 175


>gi|260061863|ref|YP_003194943.1| hypothetical protein RB2501_09685 [Robiginitalea biformata
           HTCC2501]
 gi|88785996|gb|EAR17165.1| hypothetical protein RB2501_09685 [Robiginitalea biformata
           HTCC2501]
          Length = 245

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 21/162 (12%)

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
           E     T++++AG+ GS I + IG+M++ E+IDA+  MG++ +  L+ P+I A+++  P 
Sbjct: 86  EFAPTFTSIIMAGKVGSYITSSIGTMRVTEQIDALEVMGVNALNYLVFPKIIAMLL-YPF 144

Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA----------NIFTGLIKAPF 319
           +  +A +  I+G  I          A  F  F S+A             ++    IK+  
Sbjct: 145 VVAIAMYVGILGGWI----------AGVFGGFSSSADFIEGLQLDFIPFHVMYSFIKSVV 194

Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            A  I  V    GF +   +  +GK  T   V +  ++I+++
Sbjct: 195 FAFIIATVPSYHGFYMKGGALEVGKASTVSFVWTSVVIIVMN 236


>gi|240170055|ref|ZP_04748714.1| hypothetical integral membrane protein [Mycobacterium kansasii ATCC
           12478]
          Length = 280

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 20/203 (9%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V   ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+ 
Sbjct: 69  VGVAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAG 128

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL--LTILANFSA------ 278
             A++G+M+++EEIDA+  M +  V  L+S R+ A L+  +PL  L++LA F A      
Sbjct: 129 ATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARFTTV 188

Query: 279 -IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            I G S  ++ +Y          F++    +++    ++A  M+ A+ +V    G+    
Sbjct: 189 FINGQSKGLYDHY----------FNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNASG 238

Query: 338 HSNSLGKKVTTCVVQSISIVIII 360
            S  +G  V   V  S+ +V++I
Sbjct: 239 GSVGVGIAVGQAVRTSLIVVVVI 261


>gi|118470997|ref|YP_890127.1| TrnB2 protein [Mycobacterium smegmatis str. MC2 155]
 gi|118172284|gb|ABK73180.1| TrnB2 protein [Mycobacterium smegmatis str. MC2 155]
          Length = 287

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 26/209 (12%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V   ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+ 
Sbjct: 76  VGVAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAGIALAATIGAG 135

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PL--LTILANFSA------ 278
             A++G+M++ EEIDA+ +M +  V  L+S R+ A +I++ PL  L++LA F A      
Sbjct: 136 ATAQLGAMRVAEEIDAVESMAVHAVSYLVSTRLLAGLIAIVPLYSLSVLAAFFAARFTTV 195

Query: 279 -IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF---- 333
            I G S  ++ +Y          F++    +++    ++A  MA A+ +V    G+    
Sbjct: 196 FINGQSAGLYDHY----------FNTFLIPSDLLWSFLQAIVMAIAVMLVHTYYGYNASG 245

Query: 334 -AVGVHSNSLGKKVTTCVVQSISIVIIID 361
             VGV   ++G+ V T ++  ++I + I 
Sbjct: 246 GPVGV-GIAVGQAVRTSLIVVVTITLFIS 273


>gi|120402601|ref|YP_952430.1| hypothetical protein Mvan_1595 [Mycobacterium vanbaalenii PYR-1]
 gi|119955419|gb|ABM12424.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 280

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 3/110 (2%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V + ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+   
Sbjct: 71  VTVFLTLASGGVIAVQGYASLGDIGIEALTGFLSAFLNVRIVAPVIAGIALAATIGAGST 130

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL--LTILANF 276
           A++G+M+I EEIDA+  M +  +  L++ R+ A +I+ +PL  L IL +F
Sbjct: 131 AQLGAMRIAEEIDALEVMAVRSMAYLVATRMIAGVIVIVPLYSLAILTSF 180


>gi|271964524|ref|YP_003338720.1| resistance to organic solvents ABC transporter permease
           [Streptosporangium roseum DSM 43021]
 gi|270507699|gb|ACZ85977.1| ABC-type transport system involved in resistance to organic
           solvents permease component-like protein
           [Streptosporangium roseum DSM 43021]
          Length = 269

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 65/117 (55%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
           ++  + +    I+Q +++       V+L+S   GA +A Q      Q GA   +   + +
Sbjct: 38  TWDVRTWFWEYIQQCWFLARVTSLPVLLVSLPLGATVALQVGQLAWQLGASSATGGAVVV 97

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
             +RE+  + +A++IAG  GSA+ ++IG+  I +E+ A+  M ++ +  L++PR+WA
Sbjct: 98  GLVREVAPMASALLIAGAGGSAMTSDIGARNIRDELAAMEVMAVNPIHRLVTPRLWA 154


>gi|183980442|ref|YP_001848733.1| integral membrane protein YrbE1B [Mycobacterium marinum M]
 gi|183173768|gb|ACC38878.1| conserved hypothetical integral membrane protein YrbE1B
           [Mycobacterium marinum M]
          Length = 289

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 96/181 (53%), Gaps = 13/181 (7%)

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
           R+ F  +  N + + G  + + +++S   A     ++++ G+   +   ++  +L LI Q
Sbjct: 8   RARFPRAIANFNRYAGS-VTRGLDESGRLAW---FILTSLGQSGHALRYYRKEILRLIAQ 63

Query: 160 MYYVGVSGVPVV----ILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           +  +G   + VV     ++ FVT    ++IA QG   L   G E F+    +++ +R  G
Sbjct: 64  IG-MGTGAMAVVGGTAAIVGFVTLSGSSLIAIQGFASLGNIGVEAFTGFFSALVNVRIAG 122

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPLLT 271
            ++T V +A   G+   AE+G+M+I+EEIDA+  MG+  +  L S RI A L++ +PL  
Sbjct: 123 PVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISYLASTRIMAGLVVIIPLYA 182

Query: 272 I 272
           +
Sbjct: 183 L 183


>gi|118616794|ref|YP_905126.1| integral membrane protein YrbE1B [Mycobacterium ulcerans Agy99]
 gi|118568904|gb|ABL03655.1| conserved hypothetical integral membrane protein YrbE1B
           [Mycobacterium ulcerans Agy99]
          Length = 289

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 96/181 (53%), Gaps = 13/181 (7%)

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
           R+ F  +  N + + G  + + +++S   A     ++++ G+   +   ++  +L LI Q
Sbjct: 8   RARFPRAIANFNRYAGS-VTRGLDESGRLAW---FILTSLGQSGHALRYYRKEILRLIAQ 63

Query: 160 MYYVGVSGVPVV----ILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           +  +G   + VV     ++ FVT    ++IA QG   L   G E F+    +++ +R  G
Sbjct: 64  IG-MGTGAMAVVGGTAAIVGFVTLSGSSLIAIQGFASLGNIGVEAFTGFFSALVNVRIAG 122

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPLLT 271
            ++T V +A   G+   AE+G+M+I+EEIDA+  MG+  +  L S RI A L++ +PL  
Sbjct: 123 PVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIQSISYLASTRIMAGLVVIIPLYA 182

Query: 272 I 272
           +
Sbjct: 183 L 183


>gi|254822746|ref|ZP_05227747.1| ABC-transporter integral membrane protein [Mycobacterium
           intracellulare ATCC 13950]
          Length = 280

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 99/203 (48%), Gaps = 20/203 (9%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V   ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+ 
Sbjct: 69  VGVAAFLTLASGGVIAVQGYSSLGHIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAG 128

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL--LTILANFSA------ 278
             A++G+M+++EEIDA+  M +  V  L+S R+ A LI  +PL  L++LA F A      
Sbjct: 129 ATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLIAIIPLYSLSVLAAFFAARFTTV 188

Query: 279 -IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            I G S  ++ +Y          F++    +++    ++A  M+ A+ +V    G+    
Sbjct: 189 YINGQSKGLYDHY----------FNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNASG 238

Query: 338 HSNSLGKKVTTCVVQSISIVIII 360
               +G  V   V  S+ +V++I
Sbjct: 239 GPVGVGIAVGQAVRTSLIVVVVI 261


>gi|119867718|ref|YP_937670.1| hypothetical protein Mkms_1677 [Mycobacterium sp. KMS]
 gi|120401521|ref|YP_951350.1| hypothetical protein Mvan_0499 [Mycobacterium vanbaalenii PYR-1]
 gi|126434219|ref|YP_001069910.1| hypothetical protein Mjls_1626 [Mycobacterium sp. JLS]
 gi|145221252|ref|YP_001131930.1| hypothetical protein Mflv_0653 [Mycobacterium gilvum PYR-GCK]
 gi|315441853|ref|YP_004074732.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|49072909|gb|AAT51760.1| TrnB2 [Mycobacterium vanbaalenii PYR-1]
 gi|119693807|gb|ABL90880.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
 gi|119954339|gb|ABM11344.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
 gi|126234019|gb|ABN97419.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
 gi|145213738|gb|ABP43142.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
 gi|315260156|gb|ADT96897.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 285

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 98/200 (49%), Gaps = 29/200 (14%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---------VPVVIL 173
            D   QA   G  IS+T +  A++Y+ +     ++RQ+  +G+           V VV  
Sbjct: 26  RDLGDQARFYGQSISSTVQ-AATTYRAE-----VLRQIAAIGLGAGSLAVVGGTVAVVAF 79

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           ++  T A +A Q   Q+SQ G E  +    + + +R      +A   A   G+   A++G
Sbjct: 80  LNLSTSAALASQAYNQMSQVGVEALAGFTSAYVNVRLATPASSAFAFAATIGAGTTAQLG 139

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL--LTILANF-------SAIIG-A 282
           +MKINEEIDA+  MG+  +  L S R+ A +I+ +PL  + +L +F       +A  G  
Sbjct: 140 AMKINEEIDALAVMGIRPIAYLASTRLLAGVIVVVPLYCVALLMSFFSVRVITTAFYGQG 199

Query: 283 SIVIWKYYDI---PFAVFFS 299
           S V   Y+D    P AVFFS
Sbjct: 200 SGVFDHYFDTFLNPQAVFFS 219


>gi|145222147|ref|YP_001132825.1| hypothetical protein Mflv_1555 [Mycobacterium gilvum PYR-GCK]
 gi|315442586|ref|YP_004075465.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|145214633|gb|ABP44037.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
 gi|315260889|gb|ADT97630.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 280

 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 106/209 (50%), Gaps = 26/209 (12%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V   ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+ 
Sbjct: 69  VGVAAFMTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAGIALAATIGAG 128

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PL--LTILANFSA------ 278
             A++G+M++ EEIDA+  M +  V  L+S R+ A +I++ PL  L++LA F A      
Sbjct: 129 ATAQLGAMRVAEEIDAVEAMAVHAVSYLVSTRLIAGLIAIVPLYALSVLAAFFAARFTTV 188

Query: 279 -IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF---- 333
            I G S  ++ +Y          F++    +++    ++A  M+ A+ +V    G+    
Sbjct: 189 YINGQSAGLYDHY----------FNTFLVPSDLLWSFLQAIVMSIAVMLVHTYYGYNASG 238

Query: 334 -AVGVHSNSLGKKVTTCVVQSISIVIIID 361
             VGV   ++G+ V T ++  ++IV++I 
Sbjct: 239 GPVGV-GIAVGQAVRTSLIVVVTIVLMIS 266


>gi|331699195|ref|YP_004335434.1| hypothetical protein Psed_5448 [Pseudonocardia dioxanivorans
           CB1190]
 gi|326953884|gb|AEA27581.1| protein of unknown function DUF140 [Pseudonocardia dioxanivorans
           CB1190]
          Length = 280

 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 76/142 (53%), Gaps = 13/142 (9%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVIL--------ISFVTGAVIAQQGAFQLSQFGAEIFS 199
           +++G +  L+ ++ +   SG  +VIL        +S   G+++  QG   L   G E  +
Sbjct: 43  RYRGEIARLLAEVSFG--SGALIVILGTAGVMAALSLFVGSLVGLQGFRALDSLGVEALT 100

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
             + +    R+I  L+ A  +    G+   A++G+M+I+EE+DA+  M +  V  L++ R
Sbjct: 101 GFITAYFNTRDIAPLVAASALTATLGAGFTAQLGAMRISEEVDALEVMAVPSVPFLVTTR 160

Query: 260 IWALIIS-LPLLTI--LANFSA 278
           + A +I+ +P+ TI  LA+F A
Sbjct: 161 VIAGMIAVIPMYTIGLLASFVA 182


>gi|169631233|ref|YP_001704882.1| hypothetical protein MAB_4155c [Mycobacterium abscessus ATCC 19977]
 gi|169243200|emb|CAM64228.1| Conserved hypothetical protein [Mycobacterium abscessus]
          Length = 255

 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 8/194 (4%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P  +L++F    ++ + GA  LS   A  F         + ++G ++T +++AG   +A
Sbjct: 56  IPFTVLVAFTLNILLREIGAADLSG-AATAFG-------TVTQLGPVVTVLVVAGAGATA 107

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+  I EEIDA++ +G+D ++ L+ PR+ A      LL  L     ++G  +   
Sbjct: 108 ICADLGARTIREEIDAMQVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGMVGGYVFSV 167

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
               +    F +       L  +    +KA       G+V    G  V      +G  V 
Sbjct: 168 FLQGVNPGAFINGLTVLTGLGELMISEVKAFLFGIFAGLVGCYRGLTVKGGPKGVGDAVN 227

Query: 348 TCVVQSISIVIIID 361
             VV +   + +I+
Sbjct: 228 ETVVYAFICLFVIN 241


>gi|134098921|ref|YP_001104582.1| putative ABC transport system permease protein [Saccharopolyspora
           erythraea NRRL 2338]
 gi|291009385|ref|ZP_06567358.1| putative ABC transport system permease protein [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133911544|emb|CAM01657.1| putative ABC transport system permease protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 279

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 10/181 (5%)

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG  +  QG   L+Q G    +  + +    REI  L+  + ++   G+   A++G+M+I
Sbjct: 78  TGVTVGLQGFSALNQIGISTLTGFMTAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRI 137

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTILANFSAIIGASIVIWKY------Y 290
           +EEIDA+  M +  +  L++ RI A  ++ +PL  I    S +    + +W +      Y
Sbjct: 138 SEEIDALEVMAVRSLPYLVTTRIVAGFVAVVPLYVIGLLTSYVASRQVTVWFFGQSGGTY 197

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
           D  F++F        +   +    +      C  G  A      VGV   ++G+ V T +
Sbjct: 198 DHYFSLFLPPVDVLWSFGKVLVFSVAVILTHCFYGYRAAGGPAGVGV---AVGRAVRTSI 254

Query: 351 V 351
           V
Sbjct: 255 V 255


>gi|120406151|ref|YP_955980.1| hypothetical protein Mvan_5203 [Mycobacterium vanbaalenii PYR-1]
 gi|119958969|gb|ABM15974.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 280

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 106/209 (50%), Gaps = 26/209 (12%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V   ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+ 
Sbjct: 69  VGVAAFMTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAGIALAATIGAG 128

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PL--LTILANFSA------ 278
             A++G+M++ EEIDA+ +M +  V  L+S R+ A +I++ PL  L++LA F A      
Sbjct: 129 ATAQLGAMRVAEEIDAVESMAVHAVSYLVSTRLIAGLIAIVPLYALSVLAAFFAARFTTV 188

Query: 279 -IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF---- 333
            I G S  ++ +Y          F++    +++    ++A  M+ A+ +V    G+    
Sbjct: 189 YINGQSAGLYDHY----------FNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNASG 238

Query: 334 -AVGVHSNSLGKKVTTCVVQSISIVIIID 361
             VGV   ++G+ V T ++  ++IV+ I 
Sbjct: 239 GPVGV-GIAVGQAVRTSLIVVVTIVLFIS 266


>gi|3123858|gb|AAC15953.1| hypothetical integral membrane protein [Campylobacter jejuni]
          Length = 133

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%)

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           +I+G  +V     DI F  F  RF     + +I  GL KAP     IG++A   GF V  
Sbjct: 5   SILGGMVVAKINLDISFGEFLRRFREAVEMKHIIIGLAKAPIFGFLIGLIACFRGFEVKN 64

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
            + S+G   T  VV +I  VI  D+LF++
Sbjct: 65  TTQSIGIYTTKSVVNAIFWVIAFDALFSV 93


>gi|41406661|ref|NP_959497.1| hypothetical protein MAP0563 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41395010|gb|AAS02880.1| hypothetical protein MAP_0563 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 280

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 104/208 (50%), Gaps = 23/208 (11%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V   ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+ 
Sbjct: 69  VGVAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAG 128

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PL--LTILANFSA------ 278
             A++G+M+++EEIDA+  M +  V  L+S R+ A +I++ PL  L++LA F A      
Sbjct: 129 ATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLIAIVPLYSLSVLAAFFAARFTTV 188

Query: 279 -IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            I G S  ++ +Y          F++    +++    ++A  M+ A+ +V    G+    
Sbjct: 189 YINGQSKGLYDHY----------FNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGY--NA 236

Query: 338 HSNSLGKKVTTC-VVQSISIVIIIDSLF 364
           H   +G  +     V++  IV+++ +LF
Sbjct: 237 HGGPVGVGIAVGQAVRTSLIVVVVITLF 264


>gi|118463834|ref|YP_879936.1| ABC transporter transmembrane protein [Mycobacterium avium 104]
 gi|254773612|ref|ZP_05215128.1| ABC-transporter integral membrane protein [Mycobacterium avium
           subsp. avium ATCC 25291]
 gi|118165121|gb|ABK66018.1| ABC-transporter integral membrane protein [Mycobacterium avium 104]
          Length = 280

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 104/208 (50%), Gaps = 23/208 (11%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V   ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+ 
Sbjct: 69  VGVAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAG 128

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PL--LTILANFSA------ 278
             A++G+M+++EEIDA+  M +  V  L+S R+ A +I++ PL  L++LA F A      
Sbjct: 129 ATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLIAIVPLYSLSVLAAFFAARFTTV 188

Query: 279 -IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            I G S  ++ +Y          F++    +++    ++A  M+ A+ +V    G+    
Sbjct: 189 YINGQSKGLYDHY----------FNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGY--NA 236

Query: 338 HSNSLGKKVTTC-VVQSISIVIIIDSLF 364
           H   +G  +     V++  IV+++ +LF
Sbjct: 237 HGGPVGVGIAVGQAVRTSLIVVVVITLF 264


>gi|30468225|ref|NP_849112.1| ORF251 [Cyanidioschyzon merolae strain 10D]
 gi|30409325|dbj|BAC76274.1| ycxr [Cyanidioschyzon merolae strain 10D]
          Length = 251

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/207 (22%), Positives = 95/207 (45%)

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           Q+ ++    + +  + S   G V+  Q A +L    A      ++ +  LRE+  + TA+
Sbjct: 33  QIAWIAEQSLSLCWIHSCFLGMVLCLQLAKELISLQATPMIGAILGLTLLRELSPVFTAI 92

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++  R  S+  +E+ SM ++E+ DA+  +     ++ I PR  A +I LPL T     ++
Sbjct: 93  LLTARVASSYTSELASMCVSEQFDALYLLQTHPFQLHIIPRYLACLIMLPLCTWFCFLTS 152

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           +  +  +    Y IP  +F +   S+ +L +I T L+KA      + +++          
Sbjct: 153 LSASLFLACLAYGIPVNLFLTSLRSSLSLWDILTSLLKAMIFGALLALISCHYALITRGG 212

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFA 365
           S  +    T  VV  + +++  D L +
Sbjct: 213 SKQIAISTTRAVVHVLVLILAFDWLLS 239


>gi|326382582|ref|ZP_08204273.1| hypothetical protein SCNU_06570 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326198701|gb|EGD55884.1| hypothetical protein SCNU_06570 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 282

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 58/103 (56%), Gaps = 3/103 (2%)

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA +  +G   L+  G    +  L +    REI  LL A     +SG    A++GSM+I+
Sbjct: 82  GATVGIEGYTALNLLGMSPITGGLSAFATTREIAPLLAATAFTAQSGCRFTAQLGSMRIS 141

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIIS-LPL--LTILANFSA 278
           EEIDA+ ++ +  +  L++ R+ A ++S +PL  +++ AN+ A
Sbjct: 142 EEIDALESIAIRPLPYLVTTRMAAAVLSIIPLYAISLAANYVA 184


>gi|226364102|ref|YP_002781884.1| YrbE family protein [Rhodococcus opacus B4]
 gi|226242591|dbj|BAH52939.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 289

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/202 (23%), Positives = 97/202 (48%), Gaps = 4/202 (1%)

Query: 171 VILISFVTGAV---IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +++IS +T AV   + QQGA  + + G    S  + +    RE   ++  + +    G+ 
Sbjct: 78  LVVISLLTTAVGYEVGQQGATSMGRIGIGALSGFISAFFNTREAIPVIAGIALTATVGAG 137

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
             A++G+M+++EEIDA+ TM +  +  L++ R+ A II++  L  +A F   + A+ ++ 
Sbjct: 138 FTAQLGAMRVSEEIDAMETMSIPSLPYLVTTRVTAGIIAVIPLYAVALFVGYV-ATQLVT 196

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +Y       +   F+     +++   ++K   M+  +  V    G+        +G  V 
Sbjct: 197 EYLGEASGTYQHYFNVFLVPSDVAWSMVKVLAMSVVVMCVHCYHGYNAKGGPAGVGVAVG 256

Query: 348 TCVVQSISIVIIIDSLFAIFYF 369
             V  S+  +++ID L  I  +
Sbjct: 257 RAVRTSLIAIMVIDLLVGIAVY 278


>gi|326336634|ref|ZP_08202802.1| ABC superfamily ATP binding cassette transporter permease protein
           [Capnocytophaga sp. oral taxon 338 str. F0234]
 gi|325691104|gb|EGD33075.1| ABC superfamily ATP binding cassette transporter permease protein
           [Capnocytophaga sp. oral taxon 338 str. F0234]
          Length = 273

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 7/104 (6%)

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR----EIGVLLTAVMIA 221
           S + ++  IS   GAVIA Q A  +      +    L+     +    E     T++++A
Sbjct: 69  SSLGIIAFISLFVGAVIAIQMALNIDN---PLIPKSLIGFATRQTIVLEFAPTFTSIIVA 125

Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
           G+ GS I + IG+M++ E+IDA+  MG++ +  LI P+I AL++
Sbjct: 126 GKVGSFITSSIGTMRVTEQIDALDIMGVNSLNYLIFPKIIALLL 169


>gi|110348077|gb|ABG72766.1| YrbE1B-HA [Expression vector yrbE1AB]
          Length = 300

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 61/103 (59%), Gaps = 4/103 (3%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V ++ FVT    +++A QG   L   G E F+    +++ +R  G ++T V +A   G+ 
Sbjct: 78  VAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVTGVALAATVGAG 137

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL 269
             AE+G+M+I+EEIDA+  MG+  +  L S RI A L++ +PL
Sbjct: 138 ATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180


>gi|260203313|ref|ZP_05770804.1| hypothetical protein MtubK8_03240 [Mycobacterium tuberculosis K85]
          Length = 298

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 92/178 (51%), Gaps = 13/178 (7%)

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
           R+ F  +  NL  + G    + ++++     +    +++ G+   +   ++   L LI Q
Sbjct: 17  RARFPRAVANLRQY-GGAAARGLDEA---GQLTWFALTSIGQIAHALRYYRKETLRLIAQ 72

Query: 160 MYYVGVSGVPVV----ILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           +  +G   + VV     ++ FVT    +++A QG   L   G E F+    +++ +R  G
Sbjct: 73  IG-MGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAG 131

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL 269
            ++T V +A   G+   AE+G+M+I+EEIDA+  MG+  +  L S RI A L++ +PL
Sbjct: 132 PVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 189


>gi|167970289|ref|ZP_02552566.1| hypothetical integral membrane protein yrbE1B [Mycobacterium
           tuberculosis H37Ra]
 gi|215406161|ref|ZP_03418342.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis
           02_1987]
 gi|215425375|ref|ZP_03423294.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis T92]
 gi|215433088|ref|ZP_03431007.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis
           EAS054]
 gi|215448447|ref|ZP_03435199.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis T85]
 gi|218755902|ref|ZP_03534698.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis GM
           1503]
 gi|219555966|ref|ZP_03535042.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis T17]
 gi|254549107|ref|ZP_05139554.1| hypothetical protein Mtube_01356 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260185031|ref|ZP_05762505.1| hypothetical protein MtubCP_03117 [Mycobacterium tuberculosis
           CPHL_A]
 gi|260199171|ref|ZP_05766662.1| hypothetical protein MtubT4_03255 [Mycobacterium tuberculosis T46]
 gi|294994642|ref|ZP_06800333.1| hypothetical protein Mtub2_09022 [Mycobacterium tuberculosis 210]
 gi|297632646|ref|ZP_06950426.1| hypothetical protein MtubK4_00906 [Mycobacterium tuberculosis KZN
           4207]
 gi|297729621|ref|ZP_06958739.1| hypothetical protein MtubKR_00936 [Mycobacterium tuberculosis KZN
           R506]
 gi|313656947|ref|ZP_07813827.1| hypothetical protein MtubKV_00921 [Mycobacterium tuberculosis KZN
           V2475]
          Length = 298

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 92/178 (51%), Gaps = 13/178 (7%)

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
           R+ F  +  NL  + G    + ++++     +    +++ G+   +   ++   L LI Q
Sbjct: 17  RARFPRAVANLRQY-GGAAARGLDEA---GQLTWFALTSIGQIAHALRYYRKETLRLIAQ 72

Query: 160 MYYVGVSGVPVV----ILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           +  +G   + VV     ++ FVT    +++A QG   L   G E F+    +++ +R  G
Sbjct: 73  IG-MGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAG 131

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL 269
            ++T V +A   G+   AE+G+M+I+EEIDA+  MG+  +  L S RI A L++ +PL
Sbjct: 132 PVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 189


>gi|120405065|ref|YP_954894.1| hypothetical protein Mvan_4111 [Mycobacterium vanbaalenii PYR-1]
 gi|119957883|gb|ABM14888.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 281

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 71/140 (50%), Gaps = 13/140 (9%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +V  ++  TG  +A QG   L   G E  +  L + + +R    ++  + +A   G+ + 
Sbjct: 72  IVGFLTLATGGTLAVQGYSSLGDIGIEALTGFLAAFINVRISAPVVAGIGLAATFGAGVT 131

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTILANFS---------AI 279
           A++G+M+ NEEIDA+  M +  +  L+S R+ A ++++ PL ++    S          +
Sbjct: 132 AQLGAMRTNEEIDALEAMAIRPISFLVSTRLIAGMVAITPLYSVAVILSFLASRYTTVVL 191

Query: 280 IGASIVIWKYYDIPFAVFFS 299
           +G S  ++ +Y   FA F S
Sbjct: 192 LGQSAGLYDHY---FATFLS 208


>gi|296165591|ref|ZP_06848116.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295899064|gb|EFG78545.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 230

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 89/194 (45%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           + ++ ++    GA++A +    L+  G    S  +     +RE+  L+T V  A ++G  
Sbjct: 19  ISILTILGVTIGAMVAIEAYATLNLIGLGALSGIIGGWGNIREMAPLVTGVAFASQAGCR 78

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + AEIGSM+I +EIDA  +MGL  +  ++  R+   +I +    +L    A   + +VI 
Sbjct: 79  MTAEIGSMRIADEIDATESMGLRSIPFVVGTRLVGGMICVVPGFLLELMVAFFTSDLVIR 138

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
             Y+ P   +   F    +  +I   LIKA     A  ++    G+        +G+   
Sbjct: 139 VSYNQPAGTYNHYFVQFLSPTDIGYSLIKAIIYCAAATLIHCYYGYFASGGPVGVGQASG 198

Query: 348 TCVVQSISIVIIID 361
             +  S+  ++++D
Sbjct: 199 RAIRASLVTIMVLD 212


>gi|15607309|ref|NP_214682.1| integral membrane protein YRBE1B [Mycobacterium tuberculosis H37Rv]
 gi|31791346|ref|NP_853839.1| integral membrane protein YRBE1B [Mycobacterium bovis AF2122/97]
 gi|121636080|ref|YP_976303.1| integral membrane protein YrbE1b [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148659932|ref|YP_001281455.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis H37Ra]
 gi|148821360|ref|YP_001286114.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis F11]
 gi|224988553|ref|YP_002643240.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253797090|ref|YP_003030091.1| hypothetical protein TBMG_00169 [Mycobacterium tuberculosis KZN
           1435]
 gi|254233557|ref|ZP_04926883.1| hypothetical integral membrane protein yrbE1B [Mycobacterium
           tuberculosis C]
 gi|254366620|ref|ZP_04982664.1| hypothetical integral membrane protein yrbE1B [Mycobacterium
           tuberculosis str. Haarlem]
 gi|289441543|ref|ZP_06431287.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           T46]
 gi|289445699|ref|ZP_06435443.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           CPHL_A]
 gi|289552420|ref|ZP_06441630.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           KZN 605]
 gi|289568067|ref|ZP_06448294.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           T17]
 gi|289747935|ref|ZP_06507313.1| hypothetical integral membrane protein yrbE1B [Mycobacterium
           tuberculosis 02_1987]
 gi|289748644|ref|ZP_06508022.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           T92]
 gi|289756233|ref|ZP_06515611.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
 gi|289760270|ref|ZP_06519648.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|289764284|ref|ZP_06523662.1| hypothetical integral membrane protein yrbE1B [Mycobacterium
           tuberculosis GM 1503]
 gi|306774258|ref|ZP_07412595.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu001]
 gi|306782790|ref|ZP_07421112.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu003]
 gi|306801753|ref|ZP_07438421.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu008]
 gi|307082301|ref|ZP_07491471.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu011]
 gi|308369322|ref|ZP_07417339.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu002]
 gi|308371608|ref|ZP_07425479.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu004]
 gi|308372825|ref|ZP_07430015.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu005]
 gi|308373908|ref|ZP_07434059.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu006]
 gi|308375089|ref|ZP_07442632.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu007]
 gi|308378565|ref|ZP_07483021.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu009]
 gi|308379713|ref|ZP_07487253.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu010]
 gi|308394823|ref|ZP_07491759.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu012]
 gi|2213505|emb|CAB09751.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE1B
           [Mycobacterium tuberculosis H37Rv]
 gi|31616931|emb|CAD93038.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE1B
           [Mycobacterium bovis AF2122/97]
 gi|121491727|emb|CAL70189.1| Conserved hypothetical integral membrane protein yrbE1B
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124603350|gb|EAY61625.1| hypothetical integral membrane protein yrbE1B [Mycobacterium
           tuberculosis C]
 gi|134152132|gb|EBA44177.1| hypothetical integral membrane protein yrbE1B [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148504084|gb|ABQ71893.1| conserved hypothetical integral membrane protein YrbE1b
           [Mycobacterium tuberculosis H37Ra]
 gi|148719887|gb|ABR04512.1| hypothetical integral membrane protein yrbE1B [Mycobacterium
           tuberculosis F11]
 gi|224771666|dbj|BAH24472.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253318593|gb|ACT23196.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           KZN 1435]
 gi|289414462|gb|EFD11702.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           T46]
 gi|289418657|gb|EFD15858.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           CPHL_A]
 gi|289437052|gb|EFD19545.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           KZN 605]
 gi|289541820|gb|EFD45469.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           T17]
 gi|289688463|gb|EFD55951.1| hypothetical integral membrane protein yrbE1B [Mycobacterium
           tuberculosis 02_1987]
 gi|289689231|gb|EFD56660.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           T92]
 gi|289696820|gb|EFD64249.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
 gi|289711790|gb|EFD75806.1| hypothetical integral membrane protein yrbE1B [Mycobacterium
           tuberculosis GM 1503]
 gi|289715834|gb|EFD79846.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|308217092|gb|EFO76491.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu001]
 gi|308328030|gb|EFP16881.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu002]
 gi|308332310|gb|EFP21161.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu003]
 gi|308336192|gb|EFP25043.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu004]
 gi|308339692|gb|EFP28543.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu005]
 gi|308343699|gb|EFP32550.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu006]
 gi|308347572|gb|EFP36423.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu007]
 gi|308351471|gb|EFP40322.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu008]
 gi|308352198|gb|EFP41049.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu009]
 gi|308356147|gb|EFP44998.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu010]
 gi|308360102|gb|EFP48953.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu011]
 gi|308367650|gb|EFP56501.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu012]
 gi|323717157|gb|EGB26366.1| hypothetical protein TMMG_00597 [Mycobacterium tuberculosis
           CDC1551A]
 gi|326905925|gb|EGE52858.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           W-148]
 gi|328456877|gb|AEB02300.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           KZN 4207]
 gi|328864230|gb|AEB53198.1| conserved integral membrane protein YRBE1B [Mycobacterium
           tuberculosis]
          Length = 289

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 61/103 (59%), Gaps = 4/103 (3%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V ++ FVT    +++A QG   L   G E F+    +++ +R  G ++T V +A   G+ 
Sbjct: 78  VAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVTGVALAATVGAG 137

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL 269
             AE+G+M+I+EEIDA+  MG+  +  L S RI A L++ +PL
Sbjct: 138 ATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180


>gi|298527560|ref|ZP_07014969.1| YrbE1B-HA [Mycobacterium tuberculosis 94_M4241A]
 gi|298497354|gb|EFI32648.1| YrbE1B-HA [Mycobacterium tuberculosis 94_M4241A]
          Length = 289

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 61/103 (59%), Gaps = 4/103 (3%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V ++ FVT    +++A QG   L   G E F+    +++ +R  G ++T V +A   G+ 
Sbjct: 78  VAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVTGVALAATVGAG 137

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL 269
             AE+G+M+I+EEIDA+  MG+  +  L S RI A L++ +PL
Sbjct: 138 ATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180


>gi|289572748|ref|ZP_06452975.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis K85]
 gi|289537179|gb|EFD41757.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis K85]
          Length = 289

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 61/103 (59%), Gaps = 4/103 (3%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V ++ FVT    +++A QG   L   G E F+    +++ +R  G ++T V +A   G+ 
Sbjct: 78  VAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVTGVALAATVGAG 137

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL 269
             AE+G+M+I+EEIDA+  MG+  +  L S RI A L++ +PL
Sbjct: 138 ATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180


>gi|215414033|ref|ZP_03422692.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis
           94_M4241A]
          Length = 298

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 61/103 (59%), Gaps = 4/103 (3%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V ++ FVT    +++A QG   L   G E F+    +++ +R  G ++T V +A   G+ 
Sbjct: 87  VAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVTGVALAATVGAG 146

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL 269
             AE+G+M+I+EEIDA+  MG+  +  L S RI A L++ +PL
Sbjct: 147 ATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 189


>gi|226349636|ref|YP_002776750.1| putative YrbE family protein [Rhodococcus opacus B4]
 gi|226245551|dbj|BAH55898.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 304

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 60/106 (56%), Gaps = 4/106 (3%)

Query: 171 VILISFVTGAV---IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +++IS +T AV   + QQGA  L + G    S  + +    RE    +  + +    G+ 
Sbjct: 92  LMVISLLTAAVGYEVGQQGATSLGRVGIGALSGFISAFFNTREAIPAIAGIALTATVGAG 151

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTI 272
             A++G+M+++EEIDA+ TM +  +  L++ R+ A +I+ +PL ++
Sbjct: 152 FTAQLGAMRVSEEIDAMETMSIPSLPYLVTTRVMAGVIAVIPLYSV 197


>gi|118467231|ref|YP_881722.1| TrnB1 protein [Mycobacterium avium 104]
 gi|118168518|gb|ABK69415.1| TrnB1 protein [Mycobacterium avium 104]
          Length = 261

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 74/151 (49%)

Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
           IG + T +++AG   +AI A++G+  I EE+DA+R MG++ V+ L+ PR+ AL ++  LL
Sbjct: 99  IGPITTVLVVAGTGATAICADLGARTIREELDAMRVMGINPVQRLLVPRVLALCLNGLLL 158

Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330
             +     ++G+      +  +    + +       +A++     KA       G +A  
Sbjct: 159 NSINTIVGLVGSFFFSVYFQHVTPGAWAASLTLLVKIADVAIAFFKAALFGLVAGTIACY 218

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           +G  VG     +G  V   VV +   + +I+
Sbjct: 219 KGVTVGGGPQGVGNAVNETVVYTFMALFVIN 249


>gi|89891419|ref|ZP_01202925.1| putative ABC transporter [Flavobacteria bacterium BBFL7]
 gi|89516450|gb|EAS19111.1| putative ABC transporter [Flavobacteria bacterium BBFL7]
          Length = 246

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 8/113 (7%)

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ----LREIGVLLTAVMIAGRSGSAIV 229
           IS   GAV+A Q A  L      +    L+        + E      +V++AG+ GS I 
Sbjct: 49  ISLFMGAVVALQTALNLDN---PLIPKSLIGFATRQSIILEFAPTFISVIMAGKVGSYIT 105

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           + IG+M++ E+IDA+  MG++ +  LI P+I AL+   P L  +  F  I G 
Sbjct: 106 SSIGTMRVTEQIDALEVMGINPLNYLIYPKIIALLFY-PFLIAIIMFVGIFGG 157


>gi|254819936|ref|ZP_05224937.1| TrnB1 protein [Mycobacterium intracellulare ATCC 13950]
          Length = 262

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 74/151 (49%)

Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
           IG + T +++AG   +AI A++G+  I EE+DA+R MG++ V+ L+ PR+ AL ++  LL
Sbjct: 100 IGPITTVLVVAGTGATAICADLGARTIREELDAMRVMGINPVQRLLVPRVLALCLNGLLL 159

Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330
             +     ++G+      +  +    + +       +A++     KA       G +A  
Sbjct: 160 NSINTIVGLVGSFFFSVYFQHVTPGAWAASLTLLVKIADVAIAFFKAALFGLVAGTIACY 219

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           +G  VG     +G  V   VV +   + +I+
Sbjct: 220 KGVTVGGGPQGVGNAVNETVVYTFMALFVIN 250


>gi|218463600|ref|ZP_03503691.1| probable ABC transporter, permease protein [Rhizobium etli Kim 5]
          Length = 191

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 87/179 (48%), Gaps = 19/179 (10%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG-- 67
           R +GNW+S  +  +  D    +++  +S    VDLS IT+IDT G  L+    ++     
Sbjct: 25  RLSGNWRSAYVHLVLRDFEKLLHQ--KSGDLTVDLSDITDIDTAGIWLLCRLKKEAEAAG 82

Query: 68  -KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
             ++ +G + HI+++ ++ S    K     + + S        +   IGK      ++  
Sbjct: 83  RTVRFEGTNPHIDEMLAMFSEEPAKPEPEPREKISLA----ARILAPIGKMTYDVWDNLA 138

Query: 127 SQAHILGLVISNTGEFCASSYKF-KGFLLS---LIRQMYYVGVSGVPVVILISFVTGAV 181
           +  +ILG  +        +  KF +G  +S   ++ Q+ ++GV  VP+++L+SF+ GA+
Sbjct: 139 AAMYILGSAVR------GAQMKFGRGSGVSPASIVNQIDHMGVRAVPIILLMSFLIGAI 191


>gi|226306858|ref|YP_002766818.1| YrbE family protein [Rhodococcus erythropolis PR4]
 gi|226185975|dbj|BAH34079.1| putative YrbE family protein [Rhodococcus erythropolis PR4]
          Length = 257

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 26/205 (12%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           VP  +L+SF    ++ + GA  LS  GA + ++         ++G ++T +++AG   +A
Sbjct: 59  VPFTVLVSFTLNILLREIGAADLSGAGAALGAVT--------QVGPVVTVLIVAGAGATA 110

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++GS  I EEIDA+  +G+D +  L+ PR+ A  +   LL  L     I G      
Sbjct: 111 IAADLGSRTIREEIDAMEVLGIDPINRLVIPRVVASTVVALLLNGLVCVIGIAGGY---- 166

Query: 288 KYYDIPFAVFFSRFHSTATLANI--FTGL-------IKAPFMACAIGIVAMKEGFAVGVH 338
                 F+VF    +  A +  I   TGL       +KA       G+VA   G +V   
Sbjct: 167 -----AFSVFLQGVNPGAFVEGITLLTGLPEVALSMVKAALFGMLAGLVACYRGLSVRGG 221

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSL 363
              +G+ V   VV +   + +++++
Sbjct: 222 PKGVGEAVNETVVYAFMALFVVNTI 246


>gi|326799081|ref|YP_004316900.1| hypothetical protein Sph21_1668 [Sphingobacterium sp. 21]
 gi|326549845|gb|ADZ78230.1| protein of unknown function DUF140 [Sphingobacterium sp. 21]
          Length = 244

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 23/141 (16%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM------------ 203
           ++ +M  +GV  + ++ +IS   GAV+  Q AFQL          DL+            
Sbjct: 30  IMHEMNSIGVGSLGLIAIISTFIGAVMTMQIAFQLVS--------DLIPNSIIGQINRDS 81

Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263
           SIL+L      ++A+++AG+ GS+I ++IGSM++ E+IDA+  MG++    LI P+I A 
Sbjct: 82  SILELSPT---ISALVLAGKVGSSISSQIGSMRVTEQIDALEIMGINAPGYLILPKILAG 138

Query: 264 IISLPLLTILANFSAIIGASI 284
           I  +P+L IL+ F A+ G  I
Sbjct: 139 ITMVPVLVILSIFLALSGGLI 159


>gi|325286981|ref|YP_004262771.1| hypothetical protein Celly_2079 [Cellulophaga lytica DSM 7489]
 gi|324322435|gb|ADY29900.1| protein of unknown function DUF140 [Cellulophaga lytica DSM 7489]
          Length = 260

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 1/75 (1%)

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
           E     T++++AG+ GS I + IG+M++ E+IDA+  MG++ +  L+ P+I AL++  P 
Sbjct: 101 EFAPTFTSIIMAGKVGSYITSSIGTMRVTEQIDALEVMGVNSLNYLVFPKIIALLL-YPF 159

Query: 270 LTILANFSAIIGASI 284
              +A +  I G  I
Sbjct: 160 AIAIAMYVGIFGGWI 174


>gi|118467326|ref|YP_879397.1| ABC transporter transmembrane protein [Mycobacterium avium 104]
 gi|254773147|ref|ZP_05214663.1| ABC-transporter integral membrane protein [Mycobacterium avium
           subsp. avium ATCC 25291]
 gi|118168613|gb|ABK69510.1| ABC-transporter integral membrane protein [Mycobacterium avium 104]
          Length = 285

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 64/107 (59%), Gaps = 3/107 (2%)

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G +GV VV+   F  GA++A +G   L+  G    +  + S++  RE+  ++ ++  A +
Sbjct: 72  GTAGVAVVL--GFTAGALVAVEGYNFLNLLGLGPATGIISSLVNTRELAPIMASLAFAMQ 129

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPL 269
           +G    A++G+M+I EEIDA+ ++ +  +  L++ R+ A +I+ +PL
Sbjct: 130 AGCRFTAQLGAMRIAEEIDALESLAIRPIPFLVTTRLMASVIAVIPL 176


>gi|325003317|ref|ZP_08124429.1| integral membrane protein yrbe4b [Pseudonocardia sp. P1]
          Length = 280

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 60/108 (55%), Gaps = 3/108 (2%)

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           +S   G+++  QG   L   G E  +  + +    R I  L+ A  +    G+   A++G
Sbjct: 75  LSLFVGSLVGLQGFRALDALGVEALTGFITAYFNTRSIAPLVAASALTATLGAGFTAQLG 134

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLT--ILANFSA 278
           +M+I+EEIDA+  M +  V  L++ R+ A I++ +P+ T  +LA+++A
Sbjct: 135 AMRISEEIDALEVMAVPSVPYLVTTRVIAGIVAIIPIYTLGLLASYAA 182


>gi|254818556|ref|ZP_05223557.1| ABC-transporter integral membrane protein [Mycobacterium
           intracellulare ATCC 13950]
          Length = 285

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 64/107 (59%), Gaps = 3/107 (2%)

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G +GV VV+   F  GA++A +G   L+  G    +  + S++  RE+  ++ ++  A +
Sbjct: 72  GTAGVAVVL--GFTAGALVAVEGYNFLNLLGLGPATGIISSLVNTRELAPIMASLAFAMQ 129

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPL 269
           +G    A++G+M+I EEIDA+ ++ +  +  L++ R+ A +I+ +PL
Sbjct: 130 AGCRFTAQLGAMRIAEEIDALESLAIRPIPFLVTTRLMASVIAVIPL 176


>gi|226361937|ref|YP_002779715.1| YrbE family protein [Rhodococcus opacus B4]
 gi|226240422|dbj|BAH50770.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 286

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 98/197 (49%), Gaps = 9/197 (4%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V+++ F+T   G ++A QG   L   G E  +    + + +R +  +++ + +A   G+ 
Sbjct: 75  VVIVGFMTLSGGTLLAIQGFSSLGNIGVEALTGFFAAFINVRIVAPVISGIALAATIGAG 134

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
             A++G+M+I+EEIDA+  MG+  +  L+S R+ A +IS+  L  +A   + + +     
Sbjct: 135 ATAQLGAMRISEEIDALEVMGIRSMSYLVSTRLIAGMISIVPLYSMAVIMSFVASQFTTT 194

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF-----AVGVHSNSL 342
             Y     V+   F +     ++F   ++A  MA  + ++    G+       GV   ++
Sbjct: 195 YVYGQSSGVYDHYFTTFLRPTDLFWSFLQAVVMALVVMLIHCYYGYHARGGPAGV-GEAV 253

Query: 343 GKKVTTCVVQSISIVII 359
           G+ V T ++  +S+ +I
Sbjct: 254 GRAVRTSLIAVVSVTLI 270


>gi|319952306|ref|YP_004163573.1| hypothetical protein Celal_0740 [Cellulophaga algicola DSM 14237]
 gi|319420966|gb|ADV48075.1| protein of unknown function DUF140 [Cellulophaga algicola DSM
           14237]
          Length = 245

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 1/75 (1%)

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
           E     T++++AG+ GS I + IG+M++ E+IDA+  MG++ +  L+ P+I AL++  P 
Sbjct: 86  EFAPTFTSIIMAGKVGSYITSSIGTMRVTEQIDALEVMGVNSLNYLVFPKIVALLL-YPF 144

Query: 270 LTILANFSAIIGASI 284
              +A +  I G  I
Sbjct: 145 AIAIAMYVGIFGGWI 159


>gi|229492731|ref|ZP_04386532.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
 gi|229320390|gb|EEN86210.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
          Length = 257

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 26/205 (12%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           VP  +L+SF    ++ + GA  LS  GA + ++         ++G ++T +++AG   +A
Sbjct: 59  VPFTVLVSFTLNILLREIGAADLSGAGAALGAVT--------QVGPVVTVLIVAGAGATA 110

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++GS  I EEIDA+  +G+D +  L+ PR+ A  +   LL  L     I G      
Sbjct: 111 IAADLGSRTIREEIDAMEVLGIDPITRLVIPRVVASTVVALLLNGLVCVIGIAGGY---- 166

Query: 288 KYYDIPFAVFFSRFHSTATLANI--FTGL-------IKAPFMACAIGIVAMKEGFAVGVH 338
                 F+VF    +  A +  I   TGL       +KA       G+VA   G +V   
Sbjct: 167 -----AFSVFLQGVNPGAFVEGITLLTGLPEVALSMVKAALFGMLAGLVACYRGLSVRGG 221

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSL 363
              +G+ V   VV +   + +++++
Sbjct: 222 PKGVGEAVNETVVYAFMALFVVNTI 246


>gi|324999496|ref|ZP_08120608.1| hypothetical protein PseP1_12046 [Pseudonocardia sp. P1]
          Length = 285

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 4/99 (4%)

Query: 180 AVIAQQ----GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
           AV+A Q    G F  +  G   ++  + S+  +R +  ++   ++A + G  IVAE+GSM
Sbjct: 81  AVLALQSGVGGHFIFANPGINSYAGAIYSVALMRGLVEVIFGWIVAAKIGCGIVAEMGSM 140

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +INEE+DA+  MGL     L   R+ A ++ LP L + A
Sbjct: 141 RINEEVDALDVMGLRSRAYLAGTRVAAAMLVLPFLFVTA 179


>gi|260188552|ref|ZP_05766026.1| hypothetical protein MtubCP_21372 [Mycobacterium tuberculosis
           CPHL_A]
 gi|289449202|ref|ZP_06438946.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           CPHL_A]
 gi|289422160|gb|EFD19361.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           CPHL_A]
          Length = 280

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 3/114 (2%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V   ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+ 
Sbjct: 69  VGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAG 128

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL--LTILANFSA 278
             A++G+M+++EEIDA+  M +  V  L+S R+ A L+  +PL  L++LA F A
Sbjct: 129 ATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFA 182


>gi|15610636|ref|NP_218017.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis H37Rv]
 gi|15843112|ref|NP_338149.1| hypothetical protein MT3604 [Mycobacterium tuberculosis CDC1551]
 gi|31794676|ref|NP_857169.1| integral membrane protein YrbE4b [Mycobacterium bovis AF2122/97]
 gi|121639419|ref|YP_979643.1| integral membrane protein YrbE4b [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148663364|ref|YP_001284887.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis H37Ra]
 gi|148824707|ref|YP_001289461.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis F11]
 gi|215405541|ref|ZP_03417722.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis
           02_1987]
 gi|215413413|ref|ZP_03422097.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis
           94_M4241A]
 gi|215429006|ref|ZP_03426925.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis T92]
 gi|215432468|ref|ZP_03430387.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis
           EAS054]
 gi|215447833|ref|ZP_03434585.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis T85]
 gi|218755277|ref|ZP_03534073.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis GM
           1503]
 gi|224991915|ref|YP_002646604.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253800542|ref|YP_003033543.1| hypothetical protein TBMG_03545 [Mycobacterium tuberculosis KZN
           1435]
 gi|254234086|ref|ZP_04927411.1| hypothetical integral membrane protein yrbE4B [Mycobacterium
           tuberculosis C]
 gi|254366846|ref|ZP_04982887.1| hypothetical integral membrane protein yrbE4B [Mycobacterium
           tuberculosis str. Haarlem]
 gi|254552602|ref|ZP_05143049.1| hypothetical protein Mtube_19500 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260206867|ref|ZP_05774358.1| hypothetical protein MtubK8_21501 [Mycobacterium tuberculosis K85]
 gi|289555766|ref|ZP_06444976.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           KZN 605]
 gi|289576234|ref|ZP_06456461.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis K85]
 gi|289747336|ref|ZP_06506714.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis
           02_1987]
 gi|289752221|ref|ZP_06511599.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           T92]
 gi|289755630|ref|ZP_06515008.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
 gi|289759659|ref|ZP_06519037.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|289763680|ref|ZP_06523058.1| hypothetical integral membrane protein yrbE4B [Mycobacterium
           tuberculosis GM 1503]
 gi|294995730|ref|ZP_06801421.1| hypothetical protein Mtub2_14798 [Mycobacterium tuberculosis 210]
 gi|297636156|ref|ZP_06953936.1| hypothetical protein MtubK4_18620 [Mycobacterium tuberculosis KZN
           4207]
 gi|297733156|ref|ZP_06962274.1| hypothetical protein MtubKR_18790 [Mycobacterium tuberculosis KZN
           R506]
 gi|298526980|ref|ZP_07014389.1| ABC-transporter integral membrane protein [Mycobacterium
           tuberculosis 94_M4241A]
 gi|306777850|ref|ZP_07416187.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu001]
 gi|306782581|ref|ZP_07420918.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu002]
 gi|306786399|ref|ZP_07424721.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu003]
 gi|306790768|ref|ZP_07429090.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu004]
 gi|306795298|ref|ZP_07433600.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu005]
 gi|306799486|ref|ZP_07437788.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu006]
 gi|306805332|ref|ZP_07442000.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu008]
 gi|306809518|ref|ZP_07446186.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu007]
 gi|306969625|ref|ZP_07482286.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu009]
 gi|306973968|ref|ZP_07486629.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu010]
 gi|307081676|ref|ZP_07490846.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu011]
 gi|307086284|ref|ZP_07495397.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu012]
 gi|313660487|ref|ZP_07817367.1| hypothetical protein MtubKV_18785 [Mycobacterium tuberculosis KZN
           V2475]
 gi|2924437|emb|CAA17737.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE4B
           [Mycobacterium tuberculosis H37Rv]
 gi|13883458|gb|AAK47963.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|31620273|emb|CAD95716.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE4B
           [Mycobacterium bovis AF2122/97]
 gi|121495067|emb|CAL73553.1| Conserved hypothetical integral membrane protein yrbE4B
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124599615|gb|EAY58719.1| hypothetical integral membrane protein yrbE4B [Mycobacterium
           tuberculosis C]
 gi|134152355|gb|EBA44400.1| hypothetical integral membrane protein yrbE4B [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148507516|gb|ABQ75325.1| conserved hypothetical integral membrane protein YrbE4b
           [Mycobacterium tuberculosis H37Ra]
 gi|148723234|gb|ABR07859.1| hypothetical integral membrane protein yrbE4B [Mycobacterium
           tuberculosis F11]
 gi|224775030|dbj|BAH27836.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253322045|gb|ACT26648.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           KZN 1435]
 gi|289440398|gb|EFD22891.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           KZN 605]
 gi|289540665|gb|EFD45243.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis K85]
 gi|289687864|gb|EFD55352.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis
           02_1987]
 gi|289692808|gb|EFD60237.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           T92]
 gi|289696217|gb|EFD63646.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
 gi|289711186|gb|EFD75202.1| hypothetical integral membrane protein yrbE4B [Mycobacterium
           tuberculosis GM 1503]
 gi|289715223|gb|EFD79235.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|298496774|gb|EFI32068.1| ABC-transporter integral membrane protein [Mycobacterium
           tuberculosis 94_M4241A]
 gi|308213830|gb|EFO73229.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu001]
 gi|308324771|gb|EFP13622.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu002]
 gi|308329035|gb|EFP17886.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu003]
 gi|308332874|gb|EFP21725.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu004]
 gi|308336457|gb|EFP25308.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu005]
 gi|308340335|gb|EFP29186.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu006]
 gi|308344190|gb|EFP33041.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu007]
 gi|308348120|gb|EFP36971.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu008]
 gi|308352884|gb|EFP41735.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu009]
 gi|308356697|gb|EFP45548.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu010]
 gi|308360651|gb|EFP49502.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu011]
 gi|308364268|gb|EFP53119.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu012]
 gi|323717842|gb|EGB27033.1| hypothetical protein TMMG_03674 [Mycobacterium tuberculosis
           CDC1551A]
 gi|326905342|gb|EGE52275.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           W-148]
 gi|328460273|gb|AEB05696.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           KZN 4207]
 gi|328864232|gb|AEB53199.1| conserved integral membrane protein YRBE4B [Mycobacterium
           tuberculosis]
          Length = 280

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 3/114 (2%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V   ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+ 
Sbjct: 69  VGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAG 128

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL--LTILANFSA 278
             A++G+M+++EEIDA+  M +  V  L+S R+ A L+  +PL  L++LA F A
Sbjct: 129 ATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFA 182


>gi|163754162|ref|ZP_02161285.1| hypothetical protein KAOT1_21107 [Kordia algicida OT-1]
 gi|161326376|gb|EDP97702.1| hypothetical protein KAOT1_21107 [Kordia algicida OT-1]
          Length = 233

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 61/114 (53%), Gaps = 2/114 (1%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ-LREIGVLLTAVMIAGRSGSAI 228
           +V  ISF  G V++ Q A  ++      + +   +    + E      ++++AG+ GS I
Sbjct: 33  IVCFISFFVGGVVSIQTALNMNNPLIPKYLVGFATRQSVILEFAPTFISIIMAGKVGSFI 92

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
            + IG+M++ E+IDA+  MG++ +  L+ P+I AL +  P +  +A F  I G 
Sbjct: 93  TSSIGTMRVTEQIDALEVMGVNSLNYLVFPKIIALSL-YPFVITIAMFLGIFGG 145


>gi|86143923|ref|ZP_01062291.1| hypothetical protein MED217_03715 [Leeuwenhoekiella blandensis
           MED217]
 gi|85829630|gb|EAQ48093.1| hypothetical protein MED217_03715 [Leeuwenhoekiella blandensis
           MED217]
          Length = 245

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 8/117 (6%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ----LREIGVLLTAVMIAGRSG 225
           +V  ISF  G V+A Q A  +      I    L+        + E      ++++AG+  
Sbjct: 45  IVCFISFFVGGVVAIQTALNMDN---PILPKSLIGFASRQSIILEFAPTFISIIMAGKVS 101

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           S I + IG+M++ E+IDA+  MG++ +  L+ P+I A++   P +  +A F  I+G 
Sbjct: 102 SFITSSIGTMRVTEQIDALEVMGINSLNYLVFPKIIAMLF-YPFVIAIAMFLGILGG 157


>gi|85860837|ref|YP_463039.1| ABC transporter permease [Syntrophus aciditrophicus SB]
 gi|85723928|gb|ABC78871.1| ABC transporter permease protein [Syntrophus aciditrophicus SB]
          Length = 269

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 60/115 (52%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           ++ Q+Y+  V  +P+ I IS + G  +       +   G   +  +++    + E+   +
Sbjct: 55  IVTQLYFTAVQILPLFISISVILGLFLMGIVFESIKNLGMTGYLGNILMGFIVTELCPFM 114

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
           T +M+A RSG+AI  EI  MK+N+E DA+    +D    +  PRI   ++S+ LL
Sbjct: 115 TVLMLALRSGAAINTEIAVMKVNKEFDALSVFNIDIFDYIYVPRILNGVVSVVLL 169


>gi|118618293|ref|YP_906625.1| integral membrane protein, Yrb3B [Mycobacterium ulcerans Agy99]
 gi|118570403|gb|ABL05154.1| conserved hypothetical integral membrane protein, Yrb3B
           [Mycobacterium ulcerans Agy99]
          Length = 230

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 1/106 (0%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V +V  +   TGA++A QG  Q +  G E  +    +    REI      V +A   G+ 
Sbjct: 19  VVIVGFLGMTTGAIVAVQGYNQFASVGVEALTGFASAFFNAREIQPGTVMVALAATVGAG 78

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPLLTI 272
             A++G+M+INEEIDA+  +G+  V  L S R+ A +++++PL  +
Sbjct: 79  ATAQLGAMRINEEIDALEVIGIRSVSYLASTRVLAGVVVAIPLFCV 124


>gi|262203810|ref|YP_003275018.1| hypothetical protein Gbro_3951 [Gordonia bronchialis DSM 43247]
 gi|262087157|gb|ACY23125.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247]
          Length = 283

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 84/166 (50%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V VV  ++  TG  IA QG   L+  G E  +    + + +R    +++ + +A   G+ 
Sbjct: 72  VVVVGFLTLFTGGTIAVQGYSSLANIGVEALTGFFSAFINVRIAVPVISGIALAATIGAG 131

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
             A++G+M+++EEIDA+ TM +  +  L+S RI A +I++  L  LA+ ++ + +     
Sbjct: 132 ATAQLGAMRVSEEIDALETMAISSIPYLVSTRIVAGLIAIIPLYALASLASFLASRFATV 191

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
             Y     V+   F +    ++I    ++A  MA A+ ++    GF
Sbjct: 192 FIYGQSPGVYDHYFDTFLIPSDILWSFVQAICMAVAVMLIHTYYGF 237


>gi|291446775|ref|ZP_06586165.1| ABC-transporter integral membrane protein [Streptomyces roseosporus
           NRRL 15998]
 gi|291349722|gb|EFE76626.1| ABC-transporter integral membrane protein [Streptomyces roseosporus
           NRRL 15998]
          Length = 113

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/98 (30%), Positives = 51/98 (52%)

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           +I+G  GSAI A++GS KI EE+DA+  MG+  ++ L+ PR+ A ++   LL  L +   
Sbjct: 16  VISGAPGSAICADLGSRKIREELDAMEVMGVSPIQRLVVPRVLATMLVAVLLNGLISVVG 75

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316
            +G         D     + + F + A L +++    K
Sbjct: 76  TLGGYFFNVIMQDGTPGAYLASFSALAQLPDLYISEFK 113


>gi|226306857|ref|YP_002766817.1| YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229492717|ref|ZP_04386518.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
 gi|226185974|dbj|BAH34078.1| putative YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229320376|gb|EEN86196.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
          Length = 290

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 1/106 (0%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V VV  ++  +G  IA QG   L   G E  +    + + +R    ++  + ++   G+ 
Sbjct: 79  VAVVGFLTLASGGTIAIQGFSSLGNIGVEALTGFFSAFINVRIAAPVIAGIGLSATIGAG 138

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTI 272
             A+IG+M+I+EEIDA+ +M +  V  ++S R+ A +I+ LPL ++
Sbjct: 139 STAQIGAMRISEEIDALESMAISSVPYVVSTRVTAGMIAILPLYSL 184


>gi|296165084|ref|ZP_06847637.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295899577|gb|EFG79030.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 289

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 78/142 (54%), Gaps = 9/142 (6%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV----ILISFVT---GAVIAQQGAF 188
           +S  G+   + ++++  LL ++ QM  +G   + VV     ++ F+T   G+++A QG  
Sbjct: 40  LSAIGQIPFAVHRYRKELLRMVAQMG-MGTGAMAVVGGTAAIVGFITLSAGSLVAIQGYA 98

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L   G E F+  L +++ +R +  +     +A   G+   AE+G+M+I+EEIDA+  M 
Sbjct: 99  TLGNIGVEAFTGFLAALVNVRFVAPVAAGQALAATVGAGATAELGAMRISEEIDALEVMS 158

Query: 249 LDFVRILISPRIWA-LIISLPL 269
           +  V  L S R+ A LI+ +PL
Sbjct: 159 IRSVPFLASTRVVAGLIVIIPL 180


>gi|289756667|ref|ZP_06516045.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|289712231|gb|EFD76243.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|326902420|gb|EGE49353.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           W-148]
          Length = 295

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 4/106 (3%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V +I FVT   G++IA QG   L   G E F+    ++   R    +++ V +A   G+ 
Sbjct: 84  VAIIGFVTLSGGSLIAIQGFASLGNIGVETFTGFFAALANTRVAAPIVSGVALAATVGAG 143

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRI-WALIISLPLLTI 272
             A++G+M+I+EEIDA+  MG+  +  L+S RI   L++ +PL  +
Sbjct: 144 ATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYAL 189


>gi|215444701|ref|ZP_03431453.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis T85]
 gi|294996100|ref|ZP_06801791.1| hypothetical protein Mtub2_16770 [Mycobacterium tuberculosis 210]
          Length = 246

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 59/103 (57%), Gaps = 4/103 (3%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V +I FVT   G++IA QG   L   G E F+    ++   R    +++ V +A   G+ 
Sbjct: 35  VAIIGFVTLSGGSLIAIQGFASLGNIGVETFTGFFAALANTRVAAPIVSGVALAATVGAG 94

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRI-WALIISLPL 269
             A++G+M+I+EEIDA+  MG+  +  L+S RI   L++ +PL
Sbjct: 95  ATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPL 137


>gi|226361227|ref|YP_002779005.1| YrbE family protein [Rhodococcus opacus B4]
 gi|226239712|dbj|BAH50060.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 302

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 60/124 (48%)

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           ++G+  I EEI+AIR MG+D V+ L+ PR  A+I   P+L I+   + +    ++     
Sbjct: 156 DLGARAIREEIEAIRVMGIDPVQRLVVPRFIAMIAIAPMLCIVIVAAGVAAGLVISANVN 215

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
           D+    F+  F S AT  ++   ++K+   A  + ++A   G         +   V   V
Sbjct: 216 DVVPGSFWQSFGSFATPTDLVFSVLKSVIFAALVVLIASLRGLEAKGGPKGVANAVNASV 275

Query: 351 VQSI 354
           V S+
Sbjct: 276 VLSV 279


>gi|126432720|ref|YP_001068411.1| hypothetical protein Mjls_0107 [Mycobacterium sp. JLS]
 gi|126232520|gb|ABN95920.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 297

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 84/160 (52%), Gaps = 11/160 (6%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV----VILISFVT---G 179
           S  H+   V++  G    +   ++  +L LI ++  +G   + V    V ++ FVT   G
Sbjct: 39  SVGHVAWFVVTAVGSIGHALRYYRKEVLRLIAEIG-MGTGAMAVIGGTVAIVGFVTLSGG 97

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           ++IA QG   L   G E F+    +++ +R    +++   +A   G+   AE+G+M+I+E
Sbjct: 98  SLIAIQGFASLGNIGVEAFTGFFAALVNVRIAAPVVSGQALAATVGAGATAELGAMRISE 157

Query: 240 EIDAIRTMGLDFVRILISPRIWA---LIISLPLLTILANF 276
           EIDA+  MG+  +  L+S RI A   +II L  + I+ +F
Sbjct: 158 EIDALEVMGIKSISYLVSTRIMAGFIVIIPLYAMAIIMSF 197


>gi|289441977|ref|ZP_06431721.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           T46]
 gi|289568521|ref|ZP_06448748.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           T17]
 gi|289749085|ref|ZP_06508463.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           T92]
 gi|289414896|gb|EFD12136.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           T46]
 gi|289542275|gb|EFD45923.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           T17]
 gi|289689672|gb|EFD57101.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           T92]
          Length = 295

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 4/106 (3%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V +I FVT   G++IA QG   L   G E F+    ++   R    +++ V +A   G+ 
Sbjct: 84  VAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIVSGVALAATVGAG 143

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRI-WALIISLPLLTI 272
             A++G+M+I+EEIDA+  MG+  +  L+S RI   L++ +PL  +
Sbjct: 144 ATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYAL 189


>gi|228473179|ref|ZP_04057934.1| conserved hypothetical protein [Capnocytophaga gingivalis ATCC
           33624]
 gi|228275329|gb|EEK14121.1| conserved hypothetical protein [Capnocytophaga gingivalis ATCC
           33624]
          Length = 245

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 7/100 (7%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR----EIGVLLTAVMIAGRSG 225
           ++  IS   GAVIA Q A  +      +    L+     +    E     T++++AG+ G
Sbjct: 45  IIAFISLFVGAVIAIQMALNIDN---PLIPKSLIGFATRQTIVLEFAPTFTSIIVAGKVG 101

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
           S I + IG+M++ E+IDA+  MG++ +  LI P+I AL++
Sbjct: 102 SFITSSIGTMRVTEQIDALDIMGVNSLNYLIFPKIIALLL 141


>gi|108797097|ref|YP_637294.1| hypothetical protein Mmcs_0117 [Mycobacterium sp. MCS]
 gi|119866182|ref|YP_936134.1| hypothetical protein Mkms_0126 [Mycobacterium sp. KMS]
 gi|108767516|gb|ABG06238.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
 gi|119692271|gb|ABL89344.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
          Length = 296

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 84/160 (52%), Gaps = 11/160 (6%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV----VILISFVT---G 179
           S  H+   V++  G    +   ++  +L LI ++  +G   + V    V ++ FVT   G
Sbjct: 38  SVGHVAWFVVTAVGSIGHALRYYRKEVLRLIAEIG-MGTGAMAVIGGTVAIVGFVTLSGG 96

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           ++IA QG   L   G E F+    +++ +R    +++   +A   G+   AE+G+M+I+E
Sbjct: 97  SLIAIQGFASLGNIGVEAFTGFFAALVNVRIAAPVVSGQALAATVGAGATAELGAMRISE 156

Query: 240 EIDAIRTMGLDFVRILISPRIWA---LIISLPLLTILANF 276
           EIDA+  MG+  +  L+S RI A   +II L  + I+ +F
Sbjct: 157 EIDALEVMGIKSISYLVSTRIMAGFIVIIPLYAMAIIMSF 196


>gi|15607728|ref|NP_215102.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis H37Rv]
 gi|31791770|ref|NP_854263.1| integral membrane protein YrbE2b [Mycobacterium bovis AF2122/97]
 gi|121636506|ref|YP_976729.1| integral membrane protein YrbE2b [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148660357|ref|YP_001281880.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis H37Ra]
 gi|148821790|ref|YP_001286544.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis F11]
 gi|224988978|ref|YP_002643665.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253797522|ref|YP_003030523.1| hypothetical protein TBMG_00595 [Mycobacterium tuberculosis KZN
           1435]
 gi|289446141|ref|ZP_06435885.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           CPHL_A]
 gi|289573188|ref|ZP_06453415.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis K85]
 gi|289744302|ref|ZP_06503680.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis
           02_1987]
 gi|289760707|ref|ZP_06520085.1| hypothetical integral membrane protein yrbE2B [Mycobacterium
           tuberculosis GM 1503]
 gi|298524075|ref|ZP_07011484.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|308231594|ref|ZP_07413029.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu001]
 gi|308370001|ref|ZP_07419915.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu002]
 gi|308370453|ref|ZP_07421552.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu003]
 gi|308371712|ref|ZP_07425924.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu004]
 gi|308373528|ref|ZP_07432668.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu005]
 gi|308374049|ref|ZP_07434638.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu006]
 gi|308375204|ref|ZP_07443071.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu007]
 gi|308376450|ref|ZP_07438864.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu008]
 gi|308377469|ref|ZP_07479264.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu009]
 gi|308378677|ref|ZP_07483457.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu010]
 gi|308379821|ref|ZP_07487689.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu011]
 gi|308395898|ref|ZP_07492196.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu012]
 gi|2222770|emb|CAB09950.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE2B
           [Mycobacterium tuberculosis H37Rv]
 gi|31617357|emb|CAD93465.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE2B
           [Mycobacterium bovis AF2122/97]
 gi|121492153|emb|CAL70618.1| Conserved hypothetical integral membrane protein yrbE2B
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148504509|gb|ABQ72318.1| conserved hypothetical integral membrane protein YrbE2b
           [Mycobacterium tuberculosis H37Ra]
 gi|148720317|gb|ABR04942.1| hypothetical integral membrane protein yrbE2B [Mycobacterium
           tuberculosis F11]
 gi|224772091|dbj|BAH24897.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253319025|gb|ACT23628.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           KZN 1435]
 gi|289419099|gb|EFD16300.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           CPHL_A]
 gi|289537619|gb|EFD42197.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis K85]
 gi|289684830|gb|EFD52318.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis
           02_1987]
 gi|289708213|gb|EFD72229.1| hypothetical integral membrane protein yrbE2B [Mycobacterium
           tuberculosis GM 1503]
 gi|298493869|gb|EFI29163.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|308216591|gb|EFO75990.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu001]
 gi|308325672|gb|EFP14523.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu002]
 gi|308331898|gb|EFP20749.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu003]
 gi|308335685|gb|EFP24536.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu004]
 gi|308337264|gb|EFP26115.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu005]
 gi|308343189|gb|EFP32040.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu006]
 gi|308347056|gb|EFP35907.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu007]
 gi|308350999|gb|EFP39850.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu008]
 gi|308355633|gb|EFP44484.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu009]
 gi|308359588|gb|EFP48439.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu010]
 gi|308363516|gb|EFP52367.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu011]
 gi|308367197|gb|EFP56048.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu012]
 gi|328457305|gb|AEB02728.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           KZN 4207]
          Length = 295

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 4/106 (3%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V +I FVT   G++IA QG   L   G E F+    ++   R    +++ V +A   G+ 
Sbjct: 84  VAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIVSGVALAATVGAG 143

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRI-WALIISLPLLTI 272
             A++G+M+I+EEIDA+  MG+  +  L+S RI   L++ +PL  +
Sbjct: 144 ATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYAL 189


>gi|289752627|ref|ZP_06512005.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
 gi|289693214|gb|EFD60643.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
          Length = 295

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 4/106 (3%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V +I FVT   G++IA QG   L   G E F+    ++   R    +++ V +A   G+ 
Sbjct: 84  VAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIVSGVALAATVGAG 143

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRI-WALIISLPLLTI 272
             A++G+M+I+EEIDA+  MG+  +  L+S RI   L++ +PL  +
Sbjct: 144 ATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYAL 189


>gi|167969011|ref|ZP_02551288.1| hypothetical integral membrane protein yrbE2B [Mycobacterium
           tuberculosis H37Ra]
 gi|215402356|ref|ZP_03414537.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis
           02_1987]
 gi|215410129|ref|ZP_03418937.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis
           94_M4241A]
 gi|215425820|ref|ZP_03423739.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis T92]
 gi|215429421|ref|ZP_03427340.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis
           EAS054]
 gi|218752228|ref|ZP_03531024.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis GM
           1503]
 gi|219556430|ref|ZP_03535506.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis T17]
 gi|254549543|ref|ZP_05139990.1| hypothetical protein Mtube_03620 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260185465|ref|ZP_05762939.1| hypothetical protein MtubCP_05439 [Mycobacterium tuberculosis
           CPHL_A]
 gi|260199593|ref|ZP_05767084.1| hypothetical protein MtubT4_05539 [Mycobacterium tuberculosis T46]
 gi|260203752|ref|ZP_05771243.1| hypothetical protein MtubK8_05504 [Mycobacterium tuberculosis K85]
 gi|297633082|ref|ZP_06950862.1| hypothetical protein MtubK4_03110 [Mycobacterium tuberculosis KZN
           4207]
 gi|297730060|ref|ZP_06959178.1| hypothetical protein MtubKR_03155 [Mycobacterium tuberculosis KZN
           R506]
 gi|313657387|ref|ZP_07814267.1| hypothetical protein MtubKV_03145 [Mycobacterium tuberculosis KZN
           V2475]
          Length = 246

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 4/106 (3%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V +I FVT   G++IA QG   L   G E F+    ++   R    +++ V +A   G+ 
Sbjct: 35  VAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIVSGVALAATVGAG 94

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRI-WALIISLPLLTI 272
             A++G+M+I+EEIDA+  MG+  +  L+S RI   L++ +PL  +
Sbjct: 95  ATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYAL 140


>gi|118463838|ref|YP_884136.1| hypothetical protein MAV_5016 [Mycobacterium avium 104]
 gi|254776558|ref|ZP_05218074.1| hypothetical protein MaviaA2_18084 [Mycobacterium avium subsp.
           avium ATCC 25291]
 gi|118165125|gb|ABK66022.1| conserved hypothetical protein [Mycobacterium avium 104]
          Length = 289

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 94/181 (51%), Gaps = 13/181 (7%)

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
           RS F  + +NL+ + G    + ++D    A   G+ +++      S Y+ +   L LI Q
Sbjct: 8   RSRFPRAAENLNRY-GLAAARGLDDVGQMAWFGGVALAHI-PHALSHYRKE--TLRLIAQ 63

Query: 160 MYYVGVSGVPV----VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           +  +G   + V    V ++ FVT    +++A QG   L   G E F+    +++ +R   
Sbjct: 64  IG-MGTGAMAVIGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAA 122

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPLLT 271
            ++T + +A   G+   AE+G+M+I+EEIDA+  MG+  +  L + RI A L++ +PL  
Sbjct: 123 PVVTGIAMAATVGAGATAELGAMRISEEIDALEVMGIKSISFLATTRIMAGLVVIIPLYA 182

Query: 272 I 272
           +
Sbjct: 183 L 183


>gi|289552841|ref|ZP_06442051.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           KZN 605]
 gi|289437473|gb|EFD19966.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           KZN 605]
          Length = 294

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 4/106 (3%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V +I FVT   G++IA QG   L   G E F+    ++   R    +++ V +A   G+ 
Sbjct: 83  VAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIVSGVALAATVGAG 142

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRI-WALIISLPLLTI 272
             A++G+M+I+EEIDA+  MG+  +  L+S RI   L++ +PL  +
Sbjct: 143 ATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYAL 188


>gi|15839990|ref|NP_335027.1| hypothetical protein MT0617 [Mycobacterium tuberculosis CDC1551]
 gi|254230928|ref|ZP_04924255.1| hypothetical integral membrane protein yrbE2B [Mycobacterium
           tuberculosis C]
 gi|254363546|ref|ZP_04979592.1| hypothetical integral membrane protein yrbE2B [Mycobacterium
           tuberculosis str. Haarlem]
 gi|13880132|gb|AAK44841.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|124599987|gb|EAY58997.1| hypothetical integral membrane protein yrbE2B [Mycobacterium
           tuberculosis C]
 gi|134149060|gb|EBA41105.1| hypothetical integral membrane protein yrbE2B [Mycobacterium
           tuberculosis str. Haarlem]
 gi|323720940|gb|EGB30005.1| hypothetical protein TMMG_03291 [Mycobacterium tuberculosis
           CDC1551A]
          Length = 295

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 4/106 (3%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V +I FVT   G++IA QG   L   G E F+    ++   R    +++ V +A   G+ 
Sbjct: 84  VAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIVSGVALAATVGAG 143

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRI-WALIISLPLLTI 272
             A++G+M+I+EEIDA+  MG+  +  L+S RI   L++ +PL  +
Sbjct: 144 ATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYAL 189


>gi|227536152|ref|ZP_03966201.1| ABC superfamily ATP binding cassette transporter permease protein
           [Sphingobacterium spiritivorum ATCC 33300]
 gi|300772122|ref|ZP_07081992.1| ABC superfamily ATP binding cassette transporter permease protein
           [Sphingobacterium spiritivorum ATCC 33861]
 gi|227244049|gb|EEI94064.1| ABC superfamily ATP binding cassette transporter permease protein
           [Sphingobacterium spiritivorum ATCC 33300]
 gi|300760425|gb|EFK57251.1| ABC superfamily ATP binding cassette transporter permease protein
           [Sphingobacterium spiritivorum ATCC 33861]
          Length = 244

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 76/129 (58%), Gaps = 17/129 (13%)

Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM--SIL-------QLRE 210
           M  +G+  + ++++IS   GAV+  Q AFQL          DL+  SI+        + E
Sbjct: 34  MTDIGLGSLGLIVIISTFIGAVMTMQIAFQLVS--------DLIPNSIIGQINRDSNILE 85

Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
           +G  ++A+++ G+ GS+I ++IGSM++ E+IDA+  MG++    LI P+I A I  +P L
Sbjct: 86  LGPTISALVLMGKVGSSISSQIGSMRVTEQIDALEIMGINAPGYLILPKILAGITMIPAL 145

Query: 271 TILANFSAI 279
            I+A F AI
Sbjct: 146 VIVAIFCAI 154


>gi|54023080|ref|YP_117322.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54014588|dbj|BAD55958.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 281

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 51/97 (52%)

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           I EEIDA+ TMG+  +  L+ PR+ A++I  PLL +L  F  ++    V     D+    
Sbjct: 141 IREEIDALHTMGISPIHRLVIPRMVAMLIVAPLLNVLVIFVGVLAGYAVAIGGQDVTPGS 200

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
           +++ F S  + A+++  L KA      + I+A + G 
Sbjct: 201 YWATFGSFTSTADVWVSLGKALIFGFLVVIIACQRGL 237


>gi|183984956|ref|YP_001853247.1| membrane protein YrbE4B [Mycobacterium marinum M]
 gi|183178282|gb|ACC43392.1| conserved hypothetical membrane protein YrbE4B [Mycobacterium
           marinum M]
          Length = 280

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 20/203 (9%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V   ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+ 
Sbjct: 69  VGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAG 128

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPLLT-------ILANFSAI 279
             A++G+M+++EEIDA+  M +  V  L+S R+ A L+  +PL +         A F+ +
Sbjct: 129 ATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLAVLAAFFAARFTTV 188

Query: 280 I--GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
              G S  ++ +Y          F++    +++    ++A  MA A+ +V    G+    
Sbjct: 189 FINGQSAGLYDHY----------FNTFLIPSDLLWSFLQAIVMAIAVMLVHTYYGYNASG 238

Query: 338 HSNSLGKKVTTCVVQSISIVIII 360
            S  +G  V   V  S+ +V++I
Sbjct: 239 GSVGVGIAVGQAVRTSLIVVVVI 261


>gi|118619253|ref|YP_907585.1| membrane protein YrbE4B [Mycobacterium ulcerans Agy99]
 gi|118571363|gb|ABL06114.1| conserved hypothetical membrane protein YrbE4B [Mycobacterium
           ulcerans Agy99]
          Length = 280

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 20/203 (9%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V   ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+ 
Sbjct: 69  VGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAG 128

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPLLT-------ILANFSAI 279
             A++G+M+++EEIDA+  M +  V  L+S R+ A L+  +PL +         A F+ +
Sbjct: 129 ATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLAVLAAFFAARFTTV 188

Query: 280 I--GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
              G S  ++ +Y          F++    +++    ++A  MA A+ +V    G+    
Sbjct: 189 FINGQSAGLYDHY----------FNTFLIPSDLLWSFLQAIVMAIAVMLVHTYYGYNASG 238

Query: 338 HSNSLGKKVTTCVVQSISIVIII 360
            S  +G  V   V  S+ +V++I
Sbjct: 239 GSVGVGIAVGQAVRTSLIVVVVI 261


>gi|313673540|ref|YP_004051651.1| hypothetical protein Calni_1580 [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312940296|gb|ADR19488.1| protein of unknown function DUF140 [Calditerrivibrio nitroreducens
           DSM 19672]
          Length = 258

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 1/78 (1%)

Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-L 263
           ++ +RE+   LTA++++ RS +A+ AEI  MK+  EI +I+  G+D    L  PRI+A +
Sbjct: 96  VVVIREVAPFLTALLLSLRSATAVGAEISMMKLGSEIRSIKIHGIDEYSYLFLPRIFAGM 155

Query: 264 IISLPLLTILANFSAIIG 281
           + S  L  I +  S  IG
Sbjct: 156 VCSFSLAVIFSAVSITIG 173


>gi|326383098|ref|ZP_08204787.1| hypothetical protein SCNU_09176 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326198234|gb|EGD55419.1| hypothetical protein SCNU_09176 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 283

 Score = 49.3 bits (116), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 87/169 (51%), Gaps = 6/169 (3%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V VV  ++  TG  IA QG   L+  G E  +    + + +R    ++  + +A   G+ 
Sbjct: 72  VVVVGFLTLFTGGTIAVQGYSSLANIGVEALTGFFSAFINVRIAVPVIAGIALAATIGAG 131

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL--LTILANFSAIIGASI 284
             A++G+M+++EEIDA+  M +  V  L+S RI A L+  +PL  L  LA+F A   A++
Sbjct: 132 ATAQLGAMRVSEEIDALEVMAISSVPYLVSTRIVAGLVAIIPLYSLAALASFLASRFATV 191

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
           V++      +  +FS F      ++I    ++A  MA A+ ++    GF
Sbjct: 192 VLYGQSSGVYDHYFSTFLIP---SDILWSFVQAICMAVAVMLIHTYYGF 237


>gi|296138973|ref|YP_003646216.1| hypothetical protein Tpau_1246 [Tsukamurella paurometabola DSM
           20162]
 gi|296027107|gb|ADG77877.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM
           20162]
          Length = 285

 Score = 49.3 bits (116), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 1/209 (0%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           +L +  Y +GV+  P  ILI+   G VI+ Q    + Q GA+  S     +  + +   +
Sbjct: 64  TLYQTWYMIGVTAFPG-ILIAIPFGIVISIQVGNIIHQLGADSLSGAAGGLAVIAQGAPI 122

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
            T +++AG   SAI A++G+  I EE DA+R MG++ +  L+ PR+ A  I  PLL +L 
Sbjct: 123 ATGLLLAGAGASAIAADLGARTIREETDAMRVMGINPINRLVVPRLLAAWIVSPLLNLLI 182

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
                I   +V      +    ++  F S A   +++  L+K+      I I+  + G  
Sbjct: 183 IGVGTIAGYLVAVGGQGVTPGAYWLSFGSFAHPIDVWISLVKSIIFGTIIAIIGCQRGLE 242

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
               S  +   V   VV S  ++  ++ L
Sbjct: 243 AKGGSRGVADGVNATVVLSFVVIFAVNLL 271


>gi|254458766|ref|ZP_05072190.1| ABC transporter permease protein [Campylobacterales bacterium GD 1]
 gi|207084532|gb|EDZ61820.1| ABC transporter permease protein [Campylobacterales bacterium GD 1]
          Length = 262

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 18/193 (9%)

Query: 156 LIRQMYYVGVSGVPVVILI-----SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210
           L +Q+Y+  V  +P+ + +     S + G VIA    + L     EI SI +  ++   E
Sbjct: 48  LTKQIYFTTVQIIPLFMTMAILFGSVIIGVVIALATQYNLQD---EIGSIIITFVID--E 102

Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
                TA++I+ RSG+A+  EI  M +N+E++ +    +D +  L  PRI + +IS   L
Sbjct: 103 FSPFFTALLISLRSGAAVNTEIAVMNVNKELNTLEKYKIDLIDYLFLPRIISGMISAVSL 162

Query: 271 TILANFSAIIGASIVIWK--YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328
           +IL  F+ I+ +S  I+   Y ++ F  +     S     ++   LIK    + A G V 
Sbjct: 163 SIL--FAVIMLSSGYIFTLFYMNMDFHTYKYILISAIEFKDLVVLLIK----SMAFGFVT 216

Query: 329 MKEGFAVGVHSNS 341
           M      G+ + S
Sbjct: 217 MLIPIYSGLKTTS 229


>gi|169628106|ref|YP_001701755.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169240073|emb|CAM61101.1| Putative YrbE family protein [Mycobacterium abscessus]
          Length = 285

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 62/101 (61%), Gaps = 1/101 (0%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V+I++  + G ++A +G   L   G    +  + S++  RE+  ++ A+  A ++G    
Sbjct: 76  VMIVLGVIAGGLVAIEGYNFLDLLGLGPATGIISSLVNTRELAPIMAAIAFATQAGCRFT 135

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIW-ALIISLPL 269
           A++G+M+I+EEIDA+ ++ +  +  L++ R+  A+++++PL
Sbjct: 136 AQLGAMRISEEIDAMDSIAIRPIPYLVTTRLMAAIVVTIPL 176


>gi|163786261|ref|ZP_02180709.1| hypothetical protein FBALC1_13787 [Flavobacteriales bacterium
           ALC-1]
 gi|159878121|gb|EDP72177.1| hypothetical protein FBALC1_13787 [Flavobacteriales bacterium
           ALC-1]
          Length = 245

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 62/116 (53%), Gaps = 2/116 (1%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTAVMIAGRSGSAI 228
           +V  I+F  G V+A Q +  ++      + +   +   +  E      ++++AG+ GS I
Sbjct: 45  IVAFIAFFVGGVVAIQTSLNINNPLIPKYLVGFATRQSIILEFAPTFISIIMAGKVGSFI 104

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
            + IG+M++ E+IDA+  MG++ +  L+ P+  AL +  P +  +A F  ++G  +
Sbjct: 105 TSSIGTMRVTEQIDALEVMGINAINYLVFPKFIALTL-YPFVISIAMFLGVLGGMV 159


>gi|145220617|ref|YP_001131295.1| hypothetical protein Mflv_0011 [Mycobacterium gilvum PYR-GCK]
 gi|145213103|gb|ABP42507.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
          Length = 285

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 64/110 (58%), Gaps = 3/110 (2%)

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G +GV +V+ I+   GA++  +G   L   G    +  + S++  RE+  +  ++  A +
Sbjct: 72  GTAGVAIVLGIT--VGALVGIEGYNFLDMLGLGPATGIISSLVNTRELAPIAASLAFATQ 129

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTI 272
           +G    A++GSM+I EEIDA+ ++G+  +  L++ R+ A +I+ +PL  +
Sbjct: 130 AGCRFTAQLGSMRIAEEIDALESLGIRPIPYLVTTRLMASVIAVIPLYVV 179


>gi|219559567|ref|ZP_03538643.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis T17]
 gi|260202679|ref|ZP_05770170.1| hypothetical protein MtubT4_21963 [Mycobacterium tuberculosis T46]
 gi|289445097|ref|ZP_06434841.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           T46]
 gi|289571733|ref|ZP_06451960.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           T17]
 gi|289418016|gb|EFD15256.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           T46]
 gi|289545487|gb|EFD49135.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           T17]
          Length = 280

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 63/114 (55%), Gaps = 3/114 (2%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V   ++  +G VIA QG   L   G E     L + L +R +  ++  + +A   G+ 
Sbjct: 69  VGVAAFLTLASGGVIAVQGYSSLGDIGIEALIGFLSAFLNVRVVAPVIAGIALAATIGAG 128

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL--LTILANFSA 278
             A++G+M+++EEIDA+  M +  V  L+S R+ A L+  +PL  L++LA F A
Sbjct: 129 ATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFA 182


>gi|296171120|ref|ZP_06852573.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295894376|gb|EFG74129.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 284

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 61/106 (57%), Gaps = 1/106 (0%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V +V  ++  TGAVIA QG  QLS  G E  +  + + + +R I   +  V +A   G+ 
Sbjct: 73  VVIVGFLTLSTGAVIAVQGYNQLSGIGVEAMTGFISAYVNVRIISPAVAGVGLAATIGAG 132

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPLLTI 272
             A++G+M+I +EIDA+  M +  V  L+S R+ A +++ +PL  +
Sbjct: 133 ATAQLGAMRIADEIDALEVMAVRSVAYLVSTRVAAGVVVVIPLYCV 178


>gi|15828392|ref|NP_302655.1| hypothetical protein ML2588 [Mycobacterium leprae TN]
 gi|221230869|ref|YP_002504285.1| hypothetical protein MLBr_02588 [Mycobacterium leprae Br4923]
 gi|13093822|emb|CAC32120.1| conserved membrane protein [Mycobacterium leprae]
 gi|219933976|emb|CAR72688.1| conserved membrane protein [Mycobacterium leprae Br4923]
          Length = 289

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 93/181 (51%), Gaps = 13/181 (7%)

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
           R+ F  +  NL+ + G    + I+D   Q    GL+    G    +  +++   L LI Q
Sbjct: 8   RARFPRAAANLNRY-GGAAARGIDD-IGQMSWFGLI--ALGNIPNALSRYRKETLRLIAQ 63

Query: 160 MYYVGVSGVPVV----ILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           +  +G   + VV     ++ FVT    +++A QG   L   G E F+    +++ +R   
Sbjct: 64  IG-MGTGAMAVVGGTAAIVGFVTLSGSSLVAIQGFASLGAIGVEAFTGFFAALINVRIAA 122

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPLLT 271
            ++T +++A   G+   AE+G+M+I+EEIDA+  M +  +  L++ RI A L++ +PL  
Sbjct: 123 PVITGIVMAATVGAGATAELGAMRISEEIDALEVMSIKSISFLVTTRILAGLVVIVPLYA 182

Query: 272 I 272
           +
Sbjct: 183 V 183


>gi|120401973|ref|YP_951802.1| hypothetical protein Mvan_0958 [Mycobacterium vanbaalenii PYR-1]
 gi|119954791|gb|ABM11796.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 285

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 63/107 (58%), Gaps = 3/107 (2%)

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G +GV VV+ I+   GA++  +G   L   G    +  + S++  RE+  +  ++  A +
Sbjct: 72  GTAGVAVVLGIT--VGALVGIEGYNFLDLLGLGPATGIISSLVNTRELAPIAASLAFATQ 129

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPL 269
           +G    A++GSM+I EEIDA+ ++G+  +  L++ R+ A +++ +PL
Sbjct: 130 AGCRFTAQLGSMRIAEEIDALESLGIRPIPYLVTTRLMASVVAVIPL 176


>gi|317508867|ref|ZP_07966506.1| hypothetical protein HMPREF9336_02878 [Segniliparus rugosus ATCC
           BAA-974]
 gi|316252828|gb|EFV12259.1| hypothetical protein HMPREF9336_02878 [Segniliparus rugosus ATCC
           BAA-974]
          Length = 315

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI-IGASI 284
           SA+  ++G+  I EEIDA+  MG++ VR L+SPR+ A++   PLL +   F  +  G  I
Sbjct: 164 SAVATDLGARSIREEIDAMLVMGINPVRRLVSPRLAAILFVAPLLCVFIIFMGLAAGYVI 223

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
            I      P + + + F + A + ++   LIK+        ++A + G 
Sbjct: 224 AIVGMSGTPGS-YIASFSAFARVEDMAVALIKSLLFGVVAILIACQRGL 271


>gi|54023081|ref|YP_117323.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54014589|dbj|BAD55959.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 288

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 57/105 (54%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           R    VG   VP+++++  V GA +  +    L   G    +  + +    RE+  +  A
Sbjct: 67  RGSIVVGGGTVPMMVVLGLVMGASVGVESFATLDMLGMGPVTGIVSAYATTRELAPIAAA 126

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
           V  A ++G  I AEIGSM+I+EEIDAI ++GL  V  +++ R+ A
Sbjct: 127 VGFAAQAGCRITAEIGSMRISEEIDAIESLGLRSVPFVVTTRVIA 171


>gi|254822927|ref|ZP_05227928.1| hypothetical protein MintA_23569 [Mycobacterium intracellulare ATCC
           13950]
          Length = 289

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 92/180 (51%), Gaps = 17/180 (9%)

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
           RS F  + +NL+ + G    + ++D    A   G+ +++        +  + +    +R 
Sbjct: 8   RSRFPRAAENLNRY-GLAAARGLDDIGQMAWFGGVALAHI------PHALRNYRKETLRL 60

Query: 160 MYYVGV-SGVPVVI-----LISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210
           +  +G+ +G   VI     ++ FVT    +++A QG   L   G E F+    +++ +R 
Sbjct: 61  VAQIGMGTGAMAVIGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120

Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL 269
              ++T + +A   G+   AE+G+M+I+EEIDA+  MG+  +  L + RI A L++ +PL
Sbjct: 121 AAPVVTGIAMAATVGAGATAELGAMRISEEIDALEVMGIKSISFLATTRIMAGLVVIIPL 180


>gi|41409701|ref|NP_962537.1| hypothetical protein MAP3603 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41398533|gb|AAS06153.1| hypothetical protein MAP_3603 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 251

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 60/103 (58%), Gaps = 4/103 (3%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V ++ FVT    +++A QG   L   G E F+    +++ +R    ++T + +A   G+ 
Sbjct: 40  VAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAAPVVTGIAMAATVGAG 99

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL 269
             AE+G+M+I+EEIDA+  MG+  +  L + RI A L++ +PL
Sbjct: 100 ATAELGAMRISEEIDALEVMGIKSISFLATTRIMAGLVVIIPL 142


>gi|300789440|ref|YP_003769731.1| ABC transporter permease [Amycolatopsis mediterranei U32]
 gi|299798954|gb|ADJ49329.1| ABC transport system permease protein [Amycolatopsis mediterranei
           U32]
          Length = 271

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 1/96 (1%)

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG  +  QG   L+Q      +  L +    REI  L+  + ++   GS   A++G+M+I
Sbjct: 70  TGVTVGLQGFSALNQINISAMTGFLTAYFNTREIAPLVAGLALSSTVGSGFTAQLGAMRI 129

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTI 272
           +EEIDA+  M +  +  L++ RI A  I+ +PL  I
Sbjct: 130 SEEIDALEVMAVRSMPYLVTTRIVAGFIAIIPLYVI 165


>gi|224369539|ref|YP_002603703.1| ABC-type transport system involved in resitance to organic
           solvents, permease protein [Desulfobacterium
           autotrophicum HRM2]
 gi|223692256|gb|ACN15539.1| ABC-type transport system involved in resitance to organic
           solvents, permease protein [Desulfobacterium
           autotrophicum HRM2]
          Length = 278

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 62/116 (53%)

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           RQ+   G+  +  V L++   G ++  Q    L + G   +   L  ++ +RE+  LLT 
Sbjct: 64  RQLLETGIKTIIPVGLVALFIGVLVVMQAQLWLGKLGQTEWLGPLFVVVVVRELAPLLTN 123

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           +++  ++GS + +E+  M ++ ++  +   G+D +  LI PR+ A ++S   LT+L
Sbjct: 124 LIMILQNGSKMTSELAGMTVSGKVRMLDAQGIDPLIYLILPRVTATVVSTFCLTLL 179


>gi|317508277|ref|ZP_07965957.1| hypothetical protein HMPREF9336_02329 [Segniliparus rugosus ATCC
           BAA-974]
 gi|316253452|gb|EFV12842.1| hypothetical protein HMPREF9336_02329 [Segniliparus rugosus ATCC
           BAA-974]
          Length = 280

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 62/121 (51%)

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           ++G+  I EEIDA+R +G++  + L++PR+ A++   P+L +   F  +    ++   + 
Sbjct: 134 DLGARTIREEIDAMRVIGINPTQRLVAPRLAAMLFVSPMLCVFIVFITMTAGYLLAVMFQ 193

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
           D+    + + F + A L++I+  + K+ F    + IVA + G         + + V   V
Sbjct: 194 DVTPGSYLASFGAFAKLSDIYVAIGKSVFFGIVVVIVACQRGLETKFGPRGVAESVNASV 253

Query: 351 V 351
           V
Sbjct: 254 V 254


>gi|169631108|ref|YP_001704757.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169243075|emb|CAM64103.1| Putative YrbE family protein [Mycobacterium abscessus]
          Length = 292

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 47/73 (64%), Gaps = 3/73 (4%)

Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA---LII 265
           RE+  ++ A+  A ++G  + AEIG+M+I+EEIDA+   G+  +  +++ R+ A   +I+
Sbjct: 122 REMAPMIAAIGFAAQAGCRMTAEIGAMRISEEIDALEAQGIRSIPFVVTTRVIAGIIIIV 181

Query: 266 SLPLLTILANFSA 278
            L +LT+L  + +
Sbjct: 182 PLYVLTLLLAYGS 194


>gi|332043098|gb|EGI79296.1| protein of unknown function DUF140 [Lacinutrix algicola 5H-3-7-4]
          Length = 245

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 59/114 (51%), Gaps = 2/114 (1%)

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTAVMIAGRSGSAI 228
           +V  I+F  G VI  Q A  +       + +   +   +  E      ++++AG+ GS I
Sbjct: 45  IVAFIAFFVGGVITIQTALNIDNPLIPKYLVGFATRQSIILEFAPTFISIIMAGKVGSFI 104

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
            + IG+M++ E+IDA+  MG++ +  L+ P+  A+++  P +  +A F  I G 
Sbjct: 105 TSSIGTMRVTEQIDALEVMGINSINYLVFPKFVAMML-YPFVISIAMFLGIFGG 157


>gi|296167381|ref|ZP_06849783.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295897325|gb|EFG76929.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 289

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 60/103 (58%), Gaps = 4/103 (3%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V ++ FVT    +++A QG   L   G E F+    +++ +R    ++T + +A   G+ 
Sbjct: 78  VAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAAPVVTGIAMAATVGAG 137

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL 269
             AE+G+M+I+EEIDA+  MG+  +  L + RI A L++ +PL
Sbjct: 138 ATAELGAMRISEEIDALEVMGIKSISFLATTRIMAGLVVIIPL 180


>gi|251773083|gb|EES53637.1| probable ABC transporter, permease [Leptospirillum
           ferrodiazotrophum]
          Length = 146

 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 52/90 (57%), Gaps = 1/90 (1%)

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           E+G M   ++I+A+  MG+D V  L++P+I A ++ LP+L+++ +F  ++    V     
Sbjct: 1   ELGMMSTTQQIEALLVMGVDPVDRLVAPKILAGMVMLPVLSVVGDFLGVLAGLAVAMFGA 60

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFM 320
            +   +++S   +  T  N+  G++K PF+
Sbjct: 61  HVAAPLYWSGVRTALTPPNLVNGIVK-PFV 89


>gi|58040452|ref|YP_192416.1| ABC transporter permease [Gluconobacter oxydans 621H]
 gi|58002866|gb|AAW61760.1| Putative ABC transport system permease protein [Gluconobacter
           oxydans 621H]
          Length = 274

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 17/186 (9%)

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
           G+   ++ + +TG  I  Q  + L   G    +  ++S + +REI  +L  V++ GRSG 
Sbjct: 70  GILSTLVTAALTGFGIVAQTVYWLGFAGMAQMTGSILSTVLVREIAPVLVGVILLGRSGM 129

Query: 227 AIVAEIGSMKINEEIDAIRTMGLD-FVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
            ++ E+G++    ++ A+  MG+D F+  L+ PR  A+ IS   L ++ + +A++     
Sbjct: 130 LMLTELGTLTTGGQMRAMTGMGIDPFISFLL-PRSLAMTISGFTLGVIFSMTALL-VGYA 187

Query: 286 IWKYYD---IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
           + +  D   +P   F  +  S+    + F  +I A F+           G+AVGV S   
Sbjct: 188 VCRVEDAITMPIWAFLDQVVSSVKPIDYF--VIPAKFIF---------SGYAVGVCSCLS 236

Query: 343 GKKVTT 348
           G  VTT
Sbjct: 237 GMDVTT 242


>gi|254776984|ref|ZP_05218500.1| hypothetical protein MaviaA2_20266 [Mycobacterium avium subsp.
           avium ATCC 25291]
          Length = 292

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 4/106 (3%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V +I FVT   G++IA QG   L   G E F+    ++   R    ++  V +A   G+ 
Sbjct: 81  VAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRIAAPIVAGVTLAATVGAG 140

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRI-WALIISLPLLTI 272
             A++G+M+I+EEIDA+  MG+  +  L+S RI   L + +PL  +
Sbjct: 141 ATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLAVIVPLYAL 186


>gi|262202880|ref|YP_003274088.1| hypothetical protein Gbro_2987 [Gordonia bronchialis DSM 43247]
 gi|262086227|gb|ACY22195.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247]
          Length = 288

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA +  +    L+  G    +  L +    REI  LL A     +SG    A++GSM+I 
Sbjct: 88  GATVGIEAYTALNLLGMAPVTGGLSAFATTREIAPLLAATAFTAQSGCRFTAQLGSMRIA 147

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISL-PL--LTILANFSA 278
           EEIDA+  + +  +  L++ R+ A ++++ PL  +++ AN+ A
Sbjct: 148 EEIDALEAIAIRPLPYLVTTRMLAAVLAIVPLYSVSLAANYIA 190


>gi|312137896|ref|YP_004005232.1| integral membrane protein yrbe1b [Rhodococcus equi 103S]
 gi|325673337|ref|ZP_08153029.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Rhodococcus equi ATCC 33707]
 gi|311887235|emb|CBH46544.1| putative integral membrane protein YrbE1B [Rhodococcus equi 103S]
 gi|325555927|gb|EGD25597.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Rhodococcus equi ATCC 33707]
          Length = 285

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 89/185 (48%), Gaps = 13/185 (7%)

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q+G   L   G    S  L +I   RE+  ++ A+ +A + G+   A++G+M+I++EIDA
Sbjct: 92  QRG---LELVGMTTLSGMLSAIANTRELAPVVVAIALAAKVGTGFTAQLGAMRISDEIDA 148

Query: 244 IRTMGLDFVRILISPRIW-ALIISLPLLTI--LANF--SAIIGASIVIWKYYDIPFAVFF 298
           + +MG+  +  L   R+  A++  LP+  I  LA++  + ++   IV+W         +F
Sbjct: 149 LDSMGVRSIPFLAGTRVLAAMVCVLPIFMIGLLASYLSTRLV---IVVWGGASAGTYDYF 205

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
             FH   +  ++    IKA   A  + +V    G+        +G+     +  +I  + 
Sbjct: 206 --FHLALSPVDLVYAAIKAIVFAGVVALVHCSYGYFASGGPAGVGQAAGRALRTAILAIG 263

Query: 359 IIDSL 363
           ++D L
Sbjct: 264 VLDVL 268


>gi|240170712|ref|ZP_04749371.1| hypothetical protein MkanA1_15460 [Mycobacterium kansasii ATCC
           12478]
          Length = 284

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 64/118 (54%), Gaps = 6/118 (5%)

Query: 148 KFKGFLLSLIRQMYY----VGVSGVPVVIL--ISFVTGAVIAQQGAFQLSQFGAEIFSID 201
           ++   +L LI QM      + V G  VVI+  ++  TGAVIA QG  QLS  G E  +  
Sbjct: 47  RYGKEILRLIAQMSLGTGALAVIGGTVVIVGFLTLSTGAVIAVQGYNQLSGIGVEAMTGF 106

Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
           + + + +R I   +  V +A   G+   A++G+M+I EEIDA+  M +  V  L+S R
Sbjct: 107 ISAYVNVRIISPAVAGVGLAATIGAGATAQLGAMRIAEEIDALEVMAVRSVAYLVSTR 164


>gi|41410181|ref|NP_963017.1| hypothetical protein MAP4083 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41399015|gb|AAS06633.1| hypothetical protein MAP_4083 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 292

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 4/106 (3%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V +I FVT   G++IA QG   L   G E F+    ++   R    ++  V +A   G+ 
Sbjct: 81  VAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRIAAPIVAGVTLAATVGAG 140

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRI-WALIISLPLLTI 272
             A++G+M+I+EEIDA+  MG+  +  L+S RI   L + +PL  +
Sbjct: 141 ATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLAVIVPLYAL 186


>gi|118467306|ref|YP_883683.1| hypothetical protein MAV_4552 [Mycobacterium avium 104]
 gi|118168593|gb|ABK69490.1| conserved hypothetical protein [Mycobacterium avium 104]
          Length = 292

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 4/106 (3%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V +I FVT   G++IA QG   L   G E F+    ++   R    ++  V +A   G+ 
Sbjct: 81  VAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRIAAPIVAGVTLAATVGAG 140

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRI-WALIISLPLLTI 272
             A++G+M+I+EEIDA+  MG+  +  L+S RI   L + +PL  +
Sbjct: 141 ATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLAVIVPLYAL 186


>gi|326383822|ref|ZP_08205507.1| hypothetical protein SCNU_12842 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326197586|gb|EGD54775.1| hypothetical protein SCNU_12842 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 286

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 78/163 (47%), Gaps = 6/163 (3%)

Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR-I 260
           L +I   RE+  ++ A+ +A + G+   A+IG+M+I++EI A+  M +  V  L + R I
Sbjct: 108 LAAIANTRELAPVVVAIALAAKVGTGFTAQIGAMRISDEIAALDAMAIRSVPFLATTRMI 167

Query: 261 WALIISLP--LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318
            A++  LP  ++ +LA++ A     +V+W Y+      +   FH   T  ++     KA 
Sbjct: 168 AAMVCVLPIYMVGLLASYVAT--RLVVVW-YHGESSGTYDYFFHLALTPTDLLYSATKAV 224

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
             A  + +V    G+        +G+     +  SI  + + D
Sbjct: 225 VFAAIVTLVHCSYGYFASGGPEGVGQAAGRALRTSILSIGVFD 267


>gi|118467026|ref|YP_884172.1| ABC transporter transmembrane protein [Mycobacterium avium 104]
 gi|118168313|gb|ABK69210.1| ABC transporter integral membrane protein [Mycobacterium avium 104]
          Length = 235

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 102/199 (51%), Gaps = 5/199 (2%)

Query: 165 VSGVPVVIL-ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           V+ +P V++ I F  GA++A Q +  +++ GA         +  LR+   +   +++ G 
Sbjct: 24  VTALPAVLMAIPF--GAMVAVQLSGLVNEVGANSLVGSATGVAVLRQGAPVTAGLLMGGA 81

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           + SAI ++ G+  I EE+DA++T+G+D VR L+ PR   L++  P L ++   +  +GA+
Sbjct: 82  AASAIASDFGARAIREELDALKTLGIDPVRRLVVPRFLGLLLITPSLVVIV-IAMGVGAA 140

Query: 284 IVIWKYYD-IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
            VI    + +    F+  F S A + +++  + K    A  + +++ + G         +
Sbjct: 141 FVIATVVNGVTPGSFWLSFGSFAKMVDLWFTMGKGFIFAGIVAVISSQRGMEAKGGPRGV 200

Query: 343 GKKVTTCVVQSISIVIIID 361
              V   VV ++  +++++
Sbjct: 201 ADAVNASVVLNVIFIVVVN 219


>gi|183983838|ref|YP_001852129.1| integral ABC-type transport protein [Mycobacterium marinum M]
 gi|183177164|gb|ACC42274.1| conserved hypothetical integral ABC-type transport protein
           [Mycobacterium marinum M]
          Length = 287

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 61/107 (57%), Gaps = 3/107 (2%)

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G +GV VV+      GA++  +G   L   G    +  + S++  RE+  L+ ++  A +
Sbjct: 74  GTAGVAVVL--GMTVGALLGIEGYNFLDLLGLGPATGLISSLVNTRELAPLMASLAFAMQ 131

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PL 269
           +G    A++GSM+I EEIDA+ ++ +  +  L++ R+ A I+++ PL
Sbjct: 132 AGCRFTAQLGSMRIAEEIDAMESIAIRPIPFLVTTRLVASIVAMIPL 178


>gi|145221307|ref|YP_001131985.1| hypothetical protein Mflv_0712 [Mycobacterium gilvum PYR-GCK]
 gi|315441805|ref|YP_004074684.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|145213793|gb|ABP43197.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
 gi|315260108|gb|ADT96849.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 290

 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 86/165 (52%), Gaps = 21/165 (12%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV----ILISFVT---G 179
           S  H+   V++  G    +   ++  +L LI ++  +G   + VV     ++ FVT    
Sbjct: 32  SIGHVAWFVVTAVGSIGHAVRYYRKEMLRLIAEIG-MGTGAMAVVGGTVAIVGFVTLSGS 90

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS-----GSAIVAEIGS 234
           +++A QG   L   G E F+    +++ +R     + A ++AG++     G+   AE+G+
Sbjct: 91  SLVAIQGFASLGNIGVEAFTGFFAALINVR-----IAAPVVAGQALAATVGAGATAELGA 145

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWA---LIISLPLLTILANF 276
           M+I+EEIDA+  MG+  +  L+S RI A   +II L  + I+ +F
Sbjct: 146 MRISEEIDALEVMGIKSISYLVSTRIVAGFVVIIPLYAMAIIMSF 190


>gi|240168188|ref|ZP_04746847.1| hypothetical protein MkanA1_02657 [Mycobacterium kansasii ATCC
           12478]
          Length = 272

 Score = 46.2 bits (108), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 4/101 (3%)

Query: 173 LISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ FVT    +++A QG   L   G E F+    +++ +R    ++T V +A   G+   
Sbjct: 63  IVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAAPVVTGVAMAATVGAGAT 122

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL 269
           AE+G+M+I+EEIDA+  MG+  V  L + RI A L + +PL
Sbjct: 123 AELGAMRISEEIDALEVMGIKSVCFLATTRILAGLTVIIPL 163


>gi|296089608|emb|CBI39427.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score = 46.2 bits (108), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 16/140 (11%)

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
            ++E+ D +R +G + V  L++PR+ A  I+LP LT+L     +  ++++    Y I   
Sbjct: 185 PVSEQTDTLRVLGTNPVDYLVTPRVIASCIALPFLTLLCFTVGMASSALLADSVYGISIN 244

Query: 296 VFFSRFHSTATLANIFTGLIKA-------PFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
           +            +I + +IK+         ++CA G+  M  G A GV     G+  T+
Sbjct: 245 IILDSAQRALNSWDIISAMIKSVAFGGIISTVSCAWGVTTM--GGAKGV-----GESTTS 297

Query: 349 CVVQSISIVIIIDSLFAIFY 368
            VV S+  + I D  FA+ Y
Sbjct: 298 AVVISLVGIFIAD--FALSY 315


>gi|254819937|ref|ZP_05224938.1| TrnB2 protein [Mycobacterium intracellulare ATCC 13950]
          Length = 282

 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 6/197 (3%)

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TGA I  Q    LS  G E  S    + L  R    L +A+ +A   G+   A++G+M+I
Sbjct: 81  TGAFIGIQLYRSLSDVGVEALSGFASAYLNTRFAAPLTSAIGLAATIGAGATAQLGAMRI 140

Query: 238 NEEIDAIRTMGLDFVRILISPRIWA-LIISLPL--LTILANFSAIIGASIVIWKYYDIPF 294
           NEEIDA+  MG+  +  L S RI A +++++PL  L+ LA + A    ++V+  +   P 
Sbjct: 141 NEEIDALEVMGIRAISYLASTRIVAGVLVTVPLWCLSSLAGYLAT--RTLVVVAFGQAP- 197

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            V+   F++     ++   L++    A  + +V    GF        +G+ V   V  S+
Sbjct: 198 GVYDHYFNTYLQPTDLIWSLLQVIATATVVMLVHTYYGFNATGGPAGVGEAVGRSVRASL 257

Query: 355 SIVIIIDSLFAIFYFAI 371
            + + +    A+  + +
Sbjct: 258 VVAVTVQLAVAMAAYGV 274


>gi|326331673|ref|ZP_08197961.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
 gi|325950472|gb|EGD42524.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
          Length = 273

 Score = 45.8 bits (107), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 53/93 (56%)

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
           IL++   G V + Q     +  GA  FS  +  +  LR+   L+T+++IA   GSAI ++
Sbjct: 68  ILVAIPFGVVTSIQVGAVANSIGASSFSGAVNGVGVLRQAAPLVTSLIIACVVGSAICSD 127

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264
           +G   I +EI A+  MG + V+ +++PRI A +
Sbjct: 128 LGMRAIRDEIAALEVMGTNPVQRMVAPRIVAAV 160


>gi|120401161|ref|YP_950990.1| hypothetical protein Mvan_0133 [Mycobacterium vanbaalenii PYR-1]
 gi|119953979|gb|ABM10984.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 289

 Score = 45.8 bits (107), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 16/117 (13%)

Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS--- 224
           V ++ FVT    +++A QG   L   G E F+    +++ +R     + A ++AG++   
Sbjct: 78  VAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVR-----IAAPVVAGQALAA 132

Query: 225 --GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA---LIISLPLLTILANF 276
             G+   AE+G+M+I+EEIDA+  MG+  +  L+S RI A   +II L  + I+ +F
Sbjct: 133 TVGAGATAELGAMRISEEIDALEVMGIKSISYLVSTRIMAGFVVIIPLYAMAIIMSF 189


>gi|296165200|ref|ZP_06847747.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295899389|gb|EFG78848.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 287

 Score = 45.4 bits (106), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 63/107 (58%), Gaps = 3/107 (2%)

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G +GV VV+ ++   GA++  +G   L+  G    +  + S++  RE+  L+ ++  A +
Sbjct: 74  GTAGVAVVLGVT--VGALVGIEGYNFLNLLGLGPATGFVSSLVNTRELAPLMASLAFAMQ 131

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PL 269
            G    A++GSM+I EEIDA+ ++ +  +  L++ R+ A ++++ PL
Sbjct: 132 GGCRFTAQLGSMRIAEEIDAMESIAIRPIPYLVTTRLIASVVAIVPL 178


>gi|118469400|ref|YP_885536.1| ABC transporter transmembrane protein [Mycobacterium smegmatis str.
           MC2 155]
 gi|118170687|gb|ABK71583.1| ABC-transporter integral membrane protein [Mycobacterium smegmatis
           str. MC2 155]
          Length = 285

 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 62/107 (57%), Gaps = 3/107 (2%)

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G +GV VV+ I+   GA++  +G   L   G    +  + S++  RE+  +  ++  A +
Sbjct: 72  GTAGVAVVLGIT--VGALVGIEGYNFLDLLGLGPATGIISSLVNTRELAPIAASLAFATQ 129

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPL 269
           +G    A++GSM+I EEIDA+ ++ +  +  L++ R+ A +++ +PL
Sbjct: 130 AGCRFTAQLGSMRIAEEIDALDSIAIRPIPYLVTTRLMAAVVAVIPL 176


>gi|41407948|ref|NP_960784.1| hypothetical protein MAP1850 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|118466872|ref|YP_881589.1| ABC-transporter integral membrane protein [Mycobacterium avium 104]
 gi|254775058|ref|ZP_05216574.1| ABC-transporter integral membrane protein [Mycobacterium avium
           subsp. avium ATCC 25291]
 gi|41396302|gb|AAS04167.1| hypothetical protein MAP_1850 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|118168159|gb|ABK69056.1| ABC-transporter integral membrane protein [Mycobacterium avium 104]
          Length = 287

 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 60/107 (56%), Gaps = 3/107 (2%)

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G +GV VV+      GA++  +G   L   G    +  + S++  RE+  L+ ++  A +
Sbjct: 74  GTAGVAVVL--GMTVGALVGIEGYNFLDLLGLGPATGFVSSLVNTRELAPLMASLAFAMQ 131

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PL 269
            G    A++GSM+I EEIDA+ ++ +  +  L++ R+ A ++++ PL
Sbjct: 132 GGCRFTAQLGSMRIAEEIDAMESIAIRPIPYLVTTRLIASVVAIVPL 178


>gi|120401935|ref|YP_951764.1| hypothetical protein Mvan_0920 [Mycobacterium vanbaalenii PYR-1]
 gi|119954753|gb|ABM11758.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 255

 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 67/111 (60%), Gaps = 4/111 (3%)

Query: 157 IRQMYYVG-VSGVPVVIL-ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           I QM++V  VS  P V+L I F   +V        L +FGA  FS    +   + +IG L
Sbjct: 39  IFQMWFVARVSIFPTVMLSIPFTVLSVFIFN--ILLVEFGAADFSGAGAAFGAVTQIGPL 96

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
           +T +++AG + +A+ A++G+  I EE+DA+R MG++ ++ L+ PR+ A ++
Sbjct: 97  VTVLVVAGAAATAMCADLGARTIREELDAMRVMGINPLQALVVPRVLATVV 147


>gi|254819658|ref|ZP_05224659.1| ABC-transporter integral membrane protein [Mycobacterium
           intracellulare ATCC 13950]
          Length = 281

 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 60/107 (56%), Gaps = 3/107 (2%)

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G +GV VV+      GA++  +G   L   G    +  + S++  RE+  L+ ++  A +
Sbjct: 68  GTAGVAVVL--GMTVGALVGIEGYNFLDLLGLGPATGFVSSLVNTRELAPLMASLAFAMQ 125

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPL 269
            G    A++GSM+I EEIDA+ ++ +  +  L++ R+ A +++ +PL
Sbjct: 126 GGCRFTAQLGSMRIAEEIDALESIAIRPIPYLVTTRLIASVVAIIPL 172


>gi|209545500|ref|YP_002277729.1| hypothetical protein Gdia_3388 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209533177|gb|ACI53114.1| protein of unknown function DUF140 [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 296

 Score = 45.1 bits (105), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 2/102 (1%)

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFG-AEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
            GV   +  + + G  +  Q A+ L   G A++    L+S+L +REI  +L  +++ GRS
Sbjct: 93  GGVLSTLFTATLAGLTVVSQAAYWLGFAGMAQMTGSILVSVL-VREIAPVLVGIILLGRS 151

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
           G   + EIG + +  ++ A++  GLD   +L+ PR +A  + 
Sbjct: 152 GMLTLTEIGMLTLGGQVRAMQAQGLDPFLLLVMPRTFAFTVG 193


>gi|118466059|ref|YP_881723.1| TrnB2 protein [Mycobacterium avium 104]
 gi|118167346|gb|ABK68243.1| TrnB2 protein [Mycobacterium avium 104]
          Length = 294

 Score = 45.1 bits (105), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 94/197 (47%), Gaps = 6/197 (3%)

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG+ I  Q    LS  G E  S    + L  R    L +A+ +A   G+   A++G+M+I
Sbjct: 93  TGSFIGIQLYRSLSDVGVEALSGFASAYLNTRFAAPLTSAIGLAATIGAGATAQLGAMRI 152

Query: 238 NEEIDAIRTMGLDFVRILISPRIWA-LIISLPL--LTILANFSAIIGASIVIWKYYDIPF 294
           NEEIDA+  MG+  +  L S RI A +++++PL  L+ LA + A    ++V+  +   P 
Sbjct: 153 NEEIDALEVMGIRAISYLASTRIVAGVLVTVPLWCLSSLAGYLAT--RTLVVVAFGQAP- 209

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            V+   F++     ++   L++    A  + +V    GF        +G+ V   V  S+
Sbjct: 210 GVYDHYFNTYLQPTDLIWSLLQVMATATVVMLVHTYYGFNATGGPAGVGEAVGRSVRASL 269

Query: 355 SIVIIIDSLFAIFYFAI 371
            + + +    A+  + +
Sbjct: 270 VVAVTVQLAVAMAAYGV 286


>gi|254488593|ref|ZP_05101798.1| membrane protein [Roseobacter sp. GAI101]
 gi|214045462|gb|EEB86100.1| membrane protein [Roseobacter sp. GAI101]
          Length = 254

 Score = 45.1 bits (105), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 10/117 (8%)

Query: 153 LLSLIRQMYYVGVSG----------VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDL 202
           L+ + R  +Y G  G          +PVV L +  TG  +  Q     ++F AE     +
Sbjct: 26  LVHIFRPPFYAGQFGTALVQIGWLSLPVVGLTALFTGGALVMQIYAGGARFNAEAVVPQI 85

Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
           ++I  +RE+G +L  +M+A R  +AI AEI +MK+ E++DA+ T+  D +R L  PR
Sbjct: 86  VAIGMVRELGPVLVGLMVAARVTAAIAAEIATMKVTEQLDALITLSTDPMRYLTVPR 142


>gi|162148733|ref|YP_001603194.1| putative ABC transport system permease [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161787310|emb|CAP56904.1| putative ABC transport system permease protein [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 296

 Score = 45.1 bits (105), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 2/102 (1%)

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFG-AEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
            GV   +  + + G  +  Q A+ L   G A++    L+S+L +REI  +L  +++ GRS
Sbjct: 93  GGVLSTLFTATLAGLTVVSQAAYWLGFAGMAQMTGSILVSVL-VREIAPVLVGIILLGRS 151

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
           G   + EIG + +  ++ A++  GLD   +L+ PR +A  + 
Sbjct: 152 GMLTLTEIGMLTLGGQVRAMQAQGLDPFLLLVMPRTFAFTVG 193


>gi|311743966|ref|ZP_07717772.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Aeromicrobium marinum DSM 15272]
 gi|311313096|gb|EFQ83007.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Aeromicrobium marinum DSM 15272]
          Length = 275

 Score = 44.7 bits (104), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 33/167 (19%), Positives = 84/167 (50%)

Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263
           +++  RE+  L+ A+ +A + G    A++GSM+ +EEIDA+  M +  +  L++ R+ A 
Sbjct: 100 AVVNTRELAPLVAALALAAQVGCRFTAQLGSMRTSEEIDALSVMAVPAIPYLVTTRLIAS 159

Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323
           ++++  L ++    + + + + +   +  P   +   F +   L +I   ++K    A A
Sbjct: 160 MLAILPLYMIGLVGSYLASQLAVTVLFGQPVGTYQHYFGTFIALEDIALSIVKVLVFAFA 219

Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           + ++    GF     +  +G+     +  SI +V++++ +  + ++ 
Sbjct: 220 VTLIHCWYGFMASGGAEGVGEATGRAIRASIVVVVLLNMILTLVFWG 266


>gi|54027027|ref|YP_121269.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54018535|dbj|BAD59905.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 287

 Score = 44.7 bits (104), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 13/153 (8%)

Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL- 267
           RE+  +L  +  A ++G    A++GSM+I+EEIDA+ ++ +  +  L+S R+ A  +++ 
Sbjct: 117 RELAPILATLAFAIQAGCRFTAQLGSMRISEEIDALESIAIRPLPYLVSTRMIAATLTIV 176

Query: 268 PLLTI------LANFSAII---GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318
           PL TI      LA   +++   G S   + +Y   F +    F S   L  +   ++ A 
Sbjct: 177 PLYTIGLATAYLATKLSVLFLGGTSAGTYDHYFFQFLIGTDVFFS---LLKVVIFVLLAT 233

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
           F+ C  G VA      VGV +    K V   +V
Sbjct: 234 FIQCYYGYVATGGPEGVGVAAGRAIKMVIVVMV 266


>gi|262201470|ref|YP_003272678.1| hypothetical protein Gbro_1508 [Gordonia bronchialis DSM 43247]
 gi|262084817|gb|ACY20785.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247]
          Length = 286

 Score = 44.7 bits (104), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 2/164 (1%)

Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR-I 260
           L +I   RE+  ++  + +A + G+   A++G+M+I++EI A+ +M +  +  L + R I
Sbjct: 108 LSAIANSRELAPVVVGIALAAKVGTGFTAQVGAMRISDEIAALDSMAIRSIPFLATTRMI 167

Query: 261 WALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320
            A++  LP+  +    S I    +V+W Y       +   FH   T  ++     KA   
Sbjct: 168 AAMVCILPIYMVGLLASYIATRLVVVW-YNGESSGTYDYFFHLALTPTDLLYSATKAIVF 226

Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A  + +V    G+        +G+     +  SI  + I D +F
Sbjct: 227 AAIVALVHCSYGYFASGGPEGVGQAAGRALRTSILAIGIFDVIF 270


>gi|251771004|gb|EES51588.1| probable ABC transporter, permease protein [Leptospirillum
           ferrodiazotrophum]
          Length = 211

 Score = 44.7 bits (104), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 53/90 (58%), Gaps = 4/90 (4%)

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE--IFSIDLMSILQLREIGVLLTAVMIA 221
           G+S +P++ +++ + GA +  +   +L + G +  + +I L  I  +  +G   TA+++ 
Sbjct: 4   GLSALPIITVVALLVGAGVVAETGIELPKLGIQNLVGTIVLHVIFGI--VGPFATALIVI 61

Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            RS S +  EIG+M+++ E+D I  +G++ 
Sbjct: 62  ARSTSGLAVEIGNMRVSGELDTIEMLGVNL 91


>gi|296394453|ref|YP_003659337.1| hypothetical protein Srot_2050 [Segniliparus rotundus DSM 44985]
 gi|296181600|gb|ADG98506.1| protein of unknown function DUF140 [Segniliparus rotundus DSM
           44985]
          Length = 290

 Score = 44.3 bits (103), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 96/211 (45%), Gaps = 6/211 (2%)

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           VG   + V+ ++    G VI  +G   LS      F+  + +    RE G L  A+  A 
Sbjct: 74  VGGGTLSVLAVLGLSIGGVIGLEGYNALSIINIAPFTSFVSAYGMTREFGPLAAALGFAA 133

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRI---WALIISLPLLTILANFSAI 279
           ++G  I AEIG+M+I EEIDA+   G+  +  +++ R+    A+I+ + LLT++  + A 
Sbjct: 134 QAGCRITAEIGAMRIAEEIDALEATGIRSIPFVVTTRVIAGVAVILPVYLLTLILGYEA- 192

Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339
              S+V+   +      +   F       ++   LIK      A+ ++   +G+      
Sbjct: 193 --CSLVVNVLHSQSSGTYDYNFSHFLVPRDVVLSLIKTAVFIVAVVMIHGYQGYYASGGP 250

Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             +G      +  SI IV +++    +F++ 
Sbjct: 251 EGVGLASGRAIRSSIVIVTVLNMFLTLFFWG 281


>gi|41406191|ref|NP_959027.1| hypothetical protein MAP0093 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41394539|gb|AAS02410.1| hypothetical protein MAP_0093 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 175

 Score = 44.3 bits (103), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 50/84 (59%), Gaps = 2/84 (2%)

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G +GV VV+   F  GA++A +G   L+  G    +  + S++  RE+  ++ ++  A +
Sbjct: 72  GTAGVAVVL--GFTAGALVAVEGYNFLNLLGLGPATGIISSLVNTRELAPIMASLAFAMQ 129

Query: 224 SGSAIVAEIGSMKINEEIDAIRTM 247
           +G    A++G+M+I EEIDA+ ++
Sbjct: 130 AGCRFTAQLGAMRIAEEIDALESL 153


>gi|330994287|ref|ZP_08318215.1| Protein trigalactosyldiacylglycerol 1 [Gluconacetobacter sp.
           SXCC-1]
 gi|329758754|gb|EGG75270.1| Protein trigalactosyldiacylglycerol 1 [Gluconacetobacter sp.
           SXCC-1]
          Length = 300

 Score = 43.9 bits (102), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 54/97 (55%), Gaps = 2/97 (2%)

Query: 171 VILISFVTGAVIAQQGAFQLSQFG-AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +++ + + G ++  Q A+ L   G A++    L+S+L +REI  +L  +++ GRSG   +
Sbjct: 102 IVITATLAGLMVVSQAAYWLGYAGMAQMTGSILVSVL-VREISPILVGIILMGRSGMLSL 160

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            EIG M +  E+  ++  G+D    L+ PR +A  + 
Sbjct: 161 TEIGMMVLGGEVRGLQARGIDPFLALVMPRTFAFTLG 197


>gi|226304400|ref|YP_002764358.1| YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229494174|ref|ZP_04387937.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
 gi|226183515|dbj|BAH31619.1| putative YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229318536|gb|EEN84394.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
          Length = 285

 Score = 43.9 bits (102), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 49/78 (62%), Gaps = 3/78 (3%)

Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR-I 260
           L ++   RE+  ++ A+ +A + G+   A+IG+M+I++EIDA+ +M +  +  L   R I
Sbjct: 107 LSAVANTRELAPVVVAIALAAKVGTGFTAQIGAMRISDEIDALDSMAIRSIPFLAGTRVI 166

Query: 261 WALIISLP--LLTILANF 276
            A+I  +P  ++ +LA++
Sbjct: 167 AAMICVIPIYMIGLLASY 184


>gi|258541977|ref|YP_003187410.1| ABC transporter permease [Acetobacter pasteurianus IFO 3283-01]
 gi|256633055|dbj|BAH99030.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-01]
 gi|256636112|dbj|BAI02081.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-03]
 gi|256639167|dbj|BAI05129.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-07]
 gi|256642221|dbj|BAI08176.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-22]
 gi|256645276|dbj|BAI11224.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-26]
 gi|256648331|dbj|BAI14272.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-32]
 gi|256651384|dbj|BAI17318.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256654375|dbj|BAI20302.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-12]
          Length = 299

 Score = 43.5 bits (101), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 45/210 (21%), Positives = 91/210 (43%), Gaps = 19/210 (9%)

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
           GV   +    +TG     Q  + L   G    +  ++  + +REI  +L  +++ GR+G 
Sbjct: 97  GVSASLFAGMLTGVAAVSQVIYWLGLTGLAKMTGSILVNVVIREIAPILVGILLLGRNGM 156

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV- 285
               E+G + I  ++ +++++G+D   +L+ PR  A  ++   L IL + S++I   ++ 
Sbjct: 157 LSATELGLLTIGGQVRSMQSVGMDPFLMLVLPRTLAFTVAGFTLGILFSMSSLITGYVMS 216

Query: 286 ---------IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
                    IW + D   A      ++   L  I  G +      C  G+ A  E     
Sbjct: 217 RISGVITNPIWTFLDDVAAAMSVTDYAVIPLKFIMVGFVVG-LGGCLTGLTATNE----- 270

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
              +SL   +     + + IV+++  LF++
Sbjct: 271 ---DSLRTLLPRGFSRGMLIVMMVSVLFSL 297


>gi|329114262|ref|ZP_08243024.1| ABC Transporter Permease Protein [Acetobacter pomorum DM001]
 gi|326696338|gb|EGE48017.1| ABC Transporter Permease Protein [Acetobacter pomorum DM001]
          Length = 298

 Score = 43.5 bits (101), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 45/211 (21%), Positives = 91/211 (43%), Gaps = 19/211 (9%)

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
            GV   +    +TG     Q  + L   G    +  ++  + +REI  +L  +++ GR+G
Sbjct: 95  GGVSASLFAGMLTGVAAVSQVIYWLGLTGLAKMTGSILVNVVIREIAPILVGILLLGRNG 154

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
                E+G + I  ++ +++++G+D   +L+ PR  A  ++   L IL + S++I   ++
Sbjct: 155 MLSATELGLLTIGGQVRSMQSVGMDPFLLLVLPRTLAFTVAGFTLGILFSMSSLITGYVM 214

Query: 286 ----------IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
                     IW + D   A      ++   L  I  G +      C  G+ A  E    
Sbjct: 215 SRISGVITNPIWTFLDDVAAAMSVTDYAIIPLKFIMVGFVVG-LGGCLTGLTATNE---- 269

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
               +SL   +     + + IV+++  LF++
Sbjct: 270 ----DSLRTLLPRGFSRGMLIVMMVSVLFSL 296


>gi|169631591|ref|YP_001705240.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169243558|emb|CAM64586.1| Putative YrbE family protein [Mycobacterium abscessus]
          Length = 285

 Score = 43.5 bits (101), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 62/107 (57%), Gaps = 3/107 (2%)

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G +GV +V+ ++   GA++A +    L   G    +  + S+   RE+  ++ ++  A +
Sbjct: 72  GTAGVALVLGVT--AGALVAIESYNFLDLLGLGPATGIISSLASTRELAPIMASLAFAMQ 129

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPL 269
           +G    A++GSM+I EEIDA+ ++ +  +  L++ R+ A II+ +PL
Sbjct: 130 AGCRFTAQLGSMRIAEEIDAMDSVAIRPIPFLVTTRLMAAIIAVIPL 176


>gi|324999479|ref|ZP_08120591.1| hypothetical protein PseP1_11961 [Pseudonocardia sp. P1]
          Length = 274

 Score = 43.5 bits (101), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 18/109 (16%)

Query: 199 SIDLMSILQLREIGVLLTAVM-------------IAGRSGSAIVAEIGSMKINEEIDAIR 245
           + D +S LQL  +G   +A++             +A   GS   A++G+M+++EEIDA+ 
Sbjct: 81  TFDALSDLQLEALGGFTSAIIAPRLLTPIIGGAALAATVGSGFTAQLGAMRVSEEIDALE 140

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
            MG+  +  L++ R+ A +I++  +  +A     IG     WK   + F
Sbjct: 141 VMGVRSLPYLVTTRLVAGMITIIPIFAMAMVGGWIG-----WKLTQVNF 184


>gi|31747666|gb|AAO38315.1| Lfe134p2 [Leptospirillum ferrooxidans]
          Length = 138

 Score = 43.1 bits (100), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 69/133 (51%), Gaps = 1/133 (0%)

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           +G+M++ E+IDA  ++ ++    L++PR++A + +LPLLT LA+   I G   V      
Sbjct: 1   LGTMRVTEQIDAFTSLAVNPQTYLMTPRVFAGLTALPLLTALADLVGIAGGYFVAVILLG 60

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
           +P   +         L + ++GL+K+      + +++   GF     +  +G+ VT  VV
Sbjct: 61  LPHNSYVRGIAEYVNLHDFYSGLVKSAVFGGLLSLLSCHMGFYASGGAAGVGRSVTVAVV 120

Query: 352 QSISIVIIIDSLF 364
            S S+ I++   F
Sbjct: 121 AS-SMAILVSDYF 132


>gi|108798620|ref|YP_638817.1| putative ABC transport system permease protein [Mycobacterium sp.
           MCS]
 gi|108769039|gb|ABG07761.1| putative ABC transport system permease protein [Mycobacterium sp.
           MCS]
          Length = 161

 Score = 43.1 bits (100), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 15/136 (11%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI---------L 173
            D   QA   G  IS+T +  A++Y+ +     ++RQ+  +G+    + +          
Sbjct: 26  RDLGDQARFYGQSISSTVQ-AATTYRAE-----VLRQIAAIGLGAGSLAVVGGTVAVVAF 79

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           ++  T A +A Q   Q+SQ G E  +    + + +R      +A   A   G+   A++G
Sbjct: 80  LNLSTSAALASQAYNQMSQVGVEALAGFTSAYVNVRLATPASSAFAFAATIGAGTTAQLG 139

Query: 234 SMKINEEIDAIRTMGL 249
           +MKINEEIDA+  MG+
Sbjct: 140 AMKINEEIDALAVMGI 155


>gi|118619946|ref|YP_908278.1| integral membrane protein YrbE6B [Mycobacterium ulcerans Agy99]
 gi|118572056|gb|ABL06807.1| conserved hypothetical integral membrane protein YrbE6B
           [Mycobacterium ulcerans Agy99]
          Length = 288

 Score = 43.1 bits (100), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 87/194 (44%), Gaps = 22/194 (11%)

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA++A +G   L+  G    +  + S++  RE+  ++ A+  A ++G     +IG+M++ 
Sbjct: 88  GALVAIEGYNFLNMMGIGPATGVVSSLVTTRELAPIMAALGFAVQAGCRFTTQIGAMRVA 147

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+  M +  +  L++ R+ A  +++  L I         A + I  Y      V F
Sbjct: 148 EEIDALNAMAIRPIPYLVTTRLLASAVAIIPLYI---------ACLTI-SYLSCQLMVTF 197

Query: 299 SRFHSTATLANIFTGLIKAP-----------FMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +   S     + FT LI A            F+A A  +V    GF        +G    
Sbjct: 198 TTHGSVGPYLHYFTMLIDARDVGYSVIKAAVFVALA-SVVQCYYGFCAEGGPEGVGVAAG 256

Query: 348 TCVVQSISIVIIID 361
             +  SI++VII++
Sbjct: 257 HAMRASITVVIIVN 270


>gi|296115253|ref|ZP_06833894.1| putative ABC transport system permease protein [Gluconacetobacter
           hansenii ATCC 23769]
 gi|295978354|gb|EFG85091.1| putative ABC transport system permease protein [Gluconacetobacter
           hansenii ATCC 23769]
          Length = 302

 Score = 43.1 bits (100), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 52/91 (57%), Gaps = 2/91 (2%)

Query: 177 VTGAVIAQQGAFQLSQFG-AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
           + G ++  Q A+ L   G A++    L+S+L +REI  +L  +++ GRSG   + +IG M
Sbjct: 110 LAGLMVVSQAAYWLGFAGMAQMTGSILVSVL-VREITPILMGIILLGRSGMLSLTQIGLM 168

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            +N ++  ++  GLD    L+ PR +A ++ 
Sbjct: 169 VLNGQVRTMQARGLDPFLTLVMPRAFAFMVG 199


>gi|319951382|ref|ZP_08025207.1| YrbE family protein [Dietzia cinnamea P4]
 gi|319434979|gb|EFV90274.1| YrbE family protein [Dietzia cinnamea P4]
          Length = 187

 Score = 42.7 bits (99), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 75/139 (53%), Gaps = 12/139 (8%)

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPL--LTILANFSAIIGASIVIW 287
           ++G+M+++EEIDA+  M +D +  L+S RI A +I+ +PL  L ++A+F A   A++ I+
Sbjct: 39  QLGAMRVSEEIDALEVMAIDSITYLVSTRIVAGMIAVVPLYSLAVIASFLASRFATVEIY 98

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF-----AVGVHSNSL 342
                 +  +FS F       +I    ++A  MA  I ++    G+       GV S ++
Sbjct: 99  GQSGGVYDHYFSTFLIP---TDILWSFVQAIAMAITIMLIHTYYGYNAAGGPAGVGS-AV 154

Query: 343 GKKVTTCVVQSISIVIIID 361
           G  V T ++  +++ +++ 
Sbjct: 155 GNAVRTSLIAVVTVTLLVS 173


>gi|315442435|ref|YP_004075314.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|315260738|gb|ADT97479.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 284

 Score = 42.7 bits (99), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 56/99 (56%), Gaps = 2/99 (2%)

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G +GV +V+ I+   GA++  +G   L   G    +  + S++  RE+  +  ++  A +
Sbjct: 71  GTAGVAIVLGIT--VGALVGIEGYNFLDLLGLGPATGIISSLVNTRELAPIALSLAFATQ 128

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
           +G    A++GSM+I EEIDA+ ++ +  +  L++ R+ A
Sbjct: 129 AGCRFTAQLGSMRIAEEIDALDSIAIRPIPYLVTTRLMA 167


>gi|330875117|gb|EGH09266.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 113

 Score = 42.7 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 43/66 (65%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           L+RQ+Y VGV  + ++++     G V+A QG   L+++G+E     ++++  LRE+G ++
Sbjct: 48  LVRQLYSVGVMSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVV 107

Query: 216 TAVMIA 221
           TA++ A
Sbjct: 108 TALLFA 113


>gi|169628784|ref|YP_001702433.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169240751|emb|CAM61779.1| Putative YrbE family protein [Mycobacterium abscessus]
          Length = 272

 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 54/92 (58%), Gaps = 1/92 (1%)

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA++A +G   L   G    +  + S++  RE+  ++ A+  A ++G     ++GSM+I 
Sbjct: 72  GALVAIEGYNFLELMGLGPATGVISSLVTTRELAPIMAALAFAVQAGCRFTTQLGSMRIA 131

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIIS-LPL 269
           EE+DA+ ++ +  +  L++ R+ A +++ +PL
Sbjct: 132 EEVDAMDSLAIRPIPYLVTTRLLASVVAIIPL 163


>gi|108757210|ref|YP_632090.1| hypothetical protein MXAN_3910 [Myxococcus xanthus DK 1622]
 gi|108461090|gb|ABF86275.1| putative membrane protein [Myxococcus xanthus DK 1622]
          Length = 248

 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 47/70 (67%)

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
           L +RE+G  ++A++ A R+G+A  AE+ +M +NE+++A+     D    L++PR++A ++
Sbjct: 83  LLIRELGPAVSALLTASRAGAAHAAELSTMSVNEQVEALEMSAGDPYADLVAPRVFAGVM 142

Query: 266 SLPLLTILAN 275
            +PLL IL  
Sbjct: 143 GVPLLCILGT 152


>gi|311741975|ref|ZP_07715785.1| ABC superfamily ATP binding cassette transporter membrane protein
           [Aeromicrobium marinum DSM 15272]
 gi|311314468|gb|EFQ84375.1| ABC superfamily ATP binding cassette transporter membrane protein
           [Aeromicrobium marinum DSM 15272]
          Length = 283

 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 32/163 (19%), Positives = 73/163 (44%)

Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268
           RE   ++  + +    G+   A++G+M+++EEIDA+  M +  +  L++ RI A ++++ 
Sbjct: 114 REAAPIMACIALTATVGAGFTAQLGAMRVSEEIDALDVMAVPSIPYLVTTRIVAGMVAVV 173

Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328
            L  +   +  +   +++   +      +   F +     ++    +K    A  I  V 
Sbjct: 174 PLFAIGLITMFLATQVMVTVAFGQATGTYQHYFDTFLVPGDVALAGVKVLLTAVVIMCVC 233

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
              G+        +G+ V   V  S+  V+ ID +F I ++ +
Sbjct: 234 CYYGYTASGGPAGVGRSVGRAVRTSLITVMSIDLVFGIAFWGV 276


>gi|125591222|gb|EAZ31572.1| hypothetical protein OsJ_15716 [Oryza sativa Japonica Group]
          Length = 322

 Score = 42.0 bits (97), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 25/134 (18%), Positives = 63/134 (47%)

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
            ++E+ D +R +G   V  L+ PR+ A +++LP+LT+++    +  ++ +    + +  +
Sbjct: 177 PVSEQTDTLRVLGAQPVDYLVVPRVVACVLALPVLTLMSFALGLASSAFLADSIFGVSTS 236

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           +            ++ + L+K+      I +V+   G      +  +G+  T+ VV S+ 
Sbjct: 237 IILESARRALRPWDLISSLLKSQVFGAIIAVVSCAWGVTTHGGAKGVGESTTSAVVVSLV 296

Query: 356 IVIIIDSLFAIFYF 369
            + + D   +  +F
Sbjct: 297 GIFVADFALSCLFF 310


>gi|296141464|ref|YP_003648707.1| hypothetical protein Tpau_3790 [Tsukamurella paurometabola DSM
           20162]
 gi|296029598|gb|ADG80368.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM
           20162]
          Length = 284

 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 49/88 (55%)

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           +GA +A +    L+  G    +  +  +  +RE+  +   +  A ++G  + A+IGSM+I
Sbjct: 83  SGAAVAIEAYAGLNLIGFGPLTGVIGGLANIREMIPISAGIGFAAQAGCRMTAQIGSMRI 142

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALII 265
            EEIDA+  +G+  +  ++S R+ A I+
Sbjct: 143 AEEIDAVEALGIRSIPYVVSTRLIAGIV 170


>gi|148823178|ref|YP_001287932.1| integral membrane protein YrbE3a [Mycobacterium tuberculosis F11]
 gi|148721705|gb|ABR06330.1| hypothetical integral membrane protein yrbE3A [Mycobacterium
           tuberculosis F11]
          Length = 141

 Score = 41.6 bits (96), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 68/139 (48%), Gaps = 6/139 (4%)

Query: 236 KINEEIDAIRTMGLDFVRILISPRIW-ALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
            I EE+DA+R MG++ ++ L +PR+  A  +SL L +++   + +IGA         +  
Sbjct: 3   TIREELDALRVMGINPIQALAAPRVLAATTVSLALNSVVTA-TGLIGAFFCSVFLMHVSA 61

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
             + +   +     ++   +IKA       G++A  +G +VG     +G+ V   VV + 
Sbjct: 62  GAWVTGLTTLTHTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAF 121

Query: 355 SIVIIIDSLFAIFYFAIGI 373
            ++ +I+    I   A+GI
Sbjct: 122 IVLFVIN----IVVTAVGI 136


>gi|183980210|ref|YP_001848501.1| integral membrane protein YrbE6B [Mycobacterium marinum M]
 gi|183173536|gb|ACC38646.1| conserved hypothetical integral membrane protein YrbE6B
           [Mycobacterium marinum M]
          Length = 288

 Score = 41.2 bits (95), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 86/194 (44%), Gaps = 22/194 (11%)

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA++A +G   L+  G       + S++  RE+  ++ A+  A ++G     +IG+M++ 
Sbjct: 88  GALVAIEGYNFLNMMGIGPAIGVVSSLVTTRELAPIMAALGFAVQAGCRFTTQIGAMRVA 147

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+  M +  +  L++ R+ A  +++  L I         A + I  Y      V F
Sbjct: 148 EEIDALNAMAIRPIPYLVTTRLLASAVAIIPLYI---------ACLTI-SYLSCQLMVTF 197

Query: 299 SRFHSTATLANIFTGLIKAP-----------FMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +   S     + FT LI A            F+A A  +V    GF        +G    
Sbjct: 198 TTHGSVGPYLHYFTMLIDARDVGYSVIKAVVFVALA-SVVQCYYGFCAEGGPEGVGVAAG 256

Query: 348 TCVVQSISIVIIID 361
             +  SI++VII++
Sbjct: 257 HAMRASITVVIIVN 270


>gi|169631674|ref|YP_001705323.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169243641|emb|CAM64669.1| Putative YrbE family protein [Mycobacterium abscessus]
          Length = 286

 Score = 41.2 bits (95), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 43/70 (61%)

Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263
           S++  RE+  ++ A+  A ++G    A++G+ +INEEIDA+  + +  +  L++ R+ A 
Sbjct: 110 SLVSTRELAPVMAALAFAMQAGCRFTAQLGAQRINEEIDALDALAIRPIPYLVTTRLLAS 169

Query: 264 IISLPLLTIL 273
            +++  L +L
Sbjct: 170 TVAVVPLYLL 179


>gi|114328087|ref|YP_745244.1| ABC transporter permease [Granulibacter bethesdensis CGDNIH1]
 gi|114316261|gb|ABI62321.1| ABC transporter permease protein [Granulibacter bethesdensis
           CGDNIH1]
          Length = 273

 Score = 39.7 bits (91), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 38/66 (57%)

Query: 201 DLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRI 260
            +++ + LRE+  +L  +++ GRSG  +++E+G +  N  I  +   G+D   ++I PR 
Sbjct: 105 TILATILLRELSPILVGIILLGRSGMPMISELGMLSANGHIRTLEAQGIDPFILIIVPRT 164

Query: 261 WALIIS 266
            A  +S
Sbjct: 165 IAFTVS 170


>gi|74316998|ref|YP_314738.1| ABC-type transport system permease [Thiobacillus denitrificans ATCC
           25259]
 gi|74056493|gb|AAZ96933.1| ABC-type transport system ipermease component [Thiobacillus
           denitrificans ATCC 25259]
          Length = 264

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 39/69 (56%)

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            FG   F+ ++   + + E+   LTA+ +A RSGSAI  E+  M++N E+DA+    +  
Sbjct: 86  DFGLTAFASEMTIRVLVLELLPFLTALFVALRSGSAINTEVALMQVNNELDALAHCKVPP 145

Query: 252 VRILISPRI 260
           ++    PR+
Sbjct: 146 MQFEFLPRL 154


>gi|126433442|ref|YP_001069133.1| hypothetical protein Mjls_0833 [Mycobacterium sp. JLS]
 gi|126233242|gb|ABN96642.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 297

 Score = 37.7 bits (86), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 15/29 (51%), Positives = 21/29 (72%)

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPR 259
           + G+  I EE+DA+R MG+D VR L+ PR
Sbjct: 151 DFGARAIREELDAMRVMGVDPVRQLVVPR 179


>gi|317508278|ref|ZP_07965958.1| hypothetical protein HMPREF9336_02330 [Segniliparus rugosus ATCC
           BAA-974]
 gi|316253453|gb|EFV12843.1| hypothetical protein HMPREF9336_02330 [Segniliparus rugosus ATCC
           BAA-974]
          Length = 290

 Score = 37.7 bits (86), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 68/146 (46%), Gaps = 6/146 (4%)

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRI---WALIISLPLLTILANFSAIIGASI 284
           I AE+G+M+I EEIDA+   G+  +  +++ R+    A+I+ + LLT++  + A    S+
Sbjct: 139 ITAEVGAMRIAEEIDALEATGIRSIPFVVTTRVIAGIAVILPVYLLTLILGYEA---CSL 195

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
           V+    +     +   F       ++   LIK       + IV   +G+        +G 
Sbjct: 196 VVNLLNNQSAGTYNYYFMRFLVPQDVVLSLIKTAIFIVVVVIVHGYQGYYASGGPEGVGL 255

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370
                +  SI IV+I++ L  + ++ 
Sbjct: 256 ASGRAIRSSIVIVVILNMLLTLLFWG 281


>gi|228962766|ref|ZP_04124032.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar
          pakistani str. T13001]
 gi|228796919|gb|EEM44263.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar
          pakistani str. T13001]
          Length = 106

 Score = 37.4 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 3/51 (5%)

Query: 41 IVDLSAITEIDTIGAELIMYFMEKYH---GKIKLQGVSTHIEQLFSLISFT 88
          ++D+S +T +D+ G  + M  ++K H   G +++ GVS+ I++LF L  FT
Sbjct: 46 VLDVSRVTYMDSTGLGVCMGLLKKVHKQDGFLEVTGVSSRIQRLFDLTGFT 96


>gi|150401176|ref|YP_001324942.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
           [Methanococcus aeolicus Nankai-3]
 gi|150013879|gb|ABR56330.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
           [Methanococcus aeolicus Nankai-3]
          Length = 449

 Score = 37.4 bits (85), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 71/174 (40%), Gaps = 28/174 (16%)

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           VIA  G    S F   I  IDL  + +LR I   +     A  S SA+VA  G++ + E 
Sbjct: 108 VIATGG----SSFIPPIEGIDLEGVFKLRTIEDGMKIKEYAENSKSAVVAGAGAIGL-EM 162

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
             A++ MGLD V I ++P++    + + +   +  +   IG   +I K    P A     
Sbjct: 163 AYALKVMGLDVVVIEMAPQVLPRALDIDMAETVKKYLEDIGIKFIIGK----PLAKIIGE 218

Query: 301 FHSTATLAN---IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
               A  A+   I T +I                  A GV SN+   K+  C V
Sbjct: 219 DKVRAIYADDREIDTDMII----------------LATGVRSNTELAKMAGCEV 256


>gi|219109650|ref|XP_002176579.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411114|gb|EEC51042.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1159

 Score = 37.0 bits (84), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 7/88 (7%)

Query: 41  IVDLSAITEIDTIGAEL---IMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97
           ++DL+ +T IDT   ++   I   + K++ K+ L GVS ++ Q+ ++        +  +K
Sbjct: 845 VLDLTLVTGIDTSAVDVFSDIFSMVGKHNCKLFLSGVSNNLRQVMAMAGVKPESSVDRKK 904

Query: 98  PQRSFFYNSFKNLHYHIGKKIVKFINDS 125
            Q  F    F NL   IGK     ++D+
Sbjct: 905 RQLRF----FSNLDTAIGKAEDMLLDDA 928


>gi|297697565|ref|XP_002825922.1| PREDICTED: tetratricopeptide repeat protein 23-like isoform 1
           [Pongo abelii]
 gi|297697567|ref|XP_002825923.1| PREDICTED: tetratricopeptide repeat protein 23-like isoform 2
           [Pongo abelii]
          Length = 447

 Score = 37.0 bits (84), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 14/38 (36%), Positives = 25/38 (65%)

Query: 74  VSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLH 111
           +S H++++ + +S THRKK +N+ PQ + F    + LH
Sbjct: 9   ISDHLDEVVAAVSITHRKKFQNKLPQTALFQPPREKLH 46


>gi|324999497|ref|ZP_08120609.1| hypothetical protein PseP1_12051 [Pseudonocardia sp. P1]
          Length = 263

 Score = 36.6 bits (83), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 14/26 (53%), Positives = 21/26 (80%)

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVR 253
           + A++G+ KI +E+DA+R MGLD VR
Sbjct: 112 LTADLGARKIRDELDAMRVMGLDPVR 137


>gi|86607080|ref|YP_475843.1| YjgP/YjgQ family protein [Synechococcus sp. JA-3-3Ab]
 gi|86555622|gb|ABD00580.1| putative membrane protein, YjgP/YjgQ family [Synechococcus sp.
           JA-3-3Ab]
          Length = 392

 Score = 36.2 bits (82), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 72/143 (50%), Gaps = 21/143 (14%)

Query: 137 SNTGEFCASSYKFKGFLLS--LIRQM---YYVGVSGVPVVILIS--FVTGAVIAQQGAFQ 189
           + TG F  S  K  GF L   L ++M   +++GV+G  V++L +  F+   ++ ++GA  
Sbjct: 15  AQTGSFWGS-LKLGGFFLEFYLCKEMIRPFFLGVAGGTVMMLGNQLFIYADLLVKKGAPP 73

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L+          ++ IL L    +L+    IAG   + +   +G M  + EI A+R  G+
Sbjct: 74  LT----------ILHILLLNLPAILVVTFPIAGLFATLLT--LGRMGADSEITALRAAGI 121

Query: 250 DFVRILISPRIWALIIS-LPLLT 271
            + ++LI      L++S L LLT
Sbjct: 122 PYRKVLIPVLCIGLLVSGLALLT 144


>gi|301775065|ref|XP_002922953.1| PREDICTED: tetratricopeptide repeat protein 23-like [Ailuropoda
           melanoleuca]
          Length = 446

 Score = 35.8 bits (81), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 15/38 (39%), Positives = 24/38 (63%)

Query: 74  VSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLH 111
           +S H++++ + +S T RKKI+NQ PQ   F    + LH
Sbjct: 9   ISNHLDEIVAAVSITPRKKIQNQLPQTVLFQPPQEKLH 46


Searching..................................................done


Results from round 2




>gi|254780138|ref|YP_003064551.1| ABC transporter [Candidatus Liberibacter asiaticus str. psy62]
 gi|254039815|gb|ACT56611.1| ABC transporter [Candidatus Liberibacter asiaticus str. psy62]
          Length = 373

 Score =  410 bits (1054), Expect = e-112,   Method: Composition-based stats.
 Identities = 373/373 (100%), Positives = 373/373 (100%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY
Sbjct: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
           FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK
Sbjct: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA
Sbjct: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE
Sbjct: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR
Sbjct: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
           FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII
Sbjct: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360

Query: 361 DSLFAIFYFAIGI 373
           DSLFAIFYFAIGI
Sbjct: 361 DSLFAIFYFAIGI 373


>gi|92117460|ref|YP_577189.1| hypothetical protein Nham_1921 [Nitrobacter hamburgensis X14]
 gi|91800354|gb|ABE62729.1| protein of unknown function DUF140 [Nitrobacter hamburgensis X14]
          Length = 388

 Score =  317 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 135/375 (36%), Positives = 211/375 (56%), Gaps = 10/375 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S       R  G+W +  +  +         +  ++ S  +D+S ++E+DT+GA L+   
Sbjct: 21  SRGDALELRPDGSWIAANVIALETLADAVAPQVERAKSLKMDMSGLSELDTLGAWLLEKL 80

Query: 62  MEKYHG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
             +       +++ GVS +   L   +   +R      K +     N        IG+  
Sbjct: 81  SRRVASADHPVEVVGVSENYAGLIEEVRHVNRHNPPPPKAR-----NPVIAKVEEIGRSA 135

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
                D      +LG +              +  L SL+ Q+Y VG   +P+++LI+F+ 
Sbjct: 136 WGSREDVAVFLQMLGSLCVALLGIIRKPRSLR--LTSLVYQLYRVGWQAIPIILLITFLI 193

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQG F   +FGA+ + +D++ IL LRE+GVL+ A+M+AGRSGSA  AE+GSMK+ 
Sbjct: 194 GAIIAQQGFFHFRKFGADSYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAELGSMKMR 253

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+ TMGLD V +LI PR+ AL+ +LP+LT + + +A+ G  +V W Y  +  ++F 
Sbjct: 254 EEIDALSTMGLDPVVVLILPRVLALVSALPILTFIGSMAALYGGGLVAWFYGGMGPSIFI 313

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +R H   ++ +   G+IKAPFMA  IGIVA  EG  V   + SLGK+ TT VV+SI +VI
Sbjct: 314 ARLHDAVSVTHFEVGMIKAPFMALVIGIVACSEGLRVKGSAESLGKQTTTSVVKSIFLVI 373

Query: 359 IIDSLFAIFYFAIGI 373
           ++D LFA+F+ +IG+
Sbjct: 374 VLDGLFAVFFASIGM 388


>gi|85716130|ref|ZP_01047106.1| ABC transporter permease protein [Nitrobacter sp. Nb-311A]
 gi|85697129|gb|EAQ35011.1| ABC transporter permease protein [Nitrobacter sp. Nb-311A]
          Length = 370

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 136/373 (36%), Positives = 214/373 (57%), Gaps = 8/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S       R  G W +  ++ +      A  +  ++ S  +D+S ++E+DT+GA L+   
Sbjct: 5   SRGDALELRPDGFWIAANVTVLEALADAAAPQVERAKSLKMDMSGLSELDTLGAWLLEKL 64

Query: 62  MEKYHG-KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
             +  G   ++ GVS +   L   +   +R  +   K +     N        +G+    
Sbjct: 65  SRQIAGHPAEIVGVSENYAGLIEEVRHVNRHNLPPPKAR-----NPVIAKVEEVGRAAWN 119

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
              D      +LG +              +  L SL+ Q+Y VG   +P+++LI+F+ GA
Sbjct: 120 SREDVAVFLQMLGSLCVALLGIIRKPRSLR--LTSLVYQLYRVGWQAIPIILLITFLIGA 177

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           +IAQQG F   +FGA+ + +D++ IL LRE+GVL+ A+M+AGRSGSA  AE+GSMK+ EE
Sbjct: 178 IIAQQGFFHFRKFGADSYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAELGSMKMREE 237

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+ TMGLD V +LI PR+ AL+++LP+LT + + +A+ G  +V W Y  +  ++F +R
Sbjct: 238 IDALSTMGLDPVVVLILPRVLALVLALPILTFIGSMAALYGGGLVAWFYGGMGPSIFIAR 297

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
            H   ++ +   G+IKAPFMA  IGIVA  EG  V   + SLGK+ TT VV+SI +VI++
Sbjct: 298 LHDAVSVTHFQVGMIKAPFMALVIGIVACSEGLRVKGSAESLGKQTTTSVVKSIFLVIVL 357

Query: 361 DSLFAIFYFAIGI 373
           D LFA+F+ +IG+
Sbjct: 358 DGLFAVFFASIGM 370


>gi|209885947|ref|YP_002289804.1| ABC transporter permease protein [Oligotropha carboxidovorans OM5]
 gi|209874143|gb|ACI93939.1| ABC transporter permease protein [Oligotropha carboxidovorans OM5]
          Length = 377

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 145/373 (38%), Positives = 218/373 (58%), Gaps = 11/373 (2%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G      AG+W + ++S +   V  A   +  + +  +D+SA+ EIDTIGA L+   + 
Sbjct: 13  DGRAQMYAAGSWTASQVSALEPAVEAATRTASGARALQLDMSAVNEIDTIGAWLLERMIR 72

Query: 64  ---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
              +   +IK  G+S     L   +         N  P      N      Y IG+  V 
Sbjct: 73  HARQAGSEIKTVGISERFAGLIEELRSA------NLNPPVYEKQNPLLLKLYQIGQSTVS 126

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
            + +      +LG + +          + +  L S I Q++ VG   VP+++LI+F+ GA
Sbjct: 127 SLQELLIFIDMLGRLGTVLARVILHPRRLR--LTSTIYQLHKVGWQAVPIIVLITFLIGA 184

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           +IAQQG F   +FGA+ + +D++ IL LREIGVL+ A+M+AGRSGSA  AE+GSMK+ EE
Sbjct: 185 IIAQQGIFHFRKFGADAYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMREE 244

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+ TMGLD + +LI PR+ ALII+LP+LT + + +A+ G  ++ W Y D+  A F +R
Sbjct: 245 IDALTTMGLDPLEVLILPRVIALIIALPILTFIGSIAALYGGGLISWLYGDMMPATFIAR 304

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
            H   ++ +   GLIKAPFMA  IGIVA  EG  V   + SLG++ TT VV+SI +VI++
Sbjct: 305 LHEAVSVTHFEVGLIKAPFMALVIGIVASSEGLRVKGSAESLGRQTTTSVVKSIFLVIVL 364

Query: 361 DSLFAIFYFAIGI 373
           D LFA+F+ +IG+
Sbjct: 365 DGLFAVFFASIGM 377


>gi|115523755|ref|YP_780666.1| hypothetical protein RPE_1737 [Rhodopseudomonas palustris BisA53]
 gi|115517702|gb|ABJ05686.1| protein of unknown function DUF140 [Rhodopseudomonas palustris
           BisA53]
          Length = 382

 Score =  312 bits (799), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 135/375 (36%), Positives = 202/375 (53%), Gaps = 10/375 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            + G+   R  G+W +     +         +        +DL+ + EIDT+GA L+   
Sbjct: 15  DDAGVLQLRPGGSWTAGNAVVLERLFEEVSPQLQGVRGLRIDLAGVQEIDTLGAWLLEKM 74

Query: 62  MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
             +   +    +L GV      L   +   +R       P      N        +G+  
Sbjct: 75  SRRAAQQGVSSELVGVDERHAGLIDEVRQVNRN-----APAPHPRGNFVLGWLDQLGRLT 129

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
                +      +LG +              +  L SL  Q+Y VG   +P+++LI+F+ 
Sbjct: 130 WASRVEVLVFLQMLGALAVALLGVLRRPRSLR--LTSLFYQVYRVGWQAIPIMLLITFLI 187

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQG F   +FGAE + +D++ IL LREIGVL+ A+M+AGRSGSA  AE+GSMK+ 
Sbjct: 188 GAIIAQQGIFHFRKFGAESYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMR 247

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+ TM LD V +LI PR+ ALII+LP+L+ L + +A+ G  +V W Y  +   +F 
Sbjct: 248 EEIDALSTMDLDPVEVLILPRVLALIIALPILSFLGSMAALYGGGLVAWFYGGMSPTIFI 307

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +R H   ++ +   G+IKAPFMA  IGIVA  EG  V   + SLG++ TT VV+SI  VI
Sbjct: 308 ARLHEAVSVTHFEVGIIKAPFMALVIGIVACSEGLRVKGSAESLGRQTTTSVVKSIFCVI 367

Query: 359 IIDSLFAIFYFAIGI 373
           ++D LFA+F+ +IG+
Sbjct: 368 VLDGLFAVFFASIGM 382


>gi|85373087|ref|YP_457149.1| ABC-type transport system permease component [Erythrobacter
           litoralis HTCC2594]
 gi|84786170|gb|ABC62352.1| ABC-type transport system permease component [Erythrobacter
           litoralis HTCC2594]
          Length = 370

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 121/371 (32%), Positives = 204/371 (54%), Gaps = 14/371 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G TV R AG +    I  I  D+     ++++   + VDL  +++IDT+GA +    
Sbjct: 12  QDDGTTVLRLAGPYLVSTIGPIDQDL-----RALEGGFSAVDLGDVSQIDTVGAWMACTV 66

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
              +  +I+    S    +L   +  +  K     +         F+ +    G+++V+F
Sbjct: 67  AGAHDAEIR--NASDRASRLIDAVQGSINKAETTPE-----RDPLFRRVAMMTGERVVEF 119

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
            ++        G +++  G       +F     +L RQ+  VG++ +P++ L+SF+ G V
Sbjct: 120 GHNLLDLLSFAGAIVAGFGRLLLHPGRFPH--KALFRQLELVGINALPIIGLMSFLIGIV 177

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IAQQGA QL QFGAE  +++L+  + +RE+GVL+TA+M+AGRSGSA  A+IG+MK+ EE+
Sbjct: 178 IAQQGAVQLEQFGAETLTVNLVGRITMRELGVLMTAIMVAGRSGSAFAAQIGTMKLTEEV 237

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+RT+G+  V  L+ PRI A ++ +PLL   +   AI+G ++V      IPF  F  R 
Sbjct: 238 DAMRTIGISPVEALVLPRILAAVLMMPLLGFYSACVAIVGGAVVSEFALGIPFWNFLERI 297

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                  +++ GLIKAP     + +    +G  V  +S  +G + T  VVQ+I +VI++D
Sbjct: 298 QDVVPTYDLWVGLIKAPVFGLIVALAGCYQGMQVRGNSEEVGSRTTKAVVQAIFMVIVLD 357

Query: 362 SLFAIFYFAIG 372
           + FA+F+  IG
Sbjct: 358 AFFAVFFTEIG 368


>gi|86357964|ref|YP_469856.1| ABC transporter permease [Rhizobium etli CFN 42]
 gi|86282066|gb|ABC91129.1| probable ABC transporter, permease protein [Rhizobium etli CFN 42]
          Length = 389

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 154/373 (41%), Positives = 230/373 (61%), Gaps = 11/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S+      R +GNW+S  +  +  +      +  ++ +  +DLS +++IDT G  L+   
Sbjct: 23  SDGSGQHVRLSGNWRSAYVHLVLHEFEKLQRE--KTGNLTLDLSDVSDIDTAGIWLLCRL 80

Query: 62  M---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
               E     ++  G + HI+++  + S    K     +P++    +    +   +GK  
Sbjct: 81  KKQEEAAGRTVRFVGTNPHIDEMLEMFSEEPAK----PEPEQKEKVSLAARILAPLGKMT 136

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
               ++  +  +ILG  +                  S++ Q+ ++GV  VP+++L+SF+ 
Sbjct: 137 YDIWDNLAASMYILGSAVRGAQMKLGRGS--GVSPASIVNQIDHMGVRAVPIILLMSFLI 194

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ 
Sbjct: 195 GAIIAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMR 254

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA++ MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA++V W Y  I FA F 
Sbjct: 255 EEIDALKVMGLNPIGVLIFPRLVALTIALPLLTVLANFASLAGAAVVAWGYSGITFANFL 314

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +R H   TL+ + +G+IKAPFMA  IGIVA  EG  VG  + SLG+ VT  VV++I +VI
Sbjct: 315 ARLHEAITLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTASVVKAIFVVI 374

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 375 LMDGLFAMFYAAI 387


>gi|299132338|ref|ZP_07025533.1| protein of unknown function DUF140 [Afipia sp. 1NLS2]
 gi|298592475|gb|EFI52675.1| protein of unknown function DUF140 [Afipia sp. 1NLS2]
          Length = 377

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 140/373 (37%), Positives = 218/373 (58%), Gaps = 11/373 (2%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G      AG+W + ++S +   V  AI+    +    +D+SA+ +IDTIGA L+   + 
Sbjct: 13  DGSAQLYAAGSWTASQVSSLEPVVNAAIHNVSGARVLQLDMSAVDQIDTIGAWLLERMIR 72

Query: 64  KYHG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
           + H    +I+  G+      L   +         N  P      N+     Y IG+  V 
Sbjct: 73  RVHQAGSEIRTVGIHERFAGLIDELRSV------NLHPPVHERQNAVLLKLYQIGQSTVA 126

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
            + +      +LG + S          + +  L S I Q++ VG   VP++++I+F+ GA
Sbjct: 127 SLQELLVFLEMLGRLGSVLARLAFKPSRLR--LTSTIYQLHKVGWQAVPIMVMITFLIGA 184

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           +IAQQG F   +FGA+ + +D++ IL LREIGVL+ A+M+AGRSGSA  AE+GSMK+ EE
Sbjct: 185 IIAQQGIFHFRKFGADAYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMREE 244

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+ TMGLD + +L+ PR+ AL+I+LP+L  + + +A+ G  ++ W Y  +  A+F +R
Sbjct: 245 IDALTTMGLDPLEVLVLPRVLALVIALPILAFIGSIAALYGGGLISWLYGGMSPAIFIAR 304

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
            H   ++ +   GLIKAPFMA  IGIVA  EG  V   + SLG++ TT VV+SI +VI++
Sbjct: 305 LHEAVSVTHFEVGLIKAPFMALVIGIVASSEGLRVKGSAESLGRQTTTSVVKSIFLVIVL 364

Query: 361 DSLFAIFYFAIGI 373
           D LFA+F+ +IG+
Sbjct: 365 DGLFAVFFASIGM 377


>gi|152992948|ref|YP_001358669.1| ABC transporter, permease [Sulfurovum sp. NBC37-1]
 gi|151424809|dbj|BAF72312.1| ABC transporter, permease [Sulfurovum sp. NBC37-1]
          Length = 367

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 115/363 (31%), Positives = 184/363 (50%), Gaps = 18/363 (4%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK--IK 70
           G W    + EI  +    +       S + DLS +   D+ G  L M + +K   K  ++
Sbjct: 21  GEWTLATVPEIEKE----LKGIPMGKSVLWDLSGVEAFDSAGVLLFMEYYDKLKQKNAVE 76

Query: 71  LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAH 130
           L G S   ++++ L+     +K+  +K           +    +GK  +  + D      
Sbjct: 77  LVGYSESQKEMYDLLRKHMIEKVPERK----------TSFFEELGKSTLVVLGDIKDLIT 126

Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190
            LG +              +  +  ++  +++ G + + ++ L SF+ G VIA QGA QL
Sbjct: 127 FLGHLFFTLFNVLFHPRNIR--IKEMVYHIHHSGFNALMIIGLTSFLVGMVIAYQGAVQL 184

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
           ++FGA+IF +D + I  +RE+G L+TA++IAGRSGSA  AEIG+MKI EEI A+RTMG D
Sbjct: 185 AKFGADIFIVDTVGISMVRELGPLMTAIVIAGRSGSAYTAEIGAMKITEEIAAMRTMGFD 244

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
               L+ PRI+ALI++LPLL   ++   I G  +      +I  A F  R +    + + 
Sbjct: 245 PYNFLVMPRIFALIVALPLLIFFSDIMGIFGGMVASQMELNISMAQFVDRLNEVLEVKHY 304

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             G+IK P  A  I  +    GF V  ++ SLG + T  VV SI +VI  D+LF++ Y  
Sbjct: 305 ILGMIKGPVFAFVIAAIGCFRGFQVSDNTESLGLQTTASVVNSIFLVIAFDALFSVIYTE 364

Query: 371 IGI 373
           + +
Sbjct: 365 LNL 367


>gi|39937024|ref|NP_949300.1| hypothetical protein RPA3963 [Rhodopseudomonas palustris CGA009]
 gi|192292851|ref|YP_001993456.1| hypothetical protein Rpal_4485 [Rhodopseudomonas palustris TIE-1]
 gi|39650881|emb|CAE29404.1| putative permease of ABC transporter [Rhodopseudomonas palustris
           CGA009]
 gi|192286600|gb|ACF02981.1| protein of unknown function DUF140 [Rhodopseudomonas palustris
           TIE-1]
          Length = 383

 Score =  308 bits (790), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 131/373 (35%), Positives = 199/373 (53%), Gaps = 5/373 (1%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           ++         +G+W +     +   V  A        +  +D+S I  +DT GA LI  
Sbjct: 16  IARGEGLALCASGSWTARFAPALERLVTEAEQLGGSKPNVSIDVSGIARLDTFGAWLIER 75

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
                        ++       SL+    +      +P+R     S +     +G+ I  
Sbjct: 76  LRRNLGQDGTEARIAGLSTNYASLVDEVRQVSEAGPEPRRG---GSLRAPIERLGRTIYA 132

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           FI+D  +   ++G V++           F+  L S +  +  V    VP+++LI+F+ G 
Sbjct: 133 FIDDIVALISMMGAVLAGVLRVVVRPTSFR--LTSTVHHLEQVCWRAVPIIVLITFLIGC 190

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           +IAQQG F   +FGA++F +D++ +L LREIGVLL ++M+AGRSGSA  AE+GSMK+ EE
Sbjct: 191 IIAQQGIFHFRKFGADVFVVDMLGVLVLREIGVLLVSIMVAGRSGSAYTAELGSMKMREE 250

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+RTMG D + +LI PR+ AL++++P+LT L   SA+ G  +V W Y  +    F  R
Sbjct: 251 IDALRTMGFDPIDVLIVPRLIALVLAVPILTFLGAMSALYGGGLVAWMYGGVDPEAFLLR 310

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                ++ +   G+IKAP MA  IGIVA  EG AV   + SLG   T  VV+SI  VI++
Sbjct: 311 LRDAISIDHFTVGMIKAPVMAVVIGIVACVEGLAVQGSAESLGSHTTASVVKSIFFVIVM 370

Query: 361 DSLFAIFYFAIGI 373
           D +FAIF+  IGI
Sbjct: 371 DGVFAIFFAGIGI 383


>gi|292490603|ref|YP_003526042.1| hypothetical protein Nhal_0469 [Nitrosococcus halophilus Nc4]
 gi|291579198|gb|ADE13655.1| protein of unknown function DUF140 [Nitrosococcus halophilus Nc4]
          Length = 380

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 108/374 (28%), Positives = 190/374 (50%), Gaps = 16/374 (4%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +  R  G W    IS++   + ++           VD S IT++DT GA L+   +
Sbjct: 20  DPATSTLRCLGTWTLYGISQLEQTLPLS---QSHPPVHAVDASGITQMDTGGAWLLQRLL 76

Query: 63  EKYHGKIKL---QGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
                + +    +G+    ++L  L+      +     P           +   IG+   
Sbjct: 77  ADLEQQTRPIPCKGLGQEQQKLLRLVQGGSTSQQLTTAPPP--------GILERIGRLSW 128

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
             + ++ S    +G  +       A   + +      +  +   G++ +P+V L+ F+ G
Sbjct: 129 AHVEEALSFLAFIGETLLYFLRSMAHPSRIR--WRPFLSNLQTAGINALPIVGLLIFLVG 186

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A QG  QL  +GA IF ++L+++  +RE+  L+ A++IAGR+GSA  A+IG+M++ E
Sbjct: 187 VVLAYQGGIQLRAYGANIFIVELVTLTMVRELAPLMAAIIIAGRTGSAFTAQIGTMQVTE 246

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDA+RT+G+  +  L+ P+I+AL+++LPLLT+ A+   I G  ++     ++ F  F  
Sbjct: 247 EIDALRTLGIPPMEQLVLPKIFALVLALPLLTVFADMVGIFGGMVMSQALLEVEFREFAQ 306

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           R      L++   G+ KAP  A  I  V   +GF VG  + S+G+  TT VVQ+I +VII
Sbjct: 307 RIPEVVPLSSFLIGVGKAPVFAVIIATVGCYQGFRVGGGAESVGRHTTTSVVQAIFLVII 366

Query: 360 IDSLFAIFYFAIGI 373
            D+ F+I +  +GI
Sbjct: 367 ADATFSILFSWLGI 380


>gi|241204915|ref|YP_002976011.1| hypothetical protein Rleg_2195 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240858805|gb|ACS56472.1| protein of unknown function DUF140 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 394

 Score =  307 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 161/373 (43%), Positives = 233/373 (62%), Gaps = 11/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           ++      R  GNW+S  I  +  D    + K  ++    VDLS I+EIDT G  L+   
Sbjct: 28  ADGSGQRVRLQGNWRSAYIHLVLRDFEKLLQK--KTGDLTVDLSDISEIDTAGIWLLCRL 85

Query: 62  M---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
               E     ++ +G ++HI+++  ++S    K     +P+++   +    +   IGK  
Sbjct: 86  KKQEEAGGRTVRFEGTNSHIDEMLEMVSEEPAKV----EPEQTEKVSLAARIFAPIGKMT 141

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
            +  ++  +  +ILG  +                  S++ Q+ ++GV  VP+++L+SF+ 
Sbjct: 142 YEVWDNFAAAMYILGSAVRGAQMKFGRGS--GVSPASIVNQIDHMGVRAVPIILLMSFLI 199

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ 
Sbjct: 200 GAIIAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMR 259

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA++ MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA+ V W Y  I FA F 
Sbjct: 260 EEIDALKVMGLNPIGVLIFPRLVALTIALPLLTVLANFASLGGAAAVAWGYSGITFANFL 319

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H   TL+ + +G+IKAPFMA  IGIVA  EG  VG  + SLG+ VT  VV++I +VI
Sbjct: 320 SRLHEAVTLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTAAVVKAIFVVI 379

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 380 LMDGLFAMFYAAI 392


>gi|146342154|ref|YP_001207202.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146194960|emb|CAL78985.1| putative ABC transporter (permease protein) [Bradyrhizobium sp.
           ORS278]
          Length = 378

 Score =  307 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 136/375 (36%), Positives = 214/375 (57%), Gaps = 10/375 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +   +   R +G+W S  ++++      A  K   +    +DL +++EIDT+GA LI   
Sbjct: 11  ATEEVLELRASGSWVSRNVTQLESLTGSACAKLGHAGIVRLDLGSVSEIDTVGAWLIEKL 70

Query: 62  MEKYH---GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
             +      ++++ GV+     L   +   +R++I       +   N        +G+  
Sbjct: 71  SRRAGVGGRRVEMTGVAASYSGLVDEVRQVNRREIA-----PAPRPNPIVARLTDLGRST 125

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +    D      +L  +              +  + SL+ QMY +G   +P+V+LI+F+ 
Sbjct: 126 MGAAKDVTIFLDMLAALSFALVRTLRRPRSLR--VTSLVYQMYRIGWQAIPIVVLITFLI 183

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQG F   +FGAE + +D++ IL LRE+GVL+ A+M+AGRSGSA  AEIGSMK+ 
Sbjct: 184 GAIIAQQGIFHFRRFGAESYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAEIGSMKMR 243

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+ TMGLD V +LI PRI ALI++LP+L  + + +A+ G  +V   Y  +   +F 
Sbjct: 244 EEIDALVTMGLDPVEVLILPRIVALILTLPILAFIGSMAALYGGGLVAQLYGGMGPPIFI 303

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +R H   ++ +   G++KAPFMA  IGIVA  EG  V   + SLG++ TT VV+SI +VI
Sbjct: 304 ARLHEAISVTHFEVGMLKAPFMALVIGIVACSEGLRVKGSAESLGQQTTTSVVKSIFLVI 363

Query: 359 IIDSLFAIFYFAIGI 373
           ++D LFAIF+ +IG+
Sbjct: 364 VLDGLFAIFFASIGM 378


>gi|316935525|ref|YP_004110507.1| hypothetical protein Rpdx1_4222 [Rhodopseudomonas palustris DX-1]
 gi|315603239|gb|ADU45774.1| protein of unknown function DUF140 [Rhodopseudomonas palustris
           DX-1]
          Length = 383

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 126/376 (33%), Positives = 202/376 (53%), Gaps = 11/376 (2%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           ++         +G+W +     +   V  A           +D+S I  +DT GA LI  
Sbjct: 16  IARAEGLALCASGSWTARFAPVLERLVTEAEQLGGSKPDVFIDVSGIARLDTFGAWLIER 75

Query: 61  FME---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
                 +   + ++ G+S +   L   +          ++        + +     +G+ 
Sbjct: 76  LRRNLGQAGAEARIAGLSANYASLVDEVRQVSETGPAPKR------GGALRAPIERLGRT 129

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +  F +D  +   ++G V++  G        F+  L S +  +  V  + VP+++LI+F+
Sbjct: 130 MYAFFDDIVALISMMGAVLAGLGRIVIRPTSFR--LTSTVHHLEQVCWNAVPIILLITFL 187

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G ++AQQG F   +FGA++F +D++ +L LRE+GVLL A+M+AGRSGSA  AE+GSMK+
Sbjct: 188 IGCIVAQQGIFHFRKFGADVFVVDMLGVLVLRELGVLLVAIMVAGRSGSAYTAELGSMKM 247

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EEIDA+RTMG D + +LI PR+ AL++++P+LT L   +A+ G  +V W Y  +    F
Sbjct: 248 REEIDALRTMGFDPIDVLIVPRLIALVLAVPILTFLGAMAALYGGGLVAWLYGGVDPEAF 307

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
             R     ++ +   G+IKAP MA  IGIVA  EG AV   + SLG+  T  VV+SI  V
Sbjct: 308 LLRLRDAISIDHFTVGMIKAPVMAAVIGIVACVEGLAVQGSAESLGRHTTASVVKSIFFV 367

Query: 358 IIIDSLFAIFYFAIGI 373
           I++D +FAIF+  IGI
Sbjct: 368 IVMDGVFAIFFAGIGI 383


>gi|209964745|ref|YP_002297660.1| ABC transporter, permease protein, putative [Rhodospirillum
           centenum SW]
 gi|209958211|gb|ACI98847.1| ABC transporter, permease protein, putative [Rhodospirillum
           centenum SW]
          Length = 384

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 124/369 (33%), Positives = 196/369 (53%), Gaps = 11/369 (2%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           V    G W    +  + D  +        + S  +DLS +  +DT GA LI    E+   
Sbjct: 24  VLAAGGRWDLSAVPRL-DQRLRTAGPDRPASSVCIDLSGLVALDTAGALLIDRLAERLRA 82

Query: 68  K---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
           +   + + G    +  L   +    R             Y    +L   +G+  V+   D
Sbjct: 83  EGHTVAIVGARPDLCALLREVRRASRADSPALP-----RYEPMHDLLERVGRATVEAGQD 137

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           +      LG+V            +F+  +   +  +  VG++ +P+V L+SF+ G V+A 
Sbjct: 138 AAKLLGFLGMVTVTALRLVRQPRRFR--MTPFVFHLEQVGLNALPIVGLLSFLIGIVLAY 195

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QGA QL  FGAEIF ++L+ I  LREIG+L+T++++AGRSGSA  A+IG+MK+N+E+DA+
Sbjct: 196 QGADQLRLFGAEIFVVNLLGIGVLREIGILMTSIIVAGRSGSAFTAQIGTMKVNQEVDAM 255

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           RT+GLD V +L+ PR+ AL+++LPLL   AN  A+ G +++ + Y DI F  F  +    
Sbjct: 256 RTLGLDPVELLVLPRLLALMVALPLLGFYANVVALFGGAVMAYSYLDITFGQFLKQLQLA 315

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
                +F GL+KAP  A  I +V   EG  V   + S+G+  T  VV SI +VI++D+LF
Sbjct: 316 VNETTLFVGLVKAPVFAIVIALVGCYEGLRVTGSAQSVGQLTTRSVVVSIFLVIVLDALF 375

Query: 365 AIFYFAIGI 373
           +I +  +GI
Sbjct: 376 SILFSYLGI 384


>gi|116252407|ref|YP_768245.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115257055|emb|CAK08149.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 389

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 161/373 (43%), Positives = 232/373 (62%), Gaps = 11/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           ++      R  GNW+S  I  +  D    + K  ++    VDLS I+EIDT G  L+   
Sbjct: 23  ADGSGQRVRLQGNWRSAYIHLVLRDFEKLLQK--KTGDLSVDLSDISEIDTAGIWLLCRL 80

Query: 62  M---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
               E     ++ +G ++HI+++  + S    K     +P+++   +    +   IGK  
Sbjct: 81  KKQEEAGGRTVRFEGTNSHIDEMLEMFSEEPAKV----EPEQTEKVSLAARIFAPIGKMT 136

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
            +  ++  +  +ILG  +                  S++ Q+ ++GV  VP+++L+SF+ 
Sbjct: 137 YEVWDNFAAAMYILGSAVRGAQMKFGRGS--GVSPASIVNQIDHMGVRAVPIILLMSFLI 194

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ 
Sbjct: 195 GAIIAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMR 254

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA++ MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA+ V W Y  I FA F 
Sbjct: 255 EEIDALKVMGLNPIGVLIFPRLVALTIALPLLTVLANFASLGGAAAVAWGYSGITFANFL 314

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H   TL+ + +G+IKAPFMA  IGIVA  EG  VG  + SLG+ VT  VV++I +VI
Sbjct: 315 SRLHEAVTLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTAAVVKAIFVVI 374

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 375 LMDGLFAMFYAAI 387


>gi|119945392|ref|YP_943072.1| hypothetical protein Ping_1681 [Psychromonas ingrahamii 37]
 gi|119863996|gb|ABM03473.1| hypothetical protein DUF140 [Psychromonas ingrahamii 37]
          Length = 383

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 110/373 (29%), Positives = 187/373 (50%), Gaps = 10/373 (2%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY--- 60
           +G  +FR  G+W +  +  +   +       + + S   D+S + ++D+ G  L ++   
Sbjct: 18  SGSILFRCQGDWTAKALQNVLRYLEK-EAGILFNMSVQWDVSGVGKVDSAGIMLYIHYHD 76

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
            ++  H  ++L G  +  + L+ L+    R  +  Q   +    +       +IGK    
Sbjct: 77  LLKLQHCTVELTGARSEYQNLYQLL----RSHVSQQAVSKPGLLSRLLLPFTNIGKSTEN 132

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
              D       +G   +            +    S+++ +   GV  +P+V L S + G 
Sbjct: 133 LWRDINDFLTFIGEHSAALLTSLRHPSSIR--YASIVKNIEEAGVRALPIVALTSCLIGV 190

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           VI  Q A QL +FGA IF +D++ I   RE+  L+TA+++AGR+GS+  A++G+M I EE
Sbjct: 191 VITYQSALQLQKFGANIFIVDMIGISVTRELAPLITAIVVAGRTGSSYTAQLGAMTITEE 250

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           I A+RTMG +  R L+ PRI AL+I +PLL + A+   I G  IV   + +I +A F  R
Sbjct: 251 ISAMRTMGFEPHRFLVLPRIIALMIVMPLLILFADVIGIAGGMIVSNIHLNISYAEFIHR 310

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                 + +++ GL K PF A  I I     GF V  ++ SLG+  T  VV +I +VI  
Sbjct: 311 LQHVLDIKHLWIGLFKGPFFAWLIAITGCFRGFQVASNTESLGRYTTISVVNAIFLVIAC 370

Query: 361 DSLFAIFYFAIGI 373
           D+LF++ +  +G+
Sbjct: 371 DALFSVIFTELGL 383


>gi|222086200|ref|YP_002544732.1| ABC transporter [Agrobacterium radiobacter K84]
 gi|221723648|gb|ACM26804.1| ABC transporter [Agrobacterium radiobacter K84]
          Length = 386

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 154/372 (41%), Positives = 232/372 (62%), Gaps = 10/372 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +     +R  GNW+S  +  +   +     +S      ++DLS ++++DT GA LI    
Sbjct: 20  DGNGHRYRLEGNWRSANVHGVLRRIDELTTRSAGGR-VVIDLSDLSDVDTAGALLIRRLK 78

Query: 63  E---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
           E    +   + ++G ++HI++L +       +    +KP+     +  + +   IG+ + 
Sbjct: 79  ESQEAHGASVSIEGSNSHIDELLTAF----TEDPDAEKPEPRQKKSWTERIFAPIGETVY 134

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           +   +  +  +ILG  +                  S++ Q+ ++GV  VP+++L+S++ G
Sbjct: 135 EVWGNLVAAMYILGSAVRGAQLKFGRGS--GVSPASIVNQIDHMGVRAVPIILLMSYLIG 192

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           A+IAQQGAFQL  FGAE+F +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ E
Sbjct: 193 AIIAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMRE 252

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DA++ MGL+ + +LI PR+ AL ++LPLLTILANF+++ GA+ V W Y  I FA F +
Sbjct: 253 EVDALKVMGLNPIGVLIFPRLVALTVALPLLTILANFASLFGAATVTWAYSGITFATFIA 312

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           R H   +L+ + +G+IKAPFMA  IGIVA  EG  VG  + SLG+ VT  VV+SI +VI+
Sbjct: 313 RLHEAISLSTVISGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTASVVKSIFVVIL 372

Query: 360 IDSLFAIFYFAI 371
           +D LFA+FY AI
Sbjct: 373 MDGLFAMFYAAI 384


>gi|323136828|ref|ZP_08071909.1| protein of unknown function DUF140 [Methylocystis sp. ATCC 49242]
 gi|322398145|gb|EFY00666.1| protein of unknown function DUF140 [Methylocystis sp. ATCC 49242]
          Length = 380

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 131/368 (35%), Positives = 206/368 (55%), Gaps = 5/368 (1%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           NG      +G+W       +       +++  +     +DLS + ++DT GA LI     
Sbjct: 16  NGGERLALSGDWILIASRRLEQKAQQLVDEGGRVKFVTIDLSGVEKLDTAGAWLINRARH 75

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           +         ++    +  +++     ++ +    +R   +N+  +L   +G  +V  + 
Sbjct: 76  ELAHADVGVALAHARPEHHTMLEEAAFREFEKPPRRR---FNAIVDLLADLGASVVDALR 132

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
           +       LG  I+           F+    SL+  M  +G    P+++LI+ + GA++A
Sbjct: 133 EFYRGVAFLGEFIAAMAYVATHPGHFR--FTSLVFHMETIGFRSAPIIVLINLLVGAIVA 190

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           QQG FQL +FGA  +++ L+ IL LRE+GVLLT++MIAGRSGSAI AEIGSMK+ EEIDA
Sbjct: 191 QQGIFQLLKFGASSYTVSLIGILVLRELGVLLTSIMIAGRSGSAITAEIGSMKMREEIDA 250

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R MGL  + +LI+PR+ ALI+SLP+LT +A+ +A+ G  +V W Y  I  A F S    
Sbjct: 251 LRVMGLSPIEVLIAPRVLALIVSLPILTFIADMAALFGGLLVSWSYGGISPAAFLSLLKE 310

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              L     G+IKAPFMA  IG++A  +G      + SLG++VT+ VV+SI +VI++D L
Sbjct: 311 AIALHTFLVGMIKAPFMALVIGLIAAMDGLETKGSAESLGRQVTSSVVKSIFMVIVLDGL 370

Query: 364 FAIFYFAI 371
           FAIF+ +I
Sbjct: 371 FAIFFASI 378


>gi|209549578|ref|YP_002281495.1| hypothetical protein Rleg2_1984 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209535334|gb|ACI55269.1| protein of unknown function DUF140 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 383

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 158/367 (43%), Positives = 227/367 (61%), Gaps = 11/367 (2%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EK 64
             R  GNW+S  +  +  D    +++  ++    VDLS IT+IDT G  L+       E 
Sbjct: 23  HVRLKGNWRSAYVHFVLRDFEKLLHQ--KAGDLTVDLSDITDIDTAGIWLLCRLKKEEEA 80

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
               ++ +G + HI+++  + S    K     +P+     +    +   IG+      ++
Sbjct: 81  AGRTVRFEGTNPHIDEMLEMFSEEPAK----PEPELKEKVSLAARILAPIGRMTYDIWDN 136

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +  +ILG  +                  S++ Q+ ++GV  VP+++L+SF+ GA+IAQ
Sbjct: 137 FAAAMYILGSAVRGAQMKFGRGS--GVSPASIVNQIDHMGVRAVPIILLMSFLIGAIIAQ 194

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QGAFQL  FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ EEIDA+
Sbjct: 195 QGAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMREEIDAL 254

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           + MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA+ V W Y  I FA F SR H  
Sbjct: 255 KVMGLNPIGVLIFPRLVALTIALPLLTVLANFASLAGAAAVAWGYSGITFANFLSRLHEA 314

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            TL+ + +G+IKAPFMA  IGIVA  EG  VG  + SLG+ VT  VV++I +VI++D LF
Sbjct: 315 VTLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTAAVVKAIFVVILMDGLF 374

Query: 365 AIFYFAI 371
           A+FY AI
Sbjct: 375 AMFYAAI 381


>gi|92116871|ref|YP_576600.1| hypothetical protein Nham_1315 [Nitrobacter hamburgensis X14]
 gi|91799765|gb|ABE62140.1| protein of unknown function DUF140 [Nitrobacter hamburgensis X14]
          Length = 377

 Score =  305 bits (781), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 135/376 (35%), Positives = 206/376 (54%), Gaps = 11/376 (2%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           +++        AG W +     +   V  A   +    +  +D+S I+ +DT GA LI  
Sbjct: 10  IAQGDGLALCAAGPWTARFAPALERIVADAEKLAGSRPNIFIDVSQISRLDTFGAWLIER 69

Query: 61  FMEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
                     + K+ G+S +     SL+    R    +  P R     +   L   +G+ 
Sbjct: 70  LRRSLTQGGVEAKIAGLSLNYS---SLVDEVRRVPAADPAPARQ---RALTGLIEDVGRN 123

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +V F         +LG V++ +G        F+  L S +  +  V    VP+V+LI+F+
Sbjct: 124 VVGFGTTLTGLIGMLGAVLAASGRVMRHPRSFR--LTSTVHHLEQVCWRAVPIVVLITFL 181

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G +I+QQG F   +FGA+IF +D++ +L LREIGVLL A+M+AGRSGSA  AE+GSMK+
Sbjct: 182 IGCIISQQGIFHFRKFGADIFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMKM 241

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EEIDA+RTMG D + +L+ PR+ AL+I+LP+L  L   +A+ G  +V W Y  +    F
Sbjct: 242 REEIDALRTMGFDPIEVLVLPRMLALVIALPILAFLGAIAALYGGGLVAWLYGGVQPEAF 301

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
             R     ++ +   G+IKAP MA  IGIVA  EG AV   + SLG++ T+ VV+ I  V
Sbjct: 302 LIRLRDAISIDHFVVGMIKAPVMAAVIGIVACVEGLAVEGSAESLGQRTTSSVVKGIFFV 361

Query: 358 IIIDSLFAIFYFAIGI 373
           I++D +FAIF+ +IG+
Sbjct: 362 IVMDGVFAIFFASIGM 377


>gi|110633893|ref|YP_674101.1| hypothetical protein Meso_1540 [Mesorhizobium sp. BNC1]
 gi|110284877|gb|ABG62936.1| protein of unknown function DUF140 [Chelativorans sp. BNC1]
          Length = 395

 Score =  305 bits (781), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 159/370 (42%), Positives = 217/370 (58%), Gaps = 3/370 (0%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ENG  V R +GNW +  +S + DD +  +         I+DL  +  +DT GA L+   
Sbjct: 27  EENGALVCRLSGNWTTRTVS-LVDDPMRRLRARKGLTHFIIDLGDVGHLDTAGAWLVSRL 85

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
                       +S   E    L++       +   P+     N   N+   +G+ I   
Sbjct: 86  AAAQKENGAQVEISGQSEAASILLAAIEPTAQEPDVPKDGRRGNLIVNILAAMGRTIYDI 145

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
            +D     HILG  IS         +       ++  Q+  +GV  +P+++L+S V GA+
Sbjct: 146 KDDVLYGMHILGATISGAQMKLGRGHAVNP--AAIANQIDRMGVGSIPIIVLMSAVVGAI 203

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IAQQGAFQL  FGAEI+ +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE+
Sbjct: 204 IAQQGAFQLRWFGAEIYVVDLVGILILRELGVLLTAIMIAGRSGSAITAEIGSMKMREEV 263

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  +GL+ V +L+ PR+ AL++++P LTI+ANFSA+ GA +V W Y DI  A F  R 
Sbjct: 264 DALTVIGLNPVGVLVFPRLVALVVAVPCLTIVANFSALGGAILVAWLYSDIMPATFIQRL 323

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           H    L +IF GLIKAPFMA  IGI+A  EG  VG  + SLGK VT  VV++I +VI+ID
Sbjct: 324 HDAIDLTSIFAGLIKAPFMALIIGIIASVEGMKVGGSAESLGKHVTASVVKTIFLVIVID 383

Query: 362 SLFAIFYFAI 371
            LFA+FY AI
Sbjct: 384 GLFAMFYAAI 393


>gi|209884491|ref|YP_002288348.1| ABC transporter permease protein [Oligotropha carboxidovorans OM5]
 gi|209872687|gb|ACI92483.1| ABC transporter permease protein [Oligotropha carboxidovorans OM5]
          Length = 378

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 132/369 (35%), Positives = 201/369 (54%), Gaps = 12/369 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINK-SIQSDSAIVDLSAITEIDTIGAELIMYFME---K 64
            R AG W       +   V         ++ + ++D+S ++ +DT GA LI        +
Sbjct: 18  LRAAGEWTVHHAPALEKLVEHTERAGKSRNAALVIDVSQVSRLDTFGAWLIERLRRAQIR 77

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
                 + G+S       SL+    R K    +P+ +F           +G+ +V+    
Sbjct: 78  GDVAPPIAGLSADYA---SLVEEVKRVKAPPVQPRPAFGP---IRAVEAVGRSVVEVGQT 131

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             S  +++G V+            F+    S I  +  V    VP+V+LI+F+ G +IAQ
Sbjct: 132 LLSLLNMMGSVLHALWRVILHPSHFR--FTSTIHHLEQVCWRAVPIVLLITFLIGCIIAQ 189

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG FQ  +FGA++F +D++ +L LREIGVLL A+M+AGRSGSA  AE+GSM++ EE+DA+
Sbjct: 190 QGIFQFRKFGADVFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMRMREEVDAL 249

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           RTMG D   +LI PRI ALII++P+L  L   +A+ G  +  W Y  +    F +R    
Sbjct: 250 RTMGFDPTEVLILPRILALIIAMPILAFLGAMAALYGGGLTAWLYGGVQPDAFLARLREA 309

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            ++ +   GL+KAPFMA  IGI+A  EG AV   + SLG+  T  VV+SI  VI++D +F
Sbjct: 310 ISINHFTVGLVKAPFMALIIGIIACVEGAAVRGSAESLGQHTTASVVKSIFFVIVVDGIF 369

Query: 365 AIFYFAIGI 373
           AIF+ +IG+
Sbjct: 370 AIFFASIGV 378


>gi|90425518|ref|YP_533888.1| hypothetical protein RPC_4043 [Rhodopseudomonas palustris BisB18]
 gi|90107532|gb|ABD89569.1| protein of unknown function DUF140 [Rhodopseudomonas palustris
           BisB18]
          Length = 378

 Score =  304 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 132/376 (35%), Positives = 206/376 (54%), Gaps = 10/376 (2%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           +S     + R  G+W +   + +     +   +  Q+ +  +DL+ + EIDT+GA L+  
Sbjct: 10  ISTGDGLLLRPTGSWTAVHAAALEHLFDVVAPQLRQAKALTIDLAELHEIDTLGAWLLEK 69

Query: 61  FMEKYHG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
              +         + G +     L   +   +R+     +P  +   +        IG+ 
Sbjct: 70  ISRRAAQAGHPASVVGAAERYAGLIDQVRQVNRR-----QPANAVRGSLILTRLEDIGRA 124

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
                 D  +   + G + +            +  L SL+ Q+Y VG   +P++ LI+F+
Sbjct: 125 TWGAREDLFAFLQMTGALANALLGVLRRPRSLR--LTSLVYQIYRVGWQAIPIIGLITFL 182

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            GA+IAQQG F   +FGAE + +D++ IL LRE+GVL+ A+M+AGRSGSA  AE+GSMK+
Sbjct: 183 IGAIIAQQGIFHFRKFGAESYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAELGSMKM 242

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EEIDA+ TM LD V +LI PR+ ALII+LP+L  L   +A+ G  +V W Y  +   +F
Sbjct: 243 REEIDALSTMDLDPVEVLILPRVIALIIALPILAFLGAMAALYGGGLVAWFYGGMSPTIF 302

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            +R H   ++ +   G+IKAPFMA  IGIVA  EG  V   + SLG++ T  VV+SI  V
Sbjct: 303 IARLHEAVSITHFEVGIIKAPFMALVIGIVACSEGLRVMGSAESLGRQTTASVVKSIFCV 362

Query: 358 IIIDSLFAIFYFAIGI 373
           I++D LFA+F+ +IG+
Sbjct: 363 IVLDGLFAVFFASIGM 378


>gi|148257023|ref|YP_001241608.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146409196|gb|ABQ37702.1| putative ABC transporter (permease protein) [Bradyrhizobium sp.
           BTAi1]
          Length = 378

 Score =  304 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 136/368 (36%), Positives = 211/368 (57%), Gaps = 10/368 (2%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R +G+W S  ++E+ +    A  K   + +  +DL A++EIDT+G  L+          
Sbjct: 18  LRPSGSWVSLNVTELENLTRSASGKVGNAKAVKLDLGAVSEIDTVGVWLLEKLSRSAAAG 77

Query: 69  ---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
              +++ GV+ +   L   +   +R+ I           N        +G+  +    D 
Sbjct: 78  GRLVEMTGVAENYVGLVEEVRQVNRRDIAPPP-----RQNPIVAKLTDLGRSTLGAARDV 132

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                +L  +        A     +  + SL+ QMY +G   +P+V+LI+F+ GA+IAQQ
Sbjct: 133 TVFLDMLAALSLALVRTLARPRSLR--VTSLVYQMYRIGWQAIPIVVLITFLIGAIIAQQ 190

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           G F   +FGAE + +D++ IL LRE+GVL+ A+M+AGRSGSA  AE+GSMK+ EEIDA+ 
Sbjct: 191 GIFHFRRFGAESYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAELGSMKMREEIDALV 250

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           TMGLD V +LI PRI ALI++LP+L  + + +A+ G  +V   Y  +  A+F +R H   
Sbjct: 251 TMGLDPVEVLILPRIVALILTLPILAFIGSMAALYGGGLVAQLYGGMGPAIFIARLHDAV 310

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           ++ +   G+ KAPFMA  IGIVA  EG  V   + SLG++ TT VV+SI +VI++D LFA
Sbjct: 311 SVTHFEVGMWKAPFMALVIGIVACSEGLRVKGSAESLGQQTTTSVVKSIFLVIVLDGLFA 370

Query: 366 IFYFAIGI 373
           +F+ +IG+
Sbjct: 371 VFFASIGL 378


>gi|229587675|ref|YP_002869794.1| putative ABC transporter permease [Pseudomonas fluorescens SBW25]
 gi|229359541|emb|CAY46382.1| putative ABC transport system, permease [Pseudomonas fluorescens
           SBW25]
          Length = 382

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 120/365 (32%), Positives = 197/365 (53%), Gaps = 5/365 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R  G+W     + +   +   ++    +  A +DL+ +  +DT GA L++  +     +
Sbjct: 21  LRITGDWTLAHYASL-KKLSDKLDGQYDAG-ARIDLNGLGALDTAGASLLVELLGPTRIE 78

Query: 69  IKLQGVSTHI-EQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
              +     +     +L+   +R       P+++    +   +   IG+ +     DS  
Sbjct: 79  QSAEQTDCSLSAADRALLKTVYRSLNDFCVPEKAPEEAAGIQVLARIGRAVDTVWQDSKQ 138

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +GL++           +++  L  ++  +  VG+   P+V L++F+ GAV+A  GA
Sbjct: 139 LLGFIGLILETFARGIFRPRRWR--LTPMVAHLEQVGLDAAPIVALLTFLVGAVVAFLGA 196

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L  FGA IF++DL++   LRE GVLLTA++IAGR+ SA  A+IGSMK NEEIDAIRT+
Sbjct: 197 TVLKSFGATIFTVDLVAFSFLREFGVLLTAILIAGRTASAFTAQIGSMKANEEIDAIRTL 256

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GLD + +L+ PR+ AL+++LP+LT LA  S I+G  +V     DI  A+F S   S   +
Sbjct: 257 GLDPMELLVLPRVLALLVALPMLTFLAMLSGIVGGGVVCAVALDISPAMFLSLLQSDIGV 316

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   GL+KAP  A  I  +   EGF V   + S+G   T+ VVQSI +VI++D++ A+F
Sbjct: 317 QHFLVGLVKAPIFAFLIAAIGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVLDAVAALF 376

Query: 368 YFAIG 372
           +  +G
Sbjct: 377 FMEMG 381


>gi|299131823|ref|ZP_07025018.1| protein of unknown function DUF140 [Afipia sp. 1NLS2]
 gi|298591960|gb|EFI52160.1| protein of unknown function DUF140 [Afipia sp. 1NLS2]
          Length = 383

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 131/369 (35%), Positives = 193/369 (52%), Gaps = 12/369 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAIN-KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
            R  G W       +   V      +     S ++D+S I+ +DT GA LI         
Sbjct: 23  LRAGGEWTVHHAPALEKLVERTERSRDGSRASLVIDVSQISRLDTFGAWLIERLRRALTR 82

Query: 68  KIK---LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
                 + G+S     L   +          + P               +G+ +V   + 
Sbjct: 83  GDTAPMIAGLSADYASLVEEVKRVKAVPEPAKVPFGPV------RAVEAVGRTVVGVADT 136

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                ++ G ++S           F+  L S + Q+  V    VP+V+LI+F+ G +IAQ
Sbjct: 137 LLGLLNMTGSILSAFWRVILHPSHFR--LTSTVHQLEQVCWRAVPIVVLITFLIGCIIAQ 194

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG FQ  +FGA++F +D++ +L LREIGVLL A+M+AGRSGSA  AE+GSM++ EE+DA+
Sbjct: 195 QGIFQFRKFGADVFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMRMREEVDAL 254

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           RTMG D   +LI PRI AL+I++P+L  L   +A+ G  +  W Y  +    F SR    
Sbjct: 255 RTMGFDPTEVLILPRILALVIAMPILAFLGAMAALYGGGLTAWLYGGVQPDAFLSRLREA 314

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            ++ +   GL+KAPFMA  IGI+A  EG AV   + SLGK  T  VV+SI  VI++D LF
Sbjct: 315 ISINHFTVGLVKAPFMALIIGIIACVEGAAVQGSAESLGKHTTASVVKSIFFVIVVDGLF 374

Query: 365 AIFYFAIGI 373
           AIF+ +IG+
Sbjct: 375 AIFFASIGV 383


>gi|307297001|ref|ZP_07576817.1| protein of unknown function DUF140 [Sphingobium chlorophenolicum
           L-1]
 gi|306877527|gb|EFN08755.1| protein of unknown function DUF140 [Sphingobium chlorophenolicum
           L-1]
          Length = 376

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 114/370 (30%), Positives = 197/370 (53%), Gaps = 14/370 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
             G TV R +GN     + ++ + +      +I+     +DLS +  +DTIGA ++   +
Sbjct: 19  REGRTVIRLSGNLSIACLHDLPNRL-----DAIEGPVDTIDLSGVDHMDTIGAWVLHRTI 73

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++     K+ G     E+L + +              R      ++ +   IG+ +V   
Sbjct: 74  KRL--DCKITGDKCDAERLITTVGSVDE-----PVNIRPDHEPPWQRVVGQIGEAVVNSG 126

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                     G  +  T        +F+  + +++++   VGVS + ++ L+SF+ G VI
Sbjct: 127 TTLLGLLGFFGGTLVATWNVIRHPGRFR--INAVVQRFEVVGVSALGIIGLMSFLIGIVI 184

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQG+ QL QFG E+ +I+L+  L  RE+GVL+TA+M+AGRSGSA  A++G+MK+ EE+D
Sbjct: 185 AQQGSVQLRQFGMEMLTINLVGRLTFRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEVD 244

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+RT+G+  +  L+ PR  A+++ +PLL+  A+  AIIG   +     DIP   F  R  
Sbjct: 245 AMRTIGVSPMEALVLPRTLAVVVMMPLLSFYASIVAIIGGGFLCAVSLDIPPITFVQRLR 304

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               + +++ GLIKAP     I +    +G  V  ++  +G + T  VVQ+I +VI++D+
Sbjct: 305 EVVPIHDLWVGLIKAPVFGVIIALAGCFQGMQVKANAEEVGLRTTAAVVQAIFLVIVLDA 364

Query: 363 LFAIFYFAIG 372
            FA+F+  +G
Sbjct: 365 FFAVFFTWVG 374


>gi|154248034|ref|YP_001418992.1| hypothetical protein Xaut_4113 [Xanthobacter autotrophicus Py2]
 gi|154162119|gb|ABS69335.1| protein of unknown function DUF140 [Xanthobacter autotrophicus Py2]
          Length = 474

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 134/372 (36%), Positives = 200/372 (53%), Gaps = 7/372 (1%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S++        G W S    E+   V              +DLSA+  +DT GA L    
Sbjct: 110 SQDDRLTVAGRGAWTSEYADELEQAVDDTARSYANPKGIEIDLSAVERMDTFGALLFERL 169

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
              + G      V     +   LI    R   +   P R       + +    G + V  
Sbjct: 170 KRSWKGTGVEPQVKGLAPRYKVLIEEMGRMGQEQPPPARRH-----EAILERFGHETVNV 224

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             D+ +  + +G  ++  G        F+    +++ QM  VG+  VP+++LI+F+ G +
Sbjct: 225 AADAAALLNFVGASVAAMGRVLLRPRSFR--FTAMVNQMDRVGLRAVPIIVLITFLIGCI 282

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +AQQG F   +FGA+I+ +D++ +L LRE+GVL+ A+MIAGRSGSA  AE+GSM++ EEI
Sbjct: 283 LAQQGIFNFRRFGADIYVVDMVGVLVLRELGVLIVAIMIAGRSGSAYTAELGSMRMREEI 342

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+R MG D V +L+ PR+ ALII+LPLLT + + S+++GA +V W Y  I   VF  R 
Sbjct: 343 DALRVMGFDPVEVLVVPRLLALIIALPLLTFIGSMSSLLGAGLVSWGYGGITPDVFLDRL 402

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                +     G+IKAPFMA  IGIVA  EG  VG  + SLG   T  VV++I +VI++D
Sbjct: 403 KGAIDMDQFNVGMIKAPFMAATIGIVACLEGLRVGGSAESLGAHTTASVVKAIFLVIVMD 462

Query: 362 SLFAIFYFAIGI 373
            +FA+F+ AI +
Sbjct: 463 GVFAMFFAAIDM 474


>gi|58580429|ref|YP_199445.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|58425023|gb|AAW74060.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 398

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 120/364 (32%), Positives = 193/364 (53%), Gaps = 13/364 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R AG+W        A+     + +++      +D   I ++D+ G   ++ F  +   K
Sbjct: 47  LRLAGSWVLATALPQAE-----LLQTVPDGVRRIDARGIQQLDSAGVLQLLRFASRIGLK 101

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
                     +   +L+        +  KP+R +    F      +G+   +   D    
Sbjct: 102 EDAIDFRDEHQ---ALVCTIEELNDERPKPKRDY---GFVAALDRLGRATHRIGQDILEL 155

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG  +           +F+  L S +  M  VG+  VP+V+L+S++ GAVIA  G+ 
Sbjct: 156 NSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFLGST 213

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAIRT+G
Sbjct: 214 ILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIRTLG 273

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD + +L+ PR+ ALI +LPLLT +A  + + G   V     DIP  ++ +R H T  L 
Sbjct: 274 LDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHETIQLR 333

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ A+++
Sbjct: 334 HFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWF 393

Query: 369 FAIG 372
             +G
Sbjct: 394 MKMG 397


>gi|254512708|ref|ZP_05124774.1| ABC transporter, inner membrane subunit [Rhodobacteraceae bacterium
           KLH11]
 gi|221532707|gb|EEE35702.1| ABC transporter, inner membrane subunit [Rhodobacteraceae bacterium
           KLH11]
          Length = 374

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 128/371 (34%), Positives = 206/371 (55%), Gaps = 13/371 (3%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
               R  G+ ++ E+ ++  D            + ++D+S +  +DT GA LI   + + 
Sbjct: 14  GVHIRITGDLRTQELDDVEADFGKL---RPSGQNVVLDMSQLQSLDTGGAWLIADLVRRL 70

Query: 66  HG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                +++ +G       L   +S    + + +Q P R             IG++     
Sbjct: 71  GSDSSQVQFEGAKPAHASLIETVSKNIPQAVGDQAPAR-----GVVVWVSRIGERTFGAW 125

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
            D+ S    LGL +          ++ +    +L+ QM  VG   +P+V L+ F+ G V+
Sbjct: 126 EDTLSIMGFLGLTLHRLVRTLIMPWRLRR--AALVSQMEQVGFKALPIVALMGFLIGVVL 183

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL QFGAEIF ++L+SI  LRE+G+LLTA+++AGRSGSA  A IGSMK+ EEID
Sbjct: 184 AFQGATQLKQFGAEIFVVELISISILRELGILLTAIIVAGRSGSAFTASIGSMKVQEEID 243

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+RT+GLD + +L+ PR+ AL+I LP+L  +A+ + +IG +++ W    +   +F +R  
Sbjct: 244 AMRTLGLDPIEVLVIPRVLALLIMLPILGFIADMAGLIGGALMSWIDLGVSPGMFLTRLK 303

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               +A +  G+IKAPF A  IG++A  +   V   S S+G++ T  VVQSI +VI ID+
Sbjct: 304 ENTGVAQLAVGMIKAPFFALVIGVIACWQAMQVKGSSESVGQRTTASVVQSIFMVIAIDA 363

Query: 363 LFAIFYFAIGI 373
           LF+IF+  +G+
Sbjct: 364 LFSIFFSELGV 374


>gi|149374946|ref|ZP_01892719.1| putative permease of ABC transporter [Marinobacter algicola DG893]
 gi|149360835|gb|EDM49286.1| putative permease of ABC transporter [Marinobacter algicola DG893]
          Length = 374

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 117/364 (32%), Positives = 198/364 (54%), Gaps = 4/364 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
              +G+W  P    +  DV  A+ K +  D   V+L+ I  +DT GA L++  +  +   
Sbjct: 14  LTVSGDWTLPNYGSLKRDVQNAVLKEV-PDGHSVNLATINALDTAGASLLVDLLGAHELH 72

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
              +       +   L+       + + + +++F  N        IG+ I  F +     
Sbjct: 73  ELTEQTPELSSERQELLRLV-ANAMASPEGEKAFCSNPITEFLAGIGENIEDFWHQQRLL 131

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
               G +++      A+ ++++  + SL+  ++  G++ +P+V L++F+ GAV+A  GA 
Sbjct: 132 IGFTGQILATLASILATPWRWR--ITSLVAHVHQTGLNALPIVALLTFLVGAVVAFLGAT 189

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L  FGA I++++L++   LRE GVLL A+++AGR+ SA  A++GSMK NEEIDA+RT G
Sbjct: 190 ILDDFGATIYTVNLVAFSFLREFGVLLAAILLAGRTASAFTAQLGSMKANEEIDALRTFG 249

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           L  V +L+ PR+ A++ISLP+LT +   S IIG S+V     DI      +   +   + 
Sbjct: 250 LSPVELLVIPRVLAMVISLPILTFVGMISGIIGGSVVCVLALDISVPQILNILETKVKVV 309

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           ++  GL KAP  A  I ++   EGF     + S+G+  T+ VVQSI +VI++DS+ AIF+
Sbjct: 310 HLLVGLGKAPVFAFVIAVIGCLEGFKASGSAQSVGEHTTSAVVQSIFMVILLDSIAAIFF 369

Query: 369 FAIG 372
             +G
Sbjct: 370 MEMG 373


>gi|87200858|ref|YP_498115.1| hypothetical protein Saro_2845 [Novosphingobium aromaticivorans DSM
           12444]
 gi|87136539|gb|ABD27281.1| protein of unknown function DUF140 [Novosphingobium aromaticivorans
           DSM 12444]
          Length = 372

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 117/371 (31%), Positives = 194/371 (52%), Gaps = 13/371 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            +       F+G      +      +     + I    A +DLSA+T +DT+GA  +   
Sbjct: 13  GQGAGATLAFSGPMTVSSLGLTDQRL-----RHITDPVARIDLSAVTAMDTVGAWTVWRL 67

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
                   ++   S   ++L   IS         + P+       F+ +   +G  ++  
Sbjct: 68  SRDTGA--EIVACSEEAQKLVDAISKADSNAHSIEPPR----LPLFQRVPEKVGDAMIGL 121

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
              +      LG VI   G       +F+  + +L+ QM  VGV+ + ++ L+SF+ G V
Sbjct: 122 GLGAVQVLGFLGQVILAIGTLVRHPSRFR--MKALVHQMELVGVNALAIIGLMSFLVGIV 179

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IAQQGA QL QFGAEI++++L+  L LRE+GVL+TA+M+AGRSGSA  A++G+MK+ EE+
Sbjct: 180 IAQQGAVQLRQFGAEIYTVNLVGRLTLRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEV 239

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+RT+G+  +  L+ PRI A ++ +PLL   + F  IIG + +      IPF  F +R 
Sbjct: 240 DAMRTIGVSPMEALVVPRILATMVMMPLLGFYSAFIGIIGGAFLSSLTLGIPFFTFLARI 299

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                L +++ G+ KAP     + +    +G  V  ++  +G + T  VV +I +VI++D
Sbjct: 300 QEVVPLHDVWVGITKAPVFGLIVAVAGCYQGMQVKTNAEEVGTRTTAAVVMAIFMVIVLD 359

Query: 362 SLFAIFYFAIG 372
           + FA+F+  IG
Sbjct: 360 AFFAVFFTEIG 370


>gi|260430754|ref|ZP_05784726.1| ABC transporter, inner membrane subunit [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260418195|gb|EEX11453.1| ABC transporter, inner membrane subunit [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 374

 Score =  302 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 123/373 (32%), Positives = 199/373 (53%), Gaps = 13/373 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           N       +G   +  +  +             +   + DLS +  +DT GA LI     
Sbjct: 12  NDALRIAVSGEMVTQSLESVEKGFRAL---HPDAKRIVFDLSGLGSLDTGGAWLICDLAR 68

Query: 64  KY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
           +       +  + V+     L   ++     +I  + P R F           +G++ V 
Sbjct: 69  RASAAGATVTYENVTATQSALLETVAQNIAAEIPAEAPPRGFVP-----WLESLGRRTVG 123

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
              D+ S    LGL +          ++ +    +L+ QM   G+  +P+V L+ F+ G 
Sbjct: 124 AGRDTASMLSFLGLTLHRLARTLVMPWRLRR--AALVSQMEETGLKALPIVALMGFLIGV 181

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A QGA QL QFGAEIF ++L+SI  LRE+GVLLTA+++AGRSGSA  A IGSMK+ EE
Sbjct: 182 VLAFQGATQLKQFGAEIFVVELISISVLRELGVLLTAIIVAGRSGSAFTASIGSMKVQEE 241

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA++T+GLD + +L+ PR+ AL+I LP+L  +A+ + + G +++ W    +   +F +R
Sbjct: 242 IDAMQTLGLDPIEVLVVPRVLALLIMLPILGFVADMAGLFGGALMSWIDLGVSPGMFVTR 301

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                 + ++  GLIKAPF A  I ++A  +   V   S S+G++ T+ VVQ+I +VI I
Sbjct: 302 LKENTDVWHLAVGLIKAPFFAVVIAVIACWQAMQVKGSSQSVGQRTTSSVVQAIFMVIAI 361

Query: 361 DSLFAIFYFAIGI 373
           D+LF+IF+  +G+
Sbjct: 362 DALFSIFFSEVGV 374


>gi|27381176|ref|NP_772705.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354343|dbj|BAC51330.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 378

 Score =  302 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 132/368 (35%), Positives = 207/368 (56%), Gaps = 10/368 (2%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY--- 65
            R  G+W +  ++ +            +S +  +D+S ++ +DT+GA ++     +    
Sbjct: 18  LRPQGSWTAANVAMLETLSRSVGADVDRSRAVTLDMSGVSALDTLGAWVLEKLSRRAATS 77

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
               +  GV+ H   L   +   +R          +   N        +GK  V    D 
Sbjct: 78  GRSAEFVGVADHFSGLMDEVREVNRHTPAP-----AAAPNPLLLRLGDLGKSTVGAREDI 132

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                +LG +              +  L SL+ Q+Y +G   +P+V LI+F+ GA+IAQQ
Sbjct: 133 TIFLQMLGALFMAIFGVLRRPRSLR--LTSLVYQLYRIGWQAIPIVALITFLIGAIIAQQ 190

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           G F   +FGAE +++D++ IL LRE+GVL+ A+M+AGRSGSA  AE+GSMK+ EEIDA+ 
Sbjct: 191 GFFHFRRFGAESYTVDMVGILVLRELGVLIVAIMVAGRSGSAYTAELGSMKMREEIDALS 250

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           TMGLD V +LI PR+ AL+I+LP+L  + + +A+ G  +V   Y D+  A++ +R H   
Sbjct: 251 TMGLDPVGVLILPRVAALVIALPILAFIGSIAALYGGGLVAQFYGDMGPAIYIARLHEAI 310

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           ++ +   G++KAPFMA  IGIVA  EG  V   + SLG++ TT VV+SI +VI++D LFA
Sbjct: 311 SVTHFEVGILKAPFMALVIGIVACSEGLRVKGSAESLGRQTTTSVVKSIFLVIVLDGLFA 370

Query: 366 IFYFAIGI 373
           IF+ +IG+
Sbjct: 371 IFFASIGM 378


>gi|158423837|ref|YP_001525129.1| hypothetical protein AZC_2213 [Azorhizobium caulinodans ORS 571]
 gi|158330726|dbj|BAF88211.1| protein of unknown function [Azorhizobium caulinodans ORS 571]
          Length = 408

 Score =  302 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 134/365 (36%), Positives = 207/365 (56%), Gaps = 13/365 (3%)

Query: 12  AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK--- 68
            G W S     +   V+   +   ++ +  +DLS +  +DT GA L+      +  K   
Sbjct: 54  QGAWTSEYADSLEQAVMQVASHYGEAKAVEIDLSRLDRMDTFGALLLERLRRVWQEKGVE 113

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
            ++ G++     L   ++ T R+                  +   IG+++V    D+ S 
Sbjct: 114 PQIVGLNPAYSVLIEEMTRTGREPP--------PPERKPPGVFERIGREMVVITEDAVSL 165

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
            + +G V++  G        F+    S++ QM  VG   +P++ILI+F+ G +IAQQG F
Sbjct: 166 LNFVGAVVAAFGRVLTRPRSFR--FTSMVNQMDRVGFRAMPIIILITFLIGCIIAQQGIF 223

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
              +FGA+I+ +D++ +L LRE+GVL+ ++MIAGRSGSA  AE+GSM++ EE+DA+R MG
Sbjct: 224 NFRRFGADIYVVDMVGVLVLRELGVLIVSIMIAGRSGSAYTAELGSMRMREEVDALRVMG 283

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
            D V +L+ PR+ ALII LPLLT + + +A+IG  +V W Y  I   VF +R     TLA
Sbjct: 284 FDPVEVLVVPRLLALIICLPLLTFVGSMAAMIGGGLVAWFYGGIAPDVFINRLKDAITLA 343

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
               G+IKAPFMA  IG+V   EG  VG  + SLG+  T  VV++I +VI++D LFAIF+
Sbjct: 344 QFEVGMIKAPFMAAIIGVVGCMEGLRVGGSAESLGQHTTASVVKAIFLVIVVDGLFAIFF 403

Query: 369 FAIGI 373
            +I +
Sbjct: 404 ASIDM 408


>gi|114798707|ref|YP_761599.1| hypothetical protein HNE_2921 [Hyphomonas neptunium ATCC 15444]
 gi|114738881|gb|ABI77006.1| putative membrane protein [Hyphomonas neptunium ATCC 15444]
          Length = 375

 Score =  302 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 110/372 (29%), Positives = 189/372 (50%), Gaps = 9/372 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
             +   V R  G+W    I    + +   +    QS    +D+S +  +DT GA LI   
Sbjct: 13  DSDEGNVLRLGGDWTVATI----NQLDAQLRAVSQSVPICLDVSGLGRLDTSGAYLIDRT 68

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
             +       + V  H     SL+   H        P ++        +    GK  V F
Sbjct: 69  WRENGAAWPPRIVGDHASA-ASLLEQVHAHAEPVPPPAKAD--AGLLAMLERTGKGSVDF 125

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             ++ +    LG  +          +K +    S++  M   G++ +P++  +SF  G V
Sbjct: 126 YKETTASLAFLGETLVTIVRLLVQPWKLR--WTSIVAVMEEAGLNAMPIIAFLSFFVGMV 183

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A  GA  L  F  EI++I+L+    LRE GV+LT +++AGR+ S+  A+IG+MK+ +E+
Sbjct: 184 VAFIGATTLKDFDLEIYTIELIGFSMLREFGVVLTGIVLAGRTNSSFTAQIGTMKMRQEV 243

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA++T+GL  + +L++PR+ A+++  P+LT +A  + + G + V W   DI  AVF  R 
Sbjct: 244 DAMQTLGLKPMDVLVAPRVLAMLVMTPILTFVATLAGVAGGATVAWAALDINPAVFVERM 303

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            ++  +   + G+ K+P     + ++A ++G  VG    SLGK  TT VVQ+I  +I+ID
Sbjct: 304 RNSVPIDQFWIGMSKSPVFGLVVALIACRQGLQVGGSVQSLGKATTTSVVQAIFAIIVID 363

Query: 362 SLFAIFYFAIGI 373
           ++FAIFY  +G+
Sbjct: 364 AIFAIFYMELGL 375


>gi|86748751|ref|YP_485247.1| hypothetical protein RPB_1627 [Rhodopseudomonas palustris HaA2]
 gi|86571779|gb|ABD06336.1| Protein of unknown function DUF140 [Rhodopseudomonas palustris
           HaA2]
          Length = 383

 Score =  302 bits (774), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 130/376 (34%), Positives = 200/376 (53%), Gaps = 11/376 (2%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           ++         AG+W +     +   V  A   +    +  +D+S +  +DT GA LI  
Sbjct: 16  IARGDGLALCAAGSWTAKFAPVLERIVADAEQLTGTRPNIFIDVSEVVRLDTFGAWLIER 75

Query: 61  FMEKYHG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
                     + K+ G+S +   L   +            P  +      +     +G+ 
Sbjct: 76  LRRNLAQDGIEAKIAGLSANYASLVDEVRQV------EPVPADTSRGGGLRAPIEKLGRT 129

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +  F +D  +   +LG V++           F+  L S +  +  V    VP+V+LI+F+
Sbjct: 130 MFAFGDDIVALISMLGAVLAGVLRAILHPSTFR--LASTVHHLEQVCWRAVPIVVLITFL 187

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G +IAQQG F   +FGA++F +D++ +L LREIGVLL A+M+AGRSGSA  AE+GSMK+
Sbjct: 188 IGCIIAQQGIFHFRRFGADVFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMKM 247

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EEIDA+RTMG D + +LI PR+ AL++++P+LT L   +A+ G  +V W Y  +    F
Sbjct: 248 REEIDALRTMGFDPIDVLIVPRLLALLLAMPILTFLGAMAALYGGGLVAWLYGGVDPEAF 307

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
             R     ++ +   G+IKAP MA  IGIVA  EG AV   + SLG+  T  VV+ I  V
Sbjct: 308 LLRLRDAISINHFTVGMIKAPVMALVIGIVACVEGLAVRGSAESLGQHTTASVVKGIFFV 367

Query: 358 IIIDSLFAIFYFAIGI 373
           I++D +FAIF+ +IGI
Sbjct: 368 IVMDGVFAIFFASIGI 383


>gi|115523490|ref|YP_780401.1| hypothetical protein RPE_1471 [Rhodopseudomonas palustris BisA53]
 gi|115517437|gb|ABJ05421.1| protein of unknown function DUF140 [Rhodopseudomonas palustris
           BisA53]
          Length = 377

 Score =  302 bits (774), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 127/376 (33%), Positives = 199/376 (52%), Gaps = 11/376 (2%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           +++        AG W +P    +   VV A   S      ++D+S ++ +DT GA LI  
Sbjct: 10  IAKGNALALCAAGPWTAPYAPALERIVVEAEALSSDGAKVLIDVSDVSRLDTFGAWLIER 69

Query: 61  FMEKYHG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
                     + ++ G+S +   L   +              R       +     IG+ 
Sbjct: 70  LRRSLAQGGIEAQIAGLSANYSSLVDEVRRVEADDAPRSTKMR------LRAPLEEIGRN 123

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +V F +   S   + G V ++          F+  L S +  +  V    VP+V+LI+F+
Sbjct: 124 VVGFGDTMVSLVAMSGAVTASVFRLIRHPLSFR--LTSTVHHLEQVCWRAVPIVVLITFL 181

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G ++AQQG F   +FGA++F +D++ +L LRE+GVLL A+M+AGRSGSA  AE+GSMK+
Sbjct: 182 IGCIVAQQGIFHFRKFGADVFVVDMLGVLVLRELGVLLVAIMVAGRSGSAYTAELGSMKM 241

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EEIDA+RTMG D + +L+ PR+ AL++++P+LT L   +A+ G  +V W Y  +    F
Sbjct: 242 REEIDALRTMGFDPIDVLVMPRLIALVLAVPILTFLGVVAALYGGGLVAWVYGGVEPDAF 301

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
             R     ++ +   G+IKAP MA  IG+VA  EG AV   + SLG+  T  VV+ I  V
Sbjct: 302 LLRLREAISIDHFTVGMIKAPVMALVIGVVACVEGLAVQGSAESLGQHTTASVVKGIFFV 361

Query: 358 IIIDSLFAIFYFAIGI 373
           I++D +FAI +  IG+
Sbjct: 362 IVMDGVFAIMFATIGM 377


>gi|78049251|ref|YP_365426.1| ABC transporter permease [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78037681|emb|CAJ25426.1| ABC transporter permease [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 409

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 119/364 (32%), Positives = 192/364 (52%), Gaps = 13/364 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R  G+W        A+     + +++      +D   I ++D+ G   ++ F  +   K
Sbjct: 58  VRLVGSWVLATALPQAE-----LLQAVPDGVRRIDARGIQQLDSAGVLQLLRFAGRMGLK 112

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
                     +   +L+        +  KP+R +    F      +G+   +   D    
Sbjct: 113 EDAIDFRDEHQ---ALVCTIEELNDERPKPKRDY---GFVAALDRLGRATHRVGQDILEL 166

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG  +           +F+  L S +  M  VG+  VP+V+L+S++ GAVIA  G+ 
Sbjct: 167 NSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFLGST 224

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAIRT+G
Sbjct: 225 ILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIRTLG 284

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD + +L+ PR+ ALI +LPLLT +A  + + G   V     DIP  ++ +R H T  L 
Sbjct: 285 LDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHETIQLR 344

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ A+++
Sbjct: 345 HFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWF 404

Query: 369 FAIG 372
             +G
Sbjct: 405 MKMG 408


>gi|146341950|ref|YP_001206998.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146194756|emb|CAL78781.1| putative ABC transporter (permease protein) [Bradyrhizobium sp.
           ORS278]
          Length = 377

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 135/375 (36%), Positives = 206/375 (54%), Gaps = 11/375 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            E      R  G W +P    +   V  A   + +S +  +D+S ++++DT GA LI   
Sbjct: 11  GEGNALALRATGAWTAPFAPALERLVADAEKLAGKSGNVSIDVSQVSKLDTFGAWLIERL 70

Query: 62  MEKYHG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
              +     + ++ G+S +   L   +         +  P       +   +   IG+ +
Sbjct: 71  RRSFTTGTVEARIDGLSANYASLVDEVRRV------SLAPGDDATNVTITGMLGQIGRSV 124

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
              +    +   +LG VI  +G        F+  L S I  +  V    VP+++LI+F+ 
Sbjct: 125 AGIVGTVAALIDMLGAVIVASGRVLVHPRSFR--LTSTIHHLEQVCWRAVPIIVLITFLI 182

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G +IAQQG F   +FGA+IF +D++ +L LREIGVLL A+MIAGRSGSA  AE+GSMK+ 
Sbjct: 183 GCIIAQQGIFHFRRFGADIFVVDMLGVLVLREIGVLLVAIMIAGRSGSAYTAELGSMKMR 242

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+RTMG D + +LI PR+ AL+I+LP+L+ L + +A+ G  +V W Y  +    F 
Sbjct: 243 EEIDALRTMGFDPIEVLILPRMLALVIALPILSFLGDIAALYGGGLVAWFYGGVDPEAFL 302

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
            R     ++ +   GL+KAP MA  IGIVA  EG AV   + SLG+  T+ VV+ I  VI
Sbjct: 303 LRLRDAISIDHFTVGLLKAPVMAAVIGIVACVEGLAVEGSAESLGRHTTSSVVKGIFFVI 362

Query: 359 IIDSLFAIFYFAIGI 373
           ++D +FAIF+ A+G+
Sbjct: 363 VMDGVFAIFFAAVGM 377


>gi|319783795|ref|YP_004143271.1| hypothetical protein Mesci_4108 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317169683|gb|ADV13221.1| protein of unknown function DUF140 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 395

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 152/373 (40%), Positives = 226/373 (60%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            E+G+    F+G W +  ++ + D  +  I K     +  +D+S I ++DT GA LI   
Sbjct: 27  EEDGVLGCAFSGIWTTRTVA-LVDADMRKIEKRSGFKTLALDVSKIEKMDTAGAWLIDRL 85

Query: 62  M---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
           +   EK   +I++QG S     L   +    R++ ++   +     N        +G+++
Sbjct: 86  VSAFEKKGVEIQMQGQSEIASILLEAVGEAVRREPESGPVRPP---NIVIRALEAVGRRV 142

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
            +  +D  +  +ILG  I          +       ++  Q+  +GV  +PVV+L+S + 
Sbjct: 143 YEMRDDFLASMNILGATIRGAQMKLGRGHAVNP--AAIFNQIDRMGVGAIPVVVLMSAIV 200

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA++AQQGA+QLS FGA+IF +DL+ +L LRE+GVL+TA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 201 GAIVAQQGAYQLSYFGADIFVVDLVGVLILRELGVLMTAIMIAGRSGSAITAEIGSMKMR 260

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE+DA++ +GL+ + +L+ PR+ AL+I+LP LTI+ANF+A+ G  +  W Y DIP A F 
Sbjct: 261 EEVDALKVIGLNPIGVLVFPRLVALVIALPCLTIIANFAALGGGILAAWLYSDIPPAAFI 320

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
            R      L+ IF GLIKAPFMA  IG +A  EG  VG  + SLG+ VT  VV+SI +VI
Sbjct: 321 DRLRVAIDLSTIFAGLIKAPFMAMIIGTIASVEGMKVGGSAESLGQHVTASVVKSIFVVI 380

Query: 359 IIDSLFAIFYFAI 371
           I+D LFA+FY AI
Sbjct: 381 ILDGLFAMFYAAI 393


>gi|148256837|ref|YP_001241422.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146409010|gb|ABQ37516.1| putative ABC transporter (permease protein) [Bradyrhizobium sp.
           BTAi1]
          Length = 377

 Score =  301 bits (772), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 133/375 (35%), Positives = 201/375 (53%), Gaps = 11/375 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            E      R  G W +P    +   V  A   + +     +D+S ++ +DT GA LI   
Sbjct: 11  GEGSALSLRATGAWTAPFAPSLERLVADAEKLAGKKIDVSIDVSEVSRLDTFGAWLIERL 70

Query: 62  MEKYH---GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
              +     + ++ G+S +   L   +         +  P       +   +   IG+ +
Sbjct: 71  RRSFTTGTAEARIDGLSANYASLVDEVRRV------SAAPDGDATAVTITGMLGQIGRSV 124

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
                   +   +LG VI  +G        F+  L S I  +  V    VP+++LI+F+ 
Sbjct: 125 AGIFGTVAALIDMLGAVIVASGRVFIHPRSFR--LTSTIHHLEQVCWRAVPIIVLITFLI 182

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G +IAQQG F   +FGA+IF +D++ +L LREIGVLL A+MIAGRSGSA  AE+GSMK+ 
Sbjct: 183 GCIIAQQGIFHFRRFGADIFVVDMLGVLVLREIGVLLVAIMIAGRSGSAYTAELGSMKMR 242

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+RTMG D + +LI PR+ AL+I+LP+L+ L + +A+ G  +V W Y  +    F 
Sbjct: 243 EEIDALRTMGFDPIEVLILPRMLALVIALPILSFLGDIAALYGGGLVAWFYGGVDPEAFL 302

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
            R     ++ +   GL+KAP MA  IGIVA  EG AV   + SLG+  T+ VV+ I  VI
Sbjct: 303 LRLREAISIDHFTVGLLKAPVMAAVIGIVACVEGLAVQGSAESLGRHTTSSVVKGIFFVI 362

Query: 359 IIDSLFAIFYFAIGI 373
           ++D +FAIF+  +G+
Sbjct: 363 VMDGVFAIFFATVGM 377


>gi|149187032|ref|ZP_01865339.1| ABC-type transport system permease component [Erythrobacter sp.
           SD-21]
 gi|148829321|gb|EDL47765.1| ABC-type transport system permease component [Erythrobacter sp.
           SD-21]
          Length = 369

 Score =  301 bits (772), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 118/369 (31%), Positives = 206/369 (55%), Gaps = 14/369 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            G +V   +G +    +  + +D+     + +    A +DLS ++EIDT+GA L      
Sbjct: 13  EGGSVLALSGPYLVSTVGAVDEDL-----RGLDEPLARIDLSEVSEIDTVGAWLACQLAS 67

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           ++    ++ G S    +L   ++      + +++   +     +  +   +G+K+    +
Sbjct: 68  RHGA--EITGASERATRLLGALTG-----MDSEQALSAPRLPVWSRVPEAMGEKMFNARS 120

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
            +      LG  + + G    +  +F+   ++L+ Q+  VGVS +P++ L+SF+ G VIA
Sbjct: 121 GAIGVISFLGAALISAGNLIRNPRRFRT--VALVHQVELVGVSALPIIGLMSFLIGIVIA 178

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           QQGA QL+ FGAE  +++L+  + LRE+GVL+TA+M+AGRSGSA  A++G+MK+ EE+DA
Sbjct: 179 QQGAVQLAAFGAETLTVNLVGRITLRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEVDA 238

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +RT+G+  +  L+ PRI + ++ +PLL   A+  AIIG ++V      IPF  F SR   
Sbjct: 239 MRTIGISPMEALVIPRILSAVLMMPLLGFYASCMAIIGGAVVGDLMLGIPFWTFLSRIQE 298

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +++ GLIKAP     +G+     G  V  +S  +GK+ T  VV +I  VI++D+ 
Sbjct: 299 VVPTYDVWVGLIKAPVFGLIVGLAGCYNGMQVEGNSEEVGKRTTLSVVAAIFAVIVLDAF 358

Query: 364 FAIFYFAIG 372
           FA+F+  +G
Sbjct: 359 FAVFFTELG 367


>gi|13470959|ref|NP_102528.1| permease of ABC transporter [Mesorhizobium loti MAFF303099]
 gi|14021702|dbj|BAB48314.1| permease of ABC transporter [Mesorhizobium loti MAFF303099]
          Length = 395

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 154/373 (41%), Positives = 224/373 (60%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            E G+    F+G W +  ++ + D  +  I K     +  +DLS I +IDT GA LI   
Sbjct: 27  EEAGVLGCAFSGIWTTRTVA-LIDADMRKIEKRSGFKTLALDLSKIEKIDTAGAWLIDRL 85

Query: 62  M---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
           +   EK + +++LQG S     L   +    R+     +   +   N        +G+++
Sbjct: 86  VSAFEKKNVEVRLQGQSEIASILLDAVGEAVRR---EPESGPARPPNIIIRALEAVGRRV 142

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
            +  +D  +  +ILG  I          +       ++  Q+  +GV  +PVV+L+S + 
Sbjct: 143 YEMRDDFLASMNILGATIRGAQMKLGRGHAVNP--AAIFNQIDRMGVGAIPVVVLMSAIV 200

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA++AQQGA+QLS FGA+IF +DL+ +L LRE+GVL+TA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 201 GAIVAQQGAYQLSYFGADIFVVDLVGVLILRELGVLMTAIMIAGRSGSAITAEIGSMKMR 260

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE+DA++ +GL+ + +L+ PR+ AL+I+LP LTI+ANF+A+ G  +  W Y DIP A F 
Sbjct: 261 EEVDALKVIGLNPIGVLVFPRLVALVIALPCLTIIANFAALGGGIVAAWLYSDIPPAAFI 320

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
            R      L+ IF GLIKAPFMA  IG +A  EG  VG  + SLG+ VT  VV+SI +VI
Sbjct: 321 DRLRVAIDLSTIFAGLIKAPFMAMIIGTIASVEGMKVGGSAESLGQHVTASVVKSIFVVI 380

Query: 359 IIDSLFAIFYFAI 371
           I+D LFA+FY AI
Sbjct: 381 ILDGLFAMFYAAI 393


>gi|91976115|ref|YP_568774.1| hypothetical protein RPD_1636 [Rhodopseudomonas palustris BisB5]
 gi|91682571|gb|ABE38873.1| protein of unknown function DUF140 [Rhodopseudomonas palustris
           BisB5]
          Length = 383

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 129/376 (34%), Positives = 198/376 (52%), Gaps = 11/376 (2%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           ++         AG+W +     +   V  A   +    +  +D+S +  +DT GA LI  
Sbjct: 16  IARGEGLALCAAGSWTARFAPSLERIVADAEKLTGTRPNIFIDVSEVARLDTFGAWLIER 75

Query: 61  FMEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
                     + ++ G+S +   L   +                    + +     +G+ 
Sbjct: 76  LRRNLTQDGVEARIAGLSANYASLVDEVRQVQ------PDVPAVASGGALRAPIEKLGRT 129

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +  F +D  +   +LG V++           F+  L S +  +  V    VP+V+LI+F+
Sbjct: 130 MYVFADDIVALISMLGAVLAGVMRAILHPTTFR--LTSTVHHLEQVCWRAVPIVVLITFL 187

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G +IAQQG F   +FGA++F +D++ +L LREIGVLL A+M+AGRSGSA  AE+GSMK+
Sbjct: 188 IGCIIAQQGIFHFRRFGADVFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMKM 247

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EEIDA+RTMG D + +LI PR+ AL++++P+LT L   SA+ G  +V W Y  +    F
Sbjct: 248 REEIDALRTMGFDPIDVLIVPRLIALLLAMPILTFLGAMSALYGGGLVAWLYGGVDPEAF 307

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
             R     ++ +   G+IKAP MA  IGIVA  EG AV   + SLG   T  VV+ I  V
Sbjct: 308 LLRLRDAISINHFTVGMIKAPVMALVIGIVACVEGLAVKGSAESLGSHTTASVVKGIFFV 367

Query: 358 IIIDSLFAIFYFAIGI 373
           I++D +FAIF+ +IGI
Sbjct: 368 IVMDGVFAIFFASIGI 383


>gi|39937298|ref|NP_949574.1| hypothetical protein RPA4238 [Rhodopseudomonas palustris CGA009]
 gi|39651156|emb|CAE29679.1| putative permease of ABC transporter [Rhodopseudomonas palustris
           CGA009]
          Length = 378

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 136/375 (36%), Positives = 205/375 (54%), Gaps = 10/375 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           ++      +  G W +     +         +   + S  +D++ I EIDTIGA ++   
Sbjct: 11  ADGDTLELKPKGAWTATNSKFMEQLSQDVAPQIAAAKSLTIDMAEIGEIDTIGAWVLEKL 70

Query: 62  ME---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
                +     + +G+ST   +L   +   +R+      P      N        IG+  
Sbjct: 71  SRSAAQAGRTAQFKGISTSYAELIDEVRQLNRRG-----PTPHPKPNPIIAKLDEIGRSA 125

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
                D      +LG + +            +  L SL  Q+Y VG   +P+++LI+F+ 
Sbjct: 126 WSATTDMAVFLEMLGALGAALLGVLRRPRSLR--LTSLTYQVYRVGWQAIPIMVLITFLI 183

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQG F   +FGAE + +D++ IL LREIGVL+ A+M+AGRSGSA  AE+GSMK+ 
Sbjct: 184 GAIIAQQGIFHFRKFGAESYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMR 243

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+ TMGLD V +LI PRI AL+I+LP+L  + + +A+ G  +  W Y  +  +VF 
Sbjct: 244 EEIDALSTMGLDPVEVLILPRIIALVIALPILAFVGSMAALYGGLLTAWFYGGMQPSVFI 303

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +R H   +L +   G+ KAPFMA  IGIVA  EG  V   + SLG + TT VV+SI +VI
Sbjct: 304 ARLHEAVSLNSFEVGMWKAPFMALVIGIVACSEGLRVKGSAESLGLQTTTSVVKSIFLVI 363

Query: 359 IIDSLFAIFYFAIGI 373
           ++D LFA+F+ +IG+
Sbjct: 364 VLDGLFAVFFASIGM 378


>gi|77456265|ref|YP_345770.1| hypothetical protein Pfl01_0037 [Pseudomonas fluorescens Pf0-1]
 gi|77380268|gb|ABA71781.1| putative ABC transport system, permease [Pseudomonas fluorescens
           Pf0-1]
          Length = 382

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 118/366 (32%), Positives = 197/366 (53%), Gaps = 7/366 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM--EKYH 66
            R  G+W     +E+   +   +N    +++  +DL+ +  +DT GA L++  +  E+  
Sbjct: 21  LRVTGDWTLAHYAEL-KQLSETLNGQYDANTP-IDLNGLGALDTAGASLLVELLGSERLG 78

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
              +    +       +L+   +R       P +    +    L   IG+ +     D+ 
Sbjct: 79  KSAEHPDCTISSAD-RALLQTVYRSLTDFCVPIKEPEISVSVQLLTRIGRAVDTVWQDTL 137

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
                +GL++           +++  +  +I  +   G+   P+V L++F+ GAV+A  G
Sbjct: 138 QLLGFVGLILETIARSLFRPKRWR--ITPMIAHIEQTGLDAAPIVALLTFLVGAVVAFLG 195

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A  L+ FGA +F++DL+    LRE GVLLTA+++AGR+ SA  A+IGSMK NEEIDAIRT
Sbjct: 196 ATVLASFGASVFTVDLVGFAFLREFGVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRT 255

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +GLD + +L+ PR+ AL+++LP+LT LA    I+G ++V     DI  A+F S   S   
Sbjct: 256 LGLDPMELLVVPRVLALLVALPMLTFLAMICGIVGGAVVCAVSLDISPAMFLSLLQSDIG 315

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           + +   GL+KAP  A  I  +   EGF V   + S+G   T+ VVQSI +VI++D++ A+
Sbjct: 316 IQHFLVGLVKAPIFAFLIAAIGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVLDAVAAL 375

Query: 367 FYFAIG 372
           F+  +G
Sbjct: 376 FFMEMG 381


>gi|192293078|ref|YP_001993683.1| hypothetical protein Rpal_4717 [Rhodopseudomonas palustris TIE-1]
 gi|192286827|gb|ACF03208.1| protein of unknown function DUF140 [Rhodopseudomonas palustris
           TIE-1]
          Length = 382

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 136/375 (36%), Positives = 205/375 (54%), Gaps = 10/375 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           ++      +  G W +     +         +   + S  +D++ I EIDTIGA ++   
Sbjct: 15  ADGDTLELKPKGAWTATNSKFMEQLSQDVAPQIAAAKSLTIDMAEIGEIDTIGAWVLEKL 74

Query: 62  ME---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
                +     + +G+ST   +L   +   +R+      P      N        IG+  
Sbjct: 75  SRSAAQAGRTAQFKGISTSYAELIDEVRQLNRRG-----PTPHPKPNPIIAKLDEIGRSA 129

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
                D      +LG + +            +  L SL  Q+Y VG   +P+++LI+F+ 
Sbjct: 130 WSATTDMAVFLEMLGALGAALLGVLRRPRSLR--LTSLTYQVYRVGWQAIPIMVLITFLI 187

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQG F   +FGAE + +D++ IL LREIGVL+ A+M+AGRSGSA  AE+GSMK+ 
Sbjct: 188 GAIIAQQGIFHFRKFGAESYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMR 247

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+ TMGLD V +LI PRI AL+I+LP+L  + + +A+ G  +  W Y  +  +VF 
Sbjct: 248 EEIDALSTMGLDPVEVLILPRIIALVIALPILAFVGSMAALYGGLLTAWFYGGMQPSVFI 307

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +R H   +L +   G+ KAPFMA  IGIVA  EG  V   + SLG + TT VV+SI +VI
Sbjct: 308 ARLHEAVSLNSFEVGMWKAPFMALVIGIVACSEGLRVKGSAESLGLQTTTSVVKSIFLVI 367

Query: 359 IIDSLFAIFYFAIGI 373
           ++D LFA+F+ +IG+
Sbjct: 368 VLDGLFAVFFASIGM 382


>gi|171322064|ref|ZP_02910936.1| protein of unknown function DUF140 [Burkholderia ambifaria MEX-5]
 gi|171092626|gb|EDT37930.1| protein of unknown function DUF140 [Burkholderia ambifaria MEX-5]
          Length = 427

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 100/366 (27%), Positives = 172/366 (46%), Gaps = 11/366 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             R  G W +  ++     V   +        +  DLS I  +D +G + +     +  G
Sbjct: 72  TVRLYGQWTALALARNRGAVARRVAGIATGRVSEWDLSGIERLDHVGGQALW----RVWG 127

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
           +    GV+    Q  ++     R   + + P+R   +          G  +  F      
Sbjct: 128 RKLPDGVALSPTQ-RTIFERIERLDSQREAPERVVHFGPITRF----GFMLFAFAEHLQG 182

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              + GLVI +                     +Y  G   +P+  L++F+ G V++   A
Sbjct: 183 GIAMFGLVILDALSVLRRPNTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 240

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M
Sbjct: 241 QQLQTFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 300

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     LI PR+ AL +++PLL +  N  A+ G ++       I    F         +
Sbjct: 301 GIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDINYFVRSLPGVVPI 360

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN++ G+ K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI 
Sbjct: 361 ANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIL 420

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 421 FQNVGL 426


>gi|312958198|ref|ZP_07772721.1| ABC transport system permease protein [Pseudomonas fluorescens WH6]
 gi|311287629|gb|EFQ66187.1| ABC transport system permease protein [Pseudomonas fluorescens WH6]
          Length = 382

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 118/365 (32%), Positives = 197/365 (53%), Gaps = 5/365 (1%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           + R  G+W     + +   +   ++    +  A +DL+ +  +DT GA L++  +     
Sbjct: 20  LLRITGDWTLAHYANL-KKLADKLDGQYDAG-ARIDLNGLGALDTAGASLLVELLGPTRI 77

Query: 68  KIKLQGVSTHI-EQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
           +   +     +     +L+   +R       P+++    +   L   IG+ +     DS 
Sbjct: 78  EQSAEQTDCTLSAADRALLKTVYRSLNDFCVPEKAPEETAGMQLLARIGRAVDTVWQDSK 137

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
                +GL++           +++  +  ++  +  VG+   P+V L++F+ GAV+A  G
Sbjct: 138 QLLGFIGLILETFARGIFRPKRWR--ITPMVAHLEQVGLDAAPIVALLTFLVGAVVAFLG 195

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A  L  FGA IF++DL++   LRE GVLLTA++IAGR+ SA  A+IGSMK NEEIDAIRT
Sbjct: 196 ATVLKSFGATIFTVDLVAFSFLREFGVLLTAILIAGRTASAFTAQIGSMKANEEIDAIRT 255

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +GLD + +L+ PR+ AL+++LP+LT LA  S I+G  +V     DI  A+F S   S   
Sbjct: 256 LGLDPMELLVLPRVLALLVALPMLTFLAMLSGIVGGGVVCAVALDISPAMFLSLLQSDIG 315

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           + +   G++KAP  A  I  +   EGF V   + S+G   T+ VVQSI +VI++D++ A+
Sbjct: 316 VQHFLVGMVKAPIFAFLIAAIGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVLDAVAAL 375

Query: 367 FYFAI 371
           F+  +
Sbjct: 376 FFMEM 380


>gi|316935758|ref|YP_004110740.1| hypothetical protein Rpdx1_4456 [Rhodopseudomonas palustris DX-1]
 gi|315603472|gb|ADU46007.1| protein of unknown function DUF140 [Rhodopseudomonas palustris
           DX-1]
          Length = 382

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 135/374 (36%), Positives = 203/374 (54%), Gaps = 10/374 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +         G W +     +      A  +   + S  +D++AI EIDTIGA ++    
Sbjct: 16  DGDTLELEPTGAWTATNSKIMEQLSAGAAQQIASAKSLTIDMAAIGEIDTIGAWVLEKLS 75

Query: 63  E---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
               +     + +G++    +L   +   +R+      P      N        IG+   
Sbjct: 76  RSAAEAGSPAQFKGIADSYAELIDEVRQLNRRG-----PTPHPKPNPIIAKLDEIGRSAW 130

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
               D      +LG +              +  L SL  Q+Y VG   +P+++LI+F+ G
Sbjct: 131 SATADIAVFLQMLGALGVAVLGVLRRPRSLR--LTSLTYQVYRVGWQAIPIMVLITFLIG 188

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           A+IAQQG F   +FGA+ + +D++ IL LREIGVL+ A+M+AGRSGSA  AE+GSMK+ E
Sbjct: 189 AIIAQQGIFHFRKFGADSYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMRE 248

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDA+ TMGLD V +LI PRI AL+I+LP+L  + + +A+ G  +  W Y  +  +VF +
Sbjct: 249 EIDALSTMGLDPVEVLILPRIIALVIALPILAFIGSMAALYGGLLTAWFYGGMQPSVFIA 308

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           R H   +L +   G+ KAPFMA  IGIVA  EG  V   + SLG + TT VV+SI +VI+
Sbjct: 309 RLHEAVSLNSFQVGMWKAPFMALVIGIVACSEGLRVKGSAESLGLQTTTSVVKSIFLVIV 368

Query: 360 IDSLFAIFYFAIGI 373
           +D LFA+F+ +IG+
Sbjct: 369 LDGLFAVFFASIGM 382


>gi|182680563|ref|YP_001834709.1| hypothetical protein Bind_3668 [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182636446|gb|ACB97220.1| protein of unknown function DUF140 [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 377

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 144/365 (39%), Positives = 216/365 (59%), Gaps = 7/365 (1%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
            F  AG+W       +       +    ++  A+ +L+ +  +DT GA LI    ++   
Sbjct: 17  HFSLAGHWTLEWSKGLESAAADLLKALGKARKAVFNLAGVERLDTAGAWLI----DRTRR 72

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF-KNLHYHIGKKIVKFINDSC 126
            +  +GVST ++ +        ++      P+      SF        GK +V+   ++ 
Sbjct: 73  NLSERGVSTELDHVRPEYGILFQEAHFRTFPEPKRQNASFFVAPLVETGKTVVEAGRETL 132

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
                LG  I++  +       F+G  +SL+ Q+  +G+  VP++ LI+F+ G ++AQQG
Sbjct: 133 RGMSFLGEAIASLAQSFVQRQHFRG--ISLVYQIETIGLRSVPIITLINFLVGCIVAQQG 190

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
            FQL +FGA  F++DL+ IL LRE+GVLLT++MIAGRSGSAI AEIGSMK+ EEIDA+  
Sbjct: 191 LFQLRRFGASTFAVDLLGILTLRELGVLLTSIMIAGRSGSAITAEIGSMKMREEIDALTV 250

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MGL  + +LI PR+ AL+ISLPLLT +A+ +A+ G  +V + Y  I    F +R H   +
Sbjct: 251 MGLRPIEVLIVPRLLALVISLPLLTFIADMAALAGGLLVSYSYGGIQPVAFLNRLHDAIS 310

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L   +TGLIKAPFMA  IG++A  EGFAV   + SLG++VTT VV+SI +VI++D LFA+
Sbjct: 311 LHTFYTGLIKAPFMALVIGLIAAVEGFAVEGSAESLGRQVTTSVVKSIFMVIVLDGLFAM 370

Query: 367 FYFAI 371
           F+  I
Sbjct: 371 FFAGI 375


>gi|154252954|ref|YP_001413778.1| hypothetical protein Plav_2512 [Parvibaculum lavamentivorans DS-1]
 gi|154156904|gb|ABS64121.1| protein of unknown function DUF140 [Parvibaculum lavamentivorans
           DS-1]
          Length = 387

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 129/375 (34%), Positives = 204/375 (54%), Gaps = 11/375 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           ++  +     AG+W    +  +   +  AI     +  AI+    IT  DT  A ++   
Sbjct: 21  ADGNVLRIEAAGDWSIVHLDPVDRQL-RAIGARPGTGRAIIGFKDITRFDTAAAAILGRT 79

Query: 62  ---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
              + +   K+  + VS     L   I           +P    +      +   IG  +
Sbjct: 80  AAHLGEQGIKVDFEDVSDAQRLLLDKIDS-----CGMPEPAHVPWRPLHIQIIDKIGATM 134

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
                +  +    +G V++  G   A   + +      +  M   G   +P+V L++F+ 
Sbjct: 135 RDIGAEGLAMLGFVGAVMATAGRTIARPSRLR--WTPFVHHMEKAGFDALPLVCLLTFLI 192

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GAV+AQQGA QL QFGAE+F+++L++I+ LRE+G+LLTA+++AGRSGSA  AEIGSMK+ 
Sbjct: 193 GAVVAQQGAVQLRQFGAEVFTVNLIAIIFLREVGLLLTAIIVAGRSGSAFTAEIGSMKMR 252

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+RT+GLD + +L+ PR+ AL+++LPLLT +A+   +IG  +V+    D+P  V+ 
Sbjct: 253 EEIDAMRTLGLDPMEMLVLPRVLALMVTLPLLTFVADIMGLIGGGLVVQVMLDMPPGVYI 312

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR            GL+KAPFMA  I +V  + G +V   + S+G   T  VV+SI +VI
Sbjct: 313 SRVQEAVGFWTFGVGLVKAPFMAVVIALVGCRSGLSVTGSAESVGAMTTRSVVRSIFLVI 372

Query: 359 IIDSLFAIFYFAIGI 373
           I+D+LFA+F+ A+GI
Sbjct: 373 ILDALFAMFFTAVGI 387


>gi|294010007|ref|YP_003543467.1| ABC-type transport system permease component LinK [Sphingobium
           japonicum UT26S]
 gi|292673337|dbj|BAI94855.1| ABC-type transport system permease component LinK [Sphingobium
           japonicum UT26S]
          Length = 376

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 114/370 (30%), Positives = 195/370 (52%), Gaps = 14/370 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
             G TV R +GN     + ++ D +      +I+     +DLS +  +DTIGA ++   +
Sbjct: 19  REGRTVIRLSGNLSIACLHDLPDRL-----DAIEGPVDTIDLSDVGHMDTIGAWVLHRAI 73

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++      + G     E+L + +              R      ++ +   IG+ +V   
Sbjct: 74  KRL--DCGITGDKCDAERLIATVGSVDEPVNI-----RPDHEPPWQRVVGQIGEAVVNSG 126

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                     G  +  T        +F+  + +++++   VGVS + ++ L+SF+ G VI
Sbjct: 127 TTLLGLLGFFGGTLVATWNVIRHPGRFR--INAVVQRFEVVGVSALGIIGLMSFLIGIVI 184

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQG+ QL QFG E+ +I+L+  L  RE+GVL+TA+M+AGRSGSA  A++G+MK+ EE+D
Sbjct: 185 AQQGSVQLRQFGMEMLTINLVGRLTFRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEVD 244

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+RT+G+  +  L+ PR  A+++ +PLL   ++  AIIG   +     DIP   F  R  
Sbjct: 245 AMRTIGVSPMEALVLPRTLAVVVMMPLLGFYSSIVAIIGGGFLCAVSLDIPPITFVQRLR 304

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               + +++ GLIKAP     I +    +G  V  ++  +G + T  VVQ+I +VI+ID+
Sbjct: 305 EVVPIHDLWVGLIKAPVFGVIIALAGCFQGMQVKANAEEVGLRTTAAVVQAIFLVIVIDA 364

Query: 363 LFAIFYFAIG 372
            FA+F+  +G
Sbjct: 365 FFAVFFTWVG 374


>gi|307945713|ref|ZP_07661049.1| ABC transporter permease protein [Roseibium sp. TrichSKD4]
 gi|307771586|gb|EFO30811.1| ABC transporter permease protein [Roseibium sp. TrichSKD4]
          Length = 382

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 134/369 (36%), Positives = 214/369 (57%), Gaps = 12/369 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY-- 65
           V   +G+W    ++E    V   +    +     +D SAI  +DT GA L+         
Sbjct: 23  VLCLSGDWTISSLAEAERLVESIMLDKYR--VTCLDTSAIDNLDTSGAWLVHRLRGSLEY 80

Query: 66  -HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
              +++L G++ +   LF  I   H  + K +K + S             GK++V    D
Sbjct: 81  QGRRVELIGLTENRFNLFCQIERHHPPEYKPEKSKVS-----LVGFLEATGKQVVNVGRD 135

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           + +  HILG +            + +G  +++  Q     +  VP+V L+SF+ GA+I+Q
Sbjct: 136 AIAMLHILGSLGVVLSTVLLQPKRLRGIAVAV--QFDRTCIGAVPIVALMSFLIGAIISQ 193

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG F L QFGA+I+ +DL  IL LREIGV+LTA+M+AGRSGSA  AE+G+M++ EE+DA+
Sbjct: 194 QGGFYLRQFGADIYVVDLAGILVLREIGVILTAIMVAGRSGSAFTAELGAMRMQEEVDAL 253

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             +GL    +L+ PRI AL+I+LP+LT +A+ +A++GA +  W Y DIP A + ++  + 
Sbjct: 254 HVIGLSVTEVLVLPRILALMIALPVLTFIADMAALVGAGLTTWVYLDIPPAAYLTQLQAA 313

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            T+  ++ G++KAPFMA  IG++A  EG  VG  + SLG+  T  VV++I +VI++D +F
Sbjct: 314 ITMKTLWVGIVKAPFMALIIGLIACVEGLKVGGSAESLGRHTTMSVVKAIFLVIVVDGVF 373

Query: 365 AIFYFAIGI 373
           AIF+ +I +
Sbjct: 374 AIFFASINV 382


>gi|254502466|ref|ZP_05114617.1| conserved domain protein [Labrenzia alexandrii DFL-11]
 gi|222438537|gb|EEE45216.1| conserved domain protein [Labrenzia alexandrii DFL-11]
          Length = 382

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 138/375 (36%), Positives = 211/375 (56%), Gaps = 12/375 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
              G      +G+W    +++    +        +     +D+S +  +DT GA LI   
Sbjct: 17  DSEGHQSLILSGDWTVSTLADADQQISKL--NVAKDKLTCIDVSEVDHLDTSGAWLIHRT 74

Query: 62  MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
             +      K++L GV+   E LF  I   H       +P RS F           G+++
Sbjct: 75  RGQLEFSGRKVQLTGVTPVRESLFHEIEKHHP---PRWQPDRSGFT--IVGFLEATGRQM 129

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           V+   D+ +  HILG +            + +   +++  Q     +  VP+V L+SF+ 
Sbjct: 130 VEVYKDTLAMLHILGSLGIVLSTVLLQPKRLRSIAIAV--QFDRSCIGAVPIVALMSFLI 187

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+I+QQG F L QFGA+IF +DL  IL LREIGV+LTA+M+AGRSGSA  AE+G+M++ 
Sbjct: 188 GAIISQQGGFYLRQFGADIFVVDLAGILVLREIGVILTAIMVAGRSGSAFTAELGAMRMQ 247

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE+DA+  +GL    +L+ PRI AL+I+LP+LT +A+ SA+ GA ++ W Y DIP A F 
Sbjct: 248 EEVDALHVIGLSVTEVLVLPRILALMIALPILTFVADISALFGAGLITWAYLDIPPAAFL 307

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           ++  S  T+     G+IKAPFMA  +G++A  EG  V   S SLG+  T  VV++I +VI
Sbjct: 308 TQLQSAITVNTFVVGIIKAPFMALIVGLIACVEGLKVEGSSESLGRHTTMAVVKAIFLVI 367

Query: 359 IIDSLFAIFYFAIGI 373
           ++D +FA+F+ AIG+
Sbjct: 368 VVDGMFAMFFAAIGV 382


>gi|166713439|ref|ZP_02244646.1| ABC transporter permease [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 370

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 120/364 (32%), Positives = 193/364 (53%), Gaps = 13/364 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R AG+W        A+     + +++      +D   I ++D+ G   ++ F  +   K
Sbjct: 19  LRLAGSWVLATALPQAE-----LLQTVPDGVRRIDARGIQQLDSAGVLQLLRFASRMGLK 73

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
                     +   +L+        +  KP+R +    F      +G+   +   D    
Sbjct: 74  EDAIDFRDEHQ---ALVCTIEELNDERPKPKRDY---GFVAALDRLGRATHRIGQDILEL 127

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG  +           +F+  L S +  M  VG+  VP+V+L+S++ GAVIA  G+ 
Sbjct: 128 NSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFLGST 185

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAIRT+G
Sbjct: 186 ILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIRTLG 245

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD + +L+ PR+ ALI +LPLLT +A  + + G   V     DIP  ++ +R H T  L 
Sbjct: 246 LDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHETIQLR 305

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ A+++
Sbjct: 306 HFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWF 365

Query: 369 FAIG 372
             +G
Sbjct: 366 MKMG 369


>gi|289662615|ref|ZP_06484196.1| ABC transporter permease [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289668440|ref|ZP_06489515.1| ABC transporter permease [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 370

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 120/364 (32%), Positives = 193/364 (53%), Gaps = 13/364 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R AG+W        A+     + +++      +D   I ++D+ G   ++ F  +   K
Sbjct: 19  LRLAGSWVLATALPQAE-----LLQTVPDGVRRIDARGIQQLDSAGVLQLLRFASRMGLK 73

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
                     +   +L+        +  KP+R +    F      +G+   +   D    
Sbjct: 74  EDAIDFRDEHQ---ALVCTIEELNDERPKPKRDY---GFVAALDRLGRATHRVGQDILEL 127

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG  +           +F+  L S +  M  VG+  VP+V+L+S++ GAVIA  G+ 
Sbjct: 128 NSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFLGST 185

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAIRT+G
Sbjct: 186 ILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIRTLG 245

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD + +L+ PR+ ALI +LPLLT +A  + + G   V     DIP  ++ +R H T  L 
Sbjct: 246 LDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDTIQLR 305

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ A+++
Sbjct: 306 HFLVGLSKAPLFALVIGLIGCLEGLKVTGTAQSVGERTTSSVVQTISLVIILDAIAALWF 365

Query: 369 FAIG 372
             +G
Sbjct: 366 MKMG 369


>gi|260463968|ref|ZP_05812164.1| protein of unknown function DUF140 [Mesorhizobium opportunistum
           WSM2075]
 gi|259030343|gb|EEW31623.1| protein of unknown function DUF140 [Mesorhizobium opportunistum
           WSM2075]
          Length = 395

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 154/373 (41%), Positives = 223/373 (59%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            E G+    F+G W +  ++ + D  +  I K     +  +DLS I +IDT GA LI   
Sbjct: 27  EEGGVLGCAFSGVWTTRTVA-LIDADMRKIEKRSGFKTLALDLSKIEKIDTAGAWLIDRL 85

Query: 62  M---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
           +   EK + +++LQG S     L   +    R+     +   +   N        +G+++
Sbjct: 86  VSVFEKKNVEVQLQGRSEIASILLDAVGEAVRR---EPESGPARPPNIVLRALEAVGRRV 142

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
            +  +D  +  +ILG  I          +       ++  Q+  +GV  +PVV+L+S + 
Sbjct: 143 YEMRDDFLASMNILGATIRGAQMKLGRGHAVNP--AAIFNQIDRMGVGAIPVVVLMSAIV 200

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA++AQQGA+QLS FGA+IF +DL+ +L LRE+GVL+TA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 201 GAIVAQQGAYQLSYFGADIFVVDLVGVLILRELGVLMTAIMIAGRSGSAITAEIGSMKMR 260

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE+DA++ +GL+ + +L+ PR+ AL+I+LP LTI+ANF+A+ G     W Y DIP A F 
Sbjct: 261 EEVDALKVIGLNPIGVLVFPRLVALVIALPCLTIIANFAALGGGIAAAWLYSDIPPAAFL 320

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
            R      L+ IF GLIKAPFMA  IG +A  EG  VG  + SLG+ VT  VV+SI +VI
Sbjct: 321 DRLRVAIDLSTIFAGLIKAPFMAMIIGTIASVEGMKVGGSAESLGQHVTASVVKSIFVVI 380

Query: 359 IIDSLFAIFYFAI 371
           I+D LFA+FY AI
Sbjct: 381 ILDGLFAMFYAAI 393


>gi|238784662|ref|ZP_04628667.1| ABC transporter, permease protein [Yersinia bercovieri ATCC 43970]
 gi|238714434|gb|EEQ06441.1| ABC transporter, permease protein [Yersinia bercovieri ATCC 43970]
          Length = 381

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 120/361 (33%), Positives = 197/361 (54%), Gaps = 6/361 (1%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72
           G+W       +  +V     ++    + + DLS +  +DT GA L++  + +   K +L+
Sbjct: 25  GDWVLAHYRALEPEVTQL--RANLPAAVVFDLSQLGALDTAGATLLVLLLGEERVK-QLR 81

Query: 73  GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF-KNLHYHIGKKIVKFINDSCSQAHI 131
            ++  +     ++  T    + +  P+ +     F   L  +IG+ +     D  S    
Sbjct: 82  KLAPTLPDERRVLLETVSHVLPDLTPEPATKAPPFWLELLSNIGRSMDNLWQDIKSLLGF 141

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +GL +           +++  + SLI  +  +G++ VP+++L++F+ GAVIA  GA  L+
Sbjct: 142 VGLTLEALLSTIFRPSRWR--MTSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLT 199

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            FGA IF++DL+    LRE  VLLTA+++AGR+ SA  AEIG MK NEEIDAI+T+GL+ 
Sbjct: 200 TFGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNP 259

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V +L+ PR+ AL+ISLP+LT +     I G  +V     DI   +F S   ++  L +  
Sbjct: 260 VELLVLPRVLALLISLPMLTFIGMICGIFGGMVVCALTLDISPTMFLSIMQNSNGLQHFL 319

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
            G+ KAP  A  I I+   EGF V   + S+G   TT VV SI +VI++D++ A+F+  +
Sbjct: 320 VGISKAPVFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEM 379

Query: 372 G 372
           G
Sbjct: 380 G 380


>gi|241661797|ref|YP_002980157.1| hypothetical protein Rpic12D_0175 [Ralstonia pickettii 12D]
 gi|240863824|gb|ACS61485.1| protein of unknown function DUF140 [Ralstonia pickettii 12D]
          Length = 374

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 101/371 (27%), Positives = 187/371 (50%), Gaps = 12/371 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +G +V   +G+W +  ++E A         ++   ++    L+ +  ID  GA+L+    
Sbjct: 15  DGRSVAFLSGDWTTLALAERAGVRSARQQIRAGLDNANAWCLTEVGRIDHFGAQLLW--- 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            +  G    + +    +Q   ++    +      K + +   N    L    G+ ++ F 
Sbjct: 72  -RAWGNQWPEHLDARPDQ-RRMLDRVAKLDPGGWKQRLAPRMNPVAIL----GEGMLDFF 125

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           + + +   ++G ++ + G F  + +  +G    +   +Y  G   + +  L+ F+ G V+
Sbjct: 126 DHASNGIAMVGQLVFDLGRFVRAPH--RGPWREISANIYSTGYKALGITALVGFLIGIVL 183

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           +   A QL  FGA IF ++++ +  +RE+G +L A+++AGRSGSAI A+IG M++ EE+D
Sbjct: 184 SYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELD 243

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R MG+     LI P++ AL I++PLL    +  A+ G  +      DI    F +   
Sbjct: 244 AMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITSLP 303

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               +AN++ G+ K       I +VA   G  +  ++ SLG+  TT VV SI+IVI+ D+
Sbjct: 304 DAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIVILADA 363

Query: 363 LFAIFYFAIGI 373
           +FAI +  +GI
Sbjct: 364 VFAILFKDVGI 374


>gi|17987248|ref|NP_539882.1| toluene tolerance protein Ttg2B [Brucella melitensis bv. 1 str.
           16M]
 gi|17982923|gb|AAL52146.1| toluene tolerance protein ttg2b [Brucella melitensis bv. 1 str.
           16M]
          Length = 390

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 159/373 (42%), Positives = 229/373 (61%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G+ V   +G W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI   
Sbjct: 22  EQDGMRVIHLSGPWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 80

Query: 62  MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++   K   ++L+GV      L   +     + +   + +  FF+ +F N+   +G  +
Sbjct: 81  RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 137

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ND     HILG  I   G            + +++ QM  +GV  +P+V+L+S + 
Sbjct: 138 ISMFNDFKMAMHILGATIR--GAQLKYGRGNGIPIAAIVTQMDRMGVGAIPIVVLMSTIV 195

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 196 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 255

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F 
Sbjct: 256 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 315

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 316 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 375

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 376 VVDGLFAMFYAAI 388


>gi|189024185|ref|YP_001934953.1| Sulfate transporter/antisigma-factor [Brucella abortus S19]
 gi|189019757|gb|ACD72479.1| Sulfate transporter/antisigma-factor [Brucella abortus S19]
          Length = 390

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 159/373 (42%), Positives = 230/373 (61%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI   
Sbjct: 22  EQDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 80

Query: 62  MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++   K   ++L+GV      L   +     + +   + +  FF+ +F N+   +G  +
Sbjct: 81  RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 137

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ND     HILG  I   G            + +++ QM  +GV  +P+V+L+S + 
Sbjct: 138 ISMFNDFKMAMHILGATIR--GAQLKYGRGNGIPIAAIVTQMDRMGVGAIPIVVLMSTIV 195

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 196 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 255

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F 
Sbjct: 256 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 315

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 316 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 375

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 376 VVDGLFAMFYAAI 388


>gi|91975833|ref|YP_568492.1| hypothetical protein RPD_1353 [Rhodopseudomonas palustris BisB5]
 gi|91682289|gb|ABE38591.1| protein of unknown function DUF140 [Rhodopseudomonas palustris
           BisB5]
          Length = 378

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 136/376 (36%), Positives = 202/376 (53%), Gaps = 10/376 (2%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM- 59
           +++  +      G W + + + +         +   + S  +D++ + EIDTIGA L+  
Sbjct: 10  VTDGDVLELHPGGAWIASQSAALERLFEGVAPQVAAAKSLKIDMTEVIEIDTIGAWLLEK 69

Query: 60  --YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
                 +        GV      L   +   +R      +P      N        +G+ 
Sbjct: 70  ASREAAQAGRTAHFVGVGERYAGLIEEVRQVNR-----HRPTPKPKVNPIIARLDQVGRS 124

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
                 D      + G +              +  L SL  Q+Y VG   +P+V+LI+F+
Sbjct: 125 AWSATQDIAVFLDMFGALGVALLGVLRRPRSLR--LTSLTYQIYRVGWRAIPIVVLITFL 182

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            GA+IAQQG F   +FGAE + +D++ IL LREIGVL+ A+M+AGRSGSA  AE+GSMK+
Sbjct: 183 IGAIIAQQGIFHFRKFGAESYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKM 242

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EEIDA+ TMGLD V +LI PRI AL+I+LP+LT + + SA+ G  +  W Y  +  AV+
Sbjct: 243 REEIDALSTMGLDPVEVLILPRIIALVIALPILTFIGSMSALYGGLLTAWFYGGMQPAVY 302

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            +R H   +L +   G+ KAPFMA  IGIVA  EG  V   + SLG + TT VV+SI +V
Sbjct: 303 IARLHEAVSLNSFEVGIWKAPFMALVIGIVACSEGLRVKGSAESLGLQTTTSVVKSIFLV 362

Query: 358 IIIDSLFAIFYFAIGI 373
           I++D LFA+F+ +IG+
Sbjct: 363 IVLDGLFAVFFASIGL 378


>gi|254247077|ref|ZP_04940398.1| hypothetical protein BCPG_01856 [Burkholderia cenocepacia PC184]
 gi|124871853|gb|EAY63569.1| hypothetical protein BCPG_01856 [Burkholderia cenocepacia PC184]
          Length = 425

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 102/366 (27%), Positives = 174/366 (47%), Gaps = 11/366 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             R  G W +  ++     V   I        +  DLS I  +D +G + +     +  G
Sbjct: 70  TVRLTGQWTALSLARNRGAVARRIASIAAGRVSEWDLSGIERLDHVGGQALW----RVWG 125

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
           +    GV+    Q  ++     R   + + P+R   ++    L    G  I  F      
Sbjct: 126 RKLPAGVALSATQ-RTIFERIERLDSEREAPERIVRFDPVTRL----GLAIFAFGEHLQG 180

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              + G VI +                 +   +Y  G   +P+  L++F+ G V++   A
Sbjct: 181 GIAMFGRVILDALSVLRRPKTMP--WKEISANIYSAGAQALPITALVAFLIGIVLSYLSA 238

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M
Sbjct: 239 QQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 298

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     LI PR+ AL +++PLL +  N  A+ G ++       I    F         +
Sbjct: 299 GIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKLVLGIDINYFVRSLPGVVPI 358

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN++ G+ K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI 
Sbjct: 359 ANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIL 418

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 419 FQNVGL 424


>gi|83858858|ref|ZP_00952380.1| ABC transporter, permease protein, putative [Oceanicaulis
           alexandrii HTCC2633]
 gi|83853681|gb|EAP91533.1| ABC transporter, permease protein, putative [Oceanicaulis
           alexandrii HTCC2633]
          Length = 384

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 114/372 (30%), Positives = 181/372 (48%), Gaps = 5/372 (1%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            +    +    G+W    +    D  +  I         ++DLS +  IDT GA ++   
Sbjct: 18  QDGARLIVEPKGDWLMEAVGR-FDRRLRRIESETDPKDLVIDLSGLGRIDTAGAYVLGRT 76

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
           + +       +      +    ++    ++      P+         +    IG+ +   
Sbjct: 77  LSRCREPDADRHFIGEHQTARRMMGEMLQRLADC--PEDEIQPRGVISTLARIGQGVEDG 134

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           + ++       G   +       +  K +    S I  M   GV  +P++ ++SF  GAV
Sbjct: 135 LKETVESFAFFGRTFTTGLSVLVNPTKMR--WTSTIHLMETAGVDALPIISVLSFFIGAV 192

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A  GA  L  FGA +F++DL+ I  LRE GV++TA+++AGRS SA  A IGSMK+ +EI
Sbjct: 193 VAFMGASLLETFGASVFTVDLVGIAVLREFGVIITAILLAGRSDSAFTAAIGSMKMQQEI 252

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA++ MGLD   +L+ PR+ A ++  PLLT+ A  + + G  +V W   DI    F +R 
Sbjct: 253 DAMKVMGLDPYEVLVLPRVIACVVMAPLLTLSAMVAGVFGGMLVSWMTLDISPNFFLTRL 312

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           + T  L +   G+ KAP     I IV  + G  VG    SLGK+VTT VVQ+I  VI+ID
Sbjct: 313 NDTIDLKHFLVGMSKAPVFGLVIAIVGCRHGLQVGGDVESLGKRVTTSVVQAIFAVIVID 372

Query: 362 SLFAIFYFAIGI 373
           +LFA+ Y  + I
Sbjct: 373 ALFAMMYLELDI 384


>gi|85707661|ref|ZP_01038727.1| ABC-type transport system permease component [Erythrobacter sp.
           NAP1]
 gi|85689195|gb|EAQ29198.1| ABC-type transport system permease component [Erythrobacter sp.
           NAP1]
          Length = 370

 Score =  299 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 115/371 (30%), Positives = 190/371 (51%), Gaps = 14/371 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            E G T+   +G      I ++  ++       +  +   VDLS + E+DT+GA ++  F
Sbjct: 12  EEGGGTMLALSGPLLVSTIGKLERELSR-----LGHEVGRVDLSDVEEMDTVGAWVVCRF 66

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
               H    + G +   ++L   +                     ++ +   +G+K+   
Sbjct: 67  A--THQSAAITGTTPSAKRLLEAVEAASSDVEITPD-----RTPVWERVPLALGEKVYAA 119

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
            +         G ++   G        F   L + +RQM  VGV+ +P++ L+SF+ G V
Sbjct: 120 RSGVYGVVGFFGQILIGFGSLLRHPSTFP--LKATVRQMEMVGVAALPIIGLMSFLIGIV 177

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IAQQGA QL+QFGAE  +++L+  + LRE+GVL+TA+M+AGRSGSA  A+IG+MK+ EE+
Sbjct: 178 IAQQGAVQLAQFGAETLTVNLVGRITLRELGVLMTAIMVAGRSGSAFAAQIGTMKLTEEV 237

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+RT+G+  +  L+ PRI A    + +L   A+   I+G ++V      IPF  F  R 
Sbjct: 238 DAMRTIGISPIERLVIPRILACTFMMVVLGFYASIVGIVGGAVVGHLSLGIPFFTFLERI 297

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                L +++ GL+KAP     + +     G  V  +S  +G + T  VV +I  VI++D
Sbjct: 298 QEVVPLHDVWVGLVKAPVFGLIVALAGCYHGMQVKGNSEQVGIRTTMAVVSAIFAVIVLD 357

Query: 362 SLFAIFYFAIG 372
           + FA+F+  IG
Sbjct: 358 AFFAVFFTEIG 368


>gi|86748498|ref|YP_484994.1| hypothetical protein RPB_1373 [Rhodopseudomonas palustris HaA2]
 gi|86571526|gb|ABD06083.1| Protein of unknown function DUF140 [Rhodopseudomonas palustris
           HaA2]
          Length = 378

 Score =  299 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 136/376 (36%), Positives = 206/376 (54%), Gaps = 10/376 (2%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           +++  +      G W +   + +        ++   + +  +D++ + EIDTIGA L+  
Sbjct: 10  VTQGDVLRLHPGGAWIAMHTAVLERLFDGVASQVAAAKALEIDMTDVVEIDTIGAWLLEK 69

Query: 61  FME---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
                 +     +  GV+     L   +   +R+      P+     N        IG+ 
Sbjct: 70  VSRDAAQAGRTAQFVGVADRYAGLIEEVRQVNRRG-----PKPRPSVNPIIARLDQIGRS 124

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
                 D      +LG +              +  L SL  Q+Y VG   +P+V+LI+F+
Sbjct: 125 AWSATQDISVFLAMLGALGVALLGVLRRPRSLR--LTSLTYQVYRVGWQAIPIVVLITFL 182

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            GA+IAQQG F   +FGAE + +D++ IL LREIGVL+ A+M+AGRSGSA  AE+GSMK+
Sbjct: 183 IGAIIAQQGIFHFRKFGAESYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKM 242

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EEIDA+ TMGLD V +LI PRI AL+I+LP+LT + + +A+ G  +  W Y  +  AV+
Sbjct: 243 REEIDALTTMGLDPVEVLILPRIIALVIALPILTFIGSMAALYGGLLTAWFYGGMQPAVY 302

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            +R H   +L +   G+ KAPFMA  IGIVA  EG  V   + SLG + TT VV+SI +V
Sbjct: 303 IARLHEAVSLNSFEVGIWKAPFMALVIGIVACSEGLRVKGSAESLGLQTTTSVVKSIFLV 362

Query: 358 IIIDSLFAIFYFAIGI 373
           I++D LFA+F+ +IG+
Sbjct: 363 IVLDGLFAVFFASIGM 378


>gi|23501899|ref|NP_698026.1| toulene ABC transporter permease [Brucella suis 1330]
 gi|62289942|ref|YP_221735.1| toulene ABC transporter permease [Brucella abortus bv. 1 str.
           9-941]
 gi|82699870|ref|YP_414444.1| sulfate transporter [Brucella melitensis biovar Abortus 2308]
 gi|237815443|ref|ZP_04594441.1| toulene ABC transporter, permease protein [Brucella abortus str.
           2308 A]
 gi|254697384|ref|ZP_05159212.1| Sulfate transporter/antisigma-factor [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254706786|ref|ZP_05168614.1| Sulfate transporter/antisigma-factor [Brucella pinnipedialis
           M163/99/10]
 gi|254730282|ref|ZP_05188860.1| Sulfate transporter/antisigma-factor [Brucella abortus bv. 4 str.
           292]
 gi|256031600|ref|ZP_05445214.1| Sulfate transporter/antisigma-factor [Brucella pinnipedialis
           M292/94/1]
 gi|256159738|ref|ZP_05457485.1| Sulfate transporter/antisigma-factor [Brucella ceti M490/95/1]
 gi|256255000|ref|ZP_05460536.1| Sulfate transporter/antisigma-factor [Brucella ceti B1/94]
 gi|256257499|ref|ZP_05463035.1| Sulfate transporter/antisigma-factor [Brucella abortus bv. 9 str.
           C68]
 gi|256369443|ref|YP_003106951.1| toluene ABC transporter, permease protein, putative [Brucella
           microti CCM 4915]
 gi|260545309|ref|ZP_05821050.1| sulfate transporter/antisigma-factor [Brucella abortus NCTC 8038]
 gi|260757978|ref|ZP_05870326.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260761801|ref|ZP_05874144.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260883775|ref|ZP_05895389.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|261222188|ref|ZP_05936469.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|261314254|ref|ZP_05953451.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|265988688|ref|ZP_06101245.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|265998152|ref|ZP_06110709.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|297248343|ref|ZP_06932061.1| ABC transport system permease [Brucella abortus bv. 5 str. B3196]
 gi|23347840|gb|AAN29941.1| toulene ABC transporter, permease protein, putative [Brucella suis
           1330]
 gi|62196074|gb|AAX74374.1| hypothetical toulene ABC transporter, permease protein [Brucella
           abortus bv. 1 str. 9-941]
 gi|82615971|emb|CAJ10994.1| Sulfate transporter/antisigma-factor antagonist STAS:Protein of
           unknown function DUF140 [Brucella melitensis biovar
           Abortus 2308]
 gi|237790280|gb|EEP64490.1| toulene ABC transporter, permease protein [Brucella abortus str.
           2308 A]
 gi|255999603|gb|ACU48002.1| toluene ABC transporter, permease protein, putative [Brucella
           microti CCM 4915]
 gi|260096716|gb|EEW80591.1| sulfate transporter/antisigma-factor [Brucella abortus NCTC 8038]
 gi|260668296|gb|EEX55236.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260672233|gb|EEX59054.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260873303|gb|EEX80372.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|260920772|gb|EEX87425.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|261303280|gb|EEY06777.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|262552620|gb|EEZ08610.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|264660885|gb|EEZ31146.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|297175512|gb|EFH34859.1| ABC transport system permease [Brucella abortus bv. 5 str. B3196]
          Length = 391

 Score =  299 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 159/373 (42%), Positives = 230/373 (61%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI   
Sbjct: 23  EQDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81

Query: 62  MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++   K   ++L+GV      L   +     + +   + +  FF+ +F N+   +G  +
Sbjct: 82  RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ND     HILG  I   G            + +++ QM  +GV  +P+V+L+S + 
Sbjct: 139 ISMFNDFKMAMHILGATIR--GAQLKYGRGNGIPIAAIVTQMDRMGVGAIPIVVLMSTIV 196

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F 
Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 377 VVDGLFAMFYAAI 389


>gi|225852524|ref|YP_002732757.1| hypothetical protein BMEA_A1060 [Brucella melitensis ATCC 23457]
 gi|256044678|ref|ZP_05447582.1| hypothetical protein Bmelb1R_09298 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256113572|ref|ZP_05454392.1| hypothetical protein Bmelb3E_12477 [Brucella melitensis bv. 3 str.
           Ether]
 gi|256263986|ref|ZP_05466518.1| sulfate transporter/antisigma-factor [Brucella melitensis bv. 2
           str. 63/9]
 gi|260564024|ref|ZP_05834510.1| sulfate transporter/antisigma-factor [Brucella melitensis bv. 1
           str. 16M]
 gi|265991102|ref|ZP_06103659.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265994939|ref|ZP_06107496.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|225640889|gb|ACO00803.1| protein of unknown function DUF140 [Brucella melitensis ATCC 23457]
 gi|260154040|gb|EEW89132.1| sulfate transporter/antisigma-factor [Brucella melitensis bv. 1
           str. 16M]
 gi|262766052|gb|EEZ11841.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|263001886|gb|EEZ14461.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263094130|gb|EEZ18052.1| sulfate transporter/antisigma-factor [Brucella melitensis bv. 2
           str. 63/9]
 gi|326409040|gb|ADZ66105.1| conserved hypothetical protein [Brucella melitensis M28]
 gi|326538749|gb|ADZ86964.1| conserved hypothetical protein [Brucella melitensis M5-90]
          Length = 391

 Score =  299 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 159/373 (42%), Positives = 229/373 (61%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G+ V   +G W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI   
Sbjct: 23  EQDGMRVIHLSGPWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81

Query: 62  MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++   K   ++L+GV      L   +     + +   + +  FF+ +F N+   +G  +
Sbjct: 82  RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ND     HILG  I   G            + +++ QM  +GV  +P+V+L+S + 
Sbjct: 139 ISMFNDFKMAMHILGATIR--GAQLKYGRGNGIPIAAIVTQMDRMGVGAIPIVVLMSTIV 196

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F 
Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 377 VVDGLFAMFYAAI 389


>gi|294852390|ref|ZP_06793063.1| ABC transport system permease [Brucella sp. NVSL 07-0026]
 gi|294820979|gb|EFG37978.1| ABC transport system permease [Brucella sp. NVSL 07-0026]
          Length = 391

 Score =  299 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 158/373 (42%), Positives = 230/373 (61%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI   
Sbjct: 23  EQDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81

Query: 62  MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++   K   ++L+GV      L   +     + +   + +  FF+ +F N+   +G  +
Sbjct: 82  RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ND     HILG  I   G            + +++ QM  +GV  +P+++L+S + 
Sbjct: 139 ISMFNDFKMAMHILGATIR--GAQLKYGRGNGIPIAAIVTQMDRMGVGAIPIIVLMSTIV 196

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F 
Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 377 VVDGLFAMFYAAI 389


>gi|218886600|ref|YP_002435921.1| hypothetical protein DvMF_1505 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218757554|gb|ACL08453.1| protein of unknown function DUF140 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 430

 Score =  299 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 124/374 (33%), Positives = 204/374 (54%), Gaps = 11/374 (2%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINK-----SIQSDSAIV--DLSAITEIDTIGAELIM 59
            V  F+G W    I  +   ++    +     S+Q D+ +V  DL+ +T +DT GA+L+ 
Sbjct: 61  LVLTFSGVWDVASIGRMTARLLRRCAEVGNACSVQGDAPVVHLDLAEVTRLDTAGAQLLC 120

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
                         V  H+      +     + I      R+   +        IG  IV
Sbjct: 121 RAA--ASMATAGARVVWHVSDHGQSMLLDRVRAIDISAVPRARRISPVVGALNAIGGSIV 178

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           + +  + +    LG+ + +     A  ++ +   +S++  M   G+  VP+V L++F+ G
Sbjct: 179 EELEQARAIIGFLGMFLVSLAAAVARPWRLR--WVSIVHHMEQTGIQAVPIVALLTFLIG 236

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V A  G+ Q ++FGA++F ++L+ +  LRE+GVLLTA+++AGRSGS+  A+IG+M  NE
Sbjct: 237 LVTAYMGSEQFTRFGAQVFVVNLIEVSTLRELGVLLTALIVAGRSGSSFTAQIGAMVANE 296

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DA+R+MGLD + +L+ PR+ AL++ LP+LT +A+F  ++G  I  W    I    F  
Sbjct: 297 EVDAMRSMGLDPMEVLVIPRVVALVLMLPVLTFIADFMGVLGGGIASWLSLGISPGAFAV 356

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           RF     LAN  TGL+KAPF A  IGIV   +GF V   + S+G+  T  VV+SI +VI+
Sbjct: 357 RFQEITRLANFVTGLVKAPFFALIIGIVGCFQGFRVTGSAESVGRLTTQAVVESIFLVIV 416

Query: 360 IDSLFAIFYFAIGI 373
            ++ FAI + ++G+
Sbjct: 417 ANAGFAILFMSLGV 430


>gi|187927276|ref|YP_001897763.1| hypothetical protein Rpic_0168 [Ralstonia pickettii 12J]
 gi|309780024|ref|ZP_07674777.1| competence protein ComM [Ralstonia sp. 5_7_47FAA]
 gi|187724166|gb|ACD25331.1| protein of unknown function DUF140 [Ralstonia pickettii 12J]
 gi|308921194|gb|EFP66838.1| competence protein ComM [Ralstonia sp. 5_7_47FAA]
          Length = 374

 Score =  299 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 101/371 (27%), Positives = 187/371 (50%), Gaps = 12/371 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +G +V   +G+W +  ++E A         ++   ++    L+ +  ID  GA+L+    
Sbjct: 15  DGRSVAFLSGDWTTLALAERAGVRSARQQIRAGLDNANAWCLTEVGRIDHFGAQLLW--- 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            +  G    + +    +Q   ++    +      K + +   N    L    G+ ++ F 
Sbjct: 72  -RAWGNQWPEHLDARPDQ-RRMLDRVAKLDPGGWKQRLAPRMNPVAIL----GEGMLDFF 125

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           + + +   ++G ++ + G F  + +  +G    +   +Y  G   + +  L+ F+ G V+
Sbjct: 126 DHAGNGIAMVGQLVFDLGRFVRAPH--RGPWREISANIYSTGYKALGITALVGFLIGIVL 183

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           +   A QL  FGA IF ++++ +  +RE+G +L A+++AGRSGSAI A+IG M++ EE+D
Sbjct: 184 SYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELD 243

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R MG+     LI P++ AL I++PLL    +  A+ G  +      DI    F +   
Sbjct: 244 AMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITSLP 303

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               +AN++ G+ K       I +VA   G  +  ++ SLG+  TT VV SI+IVI+ D+
Sbjct: 304 DAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIVILADA 363

Query: 363 LFAIFYFAIGI 373
           +FAI +  +GI
Sbjct: 364 VFAILFKDVGI 374


>gi|163843287|ref|YP_001627691.1| hypothetical protein BSUIS_A1062 [Brucella suis ATCC 23445]
 gi|163674010|gb|ABY38121.1| protein of unknown function DUF140 [Brucella suis ATCC 23445]
          Length = 391

 Score =  299 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 158/373 (42%), Positives = 229/373 (61%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI   
Sbjct: 23  EQDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81

Query: 62  MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++   K   ++L+GV      L   +     + +   + +  FF+ +F N+   +G  +
Sbjct: 82  RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ND     HILG  I   G            + +++ QM  +GV  +P+V+L+S + 
Sbjct: 139 ISMFNDFKMAMHILGATIR--GAQLKYGRGNGIPIAAIVTQMDRMGVGAIPIVVLMSTIV 196

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F 
Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY  I
Sbjct: 377 VVDGLFAMFYATI 389


>gi|161618971|ref|YP_001592858.1| hypothetical protein BCAN_A1034 [Brucella canis ATCC 23365]
 gi|254704312|ref|ZP_05166140.1| hypothetical protein Bsuib36_10354 [Brucella suis bv. 3 str. 686]
 gi|260566441|ref|ZP_05836911.1| sulfate transporter/antisigma-factor [Brucella suis bv. 4 str. 40]
 gi|261754981|ref|ZP_05998690.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|161335782|gb|ABX62087.1| protein of unknown function DUF140 [Brucella canis ATCC 23365]
 gi|260155959|gb|EEW91039.1| sulfate transporter/antisigma-factor [Brucella suis bv. 4 str. 40]
 gi|261744734|gb|EEY32660.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
          Length = 391

 Score =  299 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 158/373 (42%), Positives = 229/373 (61%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI   
Sbjct: 23  EQDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81

Query: 62  MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++   K   ++L+GV      L   +     + +   + +  FF+ +F N+   +G  +
Sbjct: 82  RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ND     HILG  I   G            + +++ QM  +GV  +P+V+L+S + 
Sbjct: 139 ISMFNDFKMAMHILGATIR--GAQLKYGRGNGIPIAAIVTQMDRMGVGAIPIVVLMSTIV 196

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F 
Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           S  H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 317 SHLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 377 VVDGLFAMFYAAI 389


>gi|70733612|ref|YP_257252.1| ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68347911|gb|AAY95517.1| ABC transporter, permease protein, putative [Pseudomonas
           fluorescens Pf-5]
          Length = 382

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 123/366 (33%), Positives = 198/366 (54%), Gaps = 7/366 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM--EKYH 66
            R  G+W     S++   +  +++    S S  +DL+ +  +DT GA L++  +  E+  
Sbjct: 21  LRIGGDWTLAHYSDLKR-LSQSLDGRYDS-STHIDLNGLGALDTAGASLLVELLGAERLG 78

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
              +    +       +L+   +        P +    +    L   IG  +     D+ 
Sbjct: 79  QSAEHPDCTLSAAD-RALLHTVYTSLNDFCVPVKEPEISVSVQLLSRIGSAVYTVWQDTL 137

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
                +GL++           +++  +  ++  +   G+   P+V L++F+ GAV+A  G
Sbjct: 138 KVLGFIGLILETLARGLLRPKRWR--ITPVVAHIEQTGLDAAPIVALLTFLVGAVVAFLG 195

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A  L+ FGA IF++DL++   LRE GVLLTA+++AGR+ SA  A+IGSMK NEEIDAIRT
Sbjct: 196 ATVLANFGASIFTVDLVAFSFLREFGVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRT 255

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +GLD V +L+ PR+ AL++SLP+LT LA  S I+G ++V     DI  A+F S  HS   
Sbjct: 256 LGLDPVELLVLPRVLALLVSLPMLTFLAMLSGIVGGAVVCALSLDISPAMFLSLLHSDIG 315

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           + +   GL+KAP  A  I  +   EGF V   + S+G   T+ VVQSI +VI+ID++ A+
Sbjct: 316 VKHFLLGLVKAPIFAFLIAAIGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVIDAVAAL 375

Query: 367 FYFAIG 372
           F+  +G
Sbjct: 376 FFMEMG 381


>gi|332187454|ref|ZP_08389192.1| hypothetical protein SUS17_2546 [Sphingomonas sp. S17]
 gi|332012615|gb|EGI54682.1| hypothetical protein SUS17_2546 [Sphingomonas sp. S17]
          Length = 368

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 112/364 (30%), Positives = 188/364 (51%), Gaps = 14/364 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            RF GN     + ++ + +        ++    +DLS +  IDT+GA L+  F  +    
Sbjct: 17  LRFTGNLSLATLGDLPERLDRE-----EASVQRIDLSQVDRIDTVGAWLVHRFAARNDAA 71

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
           I+  G+  +   L   +    +      +P      + F  +   +G  ++         
Sbjct: 72  IE--GLDENQRNLVDKVVEADQPVAMRPQP-----ISPFARVAGEVGDAVITAFKTLYGL 124

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G  +           +F+    +++ +   VGVS + ++ L+SF+ G VIAQQGA 
Sbjct: 125 LGFMGATVIAGFAVLRHPRRFR--FNAVVHEFETVGVSALAIIGLMSFLIGIVIAQQGAV 182

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           QL QFGAE+F+I+L+  L LRE+GVL+TA+M+AGRSGSA  A++G+MK+ EEIDA+R +G
Sbjct: 183 QLRQFGAEVFTINLVGRLTLRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEIDAMRVIG 242

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +  +  L+ PR  A +  +PLL   ++  A+IG   +      IP   F +R      + 
Sbjct: 243 VSPMEALVLPRTIAAVTLMPLLGFYSSLIAMIGGCFLAAVSLGIPPVTFIARIREVVPIT 302

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +++ GLIKAP     I I    +G  V   +  +G + T  VVQ+I +VI++D+ FA+F+
Sbjct: 303 DLYVGLIKAPVFGAIIAIAGCFQGMQVKSDAEQVGLRTTAAVVQAIFLVIVLDAFFAVFF 362

Query: 369 FAIG 372
             +G
Sbjct: 363 TWLG 366


>gi|84622391|ref|YP_449763.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188578633|ref|YP_001915562.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|84366331|dbj|BAE67489.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188523085|gb|ACD61030.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 370

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 120/364 (32%), Positives = 193/364 (53%), Gaps = 13/364 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R AG+W        A+     + +++      +D   I ++D+ G   ++ F  +   K
Sbjct: 19  LRLAGSWVLATALPQAE-----LLQTVPDGVRRIDARGIQQLDSAGVLQLLRFASRIGLK 73

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
                     +   +L+        +  KP+R +    F      +G+   +   D    
Sbjct: 74  EDAIDFRDEHQ---ALVCTIEELNDERPKPKRDY---GFVAALDRLGRATHRIGQDILEL 127

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG  +           +F+  L S +  M  VG+  VP+V+L+S++ GAVIA  G+ 
Sbjct: 128 NSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFLGST 185

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAIRT+G
Sbjct: 186 ILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIRTLG 245

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD + +L+ PR+ ALI +LPLLT +A  + + G   V     DIP  ++ +R H T  L 
Sbjct: 246 LDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHETIQLR 305

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ A+++
Sbjct: 306 HFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWF 365

Query: 369 FAIG 372
             +G
Sbjct: 366 MKMG 369


>gi|225627497|ref|ZP_03785534.1| toulene ABC transporter permease protein [Brucella ceti str. Cudo]
 gi|260168729|ref|ZP_05755540.1| Sulfate transporter/antisigma-factor [Brucella sp. F5/99]
 gi|261758207|ref|ZP_06001916.1| sulfate transporter/antisigma-factor [Brucella sp. F5/99]
 gi|225617502|gb|EEH14547.1| toulene ABC transporter permease protein [Brucella ceti str. Cudo]
 gi|261738191|gb|EEY26187.1| sulfate transporter/antisigma-factor [Brucella sp. F5/99]
          Length = 391

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 159/373 (42%), Positives = 229/373 (61%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI   
Sbjct: 23  EQDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81

Query: 62  MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++   K   ++L+GV      L   +     + +   + +  FF+ +F N+   +G  +
Sbjct: 82  RQRLAAKYVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ND     HILG  I   G            + +++ QM   GV  +P+V+L+S + 
Sbjct: 139 ISMFNDFKMAMHILGATIR--GAQLKYGRGNGIPIAAIVTQMDRTGVGAIPIVVLMSTIV 196

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F 
Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 377 VVDGLFAMFYAAI 389


>gi|254714105|ref|ZP_05175916.1| Sulfate transporter/antisigma-factor [Brucella ceti M644/93/1]
 gi|254716838|ref|ZP_05178649.1| Sulfate transporter/antisigma-factor [Brucella ceti M13/05/1]
 gi|261218640|ref|ZP_05932921.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261321862|ref|ZP_05961059.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|260923729|gb|EEX90297.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261294552|gb|EEX98048.1| conserved hypothetical protein [Brucella ceti M644/93/1]
          Length = 391

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 159/373 (42%), Positives = 229/373 (61%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++GI V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI   
Sbjct: 23  EQDGIRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81

Query: 62  MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++   K   ++L+GV      L   +     + +   + +  FF+ +F N+   +G  +
Sbjct: 82  RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ND     HILG  I   G            + +++ QM  +GV  +P+V+L+S + 
Sbjct: 139 ISMFNDFKMAMHILGATIR--GAQLKYGRGNGIPIAAIVTQMDRMGVGAIPIVVLMSTIV 196

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAEIF +DL+ IL LRE+G LLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGGLLTAIMIAGRSGSAITAEIGSMKMR 256

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F 
Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 377 VVDGLFAMFYAAI 389


>gi|254689249|ref|ZP_05152503.1| Sulfate transporter/antisigma-factor [Brucella abortus bv. 6 str.
           870]
 gi|260754755|ref|ZP_05867103.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260674863|gb|EEX61684.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
          Length = 391

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 159/373 (42%), Positives = 230/373 (61%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI   
Sbjct: 23  EQDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81

Query: 62  MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++   K   ++L+GV      L   +     + +   + +  FF+ +F N+   +G  +
Sbjct: 82  RQRLAAKYVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ND     HILG  I   G            + +++ QM  +GV  +P+V+L+S + 
Sbjct: 139 ISMFNDFKMAMHILGATIR--GAQLKYGRGNGIPIAAIVTQMDRMGVGAIPIVVLMSTIV 196

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F 
Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 377 VVDGLFAMFYAAI 389


>gi|330806719|ref|YP_004351181.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327374827|gb|AEA66177.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 382

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 116/361 (32%), Positives = 194/361 (53%), Gaps = 7/361 (1%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM--EKYHGKIK 70
           G+W     +++   +  ++      ++  +DL+ +  +DT GA L++  +  E+     +
Sbjct: 25  GDWTLAHYAQLKR-LSESLRGQYDENTL-IDLNGLGALDTAGASLLVELLGSERLGKTTE 82

Query: 71  LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAH 130
               S    +  +L+   +        P +         L   IG+ + K   D+     
Sbjct: 83  HPDCSLPAAE-RALLQTVYCSLTDFCVPVKEPQVGVLTQLLTRIGRAVEKVWQDTLQLLG 141

Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190
            +GL++           +++  +  ++  +   G+   P+V L++F+ GAV+A  GA  L
Sbjct: 142 FVGLILETLARNLLRPRRWR--MTPMVVHIEQTGLDAAPIVALLTFLVGAVVAFLGATVL 199

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
           + FGA IF++DL++   LRE GVLLTA+++AGR+ SA  A+IGSMK NEEIDAIRT+GLD
Sbjct: 200 ADFGASIFTVDLVAFSFLREFGVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRTLGLD 259

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
            V +L+ PR+ AL+++LP+LT LA  S IIG  +V      I  A+F +   S   + + 
Sbjct: 260 PVELLVIPRVLALLVALPMLTFLAMLSGIIGGGVVCALSLGISPAMFLTLLQSDIGVQHF 319

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             G++KAP  A  I  V   EGF V   + S+G   T+ VVQSI +VI++D++ A+F+  
Sbjct: 320 LVGMVKAPIFAFLIAAVGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVLDAVAALFFME 379

Query: 371 I 371
           +
Sbjct: 380 M 380


>gi|256061111|ref|ZP_05451265.1| hypothetical protein Bneo5_12197 [Brucella neotomae 5K33]
 gi|261325112|ref|ZP_05964309.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261301092|gb|EEY04589.1| conserved hypothetical protein [Brucella neotomae 5K33]
          Length = 391

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 158/373 (42%), Positives = 229/373 (61%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI   
Sbjct: 23  EQDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81

Query: 62  MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++   K   ++L+GV      L   +     + +   + +  FF+ +F N+   +G  +
Sbjct: 82  RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ND     HILG  I   G            + +++ QM  +GV  +P+V+L+S + 
Sbjct: 139 ISMFNDFKMAMHILGATIR--GAQLKYGRGNGIPIAAIVTQMDRMGVGAIPIVVLMSTIV 196

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL++ LP LTIL++ SA++GA+ V W Y +I    F 
Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPPLTILSDLSALVGAAGVSWLYSNISPEAFI 316

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 377 VVDGLFAMFYAAI 389


>gi|254693733|ref|ZP_05155561.1| hypothetical protein Babob3T_03544 [Brucella abortus bv. 3 str.
           Tulya]
 gi|261214007|ref|ZP_05928288.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
 gi|260915614|gb|EEX82475.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
          Length = 391

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 159/373 (42%), Positives = 230/373 (61%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI   
Sbjct: 23  EQDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81

Query: 62  MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++   K   ++L+GV      L   +     + +   + +  FF+ +F N+   +G  +
Sbjct: 82  RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ND     HILG  I   G            + +++ QM  +GV  +P+V+L+S + 
Sbjct: 139 ISMFNDFKMAMHILGATIR--GAQLKYGRGNGIPIAAIVTQMDRMGVGAIPIVVLMSTIV 196

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F 
Sbjct: 257 EETDALTVIGLNPVGVLVFPRLAALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 377 VVDGLFAMFYAAI 389


>gi|116690919|ref|YP_836542.1| hypothetical protein Bcen2424_2901 [Burkholderia cenocepacia
           HI2424]
 gi|116649008|gb|ABK09649.1| protein of unknown function DUF140 [Burkholderia cenocepacia
           HI2424]
          Length = 447

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 102/366 (27%), Positives = 173/366 (47%), Gaps = 11/366 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             R  G W +  ++     V   I        +  DLS I  +D +G + +     +  G
Sbjct: 92  TVRLTGQWTALSLARNRGAVARRIASIAAGRVSEWDLSGIERLDHVGGQALW----RVWG 147

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
           +    GV+    Q  ++     R   + + P+R   ++    L    G  I  F      
Sbjct: 148 RKLPAGVALSATQ-RTIFERIERLDSEREAPERIVRFDPVTRL----GLAIFAFGEHLQG 202

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              + G VI +                     +Y  G   +P+  L++F+ G V++   A
Sbjct: 203 GITMFGRVILDALSVLRRPKTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 260

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M
Sbjct: 261 QQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 320

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     LI PR+ AL +++PLL +  N  A+ G ++       I    F         +
Sbjct: 321 GIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKLVLGIDINYFVRSLPGVVPI 380

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN++ G+ K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI 
Sbjct: 381 ANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIL 440

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 441 FQNVGL 446


>gi|170724242|ref|YP_001751930.1| hypothetical protein PputW619_5085 [Pseudomonas putida W619]
 gi|169762245|gb|ACA75561.1| protein of unknown function DUF140 [Pseudomonas putida W619]
          Length = 377

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 121/365 (33%), Positives = 193/365 (52%), Gaps = 9/365 (2%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH-G 67
            R AG+W     + +  D      ++     A+ DLS + ++DT GA L+   +      
Sbjct: 20  LRIAGDWTLAHYASLKRDSERL--RTQYDADAVADLSQLGQLDTAGASLLAELLGSERLS 77

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
               +        L ++        I  ++P+R         L   IG+ +     D+  
Sbjct: 78  HCTQELPDASRALLKNVYCSVQDYCIPVKEPERHV----LILLLERIGRAVNTLWQDTLQ 133

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +GL++          ++++  L  ++  +   G+   P+V L++F+ GAV+A  GA
Sbjct: 134 LLGFIGLILETLLRRALQPHRWR--LTPVVSHIEQTGLDAAPIVALLTFLVGAVVAFLGA 191

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L+ FGA +F++DL++   LRE  VLLTA+++AGR+ SA  A+IGSMK NEEIDAIRT+
Sbjct: 192 TVLADFGATVFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRTL 251

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GL+ + +L+ PR+ AL+ISLPLLT +A    I+G ++V     DI  A+F S   S   +
Sbjct: 252 GLNPIELLVVPRVLALLISLPLLTFVAMICGIVGGAVVCALSLDISPAMFLSLLQSDIGV 311

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   GL KAPF A  I  +   EGF V   + S+G   T+ VVQSI +VI++D++ A+F
Sbjct: 312 QHFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVLDAVAALF 371

Query: 368 YFAIG 372
              +G
Sbjct: 372 CMEMG 376


>gi|239831972|ref|ZP_04680301.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
 gi|239824239|gb|EEQ95807.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
          Length = 391

 Score =  299 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 157/373 (42%), Positives = 224/373 (60%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
             +G+   R  G W S  +  + DD V  +  + + ++ I+D+S ++ +DT GA LI   
Sbjct: 23  EHDGVRHIRMNGRWVSQSV-NLVDDKVRRLENADKREATIIDISGVSGLDTAGAWLIERL 81

Query: 62  MEKYHG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++      +++L+GV      L   +     + +   + ++ FF  SF      +G  +
Sbjct: 82  RQRLVAQQVEVQLEGVRQSWLPLMEEVGQAVERTLDIPRQKKPFFLISF---LAALGGGV 138

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           V   +D     HILG  I   G              +++ QM  +GV  +P++IL+S + 
Sbjct: 139 VSLGSDFKMAMHILGATIR--GAQLKYGRGSGIPFAAIVTQMDRMGVGAIPIIILMSTIV 196

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL+I LPLLTI+++ +A+IGA  V W Y +I    F 
Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVIVLPLLTIVSDLAALIGAGGVAWFYSNISPDAFI 316

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 377 VVDGLFAMFYAAI 389


>gi|167031179|ref|YP_001666410.1| hypothetical protein PputGB1_0158 [Pseudomonas putida GB-1]
 gi|166857667|gb|ABY96074.1| protein of unknown function DUF140 [Pseudomonas putida GB-1]
          Length = 377

 Score =  299 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 120/365 (32%), Positives = 193/365 (52%), Gaps = 9/365 (2%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R  G+W     + +  +      ++  +   + DLS +  +DT GA L+   +      
Sbjct: 20  LRITGDWTLAHYANLKRESEQL--RTQYAADTVADLSQLGRLDTAGASLLAELLGSERLS 77

Query: 69  IKLQGVSTHIEQLF-SLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
              Q +      L  ++        I  ++P+R    N    L   IG+ +     DS  
Sbjct: 78  RCTQDLPEASRALLKNVYCSVQDYCIPVKEPER----NVLLMLLERIGRAVGTLWQDSMQ 133

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +G+++          ++++     ++  +   G+   P+V L++F+ GAV+A  GA
Sbjct: 134 LLGFVGVILETLLRRALQPHRWR--FTPVVAHIEQTGLDAAPIVALLTFLVGAVVAFLGA 191

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L+ FGA IF++DL++   LRE  VLLTA+++AGR+ SA  A+IGSMK NEEIDAIRT+
Sbjct: 192 TVLADFGATIFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRTL 251

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GL+ + +L+ PR+ AL+ISLPLLT +A    +IG ++V     DI  A+F S   S   +
Sbjct: 252 GLNPMELLVVPRVLALLISLPLLTFVAMICGMIGGAVVCALTLDISPAMFLSLLQSDIGV 311

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   GL KAPF A  I  +   EGF V   + S+G   T+ VVQSI +VI++D++ A+F
Sbjct: 312 QHFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVIVLDAVAALF 371

Query: 368 YFAIG 372
           +  +G
Sbjct: 372 FMEMG 376


>gi|296284592|ref|ZP_06862590.1| putative ABC transport system permease protein [Citromicrobium
           bathyomarinum JL354]
          Length = 370

 Score =  299 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 117/371 (31%), Positives = 191/371 (51%), Gaps = 14/371 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            + G TV R  G +    I+ +   +    +     D A      ++EIDT+GA      
Sbjct: 12  GDGGRTVLRLKGPYLLSTIANVDRGLRKLDDDIDVIDLA-----EVSEIDTVGAWFACTL 66

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
              +   I+    S   ++L + +  +      N     +            +G+K+ + 
Sbjct: 67  ARNHSASIE--NASERADRLLTAVGES-----ANSSDVSAPRLPLLTRAPEAMGEKVFEA 119

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                S     G +++          +F+    +++ Q   VGV+ +P++ L+SF+ G V
Sbjct: 120 GRGIVSVVGFFGQILAGAASLIRHPRRFRH--RAMVHQFESVGVNALPIIGLMSFLIGIV 177

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IAQQGA QL  FGAE  +++L+  + LRE+GVL+TA+M+AGRSGSA  A+IG+MK+ EEI
Sbjct: 178 IAQQGAVQLQAFGAEALTVNLVGRITLRELGVLMTAIMVAGRSGSAFAAQIGTMKLTEEI 237

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+RT+G+  V +L+ PR+ A +  + LL   A+  AIIG ++V      IPF  F  R 
Sbjct: 238 DAMRTIGISPVEVLVIPRLVACVFMMILLGFYASCMAIIGGAVVSDVMLGIPFWTFLMRI 297

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           H      +++ G+IKAP     +G+    +G  V  +S  +G + T  VVQ+I  VI++D
Sbjct: 298 HEVVPAHDVWVGMIKAPVFGLIVGMSGCYQGMQVRGNSEEVGLRTTKAVVQAIFTVIVLD 357

Query: 362 SLFAIFYFAIG 372
           + FA+F+  IG
Sbjct: 358 AFFAVFFTGIG 368


>gi|148555653|ref|YP_001263235.1| hypothetical protein Swit_2742 [Sphingomonas wittichii RW1]
 gi|148500843|gb|ABQ69097.1| protein of unknown function DUF140 [Sphingomonas wittichii RW1]
          Length = 365

 Score =  299 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 116/365 (31%), Positives = 190/365 (52%), Gaps = 14/365 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           V  F G      I +++  +     +++      +DL  +  IDT+GA L+     ++  
Sbjct: 13  VLHFTGALTLARIGDLSRRL-----EALDEVPRTIDLGEVDRIDTVGAWLVHRIAREH-- 65

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
            +++ G    + QL   I+   +         R      F  +   IG       +    
Sbjct: 66  DVEIVGADADVCQLIEQIAEADK-----PLKIRPDSSPPFFRVLREIGDATSAAAHSLAG 120

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
                G  +           +F+    ++ RQ   VGV  + ++ L+SF+ G VIAQQGA
Sbjct: 121 LIGFFGATLIGLWGLVTHPRRFR--YNAMARQFEVVGVKALAIIGLMSFLIGIVIAQQGA 178

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL QFGAE+F+++L+  + LRE+GVL+TA+M+AGRSGSA  A++GSMK+ EE+DA+RT+
Sbjct: 179 VQLRQFGAEVFAVNLIGRITLRELGVLMTAIMVAGRSGSAFAAQLGSMKLAEEVDAMRTI 238

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+  +  LI PR+ + ++ +PLL   A   AIIG  I  W   DIP   +  R      +
Sbjct: 239 GVSPMEALILPRVLSTVVLMPLLGFYAAVIAIIGGGIFCWIDLDIPPITYVQRIREVVPM 298

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +++ GLIKAP     I +    +G  V  ++  +G + T  VVQ+I +VI++D++FA+F
Sbjct: 299 TDLWVGLIKAPVFGMLIALCGCYQGMQVEGNAEEVGLRTTASVVQAIFLVIVLDAVFAVF 358

Query: 368 YFAIG 372
           + +IG
Sbjct: 359 FSSIG 363


>gi|21244295|ref|NP_643877.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21109945|gb|AAM38413.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 370

 Score =  299 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 120/364 (32%), Positives = 193/364 (53%), Gaps = 13/364 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R AG+W        A+     + +++      +D   I ++D+ G   ++ F  +   K
Sbjct: 19  VRLAGSWVLATALPQAE-----LLQAVPDGVRRIDARGIQQLDSAGVLQLLRFAGRMGLK 73

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
                     +   +L+        +  KP+R +    F      +G+   +   D    
Sbjct: 74  EDAIDFRDEHQ---ALVCTIEELNDERPKPKRDY---GFVAALDRLGRATHRVGQDILEL 127

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG  +           +F+  L S +  M  VG+  VP+V+L+S++ GAVIA  G+ 
Sbjct: 128 NSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFLGST 185

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAIRT+G
Sbjct: 186 ILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIRTLG 245

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD + +L+ PR+ ALI +LPLLT +A  + + G   V     DIP  ++ +R H T  L 
Sbjct: 246 LDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDTIQLR 305

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ A+++
Sbjct: 306 HFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWF 365

Query: 369 FAIG 372
             +G
Sbjct: 366 MKMG 369


>gi|325928564|ref|ZP_08189752.1| putative integral membrane protein [Xanthomonas perforans 91-118]
 gi|325541103|gb|EGD12657.1| putative integral membrane protein [Xanthomonas perforans 91-118]
          Length = 370

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 120/364 (32%), Positives = 193/364 (53%), Gaps = 13/364 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R AG+W        A+     + +++      +D   I ++D+ G   ++ F  +   K
Sbjct: 19  VRLAGSWVLATALPQAE-----LLQAVPDGVRRIDARGIQQLDSAGVLQLLRFAGRMGLK 73

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
                     +   +L+        +  KP+R +    F      +G+   +   D    
Sbjct: 74  EDAIDFRDEHQ---ALVCTIEELNDERPKPKRDY---GFVAALDRLGRATHRVGQDILEL 127

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG  +           +F+  L S +  M  VG+  VP+V+L+S++ GAVIA  G+ 
Sbjct: 128 NSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFLGST 185

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAIRT+G
Sbjct: 186 ILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIRTLG 245

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD + +L+ PR+ ALI +LPLLT +A  + + G   V     DIP  ++ +R H T  L 
Sbjct: 246 LDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHETIQLR 305

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ A+++
Sbjct: 306 HFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWF 365

Query: 369 FAIG 372
             +G
Sbjct: 366 MKMG 369


>gi|241761770|ref|ZP_04759856.1| protein of unknown function DUF140 [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|241373684|gb|EER63244.1| protein of unknown function DUF140 [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 366

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 122/364 (33%), Positives = 188/364 (51%), Gaps = 15/364 (4%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
               G      +  +++ +       + SD  ++DLS +  +DT GA L+    +  + +
Sbjct: 16  LALQGVLTLAHLDSLSNTL------QMLSDVKVIDLSNLHRMDTAGAWLVHKLAQDNNAE 69

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
           +K  G ++ +  +   IS   R      K       +        +GK  V         
Sbjct: 70  VK--GTNSAVAHILDQISHYDRPLPPEPKA-----VSPLIYTLTGVGKNTVHVWYTIVGL 122

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
            +  G ++ +         + +  L ++I QM  VGV+ + +V L+S + G VIAQQGA 
Sbjct: 123 VNFFGALLVSIWHTICHPSRLR--LTAIICQMETVGVNALAIVGLMSILVGVVIAQQGAV 180

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           QL QFGAEI+SI+L+  L  RE+GVL+TA+M+AGRSGSA  A+IGSM + EEIDA+R +G
Sbjct: 181 QLRQFGAEIYSINLVGRLSFRELGVLMTAIMVAGRSGSAFAAQIGSMNLAEEIDAMRIIG 240

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +  +  L+ PR  A II +PLL   A  +A+IG  ++ W   DIP   FF+R        
Sbjct: 241 VSPMESLVLPRFLASIIMMPLLGFYATIAAVIGGGLLCWTVLDIPPTTFFTRLREVIPYT 300

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           ++  GL+KAP     I I    +G  V  ++  LG   T  VV SI +VI++D+ FA+F+
Sbjct: 301 DVAVGLVKAPIFGALIAIAGCFQGTQVKGNAEQLGYCTTKAVVHSIFLVIVLDAFFAVFF 360

Query: 369 FAIG 372
             IG
Sbjct: 361 SEIG 364


>gi|294624127|ref|ZP_06702865.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|294663966|ref|ZP_06729386.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292601572|gb|EFF45571.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292606261|gb|EFF49492.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 370

 Score =  298 bits (764), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 120/364 (32%), Positives = 196/364 (53%), Gaps = 13/364 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R AG+W        A +++ A+ + ++     +D   I ++D+ G   ++ F  +   K
Sbjct: 19  VRLAGSWVLATALPQA-ELLQAVPEGVRR----IDARGIQQLDSAGVLQLLRFAGRMGLK 73

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
                     +   +L+        +  KP+R +    F      +G+   +   D    
Sbjct: 74  EDAIDFRDEHQ---ALVCTIEELNDERPKPKRDY---GFVAALDRLGRATHRVGQDILEL 127

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG  +           +F+  L S +  M  VG+  VP+V+L+S++ GAVIA  G+ 
Sbjct: 128 NSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFLGST 185

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAIRT+G
Sbjct: 186 ILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIRTLG 245

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD + +L+ PR+ AL+ +LPLLT +A  + + G   V     DIP  ++ +R H T  L 
Sbjct: 246 LDPIDLLVIPRLLALVFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDTIQLR 305

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ A+++
Sbjct: 306 HFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWF 365

Query: 369 FAIG 372
             +G
Sbjct: 366 MKMG 369


>gi|260752530|ref|YP_003225423.1| hypothetical protein Za10_0287 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|283856391|ref|YP_162753.2| hypothetical protein ZMO1018 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|258551893|gb|ACV74839.1| protein of unknown function DUF140 [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|283775390|gb|AAV89642.2| protein of unknown function DUF140 [Zymomonas mobilis subsp.
           mobilis ZM4]
          Length = 366

 Score =  298 bits (764), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 122/364 (33%), Positives = 187/364 (51%), Gaps = 15/364 (4%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
               G      +  +++ +         SD  ++DLS +  +DT GA L+    +  + +
Sbjct: 16  LALQGVLTLAHLDSLSNTL------QTLSDVKVIDLSNLHRMDTAGAWLVHKLAQDNNAE 69

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
           +K  G ++ +  +   IS   R      K       +        +GK  V         
Sbjct: 70  VK--GTNSAVAHILDQISHYDRPLPPEPKA-----VSPLIYTLTGVGKNTVHVWYTIVGL 122

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
            +  G ++ +         + +  L ++I QM  VGV+ + +V L+S + G VIAQQGA 
Sbjct: 123 VNFFGALLVSIWHTICHPSRLR--LTAIICQMETVGVNALAIVGLMSILVGVVIAQQGAV 180

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           QL QFGAEI+SI+L+  L  RE+GVL+TA+M+AGRSGSA  A+IGSM + EEIDA+R +G
Sbjct: 181 QLRQFGAEIYSINLVGRLSFRELGVLMTAIMVAGRSGSAFAAQIGSMNLAEEIDAMRIIG 240

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +  +  L+ PR  A II +PLL   A  +A+IG  ++ W   DIP   FF+R        
Sbjct: 241 VSPMESLVLPRFLASIIMMPLLGFYATIAAVIGGGLLCWTVLDIPPTTFFTRLREVIPYT 300

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           ++  GL+KAP     I I    +G  V  ++  LG   T  VV SI +VI++D+ FA+F+
Sbjct: 301 DVAVGLVKAPIFGALIAIAGCFQGTQVKGNAEQLGYCTTKAVVHSIFLVIVLDAFFAVFF 360

Query: 369 FAIG 372
             IG
Sbjct: 361 SEIG 364


>gi|254719095|ref|ZP_05180906.1| Sulfate transporter/antisigma-factor [Brucella sp. 83/13]
 gi|265984086|ref|ZP_06096821.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|306838379|ref|ZP_07471224.1| Sulfate transporter/antisigma-factor [Brucella sp. NF 2653]
 gi|264662678|gb|EEZ32939.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|306406519|gb|EFM62753.1| Sulfate transporter/antisigma-factor [Brucella sp. NF 2653]
          Length = 391

 Score =  298 bits (764), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 158/373 (42%), Positives = 229/373 (61%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI   
Sbjct: 23  EQDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81

Query: 62  MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++   K   ++L+GV      L   +     + +   + +  FF+ +F N+   +G  +
Sbjct: 82  RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ND     HILG  I   G            + +++ QM  +GV  +P+V+L+S + 
Sbjct: 139 ISMFNDFKMAMHILGATIR--GAQLKYGRGNGIPIAAIVTQMDRMGVGAIPIVVLMSTIV 196

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FG EIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 197 GAIIAQQGAFQLRYFGTEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F 
Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 377 VVDGLFAMFYAAI 389


>gi|26986887|ref|NP_742312.1| hypothetical protein PP_0142 [Pseudomonas putida KT2440]
 gi|24981490|gb|AAN65776.1|AE016203_9 ABC transporter, permease protein, putative [Pseudomonas putida
           KT2440]
          Length = 377

 Score =  298 bits (763), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 120/365 (32%), Positives = 192/365 (52%), Gaps = 9/365 (2%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R  G+W     + +  +      +S      + DLS +  +DT GA L+   +      
Sbjct: 20  LRITGDWTLAHYANLKRESERL--RSHCPADTVADLSQLGRLDTAGASLLAELLGSERLS 77

Query: 69  IKLQGVSTHIEQLF-SLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
                +    + L  ++        I  ++P+R    N    L   IG+ +     DS  
Sbjct: 78  HCTHALPEASQALLKNVYCSVQDYCIPVKEPER----NVLLLLLERIGRAVGTLWQDSMQ 133

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +G+++          ++++     ++  +   G+   P+V L++F+ GAV+A  GA
Sbjct: 134 LLGFVGVILETLLRRAFQPHRWR--FTPVVAHIEQTGLDAAPIVALLTFLVGAVVAFLGA 191

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L+ FGA IF++DL++   LRE  VLLTA+++AGR+ SA  A+IGSMK NEEIDAIRT+
Sbjct: 192 TVLADFGATIFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRTL 251

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GL+ + +L+ PR+ AL+ISLPLLT +A    I+G ++V     DI  A+F S   S   +
Sbjct: 252 GLNPMELLVVPRVLALLISLPLLTFVAMICGIVGGAVVCALTLDISPAMFLSLLQSDIGV 311

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   GL KAPF A  I  +   EGF V   + S+G   T+ VVQSI +VI++D++ A+F
Sbjct: 312 QHFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVIVLDAVAALF 371

Query: 368 YFAIG 372
           +  +G
Sbjct: 372 FMEMG 376


>gi|90422963|ref|YP_531333.1| hypothetical protein RPC_1452 [Rhodopseudomonas palustris BisB18]
 gi|90104977|gb|ABD87014.1| protein of unknown function DUF140 [Rhodopseudomonas palustris
           BisB18]
          Length = 377

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 129/376 (34%), Positives = 207/376 (55%), Gaps = 11/376 (2%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           ++         AG+W +P    +   V  A   S    +  +D+SA+ ++DT GA LI  
Sbjct: 10  IARGNGLALCAAGSWTAPFAPVLERIVAEAEALSGTRPNISIDVSAVAKLDTFGAWLIER 69

Query: 61  FMEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
                     +  + G+S +   L   +     +++K+ +P +     S +     +G+ 
Sbjct: 70  LRRSLTQGDAEATIAGLSANYSSLVDEV-----RRVKDPEPSKRGGI-SLRAPVERLGRS 123

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +  F++       + G V++           F+  L S +  +  V    VP+V+LI+F+
Sbjct: 124 VAGFLDTIVGLVAMTGAVMAGMLRVVMHPGSFR--LTSTVHHLEQVCWRAVPIVMLITFL 181

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G ++AQQG F   +FGA++F +D++ +L LRE+GVLL A+M+AGRSGSA  AE+GSMK+
Sbjct: 182 IGCIVAQQGIFHFRKFGADVFVVDMLGVLVLRELGVLLVAIMVAGRSGSAYTAELGSMKM 241

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EEIDA+RTMG D + +LI PR+ AL++++P+LT L   +A+ G  +V W Y  +    F
Sbjct: 242 REEIDALRTMGFDPIDVLIMPRMMALVLAMPILTFLGVVAALYGGGLVAWLYGGVDPDAF 301

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
             R     ++ +   G+IKAP MA  IGIVA  EG AV   + SLG+  T  VV+ I  V
Sbjct: 302 LLRLRDAISIDHFTVGMIKAPVMAIVIGIVACVEGLAVAGSAESLGRHTTASVVKGIFFV 361

Query: 358 IIIDSLFAIFYFAIGI 373
           I++D +FAIF+ +IG+
Sbjct: 362 IVMDGVFAIFFASIGM 377


>gi|118588764|ref|ZP_01546172.1| hypothetical protein SIAM614_18699 [Stappia aggregata IAM 12614]
 gi|118438750|gb|EAV45383.1| hypothetical protein SIAM614_18699 [Stappia aggregata IAM 12614]
          Length = 382

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 138/368 (37%), Positives = 210/368 (57%), Gaps = 12/368 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY--- 65
              +G+W    I++   ++        +     +D+S I  +DT GA LI     +    
Sbjct: 24  LALSGDWTVSTIADAERELNGLTLD--KKRLTCIDVSRIEHLDTSGAWLIHRTRGRLEFE 81

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
             K+ L GVS   + LF  I   H     + KP    F  S        G+++V   +D+
Sbjct: 82  GRKVGLSGVSPVRKTLFEEIENHHP---PSWKPDPGGF--SIAGFLEATGRQMVDVYHDA 136

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            +  HILG +            + +   +S+  Q     +  VP+V L+SF+ GA+I+QQ
Sbjct: 137 LAMLHILGSLGLVLSTVLLQPKRLRS--ISIAVQFDRSCIGAVPIVALMSFLIGAIISQQ 194

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           G F L QFGA+IF +DL  IL LREIGV+LTA+M+AGRSGSA  AE+G+M++ EE+DA+ 
Sbjct: 195 GGFYLRQFGADIFVVDLAGILVLREIGVILTAIMVAGRSGSAFTAELGAMRMQEEVDALH 254

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            +GL    +L+ PRI AL+I+LP+LT +++ +A+ G+ +V W Y DIP A F ++  +  
Sbjct: 255 VIGLSVTEVLVLPRILALMIALPILTFISDLAALFGSGMVTWAYLDIPPAAFLTQLQAAI 314

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           T+  +  GL+KAPFMA  +G++A  EG  V   S SLG+  T  VV++I +VI++D  FA
Sbjct: 315 TINTLVVGLVKAPFMALIVGLIACVEGLKVEGSSESLGRHTTMSVVKAIFLVIVVDGFFA 374

Query: 366 IFYFAIGI 373
           IF+ AIG+
Sbjct: 375 IFFAAIGV 382


>gi|254701770|ref|ZP_05163598.1| Sulfate transporter/antisigma-factor [Brucella suis bv. 5 str. 513]
 gi|261752323|ref|ZP_05996032.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|261742076|gb|EEY30002.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
          Length = 391

 Score =  297 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 158/373 (42%), Positives = 229/373 (61%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI   
Sbjct: 23  EQDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81

Query: 62  MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++   K   ++L+GV      L   +     + +   + +  FF+ +F N+   +G  +
Sbjct: 82  RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ND     HILG  I   G            + +++ QM  +GV  +P+V+L+S + 
Sbjct: 139 ISMFNDFKMAMHILGATIR--GAQLKYGRGNGIPIAAIVTQMDRMGVGAIPIVVLMSTIV 196

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V   Y +I    F 
Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSCLYSNISPEAFI 316

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 377 VVDGLFAMFYAAI 389


>gi|288962789|ref|YP_003453083.1| ABC transport system permease protein [Azospirillum sp. B510]
 gi|288915055|dbj|BAI76539.1| ABC transport system permease protein [Azospirillum sp. B510]
          Length = 401

 Score =  297 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 120/368 (32%), Positives = 196/368 (53%), Gaps = 10/368 (2%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
              AG W   E++  A D +          +  +DLS +  +DT+GA L+    ++    
Sbjct: 41  IAAAGRWTL-EVAAAASDALDHAAPPRDGAALRLDLSGVEALDTVGAYLLSRQADRMAAD 99

Query: 69  ---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
              +++ GV      LF  +    R   K         ++   ++    G+  V    + 
Sbjct: 100 GRAVEVVGVRPEHAALFDAV----RDAGKAPPHPIEREHHPIHDMVVRTGETTVHAAREV 155

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                 LGLV            + +  L S++  +   G++ +P++ L+SF+ G V+A Q
Sbjct: 156 LDLVGFLGLVTVTFVRLILRPSRLR--LTSVLFHIEQTGLNALPILGLLSFLIGVVLAFQ 213

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           GA QL +FGAE++ ++L+ I  LREIG+L+TA+++AGRSGSA  A+IG+MK+N+E+DAI 
Sbjct: 214 GADQLKRFGAELYVVNLLGISVLREIGILMTAIIVAGRSGSAFTAQIGTMKVNQEVDAIG 273

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           TMGLD V +L+ PR  AL+I+LPLL   A+   + G +++ +   DI F  F  + HS  
Sbjct: 274 TMGLDPVELLVVPRALALVITLPLLAFYADVMGLFGGAVMAYATLDITFGQFIRQLHSAI 333

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            +  +  GLIKAP  A  I +V   EG  V   + S+G   T  VV+ I +VI+ID++F+
Sbjct: 334 GINTVLAGLIKAPVFALVIAMVGCYEGLKVSGSAESVGIMTTKAVVEGIFLVIVIDAVFS 393

Query: 366 IFYFAIGI 373
           + +  +G+
Sbjct: 394 VLFSLLGV 401


>gi|94496554|ref|ZP_01303130.1| hypothetical protein SKA58_17657 [Sphingomonas sp. SKA58]
 gi|94423914|gb|EAT08939.1| hypothetical protein SKA58_17657 [Sphingomonas sp. SKA58]
          Length = 369

 Score =  297 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 113/371 (30%), Positives = 192/371 (51%), Gaps = 14/371 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
             +G TV R +GN     + ++   +      ++Q     VD+S +  IDTIGA  +   
Sbjct: 11  QRDGGTVIRLSGNLAIACLHDLPARLD-----AVQGPINAVDVSQVDHIDTIGAWTVHSA 65

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
            ++ +  I   G +   ++L   +       +      R    +    +   IG  ++  
Sbjct: 66  AKRLNAPI--TGANEDAQRLIEAVGT-----LDEPFSLRPDKVSPLTRVVGQIGDAVISA 118

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                      G  +           +F+  + +++++   VGVS + ++ L+SF+ G V
Sbjct: 119 GTTLMGLLGFFGASLVAAWGLIRHPSRFR--VNAVVQRFEVVGVSALGIIGLMSFLIGIV 176

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IAQQG+ QL QFG E+ +I+L+  L  RE+GVL+TA+M+AGRSGSA  A++G+MK+ EEI
Sbjct: 177 IAQQGSVQLRQFGMEMLTINLVGRLTFRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEI 236

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+RT+G+  +  L+ PR  A+++ +PLL   A+  A+IG   +     DIP   F  R 
Sbjct: 237 DAMRTIGVSPMEALVMPRTLAVVVMMPLLGFYASIVAVIGGGFLCAVALDIPPITFVQRL 296

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                + +++ GLIKAP     I +    +G  V  ++  +G + T  VVQ+I +VI+ID
Sbjct: 297 REVVPITDLWVGLIKAPVFGIIIALSGCYQGMQVKANAEEVGLRTTAAVVQAIFLVIVID 356

Query: 362 SLFAIFYFAIG 372
           + FA+F+  +G
Sbjct: 357 AFFAVFFTWVG 367


>gi|188993114|ref|YP_001905124.1| ABC transporter permease [Xanthomonas campestris pv. campestris
           str. B100]
 gi|167734874|emb|CAP53086.1| ABC transporter permease [Xanthomonas campestris pv. campestris]
          Length = 370

 Score =  297 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 120/364 (32%), Positives = 192/364 (52%), Gaps = 13/364 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R AG+W        A+     + +++      +D   I ++D+ G   ++ F  +   K
Sbjct: 19  VRLAGSWVLATALPQAE-----LLQAVPDGVRRIDARGIGQLDSAGVLQLLRFASRMGLK 73

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
                     +   +L+        +  KP+R +    F      +G+            
Sbjct: 74  EDAIDFRDEHQ---ALVCTIEELNDERPKPKRDY---GFVAALDRLGRTTHGVGQGILEL 127

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG  +   G       +F+  L S +  M  VG+  VP+V+L+S++ GAVIA  G+ 
Sbjct: 128 NSFLGENLVKIGRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFLGST 185

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAIRT+G
Sbjct: 186 ILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIRTLG 245

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD + +L+ PR+ ALI +LPLLT +A  + + G   V     DIP  ++ +R H T  L 
Sbjct: 246 LDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDTIQLR 305

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ A+++
Sbjct: 306 HFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWF 365

Query: 369 FAIG 372
             +G
Sbjct: 366 MKMG 369


>gi|83748501|ref|ZP_00945522.1| ABC transporter permease protein [Ralstonia solanacearum UW551]
 gi|207742154|ref|YP_002258546.1| abc-type transport system involved in resistance to organic
           solvents, permease component protein [Ralstonia
           solanacearum IPO1609]
 gi|83724805|gb|EAP71962.1| ABC transporter permease protein [Ralstonia solanacearum UW551]
 gi|206593542|emb|CAQ60469.1| abc-type transport system involved in resistance to organic
           solvents, permease component protein [Ralstonia
           solanacearum IPO1609]
          Length = 374

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 102/371 (27%), Positives = 183/371 (49%), Gaps = 12/371 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +G +V   +G+W +  ++E A         ++   ++    L+ +  ID  GA+L+    
Sbjct: 15  DGRSVAYLSGDWTTLALAERAGVRSARRQIRAGLDNANAWCLTEVGRIDHFGAQLLW--- 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            +  G    + +    +Q   +I    R      K + +   N    L    G  ++ F 
Sbjct: 72  -RAWGNRWPEHLDARADQ-RRMIDRVARLDPGGWKKRIAPRINPVTVL----GGAMIDFA 125

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +       ++G ++ +   F  + +  +G    +   +Y  G   + +  L+ F+ G V+
Sbjct: 126 DHLRIGVAMVGQLMFDLLRFVRAPH--RGPWREISANIYSTGYKALGITALVGFLIGIVL 183

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           +   A QL  FGA IF ++++ +  +RE+G +L A+++AGRSGSAI A+IG M++ EE+D
Sbjct: 184 SYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELD 243

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R MG+     LI P++ AL I++PLL    +  A+ G  +      DI    F +   
Sbjct: 244 AMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITSLP 303

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               +AN++ G+ K       I +VA   G  +  ++ SLG+  TT VV SI+IVI+ D+
Sbjct: 304 DAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIVILADA 363

Query: 363 LFAIFYFAIGI 373
           +FAI +  +GI
Sbjct: 364 VFAILFKDVGI 374


>gi|306840506|ref|ZP_07473265.1| Sulfate transporter/antisigma-factor [Brucella sp. BO2]
 gi|306843893|ref|ZP_07476488.1| Sulfate transporter/antisigma-factor [Brucella sp. BO1]
 gi|306275648|gb|EFM57372.1| Sulfate transporter/antisigma-factor [Brucella sp. BO1]
 gi|306289521|gb|EFM60739.1| Sulfate transporter/antisigma-factor [Brucella sp. BO2]
          Length = 391

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 157/373 (42%), Positives = 229/373 (61%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G  V   +G+W S  + ++ DD +  I ++    +  +D+S I+ +DT GA LI   
Sbjct: 23  EQDGARVIHLSGHWISQSV-QLVDDKMRGIEQAGGDKATTIDISGISNLDTAGAWLIERL 81

Query: 62  MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++   K   ++L+GV      L   +     + +   + +  FF+ +F N+   +G  +
Sbjct: 82  RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ND     HILG  I   G            + +++ QM  +GV  +P+V+L+S + 
Sbjct: 139 ISMFNDFKMAMHILGATIR--GAQLKYGRGNGIPIAAIVTQMDRMGVGAIPIVVLMSTIV 196

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F 
Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376

Query: 359 IIDSLFAIFYFAI 371
           ++D +FA+FY AI
Sbjct: 377 VVDGMFAMFYAAI 389


>gi|114320361|ref|YP_742044.1| hypothetical protein Mlg_1205 [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226755|gb|ABI56554.1| protein of unknown function DUF140 [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 377

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 103/369 (27%), Positives = 191/369 (51%), Gaps = 10/369 (2%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
             + + +G+W    ++ +A   +  +    ++    +D SA+  +D  GA  +    E+ 
Sbjct: 18  RGLIQCSGDWTRTGLTRLAGQDLRTLPPP-RTGGWTLDASAMGRLDLTGARQLHRLQERL 76

Query: 66  HGKIKLQGV-STHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
             +     +     E +  L++FT R   + +                 +G++ V  +  
Sbjct: 77  RERGDSVRLGEERPEHMDGLLAFTERAVSERR------PPPPPPGPLERLGRQTVIRLGH 130

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +    +G +           +  +     L  ++   GV  +P++ L++F+TG VIA 
Sbjct: 131 FWAFLAFIGEIALEALPRLLRPWTIR--WKQLSAEIQKAGVQALPIIGLLAFLTGLVIAY 188

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L ++GA IF ++L+S+  LRE+  +LTA+++AGR+GS+  A++G+MKI EEIDA+
Sbjct: 189 QGGDTLERYGANIFLVELVSVTMLREMAPMLTAIVVAGRTGSSWAAQLGTMKITEEIDAL 248

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           RT+G+    +LI PR+ AL++ LPLLTI A+   I+G  +V    + +    F +R    
Sbjct: 249 RTLGISPFDMLILPRLMALMVVLPLLTIYADVLGILGGMLVADLMFGVAMHDFINRLPEA 308

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
              ++++ GL+KAP  A  I  +A  +G  V   + S+G+  T  VVQ+I +VI+ D++F
Sbjct: 309 IATSHLWVGLVKAPVFALIIVGIACFQGMRVKGSAESVGRATTITVVQAIFLVIVTDAVF 368

Query: 365 AIFYFAIGI 373
           +I +  +G+
Sbjct: 369 SILFNLVGL 377


>gi|190892035|ref|YP_001978577.1| probable ABC transporter, permease protein [Rhizobium etli CIAT
           652]
 gi|190697314|gb|ACE91399.1| probable ABC transporter, permease protein [Rhizobium etli CIAT
           652]
          Length = 389

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 158/373 (42%), Positives = 230/373 (61%), Gaps = 11/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S+      R +GNW+S  +  +  D    +++  ++ +  VDLS IT+IDT G  L+   
Sbjct: 23  SDGSGQHVRLSGNWRSAYVHLVLRDFEKLLHQ--KTGNLTVDLSEITDIDTAGIWLLCRL 80

Query: 62  M---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
               E     ++ +G + HI+++ ++ S    K             +    +   IGK  
Sbjct: 81  KKEEEAAGRTVRFEGTNPHIDEMLAMFSEEPAKPEPE----PKEKVSLAARILAPIGKMT 136

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
               ++  +  +ILG  +                  S++ Q+ ++GV  VP+++L+SF+ 
Sbjct: 137 YDVWDNLAAAMYILGSAVRGAQMKFGRGS--GVSPASIVNQIDHMGVRAVPIILLMSFLI 194

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ 
Sbjct: 195 GAIIAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMR 254

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA++ MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA++V W Y  I FA F 
Sbjct: 255 EEIDALKVMGLNPIGVLIFPRLVALTIALPLLTVLANFASLAGAAVVAWGYSGITFANFL 314

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +R H   TL+ + +G+IKAPFMA  IGIVA  EG  VG  + SLG+ VT  VV++I +VI
Sbjct: 315 ARLHEAVTLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTASVVKAIFVVI 374

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 375 LMDGLFAMFYAAI 387


>gi|300705335|ref|YP_003746938.1| ABC transporter permease [Ralstonia solanacearum CFBP2957]
 gi|299072999|emb|CBJ44356.1| putative abc-type transport system, permease component abc
           transporter protein (resistance to organic solvents)
           [Ralstonia solanacearum CFBP2957]
          Length = 374

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 102/371 (27%), Positives = 182/371 (49%), Gaps = 12/371 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +G +V   +G+W +  ++E A         ++   ++    L+ +  ID  GA+L+    
Sbjct: 15  DGRSVAYLSGDWTTLALAERAGVRGARRQIRAGLDNANAWCLTEVGRIDHFGAQLLW--- 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            +  G    + +    +Q   +I    R      K   +   N    L    G  ++ F 
Sbjct: 72  -RAWGNRWPEHLDARADQ-RRMIDRVARLDPGGWKKHIAPRINPVTVL----GGAMLDFA 125

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +       ++G ++ +   F  + +  +G    +   +Y  G   + +  L+ F+ G V+
Sbjct: 126 DHLQIGVAMVGQLMFDLLRFVRAPH--RGPWREISANIYSTGYKALGITALVGFLIGIVL 183

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           +   A QL  FGA IF ++++ +  +RE+G +L A+++AGRSGSAI A+IG M++ EE+D
Sbjct: 184 SYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELD 243

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R MG+     LI P++ AL I++PLL    +  A+ G  +      DI    F +   
Sbjct: 244 AMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITSLP 303

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               +AN++ G+ K       I +VA   G  +  ++ SLG+  TT VV SI+IVI+ D+
Sbjct: 304 DAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIVILADA 363

Query: 363 LFAIFYFAIGI 373
           +FAI +  +GI
Sbjct: 364 VFAILFKDVGI 374


>gi|325915744|ref|ZP_08178046.1| hypothetical integral membrane protein [Xanthomonas vesicatoria
           ATCC 35937]
 gi|325538008|gb|EGD09702.1| hypothetical integral membrane protein [Xanthomonas vesicatoria
           ATCC 35937]
          Length = 370

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 118/364 (32%), Positives = 191/364 (52%), Gaps = 13/364 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R +G+W        A+     + +++      +D   I ++D+ G   ++ F  +   K
Sbjct: 19  VRLSGSWVLATALPQAE-----LLQAVPDGVRRIDARGIGQLDSAGVLQLLRFAGRMGLK 73

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
                     +   +L+        +  KP+R +    F      +G+            
Sbjct: 74  EDAIDFRDEHQ---ALVCTIEELNDERPKPKRDY---GFVAALDRLGRTTHGVGQGILEL 127

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG  +           +F+  L S +  M  VG+  VP+V+L+S++ GAVIA  G+ 
Sbjct: 128 NSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFLGST 185

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAIRT+G
Sbjct: 186 ILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIRTLG 245

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD + +L+ PR+ ALI +LPLLT +A  + + G   V     DIP  ++ +R H T  L 
Sbjct: 246 LDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDTIQLR 305

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ A+++
Sbjct: 306 HFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWF 365

Query: 369 FAIG 372
             +G
Sbjct: 366 MKMG 369


>gi|238028752|ref|YP_002912983.1| hypothetical protein bglu_1g32160 [Burkholderia glumae BGR1]
 gi|237877946|gb|ACR30279.1| Hypothetical protein bglu_1g32160 [Burkholderia glumae BGR1]
          Length = 390

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 105/386 (27%), Positives = 179/386 (46%), Gaps = 27/386 (6%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI----------------VDLSAI 47
           +G  + R +G W +  ++     VV    K  +   A                  DLSAI
Sbjct: 15  DGGKIVRLSGQWTALALARDRGVVVRRAEKLARGQVARGRRSREPAAADGPARRWDLSAI 74

Query: 48  TEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF 107
             +D +G + +     +  G     GV     Q   +     R     + P+    ++  
Sbjct: 75  ERLDHVGGQALW----RVWGHRLPDGVVLTDNQRI-VFERIERLDEAREAPEPVVRHDPV 129

Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167
             L    G  + +F         + G VI + G               +   +Y  G   
Sbjct: 130 TRL----GLAMFQFGEHLFGGVAMFGRVILDLGAIARRPKTMP--WTEISANVYNAGAKA 183

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P+  L++F+ G V++   A QL QFGA  + ++++ +  +RE+G +L+A+++AGRSGSA
Sbjct: 184 LPITALVAFLIGIVLSYLSAQQLQQFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSA 243

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A+IG M++ EE+DA+R MG+     ++ PR+ AL +++PLL +  N  A+ G ++   
Sbjct: 244 ITAQIGVMRVTEELDAMRVMGIPHGLRIVLPRVLALGVAMPLLVMWTNIVALSGGALAAK 303

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
               I F  F         +AN++ GL K       I +V    GF +  +S SLG+  T
Sbjct: 304 FALGIDFNFFMRSLPGVVPIANLWIGLGKGVVFGMLIALVGCHFGFRIKANSQSLGEGTT 363

Query: 348 TCVVQSISIVIIIDSLFAIFYFAIGI 373
           T VV SI++VI+ D++FAI +  +G+
Sbjct: 364 TSVVSSITVVILADAVFAILFQNVGL 389


>gi|148545417|ref|YP_001265519.1| hypothetical protein Pput_0160 [Pseudomonas putida F1]
 gi|148509475|gb|ABQ76335.1| protein of unknown function DUF140 [Pseudomonas putida F1]
          Length = 377

 Score =  295 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 120/365 (32%), Positives = 193/365 (52%), Gaps = 9/365 (2%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R  G+W     + +  +      ++  + + I DLS +  +DT GA L+   +      
Sbjct: 20  LRITGDWTLAHYANLKRESERL--RTQCAANTIADLSQLGRLDTAGASLLAELLGSERLS 77

Query: 69  IKLQGVSTHIEQLF-SLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
                +    + L  ++        I  ++P+R    N    L   IG  +     DS  
Sbjct: 78  RCTHALPEASQALLKNVYCSVQDYCIPVKEPER----NVLLLLLERIGCAVGTLWQDSMQ 133

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +G+++          ++++     ++  +   G+   P+V L++F+ GAV+A  GA
Sbjct: 134 LLGFVGVILETLLRRAFQPHRWR--FTPVVAHIEQTGLDAAPIVALLTFLVGAVVAFLGA 191

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L+ FGA IF++DL++   LRE  VLLTA+++AGR+ SA  A+IGSMK NEEIDAIRT+
Sbjct: 192 TVLADFGATIFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRTL 251

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GL+ + +L+ PR+ AL+ISLPLLT +A    I+G ++V     DI  A+F S   S   +
Sbjct: 252 GLNPMELLVVPRVLALLISLPLLTFVAMICGIVGGAVVCALTLDISPAMFLSLLQSDIGV 311

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   GL KAPF A  I  +   EGF V   + S+G   T+ VVQSI +VI++D++ A+F
Sbjct: 312 QHFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVIVLDAVAALF 371

Query: 368 YFAIG 372
           +  +G
Sbjct: 372 FMEMG 376


>gi|206575650|ref|YP_002235755.1| putative ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|206570494|gb|ACI12140.1| putative ABC transporter, permease protein [Klebsiella pneumoniae
           342]
          Length = 382

 Score =  295 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 116/362 (32%), Positives = 197/362 (54%), Gaps = 6/362 (1%)

Query: 12  AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKL 71
           +G+W     + +   V     + +   +AI DLS +  +DT GA L++  M +    ++L
Sbjct: 25  SGDWVLAHYAYLEPAVSALQPQLLS--NAIFDLSQLGTLDTAGATLLVKLMGEKKV-LEL 81

Query: 72  QGVSTHIEQLFSLISFTHRKKIKNQ-KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAH 130
           + ++  +     ++  T R  I+N   P           L  +IGK +  F  +  +   
Sbjct: 82  ERIAPTLPIERRVLLQTVRSAIQNYVTPPAQHQPGIVTELLANIGKSVESFWQNLVALIG 141

Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190
            +GL +            ++  + SL+  +  +G++ VP++ L++F+ GAVIA  G+  L
Sbjct: 142 FIGLTMEALFATLLRPAHWR--VTSLVANLQQIGLNAVPIIALLTFMVGAVIAFLGSTVL 199

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
           S FGA IF++ L++   LRE  VLL A+++AGR+ SA  A+IG MK NEEIDAI+TMGL+
Sbjct: 200 STFGASIFTVQLVAFSFLREFAVLLAAILMAGRTASAFTAQIGLMKANEEIDAIQTMGLN 259

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
            V +L+ PR+ AL+++LP++T +     I+G  +V     DI   +F +   +     + 
Sbjct: 260 PVELLVLPRVLALLVALPMMTFIGMICGILGGIVVCALTLDISPTMFLTIMQNNVGFEHF 319

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           + G+IKAP  A  I I+   EGF V   + S+G+  T  VV SI +VI++D++ A+F+  
Sbjct: 320 WVGMIKAPVFAFLIAIIGCLEGFKVSGSAESVGEHTTASVVHSIFVVILLDAVAALFFME 379

Query: 371 IG 372
           +G
Sbjct: 380 MG 381


>gi|313682999|ref|YP_004060737.1| hypothetical protein Sulku_1877 [Sulfuricurvum kujiense DSM 16994]
 gi|313155859|gb|ADR34537.1| protein of unknown function DUF140 [Sulfuricurvum kujiense DSM
           16994]
          Length = 373

 Score =  295 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 109/364 (29%), Positives = 177/364 (48%), Gaps = 18/364 (4%)

Query: 11  FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFMEKYHG 67
            +G+W    +S+ A ++   I  S+       D+S ITEID+ G  L        E+   
Sbjct: 23  CSGSWTIEHLSDAARELEALIPLSL----VTWDMSGITEIDSSGIALWQLTNRTFEERGH 78

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
             +       + +LF L+           KP R     +  +  Y +GK+  +      +
Sbjct: 79  TCETVNEREDLSRLFRLL---------YSKPFRDVPIPAVPSSLYRLGKETYEIFRGIGT 129

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               LG                +    S+   +   G   +P++ L +F+ G V+A Q  
Sbjct: 130 FLAFLGEAFILFFYTLRHPRLIR--YRSIGVHILETGARALPIIALSAFLIGVVVAYQSV 187

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL +FGA+IF +D++ I   RE+  L+TA+++AGRSGSA  A+IG+MK+ +EIDA+RTM
Sbjct: 188 VQLQKFGADIFIVDMIGISLTRELAPLITAIVVAGRSGSAFTAQIGTMKMTQEIDAMRTM 247

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G D    L+ PR+ AL+I +PLL   A+   I G  ++   +  + F+ F  R      L
Sbjct: 248 GFDPFTFLVWPRVIALMIIMPLLIFFADMVGIFGGMVIAQVHSHLSFSEFIHRLQGALAL 307

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   GLIK PF A  I  V+   GF V +++ S+G+  T  VV +I +VI  D++F++ 
Sbjct: 308 KHYLIGLIKGPFFAFLIAFVSTYRGFQVSMNTESIGQYTTKSVVNAIFLVIACDAIFSVL 367

Query: 368 YFAI 371
              +
Sbjct: 368 LTEL 371


>gi|261855956|ref|YP_003263239.1| hypothetical protein Hneap_1358 [Halothiobacillus neapolitanus c2]
 gi|261836425|gb|ACX96192.1| protein of unknown function DUF140 [Halothiobacillus neapolitanus
           c2]
          Length = 413

 Score =  295 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 104/374 (27%), Positives = 195/374 (52%), Gaps = 14/374 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDL-SAITEIDTIGAELIMYF 61
           +  +TV   +G W    +  +     ++   + ++D   + L S ++  D  GA ++  +
Sbjct: 49  DRQVTVLVLSGTWTIHSLQHVPTLDTLSGAPTKKADKPCIVLRSEMSAFDGAGALVLARW 108

Query: 62  MEKYHG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
           +  +     ++ L         L  L+    R       P +         +   IG+  
Sbjct: 109 IRTWRADGFEVDLGEFPPRETSLLQLLD--DRLVDTEPAPVKKPK------MIARIGQFT 160

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           V+  +++ S    LG ++        + ++ +    ++I ++   GV  + +V L+SF+ 
Sbjct: 161 VEQWHETRSFLAFLGELVWRGAPLLLTFWRIR--WRAVISEIDAAGVRALGIVGLLSFMI 218

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G V+A QG   L  +GA +  +DL+ I+ LRE+G LL A+++AGR+GS+  A++G+M+I 
Sbjct: 219 GMVMAYQGGATLQNYGANVLIVDLVGIITLREMGPLLAAIIVAGRTGSSYTAQLGTMRIT 278

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+R +G+    ILI P++ ALII+LPLL+I ++   ++G ++V    + + F+V+F
Sbjct: 279 EEIDALRAIGVPPFEILIFPKVLALIITLPLLSIFSDLMGLLGGAVVANYGFGVSFSVYF 338

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
            R     +L  ++ GL+K P  A  I ++   +G  V   +  +G   T  VVQ+I +VI
Sbjct: 339 DRMPEAVSLTTLWLGLLKTPVFAIVIALIGCMQGLRVRGSAAEVGHATTVSVVQAIFMVI 398

Query: 359 IIDSLFAIFYFAIG 372
           +ID+LF++ Y  +G
Sbjct: 399 VIDALFSVLYNVMG 412


>gi|78067712|ref|YP_370481.1| ABC transporter, inner membrane subunit [Burkholderia sp. 383]
 gi|77968457|gb|ABB09837.1| ABC transporter, inner membrane subunit [Burkholderia sp. 383]
          Length = 374

 Score =  295 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 103/366 (28%), Positives = 176/366 (48%), Gaps = 11/366 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             R  G W +  ++     V   +        +  DLS I  +D +G + +     +  G
Sbjct: 19  TVRLYGQWTALALARNRGAVARRVASIASGRVSEWDLSGIERLDHVGGQALW----RVWG 74

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
           +    GV+  + Q  ++     R   + + P+R   ++    L    G+ I  F      
Sbjct: 75  RKLPPGVALSVTQ-RTIFERIERLDSEREAPERVVRFDPVTRL----GQAIFGFGEHLQG 129

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              + GLVI +                     +Y  G   +P+  L++F+ G V++   A
Sbjct: 130 GIAMFGLVILDALSVLRRPKTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 187

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M
Sbjct: 188 QQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     LI PR+ AL I++PLL +  N  A+ G ++       I    F         +
Sbjct: 248 GIPHGLRLILPRVLALGIAMPLLVMWTNIVALTGGALAAKLVLGIDVNYFVRSLPGVVPI 307

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN++ G+ K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI 
Sbjct: 308 ANLYIGVGKGIVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIL 367

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 368 FQNVGL 373


>gi|103485974|ref|YP_615535.1| hypothetical protein Sala_0481 [Sphingopyxis alaskensis RB2256]
 gi|98976051|gb|ABF52202.1| protein of unknown function DUF140 [Sphingopyxis alaskensis RB2256]
          Length = 368

 Score =  295 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 114/371 (30%), Positives = 195/371 (52%), Gaps = 16/371 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
             +G+ V RF G      + ++   +            A +DLSAI  IDT+GA ++   
Sbjct: 12  GADGVEV-RFTGRLTLARLGDLPARLDAL------GPIATLDLSAIDRIDTVGAWIVTRT 64

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
              +    ++ G S   ++L   ++       K++         ++  +   IG   V  
Sbjct: 65  AADHDA--RITGASADAQRLLDALASD-----KSEYRVHRDRRPAWVRMLEQIGTASVAV 117

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
            N+        G +I        +  + +    +++ +   VGV  +P++ L+SF+ G V
Sbjct: 118 WNELLGIVGFFGAMIVAIFNQIRARRRLR--WNAIVTRFQTVGVDALPIIGLMSFLIGIV 175

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IAQQGA QL QFG E+F+I+L+    +RE+G+L+TA+M+AGRSGSA  A+IG+MK+ EE+
Sbjct: 176 IAQQGAVQLEQFGLEVFTINLVGRASIRELGLLMTAIMVAGRSGSAFAAQIGTMKLTEEV 235

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+RT+G+  +  ++ PR+ A  I++PLL   A+  AI G  +  W   DIP   +  R 
Sbjct: 236 DAMRTIGVSPMEAIVLPRVAASTITMPLLGFYASLCAIAGGGLFCWVGLDIPPLTYIQRL 295

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                + + +  LIKAP     IG+    EG  V  ++  +G++ T+ VV +I +VI++D
Sbjct: 296 REIIPMTDFWIMLIKAPVFGILIGVTGCYEGMQVRQNAEEVGQRTTSAVVAAIFLVIVLD 355

Query: 362 SLFAIFYFAIG 372
           + FA+F+ ++G
Sbjct: 356 AFFAVFFSSLG 366


>gi|327190640|gb|EGE57728.1| putative ABC transporter, permease protein [Rhizobium etli
           CNPAF512]
          Length = 383

 Score =  295 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 158/373 (42%), Positives = 230/373 (61%), Gaps = 11/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S+      R +GNW+S  +  +  D    +++  ++ +  VDLS IT+IDT G  L+   
Sbjct: 17  SDGSGQHVRLSGNWRSAYVHLVLRDFEKLLHQ--KAGNLTVDLSEITDIDTAGIWLLCRL 74

Query: 62  M---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
               E     ++ +G + HI+++ ++ S    K             +    +   IGK  
Sbjct: 75  KKEEEAAGRTVRFEGTNPHIDEMLAMFSEEPAKPEPE----PKEKVSLAARILAPIGKMT 130

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
               ++  +  +ILG  +                  S++ Q+ ++GV  VP+++L+SF+ 
Sbjct: 131 YDVWDNLAAAMYILGSAVRGAQMKFGRGS--GVSPASIVNQIDHMGVRAVPIILLMSFLI 188

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ 
Sbjct: 189 GAIIAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMR 248

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA++ MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA++V W Y  I FA F 
Sbjct: 249 EEIDALKVMGLNPIGVLIFPRLVALTIALPLLTVLANFASLAGAAVVAWGYSGITFANFL 308

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +R H   TL+ + +G+IKAPFMA  IGIVA  EG  VG  + SLG+ VT  VV++I +VI
Sbjct: 309 ARLHEAVTLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTASVVKAIFVVI 368

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 369 LMDGLFAMFYAAI 381


>gi|21230110|ref|NP_636027.1| ABC transporter permease [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66769899|ref|YP_244661.1| ABC transporter permease [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21111638|gb|AAM39951.1| ABC transporter permease [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66575231|gb|AAY50641.1| ABC transporter permease [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 370

 Score =  295 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 119/364 (32%), Positives = 191/364 (52%), Gaps = 13/364 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R AG+W        A+     + +++      +D   I ++D+ G   ++ F  +   K
Sbjct: 19  VRLAGSWVLATALPQAE-----LLQAVPDGVRRIDARGIGQLDSAGVLQLLRFASRMGLK 73

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
                     +   +L+        +  KP+R +    F      +G+            
Sbjct: 74  EDAIDFRDEHQ---ALVCTIEELNDERPKPKRDY---GFVAALDRLGRTTHGVGQGILEL 127

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG  +           +F+  L S +  M  VG+  VP+V+L+S++ GAVIA  G+ 
Sbjct: 128 NSFLGENLVKIARLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFLGST 185

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAIRT+G
Sbjct: 186 ILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIRTLG 245

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD + +L+ PR+ ALI +LPLLT +A  + + G   V     DIP  ++ +R H T  L 
Sbjct: 246 LDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDTIQLR 305

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ A+++
Sbjct: 306 HFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWF 365

Query: 369 FAIG 372
             +G
Sbjct: 366 MKMG 369


>gi|313496513|gb|ADR57879.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
          Length = 374

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 120/365 (32%), Positives = 193/365 (52%), Gaps = 9/365 (2%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R  G+W     + +  +    +     +D+   DLS +  +DT GA L+   +      
Sbjct: 17  LRITGDWTLAHYASLKRESER-LRSQCPADTVA-DLSQLGRLDTAGASLLAELLGSERLS 74

Query: 69  IKLQGVSTHIEQLF-SLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
                +    + L  ++        I  ++P+R    N    L   IG+ +     DS  
Sbjct: 75  RCTHALPEASQALLKNVYCSVQDYCIPVKEPER----NVLLLLLERIGRAVGTLWQDSMQ 130

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +G+++          ++++     ++  +   G+   P+V L++F+ GAV+A  GA
Sbjct: 131 LLGFVGVILETLLRRAFQPHRWR--FTPVVAHIEQTGLDAAPIVALLTFLVGAVVAFLGA 188

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L+ FGA IF++DL++   LRE  VLLTA+++AGR+ SA  A+IGSMK NEEIDAIRT+
Sbjct: 189 TVLADFGATIFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRTL 248

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GL+ + +L+ PR+ AL+ISLPLLT +A    I+G ++V     DI  A+F S   S   +
Sbjct: 249 GLNPMELLVVPRVLALLISLPLLTFVAMICGIVGGAVVCALTLDISPAMFLSLLQSDIGV 308

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   GL KAPF A  I  +   EGF V   + S+G   T+ VVQSI +VI++D++ A+F
Sbjct: 309 QHFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVIVLDAVAALF 368

Query: 368 YFAIG 372
           +  +G
Sbjct: 369 FMEMG 373


>gi|182681137|ref|YP_001829297.1| hypothetical protein XfasM23_0579 [Xylella fastidiosa M23]
 gi|182631247|gb|ACB92023.1| protein of unknown function DUF140 [Xylella fastidiosa M23]
 gi|307579585|gb|ADN63554.1| ABC transporter permease [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 396

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 123/364 (33%), Positives = 198/364 (54%), Gaps = 13/364 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
              +G+W    +   A +++ + + SIQ     ++   I ++D+ GA  ++ F  +   K
Sbjct: 45  IHLSGSWVLANLLT-ASELLQSYSNSIQH----INARNIDQLDSAGALQLLRFTTRTGLK 99

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
            +          L S I        ++ KP+R +    F      +G  +VK   +    
Sbjct: 100 NEAIEFREEHRPLISTIEILDD---EHPKPERDY---GFLAALERLGIAVVKTRRNIIDV 153

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG  +    +      +F+  + S +  M  VG+  VP+V+++S++ GAVIA  G+ 
Sbjct: 154 CSFLGENLVKIAQLAREPRRFR--ITSTVHHMEQVGLDAVPLVVVLSYLVGAVIAFLGST 211

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L  FGAEIF ++L++I  LRE  VLLTA+++AGR+ SA  A+IG+MK  EEIDAI+T+G
Sbjct: 212 ILRNFGAEIFVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEIDAIQTLG 271

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD + +L+ PR+ AL++ LPLLT +A  + + G   V      IP  ++ SR H T  L 
Sbjct: 272 LDPIDLLVIPRLIALLVMLPLLTFIAMIAGLAGGITVGAFDLGIPPQMYLSRMHETMQLR 331

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   G+ KAP  A  IG++   EG  V   + S+GK  T+ VVQ+IS+VIIID+L A+++
Sbjct: 332 HFIIGMSKAPLFALIIGLIGCLEGLKVTGTAQSVGKHTTSSVVQTISLVIIIDALAALWF 391

Query: 369 FAIG 372
             +G
Sbjct: 392 MRMG 395


>gi|206559095|ref|YP_002229855.1| hypothetical protein BCAL0697 [Burkholderia cenocepacia J2315]
 gi|198035132|emb|CAR51006.1| putative membrane protein [Burkholderia cenocepacia J2315]
          Length = 374

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 103/366 (28%), Positives = 174/366 (47%), Gaps = 11/366 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             R  G W +  ++     V   +        +  DLS I  +D +G + +     +  G
Sbjct: 19  TVRLTGQWTALALARNRGAVARRVASIATGRVSEWDLSGIERLDHVGGQALW----RVWG 74

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
           +    GV+    Q  ++     R   + + P+R    +    L    G+ I  F      
Sbjct: 75  RKLPAGVALSATQ-RTIFERIERLDSEREAPERVVRVDPVTRL----GQAIFSFGEHLQG 129

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              + GLVI +                     +Y  G   +P+  L++F+ G V++   A
Sbjct: 130 GIAMFGLVILDALSVLRRPQTMP--WRETSANIYSAGAQALPITALVAFLIGIVLSYLSA 187

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M
Sbjct: 188 QQLQTFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     L+ PR+ AL +++PLL +  N  A+ G +I       I    F         +
Sbjct: 248 GIPHGLRLVLPRVLALGVAMPLLVMWTNIIALTGGAIAAKFVLGIDVNYFVRSLPGVVPI 307

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN++ GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI 
Sbjct: 308 ANLYIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIL 367

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 368 FQNVGL 373


>gi|254710104|ref|ZP_05171915.1| Sulfate transporter/antisigma-factor [Brucella pinnipedialis B2/94]
 gi|261317653|ref|ZP_05956850.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261296876|gb|EEY00373.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
          Length = 391

 Score =  295 bits (756), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 159/373 (42%), Positives = 230/373 (61%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI   
Sbjct: 23  EQDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81

Query: 62  MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++   K   ++L+GV      L   +     + +   + +  FF+ +F N+   +G  +
Sbjct: 82  RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ND     HILG  I   G            + +++ QM  +GV  +P+V+L+S + 
Sbjct: 139 ISMFNDFKMAMHILGATIR--GAQLKYGRGNGIPIAAIVTQMDRMGVGAIPIVVLMSTIV 196

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F 
Sbjct: 257 EETDALTVIGLNAVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 377 VVDGLFAMFYAAI 389


>gi|317181149|dbj|BAJ58935.1| hypothetical protein HPF32_1353 [Helicobacter pylori F32]
          Length = 377

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 105/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  VD S   +ID +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            +    I+L  VS +      ++     K+   +  + S  Y   + +   +GK IV+  
Sbjct: 72  RERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKESKKY---ELMITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +P+ IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPISILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 VFSIIFSKLNI 377


>gi|239813318|ref|YP_002942228.1| hypothetical protein Vapar_0299 [Variovorax paradoxus S110]
 gi|239799895|gb|ACS16962.1| protein of unknown function DUF140 [Variovorax paradoxus S110]
          Length = 388

 Score =  295 bits (755), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 97/374 (25%), Positives = 187/374 (50%), Gaps = 15/374 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEI--ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
            ++G +    +G W +  +S       +   +  +  +D    DL  I ++D IGA+L+ 
Sbjct: 24  EQDGRSWTVASGRWTTLAMSSRSAWQALSKDLAGAPPADGRAWDLRPIEQLDHIGAQLLW 83

Query: 60  -YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++  ++   ++L   S   + +   ++       +   P  +     F     H G + 
Sbjct: 84  DHWRHRWPATLEL---SPQHKAVLDQVAQFTVGTPEEPPPTLAERLRHF----SHTGARG 136

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           ++   D      ++G +  +      + +  +G        +Y  G + + +  L+  + 
Sbjct: 137 LEVARD---FVGLIGQLALDACTLLRAPH--RGPWRDFSGHLYQFGATALHITALVGLLI 191

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G V+A   + QL Q+GAE F ++++ +  +RE+G +L AV+IAGRSGSAI A+IG M++ 
Sbjct: 192 GVVLAYLISQQLRQYGAEAFVVNILGLSLIRELGPVLAAVLIAGRSGSAITAQIGVMRVT 251

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE+DA+R MG+     L+ PR+ AL I++PL+++  + +A++G  +      DI  A F 
Sbjct: 252 EELDAMRVMGIPHGFRLVMPRVMALAIAMPLISLWTSMAALLGGMLAADAALDISPAYFL 311

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           S       ++N++  L K+      I ++    G  V  ++ SLG+  T+ VV SI+ VI
Sbjct: 312 SALPRAVPISNLWLALAKSAVFGILIALIGCYFGMKVKPNTESLGRGTTSSVVTSITAVI 371

Query: 359 IIDSLFAIFYFAIG 372
           ++D+LFA+ +  +G
Sbjct: 372 LVDALFAVLFKGVG 385


>gi|146277759|ref|YP_001167918.1| hypothetical protein Rsph17025_1720 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145556000|gb|ABP70613.1| protein of unknown function DUF140 [Rhodobacter sphaeroides ATCC
           17025]
          Length = 366

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 109/366 (29%), Positives = 197/366 (53%), Gaps = 15/366 (4%)

Query: 11  FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG--- 67
            +G      ++    ++  A  +        +D+ A+  +DT GA  I+   ++      
Sbjct: 13  ISGRLTIETLARTRHNLASAEREG------RLDMGAVEALDTAGAWAILSAQKRAEAGGR 66

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
             ++  +S     L + ++      +   +P+R        +    +G+++   +  S  
Sbjct: 67  PFEIVNLSEAHRHLLATVAD----AMPEPEPRRRTIPGRPGDGLAQLGQEVAGGLRGSLD 122

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
                G V+++ G       + +  L  L+  M   G + VP+V L+ F+ G V+A QG+
Sbjct: 123 SMAFFGQVVAHLGGLLIHPRRLR--LTPLVHHMQEAGWNAVPIVTLMGFLIGIVLAFQGS 180

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGAE++ +DL++I  LRE+G+LLTA+++AGRSGSA  A IGSMK+ EEIDA+R +
Sbjct: 181 TQLKAFGAEVYVVDLVAISILRELGILLTAIIVAGRSGSAFTAAIGSMKMREEIDAMRVL 240

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GLD +  L+ PR+ AL+I LP+L  +A+ + ++G +++ W    I   +F ++  +   +
Sbjct: 241 GLDPIDRLVLPRLIALVILLPVLGFIASMAGLVGGALMAWIDLGITPGMFRTQLLADTDV 300

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   GL+KAPF A  I ++   +G  V  ++ SLG   +  VVQ+I +VI++D+LF++F
Sbjct: 301 NHAIIGLVKAPFFAVIIAVIGCHQGMQVSGNAESLGSHTSRSVVQAIFLVIVVDALFSVF 360

Query: 368 YFAIGI 373
           +   G+
Sbjct: 361 FAVWGL 366


>gi|300692713|ref|YP_003753708.1| abc-type transport system, permease abc transporter protein
           (resistance to organic solvents) [Ralstonia solanacearum
           PSI07]
 gi|299079773|emb|CBJ52450.1| putative abc-type transport system, permease component abc
           transporter protein (resistance to organic solvents)
           [Ralstonia solanacearum PSI07]
          Length = 374

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 102/371 (27%), Positives = 182/371 (49%), Gaps = 12/371 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +G +V   +G+W +  ++E A         ++  +++    L+ +  ID  GA+L+    
Sbjct: 15  DGRSVAYLSGDWTTLALAERAGVRSARRQIRAGLNNANAWCLTEVGRIDHFGAQLLW--- 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            +  G    + +    +Q   +I    R      K + +   N    L    G  +  F 
Sbjct: 72  -RAWGNRWPERLDARPDQ-RRMIDRVARLDPGGWKKRIAPRINPVMVL----GGAMFDFA 125

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                   ++G ++ +   F  + +  +G    +   +Y  G   + +  L+ F+ G V+
Sbjct: 126 GHLQIGVAMVGQLMFDLLRFVRAPH--RGPWREISANIYSTGYKALGITALVGFLIGIVL 183

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           +   A QL  FGA IF ++++ +  +RE+G +L A+++AGRSGSAI A+IG M++ EE+D
Sbjct: 184 SYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELD 243

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R MG+     LI P++ AL I++PLL    +  A+ G  +      DI    F +   
Sbjct: 244 AMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITSLP 303

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               +AN++ G+ K       I +VA   G  +  ++ SLG+  TT VV SI+IVI+ D+
Sbjct: 304 DAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIVILADA 363

Query: 363 LFAIFYFAIGI 373
           +FAI +  +GI
Sbjct: 364 VFAILFKDVGI 374


>gi|237808113|ref|YP_002892553.1| hypothetical protein Tola_1352 [Tolumonas auensis DSM 9187]
 gi|237500374|gb|ACQ92967.1| protein of unknown function DUF140 [Tolumonas auensis DSM 9187]
          Length = 381

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 110/370 (29%), Positives = 198/370 (53%), Gaps = 4/370 (1%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            E+G  + R +G+W       +   +     + I     + D   +  +DT GA L++  
Sbjct: 14  QESGHVLLRISGDWTLTHYVMLKRQITSVQEQMIADTPILWD--DLGSLDTAGAALLVEL 71

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
           + +    +     S    +  +L+        ++   ++    ++   +  HIG+ ++  
Sbjct: 72  LGQVRLSLLTTQDSGLSAERLALLHSVAAALKESTNIEKQPKESAISEMLAHIGQVVIHL 131

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                +    +GL I           +++  + SL   +   G++ +P++ L++F+ GAV
Sbjct: 132 GQQQIALLGFIGLTIETLVRSLIHPRRWR--ITSLAAHIEQTGLNAIPIIALLTFLVGAV 189

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A  G   LS FGA I+++DL++   LRE GVLLTA+++AGR+ SA  A+IGSMK NEEI
Sbjct: 190 VAFLGTTVLSDFGASIYTVDLVAFAFLREFGVLLTAILMAGRTASAFTAQIGSMKANEEI 249

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DAIR +GL+ + +L+ PR+ A++ISLP+LT +A    +IG ++V +   DI   +F +  
Sbjct: 250 DAIRALGLNPIELLVLPRVLAMLISLPILTFIAMACGMIGGAVVCFLELDITPRLFLTIL 309

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                +++ F G+ KAP  A  + ++   EGF VG  + S+G+   + VVQSI +VI++D
Sbjct: 310 QRDIDISHFFVGIGKAPLFAFIVAVIGCLEGFKVGGSAQSVGEHTISSVVQSIFMVILLD 369

Query: 362 SLFAIFYFAI 371
           +L A+F+  +
Sbjct: 370 ALAALFFMEM 379


>gi|28198464|ref|NP_778778.1| ABC transporter permease [Xylella fastidiosa Temecula1]
 gi|28056548|gb|AAO28427.1| ABC transporter permease [Xylella fastidiosa Temecula1]
          Length = 372

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 123/364 (33%), Positives = 198/364 (54%), Gaps = 13/364 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
              +G+W    +   A +++ + + SIQ     ++   I ++D+ GA  ++ F  +   K
Sbjct: 21  IHLSGSWVLANLLT-ASELLQSYSNSIQH----INARNIDQLDSAGALQLLRFTTRTGLK 75

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
            +          L S I        ++ KP+R +    F      +G  +VK   +    
Sbjct: 76  NEAIEFREEHRPLISTIEILDD---EHPKPERDY---GFLAALERLGIAVVKTRRNIIDV 129

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG  +    +      +F+  + S +  M  VG+  VP+V+++S++ GAVIA  G+ 
Sbjct: 130 CSFLGENLVKIAQLAREPRRFR--ITSTVHHMEQVGLDAVPLVVVLSYLVGAVIAFLGST 187

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L  FGAEIF ++L++I  LRE  VLLTA+++AGR+ SA  A+IG+MK  EEIDAI+T+G
Sbjct: 188 ILRNFGAEIFVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEIDAIQTLG 247

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD + +L+ PR+ AL++ LPLLT +A  + + G   V      IP  ++ SR H T  L 
Sbjct: 248 LDPIDLLVIPRLIALLVMLPLLTFIAMIAGLAGGITVGAFDLGIPPQMYLSRMHETMQLR 307

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   G+ KAP  A  IG++   EG  V   + S+GK  T+ VVQ+IS+VIIID+L A+++
Sbjct: 308 HFIIGMSKAPLFALIIGLIGCLEGLKVTGTAQSVGKHTTSSVVQTISLVIIIDALAALWF 367

Query: 369 FAIG 372
             +G
Sbjct: 368 MRMG 371


>gi|71274907|ref|ZP_00651195.1| Protein of unknown function DUF140 [Xylella fastidiosa Dixon]
 gi|71898795|ref|ZP_00680963.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1]
 gi|71901849|ref|ZP_00683912.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1]
 gi|170729829|ref|YP_001775262.1| ABC transporter permease [Xylella fastidiosa M12]
 gi|71164639|gb|EAO14353.1| Protein of unknown function DUF140 [Xylella fastidiosa Dixon]
 gi|71728377|gb|EAO30545.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1]
 gi|71731381|gb|EAO33444.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1]
 gi|167964622|gb|ACA11632.1| ABC transporter permease [Xylella fastidiosa M12]
          Length = 372

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 122/364 (33%), Positives = 197/364 (54%), Gaps = 13/364 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
              +G+W    +   A +++ + + SIQ     ++   I ++D+ GA  ++ F  +   K
Sbjct: 21  IHLSGSWVLANVLT-ASELLQSYSNSIQH----INARNIDQLDSAGALQLLRFATRTGLK 75

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
            +          L S I        ++ KP+R +    F      +G  +VK   +    
Sbjct: 76  NEAIEFREEHRPLISTIEILDD---EHPKPERDY---GFLAALERLGIAVVKTRRNIIDV 129

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG  +    +      +F+  + S +  M  VG+  VP+V+++S++ GAVIA  G+ 
Sbjct: 130 CSFLGENLVKIAQLAREPRRFR--ITSTVHHMEQVGLDAVPLVVVLSYLVGAVIAFLGST 187

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L  FGAEIF ++L++I  LRE  VLLTA+++AGR+ SA  A+IG+MK  EEIDAI+T+G
Sbjct: 188 ILRNFGAEIFVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEIDAIQTLG 247

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD + +L+ PR+ AL++ LPLLT +A  + + G   V      IP  ++ SR H T    
Sbjct: 248 LDPIDLLVIPRLIALLVMLPLLTFIAMIAGLAGGITVGAFDLGIPPQMYLSRMHETMQFR 307

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   G+ KAP  A  IG++   EG  V   + S+GK  T+ VVQ+IS+VIIID+L A+++
Sbjct: 308 HFIIGMSKAPLFALIIGLIGCLEGLKVTGTAQSVGKHTTSSVVQTISLVIIIDALAALWF 367

Query: 369 FAIG 372
             +G
Sbjct: 368 MRMG 371


>gi|319956950|ref|YP_004168213.1| hypothetical protein Nitsa_1211 [Nitratifractor salsuginis DSM
           16511]
 gi|319419354|gb|ADV46464.1| protein of unknown function DUF140 [Nitratifractor salsuginis DSM
           16511]
          Length = 371

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 109/369 (29%), Positives = 178/369 (48%), Gaps = 16/369 (4%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---ME 63
           T+    G+W   +   I  ++        ++    +D   +   D+ G  L++     M+
Sbjct: 15  TLIECQGDWTLDQARLIEKELRRL--PLPETPRCRIDFGKVQRFDSAGILLLLELRERMK 72

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           K     ++ G+    E++  LI    R   +   P+R       + L + IGK  V+ + 
Sbjct: 73  KAGKACEITGLDEKKEKMLHLIE---RGYGEEPLPKRR------EGLLWRIGKATVEELK 123

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                 H LG +  +          F+  +   +  + + GV+ + ++ L SF+ G VIA
Sbjct: 124 VVRDFFHFLGELSVSFLRLLFKPSNFR--MRETVYHIQHSGVNALFIIGLTSFLVGLVIA 181

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
            +   QL QFGA+I+ +D + I   RE+G ++TA++IAGRS S+  AEIG+MKI EEI A
Sbjct: 182 YESLVQLVQFGADIYVVDGIGIAITRELGPMITAIVIAGRSASSYAAEIGTMKITEEIAA 241

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           ++T+G D    L+ PRI A++I+LPLL   ++   I+G  I      D+ F  F  R   
Sbjct: 242 MQTLGFDPFYFLVIPRIVAMMIALPLLIFFSDVIGILGGMIATKVQVDLSFTFFIERLQE 301

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +   G++K PF A  I       GF V   + S+G + T  VV +I  VI  D+L
Sbjct: 302 VLAAKHYILGIVKGPFFALIIAATGCFHGFRVTGDTESIGIETTASVVHAIFFVIACDAL 361

Query: 364 FAIFYFAIG 372
           FA+ Y  +G
Sbjct: 362 FAVIYTQLG 370


>gi|15837904|ref|NP_298592.1| hypothetical protein XF1303 [Xylella fastidiosa 9a5c]
 gi|9106294|gb|AAF84112.1|AE003963_9 conserved hypothetical protein [Xylella fastidiosa 9a5c]
          Length = 396

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 123/364 (33%), Positives = 196/364 (53%), Gaps = 13/364 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
              +G+W    +   A +++ + + SIQ     ++   I ++D+ GA  ++ F  +   K
Sbjct: 45  IHLSGSWVLANVLT-ASELLQSYSNSIQH----INARNIDQLDSAGALQLLRFATRTGLK 99

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
               G       L S I        +  KP+R +    F      +G  +VK   +    
Sbjct: 100 NDAIGFREEHRPLISTIEILDD---EYPKPERDY---GFLAALERLGIAVVKTRRNIVDV 153

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG  +    +      +F+  + S +  M  VG+  VP+V+++S++ GAVIA  G+ 
Sbjct: 154 CSFLGENLVKIAQLAREPRRFR--ITSTVHHMEQVGLDAVPLVVVLSYLVGAVIAFLGST 211

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L  FGAEIF ++L++I  LRE  VLLTA+++AGR+ SA  A+IG+MK  EEIDAI+T+G
Sbjct: 212 ILRNFGAEIFVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEIDAIQTLG 271

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD + +L+ PR+ AL++ LPLLT +A  + + G   V      IP  ++ SR H T    
Sbjct: 272 LDPIDLLVIPRLIALLVMLPLLTFIAMIAGLAGGITVGAFDLGIPPQMYLSRMHETMQFR 331

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   G+ KAP  A  IG++   EG  V   + S+GK  T+ VVQ+IS+VIIID+L A+++
Sbjct: 332 HFIIGMSKAPLFALIIGLIGCLEGLKVTGTAQSVGKHTTSSVVQTISLVIIIDALAALWF 391

Query: 369 FAIG 372
             +G
Sbjct: 392 MRMG 395


>gi|325923308|ref|ZP_08184981.1| conserved hypothetical integral membrane protein [Xanthomonas
           gardneri ATCC 19865]
 gi|325546235|gb|EGD17416.1| conserved hypothetical integral membrane protein [Xanthomonas
           gardneri ATCC 19865]
          Length = 370

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 121/364 (33%), Positives = 193/364 (53%), Gaps = 13/364 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R AG+W        A +++ A+   I+     +D   I ++D+ G   ++ F  +   K
Sbjct: 19  VRLAGSWVLATALPQA-ELLQAVPDGIRR----IDARGIAQLDSAGVLQLLRFASRMGLK 73

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
                     +   +L+        +  KP+R +    F      +G+            
Sbjct: 74  EDAIDFRDEHQ---ALVCTIEELNDERPKPKRDY---GFVAALDRLGRTTHGVGQGILEL 127

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG  +           +F+  L S +  M  VG+  VP+V+L+S++ GAVIA  G+ 
Sbjct: 128 NSFLGENLVKIARLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFLGST 185

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAIRT+G
Sbjct: 186 ILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIRTLG 245

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD + +L+ PR+ ALI +LPLLT +A  + + G   V     DIP  ++ +R H T  L 
Sbjct: 246 LDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDTIQLR 305

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ A+++
Sbjct: 306 HFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWF 365

Query: 369 FAIG 372
             +G
Sbjct: 366 MKMG 369


>gi|317178170|dbj|BAJ55959.1| hypothetical protein HPF16_1362 [Helicobacter pylori F16]
          Length = 377

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  VD S   +ID +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  +    Y   + +   +GK IV+  
Sbjct: 72  KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKEGKKY---ELMITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +P+ IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPISILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 VFSIIFSKLNI 377


>gi|154243867|ref|YP_001409440.1| hypothetical protein Xaut_5005 [Xanthobacter autotrophicus Py2]
 gi|154162989|gb|ABS70204.1| protein of unknown function DUF140 [Xanthobacter autotrophicus Py2]
          Length = 344

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 131/361 (36%), Positives = 198/361 (54%), Gaps = 19/361 (5%)

Query: 11  FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK 70
            +G W +   +               +    V+LS IT +DT GA L+      +  +  
Sbjct: 1   MSGRWDAVCAAH------------ADAKVVSVNLSGITRMDTFGAILLERLCGAWEQEGS 48

Query: 71  LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAH 130
           +  VS+   +   L+    R   +     R       + +   +G ++V    D     +
Sbjct: 49  VPQVSSLDPRYQRLMQELERSDSRPHPQTRRS-----EGILERLGHEVVNTAKDGLDLLN 103

Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190
            +G V+S  G        F+    S + Q+  VG   VP+++LI+F+ G++IAQQ  F  
Sbjct: 104 FIGAVVSAMGRVAVRPRSFR--FTSTVAQLDRVGFRAVPIILLITFLVGSIIAQQSIFHF 161

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
            +FGA+IF +D++ +L LRE+GVL+ ++MIAGRSGSA  AE+GSM++ EE+DA++ MGLD
Sbjct: 162 RRFGADIFVVDMVGVLVLRELGVLIVSIMIAGRSGSAYTAELGSMRMREEVDALKVMGLD 221

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
            + +L+ PRI ALII LPLLT L + +A+IG  +V W Y  I   VF  R      L   
Sbjct: 222 PIEVLVVPRILALIIGLPLLTFLGSMAALIGGGLVAWFYGGITPNVFIDRLKQAIDLTQF 281

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             G+ KAPFMA AIG+VA  EG  VG  + SLG+  T  VV++I +VI++D LFA+F+ +
Sbjct: 282 EVGMYKAPFMAAAIGLVACLEGLKVGGSAESLGQHTTASVVKAIFLVIVMDGLFAVFFAS 341

Query: 371 I 371
           I
Sbjct: 342 I 342


>gi|153009437|ref|YP_001370652.1| hypothetical protein Oant_2107 [Ochrobactrum anthropi ATCC 49188]
 gi|151561325|gb|ABS14823.1| protein of unknown function DUF140 [Ochrobactrum anthropi ATCC
           49188]
          Length = 391

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 156/373 (41%), Positives = 226/373 (60%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G    R +G W S  +  + DD + ++ K+ +  + I+D+S ++ +DT GA LI   
Sbjct: 23  EQDGARHIRLSGRWVSQSV-NLVDDKMRSLEKTDEHKATIIDVSGVSGLDTAGAWLIERL 81

Query: 62  MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++        +L+GV      L   +     + +   + ++ FF+ SF      +G  +
Sbjct: 82  RQRLVAKSADAQLEGVRQSWLPLMEEVGQAVERTLDIPRQKKPFFFISF---LAALGGGV 138

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   ND     HILG  I   G            + +++ QM  +GV  +P++IL+S + 
Sbjct: 139 ISMGNDFKMAMHILGATIR--GAQLKYGRGSGIPIAAIVTQMDRMGVGAIPIIILMSTIV 196

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  +GL+ V +L+ PR+ AL++ LPLLTI+++ +A+IGA  V W Y +I    F 
Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVVLPLLTIISDLAALIGAGGVAWFYSNISPDAFI 316

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           SR H    L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI
Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 377 VVDGLFAMFYAAI 389


>gi|308062730|gb|ADO04618.1| putative ABC transport system permease protein [Helicobacter pylori
           Cuz20]
          Length = 377

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 107/371 (28%), Positives = 182/371 (49%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  VD S   +ID +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  + S  Y   + +   +GK IVK  
Sbjct: 72  KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKASKRY---ELMITKLGKSIVKTY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 VFSIIFSKLNI 377


>gi|325273982|ref|ZP_08140141.1| hypothetical protein G1E_12667 [Pseudomonas sp. TJI-51]
 gi|324100871|gb|EGB98558.1| hypothetical protein G1E_12667 [Pseudomonas sp. TJI-51]
          Length = 374

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 116/364 (31%), Positives = 190/364 (52%), Gaps = 7/364 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R AG+W     + +  D      ++  +   + DLS +  +DT GA L+   +      
Sbjct: 17  LRIAGDWTLAHYASLKRDSERL--RAQYTPDTVADLSQLGRLDTAGASLLAELLGTERLS 74

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
                +        +L+   ++       P +    N    L   IG  +     DS   
Sbjct: 75  RCTHDLPEASR---ALLKNVYQSVQDYCIPVKEPERNVLLLLLERIGCAVGTLWQDSMQL 131

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G+++          ++++  +  ++  +   G+   P+V L++F+ GAV+A  GA 
Sbjct: 132 LGFIGVILETLLRRALQPHRWR--ITPVVAHIEQTGLDAAPIVALLTFLVGAVVAFLGAT 189

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L+ FGA +F++DL++   LRE  VLLTA+++AGR+ SA  A+IGSMK NEEIDAIRT+G
Sbjct: 190 VLADFGATVFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRTLG 249

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           L+ + +L+ PR+ AL+I+LPLLT +A    I+G ++V      I  A+F S   S   + 
Sbjct: 250 LNPMELLVVPRVLALLITLPLLTFVAMLCGIVGGAVVCALSLGISPAMFLSLLQSDIGVQ 309

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   GL KAPF A  I  +   EGF V   + S+G   T+ VVQSI +VI++D++ A+F+
Sbjct: 310 HFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVIVLDAVAALFF 369

Query: 369 FAIG 372
             +G
Sbjct: 370 MEMG 373


>gi|317182671|dbj|BAJ60455.1| hypothetical protein HPF57_1381 [Helicobacter pylori F57]
          Length = 377

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  VD S   +ID +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  +    Y   + +   +GK IV+  
Sbjct: 72  KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKKY---ELMITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +P+ IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPISILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 VFSIIFSKLNI 377


>gi|299068161|emb|CBJ39380.1| putative abc-type transport system, permease component abc
           transporter protein (resistance to organic solvents)
           [Ralstonia solanacearum CMR15]
          Length = 374

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 98/371 (26%), Positives = 178/371 (47%), Gaps = 12/371 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +G +V   +G+W +  ++E A         ++  + +    L+ +  ID  GA+L+    
Sbjct: 15  DGRSVAYLSGDWTTLALAERAGVRSARRQIRTGLNTANAWCLTEVGRIDHFGAQLLWRAW 74

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                  +L        ++   ++       K +   R        N    +G  ++ F 
Sbjct: 75  GNRWP--ELLDARPDQRRMIDRVARLDPGGWKKRIAPR-------INPVAVLGNAMLDFA 125

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                   ++G ++ +   F  + +  +G    +   +Y  G   + +  L+ F+ G V+
Sbjct: 126 EHLRIGVAMVGQLVFDLLRFVRAPH--RGPWREISANIYSTGYKALGITALVGFLIGIVL 183

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           +   A QL  FGA IF ++++ +  +RE+G +L A+++AGRSGSAI A+IG M++ EE+D
Sbjct: 184 SYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELD 243

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R MG+     LI P++ AL I++PLL    +  A+ G  +      DI    F +   
Sbjct: 244 AMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITSLP 303

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               +AN++ G+ K       I + A   G  +  ++ SLG+  TT VV SI+IVI+ D+
Sbjct: 304 DAVPVANLWLGIGKGVVFGMLIALAACHFGLRIQPNTQSLGEGTTTSVVVSITIVILADA 363

Query: 363 LFAIFYFAIGI 373
           +FAI +  +GI
Sbjct: 364 VFAILFKDVGI 374


>gi|17545032|ref|NP_518434.1| hypothetical protein RSc0313 [Ralstonia solanacearum GMI1000]
 gi|17427322|emb|CAD13841.1| putative abc-type transport system involved in resistance to
           organic solvents, permease component abc transporter
           protein [Ralstonia solanacearum GMI1000]
          Length = 374

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 184/373 (49%), Gaps = 16/373 (4%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVD---LSAITEIDTIGAELIMY 60
           +G +V   +G+W +  ++E A   V +  + I++     +   L+ +  ID  GA+L+  
Sbjct: 15  DGRSVAYLSGDWTTLALAERAG--VRSARRQIRAGLNTANAWCLTEVGRIDHFGAQLLW- 71

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
              +  G    + +    +Q   +I    R      K + +   N    L    G  ++ 
Sbjct: 72  ---RAWGNRWPELLDARPDQ-RRMIDRVARLDPGGWKKRIAPRINPVTVL----GNAMLD 123

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           F         ++G ++ +   F  + +  +G    +   +Y  G   + +  L+ F+ G 
Sbjct: 124 FARHLRIGVAMVGQLMFDLLRFVRAPH--RGPWREISANIYSTGYKALGITALVGFLIGI 181

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V++   A QL  FGA IF ++++ +  +RE+G +L A+++AGRSGSAI A+IG M++ EE
Sbjct: 182 VLSYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEE 241

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +DA+R MG+     LI P++ AL I++PLL    +  A+ G  +      DI    F + 
Sbjct: 242 LDAMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALGGGILAARFQLDISPTYFITS 301

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                 +AN++ G+ K       I + A   G  +  ++ SLG+  TT VV SI+IVI+ 
Sbjct: 302 LPDAVPVANLWLGIGKGVVFGMLIALTACHFGLRIQPNTQSLGEGTTTSVVVSITIVILA 361

Query: 361 DSLFAIFYFAIGI 373
           D++FAI +  +GI
Sbjct: 362 DAVFAILFKDVGI 374


>gi|188580085|ref|YP_001923530.1| hypothetical protein Mpop_0817 [Methylobacterium populi BJ001]
 gi|179343583|gb|ACB78995.1| protein of unknown function DUF140 [Methylobacterium populi BJ001]
          Length = 382

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 136/371 (36%), Positives = 209/371 (56%), Gaps = 14/371 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF-- 61
           +G  +    G W + +     +     I    +    +VDLS +  +DT+GA ++     
Sbjct: 21  DGRVILH--GRWTADQ-GPAVESASARIAAQGRRQPVLVDLSGLARLDTLGAWVLERTRA 77

Query: 62  -MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
            +E   G++   G       L   +       ++  +P      N    L    G+++ +
Sbjct: 78  EIEAAGGRLAYAGARPEHRILLGEMG------LREPEPAPRDARNPVVRLLDGTGRRVAR 131

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
             N+  S    LG V++  G        F+  + +L+ Q+  V + GVP+++LISF+ G 
Sbjct: 132 GGNEILSGIAFLGEVVAAGGRVARRPQTFR--MAALVNQLEQVALRGVPIIVLISFLVGG 189

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           ++AQQG FQL +FGA+ F ++L+ +L LRE+GVLLT++M+AGRSGSA  AEIGSM++ EE
Sbjct: 190 IVAQQGIFQLQRFGAQSFVVNLIGLLILRELGVLLTSIMVAGRSGSAFTAEIGSMRMREE 249

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +DA+R MGLD + ILI PRI AL+I LP+L  L + +A+ G  +    Y  +    F +R
Sbjct: 250 VDALRVMGLDPIEILILPRILALVIGLPILAFLGSLAALAGGGLTAAIYGGMTVDAFLAR 309

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             +  +  +   GLIKAPFMA  IGI+A  EGFAV   + SLG+ VT  VV+SI +VI++
Sbjct: 310 LQAAVSFHHFAVGLIKAPFMALTIGIIATIEGFAVEGSAESLGRHVTASVVKSIFMVIVL 369

Query: 361 DSLFAIFYFAI 371
           D LFA+F+ AI
Sbjct: 370 DGLFAVFFAAI 380


>gi|308185234|ref|YP_003929367.1| putative ABC transport system permease protein [Helicobacter pylori
           SJM180]
 gi|308061154|gb|ADO03050.1| putative ABC transport system permease protein [Helicobacter pylori
           SJM180]
          Length = 377

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 106/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  VD S   +ID +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            +    I+L  VS +      ++     K+   +  + S  Y   + L   +GK +V+  
Sbjct: 72  RERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKASKQY---ELLITKLGKSLVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 IFSILFSKLNI 377


>gi|261840140|gb|ACX99905.1| hypothetical protein HPKB_1368 [Helicobacter pylori 52]
          Length = 377

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  VD S   +ID +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  +    Y   + +   +GK IV+  
Sbjct: 72  KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKKY---ELMITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +P+ IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPISILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 VFSIIFSKLNI 377


>gi|317014880|gb|ADU82316.1| hypothetical protein HPGAM_07715 [Helicobacter pylori Gambia94/24]
          Length = 377

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 103/371 (27%), Positives = 180/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +          VD S   +ID +    +   +
Sbjct: 14  DGANSVLILRGDWDFRTSVFRLDELKKNLLDH--QGPLKVDFSGCQKIDFVFGMFLFDLI 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  +    Y   + +   +GK +V+  
Sbjct: 72  KERSLNIELCNVSENNACALKVVKDWLEKEDDLESKKAGKKY---ELMITKLGKSLVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 IFSILFSKLNI 377


>gi|315585855|gb|ADU40236.1| ABC superfamily ATP binding cassette transporter permease protein
           [Helicobacter pylori 35A]
          Length = 377

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 180/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  VD S   +ID +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            +    I+L  VS +      ++     K+   +  +    Y   + +   +GK IV+  
Sbjct: 72  RERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKVGKKY---ELMITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +P+ IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPISILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 VFSIIFSKLNI 377


>gi|104779408|ref|YP_605906.1| ABC transporter permease [Pseudomonas entomophila L48]
 gi|95108395|emb|CAK13089.1| putative ABC transporter, permease protein [Pseudomonas entomophila
           L48]
          Length = 374

 Score =  292 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 121/372 (32%), Positives = 196/372 (52%), Gaps = 9/372 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           ++   T    AG+W     + +  +       S   D   VDLS +  +DT GA L+   
Sbjct: 10  TQQQPTRLHIAGDWTLAHYASLKRECERL--GSQYGDDTQVDLSQLGRLDTAGASLLAEL 67

Query: 62  MEKYHGKIKLQGVSTHIEQL-FSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
           +    G  +L   +  +     +L+   +        P +         L   IG+ + +
Sbjct: 68  L----GSERLSHCTDDLPDASRALLKNVYCSVQDYCIPVKQPEQPVLLLLLARIGRAVDQ 123

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
              D+      +GL++          ++++  +  ++  +   G+   P+V L++F+ GA
Sbjct: 124 LWQDTRQVLGFIGLILETLLLRLFQPHRWR--VTPVVAHLEQTGLDAAPIVALLTFLVGA 181

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A  GA  L+ FGA IF++DL++   LRE  VLLTA+++AGR+ SA  A+IGSMK NEE
Sbjct: 182 VVAFLGATVLAAFGATIFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEE 241

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDAIRT+GL+ + +L+ PR+ AL+I+LPLLT LA    ++G ++V     DI  A+F S 
Sbjct: 242 IDAIRTLGLNPIELLVVPRVLALLIALPLLTFLAMLCGLVGGAVVCALTLDISPAMFLSL 301

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             S   + +   GL KAPF A  I  +   EGF V   + S+G   T+ VVQSI +VI++
Sbjct: 302 LQSDIGVQHFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVIVL 361

Query: 361 DSLFAIFYFAIG 372
           D++ A+F+  +G
Sbjct: 362 DAVAALFFMEMG 373


>gi|317179642|dbj|BAJ57430.1| hypothetical protein HPF30_1333 [Helicobacter pylori F30]
          Length = 377

 Score =  292 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 106/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  VD S   +ID +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  +    Y   + L   +GK IV+  
Sbjct: 72  KERSLDIELCNVSENNACALKVVKDWLEKEEDLESKKAGKHY---ELLITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 VFSIIFSKLNI 377


>gi|261838741|gb|ACX98507.1| ABC transport system permease [Helicobacter pylori 51]
          Length = 377

 Score =  292 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 105/371 (28%), Positives = 180/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  VD S   +ID +    +   +
Sbjct: 14  DGADSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            +    I+L  VS +      ++     K+   +  +    Y   + +   +GK IV+  
Sbjct: 72  RERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKKY---ELMITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 VFSIIFSKLNI 377


>gi|170734244|ref|YP_001766191.1| hypothetical protein Bcenmc03_2910 [Burkholderia cenocepacia MC0-3]
 gi|169817486|gb|ACA92069.1| protein of unknown function DUF140 [Burkholderia cenocepacia MC0-3]
          Length = 374

 Score =  292 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 102/366 (27%), Positives = 173/366 (47%), Gaps = 11/366 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             R  G W +  ++     V   I        +  DLS I  +D +G + +     +  G
Sbjct: 19  TVRLTGQWTALSLARNRGAVARRIASIAAGRVSEWDLSGIERLDHVGGQALW----RVWG 74

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
           +    GV+    Q  ++     R   + + P+R   ++    L    G  I  F      
Sbjct: 75  RKLPAGVALSATQ-RTIFERIERLDSEREAPERIVRFDPVTRL----GLAIFAFGEHLQG 129

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              + G VI +                     +Y  G   +P+  L++F+ G V++   A
Sbjct: 130 GIAMFGRVILDALSVLRRPKTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 187

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M
Sbjct: 188 QQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     LI PR+ AL +++PLL +  N  A+ G ++       I    F         +
Sbjct: 248 GIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKLVLGIDINYFVRSLPGVVPI 307

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN++ G+ K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI 
Sbjct: 308 ANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIL 367

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 368 FQNVGL 373


>gi|188528238|ref|YP_001910925.1| hypothetical protein HPSH_07510 [Helicobacter pylori Shi470]
 gi|188144478|gb|ACD48895.1| hypothetical protein HPSH_07510 [Helicobacter pylori Shi470]
 gi|308064225|gb|ADO06112.1| putative ABC transport system permease protein [Helicobacter pylori
           Sat464]
          Length = 377

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 105/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  VD S   +ID +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  +    Y   + +   +GK IV+  
Sbjct: 72  KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKVGKRY---ELMITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 VFSIIFSKLNI 377


>gi|153951693|ref|YP_001398923.1| ABC transporter permease [Campylobacter jejuni subsp. doylei
           269.97]
 gi|152939139|gb|ABS43880.1| putative ABC transporter, permease protein [Campylobacter jejuni
           subsp. doylei 269.97]
          Length = 369

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 114/369 (30%), Positives = 187/369 (50%), Gaps = 13/369 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
                G W    I ++     +A+   IQS   I D   + EIDT G    +     ++ 
Sbjct: 11  TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKEIDTAGVRFFLALENDLKD 67

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
            + KI  +G+++  + LF L    +++  K +K  ++F           +GK  ++ +  
Sbjct: 68  KNIKITKEGLNSRFQTLFELCEKNYQRLNKTKKSHKNFS-----EYFIDLGKLSLELLKI 122

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                +  G   ++      +   F+   ++ +  +       +P+VIL + + G V+A 
Sbjct: 123 LRKFINFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q A+QL+QFGA IF +DLM I   RE+  L+ A++IAGRS S+  A+IG MKI +EI A+
Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            TMG      +I PR+ AL++++PL+  +++  +IIG  +V     DI FA F  RF   
Sbjct: 241 NTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREA 300

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             + +IF GL+KAP     IG++A   GF V   + S+G   T  VV +I  VI  D+LF
Sbjct: 301 VDIKHIFIGLVKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF 360

Query: 365 AIFYFAIGI 373
           ++   + GI
Sbjct: 361 SVILTSAGI 369


>gi|226942634|ref|YP_002797707.1| ABC transporter protein [Azotobacter vinelandii DJ]
 gi|226717561|gb|ACO76732.1| ABC transporter protein [Azotobacter vinelandii DJ]
          Length = 382

 Score =  291 bits (746), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 111/364 (30%), Positives = 190/364 (52%), Gaps = 12/364 (3%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH----GK 68
           G+W       +  ++  A  +   +   ++D   +  +DT GA L++  +         +
Sbjct: 26  GDWTLQHYPRLKREIERARPRLDDACPVVLD--GLGALDTAGAGLLVELLGARRLTDIAR 83

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
              Q  +     L ++           ++P+RS    + K+   HIG+ +        + 
Sbjct: 84  WAPQLPAERQALLRTVAMAVAGAAGTEEEPERS----TLKDELAHIGRVVETLWEQQRTL 139

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +GL +S          +++  +  L+  +   G+  VP+V L++F+ GAV+A  GA 
Sbjct: 140 YGFIGLTLSTLLATLPRPRRWR--ITPLVAHIERTGLDAVPIVALLTFMVGAVVAFLGAT 197

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L QFGA I++++L++   LRE GVLL A+++AGR+ SA  A+IG+MK NEEIDAIR +G
Sbjct: 198 VLGQFGATIYTVNLVAYSFLREFGVLLCAILMAGRTASAFAAQIGAMKANEEIDAIRALG 257

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD + +L+ PR+ A++++LP+LT +A    I+G   V     DI    +F+       + 
Sbjct: 258 LDPIELLVLPRVLAMLLTLPILTFIAMLCGILGGLAVCVLALDISPVQYFAILEQEIPVN 317

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   GL KAP  A  I ++   EGF     + S+G++ T+ VVQSI +VI+ID+L A+F 
Sbjct: 318 HYLVGLGKAPLFAFLIAVIGCLEGFKASGSAQSVGERTTSSVVQSIFMVILIDALAALFL 377

Query: 369 FAIG 372
             +G
Sbjct: 378 MEMG 381


>gi|307638119|gb|ADN80569.1| organic solvent resistant ABC transporter [Helicobacter pylori 908]
 gi|325996719|gb|ADZ52124.1| putative ABC transport system, permease protein [Helicobacter
           pylori 2018]
          Length = 377

 Score =  291 bits (746), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 182/371 (49%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  +D S   +ID +    +   +
Sbjct: 14  DGANSVLILRGDWDFRTSVFRLDELKKNLLDH--QGSLKMDFSGCQKIDFVFGMFLFDLI 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  +    Y   + +   +GK +V+  
Sbjct: 72  KERSLNIELCNVSENNACALKVVKDWLEKEDDLESKKAGKKY---ELMITKLGKSLVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  RFH
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRFH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 IFSILFSKLNI 377


>gi|326315184|ref|YP_004232856.1| hypothetical protein Acav_0366 [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323372020|gb|ADX44289.1| protein of unknown function DUF140 [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 375

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 90/371 (24%), Positives = 178/371 (47%), Gaps = 14/371 (3%)

Query: 6   ITVFRFAGNWKSPEIS--EIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-YFM 62
             V    G W + E+        +   + K+  +     DL  +  +D +GA+L+  ++ 
Sbjct: 16  GPVAALLGRWGAAELGTRPAWKALSAQLAKTPPAAGLGWDLRGVEWLDHVGAQLLWNHWG 75

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            ++  ++ + G          ++       +  + P+  +           +G K++  +
Sbjct: 76  REWPERLSVDGAQR------DMLERVAEYTVTRRPPESPWR---LAEEVDRLGVKVLSAL 126

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                   ++G ++ +      +    +     +   +Y +G + +P+  ++ F+ G V+
Sbjct: 127 GHGRHLLELVGQLMIDLVRVVRAPR--RAPWRDISGHLYRMGATALPITAIVGFLIGVVL 184

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A   + QL QFGAE F ++++ I  +RE+G +L A+++AGRSGSAI A+IG M++ EE+D
Sbjct: 185 AYLMSLQLRQFGAESFIVNILGISLIRELGPMLAAILVAGRSGSAITAQIGVMRVTEELD 244

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R MG+     L+ PR  AL I++PL+ +     A+ G  +      ++  A F     
Sbjct: 245 AMRVMGIPHGFRLVMPRAVALAIAMPLIAVWTTLCALAGGMLAADIAMNVSPAYFVQALP 304

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           +    +N+   + K+      I ++    G  V  ++ SLG+  T  VV +I++VII+D+
Sbjct: 305 NAVGFSNLVLAMGKSVVFGVGIALIGCHWGLRVKPNTQSLGEGTTASVVNAITMVIIVDA 364

Query: 363 LFAIFYFAIGI 373
           LFAI +  +GI
Sbjct: 365 LFAIAFKNLGI 375


>gi|120554124|ref|YP_958475.1| hypothetical protein Maqu_1197 [Marinobacter aquaeolei VT8]
 gi|120323973|gb|ABM18288.1| protein of unknown function DUF140 [Marinobacter aquaeolei VT8]
          Length = 382

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 113/373 (30%), Positives = 191/373 (51%), Gaps = 12/373 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +E G    +F+G+W     S +         ++   +    D S +  +DT GA L++  
Sbjct: 19  AEFGGHTLKFSGDWTLSHYSVLNRQTTALKPRAAACNP---DFSGLGRLDTAGASLMVKL 75

Query: 62  ME--KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
           +        ++   +      L   ++        NQ        N        IGKK+ 
Sbjct: 76  LGSDALISALQRAELPDEQRALIQAVAEAM-----NQPSAAVATVNPVVAFLAEIGKKVT 130

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                    A  +G  +           +++  +   +  ++  G++ +P+V L++F+ G
Sbjct: 131 TLGQLVWLLAGFIGQTLGTLFYILPRPTRWR--ITPFVAALHDTGLNALPIVALLTFLVG 188

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           AV+A  GA  L  FGA I+++DL++   LRE GVLL A+++AGR+ SA  A+IG+MK+NE
Sbjct: 189 AVVAFLGATVLEDFGATIYTVDLVAFSFLREFGVLLAAILLAGRTASAFTAQIGAMKVNE 248

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DAIRT+GL+ V +L+ PR+ A++ SLP+LT +   S ++G ++V     DIP + F +
Sbjct: 249 ELDAIRTLGLNPVELLVVPRVLAMMFSLPILTFIGMISGMVGGAVVCAVALDIPPSQFIA 308

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                  L +   GL KAP  A  I ++   EGF V   + S+G+  T+ VVQSI +VI+
Sbjct: 309 IVERDIALKHFLVGLGKAPVFAFLIAVIGCLEGFKVAGSAQSVGEHTTSSVVQSIFMVIL 368

Query: 360 IDSLFAIFYFAIG 372
           +DS+ A+F+  +G
Sbjct: 369 LDSVAALFFMEMG 381


>gi|218528881|ref|YP_002419697.1| hypothetical protein Mchl_0851 [Methylobacterium chloromethanicum
           CM4]
 gi|218521184|gb|ACK81769.1| protein of unknown function DUF140 [Methylobacterium
           chloromethanicum CM4]
          Length = 381

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 135/374 (36%), Positives = 209/374 (55%), Gaps = 14/374 (3%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           +   G  +    G W + +     +     I    ++   +VDLS +  +DT+GA ++  
Sbjct: 17  LDAGGRVILH--GRWTADQ-GPAVESASARIAAQGRTQPVLVDLSGLARLDTLGAWVLER 73

Query: 61  F---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
               +E   G++   G       L   +       ++  +P      N         G++
Sbjct: 74  TRAEIEAAGGRLAYAGARPEHRILLGEMG------LREPEPVPQDTRNPVLRFLDTTGQR 127

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           + +  N+  S    LG V++  G        F+  + +L+ Q+  V + GVP+++LISF+
Sbjct: 128 VARGGNEILSGIAFLGEVVAAGGRVARRPQTFR--MAALVNQLEQVALRGVPIIVLISFL 185

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G ++AQQG FQL +FGA+ F ++L+ +L LRE+GVLLT++M+AGRSGSA  AEIGSM++
Sbjct: 186 VGGIVAQQGIFQLQRFGAQSFVVNLIGLLILRELGVLLTSIMVAGRSGSAFTAEIGSMRM 245

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EE+DA+R MGLD + ILI PRI AL+I LP+L  L + +A+ G  +    Y  +    F
Sbjct: 246 REEVDALRVMGLDPIEILILPRILALVIGLPILAFLGSLAALAGGGLTAAIYGGMTTDAF 305

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            +R  +  +  +   GLIKAPFMA  IGI+A  EGFAV   + SLG+ VT  VV+SI +V
Sbjct: 306 LARLQAAVSFHHFAVGLIKAPFMALTIGIIATIEGFAVEGSAESLGRHVTASVVKSIFMV 365

Query: 358 IIIDSLFAIFYFAI 371
           I++D LFA+F+ AI
Sbjct: 366 IVLDGLFAVFFAAI 379


>gi|240137395|ref|YP_002961866.1| putative ABC transporter, permease [Methylobacterium extorquens
           AM1]
 gi|240007363|gb|ACS38589.1| Putative ABC transporter, permease [Methylobacterium extorquens
           AM1]
          Length = 382

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 136/374 (36%), Positives = 209/374 (55%), Gaps = 13/374 (3%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           +   G  V    G W + +     +     I    ++   +VDLS +  +DT+GA ++  
Sbjct: 17  LDAGGGRVI-LHGRWTADQ-GPAVESASARIAAQGRTQPVLVDLSGLARLDTLGAWVLER 74

Query: 61  F---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
               +E   G++   G       L   +       ++  +P      N         G++
Sbjct: 75  TRAEIEAAGGRLAYAGARPEHRILLGEMG------LREPEPVPQDTRNPALRFLDTTGQR 128

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           + +  N+  S    LG V++  G        F+  + +L+ Q+  V + GVP+++LISF+
Sbjct: 129 VARGGNEILSGIAFLGEVVAAGGRVARRPQTFR--MAALVNQLEQVALRGVPIIVLISFL 186

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G ++AQQG FQL +FGA+ F ++L+ +L LRE+GVLLT++M+AGRSGSA  AEIGSM++
Sbjct: 187 VGGIVAQQGIFQLQRFGAQSFVVNLIGLLILRELGVLLTSIMVAGRSGSAFTAEIGSMRM 246

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EE+DA+R MGLD + ILI PRI AL+I LP+L  L + +A+ G  +    Y  +    F
Sbjct: 247 REEVDALRVMGLDPIEILILPRILALVIGLPILAFLGSLAALAGGGLTAAIYGGMTTDAF 306

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            +R  +  +  +   GLIKAPFMA  IGI+A  EGFAV   + SLG+ VT  VV+SI +V
Sbjct: 307 LARLQAAVSFHHFAVGLIKAPFMALTIGIIATIEGFAVEGSAESLGRHVTASVVKSIFMV 366

Query: 358 IIIDSLFAIFYFAI 371
           I++D LFA+F+ AI
Sbjct: 367 IVLDGLFAVFFAAI 380


>gi|163850324|ref|YP_001638367.1| hypothetical protein Mext_0891 [Methylobacterium extorquens PA1]
 gi|254559575|ref|YP_003066670.1| ABC transporter permease [Methylobacterium extorquens DM4]
 gi|163661929|gb|ABY29296.1| protein of unknown function DUF140 [Methylobacterium extorquens
           PA1]
 gi|254266853|emb|CAX22652.1| Putative ABC transporter, permease [Methylobacterium extorquens
           DM4]
          Length = 382

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 136/374 (36%), Positives = 209/374 (55%), Gaps = 13/374 (3%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           +   G  V    G W + +     +     I    ++   +VDLS +  +DT+GA ++  
Sbjct: 17  LDAAGGRVI-LHGRWTADQ-GPAVESASARIAAQGRTQPVLVDLSGLARLDTLGAWVLER 74

Query: 61  F---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
               +E   G++   G       L   +       ++  +P      N         G++
Sbjct: 75  TRAEIEAAGGRLAYAGARPEHRILLGEMG------LREPEPVPQDTRNPALRFLDTTGQR 128

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           + +  N+  S    LG V++  G        F+  + +L+ Q+  V + GVP+++LISF+
Sbjct: 129 VARGGNEILSGIAFLGEVVAAGGRVARRPQTFR--MAALVNQLEQVALRGVPIIVLISFL 186

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G ++AQQG FQL +FGA+ F ++L+ +L LRE+GVLLT++M+AGRSGSA  AEIGSM++
Sbjct: 187 VGGIVAQQGIFQLQRFGAQSFVVNLIGLLILRELGVLLTSIMVAGRSGSAFTAEIGSMRM 246

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EE+DA+R MGLD + ILI PRI AL+I LP+L  L + +A+ G  +    Y  +    F
Sbjct: 247 REEVDALRVMGLDPIEILILPRILALVIGLPILAFLGSLAALAGGGLTAAIYGGMTTDAF 306

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            +R  +  +  +   GLIKAPFMA  IGI+A  EGFAV   + SLG+ VT  VV+SI +V
Sbjct: 307 LARLQAAVSFHHFAVGLIKAPFMALTIGIIATIEGFAVEGSAESLGRHVTASVVKSIFMV 366

Query: 358 IIIDSLFAIFYFAI 371
           I++D LFA+F+ AI
Sbjct: 367 IVLDGLFAVFFAAI 380


>gi|254470335|ref|ZP_05083739.1| ABC transporter permease protein [Pseudovibrio sp. JE062]
 gi|211960646|gb|EEA95842.1| ABC transporter permease protein [Pseudovibrio sp. JE062]
          Length = 382

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 133/371 (35%), Positives = 207/371 (55%), Gaps = 5/371 (1%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            +  + +   +G W   +     ++++  +  S+      VDL A++ +DT GA L+  F
Sbjct: 16  EDGALLLLTASGAWGIRQ-GATCENLINQVAASLTHSVICVDLKAVSFLDTAGAWLLQRF 74

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
             +   + +        E+   L+    R+++ N   + S   NSF N    +G+   + 
Sbjct: 75  QMEQAEQGREVKFLYEDERFDILLKEVDRQEVDNPTEEHSG--NSFLNYLEAVGEATRQL 132

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             D+     +LG + +          + +   + +  Q     +  VP+V L+SF+ G +
Sbjct: 133 GRDTRDILAMLGSLTATITAAATHPSRLRPISIGV--QFQRSCMGAVPIVCLMSFLIGGI 190

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IAQQG F L QFGAEIF +DL  IL LREIGV+LTA+M+AGRSGSA  AE+GSMK+ EEI
Sbjct: 191 IAQQGGFYLKQFGAEIFVVDLSGILVLREIGVILTAIMVAGRSGSAYTAELGSMKMQEEI 250

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA++  GL    +LI PR+ AL+I+LP+L  LAN +A+ GA +  W Y  I    F ++ 
Sbjct: 251 DALQVTGLRVTEVLILPRLVALMIALPILVFLANIAALFGAGLTCWWYLGIVPHSFIAQL 310

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            +  T+  +  G++KAPFMA  IG++A  EG  V   S SLG+  T  VV+SI +VI++D
Sbjct: 311 QAAVTVDTLMVGIVKAPFMALIIGLIACMEGMKVEGSSESLGRHTTVSVVKSIFMVIVVD 370

Query: 362 SLFAIFYFAIG 372
            +FA+F+ +IG
Sbjct: 371 GVFAVFFASIG 381


>gi|297380678|gb|ADI35565.1| conserved hypothetical protein [Helicobacter pylori v225d]
          Length = 377

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  VD S   ++D +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKVDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  +    Y   + +   +GK IV+  
Sbjct: 72  KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKEAGKRY---ELMITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 VFSIIFSKLNI 377


>gi|308183565|ref|YP_003927692.1| putative ABC transport system permease protein [Helicobacter pylori
           PeCan4]
 gi|308065750|gb|ADO07642.1| putative ABC transport system permease protein [Helicobacter pylori
           PeCan4]
          Length = 377

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  +D S   +ID +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGSLKMDFSGCQKIDFVFGMFLFDLI 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  +    Y   + +   +GK IV+  
Sbjct: 72  KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKVGKKY---ELMITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 IFSILFSKLNI 377


>gi|295690462|ref|YP_003594155.1| hypothetical protein Cseg_3097 [Caulobacter segnis ATCC 21756]
 gi|295432365|gb|ADG11537.1| protein of unknown function DUF140 [Caulobacter segnis ATCC 21756]
          Length = 386

 Score =  290 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 107/372 (28%), Positives = 195/372 (52%), Gaps = 11/372 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G      +G+W +  + +    +  A++     D+   DL+ +   DT GA  I+  
Sbjct: 26  EQDGRPTAVLSGDWTARGLFDAGLRLAEALD---GVDNPTFDLTGVNRCDTAGAYAILRA 82

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
            ++   K +       + +L  L++   +      K + +   + F+ L   IG+ +   
Sbjct: 83  ADE-RLKPEDVKARHGVVRLLQLVAAAIQV-----KSEPAVRPSGFRALLERIGRGVFGL 136

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
            +D+ S    LG +++  G       + +     ++      G+  +P+V   +F  GAV
Sbjct: 137 FSDAFSTMAFLGHLLTAVGRSIVDPRRIR--WAPIVALCERAGLDAMPIVATTTFFIGAV 194

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A  GA  L+ FGA+++S++L+ I  +RE  +L+TA+++AGRS S+  AEIGSMK+N+EI
Sbjct: 195 VALLGANMLTDFGAQVYSVELIGISVMREFNILITAILLAGRSASSFAAEIGSMKMNQEI 254

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA++ MG+D    L+ PR  AL++++P+LT +A  + + G  +V+W   D+    F  R 
Sbjct: 255 DAMQVMGVDPYEALVLPRFAALLLTIPILTFVATIAGLAGGILVVWIVLDLSPNFFLQRI 314

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                  + + GL KAP MA  I  +  ++G  VG    +LG++VT  VV +I  +I+ID
Sbjct: 315 VDYVGPTHFWIGLSKAPVMAAVIAAIGCRQGMEVGQDVEALGRRVTAAVVHAIFAIILID 374

Query: 362 SLFAIFYFAIGI 373
           ++FA+ Y  + I
Sbjct: 375 AVFALIYMELDI 386


>gi|120609009|ref|YP_968687.1| hypothetical protein Aave_0306 [Acidovorax citrulli AAC00-1]
 gi|120587473|gb|ABM30913.1| protein of unknown function DUF140 [Acidovorax citrulli AAC00-1]
          Length = 375

 Score =  290 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 93/370 (25%), Positives = 175/370 (47%), Gaps = 12/370 (3%)

Query: 6   ITVFRFAGNWKSPEISEI--ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
             V    G W + ++       +V   + ++        DL ++  +D +GA+L+     
Sbjct: 16  GPVAALHGRWGAADLGARRTWREVSAQLAQNAPDSGLGWDLRSVDWLDHVGAQLLW---- 71

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
            + G++  + ++    Q   L        I                    +G K++  + 
Sbjct: 72  NHWGRVWPERIALDDAQRDMLDRVAEFTVIDRPPVPPWRLVEEV----DRLGVKVLHALG 127

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                  ++G ++ + G    +    +     +   +Y +G + +P+  ++ F+ G V+A
Sbjct: 128 HGRHLLELVGQLVIDLGSALRAPR--RAPWRDVSGHLYRMGATALPITAIVGFLIGVVLA 185

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
              + QL QFGAE F ++++ I  +RE+G +L A+++AGRSGSAI A+IG M++ EE+DA
Sbjct: 186 YLMSLQLRQFGAESFIVNILGISLIRELGPMLAAILVAGRSGSAITAQIGVMRVTEELDA 245

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R MG+     L+ PR  AL I++PL+ +     A+ G  +      D+  A F     +
Sbjct: 246 MRVMGIPHGFRLVMPRAVALAIAMPLIAVWTTLCALAGGMLAADIAMDVSPAYFVQALPN 305

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
               +N+   + K+      I ++    G  V  ++ SLG+  T  VV +I++VII+D+L
Sbjct: 306 AVGFSNLVLAMAKSVVFGVGIALIGCHWGLRVKPNTQSLGEGTTASVVNAITMVIIVDAL 365

Query: 364 FAIFYFAIGI 373
           FAI +  +GI
Sbjct: 366 FAIAFKNLGI 375


>gi|159184854|ref|NP_354638.2| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|159140135|gb|AAK87423.2| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
          Length = 386

 Score =  290 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 160/368 (43%), Positives = 226/368 (61%), Gaps = 6/368 (1%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            G + +  +G+W++  +S I + +   I KS  +    +DLSA+  IDT GA +I    +
Sbjct: 23  GGGSRYVLSGSWRNSNLSGIFESLDR-IEKSKPASPVDIDLSAVEAIDTTGAWIIQRLRK 81

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
                     ++   +++  +I     K   + +P         + +   IG+ +V+   
Sbjct: 82  DLEASGATVTLT-GNDRIEDVIGQLPDKAEMDVEP--VAREGLVERIFAPIGQAVVQNGA 138

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
           D  +  +ILG  +                  +++ Q+ ++GV  VP+++L+SF+ GA+IA
Sbjct: 139 DFLAGMYILGSAVRGAQMKLGRGR--GVSPAAIVNQIDHMGVRAVPIIMLMSFLIGAIIA 196

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           QQGAFQL  FGAE+F +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EEIDA
Sbjct: 197 QQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREEIDA 256

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           ++ +GL+ V +L+ PR+ AL I+LPLLTILANF+A+ GA+IV   Y  I F VF SR H 
Sbjct: 257 LKVIGLNPVGVLVFPRLVALTIALPLLTILANFAALFGAAIVALAYSGITFEVFLSRLHG 316

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
               + I  G+IKAPFMA  IGIVA  EG  VG  + SLGK VT+ VV+SI +VI++D L
Sbjct: 317 AVEESTIAAGMIKAPFMALIIGIVAAVEGMKVGGSAESLGKHVTSSVVKSIFVVILVDGL 376

Query: 364 FAIFYFAI 371
           FAIFY AI
Sbjct: 377 FAIFYAAI 384


>gi|254292866|ref|YP_003058889.1| hypothetical protein Hbal_0490 [Hirschia baltica ATCC 49814]
 gi|254041397|gb|ACT58192.1| protein of unknown function DUF140 [Hirschia baltica ATCC 49814]
          Length = 380

 Score =  290 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 112/373 (30%), Positives = 197/373 (52%), Gaps = 12/373 (3%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G  V    G W +  +  I   +    +K + S    +D+S + + DT GA ++   + +
Sbjct: 16  GDPVMVLEGAWTAFTVGAIDKPLRQLTSKDV-SKDVSLDVSQLEDFDTAGAYVVDRTLRQ 74

Query: 65  YHGK----IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
                    K+ G +  +  L + ++    + +K  K +       F  L   +G   V 
Sbjct: 75  LGAPSGSLAKIVGDTHSVISLLTAVNAAKPEPVKKAKDRH-----GFTQLLDRVGHGTVD 129

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
            + +       +G   +       +  K +    S++  M   G++ +P+V ++SF  G 
Sbjct: 130 ALKEGWGILEFIGEAFTTVFFLLLNPKKIR--WTSVVAIMEEAGLNALPIVSMLSFFIGI 187

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           VIA  G   L  FGA++F+++++  L LRE G++LTA+++AGR+ S+  AEIG+MK+ EE
Sbjct: 188 VIAFLGVNLLQSFGAQVFTVEMVGFLMLREFGLVLTAILLAGRTDSSFTAEIGAMKMREE 247

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +DA+R MGL+ + +L++PR+ AL++  P L+  A  S ++G  +V+W   DI  A+F  R
Sbjct: 248 VDAMRVMGLNPMEVLVAPRLIALLVMTPFLSFFAMISGLVGGLLVMWGVMDISPAMFIQR 307

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
              T    N + G++KAP  A  I +V  ++G  V     SLG++ T+ VVQ+I +VI+I
Sbjct: 308 IQDTVPGQNFWVGIVKAPVFATVIALVGCRQGLLVSGDVQSLGQRTTSSVVQAIFLVIVI 367

Query: 361 DSLFAIFYFAIGI 373
           D++FAI Y  +G+
Sbjct: 368 DAIFAILYMEMGL 380


>gi|77463402|ref|YP_352906.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides
           2.4.1]
 gi|77387820|gb|ABA79005.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides
           2.4.1]
          Length = 366

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 108/366 (29%), Positives = 194/366 (53%), Gaps = 15/366 (4%)

Query: 11  FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK-- 68
             G      + E    +              +D++A+  +DT GA  ++   ++      
Sbjct: 13  LRGRLTIETLPETQRSLGSV------GAGEQIDMAAVEALDTAGAWALLQAQKRAEAAGQ 66

Query: 69  -IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
            +++  +S     L   ++      +   + +R        +   ++G+++ + +  S +
Sbjct: 67  ALEIVNLSESHRHLLETVAA----AMPEPERRRRTIPGRPDDGLANLGQEVAQGLRGSLT 122

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
                G V+++ G       + K  L  L+  M   G + VP+V L+ F+ G V+A QG+
Sbjct: 123 SVGFFGEVVTHLGALVLHPTRLK--LTPLVHHMQEAGWNAVPIVSLMGFLIGIVLAFQGS 180

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGAE++ +DL++I  LRE+G+LLTA+++AGRS SA  A IGSMK+ EEIDA+R +
Sbjct: 181 TQLKSFGAEVYVVDLVAISILRELGILLTAIIVAGRSASAFTAAIGSMKMREEIDAMRVL 240

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GLD +  L+ PR+ AL+I LP L  +A+ + ++G  ++ W    I   +F ++  +   +
Sbjct: 241 GLDPIDRLVLPRLIALVILLPALGFIASLAGLVGGGLMAWIDLGITPGMFRTQLLADTDV 300

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           ++   GL+KAPF A  I ++   +G  V  ++ SLG   +  VVQ+I +VI++D+LF+IF
Sbjct: 301 SHAIIGLVKAPFFAVIIAVIGCHQGMQVSGNAESLGSHTSRSVVQAIFLVIVVDALFSIF 360

Query: 368 YFAIGI 373
           +   G+
Sbjct: 361 FAVWGL 366


>gi|114570554|ref|YP_757234.1| hypothetical protein Mmar10_2004 [Maricaulis maris MCS10]
 gi|114341016|gb|ABI66296.1| protein of unknown function DUF140 [Maricaulis maris MCS10]
          Length = 384

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 118/375 (31%), Positives = 188/375 (50%), Gaps = 11/375 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            E   T+    G+W    I    D+ + A+  S    S +VD+S +  +DT GA L+   
Sbjct: 18  EEGERTILEPHGDWVIDTIGR-HDNAIRAVEASADPCSIVVDVSHLGRVDTAGAYLLGRA 76

Query: 62  MEKYH---GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
             K           G    + +L   +    +    ++ P        F      +G  I
Sbjct: 77  TRKCPTPDADFHFVGQHRTVRRLIEEVRMRTQVCGPDEVPTF-----GFIKALARLGAGI 131

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
                ++       G  ++         ++F+  L   +  M  VGV+ +P+V  ++F  
Sbjct: 132 EVAYQEAVDTFAFFGKTLTTGLSCFIQPWRFR--LTPTVWAMEEVGVNALPIVATLTFFI 189

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GAV+A  GA  L  FGA +F++DL+ +  LRE GVL+TA+M+A RS SA  A IG+MK+ 
Sbjct: 190 GAVVAYMGATLLQSFGASVFTVDLVGLAVLREFGVLITAIMLAARSDSAFTASIGAMKMQ 249

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           +EIDA+R +GLD    L+ PR+ A ++  PLLT  A  + I G  +V W   DI  A+FF
Sbjct: 250 QEIDAMRVLGLDPYEALVLPRVVACVLMAPLLTFGAMVAGIFGGMLVAWTAQDISPALFF 309

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +R HS   +++ + G+ KAP     + I+  ++G  V     SLG++VT  VVQSI  +I
Sbjct: 310 TRLHSEIDISHFWVGMSKAPVFGMVVAIIGCRQGMQVQGDVESLGRRVTASVVQSIFAII 369

Query: 359 IIDSLFAIFYFAIGI 373
           ++++LFA+ Y  + I
Sbjct: 370 VLEALFAMMYLELEI 384


>gi|115353001|ref|YP_774840.1| hypothetical protein Bamb_2950 [Burkholderia ambifaria AMMD]
 gi|115282989|gb|ABI88506.1| protein of unknown function DUF140 [Burkholderia ambifaria AMMD]
          Length = 374

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 101/366 (27%), Positives = 173/366 (47%), Gaps = 11/366 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             R  G W +  ++     V   +        +  DLS I  +D +G + +     +  G
Sbjct: 19  TVRLYGQWTALALARNRGAVARRVAGIASGRVSEWDLSGIERLDHVGGQALW----RVWG 74

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
           +    GV+    Q  ++     R   + + P+R   +     L    G  +  F      
Sbjct: 75  RKLPDGVALSPTQ-RTIFERIERLDSQREAPERVVHFGPITRL----GFMLFAFAEHLQG 129

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              + GLVI +                     +Y  G   +P+  L++F+ G V++   A
Sbjct: 130 GIAMFGLVILDALSVLRRPKTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 187

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M
Sbjct: 188 QQLQTFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     LI PR+ AL +++PLL +  N  A+ G ++       I    F         +
Sbjct: 248 GIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDINYFVRSLPGVVPI 307

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN++ G+ K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI 
Sbjct: 308 ANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIM 367

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 368 FQNVGL 373


>gi|325998313|gb|ADZ50521.1| hypothetical protein hp2017_1400 [Helicobacter pylori 2017]
          Length = 377

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 105/371 (28%), Positives = 182/371 (49%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  +D S   +ID +    +   +
Sbjct: 14  DGANSVLILRGDWDFRTSVFRLDELKKNLLDH--QGSLKMDFSGCQKIDFVFGMFLFDLI 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     KK   +  +    Y   + +   +GK +V+  
Sbjct: 72  KERSLNIELCNVSENNACALKVVKDWLVKKNDLESKKAGKKY---ELMITKLGKSLVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  RFH
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRFH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 IFSILFSKLNI 377


>gi|159044594|ref|YP_001533388.1| hypothetical protein Dshi_2050 [Dinoroseobacter shibae DFL 12]
 gi|157912354|gb|ABV93787.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
          Length = 384

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 124/363 (34%), Positives = 206/363 (56%), Gaps = 14/363 (3%)

Query: 11  FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK 70
            +G+     ++++   +         + S  +DLS I  IDT GA L+          ++
Sbjct: 36  LSGDLTIYGVADLQRQLAAR-----PAGSLTLDLSGIGRIDTAGAWLLAELAR--GEGVR 88

Query: 71  LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAH 130
           L G    + +L + ++     K + + P+R+    +  +    +G+++V+          
Sbjct: 89  LVGAPDKVARLIANVA-----KAEPEHPERTETPPTLTDRLERLGRQVVEGTKFLGGLTG 143

Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190
           +LGLV++  G       +F+  + +L+     VG+  VP+V L++F+ G V+A QGA QL
Sbjct: 144 MLGLVLARFGRALRHPREFR--MTALVHHCEEVGLRAVPIVALMAFLIGIVLAFQGASQL 201

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
            QFGAE+F +DL+SI  LRE+G+LLTA+++AGR+ S+  A IGSMK+ EEIDA+RT+GLD
Sbjct: 202 RQFGAEVFVVDLISISILRELGILLTAIIVAGRTASSFTAAIGSMKMREEIDAMRTLGLD 261

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
              +L  PR+ AL+I LP+L ++AN S ++G +++ W    I  A+F +R      + + 
Sbjct: 262 PAMLLFLPRVLALLIMLPILGLIANLSGLLGGALMSWIELGISPAMFQTRLIEGTDINHA 321

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             GL+KAPF A  IG+V    G  V  ++ SLG+  +  VV +I  VI+ D+ F+IF+  
Sbjct: 322 VVGLVKAPFFAILIGVVGCHAGMQVEGNAESLGRMTSGAVVTAIFAVIVTDAAFSIFFAQ 381

Query: 371 IGI 373
           +GI
Sbjct: 382 MGI 384


>gi|326388333|ref|ZP_08209929.1| hypothetical protein Y88_3216 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326207065|gb|EGD57886.1| hypothetical protein Y88_3216 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 370

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 112/371 (30%), Positives = 193/371 (52%), Gaps = 14/371 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ENG T   F+G      +  +   +     + I++  A +DL+ +  +DT+GA      
Sbjct: 12  GENGDT-LVFSGPMTVATLGGLDARL-----REIETPIARIDLADVPMMDTVGAWTCWRL 65

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
                 +I       H  +    +     K     +P ++     +  +   +G  +   
Sbjct: 66  SRDTGAEI------VHPCEAAERLIGALEKVDDGGEPTQAGGLPVWLRVPAKVGDTVFGL 119

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
              +       G ++  T        +F+    +L+ QM  VGV+ + +V L+SF+ G V
Sbjct: 120 AAGAVEVLGFFGQMLLATWGLLRHPGRFR--FNALVHQMELVGVNALAIVGLMSFLVGIV 177

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IAQQGA QL QFGAE+++++L+  L LRE+G+L+TA+M+AGRSGSA  A++G+MK+NEEI
Sbjct: 178 IAQQGAVQLRQFGAEVYTVNLVGRLTLRELGILMTAIMVAGRSGSAFAAQLGTMKLNEEI 237

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+RT+G+  +  L+ PRI A ++ LP+L + +    IIG + +     DIPF  F +R 
Sbjct: 238 DAMRTIGVSPMEALVLPRILATVLMLPVLGVYSAVVGIIGGAFLSSLTLDIPFFSFLARI 297

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                + +++ GL K P     + +    +G  V  ++  +G + T+ VV +I  VI++D
Sbjct: 298 REVVPVHDVWVGLFKGPVFGLIVSVAGCYQGMQVKANAEEVGLRTTSAVVMAIFTVIVLD 357

Query: 362 SLFAIFYFAIG 372
           + FA+F+  +G
Sbjct: 358 AFFAVFFTEVG 368


>gi|268678744|ref|YP_003303175.1| hypothetical protein Sdel_0102 [Sulfurospirillum deleyianum DSM
           6946]
 gi|268616775|gb|ACZ11140.1| protein of unknown function DUF140 [Sulfurospirillum deleyianum DSM
           6946]
          Length = 376

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 109/373 (29%), Positives = 184/373 (49%), Gaps = 13/373 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +  G +V    G W    +  +         K     S   D S+I   DT G  L+++ 
Sbjct: 12  NSEGFSVIV-RGKWVKESVPLLQSAFTSLTCK--PHASYTFDFSSIETFDTHGIMLLLHH 68

Query: 62  MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
           ++K   +   ++  G S   + LFS+    +  ++   K +R        +   ++G+ +
Sbjct: 69  IKKLEKEYCIVQTTGASDAFKTLFSICQTHYPHEVPRPKKERM-----VLSFLENVGRTM 123

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           ++      S     G +    G         +  L + +  +   G   +P+++L SF+ 
Sbjct: 124 MEGYKTLASFFSFTGELSHAIGALFFKPANIR--LKATLYHIEQSGAGAIPIILLTSFLI 181

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G VIA QGA QL +FGA IF +++++I  +RE+  LLTA+++AGRS S+  A+IG MK+ 
Sbjct: 182 GVVIAYQGASQLEKFGANIFIVEMITISAVRELAPLLTAIVVAGRSASSYTAQIGVMKLT 241

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           +EIDA+ +MG      L+ PR++ALIISLPLL   A+  +  G  ++     D+ F  F 
Sbjct: 242 DEIDAMSSMGFSPWNFLVLPRLFALIISLPLLVFFADVVSTFGGMVIASTRLDVSFVEFI 301

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
            R   T  L ++  GL+KAP   C I  +    GF +  ++ S+GK  T  VV +I  VI
Sbjct: 302 DRIKETVALKHLVIGLVKAPIFGCIIATIGCFRGFQITSNTESVGKYTTISVVNAIFWVI 361

Query: 359 IIDSLFAIFYFAI 371
            +D+L ++F   +
Sbjct: 362 AMDALISVFLTEL 374


>gi|108563874|ref|YP_628190.1| hypothetical protein HPAG1_1449 [Helicobacter pylori HPAG1]
 gi|107837647|gb|ABF85516.1| ABC transport system permease [Helicobacter pylori HPAG1]
          Length = 377

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +          +D S   ++D +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGPLKMDFSGCQKVDFVFGMFLFDLI 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  +    Y   + L   +GK IV+  
Sbjct: 72  KERSLNIELCNVSENNACALKVVKDWLEKEEDLETKKAGKHY---ELLITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  RFH
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADSFAILGGMFAIKYQLDLGFPSYIDRFH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 VFSIVFSKLNI 377


>gi|15612424|ref|NP_224077.1| hypothetical protein jhp1359 [Helicobacter pylori J99]
 gi|4155971|gb|AAD06935.1| putative [Helicobacter pylori J99]
          Length = 377

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 103/371 (27%), Positives = 182/371 (49%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  +D S   +ID +    +   +
Sbjct: 14  DGANSVLILRGDWDFRTSVFRLDELKKNLLDH--QGSLKMDFSGCQKIDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  +    Y   + +   +GK +V+  
Sbjct: 72  KERSLNIELCNVSENNACALKVVKDWLEKEDDLESKKAGKKY---ELMITKLGKSLVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   ++ L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CIIPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 IFSILFSKLNI 377


>gi|15646075|ref|NP_208257.1| hypothetical protein HP1466 [Helicobacter pylori 26695]
 gi|2314643|gb|AAD08507.1| conserved hypothetical integral membrane protein [Helicobacter
           pylori 26695]
          Length = 377

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +          +D S   ++D +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGPLKMDFSGCQKVDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  +    Y   + L   +GK IV+  
Sbjct: 72  KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKHY---ELLITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  RFH
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRFH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 IFSIIFSKLNI 377


>gi|311232876|gb|ADP85730.1| protein of unknown function DUF140 [Desulfovibrio vulgaris RCH1]
          Length = 401

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 118/367 (32%), Positives = 197/367 (53%), Gaps = 8/367 (2%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           + RF+G W     +     +   +    +      DL+ +  +DT GA +I  F      
Sbjct: 42  ILRFSGAWDVATAARARGQL-QHLAIPAECGDLTFDLTGVLRLDTAGALVITTF----RT 96

Query: 68  KIKLQGVSTHIEQLFSLISFTHR-KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
            ++ QG++  +    +  +   R   I   +       ++       IG  IV+    + 
Sbjct: 97  ALEKQGIAPLLHCAPAHNALIDRVAAIDMSEAPTVRHASALARTLNAIGASIVEETEQAV 156

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
                +G+++ +        ++F+   +SL   M   GV  VP+V L+SF+ G V A  G
Sbjct: 157 GILAFMGMLVISLVGLVLRPWRFR--WVSLCSHMEQTGVQAVPIVALLSFLIGLVTAYMG 214

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A Q ++FGA++F I+L+ I  LRE+GVLLTA+++AGRSGS+  A+IG+M  NEE+ A+R 
Sbjct: 215 AEQFARFGAQVFVINLLEISTLREMGVLLTALVVAGRSGSSFTAQIGAMVANEEVSAMRA 274

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +GLD + +L+ PR+ AL++ LP+L  +A+   I+G  +  W    I  A F +RFH    
Sbjct: 275 LGLDPIEVLVVPRVLALVVMLPILAFIADIMGILGGGVAAWGTLGIDPANFTARFHEIVH 334

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L N   G+IKAPF A  I +V   +GF V   + S+G+  T  VV++I +VI++++LFAI
Sbjct: 335 LRNFVVGMIKAPFFALVIALVGCFQGFRVTGSAESVGRLTTQAVVEAIFMVIVLNALFAI 394

Query: 367 FYFAIGI 373
            + ++G+
Sbjct: 395 LFTSLGV 401


>gi|300312192|ref|YP_003776284.1| organic solvents resistance ABC transporter permease
           [Herbaspirillum seropedicae SmR1]
 gi|300074977|gb|ADJ64376.1| ABC-type transport system involved in resistance to organic
           solvents, permease component protein [Herbaspirillum
           seropedicae SmR1]
          Length = 380

 Score =  289 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 108/365 (29%), Positives = 194/365 (53%), Gaps = 4/365 (1%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           V    G+W       ++  +  A  +    +  +++ SA++  DT+GA+L++  +     
Sbjct: 19  VLHVEGDWTLRNYRALSRQIAQA--RPALGEQTVLEFSALSAFDTVGAKLLVDLLGVPAA 76

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
             + Q  ST      +L++     K                ++   +G   +     +  
Sbjct: 77  LRQTQADSTLAPAWRALLAVVAEAKAIAMPKPAPPRQAWITDMLERVGAATLSLRACALG 136

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +GL +           +++  + +++ Q+   G+  VP+V L++F+ GAV+A  GA
Sbjct: 137 LLGFMGLCLQTLLSSFWRPSRWR--VTAVVAQIEQTGLDAVPIVSLLTFMVGAVVAFLGA 194

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L+ FGA I+++DL++   LRE  VLLTA+++AGR+ S+  A+IGSMK NEEIDAIR +
Sbjct: 195 TVLANFGASIYTVDLVAFSFLREFAVLLTAILMAGRTASSFTAQIGSMKANEEIDAIRAL 254

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GLD +++L+ PR+ AL++++P LT +A  S + G ++V     DI   +F S       +
Sbjct: 255 GLDPIKLLVLPRLIALLVAMPALTFIAMLSGLFGGAMVCALSLDISPTMFLSLLQQDVGI 314

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   G++KAP  A  + ++   EGF V   + S+G+  T+ VVQSI +VI++D+L A+F
Sbjct: 315 RHFILGMVKAPLFAFVVAVIGCNEGFKVSGSAQSVGQHTTSSVVQSIFVVILLDALAALF 374

Query: 368 YFAIG 372
           +  +G
Sbjct: 375 FMEMG 379


>gi|283957032|ref|ZP_06374504.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 1336]
 gi|283791533|gb|EFC30330.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 1336]
          Length = 369

 Score =  289 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 113/369 (30%), Positives = 186/369 (50%), Gaps = 13/369 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
                G W    I ++     +A+   IQS   I D   +  IDT G    +     ++ 
Sbjct: 11  TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKD 67

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
            + KI  +G+++  + LF L    +++  K +K  ++F           +GK  ++ +  
Sbjct: 68  KNIKITKEGLNSRFQTLFELCEKNYQRLSKTKKSHKNFS-----EYFIDLGKLSLELLKI 122

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                +  G   ++      +   F+   ++ +  +       +P+VIL + + G V+A 
Sbjct: 123 LRKFINFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q A+QL+QFGA IF +DLM I   RE+  L+ A++IAGRS S+  A+IG MKI +EI A+
Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            TMG      +I PR+ AL++++PL+  +++  +IIG  +V     DI FA F  RF   
Sbjct: 241 NTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREA 300

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             + +IF GL+KAP     IG++A   GF V   + S+G   T  VV +I  VI  D+LF
Sbjct: 301 VDIKHIFIGLVKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF 360

Query: 365 AIFYFAIGI 373
           ++   + GI
Sbjct: 361 SVILTSAGI 369


>gi|217033903|ref|ZP_03439327.1| hypothetical protein HP9810_870g35 [Helicobacter pylori 98-10]
 gi|216943666|gb|EEC23111.1| hypothetical protein HP9810_870g35 [Helicobacter pylori 98-10]
          Length = 377

 Score =  289 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 179/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +          +D S   ++D +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGPLKMDFSGCQKVDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            +    I+L  VS +      ++     K+   +  +    Y   + L   +GK IVK  
Sbjct: 72  RERSLNIELCNVSENNACALKVVKDWLEKEEDLESKEAGKHY---ELLITKLGKSIVKTY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSAFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 VFSIIFSKLNI 377


>gi|172061853|ref|YP_001809505.1| hypothetical protein BamMC406_2812 [Burkholderia ambifaria MC40-6]
 gi|171994370|gb|ACB65289.1| protein of unknown function DUF140 [Burkholderia ambifaria MC40-6]
          Length = 374

 Score =  289 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 101/366 (27%), Positives = 173/366 (47%), Gaps = 11/366 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             R  G W +  ++     V   +        +  DLS I  +D +G + +     +  G
Sbjct: 19  TVRLYGQWTALALARNRGAVARRVAGIASGRVSEWDLSGIERLDHVGGQALW----RVWG 74

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
           +    GV+    Q  ++     R   + + P+R   +     L    G  +  F      
Sbjct: 75  RKLPDGVALSTTQ-RTIFERIERLDSQREAPERVVHFGPITRL----GFMLFAFAEHLQG 129

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              + GLVI +                     +Y  G   +P+  L++F+ G V++   A
Sbjct: 130 GIAMFGLVILDALSVLRRPKTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 187

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M
Sbjct: 188 QQLQTFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     LI PR+ AL +++PLL +  N  A+ G ++       I    F         +
Sbjct: 248 GIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDINYFVRSLPGVVPI 307

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN++ G+ K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI 
Sbjct: 308 ANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIM 367

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 368 FQNVGL 373


>gi|317010161|gb|ADU80741.1| putative ABC transport system permease protein [Helicobacter pylori
           India7]
          Length = 377

 Score =  289 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 102/371 (27%), Positives = 181/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +          +D S   ++D +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGPLKMDFSGCQKVDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  +    Y   + +   +GK IV+  
Sbjct: 72  KERSLNIELCNVSENNACALKVVKDWLEKEEDLESEKAGKKY---ELMITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL + GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQEMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAINYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 VFSIIFSKLNI 377


>gi|194364302|ref|YP_002026912.1| hypothetical protein Smal_0524 [Stenotrophomonas maltophilia
           R551-3]
 gi|194347106|gb|ACF50229.1| protein of unknown function DUF140 [Stenotrophomonas maltophilia
           R551-3]
          Length = 373

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 114/364 (31%), Positives = 194/364 (53%), Gaps = 13/364 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           + R +G W     +  A +V+  +  ++      +D + I ++D+ G   ++    +   
Sbjct: 21  LIRLSGTWTLKT-ALAAAEVLRDVPDTLTG----IDATGIEKMDSAGVLQVLRVAHRADL 75

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
                      +   +L+           KP+R F           +G  +    ++  +
Sbjct: 76  GEDALQFRPDHQ---ALVCTIEEVADDRPKPKRDF---GVLAALERLGVSVHATGHNIKA 129

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               LG  +           +F+  L + + QM  VG+  VP+V L+S++ GAVIA  G+
Sbjct: 130 LCSFLGENLVKAARLVKEPRRFR--LTATVHQMEQVGLDAVPLVALLSYLVGAVIAFLGS 187

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L  FGAEI+ ++L++I  LRE  VLLTA+++AGR+ SA  A+IG+MK  EEIDA+RT+
Sbjct: 188 TILRDFGAEIYVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKAREEIDAMRTL 247

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GLD + +L+ PR++AL+++LPLLT +A  + + G   V     DIP  ++ +R H T  +
Sbjct: 248 GLDPIDLLVLPRLFALLVTLPLLTFIAMVAGLAGGITVGAFDLDIPPQMYIARMHDTMEV 307

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            ++  GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VIIID+  A++
Sbjct: 308 RHMLVGLSKAPVFALVIGLIGCLEGLKVEGTAQSVGERTTSSVVQTISLVIIIDAFAALW 367

Query: 368 YFAI 371
           +  +
Sbjct: 368 FMHM 371


>gi|170748370|ref|YP_001754630.1| hypothetical protein Mrad2831_1952 [Methylobacterium radiotolerans
           JCM 2831]
 gi|170654892|gb|ACB23947.1| protein of unknown function DUF140 [Methylobacterium radiotolerans
           JCM 2831]
          Length = 384

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 138/374 (36%), Positives = 217/374 (58%), Gaps = 16/374 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S +G       G W + + +   +     I  + ++    VDLS I  +DT+GA ++   
Sbjct: 21  SADGR--LALDGRWTADQ-APTVEAAAARIAAAGRAGPVAVDLSGIERLDTLGAWVL--- 74

Query: 62  MEKYHGKIKLQGVSTHI----EQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
            E+   +I+  G +        +   L+     ++     P+R   +     L    G++
Sbjct: 75  -ERTRAEIEQAGSALTYLGARPEHRILLGEVRLREPDAPPPRR---HGPVVGLLDATGRR 130

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
            V+  ++  +    LG +I+  G        F+G   +LI Q+  V ++G P+++LISF+
Sbjct: 131 TVQGGHEFVTALAFLGELIAACGRVALRPGTFRGN--ALINQIQQVALNGTPIIVLISFL 188

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G ++AQQG FQL +FGA+ F ++L+ +L LRE+GVLLT++M+AGRSGSAI AEIGSM++
Sbjct: 189 VGGIVAQQGIFQLQRFGAQTFVVNLIGLLILREMGVLLTSIMVAGRSGSAITAEIGSMRM 248

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EE+DA+R MGLD V ILI PR+ AL+I LP+LT++ + +A+ G  +    Y  +    F
Sbjct: 249 REEVDALRVMGLDPVEILIVPRVLALMIGLPMLTLIGDLAALAGGGLTAMLYGGLTLDQF 308

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
             R  +   + ++  GLIKAPFMA  IG++A  EGFAV   + SLG+ VT  VV+SI +V
Sbjct: 309 LVRLQAAVGVHHVMVGLIKAPFMALTIGVIATIEGFAVEGSAESLGRHVTASVVKSIFMV 368

Query: 358 IIIDSLFAIFYFAI 371
           I++D LFA+F+ AI
Sbjct: 369 IVLDGLFAVFFAAI 382


>gi|126462257|ref|YP_001043371.1| hypothetical protein Rsph17029_1489 [Rhodobacter sphaeroides ATCC
           17029]
 gi|126103921|gb|ABN76599.1| protein of unknown function DUF140 [Rhodobacter sphaeroides ATCC
           17029]
          Length = 366

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 109/366 (29%), Positives = 194/366 (53%), Gaps = 15/366 (4%)

Query: 11  FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK-- 68
             G      + E    +              +D++A+  +DT GA  I+   ++      
Sbjct: 13  LRGRLTIETLPETQRSLGSV------GAGGQIDMAAVEALDTAGAWAILQAQKRAEAAGQ 66

Query: 69  -IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
            +++  +S     L   ++      +   + +R        +   ++G+++ + +  S +
Sbjct: 67  ALEIVNLSESHRHLLETVAA----AMPEPERRRRTIPGRPDDGLANLGQEVAQGLRGSLT 122

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
                G V+++ G       + K  L  L+  M   G + VP+V L+ F+ G V+A QG+
Sbjct: 123 SVGFFGEVVAHLGALVLHPTRLK--LTPLVHHMQEAGWNAVPIVSLMGFLIGIVLAFQGS 180

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGAE++ +DL++I  LRE+G+LLTA+++AGRS SA  A IGSMK+ EEIDA+R +
Sbjct: 181 TQLKSFGAEVYVVDLVAISILRELGILLTAIIVAGRSASAFTAAIGSMKMREEIDAMRVL 240

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GLD +  L+ PR+ AL+I LP L  +A+ + ++G  ++ W    I   +F ++  +   +
Sbjct: 241 GLDPIDRLVLPRLIALVILLPALGFIASLAGLVGGGLMAWIDLGITPGMFRTQLLADTDV 300

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           ++   GL+KAPF A  I ++   +G  V  ++ SLG   +  VVQ+I +VI++D+LF+IF
Sbjct: 301 SHAIIGLVKAPFFAVIIAVIGCHQGMQVSGNAESLGSHTSRSVVQAIFLVIVVDALFSIF 360

Query: 368 YFAIGI 373
           +   G+
Sbjct: 361 FAVWGL 366


>gi|46579026|ref|YP_009834.1| STAS domain-containing protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46448439|gb|AAS95093.1| STAS domain protein [Desulfovibrio vulgaris str. Hildenborough]
          Length = 406

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 118/367 (32%), Positives = 197/367 (53%), Gaps = 8/367 (2%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           + RF+G W     +     +   +    +      DL+ +  +DT GA +I  F      
Sbjct: 47  ILRFSGAWDVATAARARGQL-QHLAIPAECGDLTFDLTGVLRLDTAGALVITTF----RT 101

Query: 68  KIKLQGVSTHIEQLFSLISFTHR-KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
            ++ QG++  +    +  +   R   I   +       ++       IG  IV+    + 
Sbjct: 102 ALEKQGIAPLLHCAPAHNALIDRVAAIDMSEAPTVRHASALARTLNAIGASIVEETEQAV 161

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
                +G+++ +        ++F+   +SL   M   GV  VP+V L+SF+ G V A  G
Sbjct: 162 GILAFMGMLVISLVGLVLRPWRFR--WVSLCSHMEQTGVQAVPIVALLSFLIGLVTAYMG 219

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A Q ++FGA++F I+L+ I  LRE+GVLLTA+++AGRSGS+  A+IG+M  NEE+ A+R 
Sbjct: 220 AEQFARFGAQVFVINLLEISTLREMGVLLTALVVAGRSGSSFTAQIGAMVANEEVSAMRA 279

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +GLD + +L+ PR+ AL++ LP+L  +A+   I+G  +  W    I  A F +RFH    
Sbjct: 280 LGLDPIEVLVVPRVLALVVMLPILAFIADIMGILGGGVAAWGTLGIDPANFTARFHEIVH 339

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L N   G+IKAPF A  I +V   +GF V   + S+G+  T  VV++I +VI++++LFAI
Sbjct: 340 LRNFVVGMIKAPFFALVIALVGCFQGFRVTGSAESVGRLTTQAVVEAIFMVIVLNALFAI 399

Query: 367 FYFAIGI 373
            + ++G+
Sbjct: 400 LFTSLGV 406


>gi|90417915|ref|ZP_01225827.1| possible permease protein, ABC-type transporter [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90337587|gb|EAS51238.1| possible permease protein, ABC-type transporter [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 377

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 141/374 (37%), Positives = 221/374 (59%), Gaps = 9/374 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
            +G  V R +G+W +  +  + D V  A    +     +VD   +  IDT GA L+   +
Sbjct: 10  RDGGLVLRASGDWLARTVGSVEDTVAEAGAADL-GRQVVVDCGDVARIDTAGALLLEKLV 68

Query: 63  EKYHG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
                    ++L+ VS   + LF ++     ++    + ++    N   +L    G+  V
Sbjct: 69  RGLGANGRDVRLEAVSERDQPLFDVVRKALDRERPQPEKRK---TNRILDLVAATGRGSV 125

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
              ++     +I+G  +    +      + +    ++  Q+  +G+  VP++ L+SF+ G
Sbjct: 126 AVKDEIVVALNIIGGAMVGGVQRLTGKTQIRP--AAIFAQVEQMGLRAVPIIFLMSFLIG 183

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           A+IAQQGAFQL +FG E+++++L +IL LREIGVLLTA+MIAGRSGSAI AEIGSMK+ E
Sbjct: 184 AIIAQQGAFQLRRFGGELYAVNLAAILILREIGVLLTAIMIAGRSGSAITAEIGSMKMRE 243

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDA+  +GL+ + +L+ PR+ AL+I LPLL  +AN + ++GA + +  Y DI FA F  
Sbjct: 244 EIDALHVIGLNPIGVLVFPRLVALVIVLPLLAFIANLAGLLGAMLTLNIYSDISFASFGQ 303

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
               +  +  +F+G+IKAPFMA  IG++A  EG  VG  + SLG +VT  VV+SI +VI+
Sbjct: 304 GVQYSVDMFTVFSGVIKAPFMAVMIGLIASAEGMKVGGSAESLGLRVTASVVKSIFLVIL 363

Query: 360 IDSLFAIFYFAIGI 373
           +D LFAIFY +IG+
Sbjct: 364 MDGLFAIFYASIGL 377


>gi|221069470|ref|ZP_03545575.1| protein of unknown function DUF140 [Comamonas testosteroni KF-1]
 gi|220714493|gb|EED69861.1| protein of unknown function DUF140 [Comamonas testosteroni KF-1]
          Length = 375

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 98/371 (26%), Positives = 178/371 (47%), Gaps = 10/371 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S +G       G W + E+ +      +A            DL  +  +D IGA+L+   
Sbjct: 14  SRDGQQWAVPVGRWSAAELGDRHIWRRLAPQIRAVPKGVAWDLQQMVWLDHIGAQLLWEQ 73

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
             +      L   + +   +   ++     ++   KP+ S +      L    G+ ++  
Sbjct: 74  WGRTWPARLLT--TKNQRSMLERVA--RFSEVPEAKPEPSGWMCEVNRL----GQMVIDA 125

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                +   ++G ++ +      +   F+G    +   +Y  G + +P+  L+ F+ G V
Sbjct: 126 CGHFSNLIQLVGQLLLDCLRLLRNP--FRGPWRDISGHLYATGATALPITALVGFLIGVV 183

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A   A QL QFGAE F ++++ I  +RE+G LL A+++AGRSGSAI A+IG M++ EE+
Sbjct: 184 LAYLMALQLRQFGAESFIVNILGISLIRELGPLLAAILVAGRSGSAITAQIGVMRVTEEL 243

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA++ MG+     L+ PR  AL +S+PL+ +    +A+ G  +      DI  + F    
Sbjct: 244 DAMQVMGISQGYRLVLPRALALAVSMPLVALWTILAALAGGMVAADLTMDITPSYFIQSL 303

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            +   + N+   + K+      I ++    G  V  ++ SLG+  T  VV SI++VII+D
Sbjct: 304 PAAVKIGNLVLAMGKSVVFGVLIALIGCHWGLKVEPNTQSLGRGTTAAVVSSITMVIIVD 363

Query: 362 SLFAIFYFAIG 372
           ++FAI +  +G
Sbjct: 364 AIFAILFRNVG 374


>gi|210135633|ref|YP_002302072.1| ABC transporter permease protein [Helicobacter pylori P12]
 gi|210133601|gb|ACJ08592.1| ABC transporter permease protein [Helicobacter pylori P12]
          Length = 377

 Score =  289 bits (739), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 103/371 (27%), Positives = 179/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +          +D S   ++D +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGPLKMDFSGCQKVDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            +    I+L  VS +      ++     K+   +  +    Y   + L   +GK IV+  
Sbjct: 72  RERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKHY---ELLITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 VFSIVFSKLNI 377


>gi|120603385|ref|YP_967785.1| hypothetical protein Dvul_2342 [Desulfovibrio vulgaris DP4]
 gi|120563614|gb|ABM29358.1| protein of unknown function DUF140 [Desulfovibrio vulgaris DP4]
          Length = 406

 Score =  289 bits (739), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 118/367 (32%), Positives = 196/367 (53%), Gaps = 8/367 (2%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           + RF+G W     +     +   +    +      DL+ +  +DT GA +I  F      
Sbjct: 47  ILRFSGAWDVATAARARGQL-QHLAIPAECGDLTFDLTGVLRLDTAGALVITTF----RT 101

Query: 68  KIKLQGVSTHIEQLFSLISFTHR-KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
            ++ QG++  +    +  +   R   I   +       ++       IG  IV+    + 
Sbjct: 102 ALEKQGIAPLLHCAPAHNALIDRVAAIDMSEAPTVRHASALARTLNAIGASIVEETEQAV 161

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
                +G+ + +        ++F+   +SL   M   GV  VP+V L+SF+ G V A  G
Sbjct: 162 GILAFMGMFVISLVGLVLRPWRFR--WVSLCSHMEQTGVQAVPIVALLSFLIGLVTAYMG 219

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A Q ++FGA++F I+L+ I  LRE+GVLLTA+++AGRSGS+  A+IG+M  NEE+ A+R 
Sbjct: 220 AEQFARFGAQVFVINLLEISTLREMGVLLTALVVAGRSGSSFTAQIGAMVANEEVSAMRA 279

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +GLD + +L+ PR+ AL++ LP+L  +A+   I+G  +  W    I  A F +RFH    
Sbjct: 280 LGLDPIEVLVVPRVLALVVMLPILAFIADIMGILGGGVAAWGTLGIDPANFTARFHEIVQ 339

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L N   G+IKAPF A  I +V   +GF V   + S+G+  T  VV++I +VI++++LFAI
Sbjct: 340 LRNFVVGMIKAPFFALVIALVGCFQGFRVTGSAESVGRLTTQAVVEAIFMVIVLNALFAI 399

Query: 367 FYFAIGI 373
            + ++G+
Sbjct: 400 LFTSLGV 406


>gi|325293034|ref|YP_004278898.1| ABC transporter transmembrane protein [Agrobacterium sp. H13-3]
 gi|325060887|gb|ADY64578.1| ABC transporter, membrane spanning protein [Agrobacterium sp.
           H13-3]
          Length = 386

 Score =  288 bits (738), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 163/368 (44%), Positives = 223/368 (60%), Gaps = 6/368 (1%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            G   +  +G+W++  +S I   +   I KS  +    +DLS++  IDT GA +I    E
Sbjct: 23  GGGQRYALSGSWRNSNLSGIFARLEN-IEKSGPAGPVEIDLSSVEAIDTTGAWVIRRLRE 81

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
               K     ++   E++  LI     K     +P         +     IG+ +V+   
Sbjct: 82  DMEAKGVTVTLT-GNERIEDLIGQLPDKAAMEGEP--VAKVGLAERFFSPIGQAVVQNGA 138

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
           D  +  +ILG  +                  +++ Q+ ++GV  VP+++L+SF+ GA+IA
Sbjct: 139 DFLAGMYILGSAVRGAQMKLGRGR--GVSPAAIVNQIDHMGVRAVPIIMLMSFLIGAIIA 196

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           QQGAFQL  FGAE+F +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EEIDA
Sbjct: 197 QQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREEIDA 256

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           ++ +GL+ V +L+ PR+ AL I+LPLLTILANF+A+ GA+IV   Y  I F VF SR H 
Sbjct: 257 LKVIGLNPVGVLVFPRLVALTIALPLLTILANFAALFGAAIVTLLYSGITFEVFLSRLHG 316

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
               + I  G+IKAPFMA  IGIVA  EG  VG  + SLGK VT+ VV+SI +VI++D L
Sbjct: 317 AVEESTIAAGMIKAPFMALIIGIVAAVEGMKVGGSAESLGKHVTSSVVKSIFVVILVDGL 376

Query: 364 FAIFYFAI 371
           FAIFY AI
Sbjct: 377 FAIFYAAI 384


>gi|254779978|ref|YP_003058085.1| ABC-type transport system, permease; putative membrane protein
           [Helicobacter pylori B38]
 gi|254001891|emb|CAX30141.1| ABC-type transport system, permease; putative membrane protein
           [Helicobacter pylori B38]
          Length = 377

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 180/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +          +D S   ++D +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGPLKMDFSGCQKVDFVFGMFLFDLI 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      +I     K+   +  +    Y   + L   +GK IV+  
Sbjct: 72  KERSLNIELCNVSENNACALKVIKDWLEKEEDLESKKAGKHY---ELLITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QG  QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGTLQLQDMGAPLVSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  RFH
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRFH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 IFSIVFSKLNI 377


>gi|116051201|ref|YP_789968.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|218890596|ref|YP_002439460.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254236173|ref|ZP_04929496.1| hypothetical protein PACG_02138 [Pseudomonas aeruginosa C3719]
 gi|254241899|ref|ZP_04935221.1| hypothetical protein PA2G_02620 [Pseudomonas aeruginosa 2192]
 gi|115586422|gb|ABJ12437.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126168104|gb|EAZ53615.1| hypothetical protein PACG_02138 [Pseudomonas aeruginosa C3719]
 gi|126195277|gb|EAZ59340.1| hypothetical protein PA2G_02620 [Pseudomonas aeruginosa 2192]
 gi|218770819|emb|CAW26584.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
          Length = 381

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 114/364 (31%), Positives = 186/364 (51%), Gaps = 4/364 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R  G+W     + +  +V     +S  + +A  DLS +  +DT GA L+   +      
Sbjct: 21  VRAIGDWTLAHYTALEREVTRL--RSEVAGNASFDLSQLGALDTAGAALLAELLGAERLA 78

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
              +       +  +L+           +P++     +   L   IG  +  F     + 
Sbjct: 79  DLAELEPGLPRERQALLKTVGHALHDFCEPEKPKPPTTAIELLARIGCAMETFWLHLKAL 138

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +GL +            ++  +  L+  +   G+  VP++ L++F+ GAVIA  GA 
Sbjct: 139 LGFIGLTLETLFRSLVRPASWR--VTPLVANIEKSGLDAVPIIALLTFLVGAVIAFLGAT 196

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L+ FGA I++++L+    LRE  VLLTA+++AGR+ SA  A+IGSMK NEEIDAIR +G
Sbjct: 197 VLANFGATIYTVNLVVFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRALG 256

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           L+ + +L+ PR+ AL++SLP+LT +     I+G   V     DIP A+F S       + 
Sbjct: 257 LNPIELLVLPRVLALLVSLPMLTFVGMLCGIVGGMTVCAWTLDIPPAMFLSIMEDGIGVQ 316

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   G+ KAP  A  I ++   EGF V   + S+G+  TT VV SI +VI++D+L A+F+
Sbjct: 317 HFLVGISKAPLFAFLIAVIGCLEGFKVSGSAQSVGEHTTTSVVHSIFVVILLDALAALFF 376

Query: 369 FAIG 372
             +G
Sbjct: 377 MEMG 380


>gi|298735565|ref|YP_003728086.1| putative ABC transport system permease protein [Helicobacter pylori
           B8]
 gi|298354750|emb|CBI65622.1| putative ABC transport system permease protein [Helicobacter pylori
           B8]
          Length = 377

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 182/371 (49%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  +D S   ++D +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGSLKMDFSGCQKVDFVFGMFLFDLI 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  +    Y   + L   +GK IV+  
Sbjct: 72  KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKKY---ELLITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QG  QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGVLQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F+ +  RFH
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFSSYIDRFH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 VFSIVFSKLNI 377


>gi|160895814|ref|YP_001561396.1| hypothetical protein Daci_0365 [Delftia acidovorans SPH-1]
 gi|160361398|gb|ABX33011.1| protein of unknown function DUF140 [Delftia acidovorans SPH-1]
          Length = 376

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 95/364 (26%), Positives = 176/364 (48%), Gaps = 11/364 (3%)

Query: 11  FAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
             G+W + E+   A    + A     + D    +L  +  +D +GA+L+      + G+ 
Sbjct: 23  LTGSWGAAELGRRAQWRKLRAQLADAKGDDLGWNLEGLDWLDHVGAQLLW----NHWGRR 78

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
               ++    Q   L       K     P R             +G  ++          
Sbjct: 79  LPARLAASDAQRAMLERVGRFSKEPAPPPPRLNLLERI----DSLGCLVINACGHFAQMT 134

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
            ++G ++ +   F  + +  +G    +   +Y +G + +P+  L+ F+ G V+A   A Q
Sbjct: 135 RLIGQLLIDLLRFARAPH--RGPWRDISGHLYSMGATALPITALVGFLIGVVLAYLMALQ 192

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L QFGAE F ++++ I  +RE+G LL A+++AGR+GSAI A+IG M++ EE+DA++ MG+
Sbjct: 193 LRQFGAESFIVNILGISLIRELGPLLAAILVAGRTGSAITAQIGVMRVTEELDAMQVMGI 252

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
                L+ PR  AL I++PL+++    +A+ G  +       +  A F     +   + N
Sbjct: 253 PHGFRLVLPRALALAIAMPLVSLWTTLAALAGGMLAADLTMGVTGAYFAEALPAAVKIGN 312

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           ++  + K+      I ++    G  V  ++ SLGK  T  VV +I++VI++D++FAI + 
Sbjct: 313 LWIAMGKSVVFGALIALIGCHWGLRVEPNTQSLGKGTTASVVTAITMVIVVDAIFAILFK 372

Query: 370 AIGI 373
            +GI
Sbjct: 373 DVGI 376


>gi|94263506|ref|ZP_01287318.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93456144|gb|EAT06287.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 379

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 97/375 (25%), Positives = 183/375 (48%), Gaps = 17/375 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59
           S +GI      G  ++  I  +  ++   + K+      ++D+  +  +D  G  L++  
Sbjct: 19  SADGILHAVVRGRMEAGSIGPLWQELASKLKKTRAG--LVLDVEKVDYLDMSGQALLLHF 76

Query: 60  -YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
              M+  +  ++++G+      +   I     +    Q+           +    +G+  
Sbjct: 77  SRLMQDSNRPVEVRGLRPDFRHIQEQIDCFDYRPKPLQR---------RLSAVEELGRAA 127

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           V    D       +G  +S+     A     +     ++  M  VG   V ++ L+ F+ 
Sbjct: 128 VNLGRDIGQFFSFVGEFVSSLAYCLAHPGTVR--WKDVLSHMENVGGRAVFIIALMGFLI 185

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G +IA Q A  L  FGAE+F   L+ +  +RE+G L+TA+++AGRSGSA  AEIG+MK N
Sbjct: 186 GVIIAFQTAITLKTFGAEMFVAKLLGLSMVRELGPLVTAIILAGRSGSAFAAEIGTMKTN 245

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEI+A++TMGL+ VR L+ PR+ A ++  PLL +     + IG ++V+    D     + 
Sbjct: 246 EEINALQTMGLNPVRFLVVPRMLATMLVTPLLCVFFLLFSFIGGALVM-LSMDFTLNSYV 304

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
            +  ++  +A+   G++K    +  +  V    G   G  ++++G+  T+ VV +I ++I
Sbjct: 305 HQLSTSVGMADFLGGMVKVLVFSILVAWVGCVRGLQTGSGASAVGRSTTSAVVSAIILII 364

Query: 359 IIDSLFAIFYFAIGI 373
           + D +FA+ Y+ +GI
Sbjct: 365 LADGIFAVVYYMLGI 379


>gi|148560485|ref|YP_001258960.1| putative toulene ABC transporter permease [Brucella ovis ATCC
           25840]
 gi|148371742|gb|ABQ61721.1| putative toulene ABC transporter, permease protein [Brucella ovis
           ATCC 25840]
          Length = 365

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 156/367 (42%), Positives = 225/367 (61%), Gaps = 9/367 (2%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI    ++   
Sbjct: 3   VIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLRQRLAA 61

Query: 68  K---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
           K   ++L+GV      L   +     + +   + +  FF+ +F N+   +G  ++   ND
Sbjct: 62  KHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAVISMFND 118

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                HILG  I   G            + +++ QM  +GV  +P+++L+S + GA+IAQ
Sbjct: 119 FKMAMHILGATIR--GAQLKYGRGNGIPIAAIVTQMDRMGVGAIPIIVLMSTIVGAIIAQ 176

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEI SMK+ EE DA+
Sbjct: 177 QGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEISSMKMREETDAL 236

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F SR H  
Sbjct: 237 TVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISRLHDA 296

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI++D LF
Sbjct: 297 VALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDGLF 356

Query: 365 AIFYFAI 371
           A+FY AI
Sbjct: 357 AMFYAAI 363


>gi|207091861|ref|ZP_03239648.1| hypothetical protein HpylHP_01931 [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 377

 Score =  287 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  +D S   ++D +    +   +
Sbjct: 14  DGADSVLILRGDWDFKTSVFRLDELKKNLLDH--QGSLKMDFSGCQKVDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  +    Y   + L   +GK IV+  
Sbjct: 72  KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKHY---ELLITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 VFSIVFSKLNI 377


>gi|152984282|ref|YP_001347296.1| ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150959440|gb|ABR81465.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7]
          Length = 381

 Score =  287 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 114/364 (31%), Positives = 185/364 (50%), Gaps = 4/364 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R  G+W     + +  +V     +S  +  A  DLS +  +DT GA L+   +      
Sbjct: 21  VRAIGDWTLAHYTALEREVTRL--RSQVAGDASFDLSQLGALDTAGAALLAELLGAERLA 78

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
              +       +  +L+           +P++     +   L   IG  +  F     + 
Sbjct: 79  DLAELEPGLPRERQALLKTVGHALHDFCEPEKPKPPTTAIELLARIGCAMETFWLHLKAL 138

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +GL +            ++  +  L+  +   G+  VP++ L++F+ GAVIA  GA 
Sbjct: 139 LGFIGLTLETLLRSLVRPASWR--VTPLVANIEKSGLDAVPIIALLTFLVGAVIAFLGAT 196

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L+ FGA I++++L+    LRE  VLLTA+++AGR+ SA  A+IGSMK NEEIDAIR +G
Sbjct: 197 VLANFGATIYTVNLVVFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRALG 256

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           L+ + +L+ PR+ AL++SLP+LT +     I+G   V     DIP A+F S       + 
Sbjct: 257 LNPIELLVLPRVLALLVSLPMLTFVGMLCGIVGGMTVCAWSLDIPPAMFLSIMEDGIGVQ 316

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   G+ KAP  A  I ++   EGF V   + S+G+  TT VV SI +VI++D+L A+F+
Sbjct: 317 HFLVGISKAPLFAFLIAVIGCLEGFKVSGSAQSVGEHTTTSVVHSIFVVILLDALAALFF 376

Query: 369 FAIG 372
             +G
Sbjct: 377 MEMG 380


>gi|84516868|ref|ZP_01004226.1| ABC transporter, inner membrane subunit [Loktanella vestfoldensis
           SKA53]
 gi|84509336|gb|EAQ05795.1| ABC transporter, inner membrane subunit [Loktanella vestfoldensis
           SKA53]
          Length = 380

 Score =  287 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 124/373 (33%), Positives = 199/373 (53%), Gaps = 13/373 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++        G         +  DV+        S + +VD++ ++ +DT GA  ++   
Sbjct: 19  DSDGARLSVQGRLTIDSFEHLDRDVI----AQQASRAEVVDIAQLSHMDTAGAWFLLDLA 74

Query: 63  EKYHGKIK--LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
            +        + G S     L   +      K    KP          +    +G+++  
Sbjct: 75  GRTSAGAASVITGASDAQTLLIEAVRTNLPPKAAGAKPAVR-----LVDHFETLGRRVAL 129

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
             + +      LG VI+            +  L S++     VG+  VP+V L++F+ G 
Sbjct: 130 AGSHALEMLSFLGQVIAAMARVIRHPRALR--LTSVVHHCQQVGLQAVPIVALMAFLIGV 187

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A QG+ QL QFGAE+F +DL++I  LRE+G+LLTA+++AGRSGSA  A IGSMK+ EE
Sbjct: 188 VLAFQGSAQLRQFGAEVFVVDLIAISILRELGILLTAIIVAGRSGSAFTAAIGSMKMREE 247

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+RT+GLD V IL+ PR+ AL++ LP L ++AN S + G +++ W   D+  AVF +R
Sbjct: 248 IDAMRTLGLDPVAILVVPRVLALVLMLPALGLIANVSGLFGGALMSWIELDVSPAVFQAR 307

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             S   + +   G+IKAP  A  IGI+   +G  VG  + SLG++ +  VV +I +VI+ 
Sbjct: 308 LVSNTDVWHFNVGMIKAPVFALIIGIIGCYQGMKVGGDAESLGRQTSASVVMAIFMVIVA 367

Query: 361 DSLFAIFYFAIGI 373
           D+LF+IF+  +G+
Sbjct: 368 DALFSIFFAIVGV 380


>gi|208435334|ref|YP_002267000.1| ABC transport system permease [Helicobacter pylori G27]
 gi|208433263|gb|ACI28134.1| ABC transport system permease [Helicobacter pylori G27]
          Length = 377

 Score =  287 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 103/371 (27%), Positives = 181/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  +D S   ++D +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGSLKMDFSGCQKVDFVFGMFLFDLI 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  +    Y   + +   +GK IV+  
Sbjct: 72  KERSLSIELCNVSENNACALKVVKDWLEKEEDLESKKAGKKY---ELMITKLGKSIVETC 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 IFSILFSKLNI 377


>gi|86149247|ref|ZP_01067478.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni CF93-6]
 gi|88596442|ref|ZP_01099679.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 84-25]
 gi|218563235|ref|YP_002345015.1| putative ABC transporter permease [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|85840029|gb|EAQ57287.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni CF93-6]
 gi|88191283|gb|EAQ95255.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 84-25]
 gi|112360942|emb|CAL35743.1| putative ABC transport system permease [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|284926840|gb|ADC29192.1| putative ABC transport system permease [Campylobacter jejuni subsp.
           jejuni IA3902]
 gi|315929480|gb|EFV08676.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           305]
          Length = 369

 Score =  287 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 112/369 (30%), Positives = 185/369 (50%), Gaps = 13/369 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
                G W    I ++     +A+   IQS   I D   +  IDT G    +     ++ 
Sbjct: 11  TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKN 67

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
            + KI  +G+++  + LF L    +++  K +K  ++F           +GK  ++ +  
Sbjct: 68  KNIKITKEGLNSRFQTLFELCEKNYQRLGKTKKSHQNFS-----EYFIDLGKLSLELLKI 122

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                +  G   ++      +   F+   ++ +  +       +P+VIL + + G V+A 
Sbjct: 123 LRKFINFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q A+QL+QFGA IF +DLM I   RE+  L+ A++IAGRS S+  A+IG MKI +EI A+
Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            TMG      ++ PR+ AL++++PL+  +++  +IIG  +V     DI FA F  RF   
Sbjct: 241 NTMGFRSFEFIVIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREA 300

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             + +IF GL KAP     IG++A   GF V   + S+G   T  VV +I  VI  D+LF
Sbjct: 301 VDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF 360

Query: 365 AIFYFAIGI 373
           ++   + GI
Sbjct: 361 SVILTSTGI 369


>gi|57238657|ref|YP_179788.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           RM1221]
 gi|57167461|gb|AAW36240.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           RM1221]
 gi|315059096|gb|ADT73425.1| Putative ABC transport system permease protein [Campylobacter
           jejuni subsp. jejuni S3]
          Length = 369

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 114/369 (30%), Positives = 185/369 (50%), Gaps = 13/369 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
                G W    I ++     +A+   IQS   I D   +  IDT G    +     ++ 
Sbjct: 11  TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKD 67

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
            + KI  +G+++  + LF L    +++  K +K  ++F           +GK  ++ +  
Sbjct: 68  KNIKITKEGLNSRFQTLFELCEKNYQRLSKTKKSHKNFS-----EYFIDLGKLSLELLKI 122

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                +  G   ++      +   F+   ++ +  +       +P+VIL + + G V+A 
Sbjct: 123 LRKFINFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q A+QL+QFGA IF +DLM I   RE+  L+ A++IAGRS S+  A+IG MKI +EI A+
Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            TMG      +I PR+ ALI+++PL+  +++  +IIG  +V     DI FA F  RF   
Sbjct: 241 NTMGFRSFEFIIIPRVMALIVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREA 300

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             + +IF GL KAP     IG++A   GF V   + S+G   T  VV +I  VI  D+LF
Sbjct: 301 VDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF 360

Query: 365 AIFYFAIGI 373
           ++   + GI
Sbjct: 361 SVVLTSAGI 369


>gi|86152328|ref|ZP_01070539.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 260.94]
 gi|121613751|ref|YP_001001289.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 81-176]
 gi|167006183|ref|ZP_02271941.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 81-176]
 gi|315125046|ref|YP_004067050.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni ICDCCJ07001]
 gi|85840817|gb|EAQ58068.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 260.94]
 gi|87249848|gb|EAQ72807.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 81-176]
 gi|315018768|gb|ADT66861.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni ICDCCJ07001]
          Length = 369

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 113/369 (30%), Positives = 185/369 (50%), Gaps = 13/369 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
                G W    I ++     +A+   IQS   I D   +  IDT G    +     ++ 
Sbjct: 11  TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKD 67

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
            + KI  +G+++  + LF L    +++  K +K  ++F           +GK  ++ +  
Sbjct: 68  KNIKITKEGLNSSFQTLFELCEKNYQRLSKTKKSHKNFS-----EYFIDLGKLSLELLKI 122

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                +  G   ++      +   F+   ++ +  +       +P+VIL + + G V+A 
Sbjct: 123 LRKFINFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q A+QL+QFGA IF +DLM I   RE+  L+ A++IAGRS S+  A+IG MKI +EI A+
Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            TMG      +I PR+ AL++++PL+  +++  +IIG  +V     DI FA F  RF   
Sbjct: 241 NTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREA 300

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             + +IF GL KAP     IG++A   GF V   + S+G   T  VV +I  VI  D+LF
Sbjct: 301 VDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF 360

Query: 365 AIFYFAIGI 373
           ++   + GI
Sbjct: 361 SVILTSAGI 369


>gi|238759499|ref|ZP_04620662.1| ABC transporter, permease protein [Yersinia aldovae ATCC 35236]
 gi|238702274|gb|EEP94828.1| ABC transporter, permease protein [Yersinia aldovae ATCC 35236]
          Length = 381

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 121/365 (33%), Positives = 192/365 (52%), Gaps = 6/365 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
               G W       +   V     +     SA+ D S +  +DT GA L+   + +    
Sbjct: 21  VYIRGEWVLAHYRFLEPKVAQL--RVDLPASAMFDFSQLGGLDTAGATLLATLLGELRVS 78

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF-KNLHYHIGKKIVKFINDSCS 127
             L+ ++  +     ++  T  + + N  PQ +     F   L   IG+ +     D  S
Sbjct: 79  -NLRELAPRLPDERRVLLETVSQVLPNLVPQLTVKPQPFWIGLLVPIGQSVDNLWQDFKS 137

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +GL +           +++  + SLI  +  +G++ VP+++L++F+ GAVIA  GA
Sbjct: 138 LLGFVGLTLEALLGTVFRPARWR--VTSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGA 195

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L+ FGA IF++DL+    LRE  VLLTA+++AGR+ SA  AEIG MK NEEIDAI+T+
Sbjct: 196 TVLTTFGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTL 255

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GL+ V +L+ PR+ AL+ISLP+LT +     I G  +V     DI   +F +   ++  L
Sbjct: 256 GLNPVELLVLPRVLALLISLPMLTFIGMICGIFGGMVVCALALDISPTMFLTIMQNSNGL 315

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            ++  G+ KAP  A  I I+   EGF V   + S+G   TT VV SI +VI++D++ A+F
Sbjct: 316 QHLLVGISKAPIFAFLIAIIGCLEGFKVSGSAESVGMHTTTSVVHSIFVVILLDAVAALF 375

Query: 368 YFAIG 372
           +  +G
Sbjct: 376 FMEMG 380


>gi|222148407|ref|YP_002549364.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
 gi|221735395|gb|ACM36358.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
          Length = 376

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 149/373 (39%), Positives = 226/373 (60%), Gaps = 11/373 (2%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           +        R +G+W++  +  +   ++    +   +    +D++ I+ +DT GA +I  
Sbjct: 11  LEGEAGQRLRLSGSWRNTTVDTVIPKLLEL--RETLNGHVEIDITGISSLDTSGAWIIRR 68

Query: 61  --FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
                   G +++ G S  + +L S +      +      +       F+ +   +GK  
Sbjct: 69  IELAASKQGDVQIVGGSDAMRELISAL-----PEQPPLPEKVVDRRPFFQRVLEPVGKMS 123

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           V    D  + +++LG  +  T          +  + S++ Q+ ++G+  VP+++L+SF+ 
Sbjct: 124 VSLFEDVLAMSYVLGSAVRGTQS--KERRGGRASIASIVNQLDHMGLRAVPIILLMSFLI 181

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQGAFQL  FGAE+F +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ 
Sbjct: 182 GAIIAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMR 241

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE+DA++ +GL+ + +L+ PRI AL+I+LPLLT++ANF+A+ GA++V + Y  I F VF 
Sbjct: 242 EEVDALKVIGLNPIGVLVLPRIVALVIALPLLTVIANFAALYGAAVVSFAYSGITFQVFV 301

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +R H     A    GLIKAPFMA  IGIVA  EG  VG  + SLG+ VT  VV+SI +VI
Sbjct: 302 TRLHDAVDYATFAAGLIKAPFMAVVIGIVAAVEGMKVGGSAESLGQHVTASVVKSIFVVI 361

Query: 359 IIDSLFAIFYFAI 371
           ++D LFA+FY AI
Sbjct: 362 LMDGLFAVFYAAI 374


>gi|296445994|ref|ZP_06887944.1| protein of unknown function DUF140 [Methylosinus trichosporium
           OB3b]
 gi|296256512|gb|EFH03589.1| protein of unknown function DUF140 [Methylosinus trichosporium
           OB3b]
          Length = 382

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 135/373 (36%), Positives = 212/373 (56%), Gaps = 12/373 (3%)

Query: 3   ENGITV-FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            +G  V F  AG+W      +I       +     +  A+VDL  ++ +DT GA +I   
Sbjct: 16  RDGAAVSFALAGDWVLAAAMDIERAAEKMVADGRGATRAVVDLVHVSRLDTAGAWVIGRA 75

Query: 62  M---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
           +    +   +  ++G     E L     F  R+   + +P+ S       ++   +G+ +
Sbjct: 76  LDELARAGVEASVEGARPEHELLLREAHF--RRFETDSRPRSSLCI----DILADLGRSV 129

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           V    D+ + A  LG  ++ TG   A + +F+    S +  +   G+  VP++ LI+ + 
Sbjct: 130 VTAGRDAFAGAVFLGEFVAVTGRAVAIARRFR--FTSFVYHLENFGLRSVPIIALINLLV 187

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA++AQQG FQL +FGA  +++DL+ +L LRE+GVLL+++MIAGRSGSAI AE+GSMK+ 
Sbjct: 188 GAIVAQQGIFQLRRFGASTYAVDLIGVLVLRELGVLLSSIMIAGRSGSAITAELGSMKMR 247

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+R MGL  +  L++PRI AL++++PLL  +A+ SA+ G  +V W Y  I    + 
Sbjct: 248 EEIDALRVMGLSPMDALVTPRILALVVAMPLLAFIADMSALFGGLLVCWGYEGISPVAYL 307

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
               +         G+IKAPFMA  IGIV+  EG +    + SLG+ VT  VV+SI +VI
Sbjct: 308 EWLQAAIGRNTFMVGIIKAPFMAFTIGIVSAMEGMSTKGSAESLGRHVTAAVVKSIFMVI 367

Query: 359 IIDSLFAIFYFAI 371
           ++D LFAIF+ +I
Sbjct: 368 VLDGLFAIFFASI 380


>gi|317013234|gb|ADU83842.1| putative ABC transport system permease protein [Helicobacter pylori
           Lithuania75]
          Length = 377

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 103/371 (27%), Positives = 180/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  +D S   ++D +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGSLKMDFSGCQKVDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            +    I+L  VS +      ++     K+   +  +    Y   + L   +GK IV+  
Sbjct: 72  RERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKHY---ELLITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 STFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 VFSIVFSKLNI 377


>gi|319791003|ref|YP_004152643.1| hypothetical protein Varpa_0310 [Variovorax paradoxus EPS]
 gi|315593466|gb|ADU34532.1| protein of unknown function DUF140 [Variovorax paradoxus EPS]
          Length = 388

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 92/374 (24%), Positives = 185/374 (49%), Gaps = 15/374 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEI--ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
            + G       G W +  +S +     +  ++  +  +D    DL  I ++D IGA+L+ 
Sbjct: 24  EQEGRQWTVATGRWTALGMSSLPAWQALSKSLAAAPPADDRAWDLRPIEQLDHIGAQLLW 83

Query: 60  -YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++  ++   ++++       Q  +++    +  +           +  +   ++  + +
Sbjct: 84  EHWRHEWPATLEME------AQHKAVLDQVAQYTVATPVEPPKTLADRIRTFSHNGPRAM 137

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           V     +     ++G +  + G    + +  +         +Y  G + + +  L+  + 
Sbjct: 138 VV----ARDFIGLIGQLAIDVGTLIRAPH--RAPWRDFSGHLYQFGATALHITALVGLLI 191

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G V+A   + QL  +GAE F ++++ +  +RE+G +L AV+IAGRSGSAI A+IG M++ 
Sbjct: 192 GVVLAYLISQQLRNYGAEAFVVNILGLSLVRELGPVLAAVLIAGRSGSAITAQIGVMRVT 251

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE+DA+R MG+     L+ PR+ AL I++PL+++  + +A++G  +      DI  A F 
Sbjct: 252 EELDAMRVMGIPHGFRLVMPRVLALAIAMPLISLWTSMAALLGGMLAADAALDISPAYFL 311

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           S       +AN++  + K+      I ++    G  V  ++ SLG+  T+ VV SI+ VI
Sbjct: 312 SALPRAVPIANLWLAMAKSAVFGILIALIGCYFGMKVKPNTESLGRGTTSSVVTSITAVI 371

Query: 359 IIDSLFAIFYFAIG 372
           ++D+LFA+ +  IG
Sbjct: 372 LVDALFAVLFKGIG 385


>gi|152980330|ref|YP_001354931.1| ABC transport system permease protein [Janthinobacterium sp.
           Marseille]
 gi|151280407|gb|ABR88817.1| ABC transport system permease protein [Janthinobacterium sp.
           Marseille]
          Length = 374

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 99/363 (27%), Positives = 176/363 (48%), Gaps = 13/363 (3%)

Query: 12  AGNWKSPEI--SEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           AG+W+   +      D +   +    + D    DLS I  +D IGA+L+     K     
Sbjct: 22  AGSWQVRALIDPGAMDKLTATLRGVRKVDETRWDLSGIEALDYIGAQLLWNAWGKKRPPQ 81

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
               ++   E  F  +  T   ++K     R + ++++           ++  +      
Sbjct: 82  LT--LAPQHESFFQRLEQTGTLQVKRPPQHRWYTFSAYLQFK-------LRMADHMLGFI 132

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
            ++G ++ + G F       +G    +   +++ G   + +  L+ F+ G V++   A Q
Sbjct: 133 TLIGQLVMDMGRFIRQPQ--RGPWKEISANIFHTGYQALGITALVGFLIGVVLSYLSAQQ 190

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L QFG +IF ++++ +  +RE+G LL A+++AGRSGS+I A++G M++ EE+DA+  MGL
Sbjct: 191 LHQFGGDIFLVNILGMSVIRELGPLLAAILVAGRSGSSITAQLGVMRVTEELDAMLVMGL 250

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
                LI P++ AL IS+PLL +  +  A+IG          + F  F         LAN
Sbjct: 251 PHGYRLIMPKVIALAISMPLLVVWTDAMALIGGMAAANVELGLSFKYFLRELPDAVPLAN 310

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
            + GL K       I +VA   G  +  ++ SLG+  T  VV +I++VI+ D++FAI + 
Sbjct: 311 YWIGLGKGVVFGSLIALVACHFGLRIKPNTESLGEGTTISVVTAITVVILADAVFAIVFS 370

Query: 370 AIG 372
            +G
Sbjct: 371 GVG 373


>gi|283953736|ref|ZP_06371267.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 414]
 gi|283794777|gb|EFC33515.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 414]
          Length = 369

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 111/364 (30%), Positives = 186/364 (51%), Gaps = 13/364 (3%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEKYHGKI 69
           G W    I ++     + +   IQS   I D   + +IDT G    +     ++  + KI
Sbjct: 16  GIWDKASIYKLKIKDFLTL---IQSKEVIFDFKDLEKIDTAGVRFFLALENDLKNKNIKI 72

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
             QG+++    LF L    +++  K +K  ++F          ++GK  ++ +       
Sbjct: 73  TKQGLNSRFLTLFELCEKNYQRLNKTKKSHKNFS-----EYFINLGKLSLELLKILREFI 127

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
           +  G   ++      +   F+  L++ +  +       +P+VIL + + G V+A Q A+Q
Sbjct: 128 NFTGAFFTSLFLCLKNPKNFR--LIAFLYHIENSAFKALPIVILTALLVGVVLAYQAAYQ 185

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L+QFGA IF +DLM I   RE+  L+ A++IAGRS S+  A+IG MKI +EI A+ TMG 
Sbjct: 186 LAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAMNTMGF 245

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
                +I PR+ AL++++PL+  +++  +I+G  ++     DI FA F  RF     + +
Sbjct: 246 RSFEFIIIPRVMALVVAMPLIVAISDAISIVGGMMIAKLNLDISFAEFLRRFREAVDIKH 305

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           I  GL+KAP     IG++A   GF V   + S+G   T  VV +I  VI  D+LF++   
Sbjct: 306 ILIGLVKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALFSVVLT 365

Query: 370 AIGI 373
           + GI
Sbjct: 366 SAGI 369


>gi|260219765|emb|CBA26623.1| hypothetical protein Csp_H39530 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 387

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 94/370 (25%), Positives = 191/370 (51%), Gaps = 21/370 (5%)

Query: 11  FAGNWKSPEISEIADDVVMAINKSIQ------SDSAIVDLSAITEIDTIGAELIM-YFME 63
             G W +  +S  A  V   + K++Q      + +   DL     ID  GA+++   +  
Sbjct: 32  LRGRWTADALS--AKHVWQPLEKALQGVPGNGAPAVAWDLREAQRIDHTGAQVLWNAWGR 89

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           ++  K++ + +        +L+    +  +     +R  ++     L   +G+K+ +  +
Sbjct: 90  QWPAKLQAEPLQ------KALLDRVAKFTVPTPPVERLDWH----ALLVSLGRKLARVES 139

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                  ++G ++ +  +      +  G    +   +Y +G + +P+  L+ F+ G V+A
Sbjct: 140 HLGGMVRLIGQLMLDVLQLLRHPLQ--GPWRDVSGHLYRIGATALPITALVGFLIGVVLA 197

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
              + QL Q+GA+ F ++++ +  +RE+G +L A+++AGRSGSAI A+IG M++ EE+DA
Sbjct: 198 YLMSKQLRQYGADSFIVNILGMSLIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELDA 257

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R MG+     L+ PR  A+ I++PL+ +    +A++G  +       +  A FF+    
Sbjct: 258 MRVMGIPKGFRLVMPRTLAMAIAMPLVAVWTTMAALLGGMLASDLSMGLTPAYFFTALPK 317

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
           T  ++N++  L+K+      I ++A   G  V   + SLG+  T  VV SI++VI++D+L
Sbjct: 318 TVEISNLWLSLVKSCVFGVLISLLACHHGLRVKPDTQSLGEGTTASVVSSITMVILVDAL 377

Query: 364 FAIFYFAIGI 373
           FA+ + ++G+
Sbjct: 378 FAVIFKSVGL 387


>gi|221639257|ref|YP_002525519.1| ABC transporter inner membrane subunit [Rhodobacter sphaeroides
           KD131]
 gi|221160038|gb|ACM01018.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides
           KD131]
          Length = 356

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 109/366 (29%), Positives = 194/366 (53%), Gaps = 15/366 (4%)

Query: 11  FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK-- 68
             G      + E    +              +D++A+  +DT GA  I+   ++      
Sbjct: 3   LRGRLTIETLPETQRSLGSV------GAGGQIDMAAVEALDTAGAWAILQAQKRAEAAGQ 56

Query: 69  -IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
            +++  +S     L   ++      +   + +R        +   ++G+++ + +  S +
Sbjct: 57  ALEIVNLSESHRHLLETVAA----AMPEPERRRRTIPGRPDDGLANLGQEVAQGLRGSLT 112

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
                G V+++ G       + K  L  L+  M   G + VP+V L+ F+ G V+A QG+
Sbjct: 113 SVGFFGEVVAHLGALVLHPTRLK--LTPLVHHMQEAGWNAVPIVSLMGFLIGIVLAFQGS 170

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGAE++ +DL++I  LRE+G+LLTA+++AGRS SA  A IGSMK+ EEIDA+R +
Sbjct: 171 TQLKSFGAEVYVVDLVAISILRELGILLTAIIVAGRSASAFTAAIGSMKMREEIDAMRVL 230

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GLD +  L+ PR+ AL+I LP L  +A+ + ++G  ++ W    I   +F ++  +   +
Sbjct: 231 GLDPIDRLVLPRLIALVILLPALGFIASLAGLVGGGLMAWIDLGITPGMFRTQLLADTDV 290

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           ++   GL+KAPF A  I ++   +G  V  ++ SLG   +  VVQ+I +VI++D+LF+IF
Sbjct: 291 SHAIIGLVKAPFFAVIIAVIGCHQGMQVSGNAESLGSHTSRSVVQAIFLVIVVDALFSIF 350

Query: 368 YFAIGI 373
           +   G+
Sbjct: 351 FAVWGL 356


>gi|157415866|ref|YP_001483122.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 81116]
 gi|157386830|gb|ABV53145.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 81116]
 gi|307748503|gb|ADN91773.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni M1]
 gi|315931385|gb|EFV10354.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           327]
          Length = 369

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 113/369 (30%), Positives = 185/369 (50%), Gaps = 13/369 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
                G W    I ++     +A+   IQS   I D   +  IDT G    +     ++ 
Sbjct: 11  TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKD 67

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
            + KI  +G+++  + LF L    +++  K +K  ++F           +GK  ++ +  
Sbjct: 68  KNIKITKEGLNSRFQTLFELCEKNYQRLSKTKKSHKNFS-----EYFIDLGKLSLELLKI 122

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                +  G   ++      +   F+   ++ +  +       +P+VIL + + G V+A 
Sbjct: 123 LIKFTNFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q A+QL+QFGA IF +DLM I   RE+  L+ A++IAGRS S+  A+IG MKI +EI A+
Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            TMG      +I PR+ AL++++PL+  +++  +IIG  +V     DI FA F  RF   
Sbjct: 241 NTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREA 300

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             + +IF GL KAP     IG++A   GF V   + S+G   T  VV +I  VI  D+LF
Sbjct: 301 VDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF 360

Query: 365 AIFYFAIGI 373
           ++   + GI
Sbjct: 361 SVVLTSAGI 369


>gi|94263144|ref|ZP_01286962.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93456515|gb|EAT06629.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 379

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 98/375 (26%), Positives = 183/375 (48%), Gaps = 17/375 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59
           S +GI      G  ++  I  +  ++   + K+      ++D+  +  +D  G  L++  
Sbjct: 19  SADGILHAVVRGRMEAGSIGPLWQELASKLKKTRAG--LVLDVEKVDYLDMSGQALLLHF 76

Query: 60  -YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
              M+  +  ++++G+      +   IS         Q+           +    +G+  
Sbjct: 77  SRLMQDGNLPVEIRGLHPDFRHIQEQISRFDCHSKPAQR---------RLSAVEELGRAA 127

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           V    D       +G  +S+     A     +     ++  M  VG   V ++ L+ F+ 
Sbjct: 128 VNLGRDIGQFFSFVGEFVSSLAYCLAHPGTVR--WKDVLSHMENVGGRAVFIIALMGFLI 185

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G +IA Q A  L  FGAE+F   L+ +  +RE+G L+TA+++AGRSGSA  AEIG+MK N
Sbjct: 186 GVIIAFQTAITLKTFGAEMFVAKLLGLSMVRELGPLVTAIILAGRSGSAFAAEIGTMKTN 245

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEI+A++TMGL+ VR L+ PR+ A ++  PLL +     + IG ++V+    D     + 
Sbjct: 246 EEINALQTMGLNPVRFLVVPRMLATMLVTPLLCVFFLLFSFIGGALVM-LSMDFTLNSYV 304

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
            +  ++  +A+   G++K    +  +  V    G   G  ++++G+  T+ VV +I ++I
Sbjct: 305 HQLSTSVGMADFLGGMVKVLVFSILVAWVGCVRGLQTGSGASAVGRSTTSAVVSAIILII 364

Query: 359 IIDSLFAIFYFAIGI 373
           + D +FA+ Y+ +GI
Sbjct: 365 LADGIFAVVYYMLGI 379


>gi|264676422|ref|YP_003276328.1| inner membrane ABC-transporter component [Comamonas testosteroni
           CNB-2]
 gi|299533747|ref|ZP_07047119.1| putative ABC transporter, permease protein [Comamonas testosteroni
           S44]
 gi|262206934|gb|ACY31032.1| putative inner membrane ABC-transporter component [Comamonas
           testosteroni CNB-2]
 gi|298718296|gb|EFI59281.1| putative ABC transporter, permease protein [Comamonas testosteroni
           S44]
          Length = 375

 Score =  285 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 103/371 (27%), Positives = 176/371 (47%), Gaps = 10/371 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S  G      AG W + E+ +      +A         A  DL  +   D IGA+L+   
Sbjct: 14  SREGQQWAVPAGRWSAAELGDRHIWRRLAPQIRAVPKGAAWDLQQMVWFDHIGAQLLWE- 72

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
                GK     + T   Q   L       ++   KP+ S +      L    G+ ++  
Sbjct: 73  ---QWGKAWPAQLLTTKTQRSMLERVARFSEVPESKPEPSGWMCEVNRL----GQMVIDA 125

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                +   ++G ++ +      +    +G    +   +Y  G + +P+  L+ F+ G V
Sbjct: 126 CGHFSNLIQLVGQLLLDCLRLLRNP--LRGPWRDISGHLYATGATALPITALVGFLIGVV 183

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A   A QL QFGAE F ++++ I  +RE+G LL A+++AGRSGSAI A+IG M++ EE+
Sbjct: 184 LAYLMALQLRQFGAESFIVNILGISLIRELGPLLAAILVAGRSGSAITAQIGVMRVTEEL 243

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA++ MG+     L+ PR  AL +S+PL+ +    +A+ G  +      DI  + F    
Sbjct: 244 DAMQVMGISQGYRLVLPRALALAVSMPLVALWTILAALAGGMVAADLTMDITPSYFVQSL 303

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            +   + N+   + K+      I ++    G  V  ++ SLG+  T  VV SI++VII+D
Sbjct: 304 PAAVKVGNLVLAMGKSVVFGVLIALIGCHWGLKVEPNTQSLGRGTTAAVVSSITMVIIVD 363

Query: 362 SLFAIFYFAIG 372
           ++FAI +  +G
Sbjct: 364 AIFAILFRNVG 374


>gi|222823161|ref|YP_002574734.1| ABC transporter permease (DUF140 domain protein) [Campylobacter
           lari RM2100]
 gi|222538382|gb|ACM63483.1| putative ABC transporter, permease protein (DUF140 domain protein)
           [Campylobacter lari RM2100]
          Length = 370

 Score =  285 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 108/372 (29%), Positives = 187/372 (50%), Gaps = 16/372 (4%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF-- 61
           N   +F   G W    + ++               + I D + +  IDT G    +    
Sbjct: 11  NHECIFSVFGIWDKTSVGKLEKLDF------PTQKNIIFDFTNLDFIDTAGIRYFLALEN 64

Query: 62  -MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
            +++   ++    + +   +LF L    ++    + + +++      K+   ++GKK+V+
Sbjct: 65  ELKQKGFELSRVNLKSEHAKLFELCQKHYKSFCDSYEDKKT-----IKDFFENLGKKVVE 119

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
                    + +GL+I+          K +    + +  +    ++ +P+++L S + G 
Sbjct: 120 SFTLLVQFLNFIGLIIATCFNTLFHLKKLR--FRAFLYHVENSAINALPIIMLTSLLVGV 177

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A Q A+QL+QFGA I+ +DLM I   RE+  L++A++IAGRS S+  A+IG MK+ +E
Sbjct: 178 VLAYQAAYQLAQFGANIYIVDLMGISATRELAPLISAIVIAGRSASSYTAQIGVMKLTDE 237

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA++TMG      +I PR+ AL +++PL+ I+A+  +IIG  IV W   +I  + F SR
Sbjct: 238 IDAMKTMGFKESEFIILPRVLALALAMPLVVIVADILSIIGGIIVAWFSLEISASEFMSR 297

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
           F     L +I  GLIKAP     I  +A   GF V   + S+G   T  VV +I  VI  
Sbjct: 298 FKEAVELKHIIIGLIKAPIFGFLIASIACFRGFFVQKTTESIGVYTTKSVVNAIFWVIAF 357

Query: 361 DSLFAIFYFAIG 372
           D++F++F    G
Sbjct: 358 DAIFSVFLTKAG 369


>gi|154706662|ref|YP_001424136.1| ABC transporter permease protein [Coxiella burnetii Dugway
           5J108-111]
 gi|154355948|gb|ABS77410.1| ABC transporter permease protein [Coxiella burnetii Dugway
           5J108-111]
          Length = 377

 Score =  285 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 114/364 (31%), Positives = 189/364 (51%), Gaps = 13/364 (3%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAEL---IMYFMEKYHGKI 69
           G+W    +S + D + +   K   S+  I+    IT++D+ GA L   ++  ++     I
Sbjct: 24  GDWTVSHLSPLEDQLPLCAEKL--SEKVIIHADKITKMDSAGALLFYTLINHLKSLGKAI 81

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
           ++ G+S + + L  LI    +   +     ++        + Y +G+  V          
Sbjct: 82  EITGLSENAQSLLKLIGNESKFLRQPLPSSKTP------GVVYLLGEWAVTKWRVLIDFL 135

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
             +G V +  G+        +    +++R +   G   +P+V L+SF+ G V+  Q A Q
Sbjct: 136 TFVGEVATTAGQGILKPQ--RIQWRAILRAIEETGYQALPIVALLSFLVGVVLTYQIALQ 193

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L  + A+IF +D+     LRE G L+TA++ AGR+ +A  A+IG+MK+NEEIDA+ TMG+
Sbjct: 194 LDSYNADIFVVDITGAAILREFGPLITAIIAAGRTSTAFTAQIGTMKVNEEIDALNTMGV 253

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
             +  L+ P+I ALIISL LLT+ A+     G+ I+     DI +  F  RFH    + +
Sbjct: 254 VPIEHLVLPKIIALIISLTLLTVWADIFGTFGSMIMAKSQLDIGYLAFLDRFHHAIAVRH 313

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              GLIKAP     I  V   +GF VG  ++S+G+K T   VQSI ++II D++F++ + 
Sbjct: 314 YIAGLIKAPVFGLIIATVGCFQGFQVGASADSVGQKTTQSAVQSIFLIIIADAIFSVIFS 373

Query: 370 AIGI 373
             GI
Sbjct: 374 LRGI 377


>gi|94309017|ref|YP_582227.1| hypothetical protein Rmet_0072 [Cupriavidus metallidurans CH34]
 gi|93352869|gb|ABF06958.1| ABC transporter, inner membrane subunit [Cupriavidus metallidurans
           CH34]
          Length = 376

 Score =  285 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 105/368 (28%), Positives = 176/368 (47%), Gaps = 14/368 (3%)

Query: 9   FRFAGNWKSPEIS---EIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
            +  G W +  ++   E           S     A   L  IT +D IGA+LI      +
Sbjct: 20  VQLQGEWTAVALAGCHEARGLRAQLHELSEAPRHAEWSLDGITRLDHIGAQLIWQAWNGH 79

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
                   ++   +++F+ I+    +  K    +R        N    +G  ++ F+   
Sbjct: 80  MPD--NVSLNDGQKRVFARIAGLRTEGWKKHMVERF-------NPVTIVGASVLSFLAQL 130

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                +LG ++ +   F  +    +G    +   +Y VG   + +  L++F+ G V++  
Sbjct: 131 GVGVTMLGQLVFDLLRFLRAPQ--RGPWREISANIYNVGYKALGITALVAFLIGIVLSYL 188

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            A QL  FGA  F ++++ +  +RE+G +L A++IAGRSGSAI A+IG M++ EE+DA+ 
Sbjct: 189 SANQLRIFGASTFIVNILGMAVIRELGPVLAAILIAGRSGSAITAQIGVMRVTEELDAMS 248

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MG+     L+ PR+ AL IS+PLL    +  A+ G  +      DI +  F  +     
Sbjct: 249 VMGISHGFRLVMPRVIALAISMPLLVAWTDLLALFGGMVAARLQLDISYVYFLRQLPDAV 308

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            +AN++ GL K       I + A   G  V  ++ SLG+  T  VV SI++VII D++FA
Sbjct: 309 PVANLWFGLCKGVVFGMLIALTACHFGLRVKPNTQSLGQGTTASVVTSITVVIIADAVFA 368

Query: 366 IFYFAIGI 373
           I +  IGI
Sbjct: 369 ILFKDIGI 376


>gi|328543112|ref|YP_004303221.1| ABC transporter permease protein [Polymorphum gilvum SL003B-26A1]
 gi|326412858|gb|ADZ69921.1| ABC transporter permease protein [Polymorphum gilvum SL003B-26A1]
          Length = 381

 Score =  285 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 131/374 (35%), Positives = 209/374 (55%), Gaps = 12/374 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +        +G+W       +  +  + +  +    +  +DLS I+ +DT GA L+    
Sbjct: 17  DGDRLAVALSGDWTIHT--AMDAEAALGVIDTSDVGTVRIDLSGISVLDTSGAWLLHRMR 74

Query: 63  EK---YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
            +      ++ L GV+   E L S +   H      ++     +  S  ++    G+ +V
Sbjct: 75  GRIEFAGVRVILTGVAPKYELLLSEVDAHHPPPWSPER-----YRYSIVSVLETTGRHVV 129

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
               D  +  HILG +            + +G  +S+  Q     +  VP++ L+SF+ G
Sbjct: 130 DAGKDLVAMMHILGSLSVVVAGVLFRPGRLRG--ISIAVQFDKSCIGAVPIIALMSFLIG 187

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           A+IAQQG F L QFGA++F +DL  +L LREIGVLLTA+M+AGRSGSA  AE+GSMK+ E
Sbjct: 188 AIIAQQGGFYLRQFGADLFVVDLAGVLVLREIGVLLTAIMVAGRSGSAFTAELGSMKMQE 247

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDA+  +GL    +LI PR+ AL++++P+LT +++ +A+ G+ +V W Y  IP A + +
Sbjct: 248 EIDALHVIGLSVTEVLILPRLLALMVAMPVLTFVSDIAALFGSGLVTWSYLGIPPAAYMA 307

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           R     +      G++KAPFMA  IG++A  EG  VG  ++SLG+  T  VV++I +VI+
Sbjct: 308 RLEEAISFQTFLVGMVKAPFMALIIGLIACVEGLKVGGSADSLGRHTTMSVVKAIFLVIV 367

Query: 360 IDSLFAIFYFAIGI 373
           +D LFAIF+ AI +
Sbjct: 368 VDGLFAIFFAAIDV 381


>gi|217031805|ref|ZP_03437308.1| hypothetical protein HPB128_199g13 [Helicobacter pylori B128]
 gi|216946457|gb|EEC25059.1| hypothetical protein HPB128_199g13 [Helicobacter pylori B128]
          Length = 367

 Score =  285 bits (730), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 182/371 (49%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  +D S   ++D +    +   +
Sbjct: 4   DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGSLKMDFSGCQKVDFVFGMFLFDLI 61

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  +    Y   + L   +GK IV+  
Sbjct: 62  KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKKY---ELLITKLGKSIVETY 118

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 119 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 176

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QG  QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 177 ALQGVLQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 236

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F+ +  RFH
Sbjct: 237 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFSSYIDRFH 296

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 297 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 356

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 357 VFSIVFSKLNI 367


>gi|27381005|ref|NP_772534.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354171|dbj|BAC51159.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 367

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 127/368 (34%), Positives = 193/368 (52%), Gaps = 11/368 (2%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG- 67
               G W +     +   V  A   +    S  +D+S + ++DT GA LI          
Sbjct: 8   LCATGTWTASFAPVLERMVADAEKLAGSPQSIFIDVSEVAKLDTFGAWLIERLRRSLTQG 67

Query: 68  --KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
             + ++ G+S +   L   +            P       +   +   IG+ +       
Sbjct: 68  TVEAQIAGLSANYSSLVDEVRRVRA------TPVVDAGTITITGMLDQIGRAVAGVAGTV 121

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                +LG V++  G        F+  L S +  M  V    VP+++LI+F+ G +IAQQ
Sbjct: 122 AGLIDMLGAVLAAGGRVLIHPRSFR--LTSTVHHMEQVCWRAVPIIVLITFLIGCIIAQQ 179

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           G F   +FGA+IF +D++ +L LREIGVLL A+M+AGRSGSA  AE+GSMK+ EEIDA+R
Sbjct: 180 GIFHFRRFGADIFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMKMREEIDALR 239

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           TMG D + +L+ PR+ AL+++LP+L  L   +A+ G  +V W Y  +    F  R     
Sbjct: 240 TMGFDPIEVLVLPRMLALVLALPILAFLGAMAALYGGGLVAWLYGGVDPEAFLLRLRDAI 299

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           ++ +   G++KAP MA  IGIVA  EG AV   + SLG+  T  VV+ I  VI++D +FA
Sbjct: 300 SIDHFIVGIVKAPVMAAVIGIVACVEGLAVQGSAESLGQHTTASVVKGIFFVIVMDGVFA 359

Query: 366 IFYFAIGI 373
           IF+ +IG+
Sbjct: 360 IFFASIGM 367


>gi|163759630|ref|ZP_02166715.1| ABC transporter, membrane spanning protein [Hoeflea phototrophica
           DFL-43]
 gi|162283227|gb|EDQ33513.1| ABC transporter, membrane spanning protein [Hoeflea phototrophica
           DFL-43]
          Length = 428

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 151/371 (40%), Positives = 226/371 (60%), Gaps = 10/371 (2%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM- 62
            G       G+W+   I+ +  +++ ++ K I     ++DLS ++  DT GA L+   M 
Sbjct: 63  GGRQRLALWGDWRHAAIAGVYGELL-SVQKKISGADLVIDLSDLSNFDTAGAWLVRKTMV 121

Query: 63  --EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
             +     ++++G S  +  L S I           +   +     F+ +   +G+ + +
Sbjct: 122 VAKGQGASVEIEGASKPVSGLLSAI----PDPADRAEVAATERAPLFQRIFAPVGRALYE 177

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
             +D  +  +ILG  +         S        +++ Q+ ++GV  VP+++L+SF+ GA
Sbjct: 178 LFDDLIASMYILGSAVRGAQLKLDRSAGISP--AAIVTQIDHMGVRAVPIIMLMSFLIGA 235

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           +IAQQGAFQL  FGAE+F +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EE
Sbjct: 236 IIAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREE 295

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +DA++ +GL+ V +L+ PR+ AL ++LPLLT++ANF+A+ GA+ V W Y  I   VF SR
Sbjct: 296 VDALKVIGLNPVGVLVFPRLVALTVALPLLTVVANFAALAGAAAVAWSYSGITPDVFTSR 355

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                 +  + +G+IKAPFMA  IGIVA  EG  VG  + SLG++VT  VV+SI +VI++
Sbjct: 356 LREAIDMTTVASGMIKAPFMALIIGIVASVEGMKVGGSAESLGRRVTASVVKSIFVVILV 415

Query: 361 DSLFAIFYFAI 371
           D LFAIFY AI
Sbjct: 416 DGLFAIFYAAI 426


>gi|163793381|ref|ZP_02187356.1| ABC transporter, inner membrane subunit [alpha proteobacterium
           BAL199]
 gi|159181183|gb|EDP65698.1| ABC transporter, inner membrane subunit [alpha proteobacterium
           BAL199]
          Length = 391

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 118/375 (31%), Positives = 213/375 (56%), Gaps = 12/375 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           + +G  V R  G W       +   +    +++  + S  VD ++++ +D+ GA +I   
Sbjct: 26  TRDGTLVVRLRGPWTLQTALSVDAAIRALADRA--AASVTVDATSLSRLDSAGAWVIQRT 83

Query: 62  MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
           + ++  +   +++ G+   ++ +    +   +       P      +S  N    +G++ 
Sbjct: 84  VAQFDRRGVPVEIVGLDEGLQAILDKAAEHDQSADIAPAPT-----SSLLNFLERLGRRS 138

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           V+ ++   +   +LG+V+  +G         +G   +++ Q+   GV+ +P+V L+ F+ 
Sbjct: 139 VEGLHTGRNLLGLLGVVVVASGRIVVRPMTLRG--TAVVAQIEATGVTALPIVGLLCFLV 196

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G V+A  GA QL++FGA   +++L+ I  LREIG+LLTA+++AGRSGSA  A+IG+MK+N
Sbjct: 197 GVVLAYMGALQLTRFGAANLTVNLVGISVLREIGILLTAIIVAGRSGSAFAAQIGTMKVN 256

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           +EIDA+ TMGL  + +L+ PR+ ALII LP LT+ A+ + ++G ++V     D+    F 
Sbjct: 257 QEIDALETMGLSVIDVLVLPRVIALIIVLPALTVFADVAGLVGGAMVCMFQLDMTIGQFL 316

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           ++  +  T+ +  TGLIKAP  A AI +V    G  V   + S+G++ T  VV+SI +VI
Sbjct: 317 TQLSAGVTVWSFATGLIKAPVFALAIALVGCHSGLGVSGSAESVGRQTTRAVVESIFLVI 376

Query: 359 IIDSLFAIFYFAIGI 373
           I++++FAI +  IGI
Sbjct: 377 ILNAIFAIAFAKIGI 391


>gi|114707109|ref|ZP_01440007.1| permease of ABC transporter [Fulvimarina pelagi HTCC2506]
 gi|114537305|gb|EAU40431.1| permease of ABC transporter [Fulvimarina pelagi HTCC2506]
          Length = 394

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 142/374 (37%), Positives = 228/374 (60%), Gaps = 9/374 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
             G  V   AG+W +  I  I  D+       + +D A+ DLS + +IDT GA ++    
Sbjct: 27  RGGTLVLEAAGDWLARTIGSIESDLERTARADLGADVAM-DLSRVGQIDTAGAFVLERLK 85

Query: 63  EKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
                K   ++++G++     LF+ +     ++   ++ +RS       N    +G  ++
Sbjct: 86  RDLRAKREHVEVEGLAERNTALFAAVGSAMDRERPVRQRERS---KILTNAVIAVGSFVI 142

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
              ++  +  +++G  +   G   +   + +    ++  Q+  +GV  +P+++LI+F+ G
Sbjct: 143 GIKDELVNGLNLIGGAMYGAGSRISGRTQSRP--AAIFNQIDQMGVKAIPIIVLITFLVG 200

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            +IAQQGAFQL ++G E+++++L+SIL LREIGVLL A+MIAGRSGSAI AEIGSMK+ E
Sbjct: 201 GIIAQQGAFQLRRYGGEVYAVNLISILVLREIGVLLAAIMIAGRSGSAICAEIGSMKMRE 260

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DA+  +GL+ + +L+ PR+ AL I+LPLLT++AN +A++G +I +  Y DI F  F  
Sbjct: 261 EVDALHVIGLNPIGVLVFPRLVALSIALPLLTVIANLAALVGGAITLRIYSDISFLNFLQ 320

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
               +  L  +F+GL+KAPFMA  IG+VA  EG  VG  + SLG +VT  VV+SI +VI+
Sbjct: 321 GLQQSIDLFTVFSGLLKAPFMAILIGLVAANEGMKVGGSAESLGLRVTAAVVKSIFLVIV 380

Query: 360 IDSLFAIFYFAIGI 373
           +D LFAIFY +IG+
Sbjct: 381 MDGLFAIFYASIGL 394


>gi|107102741|ref|ZP_01366659.1| hypothetical protein PaerPA_01003808 [Pseudomonas aeruginosa PACS2]
          Length = 372

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 114/364 (31%), Positives = 186/364 (51%), Gaps = 4/364 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R  G+W     + +  +V     +S  + +A  DLS +  +DT GA L+   +      
Sbjct: 12  VRAIGDWTLAHYTALEREVTRL--RSEVAANASFDLSQLGALDTAGAALLAELLGAERLA 69

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
              +       +  +L+           +P++     +   L   IG  +  F     + 
Sbjct: 70  DLAELEPGLPRERQALLKTVGHALHDFCEPEKPKPPTTAIELLARIGCAMETFWLHLKAL 129

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +GL +            ++  +  L+  +   G+  VP++ L++F+ GAVIA  GA 
Sbjct: 130 LGFIGLTLETLFRSLVRPASWR--VTPLVANIEKSGLDAVPIIALLTFLVGAVIAFLGAT 187

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L+ FGA I++++L+    LRE  VLLTA+++AGR+ SA  A+IGSMK NEEIDAIR +G
Sbjct: 188 VLANFGATIYTVNLVVFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRALG 247

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           L+ + +L+ PR+ AL++SLP+LT +     I+G   V     DIP A+F S       + 
Sbjct: 248 LNPIELLVLPRVLALLVSLPMLTFVGMLCGIVGGMTVCAWTLDIPPAMFLSIMEDGIGVQ 307

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   G+ KAP  A  I ++   EGF V   + S+G+  TT VV SI +VI++D+L A+F+
Sbjct: 308 HFLVGISKAPLFAFLIAVIGCLEGFKVSGSAQSVGEHTTTSVVHSIFVVILLDALAALFF 367

Query: 369 FAIG 372
             +G
Sbjct: 368 MEMG 371


>gi|325982943|ref|YP_004295345.1| hypothetical protein NAL212_2362 [Nitrosomonas sp. AL212]
 gi|325532462|gb|ADZ27183.1| protein of unknown function DUF140 [Nitrosomonas sp. AL212]
          Length = 370

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 88/372 (23%), Positives = 179/372 (48%), Gaps = 11/372 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +++G       G++    +  +   +   +++  ++ +   DL+ I +IDT G  L+   
Sbjct: 9   TKDGSPHIILTGDYTLATLESLLKPLEDELSREARNQNLYWDLTGIGQIDTAGTILLWRV 68

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
             K     +LQ +    E++F  +             Q    +         +GK ++  
Sbjct: 69  -WKTKRPDRLQ-LRPEHEKMFQRLERLPTH-------QSGIKHRDLLWPITTLGKLVLVL 119

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
              S     ++G ++ +                 +   +Y  G   + +  L+ F+ G V
Sbjct: 120 WQHSVGLITLIGQLMLDVIYLIRHPVYIP--WREISANLYRTGAQALGITALVGFLIGIV 177

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           ++   + QL  FGA+IF I+++ I  +RE+G +L A+++AGRSGSA+ A++G M++ +E+
Sbjct: 178 LSYLSSKQLQLFGADIFIINILGISIIRELGPMLAAILVAGRSGSAMTAQLGVMRVTQEL 237

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  MG+   + LI P++  L I++PLL +  +  A++G  +       + +  F +  
Sbjct: 238 DALTVMGISHSQRLILPKVLGLGIAMPLLVMWTSAVALLGGMVAAEIQLGLHYHYFITAL 297

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
             +  + N++ GL K       I ++A   G  +  ++ SLG+  T  VV +I++VIIID
Sbjct: 298 PDSVPVGNLWLGLGKGIVCGMVIALIACHFGLKIKPNTESLGEGTTASVVTAITMVIIID 357

Query: 362 SLFAIFYFAIGI 373
           ++FA+ +  +G+
Sbjct: 358 AIFAVLFSDVGL 369


>gi|29654061|ref|NP_819753.1| ABC transporter permease [Coxiella burnetii RSA 493]
 gi|161830426|ref|YP_001596961.1| ABC transporter, permease protein [Coxiella burnetii RSA 331]
 gi|165924016|ref|ZP_02219848.1| ABC transporter, permease protein [Coxiella burnetii RSA 334]
 gi|212212807|ref|YP_002303743.1| ABC transporter permease protein [Coxiella burnetii CbuG_Q212]
 gi|29541327|gb|AAO90267.1| ABC transporter permease protein [Coxiella burnetii RSA 493]
 gi|161762293|gb|ABX77935.1| ABC transporter, permease protein [Coxiella burnetii RSA 331]
 gi|165916539|gb|EDR35143.1| ABC transporter, permease protein [Coxiella burnetii RSA 334]
 gi|212011217|gb|ACJ18598.1| ABC transporter permease protein [Coxiella burnetii CbuG_Q212]
          Length = 377

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 114/364 (31%), Positives = 189/364 (51%), Gaps = 13/364 (3%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAEL---IMYFMEKYHGKI 69
           G+W    +S + D + +   K   S+  I+    IT++D+ GA L   ++  ++     I
Sbjct: 24  GDWTVSHLSPLEDQLPLYAEKL--SEKVIIHADKITKMDSAGALLFYTLINHLKSLGKAI 81

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
           ++ G+S + + L  LI    +   +     ++        + Y +G+  V          
Sbjct: 82  EITGLSENAQSLLKLIGNESKFLRQPLPSSKTP------GVVYLLGEWAVTKWRVLIDFL 135

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
             +G V +  G+        +    +++R +   G   +P+V L+SF+ G V+  Q A Q
Sbjct: 136 TFVGEVATTAGQGILKPQ--RIQWRAILRAIEETGYQALPIVALLSFLVGVVLTYQIALQ 193

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L  + A+IF +D+     LRE G L+TA++ AGR+ +A  A+IG+MK+NEEIDA+ TMG+
Sbjct: 194 LDSYNADIFVVDITGAAILREFGPLITAIIAAGRTSTAFTAQIGTMKVNEEIDALNTMGV 253

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
             +  L+ P+I ALIISL LLT+ A+     G+ I+     DI +  F  RFH    + +
Sbjct: 254 VPIEHLVLPKIIALIISLTLLTVWADIFGTFGSMIMAKSQLDIGYLAFLDRFHHAIAVRH 313

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              GLIKAP     I  V   +GF VG  ++S+G+K T   VQSI ++II D++F++ + 
Sbjct: 314 YIAGLIKAPVFGLIIATVGCFQGFQVGASADSVGQKTTQSAVQSIFLIIIADAIFSVIFS 373

Query: 370 AIGI 373
             GI
Sbjct: 374 LRGI 377


>gi|217969575|ref|YP_002354809.1| hypothetical protein Tmz1t_1154 [Thauera sp. MZ1T]
 gi|217506902|gb|ACK53913.1| protein of unknown function DUF140 [Thauera sp. MZ1T]
          Length = 385

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 113/373 (30%), Positives = 198/373 (53%), Gaps = 5/373 (1%)

Query: 1   MSENGIT-VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
           ++ +G+  V R  G+W     + +         +     +  V+L+ +  +DT GA L+ 
Sbjct: 16  LAGDGVAAVLRLRGDWTLAHHAALRRQADALRGRI--DAATRVELAELGTLDTAGARLLH 73

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
             +        L        +  +L+          ++   +    +  ++  HIG  ++
Sbjct: 74  GLLGGERVAALLADEGALSRERRALLKAVADAIEGREERPAADEGYALGDVLAHIGHTML 133

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
            F     +    +GL++           +++  + +L+  +   G+  VP++ L++F+ G
Sbjct: 134 VFWRHVSALTGFIGLILETALRVSVQPRRWR--VTALVANLERTGLDAVPIIALLTFLVG 191

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           AV+A  GA  L  FGA IF++DL++   LRE GVLLTA+++AGR+ S+  A+IGSM+ NE
Sbjct: 192 AVVAFLGATVLQNFGASIFTVDLVAYSFLREFGVLLTAIIVAGRTASSFTAQIGSMRANE 251

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDAIR +GLD V +L+ PR++AL+++LP+LT +A  + I+G  +V     DI   +F S
Sbjct: 252 EIDAIRVLGLDPVELLVLPRVYALLVALPILTFVAMIAGIVGGMLVSAMTLDISPVLFLS 311

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           R      L + + G+ KAP  A  I ++   EGF V   + S+G+  T+ VVQSI +VI+
Sbjct: 312 RIEDNVGLIHFWVGMAKAPIFAFLIAVIGCLEGFRVQGSAQSVGEHTTSAVVQSIFVVIV 371

Query: 360 IDSLFAIFYFAIG 372
           +D++ A+F   +G
Sbjct: 372 VDAIAALFCMEMG 384


>gi|16126557|ref|NP_421121.1| ABC transporter permease [Caulobacter crescentus CB15]
 gi|221235339|ref|YP_002517776.1| ABC transporter permease protein [Caulobacter crescentus NA1000]
 gi|13423841|gb|AAK24289.1| ABC transporter, permease protein, putative [Caulobacter crescentus
           CB15]
 gi|220964512|gb|ACL95868.1| ABC transporter permease protein [Caulobacter crescentus NA1000]
          Length = 371

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 109/372 (29%), Positives = 188/372 (50%), Gaps = 11/372 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            ++G  V   AG+W +  + +    +  A+           DL+ +   DT GA  I+  
Sbjct: 11  EQDGGLVAVLAGDWTARGLFDAGPRLTEALE---DRRDLRFDLTGVNRCDTAGAYAILRA 67

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
                   ++      + +L  L+    + +     PQR+     F  L   IG+ +   
Sbjct: 68  AGDRLKSDRII-ARKQVLRLLELVGAAIKVE-----PQRAARPTGFYALLERIGRGVFGL 121

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             D       LG ++   G    S ++ +     ++      G+  +P++   +F  GAV
Sbjct: 122 FADGYGTLVFLGHLLVALGRSIVSPHRIR--WAPIVALCERAGLDAMPIIATTTFFIGAV 179

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A  GA  L+ FGA++++++L+ I  +RE  +L+TA+++AGRS S+  AEIGSMK+N+EI
Sbjct: 180 VALLGANMLTDFGAQVYAVELIGISVMREFNILITAILLAGRSASSFAAEIGSMKMNQEI 239

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA++ MG+D    L+ PR  AL++++PLLT +A  + + G  +V+W   D+    F  R 
Sbjct: 240 DAMQVMGVDPYEALVLPRFAALLLTIPLLTFVATIAGLAGGILVVWSVLDLSPTFFLQRI 299

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                  + + GL KAP MA  I  +  ++G  VG    SLG++VT  VV +I  +I+ID
Sbjct: 300 VDYVGATHFWIGLSKAPVMAMVIAAIGCRQGMEVGKDIESLGRRVTAAVVHAIFAIILID 359

Query: 362 SLFAIFYFAIGI 373
           ++FA+ Y  + I
Sbjct: 360 AVFALIYMELDI 371


>gi|148925785|ref|ZP_01809473.1| putative ABC transport system permease protein [Campylobacter
           jejuni subsp. jejuni CG8486]
 gi|145845795|gb|EDK22886.1| putative ABC transport system permease protein [Campylobacter
           jejuni subsp. jejuni CG8486]
          Length = 369

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/369 (30%), Positives = 184/369 (49%), Gaps = 13/369 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
                G W    I ++     +A+   IQS   I D   +  IDT G    +     ++ 
Sbjct: 11  TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKD 67

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
            + KI  + +++  + LF L    +++  K +K  ++F           +GK  ++ +  
Sbjct: 68  KNIKITKESLNSRFQILFELCEKNYQRLGKTKKSHKNFS-----EYFIDLGKLSLELLKI 122

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                +  G   ++      +   F+   ++ +  +       +P+VIL + + G V+A 
Sbjct: 123 LIKFINFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q A+QL+QFGA IF +DLM I   RE+  L+ A++IAGRS S+  A+IG MKI +EI A+
Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            TMG      ++ PR+ AL+I++PL+  +++  +IIG  +V     DI FA F  RF   
Sbjct: 241 NTMGFRSFEFIVIPRVMALVIAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREA 300

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             + +IF GL KAP     IG++A   GF V   + S+G   T  VV +I  VI  D+LF
Sbjct: 301 VDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF 360

Query: 365 AIFYFAIGI 373
           ++   + GI
Sbjct: 361 SVILTSTGI 369


>gi|317011599|gb|ADU85346.1| putative ABC transport system permease protein [Helicobacter pylori
           SouthAfrica7]
          Length = 377

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 105/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +          +D SA  ++D +    +   +
Sbjct: 14  DGADSVLILRGDWDFKTSVFRLDELKKILLDH--QGPLKMDFSACQKVDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           +     I+L  VS +      ++     K+   +  +    Y   + L   +GK IV+  
Sbjct: 72  KGRSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKKY---ELLITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  RFH
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRFH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 IFSIVFSKLNI 377


>gi|198282934|ref|YP_002219255.1| hypothetical protein Lferr_0798 [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218665617|ref|YP_002425137.1| ABC transporter, permease protein, putative [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|198247455|gb|ACH83048.1| protein of unknown function DUF140 [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218517830|gb|ACK78416.1| ABC transporter, permease protein, putative [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 378

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 170/367 (46%), Gaps = 17/367 (4%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-FMEKYH 66
             R +G W    +         A+     S     DLSA+  +D+ GA L+   +     
Sbjct: 26  TLRLSGRWTLRRLGGRFAAQEAALRNI--SPEVCWDLSAVEVLDSAGALLLWRAWGNHLP 83

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
             I++   +     +F+ ++       + + P               +G  +++   D  
Sbjct: 84  NNIRM---ADQHHSIFARLADIQPVAARPRHPWH---------FLDQLGAFLIETGRDLW 131

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
               ++G ++   G        F      +   +   G + +P++ LI F+ G VI+ Q 
Sbjct: 132 GLFLLMGALLLEFGRGLRHPRSFP--WREISATIVNTGPNSLPILTLIGFLIGVVISFQS 189

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A  L+Q+GA I+ I++  +  LRE G L+TA++++GRSGSA  A+IG M + EE+DA+RT
Sbjct: 190 ASTLAQYGANIYIINIAGLSILREFGPLITAIILSGRSGSAFTAQIGGMCVTEELDALRT 249

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
            G+  +R LI P++  L + +PLL +  +   + GA +V      I    F  +      
Sbjct: 250 FGIPPIRRLILPKVIGLALVMPLLVLWTDMVGLYGAMLVAKLELGISNRFFIQQMPVVVP 309

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
             N++ G++K       I  +A   G  V  ++ SL ++ T  VV SI+++I+ID++ A+
Sbjct: 310 SFNLWLGVVKGALFGILIAWIAGFHGLKVKPNTTSLSRETTNSVVMSITVMILIDAILAL 369

Query: 367 FYFAIGI 373
            +   GI
Sbjct: 370 VFANTGI 376


>gi|91786141|ref|YP_547093.1| hypothetical protein Bpro_0230 [Polaromonas sp. JS666]
 gi|91695366|gb|ABE42195.1| protein of unknown function DUF140 [Polaromonas sp. JS666]
          Length = 383

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 90/378 (23%), Positives = 186/378 (49%), Gaps = 22/378 (5%)

Query: 6   ITVFRFAGNWKSP---------EISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAE 56
              F   G W +           ++   + +      + ++ +   DLS + ++D +GA+
Sbjct: 18  GRRFVVRGAWTASDLTGRLVWDTLTAQLEILRRHAAPAGEASTVRWDLSGLEKLDHLGAQ 77

Query: 57  LIM-YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIG 115
           ++  ++   +  +++++        +   ++       K          + +K+L   +G
Sbjct: 78  VLWNHWGRDWPAQLQVE---PSQRAVLETVA-------KFAVVPPKPRGSDWKDLLVLLG 127

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
            + +  ++ S     ++G ++ +         +  G    L   +Y++G + +P+  L+ 
Sbjct: 128 NRALDLVDHSKGLVRLVGQLLLDIIRLVRHPKE--GPWRDLSGHLYHIGATALPITALVG 185

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
           F+ G V+A   + QL QFGA+ + ++++ I  +RE+G +L A++IAGRSGSAI A+IG M
Sbjct: 186 FLIGVVLAYLISQQLRQFGADAYIVNILGISLIRELGPVLAAILIAGRSGSAITAQIGVM 245

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           ++ EE+DA+R MG+     L+ PR  AL + +PL+++    +A++G  +       +  +
Sbjct: 246 RVTEELDAMRVMGIARGFRLVMPRALALAVVMPLISVWTTIAALLGGMLAADISMGVTPS 305

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            F +        AN+     K+      I +V    G  V  ++ SLG+  T  VV SI+
Sbjct: 306 YFINSLPRAVDAANLTLATGKSVVFGVLIAMVGCHYGLRVKPNTESLGQGTTASVVTSIT 365

Query: 356 IVIIIDSLFAIFYFAIGI 373
           +VI++D+LFA+ + ++GI
Sbjct: 366 VVILVDALFAVVFKSVGI 383


>gi|186474974|ref|YP_001856444.1| hypothetical protein Bphy_0205 [Burkholderia phymatum STM815]
 gi|184191433|gb|ACC69398.1| protein of unknown function DUF140 [Burkholderia phymatum STM815]
          Length = 379

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 102/374 (27%), Positives = 182/374 (48%), Gaps = 14/374 (3%)

Query: 4   NGITVFRFAGNWKSPEISE--IADDVVMAINKSI--QSDSAIVDLSAITEIDTIGAELIM 59
               + R +G W +  ++   +    +  + + +  ++  A  DLS +  +D +G + + 
Sbjct: 15  GQGKIVRLSGQWTALALARDRLHGQALPRLRELVDSRAHVAQWDLSNVERMDHVGGQALW 74

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
                Y     L  ++     +F  I+     + +N +P R F      +    +G  I 
Sbjct: 75  RVWG-YKLPRDLVALNDTQRDIFDRIALLDTVR-ENPEPVRRF------DPFTQLGLGIF 126

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
            F+        + G VI +      +          +   +Y  G   +P+  L++F+ G
Sbjct: 127 SFVEHVYGGVAMFGRVILDLLSIARNPKL--APWKEISANVYSAGTQALPITALVAFLIG 184

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V++   A QL  FGA  F ++++ +  LRE+G +L+A+++AGRSGSAI A+IG M++ E
Sbjct: 185 IVLSYLSAQQLRLFGANQFIVNILGMSVLRELGPVLSAILVAGRSGSAITAQIGVMRVTE 244

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DA+R MG+     LI PR+ AL +++PLL +  N  +++G ++       I  + F  
Sbjct: 245 ELDAMRVMGIPHGLRLILPRVIALSLAMPLLVMWTNIISLLGGALAAKLVLQIDVSYFVR 304

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                  +AN++ GL K       I I     GF +  +S SLG+  TT VV SI+IVI+
Sbjct: 305 ALPGVVPVANLWIGLGKGMVFGMLIAIAGCHFGFRIKANSQSLGEGTTTSVVSSITIVIL 364

Query: 360 IDSLFAIFYFAIGI 373
            D++FAI +  +G+
Sbjct: 365 ADAVFAILFQNVGL 378


>gi|182680400|ref|YP_001834546.1| hypothetical protein Bind_3500 [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182636283|gb|ACB97057.1| protein of unknown function DUF140 [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 376

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 126/365 (34%), Positives = 208/365 (56%), Gaps = 12/365 (3%)

Query: 12  AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK- 70
            G+W     + + + ++  + +  +  +  VD+  + EIDT GA L+   ++ +  + K 
Sbjct: 21  TGSWIGAHAAAL-EPLIEGVRRDGRGRTLSVDMRGVDEIDTFGACLLERLIQSWKAEGKE 79

Query: 71  --LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
             + G+S     L + +    R   +    + S       +     G+  +    D+ + 
Sbjct: 80  TTITGLSDRFGDLVAEVDHVSRSMSQAAAKRTS------LDSLRAFGRAAMDLWLDTRNF 133

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             +LG +++          K +    SL+ Q+  VG+  VP+++LI+F+ G +IAQQG F
Sbjct: 134 LVVLGRLVAVFLVVLRHPKKMR--FTSLVAQLDRVGLQAVPIILLITFLIGGIIAQQGLF 191

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
              +FGA+ + +DL++ L LRE+GVL+ A+M+AGRSGS+  AEIGSMK+ EEIDA+RTMG
Sbjct: 192 NFRKFGADTYVVDLLAFLVLRELGVLIVAIMVAGRSGSSYTAEIGSMKMREEIDALRTMG 251

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD V +L+ PR+ AL+++LP+LT L   +A+ G  +V W Y  +   +F  R    A+L 
Sbjct: 252 LDPVEVLLLPRVLALVLALPMLTFLGFMAALYGGGVVSWIYGGMSPPIFIERIRDAASLT 311

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
               GLIKAPFMA  IG++A  EG AV   + SLG + T+ VV+SI ++I++D +  +F+
Sbjct: 312 QFEVGLIKAPFMALVIGVIACTEGLAVQGSAESLGLRTTSSVVKSIFLIIVLDGILDLFF 371

Query: 369 FAIGI 373
            A G+
Sbjct: 372 AATGM 376


>gi|223040212|ref|ZP_03610491.1| ABC transport system permease [Campylobacter rectus RM3267]
 gi|222878573|gb|EEF13675.1| ABC transport system permease [Campylobacter rectus RM3267]
          Length = 378

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 107/373 (28%), Positives = 188/373 (50%), Gaps = 11/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
              G        +W     ++I      A+  S + D  +++   + E+D   A  +   
Sbjct: 16  QSGGKLAINLKNDWTYKLPAQIWTQT-AALIGSRKFDKIVLNFKDVKELDYAAALFLKNT 74

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
           +       +L  ++ H +++F+ I+        N K ++       +N    IGK +  F
Sbjct: 75  LLNARKNYELVNLTPHAQRIFASINSEV-----NPKIKQIINAKPHENPLSQIGKNLAAF 129

Query: 122 INDSCSQAHILGLVISNTGE-FCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
               C+  +  G  +    + F   + + K     ++      G+  V +V L SF+ G 
Sbjct: 130 FAGFCAFLNFTGEFLVKFSKIFMLKNIRVK----EILAYFEDAGIKSVFIVCLTSFLIGI 185

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A QG+  L +FGA I  +++M +L LREI  L+ A+++AGR  S+  A+IG MKI EE
Sbjct: 186 VLAYQGSNLLERFGATIIIVEMMGLLTLREIAPLIAAIIVAGRLASSFTAQIGVMKITEE 245

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA++TMG D  + L+ PR+ ALI+++PL+  LA+ + I G  +V+  Y +I F  + +R
Sbjct: 246 IDAMKTMGFDPFKFLVLPRVIALIVAMPLIVFLADVAGIFGEMVVMENYLNIGFDSYLAR 305

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
           F     + +++ GL KAPF    I  +    GF +  ++ S+G   T  VV +I  VI++
Sbjct: 306 FEQEVEIKHLYVGLFKAPFFGVVIAFIGCMRGFQISGNTQSVGTYTTVSVVNAIFGVIMV 365

Query: 361 DSLFAIFYFAIGI 373
           D+LF++ +  +GI
Sbjct: 366 DALFSVIFTHLGI 378


>gi|188590871|ref|YP_001795471.1| hypothetical protein RALTA_A0076 [Cupriavidus taiwanensis LMG
           19424]
 gi|170937765|emb|CAP62749.1| conserved hypothetical protein, DUF140; putative TRANSMEMBRANE
           PROTEIN [Cupriavidus taiwanensis LMG 19424]
          Length = 376

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 101/374 (27%), Positives = 181/374 (48%), Gaps = 16/374 (4%)

Query: 4   NGITVFRFAGNWKSPEIS--EIADDVVMAINKSIQS-DSAIVDLSAITEIDTIGAELIMY 60
           +G    +  G+W +  ++    A  +   +++  Q+ D A   L+ +  +D IG +L+  
Sbjct: 15  DGTVSVQLRGDWTALALAGCHQARQLRAQLHELAQAPDHAQWSLAGVERLDHIGGQLLW- 73

Query: 61  FMEKYHGKIKLQ-GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
             + ++G +  +   S    ++F+ I+    +  K     R        N    +G  ++
Sbjct: 74  --QAWNGALPQRLEASEGQRRVFARIAAVQDEGWKKHMVDRF-------NPVTLLGANVM 124

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
            F     +   +LG +  +   F       +G    +   +Y VG   + +  L+ F+ G
Sbjct: 125 SFGVQLGNGITMLGQLAFDLLRFARMPQ--RGPWREISANIYNVGYKALGITALVGFLIG 182

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V++   A QL  FGA  F ++++ +  +RE+G +L A++IAGRSGSAI A+IG M++ E
Sbjct: 183 IVLSYLSANQLRTFGASTFIVNILGMAVIRELGPVLAAILIAGRSGSAITAQIGVMRVTE 242

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DA+R MG+     LI PR+ AL I++PLL    +  A+ G  +       I    F  
Sbjct: 243 ELDAMRVMGISHGFRLIMPRVIALAIAMPLLVAWTDVMALAGGMLAARMQLGISATFFLR 302

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                  +AN++ GL K       I + A   G  +  ++ SLG+  T  VV +I+IVI+
Sbjct: 303 ELPDAVPVANLWLGLGKGVVFGILIALTACHFGLRIKPNTQSLGEGTTASVVTAITIVIL 362

Query: 360 IDSLFAIFYFAIGI 373
            D++FAI +  +G+
Sbjct: 363 ADAVFAILFKDVGL 376


>gi|146305413|ref|YP_001185878.1| hypothetical protein Pmen_0373 [Pseudomonas mendocina ymp]
 gi|145573614|gb|ABP83146.1| protein of unknown function DUF140 [Pseudomonas mendocina ymp]
          Length = 379

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 123/373 (32%), Positives = 204/373 (54%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S +  +  R  G+W     S +   V+    +        VDL  +  +DT GA L++  
Sbjct: 13  STDAASGLRIGGDWTLAHYSRLEPQVLALRERL--HGQESVDLDELAALDTAGAALLVEL 70

Query: 62  M--EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
           +  E+     +   +ST    L   ++        +Q+ Q+    ++ + +  HIG+ + 
Sbjct: 71  LGSERLRQLAQQDNLSTERRALLLAVADAMAG---SQQVQQHATPSALREVLGHIGEAVE 127

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                       +GL +S          +++  L SL   +   G++ VP+V L++F+ G
Sbjct: 128 TTWCHGRELLGFMGLTLSGMLTILLRPARWR--LTSLAAHLEQCGLNAVPIVALLTFLVG 185

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           AV+A  GA  L+ FGA I++++L++   LRE GVLLTA+++AGR+ SA  A+IGSMK NE
Sbjct: 186 AVVAFLGATILADFGASIYTVNLVAFSFLREFGVLLTAILMAGRTASAFTAQIGSMKANE 245

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDAIRT+GL  + +L+ PR++A++I+LP+LT +A  S I+G ++V     DIP  ++ S
Sbjct: 246 EIDAIRTLGLSPIELLVLPRVFAMLIALPILTFIAMLSGIVGGAVVCAVSLDIPLTMYMS 305

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
               +  L +   GL+KAP  A  I ++   EGF V   + S+G+  T+ VVQSI +VI+
Sbjct: 306 ILQDSDLLRHFLVGLLKAPIFAFLIALIGCLEGFKVSGSAQSVGEHTTSAVVQSIFVVIL 365

Query: 360 IDSLFAIFYFAIG 372
           +D+L A+F   +G
Sbjct: 366 LDALAALFLMEMG 378


>gi|255322244|ref|ZP_05363390.1| ABC transport system permease [Campylobacter showae RM3277]
 gi|255300617|gb|EET79888.1| ABC transport system permease [Campylobacter showae RM3277]
          Length = 378

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 110/373 (29%), Positives = 186/373 (49%), Gaps = 11/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
              G        NW     ++I      A+  S + +  +++   I E+D   A      
Sbjct: 16  QSGGKLTINLKNNWNYKLPAQIWTQT-AALIGSKKFNKIVLNFKEIKELDYAAALFFKNT 74

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
                   +L  ++ H +++F+ I+        N K ++       +N    IGK +  F
Sbjct: 75  FLNACKNYELVNLTPHAQKIFASINSEI-----NPKIKQIIDAKPHENPFSQIGKNLTAF 129

Query: 122 INDSCSQAHILGLVISNTGE-FCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
               C+  +  G  +    + F   + + K     ++      G+  V +V L SF+ G 
Sbjct: 130 FAGFCAFLNFTGEFLVKFSKIFMLKNIRVK----EILAYFEDAGIKSVFIVCLTSFLIGI 185

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A QG+  L  FGA I  +++M +L LREI  L+ A+++AGR  S+  A+IG MKI EE
Sbjct: 186 VLAYQGSNLLESFGATIIIVEMMGLLTLREIAPLIAAIIVAGRLASSFTAQIGVMKITEE 245

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA++TMG D  + L+ PR+ ALI+++PL+  LA+ + I G  +V+  Y +I F  + +R
Sbjct: 246 IDAMKTMGFDPFKFLVLPRVIALIVAMPLIVFLADVAGIFGEMVVMENYLNISFDSYLAR 305

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
           F     + +++ GL KAPF    I  +    GF +G ++ S+G   T  VV +I  VI++
Sbjct: 306 FSQEVDIKHLYVGLFKAPFFGIVIAFIGCMRGFQIGGNTQSVGTYTTVSVVNAIFGVIMV 365

Query: 361 DSLFAIFYFAIGI 373
           D+LF+I +  +GI
Sbjct: 366 DALFSIIFTQLGI 378


>gi|254487283|ref|ZP_05100488.1| ABC transporter, inner membrane subunit [Roseobacter sp. GAI101]
 gi|214044152|gb|EEB84790.1| ABC transporter, inner membrane subunit [Roseobacter sp. GAI101]
          Length = 369

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 130/371 (35%), Positives = 211/371 (56%), Gaps = 14/371 (3%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
            T    +G+ +   +    D +  +      +   ++D+S +T IDT GA L++Y  ++ 
Sbjct: 10  GTRLVVSGDLRIAAV----DALDRSALLKKAAGVTVIDISGLTRIDTAGAWLLVYAQDRL 65

Query: 66  HG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                ++++ G S    QL  ++  +       +   ++       +    +G+ +    
Sbjct: 66  AAPGKRVEITGTSDAQAQLIDVVRASMPPADIAEPKPKT-----LADQVETLGRMVTSGA 120

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
             +      LG V++          +F+  L SL+     VG++ VP+V L+SF+ G V+
Sbjct: 121 RKTVELTSFLGQVVATMAGTLIHPRRFR--LTSLVHHCQEVGLNAVPIVALMSFLIGVVL 178

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL QFGAE+F +DL++I  LRE+G+LLTA+++AGRSGSA  A IGSMK+ EEID
Sbjct: 179 AFQGAVQLRQFGAEVFVVDLIAISVLRELGILLTAIIVAGRSGSAFTAAIGSMKMREEID 238

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+RT+GLD V IL+ PR+ AL++ LP L +LA+ S ++G +++ W    +  AVF SR  
Sbjct: 239 AMRTIGLDPVTILVVPRVLALMLMLPALGLLADISGLVGGAVMSWIELGVSPAVFQSRLV 298

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               + +   G+IKAPF A  IGI+   EG  VG  + SLG+  +T VV SI +VI++D+
Sbjct: 299 GNTDVWHFGVGMIKAPFFALIIGIIGCYEGMKVGGDAESLGRLTSTSVVLSIFMVIVMDA 358

Query: 363 LFAIFYFAIGI 373
           +F+IF+  +G+
Sbjct: 359 MFSIFFAIVGV 369


>gi|86152962|ref|ZP_01071167.1| ABC transporter, permease [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85843847|gb|EAQ61057.1| ABC transporter, permease [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 369

 Score =  283 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 110/369 (29%), Positives = 184/369 (49%), Gaps = 13/369 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
                G W    I ++     +A+   IQS   I D   +  IDT G    +     ++ 
Sbjct: 11  TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKD 67

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
            + KI  +G+++  + LF L    +++  K +K  ++F           +GK  ++ +  
Sbjct: 68  KNIKITKEGLNSRFQILFELCEKNYQRLGKTKKSHKNFS-----EYFIDLGKLSLELLKI 122

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                +  G   ++      +   F+   ++ +  +       +P+VIL + + G V+A 
Sbjct: 123 LIKFINFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q A+QL+QFGA IF +DLM I   RE+  L+ A++IAGRS S+  A+IG MKI +EI A+
Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            TMG      ++ PR+ AL++++PL+  +++  +IIG  ++     DI F  F  RF   
Sbjct: 241 NTMGFRSFEFIVIPRVMALVVAMPLIVAISDAISIIGGMMIAKLNLDISFVEFLRRFREA 300

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             + +IF GL KAP     IG++A   GF V   + S+G   T  VV +I  VI  D+LF
Sbjct: 301 VDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF 360

Query: 365 AIFYFAIGI 373
           ++   + GI
Sbjct: 361 SVVLTSAGI 369


>gi|109948194|ref|YP_665422.1| putative ABC transport system permease protein [Helicobacter
           acinonychis str. Sheeba]
 gi|109715415|emb|CAK00423.1| putative ABC transport system permease protein [Helicobacter
           acinonychis str. Sheeba]
          Length = 377

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 103/371 (27%), Positives = 183/371 (49%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W       + D++   +  S       +D S   ++D +    +   +
Sbjct: 14  DGSGSVLILGGDWDFRTSVFLLDELKKTL--SNHQGRLKMDFSRCQKVDFVFGMFLFDLI 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS        ++     K    +  +       ++ +   +GK IV+  
Sbjct: 72  KERSLNIELCNVSESNACALKVVRDWLEKDGNIESQK---TIKKYELVVTKMGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F      L+  +   G   +PV IL  F+ G  I
Sbjct: 129 NTFLNALNFCGMILFYFIKGVFNPKRF--CFTPLVYHINESGFKVLPVSILTVFIVGFAI 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
             QGA QL   G  + ++++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 TLQGALQLQDMGVPLTTVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ ALII LPL+  +A+  AI+G+   +    D+ F+ +  RFH
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALIIVLPLMVFIADAIAILGSMCAVKYQLDLTFSSYVDRFH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           ST T  + + G+IKAPF   AI +V    GF V   + S+G+  T  VV ++  +I +++
Sbjct: 307 STVTWNHFWVGIIKAPFWGFAIAVVGCMRGFEVRGDTESVGRLTTISVVNALFWIIFLNA 366

Query: 363 LFAIFYFAIGI 373
            F+I +  +GI
Sbjct: 367 TFSIVFSRLGI 377


>gi|113866165|ref|YP_724654.1| putative uncharacterized transport protein [Ralstonia eutropha H16]
 gi|113524941|emb|CAJ91286.1| putative uncharacterized transport protein [Ralstonia eutropha H16]
          Length = 378

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 102/374 (27%), Positives = 179/374 (47%), Gaps = 16/374 (4%)

Query: 4   NGITVFRFAGNWKSPEIS--EIADDVVMAINKSIQS-DSAIVDLSAITEIDTIGAELIMY 60
           +G       G+W +  ++    A  +   +++  Q+ DSA   L+ +  +D IG +L+  
Sbjct: 17  DGTVSVALRGDWTALALAGCHQARQLRAQLHELAQAPDSAQWSLAGVERLDHIGGQLLW- 75

Query: 61  FMEKYHGKIKLQ-GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
             + ++G +  +   S    ++F  I+    +  K     R        N     G  ++
Sbjct: 76  --QAWNGALPQRLDASEGQRRVFERIAAVQNEGWKKHMVDRF-------NPITLFGANVL 126

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
            F     S   +LG +  +   F       +G    +   +Y VG   + +  L+ F+ G
Sbjct: 127 SFGAQLRSGITMLGQLAFDLLRFAGVPQ--RGPWREISANIYNVGYKALGITALVGFLIG 184

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V++   A QL  FGA  F ++++ +  +RE+G +L A++IAGRSGSAI A+IG M++ E
Sbjct: 185 IVLSYLSANQLRTFGASTFIVNILGMAVIRELGPVLAAILIAGRSGSAITAQIGVMRVTE 244

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DA+R MG+     LI PR+ AL I++PLL    +  A+ G  +       I    F  
Sbjct: 245 ELDAMRVMGISHGFRLIMPRVIALAIAMPLLVAWTDVMALAGGMLAARMQLGISATFFLR 304

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                  +AN++ GL K       I + A   G  +  ++ SLG+  T  VV +I+IVI+
Sbjct: 305 ELPDAVPVANLWLGLGKGVVFGILIALTACHFGLRIKPNTQSLGEGTTASVVTAITIVIL 364

Query: 360 IDSLFAIFYFAIGI 373
            D++FA+ +  +G+
Sbjct: 365 ADAVFAVLFKDVGL 378


>gi|220924819|ref|YP_002500121.1| hypothetical protein Mnod_4961 [Methylobacterium nodulans ORS 2060]
 gi|219949426|gb|ACL59818.1| protein of unknown function DUF140 [Methylobacterium nodulans ORS
           2060]
          Length = 386

 Score =  282 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 126/367 (34%), Positives = 202/367 (55%), Gaps = 10/367 (2%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEKYH 66
           R +G W + +   +             +    +DLS ++ +DT+GA ++      +    
Sbjct: 27  RLSGRWTADQAPAVEAAAAGIAASPAGAGRIQIDLSGLSRLDTLGAWVLERTRSEIAAAG 86

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
             ++  G       L   ++     +     P R        +L   +G  + +   +  
Sbjct: 87  RAVEYAGARPEHRILLREVA----YREPETAPARRRGLGPV-DLLAGLGAGMRQLGAEGL 141

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           S    LG V++      A    F+    + + QM  + + G P+++LI+F+ G ++ QQG
Sbjct: 142 SWLGFLGEVVAACLRVLARPRSFRR--AAFVNQMEQIALRGTPIIMLIAFLVGCIVTQQG 199

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
             QL +FGA+ F ++++ IL LRE+GVLLTA+M+AGRSGSA  AEIGSM++ EE+DA+R 
Sbjct: 200 IIQLQRFGAQSFVVNMIGILTLRELGVLLTAIMVAGRSGSAFTAEIGSMRMREEVDALRV 259

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MGLD + ILI PRI AL+++LP+L  LA+ +A+ G ++    Y ++    F +R  +  +
Sbjct: 260 MGLDPIEILIVPRILALMMALPMLGFLADLAALAGGALTSLAYGNLSLDAFLARLQNAVS 319

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
             +   GLIKAPFMA  IGI+A  EGF V   + SLG+ VT  VV+SI +VI++D +FAI
Sbjct: 320 YRHALVGLIKAPFMALIIGIIATSEGFRVEGSAESLGRHVTASVVKSIFMVIVLDGVFAI 379

Query: 367 FYFAIGI 373
           F+ AI +
Sbjct: 380 FFAAIDL 386


>gi|238796784|ref|ZP_04640289.1| ABC transporter, permease protein [Yersinia mollaretii ATCC 43969]
 gi|238719272|gb|EEQ11083.1| ABC transporter, permease protein [Yersinia mollaretii ATCC 43969]
          Length = 381

 Score =  282 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 119/360 (33%), Positives = 189/360 (52%), Gaps = 4/360 (1%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72
           G+W       +  +V+    ++      I DL+ +  +DT GA L+   + +       +
Sbjct: 25  GDWVLAHYRALEPEVMQL--RANLPSGVIFDLNQLGALDTAGATLLALLLGEARVGNLRE 82

Query: 73  GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHIL 132
                 E+   L+    R          +     +  L  +IG+ +V    D  S    +
Sbjct: 83  LAPKLPEERRVLLETVSRVLPDLSPEPSTKAPPFWLELLSNIGRSMVNLWEDIKSLLGFI 142

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           GL +           +++  + SLI  +  +G++ VP+++L++F+ GAVIA  GA  L+ 
Sbjct: 143 GLTLEALLGTLFRPARWR--MTSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTT 200

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
           FGA IF++DL+    LRE  VLLTA+++AGR+ SA  AEIG MK NEEIDAI+T+GL+ V
Sbjct: 201 FGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPV 260

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
            +L+ PR+ AL+ISLP+LT +     I G  +V     DI   +F S   ++  L +   
Sbjct: 261 ELLVLPRVLALLISLPMLTFIGMVCGIFGGMVVCALTLDISPTMFLSIMQNSNGLQHFLV 320

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           G+ KAP  A  I I+   EGF V   + S+G   TT VV SI +VI++D++ A+F+  +G
Sbjct: 321 GISKAPIFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEMG 380


>gi|298530599|ref|ZP_07018001.1| protein of unknown function DUF140 [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298509973|gb|EFI33877.1| protein of unknown function DUF140 [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 379

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 93/373 (24%), Positives = 181/373 (48%), Gaps = 17/373 (4%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            GI      G  ++  I  +  ++   + K+      ++D+  +  +D  G  L+++F  
Sbjct: 21  EGILHAVVRGRMEAGSIGPLWKELASKLKKNRAG--LVLDVEKVDYMDMSGQALLLHFSR 78

Query: 64  KYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
           +   +   ++++G+   + ++   I     +    Q+           +    +G+  V 
Sbjct: 79  QMQDRNLSVEVRGLRPELREIQEEIDCFDCRPRPMQRK---------LSALEELGRAAVN 129

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
              D+      +G  +S+           +     ++  M  VG   V ++ L+ F+ G 
Sbjct: 130 LGRDTRQFFSFVGEFVSSFAYSLTHPGTVR--WKDVLSHMEAVGGRAVFIIALMGFLIGV 187

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           +IA Q A  L  FGAEIF   L+ +  +RE+G L+T++++AGRSGSA  AEIG+MK NEE
Sbjct: 188 IIAFQTAITLRAFGAEIFVAKLLGLSIVRELGPLVTSIILAGRSGSAFAAEIGTMKTNEE 247

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           I+A++TMGL  VR L+ PR+ A ++  PLL I     + IG ++V+    D     +  +
Sbjct: 248 INALQTMGLSPVRFLVVPRMLAAMLVTPLLCIFFLLFSFIGGALVM-LSMDFTLTTYIHQ 306

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             ++  + +    ++K    +  +  +    G   G  ++++G+  T+ VV +I ++I+ 
Sbjct: 307 LKTSVGMTDFLGSMVKVFVFSILVAWIGCVRGLQTGSGASAVGRSTTSAVVSAIVLIILA 366

Query: 361 DSLFAIFYFAIGI 373
           D +FA+ Y+ +GI
Sbjct: 367 DGIFAVVYYMLGI 379


>gi|238789963|ref|ZP_04633742.1| ABC transporter, permease protein [Yersinia frederiksenii ATCC
           33641]
 gi|238721911|gb|EEQ13572.1| ABC transporter, permease protein [Yersinia frederiksenii ATCC
           33641]
          Length = 381

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 122/361 (33%), Positives = 196/361 (54%), Gaps = 6/361 (1%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72
           G+W     S +  +V     ++    + I DL+ +  +DT GA L+   +       KL+
Sbjct: 25  GDWVLAHYSVLEPEVTQL--RANLPHAVIFDLNQLGALDTAGATLLALLLGDERIN-KLR 81

Query: 73  GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF-KNLHYHIGKKIVKFINDSCSQAHI 131
            ++  + Q   ++  T    +   +P+ S    SF   L  + G+ +     D  S    
Sbjct: 82  ELAPKLPQERRVLLETVSHVLPGLEPESSEKPPSFWLELLANTGRSMDNLWQDIKSLLGF 141

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +GL +           +++  + SLI  +  +G++ VP+++L++F+ GAVIA  GA  L+
Sbjct: 142 VGLTLEALFGTVFRPSRWR--VTSLIANVQQIGLNAVPIIMLLTFLVGAVIAFLGATVLT 199

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            FGA IF++DL+    LRE  VLLTA+++AGR+ SA  AEIG MK NEEIDAI+T+GL+ 
Sbjct: 200 TFGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNP 259

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V +L+ PR+ AL+ISLP+LT +     I G  +V     +I   +F S   ++  L +  
Sbjct: 260 VELLVLPRVLALLISLPMLTFIGMVCGIFGGMVVCALTLNISPTMFLSIMQNSNGLQHFL 319

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
            G+ KAP  A  I I+   EGF V   + S+G   TT VV SI +VI++D++ A+F+  +
Sbjct: 320 VGISKAPIFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEM 379

Query: 372 G 372
           G
Sbjct: 380 G 380


>gi|153209306|ref|ZP_01947341.1| ABC transporter, permease protein [Coxiella burnetii 'MSU Goat
           Q177']
 gi|212219048|ref|YP_002305835.1| ABC transporter permease protein [Coxiella burnetii CbuK_Q154]
 gi|120575422|gb|EAX32046.1| ABC transporter, permease protein [Coxiella burnetii 'MSU Goat
           Q177']
 gi|212013310|gb|ACJ20690.1| ABC transporter permease protein [Coxiella burnetii CbuK_Q154]
          Length = 377

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 113/364 (31%), Positives = 188/364 (51%), Gaps = 13/364 (3%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAEL---IMYFMEKYHGKI 69
           G+W    +S + D + +   K   S+  I+    I ++D+ GA L   ++  ++     I
Sbjct: 24  GDWTVSHLSPLEDQLPLYAEKL--SEKVIIHADKIIKMDSAGALLFYTLINHLKSLGKAI 81

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
           ++ G+S + + L  LI    +   +     ++        + Y +G+  V          
Sbjct: 82  EITGLSENAQSLLKLIGNESKFLRQPLPSSKTP------GVVYLLGEWAVTKWRVLIDFL 135

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
             +G V +  G+        +    +++R +   G   +P+V L+SF+ G V+  Q A Q
Sbjct: 136 TFVGEVATTAGQGILKPQ--RIQWRAILRAIEETGYQALPIVALLSFLVGVVLTYQIALQ 193

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L  + A+IF +D+     LRE G L+TA++ AGR+ +A  A+IG+MK+NEEIDA+ TMG+
Sbjct: 194 LDSYNADIFVVDITGAAILREFGPLITAIIAAGRTSTAFTAQIGTMKVNEEIDALNTMGV 253

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
             +  L+ P+I ALIISL LLT+ A+     G+ I+     DI +  F  RFH    + +
Sbjct: 254 VPIEHLVLPKIIALIISLTLLTVWADIFGTFGSMIMAKSQLDIGYLAFLDRFHHAIAVRH 313

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              GLIKAP     I  V   +GF VG  ++S+G+K T   VQSI ++II D++F++ + 
Sbjct: 314 YIAGLIKAPVFGLIIATVGCFQGFQVGASADSVGQKTTQSAVQSIFLIIIADAIFSVIFS 373

Query: 370 AIGI 373
             GI
Sbjct: 374 LRGI 377


>gi|330861182|emb|CBX71439.1| hypothetical protein YEW_CA08640 [Yersinia enterocolitica W22703]
          Length = 381

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 117/360 (32%), Positives = 186/360 (51%), Gaps = 4/360 (1%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72
           G+W       +   V     ++ Q  S + DL+ +  +DT GA L+   +         +
Sbjct: 25  GDWVLAHYRVLEPVVTQ--FRASQPQSVVFDLTQLGALDTAGATLLALLLGDERINHLRE 82

Query: 73  GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHIL 132
                 E+  +L+    R              + +     + G+ +     D  S    +
Sbjct: 83  LAPKLPEERRTLLETVSRVLPDLASESSEKPPSFWLEFLANTGRSVDNLWQDIKSLLGFV 142

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           GL +           +++  + SLI  +  +G++ VP+++L++F+ GAVIA  GA  L+ 
Sbjct: 143 GLTLEALFSTIFRPSRWR--MTSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTT 200

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
           FGA IF++DL+    LRE  VLLTA+++AGR+ SA  AEIG MK NEEIDAI+T+GL+ V
Sbjct: 201 FGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPV 260

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
            +L+ PR+ AL+ISLP+LT +     I G  +V     DI   +F S   ++  L +   
Sbjct: 261 ELLVLPRVLALLISLPMLTFIGMICGIFGGMVVCALALDISPTMFLSIMQNSNGLQHFLV 320

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           G+ KAP  A  I I+   EGF V   + S+G   TT VV SI +VI++D++ A+F+  +G
Sbjct: 321 GISKAPIFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEMG 380


>gi|217978940|ref|YP_002363087.1| protein of unknown function DUF140 [Methylocella silvestris BL2]
 gi|217504316|gb|ACK51725.1| protein of unknown function DUF140 [Methylocella silvestris BL2]
          Length = 379

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 144/370 (38%), Positives = 216/370 (58%), Gaps = 6/370 (1%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           SE G+   + AG+W     ++I +     +     +  AI DL+ +  +DT GA LI   
Sbjct: 14  SEEGVR-LKLAGHWTLDACADIEEGAQALVGAGAGAKHAIFDLAGVQRMDTAGAWLIDGA 72

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
            ++   K      +    ++  L+   H +  +    ++ F+      L   +G+ +V  
Sbjct: 73  RQQLDAKGVSADFAGGRPEIDILLKEAHFRSFEQPPGRKGFY---IVTLLADVGESVVAS 129

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             D       LG V+++ G+       F+G   +L+ Q+  + + GVP+++LI+F+ GA+
Sbjct: 130 GRDIYRGVEFLGEVVASIGKSVIQPAHFRG--TALVAQIETIALRGVPIIVLINFLVGAI 187

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +AQQG FQL +FGA I  +DL+ IL LRE+GVLLTA+MI+GRSGSAI AE+GSMK+ EEI
Sbjct: 188 VAQQGIFQLRRFGATILVVDLIGILILRELGVLLTAIMISGRSGSAITAELGSMKMREEI 247

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  MGL  + +LI+PRI ALI+SLPLLT LA+ +A+ G  +V W Y  I    F +  
Sbjct: 248 DALVVMGLRPIDVLIAPRILALILSLPLLTFLADMAALAGGILVSWLYGGITPKSFIALL 307

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                L    +GLIKAPFM   IG++A  EG AV   + SLG++VT  VV+SI +VI++D
Sbjct: 308 PEAIALRTFLSGLIKAPFMGLIIGLIACMEGLAVAGSAESLGRQVTASVVKSIFMVIVVD 367

Query: 362 SLFAIFYFAI 371
            LFA+F+  I
Sbjct: 368 GLFAVFFATI 377


>gi|327478710|gb|AEA82020.1| ABC transporter permease [Pseudomonas stutzeri DSM 4166]
          Length = 385

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 114/369 (30%), Positives = 192/369 (52%), Gaps = 11/369 (2%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
              R  G+W     + +  +V     +    + + ++LS +  +DT GA L++  +    
Sbjct: 24  LRARIVGDWTLAHYAALRREVQRLRARI--DERSQIELSGLGALDTAGAGLLVELL---- 77

Query: 67  GKIKLQGVSTHIEQLFS---LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           G  ++  +     QL +    +  T    +       S     F  +  HIG+ +     
Sbjct: 78  GPERIAAIEAWAPQLPAERLALLRTVATALDQPDAAESPRGYEFGYVLAHIGRTVAAVWK 137

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
              +    +GL +           +++  L SL   +   G+  VP+V L++F+ GAV+A
Sbjct: 138 QQRALLGFIGLTLQTLLLTLPRPRRWR--LTSLAVHIEQTGLDAVPIVALLTFLVGAVVA 195

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
             GA  L+ FGA I++++L+    LRE GVLL A+++AGRS SA  A+IGSMK NEE+DA
Sbjct: 196 FLGATVLADFGATIYTVNLVGFSFLREFGVLLAAILLAGRSASAFAAQIGSMKSNEEVDA 255

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           IRT+GL  + +L+ PR+ A++I+LP+LT +   S I G  +V     DI   +FF+    
Sbjct: 256 IRTLGLSPIELLVLPRVLAMLITLPILTFVGMLSGIAGGLVVCVLALDISPTMFFNIMAR 315

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              +++   GL KAP  A  I ++   EGF V   + S+G+  T+ VVQ+I +VI++D++
Sbjct: 316 DIAVSHFLVGLGKAPVFAFVIAVIGCLEGFKVSGSAQSVGEHTTSSVVQAIFMVILLDAI 375

Query: 364 FAIFYFAIG 372
            A+F+  +G
Sbjct: 376 AALFFMEMG 384


>gi|123441584|ref|YP_001005570.1| ABC transporter, membrane permease [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122088545|emb|CAL11339.1| ABC transporter, membrane permease [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 381

 Score =  281 bits (720), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 117/360 (32%), Positives = 186/360 (51%), Gaps = 4/360 (1%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72
           G+W       +   V     ++ Q  S + DL+ +  +DT GA L+   +         +
Sbjct: 25  GDWVLAHYRVLEPVVTQ--FRASQPQSVVFDLTQLGALDTAGATLLALLLGDERINHLRE 82

Query: 73  GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHIL 132
                 E+  +L+    R              + +     + G+ +     D  S    +
Sbjct: 83  LAPKLPEERRTLLETVSRVLPDLASESSEKPPSFWLEFLANTGRSVDNLWQDIKSLLGFV 142

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           GL +           +++  + SLI  +  +G++ VP+++L++F+ GAVIA  GA  L+ 
Sbjct: 143 GLTLEALFSTIFRPSRWR--MTSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTT 200

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
           FGA IF++DL+    LRE  VLLTA+++AGR+ SA  AEIG MK NEEIDAI+T+GL+ V
Sbjct: 201 FGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPV 260

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
            +L+ PR+ AL+ISLP+LT +     I G  +V     DI   +F S   ++  L +   
Sbjct: 261 ELLVLPRVLALLISLPMLTFIGMICGIFGGMVVCALALDISPTMFLSIMQNSNGLQHFLV 320

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           G+ KAP  A  I I+   EGF V   + S+G   TT VV SI +VI++D++ A+F+  +G
Sbjct: 321 GISKAPIFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEMG 380


>gi|119897565|ref|YP_932778.1| putative ABC transporter permease [Azoarcus sp. BH72]
 gi|119669978|emb|CAL93891.1| putative ABC transporter permease protein [Azoarcus sp. BH72]
          Length = 380

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 127/372 (34%), Positives = 206/372 (55%), Gaps = 5/372 (1%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           ++  G  V R +G+W       IAD  V A+  ++Q  +A VD S +  +DT GA L++ 
Sbjct: 13  LAAAGGGVLRLSGDWTLAHYRSIAD-TVSALRANVQHGTA-VDASGLGALDTAGASLLVQ 70

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
            +  + G   L        +  +L+           +P+ +   ++  ++  HIG  +  
Sbjct: 71  LLG-HDGLQALSTDPALAPERRALLRAVADALATPPEPEPADTGSALGDVLEHIGIAMGV 129

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           F   +      +GL + +     A   +++  L +L   +    +  VP+V L++F+ GA
Sbjct: 130 FWRHAVGLLGFIGLTLESAFRIIAQPARWR--LTALAANLEKTALDAVPIVALLTFLVGA 187

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A  GA  L+ FGA IF++DL++   LRE GVLLTA+++AGR+ SA  A+IGSMK NEE
Sbjct: 188 VVAFLGATVLADFGASIFTVDLVAFSFLREFGVLLTAILVAGRTASAFTAQIGSMKANEE 247

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDAIR +GLD V +L+ PR++AL+++LP+LT +A  S I+G  +V     DI   +F S 
Sbjct: 248 IDAIRVLGLDPVELLVLPRVYALLLALPMLTFVAMLSGIVGGMLVCALTLDISPVMFLSI 307

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
           F +   L +   G+ KAP  A  I ++   EGF V   + S+G+  T+ VVQSI +VI++
Sbjct: 308 FENDVGLRHFIVGIAKAPIFAFLIAVIGCLEGFKVSGSAQSVGEHTTSAVVQSIFVVIVV 367

Query: 361 DSLFAIFYFAIG 372
           D++ A+    +G
Sbjct: 368 DAVAALLCMELG 379


>gi|304319773|ref|YP_003853416.1| hypothetical protein PB2503_00972 [Parvularcula bermudensis
           HTCC2503]
 gi|303298676|gb|ADM08275.1| hypothetical protein PB2503_00972 [Parvularcula bermudensis
           HTCC2503]
          Length = 380

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 131/366 (35%), Positives = 200/366 (54%), Gaps = 11/366 (3%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72
           G W         D  + A+N   + D A +DLS I  +DT GA ++     +  G+ + Q
Sbjct: 21  GEWTLRGGLTKIDSKIRALNFGPREDLAEIDLSQIEALDTAGALMLQRLRHRCMGEGRPQ 80

Query: 73  GVST-----HIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
            ++T       +         H    +   P+R     SF  L   +G+  +   N+  +
Sbjct: 81  AIATLTGMTDPQHELMERMAAHIADCEGDPPRRK----SFILLLNRVGQGTIAVGNEGLA 136

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +G V++       S  +F+  L + +  M   G++   +V L+SF+ GAV+A  GA
Sbjct: 137 ILSFVGSVVARLAGTIMSPARFR--LTATVAHMEEAGLNSTLIVGLMSFLIGAVVAFMGA 194

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             LS+FGAE+FS++L+ I  LRE GVLLTA++IAGRSGSA  A IGSMK+ EEIDA+R +
Sbjct: 195 RVLSEFGAEVFSVELVGISVLREFGVLLTAILIAGRSGSAFTASIGSMKLREEIDAMRAL 254

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+  +  LI PR  AL+++LP+L  LA F  ++G  +V W   DIP  +F  R     T+
Sbjct: 255 GISPLDALILPRTIALVLTLPVLAFLAGFLGLLGGGVVGWLALDIPPQLFIGRLQEIVTV 314

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            N+F GL+KAPF A  I +V    G +V   +  LG++ T  VVQS+ +VI++D+LFA+ 
Sbjct: 315 ENLFVGLVKAPFFAFVIAVVGCYHGMSVENSAEELGRRTTMAVVQSLFLVILLDALFAML 374

Query: 368 YFAIGI 373
           +  + I
Sbjct: 375 FLELDI 380


>gi|157736379|ref|YP_001489062.1| ABC transporter, permease protein [Arcobacter butzleri RM4018]
 gi|157698233|gb|ABV66393.1| ABC transporter, permease protein [Arcobacter butzleri RM4018]
          Length = 370

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 107/365 (29%), Positives = 182/365 (49%), Gaps = 12/365 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
                 W    +  I   +   +    ++    +D + + E D+     ++ F+  +  K
Sbjct: 18  LTLLNIWNKQTLPNIIKKIE--LLNFSKNSKLNIDFANLKECDSSAIIYLISFLNTFEEK 75

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
                 + + E++F      ++ K+  ++ +  FF          +GKK      +S   
Sbjct: 76  NITILNNKNHEKIFDFYKKHYQTKVLEEEKKNLFF--------EDLGKKSYDIYKESKEF 127

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G V         +  K +    ++++ +       + +V + SF+ G VIA QG+ 
Sbjct: 128 IGFIGKVFYFFIYAIFNPSKIR--FKAMLKYIETSAFDALLIVAVTSFLVGVVIAYQGSV 185

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           QL +FGA IF ++++SI   REI  L+TA++IAGRS S+  AEIG+MKI EEIDA++TM 
Sbjct: 186 QLEKFGANIFIVEMISITIFREIAPLVTAIVIAGRSASSYTAEIGAMKITEEIDAMKTMN 245

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
            +    L  PRI+AL ISLPLL   A+   + G  ++     D+ F  F +R H+   L 
Sbjct: 246 FEPTLFLTLPRIFALCISLPLLVFFADIIGVFGGMVIASSSLDVTFIEFINRLHNEVPLK 305

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           ++  G+ KA F   AI I+    GF V  ++ S+GK  T  VV +I +VI+ID++F++ +
Sbjct: 306 HLILGVFKALFFGFAIAIIGCYRGFQVQNNTTSIGKFTTMSVVNAIFVVILIDAVFSVIF 365

Query: 369 FAIGI 373
             +GI
Sbjct: 366 TQMGI 370


>gi|238764189|ref|ZP_04625142.1| ABC transporter, permease protein [Yersinia kristensenii ATCC
           33638]
 gi|238697602|gb|EEP90366.1| ABC transporter, permease protein [Yersinia kristensenii ATCC
           33638]
          Length = 381

 Score =  280 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 116/360 (32%), Positives = 185/360 (51%), Gaps = 4/360 (1%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72
           G+W      ++   V     ++    S + DL+ +  +DT GA L+   + +        
Sbjct: 25  GDWVLAHYRDLEPVVAQ--FRTNPPPSVVFDLNQLGALDTAGATLLALLLGESRINNLRD 82

Query: 73  GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHIL 132
                 E+   L+    R                +  L  + G+ +     D  S    +
Sbjct: 83  LAPKLPEERRILLETVSRVLPDLTAASSEKLPPFWLELLANTGRSVDNLWQDIKSLLGFV 142

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           GL +           +++  + SLI  +  +G++ VP+++L++F+ GAVIA  GA  L+ 
Sbjct: 143 GLTLEALFSTIFRPSRWR--MTSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTT 200

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
           FGA IF++DL+    LRE  VLLTA+++AGR+ SA  AEIG MK NEEIDAI+T+GL+ V
Sbjct: 201 FGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPV 260

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
            +L+ PR+ AL++SLP+LT +     I G  +V     DI   +F S   ++  L +   
Sbjct: 261 ELLVLPRVLALLVSLPMLTFIGMVCGIFGGMVVCALTLDISPTMFLSIMQNSNGLQHFLV 320

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           G+ KAP  A  I I+   EGF V   + S+G   TT VV SI +VI++D++ A+F+  +G
Sbjct: 321 GISKAPIFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEMG 380


>gi|312797432|ref|YP_004030354.1| ABC transporter permease protein [Burkholderia rhizoxinica HKI 454]
 gi|312169207|emb|CBW76210.1| ABC transporter permease protein [Burkholderia rhizoxinica HKI 454]
          Length = 390

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 95/371 (25%), Positives = 172/371 (46%), Gaps = 18/371 (4%)

Query: 9   FRFAGNWKSPEISEIADD-----VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            R  G W +  ++           +  +  +      + DLS I  +D +GA+ +     
Sbjct: 31  IRLGGQWTALSLALDQRRGGIAAKLRTLRDAAARADTLWDLSPIQRLDHVGAQALWQIWG 90

Query: 64  K-YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           +     + L      I +  +L+  T                 +  +    +G  +  F 
Sbjct: 91  RHLPCGLSLTDTQREIFERIALLDATREPAEPA----------AAIDPITRLGLAVFGFA 140

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                   +LG ++ + G       +       +   +Y  G   +P+  L++F+ G V+
Sbjct: 141 GHLRDGITLLGGLVIDCGRLLRDPRRIP--WSEISANVYAAGAQALPITALVAFLIGIVL 198

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           +   A QL  FGA  + ++++ +  +RE+G +L A+++AGRSGSAI A++G M++ EE+D
Sbjct: 199 SYLSAQQLRLFGANAYIVNILGLSIIRELGPVLAAILVAGRSGSAITAQLGVMRVTEELD 258

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R MG+     LI PR+ AL +++PLL I  +  A+ G  +      +I  + F     
Sbjct: 259 AMRVMGISHGLRLILPRVIALGVAMPLLVIWTDAIALAGGMLAAQLVLNIDMSFFIRSLP 318

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           S   +AN++ GL K       I +V    G  +  +S SLG+  TT VV SI++V++ D+
Sbjct: 319 SVVPVANLYLGLGKGVAFGMLIALVGCHFGLRIKPNSQSLGEGTTTSVVSSITVVMLADA 378

Query: 363 LFAIFYFAIGI 373
           +FAI +  IG+
Sbjct: 379 VFAIMFQRIGL 389


>gi|218780630|ref|YP_002431948.1| hypothetical protein Dalk_2788 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218762014|gb|ACL04480.1| protein of unknown function DUF140 [Desulfatibacillum alkenivorans
           AK-01]
          Length = 377

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 97/369 (26%), Positives = 178/369 (48%), Gaps = 12/369 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           ++   ++ R  G         +A  +  AI K   +   ++DL  +T +D  GA L+ + 
Sbjct: 13  NDGKGSILRLHGPLDQDAYFALAGPLRQAIKKGC-AGELVIDLKDVTRLDDFGALLLAHV 71

Query: 62  MEKYHG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            +  H       ++     + ++  L+ F         +  +       +N    +G  I
Sbjct: 72  HKAAHAVNSPCSIEAARPSVREVLDLLHFQRLINAPALEKPKH------ENPFVALGGAI 125

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +  +  +       G V+          +  +     ++  M  VGV  VP+V LI+F+ 
Sbjct: 126 IDKVLGAKELIDFTGDVLLCAAIVVRHPFSMR--WDDMLTAMRKVGVDAVPIVGLINFLL 183

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G ++A   + QL QFGA I+   L++I  +RE+G ++TA+++ GRSGSA  +EIG+MKI+
Sbjct: 184 GFIMAFMTSVQLKQFGANIYVAPLVAIAMVRELGPIMTAIVVTGRSGSAFASEIGAMKIS 243

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE+DA+ TMG + V  L+ P++ A +I +P+LT+ A    I+G  +V   + D+  + + 
Sbjct: 244 EEVDALSTMGFNPVVFLVMPKMTAAMIVMPILTVFACLFGILGGLLVGVVFLDLTLSNYL 303

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           S    + ++  +     KA   A  I  +    GF V   S+++G+  T+ VV  I ++I
Sbjct: 304 SETIDSLSMYAVNWCFFKAVVFAFLITWIGCLRGFQVKGGSSAVGEATTSSVVSGIFLII 363

Query: 359 IIDSLFAIF 367
           + D +FA  
Sbjct: 364 LWDCIFAFI 372


>gi|238751983|ref|ZP_04613468.1| ABC transporter, permease protein [Yersinia rohdei ATCC 43380]
 gi|238709817|gb|EEQ02050.1| ABC transporter, permease protein [Yersinia rohdei ATCC 43380]
          Length = 381

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 120/361 (33%), Positives = 198/361 (54%), Gaps = 6/361 (1%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72
           G+W      E+   V     ++      + DL+ +  +DT GA L+   + +      L+
Sbjct: 25  GDWVLVHYRELEPQVAQL--RANLPHGVVFDLNQLGALDTAGAALLAVLLGEERIS-HLR 81

Query: 73  GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF-KNLHYHIGKKIVKFINDSCSQAHI 131
            ++ ++ Q   ++  T  + + N +P+ +    +F   L    G+ +     D  S    
Sbjct: 82  ELAPNLPQERRVLLETVSQVLPNIEPESTEKPPAFWLELLAGTGRTVDNLWQDIKSLLGF 141

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +GL +           +++  + SLI  +  +G++ VP+++L++F+ GAVIA  GA  L+
Sbjct: 142 VGLTLETLLGTLFRPSRWR--VTSLIANVQQIGLNAVPIIMLLTFLVGAVIAFLGATVLT 199

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            FGA IF++DL+    LRE  VLLTA+++AGR+ SA  AEIG MK NEEIDAI+T+GL+ 
Sbjct: 200 TFGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNP 259

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V +L+ PR+ AL+ISLP+LT +     I G  +V     +I   +F S   ++  L +  
Sbjct: 260 VELLVLPRVLALLISLPMLTFIGMVCGIFGGMVVCALELNISPTMFLSIMQNSNGLQHFL 319

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
            G+ KAP  A  I I+   EGF V   + S+G+  TT VVQSI +VI++D++ A+F+  +
Sbjct: 320 VGISKAPIFAFLIAIIGCLEGFKVTGSAESVGEHTTTSVVQSIFVVILLDAIAALFFMEM 379

Query: 372 G 372
           G
Sbjct: 380 G 380


>gi|34558310|ref|NP_908125.1| toluene ABC transporter permease [Wolinella succinogenes DSM 1740]
 gi|34484029|emb|CAE11025.1| conserved hypothetical protein-ABC-type toluene export system,
           permease component [Wolinella succinogenes]
          Length = 366

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 101/375 (26%), Positives = 189/375 (50%), Gaps = 20/375 (5%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLS--AITEIDTIGAELI 58
           +  + +      G W      E+  +++  +  + + DS  V +S   ++ +D   A L+
Sbjct: 4   IERDLMLRLILRGQWDY----ELPKELISRLFLACKRDSVRVSVSLLGVSSLDYSAATLL 59

Query: 59  MYF---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIG 115
           +     +++  G+   +GV   I  +  ++  + R                  +    +G
Sbjct: 60  LELSMAVKRRGGEWAWEGVPPAIAPILGIVKESKRDLPAPPPS---------LSSLLRLG 110

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +KI + +      A  LG  +   G     S   +  L + +  +   G+  VP++ L S
Sbjct: 111 EKIKESLKGLGRFASFLGETLFAMGRSLKESRLIR--LKATLYHIEESGIKAVPIIALTS 168

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
           F+ G V+A QGA QL +FGA I  +++  +L LRE+G ++ A+++AGRS S+  A+IG M
Sbjct: 169 FLVGIVMAYQGAIQLEKFGASIIVVEMTGMLTLRELGPVIAAIVVAGRSASSYAAQIGVM 228

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           KI EEIDA++TM  +    L+ PR+ AL++ +PL+  L+N + ++G  ++I  Y  I + 
Sbjct: 229 KITEEIDAMKTMNFNPYAFLVIPRVIALVVVMPLVIFLSNVAGLLGEMLIIKSYLGIGYL 288

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            +  RF+    + +++ GLIKAPF    I ++    GF +   + S+G+  T  VV +I 
Sbjct: 289 QYIERFYEMVEIRHLWVGLIKAPFYGAIIALIGCFRGFQITGSTESVGRYTTISVVNAIF 348

Query: 356 IVIIIDSLFAIFYFA 370
            VI ++++F+I +  
Sbjct: 349 WVIALNAMFSIIFTE 363


>gi|304391808|ref|ZP_07373750.1| ABC transporter, membrane spanning protein [Ahrensia sp. R2A130]
 gi|303296037|gb|EFL90395.1| ABC transporter, membrane spanning protein [Ahrensia sp. R2A130]
          Length = 385

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 133/368 (36%), Positives = 212/368 (57%), Gaps = 7/368 (1%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G+ V   +G W    I E+ DD+         S   +++ +A T++DT GA LI    +
Sbjct: 23  DGVLV-TASGPWTIAFIEEVDDDI--RAFSIEGSAKLVLNTTAATQLDTSGAWLIERLRQ 79

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           +               +   L+   HR+  +  +        S++     +G+  ++F  
Sbjct: 80  RVEEAGIAFSHEDDEPRRQQLVDVIHRR--ERPETDAPTQTKSWRGPIVRLGEIGIEFGR 137

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
           D  +  +ILG  +        S    +  ++S++ Q+  +G   VPVV ++SF+ GA+IA
Sbjct: 138 DLMTALYILGSSVRGPSSNGGSGRGLR--VMSILNQIDQMGWRAVPVVFVMSFLIGAIIA 195

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           QQGA+Q+  +G E+ +I L+ IL  RE+GVLLT++M+AGRSGSAI AEIG+MK+ EEIDA
Sbjct: 196 QQGAYQMQAYGEELLAISLVGILHFREVGVLLTSIMVAGRSGSAITAEIGTMKMREEIDA 255

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           ++ MGL+ V +L+ PR+ A++I LP+LT+L+N + I+GA +V+  Y  I  + F +    
Sbjct: 256 LQVMGLNPVGVLLFPRLLAIMICLPILTLLSNIAGIMGAMVVMDIYVGITPSQFITTLTE 315

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             +  ++  GL KAP MA  IG+VA  EG  VG  S SLG++ T  VV+SI +VI++D L
Sbjct: 316 DISPRHLAVGLAKAPVMALIIGLVAAVEGLKVGGSSESLGQRTTAAVVKSIFLVIVVDGL 375

Query: 364 FAIFYFAI 371
           F IF+ A+
Sbjct: 376 FTIFFSAM 383


>gi|15965586|ref|NP_385939.1| hypothetical protein SMc00174 [Sinorhizobium meliloti 1021]
 gi|307302706|ref|ZP_07582462.1| protein of unknown function DUF140 [Sinorhizobium meliloti BL225C]
 gi|307318554|ref|ZP_07597988.1| protein of unknown function DUF140 [Sinorhizobium meliloti AK83]
 gi|15074767|emb|CAC46412.1| Probable ABC transporter [Sinorhizobium meliloti 1021]
 gi|306895894|gb|EFN26646.1| protein of unknown function DUF140 [Sinorhizobium meliloti AK83]
 gi|306903070|gb|EFN33661.1| protein of unknown function DUF140 [Sinorhizobium meliloti BL225C]
          Length = 379

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 153/370 (41%), Positives = 218/370 (58%), Gaps = 10/370 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +      + F+G+W+      +A  +      +     +  D S IT +DT GA +I  F
Sbjct: 18  AAGNGRRYVFSGDWRHETAEAMAAKLKRLEKPA--GGQSEFDFSGITRMDTAGAWIIRRF 75

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
           M     +++  G   + E + +L     R +      + +     F+ L   +G+  V  
Sbjct: 76  MNGTADEVRFTGGERYAELVRALPKQLRRPE------ESATRMPLFQRLFTPVGELTVSI 129

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             D+ +   ILG  +   G              +++ Q+  +GV   P++ L+SF+ GA+
Sbjct: 130 WTDTVAAMFILGSAVR--GAQMKLGRHAGVSPAAIVHQIDRMGVMATPIITLMSFLIGAI 187

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IAQQGAFQL  FGAEIF +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EE+
Sbjct: 188 IAQQGAFQLRSFGAEIFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREEV 247

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA++ MGL  V +L+ PR+ AL I LPLLTI+ANF+A+ GA++V W Y DI    F +R 
Sbjct: 248 DALKVMGLSPVGVLVFPRLVALTIVLPLLTIIANFAALAGAAMVAWTYSDITIPTFLARL 307

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                 +++  G+IKAPFMA  IG+VA  EG  VG  + SLG++VT+ VV+SI +VI+ID
Sbjct: 308 QEAVDFSSVAAGMIKAPFMALIIGVVAAVEGLKVGGSAESLGRRVTSSVVKSIFVVILID 367

Query: 362 SLFAIFYFAI 371
            LFA+FY AI
Sbjct: 368 GLFAMFYAAI 377


>gi|256828281|ref|YP_003157009.1| protein of unknown function DUF140 [Desulfomicrobium baculatum DSM
           4028]
 gi|256577457|gb|ACU88593.1| protein of unknown function DUF140 [Desulfomicrobium baculatum DSM
           4028]
          Length = 380

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 105/356 (29%), Positives = 184/356 (51%), Gaps = 17/356 (4%)

Query: 16  KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEKYHGKIKLQ 72
            +PEI +    + + + + I++     DLS +T +D  GA +I+      EK    +K+ 
Sbjct: 34  TTPEIMDRLAQLPLPLPRRIRA-----DLSGVTRMDDCGALVILQLRRMAEKNGCDLKMH 88

Query: 73  GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHIL 132
           G   H+++L   +            PQ      +  +     G K +   N + +    +
Sbjct: 89  GTPGHVQELLDFLRLDD-------PPQSVGIKRAKPDFMTRFGIKTLDVTNQAVTHVSFV 141

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G V+           + +  L   +  M  VGV  +P+V LISF+ G ++A   A QL Q
Sbjct: 142 GEVVVTLLSLLRHPDRLR--LGDTVLYMQRVGVDALPIVGLISFLLGLIMAFMSAVQLQQ 199

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
           FGA I+   L+++  +RE+G ++TA+++AGRSGSA  AEIG+MK++EE+DA+ TMG    
Sbjct: 200 FGANIYVASLVALAMVRELGPIMTAILVAGRSGSAFAAEIGTMKVSEEVDALVTMGFKPA 259

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
             L++P+I A ++ +PLL + +N  AI G  ++     D+    + ++  +T ++ +I  
Sbjct: 260 MFLVAPKIIASVLVVPLLAMYSNLFAIAGGLLIGVTTLDLTVNAYMAQTMNTLSIFDINW 319

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           GL K+   A  I  V   +G+ V   + S+G+  T+ VV  I +VI++DS+ A+  
Sbjct: 320 GLFKSAIFAVLIATVGCFKGYQVRGGAASVGQATTSAVVTGIFLVILVDSILAVIL 375


>gi|285019443|ref|YP_003377154.1| ABC transporter permease [Xanthomonas albilineans GPE PC73]
 gi|283474661|emb|CBA17160.1| probable abc transporter permease protein [Xanthomonas albilineans]
          Length = 405

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 119/366 (32%), Positives = 197/366 (53%), Gaps = 13/366 (3%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
           +  R  G+W           V   + +S+ + +  +D S I ++D+ G   ++ +  +  
Sbjct: 52  SRVRLTGSWTLSTAL-----VASEVLRSMPAGTTGIDASGIAQLDSAGVLQLIRYATRNG 106

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
              +          L S I       + + +P+R   Y  F      +G  + +   +  
Sbjct: 107 IAQESLDFRQDHRALVSTIE-----DVADDRPKRKRDYG-FAAALERLGYTVHRNGKEIV 160

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +    LG  +        +  +F+  L S +  M  VG+  VP+V L+S++ GAVIA  G
Sbjct: 161 ALVGFLGETLVKLMRLMHAPRRFR--LTSTVHHMEQVGLDAVPLVALLSYLVGAVIAFLG 218

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           +  L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EEIDAI+T
Sbjct: 219 STVLRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKAREEIDAIQT 278

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +GLD + +L+ PR+ AL++ LPLLT +A  + + G   V      IP  ++ +R H T  
Sbjct: 279 LGLDPMDLLVIPRLLALLLMLPLLTFVAMIAGLAGGVTVGAFDLGIPPQMYLARMHDTIQ 338

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           + ++  GL KAP  A AIG++   EG  V   + S+G++ T+ VVQ+IS+VIIID++ A+
Sbjct: 339 IRHMLVGLAKAPIFAIAIGLIGCLEGLRVEGTAQSVGERTTSSVVQTISLVIIIDAIAAL 398

Query: 367 FYFAIG 372
           ++  +G
Sbjct: 399 WFMKMG 404


>gi|330501346|ref|YP_004378215.1| hypothetical protein MDS_0432 [Pseudomonas mendocina NK-01]
 gi|328915632|gb|AEB56463.1| hypothetical protein MDS_0432 [Pseudomonas mendocina NK-01]
          Length = 381

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 120/373 (32%), Positives = 201/373 (53%), Gaps = 9/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S +  +  R  G+W     S++   V+    +        VDL  +  +DT GA L++  
Sbjct: 15  STDAASGLRLGGDWTLAHYSQLEPQVLALRERL--HGKESVDLGDLAALDTAGAALLVEL 72

Query: 62  M--EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
              E+    I+   +      L   ++         Q    +   +  + +  HIG+ + 
Sbjct: 73  FGSERLRQLIQQAELDERRRALLLTVADAMAGSAPAQA---ASEPSVLREVLGHIGEVVE 129

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
              +   +    +GL +++         +++  L SL   +   G++ VP+V L++F+ G
Sbjct: 130 GMWHQGRALLGFMGLTLTSMLAILVRPMRWR--LTSLAAHLEQCGLNAVPIVALLTFLVG 187

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           AV+A  GA  L+ FGA I++++L++   LRE GVLLTA+++AGR+ SA  A+IGSMK NE
Sbjct: 188 AVVAFLGATILADFGATIYTVNLVAFSFLREFGVLLTAILMAGRTASAFTAQIGSMKANE 247

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDAIRT+GL  + +L+ PR++A++I+LP+LT +A  S I+G  +V     DIP  ++ S
Sbjct: 248 EIDAIRTLGLSPIELLVLPRVFAMLIALPILTFIAMLSGIVGGGLVCAVSLDIPVTMYLS 307

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
               +  L +   GL+KAP  A  I ++   EGF V   + S+G+  T+ VVQSI +VI+
Sbjct: 308 ILQDSDLLRHFLVGLLKAPIFAFLIALIGCLEGFKVSGSAQSVGEHTTSAVVQSIFVVIL 367

Query: 360 IDSLFAIFYFAIG 372
           +D+L A+F   +G
Sbjct: 368 LDALAALFLMEMG 380


>gi|298292077|ref|YP_003694016.1| hypothetical protein Snov_2101 [Starkeya novella DSM 506]
 gi|296928588|gb|ADH89397.1| protein of unknown function DUF140 [Starkeya novella DSM 506]
          Length = 382

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 129/372 (34%), Positives = 202/372 (54%), Gaps = 12/372 (3%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAIN--KSIQSDSAIVDLSAITEIDTIGAEL---IMYF 61
            VF   G W + +   +   V  A+   K    ++A +DLS +   DT+GA +   ++  
Sbjct: 18  LVFVGNGRWVAGQGRALEGGVDTALAELKVGAVETARLDLSGVRGFDTVGAVMVDRLLRA 77

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
           +E    + ++ G+      L   I      K  +  P R    N+       +G+ +V  
Sbjct: 78  LEVAGVRFQIVGLERRFRPLLDEI-----VKGSHDVPPRRHHVNAVIGGIQLVGQTVVNT 132

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             DS      +G V++           F+G   S++  +   G+  VP++ LI+F+ G +
Sbjct: 133 GRDSLVFLSFIGAVVAALLRVIVRPQTFRG--TSMVYHLERTGLRAVPIIALITFLIGCI 190

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IAQQG F   +FGA  + +D++ IL LRE+GVL+ ++M+AGRSGSA  AE+GSM++ EE+
Sbjct: 191 IAQQGIFHFRKFGATTYVVDMVGILTLRELGVLIVSIMVAGRSGSAFTAELGSMRMREEV 250

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+R MG D   +L+ PR+ ALII++PLLT + N  A+ G  +V W Y  I   +F +R 
Sbjct: 251 DALRVMGFDPNEVLVLPRLVALIIAVPLLTFIGNMCALFGGGLVAWLYGGISPEIFLNRL 310

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                L     G+IKAPFMA  +G++A  EG  VG  + SLG   T  VV++I +VI++D
Sbjct: 311 QEAIALNTFEVGMIKAPFMAAIVGLIACMEGMRVGGSAESLGAHTTAAVVKAIFLVIVVD 370

Query: 362 SLFAIFYFAIGI 373
            LFA+F+ AI +
Sbjct: 371 GLFAMFFAAIDM 382


>gi|311694463|gb|ADP97336.1| ABC transporter, permease protein [marine bacterium HP15]
          Length = 388

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 105/365 (28%), Positives = 187/365 (51%), Gaps = 5/365 (1%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
                G+W       ++       ++ +      ++LS +T IDT GA  +   +     
Sbjct: 28  TLSVNGDWLLSHYRSLSSLASSMSSRDL--IKLSINLSGLTRIDTAGASQLASLIGPERL 85

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
                  S    +  +LI+      +KNQ        +   +     G+K+         
Sbjct: 86  LEAASADSELPRETSALIAAVCE-AMKNQPEADRRSPSLVWSFVTGTGQKVESIFRLLWI 144

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +G  +          ++++  +   +  ++  G++ +P+V L++F+ GAV+A  GA
Sbjct: 145 LVGFIGQTLGTLAWNLPRPWRWR--MTPFVAAVHDTGLNALPIVALLTFLVGAVVAFLGA 202

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L  FGA I++++L++   LRE GVLL A+++AGR+ SA  A IG+MK+NEE+DAIRT+
Sbjct: 203 TVLDDFGATIYTVNLVAFSFLREFGVLLAAILLAGRTASAFTAHIGAMKVNEELDAIRTL 262

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GL+ + +L+ PR+ A+++SLP+LT +   S ++G ++V     DI    F +       L
Sbjct: 263 GLNPIELLVLPRVMAMMVSLPILTFVGMISGMVGGAMVCALVLDITPTQFMAIVERDIAL 322

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   G++KAP  A  I ++   EGF V   + S+G+  T+ VVQSI +VI++DS+ A+F
Sbjct: 323 QHFVVGIVKAPIFAFLIAVIGCLEGFKVAGSAQSVGEHTTSSVVQSIFMVILLDSIAALF 382

Query: 368 YFAIG 372
           +  +G
Sbjct: 383 FMEMG 387


>gi|300917987|ref|ZP_07134613.1| conserved hypothetical protein [Escherichia coli MS 115-1]
 gi|300414813|gb|EFJ98123.1| conserved hypothetical protein [Escherichia coli MS 115-1]
          Length = 381

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 114/365 (31%), Positives = 189/365 (51%), Gaps = 6/365 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
               G+W       +   V     ++      + DL+ +  +DT     ++  +      
Sbjct: 21  VYIRGDWVLAHYCVLEPRVAQL--RANMPSGGVFDLNQLGALDTA-GATLLALLLGEDRV 77

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF-KNLHYHIGKKIVKFINDSCS 127
             L+ ++  + +   ++  T    + +  P+ S     F   +  + G+ +     D  S
Sbjct: 78  ANLRELAPKLPEERRILLETVSHVLPDLTPELSEKPTRFWLEMLANTGRSVDNLWQDIKS 137

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +GL +           +++  + SLI  +  +G++ VP+++L++F+ GAVIA  GA
Sbjct: 138 LLGFIGLALETLLGTLFRPSRWR--ITSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGA 195

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L+ FGA IF++DL+    LRE  VLLTA+++AGR+ SA  AEIG MK NEEIDAI+T+
Sbjct: 196 TVLTTFGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTL 255

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GL+ V +L+ PR+ AL+ISLP+LT +     I G  +V     DI   +F S   ++  L
Sbjct: 256 GLNPVELLVLPRVLALLISLPMLTFIGMVCGIFGGMVVCALTLDISPTMFLSIMQNSNGL 315

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   G+ KAP  A  I I+   EGF V   + S+G   TT VV SI +VI++D++ A+F
Sbjct: 316 QHFLVGISKAPIFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALF 375

Query: 368 YFAIG 372
           +  +G
Sbjct: 376 FMEMG 380


>gi|238791990|ref|ZP_04635626.1| ABC transporter, permease protein [Yersinia intermedia ATCC 29909]
 gi|238728621|gb|EEQ20139.1| ABC transporter, permease protein [Yersinia intermedia ATCC 29909]
          Length = 381

 Score =  278 bits (712), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 115/367 (31%), Positives = 186/367 (50%), Gaps = 10/367 (2%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EKY 65
               G+W       +   V     ++      + DL+ +  +DT GA L+   +      
Sbjct: 21  VYIRGDWVLAHYCVLEPRVAQL--RANMPSGGVFDLNQLGALDTAGATLLALLLGEDRVA 78

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
           + +     +      L   +S            + + F   +  +  + G+ +     D 
Sbjct: 79  NLRELAPKLPEERRILLETVSHVLPDLTPELSEKPARF---WLEMLANTGRSVDNLWQDI 135

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            S    +GL +           +++  + SLI  +  +G++ VP+++L++F+ GAVIA  
Sbjct: 136 KSLLGFIGLALETLLGTLFRPSRWR--ITSLIANIQQIGLNAVPIIMLLTFLVGAVIAFL 193

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           GA  L+ FGA IF++DL+    LRE  VLLTA+++AGR+ SA  AEIG MK NEEIDAI+
Sbjct: 194 GATVLTTFGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQ 253

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           T+GL+ V +L+ PR+ AL+ISLP+LT +     I G  +V     DI   +F S   ++ 
Sbjct: 254 TLGLNPVELLVLPRVLALLISLPMLTFIGMVCGIFGGMVVCALTLDISPTMFLSIMQNSN 313

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            L +   G+ KAP  A  I I+   EGF V   + S+G   TT VV SI +VI++D++ A
Sbjct: 314 GLQHFLVGISKAPIFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAA 373

Query: 366 IFYFAIG 372
           +F+  +G
Sbjct: 374 LFFMEMG 380


>gi|78777725|ref|YP_394040.1| hypothetical protein Suden_1528 [Sulfurimonas denitrificans DSM
           1251]
 gi|78498265|gb|ABB44805.1| conserved hypothetical protein [Sulfurimonas denitrificans DSM
           1251]
          Length = 373

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 106/370 (28%), Positives = 188/370 (50%), Gaps = 8/370 (2%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +     +F G      + +   ++        + ++ ++DL  ++ +D+ G+  +    +
Sbjct: 12  DNKLSLKFKGELTLYNLMKYKKEIDKIAFS--KENAVVIDLLELSFLDSAGSIFLNNLQK 69

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           +   K     ++ H   +  ++     +KI      +       +N    IG+K  K   
Sbjct: 70  ELELKELKVDITCHNRDVLDMLELIRVQKITL----KKIAKKKKRNRVEKIGEKSYKAYL 125

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
              S    +G + S+   +  S    +     +  +M    +  + ++ L SF+ G V+A
Sbjct: 126 GILSFMAFMGELFSHKLRYLISFKNIRH--KEIAFEMNECAIKALGIISLTSFLIGVVVA 183

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
            Q A+QL  +GA IF +D++ +  LRE+  L+TA++IAGRSGSA  A+IG+MKI +E+DA
Sbjct: 184 YQSAYQLKLYGANIFIVDMLGLSILRELSPLITAIVIAGRSGSAFTAQIGAMKITQELDA 243

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           ++TMG D  R L+ P+I AL+I++PLL  +++  AIIG  IV     +I   +F  RF+ 
Sbjct: 244 MQTMGFDPYRFLVVPKIIALMITMPLLIFVSDIMAIIGGMIVANLDLNITVDMFLDRFNE 303

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              + +   G+ K PF A  I  +A+ +G  V   + S+G   T  VV+SI  VII D++
Sbjct: 304 VINIKHFIVGISKGPFFAFLIATIAIYQGLLVKDDTQSIGLNTTKSVVESIFAVIICDAI 363

Query: 364 FAIFYFAIGI 373
           F+I +  +GI
Sbjct: 364 FSIAFTNLGI 373


>gi|146280488|ref|YP_001170641.1| ABC transporter permease [Pseudomonas stutzeri A1501]
 gi|145568693|gb|ABP77799.1| probable permease of ABC transporter [Pseudomonas stutzeri A1501]
          Length = 362

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 115/366 (31%), Positives = 191/366 (52%), Gaps = 11/366 (3%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           R  G+W     + +  +V     +    + + ++LS +  +DT GA L+   +    G  
Sbjct: 4   RIVGDWTLAHYAALRREVQRLRARI--DERSQIELSGLGALDTAGAGLLAELL----GPE 57

Query: 70  KLQGVSTHIEQLFS---LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
           ++  +     QL +    +  T    +       S     F  +  HIG+ +        
Sbjct: 58  RIAAIEAWAPQLPAERLALLRTVATALDQPDAAESPRGYEFGYVLAHIGRTVAAVWKQQR 117

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +    +GL +           +++  L SL   +   G+  VP+V L++F+ GAV+A  G
Sbjct: 118 ALLGFIGLTLQTLLLTLPRPRRWR--LTSLAVHIEQTGLDAVPIVALLTFLVGAVVAFLG 175

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A  L+ FGA I++++L+    LRE GVLL A+++AGRS SA  A+IGSMK NEEIDAIRT
Sbjct: 176 ATVLADFGATIYTVNLVGFSFLREFGVLLAAILLAGRSASAFAAQIGSMKSNEEIDAIRT 235

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +GL  + +L+ PR+ A++I+LP+LT +   S I G  +V     DI   +FF+       
Sbjct: 236 LGLSPIELLVLPRVLAMLITLPILTFVGMLSGIAGGLVVCVLALDISPTMFFNIMARDIA 295

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           +++   GL KAP  A  I ++   EGF V   + S+G+  T+ VVQ+I +VI++D++ A+
Sbjct: 296 VSHFLVGLGKAPVFAFVIAVIGCLEGFKVTGSAQSVGEHTTSSVVQAIFMVILLDAIAAL 355

Query: 367 FYFAIG 372
           F+  +G
Sbjct: 356 FFMEMG 361


>gi|323524591|ref|YP_004226744.1| hypothetical protein BC1001_0219 [Burkholderia sp. CCGE1001]
 gi|323381593|gb|ADX53684.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1001]
          Length = 389

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 95/370 (25%), Positives = 169/370 (45%), Gaps = 16/370 (4%)

Query: 8   VFRFAGNWKSPEISEIADD---VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-FME 63
           + R +G W +  ++        +    +          DLS I  +D +G + +   +  
Sbjct: 31  IVRLSGQWTALALARDRATGHVIPQLRSLEGAEGIGQWDLSRIDRMDHVGGQALWRVWGH 90

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           +     +L      I +  +L+           +                +G  I  F+ 
Sbjct: 91  RMPPDTELTDTQRDIFERIALLDTVRETAEPVVRFDP----------FTRLGLAIFSFLE 140

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                  + G V+ +                 +   +Y  G   +P+  L++F+ G V++
Sbjct: 141 HLYGGVAMFGRVVLDLLAIARKPAI--TPWTEISANVYNAGTKALPITALVAFLIGIVLS 198

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
              A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA
Sbjct: 199 YLSAQQLRLFGANQYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDA 258

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R MG+     LI PR+ AL +++PLL +  N  A+ G ++       I  + F      
Sbjct: 259 MRVMGIPHGLRLILPRVVALGVAMPLLVMWTNIIALTGGALAAKIVLGIDMSYFARALPG 318

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              +AN++ GL K       I IV    GF +  +S SLG+  T+ VV SI+IVI+ D++
Sbjct: 319 VVPVANLWIGLGKGVAFGMLIAIVGCHFGFRIKANSQSLGEGTTSSVVTSITIVILADAV 378

Query: 364 FAIFYFAIGI 373
           FAI +  +G+
Sbjct: 379 FAILFQNVGL 388


>gi|305432464|ref|ZP_07401626.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Campylobacter coli JV20]
 gi|304444503|gb|EFM37154.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Campylobacter coli JV20]
          Length = 371

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/373 (30%), Positives = 184/373 (49%), Gaps = 16/373 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            EN + +F   G W    +S+I    +  +   I   + I D S + EID  G    +  
Sbjct: 10  EENKVFIF---GIWDKTSVSKIK---IKDLLSQISQTNCIFDFSQLNEIDMAGVRFFLAL 63

Query: 62  ---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
              ++K    I  QG++T  + LF L    +++  + Q+ + +     F +    +G   
Sbjct: 64  EHDLKKNDILILKQGLNTRFKSLFELCEKNYQRINEKQEKKFN-----FTDFFISLGILS 118

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
              +       +  G   ++      +   F+   +S +  +       +P+VIL + + 
Sbjct: 119 FDLLKILQKFINFTGAFFTSLFLCIKNPKNFR--FISFLYHIENSAFKALPIVILTALLV 176

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G V+A Q A+QL+QFGA IF +DL+ I   RE+  L+ A++IAGRS S+  A+IG MKI 
Sbjct: 177 GVVLAYQAAYQLAQFGANIFIVDLVGISATRELAPLIAAIVIAGRSASSYTAQIGVMKIT 236

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           +EI+A+ TMG      +I PR+ AL+I++PL+  L++  +I+G  +V     DI F  F 
Sbjct: 237 DEINAMNTMGFRSFEFIIIPRVMALVIAMPLIVALSDAISILGGMVVAKINLDISFGEFL 296

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
            RF     + +I  GL KAP     IG++A   GF V   + S+G   T  VV +I  VI
Sbjct: 297 RRFREAVEMKHIIIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVI 356

Query: 359 IIDSLFAIFYFAI 371
             D+LF++    +
Sbjct: 357 AFDALFSVVLTIM 369


>gi|126666401|ref|ZP_01737380.1| ABC transporter, permease protein, putative [Marinobacter sp.
           ELB17]
 gi|126629202|gb|EAZ99820.1| ABC transporter, permease protein, putative [Marinobacter sp.
           ELB17]
          Length = 387

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 110/360 (30%), Positives = 192/360 (53%), Gaps = 4/360 (1%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72
           G+W  P    +   V  A   S +     ++L  +  IDT GA L+   +  ++ +  L 
Sbjct: 31  GDWTLPYYHALYSSVTAAGQDSDRYQ--TLNLQTLGRIDTAGAALLAELVGPHNLEQWLA 88

Query: 73  GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHIL 132
                + +  + +       + +Q+P  +    +   L   +G  + +      +    +
Sbjct: 89  DNPQAVSRETAALLSAVATAMADQQPLPAPPGFTLSGLVRDVGAWVNELYQLVVTLIGFI 148

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G +I+          +++  + + +  +   G++ VP+V L++F+ GAV+A  GA  L+ 
Sbjct: 149 GQIIAALAWTTLHPRRWR--MTAFVAAVQDTGLNAVPIVALLTFLVGAVVAFLGATVLAD 206

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
           FGA I++++L++   LRE GVLL A+++AGR+ S+  A+IG+MK+NEE+DA+RT+GL  +
Sbjct: 207 FGATIYTVNLVAFSFLREFGVLLAAILLAGRTASSFTAQIGAMKVNEELDALRTLGLSPI 266

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
            +L+ PR+ A+++SLPLLT +   S ++G ++V     DI    F S       L ++  
Sbjct: 267 ELLVLPRVLAMMVSLPLLTFVGMISGMVGGALVCSMTLDITPTQFISIVSQDVALKHLLV 326

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           GL KAP  A  I  VA  EGF V   + S+G   T+ VVQSI +VI+ DS+ A+F+  +G
Sbjct: 327 GLSKAPIFAFLIAAVACLEGFKVSGSAQSVGVHTTSSVVQSIFMVILFDSIAALFFMEMG 386


>gi|301062341|ref|ZP_07203004.1| conserved hypothetical protein [delta proteobacterium NaphS2]
 gi|300443545|gb|EFK07647.1| conserved hypothetical protein [delta proteobacterium NaphS2]
          Length = 390

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 91/376 (24%), Positives = 182/376 (48%), Gaps = 12/376 (3%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           +SE      +F G+W           ++  ++          D   ++  D+     +  
Sbjct: 24  LSEQKTLQIKFQGDWILENKRPSISALIKQMDSEAAVRQITFDTLGLSRWDSALLICLTK 83

Query: 61  FMEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
            +EK   K   +  +G+     +L  L S    KK  ++K       N   +  + +G +
Sbjct: 84  IIEKASQKDIPLDGKGLPEGAFKLLDLASTVPEKKGVHKK-------NGRPSFLFQVGSE 136

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
            V F N        +G   +   +F     +F+     L+R +   G+  +P+V LIS +
Sbjct: 137 SVAFFNSFLEALGFVGEAFNAFSKFLTGKARFRR--SDLMRIIQDCGIEALPIVSLISLL 194

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G ++A  GA QL+ FGA+I+  +L+ I  +R +G ++  +++AGR+G+A  A++G+M++
Sbjct: 195 VGLILAFVGAVQLTMFGAQIYVANLVGIAMVRVMGAVMAGIIMAGRTGAAFAAQLGTMQV 254

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
           NEEIDA +TMG+  +  L+ PR+ AL + +PLL + A+   I+G  IV     D+    +
Sbjct: 255 NEEIDAFKTMGISPMEFLVLPRMLALTLMMPLLCLYADLMGILGGFIVGVGMLDLNMMEY 314

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
           +++  +  TL++++ G++++      + +     G   G  ++++G   T+ VV  I  +
Sbjct: 315 YNQTKAAVTLSDLWIGIVQSAVFGMLVALAGCLRGMQCGRSASAVGDATTSAVVTGIVSI 374

Query: 358 IIIDSLFAIFYFAIGI 373
           I+  ++  +    +GI
Sbjct: 375 IVATAVITVITNMMGI 390


>gi|57168794|ref|ZP_00367925.1| conserved hypothetical integral membrane protein [Campylobacter
           coli RM2228]
 gi|57019841|gb|EAL56524.1| conserved hypothetical integral membrane protein [Campylobacter
           coli RM2228]
          Length = 371

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/373 (30%), Positives = 184/373 (49%), Gaps = 16/373 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            EN + +F   G W    +S+I    +  +   I   + I D S + EID  G    +  
Sbjct: 10  EENKVFIF---GIWDKTSVSKIK---IKDLLSQISQTNCIFDFSQLNEIDMAGVRFFLAL 63

Query: 62  ---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
              ++K    I  QG++T  + LF L    +++  + Q+ + +     F +    +G   
Sbjct: 64  EHDLKKNDILILKQGLNTRFKSLFELCEKNYQRINEKQEKKFN-----FTDFFISLGILS 118

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
              +       +  G   ++      +   F+   +S +  +       +P+VIL + + 
Sbjct: 119 FDLLKILQKFINFTGTFFTSLFLCIKNPKNFR--FISFLYHIENSAFKALPIVILTALLV 176

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G V+A Q A+QL+QFGA IF +DL+ I   RE+  L+ A++IAGRS S+  A+IG MKI 
Sbjct: 177 GVVLAYQAAYQLAQFGANIFIVDLVGISATRELAPLIAAIVIAGRSASSYTAQIGVMKIT 236

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           +EI+A+ TMG      +I PR+ AL+I++PL+  L++  +I+G  +V     DI F  F 
Sbjct: 237 DEINAMNTMGFRSFEFIIIPRVMALVIAMPLIVALSDAISILGGMVVAKINLDISFGEFL 296

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
            RF     + +I  GL KAP     IG++A   GF V   + S+G   T  VV +I  VI
Sbjct: 297 RRFREAVEMKHIIIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVI 356

Query: 359 IIDSLFAIFYFAI 371
             D+LF++    +
Sbjct: 357 AFDALFSVVLTIM 369


>gi|167647526|ref|YP_001685189.1| hypothetical protein Caul_3564 [Caulobacter sp. K31]
 gi|167349956|gb|ABZ72691.1| protein of unknown function DUF140 [Caulobacter sp. K31]
          Length = 371

 Score =  277 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 113/372 (30%), Positives = 197/372 (52%), Gaps = 11/372 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
              G      +G+W +  + +  + ++ A++    SD+  +DL  ++  DT GA  I+  
Sbjct: 11  DHEGRKTVMLSGDWTARGMVDAGERLITALD---GSDAVDLDLRDLSRCDTAGAYAIIRA 67

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
            +       ++  S  + +L  L+    + + +   PQ+      F+ L   IG+ +   
Sbjct: 68  ADGRVSAGHIKANSRTL-RLLQLVGDAIQVEPEAAPPQK-----GFQALLERIGRGVYGL 121

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
            +D       LG ++   G   A   + +     ++      G+  +P+V + +F  GAV
Sbjct: 122 GDDLYGTLGFLGHLLVAIGRCIAKPSRIR--WAPVVALAERSGLDAIPIVAVTTFFIGAV 179

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A  GA  L+QFGA++F+++L+ I  LRE  +L+TA+++AGRS S+  AEIGSMK+N+EI
Sbjct: 180 VALLGANLLTQFGAQVFAVELIGISVLREFNILITAILLAGRSASSFAAEIGSMKMNQEI 239

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA++ MG+D    L+ PR  AL+I++PLLT +A  + + G  +V W   D+    F  R 
Sbjct: 240 DAMQVMGVDPYEALVLPRFAALLITIPLLTFIATLAGLAGGMLVTWAVLDLSPTFFLQRM 299

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
             +  + + + GL KAP MA  I  +  ++G  VG    SLG++VT  VV +I  +I ID
Sbjct: 300 QDSVGVQHYWIGLSKAPVMAMVIAAIGCRQGMEVGNDVESLGRRVTAAVVHAIFAIIAID 359

Query: 362 SLFAIFYFAIGI 373
           ++FA+ Y  + +
Sbjct: 360 AVFALIYMELDL 371


>gi|134096148|ref|YP_001101223.1| putative transmembrane protein [Herminiimonas arsenicoxydans]
 gi|133740051|emb|CAL63102.1| Conserved hypothetical protein, putative ABC transporter
           [Herminiimonas arsenicoxydans]
          Length = 374

 Score =  277 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 96/373 (25%), Positives = 182/373 (48%), Gaps = 13/373 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIA--DDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
           + N       AG+W+   ++       +   +  + ++++   DLS IT +D IGA+L+ 
Sbjct: 12  TPNDNATATAAGSWQVRALAAPETMAAITAVLQTAGKAETVHWDLSQITALDYIGAQLLW 71

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
                  GK +   ++   +     +       ++ +KP + ++Y+        + +   
Sbjct: 72  ----NAWGKKRPAQLTLAPQHADFFLRLEQTGPLEWKKPPQKYWYS-----LTSLLQLKH 122

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
             ++       ++G +  + G F       +G    +   +++ G   + +  L+ F+ G
Sbjct: 123 NILDHLLGFISLIGQLTMDIGRFAREPQ--RGPWKEISANIFHAGYQALGITALVGFLIG 180

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V++   A QL QFG ++F ++++ +  +RE+G LL A+++AGRSGS+I A++G M++ E
Sbjct: 181 VVLSYLSAQQLHQFGGDVFLVNILGMSVIRELGPLLAAILVAGRSGSSITAQLGVMRVTE 240

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DA+  MGL     L+ P++ AL I++PLL +  +  A+IG          + +  F  
Sbjct: 241 ELDAMLVMGLPHGYRLVMPKVIALAIAMPLLVVWTDAMALIGGMAAANLELGLSYKYFIR 300

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                  LAN + GL K       I +VA   G  +  ++ SLG   T  VV +I+IVI+
Sbjct: 301 ELPDAVPLANYWIGLGKGVVFGALIALVACHFGLRIKPNTESLGAGTTISVVSAITIVIL 360

Query: 360 IDSLFAIFYFAIG 372
            D+LFAI +  +G
Sbjct: 361 ADALFAIIFSKVG 373


>gi|28974221|gb|AAO64222.1| putative ABC transport system permease protein Cf0016
           [Campylobacter fetus]
          Length = 367

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 175/345 (50%), Gaps = 13/345 (3%)

Query: 29  MAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFT 88
            ++ +        +DL  +  ID   A        K++   KL   +   +++F+L+S  
Sbjct: 36  KSLKELRSLKVDTLDLKNLIRIDYSAATFF----AKHYNCPKLINSNDKFDKIFALVSDK 91

Query: 89  HRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYK 148
           +   ++  K ++S       NL   IGK I+   N+  S    LG  + N  +   + + 
Sbjct: 92  YILNLQIIKFKKS-------NLIEQIGKNIINLKNELVSFCIFLGEFLFNLTKSLLNPFT 144

Query: 149 FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL 208
            +     L    Y  G+S V +V L SF+ G V+A QGA  L  FGA I+ +D+M I+ L
Sbjct: 145 VR--FKELSNHFYSAGISAVFIVCLTSFLIGIVLAYQGATMLENFGASIYVVDIMGIMTL 202

Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268
           RE+G L+ A+++AGRS S+  A+IG MKI +E++A++TMG +  R ++ P  +       
Sbjct: 203 REVGPLIAAIVVAGRSASSYTAQIGVMKITDELEAMKTMGFEPFRFIVMPACFGSYFGYA 262

Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328
             +I +      G  +V   Y D+ F+ +  RF S+  L + + GL KAPF    I ++ 
Sbjct: 263 FYSIFSKRGKYFGQMMVCNWYLDLSFSDYLERFRSSIALRHFWVGLFKAPFFGAVIALIG 322

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
            K GF V   +NS+G+  T  VV +I  +I +D++F+I Y  + I
Sbjct: 323 CKRGFEVSGSTNSVGELTTRSVVNAIFWIIALDAIFSIIYTELKI 367


>gi|238754554|ref|ZP_04615908.1| ABC transporter, permease protein [Yersinia ruckeri ATCC 29473]
 gi|238707185|gb|EEP99548.1| ABC transporter, permease protein [Yersinia ruckeri ATCC 29473]
          Length = 343

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 113/336 (33%), Positives = 175/336 (52%), Gaps = 2/336 (0%)

Query: 37  SDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96
             S   DLS +  +DT GA L+   +         +      ++   L+    +      
Sbjct: 9   PASITFDLSQLGRLDTAGATLLATLLGGERISHLRELAPLLPDERRILLETVSQVLPNLA 68

Query: 97  KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156
                     +  L   IG+ +     D  S     GL +           +++  + SL
Sbjct: 69  SQPTVKPPPFWIGLLVPIGQSVDNLWQDFKSLLGFTGLTLEALFGTVFRPSRWR--MTSL 126

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I  +  +G++ VP+++L++F+ GAVIA  GA  L+ FGA IF++DL+    LRE  VLLT
Sbjct: 127 IANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTTFGAGIFTVDLVVFSFLREFAVLLT 186

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A+++AGR+ SA  AEIG MK NEEIDAI+T+GL+ V +L+ PR+ AL+ISLP+LT +   
Sbjct: 187 AILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPVELLVLPRVLALLISLPMLTFIGMV 246

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
             I G  +V     +I   +F S   ++  L +   G+ KAP  A  I I+   EGF V 
Sbjct: 247 CGIFGGMVVCALALNISPTMFLSIMQNSNGLQHFLVGISKAPIFAFLIAIIGCLEGFKVS 306

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
             + S+G   TT VV SI +VI++D++ A+F+  +G
Sbjct: 307 GSAESVGIHTTTSVVHSIFVVILLDAVAALFFMEMG 342


>gi|121603099|ref|YP_980428.1| hypothetical protein Pnap_0182 [Polaromonas naphthalenivorans CJ2]
 gi|120592068|gb|ABM35507.1| protein of unknown function DUF140 [Polaromonas naphthalenivorans
           CJ2]
          Length = 382

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 92/372 (24%), Positives = 182/372 (48%), Gaps = 20/372 (5%)

Query: 11  FAGNWKSP---------EISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
             G W +           ++     +      S    +    LS + ++D +GA+++   
Sbjct: 22  LQGAWTAANLTQKPLWDALAAQLKALRAQTASSASPAALRWSLSPLEKLDYLGAQVLWSA 81

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
              +       G+    EQ  +++    +  ++   P R  +          +G++++  
Sbjct: 82  WNHHW----PAGLQIEPEQ-RAMLETVEKFTVRPLPPPRPSWLEPVL----MLGERLLSL 132

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           ++ +     +LG ++ + G       +  G    L   +Y  G + +P+  L+ F+ G V
Sbjct: 133 LSHAKGMLRLLGQLLLDMGRLVRHPQQ--GPWRDLSGHLYNFGATALPITALVGFLIGVV 190

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A   + QL QFGA+ F ++++ I  +RE+G +L A++IAGRSGSAI A+IG M++ EE+
Sbjct: 191 LAYLISQQLRQFGADAFIVNILGISLIRELGPVLAAILIAGRSGSAITAQIGVMRVTEEL 250

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+R MG+     L+ PR  AL + +PL+++    +A++G  +       +  + FF+  
Sbjct: 251 DAMRVMGIARGFRLVMPRAMALALVMPLISVWTTIAALLGGMLAADISMGVTPSFFFNAL 310

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            +   ++N+     K+      I ++    G  V  ++ SLG+  T  VV SI++VI++D
Sbjct: 311 PAAVKVSNLVLATAKSVVFGLLIALIGCHYGLRVKPNTESLGQGTTASVVTSITVVILVD 370

Query: 362 SLFAIFYFAIGI 373
           +LFA+ + ++GI
Sbjct: 371 ALFAVLFKSVGI 382


>gi|237747194|ref|ZP_04577674.1| ABC transport system permease [Oxalobacter formigenes HOxBLS]
 gi|229378545|gb|EEO28636.1| ABC transport system permease [Oxalobacter formigenes HOxBLS]
          Length = 374

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 94/370 (25%), Positives = 179/370 (48%), Gaps = 13/370 (3%)

Query: 5   GITVFRFAGNWKSPEISE--IADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           G T     GNW+   ++   + + +   +    +  S   DL+ I E+D IGA+L+    
Sbjct: 15  GNTCVIARGNWRVESLAASGVINRIRSTVRSFSKKGSVSWDLTQILELDYIGAQLLWDNW 74

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            K   +  L  V++   +LFS +      ++  +KP     +   +              
Sbjct: 75  NKTRPRELL--VTSEQNKLFSRLESAGNLQLPAEKPAHWQLFGRIRKFPQ-------AAA 125

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                   ++G ++ +   F  + +  +G    +   +Y+ G   + +  ++ F+ G V+
Sbjct: 126 EHFSGIVGLVGQLMIDLARFAKAPH--RGPWTEISANIYHAGAQALGITAIVGFLIGVVL 183

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           +   A QL  FG ++F ++L+ +  +RE+G LL A+++AGRSGS++ A++G M++ EE+ 
Sbjct: 184 SYLSAQQLHMFGGDVFLVNLLGMSVIRELGPLLAAILVAGRSGSSMTAQLGVMRVTEELS 243

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++ MG+     LI P++ AL I +PLL I  +  A++G  +       +    F S   
Sbjct: 244 AMQVMGMSHGFRLIMPKVIALSIVMPLLIIWTDIVALLGGMLAASFEIGLSIPYFLSALP 303

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           +   +AN + G+ K       I ++A   G  +  ++ SLG+  T  VV SI+IVI+ D+
Sbjct: 304 NAVPMANFWIGIGKGIVFGILIALIACYYGMKIKPNTESLGQGTTNSVVTSITIVILADA 363

Query: 363 LFAIFYFAIG 372
           +FA+    +G
Sbjct: 364 IFAVVLQGVG 373


>gi|107023833|ref|YP_622160.1| hypothetical protein Bcen_2286 [Burkholderia cenocepacia AU 1054]
 gi|105894022|gb|ABF77187.1| protein of unknown function DUF140 [Burkholderia cenocepacia AU
           1054]
          Length = 425

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 100/366 (27%), Positives = 169/366 (46%), Gaps = 33/366 (9%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             R  G W +  ++     V   I        +  DLS I  +D +G + +     +  G
Sbjct: 92  TVRLTGQWTALSLARNRGAVARRIASIAAGRVSEWDLSGIERLDHVGGQALW----RVWG 147

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
           +    GV+    Q  ++     R   + + P+R   ++    L    G  I  F      
Sbjct: 148 RKLPAGVALSATQ-RTIFERIERLDSEREAPERIVRFDPVTRL----GLAIFAFGEHLQG 202

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              + G VI +                     +Y  G   +P+  L++F+ G V++   A
Sbjct: 203 GITMFGRVILDALSVLRRPKTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 260

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M
Sbjct: 261 QQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 320

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     LI PR+ AL +++PLL +  N  A+ G                         +
Sbjct: 321 GIPHGLRLILPRVLALGVAMPLLVMWTNIIALPG----------------------VVPI 358

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN++ G+ K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI 
Sbjct: 359 ANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIL 418

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 419 FQNVGL 424


>gi|15598407|ref|NP_251901.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|9949331|gb|AAG06599.1|AE004744_14 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
          Length = 381

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 112/364 (30%), Positives = 184/364 (50%), Gaps = 4/364 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R  G+W     + +  +V     +S  + +   DLS +  +DT GA L+   +      
Sbjct: 21  VRAIGDWTLAHYTALEREVTRL--RSEVAANVSFDLSQLGALDTAGAALLAELLGAERLA 78

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
              +       +  +L+           +P++     +   L   IG  +  F     + 
Sbjct: 79  DLAELEPGLPRERQALLKTVGHALHDFCEPEKPKPPTTAIELLARIGCAMETFWLHLKAL 138

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +GL +            ++  +  L+  +   G+  VP++ L++F+ GAVIA  GA 
Sbjct: 139 LGFIGLTLETLFRSLVRPASWR--VTPLVANIEKSGLDAVPIIALLTFLVGAVIAFLGAT 196

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L+ FGA I++++L+    LRE  VLLTA+++AGR+ SA  A+IGSMK NEEIDAIR +G
Sbjct: 197 VLANFGATIYTVNLVVFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRALG 256

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           L+ + +L+ PR+ AL++SLP+LT +     I+G   V     DIP A+F S       + 
Sbjct: 257 LNPIELLVLPRVLALLVSLPMLTFVGMLCGIVGGMTVCAWTLDIPPAMFLSIMEDGIGVQ 316

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   G+ KAP  A  I ++   EGF V   + S+G+  TT VV SI +VI++D+L A+ +
Sbjct: 317 HFLVGISKAPLFAFLIAVIGCLEGFKVSGSAQSVGEHTTTSVVHSIFVVILLDALAALLF 376

Query: 369 FAIG 372
             +G
Sbjct: 377 MEMG 380


>gi|160872209|ref|ZP_02062341.1| ABC transporter, permease [Rickettsiella grylli]
 gi|159121008|gb|EDP46346.1| ABC transporter, permease [Rickettsiella grylli]
          Length = 375

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 112/376 (29%), Positives = 195/376 (51%), Gaps = 13/376 (3%)

Query: 1   MSENGITVFRFAGNWKSPEISE-IADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
           +S+ G       G W    I +   D     +N+ I+S   I++ + IT++D+ GA  + 
Sbjct: 10  LSKQGNHQIDCQGAWTLSGIRKKNLDQSFQKLNRHIES-PLILNAAFITQMDSSGAWQLY 68

Query: 60  YFMEKYH--GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
            + ++     K+ L G+++  + LF +I     +     + +              +GKK
Sbjct: 69  QWKKQLAKKRKVHLIGLNSKHQALFGMIETAAEQIKPLPREK-------TFRGLGLLGKK 121

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
            ++  N+  S    +G    +         + +  + +++  +   G+  + ++ L+SF+
Sbjct: 122 SIEQWNELKSYLAFIGKNFISACHAFLHPRQLR--VRAILGIIENTGLDALGIIALLSFM 179

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  Q  FQL  FGA  F IDL+ +  LRE   LLTA+M+AGRSGSA  A++G MKI
Sbjct: 180 IGIVLTYQMGFQLKNFGATRFIIDLLGLAILREFSPLLTAIMVAGRSGSAFTAQLGMMKI 239

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EEIDA+ TMG+   ++LI PR+W L+++LPLLT+ A+   ++G   +     +I +  F
Sbjct: 240 KEEIDALNTMGVLPRQLLILPRLWGLLLALPLLTVWADIFGLLGGMAMTHNMMNISYLDF 299

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
             RF    +L+++  G+ KAP  A  I   A  +G  V   ++S+G++ T  VVQ I  +
Sbjct: 300 LHRFPKVVSLSSLIIGVGKAPVFALIIASTACFQGLRVSGSADSVGRQTTRSVVQGIFFI 359

Query: 358 IIIDSLFAIFYFAIGI 373
           I+ D+LF+I +  + I
Sbjct: 360 IVADALFSILFSTLNI 375


>gi|82702739|ref|YP_412305.1| hypothetical protein Nmul_A1612 [Nitrosospira multiformis ATCC
           25196]
 gi|82410804|gb|ABB74913.1| Protein of unknown function DUF140 [Nitrosospira multiformis ATCC
           25196]
          Length = 384

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 111/366 (30%), Positives = 191/366 (52%), Gaps = 5/366 (1%)

Query: 9   FRFAGNWKSPEISEIADD--VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
               GNW     + + +   ++   ++ + +    VDL  +  +DT GA  +   +    
Sbjct: 21  LNVRGNWTLENYAALGEQIALLRHRSRGLAAAGRNVDLGGLAALDTAGAARLYELLG-AE 79

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
              +L        +  +L+    +      K  +     +F  +  H G  +  F     
Sbjct: 80  LAGELAASDALSRERSALLLMVAKAMEAAGKVSQRRQRGAFIEIFGHAGVALEIFRQQIL 139

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +    +G  +           +++  L S++ Q++  G++ VP++ L++F+ GAVIA  G
Sbjct: 140 ALLGFMGFTLDALARGLLHPKRWR--LTSIVAQIHETGLNAVPIIALLNFMVGAVIAFLG 197

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A  L+ FGA I++++L++   LRE+GVLLTA+++AGR+ S   A++GSMKINEEIDA R 
Sbjct: 198 ATVLANFGASIYTVNLVTFAFLRELGVLLTAILMAGRTASTFTAQLGSMKINEEIDATRV 257

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +GL+ V +L+ PR+ AL +SLP+LT +   S I+G ++V     DI  A+F + F     
Sbjct: 258 LGLNPVNLLVLPRVLALFVSLPILTFVGMISGILGGALVCALQLDISLAMFLTIFQDQIE 317

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L +   G+ KAP  A  IG++   EG  V   + S+G+  T  VV SI +VI +D++ A+
Sbjct: 318 LRHFLVGMSKAPVFAFVIGVIGCLEGLKVSGSALSVGQHTTASVVHSIFVVIFLDAMAAL 377

Query: 367 FYFAIG 372
           F+  +G
Sbjct: 378 FFMEMG 383


>gi|83720699|ref|YP_440931.1| ABC transporter permease [Burkholderia thailandensis E264]
 gi|83654524|gb|ABC38587.1| ABC transporter, permease protein [Burkholderia thailandensis E264]
          Length = 404

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 175/366 (47%), Gaps = 11/366 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             R +G W +  ++    +V   I +  +      DLS +  +D +G + +     +  G
Sbjct: 49  TVRLSGQWTALALARDRGNVARRIARLAKEPVGEWDLSGVDRLDHVGGQALW----RVWG 104

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
           +    G++    Q  ++     R     + P+     +         G+ +  F      
Sbjct: 105 RRLPAGIALTDNQ-RTVFERIERLDAGREAPEPVVRIDPVTRF----GQGLFTFGEHLYG 159

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              +LG +I +                 +   +Y  G   +P+  L++F+ G V++   A
Sbjct: 160 GIALLGGLIVDLLSVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIVLSYLSA 217

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M
Sbjct: 218 QQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 277

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     +  PR+ AL +++PLL +  N  A+ G ++       I    F     S   +
Sbjct: 278 GIPHGLRITLPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDLNFFVRSLPSVVPI 337

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN+F GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI 
Sbjct: 338 ANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAIL 397

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 398 FQNVGL 403


>gi|315453380|ref|YP_004073650.1| ABC transport system permease protein (pseudogene) [Helicobacter
           felis ATCC 49179]
 gi|315132432|emb|CBY83060.1| putative ABC transport system permease protein (pseudogene)
           [Helicobacter felis ATCC 49179]
          Length = 369

 Score =  275 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 172/366 (46%), Gaps = 8/366 (2%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
                GNW     ++    +   +  +       VD   +  +D +   L+   + +   
Sbjct: 12  TLFLRGNWDFKTPAQTLLRLEKLLKNA--PPIRAVDFREVERLDFVFLMLLYDLLGRK-- 67

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
           K  +   + +   +  ++    ++        R        N    +G+ IV F N   +
Sbjct: 68  KPAILNANAYNAHVLEVVQHWVKEDPSIL--SREHSKPPKINPLNKLGQSIVDFFNTMLN 125

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
             +  G+V+   G            L  LI  ++  G   +PV IL  FV G  IA QGA
Sbjct: 126 TFNFCGMVLYFLGRAIIKPKTL--CLTPLIHHIHESGFKVLPVSILTVFVVGFAIALQGA 183

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL Q G  + SI++ + L LRE+G  +  +++AGRS S+  A+IG MKI EE+DA+ TM
Sbjct: 184 IQLQQLGFPLMSIEMTAKLALREMGPFILTLVVAGRSASSFTAQIGVMKITEELDAMHTM 243

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GL     L+ PR+ AL+I +PL+  +A+  A++G  + I     + F  + +R H    L
Sbjct: 244 GLSPFAWLVLPRVLALVIVMPLMVFIADAFALLGTMVAIKYQLGVTFNHYIARLHENVGL 303

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           ++ F GLIKAPF   AI IV    GF V   + S+G   T  VV ++  +I +++LF++ 
Sbjct: 304 SHFFVGLIKAPFWGFAIAIVGCMRGFEVKGDTESIGTLTTISVVNALFWIIFLNALFSVI 363

Query: 368 YFAIGI 373
           +  + I
Sbjct: 364 FSKLNI 369


>gi|328954405|ref|YP_004371739.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM
           11109]
 gi|328454729|gb|AEB10558.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM
           11109]
          Length = 418

 Score =  275 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 103/368 (27%), Positives = 181/368 (49%), Gaps = 12/368 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G      +G  +  +++ I    +  + +  Q  S  +DL  +  +D+ GA  ++   E
Sbjct: 57  DGGQKLLISGRLELFDLA-IFSREIQPLLQQPQLSSVGLDLGGLEYLDSAGALAVLQLAE 115

Query: 64  KYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
           K   +     L  +S  I+++  LI       I+                   +G+  + 
Sbjct: 116 KLKSQGIICTLDNISPKIKKILDLID------IQALTHPPLITVGKRFGWISQVGEASLA 169

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           F  D        G ++ +    C    + +     ++  M   GV G+P+V LI  + G 
Sbjct: 170 FWRDIIEVIAFFGELLLDLASVCLRPRRVR--WEYVMFYMKRAGVDGLPIVSLIGLLLGL 227

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           +IA   + QL QFGA I+   L+ +  +RE+G ++TA+++AGRSGSA  AEIGSMK++EE
Sbjct: 228 IIAFMSSLQLQQFGANIYVASLLGVAMVRELGPIMTAILVAGRSGSAFAAEIGSMKVSEE 287

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +DA+  MG + +R+L +P++ A ++ +PLLTI A+   IIG  IV     D+    +   
Sbjct: 288 VDALTVMGFNPMRMLTTPKVIASLVVVPLLTIYADLLGIIGGLIVGVTMLDLTVYSYIQE 347

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                TL +  +  IK+   A  I  +  + GF V   ++++G   T+ VV +I ++I++
Sbjct: 348 TRRILTLFDFTSSFIKSVVFAFLIAAIGCQRGFQVRGGASAVGSATTSAVVAAIFLIIVV 407

Query: 361 DSLFAIFY 368
           DS+FAI  
Sbjct: 408 DSIFAIVL 415


>gi|33599154|ref|NP_886714.1| putative integral membrane protein [Bordetella bronchiseptica RB50]
 gi|33575200|emb|CAE30663.1| putative integral membrane protein [Bordetella bronchiseptica RB50]
          Length = 378

 Score =  275 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 177/367 (48%), Gaps = 12/367 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-YFMEKYH 66
           V   +G+W    ++   +        +        DL  +  +DTIGA L+   + ++  
Sbjct: 23  VCHVSGDWSMQALAAPGEVERRRAALARVDPDQRWDLRGVERLDTIGAHLLWGAWGQQLP 82

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
            +++    S    ++F  +     + +    P   + +         IG  +     +  
Sbjct: 83  ERVRW---SDGQREVFQTLQRNRGEALPAPAPADRWGW------LRAIGDAVFDAGRNGR 133

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +   + G ++ + G F       +G    +  Q+Y  G   + +  L+ F+ G V++   
Sbjct: 134 ALIIMFGQLVLDLGAFLRRPS--RGPWREISAQVYRTGAQALGITALVGFLIGVVLSYLS 191

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A QL  FGA+ F + L+ +  +RE+G +L A+++AGRSGSAI A+IG M++ +E+DA+  
Sbjct: 192 AQQLQMFGADRFIVRLLGVSIVRELGPVLAAILVAGRSGSAITAQIGVMRVTQELDAMLV 251

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG+   + LI PR+ AL I++PLL +  +  A++G  +       +    F +      +
Sbjct: 252 MGISHGQRLILPRVIALAITMPLLVVWTDAMALLGGMLAAQMQLGVSAQWFLTSLPDAIS 311

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L N + G+ K       I +VA   G  +  ++ SLG+  TT VV SI+ VI++D+L+A+
Sbjct: 312 LTNYWIGMFKGVSFGVLIALVACHFGLCIQPNTESLGRGTTTSVVTSITGVILVDALYAV 371

Query: 367 FYFAIGI 373
            + +IGI
Sbjct: 372 IFSSIGI 378


>gi|329905881|ref|ZP_08274264.1| ABC-type transport system [Oxalobacteraceae bacterium IMCC9480]
 gi|327547452|gb|EGF32273.1| ABC-type transport system [Oxalobacteraceae bacterium IMCC9480]
          Length = 372

 Score =  275 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 95/368 (25%), Positives = 175/368 (47%), Gaps = 15/368 (4%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
           +V   +G W+   +++      +    +  +     DL+ IT ID IGA+    ++    
Sbjct: 17  SVIVASGAWQVHALADAGVIGQLDAALARLTKPTGWDLTQITAIDHIGAQ----WLWNVW 72

Query: 67  GKIKLQGV--STHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
           GK +  G+  S   ++ F  +       +   +  R             +G +       
Sbjct: 73  GKTRPPGLVLSDRQDEFFQRLEQAGPLTLPEVQKPRWKQ-------LIRLGARTQSLTGH 125

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                 +LG ++ +   F  +    +G    +   +Y  G   + +  L+  + G V++ 
Sbjct: 126 LIDVVGLLGQLMFDLRRFALNPR--RGPWKEISSNIYRTGYQALGITALVGMLIGVVLSY 183

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
             A QL  FG +I+ ++++ +  +RE+G LL A+++AGRSGS+I A++G M++NEE+DA+
Sbjct: 184 LSAQQLHSFGGDIYLVNILGMSIIRELGPLLAAILVAGRSGSSITAQLGVMRVNEELDAM 243

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MGL     LI P++ AL I++PLL I  +  A++G  +       +    F  +    
Sbjct: 244 LVMGLPHGFRLIMPKVLALAIAMPLLVIWTDAMALLGGMVAANLELGLSPRYFLHKLPDA 303

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             LAN + G+ K       I +VA   GF +  ++ SLG   T+ VV +I++VI+ D++F
Sbjct: 304 VPLANYWIGIGKGVVFGGLIALVACHFGFRIKANTESLGAGTTSSVVTAITVVILADAVF 363

Query: 365 AIFYFAIG 372
           AI +  +G
Sbjct: 364 AIVFSGVG 371


>gi|307825468|ref|ZP_07655686.1| protein of unknown function DUF140 [Methylobacter tundripaludum
           SV96]
 gi|307733354|gb|EFO04213.1| protein of unknown function DUF140 [Methylobacter tundripaludum
           SV96]
          Length = 379

 Score =  275 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 102/374 (27%), Positives = 183/374 (48%), Gaps = 16/374 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY- 60
             +G +  +  G+W    +   A ++   I+    + +   DLS+I  +D+  + ++   
Sbjct: 19  QSDGQSCVKLTGSWNLRSLVT-ATELNRKISSHAANKNIQWDLSSIEVLDSASSLILWKA 77

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIG-KKIV 119
           + +K    ++L+      ++LF         + + QK        S  +L    G +   
Sbjct: 78  WGKKLPVALQLK---PEHQRLFD--------RWQAQKIPEPEPVGSSSSLIIKYGYQLFA 126

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
            F         +LG +  + G               +   +Y  GV  + +  L+ F+ G
Sbjct: 127 NFWGQLLQLVTLLGQLFLDIGYLLLHPGDIP--WSEISITIYESGVRALGITALVGFLIG 184

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V++   A QL  FGAEI+ ID++ +  +RE+G LL A+++AGRSGSA+ A+IG M++ E
Sbjct: 185 IVLSYLSALQLKIFGAEIYIIDILGLSVIRELGPLLAAILVAGRSGSAMTAQIGIMRVTE 244

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DA+  MG+     L  P++ AL I LPL+ +  +  A+IG  +      DI +  FF 
Sbjct: 245 ELDALSAMGISHSLRLTLPKVMALTIVLPLIGVWTSALALIGGMVSAQNTLDISYQQFFL 304

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           +      L N+F GL K+      I ++A   GF +  ++ SLG + T  VV +I++VI+
Sbjct: 305 KLPDVVPLTNVFIGLGKSAVFGLMIALIACHFGFRIKPNTESLGNETTNSVVAAITVVIM 364

Query: 360 IDSLFAIFYFAIGI 373
           +D++FAI +  +G+
Sbjct: 365 VDAVFAILFMNVGM 378


>gi|33594879|ref|NP_882522.1| putative integral membrane protein [Bordetella parapertussis 12822]
 gi|33564955|emb|CAE39902.1| putative integral membrane protein [Bordetella parapertussis]
          Length = 378

 Score =  275 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 177/367 (48%), Gaps = 12/367 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-YFMEKYH 66
           V   +G+W    ++   +        +        DL  +  +DTIGA L+   + ++  
Sbjct: 23  VCHVSGDWSMQALAAPGEVERRRAALARVDPDQRWDLRGVERLDTIGAHLLWGAWGQQLP 82

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
            +++    S    ++F  +     + +    P   + +         IG  +     +  
Sbjct: 83  ERVRW---SDGQREVFQTLQRNRGEALPAPAPADRWGW------LRAIGDAVFDAGRNGR 133

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +   + G ++ + G F       +G    +  Q+Y  G   + +  L+ F+ G V++   
Sbjct: 134 ALIIMFGQLVLDLGAFLRRPS--RGPWREISAQVYRTGAQALGITALVGFLIGVVLSYLS 191

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A QL  FGA+ F + L+ +  +RE+G +L A+++AGRSGSAI A+IG M++ +E+DA+  
Sbjct: 192 AQQLQMFGADRFIVRLLGVSIVRELGPVLAAILVAGRSGSAITAQIGVMRVTQELDAMLV 251

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG+   + LI PR+ AL I++PLL +  +  A++G  +       +    F +      +
Sbjct: 252 MGISHGQRLILPRVIALAITMPLLVVWTDAMALLGGMLAAQMQLGVSAQWFLTSLPDAIS 311

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L N + G+ K       I +VA   G  +  ++ SLG+  TT VV SI+ VI++D+L+A+
Sbjct: 312 LTNYWIGMFKGVSFGILIALVACHFGLCIQPNTESLGRGTTTSVVTSITGVILVDALYAV 371

Query: 367 FYFAIGI 373
            + +IGI
Sbjct: 372 IFSSIGI 378


>gi|150396764|ref|YP_001327231.1| hypothetical protein Smed_1554 [Sinorhizobium medicae WSM419]
 gi|150028279|gb|ABR60396.1| protein of unknown function DUF140 [Sinorhizobium medicae WSM419]
          Length = 379

 Score =  275 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 150/370 (40%), Positives = 217/370 (58%), Gaps = 10/370 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +      + F+G+W+      ++  +      +     +  D S IT +DT GA +I  F
Sbjct: 18  AAGNGRRYVFSGDWRHETAEAMSAKLKRLGKPA--GGQSEFDFSGITAMDTAGAWIIRRF 75

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
           M     +++  G   + E + +L       + +  +         F+ L   +G+  V  
Sbjct: 76  MNGTADEVRFAGSDRYAELILALPKQLRSPEGETARAP------LFQRLFAPVGELTVSI 129

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             D+ +  +ILG  +   G              +++ Q+  +GV   P++ L+SF+ GA+
Sbjct: 130 WTDTVAAMYILGSAVR--GAQMKLGRHAGVSPAAIVHQIDRMGVMATPIITLMSFLIGAI 187

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IAQQGAFQL  FGAEIF +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EE+
Sbjct: 188 IAQQGAFQLRSFGAEIFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREEV 247

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA++ MGL  + +L+ PR+ AL I LPLLTI+ANF+A+ GA++V W Y  I    F +R 
Sbjct: 248 DALKVMGLSPIGVLVFPRLVALTIVLPLLTIIANFAALAGAAMVAWAYSGITIPTFLARL 307

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                 +++  G+IKAPFMA  IG+VA  EG  VG  + SLG++VT+ VV+SI +VI+ID
Sbjct: 308 QEAVDFSSVAAGMIKAPFMALIIGVVAAVEGLKVGGSAESLGRRVTSSVVKSIFVVILID 367

Query: 362 SLFAIFYFAI 371
            LFAIFY AI
Sbjct: 368 GLFAIFYAAI 377


>gi|241767246|ref|ZP_04764987.1| protein of unknown function DUF140 [Acidovorax delafieldii 2AN]
 gi|241362094|gb|EER58209.1| protein of unknown function DUF140 [Acidovorax delafieldii 2AN]
          Length = 373

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 90/365 (24%), Positives = 180/365 (49%), Gaps = 14/365 (3%)

Query: 11  FAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-YFMEKYHGK 68
             G W + E+ + +    + A  +   + +   DL  +  +D +GA+L+  ++ + + G+
Sbjct: 21  LLGRWGAAELGQRSQWRALSAQLRDNTAPAGGWDLRGLDWLDHVGAQLLWDHWGQAWPGR 80

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
           ++L   +     +   +            P          +   H+G  ++  ++ +   
Sbjct: 81  LEL---TDPQRAMLERVG-------AFTAPPPPAEPWRLADQADHLGVLVLHGLDHARHV 130

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             ++G +  +      + +  +     +   +Y +G + +P+  L+ F+ G V+A   + 
Sbjct: 131 VQLIGQLALDLLRLVRAPH--RAPWRDMSGHVYRMGATALPITALVGFLIGVVLAYLMSL 188

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           QL Q+GAE F ++++ I  +RE+G +L A+++AGRSGS+I A+IG M++ EE+DA+R MG
Sbjct: 189 QLRQYGAESFIVNILGISLIRELGPMLAAILVAGRSGSSITAQIGVMRVTEELDAMRVMG 248

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +     L+ PR  AL +++PL+++    +A+ G  +       I  A F     +   + 
Sbjct: 249 IPHGFRLVMPRTLALALAMPLISVWTTLAALAGGMLAADVSMGISPAYFVEALPAAVKIG 308

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           N+     K+      I ++    G  V  ++ SLG+  T  VV SI++VII+D+LFA+ +
Sbjct: 309 NLGLATAKSVVFGALIALIGCHWGLRVKPNTQSLGEGTTASVVTSITMVIIVDALFAVAF 368

Query: 369 FAIGI 373
             IGI
Sbjct: 369 KNIGI 373


>gi|319788025|ref|YP_004147500.1| hypothetical protein Psesu_2437 [Pseudoxanthomonas suwonensis 11-1]
 gi|317466537|gb|ADV28269.1| protein of unknown function DUF140 [Pseudoxanthomonas suwonensis
           11-1]
          Length = 371

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 122/364 (33%), Positives = 188/364 (51%), Gaps = 13/364 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R  G+W      E+A  +     + I  D A VD S +  ID+ G   +  F  +    
Sbjct: 20  VRLQGDWILDHALEMAARL-----REIPGDVASVDASGVGRIDSAGMMQLARFARRRELA 74

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
                 S     L  LI       + + +P+R   Y  F      +G+       +    
Sbjct: 75  DDALHFSESHLPLVQLIE-----DVPDDRPRRKRDYG-FAAALERLGRATHTVGRNIVEL 128

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
               G  +           +    L + +  M  VG+  +P+V L+S++ GAVIA  G+ 
Sbjct: 129 LGFTGENLVKLLRLLRQPRR--FRLTATVSHMEQVGLDALPLVALLSYLVGAVIAFLGST 186

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L+ FGAEIF ++L+SI  LRE  VLLTA+++AGR+ SA  A+IGSMK  EEIDAIRT+G
Sbjct: 187 ILADFGAEIFVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGSMKAREEIDAIRTLG 246

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD + +L+ PR+ AL++ LPLLT +A  + + G   V     +IP  ++ +R   T  + 
Sbjct: 247 LDPIELLVIPRLVALLVMLPLLTFVAMMAGLAGGVTVGAFDLEIPPQMYLARMEETMQVR 306

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   G+ KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VIIID+L A+++
Sbjct: 307 HFLVGMSKAPVFAMVIGLIGCLEGMRVQGSAQSVGERTTSSVVQTISLVIIIDALAALWF 366

Query: 369 FAIG 372
             +G
Sbjct: 367 MNMG 370


>gi|322378616|ref|ZP_08053052.1| hypothetical protein HSUHS1_0274 [Helicobacter suis HS1]
 gi|322380555|ref|ZP_08054721.1| hypothetical integral membrane protein [Helicobacter suis HS5]
 gi|321147017|gb|EFX41751.1| hypothetical integral membrane protein [Helicobacter suis HS5]
 gi|321148923|gb|EFX43387.1| hypothetical protein HSUHS1_0274 [Helicobacter suis HS1]
          Length = 368

 Score =  275 bits (703), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 108/366 (29%), Positives = 181/366 (49%), Gaps = 8/366 (2%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
                G+W     ++    +   +  +       +D   +  +D +   L+   + +   
Sbjct: 11  TLVLQGSWDFKTSAKALTHLKTILKDA--PPIEAIDFKGVASLDFVFLMLLYDLLGR--R 66

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
           K +    S +  ++  ++    R      K +       F N    +G+ +V F N   +
Sbjct: 67  KPEFLNPSAYNAKVLEVVETWIRANPSILKQEHVSRV--FINPLEKLGRGVVSFYNTLLN 124

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
             +  G++I   G               LI  ++  G   +PV IL  FV G  IA +GA
Sbjct: 125 TFNFCGMIIYYVGLAFIRPKS--VCWTPLIHHIHESGFKVLPVSILTVFVVGFAIALEGA 182

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL + G  + SI++ + L LRE+G  + A+++AGRS S+  A+IG+MKI EE+DA+ TM
Sbjct: 183 VQLQELGFPMMSIEMTAKLALREMGPFILALVVAGRSASSFTAQIGAMKITEELDAMETM 242

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GL+    L+ PR+ AL+I++PLL  LA+  A++GA I I     I FA + +R H    L
Sbjct: 243 GLNPFAFLVLPRVVALVIAMPLLVFLADAFALLGAMIAIKYQLGIGFAHYVARLHENVGL 302

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           ++ F GLIKAPF   AI +V    GF V  ++ S+G+  T  VV S+  +I +D+LF++ 
Sbjct: 303 SHFFIGLIKAPFWGFAIALVGCMRGFEVKGNTESIGQLTTISVVNSLFWIIFLDALFSVI 362

Query: 368 YFAIGI 373
           +  + +
Sbjct: 363 FSRLDV 368


>gi|33591357|ref|NP_879001.1| putative integral membrane protein [Bordetella pertussis Tohama I]
 gi|33570999|emb|CAE40477.1| putative integral membrane protein [Bordetella pertussis Tohama I]
          Length = 376

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 177/367 (48%), Gaps = 12/367 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-YFMEKYH 66
           V   +G+W    ++   +        +        DL  +  +DTIGA L+   + ++  
Sbjct: 21  VCHVSGDWSMQALAAPGEVERRRAALARVDPDQRWDLRGVERLDTIGAHLLWGAWGQQLP 80

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
            +++    S    ++F  +     + +    P   + +         IG  +     +  
Sbjct: 81  ERVRW---SDGQREVFQTLQRNRGEALPAPAPADRWGW------LRAIGDAVFDAGRNGR 131

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +   + G ++ + G F       +G    +  Q+Y  G   + +  L+ F+ G V++   
Sbjct: 132 ALVIMFGQLVLDLGAFLRRPS--RGPWREISAQVYRTGAQALGITALVGFLIGVVLSYLS 189

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A QL  FGA+ F + L+ +  +RE+G +L A+++AGRSGSAI A+IG M++ +E+DA+  
Sbjct: 190 AQQLQMFGADRFIVRLLGVSIVRELGPVLAAILVAGRSGSAITAQIGVMRVTQELDAMLV 249

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG+   + LI PR+ AL I++PLL +  +  A++G  +       +    F +      +
Sbjct: 250 MGISHGQRLILPRVIALAITMPLLVVWTDAMALLGGMLAAQMQLGVSAQWFLTSLPDAIS 309

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L N + G+ K       I +VA   G  +  ++ SLG+  TT VV SI+ VI++D+L+A+
Sbjct: 310 LTNYWIGMFKGVSFGILIALVACHFGLCIQPNTESLGRGTTTSVVTSITGVILVDALYAV 369

Query: 367 FYFAIGI 373
            + +IGI
Sbjct: 370 IFSSIGI 376


>gi|302039183|ref|YP_003799505.1| putative ABC transporter permease [Candidatus Nitrospira defluvii]
 gi|300607247|emb|CBK43580.1| putative ABC-type transport system, permease component [Candidatus
           Nitrospira defluvii]
          Length = 373

 Score =  274 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 113/366 (30%), Positives = 182/366 (49%), Gaps = 15/366 (4%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM--- 62
               R  G W  P+++ +   +      +    + + + S I   DT GA ++   +   
Sbjct: 15  GRTLRCRGAWTMPDVAPVERALRRMTWPA--RSALVFEASGIEAFDTGGAVVLYRALMEA 72

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            +   ++ +QG+     QL SL+S      +    P++        N        I   +
Sbjct: 73  RRQGCEVSIQGLRPDYAQLMSLVSSHWAAMVAEVAPRQ--------NGSERFRASIRNRV 124

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                    LG   +      AS  + +    S +  +   GV  +P+  L++F+ G VI
Sbjct: 125 AQGAGALEFLGESATALVRLVASPRRLR--WRSCLNSLRLDGVHALPITGLLTFLIGVVI 182

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL +FG  IF +DL+ I  LREI  L+ A++IAGRSGSA  A+IG+MK+ EE+D
Sbjct: 183 AYQGAEQLRKFGTNIFIVDLVGISLLREIAPLIAAILIAGRSGSAYAAQIGTMKVTEELD 242

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++T GL  + +L+ PR+ AL+++LPLLT  A+   + G  ++     ++ F  F SRF 
Sbjct: 243 ALQTFGLSPIELLVLPRVLALVVALPLLTAYADVLGVFGGMLIASNQLNVSFTAFLSRFE 302

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L ++  GL KAPF A  I +V   +GF +    + +G+  T  VVQSI +VII D+
Sbjct: 303 EAVALRHMLIGLGKAPFFAVIIALVGCYQGFQIRGGVDDVGRHTTISVVQSIFLVIIFDA 362

Query: 363 LFAIFY 368
           + +I  
Sbjct: 363 ICSILL 368


>gi|124386096|ref|YP_001027344.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10229]
 gi|124294116|gb|ABN03385.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10229]
          Length = 428

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 101/372 (27%), Positives = 176/372 (47%), Gaps = 12/372 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
              G TV R  G W +  ++    +V   I +  +      DLS +  +D +G + +   
Sbjct: 68  GSQGRTV-RLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALW-- 124

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
             +  G+    G++    Q   +     R     + P+     +         G+ +  F
Sbjct: 125 --RVWGRRLPDGIALTDNQRV-VFKRIERLDAGRESPEPVVRIDPVTRF----GQGLFTF 177

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                    +LG +I +                 +   +Y  G   +P+  L++F+ G V
Sbjct: 178 GEHLYGGIALLGGLIVDLLAVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIV 235

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           ++   A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+
Sbjct: 236 LSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEEL 295

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+R MG+     +  PR+ AL +++PLL +  N  A+ G ++       I    F    
Sbjct: 296 DAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSL 355

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            S   +AN+F GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D
Sbjct: 356 PSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILAD 415

Query: 362 SLFAIFYFAIGI 373
           ++FAI +  +G+
Sbjct: 416 AVFAILFQNVGL 427


>gi|119385048|ref|YP_916104.1| hypothetical protein Pden_2317 [Paracoccus denitrificans PD1222]
 gi|119374815|gb|ABL70408.1| protein of unknown function DUF140 [Paracoccus denitrificans
           PD1222]
          Length = 364

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 122/366 (33%), Positives = 196/366 (53%), Gaps = 19/366 (5%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           V R AG +    + ++  +   A         + ++LS +T +DT  A    Y   +   
Sbjct: 18  VLRLAGEFTVWTLGQLPPEAGTA---------SRLELSGLTRLDTAAAW---YLTGRERE 65

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
              L G++    QL   +     +          +       +    G+++V  +     
Sbjct: 66  GASLDGLTGTQAQLLDTVRQALPQPEAESAGPAGWRL-----MLEQTGRRMVAALVFLRE 120

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
            A  LG  ++           F+    SL+      G+  VP+V L+SF+ G V+A QGA
Sbjct: 121 IAEYLGRFLAALARGIRHPGDFR--FTSLVYHCQETGLRAVPIVALMSFLIGIVLAFQGA 178

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL QFGAE+F IDL++I  LRE+G+LLTA+++AGR+ SA+ A IGSMK+NEEIDA+RT+
Sbjct: 179 VQLRQFGAEVFVIDLIAISILRELGILLTAIIVAGRTASALTASIGSMKMNEEIDAMRTL 238

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GLD   +LI PR+ ALII+LP+L ++AN + ++G +++ W    I  ++F  R  +  ++
Sbjct: 239 GLDPDMVLILPRVLALIITLPILGLIANIAGLVGGALMSWIELGISPSMFRYRLLADTSV 298

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            ++  GL KAP  A  IG++    G  VG  + SLG + +  VV +I  VI+ D+LF+IF
Sbjct: 299 DHVIVGLSKAPVFALIIGVIGCHAGMKVGKDAESLGAETSRAVVNAIFAVIVADALFSIF 358

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 359 FSEVGL 364


>gi|82703102|ref|YP_412668.1| hypothetical protein Nmul_A1981 [Nitrosospira multiformis ATCC
           25196]
 gi|82411167|gb|ABB75276.1| Protein of unknown function DUF140 [Nitrosospira multiformis ATCC
           25196]
          Length = 378

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 91/372 (24%), Positives = 172/372 (46%), Gaps = 12/372 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
             +GI      GN     + E    +   +++   +     DL+ I  +D  GA L+   
Sbjct: 18  GADGIPRVIVEGNCTLTALGERIRPIAAELSEYATAPEIRWDLTQIARMDDAGAVLLWRG 77

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
                 +  L  V    E+LF  +  T     +    +              +GK +   
Sbjct: 78  WGNQRPRYLL--VRPEHERLFDRLEETWTPPSEAAPDRLWPIMV--------LGKAVFLL 127

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                    ++G ++           +       +   +Y  G   + +  L+ F+ G V
Sbjct: 128 WEHLVGLVILMGQLVLEIKYLAGRPSRIP--WREISANLYRTGAQALGITALVGFLIGVV 185

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           ++   + QL  FGA +F ++++ I  +RE+G +L A+++AGRSGS++ A++G M++ EE+
Sbjct: 186 LSYLSSRQLQIFGAHVFIVNILGISVIRELGPMLAAILVAGRSGSSMTAQLGVMRVTEEL 245

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  MG+     LI P++ AL +++PL+ +  +  A+IG   V      + +  F SR 
Sbjct: 246 DALTVMGIPHSLRLILPKVIALGLAMPLVVLWTSAVALIGGMTVAELQLGLGYKFFLSRL 305

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                ++N++ GL K      AI +++   G  +  ++ SLG+  T  VV SI++VIIID
Sbjct: 306 PDAVAVSNLWLGLGKGIVCGMAIALISCHFGLRIKSNTESLGEGTTNSVVTSITVVIIID 365

Query: 362 SLFAIFYFAIGI 373
           ++FA+ +  +G+
Sbjct: 366 AIFAVIFSDVGL 377


>gi|197105491|ref|YP_002130868.1| ABC transporter, permease protein [Phenylobacterium zucineum HLK1]
 gi|196478911|gb|ACG78439.1| ABC transporter, permease protein [Phenylobacterium zucineum HLK1]
          Length = 375

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 110/370 (29%), Positives = 190/370 (51%), Gaps = 11/370 (2%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
                  G+W +  +      +  A++      +  +DLS +  +DT GA  ++      
Sbjct: 15  RPTVALTGDWTARALGGAGTALAEALDGLT---NIAIDLSGVRRLDTAGAYAVVRAAGPA 71

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
               K++     + +L  ++    R +   ++  + F      +L   +GK +V F +D 
Sbjct: 72  FDASKVE-ARPEVRRLLEVVDEAARIQPAVRQEPKGFH-----DLTIRVGKGVVGFGHDF 125

Query: 126 CSQAHILGLVISNTGEFCASSY--KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                 LG ++          +    K    +L+  M   G+  +PVV + +F  GAV+A
Sbjct: 126 IDTMGFLGHLLVVLARSLVLLFVNPRKIRWPALVSIMERAGLDAIPVVAVATFFIGAVVA 185

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
             GA  L QFGAE+F+++L+ I  +RE  +++TAV++AGRS S+  AEIGSMK+++EIDA
Sbjct: 186 FIGADMLQQFGAEVFAVELIGISMMREFNIVITAVLLAGRSASSFAAEIGSMKMSQEIDA 245

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           ++ MG+D    L+ PR  AL+I++PLLT +A  + ++G  +V W    +  A F  R   
Sbjct: 246 MKVMGIDPFEALVFPRFAALLITIPLLTFVATLAGLLGGIVVTWSVLGLGPAFFLQRIVD 305

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              + + +  L KAP MA  I  +  ++G   G    SLG++VT  VV +I  +I+ID++
Sbjct: 306 NVGVDHFWIALSKAPVMAGVIAGIGCRQGLETGGDVESLGRRVTAAVVHAIFAIIVIDAI 365

Query: 364 FAIFYFAIGI 373
           FA+ Y  +G+
Sbjct: 366 FAMIYMELGL 375


>gi|220934666|ref|YP_002513565.1| protein of unknown function DUF140 [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995976|gb|ACL72578.1| protein of unknown function DUF140 [Thioalkalivibrio sp. HL-EbGR7]
          Length = 375

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 100/368 (27%), Positives = 179/368 (48%), Gaps = 8/368 (2%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
             V R AG      +S +  + +  + K        VD S +   D  G  L++  + + 
Sbjct: 16  GVVLRLAGRLDVHTVSTVWGEALAGL-KVRSGRPVRVDTSGVDYCDGAGVALVVDLLRQP 74

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
                  G+    E++  ++     +    +             L  H+   +       
Sbjct: 75  RDPGAEVGLGETPEEVRRMLVPFDVRDFSGEAVPPQRGPG----LKQHLANGMHDLGRYL 130

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
             Q   +G   +          + +      +      G + +P+V+LI+F+ G ++A Q
Sbjct: 131 YLQVAFVGEATAAMFHAARHPRQVR--WRDALNLAQEAGANALPIVMLIAFLMGVILAFQ 188

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            A  + QFGAEIF  +L+++  LRE+  L+TA+++AGRSG+A  AEIG+MK+NEEI+A+ 
Sbjct: 189 SAVAMRQFGAEIFVANLVALSLLRELAPLMTAILLAGRSGAAFAAEIGTMKVNEEINALT 248

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           TMGLD VR L+  R+ A +  +PLLT++AN   ++G ++V+  + DIPF  +F++  S  
Sbjct: 249 TMGLDPVRFLVVTRVLAAVAVMPLLTLVANLVGLVGGAVVMKGF-DIPFVTYFNQVTSAV 307

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           TL+++  GL KA      +  V    G      + ++G   T  VV +I ++++ D +FA
Sbjct: 308 TLSDLLGGLFKATVFGLLVAGVGCLRGLETRSGAAAVGISTTRAVVSAIILIVVADGVFA 367

Query: 366 IFYFAIGI 373
           + ++ + I
Sbjct: 368 VVFYHLDI 375


>gi|221199880|ref|ZP_03572923.1| putative ABC transporter, permease protein [Burkholderia
           multivorans CGD2M]
 gi|221207452|ref|ZP_03580461.1| putative ABC transporter, permease protein [Burkholderia
           multivorans CGD2]
 gi|221172655|gb|EEE05093.1| putative ABC transporter, permease protein [Burkholderia
           multivorans CGD2]
 gi|221180119|gb|EEE12523.1| putative ABC transporter, permease protein [Burkholderia
           multivorans CGD2M]
          Length = 446

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 101/366 (27%), Positives = 171/366 (46%), Gaps = 11/366 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             R  G W +  ++     VV           +  DLS I  +D +G + +     +  G
Sbjct: 91  TVRLTGQWTALALARNRGAVVRRAESVATGSVSEWDLSGIGRLDHVGGQALW----RVWG 146

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
           +    G++    Q  ++     R   + + P+R         L    G  +  F      
Sbjct: 147 RKLPPGIALTATQ-RTIFERIERLDSQREAPERVVRVGPITRL----GLMLFAFAEHLHG 201

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              + G VI +                     +Y  G   +P+  L++F+ G V++   A
Sbjct: 202 GIAMFGRVILDALSVLRRPQTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 259

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M
Sbjct: 260 QQLQMFGANRYIVNILGLAVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 319

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     LI PR+ AL +++PLL +  N  A+ G ++       I    F         +
Sbjct: 320 GIPHGLRLILPRVLALGVAMPLLVMWTNIVALTGGALAAKMVLGIDVNYFVRSLPGVVPI 379

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN++ GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI 
Sbjct: 380 ANLYIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAIL 439

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 440 FQNVGL 445


>gi|261885878|ref|ZP_06009917.1| MTA/SAH nucleosidase [Campylobacter fetus subsp. venerealis str.
           Azul-94]
          Length = 354

 Score =  272 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 109/336 (32%), Positives = 178/336 (52%), Gaps = 13/336 (3%)

Query: 29  MAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFT 88
            ++ +        +DL  +  ID   A        K++   KL   +   +++F+L+S  
Sbjct: 26  KSLKELRSLKVDTLDLKNLIRIDYSAATFF----AKHYNCPKLINSNDKFDKIFALVSDK 81

Query: 89  HRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYK 148
           +   ++  K ++S       NL   IGK I+   N+  S    LG  + N  +   + + 
Sbjct: 82  YILNLQIIKFKKS-------NLIEQIGKNIINLKNELVSFCIFLGEFLFNLTKSLLNPFT 134

Query: 149 FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL 208
            +     L    Y  G+S V +V L SF+ G V+A QGA  L  FGA I+ +D+M I+ L
Sbjct: 135 VR--FKELSNHFYSAGISAVFIVCLTSFLIGIVLAYQGATMLENFGASIYVVDIMGIMTL 192

Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268
           RE+G L+ A+++AGRS S+  A+IG MKI +E++A++TMG +  R ++ PR+ ALI+++P
Sbjct: 193 REVGPLIAAIVVAGRSASSYTAQIGVMKITDELEAMKTMGFEPFRFIVMPRVLALILAMP 252

Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328
            +  LAN  +I G  +V   Y D+ F+ +  RF S+  L + + GL KAPF    I ++ 
Sbjct: 253 FIVFLANAVSIFGQMMVCNWYLDLSFSDYLERFRSSIALRHFWVGLFKAPFFGAVIALIG 312

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            K GF V    NS+G+  T  VV  I  +  +D++F
Sbjct: 313 CKRGFEVSGSINSVGELTTRSVVHEIFWISALDAIF 348


>gi|114764121|ref|ZP_01443360.1| ABC transporter, inner membrane subunit [Pelagibaca bermudensis
           HTCC2601]
 gi|114543479|gb|EAU46494.1| ABC transporter, inner membrane subunit [Roseovarius sp. HTCC2601]
          Length = 377

 Score =  272 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 124/375 (33%), Positives = 196/375 (52%), Gaps = 14/375 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
                 V   +G      +S +               S +VDL+ +  IDT GA L++  
Sbjct: 14  ETGAEAVLSLSGALSIRTVSVL----RQRFAALGFDRSLVVDLAGVERIDTAGAWLLVDL 69

Query: 62  ---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
               +   G   L+ VS     L   +     ++       R       + L   IG+ +
Sbjct: 70  EARAQAAGGSFGLRNVSDTTALLLDNVRQARPEREDRPAAAR-----GIQALLEQIGRAV 124

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           V  +         LGL ++  G       +F+  L +L+     VG+  VP+V L+SF+ 
Sbjct: 125 VGGLRYFADLTGFLGLFLARLGRVLRHPSQFR--LTALVAHCEDVGLRAVPIVALMSFLI 182

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G V+A QG+ QL QFGAE+F +DL++I  LRE+G+LLTA+++AGR+ SA  A IGSMK+ 
Sbjct: 183 GVVLAFQGSEQLRQFGAEVFVVDLIAISVLRELGILLTAIIVAGRTASAFTAAIGSMKMR 242

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+RT+GLD   +L  PRI AL++ LP+L ++A+F  + G +++ W    I  ++F 
Sbjct: 243 EEIDAMRTLGLDPGVMLFVPRILALLLMLPILGLIADFMGLFGGALMAWLELGISPSMFV 302

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +R      + ++  GL+KAP  A  IG+V    G  V  ++ SLG+  +  VV +I  VI
Sbjct: 303 TRLIEGTGVGHLLVGLVKAPAFALIIGVVGCHAGMQVKGNAESLGRMTSGAVVAAIFAVI 362

Query: 359 IIDSLFAIFYFAIGI 373
           + D+LF++F+  +GI
Sbjct: 363 LADALFSVFFAKVGI 377


>gi|91776717|ref|YP_546473.1| hypothetical protein Mfla_2365 [Methylobacillus flagellatus KT]
 gi|91710704|gb|ABE50632.1| protein of unknown function DUF140 [Methylobacillus flagellatus KT]
          Length = 373

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 97/373 (26%), Positives = 175/373 (46%), Gaps = 11/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY- 60
              G       G W    +     ++  A+      + A  DL+ + ++DT GA ++   
Sbjct: 11  DTQGGKRIVLNGQWSLRALDNDFAELRRALKPYFSDEKAQWDLTQVEQLDTAGAAVLWNG 70

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
           +  K  G++ L   +     LF  ++      +  + P+  +       L    GK  + 
Sbjct: 71  WQGKMEGRVTL---TDEQVALFDTLASIETTTVAEKPPRFDWL-----KLVAGFGKLTIF 122

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
             +       ++GL++   G        F          +Y  GV+ +PV  L+ F+ G 
Sbjct: 123 ISSHVVDFVKLIGLLVLELGYLLRRPQDFP--WREFSANIYKSGVTALPVTALLGFMIGI 180

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
            ++   A QL  FGA+IF ++++ +  +RE+G +L AV++AGRSGS++ A+IG M++ EE
Sbjct: 181 AMSYLMATQLRTFGADIFIVNILGLAVIRELGPILMAVLVAGRSGSSMAAQIGVMRVTEE 240

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+ TMG+  +  ++ P++  L +  P L I  +  A++G ++       + F  FF  
Sbjct: 241 IDALATMGISRILRVVLPKVLGLTVIAPFLVIWTSCWALLGGALSANIELGLGFRFFFDY 300

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             +     NI  GLIK       + ++A   G  +  ++ SL +  T+ VV +I+ VI+I
Sbjct: 301 LAAVVQPVNITLGLIKGVMFGFIVAVMACHFGLRIKPNTESLSRSTTSSVVTAITCVILI 360

Query: 361 DSLFAIFYFAIGI 373
           D+ FAI    IG+
Sbjct: 361 DAAFAIITSGIGV 373


>gi|57505618|ref|ZP_00371545.1| conserved hypothetical integral membrane protein [Campylobacter
           upsaliensis RM3195]
 gi|57016165|gb|EAL52952.1| conserved hypothetical integral membrane protein [Campylobacter
           upsaliensis RM3195]
          Length = 377

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 101/337 (29%), Positives = 165/337 (48%), Gaps = 10/337 (2%)

Query: 40  AIVDLSAITEIDTIGAELIMYF---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96
            I+D   +  ID  G    +     ++K     +   +S   + LF L    +++ +K  
Sbjct: 48  CILDFHHLEFIDMAGVRFFLALEYELQKRGITSQRVHLSEKFDALFELCEKNYQRILKEP 107

Query: 97  KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156
           K            L  ++G   +  +         +G   +   +       F+   ++ 
Sbjct: 108 KKHFD-----TAELFVNLGVLSLNLLGILKQFICFVGEFFTAFFQCFKKPKTFR--FVAF 160

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +  +    +  +P+VIL + + G V+A Q AFQL+QFGA IF +DL+ I   RE+  L+ 
Sbjct: 161 LYHIENSALKALPIVILTALLVGVVLAYQTAFQLAQFGANIFIVDLVGISATRELAPLIA 220

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++IAGRS S+  A+IG MKI +EI A+ TMG      +I PR+ AL++++PL+  +++F
Sbjct: 221 AIVIAGRSASSYTAQIGVMKITDEIAAMNTMGFSTFHFIIIPRVVALVVAMPLIVAVSDF 280

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            +I G  +V     DI F  F  RF     L ++  GLIKAP     IG++A   G  V 
Sbjct: 281 VSIFGGMMVAHLNLDINFIEFLRRFKEAVDLKHVIIGLIKAPIFGFLIGLIACFRGLEVK 340

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
             + S+G   T  VV +I  VI  D+LF++    +GI
Sbjct: 341 HTTQSIGIYTTKSVVNAIFWVIAFDALFSVILTQMGI 377


>gi|221211088|ref|ZP_03584067.1| putative ABC transporter, permease protein [Burkholderia
           multivorans CGD1]
 gi|221168449|gb|EEE00917.1| putative ABC transporter, permease protein [Burkholderia
           multivorans CGD1]
          Length = 446

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 101/366 (27%), Positives = 171/366 (46%), Gaps = 11/366 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             R  G W +  ++     VV           +  DLS I  +D +G + +     +  G
Sbjct: 91  TVRLTGQWTALALARNRGAVVRRAESVATGSVSEWDLSGIGRLDHVGGQALW----RVWG 146

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
           +    G++    Q  ++     R   + + P+R         L    G  +  F      
Sbjct: 147 RKLPPGIALTATQ-RTIFERIERLDSQREAPERIVRVGPVTRL----GLMLFAFAEHLHG 201

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              + G VI +                     +Y  G   +P+  L++F+ G V++   A
Sbjct: 202 GIAMFGRVILDALSVLRRPQTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 259

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M
Sbjct: 260 QQLQMFGANRYIVNILGLAVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 319

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     LI PR+ AL +++PLL +  N  A+ G ++       I    F         +
Sbjct: 320 GIPHGLRLILPRVLALGVAMPLLVMWTNIVALTGGALAAKMVLGIDVNYFVRSLPGVVPI 379

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN++ GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI 
Sbjct: 380 ANLYIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAIL 439

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 440 FQNVGL 445


>gi|332162490|ref|YP_004299067.1| ABC transporter, membrane permease [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325666720|gb|ADZ43364.1| ABC transporter, membrane permease [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 354

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 114/340 (33%), Positives = 181/340 (53%), Gaps = 2/340 (0%)

Query: 33  KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKK 92
           ++ Q  S + DL+ +  +DT GA L+   +         +      E+  +L+    R  
Sbjct: 16  RASQPQSVVFDLTQLGALDTAGATLLALLLGDERINHLRELAPKLPEERRTLLETVSRVL 75

Query: 93  IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGF 152
                       + +     + G+ +     D  S    +GL +           +++  
Sbjct: 76  PDLASESSEKPPSFWLEFLANTGRSVDNLWQDIKSLLGFVGLTLEALFSTIFRPSRWR-- 133

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           + SLI  +  +G++ VP+++L++F+ GAVIA  GA  L+ FGA IF++DL+    LRE  
Sbjct: 134 MTSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTTFGAGIFTVDLVVFSFLREFA 193

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
           VLLTA+++AGR+ SA  AEIG MK NEEIDAI+T+GL+ V +L+ PR+ AL+ISLP+LT 
Sbjct: 194 VLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPVELLVLPRVLALLISLPMLTF 253

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           +     I G  +V     DI   +F S   ++  L +   G+ KAP  A  I I+   EG
Sbjct: 254 IGMICGIFGGMVVCALALDISPTMFLSIMQNSNGLQHFLVGISKAPIFAFLIAIIGCLEG 313

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           F V   + S+G   TT VV SI +VI++D++ A+F+  +G
Sbjct: 314 FKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEMG 353


>gi|302382565|ref|YP_003818388.1| hypothetical protein Bresu_1453 [Brevundimonas subvibrioides ATCC
           15264]
 gi|302193193|gb|ADL00765.1| protein of unknown function DUF140 [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 372

 Score =  270 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 108/373 (28%), Positives = 187/373 (50%), Gaps = 12/373 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +  G +V R  G+W +  +   A  +   ++         VDLS +   DT GA  ++  
Sbjct: 11  ATGGGSVLRLTGDWTTMSLGRTAARLSDGLSGRT---IQSVDLSGLGRFDTAGALALVQA 67

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
                 K   Q       +++ ++    RK +   +        S   +   +G  +   
Sbjct: 68  SGLTLPKDAWQ-SRPEAGRIYDMVETLERKSMPAPR-----RQASLTRIFARMGHGVHDA 121

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             +       LG +++ TG         +    + + Q    G+  +P++ + +F  GAV
Sbjct: 122 AAEFLLSMAFLGRLMAATGNAVRHPGAIR--WPAWVSQAERSGLDAMPIIAVTNFFIGAV 179

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IA  GA  L+QFGA +F++DL+ +  LRE+ VL+TA+++AGRS S+  AE+GSM++N+E+
Sbjct: 180 IAFLGADLLTQFGAGVFAVDLIGVSILRELAVLITAILLAGRSASSFAAEVGSMRMNQEV 239

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA++ MG+D  + L+ PR+ A+++ +PLLT +   + + G  IV W    +  A F  R 
Sbjct: 240 DAMQVMGVDPFQALVIPRLAAMLVMVPLLTFVGMIAGLFGGLIVTWSQLALGPAFFLQRM 299

Query: 302 HSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             T     ++  GL KAP  A  I  +  ++G AV     SLG++VT  VVQ+I  +I +
Sbjct: 300 VDTPDMFTHMLVGLSKAPVFAIVIAAIGCRQGLAVSGDVESLGRRVTAAVVQAIFAIIFL 359

Query: 361 DSLFAIFYFAIGI 373
           D++FA+ Y  + I
Sbjct: 360 DAVFALIYLELDI 372


>gi|318606570|emb|CBY28068.1| ABC-type transport system involved in resistance to organic
           solvents, permease component USSDB6A [Yersinia
           enterocolitica subsp. palearctica Y11]
          Length = 354

 Score =  270 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 114/340 (33%), Positives = 181/340 (53%), Gaps = 2/340 (0%)

Query: 33  KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKK 92
           ++ Q  S + DL+ +  +DT GA L+   +         +      E+  +L+    R  
Sbjct: 16  RASQPQSVVFDLTQLGALDTAGATLLALLLGDERINHLRELAPKLPEERRTLLETVSRVL 75

Query: 93  IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGF 152
                       + +     + G+ +     D  S    +GL +           +++  
Sbjct: 76  PDLASESSEKPPSFWLEFLANTGRSVDNLWQDIKSLLGFVGLTLEVLFSTIFRPSRWR-- 133

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           + SLI  +  +G++ VP+++L++F+ GAVIA  GA  L+ FGA IF++DL+    LRE  
Sbjct: 134 MTSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTTFGAGIFTVDLVVFSFLREFA 193

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
           VLLTA+++AGR+ SA  AEIG MK NEEIDAI+T+GL+ V +L+ PR+ AL+ISLP+LT 
Sbjct: 194 VLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPVELLVLPRVLALLISLPMLTF 253

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           +     I G  +V     DI   +F S   ++  L +   G+ KAP  A  I I+   EG
Sbjct: 254 IGMICGIFGGMVVCALALDISPTMFLSIMQNSNGLQHFLVGISKAPIFAFLIAIIGCLEG 313

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           F V   + S+G   TT VV SI +VI++D++ A+F+  +G
Sbjct: 314 FKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEMG 353


>gi|255019625|ref|ZP_05291705.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Acidithiobacillus caldus
           ATCC 51756]
 gi|254970928|gb|EET28410.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Acidithiobacillus caldus
           ATCC 51756]
          Length = 380

 Score =  270 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 102/365 (27%), Positives = 171/365 (46%), Gaps = 13/365 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
               G W    ++   D V   + ++ +      DL AI  +D++GA +I          
Sbjct: 26  LTLRGRWTLRRLTGAMDRVREQLAQAGRGRP--WDLRAIERLDSVGALVIWRAWG----- 78

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
               GV     +L +      R+  + Q P               +G  I+  + D    
Sbjct: 79  ----GVLPADARLSAEQEAVFRRFAQMQTPTAPRRPWGLWARLDALGAHILGVLVDLWGL 134

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             +LG +++           F      +   +   G   +P++ LI F+ G VI+ Q A 
Sbjct: 135 FLLLGALLTELWRALRHPRHFP--WREISATVVRTGPDSLPILSLIGFLIGIVISFQSAP 192

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L+ +GA I+ I +  +  LRE G L+TAV++AGR+GSA  A+IG+M++ EE+DA+RT G
Sbjct: 193 TLASYGANIYIISIAGLSILREFGPLITAVILAGRTGSAFTAQIGAMRVTEELDALRTFG 252

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +  V+ LI P++ AL I+LPLL +  +  AI+GA IV      I  + F           
Sbjct: 253 ISPVQRLILPKVIALAITLPLLVVWTDAVAILGAIIVAKLDLGISASFFLREMPIMVPDF 312

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           N + G+ K       I  V+   G  V  +++SL ++ T  VV ++++VI+ID++ A+ +
Sbjct: 313 NFWLGIGKGILFGILIAWVSGYHGLKVQPNTDSLSRETTDSVVLTLTLVIVIDAVLAMVF 372

Query: 369 FAIGI 373
              GI
Sbjct: 373 ANTGI 377


>gi|254458263|ref|ZP_05071689.1| stas domain protein [Campylobacterales bacterium GD 1]
 gi|207085099|gb|EDZ62385.1| stas domain protein [Campylobacterales bacterium GD 1]
          Length = 357

 Score =  270 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 102/364 (28%), Positives = 179/364 (49%), Gaps = 8/364 (2%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           +F+G +    ++   + +       ++      DL  +   DT  +  I   + K   K 
Sbjct: 2   KFSGEFTLYTVTSYQNKIDEIDFSQVR--KVDFDLEDVVYFDTAASIFINSLIHKLTQKN 59

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
               + T  + +   +       +K++K  ++    +  N    IG+    + +   +  
Sbjct: 60  ITSNIITTNKDILDTLELV----LKSKKTSQAIPEETRPNFLNIIGENTYLYYSGFVAFM 115

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
             +G + +       +    +     +  ++    +  + ++ L SF+ G V+A Q A+Q
Sbjct: 116 AFIGQLFATKINTLKTIKNIR--FKEIAFEINESAIKALGIISLTSFLIGLVVAYQSAYQ 173

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L  +GA IF +D++ I  LRE+  L+TA++IAGRSGSA  A+IG+MKI EE+DA+RTMG 
Sbjct: 174 LKIYGANIFIVDMLGISMLRELAPLMTAIVIAGRSGSAFTAQIGAMKITEELDAMRTMGF 233

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
           D    L+ PRI AL+I++P+L  +A+  ++ G  +V     DI   +F  RF+      +
Sbjct: 234 DPYIFLVLPRIIALMIAMPILIFVADIMSVFGGLLVAVIDLDISPQLFIDRFNDVVAAKH 293

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
            F G+ K PF A  I  + +  G  V   + S+G   T  VV+SI  VII D++F+I + 
Sbjct: 294 FFIGIGKGPFFAFIIASIGVYRGLEVKDDTQSIGFNTTKSVVESIFAVIICDAIFSILFT 353

Query: 370 AIGI 373
            +GI
Sbjct: 354 NLGI 357


>gi|170743041|ref|YP_001771696.1| hypothetical protein M446_4933 [Methylobacterium sp. 4-46]
 gi|168197315|gb|ACA19262.1| protein of unknown function DUF140 [Methylobacterium sp. 4-46]
          Length = 394

 Score =  270 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 125/367 (34%), Positives = 200/367 (54%), Gaps = 10/367 (2%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEKYH 66
           R  G+W + +   +                  VDLS +  +DT+GA ++      +E   
Sbjct: 35  RLTGSWTADQAPAVEAAAAAIAAPGEPGPRVQVDLSGLVRLDTLGAFVLERTRSEIEAAG 94

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
             +   G       L   +++                     +    +G  + +   +  
Sbjct: 95  RAVDYAGARPEHRILLREVAYRRDTPPPP-----RRRRLGLLDGLEALGAGLRRLGAEGL 149

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           S    LG V++      A   +F+    S + QM  +   G P+++LI+F+ G ++ QQG
Sbjct: 150 SWLGFLGEVVAACLRVLARPRRFRA--ASFVNQMEQIAYRGTPIIMLIAFLVGCIVTQQG 207

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
             QL +FGA+ F ++++ IL LRE+GVLLTA+M+AGRSGSA  AEIGSM++ EE+DA+R 
Sbjct: 208 IIQLQRFGAQSFVVNMIGILTLRELGVLLTAIMVAGRSGSAFTAEIGSMRMREEVDALRV 267

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MGLD + ILI PRI AL+++LP+L  LA+ +A++G ++    Y ++ F  F +R  +  +
Sbjct: 268 MGLDPIEILIVPRILALMLALPMLGFLADVAALLGGALTSMAYGNLSFDAFLARLQAVIS 327

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           + +   G++KAPFMA  IGI+A  EGF V   + SLG+ VT  VV+SI +VI++D +FAI
Sbjct: 328 VRHGLVGMLKAPFMALIIGIIATSEGFRVEGSAESLGRHVTASVVKSIFMVIVLDGVFAI 387

Query: 367 FYFAIGI 373
           F+ AI +
Sbjct: 388 FFAAIDL 394


>gi|207727753|ref|YP_002256147.1| abc-type transport system involved in resistance to organic
           solvents, permease component protein [Ralstonia
           solanacearum MolK2]
 gi|206590994|emb|CAQ56606.1| abc-type transport system involved in resistance to organic
           solvents, permease component protein [Ralstonia
           solanacearum MolK2]
          Length = 374

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 101/371 (27%), Positives = 182/371 (49%), Gaps = 12/371 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +G +V   +G+W +  ++E A         ++   ++    L+ +  ID  GA+L+    
Sbjct: 15  DGRSVAYLSGDWTTLALAERAGVRSARRQIRAGLDNANAWCLTEVGRIDHFGAQLLW--- 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            +  G    + +    +Q   +I    R      K + +   N    L    G  ++ F 
Sbjct: 72  -RAWGNRWPEHLDARADQ-RRMIDRVARLDPGGWKKRIAPRINPVTVL----GGAMLDFA 125

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                   ++G ++ +   F  + +  +G    +   +Y  G   + +  L+ F+ G V+
Sbjct: 126 GHLRIGVAMVGQLMFDLLRFARAPH--RGPWREISANIYSTGYKALGITALVGFLIGIVL 183

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           +   A QL  FGA IF ++++ +  +RE+G +L A+++AGRSGSAI A+IG M++ EE+D
Sbjct: 184 SYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELD 243

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R MG+     LI P++ AL I++PLL    +  A+ G  +      DI    F +   
Sbjct: 244 AMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITSLP 303

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               +AN++ G+ K       I +VA   G  +  ++ SLG+  TT VV SI++VI+ D+
Sbjct: 304 DAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITVVILADA 363

Query: 363 LFAIFYFAIGI 373
           +FAI +  +GI
Sbjct: 364 VFAILFKDVGI 374


>gi|312115045|ref|YP_004012641.1| hypothetical protein Rvan_2318 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311220174|gb|ADP71542.1| protein of unknown function DUF140 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 385

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 117/371 (31%), Positives = 190/371 (51%), Gaps = 6/371 (1%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            E G      +G+W    + +    V     ++    +  +D+  +  +DT GA  ++  
Sbjct: 20  EERGTRRLIVSGDWTLAALGDAQAAVDD--FEAPHGAAHEIDIGDVRRLDTAGALTLVGL 77

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
            +               E    L           +         +   +           
Sbjct: 78  RDGKAAAKTADFFRARPEHRILLDEIARAAPAAFEP--PPPRAGAAVEILRRFLSAATSI 135

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             D+      LG   +  G       +F+  + +   Q+   G+S VP++ L+SF+ G V
Sbjct: 136 GRDAIRLTMFLGETTAALGRVVVHPGRFR--IKAFTHQLQQTGLSAVPIIALVSFLIGGV 193

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           + QQ AFQL +FGAE  SID++ IL LRE+GV+L AVM+AGRS SA  A+IG+MK+ EEI
Sbjct: 194 VMQQSAFQLQKFGAETMSIDMLGILALRELGVILAAVMVAGRSASAFTAQIGTMKMREEI 253

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+RT+G+D +  L+ PR+ AL+I+LPLL  LA+  A+ G +++   Y  +   ++  R 
Sbjct: 254 DAMRTLGIDPIETLVLPRVLALMIALPLLVFLADMMALAGGAVMAKLYLSLDTDMYLQRL 313

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           +S+    +++ GLIKAPF A  IG+V   EG +    + S+G +VTT VV++I +V+++D
Sbjct: 314 NSSVQAKHLYVGLIKAPFAALVIGLVGCLEGLSAQGSAESVGTQVTTAVVKAIFLVLVLD 373

Query: 362 SLFAIFYFAIG 372
           ++FAIF  A G
Sbjct: 374 AVFAIFLSAAG 384


>gi|297538919|ref|YP_003674688.1| hypothetical protein M301_1733 [Methylotenera sp. 301]
 gi|297258266|gb|ADI30111.1| protein of unknown function DUF140 [Methylotenera sp. 301]
          Length = 378

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 105/375 (28%), Positives = 184/375 (49%), Gaps = 11/375 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAEL---I 58
           S N +     +G W +  +  I + +  AI  +I+  + + D S +  +D  GA +   +
Sbjct: 12  SMNALPNLTLSGAWVASTLHNIVEKI-HAIPTTIE-LNIVADGSGVEALDMSGAWVMQSL 69

Query: 59  MYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
              ++     I L G      +   ++      +  +    ++        L  HIG   
Sbjct: 70  FSLLKAQGNSITLIGFKPEFVERLKVV----TYEFSHHANPQNNIEIKPPTLLEHIGMAT 125

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
            + + ++      +G V S      A   + +     ++  +   G++ VP+V +++F+ 
Sbjct: 126 TEALKEAKDLLSFVGEVSSVFLASFADPQRIR--WRPILFNIREAGLNAVPIVGILAFLL 183

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G V+A Q A QL  +GA IF +DL+ I  LRE   L+ A++IAGRSGSA  A+IG+M + 
Sbjct: 184 GVVVAYQSADQLRHYGANIFVVDLIGISMLREFAPLIAAIIIAGRSGSAYAAQIGTMSVT 243

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+R +G+  + +L+ P++  L ISLPLLT+ A+   I G  +      D+ F  F 
Sbjct: 244 EEIDAMRILGIAPMEMLVLPKLIGLAISLPLLTVWADMLGIFGGMLTASAQLDVSFVDFV 303

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
            R      +     GL KA   A  I ++   +GF     ++++G++ T  VVQSI +VI
Sbjct: 304 GRLVKAVEMTTYTVGLGKAFVFAIIITMIGCFQGFRTKGGADNVGRQTTRSVVQSIFLVI 363

Query: 359 IIDSLFAIFYFAIGI 373
           + D+LF++ +  + I
Sbjct: 364 VADALFSVLFSILKI 378


>gi|56479165|ref|YP_160754.1| ABC transporter permease [Aromatoleum aromaticum EbN1]
 gi|56315208|emb|CAI09853.1| Possible ABC transport permease [Aromatoleum aromaticum EbN1]
          Length = 374

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 97/372 (26%), Positives = 181/372 (48%), Gaps = 12/372 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
                   R  G+W    ++  AD+    + ++    +A   L  +T +D+ GA L+ + 
Sbjct: 13  GSGARPECRLEGDWTLRALAPRADEFRRLLARA--GPAASWKLDGVTRLDSFGATLLWHA 70

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
             +       Q +S   ++L ++I        +     R+F      +    +G  ++ F
Sbjct: 71  WREQW----PQDLSAD-DELRAVIGRIEATAAEPLPEARAFT---LTDAIVVLGAGLLGF 122

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
            N   +   + G +  +          +   L  +   +Y VG    PV  L+ F+ G V
Sbjct: 123 ANHLAAFVQLAGQLCLDIAYLLRHPRDWP--LREISANLYKVGARATPVAALVGFLIGVV 180

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           ++   A QL  FGA+I+ ++++ +  +RE+G +L +V++AGRSGSA+ A++G M++ +E+
Sbjct: 181 LSYLSALQLQAFGADIYIVNILGLGIVRELGPVLVSVLVAGRSGSAMTAQLGVMRVTDEL 240

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  MG+     L+ P++ AL +++PLL +  +  A+ G  +  W   D+ F  F    
Sbjct: 241 DALSAMGISRTVRLVLPKVVALTVAMPLLVLWTSAVALFGGMVSAWVQLDLGFGFFLDTL 300

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                +AN++ GL K      +I +VA   G  V  ++ SL    T  VV +I++VI+ID
Sbjct: 301 PRVVPVANLYIGLAKGAVFGLSIALVACHFGLRVRPNTESLSANTTASVVSAITVVILID 360

Query: 362 SLFAIFYFAIGI 373
           ++FAI   +IG+
Sbjct: 361 AVFAIATRSIGV 372


>gi|167561346|ref|ZP_02354262.1| ABC transporter, permease protein [Burkholderia oklahomensis EO147]
 gi|167568578|ref|ZP_02361452.1| ABC transporter, permease protein [Burkholderia oklahomensis C6786]
          Length = 374

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 175/366 (47%), Gaps = 11/366 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             R  G W +  ++    +V   I +  +      DLS +  +D +G + +     +  G
Sbjct: 19  TVRLYGQWTALALARDRGNVARRIARLAKEPVGEWDLSGVVRLDHVGGQALW----RVWG 74

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
           +   +G++    Q  ++     R     + P+     +         G+ +  F      
Sbjct: 75  RRLPEGLALTDNQ-RTVFERIERLDEGREAPEPVVRIDPITRF----GQGLFTFGEHLYG 129

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              +LG ++ +                 +   +Y  G   +P+  L++F+ G V++   A
Sbjct: 130 GIGLLGRLVIDLLSVLRRPRTMP--WTEISANVYAAGAKALPITALVAFLIGIVLSYLSA 187

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M
Sbjct: 188 QQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     +  PR+ AL +++PLL +  N  A+ G ++       I    F     S   +
Sbjct: 248 GIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLAIDLNFFVRSLPSVVPI 307

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN++ GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI 
Sbjct: 308 ANLWIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAIL 367

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 368 FQNVGL 373


>gi|315639122|ref|ZP_07894289.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Campylobacter upsaliensis JV21]
 gi|315480826|gb|EFU71463.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Campylobacter upsaliensis JV21]
          Length = 368

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 101/337 (29%), Positives = 166/337 (49%), Gaps = 10/337 (2%)

Query: 40  AIVDLSAITEIDTIGAELIMYF---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96
            I+D   +  ID  G    +     ++K     +   +S   + LF L    +++ +K  
Sbjct: 39  CILDFHHLEFIDMAGVRFFLALEYELQKRGIVSQRVHLSEKFDALFELCEKNYQRILKEP 98

Query: 97  KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156
           K            L  ++G   +  +         +G   +   ++      F+   ++ 
Sbjct: 99  KKHFD-----TAELFVNLGVLSLNLLGILKQFICFVGEFFTAFFQYFKKPKAFR--FIAF 151

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +  +    +  +P+VIL + + G V+A Q AFQL+QFGA IF +DL+ I   RE+  L+ 
Sbjct: 152 LYHIENSALKALPIVILTALLVGVVLAYQAAFQLAQFGANIFIVDLVGISATRELAPLIA 211

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A++IAGRS S+  A+IG MKI +EI A+ TMG      +I PR+ AL++++PL+  +++F
Sbjct: 212 AIVIAGRSASSYTAQIGVMKITDEIAAMNTMGFSTFHFIIIPRVIALVVAMPLIVAVSDF 271

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            +I G  +V     DI F  F  RF     L ++  GLIKAP     IG++A   G  V 
Sbjct: 272 VSIFGGMMVAHLNLDINFIEFLRRFKEAVDLKHVIIGLIKAPIFGFLIGLIACFRGLEVK 331

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
             + S+G   T  VV +I  VI  D+LF++    +GI
Sbjct: 332 HTTQSIGIYTTKSVVNAIFWVIAFDALFSVILTQMGI 368


>gi|313108528|ref|ZP_07794529.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016]
 gi|310881031|gb|EFQ39625.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016]
          Length = 343

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 110/340 (32%), Positives = 179/340 (52%), Gaps = 2/340 (0%)

Query: 33  KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKK 92
           +S  + +A  DLS +  +DT GA L+   +         +   +   +  +L+       
Sbjct: 5   RSEVAGNASFDLSQLGALDTAGAALLAELLGAERLADLAELEPSLPRERQALLKTVGHAL 64

Query: 93  IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGF 152
               +P++     +   L   IG  +  F     +    +GL +            ++  
Sbjct: 65  HDFCEPEKPKPPTTAIELLARIGCAMETFWLHLKALLGFIGLTLETLLRSLVRPASWR-- 122

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           +  L+  +   G+  VP++ L++F+ GAVIA  GA  L+ FGA I++++L+    LRE  
Sbjct: 123 VTPLVANIEKSGLDAVPIIALLTFLVGAVIAFLGATVLANFGATIYTVNLVVFSFLREFA 182

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
           VLLTA+++AGR+ SA  A+IGSMK NEEIDAIR +GL+ + +L+ PR+ AL++SLP+LT 
Sbjct: 183 VLLTAILMAGRTASAFTAQIGSMKANEEIDAIRALGLNPIELLVLPRVLALLVSLPMLTF 242

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           +     I+G   V     DIP A+F S       + +   G+ KAP  A  I ++   EG
Sbjct: 243 VGMLCGIVGGMTVCAWTLDIPPAMFLSIMEDGIGVQHFLVGISKAPLFAFLIAVIGCLEG 302

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           F V   + S+G+  TT VV SI +VI++D+L A+F+  +G
Sbjct: 303 FKVSGSAQSVGEHTTTSVVHSIFVVILLDALAALFFMEMG 342


>gi|134297087|ref|YP_001120822.1| hypothetical protein Bcep1808_2996 [Burkholderia vietnamiensis G4]
 gi|134140244|gb|ABO55987.1| protein of unknown function DUF140 [Burkholderia vietnamiensis G4]
          Length = 374

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 104/372 (27%), Positives = 176/372 (47%), Gaps = 12/372 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            E G TV R  G W +  ++     +   +     +     DLS I  +D +G + +   
Sbjct: 14  GEQGQTV-RLYGQWTALALARNRGAITRRVAGLASARPREWDLSGIERLDHVGGQALW-- 70

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
             +  G+    GV     Q  ++     R   + + P+R   ++    L    G  I  F
Sbjct: 71  --RVWGRKLPAGVELSDTQ-RTIFERIERLDSQREAPERVVRFDPVTRL----GLAIFTF 123

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                    + G VI +                     +Y  G   +P+  L++F+ G V
Sbjct: 124 GEHLQGGIAMFGRVILDALSVLRRPQTMP--WKETSANIYSAGAQALPITALVAFLIGIV 181

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           ++   A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A IG M++ EE+
Sbjct: 182 LSYLSAQQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITARIGVMRVTEEL 241

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+R MG+     L+ PR+ AL +++PLL +  N  A+ G ++       I F  F    
Sbjct: 242 DAMRVMGIPHGLRLVLPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLAIDFNYFVRSL 301

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                +AN++ G+ K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D
Sbjct: 302 PGVVPIANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILAD 361

Query: 362 SLFAIFYFAIGI 373
           ++FAI +  +G+
Sbjct: 362 AVFAILFQNVGL 373


>gi|167617722|ref|ZP_02386353.1| ABC transporter, permease protein [Burkholderia thailandensis Bt4]
 gi|257140414|ref|ZP_05588676.1| ABC transporter, permease protein [Burkholderia thailandensis E264]
          Length = 374

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 175/366 (47%), Gaps = 11/366 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             R +G W +  ++    +V   I +  +      DLS +  +D +G + +     +  G
Sbjct: 19  TVRLSGQWTALALARDRGNVARRIARLAKEPVGEWDLSGVDRLDHVGGQALW----RVWG 74

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
           +    G++    Q  ++     R     + P+     +         G+ +  F      
Sbjct: 75  RRLPAGIALTDNQ-RTVFERIERLDAGREAPEPVVRIDPVTRF----GQGLFTFGEHLYG 129

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              +LG +I +                 +   +Y  G   +P+  L++F+ G V++   A
Sbjct: 130 GIALLGGLIVDLLSVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIVLSYLSA 187

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M
Sbjct: 188 QQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     +  PR+ AL +++PLL +  N  A+ G ++       I    F     S   +
Sbjct: 248 GIPHGLRITLPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDLNFFVRSLPSVVPI 307

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN+F GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI 
Sbjct: 308 ANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAIL 367

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 368 FQNVGL 373


>gi|307720548|ref|YP_003891688.1| hypothetical protein Saut_0627 [Sulfurimonas autotrophica DSM
           16294]
 gi|306978641|gb|ADN08676.1| protein of unknown function DUF140 [Sulfurimonas autotrophica DSM
           16294]
          Length = 368

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 108/373 (28%), Positives = 188/373 (50%), Gaps = 14/373 (3%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           + ++G++   F+G      +++     ++  NK   S   I++L+    +DT  A  +  
Sbjct: 10  VQKDGLS-LDFSGELTLYNLTQ--AQNLIETNKLSNSQKIIINLANAQYLDTAFALFLTD 66

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
             E+Y+ +I+      +      L     ++   N    +       K++  + GK   +
Sbjct: 67  IQEEYNAEIECNN--KNFLHTLELTREHKKRLDSNDDIHK-------KSIFEYFGKIFYE 117

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
                 S    +G +  +   +  S    +  +  +  ++    V  + +V L SF+ G 
Sbjct: 118 SYLSFISFMEFIGKIFISFLLYFKSIKNIR--IKEIAFEINESAVRALGIVALTSFLIGL 175

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V A Q A+QL ++G  IF +D+M I   RE+  L+TA++IAGRSGSA  A+IG+MKI +E
Sbjct: 176 VTAYQAAYQLQRYGGNIFIVDMMGISVFRELAPLITAIVIAGRSGSAYTAQIGAMKITQE 235

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+RTMG D    L+ PRI ALII LP+L  +++  A++G  IV     D+  ++F +R
Sbjct: 236 IDAMRTMGFDPYTFLVLPRIIALIIMLPILIFVSDMMAMLGGIIVADLSLDLIPSLFINR 295

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                 + + + GL+K PF A  I  + +  G  V   + S+G   T  VV+S+  VI+ 
Sbjct: 296 LSEVVAIKHFYVGLVKGPFFAFLIASIGIYRGLMVKDDTQSIGFNTTKSVVESLFAVIVC 355

Query: 361 DSLFAIFYFAIGI 373
           D++F+I +  +GI
Sbjct: 356 DAIFSIAFTNLGI 368


>gi|163744195|ref|ZP_02151555.1| ABC transporter, inner membrane subunit [Oceanibulbus indolifex
           HEL-45]
 gi|161381013|gb|EDQ05422.1| ABC transporter, inner membrane subunit [Oceanibulbus indolifex
           HEL-45]
          Length = 376

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 130/370 (35%), Positives = 209/370 (56%), Gaps = 13/370 (3%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME-- 63
            +     G+    +++ +  D +     S    ++++D++ +  IDT GA +++      
Sbjct: 18  GSRLSICGDLDIGKVACLDRDWLH----SEMHGASVIDIAGLARIDTAGAWVLIDLQAHA 73

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
              G   L+G +    QL   +  +         P +S       +    +G+ +V   +
Sbjct: 74  TVPGGAALEGATQAQAQLIETVRRSMLSDAVAAPPTKS-----VGDRLEILGRTVVLGAH 128

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
            + +    LG V++  G   A   + +  L SL+     VG++ VP+V L+SF+ G V+A
Sbjct: 129 KTVALISFLGQVVATMGGILAHPSRLR--LTSLVHHCQEVGLNAVPIVALMSFLIGVVLA 186

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
            QGA QL QFGAE+F +DL++I  LRE+G+LLTA+++AGRSGSA  A IGSMK+ EE+DA
Sbjct: 187 FQGAAQLRQFGAEVFVVDLIAISVLRELGILLTAIIVAGRSGSAFTAAIGSMKMREEVDA 246

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +RT+GLD V IL+ PR+ AL++ LP L  +A+ S ++G +I+ W    +  AVF  R  S
Sbjct: 247 MRTIGLDPVTILVVPRVLALMLMLPALGFIADISGLLGGAIMSWIDLGVSPAVFQMRLTS 306

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              + +   G+IKAPF A  IGI+   EG  VG  + SLG+  +T VV SI +VI+ D++
Sbjct: 307 NTDVWHFGVGMIKAPFFALIIGIIGCFEGLKVGGDAESLGRLTSTSVVLSIFMVIVADAM 366

Query: 364 FAIFYFAIGI 373
           F+IF+  +G+
Sbjct: 367 FSIFFAIVGV 376


>gi|224371971|ref|YP_002606137.1| ABC-type transporter, permease protein [Desulfobacterium
           autotrophicum HRM2]
 gi|223694690|gb|ACN17973.1| ABC-type transporter, permease protein [Desulfobacterium
           autotrophicum HRM2]
          Length = 373

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 108/372 (29%), Positives = 179/372 (48%), Gaps = 15/372 (4%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY----F 61
            T    +G+     +S++ +    A+     +   ++DL  +  +D+ GA L+ +    +
Sbjct: 13  GTTVTLSGSLDIAGVSKVWEKAEKAL---FGTGDLVIDLKRVDHMDSAGAALVWFIKTTW 69

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
            ++  GKI + G+    +Q+  L       +                +     GK     
Sbjct: 70  KQRTGGKISVLGLKPAFKQVMDLTETIPDTRDGE-----KKPKKKPPSFVETRGKNFADQ 124

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           +  + S   ++G +              +      +      GV+ +P+V LISF+ G V
Sbjct: 125 MEKATSFIALVGQITRALIHAFFHPLSVR--WKDALLTAERSGVNALPIVALISFIVGLV 182

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A Q A  +  FGAEI+  +L+ I  +RE+G L+TA+++AGRSGSA  AEIG+MKINEEI
Sbjct: 183 MAFQAAMPMKMFGAEIYVANLIGIAMVRELGPLMTAIILAGRSGSAFAAEIGTMKINEEI 242

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+ TMGLD VR L+ PRI A +   PLLTI +NF  I+G SIV+      P   ++S+ 
Sbjct: 243 DALSTMGLDPVRFLMVPRILAAVFITPLLTIFSNFVGIMGGSIVL-LSMGYPAITYYSQV 301

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            S  T  +   GL+K       I       G        ++G   T+ VV  I+++ + D
Sbjct: 302 ISFVTWIDFTGGLVKCFVFGILISAAGCIRGIETQSGPGAVGASTTSAVVTGITLIAVFD 361

Query: 362 SLFAIFYFAIGI 373
            +F++ ++ +GI
Sbjct: 362 GIFSVLFYCLGI 373


>gi|241668212|ref|ZP_04755790.1| ABC-type transport system permease protein [Francisella
           philomiragia subsp. philomiragia ATCC 25015]
 gi|254876747|ref|ZP_05249457.1| ABC transporter, permease protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842768|gb|EET21182.1| ABC transporter, permease protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 365

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 106/350 (30%), Positives = 179/350 (51%), Gaps = 4/350 (1%)

Query: 17  SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVST 76
              + +I   ++       + D   +DL+ +T +DT GA +I+   +    ++  + +  
Sbjct: 15  ILTLKQIDSKLIDKKISRSKDDIKQIDLTKVTLLDTAGAYIIIKTAKNL--RLSKENIIF 72

Query: 77  HIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVI 136
             E+  +L+    +      + + S   N   N  Y +GK     +++  +    LG + 
Sbjct: 73  ANEKDKNLVDIVFKNFPSTAEEELSNKSNVVFNSIYTLGKNTNNLLSEVKTSISFLGAIF 132

Query: 137 SNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE 196
                       +K F   ++   Y   +  + +VIL+S + G V+       L Q+G +
Sbjct: 133 LGYITLIRRP--YKAFFSIVLNICYDSTIRALSIVILLSLIIGLVLTYLPLNLLMQYGTQ 190

Query: 197 IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILI 256
           IF +D++ I   RE   L TA++IAGRSGSA  +EIG MK+NEEIDA++T+G D ++ L+
Sbjct: 191 IFVVDMLGISSFREFAPLFTAIIIAGRSGSAFTSEIGIMKVNEEIDALQTIGEDPMQRLV 250

Query: 257 SPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316
            PRI AL+ISLP+LT++A  + I G  I+      I    F  R  S   + + + GL+K
Sbjct: 251 LPRITALVISLPVLTVIAMIANIAGGIIIADLIAGITPLQFIERLFSNVNVNHFYIGLLK 310

Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
            PF A  I  +   +G +V   S S+GK  TT VV SI ++I++D++FA+
Sbjct: 311 TPFFALVIAGIGCHQGLSVKRDSQSVGKATTTSVVYSIFLIILVDAIFAV 360


>gi|301057238|ref|ZP_07198367.1| conserved hypothetical protein [delta proteobacterium NaphS2]
 gi|300448689|gb|EFK12325.1| conserved hypothetical protein [delta proteobacterium NaphS2]
          Length = 352

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 106/357 (29%), Positives = 182/357 (50%), Gaps = 12/357 (3%)

Query: 19  EISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---KYHGKIKLQGVS 75
               +  ++     ++   D   VDL  +T +D  G  +++   +   K HG   L+   
Sbjct: 5   NAGSLIQELSQHFAENPPGD-LTVDLENVTYLDDFGTLVLVELRKLAAKEHGAFNLENTG 63

Query: 76  THIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLV 135
             I ++   ++F       +   + SF     + +   +G+K    I D       +G +
Sbjct: 64  KKIREMLMFLNF------DSLFQKVSFEKKRRQGIFVRLGEKTFDIILDLKYAISFIGAI 117

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
             + G   A     +      +  M   GV G+P+V LISF+ G ++A   + QL QFGA
Sbjct: 118 TLSLGYHLAHPRALRKD--DTLDYMQKTGVDGLPIVALISFLMGLIMAFMSSVQLEQFGA 175

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
            I+   L+S+   RE+G ++TA+++AGRSGSA  AEIG+MKI+EE+DA+ TMG D V  L
Sbjct: 176 NIYVASLVSLAMTRELGPIMTAIIVAGRSGSAFAAEIGTMKISEEVDALYTMGFDPVGFL 235

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + P++ A +I +P+LT+ ++  AI G  +V     D+    + ++  +T  L ++F G++
Sbjct: 236 VIPKLIAALIMVPILTLFSDIFAIAGGLLVGVFMLDLTVGAYVAQTINTLALFDVFWGVL 295

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           K+   A  I  V    GF V   + S+G+  T+ VV SI ++I+ DS+F++     G
Sbjct: 296 KSGVFALLITWVGCLRGFQVSGGAASVGQATTSAVVSSIFLIILFDSVFSVVLRYTG 352


>gi|167585308|ref|ZP_02377696.1| hypothetical protein BuboB_08232 [Burkholderia ubonensis Bu]
          Length = 374

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 99/368 (26%), Positives = 175/368 (47%), Gaps = 11/368 (2%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
               R  G W +  ++     V   +    +      DLS I  ID +G + +     + 
Sbjct: 17  GPTVRLYGQWTALALARNRGAVARRVAGLAKGRVREWDLSGIERIDHVGGQALW----RV 72

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
            G+    G++    Q  ++     R   + + P+R    +    L    G+ +  F    
Sbjct: 73  WGRKLPDGIALSETQ-RTIFERIERLDRQREAPERIERIDPVTRL----GRALFTFAEHL 127

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                + G V+ +                     +Y  G   +P+  L++F+ G V++  
Sbjct: 128 QGGIAMFGRVMLDALSVLRRPKTMP--WKETSANVYSAGAQALPITALVAFLIGIVLSYL 185

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R
Sbjct: 186 SAQQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMR 245

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MG+     L+ PR+ AL +++PLL +  N  A+ G ++       I F+ F        
Sbjct: 246 VMGIPHGLRLVLPRVLALGVAMPLLVMWTNIIALTGGALAAKLALGIDFSFFVRSLPGVV 305

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            +AN++ GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FA
Sbjct: 306 PIANLYIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFA 365

Query: 366 IFYFAIGI 373
           + +  +G+
Sbjct: 366 MLFQNVGL 373


>gi|167579644|ref|ZP_02372518.1| ABC transporter, permease protein [Burkholderia thailandensis
           TXDOH]
          Length = 374

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 175/366 (47%), Gaps = 11/366 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             R +G W +  ++    +V   I +  +      DLS +  +D +G + +     +  G
Sbjct: 19  TARLSGQWTALALARDRGNVARRIARLAKEPVGEWDLSGVDRLDHVGGQALW----RVWG 74

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
           +    G++    Q  ++     R     + P+     +         G+ +  F      
Sbjct: 75  RRLPAGIALTDNQ-RTVFERIERLDAGREAPEPVVRIDPVTRF----GQGLFTFGEHLYG 129

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              +LG +I +                 +   +Y  G   +P+  L++F+ G V++   A
Sbjct: 130 GIALLGGLIVDLLSVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIVLSYLSA 187

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M
Sbjct: 188 QQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     +  PR+ AL +++PLL +  N  A+ G ++       I    F     S   +
Sbjct: 248 GIPHGLRITLPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDLNFFVRSLPSVVPI 307

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN+F GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI 
Sbjct: 308 ANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAIL 367

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 368 FQNVGL 373


>gi|270159818|ref|ZP_06188474.1| putative ABC transporter permease [Legionella longbeachae D-4968]
 gi|289165424|ref|YP_003455562.1| ABC transporter permease protein [Legionella longbeachae NSW150]
 gi|269988157|gb|EEZ94412.1| putative ABC transporter permease [Legionella longbeachae D-4968]
 gi|288858597|emb|CBJ12478.1| putative ABC transporter permease protein [Legionella longbeachae
           NSW150]
          Length = 375

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 187/373 (50%), Gaps = 14/373 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61
           +     +   G W   +I  +      + ++  ++    +    I+  D+ GA  ++   
Sbjct: 11  DKERIRYHCTGIWSVLQIDSLVKRF--SADELPETKKVTISGEGISHFDSAGALALIKCI 68

Query: 62  --MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
             +E+   +++L   +   +QL  LI  + +  +    P         +NL Y +GK+  
Sbjct: 69  DKLEQRENQVELTDFTETQQQLLELI-KSKKDILDYHIPS-----APKENLFYQLGKESE 122

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                      ++G + +   E   +  +F+  L S+I  +Y  GV+ +P++ L+SF+ G
Sbjct: 123 NKFRQVDGLLVLVGDLTTKIIEAFGNWRRFQ--LPSIISNIYTTGVTALPILALLSFLIG 180

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A Q   QL  +GA  F   L  +   RE   L+TA+++AGR+ SA  A+IGSMK+NE
Sbjct: 181 VVLAYQMGLQLQTYGANSFIAYLSGMAIFREFAPLITAIIVAGRTSSAFTAQIGSMKLNE 240

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DA+ TMGL    +L+ P++  L+I+ PLL   ++  +I+G+ I+      I F  F  
Sbjct: 241 EVDALLTMGLSPTELLVLPKVIGLLIAFPLLIFWSDLFSILGSMIMSNNMLGINFTDFLQ 300

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN-SLGKKVTTCVVQSISIVI 358
           R   T  L+ +  GL KAP  A  I +V   +GF V   +  ++G + T  VVQ++ ++I
Sbjct: 301 RLRDTVGLSQLNLGLYKAPAFALLIALVGCFQGFKVEAGTEKNIGSQTTKSVVQALFLII 360

Query: 359 IIDSLFAIFYFAI 371
           I D+++++ Y  +
Sbjct: 361 IADAIYSVIYSRM 373


>gi|88810292|ref|ZP_01125549.1| hypothetical protein NB231_14468 [Nitrococcus mobilis Nb-231]
 gi|88791922|gb|EAR23032.1| hypothetical protein NB231_14468 [Nitrococcus mobilis Nb-231]
          Length = 364

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 95/363 (26%), Positives = 183/363 (50%), Gaps = 17/363 (4%)

Query: 11  FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH---G 67
            +G+W    ++ +   +    N  + S    ++L  I+ +DT GA ++     +      
Sbjct: 12  CSGDWSVERLAAVERQIRR--NAPMTSGEWRINLGEISTLDTAGAVMVQRLCRRLRTAGA 69

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
            ++L+ VS     +  L++       +            + N    +G+++         
Sbjct: 70  SVQLEDVSAERHAVLKLVASEMEVTPRRP----------YSNPLERLGRRVTDGCFGITE 119

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +G + +++       ++ +     +  ++   GV  +P++ L++F+ G V+A Q  
Sbjct: 120 YLAFIGRLTADSLPRMLRPHRLR--WHEIAVELERAGVMAIPIIGLLAFLIGIVMAYQSG 177

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L  +GA IF +DL+ ++ LRE+G L+TAV++AGR+G++  A+IG+M + EE+DA+RTM
Sbjct: 178 DILQTYGANIFLVDLLGVIILREMGPLMTAVIVAGRTGASYTAQIGTMHLTEEVDALRTM 237

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+    +L+ P+  AL+I+LPLLT+ A+   ++G  +V    Y + F VF  R  +    
Sbjct: 238 GVTPFEMLVLPKFLALLIALPLLTVWADAIGLLGGMLVSSLLYGVDFDVFLRRLPTAVPP 297

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
              + G+ KAP  A  I  +   +GF +   ++ +G+  T  VVQ I  VI+ D++F+I 
Sbjct: 298 NMFWVGIAKAPVFAALIASIGCYQGFRIRYSADEVGRYTTISVVQGIFWVIVADAVFSIV 357

Query: 368 YFA 370
            F+
Sbjct: 358 LFS 360


>gi|296388302|ref|ZP_06877777.1| ABC transporter permease [Pseudomonas aeruginosa PAb1]
          Length = 343

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 110/340 (32%), Positives = 178/340 (52%), Gaps = 2/340 (0%)

Query: 33  KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKK 92
           +S  + +A  DLS +  +DT GA L+   +         +       +  +L+       
Sbjct: 5   RSEVAGNASFDLSQLGALDTAGAALLAELLGAERLADLAELEPGLPRERQALLKTVGHAL 64

Query: 93  IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGF 152
               +P++     +   L   IG  +  F     +    +GL +            ++  
Sbjct: 65  HDFCEPEKPKPPTTAIELLARIGCAMETFWLHLKALLGFIGLTLETLLRSLVRPASWR-- 122

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           +  L+  +   G+  VP++ L++F+ GAVIA  GA  L+ FGA I++++L+    LRE  
Sbjct: 123 VTPLVANIEKSGLDAVPIIALLTFLVGAVIAFLGATVLANFGATIYTVNLVVFSFLREFA 182

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
           VLLTA+++AGR+ SA  A+IGSMK NEEIDAIR +GL+ + +L+ PR+ AL++SLP+LT 
Sbjct: 183 VLLTAILMAGRTASAFTAQIGSMKANEEIDAIRALGLNPIELLVLPRVLALLVSLPMLTF 242

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           +     I+G   V     DIP A+F S       + +   G+ KAP  A  I ++   EG
Sbjct: 243 VGMLCGIVGGMTVCAWTLDIPPAMFLSIMEDGIGVQHFLVGISKAPLFAFLIAVIGCLEG 302

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           F V   + S+G+  TT VV SI +VI++D+L A+F+  +G
Sbjct: 303 FKVSGSAQSVGEHTTTSVVHSIFVVILLDALAALFFMEMG 342


>gi|315498539|ref|YP_004087343.1| hypothetical protein Astex_1526 [Asticcacaulis excentricus CB 48]
 gi|315416551|gb|ADU13192.1| protein of unknown function DUF140 [Asticcacaulis excentricus CB
           48]
          Length = 377

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 105/363 (28%), Positives = 172/363 (47%), Gaps = 6/363 (1%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           V    G+W +  + +  + +  A+  +        DL      DT GA  +   +     
Sbjct: 18  VVSLTGDWTAIGLRDAGERLKSALKSASAVRVETDDLKG---FDTAGAYALRTALGALGD 74

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
                     +  ++ LI     + ++ QK       +        +G+      ND   
Sbjct: 75  DALFSH-DPRLSAVYELIRDIQPQVVEAQKKTAQQKAHPIIAELAQLGRNTEDVFNDLRD 133

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +G +I        +  + +     L+ QM   G   + VV + +F  GAVIA  G 
Sbjct: 134 LNVFIGQLIVTAFMSLVTPGRIR--WTPLVAQMQQAGFGALMVVCVTNFFVGAVIAFLGI 191

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL QFGA +F+++L+ I  LRE G ++ AV+IAGRS S+  AEIG+MK+N+EI A+R M
Sbjct: 192 LQLQQFGAAVFAVELIGISVLREFGPVIAAVLIAGRSASSFTAEIGAMKMNQEISAMRVM 251

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    LI PR+ AL++++PL+T   + + ++G  +V+W         F  R       
Sbjct: 252 GINPFDALIFPRLAALVLTMPLITFAGSMAGLLGGFVVVWAQLGYGPHFFSIRMTEYVPF 311

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            N F G+IK P  A AI I+  + G  V     SLG++VT  VVQ+I  +I+ID++ A+ 
Sbjct: 312 VNFFVGMIKVPLFAIAITIIGCRLGMNVTEDVISLGRQVTRAVVQAIFTIILIDAIVAMM 371

Query: 368 YFA 370
           +  
Sbjct: 372 FNG 374


>gi|302342029|ref|YP_003806558.1| hypothetical protein Deba_0592 [Desulfarculus baarsii DSM 2075]
 gi|301638642|gb|ADK83964.1| protein of unknown function DUF140 [Desulfarculus baarsii DSM 2075]
          Length = 380

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 177/366 (48%), Gaps = 11/366 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            G       G     ++ E     +  + K +   S ++DLS +  +DT GA  +  +  
Sbjct: 19  GGDLHVSLRGRLGVNQLPE-FQTAIARVLKELAPRSVLLDLSRLDYLDTSGAMAVKIWAA 77

Query: 64  KYHGK--IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
                  ++L+   +    + +LI     +K      +R         +   +G+   + 
Sbjct: 78  APPQDLAVRLEAGQSRFRDMLALIDVDQVRKPAINPDKRD------AGMLEGMGQSARRM 131

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                     +G    +     A     +  +  ++  M  VGV G+P+V LI  + G +
Sbjct: 132 GEQIGQLLAFVGQATKSVLMVVARPATLR--MGDVLAYMQQVGVDGLPIVSLIGLLLGMI 189

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A   + QL  FGA+++   L+++  +RE+G ++TA+++AGRSGS+  AEIG+MK+NEE+
Sbjct: 190 MAFMSSLQLKSFGADVYVATLVAVAMVRELGPIMTAILVAGRSGSSFAAEIGTMKVNEEV 249

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  MG D V  L  P++ A ++ +PLLT+ +  +AI+G  IV     D+    + +  
Sbjct: 250 DALTVMGYDPVIFLALPKVIAAVLMVPLLTLFSIAAAIMGGLIVGVAGLDLTPYTYLNES 309

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            S+    ++ T + KA      I ++  ++GF V   +  +GK  T+ VV ++ ++I+ D
Sbjct: 310 ISSFDAGDLMTSMFKAAVFGLLIAVIGCQKGFTVEGGAAGVGKATTSAVVAALFLIIVTD 369

Query: 362 SLFAIF 367
           S+FAI 
Sbjct: 370 SVFAII 375


>gi|167717852|ref|ZP_02401088.1| ABC transporter, permease protein [Burkholderia pseudomallei DM98]
          Length = 374

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 101/372 (27%), Positives = 176/372 (47%), Gaps = 12/372 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
              G TV R  G W +  ++    +V   I +  +      DLS +  +D +G + +   
Sbjct: 14  GSQGRTV-RLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALW-- 70

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
             +  G+    G++    Q   +     R     + P+     +         G+ +  F
Sbjct: 71  --RVWGRRLPDGIALTDNQRV-VFERIERLDAGRESPEPVVRIDPVTRF----GQGLFTF 123

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                    +LG +I +                 +   +Y  G   +P+  L++F+ G V
Sbjct: 124 GEHLYGGIALLGSLIVDLLAVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIV 181

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           ++   A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+
Sbjct: 182 LSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEEL 241

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+R MG+     +  PR+ AL +++PLL +  N  A+ G ++       I    F    
Sbjct: 242 DAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSL 301

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            S   +AN+F GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D
Sbjct: 302 PSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILAD 361

Query: 362 SLFAIFYFAIGI 373
           ++FAI +  +G+
Sbjct: 362 AVFAILFQNVGL 373


>gi|289208500|ref|YP_003460566.1| hypothetical protein TK90_1322 [Thioalkalivibrio sp. K90mix]
 gi|288944131|gb|ADC71830.1| protein of unknown function DUF140 [Thioalkalivibrio sp. K90mix]
          Length = 382

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 191/370 (51%), Gaps = 16/370 (4%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQS--DSAIVDLSAITEIDTIGAELIMYF---ME 63
            + +G      +  +   +     +  +    +  +D+  +   D  GA L+      +E
Sbjct: 24  LQLSGRLDVHAVERVWSPLRRRARELAEGTQAAVTLDVGGLEYCDGAGAALLHALERDIE 83

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           +   +++L GV   +E+       T  ++++  +P R   + +   L     + + +   
Sbjct: 84  RAGRQVELVGVQGLVEE-----QLTPYRELETVEPAR---HETRGGLLAQSFEAVSRVGQ 135

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
            + SQ   +G +    G    +  + +       R     G   +P+V LI+F+ G ++A
Sbjct: 136 AAYSQFGFIGELTRALGSALLNPRQVR--WGDTFRVAEAAGFQALPIVSLIAFLLGVILA 193

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
            Q A  + QFG EIF  +L+++   RE+G L+ A+++AGRSG+A  AEIG+MK+NEE++A
Sbjct: 194 FQSAIAMRQFGGEIFVANLVAVSLFRELGPLMMAILLAGRSGAAFAAEIGTMKVNEEVNA 253

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           ++TMGLD VR L+ P++ A I+  PLL + AN   ++GA++V+  +  IP+  FF++   
Sbjct: 254 LKTMGLDPVRFLVLPKVLAGILVAPLLALYANMIGLLGAAVVMQGF-GIPWTAFFNQVTV 312

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             +L+++F+GL KA      I  V    G      + ++G   T+ VV SI ++++ D L
Sbjct: 313 ALSLSDLFSGLFKAVIFGLLIAGVGCLRGLQTASGAAAVGISTTSAVVTSIILIVVFDGL 372

Query: 364 FAIFYFAIGI 373
           FA+ ++ +G+
Sbjct: 373 FAVLFYHMGV 382


>gi|317153918|ref|YP_004121966.1| hypothetical protein Daes_2214 [Desulfovibrio aespoeensis Aspo-2]
 gi|316944169|gb|ADU63220.1| protein of unknown function DUF140 [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 431

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 93/376 (24%), Positives = 174/376 (46%), Gaps = 14/376 (3%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           ++  G   F   G   +P  + + D+    +  +    +   D S I  +D  G  L++ 
Sbjct: 67  VTGAGQLRFEIRGRLDAPGTAHVWDEASR-VASAGSGGAVEADCSGIEYMDGSGMALLLK 125

Query: 61  FME---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
             E   +  G + L  ++    QL  L             P  +   +  + L   +G+ 
Sbjct: 126 LREVVAEAGGTLSLVNLAPRHRQLIDLTG-------DRPLPGWNPADSERRGLAERVGRA 178

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
               +         +G              + +     ++    +VGV  + ++ L+ F+
Sbjct: 179 TRDALTGIREMVEFVGEASVIITRSLLHPSRVR--WKDVLLSCVHVGVDSLFIISLLGFL 236

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G +++ Q A  L +FG EIF  +++ ++  RE+G L+TA+++A RSGSA  AEIG+MKI
Sbjct: 237 MGLIMSFQSAISLQRFGGEIFVPNMLGLVMFREMGPLVTAILLAARSGSAFAAEIGTMKI 296

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
           NEE+DA+ TMGL  +R L+ P++ + +  +PL+T+  N ++++G ++V+      P   F
Sbjct: 297 NEELDALTTMGLSPMRFLVVPKLLSALAMVPLMTLFFNLASLVGGALVM-LSLGFPLVTF 355

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            SR  S    ++ F G+ KA   +  +  V    G      ++++G   T+ VV  I  +
Sbjct: 356 TSRVFSYVHYSDFFGGMAKALVFSILVAGVGCLRGMQTRSGASAVGLSTTSAVVTGIIFI 415

Query: 358 IIIDSLFAIFYFAIGI 373
              D LFA+ ++ + I
Sbjct: 416 AFADGLFAVAFYYLKI 431


>gi|89902676|ref|YP_525147.1| hypothetical protein Rfer_3917 [Rhodoferax ferrireducens T118]
 gi|89347413|gb|ABD71616.1| protein of unknown function DUF140 [Rhodoferax ferrireducens T118]
          Length = 376

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 95/368 (25%), Positives = 182/368 (49%), Gaps = 15/368 (4%)

Query: 10  RFAGNWKSPEISEIAD----DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
           R +G+W +  ++E A+       +A+  +  +     DL  +  +D  GA+++     + 
Sbjct: 20  RLSGDWSAARLAEPANWASLQSGLALGAAGAALEVSWDLRDLQRLDHTGAQVLWNAWGRQ 79

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
             +  L  +      + S +            P       S   L   +G  +   I+  
Sbjct: 80  WPRQLL--IEPAQRAMLSRVEQ-------YALPPPVARRTSAWQLFLALGALVWLLIDHL 130

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                +LG ++ +T     +    KG    +   ++ +G + +P+  L+ F+ G V+A  
Sbjct: 131 RDATRLLGQLLLDTLRLLRAPA--KGPWRDVSGHLFSIGATALPITALLGFLIGVVLAYL 188

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            + QL QFGA+ F ++++ +  +RE+G +L A++IAGRSGS I A+IG M++ EE+DA+R
Sbjct: 189 MSLQLRQFGADSFIVNILGLSVIRELGPVLAAILIAGRSGSTITAQIGVMRVTEELDAMR 248

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MG+     L+ PR  A+ +++PLLT+  + +A++G  +       +  A FF+      
Sbjct: 249 VMGIAKGYRLVLPRAIAMALAMPLLTVWTSLAALLGGMLAADLTMGVTPAYFFAALPRAV 308

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            ++N+   + K+      I ++    G  V  ++ SLG+  T  VV SI++VI++D++FA
Sbjct: 309 EVSNLTLAMGKSVVFGLLIALIGCHYGLRVKPNTESLGQGTTASVVTSIAMVILVDAVFA 368

Query: 366 IFYFAIGI 373
           + +  IGI
Sbjct: 369 LVFKDIGI 376


>gi|187476645|ref|YP_784668.1| membrane protein [Bordetella avium 197N]
 gi|115421231|emb|CAJ47736.1| putative membrane protein [Bordetella avium 197N]
          Length = 377

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 171/367 (46%), Gaps = 12/367 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM-EKYH 66
           V    G+W    ++            +        DL  I  +DTIGA L+     E+  
Sbjct: 22  VVYLGGDWSLQALAVRGQVQARRDALAQTHAHTRWDLRGIQRLDTIGANLLWRLWGERLP 81

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
            +++L   +    ++F+ ++                 +         IG+ I    ++  
Sbjct: 82  ERVRL---TDGQREVFNALAVNPGAVAPAPPVTDRLSW------VRAIGQAIFDAAHNGI 132

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
               +LG ++ +           +G    +  Q+Y  G   + +  L+ F+ G V++   
Sbjct: 133 MLLRMLGQLVLDFIGLLLRPS--RGPWREISAQIYRTGAQALGITALVGFLIGVVLSYLS 190

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A QL  FGA+ F + L+ +  +RE+G +L A+++AGRSGSAI A+IG M++ +E+DA+  
Sbjct: 191 AQQLQMFGADRFIVRLLGVSIVRELGPVLAAILVAGRSGSAITAQIGVMRVTQELDAMSV 250

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG+   + LI PR+ AL I++PLL +  +  A++G  +       I    F     +  T
Sbjct: 251 MGISQSQRLILPRVVALAITMPLLVLWTDAMALLGGMLAAQMQLGISAQWFLESLPNAVT 310

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           + N + G++K       I +VA   G  +   + SLG+  TT VV SI+ VI++D+L+A+
Sbjct: 311 ITNYWIGMVKGVSFGVLIALVACHFGLRIKPDTESLGRGTTTSVVTSITGVILVDALYAV 370

Query: 367 FYFAIGI 373
               +GI
Sbjct: 371 ILSGMGI 377


>gi|329890329|ref|ZP_08268672.1| hypothetical protein BDIM_20300 [Brevundimonas diminuta ATCC 11568]
 gi|328845630|gb|EGF95194.1| hypothetical protein BDIM_20300 [Brevundimonas diminuta ATCC 11568]
          Length = 372

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 106/373 (28%), Positives = 192/373 (51%), Gaps = 12/373 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S++G T  R AG+W +  +  + D +   ++         +DL  +   DT GA  +   
Sbjct: 11  SQDGQTRLRLAGDWSTVAVGRMGDRLKAELD---GRSVTALDLDDLGRFDTAGALAVAQA 67

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
           M +   +     V     +L+ +++      +  + P+RS            +G+ +  F
Sbjct: 68  MSRPIPESAWS-VRPEAGRLYRMVAKLD--CMTAEPPRRSA---PMTRGFAKVGRGVYDF 121

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             ++      LG +++          + +    +   Q    G+  +P+V++ +F  GAV
Sbjct: 122 GAEAMLSLAFLGRLMAAVLTTLKHPGRIR--WAAWFSQAERTGLDAIPIVVVTNFFIGAV 179

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A  G   L+QFGA +F++ L+ +   RE  V++TAV++AGRS S+  AEIGSM++ +E+
Sbjct: 180 VAFIGVDLLTQFGAGVFTVQLIGVAVFREFAVVITAVLLAGRSASSFAAEIGSMRMTQEV 239

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA++ MG+D  + L+ PR+ AL++ LPLLT LA    ++G  +V W   ++  A FF R 
Sbjct: 240 DAMKVMGVDPFQALVIPRLAALLVMLPLLTFLAMVGGLLGGVLVAWSQLNLGPAFFFQRL 299

Query: 302 -HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                   ++  GLIKAP  A  +  +  ++G +V     SLG++VT  VVQ+I  +I++
Sbjct: 300 VEDGYMPTHMMVGLIKAPVFALVVAAIGCRQGMSVAGDVESLGRRVTAAVVQAIFAIILL 359

Query: 361 DSLFAIFYFAIGI 373
           D++FA+ +  + I
Sbjct: 360 DAVFALIFIELKI 372


>gi|254524872|ref|ZP_05136927.1| ABC transporter permease [Stenotrophomonas sp. SKA14]
 gi|219722463|gb|EED40988.1| ABC transporter permease [Stenotrophomonas sp. SKA14]
          Length = 370

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 114/364 (31%), Positives = 192/364 (52%), Gaps = 13/364 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           + R +G W        A+     + + +      +D + I ++D+ G   ++    +   
Sbjct: 18  LIRLSGTWTLKTALAAAE-----VLRGVPEKLTGIDATGIEQMDSAGVLQVLRVAHR--A 70

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
            +    +    +   +L+           KP+R F           +G  +    ++  +
Sbjct: 71  DLGEDALHFRQDH-QALVCTIEEVADDRPKPKRDF---GVLAALERLGVSVHATGHNIKA 126

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               LG  +           +F+  L + + QM  VG+  VP+V L+S++ GAVIA  G+
Sbjct: 127 LCSFLGENLVKAARLVKEPRRFR--LTATVHQMEQVGLDAVPLVALLSYLVGAVIAFLGS 184

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L  FGAEI+ ++L++I  LRE  VLLTA+++AGR+ SA  A+IG+MK  EEIDA+RT+
Sbjct: 185 TILRDFGAEIYVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKAREEIDAMRTL 244

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GLD V +L+ PR+ AL+++LPLLT +A  + + G   V     DIP  ++ +R H T  +
Sbjct: 245 GLDPVDLLVLPRLLALLVTLPLLTFIAMVAGLAGGITVGAFDLDIPPQMYIARMHETMEV 304

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            ++  GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VIIID+  A++
Sbjct: 305 RHMLVGLSKAPVFALVIGLIGCLEGLKVEGTAQSVGERTTSSVVQTISLVIIIDAFAALW 364

Query: 368 YFAI 371
           +  +
Sbjct: 365 FMHM 368


>gi|190572714|ref|YP_001970559.1| putative ABC transporter permease [Stenotrophomonas maltophilia
           K279a]
 gi|190010636|emb|CAQ44245.1| putative permease component of ABC transporter protein
           [Stenotrophomonas maltophilia K279a]
          Length = 373

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 113/364 (31%), Positives = 193/364 (53%), Gaps = 13/364 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           + R +G W     +  A +V+  +  ++      +D + I ++D+ G   ++    +   
Sbjct: 21  LIRLSGTWTLKT-ALAAAEVLRGVPDTLTG----IDATGIEKMDSAGVLQVLRVAHRADL 75

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
                      +   +L+           +P+R F           +G  +    ++  +
Sbjct: 76  GEDALQFRPDHQ---ALVCTIEEVADDRPRPKRDF---GVLAALERLGVSVHATGHNIKA 129

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               LG  +           +F+  L + + QM  VG+  VP+V L+S++ GAVIA  G+
Sbjct: 130 LCSFLGENLVKAARLVKEPRRFR--LTATVHQMEQVGLDAVPLVALLSYLVGAVIAFLGS 187

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L  FGAEI+ ++L++I  LRE  VLLTA+++AGR+ SA  A+IG+MK  EEIDA+RT+
Sbjct: 188 TILRDFGAEIYVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKAREEIDAMRTL 247

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GLD + +L+ PR+ AL+++LPLLT +A  + + G   V     DIP  ++ +R H T  +
Sbjct: 248 GLDPIDLLVLPRLLALLVTLPLLTFIAMIAGLAGGITVGAFDLDIPPQMYIARMHETMEV 307

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            ++  GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VIIID+  A++
Sbjct: 308 RHMLVGLSKAPVFALVIGLIGCLEGLKVEGTAQSVGERTTSSVVQTISLVIIIDAFAALW 367

Query: 368 YFAI 371
           +  +
Sbjct: 368 FMHM 371


>gi|53718041|ref|YP_107027.1| hypothetical protein BPSL0401 [Burkholderia pseudomallei K96243]
 gi|76809874|ref|YP_332026.1| ABC transporter permease [Burkholderia pseudomallei 1710b]
 gi|126441439|ref|YP_001057484.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 668]
 gi|126452246|ref|YP_001064733.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 1106a]
 gi|134279780|ref|ZP_01766492.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 305]
 gi|167736870|ref|ZP_02409644.1| ABC transporter, permease protein [Burkholderia pseudomallei 14]
 gi|167813976|ref|ZP_02445656.1| ABC transporter, permease protein [Burkholderia pseudomallei 91]
 gi|167822497|ref|ZP_02453968.1| ABC transporter, permease protein [Burkholderia pseudomallei 9]
 gi|167844078|ref|ZP_02469586.1| ABC transporter, permease protein [Burkholderia pseudomallei B7210]
 gi|167892582|ref|ZP_02479984.1| ABC transporter, permease protein [Burkholderia pseudomallei 7894]
 gi|167901079|ref|ZP_02488284.1| ABC transporter, permease protein [Burkholderia pseudomallei NCTC
           13177]
 gi|167909299|ref|ZP_02496390.1| ABC transporter, permease protein [Burkholderia pseudomallei 112]
 gi|167917331|ref|ZP_02504422.1| ABC transporter, permease protein [Burkholderia pseudomallei
           BCC215]
 gi|226193717|ref|ZP_03789320.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|237810635|ref|YP_002895086.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei MSHR346]
 gi|242316672|ref|ZP_04815688.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 1106b]
 gi|254181998|ref|ZP_04888595.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 1655]
 gi|254187927|ref|ZP_04894439.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254196514|ref|ZP_04902938.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei S13]
 gi|254260256|ref|ZP_04951310.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 1710a]
 gi|254295953|ref|ZP_04963410.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 406e]
 gi|52208455|emb|CAH34389.1| putative membrane protein [Burkholderia pseudomallei K96243]
 gi|76579327|gb|ABA48802.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710b]
 gi|126220932|gb|ABN84438.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 668]
 gi|126225888|gb|ABN89428.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 1106a]
 gi|134248980|gb|EBA49062.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 305]
 gi|157805700|gb|EDO82870.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 406e]
 gi|157935607|gb|EDO91277.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|169653257|gb|EDS85950.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei S13]
 gi|184212536|gb|EDU09579.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 1655]
 gi|225934295|gb|EEH30279.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|237504399|gb|ACQ96717.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei MSHR346]
 gi|242139911|gb|EES26313.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 1106b]
 gi|254218945|gb|EET08329.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 1710a]
          Length = 374

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 101/372 (27%), Positives = 176/372 (47%), Gaps = 12/372 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
              G TV R  G W +  ++    +V   I +  +      DLS +  +D +G + +   
Sbjct: 14  GSQGRTV-RLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALW-- 70

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
             +  G+    G++    Q   +     R     + P+     +         G+ +  F
Sbjct: 71  --RVWGRRLPDGIALTDNQRV-VFERIERLDAGRESPEPVVRIDPVTRF----GQGLFTF 123

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                    +LG +I +                 +   +Y  G   +P+  L++F+ G V
Sbjct: 124 GEHLYGGIALLGGLIVDLLAVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIV 181

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           ++   A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+
Sbjct: 182 LSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEEL 241

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+R MG+     +  PR+ AL +++PLL +  N  A+ G ++       I    F    
Sbjct: 242 DAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSL 301

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            S   +AN+F GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D
Sbjct: 302 PSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILAD 361

Query: 362 SLFAIFYFAIGI 373
           ++FAI +  +G+
Sbjct: 362 AVFAILFQNVGL 373


>gi|118497851|ref|YP_898901.1| ABC transporter membrane protein [Francisella tularensis subsp.
           novicida U112]
 gi|194323824|ref|ZP_03057600.1| conserved hypothetical protein [Francisella tularensis subsp.
           novicida FTE]
 gi|254373206|ref|ZP_04988695.1| ABC superfamily ATP binding cassette transporter [Francisella
           tularensis subsp. novicida GA99-3549]
 gi|118423757|gb|ABK90147.1| ABC-type transport system permease protein [Francisella novicida
           U112]
 gi|151570933|gb|EDN36587.1| ABC superfamily ATP binding cassette transporter [Francisella
           novicida GA99-3549]
 gi|194322188|gb|EDX19670.1| conserved hypothetical protein [Francisella tularensis subsp.
           novicida FTE]
          Length = 366

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 106/356 (29%), Positives = 178/356 (50%), Gaps = 6/356 (1%)

Query: 17  SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK-LQGVS 75
              + +I   +V       +     +D++ I  +DT GA  I+  ++      + L   +
Sbjct: 15  LLTLKQINPKLVEKKVSRSKVKLNRIDITKIQALDTAGAYFILKVLKDLELTKEDLVFDN 74

Query: 76  THIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLV 135
              + L  L++     K+  +   +S   N      Y +GK     + +  +    LG +
Sbjct: 75  HKDKNLIELVANNFPTKVDKENSHKS---NIVFTSIYTLGKNTNNLLQEVKASIGFLGAI 131

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +            ++ F   ++   Y   +  + +V+L+S + G V+       + Q+G 
Sbjct: 132 LLGYLTLIRKP--YRSFFSIVLNIAYDSTIKALSIVMLLSLIIGLVLTYLPLNLMMQYGT 189

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
           +IF +D++ I   RE   L TA++IAGRSGSA  +EIG MK+NEEIDA++T+G D ++ L
Sbjct: 190 QIFVVDMLGISSFREFAPLFTAIIIAGRSGSAFTSEIGIMKVNEEIDALQTIGEDPIQRL 249

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PRI ALIISLP+LT++A  + IIG  I+      I    F  R  S   + + + GL+
Sbjct: 250 VLPRITALIISLPVLTVIAMIANIIGGIIIADVIAGITPLQFIERLFSNVNVNHFYIGLL 309

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           K PF A  I  +   +G AV   S S+GK  TT VV SI ++I++D++FA+    +
Sbjct: 310 KTPFFALVIAGIGCHQGLAVRRDSQSVGKATTTSVVYSIFLIIVVDAIFAVALNGV 365


>gi|167627644|ref|YP_001678144.1| ABC-type transport system permease [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167597645|gb|ABZ87643.1| ABC-type transport system permease protein [Francisella
           philomiragia subsp. philomiragia ATCC 25017]
          Length = 365

 Score =  265 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 106/350 (30%), Positives = 177/350 (50%), Gaps = 4/350 (1%)

Query: 17  SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVST 76
              + +I   ++       + D    DL+ +T +DT GA +I+   +     +  + +  
Sbjct: 15  ILTLKQIDSKLIDKKISRSKDDIKQFDLTKVTLLDTAGAYIIIKTAKNLS--LSKENIIF 72

Query: 77  HIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVI 136
             E+  +L+    +      + + S   N   N  Y +GK     +++  +    LG + 
Sbjct: 73  ANEKDKNLVDIVFKNFPSTAEEELSSKSNVVFNSIYTLGKNTNNLLSEIKTSISFLGAIF 132

Query: 137 SNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE 196
                       +K F   ++   Y   +  + +VIL+S + G V+       L Q+G +
Sbjct: 133 LGYITLIRRP--YKAFFSIVLNICYDSTIRALSIVILLSLIIGLVLTYLPLNLLMQYGTQ 190

Query: 197 IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILI 256
           IF +D++ I   RE   L TA++IAGRSGSA  +EIG MK+NEEIDA++T+G D ++ L+
Sbjct: 191 IFVVDMLGISSFREFAPLFTAIIIAGRSGSAFTSEIGIMKVNEEIDALQTIGEDPMQRLV 250

Query: 257 SPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316
            PRI AL+ISLP+LT++A  + I G  I+      I    F  R  S   + + + GL+K
Sbjct: 251 LPRITALVISLPVLTVIAMIANIAGGIIIADLIAGITPLQFIERLFSNVNVNHFYIGLLK 310

Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
            PF A  I  +   +G +V   S S+GK  TT VV SI ++I++D++FA+
Sbjct: 311 TPFFALVIAGIGCHQGLSVKRDSQSVGKATTTSVVYSIFLIILVDAIFAV 360


>gi|254176752|ref|ZP_04883409.1| putative ABC transporter, permease protein [Burkholderia mallei
           ATCC 10399]
 gi|254202028|ref|ZP_04908392.1| putative ABC transporter, permease protein [Burkholderia mallei
           FMH]
 gi|254207359|ref|ZP_04913710.1| putative ABC transporter, permease protein [Burkholderia mallei
           JHU]
 gi|147747922|gb|EDK54998.1| putative ABC transporter, permease protein [Burkholderia mallei
           FMH]
 gi|147752901|gb|EDK59967.1| putative ABC transporter, permease protein [Burkholderia mallei
           JHU]
 gi|160697793|gb|EDP87763.1| putative ABC transporter, permease protein [Burkholderia mallei
           ATCC 10399]
          Length = 374

 Score =  265 bits (679), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 101/372 (27%), Positives = 176/372 (47%), Gaps = 12/372 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
              G TV R  G W +  ++    +V   I +  +      DLS +  +D +G + +   
Sbjct: 14  GSQGRTV-RLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALW-- 70

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
             +  G+    G++    Q   +     R     + P+     +         G+ +  F
Sbjct: 71  --RVWGRRLPDGIALTDNQRV-VFKRIERLDAGRESPEPVVRIDPVTRF----GQGLFTF 123

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                    +LG +I +                 +   +Y  G   +P+  L++F+ G V
Sbjct: 124 GEHLYGGIALLGGLIVDLLAVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIV 181

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           ++   A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+
Sbjct: 182 LSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEEL 241

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+R MG+     +  PR+ AL +++PLL +  N  A+ G ++       I    F    
Sbjct: 242 DAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSL 301

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            S   +AN+F GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D
Sbjct: 302 PSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILAD 361

Query: 362 SLFAIFYFAIGI 373
           ++FAI +  +G+
Sbjct: 362 AVFAILFQNVGL 373


>gi|332184385|gb|AEE26639.1| ABC-type transport system permease protein [Francisella cf.
           novicida 3523]
          Length = 366

 Score =  265 bits (679), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 113/365 (30%), Positives = 181/365 (49%), Gaps = 9/365 (2%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              FAG      + +I   +V       +     +D++ I  +DT GA  I+  ++    
Sbjct: 9   TIYFAG---LLTLKQINPKLVEKKISRTKVKLKQIDITKIQSLDTAGAYFILRVLKDLGL 65

Query: 68  -KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
            K  L   S   + L  L++     KI  +   +S   N      Y +GK     + +  
Sbjct: 66  TKKDLILNSDKDKNLIELVANNFPTKIDKEYSHKS---NIVFTSIYTLGKNTNNLLQEIK 122

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +    LG ++            +K F   ++   Y   +  + +V+L+S + G V+    
Sbjct: 123 ASIGFLGAILLGYLTLIRKP--YKSFFSIVLNIAYDSTIKALSIVMLLSLIIGLVLTYLP 180

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
              + Q+G +IF +D++ I   RE   L TA++IAGRSGSA  +EIG MK+NEEIDA++T
Sbjct: 181 LNLMMQYGTQIFVVDMLGISSFREFAPLFTAIIIAGRSGSAFTSEIGIMKVNEEIDALQT 240

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +G D ++ L+ PRI ALIISLP+LT++A  + IIG  I+      I    F  R  S   
Sbjct: 241 IGEDPIQRLVLPRITALIISLPVLTVIAMIANIIGGIIIADIIAGITPLQFIERLFSNVN 300

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           + + + GL+K PF A  I  +   +G AV   S S+GK  TT VV SI ++I++D++FA+
Sbjct: 301 VNHFYIGLLKTPFFALVIAGIGCHQGLAVRRDSQSVGKATTTSVVYSIFLIIVVDAIFAV 360

Query: 367 FYFAI 371
               +
Sbjct: 361 ALNGV 365


>gi|208779915|ref|ZP_03247259.1| conserved hypothetical protein [Francisella novicida FTG]
 gi|254374661|ref|ZP_04990142.1| hypothetical protein FTDG_00836 [Francisella novicida GA99-3548]
 gi|151572380|gb|EDN38034.1| hypothetical protein FTDG_00836 [Francisella novicida GA99-3548]
 gi|208744370|gb|EDZ90670.1| conserved hypothetical protein [Francisella novicida FTG]
          Length = 366

 Score =  265 bits (679), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 105/356 (29%), Positives = 178/356 (50%), Gaps = 6/356 (1%)

Query: 17  SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK-LQGVS 75
              + +I   +V       +     +D++ I  +DT GA  I+  ++      + L   +
Sbjct: 15  LLTLKQINPKLVEKKVSRSKVKLNRIDITKIQALDTAGAYFILKVLKDLELTKEDLVFDN 74

Query: 76  THIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLV 135
              + L  L++     ++  +   +S   N      Y +GK     + +  +    LG +
Sbjct: 75  HKDKNLIELVANNFPTRVDKENSHKS---NIVFTSIYTLGKNTNNLLQEVKASIGFLGAI 131

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +            ++ F   ++   Y   +  + +V+L+S + G V+       + Q+G 
Sbjct: 132 LLGYLTLIRKP--YRSFFSIVLNIAYDSTIKALSIVMLLSLIIGLVLTYLPLNLMMQYGT 189

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
           +IF +D++ I   RE   L TA++IAGRSGSA  +EIG MK+NEEIDA++T+G D ++ L
Sbjct: 190 QIFVVDMLGISSFREFAPLFTAIIIAGRSGSAFTSEIGIMKVNEEIDALQTIGEDPIQRL 249

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PRI ALIISLP+LT++A  + IIG  I+      I    F  R  S   + + + GL+
Sbjct: 250 VLPRITALIISLPVLTVIAMIANIIGGIIIADVIAGITPLQFIERLFSNVNVNHFYIGLL 309

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           K PF A  I  +   +G AV   S S+GK  TT VV SI ++I++D++FA+    +
Sbjct: 310 KTPFFALVIAGIGCHQGLAVRRDSQSVGKATTTSVVYSIFLIIVVDAIFAVALNGV 365


>gi|254417869|ref|ZP_05031593.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
 gi|196184046|gb|EDX79022.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
          Length = 372

 Score =  265 bits (679), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 102/373 (27%), Positives = 190/373 (50%), Gaps = 16/373 (4%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G    R  G+W +  +  +   +   ++         VD   +   DT GA  ++   +
Sbjct: 13  DGTAKLRLVGDWTTTALGRLPQRLGKDLD---GRKIESVDTRDLGRFDTAGALALV---Q 66

Query: 64  KYHGKIKLQGVSTHIE--QLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
             H  +     +   E  +++++I    RK     K        +F +    IG+ +  F
Sbjct: 67  ASHCGVPKSAWTERPEAGRIYTMIEALERKSSPPPK-----QPGAFTSAFAKIGRGVYDF 121

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             ++      LG ++    E   +    +    + + Q    G+  +P+V++ +F  GAV
Sbjct: 122 GAEAMLSLAFLGRLMEAVVEAAKNPGGIR--WPAWVSQAERAGLDAIPIVMVTNFFIGAV 179

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A  G   L+ FGA++F++ L+ +   RE  V++ +V++AGRS SA  AEIGSM++N+E+
Sbjct: 180 VAFIGVDLLTDFGAQVFAVQLIGVAMFREFAVVIASVLLAGRSASAFAAEIGSMRMNQEV 239

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA++ MG++  + L+ PR+ AL++ LPLLT +     ++G  IV W   ++  A FF R 
Sbjct: 240 DAMQVMGVNPFQALVVPRLAALVLMLPLLTFMGMIGGLLGGLIVCWSSLNLGPAFFFQRL 299

Query: 302 HSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
               ++  ++  GL+KAP  A  I  +  ++G +V     SLG++VT  VVQ+I  +I++
Sbjct: 300 VEDGSMAQHMMVGLVKAPVFALVIAAIGCRQGMSVAGDVESLGRRVTAAVVQAIFAIILL 359

Query: 361 DSLFAIFYFAIGI 373
           D++FA+ +  + I
Sbjct: 360 DAVFALMFLELDI 372


>gi|308272474|emb|CBX29078.1| hypothetical protein N47_J00590 [uncultured Desulfobacterium sp.]
          Length = 381

 Score =  265 bits (679), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 107/365 (29%), Positives = 180/365 (49%), Gaps = 6/365 (1%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            + G     F G   +     I   ++  ++ S+   S   DL  ++  D  G  +++  
Sbjct: 17  DKEGFFTIHFHGEMDAQSSPGIIGKLLGEVD-SLSLLSITADLDDVSYFDDFGLLVLIEL 75

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
            +    K     V+ +  +  +++        ++  P +    N  +     +G+ ++  
Sbjct: 76  QKAAKNKNSSFNVTDNSGKAKNILYLLESNFERSVLPAKQ---NRLQLKITQLGESVLDN 132

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           I++S      +G V  +  + C      +  +   I  M   GV+ +P++ LISF+ G V
Sbjct: 133 ISNSRVFVSFIGSVALSFYQICRHPKSLR--INDTILHMEKTGVNALPIIALISFLLGLV 190

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IA   + QL QFGA ++   L+SI  + E+G ++TA++IAGRSGSA  AEIG+MKI+EE 
Sbjct: 191 IAFMSSLQLEQFGANLYVASLVSIGMVSELGPIMTAIVIAGRSGSAFAAEIGTMKISEET 250

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  MG D    L  PRI A II +PLLT+ A+  AI G  +V     D+  + + ++ 
Sbjct: 251 DALFVMGFDPTLFLAVPRILASIIVVPLLTLFADIFAIAGGLVVGVFILDLTTSSYLTQT 310

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            +   L  I  G+ K+   A  I  V    GF     ++++G   T+ VV SI ++I+ID
Sbjct: 311 MNVLNLFEICWGISKSIVFAVIISWVGCLRGFQTKGGADAVGNAATSAVVSSIFLIILID 370

Query: 362 SLFAI 366
           S+FAI
Sbjct: 371 SMFAI 375


>gi|139001578|dbj|BAF51698.1| putative innermembrane component of ABC transporter system
           [Sphingobium japonicum]
          Length = 316

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 103/323 (31%), Positives = 175/323 (54%), Gaps = 9/323 (2%)

Query: 50  IDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
           +DTIGA ++   +++      + G     E+L + +              R      ++ 
Sbjct: 1   MDTIGAWVLHRAIKRL--DCGITGDKCDAERLIATVGSVDEPVNI-----RPDHEPPWQR 53

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ +V             G  +  T        +F+  + +++++   VGVS + 
Sbjct: 54  VVGQIGEAVVNSGTTLLGLLGFFGGTLVATWNVIRHPGRFR--INAVVQRFEVVGVSALG 111

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ L+SF+ G VIAQQG+ QL QFG E+ +I+L+  L  RE+GVL+TA+M+AGRSGSA  
Sbjct: 112 IIGLMSFLIGIVIAQQGSVQLRQFGMEMLTINLVGRLTFRELGVLMTAIMVAGRSGSAFA 171

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A++G+MK+ EE+DA+RT+G+  +  L+ PR  A+++ +PLL   ++  AIIG   +    
Sbjct: 172 AQLGTMKLTEEVDAMRTIGVSPMEALVLPRTLAVVVMMPLLGFYSSIVAIIGGGFLCAVS 231

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            DIP   F  R      + +++ GLIKAP     I +    +G  V  ++  +G + T  
Sbjct: 232 LDIPPITFVQRLREVVPIHDLWVGLIKAPVFGVIIALAGCFQGMQVKANAEEVGLRTTAA 291

Query: 350 VVQSISIVIIIDSLFAIFYFAIG 372
           VVQ+I +VI+ID+ FA+F+  +G
Sbjct: 292 VVQAIFLVIVIDAFFAVFFTWVG 314


>gi|225165545|ref|ZP_03727365.1| protein of unknown function DUF140 [Opitutaceae bacterium TAV2]
 gi|224800218|gb|EEG18628.1| protein of unknown function DUF140 [Opitutaceae bacterium TAV2]
          Length = 371

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 92/364 (25%), Positives = 172/364 (47%), Gaps = 19/364 (5%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLS-AITEIDTIGAEL--- 57
            +  +   R  G W+           +  +    +     ++L+  +  +D+        
Sbjct: 23  EDGDLLRIRLGGRWRVTA----PRPSLAGVIGDRKPRRIRIELAPNLERLDSALLLFTHE 78

Query: 58  IMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
           I  + E++        +S  +  L + ++   + +  + +           NL   IG+ 
Sbjct: 79  IRSWCEQHKTDYDTSALSPEVAALCNKLATATQAEPAHDR---------RTNLLTSIGEA 129

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
            ++ ++ +      LG  + +         KF+        +M   G   +P+V LISF+
Sbjct: 130 TIETVDRATGIMSFLGECLLSFFHLARRPRKFR--WGDCSEEMQQCGAMALPIVGLISFL 187

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G ++A Q A  + QFGA+I+  D ++++  RE+G ++T +++AGR+G+A  A IG+MK 
Sbjct: 188 VGVIMAYQSAVLMRQFGADIYVADAVALVMAREMGAMMTGIILAGRTGAAFAATIGNMKA 247

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
           NEEIDA+ T G+  V  L+ PR+ AL + +PLLT+ AN   I+G   V     DIP   +
Sbjct: 248 NEEIDALSTFGIRPVDFLVLPRLVALALMMPLLTLYANALGIVGGMGVAMGVLDIPPITY 307

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
           +++  +   L++I TGLIKA      +G+     G      ++ +G+  T+ VV  + ++
Sbjct: 308 WNQTVNALDLSDISTGLIKASCFGILVGLSGCHRGMNADRSASGVGRAATSAVVIGMLLI 367

Query: 358 IIID 361
           II D
Sbjct: 368 IIAD 371


>gi|319761111|ref|YP_004125048.1| hypothetical protein Alide_0383 [Alicycliphilus denitrificans BC]
 gi|317115672|gb|ADU98160.1| protein of unknown function DUF140 [Alicycliphilus denitrificans
           BC]
          Length = 388

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 83/372 (22%), Positives = 170/372 (45%), Gaps = 13/372 (3%)

Query: 3   ENGITVFR--FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           ++G    R    G+W +   ++      +A             L  +  +D +GA+++  
Sbjct: 27  QDGTATPRALPQGDWVAAAFADRRAWRRLAAQLKACGPGHAWSLQGLARLDHVGAQVLWN 86

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
              +         +S    ++   ++                      +    +G  +++
Sbjct: 87  HWGRAWPA--QVDLSAAQREMLERVARFSTPCAPAPP-------WRLADQIDRLGVLVLR 137

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
            +        ++G ++ +      +    +     +   +Y +G   + +  L+ F+ G 
Sbjct: 138 ALGHLADMVELVGQLLLDLLRLVRNPA--RAPWRDISGHVYQMGAKALHITALVGFLIGV 195

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A   + QL QFGAE F ++++ I  +RE+G +L A+++AGRSGSAI A+IG M++ EE
Sbjct: 196 VLAYLMSLQLRQFGAEAFIVNILGISLIRELGPMLGAILVAGRSGSAITAQIGVMRVTEE 255

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +DA+R MG+     L+ PR  AL +++PL+ +    +A+ G  +       I  A F   
Sbjct: 256 LDAMRVMGIAHGFRLVMPRALALGLAMPLIALWTTLAALAGGMLAADLTMGISSAYFLQA 315

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             +   ++N++  + K+      I ++    G  V  ++ SLG+  T  VV +I++VI++
Sbjct: 316 LPAAVKVSNLWLAMAKSVVFGVFIALIGCHWGLRVKPNTQSLGEGTTASVVSAITMVIVV 375

Query: 361 DSLFAIFYFAIG 372
           D+LFA+ +  +G
Sbjct: 376 DALFAVAFKNLG 387


>gi|217419400|ref|ZP_03450906.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 576]
 gi|217396704|gb|EEC36720.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 576]
          Length = 366

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 101/372 (27%), Positives = 176/372 (47%), Gaps = 12/372 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
              G TV R  G W +  ++    +V   I +  +      DLS +  +D +G + +   
Sbjct: 6   GSQGRTV-RLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALW-- 62

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
             +  G+    G++    Q   +     R     + P+     +         G+ +  F
Sbjct: 63  --RVWGRRLPDGIALTDNQRV-VFERIERLDAGRESPEPVVRIDPVTRF----GQGLFTF 115

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                    +LG +I +                 +   +Y  G   +P+  L++F+ G V
Sbjct: 116 GEHLYGGIALLGGLIVDLLAVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIV 173

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           ++   A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+
Sbjct: 174 LSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEEL 233

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+R MG+     +  PR+ AL +++PLL +  N  A+ G ++       I    F    
Sbjct: 234 DAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSL 293

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            S   +AN+F GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D
Sbjct: 294 PSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILAD 353

Query: 362 SLFAIFYFAIGI 373
           ++FAI +  +G+
Sbjct: 354 AVFAILFQNVGL 365


>gi|317401487|gb|EFV82119.1| integral membrane protein [Achromobacter xylosoxidans C54]
          Length = 377

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 98/368 (26%), Positives = 185/368 (50%), Gaps = 13/368 (3%)

Query: 8   VFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-FMEKY 65
           V    G+W    ++E  + +   A         A  DL  I+ +DTIGA LI   + EK 
Sbjct: 21  VCHVGGDWSVLALAEPGEVERRRAAMAKATDAGARWDLQGISRLDTIGALLIWQAWGEKL 80

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
             +++    S   + +F+ ++     K    +P+ ++ +         +G  +++   + 
Sbjct: 81  PERVRW---SAGQQDVFTALATNKGGKQALPRPEPAWGW------LRALGGAVLQAGENG 131

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            +   +LG ++ +     +     +G    +  Q+Y  G   + +  L+ F+ G V++  
Sbjct: 132 RALLTMLGQLVLDLFGMLSRPS--RGPWREISAQVYRTGAQALGITALVGFLIGVVLSYL 189

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            A QL   GA+ F + L+ +  +RE+G +L A+++AGRSGSAI A+IG M++ +E+DA+ 
Sbjct: 190 SAQQLQMIGADRFIVRLLGVSIVRELGPVLAAILVAGRSGSAITAQIGVMRVTQELDAML 249

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MG+   + LI PR+ AL +++PLL +  +  AI+G  +       +    F        
Sbjct: 250 VMGISHGQRLILPRVVALAVTMPLLVLWTDAMAILGGMLAAQVQLGVSAQWFLQSLPDAI 309

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           +L N + G++K       I ++A   G  +  ++ SLG+  TT VV SI+ VI++D+L+A
Sbjct: 310 SLTNYWIGILKGVTFGILIALIACHFGLRIQPNTESLGRGTTTSVVTSITGVILLDALYA 369

Query: 366 IFYFAIGI 373
           + + ++GI
Sbjct: 370 VIFSSVGI 377


>gi|56708309|ref|YP_170205.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110670780|ref|YP_667337.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis FSC198]
 gi|134301737|ref|YP_001121705.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|187931809|ref|YP_001891794.1| ABC-type transport system permease protein [Francisella tularensis
           subsp. mediasiatica FSC147]
 gi|224457429|ref|ZP_03665902.1| ABC-type transport system permease protein [Francisella tularensis
           subsp. tularensis MA00-2987]
 gi|254370792|ref|ZP_04986797.1| ABC superfamily ATP binding cassette transporter [Francisella
           tularensis subsp. tularensis FSC033]
 gi|254875129|ref|ZP_05247839.1| ABC transporter [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|56604801|emb|CAG45880.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110321113|emb|CAL09263.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis FSC198]
 gi|134049514|gb|ABO46585.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|151569035|gb|EDN34689.1| ABC superfamily ATP binding cassette transporter [Francisella
           tularensis subsp. tularensis FSC033]
 gi|187712718|gb|ACD31015.1| ABC-type transport system permease protein [Francisella tularensis
           subsp. mediasiatica FSC147]
 gi|254841128|gb|EET19564.1| ABC transporter [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282159540|gb|ADA78931.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 366

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 103/356 (28%), Positives = 176/356 (49%), Gaps = 6/356 (1%)

Query: 17  SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK-LQGVS 75
              + +I   +V       +     +D++ I  +DT GA  I+  ++      + L   +
Sbjct: 15  LLTLKQINPKLVEKKVSRSKVKLNRIDITKIQALDTAGAYFILKVLKDLELTKEDLVFDN 74

Query: 76  THIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLV 135
              + L  L++     ++  +   +S   N      Y +GK     + +  +    LG +
Sbjct: 75  HKDKNLIELVANNFPTRVDKENSHKS---NIVFTSIYTLGKNTNNLLQEIKASIGFLGAI 131

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +            ++ F   ++   Y   +  + +V+L+S + G V+       + Q+G 
Sbjct: 132 LLGYLTLIRKP--YRSFFSIVLNIAYDSTIKALSIVMLLSLIIGLVLTYLPLNLMMQYGT 189

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
           +IF +D++ I   RE   L TA++IAGRS SA  +EIG MK+NEEIDA++T+G D ++ L
Sbjct: 190 QIFVVDMLGISSFREFAPLFTAIIIAGRSSSAFTSEIGIMKVNEEIDALQTIGEDPIQRL 249

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PRI ALIISLP+LT++A  + II   I+      I    F  R  S   + + + GL+
Sbjct: 250 VLPRITALIISLPVLTVIAMIANIISGIIIADVIAGITPLQFIERLFSNVNVNHFYIGLL 309

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           K PF A  I  +   +G AV   S S+GK  TT VV SI ++I++D++FA+    +
Sbjct: 310 KTPFFALVIAGIGCHQGLAVRRDSQSVGKATTTSVVYSIFLIIVVDAIFAVALNGV 365


>gi|67642420|ref|ZP_00441177.1| putative ABC transporter, permease protein [Burkholderia mallei GB8
           horse 4]
 gi|121598966|ref|YP_991583.1| putative ABC transporter, permease protein [Burkholderia mallei
           SAVP1]
 gi|126450485|ref|YP_001082718.1| putative ABC transporter, permease protein [Burkholderia mallei
           NCTC 10247]
 gi|251768288|ref|ZP_02270158.2| putative ABC transporter, permease protein [Burkholderia mallei
           PRL-20]
 gi|254357616|ref|ZP_04973890.1| putative ABC transporter, permease protein [Burkholderia mallei
           2002721280]
 gi|121227776|gb|ABM50294.1| putative ABC transporter, permease protein [Burkholderia mallei
           SAVP1]
 gi|126243355|gb|ABO06448.1| putative ABC transporter, permease protein [Burkholderia mallei
           NCTC 10247]
 gi|148026680|gb|EDK84765.1| putative ABC transporter, permease protein [Burkholderia mallei
           2002721280]
 gi|238523569|gb|EEP87007.1| putative ABC transporter, permease protein [Burkholderia mallei GB8
           horse 4]
 gi|243060282|gb|EES42468.1| putative ABC transporter, permease protein [Burkholderia mallei
           PRL-20]
          Length = 366

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 101/372 (27%), Positives = 176/372 (47%), Gaps = 12/372 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
              G TV R  G W +  ++    +V   I +  +      DLS +  +D +G + +   
Sbjct: 6   GSQGRTV-RLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALW-- 62

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
             +  G+    G++    Q   +     R     + P+     +         G+ +  F
Sbjct: 63  --RVWGRRLPDGIALTDNQRV-VFKRIERLDAGRESPEPVVRIDPVTRF----GQGLFTF 115

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                    +LG +I +                 +   +Y  G   +P+  L++F+ G V
Sbjct: 116 GEHLYGGIALLGGLIVDLLAVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIV 173

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           ++   A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+
Sbjct: 174 LSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEEL 233

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+R MG+     +  PR+ AL +++PLL +  N  A+ G ++       I    F    
Sbjct: 234 DAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSL 293

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            S   +AN+F GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D
Sbjct: 294 PSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILAD 353

Query: 362 SLFAIFYFAIGI 373
           ++FAI +  +G+
Sbjct: 354 AVFAILFQNVGL 365


>gi|294054794|ref|YP_003548452.1| protein of unknown function DUF140 [Coraliomargarita akajimensis
           DSM 45221]
 gi|293614127|gb|ADE54282.1| protein of unknown function DUF140 [Coraliomargarita akajimensis
           DSM 45221]
          Length = 366

 Score =  263 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 98/374 (26%), Positives = 183/374 (48%), Gaps = 9/374 (2%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIM 59
           M  +     R  G+W        + ++  A++    S+ AI  D   + E DT     ++
Sbjct: 1   MDSSQGLCVRIYGDWLLGNTRPGSQELESALSVVTTSEQAIRFDAGDLGEWDTG----LL 56

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
            F+ + +   + +G+      L           +   +P ++       +    +G++ +
Sbjct: 57  IFIRRCYDLAQERGLEVDFSGLPEGAQNMMALSLAVPEPAKADGRK--VSWLSRVGERSL 114

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                  S     G  + +   F     + +     L+ Q    GV  +P+V+L++ +TG
Sbjct: 115 AVGGGVRSYCDFFGQFLLDLLAFVTGRGQVRRRDFFLLCQ--ETGVQALPIVMLLNCLTG 172

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            +IA  G  QL +F A+IF  DL+ +   RE+G ++T V++AGR+G+A  A+IGSM++NE
Sbjct: 173 LIIAFIGVIQLQKFAADIFVADLVGLATARELGAVITGVIMAGRTGAAFAAQIGSMQVNE 232

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DA+ T G+  ++ L+ PR+ AL++ +PLL ++A+   I+G  I+     D+    +F+
Sbjct: 233 EVDALTTFGISPMQFLVVPRVVALVLMMPLLGVVADIVGILGGLIIAVSISDVSVIQYFN 292

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           + H    L + F G+ K       IGI     G   G  ++S+G   T+ VV SI+ +++
Sbjct: 293 QVHQAVGLNDFFIGIFKCAVFGLIIGIAGCYRGLNCGRDASSVGLATTSAVVTSITWLVV 352

Query: 360 IDSLFAIFYFAIGI 373
            D++FA+    +GI
Sbjct: 353 ADAIFAVLCHLLGI 366


>gi|32266623|ref|NP_860655.1| hypothetical protein HH1124 [Helicobacter hepaticus ATCC 51449]
 gi|32262674|gb|AAP77721.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
          Length = 348

 Score =  263 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 95/350 (27%), Positives = 166/350 (47%), Gaps = 4/350 (1%)

Query: 24  ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFS 83
                      I      +D   +++ D +    I   +       ++ G +T   ++F 
Sbjct: 3   KKQREALSEAIISQHKLTIDFKRVSKADFVFCAFIYGLI--VDKDTQIIGTNTRTNEIFQ 60

Query: 84  LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFC 143
            +S +  K+ +      +F       +   +GK+I +F     +  +  G+ +       
Sbjct: 61  TLSSSLPKENEENAINNAFSLKISHMVLIPLGKRIEQFFESFLNFLNFCGMCLWYFFLSL 120

Query: 144 ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203
            S  +FK    S+   M   G   +PV +L +F+    IA QG  QL + G  + S++++
Sbjct: 121 LSPRRFK--CGSIFYHMNEAGFKALPVALLTAFIVSYAIALQGVLQLEKMGVPLMSVEIV 178

Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263
           + L LRE+G  + A++IAGRS SA  A++G M + EE DA++TM L     LI PR+ AL
Sbjct: 179 AKLSLRELGPFILAIVIAGRSSSAFSAQLGVMNLTEENDALKTMNLSLFDYLILPRVLAL 238

Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323
           II +PLL  LA+  ++  A + +     I F  +  RF+    + +   G+IKAPF   A
Sbjct: 239 IIVMPLLVFLADSVSLFAAMLAVKMQTGINFMQYLERFYEYVGINHFLVGMIKAPFFGAA 298

Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           I +V    G  V   + S+G + T  VV ++  VI+I+++F++    + I
Sbjct: 299 IALVGCFRGLYVKGDTESIGLETTKSVVNALFWVILINAIFSVITTRLDI 348


>gi|189426230|ref|YP_001953407.1| hypothetical protein Glov_3181 [Geobacter lovleyi SZ]
 gi|189422489|gb|ACD96887.1| protein of unknown function DUF140 [Geobacter lovleyi SZ]
          Length = 261

 Score =  263 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 68/265 (25%), Positives = 134/265 (50%), Gaps = 7/265 (2%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
               N    IG++ +  + +  +    L   +           +     + +++Q+ ++G
Sbjct: 4   RQMTNFLRAIGRRTIAQVQELGNCGQFL---VYALYSILRRPGRP----VHILKQVSFIG 56

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
              + V++L +  TG V+  QG + L++FG+E      +++  +RE+G +L+A+M+ GR+
Sbjct: 57  AKSLFVIVLTAAFTGMVLGLQGYYTLTKFGSEGMLGTAVALSLIRELGPVLSALMVTGRA 116

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           GSAI AEIG M+I+E+IDA+ TM LD  + LISP+  A +IS+PLL  + +   I G  +
Sbjct: 117 GSAITAEIGIMRISEQIDALETMALDPYKYLISPKFIAAMISMPLLCAIFDVVGIYGGWM 176

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
           V  K   +    +FS  + +    ++++G +K+      I  +   +G+  G  +  + +
Sbjct: 177 VGVKLLGVNPGAYFSEMYKSVEWKDVYSGFVKSYSFGIIIAWIGCYKGYYAGHGAEGVSR 236

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYF 369
             T  VV +  ++++ D        
Sbjct: 237 ATTESVVLTSVLILVWDYFLTSILL 261


>gi|52842264|ref|YP_096063.1| ABC transporter, permease [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52629375|gb|AAU28116.1| ABC transporter, permease [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 374

 Score =  263 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 112/374 (29%), Positives = 191/374 (51%), Gaps = 13/374 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---M 59
           E     ++  G+W    +  +      + +    S    ++   I+  D+ GA  +   +
Sbjct: 11  EQKNATYQCCGSWSVLTLDGLPKKF--STSPLPDSQQITINGEKISAFDSAGALALKKCI 68

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
             ++K + +I+L   S   +Q+  LI  + +  +  Q P  S      + + Y IGK+  
Sbjct: 69  DELKKRNNQIELVNFSDSQQQMLELIE-SKQDILSYQLPAVSK-----EGVLYQIGKESE 122

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
             ++       ++G + +   E  A   +F   L S++  +   G+  +P++ L+SF+ G
Sbjct: 123 NKLHQVDGLIILIGDLSTRLFEAFAYWRRF--HLPSIVSVIDSAGLKALPIIGLLSFLIG 180

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A Q   QL  +GA IF   L  +   RE G L+TA+++AGR+ S+  A+IGSMKINE
Sbjct: 181 VVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMKINE 240

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DAI TMGL    +L+ P++  L+I  PLL   A+  +I GA I+     +I F  F S
Sbjct: 241 EVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFEDFLS 300

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           R   +  L  +  GL KAP  +  I +V   +GF V   ++S+G + T  VVQ++ ++II
Sbjct: 301 RLRDSVGLNQMMLGLYKAPAFSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFLIII 360

Query: 360 IDSLFAIFYFAIGI 373
            D+ F+I Y  +G+
Sbjct: 361 ADAAFSIAYSWMGL 374


>gi|114332197|ref|YP_748419.1| hypothetical protein Neut_2236 [Nitrosomonas eutropha C91]
 gi|114309211|gb|ABI60454.1| protein of unknown function DUF140 [Nitrosomonas eutropha C91]
          Length = 381

 Score =  263 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 85/372 (22%), Positives = 177/372 (47%), Gaps = 12/372 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +E G +  +  G++    ++     V   + +         DL+ I ++D  GA ++   
Sbjct: 18  TEAGNSCLQLTGSYTLVSLNPSLPAVARELAQLASQPGLYWDLTNIHQLDYAGAVMLWQI 77

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
             +      L  +    EQ+F  +       +     ++ F   S       +G+++++F
Sbjct: 78  WGEQRPDHLL--LRPEQEQMFQRLEKVV--SLPEPTQRKWFLPVSL------LGQQLLRF 127

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
            +       + G ++ +         +    +  +   +Y  G   + +  ++ F+ G V
Sbjct: 128 FDHLAGMISLSGQIVLDIVYLMTHPSRIP--VREISANLYRTGAQALGITAIVGFLIGIV 185

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           ++   + QL   GA+I+ ++++ +  +RE+G +L A+++AGRSGSA+ A++G M++ EE+
Sbjct: 186 LSYLSSEQLHMLGADIYIVNILGMSIIRELGPMLAAILVAGRSGSAMTAQLGVMRVTEEL 245

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  MG+     L+  +I  L ++LPL+ +  +  A++G  +       +      +  
Sbjct: 246 DALTVMGIPHSLRLVLSKIIGLSLALPLIVLWTSSVALLGGLLAADLQVGLSIRYAVTTL 305

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                +AN++ GL K      AI ++A   G  +  ++ SLG+  T  VV SI+ VIIID
Sbjct: 306 PDAVPIANLWLGLGKGVVCGMAIALIACHFGLRIKPNTESLGEGTTNSVVTSITAVIIID 365

Query: 362 SLFAIFYFAIGI 373
           ++FA+ + +IGI
Sbjct: 366 AIFAVAFSSIGI 377


>gi|237749352|ref|ZP_04579832.1| ABC transport system permease [Oxalobacter formigenes OXCC13]
 gi|229380714|gb|EEO30805.1| ABC transport system permease [Oxalobacter formigenes OXCC13]
          Length = 374

 Score =  263 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 90/367 (24%), Positives = 177/367 (48%), Gaps = 15/367 (4%)

Query: 9   FRFAGNWKSPEISEIA--DDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-FMEKY 65
               G W+   ++     + +   I+        + DL+ I E+D I A+ +   + EK 
Sbjct: 19  VVARGCWRVEVLASAGTINRLKSTIHSYSGKTGIVWDLTRIRELDYISAQFLWESWGEKR 78

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
              + L   +    + F+ +    + K+ +      + +  F+N+ + + +         
Sbjct: 79  PANLAL---TEEQGRFFARLEQAGQLKLPDTTKPFLWPWQRFRNIVHKVSE-------HF 128

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                ++G ++ +   F  +    +G    +   +Y+ G   + +  ++ F+ G V++  
Sbjct: 129 SGMVALVGQLMIDIVNFAKAPR--RGPWTEISANIYHAGAQALGITAVVGFLIGVVLSYL 186

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            A QL  FG ++F ++L+ I  LRE+G LL A+++AGRSGS++ A++G M++ EE+ A++
Sbjct: 187 SAQQLHMFGGDVFLVNLLGISVLRELGPLLAAILVAGRSGSSMTAQLGVMRVTEELSAMQ 246

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MGL     LI P++ AL I +PLL I  +  A++G  +       +  + F +      
Sbjct: 247 VMGLPQGFRLIMPKVIALSIVMPLLVIWTDVIALLGGMLAGSYEIGLSMSYFLASLPDAV 306

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            +AN + G+ K       I ++A   G  +  ++ SLG+  T  VV SI++VI+ D++FA
Sbjct: 307 PIANFWIGVGKGYVFGILIALIACYYGLKIKPNTESLGEGTTRSVVTSITVVILADAIFA 366

Query: 366 IFYFAIG 372
           I    +G
Sbjct: 367 IVLQGVG 373


>gi|154149262|ref|YP_001406165.1| ABC transport system permease [Campylobacter hominis ATCC BAA-381]
 gi|153805271|gb|ABS52278.1| ABC transport system permease [Campylobacter hominis ATCC BAA-381]
          Length = 367

 Score =  263 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 116/371 (31%), Positives = 180/371 (48%), Gaps = 12/371 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQ-SDSAIVDLSAITEIDTIGAELIMYFM 62
           NGI    F GN+      +IA +    +  SI+ S+  I++   +   D   A  I   +
Sbjct: 8   NGILNIFFNGNFDYKLNPKIAHNFKNIVKNSIKNSEKIILNFKDVENFDYFFAVFIKKSL 67

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            K +   ++   +  I+++F  +      +  ++K       N        IG   +   
Sbjct: 68  IKAN--YEIINENEKIKKIFKTLENADFSENIHKKN-----INFIIKTLNEIGIATIDAK 120

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
            +  +    +G        F  +  K +  L  +       G+  V +V L +F+ G V+
Sbjct: 121 KNLTNLTSFMGEFFIKF--FALTPKKMR--LKEMSNCAKDAGIDAVFIVSLTAFLVGIVL 176

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A  G+  L+QFGA I+ ID+M +L LREI  L+ A++IAGRS S+  A+IG MKI EEID
Sbjct: 177 AYIGSDMLAQFGASIYIIDIMGMLTLREIAPLIAAIVIAGRSASSFTAQIGVMKITEEID 236

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG D    L  PRI A+II  P +  LA+  +I    IV   Y +I FA +  RF 
Sbjct: 237 AMKTMGFDPFYFLCMPRILAMIIITPFVIFLADAVSIFSQMIVCDAYLEISFADYLERFK 296

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           ST  + +   G++KAPF    I IV    GF V   + S+G+  T  VV +I  VI +D+
Sbjct: 297 STIEIRHFLVGIVKAPFFGAIIAIVGCLRGFEVKNDTQSIGEYTTISVVNAIFWVIALDA 356

Query: 363 LFAIFYFAIGI 373
            FA+ +  + I
Sbjct: 357 FFAVMFSELKI 367


>gi|296134762|ref|YP_003642004.1| protein of unknown function DUF140 [Thiomonas intermedia K12]
 gi|295794884|gb|ADG29674.1| protein of unknown function DUF140 [Thiomonas intermedia K12]
          Length = 380

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 192/366 (52%), Gaps = 20/366 (5%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
             V R  G W +  ++   +  + A  +        +D SA T +DT GA L++  M ++
Sbjct: 27  RRVCRLQGAWNAQGLAREPNTHLPAGTRH-----VTLDASA-TTLDTPGALLLVRSMAQW 80

Query: 66  ---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                 + + G+S   +QL  L+    ++ +      R         L   IG+  +  +
Sbjct: 81  QSAGATVDVSGLSPPQQQLLDLV---RQRALALPPAARR------LGLLGDIGRATLIAL 131

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           ++  +    +G ++          ++ +     +I ++   G+  + ++ L+SF+ G V+
Sbjct: 132 DELRALLAFVGELVWRGAPLLLQPWRVR--WREVIHEIDAAGLRAIGIIGLLSFLIGMVM 189

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A Q    L+ +GA I  ++L+SI+ LRE+G LLTA+++AGR+GS+  A+IG+M+I EE+D
Sbjct: 190 AYQAGATLATYGANILIVNLVSIITLRELGPLLTAILVAGRTGSSYTAQIGTMRITEEVD 249

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R +GL    +L+ P++ AL+I+LPLL + A+   + G  +V    Y +P + + +R  
Sbjct: 250 ALRALGLSPFEMLVLPKVIALVITLPLLALFADVMGLAGGGVVAAVGYGVPLSEYVARIP 309

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L  +  GL+KAP  A  I +V   +G  V   + ++G+  T  VVQ+I +VI+ID+
Sbjct: 310 QVVGLKTLVLGLVKAPVFAVVIALVGCMQGLRVAGSAAAVGRATTVSVVQAIFLVIVIDA 369

Query: 363 LFAIFY 368
            F++ Y
Sbjct: 370 SFSVLY 375


>gi|121592684|ref|YP_984580.1| hypothetical protein Ajs_0250 [Acidovorax sp. JS42]
 gi|120604764|gb|ABM40504.1| protein of unknown function DUF140 [Acidovorax sp. JS42]
          Length = 372

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 85/371 (22%), Positives = 177/371 (47%), Gaps = 11/371 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
                 + +  G+W +   ++      +A             L  +  +D +GA+++   
Sbjct: 12  DHAARPLAQPQGDWVAAAFADRRAWRRVAAQLKECGPGVAWSLQGVQRLDHVGAQILWNH 71

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
             +     +   ++ +  ++   ++  +    +   P R        +    +G  ++  
Sbjct: 72  WGRAWP--EQLELTENQREMLERVAQ-YTTPCEPPAPWR------LGDQVDRLGVMVLHA 122

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           ++       ++G ++ +      +    +G    +   +Y +G + +P+  L+ F+ G V
Sbjct: 123 LDHVRHLVILVGQLVLDVLRLLRNPR--RGPWRDISGHLYRMGATALPITALVGFLIGVV 180

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A   + QL QFGAE F ++++ I  +RE+G +L A+++AGRSGSAI A+IG M++ EE+
Sbjct: 181 LAYLMSLQLRQFGAEAFIVNILGISLIRELGPMLGAILVAGRSGSAITAQIGVMRVTEEL 240

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+R MG+     L+ PR  AL +++PL+ +    +A+ G  +       I  A F    
Sbjct: 241 DAMRVMGIPHGFRLVMPRALALALAMPLVALWTTLAALAGGMLAADLTMGISSAYFAQAL 300

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            +   ++N++  + K+      I ++    G  V  ++ SLG+  T  VV +I++VII+D
Sbjct: 301 PAAVNVSNLWLAMSKSVVFGVFIALIGCHWGLRVKPNTQSLGEGTTASVVSAITMVIIVD 360

Query: 362 SLFAIFYFAIG 372
           +LFA+ +  +G
Sbjct: 361 ALFAVAFKNVG 371


>gi|54297975|ref|YP_124344.1| hypothetical protein lpp2030 [Legionella pneumophila str. Paris]
 gi|53751760|emb|CAH13182.1| hypothetical protein lpp2030 [Legionella pneumophila str. Paris]
          Length = 374

 Score =  262 bits (671), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 111/374 (29%), Positives = 193/374 (51%), Gaps = 13/374 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---M 59
           E     ++  G+W    +  +      +I+    S    ++   I+  D+ GA  +   +
Sbjct: 11  EQKNATYQCCGSWSVLTLDGLPKKF--SISPLPDSQQITINGEKISVFDSAGALALKKCI 68

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
             ++K + +++L   S   +Q+  LI  + ++ +  Q P  S      + + Y IGK+  
Sbjct: 69  DELKKRNNQVELVNFSDSQQQMLELIE-SKQEILSYQLPAVSK-----EGVLYQIGKESE 122

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
             ++       ++G + +   E  A   +F   L S++  +   G+  +P++ L+SF+ G
Sbjct: 123 NKLHQVDGLIILIGDLSTRLFEAFAYWRRF--HLPSIVSVIDSAGLKALPIIGLLSFLIG 180

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A Q   QL  +GA IF   L  +   RE G L+TA+++AGR+ S+  A+IGSMKINE
Sbjct: 181 VVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMKINE 240

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DAI TMGL    +L+ P++  L+I  PLL   A+  +I GA I+     +I F  F +
Sbjct: 241 EVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFEDFLT 300

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           R   +  L  +  GL KAP  +  I +V   +GF V   ++S+G + T  VVQ++ ++II
Sbjct: 301 RLRDSVGLNQMMLGLYKAPAFSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFLIII 360

Query: 360 IDSLFAIFYFAIGI 373
            D+ F+I Y  +G+
Sbjct: 361 ADAAFSIAYSWMGL 374


>gi|294338723|emb|CAZ87055.1| putative ABC-type transport system, permease component [Thiomonas
           sp. 3As]
          Length = 380

 Score =  262 bits (670), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 191/366 (52%), Gaps = 20/366 (5%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
             V R  G W +  ++   +  + A  +        +D SA T +DT GA L++  M ++
Sbjct: 27  RRVCRLQGAWNAQGLAREPNTHLPAGTRH-----VTLDASA-TTLDTPGALLLVRSMAQW 80

Query: 66  ---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                 +   G+S   +QL  L+    ++ +      R         L   IG+  +  +
Sbjct: 81  QSAGATVDASGLSPPQQQLLDLV---RQRALALPPAARR------LGLLGDIGRATLIAL 131

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           ++  +    +G ++          ++ +     +I ++   G+  + ++ L+SF+ G V+
Sbjct: 132 DELRALLAFVGELVWRGAPLLLQPWRVR--WREVIHEIDAAGLRAIGIIGLLSFLIGMVM 189

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A Q    L+ +GA I  ++L+SI+ LRE+G LLTA+++AGR+GS+  A+IG+M+I EE+D
Sbjct: 190 AYQAGATLATYGANILIVNLVSIITLRELGPLLTAILVAGRTGSSYTAQIGTMRITEEVD 249

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R +GL    +L+ P++ AL+I+LPLL + A+   + G  +V    Y +P + + +R  
Sbjct: 250 ALRALGLSPFEMLVLPKVIALVITLPLLALFADVMGLAGGGVVAAVGYGVPLSEYVARIP 309

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L  +  GL+KAP  A  I +V   +G  V   + ++G+  T  VVQ+I +VI+ID+
Sbjct: 310 QVVGLKTLVLGLVKAPVFAVVIALVGCMQGLRVAGSAAAVGRATTVSVVQAIFLVIVIDA 369

Query: 363 LFAIFY 368
            F++ Y
Sbjct: 370 SFSVLY 375


>gi|257459529|ref|ZP_05624638.1| ABC transport system permease [Campylobacter gracilis RM3268]
 gi|257442954|gb|EEV18088.1| ABC transport system permease [Campylobacter gracilis RM3268]
          Length = 367

 Score =  262 bits (670), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 114/372 (30%), Positives = 174/372 (46%), Gaps = 14/372 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S  G       G W           ++         +   + LS I+ +D   A +I   
Sbjct: 10  SSGGKNTLSLRGQW---NYKSSRSQLLALKKAVKNLNELELSLSEISNLDYFMALMIKNA 66

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
           +     ++ L   S    ++ S +           + +R        N    IG      
Sbjct: 67  L--AGKRVSLVEDSCKAAKILSFMDDKTIDFSYVPESRR-------LNFLAQIGLYCHLG 117

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           I    S A  LG   S    F     KF+      +  +   G+  + +V L +F+ G V
Sbjct: 118 ILGLLSLASFLGEFFSKLAAFIIHPMKFR--FKETVNFIKDSGIDALFIVSLTAFLIGIV 175

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A  G+  LS+FGA I+ ID+M  L LRE+  L+ A++IAGRS S+  A+IG MKI EEI
Sbjct: 176 LAYIGSDMLSKFGASIYIIDIMGALTLREVAPLIAAIVIAGRSASSFTAQIGVMKITEEI 235

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+RTMG D    L  PRI A+++ +PL+  +A+  +I    IV   Y DI F+ +  RF
Sbjct: 236 DAMRTMGFDPFYFLAMPRIIAMVLIMPLVIFIADSVSIFAQMIVCDAYLDIAFSDYLDRF 295

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            ++  L +   G+IKAPF    I I+    GF V  ++ S+G+  T  VV +I  VI ID
Sbjct: 296 KASVELRHFLVGMIKAPFFGAFIAIIGCMRGFEVKGNTQSIGEYTTISVVNAIFWVIAID 355

Query: 362 SLFAIFYFAIGI 373
           ++FA+ +  IG+
Sbjct: 356 AVFAVLFSEIGL 367


>gi|260425314|ref|ZP_05779294.1| ABC transporter, inner membrane subunit [Citreicella sp. SE45]
 gi|260423254|gb|EEX16504.1| ABC transporter, inner membrane subunit [Citreicella sp. SE45]
          Length = 366

 Score =  262 bits (670), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 116/355 (32%), Positives = 198/355 (55%), Gaps = 7/355 (1%)

Query: 22  EIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK---IKLQGVSTHI 78
            +A           +      DLS +  +DT GA L+         +   I + G S   
Sbjct: 16  NLASLASTRAILGCEGTIKAFDLSGVGVLDTAGAWLLASCRNAAALRGETIAVIGASPAQ 75

Query: 79  EQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISN 138
             L   ++       K ++P+    +++  +    +G+ + K ++        LGLV++ 
Sbjct: 76  TLLLETVTDAMADAAKVRQPR--GLHHAMGDGLVGLGEAVSKKVSSIAESLGFLGLVMAQ 133

Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198
            G       + +  L +L+  M+  G++ VP+V+L+ F+ G V++ QGA QL QFGAE++
Sbjct: 134 FGWTVLHPSRLR--LTALVHHMHLAGLNAVPIVVLMGFLIGIVLSFQGASQLKQFGAEVY 191

Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258
            +DL++I  LRE+G+LLTAV++AGRS SA  A IGSMK+ EEIDA+R +GLD + +L+ P
Sbjct: 192 VVDLIAISILRELGILLTAVIVAGRSASAFTATIGSMKMREEIDAMRVLGLDPIELLVLP 251

Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318
           R+ AL+I LPLL  +A+ + ++G +++ W    I   +F ++  +   ++++  GL KAP
Sbjct: 252 RVLALVILLPLLGFIADMAGLVGGALMAWIELGISPGMFRTQLLNNTDVSHLLIGLAKAP 311

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
             A  IG+V   +G  V   + SLG + +  VV +I +VI++D++F+IF+   GI
Sbjct: 312 VFAVIIGVVGCHQGMQVKGDTESLGNRTSRSVVAAIFLVIVVDAMFSIFFAVWGI 366


>gi|330822969|ref|YP_004386272.1| hypothetical protein Alide2_0328 [Alicycliphilus denitrificans
           K601]
 gi|329308341|gb|AEB82756.1| protein of unknown function DUF140 [Alicycliphilus denitrificans
           K601]
          Length = 372

 Score =  262 bits (669), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 83/372 (22%), Positives = 170/372 (45%), Gaps = 13/372 (3%)

Query: 3   ENGITVFR--FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           ++G    R    G+W +   ++      +A             L  +  +D +GA+++  
Sbjct: 11  QDGTATPRALPQGDWVAAAFADRRAWRRLAAQLKACGPGHAWSLQGLARLDHVGAQVLWN 70

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
              +         +S    ++   ++                      +    +G  +++
Sbjct: 71  HWGRAWPA--QVDLSAAQREMLERVARFSTPCAPAPP-------WRLADQIDRLGVLVLR 121

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
            +        ++G ++ +      +    +     +   +Y +G   + +  L+ F+ G 
Sbjct: 122 ALGHLADMVELVGQLLLDLLRLVRNPA--RAPWRDISGHVYQMGAKALHITALVGFLIGV 179

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A   + QL QFGAE F ++++ I  +RE+G +L A+++AGRSGSAI A+IG M++ EE
Sbjct: 180 VLAYLMSLQLRQFGAEAFIVNILGISLIRELGPMLGAILVAGRSGSAITAQIGVMRVTEE 239

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +DA+R MG+     L+ PR  AL +++PL+ +    +A+ G  +       I  A F   
Sbjct: 240 LDAMRVMGIAHGFRLVMPRALALGLAMPLIALWTTLAALAGGMLAADLTMGISSAYFLQA 299

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             +   ++N++  + K+      I ++    G  V  ++ SLG+  T  VV +I++VI++
Sbjct: 300 LPAAVKVSNLWLAMAKSVVFGVFIALIGCHWGLRVKPNTQSLGEGTTASVVSAITMVIVV 359

Query: 361 DSLFAIFYFAIG 372
           D+LFA+ +  +G
Sbjct: 360 DALFAVAFKNLG 371


>gi|254496222|ref|ZP_05109116.1| ABC transporter, permease [Legionella drancourtii LLAP12]
 gi|254354527|gb|EET13168.1| ABC transporter, permease [Legionella drancourtii LLAP12]
          Length = 375

 Score =  262 bits (669), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 102/373 (27%), Positives = 185/373 (49%), Gaps = 14/373 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-- 60
           +  +  F   G W   ++  +   +  +     Q     V+   I+ +D+ GA  ++   
Sbjct: 11  DEELAQFNCTGRWSVMDVGSLLKKITASTLPKTQ--KIKVNGEGISHLDSAGALALIKCV 68

Query: 61  -FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
             +++   ++ L G S   +QL  LI    +  +  Q P         +N  Y +GK+  
Sbjct: 69  NALKQRDNEVALVGFSKIQQQLLDLIQE-KQGILDYQIPSP-----PKENFLYKLGKESE 122

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
             +        ++G + +   +   +  +F+    S++  +   G+  +P++ L+SF+ G
Sbjct: 123 TKLAQVDGLIILIGDLATKLFDAFGNWRRFQ--WPSIMSNIDATGIKALPILALLSFLIG 180

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A Q   QL+ +GA  F   L  +   RE   L+TA+++AGR+ SA  A++GSMK+NE
Sbjct: 181 VVLAYQMGLQLTTYGANSFIAYLSGMAIFREFAPLITAIIVAGRTSSAYTAQLGSMKVNE 240

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDA+ TMGL    +L+ P++  L+I+ PLL   A+  +I+G+ I+      I F  F  
Sbjct: 241 EIDALLTMGLSPTELLVLPKVLGLLIAFPLLIFWADIFSILGSMIMANNMLGIGFLDFLQ 300

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN-SLGKKVTTCVVQSISIVI 358
           R   +  ++    GL KAP  A  I +V   +GF V   +  ++G + T  VVQS+ ++I
Sbjct: 301 RLRDSVGISQFKLGLYKAPAFALLIALVGCFQGFRVEAGTEKNIGSQTTKSVVQSLFLII 360

Query: 359 IIDSLFAIFYFAI 371
           I D++++I Y  +
Sbjct: 361 IADAIYSIIYSWM 373


>gi|182416429|ref|YP_001821495.1| hypothetical protein Oter_4625 [Opitutus terrae PB90-1]
 gi|177843643|gb|ACB77895.1| protein of unknown function DUF140 [Opitutus terrae PB90-1]
          Length = 376

 Score =  262 bits (669), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 90/374 (24%), Positives = 174/374 (46%), Gaps = 18/374 (4%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-- 60
           +  +      G+W+  +      DVV     S +     + + A+   D+     +    
Sbjct: 18  DGNVLEVELGGSWRITDRRPAWMDVV----SSHRPAKLRLHVDAVERWDSSLLLFLFEIG 73

Query: 61  -FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
            +            +   ++ L + ++ +H   + + +           N    +G   +
Sbjct: 74  EWCRANQVACDTTVLPPRVQTLLTQLASSHATSVPHDRS---------VNFLAVVGNATM 124

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           +    +       G  +    +      KF+      + +M   G   +P+V LI+F+ G
Sbjct: 125 ELSRKTQDFVQFFGECVLGAVKLLKRPDKFR--WRDCLEEMQQCGAMALPIVSLIAFLVG 182

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
             +A  GA  L Q+G +I+  DL+ +  +RE+G ++TAV++AGR+G+A  A++G+MK NE
Sbjct: 183 VTLAYIGALVLRQYGGDIYVADLIGMAMVREMGAVMTAVVLAGRTGAAFAAQLGNMKANE 242

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDA+ T+G+  V+ L+ PR+ AL + +PLL + AN   I+G   V     DI  + ++ 
Sbjct: 243 EIDALETLGISPVQFLVMPRLLALGVMMPLLALYANALGILGGMAVSAGVLDISPSAYWV 302

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
              +  TL ++ +G IKA      +G+     G      +  +G+  T+ VV SI ++++
Sbjct: 303 EMGTIVTLRDVASGFIKAIAFGGIVGLSGCLRGLQAERSAAGVGRAATSAVVTSILLLVV 362

Query: 360 IDSLFAIFYFAIGI 373
            D++FA+ +  IG+
Sbjct: 363 ADAIFAVLFNVIGL 376


>gi|161523583|ref|YP_001578595.1| hypothetical protein Bmul_0403 [Burkholderia multivorans ATCC
           17616]
 gi|189351647|ref|YP_001947275.1| putative ABC transporter permease [Burkholderia multivorans ATCC
           17616]
 gi|160341012|gb|ABX14098.1| protein of unknown function DUF140 [Burkholderia multivorans ATCC
           17616]
 gi|189335669|dbj|BAG44739.1| putative ABC transport system permease protein [Burkholderia
           multivorans ATCC 17616]
          Length = 374

 Score =  262 bits (669), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 101/366 (27%), Positives = 171/366 (46%), Gaps = 11/366 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             R  G W +  ++     VV           +  DLS I  +D +G + +     +  G
Sbjct: 19  TVRLTGQWTALALARNRGAVVRRAESVATGSVSEWDLSGIGRLDHVGGQALW----RVWG 74

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
           +    G++    Q  ++     R   + + P+R         L    G  +  F      
Sbjct: 75  RKLPPGIALTATQ-RTIFERIERLDSQREAPERIVRVGPVTRL----GLMLFAFAEHLHG 129

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              + G VI +                     +Y  G   +P+  L++F+ G V++   A
Sbjct: 130 GIAMFGRVILDALSVLRRPQTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 187

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M
Sbjct: 188 QQLQMFGANRYIVNILGLAVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     LI PR+ AL +++PLL +  N  A+ G ++       I    F         +
Sbjct: 248 GIPHGLRLILPRVLALGVAMPLLVMWTNIVALTGGALAAKMVLGIDVNYFVRSLPGVVPI 307

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN++ GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI 
Sbjct: 308 ANLYIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAIL 367

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 368 FQNVGL 373


>gi|53724609|ref|YP_101915.1| ABC transporter permease [Burkholderia mallei ATCC 23344]
 gi|52428032|gb|AAU48625.1| ABC transporter, permease protein [Burkholderia mallei ATCC 23344]
          Length = 355

 Score =  262 bits (669), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 98/364 (26%), Positives = 173/364 (47%), Gaps = 11/364 (3%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           R  G W +  ++    +V   I +  +      DLS +  +D +G + +     +  G+ 
Sbjct: 2   RLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALW----RVWGRR 57

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
              G++    Q   +     R     + P+     +         G+ +  F        
Sbjct: 58  LPDGIALTDNQRV-VFKRIERLDAGRESPEPVVRIDPVTRF----GQGLFTFGEHLYGGI 112

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
            +LG +I +                 +   +Y  G   +P+  L++F+ G V++   A Q
Sbjct: 113 ALLGGLIVDLLAVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIVLSYLSAQQ 170

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R MG+
Sbjct: 171 LQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVMGI 230

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
                +  PR+ AL +++PLL +  N  A+ G ++       I    F     S   +AN
Sbjct: 231 PHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSLPSVVPIAN 290

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           +F GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI + 
Sbjct: 291 LFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAILFQ 350

Query: 370 AIGI 373
            +G+
Sbjct: 351 NVGL 354


>gi|121998618|ref|YP_001003405.1| hypothetical protein Hhal_1839 [Halorhodospira halophila SL1]
 gi|121590023|gb|ABM62603.1| protein of unknown function DUF140 [Halorhodospira halophila SL1]
          Length = 376

 Score =  262 bits (669), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 109/367 (29%), Positives = 187/367 (50%), Gaps = 12/367 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R  G+W           ++  + ++       VDLSA+  +DT GA L+   +     +
Sbjct: 18  VRIRGDWTLAHY----RTLLRQVEQTRLGGEPRVDLSALGRLDTAGATLLARLLGAARVE 73

Query: 69  I---KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
                   +S    +L   ++    +     +P+   ++     L   +G ++    +  
Sbjct: 74  ALARSTPELSAERRKLLQAVAAASERARTAPEPRGDPYF--LGQLTIGLGAQMTHAGHQL 131

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                  GLVI+         ++++  L ++ RQ+ +  +  +P+V L++F  GAVIA  
Sbjct: 132 ARAIGFTGLVIAAFAAGLLRPWRWR--LAAVSRQLQHTALEALPIVALLTFAVGAVIAVL 189

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           G   L +FGA IF++DL++   LRE GV+LTA+++AGRS SA  A+IGSMK NEE+DA+R
Sbjct: 190 GVTVLGRFGAGIFTVDLVAYAFLREFGVVLTAILLAGRSASAFTAQIGSMKANEELDAMR 249

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
             G   + +L+ PR+ AL+I++PLL+ +A    + G  +V     D+P     +  +S  
Sbjct: 250 AQGFSPIEMLVIPRVVALLIAVPLLSFVAVVCGLAGGGLVTLLNVDVPAGRIIA-LYSDI 308

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           ++++   GL KAP  A  I I+   EG      + S+G   T+ VVQSI  VII++++ A
Sbjct: 309 SVSHYLAGLAKAPIFAFVIAIIGCLEGIKCSASAQSVGTHTTSAVVQSIFWVIILNAVAA 368

Query: 366 IFYFAIG 372
           + Y  +G
Sbjct: 369 LIYVELG 375


>gi|89256086|ref|YP_513448.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica LVS]
 gi|115314562|ref|YP_763285.1| ABC transporter ATP-binding protein [Francisella tularensis subsp.
           holarctica OSU18]
 gi|156502103|ref|YP_001428168.1| ABC transporter membrane protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|167010771|ref|ZP_02275702.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica FSC200]
 gi|254367414|ref|ZP_04983440.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica 257]
 gi|290954528|ref|ZP_06559149.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312044|ref|ZP_06802859.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica URFT1]
 gi|89143917|emb|CAJ79136.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica LVS]
 gi|115129461|gb|ABI82648.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Francisella tularensis subsp. holarctica OSU18]
 gi|134253230|gb|EBA52324.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica 257]
 gi|156252706|gb|ABU61212.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
          Length = 366

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 101/355 (28%), Positives = 171/355 (48%), Gaps = 4/355 (1%)

Query: 17  SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVST 76
              + +I   +V       +     +D++ I  +DT GA  I+  ++    ++  + +  
Sbjct: 15  LLTLKQINPKLVEKKVSRSKVKLNRIDITKIQALDTAGAYFILKVLKDL--ELTKEDLIF 72

Query: 77  HIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVI 136
              +  +LI             + S   N      Y +GK     + +  +    LG ++
Sbjct: 73  DNHKDKNLIELVANNFPTRVDKENSHKSNIVFTSIYTLGKNTNNLLQEIKASIGFLGAIL 132

Query: 137 SNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE 196
                       ++ F   ++   Y   +  + +V+L+S + G V+       + Q+  +
Sbjct: 133 LGYLTLIRKP--YRSFFSIVLNIAYDSTIKALSIVMLLSLIIGLVLTYLPLNLMMQYSTQ 190

Query: 197 IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILI 256
           IF +D++ I   RE   L TA++IAGRS SA  +EIG MK+NEEIDA++T+G D ++ L+
Sbjct: 191 IFVVDMLGISSFREFAPLFTAIIIAGRSSSAFTSEIGIMKVNEEIDALQTIGEDPIQRLV 250

Query: 257 SPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316
            PRI ALIISLP+LT++A  + II   I+      I    F  R  S   + + + GL+K
Sbjct: 251 LPRITALIISLPVLTVIAMIANIISGIIIADVIAGITPLQFIERLFSNVNVNHFYIGLLK 310

Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
            PF A  I  +   +G AV   S S+GK  T  VV SI ++I+ID++FA+    +
Sbjct: 311 TPFFALVIAGIGCHQGLAVRRDSQSVGKATTNSVVYSIFLIIVIDAIFAVALNGV 365


>gi|30248137|ref|NP_840207.1| ABC transporter permease [Nitrosomonas europaea ATCC 19718]
 gi|30180022|emb|CAD84017.1| possible ABC transport permease [Nitrosomonas europaea ATCC 19718]
          Length = 386

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 90/375 (24%), Positives = 183/375 (48%), Gaps = 15/375 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINK---SIQSDSAIVDLSAITEIDTIGAELI 58
           +  G T+ +  G++    +      V   + K      + S   DL+ ++++D  GA ++
Sbjct: 20  TAAGDTLLQLTGSFTLTSLDRSFPTVTKELAKLASQSDASSLHWDLTDVSQLDYAGAVML 79

Query: 59  MYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
                +  G+ +   +    EQ    +       +  Q  +  F   S       +GK++
Sbjct: 80  W----RIWGEQRPAHLLLRPEQERMFLRLEKSVSLPEQPRRILFLPISM------LGKQL 129

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           ++F++       + G ++ +   F   ++  +     +   +Y  G   + +  ++ F+ 
Sbjct: 130 LRFLDHLTGMITLSGQIVLDL--FFLMTHPGRIPAREISANLYRTGAQALGITAVVGFLI 187

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G V++   + QL  FGA+I+ ++++ +  +RE+G +L A+++AGRSGSA+ A++G M++ 
Sbjct: 188 GIVLSYLTSEQLHMFGADIYIVNILGMSIIRELGPMLAAILVAGRSGSAMTAQLGVMRVT 247

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE+DA+  MG+     L+ P+I  L I+LPL+ +  +  A++G  +       +      
Sbjct: 248 EELDALTVMGIPHSMRLVLPKIIGLGIALPLIVLWTSAIALLGGLVAAELQIGLSIHYAL 307

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +    T  +AN++ GL K       I ++A   G  +  ++ SLG+  T  VV SI+ VI
Sbjct: 308 TALPDTVPIANLWLGLGKGMVCGMTIALIACHFGLRIKPNTESLGEGTTNSVVTSITAVI 367

Query: 359 IIDSLFAIFYFAIGI 373
           +ID++FA+ +  IGI
Sbjct: 368 LIDAIFAVAFSNIGI 382


>gi|54294946|ref|YP_127361.1| hypothetical protein lpl2025 [Legionella pneumophila str. Lens]
 gi|53754778|emb|CAH16265.1| hypothetical protein lpl2025 [Legionella pneumophila str. Lens]
          Length = 374

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 112/374 (29%), Positives = 191/374 (51%), Gaps = 13/374 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---M 59
           E     ++  G+W    +  +    +        S    ++   I+  D+ GA  +   +
Sbjct: 11  EQKNATYQCCGSWSVLTLEGLPKKFI--TGSLPDSQQITINGEKISAFDSAGALALKKCI 68

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
             ++K + +I+L   S   +Q+  LI  + ++ +  Q P  S      + + Y IGK+  
Sbjct: 69  DELKKRNNQIELVNFSDSQQQMLELIE-SKQEILSYQLPAVSK-----EGVLYQIGKESE 122

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
             ++       ++G + +   E  A   +F   L S++  +   G+  +P++ L+SF+ G
Sbjct: 123 NKLHQVDGLIILIGDLSTRLFEAFAYWRRF--HLPSIVSVIDSAGLKALPIIGLLSFLIG 180

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A Q   QL  +GA IF   L  +   RE G L+TA+++AGR+ S+  A+IGSMKINE
Sbjct: 181 VVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMKINE 240

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DAI TMGL    +L+ P++  L+I  PLL   A+  +I GA I+     +I F  F S
Sbjct: 241 EVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFEDFLS 300

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           R   +  L  +  GL KAP  +  I +V   +GF V   ++S+G + T  VVQ++ ++II
Sbjct: 301 RLRDSVGLNQMMLGLYKAPAFSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFLIII 360

Query: 360 IDSLFAIFYFAIGI 373
            D+ F+I Y  +G+
Sbjct: 361 ADAAFSIAYSWMGL 374


>gi|329851286|ref|ZP_08266043.1| hypothetical protein ABI_41270 [Asticcacaulis biprosthecum C19]
 gi|328840132|gb|EGF89704.1| hypothetical protein ABI_41270 [Asticcacaulis biprosthecum C19]
          Length = 363

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 113/365 (30%), Positives = 180/365 (49%), Gaps = 9/365 (2%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R  GNW    I  +++ +  A+          VD S I  +DT GA L+   +      
Sbjct: 2   LRPKGNWIVTRIEGLSERLRQALKS---YQQITVDGSQIEALDTAGAYLLRTAVGDRLQG 58

Query: 69  IKLQGVSTHIEQLFSLISFTHRKK---IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
               G   +  +L+ ++           +        + + F      +GK   +F    
Sbjct: 59  EVFAG-QDNFARLYGIVGNHAAPISNYAQENPEPPKMWLHPFYFGLVKLGKLAERFKTGF 117

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            +QA  +G +I+      A     +    +L+  M   G+  +P+V++ SF  GAV+   
Sbjct: 118 IAQAVFMGHIIAQLMISIAKPGSMR--WAALVNVMQRAGIEAIPIVLMTSFFIGAVLGFI 175

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           G  QL+QFG+ IF++D++++  LRE   L+TAV++AGRS SA  AE+G+MK+N+EIDA+R
Sbjct: 176 GVLQLNQFGSGIFAVDMVAMFALREFAPLVTAVLLAGRSASAFAAEVGAMKMNQEIDAMR 235

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MG+D    LI PR+  L++    +T L+    + G  + IW       +VF  R     
Sbjct: 236 VMGIDPYEALILPRLIGLVLMSTFITFLSTLGMMFGGMLAIWSALGAGPSVFLQRVQDYV 295

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
              N F G+++ PF A  I IV   +G  V     SLG++VTT VVQSI +V ++D+LFA
Sbjct: 296 PFYNFFVGIVRPPFFAATIAIVGCWQGMQVKDDVLSLGRQVTTAVVQSIFLVFMLDALFA 355

Query: 366 IFYFA 370
           I +  
Sbjct: 356 ILFNG 360


>gi|121607910|ref|YP_995717.1| hypothetical protein Veis_0920 [Verminephrobacter eiseniae EF01-2]
 gi|121552550|gb|ABM56699.1| protein of unknown function DUF140 [Verminephrobacter eiseniae
           EF01-2]
          Length = 374

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 175/365 (47%), Gaps = 13/365 (3%)

Query: 11  FAGNWKSPEISEIADDVVMA--INKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
             G W + E+   A    ++  + K     +   DL A+  +D +GA+L+    ++    
Sbjct: 21  LYGRWGAAELGNAAQWQALSGQLRKHPAVPTLGWDLRALQWLDHVGAQLLWNHWQRAWP- 79

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
            +    +     + + ++           P R            H+G  ++  +  +   
Sbjct: 80  -QQLACTDSQRSMLARVAQ-FSTTAPPPAPWR------LAAQVDHLGLLVLHGVEHARHI 131

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             +LG ++ +      +    +G    +   +Y +G + +P+  L+ F+ G V+A   + 
Sbjct: 132 LEMLGQLVLDLARLARAPR--RGPWRDVSGHLYRMGATALPITALVGFLIGVVLAYLMSL 189

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           QL QFGAE F ++++ I  +RE+G +L A+++AGRSGSAI A+IG M++ EE+DA+R MG
Sbjct: 190 QLRQFGAESFIVNILGISLIRELGPMLAAILVAGRSGSAITAQIGVMRVTEELDAMRVMG 249

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +     L+ PR  AL +++PLL++    +A+ G  +       I  A F     +     
Sbjct: 250 IAHGFRLVLPRTLALALAMPLLSLWTTLAALAGGMLAADLTMGISPAYFAQALPAAVRPG 309

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           N+   + K+      I ++    G  V   + SLG+  T  VV +I++VI++D+LFA+ +
Sbjct: 310 NLGLAMAKSVVFGAGIALIGCHWGLRVRPDTQSLGEGTTASVVSAITMVIVVDALFAVTF 369

Query: 369 FAIGI 373
             IGI
Sbjct: 370 KTIGI 374


>gi|307610778|emb|CBX00391.1| hypothetical protein LPW_21111 [Legionella pneumophila 130b]
          Length = 374

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 112/374 (29%), Positives = 190/374 (50%), Gaps = 13/374 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---M 59
           E     ++  G+W    +  +    +        S    ++   I+  D+ GA  +   +
Sbjct: 11  EQKNATYQCCGSWSVLTLEGLPKKFI--TGSLPDSQQITINGEKISAFDSAGALALKKCI 68

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
             ++K + +I+L   S   +Q+  LI  + +  +  Q P  S      + + Y IGK+  
Sbjct: 69  DELKKRNNQIELVNFSDSQQQMLELIE-SKQDILSYQLPAVSK-----EGVLYQIGKESE 122

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
             ++       ++G + +   E  A   +F   L S++  +   G+  +P++ L+SF+ G
Sbjct: 123 NKLHQVDGLIILIGDLSTRLFEAFAYWRRF--HLPSIVSVIDSAGLKALPIIGLLSFLIG 180

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A Q   QL  +GA IF   L  +   RE G L+TA+++AGR+ S+  A+IGSMKINE
Sbjct: 181 VVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMKINE 240

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DAI TMGL    +L+ P++  L+I  PLL   A+  +I GA I+     +I F  F S
Sbjct: 241 EVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFEDFLS 300

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           R   +  L  +  GL KAP  +  I +V   +GF V   ++S+G + T  VVQ++ ++II
Sbjct: 301 RLRDSVGLNQMMLGLYKAPAFSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFLIII 360

Query: 360 IDSLFAIFYFAIGI 373
            D+ F+I Y  +G+
Sbjct: 361 ADAAFSIAYSWMGL 374


>gi|222109464|ref|YP_002551728.1| hypothetical protein Dtpsy_0244 [Acidovorax ebreus TPSY]
 gi|221728908|gb|ACM31728.1| protein of unknown function DUF140 [Acidovorax ebreus TPSY]
          Length = 372

 Score =  260 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 85/371 (22%), Positives = 176/371 (47%), Gaps = 11/371 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
                 + +  G W +   ++      +A             L  +  +D +GA+++   
Sbjct: 12  DHAARPLAQPQGEWVAAAFADRRAWRRVAAQLKDCGPGVAWSLQGVQRLDHVGAQILWNH 71

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
             +     +   ++ +  ++   ++  +    +   P R        +    +G  ++  
Sbjct: 72  WGRAWP--EQLELTENQREMLERVAQ-YTTPCEPPAPWR------LGDQVDRLGVLVLHA 122

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           ++       ++G ++ +      +    +G    +   +Y +G + +P+  L+ F+ G V
Sbjct: 123 LDHVRHLVILVGQLVLDVLRLLRNPR--RGPWRDISGHLYRMGATALPITALVGFLIGVV 180

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A   + QL QFGAE F ++++ I  +RE+G +L A+++AGRSGSAI A+IG M++ EE+
Sbjct: 181 LAYLMSLQLRQFGAEAFIVNILGISLIRELGPMLGAILVAGRSGSAITAQIGVMRVTEEL 240

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+R MG+     L+ PR  AL +++PL+ +    +A+ G  +       I  A F    
Sbjct: 241 DAMRVMGIPHGFRLVMPRALALALAMPLVALWTTLAALAGGMLAADLTMGISSAYFAQAL 300

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            +   ++N++  + K+      I ++    G  V  ++ SLG+  T  VV +I++VII+D
Sbjct: 301 PAAVNVSNLWLAMSKSVVFGVFIALIGCHWGLRVKPNTQSLGEGTTASVVSAITMVIIVD 360

Query: 362 SLFAIFYFAIG 372
           +LFA+ +  +G
Sbjct: 361 ALFAVAFKNVG 371


>gi|71906845|ref|YP_284432.1| hypothetical protein Daro_1206 [Dechloromonas aromatica RCB]
 gi|71846466|gb|AAZ45962.1| Protein of unknown function DUF140 [Dechloromonas aromatica RCB]
          Length = 368

 Score =  260 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 93/365 (25%), Positives = 169/365 (46%), Gaps = 13/365 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
              +G W   E+  +   +   +       +   DLSA+T +D+  A L+          
Sbjct: 14  VVLSGAWTLAEMLPMLSFLQAELTNQ-SHHTRHWDLSAVTRLDSAAAVLLWRTWGGQWP- 71

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
                 S  ++++   +      ++  + P++        +L   IG  + K + +    
Sbjct: 72  -----ASLDVDEMHRAV-LVRVAELPREMPEQVL---PRVHLPEFIGVLLFKALANVRGM 122

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             + G ++ +                     +Y  G   +PV  L+ F+ G  I+   A 
Sbjct: 123 VALFGQLLLDCAYLFRHPKDVP--WREFTSNVYKAGALALPVTALVGFLIGVTISYLSAL 180

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           QL  FGA++F ++++ I  +RE+G +L AV++AGRSGSA+ A+IG M++ EEIDA+ TMG
Sbjct: 181 QLKSFGADLFIVNILGISIIRELGPVLVAVLVAGRSGSAMTAQIGVMRVTEEIDALSTMG 240

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +     ++ P+++ L +++PLL +  +  A+ G  +      D+    F         +A
Sbjct: 241 ISRSIRVVLPKVFGLTVAMPLLVLWTSAVALFGGMLAALMQLDLSLIYFLENLPRAVPVA 300

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           N+F GL K         +VA   G  V  ++ SL    T+ VV +I+ VI++D++FAIF 
Sbjct: 301 NLFIGLGKGLVFGFVTAVVACHFGLHVKPNTESLSANTTSAVVTAITSVILVDAIFAIFT 360

Query: 369 FAIGI 373
             IG+
Sbjct: 361 RQIGV 365


>gi|301060039|ref|ZP_07200913.1| conserved hypothetical protein [delta proteobacterium NaphS2]
 gi|300445918|gb|EFK09809.1| conserved hypothetical protein [delta proteobacterium NaphS2]
          Length = 376

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 96/376 (25%), Positives = 179/376 (47%), Gaps = 12/376 (3%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAEL--- 57
           ++E+        GNW+       +  ++  +++         D + +   D+        
Sbjct: 10  LTESETLTVHLQGNWQMESGVPSSGALLDQLDQHSSIKRIEFDATELGSWDSSLPIFFFE 69

Query: 58  IMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
           I     +   K++  G+   + QL  L +   +K+   Q   R+ F+        H+G +
Sbjct: 70  ISKLAVEKKTKVQKDGLPAGVRQLIDLATAVPKKEDARQTVSRAGFFG-------HVGSE 122

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           ++ F   +      +G              +F+   L +  Q    G   VP+V LISF+
Sbjct: 123 VIDFTKSAGELITFIGAAFEAFVRMITGRARFRATDLGIFLQ--EAGAQAVPIVSLISFL 180

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G ++A  G  QLS FGA+++  DL+ I  +RE+G ++T +++AGR+G+A  A++G+M++
Sbjct: 181 VGLILAFVGILQLSMFGAQVYVADLVGIAMVREMGAIMTGIIMAGRTGAAYAAQLGTMQV 240

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
           NEEIDA+ T+ +  +  L+ PR+ AL + +PLL + A+   I+G ++V    Y I   V+
Sbjct: 241 NEEIDALETLAIPPMEFLVLPRMVALAVMMPLLVLYADLMGILGGALVAVGMYKIDIIVY 300

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            SR  S  TL+++F GL         + +     G   G  ++++G   T+ VV  I  +
Sbjct: 301 LSRTKSAVTLSDLFIGLFMGAVFGVLVALSGCLRGIQCGRSASAVGDATTSAVVTGIVAI 360

Query: 358 IIIDSLFAIFYFAIGI 373
           II  ++  +    +GI
Sbjct: 361 IIATAVITVLCSILGI 376


>gi|217970678|ref|YP_002355912.1| hypothetical protein Tmz1t_2277 [Thauera sp. MZ1T]
 gi|217508005|gb|ACK55016.1| protein of unknown function DUF140 [Thauera sp. MZ1T]
          Length = 371

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 101/369 (27%), Positives = 174/369 (47%), Gaps = 12/369 (3%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G    R AG+W    + E    +  A+        A   L A+  +D+ GA L+     +
Sbjct: 13  GAEGIRLAGDWTLRGLDECLPTLRRALATV--PPDARWSLRAVRRMDSFGALLLW----Q 66

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
             G      +     Q   +    +       +P R+   ++   L    GK +  F   
Sbjct: 67  AWGGRWPAALEADDAQRAIIGRIENASARALPEPPRASALDAVALL----GKGLFAFAGH 122

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                 +LG ++ + G        +   LL +   ++ VGV  +PV  L+ F+ G V++ 
Sbjct: 123 LSGFVALLGRLVLDLGHLLHHPRDWP--LLEISANLHKVGVKAMPVSALVGFLIGVVLSY 180

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
             A QL  FGA+ F ++++ +  +RE+G +L +V++AGRSGSA+ A++G M++ EEIDA+
Sbjct: 181 LSALQLRTFGADAFIVNILGMGIIRELGPVLVSVLVAGRSGSAMTAQLGVMRVTEEIDAL 240

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+     L+ P++ AL +++PLL +  +  A+ G  +  W    I    F       
Sbjct: 241 AAMGVSRSLRLVLPKVVALSLAMPLLVLWTSAIALFGGWVSAWVELGIGLQFFLRALPDA 300

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             +AN++ GL K       I +VA   G  V   + SL    T  VV +I++VI++D++F
Sbjct: 301 VPVANLYIGLAKGAVFGFLIALVACHFGLRVKPDTESLSANTTASVVAAITVVILVDAVF 360

Query: 365 AIFYFAIGI 373
           AI   +IG+
Sbjct: 361 AIATRSIGL 369


>gi|148359621|ref|YP_001250828.1| ABC transporter permease [Legionella pneumophila str. Corby]
 gi|296107663|ref|YP_003619364.1| putative ABC transport system permease protein [Legionella
           pneumophila 2300/99 Alcoy]
 gi|148281394|gb|ABQ55482.1| ABC transporter, permease [Legionella pneumophila str. Corby]
 gi|295649565|gb|ADG25412.1| putative ABC transport system permease protein [Legionella
           pneumophila 2300/99 Alcoy]
          Length = 374

 Score =  259 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 110/374 (29%), Positives = 190/374 (50%), Gaps = 13/374 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---M 59
           E     ++  G+W    +  +    +        S    ++   I+  D+ GA  +   +
Sbjct: 11  EQKNATYQCCGSWSVLTLEGLPKKFI--TGPLPDSQQITINGEKISVFDSAGALALKKCI 68

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
             ++K + +++L   S   +Q+  LI  + +  +  Q P       S + + Y IGK+  
Sbjct: 69  DELKKRNNQVELVNFSDSQQQMLELIE-SKQDILSYQLP-----IVSKEGVLYQIGKESE 122

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
             ++       ++G + +   E  A   +F   L S++  +   G+  +P++ L+SF+ G
Sbjct: 123 NKLHQVDGLIILIGDLSTRLFEAFAYWRRF--HLPSIVSVIDSAGLKALPIIGLLSFLIG 180

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A Q   QL  +GA IF   L  +   RE G L+TA+++AGR+ S+  A+IGSMKINE
Sbjct: 181 VVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMKINE 240

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DAI TMGL    +L+ P++  L+I  PLL   A+  +I GA I+     +I F  F +
Sbjct: 241 EVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFEDFLT 300

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           R   +  L  +  GL KAP  +  I +V   +GF V   ++S+G + T  VVQ++ ++II
Sbjct: 301 RLRDSVGLNQMMLGLYKAPAFSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFLIII 360

Query: 360 IDSLFAIFYFAIGI 373
            D+ F+I Y  +G+
Sbjct: 361 ADAAFSIAYSWMGL 374


>gi|330818440|ref|YP_004362145.1| hypothetical protein bgla_1g35860 [Burkholderia gladioli BSR3]
 gi|327370833|gb|AEA62189.1| hypothetical protein bgla_1g35860 [Burkholderia gladioli BSR3]
          Length = 395

 Score =  259 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 101/387 (26%), Positives = 183/387 (47%), Gaps = 32/387 (8%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDS---------------------AIVDLSA 46
           + R +G W +  ++     VV  ++K  +  +                     +  DLSA
Sbjct: 19  IVRLSGQWTALALARDRGVVVRRVHKLARGPARAGGRMPALGAGSAAAQGGPVSRWDLSA 78

Query: 47  ITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106
           I  +D +G + +     +  G    +G++    Q  ++     R     ++P+    ++ 
Sbjct: 79  IDRLDHVGGQALW----RVWGHRLPEGLTLTDNQ-RTIFERIQRLDEAREEPEPVIRHDP 133

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
              L    G  +++F         + G VI + G               +   +Y  G  
Sbjct: 134 VTRL----GLALMQFGEHLFGGIAMFGRVILDLGSIARRPKTMP--WTEISANVYNAGAK 187

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +P+  L++F+ G V++   A QL QFGA  + ++++ +  +RE+G +L A+++AGRSGS
Sbjct: 188 ALPITALVAFLIGIVLSYLSAQQLQQFGANRYIVNILGLSVIRELGPVLAAILVAGRSGS 247

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           AI A+IG M++ EE+DA+R MG+     ++ PR+ AL +++PLL +  N  A+ G ++  
Sbjct: 248 AITAQIGVMRVTEELDAMRVMGIPHGLRIVLPRVLALGVAMPLLVMWTNIVALSGGALAA 307

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
                I    F         +AN++ GL K       I +V    GF +  +S SLG+  
Sbjct: 308 KLALGIDVNFFIRSLPGVVPIANLWIGLGKGVVFGMLIALVGCHFGFRIKANSQSLGEGT 367

Query: 347 TTCVVQSISIVIIIDSLFAIFYFAIGI 373
           TT VV SI++VI+ D++FAI +  +G+
Sbjct: 368 TTSVVTSITVVILADAVFAILFQNVGL 394


>gi|323700846|ref|ZP_08112758.1| protein of unknown function DUF140 [Desulfovibrio sp. ND132]
 gi|323460778|gb|EGB16643.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans
           ND132]
          Length = 381

 Score =  259 bits (662), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 94/374 (25%), Positives = 175/374 (46%), Gaps = 14/374 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
            +G  V   +G   +   + +  + V   + S  S     D   +T +D  G  L++   
Sbjct: 19  RDGGLVLALSGRLDAAGTTAVWAEAVKGASGSGFSR-LTADCGGVTYMDGSGVALLLKLK 77

Query: 63  E---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
           E   +    I+L  +     +L  L             P++       + L   +G    
Sbjct: 78  ELCAEKKAAIELTNLREEDSRLVDL-------TWDTALPKQRDSERERRGLAEAVGAAGG 130

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           +  ++       +G   S  G         +     ++     VGV  + +++LI F+ G
Sbjct: 131 ELWHNVREMIAFVGESFSLLGRAAVHPGMVR--WKDVVLACINVGVESMFIIVLIGFLMG 188

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            +++ Q A  L +FG EIF  +++ ++  RE+G L+T++++A RSGSA  AEIG+MKINE
Sbjct: 189 LIMSFQSAISLQRFGGEIFVPNMLGLVMFREMGPLVTSILLAARSGSAFAAEIGTMKINE 248

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DA+ TMGL  +R L+ P++ A +  +PL+T+  N ++++G ++V+      P   F S
Sbjct: 249 ELDALTTMGLSPMRFLVVPKLLATMAMVPLMTMFFNLASLVGGALVM-LSMGYPLVTFTS 307

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           R  +  +  + + G+ K    +  +  V    G      ++++G   T+ VV  I ++  
Sbjct: 308 RVFANVSATDFWGGMAKGLVFSFLVAGVGCLRGMQTRSGASAVGLSTTSAVVSGIILIAF 367

Query: 360 IDSLFAIFYFAIGI 373
            D LFA+ Y+ +GI
Sbjct: 368 ADGLFAVAYYYLGI 381


>gi|311109431|ref|YP_003982284.1| hypothetical protein AXYL_06276 [Achromobacter xylosoxidans A8]
 gi|310764120|gb|ADP19569.1| hypothetical protein AXYL_06276 [Achromobacter xylosoxidans A8]
          Length = 354

 Score =  259 bits (661), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 97/365 (26%), Positives = 181/365 (49%), Gaps = 13/365 (3%)

Query: 11  FAGNWKSPEISEIADDVVMAINKSIQSDS-AIVDLSAITEIDTIGAELIMY-FMEKYHGK 68
            AG+W    ++E  +        +  +D  A  DL  I  +DTIGA LI   +  K   +
Sbjct: 1   MAGDWSVLALAEPGEVQRRREALACATDGGARWDLHGIGRLDTIGALLIWEAWGHKLPER 60

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
           ++    S   + +F+ ++    +       +  + +         +G+ I + I++  + 
Sbjct: 61  VRW---SAGQQDVFNALAMNKGETPAAAPKRDPWSWP------RAVGEAIFQAIDNGRAL 111

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             +LG ++ + G          G    +  Q+Y  G   + +  L+ F+ G V++   A 
Sbjct: 112 LVMLGQLVLDFGGMLRRPRL--GPWREISAQVYRTGAQALGITALVGFLIGVVLSYLSAQ 169

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           QL   GA+ F + L+ +  +RE+G +L A+++AGRSGSAI A+IG M++ +E+DA+  MG
Sbjct: 170 QLQMIGADRFIVRLLGVSIVRELGPVLAAILVAGRSGSAITAQIGVMRVTQELDAMLVMG 229

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +   + LI PR+ AL +++PLL +  +  AI+G  +       +    F        +L 
Sbjct: 230 ISHGQRLILPRVVALAVTMPLLVLWTDAMAILGGMLAAQMQLGVSAQWFLQSLPDAISLT 289

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           N + G++K       I ++A   G  +  ++ SLG+  TT VV SI+ VI++D+ +A+ +
Sbjct: 290 NYWIGILKGVTFGMLIALIACHFGLRIQPNTESLGRGTTTSVVTSITGVILLDAFYAVIF 349

Query: 369 FAIGI 373
            ++GI
Sbjct: 350 SSVGI 354


>gi|223936767|ref|ZP_03628677.1| protein of unknown function DUF140 [bacterium Ellin514]
 gi|223894618|gb|EEF61069.1| protein of unknown function DUF140 [bacterium Ellin514]
          Length = 384

 Score =  258 bits (660), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 96/371 (25%), Positives = 177/371 (47%), Gaps = 6/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E G      +G+WKS E+      V   ++      +   D+S +T   +    L+M   
Sbjct: 20  ETGKLQVVASGDWKSGEVFPDVGGVSNKLDVDESIRALSFDVSKVTSWSSGLIGLVMRCR 79

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           E    +     ++     L   +       +   + + +    +   +   IG  ++   
Sbjct: 80  ELAMERK----IAFDQSGLPQSVQRLIVLALAVPEKKDARSLQTRPGIFEKIGLGVLGLR 135

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                    +G              +++   + LI Q    G   +P+V LI+F+ GA++
Sbjct: 136 RSGEETLKFIGDCTIAFLALAKRKARYRWTEVWLIMQ--QCGPDALPIVALINFLVGAIL 193

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A  GA QLS+FGA I+  DL+ I  +RE+GV++ AV++ GR+G+A  A++G+MK+N+EID
Sbjct: 194 AFVGAVQLSKFGAAIYVADLVGIATMREMGVIMMAVIMCGRTGAAFAAQLGTMKVNQEID 253

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A +T+G+  +  L+ PRI  L +  P+L I A+  AI+G  +V     +  FA ++    
Sbjct: 254 AYKTLGISPIEFLVMPRIMCLWLMFPVLCIFADLMAIVGGGVVALAMLNFSFAEYWQETV 313

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           +  TL + F G++K+      + + +   G   G  + ++G   T+ VV  I++++I D+
Sbjct: 314 AAVTLTHFFIGIVKSFVFGVLVAMTSCLRGIQCGNDAAAVGLATTSAVVTGITVIVIADA 373

Query: 363 LFAIFYFAIGI 373
           +FA+     GI
Sbjct: 374 IFAVILNVFGI 384


>gi|254450464|ref|ZP_05063901.1| ABC transporter, inner membrane subunit [Octadecabacter antarcticus
           238]
 gi|198264870|gb|EDY89140.1| ABC transporter, inner membrane subunit [Octadecabacter antarcticus
           238]
          Length = 376

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 115/374 (30%), Positives = 186/374 (49%), Gaps = 14/374 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S +        G    P ++     +V   +      +    LS +T  DT  A  I   
Sbjct: 13  STDAAVTMTLRGAMTLPYVT----QIVAKFDTLPMDRTVRAYLSGVTRFDTSAAWAIASL 68

Query: 62  ---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
              +E     ++++G     E L   ++                           IG  +
Sbjct: 69  RTRLETAGQHLEIRGAGIGHESLLKSVTDAMPVITPAP-----VVAGGLIEWVAAIGSSM 123

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           V  +          GL +S          +F+  L +L+     VG   VP+V L++F+ 
Sbjct: 124 VDAVTFVLELIGYFGLFLSRLLRAIRHPKEFR--LTALVHHCQEVGFKAVPIVALMAFLI 181

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G V+A QG+ QL QFGAE+F +DL+++  LRE+G+LLT++++AGR+ SA  A IGSMK+ 
Sbjct: 182 GVVLAFQGSTQLKQFGAEVFIVDLIAVSILRELGILLTSIIVAGRTASAFTAAIGSMKMR 241

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+R++GLD    L  PRI AL++ LP+L ++AN   + G +I+ W    I   +F 
Sbjct: 242 EEIDAMRSLGLDPAATLFVPRILALVLMLPILGLIANVMGLFGGAIMAWIDLGISPEMFM 301

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +R  +   ++++  G+IKAP  A  IG+V    G  V  ++ SLG+  ++ VV +I  VI
Sbjct: 302 TRLVNGTDVSHLAAGMIKAPVFALIIGVVGCHAGMQVQSNAESLGRMTSSSVVAAIFAVI 361

Query: 359 IIDSLFAIFYFAIG 372
           + D++F+IF+  IG
Sbjct: 362 MADAVFSIFFAQIG 375


>gi|77920339|ref|YP_358154.1| ABC transporter permease [Pelobacter carbinolicus DSM 2380]
 gi|77546422|gb|ABA89984.1| ABC-type transport system, permease component [Pelobacter
           carbinolicus DSM 2380]
          Length = 386

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 102/375 (27%), Positives = 177/375 (47%), Gaps = 14/375 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           ++  I    FAG   +   + +   ++  +         +++   I   D  G  L M  
Sbjct: 23  NDAEILSLSFAGKLDAAATALLWKPLLE-LAHQTAPRLLLIEADQINYCDGAGIGLFMEL 81

Query: 62  MEKYHGKI---KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
             +   +    +L+G+     +L+SL        ++  +P           L   IG++ 
Sbjct: 82  ARQQQKRQQRFELKGLKEEFARLWSLYRPEDFMDLRGSRPHPCC-------LPEEIGRQA 134

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
                     A   G + S            +   + L+  M   GV+ +P+V LISF+ 
Sbjct: 135 CLAGQGIVDMARFTGELTSALLHAARHPRSVRWPEVWLV--MEKAGVNSLPIVGLISFLI 192

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G ++A Q    + QFG EI+  +L ++  LRE+G L+TA+++AGRS SA  AE+G+MKIN
Sbjct: 193 GLIMAFQATIPMRQFGVEIYVANLTALSMLRELGPLMTALLLAGRSSSAFAAELGTMKIN 252

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+ TMGL  +  L+  R+ A +I LPLL++ AN   +IG ++V+      P   + 
Sbjct: 253 EEIDALTTMGLAPIPFLVVTRVLATVIILPLLSLFANLMGLIGGAVVL-LSLGYPLVTYT 311

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           ++  +   L ++  GL+K    A  +  V    G      ++++G   T  VV  I +++
Sbjct: 312 NQVKAAVNLGDLTGGLVKTLVFALIVAGVGCLYGLKTRSGASAVGDSATRAVVSGIILIV 371

Query: 359 IIDSLFAIFYFAIGI 373
           + D LFA+ Y+ +GI
Sbjct: 372 VADGLFAVVYYFLGI 386


>gi|242278699|ref|YP_002990828.1| hypothetical protein Desal_1226 [Desulfovibrio salexigens DSM 2638]
 gi|242121593|gb|ACS79289.1| protein of unknown function DUF140 [Desulfovibrio salexigens DSM
           2638]
          Length = 371

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 96/371 (25%), Positives = 170/371 (45%), Gaps = 14/371 (3%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---M 62
            +    +G   +    E+ D    A+     +   +V+ S I  +D  GA L M      
Sbjct: 12  GSTMNISGRLDAEGAGEVWDKARAAVA----AGCLVVECSGIEYLDGGGASLFMMMKAGC 67

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                 + + G+         L           Q  ++       +     +G+      
Sbjct: 68  RDRGSSLVINGLRPEFASFLELFDLDKAAPPSGQVKRK----GGIRGWITSVGQSGQAVA 123

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
            D   Q    G  +        ++ K K            VG  G+P+++LI F+ G ++
Sbjct: 124 ADMREQIEFTGNCV--LASLSTATLKNKLRWPDFWLTCEKVGADGLPIILLIGFLMGLIM 181

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           + Q A  L +FGAEIF  +++ ++  RE+G ++TA+++AGR+GSA  AEIG+MK+NEE+D
Sbjct: 182 SFQSAVSLMRFGAEIFVPNMLGLVMFRELGPMVTAILLAGRTGSAFAAEIGTMKVNEELD 241

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+ TMGL+ V  L+ PR+ A +   PLLT+  NF +++G ++V+      P A +  R  
Sbjct: 242 ALNTMGLNPVSFLVLPRVLATVCMTPLLTLFFNFMSLVGGALVM-LSMGYPLATYCGRVF 300

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
                 +   G+IKA   +  +  +  + G      ++++G   T+ VV  I ++ + D 
Sbjct: 301 ENVQWMDFSGGMIKAVVFSFLVAGIGCQRGLVTKSGASAVGDSTTSAVVSGIILIAVFDG 360

Query: 363 LFAIFYFAIGI 373
           +FA+ +F  GI
Sbjct: 361 IFAVIFFLTGI 371


>gi|157165030|ref|YP_001466748.1| MTA/SAH nucleosidase [Campylobacter concisus 13826]
 gi|112799982|gb|EAT97326.1| ABC transport system permease [Campylobacter concisus 13826]
          Length = 368

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 108/375 (28%), Positives = 183/375 (48%), Gaps = 20/375 (5%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQS--DSAIVDLSAITEIDTIGAELIM 59
             NG    +FAG +   +   +      +I K IQ    +   D S +  ID     +++
Sbjct: 11  EANGTATIKFAGEFSYKDAKNL-----QSIFKKIQKLKGNVKFDFSELKSIDYA---VLI 62

Query: 60  YFMEKYHGK-IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
                 +GK  ++      I+ +  L++   +   K   P  S       N    +G+KI
Sbjct: 63  LLKNTLNGKKFEIITNDEKIKAMSDLLND-EKIDFKYMPPHNS------LNFFSRLGEKI 115

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
            +   +       LG  +  +     +    +         +   GV+ V +V L +F+ 
Sbjct: 116 CEGFVNLLEFGSFLGEFLIKSVRILFNPANLR--FREFSNYIKDGGVNAVFIVSLTAFLI 173

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G V+A  G+  L+ FGA IF +++M +L LRE+  L+ A+++AGRS S+  A+IG+MK+ 
Sbjct: 174 GVVLAYLGSAMLASFGASIFIVEIMGMLTLREVAPLIAAIVVAGRSASSFTAQIGAMKLT 233

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA++TMG +    L+ PRI A+++ +P++  +A+  +I+G  I+     DI F+ + 
Sbjct: 234 EEIDAMKTMGFEPFNFLVLPRIIAMVLCVPVIIFIADSISILGQMIICQTILDISFSDYL 293

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +RF     L +   G+IKAPF    I I+    GF V  ++ SLG   T  VV +I  VI
Sbjct: 294 NRFREMVELRHFAVGMIKAPFFGAVIAIIGCMRGFGVSQNAQSLGAMTTVSVVNAIFWVI 353

Query: 359 IIDSLFAIFYFAIGI 373
            +D+ FAI +  + I
Sbjct: 354 ALDAFFAIIFMWLKI 368


>gi|224437093|ref|ZP_03658074.1| hypothetical protein HcinC1_03955 [Helicobacter cinaedi CCUG 18818]
 gi|313143563|ref|ZP_07805756.1| ABC transport system permease [Helicobacter cinaedi CCUG 18818]
 gi|313128594|gb|EFR46211.1| ABC transport system permease [Helicobacter cinaedi CCUG 18818]
          Length = 367

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 176/370 (47%), Gaps = 11/370 (2%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G  + +F G   + + S               ++   +D   IT++D +    I   +E
Sbjct: 9   SGRMLIKFQG---ACDYSLDKKSKDFLSKLISANERITLDFLEITKVDFVFCAFIYGLLE 65

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
                 ++    + ++++F  +  +  K   ++    S FY +  +     GK   +   
Sbjct: 66  --GKDYEILNADSQVKEIFQSMVESLPKLENSKSKSHSMFYGALFDF----GKFCERSYQ 119

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
            S    +  G+        C +   FK  L S++  +   G   +PV +L +F+    IA
Sbjct: 120 SSLDFLNFFGMCSFYFFRSCWNLRHFK--LGSIMYHINESGFKALPVALLTAFIVSYAIA 177

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
            QG  QL + G  + S+++++ L LRE+G  + A++IAGRS S+  A+IG M + EE DA
Sbjct: 178 LQGVLQLEKMGVPLMSVEIVAKLSLREMGPFILAIVIAGRSSSSFAAQIGVMNLTEENDA 237

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           ++TM L     +I PRI AL+I +PLL  LA+  ++    + I     + F  +  RF+ 
Sbjct: 238 LKTMNLSLFDYIILPRILALVIIMPLLVFLADAVSLFACFLAINMQTGLDFMQYLERFYE 297

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              + N + G+IKAPF   A+ +V    G  V   + S+G + T  VV +I  VI+I+++
Sbjct: 298 YVGINNFWVGVIKAPFFGAAVALVGCFRGLYVKGDTESVGIETTKSVVNAIFWVILINAI 357

Query: 364 FAIFYFAIGI 373
           F+I    + I
Sbjct: 358 FSIITTGLNI 367


>gi|325527206|gb|EGD04595.1| putative ABC transporter permease [Burkholderia sp. TJI49]
          Length = 351

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 100/361 (27%), Positives = 171/361 (47%), Gaps = 11/361 (3%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72
           G W +  ++     VV           +  DLS I  +D +G + +     +  G+    
Sbjct: 1   GQWTALALARNRGAVVRRAESVATGRVSEWDLSGIGRLDHVGGQALW----RVWGRKLPA 56

Query: 73  GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHIL 132
           G++    Q  ++     R   + + P+R    +    L    G  +  F         + 
Sbjct: 57  GIALTATQ-RTIFERIERLDSQREAPERIVRVDPVTRL----GLMLFAFAEHLQGGIAMF 111

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G VI +                     +Y  G   +P+  L++F+ G V++   A QL  
Sbjct: 112 GRVILDALSVLRRPQTMP--WKETSANIYSAGTQALPITALVAFLIGIVLSYLSAQQLQM 169

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
           FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R MG+   
Sbjct: 170 FGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVMGIPHG 229

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
             LI PR+ AL I++PLL +  N  A+ G ++       I    F         +AN++ 
Sbjct: 230 LRLILPRVLALGIAMPLLVMWTNIIALTGGALAAKLVLGIDVNYFVRSLPGVVPIANLYI 289

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           G+ K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI +  +G
Sbjct: 290 GIGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAILFQNVG 349

Query: 373 I 373
           +
Sbjct: 350 L 350


>gi|73539807|ref|YP_294327.1| hypothetical protein Reut_A0101 [Ralstonia eutropha JMP134]
 gi|72117220|gb|AAZ59483.1| Protein of unknown function DUF140 [Ralstonia eutropha JMP134]
          Length = 357

 Score =  255 bits (653), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 179/367 (48%), Gaps = 16/367 (4%)

Query: 11  FAGNWKSPEIS--EIADDVVMAINKSIQS-DSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             G+W +  ++    A  +   +++  Q+ D A   L+ + ++D IG +L+    + + G
Sbjct: 3   LCGDWTALGLAGCHQARAMRSRLHELCQTPDDAHWSLAGVDKLDHIGGQLLW---QAWDG 59

Query: 68  KIKLQ-GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
           K+  +   S    ++F  I+  H    +    +R        N     G  ++ F   + 
Sbjct: 60  KLPQRLDASEGQRRVFERIADLHADGWRKHIVERF-------NPITLFGASVLSFCAQAA 112

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +   +LG +  +   F       +G    +   +Y +G   + +  L+ F+ G V++   
Sbjct: 113 NGVSMLGQLTFDLIRFARMPQ--RGPWREISANIYNIGYKALGITALVGFLIGIVLSYLS 170

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A QL  FGA  F ++++ +  +RE+G +L A+++AGRSGSAI A+IG M++ EE+DA+R 
Sbjct: 171 ANQLRTFGASTFIVNILGMAVIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELDAMRV 230

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG+     LI PR+ AL + +PLL    +  A+ G  I       I    F         
Sbjct: 231 MGISHGFRLIMPRVIALAVCMPLLVAWTDVLALAGGIIAARMQLGISPTFFLRALPDAVP 290

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           +AN++ GL K       IG+ A   G  +  ++ SLG+  T  VV SI+IVI+ D++FA+
Sbjct: 291 VANLWLGLGKGVAFGILIGLAACHFGLRIKPNTQSLGEGTTASVVVSITIVIVADAIFAV 350

Query: 367 FYFAIGI 373
            +  +G+
Sbjct: 351 MFKDVGL 357


>gi|183220168|ref|YP_001838164.1| ABC transporter permease [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189910288|ref|YP_001961843.1| ABC transporter membrane protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167774964|gb|ABZ93265.1| Membrane protein of an ABC transporter complex [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167778590|gb|ABZ96888.1| ABC-type transport system, permease [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
          Length = 374

 Score =  255 bits (652), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 92/337 (27%), Positives = 167/337 (49%), Gaps = 8/337 (2%)

Query: 37  SDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96
             + I+  + + E DT G   +    +    + + + +   + +L     +       + 
Sbjct: 46  PRNIIIFANQLKETDTSGISFL----KLIRTECESRNIHFVLRELNDKFQYRLNITNDDS 101

Query: 97  KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156
           K        S +     IGK  +  + +        G +  +         K +      
Sbjct: 102 KKYNEQLAVSLRK-SEQIGKLTIDSLLEFKYLITFTGELTVSFWRSFLHPSKIR--WKDS 158

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
            R    +GV+  P++ +I F+ G +++ Q A  + +FGAEIF  +L+ +   RE+G L+T
Sbjct: 159 FRVAESMGVNAFPIIAMIGFLLGLIMSFQSAIPMRRFGAEIFVANLVGLSLFRELGPLMT 218

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A +++GRSGS+  AE+G+MK++EEIDA+ TMGL  V+ LI PR+ A +I  PLLTI+ N 
Sbjct: 219 AFILSGRSGSSFAAELGTMKVSEEIDALTTMGLPPVQFLIIPRLVASLIVTPLLTIVFNL 278

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
             +IG ++V+  +   P   F ++ +    L++I  GL+K+ F    I  +    G    
Sbjct: 279 FGLIGGAVVLVSF-GFPLITFVNQVNIAVGLSDILGGLLKSYFFGMIIASIGCYRGLKTA 337

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
             + ++G+  T+ VV SI +V I+D +F++ +F + I
Sbjct: 338 SGAGAVGESTTSAVVGSIILVSILDGIFSVLFFYLRI 374


>gi|237752254|ref|ZP_04582734.1| toluene ABC transporter permease [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229376496|gb|EEO26587.1| toluene ABC transporter permease [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 373

 Score =  254 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 98/358 (27%), Positives = 169/358 (47%), Gaps = 14/358 (3%)

Query: 16  KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVS 75
               +  + D +  +  K      A  D      +D  G E+++ ++E       ++   
Sbjct: 28  TLNALYTLLDTLKKSPQKVRIQKDASFD------LDFCGGEVLINWLEHLSECCTIENTL 81

Query: 76  THIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND-SCSQAHILGL 134
               +   + +    K    +K        + K+        I+K            LG 
Sbjct: 82  LEHSKTAEIFAILQSKTTLEKKEFTQDVIQAHKDTLE-----ILKVWGSRLVITLSFLGE 136

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
           ++        +   F+  + +L  Q+    +  VP++ L  F+ G VIA QG+ QL QFG
Sbjct: 137 IVYLLYHSVLNPRDFR--IRALFFQIQEAVIKAVPIISLACFLIGIVIAYQGSLQLRQFG 194

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
           A +  +++ ++L LRE+  ++ A+++AGRS SA  AEIG M+  +EIDA+R MG + V  
Sbjct: 195 ASVLIVEMSAMLTLREMAPIIVAIIVAGRSASAFSAEIGMMRATQEIDAMRVMGFNPVTF 254

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           LI PRI+AL+ +LPL+  +A+   ++G  ++      I    F  RF  T  + + + G+
Sbjct: 255 LIFPRIFALLFALPLVVFVADMFGLLGGMLISQLQLGISSEHFIERFLQTVEMRHFWIGM 314

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           +KAPF    IG++    GFA    + S+G   T  VV+SI  VI  D+L ++ +  IG
Sbjct: 315 LKAPFFGLIIGLIGCYHGFATQKDTRSIGVHTTKSVVESIFCVIAFDALCSVLFTQIG 372


>gi|254000132|ref|YP_003052195.1| hypothetical protein Msip34_2431 [Methylovorus sp. SIP3-4]
 gi|313202095|ref|YP_004040753.1| hypothetical protein MPQ_2372 [Methylovorus sp. MP688]
 gi|253986811|gb|ACT51668.1| protein of unknown function DUF140 [Methylovorus sp. SIP3-4]
 gi|312441411|gb|ADQ85517.1| conserved hypothetical protein [Methylovorus sp. MP688]
          Length = 371

 Score =  254 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 93/370 (25%), Positives = 168/370 (45%), Gaps = 13/370 (3%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G    R  G W    +     ++  A+           DL A  ++DT GA ++   +  
Sbjct: 14  GRRRVRLLGQWSLRALDNDFAELKQALQPFFSDPFTQWDLLATEQLDTAGATIL---LNG 70

Query: 65  YHGKIKLQ-GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           + GK+  +  V+     LF+ +            P R+     +       G+ ++KF  
Sbjct: 71  WEGKLDARMQVTEEQRALFTTLQGLR-------VPARTGSQFDWAFPLVATGELVMKFAQ 123

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                  ++GL++            F       +  +Y  GV+ +PV  L+ F+ G  ++
Sbjct: 124 HLTDFVQLIGLLLLEMLYLVRRPSAFP--WREFMANIYKSGVTALPVTGLLGFMIGVAMS 181

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
              + QL  FGA+IF ++++ +  +RE+G +L A+++AGRSGSA+ A+IG M++ EEIDA
Sbjct: 182 YLMSSQLRTFGADIFIVNILGLSMIRELGPILMAILVAGRSGSAMTAQIGVMRVTEEIDA 241

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           + TMG+  +  ++ P++  L    P L +  +F  + G ++       + F  FF     
Sbjct: 242 LTTMGVSRILRIVLPKVLGLTFVAPFLVLWTSFWGLAGGALSANTELGLSFRFFFDYLPM 301

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                N+   L K       + +VA   G  +  ++ SL    T+ VV +I+ VI++D+ 
Sbjct: 302 VVEPVNLTLSLFKGLLFGFVVTLVACHFGLRIMPNTESLSASTTSSVVTAITSVILLDAA 361

Query: 364 FAIFYFAIGI 373
           FAI    IG+
Sbjct: 362 FAILTSGIGV 371


>gi|297569477|ref|YP_003690821.1| protein of unknown function DUF140 [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925392|gb|ADH86202.1| protein of unknown function DUF140 [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 368

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 91/364 (25%), Positives = 176/364 (48%), Gaps = 14/364 (3%)

Query: 11  FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-YFMEKYHGKI 69
            AG+W   E++     +   +  +     A   L  +  +D+ GA L+  ++   +   +
Sbjct: 16  LAGSWTLGELARHLAAIRPQLQATPAG--ASWSLREVERLDSFGAMLLWQHWGRSWPKNL 73

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
           ++   +  +  + + ++    + +            +       +G  +  F+  +    
Sbjct: 74  EI---NDELRGVIAAVAAHSGRPLPRP------HRFTLLEALVLLGSMLFTFLGHARDLV 124

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
            +LG ++ +         ++   L  L   MY VGV  +PV  L+ F+ G V++   A Q
Sbjct: 125 TLLGQLLLDLLFLVRHPRQWP--LRELSANMYKVGVKAMPVAALVGFLIGVVLSYLSAMQ 182

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L  FG E++ ID++ +  +RE+G +L A+++AGRSGSA+ A++G M++ EEIDA+  MG+
Sbjct: 183 LEAFGVEVYLIDILGLGIIRELGPVLVAILVAGRSGSAMTAQLGVMRVTEEIDALAAMGI 242

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
                L+ P++ AL + +PLL +  +  A++G  +       I FA F  +      +AN
Sbjct: 243 SRTIRLVLPKVLALTLVMPLLVLWTSAVALLGGMLSANMQLGISFAFFMEKLPQVVPIAN 302

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           ++ GL K       I +VA   G  +  ++ SL    T  VV +I+ VI++D++FA+   
Sbjct: 303 LYIGLGKGAVFGLLIALVACHFGLRIRPNTESLAAHTTASVVTAITTVILVDAVFAVMLR 362

Query: 370 AIGI 373
            +G+
Sbjct: 363 NVGV 366


>gi|218961389|ref|YP_001741164.1| transporter, putative (modular protein) [Candidatus Cloacamonas
           acidaminovorans]
 gi|167730046|emb|CAO80958.1| transporter, putative (modular protein) [Candidatus Cloacamonas
           acidaminovorans]
          Length = 358

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 102/366 (27%), Positives = 176/366 (48%), Gaps = 20/366 (5%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           +    G+  +  + E   +V   +          +DLS I  +D+ G   +     +   
Sbjct: 9   ILYLEGSLNAETVPETFIEVNSLLKHQ---SPNTIDLSNINVLDSAGVAFLDELNTRLSA 65

Query: 68  K--IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
           +  +  QG +  I+++    S     KIK   P+R             IG  +V    + 
Sbjct: 66  EGILLFQGATPEIQEVIDSFSSL---KIKVPAPERKM------GFFEKIGDSLVLAGQNF 116

Query: 126 CSQAHILGLVI--SNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
            +   +   V   +  G F     +   F +    Q   +G   +P++ L+SF+ G +++
Sbjct: 117 YNVMLLASEVFYWAVIGIFSRKGQRKGSFTI----QCSLLGSQALPILSLLSFIVGFILS 172

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
            Q + QL+ FGA +F  DLM+   +REI  L+TA+++AGRSGSAI +EI +M++ EEIDA
Sbjct: 173 LQASVQLANFGANVFIADLMAFAMVREIAPLITAIIVAGRSGSAIASEIATMQVTEEIDA 232

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           ++TM L  VR ++ P+  A+ + +P+L + +   + IG  ++   Y D+    F  R  +
Sbjct: 233 LKTMALSPVRYVVVPKFHAITVVMPILVMFSILVSEIGGGLIAIDYLDLSVYTFVQRSIN 292

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             TL ++ T   K+   A  I I+    GF V   +  +GK  T+ VV SI  VII D++
Sbjct: 293 VLTLKDLVTSFGKSVIFAWTIVIIGAYCGFQVKGGAEGVGKATTSSVVASIFAVIIWDAI 352

Query: 364 FAIFYF 369
           F++ Y 
Sbjct: 353 FSLLYL 358


>gi|298530716|ref|ZP_07018118.1| protein of unknown function DUF140 [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298510090|gb|EFI33994.1| protein of unknown function DUF140 [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 256

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 79/263 (30%), Positives = 140/263 (53%), Gaps = 7/263 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
            K++   +G + + F+ +      +    +          ++ + F     +QM ++GV+
Sbjct: 1   MKSILGWLGHQTLGFLQELGRIMVLF---LQALSWLVRPPFRIRLFF----KQMEFIGVN 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + VV L S  TG V+A Q  +  S FGAE      +++   RE+G ++T +M+ GR+GS
Sbjct: 54  SLFVVALTSLFTGMVLALQTFYAFSMFGAETLVGATVALSMTRELGPVITGLMVTGRAGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           AI AEIG+M++ E++DA+  M ++ V+ L+ PRI A +I LPLLTI++N   I+G  +V 
Sbjct: 114 AICAEIGTMRVTEQVDALTVMAINPVQYLVLPRIVAGVIMLPLLTIISNTMGILGGYLVG 173

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
            +  DI   +F ++     T+A+++ GLIKA      + +V   +GF     +  +G+  
Sbjct: 174 VQLLDIHGGMFLNKIQEHVTMADVYNGLIKASAFGGILTLVGCYKGFYTRGGAEGVGRST 233

Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369
           T  VV S  ++++ D       F
Sbjct: 234 TQAVVMSSVLILVSDYFLTALMF 256


>gi|313672871|ref|YP_004050982.1| hypothetical protein Calni_0908 [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312939627|gb|ADR18819.1| protein of unknown function DUF140 [Calditerrivibrio nitroreducens
           DSM 19672]
          Length = 256

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 77/248 (31%), Positives = 136/248 (54%), Gaps = 4/248 (1%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           +N +     I  L+I +        +++K     LI+QM ++G + + V+IL    TG V
Sbjct: 13  LNLALESGRIFLLLIDSILWIFRPPFRWKL----LIKQMEFIGANSISVIILTGTFTGMV 68

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
            A Q      +FGAE     ++ +   RE+G +L+A+M+A R+GSAI AEIG+MK+ E+I
Sbjct: 69  FAFQSYIGFHKFGAEYMVGTVVGLGMARELGPVLSAIMVAARAGSAITAEIGTMKVTEQI 128

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+ ++ +D V+ L++PRI A ++ +PLL  +A F  ++G   V  K  DI   ++    
Sbjct: 129 DALHSLAVDPVQYLVTPRILAGLLVMPLLNSIAVFCGVLGGYFVGVKILDINRTLYLQYM 188

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           +    L++++ G+IK+      + +V   +G AV   +  +G+  T  VV S  ++++ D
Sbjct: 189 YQYVDLSDLYNGMIKSVVFGLILTLVGCYKGMAVSGGAEGVGRATTESVVLSCILILVFD 248

Query: 362 SLFAIFYF 369
            +   F F
Sbjct: 249 YILTAFMF 256


>gi|237751540|ref|ZP_04582020.1| ABC transport system permease [Helicobacter bilis ATCC 43879]
 gi|229372906|gb|EEO23297.1| ABC transport system permease [Helicobacter bilis ATCC 43879]
          Length = 387

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 90/271 (33%), Positives = 144/271 (53%), Gaps = 2/271 (0%)

Query: 98  PQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLI 157
           P R    N F +    IG+  V F   + S  + +G+ +      C     F+    SLI
Sbjct: 114 PYRPKRLNIFSSFFSFIGQWCVSFYQTALSFFNFMGMFLHFFMLGCLKPSNFR--FKSLI 171

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
             +Y  G   +PV ++ S + G  I  QGA+QL+  G  I S+D  + L LRE+G  + A
Sbjct: 172 YHIYEQGFKALPVGLMTSLIIGYAITLQGAYQLNSMGVPIMSVDTTAKLALREMGPFILA 231

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++IAGRS S+  A++GSM++ EE+ A++ M L+    LI PRI ALII +PL+   A+  
Sbjct: 232 LVIAGRSASSFTAQLGSMRLTEELSAMKAMNLNIFYFLIIPRILALIIVMPLMVFAADAI 291

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           A+ G  + I    +I F  +  RF+ T ++ + + G++KAP     IGIV    G     
Sbjct: 292 ALFGGMVAIKTSINIGFETYLERFYETVSITHFWIGVVKAPVFGAIIGIVGCFRGLECRG 351

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
            + S+GK  T  VV +I  +I+ +++F+  +
Sbjct: 352 DTQSIGKMTTMSVVNAIFWIIMANAIFSFIF 382


>gi|209521691|ref|ZP_03270381.1| protein of unknown function DUF140 [Burkholderia sp. H160]
 gi|209497882|gb|EDZ98047.1| protein of unknown function DUF140 [Burkholderia sp. H160]
          Length = 388

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 97/370 (26%), Positives = 174/370 (47%), Gaps = 16/370 (4%)

Query: 8   VFRFAGNWKSPEISEIADD---VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-FME 63
           + R +G W +  ++   +    + +    +        DLS +  +D +G + +   +  
Sbjct: 31  IVRLSGQWTALALARDRETGHVIPLLRALTGAQGIGEWDLSGVDRMDHVGGQALWRVWGR 90

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           K      L      I +  +L+           +           +    +G  I  F++
Sbjct: 91  KMPPGTALTDTQRDIFERIALLDTVRESAEPVSR----------IDPFTRLGLGIFSFLD 140

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                  +LG V+ +                 +   +Y  G   +P+  L++F+ G V++
Sbjct: 141 HMQGGVTMLGRVVLDLLAIARKPKL--TPWTEISANIYNAGARALPITALVAFLIGIVLS 198

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
              A QL  FGA  F ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA
Sbjct: 199 YLSAQQLRIFGANQFIVNILGLAVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDA 258

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R MG+     LI PR+ AL +++PLL +  N  ++ G ++       I  + F  +  S
Sbjct: 259 MRVMGIPHGLRLILPRVVALAVAMPLLVMWTNVISLTGGALAAKLVLGIEMSFFARQLPS 318

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              +AN++ GL K       I I     GF +  +S SLG+  TT VV SI+IVI+ D++
Sbjct: 319 VVPIANLWIGLGKGAVFGMLIAIAGCHFGFRIKANSQSLGEGTTTSVVTSITIVILADAV 378

Query: 364 FAIFYFAIGI 373
           FAI +  +G+
Sbjct: 379 FAILFQNVGL 388


>gi|205355658|ref|ZP_03222428.1| putative ABC transport system permease protein [Campylobacter
           jejuni subsp. jejuni CG8421]
 gi|205346435|gb|EDZ33068.1| putative ABC transport system permease protein [Campylobacter
           jejuni subsp. jejuni CG8421]
          Length = 337

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 100/332 (30%), Positives = 164/332 (49%), Gaps = 13/332 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
                G W    I ++     +A+   IQS   I D   +  IDT G    +     ++ 
Sbjct: 11  TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKD 67

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
            + KI  +G+++  + LF L    +++  K +K  ++F           +GK  ++ +  
Sbjct: 68  KNIKIAKEGLNSRFQTLFELCEKNYQRLSKTKKSHKNFS-----EYFIDLGKLSLELLKI 122

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                +  G   ++      +   F+   ++ +  +       +P+VIL + + G V+A 
Sbjct: 123 LRKFINFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q A+QL+QFGA IF +DLM I   RE+  L+ A++IAGRS S+  A+IG MKI +EI A+
Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            TMG      +I PR+ AL+I++PL+  +++  +IIG  +V     DI FA F   F   
Sbjct: 241 NTMGFRSFEFIIIPRVMALVIAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRHFREA 300

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
             + +IF GL KAP     IG++A   GF V 
Sbjct: 301 VDIKHIFIGLAKAPIFGFLIGLIACFRGFEVK 332


>gi|239907930|ref|YP_002954671.1| putative ABC transporter permease protein [Desulfovibrio magneticus
           RS-1]
 gi|239797796|dbj|BAH76785.1| putative ABC transporter permease protein [Desulfovibrio magneticus
           RS-1]
          Length = 384

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 89/376 (23%), Positives = 176/376 (46%), Gaps = 12/376 (3%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG---AEL 57
           ++  G+    F+G+W+  +     + V  A+  S      ++    +T  D++       
Sbjct: 18  VASGGVVTLTFSGSWRMDQTLPDIEAVRQALAASPAPQKLVLAGEGVTGWDSLFLTQCRA 77

Query: 58  IMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
           I+    +    +    +   +E L +L +    ++   +  +R+ F     ++ Y   + 
Sbjct: 78  IIALARERGVAVDAGALPPGVESLLALAAKVPERQGAARAAKRTPFLERMADMGYGAAQG 137

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +   ++ +         +++    F  S          L   +Y   +  + +V LISF+
Sbjct: 138 VRNLLDFTGDVTLAAWALVTGRAVFQRS---------QLTTLIYQASIDALGIVSLISFL 188

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G ++A  GA QLSQFGA+I+   ++ I  +R +G ++T +++AGR+G+A  AE+G+M++
Sbjct: 189 VGLILAFVGAIQLSQFGAQIYVSTIVGIAMVRVMGAIMTGIIMAGRTGAAYAAELGTMQV 248

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
           NEEIDA+RT G    + L+ PR+ AL++ +PLL I A+   I+G  +V      I    +
Sbjct: 249 NEEIDALRTFGFSPTQFLVLPRMIALVLMMPLLCIYADLMGIMGGFVVGVFMLKINPIQY 308

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            +    +  LAN + GL+ +      + +     G   G  +  +G+  T  VV SI  +
Sbjct: 309 LTHTWQSVPLANFWIGLVHSTVFGVLVAMAGCYRGMRCGRSALGVGQATTAAVVTSILAI 368

Query: 358 IIIDSLFAIFYFAIGI 373
           +I  ++  +    IG+
Sbjct: 369 VIATAILTVCCNIIGV 384


>gi|258404804|ref|YP_003197546.1| hypothetical protein Dret_0676 [Desulfohalobium retbaense DSM 5692]
 gi|257797031|gb|ACV67968.1| protein of unknown function DUF140 [Desulfohalobium retbaense DSM
           5692]
          Length = 256

 Score =  252 bits (645), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 77/263 (29%), Positives = 138/263 (52%), Gaps = 7/263 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
              L   +G   ++ +      A +LG   S  G      ++ + F     +QM +VGV 
Sbjct: 1   MLQLFGALGAGTMRGLQQMGQMALLLG---SACGWLLRRPFRIRLFF----KQMEFVGVH 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
              VVIL    TG V+A Q  +    F AE      +++   RE+G ++TA+M+ GR+GS
Sbjct: 54  SGFVVILTGLFTGMVLALQTYYAFRMFSAESLVGATVALSMTRELGPVITALMVTGRAGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG+M++ E++DA+  M ++ V+ L++PR+ A ++ LPLLT++++F  I G  +V 
Sbjct: 114 AMAAEIGTMRVTEQVDALEVMAINPVQYLVTPRLLAGMVMLPLLTVISDFVGIAGGYLVG 173

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
            K   I  ++F ++ +    L++I+ GL KA      + +V   +GF     +  +G+  
Sbjct: 174 VKMLGINSSMFMNKIYDLLELSDIYNGLTKAVVFGLILTLVGCYKGFYTSGGAEGVGRST 233

Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369
           T  VV +  ++++ D +     F
Sbjct: 234 TQAVVLASVLILMSDYILTALMF 256


>gi|307728301|ref|YP_003905525.1| hypothetical protein BC1003_0230 [Burkholderia sp. CCGE1003]
 gi|307582836|gb|ADN56234.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1003]
          Length = 389

 Score =  252 bits (643), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 97/370 (26%), Positives = 169/370 (45%), Gaps = 16/370 (4%)

Query: 8   VFRFAGNWKSPEISEIADD---VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-FME 63
           + R +G W +  ++        +    +          DLS I  +D +G + +   +  
Sbjct: 31  IVRLSGQWTALALARDRATGHVIPQLRSLEGAEGIGQWDLSRIDRMDHVGGQALWRVWGH 90

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           +     +L      I +  +L+           +                +G  I  F  
Sbjct: 91  RMPPDTELTATQRDIFERIALLDTVRETAEPVVRFDP----------LTRLGLGIFSFFE 140

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                  +LG V+ +                 +   +Y  G   +P+  L++F+ G V++
Sbjct: 141 HLYGGVAMLGRVVLDLLAIARKPAI--TPWTEISANIYNAGTRALPITALVAFLIGIVLS 198

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
              A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA
Sbjct: 199 YLSAQQLRLFGANQYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDA 258

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R MG+     LI PR+ AL +++PLL +  N  A+ G ++       I  + F      
Sbjct: 259 MRVMGIPHGLRLILPRVVALGVAMPLLVMWTNIIALTGGAVAAKIVLGIDMSYFARALPG 318

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              +AN++ GL K       I IV    GF +  +S SLG+  TT VV SI+IVI+ D++
Sbjct: 319 VVPVANLWIGLGKGVAFGMLIAIVGCHFGFRIKANSQSLGEGTTTSVVTSITIVILADAV 378

Query: 364 FAIFYFAIGI 373
           FAI +  +G+
Sbjct: 379 FAILFQNVGL 388


>gi|116749843|ref|YP_846530.1| hypothetical protein Sfum_2414 [Syntrophobacter fumaroxidans MPOB]
 gi|116698907|gb|ABK18095.1| protein of unknown function DUF140 [Syntrophobacter fumaroxidans
           MPOB]
          Length = 384

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 88/374 (23%), Positives = 165/374 (44%), Gaps = 12/374 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
              + +    GNW+  +     D ++       +      D   + E D+     ++  +
Sbjct: 20  REDVLLVGLRGNWRIADEPIPVDAIIREFESDPRIRILAFDTGELGEWDSSLLTFLIKVI 79

Query: 63  E---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
           +   +   +    G+   + +L SL S         ++  +  F          +G + +
Sbjct: 80  DTGVRRGLEADRTGLPEGVGRLLSLASAVPEATDARRQEAKQPF-------LTRVGTQAI 132

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                       LG       +      + +   L  + Q    G   +P+V LIS + G
Sbjct: 133 SLAAAVGQMMEFLGEAAIAFFQLVRGRARLRRVDLMTLIQ--DCGADALPIVSLISVLVG 190

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            ++A  GA QL  FGA+I+  DL+ +   RE+G ++TAV++AGR+G+A  A++G+M++NE
Sbjct: 191 LILAFVGAVQLRMFGAQIYVADLVGLGMAREMGAMMTAVIMAGRTGAAFAAQLGTMQVNE 250

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDA++T+G+  +  L+ PR+ AL++ +P L + A+   I+G  IV      +    ++ 
Sbjct: 251 EIDALQTLGVSPMEFLVLPRMLALVLMMPFLCLYADLMGILGGGIVGVGMLGLSPLEYYH 310

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                  L +   GLIK       I +     G   G  S ++G   T+ VV  I  +++
Sbjct: 311 ETVQAVGLMDFGAGLIKGAVFGVLIALSGCLRGMQCGRSSAAVGLATTSAVVTGIVAIVV 370

Query: 360 IDSLFAIFYFAIGI 373
            D++  + Y  +GI
Sbjct: 371 SDAILTVIYDRLGI 384


>gi|53802513|ref|YP_112711.1| ABC transporter permease [Methylococcus capsulatus str. Bath]
 gi|53756274|gb|AAU90565.1| putative ABC transporter, permease protein [Methylococcus
           capsulatus str. Bath]
          Length = 406

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 91/371 (24%), Positives = 178/371 (47%), Gaps = 13/371 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E+G  V    G+W    +   + D+   + ++ +      DL  +  +D+ GA ++    
Sbjct: 48  EDGTAVVH--GHWNLRGLIAASPDLRERLCRAARRPDLEWDLRGVNVLDSAGAFVLW--- 102

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            +  G+   + ++   EQ         R+      P           +   I   I    
Sbjct: 103 -QAWGERLPERIALRHEQ-----QSAFRRWQTGGIPAVRDGRRPPVPIRRRIIAAIAGLG 156

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +   +   +LG +I +                 +   ++  G   + +  L+ F+ G V+
Sbjct: 157 SHLLAVLALLGQLILDLAHLARHPADIP--WREISATIHETGGRALGITALVGFLIGVVV 214

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           +   + QL  FGA+++ ++++ +  +RE+G LL A+++AGRSGS++ A IG M++ +E+D
Sbjct: 215 SYLSSLQLKTFGAQVYIVNILGMSIIRELGPLLAAILVAGRSGSSMTARIGVMRVTQELD 274

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  MG+     LI P++ AL+++LPLL +  +  A+ G ++      +I +  FF +  
Sbjct: 275 ALAAMGISQSLRLILPKVVALVVALPLLVVWTDVVALAGGAVSAHLELEIGYHQFFQKLP 334

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           S   +AN   GL KA      + ++A   G  +  ++ SLG + T  VV SI++VI++D+
Sbjct: 335 SAVPVANFAIGLGKAAVFGLFVALIACHYGLRIAPNTESLGNETTNSVVVSITLVILVDA 394

Query: 363 LFAIFYFAIGI 373
           +FAI + ++GI
Sbjct: 395 VFAILFRSVGI 405


>gi|293602529|ref|ZP_06684975.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Achromobacter piechaudii ATCC 43553]
 gi|292819291|gb|EFF78326.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Achromobacter piechaudii ATCC 43553]
          Length = 383

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 98/368 (26%), Positives = 181/368 (49%), Gaps = 13/368 (3%)

Query: 8   VFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-FMEKY 65
           V   AG+W    +++  + +   A            DL  I+ +DTIGA LI   + EK 
Sbjct: 27  VCHVAGDWSVLALAQAGEVERRRAAMAQAAEQGMRWDLHGISRLDTIGALLIWQAWGEKL 86

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
             +++    S   + +F+ ++    +         +F +         +G  I++   + 
Sbjct: 87  PERVRW---SAGQQDVFNALAMNKGEVQTAPPKPETFGW------VRGLGGAILQAAENG 137

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            +   +LG ++ + G          G    +  Q+Y  G   + +  L+ F+ G V++  
Sbjct: 138 RALLIMLGQLMLDLGGMLRRPRL--GPWREISAQVYRTGAQALGITALVGFLIGVVLSYL 195

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            A QL   GA+ F + L+ +  +RE+G +L A+++AGRSGSAI A+IG M++ +E+DA+ 
Sbjct: 196 SAQQLQMIGADRFIVRLLGVSIVRELGPVLAAILVAGRSGSAITAQIGVMRVTQELDAML 255

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MG+   + LI PR+ AL +++PLL +  +  AI+G  +       +    F +      
Sbjct: 256 VMGISHGQRLILPRVVALAVTMPLLVLWTDAMAILGGMLAAQMQLGVSAQWFLTSLPDAI 315

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           +L N + G+ K       I ++A   G  +  ++ SLG+  TT VV SI+ VI++D+L+A
Sbjct: 316 SLTNYWIGIFKGVTFGILIALIACHFGLRIQPNTESLGRGTTTSVVTSITGVILLDALYA 375

Query: 366 IFYFAIGI 373
           I + ++G+
Sbjct: 376 IIFSSVGV 383


>gi|170691590|ref|ZP_02882755.1| protein of unknown function DUF140 [Burkholderia graminis C4D1M]
 gi|170143795|gb|EDT11958.1| protein of unknown function DUF140 [Burkholderia graminis C4D1M]
          Length = 389

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 95/370 (25%), Positives = 168/370 (45%), Gaps = 16/370 (4%)

Query: 8   VFRFAGNWKSPEISEIADD---VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-FME 63
           + R +G W +  ++        +    +          DLS I  +D +G + +   +  
Sbjct: 31  IVRLSGQWTALALARDRATGHVIPQLRSLEGAEGIGQWDLSRIDRMDHVGGQALWRVWGH 90

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           +     +L      I +  +L+           +                +G  I  F  
Sbjct: 91  RMPPDTELTDTQRDIFERIALLDTVRETAEPVIRFDP----------FTRLGLAIFSFFE 140

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                  +LG V+ +                 +   +Y  G   +P+  L++F+ G V++
Sbjct: 141 HLYGGVAMLGRVVLDLLAIARKPAI--TPWTEISANIYNAGTKALPITALVAFLIGIVLS 198

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
              A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA
Sbjct: 199 YLSAQQLRLFGANQYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDA 258

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R MG+     LI PR+ AL +++PLL +  +  A+ G ++       I  + F      
Sbjct: 259 MRVMGIPHGLRLILPRVIALGVAMPLLVMWTDIIALTGGAVAAKIVLGIDMSYFARALPG 318

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              +AN++ GL K       I I     GF +  +S SLG+  TT VV SI+IVI+ D++
Sbjct: 319 VVPVANLWIGLGKGVAFGMLIAIAGCHFGFRIKANSQSLGEGTTTSVVTSITIVILADAV 378

Query: 364 FAIFYFAIGI 373
           FAI +  +G+
Sbjct: 379 FAILFQNVGL 388


>gi|296160361|ref|ZP_06843178.1| protein of unknown function DUF140 [Burkholderia sp. Ch1-1]
 gi|295889342|gb|EFG69143.1| protein of unknown function DUF140 [Burkholderia sp. Ch1-1]
          Length = 377

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 171/370 (46%), Gaps = 16/370 (4%)

Query: 8   VFRFAGNWKSPEISEIADD---VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-FME 63
           + R +G W +  ++        + + ++          DLS I  +D +G + +   +  
Sbjct: 19  IVRLSGQWTALALARDRATGHVIPLLLSLVGAEGIGGWDLSRIDRMDHVGGQALWRVWGH 78

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           K      L      I +  +L+           K           +    +G  I  F  
Sbjct: 79  KMPADTTLTDTQRDIFERIALLDTVRETAEPVIK----------LDPFTRLGLAIFSFFE 128

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                  +LG V+ +                 +   +Y  G   +P+  L++F+ G V++
Sbjct: 129 HLYGGVAMLGRVVLDLLAIARKPKI--TPWTEISANVYNAGTQALPITALVAFLIGIVLS 186

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
              A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA
Sbjct: 187 YLSAQQLRLFGANQYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDA 246

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R MG+     LI PR+ AL +++PLL +  N  A+ G ++       I  + F      
Sbjct: 247 MRVMGIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKIVLGIDMSYFARALPG 306

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              +AN++ GL K       I IV    GF +  +S SLG+  TT VV SI+IVI+ D++
Sbjct: 307 VVPVANLWIGLGKGVVFGMLIAIVGCHFGFRIKANSQSLGEGTTTSVVTSITIVILADAV 366

Query: 364 FAIFYFAIGI 373
           FAI +  +G+
Sbjct: 367 FAILFQNVGL 376


>gi|327399071|ref|YP_004339940.1| hypothetical protein Hipma_0911 [Hippea maritima DSM 10411]
 gi|327181700|gb|AEA33881.1| protein of unknown function DUF140 [Hippea maritima DSM 10411]
          Length = 349

 Score =  250 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 105/347 (30%), Positives = 182/347 (52%), Gaps = 18/347 (5%)

Query: 27  VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLIS 86
           +   I K  +   AI+D+   +++DT     +     K         ++ + + L +++ 
Sbjct: 21  LSKLITKINECKPAIIDVRGASKLDTSSLVYLASLNIKLL-------LNKNDQSLLNIVL 73

Query: 87  FTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASS 146
               +K K +  +            Y +G   V+ + +       LG V      F  + 
Sbjct: 74  QHIPEKKKKKDSR---------GFLYSLGYAFVERLKELYVFMSFLGEVFVGFIGFILNP 124

Query: 147 YKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206
            +F+  L S ++ +  +G + +P++  ISF+ GAVIA  G+ +L QFGA IF +DL+SI 
Sbjct: 125 KRFR--LKSTLKDVELMGFNAIPILTTISFLIGAVIAYHGSVRLKQFGANIFVVDLVSIS 182

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            LRE+G L+ A+++AGRS S+  A+IG MK+ EE+D I+TMG++   IL+ P+I ++++ 
Sbjct: 183 VLRELGPLIVAILLAGRSSSSYTAQIGIMKVTEEVDVIKTMGVNPYDILVFPKIVSMLVC 242

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326
           +PLL +LA+   ++G  +V     +I    F  R H    +    +G++KAP  A  I  
Sbjct: 243 VPLLIVLADVMGVLGGMVVAHLSLNITVRDFILRLHQAIGIKTFVSGILKAPAFAFLIAT 302

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           +   +GF    +  S+GK VT  VV SI  VII D++F++ +  +GI
Sbjct: 303 IGAFKGFQTKKNVESIGKSVTVSVVDSIFGVIIADAIFSVLFRWMGI 349


>gi|148263112|ref|YP_001229818.1| hypothetical protein Gura_1039 [Geobacter uraniireducens Rf4]
 gi|146396612|gb|ABQ25245.1| protein of unknown function DUF140 [Geobacter uraniireducens Rf4]
          Length = 256

 Score =  250 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 72/252 (28%), Positives = 131/252 (51%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           + K  + + S    +G +++          +  G  + +++Q+ ++G     V+ L +  
Sbjct: 5   VEKLGSLTLSILQEMGRMVNFIIYAFYLIIRSPGKPVHILKQIRFIGAKSFFVIFLTASF 64

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG V+  QG + L++FG+E      +++  +RE+G +LTA+M+ GR+GSAI AEIG M+I
Sbjct: 65  TGMVLGLQGYYTLAKFGSEGMLGSAVALSLIRELGPVLTALMVTGRAGSAISAEIGIMRI 124

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+ TM L+  + L+SP++ A IISLPLL  + +   I G  +V  K   +    +
Sbjct: 125 TEQIDALETMALEPCKYLVSPKLLAAIISLPLLCAIFDVVGIYGGYLVGVKLLGVNPGAY 184

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
           F     +    ++++G+IK+      I  +   +G+  G  +  + +  T  VV S  +V
Sbjct: 185 FHEMEKSVEWKDVYSGIIKSVSFGVIIAWICCYKGYFAGHGAEGVSRATTAAVVMSSVMV 244

Query: 358 IIIDSLFAIFYF 369
           +I D        
Sbjct: 245 LIWDYFLTSVLL 256


>gi|91781621|ref|YP_556827.1| ABC transporter inner membrane protein [Burkholderia xenovorans
           LB400]
 gi|91685575|gb|ABE28775.1| Putative ABC transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
          Length = 377

 Score =  250 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 171/370 (46%), Gaps = 16/370 (4%)

Query: 8   VFRFAGNWKSPEISEIADD---VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-FME 63
           + R +G W +  ++        + + ++          DLS I  +D +G + +   +  
Sbjct: 19  IVRLSGQWTALALARDRATGHVIPLLLSLVGAEGIGGWDLSRIDRMDHVGGQALWRVWGH 78

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           K      L      I +  +L+           K           +    +G  I  F  
Sbjct: 79  KMPADTTLTDTQRDIFERIALLDTVRETAEPVIK----------LDPFTRLGLAIFSFFE 128

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                  +LG V+ +                 +   +Y  G   +P+  L++F+ G V++
Sbjct: 129 HLYGGVAMLGRVVLDLLAIVRKPKI--TPWTEISANVYNAGTQALPITALVAFLIGIVLS 186

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
              A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA
Sbjct: 187 YLSAQQLRLFGANQYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDA 246

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R MG+     LI PR+ AL +++PLL +  N  A+ G ++       I  + F      
Sbjct: 247 MRVMGIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAARIVLGIDMSYFARALPG 306

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              +AN++ GL K       I IV    GF +  +S SLG+  TT VV SI+IVI+ D++
Sbjct: 307 VVPVANLWIGLGKGVVFGMLIAIVGCHFGFRIKANSQSLGEGTTTSVVTSITIVILADAV 366

Query: 364 FAIFYFAIGI 373
           FAI +  +G+
Sbjct: 367 FAILFQNVGL 376


>gi|192359616|ref|YP_001982090.1| ABC-type transport system, permease [Cellvibrio japonicus Ueda107]
 gi|190685781|gb|ACE83459.1| ABC-type transport system, permease component [Cellvibrio japonicus
           Ueda107]
          Length = 375

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 88/369 (23%), Positives = 179/369 (48%), Gaps = 18/369 (4%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFMEK 64
           +    GNW+     + A      +  S  + +  ++   +   D+  A  ++    + + 
Sbjct: 22  ILCLYGNWQLGSAPDGATLCASLMAASGTTQTLQLNTDQLGTWDSSLAIALLQLARWCDT 81

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
           +   + ++ V   ++QL  L +     +      +  +             + +      
Sbjct: 82  HQITLDIRAVPEGLQQLLRLATAIPPHQPSQSNDRHPWH------------QSLQDAWQG 129

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           + +    +G       ++     K +   ++    +   G   + +V LI+ + G ++A 
Sbjct: 130 TRTTLIFIGDTSLALSQWVRGQAKTRRSDIAFF--IEQAGPRALAIVTLIALLVGMILAY 187

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            G+ QL Q GA+++  DL+++  +RE+G L+TAV++AGR+G+A  A++G+M++NEEIDA+
Sbjct: 188 LGSVQLRQLGAQVYVADLVALGMVREMGALMTAVIMAGRTGAAYAAQLGTMQVNEEIDAL 247

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           +TMG+  +  L+ PR+ AL++ +PLL I AN   ++G ++V     D+ F  +  +    
Sbjct: 248 KTMGISSIEFLVLPRLLALVLVMPLLCIYANVIGMVGGALVATSM-DVNFIQYILQTQGA 306

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               +I TGL+K+ F    I I   + G   G +S+++G   T  VV++I  +++ D+ F
Sbjct: 307 VGWVDISTGLVKSVFFGVLIAIAGCQAGIHCGRNSDAVGMAATNAVVRAIVYLVVADAAF 366

Query: 365 AIFYFAIGI 373
            I Y  +GI
Sbjct: 367 NILYDKLGI 375


>gi|328953206|ref|YP_004370540.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM
           11109]
 gi|328453530|gb|AEB09359.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM
           11109]
          Length = 256

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 73/263 (27%), Positives = 139/263 (52%), Gaps = 7/263 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
            K+L   +G+  + FI ++      L   +   G F    YK      +L++Q+Y +GV 
Sbjct: 1   MKDLLRTLGRATIDFIQEAGRMQLFLFQTL---GLFFLPPYKP----FNLVKQVYVIGVR 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
              +++L +  TG V+  QG + L +FGAE      +++  +RE+G +LTA+M+ GR+GS
Sbjct: 54  SSSIILLTAMFTGMVLGLQGYYTLRKFGAESALGSAVALSLIRELGPVLTALMVTGRAGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           AI AEIG M+I E++DA+ TM ++ ++ ++ P++ A +I++PLLT   +F  I+G  +V 
Sbjct: 114 AITAEIGIMRITEQLDALDTMAINPMQYVVMPKVIAGLIAVPLLTAFFDFVGIVGGYLVG 173

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
                +    +FS    +    ++  G +K+      + +VA  +G+     +  + +  
Sbjct: 174 VVMLGVSSGSYFSGMIQSVETLDVNGGFVKSIVFGLTVTLVACYKGYFTSHGAEGVSQST 233

Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369
           T  VV +  +++  D +   F+ 
Sbjct: 234 TEAVVLAAILILGWDYVLTSFFM 256


>gi|307635079|gb|ADI85448.2| ABC transporter, membrane protein of unknown function DUF140
           [Geobacter sulfurreducens KN400]
          Length = 380

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 87/375 (23%), Positives = 166/375 (44%), Gaps = 14/375 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S +G    R  G+W +  +      V   +  +  S   + +   +   D+     ++  
Sbjct: 17  SADGTLSLRLEGDWLAGSLPLPPGAVEDELAVAPASR-LLFETGDLGRWDSGLITFLIRV 75

Query: 62  MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
                G+        +     +L +L +    + + +   +          L   I  ++
Sbjct: 76  QALCAGQGMAFDGGNLPEGARRLLALATAVPEQTLTHGGSRPP--------LLERIADRV 127

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +         +  LG V    G   A   +F+     L+  M   G   +P+V LISF+ 
Sbjct: 128 IGMWKSMVEMSAFLGEVTVACGRLLAGRARFRR--SELLAIMQECGAQALPIVSLISFLV 185

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G ++A  GA QLS FGA+I+   L+ I  +R +G ++T +++AGR+G+A  A +G+M++N
Sbjct: 186 GLILAFVGAVQLSMFGAQIYVASLVGIGIVRIMGAIMTGIIMAGRTGAAFAARLGTMQVN 245

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+ T+G+  V  L+ PR+ AL++ +PLL + A+   I+G   V     D+    + 
Sbjct: 246 EEIDALATLGISPVEFLVIPRVAALVLMMPLLCLYADLMGILGGLAVGVLMLDLNVTEYI 305

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +       L + + GL  +      + +     G   G  ++S+G   T+ VV  I  ++
Sbjct: 306 TMTKKAVRLKDFWVGLFHSGVFGVLVALAGCLRGIQCGRSASSVGDAATSAVVTGIVSIV 365

Query: 359 IIDSLFAIFYFAIGI 373
           +  ++  +    +GI
Sbjct: 366 VATAVITVICNILGI 380


>gi|303247224|ref|ZP_07333498.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans
           JJ]
 gi|302491383|gb|EFL51271.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans
           JJ]
          Length = 368

 Score =  249 bits (637), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 90/355 (25%), Positives = 161/355 (45%), Gaps = 12/355 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG---AELI 58
             +G+    F+G W+    S     +  A+ KS    +   + + +T+ D+        I
Sbjct: 3   ESDGVLTLTFSGTWRIDRPSPDLSPIRAALGKSPAPKTLAFESAKVTDWDSRFLTQCRAI 62

Query: 59  MYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
           +   + +     L G+    + L  L      ++   +K   + F     ++        
Sbjct: 63  LALAKAHGVTPDLSGLPAGAKSLLELAEKVPERQGAARKEASTPFLTRVADM-------A 115

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
                   +    +G V             F+    +L   +Y  GV  +P+V LIS + 
Sbjct: 116 FGAWQGVHNLLDFVGDVTLACLALAGGRAVFQR--SNLFALIYQAGVEALPIVSLISLLV 173

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G ++A  GA QLSQFGA+I+   ++ I  +R +G ++T +++AGR+G+A  AE+G+M++N
Sbjct: 174 GLILAFVGAIQLSQFGAQIYVSTIVGIAMVRVMGAIMTGIIMAGRTGAAYAAELGTMQVN 233

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+RT G    + L+ PR+ AL++ +PLL I A+   I+G  IV      I    + 
Sbjct: 234 EEIDALRTFGFSPTQFLVLPRMIALVLMMPLLCIYADIMGILGGFIVGVFMLKINPIQYL 293

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
           +    +  LAN + GL+ +      + +     G   G  + ++G+  T  VV S
Sbjct: 294 THTWQSVPLANFWIGLVHSTVFGVLVAMAGCYRGMRCGRSALAVGQATTAAVVTS 348


>gi|283853770|ref|ZP_06370995.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B]
 gi|283570832|gb|EFC18867.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B]
          Length = 385

 Score =  249 bits (636), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 91/352 (25%), Positives = 163/352 (46%), Gaps = 12/352 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDT---IGAELIMY 60
           NGI     +G W+          V  A+  S      +   +A+T  D+        ++ 
Sbjct: 22  NGILTLTLSGVWRLDRPFPPLAPVKDALATSPAPRKLVFAATAVTGWDSRFLADCRAVLV 81

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
              +   ++++ G+      L  L +    ++   +K   + F  S  +L        + 
Sbjct: 82  LARERGVEVEVSGLPEGAASLLDLAAKVPERQGAARKTSHAAFLESMGDLG-------LG 134

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           F     +    LG V             F+    +L+  +Y  GV  +P+V LIS + G 
Sbjct: 135 FAQGVVNLLEFLGEVTLACLALLRGRAVFQR--SNLVTLIYQAGVEALPIVSLISLLVGL 192

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           ++A  GA QLSQFGA+I+   ++ I  +R +G ++T +++AGR+G+A  AE+G+M++NEE
Sbjct: 193 ILAFVGAIQLSQFGAQIYVSTIVGIAMVRVMGAIMTGIIMAGRTGAAYAAELGTMQVNEE 252

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA++T G    + L+ PR+ AL++ LPLL + A+   I+G  IV      I    + + 
Sbjct: 253 IDALKTFGFSPTQFLVLPRMIALVLMLPLLCVYADLMGILGGFIVGVFMLHINPIQYLTH 312

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
              +  LAN + GL+ +      + +     G   G  + ++G+  T+ VV 
Sbjct: 313 TWQSVPLANFWIGLVHSTVFGVLVAMAGCYRGMRCGRSALAVGQAATSAVVT 364


>gi|187922498|ref|YP_001894140.1| hypothetical protein Bphyt_0491 [Burkholderia phytofirmans PsJN]
 gi|187713692|gb|ACD14916.1| protein of unknown function DUF140 [Burkholderia phytofirmans PsJN]
          Length = 377

 Score =  249 bits (636), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 169/370 (45%), Gaps = 16/370 (4%)

Query: 8   VFRFAGNWKSPEISEIADD---VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-FME 63
           + R +G W +  ++        + +  +          DLS I  +D +G + +   +  
Sbjct: 19  IVRLSGQWTALALARDRATGHVIPLLRSLVGAEGIGQWDLSRIDRMDHVGGQALWRVWGH 78

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           K      L      I +  +L+     K     +                +G  I  F  
Sbjct: 79  KMPPDTTLTDTQRDIFERIALLDTVREKAEPVIRFDP----------LTRLGLAIFSFFE 128

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                  +LG V+ +                 +   +Y  G   +P+  L++F+ G V++
Sbjct: 129 HLYGGVAMLGRVVLDLLAIARKPKI--TPWTEISANIYNAGTKALPITALVAFLIGIVLS 186

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
              A QL  FGA  + ++++ +  +RE+G +L A+++AGRSGSAI A+IG M++ EE+DA
Sbjct: 187 YLSAQQLRLFGANQYIVNILGLSVIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELDA 246

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R MG+     LI PR+ AL +++PLL +  N  A+ G ++       I  + F      
Sbjct: 247 MRVMGIPHGLRLILPRVVALGVAMPLLVMWTNIIALTGGALAAKIALGIDMSYFARALPG 306

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              +AN++ GL K       I IV    GF +  +S SLG+  TT VV SI+IVI+ D++
Sbjct: 307 VVPVANLWIGLGKGVAFGMLIAIVGCHFGFRIKANSQSLGEGTTTSVVTSITIVILADAV 366

Query: 364 FAIFYFAIGI 373
           FAI +  +G+
Sbjct: 367 FAILFQNVGL 376


>gi|154173911|ref|YP_001408228.1| stas domain-containing protein [Campylobacter curvus 525.92]
 gi|112802195|gb|EAT99539.1| stas domain protein [Campylobacter curvus 525.92]
          Length = 368

 Score =  248 bits (634), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 111/372 (29%), Positives = 186/372 (50%), Gaps = 14/372 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           + +G+T F+F G +   + ++I  + +  I K+    S   D   +  +D       +  
Sbjct: 11  AASGVTSFKFIGKFTYKD-AKILQNTLSRIAKA--RGSLRFDFLQLLHVDYA-----VLI 62

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
           + K   K K     T   ++ ++IS    + I               N    +G+KI   
Sbjct: 63  LVKNAIKGKKAEFVTSDTKIKAMISLLDDESIDFSYIPPQNKL----NFFARLGEKICDG 118

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             +       LG  +  T +   +    +  L      +   GV+ V +V L +F+ G V
Sbjct: 119 FKNLLEFGSFLGEFLIKTIKIFVNPMSLR--LREFSNYIKDGGVNAVFIVSLTAFLIGVV 176

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A  G+  L+ FGA IF +++M +L LRE+  L+ A+++AGRS S+  A+IG+MK+ EEI
Sbjct: 177 LAYLGSAMLANFGASIFIVEIMGMLTLREVAPLIAAIVVAGRSASSFTAQIGAMKLTEEI 236

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA++TMG +    L+ PRI A+++SLP++  +A+  +I+G  ++     DI FA + SRF
Sbjct: 237 DAMKTMGFEPFNFLVLPRIIAMVLSLPIIIFIADAISILGQMLICQGVLDISFADYLSRF 296

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                L +   G+IKAPF    I I+    GF V  ++ SLG+  T  VV +I  VI +D
Sbjct: 297 KDMVELRHFAVGMIKAPFFGAIIAIIGCMRGFDVNSNAQSLGEMTTISVVNAIFWVIALD 356

Query: 362 SLFAIFYFAIGI 373
           + FAI +  + I
Sbjct: 357 AFFAIIFMWLKI 368


>gi|223940090|ref|ZP_03631954.1| protein of unknown function DUF140 [bacterium Ellin514]
 gi|223891275|gb|EEF57772.1| protein of unknown function DUF140 [bacterium Ellin514]
          Length = 399

 Score =  248 bits (634), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 95/369 (25%), Positives = 181/369 (49%), Gaps = 14/369 (3%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME-- 63
             V R +G   +     +   +  A+       +  V+++ +T  D+ G   +    +  
Sbjct: 40  RFVLRLSGRLDADSTPFLWQRLQSAL-VVPPGATLEVNVAPLTYSDSAGFAFLYLLSKGC 98

Query: 64  -KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                ++ L G+    ++     S    +  + ++P R       ++L   IG  ++   
Sbjct: 99  MTPQSQVSLNGLKPEYQKALQNYSMEDVQAYQGEQPVR-------QSLMDEIGMAVIAKT 151

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
            +   +   +G VIS  G         +     ++R     G + +P+V LIS + G VI
Sbjct: 152 LEVRQKVIFVGDVISGLGYVLTHPRWMRRN--EIVRIFETAGANALPIVSLISLLLGLVI 209

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A + A   ++FGA+I+  +L+ ++ +RE+  ++TA+++AGRSGSA  AE+G+MK+NEE++
Sbjct: 210 AFEAAQPFARFGAKIYIANLIGLIMVRELSPVMTAILLAGRSGSAFAAELGTMKVNEELN 269

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+ T+GLD +R L+  RI A ++  PLLTI +  + ++G  +V+      P ++ + +  
Sbjct: 270 ALETIGLDPMRFLVVQRILASLLLTPLLTIYSMATGVLGGVLVM-LGLGFPLSIAWHQLQ 328

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           S+  + +I  G++KA      +   A   G        ++G+  T  VV  I ++II DS
Sbjct: 329 SSVRINDIAFGILKAFVFGGIVAGTACLRGLETKSGPAAVGESTTRSVVSGILLIIIADS 388

Query: 363 LFAIFYFAI 371
           +FAI  F +
Sbjct: 389 VFAILKFVL 397


>gi|295675321|ref|YP_003603845.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1002]
 gi|295435164|gb|ADG14334.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1002]
          Length = 389

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 97/370 (26%), Positives = 171/370 (46%), Gaps = 16/370 (4%)

Query: 8   VFRFAGNWKSPEISEIADD---VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-FME 63
           + R +G W +  ++   D    +    + +        DLS +  +D +G + +   +  
Sbjct: 31  IVRLSGQWTALALARDRDTGHVIPQLRSLTGAQGIGGWDLSRVDSMDHVGGQALWRVWGR 90

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           K      L      I +  +L+           +                +G  I  F+ 
Sbjct: 91  KLPPGTALTDTQRDIFERIALLDTVRESAEPVTRFDP----------FTRLGLGIFSFVE 140

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                  +LG V+ +                 +   +Y  G   +P+  L++F+ G V++
Sbjct: 141 HMQGGVAMLGRVVLDLLAILRKPKL--TPWTEISANIYNAGARALPITALVAFLIGIVLS 198

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
              A QL  FGA  F ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA
Sbjct: 199 YLSAQQLRIFGANQFIVNILGLAVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDA 258

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R MG+     LI PR+ AL +++PLL +  N  ++ G ++       I  + F  +   
Sbjct: 259 MRVMGIPHGLRLILPRVIALAVAMPLLVMWTNVISLTGGALAAKLVLGIDMSFFARQLPV 318

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              +AN++ GL K       I I     GF +  +S SLG+  TT VV SI+IVI+ D++
Sbjct: 319 VVPIANLWIGLGKGAVFGMLIAIAGCHFGFRIKANSQSLGEGTTTSVVTSITIVILADAV 378

Query: 364 FAIFYFAIGI 373
           FAI +  +G+
Sbjct: 379 FAILFQNVGL 388


>gi|227822231|ref|YP_002826202.1| toulene ABC transporter, permease protein, putative [Sinorhizobium
           fredii NGR234]
 gi|227341231|gb|ACP25449.1| toulene ABC transporter, permease protein, putative [Sinorhizobium
           fredii NGR234]
          Length = 321

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 146/326 (44%), Positives = 204/326 (62%), Gaps = 11/326 (3%)

Query: 50  IDTIGAELIMYFME----KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105
           +DT GA +I  FM     +  G+I          +L   +    R+  ++++        
Sbjct: 1   MDTAGAWIIRRFMNGIGSEAGGEIHFAHGGDRYVELVRALPGELRQPERSKRKDPL---- 56

Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
            F+ L   IG+  V    D+ +  +ILG  +   G              +++ Q+  +GV
Sbjct: 57  -FQRLFAPIGEVTVSIWTDTVAAMYILGSAVR--GAQMKLGRHAGVSPAAIVHQIDRMGV 113

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
              P++ L+SF+ GA+IAQQGAFQL  FGAEIF +DL+ ILQLREIGVLLTA+MIAGRSG
Sbjct: 114 MATPIITLMSFLIGAIIAQQGAFQLRSFGAEIFVVDLVGILQLREIGVLLTAIMIAGRSG 173

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           SAI AEIGSMK+ EE+DA++ MGL  V +L+ PR+ AL I+LPLLTI+ANF+A++GA++V
Sbjct: 174 SAITAEIGSMKMREEVDALKVMGLSPVGVLVFPRLVALTIALPLLTIIANFAALVGAALV 233

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
            W Y  I  A F +R       +++  G+IKAPFMA  IG+VA  EG  VG  + SLG++
Sbjct: 234 AWTYSGITVATFVARLQEAVDFSSVAAGMIKAPFMALIIGVVAAVEGLKVGGSAESLGRR 293

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAI 371
           VT+ VV+SI +VI+ID LFA+FY AI
Sbjct: 294 VTSSVVKSIFVVILIDGLFAMFYAAI 319


>gi|88706598|ref|ZP_01104301.1| conserved hypothetical protein, membrane (DUF140) [Congregibacter
           litoralis KT71]
 gi|88699094|gb|EAQ96210.1| conserved hypothetical protein, membrane (DUF140) [Congregibacter
           litoralis KT71]
          Length = 370

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 97/376 (25%), Positives = 169/376 (44%), Gaps = 17/376 (4%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDT---IGAEL 57
           +S +G    + +G+W S E+  +       +      DS  VD+S +++ D     G   
Sbjct: 9   LSADGD-QLQISGDWTSAELPALVPLFTTLLE---TRDSPAVDVSEVSDWDPRLEAGLLR 64

Query: 58  IMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
           +    +     I+  G      QL +L +     +         F     +     IG  
Sbjct: 65  LQRLAQAKARDIRYLGAPDSQTQLMNLATAVAPYEAPAASATGFFSTKQLRRSLADIG-- 122

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
                +D       LG V              +      +  +   G   + ++ L S +
Sbjct: 123 -----DDLLDSLEFLGGVGIALWRTLTGRSGMRR--REFVESLAQAGPQAIGIITLTSIL 175

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G ++A  GA QL QFGA +F  DL++I  LRE+G L+TAV++AGR+G+A  A++ +M+ 
Sbjct: 176 VGMILAYLGAAQLQQFGAAVFVADLVAIGMLREMGALMTAVVMAGRTGAAYAAQLSTMQT 235

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
           NEEIDAI T+G+D +  L++PR+ AL + +PLL + A+   ++G ++V       P   +
Sbjct: 236 NEEIDAISTLGIDPMEFLVAPRVLALFLMMPLLVVYADALGVLGGAVVAGGMGVTPLQ-Y 294

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            S+  +  T  + F G+ K    A  I     + G   G +S ++G+  T  VV ++  +
Sbjct: 295 ISQLSAAITPTHFFVGIFKGFVFAALIATAGCRAGMNAGRNSEAVGQATTEAVVTAVVYL 354

Query: 358 IIIDSLFAIFYFAIGI 373
           I+ D+   I    + I
Sbjct: 355 IVADAGINILCQLLDI 370


>gi|300114239|ref|YP_003760814.1| hypothetical protein Nwat_1606 [Nitrosococcus watsonii C-113]
 gi|299540176|gb|ADJ28493.1| protein of unknown function DUF140 [Nitrosococcus watsonii C-113]
          Length = 376

 Score =  246 bits (629), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 118/369 (31%), Positives = 194/369 (52%), Gaps = 12/369 (3%)

Query: 9   FRFAGNWKSPEISEIAD--DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
               G+W     +E+    DV  A  +   + +A V+LS +  +DT GA L++  +    
Sbjct: 14  LHVIGDWTLEYYAELQSRIDVFKAQAEKNNTLNATVELSGLNRLDTAGAVLLVELLGAER 73

Query: 67  GKI---KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
                 +  G++     L   +  T    +  Q+  RS        L    G++I  F  
Sbjct: 74  LAAFVKEGSGLTPARRALLDAVVRTMSMPLAPQRQARS----PLVALLAGTGERIELFWR 129

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                   +GL++ +         +++  L +L+ Q+   G++ + +V L++F+ GAV+A
Sbjct: 130 QQLLLLGFIGLILGSLTATFWRPNRWR--LTALVAQIQQTGLNAIGIVALLTFLVGAVVA 187

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
             GA  L  FGA I+++DL++   LRE GVLL A+++AGR+ SA  A+IGSMK NEEIDA
Sbjct: 188 FLGATVLQNFGATIYTVDLIAFSFLREFGVLLAAILLAGRTASAFTAQIGSMKANEEIDA 247

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +RT+GL    +L+ PR+ AL++SLP+LT +   S ++G  +V     DI    F +    
Sbjct: 248 LRTLGLSTAELLVLPRVLALLLSLPILTFIGMLSGMLGGGLVCLVVLDISALQFVTILQ- 306

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             +L +   GL KAP  A  I  +   EGF V   + S+G+  T+ VVQSI +VI++D++
Sbjct: 307 GISLKHFLVGLSKAPIFAFFIAAIGCLEGFKVSGSAQSVGEHTTSSVVQSIFMVILLDAI 366

Query: 364 FAIFYFAIG 372
            A+F+  +G
Sbjct: 367 AALFFMEMG 375


>gi|294084216|ref|YP_003550974.1| organic solvents resistance ABC transporter [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292663789|gb|ADE38890.1| ABC-type transport system involved in resistance to organic
           solvents [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 258

 Score =  245 bits (627), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 69/265 (26%), Positives = 128/265 (48%), Gaps = 7/265 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
                 +IG+ ++ F          LG +   T      ++    +   L RQ   +G  
Sbjct: 1   MTGFVRNIGRAVLNF-------LASLGRITLFTLAAIRWTFFPPYYWQQLWRQTLDIGYY 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PVV L +  +G V+A Q     ++F AE     ++ +   RE+G +L  +M+AGR G+
Sbjct: 54  SLPVVGLTTLFSGMVLALQSYTGFARFSAEDTVATVVVLSVTRELGPVLAGLMVAGRIGA 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           ++ AEIG+M++ ++IDA+ T+    ++ L++PRI A  + LP L ++ +   + G  IV 
Sbjct: 114 SMAAEIGTMRVTDQIDALDTLSTRPMQYLVAPRIMAGTLCLPFLVLIGDIIGVFGGYIVG 173

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
                   +++ SR      +++I  GL+KA      I ++    G+  G  +  +G+  
Sbjct: 174 VYRLGFNPSIYLSRTLEYLEVSDITLGLVKAAVFGFLIALMGCYHGYHSGRGAEGVGRAT 233

Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371
           T  VV S  +++I + L    YF +
Sbjct: 234 TNAVVSSSILILIANYLVTALYFGV 258


>gi|67458472|ref|YP_246096.1| ABC transporter permease protein [Rickettsia felis URRWXCal2]
 gi|75537058|sp|Q4UNC7|Y080_RICFE RecName: Full=Probable ABC transporter permease protein RF_0080
 gi|67004005|gb|AAY60931.1| ABC transporter permease protein [Rickettsia felis URRWXCal2]
          Length = 259

 Score =  245 bits (626), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 71/265 (26%), Positives = 137/265 (51%), Gaps = 7/265 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N+   +GK+ +KF     S +         +    +S  +   +L  +IRQ+ ++G  
Sbjct: 2   LLNIANSVGKRTIKFAQSVGSFSLF-------SFAAVSSIIRPPLYLSLIIRQLLFIGFH 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PVV + +F +GAV+A Q     S+F AE     ++ +   RE+G +L  +M+AGR G+
Sbjct: 55  SLPVVAMTTFFSGAVLALQSYTGFSRFSAESSIATVVVLSLTRELGPVLAGLMVAGRVGA 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           +I AEI +M++ E++DA+ T+  D ++ L+ PR+ A II++P L ++ +   ++G  +V 
Sbjct: 115 SIAAEIATMRVTEQVDALYTLSTDPIKYLVFPRVIAAIITMPCLVLIGDIIGVMGGYLVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
               D     + +         ++ +GL+KA      I I++   G+  G  +  +G+  
Sbjct: 175 VYKLDFNSTAYLTSTFHYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRAT 234

Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371
           T+ VV S  +++I + L    +F +
Sbjct: 235 TSAVVNSSILILISNYLITELFFKV 259


>gi|145589257|ref|YP_001155854.1| hypothetical protein Pnuc_1074 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145047663|gb|ABP34290.1| protein of unknown function DUF140 [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 393

 Score =  245 bits (626), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 99/371 (26%), Positives = 174/371 (46%), Gaps = 16/371 (4%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK- 64
           + V+   G W     ++ A  +  +   +  + S   D++ +  +D  G   I+   E  
Sbjct: 34  VNVYTLGGVWTQVRAAQDA-WLHSSSTVNSAAKSLTCDVTKVETLDGAGIAFIIALQEAQ 92

Query: 65  --YHGKIKLQGVSTHIEQLFSLISFTHRK-KIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
               G  +L G++   + L                KPQR F  N        IG      
Sbjct: 93  TVAGGNFELIGLAERYQPLLKEFDPISNLFPAPVAKPQRGFVTN--------IGMGTANL 144

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           I DS      LG + S+      +    +      +      G++ +P++ L++F+ G +
Sbjct: 145 IKDSKGLITFLGHLGSDLVWSVRNLKHVR--WGDFVNAAVEAGINALPIIGLVAFLIGVI 202

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           ++ Q A  + QFGA  F   L ++  +RE+G L+TA+++AGRS +A  AEIG+M +N E+
Sbjct: 203 LSFQAAIGMKQFGAVSFVGPLAALGIVREMGPLITAILLAGRSSAAFAAEIGTMTVNSEV 262

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+ + GL  +R L+ PR+ A I+  P+LT+ A+  +I  + + +   Y IPF  F++  
Sbjct: 263 DALVSGGLSPMRFLVVPRVLAGILVAPILTLFADIVSIFASMLTM-LIYGIPFINFYNGM 321

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            S   + ++ +GLIKA      +  V    G   G  + ++G   T  VV SI +++I+D
Sbjct: 322 LSAVDVEDVTSGLIKATLFGVVVSAVGCLRGMQTGNGAAAVGISATRAVVSSIVMIVIVD 381

Query: 362 SLFAIFYFAIG 372
            +FA   +  G
Sbjct: 382 GIFAFISYKTG 392


>gi|257092687|ref|YP_003166328.1| hypothetical protein CAP2UW1_1065 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257045211|gb|ACV34399.1| protein of unknown function DUF140 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 370

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 98/368 (26%), Positives = 175/368 (47%), Gaps = 15/368 (4%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-FMEKY 65
              + AG+W    + +        + + + S  A  DL +I  +D+  A ++   +  ++
Sbjct: 15  LQVQLAGDWTLATLPQPISRFEARL-RELASREAAWDLLSIARLDSAAAVVLWRSWGRRW 73

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
              + L G       L   +             +  +            G+  +  +++ 
Sbjct: 74  PASLALSG---EHRLLLERVEAIPADLPARPSERLGWLLVP--------GRLALAAVDNL 122

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                ++G ++ + G  CA               +Y  G   +PV  LI F+ G V++  
Sbjct: 123 AGMVALVGQMVLDVGHLCAHPRDIP--WREFSANLYKSGAQALPVTALIGFLIGIVLSYL 180

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            A QL  FGA++F ++L+ I  +RE+G +L AV++AGRSGSA+ A++G M++ EEIDA+ 
Sbjct: 181 SALQLKTFGADVFIVNLLGISIVRELGPVLVAVLVAGRSGSAMTAQLGVMRVTEEIDALA 240

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           TMG+     L+ P+I AL +++PLL +  + + I+G  I      D+ +  F        
Sbjct: 241 TMGVSRSLRLVLPKIIALAVAMPLLVVWCSAAGIVGGMIAARLQMDLSYGFFIDTLPRVV 300

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            +AN++ G+ K       IG+VA   G  V  ++ SL  + TT VV SI++ I++D++FA
Sbjct: 301 PVANLWIGMSKGLVFGMLIGLVACHFGLRVKPNTESLSSQTTTSVVTSITVAILVDAVFA 360

Query: 366 IFYFAIGI 373
           I   + GI
Sbjct: 361 IMTRSFGI 368


>gi|294506238|ref|YP_003570296.1| ABC transporter permease [Salinibacter ruber M8]
 gi|294342566|emb|CBH23344.1| ABC transporter, permease [Salinibacter ruber M8]
          Length = 371

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 88/364 (24%), Positives = 167/364 (45%), Gaps = 13/364 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +   V    G+W        A  V++    S    +   D S + + D+     +    E
Sbjct: 9   DDTLVLAPVGDWTLDRPLPDARAVMVNAAPSSPVAAVAFDTSGLGDWDSSLVTFLFEAAE 68

Query: 64  ---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
               +   +++  + T +E+L +L           +             L   +G   + 
Sbjct: 69  YGRAHDLDVRIDTLPTSLERLVALSQAVPEADTTPEAED--------TALLARLGHWGLA 120

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
             +++ +    LG  + + G       + +     +  Q      S +P+V +IS + G 
Sbjct: 121 AYDEAHALVTFLGQAVRSVGAILTGRGRMRWRTFGVALQ--ESTASALPIVTVISLLVGL 178

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           ++A  GA  L +FGA+ F   L+S   LRE+G L+TA+++ GR+G+A  AE+GSM++NEE
Sbjct: 179 IVAFLGAVVLQRFGADYFVSYLVSYGMLRELGALMTAIIMTGRTGAAFAAELGSMQVNEE 238

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+ T G+  +  L++PRI A++++LP+LT+ A+   I+G   V     D+    F + 
Sbjct: 239 IDALETFGISPIDFLVTPRILAVVLALPMLTLYADALGIVGGMGVAVTMLDLTTTQFLTG 298

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                 L++   G+ KA      IG+     G   G  ++++G+  T+ VV  I +++  
Sbjct: 299 LLEPVVLSDALVGIFKAVVYGGIIGLAGCMRGLQAGDDASAVGQATTSAVVTGILLIVFA 358

Query: 361 DSLF 364
           +++ 
Sbjct: 359 NAVI 362


>gi|160872193|ref|ZP_02062325.1| toluene tolerance protein Ttg2B [Rickettsiella grylli]
 gi|159120992|gb|EDP46330.1| toluene tolerance protein Ttg2B [Rickettsiella grylli]
          Length = 262

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 69/258 (26%), Positives = 125/258 (48%), Gaps = 1/258 (0%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           I +K+ +            G       +      +F+     LI Q+Y++GV  + ++++
Sbjct: 3   ILEKLQQLGQRGLRLLVNFGRATLFLTQLLIRKPRFRKSFPLLIEQLYFIGVLSLIIMVI 62

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
                G V+  QG   L++FGA      L+++  +RE+G ++TA++ AGR+GSA+ AEIG
Sbjct: 63  SGLFIGMVVGLQGYNTLNKFGASQQLGQLVALSVVRELGPVITALLFAGRAGSALTAEIG 122

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
            MK  E++ ++  MG+D +  +ISPR W   IS+P L I+ +  AI G  +V   +  + 
Sbjct: 123 LMKSTEQLASMEMMGIDPLWRVISPRFWGGFISMPFLMIIFSTVAIWGGYLVGVVWLGVD 182

Query: 294 FAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
              F+S   S      +I  G+IK+      +  +A+ +G+        +G+  T  VV 
Sbjct: 183 GGTFWSAMQSAVNFHDDIINGIIKSIVFGGVVTWIAVFQGYDTIPTPQGVGRATTHTVVY 242

Query: 353 SISIVIIIDSLFAIFYFA 370
           S   ++ +D +       
Sbjct: 243 SSLAILGLDFVLTAVMMG 260


>gi|218679258|ref|ZP_03527155.1| putative transmembrane component of ABC transporter [Rhizobium etli
           CIAT 894]
          Length = 281

 Score =  243 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 135/281 (48%), Positives = 189/281 (67%), Gaps = 2/281 (0%)

Query: 91  KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFK 150
           ++    +P++    +    +   +GK      ++  +  +ILG  +              
Sbjct: 1   EEPAKPEPEQQEKVSLVARIFAPVGKMTYDLWDNFAASMYILGSAVRGAQMKFGRGS--G 58

Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210
               S++ Q+ ++GV  VP+++L+SF+ GA+IAQQGAFQL  FGAE+F +DL+ ILQLRE
Sbjct: 59  VSPASIVNQIDHMGVRAVPIILLMSFLIGAIIAQQGAFQLRYFGAEVFVVDLVGILQLRE 118

Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
           IGVLLT++MIAGRSGSAI AEIGSMK+ EEIDA++ MGL+ + +LI PR+ AL I+LPLL
Sbjct: 119 IGVLLTSIMIAGRSGSAITAEIGSMKMREEIDALKVMGLNPIGVLIFPRLVALTIALPLL 178

Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330
           T+LANF+++ GA+ V W Y  I FA F SR H   TL+ + +G+IKAPFMA  IGIVA  
Sbjct: 179 TVLANFASLAGAAAVAWGYSGITFANFLSRLHEAVTLSTVLSGMIKAPFMALVIGIVAAV 238

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           EG  VG  + SLG+ VT  VV++I +VI++D LFA+FY AI
Sbjct: 239 EGLKVGGSAESLGQHVTASVVKAIFVVILMDGLFAMFYAAI 279


>gi|157964160|ref|YP_001498984.1| ABC transporter permease protein [Rickettsia massiliae MTU5]
 gi|157843936|gb|ABV84437.1| ABC transporter permease protein [Rickettsia massiliae MTU5]
          Length = 264

 Score =  243 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 71/265 (26%), Positives = 136/265 (51%), Gaps = 7/265 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N+   +GK+ +KF     S +         +    +S  +   +L  +IRQ+  +G  
Sbjct: 7   LLNIANSVGKRTIKFAQSVGSFSLF-------SFAAVSSIIRPPLYLSLIIRQLLLIGFH 59

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PVV + +F +GAV+A Q     S+F AE     ++ +   RE+G +L  +M+AGR G+
Sbjct: 60  SLPVVAMTTFFSGAVLALQSYTGFSRFSAESSIATVVVLSLTRELGPVLAGLMVAGRVGA 119

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           +I AEI +M++ E++DA+ T+  D ++ L+ PR+   II++P L ++ +   ++G  +V 
Sbjct: 120 SIAAEIATMRVTEQVDALYTLSTDPIKYLVFPRVITAIITMPCLVLIGDIIGVMGGYLVG 179

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
               D   A + +         ++ +GL+KA      I I++   G+  G  +  +G+  
Sbjct: 180 VYKLDFNSAAYLTSTFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRAT 239

Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371
           T+ VV S  +++I + L    +F +
Sbjct: 240 TSAVVNSSILILISNYLITELFFKV 264


>gi|83814459|ref|YP_444490.1| ABC transporter, permease [Salinibacter ruber DSM 13855]
 gi|83755853|gb|ABC43966.1| ABC transporter, permease [Salinibacter ruber DSM 13855]
          Length = 371

 Score =  243 bits (622), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 88/364 (24%), Positives = 167/364 (45%), Gaps = 13/364 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +   V    G+W        A  V++    S    +   D S + + D+     +    E
Sbjct: 9   DDTLVLAPVGDWTLDRPLPDARAVMVNAAPSSPVAAVAFDTSGLGDWDSSLVTFLFEAAE 68

Query: 64  ---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
               +   +++  + T +E+L +L           +             L   +G   + 
Sbjct: 69  YGRAHDLDVRIDTLPTSLERLVALSQAVPEADTTPEAAD--------TALLARLGHWGLA 120

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
             +++ +    LG  + + G       + +     +  Q      S +P+V +IS + G 
Sbjct: 121 AYDEAHALVTFLGQAVRSVGAILTGRGRMRWRTFGVALQ--ESTASALPIVTVISLLVGL 178

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           ++A  GA  L +FGA+ F   L+S   LRE+G L+TA+++ GR+G+A  AE+GSM++NEE
Sbjct: 179 IVAFLGAVVLQRFGADYFVSYLVSYGMLRELGALMTAIIMTGRTGAAFAAELGSMQVNEE 238

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+ T G+  +  L++PRI A++++LP+LT+ A+   I+G   V     D+    F + 
Sbjct: 239 IDALETFGISPIDFLVTPRILAVVLALPMLTLYADALGIVGGMGVAVTMLDLTTTQFLTG 298

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                 L++   G+ KA      IG+     G   G  ++++G+  T+ VV  I +++  
Sbjct: 299 LLEPVVLSDALVGIFKAVVYGGIIGLAGCMRGLQAGDDASAVGQATTSAVVTGILLIVFA 358

Query: 361 DSLF 364
           +++ 
Sbjct: 359 NAII 362


>gi|15892052|ref|NP_359766.1| ABC transporter permease protein [Rickettsia conorii str. Malish 7]
 gi|34580917|ref|ZP_00142397.1| ABC transporter permease protein [Rickettsia sibirica 246]
 gi|229586334|ref|YP_002844835.1| ABC transporter permease protein [Rickettsia africae ESF-5]
 gi|81528535|sp|Q92JD8|Y129_RICCN RecName: Full=Probable ABC transporter permease protein RC0129
 gi|15619171|gb|AAL02667.1| ABC transporter permease protein [Rickettsia conorii str. Malish 7]
 gi|28262302|gb|EAA25806.1| ABC transporter permease protein [Rickettsia sibirica 246]
 gi|228021384|gb|ACP53092.1| ABC transporter permease protein [Rickettsia africae ESF-5]
          Length = 259

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 73/265 (27%), Positives = 137/265 (51%), Gaps = 7/265 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N+   +GK+ VKF     S +         +    +S  +   +L  +IRQ+ ++G  
Sbjct: 2   LFNIANSVGKRTVKFAQSVGSFSLF-------SFAAVSSIIRPPLYLSLIIRQLLFIGFH 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PVV + +F +GAV+A Q     S+F AE     ++ +   RE+G +L  +M+AGR G+
Sbjct: 55  SLPVVAMTTFFSGAVLALQSYIGFSRFSAESSIATVVVLSLTRELGPVLAGLMVAGRVGA 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           +I AEI +M++ E+IDA+ T+  D ++ L+ PR+   II++P L ++ +   ++G  +V 
Sbjct: 115 SIAAEIATMRVTEQIDALYTLSTDPIKYLVFPRVITAIITMPCLVLIGDIIGVMGGYLVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
               D   A + +         ++ +GL+KA      I I++   G+  G  +  +G+  
Sbjct: 175 VYKLDFNSAAYLTSTFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRAT 234

Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371
           T+ VV S  +++I + L    +F +
Sbjct: 235 TSAVVNSSILILISNYLITELFFKV 259


>gi|157803278|ref|YP_001491827.1| ABC transporter permease protein [Rickettsia canadensis str.
           McKiel]
 gi|157784541|gb|ABV73042.1| ABC transporter permease protein [Rickettsia canadensis str.
           McKiel]
          Length = 259

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 66/265 (24%), Positives = 135/265 (50%), Gaps = 7/265 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N+   +GK+ +KF  +  S +         +    +S  +   +   +IRQ+ ++G  
Sbjct: 2   LLNIANAVGKRTIKFAQNIGSFSLF-------SFAAVSSIIRPPLYFSLIIRQLLFIGFY 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PVV + +F +GAV+A Q     S+F AE     ++ +   RE+G +L  +M+AGR G+
Sbjct: 55  SLPVVTMTTFFSGAVLALQSYNGFSRFSAESSIATVVVLSLTRELGPVLVGLMVAGRVGA 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           +I AEI +M++ E++DA+ T+  D ++ L+ PR+   ++++P L ++ +   ++G  +V 
Sbjct: 115 SIAAEIATMRVTEQVDALYTLSTDPIKYLVFPRVITAMLTMPCLVLIGDVIGVMGGYLVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
                     + +         ++ +GL+KA      I I++   G+  G  +  +G+  
Sbjct: 175 VYKLGFNSTAYLTSTFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRAT 234

Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371
           T+ VV S  +++I + L    +F +
Sbjct: 235 TSAVVNSSILILISNYLITELFFKV 259


>gi|239947145|ref|ZP_04698898.1| membrane protein [Rickettsia endosymbiont of Ixodes scapularis]
 gi|239921421|gb|EER21445.1| membrane protein [Rickettsia endosymbiont of Ixodes scapularis]
          Length = 261

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 72/267 (26%), Positives = 139/267 (52%), Gaps = 7/267 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N+   +GK+ +KF     S +  +   +S+         +   +L  +IRQ+ ++G  
Sbjct: 2   LLNIANSVGKRTIKFAQSVGSFSLFIFAAVSSI-------IRPPLYLSLIIRQLLFIGFH 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + VV + +F +GAV+A Q     S+F AE     ++ +   RE+G +L  +M+AGR G+
Sbjct: 55  SLSVVAMTTFFSGAVLALQSYTGFSRFSAESSIATVVILSLTRELGPVLAGLMVAGRVGA 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           +I AEI +M++ E++DA+ T+  D ++ L+ PR+ A II++P L ++ +   ++G  +V 
Sbjct: 115 SIAAEIATMRVTEQVDALYTLSTDPIKYLVFPRVIAAIITMPCLVLIGDIIGVMGGYLVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
               D   A + +         ++ +GL+KA      I I++   G+  G  +  +G+  
Sbjct: 175 VYKLDFNSAAYLTSTFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRAT 234

Query: 347 TTCVVQSISIVIIIDSLFAIFYFAIGI 373
           T+ VV S  +++I + L    +F + I
Sbjct: 235 TSAVVNSSILILISNYLITELFFKVQI 261


>gi|157828003|ref|YP_001494245.1| ABC transporter permease protein [Rickettsia rickettsii str.
           'Sheila Smith']
 gi|165932699|ref|YP_001649488.1| ABC transporter permease [Rickettsia rickettsii str. Iowa]
 gi|157800484|gb|ABV75737.1| ABC transporter permease protein [Rickettsia rickettsii str.
           'Sheila Smith']
 gi|165907786|gb|ABY72082.1| ABC transporter permease protein [Rickettsia rickettsii str. Iowa]
          Length = 259

 Score =  242 bits (619), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 72/265 (27%), Positives = 137/265 (51%), Gaps = 7/265 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N+   +GK+ VKF     S +         +    +S  +   +L  +IRQ+ ++G  
Sbjct: 2   LFNIANSVGKRTVKFAQSVGSFSLF-------SFAAVSSIIRPPLYLSLIIRQLLFIGFH 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PVV + +F +GAV+A Q     S+F AE     ++ +   RE+G +L  +M+AGR G+
Sbjct: 55  SLPVVAMTTFFSGAVLALQSYIGFSRFSAESSIATVVVLSLTRELGPVLAGLMVAGRVGA 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           +I AEI +M++ E++DA+ T+  D ++ L+ PR+   II++P L ++ +   ++G  +V 
Sbjct: 115 SIAAEIATMRVTEQVDALYTLSTDPIKYLVFPRVITAIITMPCLVLIGDIIGVMGGYLVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
               D   A + +         ++ +GL+KA      I I++   G+  G  +  +G+  
Sbjct: 175 VYKLDFNSAAYLTSTFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRAT 234

Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371
           T+ VV S  +++I + L    +F +
Sbjct: 235 TSAVVNSSILILISNYLITELFFKV 259


>gi|119897982|ref|YP_933195.1| hypothetical protein azo1691 [Azoarcus sp. BH72]
 gi|119670395|emb|CAL94308.1| conserved hypothetical membrane protein [Azoarcus sp. BH72]
          Length = 365

 Score =  242 bits (619), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 99/366 (27%), Positives = 169/366 (46%), Gaps = 12/366 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           V   +G+W    +S     V      +     A    + +  +D+ GA L+     +   
Sbjct: 10  VCELSGDWTLRALSPHIAGV--RAALAAVPADAAWSCAGVLRLDSFGAALLWQAWGRNW- 66

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
                     IE   +L     R     + P       +       +G  +V F      
Sbjct: 67  -------PATIEISAALREVVARVAAAAEHPPAPPRPFTTTEAITLLGAGLVGFRRHLAD 119

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              +LG ++ +         ++   +L +   +Y V V  +PV  L+ F+ G V++   A
Sbjct: 120 LTVLLGQLVLDVVHLLRHPREWP--VLEISANLYKVAVRAMPVTALVGFLIGVVLSYLSA 177

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA+IF ++++ +  +RE+G +L +V++AGRSGSA+ A++G M++ EEIDA+  M
Sbjct: 178 LQLRAFGADIFIVNILGLGIIRELGPVLVSVLVAGRSGSAMTAQLGVMRVTEEIDALAAM 237

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     L+ P++ AL +++PLL +  +  A+ G  +  W    + F  F         L
Sbjct: 238 GISASLRLVLPKVLALTLAMPLLVLWTSAVALFGGMVSAWMELGMSFGFFLETLPRVVPL 297

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN+F GL K       I +VA   G  V  ++ SL    T  VV +I++VI++D+LFAI 
Sbjct: 298 ANVFVGLTKGLVFGLLISLVACHFGLRVKPNTESLSANTTASVVTAITVVILVDALFAIA 357

Query: 368 YFAIGI 373
              IG+
Sbjct: 358 TRRIGV 363


>gi|291287315|ref|YP_003504131.1| hypothetical protein Dacet_1405 [Denitrovibrio acetiphilus DSM
           12809]
 gi|290884475|gb|ADD68175.1| protein of unknown function DUF140 [Denitrovibrio acetiphilus DSM
           12809]
          Length = 256

 Score =  242 bits (618), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 72/263 (27%), Positives = 134/263 (50%), Gaps = 7/263 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
                   G  +V+ IN + S + +    I          ++ +     LI+Q+ ++G +
Sbjct: 1   MTKFFEFFGNPLVRLINATGSMSLMFFDTIRLI---FVPPFRLRL----LIKQIEFIGAN 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + V+IL    TG V A Q      +FGAE     ++++   RE+G +L+A+M+A R+GS
Sbjct: 54  SLSVIILTGSFTGMVFAFQSYIGFHKFGAEQIVGTVVALGMARELGPVLSAIMVAARAGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           AI AEIG+MK+ E++DA+  + +D V+ L  PRI A +I +P+L  +A F  ++G  +V 
Sbjct: 114 AITAEIGTMKVTEQVDALNALAVDPVQYLFVPRILAGLIVMPMLNAIAVFCGMVGGFLVS 173

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
                I   ++ +  +     ++ F+G++KA      + +V   +G+     +  +GK  
Sbjct: 174 ITVLGINKTLYLNYMYQYIEFSDFFSGMVKAFVFGGIVTLVGCYKGYMTTGGAEGVGKST 233

Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369
           T  VV +  ++++ D +   F F
Sbjct: 234 TESVVLACILILVFDYILTAFMF 256


>gi|15603974|ref|NP_220489.1| hypothetical protein RP096 [Rickettsia prowazekii str. Madrid E]
 gi|81554918|sp|Q9ZE51|Y096_RICPR RecName: Full=Probable ABC transporter permease protein RP096
 gi|3860665|emb|CAA14566.1| unknown [Rickettsia prowazekii]
 gi|292571688|gb|ADE29603.1| ABC transporter permease protein [Rickettsia prowazekii Rp22]
          Length = 259

 Score =  242 bits (618), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 70/265 (26%), Positives = 135/265 (50%), Gaps = 7/265 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
              + + +GK  +KF       +         +    +S  K   +L  +IRQ+ ++G  
Sbjct: 2   LLKIAHLVGKHTIKFAQSVGIFSLF-------SFIAISSIIKPPLYLSLIIRQLLFIGFH 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PVV + +F +GAV+A Q     S+F AE     ++ +   RE+G +L  +++AGR G+
Sbjct: 55  SLPVVAMTTFFSGAVLALQSYTGFSRFSAENSIATVVVLSLTRELGPVLAGLIVAGRVGA 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           +I AEI +M++ E++DA+ T+  D ++ L+ PR+ A II++P L ++ +   ++G  +V 
Sbjct: 115 SIAAEIATMRVTEQVDALYTLSTDPIKYLVCPRVIAAIITMPCLVLIGDIIGVMGGYLVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
               D     + +         ++ +GLIKA      I I++   G+  G  +  +G+  
Sbjct: 175 IYKLDFNSTAYLTSTFQYLEPIDVISGLIKATVFGFIISIISCYSGYYSGKGAKGVGRAT 234

Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371
           T+ VV S  +++I + L    +F +
Sbjct: 235 TSAVVNSSILILISNYLITELFFKV 259


>gi|328954039|ref|YP_004371373.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM
           11109]
 gi|328454363|gb|AEB10192.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM
           11109]
          Length = 377

 Score =  242 bits (618), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 94/375 (25%), Positives = 171/375 (45%), Gaps = 12/375 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S         +G+W        AD V   +  S+   + + D   +   DT     +M  
Sbjct: 12  SSADTLKVMISGDWLLGGELPAADRVQQRLEGSLGVRNLVFDTRELAHWDTGLLTFLMSL 71

Query: 62  M---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
                + +  +   G+    ++L  L S    KK  ++  +R        +    +G + 
Sbjct: 72  ATFCSQQNIYLDRDGLPPGAKRLLELASAVPEKKDAHKVEER-------LSFLAFLGNET 124

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           V F   +      +G  +           +++   L LI Q   VGV  +P+V LI F+ 
Sbjct: 125 VNFFQSAGELLEFIGDAVIAVLRLIRGQAQYRRADLGLIMQA--VGVQALPIVSLICFLV 182

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G ++A  GA QL  FGA+I+  DL+ I  +R +  ++T +++AGR+G A  A++G+M++N
Sbjct: 183 GLILAFIGAIQLKLFGAQIYVADLVGIAMVRLMAAIMTGIVMAGRTGGAFAAQLGTMQVN 242

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           +EIDA++T+G+  +  L+ PR+ AL + +PLL + AN   I+G   V      I F  ++
Sbjct: 243 QEIDALKTLGISPMEFLVLPRMLALALMMPLLCLYANVMGILGGMAVGVGMLGIGFIQYY 302

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           ++  +   L N+  GL         + +     G   G  ++++G   T+ VV +I  +I
Sbjct: 303 NQTAAAVGLWNLGIGLFSGTVFGVIVALAGCMRGMQCGRSASAVGDAATSAVVTAIVGII 362

Query: 359 IIDSLFAIFYFAIGI 373
           +  +   I    +GI
Sbjct: 363 VSTAAITILCNFLGI 377


>gi|118579001|ref|YP_900251.1| hypothetical protein Ppro_0562 [Pelobacter propionicus DSM 2379]
 gi|118501711|gb|ABK98193.1| protein of unknown function DUF140 [Pelobacter propionicus DSM
           2379]
          Length = 256

 Score =  242 bits (618), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 71/263 (26%), Positives = 127/263 (48%), Gaps = 7/263 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
              L   IG   +  I         L               +  G  + +++Q+ ++G  
Sbjct: 1   MSALIQAIGHSTIGSIRALGRMGWFLVHSFITM-------VRTPGNPVHVLKQLSFIGAK 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + V+ L +  TG V+  QG + L++FG+E      +++  +RE+G +LTA+M+ GR+GS
Sbjct: 54  SLFVIFLTAAFTGMVLGLQGYYTLTKFGSEGMLGTAVALSLIRELGPVLTALMVTGRAGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           AI AEIG M+I E+IDA+ TM LD  + LI+P++ A +I+LPLL  + +   I G  +V 
Sbjct: 114 AIAAEIGIMRITEQIDALETMALDPFKYLITPKLIAAMIALPLLCAIFDTIGIYGGWLVG 173

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
            K   +    +FS    +    ++++G  K+      I  +   +G+  G  +  + K  
Sbjct: 174 VKLLGVNPGAYFSEMEKSVVWRDVYSGFAKSFSFGVIIAWIGCYKGYFAGHGAEGVSKAT 233

Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369
           T  VV +  ++++ D        
Sbjct: 234 TEAVVLTSVLILVWDYFLTSVLL 256


>gi|91206155|ref|YP_538510.1| ABC transporter permease protein [Rickettsia bellii RML369-C]
 gi|157826543|ref|YP_001495607.1| ABC transporter permease protein [Rickettsia bellii OSU 85-389]
 gi|122425169|sp|Q1RGU3|Y1340_RICBR RecName: Full=Probable ABC transporter permease protein RBE_1340
 gi|91069699|gb|ABE05421.1| ABC transporter permease protein [Rickettsia bellii RML369-C]
 gi|157801847|gb|ABV78570.1| ABC transporter permease protein [Rickettsia bellii OSU 85-389]
          Length = 259

 Score =  242 bits (618), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 67/265 (25%), Positives = 135/265 (50%), Gaps = 7/265 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N+   IGK+ ++        +         +     S  +   +   +I+Q+ ++G  
Sbjct: 2   LLNIANSIGKRTIRLAQSIGKFSIF-------SLAAITSIIRPPLYFSLIIKQLLFIGFY 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PVV + +F +GAV+A Q     S+F AE     ++ +   RE+G +L  +M+AGR G+
Sbjct: 55  SLPVVAMTTFFSGAVLALQSYTGFSRFSAESSIATVVVLSLTRELGPVLAGLMVAGRVGA 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           +I AEIG+M++ E++DA+ T+  D ++ L+ P++ A II++P L ++ +   ++G  +V 
Sbjct: 115 SIAAEIGTMRVTEQVDALYTLSTDSIKYLVFPKVIAAIITMPCLVLIGDVIGVMGGYLVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
               D   + + +         ++ +GL+KA      I I++   G+  G  +  +G+  
Sbjct: 175 VYKLDFNSSTYLTSTFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRAT 234

Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371
           T+ VV S  +++I + L    +F +
Sbjct: 235 TSAVVNSSILILISNYLITELFFKV 259


>gi|91792032|ref|YP_561683.1| hypothetical protein Sden_0670 [Shewanella denitrificans OS217]
 gi|91714034|gb|ABE53960.1| protein of unknown function DUF140 [Shewanella denitrificans OS217]
          Length = 369

 Score =  242 bits (617), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 174/370 (47%), Gaps = 18/370 (4%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFME 63
                 G+W+    +  AD +  AI    QS S I+D  A+   D+  A  ++    + E
Sbjct: 15  CHIALRGDWQLGH-ALDADSICAAIPS--QSRSVIIDTQALGLWDSSLAVALLQLSRWCE 71

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           +    + L      ++QL  L +           P       +  +L   +   + +   
Sbjct: 72  QAELPLSLDACPPSLQQLLKLATEV---------PSNQTQSQAQLSLKQKLRANLTEQGQ 122

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                   LG  +     +     K +     +I  +   G  G+ +V LIS + G ++A
Sbjct: 123 GVYDSLLFLGNSVLAISHWLRGKAKTRA--SDIIFFIEQAGPQGLAIVTLISLLVGMILA 180

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
             G+ QL Q GA+++  DL++I  +RE+G L+TAV++AGR+G+A  A++G+M+ NEE+DA
Sbjct: 181 YLGSVQLRQLGAQVYVADLVAIGMVREMGPLMTAVIMAGRTGAAYAAQLGTMQANEEVDA 240

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG+  +  L+ PR+ AL+  +PL+ I ++   IIG  IV      +    +  +   
Sbjct: 241 LSVMGISAMEFLVVPRLVALVFIMPLMCIYSDAIGIIGGGIVANGM-GVSATQYLLQAQV 299

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +I TGL+K+      I I   + G A G +SN++G   T  VV++I  +++ D+ 
Sbjct: 300 AVDWLDITTGLVKSLIFGILIAIAGCQAGLACGRNSNAVGVATTKAVVKAIVFLVVSDAA 359

Query: 364 FAIFYFAIGI 373
             I Y  +GI
Sbjct: 360 LNILYDKLGI 369


>gi|104780316|ref|YP_606814.1| toluene tolerance ABC efflux transporter permease [Pseudomonas
           entomophila L48]
 gi|95109303|emb|CAK14000.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas
           entomophila L48]
          Length = 265

 Score =  242 bits (617), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 70/256 (27%), Positives = 136/256 (53%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           ++I  F   +     +LG      G   +      G    L++Q+Y VGV  + ++++  
Sbjct: 8   ERIRLFGRSAIDVLAVLGRSCLFLGHALSGRGGIGGGFQLLVKQLYSVGVLSLAIIVVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+M
Sbjct: 68  VFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +++PR+WA  ISLPLL ++ +   I G S V   +  +   
Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 187

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+    ++ + + ++  GLIK+   A  +  +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SFWGNMQNSVSFSDDVINGLIKSLVFAFVVTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|157825268|ref|YP_001492988.1| ABC transporter permease protein [Rickettsia akari str. Hartford]
 gi|157799226|gb|ABV74480.1| ABC transporter permease protein [Rickettsia akari str. Hartford]
          Length = 259

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 69/265 (26%), Positives = 137/265 (51%), Gaps = 7/265 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N+   +GK+ +K      S +         +    +S+ +   +L  +IRQ+ ++G  
Sbjct: 2   LLNIANLVGKRTIKCAQSVGSFSLF-------SFAAVSSTIRPPLYLSLIIRQLLFIGFH 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PVV + +F +GAV+A Q     S+F AE     ++ +   RE+G +L  +M++GR G+
Sbjct: 55  SLPVVAMTTFFSGAVLALQSYTGFSRFSAENSIATVVVLSLTRELGPVLAGLMVSGRVGA 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           +I AEI +M++ E++DA+ T+  D ++ L+ PR+ A I+++P L ++ +   ++G  +V 
Sbjct: 115 SIAAEIATMRVTEQVDALYTLSTDPIKYLVFPRVIATIVTMPCLVLIGDIIGVMGGYLVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
               D     + +         ++ +GL+KA      I I++   G+  G  +  +G+  
Sbjct: 175 VYKLDFNSTAYLTSTLHYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRAT 234

Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371
           T+ VV S  I++I + L    +F +
Sbjct: 235 TSAVVNSSIIILISNYLITELFFKV 259


>gi|15599651|ref|NP_253145.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|107099960|ref|ZP_01363878.1| hypothetical protein PaerPA_01000981 [Pseudomonas aeruginosa PACS2]
 gi|116052487|ref|YP_792800.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218893546|ref|YP_002442415.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254238883|ref|ZP_04932206.1| hypothetical protein PACG_05051 [Pseudomonas aeruginosa C3719]
 gi|254244732|ref|ZP_04938054.1| hypothetical protein PA2G_05604 [Pseudomonas aeruginosa 2192]
 gi|296391165|ref|ZP_06880640.1| putative ABC transport system permease protein [Pseudomonas
           aeruginosa PAb1]
 gi|313107040|ref|ZP_07793243.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016]
 gi|9950690|gb|AAG07843.1|AE004859_12 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|115587708|gb|ABJ13723.1| putative toluene tolerance ABC efflux transporter [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|126170814|gb|EAZ56325.1| hypothetical protein PACG_05051 [Pseudomonas aeruginosa C3719]
 gi|126198110|gb|EAZ62173.1| hypothetical protein PA2G_05604 [Pseudomonas aeruginosa 2192]
 gi|218773774|emb|CAW29588.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|310879745|gb|EFQ38339.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016]
          Length = 265

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 66/256 (25%), Positives = 129/256 (50%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           ++I  F          LG      G            L  L++Q+Y VGV  + ++++  
Sbjct: 8   ERIRLFGRAGLDVVAALGRSTLFLGHALLGRRTPGTGLHLLVKQLYSVGVLSLAIIVVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L  +G+E     ++++  LRE+G ++T ++ AGR+GSA+ AEIG+M
Sbjct: 68  LFIGMVLALQGYNILISYGSEQAVGQMVALTLLRELGPVVTGLLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +++PR+WA  IS+PLL  + +   I G ++V   +  +   
Sbjct: 128 KATEQLSSLEMIGVDPLKYIVAPRLWAGFISMPLLAAIFSVVGIWGGAMVAVDWLGVYEG 187

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F++   ++     ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SFWANMQNSVQFTEDVLNGVIKSIVFAFVVTWIAVYQGYDCEPTSEGISRATTRTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|302036233|ref|YP_003796555.1| putative toluene efflux ABC transporter ATP-binding protein
           [Candidatus Nitrospira defluvii]
 gi|300604297|emb|CBK40629.1| ABC transporter, membrane component, putative ATP-dependent toluene
           efflux transporter [Candidatus Nitrospira defluvii]
          Length = 255

 Score =  241 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 68/259 (26%), Positives = 127/259 (49%), Gaps = 7/259 (2%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170
              IG+  +               V+S+        ++    +  +++Q+ ++G     V
Sbjct: 4   IARIGRYTIDLTEQMGRMMLF---VLSSFAWLTRPPFR----VYQIVKQLNFIGYKSTFV 56

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           V+L +  TG V+A QG + L +FG+E      +++  +RE+G +L A+M+  R+GSA+ A
Sbjct: 57  VVLTAVFTGMVLALQGHYTLRKFGSEAVLGSAVALSIIRELGPVLAALMVTARAGSAMTA 116

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           EIG M+I E+IDA+ TM ++ ++ LI P++ A +I++PLL  L +   I G  +V  +  
Sbjct: 117 EIGIMRITEQIDALDTMAINPLQYLIGPKLVASLIAVPLLVALFDVVGIYGGYVVGVQLL 176

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
           +     ++S   S     +++ G++K+      I  V   +GF     +  LG   T  V
Sbjct: 177 NGNEGAYWSSIESAVEWKDVYGGILKSISFGLLISWVCCYKGFHTKHSAEGLGTATTEAV 236

Query: 351 VQSISIVIIIDSLFAIFYF 369
           V S  ++++ D        
Sbjct: 237 VLSAVLILVWDYFLTSVLL 255


>gi|49082890|gb|AAT50845.1| PA4455 [synthetic construct]
          Length = 266

 Score =  241 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 66/256 (25%), Positives = 129/256 (50%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           ++I  F          LG      G            L  L++Q+Y VGV  + ++++  
Sbjct: 8   ERIRLFGRAGLDVVAALGRSTLFLGHALLGRRTPGTGLHLLVKQLYSVGVLSLAIIVVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L  +G+E     ++++  LRE+G ++T ++ AGR+GSA+ AEIG+M
Sbjct: 68  LFIGMVLALQGYNILISYGSEQAVGQMVALTLLRELGPVVTGLLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +++PR+WA  IS+PLL  + +   I G ++V   +  +   
Sbjct: 128 KATEQLSSLEMIGVDPLKYIVAPRLWAGFISMPLLAAIFSVVGIWGGAMVAVDWLGVYEG 187

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F++   ++     ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SFWANMQNSVQFTEDVLNGVIKSIVFAFVVTWIAVYQGYDCEPTSEGISRATTRTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|152985726|ref|YP_001350363.1| ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150960884|gb|ABR82909.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7]
          Length = 265

 Score =  241 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 65/256 (25%), Positives = 129/256 (50%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +++  F          LG      G            L  L++Q+Y VGV  + ++++  
Sbjct: 8   ERVRLFGRAGLDVVAALGRSTLFLGHALLGRRTPGAGLHLLVKQLYSVGVLSLAIIVVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L  +G+E     ++++  LRE+G ++T ++ AGR+GSA+ AEIG+M
Sbjct: 68  LFIGMVLALQGYNILISYGSEQAVGQMVALTLLRELGPVVTGLLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +++PR+WA  IS+PLL  + +   I G ++V   +  +   
Sbjct: 128 KATEQLSSLEMIGVDPLKYIVAPRLWAGFISMPLLAAIFSVVGIWGGAMVAVDWLGVYEG 187

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F++   ++     ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SFWANMQNSVQFTEDVLNGVIKSIVFAFVVTWIAVYQGYDCEPTSEGISRATTRTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|149190595|ref|ZP_01868864.1| putative ABC superfamily transport protein [Vibrio shilonii AK1]
 gi|148835593|gb|EDL52561.1| putative ABC superfamily transport protein [Vibrio shilonii AK1]
          Length = 262

 Score =  241 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 74/254 (29%), Positives = 125/254 (49%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I K    + S     G           S  + K     LI+Q++ VGV  + ++++    
Sbjct: 8   IQKVGQRTLSLCQSWGRATFMLFGVLFSKPQPKKHFPLLIKQLHNVGVQSLAIIMVSGLF 67

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 68  IGMVLSLQGYVVLVDYGAEGSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 127

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D ++ +ISPR WA +IS+PLL ++     I G  +V   +  I    F
Sbjct: 128 TEQLSSMEMMAVDPLKRVISPRFWAGVISMPLLAMIFMAIGIWGGQLVGVDWKGIDHGSF 187

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   S+  L  +I   +IK    A  +  +A+  G+     S  + +  T  VV S   
Sbjct: 188 WSAMQSSVELGRDIGNSVIKCLVFAITVTWIALFNGYDAIPTSEGISQATTRTVVHSSLA 247

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 248 VLGLDFVLTALMFG 261


>gi|315125511|ref|YP_004067514.1| ABC transporter membrane protein [Pseudoalteromonas sp. SM9913]
 gi|315014024|gb|ADT67362.1| ABC transporter membrane protein [Pseudoalteromonas sp. SM9913]
          Length = 259

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 81/264 (30%), Positives = 132/264 (50%), Gaps = 8/264 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             +L   IG K +        +   LG               FK     L+RQ+Y VG  
Sbjct: 1   MLDLLQKIGHKTL-------GRFAALGRSTQMLASALWHVPNFKKGTPLLVRQLYMVGSQ 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++++     G V+A QG   L  +GAE     L+++  LRE+G ++TA++ AGR+GS
Sbjct: 54  SLLIIVVSGLFIGMVLALQGYTVLVDYGAEDSLGPLVALSLLRELGPVVTALLFAGRAGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+P+L ++ +  AIIGA +V 
Sbjct: 114 ALTAEIGLMKATEQLSSLEMMAIDPLRRIIAPRFWAGLISMPMLALIFSAVAIIGAHLVG 173

Query: 287 WKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
             +  +    F+S   S  +   +I  GLIK+   A  +  +A+ +G+     S  + K 
Sbjct: 174 VDWLGVDTGSFWSIMQSQVSFEKDILNGLIKSIVFAIVVTWIALYKGYDCVPTSEGISKA 233

Query: 346 VTTCVVQSISIVIIIDSLFAIFYF 369
            T  VV S   V+  D +     F
Sbjct: 234 TTETVVHSSLAVLGFDFILTAVMF 257


>gi|85858832|ref|YP_461034.1| organic solvents resistance ABC transporter permease [Syntrophus
           aciditrophicus SB]
 gi|85721923|gb|ABC76866.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Syntrophus aciditrophicus
           SB]
          Length = 259

 Score =  240 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 76/265 (28%), Positives = 131/265 (49%), Gaps = 7/265 (2%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
                    +G++I+  + +        G +I       A +++    L  + +QM +VG
Sbjct: 2   GILTAFADSLGRRILHGVEEM-------GRIILLFLSVVAWTFRPPLRLRLIFKQMEFVG 54

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
           V  + VV+L    TG V+A QG      F AE      +++   RE+G +LT++M+  R+
Sbjct: 55  VKSIFVVVLTGAFTGMVMALQGYHGFKMFSAESLVGATVALGMTRELGPVLTSLMVTARA 114

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           GSA+ AE+G+M++ E+IDA+  M  + ++ LI PR+ A I+ LPLLT++++F  I+G   
Sbjct: 115 GSAMAAELGTMRVTEQIDALYVMAANPIQHLIVPRMIASILMLPLLTVVSDFVGILGGYF 174

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
           V     +I   VF         L +I+ GLIKA      + ++   +GF     +  +G+
Sbjct: 175 VGVSVLNINEGVFVKNITRIVELGDIYNGLIKAACFGLILSLIGCYKGFHARGGAEGVGR 234

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYF 369
             T  VV S   +++ D       F
Sbjct: 235 ATTEAVVLSSISILVGDYFLTAIMF 259


>gi|317484538|ref|ZP_07943446.1| hypothetical protein HMPREF0179_00797 [Bilophila wadsworthia 3_1_6]
 gi|316924199|gb|EFV45377.1| hypothetical protein HMPREF0179_00797 [Bilophila wadsworthia 3_1_6]
          Length = 388

 Score =  240 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 86/377 (22%), Positives = 162/377 (42%), Gaps = 11/377 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEI---ADDVVMAINKSIQSDSAIVDLSA--ITEIDTIGAE 56
           S  G+    F+G WK   +        D  +   + +  ++  V+L    + E D+    
Sbjct: 18  SSEGVLRVIFSGEWKRDLLGPNFFTERDEALRETERLLKEARSVELLGEALGEWDSG--- 74

Query: 57  LIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116
            ++    +     K   +     +L   I    +  +       +            +G 
Sbjct: 75  -VLVVTTRLVTLAKEHNIPLDDARLPEGIRNLTKLALAVPPNTAAQRKAQKTTFLERVGG 133

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
             +     +C     +G ++ + G               L  Q    GV  +P+V LIS 
Sbjct: 134 FTLAVPRMACDIFDFIGELVLSAGRLFRGRSSCTPGNAWLAVQ--ESGVDALPIVSLISL 191

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
           + G ++A  G  QL  FGAEI+   L+++   R +G ++T +++AGR+G++  A IG+M+
Sbjct: 192 LVGLILAFVGVIQLKMFGAEIYVSSLVAVSMTRIMGAIMTGIILAGRTGASYAAVIGTMQ 251

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           +NEEIDA+ T+G+     LI PR+ AL    PLL + ++F  I+G  IV      +    
Sbjct: 252 VNEEIDALTTLGVAPSDYLIMPRVLALTAMTPLLVLYSDFMGIMGGFIVGVGILGLDPME 311

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +++       + N++ G++        I I    +G   G ++ ++GK  T+ VV SI  
Sbjct: 312 YYTFTQKGFNINNLWVGMVHGAVYGMLIAITGCYQGLRCGRNAEAVGKATTSAVVYSIVG 371

Query: 357 VIIIDSLFAIFYFAIGI 373
           +++  ++  I    + I
Sbjct: 372 IVLSTAVLTILCNILNI 388


>gi|238650558|ref|YP_002916410.1| ABC transporter permease protein [Rickettsia peacockii str. Rustic]
 gi|238624656|gb|ACR47362.1| ABC transporter permease protein [Rickettsia peacockii str. Rustic]
          Length = 259

 Score =  240 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 71/265 (26%), Positives = 137/265 (51%), Gaps = 7/265 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N+   +GK+ VKF     S +         +    +S  +   +L  +IRQ+ ++G  
Sbjct: 2   LFNIANSVGKRTVKFAQSVGSFSLF-------SFAAVSSIIRPPLYLSLIIRQLLFIGFH 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PVV + +F +GAV+A Q     S+F AE     ++ +   RE+G +L  +M+AGR G+
Sbjct: 55  SLPVVAMTTFFSGAVLALQSYIGFSRFSAESSIATVVVLSLTRELGPVLAGLMVAGRVGA 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           +I AEI +M++ E++DA+ T+  D ++ L+ PR+   II++P L ++ +   ++G  +V 
Sbjct: 115 SIAAEIATMRVTEQVDALYTLSTDPIKYLVFPRVITAIITMPCLVLIGDIIGVMGGYLVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
               D   A + +         ++ +GL+KA      I I++   G+  G  +  +G+  
Sbjct: 175 VYKLDFNSAAYLTSTFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRAT 234

Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371
           T+ VV +  +++I + L    +F +
Sbjct: 235 TSAVVNASILILISNYLITELFFKV 259


>gi|114777488|ref|ZP_01452485.1| ABC-type transport system involved in resistance to organic
           solvents [Mariprofundus ferrooxydans PV-1]
 gi|114552270|gb|EAU54772.1| ABC-type transport system involved in resistance to organic
           solvents [Mariprofundus ferrooxydans PV-1]
          Length = 257

 Score =  240 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 80/239 (33%), Positives = 125/239 (52%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +GL  S               L  L++Q   VGV  +PVV+L +  TG V+A Q      
Sbjct: 19  IGLYASTFAGTVRRMSSRPWHLRMLLQQAEEVGVQSLPVVMLTALFTGMVLALQSYIVFH 78

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           +F AE  +  ++S+  +RE+G +L  +M+AGR G+A  AE+G+M++ E+IDA+ T+  D 
Sbjct: 79  RFAAESLTGLVVSMSLVRELGPVLVGLMVAGRVGAAFAAELGTMRVTEQIDALWTLSTDP 138

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           VR LI PR+ A+ + +PLL ++A+F  I G   +     D   +V+         L++ +
Sbjct: 139 VRYLIMPRLIAVTLMMPLLVVVADFIGIYGGYAISIYLLDQNPSVYIENTTQYMELSDFY 198

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           TGL+KA F    IGI+   EGF     +  +G   T  VV S   ++I D     + FA
Sbjct: 199 TGLVKAGFFGILIGIIGCTEGFNCKGGAAGVGTATTRAVVISCMSILISDYFLTAWMFA 257


>gi|254284160|ref|ZP_04959128.1| ABC transporter permease protein [gamma proteobacterium NOR51-B]
 gi|219680363|gb|EED36712.1| ABC transporter permease protein [gamma proteobacterium NOR51-B]
          Length = 377

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 95/365 (26%), Positives = 171/365 (46%), Gaps = 15/365 (4%)

Query: 11  FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME--KYHGK 68
             G+W+S  +     ++           +  VD   +   D+    L++      +  G 
Sbjct: 26  LKGSWESSAVLP---ELGALFQPDDTVTALRVDALEVARWDSRLISLLLKLHRYCESRGI 82

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
                +     QL +L            +        +       +G ++  F+N     
Sbjct: 83  SITTELPEGASQLLALAVAVPPAVESPSQSAGWLHSLNPLPYLERLGARVTDFLN----- 137

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G ++S+TG       + +  +  L+   Y  G + +P++ L S + G ++   GA 
Sbjct: 138 --FVGSLVSSTGRVVTG--RGRVRVSDLLAFAYQTGPNALPIIGLTSLLVGMILGYLGAV 193

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           QL QFGA IF  DL++I  LRE+G L+TA++IAGR+G+A  A++G+M++NEE+DAI  +G
Sbjct: 194 QLQQFGAGIFVADLVTIGVLREMGALMTAIIIAGRTGAAYAAQLGTMRVNEEVDAIEILG 253

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +  +  L+ PR+ A+ + +PLL++ A    I+G  IV      I    ++++  ++  L 
Sbjct: 254 ISLMDFLVLPRVLAVTLMVPLLSLYAAIMGIVGGGIVSIS-LGITPLQYWTQAQTSLGLD 312

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           ++  GL KA      IGI   + G   G  S  +GK  TT VV ++  +I+ D+   +  
Sbjct: 313 HLLVGLSKALLFGALIGIAGCRAGMQSGRSSEGVGKATTTAVVVALVYLILADAAVNLLC 372

Query: 369 FAIGI 373
             +GI
Sbjct: 373 QLLGI 377


>gi|325294995|ref|YP_004281509.1| hypothetical protein Dester_0809 [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065443|gb|ADY73450.1| protein of unknown function DUF140 [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 260

 Score =  240 bits (612), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 77/260 (29%), Positives = 132/260 (50%), Gaps = 7/260 (2%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
            L   IG+  + F+    S   I    +           +FK +L     Q+  +G   +
Sbjct: 3   KLLEAIGRVTINFLEFWGSWLII---SVKAIVLAFRKPIRFKHYL----YQLASIGTGSL 55

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
           PV+ + S  TG VIA +      +F AE     +++I   RE+G +LTA++I  RSGSA+
Sbjct: 56  PVIAITSLFTGGVIALETYEAFHRFNAEYMIGGVVAISMARELGPVLTALLITARSGSAM 115

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG+MK+ E+IDA+R M ++ ++ LI+PR++  +I++ LLTI+++    IG  IV   
Sbjct: 116 AAEIGTMKVTEQIDALRMMAVNPIKYLITPRVYTSVIAVTLLTIISDIVGYIGGYIVSVV 175

Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
            ++I   ++     + A + +++ GLIKA      I  ++   G+     +  +G+  T 
Sbjct: 176 VFNINKTLYIRYTQNLAEMNDVYHGLIKAAIFGFLIATISCLYGYFTKGGAKGVGESTTK 235

Query: 349 CVVQSISIVIIIDSLFAIFY 368
            VV S   ++I D L     
Sbjct: 236 AVVVSSISILIFDYLITFIL 255


>gi|269104097|ref|ZP_06156794.1| uncharacterized ABC transporter permease component YrbE
           [Photobacterium damselae subsp. damselae CIP 102761]
 gi|268163995|gb|EEZ42491.1| uncharacterized ABC transporter permease component YrbE
           [Photobacterium damselae subsp. damselae CIP 102761]
          Length = 260

 Score =  239 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 76/265 (28%), Positives = 133/265 (50%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             +    IG++ +         + +L       G         K F L L++Q+Y VGV 
Sbjct: 2   ITDFIAAIGRRTLNLCKTVGRASLML------YGALICKPQPRKMFPL-LLKQLYSVGVL 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++++     G V++ QG   L  FGAE     ++++  LRE+G ++TA++ AGR+GS
Sbjct: 55  SIAIILVSGLFIGMVLSLQGYIVLVDFGAETSLGQMVALSLLRELGPVVTALLFAGRAGS 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+PLL ++     I G  +V 
Sbjct: 115 ALTAEIGLMKATEQLSSMEMMAVDPLRRVIAPRFWAGVISMPLLAMMFTAVGIWGGQLVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
             +  I +  ++S   S+  +  +I  GL+KA   A  +  +A+  G+     S  + + 
Sbjct: 175 VDWKGIDYGSYWSVMQSSVDVWYDIGNGLLKAVVFAITVTWIAVFNGYDAVPTSEGISRA 234

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV S   V+ +D +     F 
Sbjct: 235 TTRTVVNSSLAVLGLDFVLTALMFG 259


>gi|27364141|ref|NP_759669.1| ABC transporter permease YrbE [Vibrio vulnificus CMCP6]
 gi|320157526|ref|YP_004189905.1| ABC transporter permease YrbE [Vibrio vulnificus MO6-24/O]
 gi|27360259|gb|AAO09196.1| Uncharacterized ABC transporter, permease component YrbE [Vibrio
           vulnificus CMCP6]
 gi|319932838|gb|ADV87702.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           vulnificus MO6-24/O]
          Length = 262

 Score =  239 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 72/254 (28%), Positives = 125/254 (49%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I        S     G          A   + +  L  L++Q+Y VGV  + ++++    
Sbjct: 8   ISALGRRFLSLCQSFGKASLMLAGALAGRPQPRKTLPLLVKQIYNVGVQSLAIIVVSGLF 67

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 68  IGMVLSLQGYVILVDYGAEGSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 127

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D ++ +I+PR+WA IIS+PLL ++     I G  +V   +  I    F
Sbjct: 128 TEQLSSMEMMAVDPLKRIIAPRLWAGIISMPLLAMIFMAVGIWGGQLVGVDWKGIDHGSF 187

Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   ++  L  +I   +IK    A  +  +A+  G+     S  + +  T  VV S   
Sbjct: 188 WSAMQASVELGQDIGNSMIKCVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLA 247

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 248 VLGLDFVLTALMFG 261


>gi|224418846|ref|ZP_03656852.1| toluene ABC transporter permease [Helicobacter canadensis MIT
           98-5491]
          Length = 375

 Score =  239 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 106/375 (28%), Positives = 183/375 (48%), Gaps = 18/375 (4%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINK-SIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +N I + + +G W      +I   +++ ++   + +    ++L+   ++D  G E++  +
Sbjct: 13  DNDIYILKLSGLWDY----KIPKSLLLRLDSIKLTNVKIKIELAENFDLDFCGGEILERW 68

Query: 62  MEKYHGK-IKLQGV---STHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
           +     K I L+      +  +Q+F +++         + P +      F  LH+   + 
Sbjct: 69  ILALESKNIVLENALKNHSKSQQIFQILAT-------RKNPLKQDMVQDFIKLHWDSFQI 121

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I  F  DS       G ++             +  L + +  +    V  + +V L  F+
Sbjct: 122 IKGFFKDSLMAIGFFGEILYAWFSSLLQPKNIR--LKATLYCIQESLVKAIGIVALACFL 179

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G VIA QG+ QL QFGA I  +++ S+L LRE+  ++TA++IAGRS SA  AEIG M+ 
Sbjct: 180 IGIVIAYQGSIQLGQFGASILIVEMSSMLTLREMAPIITAIIIAGRSASAFSAEIGMMRA 239

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            +EIDA+R MG D +  L+ PR+ AL + LPL+  +A+   ++GA +V      I    F
Sbjct: 240 TQEIDAMRVMGFDPITFLVLPRMLALCLVLPLVVFIADLFGLLGAMLVCQLQLGIGTEQF 299

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
             RF     + + + G+ KAPF    I  V    GF V   + S+G   T  VV+SI +V
Sbjct: 300 VERFLQVVDMRHFWVGIAKAPFFGLIISFVGCFHGFIVAKDTRSIGVHTTKSVVESIFLV 359

Query: 358 IIIDSLFAIFYFAIG 372
           I  D+L ++ +  +G
Sbjct: 360 IAFDALCSVVFTEMG 374


>gi|77361458|ref|YP_341033.1| ABC transporter membrane protein [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76876369|emb|CAI87591.1| putative transport protein (ABC superfamily, membrane)
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 260

 Score =  239 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 82/264 (31%), Positives = 134/264 (50%), Gaps = 8/264 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N    IG K +         A++L   + +          FK     LIRQ+Y VG  
Sbjct: 2   MLNFLQKIGHKTLGRFAALGRSANMLFGALVHI-------PNFKKGTPLLIRQLYMVGSQ 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++++     G V+A QG   L  +GAE     L+++  LRE+G ++TA++ AGR+GS
Sbjct: 55  SLLIIVVSGLFIGMVLALQGYTVLVGYGAEDSLGPLVALSLLRELGPVVTALLFAGRAGS 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++ ++  M +D ++ +I+PR WA +IS+PLL ++ +  AIIGA +V 
Sbjct: 115 ALTAEIGLMKATEQLSSLEMMAIDPLKRIIAPRFWAGLISMPLLALIFSAVAIIGAHLVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
             +  +    F+S   S  +   +I  G+IK+   A  +  +A+ +G+     S  + K 
Sbjct: 175 VDWLGVDTGSFWSIMQSQVSFQQDILNGIIKSVVFAIVVTWIALYKGYDCVPTSEGISKA 234

Query: 346 VTTCVVQSISIVIIIDSLFAIFYF 369
            T  VV S   V+  D L     F
Sbjct: 235 TTETVVHSSLAVLGFDFLLTAVMF 258


>gi|37678640|ref|NP_933249.1| ABC-type transport system, permease component [Vibrio vulnificus
           YJ016]
 gi|37197380|dbj|BAC93220.1| ABC-type transport system, permease component [Vibrio vulnificus
           YJ016]
          Length = 262

 Score =  239 bits (611), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 71/251 (28%), Positives = 124/251 (49%), Gaps = 1/251 (0%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
                 S     G          A   + +  L  L++Q+Y VGV  + ++++     G 
Sbjct: 11  LGRRFLSLCQSFGKASLMLAGALAGRPQPRKTLPLLVKQIYNVGVQSLAIIVVSGLFIGM 70

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK  E+
Sbjct: 71  VLSLQGYVILVDYGAEGSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQ 130

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           + ++  M +D ++ +I+PR+WA IIS+PLL ++     I G  +V   +  I    F+S 
Sbjct: 131 LSSMEMMAVDPLKRIIAPRLWAGIISMPLLAMIFMAVGIWGGQLVGVDWKGIDHGSFWSA 190

Query: 301 FHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
             ++  L  +I   +IK    A  +  +A+  G+     S  + +  T  VV S   V+ 
Sbjct: 191 MQASVELGQDIGNSMIKCVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLAVLG 250

Query: 360 IDSLFAIFYFA 370
           +D +     F 
Sbjct: 251 LDFVLTALMFG 261


>gi|303327433|ref|ZP_07357874.1| ABC transporter, permease protein [Desulfovibrio sp. 3_1_syn3]
 gi|302862373|gb|EFL85306.1| ABC transporter, permease protein [Desulfovibrio sp. 3_1_syn3]
          Length = 375

 Score =  239 bits (611), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 81/373 (21%), Positives = 153/373 (41%), Gaps = 8/373 (2%)

Query: 2   SENGITVFR-FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           S  G        G W   E      D  +A     +     ++ + +   DT     ++ 
Sbjct: 10  SAQGPLWLVSVGGRWNMEEPWPEEADAALAGIADQRVRELRLEANGLGRWDTSLLVFLVQ 69

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
            ++    +     ++     L   +             + +    S       +G   + 
Sbjct: 70  MVKAARARKLDVDLA-----LPEGLERLLHMAFAVPAQEGAARKKSDATFLSGLGDAALS 124

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
                       G V  +         K +      +  MY  GV  +P++ + S + G 
Sbjct: 125 LPPTVGDFLSFCGEVTLSIWRLFLGRSKMRS--QDFVAAMYECGVQALPIISVTSMLFGL 182

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           ++A  GA QL+QFGA+I+   L+ I  LR +G ++  V+++GR G+A  A IG+M++NEE
Sbjct: 183 ILAFVGAVQLTQFGAQIYVAGLVGIGMLRVMGAVMVGVVMSGRVGAAYAALIGTMQVNEE 242

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +DA+ T+G+  V  L+ PR+ AL   +PLLT+ A+   ++G  +V     D+    + + 
Sbjct: 243 VDALATLGISPVDFLVLPRVLALTAMVPLLTLYADLMGVLGGYLVGVMMLDLNPMEYINA 302

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                   ++  GL+        I +    +G   G  + ++G+  TT VV SI  +I+ 
Sbjct: 303 TTQMVPFKHVLIGLVYGTVFGVVIAVAGCYQGMRCGRSAQAVGQATTTAVVHSIVGIIVA 362

Query: 361 DSLFAIFYFAIGI 373
            +   +    +G+
Sbjct: 363 TAAITVICNVLGV 375


>gi|291532196|emb|CBL05309.1| conserved hypothetical integral membrane protein [Megamonas
           hypermegale ART12/1]
          Length = 256

 Score =  239 bits (610), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 70/263 (26%), Positives = 127/263 (48%), Gaps = 9/263 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
                  IG+ ++  +        ++G  I+          ++   +  + +QM ++GV 
Sbjct: 2   IIRFFEKIGRFVIGHLETLGQFTILIGNTIAQL--------RYPPRMRHVFQQMSHLGVD 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +P++ L    TG VI  Q A +  + GA+     +++I   RE+G +L  V+ AGR G+
Sbjct: 54  TLPIITLTMLFTGMVITLQTATEFIRLGAQSTVGGIVTIAVGRELGPVLAGVVTAGRVGA 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           AI AEI +MK+ E+IDA++ M  + +  L+ PR+ A +  LP+L +  +    IG  +V 
Sbjct: 114 AITAEISTMKVTEQIDALKVMATNPIGYLVVPRLIACMFMLPILVVFGDVIGSIGGWMVA 173

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
            +YYDI   ++     +   + +I  GL+K+      I IV    G      +  +GK  
Sbjct: 174 -EYYDINIYMYLHSIDTFVDVHDITGGLLKSIVFGAIIAIVGCYYGLNAQNGAEGVGKAT 232

Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369
           T  VV SI ++   + L ++  +
Sbjct: 233 TRSVVISIIVIFFSNCLLSMLLY 255


>gi|149907972|ref|ZP_01896640.1| membrane protein, putative [Moritella sp. PE36]
 gi|149808978|gb|EDM68909.1| membrane protein, putative [Moritella sp. PE36]
          Length = 262

 Score =  239 bits (610), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 81/266 (30%), Positives = 140/266 (52%), Gaps = 12/266 (4%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G+  +  +         L   I +     +  ++++     +I Q+Y++G   +
Sbjct: 4   NPFAQLGRATLALLQGFGKATLFL---IHSVVHMFSRPWQWR----RVIEQLYFIGAKSI 56

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            V+ +    TG V+  QG + LS+FG+       +++  +RE+G +LTA+MI GR+GSA+
Sbjct: 57  IVICVTGLFTGMVLGLQGYYTLSKFGSTGLLGSAVALTLIRELGPVLTAIMIIGRAGSAM 116

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG M+I+E+IDA++TM +D +R L+SPRI A +IS PLLT + +   I G  +   +
Sbjct: 117 TAEIGIMRISEQIDALKTMTIDPIRFLVSPRIIAALISFPLLTAIFDTVGIFGGYLTGSQ 176

Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG-----VHSNSLG 343
              I  A +F R  S+  +A++  G IK+ F +  +  V    G+          +  +G
Sbjct: 177 LLGINPATYFYRVESSVIMADVAGGFIKSIFFSITVITVCCYHGYYTHIRRDNFGAKGVG 236

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYF 369
              TT VVQ+  +V++ID +   F  
Sbjct: 237 LSTTTAVVQASILVLVIDYILTTFLL 262


>gi|332038535|gb|EGI74978.1| uncharacterized ABC transporter, permease component YrbE
           [Pseudoalteromonas haloplanktis ANT/505]
          Length = 259

 Score =  239 bits (610), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 78/251 (31%), Positives = 129/251 (51%), Gaps = 1/251 (0%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           K  + +  +   LG          A    FK     L+RQ+Y VG   + ++++     G
Sbjct: 7   KLGHKTLGRFAALGRSAYMLFSALAHVPNFKKGTPLLVRQLYMVGSQSLLIIMVSGLFIG 66

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A QG   L  +GAE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG MK  E
Sbjct: 67  MVLALQGYTVLVGYGAEDSLGPLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATE 126

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++ ++  M +D ++ +I+PR WA  IS+PLL ++ +  AIIGA +V   +  +    F+S
Sbjct: 127 QLSSLEMMAIDPLKRIIAPRFWAGFISMPLLALIFSAVAIIGAHLVGVDWLGVDTGSFWS 186

Query: 300 RFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
              S  +   +I  G+IK+   A  +  +A+ +G+     S  + K  T  VV S   V+
Sbjct: 187 IMQSQVSFQQDILNGIIKSFVFAIVVTWIALYKGYDCVPTSEGISKATTETVVHSSLAVL 246

Query: 359 IIDSLFAIFYF 369
             D +     F
Sbjct: 247 GFDFILTAVMF 257


>gi|260772164|ref|ZP_05881081.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           metschnikovii CIP 69.14]
 gi|260613031|gb|EEX38233.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           metschnikovii CIP 69.14]
          Length = 263

 Score =  239 bits (610), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 74/256 (28%), Positives = 125/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + I +F           G              +    L  L++Q+Y VGV  + ++I+  
Sbjct: 7   QAISRFGRRCLGVGESFGRASLMLFGALVGRPRPIQHLPLLMKQLYSVGVQSLAIIIVSG 66

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V++ QG   L  FGAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 67  LFIGMVLSLQGYVILVDFGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 126

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D ++ +I+PR+WA +IS+PLL ++     I G  +V   +  I   
Sbjct: 127 KATEQISSLEMMAVDPLKRIIAPRLWAGLISMPLLAMIFMAVGIWGGHLVGVDWKGIDQG 186

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   S+  L  +I   +IK    A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 187 SFWSVMQSSVELGRDIGNSVIKCVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 246

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 247 LAVLALDFVLTALMFG 262


>gi|114563133|ref|YP_750646.1| hypothetical protein Sfri_1962 [Shewanella frigidimarina NCIMB 400]
 gi|114334426|gb|ABI71808.1| protein of unknown function DUF140 [Shewanella frigidimarina NCIMB
           400]
          Length = 370

 Score =  239 bits (610), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 88/371 (23%), Positives = 174/371 (46%), Gaps = 11/371 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
            +   +   AG+W+  + + +  D+   +  + QS + I   + ++  D+  A  ++   
Sbjct: 11  HDDNCLLNLAGDWQLGQ-APLGADICAELPSNCQSITLI--TTELSHWDSSLAIALLQLS 67

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                + +   + T                +   +P       +   L   + + ++K  
Sbjct: 68  R--WCEQQKISLDTQQTPQGLQQLLQLATDVPVYQPTND---GAIGGLWPTLRRSLIKQG 122

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                    +G      G +     + +     +I  +   G  G+ +V LIS + G ++
Sbjct: 123 LQVHDGLVFVGDCTLVLGRWLGGKARTRR--SDIIFFIEQAGPKGLAIVTLISLLVGMIL 180

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A  G+ QL Q GA+++  +L++I  +RE+G L+T V++AGR+G+A  A++G+M++NEEID
Sbjct: 181 AYLGSVQLRQLGAQVYVANLVAIGMVREMGALMTGVIMAGRTGAAYAAQLGTMQVNEEID 240

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R MG+  +  L+ PR+ ALI  +PL+ I ++   ++G ++V      + +  +  +  
Sbjct: 241 ALRVMGIPTMEFLVLPRLLALIFIMPLMCIYSDVIGMLGGALVANGM-GVSYTQYILQTQ 299

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
                 +I TGLIK+      I I   + G   G  SN++G   T  VV++I  +++ D+
Sbjct: 300 VAIDWVDISTGLIKSLIFGFLIAIAGCQAGLLCGRDSNAVGLATTHAVVKAIVFLVVADA 359

Query: 363 LFAIFYFAIGI 373
              I Y  +GI
Sbjct: 360 ALNILYDKLGI 370


>gi|254480123|ref|ZP_05093371.1| conserved domain protein [marine gamma proteobacterium HTCC2148]
 gi|214039685|gb|EEB80344.1| conserved domain protein [marine gamma proteobacterium HTCC2148]
          Length = 376

 Score =  239 bits (610), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 99/375 (26%), Positives = 177/375 (47%), Gaps = 14/375 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            +  + V    G+W   +       +   +   I +   +VD S +   D++    ++  
Sbjct: 13  EDREVAVLLLTGDWVQGQSHRDFHVLKDDL-LGITASELVVDGSQLGLWDSVLMAFLLQS 71

Query: 62  MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
             +        + + +   IE+L  + +        +   ++ +   S  +L   + +  
Sbjct: 72  FNQCREDNIVFRTRALPDGIERLLDVATAVPTHVPPSAPNKQWYESFSPGSLVLELWEST 131

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           V+ +         L  +    G+       F+ F        Y  G     ++ L S + 
Sbjct: 132 VESLAFIGELGIALWRL--ALGKANTRFSDFRTF-------CYQAGPDAFAIISLTSVLV 182

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G ++A  GA QL QFGAE++  DL+ I  LRE+GVL+ A+++AGR+G+A  A++G+M+ N
Sbjct: 183 GMILAYLGAVQLQQFGAEVYVADLVVIGMLREMGVLMAAIVMAGRTGAAYAAQLGTMQAN 242

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDAIRTMG+  +  L+ PR+ AL++++PLLT+ AN   IIG  IV       P  ++ 
Sbjct: 243 EEIDAIRTMGISPMEFLVVPRMLALVVAMPLLTLYANLLGIIGGGIVSGGLGVTPL-MYI 301

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           S   +   L+++  GLIK+      I +   + G   G  S ++G+  T  VV +I  +I
Sbjct: 302 SEGETALQLSHLSVGLIKSVVFGVLIAVAGCRSGINSGRSSAAVGQAATQAVVTAIVYLI 361

Query: 359 IIDSLFAIFYFAIGI 373
           + D+   I +  +GI
Sbjct: 362 VADAAINILFQQVGI 376


>gi|288962766|ref|YP_003453060.1| ABC transport system permease protein [Azospirillum sp. B510]
 gi|288915032|dbj|BAI76516.1| ABC transport system permease protein [Azospirillum sp. B510]
          Length = 258

 Score =  238 bits (609), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 67/262 (25%), Positives = 128/262 (48%), Gaps = 7/262 (2%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
                 G+  + F+  +   A   G  +S+         +   +   ++RQM  +G   +
Sbjct: 2   GFLAATGRAFLIFLEATGRLALFTGSALSHC-------VRPPLYPRQILRQMIDIGYYSL 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
           PVV L +  TG V+A Q     S+F AE     ++ +   RE+G +L  +M+AGR G+A+
Sbjct: 55  PVVGLTALFTGMVLALQSYSGFSRFQAEGAIATVVVLSITRELGPVLAGLMVAGRIGAAM 114

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG+M++ E+IDA+ T+  +  + L++PR+ A +  +PLL ++A+   + G  +V   
Sbjct: 115 AAEIGTMRVTEQIDALSTLSTNPYKYLVAPRLIAGLTMVPLLVVVADIIGVFGGFLVGVY 174

Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             D   A + +R        ++ +GL+KA      I ++    G+     +  +G   T 
Sbjct: 175 RLDFNAASYINRTWEFLQPVDVISGLVKAAIFGFLIALMGCYHGYHSKGGAQGVGAATTN 234

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +  ++++ + L    +F+
Sbjct: 235 AVVSASIMILVWNYLITGLFFS 256


>gi|51473253|ref|YP_067010.1| ABC transporter permease protein [Rickettsia typhi str. Wilmington]
 gi|81390296|sp|Q68XW4|Y041_RICTY RecName: Full=Probable ABC transporter permease protein RT0041
 gi|51459565|gb|AAU03528.1| ABC transporter permease protein [Rickettsia typhi str. Wilmington]
          Length = 259

 Score =  238 bits (609), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 71/265 (26%), Positives = 135/265 (50%), Gaps = 7/265 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N+   +GK  +KF       A         +    +S  K   +L  ++RQ+ ++G  
Sbjct: 2   LLNIANLVGKHTIKFAQSVGIFALF-------SFIAISSIIKPPLYLSLIMRQLLFIGFH 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PVV + +F +GAV+A Q     S+F AE     ++ +   RE+G +L  +++AGR G+
Sbjct: 55  SLPVVAMTTFFSGAVLALQSYTGFSRFSAENSIATVVVLSLTRELGPVLAGLIVAGRVGA 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           +I AEI +MK+ E++DA+ T+  D ++ L+ PR+ A II++P L ++ +   ++G  +V 
Sbjct: 115 SIAAEIATMKVTEQVDALYTLSTDPIKYLVCPRVIAAIITMPCLVLIGDVIGVMGGYLVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
               +     + +       L ++ +GL+KA      I I++   G+  G  +  +G+  
Sbjct: 175 IYKLNFNSTAYLTSTFQYLELIDVISGLVKATVFGFIISIISCYSGYYSGKGAKGVGRAT 234

Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371
           T+ VV S  +++I + L     F +
Sbjct: 235 TSAVVNSSILILISNYLITELLFKV 259


>gi|327479601|gb|AEA82911.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas
           stutzeri DSM 4166]
          Length = 265

 Score =  238 bits (608), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 70/255 (27%), Positives = 131/255 (51%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           +I             LG                +     L++Q+Y VGV  + +V++   
Sbjct: 9   RIALLGRAGLDVLAALGRSTIFLVHVLFGRSGLRNGFSLLVKQLYSVGVLSLAIVVVSGI 68

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   LS +G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+MK
Sbjct: 69  FIGMVLALQGYNILSSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALAAEIGNMK 128

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  +G+D ++ +I+PR+WA  ISLPLLT++ N   I G ++V   +  +    
Sbjct: 129 STEQLSSLEMIGVDPLKYIIAPRLWAGFISLPLLTLIFNVVGIWGGAMVAVDWLGVYEGS 188

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F++   ++    +++  G+IK+   A  +  +A+ +G+     S  + +  T  VV +  
Sbjct: 189 FWANMQNSVDFHSDVLNGVIKSVVFALVVTWIAVFQGYDCEPTSEGISRATTRTVVYASL 248

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 249 AVLGLDFILTALMFG 263


>gi|253828165|ref|ZP_04871050.1| inner membrane protein yrbE [Helicobacter canadensis MIT 98-5491]
 gi|313142364|ref|ZP_07804557.1| ABC transporter [Helicobacter canadensis MIT 98-5491]
 gi|253511571|gb|EES90230.1| inner membrane protein yrbE [Helicobacter canadensis MIT 98-5491]
 gi|313131395|gb|EFR49012.1| ABC transporter [Helicobacter canadensis MIT 98-5491]
          Length = 371

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 106/375 (28%), Positives = 183/375 (48%), Gaps = 18/375 (4%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINK-SIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +N I + + +G W      +I   +++ ++   + +    ++L+   ++D  G E++  +
Sbjct: 9   DNDIYILKLSGLWDY----KIPKSLLLRLDSIKLTNVKIKIELAENFDLDFCGGEILERW 64

Query: 62  MEKYHGK-IKLQGV---STHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
           +     K I L+      +  +Q+F +++         + P +      F  LH+   + 
Sbjct: 65  ILALESKNIVLENALKNHSKSQQIFQILAT-------RKNPLKQDMVQDFIKLHWDSFQI 117

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I  F  DS       G ++             +  L + +  +    V  + +V L  F+
Sbjct: 118 IKGFFKDSLMAIGFFGEILYAWFSSLLQPKNIR--LKATLYCIQESLVKAIGIVALACFL 175

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G VIA QG+ QL QFGA I  +++ S+L LRE+  ++TA++IAGRS SA  AEIG M+ 
Sbjct: 176 IGIVIAYQGSIQLGQFGASILIVEMSSMLTLREMAPIITAIIIAGRSASAFSAEIGMMRA 235

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            +EIDA+R MG D +  L+ PR+ AL + LPL+  +A+   ++GA +V      I    F
Sbjct: 236 TQEIDAMRVMGFDPITFLVLPRMLALCLVLPLVVFIADLFGLLGAMLVCQLQLGIGTEQF 295

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
             RF     + + + G+ KAPF    I  V    GF V   + S+G   T  VV+SI +V
Sbjct: 296 VERFLQVVDMRHFWVGIAKAPFFGLIISFVGCFHGFIVAKDTRSIGVHTTKSVVESIFLV 355

Query: 358 IIIDSLFAIFYFAIG 372
           I  D+L ++ +  +G
Sbjct: 356 IAFDALCSVVFTEMG 370


>gi|119469173|ref|ZP_01612157.1| putative transport protein (ABC superfamily, membrane)
           [Alteromonadales bacterium TW-7]
 gi|119447425|gb|EAW28693.1| putative transport protein (ABC superfamily, membrane)
           [Alteromonadales bacterium TW-7]
          Length = 259

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 78/251 (31%), Positives = 129/251 (51%), Gaps = 1/251 (0%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           K  + +  +   LG          A    FK     L+RQ+Y VG   + ++++     G
Sbjct: 7   KLGHKTLGRFAALGRSAYMLFSALAHVPNFKKGTPLLVRQLYMVGSQSLLIIMVSGLFIG 66

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A QG   L  +GAE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG MK  E
Sbjct: 67  MVLALQGYTVLVGYGAEDSLGPLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATE 126

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++ ++  M +D ++ +I+PR WA  IS+PLL I+ +  AIIGA +V   +  +    F+S
Sbjct: 127 QLSSLEMMAIDPLKRIIAPRFWAGFISMPLLAIIFSAVAIIGAHLVGVDWLGVDTGSFWS 186

Query: 300 RFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
              S  +   ++  G+IK+   A  +  +A+ +G+     S  + K  T  VV S   V+
Sbjct: 187 IMQSQVSFQADVLNGIIKSFVFAIVVTWIALYKGYDCVPTSEGISKATTETVVHSSLAVL 246

Query: 359 IIDSLFAIFYF 369
             D +     F
Sbjct: 247 GFDFILTAVMF 257


>gi|146281424|ref|YP_001171577.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas
           stutzeri A1501]
 gi|145569629|gb|ABP78735.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas
           stutzeri A1501]
          Length = 265

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 70/255 (27%), Positives = 131/255 (51%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           +I             LG                +     L++Q+Y VGV  + +V++   
Sbjct: 9   RIALLGRAGLDVLAALGRSTIFLVHALFGRSGLRNGFSLLVKQLYSVGVLSLAIVVVSGI 68

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   LS +G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+MK
Sbjct: 69  FIGMVLALQGYNILSSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALAAEIGNMK 128

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  +G+D ++ +I+PR+WA  ISLPLLT++ N   I G ++V   +  +    
Sbjct: 129 STEQLSSLEMIGVDPLKYIIAPRLWAGFISLPLLTLIFNVVGIWGGAMVAVDWLGVYEGS 188

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F++   ++    +++  G+IK+   A  +  +A+ +G+     S  + +  T  VV +  
Sbjct: 189 FWANMQNSVDFHSDVLNGVIKSVVFALVVTWIAVFQGYDCEPTSEGISRATTRTVVYASL 248

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 249 AVLGLDFILTALMFG 263


>gi|78357028|ref|YP_388477.1| ABC transporter permease [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78219433|gb|ABB38782.1| ABC transporter permease protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
          Length = 373

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 91/372 (24%), Positives = 166/372 (44%), Gaps = 13/372 (3%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G  V  F G W   +       + + +    +  +     + +T  D+         +E 
Sbjct: 12  GRCVIVFQGRWTLHDTVPSVGKLALRLESDCRGGAVSFSCAGLTAWDSRFLTFCRSVLET 71

Query: 65  YHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
             G+       G+   + +L SL +    ++      +          L   +G+ +   
Sbjct: 72  LEGRGIAYDTSGLPDGVLRLLSLAAQVPEREGAAVSRKSP--------LSARMGEALHAA 123

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
              + S    +G V  +    C     F+         + + G   +P+V LIS + G +
Sbjct: 124 FAGTISVMEFIGDVTLSVLRMCIGRAVFR--WSDTFALLRFCGAQSLPIVSLISMLAGLI 181

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
            A  GA QL  FGAEI+   L+ I  LR +G ++TA++++GR G+A  AE+G+M++NEEI
Sbjct: 182 FAFVGAVQLKMFGAEIYVASLVGIAMLRVMGAVMTAIIVSGRVGAAFAAELGTMQVNEEI 241

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA  T G+  +  L+ PR+ AL++ +PLL + AN   I+G + V W   DI    +F+  
Sbjct: 242 DAFSTFGISPLDFLVLPRMLALVLMMPLLCVYANLMGIVGGAAVGWLMLDINLHQYFNMT 301

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
             T +L +   G+  +      + + +   G   G  ++++GK  T+ VV SI  +++  
Sbjct: 302 WQTVSLTHFGVGIAHSVVFGFVVAVCSCYMGIHCGRSASAVGKATTSAVVSSIVSIVVAT 361

Query: 362 SLFAIFYFAIGI 373
           ++       +GI
Sbjct: 362 AVITFLCNILGI 373


>gi|15223672|ref|NP_173410.1| TGD1 (TRIGALACTOSYLDIACYLGLYCEROL 1); lipid transporter
           [Arabidopsis thaliana]
 gi|42571555|ref|NP_973868.1| TGD1 (TRIGALACTOSYLDIACYLGLYCEROL 1); lipid transporter
           [Arabidopsis thaliana]
 gi|42571557|ref|NP_973869.1| TGD1 (TRIGALACTOSYLDIACYLGLYCEROL 1); lipid transporter
           [Arabidopsis thaliana]
 gi|75153743|sp|Q8L4R0|TGD1_ARATH RecName: Full=Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic;
           AltName: Full=ABC transporter I family member 14;
           Short=ABC transporter ABCI.14; Short=AtABCI14; Flags:
           Precursor
 gi|20465620|gb|AAM20141.1| unknown protein [Arabidopsis thaliana]
 gi|21281062|gb|AAM45069.1| unknown protein [Arabidopsis thaliana]
 gi|45680900|gb|AAS75319.1| permease-like protein [Arabidopsis thaliana]
 gi|222424205|dbj|BAH20061.1| AT1G19800 [Arabidopsis thaliana]
 gi|332191778|gb|AEE29899.1| trigalactosyldiacylglycerol 1 [Arabidopsis thaliana]
 gi|332191779|gb|AEE29900.1| trigalactosyldiacylglycerol 1 [Arabidopsis thaliana]
 gi|332191780|gb|AEE29901.1| trigalactosyldiacylglycerol 1 [Arabidopsis thaliana]
          Length = 350

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 55/232 (23%), Positives = 113/232 (48%)

Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198
            G+      K K    + ++Q+   G   + V +L S   G     Q   + ++ G    
Sbjct: 109 AGQVVLRILKGKIHWRNTLQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFTRLGLNRS 168

Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258
              ++++   RE+  ++T++++AGR GSA  AE+G+M+++E+ D +R +G D +  LI+P
Sbjct: 169 IGGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADPIDYLITP 228

Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318
           R+ A  ++LP LT++     +  ++++    Y I   +     H      +I + +IK+ 
Sbjct: 229 RVIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMDSAHRALRPWDIVSAMIKSQ 288

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                I +++   G      +  +G+  T+ VV S+  + I D + + F+F 
Sbjct: 289 VFGAIISVISCSWGVTTTGGAKGVGESTTSAVVMSLVGIFIADFVLSSFFFQ 340


>gi|88861156|ref|ZP_01135790.1| putative transport protein (ABC superfamily, membrane)
           [Pseudoalteromonas tunicata D2]
 gi|88816878|gb|EAR26699.1| putative transport protein (ABC superfamily, membrane)
           [Pseudoalteromonas tunicata D2]
          Length = 259

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 76/252 (30%), Positives = 134/252 (53%), Gaps = 1/252 (0%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           +   ++ ++   +G  +        S   F+     LI+Q+Y VG   + ++++     G
Sbjct: 7   QLGKETLNRFASVGRALMMLIGAIFSVPNFRKGTPLLIKQLYMVGFLSLMIIVVSGLFIG 66

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A QG   L  +GAE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG MK  E
Sbjct: 67  MVLALQGYTVLVDYGAEDSLGPLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATE 126

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++ ++  M +D ++ +I+PR WA IIS+PLL ++ +  AI+GA +V   +  I    F+S
Sbjct: 127 QLSSLEMMAIDPLKRIIAPRFWAGIISMPLLALIFSAVAILGAHLVGVDWLGIDSGSFWS 186

Query: 300 RFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
              +  +   +I  G+IK+   A  +  +A+ +G+     S  + K  T  VVQS   V+
Sbjct: 187 VMQAQVSFEKDILNGMIKSLVFAFVVTWIALYKGYFCIPTSEGISKATTETVVQSSLAVL 246

Query: 359 IIDSLFAIFYFA 370
             D +     F+
Sbjct: 247 GFDFVLTAVMFS 258


>gi|83591748|ref|YP_425500.1| hypothetical protein Rru_A0408 [Rhodospirillum rubrum ATCC 11170]
 gi|83574662|gb|ABC21213.1| Protein of unknown function DUF140 [Rhodospirillum rubrum ATCC
           11170]
          Length = 257

 Score =  237 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 63/262 (24%), Positives = 124/262 (47%), Gaps = 7/262 (2%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    IG+  + F+      +   G  +S+         +   F   + RQ+  +G   +
Sbjct: 2   NFLAIIGRVFLTFLRHVGRLSVFTGTALSHC-------VRPPFFPRLIGRQLVEIGYYSL 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
           PVV L +  TG V++ Q     ++F AE  +  ++ +   RE+G +L  +M+AGR G+A+
Sbjct: 55  PVVGLTAIFTGMVLSLQSHSGFARFSAEGATATVVVLSMTRELGPVLAGLMVAGRIGAAM 114

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG+MK+ E+IDA+ T+  +  + L+ PR+ A +  LP+L + A+   + G  ++   
Sbjct: 115 AAEIGTMKVTEQIDALTTLATNPYKYLVVPRLIAGVTMLPILVLTADIIGVFGGYLIGVY 174

Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
                 + + +         ++ +GL+KA      I ++    G      +  +G   T 
Sbjct: 175 KLGFNPSNYIASTWEFLEPMDVISGLVKASVFGFIIALMGCYHGSQSKGGAQGVGAATTN 234

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +  ++++ + +    +FA
Sbjct: 235 AVVSASILILVCNYMITELFFA 256


>gi|52425767|ref|YP_088904.1| hypothetical protein MS1712 [Mannheimia succiniciproducens MBEL55E]
 gi|52307819|gb|AAU38319.1| unknown [Mannheimia succiniciproducens MBEL55E]
          Length = 260

 Score =  237 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 74/266 (27%), Positives = 134/266 (50%), Gaps = 7/266 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             +L   +G+ ++  +        +L       G       + K     LI+Q+Y +GV 
Sbjct: 2   MVDLISALGRNVINSVKALGRAGFML------FGSLVGKP-QIKKHFPLLIKQLYVLGVQ 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + +++L  F  G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GS
Sbjct: 55  SLLIILLSGFFIGMVLGLQGYVILVDFAAEANVGQLVALSLLRELGPVVTALLFAGRAGS 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++ ++  M +D +R +I+PR WA +I++P+LT+L     IIG  ++ 
Sbjct: 115 ALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPVLTVLFTAVGIIGGHLIG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
            ++  I    F+S   +     +++ G IK+   A  +  +A+  G+     S  + +  
Sbjct: 175 VEWKGIDSGSFWSVMQNAVRTLDLWDGFIKSLVFAFTVTWIALFNGYDCIPTSEGISQAT 234

Query: 347 TTCVVQSISIVIIIDSLFAIFYFAIG 372
           T  VV +  +V+ +D +     F  G
Sbjct: 235 TRTVVNASLLVLGLDFVLTAIMFGAG 260


>gi|121727423|ref|ZP_01680551.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|229507423|ref|ZP_04396928.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae BX 330286]
 gi|229509652|ref|ZP_04399133.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae B33]
 gi|229516777|ref|ZP_04406223.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae RC9]
 gi|229606930|ref|YP_002877578.1| ABC transporter permease [Vibrio cholerae MJ-1236]
 gi|254851063|ref|ZP_05240413.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255744503|ref|ZP_05418455.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholera CIRS 101]
 gi|262154673|ref|ZP_06028799.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae INDRE 91/1]
 gi|262167549|ref|ZP_06035254.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae RC27]
 gi|262191035|ref|ZP_06049244.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae CT 5369-93]
 gi|297581366|ref|ZP_06943289.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|298500651|ref|ZP_07010455.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|121630195|gb|EAX62595.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|229345840|gb|EEO10812.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae RC9]
 gi|229353126|gb|EEO18065.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae B33]
 gi|229354928|gb|EEO19849.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae BX 330286]
 gi|229369585|gb|ACQ60008.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae MJ-1236]
 gi|254846768|gb|EET25182.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255738028|gb|EET93421.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholera CIRS 101]
 gi|262024002|gb|EEY42698.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae RC27]
 gi|262030513|gb|EEY49151.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae INDRE 91/1]
 gi|262033098|gb|EEY51627.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae CT 5369-93]
 gi|297534204|gb|EFH73042.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297540820|gb|EFH76877.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|327485006|gb|AEA79413.1| Uncharacterized ABC transporter, permease component YrbE [Vibrio
           cholerae LMA3894-4]
          Length = 263

 Score =  237 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 73/268 (27%), Positives = 129/268 (48%), Gaps = 8/268 (2%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
            N        +G++ +         + +L       G         + F L L+RQ+Y +
Sbjct: 2   LNDVMRWVSSVGQRTLAVSETFGRASLML------FGALVGRPQPIRHFPL-LVRQLYSI 54

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           GV  + ++I+     G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR
Sbjct: 55  GVQSLAIIIVSGLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGR 114

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           +GSA+ AEIG MK  E++ ++  M +D ++ +I+PR WA +IS+PLL ++     I G  
Sbjct: 115 AGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQ 174

Query: 284 IVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
           +V   +  I    F+S   ++  L  +I    IK    A  +  +A+  G+     S  +
Sbjct: 175 LVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGI 234

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            +  T  VV S   V+ +D +     F 
Sbjct: 235 SRATTRTVVHSSLAVLGLDFVLTALMFG 262


>gi|262170539|ref|ZP_06038217.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           mimicus MB-451]
 gi|261891615|gb|EEY37601.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           mimicus MB-451]
          Length = 263

 Score =  237 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 73/268 (27%), Positives = 129/268 (48%), Gaps = 8/268 (2%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
            N        IG++ +         + +L       G         + F L L+RQ+Y +
Sbjct: 2   LNDVMRWVSSIGQRTLAVSETIGRASLML------FGALVGRPQPIRNFPL-LVRQLYSI 54

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           GV  + ++++     G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR
Sbjct: 55  GVQSLAIIMVSGLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGR 114

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           +GSA+ AEIG MK  E++ ++  M +D ++ +I+PR WA +IS+PLL ++     I G  
Sbjct: 115 AGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQ 174

Query: 284 IVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
           +V   +  I    F+S   ++  L  +I    IK    A  +  +A+  G+     S  +
Sbjct: 175 LVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGI 234

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            +  T  VV S   V+ +D +     F 
Sbjct: 235 SRATTRTVVHSSLAVLGLDFVLTALMFG 262


>gi|289547869|ref|YP_003472857.1| hypothetical protein Thal_0093 [Thermocrinis albus DSM 14484]
 gi|289181486|gb|ADC88730.1| protein of unknown function DUF140 [Thermocrinis albus DSM 14484]
          Length = 245

 Score =  237 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 75/245 (30%), Positives = 123/245 (50%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G     T       ++    L   ++Q+ Y+G   VPVV++ S  +G VIA 
Sbjct: 1   MLRVFEEVGKAALLTFLGIYFLFRNPPRLYHFVKQLAYLGAETVPVVVITSLFSGGVIAL 60

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      +F AE     ++++   RE+G +LTA+M+  R GSA+ A IG+M+I E+IDA+
Sbjct: 61  QTYSTFHRFNAEFLIGAVVALSMFRELGPVLTALMVTARVGSAMTASIGTMRITEQIDAL 120

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG++ V  L++PRI A ++ LPLLTI+++ + I+G   V    + +   +F+ R    
Sbjct: 121 EVMGMNPVSYLVTPRIVAGVLGLPLLTIISDVAGILGGWFVAVGLFGVNNHLFWERMRDL 180

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               +   GL KA F    +  V+   GF     +  +G+  T+ VV S  +V+I D   
Sbjct: 181 VEFYDFVGGLYKAVFFGLVVSAVSCYFGFYTKGGTEGVGRATTSSVVTSSMLVLISDYFL 240

Query: 365 AIFYF 369
               F
Sbjct: 241 TAIIF 245


>gi|262401810|ref|ZP_06078375.1| uncharacterized ABC transporter permease component YrbE [Vibrio sp.
           RC586]
 gi|262351782|gb|EEZ00913.1| uncharacterized ABC transporter permease component YrbE [Vibrio sp.
           RC586]
          Length = 263

 Score =  237 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 72/268 (26%), Positives = 129/268 (48%), Gaps = 8/268 (2%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
            N        +G++ +         + +L       G         + F L L+RQ+Y +
Sbjct: 2   LNDVMRWVSSVGQRTLAVSETFGRASLML------FGALVGRPQPIRNFPL-LVRQLYSI 54

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           GV  + ++++     G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR
Sbjct: 55  GVQSLAIIMVSGLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGR 114

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           +GSA+ AEIG MK  E++ ++  M +D ++ +I+PR WA +IS+PLL ++     I G  
Sbjct: 115 AGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQ 174

Query: 284 IVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
           +V   +  I    F+S   ++  L  +I    IK    A  +  +A+  G+     S  +
Sbjct: 175 LVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGI 234

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            +  T  VV S   V+ +D +     F 
Sbjct: 235 SRATTRTVVHSSLAVLGLDFVLTALMFG 262


>gi|229527546|ref|ZP_04416938.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae 12129(1)]
 gi|229335178|gb|EEO00663.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae 12129(1)]
          Length = 263

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 74/268 (27%), Positives = 130/268 (48%), Gaps = 8/268 (2%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
            N        +G++ +         + +L       G         + F L L+RQ+Y +
Sbjct: 2   LNDVMRWVSSVGQRTLAVSETFGRASLML------FGALVGRPQPIRHFPL-LVRQLYSI 54

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           GV  + ++I+     G V++ QG   L  +GAEI    ++++  LRE+G ++TA++ AGR
Sbjct: 55  GVQSLAIIIVSGLFIGMVLSLQGYVILVDYGAEISLGQMVALSLLRELGPVVTALLFAGR 114

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           +GSA+ AEIG MK  E++ ++  M +D ++ +I+PR WA +IS+PLL ++     I G  
Sbjct: 115 AGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQ 174

Query: 284 IVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
           +V   +  I    F+S   ++  L  +I    IK    A  +  +A+  G+     S  +
Sbjct: 175 LVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGI 234

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            +  T  VV S   V+ +D +     F 
Sbjct: 235 SRATTRTVVHSSLAVLGLDFVLTALMFG 262


>gi|229521585|ref|ZP_04411003.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae TM 11079-80]
 gi|229341179|gb|EEO06183.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae TM 11079-80]
          Length = 263

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 72/268 (26%), Positives = 129/268 (48%), Gaps = 8/268 (2%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
            N        +G++ +         + +L       G         + F L L+RQ+Y +
Sbjct: 2   LNDVMRWVSSVGQRTLAVSETFGRASLML------FGALVGRPQPIRHFPL-LVRQLYSI 54

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           GV  + ++I+     G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR
Sbjct: 55  GVQSLAIIIVSGLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGR 114

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           +GSA+ AEIG MK  E++ ++  M +D ++ +I+PR WA +IS+PLL ++     + G  
Sbjct: 115 AGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGVWGGQ 174

Query: 284 IVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
           +V   +  I    F+S   ++  L  +I    IK    A  +  +A+  G+     S  +
Sbjct: 175 LVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGI 234

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            +  T  VV S   V+ +D +     F 
Sbjct: 235 SRATTRTVVHSSLAVLGLDFVLTALMFG 262


>gi|74316265|ref|YP_314005.1| ABC transporter permease [Thiobacillus denitrificans ATCC 25259]
 gi|74055760|gb|AAZ96200.1| ABC transport system permease protein [Thiobacillus denitrificans
           ATCC 25259]
          Length = 364

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 94/345 (27%), Positives = 170/345 (49%), Gaps = 11/345 (3%)

Query: 31  INKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK--LQGVSTHIEQLFSLISFT 88
           +         ++D + +T +DT GA L++   +         L+        +  L++  
Sbjct: 29  LPDLSGKRVRVIDGAGVTHLDTNGAWLLLAAAQPKADAPAPDLRDFQPRHLSMLRLVAQH 88

Query: 89  HRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYK 148
                    P++       + +    G+  +   +        +G +             
Sbjct: 89  RAATPPLPAPRQ-------EGVLALTGRGALTVWSHLVGLLDFVGRLALELAGLVGQPGL 141

Query: 149 FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL 208
           ++     L  Q+  V V  +P+V  + F+ G V A     Q  QFGA IF +D + +  L
Sbjct: 142 WR--WRELAAQVRDVFVGAIPIVSGMMFLLGVVFAYLLGDQARQFGANIFVVDGLLLAVL 199

Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268
           REI  ++ AV++AGR+G+AI A++G+MK+ EEIDAI T+GL  + +L+ PR+ ALI+++P
Sbjct: 200 REISPVIVAVLVAGRTGAAITAQLGTMKVAEEIDAIATLGLSPLAVLVIPRVLALIVAMP 259

Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328
           LL  + + + ++G  +V+ +   I   +F  R +    L  +  GL KAP  A  I +++
Sbjct: 260 LLVFIGDIAGLVGGMLVVQQQLAISPPIFLDRLYDVILLKTLMVGLGKAPVFALFIALIS 319

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
            + G AV   + S+G   T+ VVQS+  VII++++FA+ +  +GI
Sbjct: 320 CRMGLAVSRDARSVGVNTTSTVVQSLVAVIILNAVFAVAFVRLGI 364


>gi|71282011|ref|YP_271183.1| hypothetical protein CPS_4535 [Colwellia psychrerythraea 34H]
 gi|71147751|gb|AAZ28224.1| putative membrane protein [Colwellia psychrerythraea 34H]
          Length = 258

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 72/255 (28%), Positives = 129/255 (50%), Gaps = 1/255 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           ++I      + +    LG  +             +     L++Q+Y VGV  + ++++  
Sbjct: 2   QQIQFLGKQTLNMISGLGRAVILLISALMHVPNIRKGTPLLMQQLYSVGVLSLLIIVVSG 61

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L  +GAE     ++++  LRE+G ++ A++ AGR+GSA+ AEIG M
Sbjct: 62  TFIGMVLALQGYTILVGYGAEASLGPMVALSLLRELGPVVAALLFAGRAGSALTAEIGLM 121

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +I+PR WA  ISLPLL  + +   I+GA +V   +  +   
Sbjct: 122 KATEQLSSLEMMAIDPLRRVIAPRFWAGFISLPLLAAIFSMVGILGAHVVGVDWLGVDGG 181

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S          +I  G+IK+   A  +  +A+ +G+     S  + +  T+ VVQS 
Sbjct: 182 TFWSVMQDQVDFQKDILNGIIKSIVFAFVVMWIAVYKGYDCEPTSEGISRATTSTVVQSS 241

Query: 355 SIVIIIDSLFAIFYF 369
            +V+ +D +     F
Sbjct: 242 LLVLFLDFILTALMF 256


>gi|229513445|ref|ZP_04402909.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae TMA 21]
 gi|229524502|ref|ZP_04413907.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae bv. albensis VL426]
 gi|261211081|ref|ZP_05925370.1| uncharacterized ABC transporter permease component YrbE [Vibrio sp.
           RC341]
 gi|229338083|gb|EEO03100.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae bv. albensis VL426]
 gi|229349322|gb|EEO14278.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae TMA 21]
 gi|260839582|gb|EEX66193.1| uncharacterized ABC transporter permease component YrbE [Vibrio sp.
           RC341]
          Length = 263

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 73/268 (27%), Positives = 129/268 (48%), Gaps = 8/268 (2%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
            N        +G++ +         + +L       G         + F L L+RQ+Y +
Sbjct: 2   LNDVMRWVSSVGQRTLAVSETFGRASLML------FGALVGRPQPVRHFPL-LVRQLYSI 54

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           GV  + ++I+     G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR
Sbjct: 55  GVQSLAIIIVSGLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGR 114

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           +GSA+ AEIG MK  E++ ++  M +D ++ +I+PR WA +IS+PLL ++     I G  
Sbjct: 115 AGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQ 174

Query: 284 IVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
           +V   +  I    F+S   ++  L  +I    IK    A  +  +A+  G+     S  +
Sbjct: 175 LVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGI 234

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            +  T  VV S   V+ +D +     F 
Sbjct: 235 SRATTRTVVHSSLAVLGLDFVLTALMFG 262


>gi|22124065|ref|NP_667488.1| hypothetical protein y0145 [Yersinia pestis KIM 10]
 gi|45443560|ref|NP_995099.1| hypothetical protein YP_3829 [Yersinia pestis biovar Microtus str.
           91001]
 gi|51597810|ref|YP_072001.1| ABC transporter, permease subunit, toluene tolerance protein
           [Yersinia pseudotuberculosis IP 32953]
 gi|108809720|ref|YP_653636.1| hypothetical protein YPA_3729 [Yersinia pestis Antiqua]
 gi|108813616|ref|YP_649383.1| hypothetical protein YPN_3456 [Yersinia pestis Nepal516]
 gi|145597639|ref|YP_001161715.1| hypothetical protein YPDSF_0323 [Yersinia pestis Pestoides F]
 gi|153950379|ref|YP_001399442.1| ABC transporter permease [Yersinia pseudotuberculosis IP 31758]
 gi|153997349|ref|ZP_02022449.1| putative membrane protein [Yersinia pestis CA88-4125]
 gi|162419182|ref|YP_001605691.1| hypothetical protein YpAngola_A1145 [Yersinia pestis Angola]
 gi|165928109|ref|ZP_02223941.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165937439|ref|ZP_02226002.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166011407|ref|ZP_02232305.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166212216|ref|ZP_02238251.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167400680|ref|ZP_02306189.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167420726|ref|ZP_02312479.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167426982|ref|ZP_02318735.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167470182|ref|ZP_02334886.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           FV-1]
 gi|170022764|ref|YP_001719269.1| hypothetical protein YPK_0513 [Yersinia pseudotuberculosis YPIII]
 gi|186897002|ref|YP_001874114.1| hypothetical protein YPTS_3704 [Yersinia pseudotuberculosis PB1/+]
 gi|218930586|ref|YP_002348461.1| hypothetical protein YPO3574 [Yersinia pestis CO92]
 gi|229836870|ref|ZP_04457035.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis Pestoides A]
 gi|229839230|ref|ZP_04459389.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229899795|ref|ZP_04514936.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229904110|ref|ZP_04519221.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis Nepal516]
 gi|270488545|ref|ZP_06205619.1| conserved hypothetical protein [Yersinia pestis KIM D27]
 gi|294505304|ref|YP_003569366.1| hypothetical protein YPZ3_3195 [Yersinia pestis Z176003]
 gi|21956812|gb|AAM83739.1|AE013614_13 hypothetical protein y0145 [Yersinia pestis KIM 10]
 gi|45438429|gb|AAS63976.1| putative membrane protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|51591092|emb|CAH22756.1| ABC transporter, permease subunit, toluene tolerance protein
           [Yersinia pseudotuberculosis IP 32953]
 gi|108777264|gb|ABG19783.1| membrane protein [Yersinia pestis Nepal516]
 gi|108781633|gb|ABG15691.1| putative membrane protein [Yersinia pestis Antiqua]
 gi|115349197|emb|CAL22162.1| putative membrane protein [Yersinia pestis CO92]
 gi|145209335|gb|ABP38742.1| membrane protein [Yersinia pestis Pestoides F]
 gi|149288986|gb|EDM39066.1| putative membrane protein [Yersinia pestis CA88-4125]
 gi|152961874|gb|ABS49335.1| putative ABC transporter, permease protein YrbE [Yersinia
           pseudotuberculosis IP 31758]
 gi|162351997|gb|ABX85945.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           Angola]
 gi|165914544|gb|EDR33158.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165919883|gb|EDR37184.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165989791|gb|EDR42092.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166206962|gb|EDR51442.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166961532|gb|EDR57553.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167050048|gb|EDR61456.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167054022|gb|EDR63850.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|169749298|gb|ACA66816.1| protein of unknown function DUF140 [Yersinia pseudotuberculosis
           YPIII]
 gi|186700028|gb|ACC90657.1| protein of unknown function DUF140 [Yersinia pseudotuberculosis
           PB1/+]
 gi|229678228|gb|EEO74333.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis Nepal516]
 gi|229687287|gb|EEO79362.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229695596|gb|EEO85643.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229705813|gb|EEO91822.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis Pestoides A]
 gi|262363367|gb|ACY60088.1| hypothetical protein YPD4_3184 [Yersinia pestis D106004]
 gi|262367255|gb|ACY63812.1| hypothetical protein YPD8_3142 [Yersinia pestis D182038]
 gi|270337049|gb|EFA47826.1| conserved hypothetical protein [Yersinia pestis KIM D27]
 gi|294355763|gb|ADE66104.1| hypothetical protein YPZ3_3195 [Yersinia pestis Z176003]
 gi|320017116|gb|ADW00688.1| putative toluene transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 260

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 71/256 (27%), Positives = 122/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K +        +     G              + +     LI+Q+Y VGV  + ++++  
Sbjct: 4   KSLASLGRRGINVCASFGRAGLMLFNALVGRPEPRKQWPLLIKQLYSVGVQSLLIIVVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++S+  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +++PR WA +IS+PLLT +     I G S+V   +  I   
Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDSG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +      ++   LIK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQNAVEWRTDLLNCLIKSLVFALTVTWIALFNGYDAVPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|117618508|ref|YP_858369.1| putative ABC transporter, permease protein [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
 gi|117559915|gb|ABK36863.1| putative ABC transporter, permease protein [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
          Length = 259

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 72/255 (28%), Positives = 124/255 (48%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           ++ K           +G          A     +     L++Q+Y VGV  V ++++   
Sbjct: 5   QVSKLGRSGVRFISAIGRATIMLFHALAGKPAPRKHFPLLVQQLYVVGVQSVAIILVSGL 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V++ QG   L  FGAE     L+S+  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 65  FIGMVLSLQGYNVLKDFGAEQSLGPLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMK 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +++PR WA +IS+PLL  + +   I G  +V   +  +    
Sbjct: 125 ATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLAFMFSLIGIFGGKLVGVDWLGVDEGS 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++     +I  G IK+   A  +  +A+  G+     S  + +  T  VV S  
Sbjct: 185 FWSAMQASVDWQDDIMQGAIKSLIFALVVTWIALFNGYDAKPTSAGISQATTRTVVHSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFILTAVMFG 259


>gi|304396326|ref|ZP_07378207.1| protein of unknown function DUF140 [Pantoea sp. aB]
 gi|304355835|gb|EFM20201.1| protein of unknown function DUF140 [Pantoea sp. aB]
          Length = 260

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 71/256 (27%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K +  F           G               F+     LI+Q+Y VGV  + ++++  
Sbjct: 4   KALASFGRQGIETCASFGRAGLMLFHALVGKPAFRRHTPLLIKQLYSVGVLSLLIIVVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ +GAE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLVLNTYGAETSLGMLVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R ++SPR WA  IS+PLLT++     I G ++V   +  I   
Sbjct: 124 KATEQLSSMEMMAVDPLRRVVSPRFWAGFISMPLLTMIFTAVGIAGGALVGVSWKGIDPG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +      ++   +IK+   A  +  +A+  G+     S  + +  T  VV + 
Sbjct: 184 FFWSAMQNAVDFRTDVVNCIIKSAVFAVTVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|146305912|ref|YP_001186377.1| hypothetical protein Pmen_0877 [Pseudomonas mendocina ymp]
 gi|145574113|gb|ABP83645.1| protein of unknown function DUF140 [Pseudomonas mendocina ymp]
          Length = 265

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 133/256 (51%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +++  F          LG  +           +    L  LI+Q++ VGV  + ++++  
Sbjct: 8   ERLRLFGRAGIDVVATLGRSVLFLVGAVFGRSRAGKPLQLLIKQLFAVGVMSLAIIVVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L  +G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+M
Sbjct: 68  IFIGMVLALQGYNILVSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +I+PR+WA  IS+PLL ++ +   I G ++V   +  +   
Sbjct: 128 KSTEQLSSLEMIGVDPLKYIIAPRLWAGFISMPLLAMIFSVVGIWGGAMVAVDWLGVYEG 187

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   ++ +   ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SFWSNMQNSVSFYDDVLNGVIKSIVFAFVVTWIAVFQGYDCEPTSEGISRATTRTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|302341646|ref|YP_003806175.1| hypothetical protein Deba_0204 [Desulfarculus baarsii DSM 2075]
 gi|301638259|gb|ADK83581.1| protein of unknown function DUF140 [Desulfarculus baarsii DSM 2075]
          Length = 244

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 71/237 (29%), Positives = 122/237 (51%)

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G ++    +      +    +  +++QM +VG   + VV+L    TG V A Q  +  S 
Sbjct: 8   GEIVLLLAQAALWLLRPPWRMRLVLKQMEFVGNKSINVVMLTGAFTGGVFALQSYYGFSL 67

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
           FGAE      +++   RE+G +LT++M+ GR+GSA+ AEIG+M++ E+IDA+  M ++ V
Sbjct: 68  FGAESLVGSTVALALTRELGPVLTSLMVTGRAGSAMAAEIGTMRVTEQIDALYVMAVNPV 127

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
           + L+ PR+ A +I LP LTI+ANF  I+G   V      I   VF ++        +I  
Sbjct: 128 QYLVLPRVLAAVIMLPALTIVANFIGILGGYAVGVGMLGINEGVFVAKIIEYVEFDDIGM 187

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           GL+K+      + ++   +GF     +  +G+  T  VV +  +++  D       F
Sbjct: 188 GLVKSAIFGLILSLIGCYKGFYTSGGAEGVGRATTEAVVLASVLILAADYALTAIMF 244


>gi|325273317|ref|ZP_08139589.1| hypothetical protein G1E_09861 [Pseudomonas sp. TJI-51]
 gi|324101550|gb|EGB99124.1| hypothetical protein G1E_09861 [Pseudomonas sp. TJI-51]
          Length = 265

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 70/256 (27%), Positives = 132/256 (51%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +++      +     +LG                 G    LIRQ+Y VGV  + +V++  
Sbjct: 8   ERVRLLGRSAIDVVAVLGRSCLFLFHALVGRGGIGGGFQLLIRQLYSVGVLSLAIVVVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+M
Sbjct: 68  VFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +++PR+WA  ISLPLL ++ +   I G S V   +  +   
Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 187

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F++   ++ +   ++  GLIK+   A     +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SFWANMQNSVSFTDDVLNGLIKSLVFAFVATWIAVFQGYDCEPTSEGISRATTKTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|126663828|ref|ZP_01734823.1| ABC transporter, permease [Flavobacteria bacterium BAL38]
 gi|126624092|gb|EAZ94785.1| ABC transporter, permease [Flavobacteria bacterium BAL38]
          Length = 261

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 69/244 (28%), Positives = 123/244 (50%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
             I    +    +G +    G F    +K        +RQ Y++G   + +V +  F+ G
Sbjct: 7   NIIKVIKAFLIEIGEISYFAGRFFKEFWKPPYEFKEFLRQCYFIGNRSLFLVGVTGFIIG 66

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V   Q    L +FGA  +   ++S+  +REIG ++TA++ AGR GS I AE+GSMK+ E
Sbjct: 67  LVFTLQSRPTLQEFGAVSWMASMVSVSIIREIGPIITALICAGRIGSGIGAELGSMKVTE 126

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +IDA+   G +  + L+  RI A  + LPLL I  +  AI G+ +V     ++ F ++F+
Sbjct: 127 QIDAMEVSGTNPFKYLVITRILATSLMLPLLVIFGDVLAIYGSYLVENVKDNVSFQLYFN 186

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           +  +    +++    +K  F   AIG++   +G+     +  +GK     VV +  ++ +
Sbjct: 187 QVFNILEFSDLIPATLKTFFFGFAIGLIGCYKGYYCKKGTAGVGKAANEAVVYTSMLLFV 246

Query: 360 IDSL 363
           ID +
Sbjct: 247 IDFI 250


>gi|330807561|ref|YP_004352023.1| putative ABC transporter, membrane protein [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327375669|gb|AEA67019.1| putative ABC transporter, membrane protein [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 265

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 68/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +++  F         +LG                 G    L++Q++ VGV  + ++++  
Sbjct: 8   ERVRLFGRSGIDVVAVLGRSSLFLMHALLGRNSTGGGFGLLVKQLHSVGVMSLVIIVVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   LS +G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+M
Sbjct: 68  IFIGMVLALQGFNILSSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +I+PR+WA  ISLP+L I+ +   I G S V   +  +   
Sbjct: 128 KSTEQLSSLEMIGVDPLKYIIAPRLWAGFISLPVLAIIFSVVGIWGGSWVAVDWLGVYEG 187

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            ++S   ++     ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SYWSNMQNSVDFLDDVLNGVIKSAVFAFVVTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|144899037|emb|CAM75901.1| ABC transporter permease protein [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 257

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 63/262 (24%), Positives = 124/262 (47%), Gaps = 7/262 (2%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           +    IG+  + F++     +   G  +S+         +   +    +R M  +G   +
Sbjct: 2   DFVAAIGRIFLAFLSHVGRLSAFAGTALSHV-------VRPPFYPRLTLRAMVEIGYYSL 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
           PVV L +  TG V+A Q     S+F AE     ++ +   RE+  +L  +M+AGR G+++
Sbjct: 55  PVVGLTAVFTGMVLALQSYSGFSRFAAESAVATVVVLSVTRELAPVLAGLMVAGRIGASM 114

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG+M++ E+IDA+ T+  +  + L++PR+ A ++ +P L ++A+   + G  IV   
Sbjct: 115 AAEIGTMRVTEQIDALTTLSTNPFKYLVAPRLLAGLLMVPCLVLVADIIGVFGGYIVGVY 174

Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
                 + + +R        ++ +GL KA      I ++    G+     +  +G   T 
Sbjct: 175 KLGFNPSTYLARTWEFLEPLDVISGLTKAAVFGFIISLMGCYHGYYSRGGAQGVGAATTN 234

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +  +++I + +    YF 
Sbjct: 235 SVVSAAIMILIFNYVITALYFG 256


>gi|85713028|ref|ZP_01044065.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Idiomarina baltica OS145]
 gi|85693131|gb|EAQ31092.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Idiomarina baltica OS145]
          Length = 258

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 64/255 (25%), Positives = 125/255 (49%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           ++ +           +G  ++            +      ++QMY VGV  + ++++   
Sbjct: 3   RLARLGATVTDAIAGIGRALAMLLGAIIGKPTPRKSWPLFVQQMYVVGVLSLIIIVVSGL 62

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 63  FIGMVLGLQGYTILVDYGAEQSLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 122

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +++PR WA  +S+PLL ++ +   I G  +V   +  +    
Sbjct: 123 ATEQLSSLEMMAVDPLRRVVAPRFWAGFVSMPLLALIFSAVGIYGGYLVGSGWLGVDEGA 182

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   S      ++  G+IK+   A  +  +A+ +G+     S  + K  T+ VV +  
Sbjct: 183 FWSVMQSAVDWRDDLMNGIIKSLVFAFVVTWIALYKGYRCEPTSAGISKATTSTVVTASL 242

Query: 356 IVIIIDSLFAIFYFA 370
            ++ +D +     F 
Sbjct: 243 AILGLDFILTALMFG 257


>gi|90413007|ref|ZP_01221005.1| hypothetical protein P3TCK_24185 [Photobacterium profundum 3TCK]
 gi|90326022|gb|EAS42461.1| hypothetical protein P3TCK_24185 [Photobacterium profundum 3TCK]
          Length = 260

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 73/254 (28%), Positives = 126/254 (49%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I         +   +G           S  + K     L++Q+Y VGV  + ++++    
Sbjct: 6   IASVGRQGIEKFQTIGRATLLLYGALVSKPQPKKMFPLLMKQLYSVGVLSIAIIMVSGLF 65

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V++ QG   L  FGAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 66  IGMVLSLQGYIVLVDFGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +I+PR WA +IS+PLL ++ +   I G  +V   +  I +  F
Sbjct: 126 TEQLSSMEMMAVDPLRRVIAPRFWAGVISMPLLAMMFSAVGIWGGQLVGVDWKGIDYGSF 185

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   ++  L  +I    IK+   A  I  +A+  G+     S  + +  T  VV S   
Sbjct: 186 WSVMQASVELGEDIGNSFIKSVVFAITITWIAVFNGYDAVPTSEGISRATTRTVVNSSLA 245

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 246 VLGLDFVLTALMFG 259


>gi|312898371|ref|ZP_07757761.1| conserved hypothetical protein [Megasphaera micronuciformis F0359]
 gi|310620290|gb|EFQ03860.1| conserved hypothetical protein [Megasphaera micronuciformis F0359]
          Length = 264

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 73/263 (27%), Positives = 119/263 (45%), Gaps = 9/263 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
            ++L   IG+  +    +    + + G  I             +      I QM ++GV 
Sbjct: 11  LQHLLERIGRFTLHIFEEVGVISVLFGQTIKQM---------PRIRRDLTINQMAHLGVD 61

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
             P+V L     G V+  Q    L ++GA+     +MS+   RE+G +LT V++AGR G+
Sbjct: 62  SFPIVALTMLFAGMVMTLQIVDILMRYGAQSTLGGIMSVAMGRELGPILTGVVVAGRVGA 121

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG+MK+ E+IDA+R M  D V  L+ PR  A +  +PLLT         G   V 
Sbjct: 122 AMTAEIGTMKVTEQIDALRCMATDPVAYLVVPRFVACVFMVPLLTFFGYLIGTGGGYCVA 181

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
                +    +         ++++  GLIKA      I +VA  EG      +  +G+  
Sbjct: 182 VFSAGLTDYTYMHSIEFFTEISDVLFGLIKAGVFGGIIALVACFEGMHAKSGAEGVGQAT 241

Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369
           T  VV SI  + I + + ++  +
Sbjct: 242 TKSVVTSIIFIFITNYILSVILY 264


>gi|330501880|ref|YP_004378749.1| hypothetical protein MDS_0966 [Pseudomonas mendocina NK-01]
 gi|328916166|gb|AEB56997.1| hypothetical protein MDS_0966 [Pseudomonas mendocina NK-01]
          Length = 265

 Score =  236 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 65/256 (25%), Positives = 133/256 (51%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +++  F          LG  +           +    L  LI+Q++ VGV  + ++++  
Sbjct: 8   ERLRLFGRAGIDVVATLGRSVLFLLGALFGRSRAGKPLQLLIKQLFAVGVMSLAIIVVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L  +G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+M
Sbjct: 68  IFIGMVLALQGYNILVSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +++PR+WA  IS+PLL ++ +   I G ++V   +  +   
Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPLLAMIFSVVGIWGGAMVAVDWLGVYEG 187

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F++   ++ +   ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SFWANMQNSVSFYDDVLNGVIKSIVFAFVVTWIAVFQGYDCEPTSEGISRATTRTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|78357340|ref|YP_388789.1| hypothetical protein Dde_2297 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78219745|gb|ABB39094.1| Protein of unknown function DUF140 [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
          Length = 270

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 74/270 (27%), Positives = 136/270 (50%), Gaps = 12/270 (4%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
           +        +G+  ++FI +       LG V+    +     +        +++Q+Y++G
Sbjct: 8   SGLTAPLQQLGRNTLRFIGE-------LGAVLLFFLDAVRHIFIASRLFRKVVQQVYFIG 60

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
              + V+ LI   TG V+  QG + L +FG+E      +++  +RE+G +LTA+M+ GR+
Sbjct: 61  SKSLFVIALIGIFTGMVLGLQGYYTLVKFGSEGLLGAAVALTLIRELGPVLTAIMVTGRA 120

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           GSA+ AEIG M+I+++IDA+  M +  +  L++PR+ A +I  P+LT L N   IIG  +
Sbjct: 121 GSAMAAEIGVMRISDQIDALEVMDVPPMGYLVTPRLLASLIVFPMLTALFNTIGIIGGYL 180

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHS 339
                  I   V+F R  S+   +++  G +K    A  + I++  +G+       G+  
Sbjct: 181 TGVVLLGINSGVYFYRIDSSVGWSDVSGGFLKTMVFAVIVSIISCYQGYFTHMRKDGMGP 240

Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
             +    T+ VV S  +V++ D +   F  
Sbjct: 241 EGVSNSTTSAVVMSCVLVLVSDYVLTSFLL 270


>gi|330827998|ref|YP_004390950.1| ABC transporter permease [Aeromonas veronii B565]
 gi|328803134|gb|AEB48333.1| ABC-type transporter, permease subunit [Aeromonas veronii B565]
          Length = 259

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 74/255 (29%), Positives = 125/255 (49%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           +I K           +G          A   + +     LI+Q+Y VGV  V ++++   
Sbjct: 5   QISKLGRVGVRFISSVGRATIMLFHALAGKPEPRKHFPLLIQQLYVVGVQSVAIILVSGL 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V++ QG   L  FGAE     L+S+  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 65  FIGMVLSLQGYNVLKDFGAEQSLGPLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMK 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +++PR WA +IS+PLL  + +   I G  +V   +  +    
Sbjct: 125 ATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLAFMFSLIGIFGGKLVGVDWLGVDEGG 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++     +I  G IK+   A  +  +A+  G+     S  + +  T  VV S  
Sbjct: 185 FWSAMQASVDWHEDIMQGAIKSLIFALVVTWIALFNGYDAKPTSAGISQATTRTVVHSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFILTAVMFG 259


>gi|312881882|ref|ZP_07741649.1| hypothetical protein VIBC2010_12694 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309370461|gb|EFP97946.1| hypothetical protein VIBC2010_12694 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 263

 Score =  236 bits (602), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 78/268 (29%), Positives = 131/268 (48%), Gaps = 8/268 (2%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
                NL    G++ ++        + +L       G         K   L LIRQ+Y V
Sbjct: 2   IKGVINLTASTGQRALQICESFGRASLMLW------GALVNRPQPLKNAPL-LIRQLYSV 54

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           GV  + +++L     G V++ QG   L  FGAE     ++++  LRE+G ++TA++ AGR
Sbjct: 55  GVQSLLIIVLSGLFIGMVLSLQGYVILVDFGAEGALGQMVALSLLRELGPVVTALLFAGR 114

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           +GSA+ AEIG MK  E++ ++  M +D ++ +I+PR WA +IS+P+L ++     I G  
Sbjct: 115 AGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPMLAMIFMAVGIWGGQ 174

Query: 284 IVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
           +V   +  I    F+S   ++  L  +I   LIK+   A  +  VA+  G+     S  +
Sbjct: 175 LVGVDWKGIDNGSFWSAMQASVELGQDIGNSLIKSMVFAFTVTWVALFNGYDAVPTSEGI 234

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            +  T  VV S   V+ +D +     F 
Sbjct: 235 SRATTRTVVHSSLAVLGLDFVLTALMFG 262


>gi|308189078|ref|YP_003933209.1| ABC transport system, permease protein yrbE [Pantoea vagans C9-1]
 gi|308059588|gb|ADO11760.1| Putative ABC transport system, permease protein yrbE [Pantoea
           vagans C9-1]
          Length = 260

 Score =  236 bits (602), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 71/256 (27%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K +  F           G               F+     LI+Q+Y VGV  + ++++  
Sbjct: 4   KALASFGRQGIETCASFGRAGLMLFHALVGKPAFRRHSPLLIKQLYSVGVLSLLIIVVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ +GAE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLVLTTYGAETSLGMLVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R ++SPR WA  IS+PLLT++     I G ++V   +  I   
Sbjct: 124 KATEQLSSMEMMAVDPLRRVVSPRFWAGFISMPLLTMIFTAVGIAGGALVGVSWKGIDPG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +      ++   +IK+   A  +  +A+  G+     S  + +  T  VV + 
Sbjct: 184 FFWSAMQNAVDFRTDVVNCIIKSAVFAVTVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|312959004|ref|ZP_07773523.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas
           fluorescens WH6]
 gi|311286774|gb|EFQ65336.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas
           fluorescens WH6]
          Length = 265

 Score =  236 bits (602), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +K+  F         +LG                 G    LI+Q++ VGV  + ++++  
Sbjct: 8   EKVRLFGRSGIDMVEVLGRSTIFLFHALLGRGGIGGGFGLLIKQLHSVGVMSLVIIVVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   LS +G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+M
Sbjct: 68  IFIGMVLALQGFNILSGYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +++PR+WA  ISLPLL ++ +   I G S V   +  +   
Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLAMIFSVVGIWGGSWVAVDWLGVYDG 187

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            ++    ++ T   ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SYWGNMQNSVTFNGDVLNGIIKSIVFAFVVTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|170723417|ref|YP_001751105.1| hypothetical protein PputW619_4256 [Pseudomonas putida W619]
 gi|169761420|gb|ACA74736.1| protein of unknown function DUF140 [Pseudomonas putida W619]
          Length = 265

 Score =  236 bits (602), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           ++I  F   +     +LG                 G    L +Q+Y VGV  + +V +  
Sbjct: 8   ERIRLFGRSAIDVLAVLGRSCLFLFHALVGRGGIGGGFQLLTKQLYSVGVLSLAIVAVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+M
Sbjct: 68  VFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +++PR+WA  ISLPLL ++ +   I G S V   +  +   
Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 187

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F++   ++ +   ++  GL+K+   A     +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SFWANMQNSVSFTDDVLNGLVKSLVFAFVTTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|15642515|ref|NP_232148.1| hypothetical protein VC2519 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121591413|ref|ZP_01678693.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|147675288|ref|YP_001218017.1| hypothetical protein VC0395_A2101 [Vibrio cholerae O395]
 gi|153215706|ref|ZP_01950087.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|153801107|ref|ZP_01955693.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|153818001|ref|ZP_01970668.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153822409|ref|ZP_01975076.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|153825790|ref|ZP_01978457.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|153829794|ref|ZP_01982461.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|227082638|ref|YP_002811189.1| hypothetical protein VCM66_2441 [Vibrio cholerae M66-2]
 gi|254225914|ref|ZP_04919516.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|254291437|ref|ZP_04962229.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|9657102|gb|AAF95661.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121546729|gb|EAX56904.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|124114624|gb|EAY33444.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|124123340|gb|EAY42083.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|125621540|gb|EAZ49872.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|126511436|gb|EAZ74030.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126520052|gb|EAZ77275.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|146317171|gb|ABQ21710.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|148874712|gb|EDL72847.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|149740513|gb|EDM54628.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|150422627|gb|EDN14582.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|227010526|gb|ACP06738.1| conserved hypothetical protein [Vibrio cholerae M66-2]
 gi|227014409|gb|ACP10619.1| conserved hypothetical protein [Vibrio cholerae O395]
          Length = 258

 Score =  236 bits (602), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 71/257 (27%), Positives = 127/257 (49%), Gaps = 3/257 (1%)

Query: 116 KKIVKFINDSCSQAHILGLV-ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
           + +      + + +   G   +   G         + F L L+RQ+Y +GV  + ++I+ 
Sbjct: 2   RWVSSVGQRTLAVSETFGRASLMLFGALVGRPQPIRHFPL-LVRQLYSIGVQSLAIIIVS 60

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
               G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG 
Sbjct: 61  GLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGL 120

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           MK  E++ ++  M +D ++ +I+PR WA +IS+PLL ++     I G  +V   +  I  
Sbjct: 121 MKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDH 180

Query: 295 AVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
             F+S   ++  L  +I    IK    A  +  +A+  G+     S  + +  T  VV S
Sbjct: 181 GSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHS 240

Query: 354 ISIVIIIDSLFAIFYFA 370
              V+ +D +     F 
Sbjct: 241 SLAVLGLDFVLTALMFG 257


>gi|127514231|ref|YP_001095428.1| hypothetical protein Shew_3303 [Shewanella loihica PV-4]
 gi|126639526|gb|ABO25169.1| protein of unknown function DUF140 [Shewanella loihica PV-4]
          Length = 261

 Score =  236 bits (602), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 75/255 (29%), Positives = 128/255 (50%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           +I +    +      LG          A   + +     LI+Q+Y +GV  + ++++   
Sbjct: 6   QIARLGRGAIDSVTGLGRAGLMLWGAIAKIPRVRKGTPLLIKQLYVIGVQSMVIILVSGL 65

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L  FG E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 66  FIGMVLALQGYNILVGFGTEDSLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 125

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +I+PR WA +ISLPLL ++     I G  +V  ++  I    
Sbjct: 126 STEQLSSLEMMAIDPLRQVIAPRFWAGVISLPLLALMFTAVGIYGGHLVGVEWKGIDSGS 185

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++     +I   LIK+   A  +  +A+  G+ V  +   + +  T  VVQS  
Sbjct: 186 FWSILQASVEWRQDIVNCLIKSLVFAVVVTWIALYRGYHVIPNPEGISRATTQTVVQSSL 245

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D L     F 
Sbjct: 246 AVLALDFLLTAMMFG 260


>gi|260779434|ref|ZP_05888325.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260604524|gb|EEX30824.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 263

 Score =  236 bits (602), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 71/262 (27%), Positives = 126/262 (48%), Gaps = 1/262 (0%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +       +      +       G          AS  +    L  L++Q+Y VGV  + 
Sbjct: 1   MLSDFANFVASTGRRAMGVCESFGRASLMLFGALASRPRPIQNLPLLVKQLYSVGVQSLI 60

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +++L     G V++ QG   L  FGAE     ++++  LRE+G ++TA++ AGR+GSA+ 
Sbjct: 61  IIVLSGLFIGMVLSLQGYVILVDFGAEGALGQMVALSLLRELGPVVTALLFAGRAGSALT 120

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ ++  M +D ++ +I+PR WA +IS+P+L ++     I G  +V   +
Sbjct: 121 AEIGLMKATEQLSSMEMMAVDPLKRVIAPRFWAGVISMPMLAMIFMAVGIWGGQLVGVDW 180

Query: 290 YDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             I    F+S   ++  L  +I   +IK+   A  +  +A+  G+     S  + +  T 
Sbjct: 181 KGIDHGSFWSAMQASVELGQDIGNSMIKSLVFAITVTWIALFNGYDAIPTSEGISRATTR 240

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV S   V+ +D +     F 
Sbjct: 241 TVVHSSLAVLGLDFVLTALMFG 262


>gi|46579657|ref|YP_010465.1| hypothetical protein DVU1246 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46449072|gb|AAS95724.1| membrane protein, putative [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311233455|gb|ADP86309.1| protein of unknown function DUF140 [Desulfovibrio vulgaris RCH1]
          Length = 267

 Score =  236 bits (602), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 72/257 (28%), Positives = 129/257 (50%), Gaps = 5/257 (1%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +             LG +     +     +     L  ++ Q+Y +G   + V++LI   
Sbjct: 11  VTALGRSFLRLLGELGAMFIFMLDGFRHIFASTKQLPKIVNQVYVIGYKSLFVILLIGIF 70

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG V+  QG + L +FG+E      +++  +RE+G +LTA+M+ GR+GS++ AEIG M+I
Sbjct: 71  TGMVLGLQGYYTLVKFGSEGLLGAAVALTLIRELGPVLTAIMVTGRAGSSMAAEIGVMRI 130

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            ++IDA+  M ++ +  L+SPRI A +++ PLLT L +   IIG  +       I   V+
Sbjct: 131 TDQIDALDVMDINPMGYLVSPRIAASLVAFPLLTALFDVIGIIGGYVTGVMLLGINEGVY 190

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCVVQ 352
           F R  ++  LA++  G +K+   A  +  V+  +G+       G+    +    T+ VV 
Sbjct: 191 FHRIATSVELADVTGGFMKSLLFALIVSTVSCYQGYFTHMRRDGMGPEGVSNSTTSAVVM 250

Query: 353 SISIVIIIDSLFAIFYF 369
           S  +V++ D +   F  
Sbjct: 251 SCVLVLVADYVLTSFLL 267


>gi|24375440|ref|NP_719483.1| hypothetical protein SO_3953 [Shewanella oneidensis MR-1]
 gi|24350284|gb|AAN56927.1|AE015826_12 conserved hypothetical protein TIGR00056 [Shewanella oneidensis
           MR-1]
          Length = 261

 Score =  236 bits (602), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 125/255 (49%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I      +       G              + +     L+RQ+Y VGV  + ++++   
Sbjct: 6   NIADLGRSAIELVLGFGRAGLMLWGAIVRWPRVRKGFPLLVRQIYVVGVQSMVIIVVSGL 65

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L  FG E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 66  FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 125

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +I+PR WA +IS+PLL ++     I G  +V  ++  I    
Sbjct: 126 STEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLALMFTAVGIYGGHLVGVEWKGIDSGA 185

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++     +I   LIK+   A  +  +A+  G+ V  +   + +  T+ VVQS  
Sbjct: 186 FWSILQASVEWRQDIVNCLIKSGVFAVVVTWIALYRGYQVIPNPEGISRATTSTVVQSSL 245

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D L     F 
Sbjct: 246 AVLALDFLLTALMFG 260


>gi|323498697|ref|ZP_08103687.1| hypothetical protein VISI1226_21911 [Vibrio sinaloensis DSM 21326]
 gi|323316253|gb|EGA69274.1| hypothetical protein VISI1226_21911 [Vibrio sinaloensis DSM 21326]
          Length = 262

 Score =  235 bits (601), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 73/254 (28%), Positives = 125/254 (49%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +      + +     G          AS  K    L  L++Q+Y VGV  + +++L    
Sbjct: 8   VASTGRRALAVLESFGRASLMLFGALASKPKPIQNLPLLVKQLYSVGVQSLLIIVLSGLF 67

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V++ QG   L  FGAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 68  IGMVLSLQGYVILIDFGAEGALGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 127

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D ++ +I+PR WA +IS+PLL ++     I G   V   +  I    F
Sbjct: 128 TEQLSSMEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQSVGVDWKGIDHGSF 187

Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   ++  L  +I   +IK+   A  +  +A+  G+     S  + +  T  VV S   
Sbjct: 188 WSTMQASVELGQDIGNSMIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLA 247

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 248 VLGLDFVLTALMFG 261


>gi|258622787|ref|ZP_05717805.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258625813|ref|ZP_05720692.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|262166549|ref|ZP_06034286.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           mimicus VM223]
 gi|258582051|gb|EEW06921.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|258584975|gb|EEW09706.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|262026265|gb|EEY44933.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           mimicus VM223]
          Length = 258

 Score =  235 bits (601), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 70/257 (27%), Positives = 127/257 (49%), Gaps = 3/257 (1%)

Query: 116 KKIVKFINDSCSQAHILGLV-ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
           + +      + + +   G   +   G         + F L L+RQ+Y +GV  + ++++ 
Sbjct: 2   RWVSSIGQRTLAVSETFGRASLMLFGALVGRPQPIRNFPL-LVRQLYSIGVQSLAIIMVS 60

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
               G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG 
Sbjct: 61  GLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGL 120

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           MK  E++ ++  M +D ++ +I+PR WA +IS+PLL ++     I G  +V   +  I  
Sbjct: 121 MKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDH 180

Query: 295 AVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
             F+S   ++  L  +I    IK    A  +  +A+  G+     S  + +  T  VV S
Sbjct: 181 GSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHS 240

Query: 354 ISIVIIIDSLFAIFYFA 370
              V+ +D +     F 
Sbjct: 241 SLAVLGLDFVLTALMFG 257


>gi|120600243|ref|YP_964817.1| hypothetical protein Sputw3181_3451 [Shewanella sp. W3-18-1]
 gi|146291827|ref|YP_001182251.1| hypothetical protein Sputcn32_0722 [Shewanella putrefaciens CN-32]
 gi|120560336|gb|ABM26263.1| protein of unknown function DUF140 [Shewanella sp. W3-18-1]
 gi|145563517|gb|ABP74452.1| protein of unknown function DUF140 [Shewanella putrefaciens CN-32]
 gi|319425062|gb|ADV53136.1| ABC phospholipid transporter, inner membrane subunit, MlaE
           [Shewanella putrefaciens 200]
          Length = 261

 Score =  235 bits (601), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 125/255 (49%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I      +       G              + +     L+RQ+Y VGV  + ++++   
Sbjct: 6   SIADLGRSAIELVLGFGRAGLMLWGAIFRWPRVRKGFPLLVRQIYVVGVQSMVIIVVSGL 65

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L  FG E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 66  FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 125

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +I+PR WA +IS+PLL ++     I G  +V  ++  I    
Sbjct: 126 STEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLALMFTAVGIYGGHLVGVEWKGIDSGA 185

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++     +I   LIK+   A  +  +A+  G+ V  +   + +  T+ VVQS  
Sbjct: 186 FWSILQASVEWQKDILNCLIKSGVFAVVVTWIALYRGYQVIPNPEGISRATTSTVVQSSL 245

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D L     F 
Sbjct: 246 AVLALDFLLTALMFG 260


>gi|238899004|ref|YP_002924686.1| putative ABC transporter, permease protein [Candidatus Hamiltonella
           defensa 5AT (Acyrthosiphon pisum)]
 gi|229466764|gb|ACQ68538.1| putative ABC transporter, permease protein [Candidatus Hamiltonella
           defensa 5AT (Acyrthosiphon pisum)]
          Length = 261

 Score =  235 bits (601), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 72/255 (28%), Positives = 123/255 (48%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +             LG              + +  L  LI+Q+Y VGV  + ++++  
Sbjct: 5   ESVSSLGRKGIDACSTLGRAGCMLLNIVFGKPEPRKNLPILIKQLYRVGVQSILIIVISG 64

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ +GAE     L+++   RE+G +++A++ AGR+GSA+ AEIG M
Sbjct: 65  LFIGMVLGLQGYLTLTTYGAEGSLGMLVALSLFRELGPVVSALLFAGRAGSALTAEIGLM 124

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +I+PR WA +ISLPLL  L     I G+S+V   +  I   
Sbjct: 125 KATEQLSSLEMMAIDPLRRVIAPRFWAGVISLPLLAALFISVGIFGSSMVAIDWKGIDAG 184

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            F+S  H +   +++     K+   A  I  +++  G+     S  +    T  VV S  
Sbjct: 185 FFWSAMHDSVMPSDVINCFFKSVSFAVIITWISVFNGYDATPTSEGISLATTRTVVNSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D L  +  F 
Sbjct: 245 AVLAVDFLLTVLMFG 259


>gi|167625602|ref|YP_001675896.1| hypothetical protein Shal_3697 [Shewanella halifaxensis HAW-EB4]
 gi|167355624|gb|ABZ78237.1| protein of unknown function DUF140 [Shewanella halifaxensis
           HAW-EB4]
          Length = 261

 Score =  235 bits (601), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 78/266 (29%), Positives = 135/266 (50%), Gaps = 8/266 (3%)

Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
           S  +    +G+  ++F+        +L   I       A   +F+     L+RQ+Y VGV
Sbjct: 2   SLIDQIARLGRASIEFVIGLGKAGLMLWGAI-------AHRPRFRKGAPLLLRQLYVVGV 54

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             + ++++     G V+A QG   L  FG E     ++++  LRE+G ++TA++ AGR+G
Sbjct: 55  QSMVIILVSGLFIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAG 114

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           SA+ AE+G MK  E++ ++  M +D +R +I+PR WA +ISLPLL ++     I G  IV
Sbjct: 115 SALTAELGLMKSTEQLASLEMMAIDPLRQIIAPRFWAGVISLPLLALMFTAVGIYGGHIV 174

Query: 286 IWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
             ++  I    F+S   ++     +I   +IK+   A  +  +A+  G+ V  +   + +
Sbjct: 175 GVEWKGIDSGSFWSILQASVEWREDIVNCMIKSLLFAVVVTWIALYRGYHVIPNPEGISR 234

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370
             T  VVQS   V+ +D L     F 
Sbjct: 235 ATTQTVVQSSLAVLALDFLLTAIMFG 260


>gi|270263239|ref|ZP_06191509.1| hypothetical protein SOD_d02560 [Serratia odorifera 4Rx13]
 gi|270042927|gb|EFA16021.1| hypothetical protein SOD_d02560 [Serratia odorifera 4Rx13]
          Length = 260

 Score =  235 bits (601), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        + +   G              + +     L++QM+ VGV  + ++++  
Sbjct: 4   QALASLGRRGINTSASFGRAGLMLFNALVGRPEPRKQWPLLLKQMHSVGVQSLLIIMVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +++PR WA +IS+PLLTI+     I G SIV   +  I   
Sbjct: 124 KATEQISSLEMMAVDPLRRIVAPRFWAGLISMPLLTIIFVAVGIWGGSIVGVDWKGIDSG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S          ++   L+K+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQGAVEWRKDLLNCLLKSVVFAITVTWIAIFNGYDAVPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|238785100|ref|ZP_04629095.1| hypothetical protein yberc0001_210 [Yersinia bercovieri ATCC 43970]
 gi|238796191|ref|ZP_04639701.1| hypothetical protein ymoll0001_34470 [Yersinia mollaretii ATCC
           43969]
 gi|238713992|gb|EEQ06009.1| hypothetical protein yberc0001_210 [Yersinia bercovieri ATCC 43970]
 gi|238719884|gb|EEQ11690.1| hypothetical protein ymoll0001_34470 [Yersinia mollaretii ATCC
           43969]
          Length = 260

 Score =  235 bits (601), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 122/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        +     G              + +     L++Q+Y VGV  + ++++  
Sbjct: 4   QALASLGRRGINVCASFGRAGLMLFNALVGRPEPRKQWPLLVKQLYSVGVQSLLIIVVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++S+  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +++PR WA +IS+PLLT +     I G S+V   +  I   
Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDGG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +      ++   LIK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQNAVEWRTDLLNCLIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|260770986|ref|ZP_05879915.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           furnissii CIP 102972]
 gi|260614223|gb|EEX39413.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           furnissii CIP 102972]
 gi|315179032|gb|ADT85946.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Vibrio furnissii NCTC
           11218]
          Length = 263

 Score =  235 bits (600), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 72/262 (27%), Positives = 128/262 (48%), Gaps = 1/262 (0%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +  ++ + I        S     G          A   +    L  LI+Q+Y VGV  + 
Sbjct: 1   MLDNLQRWISGVGRRVLSICESFGRASLMLFGALAGRPRPIQNLPLLIKQLYSVGVQSLA 60

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++++     G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ 
Sbjct: 61  IIVVSGLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALT 120

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ ++  M +D ++ +I+PR+WA +IS+PLL ++     I G  +V   +
Sbjct: 121 AEIGLMKATEQLSSLEMMAVDPLKRVIAPRLWAGLISMPLLAMIFMAVGIWGGQLVGVDW 180

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             I    F+S   ++  L  +I   +IK    A  +  +A+  G+     S  + +  T 
Sbjct: 181 KGIDHGSFWSAMQASVELGEDIGNSVIKCVAFAITVTWIALFNGYDAIPTSEGISRATTR 240

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV S   V+ +D +     F 
Sbjct: 241 TVVHSSLAVLGLDFVLTALMFG 262


>gi|227326638|ref|ZP_03830662.1| hypothetical protein PcarcW_04664 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 260

 Score =  235 bits (600), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 66/256 (25%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        S +   G              +F+     L++Q+Y VGV  + ++++  
Sbjct: 4   RTLASLGRQGISTSASFGRAGLMLFNALVGKPEFRKQWPLLVKQLYSVGVQSLLIIMVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLILTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +++PR WA +IS+PLL ++     I G ++V   +  I   
Sbjct: 124 KATEQLSSMEMMAVDPLRRVVAPRFWAGLISMPLLAVIFVAVGIWGGALVGVDWKGIDSG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S          ++   +IK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQGAVDWRQDVLNCVIKSIVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|197335795|ref|YP_002155152.1| toluene tolerance protein Ttg2B, putative [Vibrio fischeri MJ11]
 gi|197317285|gb|ACH66732.1| toluene tolerance protein Ttg2B, putative [Vibrio fischeri MJ11]
          Length = 264

 Score =  235 bits (600), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 83/266 (31%), Positives = 133/266 (50%), Gaps = 8/266 (3%)

Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
           S  +    IG++ +           +L       G   A     K F L L++Q+Y VGV
Sbjct: 5   SLVSSIEQIGRRALSVCEAFGRATFML------LGAIFAKPQPIKMFPL-LLKQLYSVGV 57

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             + ++++     G VI+ QG   L  +GAE     L+S+  LRE+G ++TA++ AGR+G
Sbjct: 58  LSLVIIVVSGLFIGMVISLQGYIILVDYGAETSLGQLVSLSLLRELGPVVTALLFAGRAG 117

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           SA+ AEIG MK  E+I ++  M +D +R +I+PR+WA IIS+P+L ++     I G  IV
Sbjct: 118 SALTAEIGLMKTTEQISSMEMMAVDPLRQIIAPRLWAGIISMPILAVIFMAVGIWGGQIV 177

Query: 286 IWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
             ++  I +  F+S   S+  +  +I   LIK    A  +  +A+  G+     S  +  
Sbjct: 178 GVEWKGIDYGSFWSVMQSSVDVRYDIVNSLIKCVVFAFIVTWIALFNGYDATPTSEGISL 237

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370
             T  VV S   V+ ID +     F 
Sbjct: 238 ATTRTVVHSSLAVLGIDFVLTALMFG 263


>gi|227112741|ref|ZP_03826397.1| hypothetical protein PcarbP_07254 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 260

 Score =  235 bits (600), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 66/256 (25%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        S +   G              +F+     L++Q+Y VGV  + ++++  
Sbjct: 4   RTLASLGRQGISTSASFGRAGLMLFNALVGKPEFRKQWPLLVKQLYSVGVQSLLIIMVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYIILTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +++PR WA +IS+PLL ++     I G ++V   +  I   
Sbjct: 124 KATEQLSSMEMMAVDPLRRVVAPRFWAGLISMPLLAVIFVAVGIWGGALVGVDWKGIDSG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S          ++   +IK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQGAVDWRQDVLNCVIKSIVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|238793703|ref|ZP_04637325.1| hypothetical protein yinte0001_800 [Yersinia intermedia ATCC 29909]
 gi|238726944|gb|EEQ18476.1| hypothetical protein yinte0001_800 [Yersinia intermedia ATCC 29909]
          Length = 260

 Score =  235 bits (600), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 122/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        +     G              + +     L++Q+Y VGV  + ++++  
Sbjct: 4   QALASLGRRGINVCASFGRAGLMLFNALVGRPEPRKQWPLLVKQLYSVGVQSLLIIVVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++S+  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +++PR WA +IS+PLLT +     I G S+V   +  I   
Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDGG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +      ++   LIK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQNAVEWRTDLLNCLIKSLVFAITVTWIALFNGYDAVPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|109896888|ref|YP_660143.1| hypothetical protein Patl_0560 [Pseudoalteromonas atlantica T6c]
 gi|109699169|gb|ABG39089.1| protein of unknown function DUF140 [Pseudoalteromonas atlantica
           T6c]
          Length = 259

 Score =  235 bits (600), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 70/257 (27%), Positives = 129/257 (50%), Gaps = 1/257 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +     ++       G           +  +F       I+Q+Y VGV  + ++++  
Sbjct: 2   QWLASIGRNTIDTVGSFGRAFLMLMGAIIAKPQFIKNTPLTIKQIYVVGVQSLLIIVVSG 61

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 62  LFIGMVMALQGYTILVDYGAEGSLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 121

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +++PR+WA IIS+P+L ++ +   I+G  +V   +  +   
Sbjct: 122 KATEQLSSLEMMAVDPLRRVVAPRLWAGIISMPMLALIFSAVGILGGHLVGVDWLGVDVG 181

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            ++S   S+     ++  G+IK    A  I  +A+ +G+     S  + K  T  VV S 
Sbjct: 182 SYWSIMQSSVDWNEDVVNGIIKTLVFAFVITWIAIFKGYDAVPTSEGISKATTETVVFSS 241

Query: 355 SIVIIIDSLFAIFYFAI 371
             V+ +D +     F I
Sbjct: 242 LAVLGLDFILTALMFGI 258


>gi|242277698|ref|YP_002989827.1| hypothetical protein Desal_0221 [Desulfovibrio salexigens DSM 2638]
 gi|242120592|gb|ACS78288.1| protein of unknown function DUF140 [Desulfovibrio salexigens DSM
           2638]
          Length = 270

 Score =  235 bits (600), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 72/270 (26%), Positives = 132/270 (48%), Gaps = 12/270 (4%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
           N        +GK  +  +N++ +    L   + +            G     ++++Y++G
Sbjct: 8   NKLLLPINMVGKLSINLLNEAGAMFIFLMHGLLHIFSSL-------GIFKKSVKELYFIG 60

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
           V  + V+ LI   TG V+  Q  + LS+FG+E F    +++  +RE+G +LTA+M+ GR+
Sbjct: 61  VKSITVISLIGLFTGMVVGLQTQYALSKFGSEGFLGAAVALSLVRELGPVLTAIMLTGRA 120

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           GS++ AEIG M+I+E+IDA+  M ++ +  L+SP++ A +IS P+LT   +   I+G  +
Sbjct: 121 GSSMTAEIGVMRISEQIDALELMDINPINYLVSPKLVASLISFPILTAFFDLIGIVGGYL 180

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHS 339
                      V++ R H+     +I  G  K+   A  +  V   +G+       G   
Sbjct: 181 SGVMLMGGNAGVYWHRVHTALGWDDISAGFNKSLVFAVLVCTVCCFQGYFTHHRKDGKGP 240

Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
             + +  TT VV S  +V++ D +      
Sbjct: 241 EGVSQATTTAVVMSCVLVLVADYIITSLLL 270


>gi|229588433|ref|YP_002870552.1| putative ABC transporter membrane protein [Pseudomonas fluorescens
           SBW25]
 gi|229360299|emb|CAY47156.1| putative ABC transport system, membrane protein [Pseudomonas
           fluorescens SBW25]
          Length = 265

 Score =  235 bits (600), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 70/256 (27%), Positives = 133/256 (51%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +K+  F         +LG                 G    L++Q++ VGV  + ++++  
Sbjct: 8   EKVRLFGRSGIDIVEVLGRSTIFLFHALLGRGGIGGGFGLLVKQLHAVGVMSLVIIVVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   LS +G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+M
Sbjct: 68  VFIGMVLALQGFNILSSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +++PR+WA  ISLPLLTI+ +   I G S V   +  +   
Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLTIIFSVVGIWGGSWVAVDWLGVYDG 187

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            +++   ++ T   ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SYWANMQNSVTFTGDVLNGIIKSIVFAFVVTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|319789984|ref|YP_004151617.1| protein of unknown function DUF140 [Thermovibrio ammonificans HB-1]
 gi|317114486|gb|ADU96976.1| protein of unknown function DUF140 [Thermovibrio ammonificans HB-1]
          Length = 260

 Score =  235 bits (600), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 128/262 (48%), Gaps = 7/262 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
              L   +G+ ++ F+          G     + +    ++K    L   I  +  +G  
Sbjct: 1   MVKLLEAVGRWVIAFLE-------FWGRWFLLSAKAVTLAFKPPLRLKRFIYYLATIGSD 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PV+ + S  TG VIA +      +F AE     +++I   RE+  +L+A+++  RSGS
Sbjct: 54  SIPVIAVTSLFTGGVIALETYNAFHRFNAEFMIGAVVAISMARELSPVLSALLVTARSGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG+M++ E+IDA+  M ++ ++ LI+PRI+A  ISL  LT++A+    IG  +V 
Sbjct: 114 AMAAEIGTMRVTEQIDALEMMAVNPIKFLITPRIYATTISLVFLTVIADIIGYIGGYLVS 173

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
              + +   ++     + A + ++F GLIKA      +  ++   G+     +  +G+  
Sbjct: 174 VHIFGVNKTLYLRYTQNFAHMEDVFHGLIKAAVFGFLLSTISCLYGYYTRGGAKGVGEST 233

Query: 347 TTCVVQSISIVIIIDSLFAIFY 368
           T  VV S   ++I D L     
Sbjct: 234 TKAVVSSSIAILIFDYLITYLL 255


>gi|59711002|ref|YP_203778.1| toluene ABC transporter membrane protein [Vibrio fischeri ES114]
 gi|59479103|gb|AAW84890.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Vibrio fischeri ES114]
          Length = 264

 Score =  235 bits (600), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 83/266 (31%), Positives = 133/266 (50%), Gaps = 8/266 (3%)

Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
           S  +    IG++ +           +L       G   A     K F L L++Q+Y VGV
Sbjct: 5   SLVSSIEQIGRRALSVCEAFGRATFML------LGAIFAKPQPIKMFPL-LLKQLYSVGV 57

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             + ++++     G VI+ QG   L  +GAE     L+S+  LRE+G ++TA++ AGR+G
Sbjct: 58  LSLVIIVVSGLFIGMVISLQGYIILVDYGAETSLGQLVSLSLLRELGPVVTALLFAGRAG 117

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           SA+ AEIG MK  E+I ++  M +D +R +I+PR+WA IIS+P+L ++     I G  IV
Sbjct: 118 SALTAEIGLMKTTEQISSMEMMAVDPLRQIIAPRLWAGIISMPVLAVIFMAVGIWGGQIV 177

Query: 286 IWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
             ++  I +  F+S   S+  +  +I   LIK    A  +  +A+  G+     S  +  
Sbjct: 178 GVEWKGIDYGSFWSVMQSSVDVRYDIINSLIKCVVFAFIVTWIALFNGYDATPTSEGISL 237

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370
             T  VV S   V+ ID +     F 
Sbjct: 238 ATTRTVVHSSLAVLGIDFVLTALMFG 263


>gi|212711087|ref|ZP_03319215.1| hypothetical protein PROVALCAL_02156 [Providencia alcalifaciens DSM
           30120]
 gi|212686255|gb|EEB45783.1| hypothetical protein PROVALCAL_02156 [Providencia alcalifaciens DSM
           30120]
          Length = 262

 Score =  235 bits (600), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 73/256 (28%), Positives = 122/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K I  F           G              +F      L++Q+Y VGV  + +V +  
Sbjct: 6   KAIAAFGRRWIETFAAFGRAGYLLFGALFGKPEFGKQWPLLVKQLYSVGVQSLLIVAVSG 65

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ F AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 66  LFIGMVLGLQGYLVLTTFSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 125

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +++PR WA  IS+PLL+++     IIG +IV   +  I   
Sbjct: 126 KATEQISSLEMMAVDPLRRVVAPRFWAGFISMPLLSLIFVAVGIIGGAIVGVDWKGIDPG 185

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   S+     ++    IK+   A  +  +A+  G+     S  + +  T  VV + 
Sbjct: 186 FFWSSMQSSVEWRLDLVNCFIKSVVFAITVTWIALFNGYDAIPTSEGISRATTKTVVHAS 245

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 246 LSVLGLDFVLTALMFG 261


>gi|292486812|ref|YP_003529682.1| hypothetical protein EAMY_0324 [Erwinia amylovora CFBP1430]
 gi|292900790|ref|YP_003540159.1| membrane protein [Erwinia amylovora ATCC 49946]
 gi|291200638|emb|CBJ47770.1| putative membrane protein [Erwinia amylovora ATCC 49946]
 gi|291552229|emb|CBA19266.1| UPF0393 inner membrane protein yrbE [Erwinia amylovora CFBP1430]
 gi|312170880|emb|CBX79139.1| UPF0393 inner membrane protein yrbE [Erwinia amylovora ATCC
           BAA-2158]
          Length = 260

 Score =  235 bits (600), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 71/256 (27%), Positives = 124/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +             LG              +F+     L++Q+Y +GV  + +V++  
Sbjct: 4   QALALLGRQGIRFCASLGRAGLMLFHALFGIPRFRRHAPLLVKQLYSIGVLSLLIVVVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLVLKTYGAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +ISPR WA  IS+PLLT++     I+G ++V   +  I   
Sbjct: 124 KATEQLSSMEMMAVDPLRRIISPRFWAGFISMPLLTLIFVAVGILGGTLVGVSWKGIDPG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +   L  +I    IK+   A  +  +A+  G+     S  + +  T  VV + 
Sbjct: 184 YFWSAMQNAVDLQTDIINCTIKSAVFALTVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|152999232|ref|YP_001364913.1| hypothetical protein Shew185_0693 [Shewanella baltica OS185]
 gi|160873845|ref|YP_001553161.1| hypothetical protein Sbal195_0723 [Shewanella baltica OS195]
 gi|217971905|ref|YP_002356656.1| hypothetical protein Sbal223_0714 [Shewanella baltica OS223]
 gi|304411204|ref|ZP_07392819.1| protein of unknown function DUF140 [Shewanella baltica OS183]
 gi|307306499|ref|ZP_07586242.1| protein of unknown function DUF140 [Shewanella baltica BA175]
 gi|151363850|gb|ABS06850.1| protein of unknown function DUF140 [Shewanella baltica OS185]
 gi|160859367|gb|ABX47901.1| protein of unknown function DUF140 [Shewanella baltica OS195]
 gi|217497040|gb|ACK45233.1| protein of unknown function DUF140 [Shewanella baltica OS223]
 gi|304350397|gb|EFM14800.1| protein of unknown function DUF140 [Shewanella baltica OS183]
 gi|306910790|gb|EFN41218.1| protein of unknown function DUF140 [Shewanella baltica BA175]
 gi|315266072|gb|ADT92925.1| protein of unknown function DUF140 [Shewanella baltica OS678]
          Length = 261

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 74/255 (29%), Positives = 124/255 (48%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I      +       G              + +     L+RQ+Y VGV  + ++++   
Sbjct: 6   SIADLGRSAIELVLGFGRAGLMLWGAIFRWPRVRKGFPLLVRQIYVVGVQSMVIILVSGL 65

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L  FG E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 66  FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 125

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +I+PR WA +IS+PLL ++     I G  IV  ++  I    
Sbjct: 126 STEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLALMFTAVGIYGGHIVGVEWKGIDSGA 185

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++     +I   LIK+   A  +  +A+  G+ V  +   + +  T  VVQS  
Sbjct: 186 FWSILQASVEWRQDIVNCLIKSGVFAVVVTWIALYRGYQVIPNPEGISRATTQTVVQSSL 245

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D L     F 
Sbjct: 246 AVLALDFLLTALMFG 260


>gi|126175856|ref|YP_001052005.1| hypothetical protein Sbal_3661 [Shewanella baltica OS155]
 gi|125999061|gb|ABN63136.1| protein of unknown function DUF140 [Shewanella baltica OS155]
          Length = 261

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 74/255 (29%), Positives = 124/255 (48%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I      +       G              + +     L+RQ+Y VGV  + ++++   
Sbjct: 6   SIANLGRSAIELVLGFGRAGLMLWGAIFRWPRVRKGFPLLVRQIYVVGVQSMVIILVSGL 65

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L  FG E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 66  FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 125

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +I+PR WA +IS+PLL ++     I G  IV  ++  I    
Sbjct: 126 STEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLALMFTAVGIYGGHIVGVEWKGIDSGA 185

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++     +I   LIK+   A  +  +A+  G+ V  +   + +  T  VVQS  
Sbjct: 186 FWSILQASVEWRQDIVNCLIKSGVFAVVVTWIALYRGYQVIPNPEGISRATTQTVVQSSL 245

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D L     F 
Sbjct: 246 AVLALDFLLTALMFG 260


>gi|326795053|ref|YP_004312873.1| hypothetical protein Marme_1781 [Marinomonas mediterranea MMB-1]
 gi|326545817|gb|ADZ91037.1| protein of unknown function DUF140 [Marinomonas mediterranea MMB-1]
          Length = 260

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 81/257 (31%), Positives = 134/257 (52%), Gaps = 2/257 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
           KK+         Q   +G       +  A    ++      L+ Q+Y VGV  + +VI+ 
Sbjct: 2   KKVRNVGQSLFDQLESIGRAGIFLFQTLARLPVRWDESCRLLVNQVYSVGVLSLVIVIVS 61

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
               G V+A QG   L++FG+E     L+++  LRE+G ++TA++ AGR+GSA+ AEIG 
Sbjct: 62  GCFIGMVLALQGYTILAKFGSEQAVGQLLALSLLRELGPVVTALLFAGRAGSALTAEIGL 121

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           MK  E++ +   MG+D +R +I+PR  A +I +PLL ++ + + I+G  +V   +  I  
Sbjct: 122 MKATEQLSSYEMMGVDPLRRVIAPRFIAGMICMPLLCLIFSATGILGGMLVSVHWLGIYD 181

Query: 295 AVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
             F+S    +     ++F G+IK+ F ACAI  +A+ +GF     S  +GK  T  VV  
Sbjct: 182 GSFWSLMQQSVYFDIDVFNGIIKSIFFACAITWIAVYQGFECDPTSEGIGKATTRTVVLG 241

Query: 354 ISIVIIIDSLFAIFYFA 370
              V+ +D +     F 
Sbjct: 242 SLAVLFLDFILTAAMFG 258


>gi|332163079|ref|YP_004299656.1| hypothetical protein YE105_C3459 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325667309|gb|ADZ43953.1| hypothetical protein YE105_C3459 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330862752|emb|CBX72894.1| UPF0393 inner membrane protein yrbE [Yersinia enterocolitica
           W22703]
          Length = 260

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        +     G              + +     L++Q+Y VGV  + ++++  
Sbjct: 4   QALASLGRRGINVCASFGRAGLMLFNALVGRPEPRKQWPLLVKQLYSVGVQSLLIIVVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++S+  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +++PR WA +IS+PLLT +     I G S+V   +  I   
Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDGG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   S      ++   LIK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQSAVEWRTDLLNCLIKSLVFAVTVTWIALFNGYDAVPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|297844946|ref|XP_002890354.1| hypothetical protein ARALYDRAFT_472206 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336196|gb|EFH66613.1| hypothetical protein ARALYDRAFT_472206 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 350

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 55/232 (23%), Positives = 113/232 (48%)

Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198
            G+      K K    + ++Q+   G   + V +L S   G     Q   + ++ G    
Sbjct: 109 AGQVVLRILKGKIHWRNTLQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFTRLGLNRS 168

Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258
              ++++   RE+  ++T++++AGR GSA  AE+G+M+++E+ D +R +G D +  LI+P
Sbjct: 169 IGGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADPIDYLITP 228

Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318
           R+ A  ++LP LT++     +  ++++    Y I   +     H      +I + +IK+ 
Sbjct: 229 RVIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMDSAHRALRPWDIVSAMIKSQ 288

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                I +++   G      +  +G+  T+ VV S+  + I D + + F+F 
Sbjct: 289 VFGAIISVISCSWGVTTTGGAKGVGESTTSAVVMSLVGIFIADFVLSSFFFQ 340


>gi|123443934|ref|YP_001007905.1| hypothetical protein YE3751 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122090895|emb|CAL13777.1| putative membrane protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 260

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        +     G              + +     L++Q+Y VGV  + ++++  
Sbjct: 4   QALASLGRRGINVCASFGRAGLMLFNALVGRPEPRKQWPLLVKQLYSVGVQSLLIIVVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++S+  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +++PR WA +IS+PLLT +     I G S+V   +  I   
Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDGG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   S      ++   LIK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQSAVEWRTDLLNCLIKSLVFAITVTWIALFNGYDAVPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|167031981|ref|YP_001667212.1| hypothetical protein PputGB1_0966 [Pseudomonas putida GB-1]
 gi|166858469|gb|ABY96876.1| protein of unknown function DUF140 [Pseudomonas putida GB-1]
          Length = 265

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +++      +     +LG                 G    L +Q+Y VGV  + +V++  
Sbjct: 8   ERVRLLGRSAIDVLAVLGRSCLFLFHALVGRGGIGGGFQLLTKQLYSVGVLSLAIVVVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+M
Sbjct: 68  VFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +++PR+WA  ISLPLL ++ +   I G S V   +  +   
Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 187

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F++   ++ +   ++  GL+K+   A     +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SFWANMQNSVSFTDDVLNGLVKSLVFAFVTTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|170717850|ref|YP_001784909.1| hypothetical protein HSM_1589 [Haemophilus somnus 2336]
 gi|168825979|gb|ACA31350.1| protein of unknown function DUF140 [Haemophilus somnus 2336]
          Length = 261

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 73/258 (28%), Positives = 126/258 (48%), Gaps = 1/258 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + I             LG              + +     LI+Q+Y +GV  + +++L  
Sbjct: 3   RVISSLGRWGMDFCRSLGRAGFMLFGALVGKQQMRKHFPLLIKQLYVLGVQSLLIIMLSG 62

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 63  LFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 122

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +ISPR WA +IS+P+L ++     I G S+V   +  +   
Sbjct: 123 KATEQLSSLEMMAVDPLRRVISPRFWAGVISMPILAVIFTAIGIWGGSLVGVDWKGVDAG 182

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   ++ +   ++  G IK+   A A+  +A+  G+     S  + K  T  VV + 
Sbjct: 183 SFWSVMQNSVSWGYDLLNGCIKSLCFAIAVVWIALFNGYDCIPTSEGISKATTKTVVHAS 242

Query: 355 SIVIIIDSLFAIFYFAIG 372
            +V+ +D +     F  G
Sbjct: 243 LVVLGLDFVLTALMFGAG 260


>gi|269960373|ref|ZP_06174747.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269834984|gb|EEZ89069.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 263

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 76/267 (28%), Positives = 132/267 (49%), Gaps = 8/267 (2%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
           +SF      +G++ +           +L       G         K F L LI+Q+Y VG
Sbjct: 3   DSFIQFVASLGRRTLAICEAFGRATLML------IGALVTRPQPIKNFPL-LIKQLYSVG 55

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
           V  + ++++     G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR+
Sbjct: 56  VQSLAIIVVSGLFIGMVLSLQGYVVLVDYGAEGSLGQMVALSLLRELGPVVTALLFAGRA 115

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           GSA+ AEIG MK  E++ ++  M +D ++ +I+PR WA +IS+PLL ++     I GA I
Sbjct: 116 GSALTAEIGLMKATEQLSSMEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGAQI 175

Query: 285 VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           V   +  +    F++   S+  L  +I   +IK    A  +  +A+  G+     S  + 
Sbjct: 176 VGVDWKGVDHGSFWAAMQSSVELGQDIGNSMIKCIVFAITVTWIALFNGYDAIPTSEGIS 235

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  T  VV S   V+ +D +     F 
Sbjct: 236 RATTRTVVHSSLAVLGLDFVLTALMFG 262


>gi|238756123|ref|ZP_04617444.1| hypothetical protein yruck0001_2780 [Yersinia ruckeri ATCC 29473]
 gi|238705662|gb|EEP98058.1| hypothetical protein yruck0001_2780 [Yersinia ruckeri ATCC 29473]
          Length = 260

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 121/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        +     G              + +     L++Q+Y VGV  + ++++  
Sbjct: 4   QTLASVGRKGINVCATFGRAGLMLFNAIVGRPQLRQQWPLLVKQLYSVGVQSLLIIMVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++S+  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +++PR WA +IS+PLLT +     I G S+V   +  I   
Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDSG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S          ++   LIK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQGAVEWRTDLLNCLIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|157963422|ref|YP_001503456.1| hypothetical protein Spea_3608 [Shewanella pealeana ATCC 700345]
 gi|157848422|gb|ABV88921.1| protein of unknown function DUF140 [Shewanella pealeana ATCC
           700345]
          Length = 261

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 127/255 (49%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I +    +      LG              +F+     L++Q+Y +GV  + ++I+   
Sbjct: 6   HIARLGRAAIELVIGLGQAGLMLWGAIVHRPRFRKGTPLLLKQLYVIGVQSMVIIIVSGL 65

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L  FG E     ++++  LRE+G ++TA++ AGR+GSA+ AE+G MK
Sbjct: 66  FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAELGLMK 125

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +I+PR WA +ISLPLL ++     I G  +V  ++  I    
Sbjct: 126 STEQLSSLEMMAIDPLRQIIAPRFWAGVISLPLLALMFTAVGIYGGHLVGVEWKGIDSGS 185

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++     +I   +IK+   A  +  +A+  G+ V  +   + +  T  VVQS  
Sbjct: 186 FWSILQASVEWREDIVNCIIKSLLFAVVVTWIALYRGYHVIPNPEGISRATTQTVVQSSL 245

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D L     F 
Sbjct: 246 AVLALDFLLTAVMFG 260


>gi|50119256|ref|YP_048423.1| hypothetical protein ECA0296 [Pectobacterium atrosepticum SCRI1043]
 gi|49609782|emb|CAG73216.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043]
          Length = 260

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        S +   G              +F+     L++Q+Y VGV  + ++I+  
Sbjct: 4   RTLASLGRQGISASASFGRAGLMLFNALVGKPEFRKQWPLLVKQLYSVGVQSLLIIIVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYIILTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +++PR WA +IS+PLL ++     I G ++V   +  I   
Sbjct: 124 KATEQLSSMEMMAVDPLRRVVAPRFWAGLISMPLLAVIFVAVGIWGGALVGVDWKGIDSG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S          ++   +IK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQGAVDWRQDVLNCVIKSIVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|117919131|ref|YP_868323.1| hypothetical protein Shewana3_0679 [Shewanella sp. ANA-3]
 gi|117611463|gb|ABK46917.1| protein of unknown function DUF140 [Shewanella sp. ANA-3]
          Length = 261

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 125/255 (49%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I      +       G              + +     L+RQ+Y VGV  + ++++   
Sbjct: 6   SIADLGRSAIDLVLGFGRAGLMLWGAIFRWPRVRKGFPLLVRQIYVVGVQSMVIIVVSGL 65

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L  FG E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 66  FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 125

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +I+PR WA +IS+PLL ++     I G  +V  ++  I    
Sbjct: 126 STEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLALMFTAVGIYGGHLVGVEWKGIDGGA 185

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++     +I   LIK+   A  +  +A+  G+ V  +   + +  T+ VVQS  
Sbjct: 186 FWSILQASVEWRQDIVNCLIKSGVFAVVVTWIALYRGYQVVPNPEGISRATTSTVVQSSL 245

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D L     F 
Sbjct: 246 AVLALDFLLTALMFG 260


>gi|113969024|ref|YP_732817.1| hypothetical protein Shewmr4_0680 [Shewanella sp. MR-4]
 gi|114048831|ref|YP_739381.1| hypothetical protein Shewmr7_3342 [Shewanella sp. MR-7]
 gi|113883708|gb|ABI37760.1| protein of unknown function DUF140 [Shewanella sp. MR-4]
 gi|113890273|gb|ABI44324.1| protein of unknown function DUF140 [Shewanella sp. MR-7]
          Length = 261

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 125/255 (49%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I      +       G              + +     L+RQ+Y VGV  + ++++   
Sbjct: 6   SIADLGRSAIELVLGFGRAGLMLWGAIVRWPRVRKGFPLLVRQIYVVGVQSMVIIVVSGL 65

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L  FG E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 66  FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 125

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +I+PR WA +IS+PLL ++     I G  +V  ++  I    
Sbjct: 126 STEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLALMFTAVGIYGGHLVGVEWKGIDGGA 185

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++     +I   LIK+   A  +  +A+  G+ V  +   + +  T+ VVQS  
Sbjct: 186 FWSILQASVEWRQDIVNCLIKSGVFAVVVTWIALYRGYQVVPNPEGISRATTSTVVQSSL 245

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D L     F 
Sbjct: 246 AVLALDFLLTALMFG 260


>gi|197287459|ref|YP_002153331.1| hypothetical protein PMI3656 [Proteus mirabilis HI4320]
 gi|194684946|emb|CAR47136.1| putative membrane protein [Proteus mirabilis HI4320]
          Length = 259

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 69/254 (27%), Positives = 122/254 (48%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           + +    S S     G              +F+     L++Q+Y VGV  + ++++    
Sbjct: 5   LARLGARSLSIFATFGRAGIMLFRALIGKPEFRKQWPLLMKQLYSVGVQSLLIIMVSGLF 64

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L+ F AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 65  IGMVLGLQGYLVLTTFSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 124

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+I ++  M +D +R +++PR WA  IS+PLL+++     I G +IV   +  I    F
Sbjct: 125 TEQISSLEMMAVDPLRRVVAPRFWAGFISMPLLSLIFVAVGIWGGAIVGVDWKGIDEGFF 184

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           ++          ++    IK+   A  +  +A+  G+     S  + +  T  VV S   
Sbjct: 185 WASMQGAVEWQKDLVNCFIKSVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLA 244

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 245 VLGLDFVLTALMFG 258


>gi|258593363|emb|CBE69702.1| toluene transporter subunit: membrane component of ABC superfamily
           [NC10 bacterium 'Dutch sediment']
          Length = 247

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 81/244 (33%), Positives = 136/244 (55%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              +LG +   T +    +         LIRQ+ ++GV  + +  + +  TG V+A Q A
Sbjct: 1   MLELLGGLSQLTYDTVCCACTPPFNPRELIRQVDHIGVKSISIAGVAAAFTGLVLALQTA 60

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
           + LS+FGA+ +   ++S+  +RE+G +LTA+++ GR GS I AE+GSMK+ E+IDA+R M
Sbjct: 61  YGLSRFGAKAYVGIIVSLSMVRELGPVLTALLVGGRVGSGITAELGSMKVTEQIDAMRAM 120

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G + V+ L+ PR+ + ++ LPLLT++A+   I+G  ++    + + +  +++      TL
Sbjct: 121 GANPVKKLVVPRVLSTMLVLPLLTVMADILGILGGMVISKYEFQVDYHFYYNTVTRNLTL 180

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           A+I +GL K       I IV   +G A    +  LGK  T  VV S   VII D     F
Sbjct: 181 ADIVSGLGKTVVFGFIIAIVGCYKGLATVGGTEGLGKATTATVVTSAIAVIISDFFLTKF 240

Query: 368 YFAI 371
           ++ +
Sbjct: 241 FWWL 244


>gi|188532480|ref|YP_001906277.1| ABC transporter, permease subunit, probable toluene tolerance
           protein [Erwinia tasmaniensis Et1/99]
 gi|188027522|emb|CAO95369.1| ABC transporter, permease subunit, probable toluene tolerance
           protein [Erwinia tasmaniensis Et1/99]
          Length = 260

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        +     G              +F+     L++Q+Y +GV  + +V++  
Sbjct: 4   QALASLGRQGINFCASFGRAGLMLFHALFGIPRFRKHAPLLVKQLYSIGVLSLLIVVVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L  + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLVLKTYSAETSLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +ISPR WA  IS+PLLT++     I+G ++V   +  I   
Sbjct: 124 KATEQLSSMEMMAVDPLRRIISPRFWAGFISMPLLTLIFVAVGILGGALVGVSWKGIDPG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +   L  +I    IK+   A  +  +A+  G+     S  + +  T  VV + 
Sbjct: 184 FFWSAMQNAVDLRTDIINCTIKSAVFALTVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|113461315|ref|YP_719384.1| ABC transporter permease [Haemophilus somnus 129PT]
 gi|112823358|gb|ABI25447.1| permease component, possible ABC transporter [Haemophilus somnus
           129PT]
          Length = 261

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 72/258 (27%), Positives = 127/258 (49%), Gaps = 1/258 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + I             LG              + +     LI+Q+Y +GV  + +++L  
Sbjct: 3   RVISSLGRWGMDFCRSLGRAGFMLFGALVGKQQMRKHFPLLIKQLYVLGVQSLLIIMLSG 62

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 63  LFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 122

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +ISPR WA +IS+P+L ++     I G S++   +  +   
Sbjct: 123 KATEQLSSLEMMAVDPLRRVISPRFWAGVISMPILAVIFTAIGIWGGSLIGVDWKGVDAG 182

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   ++ + + ++  G IK+   A A+  +A+  G+     S  + K  T  VV + 
Sbjct: 183 SFWSVMQNSVSWSYDLLNGFIKSLCFAIAVVWIALFNGYDCIPTSEGISKATTKTVVHAS 242

Query: 355 SIVIIIDSLFAIFYFAIG 372
            +V+ +D +     F  G
Sbjct: 243 LVVLGLDFVLTALMFGAG 260


>gi|238764271|ref|ZP_04625223.1| hypothetical protein ykris0001_25370 [Yersinia kristensenii ATCC
           33638]
 gi|238697552|gb|EEP90317.1| hypothetical protein ykris0001_25370 [Yersinia kristensenii ATCC
           33638]
          Length = 260

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        +     G              + +     L++Q+Y VGV  + ++++  
Sbjct: 4   QALASLGRRGINVCVSFGRAGLMLFNALVGRPEPRKQWPLLVKQLYSVGVQSLLIIVVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++S+  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +++PR WA +IS+PLLT +     I G S+V   +  I   
Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDSG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   S      ++   LIK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQSAVEWRTDLLNCLIKSLVFAITVTWIALFNGYDAVPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|90580197|ref|ZP_01236004.1| hypothetical protein VAS14_19736 [Vibrio angustum S14]
 gi|90438499|gb|EAS63683.1| hypothetical protein VAS14_19736 [Vibrio angustum S14]
          Length = 260

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 74/255 (29%), Positives = 129/255 (50%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I         +   +G           S  + +     LI+Q+Y VGV  + ++++   
Sbjct: 5   AIAHLGRSGIEKCQTMGRATLMLFGALVSKPQPRKMFPLLIKQLYSVGVLSIAIILVSGL 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V++ QG   L+ FGAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 65  FIGMVLSLQGYLVLADFGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +I+PR WA +IS+PLL ++ +   + GA IV   +  I +  
Sbjct: 125 ATEQLSSMEMMAVDPLRRVIAPRFWAGVISMPLLALMFSVVGLWGAQIVGVDWKGIDYGS 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   S+   + +I   +IKA   A  +  +A+  G+     S  + +  T  VV S  
Sbjct: 185 FWSVMQSSVNFSYDIGNSIIKAVAFAITVTWIAVFNGYDAVPTSEGISRATTRTVVNSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFILTALMFG 259


>gi|261250143|ref|ZP_05942719.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           orientalis CIP 102891]
 gi|260939259|gb|EEX95245.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           orientalis CIP 102891]
          Length = 262

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 73/254 (28%), Positives = 126/254 (49%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +      S +     G          AS  +    L  LI+Q+Y VGV  + +++L    
Sbjct: 8   VASVGQRSMAICESFGRASLMLFGAIASRPQPIKNLPLLIKQLYSVGVQSLIIIVLSGLF 67

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V++ QG   L  FGAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 68  IGMVLSLQGYVILVDFGAEGALGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 127

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D ++ +I+PR WA +IS+P+L ++     I G  +V   +  I    F
Sbjct: 128 TEQLSSMEMMAVDPLKRVIAPRFWAGVISMPMLAMIFMAVGIWGGQLVGVDWKGIDHGSF 187

Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   ++  L  +I   +IK+   A  +  +A+  G+     S  + +  T  VV S   
Sbjct: 188 WSAMQASVELGQDIGNSMIKSVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLA 247

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 248 VLGLDFVLTALMFG 261


>gi|253686687|ref|YP_003015877.1| hypothetical protein PC1_0282 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251753265|gb|ACT11341.1| protein of unknown function DUF140 [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 260

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 66/256 (25%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        S +   G              +F+     L++Q+Y VGV  + ++++  
Sbjct: 4   RTLASLGRQGISTSAAFGRAGLMLFNALVGKPEFRKQWPLLVKQLYSVGVQSLLIIMVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYIVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +++PR WA +IS+PLL ++     I G ++V   +  I   
Sbjct: 124 KATEQLSSMEMMAVDPLRRVVAPRFWAGLISMPLLAVIFVAVGIWGGALVGVDWKGIDSG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S          ++   +IK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQGAVDWRQDVLNCVIKSVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|294139194|ref|YP_003555172.1| hypothetical protein SVI_0423 [Shewanella violacea DSS12]
 gi|293325663|dbj|BAJ00394.1| conserved hypothetical protein [Shewanella violacea DSS12]
          Length = 258

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 76/255 (29%), Positives = 126/255 (49%), Gaps = 2/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +             LG              + KGF L  ++Q+Y VGV  + ++++   
Sbjct: 4   SLANLGRGGIDLVTGLGRAGLMLWGAVVRKPRLKGFSL-FVKQLYVVGVQSMVLILISGL 62

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L  FG E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 63  FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 122

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +I+PR WA ++SLPLLT++     I G  +V  ++  I    
Sbjct: 123 STEQLSSLEMMAIDPLRQIIAPRFWAGVVSLPLLTLMFTAVGIYGGHLVGVEWKGIDSGS 182

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++     +I   LIK+      +  +A+  G+ V  +   + K  T  VVQS  
Sbjct: 183 FWSILQASVEWRQDIVNCLIKSFLFGIVVTWIALYRGYQVTPNPEGISKATTQTVVQSSL 242

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D L     F 
Sbjct: 243 AVLALDFLLTALMFG 257


>gi|56710306|dbj|BAD81021.1| permease component of ABC-type transport system [uncultured
           bacterium]
          Length = 405

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 94/368 (25%), Positives = 167/368 (45%), Gaps = 17/368 (4%)

Query: 3   ENGITVFRFAGNWK----SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI 58
           +    V   +G W+    +P  + +A+  + A   + Q+    VD +A+   D+     +
Sbjct: 38  QGDSLVVALSGAWQLGRPAPRFAPLAESALSAGTGATQTARVTVDAAALGSWDSSLLIFL 97

Query: 59  M---YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIG 115
                F E +        +   I  L +L      + +  + P           L   +G
Sbjct: 98  RQGQEFCEAHKLDFVTDALPDRITSLLALARAVPERAVDAEVPALP--------LRARVG 149

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
              V   + S +    LG V+           + +     ++ Q    G   +P+V LI+
Sbjct: 150 LAGVSAWDASMAAVTFLGEVLQRGALLLRGRVRMRWREFWVVVQ--SNGSGALPIVTLIA 207

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
            + G +IA  G   L +FGA  ++  L+    LRE+G L+T ++IAGR+G+A  AE+GSM
Sbjct: 208 LLVGVIIAFLGVVVLKRFGAGYYASYLVGFGMLREMGALMTGIIIAGRTGAAFAAELGSM 267

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           KI EEIDA+ T+G+  V  L+ PR+  L + +PLL + A+   I+G   V     D+   
Sbjct: 268 KITEEIDALTTLGISPVDHLVLPRVLGLFVMMPLLVVYADLVGIVGGMGVAVAMLDVTPT 327

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            F +   +   L++   G+ K       IG+    +G   G  + ++G+  T+ VV SI+
Sbjct: 328 QFMNGLLTAVVLSDALLGVFKGLIFGAIIGLAGCMKGLQAGSDAGAVGRAATSAVVISIT 387

Query: 356 IVIIIDSL 363
           +VI+ +++
Sbjct: 388 LVILANAV 395


>gi|18149137|dbj|BAB83590.1| toluene resistance protein Trg1 [Pseudomonas putida]
 gi|269200089|gb|ACZ28672.1| Ttg2B [Pseudomonas putida]
          Length = 265

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +++      +     +LG                 G    L +Q+Y VGV  + +V++  
Sbjct: 8   ERVRLLGRSAIDVLAVLGRSCLFLFHALVGRGGIGGGFQLLTKQLYSVGVLSLAIVVVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+M
Sbjct: 68  VFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +++PR+WA  ISLPLL ++ +   I G S V   +  +   
Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 187

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F++   ++ +   ++  GL+K+   A     +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SFWANMQNSVSFTDDVLNGLVKSVVFAFVSTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|39995923|ref|NP_951874.1| hypothetical protein GSU0817 [Geobacter sulfurreducens PCA]
 gi|39982687|gb|AAR34147.1| conserved hypothetical protein [Geobacter sulfurreducens PCA]
 gi|298504937|gb|ADI83660.1| transporter membrane protein of unknown function DUF140 [Geobacter
           sulfurreducens KN400]
          Length = 257

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 70/263 (26%), Positives = 129/263 (49%), Gaps = 7/263 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             +    IG   +  + +       L   + N                 + +Q++++G  
Sbjct: 2   LVSSIEKIGALTLFVVREMGKMLIFLTYALVNIVIRPGKPIH-------IYKQIHFIGAK 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + V++L +  TG V+  QG + L++FG+E      +++  +RE+G +L+A+M+ GR+GS
Sbjct: 55  SLFVIVLTAAFTGMVLGLQGYYTLAKFGSEGMLGSAVALSLIRELGPVLSALMVVGRAGS 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           AI AEIG  KI E+IDA++TM L+  + L+SP+I A +I+LPLL  + +   I G  +V 
Sbjct: 115 AITAEIGIKKITEQIDALKTMALEPFKYLVSPKILAALIALPLLCAIFDVVGIYGGYVVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
            K   +    +FS    +    ++++G++K+      I  V   +G+     +  + +  
Sbjct: 175 VKLLGVNPGAYFSEMERSVEWKDVWSGIVKSFSFGGIIAWVCCYKGYHASHGAEGVSRAT 234

Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369
           T  VV S  +V+I D        
Sbjct: 235 TEAVVMSSVLVLIWDYFLTSVML 257


>gi|268590740|ref|ZP_06124961.1| toluene tolerance ABC efflux transporter, permease [Providencia
           rettgeri DSM 1131]
 gi|291313512|gb|EFE53965.1| toluene tolerance ABC efflux transporter, permease [Providencia
           rettgeri DSM 1131]
          Length = 260

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K I  F           G              +F+     L++Q+Y +GV  + ++ +  
Sbjct: 4   KAIAAFGRRWIDIFSAFGRAGYMLFRALLGKPEFRKQWPLLMKQLYAIGVQSLLIIAVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ F AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLVLTTFSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +I+PR WA  IS+PLL+++     I+G ++V   +  I   
Sbjct: 124 KATEQISSLEMMAVDPLRRVIAPRFWAGFISMPLLSLIFVAVGILGGALVGVDWKGIDEG 183

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F++   S+     ++   +IK+   A  +  +A+  G+     S  + +  T  VV + 
Sbjct: 184 FFWASMQSSVDWRLDLVNCVIKSLVFAITVTWIALFNGYDAIPTSEGISQATTRTVVHAS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LSVLGLDFVLTALMFG 259


>gi|145297399|ref|YP_001140240.1| ABC-type transporter, permease subunit [Aeromonas salmonicida
           subsp. salmonicida A449]
 gi|142850171|gb|ABO88492.1| ABC-type transporter, permease subunit [Aeromonas salmonicida
           subsp. salmonicida A449]
          Length = 259

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 71/255 (27%), Positives = 123/255 (48%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           ++ K           +G          A   + +     L++Q+Y VGV  V ++++   
Sbjct: 5   QVSKLGRVGVRVISSIGRATIMLFHALAGKPEPRKHFPLLLQQLYVVGVQSVAIILVSGL 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V++ QG   L  FGAE     L+S+  LRE+G ++T ++ AGR+GSA+ AEIG MK
Sbjct: 65  FIGMVLSLQGYNVLKDFGAEQSLGPLVSLSLLRELGPVVTGLLFAGRAGSALTAEIGLMK 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +++PR WA +IS+PLL  + +   I G  +V      +    
Sbjct: 125 ATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLAFMFSLIGIFGGKLVGVDLLGVDEGS 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++     +I  G IK+   A  +  +A+  G+     S  + +  T  VV S  
Sbjct: 185 FWSAMQASVDWQDDIMQGAIKSLIFALVVTWIALFNGYDAKPTSAGISQATTRTVVHSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFILTAVMFG 259


>gi|15605864|ref|NP_213241.1| hypothetical protein aq_355 [Aquifex aeolicus VF5]
 gi|2983037|gb|AAC06647.1| hypothetical protein aq_355 [Aquifex aeolicus VF5]
          Length = 245

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 75/242 (30%), Positives = 119/242 (49%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +G     T       +K    L   I Q+ YV     PVV++ S  TG VIA Q  
Sbjct: 4   FLEEVGRATLLTLWSIFFLFKKPPRLKHFISQLTYVAAETTPVVLVTSLFTGGVIALQTY 63

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
               +F AE     +++I   RE+G +LT++M+  R GSA+ A IG+M+I ++IDA+  M
Sbjct: 64  STFHRFNAEYLIGAVVAISMGRELGPVLTSLMVVARVGSAMTASIGTMRITQQIDALEVM 123

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
            ++ +  L++PRI+A    +PLLT+L++ + I G   V  K + +   +++ +       
Sbjct: 124 AINPISFLVTPRIFATTFGVPLLTVLSDVAGIFGGWFVATKLFGVNEYLYWQKMVDLTEF 183

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +I  GL KA F    IG V+   GF     +  +GK  T  VV S  +++I D      
Sbjct: 184 HDIVGGLYKATFFGFIIGAVSCYYGFYTKGGTAGVGKATTNSVVTSSMLILISDYFLTAV 243

Query: 368 YF 369
            F
Sbjct: 244 IF 245


>gi|148546241|ref|YP_001266343.1| hypothetical protein Pput_0998 [Pseudomonas putida F1]
 gi|148510299|gb|ABQ77159.1| protein of unknown function DUF140 [Pseudomonas putida F1]
          Length = 265

 Score =  234 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +++      +     +LG                 G    L +Q+Y VGV  + +V++  
Sbjct: 8   ERVRLLGRSAIDVLAVLGRSCLFLFHALVGRGGIGGGFQLLTKQLYSVGVLSLAIVVVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+M
Sbjct: 68  VFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +++PR+WA  ISLPLL ++ +   I G S V   +  +   
Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 187

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F++   ++ +   ++  GL+K+   A     +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SFWANMQNSVSFTDDVLNGLVKSLVFAFVSTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|300718605|ref|YP_003743408.1| toluene tolerance ABC transporter, permease subunit [Erwinia
           billingiae Eb661]
 gi|299064441|emb|CAX61561.1| toluene tolerance ABC transporter, permease subunit [Erwinia
           billingiae Eb661]
          Length = 257

 Score =  234 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 71/254 (27%), Positives = 125/254 (49%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +        +     G              +F+     LI+Q+Y +GV  + +V++    
Sbjct: 3   LRALGRQGINTCASFGRAGLMLFHALVGIPRFRKHAPLLIKQLYSIGVLSLLIVVVSGLF 62

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L+ +GA+     L+++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 63  IGMVLGLQGYLVLNTYGADSSLGMLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 122

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +ISPR WA  IS+PLLT++     I+G +IV   +  I    F
Sbjct: 123 TEQLSSMEMMAVDPLRRIISPRFWAGFISMPLLTLIFVAVGIMGGAIVGVSWKGIDSGFF 182

Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   +   +  +I   +IK+   A  +  +A+  G+     S  + +  T  VV +   
Sbjct: 183 WSAMQNAVDVRTDILNCVIKSAVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHASLA 242

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 243 VLGLDFVLTALMFG 256


>gi|227358279|ref|ZP_03842620.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Proteus mirabilis ATCC 29906]
 gi|227161615|gb|EEI46652.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Proteus mirabilis ATCC 29906]
          Length = 259

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 69/254 (27%), Positives = 122/254 (48%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           + +    S S     G              +F+     L++Q+Y VGV  + ++++    
Sbjct: 5   LAQLGARSLSIFATFGRAGIMLFRALIGKPEFRKQWPLLMKQLYSVGVQSLLIIMVSGLF 64

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L+ F AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 65  IGMVLGLQGYLVLTTFSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 124

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+I ++  M +D +R +++PR WA  IS+PLL+++     I G +IV   +  I    F
Sbjct: 125 TEQISSLEMMAVDPLRRVVAPRFWAGFISMPLLSLIFVAVGIWGGAIVGVDWKGIDEGFF 184

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           ++          ++    IK+   A  +  +A+  G+     S  + +  T  VV S   
Sbjct: 185 WASMQGAVEWQKDLVNCFIKSVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLA 244

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 245 VLGLDFVLTALMFG 258


>gi|323491744|ref|ZP_08096921.1| hypothetical protein VIBR0546_01054 [Vibrio brasiliensis LMG 20546]
 gi|323314000|gb|EGA67087.1| hypothetical protein VIBR0546_01054 [Vibrio brasiliensis LMG 20546]
          Length = 262

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 74/254 (29%), Positives = 126/254 (49%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +      + S     G          AS  +    L  LI+Q+Y VGV  + +++L    
Sbjct: 8   VASVGRRALSVTESFGRASLMLFGALASKPQPIKNLPLLIKQLYTVGVQSLIIIVLSGLF 67

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V++ QG   L  FGAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 68  IGMVLSLQGYVILVDFGAEGALGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 127

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D ++ +I+PR WA +IS+PLL ++     I G  +V   +  I    F
Sbjct: 128 TEQLSSMEMMAVDPLKRVIAPRFWAGVISMPLLVMIFMAVGIWGGQLVGVDWKGIDHGSF 187

Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   ++  L  +I   +IK+   A  +  +A+  G+     S  + +  T  VV S   
Sbjct: 188 WSAMQASVELGQDIGNSMIKSIVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLA 247

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 248 VLGLDFVLTALMFG 261


>gi|303256383|ref|ZP_07342397.1| ABC transporter, permease protein [Burkholderiales bacterium
           1_1_47]
 gi|331001491|ref|ZP_08325109.1| hypothetical protein HMPREF9439_02780 [Parasutterella
           excrementihominis YIT 11859]
 gi|302859874|gb|EFL82951.1| ABC transporter, permease protein [Burkholderiales bacterium
           1_1_47]
 gi|329568220|gb|EGG50037.1| hypothetical protein HMPREF9439_02780 [Parasutterella
           excrementihominis YIT 11859]
          Length = 354

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 94/348 (27%), Positives = 162/348 (46%), Gaps = 13/348 (3%)

Query: 26  DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLI 85
            +   +  +  S   I D S +T  D  G  L+     +     KL  VS  IE L++ +
Sbjct: 20  KIWEQVLGAESSGQTIFDASDLTFCDESGLTLLYELRSR-PDAFKLINVSASIETLYNTM 78

Query: 86  SFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCAS 145
                 K   +K            +   +GK +    + +      LG       +    
Sbjct: 79  LKNFSPKPVEKKS---------LGVVSSLGKWLYDAASSTKQSIIFLGSACCALTDVLLH 129

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
             + +     ++      G   V ++ LI F+ G +IA + A     FGA IF ++ + I
Sbjct: 130 PSQIR--FGEILSVSDEAGSRAVGIICLIGFLMGVIIAFETALVAQIFGAVIFVVNGIGI 187

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
              RE+G L+TA++ AGRSGSA  A++G+ K+NEE++A+ T GL  +  L+ PR+ A  +
Sbjct: 188 AMTRELGPLMTAILFAGRSGSAFAAQLGTQKVNEELNALTTFGLSPMYFLVVPRLIASSL 247

Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325
            +PLL++ A    I+G  +V+   YDI +  F+ +   + T+ +I  GL+KA      I 
Sbjct: 248 VVPLLSVFATILGILGGGLVM-AMYDITYTQFYVQLLKSVTVTDIVFGLVKAVIFGFVIA 306

Query: 326 IVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           ++  + G   G  + ++G   T  VV+SI  +++ID   A+    +GI
Sbjct: 307 LIGCQCGMNTGAGAAAVGSSTTKSVVKSIIWIVVIDGAAALLTNRLGI 354


>gi|26987695|ref|NP_743120.1| hypothetical protein PP_0959 [Pseudomonas putida KT2440]
 gi|24982381|gb|AAN66584.1|AE016286_8 toluene tolerance ABC efflux transporter, permease [Pseudomonas
           putida KT2440]
          Length = 266

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +++      +     +LG                 G    L +Q+Y VGV  + +V++  
Sbjct: 9   ERVRLLGRSAIDVLAVLGRSCLFLFHALVGRGGIGGGFQLLTKQLYSVGVLSLAIVVVSG 68

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+M
Sbjct: 69  VFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 128

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +++PR+WA  ISLPLL ++ +   I G S V   +  +   
Sbjct: 129 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 188

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F++   ++ +   ++  GL+K+   A     +A+ +G+     S  + +  T  VV + 
Sbjct: 189 SFWANMQNSVSFTDDVLNGLVKSVVFAFVSTWIAVFQGYDCEPTSEGISRATTKTVVYAS 248

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 249 LAVLGLDFILTALMFG 264


>gi|225433662|ref|XP_002265320.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 474

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 57/236 (24%), Positives = 111/236 (47%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
           V    G+        K   ++ ++Q+  VG   V V IL +   G     Q   + ++ G
Sbjct: 229 VFIMAGQVIIRILTGKVHWVNTLQQLERVGPRSVGVCILTAAFVGMAFTIQFVREFTRLG 288

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
                  ++++   RE+  ++T++++AGR GSA  AE+G+M+++E+ D +R +G + V  
Sbjct: 289 LNRSVGGVLALAFSRELSPVVTSIVVAGRIGSAFAAELGTMQVSEQTDTLRVLGTNPVDY 348

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L++PR+ A  I+LP LT+L     +  ++++    Y I   +            +I + +
Sbjct: 349 LVTPRVIASCIALPFLTLLCFTVGMASSALLADSVYGISINIILDSAQRALNSWDIISAM 408

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           IK+      I  V+   G      +  +G+  T+ VV S+  + I D   +  +F 
Sbjct: 409 IKSVAFGGIISTVSCAWGVTTMGGAKGVGESTTSAVVISLVGIFIADFALSYCFFQ 464


>gi|259907019|ref|YP_002647375.1| ABC transporter, permease subunit, probable toluene tolerance
           protein [Erwinia pyrifoliae Ep1/96]
 gi|224962641|emb|CAX54096.1| ABC transporter, permease subunit, probable toluene tolerance
           protein [Erwinia pyrifoliae Ep1/96]
 gi|283476814|emb|CAY72652.1| UPF0393 inner membrane protein yrbE [Erwinia pyrifoliae DSM 12163]
          Length = 260

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 70/256 (27%), Positives = 125/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        +    LG              +F+     L++Q+Y +GV  + +V++  
Sbjct: 4   QALASLGRQGINFCASLGRAGLMLFHALFGIPRFRKHAPLLVKQLYNIGVLSLLIVVVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L  +GAE     ++++  LRE+G +++A++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLILKTYGAEASLGMMVALSLLRELGPVVSALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +ISPR WA  IS+PLLT++     I+G ++V   +  I   
Sbjct: 124 KATEQLSSMEMMAVDPLRRIISPRFWAGFISMPLLTLIFVAVGILGGALVGVSWKGIDSG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +   L  +I    IK+   A  +  +A+  G+     S  + +  T  VV + 
Sbjct: 184 FFWSAMQNAVDLQTDIINCTIKSAVFAVTVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|78222008|ref|YP_383755.1| hypothetical protein Gmet_0788 [Geobacter metallireducens GS-15]
 gi|78193263|gb|ABB31030.1| protein of unknown function DUF140 [Geobacter metallireducens
           GS-15]
          Length = 257

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 66/263 (25%), Positives = 127/263 (48%), Gaps = 7/263 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
            +     +G   +    +       L + + N        +        + +Q++++G  
Sbjct: 2   LRTFLEKLGAVTIFIFREMGRMLIFLVMALVNIIIRPGRPFH-------IFKQIHFIGTK 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + V+ L +  TG V+  QG + L++FG+E      +++  +RE+G +LTA+M+ GR+GS
Sbjct: 55  SLFVITLTASFTGMVLGLQGYYTLAKFGSEGMLGSAVALSLIRELGPVLTALMVVGRAGS 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           AI AEIG MKI E+IDA++TM L+  + LISP+I   ++++PLL  + +   I G  +V 
Sbjct: 115 AITAEIGIMKITEQIDAMKTMALEPFKYLISPKIVGALVAVPLLCAIFDVVGIYGGYLVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
            K   +    +F     +    ++++G +K+      +  V   +G+     +  + +  
Sbjct: 175 VKLLGVNPGAYFHEMERSVEWKDVWSGFVKSISFGGILAWVCCYKGYHASHGAEGVSRAT 234

Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369
           T  VV S  +V++ D        
Sbjct: 235 TEAVVMSSVLVLVWDYFLTSVML 257


>gi|330446812|ref|ZP_08310463.1| mlaE [Photobacterium leiognathi subsp. mandapamensis svers.1.1.]
 gi|328491003|dbj|GAA04960.1| mlaE [Photobacterium leiognathi subsp. mandapamensis svers.1.1.]
          Length = 260

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 78/265 (29%), Positives = 134/265 (50%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N    IG+  +           +L       G   +     K F L L++Q+Y VGV 
Sbjct: 2   IVNAIARIGRSGIDKCQTIGRATLML------FGALVSKPQPVKMFPL-LMKQLYSVGVL 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++++     G V++ QG   L+ FGAE     ++++  LRE+G ++TA++ AGR+GS
Sbjct: 55  SMAIILVSGLFIGMVLSLQGYIVLADFGAETSLGQMVALSLLRELGPVVTALLFAGRAGS 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+PLL ++ +   + GA IV 
Sbjct: 115 ALTAEIGLMKATEQLSSMEMMAVDPLRRVIAPRFWAGVISMPLLALMFSVVGLWGAQIVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
             +  I +  F+S   S+   + +I   +IKA   A  +  +A+  G+     S  + + 
Sbjct: 175 VDWKGIDYGSFWSVMQSSVNFSYDIGNSIIKAVVFAITVTWIAVFNGYDAVPTSEGISRA 234

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV S   V+ +D +     F 
Sbjct: 235 TTRTVVNSSLAVLGLDFILTALMFG 259


>gi|261344896|ref|ZP_05972540.1| toluene tolerance ABC efflux transporter, permease [Providencia
           rustigianii DSM 4541]
 gi|282567036|gb|EFB72571.1| toluene tolerance ABC efflux transporter, permease [Providencia
           rustigianii DSM 4541]
          Length = 260

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 75/256 (29%), Positives = 122/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K I  F           G              +F      L++Q+Y VGV  + +V +  
Sbjct: 4   KAIAAFGRRWIETFAAFGRAGYMLFRALFGKPEFAKQWPLLMQQLYSVGVQSLLIVAVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ F AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLVLTTFSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +I+PR WA  IS+PLL+++     IIG +IV   +  I   
Sbjct: 124 KATEQISSLEMMAVDPLRRVIAPRFWAGFISMPLLSLIFVAVGIIGGAIVGVDWKGIDPG 183

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   S+     +I    IK+   A  +  +A+  G+     S  + +  T  VV + 
Sbjct: 184 FFWSSMQSSIEWRLDIVNCFIKSLVFAITVTWIALFNGYDAIPTSEGISRATTKTVVHAS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LSVLGLDFVLTALMFG 259


>gi|261819643|ref|YP_003257749.1| hypothetical protein Pecwa_0289 [Pectobacterium wasabiae WPP163]
 gi|261603656|gb|ACX86142.1| protein of unknown function DUF140 [Pectobacterium wasabiae WPP163]
          Length = 260

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 66/256 (25%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        S +   G              +F+     L++Q+Y VGV  + ++++  
Sbjct: 4   RTLASLGRQGISASAAFGRAGLMLFNALVGKPEFRKQWPLLVKQLYSVGVQSLLIIMVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYIILTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +++PR WA +IS+PLL ++     I G ++V   +  I   
Sbjct: 124 KATEQLSSMEMMAVDPLRRVVAPRFWAGLISMPLLAVIFVAVGIWGGALVGVDWKGIDSG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S          ++   +IK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQGAVDWRQDVLNCVIKSIVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|297537487|ref|YP_003673256.1| hypothetical protein M301_0292 [Methylotenera sp. 301]
 gi|297256834|gb|ADI28679.1| protein of unknown function DUF140 [Methylotenera sp. 301]
          Length = 268

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 78/273 (28%), Positives = 139/273 (50%), Gaps = 8/273 (2%)

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
           +S    S       IG ++V+ I    + A +  L I  +GE               +R+
Sbjct: 3   KSNPLVSIIKTLQGIGHRMVERIWRLGAGARLFFLTIVYSGESFKR-------FHLTMRE 55

Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219
           +Y  GV  + ++I+ +F  G V+A QG   L ++G+      L+S+  +RE+G ++TA++
Sbjct: 56  IYSTGVMSLLIIIVSAFFVGMVLALQGYNTLQKYGSSEAIGVLVSLSLVRELGPVVTALL 115

Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279
            AGR+G+AI AEIG MK  E++ A+  M ++ +  +++PR WA +IS+P+L  L +   I
Sbjct: 116 FAGRAGTAITAEIGLMKTTEQLSAMEMMAVNPIARVVAPRFWAGVISMPILATLFSMVGI 175

Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           +G  IV      +    F+S+  ++    ++I  G+IK+     A  ++A+ EGF     
Sbjct: 176 LGGYIVAVPLIGVDEGAFWSQMQASVDFQSDIVNGIIKSLVFGVACTMIALFEGFDAPPT 235

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           +  + +  T  VV S   V+ +D +   F   I
Sbjct: 236 AEGVSRATTRTVVISSLTVLGLDFVLTSFMLVI 268


>gi|291615986|ref|YP_003518728.1| YrbE [Pantoea ananatis LMG 20103]
 gi|291151016|gb|ADD75600.1| YrbE [Pantoea ananatis LMG 20103]
 gi|327396238|dbj|BAK13660.1| inner membrane protein YrbE [Pantoea ananatis AJ13355]
          Length = 260

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 68/256 (26%), Positives = 122/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K +              G               F+     LI+Q+Y +GV  + ++++  
Sbjct: 4   KALASLGRRGIGTCASFGRAGLMLFHALVGKPAFRKHFPLLIKQLYSIGVLSLVIIVVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ +GAE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLVLTTYGAETSLGMLVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R ++SPR WA  IS+PLL ++     I G ++V   +  I   
Sbjct: 124 KATEQLSSMEMMAVDPLRRVVSPRFWAGFISMPLLALIFTAVGITGGALVGVSWKGIDPG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +     +++   +IK+   A  +  +A+  G+     S  + +  T  VV + 
Sbjct: 184 FFWSAMQNAVDFRSDVVNCIIKSAVFAVTVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|226943414|ref|YP_002798487.1| organic solvent tolerance ABC efflux transporter, permease
           [Azotobacter vinelandii DJ]
 gi|226718341|gb|ACO77512.1| organic solvent tolerance ABC efflux transporter, permease
           component [Azotobacter vinelandii DJ]
          Length = 265

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 68/260 (26%), Positives = 132/260 (50%), Gaps = 1/260 (0%)

Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171
             + +++      +      LG                 G    L++Q++ +GV  +P++
Sbjct: 4   RSLFEQVGLLGRAAIDVIEALGRSALFLMHATFGRSGAGGGFQLLVKQIHSIGVLSLPII 63

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
           ++     G V+A QG   L  +G+E     L+++  LRE+G ++T ++ AGR+GSA+ AE
Sbjct: 64  VVSGLFIGMVLALQGYNILVSYGSEQAVGQLVALTLLRELGPVVTGLLFAGRAGSALTAE 123

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           IG+MK  E++ ++  +G+D ++ +I+PR+WA  +S+PLL  + N   I GA++V   +  
Sbjct: 124 IGNMKSTEQLSSLEMIGVDPLKYIIAPRLWAGFLSMPLLAAIFNVVGIWGAAMVAVDWLG 183

Query: 292 IPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
           +    F++   S+  L  ++  G IK+   A  +  +A+ +G+     S  +G+  T  V
Sbjct: 184 VYDGSFWASMQSSVDLYDDVVNGAIKSIAFAFVVTWIAVFQGYDCEPTSEGIGRATTRTV 243

Query: 351 VQSISIVIIIDSLFAIFYFA 370
           V +   V+ +D +     F 
Sbjct: 244 VYASLAVLGLDFILTALMFG 263


>gi|313497328|gb|ADR58694.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
          Length = 265

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +++      +     +LG                 G    L +Q+Y VGV  + +V++  
Sbjct: 8   ERVRLLGRSAIDVLAVLGRSCLFLFHALVGRGGIGGGFQLLTKQLYSVGVLSLAIVVVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+M
Sbjct: 68  VFIGMVLALQGYSILAKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +++PR+WA  ISLPLL ++ +   I G S V   +  +   
Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 187

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F++   ++ +   ++  GL+K+   A     +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SFWANMQNSVSFTDDVLNGLVKSLVFAFVSTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|148977765|ref|ZP_01814321.1| putative ABC superfamily transport protein [Vibrionales bacterium
           SWAT-3]
 gi|145962979|gb|EDK28249.1| putative ABC superfamily transport protein [Vibrionales bacterium
           SWAT-3]
          Length = 259

 Score =  233 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 75/258 (29%), Positives = 128/258 (49%), Gaps = 2/258 (0%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           I K I      + +     G              + K F L L++Q+Y VGV  + ++++
Sbjct: 2   IAKTIAGVGKRTLAICESFGRASLMLFGALFGIPRLKNFPL-LVKQLYSVGVQSLAIILV 60

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
                G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG
Sbjct: 61  SGLFIGMVLSLQGYVVLIDYGAEGNLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIG 120

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
            MK  E+I ++  M +D ++ +I+PR+WA +IS+PLL ++     I G  +V   +  I 
Sbjct: 121 LMKATEQISSLEMMAVDPLKRIIAPRLWAGLISMPLLAMIFMAVGIWGGQLVGVDWKGID 180

Query: 294 FAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
              F+S   S+  L  +I   +IK    A  +  +A+  G+     S  + +  T  VV 
Sbjct: 181 HGSFWSAMQSSVELGRDIGNSMIKCMVFAITVTWIALFNGYDAVPTSEGISQATTRTVVH 240

Query: 353 SISIVIIIDSLFAIFYFA 370
           S   V+ +D +     F 
Sbjct: 241 SSLAVLGLDFVLTALMFG 258


>gi|322834661|ref|YP_004214688.1| hypothetical protein Rahaq_3972 [Rahnella sp. Y9602]
 gi|321169862|gb|ADW75561.1| protein of unknown function DUF140 [Rahnella sp. Y9602]
          Length = 260

 Score =  233 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 122/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K +        +     G              +F      LI+Q+Y VGV  + ++++  
Sbjct: 4   KALASVGRRGINTCASFGRAGLMLFRALVGKPQFAKQWPLLIKQLYSVGVLSLLIILVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AE+G M
Sbjct: 64  LFIGMVLGLQGYLILTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAELGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +++PR WA +IS+PLLT +     + G S+V   +  I   
Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGVWGGSLVGVDWKGIDSG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +      ++   LIK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQTAVDWRTDLLNCLIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|318604041|emb|CBY25539.1| uncharacterized ABC transporter, permease component YrbE [Yersinia
           enterocolitica subsp. palearctica Y11]
          Length = 260

 Score =  233 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        +     G              + +     L++Q+Y VGV  + ++++  
Sbjct: 4   QALASLGRRGINVCASFGRAGLMLFNALVGRPEPRKQWPLLVKQLYSVGVQSLLIIVVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++S+  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +++PR WA +IS+PLLT +     I G S+V   +  I   
Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDGG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   S      ++   LIK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQSAVEWRTDLLNCLIKSLVFAITVMWIALFNGYDAVPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|254362425|ref|ZP_04978534.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mannheimia haemolytica PHL213]
 gi|261494094|ref|ZP_05990597.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mannheimia haemolytica serotype A2 str. BOVINE]
 gi|261496065|ref|ZP_05992475.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|153094014|gb|EDN74930.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mannheimia haemolytica PHL213]
 gi|261308315|gb|EEY09608.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261310260|gb|EEY11460.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mannheimia haemolytica serotype A2 str. BOVINE]
          Length = 258

 Score =  233 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 76/264 (28%), Positives = 132/264 (50%), Gaps = 7/264 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N    IG  ++ FI      A +L       G       +F+     LI+Q+Y +GV 
Sbjct: 1   MVNFISSIGAVVINFIRTLGRSAFMLW------GALIGKP-EFRKHTPLLIKQLYVLGVQ 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + +++L     G V+  QG   L  F AE     L+S+  LRE+G ++TA++ AGR+GS
Sbjct: 54  SLLIIMLSGLFIGMVLGLQGYVVLVDFAAESSLGTLVSLSLLRELGPVVTALLFAGRAGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+P+L  +     I G S+V 
Sbjct: 114 ALTAEIGLMKATEQLSSLEMMAVDPLRRIIAPRFWAGVISMPVLAAIFTAIGIWGGSLVG 173

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
             +  +    F+S   ++   +++  G IK+   A A+  +A+  G+     S  + +  
Sbjct: 174 VDWKGVDGGSFWSVMQNSVNTSDLINGFIKSVIFAFAVVWIALFNGYDCVPTSEGISQAT 233

Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370
           T  VV +  +++ +D +     F 
Sbjct: 234 TRTVVNASLVILGLDFILTAIMFG 257


>gi|91791861|ref|YP_561512.1| hypothetical protein Sden_0497 [Shewanella denitrificans OS217]
 gi|91713863|gb|ABE53789.1| protein of unknown function DUF140 [Shewanella denitrificans OS217]
          Length = 265

 Score =  233 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 73/269 (27%), Positives = 134/269 (49%), Gaps = 8/269 (2%)

Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162
             +   N    +G+  + F+        +L   + +           +     L++Q+Y 
Sbjct: 3   KMSQLLNQIALVGQSAIAFMRGFGKAGLMLWGALFHI-------PNVRKGGPLLLKQIYV 55

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           +GV  + ++I+     G V+A QG   L  FG E     ++++  LRE+G ++TA++ AG
Sbjct: 56  LGVRSMIIIIVSGLFIGMVMALQGYNVLVGFGTEESLGPMVALSLLREMGPVVTALLFAG 115

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           R+GSA+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+PLL ++ +   I G 
Sbjct: 116 RAGSALTAEIGLMKSTEQLSSLEMMAIDPLRQVIAPRFWAGVISMPLLAVMFSLVGIYGG 175

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341
            +V  ++  I    F+S   ++     +I   LIK+   A  +  +A+  G+ V  +   
Sbjct: 176 HLVGVEWKGIDSGTFWSILQASIEWRQDIVNCLIKSTVFAVVVTWIALYRGYEVNPNPEG 235

Query: 342 LGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           + +  T+ VVQ+   V+ +D L     F 
Sbjct: 236 ISRATTSTVVQASLAVLGLDFLLTAIMFG 264


>gi|120602860|ref|YP_967260.1| hypothetical protein Dvul_1816 [Desulfovibrio vulgaris DP4]
 gi|120563089|gb|ABM28833.1| protein of unknown function DUF140 [Desulfovibrio vulgaris DP4]
          Length = 267

 Score =  233 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 72/243 (29%), Positives = 128/243 (52%), Gaps = 5/243 (2%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG +     +     +     L  ++ Q+Y +G   + V++LI   TG V+  QG + L 
Sbjct: 25  LGAMFIFMLDGFRHIFASTKQLPKIVNQVYVIGYKSLFVILLIGIFTGMVLGLQGYYTLV 84

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           +FG+E      +++  +RE+G +LTA+M+ GR+GS++ AEIG M+I ++IDA+  M ++ 
Sbjct: 85  KFGSEGLLGAAVALTLIRELGPVLTAIMVTGRAGSSMAAEIGVMRITDQIDALDVMDINP 144

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           +  L+SPRI A +++ PLLT L +   IIG  +       I   V+F R  ++  LA++ 
Sbjct: 145 MGYLVSPRIAASLVAFPLLTALFDVIGIIGGYVTGVMLLGINEGVYFHRIATSVELADVT 204

Query: 312 TGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
            G +K+   A  +  V+  +G+       G+    +    T+ VV S  +V++ D +   
Sbjct: 205 GGFMKSLLFALIVSTVSCYQGYFTHMRRDGMGPEGVSNSTTSAVVMSCVLVLVADYVLTS 264

Query: 367 FYF 369
           F  
Sbjct: 265 FLL 267


>gi|238751354|ref|ZP_04612847.1| hypothetical protein yrohd0001_15400 [Yersinia rohdei ATCC 43380]
 gi|238710412|gb|EEQ02637.1| hypothetical protein yrohd0001_15400 [Yersinia rohdei ATCC 43380]
          Length = 260

 Score =  233 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 121/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +              G              + +     L++Q+Y VGV  + ++++  
Sbjct: 4   QALASLGRRGIKVCASFGRAGLMLFNALVGRPEPRKQWPLLVKQLYSVGVQSLLIIVVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGFLILTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +++PR WA +IS+PLLT +     I G ++V   +  I   
Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGAVVGVDWKGIDGG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +      ++   LIK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQNAVEWRTDLLNCLIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|260914439|ref|ZP_05920908.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Pasteurella dagmatis ATCC
           43325]
 gi|260631540|gb|EEX49722.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Pasteurella dagmatis ATCC
           43325]
          Length = 260

 Score =  233 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 72/265 (27%), Positives = 129/265 (48%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             +    +G+  + F         +L       G       + K     L++Q++ +GV 
Sbjct: 1   MIDFISQLGRSAIDFCRSLGRAGFML------FGALVGKP-QIKKHFPLLVKQLHVLGVQ 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + +++L     G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GS
Sbjct: 54  SLLIIMLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+P+L ++     I G S+V 
Sbjct: 114 ALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPILAVIFTAIGIWGGSLVG 173

Query: 287 WKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
             +  +    F+S   +  T   ++  G IK+   A A+  +A+  G+     S  + K 
Sbjct: 174 VDWKGVDSGSFWSVMQNAVTWEKDLLNGFIKSLCFAIAVVWIALFNGYDCLPTSEGISKA 233

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV +  +V+ +D +     F 
Sbjct: 234 TTRTVVHASLVVLGLDFVLTALMFG 258


>gi|172039649|ref|YP_001806150.1| hypothetical protein cce_4736 [Cyanothece sp. ATCC 51142]
 gi|171701103|gb|ACB54084.1| DUF140-containing protein [Cyanothece sp. ATCC 51142]
          Length = 263

 Score =  233 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 68/248 (27%), Positives = 116/248 (46%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                    L   +   G+      K K    + + QM  VG   V + ++ +   G V 
Sbjct: 9   RGLGIWFERLVAAVLLGGQVFFHLLKTKIHRRNTLEQMSVVGPESVTIALITAGFVGMVF 68

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
             Q A +   FGA      ++++   RE+  +LTAV++AGR GSA  AEIG+M++ E+ID
Sbjct: 69  TIQVAREFISFGAASTVGGVLALALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQID 128

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +  D +  L+ PR+ A  + LP+L IL+  + + G  ++    YDI   VF +   
Sbjct: 129 ALYMLKTDPIDYLVVPRVLACCLMLPVLNILSLLTGMTGGLLIANGLYDISPYVFLTSVR 188

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           +   L ++ T +IK+      I ++    G      +  +G+  TT VV S+  V +I+ 
Sbjct: 189 NFLELWDLVTSMIKSVAFGGLIAVIGCSWGLTTTGGAKGVGQSTTTAVVTSLLAVFVINF 248

Query: 363 LFAIFYFA 370
             +   F 
Sbjct: 249 FLSWVMFQ 256


>gi|317494033|ref|ZP_07952449.1| hypothetical protein HMPREF0864_03218 [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316917806|gb|EFV39149.1| hypothetical protein HMPREF0864_03218 [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 260

 Score =  233 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 72/255 (28%), Positives = 121/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +  F     +     G              +F      L +Q+Y VGV  + ++I+   
Sbjct: 5   ALASFGRRGINVCASFGRAGLMMFNALIGKPEFAKQWPLLRKQLYSVGVQSLLIIIVSGL 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 65  FIGMVLGLQGYLILTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSAVTAEIGLMK 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E+I ++  M +D +R +++PR WA IIS+PLLT +     I G S+V   +  I    
Sbjct: 125 ATEQISSMEMMAVDPLRRIVAPRFWAGIISMPLLTAIFVAVGIWGGSVVGVDWKGIDSGF 184

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S    +     ++   +IK+   A  I  +A+  G+     S  + +  T  VV S  
Sbjct: 185 FWSAMQGSVDFHTDLVNCMIKSVVFAITIMWIALFNGYDAIPTSEGISRATTRTVVHSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|157372592|ref|YP_001480581.1| hypothetical protein Spro_4359 [Serratia proteamaculans 568]
 gi|157324356|gb|ABV43453.1| protein of unknown function DUF140 [Serratia proteamaculans 568]
          Length = 260

 Score =  233 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 68/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        + +   G              + +     L++QM+ VGV  + ++++  
Sbjct: 4   QALASLGRRGINTSASFGRAGLMLWGALVGRPEPRKQWPLLLKQMHSVGVQSLLIIMVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +++PR WA +IS+PLLT++     I G SIV   +  I   
Sbjct: 124 KATEQISSLEMMAVDPLRRIVAPRFWAGLISMPLLTLIFVAIGIWGGSIVGVDWKGIDGG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S          ++   L+K+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQGAVEWKKDLLNCLLKSVVFAITVTWIAIFNGYDAVPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|114328116|ref|YP_745273.1| ABC transporter permease [Granulibacter bethesdensis CGDNIH1]
 gi|114316290|gb|ABI62350.1| ABC transporter permease protein [Granulibacter bethesdensis
           CGDNIH1]
          Length = 392

 Score =  233 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 86/375 (22%), Positives = 166/375 (44%), Gaps = 16/375 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           SE  +     +G W           +       + ++  ++D+SA+   D+     +   
Sbjct: 31  SEGMVATLSLSGEWTVASGGLNTRPINAF---PVGTERLLIDVSALQRWDSALISFLWSL 87

Query: 62  MEKYHG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            ++ +     +    +      L +L+               +            IG   
Sbjct: 88  EQRCNTSGITLDNSTLPHSARGLLALLPEHPHPSAPAPAKHFAP--------VQAIGAST 139

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +  + +  +   +    +   G      +  +     L+R +   G S + +V +++F+ 
Sbjct: 140 LSMLTECGTVTELGVETLRGAGATLFGGHGMR--WRDLLRDISDAGPSALLIVGIVNFLM 197

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G+++A  GA QL +F A+I+  +L+ +  +RE+  ++TA+++AGR+G A  A I +M  N
Sbjct: 198 GSILAFVGAVQLRKFAADIYVANLVGLASVREMSAVMTAIIMAGRTGGAYAARIATMTGN 257

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+R  G+   R L+ P I AL++++P+L + A   +++G  IV     D+  A F+
Sbjct: 258 EEIDALRVFGIPVSRYLLLPSIAALVLTMPILYLYACLISLVGGYIVSQGMLDVTMAGFW 317

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +    +  +     G +K    A  IG+V+ + G   G  +  +G   T  VV  I  VI
Sbjct: 318 NHLFGSVHIDQFVFGFVKTITFAMLIGLVSCRIGLKAGRSAADVGVAATRAVVSGIVGVI 377

Query: 359 IIDSLFAIFYFAIGI 373
            +DS+FA+    IGI
Sbjct: 378 ALDSMFAVLATIIGI 392


>gi|91225579|ref|ZP_01260653.1| putative ABC superfamily transport protein [Vibrio alginolyticus
           12G01]
 gi|269967998|ref|ZP_06182036.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|91189699|gb|EAS75973.1| putative ABC superfamily transport protein [Vibrio alginolyticus
           12G01]
 gi|269827355|gb|EEZ81651.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 263

 Score =  233 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 74/268 (27%), Positives = 134/268 (50%), Gaps = 8/268 (2%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
            ++F +    +G++ +           +L       G   +     + F L L++Q+Y V
Sbjct: 2   VDNFIHFVASLGRRTLSICGAFGRATFML------IGALFSKPQPIRSFPL-LVKQLYSV 54

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           GV  + ++++     G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR
Sbjct: 55  GVQSLAIIVVSGLFIGMVLSLQGYVVLVDYGAEGSLGQMVALSLLRELGPVVTALLFAGR 114

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           +GSA+ AEIG MK  E++ ++  M +D ++ +I+PR WA +IS+PLL ++     I GA 
Sbjct: 115 AGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGAQ 174

Query: 284 IVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
           +V   +  +    F+S   S+  L  +I   +IK    A  +  VA+  G+     S  +
Sbjct: 175 LVGVDWKGVDHGSFWSAMQSSVELGQDIGNSMIKCFAFAITVTWVALFNGYDAIPTSEGI 234

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            +  T  VV S   V+ +D +     F 
Sbjct: 235 SRATTRTVVHSSLAVLGLDFVLTALMFG 262


>gi|331011542|gb|EGH91598.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 265

 Score =  233 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 66/255 (25%), Positives = 132/255 (51%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           ++      +     +LG                      L+RQ+Y VGV  + ++++   
Sbjct: 9   RVRLLGRSAIDIVTVLGRSGLFLVNALLGRGGGGSSFQLLVRQLYSVGVMSLVIIVVSGM 68

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+MK
Sbjct: 69  FIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNMK 128

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  +G+D ++ +++PR+WA  IS+P+L ++ +   I GAS V   +  +    
Sbjct: 129 STEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFSVVGIWGASWVAIDWLGVYDGS 188

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++ +   ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV +  
Sbjct: 189 FWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCEPTSEGISRATTRTVVYASL 248

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 249 AVLGLDFILTALMFG 263


>gi|163803754|ref|ZP_02197611.1| putative ABC superfamily transport protein [Vibrio sp. AND4]
 gi|159172438|gb|EDP57307.1| putative ABC superfamily transport protein [Vibrio sp. AND4]
          Length = 263

 Score =  233 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 74/268 (27%), Positives = 130/268 (48%), Gaps = 8/268 (2%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
            +S       +G++ +           +L       G         K  L  LI+Q+Y V
Sbjct: 2   VDSVIQFVASLGRRTLDICEAFGRATLML------IGALVTRPQPIKN-LPFLIKQLYSV 54

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           GV  + ++I+     G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR
Sbjct: 55  GVQSLAIIIVSGLFIGMVLSLQGYIVLVDYGAEGSLGQMVALSLLRELGPVVTALLFAGR 114

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           +GSA+ AEIG MK  E++ ++  M +D ++ +I+PR WA  IS+PLL ++     I GA 
Sbjct: 115 AGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGAISMPLLAMIFMAVGIWGAQ 174

Query: 284 IVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
           +V   +  + +  F++   S+  L  +I   +IK    A  +  +A+  G+     S  +
Sbjct: 175 LVGVDWKGVDYGSFWAAMQSSVELGQDIGNSMIKCIVFAITVTWIALFNGYDAIPTSEGI 234

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            +  T  VV S   V+ +D +     F 
Sbjct: 235 SRATTRTVVHSSLAVLGLDFVLTALMFG 262


>gi|15602040|ref|NP_245112.1| hypothetical protein PM0175 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12720395|gb|AAK02259.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 261

 Score =  233 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 71/254 (27%), Positives = 128/254 (50%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I +  + + S    +G              +++     LI+Q++ +GV  + +++L    
Sbjct: 5   ISELGHHAISSCRAIGRAGFMLFGALIGKPQWRKHTPLLIKQLHVLGVQSLLIIMLSGLF 64

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 65  IGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 124

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +I+PR WA +I++P+L I+     I G S+V   +  +    F
Sbjct: 125 TEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPILAIIFTAIGIWGGSLVGVDWKGVDAGSF 184

Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   +  T   ++  G IK+   A A+  +A+  G+     S  + K  T  VV +  +
Sbjct: 185 WSVMQNAVTWEKDLLNGFIKSLCFAIAVVWIALFNGYDCIPTSEGISKATTRTVVHASLV 244

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 245 VLGLDFVLTALMFG 258


>gi|116789794|gb|ABK25388.1| unknown [Picea sitchensis]
          Length = 462

 Score =  233 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 115/232 (49%)

Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198
            G+  A  +K K    + ++Q+  VG     V +L +   G     Q   + ++ G    
Sbjct: 220 AGQVIARVFKGKIHTRNTLQQLEVVGPGSSGVCLLTAAFVGMAFTIQFVREFTRLGLTRS 279

Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258
              ++++   RE+  ++T+++IAGR GSA  AE+G+M+++E+ D +R +G D V  LI P
Sbjct: 280 VGGVLALAFSRELSPVVTSIIIAGRVGSAFAAELGTMQVSEQTDTLRVLGTDPVDYLIIP 339

Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318
           R+ A  ++LP+LT++    ++  + ++    Y++   +       +    +I + ++K+ 
Sbjct: 340 RVIACCLALPILTLICFSVSLAASVLLADGVYNVSANIILESARRSLHPWDIISAMVKST 399

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                I +++   G      +  +G+  T+ VV S+  + I D + +  +F 
Sbjct: 400 VFGGLISVISCAWGVTTLGGAKGVGESTTSAVVISLVCIFIADFILSWCFFQ 451


>gi|22298988|ref|NP_682235.1| hypothetical protein tlr1445 [Thermosynechococcus elongatus BP-1]
 gi|22295170|dbj|BAC08997.1| ycf63 [Thermosynechococcus elongatus BP-1]
          Length = 267

 Score =  233 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 71/251 (28%), Positives = 122/251 (48%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           +    +      LG  +   G+      + +  L +LI QM  VG + + V ++ +   G
Sbjct: 8   RLRWRASQGVQRLGTALLLGGQVIYRVLRGRIALRNLIEQMALVGPASLSVALITAAFVG 67

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V   Q A +   FGA      +++I   RE+G +LTAV++AGR GSA  AEIG+MK+ E
Sbjct: 68  MVFTIQVAREFIAFGATSAVGGVLAIALARELGPVLTAVVLAGRVGSAFAAEIGTMKVTE 127

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +IDA+  +G + V  L+ PR  A ++ LP+L ILA  + + G  I+    Y IP  V+  
Sbjct: 128 QIDALYMLGTNPVDYLVVPRFIACVVMLPILNILALVTGLWGGLIIGDYLYGIPPGVYIE 187

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
              +     ++++ +IK+      + I+    G      +  +G+  T  VV S+  + I
Sbjct: 188 SIQNFLQTWDLWSSIIKSGIFGGVVAIIGCSWGITTTGGAKGVGQSTTAAVVISLLAIFI 247

Query: 360 IDSLFAIFYFA 370
           ++   +   F 
Sbjct: 248 LNFFLSWALFG 258


>gi|4336799|gb|AAD17958.1| toluene tolerance protein Ttg2B [Pseudomonas putida]
          Length = 265

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +++      +     +LG                 G    L +Q+Y VGV  + ++++  
Sbjct: 8   ERVRLLGRSAIDVLAVLGRSCLFLFHALIGRGGIGGGFQLLTKQLYSVGVLSLAIIVVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+M
Sbjct: 68  VFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +++PR+WA  ISLPLL ++ +   I G S V   +  +   
Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 187

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F++   ++ +   ++  GLIK+   A     +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SFWANMQNSVSFTDDVLNGLIKSLVFAFVTTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|284008692|emb|CBA75353.1| conserved hypothetical protein [Arsenophonus nasoniae]
          Length = 261

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 71/254 (27%), Positives = 121/254 (47%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +      S +     G              +F      LI+Q+Y VG+  + ++ +    
Sbjct: 7   LTALGRRSLAVVATFGRAGYLLFRALFGKPEFAKQWPLLIKQLYNVGILSLLIIAVSGLF 66

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L+ F AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 67  IGMVLGLQGYLVLTMFSAESSLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 126

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+I ++  M +D +R +I+PR WA +IS+PLL ++     I+G ++V   +  I    F
Sbjct: 127 TEQISSLEMMAVDPLRRVIAPRFWAGLISMPLLALIFVAVGILGGALVGVDWKGIDEGFF 186

Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   S      +I    IK+   A  +  +A+  G+     S  + +  T  VV S   
Sbjct: 187 WSSMQSAIEWKKDILNCFIKSVVFAFTVSWIALFNGYDAIPTSEGISRATTRTVVHSSLA 246

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 247 VLGLDFVLTALMFG 260


>gi|293394224|ref|ZP_06638524.1| toluene tolerance ABC superfamily ATP binding cassette transporter,
           membrane protein [Serratia odorifera DSM 4582]
 gi|291423202|gb|EFE96431.1| toluene tolerance ABC superfamily ATP binding cassette transporter,
           membrane protein [Serratia odorifera DSM 4582]
          Length = 260

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +  F     + +   G              + +     L++Q++ VGV  + ++++  
Sbjct: 4   QALASFGRRGINTSAAFGRAGLMLWGALVGRPEPRRQWPLLVKQLHSVGVQSLLIIMVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R + +PR WA +IS+PLLTI+     I G S+V   +  I   
Sbjct: 124 KATEQISSLEMMAVDPLRRIAAPRFWAGLISMPLLTIIFVAVGIWGGSVVGVDWKGIDSG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S          ++   LIK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQGAVEWRQDLLNCLIKSVVFAITVTWIAIFNGYDAVPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|253997969|ref|YP_003050032.1| hypothetical protein Msip34_0256 [Methylovorus sp. SIP3-4]
 gi|253984648|gb|ACT49505.1| protein of unknown function DUF140 [Methylovorus sp. SIP3-4]
          Length = 263

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 70/266 (26%), Positives = 134/266 (50%), Gaps = 8/266 (3%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
            N    +   +G +I+  +    S A      +  +GE     +         IR++Y+ 
Sbjct: 2   LNRLAEVLRGMGHRIIDRVWRLGSGARFFVYTLIYSGESFRRIH-------LTIREIYFT 54

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           GV  + ++++ +F  G V+A QG   L ++G+      L+++  +RE+G ++TA++ AGR
Sbjct: 55  GVMSLLIILVSAFFVGMVLALQGYNTLQKYGSSEAIGVLVALSLVRELGPVVTALLFAGR 114

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           +G+AI AEIG MK  E++ A+  M +  +  +++PR WA ++S+PLL  L +   ++G  
Sbjct: 115 AGTAITAEIGLMKTTEQLSAMEMMAVSPIARVVAPRFWAGVVSMPLLAALFSMVGVLGGY 174

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
           +V      +    F+S+  ++     +I  G+IK+     A  ++A+ EGF     +  +
Sbjct: 175 LVAVPVIGVDNGAFWSQMQASVDFQADIVNGVIKSVVFGVACTMIALFEGFDAPPTAEGV 234

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFY 368
            +  T  VV S   V+ +D +   F 
Sbjct: 235 SRATTRTVVNSSLAVLGLDFILTSFM 260


>gi|119776212|ref|YP_928952.1| hypothetical protein Sama_3080 [Shewanella amazonensis SB2B]
 gi|119768712|gb|ABM01283.1| putative membrane protein [Shewanella amazonensis SB2B]
          Length = 260

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 76/255 (29%), Positives = 130/255 (50%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            + +    + +Q   +G           S  K +     L++Q+Y VGV  + ++++   
Sbjct: 6   AVARLGRGAINQVAGMGRAGVMLWGAIFSVPKPQKGFPLLVKQLYVVGVQSLIIILVSGL 65

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L  FG E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 66  FIGMVLALQGYTILVDFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 125

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +I+PR WA +IS+PLL ++     I G  IV  ++  I    
Sbjct: 126 STEQLSSLEMMAVDPLRQIIAPRFWAGVISMPLLALMFTAVGIWGGHIVGVEWKGIDNGA 185

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++     +I   LIK+   A  +  +A+  G+ V  +   + K  T+ VVQS  
Sbjct: 186 FWSILQASVEWRQDIVNCLIKSLVFAVVVTWIALYRGYEVVPNPEGISKATTSTVVQSSL 245

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D L     F 
Sbjct: 246 AVLALDFLLTALMFG 260


>gi|283853085|ref|ZP_06370341.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B]
 gi|283571552|gb|EFC19556.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B]
          Length = 274

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 79/273 (28%), Positives = 134/273 (49%), Gaps = 5/273 (1%)

Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY 161
              N+       +   I        S    LG +    G+              +++Q+Y
Sbjct: 2   PRPNTMTQALALLLSPIAALGRAVLSLVAELGGLCIFMGKGLWRIVFPSPAWRKIVQQVY 61

Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221
           ++GV  V V++LI   TG V+  QG + L +FG+E      +++  +RE+G +LTA+MI 
Sbjct: 62  FIGVKSVFVIVLIGLFTGMVLGLQGYYTLVKFGSEGLLGAAVALSIIRELGPVLTAIMIT 121

Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281
           GR+GS++ AEIG M+I+E+IDA+ TMG++ +R LI+PR+ A ++  PLLT + +   I G
Sbjct: 122 GRAGSSMAAEIGIMRISEQIDALSTMGINPLRFLIAPRLAASLVCFPLLTAIFDVVGIGG 181

Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----G 336
             +       I   V+F R  ST  L ++  G +K+   A  +  +   EG+       G
Sbjct: 182 GYLTGVVLLGINPGVYFDRIDSTVELGDVTGGFVKSLVFALLVAAICCFEGYFTHTRREG 241

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
             +  +    T+ VV S   +++ D +   F  
Sbjct: 242 FGAKGVSLATTSAVVLSCITILVADYVLTSFLL 274


>gi|195952743|ref|YP_002121033.1| protein of unknown function DUF140 [Hydrogenobaculum sp. Y04AAS1]
 gi|195932355|gb|ACG57055.1| protein of unknown function DUF140 [Hydrogenobaculum sp. Y04AAS1]
          Length = 246

 Score =  233 bits (595), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 71/243 (29%), Positives = 123/243 (50%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                + LG             +K +  +   + ++ Y+G   VPVV+  S  TG V+A 
Sbjct: 1   MVEFINALGEAFYIFLTALLHIFKDRPKIRHFVDRVIYIGADTVPVVVTTSLFTGGVLAL 60

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q    L +F +E     L+++   RE+G +LT++M+  R GSAI A IG+MK+ E+IDA+
Sbjct: 61  QTYSTLHKFNSEYLIGALVALSMGRELGPVLTSLMVVARVGSAITASIGTMKVTEQIDAL 120

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            T+ ++    + SP ++A ++ LPLLTIL++ S IIG  +V    + +   +++ +    
Sbjct: 121 ETLAINPYAYITSPILFACMVDLPLLTILSDISGIIGGYLVSTIIFHVNGHMYWDKTKEI 180

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               +I+ GL KA      I  V+   GF     +  +G+  T+ VV S  +++I+D   
Sbjct: 181 VDFYDIYGGLYKAFVYGIVIATVSNYFGFKTSGGNQGVGRATTSSVVISSMLILILDYFL 240

Query: 365 AIF 367
              
Sbjct: 241 TAI 243


>gi|240948315|ref|ZP_04752701.1| permease [Actinobacillus minor NM305]
 gi|240297354|gb|EER47895.1| permease [Actinobacillus minor NM305]
          Length = 258

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 77/264 (29%), Positives = 133/264 (50%), Gaps = 7/264 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N    IGK  +  I      A +L       G       +F+     LI+Q+Y VGV 
Sbjct: 1   MINFINQIGKTTIDIIRAFGRSAFMLW------GALIGKP-QFRKHSPLLIKQLYVVGVQ 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + +++L     G V+  QG   L  F AE     L+S+  LRE+G ++TA++ AGR+GS
Sbjct: 54  SLLIIMLSGLFIGMVLGLQGYVVLVDFAAETSLGTLVSLSLLRELGPVVTALLFAGRAGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+P+L ++     I G S+V 
Sbjct: 114 ALTAEIGLMKATEQLSSLEMMAVDPLRRIIAPRFWAGVISMPILAVIFTAIGIWGGSLVG 173

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
             +  +    F+S   ++ + +++  G IK+   A A+  +A+  G+     S  + +  
Sbjct: 174 VDWKGVDSGSFWSVMQNSVSASDLINGFIKSIIFAFAVVWIALFNGYDSTATSEGISQAT 233

Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370
           T  VV +  +++ +D +     F 
Sbjct: 234 TKTVVNASLVILGLDFILTAIMFG 257


>gi|163783076|ref|ZP_02178071.1| hypothetical protein HG1285_00835 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881756|gb|EDP75265.1| hypothetical protein HG1285_00835 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 248

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 69/236 (29%), Positives = 117/236 (49%), Gaps = 4/236 (1%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
           L +           K + F    I Q  Y+      VV++ S  TG VIA Q      +F
Sbjct: 17  LALQAVYFLFKKPPKVRHF----IDQFTYIAAETSLVVLVTSTFTGGVIALQTYSTFHRF 72

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
            AE     ++++   RE+G +LT++M+  R GSA+ A IG+M+I ++IDA+  M ++ VR
Sbjct: 73  NAEYLIGAVVALSMGRELGPVLTSLMVVARVGSAMTANIGTMRITQQIDALEVMAVNPVR 132

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            L++PRI+A  + +PLLTI++N + + G  +V  K + +   +++ +        +I  G
Sbjct: 133 YLVTPRIFATTVGVPLLTIVSNVAGMFGGWLVATKLFKVNEYLYWQKMIDLTEFYDIVGG 192

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           L KA      I  V+   GF     +  +G+  T  VV +  +++I D       F
Sbjct: 193 LYKAFVFGFIIAAVSCYFGFYTRGGTEGVGRSTTNSVVTASMLILITDYFLTAIIF 248


>gi|116619717|ref|YP_821873.1| hypothetical protein Acid_0582 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116222879|gb|ABJ81588.1| protein of unknown function DUF140 [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 265

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 74/239 (30%), Positives = 132/239 (55%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
                 G+   + ++   +   +I QM  +GV  +P+V+L  F +GAV+A Q +  L+Q+
Sbjct: 25  EFFVLAGKAFQNIFRRPHYGDDIILQMDTIGVGSLPIVVLTGFFSGAVMALQMSRALAQY 84

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           G    +  ++S+   RE+G +LTA+M+AGR+ S I +E+GSMK+ E+IDA+R +G D V+
Sbjct: 85  GQVGKTGTVVSVTLARELGPVLTALMVAGRNASGIASELGSMKVTEQIDAMRALGTDPVQ 144

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            L++PR+ A  + LPLLTI+A+F  + G  I+   + ++P   +++         ++  G
Sbjct: 145 KLVTPRLIATGVMLPLLTIIADFVGMFGGFIIAKFFLNLPPRQYWTSVWRALEWNDVTQG 204

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           L+K    A  I +V    G      +  +G+  T  VV +  +V ++D L    + + G
Sbjct: 205 LLKPLIFAIVISLVGCFYGLRTTGGTQGVGRSTTQAVVLATVLVFVLDLLITKIFVSQG 263


>gi|209694101|ref|YP_002262029.1| toluene tolerance protein Ttg2B [Aliivibrio salmonicida LFI1238]
 gi|208008052|emb|CAQ78191.1| toluene tolerance protein Ttg2B [Aliivibrio salmonicida LFI1238]
          Length = 264

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 81/266 (30%), Positives = 132/266 (49%), Gaps = 8/266 (3%)

Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
           S      +IGK+ +           +L       G   A     + F L L++Q+Y VGV
Sbjct: 5   SLILFVENIGKRALSTCEAIGRATFML------FGAIIAKPQPVRMFPL-LLQQLYSVGV 57

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             + ++++     G VI+ QG   L  +GAE     L+S+  LRE+G ++TA++ AGR+G
Sbjct: 58  LSLVIIVVSGLFIGMVISLQGYVILVDYGAETSLGQLVSLSLLRELGPVVTALLFAGRAG 117

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           SA+ AEIG MK  E++ ++  M +D +R +I+PR+WA +IS+PLL ++     I G  IV
Sbjct: 118 SALTAEIGLMKTTEQLSSMEMMAIDPLRRIIAPRLWAGVISMPLLAMIFMAVGIWGGQIV 177

Query: 286 IWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
             ++  I    F+S   ++  +  +I   LIK    A  +  +A+  G+     S  +  
Sbjct: 178 GVEWKGIDHGSFWSVMQASVDVRHDIVNSLIKCVVFAFVVTWIALFNGYDATPTSEGISL 237

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370
             T  VV S   V+ ID +     F 
Sbjct: 238 ATTRTVVHSSLAVLGIDFVLTALMFG 263


>gi|70728304|ref|YP_258053.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas
           fluorescens Pf-5]
 gi|68342603|gb|AAY90209.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas
           fluorescens Pf-5]
          Length = 265

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 68/256 (26%), Positives = 133/256 (51%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +++  F         +LG                 G    L++Q++ VGV  + ++++  
Sbjct: 8   ERVRLFGRSGIDVLAVLGRSTLFLFHALLGRGGIGGSFGLLVKQLHSVGVMSLVIIVVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   LS +G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+M
Sbjct: 68  IFIGMVLALQGFNILSSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +I+PR+WA  ISLPLL ++ +   I G S V   +  +   
Sbjct: 128 KSTEQLSSLEMIGVDPLKYIIAPRLWAGFISLPLLAMIFSVVGIWGGSWVAVDWLGVYDG 187

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            +++   ++ T + ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SYWANMQNSVTFSGDVLNGVIKSIVFAFVVTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|126657935|ref|ZP_01729088.1| hypothetical protein CY0110_13761 [Cyanothece sp. CCY0110]
 gi|126620875|gb|EAZ91591.1| hypothetical protein CY0110_13761 [Cyanothece sp. CCY0110]
          Length = 263

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 68/248 (27%), Positives = 116/248 (46%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                    L   I   G+      K K    + + QM  VG   + + ++ +   G V 
Sbjct: 9   RGLGIWFERLVAAILLGGQVFFHLLKTKIHRRNTLEQMSVVGPESLTIALITAGFVGMVF 68

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
             Q A +   FGA      ++++   RE+  +LTAV++AGR GSA  AEIG+M++ E+ID
Sbjct: 69  TIQVAREFISFGAASTVGGVLALALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQID 128

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +  D +  L+ PR+ A  + LP+L IL+  + + G  ++    YDI   VF +   
Sbjct: 129 ALYMLKTDPIDYLVLPRVLACCLMLPVLNILSLLTGMTGGLLIANGLYDISPYVFLTSIR 188

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           +   L ++ T +IK+      I ++    G      +  +G+  TT VV S+  V +I+ 
Sbjct: 189 NFLELWDLVTSVIKSIAFGGLIAVIGCSWGLTTTGGAKGVGQSTTTAVVTSLLAVFVINF 248

Query: 363 LFAIFYFA 370
             +   F 
Sbjct: 249 FLSWVMFQ 256


>gi|254229285|ref|ZP_04922703.1| conserved hypothetical protein [Vibrio sp. Ex25]
 gi|262393183|ref|YP_003285037.1| ABC transporter permease component YrbE [Vibrio sp. Ex25]
 gi|151938209|gb|EDN57049.1| conserved hypothetical protein [Vibrio sp. Ex25]
 gi|262336777|gb|ACY50572.1| uncharacterized ABC transporter permease component YrbE [Vibrio sp.
           Ex25]
          Length = 263

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 75/268 (27%), Positives = 132/268 (49%), Gaps = 8/268 (2%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
            ++F +    +G++ +           +L       G         K F L L++Q+Y V
Sbjct: 2   VDNFMHFVASLGRRTLSICGAFGRATFML------IGALFTKPQPLKSFPL-LVKQLYSV 54

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           GV  + ++++     G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR
Sbjct: 55  GVQSLAIIVVSGLFIGMVLSLQGYVVLVDYGAEGSLGQMVALSLLRELGPVVTALLFAGR 114

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           +GSA+ AEIG MK  E++ ++  M +D ++ +I+PR WA  IS+PLL ++     I GA 
Sbjct: 115 AGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGAISMPLLAMIFMAVGIWGAQ 174

Query: 284 IVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
           +V   +  +    F+S   S+  L  +I   +IK    A  +  VA+  G+     S  +
Sbjct: 175 LVGVDWKGVDHGSFWSAMQSSVELGQDIGNSMIKCFAFAITVTWVALFNGYDAIPTSEGI 234

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            +  T  VV S   V+ +D +     F 
Sbjct: 235 SRATTRTVVHSSLAVLGLDFVLTALMFG 262


>gi|89075259|ref|ZP_01161686.1| hypothetical protein SKA34_22619 [Photobacterium sp. SKA34]
 gi|89048940|gb|EAR54508.1| hypothetical protein SKA34_22619 [Photobacterium sp. SKA34]
          Length = 260

 Score =  233 bits (594), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 74/255 (29%), Positives = 129/255 (50%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I         +   +G           S  + +     LI+Q+Y VGV  + ++I+   
Sbjct: 5   AIAHLGRSGIEKCQTMGRATLMLFGALVSKPQPRKMFPLLIKQLYSVGVLSIAIIIVSGL 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V++ QG   L+ FGAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 65  FIGMVLSLQGYLVLAGFGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +I+PR WA +IS+PLL ++ +   + GA +V   +  I +  
Sbjct: 125 ATEQLSSMEMMAVDPLRRVIAPRFWAGVISMPLLALMFSVVGLWGAQVVGVDWKGIDYGS 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   S+   + +I   +IKA   A  +  +A+  G+     S  + +  T  VV S  
Sbjct: 185 FWSVMQSSVNFSYDIGNSIIKAVAFAITVTWIAVFNGYDAVPTSEGISRATTRTVVNSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFILTALMFG 259


>gi|71736723|ref|YP_276266.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|257483485|ref|ZP_05637526.1| toluene tolerance proteinTtg2B, putative [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|289627577|ref|ZP_06460531.1| putative ABC transport system permease protein [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289647003|ref|ZP_06478346.1| putative ABC transport system permease protein [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|71557276|gb|AAZ36487.1| toluene tolerance proteinTtg2B, putative [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|330869989|gb|EGH04698.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. aesculi
           str. 0893_23]
 gi|330987098|gb|EGH85201.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 265

 Score =  233 bits (594), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 69/267 (25%), Positives = 138/267 (51%), Gaps = 8/267 (2%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
            S  +    +G+  +  +         L   +   G   +S          L+RQ+Y VG
Sbjct: 4   KSLMDRVRLLGRSAIDIVTVLGRSGLFLVNALLGRGGAGSS-------FQLLVRQLYSVG 56

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
           V  + ++++     G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+
Sbjct: 57  VMSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRA 116

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  IS+P+L ++ +   I GAS 
Sbjct: 117 GSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFSVVGIWGASW 176

Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           V   +  +    F+S   ++ +   ++  G+IK+   A  +  +A+ +G+     S  + 
Sbjct: 177 VAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCEPTSEGIS 236

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  T  VV +   V+ +D +     F 
Sbjct: 237 RATTRTVVYASLAVLGLDFILTALMFG 263


>gi|218710669|ref|YP_002418290.1| ABC transport protein: transmembrane protein (IM) [Vibrio
           splendidus LGP32]
 gi|218323688|emb|CAV20020.1| ABC transport protein: transmembrane protein (IM) [Vibrio
           splendidus LGP32]
          Length = 261

 Score =  233 bits (594), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 77/258 (29%), Positives = 128/258 (49%), Gaps = 2/258 (0%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           I K I      + +     G              K K F L L++Q Y VGV  + ++++
Sbjct: 4   IAKTIAGVGKRALAICESFGRASLMLFGALFGIPKLKNFPL-LVKQFYSVGVQSLAIILV 62

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
                G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG
Sbjct: 63  SGLFIGMVLSLQGYVVLIDYGAEGNLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIG 122

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
            MK  E+I ++  M +D ++ +I+PR+WA +IS+PLL ++     I GA +V   +  I 
Sbjct: 123 LMKATEQISSLEMMAVDPLKRIIAPRLWAGLISMPLLAMIFMAVGIWGAQLVGVDWKGID 182

Query: 294 FAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
              F+S   S+  L  +I   +IK    A  +  +A+  G+     S  + +  T  VV 
Sbjct: 183 HGSFWSAMQSSVELGRDIGNSMIKCMVFAITVTWIALFNGYDAVPTSEGISQATTRTVVH 242

Query: 353 SISIVIIIDSLFAIFYFA 370
           S   V+ +D +     F 
Sbjct: 243 SSLAVLGLDFVLTALMFG 260


>gi|332172346|gb|AEE21600.1| protein of unknown function DUF140 [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 259

 Score =  233 bits (594), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 76/264 (28%), Positives = 133/264 (50%), Gaps = 8/264 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
                IG+  +  +        +L       G   A     K   L+ I+Q+Y VGV  +
Sbjct: 2   QWLASIGRNTIDTVGAFGRAFLML------LGAVIAKPQLIKNTPLT-IKQIYVVGVQSL 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++++     G V+A QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+
Sbjct: 55  LIIVVSGLFIGMVMALQGYTILVGYGAEGSLGPMVALSLLRELGPVVTALLFAGRAGSAL 114

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG MK  E++ ++  M +D +R +++PR+WA IIS+P+L I+ +   I+G  +V   
Sbjct: 115 TAEIGLMKATEQLSSLEMMAVDPLRRIVAPRLWAGIISMPMLAIIFSAVGILGGHVVGVD 174

Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +    ++S   S+     ++  G+IK    A  I  +A+ +G+     S  + K  T
Sbjct: 175 WLGVDAGSYWSIMQSSVDWNEDVVNGIIKTFVFAFVITWIAIFKGYDAIPTSEGISKATT 234

Query: 348 TCVVQSISIVIIIDSLFAIFYFAI 371
             VV S   V+ +D +     F I
Sbjct: 235 ETVVFSSLAVLGLDFILTALMFGI 258


>gi|315633782|ref|ZP_07889072.1| toluene efflux ABC superfamily ATP binding cassette transporter,
           membrane protein [Aggregatibacter segnis ATCC 33393]
 gi|315477824|gb|EFU68566.1| toluene efflux ABC superfamily ATP binding cassette transporter,
           membrane protein [Aggregatibacter segnis ATCC 33393]
          Length = 261

 Score =  232 bits (593), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 74/251 (29%), Positives = 128/251 (50%), Gaps = 1/251 (0%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           F   + +    LG              + +      I+Q++ +GV  + +++L     G 
Sbjct: 9   FGRHAINFGRALGRAGFLLFGALIGKPQVRKHFPLFIKQLHVLGVQSLLIIMLSGLFIGM 68

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG MK  E+
Sbjct: 69  VLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQ 128

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           + ++  M +D +R +I+PR WA II++P+L+I+     I G S+V   +  +    F+S 
Sbjct: 129 LSSLEMMAVDPLRRVIAPRFWAGIIAMPILSIIFIAIGIWGGSLVGVDWKGVDAGSFWSV 188

Query: 301 FHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
             S+ T + +I  G IK+ F A A+  +A+  G+     S  + K  T  VV +  +V+ 
Sbjct: 189 MQSSVTWSHDILNGTIKSVFFAIAVVWIALFNGYDCIPTSEGISKATTRTVVHASLVVLG 248

Query: 360 IDSLFAIFYFA 370
           +D +     F 
Sbjct: 249 LDFVLTAIMFG 259


>gi|254509100|ref|ZP_05121202.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Vibrio parahaemolyticus
           16]
 gi|219547981|gb|EED25004.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Vibrio parahaemolyticus
           16]
          Length = 263

 Score =  232 bits (593), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 75/262 (28%), Positives = 129/262 (49%), Gaps = 1/262 (0%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +  H+   +      + S     G          AS  +    L  LI+Q+Y VGV  + 
Sbjct: 1   MMAHLTDFVASTGRRALSVIASFGRASLMLFGALASRPQPIANLPLLIKQLYSVGVQSLL 60

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +++L     G V++ QG   L  FGAE     ++++  LRE+G ++TA++ AGR+GSA+ 
Sbjct: 61  IIVLSGLFIGMVLSLQGYVILIDFGAEGALGQMVALSLLRELGPVVTALLFAGRAGSALT 120

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ ++  M +D ++ +I+PR WA +IS+PLL ++     I G  +V   +
Sbjct: 121 AEIGLMKATEQLSSMEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDW 180

Query: 290 YDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             I    F++   S+  L  +I   +IK+   A  +  +A+  G+     S  + +  T 
Sbjct: 181 KGIDHGSFWAAMQSSVELGQDIGNSMIKSLAFAITVTWIALFNGYDAIPTSEGISRATTR 240

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV S   V+ +D +     F 
Sbjct: 241 TVVHSSLAVLGLDFVLTALMFG 262


>gi|77457091|ref|YP_346596.1| hypothetical protein Pfl01_0864 [Pseudomonas fluorescens Pf0-1]
 gi|77381094|gb|ABA72607.1| putative ABC transport system, membrane protein [Pseudomonas
           fluorescens Pf0-1]
          Length = 265

 Score =  232 bits (593), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 66/256 (25%), Positives = 132/256 (51%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +++ +F         + G                 G    L++Q++ VGV  + ++++  
Sbjct: 8   ERVRRFGLAGIDSVAVFGRSTLFLFHALLGRGGIGGGFGLLVKQLHSVGVMSLVIIVVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   LS +G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+M
Sbjct: 68  IFIGMVLALQGFNILSSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +I+PR+WA  ISLP+L ++ +   I G S V   +  +   
Sbjct: 128 KSTEQLSSLEMIGVDPLKYIIAPRLWAGFISLPVLAMIFSVVGIWGGSWVAVDWLGVYEG 187

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            ++S   ++ +   ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SYWSNMQNSVSFGDDVLNGIIKSAVFAFVVTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|320330045|gb|EFW86032.1| putative ABC transport system permease protein [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 265

 Score =  232 bits (593), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 69/267 (25%), Positives = 138/267 (51%), Gaps = 8/267 (2%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
            S  +    +G+  +  +         L   +   G   +S          L+RQ+Y VG
Sbjct: 4   KSLMDRVRLLGRSAIDIVTVLGRSGLFLVNALLGRGGAGSS-------FQLLVRQLYSVG 56

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
           V  + ++++     G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+
Sbjct: 57  VMSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRA 116

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  IS+P+L ++ +   I GAS 
Sbjct: 117 GSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFSVVGIWGASW 176

Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           V   +  +    F+S   ++ +   ++  G+IK+   A  +  +A+ +G+     S  + 
Sbjct: 177 VAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCEPTSEGIS 236

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  T  VV +   V+ +D +     F 
Sbjct: 237 RATTRTVVYASLAVLGLDFILTALMFG 263


>gi|114564530|ref|YP_752044.1| hypothetical protein Sfri_3369 [Shewanella frigidimarina NCIMB 400]
 gi|114335823|gb|ABI73205.1| protein of unknown function DUF140 [Shewanella frigidimarina NCIMB
           400]
          Length = 261

 Score =  232 bits (593), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 69/239 (28%), Positives = 124/239 (51%), Gaps = 1/239 (0%)

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G              + K     LI+Q+Y +GV  + ++++     G V+A QG   L +
Sbjct: 22  GRAGIMLWRAIVHVPRIKKGTPLLIKQVYVLGVRSMVIILVSGLFIGMVLALQGYNILVE 81

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
           FG E     ++++  LRE+G ++ A++ AGR+GSA+ AEIG MK  E++ ++  M +D +
Sbjct: 82  FGTEESLGPMVALSLLRELGPVVAALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAIDPL 141

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIF 311
           R +I+PR WA +IS+PLL ++ +   I+G  +V  ++  I    F+S   ++     +I 
Sbjct: 142 RQIIAPRFWAGVISMPLLALMFSLVGILGGHLVGVEWKGIDSGAFWSILRASVEWREDIV 201

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             LIK+      +  +A+  G+ V  +   + +  T+ VVQ+   V+ +D L     F 
Sbjct: 202 NCLIKSVIFGVVVTWIALYRGYEVQPNPEGISRATTSTVVQASLAVLALDFLLTAIMFG 260


>gi|257465526|ref|ZP_05629897.1| permease [Actinobacillus minor 202]
 gi|257451186|gb|EEV25229.1| permease [Actinobacillus minor 202]
          Length = 260

 Score =  232 bits (593), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 77/264 (29%), Positives = 133/264 (50%), Gaps = 7/264 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N    IGK  +  I      A +L       G       +F+     LI+Q+Y VGV 
Sbjct: 1   MINFINQIGKTTIDIIRAFGRSAFMLW------GALIGKP-QFRKHSPLLIKQLYVVGVQ 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + +++L     G V+  QG   L  F AE     L+S+  LRE+G ++TA++ AGR+GS
Sbjct: 54  SLLIIMLSGLFIGMVLGLQGYVVLVDFAAETSLGTLVSLSLLRELGPVVTALLFAGRAGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+P+L ++     I G S+V 
Sbjct: 114 ALTAEIGLMKATEQLSSLEMMAVDPLRRIIAPRFWAGVISMPILAVIFTAIGIWGGSLVG 173

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
             +  +    F+S   ++ + +++  G IK+   A A+  +A+  G+     S  + +  
Sbjct: 174 VDWKGVDSGSFWSVMQNSVSASDLINGFIKSIIFAFAVVWIALFNGYDSTATSEGISQAT 233

Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370
           T  VV +  +++ +D +     F 
Sbjct: 234 TKTVVNASLVILGLDFILTAIMFG 257


>gi|66047367|ref|YP_237208.1| hypothetical protein Psyr_4140 [Pseudomonas syringae pv. syringae
           B728a]
 gi|289676091|ref|ZP_06496981.1| putative ABC transport system permease protein [Pseudomonas
           syringae pv. syringae FF5]
 gi|63258074|gb|AAY39170.1| Protein of unknown function DUF140 [Pseudomonas syringae pv.
           syringae B728a]
 gi|330895265|gb|EGH27603.1| hypothetical protein PSYJA_00595 [Pseudomonas syringae pv. japonica
           str. M301072PT]
 gi|330937995|gb|EGH41776.1| hypothetical protein PSYPI_04838 [Pseudomonas syringae pv. pisi
           str. 1704B]
 gi|330969694|gb|EGH69760.1| hypothetical protein PSYAR_04288 [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 265

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 70/267 (26%), Positives = 138/267 (51%), Gaps = 8/267 (2%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
            S  +    +G+  +  +         L   +   G   +S          L+RQ+Y VG
Sbjct: 4   KSLMDRVRLLGRSAIDIVTVLGRSGLFLVHALLGRGGAGSS-------FQLLVRQLYSVG 56

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
           V  + ++++     G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+
Sbjct: 57  VMSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRA 116

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  ISLP+L ++ +   I GAS 
Sbjct: 117 GSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFSVVGIWGASW 176

Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           V   +  +    F+S   ++ +   ++  G+IK+   A  +  +A+ +G+     S  + 
Sbjct: 177 VAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCEPTSEGIS 236

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  T  VV +   V+ +D +     F 
Sbjct: 237 RATTRTVVYASLAVLGLDFILTALMFG 263


>gi|190150611|ref|YP_001969136.1| hypothetical protein APP7_1342 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|189915742|gb|ACE61994.1| hypothetical protein APP7_1342 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
          Length = 276

 Score =  232 bits (592), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 76/264 (28%), Positives = 131/264 (49%), Gaps = 7/264 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N    IG  ++ FI        +L       G       +F+     LI+Q+Y +GV 
Sbjct: 19  VINFISGIGSTVIDFIRAFGRATFML------LGALIGKP-QFRKHTPLLIKQLYVLGVQ 71

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + +++L     G V+  QG   L  F AE     L+S+  LRE+G ++TA++ AGR+GS
Sbjct: 72  SLLIIMLSGLFIGMVLGLQGYVVLVDFAAETSLGTLVSLSLLRELGPVVTALLFAGRAGS 131

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+P+L  +     I G S+V 
Sbjct: 132 ALTAEIGLMKATEQLSSLEMMAVDPLRRIIAPRFWAGVISMPILAAIFTAIGIWGGSLVG 191

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
             +  +    F+S   ++   +++  G IK+   A A+  +A+  G+     S  + +  
Sbjct: 192 VDWKGVDGGSFWSVMQNSVDWSDLINGFIKSIIFAFAVVWIALFNGYDSVATSEGISQAT 251

Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370
           T  VV +  +V+ +D +     F 
Sbjct: 252 TRTVVHASLVVLGLDFILTAIMFG 275


>gi|156975891|ref|YP_001446798.1| hypothetical protein VIBHAR_03657 [Vibrio harveyi ATCC BAA-1116]
 gi|156527485|gb|ABU72571.1| hypothetical protein VIBHAR_03657 [Vibrio harveyi ATCC BAA-1116]
          Length = 263

 Score =  232 bits (592), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 74/268 (27%), Positives = 130/268 (48%), Gaps = 8/268 (2%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
            +SF      +G++ +           +L       G         K  L  LI+Q+Y V
Sbjct: 2   VDSFIQFVASLGRRTLAICEAFGRATLML------VGALVTRPQPIKN-LPLLIKQLYSV 54

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           GV  + ++++     G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR
Sbjct: 55  GVQSLAIIVVSGLFIGMVLSLQGYVVLVDYGAEGSLGQMVALSLLRELGPVVTALLFAGR 114

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           +GSA+ AEIG MK  E++ ++  M +D ++ +I+PR WA  IS+PLL ++     I GA 
Sbjct: 115 AGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGAISMPLLAMIFMAVGIWGAQ 174

Query: 284 IVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
           +V   +  +    F++   S+  L  +I   +IK    A  +  +A+  G+     S  +
Sbjct: 175 LVGVDWKGVDHGSFWAAMQSSVELGQDIGNSMIKCIVFAITVTWIALFNGYDAIPTSEGI 234

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            +  T  VV S   V+ +D +     F 
Sbjct: 235 SRATTRTVVHSSLAVLGLDFVLTALMFG 262


>gi|218248789|ref|YP_002374160.1| hypothetical protein PCC8801_4068 [Cyanothece sp. PCC 8801]
 gi|257061848|ref|YP_003139736.1| hypothetical protein Cyan8802_4107 [Cyanothece sp. PCC 8802]
 gi|218169267|gb|ACK68004.1| protein of unknown function DUF140 [Cyanothece sp. PCC 8801]
 gi|256592014|gb|ACV02901.1| protein of unknown function DUF140 [Cyanothece sp. PCC 8802]
          Length = 263

 Score =  232 bits (592), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 72/255 (28%), Positives = 120/255 (47%), Gaps = 6/255 (2%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           ++ +    +    A +LG      G+      K      + + QM  VG   + + ++ +
Sbjct: 8   RRGIGVWFERLMAAMLLG------GQVFFHLLKTPIHRRNTLEQMSVVGPESLTIALVTA 61

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V   Q A +   FGA      +++I   RE+  +LTAV++AGR GSA  AEIG+M
Sbjct: 62  GFVGMVFTIQVAREFIHFGAASTVGGVLAIALTRELSPVLTAVVVAGRVGSAFAAEIGTM 121

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           ++ E+IDA+  +  D +  L+ PR+ A  + LP+L ILA  + + G  ++    YDI   
Sbjct: 122 RVTEQIDALYVLKTDPIDYLVVPRVLACCMMLPVLNILALMTGMAGGLLIADSLYDISPD 181

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           +F     +   L +I T LIK+      I ++    G      +  +G+  TT VV S+ 
Sbjct: 182 LFLKSARNFLELWDIVTSLIKSAVFGGLIAVIGCSWGLTTTGGAKGVGQSTTTAVVTSLL 241

Query: 356 IVIIIDSLFAIFYFA 370
            V I +   + F F 
Sbjct: 242 AVFIANFFLSWFMFQ 256


>gi|298488498|ref|ZP_07006528.1| permease component of an ABC superfamily transporter [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298156839|gb|EFH97929.1| permease component of an ABC superfamily transporter [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
          Length = 265

 Score =  232 bits (592), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 69/267 (25%), Positives = 138/267 (51%), Gaps = 8/267 (2%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
            S  +    +G+  +  +         L   +   G   +S          L+RQ+Y VG
Sbjct: 4   KSLMDRVRLLGRSAIDIVTVLGRSGLFLVNALLGRGGAGSS-------FQLLVRQLYSVG 56

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
           V  + ++++     G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+
Sbjct: 57  VMSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRA 116

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  IS+P+L ++ +   I GAS 
Sbjct: 117 GSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFSVVGIWGASW 176

Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           V   +  +    F+S   ++ +   ++  G+IK+   A  +  +A+ +G+     S  + 
Sbjct: 177 VAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCDPTSEGIS 236

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  T  VV +   V+ +D +     F 
Sbjct: 237 RATTRTVVYASLAVLGLDFILTALMFG 263


>gi|166363947|ref|YP_001656220.1| hypothetical protein MAE_12060 [Microcystis aeruginosa NIES-843]
 gi|166086320|dbj|BAG01028.1| hypothetical protein MAE_12060 [Microcystis aeruginosa NIES-843]
          Length = 264

 Score =  232 bits (592), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 64/239 (26%), Positives = 115/239 (48%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG      G+        K    + + QM  VG   + + ++ +   G V   Q A +  
Sbjct: 18  LGAAGLLAGQTFLHILNGKIHRRNTLEQMSIVGPESLTIALITAAFVGMVFTIQVAREFI 77

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            FGA  F   ++S+   RE+  +LTAV++AGR GSA  AEIG+M++ E+IDA+  +  D 
Sbjct: 78  FFGAGSFVGGVLSLALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQIDALYILKTDP 137

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           +  L+ PR+ A  + LPLLTI++  + ++G   +    Y I +++F     +     ++ 
Sbjct: 138 IDYLVIPRVIACSLMLPLLTIISLVTGLLGGLFISDSLYGISYSLFLQSAQNFLETWDLI 197

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           + ++K+      I I+    G      +  +G+  TT VV S+  + + +   +   F 
Sbjct: 198 SSMLKSLIFGVLIAIIGCSWGLTTTGGAKGVGQSTTTAVVTSLLAIFVANFFLSWLMFQ 256


>gi|86147572|ref|ZP_01065882.1| putative ABC superfamily transport protein [Vibrio sp. MED222]
 gi|85834611|gb|EAQ52759.1| putative ABC superfamily transport protein [Vibrio sp. MED222]
          Length = 259

 Score =  232 bits (592), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 77/258 (29%), Positives = 128/258 (49%), Gaps = 2/258 (0%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           I K I      + +     G              K K F L L++Q Y VGV  + ++++
Sbjct: 2   IAKTIAGVGKRALAICESFGRASLMLFGALFGIPKLKNFPL-LVKQFYSVGVQSLAIILV 60

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
                G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG
Sbjct: 61  SGLFIGMVLSLQGYVVLIDYGAEGNLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIG 120

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
            MK  E+I ++  M +D ++ +I+PR+WA +IS+PLL ++     I GA +V   +  I 
Sbjct: 121 LMKATEQISSLEMMAVDPLKRIIAPRLWAGLISMPLLAMIFMAVGIWGAQLVGVDWKGID 180

Query: 294 FAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
              F+S   S+  L  +I   +IK    A  +  +A+  G+     S  + +  T  VV 
Sbjct: 181 HGSFWSAMQSSVELGRDIGNSMIKCMVFAITVTWIALFNGYDAVPTSEGISQATTRTVVH 240

Query: 353 SISIVIIIDSLFAIFYFA 370
           S   V+ +D +     F 
Sbjct: 241 SSLAVLGLDFVLTALMFG 258


>gi|330950264|gb|EGH50524.1| hypothetical protein PSYCIT7_02422 [Pseudomonas syringae Cit 7]
          Length = 265

 Score =  232 bits (592), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 70/267 (26%), Positives = 138/267 (51%), Gaps = 8/267 (2%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
            S  +    +G+  +  +         L   +   G   +S          L+RQ+Y VG
Sbjct: 4   KSLMDRVSLLGRSAIDIVTVLGRSGLFLVHALLGRGGAGSS-------FQLLVRQLYSVG 56

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
           V  + ++++     G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+
Sbjct: 57  VMSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRA 116

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  ISLP+L ++ +   I GAS 
Sbjct: 117 GSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFSVVGIWGASW 176

Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           V   +  +    F+S   ++ +   ++  G+IK+   A  +  +A+ +G+     S  + 
Sbjct: 177 VAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCEPTSEGIS 236

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  T  VV +   V+ +D +     F 
Sbjct: 237 RATTRTVVYASLAVLGLDFILTALMFG 263


>gi|85860995|ref|YP_463197.1| ABC transporter permease [Syntrophus aciditrophicus SB]
 gi|85724086|gb|ABC79029.1| ABC transporter permease protein [Syntrophus aciditrophicus SB]
          Length = 381

 Score =  232 bits (592), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 82/367 (22%), Positives = 165/367 (44%), Gaps = 6/367 (1%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
            V R +G+W +      A+++  A+++ I +   I D+  +   D+     ++ F+ K  
Sbjct: 21  LVLRLSGDWMANGRLPDAEEIRQALSQQIPAPRIIFDVVGLGAWDSG----LLIFLAKVF 76

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
              +  G+S     L   +          ++        S  +    +    + F     
Sbjct: 77  DICRGNGISVDSSGLPPGVCRLLELASPEKQRSGVTREKSPPSFLVRVADATLDFGRGFK 136

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
                +G    +          F+   L LI Q    G   +P+V LIS + G ++A   
Sbjct: 137 DMLAFVGDATLSVLRMLRGKPGFRRSDLILILQ--ETGAQALPIVSLISLLVGMILAFVA 194

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A QL  FG +I+  D++ I  +R +G ++T +++AGR+G+A  A++G M++NEEIDA+  
Sbjct: 195 AIQLRMFGVQIYVADVVGIAMVRVMGAIMTGIIMAGRTGAAFAAQLGMMQVNEEIDALEV 254

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +G+  V  L+ PR+ AL++ +PLL I ++   ++G  IV     D+    ++    +  +
Sbjct: 255 LGVSPVDFLVLPRLLALMLMMPLLCIYSDLMGVVGGLIVGVGMLDLGVIEYYHETVNAVS 314

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L   + GL  +      + +     G     +++++G   T+ VV  I  +++  ++  +
Sbjct: 315 LTYFWIGLFHSFVFGVLVALAGCLRGLQCERNASAVGFAATSAVVTGIVSIVVATAIITL 374

Query: 367 FYFAIGI 373
               +GI
Sbjct: 375 LCQVLGI 381


>gi|163749276|ref|ZP_02156525.1| hypothetical protein KT99_08438 [Shewanella benthica KT99]
 gi|161330995|gb|EDQ01921.1| hypothetical protein KT99_08438 [Shewanella benthica KT99]
          Length = 260

 Score =  232 bits (591), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 77/256 (30%), Positives = 128/256 (50%), Gaps = 2/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        +    LG          A   + KG L   ++Q+Y VGV  + ++++  
Sbjct: 5   ESLANLGRGGIALVTGLGKAGIMLWGAIAHKPRLKG-LPLFVKQLYVVGVQSMVLILISG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L  FG E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +I+PR WA ++SLPLLT++     I G  IV  ++  I   
Sbjct: 124 KSTEQLSSLEMMAIDPLRQIIAPRFWAGVVSLPLLTLMFTAIGIYGGYIVGVEWKGIDGG 183

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   ++     +I   LIK+      +  +A+  G+ V  +   + K  T  VVQS 
Sbjct: 184 SFWSILQASVEWREDIVNCLIKSFLFGIVVTWIALYRGYQVVPNPEGISKATTQTVVQSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D L     F 
Sbjct: 244 LAVLALDFLLTAIMFG 259


>gi|255549070|ref|XP_002515591.1| Inner membrane protein yrbE, putative [Ricinus communis]
 gi|223545535|gb|EEF47040.1| Inner membrane protein yrbE, putative [Ricinus communis]
          Length = 350

 Score =  232 bits (591), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 57/236 (24%), Positives = 115/236 (48%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
           V+   G+      K K    + ++Q+  VG   V V +L S   G     Q   + ++ G
Sbjct: 105 VLVVAGQVIIRILKGKVHWRNTLQQLERVGPKSVGVCLLTSAFVGMAFTIQFVREFTKLG 164

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
            +     ++++   RE+  ++T++++AGR GSA  AE+G+M+++E+ D +R +G + V  
Sbjct: 165 LQRSVGGVLALAFSRELSPVVTSIVVAGRIGSAYAAELGTMQVSEQTDTLRVLGTNPVDY 224

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L++PR+ A  ++LPLLT++     +  ++I+    + +   +            +I + +
Sbjct: 225 LVTPRVIASCVALPLLTLMCFTVGLASSAILADGVFGVSINIILDSAQRVLKSWDIISAM 284

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           IK+      I IV+   G      +  +G+  T+ VV S+  + I D   +  +F 
Sbjct: 285 IKSQVFGAIISIVSCAWGVTTSGGAKGVGESTTSAVVISLVGIFIADFALSYCFFQ 340


>gi|157373873|ref|YP_001472473.1| hypothetical protein Ssed_0734 [Shewanella sediminis HAW-EB3]
 gi|157316247|gb|ABV35345.1| protein of unknown function DUF140 [Shewanella sediminis HAW-EB3]
          Length = 260

 Score =  232 bits (591), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 79/265 (29%), Positives = 133/265 (50%), Gaps = 9/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N    +G+  + F+        +L   I       A   + KGF L  ++Q+Y VGV 
Sbjct: 3   MTNQLASLGRLTIDFVVGLGRAGVMLWGAI-------ARKPRIKGFPL-FVKQLYVVGVQ 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++ +     G V+A QG   L  FG E     ++++  LRE+G ++TA++ AGR+GS
Sbjct: 55  SMVLIFVSGLFIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGS 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++ ++  M +D +R +I+PR WA ++SLPLL ++     I G  +V 
Sbjct: 115 ALTAEIGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVVSLPLLALIFTAVGIYGGHVVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
            ++  I    F+S   ++     +I   +IK+   A  +  +A+  G+ V  +   + K 
Sbjct: 175 VEWKGIDSGSFWSILQASVEWREDIVNCIIKSLVFAVVVTWIALYRGYRVIPNPEGISKA 234

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VVQS   V+ +D L     F 
Sbjct: 235 TTQTVVQSSLAVLALDFLLTAVMFG 259


>gi|323699476|ref|ZP_08111388.1| protein of unknown function DUF140 [Desulfovibrio sp. ND132]
 gi|323459408|gb|EGB15273.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans
           ND132]
          Length = 267

 Score =  232 bits (591), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 71/243 (29%), Positives = 125/243 (51%), Gaps = 5/243 (2%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G +     +     +   G    ++RQ+Y++GV  V V+ LI   TG V+  Q  + LS
Sbjct: 25  IGSLTLFLLDSMRLVFAGLGQFPKIVRQIYFIGVQSVSVIALIGLFTGMVMGMQLYYALS 84

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            FGA+ F    +++  +RE+  +LTA+M+ GR+GSA+ AEIG M+I+E+IDA+  M ++ 
Sbjct: 85  VFGADGFLGTGVALSMVRELAPVLTAIMLTGRAGSAMTAEIGVMRISEQIDALTIMDINP 144

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           +R L++P++ A +IS P+LT   N  A+ G  +   K       V++SR   +    +I 
Sbjct: 145 MRYLVAPKMAACLISFPILTAFFNLIALWGGWLTGVKLLGANAGVYWSRVSGSLDWDDIE 204

Query: 312 TGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
            G IK+      +  +   EG+             + +  T+ VV+S  I++  D +   
Sbjct: 205 GGFIKSIVFGLLVCTICCFEGYNTHLRSGHAGPEGVSQSTTSAVVKSCVIILAADYILTS 264

Query: 367 FYF 369
             +
Sbjct: 265 LLW 267


>gi|262273844|ref|ZP_06051657.1| uncharacterized ABC transporter permease component YrbE [Grimontia
           hollisae CIP 101886]
 gi|262222259|gb|EEY73571.1| uncharacterized ABC transporter permease component YrbE [Grimontia
           hollisae CIP 101886]
          Length = 260

 Score =  232 bits (591), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 68/254 (26%), Positives = 126/254 (49%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +      + + +  +G              + K     L+ Q+Y VGV  + ++++    
Sbjct: 6   VQSLGARAMAVSQTMGRATFVLLGALVGKPQPKKMFPLLLTQIYSVGVRSLAIIMVSGLF 65

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V++ QG   L+ FGAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 66  IGMVLSLQGYLVLADFGAESSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +++PR WA +IS+PLL ++     I G  +V   +  I +  +
Sbjct: 126 TEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLAMIFMMVGIWGGQLVGVDWKGIDYGSY 185

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           ++   S+  L  +I    IK+   A  +  +A+  G+     S  + +  T  VV S   
Sbjct: 186 WAVMQSSVELGYDIGQSFIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLA 245

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 246 VLGLDFVLTALMFG 259


>gi|83311193|ref|YP_421457.1| ABC-type transport system involved in resistance to organic
           solvents [Magnetospirillum magneticum AMB-1]
 gi|82946034|dbj|BAE50898.1| ABC-type transport system involved in resistance to organic
           solvents [Magnetospirillum magneticum AMB-1]
          Length = 258

 Score =  232 bits (591), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 64/264 (24%), Positives = 123/264 (46%), Gaps = 7/264 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N+   +G+  + F+      +    + +S+T       +  +  L   I     +G  
Sbjct: 1   MSNVLAPVGRVFLAFLAHVGRLSAFTAMAVSHT---VRPPFYPRLILREFIE----IGYF 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PVV L +  TG V+A Q     S+F AE     ++ +   RE+  +L  +M+AGR G+
Sbjct: 54  SLPVVGLTAVFTGMVLALQSYSGFSRFAAEGAVATVVVLSVTRELAPVLAGLMVAGRIGA 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           ++ AEIG+M++ E+IDA+ T+  +  + L++PRI A  + LP L ++A+   + G  IV 
Sbjct: 114 SMAAEIGTMRVTEQIDALTTLSTNPFKYLVAPRILAGTLMLPFLVLIADIIGVFGGYIVG 173

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
                   A + +R        ++ +GL KA      I ++    G+     +  +G   
Sbjct: 174 VYKLGFNSATYIARTWEFLEPLDVISGLTKAAVFGFLITLMGCYNGYYSKGGAQGVGAAT 233

Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370
           T  VV +  ++++ + +    +F 
Sbjct: 234 TNAVVSAAIMILVFNYVITAMFFG 257


>gi|212703465|ref|ZP_03311593.1| hypothetical protein DESPIG_01509 [Desulfovibrio piger ATCC 29098]
 gi|212673125|gb|EEB33608.1| hypothetical protein DESPIG_01509 [Desulfovibrio piger ATCC 29098]
          Length = 264

 Score =  232 bits (591), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 70/255 (27%), Positives = 126/255 (49%), Gaps = 5/255 (1%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           +           LG V     +     +     +   I+Q+Y +G   + V++LI    G
Sbjct: 10  RLGAAVLRMLDSLGAVTLFMLDGLRHIFTSPRIVPRTIQQLYVIGYKSLFVILLIGIFCG 69

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+  QG + L QFG+       +S+  +RE+G +LTA+M+AGR+GS++ AEIG M+I++
Sbjct: 70  MVLGLQGYYTLVQFGSVGMLGSAVSLSLIRELGPVLTAIMLAGRAGSSMAAEIGVMRISD 129

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +IDA+  M ++ +  L+SPR+ A +++ PLLT + +   IIG  +       I    +  
Sbjct: 130 QIDALDVMDINSMAYLVSPRLVASLLAFPLLTAIFDVIGIIGGYLTGVLMLHINEGAYLY 189

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCVVQSI 354
           R  S+ T+ ++  G IK+      +  V   +G+        V   ++G   T+ VV S 
Sbjct: 190 RIASSVTMNDVAGGFIKSLVFGLLVATVCCHQGYTTHMRRDSVGPEAVGNATTSAVVISC 249

Query: 355 SIVIIIDSLFAIFYF 369
            ++++ D +   F  
Sbjct: 250 VLILVADYVLTSFLL 264


>gi|152978463|ref|YP_001344092.1| hypothetical protein Asuc_0787 [Actinobacillus succinogenes 130Z]
 gi|150840186|gb|ABR74157.1| protein of unknown function DUF140 [Actinobacillus succinogenes
           130Z]
          Length = 259

 Score =  232 bits (591), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 127/255 (49%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K I  F          LG            + +F+     LI+Q++ +GV  + ++++  
Sbjct: 4   KLISGFGATVIKSVQALGRSGFMLFGALVGTPQFRKHTPLLIKQLHVLGVQSLLIILMSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
           F  G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  FFIGMVLGLQGYVVLVDFAAEANVGQLVALALLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +I+PR WA +I++P+L +L     +IG S++   +  I   
Sbjct: 124 KATEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPILAVLFTAVGVIGGSLIGVDWKGIDGG 183

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            F+S   +     ++  G IK+   A  +  VA+  G+     S  + +  T  VV S  
Sbjct: 184 SFWSVMQNAVASKDLLYGFIKSVVFAFTVVWVALFNGYDCVPTSEGISQATTKTVVHSSL 243

Query: 356 IVIIIDSLFAIFYFA 370
           +V+ +D +     F 
Sbjct: 244 LVLGLDFVLTAIMFG 258


>gi|330815311|ref|YP_004359016.1| ABC transporter, inner membrane subunit [Burkholderia gladioli
           BSR3]
 gi|327367704|gb|AEA59060.1| ABC transporter, inner membrane subunit [Burkholderia gladioli
           BSR3]
          Length = 255

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 58/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ +V  +  +   + +   ++                   + +Q++++G     
Sbjct: 1   MISAIGRYVVGGLERTGYASRLFVRLVLECFALLRRP-------RLVTKQIHFLGNYSFV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++GAE     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGAEQSLGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D ++ +++PR+WA II++PLL+ +     ++G   V    
Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKTVVAPRMWAGIITMPLLSAIFCAVGVLGGYFVGVVL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+      +  ++  G++K+     A+   A+ +G+        + +  T 
Sbjct: 174 IGVDPGAFWSQMQGGVDVWSDVGNGVLKSVVFGFAVTFTALYQGYEAKPTPEGVSRATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVYASLAVLGLDFLLTALMFS 255


>gi|223940418|ref|ZP_03632271.1| protein of unknown function DUF140 [bacterium Ellin514]
 gi|223890913|gb|EEF57421.1| protein of unknown function DUF140 [bacterium Ellin514]
          Length = 259

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 72/244 (29%), Positives = 123/244 (50%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                    LG +   T E  +S +  KG   + I Q+Y++GV    VV++    TG V+
Sbjct: 7   RFVAEWLQGLGRISLLTKEALSSLFSLKGSWGNFIYQLYFIGVKSQSVVLITGAFTGMVL 66

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
             Q  +Q  Q   +  ++ ++S+    E+G +LTA+M+AGR G+A+ AEIG+MK+ E++D
Sbjct: 67  CAQTYYQFHQVKLDTATLAVVSVSMCSELGPVLTALMVAGRVGAAMAAEIGTMKVTEQVD 126

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+RT+    V  L+ PR+ A ++SLPLLT  A    II   +V      I     ++   
Sbjct: 127 ALRTLATHPVDYLVVPRLTASVVSLPLLTAEAIAVGIISGYMVGVYLLGIDPVYSYTNML 186

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
                +++ TG+IK+      I I+   +G   G  +  +G+  T  VV +   ++I + 
Sbjct: 187 KYTNSSDVMTGIIKSVIFGVIIAIIGCYKGMTCGEGAEGVGRATTEAVVYASITILISNF 246

Query: 363 LFAI 366
              +
Sbjct: 247 FLTL 250


>gi|163788065|ref|ZP_02182511.1| ABC transporter, permease [Flavobacteriales bacterium ALC-1]
 gi|159876385|gb|EDP70443.1| ABC transporter, permease [Flavobacteriales bacterium ALC-1]
          Length = 260

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 78/237 (32%), Positives = 126/237 (53%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           S    +G +   TG F    +K       L+ Q Y +G   + +V +  F+ G V+  Q 
Sbjct: 13  SFLIEIGDMSYFTGRFFKELFKRPFEFKELLNQCYSMGNKSLLLVGITGFIIGLVLTLQT 72

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
              L +FGA  +   ++SI  +REIG +LTA++ AGR GS I AEIGSMK+ E+IDA+  
Sbjct: 73  RPTLMEFGAVSWMPSMVSISIVREIGPILTALVCAGRIGSGIGAEIGSMKVTEQIDAMEV 132

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
            G +  + L+  R+ A+ + LPLL I+ +  A++G+ +V     D+ F ++F++      
Sbjct: 133 SGTNPFKYLVVTRVLAVTLMLPLLVIIGDAVALLGSYLVESVKGDVSFVLYFNQVFDALK 192

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             +I    IK+ F   AIGIV   +G+     +  +GK   T VV +  ++ IID +
Sbjct: 193 FGDIMPATIKSFFFGLAIGIVGCYKGYYCKKGTAGVGKAANTAVVFTSLLLFIIDFI 249


>gi|302185305|ref|ZP_07261978.1| putative ABC transport system permease protein [Pseudomonas
           syringae pv. syringae 642]
          Length = 265

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 70/267 (26%), Positives = 138/267 (51%), Gaps = 8/267 (2%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
            S  +    +G+  +  +         L   +   G   +S          L+RQ+Y VG
Sbjct: 4   KSLMDRVRLLGRSAIDIVTVLGRSGLFLVHALLGRGGAGSS-------FQLLVRQLYSVG 56

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
           V  + ++++     G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+
Sbjct: 57  VMSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRA 116

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  ISLP+L ++ +   I GAS 
Sbjct: 117 GSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFSVVGIWGASW 176

Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           V   +  +    F+S   ++ +   ++  G+IK+   A  +  +A+ +G+     S  + 
Sbjct: 177 VAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCDPTSEGIS 236

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  T  VV +   V+ +D +     F 
Sbjct: 237 RATTRTVVYASLAVLGLDFILTALMFG 263


>gi|54310335|ref|YP_131355.1| hypothetical protein PBPRA3247 [Photobacterium profundum SS9]
 gi|46914776|emb|CAG21553.1| conserved hypothetical protein [Photobacterium profundum SS9]
          Length = 260

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 73/254 (28%), Positives = 127/254 (50%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I         +   +G           S  + K     L++Q+Y VGV  + ++++    
Sbjct: 6   IASVGRQGIEKFQTIGRATLLLYGALVSKPQPKKMFPLLMKQLYSVGVLSIAIIMVSGLF 65

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V++ QG   L  FGAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 66  IGMVLSLQGYIVLVDFGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +I+PR WA +IS+PLL+++ +   I G  +V   +  I +  F
Sbjct: 126 TEQLSSMEMMAVDPLRQVIAPRFWAGVISMPLLSMMFSAVGIWGGQLVGVDWKGIDYGSF 185

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   ++  L  +I   LIK+   A  I  +A+  G+     S  +    T  VV +   
Sbjct: 186 WSVMQASVELGEDIGNSLIKSVVFAITITWIAVFNGYDAVPTSEGISLATTRTVVNASLA 245

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 246 VLGLDFVLTALMFG 259


>gi|91201081|emb|CAJ74139.1| strongly similar to ABC-transporter, permease [Candidatus Kuenenia
           stuttgartiensis]
          Length = 260

 Score =  231 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 7/255 (2%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           IG  + KFI +           +          Y F+     +I+Q+ ++GV  V V++L
Sbjct: 11  IGNSLHKFIRELGKMGCFFANALFYM---LFPPYLFR----RIIKQINFIGVKTVLVIVL 63

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
               TG V+A Q  + L +FGAE      +++  ++E+G ++ A+M+ GR+GSAI AEIG
Sbjct: 64  TGTFTGMVLALQMYYVLIKFGAEARLGPAVAMSLIKELGPVICALMVTGRAGSAITAEIG 123

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
            M+I+E++DA+  M L+  + LI P I A +ISLPLL  +     + G   V      + 
Sbjct: 124 IMRISEQVDALDAMALNPYKYLIIPNIIAGVISLPLLNAIFVVLGVFGGYAVGVGLMGVS 183

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              +F   +      ++F G  K+      I  ++  +GF  G  +  + K  T  VV S
Sbjct: 184 SGTYFGGINDFVAARDVFEGFYKSLSFGVLITWISCYKGFYTGYGAEGVSKATTQSVVIS 243

Query: 354 ISIVIIIDSLFAIFY 368
             +++I D       
Sbjct: 244 SVVILIWDYFMTSLL 258


>gi|320107063|ref|YP_004182653.1| hypothetical protein AciPR4_1853 [Terriglobus saanensis SP1PR4]
 gi|319925584|gb|ADV82659.1| protein of unknown function DUF140 [Terriglobus saanensis SP1PR4]
          Length = 259

 Score =  231 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 77/254 (30%), Positives = 127/254 (50%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +V  ++ +      L      +G    S      +   +  QM  +G   +P+VIL  F 
Sbjct: 3   LVSPVDFTKRSIAALQEYSLLSGRAMKSLLTPPIYWDEIFTQMDSIGFGSLPIVILAGFF 62

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG V+A Q A  L QFGA   +  L+++  ++E+G +LT +M++GR+ S I +E+GSM++
Sbjct: 63  TGCVLALQSATALQQFGAVSKTGSLVALSMVKELGPVLTGLMVSGRNASGIASELGSMRV 122

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+R +G D VR L+ PRI A +I L  L+IL+    I G ++V      +  + +
Sbjct: 123 TEQIDAMRALGTDPVRKLVLPRIAATVIMLAFLSILSAAMGIAGGALVSVALLGLNSSAY 182

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
           F   +++    ++  GL+K  F    I  V    G      +  +GK  T  VV S   +
Sbjct: 183 FHSSYASLVYGDVVQGLVKPVFFGFIIASVGCYFGMTTKGGTQGVGKSTTQAVVISSVCI 242

Query: 358 IIIDSLFAIFYFAI 371
           I++D L       I
Sbjct: 243 IVVDFLLTRLMIGI 256


>gi|165976711|ref|YP_001652304.1| permease [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
 gi|303250627|ref|ZP_07336824.1| permease [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|303252079|ref|ZP_07338248.1| permease [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|307246209|ref|ZP_07528290.1| hypothetical protein appser1_14130 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307250543|ref|ZP_07532487.1| hypothetical protein appser4_13230 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307252926|ref|ZP_07534814.1| hypothetical protein appser6_14370 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307255189|ref|ZP_07537007.1| hypothetical protein appser9_14250 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|165876812|gb|ABY69860.1| probable permease [Actinobacillus pleuropneumoniae serovar 3 str.
           JL03]
 gi|302649061|gb|EFL79248.1| permease [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|302650615|gb|EFL80774.1| permease [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|306852818|gb|EFM85042.1| hypothetical protein appser1_14130 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306857436|gb|EFM89548.1| hypothetical protein appser4_13230 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306859564|gb|EFM91589.1| hypothetical protein appser6_14370 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306862062|gb|EFM94038.1| hypothetical protein appser9_14250 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
          Length = 258

 Score =  231 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 76/264 (28%), Positives = 131/264 (49%), Gaps = 7/264 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N    IG  ++ FI        +L       G       +F+     LI+Q+Y +GV 
Sbjct: 1   MINFISGIGSTVIDFIRAFGRATFML------LGALIGKP-QFRKHTPLLIKQLYVLGVQ 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + +++L     G V+  QG   L  F AE     L+S+  LRE+G ++TA++ AGR+GS
Sbjct: 54  SLLIIMLSGLFIGMVLGLQGYVVLVDFAAETSLGTLVSLSLLRELGPVVTALLFAGRAGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+P+L  +     I G S+V 
Sbjct: 114 ALTAEIGLMKATEQLSSLEMMAVDPLRRIIAPRFWAGVISMPILAAIFTAIGIWGGSLVG 173

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
             +  +    F+S   ++   +++  G IK+   A A+  +A+  G+     S  + +  
Sbjct: 174 VDWKGVDGGSFWSVMQNSVDWSDLINGFIKSIIFAFAVVWIALFNGYDSVATSEGISQAT 233

Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370
           T  VV +  +V+ +D +     F 
Sbjct: 234 TRTVVHASLVVLGLDFILTAIMFG 257


>gi|221134714|ref|ZP_03561017.1| hypothetical protein GHTCC_07282 [Glaciecola sp. HTCC2999]
          Length = 258

 Score =  231 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 69/255 (27%), Positives = 132/255 (51%), Gaps = 2/255 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +V+   ++       G           +  + K  +   ++Q+Y VGV  + ++++    
Sbjct: 4   VVQVGANTLDTIRSFGRAFLMLTGALIAVPQLKN-IRLTLQQIYVVGVQSLLIILVSGLF 62

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+A QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 63  IGMVMALQGYTILVGYGAEGSLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 122

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +++PR+WA IIS+P+L I+ +   I+G  +V   +  +    +
Sbjct: 123 TEQLSSLEMMAVDPLRRVVAPRVWAGIISMPMLAIIFSAIGILGGHLVGVDWLGVDSGSY 182

Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   +T     ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV S   
Sbjct: 183 WSIMQATVDWNKDVVNGIIKSIVFAIVVTWIAIFKGYDAVPTSEGISQATTQTVVYSSLA 242

Query: 357 VIIIDSLFAIFYFAI 371
           V+ +D +     F I
Sbjct: 243 VLGLDFVLTALMFGI 257


>gi|183597953|ref|ZP_02959446.1| hypothetical protein PROSTU_01302 [Providencia stuartii ATCC 25827]
 gi|188022725|gb|EDU60765.1| hypothetical protein PROSTU_01302 [Providencia stuartii ATCC 25827]
          Length = 260

 Score =  231 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 71/256 (27%), Positives = 121/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + I              G              +F      LI+Q+Y VGV  + +V +  
Sbjct: 4   EAIAALGRRWIEIFSAFGRAGYMLFRSLIGKPEFSKQWPLLIKQLYAVGVQSLLIVAVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ F AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLVLTTFSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +I+PR WA  IS+PLL+++     I+G ++V   +  I   
Sbjct: 124 KATEQISSLEMMAVDPLRRVIAPRFWAGFISMPLLSLIFVAVGILGGALVGVDWKGIDEG 183

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F++   S+     +I    IK+   A  +  +A+  G+     S  + +  T  VV + 
Sbjct: 184 FFWASMQSSVDWRMDIVNCFIKSLVFAITVTWIALFNGYDAIPTSEGISQATTRTVVHAS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|28899437|ref|NP_799042.1| ABC transporter [Vibrio parahaemolyticus RIMD 2210633]
 gi|153839285|ref|ZP_01991952.1| toluene tolerance protein Ttg2B [Vibrio parahaemolyticus AQ3810]
 gi|260363394|ref|ZP_05776246.1| organic solvent ABC transporter, permease protein [Vibrio
           parahaemolyticus K5030]
 gi|260879329|ref|ZP_05891684.1| organic solvent ABC transporter, permease protein [Vibrio
           parahaemolyticus AN-5034]
 gi|260895712|ref|ZP_05904208.1| organic solvent ABC transporter, permease protein [Vibrio
           parahaemolyticus Peru-466]
 gi|260900285|ref|ZP_05908680.1| organic solvent ABC transporter, permease protein [Vibrio
           parahaemolyticus AQ4037]
 gi|28807673|dbj|BAC60926.1| putative ABC superfamily transport protein [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|149747186|gb|EDM58174.1| toluene tolerance protein Ttg2B [Vibrio parahaemolyticus AQ3810]
 gi|308087410|gb|EFO37105.1| organic solvent ABC transporter, permease protein [Vibrio
           parahaemolyticus Peru-466]
 gi|308093131|gb|EFO42826.1| organic solvent ABC transporter, permease protein [Vibrio
           parahaemolyticus AN-5034]
 gi|308107579|gb|EFO45119.1| organic solvent ABC transporter, permease protein [Vibrio
           parahaemolyticus AQ4037]
 gi|308111178|gb|EFO48718.1| organic solvent ABC transporter, permease protein [Vibrio
           parahaemolyticus K5030]
 gi|328471426|gb|EGF42321.1| ABC transporter [Vibrio parahaemolyticus 10329]
          Length = 263

 Score =  231 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +      + +     G           S  +       LI+Q+Y VGV  + ++++  
Sbjct: 7   QFVASLGRRTLAICEAFGRATLMLVGAIFSKPQPSKSFPLLIKQLYSVGVQSLAIIVVSG 66

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 67  LFIGMVLSLQGYVVLVDYGAEGSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 126

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D ++ +I+PR WA  IS+PLL ++     I GA +V   +  +   
Sbjct: 127 KATEQLSSLEMMAVDPLKRVIAPRFWAGAISMPLLAMIFMAVGIWGAQLVGVDWKGVDHG 186

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F++   S+  L  +I   +IK    A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 187 SFWAAMQSSVELGQDIGNSMIKCFVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 246

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 247 LAVLGLDFVLTALMFG 262


>gi|296532300|ref|ZP_06895039.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Roseomonas cervicalis
           ATCC 49957]
 gi|296267376|gb|EFH13262.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Roseomonas cervicalis
           ATCC 49957]
          Length = 261

 Score =  231 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 64/266 (24%), Positives = 129/266 (48%), Gaps = 7/266 (2%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
           N   N    IG+ ++     + + A      +          +  + FL + +     +G
Sbjct: 2   NLILNALAAIGRGVLGACRAAGAIALF---AVEGVSHLVRPPFYPRLFLRAFVE----IG 54

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
              +PVV L +  TG V+A Q     S+FGAE    +++ +   RE+G +L  +M+AGR 
Sbjct: 55  YFSLPVVSLTAIFTGMVLALQSYSGFSRFGAESAIANVVVLSITRELGPVLAGLMVAGRI 114

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           G+A  AEIG+M++ ++IDA+ T+  + ++ L++PR+ A  +++PLL ++A+   ++G  +
Sbjct: 115 GAAFAAEIGTMRVTDQIDALTTLSTNPMKYLVAPRLLAGTLAMPLLVVVADILGVMGGWL 174

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
           +         A + +   +     ++ +GL+KA      I ++    G+     +  +G 
Sbjct: 175 IGTAQLGFTSASYLTSTLNFVQPMDVISGLVKAAVFGFTITLMGCYSGYNSRGGAQGVGA 234

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370
             T  VV S  +++ +D +    +F 
Sbjct: 235 ATTRAVVASSILILALDYILTAMFFG 260


>gi|320538922|ref|ZP_08038598.1| putative phospholipid transporter subunit: membrane component of
           ABC superfamily [Serratia symbiotica str. Tucson]
 gi|320031082|gb|EFW13085.1| putative phospholipid transporter subunit: membrane component of
           ABC superfamily [Serratia symbiotica str. Tucson]
          Length = 260

 Score =  231 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 68/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +          +   G              + +     L++QMY +GV  + ++++  
Sbjct: 4   QALASLGRRCIDTSASFGRAGLMLFNALVGQPEPRKQWPLLLKQMYSIGVQSLLIIMVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYIVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +++PR WA +ISLPLLTI+     ++G +IV   +  I   
Sbjct: 124 KATEQISSLEMMAVDPLRRIVAPRFWAGLISLPLLTIIFVALGMLGGAIVGVDWKGIDSG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S          ++   L+K+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQGAVEWKKDLLNCLLKSVVFAITVTWIAIFNGYDAVPTSTGISQATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|89093955|ref|ZP_01166900.1| probable permease of ABC transporter [Oceanospirillum sp. MED92]
 gi|89081841|gb|EAR61068.1| probable permease of ABC transporter [Oceanospirillum sp. MED92]
          Length = 259

 Score =  231 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 61/251 (24%), Positives = 122/251 (48%), Gaps = 1/251 (0%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
                  +    G       +   +  +       L++Q+Y+VGV  + ++++     G 
Sbjct: 7   LGRHGLDRLAAFGRSSMILFQALVAKPQPLMMFPLLVQQIYFVGVLSLIIIVVSGLFIGM 66

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+  QG   L  +G+E     ++++  +RE+  ++TA++ AGR+GSA+ AEIG MK  E+
Sbjct: 67  VLGLQGYTILVDYGSEQAVGQMVALSLVRELAPVVTALLFAGRAGSALTAEIGLMKATEQ 126

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           + ++  +G+D +R +I+PR WA  I LP+L+ +     + G ++V   +  I    F++ 
Sbjct: 127 LSSLEMIGVDPLRRIIAPRFWAGFICLPILSAIFAIVGVYGGALVSIDWLGIYDGSFWAN 186

Query: 301 FHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
             ++     ++  GL+KA      +  +A+ +G+     S  + +  T  VV S   V+ 
Sbjct: 187 MQNSVNFYEDVMNGLVKAVVFGFVVTWIAVFQGYDCIPTSEGISQATTKTVVYSSLAVLG 246

Query: 360 IDSLFAIFYFA 370
           +D +     F 
Sbjct: 247 LDFILTAVMFG 257


>gi|237749420|ref|ZP_04579900.1| ABC transport system permease [Oxalobacter formigenes OXCC13]
 gi|229380782|gb|EEO30873.1| ABC transport system permease [Oxalobacter formigenes OXCC13]
          Length = 258

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 65/265 (24%), Positives = 127/265 (47%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N   ++G K  K I++      I   +     +              +  Q++++G  
Sbjct: 1   MSNFVSNLGYKTRKLIDNIGYATRIFATMFKALPQILKRP-------RLITDQIFFIGNK 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++ +     G V+  QG + L ++G+E     ++++   RE+G ++TA++ AGR+G+
Sbjct: 54  SLLIICVSGLFVGFVLGLQGYYILIRYGSEQALGVMVALSLTRELGPVVTALLYAGRAGT 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           ++ AEIG MK  E++ A+  M ++ V  +++PR WA IIS+PLL  L + + +IG  IV 
Sbjct: 114 SLTAEIGLMKAGEQLAAMDMMAVNPVDRILAPRFWAGIISMPLLATLFSAAGVIGGYIVG 173

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                +    F+S+      +  +I  G+IK+     A+  +A+ +G+        +   
Sbjct: 174 VVLIGVDDGAFWSQMQQGVDIWNDIGNGVIKSLVFGFAVTFMALFQGYEARPTPEGVSSA 233

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV S  +V+ +D +     F 
Sbjct: 234 TTRTVVYSSLLVLWLDFIMTALMFN 258


>gi|145630177|ref|ZP_01785959.1| hypothetical protein CGSHi22421_08998 [Haemophilus influenzae
           R3021]
 gi|260581861|ref|ZP_05849657.1| ABC transporter permease [Haemophilus influenzae NT127]
 gi|144984458|gb|EDJ91881.1| hypothetical protein CGSHi22421_08998 [Haemophilus influenzae
           R3021]
 gi|260095054|gb|EEW78946.1| ABC transporter permease [Haemophilus influenzae NT127]
          Length = 261

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 78/267 (29%), Positives = 136/267 (50%), Gaps = 8/267 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N    +GK+++ F         +L       G       + +     L++QM+ +GV 
Sbjct: 2   IVNFISTLGKQVIDFFRALGRAGFML------FGALIGKP-QIRKHFPLLVKQMHVLGVQ 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + +++L     G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GS
Sbjct: 55  SLLIILLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGS 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+P+L+IL     I G S+V 
Sbjct: 115 ALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPILSILFIAIGIWGGSLVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
             +  +    F+S   ++ + + +I  G IKA F A A+  +A+  G+     S  + + 
Sbjct: 175 VDWKGVDSGSFWSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYDCMPTSEGISQA 234

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAIG 372
            T  VV +  +V+ +D +     F  G
Sbjct: 235 TTRTVVHASLVVLGLDFILTAIMFGAG 261


>gi|67926111|ref|ZP_00519354.1| Protein of unknown function DUF140 [Crocosphaera watsonii WH 8501]
 gi|67852045|gb|EAM47561.1| Protein of unknown function DUF140 [Crocosphaera watsonii WH 8501]
          Length = 263

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 67/248 (27%), Positives = 116/248 (46%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                    L   I   G+      K K    + + QM  VG   + + ++ +   G V 
Sbjct: 9   RGLGIWFERLIAAILLGGQVFFHLLKTKIHRRNTLDQMSVVGPESLTIALITAGFVGMVF 68

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
             Q A +   FGA      ++++   RE+  +LTAV++AGR GSA  AEIG+M++ E+ID
Sbjct: 69  TIQVAREFISFGAASTVGGVLALALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQID 128

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +  D V  L+ PR+ A  + LP+L IL+  + + G  ++    YDI   VF +   
Sbjct: 129 ALYMLKTDPVDYLVVPRVLACCLMLPVLNILSLITGMTGGLLIANGLYDISPYVFLTSIR 188

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           +   L ++ T +IK+      I ++    G      +  +G+  TT VV ++  V +++ 
Sbjct: 189 NFLELWDLVTSVIKSVAFGGLIAVIGCSWGLTTTGGAKGVGQSTTTAVVTALLAVFVVNF 248

Query: 363 LFAIFYFA 370
             +   F 
Sbjct: 249 FLSWVMFQ 256


>gi|261868147|ref|YP_003256069.1| ABC transporter permease [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413479|gb|ACX82850.1| conserved ABC-type transport system protein, permease component
           [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 261

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 76/265 (28%), Positives = 133/265 (50%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             NL   +G+  + F         +L       G       +       LI+Q++ +GV 
Sbjct: 2   LTNLISALGRNAINFARAMGRAGFLL------FGALIGKP-QINKHFPLLIKQLHVLGVQ 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + +++L     G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GS
Sbjct: 55  SLLIIMLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGS 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++ ++  M +D +R +I+PR WA +I++P+L+I+     I G S+V 
Sbjct: 115 ALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPILSIIFIAIGIWGGSLVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
             +  +    F+S   S+ T + +I  G IK+ F A A+  +A+  G+     S  + K 
Sbjct: 175 VDWKGVDSGSFWSVMQSSVTWSHDILNGFIKSLFFAIAVVWIALFNGYDCIPTSEGISKA 234

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV +  +++ +D +     F 
Sbjct: 235 TTRTVVHASLVILGLDFVLTAIMFG 259


>gi|307824571|ref|ZP_07654796.1| protein of unknown function DUF140 [Methylobacter tundripaludum
           SV96]
 gi|307734555|gb|EFO05407.1| protein of unknown function DUF140 [Methylobacter tundripaludum
           SV96]
          Length = 260

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 67/265 (25%), Positives = 117/265 (44%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
                  +G K              L   +S                  L+ QM+ +GV 
Sbjct: 1   MIEFLQQLGIKTRTSFTKLGRGTFFLLQTMSGVLSVLPRP-------RLLLNQMHSIGVL 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
              ++ +     G V+  QG + LS FGAE     +++   +RE+G +++A++ AGR+GS
Sbjct: 54  SFLIITISGLFVGMVLGLQGYYTLSDFGAEESLGVMVAASLVRELGPVVSALLFAGRAGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++  +  M +D ++ +ISPR  A  +S+PLL  L +   IIG  +V 
Sbjct: 114 ALTAEIGLMKATEQLSGMEMMAVDPIKRIISPRFLAGFLSMPLLAALFSAVGIIGGQLVG 173

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                +    ++S+  +      +I  G+IK+         +A+ EG+     S  + + 
Sbjct: 174 SGLLGVDEGAYWSQMQAKLDFQDDIINGVIKSIVFGFVASWIALFEGYDAIPTSEGVSRA 233

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV S   ++ +D +     F 
Sbjct: 234 TTRTVVNSAFSILGLDFILTTLMFG 258


>gi|187250741|ref|YP_001875223.1| ABC transporter-like protein [Elusimicrobium minutum Pei191]
 gi|186970901|gb|ACC97886.1| ABC transporter related [Elusimicrobium minutum Pei191]
          Length = 258

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 78/265 (29%), Positives = 141/265 (53%), Gaps = 8/265 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG++I+ F N+     ++L            + +++       ++Q   +G++ + 
Sbjct: 1   MFAVIGREIIIFFNECGKAFNMLRSC---MFWLFKAPFEW----AQAMQQSVTIGINSLT 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAE-IFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
           V  L S  TG V+A QG   +S   +E +F   L+S   +RE+G +LTAV++ GR+G+A+
Sbjct: 54  VTTLTSIFTGMVLALQGGNTISNILSEPMFVGTLVSFSLIRELGPVLTAVVVVGRAGAAV 113

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG+M++ E+IDA+ T+G + VR L+ PR++A ++++P+LT+ ANFS I G  +V   
Sbjct: 114 TAEIGTMQVTEQIDALYTLGTNPVRQLVLPRMFAFMLTVPILTLFANFSGIFGGYLVAVH 173

Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
              +P   +     +     +   G IK+ F A  +G V   +G      +  +G+  T 
Sbjct: 174 GLGVPDVTYLEDITNYMNTLDFMHGFIKSIFFAFMVGTVCCYKGLDTKGGAEGVGRSTTI 233

Query: 349 CVVQSISIVIIIDSLFAIFYFAIGI 373
            VV S+ +++++D        A GI
Sbjct: 234 AVVTSMVLILVLDYFLTAILTAFGI 258


>gi|121534945|ref|ZP_01666764.1| protein of unknown function DUF140 [Thermosinus carboxydivorans
           Nor1]
 gi|121306544|gb|EAX47467.1| protein of unknown function DUF140 [Thermosinus carboxydivorans
           Nor1]
          Length = 256

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 68/263 (25%), Positives = 124/263 (47%), Gaps = 9/263 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
              +   +G+ ++  +  +     +    I +   F          L   +RQ  ++GV 
Sbjct: 2   LIPMLEKLGRTVLVQLETTGRVILLFTETIYHLRRF---------NLKLTLRQAAHLGVD 52

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +P+V+L    TG V+  Q A +  ++GA+     ++++   RE+  +LT V+ AGR G+
Sbjct: 53  SLPIVLLTILFTGMVMTVQTAHEFIKYGAQSSVGGVVAVAMGRELAPVLTGVVAAGRVGA 112

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           AI AEIGSMK+ E+IDA+R M  + +  L+ PR+ A +  LP+L + A+     G  +V 
Sbjct: 113 AITAEIGSMKVTEQIDALRVMATNPIAYLVVPRLVACVFMLPILVVFADVIGTFGGYLVA 172

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
             Y  I    +         + ++  GLIKA      I I+   +G      +  +G+  
Sbjct: 173 TLYAGIGSFTYLHSIKVFTAINDVTGGLIKAMVFGAIIAIIGCYKGLTTDEGAEGVGRAT 232

Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369
           T  VV SI ++ + +   ++  +
Sbjct: 233 TGSVVASIILIFVTNYFLSLLLY 255


>gi|302328064|gb|ADL27265.1| putative ABC transporter, permease protein [Fibrobacter
           succinogenes subsp. succinogenes S85]
          Length = 364

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 81/353 (22%), Positives = 155/353 (43%), Gaps = 16/353 (4%)

Query: 21  SEIADDVVMAINKSIQSDSAIVDLSAITEIDT---IGAELIMYFMEKYHGKIKLQGVSTH 77
           +  +  ++ +   ++      +D S++  +D        L+    EK   K+ L+     
Sbjct: 24  AANSKKLLSSCKSALTKGELHLDGSSLASMDYSADAFFALLAELSEKTGNKLVLEHFPPE 83

Query: 78  IEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVIS 137
           I+Q    +    RK +  +KPQR        N+   +G      + +      +L L+ +
Sbjct: 84  IKQHLQNL----RKMVPPEKPQRE-----TNNILEMMGGAGFSLLKEV---FEVLVLLFT 131

Query: 138 NTGEFCASSY-KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE 196
                    + K K     + +QM+  G   + +  L   +    +A Q +  L+  G  
Sbjct: 132 AIYWTIVGPFDKGKIHFGGITKQMFKSGSEAMGICFLFVGLICLTMALQSSVMLNAVGGG 191

Query: 197 IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILI 256
            +    +  L   EIG LLT +++AGRSGSA+ AEI +M + EE+ A+++M +  V+ L+
Sbjct: 192 SYLASGLGFLIFAEIGPLLTTIILAGRSGSAMAAEIANMSVCEEVKALKSMAIPPVQYLV 251

Query: 257 SPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316
            PR  AL I+ P+L+  A+        ++ + + DI F+ +                 IK
Sbjct: 252 VPRFIALSITTPILSFSASIVGSFAGFLIAYFFCDISFSNYMMGLRDGIDPMTFLKSTIK 311

Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           A      + ++A  +G      + ++GK  T+ VV +I  ++I D+LFA  ++
Sbjct: 312 ALVFGWIVTLIACNKGLNAHGGAEAVGKATTSSVVAAICTIVISDTLFAFIFY 364


>gi|213966604|ref|ZP_03394755.1| membrane protein [Pseudomonas syringae pv. tomato T1]
 gi|301383114|ref|ZP_07231532.1| putative ABC transport system permease protein [Pseudomonas
           syringae pv. tomato Max13]
 gi|302058647|ref|ZP_07250188.1| putative ABC transport system permease protein [Pseudomonas
           syringae pv. tomato K40]
 gi|302133824|ref|ZP_07259814.1| putative ABC transport system permease protein [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|213928454|gb|EEB61998.1| membrane protein [Pseudomonas syringae pv. tomato T1]
 gi|330877179|gb|EGH11328.1| hypothetical protein PSYMP_16986 [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330964018|gb|EGH64278.1| hypothetical protein PSYAC_05120 [Pseudomonas syringae pv.
           actinidiae str. M302091]
 gi|331016694|gb|EGH96750.1| hypothetical protein PLA106_11700 [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 265

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 69/267 (25%), Positives = 138/267 (51%), Gaps = 8/267 (2%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
            S  +    +G+  +  +         L   +   G   +S          L++Q+Y VG
Sbjct: 4   KSLMDRVRLLGRSAIDIVAVLGRSGLFLVHALLGRGGAGSS-------FQLLVKQLYSVG 56

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
           V  + ++++     G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+
Sbjct: 57  VMSLVIIVVSGMFIGMVLALQGFSILAKYGSEQAVGQMVALTLLRELGPVVTALLFAGRA 116

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  ISLP+L ++ +   I GAS 
Sbjct: 117 GSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFSVVGIWGASW 176

Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           V   +  +    F+S   ++ +   ++  G+IK+   A  +  +A+ +G+     S  + 
Sbjct: 177 VAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCDPTSEGIS 236

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  T  VV +   V+ +D +     F 
Sbjct: 237 RATTKTVVYASLAVLGLDFILTALMFG 263


>gi|237798606|ref|ZP_04587067.1| hypothetical protein POR16_07195 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331021459|gb|EGI01516.1| hypothetical protein POR16_07195 [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 265

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 70/267 (26%), Positives = 138/267 (51%), Gaps = 8/267 (2%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
            S  +    +G+  +  +         L   +   G   +S          LI+Q+Y VG
Sbjct: 4   KSLMDRVRLLGRSAIDIVAVLGRSGLFLVHALLGRGGAGSS-------FQLLIKQLYSVG 56

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
           V  + ++++     G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+
Sbjct: 57  VMSLVIIVVSGVFIGMVLALQGFSILAKYGSEQAVGQMVALTLLRELGPVVTALLFAGRA 116

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  ISLP+L ++ +   I GAS 
Sbjct: 117 GSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFSVVGIWGASW 176

Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           V   +  +    F+S   ++ +   ++  G+IK+   A  +  +A+ +G+     S  + 
Sbjct: 177 VAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCDPTSEGIS 236

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  T  VV +   V+ +D +     F 
Sbjct: 237 RATTRTVVYASLAVLGLDFILTALMFG 263


>gi|329297311|ref|ZP_08254647.1| hypothetical protein Pstas_13477 [Plautia stali symbiont]
          Length = 260

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 121/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        +     G               F+     L++Q+Y VGV  + ++++  
Sbjct: 4   QALASLGRQGINTYAAFGRASLMLFHALVGKPAFRKHAPLLVKQLYSVGVLSLLIIVVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R ++SPR WA  IS+PLL ++     I G ++V   +  I   
Sbjct: 124 KATEQLSSMEMMAVDPLRRVVSPRFWAGFISMPLLALIFTAVGIAGGALVGVAWKGIDPG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +      ++   LIK+   A  +  +A+  G+     S  + +  T  VV + 
Sbjct: 184 FFWSTMQNAVDFRTDVINCLIKSAVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|146313264|ref|YP_001178338.1| hypothetical protein Ent638_3630 [Enterobacter sp. 638]
 gi|145320140|gb|ABP62287.1| protein of unknown function DUF140 [Enterobacter sp. 638]
          Length = 260

 Score =  230 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 75/255 (29%), Positives = 123/255 (48%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++I+   
Sbjct: 5   ALAALGHRGIKTIRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGL 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLTIL     I G S+V  ++  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTILFVAVGIWGGSLVGVQWKGIDAGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S       L  ++   LIK+   A  +  +A+  G+     S  + +  T  VV S  
Sbjct: 185 FWSAMQDAVDLRMDLVNCLIKSVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|16329621|ref|NP_440349.1| hypothetical protein slr1045 [Synechocystis sp. PCC 6803]
 gi|81670420|sp|P73009|Y1045_SYNY3 RecName: Full=Probable ABC transporter permease protein slr1045
 gi|1652104|dbj|BAA17029.1| slr1045 [Synechocystis sp. PCC 6803]
          Length = 263

 Score =  230 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 65/239 (27%), Positives = 113/239 (47%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           L      TG+      + +    + + QM  VG   + + ++ +   G V   Q A +  
Sbjct: 17  LVAAFFLTGQVFLHILQGRINRRNTLEQMNMVGPESMAIALITAGFVGMVFTIQVAREFI 76

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            +GA      ++S+   RE+  +LTAV+IAGR GSA  AEIG+M++ E++DA+  +  D 
Sbjct: 77  YYGATTTIGGVLSLSLTRELAPVLTAVVIAGRVGSAFAAEIGTMRVTEQLDALYMLRTDP 136

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           +  L+ PR+ A  + LP+LT L+ F  + G  ++    Y I   +F +   +   L ++F
Sbjct: 137 IDYLVVPRVIACGLMLPILTGLSLFVGMAGGLVISSSLYAINPTIFLNSVQNFTQLWDVF 196

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             L K+      I I+    G      +  +G+  TT VV S+  + I +   +   F 
Sbjct: 197 ACLFKSLVFGVIIAIIGCSWGLTTTGGAKGVGESTTTAVVTSLLAIFISNFFLSWLMFQ 255


>gi|114769304|ref|ZP_01446930.1| ABC transporter, inner membrane subunit [alpha proteobacterium
           HTCC2255]
 gi|114550221|gb|EAU53102.1| ABC transporter, inner membrane subunit [alpha proteobacterium
           HTCC2255]
          Length = 259

 Score =  230 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 60/254 (23%), Positives = 120/254 (47%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K +    +   +    +G ++           +   +   ++ Q+  +G   +PVV L +
Sbjct: 6   KLLRSIGSSVLAFCSSVGRIVIFALNAILHLVRPPFYGREVLSQLMQIGFYSLPVVGLTA 65

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
             TGA +A Q      +F AE     +++I  +RE+G +L  +M+AGR  S+I AE+G+M
Sbjct: 66  LFTGAALALQIYSGGVRFSAESVVPSIVAIGMVRELGPVLGGLMVAGRVSSSIAAELGTM 125

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           ++ E++DA+ T+  D ++ L++PR+ A  I++P+L  + +   I+G  +V          
Sbjct: 126 RVTEQLDALVTLSTDPMKYLVAPRVLAATIAMPILVAVGDTIGILGGYLVGTGRLGFNSN 185

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            +         L +I +GL KA      I ++    G+  G  +  +GK     VV +  
Sbjct: 186 NYLQNTVDFMELEDITSGLAKAAVFGFIIALMGCYHGYNSGRGAQGVGKATINAVVSASV 245

Query: 356 IVIIIDSLFAIFYF 369
           +++  + +    +F
Sbjct: 246 MILAANYVLTEAFF 259


>gi|149200416|ref|ZP_01877432.1| ABC-type transport system, permease component [Lentisphaera
           araneosa HTCC2155]
 gi|149136485|gb|EDM24922.1| ABC-type transport system, permease component [Lentisphaera
           araneosa HTCC2155]
          Length = 265

 Score =  230 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 78/265 (29%), Positives = 135/265 (50%), Gaps = 2/265 (0%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
            KNL    G+  V F  +S +    +G V         + +K K    S +  M   G  
Sbjct: 1   MKNLVSSFGRNFVGFFQESKNILAFIGEVTEELIFGIRNPHKIK--WKSTLYYMDGCGRE 58

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
              +V LI F+ G ++  Q A Q+ QFG +I+  +L+ +  ++E+G L+ A++  GR+GS
Sbjct: 59  ATGIVALICFLMGLILGFQSAVQMKQFGTDIYVANLVGLSIVKELGPLMVAMIATGRAGS 118

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A  AE+G+M++NEEIDA+ TMG    R LI P++ A+++ +P+LT++ +   I+G   V 
Sbjct: 119 AFAAELGTMRVNEEIDALTTMGFVPPRFLIIPKLIAMMVVMPILTLIGDLLGILGGFFVG 178

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
                +PF  + ++        ++   + KA   A  I +V    G      +  +GK  
Sbjct: 179 VVQLKLPFIAYLNQTIKAIHYLDVMESMAKAFAFAIIISMVGCYRGMNSSSDAQGVGKAA 238

Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371
           T+ VV  I ++I+ D+L  I +  +
Sbjct: 239 TSSVVSGIFLIIVADTLMTIIFTQL 263


>gi|313200036|ref|YP_004038694.1| hypothetical protein MPQ_0269 [Methylovorus sp. MP688]
 gi|312439352|gb|ADQ83458.1| conserved hypothetical protein [Methylovorus sp. MP688]
          Length = 259

 Score =  230 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 69/263 (26%), Positives = 133/263 (50%), Gaps = 8/263 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
              +   +G +I+  +    S A      +  +GE     +         IR++Y+ GV 
Sbjct: 1   MAEVLRGMGHRIIDRVWRLGSGARFFVYTLIYSGESFRRIH-------LTIREIYFTGVM 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++++ +F  G V+A QG   L ++G+      L+++  +RE+G ++TA++ AGR+G+
Sbjct: 54  SLLIILVSAFFVGMVLALQGYNTLQKYGSSEAIGVLVALSLVRELGPVVTALLFAGRAGT 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           AI AEIG MK  E++ A+  M +  +  +++PR WA ++S+PLL  L +   ++G  +V 
Sbjct: 114 AITAEIGLMKTTEQLSAMEMMAVSPIARVVAPRFWAGVVSMPLLAALFSMVGVLGGYLVA 173

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                +    F+S+  ++     +I  G+IK+     A  ++A+ EGF     +  + + 
Sbjct: 174 VPVIGVDNGAFWSQMQASVDFQADIVNGVIKSVVFGVACTMIALFEGFDAPPTAEGVSRA 233

Query: 346 VTTCVVQSISIVIIIDSLFAIFY 368
            T  VV S   V+ +D +   F 
Sbjct: 234 TTRTVVNSSLAVLGLDFILTSFM 256


>gi|317046704|ref|YP_004114352.1| hypothetical protein Pat9b_0470 [Pantoea sp. At-9b]
 gi|316948321|gb|ADU67796.1| protein of unknown function DUF140 [Pantoea sp. At-9b]
          Length = 260

 Score =  230 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 121/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        +     G               F+     L++Q+Y VGV  + ++++  
Sbjct: 4   QALASLGRQGINTCAAFGRAGMMLFHALVGKPAFRKHAPLLVKQLYSVGVMSLLIIMVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R ++SPR WA  IS+PLL ++     I G ++V   +  I   
Sbjct: 124 KATEQLSSMEMMAVDPLRRVVSPRFWAGFISMPLLALIFTAVGIAGGALVGVSWKGIDPG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +      +I   +IK+   A  +  +A+  G+     S  + +  T  VV + 
Sbjct: 184 FFWSAMQNAVDFRTDIINCIIKSAVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|237747263|ref|ZP_04577743.1| ABC transport system permease [Oxalobacter formigenes HOxBLS]
 gi|229378614|gb|EEO28705.1| ABC transport system permease [Oxalobacter formigenes HOxBLS]
          Length = 258

 Score =  230 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 67/265 (25%), Positives = 129/265 (48%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N   ++G K  K IND      I   +I    +              +  Q++++G  
Sbjct: 1   MSNFISNLGYKTRKSINDIGYATRIFLSLIRALPQVLKRP-------RLITDQIFFIGNK 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++ +     G V+  QG + L ++G+E     L+++   RE+G ++TA++ AGR+G+
Sbjct: 54  SLIIICVSGLFVGFVLGLQGYYILVRYGSEQALGVLVTLALTRELGPVVTALLYAGRAGT 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           ++ AEIG MK  E++ A+  M ++ V+ +++PR WA I+S+P+L  L + + +IG  IV 
Sbjct: 114 SLTAEIGLMKAGEQLAAMDMMAVNPVKRILAPRFWAGIVSMPILATLFSAAGVIGGYIVG 173

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                +    F+S+      +  +I  G+IK+     A+  +A+ +G+        +   
Sbjct: 174 VILIGVDDGAFWSQMQEGVDIWNDIGNGVIKSLVFGFAVTFMALFQGYESRPTPEGVSSA 233

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV S  +V+ +D +     F 
Sbjct: 234 TTRTVVYSSLLVLWLDFIMTALMFN 258


>gi|238789753|ref|ZP_04633535.1| hypothetical protein yfred0001_29030 [Yersinia frederiksenii ATCC
           33641]
 gi|238722112|gb|EEQ13770.1| hypothetical protein yfred0001_29030 [Yersinia frederiksenii ATCC
           33641]
          Length = 235

 Score =  230 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 69/233 (29%), Positives = 118/233 (50%), Gaps = 1/233 (0%)

Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198
                    + +     L++Q+Y VGV  + ++++     G V+  QG   L+ + AE  
Sbjct: 2   LFNALVGRPEPRKQWPLLLKQLYSVGVQSLLIIVVSGLFIGMVLGLQGFLILTTYSAEAS 61

Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258
              ++S+  LRE+G ++TA++ AGR+GSA+ AEIG MK  E+I ++  M +D +R +++P
Sbjct: 62  LGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQISSLEMMAIDPLRRVVAP 121

Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKA 317
           R WA +IS+PLLT +     I G S+V   +  I    F+S   S      ++   LIK+
Sbjct: 122 RFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDGGFFWSAMQSAVEWRTDLLNCLIKS 181

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
              A  +  +A+  G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 182 LVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 234


>gi|170728557|ref|YP_001762583.1| hypothetical protein Swoo_4232 [Shewanella woodyi ATCC 51908]
 gi|169813904|gb|ACA88488.1| protein of unknown function DUF140 [Shewanella woodyi ATCC 51908]
          Length = 260

 Score =  230 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 77/255 (30%), Positives = 127/255 (49%), Gaps = 2/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           ++      +       G          A   + KGF L  ++Q+Y VGV  + ++ +   
Sbjct: 6   RVANLGRAAIELVIGFGSAGLMLWGAIARKPRAKGFPL-FVKQLYVVGVQSMVLIFVSGL 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L  FG E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 65  FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +I+PR WA ++SLPLL ++     I G  IV  ++  I    
Sbjct: 125 STEQLSSLEMMAIDPLRQIIAPRFWAGVVSLPLLALIFTAVGIYGGHIVGVEWKGIDSGS 184

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++     +I   LIK+   A  +  +A+  G+ V  +   + K  T  VVQS  
Sbjct: 185 FWSILQASVEWRQDIVNCLIKSLVFAVVVTWIALYRGYQVIPNPEGISKATTQTVVQSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D L     F 
Sbjct: 245 AVLALDFLLTALMFG 259


>gi|77918062|ref|YP_355877.1| toluene export protein [Pelobacter carbinolicus DSM 2380]
 gi|77544145|gb|ABA87707.1| ABC-type toluene export protein [Pelobacter carbinolicus DSM 2380]
          Length = 269

 Score =  230 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 66/266 (24%), Positives = 130/266 (48%), Gaps = 6/266 (2%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           L   +G+   K   +        G +         S  +       ++RQ++++G     
Sbjct: 4   LVQAVGRFFQKLGAEFIFYLEQAGRMGIFLAACLFSVVRPPYKFGPILRQIHFIGSRSSF 63

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V++     TG V+A QG + L +FG+E      +++  +RE+G ++ A+M+ GR+GSAI 
Sbjct: 64  VILFTGSFTGMVLALQGYYTLRKFGSEGLLGAAVALSLIRELGPVIAALMVVGRAGSAIC 123

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AE+G M+ +E+IDA+  M +D  + L++P+  A I+S+PLLT + + + I+G  +V    
Sbjct: 124 AEVGIMRNSEQIDALECMAIDPYKYLMAPKFVAGILSMPLLTAIFDMAGIVGGYLVGVAM 183

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV------GVHSNSLG 343
             +    +F + +S+    ++  GL+K+      I  +   +G+ +      G  +  + 
Sbjct: 184 LGVNKGAYFQQMYSSVVWNDVEMGLVKSLIFGLLIIWIGAAKGYYLHLERSGGFGAEGVS 243

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYF 369
           +  T  VV S   +++ D L +    
Sbjct: 244 RVTTDAVVLSSVAILVWDYLLSAIML 269


>gi|254468843|ref|ZP_05082249.1| ABC-type transporter, permease component involved in toluene
           tolerance [beta proteobacterium KB13]
 gi|207087653|gb|EDZ64936.1| ABC-type transporter, permease component involved in toluene
           tolerance [beta proteobacterium KB13]
          Length = 259

 Score =  230 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 70/266 (26%), Positives = 130/266 (48%), Gaps = 8/266 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N    IG  I   I    +   +   +IS + +               IR++Y+ GV 
Sbjct: 1   MLNFFEKIGGAIRSKITRLGAATRLFFSIISYSSDSFKR-------FNLTIREIYFTGVL 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++++ +F  G V+  QG + L ++G+      L+++  +RE+G ++TA++ AGR+G+
Sbjct: 54  SLVIIVVSAFFVGMVLGLQGYYTLQKYGSSEAIGVLVALALVRELGPVVTALLFAGRAGT 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           AI AEIG MK  E++ A+  M +  +  +++PR WA II++PLL  + +   I+G  +V 
Sbjct: 114 AITAEIGLMKATEQLSAMEMMAVSPIARIVAPRFWAGIITMPLLASIFSMVGILGGYVVA 173

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                +    F+S+  +      +I  G IK+     A  I+A+ EG+     +  + + 
Sbjct: 174 VPMIGVDEGAFWSQMQANVDFNYDIVNGFIKSVVFGIACTIIALFEGYDAPPTAEGVSRA 233

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAI 371
            T  VV S   V+ +D +   F   +
Sbjct: 234 TTRTVVTSSLAVLGLDFVLTSFMLTV 259


>gi|39996998|ref|NP_952949.1| transporter [Geobacter sulfurreducens PCA]
 gi|39983886|gb|AAR35276.1| transporter, putative [Geobacter sulfurreducens PCA]
 gi|298506015|gb|ADI84738.1| transporter membrane protein of unknown function DUF140 [Geobacter
           sulfurreducens KN400]
          Length = 257

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 73/263 (27%), Positives = 132/263 (50%), Gaps = 9/263 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
            +   +GKK++ F         +LG ++   G       +    L S+  QM  +G   V
Sbjct: 2   GMFDRVGKKVLSFHE-------VLGEMLMLLGRTVWFFREAPRNLPSIFNQMAIIGYETV 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
           P+  +++F  G V+A Q   +L ++G +     ++ +  +RE+G ++T+ ++AGR GSA+
Sbjct: 55  PIASVMAFFVGMVLALQTGVELQKYGTQNIIGGIVGLSMVRELGPVMTSFLVAGRVGSAM 114

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG MK+ EEIDA++T+ ++ VR L  PR+ A ++ +P L I AN   I+G +I+   
Sbjct: 115 AAEIGVMKVYEEIDALKTLDINPVRYLAMPRLIACLVCVPALVIFANAVGIVGGAIMSHL 174

Query: 289 Y--YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
           +    I ++ ++    +   L  +  GL+KA      I +VA   GF     +  + +  
Sbjct: 175 HPKIFISYSTYYDSLKTALKLKEVGAGLVKATVFGGIIALVACYTGFKTSGGARGIAQAT 234

Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369
           T  VV S  ++++ D        
Sbjct: 235 TRAVVLSFMLILVADYFLTRILM 257


>gi|145640771|ref|ZP_01796354.1| hypothetical protein CGSHiR3021_06880 [Haemophilus influenzae
           R3021]
 gi|319776661|ref|YP_004139149.1| ABC transporter permease [Haemophilus influenzae F3047]
 gi|329124179|ref|ZP_08252726.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Haemophilus aegyptius
           ATCC 11116]
 gi|145274697|gb|EDK14560.1| hypothetical protein CGSHiR3021_06880 [Haemophilus influenzae
           22.4-21]
 gi|317451252|emb|CBY87486.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae F3047]
 gi|327467604|gb|EGF13102.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Haemophilus aegyptius
           ATCC 11116]
          Length = 261

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 78/267 (29%), Positives = 136/267 (50%), Gaps = 8/267 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N    +GK+++ F         +L       G       + +     L++QM+ +GV 
Sbjct: 2   IVNFISALGKQVIDFFRALGRAGFML------FGALIGKP-QIRKHFPLLVKQMHVLGVQ 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + +++L     G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GS
Sbjct: 55  SLLIILLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGS 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+P+L+IL     I G S+V 
Sbjct: 115 ALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPVLSILFIAIGIWGGSLVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
             +  +    F+S   ++ + + +I  G IKA F A A+  +A+  G+     S  + + 
Sbjct: 175 VDWKGVDSGSFWSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYDCMPTSEGISQA 234

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAIG 372
            T  VV +  +V+ +D +     F  G
Sbjct: 235 TTRTVVHASLVVLGLDFILTAIMFGAG 261


>gi|330958007|gb|EGH58267.1| hypothetical protein PMA4326_05446 [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 265

 Score =  230 bits (587), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 69/269 (25%), Positives = 138/269 (51%), Gaps = 8/269 (2%)

Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162
              S  +    +G+  +  +         L   +   G   +S          L++Q+Y 
Sbjct: 2   RKKSLMDRVALLGRSAIDIVAVLGRSGLFLVHALLGRGGAGSS-------FQLLVKQLYS 54

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           VGV  + ++++     G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AG
Sbjct: 55  VGVMSLVIIVVSGIFIGMVLALQGFSILAKYGSEQAVGQMVALTLLRELGPVVTALLFAG 114

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           R+GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  ISLP+L ++ +   I GA
Sbjct: 115 RAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFSVVGIWGA 174

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341
           S V   +  +    F+S   ++ +   ++  G+IK+   A  +  +A+ +G+     S  
Sbjct: 175 SWVAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCDPTSEG 234

Query: 342 LGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           + +  T  VV +   V+ +D +     F 
Sbjct: 235 ISRATTKTVVYASLAVLGLDFILTALMFG 263


>gi|308051140|ref|YP_003914706.1| hypothetical protein Fbal_3434 [Ferrimonas balearica DSM 9799]
 gi|307633330|gb|ADN77632.1| protein of unknown function DUF140 [Ferrimonas balearica DSM 9799]
          Length = 260

 Score =  230 bits (587), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 127/256 (49%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           ++I +  + +      LG              +    L  LI+Q+Y VGV  + ++++  
Sbjct: 4   ERIRRLGSGALKWVAGLGRAGLMLVGALVRRPQPGKMLPLLIKQLYQVGVLSMVIILVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L  FG E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYIILVDFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D ++ +I+PR WA +IS+PLL ++     I G  +V  ++  I   
Sbjct: 124 KATEQLASMEMMAVDPLQRVIAPRFWAGVISMPLLALMFTTIGIWGGHLVGVEWKGIDPG 183

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   ++     +I   LIK+   A  +  +A+ +G+     +  + +  T  VV + 
Sbjct: 184 AFWSILTASVEWQKDILNCLIKSVVFAFVVTWIALFKGYDAVPTAEGISRATTETVVHAS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLALDFVLTAVMFG 259


>gi|242241047|ref|YP_002989228.1| hypothetical protein Dd703_3649 [Dickeya dadantii Ech703]
 gi|242133104|gb|ACS87406.1| protein of unknown function DUF140 [Dickeya dadantii Ech703]
          Length = 260

 Score =  230 bits (587), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 68/256 (26%), Positives = 120/256 (46%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        S     G              +       L RQ+Y VGV  + ++I+  
Sbjct: 4   QALASLGRSGISTCASFGRAGLMLFNALVGKPEPAKQWPLLARQLYSVGVQSLLIIIVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  CFIGMVLGLQGYIVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +++PR WA  IS+PLLT++     I G ++V   +  I   
Sbjct: 124 KATEQLSSMEMMAVDPLRRVVAPRFWAGFISMPLLTLIFVAVGIWGGALVGVDWKGIDSG 183

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S          ++   ++K+ F A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQGAVEWRHDVMNCVLKSLFFAMTVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|154253915|ref|YP_001414739.1| hypothetical protein Plav_3483 [Parvibaculum lavamentivorans DS-1]
 gi|154157865|gb|ABS65082.1| protein of unknown function DUF140 [Parvibaculum lavamentivorans
           DS-1]
          Length = 257

 Score =  230 bits (587), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 69/262 (26%), Positives = 129/262 (49%), Gaps = 7/262 (2%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    IG+ ++  + +    +  + L +S+         +   F     +QM  +G   +
Sbjct: 2   NFFAVIGRVVLALLGEIGRLSLFVWLSVSHI-------LRPPFFWRLTAQQMLRIGYFSL 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
           PVV L +F TG  +A Q  +  + F +E     ++++   RE+G +L  +M+AGR  +AI
Sbjct: 55  PVVALTAFFTGGALALQIYYGGNSFNSESIVATIVALGITRELGPVLGGLMVAGRVSAAI 114

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AE+G+M++ E+IDA+ T+  +  + L+ PR+ A +I+LPLL ++A+   I+G  +V   
Sbjct: 115 AAELGTMRVTEQIDALTTLSTNPHKYLVVPRVVAAVITLPLLVLVADIIGIMGGYVVGTA 174

Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             D    V+         L ++ +GLIKA      I ++    GF     +  +G+  T 
Sbjct: 175 SLDFNGGVYIKNTADFLKLDDVTSGLIKAAVFGFIIAVMGCFHGFNSKGGAQGVGRATTN 234

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +  +++  + +     FA
Sbjct: 235 AVVTASILILAANYVMTSLLFA 256


>gi|255658873|ref|ZP_05404282.1| toluene tolerance ABC efflux transporter, permease [Mitsuokella
           multacida DSM 20544]
 gi|260848821|gb|EEX68828.1| toluene tolerance ABC efflux transporter, permease [Mitsuokella
           multacida DSM 20544]
          Length = 256

 Score =  230 bits (587), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 73/263 (27%), Positives = 131/263 (49%), Gaps = 8/263 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
              +   IG  +++   +  +   + G  +           + K  L  ++ QM ++GV 
Sbjct: 2   LLRILSTIGAFVLRRFEELGTIVLLYGETLRAL--------RHKPRLRHILAQMSHLGVD 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + +V L    TG VI+ Q A  L +FGA+     +++I   RE+G +L AV+ AGR GS
Sbjct: 54  SLMIVSLTLLFTGVVISLQTADVLIRFGAQGTLGGIVTIAIGRELGPVLVAVVCAGRVGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           AI AEI +MK+ E+IDA+R M +  V  L+ PR+ A +I +P+LT+  +   + G  ++ 
Sbjct: 114 AITAEIATMKVTEQIDALRVMAVSPVDYLLVPRMLACMIVVPILTVFGDVIGVFGGWLIA 173

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
             Y  +    + +  H  A L ++  G+IKA F    I ++    G      +  +G+  
Sbjct: 174 VFYKGLTTYSYMNSIHIFADLFDMTGGVIKAIFFGNVIAVLGCYYGLHCPDGAEGVGRAT 233

Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369
           T  VV SI ++ +++++     +
Sbjct: 234 TKTVVASIIVIFLLNAVLTFLLY 256


>gi|84387816|ref|ZP_00990831.1| putative ABC superfamily transport protein [Vibrio splendidus
           12B01]
 gi|84377331|gb|EAP94199.1| putative ABC superfamily transport protein [Vibrio splendidus
           12B01]
          Length = 259

 Score =  230 bits (587), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 74/256 (28%), Positives = 126/256 (49%), Gaps = 2/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K I      + +     G              + K F L  ++Q+Y VGV  + ++++  
Sbjct: 4   KAIAGVGKRTLAICESFGRASLMLFGALFGIPRLKNFPL-FVKQLYSVGVQSLAIILVSG 62

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 63  LFIGMVLSLQGYVVLIDYGAEGNLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 122

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D ++ +I+PR+WA +IS+PLL ++     I GA +V   +  I   
Sbjct: 123 KATEQISSLEMMAVDPLKRIIAPRLWAGLISMPLLAMIFMAVGIWGAQLVGVDWKGIDHG 182

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   S+  L  +I    IK    A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 183 SFWSAMQSSVELGRDIGNSTIKCMVFAITVTWIALFNGYDAVPTSEGISQATTRTVVHSS 242

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 243 LAVLGLDFVLTALMFG 258


>gi|222054639|ref|YP_002537001.1| protein of unknown function DUF140 [Geobacter sp. FRC-32]
 gi|221563928|gb|ACM19900.1| protein of unknown function DUF140 [Geobacter sp. FRC-32]
          Length = 258

 Score =  230 bits (587), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 71/265 (26%), Positives = 129/265 (48%), Gaps = 9/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
                  IG+K++KF         +LG  +    E           L S+  QM  +G  
Sbjct: 1   MAGAIDRIGRKVIKFHEIIGEMLILLGQTVYFFREA-------PRNLASIFAQMAIIGYE 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PV  +++F  G V+A Q   +L+++G++     ++    +RE+G ++T+ ++AGR GS
Sbjct: 54  TLPVASVMAFFVGMVLALQTGVELNKYGSQDIIGAIVGHSMVRELGPVMTSFLVAGRVGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AE+G MK+ EEIDA++T+ ++ VR L  PR  A I+ +P L I ++   I+G +I+ 
Sbjct: 114 AMAAELGVMKVYEEIDALKTLDINPVRYLAMPRFIACIVCVPALVIYSDCIGIVGGAIIS 173

Query: 287 WKY--YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
             +    + ++ ++    +      I  GLIKA      + +V+   GF     +  +G 
Sbjct: 174 NLHPKIFVSYSTYYDSLTAALKFQEIGNGLIKAFVFGAIVALVSCYVGFKTSGGARGIGI 233

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYF 369
             T  VV S  ++++ D        
Sbjct: 234 STTRSVVWSFMLILVADYFLTRLLM 258


>gi|74313731|ref|YP_312150.1| hypothetical protein SSON_3342 [Shigella sonnei Ss046]
 gi|73857208|gb|AAZ89915.1| conserved hypothetical protein [Shigella sonnei Ss046]
          Length = 260

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++++   
Sbjct: 5   ALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGV 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLT++     I G S+V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGIWGGSLVGVSWKGIDSGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   +      ++   LIK+   A  +  +++  G+     S  + +  T  VV S  
Sbjct: 185 FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDTIPTSAGISRATTRTVVHSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|320174559|gb|EFW49695.1| Uncharacterized ABC transporter, permease component YrbE [Shigella
           dysenteriae CDC 74-1112]
          Length = 260

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++++   
Sbjct: 5   ALASLGHKGIKTLRTFGRTGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGV 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLT++     I G S+V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGIWGGSLVGVSWKGIDSGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   +      ++   LIK+   A  +  +++  G+     S  + +  T  VV S  
Sbjct: 185 FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|16273014|ref|NP_439243.1| ABC transporter permease [Haemophilus influenzae Rd KW20]
 gi|260580171|ref|ZP_05848001.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
 gi|1176838|sp|P45030|Y1086_HAEIN RecName: Full=Probable ABC transporter permease protein HI_1086
 gi|1574640|gb|AAC22742.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
 gi|260093455|gb|EEW77388.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
          Length = 261

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 78/267 (29%), Positives = 136/267 (50%), Gaps = 8/267 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N    +GK+++ F         +L       G       + +     L++QM+ +GV 
Sbjct: 2   IVNFISALGKQVIDFFRALGRAGFML------FGALIGKP-QIRKHFPLLVKQMHVLGVQ 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + +++L     G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GS
Sbjct: 55  SLLIILLSGLFIGMVLGLQGYVVLIDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGS 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+P+L+IL     I G S+V 
Sbjct: 115 ALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPVLSILFIAIGIWGGSLVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
             +  +    F+S   ++ + + +I  G IKA F A A+  +A+  G+     S  + + 
Sbjct: 175 VDWKGVDSGSFWSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYDCMPTSEGISQA 234

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAIG 372
            T  VV +  +V+ +D +     F  G
Sbjct: 235 TTRTVVHASLVVLGLDFILTAIMFGAG 261


>gi|74317917|ref|YP_315657.1| hypothetical protein Tbd_1899 [Thiobacillus denitrificans ATCC
           25259]
 gi|74057412|gb|AAZ97852.1| Protein of unknown function DUF140 [Thiobacillus denitrificans ATCC
           25259]
          Length = 262

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 66/264 (25%), Positives = 126/264 (47%), Gaps = 8/264 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
            +    ++G + +  +             + ++G                +R++Y+ GV 
Sbjct: 2   LRQAIENLGARTIDAVWRIGFATRFFAATLLHSGTAFRR-------FGLTVRELYFTGVL 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++++     G V+  QG   L  +G+E     L+++  +RE+G ++ A++ A R+GS
Sbjct: 55  SLIIILVSGLFVGMVLGLQGYETLQTYGSEEALGILVALSLVRELGPVVAALLFASRAGS 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           AI AEIG MK  E++ A+  M +D +  +++PR WA +IS+PLL  L +   + G  +V 
Sbjct: 115 AITAEIGLMKATEQLSAMEMMAVDPIARVVAPRFWAGVISMPLLAALFSAMGVFGGYLVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
            +   +    F+S+  S      +I  G+IK+     AI  +A+ EG+     +  + + 
Sbjct: 175 VQLIGVDEGAFWSQMQSAVDFEQDILNGVIKSVVFGVAITAIALFEGYDAPPTAEGVSRA 234

Query: 346 VTTCVVQSISIVIIIDSLFAIFYF 369
            T  VV S   V+ +D +   F F
Sbjct: 235 TTRTVVTSSLAVLALDFVLTAFMF 258


>gi|23014157|ref|ZP_00053989.1| COG0767: ABC-type transport system involved in resistance to
           organic solvents, permease component [Magnetospirillum
           magnetotacticum MS-1]
          Length = 258

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 122/264 (46%), Gaps = 7/264 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             +    IG+  + F+      +    + +S+T       +  +  L   +     +G  
Sbjct: 1   MTSFLATIGRVFLAFLAHVGRLSAFTAMAVSHT---VRPPFYPRLILREFVE----IGYF 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PVV L +  TG V+A Q     S+F AE     ++ +   RE+  +L  +M+AGR G+
Sbjct: 54  SLPVVGLTAVFTGMVLALQSYSGFSRFAAEGAVATVVVLSVTRELAPVLAGLMVAGRIGA 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           ++ AEIG+M++ E+IDA+ T+  +  + L++PRI A  + LP L ++A+   + G  IV 
Sbjct: 114 SMAAEIGTMRVTEQIDALTTLSTNPFKYLVAPRILAGTLMLPFLVLIADIIGVFGGYIVG 173

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
                   A + +R        ++ +GL KA      I ++    G+     +  +G   
Sbjct: 174 VYKLGFNSATYIARTWEFLEPLDVISGLTKAAVFGFLITLMGCYNGYYSKGGAQGVGAAT 233

Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370
           T  VV +  ++++ + +    +F 
Sbjct: 234 TNAVVSAAIMILVFNYIITAMFFG 257


>gi|108762257|ref|YP_631903.1| putative ABC transporter permease [Myxococcus xanthus DK 1622]
 gi|108466137|gb|ABF91322.1| putative ABC transporter, permease protein [Myxococcus xanthus DK
           1622]
          Length = 271

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 69/254 (27%), Positives = 125/254 (49%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + + +F          LG +I+   +    S +    L++L  Q+ +VGV  + +V L  
Sbjct: 18  QAVTRFGQGLIDIVSTLGGIITMGLDVFRWSVRRPFRLVNLFAQLDFVGVGSIFIVSLTG 77

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
             TG V A Q +     F AE      +++   RE+  + +A+M+  R+GSA+  E+G+M
Sbjct: 78  TFTGMVFALQTSTAFQLFDAESLVGPTVALTLTRELAAVFSALMVTMRAGSAMCTELGTM 137

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           ++ E++DA+ TM ++ V+ L+ PR+ A +  +P LT+L N   + GA +V      I   
Sbjct: 138 RVTEQVDALETMAVNPVQYLLVPRVLAGLFMVPALTMLFNTMGMGGAYVVAVGGLGISPG 197

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            F SR        +IF GL+K      ++ ++   +GF     +  +G+  T  +V S  
Sbjct: 198 TFLSRTQQWLAPEDIFQGLLKGAVFGLSVSLICCFKGFNASGGAKGVGQATTEAMVASAL 257

Query: 356 IVIIIDSLFAIFYF 369
            + I+D +  I +F
Sbjct: 258 SIFILDFILGILFF 271


>gi|197120798|ref|YP_002132749.1| hypothetical protein AnaeK_0378 [Anaeromyxobacter sp. K]
 gi|196170647|gb|ACG71620.1| protein of unknown function DUF140 [Anaeromyxobacter sp. K]
          Length = 370

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 90/367 (24%), Positives = 159/367 (43%), Gaps = 14/367 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
              +G W    ++ +   +        +  + ++D S +  +DT GA L+          
Sbjct: 16  VHCSGAWTVHLVAGLDRALRRLAWP--EHVAVVIDASGVAAMDTAGAWLLRRAARDLERG 73

Query: 69  IKLQGVS--THIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
            +   ++     E L +L++ +                         +G+          
Sbjct: 74  GRPVTLTLRPEHEALLALVTSSGEVAP--------RRARERARFLSELGRSAWSSALAIG 125

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
               ++G +        A   + +      +  +   G   +P   L+SF  G V+A QG
Sbjct: 126 GVLTLVGELAGRVARARAGPLRVRA--RQAVLHVQSAGFEALPTTALLSFFVGVVLASQG 183

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A  L  FGA I   DL+ +  LRE+  L+TA+++AGRSGSA  A+IG+MK+  EI+++R 
Sbjct: 184 ATLLRPFGAGILIADLVGLAMLRELSPLVTAIVVAGRSGSAYAAQIGAMKMAGEIESLRA 243

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
            G+  V  L+ PRI AL + +PLLT+ A+   + GA++V      +    F  R      
Sbjct: 244 GGVSPVDALVVPRIAALALVVPLLTVAADVLGLAGATLVARAELGMHAPEFLGRVAREVH 303

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
            ++   G+ KAP     +  V   +G      + S+G++ T  VVQS+ +V++ D L  +
Sbjct: 304 ASSYLLGVAKAPVFGVIVAAVGCHQGLRASDDAGSVGRRTTGAVVQSMFLVVLADGLVLV 363

Query: 367 FYFAIGI 373
               +GI
Sbjct: 364 VSRQLGI 370


>gi|27363501|ref|NP_759029.1| putative ABC transport system permease [Vibrio vulnificus CMCP6]
 gi|27359617|gb|AAO08556.1| Putative ABC transport system permease protein [Vibrio vulnificus
           CMCP6]
          Length = 357

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 96/356 (26%), Positives = 166/356 (46%), Gaps = 17/356 (4%)

Query: 16  KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG---KIKLQ 72
            S  +  + +     ++    S + +V+   +T ID  G   +     ++     +I + 
Sbjct: 15  TSEIVGNLWEKANRILDTHPNS-AIVVNAHNLTFIDISGIAFLSDLQTRFRAPGAEISIV 73

Query: 73  GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHIL 132
           G+   + +L                          +     +G+   + + D  S A  +
Sbjct: 74  GLKPSLAELV----------PPAPVENNPSIVGRERGFFERVGRATKEMLIDVGSVARFV 123

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
                        S +      ++       G   VP+++LI F+ G +IA +      Q
Sbjct: 124 KDC--AVVFKIGISRRKNVNWATVSDIASRAGADAVPIIMLIGFLMGVIIAFEIGLVAEQ 181

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
           FGA +F  D + I  LRE+G L+TA++ AGR+G+A  AEIG+ K+NEEI+A+RT G+  V
Sbjct: 182 FGAVLFVADGIGISMLRELGPLMTAIVFAGRTGAAFAAEIGTQKVNEEINALRTFGISPV 241

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
             L+ PRI+A I+ LPLLT+ A+   + G ++V+ K+ DI F  ++ +  S  ++ +   
Sbjct: 242 EFLVIPRIYASILVLPLLTVFADIIGVFGGALVLLKF-DISFVQYYHQLLSALSIWDFGF 300

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           GLIKA      I ++  + G A G  S S+G   T+ VV SI  +++ID  F +  
Sbjct: 301 GLIKATTFGFIIAVIGCERGLATGQGSTSVGLAATSAVVSSIIWIVVIDGFFTVLL 356


>gi|260596176|ref|YP_003208747.1| hypothetical protein CTU_03840 [Cronobacter turicensis z3032]
 gi|260215353|emb|CBA27350.1| UPF0393 inner membrane protein yrbE [Cronobacter turicensis z3032]
          Length = 262

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 77/265 (29%), Positives = 131/265 (49%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             NL   +G++ +KF       +   G              +F+     L+RQ+Y+VGV 
Sbjct: 4   LLNLLASMGQRGLKF-------SASFGRAGLMLFNAIVGKPEFRKHGPLLVRQLYHVGVL 56

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++I+     G V+  QG   L+ +GAE     L+++  LRE+G ++ A++ AGR+GS
Sbjct: 57  SMIIIIVSGLFIGMVLGLQGYLVLTTYGAETSLGMLVALSLLRELGPVVAALLFAGRAGS 116

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++ ++  M +D +R +ISPR WA +ISLPLLT++     + G S+V 
Sbjct: 117 ALTAEIGLMKATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGVWGGSLVG 176

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
             +  I    F+S          ++   LIK+   A  +  +A+  G+     S  + + 
Sbjct: 177 VNWKGIDAGFFWSAMQDAVDWRMDLINCLIKSVVFAITVTWIALFNGYDAIPTSAGISRA 236

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV +   V+ +D +     F 
Sbjct: 237 TTRTVVHASLAVLGLDFVLTALMFG 261


>gi|320103291|ref|YP_004178882.1| hypothetical protein Isop_1750 [Isosphaera pallida ATCC 43644]
 gi|319750573|gb|ADV62333.1| protein of unknown function DUF140 [Isosphaera pallida ATCC 43644]
          Length = 280

 Score =  230 bits (586), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 64/252 (25%), Positives = 124/252 (49%), Gaps = 7/252 (2%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170
              +G++I+  +++  S         +  G   A   +       L+   + +GV  +PV
Sbjct: 15  LTRVGERIITMVSEFGSWVQF---SAATLGWMVARPPR----RSHLVPNFFTIGVRSLPV 67

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           V +     G V++ Q      + G E     +++I  ++E+G +L A M+AGR GSA+ A
Sbjct: 68  VAVTGLFIGMVLSVQSFNSFKEMGLETRLGSVVNISLVKELGPVLAATMLAGRVGSAMAA 127

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           E+G+M++ E+IDA+  +G++ +  L+ PR  A ++ +P LT++A+F+  +G S V  K  
Sbjct: 128 ELGTMRVTEQIDALHALGVNPIAYLVVPRFLACVVLIPALTLVADFAGALGGSFVSVKML 187

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
            +    ++    S     ++  GL K+ F   AI +++   GF     +  +G+  T   
Sbjct: 188 GVDGYYYWKHSQSFVEPLDVVAGLFKSVFFGAAIALISCHRGFHSKGGAEGVGQAATEAF 247

Query: 351 VQSISIVIIIDS 362
           V S   ++ +D 
Sbjct: 248 VSSFIAILFLDF 259


>gi|212633565|ref|YP_002310090.1| hypothetical protein swp_0685 [Shewanella piezotolerans WP3]
 gi|212555049|gb|ACJ27503.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
          Length = 235

 Score =  230 bits (586), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 72/230 (31%), Positives = 121/230 (52%), Gaps = 1/230 (0%)

Query: 142 FCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSID 201
             A   + K  L  L +Q+Y +GV  + ++++     G V+A QG   L  FG E     
Sbjct: 5   AIAHRPRLKKGLPLLTKQLYVIGVQSMVIILVSGLFIGMVLALQGYNILVGFGTEESLGP 64

Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261
           ++++  LRE+G ++TA++ AGR+GSA+ AE+  MK  E++ ++  M +D +R +I+PR W
Sbjct: 65  MVALSLLRELGPVVTALLFAGRAGSALTAELALMKSTEQLSSLEMMAVDPLRQIIAPRFW 124

Query: 262 ALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFM 320
           A +ISLPLL ++     I G  IV  ++  I    F+S   S+     +I   +IK+   
Sbjct: 125 AGVISLPLLALMFTAIGIYGGHIVGVEWKGIDSGAFWSILQSSVEWRQDIVNCMIKSLLF 184

Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           A  +  +A+  G+ V  +   + +  T  VVQS   V+ +D L     F 
Sbjct: 185 AVVVTWIALYRGYHVIPNPEGISRATTQTVVQSSLAVLALDFLLTAMMFG 234


>gi|78485324|ref|YP_391249.1| hypothetical protein Tcr_0980 [Thiomicrospira crunogena XCL-2]
 gi|78363610|gb|ABB41575.1| ATP-binding cassette (ABC) superfamily transporter, permease
           component [Thiomicrospira crunogena XCL-2]
          Length = 261

 Score =  230 bits (586), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 64/266 (24%), Positives = 126/266 (47%), Gaps = 8/266 (3%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
           N        +G+  ++        A  +  ++                L  L++Q+Y+ G
Sbjct: 2   NPLFRFLASLGESALRLFTSFGRGAIFILSLLPALPYSILR-------LDLLVKQVYFSG 54

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
           V  +P+++      G V++ QG   L  + +E     + ++  LRE+G ++ A++ AGR+
Sbjct: 55  VLSLPIILTAGLFVGMVLSLQGYNVLVDYNSEEAVGTMTALSLLRELGPVVAALLFAGRA 114

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           GSA+ AEIG M+  E++ A+  M +D ++ + SPR  A +I LP+L+++     I G  I
Sbjct: 115 GSALTAEIGLMRSTEQLSALEMMAIDPLKFVFSPRFTAALIVLPMLSLMFIAMGIFGGYI 174

Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           V   +  +    F+++ +       ++  G+IK+   A  I I+++ +G+     S  + 
Sbjct: 175 VGVGWLGVDEGAFWTQMNEHVDWNEDVVNGIIKSIAFAVLIAIISLFQGYDAIPTSEGVS 234

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYF 369
           +  T  VV S   V+ +D +     F
Sbjct: 235 RATTRTVVHSSLGVLGLDFILTAIMF 260


>gi|317152440|ref|YP_004120488.1| hypothetical protein Daes_0725 [Desulfovibrio aespoeensis Aspo-2]
 gi|316942691|gb|ADU61742.1| protein of unknown function DUF140 [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 268

 Score =  230 bits (586), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 72/253 (28%), Positives = 124/253 (49%), Gaps = 5/253 (1%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                     LG +        A  +   G     +RQ+Y++GV  V V+ LI   TG V
Sbjct: 16  GRMFGRVLDELGGMFLFFLSAVALMFAGWGQFSKTVRQIYFIGVQSVTVIALIGLFTGMV 75

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +  Q  + LS FGA+ F    +++  +RE+  +L A+M+ GR+GSA+ AEIG M+I+E+I
Sbjct: 76  MGMQLYYALSVFGADGFLGTGVALSMVRELAPVLAAIMLTGRAGSAMTAEIGVMRISEQI 135

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  MG++ +R L++P++ A +IS P+L    N  A+ G  +   K       V+++R 
Sbjct: 136 DALTIMGINPMRYLVAPKMAACLISFPILNAFFNLIALWGGWLTGVKLLGANEGVYWARV 195

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCVVQSISI 356
             +   ++I  G IK+   A  +  +   EG+             + +  T  VV+S  I
Sbjct: 196 QGSLDWSDIQGGFIKSMVFAVLVCTICCFEGYYTHTRSGHAGPEGVSQSTTNAVVKSCVI 255

Query: 357 VIIIDSLFAIFYF 369
           ++  D +     +
Sbjct: 256 ILAADYVLTSLLW 268


>gi|319954485|ref|YP_004165752.1| hypothetical protein Celal_2978 [Cellulophaga algicola DSM 14237]
 gi|319423145|gb|ADV50254.1| protein of unknown function DUF140 [Cellulophaga algicola DSM
           14237]
          Length = 258

 Score =  230 bits (586), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 65/250 (26%), Positives = 129/250 (51%), Gaps = 3/250 (1%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G +   +G F   + +        +RQ Y +G   + +V++  F+ G V+  
Sbjct: 9   IKQALTEIGELTYFSGRFFREALRPPFEFNEFLRQCYQIGNRSLTLVLVTGFIIGLVLDL 68

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q    + QFGA  +  +++ I  +RE+G ++TA++ AGR  S I AE+GSM++ E+IDA+
Sbjct: 69  QSRPTMIQFGAISWMPNMVGISIVRELGPVITALVCAGRISSGIGAELGSMRVTEQIDAM 128

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
              G +  + L+  R+ A I+ LPLL IL++  ++ G++++     ++ F ++F+     
Sbjct: 129 EVSGTNPFKYLVVTRVMASILMLPLLVILSDAVSLFGSALIENIKGNVSFQLYFNTIFDA 188

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL- 363
            +  ++   +IK  F   AIG+V   +G+     +  +G    T VV +  ++ +ID + 
Sbjct: 189 LSYTDLIPAIIKTFFFGFAIGLVGCFKGYYCKKGTAGVGIAANTAVVMTSLLLFVIDFVA 248

Query: 364 --FAIFYFAI 371
              +  +F +
Sbjct: 249 VFISNIFFDV 258


>gi|322515301|ref|ZP_08068298.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Actinobacillus ureae ATCC
           25976]
 gi|322118677|gb|EFX90889.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Actinobacillus ureae ATCC
           25976]
          Length = 258

 Score =  230 bits (586), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 70/239 (29%), Positives = 122/239 (51%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
            G              +F+     LI+Q+Y +GV  + +++L     G V+  QG   L 
Sbjct: 19  FGRATFMLFGALIGKPQFRKHTPLLIKQLYVLGVQSLLIIMLSGLFIGMVLGLQGYVVLV 78

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            F AE     L+S+  LRE+G ++TA++ AGR+GSA+ AEIG MK  E++ ++  M +D 
Sbjct: 79  DFAAETSLGTLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDP 138

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           +R +I+PR WA +IS+P+L  +     I G S+V   +  +    F+S   ++   +++ 
Sbjct: 139 LRRIIAPRFWAGVISMPILAAIFTAIGIWGGSLVGVDWKGVDGGSFWSVMQNSVDWSDLI 198

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            G IK+   A A+  +A+  G+     S  + +  T  VV +  +V+ +D +     F 
Sbjct: 199 NGFIKSIIFAFAVVWIALFNGYDSVATSEGISQATTRTVVHASLVVLGLDFILTAIMFG 257


>gi|186477517|ref|YP_001858987.1| hypothetical protein Bphy_2769 [Burkholderia phymatum STM815]
 gi|184193976|gb|ACC71941.1| protein of unknown function DUF140 [Burkholderia phymatum STM815]
          Length = 255

 Score =  230 bits (586), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 60/262 (22%), Positives = 132/262 (50%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +   A +   ++                   + +Q+++VG   + 
Sbjct: 1   MISTIGRSVICGLGQTGYAARMFLRLVLEFFPLLRRP-------RLVTKQIHFVGNYSLV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D ++++++PR+WA II++P+L  + +   +IG  IV    
Sbjct: 114 AEIGLMKAGEQLTAMEMMAVDPLKVVVAPRMWAGIIAMPVLAAIFSAVGVIGGYIVGVLM 173

Query: 290 YDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+         ++  G+IK+     A+  +A+ +G+        + +  T 
Sbjct: 174 IGVDAGAFWSQMQGGVDAYRDVGNGVIKSIVFGFAVTFIALYQGYEAKPTPEGVSRATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVYASLAVLGLDFLLTALMFS 255


>gi|28871581|ref|NP_794200.1| hypothetical protein PSPTO_4446 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28854833|gb|AAO57895.1| membrane protein, putative [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 265

 Score =  230 bits (586), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 69/267 (25%), Positives = 138/267 (51%), Gaps = 8/267 (2%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
            S  +    +G+  +  +         L   +   G   +S          L++Q+Y VG
Sbjct: 4   KSLMDRVRLLGRSAIDIVAVLGRSGLFLVHALLGRGGAGSS-------FQLLVKQLYSVG 56

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
           V  + ++++     G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+
Sbjct: 57  VMSLVIIVVSGMFIGMVLALQGFSILAKYGSEQAVGQMVALTLLRELGPVVTALLFAGRA 116

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  ISLP+L ++ +   I GAS 
Sbjct: 117 GSALSAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFSVVGIWGASW 176

Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           V   +  +    F+S   ++ +   ++  G+IK+   A  +  +A+ +G+     S  + 
Sbjct: 177 VAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCDPTSEGIS 236

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  T  VV +   V+ +D +     F 
Sbjct: 237 RATTKTVVYASLAVLGLDFILTALMFG 263


>gi|271498870|ref|YP_003331895.1| hypothetical protein Dd586_0293 [Dickeya dadantii Ech586]
 gi|270342425|gb|ACZ75190.1| protein of unknown function DUF140 [Dickeya dadantii Ech586]
          Length = 260

 Score =  229 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 65/256 (25%), Positives = 120/256 (46%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +              G              +       L +Q+Y VGV  + ++++  
Sbjct: 4   QALASLGRVGIQVCASFGRAGLMLFNALVGKPEPARQWPLLRKQLYSVGVQSLLIIMVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  VFIGMVLGLQGYLVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +++PR WA +IS+PLLT++     I G ++V   +  I   
Sbjct: 124 KATEQLSSMEMMAVDPLRRVVAPRFWAGVISMPLLTVIFVAVGIWGGALVGVDWKGIDSG 183

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +      ++   +IK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQNAVEWQKDLLNCVIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|307153262|ref|YP_003888646.1| hypothetical protein Cyan7822_3422 [Cyanothece sp. PCC 7822]
 gi|306983490|gb|ADN15371.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7822]
          Length = 264

 Score =  229 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 65/248 (26%), Positives = 119/248 (47%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +   S    L   I   G+      K+K    + + QM  VG   + + ++ +   G V 
Sbjct: 9   SGFSSWFARLSAAILLGGQVFFHLLKYKIHRRNTLDQMAIVGPESLTISLVTAAFVGMVF 68

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
             Q + +   FGA  +   ++S+   RE+  +LTAV++AGR GSA  AEIG+M++ E+ID
Sbjct: 69  TIQVSREFIYFGAGSYVGGVLSLALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQID 128

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +  D +  L+ PR+ A  + LP+LT+LA  + I G   +    Y+I  AVF +   
Sbjct: 129 ALHMLKTDPIDYLVIPRVLACSLMLPILTVLALLTGIAGGIAIADSLYNISPAVFLNSAR 188

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           +     ++ + ++K+      I ++    G      +  +G+  TT VV ++  + + + 
Sbjct: 189 NFLQTWDLVSCILKSAVFGSLIAVIGCSWGLTTSGGAKGVGQSTTTAVVTALLAIFVTNF 248

Query: 363 LFAIFYFA 370
             +   F 
Sbjct: 249 FLSWLMFQ 256


>gi|163797504|ref|ZP_02191455.1| hypothetical protein BAL199_23507 [alpha proteobacterium BAL199]
 gi|159177253|gb|EDP61812.1| hypothetical protein BAL199_23507 [alpha proteobacterium BAL199]
          Length = 282

 Score =  229 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 59/253 (23%), Positives = 115/253 (45%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +    +   S    LG +    G       +   +   + RQ   +G   +PVV L +  
Sbjct: 29  LATIGSTFLSFLTALGRLALFAGSAVGHCVRPPIYPRLIGRQFLEIGYYSLPVVGLTTLF 88

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           +G V+A Q     ++F AE     ++ +   RE+  +L  +M+AGR G+A+ AEIG+M++
Sbjct: 89  SGMVLALQSYSGFARFSAESAVATVVVLSITRELAPVLAGLMVAGRVGAAMAAEIGTMRV 148

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+ T+  +  + LI+PR+ A  +SLP+L ++ +   + G  +V           +
Sbjct: 149 TEQIDALTTLSTNPFKYLIAPRLIAATLSLPILVLIGDVIGVFGGYVVGVYKLGFNAGNY 208

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                      ++ +GL+KA      + ++    G+     +  +G   T  VV +  ++
Sbjct: 209 IQSTVQFLEQIDVISGLVKAGVFGFIVALMGCYHGYHSRGGAQGVGAATTNAVVTASIMI 268

Query: 358 IIIDSLFAIFYFA 370
           +I +      +F 
Sbjct: 269 LIANYAITELFFG 281


>gi|82778508|ref|YP_404857.1| hypothetical protein SDY_3375 [Shigella dysenteriae Sd197]
 gi|170765889|ref|ZP_02900700.1| toluene ABC transporter, permease protein [Escherichia albertii
           TW07627]
 gi|81242656|gb|ABB63366.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
 gi|170125035|gb|EDS93966.1| toluene ABC transporter, permease protein [Escherichia albertii
           TW07627]
          Length = 260

 Score =  229 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 71/255 (27%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++++   
Sbjct: 5   ALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGV 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLTI+     I G S+V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDSGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   +      ++   LIK+   A  +  +++  G+     S  + +  T  VV S  
Sbjct: 185 FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|33151499|ref|NP_872852.1| permease [Haemophilus ducreyi 35000HP]
 gi|33147719|gb|AAP95241.1| probable permease [Haemophilus ducreyi 35000HP]
          Length = 259

 Score =  229 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 76/264 (28%), Positives = 130/264 (49%), Gaps = 7/264 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N   H+G+  ++ +        +L       G       +F      LI+Q+Y +GV 
Sbjct: 2   VLNFINHLGEHCIQLVKTFGRATLMLW------GALIGKP-QFSKHTPLLIKQLYILGVQ 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++IL     G V+A QG   L  F AE     L+S+  LRE+G ++TA++ AGR+GS
Sbjct: 55  SLLIIILSGLFIGMVLALQGYVVLVDFAAESSLGTLISLSLLRELGPVVTALLFAGRAGS 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEI  MK  E++ ++  M +D +R +I+PR WA +IS+P+L ++     I G S+V 
Sbjct: 115 ALTAEIALMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPILAVIFTAIGIWGGSLVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
             +  +    F+S    +    ++  G IK+   A A+  +A+  G+     S  + +  
Sbjct: 175 VDWKGVDSGSFWSVMQHSVNGQDLINGFIKSIIFAIAVVWIALFNGYDSTATSEGISQAT 234

Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370
           T  VV +  IV+ +D +     F 
Sbjct: 235 TRTVVHASLIVLGLDFILTAMMFG 258


>gi|307129071|ref|YP_003881087.1| putative toluene transporter subunit: membrane protein [Dickeya
           dadantii 3937]
 gi|306526600|gb|ADM96530.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Dickeya dadantii 3937]
          Length = 260

 Score =  229 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 65/256 (25%), Positives = 120/256 (46%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +              G              +       L +Q+Y VGV  + ++++  
Sbjct: 4   QALASLGRVGIQVCAAFGRAGLMLFNALVGKPEPAKQWPLLRKQLYSVGVQSLLIIMVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  VFIGMVLGLQGYLVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +++PR WA +IS+PLLT++     I G ++V   +  I   
Sbjct: 124 KTTEQLSSMEMMAVDPLRRVVAPRFWAGVISMPLLTVIFVAVGIWGGALVGVDWKGIDSG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +      ++   +IK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQNAVEWRKDLLNCVIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|148828248|ref|YP_001293001.1| ABC transporter permease [Haemophilus influenzae PittGG]
 gi|148719490|gb|ABR00618.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae PittGG]
          Length = 261

 Score =  229 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 77/265 (29%), Positives = 135/265 (50%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N    +GK+++ F         +L       G       + +     L++QM+ +GV 
Sbjct: 2   IVNFISTLGKQVIDFFRALGRAGFML------FGALIGKP-QIRKHFPLLVKQMHVLGVQ 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + +++L     G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GS
Sbjct: 55  SLLIILLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGS 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+P+L+IL     I G S+V 
Sbjct: 115 ALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPILSILFIAIGIWGGSLVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
             +  +    F+S   ++ + + +I  G IKA F A A+  +A+  G+     S  + + 
Sbjct: 175 VDWKGVDSGSFWSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYDCMPTSEGISQA 234

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV +  +V+ +D +     F 
Sbjct: 235 TTRTVVHASLVVLGLDFILTAIMFG 259


>gi|91774594|ref|YP_544350.1| hypothetical protein Mfla_0238 [Methylobacillus flagellatus KT]
 gi|91708581|gb|ABE48509.1| protein of unknown function DUF140 [Methylobacillus flagellatus KT]
          Length = 263

 Score =  229 bits (585), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 69/266 (25%), Positives = 136/266 (51%), Gaps = 8/266 (3%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
           +++  N+   IG +++  +    +       V+  +GE           L   IR++Y+ 
Sbjct: 2   FSAVANMLRGIGHRVIDRLWRFGAGIRFFFYVLIYSGESFRR-------LHLTIREIYFT 54

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           GV  + ++++ +F  G V+A QG   L ++G+      L+++  +RE+G ++TA++ AGR
Sbjct: 55  GVLSLIIILVSAFFVGMVLALQGYNTLQRYGSSEAIGVLVALSLVRELGPVVTALLFAGR 114

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           +G+AI AEIG M+  E++ A+  M +  +  +++PR WA + S+PLL  L +   ++G  
Sbjct: 115 AGTAITAEIGLMRATEQLSAMEMMAVSPIARVVAPRFWAGLFSMPLLAALFSMVGVLGGY 174

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
           +V      +    F+S+  ++     +I  G+IK+     A  ++A+ EGF     +  +
Sbjct: 175 LVAVPLIGVDAGAFWSQMQASVDFREDIVNGVIKSLVFGIACTMIALFEGFDAPPTAEGV 234

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFY 368
            +  T  VV S   V+ +D +   F 
Sbjct: 235 SRATTRTVVNSSLAVLGLDFIMTSFM 260


>gi|94264494|ref|ZP_01288281.1| Protein of unknown function DUF140 [delta proteobacterium MLMS-1]
 gi|94266598|ref|ZP_01290280.1| Protein of unknown function DUF140 [delta proteobacterium MLMS-1]
 gi|93452769|gb|EAT03307.1| Protein of unknown function DUF140 [delta proteobacterium MLMS-1]
 gi|93455053|gb|EAT05280.1| Protein of unknown function DUF140 [delta proteobacterium MLMS-1]
          Length = 263

 Score =  229 bits (585), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 75/265 (28%), Positives = 130/265 (49%), Gaps = 13/265 (4%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170
              +G++ +  + D       L   +   G      ++F      ++RQ   +G + +PV
Sbjct: 6   VERLGERSLYILGDLGRMGVFL---LLAVGGLFKRPFRF----AEVVRQTRLIGANSLPV 58

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           +   +  TG V+  QG + L QFGAE      +++  +RE+G +LTA+M+ GR+GSA+ A
Sbjct: 59  IFFTAAFTGMVLGLQGYYTLRQFGAESALGSAVALSLIRELGPVLTALMVIGRAGSAMCA 118

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           EIG M+ +E+IDA+  M +D  R LI+P++ A +IS+PLLT++ N   I G  +      
Sbjct: 119 EIGIMRNSEQIDALECMAVDPFRYLIAPKLLATMISIPLLTLIFNVVGIFGGYVAGVMLL 178

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV------GVHSNSLGK 344
            +    +F+    +   A+I  G+IK+   A  +  +    G+ V      G  +  + +
Sbjct: 179 GVNPGSYFAGMEQSVVDADIRMGIIKSLVFALLVVWICTARGYYVHAIRGAGFGAEGVSR 238

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYF 369
             T  VV S   V++ D L      
Sbjct: 239 ATTQAVVFSSISVLLFDYLLTAVLL 263


>gi|292670497|ref|ZP_06603923.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Selenomonas noxia ATCC 43541]
 gi|292647907|gb|EFF65879.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Selenomonas noxia ATCC 43541]
          Length = 310

 Score =  229 bits (585), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 75/306 (24%), Positives = 133/306 (43%), Gaps = 1/306 (0%)

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           +            +   L     +        Q P     Y         + + +     
Sbjct: 6   QRRSSTDADAERPYRALLLPAAGYRPCSDEGRQLPAAVEAYIKTGGGGKTVQRILEAVGA 65

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
              +    +G V    GE      + +  + S+I QM ++G   + +V L    TG V+ 
Sbjct: 66  FVLTHLANIGRVTLLYGETIRQVTR-RLRVRSIIYQMAHLGADSLLIVGLTLLFTGVVLT 124

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
            Q A +  ++GA+     +++I   RE+G +L  V+ AGR G+AI AE+ +MK+ E+IDA
Sbjct: 125 LQIAHEFIRYGAQSTVGAVIAIGIGRELGPVLVGVVCAGRVGAAITAEVSTMKVTEQIDA 184

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R M +  V  LI PR+ A ++ +P+LT+  +   ++G  +    Y  I    F +    
Sbjct: 185 LRVMAVSPVNYLIVPRMLACMVVVPILTVFGDVIGVLGGYLTAVYYSGISAYTFTNSITQ 244

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
            A + ++  GLIKA F    I ++    G      +  +GK     VV SI ++ I++++
Sbjct: 245 FALIYDMTGGLIKAIFFGNVIAVLGCHYGLNAPSGAEGVGKATMHTVVTSIIVIFILNAV 304

Query: 364 FAIFYF 369
              F F
Sbjct: 305 LTFFLF 310


>gi|107024236|ref|YP_622563.1| hypothetical protein Bcen_2692 [Burkholderia cenocepacia AU 1054]
 gi|116688439|ref|YP_834062.1| hypothetical protein Bcen2424_0415 [Burkholderia cenocepacia
           HI2424]
 gi|206558708|ref|YP_002229468.1| hypothetical protein BCAL0302 [Burkholderia cenocepacia J2315]
 gi|105894425|gb|ABF77590.1| protein of unknown function DUF140 [Burkholderia cenocepacia AU
           1054]
 gi|116646528|gb|ABK07169.1| protein of unknown function DUF140 [Burkholderia cenocepacia
           HI2424]
 gi|198034745|emb|CAR50612.1| putative membrane protein [Burkholderia cenocepacia J2315]
          Length = 255

 Score =  229 bits (585), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 59/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +     +   ++                   + +Q++++G     
Sbjct: 1   MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D ++ +I+PR+WA II++PLL  + N   ++G   V    
Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKNVIAPRMWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+      +  ++  G+IK+     A+  +A+ +G+        + +  T 
Sbjct: 174 IGVDPGAFWSQMQGGVQVWADVGNGVIKSIVFGFAVTFIALYQGYEAKPTPEGVSRATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255


>gi|15803734|ref|NP_289768.1| hypothetical protein Z4557 [Escherichia coli O157:H7 EDL933]
 gi|15833327|ref|NP_312100.1| hypothetical protein ECs4073 [Escherichia coli O157:H7 str. Sakai]
 gi|16131084|ref|NP_417661.1| ABC transporter maintaining OM lipid asymmetry, inner membrane
           permease protein [Escherichia coli str. K-12 substr.
           MG1655]
 gi|24114483|ref|NP_708993.1| integral membrane protein [Shigella flexneri 2a str. 301]
 gi|26249780|ref|NP_755820.1| hypothetical protein c3954 [Escherichia coli CFT073]
 gi|30064532|ref|NP_838703.1| integral membrane protein [Shigella flexneri 2a str. 2457T]
 gi|82545568|ref|YP_409515.1| hypothetical protein SBO_3188 [Shigella boydii Sb227]
 gi|89109957|ref|AP_003737.1| predicted toluene transporter subunit [Escherichia coli str. K-12
           substr. W3110]
 gi|91212619|ref|YP_542605.1| hypothetical protein UTI89_C3630 [Escherichia coli UTI89]
 gi|110643434|ref|YP_671164.1| hypothetical protein ECP_3281 [Escherichia coli 536]
 gi|110807060|ref|YP_690580.1| integral membrane protein [Shigella flexneri 5 str. 8401]
 gi|117625486|ref|YP_858809.1| putative toluene transporter subunit: permease component
           [Escherichia coli APEC O1]
 gi|157156689|ref|YP_001464672.1| toluene ABC transporter, permease protein [Escherichia coli
           E24377A]
 gi|157162678|ref|YP_001459996.1| toluene ABC transporter, permease protein [Escherichia coli HS]
 gi|168751600|ref|ZP_02776622.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4113]
 gi|168754176|ref|ZP_02779183.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4401]
 gi|168763731|ref|ZP_02788738.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4501]
 gi|168769050|ref|ZP_02794057.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4486]
 gi|168777249|ref|ZP_02802256.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4196]
 gi|168781338|ref|ZP_02806345.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4076]
 gi|168786080|ref|ZP_02811087.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC869]
 gi|168800908|ref|ZP_02825915.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC508]
 gi|170018556|ref|YP_001723510.1| hypothetical protein EcolC_0506 [Escherichia coli ATCC 8739]
 gi|170082728|ref|YP_001732048.1| toluene ABC transporter membrane protein [Escherichia coli str.
           K-12 substr. DH10B]
 gi|170684208|ref|YP_001745466.1| toluene ABC transporter permease [Escherichia coli SMS-3-5]
 gi|187733158|ref|YP_001881891.1| toluene ABC transporter permease [Shigella boydii CDC 3083-94]
 gi|188492313|ref|ZP_02999583.1| toluene ABC transporter, permease protein [Escherichia coli 53638]
 gi|191168635|ref|ZP_03030417.1| toluene ABC transporter, permease protein [Escherichia coli B7A]
 gi|191174475|ref|ZP_03035975.1| toluene ABC transporter, permease protein [Escherichia coli F11]
 gi|193070286|ref|ZP_03051229.1| toluene ABC transporter, permease protein [Escherichia coli
           E110019]
 gi|194429132|ref|ZP_03061662.1| toluene ABC transporter, permease protein [Escherichia coli B171]
 gi|194434508|ref|ZP_03066768.1| toluene ABC transporter, permease protein [Shigella dysenteriae
           1012]
 gi|194439172|ref|ZP_03071253.1| toluene ABC transporter, permease protein [Escherichia coli 101-1]
 gi|195940050|ref|ZP_03085432.1| toluene ABC transporter membrane protein [Escherichia coli O157:H7
           str. EC4024]
 gi|208805807|ref|ZP_03248144.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4206]
 gi|208814152|ref|ZP_03255481.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4045]
 gi|208818401|ref|ZP_03258721.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4042]
 gi|209399676|ref|YP_002272664.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4115]
 gi|209920669|ref|YP_002294753.1| putative ABC transporter permease [Escherichia coli SE11]
 gi|215488510|ref|YP_002330941.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Escherichia coli O127:H6 str. E2348/69]
 gi|217327544|ref|ZP_03443627.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. TW14588]
 gi|218555764|ref|YP_002388677.1| toluene ABC transporter membrane protein [Escherichia coli IAI1]
 gi|218560264|ref|YP_002393177.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli S88]
 gi|218691484|ref|YP_002399696.1| toluene ABC transporter membrane protein [Escherichia coli ED1a]
 gi|218696899|ref|YP_002404566.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli 55989]
 gi|218701963|ref|YP_002409592.1| toluene ABC transporter membrane protein [Escherichia coli IAI39]
 gi|218706814|ref|YP_002414333.1| toluene ABC transporter membrane protein [Escherichia coli UMN026]
 gi|227887915|ref|ZP_04005720.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Escherichia coli 83972]
 gi|237706054|ref|ZP_04536535.1| integral membrane protein [Escherichia sp. 3_2_53FAA]
 gi|238902296|ref|YP_002928092.1| putative toluene transporter subunit: membrane component of ABC
           superfamily [Escherichia coli BW2952]
 gi|253771972|ref|YP_003034803.1| hypothetical protein ECBD_0548 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254038359|ref|ZP_04872417.1| toluene ABC transporter membrane protein [Escherichia sp. 1_1_43]
 gi|254163136|ref|YP_003046244.1| putative toluene transporter subunit membrane component of ABC
           superfamily [Escherichia coli B str. REL606]
 gi|254795143|ref|YP_003079980.1| putative toluene ABC transporter membrane protein [Escherichia coli
           O157:H7 str. TW14359]
 gi|256018887|ref|ZP_05432752.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily protein [Shigella sp. D9]
 gi|256024231|ref|ZP_05438096.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily protein [Escherichia sp. 4_1_40B]
 gi|260846007|ref|YP_003223785.1| putative toluene transporter subunit [Escherichia coli O103:H2 str.
           12009]
 gi|260857321|ref|YP_003231212.1| putative toluene transporter subunit [Escherichia coli O26:H11 str.
           11368]
 gi|260869945|ref|YP_003236347.1| putative toluene transporter subunit [Escherichia coli O111:H- str.
           11128]
 gi|261228205|ref|ZP_05942486.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily protein [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261255061|ref|ZP_05947594.1| putative toluene transporter subunit [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291284568|ref|YP_003501386.1| hypothetical protein G2583_3919 [Escherichia coli O55:H7 str.
           CB9615]
 gi|293406803|ref|ZP_06650729.1| ABC transporter [Escherichia coli FVEC1412]
 gi|293412565|ref|ZP_06655288.1| conserved hypothetical protein [Escherichia coli B354]
 gi|293416623|ref|ZP_06659262.1| inner membrane protein yrbE [Escherichia coli B185]
 gi|293449527|ref|ZP_06663948.1| UPF0393 inner membrane protein yrbE [Escherichia coli B088]
 gi|298382544|ref|ZP_06992141.1| ABC transport system permease [Escherichia coli FVEC1302]
 gi|300817551|ref|ZP_07097767.1| toluene tolerance protein Ttg2B [Escherichia coli MS 107-1]
 gi|300823840|ref|ZP_07103964.1| toluene tolerance protein Ttg2B [Escherichia coli MS 119-7]
 gi|300897962|ref|ZP_07116338.1| toluene tolerance protein Ttg2B [Escherichia coli MS 198-1]
 gi|300904386|ref|ZP_07122234.1| toluene tolerance protein Ttg2B [Escherichia coli MS 84-1]
 gi|300918956|ref|ZP_07135511.1| toluene tolerance protein Ttg2B [Escherichia coli MS 115-1]
 gi|300926061|ref|ZP_07141883.1| toluene tolerance protein Ttg2B [Escherichia coli MS 182-1]
 gi|300929890|ref|ZP_07145332.1| toluene tolerance protein Ttg2B [Escherichia coli MS 187-1]
 gi|300938110|ref|ZP_07152884.1| toluene tolerance protein Ttg2B [Escherichia coli MS 21-1]
 gi|300948849|ref|ZP_07162914.1| toluene tolerance protein Ttg2B [Escherichia coli MS 116-1]
 gi|300955783|ref|ZP_07168125.1| toluene tolerance protein Ttg2B [Escherichia coli MS 175-1]
 gi|300979957|ref|ZP_07174809.1| toluene tolerance protein Ttg2B [Escherichia coli MS 200-1]
 gi|300990924|ref|ZP_07179376.1| toluene tolerance protein Ttg2B [Escherichia coli MS 45-1]
 gi|301022096|ref|ZP_07186022.1| toluene tolerance protein Ttg2B [Escherichia coli MS 69-1]
 gi|301025904|ref|ZP_07189391.1| toluene tolerance protein Ttg2B [Escherichia coli MS 196-1]
 gi|301047959|ref|ZP_07195004.1| toluene tolerance protein Ttg2B [Escherichia coli MS 185-1]
 gi|301306740|ref|ZP_07212794.1| toluene tolerance protein Ttg2B [Escherichia coli MS 124-1]
 gi|301326373|ref|ZP_07219737.1| toluene tolerance protein Ttg2B [Escherichia coli MS 78-1]
 gi|301644908|ref|ZP_07244877.1| toluene tolerance protein Ttg2B [Escherichia coli MS 146-1]
 gi|306816464|ref|ZP_07450596.1| toluene ABC transporter, permease protein [Escherichia coli NC101]
 gi|307139880|ref|ZP_07499236.1| toluene ABC transporter, permease protein [Escherichia coli H736]
 gi|307313101|ref|ZP_07592727.1| protein of unknown function DUF140 [Escherichia coli W]
 gi|309793773|ref|ZP_07688199.1| toluene tolerance protein Ttg2B [Escherichia coli MS 145-7]
 gi|312968467|ref|ZP_07782676.1| toluene tolerance protein Ttg2B [Escherichia coli 2362-75]
 gi|312972532|ref|ZP_07786706.1| toluene tolerance protein Ttg2B [Escherichia coli 1827-70]
 gi|331643892|ref|ZP_08345023.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli H736]
 gi|331648994|ref|ZP_08350082.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli M605]
 gi|331654798|ref|ZP_08355798.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli M718]
 gi|331659481|ref|ZP_08360423.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli TA206]
 gi|331664807|ref|ZP_08365712.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli TA143]
 gi|331670021|ref|ZP_08370866.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli TA271]
 gi|331674724|ref|ZP_08375483.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli TA280]
 gi|331679273|ref|ZP_08379945.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli H591]
 gi|331684841|ref|ZP_08385433.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli H299]
 gi|54040598|sp|P64607|MLAE_ECOL6 RecName: Full=Probable phospholipid ABC transporter permease
           protein mlaE
 gi|54040599|sp|P64608|MLAE_ECO57 RecName: Full=Probable phospholipid ABC transporter permease
           protein mlaE
 gi|54040600|sp|P64609|MLAE_SHIFL RecName: Full=Probable phospholipid ABC transporter permease
           protein mlaE
 gi|54042861|sp|P64606|MLAE_ECOLI RecName: Full=Probable phospholipid ABC transporter permease
           protein mlaE
 gi|12517809|gb|AAG58328.1|AE005547_14 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
 gi|26110208|gb|AAN82394.1|AE016767_154 Hypothetical protein yrbE [Escherichia coli CFT073]
 gi|606132|gb|AAA57995.1| ORF_f260 [Escherichia coli str. K-12 substr. MG1655]
 gi|1789585|gb|AAC76226.1| ABC transporter maintaining OM lipid asymmetry, inner membrane
           permease protein [Escherichia coli str. K-12 substr.
           MG1655]
 gi|13363546|dbj|BAB37496.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|24053666|gb|AAN44700.1| integral membrane protein [Shigella flexneri 2a str. 301]
 gi|30042791|gb|AAP18514.1| integral membrane protein [Shigella flexneri 2a str. 2457T]
 gi|81246979|gb|ABB67687.1| conserved hypothetical protein [Shigella boydii Sb227]
 gi|85675988|dbj|BAE77238.1| predicted toluene transporter subunit [Escherichia coli str. K12
           substr. W3110]
 gi|91074193|gb|ABE09074.1| hypothetical protein UTI89_C3630 [Escherichia coli UTI89]
 gi|110345026|gb|ABG71263.1| putative membrane protein [Escherichia coli 536]
 gi|110616608|gb|ABF05275.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
 gi|115514610|gb|ABJ02685.1| putative toluene transporter subunit: permease component
           [Escherichia coli APEC O1]
 gi|157068358|gb|ABV07613.1| toluene ABC transporter, permease protein [Escherichia coli HS]
 gi|157078719|gb|ABV18427.1| toluene ABC transporter, permease protein [Escherichia coli
           E24377A]
 gi|169753484|gb|ACA76183.1| protein of unknown function DUF140 [Escherichia coli ATCC 8739]
 gi|169890563|gb|ACB04270.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Escherichia coli str. K-12 substr. DH10B]
 gi|170521926|gb|ACB20104.1| toluene ABC transporter, permease protein [Escherichia coli
           SMS-3-5]
 gi|187430150|gb|ACD09424.1| toluene ABC transporter, permease protein [Shigella boydii CDC
           3083-94]
 gi|187767468|gb|EDU31312.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4196]
 gi|188014389|gb|EDU52511.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4113]
 gi|188487512|gb|EDU62615.1| toluene ABC transporter, permease protein [Escherichia coli 53638]
 gi|189001139|gb|EDU70125.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4076]
 gi|189358631|gb|EDU77050.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4401]
 gi|189361791|gb|EDU80210.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4486]
 gi|189366134|gb|EDU84550.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4501]
 gi|189373916|gb|EDU92332.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC869]
 gi|189376865|gb|EDU95281.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC508]
 gi|190901329|gb|EDV61096.1| toluene ABC transporter, permease protein [Escherichia coli B7A]
 gi|190905230|gb|EDV64869.1| toluene ABC transporter, permease protein [Escherichia coli F11]
 gi|192956345|gb|EDV86805.1| toluene ABC transporter, permease protein [Escherichia coli
           E110019]
 gi|194412857|gb|EDX29149.1| toluene ABC transporter, permease protein [Escherichia coli B171]
 gi|194417287|gb|EDX33396.1| toluene ABC transporter, permease protein [Shigella dysenteriae
           1012]
 gi|194421868|gb|EDX37874.1| toluene ABC transporter, permease protein [Escherichia coli 101-1]
 gi|208725608|gb|EDZ75209.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4206]
 gi|208735429|gb|EDZ84116.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4045]
 gi|208738524|gb|EDZ86206.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4042]
 gi|209161076|gb|ACI38509.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4115]
 gi|209758098|gb|ACI77361.1| hypothetical protein ECs4073 [Escherichia coli]
 gi|209758100|gb|ACI77362.1| hypothetical protein ECs4073 [Escherichia coli]
 gi|209758102|gb|ACI77363.1| hypothetical protein ECs4073 [Escherichia coli]
 gi|209758104|gb|ACI77364.1| hypothetical protein ECs4073 [Escherichia coli]
 gi|209758106|gb|ACI77365.1| hypothetical protein ECs4073 [Escherichia coli]
 gi|209913928|dbj|BAG79002.1| putative ABC transporter permease component [Escherichia coli SE11]
 gi|215266582|emb|CAS11021.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Escherichia coli O127:H6 str. E2348/69]
 gi|217319911|gb|EEC28336.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. TW14588]
 gi|218353631|emb|CAU99839.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli 55989]
 gi|218362532|emb|CAR00156.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli IAI1]
 gi|218367033|emb|CAR04804.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli S88]
 gi|218371949|emb|CAR19805.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli IAI39]
 gi|218429048|emb|CAR09855.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli ED1a]
 gi|218433911|emb|CAR14828.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli UMN026]
 gi|222034911|emb|CAP77654.1| UPF0393 inner membrane protein yrbE [Escherichia coli LF82]
 gi|226839983|gb|EEH72004.1| toluene ABC transporter membrane protein [Escherichia sp. 1_1_43]
 gi|226899094|gb|EEH85353.1| integral membrane protein [Escherichia sp. 3_2_53FAA]
 gi|227835311|gb|EEJ45777.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Escherichia coli 83972]
 gi|238863136|gb|ACR65134.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Escherichia coli BW2952]
 gi|242378737|emb|CAQ33527.1| MlaE, subunit of phospholipid ABC transporter [Escherichia coli
           BL21(DE3)]
 gi|253323016|gb|ACT27618.1| protein of unknown function DUF140 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253975037|gb|ACT40708.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Escherichia coli B str. REL606]
 gi|253979193|gb|ACT44863.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Escherichia coli BL21(DE3)]
 gi|254594543|gb|ACT73904.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Escherichia coli O157:H7 str. TW14359]
 gi|257755970|dbj|BAI27472.1| predicted toluene transporter subunit [Escherichia coli O26:H11
           str. 11368]
 gi|257761154|dbj|BAI32651.1| predicted toluene transporter subunit [Escherichia coli O103:H2
           str. 12009]
 gi|257766301|dbj|BAI37796.1| predicted toluene transporter subunit [Escherichia coli O111:H-
           str. 11128]
 gi|260447779|gb|ACX38201.1| protein of unknown function DUF140 [Escherichia coli DH1]
 gi|281180236|dbj|BAI56566.1| putative ABC transporter permease component [Escherichia coli SE15]
 gi|281602577|gb|ADA75561.1| inner membrane protein yrbE [Shigella flexneri 2002017]
 gi|284923216|emb|CBG36310.1| putative organic solvent tolerance protein [Escherichia coli 042]
 gi|290764441|gb|ADD58402.1| UPF0393 inner membrane protein yrbE [Escherichia coli O55:H7 str.
           CB9615]
 gi|291322617|gb|EFE62046.1| UPF0393 inner membrane protein yrbE [Escherichia coli B088]
 gi|291426809|gb|EFE99841.1| ABC transporter [Escherichia coli FVEC1412]
 gi|291431979|gb|EFF04962.1| inner membrane protein yrbE [Escherichia coli B185]
 gi|291469336|gb|EFF11827.1| conserved hypothetical protein [Escherichia coli B354]
 gi|294493221|gb|ADE91977.1| putative ABC transporter, permease protein [Escherichia coli
           IHE3034]
 gi|298277684|gb|EFI19200.1| ABC transport system permease [Escherichia coli FVEC1302]
 gi|299879926|gb|EFI88137.1| toluene tolerance protein Ttg2B [Escherichia coli MS 196-1]
 gi|300300191|gb|EFJ56576.1| toluene tolerance protein Ttg2B [Escherichia coli MS 185-1]
 gi|300307892|gb|EFJ62412.1| toluene tolerance protein Ttg2B [Escherichia coli MS 200-1]
 gi|300317329|gb|EFJ67113.1| toluene tolerance protein Ttg2B [Escherichia coli MS 175-1]
 gi|300358310|gb|EFJ74180.1| toluene tolerance protein Ttg2B [Escherichia coli MS 198-1]
 gi|300397692|gb|EFJ81230.1| toluene tolerance protein Ttg2B [Escherichia coli MS 69-1]
 gi|300403660|gb|EFJ87198.1| toluene tolerance protein Ttg2B [Escherichia coli MS 84-1]
 gi|300407000|gb|EFJ90538.1| toluene tolerance protein Ttg2B [Escherichia coli MS 45-1]
 gi|300413898|gb|EFJ97208.1| toluene tolerance protein Ttg2B [Escherichia coli MS 115-1]
 gi|300417919|gb|EFK01230.1| toluene tolerance protein Ttg2B [Escherichia coli MS 182-1]
 gi|300451654|gb|EFK15274.1| toluene tolerance protein Ttg2B [Escherichia coli MS 116-1]
 gi|300456873|gb|EFK20366.1| toluene tolerance protein Ttg2B [Escherichia coli MS 21-1]
 gi|300462176|gb|EFK25669.1| toluene tolerance protein Ttg2B [Escherichia coli MS 187-1]
 gi|300523608|gb|EFK44677.1| toluene tolerance protein Ttg2B [Escherichia coli MS 119-7]
 gi|300529849|gb|EFK50911.1| toluene tolerance protein Ttg2B [Escherichia coli MS 107-1]
 gi|300838019|gb|EFK65779.1| toluene tolerance protein Ttg2B [Escherichia coli MS 124-1]
 gi|300846937|gb|EFK74697.1| toluene tolerance protein Ttg2B [Escherichia coli MS 78-1]
 gi|301076759|gb|EFK91565.1| toluene tolerance protein Ttg2B [Escherichia coli MS 146-1]
 gi|305850029|gb|EFM50488.1| toluene ABC transporter, permease protein [Escherichia coli NC101]
 gi|306907012|gb|EFN37520.1| protein of unknown function DUF140 [Escherichia coli W]
 gi|307555287|gb|ADN48062.1| toluene ABC transporter [Escherichia coli ABU 83972]
 gi|307625207|gb|ADN69511.1| toluene ABC transporter, permease protein [Escherichia coli UM146]
 gi|308122730|gb|EFO59992.1| toluene tolerance protein Ttg2B [Escherichia coli MS 145-7]
 gi|309703620|emb|CBJ02960.1| putative organic solvent tolerance protein [Escherichia coli ETEC
           H10407]
 gi|310334909|gb|EFQ01114.1| toluene tolerance protein Ttg2B [Escherichia coli 1827-70]
 gi|312286685|gb|EFR14596.1| toluene tolerance protein Ttg2B [Escherichia coli 2362-75]
 gi|312947751|gb|ADR28578.1| putative toluene transporter subunit [Escherichia coli O83:H1 str.
           NRG 857C]
 gi|313648563|gb|EFS13005.1| toluene tolerance protein Ttg2B [Shigella flexneri 2a str. 2457T]
 gi|315062500|gb|ADT76827.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Escherichia coli W]
 gi|315137780|dbj|BAJ44939.1| hypothetical protein ECDH1ME8569_3083 [Escherichia coli DH1]
 gi|315257122|gb|EFU37090.1| toluene tolerance protein Ttg2B [Escherichia coli MS 85-1]
 gi|315289007|gb|EFU48405.1| toluene tolerance protein Ttg2B [Escherichia coli MS 110-3]
 gi|315294854|gb|EFU54193.1| toluene tolerance protein Ttg2B [Escherichia coli MS 153-1]
 gi|315297940|gb|EFU57210.1| toluene tolerance protein Ttg2B [Escherichia coli MS 16-3]
 gi|315617277|gb|EFU97886.1| toluene tolerance protein Ttg2B [Escherichia coli 3431]
 gi|320181469|gb|EFW56387.1| Uncharacterized ABC transporter, permease component YrbE [Shigella
           boydii ATCC 9905]
 gi|320186681|gb|EFW61405.1| Uncharacterized ABC transporter, permease component YrbE [Shigella
           flexneri CDC 796-83]
 gi|320189547|gb|EFW64206.1| Uncharacterized ABC transporter, permease component YrbE
           [Escherichia coli O157:H7 str. EC1212]
 gi|320194679|gb|EFW69309.1| Uncharacterized ABC transporter, permease component YrbE
           [Escherichia coli WV_060327]
 gi|320202108|gb|EFW76683.1| Uncharacterized ABC transporter, permease component YrbE
           [Escherichia coli EC4100B]
 gi|320645562|gb|EFX14571.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli O157:H- str. 493-89]
 gi|320650872|gb|EFX19329.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli O157:H- str. H 2687]
 gi|320656253|gb|EFX24165.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320661943|gb|EFX29351.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli O55:H7 str. USDA 5905]
 gi|320666778|gb|EFX33757.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli O157:H7 str. LSU-61]
 gi|323154409|gb|EFZ40610.1| toluene tolerance protein Ttg2B [Escherichia coli EPECa14]
 gi|323162886|gb|EFZ48721.1| toluene tolerance protein Ttg2B [Escherichia coli E128010]
 gi|323165155|gb|EFZ50945.1| toluene tolerance protein Ttg2B [Shigella sonnei 53G]
 gi|323173546|gb|EFZ59175.1| toluene tolerance protein Ttg2B [Escherichia coli LT-68]
 gi|323178630|gb|EFZ64206.1| toluene tolerance protein Ttg2B [Escherichia coli 1180]
 gi|323183148|gb|EFZ68546.1| toluene tolerance protein Ttg2B [Escherichia coli 1357]
 gi|323189185|gb|EFZ74469.1| toluene tolerance protein Ttg2B [Escherichia coli RN587/1]
 gi|323376912|gb|ADX49180.1| protein of unknown function DUF140 [Escherichia coli KO11]
 gi|323936112|gb|EGB32406.1| inner membrane protein yrbE [Escherichia coli E1520]
 gi|323941706|gb|EGB37885.1| inner membrane protein yrbE [Escherichia coli E482]
 gi|323946952|gb|EGB42968.1| inner membrane protein yrbE [Escherichia coli H120]
 gi|323951287|gb|EGB47162.1| inner membrane protein yrbE [Escherichia coli H252]
 gi|323957659|gb|EGB53373.1| inner membrane protein yrbE [Escherichia coli H263]
 gi|323961151|gb|EGB56765.1| inner membrane protein yrbE [Escherichia coli H489]
 gi|323966374|gb|EGB61808.1| inner membrane protein yrbE [Escherichia coli M863]
 gi|323970243|gb|EGB65514.1| inner membrane protein yrbE [Escherichia coli TA007]
 gi|323979089|gb|EGB74167.1| inner membrane protein yrbE [Escherichia coli TW10509]
 gi|324008706|gb|EGB77925.1| toluene tolerance protein Ttg2B [Escherichia coli MS 57-2]
 gi|324012162|gb|EGB81381.1| toluene tolerance protein Ttg2B [Escherichia coli MS 60-1]
 gi|324018354|gb|EGB87573.1| toluene tolerance protein Ttg2B [Escherichia coli MS 117-3]
 gi|324119559|gb|EGC13441.1| inner membrane protein yrbE [Escherichia coli E1167]
 gi|326337894|gb|EGD61728.1| Uncharacterized ABC transporter, permease component YrbE
           [Escherichia coli O157:H7 str. 1125]
 gi|326347464|gb|EGD71189.1| Uncharacterized ABC transporter, permease component YrbE
           [Escherichia coli O157:H7 str. 1044]
 gi|327251285|gb|EGE62974.1| toluene tolerance protein Ttg2B [Escherichia coli STEC_7v]
 gi|330909246|gb|EGH37760.1| uncharacterized ABC transporter, permease component YrbE
           [Escherichia coli AA86]
 gi|331037363|gb|EGI09587.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli H736]
 gi|331042741|gb|EGI14883.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli M605]
 gi|331048180|gb|EGI20257.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli M718]
 gi|331054063|gb|EGI26092.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli TA206]
 gi|331058055|gb|EGI30037.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli TA143]
 gi|331062934|gb|EGI34848.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli TA271]
 gi|331068163|gb|EGI39559.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli TA280]
 gi|331073338|gb|EGI44661.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli H591]
 gi|331078456|gb|EGI49662.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli H299]
 gi|332086231|gb|EGI91389.1| toluene tolerance protein Ttg2B [Shigella boydii 5216-82]
 gi|332086452|gb|EGI91599.1| toluene tolerance protein Ttg2B [Shigella dysenteriae 155-74]
 gi|332090701|gb|EGI95795.1| toluene tolerance protein Ttg2B [Shigella boydii 3594-74]
 gi|332102327|gb|EGJ05673.1| membrane component of ABC superfamily [Shigella sp. D9]
          Length = 260

 Score =  229 bits (585), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++++   
Sbjct: 5   ALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGV 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLT++     I G S+V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGIWGGSLVGVSWKGIDSGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   +      ++   LIK+   A  +  +++  G+     S  + +  T  VV S  
Sbjct: 185 FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|288817534|ref|YP_003431881.1| ABC transporter permease protein [Hydrogenobacter thermophilus
           TK-6]
 gi|288786933|dbj|BAI68680.1| ABC transporter permease protein [Hydrogenobacter thermophilus
           TK-6]
 gi|308751137|gb|ADO44620.1| protein of unknown function DUF140 [Hydrogenobacter thermophilus
           TK-6]
          Length = 245

 Score =  229 bits (585), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 76/237 (32%), Positives = 125/237 (52%), Gaps = 2/237 (0%)

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G++++  G +       K  L   I Q+ Y+G   VPVV++ S  +G VIA Q      +
Sbjct: 11  GVILTLMGIYFMFVNPPK--LRHFISQLAYLGAETVPVVVITSIFSGGVIALQTYSTFHR 68

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
           F AE     +++I   RE+G +L ++M+  R GSA+ A IG+M+I E+IDA+  MG++ V
Sbjct: 69  FNAEFLIGAVVAISMGRELGPVLASLMVVARVGSAMTASIGTMRITEQIDALEVMGINPV 128

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
             L+SPR++A ++ +P+L ILA+ + + G   V  K + +   +F+ +    A   +   
Sbjct: 129 SYLVSPRVFAGVLGVPMLVILADIAGVFGGWFVAVKLFGVNEYLFWEKMRDIAEFYDFIG 188

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           GL KA F    I  V+   GF  G  +  +G+  T  VV S  +++I D       F
Sbjct: 189 GLYKAVFFGLIISAVSCYFGFYTGGGTEGVGRATTNSVVVSSMLILISDYFLTAIIF 245


>gi|186684391|ref|YP_001867587.1| hypothetical protein Npun_R4269 [Nostoc punctiforme PCC 73102]
 gi|186466843|gb|ACC82644.1| protein of unknown function DUF140 [Nostoc punctiforme PCC 73102]
          Length = 265

 Score =  229 bits (585), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 67/239 (28%), Positives = 117/239 (48%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           L   I   G+      + K    + + QM  VG   + + +L +   GAV   Q A +  
Sbjct: 17  LLAAIFLGGQVLVHLLRGKIHRRNTLEQMAAVGPDSLFIALLTAIFVGAVFTIQVAREFI 76

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            FGA      ++SI   RE+  +LTAV++AGR GSA  AEIG+M++ E+IDA+  +  D 
Sbjct: 77  NFGAGNIIGGVLSIALTRELSPVLTAVVLAGRVGSAFAAEIGTMRVTEQIDAMLMLKTDP 136

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           +  L+ PR+ A  + LP+LT+L+  + + G  I+    Y++   VF     +   + +I 
Sbjct: 137 IDYLVIPRVIACCLMLPILTLLSLITGMFGGFIIATNVYNLSDTVFLDSARNFLGIWDII 196

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           + ++KA      I ++    G      +  +G+  TT VV ++ I+ + +   +   F 
Sbjct: 197 SAMLKAFCFGILIAVIGCSWGLTTTGGAKGVGQSTTTAVVTALLIIFVSNFFLSWLMFQ 255


>gi|300113019|ref|YP_003759594.1| hypothetical protein Nwat_0303 [Nitrosococcus watsonii C-113]
 gi|299538956|gb|ADJ27273.1| protein of unknown function DUF140 [Nitrosococcus watsonii C-113]
          Length = 260

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +++           LG      G+   S          LI Q+Y VGV  +P++++  
Sbjct: 3   EALLRLGRWGLGTFERLGRGHLFLGQLLLSIAALLLRFPLLITQVYSVGVLTLPIIVVSG 62

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L  FGAE     ++S+  +RE+G +++A++ AGR+GSA+ AEIG M
Sbjct: 63  AFVGMVLGLQGYNTLVDFGAEESLGVIVSLSLVRELGPVVSALLFAGRAGSALTAEIGLM 122

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++  +  M +D VR + +PR +A   S+PLL  + +   ++G   V      +   
Sbjct: 123 KATEQLSGMEMMAVDPVRRIAAPRFFAGCFSMPLLAAIFSAVGVLGGYFVGVGLLGVDEG 182

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S+  ++     ++  G+IK+      +  +A+ EG+     S+ +G+  T  VV S 
Sbjct: 183 AFWSQMQASTDWEEDVLNGVIKSIVFGIVVTWIAVFEGYDTVPTSDGVGRATTRTVVHSA 242

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 243 FAVLALDFVLTALMFG 258


>gi|320640265|gb|EFX09837.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli O157:H7 str. G5101]
          Length = 260

 Score =  229 bits (584), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++++   
Sbjct: 5   ALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGV 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLT++     I G S+V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFAAVGIWGGSLVGVSWKGIDSGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   +      ++   LIK+   A  +  +++  G+     S  + +  T  VV S  
Sbjct: 185 FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|319897434|ref|YP_004135631.1| abc-type transport system protein, permease component [Haemophilus
           influenzae F3031]
 gi|317432940|emb|CBY81307.1| conserved ABC-type transport system protein,permease component
           [Haemophilus influenzae F3031]
          Length = 261

 Score =  229 bits (584), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 78/267 (29%), Positives = 135/267 (50%), Gaps = 8/267 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N    +GK+ + F         +L       G       + +     L++QM+ +GV 
Sbjct: 2   IVNFISALGKQAIDFFRALGRAGFML------FGALIGKP-QIRKHFPLLVKQMHVLGVQ 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + +++L     G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GS
Sbjct: 55  SLLIILLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGS 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+P+L+IL     I G S+V 
Sbjct: 115 ALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPVLSILFIAIGIWGGSLVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
             +  +    F+S   ++ + + +I  G IKA F A A+  +A+  G+     S  + + 
Sbjct: 175 VDWKGVDSGSFWSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYDCMPTSEGISQA 234

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAIG 372
            T  VV +  +V+ +D +     F  G
Sbjct: 235 TTRTVVHASLVVLGLDFILTAIMFGAG 261


>gi|145627949|ref|ZP_01783750.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae 22.1-21]
 gi|145632451|ref|ZP_01788186.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae 3655]
 gi|145634244|ref|ZP_01789955.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae PittAA]
 gi|145636462|ref|ZP_01792130.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae PittHH]
 gi|145638100|ref|ZP_01793710.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae PittII]
 gi|148826300|ref|YP_001291053.1| ABC transporter permease [Haemophilus influenzae PittEE]
 gi|229843875|ref|ZP_04464016.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae 6P18H1]
 gi|229846118|ref|ZP_04466230.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae 7P49H1]
 gi|144979724|gb|EDJ89383.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae 22.1-21]
 gi|144987358|gb|EDJ93888.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae 3655]
 gi|145268688|gb|EDK08681.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae PittAA]
 gi|145270287|gb|EDK10222.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae PittHH]
 gi|145272429|gb|EDK12336.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae PittII]
 gi|148716460|gb|ABQ98670.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae PittEE]
 gi|229811122|gb|EEP46839.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae 7P49H1]
 gi|229812869|gb|EEP48557.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae 6P18H1]
 gi|301169827|emb|CBW29431.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Haemophilus influenzae 10810]
 gi|309751266|gb|ADO81250.1| Phospholipid ABC transporter, permease component [Haemophilus
           influenzae R2866]
          Length = 261

 Score =  229 bits (584), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 77/265 (29%), Positives = 135/265 (50%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N    +GK+++ F         +L       G       + +     L++QM+ +GV 
Sbjct: 2   IVNFISALGKQVIDFFRALGRAGFML------FGALIGKP-QIRKHFPLLVKQMHVLGVQ 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + +++L     G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GS
Sbjct: 55  SLLIILLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGS 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+P+L+IL     I G S+V 
Sbjct: 115 ALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPILSILFIAIGIWGGSLVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
             +  +    F+S   ++ + + +I  G IKA F A A+  +A+  G+     S  + + 
Sbjct: 175 VDWKGVDSGSFWSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYDCMPTSEGISQA 234

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV +  +V+ +D +     F 
Sbjct: 235 TTRTVVHASLVVLGLDFILTAIMFG 259


>gi|77166237|ref|YP_344762.1| hypothetical protein Noc_2785 [Nitrosococcus oceani ATCC 19707]
 gi|254435217|ref|ZP_05048724.1| conserved hypothetical protein [Nitrosococcus oceani AFC27]
 gi|76884551|gb|ABA59232.1| Protein of unknown function DUF140 [Nitrosococcus oceani ATCC
           19707]
 gi|207088328|gb|EDZ65600.1| conserved hypothetical protein [Nitrosococcus oceani AFC27]
          Length = 260

 Score =  229 bits (584), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +++           LG      G+   S          LI Q+Y VGV  +P++++  
Sbjct: 3   EALLRLGRWGLGTFERLGRGHLFLGQLLLSIATLLLRFPLLITQVYSVGVLTLPIIVVSG 62

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L  FGAE     ++S+  +RE+G +++A++ AGR+GSA+ AEIG M
Sbjct: 63  AFVGMVLGLQGYNTLVDFGAEESLGVIVSLSLVRELGPVVSALLFAGRAGSALTAEIGLM 122

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++  +  M +D VR + +PR +A   S+PLL  + +   ++G   V      +   
Sbjct: 123 KATEQLSGMEMMAVDPVRRIAAPRFFAGCFSMPLLAAIFSAVGVLGGYFVGVGLLGVDEG 182

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S+  ++     ++  G+IK+      +  +A+ EG+     S+ +G+  T  VV S 
Sbjct: 183 AFWSQMQASTDWKEDVLNGVIKSIVFGIVVTWIAVFEGYDAVPTSDGVGRATTRTVVHSA 242

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 243 FAVLALDFVLTALMFG 258


>gi|17231507|ref|NP_488055.1| hypothetical protein alr4015 [Nostoc sp. PCC 7120]
 gi|17133150|dbj|BAB75714.1| alr4015 [Nostoc sp. PCC 7120]
          Length = 263

 Score =  229 bits (584), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 70/255 (27%), Positives = 120/255 (47%), Gaps = 6/255 (2%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K  +   +     A  LG      G+      + K    +   QM  VG   + + +L +
Sbjct: 5   KSSIGTWSQRLLAAIFLG------GQAIVHLLRGKIHWRNTKEQMAAVGPDSLFIALLTA 58

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              GAV   Q A +   FGA      ++++   RE+  +LTAV++AGR GSA  AEIG+M
Sbjct: 59  VFVGAVFTIQVAREFINFGAGNLVGGVLAVALTRELSPVLTAVILAGRVGSAFAAEIGTM 118

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           ++ E+IDA+  +  D +  L+ PR+ A  + LP+LT+L+  + ++G  I+    Y I   
Sbjct: 119 RVTEQIDAMLMLKTDPIDYLVIPRLLACFLMLPILTLLSLVTGMLGGLIIATNMYGISDT 178

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           VF     +   + +I + +IKA      I I+    G      +  +G+  TT VV ++ 
Sbjct: 179 VFLDSARNLLEIWDICSAMIKACCFGVLIAIIGCSWGLTTTGGAKGVGQSTTTAVVTALL 238

Query: 356 IVIIIDSLFAIFYFA 370
           I+ + +   +   F 
Sbjct: 239 IIFVSNFFLSWVMFQ 253


>gi|37527885|ref|NP_931230.1| hypothetical protein plu4033 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36787321|emb|CAE16405.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 260

 Score =  229 bits (584), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 68/256 (26%), Positives = 119/256 (46%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +      +       G              +       L +Q+Y VGV  + ++I+  
Sbjct: 4   QALAALGRRAIEVFASFGRAGFMLFRAIIGKPEPARQWPLLRQQLYSVGVRSLLIIIVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     +++I  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLILTTYSAEASLGMMVAISLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +I+PR WA  IS+PLL+++     I G ++V   +  I   
Sbjct: 124 KATEQISSLEMMAVDPLRRVIAPRFWAGFISMPLLSLIFVAVGIWGGAMVGVDWKGIDSG 183

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   S      ++    IK+   A  +  +A+  G+     S  + +  T  VV + 
Sbjct: 184 FFWSSMQSAIEWQKDLLNCFIKSVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|193065385|ref|ZP_03046456.1| toluene ABC transporter, permease protein [Escherichia coli E22]
 gi|192927026|gb|EDV81649.1| toluene ABC transporter, permease protein [Escherichia coli E22]
          Length = 260

 Score =  229 bits (584), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++++   
Sbjct: 5   ALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGV 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLT++     I G S+V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGIWGGSLVGVSWKGIDSGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   +      ++   LIK+   A  +  +++  G+     S  + +  T  VV S  
Sbjct: 185 FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGVDFVLTALMFG 259


>gi|116747921|ref|YP_844608.1| hypothetical protein Sfum_0473 [Syntrophobacter fumaroxidans MPOB]
 gi|116696985|gb|ABK16173.1| protein of unknown function DUF140 [Syntrophobacter fumaroxidans
           MPOB]
          Length = 258

 Score =  229 bits (584), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 73/257 (28%), Positives = 127/257 (49%), Gaps = 5/257 (1%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +  Q   LG +    G   A   +  G  LS+++Q+ ++G     V+   +  
Sbjct: 2   IRSLGAYTVVQVGFLGRLGLFLGRMLAGITRPPGKFLSVVKQIQFIGTKSFLVIGFTAIF 61

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG V+A QG + L+  G+E +    +S+  +RE+G +LTA+M+ GR+GSA+ AEIG M+I
Sbjct: 62  TGMVLALQGYYALASVGSEGWLGKAVSLSLIRELGPVLTALMVTGRAGSAMCAEIGIMRI 121

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
           +E+IDAI  M +D    LI+PR+ A +I+LPLLT   +   I+G  +V      +    +
Sbjct: 122 DEQIDAIECMAIDPHSYLITPRLLAALIALPLLTAFCDVVGIVGGYLVGVNLLGVNAGAY 181

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV-----HSNSLGKKVTTCVVQ 352
                S+    +++ G++K+      I  +   +G+  GV         + +  T  VV 
Sbjct: 182 LDSMESSVVWKDVYMGIVKSICFGVLIIWICTYKGYYAGVDENNFGPEQVSRATTNAVVL 241

Query: 353 SISIVIIIDSLFAIFYF 369
           S   +++ D +      
Sbjct: 242 SSISILVCDYVVTSVLL 258


>gi|305664733|ref|YP_003861020.1| organic solvents resistance ABC transporter [Maribacter sp.
           HTCC2170]
 gi|88707855|gb|EAR00094.1| ABC-type transport system involved in resistance to organic
           solvents [Maribacter sp. HTCC2170]
          Length = 264

 Score =  228 bits (583), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 65/246 (26%), Positives = 121/246 (49%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
            ++ +         +G + +    F   + K       L+RQ Y +G   + +V +  F+
Sbjct: 8   TIQSVQKLRQFFVEIGELSNFAMRFFKEALKPPYEFKELLRQCYNMGNRSLVLVGVTGFI 67

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  Q    L +FGA  +  +++ I  +REIG ++TA++ AGR  S I AE+GSM++
Sbjct: 68  IGLVLTLQSRPTLIEFGAVSWMPNMVGISIVREIGPVITALICAGRIASGIGAELGSMRV 127

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+   G +  + L+  RI A  + LPLL I  +  A+ G+++V     ++ F ++
Sbjct: 128 TEQIDAMEVSGTNPFKYLVVTRIMATTLMLPLLVIFGDLVALYGSALVENLKGNVSFQLY 187

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
           F+         ++    IK+ F    IG+V   +G+     +  +G    T VV +  ++
Sbjct: 188 FNTVFDALEFGDLIPATIKSFFFGFTIGLVGCYKGYYSKKGTAGVGVAANTAVVLASLLL 247

Query: 358 IIIDSL 363
             +D +
Sbjct: 248 FFVDFI 253


>gi|16330753|ref|NP_441481.1| hypothetical protein slr1344 [Synechocystis sp. PCC 6803]
 gi|1653246|dbj|BAA18161.1| slr1344 [Synechocystis sp. PCC 6803]
          Length = 283

 Score =  228 bits (583), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 67/249 (26%), Positives = 120/249 (48%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           + +  S     G  I   G      +  K    +  +Q+ +VG + +P+ ++ + V G +
Sbjct: 24  LAELSSWLRRSGQAILLLGNTSFQLFTGKIDGRNTTQQLMFVGPASLPITLITAAVIGMI 83

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
              Q A +   FGA      ++ +   RE+  ++TAV++AGR GSA  AEIG+M++ E+I
Sbjct: 84  FTIQVAREFLAFGAGSAVGGILMLALGRELCPIMTAVVVAGRVGSAFAAEIGTMRVTEQI 143

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  +  + V  L+ PR+ A  I +P L++LA  + ++G +++    Y I   VFF   
Sbjct: 144 DALYMLNTNPVEYLVIPRLLACCIMVPTLSVLALVTGMMGGAVISSNVYGIANQVFFESI 203

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            +  T  +IF G +K       I I+    G      +  +G+  T  VV S+  + + +
Sbjct: 204 QTFVTPWDIFCGPVKGIVFGVLIAIIGCNWGLTTRGGAKGVGESTTAAVVTSLLAIFVSN 263

Query: 362 SLFAIFYFA 370
            L +   F 
Sbjct: 264 FLMSWIMFQ 272


>gi|304310283|ref|YP_003809881.1| Toluene tolerance ABC efflux transporter, permease [gamma
           proteobacterium HdN1]
 gi|301796016|emb|CBL44220.1| Toluene tolerance ABC efflux transporter, permease [gamma
           proteobacterium HdN1]
          Length = 260

 Score =  228 bits (583), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 66/256 (25%), Positives = 128/256 (50%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + + +   D       +G           +    +     L++Q+Y +GV  + ++++  
Sbjct: 3   EWLRRIGADGLGTLRTIGAAGIFLFNALWALPNPRSGTPLLVKQIYSIGVLSLVIIVVSG 62

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L+QFG+E     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M
Sbjct: 63  VFIGMVLALQGYHILTQFGSEEALGQLVALSLLRELGPVVAALLFAGRAGSALTAEIGLM 122

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ +   +G+D +R +I+PR WA  I +P L ++ +   +IGA +V  K+  +   
Sbjct: 123 KATEQLASFEMIGVDPLRRIIAPRFWAGFICMPTLAVIFSAVGVIGAYLVGVKWLGVYDG 182

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F++   ++     ++  G+IK+      +  +A+ +G+     S  + +  T  VV S 
Sbjct: 183 SFWANMQNSVEWGEDVVNGVIKSFAFGAVVTWIAVFQGYDCIPTSEGISRATTRTVVFSS 242

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 243 LAVLGLDFILTAVMFG 258


>gi|85058184|ref|YP_453886.1| hypothetical protein SG0206 [Sodalis glossinidius str. 'morsitans']
 gi|84778704|dbj|BAE73481.1| conserved hypothetical protein [Sodalis glossinidius str.
           'morsitans']
          Length = 260

 Score =  228 bits (583), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 67/258 (25%), Positives = 124/258 (48%), Gaps = 1/258 (0%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           + + I  F     +  H  G                +     L++++Y VGV  + ++++
Sbjct: 2   VREAIASFGRRGINICHGFGRAGVMLFNALIGKPALREQWPLLVKKLYGVGVLSLVIIMV 61

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
                G V+  QG   L+ + AE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG
Sbjct: 62  SGLFIGMVLGLQGYIILTTYSAESSLGMLVALSLLRELGPVVTALLFAGRAGSALTAEIG 121

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
            MK  E++ ++  M +D +R +++PR WA +IS+PLLT +     I G ++V  ++  I 
Sbjct: 122 LMKATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLTAIFVAVGIWGGAVVGVEWKGID 181

Query: 294 FAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
              F+S          ++   +IK+   A  +  +A+  G+     S  + +  T  VV 
Sbjct: 182 SGFFWSAMQGAVDWRQDLVNCVIKSVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVH 241

Query: 353 SISIVIIIDSLFAIFYFA 370
           +   V+ +D +     F 
Sbjct: 242 ASLAVLGLDFVLTALMFG 259


>gi|261416607|ref|YP_003250290.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373063|gb|ACX75808.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 354

 Score =  228 bits (583), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 81/353 (22%), Positives = 155/353 (43%), Gaps = 16/353 (4%)

Query: 21  SEIADDVVMAINKSIQSDSAIVDLSAITEIDT---IGAELIMYFMEKYHGKIKLQGVSTH 77
           +  +  ++ +   ++      +D S++  +D        L+    EK   K+ L+     
Sbjct: 14  AANSKKLLSSCKSALTKGELHLDGSSLASMDYSADAFFALLAELSEKTGNKLVLEHFPPE 73

Query: 78  IEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVIS 137
           I+Q    +    RK +  +KPQR        N+   +G      + +      +L L+ +
Sbjct: 74  IKQHLQNL----RKMVPPEKPQRE-----TNNILEMMGGAGFSLLKEV---FEVLVLLFT 121

Query: 138 NTGEFCASSY-KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE 196
                    + K K     + +QM+  G   + +  L   +    +A Q +  L+  G  
Sbjct: 122 AIYWTIVGPFDKGKIHFGGITKQMFKSGSEAMGICFLFVGLICLTMALQSSVMLNAVGGG 181

Query: 197 IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILI 256
            +    +  L   EIG LLT +++AGRSGSA+ AEI +M + EE+ A+++M +  V+ L+
Sbjct: 182 SYLASGLGFLIFAEIGPLLTTIILAGRSGSAMAAEIANMSVCEEVKALKSMAIPPVQYLV 241

Query: 257 SPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316
            PR  AL I+ P+L+  A+        ++ + + DI F+ +                 IK
Sbjct: 242 VPRFIALSITTPILSFSASIVGSFAGFLIAYFFCDISFSNYMMGLRDGIDPMTFLKSTIK 301

Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           A      + ++A  +G      + ++GK  T+ VV +I  ++I D+LFA  ++
Sbjct: 302 ALVFGWIVTLIACNKGLNAHGGAEAVGKATTSSVVAAICTIVISDTLFAFIFY 354


>gi|311695326|gb|ADP98199.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [marine bacterium HP15]
          Length = 260

 Score =  228 bits (583), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 66/255 (25%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           +I  F           G              +       L++Q+Y VGV  + +V++   
Sbjct: 4   RIAAFGRLGLDIVSSFGRSGRFLAGVLGGVPRPATGFPLLMKQIYAVGVLSLAIVVVSGL 63

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   LS +G+E     ++++  +RE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 64  FIGMVLGLQGYTILSDYGSEAAIGQMIALTLVRELGPVVTALLFAGRAGSALTAEIGLMK 123

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  MG+D +R +I+PR+WA  I++P+L ++ +   I G  +V   +  +    
Sbjct: 124 ATEQLSSMEMMGVDPLRRVIAPRLWAGFIAMPVLAVIFSVVGIWGGMLVGVDWLGVFEGS 183

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+    S+     ++  G+IK+         +A+ +G+     S  +    T  VV S  
Sbjct: 184 FWGNMQSSVDFVDDVLNGVIKSVVFGFVCAWIAVYQGYDCVPTSAGISSATTKTVVYSSL 243

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 244 AVLGLDFVLTAVMFG 258


>gi|251793143|ref|YP_003007871.1| ABC transporter permease [Aggregatibacter aphrophilus NJ8700]
 gi|247534538|gb|ACS97784.1| conserved ABC-type transport system protein, permease component
           [Aggregatibacter aphrophilus NJ8700]
          Length = 261

 Score =  228 bits (583), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 78/265 (29%), Positives = 132/265 (49%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N    +G+  + F         +L       G         K F L  I+Q++ +GV 
Sbjct: 2   LVNFISALGRNTINFGRALGRAGFLL------FGALVGKPQVSKHFPL-FIKQLHVLGVQ 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + +++L     G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GS
Sbjct: 55  SLLIIMLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGS 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++ ++  M +D +R +I+PR WA II++P+L+I+     I G S+V 
Sbjct: 115 ALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGIIAMPILSIIFIAIGIWGGSLVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
             +  +    F+S   ++ T   +I  G IK+ F A A+  +A+  G+     S  + K 
Sbjct: 175 VDWKGVDAGSFWSVMQNSVTWGHDILNGSIKSLFFAIAVVWIALFNGYDCIPTSEGISKA 234

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV +  +V+ +D +     F 
Sbjct: 235 TTRTVVHASLVVLGLDFVLTAIMFG 259


>gi|281356267|ref|ZP_06242760.1| protein of unknown function DUF140 [Victivallis vadensis ATCC
           BAA-548]
 gi|281317636|gb|EFB01657.1| protein of unknown function DUF140 [Victivallis vadensis ATCC
           BAA-548]
          Length = 272

 Score =  228 bits (583), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 68/268 (25%), Positives = 136/268 (50%), Gaps = 2/268 (0%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
           +    S K L   +    +   +D C        +   T +      K + +   +   M
Sbjct: 3   ARSPRSLKQLCIEVADSAIALRDDLCLFCTFSRQLGKATLDAIRHPRKIRRY--DVYYYM 60

Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
              G   +P++ L+ F+ G ++A Q   QL +FG E + ++L+  + + E+  L+TAV++
Sbjct: 61  DNCGSDAMPIIALLGFLIGVILAFQAIVQLRRFGVESYVVNLVGTVIVTELAPLVTAVVL 120

Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280
           AGR+GS+  AE+G+MK +EEIDA+ TMG D  R L+ P++ AL++ +P LTI+++   I 
Sbjct: 121 AGRTGSSFAAELGTMKADEEIDAMVTMGFDPGRFLLFPKMLALLLIMPGLTIISDVCGIA 180

Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
           G  +++     +    + ++        ++  GL+K+   A  +  +   +G     ++ 
Sbjct: 181 GGMVIVCSMLQVSTGEYLTKTFEIIQPIDLAQGLVKSFVFAVIVAGIGCMKGLNAERNAQ 240

Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFY 368
            +G+  T+ VV SI ++++ D++    +
Sbjct: 241 GVGRSATSAVVTSIFLIVVTDAILTSCF 268


>gi|239994339|ref|ZP_04714863.1| putative transport protein (ABC superfamily, membrane) [Alteromonas
           macleodii ATCC 27126]
          Length = 258

 Score =  228 bits (583), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 71/264 (26%), Positives = 131/264 (49%), Gaps = 9/264 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
                IG K +  +      A +L   +                   +I+Q+Y VGV  +
Sbjct: 2   KFFQSIGAKTIGKVTAVGRAALMLFGALIAVPRLKNVPL--------VIKQLYVVGVQSL 53

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++++     G V+A QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+
Sbjct: 54  LIIMVSGLFIGMVMALQGYTILVDYGAEGSLGPMVALSLLRELGPVVTALLFAGRAGSAL 113

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG MK  E++ ++  M +D +R +++PR WA ++++P+L I+ +   I+G  +V   
Sbjct: 114 TAEIGLMKATEQLSSLEMMAVDPLRRIVAPRFWAGMLAMPMLAIIFSAIGILGGHLVGVD 173

Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +    ++S   ST     ++  G+IK+   A  +  +A+ +G+     S  + K  T
Sbjct: 174 WLGVDAGSYWSIMQSTVDWNQDVINGVIKSLVFALVVTWIAIFKGYDSIPTSEGISKATT 233

Query: 348 TCVVQSISIVIIIDSLFAIFYFAI 371
             VV S   V+ +D +     F I
Sbjct: 234 ETVVYSSLAVLGLDFVLTALMFGI 257


>gi|283779915|ref|YP_003370670.1| hypothetical protein Psta_2136 [Pirellula staleyi DSM 6068]
 gi|283438368|gb|ADB16810.1| protein of unknown function DUF140 [Pirellula staleyi DSM 6068]
          Length = 289

 Score =  228 bits (583), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 65/266 (24%), Positives = 121/266 (45%)

Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
               +   +  ++  +          +G +        +          +L+   Y VGV
Sbjct: 12  PPAGILQSLADQVTDWGAVVVDGLITIGDLTIFAMRTISWMLFKLPRRETLLPNFYQVGV 71

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             +PV+ L     G V+A Q  F     G E     ++++  +RE+G +L A M+AGR G
Sbjct: 72  LSLPVIALTGTFIGMVLAVQSYFTFRDLGLETRMGAVINMTLVRELGPVLAATMLAGRVG 131

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
            A+ AE+G+M++ E+IDA+ +MG D +  L+ PR  A +  +P LTI+A+F  ++G    
Sbjct: 132 CAMAAELGTMRVTEQIDALESMGADPIYYLVVPRFLACLFLIPTLTIMADFMGVVGGYFY 191

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                 I    ++          ++F+G++K+ F   AI +V+   GF     +  +G+ 
Sbjct: 192 STVVLSIDKHHYWYNSEQFVGNFDLFSGILKSLFFGAAIAVVSCYRGFHCTPGAEGVGRA 251

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAI 371
            T   V S  ++++ID       + +
Sbjct: 252 ATAAFVHSFVLILVIDLFLGKMLYTL 277


>gi|33594617|ref|NP_882261.1| hypothetical protein BP3758 [Bordetella pertussis Tohama I]
 gi|33564693|emb|CAE44015.1| putative membrane protein [Bordetella pertussis Tohama I]
          Length = 261

 Score =  228 bits (582), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 63/261 (24%), Positives = 128/261 (49%), Gaps = 8/261 (3%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170
              +G  +   I         LG +++ +G               + +Q++++G   + +
Sbjct: 7   LNGLGGWVRGQIGGIGYFTRFLGALLARSGIAVRRP-------GLVSQQVHFIGNYSLLI 59

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           + +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ A
Sbjct: 60  IAVSGLFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTALLFAGRAGTSLTA 119

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           EIG MK  E++ A+  M +D +R ++ PR W  II++P+L  + +   I+G  IV     
Sbjct: 120 EIGLMKAGEQLSAMEVMAVDPMRRVLVPRFWGGIIAMPVLAAVFSMVGILGGWIVGVLMI 179

Query: 291 DIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            +    F+S+  +    L ++  G+IK+      + +VA+ EG+        +G+  T  
Sbjct: 180 GVDAGAFWSQMQNGVDVLDDVLNGVIKSLVFGVTVTLVALYEGWQARPTPEGVGRATTRT 239

Query: 350 VVQSISIVIIIDSLFAIFYFA 370
           VV     V+ +D +     F 
Sbjct: 240 VVVGSLAVLGLDFILTALMFG 260


>gi|68249643|ref|YP_248755.1| ABC transporter permease [Haemophilus influenzae 86-028NP]
 gi|68057842|gb|AAX88095.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae 86-028NP]
 gi|309973443|gb|ADO96644.1| Phospholipid ABC transporter, permease component [Haemophilus
           influenzae R2846]
          Length = 261

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 77/265 (29%), Positives = 136/265 (51%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N    +GK+++ F         +L       G       + +     L++QM+ +GV 
Sbjct: 2   IVNFISALGKQVIDFFRALGRAGFML------FGALIGKP-QIRKHFPLLVKQMHVLGVQ 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + +++L     G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GS
Sbjct: 55  SLLIILLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGS 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+P+L+IL     I G+S+V 
Sbjct: 115 ALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPILSILFIAIGIWGSSLVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
             +  +    F+S   ++ + + +I  G IKA F A A+  +A+  G+     S  + + 
Sbjct: 175 VDWKGVDSGSFWSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYDCMPTSEGISQA 234

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV +  +V+ +D +     F 
Sbjct: 235 TTRTVVHASLVVLGLDFILTAIMFG 259


>gi|303327746|ref|ZP_07358186.1| thioredoxin family protein [Desulfovibrio sp. 3_1_syn3]
 gi|302862107|gb|EFL85041.1| thioredoxin family protein [Desulfovibrio sp. 3_1_syn3]
          Length = 267

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 74/266 (27%), Positives = 132/266 (49%), Gaps = 12/266 (4%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
                +G+  ++ I+        +   ++  G+   S+  F   L    +Q+Y +G   +
Sbjct: 9   GFLRLLGRPCLRGIDAVGGMTLFM---LAGLGQIFTSARIFPRSL----QQIYVIGYKSL 61

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            V++LI    G V+  QG + L QFG+       +S+  +RE+G +LTA+M+ GR+GS++
Sbjct: 62  FVILLIGIFCGMVLGLQGYYTLIQFGSVGMLGSAVSLTLIRELGPVLTAIMLTGRAGSSM 121

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG M+I ++IDA+  M ++ +  L+SPR+ A +IS PLLT + +   I+G  +    
Sbjct: 122 AAEIGVMRITDQIDALDVMDINSLGYLVSPRLVAALISFPLLTAIFDVIGILGGYLTGVL 181

Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLG 343
              I    +F R  S+ T+ +I  G +KA      +  V   +G+        V   ++G
Sbjct: 182 MLGINEGAYFYRIASSVTMTDISGGFVKALVFGLLVTTVCCHQGYYTHRRRDSVGPEAVG 241

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYF 369
              T+ VV S  +++  D +   F  
Sbjct: 242 NATTSAVVISCVLILAADYVLTSFLL 267


>gi|56459515|ref|YP_154796.1| ABC-type transport system involved in resistance to organic
           solvents, permease [Idiomarina loihiensis L2TR]
 gi|56178525|gb|AAV81247.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Idiomarina loihiensis
           L2TR]
          Length = 259

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 67/254 (26%), Positives = 122/254 (48%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I             +G  ++          +        I+QMY VGV  + +VI+    
Sbjct: 5   IRSVGRQVLDSLAGIGYALAMLMGAIIGKPQPAKSWPLFIKQMYVVGVLSMLIVIVSGLF 64

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L  +GAE     ++++  LRE+G ++T ++ AGR+GSA+ AEIG MK 
Sbjct: 65  IGMVLGLQGYTILVDYGAEQSLGPMVALSLLRELGPVVTGLLFAGRAGSALTAEIGLMKA 124

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +I+PR WA ++S+PLL ++ +   I G  +V   +  +    F
Sbjct: 125 TEQLSSLEMMAVDPLRRVIAPRFWAGVVSMPLLALMFSAVGIYGGYLVGSGWLGVDEGAF 184

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   S      ++  G+IK+   A  +  +A+ +G+     S  +    T+ VV +   
Sbjct: 185 WSVMQSAVDWQDDLLNGIIKSIVFAFVVTWIALYKGYRSVPTSAGISAATTSTVVTASLA 244

Query: 357 VIIIDSLFAIFYFA 370
           ++ +D +     F 
Sbjct: 245 ILGLDFILTAIMFG 258


>gi|78064990|ref|YP_367759.1| ABC transporter, inner membrane subunit [Burkholderia sp. 383]
 gi|77965735|gb|ABB07115.1| ABC transporter, inner membrane subunit [Burkholderia sp. 383]
          Length = 255

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 58/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +     +   ++                   + +Q++++G     
Sbjct: 1   MISAIGRYVIGGLERTGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D ++ +I+PR+WA II++PLL  + N   ++G   V    
Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKNVIAPRMWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+      +  ++  G++K+     A+  +A+ +G+        + +  T 
Sbjct: 174 IGVDPGAFWSQMQGGVQVWADVGNGVLKSIVFGFAVTFIALYQGYEAKPTPEGVSRATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255


>gi|218439944|ref|YP_002378273.1| hypothetical protein PCC7424_3003 [Cyanothece sp. PCC 7424]
 gi|218172672|gb|ACK71405.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7424]
          Length = 264

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 64/239 (26%), Positives = 115/239 (48%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           L   I   G+      K K    + + QM  VG   + + ++ +   G V   Q + +  
Sbjct: 18  LSAAILLGGQVFLHLLKNKIHHRNTLDQMAIVGPESLTISLVTAAFVGMVFTIQVSREFI 77

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            FGA  +   ++S+   RE+  +LTAV++AGR GSA  AEIG+M++ E+IDA+  +  D 
Sbjct: 78  YFGAGSYVGGVLSLALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQIDALYMLKTDP 137

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           +  L+ PR+ A  + LP+LT+L+  + I G   V    Y+I   VF +   +     ++ 
Sbjct: 138 IDYLVIPRVLACSLMLPILTVLSLLTGIAGGIAVAESLYNISPVVFLNSARNFLQTWDLV 197

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           + +IK+      I ++    G      +  +G+  TT VV ++  + + +   +   F 
Sbjct: 198 SCMIKSGIFGSLIAVIGCSWGLTTSGGAKGVGQSTTTAVVTALLAIFVANFFLSWLMFQ 256


>gi|159029293|emb|CAO90159.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 264

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 63/239 (26%), Positives = 116/239 (48%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG      G+        K    + + QM  VG   + + ++ +   G V   Q A +  
Sbjct: 18  LGAAGLLAGQTFLHILNGKIHRRNTLEQMSIVGPESLTIALITAAFVGMVFTIQVAREFI 77

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            FGA  F   ++S+   RE+  +LTAV++AGR GSA  AEIG+M++ E+IDA+  +  D 
Sbjct: 78  FFGAGSFVGGVLSLALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQIDALYILKTDP 137

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           +  L+ PR+ A  + LPLLTI++  + ++G  ++    Y + +++F     +     ++ 
Sbjct: 138 IDYLVIPRVIACSLMLPLLTIISLVTGLLGGLLISDSLYGVSYSLFLQSAQNFLQTWDLI 197

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           + ++K+      I I+    G      +  +G+  TT VV S+  + + +   +   F 
Sbjct: 198 SSMLKSLIFGILIAIIGCSWGLTTTGGAKGVGQSTTTAVVTSLLAIFVANFFLSWLMFQ 256


>gi|218550477|ref|YP_002384268.1| toluene ABC transporter membrane protein [Escherichia fergusonii
           ATCC 35469]
 gi|218358018|emb|CAQ90664.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia fergusonii ATCC 35469]
 gi|324115202|gb|EGC09166.1| inner membrane protein yrbE [Escherichia fergusonii B253]
 gi|325498775|gb|EGC96634.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia fergusonii ECD227]
          Length = 260

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 74/255 (29%), Positives = 123/255 (48%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +  F     +     G              +F+     LIRQ+Y VGV  + ++I+   
Sbjct: 5   ALAAFGRKGITTLRTFGRAGLMLFNAIVGKPEFRKHTPLLIRQIYNVGVLSMLIIIVSGV 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLTI+     I G S+V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   +      ++   LIK+   A  +  +A+  G+     S  + +  T  VV +  
Sbjct: 185 FWSAMQNAVDWRLDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|283788167|ref|YP_003368032.1| putative organic solvent tolerance protein [Citrobacter rodentium
           ICC168]
 gi|282951621|emb|CBG91321.1| putative organic solvent tolerance protein [Citrobacter rodentium
           ICC168]
          Length = 260

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++++   
Sbjct: 5   ALATLGHKGIKTVSTFGRAGLMLFNALVGKPEFRKHTPLLVRQLYNVGVLSMLIILVSGV 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLTIL     I G S+V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTILFVAVGIWGGSLVGVSWKGIDAGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   +      ++   LIK+   A  +  +A+  G+     S  + +  T  VV S  
Sbjct: 185 FWSAMQNAVDWRLDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|85858103|ref|YP_460305.1| organic solvents resistance ABC transporter permease [Syntrophus
           aciditrophicus SB]
 gi|85721194|gb|ABC76137.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Syntrophus aciditrophicus
           SB]
          Length = 284

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 80/290 (27%), Positives = 142/290 (48%), Gaps = 13/290 (4%)

Query: 84  LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFC 143
            ++     +  +++                +G+ ++ +IN+S       G          
Sbjct: 2   TVAMRPDIQESSEEKAGWNAIRLLSWPFAQLGRSVISWINNS-------GAAAIFLLLAA 54

Query: 144 ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203
              ++ +  L+ + +Q+YY+G     +++L+   TG V+  Q    L Q GAE     L+
Sbjct: 55  LKIFRPRQ-LMKITQQIYYIGARSTMIIMLVGLFTGMVLGLQSYHALVQVGAEGALGTLV 113

Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263
           ++  +RE+G +LTA+MI  R+GSAI A+IG  +I+E+IDA+ TM +D +R LISPRI A 
Sbjct: 114 ALSLIRELGPVLTAIMITARAGSAITAQIGIERISEQIDALDTMHIDPLRYLISPRIAAA 173

Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323
           IIS P+LT L +   I+G+ I            FF R  S+  ++++  G IKA   A  
Sbjct: 174 IISFPVLTALFDLIGILGSYISGVLIMGANAGTFFHRVQSSVEMSDVNEGFIKAIVFAVI 233

Query: 324 IGIVAMKEGFAVGV-----HSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +  V   +G+   +      + ++G   T+ VV S  ++++ D +     
Sbjct: 234 VSTVCCYQGYFAHMRPDSHGAKAVGLSTTSAVVLSCVLILVSDYVVTSLL 283


>gi|254497755|ref|ZP_05110528.1| toluene tolerance protein Ttg2B [Legionella drancourtii LLAP12]
 gi|254353048|gb|EET11810.1| toluene tolerance protein Ttg2B [Legionella drancourtii LLAP12]
          Length = 260

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 65/265 (24%), Positives = 126/265 (47%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
                  +G +  + ++D  +    L  ++                   L  Q+Y+VGV 
Sbjct: 1   MLEFITRLGNRGTRVLHDLGTSGLFLFFMLF-------RRPNISRLWPLLCHQIYFVGVL 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
              ++++ +   G V+  QG   L +FGA      L+++   RE+G +++A++ AGR+GS
Sbjct: 54  SCLIIVVSALFIGMVVGLQGYNTLQKFGASSQLGQLLALSISRELGPVISALLFAGRAGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++ ++  MG+D +  +I PR  A  I+LP+L+++ +  AI+G   + 
Sbjct: 114 ALTAEIGLMKTTEQLSSMDMMGVDPLGRVIYPRFMAGFITLPVLSLIFSAVAILGGYFIG 173

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
             +  +    F+S   +      ++ +G+IK+   A  +  +A+ +GF     +  + + 
Sbjct: 174 VHWLGVDAGSFWSNMQAAVNFRIDVLSGIIKSLVFAFVVTWIAVFQGFECVPTAEGISQA 233

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV S   V+ +D L       
Sbjct: 234 TTKTVVYSSLAVLGLDFLLTAMMIG 258


>gi|113476613|ref|YP_722674.1| hypothetical protein Tery_3053 [Trichodesmium erythraeum IMS101]
 gi|110167661|gb|ABG52201.1| protein of unknown function DUF140 [Trichodesmium erythraeum
           IMS101]
          Length = 249

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 74/237 (31%), Positives = 119/237 (50%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
                 G+     +  K +  + I QM  VG   + +V+L +   G V   Q A +L  F
Sbjct: 3   AATYLAGQVFVHLFHGKIYRRNTIEQMAIVGPESLLIVLLTASFVGMVFTIQVARELVAF 62

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           G       ++++   RE+G +LTAV++AGR GSA  AEIG+MK+ E+IDA+  +  D V 
Sbjct: 63  GTANMVGGMLALTLSRELGPVLTAVVVAGRVGSAFAAEIGTMKVTEQIDALYILKTDPVD 122

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            L+ PR+ A  + +P+LT+L   +AI G  I+    YDIP +++     S  TL ++ +G
Sbjct: 123 YLVIPRVIACGVMMPILTLLCLVAAIFGGLIIAVNLYDIPQSMYIDSVRSFLTLWDLCSG 182

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           L K+      I ++    G      +  +GK  TT VV S+  + I +   +   F 
Sbjct: 183 LTKSVVFGVLIAVIGTSWGLTTTGGAKGVGKSTTTAVVTSLISIFIFNFFLSWAMFQ 239


>gi|209964880|ref|YP_002297795.1| ABC transporter permease protein, putative [Rhodospirillum centenum
           SW]
 gi|209958346|gb|ACI98982.1| ABC transporter permease protein, putative [Rhodospirillum centenum
           SW]
          Length = 256

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 63/253 (24%), Positives = 123/253 (48%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +       G +   T    +   +   +L  + RQM  +G   +PVV L +  
Sbjct: 4   IAGIGRATLVFMEATGRLALFTAIALSHCLRPPFYLRHIGRQMIDIGYYSLPVVGLTALF 63

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG V+A Q     S+F AE     ++ +   RE+G +L  +M+AGR G+A+ AE+G+M++
Sbjct: 64  TGMVLALQSYSGFSRFEAESAIATVVVLSITRELGPVLAGLMVAGRIGAAMAAELGTMRV 123

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++DA+ T+  +  + L+ PR+ A  + LPLL ++A+   + G  +V     +     +
Sbjct: 124 TEQVDALTTLSTNPFKYLVVPRLLAGTLMLPLLVLVADIIGVFGGFLVGVYRLNFNAGGY 183

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            +       + ++ +GL+KA     AI ++    G+     +  +G   T  VV +  ++
Sbjct: 184 ITSTWKYLEVMDVVSGLVKAGAFGFAISLMGCYHGYHSRGGAQGVGAATTNAVVSASILI 243

Query: 358 IIIDSLFAIFYFA 370
           ++++ L    +F+
Sbjct: 244 LVLNYLLTGIFFS 256


>gi|149194581|ref|ZP_01871677.1| abc transporter, permease protein [Caminibacter mediatlanticus
           TB-2]
 gi|149135325|gb|EDM23805.1| abc transporter, permease protein [Caminibacter mediatlanticus
           TB-2]
          Length = 259

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 70/263 (26%), Positives = 115/263 (43%), Gaps = 7/263 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
              L  +IG   +  I            ++          Y+ K     L  Q+Y++G  
Sbjct: 2   LLKLLDNIGTFTLNLIKGFGDFTLFQFNILKLI---FTPPYRIK----ELFNQIYFMGYG 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + V+ L SF TG V A Q      +FG E F    + I  ++E+G +  ++M+  R  S
Sbjct: 55  SLGVIFLTSFFTGLVEAVQLYNGFHKFGVEDFMGYTIFISIVKELGPVFASLMVISRGIS 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A  AE+GSMK+ E+IDA+  M ++  + LI PRI A IISLPLL +  +  + IGA ++ 
Sbjct: 115 AYAAELGSMKVTEQIDALEVMAVNSKQYLIVPRILATIISLPLLILFFDAVSNIGAYLIS 174

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
                +    +         + +I  G+IK       I  +    G+     +  +G+  
Sbjct: 175 TYSLGVNGFAYLDHIRQFGEIRDIIEGVIKGAVFGYIISAIGTYIGYNTRGGAKGVGQST 234

Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369
           T  VV S   V + D + +  + 
Sbjct: 235 TKAVVYSSVAVFVADYVLSAIFL 257


>gi|332140253|ref|YP_004425991.1| putative transport protein (ABC superfamily, membrane) [Alteromonas
           macleodii str. 'Deep ecotype']
 gi|327550275|gb|AEA96993.1| putative transport protein (ABC superfamily, membrane) [Alteromonas
           macleodii str. 'Deep ecotype']
          Length = 258

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 69/248 (27%), Positives = 130/248 (52%), Gaps = 2/248 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           +  +   +G           +  + K   L+ I+Q+Y VGV  + ++++     G V+A 
Sbjct: 11  TIGKITAIGRAALMLFGALIAIPRAKNIPLT-IKQLYVVGVQSLLIIMVSGLFIGMVMAL 69

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK  E++ ++
Sbjct: 70  QGYTILVDYGAEGSLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSL 129

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D +R +++PR WA ++++P+L I+ +   I+G  +V   +  +    ++S   ST
Sbjct: 130 EMMAVDPLRRIVAPRFWAGMLAMPMLAIIFSAIGILGGHLVGVDWLGVDAGSYWSIMQST 189

Query: 305 ATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                ++  G+IK+   A  +  +A+ +G+     S  + K  T  VV S   V+ +D +
Sbjct: 190 VDWNQDVINGVIKSLVFALVVTWIAIFKGYDSIPTSEGISKATTETVVYSSLAVLGLDFV 249

Query: 364 FAIFYFAI 371
                F I
Sbjct: 250 LTALMFGI 257


>gi|170731749|ref|YP_001763696.1| hypothetical protein Bcenmc03_0394 [Burkholderia cenocepacia MC0-3]
 gi|254246538|ref|ZP_04939859.1| hypothetical protein BCPG_01288 [Burkholderia cenocepacia PC184]
 gi|124871314|gb|EAY63030.1| hypothetical protein BCPG_01288 [Burkholderia cenocepacia PC184]
 gi|169814991|gb|ACA89574.1| protein of unknown function DUF140 [Burkholderia cenocepacia MC0-3]
          Length = 255

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 58/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +     +   ++                   + +Q++++G     
Sbjct: 1   MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D ++ +I+PR+WA II++PLL  + N   ++G   V    
Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKNVIAPRMWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+      +  ++  G++K+     A+  +A+ +G+        + +  T 
Sbjct: 174 IGVDPGAFWSQMQGGVQVWADVGNGVLKSIVFGFAVTFIALYQGYEAKPTPEGVSRATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255


>gi|10086491|gb|AAG12551.1|AC007797_11 Hypothetical Protein [Arabidopsis thaliana]
          Length = 283

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 55/232 (23%), Positives = 113/232 (48%)

Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198
            G+      K K    + ++Q+   G   + V +L S   G     Q   + ++ G    
Sbjct: 42  AGQVVLRILKGKIHWRNTLQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFTRLGLNRS 101

Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258
              ++++   RE+  ++T++++AGR GSA  AE+G+M+++E+ D +R +G D +  LI+P
Sbjct: 102 IGGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADPIDYLITP 161

Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318
           R+ A  ++LP LT++     +  ++++    Y I   +     H      +I + +IK+ 
Sbjct: 162 RVIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMDSAHRALRPWDIVSAMIKSQ 221

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                I +++   G      +  +G+  T+ VV S+  + I D + + F+F 
Sbjct: 222 VFGAIISVISCSWGVTTTGGAKGVGESTTSAVVMSLVGIFIADFVLSSFFFQ 273


>gi|206890273|ref|YP_002248716.1| toluene tolerance protein Ttg2B [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206742211|gb|ACI21268.1| toluene tolerance protein Ttg2B [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 256

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 70/260 (26%), Positives = 127/260 (48%), Gaps = 7/260 (2%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
               IG+  ++           L   + +        +KF+ FL    RQ+ + G   + 
Sbjct: 4   FIKFIGRYSIELFVFLGKMFIFL---VDSIYYIFIPPFKFRNFL----RQVRFFGNKSMI 56

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           VVI     +G V+A QG + L++FGAE     ++++  +RE+G +L A+M+ GR+GSA+ 
Sbjct: 57  VVIFTGAFSGMVLALQGYYALNKFGAEALLGPVVALSLIRELGPVLCALMVTGRAGSAVT 116

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG M+I E+IDA+  M ++ ++ ++ P I A I++ PLLT + +   I G  +V    
Sbjct: 117 AEIGIMRITEQIDALTVMAVNPMKYVVVPNILAGIVAFPLLTAVFDVIGIYGGYLVSVHA 176

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
             +    +FS+      + +I  GL K+      +  +    G+  G  +  + +  T  
Sbjct: 177 LGLSEGTYFSQMELYVDMEDIRIGLYKSLSFGLLVTWICTFMGYTSGYGARGVSRATTNA 236

Query: 350 VVQSISIVIIIDSLFAIFYF 369
           VV S  ++++ D +   F  
Sbjct: 237 VVLSSVVILLWDYMLGAFLL 256


>gi|239906932|ref|YP_002953673.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
 gi|239796798|dbj|BAH75787.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
          Length = 269

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 75/271 (27%), Positives = 141/271 (52%), Gaps = 12/271 (4%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
            +   +    +G+  ++F+ +       LG +   T +              +++Q+Y++
Sbjct: 6   LSVLLSPATALGRVTLRFVAE-------LGGLFLFTLQGLWRILVPAPSWSKIVQQVYFI 58

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           GV  + V+ LI   TG V+  QG + L +FG+E      +++  +RE+G +LTA+MI GR
Sbjct: 59  GVKSIFVIALIGLFTGMVLGLQGYYTLVKFGSEGLLGAAVALSIIRELGPVLTAIMITGR 118

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           +GS++ AE+G M+I+E+IDA+ TM ++ +R L++PR+ A +I  PLLT + +   I+G  
Sbjct: 119 AGSSMAAELGIMRISEQIDALSTMDINPMRFLVAPRLAASLICFPLLTAIFDVVGILGGY 178

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVH 338
           +       I   V+F R  +T  LA++  G +K+   A  + ++   EG+       G  
Sbjct: 179 LSGCVLLGINPGVYFDRIDATVELADVTGGFVKSVVFALLVAVICCYEGYFTHARQGGFG 238

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           +  +    T+ VV S  ++++ D +   F  
Sbjct: 239 AKGVSLATTSAVVLSCVVILVADYVLTSFLL 269


>gi|33598744|ref|NP_886387.1| hypothetical protein BPP4258 [Bordetella parapertussis 12822]
 gi|33603818|ref|NP_891378.1| hypothetical protein BB4845 [Bordetella bronchiseptica RB50]
 gi|33574874|emb|CAE39537.1| putative membrane protein [Bordetella parapertussis]
 gi|33577943|emb|CAE35208.1| putative membrane protein [Bordetella bronchiseptica RB50]
          Length = 261

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 63/261 (24%), Positives = 128/261 (49%), Gaps = 8/261 (3%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170
              +G  +   I         LG +++ +G               + +Q++++G   + +
Sbjct: 7   LSGLGGWVRGQIGGIGYFTRFLGALLARSGIAVRRP-------GLVSQQVHFIGNYSLLI 59

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           + +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ A
Sbjct: 60  IAVSGLFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTALLFAGRAGTSLTA 119

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           EIG MK  E++ A+  M +D +R ++ PR W  II++P+L  + +   I+G  IV     
Sbjct: 120 EIGLMKAGEQLSAMEVMAVDPMRRVLVPRFWGGIIAMPVLAAVFSMVGILGGWIVGVLMI 179

Query: 291 DIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            +    F+S+  +    L ++  G+IK+      + +VA+ EG+        +G+  T  
Sbjct: 180 GVDAGAFWSQMQNGVDVLDDVLNGVIKSLVFGVTVTLVALYEGWQARPTPEGVGRATTRT 239

Query: 350 VVQSISIVIIIDSLFAIFYFA 370
           VV     V+ +D +     F 
Sbjct: 240 VVVGSLAVLGLDFILTALMFG 260


>gi|224827292|ref|ZP_03700385.1| protein of unknown function DUF140 [Lutiella nitroferrum 2002]
 gi|224600505|gb|EEG06695.1| protein of unknown function DUF140 [Lutiella nitroferrum 2002]
          Length = 261

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 74/267 (27%), Positives = 136/267 (50%), Gaps = 8/267 (2%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
           + +      H+G   +  I      +  L  ++  +G+           L   IR++Y+ 
Sbjct: 2   FETLTAPLRHLGHVTINAIWRLGFASRFLLAILLQSGQSFRR-------LNLTIREVYFA 54

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           GV  + ++++     G V+  QG   LS+FG+      L+++  LRE+G +L A++ A R
Sbjct: 55  GVLSLIIIVVSGLFVGMVLGLQGYNTLSRFGSADALGALVALSLLRELGPVLAALLFASR 114

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           SGSA+ AEIG MK  E++DA+  M ++ +  +++PR WA +IS+P+L  L N + I G  
Sbjct: 115 SGSAMTAEIGLMKATEQLDAMSVMAVNPIARVVAPRFWAGVISMPVLAALFNVTGIFGGY 174

Query: 284 IVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
            V  +   +    F+S+  ++  L  ++  GLIK+ F   A+ ++A+ EG+     +  +
Sbjct: 175 FVGVQLIGLDEGTFWSQMQNSVDLHNDVINGLIKSLFFGIAVTLIAVFEGYDATPTAAGV 234

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYF 369
               T  VV S  +++ +D +   F F
Sbjct: 235 SSATTRTVVTSALVILALDFVLTAFMF 261


>gi|330432403|gb|AEC17462.1| conserved hypothetical protein [Gallibacterium anatis UMN179]
          Length = 261

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 70/254 (27%), Positives = 126/254 (49%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I +           LG              +F+     +++Q+Y +GV  + +++L    
Sbjct: 6   IERLGKRGVHWLCTLGKSALMLYGALVGVPQFRKNFPLVVKQLYVLGVQSLLIIVLSGLF 65

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 66  IGMVLGLQGYVILVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++  +  M ++ +R +I+PR WA +I++PLL ++     I G S+V   +  +    F
Sbjct: 126 TEQLSGLEMMAVNPLRRVIAPRFWAGMIAMPLLALIFTAVGIWGGSLVGVDWKGVDGGSF 185

Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   S+     +I  G+IK+   A ++  +A+  G+     S  + +  T  VVQ+  +
Sbjct: 186 WSVMQSSVVWGKDIGNGIIKSLCFALSVVWIALFNGYNALPTSEGISQATTKTVVQASLV 245

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 246 VLALDFILTALMFG 259


>gi|75907908|ref|YP_322204.1| hypothetical protein Ava_1687 [Anabaena variabilis ATCC 29413]
 gi|75701633|gb|ABA21309.1| Protein of unknown function DUF140 [Anabaena variabilis ATCC 29413]
          Length = 263

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 69/239 (28%), Positives = 116/239 (48%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           L   I   G+      + K    +   QM  VG   + + +L +   GAV   Q A +  
Sbjct: 15  LLAAIFLGGQAIVHLLRGKIHWRNTREQMAAVGPDSLFIALLTAVFVGAVFTIQVAREFI 74

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            FGA      ++++   RE+  +LTAV++AGR GSA  AEIG+M++ E+IDA+  +  D 
Sbjct: 75  NFGAGNLVGGVLAVALTRELSPVLTAVILAGRVGSAFAAEIGTMRVTEQIDAMLMLKTDP 134

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           +  L+ PR+ A  + LP+LT+L+  + I+G  I+    Y I   VF     +   + +I 
Sbjct: 135 IDYLVIPRLLACFLMLPILTLLSLVTGILGGLIIATNMYGISDTVFLDSARNLLEVWDIC 194

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           + +IKA      I I+    G      +  +G+  TT VV ++ I+ + +   +   F 
Sbjct: 195 SAMIKACCFGVLIAIIGCSWGLTTTGGAKGVGQSTTTAVVTALLIIFVSNFFLSWVMFQ 253


>gi|284929638|ref|YP_003422160.1| hypothetical protein UCYN_11070 [cyanobacterium UCYN-A]
 gi|284810082|gb|ADB95779.1| conserved hypothetical integral membrane protein [cyanobacterium
           UCYN-A]
          Length = 263

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 68/239 (28%), Positives = 114/239 (47%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           L   I   G+      K K    + + QM  VG   + + ++ +   G V   Q A +  
Sbjct: 18  LVAAILLGGQVFFHILKTKIHKRNTLEQMSVVGPESLTISMITAAFVGMVFTIQVAREFI 77

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            FGA      ++++   RE+  +LTAV++AGR GSA  AEIG+M++ E++DA+  +  D 
Sbjct: 78  SFGAVSTVGGVLALALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQVDALYMLKTDP 137

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           +  L+ PR+ A  + LP+L IL+  + + G  ++    YDI   VF +   +     ++ 
Sbjct: 138 ISYLVVPRVLACCLMLPILNILSLITGMAGGLLIANGLYDISVYVFLTSVRNFLEFWDLI 197

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           T  IKA      I ++    G      +  +G+  TT VV S+  V II+   +   F 
Sbjct: 198 TSTIKAITFGGLIAVIGCSWGLTTSGGAKGVGQSTTTAVVTSLLAVFIINFFLSWIMFQ 256


>gi|301155764|emb|CBW15232.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Haemophilus parainfluenzae T3T1]
          Length = 261

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 75/267 (28%), Positives = 135/267 (50%), Gaps = 8/267 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             ++   +G+ ++KF         +L       G       + +     L++Q+Y +GV 
Sbjct: 2   IVDMISSLGRSVIKFFRALGRSGFML------FGALVGKP-QIRKHFPLLVKQLYALGVQ 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + +++L     G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GS
Sbjct: 55  SLLIILLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGS 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++ ++  M +D +R +I+PR WA +I++P+L IL     I G S+V 
Sbjct: 115 ALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPILAILFTAIGIWGGSLVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
             +  +    F+S   +  + + +I  G IK+ F A A+  +A+  G+     S  + + 
Sbjct: 175 VDWKGVDAGSFWSVMQNAVSWSYDILNGFIKSVFFAIAVVWIALFNGYDCIPTSEGISQA 234

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAIG 372
            T  VV +  +V+ +D +     F  G
Sbjct: 235 TTRTVVHASLVVLGLDFILTAIMFGAG 261


>gi|295691537|ref|YP_003595230.1| hypothetical protein Cseg_4204 [Caulobacter segnis ATCC 21756]
 gi|295433440|gb|ADG12612.1| protein of unknown function DUF140 [Caulobacter segnis ATCC 21756]
          Length = 269

 Score =  227 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 73/254 (28%), Positives = 122/254 (48%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      + +   ++G V        A++     F   L+RQ   +G   +PVV L +  
Sbjct: 15  IQALGRSTLAAVRMVGAVGVFAARGTAAALSPPWFPGQLLRQFMAIGFFSLPVVGLTAVF 74

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TGA +A        +F AE     ++++   RE+G +L A+M+AGR  +AI AEIG+M+ 
Sbjct: 75  TGAALALNIFTGGGRFNAEQVMPQIVALGITRELGPVLAALMLAGRVSAAIAAEIGAMRA 134

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+RT+  D  R L+ PR+ A ++ LPLLT +A+   + G  +V  +  D    V+
Sbjct: 135 TEQIDAMRTLSTDPFRYLVGPRLLAGVLMLPLLTAVADTIGVAGGWLVATRVLDFSPTVY 194

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                      +I +GLIKA      + ++    G+     +  +G+  T  VV S  ++
Sbjct: 195 IRNTIDFLESWDIVSGLIKAAVFGFIVALMGCYHGYNASGGARGVGRATTHAVVSSAILI 254

Query: 358 IIIDSLFAIFYFAI 371
              D L   F+  +
Sbjct: 255 FASDYLLTTFFTHM 268


>gi|145588286|ref|YP_001154883.1| hypothetical protein Pnuc_0097 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145046692|gb|ABP33319.1| protein of unknown function DUF140 [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 265

 Score =  227 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 68/265 (25%), Positives = 128/265 (48%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             +L   +G  I + +      A +   VI  +G               +I Q+ +VG  
Sbjct: 7   ILDLFGDLGFFIRRNLTSLGLAARMFTAVIWRSGFLLKRP-------RLVIDQILFVGNH 59

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
              ++ +     G V+  QG + L+++G+E     L+++   RE+G ++TA++ AGR+G+
Sbjct: 60  SFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLTRELGPVITALLFAGRAGT 119

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           ++ AEIG MK  E++ A+  M +D +  +I+PR+WA IIS+P+L  +     ++G  +V 
Sbjct: 120 SLTAEIGLMKAGEQLSAMEMMAVDPLGRVIAPRLWAGIISMPILATIFTAVGVLGGYLVG 179

Query: 287 WKYYDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                +    F+S+        ++I  GLIK+     A+  +A+ +G+        + + 
Sbjct: 180 VPLIGVDSGAFWSQMQGGVDLFSDIGNGLIKSLVFGVAVTFIALYQGYEAKPTPEGVSQA 239

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV S   V+ +D L     F+
Sbjct: 240 TTRTVVISSLSVLALDFLLTAMMFS 264


>gi|219870961|ref|YP_002475336.1| resistance to organic solvents ABC transporter permease
           [Haemophilus parasuis SH0165]
 gi|219691165|gb|ACL32388.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Haemophilus parasuis
           SH0165]
          Length = 257

 Score =  227 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 73/262 (27%), Positives = 132/262 (50%), Gaps = 7/262 (2%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
                IG  +++ I        +L   + +         +F+      I+Q++ +GV  +
Sbjct: 2   EFISSIGASVIQAIRAMGRATFMLWGALVD-------KPEFRKHTPLFIKQLHVLGVQSL 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            +++L     G V+  QG   L  F AE     L+S+  LRE+G ++TA++ AGR+GSA+
Sbjct: 55  LIIMLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVSLSLLRELGPVVTALLFAGRAGSAL 114

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG MK  E++ ++  M +D +R +I+PR WA II++P+L ++     I G S+V   
Sbjct: 115 TAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGIIAMPILAVIFTAIGIWGGSLVGVD 174

Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
           +  +    F+S   ST T+ ++  G IK+   A A+  +A+  G+     S  + +  T 
Sbjct: 175 WKGVDVGSFWSVMQSTVTMGDLLNGFIKSIVFAFAVVWIALFNGYDALPTSEGISQATTR 234

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +  +++ +D +     F 
Sbjct: 235 TVVHASLVILGLDFILTAIMFG 256


>gi|156935718|ref|YP_001439634.1| hypothetical protein ESA_03587 [Cronobacter sakazakii ATCC BAA-894]
 gi|156533972|gb|ABU78798.1| hypothetical protein ESA_03587 [Cronobacter sakazakii ATCC BAA-894]
          Length = 260

 Score =  227 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 76/265 (28%), Positives = 129/265 (48%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             NL   +G++ +KF       +   G              +F+     L+RQ+Y VGV 
Sbjct: 2   LLNLLASMGQRGLKF-------SASFGRAGLMLFNAIVGKPEFRKHGPLLVRQLYNVGVL 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++I+     G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GS
Sbjct: 55  SMIIIIVSGLFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGS 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++ ++  M +D +R +ISPR WA +ISLPLLT++     + G S+V 
Sbjct: 115 ALTAEIGLMKATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGVWGGSLVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
             +  I    F+S          ++   LIK+   A  +  +A+  G+     S  + + 
Sbjct: 175 VNWKGIDAGFFWSAMQDAVDWRMDLINCLIKSVVFAITVTWIALFNGYDAIPTSAGISRA 234

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV +   V+ +D +     F 
Sbjct: 235 TTRTVVHASLAVLGLDFVLTALMFG 259


>gi|310766231|gb|ADP11181.1| ABC transporter, permease subunit, probable toluene tolerance
           protein [Erwinia sp. Ejp617]
          Length = 235

 Score =  227 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 68/233 (29%), Positives = 120/233 (51%), Gaps = 1/233 (0%)

Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198
                    +F+     L++Q+Y +GV  + +V++     G V+  QG   L  +GAE  
Sbjct: 2   LFHALFGIPRFRKHAPLLVKQLYNIGVLSLLIVVVSGLFIGMVLGLQGYLILKTYGAEAS 61

Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258
              ++++  LRE+G +++A++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +ISP
Sbjct: 62  LGMMVALSLLRELGPVVSALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRIISP 121

Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKA 317
           R WA  IS+PLLT++     I+G ++V   +  I    F+S   +   L  +I    IK+
Sbjct: 122 RFWAGFISMPLLTLIFVAVGILGGALVGVSWKGIDSGFFWSAMQNAVDLQTDIINCTIKS 181

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
              A  +  +A+  G+     S  + +  T  VV +   V+ +D +     F 
Sbjct: 182 AVFAVTVTWIALFNGYDAIPTSEGISRATTRTVVHASLAVLGLDFVLTALMFG 234


>gi|226939556|ref|YP_002794629.1| ABC transport system permease protein [Laribacter hongkongensis
           HLHK9]
 gi|226714482|gb|ACO73620.1| putative ABC transport system permease protein [Laribacter
           hongkongensis HLHK9]
          Length = 371

 Score =  227 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 93/363 (25%), Positives = 169/363 (46%), Gaps = 16/363 (4%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK---Y 65
            R  G   +  +  I  + + A+    Q+    +D SA+T++D+ G  L+   +      
Sbjct: 16  LRLEGPLTTHSVGSIWAEALAALAAQPQT-PLTLDASAVTQLDSAGLVLLHRLLHDPRPA 74

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
              + L G++   + L   I                       +    IG   +  ++  
Sbjct: 75  SAPVALSGLAAEYQPLLERIRTASLT---------PPASPPPLSPVERIGAATLSGLHTG 125

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                  G   S          + +G    ++  M   G   +P+V+LI F+ G ++A Q
Sbjct: 126 RDSVVWTGASASALWRALCRPARLEG--ARVLDIMASAGTQALPIVLLIGFLMGTILAFQ 183

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
                  FGA +  ++ + I  LRE+G L+TA++ AGRSG+A  AE+G+ K+NEEI A+ 
Sbjct: 184 MGLVAQGFGAGLLVVNGIGIAMLRELGPLMTAIVFAGRSGAAFAAELGTQKVNEEIYALH 243

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           T G+D V  L+ PR+ A ++ LPLLT+LA+   ++G ++V+  +  +    F+ +  +T 
Sbjct: 244 TFGIDPVAFLVLPRLVAAVLVLPLLTVLADVIGLLGGALVMQAF-SVTPMQFYHQTLATV 302

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           +L +++ GL K+      I  +  ++G + G    ++G   T  VV S+  +++ID LFA
Sbjct: 303 SLTDLYFGLGKSMVFGLFIAQIGCRQGLSAGQGPTAVGVAATRAVVSSLIWIVVIDGLFA 362

Query: 366 IFY 368
              
Sbjct: 363 ALL 365


>gi|293391911|ref|ZP_06636245.1| conserved ABC-type transport system protein, permease component
           [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290952445|gb|EFE02564.1| conserved ABC-type transport system protein, permease component
           [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 261

 Score =  227 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 76/265 (28%), Positives = 132/265 (49%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             NL   +G+  + F         +L       G       +       LI+Q++ +GV 
Sbjct: 2   LTNLISALGRNAINFARAMGRAGFLL------FGALIGKP-QINKHFPLLIKQLHVLGVQ 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + +++L     G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GS
Sbjct: 55  SLLIIMLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGS 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++ ++  M +D +R +I+ R WA +I++P+L+I+     I G S+V 
Sbjct: 115 ALTAEIGLMKATEQLSSLEMMAVDPLRRVIASRFWAGVIAMPILSIIFIAIGIWGGSLVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
             +  +    F+S   S+ T + +I  G IK+ F A A+  +A+  G+     S  + K 
Sbjct: 175 VDWKGVDSGSFWSVMQSSVTWSHDILNGFIKSLFFAIAVVWIALFNGYDCIPTSEGISKA 234

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV +  +V+ +D +     F 
Sbjct: 235 TTRTVVHASLVVLGLDFVLTTIMFG 259


>gi|327399719|ref|YP_004340588.1| hypothetical protein Hipma_1573 [Hippea maritima DSM 10411]
 gi|327182348|gb|AEA34529.1| protein of unknown function DUF140 [Hippea maritima DSM 10411]
          Length = 254

 Score =  227 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 68/261 (26%), Positives = 111/261 (42%), Gaps = 8/261 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
            +   IG+  + F  D      +    I    E        K        QMY++GV   
Sbjct: 2   GIIAAIGRFTINFTRDMGGVFLLFISTIKALFE--------KPRFHLTAEQMYFIGVKST 53

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            +V L S   G V   Q      +FGAE      +++   RE+  +LTA+MI  R+ SA+
Sbjct: 54  LIVALTSMFVGMVEVLQIYHGFHKFGAESMIGYTVAVSLGRELSPVLTALMIVARNVSAM 113

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AE+G+M++ ++IDA+  M ++ +  L++PR+ A  + LP L  L+N    IG  +V   
Sbjct: 114 AAELGTMRVTQQIDALEVMAVNPINFLVAPRVIATTVMLPALVSLSNAIGNIGGYLVGIG 173

Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
              +    +         + ++  GLIKA      I ++    G      S  +G   T 
Sbjct: 174 VLGLNPTSYTKNIQVYIDMTDLTYGLIKAAVFGLIISLIGCYMGLTTKGGSRGVGISTTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYF 369
            VV +   V++ D     F F
Sbjct: 234 AVVAASISVLVADYFLTAFLF 254


>gi|323143323|ref|ZP_08078012.1| toluene tolerance protein Ttg2B [Succinatimonas hippei YIT 12066]
 gi|322416895|gb|EFY07540.1| toluene tolerance protein Ttg2B [Succinatimonas hippei YIT 12066]
          Length = 257

 Score =  227 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 73/253 (28%), Positives = 124/253 (49%), Gaps = 1/253 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +  +   LG               FK     LI Q+Y+VGV  V ++++    
Sbjct: 5   ISSLGRYAIRKVTSLGRSTIMLYHALVGKPDFKKHFPLLISQIYFVGVQSVIIILVSGLF 64

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L  F A      L+++  +RE+G ++TA++ AGR+GSA+ AEIG +K 
Sbjct: 65  IGMVLGLQGFNILKDFMATGSLGTLVALAIIRELGPVVTALLYAGRAGSALTAEIGQLKA 124

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
           +E++ ++  M +D +R +ISPR WA  IS+PLL+I+     I G  +V   +  +   ++
Sbjct: 125 SEQLSSMEMMAVDPLRRIISPRFWAGAISMPLLSIMFCLVGIYGGKLVGVDWLGLDDGIY 184

Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   S+  L  +I   ++K+   A     +A+  G+     S+ +    T  VVQS   
Sbjct: 185 WSGMQSSVDLVEDIGCMVVKSIVFAIVCTWIALFNGYDCTPTSSGISNATTATVVQSSLA 244

Query: 357 VIIIDSLFAIFYF 369
           V+ +D +     F
Sbjct: 245 VLGLDFVLTALMF 257


>gi|120555619|ref|YP_959970.1| hypothetical protein Maqu_2708 [Marinobacter aquaeolei VT8]
 gi|120325468|gb|ABM19783.1| protein of unknown function DUF140 [Marinobacter aquaeolei VT8]
          Length = 260

 Score =  227 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 64/255 (25%), Positives = 123/255 (48%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           +I        +     G          A   +       L++Q+Y VGV  + +V++   
Sbjct: 4   RIAGLGRLGIAIIASFGRSGQFLFGVLAGVPRPATGFPLLVKQLYAVGVLSLAIVVVSGL 63

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   LS +G+E     ++++  +RE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 64  FIGMVLGLQGYTILSDYGSESAIGQMIALTLVRELGPVVTALLFAGRAGSALTAEIGLMK 123

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  MG+D +R +++PR+WA  +++P+L ++ +   I G  +V  ++  +    
Sbjct: 124 ATEQLSSMEMMGVDPLRRVVAPRLWAGFLAMPVLAMIFSVVGIWGGMLVGVEWLGVFEGS 183

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+    S+     ++  G IK+         +A+ +G+     S  +    T  VV S  
Sbjct: 184 FWGNMQSSVDFVDDVLNGFIKSVVFGFVCAWIAVYQGYDCVPTSAGISSATTKTVVYSSL 243

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 244 AVLGLDFVLTAVMFG 258


>gi|114328883|ref|YP_746040.1| ABC transporter permease [Granulibacter bethesdensis CGDNIH1]
 gi|114317057|gb|ABI63117.1| ABC transporter permease protein [Granulibacter bethesdensis
           CGDNIH1]
          Length = 259

 Score =  227 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 125/264 (47%), Gaps = 7/264 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             +    +G+        +          ++         +  + FL +L+     +G  
Sbjct: 2   ILSPLAWLGRGFFSACASTGRMGVFG---LTALSHLLRPPFYGRMFLRALVE----IGYF 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PVV L +  TG V+A Q     ++F AE     L+S+   RE+G +L  +M+AGR G+
Sbjct: 55  SLPVVALTAIFTGMVLALQSYTGFARFSAESAIASLVSLSVTRELGPVLAGLMVAGRVGA 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AE+G+M++ ++IDA+ T+    ++ L++PR+ A  I+LPLL I+A+   ++G  +V 
Sbjct: 115 AMAAELGTMRVTDQIDALTTLSTHPMKYLVAPRLLAGTIALPLLVIIADILGVMGGWLVA 174

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
                     + +   ++  + ++ +GL KA      I +     G+     +  +G   
Sbjct: 175 SIKLGFNSHTYLANTIASIHMDDVMSGLTKAAVFGFLIALQGCYHGYNSRGGAQGVGSAT 234

Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370
           T+ VV +  +++  D +    +F+
Sbjct: 235 TSAVVTASVLILAFDYVLTELFFS 258


>gi|254253460|ref|ZP_04946778.1| ABC-type organic solvent resistance transport system permease
           protein [Burkholderia dolosa AUO158]
 gi|124896069|gb|EAY69949.1| ABC-type organic solvent resistance transport system permease
           protein [Burkholderia dolosa AUO158]
          Length = 255

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 59/262 (22%), Positives = 130/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +     +   ++                   + +Q++++G     
Sbjct: 1   MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D ++ +I+PR+WA II++PLL  + N   ++G   V    
Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKNVIAPRMWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+  S   +  ++  G++K+     A+  +A+ +G+        + +  T 
Sbjct: 174 IGVDPGAFWSQMQSGVQVWADVGNGVLKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255


>gi|296104907|ref|YP_003615053.1| putative ABC transport system permease protein [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295059366|gb|ADF64104.1| putative ABC transport system permease protein [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 260

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 75/255 (29%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++I+   
Sbjct: 5   ALAALGHRGIKTIRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGL 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLTIL     I G S+V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTILFVAVGIWGGSLVGVHWKGIDAGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S       L  ++   LIK+   A  +  +A+  G+     S  + +  T  VV S  
Sbjct: 185 FWSAMQDAIDLRMDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|114776717|ref|ZP_01451760.1| hypothetical protein SPV1_10896 [Mariprofundus ferrooxydans PV-1]
 gi|114552803|gb|EAU55234.1| hypothetical protein SPV1_10896 [Mariprofundus ferrooxydans PV-1]
          Length = 266

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 73/265 (27%), Positives = 133/265 (50%), Gaps = 7/265 (2%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
           ++       +G+  ++ I      A +LG  +     F    ++ K F+L    Q+  +G
Sbjct: 9   SATATFFGRLGRHALRGIEQIGD-ATMLG--LGALSLFFVRPWQGKHFVL----QLSALG 61

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
           V  + ++I+    TG V+A QG + L++FG+E      + +  +RE+G +L A M+ GR+
Sbjct: 62  VGSLIIIIITGAFTGMVLALQGYYTLAKFGSESLLGAGVGMSIIRELGPVLGAFMVIGRA 121

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           GS+I AEIG M++ E+ DA+  M ++  + ++ PRI A  I++PLL  + +   I    I
Sbjct: 122 GSSITAEIGIMRVTEQTDALEMMAINPKQRILLPRIVATTIAVPLLVSIFDVIGIGSGYI 181

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
           V  +   +    + +   ST T+ +I+ G +KA      IG++    G+     +  + +
Sbjct: 182 VGVELLGVNPGAYMAELVSTVTMHDIYGGWVKAVVFGFMIGMICTYMGYRSEPTTEGVAR 241

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYF 369
             T  VV S   V+I+D +   FY 
Sbjct: 242 ATTQAVVVSSVTVLILDYILTSFYL 266


>gi|301060804|ref|ZP_07201619.1| conserved hypothetical protein [delta proteobacterium NaphS2]
 gi|300445201|gb|EFK09151.1| conserved hypothetical protein [delta proteobacterium NaphS2]
          Length = 258

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 65/257 (25%), Positives = 125/257 (48%), Gaps = 4/257 (1%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            + K    + S    +G +          ++     +   ++Q+ ++G   + +++L   
Sbjct: 2   AVRKLGFSTLSYVRKMGAMGLFFLNTLFYTFVPPVKIYRCLKQIRFIGFQSLLLILLTGA 61

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
            +G ++  QG + LS+FG++ F   ++ +  ++E+G ++ A+M+ GR+GSAI AEIG M+
Sbjct: 62  FSGMILGFQGFYSLSRFGSDAFLGPMVGLALIKELGPVIAALMVTGRAGSAITAEIGIMR 121

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           I+E+IDA+  MGL+  R L+ P + A +I LPLLT + +   I G  ++  +   +    
Sbjct: 122 ISEQIDALELMGLNPYRYLVVPNLLAAVICLPLLTAIFDVVGIFGGYLIGGELLGVGAGT 181

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF----AVGVHSNSLGKKVTTCVVQ 352
           +F        + ++  G+ K+      I  V   +GF      G  S  + K  T  VV 
Sbjct: 182 YFGEMAHYVEMKDVLEGIYKSFSFGVIIAWVCCFKGFYSGIYTGFGSEGVSKATTQAVVL 241

Query: 353 SISIVIIIDSLFAIFYF 369
           S  ++++ D       F
Sbjct: 242 SSVLILVWDYFMTSILF 258


>gi|162456584|ref|YP_001618951.1| putative ABC transport system permease protein [Sorangium
           cellulosum 'So ce 56']
 gi|161167166|emb|CAN98471.1| putative ABC transport system permease protein [Sorangium
           cellulosum 'So ce 56']
          Length = 266

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 66/252 (26%), Positives = 121/252 (48%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           + +    +    +G +++ T +      +        +  M ++G   V +V L    +G
Sbjct: 15  RALEPVLAFLDNIGNIVTLTFQTIVWLVRPPFRPAQFLAAMDFMGAQSVFIVGLTGVFSG 74

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+  Q ++ L  F AE     L+++   RE+  + +A+M+  R+GSA+ AE+G+M++ E
Sbjct: 75  MVVTLQTSYALRAFSAEGRVGGLVAVSLARELAPVFSAIMVTARAGSAMAAELGNMRVTE 134

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +IDAI TMG+  V+ L+SPR++A  + LPLL IL     + G+ +V   +       FF 
Sbjct: 135 QIDAIATMGVSPVQYLLSPRLFAATVMLPLLCILYTSVGMCGSYLVAVLWLGGDEGAFFQ 194

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                A   +I  GLIKA      +  ++ + GF     +  +G   T  VV+S   V++
Sbjct: 195 SIRDFALPKDISMGLIKACVFGFIVSSISCRHGFYASGGARGVGVATTRAVVESCVTVLV 254

Query: 360 IDSLFAIFYFAI 371
            + +       +
Sbjct: 255 TNYILTQLLLDM 266


>gi|78222485|ref|YP_384232.1| hypothetical protein Gmet_1271 [Geobacter metallireducens GS-15]
 gi|78193740|gb|ABB31507.1| protein of unknown function DUF140 [Geobacter metallireducens
           GS-15]
          Length = 255

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 72/262 (27%), Positives = 137/262 (52%), Gaps = 9/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   +GK+++ F         I+G ++    +      +    +LS+  QM  +G   +P
Sbjct: 1   MFERVGKRVIAF-------NEIVGEMVMLLCQTVWFFREAPRNILSIFTQMSIIGYETLP 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +  +++F  G V+A Q   +L ++G +     ++ +  +RE+G ++T+ ++AGR+GSA+ 
Sbjct: 54  MASVMAFFVGMVLALQTGAELQKYGTQNIIGGIVGLSMVRELGPVMTSFLVAGRAGSAMA 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK+ EEIDA++T+ ++ VR L  PR+ A +I +P L I A+F  I+G +++   +
Sbjct: 114 AEIGVMKVYEEIDALKTLDINPVRYLAMPRLIACLICVPALVIYADFVGILGGALLSHLH 173

Query: 290 --YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
               I ++ ++   ++   L  I  GL+KA    C IG+V+   GF     +  + +  T
Sbjct: 174 PKIFISYSTYYDSLNTALKLKEIGAGLLKATVFGCIIGVVSCYTGFKTTGGARGIAQSTT 233

Query: 348 TCVVQSISIVIIIDSLFAIFYF 369
             VV S  +++  D        
Sbjct: 234 RAVVLSFMLILAADYFLTRLLL 255


>gi|320353203|ref|YP_004194542.1| hypothetical protein Despr_1079 [Desulfobulbus propionicus DSM
           2032]
 gi|320121705|gb|ADW17251.1| protein of unknown function DUF140 [Desulfobulbus propionicus DSM
           2032]
          Length = 371

 Score =  227 bits (579), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 97/374 (25%), Positives = 173/374 (46%), Gaps = 21/374 (5%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S+         G W          ++V A++ SI+  +     + + E DT    L+++ 
Sbjct: 12  SQPSRLTVHLQGAWTLRTDPPPPTELVGALDSSIR--TLAFLSTDLAEWDT---RLLVFL 66

Query: 62  MEKYHGK------IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIG 115
                        + L+G+   + +L +L      K         ++  N  + L   IG
Sbjct: 67  KATTAAARNGGIAVDLEGLPPGVRRLLALSEAVPEKV--------TYGKNVRELLVTRIG 118

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +  +     +   A   G +I       A    FK         +   GV  +P+V LI+
Sbjct: 119 RLTLALSGQAREAAAFTGEIILACMALAAGKKPFK--WRDFFYFIQSCGVESLPIVSLIA 176

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
            + G +++  GA QL  FGA+I+  +L+ +  + E+G L++ V+IAGR G+A  A++G+M
Sbjct: 177 VLVGVILSFVGAVQLQMFGAQIYVANLVGLGMVLEMGALMSGVIIAGRIGAAYAAQLGTM 236

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           ++NEEIDA+RTMG+  V  L+ PR+ AL++ LPLL + A+   I+G S++     D+   
Sbjct: 237 QVNEEIDALRTMGISPVGFLVLPRMLALMLMLPLLCVYADIMGILGGSVIGVTMLDLSLI 296

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            +  +   T  L     G++KA      IG      G   G  + ++G+  T+ VV SI 
Sbjct: 297 EYLEQTRKTLRLGQCGQGILKASIFGVLIGYAGCLRGMQCGRSALAVGEATTSAVVTSIV 356

Query: 356 IVIIIDSLFAIFYF 369
           ++++ DS+     +
Sbjct: 357 LIVVSDSIITFLLY 370


>gi|220904331|ref|YP_002479643.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219868630|gb|ACL48965.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 375

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 82/372 (22%), Positives = 158/372 (42%), Gaps = 13/372 (3%)

Query: 6   ITVFRFA--GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
             + R +  G+W             +            ++   +   D+     ++  ++
Sbjct: 13  GPLLRVSVGGSWNIDRAWPPEARTALESLTDQSIREVRLESDNLGVWDSSLLVFLVQLVQ 72

Query: 64  KYHGKIKL--QGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
             + +       +   +E+L  L      K   ++K +         N    +G+  +  
Sbjct: 73  TANERKANLHTSLPDGLERLLKLAFAVPAKAGSDRKKEE-------LNFVQRVGQVAIDL 125

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                   + +G V    G       + +     L+  M   GV  +P++ + S + G +
Sbjct: 126 PPRVTDFLNFVGDVTLAVGRLFVGRTQMRP--QDLLAAMQECGVQALPIISITSMLFGLI 183

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A  GA QL+QFGA+I+   L+ I  LR +G ++  V++AGR G+A  A IG+M++NEE+
Sbjct: 184 LAFVGAVQLTQFGAQIYVAGLVGIGMLRVMGAVMVGVVMAGRVGAAYAALIGTMQVNEEV 243

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+ T+G+  V  L+ PR+ AL   +PLLT+ A+   ++G  IV     +I    + +  
Sbjct: 244 DALATLGIAPVDFLVLPRVVALTAMIPLLTLYADLMGVVGGYIVATTMLNINPMEYINAT 303

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                  ++F GL         I +    +G   G  + ++G   TT VV +I  +I+  
Sbjct: 304 MQMVPYKHVFIGLAYGTVFGVIIAMTGCYQGMRCGRSAQAVGLATTTAVVHAIVGIIVAT 363

Query: 362 SLFAIFYFAIGI 373
           ++  +    + I
Sbjct: 364 AVITVICNVLDI 375


>gi|254489694|ref|ZP_05102890.1| conserved hypothetical protein [Methylophaga thiooxidans DMS010]
 gi|224465103|gb|EEF81356.1| conserved hypothetical protein [Methylophaga thiooxydans DMS010]
          Length = 260

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 69/265 (26%), Positives = 125/265 (47%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             NL   +G+  +            L  ++                   +++Q++ VGV 
Sbjct: 1   MINLIRSLGRWGLGTFERQGRAHLFLFNMLLGIPGLFLR-------FSLVVQQLFSVGVL 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++++     G V+  QG   L  FGAE     L+S+  +RE+G +++A++ AGR+GS
Sbjct: 54  SILIILISGLFVGMVLGLQGYNTLVDFGAEESLGVLVSLSLVRELGPVVSALLFAGRAGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++  +  M +D +R +I+PR  A II++PLL  + +   I+G  +V 
Sbjct: 114 ALTAEIGLMKSTEQLSGMEMMAVDPIRRIIAPRFLAGIIAMPLLAAIFSAVGILGGFLVG 173

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                +    F+S+  +   L  +I  G+IK+      +  +A+ EG      S  +G+ 
Sbjct: 174 HGLLGVDDGAFWSQMQAKTDLYDDILNGVIKSVVFGFVVTWIALFEGHDATPTSEGVGRA 233

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV S   ++ +D +     F 
Sbjct: 234 TTRTVVHSAFAILGLDFVLTALMFG 258


>gi|330888613|gb|EGH21274.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. mori str.
           301020]
          Length = 230

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 63/219 (28%), Positives = 126/219 (57%), Gaps = 1/219 (0%)

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
              L+RQ+Y VGV  + ++++     G V+A QG   L+++G+E     ++++  LRE+G
Sbjct: 10  FQLLVRQLYSVGVMSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELG 69

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            ++TA++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  IS+P+L +
Sbjct: 70  PVVTALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAM 129

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKE 331
           + +   + GAS V   +  +    F+S   ++ +   ++  G+IK+   A  +  +A+ +
Sbjct: 130 IFSVVGVWGASWVAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQ 189

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G+     S  + +  T  VV +   V+ +D +     F 
Sbjct: 190 GYDCDPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 228


>gi|312795842|ref|YP_004028764.1| Toluene transport system permease [Burkholderia rhizoxinica HKI
           454]
 gi|312167617|emb|CBW74620.1| Toluene transport system permease [Burkholderia rhizoxinica HKI
           454]
          Length = 255

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 63/262 (24%), Positives = 134/262 (51%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   +G+ ++  ++ +   A +   + S                 ++I+Q++++G   + 
Sbjct: 1   MIATVGRAVLDGLSRTGYGARMFARLASECFPLLRRP-------RTVIQQIHFLGNYSLV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG   L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYNTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D +R++++PR WA +I++P+L  + +   I+G  +V    
Sbjct: 114 AEIGLMKAGEQLTAMEMMAVDPIRVVVAPRFWAGVIAMPILAAIFSAVGIVGGYVVGVVL 173

Query: 290 YDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+  S   L  +I  G+IK+     A+  VA+ +G+        + +  T 
Sbjct: 174 IGVDPGAFWSQMQSGVDLRQDIGNGVIKSIVFGFAVTFVALFQGYEAKPTPEGVSRATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F 
Sbjct: 234 TVVFASLAVLGLDFLLTALMFN 255


>gi|167854684|ref|ZP_02477464.1| hypothetical protein HPS_01292 [Haemophilus parasuis 29755]
 gi|167854221|gb|EDS25455.1| hypothetical protein HPS_01292 [Haemophilus parasuis 29755]
          Length = 258

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 71/253 (28%), Positives = 125/253 (49%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I             +G              +F+      I+Q++ +GV  + +++L    
Sbjct: 5   ISSIGASVIQAIRAMGRATFMLWGALVGKPEFRKHTPLFIKQLHVLGVQSLLIIMLSGLF 64

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L  F AE     L+S+  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 65  IGMVLGLQGYVVLVDFSAETSLGQLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 124

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +I+PR WA II++P+L ++     I G S+V   +  +    F
Sbjct: 125 TEQLSSLEMMAVDPLRRVIAPRFWAGIIAMPILAVIFTAIGIWGGSLVGVDWKGVDVGSF 184

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
           +S   ST T+ ++  G IK+   A A+  +A+  G+     S  + +  T  VV +  ++
Sbjct: 185 WSVMQSTVTMGDLLNGFIKSIVFAFAVVWIALFNGYDALPTSEGISQATTRTVVHASLVI 244

Query: 358 IIIDSLFAIFYFA 370
           + +D +     F 
Sbjct: 245 LGLDFILTAIMFG 257


>gi|261342639|ref|ZP_05970497.1| toluene tolerance ABC efflux transporter, permease [Enterobacter
           cancerogenus ATCC 35316]
 gi|288315287|gb|EFC54225.1| toluene tolerance ABC efflux transporter, permease [Enterobacter
           cancerogenus ATCC 35316]
          Length = 260

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 75/255 (29%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++I+   
Sbjct: 5   ALAALGHRGIKTIRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMVIIIVSGL 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLTIL     I G S+V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTILFVAVGIWGGSLVGVHWKGIDAGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S       L  ++   LIK+   A  +  +A+  G+     S  + +  T  VV S  
Sbjct: 185 FWSAMQDAIDLRMDLINCLIKSLVFAVTVTWIALFNGYDAIPTSAGISRATTRTVVHSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|295097681|emb|CBK86771.1| conserved hypothetical integral membrane protein [Enterobacter
           cloacae subsp. cloacae NCTC 9394]
          Length = 260

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 74/255 (29%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++I+   
Sbjct: 5   ALAGLGHRGLKTISTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGL 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLTIL     I G ++V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTILFVAVGIWGGALVGVNWKGIDAGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S       L  ++   LIK+   A  +  +A+  G+     S  + +  T  VV S  
Sbjct: 185 FWSAMQDAIDLRMDLVNCLIKSVVFAVTVTWIALFNGYDAIPTSAGISRATTRTVVHSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|87311113|ref|ZP_01093237.1| probable permease of ABC transporter [Blastopirellula marina DSM
           3645]
 gi|87286204|gb|EAQ78114.1| probable permease of ABC transporter [Blastopirellula marina DSM
           3645]
          Length = 280

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 75/255 (29%), Positives = 122/255 (47%), Gaps = 4/255 (1%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLL----SLIRQMYYVGVSGVPVV 171
           +    +I D  +      + + +   F   + ++    L    +L+   Y VGV  +PVV
Sbjct: 6   EAFFNWIADWGTLGIEFTIAVGDMSLFALRTMQWLFNRLPKRETLVPNFYQVGVMSLPVV 65

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
            L     G V+A Q  FQ  Q G E     ++++  +RE+G +L A M+AGR GSA+ AE
Sbjct: 66  ALTGTFIGMVLAVQSYFQFRQLGLETRLGAVINMTLVRELGPVLAATMLAGRVGSAMAAE 125

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           +G+M++ E+IDA+ +MG + +  L+ PR  A +I +P LT++A+F   +G          
Sbjct: 126 LGTMRVTEQIDALDSMGTNPIHYLVVPRFLACVILIPALTVMADFMGFVGGYFYSVNILG 185

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
           I    +           +IF GLIK+ F    I IV+   GF     +  +G+  T   V
Sbjct: 186 IDQHYYMYNSEQFVQSWDIFYGLIKSVFFGGTIAIVSCHRGFHCEAGAEGVGRAATAAFV 245

Query: 352 QSISIVIIIDSLFAI 366
            S   ++ ID    I
Sbjct: 246 YSFVFILAIDLALGI 260


>gi|152980680|ref|YP_001354988.1| ABC transport system permease protein [Janthinobacterium sp.
           Marseille]
 gi|151280757|gb|ABR89167.1| ABC transport system permease protein [Janthinobacterium sp.
           Marseille]
          Length = 258

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 61/262 (23%), Positives = 131/262 (50%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           L   IG+ + +F+ +          +I  +G               +  Q++++G   + 
Sbjct: 4   LLETIGRLVREFVVNIGFATRTFFGIIGASGGLLRR-------FRLVTSQIHFIGNYSLV 56

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++   RE+G ++TA++ AGR+G+++ 
Sbjct: 57  LIAVSGLFVGFVLGLQGYYTLNKYGSEQALGLLVALSLTRELGPVVTALLFAGRAGTSLT 116

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M ++ ++ +++PR WA +I++P+L  + +   I+G  IV  + 
Sbjct: 117 AEIGLMKAGEQLSAMEMMAVNPLQRVLAPRFWAGVIAMPILAAIFSAVGILGGYIVGVQL 176

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+      +  +I  G+IK+     A+  +A+ +G+        + +  T 
Sbjct: 177 IGVDEGAFWSQMQGGVDVWNDIVNGVIKSIVFGFAVTFIALYQGYEAQPTPEGVARATTR 236

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 237 TVVIASLSVLWLDFLLTALMFS 258


>gi|115350388|ref|YP_772227.1| hypothetical protein Bamb_0333 [Burkholderia ambifaria AMMD]
 gi|172059407|ref|YP_001807059.1| hypothetical protein BamMC406_0342 [Burkholderia ambifaria MC40-6]
 gi|115280376|gb|ABI85893.1| protein of unknown function DUF140 [Burkholderia ambifaria AMMD]
 gi|171991924|gb|ACB62843.1| protein of unknown function DUF140 [Burkholderia ambifaria MC40-6]
          Length = 255

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 59/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +     +   ++                   + +Q++++G     
Sbjct: 1   MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D ++ +I+PR+WA II++PLL  + N   ++G   V    
Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKTVIAPRLWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+      +  ++  G+IK+     A+  +A+ +G+        + +  T 
Sbjct: 174 IGVDPGAFWSQMQGGVQVWADVGNGVIKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255


>gi|83647976|ref|YP_436411.1| organis solvents resistance ABC transporter permease [Hahella
           chejuensis KCTC 2396]
 gi|83636019|gb|ABC31986.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Hahella chejuensis KCTC
           2396]
          Length = 259

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 66/252 (26%), Positives = 128/252 (50%), Gaps = 2/252 (0%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           +   +       LG            + + KGF L L++Q+Y VGV  + ++++     G
Sbjct: 7   RLGRNGLLSLGALGRAGIFLVGSLLGAPRMKGFPL-LLKQLYSVGVLSLVIIVVSGLFIG 65

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+  QG   L  +G+E     ++++  +RE+G ++TA++ AGR+GSA+ AEIG MK  E
Sbjct: 66  MVLGLQGYNILVDYGSEQAIGQMIALTLVRELGPVVTALLFAGRAGSALTAEIGLMKATE 125

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++ ++  MG+D +R +I+PR+ A  I++P+L ++ +   + G  +V  ++  +    F+S
Sbjct: 126 QLSSLEMMGVDPLRQIIAPRLLAGFIAMPMLAMIFSVVGVWGGKMVGVEWLGVYEGSFWS 185

Query: 300 RFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
              ++   + +I  G+IK+         +A+ +G+     S  +    T  VV S   V+
Sbjct: 186 NMQASVDFSDDILNGIIKSIVFGVVCTWIAVFQGYDSVPTSEGISSATTKTVVYSSLAVL 245

Query: 359 IIDSLFAIFYFA 370
            +D +     F 
Sbjct: 246 GLDFILTAVMFG 257


>gi|297621446|ref|YP_003709583.1| putative permease component of ABC transporter [Waddlia
           chondrophila WSU 86-1044]
 gi|297376747|gb|ADI38577.1| putative permease component of ABC transporter [Waddlia
           chondrophila WSU 86-1044]
          Length = 274

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 71/245 (28%), Positives = 124/245 (50%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           +N   +    LG            ++K       +  QMY +GV  +PVV +  F TG V
Sbjct: 13  LNILVNTLAALGDYFRLIALVIWEAFKNPPQAKLIRNQMYEIGVLSLPVVAITGFSTGMV 72

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A Q  FQL+  G    +  +++   + E+G +LTA M+ GR G+++ AE+G+MK+ E+I
Sbjct: 73  LAAQSFFQLADKGLASATGLMVAKAMMVELGPVLTAFMVTGRVGASMCAELGTMKVTEQI 132

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+++M ++ +  LI+PR  A  + LPLLT+ +    I G  ++   +Y +P   F    
Sbjct: 133 DALKSMTVNPLGYLIAPRFIAGTLMLPLLTVFSTVMGIGGGYMIAVWFYKMPSNTFLDPL 192

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
               T  + F+GL+KA      I  ++  +G      +  +G+  T  VV   S+++I +
Sbjct: 193 PINITNFDFFSGLVKAISFGIVIVTISCYKGMTTRGGAAGVGRATTNSVVICYSVILIGN 252

Query: 362 SLFAI 366
            L  +
Sbjct: 253 FLLTV 257


>gi|148261999|ref|YP_001236126.1| hypothetical protein Acry_3017 [Acidiphilium cryptum JF-5]
 gi|146403680|gb|ABQ32207.1| protein of unknown function DUF140 [Acidiphilium cryptum JF-5]
          Length = 362

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 173/367 (47%), Gaps = 19/367 (5%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
             V    G   +  ++E     + A+ ++ Q     +DLS    IDT GA L++     +
Sbjct: 14  GPVIALTGPLTAAALTEAWPRAI-AVARAAQG-VMTLDLSRAARIDTSGAALLLALERGH 71

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
            G+ + QG++   E L + +     +      P R+                    +   
Sbjct: 72  DGETRWQGLTPAAEGLIARLRAALPETGAPPPPPRTVRGPGP--------------LRTL 117

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
             +    G  I  T    A     +G   +  R     G   +P+VI++ F+ G ++A Q
Sbjct: 118 GVRIAFFGETILATTGLPARRRFLRG--GNFFRIAERAGAQALPLVIMLGFLIGMILAFQ 175

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            A  + QFGA+I+   L+S+   RE+G LL AV++AGR+GSA  AE+G+M +NEE+ A+ 
Sbjct: 176 SAIPMRQFGADIYVAALVSLSLFRELGPLLAAVILAGRTGSAFAAELGTMMVNEEVAALT 235

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           TMG+D   +L+ PR+ A ++ +P L +  + S ++G   V+      P +   ++     
Sbjct: 236 TMGIDPGTMLVIPRMAAAMLVMPALALGIDVSGVLGMGFVM-GILGFPPSAIVAQMQMAT 294

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           +  ++  GL+K+     A+G++  + G   G    ++G+  T+ VV  I   I++D LFA
Sbjct: 295 SPHDVLLGLMKSVVFGAAVGLIGCRAGLTAGGGPRAVGEAATSAVVGGIVATILLDGLFA 354

Query: 366 IFYFAIG 372
           +  + +G
Sbjct: 355 VILYRLG 361


>gi|283836259|ref|ZP_06356000.1| toluene tolerance ABC efflux transporter, permease [Citrobacter
           youngae ATCC 29220]
 gi|291067623|gb|EFE05732.1| toluene tolerance ABC efflux transporter, permease [Citrobacter
           youngae ATCC 29220]
          Length = 260

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     LIRQ+Y VGV  + ++I+   
Sbjct: 5   ALASLGHRGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLLIRQLYNVGVLSMLIIIVSGV 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLTI+     I G S+V   +  I    
Sbjct: 125 ATEQLSSLEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   +      ++   LIK+   A  +  +A+  G+     S  + +  T  VV +  
Sbjct: 185 FWSAMQNAVDWRLDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|115379773|ref|ZP_01466845.1| ABC-type transport system involved in resistance to organic
           solvents [Stigmatella aurantiaca DW4/3-1]
 gi|310821468|ref|YP_003953826.1| ABC transporter permease [Stigmatella aurantiaca DW4/3-1]
 gi|115363220|gb|EAU62383.1| ABC-type transport system involved in resistance to organic
           solvents [Stigmatella aurantiaca DW4/3-1]
 gi|309394540|gb|ADO71999.1| ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1]
          Length = 272

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 63/277 (22%), Positives = 129/277 (46%), Gaps = 11/277 (3%)

Query: 91  KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFK 150
           +       +  F   + +N     GK  +  ++D    A++   V+          ++ +
Sbjct: 4   ENADKAPKEPHFLIQAIENF----GKGTIAVVSDVGGVAYLGFQVLR---WAFKRPFRPQ 56

Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210
            F      Q+ +VGV  + +V L    TG V AQQ +   + F AE      +++   RE
Sbjct: 57  IFFS----QLDFVGVGSIFIVALTGLFTGMVFAQQVSTAFALFDAESLVGPTVALTLSRE 112

Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
           +  + +A+M+  R+GS++  E+G+M++ E++DA+ TM ++ V+ L+ PR+ + +I  P+L
Sbjct: 113 LAPVFSALMVTMRAGSSMCTELGTMRVTEQVDALETMAVNPVQYLLVPRVLSGLIMGPVL 172

Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330
           T+L   S + GA ++     +     F SR        +++ G +K       I ++   
Sbjct: 173 TMLFFTSGMSGAYMISVFVQNTSAGTFISRTQQWMEPLDLYEGTLKGAVFGLTITLICCY 232

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           +G+     +  +G+  T  +V S   + I+D +  + 
Sbjct: 233 KGYNASGGAKGVGQATTEAMVSSALAIFILDFIIGVL 269


>gi|171322154|ref|ZP_02911012.1| protein of unknown function DUF140 [Burkholderia ambifaria MEX-5]
 gi|171092530|gb|EDT37852.1| protein of unknown function DUF140 [Burkholderia ambifaria MEX-5]
          Length = 255

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 60/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +     +   ++                   + +Q++++G     
Sbjct: 1   MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D V+ +I+PR+WA II++PLL  + N   ++G   V    
Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPVKTVIAPRLWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+      +  ++  G+IK+     A+  +A+ +G+        + +  T 
Sbjct: 174 IGVDPGAFWSQMQGGVQVWADVGNGVIKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255


>gi|157148765|ref|YP_001456084.1| hypothetical protein CKO_04597 [Citrobacter koseri ATCC BAA-895]
 gi|157085970|gb|ABV15648.1| hypothetical protein CKO_04597 [Citrobacter koseri ATCC BAA-895]
          Length = 260

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++I+   
Sbjct: 5   ALAALGHRGIKTLRTFGRAGLMLFNAVIGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGV 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR+WA +ISLPLLTI+     I G S+V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRLWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S          ++   LIK+   A  +  +A+  G+     S  + +  T  VV S  
Sbjct: 185 FWSAMQDAVDWRLDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|134294506|ref|YP_001118241.1| hypothetical protein Bcep1808_0394 [Burkholderia vietnamiensis G4]
 gi|134137663|gb|ABO53406.1| protein of unknown function DUF140 [Burkholderia vietnamiensis G4]
          Length = 255

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 59/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +     +   ++                   + +Q++++G     
Sbjct: 1   MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D ++ +I+PR+WA II++PLL  + N   ++G   V    
Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPLKTVIAPRLWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+      +  ++  G+IK+     A+  +A+ +G+        + +  T 
Sbjct: 174 IGVDPGAFWSQMQGGVEVWADVGNGVIKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255


>gi|320354123|ref|YP_004195462.1| hypothetical protein Despr_2023 [Desulfobulbus propionicus DSM
           2032]
 gi|320122625|gb|ADW18171.1| protein of unknown function DUF140 [Desulfobulbus propionicus DSM
           2032]
          Length = 272

 Score =  226 bits (577), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 80/266 (30%), Positives = 130/266 (48%), Gaps = 10/266 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           L   IG+   + I        +   +  +        ++F+     LI+Q+ ++G   + 
Sbjct: 11  LLRLIGRMGDQAIYTLTDLGRMGIFLFFSLLGLLKRPFRFR----ELIKQVGFIGAGSLT 66

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V+   +  TG V+  QG + L +FGAE      +S+  + E+G +LTA+M+AGR+GSA+ 
Sbjct: 67  VIFFTALSTGMVLGLQGYYSLHKFGAEGMLGSAVSLSLIMELGPVLTALMVAGRAGSAMC 126

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG M+I+E+IDA+  M +D  R  ISP++ A +IS+PLLT   +   I G  +   K 
Sbjct: 127 AEIGIMRISEQIDALECMAIDPFRYFISPKLLATLISVPLLTAFFDVIGITGGYLAGVKL 186

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV------GVHSNSLG 343
             +    FFS    + T  ++  G+IK+   A  +  +    G+ V      G  + S+ 
Sbjct: 187 MGVNSGAFFSGMEQSVTNHDVRLGVIKSFVFALLVAWICTGRGYFVQTIRGAGFGAESVS 246

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYF 369
           K  T  VV S   V+I D L      
Sbjct: 247 KVTTQAVVMSSISVLIFDYLLTAVLL 272


>gi|46143493|ref|ZP_00135103.2| COG0767: ABC-type transport system involved in resistance to
           organic solvents, permease component [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126208757|ref|YP_001053982.1| hypothetical protein APL_1291 [Actinobacillus pleuropneumoniae L20]
 gi|307248316|ref|ZP_07530341.1| hypothetical protein appser2_12940 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307257357|ref|ZP_07539127.1| hypothetical protein appser10_13550 [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|307259627|ref|ZP_07541351.1| hypothetical protein appser11_14250 [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|307261768|ref|ZP_07543434.1| hypothetical protein appser12_13270 [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|307263956|ref|ZP_07545559.1| hypothetical protein appser13_13640 [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|126097549|gb|ABN74377.1| hypothetical protein APL_1291 [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
 gi|306855186|gb|EFM87364.1| hypothetical protein appser2_12940 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306864207|gb|EFM96120.1| hypothetical protein appser10_13550 [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306866272|gb|EFM98136.1| hypothetical protein appser11_14250 [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306868586|gb|EFN00397.1| hypothetical protein appser12_13270 [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306870718|gb|EFN02459.1| hypothetical protein appser13_13640 [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 234

 Score =  226 bits (577), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 70/234 (29%), Positives = 122/234 (52%), Gaps = 1/234 (0%)

Query: 137 SNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE 196
              G       +F+     LI+Q+Y +GV  + +++L     G V+  QG   L  F AE
Sbjct: 1   MLLGALIGKP-QFRKHTPLLIKQLYVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFAAE 59

Query: 197 IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILI 256
                L+S+  LRE+G ++TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I
Sbjct: 60  TSLGTLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRII 119

Query: 257 SPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316
           +PR WA +IS+P+L  +     I G S+V   +  +    F+S   ++   +++  G IK
Sbjct: 120 APRFWAGVISMPILAAIFTAIGIWGGSLVGVDWKGVDGGSFWSVMQNSVDWSDLINGFIK 179

Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +   A A+  +A+  G+     S  + +  T  VV +  +V+ +D +     F 
Sbjct: 180 SIIFAFAVVWIALFNGYDSVATSEGISQATTRTVVHASLVVLGLDFILTAIMFG 233


>gi|313891881|ref|ZP_07825486.1| conserved hypothetical protein [Dialister microaerophilus UPII
           345-E]
 gi|313119875|gb|EFR43062.1| conserved hypothetical protein [Dialister microaerophilus UPII
           345-E]
          Length = 253

 Score =  226 bits (577), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 74/260 (28%), Positives = 128/260 (49%), Gaps = 9/260 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
              +IGK  +K I        +L   +             K  L    +Q   +GV+  P
Sbjct: 3   FLENIGKYSLKVIAQIGVTILLLIETLKKIN---------KIKLYETCKQCLLLGVNSFP 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +V L    TG V + Q   +L ++GAE  +  +++I   RE+G +L  V++AGR G+AI 
Sbjct: 54  IVFLTLLFTGMVFSAQIVGELVKYGAEFTAGSIVAIGLGRELGPVLCGVVLAGRVGAAIT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AE+G+M++ E+IDA+R M +D V  L+ PR+ A +I LP+L + A  + + G  IV    
Sbjct: 114 AELGTMRVTEQIDALRCMAVDPVEYLVLPRVIACMIMLPILDVFAVTTGVGGGMIVASVT 173

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            +I   +++    S    ++++ G+IK  F    I +     G      +  +GK  T  
Sbjct: 174 GNISSHMYWDSITSFCVASDLYIGMIKTVFFGMIIALTGCDRGLTCETGAEGVGKATTQS 233

Query: 350 VVQSISIVIIIDSLFAIFYF 369
           VV S+ ++ I++ + +   F
Sbjct: 234 VVYSMIMIFIVNYILSTILF 253


>gi|325519291|gb|EGC98730.1| hypothetical protein B1M_40153 [Burkholderia sp. TJI49]
          Length = 255

 Score =  226 bits (577), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 58/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +     +   ++                   + +Q++++G     
Sbjct: 1   MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D ++ +I+PR+WA II++PLL  + N   ++G   V    
Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKNVIAPRMWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+      +  ++  G++K+     A+  +A+ +G+        + +  T 
Sbjct: 174 IGVDPGAFWSQMQGGVEVWADVGNGVLKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255


>gi|170703432|ref|ZP_02894205.1| protein of unknown function DUF140 [Burkholderia ambifaria
           IOP40-10]
 gi|170131663|gb|EDT00218.1| protein of unknown function DUF140 [Burkholderia ambifaria
           IOP40-10]
          Length = 255

 Score =  226 bits (577), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 58/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +     +   ++                   + +Q++++G     
Sbjct: 1   MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ +GR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFSGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D ++ +I+PR+WA II++PLL  + N   ++G   V    
Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKTVIAPRLWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+      +  ++  G+IK+     A+  +A+ +G+        + +  T 
Sbjct: 174 IGVDPGAFWSQMQGGVQVWADVGNGVIKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255


>gi|187479775|ref|YP_787800.1| membrane protein [Bordetella avium 197N]
 gi|115424362|emb|CAJ50915.1| putative membrane protein [Bordetella avium 197N]
          Length = 262

 Score =  226 bits (577), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 60/267 (22%), Positives = 128/267 (47%), Gaps = 8/267 (2%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
           ++       IG  +   I          G +++ +G               + +Q++++G
Sbjct: 2   SALGRFITAIGAWVGDLIRSVGFFTRFFGAILARSGIIFRRP-------RLVSQQVHFIG 54

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
              + ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+
Sbjct: 55  NYSLLIIAVSGLFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTALLFAGRA 114

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           G+++ AEIG MK  E++ A+  M +D +R ++ PR W  +I++P+L  + +   I+G  +
Sbjct: 115 GTSLTAEIGLMKAGEQLAAMEVMAVDPMRRVLVPRFWGGVIAMPILASVFSMVGILGGWV 174

Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           V      +    F+S+  +   +  ++  G+IK+      + +VA+ EG+        + 
Sbjct: 175 VGVVMIGVDTGAFWSQMQAGVDIWDDVLNGVIKSVVFGITVTLVALYEGWQARPTPEGVA 234

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  T  VV     V+ +D L     F 
Sbjct: 235 RATTRTVVVGSLAVLALDFLLTALMFG 261


>gi|237730114|ref|ZP_04560595.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226908720|gb|EEH94638.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 260

 Score =  226 bits (577), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     LIRQ+Y VGV  + ++I+   
Sbjct: 5   ALASLGHRGIKTLRTFGRAGLMLFNAVVGKPEFRKHAPLLIRQLYNVGVLSMLIIIVSGV 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLTI+     I G S+V   +  I    
Sbjct: 125 ATEQLSSLEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   +      ++   LIK+   A  +  +A+  G+     S  + +  T  VV +  
Sbjct: 185 FWSAMQNAVDWRLDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|220904015|ref|YP_002479327.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219868314|gb|ACL48649.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 267

 Score =  226 bits (577), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 12/269 (4%)

Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
           +       IG   ++ I+     A           +  A  +  +      ++Q+Y +G 
Sbjct: 6   APTAFLRRIGSPCLRAIDALGGTAIFF-------FDGLAQIFASRKIFPRTMQQLYIIGS 58

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
               +++LI    G V+  QG + L QFG+       +S+  +RE+G +LTA+M+ GR+G
Sbjct: 59  KSFFLIMLIGVFCGMVLGLQGYYTLVQFGSVGMLGSAVSLTLIRELGPVLTAIMLTGRAG 118

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           S++ AEIG M+I ++IDA+  M ++ +  L+SPR+ A +I+ PLLT + +   IIG  + 
Sbjct: 119 SSMTAEIGVMRITDQIDALDVMDINSMGYLVSPRLVASLIAFPLLTAVFDVIGIIGGYLT 178

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSN 340
                 I    +F R  S+ T+ ++  G IK+      +  +  ++G+        V   
Sbjct: 179 GVLMLGINEGAYFYRIASSVTMTDVAGGFIKSVVFGLLVTTICCRQGYYTNKRRDSVGPE 238

Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           ++G   T+ VV S  +++  D +   F  
Sbjct: 239 AVGNATTSAVVISCVLILAADYVITSFLL 267


>gi|94498322|ref|ZP_01304881.1| ABC transporter, permease protein, putative [Sphingomonas sp.
           SKA58]
 gi|94422202|gb|EAT07244.1| ABC transporter, permease protein, putative [Sphingomonas sp.
           SKA58]
          Length = 303

 Score =  226 bits (577), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 94/301 (31%), Positives = 161/301 (53%), Gaps = 7/301 (2%)

Query: 73  GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHIL 132
           G    +++L  L+     +    Q+                 G++++    D+       
Sbjct: 10  GEREDLQRLIDLV-----RPALEQESSGKAGVTGVLGFFERFGRQVIGTAGDAYQMLVFT 64

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G +I   G    +  + +  +  L+  M   G++G+P+V +++F  GAVIA  G   L+ 
Sbjct: 65  GQLIIALGRTLGNPRRLR--MTPLVAFMQDAGINGLPIVFIMTFFIGAVIALVGTNLLTT 122

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
            G E+F+I L+ +  LRE GV++TA++++GRS S+  A+IGSM++N+E DA++ MG+D  
Sbjct: 123 LGVEVFTIQLVGVAILREFGVVITAILLSGRSASSFAAQIGSMRMNQETDAMQVMGVDRF 182

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
             L+ PRI A ++ +PL+T  A+   + G  +V W   DI    F  R   T  + + + 
Sbjct: 183 DALVIPRILAALLMMPLMTFCADIGGLAGGLLVSWVTIDISPVFFIQRTLETVDIKHFWI 242

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           G+ KAPF+A  I     + G  VG    SLG+ VT+ VVQSI +VI+ D++FA+ + A+ 
Sbjct: 243 GMCKAPFLALIIAAAGCRHGLMVGGDVQSLGQNVTSAVVQSIFMVIMFDAIFAVIFMALD 302

Query: 373 I 373
           +
Sbjct: 303 L 303


>gi|82703861|ref|YP_413427.1| hypothetical protein Nmul_A2748 [Nitrosospira multiformis ATCC
           25196]
 gi|82411926|gb|ABB76035.1| Protein of unknown function DUF140 [Nitrosospira multiformis ATCC
           25196]
          Length = 265

 Score =  226 bits (577), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 68/267 (25%), Positives = 126/267 (47%), Gaps = 8/267 (2%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
                     +G +++  I      +    L +  +G               +IR++Y+ 
Sbjct: 2   PRRIVTGIQSVGHRVIDSIWRLGYASRFFLLTLIKSGTSLRR-------FTLVIRELYFT 54

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           GV  + ++++     G V+  QG   L ++GAE     ++++  LRE+G +++A++ A R
Sbjct: 55  GVQSLIIILVSGLFVGMVLGLQGFETLQRYGAESAVGTMVALSLLRELGPVVSALLFASR 114

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           +GSAI AEIG MK  E++ A+  M +D +  +++PR WA +IS+PLL  L +   I G  
Sbjct: 115 AGSAITAEIGLMKATEQLAAMEMMAVDPIARVVAPRFWAGVISMPLLAALFSAIGIYGGY 174

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
           +V      +    F+S+  S      ++  G+IK      A+  +A+ EG+     +  +
Sbjct: 175 LVAVVLIGVDEGSFWSQMQSAVDFRYDVVNGIIKTCVFGIAVTAIAVFEGYDAAPTAEGV 234

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYF 369
               T  VV S   ++ +D +   F F
Sbjct: 235 SGATTRTVVTSSLAILGLDFILTSFMF 261


>gi|241762837|ref|ZP_04760900.1| protein of unknown function DUF140 [Acidovorax delafieldii 2AN]
 gi|241368012|gb|EER62217.1| protein of unknown function DUF140 [Acidovorax delafieldii 2AN]
          Length = 260

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 60/260 (23%), Positives = 125/260 (48%), Gaps = 8/260 (3%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172
            +G  + + + D    A + G ++             +        Q++++G   + ++ 
Sbjct: 8   DVGLAVRRQLADVGQAARLFGQLVRLFPAAVQRPGLVR-------DQVHFLGNYSLAIIA 60

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
           +     G V+A QG + L  FG+      L+++  LRE+G ++TA++ AGR+G+++ AEI
Sbjct: 61  VSGLFVGFVMALQGYYTLQDFGSTEALGQLVALSLLRELGPVITALLFAGRAGTSLTAEI 120

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           G M+  E++ A+  M +D VR ++ PR WA +I++P+L  + +   ++G  +V      +
Sbjct: 121 GLMRAGEQLSAMEMMAVDPVRRILVPRFWAGVIAMPVLATVFSAVGVMGGWVVAVVMIGL 180

Query: 293 PFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
               F+S+        +++   LIK+      +  VA+ +G+        + +  T  VV
Sbjct: 181 DGGAFWSQMQGGVDVFSDLGNSLIKSLVFGFTVTFVALLQGYTAKPTPEGVSRATTRTVV 240

Query: 352 QSISIVIIIDSLFAIFYFAI 371
            +   V+ +D +     F+I
Sbjct: 241 MASLAVLALDFVLTATMFSI 260


>gi|303230190|ref|ZP_07316958.1| putative membrane protein [Veillonella atypica ACS-134-V-Col7a]
 gi|302515116|gb|EFL57090.1| putative membrane protein [Veillonella atypica ACS-134-V-Col7a]
          Length = 253

 Score =  226 bits (576), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 70/261 (26%), Positives = 127/261 (48%), Gaps = 9/261 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    IG+ ++  +++  +   +L   I       A           +++QM ++GV  +
Sbjct: 2   NWLETIGRNVMAGLSNVGTAMLLLWQTIKQLKMLNA---------WHVLQQMAHLGVDSL 52

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
           P++ L     G V+  Q    L  +GA+     LM++   RE+G +L  V++AGR G+AI
Sbjct: 53  PIISLTLLFAGGVMTLQITDVLITYGAQGTVGGLMAVAMGRELGPILVGVVLAGRVGAAI 112

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG+MK+ E+IDA+R M ++ +  L+ PR+ A +I +P+L        I G   V   
Sbjct: 113 TAEIGTMKVTEQIDALRVMAVNPIGYLVVPRVVACMIMVPILAFYGVVIGIAGGYFVATT 172

Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
              +  A +       +T+++   GLIK+      I +V   +G    + + ++G   T+
Sbjct: 173 IKGLAPATYLDSIQMFSTISDFTLGLIKSSVFGAVIALVGCYKGMHTKMGAEAVGFSTTS 232

Query: 349 CVVQSISIVIIIDSLFAIFYF 369
            VV SI +V +++   +   F
Sbjct: 233 SVVTSIILVFVLNYFLSTLLF 253


>gi|322420104|ref|YP_004199327.1| hypothetical protein GM18_2600 [Geobacter sp. M18]
 gi|320126491|gb|ADW14051.1| protein of unknown function DUF140 [Geobacter sp. M18]
          Length = 258

 Score =  226 bits (576), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 71/265 (26%), Positives = 130/265 (49%), Gaps = 9/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
              +   +GK+++ F       A ++G ++    E           + S++ QM  +G  
Sbjct: 1   MTQVFEPLGKRVLYFYQVMGEMAILMGKIVYFVREA-------PRNIPSILAQMAIIGWD 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PV  +++F  G V+A Q   +L ++G +     ++    +RE+G ++T+ ++AGR GS
Sbjct: 54  TLPVASVMAFFVGMVLALQTGVELQKYGGQNIIGAIVGHSMVRELGPVMTSFLVAGRCGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AE+G M + EEIDA++T+ +D VR L  PR  A II +P L I A+   I G +++ 
Sbjct: 114 AMAAELGVMTVYEEIDALKTLDIDPVRYLAMPRFIACIICVPALVIYADLIGITGGALIS 173

Query: 287 WK--YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
                  + +A ++    +   +  I  GL K+      I +V+   GFA    +  +G+
Sbjct: 174 NLHPQIFVSYATYYDSLTAALKMKEIGIGLTKSMVFGAIIALVSCYVGFATSGGARGIGQ 233

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYF 369
             T  VV S  +++I D +      
Sbjct: 234 STTRSVVLSFMLILIADYVLTRLLM 258


>gi|253995674|ref|YP_003047738.1| hypothetical protein Mmol_0301 [Methylotenera mobilis JLW8]
 gi|253982353|gb|ACT47211.1| protein of unknown function DUF140 [Methylotenera mobilis JLW8]
          Length = 267

 Score =  226 bits (576), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 72/269 (26%), Positives = 137/269 (50%), Gaps = 8/269 (2%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
            N F      +G +++  I    + A +  L I+ +GE               +R++Y+ 
Sbjct: 6   INMFSRFLSGVGNRMIARIWRLGAGARLFMLAIAYSGESFRR-------FHLTLREVYFT 58

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           GV  + ++I+ +F  G V+A QG   L ++G+      L+++  +RE+G ++TA++ AGR
Sbjct: 59  GVMSLLIIIVSAFFVGMVLALQGYNTLQKYGSSEAIGVLVALALVRELGPVVTALLFAGR 118

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           +G+AI AEIG MK  E++ A+  M ++ +  +++PR WA +IS+P+L  L +   ++G  
Sbjct: 119 AGTAITAEIGLMKTTEQLSAMEMMAVNPIARVVAPRFWAGVISMPILAALFSMVGVLGGY 178

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
           +V      +    F+S+  +   +  +I  G+IK+     A  ++A+ EGF     +  +
Sbjct: 179 LVAVPLIGVDDGAFWSQMQANVDVRADIINGVIKSVVFGVACTMIALFEGFDAPPTAEGV 238

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
               T  VV S   V+ +D +   F   +
Sbjct: 239 SHATTRTVVISSLTVLFLDFVLTSFMLVV 267


>gi|302340503|ref|YP_003805709.1| protein of unknown function DUF140 [Spirochaeta smaragdinae DSM
           11293]
 gi|301637688|gb|ADK83115.1| protein of unknown function DUF140 [Spirochaeta smaragdinae DSM
           11293]
          Length = 253

 Score =  226 bits (576), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 60/249 (24%), Positives = 118/249 (47%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                     G       +    +++       ++ Q  ++GV  V ++ L S   G + 
Sbjct: 3   RRLVRTFEQFGSFCLFALDSFRWTFRRPWRPGLVLEQAEHIGVDSVLIIALSSLSIGMIF 62

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           + Q    ++ F AE      +++   RE+  + T++M+  ++GSA+ AEIG+M+++E+ID
Sbjct: 63  SLQVTDLMAMFRAETMVGSAVAMTMGRELAPVFTSLMLVAKNGSAMAAEIGTMRVSEQID 122

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+ TM ++ ++ L+ PRI   II  P+LT L+N   ++G+ +V      +  A +  + +
Sbjct: 123 AMETMSVNPIQYLVVPRIIGSIIVFPILTALSNVVGVLGSYVVSIHMKGVDPAGYLDQLY 182

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
                 +I++G IKA  M   + ++    GF     S  +G   T  VV +   V++ D 
Sbjct: 183 RFVDPVDIWSGFIKAAIMGALVSLICCFFGFTTSGGSKEVGTASTKAVVTASVAVLVSDY 242

Query: 363 LFAIFYFAI 371
           + +     I
Sbjct: 243 IMSDIMLKI 251


>gi|149925791|ref|ZP_01914055.1| ABC-type transporter, permease component involved in toluene
           tolerance [Limnobacter sp. MED105]
 gi|149825908|gb|EDM85116.1| ABC-type transporter, permease component involved in toluene
           tolerance [Limnobacter sp. MED105]
          Length = 261

 Score =  226 bits (576), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 65/263 (24%), Positives = 130/263 (49%), Gaps = 8/263 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           L   +G  ++  I      A  +G +     +              +I Q++++G   + 
Sbjct: 6   LVSRLGAGVIATIAGLGVFARFVGNLFMLLPKALFRP-------RLVIDQIHFIGNYSLV 58

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++++     G V+  QG + L+++GAE     L+++  +RE+G +++A++ AGR+G+++ 
Sbjct: 59  IIVVSGLFVGFVLGLQGYYTLNRYGAEQALGLLVALSLVRELGPVVSALLFAGRAGTSLT 118

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D    +++PR  A +ISLPLL  L +   I G  +V    
Sbjct: 119 AEIGLMKAGEQLTAMEMMAVDPKARIVAPRWIAGLISLPLLAGLFSAVGIFGGYVVGVLL 178

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+  +   +  +I  G+IK+     A+  +A+ +G+A       + +  T 
Sbjct: 179 IGVDSGAFWSQMQAGVDVRDDILNGVIKSVVFGVAVSSIALFQGYACQPTPEGVSRATTR 238

Query: 349 CVVQSISIVIIIDSLFAIFYFAI 371
            VV S   ++ +D +     F+I
Sbjct: 239 TVVISSLTILGLDFVLTALMFSI 261


>gi|317403202|gb|EFV83724.1| membrane protein [Achromobacter xylosoxidans C54]
          Length = 262

 Score =  226 bits (576), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 62/263 (23%), Positives = 128/263 (48%), Gaps = 8/263 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G  +   I          G +++ +G   +           + +Q++++G   +
Sbjct: 6   NAIGALGGWVRTRIAGVGFFTRFFGAMLARSGIALSRP-------RLVSQQIHFIGNYSL 58

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG + L+++GAE     L+++  +RE+G ++TA++ AGR+G+++
Sbjct: 59  LIIAVSGMFVGFVLGLQGYYTLNRYGAEESLGLLVALSLVRELGPVVTALLFAGRAGTSL 118

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG MK  E++ A+  M +D +R ++ PR+W  II++P+L  + +   I+G  +V   
Sbjct: 119 TAEIGLMKAGEQLSAMEVMAVDPMRRVLVPRLWGGIIAMPILAAVFSMVGILGGWVVGVL 178

Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
              +    F+S+      +  ++  G+IK+      + +VA+ EG+        + +  T
Sbjct: 179 MIGVDAGAFWSQMQGGVDVWNDVVNGVIKSLVFGVTVTLVALYEGWQAKPTPEGVARATT 238

Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370
             VV     V+ +D L     F 
Sbjct: 239 RTVVVGSLAVLGLDFLLTALMFG 261


>gi|119510442|ref|ZP_01629575.1| hypothetical protein N9414_01612 [Nodularia spumigena CCY9414]
 gi|119464864|gb|EAW45768.1| hypothetical protein N9414_01612 [Nodularia spumigena CCY9414]
          Length = 265

 Score =  226 bits (576), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 72/255 (28%), Positives = 120/255 (47%), Gaps = 6/255 (2%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K  +   +     A  LG      G+      + K    + + QM  VG   + + +L +
Sbjct: 7   KSSLGAWSQRLLAAIFLG------GQVIVHLLRGKINWRNTVEQMAAVGPGSLFIALLTA 60

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              GAV   Q A +   FGA      ++++   RE+  +LTAV++AGR GSA  AEIG+M
Sbjct: 61  VFVGAVFTIQVAREFINFGAANLVGGVLAVALTRELSPVLTAVVLAGRVGSAFAAEIGTM 120

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           ++ E+IDA+  +  D +  L+ PR+ A  + LP+LT+L+  + I+G  I+    Y I   
Sbjct: 121 RVTEQIDALFILKTDPIDYLVIPRLLACCLMLPILTLLSLITGILGGLIIATSIYGIADT 180

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           VF     +   + +I + LIKA      I ++    G      +  +G+  TT VV S+ 
Sbjct: 181 VFLDSARNLVGIWDIISALIKACCFGLLIAVIGCSWGLTTKGGAKGVGQSTTTAVVTSLL 240

Query: 356 IVIIIDSLFAIFYFA 370
           I+   +   +   F 
Sbjct: 241 IIFTSNFFLSWLMFQ 255


>gi|161523498|ref|YP_001578510.1| hypothetical protein Bmul_0318 [Burkholderia multivorans ATCC
           17616]
 gi|189351729|ref|YP_001947357.1| putative ABC transporter permease [Burkholderia multivorans ATCC
           17616]
 gi|221201636|ref|ZP_03574674.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           multivorans CGD2M]
 gi|221207289|ref|ZP_03580299.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           multivorans CGD2]
 gi|221213427|ref|ZP_03586402.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           multivorans CGD1]
 gi|160340927|gb|ABX14013.1| protein of unknown function DUF140 [Burkholderia multivorans ATCC
           17616]
 gi|189335751|dbj|BAG44821.1| putative ABC transport system permease protein [Burkholderia
           multivorans ATCC 17616]
 gi|221166879|gb|EED99350.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           multivorans CGD1]
 gi|221172877|gb|EEE05314.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           multivorans CGD2]
 gi|221178452|gb|EEE10861.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           multivorans CGD2M]
          Length = 255

 Score =  226 bits (576), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 58/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +     +   ++                   + +Q++++G     
Sbjct: 1   MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D ++ +I+PR+WA II++PLL  + N   ++G   V    
Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKTVIAPRMWAGIITMPLLAAIFNAVGVLGGYFVGVVL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+      +  ++  G++K+     A+  +A+ +G+        + +  T 
Sbjct: 174 IGVDPGAFWSQMQGGVEVWADVGNGVLKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255


>gi|300724964|ref|YP_003714289.1| putative ABC transporter membrane protein [Xenorhabdus nematophila
           ATCC 19061]
 gi|297631506|emb|CBJ92213.1| putative transport protein (ABC superfamily, membrane) [Xenorhabdus
           nematophila ATCC 19061]
          Length = 262

 Score =  225 bits (575), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 122/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +      +       G              +     L L +Q+Y VGV  + ++++  
Sbjct: 6   RALAVLGRRAIEVTASFGRAGFMLFSAIIGKPEPAKQWLLLRQQLYSVGVQSLLIIVVSG 65

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L+ F AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 66  LFIGMVLALQGYLVLTTFSAEGSLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 125

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +++PR WA  IS+PLLT++     I+G +IV   +  I   
Sbjct: 126 KATEQISSLEMMAVDPLRRVVAPRFWAGFISMPLLTLIFVAVGILGGAIVGVDWKGIDAG 185

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   S      ++    +K+   A  +  +A+  G+     S  + +  T  VV + 
Sbjct: 186 FFWSSMQSAVEWKKDLLNCFLKSVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHAS 245

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 246 LAVLGLDFVLTALMFG 261


>gi|161506125|ref|YP_001573237.1| hypothetical protein SARI_04313 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160867472|gb|ABX24095.1| hypothetical protein SARI_04313 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 260

 Score =  225 bits (575), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 71/255 (27%), Positives = 121/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +              G              +F+     L+RQ+Y VGV  + ++++   
Sbjct: 5   ALASLGRSGIKTVRTFGRAGLMLFNAVIGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGV 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLTI+     I G S+V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   +      ++   LIK+   A  +  +A+  G+     S  + +  T  VV +  
Sbjct: 185 FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|329121164|ref|ZP_08249793.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Dialister micraerophilus
           DSM 19965]
 gi|327470327|gb|EGF15786.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Dialister micraerophilus
           DSM 19965]
          Length = 253

 Score =  225 bits (575), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 74/260 (28%), Positives = 128/260 (49%), Gaps = 9/260 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
              +IGK  +K I    +   +L   +             K  L    +Q   +GV+  P
Sbjct: 3   FLENIGKYSLKVIAQIGATILLLIETLKKIN---------KIKLYETCKQCLLLGVNSFP 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +V L    TG V + Q   +L ++GAE  +  +++I   RE+G +L  V++AGR G+AI 
Sbjct: 54  IVFLTLLFTGMVFSAQIVGELVKYGAEFTAGSIVAIGLGRELGPVLCGVVLAGRVGAAIT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AE+G+M++ E+IDA+R M +D V  L+ PR+ A +I LP+L + A    + G  IV    
Sbjct: 114 AELGTMRVTEQIDALRCMAVDPVEYLVLPRVIACMIMLPILDVFAVTIGVGGGMIVASVT 173

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            +I   +++    S    ++++ G+IK  F    I +     G      +  +GK  T  
Sbjct: 174 GNISSHMYWDSITSFCVASDLYIGMIKTVFFGMIIALTGCDRGITCETGAEGVGKATTQS 233

Query: 350 VVQSISIVIIIDSLFAIFYF 369
           VV S+ ++ I++ + +   F
Sbjct: 234 VVYSMIMIFIVNYILSTILF 253


>gi|290476800|ref|YP_003469711.1| putative ABC transporter membrane protein [Xenorhabdus bovienii
           SS-2004]
 gi|289176144|emb|CBJ82949.1| putative transport protein (ABC superfamily, membrane) [Xenorhabdus
           bovienii SS-2004]
          Length = 262

 Score =  225 bits (575), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 122/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +      +   A   G              +       L +Q+Y VGV  + ++++  
Sbjct: 6   RALAALGKRAIEVAASFGRAGFMLFSAIIGKPELAKQWKLLCQQLYSVGVQSLLIIVVSG 65

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V++ QG   L+ F AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 66  LFIGMVLSLQGYLVLTTFSAEGSLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 125

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +I+PR WA  IS+PLL+++     IIG +IV   +  I   
Sbjct: 126 KATEQISSLEMMAIDPLRRVIAPRFWAGFISMPLLSLIFVAVGIIGGAIVGVDWKGIDAG 185

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   S      ++    +K+   A  +  +A+  G+     S  + +  T  VV + 
Sbjct: 186 FFWSSMQSAVDWQKDLLNCFLKSVAFAITVTWIALFNGYDAIPTSEGISRATTRTVVHAS 245

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 246 LAVLGLDFVLTALMFG 261


>gi|325983137|ref|YP_004295539.1| hypothetical protein NAL212_2576 [Nitrosomonas sp. AL212]
 gi|325532656|gb|ADZ27377.1| protein of unknown function DUF140 [Nitrosomonas sp. AL212]
          Length = 265

 Score =  225 bits (575), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 67/267 (25%), Positives = 130/267 (48%), Gaps = 8/267 (2%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
                +    IG ++++ I      +    LV+  +G               +IR++Y+ 
Sbjct: 2   PKRIVSGIQSIGHRVIESIWRLGLASRFFILVLLKSGTSLRR-------FNLVIRELYFT 54

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           GV  + ++++     G V+  QG   L ++G+E     L+++  +RE+G ++ A++ A R
Sbjct: 55  GVLSLIIIVVSGLFVGMVLGLQGYETLQKYGSESAVGTLVALSLVRELGPVVAALLFASR 114

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           +GSAI AEIG MK  E++ A+  M +D +  +++PR WA +IS+P L  + +   + G  
Sbjct: 115 AGSAITAEIGLMKATEQLAAMGMMAVDPIARVVAPRFWAGVISMPFLAAMFSVMGVFGGY 174

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
           +V   +  +    ++S+  S      +I  G IK+ F   A+  +A+ EG+     +  +
Sbjct: 175 LVTVIFIGVDEGSYWSQMQSAVDFRFDILNGFIKSCFFGVAVTAIAVFEGYDAPPTAEGV 234

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYF 369
               T  VV S  +++ +D +   F F
Sbjct: 235 SGATTRTVVTSSLVILGLDFILTAFMF 261


>gi|218885955|ref|YP_002435276.1| hypothetical protein DvMF_0852 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218756909|gb|ACL07808.1| protein of unknown function DUF140 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 267

 Score =  225 bits (575), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 72/270 (26%), Positives = 133/270 (49%), Gaps = 12/270 (4%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
                    +G   ++ + +  +    L   +       AS  +       ++ Q++ +G
Sbjct: 5   PGILAPVTALGAATLRLLGEMGAMFLFLADGLRLI---FASPKQIPK----ILNQVFVIG 57

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
              + V++LI   TG V+  QG + L +FG+E      +++  +RE+G +LTA+M+ GR+
Sbjct: 58  SKSLFVILLIGVFTGMVLGLQGYYTLVKFGSEGLLGAAVALSLIRELGPVLTAIMVTGRA 117

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           GS++ AEIG M+I ++IDA+  M ++ +  L++PRI A +IS PLLT + +   I+G  +
Sbjct: 118 GSSMAAEIGVMRITDQIDALDVMDINPMAYLVAPRIAASLISFPLLTAIFDVVGILGGYV 177

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHS 339
                  I   V+F R  ++  +A+I  G +K+   A  +  V+  +G+       GV  
Sbjct: 178 TGVTLLGINEGVYFYRIQTSVEMADITGGFMKSVLFAVIVATVSCYQGYFTHMRRDGVGP 237

Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
             +    T+ VV S   V++ D +   F  
Sbjct: 238 EGVSNSTTSAVVLSCVFVLVADYVLTSFLL 267


>gi|304413072|ref|ZP_07394545.1| permease component of phospholipid ABC transporter [Candidatus
           Regiella insecticola LSR1]
 gi|304283915|gb|EFL92308.1| permease component of phospholipid ABC transporter [Candidatus
           Regiella insecticola LSR1]
          Length = 260

 Score =  225 bits (575), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 65/256 (25%), Positives = 120/256 (46%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K +      +       G              + +     L++Q++ +G   + ++++  
Sbjct: 4   KALASLGGKAIDVCTSFGRAGWMLFHALVGKPEPRKQWPLLVKQLHNLGTQSLSIIVVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L  + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLILMTYSAEASLGMMVALSLLRELGPVITALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +I+PR WA +IS+PLL  +     I+G +IV   +  I   
Sbjct: 124 KATEQLASLEMMAIDPLRRVIAPRFWAGVISMPLLMAIFIAVGIVGGAIVGVDWKGIDAG 183

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +      ++   LIK+     A+  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQNAIEWRVDLINSLIKSLVFTVAVTWIALFNGYDALPTSEGISQATTRTVVYSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTTLMFG 259


>gi|292490486|ref|YP_003525925.1| hypothetical protein Nhal_0342 [Nitrosococcus halophilus Nc4]
 gi|291579081|gb|ADE13538.1| protein of unknown function DUF140 [Nitrosococcus halophilus Nc4]
          Length = 260

 Score =  225 bits (575), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 67/255 (26%), Positives = 117/255 (45%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +++           LG                      LI QMY VGV  +P++++   
Sbjct: 4   ALLRLGRWGLGTFERLGRGHLFLARLLLGIAALLLRFPLLIAQMYSVGVLTLPIIVVSGA 63

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L  FGAE     ++S+  +RE+G +++A++ AGR+GSA+ AEIG MK
Sbjct: 64  FVGMVLGLQGYNTLVDFGAEESLGVIVSLSLVRELGPVVSALLFAGRAGSALTAEIGLMK 123

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++  +  M +D +R + +PR +A   S+PLL  + +   ++G   V      +    
Sbjct: 124 ATEQLSGMEMMAVDPMRRVAAPRFFAGCFSMPLLAAIFSAVGVLGGYFVGVGLLGVDEGA 183

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S+  +      +I  G+IK+      +  +A+ EG+     S  + +  T  VV S  
Sbjct: 184 FWSQMQANTDWEEDILNGVIKSLVFGLVVTWIAVFEGYDTAPTSEGVARATTRTVVHSAF 243

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 244 AVLALDFVLTALMFG 258


>gi|126668782|ref|ZP_01739730.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Marinobacter sp. ELB17]
 gi|126626765|gb|EAZ97414.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Marinobacter sp. ELB17]
          Length = 259

 Score =  225 bits (575), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 67/255 (26%), Positives = 126/255 (49%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I +   ++       G              K    L  L++Q+Y VGV  + +V++   
Sbjct: 3   AIARLGKNTLDFLASFGRASQFLLGVLVGVPKPSVGLPLLLKQIYSVGVLSLVIVVVSGL 62

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   LS FG+E     ++++  +RE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 63  FIGMVLGLQGYTILSDFGSESAIGQMIALTLVRELGPVVTALLFAGRAGSALTAEIGLMK 122

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  MG+D +R +I+PR+WA  +S+P+L ++ +   I+G  +V  ++  +    
Sbjct: 123 ATEQLSSMEMMGVDPLRRVIAPRLWAGFLSMPILALVFSMVGILGGMLVGVEWLGVFEGS 182

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+    ++     ++  G+IK+         +A+ +G+     S  +    T  VV S  
Sbjct: 183 FWGNMQASVDFRDDVLNGVIKSVVFGFVCAWIAVYQGYDCVPTSAGISSATTKTVVYSSL 242

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 243 AVLGLDFILTAVMFG 257


>gi|308272145|emb|CBX28752.1| UPF0393 membrane protein RBE_1340 [uncultured Desulfobacterium sp.]
          Length = 288

 Score =  225 bits (575), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 80/271 (29%), Positives = 136/271 (50%), Gaps = 12/271 (4%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
            +   N    +GK I+  I +    A                 + F   +  +++Q++++
Sbjct: 25  LSVLINPVTALGKWIIFVIQEMGRIAIFFSKSFYLM-------FSFPFQIKKILQQIHFI 77

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G   V V+ L    TG V+  QG   L +FG+  F   ++++  +RE+G +L A+M+ GR
Sbjct: 78  GSKSVFVICLTGAFTGMVLGLQGYHTLVKFGSAGFLGAVVALSLIRELGPVLAAIMVTGR 137

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           +GSAI AE+G M+I+EEIDA+ TM ++ +R L+SP++ A +IS+PLLT L +   IIG  
Sbjct: 138 AGSAIAAEVGIMRISEEIDALDTMDINPLRFLVSPKLAAALISMPLLTALFDVVGIIGGY 197

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVH 338
           I       I   ++FSR  ++  +A++  G IK+   A  I  V   +G+       G  
Sbjct: 198 ISGSLLLGISGGIYFSRIETSVEMADVTGGFIKSLVFAAVIVTVCCFQGYYTHTRKEGFG 257

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           +  +    T+ VV S   ++I D +      
Sbjct: 258 AKGVSLSTTSAVVISCVTILITDYVLTSLLL 288


>gi|326405508|ref|YP_004285590.1| putative ABC transporter permease [Acidiphilium multivorum AIU301]
 gi|325052370|dbj|BAJ82708.1| putative ABC transporter permease protein [Acidiphilium multivorum
           AIU301]
          Length = 362

 Score =  225 bits (575), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 98/367 (26%), Positives = 174/367 (47%), Gaps = 19/367 (5%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
             V    G   +  ++E     + A+ ++ Q     +DLS    IDT GA L++     +
Sbjct: 14  GPVIALTGPLTAAALTEAWPRAI-AVARAAQG-VMTLDLSRAARIDTSGAALLLALERGH 71

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
            G+ + QG++   E L + +     +      P R+                    +   
Sbjct: 72  DGETRWQGLTPAAEGLIARLRAALPETGAPPPPPRTVRGPGP--------------LRTL 117

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
             +    G  I  T    A     +G   +  R     G   +P+VI++ F+ G ++A Q
Sbjct: 118 GVRIAFFGETILATTGLPARRRFLRG--GNFFRIAERAGAQALPLVIMLGFLIGMILAFQ 175

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            A  + QFGA+I+   L+S+   RE+G LL AV++AGR+GSA  AE+G+M +NEE+ A+ 
Sbjct: 176 SAIPMRQFGADIYVAALVSLSLFRELGPLLAAVILAGRTGSAFAAELGTMMVNEEVAALT 235

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           TMG+D   +L+ PR+ A ++ +P L +  + S ++G   V+      P +   ++    A
Sbjct: 236 TMGIDPGTMLVIPRMAAAMLVMPALALGIDVSGVLGMGFVM-GILGFPPSAIVAQMQMAA 294

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           +  ++  GL+K+     A+G++  + G   G    ++G+  T+ VV  I   I+ID LFA
Sbjct: 295 SPHDVLLGLMKSVVFGAAVGLIGCRAGLTAGGGPRAVGEAATSAVVGGIVATILIDGLFA 354

Query: 366 IFYFAIG 372
           +  + +G
Sbjct: 355 VVLYRLG 361


>gi|297569270|ref|YP_003690614.1| protein of unknown function DUF140 [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925185|gb|ADH85995.1| protein of unknown function DUF140 [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 264

 Score =  225 bits (575), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 70/270 (25%), Positives = 128/270 (47%), Gaps = 13/270 (4%)

Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
           +       +G++ +  + D       L   ++         ++    L  +IRQ+  +G 
Sbjct: 2   ALLANIERVGERTLYVVGDLGRMGGFLARALAG---LFKRPFR----LAEVIRQIRLIGA 54

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
           + +PV+   +  TG V+  QG + L +FGAE     ++++  +RE+G +LTA+M+ GR+G
Sbjct: 55  NSLPVIFFTAAFTGMVLGLQGYYTLRKFGAEGALGTMVALSLVRELGPVLTALMVIGRAG 114

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           SA+ AEIG M+ +E+IDA+  M +D  R LI+P+  A +IS+PLLT++ N   I G  + 
Sbjct: 115 SAMCAEIGIMRNSEQIDALECMAVDPFRYLIAPKFLATVISIPLLTMIFNVVGIFGGYLA 174

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV------GVHS 339
                 +    +F+    +    +I  G IK+      +  +    G+ V      G  +
Sbjct: 175 GVVLLGVNAGSYFAAMEQSVLAQDINMGFIKSLVFGLLVVWICSGRGYFVHQIRGAGFGA 234

Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
             +    T  VV +   V++ + L      
Sbjct: 235 EGVSCATTQAVVLASISVLLWNYLLTAILL 264


>gi|251791365|ref|YP_003006086.1| hypothetical protein Dd1591_3807 [Dickeya zeae Ech1591]
 gi|247539986|gb|ACT08607.1| protein of unknown function DUF140 [Dickeya zeae Ech1591]
          Length = 260

 Score =  225 bits (574), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 63/256 (24%), Positives = 120/256 (46%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +              G              +       L +Q+Y VGV  + ++++  
Sbjct: 4   QALASLGRVGIQVCAAFGRAGLMLFNALVGKPEPARQWPLLRKQLYSVGVQSLLIIMVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  VFIGMVLGLQGYLVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +++PR WA +I++PLLT++     I G ++V   +  I   
Sbjct: 124 KATEQLSSMEMMAVDPLRRVVAPRFWAGVITMPLLTVIFVAVGIWGGALVGVDWKGIDSG 183

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +      ++   ++K+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQNAVAWQKDLLNCVLKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|325579009|ref|ZP_08148965.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Haemophilus
           parainfluenzae ATCC 33392]
 gi|325159244|gb|EGC71378.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Haemophilus
           parainfluenzae ATCC 33392]
          Length = 261

 Score =  225 bits (574), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 72/267 (26%), Positives = 135/267 (50%), Gaps = 8/267 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             ++   +G+ ++KF         +L       G       + +     L++Q++ +GV 
Sbjct: 2   IVDMISSLGRSVIKFFRALGRSGFML------FGALVGKP-QVRKHFPLLVKQLHVLGVQ 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + +++L     G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GS
Sbjct: 55  SLLIILLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGS 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++ ++  M +D +R +I+PR WA +I++P+L +L     I G ++V 
Sbjct: 115 ALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGLIAMPILALLFTAIGIWGGALVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
             +  +    F+S   +  + + +I  G IK+ F A A+  +A+  G+     S  + + 
Sbjct: 175 VDWKGVDAGSFWSVMQNAVSWSYDILNGFIKSVFFAIAVVWIALFNGYDCIPTSEGISQA 234

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAIG 372
            T  VV +  +V+ +D +     F  G
Sbjct: 235 TTRTVVHASLVVLGLDFILTAIMFGAG 261


>gi|253991145|ref|YP_003042501.1| hypothetical protein PAU_03671 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253782595|emb|CAQ85759.1| conserved hypothetical Protein [Photorhabdus asymbiotica]
          Length = 262

 Score =  225 bits (574), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 68/265 (25%), Positives = 126/265 (47%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
                  +G++ ++          +L       G         + + L L +Q++ VGV 
Sbjct: 4   LTQALAALGRRAIEVFASFGRAGFML------FGAIIGRPEPARQWPL-LRQQLFSVGVQ 56

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++++     G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GS
Sbjct: 57  SLLIIVVSGLFIGMVLGLQGYLVLTTYSAEASLGMMVAVSLLRELGPVVTALLFAGRAGS 116

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E+I ++  M +D +R +I+PR WA  IS+PLL+++     I G ++V 
Sbjct: 117 ALTAEIGLMKATEQISSLEMMAIDPLRRVIAPRFWAGFISMPLLSLIFVAVGICGGAMVG 176

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
             +  I    F+S   S      ++    IK+   A  +  +A+  G+     S  + + 
Sbjct: 177 VDWKGIDSGFFWSSMQSAIEWQKDLLNCFIKSVVFAITVTWIALFNGYDAIPTSEGISQA 236

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV +   V+ +D +     F 
Sbjct: 237 TTRTVVHASLAVLGLDFVLTALMFG 261


>gi|237809666|ref|YP_002894106.1| hypothetical protein Tola_2931 [Tolumonas auensis DSM 9187]
 gi|237501927|gb|ACQ94520.1| protein of unknown function DUF140 [Tolumonas auensis DSM 9187]
          Length = 259

 Score =  225 bits (574), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 73/253 (28%), Positives = 125/253 (49%), Gaps = 1/253 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I +            G       +      + +     LI+Q+Y VGV  V ++++    
Sbjct: 6   ISRLGRRGIQSLTATGRAGIMLYQALVGRPEPRKHFPLLIQQLYVVGVESVLIILVSGLF 65

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L  FGAE     L+++  LRE+G +++A++ AGR+GSA+ AEIG MK 
Sbjct: 66  IGMVLGFQGYRVLVDFGAEASLGPLVALSLLRELGPVVSALLFAGRAGSALTAEIGLMKA 125

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R ++SPR WA  ISLPLL+++  F  IIG  +V   +       F
Sbjct: 126 TEQLSSLEMMAVDPLRRIVSPRFWAGAISLPLLSLIFCFIGIIGGKLVGVDWLGADEGGF 185

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   ++     +I  G+IK+   A  +  VA+  G+     +  + +  T  VV +  +
Sbjct: 186 WSAMQASVDWQEDIVQGIIKSVAFALVVTWVALFNGYDSLPTAAGISQATTRTVVHASLL 245

Query: 357 VIIIDSLFAIFYF 369
           V+ +D +     F
Sbjct: 246 VLGLDFVMTAVMF 258


>gi|53803964|ref|YP_114401.1| hypothetical protein MCA1968 [Methylococcus capsulatus str. Bath]
 gi|53757725|gb|AAU92016.1| conserved hypothetical protein TIGR00056 [Methylococcus capsulatus
           str. Bath]
          Length = 263

 Score =  225 bits (574), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 73/267 (27%), Positives = 124/267 (46%), Gaps = 8/267 (2%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
           N        +G+  +  I         +  V++      A        L  LI QMY VG
Sbjct: 2   NIVLKPFQLLGQSALVGIRKLGRAHLFILHVLTGLPGLVAR-------LDLLIVQMYSVG 54

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
           V  + ++++     G V+  QG + LS FGAE     +++   +RE+G ++TA++ AGR+
Sbjct: 55  VLSILLIMISGLFVGMVLGLQGYYVLSDFGAEESLGVMVAASLVRELGPVVTALLFAGRA 114

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           GSA+ AEIG MK  E++  +  M +D V+ +I+PR +A ++S+PLL  L +   ++G   
Sbjct: 115 GSALTAEIGLMKATEQLSGMEMMAVDPVKRIIAPRYFAGVVSMPLLAALFSIIGVLGGYF 174

Query: 285 VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           V      +    F S+  +      +I  G IK+      +  +A+ EG+     S  + 
Sbjct: 175 VGVGLLGVDEGAFRSQMQAKIDFDEDIVNGFIKSLVFGAVVTWIAVFEGYDATPTSEGVS 234

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  T  VV S   V+  D +     F 
Sbjct: 235 RATTRSVVYSAFAVLGCDFVLTALMFG 261


>gi|148265726|ref|YP_001232432.1| hypothetical protein Gura_3706 [Geobacter uraniireducens Rf4]
 gi|146399226|gb|ABQ27859.1| protein of unknown function DUF140 [Geobacter uraniireducens Rf4]
          Length = 258

 Score =  225 bits (574), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 73/265 (27%), Positives = 128/265 (48%), Gaps = 9/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
              +   IGKK++ F         +LG  I    E           + S+  QM  +G  
Sbjct: 1   MTGVFDRIGKKVILFHEIVGEMLILLGQTIYFFREA-------PRNIASIFAQMAIIGYE 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PV  +++F  G V+A Q   +L ++G++     ++    +RE+G ++T+ ++AGR+GS
Sbjct: 54  TLPVASVMAFFVGMVLALQTGVELQKYGSQNIIGAIVGHSMVRELGPVMTSFLVAGRAGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AE+G M + EEIDA++T+ ++ VR L  PR  A I+ LP L I ++F  I G +I+ 
Sbjct: 114 AMAAELGVMTVYEEIDALKTLDINPVRYLAMPRFIACIVCLPALVIYSDFIGITGGAIIS 173

Query: 287 WKY--YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
             +    + ++ ++    +      I  GLIKA      I +V+   GF     +  +G 
Sbjct: 174 NLHPKIFVSYSTYYDSLTAALKFHEIGIGLIKAFVFGAIIALVSCYIGFKTSGGARGIGI 233

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYF 369
             T  VV S  ++++ D        
Sbjct: 234 STTRSVVLSFMLILVADYFLTRILM 258


>gi|92114341|ref|YP_574269.1| hypothetical protein Csal_2219 [Chromohalobacter salexigens DSM
           3043]
 gi|91797431|gb|ABE59570.1| protein of unknown function DUF140 [Chromohalobacter salexigens DSM
           3043]
          Length = 260

 Score =  225 bits (574), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 66/256 (25%), Positives = 127/256 (49%), Gaps = 2/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
             IV     +      LG  +    +        +      +RQM+++GV  + +V++  
Sbjct: 3   HHIVALGRGTLETVSALGRAVIFLVQAAWGVPS-REGWHLWLRQMHFIGVMSLAIVLVSG 61

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L  FGAE     ++++  LRE+  ++ A++ AGR+GSA+ AEIG M
Sbjct: 62  LFIGMVLGLQGFTILVDFGAEDALGQMVALSLLRELAPVVAALLFAGRAGSALTAEIGLM 121

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D +R +++PR+WA  +S+PLLT+  +   I G  +V  ++  +   
Sbjct: 122 KATEQLTSMEMIGVDPLRRIVAPRLWAGFVSMPLLTVGFSVVGIWGGYLVGVQWLGVFDG 181

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            ++S   S+     +I  G++K+      +  +A+ +G+ +   S  + +  T  VV S 
Sbjct: 182 SYWSNMQSSVAFVDDILNGMLKSVVFGLVVTWIAVFQGYDLVPTSEGISRATTRTVVYSS 241

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 242 LAVLGLDFVLTALMFG 257


>gi|309785522|ref|ZP_07680153.1| toluene tolerance protein Ttg2B [Shigella dysenteriae 1617]
 gi|308926642|gb|EFP72118.1| toluene tolerance protein Ttg2B [Shigella dysenteriae 1617]
          Length = 235

 Score =  225 bits (574), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 70/233 (30%), Positives = 119/233 (51%), Gaps = 1/233 (0%)

Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198
                    +F+     L+RQ+Y VGV  + ++++     G V+  QG   L+ + AE  
Sbjct: 2   LFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGVFIGMVLGLQGYLVLTTYSAETS 61

Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258
              L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+  E++ ++  M +D +R +ISP
Sbjct: 62  LGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISP 121

Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKA 317
           R WA +ISLPLLTI+     I G S+V   +  I    F+S   +      ++   LIK+
Sbjct: 122 RFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDSGFFWSAMQNAVDWRMDLVNCLIKS 181

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
              A  +  +++  G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 182 VVFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 234


>gi|218961384|ref|YP_001741159.1| hypothetical protein CLOAM1090 [Candidatus Cloacamonas
           acidaminovorans]
 gi|167730041|emb|CAO80953.1| conserved hypothetical protein; putative membrane protein
           [Candidatus Cloacamonas acidaminovorans]
          Length = 263

 Score =  225 bits (574), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 67/248 (27%), Positives = 117/248 (47%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N S +    +G      G+               + Q   +G   + +++L +  TG V 
Sbjct: 14  NMSSNLFAGIGEYTIFVGKCLGKIPSLFKRYQEFLIQFKRIGFDSLFLILLTAAFTGLVT 73

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A Q  +Q   +        L+    + E+  +LTA+++ G+ G++I AEIG+M+++E+ID
Sbjct: 74  ALQAVYQSKGYVPVNLLSVLIGKSTMIELAPVLTALVLTGKVGASIAAEIGTMRVSEQID 133

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+ +M +D    L  PRI A +++ PL+T+ AN   II A    W  Y I +  FF+   
Sbjct: 134 ALESMNIDPYEFLYMPRILAGVLAFPLVTVFANAVGIICAWYFSWLRYGIHYYTFFNNMR 193

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           S    ++++ GL K+      I   A   G      +  +GK  T+ VV S   ++++D 
Sbjct: 194 SYFIPSDLWGGLAKSFVFGFIITSFACYHGDRCFGGAEGVGKATTSTVVYSSVAILVMDF 253

Query: 363 LFAIFYFA 370
           + A F F 
Sbjct: 254 IVAWFLFG 261


>gi|149178242|ref|ZP_01856835.1| probable permease of ABC transporter [Planctomyces maris DSM 8797]
 gi|148842891|gb|EDL57261.1| probable permease of ABC transporter [Planctomyces maris DSM 8797]
          Length = 280

 Score =  225 bits (574), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 64/257 (24%), Positives = 126/257 (49%), Gaps = 7/257 (2%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           L + +G+ ++  +            ++     +  +    +  L S    MY++G+  +P
Sbjct: 13  LIHGLGRGVINTVCLLGDLFLFGWEMLG----WIITRLPPRSNLWSC---MYHIGIQSIP 65

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V+++     G V+A Q   Q      E     +++I  + E+G +L A+M+AGR G+++ 
Sbjct: 66  VILITGGFIGMVLAVQSYDQFKLMHLENQIGAVIAISLVEELGPVLAAIMLAGRVGTSMS 125

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AE+G+M++ E+IDA+R +G D +  L+ PR  A  + +PLLTI+A+   I+G      + 
Sbjct: 126 AELGTMRVTEQIDALRALGADPIHYLVVPRFLACCLLIPLLTIVADAVGILGGWFFSTQI 185

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
             +    ++          ++  G+ K+ F   AI +++   GF  G  +  +GK  T  
Sbjct: 186 LGVDSFYYWHYSEQFVYAYDVMGGIFKSFFFGAAISLISCHRGFHCGAGAEGVGKAATEA 245

Query: 350 VVQSISIVIIIDSLFAI 366
            V S  +++I+D L  +
Sbjct: 246 FVYSFIVIMILDFLLGV 262


>gi|270159893|ref|ZP_06188549.1| toluene tolerance protein Ttg2B [Legionella longbeachae D-4968]
 gi|289165353|ref|YP_003455491.1| toluene transporter subunit: membrane component of ABC superfamily
           [Legionella longbeachae NSW150]
 gi|269988232|gb|EEZ94487.1| toluene tolerance protein Ttg2B [Legionella longbeachae D-4968]
 gi|288858526|emb|CBJ12407.1| toluene transporter subunit: membrane component of ABC superfamily
           [Legionella longbeachae NSW150]
          Length = 260

 Score =  225 bits (574), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 67/263 (25%), Positives = 124/263 (47%), Gaps = 8/263 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
                IG +  + + D  S    L L++                   +  Q+Y+VGV   
Sbjct: 3   EFITRIGSRGSRILQDLGSSGIFLFLMLF-------RKPDISKLWSLVRYQIYFVGVLSC 55

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++I+ +   G V+  QG   L +FGA      L+++   RE+G +++A++ AGR+GSA+
Sbjct: 56  LIIIVSALFIGMVVGLQGYNTLQKFGASSQLGQLLALSISRELGPVISALLFAGRAGSAL 115

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG MK  E++ ++  MG+D +  +I PR  A  I+LPLL ++ +  A+ G   +   
Sbjct: 116 TAEIGLMKATEQLSSMDMMGVDPLGRVIYPRFLAGFIALPLLALIFSAVAVFGGYFIGVH 175

Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +    F+S   +      ++ +G+IK+   A  +  +++ +GF     +  + +  T
Sbjct: 176 WLGVDAGSFWSNMQAAVDFRIDVLSGIIKSLVFAFVVTWISVFQGFECVPTAEGISQATT 235

Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370
             VV S   V+ +D L       
Sbjct: 236 KTVVYSSLAVLGLDFLLTAMMIG 258


>gi|311103421|ref|YP_003976274.1| toluene tolerance protein Ttg2B [Achromobacter xylosoxidans A8]
 gi|310758110|gb|ADP13559.1| toluene tolerance protein Ttg2B [Achromobacter xylosoxidans A8]
          Length = 262

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 60/263 (22%), Positives = 130/263 (49%), Gaps = 8/263 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G  +   ++         G +++ +G   +           + +Q++++G   +
Sbjct: 6   NAIGALGGWVRTRVSGIGYFTRFFGAMLARSGIALSRP-------RLVSQQVHFIGNYSL 58

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++
Sbjct: 59  LIIAVSGMFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTALLFAGRAGTSL 118

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG MK  E++ A+  M +D +R ++ PR+W  II++P+L  + +   I+G  +V   
Sbjct: 119 TAEIGLMKAGEQLAAMEVMAVDPIRRVLVPRLWGGIIAMPILAAVFSMVGILGGWVVGVL 178

Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
              +    F+S+  +   +  ++  G+IK+      + +VA+ EG+        + +  T
Sbjct: 179 LIGVDAGAFWSQMQNGVDVWKDVANGVIKSLVFGVTVTLVALYEGWQAKPTPEGVARATT 238

Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370
             VV     V+ +D L     F 
Sbjct: 239 RTVVVGSLAVLGLDFLLTALMFG 261


>gi|330721190|gb|EGG99301.1| Uncharacterized ABC transporter2C permease component YrbE [gamma
           proteobacterium IMCC2047]
          Length = 225

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 66/223 (29%), Positives = 125/223 (56%), Gaps = 1/223 (0%)

Query: 149 FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL 208
            +  L  L++Q+Y VGV  +P++I+     G V++ QG   L  +G+E     ++S+  +
Sbjct: 1   MRKGLPLLLKQLYAVGVLSLPIIIVSGLFIGMVMSLQGYSILVDYGSEQAVGQMVSLSLV 60

Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268
           RE+G ++TA++ AGR+GS++ AEIG MK  E+I ++  +G+D +R +++PR+ A  I+LP
Sbjct: 61  RELGPVVTALLFAGRAGSSLTAEIGLMKATEQITSLEMLGVDPLRYVMAPRLLAGFIALP 120

Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIV 327
           LLT++ N   I G ++V   +  +    F++   +      ++  G++K+   A  +  +
Sbjct: 121 LLTLIFNVVGIWGGALVAVDWLGVYDGSFWANMQAATDFRTDVVNGMVKSIAFAFVVTWI 180

Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           A+ +G  +   S  +G+  T  VV S   V+ +D +     F 
Sbjct: 181 AVFQGHDLTPTSEGIGRATTKTVVYSSLAVLGLDFVLTAVMFG 223


>gi|257092255|ref|YP_003165896.1| hypothetical protein CAP2UW1_0620 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257044779|gb|ACV33967.1| protein of unknown function DUF140 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 271

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 59/272 (21%), Positives = 133/272 (48%), Gaps = 8/272 (2%)

Query: 99  QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158
           +R        +    IG  +   +      +    +++  +G+               IR
Sbjct: 3   KRESGPGPLLSTIASIGHHVTDALQRLGFASRFFVMLLLCSGQSFRRP-------NLTIR 55

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           ++YY G   + ++++     G V+  QG   L ++G+      L+++  +RE+G ++ A+
Sbjct: 56  EIYYSGFQSLLIIMVSGLFIGMVLGMQGYETLQRYGSADALGILVALSLVRELGPVVAAL 115

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           + A R+GS+I AEIG MK  E++ A+  M ++ +  +++PR W  +IS+PLL  L + + 
Sbjct: 116 LFASRAGSSITAEIGLMKATEQLTAMDMMAVNPIARVVAPRFWGGVISMPLLAALFSATG 175

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           + G  ++   +  +    F+S+  ++     +I++G++K+     A+ ++A+ EG+    
Sbjct: 176 VFGGYLIGVVFIGVDDGAFWSQMQASVDFRYDIWSGIVKSFVFGVAVSLIAVFEGYDALP 235

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
            +  +   + + VV+S   ++ +D +   F F
Sbjct: 236 TAEGVSSSIKSTVVKSALAILALDFVLTSFMF 267


>gi|124516678|gb|EAY58186.1| putative integral membrane protein [Leptospirillum rubarum]
          Length = 255

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 68/244 (27%), Positives = 127/244 (52%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                I G ++  T       ++      + + Q+  VG    PVV++ +  TG V+A Q
Sbjct: 12  IGLFSISGDLLITTVTALTGMFRPAFLWWNFLVQLVKVGADSTPVVLVTALFTGMVLALQ 71

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
                 +F AE     ++S+   RE+G ++T +M++GRSGS++ AE+G+M++ E+IDA+ 
Sbjct: 72  AWIGFQKFNAEGMVGAVVSLSLTRELGPVITGLMVSGRSGSSMAAELGTMRVTEQIDALE 131

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           ++ +  +  L++PR +A +I+LPLLT++A+F  I+G   V      +P  V+        
Sbjct: 132 SLAVSPLVYLVTPRFYAGLIALPLLTVMADFVGIVGGYFVAVNLLGLPSNVYVKGIARYV 191

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            L + ++GL+KA      + I +   G+     +  +G+ VT  VV S   ++++D    
Sbjct: 192 NLHDFYSGLVKACIFGAVLSIFSCYMGYHARGGAAGVGQSVTKAVVSSSMAILVLDYFLT 251

Query: 366 IFYF 369
            + F
Sbjct: 252 AWLF 255


>gi|311277833|ref|YP_003940064.1| hypothetical protein Entcl_0502 [Enterobacter cloacae SCF1]
 gi|308747028|gb|ADO46780.1| protein of unknown function DUF140 [Enterobacter cloacae SCF1]
          Length = 260

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 72/255 (28%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++I+   
Sbjct: 5   ALAALGHRGIKTTAAFGRAGLMLFNAVVGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGV 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLTI+     I G S+V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F++   +      ++   LIK+   A  +  +A+  G+     S  + +  T  VV S  
Sbjct: 185 FWTAMQNAVEWRMDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|312887098|ref|ZP_07746702.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM
           18603]
 gi|311300410|gb|EFQ77475.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM
           18603]
          Length = 256

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 130/255 (50%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +  I D+ S     G +   TG F +   + +  +  L+ Q Y +G    P++ L  F+ 
Sbjct: 1   MALIEDTRSFLDETGSMAKFTGHFFSHGLRPRFEVKELLGQCYTIGYKSFPLIGLTGFIM 60

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G V+  Q    L  +G +     ++ I  +REIG ++TA++ AG+ GS+I AE+GSMK+ 
Sbjct: 61  GLVLTMQLRPSLVSYGVQSELPVMVGIAIVREIGPVITALIFAGKIGSSIGAELGSMKVT 120

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           E+IDA+   G +  + L++ R+ A  + LP+LT+L +  ++ GA I +          FF
Sbjct: 121 EQIDAMEVSGTNPYKYLVATRVLATTLMLPILTVLGDAISLFGAYIGVNLSSVTSLHFFF 180

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           ++   + + ++I   + K  F   A+GI+   +GF     +  +G    + VV S  ++ 
Sbjct: 181 TQVFQSLSFSDILPAITKTFFFGFAVGIIGCYKGFNSSKGTQGVGVSANSAVVLSSVLIF 240

Query: 359 IIDSLFAIFYFAIGI 373
           IID L   F   +G+
Sbjct: 241 IIDLLAVQFTNILGL 255


>gi|320322486|gb|EFW78579.1| putative ABC transport system permease protein [Pseudomonas
           syringae pv. glycinea str. B076]
          Length = 265

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 69/267 (25%), Positives = 138/267 (51%), Gaps = 8/267 (2%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
            S  +    +G+  +  +         L   +   G   +S          L+RQ+Y VG
Sbjct: 4   KSLMDRVRLLGRSAIDIVTVLGRSGLFLVNALLGRGGAGSS-------FQLLVRQLYSVG 56

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
           V  + ++++     G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+
Sbjct: 57  VVSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRA 116

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  IS+P+L ++ +   I GAS 
Sbjct: 117 GSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFSVVGIWGASW 176

Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           V   +  +    F+S   ++ +   ++  G+IK+   A  +  +A+ +G+     S  + 
Sbjct: 177 VAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCEPTSEGIS 236

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  T  VV +   V+ +D +     F 
Sbjct: 237 RATTRTVVYASLAVLGLDFILTALMFG 263


>gi|91786696|ref|YP_547648.1| hypothetical protein Bpro_0794 [Polaromonas sp. JS666]
 gi|91695921|gb|ABE42750.1| protein of unknown function DUF140 [Polaromonas sp. JS666]
          Length = 264

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 132/264 (50%), Gaps = 8/264 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
            +  ++G      + +    A ++  +++ TG   A     +        Q++++G   +
Sbjct: 8   RMLSNLGFGTRSQLAELGHAARLMSRLLALTGPALARFGLVR-------DQIFFLGNYSL 60

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG + L ++G+      L+++  +RE+G ++TA++ AGR+G+++
Sbjct: 61  AIITVSGLFVGFVLGLQGYYTLQRYGSSEALGLLVALSLVRELGPVVTALLFAGRAGTSL 120

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG MK  E++ A+  M +D VR +++PR W  +I++PLL  + +   IIG  +V   
Sbjct: 121 TAEIGLMKAGEQLSAMEMMAVDPVRRILAPRFWGGVIAMPLLAAVFSAVGIIGGWVVGVV 180

Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
              +    F+S+  +   +  ++  G+IK+      +  VA+ +GF        + +  T
Sbjct: 181 MIGVDAGSFWSQMQAGVDVWRDVGNGVIKSFVFGVTVTFVALHQGFEAQPTPEGVSRATT 240

Query: 348 TCVVQSISIVIIIDSLFAIFYFAI 371
             VV +   V+ +D L   + F++
Sbjct: 241 RTVVVASLAVLGLDFLLTAWMFSL 264


>gi|16762074|ref|NP_457691.1| hypothetical protein STY3491 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|16766607|ref|NP_462222.1| transport protein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|29143563|ref|NP_806905.1| hypothetical protein t3229 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56415241|ref|YP_152316.1| hypothetical protein SPA3179 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|62181820|ref|YP_218237.1| ABC transporter membrane protein [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161616322|ref|YP_001590287.1| hypothetical protein SPAB_04130 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167552038|ref|ZP_02345791.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|167994505|ref|ZP_02575596.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168231923|ref|ZP_02656981.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|168238014|ref|ZP_02663072.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|168243148|ref|ZP_02668080.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|168262675|ref|ZP_02684648.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|168463462|ref|ZP_02697379.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|168819618|ref|ZP_02831618.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|194443328|ref|YP_002042570.1| toluene ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194449369|ref|YP_002047341.1| toluene ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194470890|ref|ZP_03076874.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|194737604|ref|YP_002116262.1| toluene ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197251770|ref|YP_002148237.1| toluene ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197262344|ref|ZP_03162418.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|197364171|ref|YP_002143808.1| hypothetical protein SSPA2967 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|200388463|ref|ZP_03215075.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|204931189|ref|ZP_03221983.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|205354213|ref|YP_002228014.1| hypothetical protein SG3202 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207858560|ref|YP_002245211.1| hypothetical protein SEN3145 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|213163395|ref|ZP_03349105.1| hypothetical protein Salmoneentericaenterica_26575 [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213420406|ref|ZP_03353472.1| hypothetical protein Salmonentericaenterica_22736 [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
 gi|213426645|ref|ZP_03359395.1| hypothetical protein SentesTyphi_14148 [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213618602|ref|ZP_03372428.1| hypothetical protein SentesTyp_19883 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213646981|ref|ZP_03377034.1| hypothetical protein SentesTy_06536 [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213857745|ref|ZP_03384716.1| hypothetical protein SentesT_21720 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|224585109|ref|YP_002638908.1| hypothetical protein SPC_3382 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|238910106|ref|ZP_04653943.1| hypothetical protein SentesTe_03070 [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|289825822|ref|ZP_06544990.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-3139]
 gi|25319166|pir||AG0904 probable membrane protein STY3491 [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16421869|gb|AAL22181.1| putative ABC superfamily transport protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|16504377|emb|CAD07829.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29139198|gb|AAO70765.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56129498|gb|AAV79004.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|62129453|gb|AAX67156.1| putative ABC superfamily (membr) transport protein [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|161365686|gb|ABX69454.1| hypothetical protein SPAB_04130 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401991|gb|ACF62213.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194407673|gb|ACF67892.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|194457254|gb|EDX46093.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|194713106|gb|ACF92327.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|195633368|gb|EDX51782.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|197095648|emb|CAR61216.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197215473|gb|ACH52870.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|197240599|gb|EDY23219.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|197289146|gb|EDY28515.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|199605561|gb|EDZ04106.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|204319956|gb|EDZ05162.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|205273994|emb|CAR39000.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205323252|gb|EDZ11091.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|205327645|gb|EDZ14409.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205333943|gb|EDZ20707.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|205337808|gb|EDZ24572.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|205343404|gb|EDZ30168.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|205348318|gb|EDZ34949.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|206710363|emb|CAR34721.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224469637|gb|ACN47467.1| hypothetical protein SPC_3382 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261248477|emb|CBG26314.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267995511|gb|ACY90396.1| putative transport protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301159861|emb|CBW19380.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312914339|dbj|BAJ38313.1| toluene ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. T000240]
 gi|320087757|emb|CBY97521.1| UPF0393 inner membrane protein yrbE [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321225264|gb|EFX50323.1| Uncharacterized ABC transporter, permease component YrbE
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. TN061786]
 gi|322615316|gb|EFY12237.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322618325|gb|EFY15216.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322622870|gb|EFY19714.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322626808|gb|EFY23605.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322631377|gb|EFY28137.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322635356|gb|EFY32070.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322643355|gb|EFY39919.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322647073|gb|EFY43574.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322648876|gb|EFY45321.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322655068|gb|EFY51379.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322657671|gb|EFY53939.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322664167|gb|EFY60365.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322667450|gb|EFY63612.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674698|gb|EFY70790.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322675669|gb|EFY71742.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322682305|gb|EFY78328.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322684908|gb|EFY80906.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|322716309|gb|EFZ07880.1| putative phospholipid ABC transporter permease protein mlaE
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
 gi|323131672|gb|ADX19102.1| putative transport protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|323195887|gb|EFZ81058.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323199004|gb|EFZ84101.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323204296|gb|EFZ89305.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323207643|gb|EFZ92590.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323211304|gb|EFZ96148.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323214754|gb|EFZ99503.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323221234|gb|EGA05660.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323224025|gb|EGA08318.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323230326|gb|EGA14445.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323233302|gb|EGA17396.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323239339|gb|EGA23389.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323242410|gb|EGA26436.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323246920|gb|EGA30886.1| toluene transporter subunit: membrane component of ABC superfamily
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2009159199]
 gi|323254147|gb|EGA37967.1| toluene transporter subunit: membrane component of ABC superfamily
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008282]
 gi|323255264|gb|EGA39041.1| toluene transporter subunit: membrane component of ABC superfamily
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008283]
 gi|323262727|gb|EGA46283.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323264037|gb|EGA47545.1| toluene transporter subunit: membrane component of ABC superfamily
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008285]
 gi|323269423|gb|EGA52878.1| toluene transporter subunit: membrane component of ABC superfamily
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008287]
 gi|326625062|gb|EGE31407.1| putative phospholipid ABC transporter permease protein mlaE
           [Salmonella enterica subsp. enterica serovar Dublin str.
           3246]
 gi|326629335|gb|EGE35678.1| Putative membrane protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 260

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 72/255 (28%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++I+   
Sbjct: 5   ALAALGHSGIKTVRTFGRAGLMLFNAIIGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGV 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLTI+     I G S+V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   +      ++   LIK+   A  +  +A+  G+     S  + +  T  VV +  
Sbjct: 185 FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|15606674|ref|NP_214054.1| hypothetical protein aq_1530 [Aquifex aeolicus VF5]
 gi|2983906|gb|AAC07457.1| hypothetical protein aq_1530 [Aquifex aeolicus VF5]
          Length = 340

 Score =  224 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 101/366 (27%), Positives = 173/366 (47%), Gaps = 33/366 (9%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           V +  G   +  I  +           I  +   +DLS + ++DT GA  +   +++ + 
Sbjct: 8   VLKVEGELTAENIKSL----------KIPKNIEKIDLSDLKKLDTFGATFLALLIKENNI 57

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
            ++         +L  L+    +   +  + + SF                   + +  S
Sbjct: 58  PLERVEGGEKHVELIKLVLDNLKLPKEIPEKKVSFS------------------LKNLFS 99

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               LGL + ++ ++            +  +++   G+  V +++ +SF+ G VIA Q A
Sbjct: 100 FPEFLGLFLIHSFKYIKQ-----FEFSAFFKELQTSGLGSVLILVSLSFLIGVVIAYQSA 154

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA IF +DL+ I   RE+  LLT +++AGR  S   A +G  KINEEIDA+R M
Sbjct: 155 VQLRAFGAGIFIVDLVGISTFRELAPLLTGIILAGRVSSGYTANVGLRKINEEIDALRVM 214

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GL  V +L+ PR+ A +I  PLLT L+  + ++G +I+   +  I    FF +       
Sbjct: 215 GLSPVVLLVLPRVLASLIYTPLLTSLSAVAMLLGGAIIAQVFLGIGVEEFFKKLPEAVAK 274

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            ++F G +K PF   AI +  +  GF       SLG  V   VV  IS++I++D++F+I 
Sbjct: 275 EDLFAGYVKTPFFGVAIALNGVYYGFLTDPKPESLGYSVMRSVVTGISVIILLDAVFSII 334

Query: 368 YFAIGI 373
           +  +GI
Sbjct: 335 FLRLGI 340


>gi|322435258|ref|YP_004217470.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX9]
 gi|321162985|gb|ADW68690.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX9]
          Length = 259

 Score =  224 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 71/233 (30%), Positives = 123/233 (52%)

Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198
            G   A+ +    +   +  QM  +GV  +P+V+L  F TG V+A Q A  L QFG+   
Sbjct: 24  AGRGVANLFSPPVYWDDIFTQMDSIGVGSLPIVVLTGFFTGCVLALQSATALKQFGSISL 83

Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258
           +  L+++  ++E+G +LT +M++GR+ S + +E+GSM + E+IDA+R +G D +R L++P
Sbjct: 84  TGSLVALSMVKELGPVLTGLMVSGRNASGMASELGSMMVTEQIDAMRALGTDPIRKLVTP 143

Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318
           RI A ++ L  LTIL++   I G ++V      +  + +    + +    ++  GL K  
Sbjct: 144 RIIATVVMLFFLTILSDAVGIAGGALVSVTILGLNLSSYLHTSYQSLLYGDVVQGLTKPL 203

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           F A  I  V    G      +  +GK  T  VV S   +I++D L +     +
Sbjct: 204 FSAFIIATVGCFFGLKTKGGTQGVGKATTQAVVYSSVFIIVVDFLVSRLMIGL 256


>gi|224369296|ref|YP_002603460.1| ABC-type transporter involved in resistance to organic solvents,
           permease protein [Desulfobacterium autotrophicum HRM2]
 gi|223692013|gb|ACN15296.1| ABC-type transporter involved in resistance to organic solvents,
           permease protein [Desulfobacterium autotrophicum HRM2]
          Length = 269

 Score =  224 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 71/273 (26%), Positives = 128/273 (46%), Gaps = 13/273 (4%)

Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162
             N F      +G   + F+         L        +     ++    L  +I  +++
Sbjct: 4   KINEFTGRVGALGSNTLDFVQGIGRAWLFLSQ---GLFQLLIPPFQ----LSKIIEHIWF 56

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           +G+  + V+IL    TG V+  QG + L +FG+E      +++  +RE+G +LTA+M+  
Sbjct: 57  IGMKSMMVIILTGIFTGMVLGLQGYYTLVRFGSEGMLGSAVALTLIRELGPVLTAIMVTA 116

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           R+GSA+ AE+G M+I+++IDA+ TM ++ VR L +PRI A +IS PLLT L +   I G 
Sbjct: 117 RAGSAMAAELGVMRISQQIDALDTMDINPVRYLFTPRIIAAVISFPLLTALFDVIGIFGG 176

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV------G 336
            +       I   ++  R   +  + ++  G +K+   +  +  V    G+        G
Sbjct: 177 YLTGSLMLGINSGIYLFRVEESVLMTDVTGGFVKSLVFSLVVTTVCCSRGYFTHLHRGGG 236

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
             +  +    TT VV S  +V++ D +      
Sbjct: 237 FGAKGVSFSTTTAVVNSCVLVLVCDYVITYLLL 269


>gi|255020159|ref|ZP_05292228.1| hypothetical protein ACA_0896 [Acidithiobacillus caldus ATCC 51756]
 gi|254970301|gb|EET27794.1| hypothetical protein ACA_0896 [Acidithiobacillus caldus ATCC 51756]
          Length = 260

 Score =  224 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 68/264 (25%), Positives = 133/264 (50%), Gaps = 8/264 (3%)

Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167
                 +G+ + + +    + +  L   +   G      +  + +L    RQ+Y  GV  
Sbjct: 4   LEFIPELGRVVRESVPRLGAASRFL---LLGLGRVVHRHFSIQQWL----RQVYGFGVLS 56

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           + ++++ +F TG V+  QG + L +FGA      L+++  LRE+G +LTA++ AGR+GSA
Sbjct: 57  LALMVVAAFFTGMVLGFQGYYALVRFGATSALGTLVALSLLRELGPVLTALLFAGRAGSA 116

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + AEI +MK  E++ A+  M +D +  ++SPR+WA + ++P+L ++ +   I G  ++  
Sbjct: 117 LTAEIATMKATEQLSAMEMMAVDPLAWVVSPRLWAAVFTVPILCVIFDLVGIFGGYLIAV 176

Query: 288 KYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
               +    F+S+  S  +   +I  GL KA      +  +A  +G++    +  +G   
Sbjct: 177 PVLGVDSGTFWSQMQSNVSFRGDILNGLFKALCFGLVVAWIAAWQGYSAKPTAEGVGNAT 236

Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370
           T  VV +   V+ +D +     F+
Sbjct: 237 TRSVVAASLAVLGLDFILTALLFS 260


>gi|254411230|ref|ZP_05025007.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
           7420]
 gi|196181731|gb|EDX76718.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
           7420]
          Length = 261

 Score =  224 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 70/239 (29%), Positives = 118/239 (49%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           L   I   G+        K +  + + QM  VG   + + ++ +   GAV   Q   +  
Sbjct: 16  LLAAILLGGQVIVHLLGGKIYRRNTLEQMAVVGPDSLTIALITATFIGAVFTIQVTREFI 75

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            FGA      ++++   RE+  +LTAV+IAGR GSA  AEIG+M++ E+IDA+  +  D 
Sbjct: 76  NFGATTAIGGVLALALSRELAPVLTAVVIAGRVGSAFAAEIGTMRVTEQIDALYMLKTDP 135

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           +  L+ PR+ A I+ LPLLTIL+    + G  ++    Y+IP +VF     +   + ++F
Sbjct: 136 IDYLVIPRVIACILMLPLLTILSIILGMTGGVLIAVNLYNIPQSVFLDSARNFLGIWDLF 195

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           T +IKA      I ++    G      +  +G+  TT VV ++  + I +   +   F 
Sbjct: 196 TAMIKAAVFGMLIAVIGCSWGLTTSGGAKGVGQSTTTAVVTALLAIFITNFFLSWLMFQ 254


>gi|149378023|ref|ZP_01895747.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Marinobacter algicola
           DG893]
 gi|149357678|gb|EDM46176.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Marinobacter algicola
           DG893]
          Length = 259

 Score =  224 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 67/255 (26%), Positives = 126/255 (49%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           ++  F     S    LG          A   +       L++Q+Y VGV  + ++++   
Sbjct: 3   RLAAFGRLGMSVIASLGRSGRFLVGALAGVPRPSVGFPLLLKQLYSVGVLSLAIIVVSGL 62

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   LS +G+E     ++++  +RE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 63  FIGMVLGLQGYTILSDYGSEAAIGQMIALTLVRELGPVVTALLFAGRAGSALTAEIGLMK 122

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  MG+D +R +I+PR+WA  IS+P+L  + +   I G  +V  ++  +    
Sbjct: 123 ATEQLSSMEMMGVDPLRRVIAPRLWAGFISVPVLAAVFSVVGIWGGMLVGVEWLGVFEGS 182

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+    S+ +   ++  G++K+         +A+ +G+     S  +    T  VV S  
Sbjct: 183 FWGNMQSSVSFTADVLNGVVKSLVFGFVCTWIAVYQGYDCVPTSAGISAATTKTVVYSSL 242

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 243 AVLGLDFVLTAVMFG 257


>gi|46447386|ref|YP_008751.1| hypothetical protein pc1752 [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|46401027|emb|CAF24476.1| conserved hypothetical protein [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 240

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 66/221 (29%), Positives = 120/221 (54%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
           S +     + +  Q++ +GV  +PVV +  F TG V+A Q  FQLS  G    +  +++ 
Sbjct: 3   SLRRPPTWILIRDQLFDIGVMSLPVVAITGFSTGMVLAAQSFFQLSDKGLASATGLMVAK 62

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
             L E+G +LTA M+ GR G+A+ AE+G+M++ E+IDA+RTM ++ +  L++PR  A +I
Sbjct: 63  AMLVELGPVLTAFMVTGRVGAAMCAELGTMRVTEQIDAMRTMSVNPLGYLVAPRFLAGMI 122

Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325
            +PLLT+ +    I G  ++   +Y +P + F           +  +G++KA      I 
Sbjct: 123 MMPLLTVFSAIMGIFGGYLIAVYFYKMPASSFIDPLPLHINTFDFISGMVKAFVFGIIIV 182

Query: 326 IVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
            ++  +G      +  +G+  T  VV   S+++II+ +  +
Sbjct: 183 TISCYKGMKTRGGAAGVGRSTTNSVVICYSVILIINFILTL 223


>gi|152972118|ref|YP_001337264.1| ABC transporter membrane protein [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|206579237|ref|YP_002236394.1| hypothetical protein KPK_0517 [Klebsiella pneumoniae 342]
 gi|238896701|ref|YP_002921446.1| putative ABC transport system permease component [Klebsiella
           pneumoniae NTUH-K2044]
 gi|288933378|ref|YP_003437437.1| hypothetical protein Kvar_0495 [Klebsiella variicola At-22]
 gi|290511571|ref|ZP_06550940.1| ABC transporter, permease component YrbE [Klebsiella sp. 1_1_55]
 gi|329997630|ref|ZP_08302887.1| toluene tolerance protein Ttg2B [Klebsiella sp. MS 92-3]
 gi|150956967|gb|ABR78997.1| putative transport protein (ABC superfamily, membrane) [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|206568295|gb|ACI10071.1| putative membrane protein [Klebsiella pneumoniae 342]
 gi|238549028|dbj|BAH65379.1| putative ABC transport system permease component [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|288888107|gb|ADC56425.1| protein of unknown function DUF140 [Klebsiella variicola At-22]
 gi|289776564|gb|EFD84563.1| ABC transporter, permease component YrbE [Klebsiella sp. 1_1_55]
 gi|328538940|gb|EGF64994.1| toluene tolerance protein Ttg2B [Klebsiella sp. MS 92-3]
          Length = 260

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++I+   
Sbjct: 5   ALAALGHRGIKTTATFGRAGLMLFNAVVGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGL 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLTI+     I G ++V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGALVGVSWKGIDGGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F++   +      ++   LIK+   A  +  +A+  G+     S  + +  T  VV +  
Sbjct: 185 FWTAMQNAVDWRMDLVNCLIKSLVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|198242766|ref|YP_002217283.1| toluene ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|197937282|gb|ACH74615.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
          Length = 260

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 72/255 (28%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++I+   
Sbjct: 5   ALAALGHSGIKTVRTFGRAGLMLFNAIIGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGV 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLTI+     I G S+V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   +      ++   LIK+   A  +  +A+  G+     S  + +  T  VV +  
Sbjct: 185 FWSVMQNAVDWRMDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|294634664|ref|ZP_06713197.1| toluene tolerance ABC efflux transporter, permease [Edwardsiella
           tarda ATCC 23685]
 gi|291091910|gb|EFE24471.1| toluene tolerance ABC efflux transporter, permease [Edwardsiella
           tarda ATCC 23685]
          Length = 260

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 68/255 (26%), Positives = 119/255 (46%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +        +     G              +       L RQ+Y VGV  + ++++   
Sbjct: 5   GLASLGRRGINVCAAFGRAGLMLFSALVGRPEPAKQWPLLRRQLYSVGVQSLLIIMVSGL 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 65  FIGMVLGLQGYLVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +++PR WA +IS+PLLT++     I G S+V   +  I    
Sbjct: 125 ATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLTVIFVAIGIWGGSVVGVDWKGIDAGF 184

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S          ++   LIK+   A  +  +A+  G+     S  + +  T  VV S  
Sbjct: 185 FWSAMQGAVDYRTDLLNCLIKSLVFAITVMWIALFNGYDAIPTSAGISRATTRTVVHSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|160900967|ref|YP_001566549.1| hypothetical protein Daci_5535 [Delftia acidovorans SPH-1]
 gi|160366551|gb|ABX38164.1| protein of unknown function DUF140 [Delftia acidovorans SPH-1]
          Length = 260

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 59/261 (22%), Positives = 127/261 (48%), Gaps = 8/261 (3%)

Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171
             IG  + + +        + G +++  G               +  Q++++G   + ++
Sbjct: 7   ARIGAAVRQQLTQLGMGTRLFGRLLALMGPALGRP-------RLIGDQIHFLGNYSLAII 59

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
            +     G V+  QG + L ++G+      L+++  +RE+G ++TA++ AGR+G+A+ AE
Sbjct: 60  GVSGLFVGFVLGLQGYYTLQRYGSAEALGLLVALSLVRELGPVVTALLFAGRAGTALTAE 119

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           IG MK  E++ A+  M +D VR +++PR  A +I++PLL  + +   +IG  +V      
Sbjct: 120 IGLMKAGEQLSAMEMMAVDPVRRILAPRFVAGLIAMPLLAAVFSAVGVIGGWLVGVVMIG 179

Query: 292 IPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
           +    F+ +  +      ++  G++K+     A+  +A+ +G+A       + +  T  V
Sbjct: 180 VDGGAFWGQMQNGVDWWYDLGNGVLKSLVFGVAVTFIALLQGYAAKPTPEGVSRATTRTV 239

Query: 351 VQSISIVIIIDSLFAIFYFAI 371
           V +   V+ +D L     F++
Sbjct: 240 VMASLAVLGLDFLLTATMFSL 260


>gi|258645550|ref|ZP_05733019.1| toluene tolerance ABC efflux transporter, permease [Dialister
           invisus DSM 15470]
 gi|260402906|gb|EEW96453.1| toluene tolerance ABC efflux transporter, permease [Dialister
           invisus DSM 15470]
          Length = 253

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 69/249 (27%), Positives = 120/249 (48%), Gaps = 2/249 (0%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
             + +    H LG VI      C      +      I+Q   +GV   P+V L    TG 
Sbjct: 7   LGSKTIGLFHQLGAVILLLNSSCKELNHLR--FRETIKQCLDLGVLSFPIVALTLLFTGM 64

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V++ Q A +L+++GA      +++I   RE+G +L  V++AGR G+AI AEIG+M++ E+
Sbjct: 65  VLSVQIAGELTKYGAGFTVGAIVAIGMGRELGPVLCGVVLAGRVGAAITAEIGTMRVTEQ 124

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+R M +  V  L+ PR+ + +  LP+LT+      + G  IV    + +   VF   
Sbjct: 125 IDALRCMAVSPVGYLVLPRLLSCMAMLPILTVFGVSIGVFGGMIVASLTHGVSSYVFIHS 184

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                  ++++ G++K+      + +V    G      +  +G+  T  VV SI ++   
Sbjct: 185 IEVFCIPSDLYIGVMKSVVFGMIVALVGCDRGMTCEAGAEGVGRATTQSVVYSIIMIFAA 244

Query: 361 DSLFAIFYF 369
           + L +   F
Sbjct: 245 NYLLSSILF 253


>gi|94969917|ref|YP_591965.1| hypothetical protein Acid345_2890 [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551967|gb|ABF41891.1| protein of unknown function DUF140 [Candidatus Koribacter
           versatilis Ellin345]
          Length = 258

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 63/233 (27%), Positives = 117/233 (50%)

Query: 137 SNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE 196
              G    + +    +L   ++Q   +GV  +P+VIL  F TGA +A   +  L +FG+ 
Sbjct: 22  QLAGRSLTNLFSQPRYLSDTLQQADLIGVGSLPIVILAGFFTGAALALNTSATLQKFGSI 81

Query: 197 IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILI 256
             +  L+S   +RE+G +LT +M+AGR+ S + +E+GSMK+ E+IDA+R +G D  + L+
Sbjct: 82  TLTGQLVSYSMVRELGPVLTGLMVAGRNSSGMASELGSMKVTEQIDAMRALGTDPSKKLV 141

Query: 257 SPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316
           +PR+ + ++ L  L+I+++   + G  I+ W    +    +++  +      ++  GL+K
Sbjct: 142 TPRVISTVVMLFFLSIISDLLGMAGGFIISWTLLGLDANQYWTTAYQALVFQDVLMGLVK 201

Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
                  I  V    G      +  +G+  T  VV +  ++I  D     F  
Sbjct: 202 PVVFGFFIASVGCYYGMNATGGTQGVGRATTQAVVTASVLIIASDLFITRFLM 254


>gi|225848307|ref|YP_002728470.1| toluene tolerance protein Ttg2B [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225643396|gb|ACN98446.1| putative toluene tolerance protein Ttg2B [Sulfurihydrogenibium
           azorense Az-Fu1]
          Length = 247

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 68/235 (28%), Positives = 119/235 (50%)

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G +     +   +++K    L  +++ M  +GV+   ++IL  F TG V+  +      +
Sbjct: 11  GEITLFFIKTLIATFKRFPKLKHILKYMEDIGVNAALLIILTGFFTGGVLVVETYPTFHK 70

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
           F AE     L+S+   RE+  +L A+++  RSGSAI A IG+M+I E+IDA+  M ++  
Sbjct: 71  FNAEYLMGALVSLSLARELSPVLVALLVTARSGSAIAANIGTMRITEQIDALEVMAVNPY 130

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
             L+SPR+ A ++ +P LT+L+  S +IG        Y I   +++ +      L +IF 
Sbjct: 131 SYLVSPRLIAAVVMVPALTVLSYVSGVIGGYFTSVYIYGINEYMYWEKLKDFTELKDIFG 190

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           GL KA      + IV    G+     +  +G+  TT VV +  +++I+D      
Sbjct: 191 GLYKAAVFGAVLTIVTSYFGYITKGGAEGVGRSTTTAVVVASVLILILDYFLTAL 245


>gi|170695754|ref|ZP_02886896.1| protein of unknown function DUF140 [Burkholderia graminis C4D1M]
 gi|170139359|gb|EDT07545.1| protein of unknown function DUF140 [Burkholderia graminis C4D1M]
          Length = 259

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 60/265 (22%), Positives = 130/265 (49%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
              L   +G+ ++  +  +         ++                   + +Q+++VG  
Sbjct: 2   IGTLISSVGRVVLDGLGTAGYATRFFLRLLVEFFPLLRRP-------RLVTKQIHFVGNY 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+
Sbjct: 55  SLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGT 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           ++ AEIG MK  E++ A+  M +D V+++++PR+WA IIS+P+L  + +   I G  +V 
Sbjct: 115 SLTAEIGLMKAGEQLTAMEMMAVDPVKVVVAPRLWAGIISMPILAAIFSAVGIAGGYVVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                +    F+S+      +  ++  G++K+     A+  VA+ +G+        + + 
Sbjct: 175 VLLIGVDAGAFWSQMQGGVDVWRDVGAGVVKSVVFGLAVTFVALFQGYEARPTPEGVSRA 234

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV +   V+ +D L     F+
Sbjct: 235 TTKTVVYASLAVLGLDFLLTALMFS 259


>gi|290968738|ref|ZP_06560276.1| putative membrane protein [Megasphaera genomosp. type_1 str. 28L]
 gi|290781391|gb|EFD93981.1| putative membrane protein [Megasphaera genomosp. type_1 str. 28L]
          Length = 253

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 72/248 (29%), Positives = 115/248 (46%), Gaps = 2/248 (0%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
            N   S    +G      G         K  L   I QM  +GV  +P+V L     G V
Sbjct: 8   GNRVLSLFSQVGAFTLLWGRTIRQLPNIKWHLT--IYQMAKLGVDSLPIVSLTLLFAGMV 65

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +  Q    L ++GA+      MS+   RE+G +LT V++AGR G+A+ AEIG+MK+ E+I
Sbjct: 66  MTLQIVDILLRYGAQSTLGGAMSVSMGRELGPILTGVVMAGRVGAAMTAEIGTMKVTEQI 125

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+R + ++ +  L+ PR  A ++ +PLL          G   V      +    + +  
Sbjct: 126 DALRCLAVNPIAYLVVPRFVACVLMVPLLAFYGYVIGTAGGYAVAVWGAGLAHFTYVNSI 185

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                + +I  GLIKA F    I ++A  EGF     +  +G+  T  VV SI  + I +
Sbjct: 186 AVLTAVGDIVYGLIKAMFFGGIIAVIACYEGFHAESGAEGVGRATTKSVVTSIVFIFICN 245

Query: 362 SLFAIFYF 369
            + ++  +
Sbjct: 246 YILSVILY 253


>gi|258543490|ref|YP_003188923.1| ABC transporter permease [Acetobacter pasteurianus IFO 3283-01]
 gi|256634568|dbj|BAI00544.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-01]
 gi|256637626|dbj|BAI03595.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-03]
 gi|256640678|dbj|BAI06640.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-07]
 gi|256643735|dbj|BAI09690.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-22]
 gi|256646790|dbj|BAI12738.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-26]
 gi|256649843|dbj|BAI15784.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-32]
 gi|256652831|dbj|BAI18765.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256655887|dbj|BAI21814.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-12]
          Length = 385

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 81/375 (21%), Positives = 158/375 (42%), Gaps = 16/375 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           + +G+      G W        A              +  +D + +   D+     +   
Sbjct: 24  TADGVC-LNVEGAWTVQAGG--ATPFPQDKLPVEPGHTLHIDTTGLKGWDSAFVAFLWDV 80

Query: 62  ME---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            +   K       Q +    ++L +L+         +   + +    + + +   +G   
Sbjct: 81  KQAASKAQLHFDEQNLPAPAQRLLALL--------PDAPAEPAQPPRNTEGIFARVGDAT 132

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +K + ++ + + +         +        +  +  L+  ++  G   + +V +++F+ 
Sbjct: 133 LKGLTETGTVSELALETAKGATQAVRGKSAMR--MKDLLLDIWNAGPDALLIVGIVNFLV 190

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA++A  G  +L +F AEI+  DL+ I   REI  ++TA+++AGR+G A  A I +M  N
Sbjct: 191 GAILAFVGLVELRKFAAEIYVTDLVGIACAREISAIMTAIIMAGRTGGAYAARISTMLGN 250

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA++  G+     ++ P I +L + +PLL +     AI G   V     D+    ++
Sbjct: 251 EEIDALQVFGIPISSYILLPSIVSLALMMPLLYLYGTIVAIFGGFAVSMSMMDVSPIGYW 310

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
                   L     G IK+ F A  I + A + G   G  +  +G   T  VV  I  +I
Sbjct: 311 ISTFDGVELKEFIFGFIKSFFFASFIALAACRVGLKAGRSAADVGVAATRAVVIGIVGII 370

Query: 359 IIDSLFAIFYFAIGI 373
            +D++FA+   A+GI
Sbjct: 371 AMDAIFAVIANALGI 385


>gi|56751145|ref|YP_171846.1| putative ABC transporter permease [Synechococcus elongatus PCC
           6301]
 gi|81299189|ref|YP_399397.1| hypothetical protein Synpcc7942_0378 [Synechococcus elongatus PCC
           7942]
 gi|56686104|dbj|BAD79326.1| putative ABC transporter permease protein [Synechococcus elongatus
           PCC 6301]
 gi|81168070|gb|ABB56410.1| Protein of unknown function DUF140 [Synechococcus elongatus PCC
           7942]
          Length = 264

 Score =  223 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 116/249 (46%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           +N      + L L +   G+     ++ +    +   QM  VG S + + +L     GAV
Sbjct: 6   LNGLKRWVNRLLLALLLAGQVVLHLFRARIDPYNTREQMANVGPSSLLITLLTGVSVGAV 65

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
              Q A +   FGA      ++++   RE+  +LT V++AGR GSA  AEIG+M++ E+I
Sbjct: 66  FTIQVAREFINFGAGNIVGGILALALFRELAPVLTGVVVAGRIGSAFAAEIGTMQVTEQI 125

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  +  D V  L+ PR  A  + +P+L +      +   S+V    Y IP +VFF   
Sbjct: 126 DALLMLRTDPVDYLVVPRTLACCLMMPILCLGFGLIGVTAGSLVAQSAYGIPVSVFFDGI 185

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            +     ++ + LIKA      +  +    G      +  +G+  T  VV ++ ++ ++D
Sbjct: 186 RNFLEPWDVVSSLIKAVIFGWVVAAIGTNWGLTTTGGARGVGESTTGAVVTALLVIFVLD 245

Query: 362 SLFAIFYFA 370
              +   F+
Sbjct: 246 FFLSQLMFS 254


>gi|238025995|ref|YP_002910226.1| ABC transporter inner membrane subunit [Burkholderia glumae BGR1]
 gi|237875189|gb|ACR27522.1| ABC transporter, inner membrane subunit [Burkholderia glumae BGR1]
          Length = 255

 Score =  223 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 60/262 (22%), Positives = 130/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +     +   ++                   + +Q++++G     
Sbjct: 1   MISAIGRFVLGGLERTGYATRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++GAE     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGAEQSLGLLVALSLVRELGPVVTALLYAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D ++ +I+PR+WA II++PLL+ +     +IG  +V    
Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKTVIAPRMWAGIIAMPLLSAIFCAVGVIGGYVVGVIL 173

Query: 290 YDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+        +++  G++K+     A+  VA+ +G+        + +  T 
Sbjct: 174 IGVDPGAFWSQMQGGVDAWSDVGNGVLKSVVFGFAVTFVALYQGYEAKPTPEGVSRATTR 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVYASLAVLGLDFLLTALMFS 255


>gi|52841078|ref|YP_094877.1| toluene tolerance protein Ttg2B [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|54293817|ref|YP_126232.1| hypothetical protein lpl0873 [Legionella pneumophila str. Lens]
 gi|54296863|ref|YP_123232.1| hypothetical protein lpp0904 [Legionella pneumophila str. Paris]
 gi|52628189|gb|AAU26930.1| toluene tolerance protein Ttg2B [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|53750648|emb|CAH12055.1| hypothetical protein lpp0904 [Legionella pneumophila str. Paris]
 gi|53753649|emb|CAH15107.1| hypothetical protein lpl0873 [Legionella pneumophila str. Lens]
 gi|307609634|emb|CBW99138.1| hypothetical protein LPW_09231 [Legionella pneumophila 130b]
          Length = 260

 Score =  223 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 65/265 (24%), Positives = 126/265 (47%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             +    +G + V+ +    S    L  ++             + + L L  Q+Y++GV 
Sbjct: 1   MLDTIARLGNRGVQALQGIGSSGLFLFSML------FRKPNVLRLWPL-LRYQLYFIGVL 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
              ++++ +   G V+  QG   L +FGA      L+++   RE+G +++A++ AGR+GS
Sbjct: 54  SCLIIVVSALFIGMVVGLQGYNTLQKFGASSQLGQLLALSVARELGPVISALLFAGRAGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++ ++  MG+D +  ++ PR  A  I+LP+L ++ +  AI G   + 
Sbjct: 114 ALTAEIGLMKATEQLSSMDMMGVDPLGRVVYPRFVAGFIALPILALIFSAVAIYGGYFIG 173

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
             +  +    F+S   +      +I +G+IK+   A  +  +++ +GF     +  +   
Sbjct: 174 VYWLGVDAGSFWSNMQAAVNFRIDILSGIIKSLVFAFVVTWISVYQGFECVPTAEGISHA 233

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV S   V+ +D L       
Sbjct: 234 TTKTVVYSSLAVLGLDFLLTAMMIG 258


>gi|119493784|ref|ZP_01624353.1| hypothetical protein L8106_03769 [Lyngbya sp. PCC 8106]
 gi|119452479|gb|EAW33666.1| hypothetical protein L8106_03769 [Lyngbya sp. PCC 8106]
          Length = 259

 Score =  223 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 64/238 (26%), Positives = 115/238 (48%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
               +   G+      + K +  + + QM  VG   + + ++ +   G V   Q + +  
Sbjct: 14  FVAALFLGGQVIVHLLQGKIYRRNTLEQMAAVGPESLLIALITAGFVGMVFTIQVSREFI 73

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
             GA   +  ++++   RE+  +LTAV+I GR GSA  AEIG+M++ E+IDA+  +  D 
Sbjct: 74  TLGAGNLAGGVLALSLARELSPVLTAVIITGRVGSAFAAEIGTMQVTEQIDALYVLKTDP 133

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A  + LPLL I+   + + G  ++    Y+IP  +F     +  TL ++ 
Sbjct: 134 VDYLVIPRVIACCLMLPLLNIICLMTGLAGGLLISSSLYNIPPNMFLESVQNFLTLWDLV 193

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           +G IKA      I +++   G      +  +G+  TT VV  +  + I+D   +   F
Sbjct: 194 SGEIKALIFGGTIAVISTNWGLTTTGGAKGVGQSTTTAVVTCLLSIFILDFFLSWSMF 251


>gi|302877779|ref|YP_003846343.1| hypothetical protein Galf_0536 [Gallionella capsiferriformans ES-2]
 gi|302580568|gb|ADL54579.1| protein of unknown function DUF140 [Gallionella capsiferriformans
           ES-2]
          Length = 262

 Score =  223 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 66/265 (24%), Positives = 126/265 (47%), Gaps = 8/265 (3%)

Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
           +       IG +IV  +      A    L +  +G               +I++++  GV
Sbjct: 2   AVVKTISAIGHRIVDTVWRIGVAARFFFLTLLYSGNCLRR-------FHLVIKELFSTGV 54

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             + ++I+     G V+  QG   L ++G+E     ++++  +RE+G ++ A++ A R+G
Sbjct: 55  MSLIIIIVAGLFVGMVLGLQGYETLKRYGSESALGVMVALGLVRELGPVMAALLFASRAG 114

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           SA+ AEIG MK  E+I A+  M ++ +  +++PR WA +IS+PLL  L +   I G  +V
Sbjct: 115 SAMTAEIGLMKATEQISAMEMMAVNPIARIVAPRFWAGVISMPLLAALFSAVGIFGGYLV 174

Query: 286 IWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
                 +    F+S+  +      +I  G+IK+      + ++A+ EGF     +  +  
Sbjct: 175 GVVQIGVDEGSFWSQMQAAVDFREDIMNGIIKSVVFGTVVTVIALFEGFDAPPTAEGVSG 234

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYF 369
             T  VV S   ++++D +     F
Sbjct: 235 ATTRTVVTSSLAILMLDFVLTAIMF 259


>gi|303230959|ref|ZP_07317702.1| putative membrane protein [Veillonella atypica ACS-049-V-Sch6]
 gi|302514341|gb|EFL56340.1| putative membrane protein [Veillonella atypica ACS-049-V-Sch6]
          Length = 253

 Score =  223 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 69/261 (26%), Positives = 127/261 (48%), Gaps = 9/261 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    IG+ ++  +++  +   ++   I       A           +++QM ++GV  +
Sbjct: 2   NWLEVIGRNVIAGLSNVGTAMLLVWQTIKQLKMLNA---------WHVLQQMAHLGVDSL 52

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
           P++ L     G V+  Q    L  +GA+     LM++   RE+G +L  V++AGR G+AI
Sbjct: 53  PIISLTLLFAGGVMTLQITDVLITYGAQGTVGGLMAVAMGRELGPILVGVVLAGRVGAAI 112

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG+MK+ E+IDA+R M ++ +  L+ PR+ A +I +P+L        I G   V   
Sbjct: 113 TAEIGTMKVTEQIDALRVMAVNPIGYLVVPRVVACMIMVPILAFYGVVIGIAGGYFVATA 172

Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
              +  A +       +T+++   GLIK+      I +V   +G    + + ++G   T+
Sbjct: 173 IKGLAPATYLDSIQMFSTISDFTLGLIKSSVFGAVIALVGCYKGMHTKMGAEAVGFSTTS 232

Query: 349 CVVQSISIVIIIDSLFAIFYF 369
            VV SI +V +++   +   F
Sbjct: 233 SVVTSIILVFVLNYFLSTLLF 253


>gi|197119107|ref|YP_002139534.1| transporter membrane protein [Geobacter bemidjiensis Bem]
 gi|197088467|gb|ACH39738.1| transporter membrane protein of unknown function DUF140 [Geobacter
           bemidjiensis Bem]
          Length = 258

 Score =  223 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 68/261 (26%), Positives = 130/261 (49%), Gaps = 9/261 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
                  +GK+++ F         +LG ++   G+      +    + S++ QM  +G  
Sbjct: 1   MTQFLEPLGKRVLYFNQ-------VLGEMVILQGKILYFLREAPRNVQSILTQMAVIGWD 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PV  +++F  G V+A Q   +L ++G +     ++    +RE+G ++T+ ++AGR GS
Sbjct: 54  TLPVASVMAFFVGMVLALQTGVELQKYGGQNIIGAIVGHSMVRELGPVMTSFLVAGRCGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AE+G M + EEIDA++T+ +D VR L  PR  A I+ +P L I ++   IIG +++ 
Sbjct: 114 AMAAELGVMTVYEEIDALKTLDIDPVRYLAMPRFIACIVCVPALVIYSDVIGIIGGALIS 173

Query: 287 WK--YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
                  + +A ++        +  I  GL K+      I +V+   GF+    +  +G+
Sbjct: 174 NLHPQIFVSYATYYDSLTDALKIKEIGIGLTKSVAFGSIIALVSCYVGFSTSGGARGIGQ 233

Query: 345 KVTTCVVQSISIVIIIDSLFA 365
             T  VV S  ++++ D +  
Sbjct: 234 STTRSVVLSFMLILVADYILT 254


>gi|32474659|ref|NP_867653.1| ABC transporter permease [Rhodopirellula baltica SH 1]
 gi|32445198|emb|CAD75200.1| probable permease of ABC transporter [Rhodopirellula baltica SH 1]
          Length = 296

 Score =  223 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 70/253 (27%), Positives = 118/253 (46%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + I+++          +G +   T +     +       +++   Y VGV  +PVV L  
Sbjct: 29  RWIMQWGTAVVGGVTAVGDLAMFTWQMFVWMFTRMPRRDTVLVNFYQVGVLSLPVVALTG 88

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A Q  +Q    G E     +++   +RE+G +L A M+AGR G A+ A +G+M
Sbjct: 89  SFIGMVLAVQSYYQFHTIGLETHLGVVINTSLVRELGPVLAATMLAGRVGGAMAAVLGTM 148

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           ++ E+IDA+ TMG D +  L+ PR  A ++ +P LTI+A+F  I+G          I  A
Sbjct: 149 RVTEQIDALTTMGADPIHYLVVPRFMACLLLIPALTIVADFMGIVGGYFYSVIILGIDRA 208

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            +           ++F G+ K+ F    I I++   GF     +  +GK  T   V S  
Sbjct: 209 AYLHHSREGVVAFDLFNGIFKSIFFGGVIAIISCYRGFNCQPGAEGVGKAATEAFVYSFV 268

Query: 356 IVIIIDSLFAIFY 368
           +++ ID    I  
Sbjct: 269 MILAIDLFLNIVL 281


>gi|302828760|ref|XP_002945947.1| hypothetical protein VOLCADRAFT_72591 [Volvox carteri f.
           nagariensis]
 gi|300268762|gb|EFJ52942.1| hypothetical protein VOLCADRAFT_72591 [Volvox carteri f.
           nagariensis]
          Length = 348

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 116/237 (48%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
             +   G+     +K      + + Q+  VG + + V +L +   G V   Q   + ++ 
Sbjct: 102 ACLVLGGQVVLRIFKGNIHWRNTVEQLRLVGPASLGVSLLTAGFVGMVFTIQFVREFAKL 161

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           G       ++++   RE+  ++TA+++AGR GSA  AE+G+M+++E++D++R +  D V 
Sbjct: 162 GLTRSVGGVLALALSRELTPVVTAIILAGRVGSAFAAELGTMQVSEQMDSLRVLFTDPVD 221

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            L++PR+ A +I+ P+L +L     +  A ++    Y++P  V         T  ++ T 
Sbjct: 222 YLVTPRVLASMIAGPILNVLCFCMGMGAAVLLADLVYNVPANVIVDSARRALTSYDVLTS 281

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           ++K+      +  ++   GF     +  +G+  T+ VV S+  + I D   +  +F 
Sbjct: 282 MVKSWVFGTVVATISCAWGFTTSGGAKGVGESTTSAVVISLVTIFIADFFLSFIFFQ 338


>gi|288942538|ref|YP_003444778.1| hypothetical protein Alvin_2840 [Allochromatium vinosum DSM 180]
 gi|288897910|gb|ADC63746.1| protein of unknown function DUF140 [Allochromatium vinosum DSM 180]
          Length = 259

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 64/265 (24%), Positives = 126/265 (47%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             +    +G+ ++  +        +L  ++   GE              L  Q++ +GV 
Sbjct: 1   MLDPLARLGRGVLDALERLGRGHLLLLAILLGLGEVLRRP-------RLLWEQLFNIGVL 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + +V +     G V+A QG + LSQFGA      +++   +RE+G ++TA+++AGR+GS
Sbjct: 54  SLLIVGVSGLFVGMVLALQGYYVLSQFGAAESLGVMVAASLVRELGPVVTALLVAGRAGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++  +  M +D VR ++ PR    ++S+PLL  + +   ++G   V 
Sbjct: 114 ALTAEIGLMKATEQLSGLEMMAVDPVRRILVPRFVGGVLSMPLLAAIFSAVGVLGGYFVG 173

Query: 287 WKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                +    ++S+  +      ++  G+IK+      +  VA+ +G+     S  + + 
Sbjct: 174 VGLLGVDEGAYWSQMQAKIDFDEDLVNGVIKSLAFGVVVTWVALFQGYDTVPTSEGVSRS 233

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV +  +V+ +D +     F 
Sbjct: 234 TTRAVVHAALVVLGLDFVLTALMFG 258


>gi|260220241|emb|CBA27582.1| UPF0393 membrane protein HI1086 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 260

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 64/261 (24%), Positives = 129/261 (49%), Gaps = 8/261 (3%)

Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171
             +G  +   + D  + A ++G ++++ G         +        Q++++G   + ++
Sbjct: 7   AELGFAVRSKLADWGAGARLMGRLVASLGAVLRRPALLR-------DQIHFMGNYSLAII 59

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
            +     G V+  Q  + L +FGA      L+S+  +RE G +LTA++ AGR+G+++ AE
Sbjct: 60  AVSGVFVGFVMGLQYYYGLQRFGAADSVGMLISLSLVREFGPVLTALLFAGRAGTSLTAE 119

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           IG MK  E++ A+  M +D V  +++PR W  +I++P+L  + +   ++G  IV      
Sbjct: 120 IGLMKAGEQLSAMEMMAVDPVSRILAPRFWGAVIAMPILAAVFSAVGVLGGWIVSVPMIG 179

Query: 292 IPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
           I    F+S+  S   +  ++  G+IK+     A+  +A+ +GF        + +  T  V
Sbjct: 180 IDSGAFWSQMQSGVDVWVDVGNGVIKSVVFGFAVSFIALLQGFEAQPTPEGVARATTRTV 239

Query: 351 VQSISIVIIIDSLFAIFYFAI 371
           V +   V+ +D +     F+I
Sbjct: 240 VVASLTVLALDFVLTAMMFSI 260


>gi|71909013|ref|YP_286600.1| hypothetical protein Daro_3401 [Dechloromonas aromatica RCB]
 gi|71848634|gb|AAZ48130.1| Protein of unknown function DUF140 [Dechloromonas aromatica RCB]
          Length = 263

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 63/261 (24%), Positives = 132/261 (50%), Gaps = 8/261 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           L   +G + V+ I      A     V+ ++G            L   +R++Y+ GV  + 
Sbjct: 7   LVRRLGHETVERIWRLGFAARFFWAVLMHSGSSFRR-------LPLTLREIYFSGVLSLL 59

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++++     G V+  QG   L +FG+      L+++   RE+G +L A+  A R+GS++ 
Sbjct: 60  IIMVSGLFVGLVLGLQGYEILQRFGSTEALGTLVALSLTRELGPVLAAIFFASRAGSSVT 119

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M ++ +  +++PR W  +IS+PLL  + +   ++G  ++   +
Sbjct: 120 AEIGLMKATEQLKAMDMMAVNPIARVVAPRFWGGVISMPLLAAIFSAMGVLGGWLIGVVF 179

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    ++S+  ++     +I+ G++K+     A+ ++A+ EG+     +  + + +T 
Sbjct: 180 IGVDDGAYWSQMQASVDFRYDIWNGVVKSFVFGIAVSLIAVFEGYDSVPTAEGVSRAITR 239

Query: 349 CVVQSISIVIIIDSLFAIFYF 369
            VV S+  V+ +D +   F F
Sbjct: 240 TVVTSVLTVLALDFVLTSFMF 260


>gi|85703132|ref|ZP_01034236.1| ABC transporter, inner membrane subunit [Roseovarius sp. 217]
 gi|85672060|gb|EAQ26917.1| ABC transporter, inner membrane subunit [Roseovarius sp. 217]
          Length = 261

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 60/266 (22%), Positives = 121/266 (45%), Gaps = 7/266 (2%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
           N        IG+ ++  +      A                 + ++ FL +L++    +G
Sbjct: 2   NFILGFLASIGRTVLNGLASMGRIALF---ASDTLSHLARPPFYWREFLHALVQ----IG 54

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
              +PVV + +  TG  +A Q     ++F AE     +++I   RE+G +L  +M+A R 
Sbjct: 55  WLSLPVVGMTALFTGGALALQIYAGGARFNAETVVPSIVAIGLTRELGPVLGGLMVAARV 114

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
            S+I AEIG+MK+ E+IDA+ T+  + ++ L  PR+ A  +++P+L  + +   I+G  +
Sbjct: 115 ASSIAAEIGTMKVTEQIDALTTLSTNPMKYLTLPRVLAATLAVPVLVGVGDVIGIMGGFL 174

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
           V     D   A +           ++ +GLIK       + ++    G   G  +  +G+
Sbjct: 175 VGVGRLDFSAATYLHNTMDFLETWDVVSGLIKGAAFGFIVALMGCYYGMNSGRGAQGVGR 234

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370
              + VV +  +++  + +    +F+
Sbjct: 235 ATKSAVVAASVLILASNYILTEVFFS 260


>gi|34558257|ref|NP_908072.1| ABC transporter permease [Wolinella succinogenes DSM 1740]
 gi|34483976|emb|CAE10972.1| ABC TRANSPORTER, PERMEASE PROTEIN [Wolinella succinogenes]
          Length = 268

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 72/265 (27%), Positives = 121/265 (45%), Gaps = 4/265 (1%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
                  +G+ ++            L   +     +    ++ +     L  QM  +GV 
Sbjct: 6   VTAFFGALGRPVLLLWKSLEKFGEFLMFHLRLIPAYFTPPFRAR----ELFIQMESIGVG 61

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
              V++L S  TG V+A Q      QFGAE F    + +   RE+G +  A+M+  R+ S
Sbjct: 62  SFWVIVLTSVFTGMVLAIQFYQGFHQFGAENFMSYPIFLAITRELGPVFAALMLTSRAIS 121

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AE+G+M++ E+IDAI T+ +D  R LI PRI A  +SLPLL IL NF   + A  + 
Sbjct: 122 AMAAELGTMRVTEQIDAIDTLAIDSKRYLIVPRILASTLSLPLLVILFNFIGNLSAYFIS 181

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
                +    + S       L+++   L+KA      + +V    G+     +  +G+  
Sbjct: 182 IHVLGVNEESYRSIVRQYLELSDLVISLVKAFVFGYLVSLVGTYIGYNTRGGARGVGRST 241

Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371
           T+ VV S   +   + L + F+ A+
Sbjct: 242 TSAVVFSAVTIFGANYLLSAFFLAM 266


>gi|327540665|gb|EGF27237.1| ABC transporter permease protein [Rhodopirellula baltica WH47]
          Length = 296

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 70/253 (27%), Positives = 118/253 (46%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + I+++          +G +   T +     +       +++   Y VGV  +PVV L  
Sbjct: 29  RWIMQWGTAVVGGVTAVGDLAMFTWQMFVWMFTRMPRRDTVLVNFYQVGVLSLPVVALTG 88

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A Q  +Q    G E     +++   +RE+G +L A M+AGR G A+ A +G+M
Sbjct: 89  SFIGMVLAVQSYYQFHTIGLETHLGVVINTSLVRELGPVLAATMLAGRVGGAMAAVLGTM 148

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           ++ E+IDA+ TMG D +  L+ PR  A ++ +P LTI+A+F  I+G          I  A
Sbjct: 149 RVTEQIDALTTMGADPIHYLVVPRFMACLLLIPALTIVADFMGIVGGYFYSVIILGIDRA 208

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            +           ++F G+ K+ F    I I++   GF     +  +GK  T   V S  
Sbjct: 209 AYLHHSREGVVAFDLFNGIFKSIFFGGVIAIISCYRGFNCQPGAEGVGKAATEAFVYSFV 268

Query: 356 IVIIIDSLFAIFY 368
           +++ ID    I  
Sbjct: 269 MILAIDLFLNIVL 281


>gi|299136991|ref|ZP_07030174.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX8]
 gi|298601506|gb|EFI57661.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX8]
          Length = 259

 Score =  223 bits (569), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 71/255 (27%), Positives = 128/255 (50%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           K+V     + +    +      +G    + +    ++     QM  +GV  +P+V+L  F
Sbjct: 2   KLVSPGAFAKNVVASVQEYSLLSGRAIGNLFTNPRYIADTFTQMDSIGVGSLPIVVLTGF 61

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
            TG V+A Q A  L +FGA   +  L+++  ++E+G +LT +M++GR+ S + +E+GSMK
Sbjct: 62  FTGCVLALQAAVSLKEFGAINMTGKLVALSMVKELGPVLTGLMVSGRNASGMASELGSMK 121

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           + E+IDA+R +G D +R L++PR+ A +  L  LTI+++     G ++V      +    
Sbjct: 122 VTEQIDAMRALGTDPIRKLVTPRLVATVFMLFFLTIISDACGTGGGALVAVVLLRLNGPA 181

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           FF   + +    ++  GL+K  F    I  +    G      +  +GK  T  VV S  +
Sbjct: 182 FFHTAYMSLVGGDVVEGLVKPLFSGFIIATIGCYYGLRTTGGTQGVGKATTQAVVASSVL 241

Query: 357 VIIIDSLFAIFYFAI 371
           +I++D L       I
Sbjct: 242 IILVDFLVTQLMIGI 256


>gi|253700132|ref|YP_003021321.1| hypothetical protein GM21_1507 [Geobacter sp. M21]
 gi|251774982|gb|ACT17563.1| protein of unknown function DUF140 [Geobacter sp. M21]
          Length = 258

 Score =  223 bits (569), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 68/261 (26%), Positives = 130/261 (49%), Gaps = 9/261 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
                  +GK+++ F         +LG ++   G+      +    + S++ QM  +G  
Sbjct: 1   MTQFLEPLGKRVLYFNQ-------VLGEMVILQGKILYFLREAPRNVQSILTQMAVIGWD 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PV  +++F  G V+A Q   +L ++G +     ++    +RE+G ++T+ ++AGR GS
Sbjct: 54  TLPVASVMAFFVGMVLALQTGVELQKYGGQNIIGAIVGHSMVRELGPVMTSFLVAGRCGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AE+G M + EEIDA++T+ +D VR L  PR  A I+ +P L I ++   IIG +++ 
Sbjct: 114 AMAAELGVMTVYEEIDALKTLDIDPVRYLAMPRFIACIVCVPALVIYSDVIGIIGGALIS 173

Query: 287 WK--YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
                  + +A ++        +  I  GL K+      I +V+   GF+    +  +G+
Sbjct: 174 NLHPQIFVSYATYYDSLTDALKIREIGIGLTKSVAFGSIIALVSCYVGFSTSGGARGIGQ 233

Query: 345 KVTTCVVQSISIVIIIDSLFA 365
             T  VV S  ++++ D +  
Sbjct: 234 STTRSVVLSFMLILVADYILT 254


>gi|148360512|ref|YP_001251719.1| toluene tolerance protein Ttg2B [Legionella pneumophila str. Corby]
 gi|296106421|ref|YP_003618121.1| toluene tolerance protein [Legionella pneumophila 2300/99 Alcoy]
 gi|148282285|gb|ABQ56373.1| toluene tolerance protein Ttg2B [Legionella pneumophila str. Corby]
 gi|295648322|gb|ADG24169.1| toluene tolerance protein [Legionella pneumophila 2300/99 Alcoy]
          Length = 260

 Score =  223 bits (569), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 65/265 (24%), Positives = 126/265 (47%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             +    +G + V+ +    S    L  ++             + + L L  Q+Y++GV 
Sbjct: 1   MLDTIARLGNRGVQALQGIGSSGLFLFSML------FRKPNVLRLWPL-LRYQLYFIGVL 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
              ++++ +   G V+  QG   L +FGA      L+++   RE+G +++A++ AGR+GS
Sbjct: 54  SCLIIVVSALFIGMVVGLQGYNTLQKFGASSQLGQLLALSVARELGPVISALLFAGRAGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++ ++  MG+D +  ++ PR  A  I+LP+L ++ +  AI G   + 
Sbjct: 114 ALTAEIGLMKATEQLSSMDMMGVDPLGRVVYPRFAAGFIALPILALIFSAVAIYGGYFIG 173

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
             +  +    F+S   +      +I +G+IK+   A  +  +++ +GF     +  +   
Sbjct: 174 VYWLGVDAGSFWSNMQAAVNFRIDILSGIIKSLVFAFVVTWISVYQGFECVPTAEGISHA 233

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV S   V+ +D L       
Sbjct: 234 TTKTVVYSSLAVLGLDFLLTAMMIG 258


>gi|167838138|ref|ZP_02464997.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           thailandensis MSMB43]
          Length = 255

 Score =  223 bits (568), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 57/262 (21%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +     +   V+                   + +Q++++G     
Sbjct: 1   MISAIGRFVIGGLGRTGYATRMFLRVVLEFFSLLRRP-------RLVTKQIHFLGNYSFV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G +++A++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVSALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D ++ +I+PR+WA +I++PLL  + +   ++G  IV    
Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPLKNVIAPRMWAGVIAMPLLAAIFSAVGVLGGYIVGVLL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+      +  ++  G++K+     A+  +A+ +G+        +    T 
Sbjct: 174 IGVDPGAFWSQMQGGVEVWADVGNGVLKSVVFGFAVTFIALFQGYEAKPTPEGVSHATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVYASLAVLGLDFLLTALMFS 255


>gi|206603562|gb|EDZ40042.1| Putative integral membrane protein [Leptospirillum sp. Group II
           '5-way CG']
          Length = 255

 Score =  223 bits (568), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 68/244 (27%), Positives = 126/244 (51%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                I G ++  T       ++      +   Q+  VG    PVV++ +  TG V+A Q
Sbjct: 12  IGLFSISGDLLLTTVTALTGMFRPAFLWWNFFVQLVKVGADSTPVVLVTALFTGMVLALQ 71

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
                 +F AE     ++S+   RE+G ++T +M++GRSGS++ AE+G+M++ E+IDA+ 
Sbjct: 72  AWIGFQKFNAEGMVGAVVSLSLTRELGPVITGLMVSGRSGSSMAAELGTMRVTEQIDALE 131

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           ++ +  +  L++PR +A +I+LPLLT++A+F  I+G   V      +P  V+        
Sbjct: 132 SLAVSPLVYLVTPRFYAGLIALPLLTVMADFVGIVGGYFVAVNLLGLPSNVYVKGIARYV 191

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            L + ++GL+KA      + I +   G+     +  +G+ VT  VV S   ++++D    
Sbjct: 192 NLHDFYSGLVKACIFGAVLSIFSCYMGYHARGGAAGVGQSVTKAVVSSSMAILVLDYFLT 251

Query: 366 IFYF 369
            + F
Sbjct: 252 AWLF 255


>gi|261855373|ref|YP_003262656.1| hypothetical protein Hneap_0760 [Halothiobacillus neapolitanus c2]
 gi|261835842|gb|ACX95609.1| protein of unknown function DUF140 [Halothiobacillus neapolitanus
           c2]
          Length = 266

 Score =  223 bits (568), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 64/267 (23%), Positives = 127/267 (47%), Gaps = 8/267 (2%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
           N+F N    +G+  +  +  +       G ++                   +++++Y +G
Sbjct: 6   NAFFNGLALLGQGALAAVAHAGQMILFTGQLLWRLLPAWTRP-------RLIVQELYAIG 58

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
           V  + ++++     G V+  QG   LS+F A      ++++  +RE+G ++TA++ AGR+
Sbjct: 59  VLSLVIILISGGFVGLVLGLQGYNILSKFNATESLGVMVALSLVRELGPVVTALLFAGRA 118

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           GSA+ AEI  MK  E++ A+  M +D +R +++PR W  + S+PLL  L +   I G   
Sbjct: 119 GSAVTAEIALMKTTEQLSAMEMMAVDPLRRVVAPRFWGAVFSMPLLAGLFSLVGIAGGYF 178

Query: 285 VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           +      +  A ++ +         ++  G+IK+      +G++A+ EGF     S  + 
Sbjct: 179 IGVVVLGVDPASYWGQIQQQMQPVDDVLNGVIKSLVFGAVVGLIAVFEGFNAEPTSLGIS 238

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  T  VV S   V+ +D +   + F 
Sbjct: 239 RATTRTVVLSSLCVLGLDFILTAWMFG 265


>gi|319791928|ref|YP_004153568.1| hypothetical protein Varpa_1241 [Variovorax paradoxus EPS]
 gi|315594391|gb|ADU35457.1| protein of unknown function DUF140 [Variovorax paradoxus EPS]
          Length = 260

 Score =  223 bits (568), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 54/248 (21%), Positives = 118/248 (47%), Gaps = 1/248 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             S    LG              +       +  Q++++G   + ++ +     G V+  
Sbjct: 13  VRSHLANLGYGAKLFMRLLGPGAQIMRRFSLVRDQIHFLGNYSLAIIGVSGLFVGFVLGL 72

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q  + L ++G+      L+++  +RE+G ++ A++  GR+G+++ AEIG MK +E++ A+
Sbjct: 73  QMYYALQRYGSSEALGLLVTLSLVRELGPVVAALLFTGRAGTSLTAEIGLMKADEQLSAM 132

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D V+ +++PR WA +I++PLL  + +   I+G  +V      +    F+ +    
Sbjct: 133 EMMAVDPVQRILAPRFWAGVITMPLLAAVFSAVGIMGGYVVGVLMLGVDPGAFWGQMQGG 192

Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             +  ++  G+IK+      +  +A+ +G++       + +  T  VV +   V+ +D L
Sbjct: 193 VDVWRDVGNGVIKSIVFGFTVTFIALLQGYSAQPTPEGVSRATTRTVVTASLAVLGLDFL 252

Query: 364 FAIFYFAI 371
                F+I
Sbjct: 253 LTAMMFSI 260


>gi|220933918|ref|YP_002512817.1| protein of unknown function DUF140 [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995228|gb|ACL71830.1| protein of unknown function DUF140 [Thioalkalivibrio sp. HL-EbGR7]
          Length = 260

 Score =  222 bits (567), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 66/261 (25%), Positives = 121/261 (46%), Gaps = 8/261 (3%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170
              +G   +  +         L  V+ + G               +I+++Y VGV  + +
Sbjct: 5   LQKLGHWGLGVLERLGRGHLFLLRVLMSLGTAVTRP-------RLVIKELYSVGVLSLLI 57

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           + +     G V+  QG   L  FGAE     ++++  +RE+G ++TA++ AGR+GSA+ A
Sbjct: 58  IAVSGLFVGMVLGYQGYITLVNFGAEEALGSVVALSLVRELGPVITALLFAGRAGSALSA 117

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           EIG MK  E++  +  M +D V+ +I PR  A  ISLPLL  + +  A++G   +     
Sbjct: 118 EIGLMKTTEQLSGMEMMAVDPVKRVILPRFVAAFISLPLLAAIFSAVAVMGGYFIGVGLL 177

Query: 291 DIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            +    ++S+  +      ++  G+IK+      +  +A+ EG+     S  + +  T  
Sbjct: 178 GVDGGSYWSQMQANVDFYEDVMNGIIKSLVFGFVVAWIAVFEGYDTVPTSEGVSRATTRT 237

Query: 350 VVQSISIVIIIDSLFAIFYFA 370
           VV S   V+ +D +     F 
Sbjct: 238 VVHSALAVLALDFILTGLMFG 258


>gi|221069030|ref|ZP_03545135.1| protein of unknown function DUF140 [Comamonas testosteroni KF-1]
 gi|220714053|gb|EED69421.1| protein of unknown function DUF140 [Comamonas testosteroni KF-1]
          Length = 258

 Score =  222 bits (567), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 128/264 (48%), Gaps = 8/264 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    IG  +   + +    A +L  ++   G               +  Q++++G   +
Sbjct: 2   NFLARIGLAVRCQLVNMGIGARLLWRLLGLMGPALRRP-------RLIGDQIHFLGNYSL 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG + L ++G+      ++++  LRE+G ++TA++ AGR+G+A+
Sbjct: 55  AIIGVSGLFVGFVLGLQGYYILQRYGSAEALGMMVALSLLRELGPVVTALLFAGRAGTAL 114

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG MK  E++ A+  M +D V+ +++PR WA +I++PLL  + +   ++G  +V   
Sbjct: 115 TAEIGLMKAGEQLSAMEMMAVDPVKRILAPRFWAGLITMPLLAAVFSAVGVLGGWLVGVV 174

Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
              +    F+ +         ++  G++K+     A+  VA+ +G+A       + +  T
Sbjct: 175 MIGVDSGAFWGQMQQGVDWWSDLGNGVLKSFVFGLAVTFVALLQGYAAKPTPEGVSRATT 234

Query: 348 TCVVQSISIVIIIDSLFAIFYFAI 371
             VV +   V+ +D L     F+I
Sbjct: 235 RTVVVASLAVLGLDFLLTATMFSI 258


>gi|269137863|ref|YP_003294563.1| putative transport protein [Edwardsiella tarda EIB202]
 gi|267983523|gb|ACY83352.1| putative transport protein [Edwardsiella tarda EIB202]
 gi|304557916|gb|ADM40580.1| hypothetical protein ETAF_0456 [Edwardsiella tarda FL6-60]
          Length = 260

 Score =  222 bits (567), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 69/255 (27%), Positives = 119/255 (46%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +  F           G              +       L RQ+Y VGV  + ++I+   
Sbjct: 5   GLAAFGRRGIRVCAAFGRAGLMLFSALVGRPEPGKQWPLLRRQLYSVGVQSLLIIIVSGL 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 65  FIGMVLGLQGYLVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +++PR WA +IS+PLLT++     I G S+V   +  I    
Sbjct: 125 ATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLTVIFVAVGIWGGSVVGVDWKGIDAGF 184

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S          ++   LIK+   A  +  +A+  G+     S  + +  T  VV +  
Sbjct: 185 FWSAMQGAVDYRTDLLNCLIKSLVFAITVMWIALFNGYDAVPTSAGISRATTRTVVHASL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|264676838|ref|YP_003276744.1| hypothetical protein CtCNB1_0702 [Comamonas testosteroni CNB-2]
 gi|299529658|ref|ZP_07043095.1| hypothetical protein CTS44_02750 [Comamonas testosteroni S44]
 gi|262207350|gb|ACY31448.1| hypothetical conserved protein [Comamonas testosteroni CNB-2]
 gi|298722521|gb|EFI63441.1| hypothetical protein CTS44_02750 [Comamonas testosteroni S44]
          Length = 258

 Score =  222 bits (567), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 128/264 (48%), Gaps = 8/264 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    IG  +   + +    A +L  ++   G               +  Q++++G   +
Sbjct: 2   NFLARIGLAVRCQLVNMGIGARLLWRLLGLMGPALRRP-------RLIGDQIHFLGNYSL 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG + L ++G+      ++++  LRE+G ++TA++ AGR+G+A+
Sbjct: 55  AIIGVSGLFVGFVLGLQGYYILQRYGSAEALGMMVALSLLRELGPVVTALLFAGRAGTAL 114

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG MK  E++ A+  M +D V+ +++PR WA +I++PLL  + +   ++G  +V   
Sbjct: 115 TAEIGLMKAGEQLSAMEMMAVDPVKRILAPRFWAGLITMPLLAAVFSAVGVLGGWLVGVV 174

Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
              +    F+ +         ++  G++K+     A+  VA+ EG+A       + +  T
Sbjct: 175 MIGVDSGAFWGQMQQGVDWWSDLGNGVLKSFVFGLAVTFVALLEGYAAKPTPEGVSRATT 234

Query: 348 TCVVQSISIVIIIDSLFAIFYFAI 371
             VV +   V+ +D L     F+I
Sbjct: 235 RTVVVASLAVLGLDFLLTATMFSI 258


>gi|121998898|ref|YP_001003685.1| hypothetical protein Hhal_2119 [Halorhodospira halophila SL1]
 gi|121590303|gb|ABM62883.1| protein of unknown function DUF140 [Halorhodospira halophila SL1]
          Length = 258

 Score =  222 bits (567), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 65/264 (24%), Positives = 132/264 (50%), Gaps = 8/264 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
              L   +G++ +  +        ++G ++    E              LI Q+Y VGV 
Sbjct: 1   MIGLFQALGQRTLTALRGLGEAVLLMGRILRAAPEVVVRP-------RLLIEQVYAVGVL 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++++ +   G V+  QG + L+ FGA      ++++  +RE+G ++TA++ AGR+GS
Sbjct: 54  SLVIILVSALFVGMVLGLQGYYTLADFGATEAVGTMVALSLVRELGPVVTALLFAGRAGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           ++ AE+G MK  E++ ++  M +D  R +++PR +A ++++PLL  + +   + G  +V 
Sbjct: 114 SLTAEVGLMKATEQLSSMEMMAVDPERRILAPRFFAAVLAVPLLAAVFSAVGVFGGYLVA 173

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                I    F+S   +  T+  +I  G+IK+      +G +A+ +G+     S+ + + 
Sbjct: 174 VGMVGIDSGAFWSNMQNAVTIQDDILNGVIKSVVFGFLVGWIALHKGYMAEPTSSGVSRA 233

Query: 346 VTTCVVQSISIVIIIDSLFAIFYF 369
            T  VV +   V+ +D L     F
Sbjct: 234 TTLGVVHASLAVLGLDFLLTALMF 257


>gi|187930306|ref|YP_001900793.1| hypothetical protein Rpic_3239 [Ralstonia pickettii 12J]
 gi|187727196|gb|ACD28361.1| protein of unknown function DUF140 [Ralstonia pickettii 12J]
          Length = 255

 Score =  222 bits (566), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 62/262 (23%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  I+     A  L  +I  +G+              +I Q+ ++G     
Sbjct: 1   MISTIGRFVLVLISRFGYAARTLISLIGASGDVLRRP-------RLVIEQLRFIGNDSFI 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG   L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYNTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D +  +++PR WA  I++PLL  + +   I+G   V    
Sbjct: 114 AEIGLMKAGEQLIAMEMMAVDPLARVLAPRFWAGFIAMPLLAAIFSAVGILGGYFVGVGL 173

Query: 290 YDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+  +    + ++  G+IK+     A+  +A+ +G+        + +  T 
Sbjct: 174 IGVDPGAFWSQMQAGVDVMDDVLNGVIKSVVFGVAVTFIALYQGYEAKATPEGVSRATTR 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D +     F+
Sbjct: 234 TVVIASLTVLALDFVLTALMFS 255


>gi|309782892|ref|ZP_07677612.1| toluene tolerance ABC transporter, permease protein [Ralstonia sp.
           5_7_47FAA]
 gi|308918316|gb|EFP63993.1| toluene tolerance ABC transporter, permease protein [Ralstonia sp.
           5_7_47FAA]
          Length = 255

 Score =  222 bits (566), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 62/262 (23%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  I+     A  L  +I  +G+              +I Q+ ++G     
Sbjct: 1   MISTIGRFVLVLISRFGYAARTLISLIGASGDVLRRP-------RLVIEQLRFIGNDSFI 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG   L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYNTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D +  +++PR WA  I++PLL  + +   I+G   V    
Sbjct: 114 AEIGLMKAGEQLIAMEMMAVDPLARVLAPRFWAGFIAMPLLAAIFSAVGILGGYFVGVGL 173

Query: 290 YDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+  +    + ++  G+IK+     A+  +A+ +G+        + +  T 
Sbjct: 174 IGVDPGAFWSQMQAGVDVMDDVLNGVIKSFVFGVAVTFIALYQGYEAKATPEGVSRATTR 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D +     F+
Sbjct: 234 TVVIASLTVLALDFVLTALMFS 255


>gi|302755016|ref|XP_002960932.1| ATP-binding cassette transporter, subfamily I, member 10, SmABCI10
           [Selaginella moellendorffii]
 gi|300171871|gb|EFJ38471.1| ATP-binding cassette transporter, subfamily I, member 10, SmABCI10
           [Selaginella moellendorffii]
          Length = 342

 Score =  222 bits (566), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 115/237 (48%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
             +   G+    + + +  + + ++Q+  VG   + V +L +   G V   Q   + ++ 
Sbjct: 95  ATLVIGGQVILRTLQGRIHVRNTVQQLEAVGPGSLGVNLLTASFVGMVFTIQFVREFAKL 154

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           G       ++++   RE+  ++TAV++AGR GSA  AE+G+M+++E+ D +R +G D V 
Sbjct: 155 GLTRSVGGVLALALARELSPVVTAVILAGRVGSAFAAELGTMQVSEQTDTLRVLGTDPVD 214

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            LI+PR+ A  +++P LT++     +  + ++    Y +   +            +I + 
Sbjct: 215 YLITPRVLACCLAMPFLTLMCFSVGMAASVLLADSVYRVSANIILDSAARALQPWDIVST 274

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +IK+      I IV+   G      +  +G+  T+ VV S+  + I D + +  +F 
Sbjct: 275 MIKSFVFGGIISIVSCAWGVTTLGGAKGVGESTTSAVVISLVCIFIADFILSWCFFQ 331


>gi|134096234|ref|YP_001101309.1| ABC transporter membrane protein [Herminiimonas arsenicoxydans]
 gi|133740137|emb|CAL63188.1| ABC transporter, permease protein [Herminiimonas arsenicoxydans]
          Length = 259

 Score =  222 bits (566), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 63/265 (23%), Positives = 133/265 (50%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
              +   IG+ + +F+ +      I   +I  +G               +I Q++++G  
Sbjct: 2   IAAVLTAIGRGVREFVTNLGFATRIFFKIIGVSGGLLRRPQ-------LVISQIHFIGNY 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++ +     G V+  QG + L+++G+E     L+++   RE+G ++TA++ AGR+G+
Sbjct: 55  SLVLIAVSGLFVGFVLGLQGYYTLNKYGSEQALGLLVALSLTRELGPVVTALLFAGRAGT 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           ++ AEIG MK  E++ A+  M ++ ++ +++PR WA ++++P+L  + +   IIG  IV 
Sbjct: 115 SLTAEIGLMKAGEQLSAMEMMAVNPLQRVLAPRFWAGVVAMPVLAAIFSAIGIIGGYIVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
            K   +    F+S+      +  ++  G+IK+     A+  VA+ +G+        + + 
Sbjct: 175 VKMIGVDEGAFWSQMQGGVDVWDDVLNGVIKSVVFGFAVTFVALYQGYQAQPTPEGVARA 234

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV +   V+ +D L     F+
Sbjct: 235 TTRTVVIASLSVLWLDFLLTALMFS 259


>gi|196232812|ref|ZP_03131662.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428]
 gi|196223011|gb|EDY17531.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428]
          Length = 245

 Score =  222 bits (566), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 76/228 (33%), Positives = 127/228 (55%), Gaps = 1/228 (0%)

Query: 143 CASSYKFKGF-LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSID 201
             + ++ + F +  +  QM  +GV  +P+  L SF  G  +A Q A QL + GA  F  D
Sbjct: 16  LLAPWRGQFFKIGEVFHQMVLIGVRALPMASLTSFSIGLTLAMQAAGQLRKMGASQFVPD 75

Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261
           L+ +  LRE+G LL AV++ GRSGSA+ AE+G+M+++EEI+A+  M ++ +R LI PR  
Sbjct: 76  LVILSLLRELGPLLVAVVVIGRSGSAVTAELGTMRVSEEIEALEVMAINPIRFLIVPRFL 135

Query: 262 ALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMA 321
           A++I LP+LTI  ++  ++G   +     D   A +       A   ++++GLIK+   A
Sbjct: 136 AMMIMLPVLTIFGSYVGMVGGWSICHFALDYSTASYILHSFERARPWDLYSGLIKSVVFA 195

Query: 322 CAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
             I  +A   G  V   +  +G+  T  VV S+ I++I ++     +F
Sbjct: 196 WIIITIACHMGLRVEGGAEGVGQATTGSVVWSLLIMLIANATLTALFF 243


>gi|239814162|ref|YP_002943072.1| hypothetical protein Vapar_1155 [Variovorax paradoxus S110]
 gi|239800739|gb|ACS17806.1| protein of unknown function DUF140 [Variovorax paradoxus S110]
          Length = 260

 Score =  222 bits (566), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 55/261 (21%), Positives = 122/261 (46%), Gaps = 8/261 (3%)

Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171
             IG  +   + D    A +   ++    +        +        Q++++G   + ++
Sbjct: 7   ADIGFAVRSKLADLGYGAKLFLRLLVQGAQSLQRFGLVR-------DQIHFLGNYSLAII 59

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
            +     G V+  Q  + L ++G+      L+++  +RE+G ++ A++  GR+G+++ AE
Sbjct: 60  AVSGLFVGFVLGLQMYYALQRYGSSEALGLLVALSLVRELGPVVAALLFTGRAGTSLTAE 119

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           IG MK  E++ A+  M +D V+ +++PR WA +I++PLL  + +   I+G  +V      
Sbjct: 120 IGLMKAGEQLSAMEMMAVDPVQRILAPRFWAGVITMPLLAAVFSAVGIMGGYVVGVLMLG 179

Query: 292 IPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
           +    F+ +      +  ++  G+IK+      +  +A+ +G+        + +  T  V
Sbjct: 180 VDPGAFWGQMQGGVDVWRDVGNGVIKSIVFGFTVTFIALLQGYEAQPTPEGVSRATTRTV 239

Query: 351 VQSISIVIIIDSLFAIFYFAI 371
           V +   V+ +D L     F+I
Sbjct: 240 VMASLSVLGLDFLLTAMMFSI 260


>gi|91215888|ref|ZP_01252857.1| ABC transporter permease protein [Psychroflexus torquis ATCC
           700755]
 gi|91185865|gb|EAS72239.1| ABC transporter permease protein [Psychroflexus torquis ATCC
           700755]
          Length = 262

 Score =  222 bits (566), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 129/255 (50%), Gaps = 10/255 (3%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           +F  +     +     I    E   S +++K     LIRQ + +G     +V +  F+ G
Sbjct: 15  RFFEEIGDMTYF---AIRFFKEVVTSPFEWK----ELIRQCFQMGNRSFLLVGVTGFILG 67

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V   Q    L +FGA  +   ++SI  +REIG ++ A++ AGR GS+I AE+GSMK+ E
Sbjct: 68  LVFTLQSRPTLLEFGAVSWMPSMVSISIVREIGPVIIALICAGRIGSSIGAELGSMKVTE 127

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +IDA+   G +  + L+  RI A  + LPLL I+ +  A+ G++IV     ++ + ++F+
Sbjct: 128 QIDAMEVSGTNPFKYLVVTRILATTLMLPLLIIMGDAVALFGSAIVENLMGEVSYLLYFN 187

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           +       ++I    IK+ F   AIG+V   +G+     +  +G+     VV +  ++ +
Sbjct: 188 KVFDALKFSDIIPATIKSFFFGFAIGLVGCYKGYNCSKGTVGVGEASNAAVVYTSMLLFV 247

Query: 360 IDSL---FAIFYFAI 371
           ID +       +F I
Sbjct: 248 IDFIAVFLTDIFFYI 262


>gi|86158287|ref|YP_465072.1| ABC amino acid transporter, inner membrane subunit
           [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774798|gb|ABC81635.1| ABC amino acid transporter, inner membrane subunit
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 251

 Score =  222 bits (566), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 65/247 (26%), Positives = 115/247 (46%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
            ++         G +I   GE  A +++       ++ QM ++G     +V +     G 
Sbjct: 1   MLSRLRDAFEDFGRMILFAGEIVAWAFRPPFRPDQILAQMAFIGAGSAFIVGVTGTFAGM 60

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V   Q  + L QF AE ++    +    RE+  + TA+M+ GR+GSAI  E+G+M++ E+
Sbjct: 61  VFGLQMNYALRQFAAEGYTGGSTAFALARELSPVFTALMVTGRAGSAITTELGTMRVTEQ 120

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+ TM +  ++ L+ PR+ A I+  P+LT+L N     GA ++      IP   F   
Sbjct: 121 IDAMETMAVSPIQYLVVPRVLASILMFPVLTMLFNALGYGGAYVMGVFVSGIPEGPFIQH 180

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                   +IF GL KA      + ++    G++    +  +G+  T  VV S   +++ 
Sbjct: 181 TREFLGPDDIFHGLGKAVLFGYIVAVITTWRGYSASGGARGVGEGTTRAVVASSVAILVA 240

Query: 361 DSLFAIF 367
           D    + 
Sbjct: 241 DYAGTVL 247


>gi|291279509|ref|YP_003496344.1| ABC transporter permease [Deferribacter desulfuricans SSM1]
 gi|290754211|dbj|BAI80588.1| ABC transporter, permease [Deferribacter desulfuricans SSM1]
          Length = 256

 Score =  222 bits (566), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 70/245 (28%), Positives = 128/245 (52%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +  +  G +     +F   ++     +  L +QM ++GV+ + V+IL    TG V A 
Sbjct: 12  ILNFIYGSGRIFLFFIDFFRWAFIPPYRVRLLFKQMEFIGVNSLSVIILTGTFTGMVFAF 71

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      +FGAE     ++ +   RE+G +L+++M+A R+GSAI AEIG+M++ E+IDA+
Sbjct: 72  QSYIGFHRFGAEYMVGTVVGLGMARELGPVLSSIMVAARAGSAIAAEIGTMRVTEQIDAL 131

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             + ++ V+ L+ PR+ A +I +P+L I+A F  ++G   V  +   I   ++    +  
Sbjct: 132 YALAVEPVQYLVVPRMLAGVIVMPILNIIAVFCGVVGGYFVGVEILGINKTLYLEYMYRY 191

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               +I+ G+IKA      + +V   +GF     +  +GK  T  VV S  ++++ D + 
Sbjct: 192 VDFDDIYNGIIKATVFGLILTLVGCYKGFYTSGGAEGVGKSTTESVVLSSVLILVFDYIL 251

Query: 365 AIFYF 369
             F F
Sbjct: 252 TAFMF 256


>gi|302767312|ref|XP_002967076.1| hypothetical protein SELMODRAFT_169002 [Selaginella moellendorffii]
 gi|300165067|gb|EFJ31675.1| hypothetical protein SELMODRAFT_169002 [Selaginella moellendorffii]
          Length = 342

 Score =  222 bits (566), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 115/237 (48%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
             +   G+    + + +  + + ++Q+  VG   + V +L +   G V   Q   + ++ 
Sbjct: 95  ATLVIGGQVILRTLQGRIHVRNTVQQLEAVGPGSLGVNLLTASFVGMVFTIQFVREFAKL 154

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           G       ++++   RE+  ++TAV++AGR GSA  AE+G+M+++E+ D +R +G D V 
Sbjct: 155 GLTRSVGGVLALALARELSPVVTAVILAGRVGSAFAAELGTMQVSEQTDTLRVLGTDPVD 214

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            LI+PR+ A  +++P LT++     +  + ++    Y +   +            +I + 
Sbjct: 215 YLITPRVLACCLAMPFLTLMCFSVGMAASVLLADSVYRVSANIILDSAARALQPWDIVST 274

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +IK+      I IV+   G      +  +G+  T+ VV S+  + I D + +  +F 
Sbjct: 275 MIKSFVFGGIISIVSCAWGVTTLGGAKGVGESTTSAVVISLVCIFIADFILSWCFFQ 331


>gi|312888063|ref|ZP_07747647.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM
           18603]
 gi|311299544|gb|EFQ76629.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM
           18603]
          Length = 256

 Score =  222 bits (566), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 130/255 (50%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +  ++D+       G +   TG F +   K +  +  L+ Q Y +G    P+V L  F+ 
Sbjct: 1   MSLLSDTNDFLEQTGKISRFTGHFFSRGIKPRFEIKELLAQCYLIGYKSFPLVGLTGFIM 60

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G V+  Q    L  +G +     ++ I  +REIG ++TA++ AG+ GS+I AE+GSMK+ 
Sbjct: 61  GLVLTMQLRPSLVVYGVQSELPVMVGIAIVREIGPVITALIFAGKIGSSIGAELGSMKVT 120

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           E+IDA+   G +  + L++ R+ A  + LP+LT+L +  ++ GA I +          FF
Sbjct: 121 EQIDAMDVSGTNPFKYLVATRVVATTLMLPVLTLLGDAISLFGAYIGVNINAVTSVRFFF 180

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           ++   + T ++I   +IK  F   A+GI+   +GF     +  +G    + VV S  ++ 
Sbjct: 181 TQVFQSLTYSDIVPAIIKTLFFGFAVGIIGCYKGFNSTKGTQGVGNSANSAVVLSSVVIF 240

Query: 359 IIDSLFAIFYFAIGI 373
           +ID L       +G+
Sbjct: 241 VIDLLTVQLTNLLGL 255


>gi|298490672|ref|YP_003720849.1| hypothetical protein Aazo_1524 ['Nostoc azollae' 0708]
 gi|298232590|gb|ADI63726.1| protein of unknown function DUF140 ['Nostoc azollae' 0708]
          Length = 261

 Score =  222 bits (565), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 62/236 (26%), Positives = 110/236 (46%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
            +   G+      + K +   ++      G + +P V+L+S   G +   Q A +L +FG
Sbjct: 22  TVLLFGQISLHILQGKTYYGKVLEHTVTAGPASLPPVLLVSGFAGMIFTIQTARELVRFG 81

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
           A        ++   RE+  +LTA +IAG+ GSA  AEIG+M++ E+IDA+  +  D +  
Sbjct: 82  AVENVGGAFALAFCRELAPILTASIIAGQVGSAFAAEIGAMRVTEQIDALYMLKTDPIDY 141

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L+ PR+ A  + +PL+ ILA    I G +     +Y +    F        T +++F  L
Sbjct: 142 LVLPRVIACCLMMPLMMILAVIMGITGGAFAASYFYQVQPETFLESVRDFLTPSDVFIIL 201

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +K       + +     G      +  +G+  TT VV +   + I+D + A+  F 
Sbjct: 202 LKGLIFGLIVAVNGCSWGLTTKGGAKEVGESATTAVVTTWVAIFIMDFILALILFE 257


>gi|124268284|ref|YP_001022288.1| hypothetical protein Mpe_A3100 [Methylibium petroleiphilum PM1]
 gi|124261059|gb|ABM96053.1| putative membrane protein [Methylibium petroleiphilum PM1]
          Length = 260

 Score =  222 bits (565), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 58/260 (22%), Positives = 126/260 (48%), Gaps = 8/260 (3%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172
            +G  +   +    + A + G ++++ G               ++ Q++++G   + ++ 
Sbjct: 8   DVGYAVRAQLTGLGAAARLFGRMLASFGPALRRG-------RLVVDQVHFLGNHSLAIIT 60

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
           +     G V+  QG + L ++G+      L+++  +RE+G ++TA++ AGR+G+++ AEI
Sbjct: 61  VSGLFVGFVLGLQGYYTLQRYGSSEALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEI 120

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           G MK  E++ A+  M +D V+ +++PR W  + ++PLL  + +   I+G   V      I
Sbjct: 121 GLMKAGEQLTAMEMMAVDPVQRVLAPRFWGGVFAMPLLAAVFSAVGILGGWAVGVLLIGI 180

Query: 293 PFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
               F+S+         ++  G++K+      +  VA+ EG+        + +  T  VV
Sbjct: 181 DAGGFWSQMQGGVDVFKDVGNGIVKSMVFGVTVTFVALWEGYTCQPTPEGVSRATTRTVV 240

Query: 352 QSISIVIIIDSLFAIFYFAI 371
            +   V+ +D +     F+I
Sbjct: 241 VASLAVLGLDFVLTAMMFSI 260


>gi|241664474|ref|YP_002982834.1| hypothetical protein Rpic12D_2892 [Ralstonia pickettii 12D]
 gi|240866501|gb|ACS64162.1| protein of unknown function DUF140 [Ralstonia pickettii 12D]
          Length = 255

 Score =  222 bits (565), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 61/262 (23%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  I+     A  L  +I  +G+              ++ Q+ ++G     
Sbjct: 1   MISTIGRFVLVLISRFGYAARTLISLIGASGDVLRRP-------RLVLEQLRFIGNDSFI 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG   L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYNTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D +  +++PR WA  I++PLL  + +   I+G   V    
Sbjct: 114 AEIGLMKAGEQLIAMEMMAVDPLARVLAPRFWAGFIAMPLLAAIFSAVGILGGYFVGVGL 173

Query: 290 YDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+  +    + ++  G+IK+     A+  +A+ +G+        + +  T 
Sbjct: 174 IGVDPGAFWSQMQAGVDVMDDVLNGVIKSVVFGVAVTFIALYQGYEAKATPEGVSRATTR 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D +     F+
Sbjct: 234 TVVIASLTVLALDFVLTALMFS 255


>gi|171462919|ref|YP_001797032.1| protein of unknown function DUF140 [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171192457|gb|ACB43418.1| protein of unknown function DUF140 [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 262

 Score =  222 bits (565), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 69/266 (25%), Positives = 130/266 (48%), Gaps = 8/266 (3%)

Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
           +  NL   +G  I + ++     A +L  V+  +G               +I Q+ +VG 
Sbjct: 3   ALLNLFGDLGFFIRRNLSSLGLAARMLVAVVFRSGFLLKRP-------RLVIDQILFVGN 55

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
               ++ +     G V+  QG + L+++G+E     L+++   RE+G ++TA++ AGR+G
Sbjct: 56  HSFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLTRELGPVITALLFAGRAG 115

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           +++ AEIG MK  E++ A+  M +D +  +I+PR+WA IIS+P+L  +     I+G  +V
Sbjct: 116 TSLTAEIGLMKAGEQLTAMEMMAVDPLGRVIAPRLWAGIISMPILATIFTAVGILGGYLV 175

Query: 286 IWKYYDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
                 +    F+S+        ++   GLIK+     A+  +A+ +G+        + +
Sbjct: 176 GVPLIGVDSGAFWSQMQGGVDLFSDTGNGLIKSMVYGVAVTFIALYQGYESRPTPEGVSQ 235

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370
             T  VV S   V+ +D L     F+
Sbjct: 236 ATTRTVVISSLSVLALDFLLTAMMFS 261


>gi|148264681|ref|YP_001231387.1| hypothetical protein Gura_2637 [Geobacter uraniireducens Rf4]
 gi|146398181|gb|ABQ26814.1| protein of unknown function DUF140 [Geobacter uraniireducens Rf4]
          Length = 401

 Score =  222 bits (565), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 75/368 (20%), Positives = 160/368 (43%), Gaps = 6/368 (1%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
             +   AG+W+        D V+  +  + +      +   +   D+     ++ F+ K 
Sbjct: 40  GALLTLAGDWRLGSAIPSPDGVIAGLGAAEKGQRLAFETGNLQGWDSG----LLVFLAKL 95

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
               +  G+S     L + +          ++           +    +    +  +  +
Sbjct: 96  FDICRRNGISVDESGLPAGVRKLIDLASPEKQRSGVTHGGEHPSFLVWVADTALAQVKGA 155

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                 +G       +       F+   + LI  +   G   +P+V LIS + G ++A  
Sbjct: 156 KEVLAFIGEATLAFVKMLRGKADFRR--MDLIVTIQETGAQALPIVTLISLLVGMILAFI 213

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            + QL  FGA+I+  D++ I  +R +G ++T ++++GR+G+A  A++G+M++NEEIDA+ 
Sbjct: 214 ASIQLKMFGAQIYVADVVGIGIVRVMGAIMTGIIMSGRTGAAFAAQLGTMQVNEEIDALE 273

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           T+G   V  L+ PR+ AL++ +PLL + ++   ++G  IV     D+ F  +  +  S  
Sbjct: 274 TLGFSPVEFLVLPRMLALMLMMPLLCVYSDLMGVLGGMIVGVGMLDLGFMEYVHQSRSAL 333

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            L +   GL  +      + +     G      ++++G   T+ VV  I  +++  ++  
Sbjct: 334 NLTHFLVGLFHSFVFGILVAVAGCLRGLQCERSASAVGYAATSAVVTGIVCIVVATAIIT 393

Query: 366 IFYFAIGI 373
           +    +GI
Sbjct: 394 LSCQVLGI 401


>gi|225024503|ref|ZP_03713695.1| hypothetical protein EIKCOROL_01378 [Eikenella corrodens ATCC
           23834]
 gi|224942654|gb|EEG23863.1| hypothetical protein EIKCOROL_01378 [Eikenella corrodens ATCC
           23834]
          Length = 258

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 71/262 (27%), Positives = 131/262 (50%), Gaps = 8/262 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G K + F+ +       L  V++ +G            L   IRQ+Y+ GV  +
Sbjct: 2   NFFRTLGAKTLDFLQELGKTTLFLFAVLARSGTLLPR-------LQLGIRQIYFTGVLSI 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG  QL++F +      +++   LRE+G +L  ++ A  +G A+
Sbjct: 55  VIIAVSGLFVGMVLGLQGYTQLAKFKSADILGYMVAASLLRELGPVLAGILFASSAGGAM 114

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            +EIG MK  E+++A++ M +D V  ++ PR WA +IS+PLL  + N + I GA ++  +
Sbjct: 115 TSEIGLMKTTEQLEAMKVMAVDPVARVVVPRFWAGVISMPLLASICNVAGIYGAYLIGVR 174

Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           Y  +   +F+S+  +   +  ++  GLIK+     AI ++A+ +GF        + +  T
Sbjct: 175 YLGLDGGIFWSQMQANIDVGYDVVNGLIKSVVFGVAISLIAVYQGFHCRSTPEGILRAST 234

Query: 348 TCVVQSISIVIIIDSLFAIFYF 369
             VV S   V+ +D +     F
Sbjct: 235 RTVVSSALTVLALDFVLTAIMF 256


>gi|328952205|ref|YP_004369539.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM
           11109]
 gi|328452529|gb|AEB08358.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM
           11109]
          Length = 255

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 70/260 (26%), Positives = 125/260 (48%), Gaps = 7/260 (2%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
               +G+  V F+ +    A +L              Y+++ F     RQ+ ++GV    
Sbjct: 3   FLTTLGRLWVHFLQELGGMALLLAQ---AGLWLPRRPYRWRHFF----RQLEFIGVKSFF 55

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +V+L    TG V+A Q  +   +FG E      +++   RE+G +LT++M+A R+GSA+ 
Sbjct: 56  IVVLTGLFTGMVLALQAYYGFRKFGGESLLGGAVALSMTRELGPVLTSLMVAARAGSAMA 115

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AE+G+MK+ E++DA+  M +  V  L  PR+ A +I  PLLT++A +  I+G   V    
Sbjct: 116 AELGAMKVTEQVDALLAMAVQPVHYLALPRLLAAVIMTPLLTVIAVYIGIVGGYFVGVIL 175

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            D+    F  +       ++++ GL K+      + +++  EG      +  +G   T  
Sbjct: 176 LDVNPGTFMQKMLEMVNSSDLYNGLFKSVIFGLLLALISCYEGLQAKGGAEGVGLVTTRA 235

Query: 350 VVQSISIVIIIDSLFAIFYF 369
           VV S   ++I D +     F
Sbjct: 236 VVYSAISILIADYILTALLF 255


>gi|256422329|ref|YP_003122982.1| hypothetical protein Cpin_3314 [Chitinophaga pinensis DSM 2588]
 gi|256037237|gb|ACU60781.1| protein of unknown function DUF140 [Chitinophaga pinensis DSM 2588]
          Length = 245

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 74/235 (31%), Positives = 125/235 (53%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             I+G  +  TG F  + ++        IRQ + VG   V +V +  F+ G V+  Q   
Sbjct: 1   MEIVGDQVLFTGRFARNIFRGGFEWGEFIRQCFIVGYLSVGLVGITGFIIGLVMTLQTQP 60

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L  FGAE +   ++SI  +REIG ++ A++ AG+  S+I AE+GSMK+ E+IDA+    
Sbjct: 61  TLKDFGAESYVPGMVSISIIREIGPVIIALICAGKIASSIGAELGSMKVTEQIDAMEVSA 120

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
            + V+ L+  RI A  I +PLLTI+A+  A++G  + +     +   +FF +       +
Sbjct: 121 ANPVQYLVVTRILACTIMVPLLTIMADGLAMLGGWVGVNIQDHVSATLFFKKSFKALEFS 180

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
           ++   +IK  F   AIG V   +G+     + S+GK   + VV +   +I+ID++
Sbjct: 181 DVVPSVIKTFFFGYAIGFVGCYKGYHSARGTESVGKAANSAVVSASLWIILIDAI 235


>gi|284051975|ref|ZP_06382185.1| hypothetical protein AplaP_10931 [Arthrospira platensis str.
           Paraca]
 gi|291567910|dbj|BAI90182.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 261

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 65/236 (27%), Positives = 114/236 (48%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +   G+      + K    + + QM  VG   + + +L +   G V   Q A +    GA
Sbjct: 21  LFLGGQVLLHVLQGKIHRRNTLEQMAIVGPESLFIALLTASFVGMVFTIQVAQEFIALGA 80

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
                 ++++   RE+  +LT+V+IAGR  SA  AE+G+M++ E+IDA+  M  D V  L
Sbjct: 81  GHLVGGVLALSLSRELTPVLTSVIIAGRVCSAFAAELGTMQVTEQIDALYMMKTDPVDYL 140

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PR+ A  + LPLLTI+   + + G  ++   +Y+IP  +F         L ++ +  I
Sbjct: 141 VIPRVLACSLMLPLLTIICLITGLAGGLLIATSFYNIPSVLFLDSIRDLMGLWDLISAEI 200

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           K+     AI ++    G      +  +G+  TT VV S+  + I+D   +   F +
Sbjct: 201 KSVVFGWAIAVIGTSWGLTTTGGAKGVGQSTTTAVVTSLLAIFILDFFLSWLLFKV 256


>gi|256828811|ref|YP_003157539.1| protein of unknown function DUF140 [Desulfomicrobium baculatum DSM
           4028]
 gi|256577987|gb|ACU89123.1| protein of unknown function DUF140 [Desulfomicrobium baculatum DSM
           4028]
          Length = 263

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 72/254 (28%), Positives = 128/254 (50%), Gaps = 6/254 (2%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
               S      +G     +          +  +  ++  +Y++G   + ++IL++F TG 
Sbjct: 11  LGATSLGIIKNVGQWGVFSLTAVLGMIHIRRLIPKILYDIYFIGFKSLNIIILVAFFTGM 70

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+  QG + L +F AE      +++  +RE+G +LTA+M+ GR+GS+I AEIG M+I+E+
Sbjct: 71  VLGLQGYYTLIKFSAEGMLGVAVALSLVRELGPVLTAIMLIGRAGSSISAEIGIMRISEQ 130

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+ TM +D VR L++P+I A +I  PLLT + +   I+G              +FFS+
Sbjct: 131 IDALSTMDVDPVRYLVTPKIIASLICFPLLTAIFDCVGILGGYFSSVL-LSSRSGIFFSK 189

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCVVQSIS 355
             S+  L+++  G IK+   A  +  ++   G+          +  +    T+ VVQS  
Sbjct: 190 IQSSLLLSDVTGGFIKSFVFAFIVITISCYCGYYTHQNQSSAGAEGVSNSTTSAVVQSCV 249

Query: 356 IVIIIDSLFAIFYF 369
            V++ D +   F  
Sbjct: 250 YVLVSDYVITSFLM 263


>gi|293602880|ref|ZP_06685319.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292818674|gb|EFF77716.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 262

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 61/263 (23%), Positives = 132/263 (50%), Gaps = 8/263 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N+   +G  + K I+         G +++ +G   +           + +Q++++G   +
Sbjct: 6   NMVGALGGWVRKQISGIGFFTRFFGGMLARSGIIFSRP-------RLVSQQVHFIGNYSL 58

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++
Sbjct: 59  LIIAVSGMFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTALLFAGRAGTSL 118

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG MK  E++ A+  M +D +R ++ PR+W  II++P+L  + +   ++G  +V   
Sbjct: 119 TAEIGLMKAGEQLSAMEMMAVDPIRRVLVPRLWGGIIAMPILAAVFSMVGVLGGWVVGVL 178

Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
              +    F+S+  +   +  ++  G+IK+      + +VA+ EG+        + +  T
Sbjct: 179 MIGVDAGAFWSQMQNGVDVWNDVANGVIKSVVFGITVTLVALYEGWQAKPTPEGVARATT 238

Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370
             VV     V+ +D L     F 
Sbjct: 239 RTVVVGSLAVLGLDFLLTALMFG 261


>gi|330430336|gb|AEC21670.1| hypothetical protein PT7_3130 [Pusillimonas sp. T7-7]
          Length = 262

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 59/263 (22%), Positives = 130/263 (49%), Gaps = 8/263 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
            L   +G ++   I+   +   + G +++ +                + +Q++++G   +
Sbjct: 6   QLIAALGARVRNSISGMGAFMRLAGAILARSDIVFKRP-------GLISQQIHFIGNYSL 58

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++
Sbjct: 59  LIIAVSGLFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTALLFAGRAGTSL 118

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG MK  E+I A+  M +D +R +++PR W  ++++P+L  + +   IIG  IV   
Sbjct: 119 TAEIGLMKAGEQIAAMEVMAVDPIRRVLAPRFWGGVVAMPVLAAVFSMVGIIGGWIVGVV 178

Query: 289 YYDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
              I    F+S+         ++  G +K+     A+ ++A+  G+        + +  T
Sbjct: 179 LIGIDPGAFWSQMQGGVDVFKDVLNGFVKSVVFGVAVTLIALHAGWTAKATPEGVSRATT 238

Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370
             VV    +V+ +D +     F+
Sbjct: 239 RTVVSGSLMVLGLDFILTALMFS 261


>gi|16127925|ref|NP_422489.1| ABC transporter permease [Caulobacter crescentus CB15]
 gi|221236745|ref|YP_002519182.1| organic solvent resistance transport system permease [Caulobacter
           crescentus NA1000]
 gi|13425459|gb|AAK25657.1| ABC transporter, permease protein, putative [Caulobacter crescentus
           CB15]
 gi|220965918|gb|ACL97274.1| organic solvent resistance transport system permease [Caulobacter
           crescentus NA1000]
          Length = 269

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 72/254 (28%), Positives = 123/254 (48%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      + +   ++G V         ++     FL  L RQ+  +G   +PVV L +  
Sbjct: 15  IQALGRSTLATVRMVGAVGVFAVRGVIAALTPIWFLSQLRRQIVAIGFFSLPVVGLTAVF 74

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TGA +A        +F AE     ++++   RE+G +L A+M+AGR  +AI AEIG+M+ 
Sbjct: 75  TGAALALNIFTGGGRFNAEQVMPQIVALGITRELGPVLAALMLAGRVSAAIAAEIGAMRA 134

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+RT+  D  R L++PR+ A +++LPLLT +A+   I G  +V  +  +    V+
Sbjct: 135 TEQIDAMRTLSTDPFRYLVAPRLLAAVLTLPLLTAVADIIGIAGGWLVATRVLEFNPTVY 194

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                      +I +GLIKA      + ++    G+     +  +G+  T  VV S  ++
Sbjct: 195 IRNTIDFLESWDIISGLIKAAVFGFIVALMGCYHGYNASGGARGVGRATTHAVVSSAILI 254

Query: 358 IIIDSLFAIFYFAI 371
              D L    +  +
Sbjct: 255 FATDYLLTTLFTHM 268


>gi|114321371|ref|YP_743054.1| hypothetical protein Mlg_2222 [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227765|gb|ABI57564.1| protein of unknown function DUF140 [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 259

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 127/264 (48%), Gaps = 8/264 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
                 ++G + +  +        ++  +++      A           +I+Q+Y VGV 
Sbjct: 2   ITAAFRNLGARTLAALGGVGRAHLLMFRLLAGLLRVLAQPRY-------IIQQLYAVGVL 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++++     G V+A QG + L  FGA      L+++  LRE+G ++TA++ AGR+GS
Sbjct: 55  SLVIIVVSGLFVGMVLALQGYYTLVDFGAAESVGVLVALSLLRELGPVVTALLFAGRAGS 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           ++ AE+G MK  E++ ++  M +D    +I+PR  A ++++PLL  + +   I G  +V 
Sbjct: 115 SLTAEVGLMKATEQLSSMEMMAVDPELRVIAPRFLACVVAVPLLAGIFSLVGIYGGYLVS 174

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                +    ++    S  + + ++  G+IK+      +G +A+ +G+     S  + + 
Sbjct: 175 VGLIGLDGGAYWGNMQSAVSFSDDVLNGVIKSVVFGIVVGWIALYKGYEAVPTSEGVSRA 234

Query: 346 VTTCVVQSISIVIIIDSLFAIFYF 369
            T  VV +   V+ +D L     F
Sbjct: 235 TTHGVVHASLAVLGLDFLLTALMF 258


>gi|313894582|ref|ZP_07828145.1| conserved hypothetical protein [Veillonella sp. oral taxon 158 str.
           F0412]
 gi|313440772|gb|EFR59201.1| conserved hypothetical protein [Veillonella sp. oral taxon 158 str.
           F0412]
          Length = 256

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 70/263 (26%), Positives = 126/263 (47%), Gaps = 9/263 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N    IG+ ++  ++   S   ++   I                L  + +QM ++GV 
Sbjct: 3   LLNWLESIGRTVINGLSQMGSATLLVWHTIKQLKMI---------NLWHVFQQMAHLGVD 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +P++ L     GAV+  Q    L  +GA+     LM++   RE+G +L  V++AGR G+
Sbjct: 54  SLPIISLTLLFAGAVMTLQITDVLITYGAQSTVGGLMAVAMGRELGPILVGVVLAGRVGA 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           AI AEIG+MK+ E+IDA+R M +D V  L+ PR+ A ++ +P+L        I G   V 
Sbjct: 114 AITAEIGTMKVTEQIDALRVMAVDPVGYLVVPRVVACMVMVPILAFYGVVIGIAGGYFVA 173

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
                +  + +       +T+++   GLIK+      I +V   +G    + + ++G   
Sbjct: 174 TAIKGLAPSTYLDSIQMFSTISDFTLGLIKSSVFGAVIALVGAYKGMETKMGAEAVGFST 233

Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369
           T+ VV SI +V +++   +   +
Sbjct: 234 TSSVVTSIILVFVLNYFLSTLLY 256


>gi|94987489|ref|YP_595422.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731738|emb|CAJ55101.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 386

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 87/365 (23%), Positives = 164/365 (44%), Gaps = 7/365 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
             F+GNW+  +    A      +N  +      +  +++   D+     ++ F++    K
Sbjct: 29  ISFSGNWQLNQPIPDATRFASQLNYPV-VKELYLKTNSLGIWDSS----LIAFIKTLINK 83

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
            + Q ++ +  +L + I    +   +    + +    +  +   +IG   +   +     
Sbjct: 84  AQSQQITINDHELPAGIKNLIQLAFQTPPNKEAHKKTTQISFLEYIGDITLSLPSTIQKI 143

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG +  +T               ++ R M   GV  +P+V LIS + G ++A  G  
Sbjct: 144 LTFLGEMTLSTKRLITGHSD--CSSTNIWRCMQQAGVEALPIVSLISLLVGLILAFVGVI 201

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           QL  FGAEI+   L++I   R +G ++T V+++GR+G++  A IG+M +NEEIDA+ T G
Sbjct: 202 QLRMFGAEIYVSSLVAIGMTRIMGAVMTGVILSGRTGASYAATIGTMNVNEEIDALMTFG 261

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +     L+ PR+ AL    PLL + ++F  ++G  IV      I    + +       L 
Sbjct: 262 IRPSDFLVMPRLIALTTMTPLLVVYSDFMGMLGGFIVGVGVLGIEPLEYINFTQKGFALK 321

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           N++ G+I        I I    +G   G +++++G   T+ VV SI  ++I  +   I +
Sbjct: 322 NLWVGIIHGIAFGIIIAITGCYQGLNSGKNASAVGLATTSAVVYSIVGIVIATACLTIIF 381

Query: 369 FAIGI 373
               I
Sbjct: 382 NIFNI 386


>gi|209526324|ref|ZP_03274853.1| protein of unknown function DUF140 [Arthrospira maxima CS-328]
 gi|209493253|gb|EDZ93579.1| protein of unknown function DUF140 [Arthrospira maxima CS-328]
          Length = 261

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 65/236 (27%), Positives = 114/236 (48%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +   G+      + K    + + QM  VG   + + +L +   G V   Q A +    GA
Sbjct: 21  LFLGGQVLLHILQGKIHRRNTLEQMAIVGPESLFIALLTASFVGMVFTIQVAQEFITLGA 80

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
                 ++++   RE+  +LT+V+IAGR  SA  AE+G+M++ E+IDA+  M  D V  L
Sbjct: 81  GHLVGGILALSLSRELTPVLTSVIIAGRVCSAFAAELGTMRVTEQIDALYIMKTDPVDYL 140

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PR+ A  + LPLLTI+   + + G  ++   +Y+IP  +F         L ++ +  I
Sbjct: 141 VIPRVLACSLMLPLLTIICLITGLAGGLLIATSFYNIPSVLFLDSIRDLMGLWDLISAEI 200

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           K+     AI ++    G      +  +G+  TT VV S+  + I+D   +   F +
Sbjct: 201 KSLVFGWAIAVIGTSWGLTTTGGAKGVGQSTTTAVVTSLLAIFILDFFLSWLLFKV 256


>gi|167645294|ref|YP_001682957.1| hypothetical protein Caul_1329 [Caulobacter sp. K31]
 gi|167347724|gb|ABZ70459.1| protein of unknown function DUF140 [Caulobacter sp. K31]
          Length = 270

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 72/251 (28%), Positives = 121/251 (48%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      + +   ++G V         ++     FL  L RQ   +G   +PVV L +  
Sbjct: 15  IRALGRSTLAAVRMVGGVGVFAVRGTVAALTPPWFLGQLWRQFVAIGFFSLPVVGLTAVF 74

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TGA +A        +F AE     ++++   RE+G +L A+M+AGR  +AI AEIG+M+ 
Sbjct: 75  TGAALALNIFTGGGRFNAEQVMPQIVALGITRELGPVLAALMLAGRVSAAIAAEIGAMRA 134

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+RT+  D  R L+ PR+ A ++ LP+LT +A+   + G  +V  +  D   AV+
Sbjct: 135 TEQIDAMRTLSTDPFRYLVGPRLLAGVLMLPILTAVADTIGVAGGWLVATRVLDFSSAVY 194

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                      ++ +GLIKA      + ++    G+     +  +G+  T  VV S  ++
Sbjct: 195 IRNTLDFLQGWDVISGLIKAAVFGFIVALMGCYHGYNAKGGARGVGRATTHAVVSSAILI 254

Query: 358 IIIDSLFAIFY 368
              D L   F+
Sbjct: 255 FASDYLLTTFF 265


>gi|83748206|ref|ZP_00945233.1| toluene tolerance protein TTG2B [Ralstonia solanacearum UW551]
 gi|207721840|ref|YP_002252278.1| abc-type transport system involved in resistance to organic
           solvents, permease component protein [Ralstonia
           solanacearum MolK2]
 gi|207744518|ref|YP_002260910.1| abc-type transport system involved in resistance to organic
           solvents, permease component protein [Ralstonia
           solanacearum IPO1609]
 gi|300702838|ref|YP_003744439.1| hypothetical protein RCFBP_10489 [Ralstonia solanacearum CFBP2957]
 gi|83725174|gb|EAP72325.1| toluene tolerance protein TTG2B [Ralstonia solanacearum UW551]
 gi|206587007|emb|CAQ17591.1| abc-type transport system involved in resistance to organic
           solvents, permease component protein [Ralstonia
           solanacearum MolK2]
 gi|206595924|emb|CAQ62851.1| abc-type transport system involved in resistance to organic
           solvents, permease component protein [Ralstonia
           solanacearum IPO1609]
 gi|299070500|emb|CBJ41795.1| conserved membrane protein of unknown function, DUF140 [Ralstonia
           solanacearum CFBP2957]
          Length = 255

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 63/262 (24%), Positives = 127/262 (48%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG  +   I+     A +L  ++    +              LI Q+ ++G     
Sbjct: 1   MISSIGFLVRVLISRLGYAARMLMALLGAWRDVLRRP-------RLLIEQLRFIGNDSFI 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK NEE+ A+  M +D +  +++PR W   I++PLL  + +   I+G   V    
Sbjct: 114 AEIGLMKANEELIAMEMMAVDPLARVLAPRFWGGFIAMPLLAAIFSAVGIVGGYFVGVGL 173

Query: 290 YDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+  +    + ++  G+IK+     A+  VA+ +G+        + +  T 
Sbjct: 174 IGVDPGAFWSQMQAGVDVVDDVINGVIKSVVFGVAVTFVALYQGYEAKATPEGVSRATTR 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D +     F+
Sbjct: 234 TVVIASLAVLALDFVLTALMFS 255


>gi|226953846|ref|ZP_03824310.1| toluene tolerance efflux ABC transporter membrane protein
           [Acinetobacter sp. ATCC 27244]
 gi|294651661|ref|ZP_06728964.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Acinetobacter
           haemolyticus ATCC 19194]
 gi|226835406|gb|EEH67789.1| toluene tolerance efflux ABC transporter membrane protein
           [Acinetobacter sp. ATCC 27244]
 gi|292822440|gb|EFF81340.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Acinetobacter
           haemolyticus ATCC 19194]
          Length = 258

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 72/263 (27%), Positives = 132/263 (50%), Gaps = 9/263 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G+ +++ I    + + +L  ++ +           KG     I QMY VGV  +
Sbjct: 2   NTIAWLGRLVIERIKGIGAASLMLLQILFSM--------PSKGGFQRFIYQMYRVGVMSL 53

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG   L   G+E     ++S+  LRE+  ++ A++ AGR+GSA+
Sbjct: 54  LIISVSGLFIGLVLGLQGYSILVNVGSEAMLGTMVSLTLLRELAPVVAALLFAGRAGSAL 113

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIGSMK +E++ ++  +G+D ++ ++SPR+WA I+SLP+LT++     I+G  +V   
Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIVGGKLVGVD 173

Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +    F+    S+     ++  G+IK+   A     VA+ +G+A       +   +T
Sbjct: 174 FLGVDEGSFWGGMQSSVQFGHDVVNGIIKSIVFALICTWVAVYQGYACDPTPEGIATSMT 233

Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370
             VV S   V+  D +     F 
Sbjct: 234 RTVVYSSLCVLGFDFVLTAVMFG 256


>gi|289207570|ref|YP_003459636.1| hypothetical protein TK90_0385 [Thioalkalivibrio sp. K90mix]
 gi|288943201|gb|ADC70900.1| protein of unknown function DUF140 [Thioalkalivibrio sp. K90mix]
          Length = 260

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 67/257 (26%), Positives = 120/257 (46%), Gaps = 1/257 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I      S +   + G       +  AS           + Q+Y VGV  + ++I+   
Sbjct: 4   AIASLGRSSLNALVVFGRAFLFLLQVLASLDIVIRRFGLTVVQIYSVGVRSLLIIIVSGL 63

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L  FGA      ++++  +RE+G ++TA++ AGR+GSA+ AE+G MK
Sbjct: 64  FVGMVLGYQGYITLVNFGAAEALGGVVALSLVRELGPVVTALLFAGRAGSALTAELGLMK 123

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ A+  M ++  R + +PR  A  +S+PLL  + +   ++G  IV      +    
Sbjct: 124 TTEQLSAMEMMAVNPYRRIFAPRFVAGFLSMPLLAAIFSAVGVMGGYIVGVGMLGVDSGA 183

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           +FS+  S      ++ +G+IK+      +  +A+ +GF     S  + +  T  VV S  
Sbjct: 184 YFSQMQSVTDWNEDVLSGVIKSIVFGFVVTWIAVFQGFNAMPTSEGISRATTQTVVVSSL 243

Query: 356 IVIIIDSLFAIFYFAIG 372
            V+ +D +     F  G
Sbjct: 244 AVLGLDFILTGLMFGTG 260


>gi|146302050|ref|YP_001196641.1| hypothetical protein Fjoh_4314 [Flavobacterium johnsoniae UW101]
 gi|146156468|gb|ABQ07322.1| protein of unknown function DUF140 [Flavobacterium johnsoniae
           UW101]
          Length = 252

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 63/239 (26%), Positives = 114/239 (47%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +    +G        F    +         ++Q Y +G   +P+V +  F+ G V+  
Sbjct: 5   LKNTFAQIGNAALFANRFFKEVFIPPYETKEFLKQCYLIGYKSLPLVAITGFIMGLVLTI 64

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q    L  FGAE +   ++++  +REI  ++TA++ AG+  S I AE+GSMK+ E+IDA+
Sbjct: 65  QSRPTLVTFGAESWLPGMVALSLIREIAPVITALICAGKISSGIGAELGSMKVTEQIDAM 124

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
               ++    L+  RI A  + +P+L I A+   IIG    I  + D+ F  + ++   +
Sbjct: 125 EVSAINPYNYLVVTRILACTLMVPILVIFADAVGIIGGYAGINIHGDVNFYRYLTQIIQS 184

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              +++    IK  F    IG++   +GF     + S+G    + VV +   + IID +
Sbjct: 185 LEFSDLIPATIKTFFFGYFIGMIGCYKGFNAANGTESVGHAANSAVVTASLSIFIIDMV 243


>gi|198282478|ref|YP_002218799.1| hypothetical protein Lferr_0338 [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218667295|ref|YP_002424668.1| toluene tolerance protein Ttg2B, putative [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|198246999|gb|ACH82592.1| protein of unknown function DUF140 [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218519508|gb|ACK80094.1| toluene tolerance protein Ttg2B, putative [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 260

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 71/265 (26%), Positives = 139/265 (52%), Gaps = 8/265 (3%)

Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
           +F     ++G++ ++ + +  + +  L L +        S       +  L++Q+Y  GV
Sbjct: 2   AFMEFIPNLGRRTLRTVPNLGTASRFLLLSLFAVANRHFS-------IQQLLKQVYGFGV 54

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             + ++++ +F TG V+  QG + L +FGA      L+++  LRE+G +LTA++ AGR+G
Sbjct: 55  RSLLLMMVAAFFTGMVLGFQGYYALVRFGATSALGTLVALSLLRELGPVLTALLFAGRAG 114

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           SA+ AEI SMK  E++ A+  M ++ +  +++PR+WA I+ +P+L ++ +   I G  ++
Sbjct: 115 SALTAEISSMKATEQLSAMEMMAVNPLAWVVAPRLWAGILVVPILCVIFDLVGIFGGYLI 174

Query: 286 IWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
                 +    F+++  S    + +I TGL KA      +  +A  +G+A    +  +G 
Sbjct: 175 SVPVLGVDGGTFWAQMQSNVAFSGDILTGLFKALCFGLVVTWIAAWQGYAAQPTAEGVGN 234

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYF 369
             T  VV +   V+ +D +   F F
Sbjct: 235 ATTISVVTASLAVLGLDFILTAFLF 259


>gi|317485263|ref|ZP_07944144.1| hypothetical protein HMPREF0179_01497 [Bilophila wadsworthia 3_1_6]
 gi|316923554|gb|EFV44759.1| hypothetical protein HMPREF0179_01497 [Bilophila wadsworthia 3_1_6]
          Length = 265

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 67/250 (26%), Positives = 122/250 (48%), Gaps = 5/250 (2%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG       E     +      + +++Q+Y +G   + V+ LI+  TG V+  
Sbjct: 15  FLRWIDALGDTFLFLLEGLRQIFIAPKLFIKVLQQLYVIGTKSLFVICLIALFTGMVLGL 74

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG + L +FG+  F    +S+  +RE+G +LTA+M+ GR+GS++ AEIG M+I ++IDA+
Sbjct: 75  QGYYVLVKFGSVGFLGAAVSLTLIRELGPVLTAIMVTGRAGSSMAAEIGVMRITDQIDAL 134

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +  +  L++PR  A +I+ PLLT + +   IIG  +       +    +F    S+
Sbjct: 135 EVMDIPGMGYLVAPRFVASLIAFPLLTAIFDVVGIIGGYLTGVLLLGVNEGAYFHGIESS 194

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCVVQSISIVII 359
             + ++  G IK+   A  I ++   +G+       G+   ++    T+ VV S   V++
Sbjct: 195 VLMPDVTEGFIKSFVFALLIALICCYQGYNAHRRRDGMGPEAVANATTSAVVISCVFVLV 254

Query: 360 IDSLFAIFYF 369
            D +      
Sbjct: 255 ADYVVTSAML 264


>gi|262373545|ref|ZP_06066823.1| toluene tolerance efflux transporter [Acinetobacter junii SH205]
 gi|262311298|gb|EEY92384.1| toluene tolerance efflux transporter [Acinetobacter junii SH205]
          Length = 258

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 71/263 (26%), Positives = 132/263 (50%), Gaps = 9/263 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G+ +++ +    + + +L  ++ +           KG     I QMY VGV  +
Sbjct: 2   NTIAWLGRLVIERVKGIGAASLMLIQILFSM--------PSKGGFQRFIYQMYRVGVMSL 53

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG   L   G+E     ++S+  LRE+  ++ A++ AGR+GSA+
Sbjct: 54  LIISVSGLFIGLVLGLQGYSILVNVGSEAMLGTMVSLTLLRELAPVVAALLFAGRAGSAL 113

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIGSMK +E++ ++  +G+D ++ ++SPR+WA I+SLP+LT++     I+G  +V   
Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIVGGKLVGVD 173

Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +    F+    S+     ++  G+IK+   A     VA+ +G+A       +   +T
Sbjct: 174 FLGVDEGSFWGGMQSSVQFGHDVVNGIIKSVVFALICTWVAVYQGYACDPTPEGIATSMT 233

Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370
             VV S   V+  D +     F 
Sbjct: 234 RTVVYSSLCVLGFDFVLTAVMFG 256


>gi|238928172|ref|ZP_04659932.1| ABC superfamily ATP binding cassette transporter permease protein
           [Selenomonas flueggei ATCC 43531]
 gi|238884132|gb|EEQ47770.1| ABC superfamily ATP binding cassette transporter permease protein
           [Selenomonas flueggei ATCC 43531]
          Length = 255

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 70/252 (27%), Positives = 122/252 (48%), Gaps = 1/252 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +        +    +G V+   GE      + +  + S+I QM ++G   + +V L    
Sbjct: 5   LESVGAFVLTHLANIGRVVLLYGETMRQVTR-RLRVRSIIYQMAHLGADSLLIVGLTLLF 63

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG V+  Q A +  ++GA+     +++I   RE+G +L  V+ AGR G+AI AE+ +MK+
Sbjct: 64  TGIVLTLQIAHEFIRYGAQSTIGAVIAIGIGRELGPVLVGVVCAGRVGAAITAEVSTMKV 123

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+R M +  V  LI PR+ A ++ +P+LT+  +   ++G       Y  I    F
Sbjct: 124 TEQIDALRVMAVSPVNYLIVPRMLACMVVVPILTVFGDVIGVLGGYFTAVYYSGISGYTF 183

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                  A + ++  GLIKA F    I ++    G      +  +G      VV SI ++
Sbjct: 184 LHSITQYAEIYDMTGGLIKAIFFGNVIAVLGCHYGLNAPGGAEGVGTATMQTVVTSIIVI 243

Query: 358 IIIDSLFAIFYF 369
            I++++   F F
Sbjct: 244 FILNAVLTFFLF 255


>gi|326800463|ref|YP_004318282.1| hypothetical protein Sph21_3067 [Sphingobacterium sp. 21]
 gi|326551227|gb|ADZ79612.1| protein of unknown function DUF140 [Sphingobacterium sp. 21]
          Length = 254

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 73/228 (32%), Positives = 116/228 (50%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG V      F             +I Q Y VGV  +P++ L  F+TG V   Q    L 
Sbjct: 13  LGNVHHFIMRFFKELVMPPYEFKEIINQCYEVGVKSLPLISLTGFITGIVFTNQSRPSLE 72

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            FGA      L++I  +R +  L+TA++ AG+ GS I AE+GSMK+ E+IDA+   G + 
Sbjct: 73  DFGATAMLPSLIAIAIVRALAPLVTALIAAGKVGSNIGAELGSMKVTEQIDAMEVSGTNP 132

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
            + L+  R+ A  I +P+L+    F  ++G+ + ++++  + F  FF +   T T  +IF
Sbjct: 133 FKFLVVSRVLATTIMIPILSCYTGFVGLMGSFLNVYQHESVSFISFFDQVFETVTFLDIF 192

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
             +IKA F    IGIV   +G+     +  +GK     VV S+ ++ I
Sbjct: 193 QAIIKAAFFGFTIGIVGCYQGYNSSKGTEGVGKAANAAVVASMFLIFI 240


>gi|220917185|ref|YP_002492489.1| protein of unknown function DUF140 [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219955039|gb|ACL65423.1| protein of unknown function DUF140 [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 251

 Score =  220 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 66/247 (26%), Positives = 115/247 (46%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
            ++         G +I   GE  A +++       ++ QM ++G     +V +     G 
Sbjct: 1   MLSRLRDAFEDFGRMILFAGEIVAWAFRPPFRPDQILAQMAFIGAGSAFIVGVTGTFAGM 60

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V   Q  + L QF AE ++    +    RE+  + TA+M+ GR+GSAI  E+G+M++ E+
Sbjct: 61  VFGLQMNYALRQFAAEGYTGGSTAFALARELSPVFTALMVTGRAGSAITTELGTMRVTEQ 120

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+ TM +  ++ L+ PR+ A I+  P+LT+L N     GA ++      IP   F   
Sbjct: 121 IDAMETMAVSPIQYLVVPRVVASILMFPVLTMLFNALGYGGAYVMGVFVSGIPEGPFIQH 180

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                   +IF GL KA      + ++    G+A    +  +G+  T  VV S   +++ 
Sbjct: 181 TREFLGPNDIFHGLGKAVLFGYIVAVITTWRGYAASGGARGVGEGTTRAVVASSVAILVA 240

Query: 361 DSLFAIF 367
           D    + 
Sbjct: 241 DYAGTVL 247


>gi|94986675|ref|YP_594608.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94730924|emb|CAJ54287.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 266

 Score =  220 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 78/259 (30%), Positives = 128/259 (49%), Gaps = 5/259 (1%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + ++     + S    LG +     E     +         IRQ+Y +G   + V+ LI 
Sbjct: 7   QLVILLGQWTISICITLGEIFLFLLEGFRQIFITPKLCSKAIRQIYVIGTKSLFVISLIG 66

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
             TG V+  QG + L +FG+  F    +S+  +RE+G +LTA+MI  R+GS++ AEIG M
Sbjct: 67  LFTGMVLGLQGYYVLIKFGSVGFLGSAVSLTLIRELGPVLTAIMIIARAGSSMTAEIGVM 126

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           +I ++IDA+  M +  +  L+SPRI A +IS PLLT + +   IIG  +       +   
Sbjct: 127 RITDQIDALEVMDIPGIGYLVSPRIVASLISFPLLTAVFDVIGIIGGYLTGVCLLGVNEG 186

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCV 350
            +FS   S+ TL++I  G IKA   A  + ++   +G+       G    ++    T+ V
Sbjct: 187 AYFSSIESSTTLSDINEGSIKALTFAILVILICCYKGYNAHRRRDGRGPEAVANATTSAV 246

Query: 351 VQSISIVIIIDSLFAIFYF 369
           V S  +V+I D +      
Sbjct: 247 VVSCVLVLIADYVVTSAML 265


>gi|56476144|ref|YP_157733.1| organic solvent resistance ABC transporter permease [Aromatoleum
           aromaticum EbN1]
 gi|56312187|emb|CAI06832.1| predicted ABC-type transport system involved in resistance to
           organic solvents, permease component [Aromatoleum
           aromaticum EbN1]
          Length = 264

 Score =  220 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 64/266 (24%), Positives = 129/266 (48%), Gaps = 8/266 (3%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
           N    L   +G  +   +      A   GL++  +G+     +         IR++Y+ G
Sbjct: 2   NGLLALVRRLGGAVTDAVWRLGFAARFFGLLLLYSGQSLLRVH-------LTIREVYFSG 54

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
           V  + ++++     G V+  QG   L +FG+      L+++   RE+G ++ A++ A R+
Sbjct: 55  VLSLLIIVVSGLFVGMVLGLQGYETLQRFGSGDALGVLVALSLTRELGPVVAALLFASRA 114

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           GSA+ AEIG MK  E++ A+  M ++ +  +++PR W  +IS+PLL  L +   + G  +
Sbjct: 115 GSAVTAEIGLMKATEQLKAMDMMAVNPIARVVAPRFWGGVISMPLLAALFSAMGVFGGWL 174

Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           +      +    F+S+  +      ++  G+IK+     A+ ++A+ EG+     +  + 
Sbjct: 175 IGVVLIGVDEGAFWSQMQAAVDFRFDVVNGVIKSVVFGAAVSLIAVFEGYDCTPTAEGVS 234

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYF 369
           + +T  VV S   ++ +D +   F F
Sbjct: 235 RAITRTVVSSALAILALDFVLTSFMF 260


>gi|284049033|ref|YP_003399372.1| protein of unknown function DUF140 [Acidaminococcus fermentans DSM
           20731]
 gi|283953254|gb|ADB48057.1| protein of unknown function DUF140 [Acidaminococcus fermentans DSM
           20731]
          Length = 260

 Score =  220 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 123/261 (47%), Gaps = 9/261 (3%)

Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171
             +G+K+V     +    ++        G               ++RQM  +G   +P+V
Sbjct: 8   RWVGRKMVDLCARTGRVVNLFLEACRAAGTADRR---------EVLRQMARLGADSLPIV 58

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
            +    TG V++ Q A +  +FGA      +++I   RE+  +LT V++AGR G+AI AE
Sbjct: 59  SMTILCTGMVMSVQTAKEFVRFGAADSVGGIVAIAMGRELSPILTGVVVAGRIGAAIAAE 118

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           IG+MK+ E+IDA+R M +  +R L++PR+ A+++ +P+L + AN    +G   V   Y  
Sbjct: 119 IGTMKVTEQIDALRVMAVSPIRFLVTPRLLAIVLMMPVLVVYANLVGDVGGWFVAENYAG 178

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
           I   +F           +I  GLIK       I  +   +G      +  +G   T  VV
Sbjct: 179 ISSHMFLESIRGFIEPWDIIGGLIKGAVFGAIIATIGCHKGLNAQQGAEGVGMATTKSVV 238

Query: 352 QSISIVIIIDSLFAIFYFAIG 372
            SI ++ I +   ++  +  G
Sbjct: 239 LSIILIFIANYFLSVILYVHG 259


>gi|30250308|ref|NP_842378.1| hypothetical protein NE2383 [Nitrosomonas europaea ATCC 19718]
 gi|30181103|emb|CAD86295.1| Domain of unknown function DUF140 [Nitrosomonas europaea ATCC
           19718]
          Length = 271

 Score =  220 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 64/266 (24%), Positives = 126/266 (47%), Gaps = 8/266 (3%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
              + +   IG ++   I         + LV+  +                + R++Y+ G
Sbjct: 9   KRIRTIIESIGHRVADSIWRLGCATRFVLLVLLKSLPSFLR-------FHLITREIYFAG 61

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
           V  + ++++     G V+  QG   L +FG+E     L+++  +RE+G ++ A++ A R+
Sbjct: 62  VLSLIIILVSGLFVGMVLGLQGYETLQKFGSESAVGTLVALSLVRELGPVIAALLFASRA 121

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           GSA+ AEIG MK  E++ A+  M +D +  +++PR W  + S+PLL  + +   + G  +
Sbjct: 122 GSAMTAEIGLMKATEQLAAMGMMAVDPIARIVAPRFWGGVFSMPLLAAMFSVMGVFGGYL 181

Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           V   +  +    F+S+  ++     +I  G+IK+ F    +  +A+ EGF     +  + 
Sbjct: 182 VTVVFIGVDEGSFWSQMQNSVDFRYDIVNGVIKSCFFGVVVTAIAVFEGFDAPPTAEGVS 241

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYF 369
              T  VV S   ++ +D +   F F
Sbjct: 242 GATTRTVVTSSLAILGLDFVLTAFMF 267


>gi|242310202|ref|ZP_04809357.1| ABC transporter [Helicobacter pullorum MIT 98-5489]
 gi|239523499|gb|EEQ63365.1| ABC transporter [Helicobacter pullorum MIT 98-5489]
          Length = 365

 Score =  220 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 100/381 (26%), Positives = 169/381 (44%), Gaps = 26/381 (6%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAIT---------EID 51
           M++      R  G W               I+KSI S    + L+ +          ++D
Sbjct: 1   MTKKENATLRLDGIWDY------------RISKSILSQLQAIKLTNVKINIVLGEHFDLD 48

Query: 52  TIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLH 111
             G  +++ F+ +   + ++     +  Q         +     + P  +    +   +H
Sbjct: 49  FCGGGVLLEFVTELESQQRIL---ENQLQQNPKSQKIFKILSTKEIPSNTNLTQNIIKIH 105

Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171
                 I   I         LG ++        +    +  L +    +    +  V +V
Sbjct: 106 SDSFIIIKNNIKTLILSLGFLGEILYTFLASFINFKSIR--LKATFYFIQESLIKAVGIV 163

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
            L  F+ G VIA QG+ QL QFGA I  +++ S+L LRE+  ++TA++IAGRS SA  AE
Sbjct: 164 ALACFLIGIVIAYQGSIQLRQFGASILIVEMSSMLTLREMAPIITAIIIAGRSASAFSAE 223

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           IG M+  +EIDA+R MG + +  L+ PR+ AL   LPL+  +A+   ++G+  V     D
Sbjct: 224 IGMMRATQEIDAMRVMGFNPMTFLVVPRMLALCCVLPLVVFIADLFGLVGSMFVCQIQLD 283

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
           I    F  RF     + + + G+ KAPF    I  +    GF+V   + S+G   T  VV
Sbjct: 284 ISTEQFLERFLQMVDMRHFWVGIAKAPFFGLIISFIGCFHGFSVAKDTRSIGVHTTKSVV 343

Query: 352 QSISIVIIIDSLFAIFYFAIG 372
           +SI  VI  D++ ++ +  +G
Sbjct: 344 ESIFFVIAFDAICSVIFTEMG 364


>gi|262042753|ref|ZP_06015907.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|259039978|gb|EEW41095.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
          Length = 260

 Score =  220 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++I+   
Sbjct: 5   ALAALGHRGIKTTATFGRAGLMLFNAVVGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGL 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGSVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLTI+     I G ++V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGALVGVSWKGIDGGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F++   +      ++   LIK+   A  +  +A+  G+     S  + +  T  VV +  
Sbjct: 185 FWTAMQNAVDWRMDLVNCLIKSLVFAITVTWIALFNGYDAVPTSAGISRATTRTVVHASL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|329113573|ref|ZP_08242353.1| Putative ABC transporter permease protein [Acetobacter pomorum
           DM001]
 gi|326697095|gb|EGE48756.1| Putative ABC transporter permease protein [Acetobacter pomorum
           DM001]
          Length = 385

 Score =  220 bits (561), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 79/375 (21%), Positives = 158/375 (42%), Gaps = 16/375 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           + +G+      G W        A              +  ++ +++   D+     +   
Sbjct: 24  TADGVC-LNVEGAWTVQAGG--ATPFPQDKLPIEPGHTLHINTTSLKNWDSAFVAFLWDV 80

Query: 62  ME---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            +   K       Q +    ++L +L+         +   + +    + + +   +G   
Sbjct: 81  KQAASKAQLHFDEQNLPAPAQRLLALL--------PDAPAEPAQPPRNNEGIFARVGDMT 132

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +  + ++ + + +         +        +  +  L+  ++  G   + +V +++F+ 
Sbjct: 133 LNGLTETGTVSELALDTAKGAAQAVRGKSAMR--MKDLLLDIWNAGPDALLIVGIVNFLV 190

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA++A  G  +L +F AEI+  DL+ I   REI  ++TA+++AGR+G A  A I +M  N
Sbjct: 191 GAILAFVGLVELRKFAAEIYVTDLVGIACAREISAIMTAIIMAGRTGGAYAARISTMLGN 250

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA++  G+     ++ P I +L + +PLL +     AI G   V     D+    ++
Sbjct: 251 EEIDALQVFGIPISSYILLPSIVSLALMMPLLYLYGTIVAIFGGFAVSMSMMDVSPIGYW 310

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
                   L     G IK+ F A  I + A + G   G  +  +G   T  VV  I  +I
Sbjct: 311 ISTFDGVELKEFIFGFIKSFFFASFIALAACRVGLKAGRSAADVGIAATRAVVIGIVGII 370

Query: 359 IIDSLFAIFYFAIGI 373
            +D++FA+   A+GI
Sbjct: 371 AMDAIFAVIANALGI 385


>gi|282899746|ref|ZP_06307709.1| protein of unknown function DUF140 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195361|gb|EFA70295.1| protein of unknown function DUF140 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 264

 Score =  220 bits (561), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 70/261 (26%), Positives = 124/261 (47%), Gaps = 6/261 (2%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   I K  +        +A  LG      G+      + K    + + Q+  VG   + 
Sbjct: 1   MSQTISKSSLGLWGQRLVEAIFLG------GQVTLHLLRGKIHRRNTLEQLAVVGPDSLF 54

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           + +L +   GAV   Q A +   FGA      ++++   RE+  +LTAV++AGR GSA  
Sbjct: 55  IALLTAIFVGAVFTIQVAREFINFGAGNLVGGVLAVALTRELSPVLTAVILAGRVGSAFA 114

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG+M++ E+IDA+  +  D +  L+ PR+ A ++ LP+LT+L+  + + G  I+    
Sbjct: 115 AEIGTMRVTEQIDALLMLKTDPIDFLVIPRLLACLLMLPILTLLSLVTGMWGGLIIATNL 174

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
           Y++   VF     +   L +I + +IKA      I I+    G      +  +G+  TT 
Sbjct: 175 YNLSDTVFLDSARNFLDLRDITSAMIKAACFGILIAIIGCSWGLTTTGGAKGVGQSTTTA 234

Query: 350 VVQSISIVIIIDSLFAIFYFA 370
           VV ++ ++ I +   +   F 
Sbjct: 235 VVTALLVIFISNFFLSWLMFQ 255


>gi|197122403|ref|YP_002134354.1| hypothetical protein AnaeK_1997 [Anaeromyxobacter sp. K]
 gi|196172252|gb|ACG73225.1| protein of unknown function DUF140 [Anaeromyxobacter sp. K]
          Length = 251

 Score =  220 bits (561), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 66/247 (26%), Positives = 115/247 (46%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
            ++         G +I   GE  A +++       ++ QM ++G     +V +     G 
Sbjct: 1   MLSRLRDAFEDFGRMILFAGEIVAWAFRPPFRPDQILAQMAFIGAGSAFIVGVTGTFAGM 60

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V   Q  + L QF AE ++    +    RE+  + TA+M+ GR+GSAI  E+G+M++ E+
Sbjct: 61  VFGLQMNYALRQFAAEGYTGGSTAFALARELSPVFTALMVTGRAGSAITTELGTMRVTEQ 120

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+ TM +  ++ L+ PR+ A I+  P+LT+L N     GA ++      IP   F   
Sbjct: 121 IDAMETMAVSPIQYLVVPRVVASILMFPVLTMLFNALGYGGAYVMGVFVSGIPEGPFIQH 180

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                   +IF GL KA      + ++    G+A    +  +G+  T  VV S   +++ 
Sbjct: 181 TREFLGPDDIFHGLGKAVLFGYIVAVITTWRGYAASGGARGVGEGTTRAVVASSVAILVA 240

Query: 361 DSLFAIF 367
           D    + 
Sbjct: 241 DYAGTVL 247


>gi|167587707|ref|ZP_02380095.1| hypothetical protein BuboB_20349 [Burkholderia ubonensis Bu]
          Length = 255

 Score =  220 bits (561), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 58/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +   A +   ++                   + +Q++++G     
Sbjct: 1   MISAIGRFVIGGLVRAGYGARMFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D ++ +I+PR+W  II++PLL  + N   ++G   V    
Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKTVIAPRMWGGIITMPLLAAIFNAVGVLGGYFVGVIL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+      +  ++  G++K+     A+  +A+ +G+        + +  T 
Sbjct: 174 IGVDSGAFWSQMQGGVQVWADVGNGVLKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255


>gi|295677863|ref|YP_003606387.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1002]
 gi|295437706|gb|ADG16876.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1002]
          Length = 255

 Score =  220 bits (561), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 61/262 (23%), Positives = 132/262 (50%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +         ++                   + +Q+++VG   + 
Sbjct: 1   MISTIGRSVITGLGTAGYATRFFLRLVLEIFPLLRRP-------RLVTKQIHFVGNYSLV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D V+++I+PR+WA IIS+P+L  + +   ++G  +V    
Sbjct: 114 AEIGLMKAGEQLTAMEMMAVDPVKVVIAPRLWAGIISMPILAAIFSAVGVLGGYVVGVLL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+  S   +  ++  G++K+     A+  VA+ +G+        + +  T 
Sbjct: 174 IGVDAGAFWSQMQSGVDVWRDVGAGVVKSVVFGLAVTFVALFQGYEAKPTPEGVSRATTR 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVYASLAVLGLDFLLTALMFS 255


>gi|195952560|ref|YP_002120850.1| protein of unknown function DUF140 [Hydrogenobaculum sp. Y04AAS1]
 gi|195932172|gb|ACG56872.1| protein of unknown function DUF140 [Hydrogenobaculum sp. Y04AAS1]
          Length = 327

 Score =  220 bits (561), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 105/350 (30%), Positives = 165/350 (47%), Gaps = 27/350 (7%)

Query: 24  ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFS 83
            + +   I+ SI      +D+  I ++DT GA  ++  +EKY  K +L G   HIE +  
Sbjct: 5   KETIEGKIDVSIFIKEHTIDIKDIEKLDTFGAIFVLELLEKYKDK-ELVGKKEHIEFIQK 63

Query: 84  LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFC 143
           +       K  N+K ++    N       +IG  +     +                   
Sbjct: 64  VKELL---KYNNEKTKKDSNINLSLTFLEYIGILVYHSFKNIKDI--------------- 105

Query: 144 ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203
                      S ++++   G+  + ++ ++SF+ G VIA Q A +L  FGA IF ++L+
Sbjct: 106 --------EFESFLKEVESSGIGSLFILAVLSFLVGIVIAYQSANELISFGANIFIVNLI 157

Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263
            I   RE+G L+T +++AGR  S   A IG   + EEIDAI  M +    +   PRI  L
Sbjct: 158 GISAFRELGPLITGIILAGRVSSGYTANIGIRNVYEEIDAIEVMSISPYVVFGLPRIITL 217

Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323
            +  PLL + ++   ++G +I+     DIPF +FF R         +F GL+KAPF    
Sbjct: 218 TLITPLLVLFSSNVMVLGGAIIANTSLDIPFDMFFDRLREVVGFNQVFVGLVKAPFFGAY 277

Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           IG+V    GF  G     +   V   VV SIS +I+ID+LF+I +  IGI
Sbjct: 278 IGLVGTYFGFYSGKKPEDVTLNVMKSVVISISGIIVIDALFSIIFAKIGI 327


>gi|118594041|ref|ZP_01551388.1| hypothetical protein MB2181_00195 [Methylophilales bacterium
           HTCC2181]
 gi|118439819|gb|EAV46446.1| hypothetical protein MB2181_00195 [Methylophilales bacterium
           HTCC2181]
          Length = 261

 Score =  220 bits (561), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 70/266 (26%), Positives = 132/266 (49%), Gaps = 8/266 (3%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
           N+  N    +G      +    +   +  L++  + +           +   IR++Y+ G
Sbjct: 2   NNMLNFIAGVGSSFRSKMTRLGAGTRLFFLILIYSVDSFKR-------IGLTIREIYFTG 54

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
           V  + ++I+ +F  G V+  QG + L ++G+      L+++  +RE+G ++TA++ AGR+
Sbjct: 55  VLSLVIIIVSAFFVGMVLGLQGYYTLEKYGSSEAIGVLVALALVRELGPVVTALLFAGRA 114

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           G+AI AEIG MK  E++ A+  M +  V  +I+PR WA +IS+P+L  + +   I+G   
Sbjct: 115 GTAITAEIGLMKATEQLSAMEVMAVSPVARIIAPRFWAGMISMPILATIFSMVGILGGYF 174

Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           +      +    F+S+  +    + +I  G IK+     A  I+A+ EGF     +  + 
Sbjct: 175 IAVLVIGVDEGAFWSQMQANVDFSNDIVDGAIKSIVFGFACTIIALFEGFDAPPTAEGVS 234

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYF 369
           +  T  VV S   V+ +D +   F F
Sbjct: 235 RATTRTVVISSLAVLGLDFILTSFMF 260


>gi|34495903|ref|NP_900118.1| ABC transporter permease [Chromobacterium violaceum ATCC 12472]
 gi|34101758|gb|AAQ58126.1| probable ABC transport system permease protein [Chromobacterium
           violaceum ATCC 12472]
          Length = 257

 Score =  220 bits (561), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 69/264 (26%), Positives = 131/264 (49%), Gaps = 8/264 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             +    +G   V  +      +  L  ++ N+G+           L   IR++Y+ GV 
Sbjct: 1   MTSPLRRLGHLTVNAVWRLGFASRFLAAILLNSGQSLLR-------LQMTIREIYFAGVM 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++++     G V+  QG   L++FG+      ++++  LRE+G +L A++ A R+GS
Sbjct: 54  SLIIIVVSGLFVGMVLGLQGYTTLAKFGSADALGAMVALALLRELGPVLAALLFASRAGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++DA+  M ++ +  +I+PR WA ++S+P+L  L N   I G  +V 
Sbjct: 114 AMTAEIGLMKTTEQLDAMSVMAVNPMARVIAPRFWAGVVSMPILAALFNVVGIFGGYLVG 173

Query: 287 WKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                +    F+S+      L  ++  G+IK+     A+ ++A+ EG+     +  +   
Sbjct: 174 VVMIGLDAGTFWSQMQGNVDLHYDVVNGIIKSLVFGIAVTLIAVFEGYDATPTAAGVSAA 233

Query: 346 VTTCVVQSISIVIIIDSLFAIFYF 369
            T  VV S  +++ +D +   F F
Sbjct: 234 TTRTVVTSALVILALDFVLTAFMF 257


>gi|114330858|ref|YP_747080.1| hypothetical protein Neut_0852 [Nitrosomonas eutropha C91]
 gi|114307872|gb|ABI59115.1| protein of unknown function DUF140 [Nitrosomonas eutropha C91]
          Length = 265

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 68/266 (25%), Positives = 128/266 (48%), Gaps = 8/266 (3%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
              + +   IG ++V  I       H + LV+  +                + R++YY G
Sbjct: 3   RRIRIVIESIGHRMVDSIWRLGCATHFMLLVLLKSVPGFLR-------FRLITREIYYAG 55

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
           V  + ++++     G V+  QG   L +FG+E     L+++  +RE+G ++ A++ A R+
Sbjct: 56  VMSLIIILVSGLFVGMVLGLQGYETLQKFGSESAVGTLVALSLVRELGPVIAALLFASRA 115

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           GSA+ AEIG MK  E++ A+  M +D +  +++PR W  + S+PLL  + +   + G  +
Sbjct: 116 GSAMTAEIGLMKATEQLAAMGMMAVDPIARIVAPRFWGGVFSMPLLAAMFSVMGVFGGYL 175

Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           V   +  +    F+S+  S+     +I  G+IK+ F    +  +A+ EGF     +  + 
Sbjct: 176 VTVIFIGVDEGSFWSQMQSSVDFRYDIVNGVIKSCFFGVVVTAIAVFEGFDAPPTAEGVS 235

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYF 369
              T  VV S   ++ +D +   F F
Sbjct: 236 GATTRTVVTSALAILGLDFVLTAFMF 261


>gi|171060067|ref|YP_001792416.1| hypothetical protein Lcho_3393 [Leptothrix cholodnii SP-6]
 gi|170777512|gb|ACB35651.1| protein of unknown function DUF140 [Leptothrix cholodnii SP-6]
          Length = 259

 Score =  220 bits (560), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 55/222 (24%), Positives = 113/222 (50%), Gaps = 1/222 (0%)

Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210
                +  Q++++G   + ++ +     G V+  QG + L ++G+      L+++  +RE
Sbjct: 38  RRWRLVFDQIHFLGNHSLAIIGVSGLFVGFVLGLQGYYTLQRYGSSEALGLLVALSLVRE 97

Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
           +G ++TA++ AGR+G+A+ AEIG MK  E++ A+  M +D ++ +++PR    ++++PLL
Sbjct: 98  LGPVVTALLFAGRAGTALTAEIGLMKSGEQLAAMEMMAVDPIQRVLAPRFIGGMVAMPLL 157

Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAM 329
             + +   IIG  +V      +    F+S+         +I  G+IK+   A  +  +A+
Sbjct: 158 AAVFSAVGIIGGWLVGVVMIGVDAGSFWSQMQGGVDVFKDIGNGVIKSVVFALIVTFIAL 217

Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
            +G+        + +  T  VV S   V+  D +     F+I
Sbjct: 218 LQGYECQPTPEGVARATTRTVVVSSLAVLAFDFVLTALMFSI 259


>gi|119511793|ref|ZP_01630895.1| hypothetical protein N9414_16364 [Nodularia spumigena CCY9414]
 gi|119463566|gb|EAW44501.1| hypothetical protein N9414_16364 [Nodularia spumigena CCY9414]
          Length = 257

 Score =  220 bits (560), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 62/237 (26%), Positives = 113/237 (47%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
             +   G+      + K +   +++ M   G + V  VIL+S   G +   Q A +L +F
Sbjct: 17  AAVLLFGQVLLHLLQGKTYYRKILQHMVTAGPASVSPVILVSGFAGMIFTIQTARELVRF 76

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           GA        ++   RE+  LLTA +IAG+ GSA  AEIG+M++ E+IDA+  +  + + 
Sbjct: 77  GALDAVGGAFALAFCRELAPLLTASIIAGQVGSAFAAEIGAMRVTEQIDALYMLKTNPID 136

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            L+ PR+ A I+ +P++ + A    I G      ++Y++    F     S   L+++F  
Sbjct: 137 YLVLPRVIACILMMPIMMVFALIVGISGGVFAASQFYNVDPEAFLESVRSFLQLSDLFMV 196

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           L+K       + I     G      +  +G+  TT VV +  ++ ++D   ++  F 
Sbjct: 197 LVKGLIFGAIVAINGCSWGLTTKGGAKEVGESATTAVVTTWVLIFMMDFFLSLLMFE 253


>gi|313896753|ref|ZP_07830301.1| putative membrane protein [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|320530066|ref|ZP_08031136.1| hypothetical protein HMPREF9555_01216 [Selenomonas artemidis F0399]
 gi|312974670|gb|EFR40137.1| putative membrane protein [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|320137499|gb|EFW29411.1| hypothetical protein HMPREF9555_01216 [Selenomonas artemidis F0399]
          Length = 255

 Score =  219 bits (559), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 72/254 (28%), Positives = 124/254 (48%), Gaps = 1/254 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        +    +G V    GE      + +  + S++ QM ++G   + +V L  
Sbjct: 3   RILEAVGAFVLTHLANIGRVTLLYGETMRQVTR-RLRVRSIVYQMSHLGADSLLIVGLTL 61

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
             TG V+  Q A +  ++GA+     +++I   RE+G +L  V+ AGR G+AI AE+ +M
Sbjct: 62  LFTGVVLTLQTAHEFIRYGAQSTIGAVIAISIGRELGPVLVGVVCAGRVGAAITAEVSTM 121

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K+ E+IDA+R M +  V  LI PR+ A +  +P+LT+  +   + G  +    Y  I   
Sbjct: 122 KVTEQIDALRVMAVSPVNYLIVPRMLACMCVVPILTVFGDVIGVFGGYLTAVHYSGISAY 181

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            F       AT+ ++  GLIKA F    I ++    G A    +  +GK     VV SI 
Sbjct: 182 TFTHSITQFATIYDLTGGLIKAIFFGNVIAVLGCHYGLAAPNGAEGVGKATMQTVVTSII 241

Query: 356 IVIIIDSLFAIFYF 369
           ++ I++++   F F
Sbjct: 242 VIFILNAVLTFFLF 255


>gi|220905696|ref|YP_002481007.1| hypothetical protein Cyan7425_0250 [Cyanothece sp. PCC 7425]
 gi|219862307|gb|ACL42646.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7425]
          Length = 248

 Score =  219 bits (559), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 68/236 (28%), Positives = 114/236 (48%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
                 G+        +    + + QM  VG   + V ++ +   G V   Q A +   F
Sbjct: 3   AAFLLGGQVFVHLLMGRINRRNTLEQMSVVGPESLLVALITATFVGMVFTIQVAREFINF 62

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           GA      +++I   RE+  +LTAV++AGR GSA  AEIG+M++ E+IDA+  +  D V 
Sbjct: 63  GAVSAVGGVLAIALTRELAPVLTAVILAGRVGSAFAAEIGTMRVTEQIDALYLLSTDPVD 122

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            L+ PR  A  + LP+LT+LA  +A+ G  ++    Y IPF++F     S   L +I++ 
Sbjct: 123 YLVLPRFLACCLMLPVLTLLALVTAMGGGMLLAESLYGIPFSLFLDSAKSFLELWDIWSA 182

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           ++K+      + I+    G      +  +G+  T  VV S+  + I D   +   F
Sbjct: 183 VLKSIVFGALVAIIGCNWGLTTSGGAKGVGQSTTAAVVISLLSIFIADFFLSWVMF 238


>gi|294056022|ref|YP_003549680.1| protein of unknown function DUF140 [Coraliomargarita akajimensis
           DSM 45221]
 gi|293615355|gb|ADE55510.1| protein of unknown function DUF140 [Coraliomargarita akajimensis
           DSM 45221]
          Length = 258

 Score =  219 bits (559), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 65/256 (25%), Positives = 122/256 (47%), Gaps = 5/256 (1%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I K    + +  H  G +   +G   +   + +     L+  ++ +GV  VP+V+++   
Sbjct: 2   IRKLGQSALATVHEFGEMTVFSGMALSGFIQQRRRSQKLLSAIFEIGVRCVPIVLVVGLF 61

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  Q  + L + GAE    D + +  +RE+G +LTA+M+ G++GSA+ +E+G  + 
Sbjct: 62  AGLVMGLQLYYTLVRLGAEAALGDAIGLSLVRELGPVLTALMVVGQAGSALASELGIQRN 121

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
           +E+IDA++TMG++    L+ PR+WA +I  P+LT L +   I G  +       +   V+
Sbjct: 122 DEQIDALQTMGIEPRGYLVGPRLWAALICFPMLTALFDLIGIYGGYLTGSVLLHVDSGVY 181

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG-----VHSNSLGKKVTTCVVQ 352
           ++  + +    +++ G IKA         +    G+             + +  T  VV 
Sbjct: 182 WTHVYKSVQWDDVWGGFIKALVFGLLTISICSYRGYYTHLKSSFRGVRGVSQSATRAVVY 241

Query: 353 SISIVIIIDSLFAIFY 368
           S   V+  D L   F 
Sbjct: 242 SSVAVLAADYLITSFL 257


>gi|218782260|ref|YP_002433578.1| hypothetical protein Dalk_4431 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218763644|gb|ACL06110.1| protein of unknown function DUF140 [Desulfatibacillum alkenivorans
           AK-01]
          Length = 268

 Score =  219 bits (559), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 74/272 (27%), Positives = 127/272 (46%), Gaps = 12/272 (4%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
           S F           G+K + F+ +       L              +      + ++ Q+
Sbjct: 2   SVFAGVVVEPVSATGRKTIAFVQEMGRMFIFL-------MHSVLHMFTLPFQFVKILTQI 54

Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
             +G   + VV LI   TG V+  Q    L+ FG+E      +    ++E+G +L A+M+
Sbjct: 55  NIIGAQSLYVVSLIGLFTGMVLGLQLYNALANFGSEGMLGTSIVHTLIKEMGPVLAAIMV 114

Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280
             R+GSA+ AEIG M+I+EEIDA+ TM ++ +R L+SPR+ A IIS PLLT L +  A+ 
Sbjct: 115 TARAGSAMAAEIGIMRISEEIDALDTMQINPIRFLVSPRLAAAIISFPLLTALFDVIALF 174

Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV----- 335
           G  +   K   +  A ++    ++  + +I  G +KA   A  +  V   +G+       
Sbjct: 175 GGYLTGCKLKGLNDATYWYTVENSLVMEDINGGFLKAIVFAVIVITVCCYQGYTTHMRPN 234

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           G  +  +    T+ VV S  ++++ D +   F
Sbjct: 235 GFGAKGVSASTTSAVVMSCVLILMADFVLTAF 266


>gi|163784036|ref|ZP_02178993.1| hypothetical protein HG1285_11198 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880693|gb|EDP74240.1| hypothetical protein HG1285_11198 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 248

 Score =  219 bits (559), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 67/236 (28%), Positives = 117/236 (49%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G +     E     +     +  +I+Q+  +G    P++I+  F TG V+  +      
Sbjct: 11  IGSITLLFLETLKFVFIKPPKIKHIIKQIAVIGADAAPLIIITGFFTGGVLVVETYPTFH 70

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           +F AE     L+S+   RE+  +L A+++  RSGSA+ A IG+M+I E+IDA+  + ++ 
Sbjct: 71  KFNAEFLIGALVSLSLSRELSPVLVALLVTARSGSAMAANIGTMRITEQIDALEVLAVNP 130

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           VR LI+PRI A +  +P LTIL+  S I G   V  + Y +   +F  +        +I 
Sbjct: 131 VRYLIAPRIIASVFVVPSLTILSIASGIAGGYFVATELYSVNSFMFIEKMKDLTEFYDIL 190

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            G+ K+      + IV+   G+     +  +G+  TT VV S  +++I+D      
Sbjct: 191 GGIYKSIAFGVLLTIVSCYFGYVAKGGAEGVGRATTTAVVTSSVLILIVDYFLTAL 246


>gi|88811866|ref|ZP_01127119.1| hypothetical protein NB231_05736 [Nitrococcus mobilis Nb-231]
 gi|88790750|gb|EAR21864.1| hypothetical protein NB231_05736 [Nitrococcus mobilis Nb-231]
          Length = 258

 Score =  219 bits (559), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 62/250 (24%), Positives = 113/250 (45%), Gaps = 1/250 (0%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           F   + +    LG                      +I Q+Y  GV  + ++++     G 
Sbjct: 8   FGEQTLAATARLGRGYLFLLRVLLGLPGLLLRPGLVITQIYATGVLSLLIIVVSGLFVGM 67

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+  QG   L  FGAE     L+++   RE+G +++A++ +GR+GSA+ AEIG MK  E+
Sbjct: 68  VLGLQGYNTLVNFGAEQSLGVLVALSLTRELGPVVSALLFSGRAGSALTAEIGLMKATEQ 127

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +  +  M +D  R +++PR+   +I+LPLL  +     + G   V      +    ++S+
Sbjct: 128 LSGMEMMAVDPERRVVAPRLLGGMIALPLLAAIFTLVGVFGGYFVGTVLLGVDSGAYWSQ 187

Query: 301 FHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
             +  +   ++  G+IK+      +   A+ EGF     S  + +  T  VV S   V+ 
Sbjct: 188 MQAQVSFTDDVVNGVIKSLVFGFVVSWTAVFEGFDCAPTSEGVSRATTRAVVHSSLAVLG 247

Query: 360 IDSLFAIFYF 369
           +D +     F
Sbjct: 248 LDFILTALMF 257


>gi|255319835|ref|ZP_05361040.1| toluene tolerance efflux transporter [Acinetobacter radioresistens
           SK82]
 gi|262380367|ref|ZP_06073521.1| toluene tolerance efflux transporter [Acinetobacter radioresistens
           SH164]
 gi|255303154|gb|EET82366.1| toluene tolerance efflux transporter [Acinetobacter radioresistens
           SK82]
 gi|262297813|gb|EEY85728.1| toluene tolerance efflux transporter [Acinetobacter radioresistens
           SH164]
          Length = 258

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 69/263 (26%), Positives = 129/263 (49%), Gaps = 9/263 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G+ +++ +        +L  +I +   +          +   I QMY VGV  +
Sbjct: 2   NAVAWLGRLVIERVRGIGVATLMLLQIIFSLPTWLG--------VKLFIYQMYRVGVMSL 53

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG   L   G+E     ++++  LRE+  ++ A++ AGR+GSA+
Sbjct: 54  LIITVSGLFIGLVLGLQGYSILVNVGSEAMLGTMVALTLLRELAPVVAALLFAGRAGSAL 113

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG MK  E++ ++  +G+D ++ ++SPR+WA I+SLP+LT++     I+G  +V   
Sbjct: 114 TAEIGLMKATEQLSSMEMIGVDPLKRIVSPRLWAGIVSLPMLTVIFGAVGILGGKLVGVD 173

Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +    F+S   S+     ++  G+IK+   A     +A+ +G+A    S  +    T
Sbjct: 174 FLGVDEGSFWSGMQSSVQFGHDVVNGIIKSTVFALICTWIAVYQGYACEPTSEGIATSTT 233

Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370
             VV S   V+  D +     F 
Sbjct: 234 RTVVFSSLCVLGFDFVLTAVMFG 256


>gi|225871870|ref|YP_002753324.1| transporter, putative ER-chloroplast lipid translocase (ECLT)
           family [Acidobacterium capsulatum ATCC 51196]
 gi|225792942|gb|ACO33032.1| transporter, putative ER-chloroplast lipid translocase (ECLT)
           family [Acidobacterium capsulatum ATCC 51196]
          Length = 259

 Score =  219 bits (558), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 64/233 (27%), Positives = 120/233 (51%)

Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198
           T     + ++   +   ++ Q  Y+G+  +P+VIL  F TG V+A   A  L+QFGA   
Sbjct: 24  TTRALLNLFRRPFYWSDIVFQADYIGIGSLPIVILTGFFTGGVLALNSASTLAQFGATAV 83

Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258
           +  L+S+  ++E+G +LT++M++GR+ S + +E+GSM + E++DA+R +G D ++ L+ P
Sbjct: 84  TGQLVSLSMIKELGPVLTSLMVSGRNASGMASELGSMIVTEQVDAMRALGTDPMKKLVMP 143

Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318
           RI A +  +  LTI+++    +G + V         + +F   +      ++F GLIK  
Sbjct: 144 RIVATVCMMFFLTIVSDAIGTLGGAFVSGILLGQNTSQYFHTAYQALRYPDVFEGLIKPV 203

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
                I  +    G      +  +G+  T  VV +  ++I  D   +    +I
Sbjct: 204 IFGFIIATIGCFYGMKTRGGTQGVGRSTTQAVVVASVLIIATDFFISQIVISI 256


>gi|163854451|ref|YP_001628749.1| hypothetical protein Bpet0147 [Bordetella petrii DSM 12804]
 gi|163258179|emb|CAP40478.1| putative membrane protein [Bordetella petrii]
          Length = 259

 Score =  219 bits (558), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 61/258 (23%), Positives = 131/258 (50%), Gaps = 8/258 (3%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           +G  +   ++        LG +++ +G   +           + +Q++++G   + ++I+
Sbjct: 8   LGGWVRAQVSGVGFFTRFLGALLARSGIAVSRP-------RLVSQQVHFIGNYSLLIIIV 60

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
                G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ AEIG
Sbjct: 61  SGMFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIG 120

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
            MK  E++ A+  M +D +R ++ PR+W  II++P+L  + +   I+G  +V      + 
Sbjct: 121 LMKAGEQLAAMEVMAVDPMRRVLVPRLWGGIIAMPVLAAVFSMVGILGGWVVGVLLIGVD 180

Query: 294 FAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
              F+S+  S   +  ++  G++K+      + +VA+ EG+        + +  T  VV 
Sbjct: 181 AGAFWSQMQSGVDVWDDVANGVLKSLVFGVTVTLVALYEGWQARPTPEGVARATTRTVVV 240

Query: 353 SISIVIIIDSLFAIFYFA 370
               V+ +D L     F 
Sbjct: 241 GSLAVLGLDFLLTALMFG 258


>gi|158337358|ref|YP_001518533.1| hypothetical protein AM1_4236 [Acaryochloris marina MBIC11017]
 gi|158307599|gb|ABW29216.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
          Length = 249

 Score =  219 bits (558), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 70/237 (29%), Positives = 116/237 (48%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
             I   G+      + K    + I QM  VG   + V +L +   G V   Q A +   F
Sbjct: 3   AAIFLGGQVVVHLLRGKIHRRNTIEQMAIVGPESLLVALLTASFVGMVFTIQVAREFIAF 62

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           G       ++++   RE+  +LTAV+I GR  SA  AEIG+M++ E+IDA++ +  D V 
Sbjct: 63  GLVQTVGGVLALALTRELAPVLTAVIITGRVCSAFAAEIGTMRVTEQIDALQMLDTDPVD 122

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            L+ PR+ A  + LP+LT+++  + + G  +V    YDIP++VF    HS   + +I+  
Sbjct: 123 YLVVPRLLACTLMLPILTLISLVAGVTGGMVVASVLYDIPYSVFLDSVHSFLGVWDIWNS 182

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +IKA      I IV    G      +  +G+  T  VV ++ +V + +   +   F 
Sbjct: 183 MIKAAIFGGIIAIVGSSWGLTTYGGAKGVGQSTTAAVVTALVMVFMTNFFLSWVMFQ 239


>gi|291613160|ref|YP_003523317.1| hypothetical protein Slit_0691 [Sideroxydans lithotrophicus ES-1]
 gi|291583272|gb|ADE10930.1| protein of unknown function DUF140 [Sideroxydans lithotrophicus
           ES-1]
          Length = 262

 Score =  219 bits (558), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 67/266 (25%), Positives = 132/266 (49%), Gaps = 8/266 (3%)

Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
           +  +    IGK++V  I  +   A    + +  +G                +R++++ GV
Sbjct: 2   AIVSGLRGIGKRVVNAIWRTGYGARFFLMTLLYSGMSFKR-------FRLTVREIFFSGV 54

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             + ++++     G V+  QG   L ++G+E     L+++  +RE+G +L A++ A R+G
Sbjct: 55  MSLIIILVAGMFVGMVLGLQGYETLKRYGSESALGSLVALSLVRELGPVLAALLFASRAG 114

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           SA+ AEIG MK  E+I A+  M ++ +  +++PR WA +IS+PLL  L +   + G  +V
Sbjct: 115 SAMTAEIGLMKATEQISAMELMAVNPIARVVAPRFWAGVISMPLLAALFSAMGVFGGYVV 174

Query: 286 IWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
                 +    F+S+  ++     +I  G+IK+     A+  +A+ EG+     +  +  
Sbjct: 175 GVVNIGVDEGSFWSQMQASVDFQHDILNGVIKSLVFGLAVTAIALFEGYDAPPTAEGVSG 234

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370
             T  VV+S   ++++D +   F F 
Sbjct: 235 ATTRTVVESSLAILMLDFILTAFMFQ 260


>gi|293610802|ref|ZP_06693102.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827146|gb|EFF85511.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325123627|gb|ADY83150.1| toluene tolerance efflux transporter (ABC superfamily, membrane)
           [Acinetobacter calcoaceticus PHEA-2]
          Length = 258

 Score =  219 bits (558), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 70/263 (26%), Positives = 131/263 (49%), Gaps = 9/263 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G+ +++ I      A +L  ++         S+   G     I QM+ VGV  +
Sbjct: 2   NTIAWLGRLVIERIRGIGVAALMLLQIVF--------SFPSSGGFGRFIYQMHRVGVMSL 53

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG   L   G+E     ++S+  LRE+  ++ A++ AGR+GSA+
Sbjct: 54  LIITVSGLFIGLVLGLQGYSILVNVGSESMLGTMVSLTLLRELAPVVAALLFAGRAGSAL 113

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIGSMK +E++ ++  +G+D ++ ++SPR+WA ++SLP+LT++     I+G  +V   
Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGVVSLPMLTVIFAAIGIVGGKMVGVD 173

Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +    F+S   +      ++  G+IK+   A     +A+ +G+A       +   +T
Sbjct: 174 FLGVDEGSFWSGMQNNVQFGHDVVNGIIKSIVFALLCTWIAVYQGYACDPTPEGIATAMT 233

Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370
             VV S   V+  D +     F 
Sbjct: 234 RTVVYSSLCVLGFDFVLTAVMFG 256


>gi|294788757|ref|ZP_06753998.1| putative membrane protein [Simonsiella muelleri ATCC 29453]
 gi|294483239|gb|EFG30925.1| putative membrane protein [Simonsiella muelleri ATCC 29453]
          Length = 258

 Score =  219 bits (558), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 75/263 (28%), Positives = 135/263 (51%), Gaps = 8/263 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N   +IG K + FI    +    L  ++S   +              +IRQMY+ GV  +
Sbjct: 2   NFIQNIGSKTLTFIQILGANTLFLLKILSLLPQNILRP-------RLMIRQMYFSGVLSI 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG  QL++F A      +++   LRE+G +L A++ A  SG A+
Sbjct: 55  LIIAVSGLFVGMVLGLQGYTQLAKFKAADVLGFMVAAALLRELGPVLAAILFASSSGGAM 114

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            +EIG MK  E+++A+  M ++ V  +++PR WA ++S+PLL  + N + I G  +V  +
Sbjct: 115 TSEIGLMKTTEQLEAMNVMAINPVARVVAPRFWAGVVSMPLLASIFNVAGIWGGYLVGVQ 174

Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +   VF+S   ++ T + ++  GLIK+     A+ ++A+ +GF     +  + +  T
Sbjct: 175 WLGLDSGVFWSHMQNSMTFSYDVLNGLIKSMIFGTAVSLIAVYQGFHCRPTAEGILRAST 234

Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370
             VV S   V+ +D +   F FA
Sbjct: 235 RTVVSSALTVLALDFILTAFMFA 257


>gi|53720756|ref|YP_109742.1| hypothetical protein BPSL3149 [Burkholderia pseudomallei K96243]
 gi|53724275|ref|YP_104245.1| ABC transporter permease [Burkholderia mallei ATCC 23344]
 gi|67641604|ref|ZP_00440380.1| ABC transporter, permease protein [Burkholderia mallei GB8 horse 4]
 gi|76810397|ref|YP_335067.1| ABC transporter permease [Burkholderia pseudomallei 1710b]
 gi|83719902|ref|YP_443507.1| ABC transporter permease [Burkholderia thailandensis E264]
 gi|121601502|ref|YP_994512.1| ABC transporter, permease protein [Burkholderia mallei SAVP1]
 gi|124386292|ref|YP_001027757.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10229]
 gi|126441452|ref|YP_001060680.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 668]
 gi|126450665|ref|YP_001082296.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10247]
 gi|126451565|ref|YP_001067964.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 1106a]
 gi|134283213|ref|ZP_01769914.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 305]
 gi|167002607|ref|ZP_02268397.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           mallei PRL-20]
 gi|167582553|ref|ZP_02375427.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           thailandensis TXDOH]
 gi|167721498|ref|ZP_02404734.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei DM98]
 gi|167740468|ref|ZP_02413242.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 14]
 gi|167817681|ref|ZP_02449361.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 91]
 gi|167826076|ref|ZP_02457547.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 9]
 gi|167847585|ref|ZP_02473093.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei B7210]
 gi|167896161|ref|ZP_02483563.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 7894]
 gi|167904546|ref|ZP_02491751.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei NCTC 13177]
 gi|167912808|ref|ZP_02499899.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 112]
 gi|167920767|ref|ZP_02507858.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei BCC215]
 gi|217424760|ref|ZP_03456257.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 576]
 gi|226198280|ref|ZP_03793851.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|237814076|ref|YP_002898527.1| ABC transporter, permease protein [Burkholderia pseudomallei
           MSHR346]
 gi|242317944|ref|ZP_04816960.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 1106b]
 gi|254175241|ref|ZP_04881902.1| ABC transporter, permease protein [Burkholderia mallei ATCC 10399]
 gi|254180406|ref|ZP_04887004.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 1655]
 gi|254190369|ref|ZP_04896877.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254198428|ref|ZP_04904849.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei S13]
 gi|254201319|ref|ZP_04907683.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           mallei FMH]
 gi|254206661|ref|ZP_04913012.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           mallei JHU]
 gi|254258882|ref|ZP_04949936.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 1710a]
 gi|254300642|ref|ZP_04968087.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 406e]
 gi|254357286|ref|ZP_04973560.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           mallei 2002721280]
 gi|257137708|ref|ZP_05585970.1| ABC transporter, permease protein [Burkholderia thailandensis E264]
 gi|52211170|emb|CAH37159.1| putative membrane protein [Burkholderia pseudomallei K96243]
 gi|52427698|gb|AAU48291.1| ABC transporter, permease protein [Burkholderia mallei ATCC 23344]
 gi|76579850|gb|ABA49325.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710b]
 gi|83653727|gb|ABC37790.1| ABC transporter, permease protein [Burkholderia thailandensis E264]
 gi|121230312|gb|ABM52830.1| ABC transporter, permease protein [Burkholderia mallei SAVP1]
 gi|124294312|gb|ABN03581.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10229]
 gi|126220945|gb|ABN84451.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 668]
 gi|126225207|gb|ABN88747.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 1106a]
 gi|126243535|gb|ABO06628.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10247]
 gi|134245408|gb|EBA45501.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 305]
 gi|147747213|gb|EDK54289.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           mallei FMH]
 gi|147752203|gb|EDK59269.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           mallei JHU]
 gi|148026350|gb|EDK84435.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           mallei 2002721280]
 gi|157810484|gb|EDO87654.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 406e]
 gi|157938045|gb|EDO93715.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|160696286|gb|EDP86256.1| ABC transporter, permease protein [Burkholderia mallei ATCC 10399]
 gi|169655168|gb|EDS87861.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei S13]
 gi|184210945|gb|EDU07988.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 1655]
 gi|217392216|gb|EEC32241.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 576]
 gi|225929800|gb|EEH25816.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|237505137|gb|ACQ97455.1| ABC transporter, permease protein [Burkholderia pseudomallei
           MSHR346]
 gi|238522557|gb|EEP86001.1| ABC transporter, permease protein [Burkholderia mallei GB8 horse 4]
 gi|242141183|gb|EES27585.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 1106b]
 gi|243061712|gb|EES43898.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           mallei PRL-20]
 gi|254217571|gb|EET06955.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 1710a]
          Length = 255

 Score =  218 bits (557), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 57/262 (21%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +     +   V+                   + +Q++++G     
Sbjct: 1   MISAIGRFVIGGLERTGYATRMFVRVVLEFFSLLRRP-------RLVTKQIHFLGNYSFV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G +++A++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVSALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D ++ +I+PR+WA +I++PLL  + +   ++G  +V    
Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPLKNVIAPRMWAGVIAMPLLAAIFSAVGVLGGYVVGVLL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+      +  ++  G+IK+     A+  +A+ +G+        +    T 
Sbjct: 174 IGVDPGAFWSQMQGGVEVWADVGNGVIKSVVFGFAVTFIALFQGYEAKPTPEGVSHATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVYASLAVLGLDFLLTALMFS 255


>gi|315122740|ref|YP_004063229.1| ABC transporter [Candidatus Liberibacter solanacearum CLso-ZC1]
 gi|313496142|gb|ADR52741.1| ABC transporter [Candidatus Liberibacter solanacearum CLso-ZC1]
          Length = 211

 Score =  218 bits (557), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 184/211 (87%), Positives = 206/211 (97%)

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           +GV+GVPV+ILISFVTGAVIAQQGAFQLS FGAEIF+IDLMSILQLREIGVLLTAVM+AG
Sbjct: 1   MGVTGVPVIILISFVTGAVIAQQGAFQLSNFGAEIFAIDLMSILQLREIGVLLTAVMVAG 60

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           RSGSAIVAEIGSMKINEEID+++T+G+D VR+LISPRIWALIISLPLLTILAN+SAI+GA
Sbjct: 61  RSGSAIVAEIGSMKINEEIDSLKTIGIDLVRVLISPRIWALIISLPLLTILANYSAIVGA 120

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
           SI++WKYYDIPF+VFF+RFHSTATL N+FTGLIKAPFMACAIGIVAMKEGF VG +S+SL
Sbjct: 121 SIIVWKYYDIPFSVFFARFHSTATLGNVFTGLIKAPFMACAIGIVAMKEGFGVGTNSDSL 180

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           GK+VTTCVVQSIS+VIIIDSLFAIFYFAIGI
Sbjct: 181 GKRVTTCVVQSISMVIIIDSLFAIFYFAIGI 211


>gi|170077985|ref|YP_001734623.1| hypothetical protein SYNPCC7002_A1371 [Synechococcus sp. PCC 7002]
 gi|169885654|gb|ACA99367.1| conserved hypothetical protein TIGR00056 [Synechococcus sp. PCC
           7002]
          Length = 264

 Score =  218 bits (557), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 66/239 (27%), Positives = 112/239 (46%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           L       G+      + +      I QM  VG   + + ++ +   G V   Q A +  
Sbjct: 18  LVAATLLGGQVIVHLLRGRFNRRITIEQMAAVGPDSLLIALVTAGFVGMVFTIQVAREFI 77

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            FGA      ++ +   RE+  +LTAV++AGR GSA  AEIG+M++ E+IDA+  +  D 
Sbjct: 78  YFGAGTAVGGVLGLSLSRELAPVLTAVVLAGRVGSAFAAEIGTMRVTEQIDALHILRTDP 137

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           +  L+ PR  A  + LPLLT+L+  + + G  I+    Y IP ++F +   S     +I 
Sbjct: 138 IDYLVVPRFLACCLMLPLLTVLSLLTGMAGGLIIAINLYQIPQSIFINSAQSFLEYWDII 197

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           + +IK+      I ++    G      +  +G+  TT VV S+  + I +   +   F 
Sbjct: 198 SAMIKSVVFGGLIAVIGCSWGLTTTGGAKGVGQSTTTAVVTSLLAIFIANFFLSWLMFQ 256


>gi|94312189|ref|YP_585399.1| hypothetical protein Rmet_3258 [Cupriavidus metallidurans CH34]
 gi|93356041|gb|ABF10130.1| toluene transporter subunit: membrane component of ABC superfamily
           [Cupriavidus metallidurans CH34]
          Length = 258

 Score =  218 bits (557), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 57/263 (21%), Positives = 129/263 (49%), Gaps = 8/263 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
                IG  + +F+        +   +++ +                +  Q+++VG   +
Sbjct: 3   GFFTSIGSTVRQFVGGLGHATRMFLTMLALSPALLRR-------FRLVTDQVFFVGNLSL 55

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG + L++FG+E     L+++  +RE+G ++ A++ AGR+G+++
Sbjct: 56  VIIAVSGLFVGFVLGLQGYYTLNRFGSEQALGLLVALSLVRELGPVVAALLFAGRAGTSL 115

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG MK  E++ A+  M ++ ++ +I+PR WA +I++P+L  + +   ++G  +V  +
Sbjct: 116 TAEIGLMKAGEQLSAMEMMAVNPLQRVIAPRFWAGVIAMPVLATIFSALGVLGGYLVGVQ 175

Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
              +    F+S+  +   +  ++  G+IK+      +  +A+ +GF        + +  T
Sbjct: 176 LIGVDAGAFWSQMQNGVDVRADVLNGVIKSFIFGITVTFIALYQGFEAKPTPEGVSRATT 235

Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370
             VV +   V+ +D L     F+
Sbjct: 236 RTVVLASLAVLGLDFLLTALMFS 258


>gi|262280246|ref|ZP_06058030.1| toluene tolerance efflux transporter [Acinetobacter calcoaceticus
           RUH2202]
 gi|262258024|gb|EEY76758.1| toluene tolerance efflux transporter [Acinetobacter calcoaceticus
           RUH2202]
          Length = 258

 Score =  218 bits (557), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 70/263 (26%), Positives = 131/263 (49%), Gaps = 9/263 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G+ +++ I      A +L  ++         S+   G     I QM+ VGV  +
Sbjct: 2   NAIAWLGRLVIERIRGIGVAALMLVQIVF--------SFPTTGGFGRFIYQMHRVGVMSL 53

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG   L   G+E     ++S+  LRE+  ++ A++ AGR+GSA+
Sbjct: 54  LIITVSGLFIGLVLGLQGYSILVNIGSESMLGTMVSLTLLRELAPVVAALLFAGRAGSAL 113

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIGSMK +E++ ++  +G+D ++ ++SPR+WA ++SLP+LT++     I+G  +V   
Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGVVSLPMLTVIFAAIGIVGGKMVGVD 173

Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +    F+S   +      ++  G+IK+   A     +A+ +G+A       +   +T
Sbjct: 174 FLGVDEGSFWSGMQNNVQFGHDVVNGIIKSIVFALLCTWIAVYQGYACDPTPEGIATAMT 233

Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370
             VV S   V+  D +     F 
Sbjct: 234 RTVVYSSLCVLGFDFVLTAVMFG 256


>gi|269797585|ref|YP_003311485.1| hypothetical protein Vpar_0522 [Veillonella parvula DSM 2008]
 gi|282850033|ref|ZP_06259415.1| conserved hypothetical protein [Veillonella parvula ATCC 17745]
 gi|269094214|gb|ACZ24205.1| protein of unknown function DUF140 [Veillonella parvula DSM 2008]
 gi|282580222|gb|EFB85623.1| conserved hypothetical protein [Veillonella parvula ATCC 17745]
          Length = 253

 Score =  218 bits (557), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 71/260 (27%), Positives = 125/260 (48%), Gaps = 9/260 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
               IG+ ++  ++   S   ++   I                L  + +QM ++GV  +P
Sbjct: 3   WLESIGRVVINGLSQMGSATLLVWQTIKQLKMI---------NLWHVFQQMAHLGVDSLP 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ L     GAV+  Q    L  +GA+     LM++   RE+G +L  V++AGR G+AI 
Sbjct: 54  IISLTLLFAGAVMTLQITDVLITYGAQSTVGGLMAVAMGRELGPILVGVVLAGRVGAAIT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG+MK+ E+IDA+R M +D V  L+ PR+ A +I +P+L        I G   V    
Sbjct: 114 AEIGTMKVTEQIDALRVMAVDPVGYLVVPRVVACMIMVPILAFYGVVIGIAGGYFVATVI 173

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
             +  + +       +T+++   GLIK+      I +V   +G    + + ++G   T+ 
Sbjct: 174 KGLAPSTYLDSIQMFSTISDFTLGLIKSSVFGAVIALVGAYKGMETKMGAEAVGFSTTSS 233

Query: 350 VVQSISIVIIIDSLFAIFYF 369
           VV SI +V +++   +   F
Sbjct: 234 VVTSIILVFVLNYFLSTLLF 253


>gi|238918531|ref|YP_002932045.1| hypothetical protein NT01EI_0581 [Edwardsiella ictaluri 93-146]
 gi|238868099|gb|ACR67810.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 235

 Score =  218 bits (557), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 67/233 (28%), Positives = 116/233 (49%), Gaps = 1/233 (0%)

Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198
                    +       L RQ+Y VGV  + ++I+     G V+  QG   L+ + AE  
Sbjct: 2   LFSALVGRPEPGKQWPLLRRQLYSVGVQSLLIIIVSGLFIGMVLGLQGYLVLTTYSAEAS 61

Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258
              ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +++P
Sbjct: 62  LGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVVAP 121

Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKA 317
           R WA +IS+PLLT++     I G S+V   +  I    F+S          ++   LIK+
Sbjct: 122 RFWAGVISMPLLTVIFVAVGIWGGSVVGVDWKGIDAGFFWSAMQGAVDYRTDLLNCLIKS 181

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
              A  +  +A+  G+     S  + +  T  VV +   V+ +D +     F 
Sbjct: 182 LIFAITVMWIALFNGYDAVPTSAGISRATTRTVVHASLAVLGLDFVLTALMFG 234


>gi|294677110|ref|YP_003577725.1| ABC transporter permease [Rhodobacter capsulatus SB 1003]
 gi|294475930|gb|ADE85318.1| ABC transporter, permease protein [Rhodobacter capsulatus SB 1003]
          Length = 259

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 58/254 (22%), Positives = 119/254 (46%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +        +     G +   TG   +   +   +    ++ +  +G   +PVV + +F
Sbjct: 5   ALAGLGRTVLAALAGAGRISLFTGAVLSHMLRPPFYSREFLQALLQIGWLSLPVVGMTAF 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
            TGA +A Q     ++F AE     +++I  +RE+G +L  +M+A R  S+I AEIG+MK
Sbjct: 65  FTGAALALQIYAGGARFSAESVVPSIVAIGMVRELGPVLGGLMVAARVASSIAAEIGTMK 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           + E+IDA+ T+  + ++ L  PR+ A  +S+PLL  + +   ++G  ++  +      A 
Sbjct: 125 VTEQIDALVTLSTNPLKYLAVPRVLAATLSVPLLVAVGDVIGVLGGWLIGTERLGFNSAT 184

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +         L ++ +GL+K       + ++    G   G  +  +G+   + VV +   
Sbjct: 185 YIRNTWEYLELWDVGSGLVKGAAFGFLVALMGCYYGMNSGRGAQGVGRATKSAVVAASVA 244

Query: 357 VIIIDSLFAIFYFA 370
           ++  + L    +F+
Sbjct: 245 ILASNYLLTEVFFS 258


>gi|120609708|ref|YP_969386.1| hypothetical protein Aave_1014 [Acidovorax citrulli AAC00-1]
 gi|326315802|ref|YP_004233474.1| hypothetical protein Acav_0985 [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|120588172|gb|ABM31612.1| protein of unknown function DUF140 [Acidovorax citrulli AAC00-1]
 gi|323372638|gb|ADX44907.1| protein of unknown function DUF140 [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 260

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 58/260 (22%), Positives = 125/260 (48%), Gaps = 8/260 (3%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172
            +G      + D    A +   +    G         +        Q++++G   + ++ 
Sbjct: 8   DVGFATRSLLADMGRAARLFVRLAGLIGPTLQRFGLVR-------DQLHFLGNYSLSIIS 60

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
           +     G V+  QG + L ++G+      L+++  +RE+G +++A++ AGR+G+++ AEI
Sbjct: 61  VSGLFVGFVLGLQGYYTLQRYGSAQALGLLVALSLVRELGPVVSALLFAGRAGTSLTAEI 120

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           G M+  E++ A+  M +D VR +++PR WA +I++PLL  + +   +IG  IV      +
Sbjct: 121 GLMRAGEQLSAMEMMAVDPVRRILAPRFWAGVIAMPLLAAVFSAVGVIGGWIVGVVMLGV 180

Query: 293 PFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
               F+ +  S   +  ++  G++K+      +  +A+ +G+        + +  T  VV
Sbjct: 181 DGGAFWGQMQSGVDVWADVGNGVLKSFVFGVTVTFIALLQGYIAKPTPEGVSRATTRTVV 240

Query: 352 QSISIVIIIDSLFAIFYFAI 371
            +   V+ +D L   + F+I
Sbjct: 241 MASLTVLGLDFLLTAWMFSI 260


>gi|254442342|ref|ZP_05055818.1| conserved hypothetical protein [Verrucomicrobiae bacterium DG1235]
 gi|198256650|gb|EDY80958.1| conserved hypothetical protein [Verrucomicrobiae bacterium DG1235]
          Length = 260

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 70/266 (26%), Positives = 132/266 (49%), Gaps = 12/266 (4%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG++ ++ +++       LG +   + +   +  K +     L R ++ +GV  VP
Sbjct: 1   MISKIGRQSIRLVSE-------LGELAGFSAQASVALPKQRHIFEKLSRAIFEIGVRCVP 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           + +++   TG V+  Q  + L++F +E      +++  + EIG + TA+MI G++GSA+ 
Sbjct: 54  ITLIVGLFTGLVLGLQLYYVLAKFSSESLLGQAVALSIILEIGPVFTAIMIVGQAGSALS 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG  +  E+IDA+ TM +D +  L+SPR+WA II+ P+LT   +   I G  +   + 
Sbjct: 114 AEIGIQRNAEQIDALHTMQIDPIGFLVSPRLWAAIIAFPILTTFFDLIGIYGGYLTGVEL 173

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG-----VHSNSLGK 344
             +    +++R     +  NI+ GLIKA        ++   +G+          +  + +
Sbjct: 174 LGVDPGAYWNRIFEAVSPQNIYNGLIKALAFGIITTLICAFQGYFTHIKADIPGARGVSQ 233

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370
             T  VV S   +++ D L   F  A
Sbjct: 234 TTTRAVVYSSIAILMFDYLITSFQMA 259


>gi|294793372|ref|ZP_06758517.1| putative membrane protein [Veillonella sp. 6_1_27]
 gi|294795191|ref|ZP_06760325.1| putative membrane protein [Veillonella sp. 3_1_44]
 gi|294453983|gb|EFG22358.1| putative membrane protein [Veillonella sp. 3_1_44]
 gi|294455803|gb|EFG24168.1| putative membrane protein [Veillonella sp. 6_1_27]
          Length = 254

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 71/263 (26%), Positives = 126/263 (47%), Gaps = 9/263 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             +    IG+ ++  ++   S   ++   I                L  + +QM ++GV 
Sbjct: 1   MLSWLESIGRVVINGLSQMGSATLLVWQTIKQLKMI---------NLWHVFQQMAHLGVD 51

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +P++ L     GAV+  Q    L  +GA+     LM++   RE+G +L  V++AGR G+
Sbjct: 52  SLPIISLTLLFAGAVMTLQITDVLITYGAQSTVGGLMAVAMGRELGPILVGVVLAGRVGA 111

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           AI AEIG+MK+ E+IDA+R M +D V  L+ PR+ A +I +P+L        I G   V 
Sbjct: 112 AITAEIGTMKVTEQIDALRVMAVDPVGYLVVPRVVACMIMVPILAFYGVVIGIAGGYFVA 171

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
                +  + +       +T+++   GLIK+      I +V   +G    + + ++G   
Sbjct: 172 TVIKGLAPSTYLDSIQMFSTISDFTLGLIKSSVFGAVIALVGAYKGMETKMGAEAVGFST 231

Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369
           T+ VV SI +V +++   +   F
Sbjct: 232 TSSVVTSIILVFVLNYFLSTLLF 254


>gi|149202595|ref|ZP_01879567.1| ABC transporter, inner membrane subunit [Roseovarius sp. TM1035]
 gi|149143877|gb|EDM31911.1| ABC transporter, inner membrane subunit [Roseovarius sp. TM1035]
          Length = 261

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 121/264 (45%), Gaps = 7/264 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
                  IG+ ++  +      A           +     + F+ FL +L++    +G  
Sbjct: 4   ILGFLASIGRTVLSGLAAIGRIALF---AADTISQLARPPFYFREFLHALVQ----IGWL 56

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PVV + +  TG  +A Q     ++F AE     +++I   RE+G +L  +M+A R  S
Sbjct: 57  SLPVVGMTALFTGGALALQIYAGGARFNAETVVPSIVAIGLTRELGPVLGGLMVAARVAS 116

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           +I AEIG+MK+ E+IDA+ T+  + ++ L  PR+ A  +++P+L  + +   I+G  +V 
Sbjct: 117 SIAAEIGTMKVTEQIDALTTLSTNPMKYLTLPRVLAATLAVPVLVGVGDVLGIMGGFLVG 176

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
               D   A +           ++ +GLIK       + ++    G   G  +  +G+  
Sbjct: 177 VGRLDFSAATYLHNTIDFLETWDVVSGLIKGAAFGFIVALMGCYYGMNSGRGAQGVGRAT 236

Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370
            + VV +  +++  + L    +FA
Sbjct: 237 KSAVVAASVLILASNYLLTELFFA 260


>gi|17547680|ref|NP_521082.1| hypothetical protein RSc2961 [Ralstonia solanacearum GMI1000]
 gi|17429984|emb|CAD16668.1| putative abc-type transport system involved in resistance to
           organic solvents, permease component abc transporter
           protein [Ralstonia solanacearum GMI1000]
          Length = 255

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 62/262 (23%), Positives = 126/262 (48%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG  +   I+       +L  +I    +              L+ Q+ ++G     
Sbjct: 1   MISSIGFLVRILISRLGYATRMLLALIGAGRDVLRRP-------RLLVEQLRFIGNDSFI 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK NEE+ A+  M +D +  +++PR W   I++PLL  + +   I+G   V    
Sbjct: 114 AEIGLMKANEELIAMEMMAVDPLARVLAPRFWGGFIAMPLLAAIFSAVGILGGYFVGVGL 173

Query: 290 YDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+  +    + ++  G+IK+     A+  VA+ +G+        + +  T 
Sbjct: 174 IGVDAGAFWSQMQAGVDVVKDVLNGVIKSVVFGVAVTFVALYQGYEAKATPEGVSRATTR 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D +     F+
Sbjct: 234 TVVIASLAVLALDFVLTALMFS 255


>gi|299065474|emb|CBJ36643.1| conserved membrane protein of unknown function, DUF140 [Ralstonia
           solanacearum CMR15]
          Length = 255

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 61/262 (23%), Positives = 126/262 (48%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG  +   I+       +L  ++    +              L+ Q+ ++G     
Sbjct: 1   MISSIGFLVRVLISRLGYATRMLLALLGAGRDVLRRP-------RLLVEQLRFIGNDSFI 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK NEE+ A+  M +D +  +++PR W   I++PLL  + +   I+G   V    
Sbjct: 114 AEIGLMKANEELIAMEMMAVDPLARVLAPRFWGGFIAMPLLAAIFSAVGIVGGYFVGVGL 173

Query: 290 YDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+  +    + ++  G+IK+     A+  VA+ +G+        + +  T 
Sbjct: 174 IGVDAGAFWSQMQAGVDVVKDVLNGVIKSVVFGVAVTFVALYQGYEAKATPEGVSRATTR 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D +     F+
Sbjct: 234 TVVIASLAVLALDFVLTALMFS 255


>gi|121593173|ref|YP_985069.1| hypothetical protein Ajs_0749 [Acidovorax sp. JS42]
 gi|222109932|ref|YP_002552196.1| hypothetical protein Dtpsy_0717 [Acidovorax ebreus TPSY]
 gi|120605253|gb|ABM40993.1| protein of unknown function DUF140 [Acidovorax sp. JS42]
 gi|221729376|gb|ACM32196.1| protein of unknown function DUF140 [Acidovorax ebreus TPSY]
          Length = 260

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 60/261 (22%), Positives = 128/261 (49%), Gaps = 8/261 (3%)

Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171
            H+G  +   + D    A +   ++   G+        +        Q++++G   + ++
Sbjct: 7   THVGYAVRTKLADVGMGARLFARLLGLFGDVMRRPGLVR-------DQVHFLGNYSLSII 59

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
            +     G V+A QG   L  +G+      ++++  +RE+G ++TA++ AGR+G+++ AE
Sbjct: 60  AMSGLFVGFVLALQGYNVLQLYGSANSLGLVVTLGLVRELGPVVTALLFAGRAGTSLTAE 119

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           IG M+  E++ A+  M +D VR +++PR W  +I++PLL ++ N   +IG  +V      
Sbjct: 120 IGLMRAGEQLSAMEMMAVDPVRRILAPRFWGGVIAMPLLALVFNAVGVIGGWLVGVVLIG 179

Query: 292 IPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
           +    F+ +  S   +  ++  G++K+     A+  +A+ +GF        + +  T  V
Sbjct: 180 VDGGAFWGQMQSGVDVWKDVGNGIVKSLAFGVAVTFIAVLQGFVAKPTPEGVSRATTRTV 239

Query: 351 VQSISIVIIIDSLFAIFYFAI 371
           V +   V+ +D +     F+I
Sbjct: 240 VMASLSVLGLDFVLTALMFSI 260


>gi|149913819|ref|ZP_01902351.1| ABC transporter, inner membrane subunit [Roseobacter sp. AzwK-3b]
 gi|149812103|gb|EDM71934.1| ABC transporter, inner membrane subunit [Roseobacter sp. AzwK-3b]
          Length = 261

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 55/264 (20%), Positives = 119/264 (45%), Gaps = 4/264 (1%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
            + +   +G+   + +    +   +    +          +  + F  +L++    +G  
Sbjct: 1   MRLILSLLGRLGAQVLAMLGAVGRVTLFALETVTHLMRPPFYAREFGHALVQ----IGWL 56

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PVV + +  TG  +A Q     ++F AE     +++I   RE+G +L  +M+A R  S
Sbjct: 57  SLPVVGMTALFTGGALALQIYAGGARFNAETVVPSIVAIGLTRELGPVLGGLMVAARVAS 116

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           +I AEIG+MK+ E+IDA+ T+  + ++ L  PR+ A  +++PLL  + +   I+G  +V 
Sbjct: 117 SIAAEIGTMKVTEQIDALTTLSTNPMKYLTLPRVLAATLAVPLLVGVGDVIGIMGGFLVG 176

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
               D     +           ++ +G+IK       + ++    G   G  +  +G+  
Sbjct: 177 VGRLDFGAGTYLHNTLDFLETWDVVSGMIKGAVFGFIVALMGCYYGMNSGRGAQGVGRAT 236

Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370
              VV +  +++  + +    +F+
Sbjct: 237 KAAVVAASVLILASNYILTELFFS 260


>gi|77463016|ref|YP_352520.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides
           2.4.1]
 gi|126461890|ref|YP_001043004.1| hypothetical protein Rsph17029_1122 [Rhodobacter sphaeroides ATCC
           17029]
 gi|77387434|gb|ABA78619.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides
           2.4.1]
 gi|126103554|gb|ABN76232.1| protein of unknown function DUF140 [Rhodobacter sphaeroides ATCC
           17029]
          Length = 260

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 58/252 (23%), Positives = 116/252 (46%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +      +G +    G   +  ++   +   L+  +  +G   +PVV L +  
Sbjct: 7   IAALGRATLGMLAAVGRIALFAGAVVSHIFRPPFYPRELLTALIQIGWLSLPVVGLTAIF 66

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG  +A Q     ++F AE     +++I   RE+G +L  +M+A R  S+I AEIG+MK+
Sbjct: 67  TGGALALQIYAGGARFSAEAVVPSIVAIGMTRELGPVLGGLMVAARVASSIAAEIGTMKV 126

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+ T+  + ++ L  PR+ A  +++P+L  + +   I G  +V     D   A +
Sbjct: 127 TEQIDALVTLSTNPLKYLAVPRVLAATLAVPILVAVGDSIGIAGGWLVGVNRLDFNSATY 186

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                    + ++ +GL+K       + ++    G   G  +  +G+   + VV +  ++
Sbjct: 187 IKNTTDFLEVWDVGSGLVKGAAFGFIVALMGCYHGMNSGRGAQGVGRATKSAVVAASVLI 246

Query: 358 IIIDSLFAIFYF 369
           +  + L    +F
Sbjct: 247 LAANYLLTEVFF 258


>gi|50086238|ref|YP_047748.1| toluene tolerance efflux ABC transporter membrane protein
           [Acinetobacter sp. ADP1]
 gi|49532214|emb|CAG69926.1| toluene tolerance efflux transporter (ABC superfamily, membrane)
           [Acinetobacter sp. ADP1]
          Length = 258

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 72/263 (27%), Positives = 130/263 (49%), Gaps = 9/263 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G+ +++ +      A +L  ++ +            G     I QMY VGV  +
Sbjct: 2   NAIAWLGRLVIERVRGIGVAALMLLQILFSMPST--------GGFRRFIYQMYRVGVMSL 53

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G VI  QG   L   G+E     ++S+  LRE+  ++ A++ AGR+GSA+
Sbjct: 54  LIITVSGLFIGLVIGLQGYSILVNVGSEAMLGTMVSLTLLRELAPVVAALLFAGRAGSAL 113

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIGSMK +E++ ++  +G+D ++ ++SPR+WA I+SLP+LT++     I+G  +V   
Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGILGGKMVGVD 173

Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +    F+S   S      ++  G+IK+   A     +A+ +G+A       +   +T
Sbjct: 174 FLGVDEGSFWSGMQSNVQFGHDVVNGIIKSIVFALVCTWIAVYQGYACDPTPEGIATSMT 233

Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370
             VV S   V+  D +     F 
Sbjct: 234 RTVVYSSLCVLGSDFVLTAVMFG 256


>gi|251771480|gb|EES52057.1| putative integral membrane protein [Leptospirillum
           ferrodiazotrophum]
          Length = 253

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 69/250 (27%), Positives = 127/250 (50%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
            F         I G +           ++      +   Q+  +G     VV++ +F TG
Sbjct: 4   DFSGRLVRVPEIAGSLFMMGLSGLRGIFRPSFLGRNFFEQLLRIGADSTLVVVVTAFFTG 63

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A Q      +F AE     ++++   RE+G ++T++M+ GRSGSA+ AE+GSM+++E
Sbjct: 64  MVLALQAWIGFRKFNAEGLVGAVVTLSMTRELGPVITSLMVTGRSGSAMAAELGSMRVSE 123

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +IDA+ T+ +D V  L++PR++A +++LPLLT LA+   I G  +V  K   +   ++F 
Sbjct: 124 QIDALETLAVDPVDYLVTPRLYASLVALPLLTALADLVGIGGGYVVAVKLLGLSPHLYFQ 183

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                  L +  +G++K+ F    + + A + GF     +  +G+ VT  VV     +++
Sbjct: 184 EISHYVDLHDFISGIVKSVFFGGLLALWACRTGFVASGGAAGVGRAVTFAVVSGSMSILV 243

Query: 360 IDSLFAIFYF 369
           +D     + F
Sbjct: 244 VDYFLTAWLF 253


>gi|51246140|ref|YP_066024.1| toluene ABC-transporter, permease protein [Desulfotalea
           psychrophila LSv54]
 gi|50877177|emb|CAG37017.1| related to toluene ABC-transporter, permease protein [Desulfotalea
           psychrophila LSv54]
          Length = 262

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 70/255 (27%), Positives = 132/255 (51%), Gaps = 11/255 (4%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
            I+   +       +++  G+     ++    +  ++  ++++G   + VVIL  F TG 
Sbjct: 13  AIDRVTNLGRFCLFLLTGIGQIFQKPFQ----IFRIVENIWFIGTKSMAVVILTGFFTGM 68

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A QG + L++FG+       +++  +RE+G +LTA+MI  R+GSA+ AEIG+M+I+E+
Sbjct: 69  VLALQGYYALAKFGSAGMLGSAVALTLIRELGPVLTAIMITARAGSAMAAEIGTMRISEQ 128

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +DA++TM ++ V+ + SPR+ A II  PLLT + +   I G   +      +   ++  R
Sbjct: 129 LDALQTMDINPVKFVFSPRLIASIICFPLLTSIFDVVGIFGGLFIATT-LKVNGYIYMYR 187

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV------GVHSNSLGKKVTTCVVQSI 354
            H +  + +I +G+IK+   A  +      +G+        G  S ++    T  VV S 
Sbjct: 188 VHESVVMEDIRSGIIKSLVFAVVVVSTCCFKGYYAHIQKEGGFGSRAVSLATTNAVVSSS 247

Query: 355 SIVIIIDSLFAIFYF 369
            +++I D L      
Sbjct: 248 VLILIYDYLITYILL 262


>gi|217969318|ref|YP_002354552.1| hypothetical protein Tmz1t_0889 [Thauera sp. MZ1T]
 gi|217506645|gb|ACK53656.1| protein of unknown function DUF140 [Thauera sp. MZ1T]
          Length = 262

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 62/266 (23%), Positives = 129/266 (48%), Gaps = 8/266 (3%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
           ++  +    IG   +  I         L  V+ N+G+     +         IR++Y+ G
Sbjct: 2   SAIASALRRIGALTIDGIWRLGFATRFLFAVLLNSGQSLRRIH-------LTIRELYFSG 54

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
           V  + ++++     G V+  QG   L ++G+      ++++  LRE+G ++ A++ A R+
Sbjct: 55  VLSLLIIMVSGLFVGLVLGLQGYDILQRYGSADAVGVMVALSLLRELGPVIAALLFASRA 114

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           GSAI AEIG MK  E++ A+  M ++ +  +++PR W  ++S+PLL  L +   + G  +
Sbjct: 115 GSAITAEIGLMKTTEQLKAMDMMAVNPIARVVAPRFWGGVLSMPLLAALFSAMGVFGGWL 174

Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           +      +    F+S+  +      ++  G+IK+      + ++A+ EG+     +  + 
Sbjct: 175 ITVVVIGVDDGAFWSQMQAAVEFRYDVVNGVIKSAVFGTVVSLIAVFEGYDCQPTAEGVS 234

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYF 369
           + +T  VV S   ++ +D +   F F
Sbjct: 235 RAITRTVVTSALAILALDFVLTSFMF 260


>gi|152996434|ref|YP_001341269.1| hypothetical protein Mmwyl1_2412 [Marinomonas sp. MWYL1]
 gi|150837358|gb|ABR71334.1| protein of unknown function DUF140 [Marinomonas sp. MWYL1]
          Length = 260

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 133/261 (50%), Gaps = 7/261 (2%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170
              +G  ++ ++         L               +FK  +  L++Q+Y VGV  + +
Sbjct: 4   IELLGASLLDWLEAVGRAGIFL------VQSIFRLPVRFKESVNLLVKQLYSVGVLSLVI 57

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           +I+     G V++ QG   L++FG+E     L+++  LRE+  ++TA++ AGR+GS++ A
Sbjct: 58  IIVSGAFIGMVLSLQGYSILAKFGSEEAVGQLLALSLLRELSPVVTALLFAGRAGSSLTA 117

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           EIG MK  E++ +   MG+D +R +I+PR  A +I LP+L+++ + S I+G  +V  ++ 
Sbjct: 118 EIGLMKATEQLSSFEMMGVDPLRRVIAPRFIAGVICLPILSLIFSASGILGGHLVSVQWL 177

Query: 291 DIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            +    F+S    +     +I  GLIKA   +  +  +A+ +G+     S  +GK  T  
Sbjct: 178 GVYDGAFWSSMQQSVYFDTDIMNGLIKALCFSVVVTWIAVYQGYECVPTSEGIGKATTRT 237

Query: 350 VVQSISIVIIIDSLFAIFYFA 370
           VV     ++ +D +     F 
Sbjct: 238 VVLGSLAILALDFILTAAMFG 258


>gi|261379496|ref|ZP_05984069.1| toluene tolerance ABC efflux transporter, permease [Neisseria
           subflava NJ9703]
 gi|319638901|ref|ZP_07993659.1| ABC transport inner membrane subunit [Neisseria mucosa C102]
 gi|284797959|gb|EFC53306.1| toluene tolerance ABC efflux transporter, permease [Neisseria
           subflava NJ9703]
 gi|317399805|gb|EFV80468.1| ABC transport inner membrane subunit [Neisseria mucosa C102]
          Length = 258

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 73/262 (27%), Positives = 132/262 (50%), Gaps = 8/262 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G K + FI    S       +++ +G   A            IRQ+Y+ GV  V
Sbjct: 2   NFIRSVGAKTLGFIQSLGSITLFFLQILAKSGTAFARP-------RLSIRQIYFAGVLSV 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            +V +     G V+  QG  QL++F +      +++   LRE+G +L A++ A  +G A+
Sbjct: 55  LIVAVSGLFVGMVLGLQGYTQLAKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAM 114

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            +EIG MK  E+++A+  M +D V  +++PR WA + S+PLL  + N + I GA +V  +
Sbjct: 115 TSEIGLMKTTEQLEAMNVMAVDPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVE 174

Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +   +F+S+  +  T   ++  GLIK+     A+ ++A+ +GF     S  + +  T
Sbjct: 175 WLGLDGGIFWSQMQNNITFHYDVLNGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRAST 234

Query: 348 TCVVQSISIVIIIDSLFAIFYF 369
             VV S   ++ +D +   + F
Sbjct: 235 RTVVSSALTILAVDFILTAWMF 256


>gi|304437504|ref|ZP_07397462.1| ABC superfamily ATP binding cassette transporter permease protein
           [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304369554|gb|EFM23221.1| ABC superfamily ATP binding cassette transporter permease protein
           [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 255

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 70/252 (27%), Positives = 122/252 (48%), Gaps = 1/252 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +        +    +G V+   GE      + +  + S++ QM ++G   + +V L    
Sbjct: 5   LESVGAFVLTHLANIGRVVLLYGETMRQVTR-RLRVRSIVYQMAHLGADSLLIVGLTLLF 63

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG V+  Q A +  ++GA+     +++I   RE+G +L  V+ AGR G+AI AE+ +MK+
Sbjct: 64  TGIVLTLQIAHEFIRYGAQSTIGAVIAIGIGRELGPVLVGVVCAGRVGAAITAEVSTMKV 123

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+R M +  V  LI PR+ A ++ +P+LT+  +   ++G       Y  I    F
Sbjct: 124 TEQIDALRVMAVSPVNYLIVPRMLACMVVVPILTVFGDVIGVLGGYFTAVYYSGISGYTF 183

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                  A L ++  GLIKA F    I ++    G      +  +G      VV SI ++
Sbjct: 184 LHSITQYALLYDMTGGLIKAIFFGNVIAVLGCYYGLHAPSGAEGVGTATMQTVVTSIIVI 243

Query: 358 IIIDSLFAIFYF 369
            I++++   F F
Sbjct: 244 FILNAVLTFFLF 255


>gi|260886513|ref|ZP_05897776.1| toluene tolerance ABC efflux transporter, permease [Selenomonas
           sputigena ATCC 35185]
 gi|330839644|ref|YP_004414224.1| protein of unknown function DUF140 [Selenomonas sputigena ATCC
           35185]
 gi|260863656|gb|EEX78156.1| toluene tolerance ABC efflux transporter, permease [Selenomonas
           sputigena ATCC 35185]
 gi|329747408|gb|AEC00765.1| protein of unknown function DUF140 [Selenomonas sputigena ATCC
           35185]
          Length = 256

 Score =  217 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 72/261 (27%), Positives = 118/261 (45%), Gaps = 8/261 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
            L   IG  +++      S   +L   +           +F+     +  QM ++GV   
Sbjct: 4   RLLEKIGSFVLERFEWVGSVILLLAAAVKEMCR----PLRFRH----IFAQMSHLGVDSF 55

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            +V L    TG V+  Q A +  +FGA+     +++I   RE+G +L  V+ AGR GSAI
Sbjct: 56  AIVSLTMLFTGMVMTLQVAHEFIRFGAQSTIGGVIAIAIGRELGPVLVGVVCAGRVGSAI 115

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEI +MK+ E+IDA+R M    +  L+ PR+ A +  +PLLTI  +   + G   V   
Sbjct: 116 TAEISTMKVTEQIDALRVMATSPIGYLVVPRMIACMCMVPLLTIFGDVIGVFGGWFVAVH 175

Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
           Y  I    F +  H  A   ++  GLIKA      I ++    G      +  +G+  T 
Sbjct: 176 YAGIASYTFTNSIHVFAVPHDVTGGLIKAAVFGIVIAVLGAWYGLHAPEGAEGVGRATTK 235

Query: 349 CVVQSISIVIIIDSLFAIFYF 369
            VV +I  +  ++   +   +
Sbjct: 236 SVVAAIVCIFFLNVFLSFLLY 256


>gi|319942210|ref|ZP_08016526.1| ABC-type transporter [Sutterella wadsworthensis 3_1_45B]
 gi|319804263|gb|EFW01155.1| ABC-type transporter [Sutterella wadsworthensis 3_1_45B]
          Length = 259

 Score =  217 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 68/264 (25%), Positives = 134/264 (50%), Gaps = 10/264 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             NL   +G  ++  ++         G V++  G    S          +I Q++++G  
Sbjct: 2   IVNLLAQLGSWVLSLLSSVGRFGIFSGRVLARLGGAGLSP---------IISQIHFIGNY 52

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++ +     G V+  QG + L  +G+E     L+++  +RE+G ++TA++ AGR+G+
Sbjct: 53  SLLIISVSGLFVGFVLGLQGYYVLVTYGSEEALGTLVALSLVRELGPVVTALLFAGRAGT 112

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG M+  E++ A+  MG+D +R + +PR     IS+P+L ++ +   IIGA +V 
Sbjct: 113 ALTAEIGLMRSGEQLAAMEMMGVDPIRRVFAPRFIGGFISMPILALIFSAVGIIGAWMVG 172

Query: 287 WKYYDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                     F+S+  S     ++I  G +K+     A+ ++A+ +G+A     + + + 
Sbjct: 173 VLLIGTDNGAFWSQMESAVDVFSDICNGFVKSVVFGAAVTLIALYQGWASRPTPDGVARA 232

Query: 346 VTTCVVQSISIVIIIDSLFAIFYF 369
            TT VV S  +V+ +D +   + F
Sbjct: 233 TTTTVVVSSLLVLGLDFIMTAWMF 256


>gi|294339439|emb|CAZ87798.1| Toluene tolerance protein Ttg2B [Thiomonas sp. 3As]
          Length = 261

 Score =  217 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 67/265 (25%), Positives = 128/265 (48%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             +    IG    + ++     A +   +I   G               LI+QMY++G  
Sbjct: 3   VADRLVSIGAGTRQLLSSLGYAARLFARLILLVGRVFMRP-------SLLIQQMYFLGNL 55

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++ +     G V+  QG + LS++G+      L+++  +RE+G ++TA++ AGR+G+
Sbjct: 56  SLVIIAVSGLFVGFVLGLQGYYTLSRYGSSSALGVLVALSLVRELGPVVTALLFAGRAGT 115

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           ++ AEIG MK  E+I A+  M +D V  +++PR WA +I +PLL  + +   I+G  +V 
Sbjct: 116 SLTAEIGLMKAGEQIAAMEMMAVDPVVRVLAPRFWAGVIVMPLLAAVFSAVGIMGGYVVG 175

Query: 287 WKYYDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                +    F+S+  S      ++  G+IK+     A+  VA+ +G+        + + 
Sbjct: 176 VVMIGVDAGQFWSQMQSGVDVFKDVGNGVIKSVVFGLAVTFVALLQGWRSQPTPEGVSRA 235

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV +   V+ +D +     F+
Sbjct: 236 TTRTVVIASLAVLALDFVLTAMMFS 260


>gi|152990804|ref|YP_001356526.1| ABC transporter, permease [Nitratiruptor sp. SB155-2]
 gi|151422665|dbj|BAF70169.1| ABC transporter, permease [Nitratiruptor sp. SB155-2]
          Length = 263

 Score =  217 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 67/265 (25%), Positives = 122/265 (46%), Gaps = 4/265 (1%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
            + + +++G   V+F          +   I     F    Y+ K      ++QM  +GV 
Sbjct: 1   MEQVFFYLGYPFVQFFRMLERFGAFILFQIKILPLFFKPPYRVK----ETLQQMDIIGVG 56

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + V+ L +  TG V A Q      +FGAE F    + +   +E+G +  A+M+  R+ S
Sbjct: 57  SLFVISLTAIFTGLVEAIQLYHGFHKFGAEEFMGYTIFVSISKELGPVFGALMLVSRAVS 116

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AE+G+M++ E+IDAI T+ +D  + LI PR+ A  +S P+L I+  F   I A ++ 
Sbjct: 117 AMTAELGTMRVTEQIDAIDTLAVDSKKYLIVPRVIAATLSTPILVIVFVFLGNIAAYLIS 176

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
                +    + +   +    ++I TG+IKA      I I+    G+     +  +G   
Sbjct: 177 VYALGVNPNSYKNTITTYLEFSDIGTGIIKAFVFGYLISIIGTYIGYFTRGGARGVGLST 236

Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371
           T  VV +   V + +   +  +  +
Sbjct: 237 TKSVVYAAMTVFVANYFLSTLFLYL 261


>gi|296135334|ref|YP_003642576.1| protein of unknown function DUF140 [Thiomonas intermedia K12]
 gi|295795456|gb|ADG30246.1| protein of unknown function DUF140 [Thiomonas intermedia K12]
          Length = 261

 Score =  217 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 66/265 (24%), Positives = 128/265 (48%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             +    IG    + ++     A +   ++   G               LI+QMY++G  
Sbjct: 3   VADRLVSIGVGTRQLLSSLGYAARLFVRLLWLVGRVFMRP-------SLLIQQMYFLGNL 55

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++ +     G V+  QG + LS++G+      L+++  +RE+G ++TA++ AGR+G+
Sbjct: 56  SLVIIAVSGLFVGFVLGLQGYYTLSRYGSSSALGVLVALSLVRELGPVVTALLFAGRAGT 115

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           ++ AEIG MK  E+I A+  M +D V  +++PR WA +I +PLL  + +   I+G  +V 
Sbjct: 116 SLTAEIGLMKAGEQIAAMEMMAVDPVVRVLAPRFWAGVIVMPLLAAVFSAVGIMGGYVVG 175

Query: 287 WKYYDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                +    F+S+  S      ++  G+IK+     A+  VA+ +G+        + + 
Sbjct: 176 VVMIGVDAGQFWSQMQSGVDVFKDVGNGVIKSVVFGLAVTFVALLQGWRSQPTPEGVSRA 235

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV +   V+ +D +     F+
Sbjct: 236 TTRTVVIASLAVLALDFVLTAMMFS 260


>gi|113869373|ref|YP_727862.1| ABC-type transporter, permease component involved in toluene
           tolerance [Ralstonia eutropha H16]
 gi|113528149|emb|CAJ94494.1| ABC-type transporter, permease component involved in toluene
           tolerance [Ralstonia eutropha H16]
          Length = 259

 Score =  217 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 58/265 (21%), Positives = 130/265 (49%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             +    IG  + + ++       +   ++  +                +  Q+++VG  
Sbjct: 1   MTDFFITIGAAVRRSVSGLGRATRMFLTLLGLSPALLRR-------FRLVTDQVFFVGNL 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+
Sbjct: 54  SLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGT 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           ++ AEIG MK  E++ A+  M ++ ++ +I+PR WA +I++P+L  + +   I+G  +V 
Sbjct: 114 SLTAEIGLMKAGEQLTAMEMMAVNPLQRVIAPRFWAGVIAMPVLAAIFSAVGILGGYVVG 173

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
            +   +    F+S+      +  ++  G+IK+     A+  +A+ +GF        + + 
Sbjct: 174 VQLIGVDAGAFWSQMQGGVDVRADVLNGVIKSFIFGIAVTFIALYQGFEAKPTPEGVSRA 233

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV +   V+ +D L     F+
Sbjct: 234 TTRTVVIASLAVLGLDFLLTALMFS 258


>gi|325109134|ref|YP_004270202.1| hypothetical protein Plabr_2580 [Planctomyces brasiliensis DSM
           5305]
 gi|324969402|gb|ADY60180.1| protein of unknown function DUF140 [Planctomyces brasiliensis DSM
           5305]
          Length = 271

 Score =  217 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 72/273 (26%), Positives = 129/273 (47%), Gaps = 7/273 (2%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
           S  +       + +G+ IV  I  +   A      I         S         L   +
Sbjct: 2   SIAHEPRTTPIHWLGELIVAPIAAAGDFALFAWATIRWLAIKWPRS-------SVLWPNL 54

Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
           Y +GV  +PVV++     G V+A Q   QL     E     ++++  ++E+G +L A M+
Sbjct: 55  YQIGVLSLPVVMVTGGFIGMVLAIQTYDQLRLMHMESHLGSVINLALVKELGPVLAATML 114

Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280
           AGR GSAI AE+G+M++ E+IDA+  +G D V+ L+ PR    ++ +PLLTI+A+   ++
Sbjct: 115 AGRVGSAIAAELGTMRVTEQIDALEALGADPVQYLVVPRFLGCVLLIPLLTIVADTVGML 174

Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
              +       I    ++   ++  TL ++++G++K+ F   AI +V+   GF     + 
Sbjct: 175 CGWLFSTSVLGINSYFYWHHTYAYITLFDVYSGIMKSVFFGAAIALVSCHRGFQAKAGAE 234

Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
            +G   T   V S   ++ +D L  +    + I
Sbjct: 235 GVGTAATQTFVYSFVCILFLDFLAGMLLSQVYI 267


>gi|319761579|ref|YP_004125516.1| hypothetical protein Alide_0863 [Alicycliphilus denitrificans BC]
 gi|330823447|ref|YP_004386750.1| hypothetical protein Alide2_0819 [Alicycliphilus denitrificans
           K601]
 gi|317116140|gb|ADU98628.1| protein of unknown function DUF140 [Alicycliphilus denitrificans
           BC]
 gi|329308819|gb|AEB83234.1| protein of unknown function DUF140 [Alicycliphilus denitrificans
           K601]
          Length = 260

 Score =  217 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 57/260 (21%), Positives = 127/260 (48%), Gaps = 8/260 (3%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172
           H+G  +   + D    A +   ++   G         +        Q++++G   + ++ 
Sbjct: 8   HVGYAVRSKLADLGMGARLFVRLVGLFGTAMRRFGLVR-------DQVHFLGNYSLSIIA 60

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
           +     G V+A QG   L  +G+      ++++  +RE+G ++TA++ AGR+G+++ AEI
Sbjct: 61  MSGLFVGFVLALQGYNVLQLYGSANSLGLVVTLGLVRELGPVVTALLFAGRAGTSLTAEI 120

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           G M+  E++ A+  M +D V+ +++PR W  +I++PLL  + +   +IG  +V      +
Sbjct: 121 GLMRAGEQLSAMEMMAVDPVQRILAPRFWGGVIAMPLLAAVFSAVGVIGGWLVGVVLIGV 180

Query: 293 PFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
               F+ +  S+  +  ++  G++K+     A+  +A+ +G+        + +  T  VV
Sbjct: 181 DGGAFWGQMQSSVDVWKDVGNGVVKSVVFGVAVTFIAVLQGYMAKPTPEGVSRATTRTVV 240

Query: 352 QSISIVIIIDSLFAIFYFAI 371
            +   V+ +D +     F+I
Sbjct: 241 MASLTVLGLDFVLTALMFSI 260


>gi|224373004|ref|YP_002607376.1| abc transporter, permease protein [Nautilia profundicola AmH]
 gi|223589585|gb|ACM93321.1| abc transporter, permease protein [Nautilia profundicola AmH]
          Length = 259

 Score =  217 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 71/263 (26%), Positives = 114/263 (43%), Gaps = 7/263 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             +  Y IGK  + FI            ++    +           +  +  Q+ ++G  
Sbjct: 2   ISDFFYIIGKSAIDFIEGLGKFTIFQLKLLPLFLKPPFR-------IRQIFEQINFMGFG 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + V+ L SF TG V A Q      +FG E F    + I   +E+G +  A+M+  R  S
Sbjct: 55  SLGVIFLTSFFTGLVEAVQLYNGFHKFGVEDFMGYTIFISICKELGPVFAALMVVSRGIS 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A  AE+GSM++ E+IDA+  M +D  + LI PRI   IISLPLL +  +  A IGA ++ 
Sbjct: 115 AYAAELGSMRVTEQIDALDVMAVDSKQYLIVPRIIGTIISLPLLILFFDAVANIGAYLIS 174

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
               D+    +         L +   G++K       I  V    G+     +  +G   
Sbjct: 175 VYTLDVNGYTYIENIKQFGELGDFTEGIVKGIVFGYLISAVGTYIGYNTRGGAKGVGVST 234

Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369
           T  VV S  ++ + D + + FY 
Sbjct: 235 TKAVVISSILIFVADYIVSAFYL 257


>gi|307105433|gb|EFN53682.1| hypothetical protein CHLNCDRAFT_10117 [Chlorella variabilis]
          Length = 256

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 53/237 (22%), Positives = 116/237 (48%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
             +   G+      + K    + + Q+  VG   + V +L +   G V   Q   + ++ 
Sbjct: 10  AAVVLGGQALVRILQGKIHWKNTLDQLNMVGPRSLGVCLLTAAFVGMVFTIQFIREFAKL 69

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           G       ++++   RE+  ++T++++AGR GSA  AE+G+M+++E+ D++R +G D V 
Sbjct: 70  GLTRSVGGVLALALSRELTPVVTSIIVAGRVGSAFAAELGTMQVSEQTDSLRVLGSDPVD 129

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            LI+PR+ A +++ P+L +L     +  + ++    Y++   V         +  ++ T 
Sbjct: 130 YLITPRVMACMVAGPILNLLCFCMGMGASVLLADTVYNVSCNVILDSAMRAISSWDVITS 189

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +IK       I  V+   G+     +  +G+  T+ VV S+ ++ + D   ++ +F+
Sbjct: 190 MIKCWVFGTIIATVSCAWGYTTTGGAKGVGESTTSAVVISLVLIFVFDFALSLLFFS 246


>gi|28898136|ref|NP_797741.1| putative ABC transport system permease [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|153836560|ref|ZP_01989227.1| ABC-type transport system, permease component [Vibrio
           parahaemolyticus AQ3810]
 gi|260366435|ref|ZP_05778874.1| ABC transporter, permease protein [Vibrio parahaemolyticus K5030]
 gi|260878481|ref|ZP_05890836.1| ABC-type transport system, permease protein [Vibrio
           parahaemolyticus AN-5034]
 gi|260897062|ref|ZP_05905558.1| ABC transporter, permease protein [Vibrio parahaemolyticus
           Peru-466]
 gi|260901858|ref|ZP_05910253.1| ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037]
 gi|28806350|dbj|BAC59625.1| putative ABC transport system permease protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|149750158|gb|EDM60903.1| ABC-type transport system, permease component [Vibrio
           parahaemolyticus AQ3810]
 gi|308087695|gb|EFO37390.1| ABC transporter, permease protein [Vibrio parahaemolyticus
           Peru-466]
 gi|308091102|gb|EFO40797.1| ABC-type transport system, permease protein [Vibrio
           parahaemolyticus AN-5034]
 gi|308108149|gb|EFO45689.1| ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037]
 gi|308113110|gb|EFO50650.1| ABC transporter, permease protein [Vibrio parahaemolyticus K5030]
          Length = 357

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 93/356 (26%), Positives = 168/356 (47%), Gaps = 17/356 (4%)

Query: 16  KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH---GKIKLQ 72
            S  + ++ +     I +S      +V+ S +T +D  G   +     ++     +I + 
Sbjct: 15  TSAMVGDLWEK-ANDILESYPDSPIVVNASNLTFVDISGVAFLSDLQTRFRPPGAEISII 73

Query: 73  GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHIL 132
           G+S  + +L             +                  +G    + +    S    +
Sbjct: 74  GLSASLAELV----------PPSNIENAPQIPRGEDGFFERVGNATREMLVYVGSVVRFI 123

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
              +         + +      ++       G   VP+++LI F+ G +IA +      Q
Sbjct: 124 KECVLVFK--LGINRRKNVNWTTVSNIATRAGADAVPIILLIGFLMGVIIAFEIGLVAQQ 181

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
           FGA +F  D + I   RE+G L+TA++ AGR+G+A  AEIG+ K+NEEI+A+ T G+  V
Sbjct: 182 FGAVLFVADGIGISMFRELGPLMTAIVFAGRTGAAFAAEIGTQKVNEEINALHTFGICPV 241

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
             L+ PRI+A ++ LPLLT+LA+   ++G ++V+ K+ DI F  ++ +  +  ++ ++F 
Sbjct: 242 EFLVIPRIYASVLVLPLLTVLADIIGVLGGALVLLKF-DISFVQYYHQLLNALSVWDLFF 300

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           GLIKA      I ++  + G A G  S S+G   T+ VV SI  +++ID  F +  
Sbjct: 301 GLIKATTFGFIIAVIGCERGLATGQGSTSVGLAATSAVVSSIIWIVVIDGFFTVLL 356


>gi|312890492|ref|ZP_07750028.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM
           18603]
 gi|311296950|gb|EFQ74083.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM
           18603]
          Length = 257

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 61/245 (24%), Positives = 119/245 (48%), Gaps = 3/245 (1%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +G   +    F  + +         +RQ Y +G   + +V + SF+ G V+  Q  
Sbjct: 12  LMEEVGEQATFFTGFFRNLFTGGFEWSEFVRQCYEIGYRSITLVGITSFIMGVVLTLQSR 71

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L +FGA      ++ +  +REIG ++TA++ AG+  S I AE+GSMK+ E+IDA+   
Sbjct: 72  PTLVKFGASSMLPFMVCVSIIREIGPVITAIICAGKISSGIGAELGSMKVTEQIDAMEVS 131

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G + ++ L+  RI A  I +P+LT++ +   + G  + +       + ++F++  S+   
Sbjct: 132 GANPMQYLVVTRILATTIMIPILTLMGDVLGLFGGFLAVHFADHTSWQLYFNKCVSSVDF 191

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL---F 364
           +++   +IK  F   A+G +   +GF     + S+G    + VV +   +  +D +    
Sbjct: 192 SDLLPAVIKTVFFGFAVGFIGCYKGFNSNRGTESVGIAANSAVVSASLWIFFLDVIAVQI 251

Query: 365 AIFYF 369
              +F
Sbjct: 252 TQLFF 256


>gi|119946509|ref|YP_944189.1| ABC-type transporter inner membrane protein [Psychromonas
           ingrahamii 37]
 gi|119865113|gb|ABM04590.1| ABC-type transporter inner membrane protein [Psychromonas
           ingrahamii 37]
          Length = 234

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 63/219 (28%), Positives = 120/219 (54%), Gaps = 1/219 (0%)

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
               I Q++ +G+  +P+++      G V++ QG   L  + AE     ++++  LRE+G
Sbjct: 15  FPLFIGQIFQLGILSLPIILTAGLFIGMVLSLQGYNVLVDYAAEESLGSMVALSLLRELG 74

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            ++TA++ AGR+GSA+ AEIG M+  E+I ++  M +  ++ +I+PR  A I++LPLLT+
Sbjct: 75  PVVTALLFAGRAGSALTAEIGLMQSTEQIASMEMMAVSPLKRVIAPRFLAGIVTLPLLTL 134

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKE 331
           + N  AI G  ++   +  +    ++S    +   L ++  G+IK+      I  VA+  
Sbjct: 135 MFNVVAIWGGYLIGVSWMGVDGGAYWSVMQGSVDYLPDVMNGVIKSIVFGVMITWVALYN 194

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G+ V  ++  + +  T  VV S  +V+ +D +  +F F 
Sbjct: 195 GYYVMPNAIGISRSTTQTVVVSSLLVLAMDFILTVFMFG 233


>gi|73542805|ref|YP_297325.1| hypothetical protein Reut_A3121 [Ralstonia eutropha JMP134]
 gi|72120218|gb|AAZ62481.1| Protein of unknown function DUF140 [Ralstonia eutropha JMP134]
          Length = 258

 Score =  217 bits (553), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 58/265 (21%), Positives = 130/265 (49%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
                  IG  + + +      A +   V+  +                +  Q+++VG  
Sbjct: 1   MTGFFAAIGSAVRQGVAGLGHAAGMFFTVLGLSPALLRR-------FRLVTDQIFFVGNL 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+
Sbjct: 54  SLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVITALLFAGRAGT 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           ++ AEIG MK  E++ A+  M ++ ++ +I+PR WA ++++P+L  + +   ++G  +V 
Sbjct: 114 SLTAEIGLMKAGEQLTAMEMMAVNPLQRVIAPRFWAGVVAMPVLAAIFSAVGVLGGYLVG 173

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
            +   +    F+S+  +   +  ++  G+IK+     A+  +A+ +GF        + + 
Sbjct: 174 VQLIGVDAGAFWSQMQAGVDVRDDVVNGVIKSFIFGIAVTFIALYQGFEAKPTPEGVSRA 233

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV +   V+ +D L     F+
Sbjct: 234 TTRTVVIASLAVLGLDFLLTALMFS 258


>gi|284036726|ref|YP_003386656.1| hypothetical protein Slin_1812 [Spirosoma linguale DSM 74]
 gi|283816019|gb|ADB37857.1| protein of unknown function DUF140 [Spirosoma linguale DSM 74]
          Length = 271

 Score =  217 bits (553), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 73/244 (29%), Positives = 123/244 (50%), Gaps = 7/244 (2%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +++ +F+      +  +G       E     Y+FK     ++RQ Y VG   + ++    
Sbjct: 20  RRLDRFLLGLADVSSFIGRFFR---EALLPPYEFK----EIVRQCYEVGFRSLLLISTTG 72

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
           F+TG V   Q    LS+FGA  +   L++I  +R +G L+TA++ AG+ GS+I AE+GSM
Sbjct: 73  FITGIVFTNQSRPSLSEFGATSWLPSLIAIAIVRALGPLVTALIAAGKVGSSIGAELGSM 132

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
            + E+IDA+   G D  + L+  R+ A   ++PLLT+   F  +IGA I + +     F 
Sbjct: 133 NVTEQIDAMEVSGTDPFKFLVVTRVLATSFTIPLLTMYTIFVGLIGAYINVNQNEQTSFT 192

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            F        T  +IF  ++K+      IG+V   +G+     +  +GK   + VV S+ 
Sbjct: 193 SFMQEVFGAITYLDIFASVLKSIVFGFTIGMVGCYKGYHSSKGTEGVGKAANSAVVTSMF 252

Query: 356 IVII 359
           +V I
Sbjct: 253 LVFI 256


>gi|146277114|ref|YP_001167273.1| hypothetical protein Rsph17025_1067 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145555355|gb|ABP69968.1| protein of unknown function DUF140 [Rhodobacter sphaeroides ATCC
           17025]
          Length = 260

 Score =  217 bits (553), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 56/252 (22%), Positives = 114/252 (45%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +      +G +        +  ++   +    +  +  +G   +PVV L +  
Sbjct: 7   IAALGRATLGALAAIGRIALFAAAVISHLFRPPFYPREFLNALIQIGWLSLPVVGLTAIF 66

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG  +A Q     ++F AE     +++I   RE+G +L  +M+A R  S+I AEIG+MK+
Sbjct: 67  TGGALALQIYAGGARFSAEAVVPSIVAIGMTRELGPVLGGLMVAARVASSIAAEIGTMKV 126

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+ T+  + ++ L  PR+ A  +++P+L  + +   I G  +V     D   A +
Sbjct: 127 TEQIDALVTLSTNPLKYLAVPRVLAATLAVPVLVAVGDSIGIAGGWLVGVNRLDFNSATY 186

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                    + ++ +GL+K       + ++    G   G  +  +G+   + VV +  ++
Sbjct: 187 IKNTVDFLEVWDVGSGLVKGAAFGFIVALMGCYHGMNSGRGAQGVGRATKSAVVAASVLI 246

Query: 358 IIIDSLFAIFYF 369
           +  + L    +F
Sbjct: 247 LAANYLLTEVFF 258


>gi|297171834|gb|ADI22824.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [uncultured
           Oceanospirillales bacterium HF0500_29K23]
          Length = 260

 Score =  217 bits (552), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 72/258 (27%), Positives = 130/258 (50%), Gaps = 3/258 (1%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           +G+     + D+ +    LG V     +   S +  +     L+ Q++++GV    VV+L
Sbjct: 1   MGRSADNPLKDAFAG---LGSVTVLFLDTVRSIFAKRFRGRDLVEQLHFIGVKSQSVVLL 57

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
               TG V+  Q   Q  +   +   + ++++   RE+G +LT++MIAGR G+A+ A++G
Sbjct: 58  TGAFTGMVMCAQFYIQFHKVKMDSAVMSVVTVAMARELGAVLTSLMIAGRVGAAMAAQLG 117

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           +MK+ E+IDA+RT+    V  L++PR+ A++ISLPLLT  A   +++   +V      + 
Sbjct: 118 TMKVTEQIDALRTLATSPVDYLVAPRLLAMLISLPLLTAEAIAISMVSGMLVAVYLLGLD 177

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
               +S         +I+ GLIKA   A  I  VA  +G   G  +  +GK  T  VV +
Sbjct: 178 PVFLWSNMVFYTGSVDIWMGLIKAFIFAGIIATVACHKGMHCGQGAEGVGKATTEAVVAA 237

Query: 354 ISIVIIIDSLFAIFYFAI 371
              +++ +    +    +
Sbjct: 238 SISILVSNFFVTLVLNNL 255


>gi|83952043|ref|ZP_00960775.1| ABC transporter, inner membrane subunit [Roseovarius nubinhibens
           ISM]
 gi|83837049|gb|EAP76346.1| ABC transporter, inner membrane subunit [Roseovarius nubinhibens
           ISM]
          Length = 261

 Score =  217 bits (552), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 64/264 (24%), Positives = 123/264 (46%), Gaps = 7/264 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
                  IG  ++ F+          G  +S+        +  + F  +LI+    +G  
Sbjct: 4   IAQFLASIGATVLGFLATIGRVTIFAGNTVSH---LIRPPFYGREFGAALIQ----IGWL 56

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PVV + +  TG  +A Q     ++F AE     +++I   RE+G +L  +M+A R  S
Sbjct: 57  SLPVVGMTALFTGGALALQIYAGGARFNAETVVPSIVAIGLTRELGPVLGGLMVAARVAS 116

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           +I AEIG+MK+ E+IDA+ T+  + ++ L  PR+ A  +++P+L  + +   I+G  +V 
Sbjct: 117 SIAAEIGTMKVTEQIDALTTLSTNPMKYLTLPRVLAATLAVPVLVGVGDVLGIMGGFLVG 176

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
               D   A +        TL ++ +GLIK       + ++    G   G  +  +G+  
Sbjct: 177 VGRLDFGAATYLHNTLDFLTLWDVTSGLIKGAVFGFLVALMGCYFGMNSGRGAQGVGRAT 236

Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370
            + VV +  +++  + L    +F+
Sbjct: 237 KSAVVAASVLILASNYLLTELFFS 260


>gi|121609355|ref|YP_997162.1| hypothetical protein Veis_2398 [Verminephrobacter eiseniae EF01-2]
 gi|121553995|gb|ABM58144.1| protein of unknown function DUF140 [Verminephrobacter eiseniae
           EF01-2]
          Length = 260

 Score =  217 bits (552), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 130/264 (49%), Gaps = 8/264 (3%)

Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167
           +     +G  +   + D    A +L  ++   G  C      +        Q++++G   
Sbjct: 3   RQPIADLGFAVRSKLADIGMAARLLARLLLLAGAVCRRPALVR-------DQLHFLGNYS 55

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           + ++++     G V+  QG + L ++GA      L+++  +RE+G ++TA++ AGR+G++
Sbjct: 56  LAIIVVSGLFVGFVLGLQGYYTLQRYGASEALGLLVALSLVRELGPVVTALLFAGRAGTS 115

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + AEIG M+  E++ A+  M +D VR +++PR WA +I++PLL  + +   +IG ++V  
Sbjct: 116 LTAEIGLMRSGEQLSAMEMMAIDPVRRILAPRFWAGVIAMPLLAAMFSAVGVIGGAVVGV 175

Query: 288 KYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
               I    F+S+      +  ++  G++K+      +  VA+ +G+        + +  
Sbjct: 176 LMIGIDPGAFWSQMQGGVDIWRDLGNGVLKSLVFGFTVSFVALLQGYVARPTPEGVARAT 235

Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370
           T  VV +   V+ +D +     F+
Sbjct: 236 TRTVVLASLAVLALDFILTALMFS 259


>gi|254513828|ref|ZP_05125889.1| ABC transporter permease protein [gamma proteobacterium NOR5-3]
 gi|219676071|gb|EED32436.1| ABC transporter permease protein [gamma proteobacterium NOR5-3]
          Length = 369

 Score =  217 bits (552), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 165/366 (45%), Gaps = 16/366 (4%)

Query: 11  FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDT---IGAELIMYFMEKYHG 67
            AG+W +  +  +       +          VD++++T  D         +         
Sbjct: 17  IAGDWSAAVLPTLDSLFTTLLE---TEGPLKVDVTSVTVWDPRLEAKLLHLQRLAYAGQR 73

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
           +++L G      QLF L +               F   + ++    IG       +D   
Sbjct: 74  QLELLGTPDSQTQLFKLATAVAPYAGTAATSSGLFTLKNLRSTLADIG-------DDLLE 126

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               LG   S            +      I  +   G   + ++ L S + G ++A  GA
Sbjct: 127 SLEFLGATTSAVLRTLLGRSGMRR--REFIESLAQAGPQAMGIITLTSVLVGMILAYLGA 184

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL QFGA +F  DL++I  LRE+G L+TA+++AGR+G+A  A++ +M+ NEEIDAI T+
Sbjct: 185 AQLQQFGAAVFVADLVAIGMLREMGALMTAIVMAGRTGAAYAAQLSTMQTNEEIDAITTL 244

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++ +  L+ PR+ AL++ +PLL + A+   I+G ++V       P   + S+  S  T+
Sbjct: 245 GINPLEFLVVPRMLALLLMMPLLVVYADALGIVGGAVVAGGMGVTPLQ-YISQLDSAITI 303

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   G++K    A  I I   + G   G +S ++G+  T  VV ++  +I+ D+   I 
Sbjct: 304 THFLVGVVKGLIFALLIAIAGCRAGMNAGRNSEAVGRATTEAVVTAVVYLIVADAAINIL 363

Query: 368 YFAIGI 373
              +GI
Sbjct: 364 CQLLGI 369


>gi|58697152|ref|ZP_00372577.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|58698663|ref|ZP_00373555.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58699132|ref|ZP_00373959.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|225630652|ref|YP_002727443.1| hypothetical protein WRi_009360 [Wolbachia sp. wRi]
 gi|58534353|gb|EAL58525.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58534816|gb|EAL58923.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58536541|gb|EAL59904.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|225592633|gb|ACN95652.1| hypothetical protein WRi_009360 [Wolbachia sp. wRi]
          Length = 260

 Score =  216 bits (551), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 7/259 (2%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    IG+  + F+    S        + +             +  ++ RQ+  +G   +
Sbjct: 7   NSVRIIGRYFINFLLRLGSAFIFFIQSLYHCLV-------PPYYFSNVARQIIEIGFFSL 59

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
           P+V L     GA I  Q +        E     L++I  ++E+G +L ++++ G+ GS++
Sbjct: 60  PIVGLTGVFIGAAIVLQSSLSDPLINQEQIIPKLVTITIIKELGPVLISLIMVGKVGSSV 119

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG+M+I E+IDA+ T+ ++  + LI+PRI A II  P+LT+ A+   I G  I    
Sbjct: 120 AAEIGTMRITEQIDALTTLNINPFKYLIAPRILASIIVFPILTVCADLIGIFGGCITAVF 179

Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
            ++    ++           +  TGLIKA      I + +   G+     +  +G   T+
Sbjct: 180 EFNHNLNIYIKHTAQFFNTYDFITGLIKATVFGAIISVSSCYYGYHCKEGARGVGVATTS 239

Query: 349 CVVQSISIVIIIDSLFAIF 367
            VV S  ++I+ + +  + 
Sbjct: 240 TVVLSSILIILANYMITLI 258


>gi|300690218|ref|YP_003751213.1| hypothetical protein RPSI07_0537 [Ralstonia solanacearum PSI07]
 gi|299077278|emb|CBJ49904.1| conserved membrane protein of unknown function, DUF140 [Ralstonia
           solanacearum PSI07]
          Length = 255

 Score =  216 bits (551), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 61/262 (23%), Positives = 127/262 (48%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG  +   I+     A +L  ++    +              +I Q+ ++G     
Sbjct: 1   MISSIGFLVRVLISRLGYAARMLVALVGAWRDVLRRP-------RLVIEQLRFIGNDSFI 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK NEE+ A+  M +D +  +++PR W   I++PLL  + +   ++G   V    
Sbjct: 114 AEIGLMKANEELIAMEMMAVDPLARVLAPRFWGGFIAMPLLAAIFSAVGVLGGYFVGVGL 173

Query: 290 YDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+  +    + ++  G+IK+     A+  VA+ +G+        + +  T 
Sbjct: 174 IGVDAGAFWSQMQAGVDVVDDVLNGVIKSVVFGVAVTFVALYQGYEAKATPEGVARATTR 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D +     F+
Sbjct: 234 TVVIASLAVLALDFVLTALMFS 255


>gi|241758953|ref|ZP_04757065.1| ABC transport inner membrane subunit [Neisseria flavescens SK114]
 gi|241320774|gb|EER57007.1| ABC transport inner membrane subunit [Neisseria flavescens SK114]
          Length = 258

 Score =  216 bits (551), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 73/262 (27%), Positives = 132/262 (50%), Gaps = 8/262 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G K + FI    S       +++ +G   A            IRQ+Y+ GV  V
Sbjct: 2   NFIRSVGAKTLGFIQSLGSITLFFLQILAKSGTAFARP-------RLSIRQVYFAGVLSV 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            +V +     G V+  QG  QL++F +      +++   LRE+G +L A++ A  +G A+
Sbjct: 55  LIVAVSGLFVGMVLGLQGYTQLAKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAM 114

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            +EIG MK  E+++A+  M +D V  +++PR WA + S+PLL  + N + I GA +V  +
Sbjct: 115 TSEIGLMKTTEQLEAMNVMAVDPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVE 174

Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +   +F+S+  +  T   ++  GLIK+     A+ ++A+ +GF     S  + +  T
Sbjct: 175 WLGLDGGIFWSQMQNNITFHYDVLNGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRAST 234

Query: 348 TCVVQSISIVIIIDSLFAIFYF 369
             VV S   ++ +D +   + F
Sbjct: 235 RTVVSSALTILAVDFMLTAWMF 256


>gi|167564342|ref|ZP_02357258.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           oklahomensis EO147]
 gi|167571490|ref|ZP_02364364.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           oklahomensis C6786]
          Length = 255

 Score =  216 bits (551), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 56/262 (21%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +     +   V+                   + +Q++++G     
Sbjct: 1   MISAIGRFVLGGLERTGYATRMFVRVVLEFFSLLRRP-------RLVTKQVHFLGNYSFV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G +++A++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVSALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D ++ +I+PR+WA +I++PLL  + +   ++G  +V    
Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPLKNVIAPRMWAGVIAMPLLAAIFSAVGVLGGYVVGVLL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+      +  ++  G++K+     A+  +A+ +G+        +    T 
Sbjct: 174 IGVDPGAFWSQMQGGVEVWADVGNGVLKSVVFGFAVTFIALFQGYEAKPTPEGVSHATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVYASLAVLGLDFLLTALMFS 255


>gi|260753847|ref|YP_003226740.1| hypothetical protein Za10_1620 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|283856508|ref|YP_163326.2| hypothetical protein ZMO1591 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|258553210|gb|ACV76156.1| protein of unknown function DUF140 [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|283775512|gb|AAV90215.2| protein of unknown function DUF140 [Zymomonas mobilis subsp.
           mobilis ZM4]
          Length = 273

 Score =  216 bits (551), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 64/260 (24%), Positives = 120/260 (46%), Gaps = 7/260 (2%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170
              IG+  + F+      A   G+ I   G           +      + + +G + +PV
Sbjct: 21  LAAIGRLFIAFLAGIGRIARF-GMTILLRGAL------PPYYPGRFFHEFFEIGWNSLPV 73

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           V L +  TG+ +AQQ     S+F A+      + I  +RE+G +L  +M+ GR  SAI A
Sbjct: 74  VALTAVFTGSALAQQVYAAASRFSAQSTVPAAVVIGMVRELGPVLVGLMVVGRVTSAIAA 133

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           E+G+M++ E+IDA+ T+  D  R L++PR++A  ++LP L +LAN   I G  ++     
Sbjct: 134 ELGAMRVTEQIDAMETLHTDPYRYLLAPRLYAATLALPFLVMLANVIGIFGGYLLSISKL 193

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
                 +           ++   L+K+      + ++    GF     +  +G+  T  V
Sbjct: 194 GFNPENYLKVTREFLKAEDVHMALVKSAVFGFLVALLGCYNGFFATGGAAGVGRSTTRAV 253

Query: 351 VQSISIVIIIDSLFAIFYFA 370
           V +  +++  + +  +F+F 
Sbjct: 254 VSAFIMILFSNLMITMFFFG 273


>gi|184159620|ref|YP_001847959.1| ABC transporter [Acinetobacter baumannii ACICU]
 gi|294842631|ref|ZP_06787314.1| ABC-type transport system [Acinetobacter sp. 6014059]
 gi|183211214|gb|ACC58612.1| ABC-type transport system [Acinetobacter baumannii ACICU]
 gi|322509530|gb|ADX04984.1| ttg2B [Acinetobacter baumannii 1656-2]
 gi|323519550|gb|ADX93931.1| ABC-type transport system [Acinetobacter baumannii TCDC-AB0715]
          Length = 258

 Score =  216 bits (551), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 70/263 (26%), Positives = 130/263 (49%), Gaps = 9/263 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G+ +++ I      A +L  +I +            G     + QM+ VGV  +
Sbjct: 2   NTIAWLGRLVIERIRGIGVAALMLLQIIFSLPSA--------GGFGRFVYQMHRVGVMSL 53

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG   L   G+E     ++S+  LRE+  ++ A++ AGR+GSA+
Sbjct: 54  LIITVSGLFIGLVLGLQGYSILVNVGSESMLGTMVSLTLLRELAPVVAALLFAGRAGSAL 113

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIGSMK +E++ ++  +G+D ++ ++SPR+WA I+SLP+LT++     I+G  +V   
Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIVGGKLVGVD 173

Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +    F+S   +      ++  G+IK+   A     +A+ +G+A       +   +T
Sbjct: 174 FLGVDEGSFWSGMQNNVQFGHDVVNGIIKSIVFALLCTWIAVFQGYACEPTPEGIATAMT 233

Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370
             VV S   V+  D +     F 
Sbjct: 234 RTVVYSSLCVLGFDFVLTAVMFG 256


>gi|226939988|ref|YP_002795061.1| ABC transport system permease protein [Laribacter hongkongensis
           HLHK9]
 gi|226714914|gb|ACO74052.1| probable ABC transport system permease protein [Laribacter
           hongkongensis HLHK9]
          Length = 261

 Score =  216 bits (551), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 69/267 (25%), Positives = 131/267 (49%), Gaps = 8/267 (2%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
            +        IG +I++ +         L  ++ ++G                IR++Y+ 
Sbjct: 2   LDGILKAVAGIGHRIIEGVWRLGFALRFLAAIVRHSGTALLR-------FQLTIREIYFA 54

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           GV  + ++++     G V+  QG   L +FG+      L+++  LRE+G +L A++ A R
Sbjct: 55  GVLSLIIIVVSGTFVGMVLGLQGYTTLMRFGSADALGGLVALSLLRELGPVLAAILFASR 114

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           SGSA+ AEIG MK  E++DA+  M ++ V  +++PR WA ++S+PLL  L +   I G  
Sbjct: 115 SGSAMTAEIGLMKATEQLDAMAVMAVNPVARVVAPRFWAGVLSMPLLAALFSVMGIFGGY 174

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
            V      +    ++S+  +  +L  ++  G+IK+     A+ ++A+ EG+     +  +
Sbjct: 175 FVGVVMIGLDHGAYWSQMQAAVSLHEDVINGIIKSGVFGVAVTLIAVFEGYDAQPTAAGV 234

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYF 369
               T  VV S  +++ +D +   F F
Sbjct: 235 SAATTRTVVTSALVILALDFVLTAFMF 261


>gi|119897098|ref|YP_932311.1| hypothetical protein azo0807 [Azoarcus sp. BH72]
 gi|119669511|emb|CAL93424.1| conserved hypothetical membrane protein [Azoarcus sp. BH72]
          Length = 263

 Score =  216 bits (550), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 59/266 (22%), Positives = 129/266 (48%), Gaps = 8/266 (3%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
           +        +G   +  +         L +V+  +G+     +         +R++Y+ G
Sbjct: 2   SGLVAALRRLGGMSIDAVWRLGFATRFLLMVLVYSGQSVRRIH-------LTLREIYFAG 54

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
           V  + ++++     G V+  QG   L +FG+      L+++   RE+G ++ A++ A R+
Sbjct: 55  VLSLLIILVSGLFVGLVLGLQGYETLQRFGSSDALGVLVALSLTRELGPVVAALLFASRA 114

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           GSA+ AEIG MK  E++ A+  M ++ +  +++PR W  +IS+PLL  + +   + G  +
Sbjct: 115 GSAVTAEIGLMKATEQLKAMDMMAVNPLARVVAPRFWGGVISMPLLAAMFSAMGVFGGWL 174

Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           +   +  +    F+S+  +   +  ++  G+IK+     A+ ++A+ EG+     +  + 
Sbjct: 175 IGVVFIGVDDGAFWSQMQAAVDVRYDVLNGVIKSFVFGVAVSLIAVFEGYDCTPTAEGVS 234

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYF 369
           + +T  VV S   ++ +D +   F F
Sbjct: 235 RAITRTVVSSALAILALDFVLTSFMF 260


>gi|300865432|ref|ZP_07110232.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300336571|emb|CBN55382.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 274

 Score =  216 bits (550), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 65/239 (27%), Positives = 111/239 (46%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
               I   G+     +       + + QM  VG   + + ++ +   G V   Q A +  
Sbjct: 24  FLAAILLGGQVTLHLFTRTIHRRNTLDQMVAVGPESLLIALVTAGFVGMVFTIQVAREFI 83

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
             G       ++++   RE+G +LTAV+IAGR GSA  AEIG+M++ E+IDA+  +  D 
Sbjct: 84  ALGVTNAVGGVLAVSLARELGPVLTAVIIAGRVGSAFAAEIGTMQVTEQIDALYILKTDP 143

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           +  L+ PR+ A  + LP+LTIL+  + + G  ++  + Y +P  VF     +  T  +I 
Sbjct: 144 IDYLVIPRVIACCLMLPILTILSLVTGMAGGLLIATRMYGVPPVVFLESARNFLTPWDIC 203

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
              IKA      I ++    G      +  +G+  TT VV S+  + I +   +   F 
Sbjct: 204 APAIKAFVFGALIAVIGTSWGLTTTGGAKGVGQSTTTAVVTSMLAIFICNFFLSWLMFQ 262


>gi|326405357|ref|YP_004285439.1| putative ABC transporter permease [Acidiphilium multivorum AIU301]
 gi|325052219|dbj|BAJ82557.1| putative ABC transporter permease protein [Acidiphilium multivorum
           AIU301]
          Length = 260

 Score =  216 bits (550), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 65/253 (25%), Positives = 123/253 (48%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +     +LG +        +   +    L +  R +  +G S +PVV L +  
Sbjct: 8   IAALGRLALGFVIMLGELALFAAAGLSGLVRPPFHLRNFGRALMEIGYSSLPVVALTAVF 67

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG V+A Q     S+F +      ++ +   RE+G +L  +M+AGR+GSAI AE+G+M++
Sbjct: 68  TGMVLALQSYIGFSRFDSSSVIASVVVLSLTRELGPVLAGLMVAGRAGSAIAAEMGTMRV 127

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            ++IDA+ T+  D +R L++PR+ A +I+LPLL ++A+   + G  +V           +
Sbjct: 128 TDQIDALTTLATDPMRYLVTPRLLAGVIALPLLVVIADILGVAGGFLVSTVRLGFEPNAY 187

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                +     ++ +GL+KA      I ++    G+     +  +G   T  VV +  ++
Sbjct: 188 LRDTVNYLHSNDVVSGLVKAAVFGFVIALMGCFHGYRSRGGAQGVGGATTAAVVSASVLI 247

Query: 358 IIIDSLFAIFYFA 370
           + +D L    +F+
Sbjct: 248 LALDYLMTQAFFS 260


>gi|148261852|ref|YP_001235979.1| hypothetical protein Acry_2870 [Acidiphilium cryptum JF-5]
 gi|146403533|gb|ABQ32060.1| protein of unknown function DUF140 [Acidiphilium cryptum JF-5]
          Length = 260

 Score =  216 bits (550), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 65/253 (25%), Positives = 123/253 (48%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +     +LG +        +   +    L +  R +  +G S +PVV L +  
Sbjct: 8   IAALGRLALGFVIMLGELALFAAAGLSGLVRPPFHLRNFGRALMEIGYSSLPVVALTAVF 67

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG V+A Q     S+F +      ++ +   RE+G +L  +M+AGR+GSAI AE+G+M++
Sbjct: 68  TGMVLALQSYVGFSRFDSSSVIASVVVLSLTRELGPVLAGLMVAGRAGSAIAAEMGTMRV 127

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            ++IDA+ T+  D +R L++PR+ A +I+LPLL ++A+   + G  +V           +
Sbjct: 128 TDQIDALTTLATDPMRYLVTPRLLAGVIALPLLVVIADILGVAGGFLVSTVRLGFEPNAY 187

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                +     ++ +GL+KA      I ++    G+     +  +G   T  VV +  ++
Sbjct: 188 LRDTVNYLHSNDVVSGLVKAAVFGFVIALMGCFHGYRSRGGAQGVGGATTAAVVSASVLI 247

Query: 358 IIIDSLFAIFYFA 370
           + +D L    +F+
Sbjct: 248 LALDYLMTQAFFS 260


>gi|194290964|ref|YP_002006871.1| hypothetical protein RALTA_A2885 [Cupriavidus taiwanensis LMG
           19424]
 gi|193224799|emb|CAQ70810.1| conserved hypothetical protein, DUF140; Putative abc-type
           transporter, membrane component [Cupriavidus taiwanensis
           LMG 19424]
          Length = 259

 Score =  216 bits (550), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 59/265 (22%), Positives = 130/265 (49%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
                  IG  + + I+       +   V++ +                +  Q+++VG  
Sbjct: 1   MTGFFSAIGAAVRRSISGLGHATRMFLAVLALSPALLRR-------FRLVTDQVFFVGNL 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+
Sbjct: 54  SLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGT 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           ++ AEIG MK  E++ A+  M ++ ++ +++PR WA +I++P+L  + +   I+G  +V 
Sbjct: 114 SLTAEIGLMKAGEQLTAMEMMAVNPLQRVVAPRFWAGVIAMPVLAAIFSAVGILGGYVVG 173

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
            +   +    F+S+      +  ++  G+IK+     A+  +A+ +GF        + + 
Sbjct: 174 VQLIGVDAGAFWSQMQGGVDVRADVLNGVIKSFIFGIAVTFIALYQGFEARPTPEGVSRA 233

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV +   V+ +D L     F+
Sbjct: 234 TTRTVVIASLAVLGLDFLLTALMFS 258


>gi|42520801|ref|NP_966716.1| hypothetical protein WD0989 [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|42410541|gb|AAS14650.1| membrane protein, putative [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 260

 Score =  215 bits (549), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 7/259 (2%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    IG+  + F+    S        + +             +  ++ RQ+  +G   +
Sbjct: 7   NSVRIIGRYFINFLLRLGSAFIFFIQSLYHCLV-------PPYYFSNIARQIIEIGFFSL 59

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
           P+V L     GA I  Q +        E     L++I  ++E+G +L ++++ G+ GS++
Sbjct: 60  PIVGLTGVFIGAAIVLQSSLSDPSINQEQIIPKLVTITIIKELGPVLISLIMVGKVGSSV 119

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG+M+I E+IDA+ T+ ++  + LI+PRI A II  P+LT+ A+   I G  I    
Sbjct: 120 AAEIGTMRITEQIDALTTLNINPFKYLIAPRILASIIVFPILTVCADLIGIFGGCITAVF 179

Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
            ++    ++           +  TGLIKA      I + +   G+     +  +G   T+
Sbjct: 180 EFNHNLNIYIKHTAQFFNTYDFITGLIKATAFGAIISVSSCYYGYHCKEGARGVGVATTS 239

Query: 349 CVVQSISIVIIIDSLFAIF 367
            VV S  ++I+ + +  + 
Sbjct: 240 TVVLSSILIILANYMITLI 258


>gi|323140905|ref|ZP_08075818.1| hypothetical protein HMPREF9443_00583 [Phascolarctobacterium sp.
           YIT 12067]
 gi|322414643|gb|EFY05449.1| hypothetical protein HMPREF9443_00583 [Phascolarctobacterium sp.
           YIT 12067]
          Length = 283

 Score =  215 bits (549), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 69/216 (31%), Positives = 115/216 (53%)

Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
             ++RQM  +G   +P+V++    TG V + Q A +  + GA      +++I   RE+  
Sbjct: 67  KEVVRQMALLGADSLPIVMMTILCTGMVFSVQTAKEFVRLGASSSVGGIVAIAMARELVP 126

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           +LT V++AGR G+AI AE+G+MK+ E+IDA+R M  + V  L+ PR  AL++ +P+L + 
Sbjct: 127 VLTGVVVAGRIGAAIAAELGTMKVTEQIDALRVMAANPVSYLVVPRFIALVLMMPVLVVF 186

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
           ANF   IG  +V   Y  I    + +   + A   ++F G++K+      I IV   +G 
Sbjct: 187 ANFIGNIGGWVVAHYYAGIGSFTYENSIRTLAEFYDVFGGMVKSCVFGAIIAIVGCYKGL 246

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
                +  +G   T  VV SI +V I +   +I  +
Sbjct: 247 NAPNGAEGVGLATTASVVLSIILVFITNYFLSIVLY 282


>gi|169632329|ref|YP_001706065.1| toluene tolerance efflux ABC transporter membrane protein
           [Acinetobacter baumannii SDF]
 gi|239503256|ref|ZP_04662566.1| toluene tolerance efflux ABC transporter membrane protein
           [Acinetobacter baumannii AB900]
 gi|260549862|ref|ZP_05824078.1| toluene tolerance efflux transporter [Acinetobacter sp. RUH2624]
 gi|169151121|emb|CAO99787.1| toluene tolerance efflux transporter (ABC superfamily, membrane)
           [Acinetobacter baumannii]
 gi|193078493|gb|ABO13499.2| toluene tolerance efflux transporter [Acinetobacter baumannii ATCC
           17978]
 gi|260407112|gb|EEX00589.1| toluene tolerance efflux transporter [Acinetobacter sp. RUH2624]
          Length = 258

 Score =  215 bits (549), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 70/263 (26%), Positives = 130/263 (49%), Gaps = 9/263 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G+ +++ I      A +L  +I +            G     + QM+ VGV  +
Sbjct: 2   NTIAWLGRLVIERIRGIGVAALMLLQIIFSLPSA--------GGFGRFVYQMHRVGVMSL 53

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG   L   G+E     ++S+  LRE+  ++ A++ AGR+GSA+
Sbjct: 54  LIITVSGLFIGLVLGLQGYSILVNVGSESMLGTMVSLTLLRELAPVVAALLFAGRAGSAL 113

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIGSMK +E++ ++  +G+D ++ ++SPR+WA I+SLP+LT++     I+G  +V   
Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIVGGKLVGVD 173

Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +    F+S   +      ++  G+IK+   A     +A+ +G+A       +   +T
Sbjct: 174 FLGVDEGSFWSGMQNNVQFGHDVVNGIIKSIVFALLCTWIAVFQGYACDPTPEGIATAMT 233

Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370
             VV S   V+  D +     F 
Sbjct: 234 RTVVYSSLCVLGFDFVLTAVMFG 256


>gi|126727195|ref|ZP_01743032.1| ABC transporter, inner membrane subunit [Rhodobacterales bacterium
           HTCC2150]
 gi|126703623|gb|EBA02719.1| ABC transporter, inner membrane subunit [Rhodobacterales bacterium
           HTCC2150]
          Length = 258

 Score =  215 bits (549), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 61/253 (24%), Positives = 115/253 (45%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +      +      +G V            +   ++    + +  +G   +PVV L + 
Sbjct: 4   ALATLGQSTLGLLAAIGRVCLFAFSVVTHMLRPPFYIREFSQALLNIGFFSLPVVGLTAL 63

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
            TG  +A Q     ++F AE     ++SI  +RE+G +L+ +M+AGR  ++I AE+ SMK
Sbjct: 64  FTGGALALQIYAGGARFNAEAVVPSIVSIGMVRELGPVLSGLMVAGRVSASIAAELASMK 123

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           + E+IDA+ T+  + ++ L  PR+ A  ++LP+L  + +   I G  +V     D   A 
Sbjct: 124 VTEQIDALVTLSSNPLKYLAVPRVLAATLTLPILVAVGDSIGIFGGYLVGVNSLDFNAAG 183

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +     +   L ++ +GLIK       + I+    G   G  +  +G+     VV S  +
Sbjct: 184 YLKNTVTFLELWDVTSGLIKGAVFGFILSIMGCYHGMNSGRGAQGVGRATINAVVSSSIL 243

Query: 357 VIIIDSLFAIFYF 369
           ++  + L    +F
Sbjct: 244 ILAANYLLTSLFF 256


>gi|255067843|ref|ZP_05319698.1| toluene tolerance ABC efflux transporter, permease [Neisseria sicca
           ATCC 29256]
 gi|255047934|gb|EET43398.1| toluene tolerance ABC efflux transporter, permease [Neisseria sicca
           ATCC 29256]
          Length = 258

 Score =  215 bits (549), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 73/262 (27%), Positives = 131/262 (50%), Gaps = 8/262 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G K + FI    S    L  +++ +G                +RQ+Y+ GV  V
Sbjct: 2   NFIRSVGAKTLGFIQSLGSITLFLLNILAKSGTAFVRP-------RLSVRQVYFAGVLSV 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            +V +     G V+  QG  QLS+F +      +++   LRE+G +L A++ A  +G A+
Sbjct: 55  LIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAM 114

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            +EIG MK  E+++A+  M ++ V  +++PR WA + S+PLL  + N + I GA +V   
Sbjct: 115 TSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVT 174

Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +   +F+S+  +  T+  ++  GLIK+     A+ ++A+ +GF     S  + +  T
Sbjct: 175 WLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRAST 234

Query: 348 TCVVQSISIVIIIDSLFAIFYF 369
             VV S   ++ ID +     F
Sbjct: 235 RTVVSSALTILAIDFVLTALMF 256


>gi|261364829|ref|ZP_05977712.1| toluene tolerance ABC efflux transporter, permease [Neisseria
           mucosa ATCC 25996]
 gi|288566867|gb|EFC88427.1| toluene tolerance ABC efflux transporter, permease [Neisseria
           mucosa ATCC 25996]
          Length = 258

 Score =  215 bits (549), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 73/262 (27%), Positives = 131/262 (50%), Gaps = 8/262 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G K + FI    S    L  +++ +G                +RQ+Y+ GV  V
Sbjct: 2   NFIRSVGAKTLGFIQSLGSITLFLLNILAKSGTAFVRP-------RLSVRQVYFAGVLSV 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            +V +     G V+  QG  QLS+F +      +++   LRE+G +L A++ A  +G A+
Sbjct: 55  LIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAM 114

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            +EIG MK  E+++A+  M ++ V  +++PR WA + S+PLL  + N + I GA +V   
Sbjct: 115 TSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVT 174

Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +   +F+S+  +  T+  ++  GLIK+     A+ ++A+ +GF     S  + +  T
Sbjct: 175 WLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRAST 234

Query: 348 TCVVQSISIVIIIDSLFAIFYF 369
             VV S   ++ ID +     F
Sbjct: 235 RTVVSSALTILAIDFVLTALMF 256


>gi|148263316|ref|YP_001230022.1| hypothetical protein Gura_1245 [Geobacter uraniireducens Rf4]
 gi|146396816|gb|ABQ25449.1| protein of unknown function DUF140 [Geobacter uraniireducens Rf4]
          Length = 257

 Score =  215 bits (549), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 66/246 (26%), Positives = 121/246 (49%), Gaps = 1/246 (0%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   S    +    + +     S      +      Q+  +GV  + +VIL    TG V+
Sbjct: 8   NTLKSFLLEVQEFFTLSLRAVRSIVSPPYYYRDFTTQLDKIGVGSLFIVILTGLFTGMVM 67

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A Q   QL  F A  +   ++++  ++E+G +L+A+M+ GR GSAI AEIG+M + E+ID
Sbjct: 68  ALQALIQLKPFAATSYVGGMVAVTMIKELGPVLSALMVTGRVGSAITAEIGTMVVTEQID 127

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R  G D V+ L++ R+ A+++++PLLTI+ +  +++G  I+    YD+   +++    
Sbjct: 128 AMRVEGTDIVKRLVTSRLKAILVAMPLLTIITDAISLLGGYIMSAS-YDMNPIMYWKSIP 186

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
                 ++  G+ K  F    I ++    GF     +  +G      VV S  I+++ D 
Sbjct: 187 QFMVFQDLIEGVAKPAFFGFVIAMIGCHVGFNTRGGAEGVGASAKRAVVISSVIILVSDF 246

Query: 363 LFAIFY 368
                +
Sbjct: 247 FLTKIF 252


>gi|225077106|ref|ZP_03720305.1| hypothetical protein NEIFLAOT_02159 [Neisseria flavescens
           NRL30031/H210]
 gi|224951663|gb|EEG32872.1| hypothetical protein NEIFLAOT_02159 [Neisseria flavescens
           NRL30031/H210]
          Length = 258

 Score =  215 bits (549), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 72/262 (27%), Positives = 131/262 (50%), Gaps = 8/262 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G K + FI    S       +++ +G                IRQ+Y+ GV  V
Sbjct: 2   NFIRSVGAKTLGFIQSLGSITLFFLHILAKSGTAFTRP-------RLSIRQVYFAGVLSV 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            +V +     G V+  QG  QL++F +      +++   LRE+G +L A++ A  +G A+
Sbjct: 55  LIVAVSGLFVGMVLGLQGYTQLAKFKSADVLGYMVAASLLRELGPVLAAILFASSAGGAM 114

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            +EIG MK  E+++A+  M +D V  +++PR WA + S+PLL  + N + I GA +V  +
Sbjct: 115 TSEIGLMKTTEQLEAMNVMAVDPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVE 174

Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +   +F+S+  +  T   ++  GLIK+     A+ ++A+ +GF     S  + +  T
Sbjct: 175 WLGLDGGIFWSQMQNNITFHYDVLNGLIKSAAFGVAVTLIAVHQGFHCVSTSEGILRAST 234

Query: 348 TCVVQSISIVIIIDSLFAIFYF 369
             VV S   ++ +D +   + F
Sbjct: 235 RTVVSSSLTILAVDFMLTAWMF 256


>gi|241762420|ref|ZP_04760498.1| protein of unknown function DUF140 [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|241373014|gb|EER62672.1| protein of unknown function DUF140 [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 273

 Score =  215 bits (548), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 64/260 (24%), Positives = 120/260 (46%), Gaps = 7/260 (2%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170
              IG+  + F+      A   G+ I   G           +      + + +G + +PV
Sbjct: 21  LAAIGRLFIAFLAGIGRIARF-GITILLRGAL------PPYYPGRFFHEFFEIGWNSLPV 73

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           V L +  TG+ +AQQ     S+F A+      + I  +RE+G +L  +M+ GR  SAI A
Sbjct: 74  VALTAVFTGSALAQQVYAAASRFSAQSTVPAAVVIGMVRELGPVLVGLMVVGRVTSAIAA 133

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           E+G+M++ E+IDA+ T+  D  R L++PR++A  ++LP L +LAN   I G  ++     
Sbjct: 134 ELGAMRVTEQIDAMETLHTDPYRYLLAPRLYAATLALPFLVMLANVIGIFGGYLLSISKL 193

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
                 +           ++   L+K+      + ++    GF     +  +G+  T  V
Sbjct: 194 GFNPENYLKVTREFLKAEDVHMALVKSTVFGFLVALLGCYNGFFATGGAAGVGRSTTRAV 253

Query: 351 VQSISIVIIIDSLFAIFYFA 370
           V +  +++  + +  +F+F 
Sbjct: 254 VSAFIMILFSNLMITMFFFG 273


>gi|190571416|ref|YP_001975774.1| hypothetical protein WPa_1028 [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|190357688|emb|CAQ55136.1| Putative membrane protein [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
          Length = 260

 Score =  215 bits (548), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 59/251 (23%), Positives = 115/251 (45%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +        +    +G       +     +    +  ++ RQ+  +G   +P+V L   
Sbjct: 8   SVRIIGRCFMNFLLRIGNAFVFFIQSLYHCFIPPYYFSNVARQIIEIGFFSLPIVGLTGV 67

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             GAVI  Q +        E     L++I  ++E+G +L ++++ G+ GS+I AEIG+M+
Sbjct: 68  FIGAVIVLQSSLSGILINQEQVVPKLVTITIIKELGPVLISLIMVGKVGSSIAAEIGTMR 127

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           I E+IDA+ T+ ++  + LI PRI A +I  P+LT+ A+   I G  +     ++    +
Sbjct: 128 ITEQIDALTTLDINPFKYLIVPRILASVIVFPILTVCADLIGIFGGYVTAVFEFNHNLNI 187

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +         + +   GL+KA      I + +   G+     +  +G   T+ VV S  +
Sbjct: 188 YIKYTAQFFNMYDFIVGLMKATAFGAIISVSSCYYGYHCREGARGVGIATTSTVVISSIL 247

Query: 357 VIIIDSLFAIF 367
           +I+ + L  + 
Sbjct: 248 IILANYLITLI 258


>gi|221638873|ref|YP_002525135.1| ABC transporter inner membrane subunit [Rhodobacter sphaeroides
           KD131]
 gi|221159654|gb|ACM00634.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides
           KD131]
          Length = 260

 Score =  215 bits (548), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 59/264 (22%), Positives = 119/264 (45%), Gaps = 7/264 (2%)

Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
           S       +G+  +            +G +    G   +  ++   +   L+  +  +G 
Sbjct: 2   SAAAPIAALGRATL-------GMLAAVGRIALFAGAVVSHLFRPPFYPRELLTALIQIGW 54

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             +PVV L +  TG  +A Q     ++F AE     +++I   RE+G +L  +M+A R  
Sbjct: 55  LSLPVVGLTAIFTGGALALQIYAGGARFSAEAVVPSIVAIGMTRELGPVLGGLMVAARVA 114

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           S+I AEIG+MK+ E+IDA+ T+  + ++ L  PR+ A  +++P+L  + +   I G  +V
Sbjct: 115 SSIAAEIGTMKVTEQIDALVTLSTNPLKYLAVPRVLAATLAVPILVAVGDSIGIAGGWLV 174

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                D   A +         + ++ +GL+K       + ++    G   G  +  +G+ 
Sbjct: 175 GVNRLDFNSATYIKNTTDFLEVWDVGSGLVKGAAFGFIVALMGCYHGMNSGRGAQGVGRA 234

Query: 346 VTTCVVQSISIVIIIDSLFAIFYF 369
             + VV +  +++  + L    +F
Sbjct: 235 TKSAVVAASVLILAANYLLTEVFF 258


>gi|153004838|ref|YP_001379163.1| hypothetical protein Anae109_1976 [Anaeromyxobacter sp. Fw109-5]
 gi|152028411|gb|ABS26179.1| protein of unknown function DUF140 [Anaeromyxobacter sp. Fw109-5]
          Length = 250

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 65/243 (26%), Positives = 116/243 (47%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +    LG ++   GE    + +    L  ++ QM ++GV    +V +     G V A 
Sbjct: 4   LKAGLEDLGRMLMFAGEMVGWAVRPPFRLELVLAQMAFIGVGSAFIVGVTGTFAGMVFAL 63

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q  F + QF AE +    ++    RE+  + TA+M+ GRSGSAI  E+G+M++ E+IDA+
Sbjct: 64  QMNFAMKQFAAEGYVGGSVAFSLARELSPVFTALMVTGRSGSAIATELGTMRVTEQIDAM 123

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            +M ++ ++ L+ PR+ A +I  P LT+L N     G  ++      IP   + +     
Sbjct: 124 ESMAVNPIQYLVVPRVIASLIMFPFLTMLFNSLGYAGGFVMGVYVAGIPIGPYLAHTQEF 183

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             + +I  GL KA      + ++    G+A    +  +G+  T  VV S   +++ D + 
Sbjct: 184 MDVGDILHGLFKAVVFGLIVSVITTWRGYAAFGGAKGVGEGTTRGVVASSITILLADYVI 243

Query: 365 AIF 367
              
Sbjct: 244 TFI 246


>gi|298491186|ref|YP_003721363.1| hypothetical protein Aazo_2257 ['Nostoc azollae' 0708]
 gi|298233104|gb|ADI64240.1| protein of unknown function DUF140 ['Nostoc azollae' 0708]
          Length = 265

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 69/239 (28%), Positives = 118/239 (49%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           L   I   G+      K K    + + Q+  VG   + + +L +   GAV   Q A +  
Sbjct: 17  LLAAILLGGQVIVHLMKGKIHRRNTLEQLAAVGPDSLFIALLTAVFVGAVFTIQVAREFI 76

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            FGA      ++++   RE+  +LTAV++AGR GSA  AEIG+M++ E+IDA+  +  D 
Sbjct: 77  NFGAGNLVGGVLAVALTRELTPVLTAVILAGRVGSAFAAEIGTMRVTEQIDALLILKTDP 136

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           +  L+ PRI A ++ LP+LT+L+  + + G  I+    Y++   VF     +   + +I 
Sbjct: 137 IDYLVIPRIIACLLMLPILTLLSLLAGMFGGLIIATHIYNLSDTVFLDSARNFLDIWDIC 196

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           + +IKA      I I+    G      +  +G+  TT VV ++ I+ I +   +   F 
Sbjct: 197 SAMIKAGCFGVLIAIIGCSWGLTTTGGAKGVGQSTTTAVVTALLIIFISNFFLSWLMFQ 255


>gi|57238787|ref|YP_179923.1| hypothetical protein Erum0570 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58578712|ref|YP_196924.1| hypothetical protein ERWE_CDS_00480 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58616774|ref|YP_195973.1| hypothetical protein ERGA_CDS_00470 [Ehrlichia ruminantium str.
           Gardel]
 gi|57160866|emb|CAH57768.1| putative integral membrane protein [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58416386|emb|CAI27499.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel]
 gi|58417338|emb|CAI26542.1| Conserved hypothetical protein [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 265

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 64/267 (23%), Positives = 119/267 (44%), Gaps = 7/267 (2%)

Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY 161
             YN    L   IGK  +  + +           + +             +   + +Q  
Sbjct: 5   PLYNKLCWLFQSIGKYAIVLVFNIGDAFIFFIRFVYHCLC-------PPYYYCVIWKQFI 57

Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221
            +    +P+V + +  TGAV+  Q A  ++   +  F   ++ +  +RE+G +L  ++IA
Sbjct: 58  EIFFFSLPIVGVTAIFTGAVLILQNALIINTNVSNDFIAGVVVVAIVRELGPVLIGLIIA 117

Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281
           GR G++I AEIG+M+I E+IDA+ T+  +  + L+ PR+ A +IS+P+L + A+     G
Sbjct: 118 GRVGASIAAEIGTMRITEQIDALFTLNTNPFKYLVVPRVIAAMISMPILILCADLIGSYG 177

Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341
             IV          ++           ++  GLIKA      I  +    G+     +  
Sbjct: 178 GYIVGSFQLGCTPEIYIRGVMKFLHTRDVVLGLIKATVFGFIISFMGCYNGYYCSGGARG 237

Query: 342 LGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +G   T  VV S  ++I ++ +  +FY
Sbjct: 238 VGIATTYVVVISSMLIIFLNYIVTVFY 264


>gi|169794572|ref|YP_001712365.1| toluene tolerance efflux ABC transporter membrane protein
           [Acinetobacter baumannii AYE]
 gi|213158857|ref|YP_002320855.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB0057]
 gi|215482161|ref|YP_002324343.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii
           AB307-0294]
 gi|260557005|ref|ZP_05829222.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii ATCC
           19606]
 gi|294839769|ref|ZP_06784452.1| toluene tolerance protein Ttg2B [Acinetobacter sp. 6013113]
 gi|294860447|ref|ZP_06798216.1| toluene tolerance protein Ttg2B [Acinetobacter sp. 6013150]
 gi|301347321|ref|ZP_07228062.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB056]
 gi|301510049|ref|ZP_07235286.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB058]
 gi|301597237|ref|ZP_07242245.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB059]
 gi|169147499|emb|CAM85360.1| toluene tolerance efflux transporter (ABC superfamily, membrane)
           [Acinetobacter baumannii AYE]
 gi|213058017|gb|ACJ42919.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB0057]
 gi|213988817|gb|ACJ59116.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii
           AB307-0294]
 gi|260409611|gb|EEX02912.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii ATCC
           19606]
          Length = 259

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 80/264 (30%), Positives = 135/264 (51%), Gaps = 10/264 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G+ +++ I    + AH+L  +I         S+  KG     + QM+ VGV  +
Sbjct: 2   NTIAWLGRLVIERIRGIGAAAHMLLQIIF--------SFPTKGGFGRFVYQMHRVGVMSL 53

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     GAV+  Q    L  FGAE      +S+  LRE+  ++ A++ AGR+GSA+
Sbjct: 54  LIIAVSGLFIGAVLGLQMYSILVTFGAESMLGTAISLTLLRELASVVAALLFAGRAGSAL 113

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIGSMK +E++ ++  +G+D ++ ++SPR+WA I+SLP+LT++     IIG  +V   
Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIIGGKMVGVD 173

Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTG-LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
           +       F+S   +T     +IF G +IK+   A     VA+ +G+A       +   +
Sbjct: 174 FLGADEGSFWSGMQNTVRFGHDIFNGTIIKSIVFALICTWVAVYQGYACDPTPEGIATAM 233

Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370
           T  VV S   V+  D +     F 
Sbjct: 234 TRTVVYSSLCVLGFDFVLTAVMFG 257


>gi|261378129|ref|ZP_05982702.1| toluene tolerance ABC efflux transporter, permease [Neisseria
           cinerea ATCC 14685]
 gi|269145589|gb|EEZ72007.1| toluene tolerance ABC efflux transporter, permease [Neisseria
           cinerea ATCC 14685]
          Length = 258

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 73/262 (27%), Positives = 132/262 (50%), Gaps = 8/262 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G K + FI    S    L  +++ +G                +RQ+Y+ GV  V
Sbjct: 2   NFIRSVGAKTLGFIQSLGSITLFLLNILAKSGTAFVRP-------CLSVRQVYFAGVLSV 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            +V +     G V+  QG  QLS+F +      +++   LRE+G +L A++ A  +G A+
Sbjct: 55  LIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAM 114

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            +EIG MK  E+++A+  M ++ V  +++PR WA + S+PLL  + N + I GA +V   
Sbjct: 115 TSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVS 174

Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +   +F+S+  +  T+  ++  GLIK+     A+ ++A+ +GF     S  + +  T
Sbjct: 175 WLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRAST 234

Query: 348 TCVVQSISIVIIIDSLFAIFYF 369
             VV S   ++ ID +   + F
Sbjct: 235 RTVVSSALTILAIDFVLTAWMF 256


>gi|37521379|ref|NP_924756.1| hypothetical protein glr1810 [Gloeobacter violaceus PCC 7421]
 gi|35212376|dbj|BAC89751.1| glr1810 [Gloeobacter violaceus PCC 7421]
          Length = 255

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 62/231 (26%), Positives = 114/231 (49%)

Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198
            G+      + +    + + Q+  VG   V V ++ +   G V   Q A +   FGA   
Sbjct: 14  AGQVLIHLLRGRIHWRNTVDQLSVVGTESVLVAVITAITIGMVFTIQVAREFISFGASSA 73

Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258
              +++I   RE+  +LTAV+IAGR GSA  AE+G+M++ E+IDA+  +  D +  L++P
Sbjct: 74  IGGVLAIALTRELAPVLTAVIIAGRVGSAFAAEVGTMRVTEQIDALEVLRTDPIDYLVTP 133

Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318
           R+ A  + LP+LTI+A+ + + G   +  + Y I   ++     +     ++ +GLIKA 
Sbjct: 134 RVIACAVMLPVLTIVADVTGLAGGLFITTQLYGISATLYLDSARNLLESWDMISGLIKAG 193

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
                I ++    G      +  +G   T  VV ++  + I++ + +   F
Sbjct: 194 IFGVLIALIGTNWGLTTTGGARGVGNSTTQSVVTALLTIFIVNFILSALMF 244


>gi|238023142|ref|ZP_04603568.1| hypothetical protein GCWU000324_03068 [Kingella oralis ATCC 51147]
 gi|237865525|gb|EEP66665.1| hypothetical protein GCWU000324_03068 [Kingella oralis ATCC 51147]
          Length = 257

 Score =  214 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 72/262 (27%), Positives = 130/262 (49%), Gaps = 8/262 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N     G K + FI    + A  L  ++    +    +          IRQMY+ GV  V
Sbjct: 2   NFIQSTGAKTLAFIQTLGANALFLLKILLLLPQTLLRA-------RLTIRQMYFSGVLSV 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G VI  QG  QL++F +      +++   LRE+G +L A++ A  +G A+
Sbjct: 55  LIIAVSGLFVGMVIGLQGYTQLAKFKSADVLGFMVAASLLRELGPVLAAILFASSAGGAM 114

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            +EIG MK  E+++A+  M ++ V  +++PR WA ++S+PLL  + N + I G  +V  +
Sbjct: 115 TSEIGLMKTTEQLEAMDVMAVNPVARVVAPRFWAGVVSMPLLACIFNVAGIYGGYLVGVQ 174

Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +   VF+S   +    + ++F GL K+     A+ ++A+ +GF     +  + +  T
Sbjct: 175 WLGLDTGVFWSNMQNNIDWSYDVFNGLTKSLIFGSAVALIAVYQGFHCTPTAEGILRAST 234

Query: 348 TCVVQSISIVIIIDSLFAIFYF 369
             VV S   V+ +D +   F F
Sbjct: 235 RTVVSSALTVLALDFILTAFMF 256


>gi|238019665|ref|ZP_04600091.1| hypothetical protein VEIDISOL_01539 [Veillonella dispar ATCC 17748]
 gi|237863706|gb|EEP64996.1| hypothetical protein VEIDISOL_01539 [Veillonella dispar ATCC 17748]
          Length = 242

 Score =  214 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 64/217 (29%), Positives = 114/217 (52%)

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           L  + +QM ++GV  +P++ L     GAV+  Q    L  +GA+     LM++   RE+G
Sbjct: 26  LWHVFQQMAHLGVDSLPIISLTLLFAGAVMTLQITDVLITYGAQSTVGGLMAVAMGRELG 85

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            +L  V++AGR G+AI AEIG+MK+ E+IDA+R M +D +  L+ PR+ A +I +P+L  
Sbjct: 86  PILVGVVLAGRVGAAITAEIGTMKVTEQIDALRVMAVDPIGYLVVPRVVACMIMVPILAF 145

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
                 I G   V      +  + +       +T+++   GL+K+      I +V   +G
Sbjct: 146 YGVVIGIAGGYFVATAIKGLAPSTYLDSIQMFSTISDFTLGLVKSSVFGAVIALVGSYKG 205

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               + + ++G   T+ VV SI +V +++   +   +
Sbjct: 206 METKMGAEAVGFSTTSSVVTSIILVFVLNYFLSTLLY 242


>gi|254423355|ref|ZP_05037073.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
 gi|196190844|gb|EDX85808.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
          Length = 264

 Score =  214 bits (546), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 69/239 (28%), Positives = 116/239 (48%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           L   I   G+             + I QM  VG   + + ++ S   G V   Q   +  
Sbjct: 17  LLSAILLGGQVIIHVISKPIHRRNTIEQMSAVGPESLLIALVTSVFVGMVFTIQVTREFI 76

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            FGA      +++I   RE+  +LTAV++AGR GSA  AEIG+M++ E+IDA++ +  D 
Sbjct: 77  TFGATTAIGGVLAITLSRELAPVLTAVVLAGRVGSAFAAEIGTMRVTEQIDALQMLRSDP 136

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A  + +P+L +LA  + ++G  +V    Y IPFAVF +   +  T+ ++ 
Sbjct: 137 VDYLVIPRVIACALMVPMLNVLAIITGLLGGLVVATTLYAIPFAVFLNSARNFLTIWDLA 196

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             LIK+      I ++    G      +  +G+  TT VV S+  + + +   +   F 
Sbjct: 197 ASLIKSLIFGVLIAVIGSSWGLTTTGGAKGVGQSTTTAVVTSLLAIFVSNFFLSWMMFQ 255


>gi|227825164|ref|ZP_03989996.1| membrane protein [Acidaminococcus sp. D21]
 gi|226905663|gb|EEH91581.1| membrane protein [Acidaminococcus sp. D21]
          Length = 260

 Score =  214 bits (546), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 71/266 (26%), Positives = 124/266 (46%), Gaps = 9/266 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
            K +  ++G + V     +    ++     +   +              ++RQM  +G  
Sbjct: 3   LKTICAYLGHRAVYAFRATGRIMNLFFATCAALSKATPR---------EVLRQMAKLGAD 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +P+V + S  TG V++ Q A +  +FGA      +++I   RE+  +L  V++AGR G+
Sbjct: 54  SLPIVSMTSMCTGMVLSVQTAKEFVRFGAADSVGGIVAIAMARELAPILAGVVVAGRIGA 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           AI AEIG+MK+ E+IDA+R M     + L++PR  A+++ +P+L I AN    IG   V 
Sbjct: 114 AIAAEIGTMKVTEQIDALRVMATSPTQYLVAPRFLAIVLMMPILVIYANLVGDIGGGFVA 173

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
             Y  I   +F           ++  GLIK       I ++   +G      +  +GK  
Sbjct: 174 MNYAGIGSHMFIESIRGFVESWDLVGGLIKGSVFGAIIAVIGCHKGLNAQQGAEGVGKAT 233

Query: 347 TTCVVQSISIVIIIDSLFAIFYFAIG 372
           T  VV SI ++ I +   ++  +  G
Sbjct: 234 TASVVLSIILIFIFNYFLSVMLYVHG 259


>gi|262370600|ref|ZP_06063925.1| toluene tolerance protein Ttg2B [Acinetobacter johnsonii SH046]
 gi|262314400|gb|EEY95442.1| toluene tolerance protein Ttg2B [Acinetobacter johnsonii SH046]
          Length = 259

 Score =  214 bits (546), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 67/264 (25%), Positives = 129/264 (48%), Gaps = 10/264 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G+++++ +      + +L  ++ +              +   + QMY VGV  +
Sbjct: 2   NAIALLGRRVIERVRGIGVASLMLLQILFSMPTALG--------VRLFVYQMYRVGVLSL 53

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++++     GAV+  Q    L  FG+E      +++  LRE+  ++ A++ AGR+GSA+
Sbjct: 54  LIIVVSGLFIGAVLGLQMYSILVTFGSEAMLGTAVALTLLRELAPVVAALLFAGRAGSAL 113

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG MK  E++ ++  +G+D ++ +ISPR+WA I SLP+L+++     I+G  +V   
Sbjct: 114 TAEIGLMKATEQLSSMEMIGVDPLKRVISPRLWAGIFSLPMLSVIFAAVGIMGGKMVGVD 173

Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTG-LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
           +       ++S   S+     ++  G +IK+   A     +A+ +G+A    S  +    
Sbjct: 174 FLGADEGSYWSGIQSSVEFYKDVLNGTIIKSFVFALICTWIAVYQGYACEPTSEGIATST 233

Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370
           T  VV S   V+  D +     F 
Sbjct: 234 TRTVVYSSLCVLGFDFVLTAVMFG 257


>gi|148284291|ref|YP_001248381.1| ABC transporter permease protein [Orientia tsutsugamushi str.
           Boryong]
 gi|146739730|emb|CAM79561.1| ABC transporter permease protein [Orientia tsutsugamushi str.
           Boryong]
          Length = 301

 Score =  214 bits (546), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 61/257 (23%), Positives = 120/257 (46%), Gaps = 7/257 (2%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           IG++ +K   +     + L   I          +    +    I+ +  +G   +P+V  
Sbjct: 49  IGQRTIKIFYNIILFQNFLFASIKGI-------FTLPYYFNITIQAIINIGFYSLPIVAA 101

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
            S  +GAV+A Q    + +  A      ++     RE+G ++  +++AGR G++IVAEIG
Sbjct: 102 TSLCSGAVLALQTYEGVVRSSAIHAIPMIIVTSITRELGPVIVGLIVAGRIGASIVAEIG 161

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           +M++ E+IDA+ T+  D ++ L++PR+ A  +SLP L + ++   + G  +V     +  
Sbjct: 162 TMRVTEQIDALFTLATDPIKYLVTPRLVATTLSLPFLVLTSDVIGVFGGYLVSVYRLNFN 221

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              +        T  ++ +GLIKA      IGI +   G+     +  +G   T  VV S
Sbjct: 222 SYEYIQSTIHHLTSTDVISGLIKAIVFGMIIGITSCFHGYYSDKGAKGVGIATTYGVVHS 281

Query: 354 ISIVIIIDSLFAIFYFA 370
             ++++ + +      +
Sbjct: 282 SILILLSNYIMTELLLS 298


>gi|325105498|ref|YP_004275152.1| protein of unknown function DUF140 [Pedobacter saltans DSM 12145]
 gi|324974346|gb|ADY53330.1| protein of unknown function DUF140 [Pedobacter saltans DSM 12145]
          Length = 260

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 65/240 (27%), Positives = 115/240 (47%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
            F     +  + L LV      F    +        +++Q Y +G   + ++ L  F+TG
Sbjct: 7   GFRKKLNNIFYELYLVHKFIVRFFKELFSAPVEWKEIMKQCYLLGFKSLSLITLTGFITG 66

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V  +Q    L++FGA  +   L++I  +R +  LLTA++ AG+ GS I AE+GSMK+ E
Sbjct: 67  IVFTKQSRPSLAEFGATSWLPSLVAIAIIRSLAPLLTALITAGKVGSNIGAELGSMKVTE 126

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +IDA+   G +  + L+  R  A  I++P+LT       ++GA + +  + +  +  F  
Sbjct: 127 QIDAMEVSGTNPFKFLVVTRTLATTITIPILTFYTGLVGLLGAFLNVTTFENTSYQAFMQ 186

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
               + +  +IF   IKA      IGIV   +G+     +  +G+     VV  + +V +
Sbjct: 187 SAFESISFLDIFASTIKAIVFGFTIGIVGCYQGYNSSKGTEGVGRAANASVVIGMFLVFL 246


>gi|242277489|ref|YP_002989618.1| hypothetical protein Desal_0007 [Desulfovibrio salexigens DSM 2638]
 gi|242120383|gb|ACS78079.1| protein of unknown function DUF140 [Desulfovibrio salexigens DSM
           2638]
          Length = 249

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 82/237 (34%), Positives = 130/237 (54%), Gaps = 1/237 (0%)

Query: 134 LVISNTGEFCASSYKFKGFLL-SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           +V    G    +    K F    LIR +  VG   +P+V +IS  TG ++A Q A QL +
Sbjct: 10  MVSRLLGCLRLTPGNKKSFYRKRLIRDLASVGADSIPIVSVISACTGIILALQSAQQLEK 69

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
            GA  +  +L+ +  +RE+G LLTA+++ GRSG+A  AEI +M+I+EEIDA+  MG++ V
Sbjct: 70  VGAISYVANLVGVTIIRELGPLLTAIIVTGRSGAAFTAEIATMQISEEIDALEVMGIEPV 129

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
           R L+ P++ A++I +P LT+ A+F  I            I    +F+       L ++  
Sbjct: 130 RFLVVPKMIAMLIMVPCLTVWADFVGIFSGGAFSAIALGINEVTYFNNSVEFLKLHDVLA 189

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           GL+KA   A AI ++   +GF     +  +G+K T  VV SI ++I++D  F    F
Sbjct: 190 GLVKAGGFAVAITLIGCWQGFLAREGAADVGRKTTNSVVISIFMIILLDLFFTALNF 246


>gi|261401680|ref|ZP_05987805.1| toluene tolerance ABC efflux transporter, permease [Neisseria
           lactamica ATCC 23970]
 gi|269208206|gb|EEZ74661.1| toluene tolerance ABC efflux transporter, permease [Neisseria
           lactamica ATCC 23970]
          Length = 258

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 71/262 (27%), Positives = 131/262 (50%), Gaps = 8/262 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G K +  I    S    L  +++ +G                +RQ+Y+ GV  V
Sbjct: 2   NFIRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRP-------RLSVRQVYFAGVLSV 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            +V +     G V+  QG  QLS+F +      +++   LRE+G +L A++ A  +G A+
Sbjct: 55  LIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAM 114

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            +EIG MK  E+++A+  M ++ V  +++PR WA + S+PLL  + N + I GA +V   
Sbjct: 115 TSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVT 174

Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +   +F+S+  +  T+  ++  GLIK+     A+ ++A+ +GF     S  + +  T
Sbjct: 175 WLGLDSGIFWSQMQNNITIHYDVINGLIKSVAFGVAVTLIAVHQGFHCVPTSEGILRAST 234

Query: 348 TCVVQSISIVIIIDSLFAIFYF 369
             VV S   ++ +D +   + F
Sbjct: 235 RTVVSSALTILAVDFILTAWMF 256


>gi|329913017|ref|ZP_08275865.1| putative transport protein (ABC superfamily, membrane)
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327545454|gb|EGF30661.1| putative transport protein (ABC superfamily, membrane)
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 258

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 59/265 (22%), Positives = 128/265 (48%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             +    +G ++  F+      A     ++  +                +  Q+++VG  
Sbjct: 1   MLDWIAALGSRVTGFLYQIGYAARAFLAILRASAGLWRRP-------RLITDQIHFVGNY 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+
Sbjct: 54  SLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGT 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           ++ AEIG MK  E++ A+  M +D ++ +++PR WA +I++P+L  + +   I+G  +V 
Sbjct: 114 SLTAEIGLMKAGEQLSAMEMMAVDPIQRVLAPRFWAGVIAMPVLAAIFSAVGIVGGYVVG 173

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
            +   I    F+S+      +  +I  G++K+     A+  +A+ +G+        + + 
Sbjct: 174 VQMIGIDEGAFWSQMQGGVDVWQDIANGVLKSFVFGIAVTFIALFQGYEAQPTPEGVARA 233

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV     V+ +D L     F 
Sbjct: 234 TTRTVVIGSLTVLWLDFLMTALMFN 258


>gi|254670842|emb|CBA07277.1| putative membrane protein [Neisseria meningitidis alpha153]
 gi|308390063|gb|ADO32383.1| putative ABC transport inner membrane subunit [Neisseria
           meningitidis alpha710]
 gi|309378880|emb|CBX22467.1| unnamed protein product [Neisseria lactamica Y92-1009]
 gi|319409726|emb|CBY90032.1| conserved hypothetical membrane protein [Neisseria meningitidis WUE
           2594]
 gi|325127428|gb|EGC50359.1| putative membrane protein [Neisseria meningitidis N1568]
 gi|325137489|gb|EGC60074.1| putative membrane protein [Neisseria meningitidis ES14902]
          Length = 258

 Score =  213 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 71/262 (27%), Positives = 131/262 (50%), Gaps = 8/262 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G K +  I    S    L  +++ +G                +RQ+Y+ GV  V
Sbjct: 2   NFIRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRP-------RLSVRQVYFAGVLSV 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            +V +     G V+  QG  QLS+F +      +++   LRE+G +L A++ A  +G A+
Sbjct: 55  LIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAM 114

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            +EIG MK  E+++A+  M ++ V  +++PR WA + S+PLL  + N + I GA +V   
Sbjct: 115 TSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVS 174

Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +   +F+S+  +  T+  ++  GLIK+     A+ ++A+ +GF     S  + +  T
Sbjct: 175 WLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRAST 234

Query: 348 TCVVQSISIVIIIDSLFAIFYF 369
             VV S   ++ +D +   + F
Sbjct: 235 RTVVSSALTILAVDFILTAWMF 256


>gi|325266930|ref|ZP_08133601.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Kingella denitrificans
           ATCC 33394]
 gi|324981671|gb|EGC17312.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Kingella denitrificans
           ATCC 33394]
          Length = 257

 Score =  213 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 71/262 (27%), Positives = 130/262 (49%), Gaps = 8/262 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N   +IG K + FI         LG  +           +    +   +RQMY+ GV  V
Sbjct: 2   NPIQNIGAKTIAFIQ-------ALGATVLFLLNILMLLPQSLFRMRLTVRQMYFSGVMSV 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G VI  QG  QL++F +      +++   LRE+G +L A++ A  +G A+
Sbjct: 55  LIIAVSGLFVGMVIGLQGYTQLAKFKSADVLGFMVAASLLRELGPVLAAILFASSAGGAM 114

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            +EIG MK  E+++A+  M ++ V  +++PR WA ++S+PLL  + N + I G  +V  +
Sbjct: 115 TSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVLSMPLLACIFNVAGIYGGYLVGVQ 174

Query: 289 YYDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +   VF+S   +    + ++  GL+K+     A+ ++A+ +GF     +  + +  T
Sbjct: 175 WLGLDSGVFWSNMQNNIDVVYDVGNGLLKSLIFGTAVSLIAVYQGFHCTPTAEGILRAST 234

Query: 348 TCVVQSISIVIIIDSLFAIFYF 369
             VV S   V+ +D +   F F
Sbjct: 235 RTVVSSALTVLALDFILTAFMF 256


>gi|294669772|ref|ZP_06734838.1| hypothetical protein NEIELOOT_01672 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308338|gb|EFE49581.1| hypothetical protein NEIELOOT_01672 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 258

 Score =  213 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 74/262 (28%), Positives = 136/262 (51%), Gaps = 8/262 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           NL   +G K + FI    S    L  +++++G                +RQ+Y+ GV  V
Sbjct: 2   NLIRTVGAKTLGFIQALGSVCLFLLQILAHSGTSLLR-------FRLSVRQVYFAGVLSV 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG  QL++F +      +++   LRE+G +L A++ A  +G A+
Sbjct: 55  LIIAVSGLFVGMVLGLQGYTQLAKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAM 114

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            +EIG MK  E+++A+  M ++ V  +++PR WA + S+PLL  + N + I GA +V  +
Sbjct: 115 TSEIGLMKATEQLEAMNVMAINPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVQ 174

Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +   +F+S+  +  +   ++  GLIK+ F   A+ ++A+ +GF     S  + +  T
Sbjct: 175 WLGLDGGIFWSQMQNNISFGYDVLNGLIKSAFFGVAVTLIAVHQGFHALPTSEGILRAST 234

Query: 348 TCVVQSISIVIIIDSLFAIFYF 369
             VV S  +V+ ID +   F F
Sbjct: 235 RTVVSSALVVLAIDFILTAFMF 256


>gi|303246386|ref|ZP_07332665.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans
           JJ]
 gi|302492096|gb|EFL51971.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans
           JJ]
          Length = 268

 Score =  213 bits (544), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 77/264 (29%), Positives = 134/264 (50%), Gaps = 12/264 (4%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170
              +G+  +  +++       L   +        S  K       +++Q+Y++GV  + V
Sbjct: 12  VTWLGRTALSILSELGGFFIFLCQGLWRILVPFPSVPK-------IVQQVYFIGVKSIFV 64

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           ++LI   TG V+  QG + L +FG+E      +++  +RE+G +LTA+M+ GR+GS+I A
Sbjct: 65  IVLIGLFTGMVLGLQGYYTLVKFGSEGLLGAAVALSIIRELGPVLTAIMLTGRAGSSIAA 124

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           EIG M+I+E+IDA+ TMG++ +R LI+PR+ A +I  PLLT + +   I G  +      
Sbjct: 125 EIGIMRISEQIDALTTMGINPMRFLIAPRLAASLICFPLLTAIFDVVGIGGGYLTGVVLL 184

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKK 345
            I   V+F R  +   LA++  G  K+   A  +  +   EG+       G  +  +   
Sbjct: 185 GINPGVYFDRIDAAVELADVTGGFEKSIVFALLVAAICCYEGYFTHTRREGFGAKGVSLA 244

Query: 346 VTTCVVQSISIVIIIDSLFAIFYF 369
            T+ VV S   V++ D +   F  
Sbjct: 245 TTSAVVVSCVTVLVADYVLTSFLL 268


>gi|167645542|ref|YP_001683205.1| hypothetical protein Caul_1577 [Caulobacter sp. K31]
 gi|167347972|gb|ABZ70707.1| protein of unknown function DUF140 [Caulobacter sp. K31]
          Length = 268

 Score =  213 bits (544), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 67/253 (26%), Positives = 119/253 (47%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +      +     ++G V         S +    F    +RQ+  +G   +PVV L +
Sbjct: 13  RPLRTIGRSTLGALRMVGGVGVFALRGVVSVFTPPWFASQFLRQLVAIGFFSLPVVGLTA 72

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
             TGA +         +F AE     ++++   RE+G +L A+M+AGR  +AI AEIG+M
Sbjct: 73  IFTGAALGLNIYTGGGRFNAEQVMPQIVALGITRELGPVLAALMLAGRVSAAIAAEIGAM 132

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           +  E+IDA+RT+  D  R L++PR+ A  + LPLLT++A+   + G  +V  +  D    
Sbjct: 133 RATEQIDAMRTLSTDPFRYLVAPRLLAATLVLPLLTLVADVIGVAGGWLVAVRILDFNST 192

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           V+     +     ++ +GLIKA      + ++    G+     +  +G+  T  VV S  
Sbjct: 193 VYIRNTANFIQGWDVGSGLIKAAVFGFIVALMGCYHGYNAKGGARGVGRATTHAVVSSAI 252

Query: 356 IVIIIDSLFAIFY 368
           ++   D      +
Sbjct: 253 LIFASDYFLTTLF 265


>gi|15677795|ref|NP_274959.1| hypothetical protein NMB1965 [Neisseria meningitidis MC58]
 gi|218767464|ref|YP_002341976.1| putative ABC transport inner membrane subunit [Neisseria
           meningitidis Z2491]
 gi|254804222|ref|YP_003082443.1| putative ABC transport system permease protein [Neisseria
           meningitidis alpha14]
 gi|296313905|ref|ZP_06863846.1| toluene tolerance ABC efflux transporter, permease [Neisseria
           polysaccharea ATCC 43768]
 gi|313669181|ref|YP_004049465.1| ABC transport inner membrane subunit [Neisseria lactamica ST-640]
 gi|7227225|gb|AAF42294.1| conserved hypothetical protein [Neisseria meningitidis MC58]
 gi|121051472|emb|CAM07765.1| putative ABC transport inner membrane subunit [Neisseria
           meningitidis Z2491]
 gi|254667764|emb|CBA03695.1| putative ABC transport system permease protein [Neisseria
           meningitidis alpha14]
 gi|254672981|emb|CBA07458.1| putative ABC transport system permease protein [Neisseria
           meningitidis alpha275]
 gi|261393293|emb|CAX50921.1| conserved hypothetical membrane protein [Neisseria meningitidis
           8013]
 gi|296839439|gb|EFH23377.1| toluene tolerance ABC efflux transporter, permease [Neisseria
           polysaccharea ATCC 43768]
 gi|313006643|emb|CBN88109.1| putative ABC transport inner membrane subunit [Neisseria lactamica
           020-06]
 gi|316985593|gb|EFV64540.1| toluene tolerance protein Ttg2B [Neisseria meningitidis H44/76]
 gi|325129426|gb|EGC52257.1| putative membrane protein [Neisseria meningitidis OX99.30304]
 gi|325135556|gb|EGC58174.1| putative membrane protein [Neisseria meningitidis M0579]
 gi|325139615|gb|EGC62155.1| putative membrane protein [Neisseria meningitidis CU385]
 gi|325201013|gb|ADY96468.1| putative membrane protein [Neisseria meningitidis H44/76]
 gi|325201398|gb|ADY96852.1| putative membrane protein [Neisseria meningitidis M01-240149]
 gi|325204915|gb|ADZ00369.1| putative membrane protein [Neisseria meningitidis M01-240355]
 gi|325207379|gb|ADZ02831.1| putative membrane protein [Neisseria meningitidis NZ-05/33]
          Length = 258

 Score =  213 bits (544), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 71/262 (27%), Positives = 131/262 (50%), Gaps = 8/262 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G K +  I    S    L  +++ +G                +RQ+Y+ GV  V
Sbjct: 2   NFIRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRP-------RLSVRQVYFAGVLSV 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            +V +     G V+  QG  QLS+F +      +++   LRE+G +L A++ A  +G A+
Sbjct: 55  LIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAM 114

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            +EIG MK  E+++A+  M ++ V  +++PR WA + S+PLL  + N + I GA +V   
Sbjct: 115 TSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVT 174

Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +   +F+S+  +  T+  ++  GLIK+     A+ ++A+ +GF     S  + +  T
Sbjct: 175 WLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRAST 234

Query: 348 TCVVQSISIVIIIDSLFAIFYF 369
             VV S   ++ +D +   + F
Sbjct: 235 RTVVSSALTILAVDFILTAWMF 256


>gi|213018814|ref|ZP_03334622.1| putative membrane protein [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|212995765|gb|EEB56405.1| putative membrane protein [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 244

 Score =  213 bits (544), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 59/242 (24%), Positives = 114/242 (47%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            +    +G       +     +    +  ++ RQ+  +G   +P+V L     GAVI  Q
Sbjct: 1   MNFLLRIGNAFVFFIQSLYHCFIPPYYFSNVARQIIEIGFFSLPIVGLTGVFIGAVIVLQ 60

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            +        E     L++I  ++E+G +L ++++ G+ GS+I AEIG+M+I E+IDA+ 
Sbjct: 61  SSLSGILINQEQVVPKLVTITIIKELGPVLISLIMVGKVGSSIAAEIGTMRITEQIDALT 120

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           T+ ++  + LI PRI A +I  P+LT+ A+   I G  +     ++    ++        
Sbjct: 121 TLDINPFKYLIVPRILASVIVFPILTVCADLIGIFGGYVTAVFEFNHNLNIYIKYTAQFF 180

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            + +   GL+KA      I + +   G+     +  +G   T+ VV S  ++I+ + L  
Sbjct: 181 NMYDFIVGLMKATAFGAIISVSSCYYGYHCREGARGVGIATTSTVVISSILIILANYLIT 240

Query: 366 IF 367
           + 
Sbjct: 241 LI 242


>gi|110639360|ref|YP_679569.1| ABC transporter permease [Cytophaga hutchinsonii ATCC 33406]
 gi|110282041|gb|ABG60227.1| ABC transporter, permease [Cytophaga hutchinsonii ATCC 33406]
          Length = 263

 Score =  213 bits (544), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 67/225 (29%), Positives = 113/225 (50%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
             +    F    +K    L  +I Q Y VG+  +P++ L  FVTG V  +Q    L  FG
Sbjct: 24  AFAFVALFFKQVFKPPFNLRQVIDQCYEVGIKSLPLITLTGFVTGLVFTKQSRPSLEVFG 83

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
           A  +   L+SI  +R +G L+TA++ AG+ GS+I AE+GSMK+ E+IDA+    ++  + 
Sbjct: 84  ATSWLPSLISIALVRALGPLVTALICAGKVGSSIGAELGSMKVTEQIDAMEVSAINPFKY 143

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L+  R+ A    + +L+   +   ++GA + +       FA FF    S     +IF+ +
Sbjct: 144 LVVTRVLATTFMVSILSFYCSLVGLLGAFVNVHANDTTSFANFFQSGFSDINFIDIFSSV 203

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
            K+      IGIV   +GF     +  +GK     VV ++ ++ +
Sbjct: 204 TKSLVFGFTIGIVGCYKGFNATQGTRGVGKAANQAVVTAMFLIFV 248


>gi|121635620|ref|YP_975865.1| putative ABC transport inner membrane subunit [Neisseria
           meningitidis FAM18]
 gi|120867326|emb|CAM11097.1| putative ABC transport inner membrane subunit [Neisseria
           meningitidis FAM18]
 gi|325131371|gb|EGC54080.1| putative membrane protein [Neisseria meningitidis M6190]
 gi|325133423|gb|EGC56087.1| putative membrane protein [Neisseria meningitidis M13399]
 gi|325141491|gb|EGC63964.1| putative membrane protein [Neisseria meningitidis 961-5945]
 gi|325143674|gb|EGC65993.1| putative membrane protein [Neisseria meningitidis M01-240013]
 gi|325199054|gb|ADY94510.1| putative membrane protein [Neisseria meningitidis G2136]
 gi|325206870|gb|ADZ02323.1| putative membrane protein [Neisseria meningitidis M04-240196]
          Length = 258

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 71/262 (27%), Positives = 131/262 (50%), Gaps = 8/262 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G K +  I    S    L  +++ +G                +RQ+Y+ GV  V
Sbjct: 2   NFIRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRP-------RLSVRQVYFAGVLSV 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            +V +     G V+  QG  QLS+F +      +++   LRE+G +L A++ A  +G A+
Sbjct: 55  LIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAM 114

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            +EIG MK  E+++A+  M ++ V  +++PR WA + S+PLL  + N + I GA +V   
Sbjct: 115 TSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVS 174

Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +   +F+S+  +  T+  ++  GLIK+     A+ ++A+ +GF     S  + +  T
Sbjct: 175 WLSLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRAST 234

Query: 348 TCVVQSISIVIIIDSLFAIFYF 369
             VV S   ++ +D +   + F
Sbjct: 235 RTVVSSALTILAVDFILTAWMF 256


>gi|224069577|ref|XP_002303003.1| ABC transporter family protein [Populus trichocarpa]
 gi|222844729|gb|EEE82276.1| ABC transporter family protein [Populus trichocarpa]
          Length = 258

 Score =  213 bits (543), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 58/236 (24%), Positives = 112/236 (47%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
           V+   G+    S   K    + ++Q+  VG   V V +L S   G     Q   + ++ G
Sbjct: 16  VLVLAGQVIIRSLMGKIHWRNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLG 75

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
                  ++++   RE+  ++T++++AGR GSA  AE+G+M+++E+ID +R +G D V  
Sbjct: 76  LNRSIGGVLALAFSRELSPVVTSIVVAGRIGSAFAAELGTMQVSEQIDTLRVLGADPVDY 135

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L+ PR+ A  ++LP LT++     +  + ++    Y I   +            +I + +
Sbjct: 136 LVIPRVIASCLALPFLTLMCFTVGMASSGLLADSVYGISLNIILDSAQRALNSWDIISAM 195

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           IK+      I IV+   G      +  +G+  T+ VV S+  + + D   +  +F 
Sbjct: 196 IKSGVFGAIISIVSCAWGVTTMGGAKGVGESTTSAVVISLVGIFMADFALSYCFFQ 251


>gi|161869245|ref|YP_001598412.1| putative ABC transport system permease protein [Neisseria
           meningitidis 053442]
 gi|304388521|ref|ZP_07370624.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Neisseria meningitidis ATCC 13091]
 gi|161594798|gb|ABX72458.1| putative ABC transport system permease protein [Neisseria
           meningitidis 053442]
 gi|304337518|gb|EFM03684.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Neisseria meningitidis ATCC 13091]
          Length = 258

 Score =  213 bits (543), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 131/262 (50%), Gaps = 8/262 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G + +  I    S    L  +++ +G                +RQ+Y+ GV  V
Sbjct: 2   NFIRSVGARTLGLIQSLGSITLFLLNILAKSGTAFVRP-------RLSVRQVYFAGVLSV 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            +V +     G V+  QG  QLS+F +      +++   LRE+G +L A++ A  +G A+
Sbjct: 55  LIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAM 114

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            +EIG MK  E+++A+  M ++ V  +++PR WA + S+PLL  + N + I GA +V   
Sbjct: 115 TSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVT 174

Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +   +F+S+  +  T+  ++  GLIK+     A+ ++A+ +GF     S  + +  T
Sbjct: 175 WLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRAST 234

Query: 348 TCVVQSISIVIIIDSLFAIFYF 369
             VV S   ++ +D +   + F
Sbjct: 235 RTVVSSALTILAVDFILTAWMF 256


>gi|262377332|ref|ZP_06070556.1| toluene tolerance protein Ttg2B [Acinetobacter lwoffii SH145]
 gi|262307785|gb|EEY88924.1| toluene tolerance protein Ttg2B [Acinetobacter lwoffii SH145]
          Length = 259

 Score =  213 bits (543), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 69/264 (26%), Positives = 130/264 (49%), Gaps = 10/264 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G+++++ +        +L  ++ +   +          +   I QMY VGV  +
Sbjct: 2   NAIAALGRRVIERVQGIGVATLMLLQILFSMPTWLG--------VKLFIYQMYRVGVLSL 53

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++++     GAV+  Q    LS FG+E      +++  LRE+  ++ A++ AGR+GSA+
Sbjct: 54  LIIVVSGLFIGAVLGLQMFSILSTFGSESMLGTAVALTLLRELAPVVAALLFAGRAGSAL 113

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG MK  E++ ++  +G+D ++ +ISPR+WA I SLP+L+++     I+G  +V   
Sbjct: 114 TAEIGLMKATEQLSSMEMIGVDPLKRVISPRLWAGIFSLPMLSVIFAAVGIMGGKMVGVD 173

Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTG-LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
           +       ++S   S+     ++  G +IK+   A     +A+ +G+A    S  +    
Sbjct: 174 FLGADEGAYWSGMESSVQFYKDVLNGTIIKSFVFALICTWIAVYQGYACVPTSEGIATST 233

Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370
           T  VV S   V+  D +     F 
Sbjct: 234 TRTVVYSSLCVLGFDFVLTAVMFG 257


>gi|225619573|ref|YP_002720830.1| ABC transporter permease [Brachyspira hyodysenteriae WA1]
 gi|225214392|gb|ACN83126.1| Ttg2B, ABC-type transport system, permease component [Brachyspira
           hyodysenteriae WA1]
          Length = 268

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 64/248 (25%), Positives = 119/248 (47%), Gaps = 2/248 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               LG   +   E    +++       L  Q+  +GV    V  +    TG V++ Q A
Sbjct: 21  FLATLGEFATLMIEVFRYTFRPTFSFKLLKEQIIRMGVDSFVVAAVTVLCTGMVMSLQIA 80

Query: 188 FQLSQF--GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
             L     G   F   ++    ++E+  +L A++ AGR GS++ AEIG+M+++E++DA++
Sbjct: 81  VVLDSVLKGISQFVGSMVGKAMVKELSPMLLALIFAGRVGSSVTAEIGTMQVSEQLDALK 140

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           T+  + +  +  PR WA +ISLP+LT+ A+   ++G ++V           +F R  +  
Sbjct: 141 TLYTNPIEYVAVPRFWAAVISLPMLTVSADVIGVLGGAVVTVFVLRSDPMHYFDRAIAVI 200

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           ++ +    LIK+      + +++   GF     +  +GK  TT VV S  I++I D +  
Sbjct: 201 SVGDFIGSLIKSTIFGAEVMLISCFYGFRTSGGAEGVGKATTTSVVYSFMIILITDYILV 260

Query: 366 IFYFAIGI 373
                 G+
Sbjct: 261 SILGMFGM 268


>gi|298369697|ref|ZP_06981014.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282254|gb|EFI23742.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314]
          Length = 258

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 69/262 (26%), Positives = 131/262 (50%), Gaps = 8/262 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G K + FI    S    L  +++ +                 IRQ+Y+ GV  V
Sbjct: 2   NFIRTVGAKTLDFIQSLGSITLFLLRILTKSATAFTRP-------RLSIRQVYFSGVMSV 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG  QL++F +      +++   LRE+G +L A++ A  +G A+
Sbjct: 55  LIIAVSGLFVGMVLGLQGYTQLAKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAM 114

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            +EIG MK  E+++A+  M +D V  +++PR WA + S+PLL  + N + I GA +V  +
Sbjct: 115 TSEIGLMKTTEQLEAMNVMAVDPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVQ 174

Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +   +F+++  +  +   ++  GLIK+     A+ ++A+ +GF     S  + +  T
Sbjct: 175 WLGLDGGIFWAQMQNNISFGYDVANGLIKSAAFGTAVTLIAVHQGFHCVPTSEGILRAST 234

Query: 348 TCVVQSISIVIIIDSLFAIFYF 369
             VV S   ++ +D +   + F
Sbjct: 235 RTVVSSALTILAVDFVLTAWMF 256


>gi|73666683|ref|YP_302699.1| hypothetical protein Ecaj_0050 [Ehrlichia canis str. Jake]
 gi|72393824|gb|AAZ68101.1| protein of unknown function DUF140 [Ehrlichia canis str. Jake]
          Length = 265

 Score =  213 bits (542), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 7/259 (2%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           L   +GK ++  I +           + N        +    +   + +Q   +    +P
Sbjct: 13  LLETVGKYVINLIFNIGHSFVFFVKFVCNC-------FMPPYYYGVIFKQFIEIFFFSLP 65

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +V + +  TGAV+  Q +  +    +  F   ++ +  +RE+G +L  ++IAGR G+AI 
Sbjct: 66  IVGITAIFTGAVLILQNSLIIHNNVSGDFVSGVVVVAIVRELGPVLIGLIIAGRVGAAIA 125

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG+M+I E+IDA+ T+  +  + LI PRI + +I++PLL + A+     G  IV    
Sbjct: 126 AEIGTMRITEQIDALFTLDTNPFKYLIVPRIISAMIAMPLLILCADLIGAYGGYIVGSYQ 185

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
                 ++         + ++  GLIKA      I  +    G+     +  +G   T  
Sbjct: 186 LGYTPEIYVRGIMKFLHVKDVILGLIKATVFGFIISFMGCYSGYYCSGGARGVGMATTYV 245

Query: 350 VVQSISIVIIIDSLFAIFY 368
           VV S   +I+++ +  +FY
Sbjct: 246 VVVSSMFIILLNYVITVFY 264


>gi|308814916|dbj|BAJ22980.1| L-glutamate ABC transporter [Neisseria meningitidis]
          Length = 258

 Score =  213 bits (542), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 71/262 (27%), Positives = 131/262 (50%), Gaps = 8/262 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G K +  I    S    L  +++ +G                +RQ+Y+ GV  V
Sbjct: 2   NFIRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRP-------RLSVRQVYFAGVLSV 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            +V +     G V+  QG  QLS+F +      +++   LRE+G +L A++ A  +G A+
Sbjct: 55  LIVAVSGMFVGIVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAM 114

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            +EIG MK  E+++A+  M ++ V  +++PR WA + S+PLL  + N + I GA +V   
Sbjct: 115 TSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVS 174

Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +   +F+S+  +  T+  ++  GLIK+     A+ ++A+ +GF     S  + +  T
Sbjct: 175 WLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRAST 234

Query: 348 TCVVQSISIVIIIDSLFAIFYF 369
             VV S   ++ +D +   + F
Sbjct: 235 RTVVSSALTILAVDFILTAWMF 256


>gi|311746375|ref|ZP_07720160.1| putative ABC transporter, permease protein [Algoriphagus sp. PR1]
 gi|126575261|gb|EAZ79593.1| putative ABC transporter, permease protein [Algoriphagus sp. PR1]
          Length = 263

 Score =  212 bits (541), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 68/246 (27%), Positives = 122/246 (49%), Gaps = 7/246 (2%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           I KK  KF +   S  +           F    +     L  +  Q Y +GV  +P++ L
Sbjct: 10  ITKKTDKFFSGLASAWNF-------VRRFFKEVFIPPYELKEVFHQCYRIGVESLPLISL 62

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
             F+ G V   Q    LS+FGA  +   L+SI  +R +G L+TA++ AG+ GS+I AEIG
Sbjct: 63  TGFIVGIVFTNQSRPSLSEFGATSWLPSLISIAVVRAMGPLVTALIAAGKMGSSIGAEIG 122

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           SMK+ E+IDA+     +  + L+  R+ A    +P+L +  +F A++G+ + +     + 
Sbjct: 123 SMKVTEQIDAMEVSATNPFKFLVVTRVLATTFMIPILVMYTDFVALMGSFLSVNANEMVS 182

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              FF +   + +  +I + ++K+      IGIV   +G+     +  +G+   + VV +
Sbjct: 183 MTTFFVQVFESISFLDITSSVLKSLLFGFTIGIVGCYKGYNSSKGTEGVGRAANSAVVMA 242

Query: 354 ISIVII 359
           + ++ I
Sbjct: 243 MFLIFI 248


>gi|329120837|ref|ZP_08249497.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Neisseria bacilliformis
           ATCC BAA-1200]
 gi|327459709|gb|EGF06050.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Neisseria bacilliformis
           ATCC BAA-1200]
          Length = 258

 Score =  212 bits (541), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 132/262 (50%), Gaps = 8/262 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           +    +G K + FI    S       +++++G            L   +RQ+Y+ GV  V
Sbjct: 2   DFIQTVGAKTLAFIRSIGSVCLFFAQILAHSGTSLLR-------LRLSVRQVYFAGVLSV 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG  QL++F +      +++   LRE+G +L A++ A  +G A+
Sbjct: 55  LIIAVSGLFVGMVLGLQGYTQLAKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAM 114

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            +EIG MK  E+++A+  M ++ V  +++PR WA + S+PLL  + N + I GA +V  +
Sbjct: 115 TSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVE 174

Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +   +F+S+  +      ++  GLIK+     A+ ++A+ +GF     S  + +  T
Sbjct: 175 WLGLDGGIFWSQMQNNIAFGYDVLNGLIKSACFGVAVTLIAVHQGFHCVPTSEGILRAST 234

Query: 348 TCVVQSISIVIIIDSLFAIFYF 369
             VV S   V+ +D +   F F
Sbjct: 235 RTVVSSALTVLAVDFILTAFMF 256


>gi|83593780|ref|YP_427532.1| hypothetical protein Rru_A2445 [Rhodospirillum rubrum ATCC 11170]
 gi|83576694|gb|ABC23245.1| Protein of unknown function DUF140 [Rhodospirillum rubrum ATCC
           11170]
          Length = 389

 Score =  212 bits (541), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 82/373 (21%), Positives = 162/373 (43%), Gaps = 4/373 (1%)

Query: 2   SENGITVFRFAGNWKSPEIS-EIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
            E   +V   +G+W + +     A ++   +       S   D+S +   D+        
Sbjct: 20  QEGADSVVVLSGDWLASQTGLRSAVEITRLLGDGAVKGSLRYDVSGLGRWDSALVAF-AR 78

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
            M    G+   +  +     L        +    N+    +    +  ++   +G   + 
Sbjct: 79  MMRAAAGEGANKRFTLDESTLPEAALRLLKLAETNEPLPSASGDKAAASVVARVGHGTLG 138

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           F  +  + A ++G  +             +   + ++  M   G + + +V +++ + GA
Sbjct: 139 FGAELGAIATLVGESVFGVARGLGGRAFTRS--VDILHLMREAGANALVIVAIVNGLIGA 196

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           ++A  GA QL +FGA IF  DL+ I  +RE+  ++TA+++AGR+G A  A + +M+ NEE
Sbjct: 197 ILAFVGAVQLQRFGAGIFVADLVGIAMVREMAAVMTAIVMAGRTGGAYAAHLATMQGNEE 256

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA++ +G+     L+ PR+ AL+  +PLL +      ++G  +V     D+    F  +
Sbjct: 257 IDALKVLGIPAYDFLVLPRVVALVTMMPLLYLYGCAIGLLGGFVVSLAILDMSATTFLDQ 316

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                       GL+K+      + +     G   G  +  +G+  T+ VV  I  VI +
Sbjct: 317 IQGAIAGRQFAIGLVKSVAFGFLVALAGCHIGLRAGRSAADVGRAATSAVVVGIVGVIAL 376

Query: 361 DSLFAIFYFAIGI 373
           D++FA+    +GI
Sbjct: 377 DAVFAVCADRLGI 389


>gi|167626717|ref|YP_001677217.1| ABC-type transport system permease [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|241667292|ref|ZP_04754870.1| ABC-type transport system permease protein [Francisella
           philomiragia subsp. philomiragia ATCC 25015]
 gi|254875843|ref|ZP_05248553.1| ABC transporter, permease protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|167596718|gb|ABZ86716.1| ABC-type transport system permease protein [Francisella
           philomiragia subsp. philomiragia ATCC 25017]
 gi|254841864|gb|EET20278.1| ABC transporter, permease protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 254

 Score =  212 bits (541), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 64/221 (28%), Positives = 120/221 (54%)

Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209
           K  +   I Q+  VGV+ + +++      G V++ QG + LS+FGA      ++++  LR
Sbjct: 32  KLSIRDCITQIKAVGVNSIIIIVTSGIFIGLVLSLQGYYTLSKFGAHSLLGVMVALSVLR 91

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
           E+G ++TA++ AGR+ S+I +EIG MK  ++I++++ M ++ +  ++S R WA +IS P+
Sbjct: 92  ELGPVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFILSTRFWACVISGPI 151

Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329
           L ++    AI+   ++      I +  F+S   S+ T+++I  G+IK+   A     +A+
Sbjct: 152 LALIFATVAILAGFVLAEAGLGISYGEFWSNIQSSVTISDITNGIIKSLVFAFITAWIAL 211

Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            +G+     SN + K  T  VV     V+  D +     F 
Sbjct: 212 YQGYYCIADSNGIAKATTKTVVYCCMSVLGADLILTSIMFG 252


>gi|189184336|ref|YP_001938121.1| toluene export ABC transporter permease protein [Orientia
           tsutsugamushi str. Ikeda]
 gi|189181107|dbj|BAG40887.1| toluene export ABC transporter permease protein [Orientia
           tsutsugamushi str. Ikeda]
          Length = 288

 Score =  212 bits (541), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 60/257 (23%), Positives = 120/257 (46%), Gaps = 7/257 (2%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           IG++ +K   +     + L   I          +    +    I+ +  +G   +P+V  
Sbjct: 36  IGQRTIKIFYNIILFQNFLFASIKGI-------FTLPYYFNITIQAIINIGFYSLPIVAA 88

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
            S  +GAV+A Q    + +  A      ++     RE+G ++  +++AGR G+++VAEIG
Sbjct: 89  TSLCSGAVLALQTYEGVVRSSAIHAIPMIIVTSITRELGPVIVGLIVAGRIGASMVAEIG 148

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           +M++ E+IDA+ T+  D ++ L++PR+ A  +SLP L + ++   + G  +V     +  
Sbjct: 149 TMRVTEQIDALFTLATDPIKYLVTPRLVATTLSLPFLVLTSDVIGVFGGYLVSVYRLNFN 208

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              +        T  ++ +GLIKA      IGI +   G+     +  +G   T  VV S
Sbjct: 209 SYEYIQSTIHHLTSNDVISGLIKAIVFGMIIGITSCFHGYYSDKGAKGVGIATTYGVVHS 268

Query: 354 ISIVIIIDSLFAIFYFA 370
             ++++ + +      +
Sbjct: 269 SILILLSNYIMTELLLS 285


>gi|283852492|ref|ZP_06369760.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B]
 gi|283572100|gb|EFC20092.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B]
          Length = 256

 Score =  212 bits (541), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 73/249 (29%), Positives = 134/249 (53%), Gaps = 1/249 (0%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLS-LIRQMYYVGVSGVPVVILISFVT 178
           K  ND+ +   ++  +++      +   + K +  S +   M ++G   +P++ +IS   
Sbjct: 3   KAGNDTATLVWLVTGLLACARASLSPLTRVKTYQRSRIWSHMAWIGADSLPIISIISACV 62

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G ++A Q A QL + GA  +  +L+    + E+G LLT +++AGR+G+A  AEI +M+I+
Sbjct: 63  GIILALQAATQLEKVGALSYVANLVGFSIITELGPLLTCLILAGRAGAAFTAEIATMQIS 122

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+  MGLD VR L+ P+  A+ +  PLLT+  +   I    +    +  +    +F
Sbjct: 123 EEIDALEVMGLDPVRFLVWPKFLAMCVMAPLLTLWGDAVGITAGGVFSALFLGLAGKAYF 182

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
            +     T+ ++  GL+K+     AI IV+  +GF     +  +G++ T  VV+SI ++I
Sbjct: 183 LQTAHFLTMRDLLAGLVKSAGFGVAITIVSCWQGFLAKEGAADVGRRTTKAVVESIFLMI 242

Query: 359 IIDSLFAIF 367
           ++D  F   
Sbjct: 243 LLDLFFTAL 251


>gi|303256524|ref|ZP_07342538.1| toluene tolerance ABC transporter, permease protein
           [Burkholderiales bacterium 1_1_47]
 gi|331000622|ref|ZP_08324280.1| toluene tolerance protein Ttg2B [Parasutterella excrementihominis
           YIT 11859]
 gi|302860015|gb|EFL83092.1| toluene tolerance ABC transporter, permease protein
           [Burkholderiales bacterium 1_1_47]
 gi|329571184|gb|EGG52889.1| toluene tolerance protein Ttg2B [Parasutterella excrementihominis
           YIT 11859]
          Length = 263

 Score =  212 bits (541), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 71/267 (26%), Positives = 133/267 (49%), Gaps = 8/267 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N    +G   +  +    + +  L  ++ N G                ++Q+Y+VG  
Sbjct: 4   IFNWISSVGAWALSGVRTLGNFSRFLFRLVVNLGPSFTR-------FQDTLKQLYFVGNY 56

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++++     G V+  QG + LS +G+E     L+++  LRE+G ++TA++ AGR+G+
Sbjct: 57  SLVIILVSGLFVGFVLGLQGDYVLSSYGSEQALGVLVALSLLRELGPVVTALLFAGRAGT 116

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           ++ AEIG M   E++ A+  MG+D +R ++ PR  A +IS+PLL I+ +   IIG+ +V 
Sbjct: 117 SLTAEIGLMNAGEQLSALEMMGVDPIRRILGPRFLACVISMPLLAIMFSAVGIIGSWVVA 176

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                +    F+++  +   +  +I  G+IK      A+G +A+ EG+        +   
Sbjct: 177 VPLIGLDSGAFWAQMQAGVEVGPDIGNGIIKTFVFGVAVGAIALYEGYTARATPEGVSSA 236

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAIG 372
            T  VV S  +V+ +D +   F F  G
Sbjct: 237 TTRTVVVSSLVVLGLDFILTAFMFTHG 263


>gi|225850834|ref|YP_002731068.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Persephonella marina
           EX-H1]
 gi|225645536|gb|ACO03722.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Persephonella marina
           EX-H1]
          Length = 248

 Score =  212 bits (540), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 74/252 (29%), Positives = 125/252 (49%), Gaps = 7/252 (2%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +KI  F+  + +   +    +        S  K K     +++ M  +GV+  P++ +  
Sbjct: 2   EKIKNFVEHTGAAFLLF---LETLKVIILSPPKVKH----ILKYMEEIGVTAAPLIAITG 54

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
           F TG V+  +      +F AE     L+S+   RE+  +L A+++  RSGSA+ A IG+M
Sbjct: 55  FFTGGVLVVETYPTFHKFNAEFLIGALVSLSLSRELSPVLVALLVTARSGSAMAANIGTM 114

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           KI E+IDA++ M ++ VR LI+PR+ A ++ +P L IL+    ++G   V    Y I   
Sbjct: 115 KITEQIDALKVMAVNPVRYLIAPRLIASLLMVPALVILSYTFGLLGGYFVGVNLYGINPY 174

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           +F  +      L +I  GL K+   A  I IV+   G+     +  +G+  TT VV S  
Sbjct: 175 LFVEKMKDFTELYDILGGLYKSMGFATIITIVSCYFGYVTKGGAEGVGRSTTTAVVVSSV 234

Query: 356 IVIIIDSLFAIF 367
           +V+I+D      
Sbjct: 235 LVLIVDYFLTAI 246


>gi|307150966|ref|YP_003886350.1| hypothetical protein Cyan7822_1067 [Cyanothece sp. PCC 7822]
 gi|306981194|gb|ADN13075.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7822]
          Length = 266

 Score =  212 bits (540), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 65/239 (27%), Positives = 114/239 (47%), Gaps = 1/239 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           L   I  TG      +  K    + + QM  VG + + + ++ + V G +   Q A +  
Sbjct: 18  LWAAILLTGRVVFYLFTRKIDARNTLEQMMAVGPASLAIALITATVIGMIFTIQVAREFL 77

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
             GA      ++++   RE+  ++ AV++AGR GSA  AEIG+M++ E+IDA+  +  D 
Sbjct: 78  ALGAGSAVGGILALALSRELCPIMMAVVVAGRVGSAFAAEIGTMRVTEQIDALYMLNADP 137

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A  I +P LT+LA  + + G  ++I ++Y I   VF     +   + ++ 
Sbjct: 138 VEYLVIPRVVACCIMVPALTVLALITGLAGGLLMI-RFYGIADTVFLESIQNFVRVWDVI 196

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            G IK     C I I+    G      +  +G+  T  VV  +  + I + + +   F 
Sbjct: 197 CGPIKGIVFGCLIAIIGCNWGLTTTGGAKGVGESTTAAVVTCLLAIFIANFILSWIMFK 255


>gi|307731184|ref|YP_003908408.1| hypothetical protein BC1003_3170 [Burkholderia sp. CCGE1003]
 gi|307585719|gb|ADN59117.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1003]
          Length = 259

 Score =  212 bits (539), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 59/265 (22%), Positives = 133/265 (50%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             +L   +G+ +++ +  +         ++                   + +Q+++VG  
Sbjct: 2   IGSLISTVGRSVLEGLGTAGYATRFFFRLLFEFFALLRRP-------RLVTKQIHFVGNY 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+
Sbjct: 55  SLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGT 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           ++ AEIG MK  E++ A+  M +D V+++++PR+WA IIS+P+L  + +   ++G  +V 
Sbjct: 115 SLTAEIGLMKAGEQLTAMEMMAVDPVKVVVAPRLWAGIISMPILAAIFSAVGVLGGYVVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                +    F+S+      +  ++  G++K+     A+  VA+ +G+        + + 
Sbjct: 175 VLLIGVDAGAFWSQMQGGVDVWRDVGAGVVKSVVFGLAVTFVALFQGYEARPTPEGVSRA 234

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV +   V+ +D L     F+
Sbjct: 235 TTKTVVYASLAVLGLDFLLTALMFS 259


>gi|323527530|ref|YP_004229683.1| hypothetical protein BC1001_3209 [Burkholderia sp. CCGE1001]
 gi|323384532|gb|ADX56623.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1001]
          Length = 259

 Score =  212 bits (539), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 59/265 (22%), Positives = 131/265 (49%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             +L   +G+ ++  +  +         ++                   + +Q+++VG  
Sbjct: 2   IGSLISTLGRSVLDGLGTAGYATRFFFRLLFQFFPLLRRP-------RLVTKQIHFVGNY 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+
Sbjct: 55  SLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGT 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           ++ AEIG MK  E++ A+  M +D V+++++PR+WA IIS+P+L  + +   + G  +V 
Sbjct: 115 SLTAEIGLMKAGEQLTAMEMMAVDPVKVVVAPRLWAGIISMPILAAIFSAVGVAGGYVVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                +    F+S+      +  ++  G++K+     A+  VA+ +G+        + + 
Sbjct: 175 VLLIGVDAGAFWSQMQGGVDVWRDVGAGVVKSVVFGLAVTFVALFQGYEARPTPEGVSRA 234

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV +   V+ +D L     F+
Sbjct: 235 TTKTVVYASLAVLGLDFLLTALMFS 259


>gi|149277771|ref|ZP_01883911.1| ABC transporter, permease [Pedobacter sp. BAL39]
 gi|149231459|gb|EDM36838.1| ABC transporter, permease [Pedobacter sp. BAL39]
          Length = 269

 Score =  212 bits (539), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 67/244 (27%), Positives = 120/244 (49%), Gaps = 1/244 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               L  V      F    +        L+RQ Y +G   + ++ L  F+TG V  +Q  
Sbjct: 24  MFLTLYDVCQFVTRFFKEGFLPPYEGKELMRQCYDIGYRSLALISLTGFITGVVFTKQSR 83

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L++FGA  +   L+ I  LR +  LLTA++ AG+ GS+I AE+GSM++ E+IDA+   
Sbjct: 84  PSLAEFGATSWLPSLVGIALLRTLAPLLTALIAAGKVGSSIGAELGSMRVTEQIDAMEVS 143

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
             +  + L+S R+ A  I++P+LT       ++GA + +  + D     FF     + T 
Sbjct: 144 ATNPFKFLVSTRVMASTITIPILTFYTAMVGMLGALLNVSLFEDTSARAFFQMSLESITF 203

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +I    +KA      IG+V   +G+     +  +GK   + VV  + ++ I + + ++ 
Sbjct: 204 LDITASTVKAILFGFTIGMVGCYQGYNSSKGTEGVGKAANSAVVIGMFLIFI-EEVISVQ 262

Query: 368 YFAI 371
           +F++
Sbjct: 263 FFSL 266


>gi|312888834|ref|ZP_07748397.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM
           18603]
 gi|311298709|gb|EFQ75815.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM
           18603]
          Length = 267

 Score =  212 bits (539), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 67/257 (26%), Positives = 118/257 (45%)

Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171
             I K    F          L  V      F    +        +++Q Y VGV  + ++
Sbjct: 7   TAIAKTGFSFKRWLTGIFIDLYNVYKFVLRFFKEVFFPPYEFKEILKQCYDVGVKSLLLI 66

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
            +  F+ G +  +Q    LS+FGA  +   L+SI  LR +  L+TA++ AG+ GS+I AE
Sbjct: 67  SVTGFIVGVIFTKQSRPSLSEFGATSWLPSLVSIAILRALASLVTALIAAGKVGSSIGAE 126

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           +GSM++ E+IDA+   G    + L+  R+ A  I++PLL     F A++G  + + +   
Sbjct: 127 LGSMRVTEQIDAMEVSGTKPFKYLVCTRVLATTITIPLLASYTAFIALLGGYLNVSQNEG 186

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
             +  F  +     T  + ++ L K+      IGIV   +G+     +  +GK     VV
Sbjct: 187 TSYTTFMEQVFEPLTFIDFWSTLAKSIMFGFTIGIVGCYQGYNSSRGTEGVGKAANAAVV 246

Query: 352 QSISIVIIIDSLFAIFY 368
            ++ +V I + +    +
Sbjct: 247 TAMFLVFIEEVIIVQIF 263


>gi|193215278|ref|YP_001996477.1| hypothetical protein Ctha_1571 [Chloroherpeton thalassium ATCC
           35110]
 gi|193088755|gb|ACF14030.1| protein of unknown function DUF140 [Chloroherpeton thalassium ATCC
           35110]
          Length = 265

 Score =  212 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 57/245 (23%), Positives = 122/245 (49%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +   S   ++      +     +    K +   ++ Q Y  G   +P+V++ S   G+++
Sbjct: 14  DRIKSFFLVMQEFFLFSLRTFTTIGAIKKYWRDILNQAYISGTESIPIVLVSSISIGSLL 73

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
             +   QL +FGA++ +    ++  +RE+G +LT +M++ R G+   +E+G+MKI+E+ID
Sbjct: 74  TMEVGNQLEEFGAKLMTGRTTALSVIRELGPMLTGLMLSARVGARNGSELGAMKISEQID 133

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R  G D +  L+ PR+ A ++    LT L++F+ +   +++   Y+ I    +++   
Sbjct: 134 ALRAFGTDPIAKLVMPRLIASLLMFLPLTALSDFAGLTSGALIAEHYHHIDPGFYWNSVL 193

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           +   + +   G +K P  A  I +V+   GF     +  +G+     +V S  +V+I + 
Sbjct: 194 NLLIVKDFVVGFLKPPVFAVIITLVSCFNGFDATGGTAGVGRSTIKGIVVSSGLVLIANF 253

Query: 363 LFAIF 367
             +  
Sbjct: 254 YVSKL 258


>gi|256424262|ref|YP_003124915.1| hypothetical protein Cpin_5283 [Chitinophaga pinensis DSM 2588]
 gi|256039170|gb|ACU62714.1| protein of unknown function DUF140 [Chitinophaga pinensis DSM 2588]
          Length = 264

 Score =  212 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 67/246 (27%), Positives = 119/246 (48%), Gaps = 7/246 (2%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           I K I  F  D  +    +G +          ++K    +  +IRQ Y VG   + ++ +
Sbjct: 13  ISKGIDGFFKDIFNIVLFIGRI-------FKEAFKRPVEIREVIRQCYQVGYKSLALITM 65

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
             F+TG V  +Q    LS+FGA  +   L++I  +R +  L+TA++ AG+ GS+I AE+ 
Sbjct: 66  TGFITGLVFTKQSRPSLSEFGATSWLPSLIAIAVIRALAPLVTALICAGKVGSSIGAELA 125

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           SM++ E+IDA+    ++  + L++ R+ A  IS+P+L        ++G+ + I       
Sbjct: 126 SMRVTEQIDAMEVSAINPFKFLVTTRVMATTISIPILVGYTGLVGLLGSFLDIHLNEQTS 185

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
           F  FF          +  T  +KA      IG+V+  +G+     +  +GK     VV S
Sbjct: 186 FTSFFQEAFKNIYFLDFITTGVKAVVFGFTIGVVSCYQGYHATQGTQGVGKAANISVVIS 245

Query: 354 ISIVII 359
           + ++ I
Sbjct: 246 MFLIFI 251


>gi|91203173|emb|CAJ72812.1| similar to ABC-type transport system permease protein [Candidatus
           Kuenenia stuttgartiensis]
          Length = 258

 Score =  212 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 69/254 (27%), Positives = 128/254 (50%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           ++   +        +G V     +     +        L++++   G     +V +I+  
Sbjct: 4   LISIDHTVKKFLLSMGQVTLLAFKGFWGIFLPPFNPKLLLKEIDNFGAGSFLLVNIIALF 63

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG V++ Q  + L  +GAE++   ++S+  +RE+G +LT++M+  R GS I AEIGSM++
Sbjct: 64  TGMVMSLQTIYGLRMYGAEMYVGSVVSLSIVRELGPVLTSIMVGARIGSGIAAEIGSMQV 123

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+R +G   ++ L+SP+I+A +I+LPLLT+ A+F  I G  I+     DI    +
Sbjct: 124 TEQIDAMRALGASPIKKLVSPKIFAGLITLPLLTVTADFIGIFGGLIIATFELDIDHIFY 183

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            +   +T T+++  +G+ K  F    I ++    G      +  +G+  T  VV     +
Sbjct: 184 INSILTTITISDFISGIGKTVFFGLLIAVIGCYFGLKTSGGTTGVGRSTTISVVTISISI 243

Query: 358 IIIDSLFAIFYFAI 371
           +I D      +  I
Sbjct: 244 LIADFFLTKLFLMI 257


>gi|187925542|ref|YP_001897184.1| hypothetical protein Bphyt_3570 [Burkholderia phytofirmans PsJN]
 gi|187716736|gb|ACD17960.1| protein of unknown function DUF140 [Burkholderia phytofirmans PsJN]
          Length = 255

 Score =  212 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 60/262 (22%), Positives = 130/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +         ++                   + +Q+++VG   + 
Sbjct: 1   MISAIGRSVIGGLGTAGYATRFFFRLLLEFFPLLRRP-------RLVTKQIHFVGNYSLV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D V+++++PR+WA IIS+P+L  + +   + G  +V    
Sbjct: 114 AEIGLMKAGEQLTAMEMMAVDPVKVVVAPRLWAGIISMPILAAIFSAVGVFGGYVVGVLL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+      +  ++  G+IK+     A+  VA+ +G+        + +  T 
Sbjct: 174 IGVDAGAFWSQMQGGVDVWRDVGAGVIKSVVFGLAVTFVALFQGYEAKPTPEGVSRATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVYASLAVLGLDFLLTALMFS 255


>gi|296159550|ref|ZP_06842374.1| protein of unknown function DUF140 [Burkholderia sp. Ch1-1]
 gi|295890258|gb|EFG70052.1| protein of unknown function DUF140 [Burkholderia sp. Ch1-1]
          Length = 255

 Score =  212 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 60/262 (22%), Positives = 130/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +         ++                   + +Q+++VG   + 
Sbjct: 1   MISAIGRSVLDGLGTAGYATRFFFRLLLEFFALLRRP-------RLVTKQIHFVGNYSLV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLTRYGSEEALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D V+++I+PR+WA IIS+P+L  + +   + G  +V    
Sbjct: 114 AEIGLMKAGEQLTAMEMMAVDPVKVVIAPRLWAGIISMPILAAIFSAVGVFGGYVVGVLL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+      +  ++  G++K+     A+  VA+ +G+        + +  T 
Sbjct: 174 IGVDAGAFWSQMQGGVDVWHDVGAGVVKSVVFGLAVTFVALFQGYEAKPTPEGVSRATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVYASLAVLGLDFLLTALMFS 255


>gi|58584874|ref|YP_198447.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Wolbachia endosymbiont
           strain TRS of Brugia malayi]
 gi|58419190|gb|AAW71205.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Wolbachia endosymbiont
           strain TRS of Brugia malayi]
          Length = 260

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 61/243 (25%), Positives = 114/243 (46%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG       +     +    +L ++ +Q+  +G   +P+V L     GAVI  
Sbjct: 16  FIKLLLRLGSAFIFFIQSLYHCFVPPYYLGNIAKQIIEIGFFSLPIVGLTGIFIGAVIVL 75

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q +        E     L+++  ++E+G +L ++++ G+ GS+I AEIG+M+I E+IDA+
Sbjct: 76  QSSLSGPLISPEQIIPKLVTVTIIKELGPVLISLIMVGKVGSSIAAEIGTMRITEQIDAL 135

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            T+ ++  + LI+PRI A +I  P+ TI A+   I G  I     ++    ++       
Sbjct: 136 TTLNINPFKYLIAPRILASVIVFPIFTICADLIGIFGGYITAVFKFNHNLNIYIKYTTQF 195

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             + N  TGLIKA      I + +   G+     +  +    T+ VV S  ++I+ + + 
Sbjct: 196 FNMYNFITGLIKATAFGAIISVSSCYYGYHCQEGARGVSIATTSTVVLSSILIILANYMI 255

Query: 365 AIF 367
            + 
Sbjct: 256 TLI 258


>gi|299768645|ref|YP_003730671.1| toluene tolerance protein Ttg2B [Acinetobacter sp. DR1]
 gi|298698733|gb|ADI89298.1| toluene tolerance protein Ttg2B [Acinetobacter sp. DR1]
          Length = 259

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 78/264 (29%), Positives = 132/264 (50%), Gaps = 10/264 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G+ +++ I    + AH+L  +I +           KG       QM+ VGV  +
Sbjct: 2   NTIAWLGRLVIERIRGIGAAAHMLLQIIFSL--------PSKGGFGRFGYQMHRVGVMSL 53

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     GAV+  Q    L  FGAE      +S+  LRE+  ++ A++ AGR+GSA+
Sbjct: 54  LIITVSGLFIGAVLGLQMYSILVTFGAESMLGTAISLTLLRELASVVAALLFAGRAGSAL 113

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIGSMK +E++ ++  +G+D ++ ++SPR+WA I+SLP+LT++     IIG  +V   
Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIIGGKMVGVD 173

Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTG-LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
           +       F+S   +T     +I  G +IK+   A     VA+ +G+A       +   +
Sbjct: 174 FLGADEGSFWSGMQNTVRFGHDIINGTIIKSIVFALICTWVAVYQGYACDPTPEGIATAM 233

Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370
           T  VV S   V+  D +     F 
Sbjct: 234 TRTVVYSSLCVLGFDFVLTAVMFG 257


>gi|297603137|ref|NP_001053506.2| Os04g0553000 [Oryza sativa Japonica Group]
 gi|38345475|emb|CAE01691.2| OSJNBa0010H02.13 [Oryza sativa Japonica Group]
 gi|255675668|dbj|BAF15420.2| Os04g0553000 [Oryza sativa Japonica Group]
          Length = 344

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 110/236 (46%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
            +   G+        +    +L+ Q+  VG     V +L +   G     Q   + ++ G
Sbjct: 98  ALLLAGQVFHRVLTGRVHRRNLLAQLRRVGPGSAGVSLLTAAFVGMAFTIQFVREFTRLG 157

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
                  ++++   RE+  ++TAV+ AGR GSA  AE+G+M+++E+ D +R +G   V  
Sbjct: 158 LHRSVGGVLALALSRELSPVVTAVVAAGRVGSAFAAELGTMQVSEQTDTLRVLGAQPVDY 217

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L+ PR+ A +++LP+LT+++    +  ++ +    + +  ++            ++ + L
Sbjct: 218 LVVPRVVACVLALPVLTLMSFALGLASSAFLADSIFGVSTSIILESARRALRPWDLISSL 277

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +K+      I +V+   G      +  +G+  T+ VV S+  + + D   +  +F 
Sbjct: 278 LKSQVFGAIIAVVSCAWGVTTHGGAKGVGESTTSAVVVSLVGIFVADFALSCLFFQ 333


>gi|307544520|ref|YP_003896999.1| ABC transporter permease [Halomonas elongata DSM 2581]
 gi|307216544|emb|CBV41814.1| probable ABC-type transport system permease protein [Halomonas
           elongata DSM 2581]
          Length = 260

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 70/256 (27%), Positives = 133/256 (51%), Gaps = 2/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           ++I +     C+    LG       +        +G +   +RQM++VGV  + +V++  
Sbjct: 3   ERIARLGRWGCNTLESLGDAGIFLVQSMFGKPSAEG-MRLWLRQMHFVGVMSLAIVLVSG 61

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L  FGAE     ++++  LRE+  ++ A++ AGR+GSA+ AEIG M
Sbjct: 62  LFIGMVLALQGYTILVDFGAEDALGQMVALSLLRELAPVVAALLFAGRAGSALTAEIGLM 121

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D +R +++PR+WA  ++LPLLTI      + G  +V  ++  +   
Sbjct: 122 KATEQLTSMEMIGVDPLRRVVAPRLWAGFVALPLLTIGFGVVGVWGGQLVGVQWLGVFEG 181

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            ++    ++    A++  GLIK+   A  +  +A+ +G+A+   S  + +  T  VV + 
Sbjct: 182 SYWGNMQASVDFIADVGNGLIKSLVFALVVTWIAVYQGYALVPTSEGISRATTRTVVYAS 241

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 242 LAVLGLDFILTAVMFG 257


>gi|186684564|ref|YP_001867760.1| hypothetical protein Npun_F4449 [Nostoc punctiforme PCC 73102]
 gi|186467016|gb|ACC82817.1| protein of unknown function DUF140 [Nostoc punctiforme PCC 73102]
          Length = 218

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 60/213 (28%), Positives = 105/213 (49%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           ++ +   G   +  V+L+S   G +   Q A +L +FGAE       ++   RE+  +LT
Sbjct: 1   MQHLVTAGPGSISPVLLVSGFAGMIFTIQTARELVRFGAENAVGGAFALAFCRELAPILT 60

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A ++AG+ GSA  AEIG+M++ E+IDA+  +  D +  L+ PR+ A  + +PL+TILA  
Sbjct: 61  ASIMAGQVGSAFAAEIGAMRVTEQIDALYMLKTDPIDYLVLPRVIACCLMVPLMTILALV 120

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           + IIG       +Y I    F     +    +++F  L+K       + ++    G    
Sbjct: 121 TGIIGGVFAGSYFYKIIPETFLESVRNFLEPSDLFIILLKGFIFGVLVAVIGCSWGLTTK 180

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
             +  +G+  T  VV S   + I+D   ++  F
Sbjct: 181 GGAKEVGESATKAVVTSWVSIFIMDFFLSLLLF 213


>gi|126643117|ref|YP_001086101.1| toluene tolerance efflux transporter [Acinetobacter baumannii ATCC
           17978]
          Length = 235

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 64/221 (28%), Positives = 116/221 (52%), Gaps = 1/221 (0%)

Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210
           G     + QM+ VGV  + ++ +     G V+  QG   L   G+E     ++S+  LRE
Sbjct: 13  GGFGRFVYQMHRVGVMSLLIITVSGLFIGLVLGLQGYSILVNVGSESMLGTMVSLTLLRE 72

Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
           +  ++ A++ AGR+GSA+ AEIGSMK +E++ ++  +G+D ++ ++SPR+WA I+SLP+L
Sbjct: 73  LAPVVAALLFAGRAGSALTAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPML 132

Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAM 329
           T++     I+G  +V   +  +    F+S   +      ++  G+IK+   A     +A+
Sbjct: 133 TVIFAAIGIVGGKLVGVDFLGVDEGSFWSGMQNNVQFGHDVVNGIIKSIVFALLCTWIAV 192

Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            +G+A       +   +T  VV S   V+  D +     F 
Sbjct: 193 FQGYACDPTPEGIATAMTRTVVYSSLCVLGFDFVLTAVMFG 233


>gi|89054229|ref|YP_509680.1| hypothetical protein Jann_1738 [Jannaschia sp. CCS1]
 gi|88863778|gb|ABD54655.1| protein of unknown function DUF140 [Jannaschia sp. CCS1]
          Length = 260

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 64/251 (25%), Positives = 117/251 (46%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                +      +G +     +          ++    RQ   +G   +PVV L +F TG
Sbjct: 9   ALGRATLIALATIGQIALFALDALRHLATPPFYIRETARQFLTIGWLSLPVVGLTAFFTG 68

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
             +A Q     ++F AE     +++I   RE+G +L  +M+AGR  +AI AEI +MK+ E
Sbjct: 69  GALALQIYAGGARFNAEAVVPQIVAISIARELGPVLGGLMVAGRVAAAIAAEIATMKVTE 128

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +IDA+RT+    ++ L +PR+ A  +SLP+L  + +   I G  +V     D   A + S
Sbjct: 129 QIDALRTLSTHPMKYLTAPRLIAATLSLPVLVAVGDSIGIFGGYLVSTSRLDFNPAAYLS 188

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                 T+ ++ +GL+K       + ++    G   G  +  +G+  T  VV +  +++ 
Sbjct: 189 NTRDFLTIRDVTSGLVKGAVFGFIVALMGCYHGMNSGRGARGVGRATTQAVVSASILILA 248

Query: 360 IDSLFAIFYFA 370
            + L    +F+
Sbjct: 249 ANYLLTEAFFS 259


>gi|91785391|ref|YP_560597.1| ABC transporter inner membrane protein [Burkholderia xenovorans
           LB400]
 gi|91689345|gb|ABE32545.1| Putatitive ABC transporter, inner membrane subunit, toluene
           tolerance Ttg2B-like protein [Burkholderia xenovorans
           LB400]
          Length = 255

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 61/262 (23%), Positives = 130/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +         ++                   + +Q+++VG   + 
Sbjct: 1   MISAIGRSVLDGLGTAGYATRFFFRLLLEFFPLLRRP-------RLVTKQIHFVGNYSLV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLTRYGSEEALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D V+I+I+PR+WA IIS+P+L  + +   + G  +V    
Sbjct: 114 AEIGLMKAGEQLTAMEMMAVDPVKIVIAPRLWAGIISMPILAAIFSAVGVFGGYVVGVLL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+      +  ++  G++K+     A+  VA+ +G+        + +  T 
Sbjct: 174 IGVDAGAFWSQMQGGVDVWHDVGAGVVKSVVFGLAVTFVALFQGYEAKPTPEGVSRATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVYASLAVLGLDFLLTALMFS 255


>gi|296125262|ref|YP_003632514.1| hypothetical protein Bmur_0208 [Brachyspira murdochii DSM 12563]
 gi|296017078|gb|ADG70315.1| protein of unknown function DUF140 [Brachyspira murdochii DSM
           12563]
          Length = 268

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 67/248 (27%), Positives = 118/248 (47%), Gaps = 2/248 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               LG       E    +++       L  Q+  +GV    V  +    TG V++ Q A
Sbjct: 21  FLATLGEFAFLIIEVFRYTFRSSFSFKLLKEQIIRMGVDSFVVAAVTVLCTGMVMSLQIA 80

Query: 188 FQLSQF--GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
             L     G   F   ++    ++E+  +L A++ AGR GS++ AEIG+M+++E++DA++
Sbjct: 81  VVLDSVLKGISQFVGSMVGKAMVKELSPMLLALIFAGRVGSSVTAEIGTMQVSEQLDALK 140

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           T+  + +  +  PR WA +ISLP+LT+ AN   ++G +IV           +F R  +  
Sbjct: 141 TLYTNPIEYVAVPRFWAAVISLPMLTVSANIIGVVGGAIVTVFVLHSDPMHYFDRAIAVI 200

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           ++ +    LIK+      + I++   GF     +  +GK  TT VV S  I++I D +  
Sbjct: 201 SVGDFIGSLIKSTIFGAEVIIISCFYGFRTSGGAEGVGKATTTSVVYSFMIILITDYILV 260

Query: 366 IFYFAIGI 373
                 G+
Sbjct: 261 SILGLFGM 268


>gi|116749878|ref|YP_846565.1| hypothetical protein Sfum_2450 [Syntrophobacter fumaroxidans MPOB]
 gi|116698942|gb|ABK18130.1| protein of unknown function DUF140 [Syntrophobacter fumaroxidans
           MPOB]
          Length = 266

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 78/253 (30%), Positives = 126/253 (49%), Gaps = 4/253 (1%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKG-FLLSLIRQMYYVGVSGVPVVILISF 176
            + F+    S A++                + K   L + + QM  VGV  +P+V L+SF
Sbjct: 14  TILFLRHLTSIAYLF---RDTMRWAIVKPLQGKPLRLRAALIQMDEVGVKSIPIVALVSF 70

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
           V G ++  Q A+QL +FGA  ++  L  +   RE+  LLTA+++AGR  +A  AE+G+M 
Sbjct: 71  VIGIILVLQTAYQLEKFGAINYAASLAGVALTREMAPLLTAIVVAGRVSAAFTAELGTML 130

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           + EEI A+  M ++ V  L+ PR  A+++ LP LT+LA+   +IG   V      I  ++
Sbjct: 131 VTEEILALEVMAINPVAYLVVPRFIAMLVMLPCLTVLADLIGMIGGYAVGTTAVGIRSSL 190

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +         L +I TGL K+   A  I +V     F V   +  +GK     VV S+  
Sbjct: 191 YIQNTIDALLLKDILTGLTKSVVFAGIIAMVGCYMAFVVRGGAEGVGKATMISVVTSLIS 250

Query: 357 VIIIDSLFAIFYF 369
           +I+ D  F   ++
Sbjct: 251 IILADCFFTTVFY 263


>gi|303246825|ref|ZP_07333102.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans
           JJ]
 gi|302491842|gb|EFL51722.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans
           JJ]
          Length = 254

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 70/246 (28%), Positives = 129/246 (52%), Gaps = 1/246 (0%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLS-LIRQMYYVGVSGVPVVILISFVTGAV 181
            ++ +   ++  ++           + K +L S     M ++G   +P++ +IS   G +
Sbjct: 4   GEAATLVWLVSGLMRCARGTVNPLRRTKTYLRSRTWSHMAWIGADSLPIISIISACVGII 63

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A Q A QL + GA  +  +L+    + E+G LLT +++AGR+G+A  AEI +M+I+EEI
Sbjct: 64  LALQSATQLEKVGAMSYVANLVGYSIITELGPLLTCLILAGRAGAAFTAEIATMRISEEI 123

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  MG+D VR L+ P+  A+ +  PLLT+  +   I    I       +    +F + 
Sbjct: 124 DALEVMGVDPVRFLVWPKFAAMCVMAPLLTLWGDCIGISAGGIFSALALGLSGKAYFLQT 183

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
               T+ ++ +GL+K+      I I++  +GF     +  +G++ T  VVQSI ++I++D
Sbjct: 184 AGFLTMRDLLSGLVKSAGFGVTITIISCWQGFLAREGAADVGRRTTRAVVQSIFLMILLD 243

Query: 362 SLFAIF 367
             F   
Sbjct: 244 LFFTAL 249


>gi|59802415|ref|YP_209127.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae FA
           1090]
 gi|194100076|ref|YP_002003216.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae NCCP11945]
 gi|239998068|ref|ZP_04717992.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae 35/02]
 gi|240079831|ref|ZP_04724374.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae FA19]
 gi|240112039|ref|ZP_04726529.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae MS11]
 gi|240116987|ref|ZP_04731049.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae PID1]
 gi|240122625|ref|ZP_04735581.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae PID332]
 gi|240127329|ref|ZP_04739990.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae SK-93-1035]
 gi|268593920|ref|ZP_06128087.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae
           35/02]
 gi|268595976|ref|ZP_06130143.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae FA19]
 gi|268598097|ref|ZP_06132264.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae MS11]
 gi|268602671|ref|ZP_06136838.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID1]
 gi|268681221|ref|ZP_06148083.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID332]
 gi|268685698|ref|ZP_06152560.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae
           SK-93-1035]
 gi|59719310|gb|AAW90715.1| putative abc transport protein, inner membrane protein [Neisseria
           gonorrhoeae FA 1090]
 gi|193935366|gb|ACF31190.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae NCCP11945]
 gi|268547309|gb|EEZ42727.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae
           35/02]
 gi|268549764|gb|EEZ44783.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae FA19]
 gi|268582228|gb|EEZ46904.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae MS11]
 gi|268586802|gb|EEZ51478.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID1]
 gi|268621505|gb|EEZ53905.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID332]
 gi|268625982|gb|EEZ58382.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae
           SK-93-1035]
          Length = 258

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 130/262 (49%), Gaps = 8/262 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G K +  I    S    L  +++ +G   A            +RQ+Y+ GV  V
Sbjct: 2   NFIRSVGAKTLGLIQSFGSITLFLLNILAKSGTAFARP-------RLSVRQVYFAGVLSV 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            +V +     G V+  QG  QLS+F +      +++   LRE+G +L A++ A  +G A+
Sbjct: 55  LIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAM 114

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            +EIG MK   +++A+  M ++ V  +++PR WA + S+PLL  + N + I GA +V   
Sbjct: 115 TSEIGLMKTTGQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVS 174

Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +   +F+ +  +  T+  ++  GLIK+     A+ ++A+ +GF     S  + +  T
Sbjct: 175 WLGLDSGIFWPQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCIPTSEGILRAST 234

Query: 348 TCVVQSISIVIIIDSLFAIFYF 369
             VV S   ++ +D +   + F
Sbjct: 235 RTVVSSALTILAVDFILTAWMF 256


>gi|209516602|ref|ZP_03265456.1| protein of unknown function DUF140 [Burkholderia sp. H160]
 gi|209503043|gb|EEA03045.1| protein of unknown function DUF140 [Burkholderia sp. H160]
          Length = 255

 Score =  210 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 59/262 (22%), Positives = 131/262 (50%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +         ++                   + +Q+++VG   + 
Sbjct: 1   MISAIGRAVMSGLGTAGYATRFFLRLLLEFFPLLRRP-------RLVTKQIHFVGNYSLV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D V+++I+PR+WA I+S+P+L  + +   ++G  +V    
Sbjct: 114 AEIGLMKAGEQLTAMEMMAVDPVKVVIAPRLWAGIVSMPILAAIFSAVGVLGGYVVGVLL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+      +  ++  G++K+     A+  VA+ +G+        + +  T 
Sbjct: 174 IGVDAGAFWSQMQGGVDVWKDVGAGVVKSVVFGLAVTFVALFQGYEAKPTPEGVSRATTR 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVYASLAVLGLDFLLTALMFS 255


>gi|189218795|ref|YP_001939436.1| organic solvents resistance ABC-type transport system permease
           component [Methylacidiphilum infernorum V4]
 gi|189185653|gb|ACD82838.1| organic solvents resistance ABC-type transport system permease
           component [Methylacidiphilum infernorum V4]
          Length = 258

 Score =  210 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 67/259 (25%), Positives = 130/259 (50%), Gaps = 7/259 (2%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           + Y +G   +KF+    +   I  L++     F +   +++ FL+    Q+  +G     
Sbjct: 1   MIYRVGSLFIKFLK---ATGEIFFLLLDTLYSFFSFPLRWRLFLM----QILTIGAKSQI 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +V++    TGAV A Q  F   + G    +  ++++  LRE+G +L A+M++GR GSA+ 
Sbjct: 54  IVLVTGAFTGAVFAAQVQFHFGKLGMSSATGPVVTLAMLRELGPVLCALMVSGRVGSAMA 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEI +MK+ E+IDA+R++G+   + LI PR   L++S+PLL  + +   I+   +V    
Sbjct: 114 AEISTMKVTEQIDALRSLGVYVTQYLIVPRFLGLVVSMPLLVAITSGVGILCGYLVSVPL 173

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
             +  A ++       +L +++ G +K  F    I +++   G    + +  +G   T  
Sbjct: 174 LGVEPAYYWENTIRFTSLDDVWMGELKGMFFGGLIVLISCYRGLNCQLSAEGVGIAATQA 233

Query: 350 VVQSISIVIIIDSLFAIFY 368
           +V S   ++I +  F+   
Sbjct: 234 MVYSSIAILISNFFFSFLM 252


>gi|83309431|ref|YP_419695.1| ABC-type transport system [Magnetospirillum magneticum AMB-1]
 gi|82944272|dbj|BAE49136.1| ABC-type transport system [Magnetospirillum magneticum AMB-1]
          Length = 271

 Score =  210 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 75/261 (28%), Positives = 132/261 (50%), Gaps = 2/261 (0%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
              F      +G++ V  I +    A +LG  +   G         +  L  ++ Q   +
Sbjct: 7   PRGFIGFLDRLGRRAVAGIVEFGFGASLLGESLYWLGMGGKRRQPVR--LAPVVAQAMEI 64

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G+  +P+V ++S   G ++A QG + L  FGAE      +++  +RE G L+T +++AGR
Sbjct: 65  GIGALPIVTVLSATIGIMLAIQGIYTLRLFGAESRVSLGVAMSVVREFGPLITGILVAGR 124

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           SGSA+ A +G+M+IN+EIDA+  MG+  VR L+ P + A++  LP LT+ ++   +  A 
Sbjct: 125 SGSALAARLGTMRINQEIDALTVMGVSPVRFLVVPPLLAMMAMLPALTLWSDLVGLFAAG 184

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           + I          +         L +I+ GL K+   +  I +V +  G +V   +  +G
Sbjct: 185 LYIAPQLGSSMGAYVDEMTDLVRLNDIWHGLGKSAIFSVLITVVGVVNGASVTGGAEGVG 244

Query: 344 KKVTTCVVQSISIVIIIDSLF 364
           +  T  VV +IS ++I D +F
Sbjct: 245 RMTTRSVVHAISAIVITDMIF 265


>gi|224588219|gb|ACN58843.1| ABC transporter permease protein [uncultured bacterium BLR12]
          Length = 264

 Score =  210 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 64/248 (25%), Positives = 118/248 (47%), Gaps = 7/248 (2%)

Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171
           YH+ K +  F  +       +        ++    ++       ++RQ Y +G   +P++
Sbjct: 11  YHLSKSVDSFFINVAQTLRFI-------LDYFVQLFRPPYEFSEIVRQCYKIGCDSLPLI 63

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
            L  F+ G V  +Q    LS+FGA  +   L+ I   + +  L+TA++ AG+ GS+I AE
Sbjct: 64  SLTGFIIGVVFTKQSRPSLSEFGATSWLPSLIGIAVFKALAPLVTALICAGKVGSSIGAE 123

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           +G+MK+ E+I+A+        + L+  R+ A +  LP+L +  +  +++G+ + I     
Sbjct: 124 LGAMKVTEQIEAMDVSASKPYKYLVFTRVTACLFMLPILMLFTSLVSLMGSYLDISSNEH 183

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
           I  A F +         ++   LIKA      IG+VA  +GF     +  +GK     VV
Sbjct: 184 ISLATFITNAFDKINFLDLKASLIKALVFGFTIGMVACYKGFNTIRGTEGVGKAANAAVV 243

Query: 352 QSISIVII 359
            S+ ++ I
Sbjct: 244 TSMYLIFI 251


>gi|23016441|ref|ZP_00056197.1| COG0767: ABC-type transport system involved in resistance to
           organic solvents, permease component [Magnetospirillum
           magnetotacticum MS-1]
          Length = 271

 Score =  210 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 72/261 (27%), Positives = 132/261 (50%), Gaps = 2/261 (0%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
              F      +G++    I +    A +LG  +   G         +  L  ++ Q   +
Sbjct: 7   PQGFIGFLDRLGRRAAAAIAEFGFGATLLGESLYWLGMGKKRRQPVR--LAPVVAQAMEI 64

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G+  +P+V ++S   G ++A QG + L  FGAE      +++  +RE G L+T +++AGR
Sbjct: 65  GIGALPIVTVLSATIGIMLAIQGIYTLRLFGAESRVSLGVAMSVVREFGPLITGILVAGR 124

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           SGSA+ A +G+M+IN+EIDA+  MG+  VR L+ P + A+++ LP LT+ ++   +  A 
Sbjct: 125 SGSALAARLGTMRINQEIDALTVMGVSPVRFLVVPPLLAMMVMLPALTLWSDLVGLFAAG 184

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           + I          +         L +++ GL K+   +  I +V +  G +V   +  +G
Sbjct: 185 LYIAPQLGSSMGAYVDEMTDLVRLNDVWHGLGKSAIFSVLITLVGVVNGASVTGGAEGVG 244

Query: 344 KKVTTCVVQSISIVIIIDSLF 364
           +  T  VV +IS +++ D +F
Sbjct: 245 RLTTRSVVHAISAIVVTDMIF 265


>gi|240013249|ref|ZP_04720162.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae DGI18]
 gi|240015696|ref|ZP_04722236.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae FA6140]
 gi|240114786|ref|ZP_04728848.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae PID18]
 gi|240120321|ref|ZP_04733283.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae PID24-1]
 gi|240124812|ref|ZP_04737698.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae SK-92-679]
 gi|254492848|ref|ZP_05106019.1| ABC transporter inner membrane subunit [Neisseria gonorrhoeae 1291]
 gi|260441401|ref|ZP_05795217.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae DGI2]
 gi|268600440|ref|ZP_06134607.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID18]
 gi|268683391|ref|ZP_06150253.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae
           SK-92-679]
 gi|291044759|ref|ZP_06570468.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae DGI2]
 gi|293397855|ref|ZP_06642061.1| ABC transport system permease [Neisseria gonorrhoeae F62]
 gi|226511888|gb|EEH61233.1| ABC transporter inner membrane subunit [Neisseria gonorrhoeae 1291]
 gi|268584571|gb|EEZ49247.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID18]
 gi|268623675|gb|EEZ56075.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae
           SK-92-679]
 gi|291011653|gb|EFE03649.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae DGI2]
 gi|291611801|gb|EFF40870.1| ABC transport system permease [Neisseria gonorrhoeae F62]
 gi|317165512|gb|ADV09053.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 258

 Score =  210 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 130/262 (49%), Gaps = 8/262 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G K +  I    S    L  +++ +G   A            +RQ+Y+ GV  V
Sbjct: 2   NFIRSVGAKTLGLIQPFGSITLFLLNILAKSGTAFARP-------RLSVRQVYFAGVLSV 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            +V +     G V+  QG  QLS+F +      +++   LRE+G +L A++ A  +G A+
Sbjct: 55  LIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAM 114

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            +EIG MK   +++A+  M ++ V  +++PR WA + S+PLL  + N + I GA +V   
Sbjct: 115 TSEIGLMKTTGQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVS 174

Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +   +F+ +  +  T+  ++  GLIK+     A+ ++A+ +GF     S  + +  T
Sbjct: 175 WLGLDSGIFWPQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCIPTSEGILRAST 234

Query: 348 TCVVQSISIVIIIDSLFAIFYF 369
             VV S   ++ +D +   + F
Sbjct: 235 RTVVSSALTILAVDFILTAWMF 256


>gi|326527561|dbj|BAK08055.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 341

 Score =  210 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 61/327 (18%), Positives = 125/327 (38%), Gaps = 6/327 (1%)

Query: 52  TIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLH 111
           T G  L++         +    +      L  L S   R  +            S     
Sbjct: 5   TAGGALLLRPTSATTNPLLRLAIPCPKSHLLRLHSSRRRLPVLRLPLTPHATAGSNSAPS 64

Query: 112 YHIGKKIVKFINDSCS------QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
                          S              +   G+        +    +L+ Q+  VG 
Sbjct: 65  PSPPPPPPTAPPPLFSNWTPPRAIWRGLSALLLAGQVFHRVLTGRVHRRNLLAQLRRVGP 124

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
               V +L +   G     Q   + ++ G       ++++   RE+  ++TAV+ AGR G
Sbjct: 125 GSAGVSLLTAAFVGMAFTIQFVREFTRLGLHRSVGGVLALALARELTPVVTAVVAAGRVG 184

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           SA  AE+G+M+++E+ D +R +G   +  L+ PR+ A +++LP+LT+++    +  ++ +
Sbjct: 185 SAFAAELGTMQVSEQTDTLRVLGSQPIDYLVVPRVLACVLALPVLTLISFALGLASSAFL 244

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
               + +  ++            ++ + LIK+      I +V+   G      +  +G+ 
Sbjct: 245 ADAVFGVSTSIILESARKALRPWDLISALIKSQVFGAIIAVVSCAWGVTTHGGAKGVGES 304

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAIG 372
            T+ VV S+  + I D   +  +F  G
Sbjct: 305 TTSAVVISLVGIFIADFALSCLFFQAG 331


>gi|258592962|emb|CBE69271.1| toluene transporter subunit: membrane component of ABC superfamily
           [NC10 bacterium 'Dutch sediment']
          Length = 256

 Score =  210 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 74/263 (28%), Positives = 133/263 (50%), Gaps = 7/263 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N    +G+ ++K +      A  LG   S          KF+     ++ Q+Y++GV 
Sbjct: 1   MGNPLEAVGRTVLKQVRMMGHMAIFLG---STGLWAVLPPLKFR----RIVSQIYFIGVK 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
              +++L +  +G V+  QG + L +FG+E      + +  +RE+G ++ A+M+A R+GS
Sbjct: 54  SSSIILLTAAFSGMVLGLQGYYTLRKFGSEALLGPAVGLSLIRELGPVMAALMVAARAGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A  AEIG M+I E+IDA+  M ++ V+ L+ P++ A +IS+PLLT + +   I G  +V 
Sbjct: 114 ASAAEIGIMRITEQIDALEAMAVNPVKHLVVPKVVAGLISVPLLTAIFDVVGIFGGYLVG 173

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
            K   +    +FS   +   +++I  G +K+      +  V   +GF  G  +  +GK  
Sbjct: 174 VKMLGVGAGTYFSEMRNMVEMSDIQGGFLKSLSFGLIVTWVCTYKGFYTGYGAEGVGKAT 233

Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369
           T  VV S  +V++ +       F
Sbjct: 234 TEAVVLSSVLVLVWNYFMTAVLF 256


>gi|86606727|ref|YP_475490.1| hypothetical protein CYA_2087 [Synechococcus sp. JA-3-3Ab]
 gi|86555269|gb|ABD00227.1| conserved hypothetical protein [Synechococcus sp. JA-3-3Ab]
          Length = 255

 Score =  210 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 66/239 (27%), Positives = 118/239 (49%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G      G+      + +    + + Q+  VG+  + +V++ + V   V   Q A +  
Sbjct: 7   VGSSFLLAGQVTLHLLRGRIHRRNTLEQLAAVGLESLLIVLITAVVISGVFTIQLAREFI 66

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            FGA      +++I   RE+  ++TAV++AGR GSA  AE+G+MK+ E+IDA+  +  D 
Sbjct: 67  NFGASSLIGGVLAIALARELTPVVTAVILAGRVGSAFAAELGTMKVTEQIDALYLLRTDP 126

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A  + LP+LTIL+  + ++G  I+    Y+IP  VF +   +     ++ 
Sbjct: 127 VDYLVIPRVVAAGLMLPVLTILSLLTGLVGGMIICASVYNIPSTVFLTSAQNLLAPWDLI 186

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
              +KA      I IV    G +    +  +G+  T  VV ++  V + + L +   F 
Sbjct: 187 VCCLKAMVFGSLIAIVGSNWGLSTSGGAKGVGRSTTDAVVTALLGVFVTNFLISWLAFQ 245


>gi|319778667|ref|YP_004129580.1| Uncharacterized ABC transporter, permease component YrbE
           [Taylorella equigenitalis MCE9]
 gi|317108691|gb|ADU91437.1| Uncharacterized ABC transporter, permease component YrbE
           [Taylorella equigenitalis MCE9]
          Length = 258

 Score =  210 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 69/262 (26%), Positives = 127/262 (48%), Gaps = 8/262 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
                IG+ I+  I    + A ++  V  N                 +I Q++++G   +
Sbjct: 3   KFISRIGELIISAICAVGAFARLMWSVFLNVAFIFKRP-------SLVIEQLHFIGNHSL 55

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG   LS +G+E     ++S+   RE+G ++TA++ AGR+G+A 
Sbjct: 56  IIIAVSGLFVGFVLGLQGYHTLSMYGSEESLGLVVSLALTRELGPVVTALLFAGRAGTAT 115

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG MK  E++ A+  MG++ +R ++ PR W   I++P+L  + +   ++G  +V   
Sbjct: 116 TAEIGLMKSGEQLAAMDVMGINPIRRILVPRFWGGTIAMPILATIFSAIGVVGGWVVGVV 175

Query: 289 YYDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
             D+    F+S+  S    + +I  G IK+     A+ ++A+ EG+        + K  T
Sbjct: 176 LIDVDSGSFWSQMQSGTDIVEDILNGFIKSVVFGVAVMLIALFEGWYSVPTPEGVAKATT 235

Query: 348 TCVVQSISIVIIIDSLFAIFYF 369
             VV+S   V+ +D L     F
Sbjct: 236 HTVVKSSLCVLGLDFLLTAVMF 257


>gi|89901707|ref|YP_524178.1| hypothetical protein Rfer_2936 [Rhodoferax ferrireducens T118]
 gi|89346444|gb|ABD70647.1| protein of unknown function DUF140 [Rhodoferax ferrireducens T118]
          Length = 260

 Score =  210 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 58/261 (22%), Positives = 122/261 (46%), Gaps = 8/261 (3%)

Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171
             IG      + +    A +   +++  G         +        Q++++G   + ++
Sbjct: 7   ADIGFAARGQLANLGLGARLFIRLLTTLGPSFKRFGLIR-------DQIHFLGNYSLAII 59

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
            +     G V   QG + L ++G+      L+++  +RE+G ++TA++ AGR+G+++ AE
Sbjct: 60  AVSGLFVGFVFGLQGYYTLQRYGSSSALGLLVTLTLVRELGPVVTALLFAGRAGTSLTAE 119

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           IG MK  E+I  +  M +D V+ +++PR WA +I++PLL  + +   IIG  +V      
Sbjct: 120 IGLMKAGEQISVMEMMAVDPVQRILAPRFWAGVITMPLLAAVFSAMGIIGGWVVGVLMIG 179

Query: 292 IPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
           +    F+S+      +  ++  G++K+      +  +A+ +GF        +    T  V
Sbjct: 180 VDGGSFWSQIQEGVDVWQDLGNGIVKSIVFGFTVTFIALLQGFEAQPTPEGVASATTRTV 239

Query: 351 VQSISIVIIIDSLFAIFYFAI 371
           V +   V+ +D +     F +
Sbjct: 240 VVASLAVLGLDFILTAMMFTV 260


>gi|254368757|ref|ZP_04984770.1| ABC-type transport system permease protein [Francisella tularensis
           subsp. holarctica FSC022]
 gi|157121678|gb|EDO65848.1| ABC-type transport system permease protein [Francisella tularensis
           subsp. holarctica FSC022]
          Length = 254

 Score =  210 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 64/235 (27%), Positives = 121/235 (51%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +  +          K  +   I Q+  VGV+ + +++      G V++ QG + LS+FGA
Sbjct: 18  LVKSLSLILRIVISKLNIRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGA 77

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
                 ++++  LRE+G ++TA++ AGR+ S+I +EIG MK  ++I++++ M ++ +  +
Sbjct: 78  HSLLGVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFI 137

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           +S R WA +IS P+L ++    AI+   I+      I +  F+S   S+ T ++I  G+I
Sbjct: 138 LSTRFWACMISGPILALIFASVAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGII 197

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           K+   A     +A+ +G+     SN + K  T  VV     ++  D +     F 
Sbjct: 198 KSIVFAFITAWIALYQGYYCIPDSNGIAKATTKTVVYCCMSILGADLILTSIMFG 252


>gi|268316272|ref|YP_003289991.1| hypothetical protein Rmar_0705 [Rhodothermus marinus DSM 4252]
 gi|262333806|gb|ACY47603.1| protein of unknown function DUF140 [Rhodothermus marinus DSM 4252]
          Length = 269

 Score =  210 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 62/248 (25%), Positives = 120/248 (48%), Gaps = 3/248 (1%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            +     G ++   G F    ++    +  LI QM   G     +  +     G V+A Q
Sbjct: 20  RAFFEKAGGLVLFMGRFFRDVWRPPYEVRELINQMDEAGSKSFILTAVTGIAIGVVLAMQ 79

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
               L++FGAE    +++++   +EIG ++T++++AGR G+ + AEIGSM++ E+IDA+ 
Sbjct: 80  SRGTLARFGAEAVLPNMLALSVFKEIGPVITSLVLAGRLGAGMAAEIGSMRVTEQIDALE 139

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
              L     L+  R+ A I+  P+LT   N  A+ G  +      D+ + +F++   S+ 
Sbjct: 140 VAALKPFHYLVITRVVACIVMFPVLTTWTNMIALAGGYVESVISADMDYRLFWNSAFSSL 199

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL-- 363
             +++    +K       +GIV+   G+ V   +  +G+     VV S  ++++ D +  
Sbjct: 200 RFSDLIVDTLKTSVFGFLVGIVSCYLGYTVRGGTREVGQAAMQAVVISSLLILLADVVVV 259

Query: 364 -FAIFYFA 370
             ++F F 
Sbjct: 260 RISLFLFG 267


>gi|118496937|ref|YP_897987.1| ABC-type transport system permease protein [Francisella tularensis
           subsp. novicida U112]
 gi|254372307|ref|ZP_04987798.1| hypothetical protein FTCG_01374 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|118422843|gb|ABK89233.1| ABC-type transport system permease protein [Francisella novicida
           U112]
 gi|151570036|gb|EDN35690.1| hypothetical protein FTCG_01374 [Francisella novicida GA99-3549]
 gi|328676409|gb|AEB27279.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Francisella cf. novicida
           Fx1]
          Length = 254

 Score =  210 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 65/235 (27%), Positives = 121/235 (51%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +  +          K  +   I Q+  VGV+ + +++      G V++ QG + LS+FGA
Sbjct: 18  LVKSLSLILRIVISKLNIRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGA 77

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
                 ++++  LRE+G ++TA++ AGR+ S+I +EIG MK  ++I++++ M ++ +  +
Sbjct: 78  HSLLGVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFI 137

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           +S R WA +IS P+L ++    AI+   I+      I +  F+S   S+ T ++I  G+I
Sbjct: 138 LSTRFWACMISGPILALIFASVAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGII 197

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           K+   A     +A+ +G+     SN + K  T  VV     V+  D +     F 
Sbjct: 198 KSIVFAFITAWIALYQGYYCIPDSNGIAKATTKTVVYCCMSVLGADLILTSIMFG 252


>gi|289523217|ref|ZP_06440071.1| STAS domain protein [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289503760|gb|EFD24924.1| STAS domain protein [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 259

 Score =  210 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 76/264 (28%), Positives = 129/264 (48%), Gaps = 8/264 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
                  +GK    F++       +LG + S          + +  L S+  QM  VGV 
Sbjct: 1   MVKWLETLGKATASFLD-------LLGWIASLAFHVLVHLPRARVDLRSVTDQMERVGVQ 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            V +V +IS  TG V+A Q   Q  +FGA  +   ++++  +RE+  +LT +++AGR GS
Sbjct: 54  SVFMVSVISAFTGMVMAVQTLDQFLKFGASGYIGGVIALSMIREMSPVLTGIVVAGRVGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           ++ AEIG+MK+ E++DA+R  GLD    +  PRI A ++ +P+LTI +      G  +  
Sbjct: 114 SMAAEIGTMKVTEQLDALRAFGLDEYVFVGVPRILASLVMVPILTIFSMTVGTFGGYLY- 172

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
             +  I   +F         + +I  GL+K+      I IVA   GF     +  +G+  
Sbjct: 173 VAFRGIHPLIFKDSITLLVNVYDINGGLLKSLVYGFVISIVACACGFRAEGGAKGVGETT 232

Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370
           T  VV S  +++I++ + +   F 
Sbjct: 233 TLAVVWSNMLILILNYMLSTLLFG 256


>gi|313682719|ref|YP_004060457.1| hypothetical protein Sulku_1596 [Sulfuricurvum kujiense DSM 16994]
 gi|313155579|gb|ADR34257.1| protein of unknown function DUF140 [Sulfuricurvum kujiense DSM
           16994]
          Length = 264

 Score =  210 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 68/265 (25%), Positives = 121/265 (45%), Gaps = 4/265 (1%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
            + L  +IG+    F+    +       ++     F      FK +   ++ Q+  +G+ 
Sbjct: 2   VETLLGYIGR---PFVQGFEAIERFGLFILFQLQLFKLYPLTFKRY-KIVLTQIEVIGLG 57

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + V+ L +  TG V A Q      QFGAE F+   +     RE+G +  ++M+  RS S
Sbjct: 58  CMGVITLTALFTGMVEAIQLYNGFHQFGAENFTGYTIFYSISRELGPVFASLMLISRSIS 117

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AE+G+M+++E+IDAI  +G++    LI+PRI A +ISLPLL I  +F A+  A  + 
Sbjct: 118 AMAAELGTMRVSEQIDAIDILGVNSKEYLITPRIIATVISLPLLVIWFDFIAVGSAYFIS 177

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
                I    +           +I TG+IKA      +  +    G+     +  +G+  
Sbjct: 178 IGVLGINPVAYQDTLMRLGEFEDIMTGVIKAAVFGFIVSSIGSYIGYHTSGGARGVGQST 237

Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371
              VV S   + + +   +  +  +
Sbjct: 238 IYAVVYSAVAIFVTNYFLSALFLYL 262


>gi|171915264|ref|ZP_02930734.1| hypothetical protein VspiD_28855 [Verrucomicrobium spinosum DSM
           4136]
          Length = 264

 Score =  210 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 66/254 (25%), Positives = 120/254 (47%), Gaps = 3/254 (1%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                +    +G + +   E   +       +  + +Q+  +G     VVI+    TGAV
Sbjct: 8   GRLFLNFLIYMGQLAALLRELGIAIKSGVWRMRLVAQQIVSIGYGSQVVVIVTGAFTGAV 67

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
              Q  F+   FG E     ++S+   RE+G +L  +M+ GR G+A+ AEIG+MK+ E+I
Sbjct: 68  FTAQTYFKFKDFGVETGVGAIVSVAMCRELGPVLAGLMVTGRVGAAMAAEIGTMKVTEQI 127

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+R +G+  V  L+ PR +A++IS+PLL   +    +  +  V+   + +P A F+   
Sbjct: 128 DALRALGVHPVDYLMLPRFFAMLISMPLLIAESITFGLAASYCVVVFGFGVPSAWFWQHV 187

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                  +I  G+IK       I +++  +G      +  +G   T  VV S   ++I +
Sbjct: 188 VEHTNEEDIIYGMIKGLIFGILITVISCHQGLTASDGAVGVGIGTTRAVVYSSLALLICN 247

Query: 362 SLFAIF---YFAIG 372
              ++    +F +G
Sbjct: 248 FFLSLLLNYFFPLG 261


>gi|148552943|ref|YP_001260525.1| hypothetical protein Swit_0014 [Sphingomonas wittichii RW1]
 gi|148498133|gb|ABQ66387.1| protein of unknown function DUF140 [Sphingomonas wittichii RW1]
          Length = 264

 Score =  210 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 61/251 (24%), Positives = 119/251 (47%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                  +    +G V        + + +   +   L  Q+  +G   +PVV + +  +G
Sbjct: 14  SIGRLFIAALAAIGRVTVFAATTISRAVRPPYYPSRLFEQLMQIGWFSLPVVGMTAIFSG 73

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           A +AQQ     S+F A      ++ +  +RE+G +L  +M+AGR  SA+ AE+G+M++ E
Sbjct: 74  AALAQQTFTAGSRFNATSTVPAIVVLGIVRELGPVLVGLMVAGRVSSAMAAELGTMRVTE 133

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++DA+ T+  D  R LI+PR++A +I++PL+ ++AN   I G   V           +  
Sbjct: 134 QLDALTTLRTDPYRYLIAPRLFAALIAIPLMVLVANAIGIFGGYFVAVYKLGFNAVGYLD 193

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                 T  ++   L+K+ F    I ++    GF     +  +G+  T  VV +  ++++
Sbjct: 194 TTRQFLTATDLQMALVKSAFFGFFIALMGCYHGFRAQGGAAGVGRATTDAVVSAFILILL 253

Query: 360 IDSLFAIFYFA 370
            + +  +  F 
Sbjct: 254 SNMIITLMAFG 264


>gi|226532225|ref|NP_001143055.1| hypothetical protein LOC100275524 [Zea mays]
 gi|194697070|gb|ACF82619.1| unknown [Zea mays]
 gi|195613586|gb|ACG28623.1| hypothetical protein [Zea mays]
          Length = 335

 Score =  210 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 51/236 (21%), Positives = 110/236 (46%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
            +   G+        +    +L+ Q+  VG     V +L +   G     Q   + ++ G
Sbjct: 89  ALLLAGQVFHRVLTGRVHRRNLLAQLRRVGPGSAGVALLTAAFVGMAFTIQFVREFTRLG 148

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
                  ++++   RE+  ++TAV+ AGR GSA  AE+G+M+++E+ D +R +G   V  
Sbjct: 149 LHRSVGGVLALALARELSPVVTAVVAAGRVGSAFAAELGTMQVSEQTDTLRVLGAHPVDY 208

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L+ PR+ A +++LP+LT+++    +  ++ +    + +  ++            ++ + L
Sbjct: 209 LVVPRVLACVLALPVLTLISFALGLASSAFLADSVFGVSVSIILESARRALRPWDLISSL 268

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +K+      I +V+   G      +  +G+  T+ VV S+  + I D   +  +F 
Sbjct: 269 LKSQVFGAIIAVVSCAWGVTTHGGAKGVGESTTSAVVVSLVGIFIADFALSCLFFQ 324


>gi|108761216|ref|YP_628530.1| putative ABC transporter permease [Myxococcus xanthus DK 1622]
 gi|108465096|gb|ABF90281.1| putative ABC transporter, permease protein [Myxococcus xanthus DK
           1622]
          Length = 250

 Score =  210 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 121/249 (48%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           + +  +   LG +   TG+  + + +       L+     +GV  +P+ +L +   G VI
Sbjct: 2   DRAKERLESLGALSRMTGQVFSRAVRPPFDWRGLVYHTESLGVRSLPIALLTAMFAGLVI 61

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           + Q  + LS+FG +     ++ +   RE+  +LTA+ +  R GS I AE+G+M + E++D
Sbjct: 62  SLQFGYFLSRFGVQYTVGRVVILTLFRELAPVLTALTVGARIGSGIAAELGAMTVTEQVD 121

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           AIR +G D +R L+ PR+ A +I LP+LT+ A+   ++  ++V+   Y I   +FF    
Sbjct: 122 AIRALGADPLRKLVVPRVLACLIVLPVLTVFADVVGLVAGALVVNIQYAITLNLFFQGAL 181

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               + +  +G+ K       IG+V    G  V   +  +G+  T  V  +   V + D 
Sbjct: 182 DAVLMPDFASGVFKGAVFGLIIGLVGCFRGLTVEGGTEGVGRATTQTVATTSVSVCLADF 241

Query: 363 LFAIFYFAI 371
                  ++
Sbjct: 242 FITQLTLSL 250


>gi|194324165|ref|ZP_03057939.1| toluene tolerance protein Ttg2B [Francisella tularensis subsp.
           novicida FTE]
 gi|194321612|gb|EDX19096.1| toluene tolerance protein Ttg2B [Francisella tularensis subsp.
           novicida FTE]
          Length = 222

 Score =  210 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 64/218 (29%), Positives = 118/218 (54%)

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           +   I Q+  VGV+ + +++      G V++ QG + LS+FGA      ++++  LRE+G
Sbjct: 3   IRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGAHSLLGVMVALSVLRELG 62

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            ++TA++ AGR+ S+I +EIG MK  ++I++++ M ++ +  ++S R WA +IS P+L +
Sbjct: 63  PVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFILSTRFWACMISGPILAL 122

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           +    AI+   I+      I +  F+S   S+ T ++I  G+IK+   A     +A+ +G
Sbjct: 123 IFASVAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGIIKSIVFAFITAWIALYQG 182

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     SN + K  T  VV     V+  D +     F 
Sbjct: 183 YYCIPDSNGIAKATTKTVVYCCMSVLGADLILTSIMFG 220


>gi|282895910|ref|ZP_06303950.1| Putative uncharacterized protein [Raphidiopsis brookii D9]
 gi|281199155|gb|EFA74024.1| Putative uncharacterized protein [Raphidiopsis brookii D9]
          Length = 238

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 57/227 (25%), Positives = 102/227 (44%)

Query: 144 ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203
               + K    + + Q+  VG   + + +L +   GAV   Q A +   FGA      ++
Sbjct: 3   LHLIRGKIHRRNTVEQLAVVGPDSLFIALLTAIFVGAVFTIQVAREFINFGAGNLVGGVL 62

Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263
           ++   RE+  +LTAV++AGR GSA  AEIG+M++ E+IDA+  +  D +        + L
Sbjct: 63  AVALTRELSPVLTAVILAGRVGSAFAAEIGTMRVTEQIDALLMLKTDPIDFFSHTSSFGL 122

Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323
            I+     +       +G  I+    Y++   VF     +   L +I + +IKA      
Sbjct: 123 FINATNFDLAIPGYWNVGRLIIATNLYNLSDTVFLDSARNFLDLRDIISAMIKAACFGIL 182

Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           I I+    G      +  +G+  TT VV ++ ++ I +   +   F 
Sbjct: 183 IAIIGCSWGLTTTGGAKGVGQSTTTAVVTALLVIFISNFFLSWLMFQ 229


>gi|115378323|ref|ZP_01465489.1| ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1]
 gi|115364677|gb|EAU63746.1| ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1]
          Length = 274

 Score =  210 bits (534), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 66/241 (27%), Positives = 121/241 (50%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
              +  +LG +   TG   + + +      +L+    ++GV  +P+ +L S   G VI+ 
Sbjct: 28  VRQRLEVLGAMAMMTGRVFSRAVRPPYDWGALVYHTEFLGVRSMPIALLTSTFAGLVISL 87

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q  F L++FG +     ++ +   RE+  +LTA+ +  R GS + AE+G+M + E++DAI
Sbjct: 88  QFGFFLARFGVQYTVGRVVVLTLFRELAPVLTALTVGARIGSGMAAELGAMTVTEQVDAI 147

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R +G D +R L+ PR+ A ++ +P LT+LA+   +   ++V+   Y I F +FF      
Sbjct: 148 RALGADPLRKLVVPRVLACLLVMPTLTVLADVIGLGAGALVVNMQYAISFDLFFQGALDA 207

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             + +  +G+IK       IG+V   +G  V   +  +G+  T  V  +   V + D   
Sbjct: 208 VLMTDFVSGVIKGAIFGVIIGLVGCFKGLTVEGGTEGVGRATTQTVAITSVSVCLADFFI 267

Query: 365 A 365
            
Sbjct: 268 T 268


>gi|254373781|ref|ZP_04989264.1| hypothetical protein FTDG_01565 [Francisella novicida GA99-3548]
 gi|151571502|gb|EDN37156.1| hypothetical protein FTDG_01565 [Francisella novicida GA99-3548]
          Length = 254

 Score =  210 bits (534), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 65/235 (27%), Positives = 120/235 (51%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +             K  +   I Q+  VGV+ + +++      G V++ QG + LS+FGA
Sbjct: 18  LVKALSLILRIVISKLNIRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGA 77

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
                 ++++  LRE+G ++TA++ AGR+ S+I +EIG MK  ++I++++ M ++ +  +
Sbjct: 78  HSLLGVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFI 137

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           +S R WA +IS P+L ++    AI+   I+      I +  F+S   S+ T ++I  G+I
Sbjct: 138 LSTRFWACMISGPILALIFASVAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGII 197

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           K+   A     +A+ +G+     SN + K  T  VV     V+  D +     F 
Sbjct: 198 KSIVFAFITAWIALYQGYYCIPDSNGIAKATTKTVVYCCMSVLGADLILTSIMFG 252


>gi|269128543|ref|YP_003301913.1| hypothetical protein Tcur_4348 [Thermomonospora curvata DSM 43183]
 gi|268313501|gb|ACY99875.1| protein of unknown function DUF140 [Thermomonospora curvata DSM
           43183]
          Length = 285

 Score =  210 bits (534), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 59/239 (24%), Positives = 111/239 (46%)

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G   +   +   + +K        I Q +++        +L++   GA+++ Q    + Q
Sbjct: 41  GRFFALCLDAFRAMFKRPLQWREFIEQAWFIVSVTAIPTMLVAIPFGAILSLQVGGLIRQ 100

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
            GA+ F+     +  +RE   L+TA++IAG +GSA+ A+IGS KI EEIDA+  +G++ +
Sbjct: 101 LGAQSFTGATAVVAIVREASPLVTALLIAGAAGSAMCADIGSRKIREEIDAMEVLGINPL 160

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
             L+ PR+WA       L  L +   ++G         D     + + F++ A L ++  
Sbjct: 161 HRLVVPRMWACAFIGLFLNGLVSVVGLVGGYFFNVVLQDGTPGAYLASFNAMAQLPDLIQ 220

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
             +KA       G+VA  +G         +G  V   VV +  ++ + + + +  YF +
Sbjct: 221 AEVKAFIFGLTAGLVAAYKGLNAKGGPKGVGDAVNQTVVITFMLLFVENFVISALYFQL 279


>gi|208780390|ref|ZP_03247731.1| toluene tolerance protein Ttg2B [Francisella novicida FTG]
 gi|208743758|gb|EDZ90061.1| toluene tolerance protein Ttg2B [Francisella novicida FTG]
          Length = 241

 Score =  210 bits (534), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 65/235 (27%), Positives = 120/235 (51%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +             K  +   I Q+  VGV+ + +++      G V++ QG + LS+FGA
Sbjct: 5   LVKALSLILRIVISKLNIRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGA 64

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
                 ++++  LRE+G ++TA++ AGR+ S+I +EIG MK  ++I++++ M ++ +  +
Sbjct: 65  HSLLGVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFI 124

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           +S R WA +IS P+L ++    AI+   I+      I +  F+S   S+ T ++I  G+I
Sbjct: 125 LSTRFWACMISGPILALIFASVAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGII 184

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           K+   A     +A+ +G+     SN + K  T  VV     V+  D +     F 
Sbjct: 185 KSIVFAFITAWIALYQGYYCIPDSNGIAKATTKTVVYCCMSVLGADLILTSIMFG 239


>gi|242073950|ref|XP_002446911.1| hypothetical protein SORBIDRAFT_06g024700 [Sorghum bicolor]
 gi|241938094|gb|EES11239.1| hypothetical protein SORBIDRAFT_06g024700 [Sorghum bicolor]
          Length = 338

 Score =  210 bits (534), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 110/236 (46%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
            +   G+        +    +L+ Q+  VG     V +L +   G     Q   + ++ G
Sbjct: 92  ALLLAGQVFHRVLTGRVHRRNLLAQLRRVGPGSAGVALLTAAFVGMAFTIQFVREFTRLG 151

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
                  ++++   RE+  ++TAV+ AGR GSA  AE+G+M+++E+ D +R +G   V  
Sbjct: 152 LHRSVGGVLALALARELSPVVTAVVAAGRVGSAFAAELGTMQVSEQTDTLRVLGAHPVDY 211

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L+ PR+ A +++LP+LT+++    +  ++ +    + +  ++            ++ + L
Sbjct: 212 LVVPRVLACVLALPVLTLISFALGLASSAFLADSVFGVSVSIILESARRALRPWDLISSL 271

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +K+      I +V+   G      +  +G+  T+ VV S+  + + D   +  +F 
Sbjct: 272 LKSQVFGAIIAVVSCAWGVTTHGGAKGVGESTTSAVVVSLVGIFVADFALSCLFFQ 327


>gi|328675485|gb|AEB28160.1| ABC-type transport system permease protein [Francisella cf.
           novicida 3523]
          Length = 222

 Score =  210 bits (534), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 64/218 (29%), Positives = 118/218 (54%)

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           +   I Q+  VGV+ + +++      G V++ QG + LS+FGA      ++++  LRE+G
Sbjct: 3   IRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGAHSLLGVMVALSVLRELG 62

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            ++TA++ AGR+ S+I +EIG MK  ++I++++ M ++ +  ++S R WA +IS P+L +
Sbjct: 63  PVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFILSTRFWACMISGPILAL 122

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           +    AI+   I+      I +  F+S   S+ T ++I  G+IK+   A     +A+ +G
Sbjct: 123 IFASVAILAGFILAEATLGISYGEFWSNIQSSVTASDISNGIIKSIVFAFITAWIALYQG 182

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +     SN + K  T  VV     V+  D +     F 
Sbjct: 183 YYCIPDSNGIAKATTKTVVYCCMSVLGADLILTSIMFG 220


>gi|116071211|ref|ZP_01468480.1| hypothetical protein BL107_16235 [Synechococcus sp. BL107]
 gi|116066616|gb|EAU72373.1| hypothetical protein BL107_16235 [Synechococcus sp. BL107]
          Length = 249

 Score =  210 bits (534), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 64/239 (26%), Positives = 114/239 (47%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  +   G+   ++ + +   + L  Q+   G   + +V++IS   G+V   Q A +L+
Sbjct: 10  LGASLLIGGQAVTATMRGRINTVELSDQLMEAGPGSLLIVLIISVAAGSVFNIQVAAELT 69

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + GA      ++++   REI  LLTA ++AG+  +A  A++G+MK+ E+IDAI  +  D 
Sbjct: 70  RQGAGSTVGGILALGLAREIAPLLTACLLAGKVATAYAAQLGTMKVTEQIDAITMLRTDP 129

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ AL++  PL        A+    I     Y+IP +VF++   +     ++ 
Sbjct: 130 VEYLVVPRLIALVVMAPLQCFFFFIVAVWSGQITSTALYNIPPSVFWTSVRTWMHPEDLP 189

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             L+KA      I  ++   G         +G   T  VV  + +V I+D +     F 
Sbjct: 190 FMLVKAVVFGLIIATISCGWGLTTRGGPKEVGTSTTGAVVMILILVCIMDVVLTQVLFG 248


>gi|296117337|ref|ZP_06835927.1| hypothetical protein GXY_16012 [Gluconacetobacter hansenii ATCC
           23769]
 gi|295976103|gb|EFG82891.1| hypothetical protein GXY_16012 [Gluconacetobacter hansenii ATCC
           23769]
          Length = 433

 Score =  210 bits (534), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 82/375 (21%), Positives = 153/375 (40%), Gaps = 14/375 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +E   T+   +G W   +     D     +  + +          +   DT     +   
Sbjct: 70  AEANRTLITLSGEW-IAQTGTTPDFPNNGLAPATKGKPLEFSTDGLGRWDTSLISFLWEL 128

Query: 62  MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
                     +  + +     +L  L+                            +G+  
Sbjct: 129 KRDARQADLSVSAETLPDSARKLLDLLPEIPPDAH--------APPPHHFAPVTAVGQFT 180

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +  +N+    + +   V +  G   A   K     + L+  +   G + + +V +++F+ 
Sbjct: 181 LDTLNEIGCVSEM--GVATAKGGLAALLGKGMMRTIDLMSDVRAAGPTALVIVGVVNFLV 238

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA++A  GA QL +F A+I+   L+ I  +RE+  ++TA+++AGR+G A  A I +M+ N
Sbjct: 239 GAILAFVGAVQLHKFAADIYVASLVGIAMVREMSAVMTAIIMAGRTGGAYAARISTMQGN 298

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+   G+     LI P + ALI+++PLL +      + G   V +   ++    +F
Sbjct: 299 EEIDALTVFGIPVASYLILPSVLALILTMPLLYLYGCLIGMFGGFFVSYIMLNVTPLGYF 358

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
                   L+    G IK+      IG+ + + G   G  +  +G   T  VV  I  VI
Sbjct: 359 HETLYAVALSQFVFGFIKSIVFGGFIGLTSCRIGLKAGRSAADVGIAATRAVVVGIVGVI 418

Query: 359 IIDSLFAIFYFAIGI 373
            ID++FA+    + I
Sbjct: 419 AIDAIFAVIANVLDI 433


>gi|121603597|ref|YP_980926.1| hypothetical protein Pnap_0686 [Polaromonas naphthalenivorans CJ2]
 gi|120592566|gb|ABM36005.1| protein of unknown function DUF140 [Polaromonas naphthalenivorans
           CJ2]
          Length = 260

 Score =  210 bits (534), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 54/259 (20%), Positives = 120/259 (46%), Gaps = 8/259 (3%)

Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171
             +G     ++ +      +   +++  G         +        Q++++G   + ++
Sbjct: 7   ADVGFATRSWLANLGYGCRLFLRLLATFGSSFKRFGLVR-------DQIHFLGNYSLVII 59

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
            +     G V   QG + L +FG+      L++   +RE+G ++TA++ AGR+G+++ AE
Sbjct: 60  AISGLFVGFVFGLQGYYTLLRFGSTEALGQLVTFTLVRELGPVVTALLFAGRAGTSLTAE 119

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           IG MK  E+I  +  M +D ++ +++PR W  +I++PLL  + +   +IG  +V      
Sbjct: 120 IGLMKAGEQISVMEMMAVDPIQRILAPRFWGGVITMPLLAAVFSAMGVIGGWVVGVLMLG 179

Query: 292 IPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
           +    F+S+   +  +  ++  G++K+      +  +A+ +GF        +    T  V
Sbjct: 180 VDSGSFWSQIQGSVDVWRDVGNGIVKSIVFGFTVTFIALLQGFEAQPTPEGVASATTRTV 239

Query: 351 VQSISIVIIIDSLFAIFYF 369
           V +   V+ +D +     F
Sbjct: 240 VVASLAVLALDFILTAMMF 258


>gi|89255923|ref|YP_513285.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica LVS]
 gi|115314405|ref|YP_763128.1| toluene ABC transporter ATP-binding/membrane protein [Francisella
           tularensis subsp. holarctica OSU18]
 gi|167009174|ref|ZP_02274105.1| toluene ABC superfamily ATP binding cassette transporter, membrane
           protein [Francisella tularensis subsp. holarctica
           FSC200]
 gi|169656537|ref|YP_001427977.2| toluene tolerance protein [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|254367281|ref|ZP_04983308.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica 257]
 gi|290953704|ref|ZP_06558325.1| putative ABC transport system permease protein [Francisella
           tularensis subsp. holarctica URFT1]
 gi|295312939|ref|ZP_06803658.1| putative ABC transport system permease protein [Francisella
           tularensis subsp. holarctica URFT1]
 gi|89143754|emb|CAJ78956.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica LVS]
 gi|115129304|gb|ABI82491.1| toluene ABC superfamily ATP binding cassette transporter, membrane
           protein [Francisella tularensis subsp. holarctica OSU18]
 gi|134253098|gb|EBA52192.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica 257]
 gi|164551605|gb|ABU61021.2| toluene tolerance protein [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 254

 Score =  210 bits (534), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 64/235 (27%), Positives = 122/235 (51%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +  +          K  +   I Q+  VGV+ + +++      G V++ QG + LS+FGA
Sbjct: 18  LVKSLSLILRIVISKLNIRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGA 77

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
                 ++++  LRE+G ++TA++ AGR+ S+I +EIG MK  ++I++++ M ++ +  +
Sbjct: 78  HSLLGVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFI 137

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           +S R WA +IS P+L ++    AI+ + I+      I +  F+S   S+ T ++I  G+I
Sbjct: 138 LSTRFWACMISGPILALIFASVAILASFILAEAALGISYGEFWSNIQSSVTASDISNGII 197

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           K+   A     +A+ +G+     SN + K  T  VV     ++  D +     F 
Sbjct: 198 KSIVFAFITAWIALYQGYYCIPDSNGIAKATTKTVVYCCMSILGADLILTSIMFG 252


>gi|332041054|gb|EGI77422.1| hypothetical protein HGR_06456 [Hylemonella gracilis ATCC 19624]
          Length = 260

 Score =  210 bits (534), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 56/241 (23%), Positives = 121/241 (50%), Gaps = 1/241 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G        F   +         +  Q++ +G   + ++++     G V+  QG + L 
Sbjct: 20  IGRATRLFIRFWQLARPTFRRFGLVSEQIHLLGNHSLAIIVVSGLFVGFVLGLQGYYILV 79

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            FG+E     ++++  +RE+G ++ A++ AGR+G+++ AEIG +K  E+++A+  M +D 
Sbjct: 80  DFGSEQALGQMVTLSLVRELGPVVAALLFAGRAGTSLTAEIGLLKAGEQLNAMAMMAVDP 139

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NI 310
           V+ +++PR WA +I+LPLLT + +   ++G  +V      I    F+ +  ++ ++  ++
Sbjct: 140 VQRILAPRFWAGVIALPLLTAVFSAVGVLGGWVVGVVMIGIDPGAFWGQMQASVSVWSDV 199

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             G+IK+      +   A+ +G+        + +  T  VV +   V+ +D +     F 
Sbjct: 200 GNGVIKSIVFGFTVSFTALLQGYEAQPTPEGVSRATTRTVVMASLAVLGLDFVLTALMFT 259

Query: 371 I 371
           I
Sbjct: 260 I 260


>gi|300871878|ref|YP_003786751.1| ABC transporter permease-like protein [Brachyspira pilosicoli
           95/1000]
 gi|300689579|gb|ADK32250.1| ABC-type transport system permease protein-like protein
           [Brachyspira pilosicoli 95/1000]
          Length = 268

 Score =  209 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 66/253 (26%), Positives = 122/253 (48%), Gaps = 2/253 (0%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N        LG   S   +    +++       L  Q+  +GV    V  +    TG V+
Sbjct: 16  NKIIILLDTLGEFASLLIQIFKYTFRPSFSFKLLTDQIVRMGVESFIVAAVTVLCTGMVM 75

Query: 183 AQQGAFQLSQF--GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           + Q A  L     G   F   ++    ++E+  +L A++ AGR GS++ AEIG+M+++E+
Sbjct: 76  SLQIAVVLDSVLKGISQFVGSMVGKAMVKELSPMLLALIFAGRVGSSVTAEIGTMQVSEQ 135

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +DA++T+  + +  +  PR WA +ISLP+LT+ A+   ++G ++V     +   A++F R
Sbjct: 136 LDALKTLYTNPIEYVAVPRFWAAVISLPMLTVSADIIGVLGGAVVTVFVLNNDPAIYFDR 195

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             +  +L +    LIK+      + +++   GF     +  +GK  T  VV S  +++I 
Sbjct: 196 AIAVISLGDFIGSLIKSTIFGAEVILISCFYGFRTNGGAEGVGKATTISVVYSFMLILIT 255

Query: 361 DSLFAIFYFAIGI 373
           D L        G+
Sbjct: 256 DYLLVSILGMFGM 268


>gi|78184152|ref|YP_376587.1| hypothetical protein Syncc9902_0575 [Synechococcus sp. CC9902]
 gi|78168446|gb|ABB25543.1| Protein of unknown function DUF140 [Synechococcus sp. CC9902]
          Length = 249

 Score =  209 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 65/239 (27%), Positives = 113/239 (47%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  +   G+   ++ + +   + L  Q+   G   + +V +IS   G+V   Q A +L+
Sbjct: 10  LGSSLLIGGQAVTATMRGRINTVDLSDQLMEAGPGSLLIVFIISVAAGSVFNIQVAAELT 69

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + GA      +++I   REI  LLTA ++AG+  +A  A++G+MK+ E+IDAI  +  D 
Sbjct: 70  RQGAGSTVGGILAIGLAREIAPLLTACLLAGKVATAYAAQLGTMKVTEQIDAITMLRTDP 129

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ AL++  PL        A+    I     Y+IP +VF++   +     ++ 
Sbjct: 130 VEYLVVPRLIALVVMAPLQCFFFFIVAVWSGQITSTALYNIPPSVFWTSVRTWMHPEDLP 189

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             L+KA      I  ++   G         +G   T  VV  + +V I+D +     F 
Sbjct: 190 FMLVKAVVFGLIIATISCGWGLTTKGGPKEVGTSTTGAVVMILILVCIMDVVLTQVLFG 248


>gi|323343316|ref|ZP_08083543.1| ABC superfamily ATP binding cassette transporter permease protein
           [Prevotella oralis ATCC 33269]
 gi|323095135|gb|EFZ37709.1| ABC superfamily ATP binding cassette transporter permease protein
           [Prevotella oralis ATCC 33269]
          Length = 260

 Score =  209 bits (533), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 57/241 (23%), Positives = 109/241 (45%), Gaps = 1/241 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
               G  +   G   +   + + F    +++M  +G+  + +V+LISF  GAVI  Q   
Sbjct: 19  LTTFGRYLILMGRSFSRPERMRMFFKQYVKEMSQLGIDSIGIVLLISFFIGAVICIQMKL 78

Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +       +        + L E    +  +++AG+ GS I +E+G+M++ ++IDA+  M
Sbjct: 79  NIQSPWMPRWVSGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALDIM 138

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    LI P+I  L+  +P L I ++ + I+GA    +  + +           +   
Sbjct: 139 GVNSASYLILPKIMGLVTIMPFLVIFSSLTGILGAYGTAYIGHILTPEDLTLGLQHSFNP 198

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             ++  +IK+ F A  I  V+   G++V   S  +GK  T  VV S  +++  D      
Sbjct: 199 WFVWMSIIKSLFFAFIIASVSSYFGYSVEGGSVEVGKASTDAVVSSSVLILFSDVFLTQL 258

Query: 368 Y 368
            
Sbjct: 259 L 259


>gi|116331506|ref|YP_801224.1| membrane protein of an ABC transporter complex [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
 gi|116125195|gb|ABJ76466.1| Membrane protein of an ABC transporter complex [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
          Length = 259

 Score =  209 bits (533), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 68/241 (28%), Positives = 112/241 (46%), Gaps = 4/241 (1%)

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G  I    E   +          ++ QMY  GV  + VV +++  TG +++      L  
Sbjct: 17  GFTILLVYESILNLPHGFFKRKEILDQMYITGVGSISVVSIVAIFTGMIMSLNTGLGLKD 76

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
           FGAE     LM+I   RE+   +TA+++A   GSA+ AEIG+MKI+EEIDA+  M +D V
Sbjct: 77  FGAEGQIGLLMTITLTREMSPFMTALILAASIGSAMAAEIGTMKISEEIDALEVMSIDPV 136

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA----TLA 308
           R LI PRI    I +P+L + +    I+G +IV +    I +  +F            L 
Sbjct: 137 RYLIFPRILGFSIMVPVLCVYSTILGILGGAIVGYFQLGIDYFTYFRDVFDRVASIPGLK 196

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +++ G++K       +  ++   G      +  +G+     VV S  +VI    +     
Sbjct: 197 DLYVGILKGFIFGVIVSAISCSHGLRTSGGAIGVGRATRESVVTSFLMVIFTGYMITALL 256

Query: 369 F 369
           +
Sbjct: 257 Y 257


>gi|238758308|ref|ZP_04619486.1| hypothetical protein yaldo0001_1950 [Yersinia aldovae ATCC 35236]
 gi|238703431|gb|EEP95970.1| hypothetical protein yaldo0001_1950 [Yersinia aldovae ATCC 35236]
          Length = 208

 Score =  209 bits (533), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 62/206 (30%), Positives = 107/206 (51%), Gaps = 1/206 (0%)

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             + ++++     G V+  QG   L+ + AE     ++S+  LRE+G ++TA++ AGR+G
Sbjct: 2   QSLLIIVVSGLFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAG 61

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           SA+ AEIG MK  E+I ++  M +D +R +++PR WA +IS+PLLT +     I G S+V
Sbjct: 62  SALTAEIGLMKATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVV 121

Query: 286 IWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
              +  I    F+S   +      ++   LIK+   A  +  +A+  G+     S  + +
Sbjct: 122 GVDWKGIDAGFFWSAMQNAVEWRTDLLNCLIKSLVFAITVTWIALFNGYDAIPTSEGISR 181

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370
             T  VV S   V+ +D +     F 
Sbjct: 182 ATTRTVVHSSLAVLGLDFVLTALMFG 207


>gi|288801493|ref|ZP_06406945.1| ABC transporter, permease [Prevotella sp. oral taxon 299 str.
           F0039]
 gi|288331574|gb|EFC70060.1| ABC transporter, permease [Prevotella sp. oral taxon 299 str.
           F0039]
          Length = 248

 Score =  209 bits (533), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 59/241 (24%), Positives = 109/241 (45%), Gaps = 1/241 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG  I   G   +   + + F    I++M  +GV  + +V+LISF  GAVI  Q   
Sbjct: 7   LTSLGEYIMLMGRSFSRPERMRMFFKRYIKEMSSLGVDSIGIVLLISFFIGAVICIQMKL 66

Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +       +        + + E    +  ++++G+ GS I +E+G+M++ ++IDA+  M
Sbjct: 67  NIQSPWMPRWVSGYTTREILILEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALDIM 126

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    LI P+I  L+  +P L I ++ + I+GA    +  + +           +   
Sbjct: 127 GINSASYLIMPKILGLVTIMPFLVIFSSVTGILGAYATAYIGHILSPEDLTLGLQHSFNP 186

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             ++  +IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D      
Sbjct: 187 WFVWMSIIKSLFFAFIIASVSSYYGYTVQGGSVEVGKSSTDAVVSSSILILFSDVFLTQI 246

Query: 368 Y 368
            
Sbjct: 247 L 247


>gi|300777429|ref|ZP_07087287.1| ABC superfamily ATP binding cassette transporter permease protein
           [Chryseobacterium gleum ATCC 35910]
 gi|300502939|gb|EFK34079.1| ABC superfamily ATP binding cassette transporter permease protein
           [Chryseobacterium gleum ATCC 35910]
          Length = 253

 Score =  209 bits (533), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 61/239 (25%), Positives = 118/239 (49%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             S     G +   T  +    ++    +  L+ Q Y +G   + ++ +  F+ G V+  
Sbjct: 4   IRSFLQETGNIAQFTKNYFLLGFRPPYEIKELLAQCYLIGYKSLGLISMTGFIIGLVLTM 63

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q    L ++G E     ++ I  +REI  ++ A++ AG+  S+I AE+GSM++ E+IDA+
Sbjct: 64  QLRPSLVRYGVESQLPVMVGIAIIREIAPVIAALIFAGKIASSIGAELGSMRVTEQIDAM 123

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
              G    + L++ R+ A    LP+L ILA+  ++ GA I +        ++F+S+   +
Sbjct: 124 EVSGTHPFKYLVATRVLATTFMLPVLIILADAISLYGAWIGVNIGGTTSLSLFYSQVFDS 183

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              ++I    IK+ F   A+GIV   +G+     +  +G    + VV S  ++ ++D +
Sbjct: 184 LDFSDIIPAFIKSFFFGFAVGIVGAYKGYNAVKGTRGVGNAANSAVVLSSILIFVLDLI 242


>gi|125549278|gb|EAY95100.1| hypothetical protein OsI_16916 [Oryza sativa Indica Group]
          Length = 345

 Score =  209 bits (533), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 110/236 (46%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
            +   G+        +    +L+ Q+  VG     V +L +   G     Q   + ++ G
Sbjct: 99  ALLLAGQVFHRVLTGRVHRRNLLAQLRRVGPGSAGVSLLTAAFVGMAFTIQFVREFTRLG 158

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
                  ++++   RE+  ++TAV+ AGR GSA  AE+G+M+++E+ D +R +G   V  
Sbjct: 159 LHRSVGGVLALALSRELSPVVTAVVAAGRVGSAFAAELGTMQVSEQTDTLRVLGAQPVDY 218

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L+ PR+ A +++LP+LT+++    +  ++ +    + +  ++            ++ + L
Sbjct: 219 LVVPRVVACVLALPVLTLMSFALGLASSAFLADSIFGVSTSIILESARRALRPWDLISSL 278

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +K+      I +V+   G      +  +G+  T+ VV S+  + + D   +  +F 
Sbjct: 279 LKSQVFGAIIAVVSCAWGVTTHGGAKGVGESTTSAVVVSLVGIFVADFALSCLFFQ 334


>gi|116328041|ref|YP_797761.1| membrane protein of an ABC transporter complex [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116120785|gb|ABJ78828.1| Membrane protein of an ABC transporter complex [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
          Length = 259

 Score =  209 bits (532), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 68/241 (28%), Positives = 112/241 (46%), Gaps = 4/241 (1%)

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G  I    E   +          ++ QMY  GV  + VV +++  TG +++      L  
Sbjct: 17  GFTILLVYESILNLPHGFFKRKEILDQMYITGVGSIFVVSIVAIFTGMIMSLNTGLGLKD 76

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
           FGAE     LM+I   RE+   +TA+++A   GSA+ AEIG+MKI+EEIDA+  M +D V
Sbjct: 77  FGAEGQIGLLMTITLTREMSPFMTALILAASIGSAMAAEIGTMKISEEIDALEVMSIDPV 136

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA----TLA 308
           R LI PRI    I +P+L + +    I+G +IV +    I +  +F            L 
Sbjct: 137 RYLIFPRILGFSIMVPVLCVYSTILGILGGAIVGYFQLGIDYFTYFRDVFDRVASIPGLK 196

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +++ G++K       +  ++   G      +  +G+     VV S  +VI    +     
Sbjct: 197 DLYVGILKGFIFGVIVSAISCSHGLRTSGGAIGVGRATRESVVTSFLMVIFTGYMITALL 256

Query: 369 F 369
           +
Sbjct: 257 Y 257


>gi|163739574|ref|ZP_02146983.1| hypothetical protein RGBS107_12532 [Phaeobacter gallaeciensis
           BS107]
 gi|163741440|ref|ZP_02148831.1| membrane protein [Phaeobacter gallaeciensis 2.10]
 gi|161385174|gb|EDQ09552.1| membrane protein [Phaeobacter gallaeciensis 2.10]
 gi|161387033|gb|EDQ11393.1| hypothetical protein RGBS107_12532 [Phaeobacter gallaeciensis
           BS107]
          Length = 266

 Score =  209 bits (532), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 58/254 (22%), Positives = 116/254 (45%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           + +      +    +G V        +   +   +   L+  +  VG   +PVV L +  
Sbjct: 13  LARLGQMVLAGLGAVGRVTLFGLSTFSHMLRPPYYPRELLNALLQVGWLSLPVVGLTAIF 72

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TGA +A Q     ++F AE     +++I  +RE+G +L  +MIA R  S+I AEI +MK+
Sbjct: 73  TGAALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKV 132

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+ T+    ++ L++PR+ A +I++P+L  + +   I+G  +V  +      A +
Sbjct: 133 TEQIDALVTLSTHPMKYLVAPRVLAALITVPVLVGVGDIIGIMGGYVVATQNLGFNPAAY 192

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                    L +I + L+K          +    G   G  +  +G+     V  +  ++
Sbjct: 193 LKNTVDFLELRDIVSSLVKGAAFGTIAATMGCYYGMQSGRGAQGVGRATKGSVEAAAVLI 252

Query: 358 IIIDSLFAIFYFAI 371
           +  + +    +F++
Sbjct: 253 LAANFVLTGIFFSL 266


>gi|223937293|ref|ZP_03629199.1| protein of unknown function DUF140 [bacterium Ellin514]
 gi|223894078|gb|EEF60533.1| protein of unknown function DUF140 [bacterium Ellin514]
          Length = 244

 Score =  209 bits (532), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 66/244 (27%), Positives = 116/244 (47%), Gaps = 2/244 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +G ++        S             Q + +G + + +V ++SF  G VIA    
Sbjct: 1   MFQNIGELMLLFWRTVRSLPLVWRQRQKTFDQFFEIGNASLLMVCILSFFIGGVIALLTG 60

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L + G       L+ I   +E+  ++ +++IAGR GS++ AEIGSM++ +EIDA+RTM
Sbjct: 61  PVLVERGLTNSVGGLVGISMAKELAPVMMSILIAGRIGSSMTAEIGSMRVYQEIDALRTM 120

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI--PFAVFFSRFHSTA 305
            ++ +  L+ PR+ A+ ++LPLL I +      G ++V    + I   F  FF+      
Sbjct: 121 NINPIHYLVLPRLTAIAVALPLLVIFSILVGWGGGALVSALNHKIAVSFQAFFTNLREVV 180

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
              ++  GL+K+   A  IG+V   +G         +G+ VT  VV  I +++I+D    
Sbjct: 181 DFGDVINGLVKSFIFALVIGVVCCHQGLQTIGGPRGIGRSVTKAVVNCIVLIVILDYFLT 240

Query: 366 IFYF 369
               
Sbjct: 241 RLML 244


>gi|56708629|ref|YP_170525.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110671100|ref|YP_667657.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis FSC198]
 gi|134301425|ref|YP_001121393.1| ABC-type transporter involved in resistance to organic solvents,
           permease protein [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|224457822|ref|ZP_03666295.1| ABC-type transporter involved in resistance to organic solvents,
           permease protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254371262|ref|ZP_04987264.1| toluene ABC superfamily ATP binding cassette transporter
           [Francisella tularensis subsp. tularensis FSC033]
 gi|254875493|ref|ZP_05248203.1| toluene ABC superfamily ATP binding cassette transporter
           [Francisella tularensis subsp. tularensis MA00-2987]
 gi|56605121|emb|CAG46242.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110321433|emb|CAL09625.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis FSC198]
 gi|134049202|gb|ABO46273.1| ABC-type transporter involved in resistance to organic solvents,
           permease protein [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|151569502|gb|EDN35156.1| toluene ABC superfamily ATP binding cassette transporter
           [Francisella tularensis subsp. tularensis FSC033]
 gi|254841492|gb|EET19928.1| toluene ABC superfamily ATP binding cassette transporter
           [Francisella tularensis subsp. tularensis MA00-2987]
 gi|282159866|gb|ADA79257.1| ABC-type transporter involved in resistance to organic solvents,
           permease protein [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 254

 Score =  208 bits (531), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 64/235 (27%), Positives = 120/235 (51%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +  +          K  +   I Q+  VGV+ + +++      G V++ QG + LS+FGA
Sbjct: 18  LVKSLSLILRIVISKLNIRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGA 77

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
                 ++++  LRE+G ++TA++ AGR+ S+I +EIG MK  ++I++++ M ++ +  +
Sbjct: 78  HSLLGVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFI 137

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           +S R WA +IS P+L ++    AI+   I+      I +  F+S   S+   ++I  G+I
Sbjct: 138 LSTRFWACMISGPILALIFASVAILAGFILAEAALGISYGEFWSNIQSSVIASDISNGII 197

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           K+   A     +A+ +G+     SN + K  T  VV     V+  D +     F 
Sbjct: 198 KSIVFAFITAWIALYQGYYCIPDSNGIAKATTKTVVYCCMSVLGADLILTSIMFG 252


>gi|167835250|ref|ZP_02462133.1| ABC transporter, permease protein [Burkholderia thailandensis
           MSMB43]
          Length = 281

 Score =  208 bits (531), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 85/286 (29%), Positives = 144/286 (50%), Gaps = 6/286 (2%)

Query: 88  THRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSY 147
             R     + P+     +         G+ +  F         +LG +I +         
Sbjct: 1   IERLDAGREAPEPVVRIDPVTRF----GQGLFTFGEHLYGGIALLGGLIVDLLSVLRRPR 56

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
                   +   +Y  G   +P+  L++F+ G V++   A QL  FGA  + ++++ +  
Sbjct: 57  TMP--WTEISANVYAAGAKALPITALVAFLIGIVLSYLSAQQLQLFGANRYIVNILGLSV 114

Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267
           +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R MG+     +  PR+ AL +++
Sbjct: 115 IRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVMGIPHGLRITLPRVLALGVAM 174

Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327
           PLL +  N  A+ G ++       I    F     S   +AN+F GL K       I +V
Sbjct: 175 PLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSLPSVVPIANLFIGLGKGVVFGMLIALV 234

Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           A   GF +  +S SLG+  TT VV SI++VI+ D++FAI +  +G+
Sbjct: 235 ACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAILFQNVGL 280


>gi|87120456|ref|ZP_01076350.1| hypothetical protein MED121_21902 [Marinomonas sp. MED121]
 gi|86164099|gb|EAQ65370.1| hypothetical protein MED121_21902 [Marinomonas sp. MED121]
          Length = 260

 Score =  208 bits (531), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 68/248 (27%), Positives = 123/248 (49%), Gaps = 2/248 (0%)

Query: 125 SCSQAHILGLV-ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
           + +     G   +              G +  L++Q+Y VGV  + ++++     G V+ 
Sbjct: 11  ALNTIGAFGQAGLFLIQVMLHRPKSLSGAMGLLMKQIYSVGVLSLVIILVSGLFIGMVLG 70

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
            QG   L++FG+E     L+++  LRE+G ++TA++ AGR+ SA+ AEIG MK  E++ +
Sbjct: 71  LQGYTILAKFGSEQAVGQLLALTLLRELGPVVTALLFAGRACSALTAEIGLMKATEQLSS 130

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG+D  R +I+PR  A +I LP+L ++ +   I+G   V   +  I    F+S    
Sbjct: 131 LEMMGVDPYRRIIAPRFIAGLICLPILCVIFSAVGILGGEFVAVTWLQIHGGSFWSLMQQ 190

Query: 304 TATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           +   + ++  G+IKA   A A   +A+ +G+     S  +GK  T  VV     ++ +D 
Sbjct: 191 SVYFSTDVVNGIIKAFCFAIATTWIAVFQGYQCEPTSEGIGKATTRTVVLGSLSILALDF 250

Query: 363 LFAIFYFA 370
           +       
Sbjct: 251 ILTAAMIG 258


>gi|255070247|ref|XP_002507205.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
 gi|226522480|gb|ACO68463.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
          Length = 297

 Score =  208 bits (531), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 109/224 (48%)

Query: 147 YKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206
           +  K  +   ++Q+  VG   + V +L S   G V   Q   + S+ G       L+ + 
Sbjct: 73  WHRKLNMQQTLQQISRVGPDTLGVSMLTSSFVGMVFTIQFCKEFSKVGLTRVIGGLLGLA 132

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
             RE+  ++ A+++AGR GSA+ AE+G+M+++E++D +RT+G D V  L++PR+ A  +S
Sbjct: 133 FTRELTPVICAIVLAGRVGSAVAAELGTMQVSEQVDQLRTLGSDPVDYLVAPRVVACAVS 192

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326
           LP+L++++    +  + ++    Y I                ++     K       I I
Sbjct: 193 LPILSVISFTIGMAASILLADIRYGISPNAIVDSAAKYLESFDVGVMCAKGFAFGSVISI 252

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           ++   G      +  +G+  T  VV S+  + ++D   ++F+F 
Sbjct: 253 ISCGWGQTTTGGAKGVGESTTASVVISLVAIFVVDFFLSMFFFK 296


>gi|86609938|ref|YP_478700.1| hypothetical protein CYB_2505 [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86558480|gb|ABD03437.1| putative membrane protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 252

 Score =  208 bits (531), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 66/239 (27%), Positives = 119/239 (49%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G      G+      + +    + + Q+  VG+  + +V++ + V   V   Q A +  
Sbjct: 4   VGSSFLLAGQVILHLMRGRIHRRNTLDQLSAVGLESLLIVLITAVVISGVFTIQLAREFI 63

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            FGA      +++I   RE+  ++TAV++AGR GSA  AE+G+MK+ E+IDA+  +  D 
Sbjct: 64  NFGASSLIGGVLAIALARELTPVVTAVILAGRVGSAFAAELGTMKVTEQIDALLLLRTDP 123

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A  + LP+LTIL+  + ++G  I+    Y+I  AVF +   +  +  ++ 
Sbjct: 124 VDYLVIPRVLAAGLMLPVLTILSLLTGLVGGMIICASAYNISPAVFLNSAQTLLSSWDLL 183

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
              +KA      I IV    G +    +  +G+  T  VV ++  V + + L +   F 
Sbjct: 184 VCCLKAMVFGSLIAIVGSNWGLSTSGGAKGVGRSTTDAVVTALLGVFVTNFLISWLLFQ 242


>gi|88658302|ref|YP_506914.1| hypothetical protein ECH_0084 [Ehrlichia chaffeensis str. Arkansas]
 gi|88599759|gb|ABD45228.1| conserved hypothetical protein [Ehrlichia chaffeensis str.
           Arkansas]
          Length = 275

 Score =  208 bits (531), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 60/259 (23%), Positives = 118/259 (45%), Gaps = 7/259 (2%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           L   IG+ ++  I +           + N        +    +   +++Q   +    +P
Sbjct: 23  LLETIGRYVINVIFNVGHSFIFFVKFVYNC-------FVPPYYYGVILKQFIEIFFFSLP 75

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +V + +  TGAV+  Q +  +    +  F   ++ +  +RE+G +L  ++IAGR G+AI 
Sbjct: 76  IVGITAIFTGAVLILQNSLIIHNNVSGDFVSGVVVVAIVRELGPVLIGLIIAGRVGAAIA 135

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG+M+I E+IDA+ T+  +  + L+ PRI + ++++P+L + A+     G  IV    
Sbjct: 136 AEIGTMRITEQIDALFTLDTNPFKYLVVPRIISAMVAMPILILCADLIGAYGGYIVGSYQ 195

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
                 ++           ++  GL+KA      I  +    G+     +  +G   T  
Sbjct: 196 LGYTSEMYIKGVIKFLHAKDVALGLVKATVFGFIISFMGCYSGYYCSGGARGVGLATTYV 255

Query: 350 VVQSISIVIIIDSLFAIFY 368
           VV S   +I+ + +  +FY
Sbjct: 256 VVVSSMFIILFNYIITVFY 274


>gi|282860201|ref|ZP_06269275.1| conserved hypothetical protein [Prevotella bivia JCVIHMP010]
 gi|282587022|gb|EFB92253.1| conserved hypothetical protein [Prevotella bivia JCVIHMP010]
          Length = 248

 Score =  208 bits (531), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 63/245 (25%), Positives = 112/245 (45%), Gaps = 1/245 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +     G  +   G   +   + + FL S IR+M  +GV  + +V+LISF  GAVI  
Sbjct: 3   IVNWLTSFGKYLMLMGRTFSRPERIRMFLKSYIREMSQLGVDSIGIVLLISFFIGAVICI 62

Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +    ++  + L E    +  ++++G+ GS I +E+G+M++ ++IDA
Sbjct: 63  QIRLNVQSPWMPHWVSGYVTREIMLLEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDA 122

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I  L+  +P L I +  + ++GA    +  + I  +        
Sbjct: 123 LEIMGINSASYLILPKILGLVTIMPFLVIFSAATGMLGAYATAYIGHIISPSDLTDGVQH 182

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                 ++  +IK+ F A  I  VA   G+ V   S  +GK  T  VV S  +V+  D  
Sbjct: 183 QFNQWFMWMSIIKSLFFAFIIASVAAYMGYTVKGGSQEVGKASTDAVVTSSVLVLFSDVF 242

Query: 364 FAIFY 368
                
Sbjct: 243 LTQIL 247


>gi|159026095|emb|CAO86324.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 288

 Score =  208 bits (531), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 61/267 (22%), Positives = 115/267 (43%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
           ++  +++   +   +  F  +  S      L I  TG      +  K        QM   
Sbjct: 11  FSLVRSILVAMKDLLAIFSKELSSWFRRCWLAILLTGRVFYFLFTRKPDWRVTQEQMVAA 70

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G + + + ++ + V G +   Q A +    GA      ++++   RE+  ++ A+++AGR
Sbjct: 71  GPASLIIAMITAAVIGMIFTIQVAREFQALGAGSMVGGILALALGRELCPIMMAIVVAGR 130

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
            GSA  AEIG+MK+ E+IDA+  +  D V  L+ PR+ A  + +P L+I+A    +    
Sbjct: 131 VGSAFAAEIGTMKVTEQIDALYMLKTDPVEYLVLPRLIACCLMVPALSIMALLIGLGSGL 190

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           +V    Y I  +VF         + ++ +G +K       I I+    G      +  +G
Sbjct: 191 LVGQSLYGIANSVFLDSVRGFLRVGDVLSGPVKGLVFGALIAIIGCNWGLTTDGGAKGVG 250

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  T  VV  +  + + + L     F 
Sbjct: 251 QATTAAVVTMLLAIFVSNLLMTWILFQ 277


>gi|89068948|ref|ZP_01156330.1| membrane protein [Oceanicola granulosus HTCC2516]
 gi|89045529|gb|EAR51593.1| membrane protein [Oceanicola granulosus HTCC2516]
          Length = 258

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 58/264 (21%), Positives = 117/264 (44%), Gaps = 7/264 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
              L   IG   +  +         +   +S+        +  + F  +++     VG  
Sbjct: 1   MTGLLARIGAATLALLAGIGRMVIFVAETLSH---LVRPPFYAREFGHAVMS----VGWQ 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PVV L +F TG  +A Q     ++F AE     ++++  +RE+G +L  +MIA R  S
Sbjct: 54  SLPVVGLTAFFTGGALALQIYSGGARFSAEALVPQIVAVGMVRELGPVLVGLMIAARVTS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           +I AEI +MK+ E++DA+ T+  + ++ L  PR+ A ++++P+L  + +   I G  +V 
Sbjct: 114 SIAAEIATMKVTEQLDALVTLSTNPMKYLTLPRVLAALLTVPVLVAVGDVIGIFGGYLVG 173

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
               D   A + +         ++ + L+K         +     G      +  +G+  
Sbjct: 174 IYRLDFNPANYITNTVDFLEAHDVISSLVKGGAFGLIAALTGCYYGMQSDRGAQGVGRAT 233

Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370
            T VV +  +++  + L    +F+
Sbjct: 234 KTAVVVAAVLILAANFLLTEAFFS 257


>gi|187931162|ref|YP_001891146.1| ABC-type transport system permease protein [Francisella tularensis
           subsp. mediasiatica FSC147]
 gi|187712071|gb|ACD30368.1| ABC-type transport system permease protein [Francisella tularensis
           subsp. mediasiatica FSC147]
          Length = 254

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 65/235 (27%), Positives = 120/235 (51%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +  +          K  +   I Q+  VGV+ + +++      G V++ QG + LS+FGA
Sbjct: 18  LVKSLSLILRIVISKLNIRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGA 77

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
                 ++++  LRE+G ++TA++ AGR+ S+I +EIG MK  ++I++ + M ++ +  +
Sbjct: 78  HSLLGVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKATDQINSFKVMNVNPISFI 137

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           +S R WA +IS P+L ++    AI+   I+      I +  F+S   S+ T ++I  G+I
Sbjct: 138 LSTRFWACMISGPILALIFASVAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGII 197

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           K+   A     +A+ +G+     SN + K  T  VV     V+  D +     F 
Sbjct: 198 KSIVFAFITAWIALYQGYYCIPDSNGIAKATTKTVVYCCMSVLGADLILTSIMFG 252


>gi|196228069|ref|ZP_03126936.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428]
 gi|196227472|gb|EDY21975.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428]
          Length = 260

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 68/248 (27%), Positives = 117/248 (47%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +      + S    LG + +   E C S          ++RQ+  VG     VV++    
Sbjct: 2   VTTIGRIALSLLQYLGELATLVSETCVSLVVAPIRWRLVLRQIVEVGWRSQMVVVVTGGF 61

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TGAV+A Q  FQ S+ G +     ++++   RE+  +LT +M++GR G+AI AEIG+MK+
Sbjct: 62  TGAVLAAQAYFQFSRLGMKSAVGSMVAVSMFRELAPVLTGLMVSGRVGAAIAAEIGTMKV 121

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+R++G+     L+ PR+ AL+ S+PLL       +++   ++     DI  A +
Sbjct: 122 TEQIDALRSLGVHPTDYLVVPRVLALLFSMPLLVAECCAVSVLAGYVLGVHVLDISAAYY 181

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                  A   ++   L K       I  +A  +G      +  +G+  T  VV     V
Sbjct: 182 VRNMLLYAGPRDLKMALTKGLVFGIVIVFIACHQGLKTSNGAVGVGRAPTEAVVNGSLAV 241

Query: 358 IIIDSLFA 365
           +I++    
Sbjct: 242 LILNFFLT 249


>gi|126740431|ref|ZP_01756119.1| membrane protein [Roseobacter sp. SK209-2-6]
 gi|126718567|gb|EBA15281.1| membrane protein [Roseobacter sp. SK209-2-6]
          Length = 260

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 55/254 (21%), Positives = 115/254 (45%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           + +    +      +G V           ++   +   ++  +  VG   +PVV L +  
Sbjct: 7   LARLGRMALGALAAIGRVTLFALSTFTHMFRPPYYPREVLLSLLQVGWLSLPVVGLTAVF 66

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG  +A Q     ++F AE     +++I  +RE+G +L  +MIA R  S+I AEI +MK+
Sbjct: 67  TGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKV 126

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+ T+  + ++ L++PR+ A ++++P+L  + +   I G   V     D   A +
Sbjct: 127 TEQIDALVTLSTNPMQYLVAPRVLAALVTVPVLVGVGDIIGIAGGYTVAVYNLDFNSAAY 186

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                      ++ + L+K  F       +    G   G  +  +G+   + V  +  ++
Sbjct: 187 LKNTVDFLEPLDLISSLVKGAFFGTIAATMGCYYGMQSGRGAQGVGRATKSSVEAAAVLI 246

Query: 358 IIIDSLFAIFYFAI 371
           +  + +    +F++
Sbjct: 247 LAANFILTGVFFSL 260


>gi|255034005|ref|YP_003084626.1| hypothetical protein Dfer_0190 [Dyadobacter fermentans DSM 18053]
 gi|254946761|gb|ACT91461.1| protein of unknown function DUF140 [Dyadobacter fermentans DSM
           18053]
          Length = 262

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 61/210 (29%), Positives = 111/210 (52%)

Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209
           +     +++Q Y +G   + ++ L  F+TG V  +Q    LS+FGA  +   L++I  +R
Sbjct: 39  RMEFQEIVKQCYAIGNKSLLLISLTGFITGMVFTKQSRPSLSEFGATSWLPSLVAIAIVR 98

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
            +  L+TA++ AG+ GS+I AE+GSM++ E+IDA+    ++  + L+  R+ A  I++P+
Sbjct: 99  ALAPLVTALISAGKIGSSIGAELGSMRVTEQIDAMEVSAVNPFKFLVVTRVVACTIAIPV 158

Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329
           L       +++GA + +       F  FF       T  +I+T + KA      IGIV  
Sbjct: 159 LMFYCALVSLLGAYLNVTLNEGTSFIAFFENAFEQITFLDIWTSVAKAIAYGFTIGIVGS 218

Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
            +G+     +  +GK   + VV S+ ++ I
Sbjct: 219 YQGYNASKGTEGVGKAANSAVVTSMFLIFI 248


>gi|313109004|ref|ZP_07794978.1| hypothetical protein PA39016_001650017 [Pseudomonas aeruginosa
           39016]
 gi|310881480|gb|EFQ40074.1| hypothetical protein PA39016_001650017 [Pseudomonas aeruginosa
           39016]
          Length = 240

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 94/241 (39%), Positives = 144/241 (59%), Gaps = 2/241 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G +I           +++    S+I Q+    V  +P+V L+SF+ G V+A  GA  L+
Sbjct: 1   MGQIIETWSRTVRHPRRWRA--TSVIAQIQRSAVDAIPIVALLSFMVGMVVAFLGATVLA 58

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            FGA IFS+ L++   +RE GVLL A++IAGR+ SA  A+IGSMK NEEIDA+R+  LD 
Sbjct: 59  NFGASIFSVHLVAFSFMREFGVLLPAILIAGRTASAYTAQIGSMKANEEIDALRSNALDP 118

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           + +L+ PR+ AL++SLPLLT++   + I G + V     +IP A F +       + +  
Sbjct: 119 IELLVLPRVLALLVSLPLLTLVGILAGIAGGATVCALSLEIPPAQFLAIVQEKIEVRHFL 178

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
            G+ K+P  A  I  +   EGF V   + S+G   T+ VVQSI +VI+ID++ A+F+  +
Sbjct: 179 VGMSKSPLFAVMIAAIGCHEGFKVAGSAESVGDHTTSSVVQSIFMVILIDAIAALFFMEM 238

Query: 372 G 372
           G
Sbjct: 239 G 239


>gi|317050884|ref|YP_004112000.1| hypothetical protein Selin_0700 [Desulfurispirillum indicum S5]
 gi|316945968|gb|ADU65444.1| protein of unknown function DUF140 [Desulfurispirillum indicum S5]
          Length = 256

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 76/254 (29%), Positives = 126/254 (49%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +            + G++           ++    L  + +Q   +GV+ + VV+L  
Sbjct: 3   RILNSLGQGMYHAMQVSGMIFFTFLHSALWLFRPPLRLRVIFKQFESIGVNSIFVVLLTG 62

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
             TG V+A Q     SQF AE     + ++   RE+G +LTA+M+  R+GSA+ AE+G+M
Sbjct: 63  TFTGMVLALQLYIGFSQFHAEYLVGAVSALAIFRELGPVLTALMVTARAGSAMAAELGTM 122

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K+ E+IDA+RTM +D  + L +PRI A  + LP+LT++AN  AI G   V  K   I   
Sbjct: 123 KVTEQIDALRTMAVDPHQYLATPRILASFVMLPVLTMVANAVAIGGCYFVGVKLLGINPV 182

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           VF  +      + +I  GLIK+      +G V    G      +  +G+  TT VV + +
Sbjct: 183 VFVDQIIIFVDMGDIINGLIKSAAFGLVMGSVCCGIGMNASKGAAGVGQATTTSVVLTST 242

Query: 356 IVIIIDSLFAIFYF 369
           +++ +D +     F
Sbjct: 243 LILAVDYILTALMF 256


>gi|260910011|ref|ZP_05916695.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Prevotella sp. oral taxon 472 str. F0295]
 gi|260635870|gb|EEX53876.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Prevotella sp. oral taxon 472 str. F0295]
          Length = 248

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 58/245 (23%), Positives = 110/245 (44%), Gaps = 1/245 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +  + LG  +   G   +   + + F    +++M  +GV  V +V+LISF  GAVI  
Sbjct: 3   ILNYLNTLGQYLILMGRSFSRPERMRMFFKRYVKEMSQLGVDSVGIVLLISFFIGAVICI 62

Query: 185 QGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +        + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 63  QMKLNIQSPWMPRWVSGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 122

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P++  L+  +P L I ++   I+GA    +  + +           
Sbjct: 123 LDIMGVNSASYLILPKVLGLVTIMPFLVIFSSAMGILGAYATAYIGHILTPDDLTLGIQH 182

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
           +     ++  ++K+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D  
Sbjct: 183 SFNPWFMWMSIVKSLFFAYIIASVSSYFGYTVEGGSVEVGKASTDAVVSSSVLILFSDVF 242

Query: 364 FAIFY 368
                
Sbjct: 243 LTQML 247


>gi|289806792|ref|ZP_06537421.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. AG3]
          Length = 212

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 1/211 (0%)

Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
           Y VGV  + ++I+     G V+  QG   L+ + AE     L+++  LRE+G ++ A++ 
Sbjct: 1   YNVGVLSMLIIIVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLF 60

Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280
           AGR+GSA+ AEIG M+  E++ ++  M +D +R +ISPR WA +ISLPLLTI+     I 
Sbjct: 61  AGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIW 120

Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339
           G S+V   +  I    F+S   +      ++   LIK+   A  +  +A+  G+     S
Sbjct: 121 GGSLVGVSWKGIDAGFFWSAMQNAVDWRMDLVNCLIKSVVFAITVTWIALFNGYDAIPTS 180

Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             + +  T  VV +   V+ +D +     F 
Sbjct: 181 AGISRATTRTVVHASLAVLGLDFVLTALMFG 211


>gi|260435355|ref|ZP_05789325.1| ABC-type transport system, permease component [Synechococcus sp. WH
           8109]
 gi|260413229|gb|EEX06525.1| ABC-type transport system, permease component [Synechococcus sp. WH
           8109]
          Length = 249

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 66/239 (27%), Positives = 115/239 (48%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  +   G+  A++ + +     L  QM   G   + +V++IS   G+V   Q A +L+
Sbjct: 10  LGTSLLIGGQAVAATLRGRINRGELFEQMLEAGPGSLLIVLIISVAAGSVFNIQVAAELT 69

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + GA      +++I   REI  LLT+ ++AG+  +A  A++G+MK+ E+IDAI  +  D 
Sbjct: 70  RQGAGSTVGGILAIGLAREIAPLLTSCLLAGKVATAYAAQLGTMKVTEQIDAITMLRTDP 129

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A+++  P+      F A+    +     Y+IP AVF++   +     ++ 
Sbjct: 130 VEYLVVPRMIAMVVMAPVQCFFFFFVAVWSGQLTSTALYNIPPAVFWTSVQTWMNPLDLP 189

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             L+KA      I  VA   G         +G   T  VV  + +V ++D +     F 
Sbjct: 190 FMLVKALVFGLIIATVACGWGLTTRGGPKEVGTSTTGAVVMILILVALMDVVLTQVLFG 248


>gi|114798102|ref|YP_759452.1| hypothetical protein HNE_0724 [Hyphomonas neptunium ATCC 15444]
 gi|114738276|gb|ABI76401.1| putative membrane protein [Hyphomonas neptunium ATCC 15444]
          Length = 261

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 72/267 (26%), Positives = 132/267 (49%), Gaps = 7/267 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
            +N    IG+  +    +       +G +    G    +++  + +   ++RQ+  +G  
Sbjct: 2   MQNPIQLIGRATLGLFGE-------VGRLAVFAGRVKGAAFTPRWYGGEILRQIVRIGFY 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PVV L +   GA +A       S++GAE F   ++ +   RE+GV++T +M+AGR  +
Sbjct: 55  SLPVVGLAAVFIGAALALNIYEGGSRYGAEQFVPSIVVLGITRELGVVITGLMLAGRVSA 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
            I AEIG+M++ E+IDA+ T+     R L +PR  A +I+LP+L  LA+   ++G  +V 
Sbjct: 115 GIAAEIGAMRVTEQIDALETLSASRYRYLYAPRFIAALITLPMLVALADIIGVMGGWLVS 174

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
               D    V+        TL +IF GLIKA      I I+   +G      +  +G+  
Sbjct: 175 VYGLDFDSTVYLRNTLDFLTLNDIFAGLIKAVVFGGVIAIMGCYQGDRSQAGATGVGRAA 234

Query: 347 TTCVVQSISIVIIIDSLFAIFYFAIGI 373
           T  +V +  +++  + + +  +  IG+
Sbjct: 235 TLSMVGAAVLILAFNYVMSTVFVEIGL 261


>gi|226305212|ref|YP_002765170.1| YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229490705|ref|ZP_04384543.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
 gi|226184327|dbj|BAH32431.1| putative YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229322525|gb|EEN88308.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
          Length = 264

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 57/245 (23%), Positives = 115/245 (46%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
                 G ++    +   ++++        I Q +++    +    L++   GAV++ Q 
Sbjct: 14  GALTQAGNIVELFVDVVRNTFRRPFQFREFIEQAWFIASVTILPTALVAIPFGAVVSLQT 73

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
              + Q GAE F+     +  +++   L+TA+++AG +GSA+ A++GS  I EEIDA+  
Sbjct: 74  GSLIKQLGAESFTGAASVLAVIQQGSPLVTALLVAGAAGSAVTADLGSRTIREEIDAMEV 133

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +G++ ++ L+ PR+ A+++   LL  L +   I G               + S F + A 
Sbjct: 134 LGINPIQRLVVPRVLAMVLIAVLLNGLVSVVGIAGGYFFNVILQGGNPGAYISSFSAFAQ 193

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L +I++G IKA       G+++  +G         +G+ V   VV +  ++   + +  +
Sbjct: 194 LPDIWSGEIKAAVFGVIAGVISAYKGLHPSGGPKGVGEAVNQAVVITFLLLFFANLILTM 253

Query: 367 FYFAI 371
            Y  I
Sbjct: 254 VYLQI 258


>gi|329114428|ref|ZP_08243190.1| Putative ABC transporter permease protein [Acetobacter pomorum
           DM001]
 gi|326696504|gb|EGE48183.1| Putative ABC transporter permease protein [Acetobacter pomorum
           DM001]
          Length = 321

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 63/271 (23%), Positives = 128/271 (47%), Gaps = 7/271 (2%)

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
           +S   +   +L   +G+  +  I  + + A       S         +  + FL + +  
Sbjct: 57  QSTLMDMVLDLVARLGRATLSLIRAAGALAL---FAASGLSHIVRPPFYGRVFLSTFLE- 112

Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219
               G   +PVV L +  +G VIA Q     +Q+ A+     ++ +   RE+G +L  +M
Sbjct: 113 ---TGFFSLPVVALTALFSGGVIALQSYTGFAQYHAQSAIAGIVVLAVTRELGPVLAGLM 169

Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279
           +AGR G+A+ A+IG+M++ ++IDA+ T+  + ++ L++PR+ A +I+LPLL ++A+   +
Sbjct: 170 VAGRVGAAMAAQIGTMRVTDQIDALTTLSTNPMKYLVAPRLLAGLIALPLLVLVADILGV 229

Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339
            G   V           + +   ++    ++  GL+KA      I ++    G+     +
Sbjct: 230 AGGFTVAVVKLGFSAPAYITATLNSLKAIDVTVGLVKAALFGFLIALMGCYYGYNSKGGA 289

Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             +G   T  VV +  +++  D L    +F+
Sbjct: 290 EGVGSATTAAVVAASIMLLAFDYLLTDLFFS 320


>gi|11465859|ref|NP_054003.1| hypothetical protein PopuCp208 [Porphyra purpurea]
 gi|1723414|sp|P51393|YCF63_PORPU RecName: Full=Probable ABC transporter permease protein ycf63
 gi|1276859|gb|AAC08279.1| ORF263 [Porphyra purpurea]
          Length = 263

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 62/250 (24%), Positives = 113/250 (45%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           F  +       L   +S      A     K    SL  Q+Y VG   + + +L +     
Sbjct: 2   FQFELKKWIQKLNSTLSLFVSLLARLRTMKINTSSLAEQIYLVGPGSLNITLLTACFISM 61

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V   Q A +     A      ++ I   RE+  +LTAV+IAG+ GS+  AEI +M+  E+
Sbjct: 62  VFTMQIAKEFLHLDAASALGAVIVIAFTRELSPVLTAVIIAGKIGSSFTAEIATMETTEQ 121

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+  +  + +  L+ P++ A  I LP+L+ ++  ++I  +  V +  Y IP ++F   
Sbjct: 122 IDALYLLNTNPIDYLVFPKVAACCIMLPILSTISLTASIAISIFVSFVMYGIPSSIFLKS 181

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                ++++ F+ L K+      I  ++ + G      +  +G   T+ VV  +  + I 
Sbjct: 182 AFLALSVSDFFSCLQKSLCFGTIIAFISCQWGLTSSGGAKGVGNSTTSSVVTILLTIFIT 241

Query: 361 DSLFAIFYFA 370
           D + + F F 
Sbjct: 242 DFILSYFMFQ 251


>gi|282891606|ref|ZP_06300097.1| hypothetical protein pah_c180o100 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498574|gb|EFB40902.1| hypothetical protein pah_c180o100 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 262

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 73/244 (29%), Positives = 123/244 (50%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N        LG       +    + K       +  QM+ +GV  +PVV +  F TG V+
Sbjct: 2   NTMTKMLATLGDYFLLILKVIWVTIKRPPAWSLIRDQMFEIGVMSLPVVAITGFSTGLVL 61

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A Q  FQLS  G    +  +++   + E+G +LTA M+ GR G+++ AE+G+M++ E+ID
Sbjct: 62  AAQSFFQLSDKGLASATGLMVTKAMMVELGPILTAFMVTGRVGASMCAELGTMRVTEQID 121

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R+M ++ +R LI+PR  A    LPLLTI +    I+G  ++   YY +P + F     
Sbjct: 122 ALRSMSVNPLRYLIAPRFIAGTTMLPLLTIFSCLMGILGGYLLSVYYYQMPPSTFLDPLP 181

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
                 ++ +GLIKA      I  ++   G +    +  +G+  T  VV   S+++I + 
Sbjct: 182 LHIKTFDMVSGLIKAFIFGIIIITISCYRGLSTRGGAAGVGRATTNSVVICYSVILISNF 241

Query: 363 LFAI 366
           +  I
Sbjct: 242 IITI 245


>gi|83945272|ref|ZP_00957621.1| ABC transporter, permease protein, putative [Oceanicaulis
           alexandrii HTCC2633]
 gi|83851442|gb|EAP89298.1| ABC transporter, permease protein, putative [Oceanicaulis
           alexandrii HTCC2633]
          Length = 255

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 68/249 (27%), Positives = 122/249 (48%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                  +     G V    G+  A+  +   F   L++Q++ +G   +PVV L +  TG
Sbjct: 6   AIGAGLLALLRSAGAVALFAGQALAALVRPPYFGGQLVQQIFKIGFLSLPVVGLTALFTG 65

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           A +A       S+F AE F  +++++  +RE+G ++ A+M+AGR  S I AEIG+M+  E
Sbjct: 66  AALALNIYTGGSRFNAESFVPNIVAMGIVRELGPVIAALMLAGRVSSGIAAEIGAMRATE 125

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +IDA+ T+  D +R LI+PR+ A ++ LP+L   A+   I G  +V     D    ++  
Sbjct: 126 QIDALHTLATDPMRYLIAPRVLAGVLVLPILVATADIIGIYGGYLVSVHTLDFNPTIYVR 185

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                 +  +I +GLIKA      + ++    G+     +  +G+  T  VV +  ++  
Sbjct: 186 NTWDFLSDWDIISGLIKAAVFGFILTLMGCYHGYYAQGGAQGVGRAATNAVVAAAVLIFA 245

Query: 360 IDSLFAIFY 368
            + L    +
Sbjct: 246 ANFLLTSLF 254


>gi|182412508|ref|YP_001817574.1| hypothetical protein Oter_0685 [Opitutus terrae PB90-1]
 gi|177839722|gb|ACB73974.1| protein of unknown function DUF140 [Opitutus terrae PB90-1]
          Length = 250

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 63/245 (25%), Positives = 120/245 (48%), Gaps = 2/245 (0%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
               +    +G  +       +           LI Q + +G + +P+V ++SF  G+V+
Sbjct: 2   KQFHAIFEGIGSTVLLLVRSLSFIGTLPRQRARLIEQCFTIGYTTLPIVAILSFFIGSVL 61

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A Q  + +   GA+ +   L+ +   RE+G ++ A+++AGR GS+I AE+ SMK+ +E+D
Sbjct: 62  ALQAGYAMQNVGAKQYIGSLVGLSMARELGPVMVAILLAGRVGSSIAAELASMKVYQEVD 121

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI--WKYYDIPFAVFFSR 300
           A+ TM +   R+L+ PR+ A++  +P+L ++AN     G +IV     +  I    +F+ 
Sbjct: 122 ALVTMNIPPERMLVLPRLIAVLFMMPVLVMIANLVGWFGGAIVAKYTTFISIDPPAYFAV 181

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                   ++  GLIKA      + +V    G         +G  VT  VV S+ +++++
Sbjct: 182 LRRYTEFKDVLNGLIKAEVFGFGVVLVCCNIGLNTRGGPREIGAAVTQAVVTSLILILVL 241

Query: 361 DSLFA 365
           +    
Sbjct: 242 NYFVT 246


>gi|239904657|ref|YP_002951395.1| putative ABC transporter permease protein [Desulfovibrio magneticus
           RS-1]
 gi|239794520|dbj|BAH73509.1| putative ABC transporter permease protein [Desulfovibrio magneticus
           RS-1]
          Length = 256

 Score =  207 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 70/246 (28%), Positives = 128/246 (52%), Gaps = 1/246 (0%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLL-SLIRQMYYVGVSGVPVVILISFVTGAV 181
           +D      +   ++   G         K +L    I  + +VG   + +V +I+   G +
Sbjct: 6   DDLGVLVGLAVDLMRCAGRALRPWRPEKPYLRARTISHLAWVGADSLAIVSVIAACVGII 65

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           ++ Q A QL + GA  +  +L+    + E+G LLT ++++GR+G+A  AEI +M+I+EEI
Sbjct: 66  LSLQAAIQLEKVGAMSYVANLVGFSLVTELGPLLTCLILSGRAGAAFTAEIATMRISEEI 125

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  MG+D VR L+ P+  A+ +  PLLT+ A+   I    I       +   V+F++ 
Sbjct: 126 DALAVMGIDPVRFLVWPKFVAMAVMAPLLTLWADAVGITAGGIFSSLALGLSGKVYFNQI 185

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                  ++ +GL+K+     AI +++  +GF     +  +G++ T  VVQSI ++I++D
Sbjct: 186 AYFLGFKDLLSGLVKSAGFGVAITVISCWQGFLAREGAADVGRRTTAAVVQSIFVMILLD 245

Query: 362 SLFAIF 367
             F   
Sbjct: 246 LFFTAL 251


>gi|149918249|ref|ZP_01906741.1| putative ABC transporter, permease protein [Plesiocystis pacifica
           SIR-1]
 gi|149821009|gb|EDM80416.1| putative ABC transporter, permease protein [Plesiocystis pacifica
           SIR-1]
          Length = 273

 Score =  207 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 64/275 (23%), Positives = 121/275 (44%), Gaps = 7/275 (2%)

Query: 94  KNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFL 153
             +           ++    +G  I + I      A + G  +       A   +    L
Sbjct: 3   DPKSDAPPAKKPGIRDWAEGVGANINETIRWCGGMAVMFGQAM-------ARGPRRPWGL 55

Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
             +  Q+  +G+  +PV  ++S   G ++A Q    L+ FGA      + S+  +RE+  
Sbjct: 56  FDISYQILQLGIRSIPVTTMMSIFVGMILAWQFGEALADFGATNSIGYVTSLALVRELVP 115

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
            L AV +  +  + + AE+GSMK+ E+IDAI  +G D ++ L+ PR+ A  +++PLL   
Sbjct: 116 TLLAVTVGTKMATGMTAELGSMKVTEQIDAIAALGADPIKKLVWPRLVAACVAMPLLVAW 175

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
            N  A++G  ++    +DIP   F++ +       +      KA       GI+   +GF
Sbjct: 176 GNVIAMLGGMLISEAVFDIPAGYFYNSYIDELEPIHYVMSQTKALVFGALAGIIGCYQGF 235

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +    + ++G+  T  V+    +V+I D      +
Sbjct: 236 STKFGTEAVGQSTTETVIAVSVLVLIADFALTALF 270


>gi|170078977|ref|YP_001735615.1| ABC-type toluene export system, permease component [Synechococcus
           sp. PCC 7002]
 gi|169886646|gb|ACB00360.1| ABC-type toluene export system, permease component [Synechococcus
           sp. PCC 7002]
          Length = 259

 Score =  207 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 63/219 (28%), Positives = 107/219 (48%)

Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198
            G+      + K     +  QM   G   +  V+L++F  G +   Q A +L+ FGAE F
Sbjct: 23  LGQVLWRLLRGKLRRDQITEQMLTAGPKALVPVLLVAFFGGMIFTIQTARELTTFGAESF 82

Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258
                +I   RE+  +LTA +IAG+ GSA  AE+GSMKI E+IDA+  +  + V  L+ P
Sbjct: 83  VGGAFAIAFCRELAPILTASIIAGQVGSAFAAELGSMKITEQIDALYMLRSNPVDYLVMP 142

Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318
           R+ A  + LP+LT+ A    +IG +   +++YD+    F +   +     ++    +K  
Sbjct: 143 RVVACCLMLPILTVFALVVGVIGGTGAAYQFYDLAPINFLTSVQTFLQPRDLINVGVKGI 202

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                +GI+    G      +  +G+  T+ VV +   +
Sbjct: 203 LFGLLVGIIGCSWGLTTVGSTQQVGRSATSAVVTTWIGI 241


>gi|281421763|ref|ZP_06252762.1| ABC transporter, permease [Prevotella copri DSM 18205]
 gi|281404258|gb|EFB34938.1| ABC transporter, permease [Prevotella copri DSM 18205]
          Length = 248

 Score =  207 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 61/241 (25%), Positives = 109/241 (45%), Gaps = 1/241 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
               G  +   G   +   + + FL   I++M  +G+  + +V+LISF  GAVI  Q   
Sbjct: 7   LTTFGKYLILMGRSFSRPERMRMFLKQYIKEMSQLGIDSIGIVLLISFFIGAVICIQMKL 66

Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +       +        + L E    +  +++AG+ GS I +E+G+M++ ++IDA+  M
Sbjct: 67  NIQSPWMPRWVSGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALDIM 126

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    LI P+I  L+  +P L I ++   IIGA    +  + +P          +   
Sbjct: 127 GVNSACYLILPKILGLVTIMPFLVIFSSGMGIIGAYGTAYIGHILPPDDLTLGLQHSFNQ 186

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             ++  +IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D      
Sbjct: 187 WFVWMSIIKSLFFAFIISSVSSYFGYTVEGGSVEVGKSSTDAVVCSSVLILFSDVFLTQI 246

Query: 368 Y 368
            
Sbjct: 247 L 247


>gi|218441471|ref|YP_002379800.1| hypothetical protein PCC7424_4570 [Cyanothece sp. PCC 7424]
 gi|218174199|gb|ACK72932.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7424]
          Length = 266

 Score =  207 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 61/246 (24%), Positives = 110/246 (44%)

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
              S        +  +G         K      + QM  VG   + + ++ + V G +  
Sbjct: 9   GFGSWIQRTWAAVLLSGRAIFFVSIGKIDRQLTLEQMMAVGPGSLVIALITAAVIGMIFT 68

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
            Q A +    GA      ++++   RE+  ++TAV++AGR GSA  AEIG+M++ E+IDA
Sbjct: 69  IQVAREFLALGAGSAVGGILALSLARELSPIMTAVIVAGRVGSAFAAEIGTMQVTEQIDA 128

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  +  D +  L+ PR+ A  + +PL+TI+A    + G  ++    YDI   VF     +
Sbjct: 129 LYMLKTDPIEYLVVPRLVACCVMVPLMTIIALVIGLAGGLLIASSIYDISIEVFLDSIQT 188

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              +++I +G IK       I I+    G      +  +G+  T  VV  +  + + +  
Sbjct: 189 FLKISDILSGPIKGIVFGALIAIIGCNWGLTTTGGAKGVGESTTAAVVTCLLAIFVSNFF 248

Query: 364 FAIFYF 369
            +   F
Sbjct: 249 LSWIMF 254


>gi|159476846|ref|XP_001696522.1| lipid transfer machine permease [Chlamydomonas reinhardtii]
 gi|158282747|gb|EDP08499.1| lipid transfer machine permease [Chlamydomonas reinhardtii]
          Length = 245

 Score =  207 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 114/231 (49%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G+     +K      +   Q+  VG + + V +L +   G V   Q   + ++ G     
Sbjct: 5   GQVVLRIFKGNIHWKNTAEQLRLVGPASLGVSLLTAGFVGMVFTIQFVREFAKLGLTRSV 64

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
             ++++   RE+  ++TA+++AGR GSA  AE+G+M+++E++D++R +  D V  L++PR
Sbjct: 65  GGVLALALSRELTPVVTAIILAGRVGSAFAAELGTMQVSEQMDSLRVLYTDPVDYLVTPR 124

Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319
           + A +I+ P+L +L     +  A  +    Y++P  V         T  ++ T ++K+  
Sbjct: 125 VLASMIAGPILNVLCFLMGMGAAVFLADIVYNVPANVIVDSARRALTSYDVMTSMVKSWV 184

Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               +  ++   GF     +  +G+  T+ VV S+  + I D   ++ +F 
Sbjct: 185 FGTVVATISCAWGFTTSGGAKGVGESTTSAVVISLVTIFIADFFLSLVFFQ 235


>gi|288930100|ref|ZP_06423938.1| ABC transporter, permease [Prevotella sp. oral taxon 317 str.
           F0108]
 gi|288328573|gb|EFC67166.1| ABC transporter, permease [Prevotella sp. oral taxon 317 str.
           F0108]
          Length = 248

 Score =  207 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 59/245 (24%), Positives = 109/245 (44%), Gaps = 1/245 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +  + LG  +   G   +   + + F    +++M  +GV  V +V+LISF  GAVI  
Sbjct: 3   ILNYLNTLGQYLILMGRSFSRPERMRMFFKRYVKEMSQLGVDSVGIVLLISFFIGAVICI 62

Query: 185 QGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +        + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 63  QMKLNIQSPWMPRWVSGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 122

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I  L+  +P L I ++   I+GA    +  + +           
Sbjct: 123 LDIMGVNSASYLILPKILGLVTIMPFLVIFSSAMGILGAYATAYIGHILTPDDLTLGIQH 182

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                 ++  ++K+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D  
Sbjct: 183 AFKPWFMWMSIVKSLFFAYIIASVSSYFGYTVEGGSVEVGKASTDAVVSSSVLILFSDVF 242

Query: 364 FAIFY 368
                
Sbjct: 243 LTQML 247


>gi|222055035|ref|YP_002537397.1| protein of unknown function DUF140 [Geobacter sp. FRC-32]
 gi|221564324|gb|ACM20296.1| protein of unknown function DUF140 [Geobacter sp. FRC-32]
          Length = 257

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 62/246 (25%), Positives = 123/246 (50%), Gaps = 5/246 (2%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +       +  L     G      + ++ F      Q+  +GV  + +VIL    TG V+
Sbjct: 12  SFVLEVQELFFLSTRAIGCIVTPPFYYRDFTT----QLDKIGVGSLFIVILTGLFTGMVM 67

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A Q   QL  F A  +   ++++  ++E+G +L+++M+AGR GSAI AE+G+M + E++D
Sbjct: 68  ALQALIQLKPFAATSYVGGMVAVTMVKELGPVLSSLMVAGRVGSAITAELGTMVVTEQVD 127

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++  G D ++ L++ R+ A++I++PLL I+ +  +++G  I+    YDI   +++    
Sbjct: 128 AMQVEGTDIIKRLVTSRLKAIVIAMPLLAIITDAVSLVGGYIMAAN-YDINIIMYWKSIP 186

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
                 ++  G++K       I +V    G +    +  +G+     VV S   +++ D 
Sbjct: 187 QFMVFQDLIEGVVKPAVFGFIIAMVGCHVGLSTNGGAAGVGESAKRAVVISSVSILVTDF 246

Query: 363 LFAIFY 368
             A  +
Sbjct: 247 FIAKIF 252


>gi|116310403|emb|CAH67412.1| OSIGBa0143N19.6 [Oryza sativa Indica Group]
          Length = 345

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 110/236 (46%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
            +   G+        +    +L+ Q+  VG     V +L +   G     Q   + ++ G
Sbjct: 99  ALLLAGQVFHRVLTGRVHRRNLLAQLRRVGPGSAGVSLLTAAFVGMAFTIQFVREFTRLG 158

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
                  ++++   RE+  ++TAV+ AGR GSA  A++G+M+++E+ D +R +G   V  
Sbjct: 159 LHRSVGGVLALALSRELSPVVTAVVAAGRVGSAFAAKLGTMQVSEQTDTLRVLGAQPVDY 218

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L+ PR+ A +++LP+LT+++    +  ++ +    + +  ++            ++ + L
Sbjct: 219 LVVPRVVACVLALPVLTLMSFALGLASSAFLADSIFGVSTSIILESARRALRPWDLISSL 278

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +K+      I +V+   G      +  +G+  T+ VV S+  + + D   +  +F 
Sbjct: 279 LKSQVFGAIIAVVSCAWGVTTHGGAKGVGESTTSAVVVSLVGIFVADFALSCLFFQ 334


>gi|78355070|ref|YP_386519.1| transporter [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
 gi|78217475|gb|ABB36824.1| transporter, putative [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 250

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 69/217 (31%), Positives = 125/217 (57%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +  Q+   G   + +V +I+  TG ++A Q A QL + GA  +  +++S+  ++E+G LL
Sbjct: 34  MWHQLAETGTRSLGIVSVIAACTGMILALQAAQQLEKVGALSYVANMVSVTIVKELGPLL 93

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA+++AGRSG+A  AEI +M+I EEIDA+  +G+  VR L+ P++ A++I LP+LT+ A+
Sbjct: 94  TAIILAGRSGAAFCAEISTMQIYEEIDALEVIGISPVRYLVVPKLCAMLIMLPVLTLWAD 153

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              II   +       + F+ + ++        ++ + ++KA     AI ++   +GF  
Sbjct: 154 LVGIISGGLFAALGLGLSFSGYLNQAVYFLGTGDVVSSVVKAAGFGTAITLICCWQGFMA 213

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
              +  +G++ T  VVQSI +VI++D  F    +  G
Sbjct: 214 QGGAADVGRRTTKAVVQSIFMVILLDLFFTAINYLAG 250


>gi|260433527|ref|ZP_05787498.1| membrane protein [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417355|gb|EEX10614.1| membrane protein [Silicibacter lacuscaerulensis ITI-1157]
          Length = 260

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 55/254 (21%), Positives = 112/254 (44%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           + +      +     G V     +  +  ++   +   L   +  +G   +PVV L +  
Sbjct: 7   LAELGRAVLNLLAAFGRVTLFALDALSHIFRPPFYPRELGMALLNIGWLSLPVVGLTTIF 66

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG  +A Q     ++F AE     +++I  +RE+G ++  +MIA R  S+I AEI +MK+
Sbjct: 67  TGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVMVGLMIAARVTSSIAAEIATMKV 126

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+ T+    ++ L +PR+ A +I++P L  + +   I G   V  +      A +
Sbjct: 127 TEQIDALVTLSTHPMKYLTAPRVLAALITVPALVAVGDIIGIAGGYAVATQNLGFNPAAY 186

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                      +I + L+K         I+    G   G  +  +G+   + V  +  ++
Sbjct: 187 LKNTVDFLEPLDILSSLVKGAAFGMIAAIMGCYFGMNSGRGAQGVGRATKSSVEAAAVLI 246

Query: 358 IIIDSLFAIFYFAI 371
           +  + +    +F++
Sbjct: 247 LAANFVLTGVFFSL 260


>gi|212702437|ref|ZP_03310565.1| hypothetical protein DESPIG_00454 [Desulfovibrio piger ATCC 29098]
 gi|212674098|gb|EEB34581.1| hypothetical protein DESPIG_00454 [Desulfovibrio piger ATCC 29098]
          Length = 375

 Score =  206 bits (525), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 77/354 (21%), Positives = 150/354 (42%), Gaps = 11/354 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
                   +G+W             +   +        +  +++   D+     ++   +
Sbjct: 13  GERLQVTVSGSWAINTPWPPQCADALQQLQGPGIRQLHLAAASLDAWDSSLLVFLVQLHK 72

Query: 64  KY-HGKIKL-QGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
                +I++ Q +   + +L  L      +    +   R       + L   +G  ++  
Sbjct: 73  AASAARIEISQDLPAGLARLLHLAFAIPAQAGAARSDHR-------QGLFARVGGAVMSL 125

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                     LG V  +           +  +   +  MY  GV  +P++ + S + G +
Sbjct: 126 PPRCADFLEFLGDVTLSIWRLILGRAGMR--MQDFVEAMYECGVRALPIISITSLLFGLI 183

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A  GA QL+QFGA+I+   L+ I  LR +G ++  V+++GR G+A  A IG+M++NEE+
Sbjct: 184 LAFVGAVQLTQFGAQIYVAGLVGIGMLRVMGAVMVGVVMSGRVGAAYAAMIGTMQVNEEV 243

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+ T+G+  +  L+ PR+ AL+  +PLLT+ A+   I+G  +V      +  A + +  
Sbjct: 244 DALTTLGISPIDFLVLPRMLALMFMVPLLTVYADLMGILGGYVVGVSMLGLSSAEYLNAT 303

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
               +  +   G+         I +    +G   G  + ++G   TT VVQSI 
Sbjct: 304 MQMVSFVHGLIGIAYGTVFGVIIALAGCYQGIRCGRSAQAVGLATTTAVVQSIV 357


>gi|24214757|ref|NP_712238.1| ABC transporter membrane protein [Leptospira interrogans serovar
           Lai str. 56601]
 gi|45657720|ref|YP_001806.1| ABC transporter permease protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|24195758|gb|AAN49256.1| membrane protein of an ABC transporter complex [Leptospira
           interrogans serovar Lai str. 56601]
 gi|45600960|gb|AAS70443.1| ABC transporter permease protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 259

 Score =  206 bits (525), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 4/241 (1%)

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G  I    E   +          ++ QMY  GV  + VV +++  TG +++      L  
Sbjct: 17  GFTILLVYESILNLPYSFFKRKEILDQMYITGVGSISVVSIVAVFTGMIMSLNTGLGLKD 76

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
           FGAE     LM+I   RE+   +TA+++A   GSA+ AEIG+MK++EE+DA+  M +D V
Sbjct: 77  FGAEGQIGLLMTITLTREMSPFMTALILAASIGSAMAAEIGTMKVSEEVDALEVMSIDPV 136

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA----TLA 308
           R LI PRI    + +P+L + +    I+G +IV +    I +  +F            L 
Sbjct: 137 RYLIFPRILGFSVMVPVLCVYSTALGILGGAIVGYFQLGIDYFTYFRDVFDRIASIPGLK 196

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +++ G++K       +  ++   G      +  +G+     VV S  +VI    +    +
Sbjct: 197 DLYVGILKGFIFGIIVSAISCSHGLRTSGGAIGVGRATRESVVASFLMVIFTGYMITALF 256

Query: 369 F 369
           +
Sbjct: 257 Y 257


>gi|319945411|ref|ZP_08019671.1| tolerance efflux ABC superfamily ATP binding cassette transporter,
           membrane protein [Lautropia mirabilis ATCC 51599]
 gi|319741197|gb|EFV93624.1| tolerance efflux ABC superfamily ATP binding cassette transporter,
           membrane protein [Lautropia mirabilis ATCC 51599]
          Length = 260

 Score =  206 bits (525), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 68/265 (25%), Positives = 128/265 (48%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
              +   +G+     IND       L  ++  +                +  Q+Y+VG  
Sbjct: 1   MIGMLARLGRWARHVINDLGFAGRFLMQLLWASLLSLKRP-------RLISEQVYFVGNR 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++++     G V+  QG + L ++GAE     L+++  LRE+G +++A++ AGR+ +
Sbjct: 54  SLSIILISGLFVGFVLGLQGYYNLERYGAESSLGLLVALSLLRELGPVVSALLFAGRACT 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           +I A IG MK  E++ A+  MG+D ++ +++PR  A++I+LPLL +L +   I+GA +V 
Sbjct: 114 SITAGIGLMKSGEQLIAMEMMGVDPMKRVLAPRFMAVMIALPLLALLFSAVGIVGAWVVG 173

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
            +   +    F+S+     +   ++  G+IK+   A   G +A+  G         + + 
Sbjct: 174 VQMIGVDPGSFWSQMQGGVSFRADVLNGVIKSFVFALLCGFIALVVGHESDATPEGVARA 233

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            TT VV S   V+  D L     F 
Sbjct: 234 TTTTVVISSLAVLASDVLMTALMFG 258


>gi|90994584|ref|YP_537074.1| hypothetical protein 26 [Porphyra yezoensis]
 gi|122194637|sp|Q1XD94|YCF63_PORYE RecName: Full=Probable ABC transporter permease protein ycf63
 gi|90819148|dbj|BAE92517.1| unnamed protein product [Porphyra yezoensis]
          Length = 263

 Score =  206 bits (525), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 62/236 (26%), Positives = 113/236 (47%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
            I             K    +L+ Q+Y VG   + + +L +     V   Q A +     
Sbjct: 16  TIRLFFRLLIRLKTIKVNTNNLVEQIYIVGPGSLNITLLTACFISMVFTMQIAKEFLYLD 75

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
           A      ++ I   RE+  +LTAV+IAG+ GS+  AEI +M+  E+IDA+  +  + +  
Sbjct: 76  AASAIGAVIVIAFTRELSPVLTAVIIAGKIGSSFTAEIATMETTEQIDALYLLNTNPIDY 135

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L+ P++ +  + LP+L+I++  ++I  +  V +  YDIP +VF     +  ++++    L
Sbjct: 136 LVFPKVASCFLMLPILSIISLTASIAISLFVAFVMYDIPSSVFLKSAFNALSISDFLICL 195

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            K+ F A  IG ++ + G      +  +G   T+ VV  +  V I D + + F F 
Sbjct: 196 EKSMFFAIIIGFISCQWGLTSNGGAKGVGNSTTSSVVTILFTVFITDFVLSYFMFQ 251


>gi|296122312|ref|YP_003630090.1| hypothetical protein Plim_2064 [Planctomyces limnophilus DSM 3776]
 gi|296014652|gb|ADG67891.1| protein of unknown function DUF140 [Planctomyces limnophilus DSM
           3776]
          Length = 260

 Score =  206 bits (525), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 68/247 (27%), Positives = 123/247 (49%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +    +G     T          +     L    Y +G   +PV+++     G V+A 
Sbjct: 2   LLTSVRTVGDAAIFTSTVALGLATRRSRSAILWPIFYEIGCRSMPVILITGGFIGMVLAV 61

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q   QL+  G +     ++++  ++E+G +L A M+AGR GSA+ AEIG+MK+ E+IDA+
Sbjct: 62  QSFDQLAAIGLQSRLGSVVNVSLVKELGPVLAATMLAGRVGSAMAAEIGTMKVTEQIDAL 121

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           + +G + V  L+ PR  A ++ +P LT+LA+   ++    +  +   I   +++    S 
Sbjct: 122 QALGANPVMFLVCPRFLACVLLIPALTLLADGIGMLSGWYLSVQVLGISSHLYWFYSDSY 181

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            T  +I +G+IK+ F   AI +VA   GF     +  +G+  T   V S  +V+ +D L 
Sbjct: 182 ITSLDIISGVIKSIFFGGAIALVACHRGFHCSSGAEGVGRAATEAFVCSFILVLAMDFLL 241

Query: 365 AIFYFAI 371
            +F+  +
Sbjct: 242 GVFFIQL 248


>gi|254476887|ref|ZP_05090273.1| membrane protein [Ruegeria sp. R11]
 gi|214031130|gb|EEB71965.1| membrane protein [Ruegeria sp. R11]
          Length = 266

 Score =  206 bits (525), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 54/254 (21%), Positives = 113/254 (44%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           + +           +G V        +   +   +   ++  +  VG   +PVV L +  
Sbjct: 13  LARLGQMVLGALGAVGRVAIFGLSTFSHMVRPPYYPREVLNALLQVGWLSLPVVGLTAIF 72

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG  +A Q     ++F AE     +++I  +RE+G +L  +MIA R  S+I AEI +MK+
Sbjct: 73  TGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKV 132

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+ T+    ++ L++PR+ A ++++P+L  + +   I+G  +V  +      A +
Sbjct: 133 TEQIDALVTLSTHPMKYLVAPRVLAALLTVPVLVGVGDIIGIMGGYVVATQNLGFNPAAY 192

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                      +I + L+K          +    G   G  +  +G+     V  +  ++
Sbjct: 193 LKNTVDFLEARDIISSLVKGAAFGTIAATMGCYYGMQSGRGAQGVGRATKGSVEAAAVLI 252

Query: 358 IIIDSLFAIFYFAI 371
           +  + +    +F++
Sbjct: 253 LAANFVLTGVFFSL 266


>gi|33240854|ref|NP_875796.1| putative transporter, membrane component [Prochlorococcus marinus
           subsp. marinus str. CCMP1375]
 gi|33238383|gb|AAQ00449.1| ABC-type transport system involved in resistance to organic
           solvents permease component [Prochlorococcus marinus
           subsp. marinus str. CCMP1375]
          Length = 248

 Score =  206 bits (525), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 67/239 (28%), Positives = 112/239 (46%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG      G+   S+ K +     LI Q+   G +   +V++     G V   Q A +LS
Sbjct: 10  LGSSCIIGGQAVTSTTKGRFNKADLIDQLMEAGPASFLIVLITGVSAGTVFNIQVAAELS 69

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + G       L++I   REI  LLTA ++ G+  +A  A++G+MK+ E+IDAI  +  D 
Sbjct: 70  RQGLGSEVGGLLAIGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLKTDP 129

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A+++  PL  +L    A+    +    +Y IP  VF++       L ++ 
Sbjct: 130 VEYLVVPRLIAMVVMAPLQCLLFFSVALWSGQVSSTAFYSIPPNVFWNSVKEWIVLTDLP 189

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             LIKA      I ++A   G      +  +G   T  VV ++  V ++D +     F+
Sbjct: 190 FMLIKAVVFGLQIAVIACGWGLTTRGGAKEVGTSTTGAVVMTLLTVSLMDVVLTKVLFS 248


>gi|255530709|ref|YP_003091081.1| hypothetical protein Phep_0797 [Pedobacter heparinus DSM 2366]
 gi|255343693|gb|ACU03019.1| protein of unknown function DUF140 [Pedobacter heparinus DSM 2366]
          Length = 269

 Score =  206 bits (525), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 65/247 (26%), Positives = 113/247 (45%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  L  V      F    +        L RQ Y +G     ++    F+TG V  +
Sbjct: 21  LARMFLTLYDVYKFIARFFKEGFLPPYEARELFRQCYEIGYRSALLISTTGFITGIVFTK 80

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q    LS+FGA  +   L+ I  LR +  LLT ++ AG+ GS+I AE+GSM++ E+IDA+
Sbjct: 81  QSRPSLSEFGATSWLPSLVGIALLRTLAPLLTGLIAAGKVGSSIGAELGSMRVTEQIDAM 140

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
                +  + L+S R+ A  I++P+LT       ++GA + +          FF      
Sbjct: 141 EVSATNPFKFLVSTRVLAATITIPILTFYTAMVGMLGALLNVSLSEGTSARAFFQSSLEQ 200

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            T  +I    +KA      IG+V   +G+     +  +GK   + VV ++ ++ I + + 
Sbjct: 201 ITFLDITASTVKAILFGFTIGMVGCYQGYNSSKGTEGVGKAANSAVVIAMFLIFI-EEVV 259

Query: 365 AIFYFAI 371
           ++ +F +
Sbjct: 260 SVQFFGL 266


>gi|259416059|ref|ZP_05739979.1| membrane protein [Silicibacter sp. TrichCH4B]
 gi|259347498|gb|EEW59275.1| membrane protein [Silicibacter sp. TrichCH4B]
          Length = 260

 Score =  206 bits (525), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 58/250 (23%), Positives = 115/250 (46%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
              S  +   LG +        +   +   +       +  VG   +PVV L +  TG  
Sbjct: 11  GRTSLGRLAALGRITRFAASTFSHMLRPPFYPREFANALLQVGWLSLPVVALTAIFTGGA 70

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A Q     ++F AE     +++I  +RE+G +L  +MIA R  S+I AEI +MK+ E+I
Sbjct: 71  LALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQI 130

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+ T+  + ++ L++PR+ A +I++P+L  + +   I+G  +V  +  D   A +    
Sbjct: 131 DALVTLSTNPMKYLVAPRVLAALITVPVLVGVGDIIGIMGGYVVATETLDFNAAAYLKNT 190

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                L +I + L+K         ++    G   G  +  +G+     V  +  +++  +
Sbjct: 191 VDFLELRDIVSSLVKGAAFGTIAALMGCYYGMQSGRGAQGVGRATKGSVEAAAVLILAAN 250

Query: 362 SLFAIFYFAI 371
            +    +F++
Sbjct: 251 FVLTGVFFSL 260


>gi|297190651|ref|ZP_06908049.1| ABC-transporter integral membrane protein [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|197719878|gb|EDY63786.1| ABC-transporter integral membrane protein [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 281

 Score =  206 bits (525), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 64/273 (23%), Positives = 112/273 (41%)

Query: 99  QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158
                           G   V+  +   +     G + +   E   + ++    L   I 
Sbjct: 3   APPPVRPPALADDRPAGVPAVRGPSKLLAPLRETGKLFALAAEVTRAIFRRPFQLREFIE 62

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           Q ++V    +    L+S   GAVIA Q      Q GA+ F+     +  +++   L+ A+
Sbjct: 63  QFWFVASVTILPAALVSIPFGAVIALQVGSLTQQLGAQSFTGGASVLAVIQQASPLIVAL 122

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           +IAG  GSAI A++GS KI EE+DA+  MG+  V+ L+ PR+ A ++   LL  + +   
Sbjct: 123 LIAGAGGSAICADLGSRKIREELDAMEVMGVSPVQRLVVPRVLATMLVAVLLNGMVSVVG 182

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
            +G               + + F + A L +++   +KA       GIVA   G      
Sbjct: 183 TLGGYFFNVIMQGGTPGAYLASFSALAQLPDLYVSELKALIFGFIAGIVAAYRGLGPRGG 242

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
              +G  V   VV +  ++  ++ +    Y  I
Sbjct: 243 PKGVGDAVNQSVVITFMLLFFVNMVLTAIYLQI 275


>gi|159903919|ref|YP_001551263.1| putative transporter, membrane component [Prochlorococcus marinus
           str. MIT 9211]
 gi|159889095|gb|ABX09309.1| possible transporter, membrane component [Prochlorococcus marinus
           str. MIT 9211]
          Length = 248

 Score =  206 bits (524), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 70/239 (29%), Positives = 113/239 (47%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  +   G+   SS K       LI Q+   G +   +V++     G V   Q A +LS
Sbjct: 10  LGSSMLIGGQAITSSTKGNINKSDLIDQLMEAGPASFIIVLITGISAGTVFNIQVAAELS 69

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + G       L++I   REI  LLTA ++ G+  +A  A++G+MK+ E+IDAI  +  D 
Sbjct: 70  RQGVGSEVGGLLAIGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLQTDP 129

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           +  L+ PR+ A++I  PL  +L    A+    I    +Y IP  VF++  +    +++I 
Sbjct: 130 IDYLVVPRVIAMVIMAPLQCLLFFTVALWSGQISSTYFYSIPINVFWNSVNEWLVISDIP 189

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             LIKA      I ++A   G      +  +G   T  VV ++  V ++D L     F 
Sbjct: 190 FMLIKAVVFGFQIAVIACGWGLTTRGGAKEVGTSTTGAVVMTLLSVSLMDVLLTKVLFG 248


>gi|87303089|ref|ZP_01085887.1| possible transporter, membrane component [Synechococcus sp. WH
           5701]
 gi|87282256|gb|EAQ74216.1| possible transporter, membrane component [Synechococcus sp. WH
           5701]
          Length = 249

 Score =  206 bits (524), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 64/242 (26%), Positives = 112/242 (46%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
            H LG  +   G+  ++  K +  L  L  QM   G     +VI+ +   G V   Q A 
Sbjct: 7   IHRLGSSVMIGGQSISALAKGRINLNDLFEQMLEAGPGSFLIVIITALAAGTVFNIQVAA 66

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           +L++ GA      ++++   REI  LLTA ++ G+  +A  A++G+MK+ E+IDAI  + 
Sbjct: 67  ELTRQGAGFSVGGILALGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLR 126

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
            D V  L+ PR+ A+++  P+  +L     I    +     Y IP  VF++   +    +
Sbjct: 127 TDPVEYLVVPRVLAMVVMAPVQCLLFFVVGIWSGQVSSTFLYSIPPTVFWNSVRTWMEPS 186

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           ++ + L+KA      I ++A   G         +G   T  VV  +  V ++D +     
Sbjct: 187 DLPSMLVKALVFGLQIAVIACGWGLTTRGGPKEVGTSTTGAVVMILVTVSLVDVVLTQVL 246

Query: 369 FA 370
           F 
Sbjct: 247 FG 248


>gi|294816012|ref|ZP_06774655.1| Putative YrbE family protein [Streptomyces clavuligerus ATCC 27064]
 gi|326444354|ref|ZP_08219088.1| putative YrbE family protein [Streptomyces clavuligerus ATCC 27064]
 gi|294328611|gb|EFG10254.1| Putative YrbE family protein [Streptomyces clavuligerus ATCC 27064]
          Length = 293

 Score =  206 bits (524), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 63/247 (25%), Positives = 110/247 (44%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           + +  H  G   + T E   S ++    L   I Q ++V    +    L+S   GAVIA 
Sbjct: 41  ALAPLHETGRFFALTAEIVRSVFRRPFQLREFIEQFWFVASVTILPAALVSIPFGAVIAL 100

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      Q GA+ F+     +  +++   L+ A++IAG  GSAI A++GS KI EE+DA+
Sbjct: 101 QVGSLTQQLGAQSFTGGASVLAVIQQASPLIVALLIAGAGGSAICADLGSRKIREELDAM 160

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  ++ L+ PR+ A ++   LL  + +    +G         D     + + F + 
Sbjct: 161 EVMGVSPIQRLVVPRVLATMLVAFLLNGMISVVGTLGGYFFNVIMQDGTPGAYLASFSAL 220

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A L +++    KA       G+VA   G         +G  V   VV +  ++  ++ + 
Sbjct: 221 AQLPDLYISEFKALVFGFIAGVVAAHRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMII 280

Query: 365 AIFYFAI 371
              Y  +
Sbjct: 281 TAIYLQV 287


>gi|255533344|ref|YP_003093716.1| hypothetical protein Phep_3461 [Pedobacter heparinus DSM 2366]
 gi|255346328|gb|ACU05654.1| protein of unknown function DUF140 [Pedobacter heparinus DSM 2366]
          Length = 244

 Score =  206 bits (524), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 69/239 (28%), Positives = 115/239 (48%), Gaps = 1/239 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL- 190
            G  +           KFK +L ++ +QM ++GV  + ++ +IS   GAV+  Q AFQL 
Sbjct: 6   FGRYLLLLKAVFRRPEKFKIYLKAIFKQMDFIGVGSLGLIAIISTFIGAVMTLQIAFQLV 65

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
           S F  +     +     + E+   ++A+++AG+ GSAI +EIG+M+++E+IDA+  MG++
Sbjct: 66  SDFIPKTIIGSVNRDSSILELSPTISAIVLAGKIGSAISSEIGTMRVSEQIDALEIMGIN 125

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
               LI P+I A I  +PLL I++ F +I G  I       +  A +     +      I
Sbjct: 126 SPGYLILPKIIAGITMVPLLVIMSMFLSITGGYIGGTLSGAVSPAEYIQGITTDFNPYTI 185

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              L+KA      I  V   EGF V   +  + +  T  VV S   ++  D +      
Sbjct: 186 TVALVKAFVFGFIITSVPAYEGFYVKGGALEVAQASTRAVVVSCISILACDYIVTQLLL 244


>gi|33865118|ref|NP_896677.1| transporter, membrane component [Synechococcus sp. WH 8102]
 gi|33638802|emb|CAE07097.1| possible transporter, membrane component [Synechococcus sp. WH
           8102]
          Length = 249

 Score =  206 bits (524), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 64/239 (26%), Positives = 115/239 (48%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  +   G+   ++ + +   + L  Q+   G   + +V++IS   G+V   Q A +L+
Sbjct: 10  LGASLLIGGQAVTATLRGRINTVDLQDQLMEAGPGTLLIVLIISIAAGSVFNIQVAAELT 69

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + GA      +++I   REI  LLT+ ++AG+  +A  A++G+MK+ E+IDAI  +  D 
Sbjct: 70  RQGAGSTVGGILAIGLAREIAPLLTSCLLAGKVATAYAAQLGTMKVTEQIDAITMLRTDP 129

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A+++  P+        A+    I     Y+IP AVF++   +     ++ 
Sbjct: 130 VEYLVVPRMIAMVVMAPVQCFFFFLMAVWSGQITSTALYNIPPAVFWTSVRTWMDPTDLP 189

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             L+KA      I ++A   G         +G   T  VV  + +V I+D +     F 
Sbjct: 190 FMLVKALVFGLIIAVIACGWGLTTKGGPKEVGTSTTGAVVMILILVAIMDVVLTQVLFG 248


>gi|166365969|ref|YP_001658242.1| hypothetical protein MAE_32280 [Microcystis aeruginosa NIES-843]
 gi|166088342|dbj|BAG03050.1| hypothetical protein MAE_32280 [Microcystis aeruginosa NIES-843]
          Length = 268

 Score =  205 bits (523), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 58/250 (23%), Positives = 108/250 (43%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           F  +  S      L +  TG      +  +        QM   G + + + ++ + V G 
Sbjct: 8   FSKELSSWFRRCWLAVLLTGRVFYFLFTRQPDWRVTQEQMVAAGPASLIIAMITAAVIGM 67

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           +   Q A +    GA      ++++   RE+  ++ A+++AGR GSA  AEIG+MK+ E+
Sbjct: 68  IFTIQVAREFQALGAGSMVGGILALALGRELCPIMMAIVVAGRVGSAFAAEIGTMKVTEQ 127

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+  +  D V  L+ PR+ A  + +P L+++A    +    +V    Y I  +VF   
Sbjct: 128 IDALYMLKTDPVEYLVLPRLIACCLMVPALSVMALLIGLGSGLLVGQSLYGIANSVFLDS 187

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                 + ++ +G +K       I I+    G      +  +G+  T  VV  +  + + 
Sbjct: 188 VRGFLGVGDVLSGPVKGVVFGALIAIIGCNWGLTTDGGAKGVGQATTAAVVTMLLAIFVS 247

Query: 361 DSLFAIFYFA 370
           + L     F 
Sbjct: 248 NLLMTWILFQ 257


>gi|237708018|ref|ZP_04538499.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|237725290|ref|ZP_04555771.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|265754195|ref|ZP_06089384.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|229436556|gb|EEO46633.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
 gi|229458004|gb|EEO63725.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|263234904|gb|EEZ20459.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 251

 Score =  205 bits (523), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 67/243 (27%), Positives = 112/243 (46%), Gaps = 1/243 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G  I   G   A   + + F    + +M  +GV+ + +V+LISF  GAVI  Q   
Sbjct: 9   ITTVGKYIMLMGRTFARPERMRMFFKQYLNEMVQLGVNSIGIVLLISFFIGAVITIQIKL 68

Query: 189 QLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +       F +   +  + L E    +  +++AG+ GS I +EIG+M++ ++IDA+  M
Sbjct: 69  NIESPWMPRFVVGYTTREIMLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALEIM 128

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    LI P+I AL+  +P L I + FS IIGA    W    +           +   
Sbjct: 129 GVNSAGYLILPKIIALMTMIPFLVIFSIFSGIIGAFCTCWFGGVMNAEDLAYGLQYSFQE 188

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             ++   IK+ F A  I  V+   G+ V   S ++GK  T  VV S  +++  D +    
Sbjct: 189 WFVWCSFIKSIFFAFIISSVSAYFGYTVEGGSIAVGKASTDSVVMSSVLILFSDLVLTQL 248

Query: 368 YFA 370
              
Sbjct: 249 LMG 251


>gi|209543397|ref|YP_002275626.1| hypothetical protein Gdia_1228 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209531074|gb|ACI51011.1| protein of unknown function DUF140 [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 383

 Score =  205 bits (523), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 84/377 (22%), Positives = 157/377 (41%), Gaps = 17/377 (4%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVV----MAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
           +G TV   +GNW +         +       + ++           A+   DT     + 
Sbjct: 17  DGATVIVLSGNWLAQGGQGPGGPIPTFPPDGLRQAAPGRPLTFRSDALGRWDTGLIAFLW 76

Query: 60  YFMEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116
              ++    H  ++   +     +L  L+            P               +G 
Sbjct: 77  DLKQRATQAHLDLRTDTLPDSARKLLDLL--------PEAPPPPPTPRPRTFAPVTALGA 128

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
             ++ + +  +   +         E      + +   + L+  +   G S + +V +++F
Sbjct: 129 FTIESLTEIGTVTELGVETARGGLEAVTGRGRMRS--IDLMSNIRDAGPSALLIVSVVNF 186

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
           + GA++A  GA QL +F A+I+   L+ I  +RE+  ++TA+++AGR+G A  A I +M+
Sbjct: 187 LVGAILAFVGAVQLRKFAADIYVASLVGIAMVREMSAVMTAIIMAGRTGGAYAARIATMQ 246

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
            NEEIDA+   G+     LI P I  L+ ++P L +      ++G   V      +  A 
Sbjct: 247 GNEEIDALTVFGIPVSSYLILPSILGLVATMPFLYLYGCLIGMLGGFTVAISMLAVTGAG 306

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +F +  +   L     G IK+ F A  IG+ + + G   G  +  +G   T  VV  I  
Sbjct: 307 YFHQTINAVGLNQFEFGFIKSIFFAILIGLTSCRIGLRSGRSAADVGVAATRAVVVGIVG 366

Query: 357 VIIIDSLFAIFYFAIGI 373
           VI +D++FA+    +GI
Sbjct: 367 VITLDAIFAVIATTLGI 383


>gi|261880035|ref|ZP_06006462.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Prevotella bergensis DSM 17361]
 gi|270333275|gb|EFA44061.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Prevotella bergensis DSM 17361]
          Length = 252

 Score =  205 bits (523), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 59/241 (24%), Positives = 111/241 (46%), Gaps = 1/241 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
               G  +   G   +   + + FL   +++M  +GV  + +V+LISF  GAVI  Q   
Sbjct: 11  LTTFGNYLILMGRAFSRPERMRMFLKRYVKEMAQLGVDSIGIVLLISFFIGAVICIQMKV 70

Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +       +        + L E    +  +++AG+ GS I +E+G+M++ ++IDA+  M
Sbjct: 71  NIQSPWMPRWVTGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALDIM 130

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    LI P+I  L+  +P L I ++   I+GA    +    +  A   +  + +   
Sbjct: 131 GINSASYLILPKIAGLVTIMPFLVIFSSAMGIVGAYATAYIGQLMSPADLTAGMNHSFNE 190

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             ++  +IK+ F A  I  V+   G++V   S  +G+  T  VV S  +++  D      
Sbjct: 191 WYMWMSIIKSLFFAFIIASVSSYFGYSVKGGSVDVGEASTDAVVSSSVLILFSDVFLTQL 250

Query: 368 Y 368
            
Sbjct: 251 L 251


>gi|307564910|ref|ZP_07627431.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A]
 gi|307346383|gb|EFN91699.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A]
          Length = 248

 Score =  205 bits (523), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 59/245 (24%), Positives = 111/245 (45%), Gaps = 1/245 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
              +    G  +       +   + + F  S +R+M  +GV+ + +V+LISF  GAVI  
Sbjct: 3   IKDRLFSFGEYLMLMKRTFSRPERMRMFFKSYVREMSQLGVNSIGIVLLISFFIGAVICI 62

Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +    ++  + L E    +  ++++G+ GS I +E+GSM++ ++IDA
Sbjct: 63  QIRLNVQSPWMPHWVSGYVTREIMLLEFSSSIMCLILSGKVGSNIASELGSMRVTQQIDA 122

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I  L+  +P L I +    ++GA    +  + I  A        
Sbjct: 123 LEIMGINSASYLILPKILGLMTLMPFLVIFSAAIGMVGAYSTAYIGHVISPADLTEGVQH 182

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                 ++  ++K  F A  I  V+   G++V   S  +GK  T  VV+S  +++  D  
Sbjct: 183 HFNQWFMWMSILKGFFFAFIISSVSSYMGYSVKGGSQEVGKASTDAVVKSSVLILFSDVF 242

Query: 364 FAIFY 368
                
Sbjct: 243 LTQLL 247


>gi|254512036|ref|ZP_05124103.1| membrane protein [Rhodobacteraceae bacterium KLH11]
 gi|221535747|gb|EEE38735.1| membrane protein [Rhodobacteraceae bacterium KLH11]
          Length = 260

 Score =  205 bits (523), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 59/262 (22%), Positives = 117/262 (44%), Gaps = 7/262 (2%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           L   +G+ I+  +      A      +          +  + F ++L+     +G   +P
Sbjct: 6   LLGELGRAILTMLAAFGRVALF---ALDAVSHIFRPPFYPREFGIALLN----IGWLSLP 58

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           VV L +  TG  +A Q     ++F AE     +++I  +RE+G +L  +MIA R  S+I 
Sbjct: 59  VVGLTAIFTGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIA 118

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEI +MK+ E+IDA+ T+    ++ L +PR+ A +I++P+L  + +   I G   V  + 
Sbjct: 119 AEIATMKVTEQIDALVTLSTHPMKYLTAPRVLAALITVPVLVGVGDIIGIAGGYTVATQN 178

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
                A +         + +I + L+K         I+    G   G  +  +G+     
Sbjct: 179 LGFNPAAYLKNTVDFLEMRDIVSSLVKGAAFGVIAAIMGCYYGMNSGRGAQGVGRATKGS 238

Query: 350 VVQSISIVIIIDSLFAIFYFAI 371
           V  +  +++  + +    +F++
Sbjct: 239 VEAAAVLILAANFVLTGVFFSL 260


>gi|33863666|ref|NP_895226.1| putative transporter, membrane component [Prochlorococcus marinus
           str. MIT 9313]
 gi|33635249|emb|CAE21574.1| possible transporter, membrane component [Prochlorococcus marinus
           str. MIT 9313]
          Length = 248

 Score =  205 bits (523), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 64/239 (26%), Positives = 113/239 (47%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  +   G+  A++ + +   + L  Q+   G     +V++     G V   Q A +LS
Sbjct: 10  LGNSLIIGGQAVAATARGRINKVDLFDQLMEAGPGSFLIVLITGLAAGTVFNIQVAAELS 69

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + GA      +++I   REI  LLTA ++ G+  +A  A++G+MK+ E+IDAI  +  + 
Sbjct: 70  RQGAGSTVGGILAIGMAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTEP 129

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A+++  P+  IL    A+    +     Y IP  VF++   +  T  ++ 
Sbjct: 130 VEYLVVPRVIAMVVMAPVQCILFFGIALWSGQVSSTNLYQIPPEVFWNSVRTWLTPDDLP 189

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             LIK+      I ++A   G         +G   T  VV ++  V ++D L     F+
Sbjct: 190 FMLIKSLVFGLQIAVLACGWGLTTRGGPKEVGTSTTGAVVMTLVTVSLMDVLLTQILFS 248


>gi|168022425|ref|XP_001763740.1| ATP-binding cassette transporter, subfamily I, member 14, ABC
           component protein PpABCI14 [Physcomitrella patens subsp.
           patens]
 gi|162684984|gb|EDQ71382.1| ATP-binding cassette transporter, subfamily I, member 14, ABC
           component protein PpABCI14 [Physcomitrella patens subsp.
           patens]
          Length = 263

 Score =  205 bits (523), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 53/237 (22%), Positives = 114/237 (48%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
                 G+    + + +  + + ++Q+  VG   + V +L +   G V   Q   + ++ 
Sbjct: 16  AAFIIAGQVIIRTLRGRIHVRNTLQQLELVGPRSLGVSLLTASFVGMVFTIQFVREFARL 75

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           G       ++++   RE+  ++TA+++AGR GSA  AE+G+M+++E+ D +R +  D V 
Sbjct: 76  GLTRSVGGVLALALARELSPVVTAIIMAGRVGSAFAAELGTMQVSEQTDTLRVLRTDPVD 135

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            L++PR+ A  ++LP+LT +    A+  + ++    Y++   +            ++ + 
Sbjct: 136 YLVTPRVIACCLALPILTTMCFAVAMAASVLLADSVYNVSANIILESAARALQPWDLIST 195

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            IK+      I IV+   G      +  +G+  T+ VV S+  + I D + +  +F 
Sbjct: 196 TIKSVVFGGIISIVSCTWGVTTLGGAKGVGESTTSAVVISLVCIFIADFILSWVFFQ 252


>gi|42524509|ref|NP_969889.1| ABC-type organic solvent resistance transport system permease
           protein [Bdellovibrio bacteriovorus HD100]
 gi|39576718|emb|CAE80882.1| ABC-type organic solvent resistance transport system permease
           protein [Bdellovibrio bacteriovorus HD100]
          Length = 275

 Score =  205 bits (522), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 69/271 (25%), Positives = 129/271 (47%), Gaps = 7/271 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
              L   +G+  +  +++  S     G +I    E     +        +IR M ++G  
Sbjct: 7   LYKLIAGVGRYFMGTLSEVVSST---GKIILFFNESVRLIFAKPSRFAEIIRHMEFIGNQ 63

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++ L    TG  ++ Q       F A       +++   RE+G +LT +++A R+G 
Sbjct: 64  SIGIICLTGGFTGLALSLQLYLGFKLFNAVNMVGPTVALGITRELGPVLTGLIVAARAGG 123

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ A +G+M++NE+IDA+  MG++  + L+SPR+ A  I +PLL  + +F A++G+  + 
Sbjct: 124 AMAARLGTMRVNEQIDALDVMGVNTKQYLVSPRLVAAFICMPLLVAVFDFVAMLGSWFLC 183

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
            K   +  AVF+ +      + +I  GL+K         ++    GF     +  +G+  
Sbjct: 184 VKMVGLDEAVFWQKIADFIEIRHINEGLLKGMVFGIYFALMCTYRGFNTTGGAKGVGEAT 243

Query: 347 TTCVVQSISIVIIIDSLFA----IFYFAIGI 373
              VVQS+  +II+D        +FY  +GI
Sbjct: 244 NQGVVQSMVGIIILDYFATNMIRLFYSLVGI 274


>gi|225164012|ref|ZP_03726299.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Opitutaceae bacterium
           TAV2]
 gi|224801394|gb|EEG19703.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Opitutaceae bacterium
           TAV2]
          Length = 258

 Score =  205 bits (522), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 118/256 (46%), Gaps = 5/256 (1%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +    N +      LG +   TG+   S+   +     + R +Y  G+  VPV++++   
Sbjct: 2   LRTLGNHTLLTIQELGDLAQFTGKAFTSAIGSRKLSRRIFRAIYEQGIRCVPVILIVGLF 61

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG V+  QG   L++FGA      L+S+  +RE+G +LTA+M+ G++GSA+ AE+G  + 
Sbjct: 62  TGLVLGLQGYHVLNRFGASGMLGTLVSLTLVRELGPVLTALMLVGQAGSALAAELGIQRN 121

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
           +E+IDA+ TMG D    LISPR+ A +I  P+ T       + G  +       +   V+
Sbjct: 122 SEQIDALETMGADAHAYLISPRLIAALIVYPIHTAFFCLIGMFGGYLSGSVVLPLEPGVY 181

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV-----HSNSLGKKVTTCVVQ 352
           +S   +     ++    +KA         +    GF          + ++G   T  VV 
Sbjct: 182 WSSIDAAVQGGDVRECFLKAAIFGLLTIAICAHNGFNAHRRRSVTGARAVGASTTRAVVI 241

Query: 353 SISIVIIIDSLFAIFY 368
           S   V+  D +   F 
Sbjct: 242 SCITVLAADYVITSFL 257


>gi|310817867|ref|YP_003950225.1| ABC transporter permease [Stigmatella aurantiaca DW4/3-1]
 gi|309390939|gb|ADO68398.1| ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1]
          Length = 250

 Score =  205 bits (522), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 66/241 (27%), Positives = 121/241 (50%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
              +  +LG +   TG   + + +      +L+    ++GV  +P+ +L S   G VI+ 
Sbjct: 4   VRQRLEVLGAMAMMTGRVFSRAVRPPYDWGALVYHTEFLGVRSMPIALLTSTFAGLVISL 63

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q  F L++FG +     ++ +   RE+  +LTA+ +  R GS + AE+G+M + E++DAI
Sbjct: 64  QFGFFLARFGVQYTVGRVVVLTLFRELAPVLTALTVGARIGSGMAAELGAMTVTEQVDAI 123

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R +G D +R L+ PR+ A ++ +P LT+LA+   +   ++V+   Y I F +FF      
Sbjct: 124 RALGADPLRKLVVPRVLACLLVMPTLTVLADVIGLGAGALVVNMQYAISFDLFFQGALDA 183

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             + +  +G+IK       IG+V   +G  V   +  +G+  T  V  +   V + D   
Sbjct: 184 VLMTDFVSGVIKGAIFGVIIGLVGCFKGLTVEGGTEGVGRATTQTVAITSVSVCLADFFI 243

Query: 365 A 365
            
Sbjct: 244 T 244


>gi|301167973|emb|CBW27559.1| putative membrane protein [Bacteriovorax marinus SJ]
          Length = 292

 Score =  205 bits (522), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 69/267 (25%), Positives = 124/267 (46%), Gaps = 7/267 (2%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
           N  +     IG   ++ +    S    +              Y+FK F      Q Y++G
Sbjct: 32  NQIRKFVEAIGSMTMENVQGLGSICRFIFKFFY---WVFKPPYRFKLF----AEQFYFIG 84

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
              + ++ L    TG V+A Q  F       +     +++I   +E+  +L+ +++AGR+
Sbjct: 85  NKSLFIITLAGSFTGMVMAYQTYFGFKLINVDSLVGSVVAISLAKELAPVLSGLIVAGRA 144

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           G+A+ A+IG+MK+ E++DA+  MG+D  + L  PRI A  +SLP+L+I+  F   +G+ I
Sbjct: 145 GAAMAAQIGTMKVTEQVDALEVMGIDSYQYLAVPRILAATLSLPMLSIVFLFVGNVGSYI 204

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
           V      I   ++ S+      + +I  G+IKA      I ++    GF V   +  +GK
Sbjct: 205 VGTVALLIDETMYLSKLGDFMFVGDIVQGIIKATVFGFVIAVIGTYFGFNVTKGAEGVGK 264

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFAI 371
                VV  +  V+++D     F   +
Sbjct: 265 GTNLAVVWGMISVLVLDYFLTSFLVQV 291


>gi|86159557|ref|YP_466342.1| hypothetical protein Adeh_3136 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85776068|gb|ABC82905.1| protein of unknown function DUF140 [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 386

 Score =  205 bits (522), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 87/374 (23%), Positives = 162/374 (43%), Gaps = 15/374 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
             +G  V   AG W+  +    A DV   ++++    +A+   + +   D+  A  +   
Sbjct: 24  EGDGALVIALAGIWRLADGLPPAADVARELDRTPAPRAAVD-AAGVAAWDSALAVFVHGV 82

Query: 62  MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            +    +   + L+ +   + +L  L+               +       +    +G + 
Sbjct: 83  AQTCRTRGVPLDLRALPAGLARLLDLVREPAAP---------ASRAAPASHGIARLGVRA 133

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           ++      +    +G          A   + +   L L+ Q  + G   +P+V L+SF+ 
Sbjct: 134 LRREERLRAAVAFVGETAIAFARLAARRARLRPQDLWLLVQ--HSGAEALPIVALVSFLV 191

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G ++A  G  QL  FGAE F  D++ I  +R++  L+T V +AGRSG A  A++ +M + 
Sbjct: 192 GIILAFVGITQLRFFGAEAFVADIVGIAIVRDMAALITGVTLAGRSGGAFAAQLATMNVT 251

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           +EIDA+RT+G+  V  L+ PR+ AL   +PLLT+ A+ S I+G ++V       P A + 
Sbjct: 252 QEIDALRTLGISPVEYLVVPRVLALTAMMPLLTLFADASGILGGAMVGTTMLHQPLAGYL 311

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
            +        ++  GL+K       I +     G      +  +G+  T  VV  I  +I
Sbjct: 312 HQTALALVPGDLAGGLVKGATYGLLIALTGAFRGMQAERSAERVGEAATQAVVTGIVAII 371

Query: 359 IIDSLFAIFYFAIG 372
               ++   +F  G
Sbjct: 372 SACGVYQYVFFLFG 385


>gi|212690525|ref|ZP_03298653.1| hypothetical protein BACDOR_00007 [Bacteroides dorei DSM 17855]
 gi|212666874|gb|EEB27446.1| hypothetical protein BACDOR_00007 [Bacteroides dorei DSM 17855]
          Length = 248

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 67/243 (27%), Positives = 112/243 (46%), Gaps = 1/243 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G  I   G   A   + + F    + +M  +GV+ + +V+LISF  GAVI  Q   
Sbjct: 6   ITTVGKYIMLMGRTFARPERMRMFFKQYLNEMVQLGVNSIGIVLLISFFIGAVITIQIKL 65

Query: 189 QLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +       F +   +  + L E    +  +++AG+ GS I +EIG+M++ ++IDA+  M
Sbjct: 66  NIESPWMPRFVVGYTTREIMLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALEIM 125

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    LI P+I AL+  +P L I + FS IIGA    W    +           +   
Sbjct: 126 GVNSAGYLILPKIIALMTMIPFLVIFSIFSGIIGAFCTCWFGGVMNAEDLAYGLQYSFQE 185

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             ++   IK+ F A  I  V+   G+ V   S ++GK  T  VV S  +++  D +    
Sbjct: 186 WFVWCSFIKSIFFAFIISSVSAYFGYTVEGGSIAVGKASTDSVVMSSVLILFSDLVLTQL 245

Query: 368 YFA 370
              
Sbjct: 246 LMG 248


>gi|99081621|ref|YP_613775.1| hypothetical protein TM1040_1780 [Ruegeria sp. TM1040]
 gi|99037901|gb|ABF64513.1| protein of unknown function DUF140 [Ruegeria sp. TM1040]
          Length = 260

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 57/250 (22%), Positives = 116/250 (46%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
              S  +   LG +        +   +   +   L   +  VG   +PVV L +  TG  
Sbjct: 11  GRASLGRLAALGRITRFAASTFSHMLRPPFYPRELANALLQVGWLSLPVVALTAIFTGGA 70

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A Q     ++F AE     +++I  +RE+G +L  +MIA R  S+I AEI +M++ E+I
Sbjct: 71  LALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMRVTEQI 130

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+ T+  + ++ L++PR+ A ++++P+L  + +   I+G  +V  +  D   A +    
Sbjct: 131 DALVTLSTNPMKYLVAPRVLAALLTVPVLVGVGDIIGIMGGYVVATETLDFNAAAYLKNT 190

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                L +I + L+K         ++    G   G  +  +G+     V  +  +++  +
Sbjct: 191 VDFLELRDIVSSLVKGAAFGTIAALMGCYYGMQSGRGAQGVGRATKGSVEAAAVLILAAN 250

Query: 362 SLFAIFYFAI 371
            +    +F++
Sbjct: 251 FVLTGVFFSL 260


>gi|51210044|ref|YP_063708.1| conserved hypothetical plastid protein [Gracilaria tenuistipitata
           var. liui]
 gi|50657798|gb|AAT79783.1| conserved hypothetical plastid protein [Gracilaria tenuistipitata
           var. liui]
          Length = 252

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 58/216 (26%), Positives = 107/216 (49%)

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           S++ Q+  VG   + +VI+ +F  G V   Q   +     A      +++I  +RE+  +
Sbjct: 28  SVLEQIKIVGPDSLNIVIITAFFLGMVFTIQIVKEFLYINAAALIGSVLTIAFIRELSPV 87

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           LT+V+I GR  S   AE+ +M + E+++A+  +  + ++ L+ PR+ A I+ LP L I +
Sbjct: 88  LTSVIIVGRIASYFTAELATMSVTEQLNALYLLETNPLKYLVLPRVIACILMLPCLNIFS 147

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
             +++  +S + +  Y I   +FF    S+  + +IF  L+K       I  ++   G  
Sbjct: 148 FITSLFSSSFICFTVYSIHPEIFFVSSFSSLIVQDIFKSLLKTIVFGFLIASISCFWGLK 207

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               +  +GK  T  VV S+  V I D L +   F+
Sbjct: 208 ATGGAKGVGKSTTLSVVTSLLAVFIFDFLLSYIMFS 243


>gi|304383590|ref|ZP_07366049.1| ABC superfamily ATP binding cassette transporter permease protein
           [Prevotella marshii DSM 16973]
 gi|304335114|gb|EFM01385.1| ABC superfamily ATP binding cassette transporter permease protein
           [Prevotella marshii DSM 16973]
          Length = 261

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 61/238 (25%), Positives = 110/238 (46%), Gaps = 1/238 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG  +   G   A   + + FL   + +M  +GV+ + +V+LISF  GAVI  Q   
Sbjct: 20  LTTLGAYLILMGRAVAKPERMRMFLKRYVAEMSALGVNSIGIVLLISFFIGAVICIQMKL 79

Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +       F        + L E    +  +++AG+ GS I +E+G+M++ ++IDA+  M
Sbjct: 80  NIQSPWMPRFVTGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALDIM 139

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    LI P+I  ++  +P L I+++ + I+GA    +  + +               
Sbjct: 140 GVNSACYLILPKIIGMVTIMPFLVIISSATGILGAYATSYIGHVLSPEDLTIGLQHQFNP 199

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
             ++  +IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D    
Sbjct: 200 WFVWMSIIKSLFFAFIISSVSSYFGYTVQGGSVEVGKASTDAVVSSSVLILFSDVFLT 257


>gi|300313364|ref|YP_003777456.1| organic solvents resistance ABC transporter permease
           [Herbaspirillum seropedicae SmR1]
 gi|300076149|gb|ADJ65548.1| ABC-type transport system involved in resistance to organic
           solvents, permease component protein [Herbaspirillum
           seropedicae SmR1]
          Length = 259

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 57/265 (21%), Positives = 131/265 (49%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
              L   +G+ + +F+        +   ++ ++                +  Q++++G  
Sbjct: 2   IAGLVSGLGRSLREFVVGVGFAGRMFASMLGSSLGLLRRP-------RLITDQIHFIGNY 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++ +     G V+  QG + L+++G+E     L+++   RE+G ++TA++ AGR+G+
Sbjct: 55  SLVIIAVSGLFVGFVLGLQGYYTLNKYGSEQALGLLVALSLTRELGPVVTALLFAGRAGT 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           ++ AEIG MK  E++ A+  M ++ ++ +++PR WA +I++P+L  + +   +IG  +V 
Sbjct: 115 SLTAEIGLMKAGEQLSAMEMMAVNPLQRVVAPRFWAGVIAMPVLAAIFSAVGVIGGYVVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                +    F+S+      +  +I  G++K+     A+  VA+ +G+        + + 
Sbjct: 175 VLLIGVDEGAFWSQMQGGVDVWNDIANGVLKSVVFGVAVTFVALFQGYEAKPTPEGVARA 234

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV +  +V+ +D L     F+
Sbjct: 235 TTRTVVIASLLVLGLDFLLTALMFS 259


>gi|58039399|ref|YP_191363.1| ABC transporter permease protein [Gluconobacter oxydans 621H]
 gi|58001813|gb|AAW60707.1| ABC transporter permease protein [Gluconobacter oxydans 621H]
          Length = 261

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 61/266 (22%), Positives = 126/266 (47%), Gaps = 7/266 (2%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
           N+  +    +G+  +  I  + + A      +          + ++ F  SLI      G
Sbjct: 2   NAVLDPIAALGRAALGLIKQAGALAL---FALEALSHLVRPPFYWRIFFSSLIE----TG 54

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
              +PVV L +  +GAVIA Q      Q+  +     ++ +   RE+G +L  +M+AGR 
Sbjct: 55  FFSLPVVALTALFSGAVIALQSYVGFGQYHVQSAIAGIVVLAVTRELGPVLAGLMVAGRV 114

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           G+A+ A+IG+M++ ++IDA+ T+  + ++ L++PR+ A  ++LP L ++A+   ++G   
Sbjct: 115 GAAMSAQIGTMRVTDQIDALTTLSTNPMKYLVTPRLLAGTLALPCLVLVADILGVMGGFT 174

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
           V         + + +    +    ++  GL+KA      I ++    G+     +  +G 
Sbjct: 175 VSVAKLGFSPSTYITATLDSLKTMDVVVGLVKAAVFGFLIALLGCYNGYNSRGGAEGVGS 234

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370
             T  VV +  ++++ D L    +F+
Sbjct: 235 ATTAAVVGASILLLLFDYLLTDLFFS 260


>gi|300728342|ref|ZP_07061707.1| conserved hypothetical protein [Prevotella bryantii B14]
 gi|299774407|gb|EFI71034.1| conserved hypothetical protein [Prevotella bryantii B14]
          Length = 252

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 62/241 (25%), Positives = 112/241 (46%), Gaps = 1/241 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             +LG  I   G+  +   + + +    I++M  +GV  + +V+LISF  GAVI  Q   
Sbjct: 11  LTVLGTYIQLMGKVFSRPERLRMYSKQYIKEMTQLGVDSIGIVLLISFFIGAVICIQMKL 70

Query: 189 QLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +       +     +  + L E    +  ++++G+ GS I +E+G+M++ ++IDA+  M
Sbjct: 71  NIQSPWMPRWVAGYTTREIMLLEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALDIM 130

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    LI P+I AL+  +P L I ++   I+GA    +    +           +   
Sbjct: 131 GVNSASYLILPKIAALVTIMPFLVIFSSAMGIVGAYGTAYIGQILSPEDLTLGIQHSFNQ 190

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             I+  +IK+ F A  I  V+   G+ V   S  +GK  TT VV S  +++  D      
Sbjct: 191 WFIWMSIIKSLFFAFIISSVSSYFGYTVEGGSVEVGKASTTAVVNSSVLILFSDVFLTQM 250

Query: 368 Y 368
            
Sbjct: 251 L 251


>gi|320007322|gb|ADW02172.1| protein of unknown function DUF140 [Streptomyces flavogriseus ATCC
           33331]
          Length = 282

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 62/247 (25%), Positives = 108/247 (43%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +     G + +       + ++    +   I Q ++V    +    L+S   GAVIA 
Sbjct: 30  LLAPLRQTGQLFALALAVARAIFRRPFQVREFIEQFWFVASVTILPAALVSIPFGAVIAL 89

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      Q GA+ F+     +  +++   L+ A++IAG +GSAI A++GS KI EE+DA+
Sbjct: 90  QVGSLTEQLGAQSFTGGASVLAVIQQASPLIVALLIAGAAGSAICADLGSRKIREELDAM 149

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  V+ L+ PR+ A +    LL  L +    +G               + + F + 
Sbjct: 150 EVMGVSPVQRLVVPRVLATMFVAVLLNGLVSVVGTLGGYFFNVIMQGGTPGAYLASFSAL 209

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A L +++ G +KA       GIVA   G         +G  V   VV +  ++  ++ + 
Sbjct: 210 AQLPDLYVGELKALIFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFAVNMVL 269

Query: 365 AIFYFAI 371
              Y  I
Sbjct: 270 TAIYLQI 276


>gi|158521034|ref|YP_001528904.1| hypothetical protein Dole_1017 [Desulfococcus oleovorans Hxd3]
 gi|158509860|gb|ABW66827.1| protein of unknown function DUF140 [Desulfococcus oleovorans Hxd3]
          Length = 385

 Score =  204 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 88/362 (24%), Positives = 161/362 (44%), Gaps = 2/362 (0%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
                 +G         ++ D+   + +   +    +DL+ IT +D  G   +  F    
Sbjct: 21  GITIHVSGALTIDSHQSLSADLHKILERRQGACPIRLDLADITSVDDFGVLAVENFKSVA 80

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
             K     V     Q   L          N  P  +   +   ++   +G  ++  I   
Sbjct: 81  IQKGCGVVVVQVTGQAQRLFQLFSGIADLNAVPPHASASHGLLDVIPEVGNTVIGGIKRV 140

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            S    +G ++        S   F+  +   I  +   GV  +P++ LI  + G + A  
Sbjct: 141 DSSIAFVGSILFAFMRALFSPRSFR--MADTIELIRRDGVDAIPIIGLIGIIIGLISAFV 198

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            + QL++ G +I+   +++   + EIG ++TA+++AGR+GSA  AEIG+MKI+EE+DA+ 
Sbjct: 199 SSVQLTKLGGDIYIPAMITFAMVAEIGPMMTAIVVAGRTGSAYAAEIGTMKISEEVDALI 258

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           +MG D    L  PRI AL++ LP+LT+ +   A++G  +V     ++    +        
Sbjct: 259 SMGFDPTLFLAIPRITALVVVLPILTVCSVIFALLGGLVVCVTLLNLQMGPYLEGVSDAL 318

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            + ++   L K+   A  I ++    GF V   + S+G   T+ VV  I  +I+ DS+ A
Sbjct: 319 FIDDVLWALAKSGIFALLIAVIGCLRGFQVRGGAASVGGAATSAVVTGIFFIILADSVVA 378

Query: 366 IF 367
           + 
Sbjct: 379 LI 380


>gi|162448883|ref|YP_001611250.1| putative ABC transporter permease protein [Sorangium cellulosum 'So
           ce 56']
 gi|161159465|emb|CAN90770.1| putative ABC transporter permease protein [Sorangium cellulosum 'So
           ce 56']
          Length = 287

 Score =  204 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 68/243 (27%), Positives = 111/243 (45%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
            ++      LG     T     S  +    + S + QM  +GV    +  + +   G V+
Sbjct: 35  ENAVGFVEHLGQFGRMTWGALRSMVERPLEIRSTLYQMEALGVRSAAIASVTALFVGMVM 94

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A Q A  L +FG   ++  ++ +   RE+   LTAV++ GR G+ I AE+GSM + E+ID
Sbjct: 95  AVQFAIGLQKFGGMEYTGRIIGLSFSRELAPTLTAVIVGGRIGAGIAAEVGSMAVTEQID 154

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           AIR +G   ++ L+ PR+ A I+ +P+L   A      GA +V    + IP   F     
Sbjct: 155 AIRALGASPLKKLVLPRLLASIVVMPVLGAFALVLGFGGAMLVCATEFGIPAGFFLRTAL 214

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            + T  + F+G+ K PF    I +V    G      +  +G   T  VV +   ++I D 
Sbjct: 215 GSVTFMDYFSGMYKTPFFGAIIALVGCHFGLITRGGTEGVGHATTRTVVVTSITILIADF 274

Query: 363 LFA 365
              
Sbjct: 275 FLT 277


>gi|187734672|ref|YP_001876784.1| protein of unknown function DUF140 [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187424724|gb|ACD04003.1| protein of unknown function DUF140 [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 266

 Score =  204 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 73/262 (27%), Positives = 134/262 (51%), Gaps = 10/262 (3%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           IG+  ++ ++        LG +     +  +  +  +  +  L+ Q+  +GV   PVVI+
Sbjct: 9   IGRAALRLVDR-------LGSIGLLLYQVASCMWSGQFRMRVLVEQIAKIGVQSQPVVII 61

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
               TGAV+  Q  FQL     E     ++++   RE+G ++T +M+AGR GSA+ AEIG
Sbjct: 62  TGAFTGAVLEAQTLFQLQTVRMETMGGAVVAVGMFRELGPVITGLMLAGRVGSAMAAEIG 121

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           +MK+ E++DA+++M +D V  L+ PRI A++IS+P+L + A    I  A IV    +++ 
Sbjct: 122 TMKVTEQVDALKSMNVDPVDYLVKPRIQAMLISMPILMMEAVLVGIASAYIVSVTAFNVD 181

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
            A +        T+ +I   L+KA      I  ++ +EG      +  +GK     +V +
Sbjct: 182 QAYWMHFMSKFVTMGDIIVALVKALAFGLIISTISCREGLNTTNGAVGVGKSTMQAMVYA 241

Query: 354 ISIVIIIDSLFAIF---YFAIG 372
              ++I + +  +    +F +G
Sbjct: 242 SVALLIANFILTMILNSFFPMG 263


>gi|281356107|ref|ZP_06242600.1| protein of unknown function DUF140 [Victivallis vadensis ATCC
           BAA-548]
 gi|281317476|gb|EFB01497.1| protein of unknown function DUF140 [Victivallis vadensis ATCC
           BAA-548]
          Length = 263

 Score =  204 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 75/242 (30%), Positives = 126/242 (52%), Gaps = 3/242 (1%)

Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190
            +G V S          + +  L   +  +   G   +P+V+LI F+ G V+A  G  QL
Sbjct: 24  FIGRVASAL-PLLRQKRQLR--LKETLYYLDLCGAQSLPLVLLICFLMGGVLAINGQIQL 80

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
           S+FG+EIF +D++    L+E G L+ A++  G++GSA  +EIG+MK++EEI A+ T+G+ 
Sbjct: 81  SKFGSEIFIVDMVGFSVLKEFGPLMVALIATGQAGSAFASEIGTMKVDEEISALETLGIR 140

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
               L+ P++ A++I+LPLLT+  +F+ + G   V      +P A +  R          
Sbjct: 141 PAAYLVLPKLIAMLIALPLLTVFGDFAGLTGGLAVGITVAGLPLAAYVERTLDILDSTTF 200

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             G++K+   A  I +     GF     +  +G+  T  VV SI  V++  +L  + Y  
Sbjct: 201 LLGVLKSFVFAVLITLAGCYCGFRSSGDAQGVGRAATAAVVISILFVVVATALLTVLYSF 260

Query: 371 IG 372
           IG
Sbjct: 261 IG 262


>gi|220907786|ref|YP_002483097.1| hypothetical protein Cyan7425_2378 [Cyanothece sp. PCC 7425]
 gi|219864397|gb|ACL44736.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7425]
          Length = 255

 Score =  204 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 61/234 (26%), Positives = 111/234 (47%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
            +   G+      + +    +L+ Q+  VG   +  V+LI+  TG +   Q   +LSQFG
Sbjct: 21  TLFIFGQVWMRILQRRIHRDNLLEQLAIVGWGSLLAVVLINTFTGVLFTIQTTRELSQFG 80

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
           A+       ++   RE+  +LTA ++ G   SA  AEIG M++ ++IDA+  +  D +  
Sbjct: 81  AKSLVGGAFALGYCRELAPVLTAGLLVGEVSSAFAAEIGEMRVTDQIDALYILHTDPIDY 140

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L+ PR+ +  + LP+LT+LA   A++G ++   K Y IP  VF +   +   + ++   +
Sbjct: 141 LVVPRVLSCCLMLPVLTVLAIGGAMLGGTLAGAKIYGIPPTVFLNSIQAVLEVGDLCGIV 200

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +KA       G+V    G      +  + K     VV    +V   + +  I+ 
Sbjct: 201 LKAFIFGIITGLVGCGWGLTTTGGAKGVSKSTKAAVVNGWILVFFANFVLTIWL 254


>gi|332178184|gb|AEE13873.1| protein of unknown function DUF140 [Thermodesulfobium narugense DSM
           14796]
          Length = 250

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 68/246 (27%), Positives = 120/246 (48%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G +         +    +      + Q + +GV  VP+V + S   G V A 
Sbjct: 4   FIEFFSDVGQLSYLFFRSIVAVLTARFRFFLFLDQCFMIGVESVPIVFITSLFVGMVFAI 63

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q A +   +GA      ++ I  +RE+G ++T V++AGR GSA+ AEIG+MK+ E+IDA+
Sbjct: 64  QTAREFVFYGAGSVVGGVVGIAIIRELGPMITGVVVAGRVGSAMAAEIGTMKVTEQIDAL 123

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            +M +D +  L++PR++A ++ LPLLT++AN + +IG   V   Y  +  + F       
Sbjct: 124 LSMSVDPIFYLVAPRVFACMLMLPLLTVIANLAGVIGGYFVAVYYGGVIPSSFVESVRFL 183

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             + +I   LIKA      I ++    G      +  +G      VV S+ ++ I +   
Sbjct: 184 VKVWDIEASLIKAMIFGSIISLIGTFIGLRTKAGARGVGNSTMLSVVISLILIFIFNYFL 243

Query: 365 AIFYFA 370
           ++  F+
Sbjct: 244 SMVMFS 249


>gi|303270959|ref|XP_003054841.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
 gi|226462815|gb|EEH60093.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
          Length = 251

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 56/223 (25%), Positives = 110/223 (49%)

Query: 147 YKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206
           ++ K  +   I+Q+  VG   + V +L S   G V   Q   + S+ G       L+ + 
Sbjct: 29  WQRKLNMAQTIQQIARVGPDTLGVAMLTSSFVGMVFTIQFCKEFSKVGLTRVIGGLLGLA 88

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
             RE+  ++ A+++AGR GSAI AE+G+M+++E++D +RT+G D V  L++PR+ A  +S
Sbjct: 89  FTRELTPVICAIVLAGRVGSAIAAELGTMQVSEQVDQLRTLGSDPVDYLVAPRVVACALS 148

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326
           LP+L++++    +  + ++    Y I               ++I    +K       I  
Sbjct: 149 LPILSVVSFTIGMAASILLADLRYGISPNAIVDSAAKYLETSDIGVMCVKGLAFGGVIAT 208

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           ++   G      +  +G+  T  VV S+  + ++D   ++ +F
Sbjct: 209 ISCGWGQTTTGGAKGVGESTTASVVISLVAIFVVDFFLSMIFF 251


>gi|325855171|ref|ZP_08171794.1| hypothetical protein HMPREF9303_0352 [Prevotella denticola CRIS
           18C-A]
 gi|327312571|ref|YP_004328008.1| hypothetical protein HMPREF9137_0267 [Prevotella denticola F0289]
 gi|325483908|gb|EGC86852.1| hypothetical protein HMPREF9303_0352 [Prevotella denticola CRIS
           18C-A]
 gi|326944406|gb|AEA20291.1| conserved hypothetical protein [Prevotella denticola F0289]
          Length = 248

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 60/241 (24%), Positives = 110/241 (45%), Gaps = 1/241 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
            +  G  +   G   +   + + FL   +++M  +GV  + +V+LISF  GAVI  Q   
Sbjct: 7   LNTFGNYLILMGRSFSRPERMRMFLKRYVKEMSQLGVDSIGIVLLISFFIGAVICIQIKL 66

Query: 189 QLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +       +    ++  + L E    +  ++++G+ GS I +E+G+M++ ++IDA+  M
Sbjct: 67  NVQSPWMPHWVSGYVTREIMLLEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALEIM 126

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    LI P++  LI  +P L I +  + IIGA    +  + I      +        
Sbjct: 127 GINSASYLILPKMLGLITIMPFLVIFSAATGIIGAYATAYIGHIITPIDLTAGLQHDFNP 186

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             ++  +IK  F A  I  V+   G+ V   S  +GK  T  VV S  +++  D      
Sbjct: 187 WFMWMSIIKGFFFAFIISSVSSYMGYTVKGGSVEVGKASTDAVVCSSVLILFSDVFLTQV 246

Query: 368 Y 368
            
Sbjct: 247 L 247


>gi|124022277|ref|YP_001016584.1| transporter membrane component [Prochlorococcus marinus str. MIT
           9303]
 gi|123962563|gb|ABM77319.1| possible transporter, membrane component [Prochlorococcus marinus
           str. MIT 9303]
          Length = 248

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 61/239 (25%), Positives = 113/239 (47%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  +   G+  A++ + +   + L  Q+   G     +V++     G V   Q A +LS
Sbjct: 10  LGSSLIIGGQAVAATARGRINKVDLFDQLMEAGPGSFLIVLITGLAAGTVFNIQVAAELS 69

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + GA      +++I   REI  LLTA ++ G+  +A  A++G+MK+ E+IDAI  +  + 
Sbjct: 70  RQGAGSTVGGILAIGMAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTEP 129

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A+++  P+  +L    A+    +     Y IP  VF++   +  T  ++ 
Sbjct: 130 VEYLVVPRVIAMVVMAPVQCMLFFGIALWSGQVSSTNLYQIPPEVFWNSVRTWLTPDDMP 189

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             L+K+      I +++   G         +G   T  VV ++  V ++D L     F+
Sbjct: 190 FMLVKSLVFGLQIAVLSCGWGLTTRGGPKEVGTSTTGAVVMTLVTVSLMDVLLTQILFS 248


>gi|282878075|ref|ZP_06286880.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310]
 gi|281299815|gb|EFA92179.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310]
          Length = 250

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 62/245 (25%), Positives = 113/245 (46%), Gaps = 2/245 (0%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           I    +     G  +   G       + + F    +++M  +GV  +P+V+LISF  GAV
Sbjct: 3   IKLLITYLTTFGEYLILMGRTFRRPERMRMFFKRYVKEMCQLGVDSIPLVLLISFFIGAV 62

Query: 182 IAQQGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           I  Q    +       ++   +   + L E       +++AG+ GS I +E+G+M++ ++
Sbjct: 63  ICIQMKVNVQSPWMPRWTTGYVTREIFLLEFASAFMCLILAGKVGSNIASELGTMRVTQQ 122

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+  MG++    LI P+I  LI  +P L I ++ + IIGA    +    +      + 
Sbjct: 123 IDALDIMGVNPASYLILPKIAGLITIMPFLVIFSSVAGIIGAYGTAYS-GVLSPDDLTAG 181

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
           F  +  +  ++  +IK+   A  I  V+   G++V   S  +G+  T  VV S  +V+  
Sbjct: 182 FQYSFNVWFVWMSIIKSIVFAFIIASVSSFYGYSVRGGSVEVGEASTNAVVSSSVLVLFA 241

Query: 361 DSLFA 365
           D    
Sbjct: 242 DVFLT 246


>gi|332107650|gb|EGJ08874.1| hypothetical protein RBXJA2T_01025 [Rubrivivax benzoatilyticus JA2]
          Length = 260

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 58/265 (21%), Positives = 122/265 (46%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
                  IG+  ++++      A+    ++ ++                ++ Q++ +G  
Sbjct: 1   MTAALQFIGRFTLEWLRALGHAAYFFVDLLRHSPAALRR-------FSLVVAQIHAIGNR 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + +++      G V+A Q  + L  +GA      ++++  +RE+G ++ A++ AGR+G+
Sbjct: 54  SLVIILASGMAVGFVLALQMYYALVTYGAAESLGLVVNLSLVRELGPVVAALLFAGRAGT 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           ++ AEIG MK  E++ A+  M +D    +++PR    IIS+PLL  L +   I+GA +V 
Sbjct: 114 SLTAEIGLMKAGEQLAAMELMAIDPRSRVLAPRFLGGIISMPLLAALFSAIGILGAWVVA 173

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                +    F+S   S+  +  ++  G++K+         VA+ +G+        +   
Sbjct: 174 VLLIGVDAGNFWSIMQSSVDVWRDVGNGIVKSFVFGVICTAVALYQGYETQATPEGVAHA 233

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV +   V+ +D L     F+
Sbjct: 234 TTRTVVIASLAVLAMDFLLTALMFS 258


>gi|78213612|ref|YP_382391.1| hypothetical protein Syncc9605_2096 [Synechococcus sp. CC9605]
 gi|78198071|gb|ABB35836.1| Protein of unknown function DUF140 [Synechococcus sp. CC9605]
          Length = 249

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 65/239 (27%), Positives = 115/239 (48%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  +   G+  A++ + +     L+ Q+   G   V +V++IS   G+V   Q A +L+
Sbjct: 10  LGASLLIGGQAVAATLRGRIDRGELLEQLLDAGPGSVLIVLIISVAAGSVFNIQVAAELT 69

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + GA      +++I   REI  LLT+ ++AG+  +A  A++G+MK+ E+IDAI  +  D 
Sbjct: 70  RQGAGSTVGGILAIGLAREIAPLLTSCLLAGKVATAYAAQLGTMKVTEQIDAITMLRTDP 129

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A+++  P+        A+    +     Y+IP AVF++   +     ++ 
Sbjct: 130 VEYLVVPRMIAMVVMAPVQCFFFFLVAVWSGQLTSTALYNIPPAVFWTSVRTWMAPLDLP 189

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             L+KA      I  VA   G         +G   T  VV  + +V ++D +     F 
Sbjct: 190 FMLVKAVVFGMIIATVACGWGLTTRGGPKEVGTSTTGAVVMILILVALMDVVLTQVLFG 248


>gi|189500799|ref|YP_001960269.1| hypothetical protein Cphamn1_1871 [Chlorobium phaeobacteroides BS1]
 gi|189496240|gb|ACE04788.1| protein of unknown function DUF140 [Chlorobium phaeobacteroides
           BS1]
          Length = 264

 Score =  203 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 61/243 (25%), Positives = 115/243 (47%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +      +     +  K + +    + Q    G   +P+V++ S   GA++A 
Sbjct: 17  MKEFFLTMQDFFLFSLRAFITIPKIRRYWRDFLDQAKIAGADSLPIVLVSSIAIGALLAV 76

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           +    L  FGA+       ++  +RE+G L+  +M++ R GS   AE+G+MKI+E+IDA+
Sbjct: 77  EVGNLLEDFGAKTMLGRSTALSVIRELGPLIMGLMLSARYGSRNGAELGAMKISEQIDAL 136

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R  G D V  L+ PR+ A +I    LT +A+FS +  A+++   Y+ I   +F++     
Sbjct: 137 RAFGTDPVAKLVMPRLVAALIMFIPLTAIADFSGLYSAALLAEHYHKIDPGIFWNAVFPR 196

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               +   G +KAP  A  I +V+   GF     +  +G+     +V S  ++++ +   
Sbjct: 197 LVFKDFVVGFLKAPVFAIIITLVSCFNGFIAQGGTAGVGRSTIKGIVVSSGLILVANFYV 256

Query: 365 AIF 367
           +  
Sbjct: 257 SKL 259


>gi|218885146|ref|YP_002434467.1| hypothetical protein DvMF_0038 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218756100|gb|ACL06999.1| protein of unknown function DUF140 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 381

 Score =  203 bits (518), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 85/375 (22%), Positives = 164/375 (43%), Gaps = 9/375 (2%)

Query: 2   SENGITVFRF--AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLS-AITEIDTIGAELI 58
              G T  R   +G W      + A              + ++ ++  + + D+  A  +
Sbjct: 13  GTQGATSLRLAVSGAWNLDAPPDGAARASAMARLREPGVATVILVAEGLGDWDSSLAIFV 72

Query: 59  MYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
              +       + + +S     L + +           +   +   ++   L   IG+ +
Sbjct: 73  AGVVR----ACRERNLSVDTSGLPAGLIRLVDLSFAVPERAGAARGDARSGLLERIGEAV 128

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +       S    +G V              +     L++ M   G + +P+V LIS + 
Sbjct: 129 LALPMPVGSTLDFIGEVAFALYRLARGKADMRR--RDLLQFMSESGSAALPIVSLISMLV 186

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G ++A  GA QL  FGA+I+   L++I  +R +G ++T + +AGR+G++  A +G+M++N
Sbjct: 187 GLILAFVGAVQLRVFGAQIYVASLVAIAMVRVMGAIMTGITMAGRTGASYAAILGTMQVN 246

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE+DA+ TMGL  V  L+ PR+ AL++ LPLLT+ A+   ++G  IV     D+    + 
Sbjct: 247 EEVDALATMGLRPVEQLVLPRLLALVVMLPLLTVYADLMGMLGGFIVGVFMLDLNPMEYL 306

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +      +LAN++ G+         + +     G   G  ++++G   T  VV  I  +I
Sbjct: 307 NATREALSLANLWIGITHGAVFGVVVALCGCYHGMRCGRSASAVGAATTAAVVSGIVSII 366

Query: 359 IIDSLFAIFYFAIGI 373
           +  +   +    +GI
Sbjct: 367 VCTAFITVACEVLGI 381


>gi|111018970|ref|YP_701942.1| ABC transporter permease [Rhodococcus jostii RHA1]
 gi|226361065|ref|YP_002778843.1| YrbE family protein [Rhodococcus opacus B4]
 gi|110818500|gb|ABG93784.1| possible ABC transport system, permease component [Rhodococcus
           jostii RHA1]
 gi|226239550|dbj|BAH49898.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 264

 Score =  203 bits (518), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 58/256 (22%), Positives = 122/256 (47%), Gaps = 5/256 (1%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGE-FCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
            +++ +N + +QA  +  +  +         ++F+ F    I Q +++    +    +++
Sbjct: 7   SVLRPVNGALTQAGNIVELFVDVARNTFKRPFQFREF----IEQAWFIASVTILPTAMVA 62

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              GAV++ Q    + Q GAE F+     +  +++   L+TA+++AG +GSA+ A++G+ 
Sbjct: 63  IPFGAVVSLQTGSLIKQLGAESFTGAASVLAVIQQGSPLVTALLVAGAAGSAVTADLGAR 122

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
            I EEIDA+  +G++ ++ L+ PR+ A+++   LL  L +   I G              
Sbjct: 123 TIREEIDAMEVLGINPIQRLVVPRVLAMVLVAILLNGLVSVVGIAGGYFFNVILQGGNPG 182

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            + + F + A L +I+ G +KA       G++A  +G         +G  V   VV +  
Sbjct: 183 AYLASFSAFAQLPDIWVGELKAAVFGVIAGVIAAYKGLHPKGGPKGVGDAVNQSVVITFL 242

Query: 356 IVIIIDSLFAIFYFAI 371
           ++   + +  + Y  I
Sbjct: 243 LLFFANLILTMVYLQI 258


>gi|288924563|ref|ZP_06418500.1| ABC transporter, permease [Prevotella buccae D17]
 gi|315607425|ref|ZP_07882421.1| ABC superfamily ATP binding cassette transporter permease protein
           [Prevotella buccae ATCC 33574]
 gi|288338350|gb|EFC76699.1| ABC transporter, permease [Prevotella buccae D17]
 gi|315250857|gb|EFU30850.1| ABC superfamily ATP binding cassette transporter permease protein
           [Prevotella buccae ATCC 33574]
          Length = 248

 Score =  203 bits (518), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 58/245 (23%), Positives = 108/245 (44%), Gaps = 1/245 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G  +   G   +   + + F+   +++M  +GV  + +V+LISF  GAVI  
Sbjct: 3   ILKWLTTFGKYLILMGRSFSRPERMRMFMKRYVKEMSQLGVDSIGIVLLISFFIGAVICI 62

Query: 185 QGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +        + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 63  QMKLNIQSPWMPRWVSGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 122

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I  L+  +P L I ++   IIGA    +  + +           
Sbjct: 123 LDIMGVNSAGYLILPKILGLVTIMPFLVIFSSAMGIIGAYATAYVGHILSPDDLTLGLQH 182

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
           +     ++  +IK+ F A  I  V+   G+ V   S  +G+  T  VV S  +++  D  
Sbjct: 183 SFNAWFVWMSIIKSLFFAFIIASVSSYFGYTVEGGSVEVGESSTDAVVCSSVLILFSDVF 242

Query: 364 FAIFY 368
                
Sbjct: 243 LTQVL 247


>gi|288803886|ref|ZP_06409311.1| ABC transporter, permease [Prevotella melaninogenica D18]
 gi|302345895|ref|YP_003814248.1| hypothetical protein HMPREF0659_A6184 [Prevotella melaninogenica
           ATCC 25845]
 gi|288333651|gb|EFC72101.1| ABC transporter, permease [Prevotella melaninogenica D18]
 gi|302149082|gb|ADK95344.1| conserved hypothetical protein [Prevotella melaninogenica ATCC
           25845]
          Length = 248

 Score =  203 bits (518), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 61/241 (25%), Positives = 109/241 (45%), Gaps = 1/241 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
               G  +   G   +   + + FL   +++M  +GV  + +V+LISF  GAVI  Q   
Sbjct: 7   LTTFGNYLILMGRSFSRPERMRMFLKRYVKEMSQLGVDSIGIVLLISFFIGAVICIQIKL 66

Query: 189 QLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +       +    ++  + L E    +  ++++G+ GS I +E+G+M++ ++IDA+  M
Sbjct: 67  NVQSPWMPHWVSGYVTREIMLLEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALEIM 126

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    LI P+I  LI  +P L I +  + IIGA    +  + I      +        
Sbjct: 127 GINSASYLILPKIMGLITIMPFLVIFSAATGIIGAYATAYLAHIITPVDLTAGLQHDFNP 186

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             ++  +IK  F A  I  V+   G+ V   S  +GK  T  VV S  +++  D      
Sbjct: 187 WFMWMSIIKGFFFAFIISSVSSYMGYTVKGGSVEVGKASTDAVVCSSVLILFSDVFLTQM 246

Query: 368 Y 368
            
Sbjct: 247 L 247


>gi|329962630|ref|ZP_08300578.1| hypothetical protein HMPREF9446_02167 [Bacteroides fluxus YIT
           12057]
 gi|328529661|gb|EGF56559.1| hypothetical protein HMPREF9446_02167 [Bacteroides fluxus YIT
           12057]
          Length = 258

 Score =  203 bits (517), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 67/254 (26%), Positives = 119/254 (46%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
            VK++         +G  I   G   A   + + F    I +M  +GV+ + +V+LISF 
Sbjct: 5   AVKYLRVMIKALKTVGRYIMLMGRVFARPERMRMFFRQYINEMEQLGVNSIGIVLLISFF 64

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
            GAVI  Q    +       +++  ++  + L E    +  +++AG+ GS I +E+G+M+
Sbjct: 65  IGAVITIQIKLNIESPFMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           + ++IDA+  MG++    LI P+I A++ ++PL+   + F+ IIGA    W    +    
Sbjct: 125 VTQQIDALEIMGVNSANYLILPKISAMVTTIPLMVTFSIFAGIIGAFCTCWFGGIMSAVD 184

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
                        I+ G+IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +
Sbjct: 185 LEYGLQYMFVEWFIWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVL 244

Query: 357 VIIIDSLFAIFYFA 370
           ++  D +       
Sbjct: 245 ILFSDLILTQLLMG 258


>gi|260590590|ref|ZP_05856048.1| ABC transporter, permease [Prevotella veroralis F0319]
 gi|260537463|gb|EEX20080.1| ABC transporter, permease [Prevotella veroralis F0319]
          Length = 248

 Score =  203 bits (517), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 59/241 (24%), Positives = 109/241 (45%), Gaps = 1/241 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
            +  G  +   G   +   + + F    +++M  +GV  + +V+LISF  GAVI  Q   
Sbjct: 7   LNTFGNYLMLMGRSLSRPERMRMFFKRYLKEMSQLGVDSIGIVLLISFFIGAVICIQIKL 66

Query: 189 QLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +       +    ++  + L E    +  ++++G+ GS I +E+G+M++ ++IDA+  M
Sbjct: 67  NVQSAWMPHWVSGYVTREIMLLEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALEIM 126

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    LI P+I  L+  +P L I +  + IIGA    +  + I      +        
Sbjct: 127 GINSASYLILPKILGLMTIMPFLVIFSAATGIIGAYATAYFAHIITPVDLTAGLQHDFNP 186

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             ++  +IK  F A  I  V+   G+ V   S  +GK  T  VV S  +++  D      
Sbjct: 187 WFMWMSIIKGFFFAFIISSVSSYMGYTVKGGSVEVGKASTDAVVCSSVLILFSDVFLTQM 246

Query: 368 Y 368
            
Sbjct: 247 L 247


>gi|281425287|ref|ZP_06256200.1| hypothetical protein HMPREF0971_02259 [Prevotella oris F0302]
 gi|299141487|ref|ZP_07034623.1| ABC transporter, permease [Prevotella oris C735]
 gi|281400580|gb|EFB31411.1| ABC transporter, permease [Prevotella oris F0302]
 gi|298576823|gb|EFI48693.1| ABC transporter, permease [Prevotella oris C735]
          Length = 252

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 59/248 (23%), Positives = 107/248 (43%), Gaps = 1/248 (0%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                      G  +   G   A   + + F    +++M  +GV  + +V+LISF  GAV
Sbjct: 4   FKLFYKYLTTFGSYLLLMGRSIAVPERMRMFFKRYVKEMSQLGVDSIGIVLLISFFIGAV 63

Query: 182 IAQQGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           I  Q    +       +        + L E    +  +++AG+ GS I +E+G+M++ ++
Sbjct: 64  ICIQMKVNIQSPWMPRWVSGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQ 123

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+  MG++    LI P+I  L+  +P L + ++   I+GA    +  + +        
Sbjct: 124 IDALDIMGVNSANYLILPKILGLVTMMPFLVVFSSALGILGAYSTAYIGHMLSPDDLTLG 183

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
              +     I+  +IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  
Sbjct: 184 IQHSFNAWFIWMSIIKSMFFAFVIASVSSFFGYTVEGGSVEVGKASTDAVVSSSVLILFS 243

Query: 361 DSLFAIFY 368
           D       
Sbjct: 244 DVFLTQLL 251


>gi|189462219|ref|ZP_03011004.1| hypothetical protein BACCOP_02902 [Bacteroides coprocola DSM 17136]
 gi|189431072|gb|EDV00057.1| hypothetical protein BACCOP_02902 [Bacteroides coprocola DSM 17136]
          Length = 246

 Score =  203 bits (516), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 64/241 (26%), Positives = 111/241 (46%), Gaps = 1/241 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG  +   G   A   +F+ +L     +M  +G++ + +V+LISF  GAVI  Q   
Sbjct: 5   ITTLGKYLMLMGRVFARPERFRMYLKQYRNEMAQLGINSIGIVLLISFFIGAVICIQIKL 64

Query: 189 QLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +       F +   +  + L E    +  +++AG+ GS I +EIG+M++ ++IDA+  M
Sbjct: 65  NIESPWMPRFVVGYTTREILLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALDIM 124

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    LI P+I  L+  +PLL   + F+ +IGA    W             F  +   
Sbjct: 125 GVNSASYLILPKILGLMTMIPLLVTFSIFAGVIGAFCTAWFAGITNATDLEYGFQYSFVE 184

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             ++   IK+   A  I  V+   G+ V   S ++GK  T  VV S  +++  D +    
Sbjct: 185 WYVWCSFIKSLVFAFIIASVSAYFGYTVEGGSIAVGKASTDSVVCSSVLILFSDLILTQL 244

Query: 368 Y 368
            
Sbjct: 245 L 245


>gi|183221249|ref|YP_001839245.1| ABC transporter permease [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911340|ref|YP_001962895.1| ABC transporter membrane protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167776016|gb|ABZ94317.1| Membrane protein of an ABC transporter complex [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167779671|gb|ABZ97969.1| ABC-type transport system, permease; putative resistance to organic
           solvant; putative membrane protein [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 258

 Score =  203 bits (516), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 64/247 (25%), Positives = 115/247 (46%), Gaps = 4/247 (1%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
             + +G  +         S++       ++ QM+  GV  + VV ++S  TG ++     
Sbjct: 12  LLYAIGYTVLLLFRAIGQSHQLYFKRREILEQMFIAGVGSLFVVSIVSVFTGMILGLNTG 71

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L  FGAE     L++I   RE+   +T++++A   GSA+ AEIG+MK++EEIDA+  M
Sbjct: 72  LGLRDFGAEGQIGLLLTITLTREMSPFMTSLILAASVGSAMAAEIGTMKVSEEIDALEVM 131

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS----RFHS 303
            +  +R L+ PRI    + +P+L + +    I+G  IV      I    +F     R  S
Sbjct: 132 SISPIRYLVMPRIVGFSLMVPVLCVYSAALGILGGGIVGHFQLGIDIISYFQDVYYRISS 191

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              L +++ GL+K      +I  ++  +G      +  +G+     VV S  +VI    +
Sbjct: 192 VPGLKDLYVGLLKGYVFGLSIATISCSQGLRTEGGAIGVGQTTRKAVVTSFLMVIFSGYV 251

Query: 364 FAIFYFA 370
               ++ 
Sbjct: 252 LTALFYK 258


>gi|116073591|ref|ZP_01470853.1| possible transporter, membrane component [Synechococcus sp. RS9916]
 gi|116068896|gb|EAU74648.1| possible transporter, membrane component [Synechococcus sp. RS9916]
          Length = 248

 Score =  203 bits (516), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 67/239 (28%), Positives = 114/239 (47%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  +   G+  +++ + K   + L  Q+   G     +V++     G+V   Q A +LS
Sbjct: 10  LGSSLLIGGQAVSATARGKINTIDLFDQLMEAGPGSFLIVLITGVAAGSVFNIQVAAELS 69

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
             GA      +++I   REI  LLTA ++ G+  +A  A++G+MK+ E+IDAI  +  D 
Sbjct: 70  GMGAGSTVGGVLAIGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTDP 129

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A+++  P+  +L    AI    I   ++Y+IP AVF++   +     ++ 
Sbjct: 130 VEYLVVPRLIAMVVMAPVQCLLFFAVAIYSGQITSTEFYNIPPAVFWNSVRTWLQPDDLP 189

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             LIKA      I ++A   G         +G   T  VV  +  V ++D L     F 
Sbjct: 190 FMLIKALVFGLQIAVLACGWGLTTSGGPKEVGTSTTGSVVMILVTVALMDVLLTQILFG 248


>gi|116747850|ref|YP_844537.1| hypothetical protein Sfum_0402 [Syntrophobacter fumaroxidans MPOB]
 gi|116696914|gb|ABK16102.1| protein of unknown function DUF140 [Syntrophobacter fumaroxidans
           MPOB]
          Length = 258

 Score =  203 bits (516), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 59/255 (23%), Positives = 120/255 (47%), Gaps = 7/255 (2%)

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
           G++ V  +  +      LG  +   G       K +  L     Q+ ++G   + ++ + 
Sbjct: 11  GRRCVHAVRLAGRSLLFLGEAL---GYGFVPPLKIRRSL----EQIVFIGAKSLIIIFVT 63

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           +  TG V+A +    L     E     L+++  +RE+G +L+A+++ GR+GSA+ AEIG 
Sbjct: 64  ALSTGMVLALEALHMLRGGATENILGALVALSIVRELGPVLSALIVTGRAGSAMTAEIGI 123

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           M++ E+IDA+  M ++ ++ +++P+I A ++S+P+L    +   I+G   V    Y +P 
Sbjct: 124 MRLTEQIDALEMMAVNPIKHVVTPKIVAGVVSMPVLCAFFDVVGILGGYFVGVVIYGVPE 183

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
             FF          ++  GL K+     A+  +    G+     +  + +  T  VV + 
Sbjct: 184 VHFFGGMTKAVAYLDVAGGLFKSAVFGLAMSWICSMMGYGAAATAEGVSRATTNAVVITS 243

Query: 355 SIVIIIDSLFAIFYF 369
             V+++D +      
Sbjct: 244 IAVLVLDYMVTSLLL 258


>gi|317504956|ref|ZP_07962905.1| ABC superfamily ATP binding cassette transporter permease protein
           [Prevotella salivae DSM 15606]
 gi|315663948|gb|EFV03666.1| ABC superfamily ATP binding cassette transporter permease protein
           [Prevotella salivae DSM 15606]
          Length = 252

 Score =  202 bits (515), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 58/245 (23%), Positives = 106/245 (43%), Gaps = 1/245 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +     G  +       A   + + F     ++M  +GV  + +V+LISF  GAVI  
Sbjct: 7   LYNYLTTFGSYLILMWRSLAIPDRMRMFFKRYTKEMSQLGVDSIGIVLLISFFIGAVICI 66

Query: 185 QGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +        + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 67  QMKVNIQSPWMPRWVSGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 126

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I  L+  +P L I ++   I+GA    +  + +           
Sbjct: 127 LDIMGVNSANYLILPKILGLVTMMPFLVIFSSALGILGAYSTAYIGHLLTPDDLTLGIQH 186

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
           +     I+  ++K+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D  
Sbjct: 187 SFNSWFIWMSILKSMFFAFIIASVSSYFGYTVEGGSVEVGKASTDAVVSSSVLILFSDVF 246

Query: 364 FAIFY 368
                
Sbjct: 247 LTQLL 251


>gi|254251295|ref|ZP_04944613.1| hypothetical protein BDAG_00477 [Burkholderia dolosa AUO158]
 gi|124893904|gb|EAY67784.1| hypothetical protein BDAG_00477 [Burkholderia dolosa AUO158]
          Length = 386

 Score =  202 bits (515), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 80/240 (33%), Positives = 131/240 (54%), Gaps = 2/240 (0%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
            VI +                     +Y  G   +P+  L++F+ G V++   A QL  F
Sbjct: 148 RVILDALSVLRRPQTMP--WKETSANVYSAGAQALPITALVAFLIGIVLSYLSAQQLQMF 205

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           GA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R MG+    
Sbjct: 206 GANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVMGIPHGL 265

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            LI PR+ AL +++PLL +  N  A+ G ++       I    F         +AN++ G
Sbjct: 266 RLILPRVLALGVAMPLLVMWTNIVALTGGALAAKMVLGIDVNYFVRSLPGVVPIANLYIG 325

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           L K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI +  +G+
Sbjct: 326 LGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAILFQNVGL 385


>gi|188997595|ref|YP_001931846.1| protein of unknown function DUF140 [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188932662|gb|ACD67292.1| protein of unknown function DUF140 [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 247

 Score =  202 bits (515), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 70/245 (28%), Positives = 124/245 (50%), Gaps = 6/245 (2%)

Query: 129 AHILGLVISNTGE----FCASSYKFKGF--LLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
             ++  +I +TG     F  +   FK F  +  +++ M  +GV+  P+++L  F TG V+
Sbjct: 1   MGVINSLIEHTGNITIFFLRTLLSFKKFPKIKHILKYMEDIGVNAAPLIVLTGFFTGGVL 60

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
             +      +F AE     L+S+   RE+  +L A+++  RSGSAI A IG+M+I E+ID
Sbjct: 61  VVETYPTFHKFNAEFLMGALVSLSLARELSPVLVALLVTARSGSAIAANIGTMRITEQID 120

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  M +D +R L++PRI   I+ +P LT+L+  S +IG        Y I   +++ +  
Sbjct: 121 ALEVMAVDPMRYLVAPRIITAILMVPFLTVLSYTSGVIGGYFTSVYVYGINEYMYWEKLK 180

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L +I  GL K+      +  +    G+     +  +G+  TT VV +  +++I+D 
Sbjct: 181 DFTELKDIMGGLYKSAVFGVILVTITAYFGYITKGGAEGVGRSTTTAVVVASVVILILDY 240

Query: 363 LFAIF 367
                
Sbjct: 241 FLTAL 245


>gi|206890031|ref|YP_002249467.1| toluene tolerance protein Ttg2B [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206741969|gb|ACI21026.1| toluene tolerance protein Ttg2B [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 258

 Score =  202 bits (515), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 64/231 (27%), Positives = 115/231 (49%), Gaps = 1/231 (0%)

Query: 143 CASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDL 202
               ++   +   ++ QM Y G S V +V L+    G  ++ Q + +LS  G ++++  +
Sbjct: 25  IIRLFRKPLYFDDIVEQMEYAGSSSVFIVSLVCLFVGMALSLQLSAELSGLGLKMYTGKI 84

Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
           + I  +REIG L+TA++  GR G+   AEIGSM +  +ID +R  G+D ++ ++ PR+ A
Sbjct: 85  VGIAVIREIGPLVTALVFIGRVGAGQTAEIGSMILGHQIDTLRVYGIDPIKKVVVPRVVA 144

Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322
            ++ LP LTI+ +   + G   +     +   + ++S      T  N+ +G IK      
Sbjct: 145 SVVMLPCLTIIGDLVCLFGGYYIAVFVSNQSGSFYWSSIIKELTFQNVLSGSIKPFIFGY 204

Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-IFYFAIG 372
            I  ++   G      +  L    T  VV SI +VI +D +   I  +A+G
Sbjct: 205 LISCISCFYGLTTRGGAKGLRTSTTKAVVTSIVVVIAMDFVLTRILLYALG 255


>gi|95928284|ref|ZP_01311032.1| protein of unknown function DUF140 [Desulfuromonas acetoxidans DSM
           684]
 gi|95135555|gb|EAT17206.1| protein of unknown function DUF140 [Desulfuromonas acetoxidans DSM
           684]
          Length = 261

 Score =  202 bits (515), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 68/267 (25%), Positives = 135/267 (50%), Gaps = 13/267 (4%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
                +G   + F+  +      L   + +        YK K     ++RQ++++G + +
Sbjct: 2   RFVALLGHHTLHFLETAGRFGMFL---LVSVYSMIKPPYKVKP----IVRQIHFIGANSL 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            V++     TG V+  QG + L++FG+  F    +++  +RE+G +L A+M+ GR+GSAI
Sbjct: 55  FVILFTGLFTGMVLGLQGYYTLAKFGSVGFLGGAVALSLIRELGPVLAALMVIGRAGSAI 114

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AE+G M+ +E+IDA+  M +D +  LI P++ A +I++PLLT + +   I G  ++  +
Sbjct: 115 CAEVGIMRNSEQIDALECMAIDPISYLIVPKLVAGLIAMPLLTAIFDVIGIFGGFMIGVQ 174

Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV------GVHSNSL 342
            +D+    +F   +S+    +I  GL+K+      +  +   +GF +      G  +  +
Sbjct: 175 LFDVSAGSYFQGMYSSVVWLDIEMGLVKSLVFGLLLVWICAAKGFYLHLERGGGFGAEGV 234

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYF 369
            +  T+ VV +   V++ D L +    
Sbjct: 235 SRTTTSAVVLASVSVLVWDYLISAILL 261


>gi|297191126|ref|ZP_06908524.1| ABC transporter integral membrane protein [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|197721750|gb|EDY65658.1| ABC transporter integral membrane protein [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 256

 Score =  202 bits (514), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 65/239 (27%), Positives = 112/239 (46%)

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G + +   +   +  K    +   I+Q ++V    +    L+S   GAVIA Q      Q
Sbjct: 13  GSLFAMGLDVLRTIPKRPFQVREFIQQAWFVASVTILPTALVSIPFGAVIALQIGSLTRQ 72

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
            GA+ FS     +  LRE   ++TA++IAG  G+AI A++G+ KI EEIDA+R +G+D +
Sbjct: 73  LGAQSFSGAASVLAVLREASPIVTALLIAGAGGTAICADLGARKIREEIDAMRVLGIDPI 132

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
             L+ PR+ A ++   LL  L +   + G         +     + + F + A L++++ 
Sbjct: 133 HRLVVPRVLATMLVAVLLNGLVSVVGVAGGYFFNVVLQNGTPGAYLASFTTLAQLSDLWA 192

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
             +KA        IVA  +G         +G  V   VV +  ++ + + +    YF I
Sbjct: 193 AELKALVFGAIAAIVASYKGLTAKGGPKGVGDAVNQSVVITFMLLFVTNFVMTAVYFQI 251


>gi|113954700|ref|YP_731394.1| transporter membrane component [Synechococcus sp. CC9311]
 gi|113882051|gb|ABI47009.1| possible transporter, membrane component [Synechococcus sp. CC9311]
          Length = 248

 Score =  202 bits (514), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 69/242 (28%), Positives = 115/242 (47%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
            + LG  +   G+  +++ K +   + L  Q+   G     +VI+ +   G V   Q   
Sbjct: 7   LNRLGSSLLIGGQAVSATTKGRINTIDLFDQLQEAGPGSFLIVIITALAAGTVFNIQITA 66

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           +L+  GA      +++I   REI  LLTA ++ G+  +A  A++G+MK+ E+IDAI  + 
Sbjct: 67  ELNSMGAGSTVGGVLAIGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLR 126

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
            D V  L+ PR+ A+++  P+  +L    AI  A I     Y IP AVF++   +  T  
Sbjct: 127 TDPVEYLVVPRLIAMVVMAPVQCLLFFGVAIWSAQISSTNLYSIPPAVFWTAVRTWLTPD 186

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           ++   LIKA      IG++A   G      +  +G   T  VV  +  V ++D L     
Sbjct: 187 DLPFMLIKALVFGLQIGVIACGWGMTTKGGAKEVGTSTTGAVVMILVSVALMDVLLTQIL 246

Query: 369 FA 370
           F 
Sbjct: 247 FG 248


>gi|325268715|ref|ZP_08135344.1| ABC superfamily ATP binding cassette transporter permease protein
           [Prevotella multiformis DSM 16608]
 gi|324988959|gb|EGC20913.1| ABC superfamily ATP binding cassette transporter permease protein
           [Prevotella multiformis DSM 16608]
          Length = 248

 Score =  202 bits (514), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 60/241 (24%), Positives = 110/241 (45%), Gaps = 1/241 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
            +  G  +   G   +   + + FL   +++M  +GV  + +V+LISF  GAVI  Q   
Sbjct: 7   LNTFGNYLILMGRSFSRPERMRMFLKRYVKEMSQLGVDSIGIVLLISFFIGAVICIQIKL 66

Query: 189 QLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +       +    ++  + L E    +  ++++G+ GS I +E+G+M++ ++IDA+  M
Sbjct: 67  NVQSPWMPHWVSGYVTREIMLLEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALEIM 126

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    LI P++  LI  +P L I +  + IIGA    +  + I      +        
Sbjct: 127 GINSASYLILPKMLGLITIMPFLVIFSAATGIIGAYATAYIGHIITPIDLTAGLQHDFNA 186

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             ++  +IK  F A  I  V+   G+ V   S  +GK  T  VV S  +++  D      
Sbjct: 187 WFMWMSIIKGFFFAFIISSVSSYMGYTVKGGSVEVGKASTDAVVCSSVLILFSDVFLTQI 246

Query: 368 Y 368
            
Sbjct: 247 L 247


>gi|330991860|ref|ZP_08315809.1| putative ABC transporter permease protein [Gluconacetobacter sp.
           SXCC-1]
 gi|329760881|gb|EGG77376.1| putative ABC transporter permease protein [Gluconacetobacter sp.
           SXCC-1]
          Length = 382

 Score =  202 bits (514), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 79/374 (21%), Positives = 156/374 (41%), Gaps = 14/374 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61
           E   T+   +GNW + E   I       +    +  +   D   +   DT     +    
Sbjct: 20  EANRTLVTLSGNWIAQE-GRIPAFPETGLKDVPRGAALEFDTGRLGRWDTSLISFLWELK 78

Query: 62  --MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
               + H  + +  +     +L  L+     +         +            +G+  +
Sbjct: 79  RSAREAHVDVHIDTLPESAHKLLDLLPEIPPEPAPPTPHHFAP--------VAAVGQFTL 130

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
             +N+    + +                  +   + L+  +   G + + +V +++F+ G
Sbjct: 131 DTLNEIGCVSEMGAAAARGGIAALVGRGMMRT--VDLMSDLAAAGPAALLIVGVVNFLVG 188

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           A++A  G+ +L +F A+I+   L++I  +RE+  ++TA+++AGR+G A  A I +M+ NE
Sbjct: 189 AILAFVGSVELHKFAADIYVASLVAIAMVREMSAVMTAIIMAGRTGGAYAARISTMQANE 248

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDA++  G+     LI P + AL  ++PLL +      ++G  +V +    +    +F 
Sbjct: 249 EIDALQVFGIPVASYLILPSVLALGFTMPLLYLYGCLIGMLGGFVVSFIMLHVSPLGYFH 308

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                  L     G IK+      +G+ + + G   G  +  +G   T  VV  I  VI 
Sbjct: 309 ETLQALPLDQFTFGFIKSLVFGTFVGLTSCRIGLKAGRSAADVGIAATKAVVVGIVGVIA 368

Query: 360 IDSLFAIFYFAIGI 373
           +D++FA+    IGI
Sbjct: 369 LDAVFAVIANVIGI 382


>gi|196231158|ref|ZP_03130018.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428]
 gi|196224988|gb|EDY19498.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428]
          Length = 264

 Score =  202 bits (514), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 74/255 (29%), Positives = 129/255 (50%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +   +    S A +L   +   G+      +          Q    GV  VP+V L+SF
Sbjct: 7   AVRSALQHVSSIAWLLIYTVQEMGDHMLRRRRLPFRPSIFFEQADRTGVGSVPLVALVSF 66

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G  +A      L+ +G E      ++I   RE+G L+T +M+A R G+A  AE+G+M 
Sbjct: 67  FLGLTMALLTGHVLAPYGQETLVPAAVAIGFTRELGPLITGIMVAARVGAAFTAELGTMV 126

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           + EE++AI  MGL  +R+L+SPR+ A  + +P L++++N  A+ G +++    +DIP   
Sbjct: 127 VAEEVEAIEAMGLGPLRLLVSPRVLAAFLLMPCLSVVSNMMALSGGALISRWAFDIPMQG 186

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           F+        + +I  G++K+      IG++A  +G  V   +  +G   T+ VV +I+ 
Sbjct: 187 FWQSSLENLFIRDIVAGVLKSFLFGLLIGLIACYKGLTVRGGAAGVGTATTSSVVTAITT 246

Query: 357 VIIIDSLFAIFYFAI 371
           VI  D++F I   A+
Sbjct: 247 VIGFDTVFNIVLVAL 261


>gi|171058394|ref|YP_001790743.1| hypothetical protein Lcho_1711 [Leptothrix cholodnii SP-6]
 gi|170775839|gb|ACB33978.1| protein of unknown function DUF140 [Leptothrix cholodnii SP-6]
          Length = 369

 Score =  202 bits (514), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 82/374 (21%), Positives = 153/374 (40%), Gaps = 20/374 (5%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            +         G+W         D           +    VD  A+   D   A  +   
Sbjct: 12  QDGAGWTLILRGDW-------CGDAGTRLTPPPAAARQVSVDARALGAWDGGLAAALHQC 64

Query: 62  MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
           +   H +   ++LQ +   +  +  L     R     +                 IG ++
Sbjct: 65  LAPLHQRAVPLQLQDLPPGVRSVLELALSVVRVSAPERAAAPVG--------VAAIGHRL 116

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
                +  + A   G V+   G         +G  + L RQ+   G   VP+V L  F+ 
Sbjct: 117 AISWVECMATAAFFGEVLIALGRLLRGRSDLQG--VDLWRQVDQAGPLSVPIVSLTCFLV 174

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G ++A  G  QL + GA  F  D++++  +RE+  L+T V++AGR G+A  A+IGSM+  
Sbjct: 175 GLMLAYMGGAQLHRIGAPSFIPDVVTVGMVRELAGLMTGVILAGRLGAAFAAQIGSMQAG 234

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+R +G+D +  L+ PR+ AL++  P+L  +     ++         Y +    + 
Sbjct: 235 EEIDALRALGVDPIGYLVLPRLLALLLVAPMLVAIGMLVGVLAGLPAAVAAYGLSPTEYL 294

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
            +  +  T  +++ GL K       + +   +EG   G  + ++G   TT VV+++  ++
Sbjct: 295 HKSAAALTWTHLWIGLFKGMMYLGLVALAGCREGLRAGRDAQAVGAATTTAVVKALVWIV 354

Query: 359 IIDSLFAIFYFAIG 372
                  +   ++G
Sbjct: 355 AAACGSTVVLQSLG 368


>gi|90408209|ref|ZP_01216376.1| hypothetical protein PCNPT3_11414 [Psychromonas sp. CNPT3]
 gi|90310655|gb|EAS38773.1| hypothetical protein PCNPT3_11414 [Psychromonas sp. CNPT3]
          Length = 259

 Score =  202 bits (514), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 68/256 (26%), Positives = 137/256 (53%), Gaps = 4/256 (1%)

Query: 118 IVKFINDSCSQAHILGL-VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           +     +S +   + G   +  T   C   +  K      I Q++ +G+  +P+++    
Sbjct: 6   VSAVGRESLALIQVSGRACLLLTRTLCVKPH--KKLFSLFIVQIFQLGILSLPIILTAGL 63

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V++ QG + L  + AE     ++++  LRE+G +++A++ AGR+GSA+ AEIG M+
Sbjct: 64  FIGMVLSLQGYYVLVAYAAEENLGSMVALSLLRELGPVVSALLFAGRAGSALTAEIGLMQ 123

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  MG+  ++ +++PR+ A +I+LP+LT+L N  AI G  ++   +  I    
Sbjct: 124 STEQLASMEMMGVSPLKRVLAPRLLAGVITLPMLTLLFNVFAIWGGYLIGVHWMGIDAGS 183

Query: 297 FFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S    +    +++  G+IK+   A  I  VA+  G+ V  ++  + +  TT VV S  
Sbjct: 184 FWSVMQGSVDLFSDVGNGIIKSVIFALIITWVALYNGYYVIPNAQGISRSTTTTVVVSSL 243

Query: 356 IVIIIDSLFAIFYFAI 371
           +++ +D +  +F F +
Sbjct: 244 LILAMDFILTVFMFGM 259


>gi|325915573|ref|ZP_08177883.1| hypothetical integral membrane protein [Xanthomonas vesicatoria
           ATCC 35937]
 gi|325538211|gb|EGD09897.1| hypothetical integral membrane protein [Xanthomonas vesicatoria
           ATCC 35937]
          Length = 249

 Score =  202 bits (514), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G     +      S   + F+  L+R++Y VG   +P++ +     G V+  
Sbjct: 3   FVESIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ +GA      L+ +   RE+  +LTA++  GR+GS+I AE+G M+  ++I A+
Sbjct: 63  QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D V   ++PR WA ++++PLLT +    AI G          I    F+S   ++
Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVHVLGIDNGTFWSGLSNS 182

Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +    ++K+        +VA   GF             T  VV +  +V++ + +
Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSIATTRAVVNASLLVLMFNFV 242

Query: 364 FAIFYF 369
            +   F
Sbjct: 243 LSAMLF 248


>gi|297172194|gb|ADI23174.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [uncultured gamma
           proteobacterium HF0770_11A05]
          Length = 220

 Score =  202 bits (514), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 64/215 (29%), Positives = 112/215 (52%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + Q++++GV    VV+L    TG V+  Q   Q  +   +   + + ++   RE+G + T
Sbjct: 1   MEQLHFIGVKSQSVVLLTGAFTGMVMCAQFYIQFHKVKMDSAVMSVXTVXMXRELGAVXT 60

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
            +MIAGR G+A+ A++G+MK+ E+IDA+RT+    V  L++PR+ A++ISLPLLT  A  
Sbjct: 61  XLMIAGRVGAAMAAQLGTMKVTEQIDALRTLATSPVDYLVAPRLLAMLISLPLLTAEAIA 120

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            +++   +V      +     +S         +I+ GLIKA   A  I  VA  +G   G
Sbjct: 121 ISMVSGMLVAVYLLGLDPVFLWSNMVFYTGSVDIWMGLIKAFIFAGIIATVACHKGMHCG 180

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
             +  +GK  T  VV +   +++ +    +    +
Sbjct: 181 QGAEGVGKATTEAVVAASISILVSNFFVTLVLNNL 215


>gi|87123683|ref|ZP_01079533.1| possible transporter, membrane component [Synechococcus sp. RS9917]
 gi|86168252|gb|EAQ69509.1| possible transporter, membrane component [Synechococcus sp. RS9917]
          Length = 248

 Score =  202 bits (514), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 65/239 (27%), Positives = 113/239 (47%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  +   G+  A++ + +   + L  Q+   G     +VI+     G+V   Q A +LS
Sbjct: 10  LGSSLLIGGQAVAATARGRINTIDLFDQLLEAGPGSFLIVIITGIAAGSVFNIQVAAELS 69

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + GA      ++++   REI  LLTA ++ G+  +A  A++G+MK+ E+IDAI  +  D 
Sbjct: 70  RQGAGSTVGGILALGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTDP 129

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A+++  P+  +L    AI    I   + Y IP +VF++   +     ++ 
Sbjct: 130 VEYLVVPRLIAMVVMAPVQCLLFFGVAIWSGQITSTELYSIPPSVFWTSVRTWMQPDDLP 189

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             LIKA      I +++   G         +G   T  VV  +  V ++D L     F 
Sbjct: 190 FMLIKALVFGLQIAVLSCGWGLTTEGGPKEVGTSTTGSVVMILVTVALMDVLLTQILFG 248


>gi|42525130|ref|NP_970510.1| ABC-type organic solvent resistance transport system, permease
           protein [Bdellovibrio bacteriovorus HD100]
 gi|39577341|emb|CAE81164.1| ABC-type organic solvent resistance transport system, permease
           protein [Bdellovibrio bacteriovorus HD100]
          Length = 239

 Score =  202 bits (513), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 56/242 (23%), Positives = 114/242 (47%), Gaps = 5/242 (2%)

Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190
           ++ L+           ++ K F     +Q+++VG   + +V+        V   + +F +
Sbjct: 1   MITLIAETLTGVFTPPFRRKEFF----QQLHFVGNKSLFIVVFCVCFAAIVTILESSFHM 56

Query: 191 SQFGA-EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
                 +       ++L LRE+G ++TA++++ R G+   +E+GSM+I E++DA++ +G+
Sbjct: 57  KMVIQNDSMVPGFAAVLILRELGAIVTALLLSSRVGAGYASEVGSMQITEQVDALKMLGI 116

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
           D V  L+ PR  A ++   ++T++AN + I  A  V   Y      +F +         +
Sbjct: 117 DPVNYLVVPRFLACVLGAMMITVVANMACIFSAMAVSQFYLGYTPGMFLTSMQRFVDFKD 176

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           +   +IK       I +VA   GF     +  +G+  T  VV S   +I+ID + +  + 
Sbjct: 177 LIFAMIKGACFGGVIPLVACYFGFRCQQGAEGVGRATTNTVVVSSIAIIVIDFILSYTFS 236

Query: 370 AI 371
            +
Sbjct: 237 YL 238


>gi|150003041|ref|YP_001297785.1| hypothetical protein BVU_0448 [Bacteroides vulgatus ATCC 8482]
 gi|254883679|ref|ZP_05256389.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|294775665|ref|ZP_06741173.1| putative membrane protein [Bacteroides vulgatus PC510]
 gi|149931465|gb|ABR38163.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
 gi|254836472|gb|EET16781.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|294450509|gb|EFG19001.1| putative membrane protein [Bacteroides vulgatus PC510]
          Length = 255

 Score =  202 bits (513), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 65/243 (26%), Positives = 110/243 (45%), Gaps = 1/243 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G  I   G   A   +   F    + +M  +GV+ + +V+LISF  GAVI  Q   
Sbjct: 13  ITTVGKYIMLMGRTFARPERMHMFFKQYLNEMVQLGVNSIGIVLLISFFIGAVITIQIKL 72

Query: 189 QLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +       F +   +  + L E    +  ++++G+ GS I +EIG+M++ ++IDA+  M
Sbjct: 73  NIESPWMPRFVVGYTTREIMLLEFSSSIMCLILSGKVGSNIASEIGTMRVTQQIDALEIM 132

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    LI P+I AL+  +P L I +  S IIGA    W    +           +   
Sbjct: 133 GVNSAGYLILPKIIALMTMIPFLVIFSISSGIIGAFCTCWFGGVMNAEDLAYGLQYSFQE 192

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             ++   IK+ F A  I  V+   G+ V   S ++GK  T  VV S  +++  D +    
Sbjct: 193 WFVWCSFIKSIFFAFIISSVSAYFGYTVEGGSIAVGKASTDSVVMSSVLILFSDLVLTQL 252

Query: 368 YFA 370
              
Sbjct: 253 LMG 255


>gi|318042383|ref|ZP_07974339.1| putative transporter, membrane component [Synechococcus sp. CB0101]
          Length = 261

 Score =  202 bits (513), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 59/239 (24%), Positives = 109/239 (45%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG      G+  A+  K +  +  L+ ++   G     +VI+     G V   Q A +L 
Sbjct: 22  LGESCLIGGQAMAALAKGQVGINDLMAELMEAGPGSFLIVIITGLAAGTVFNIQAASELV 81

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + GA      ++++   REI  +LTA ++ G+  +A  A++G+MK+ E+IDAI  +  D 
Sbjct: 82  KQGAGSTVGGILALGLAREIAPILTATLVTGKVATAYAAQLGTMKVTEQIDAITMLRTDP 141

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V+ L+ PR+ A++I  P+  +     A+    +     Y IP  VF++   +    +++ 
Sbjct: 142 VQYLVVPRVLAMLIMTPVQCLAFFAVAMWSGQVSSTLLYQIPPGVFWNSVRTWMEPSDLP 201

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             L+KA      I +++   G         +G   T  VV  +  V ++D +     F 
Sbjct: 202 AMLLKAVVFGLQIAVISCGWGLTTRGGPKEVGTSTTGAVVMILVTVSLMDVVLTQLLFG 260


>gi|21245052|ref|NP_644634.1| toluene tolerance protein [Xanthomonas axonopodis pv. citri str.
           306]
 gi|294627465|ref|ZP_06706049.1| toluene tolerance protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|294664971|ref|ZP_06730282.1| toluene tolerance protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|21110783|gb|AAM39170.1| toluene tolerance protein [Xanthomonas axonopodis pv. citri str.
           306]
 gi|292598286|gb|EFF42439.1| toluene tolerance protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292605249|gb|EFF48589.1| toluene tolerance protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 249

 Score =  202 bits (513), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G     +      S   + F+  L+R++Y VG   +P++ +     G V+  
Sbjct: 3   FADSIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ +GA      L+ +   RE+  +LTA++  GR+GS+I AE+G M+  ++I A+
Sbjct: 63  QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D V   ++PR WA ++++PLLT +    AI G          I    F+S   ++
Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVHVLGIDNGTFWSGLSNS 182

Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +    ++K+        +VA   GF             T  VV +  +V++ + +
Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242

Query: 364 FAIFYF 369
            +   F
Sbjct: 243 LSAMLF 248


>gi|34540774|ref|NP_905253.1| hypothetical protein PG1033 [Porphyromonas gingivalis W83]
 gi|34397088|gb|AAQ66152.1| conserved hypothetical protein [Porphyromonas gingivalis W83]
          Length = 248

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 63/235 (26%), Positives = 119/235 (50%), Gaps = 1/235 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +G          +   +++     LI+++  +GV  V +VI+ISF  GAVI  Q +
Sbjct: 5   TLQQIGEYTKLMQRTFSLPNRWRMSFRELIKEIDKLGVDSVWIVIIISFFIGAVITIQLS 64

Query: 188 FQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
             ++      F+I   +  + L E    +  +++AG+ GS+I +E+G+M++ E+IDA+  
Sbjct: 65  LNMTSPLIPRFTIGYSTREIILLEFSSTVMCLILAGKVGSSIASELGTMRVTEQIDAMEV 124

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG++    LI P+I   ++ +P+L+I++  + I+G  +      ++P + F        +
Sbjct: 125 MGVNSANYLILPKIIGFMLFVPVLSIISMSTGIVGGYLACSLVPNLPRSDFEYGLQLFFS 184

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
             N+F  +IK+   A  I  VA   G+ V   +  +GK  T  VVQ   +V++ D
Sbjct: 185 PYNVFYSIIKSVAYAFIISSVAGYYGYTVKGGALQVGKASTNAVVQCSILVLVAD 239


>gi|325922508|ref|ZP_08184271.1| conserved hypothetical integral membrane protein [Xanthomonas
           gardneri ATCC 19865]
 gi|325924178|ref|ZP_08185738.1| conserved hypothetical integral membrane protein [Xanthomonas
           gardneri ATCC 19865]
 gi|325545309|gb|EGD16603.1| conserved hypothetical integral membrane protein [Xanthomonas
           gardneri ATCC 19865]
 gi|325547016|gb|EGD18107.1| conserved hypothetical integral membrane protein [Xanthomonas
           gardneri ATCC 19865]
          Length = 249

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G     +      S   + F+  L+R++Y VG   +P++ +     G V+  
Sbjct: 3   MVESIRAFGRAGLFSLTVLRGSVPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ +GA      L+ +   RE+  +LTA++  GR+GS+I AE+G M+  ++I A+
Sbjct: 63  QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D +   ++PR WA ++++PLLT +    AI G          I    F+S   ++
Sbjct: 123 ELMAIDPIAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVHVLGIDNGTFWSGLSNS 182

Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +    ++K+        +VA   GF             T  VV +  +V++ + +
Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSIATTRAVVNASLLVLMFNFV 242

Query: 364 FAIFYF 369
            +   F
Sbjct: 243 LSAMLF 248


>gi|29832444|ref|NP_827078.1| ABC transporter integral membrane protein [Streptomyces avermitilis
           MA-4680]
 gi|29609563|dbj|BAC73613.1| putative ABC transporter permease protein [Streptomyces avermitilis
           MA-4680]
          Length = 256

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 62/239 (25%), Positives = 110/239 (46%)

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G + +   +   +  +        I+Q ++V    +    L+S   GAVIA Q      Q
Sbjct: 13  GSLFAMALDVVRTIPRRPFQAREFIQQAWFVASVTILPTALVSIPFGAVIALQIGSLTRQ 72

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
            GA+ FS     +  LRE   ++TA++IAG  G+AI A++G+ KI EEIDA++ +G+D +
Sbjct: 73  LGAQSFSGAASVLAVLREASPIVTALLIAGAGGTAICADLGARKIREEIDAMQVLGIDPI 132

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
             L+ PR+ A ++   LL  L +   + G         +     + + F + A L++++ 
Sbjct: 133 HRLVVPRVLASMVVAVLLNGLVSVVGVAGGYFFNVVLQNGTPGAYLASFTTLAQLSDLWA 192

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
              KA        IVA  +G         +G  V   VV +  ++ + + +    YF +
Sbjct: 193 AEAKALVFGAIAAIVASYKGLTAKGGPKGVGDAVNQSVVITFMLLFVTNFVMTAVYFQV 251


>gi|282866015|ref|ZP_06275063.1| protein of unknown function DUF140 [Streptomyces sp. ACTE]
 gi|282559054|gb|EFB64608.1| protein of unknown function DUF140 [Streptomyces sp. ACTE]
          Length = 283

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 62/247 (25%), Positives = 106/247 (42%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +     G + +       + +K        + Q ++V    +    L+S   GAVIA 
Sbjct: 31  LLAPLRQTGQLFALALAVARAVFKRPFQFREFVEQFWFVASVTILPAALVSIPFGAVIAL 90

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      Q GA+ F+     +  +++   L+ A++IAG +GSAI A++GS KI EE+DA+
Sbjct: 91  QVGSLTEQLGAQSFTGGASVLAVIQQASPLIVALLIAGAAGSAICADLGSRKIREELDAM 150

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  V+ L+ PR+ A +    LL  L +    +G               + + F + 
Sbjct: 151 EVMGVSPVQRLVVPRVLATMGVAVLLNGLVSVVGTLGGYFFNVIMQGGTPGAYLASFSAL 210

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A L +++ G +KA       GIVA   G         +G  V   VV +  ++  ++   
Sbjct: 211 AQLPDLYIGELKALIFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFAVNMAL 270

Query: 365 AIFYFAI 371
              Y  I
Sbjct: 271 TAIYLQI 277


>gi|166710003|ref|ZP_02241210.1| ABC transporter permease [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 249

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 110/246 (44%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G     +      S   + F+  L+R++Y VG   +P++ +     G V+  
Sbjct: 3   FVDSIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ +GA      L+ +   RE+  +LTA++  GR+GS+I AE+G M+  ++I A+
Sbjct: 63  QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D V   ++PR WA ++++PLLT +    AI G          I    F+S   ++
Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVHVLGIDNGTFWSGLSNS 182

Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             +  +    ++K+        +VA   GF             T  VV +  +V++ + +
Sbjct: 183 VDVWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242

Query: 364 FAIFYF 369
            +   F
Sbjct: 243 LSAMLF 248


>gi|186472351|ref|YP_001859693.1| hypothetical protein Bphy_3498 [Burkholderia phymatum STM815]
 gi|184194683|gb|ACC72647.1| protein of unknown function DUF140 [Burkholderia phymatum STM815]
          Length = 382

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 81/367 (22%), Positives = 160/367 (43%), Gaps = 6/367 (1%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66
           V    G+W +      +   V  I K++ + +  ++ S +   D+     +M   E    
Sbjct: 21  VLHLRGDWITCATGVRSAAEVHEIVKAVGACALRLETSNLGRWDSALIVFLMMLRESVRK 80

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
           G  +   +        +               + +      ++L   +G+   +   ++ 
Sbjct: 81  GGTRPFEIDESDLPHAAQRLLALAAAGSG---EVAGIAAVHRSLATQVGEAYFQAWANAV 137

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           S   ++G    +     A   + +G  + +++ M   G   + +V +++ + GA++A  G
Sbjct: 138 SIVALVGETALHCTAAFAHRVRTRG--VDVLQLMREAGAGALAIVAIVNGLVGAILAFIG 195

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A Q  +FGA I+  +L+ I  +RE+  L TA+++AGR+G A  A + +M+ NEEIDA+  
Sbjct: 196 AVQFQRFGAGIYVANLVGIAVVREMAALATAIVMAGRTGGAYAAHLATMQGNEEIDALNA 255

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +G+     L+ PR+ AL+  +PLL + +    ++   IV     DI    +  +      
Sbjct: 256 VGIPVFDFLVLPRVIALVSMMPLLYVYSCAVGLLSGFIVTLATLDITAVTYLQQLRGAVD 315

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
                 GL K+      + +     G   G  +  +G+  T+ VV  I  VI +D++FA+
Sbjct: 316 GVQFAIGLAKSIAFGSFVALAGCHIGLKAGRSAAEVGRAATSAVVVGIVGVISLDAIFAV 375

Query: 367 FYFAIGI 373
              A+GI
Sbjct: 376 CTNALGI 382


>gi|58579932|ref|YP_198948.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84621937|ref|YP_449309.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|58424526|gb|AAW73563.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84365877|dbj|BAE67035.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 249

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 111/246 (45%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G     +      S   + F+  L+R++Y VG   +P++ +     G V+  
Sbjct: 3   FVDSIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ +GA      L+ +   RE+  +LTA++  GR+GS+I AE+G M+  ++I A+
Sbjct: 63  QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D V   ++PR WA ++++PLLT +    AI G  +       I    F+S   ++
Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYVEAVHVLGIDNGTFWSGLSNS 182

Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             +  +    ++K+        +VA   GF             T  VV +  +V++ + +
Sbjct: 183 VDVWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242

Query: 364 FAIFYF 369
            +   F
Sbjct: 243 LSAMLF 248


>gi|21233625|ref|NP_639542.1| toluene tolerance protein [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66770590|ref|YP_245352.1| toluene tolerance protein [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21115493|gb|AAM43424.1| toluene tolerance protein [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66575922|gb|AAY51332.1| toluene tolerance protein [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 249

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G     +      S   + F+  L+R++Y VG   +P++ +     G V+  
Sbjct: 3   IAESIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ +GA      L+ +   RE+  +LTA++  GR+GS+I AE+G M+  ++I A+
Sbjct: 63  QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D +   ++PR WA ++++PLLT +    AI G          I    F+S   ++
Sbjct: 123 ELMAIDPIAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVHVLGIDNGTFWSGLSNS 182

Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +    ++K+        +VA   GF             T  VV +  +V++ + +
Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSIATTRAVVNASLLVLMFNFV 242

Query: 364 FAIFYF 369
            +   F
Sbjct: 243 LSAMLF 248


>gi|319642184|ref|ZP_07996844.1| hypothetical protein HMPREF9011_02444 [Bacteroides sp. 3_1_40A]
 gi|317386170|gb|EFV67089.1| hypothetical protein HMPREF9011_02444 [Bacteroides sp. 3_1_40A]
          Length = 251

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 65/243 (26%), Positives = 110/243 (45%), Gaps = 1/243 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G  I   G   A   +   F    + +M  +GV+ + +V+LISF  GAVI  Q   
Sbjct: 9   ITTVGKYIMLMGRTFARPERMHMFFKQYLNEMVQLGVNSIGIVLLISFFIGAVITIQIKL 68

Query: 189 QLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +       F +   +  + L E    +  ++++G+ GS I +EIG+M++ ++IDA+  M
Sbjct: 69  NIESPWMPRFVVGYTTREIMLLEFSSSIMCLILSGKVGSNIASEIGTMRVTQQIDALEIM 128

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    LI P+I AL+  +P L I +  S IIGA    W    +           +   
Sbjct: 129 GVNSAGYLILPKIIALMTMIPFLVIFSISSGIIGAFCTCWFGGVMNAEDLAYGLQYSFQE 188

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             ++   IK+ F A  I  V+   G+ V   S ++GK  T  VV S  +++  D +    
Sbjct: 189 WFVWCSFIKSIFFAFIISSVSAYFGYTVEGGSIAVGKASTDSVVMSSVLILFSDLVLTQL 248

Query: 368 YFA 370
              
Sbjct: 249 LMG 251


>gi|289662322|ref|ZP_06483903.1| toluene tolerance protein [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 249

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G     +      S   + F+  L+R++Y VG   +P++ +     G V+  
Sbjct: 3   FADSIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ +GA      L+ +   RE+  +LTA++  GR+GS+I AE+G M+  ++I A+
Sbjct: 63  QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D V   ++PR WA ++++PLLT +    AI G          I    F+S   ++
Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVYVLGIDNGTFWSGLSNS 182

Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +    ++K+        +VA   GF             T  VV +  +V++ + +
Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSIATTRAVVNASLLVLMFNFV 242

Query: 364 FAIFYF 369
            +   F
Sbjct: 243 LSAMLF 248


>gi|86137545|ref|ZP_01056122.1| membrane protein [Roseobacter sp. MED193]
 gi|85825880|gb|EAQ46078.1| membrane protein [Roseobacter sp. MED193]
          Length = 260

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 56/254 (22%), Positives = 115/254 (45%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           + +    + +   ++G V   T    A   +   +   L   +  +G   +PVV L +  
Sbjct: 7   LARLGRSTLAALAMIGRVALFTVSAFAHMLRPPYYPRELALSLLQIGWLSLPVVALTAVF 66

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG  +A Q     ++F AE     +++I  +RE+G +L  +MIA R  S+I AEI +MK+
Sbjct: 67  TGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKV 126

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+ T+  + ++ L++PR+ A ++++P+L  + +   I G   V         A +
Sbjct: 127 TEQIDALVTLSTNPMQYLVAPRVLAALLTVPVLVGIGDIIGIAGGYTVSVHNLGFNSAAY 186

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                      ++ + L+K  F       +    G   G  +  +G    + V  +  ++
Sbjct: 187 LKNTVDFLEPLDLISSLVKGAFFGVIAATMGCYYGMQSGRGAQGVGSATKSSVEAAAVLI 246

Query: 358 IIIDSLFAIFYFAI 371
           +  + +    +F++
Sbjct: 247 LATNFILTGVFFSL 260


>gi|239945573|ref|ZP_04697510.1| putative YrbE family protein [Streptomyces roseosporus NRRL 15998]
 gi|239992040|ref|ZP_04712704.1| putative YrbE family protein [Streptomyces roseosporus NRRL 11379]
          Length = 293

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 4/256 (1%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           ++  + +        +  L ++         ++ + F    I Q ++V    +    L+S
Sbjct: 36  RRPSRLLAPLRETGKLFALAVAVARAIFRRPFQVREF----IEQFWFVASVTILPAALVS 91

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              GAVIA Q      Q GA+ F+     +  +++   L+ A++I+G +GSAI A++GS 
Sbjct: 92  IPFGAVIALQVGSLTQQLGAQSFTGGASVLAVIQQASPLIVALLISGAAGSAICADLGSR 151

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           KI EE+DA+  MG+  ++ L+ PR+ A ++   LL  L +    +G         D    
Sbjct: 152 KIREELDAMEVMGVSPIQRLVVPRVLATMLVAVLLNGLISVVGTLGGYFFNVIMQDGTPG 211

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            + + F + A L +++    KA       GIVA   G         +G  V   VV +  
Sbjct: 212 AYLASFSALAQLPDLYISEFKALIFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFM 271

Query: 356 IVIIIDSLFAIFYFAI 371
           ++  ++ +    Y  I
Sbjct: 272 LLFFVNMVLTAIYLQI 287


>gi|258647414|ref|ZP_05734883.1| ABC transporter, permease [Prevotella tannerae ATCC 51259]
 gi|260852782|gb|EEX72651.1| ABC transporter, permease [Prevotella tannerae ATCC 51259]
          Length = 248

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 61/242 (25%), Positives = 109/242 (45%), Gaps = 1/242 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +  +  G  I   G       +++ F    +++M  +GV  + +V+LISF  GAVI  
Sbjct: 3   ILNFLNSFGRYIELLGRTFQRPERWRMFGKQYLKEMAQLGVDSIGIVLLISFFIGAVICI 62

Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +    ++  + L E    +  ++++G+ GS I +E+G+M+  ++IDA
Sbjct: 63  QIKLNIQSAWMPTWVSGYVTREIMLLEFSSSIMCLILSGKVGSNIASELGTMRTTQQIDA 122

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I  L+  +PLL I +  S I+GA    +  + I      +    
Sbjct: 123 LEIMGVNSASFLILPKILGLVTMIPLLVIFSTASGIVGAYATAYIGHIITATDLTAGMQH 182

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                  + G IK+ F A  I  V+   G+ V   S  +GK  T  VV    +++  D  
Sbjct: 183 DFAPWFFWMGTIKSLFFAFIIASVSSFYGYTVEGGSIEVGKASTNAVVSCSMLILFSDLF 242

Query: 364 FA 365
             
Sbjct: 243 LT 244


>gi|88607911|ref|YP_504642.1| putative ABC transporter, permease protein [Anaplasma
           phagocytophilum HZ]
 gi|88598974|gb|ABD44444.1| putative ABC transporter, permease protein [Anaplasma
           phagocytophilum HZ]
          Length = 244

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 62/237 (26%), Positives = 116/237 (48%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G V     +    S     +L    +Q + V    +P+V + S  TG  +A Q     S
Sbjct: 7   VGRVAIFCVKAVFHSLVPPYYLWITTKQFFEVWFFSLPIVAVTSLFTGGALALQDTLVGS 66

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
              +  F   ++++  +RE+G +L  +++AGR G+A+ AEIG+M+I E+IDA+ T+  D 
Sbjct: 67  AKVSGNFMAGIVTVAIVRELGPVLLGLIVAGRIGAAVAAEIGTMRITEQIDALTTLDTDP 126

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
              LI+PR+ AL++++P+L I A+   + G  +V           +         L ++ 
Sbjct: 127 FHYLIAPRVIALVLAMPVLMIYADILGVFGGFVVGTLGLGYGQEEYLGGVMEFLLLQDVI 186

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
            GL+KA      I +V    G+   + +  +G   T   V +  ++I+++ +  +FY
Sbjct: 187 EGLVKAVSFGLVISLVGCYNGYHCEIGARGVGTATTKTSVAASMLIILLNYIITVFY 243


>gi|325927586|ref|ZP_08188818.1| putative integral membrane protein [Xanthomonas perforans 91-118]
 gi|325542051|gb|EGD13561.1| putative integral membrane protein [Xanthomonas perforans 91-118]
          Length = 249

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 110/246 (44%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G     +      S   + F+  L+R++Y VG   +P++ +     G V+  
Sbjct: 3   FADSIRAFGRAGLFSLTVLRGSLPTRDFMAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ +GA      L+ +   RE+  +LTA++  GR+GS+I AE+G M+  ++I A+
Sbjct: 63  QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D V   ++PR WA ++++PLLT +    AI G          I    F+S   ++
Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVHVLGIDNGTFWSGLSNS 182

Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             +  +    ++K+        +VA   GF             T  VV +  +V++ + +
Sbjct: 183 VDVWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242

Query: 364 FAIFYF 369
            +   F
Sbjct: 243 LSAMLF 248


>gi|254392558|ref|ZP_05007736.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|197706223|gb|EDY52035.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
          Length = 255

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 64/247 (25%), Positives = 110/247 (44%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           S +  H  G   + T E   S ++    L   I Q ++V    +    L+S   GAVIA 
Sbjct: 3   SLASLHETGRFFALTAEIVRSVFRRPFQLREFIEQFWFVASVTILPAALVSIPFGAVIAL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      Q GA+ F+     +  +++   L+ A++IAG  GSAI A++GS KI EE+DA+
Sbjct: 63  QVGSLTQQLGAQSFTGGASVLAVIQQASPLIVALLIAGAGGSAICADLGSRKIREELDAM 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  ++ L+ PR+ A ++   LL  + +    +G         D     + + F + 
Sbjct: 123 EVMGVSPIQRLVVPRVLATMLVAFLLNGMISVVGTLGGYFFNVIMQDGTPGAYLASFSAL 182

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A L +++    KA       G+VA   G         +G  V   VV +  ++  ++ + 
Sbjct: 183 AQLPDLYISEFKALVFGFIAGVVAAHRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMII 242

Query: 365 AIFYFAI 371
              Y  +
Sbjct: 243 TAIYLQV 249


>gi|188993823|ref|YP_001905833.1| putative transporter [Xanthomonas campestris pv. campestris str.
           B100]
 gi|167735583|emb|CAP53801.1| putative transporter [Xanthomonas campestris pv. campestris]
          Length = 249

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G     +      S   + F+  L+R++Y VG   +P++ +     G V+  
Sbjct: 3   IAESIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ +GA      L+ +   RE+  +LTA++  GR+GS+I AE+G M+  ++I A+
Sbjct: 63  QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D V   ++PR WA ++++PLLT +    AI G          I    F+S   ++
Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVHVLGIDNGTFWSGLSNS 182

Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +    ++K+        +VA   GF             T  VV +  +V++ + +
Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSIATTRAVVNASLLVLMFNFV 242

Query: 364 FAIFYF 369
            +   F
Sbjct: 243 LSAMLF 248


>gi|78050007|ref|YP_366182.1| ABC transporter permease [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78038437|emb|CAJ26182.1| ABC transporter permease [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 249

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 110/246 (44%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G     +      S   + F+  L+R++Y VG   +P++ +     G V+  
Sbjct: 3   FADSIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ +GA      L+ +   RE+  +LTA++  GR+GS+I AE+G M+  ++I A+
Sbjct: 63  QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D V   ++PR WA ++++PLLT +    AI G          I    F+S   ++
Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVHVLGIDNGTFWSGLSNS 182

Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             +  +    ++K+        +VA   GF             T  VV +  +V++ + +
Sbjct: 183 VDVWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242

Query: 364 FAIFYF 369
            +   F
Sbjct: 243 LSAMLF 248


>gi|289667685|ref|ZP_06488760.1| toluene tolerance protein [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 249

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G     +      S   + F+  L+R++Y VG   +P++ +     G V+  
Sbjct: 3   FADSVRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ +GA      L+ +   RE+  +LTA++  GR+GS+I AE+G M+  ++I A+
Sbjct: 63  QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D V   ++PR WA ++++PLLT +    AI G          I    F+S   ++
Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVYVLGIDNGTFWSGLSNS 182

Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +    ++K+        +VA   GF             T  VV +  +V++ + +
Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSIATTRAVVNASLLVLMFNFV 242

Query: 364 FAIFYF 369
            +   F
Sbjct: 243 LSAMLF 248


>gi|148240268|ref|YP_001225655.1| ABC-type transport system, permease component [Synechococcus sp. WH
           7803]
 gi|147848807|emb|CAK24358.1| ABC-type transport system, permease component [Synechococcus sp. WH
           7803]
          Length = 257

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 66/242 (27%), Positives = 113/242 (46%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
            + LG  +   G+   ++ + +   + L+ Q+   G     +VI+ S   G V   Q   
Sbjct: 16  LNRLGSSLIIGGQAVTATARGRINTVDLLDQLQEAGPGSFLIVIITSLAAGTVFNIQVTK 75

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           +LS  GA+     ++++   REI  LLTA ++ G+  +A  A++G+MK+ E+IDAI  + 
Sbjct: 76  ELSSMGADATVGGVLAVGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLR 135

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
            D V  L+ PR+ A+++  P+  +L    AI  A I   + Y IP  VF+    S     
Sbjct: 136 TDPVEYLVVPRLIAMVVMAPVQCLLFFGVAIWSAQISSTELYAIPPEVFWMSVRSWLLPD 195

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +I   LIKA      I +++   G         +G   T  VV  +  V ++D++     
Sbjct: 196 DIPFMLIKALVFGLQIAVLSCGWGMTTQGGPKEVGTSTTGAVVMILVTVALMDTVLTQIL 255

Query: 369 FA 370
           F 
Sbjct: 256 FG 257


>gi|318059765|ref|ZP_07978488.1| ABC-transporter integral membrane protein [Streptomyces sp.
           SA3_actG]
 gi|318075809|ref|ZP_07983141.1| ABC-transporter integral membrane protein [Streptomyces sp.
           SA3_actF]
          Length = 287

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 62/239 (25%), Positives = 108/239 (45%)

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G + + T E   + ++        I Q +++    +    L+S   GAVIA Q      Q
Sbjct: 43  GRLFALTLEVLRAIFRRPFQFREFIEQFWFIASVTILPAALVSIPFGAVIALQVGSLTQQ 102

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
            GA+ F+     +  +++   L+ +++IAG  GSAI A++GS KI EE+DA+  MG+  V
Sbjct: 103 LGAQSFTGGASVLAVIQQASPLIVSLLIAGAGGSAICADLGSRKIREELDAMEVMGVSPV 162

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
           + L+ PR+ A +    LL  L +    +G   +           +   F + A L +++ 
Sbjct: 163 QRLVVPRVLATMFVALLLNGLVSVVGTLGGYFLNVGLQHGTPGAYLQSFSALAQLPDLYV 222

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           G +KA       GIVA   G         +G  V   VV +  ++++++      Y  I
Sbjct: 223 GELKALVFGLIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFILLLVVNMAMTAVYLQI 281


>gi|302523371|ref|ZP_07275713.1| ABC-transporter integral membrane protein [Streptomyces sp. SPB78]
 gi|302432266|gb|EFL04082.1| ABC-transporter integral membrane protein [Streptomyces sp. SPB78]
          Length = 253

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 62/247 (25%), Positives = 108/247 (43%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G + + T E   + ++        I Q +++    +    L+S   GAVIA 
Sbjct: 1   MLGPLRQTGRLFALTLEVLRAIFRRPFQFREFIEQFWFIASVTILPAALVSIPFGAVIAL 60

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      Q GA+ F+     +  +++   L+ +++IAG  GSAI A++GS KI EE+DA+
Sbjct: 61  QVGSLTQQLGAQSFTGGASVLAVIQQASPLIVSLLIAGAGGSAICADLGSRKIREELDAM 120

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  V+ L+ PR+ A +    LL  L +    +G   +           +   F + 
Sbjct: 121 EVMGVSPVQRLVVPRVLATMFVALLLNGLVSVVGTLGGYFLNVGLQHGTPGAYLQSFSAL 180

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A L +++ G +KA       GIVA   G         +G  V   VV +  ++++++   
Sbjct: 181 AQLPDLYVGELKALVFGLIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFILLLVVNMAM 240

Query: 365 AIFYFAI 371
              Y  I
Sbjct: 241 TAVYLQI 247


>gi|88807464|ref|ZP_01122976.1| possible transporter, membrane component [Synechococcus sp. WH
           7805]
 gi|88788678|gb|EAR19833.1| possible transporter, membrane component [Synechococcus sp. WH
           7805]
          Length = 257

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 66/242 (27%), Positives = 112/242 (46%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
            + LG  +   G+   ++ + +   + L+ Q+   G     +VI+ S   G V   Q   
Sbjct: 16  LNRLGSSLIIGGQAVTATVRGRINTVDLLDQLQEAGPGSFLIVIITSLAAGTVFNIQVTK 75

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           +LS  GA      ++++   REI  LLTA ++ G+  +A  A++G+MK+ E+IDAI  + 
Sbjct: 76  ELSSMGASATVGGVLAVGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLR 135

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
            D V  L+ PR+ A+++  P+  +L    AI  A     + Y IP  VF+S   S     
Sbjct: 136 TDPVEYLVVPRLIAMVVMAPVQCLLFFGVAIWSAQWSSTELYMIPPQVFWSSVRSWLMPD 195

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +I   LIKA      I +++   G         +G   T  VV  +  V ++D++     
Sbjct: 196 DIPFMLIKALVFGLQIAVLSCGWGMTTAGGPKEVGTSTTGAVVMILVTVALMDTVLTQLL 255

Query: 369 FA 370
           F 
Sbjct: 256 FG 257


>gi|78779806|ref|YP_397918.1| putative transporter, membrane component [Prochlorococcus marinus
           str. MIT 9312]
 gi|78713305|gb|ABB50482.1| Protein of unknown function DUF140 [Prochlorococcus marinus str.
           MIT 9312]
          Length = 251

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 65/254 (25%), Positives = 114/254 (44%), Gaps = 10/254 (3%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           KF     S   I G  I+         ++ K     L  Q+   G   + +V++     G
Sbjct: 5   KFFKRLLSSIMIGGQAINFI-------FRGKISKNDLFEQLMESGPGSLLIVLITGIAAG 57

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V   Q A QL+  G       L+++   RE+  LLTA ++ G+  +A  A++G+MK+ E
Sbjct: 58  TVFNIQVASQLTSMGVSSEIGGLLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTE 117

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +IDAI  +  + ++ L+ PR+ +++I  P+  +L    A+    I    +Y +P  VF++
Sbjct: 118 QIDAITMLRTEPIQYLVVPRLLSMVIMSPIQCLLFLSVALWSGQIWSTIFYKVPPIVFWT 177

Query: 300 RFHS---TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
              S   + T  ++ + LIK+      I I+A   G         +G   T  VV ++  
Sbjct: 178 SVRSGNVSLTSTDLTSMLIKSVVFGLIISIIACGYGLTTKGGPKEVGTSTTGAVVMTLVT 237

Query: 357 VIIIDSLFAIFYFA 370
           V ++D L     F 
Sbjct: 238 VSLMDVLLTQILFG 251


>gi|302551013|ref|ZP_07303355.1| ABC transporter integral membrane protein [Streptomyces
           viridochromogenes DSM 40736]
 gi|302468631|gb|EFL31724.1| ABC transporter integral membrane protein [Streptomyces
           viridochromogenes DSM 40736]
          Length = 256

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 63/239 (26%), Positives = 112/239 (46%)

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G + +   +   +  +        I+Q ++V    +    L+S   GAVIA Q      Q
Sbjct: 13  GSLFAMALDVVRTIPRRPFQAREFIQQAWFVASVTIMPTALVSIPFGAVIALQIGSLTRQ 72

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
            GA+ FS     +  LRE   ++TA++IAG  G+AI A++G+ KI +EIDA++ +G+D V
Sbjct: 73  LGAQSFSGAASVLAVLREASPIVTALLIAGAGGTAICADLGARKIRDEIDAMQVLGIDPV 132

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
             L+ PR+ A ++   LL  L +   + G         +     + + F + A L++++ 
Sbjct: 133 HRLVVPRVLASMLVAVLLNGLVSVVGVAGGYFFNVVLQNGTPGAYLASFTTLAQLSDLWA 192

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
             +KA       GIVA  +G         +G  V   VV +  ++ + + +    YF +
Sbjct: 193 AEVKALVFGAIAGIVASYKGLTAKGGPKGVGDAVNQSVVITFMLLFVTNFVMTAVYFQV 251


>gi|188579086|ref|YP_001916015.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188523538|gb|ACD61483.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 249

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 111/246 (45%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G     +      S   + F+  L+R++Y VG   +P++ +     G V+  
Sbjct: 3   FVDSIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ +GA      L+ +   RE+  +LTA++  GR+GS+I AE+G M+  ++I A+
Sbjct: 63  QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D V   ++PR WA ++++PLLT +    AI G  +       I    F+S   ++
Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYVEAVHVLGIDNGTFWSGLSNS 182

Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             +  +    ++K+        +VA   GF             T  VV +  +V++ + +
Sbjct: 183 VDVWDDFGVAMLKSAIFGGTTALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242

Query: 364 FAIFYF 369
            +   F
Sbjct: 243 LSAMLF 248


>gi|303236789|ref|ZP_07323368.1| conserved hypothetical protein [Prevotella disiens FB035-09AN]
 gi|302482957|gb|EFL45973.1| conserved hypothetical protein [Prevotella disiens FB035-09AN]
          Length = 248

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 62/245 (25%), Positives = 113/245 (46%), Gaps = 1/245 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +     G  +   G   +   +F+ FL   +++M  +GV  + +V+LISF  GAVI  
Sbjct: 3   IINWLTNFGKYLLLMGRTFSRPERFRMFLKQYVKEMSQLGVDSIGIVLLISFFIGAVICI 62

Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +      ++    ++  + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 63  QIKLNVQSPWMPLWVSGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 122

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I  LI  +P L I +    I+GA    +  + I      S    
Sbjct: 123 LEIMGINSASYLILPKIAGLITIMPFLVIFSAAMGIVGAYATAYFAHIITPVDLTSGLQH 182

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
           +     ++  ++K+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D  
Sbjct: 183 SFNSWFMYMSIMKSLFFAFIIASVSSYFGYTVKGGSFDVGKSSTDAVVSSSVLILFSDVF 242

Query: 364 FAIFY 368
                
Sbjct: 243 LTQLL 247


>gi|326775351|ref|ZP_08234616.1| protein of unknown function DUF140 [Streptomyces cf. griseus
           XylebKG-1]
 gi|326655684|gb|EGE40530.1| protein of unknown function DUF140 [Streptomyces cf. griseus
           XylebKG-1]
          Length = 290

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 59/247 (23%), Positives = 108/247 (43%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +     G + +       + ++    +   I Q ++V    +    L+S   GAVIA 
Sbjct: 38  LLAPLRETGKLFALAVAVARAIFRRPFQVREFIEQFWFVASVTILPAALVSIPFGAVIAL 97

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      Q GA+ F+     +  +++   ++ A++I+G +GSAI A++GS KI EE+DA+
Sbjct: 98  QVGSLTQQLGAQSFTGGASVLAVIQQASPIIVALLISGAAGSAICADLGSRKIREELDAM 157

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  ++ L+ PR+ A ++   LL  L +    +G         D     + + F + 
Sbjct: 158 EVMGVSPIQRLVVPRVLATMLVAVLLNGLISVVGTLGGYFFNVIMQDGTPGAYLASFSAL 217

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A L +++    KA       GIVA   G         +G  V   VV +  ++  ++ + 
Sbjct: 218 AQLPDLYISEFKALIFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFFVNMVL 277

Query: 365 AIFYFAI 371
              Y  I
Sbjct: 278 TAIYLQI 284


>gi|182434833|ref|YP_001822552.1| putative YrbE family protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178463349|dbj|BAG17869.1| putative YrbE family protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 290

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 59/247 (23%), Positives = 108/247 (43%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +     G + +       + ++    +   I Q ++V    +    L+S   GAVIA 
Sbjct: 38  LLAPLRETGKLFALAVAVARAIFRRPFQVREFIEQFWFVASVTILPAALVSIPFGAVIAL 97

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      Q GA+ F+     +  +++   ++ A++I+G +GSAI A++GS KI EE+DA+
Sbjct: 98  QVGSLTQQLGAQSFTGGASVLAVIQQASPIIVALLISGAAGSAICADLGSRKIREELDAM 157

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  ++ L+ PR+ A ++   LL  L +    +G         D     + + F + 
Sbjct: 158 EVMGVSPIQRLVVPRVLATMLVAVLLNGLISVVGTLGGYFFNVIMQDGTPGAYLASFSAL 217

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A L +++    KA       GIVA   G         +G  V   VV +  ++  ++ + 
Sbjct: 218 AQLPDLYISEFKALIFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFFVNMVL 277

Query: 365 AIFYFAI 371
              Y  I
Sbjct: 278 TAIYLQI 284


>gi|124026456|ref|YP_001015571.1| putative transporter, membrane component [Prochlorococcus marinus
           str. NATL1A]
 gi|123961524|gb|ABM76307.1| possible transporter, membrane component [Prochlorococcus marinus
           str. NATL1A]
          Length = 249

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 66/239 (27%), Positives = 106/239 (44%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
               I   G+  AS  K       LI Q+   G     +V++     G V   Q A +LS
Sbjct: 11  FFSSILIGGQAIASIAKGNINKSDLIDQLMEAGPGSFLIVLITGIAAGTVFNIQVAAELS 70

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + G       L++I   REI  LLTA ++ G+  +A  A+IG+MK+ E+IDAI  +  D 
Sbjct: 71  KQGLGSAVGGLLAIGMAREIAPLLTATLLTGKVATAYAAQIGTMKVTEQIDAITMLQTDP 130

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A+++  P+  +L    A+          Y IP ++F++        +++ 
Sbjct: 131 VEYLVVPRLCAMVVMAPIQCLLFFSIALFSGQFSSTILYQIPPSIFWNSVREWLITSDLP 190

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             L+KA      I I+A   G         +G   T  VV ++  V ++D L     F 
Sbjct: 191 FMLVKALVFGLLIAIIACGWGLTTRGGPKEVGSSTTGAVVMTLITVSLVDVLLTQVLFG 249


>gi|282880876|ref|ZP_06289569.1| conserved hypothetical protein [Prevotella timonensis CRIS 5C-B1]
 gi|281305258|gb|EFA97325.1| conserved hypothetical protein [Prevotella timonensis CRIS 5C-B1]
          Length = 250

 Score =  200 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 63/246 (25%), Positives = 115/246 (46%), Gaps = 2/246 (0%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
            I    +     G  +   G   +   + + F    I++M  +GV  +P+V+LISF  GA
Sbjct: 2   VIKLIITYLITFGKYLLLMGRTFSRPERMRMFFKQYIKEMTKLGVDSIPLVLLISFFIGA 61

Query: 181 VIAQQGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           VI  Q    +       ++   +   + L E       +++AG+ GS I +E+G+M++ +
Sbjct: 62  VICIQMKINVQSPWMPRWTTGYVTREILLLEFSSAFMCLILAGKIGSNIASELGTMRVTQ 121

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +IDA+  MG++    LI P+I  LI  +P L I ++ + +IGA    +    +  A   +
Sbjct: 122 QIDALDIMGVNPACYLILPKIMGLITIMPFLVIFSSVAGMIGAYATAYS-GVLSPADLTT 180

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
               +  +  I+  +IK+   A  I  V+   GF+V   + ++G+  T  VV S  +V+ 
Sbjct: 181 GLQYSFKVWFIWMSIIKSLVFAFIIASVSSYYGFSVEGGAVAVGEASTNAVVSSSVLVLF 240

Query: 360 IDSLFA 365
            D    
Sbjct: 241 ADVFLT 246


>gi|256380617|ref|YP_003104277.1| hypothetical protein Amir_6634 [Actinosynnema mirum DSM 43827]
 gi|255924920|gb|ACU40431.1| protein of unknown function DUF140 [Actinosynnema mirum DSM 43827]
          Length = 260

 Score =  200 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 62/245 (25%), Positives = 113/245 (46%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
                 G + +  G+  A+S++    +   ++Q +++    V    L+S   GAVIA Q 
Sbjct: 10  GLLRETGRLFALAGQVVAASFRRPFQVREFVQQCWFLVSVTVLPTALVSIPFGAVIALQL 69

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
                Q GA+ F+     +  +++   ++TA++IAG  GSAI A++GS  I EEIDA+  
Sbjct: 70  GSLTRQIGAQSFTGAASVLAIIQQASPIVTALLIAGAGGSAICADLGSRTIREEIDAMEV 129

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +G+  V  L+ PR+ A ++   LL  + +   ++G         D     + + F + A 
Sbjct: 130 LGVSPVHRLVVPRVLAAMVVAVLLNGMVSVVGVMGGYFFNVVLQDGTPGAYLASFSALAQ 189

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L++++ G +KA       GIVA   G         +G  V   VV +  ++   + +   
Sbjct: 190 LSDLWIGELKALVFGFIAGIVAAYRGLNPAGGPKGVGDAVNQAVVVTFLLLFFANFVLTT 249

Query: 367 FYFAI 371
            Y  +
Sbjct: 250 IYLQV 254


>gi|72382734|ref|YP_292089.1| putative transporter, membrane component [Prochlorococcus marinus
           str. NATL2A]
 gi|72002584|gb|AAZ58386.1| Protein of unknown function DUF140 [Prochlorococcus marinus str.
           NATL2A]
          Length = 249

 Score =  200 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 68/239 (28%), Positives = 107/239 (44%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
               I   G+  AS  K       LI Q+   G     +V++     G V   Q A +LS
Sbjct: 11  FFSSILIGGQAIASIAKGNINKSDLIDQLMEAGPGSFLIVLITGIAAGTVFNIQVAAELS 70

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + G       L++I   REI  LLTA ++ G+  +A  A+IG+MK+ E+IDAI  +  D 
Sbjct: 71  KQGLGSAVGGLLAIGMAREIAPLLTATLLTGKVATAYAAQIGTMKVTEQIDAITMLQTDP 130

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PRI A+++  P+  +L    A+          Y IP ++F++        +++ 
Sbjct: 131 VEYLVVPRICAMVVMAPIQCLLFFSIALFSGQFSSTILYQIPPSIFWNSVREWLITSDLP 190

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             L+KA      I I+A   G         +G   T  VV ++  V ++D L     FA
Sbjct: 191 FMLVKALVFGLLIAIIACGWGLTTRGGPKEVGSSTTGAVVMTLITVSLVDVLLTQVLFA 249


>gi|114766131|ref|ZP_01445135.1| membrane protein [Pelagibaca bermudensis HTCC2601]
 gi|114541591|gb|EAU44633.1| membrane protein [Roseovarius sp. HTCC2601]
          Length = 260

 Score =  200 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 57/250 (22%), Positives = 107/250 (42%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
              +      +G V        +   +   +    +  +  +G   +PVV L +  TG  
Sbjct: 11  GRAALGLLAAIGRVALFACAAISHVVRPPVYGREFLNALLQIGWLSLPVVGLTAVFTGGA 70

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A Q     ++F AE     +++I  +RE+G +L  +MIA R  S+I AEI +MK+ E+I
Sbjct: 71  LALQIYSGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQI 130

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+ T+    ++ L+ PR+ A +I +PLL  + +   I G   V         A +    
Sbjct: 131 DALVTLSTHPMKYLVVPRLLAALIVVPLLVAVGDVIGIFGGYFVATGSLGFNPAAYLENT 190

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                  +I + L+K         ++    G   G  +  +G+     V  +  +++  +
Sbjct: 191 VDFLEPLDIVSSLVKGCAFGGIAALMGCFYGMQSGRGAQGVGRATKGSVEAAAVLILAAN 250

Query: 362 SLFAIFYFAI 371
            L    +F+I
Sbjct: 251 FLLTGVFFSI 260


>gi|114564855|ref|YP_752369.1| hypothetical protein Sfri_3703 [Shewanella frigidimarina NCIMB 400]
 gi|114336148|gb|ABI73530.1| protein of unknown function DUF140 [Shewanella frigidimarina NCIMB
           400]
          Length = 264

 Score =  200 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 62/268 (23%), Positives = 121/268 (45%), Gaps = 12/268 (4%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
           N+  N   ++G    K I+        L  ++S+      S          +I+Q+Y++G
Sbjct: 2   NALFNSVSNLGAATRKNIDSIGLATLFLLRIVSSLFTGLVS-------FKQVIKQIYFIG 54

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
              + V+I+ +  TG V+A Q    L +FG+       +++  ++E+G ++TA+M+  R 
Sbjct: 55  NRSLIVIIVAALFTGMVVALQFYDTLVRFGSVDLLGSAVALSLIKELGPVMTALMVIARV 114

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           GSA  +EIG M+  ++ DA+  M ++  R ++ PR+ A +  +P+LT + +   I G  I
Sbjct: 115 GSATCSEIGIMRNEQQFDALDCMAINSYRYVMLPRLLAALFCVPMLTAVFDLVGIGGGYI 174

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG-----VHS 339
           V           +      T +  ++  G IK+      I  + +  GF +      + +
Sbjct: 175 VGVHIQGESPGAYIQGVMDTISFKDVLVGQIKSLVFGLFIMWIPLYYGFYLHLNQKNMGA 234

Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             +    T  VV S  I++  D + +  
Sbjct: 235 EGVSNGTTQAVVMSAIIMLFSDYIVSSL 262


>gi|284034024|ref|YP_003383955.1| hypothetical protein Kfla_6153 [Kribbella flavida DSM 17836]
 gi|283813317|gb|ADB35156.1| protein of unknown function DUF140 [Kribbella flavida DSM 17836]
          Length = 257

 Score =  200 bits (510), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 62/239 (25%), Positives = 112/239 (46%)

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G + +   +   +S +    L   ++Q ++V    +    L++   GAVIA Q    + Q
Sbjct: 13  GSLFAFALDTARASVRRPFQLREFLQQAWFVASVTIIPTALVAIPFGAVIALQVGGLIQQ 72

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
           FGA+ F+     +  +RE   + TA++IAG  GSAI A++GS KI EE+DA+  +G+D +
Sbjct: 73  FGAQAFTGSAAVLAVVREASPIATALLIAGAGGSAICADLGSRKIREELDAMMVLGIDPI 132

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
             L+ PR+ A ++    L    +   ++G  +      D     + + F + A L +++ 
Sbjct: 133 HRLVVPRVLATMLVAFFLNGFVSVVGVMGGYVFNVVLQDGTPGAYIASFTALAHLPDLWQ 192

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           G  KA        +VA  +G   G     +G  V   VV +  ++ + +      YF +
Sbjct: 193 GQAKALVFGFIAAVVASYKGVNAGGGPKGVGDAVNQSVVITFMLLFVANFSMTAIYFQL 251


>gi|329957353|ref|ZP_08297873.1| hypothetical protein HMPREF9445_02751 [Bacteroides clarus YIT
           12056]
 gi|328523066|gb|EGF50169.1| hypothetical protein HMPREF9445_02751 [Bacteroides clarus YIT
           12056]
          Length = 247

 Score =  200 bits (509), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 64/247 (25%), Positives = 115/247 (46%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G  I   G   A   + + F    I ++  +GV+ + +V+LISF  GAVI  
Sbjct: 1   MIKALRTVGRYIMLMGRVFARPERMRMFFRQYINEIEQLGVNSIGIVLLISFFIGAVITI 60

Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +++  ++  + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 61  QIKLNIESPFMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I A++ ++PL+   + F+ IIGA    W    +           
Sbjct: 121 LEIMGVNSANYLILPKIAAMVSTIPLMVTFSIFAGIIGAFCTCWFGGIMSAVDLEYGLQY 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                 I+ G+IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D +
Sbjct: 181 MFVEWFIWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLILFADLI 240

Query: 364 FAIFYFA 370
                  
Sbjct: 241 LTQLLMG 247


>gi|254431004|ref|ZP_05044707.1| ABC-type transport system involved in resistance to organic
           solvents permease component [Cyanobium sp. PCC 7001]
 gi|197625457|gb|EDY38016.1| ABC-type transport system involved in resistance to organic
           solvents permease component [Cyanobium sp. PCC 7001]
          Length = 258

 Score =  200 bits (509), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 59/231 (25%), Positives = 111/231 (48%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G+  ++  + +  L  L++++   G     +V++ +   G V   Q   +LS+ GA    
Sbjct: 28  GQAISAIARGRIGLNDLMQELLEAGPGSFLIVVITALAAGTVFNIQVVAELSKQGANAAV 87

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
             L+++   REI  LLTA ++ G+  +A  A++G+MK+ E+IDAI  +  D V+ L+ PR
Sbjct: 88  GGLLALGLSREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTDPVQYLVVPR 147

Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319
           + A+++  P+  +L     I    +     Y+IP +VF++   +     ++   L+KA  
Sbjct: 148 VLAMVVMAPVQCLLFFGVGIWSGQLSSSLLYNIPPSVFWTSVRTWMQPEDLPFMLVKALV 207

Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               I ++A   G         +G   T  VV  +  V ++D+L     F 
Sbjct: 208 FGLQIAVIACGWGLTTRGGPKEVGTSTTGAVVMILVTVALMDALLTKVLFG 258


>gi|218128442|ref|ZP_03457246.1| hypothetical protein BACEGG_00010 [Bacteroides eggerthii DSM 20697]
 gi|317475731|ref|ZP_07934990.1| hypothetical protein HMPREF1016_01972 [Bacteroides eggerthii
           1_2_48FAA]
 gi|217989333|gb|EEC55646.1| hypothetical protein BACEGG_00010 [Bacteroides eggerthii DSM 20697]
 gi|316908114|gb|EFV29809.1| hypothetical protein HMPREF1016_01972 [Bacteroides eggerthii
           1_2_48FAA]
          Length = 247

 Score =  200 bits (508), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 64/247 (25%), Positives = 115/247 (46%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G  I   G   A   + + F    I ++  +GV+ + +V+LISF  GAVI  
Sbjct: 1   MIKALRTVGKYIMLMGRVFARPERMRMFFRQYINEIEQLGVNSIGIVLLISFFIGAVITI 60

Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +++  ++  + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 61  QIKLNIESPFMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I A++ ++PL+   + F+ IIGA    W    +           
Sbjct: 121 LEIMGVNSANYLILPKIAAMVSTIPLMVTFSIFAGIIGAFCTCWFGGIMSAVDLEYGLQY 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                 I+ G+IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D +
Sbjct: 181 MFVEWFIWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLILFADLI 240

Query: 364 FAIFYFA 370
                  
Sbjct: 241 LTQLLMG 247


>gi|160890565|ref|ZP_02071568.1| hypothetical protein BACUNI_03008 [Bacteroides uniformis ATCC 8492]
 gi|270295705|ref|ZP_06201905.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|317479890|ref|ZP_07939007.1| hypothetical protein HMPREF1007_02124 [Bacteroides sp. 4_1_36]
 gi|156859564|gb|EDO52995.1| hypothetical protein BACUNI_03008 [Bacteroides uniformis ATCC 8492]
 gi|270273109|gb|EFA18971.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|316903964|gb|EFV25801.1| hypothetical protein HMPREF1007_02124 [Bacteroides sp. 4_1_36]
          Length = 247

 Score =  200 bits (508), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 63/244 (25%), Positives = 115/244 (47%), Gaps = 1/244 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +G  I   G   A   + + F    + ++  +GV+ + +V+LISF  GAVI  Q  
Sbjct: 4   ALKTVGRYIILMGRVFARPERMRMFFRQYVNELEQLGVNSIGIVLLISFFIGAVITIQIK 63

Query: 188 FQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
             +       +++  ++  + L E    +  +++AG+ GS I +E+G+M++ ++IDA+  
Sbjct: 64  LNIESPFMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEI 123

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG++    LI P+I A++ ++PL+   + F+ IIGA    W    +              
Sbjct: 124 MGVNSANYLILPKIAAMVTTIPLMVTFSIFAGIIGAFCTCWFGGIMSAVDLEYGLQYMFV 183

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
              I+ G+IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D +   
Sbjct: 184 EWFIWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLILFADLILTQ 243

Query: 367 FYFA 370
               
Sbjct: 244 LLMG 247


>gi|134103293|ref|YP_001108954.1| putative ABC-transporter integral membrane protein
           [Saccharopolyspora erythraea NRRL 2338]
 gi|291004488|ref|ZP_06562461.1| putative ABC-transporter integral membrane protein
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133915916|emb|CAM06029.1| putative ABC-transporter integral membrane protein
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 263

 Score =  200 bits (508), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 56/239 (23%), Positives = 109/239 (45%)

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G + +   +   +  K    +   ++Q +++    +    L++   GAVIA Q      Q
Sbjct: 19  GRLFALMLDVGRALPKRPFQVREFVQQCWFIASVTILPTALVAIPFGAVIALQLGSLTRQ 78

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
            GA+ F+     +  +++   ++TA++IAG  GSAI A++GS KI +EIDA+  +G+  V
Sbjct: 79  IGAQSFTGGASVLAIIQQASPIVTALLIAGAGGSAICADLGSRKIRDEIDAMEVLGVSPV 138

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
             L+ PR+ A ++   LL  + +   ++G               + + F++ A L +I+ 
Sbjct: 139 HRLVVPRVLAAMLVAVLLNGMVSVVGVMGGYFFNVIMQGGTPGAYMASFNALAQLPDIWI 198

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
             +KA       G+VA   G         +G  V   VV +  ++  ++ +    Y  +
Sbjct: 199 SELKALIFGFLAGVVAAYRGLNPPPGPKGVGDAVNQSVVITFLLLFAVNFVLTTIYLQL 257


>gi|319900088|ref|YP_004159816.1| hypothetical protein Bache_0200 [Bacteroides helcogenes P 36-108]
 gi|319415119|gb|ADV42230.1| protein of unknown function DUF140 [Bacteroides helcogenes P
           36-108]
          Length = 247

 Score =  200 bits (508), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 65/247 (26%), Positives = 116/247 (46%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G  I   G   A   + + F    + ++  +GV+ + +V+LISF  GAVI  
Sbjct: 1   MIKALRTVGRYIILMGRVFARPERMRMFFRQYLNEVEQLGVNSIGIVLLISFFIGAVITI 60

Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +++  ++  + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 61  QIKLNIESPFMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I AL+ ++PL+   + F+ IIGA    W    +           
Sbjct: 121 LEIMGVNSANYLILPKISALVTTIPLMVTFSIFAGIIGAFCTCWFGGIMSAVDLEYGLQY 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
           T     I+ G+IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D +
Sbjct: 181 TFVEWFIWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLILFADLI 240

Query: 364 FAIFYFA 370
                  
Sbjct: 241 LTQLLMG 247


>gi|56697513|ref|YP_167881.1| membrane protein [Ruegeria pomeroyi DSS-3]
 gi|56679250|gb|AAV95916.1| membrane protein [Ruegeria pomeroyi DSS-3]
          Length = 260

 Score =  200 bits (508), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 57/245 (23%), Positives = 110/245 (44%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           S     G V     +  +   +   +   L   +  +G   +PVV L +  TG  +A Q 
Sbjct: 16  SVLASFGRVTLFALDAVSHILRPPYYPRELAIALLNIGWLSLPVVGLTAIFTGGALALQI 75

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
               ++F AE     +++I  +RE+G +L  +MIA R  S+I AEI +MK+ E+IDA+ T
Sbjct: 76  YAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQIDALVT 135

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +    ++ L +PR+ A +I++PLL  + +   I+G   V  +      A +         
Sbjct: 136 LSTHPMKYLTAPRVLAALITVPLLVGIGDIIGIMGGYTVAVQNLGFNAAAYLQNTVDFLE 195

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
             ++ + L+K         ++    G   G  +  +G+     V  +  +++  + +   
Sbjct: 196 TRDVVSSLVKGAVFGVIAALMGCYYGMNSGRGAQGVGRATKGSVEAAAVLILAANFVLTG 255

Query: 367 FYFAI 371
            +F+I
Sbjct: 256 VFFSI 260


>gi|160882382|ref|ZP_02063385.1| hypothetical protein BACOVA_00331 [Bacteroides ovatus ATCC 8483]
 gi|237719054|ref|ZP_04549535.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|260172011|ref|ZP_05758423.1| hypothetical protein BacD2_09110 [Bacteroides sp. D2]
 gi|299148138|ref|ZP_07041200.1| putative membrane protein [Bacteroides sp. 3_1_23]
 gi|315920324|ref|ZP_07916564.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|156112195|gb|EDO13940.1| hypothetical protein BACOVA_00331 [Bacteroides ovatus ATCC 8483]
 gi|229451433|gb|EEO57224.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|298512899|gb|EFI36786.1| putative membrane protein [Bacteroides sp. 3_1_23]
 gi|313694199|gb|EFS31034.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 247

 Score =  200 bits (508), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 114/247 (46%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G      G   +   + + F    + ++  +GV+ + +V+LISF  GAVI  
Sbjct: 1   MIKALRTVGRYFMLMGRTFSRPERMRMFFRQYLNELEQLGVNSIGIVLLISFFIGAVITI 60

Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +++  ++  + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 61  QIKLNIESPWMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I A++  +P+L   + F+ IIGA    W    +           
Sbjct: 121 LEIMGINSANYLILPKITAMVTVIPILVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQY 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                 I+ G+IK+ F A  I  V+   G+ V   S ++GK  T  VV S  +++  D +
Sbjct: 181 MFNEWFIWAGIIKSLFFAFIIASVSAFFGYTVEGGSIAVGKASTDAVVSSSVLILFSDLI 240

Query: 364 FAIFYFA 370
                  
Sbjct: 241 LTKLLMG 247


>gi|84502659|ref|ZP_01000778.1| membrane protein [Oceanicola batsensis HTCC2597]
 gi|84389054|gb|EAQ01852.1| membrane protein [Oceanicola batsensis HTCC2597]
          Length = 258

 Score =  199 bits (507), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 60/264 (22%), Positives = 116/264 (43%), Gaps = 7/264 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
              L   IG +++  +      A    + + +        +  + FL +L+     +G  
Sbjct: 1   MTRLLGGIGAQVLAVLAAVGRVAIFAAVTLRH---LVTPPFYGREFLGALLN----IGWL 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PVV L +  TG  +A Q     S+F AE     +++I  +RE+G +L  +MIA R  S
Sbjct: 54  SLPVVGLTAVFTGGALALQIYAGGSRFDAEAVVPQIVAIGMVRELGPVLVGLMIAARVTS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           +I AEI +MK+ E+IDA+ T+    ++ L  PR+ A ++++PLL  + +   I G   V 
Sbjct: 114 SIAAEIATMKVTEQIDALVTLSTHPMKYLTVPRVLAGLVTVPLLVGVGDIIGIFGGYQVA 173

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
            +      A +           ++ + L+K         ++    G   G  +  +G   
Sbjct: 174 VRSLGFNPATYLQNTVDFLEPLDVLSSLVKGAAFGVIATLMGCYSGMNSGRGAQGVGAAT 233

Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370
            + V  +  +++  + L    +F+
Sbjct: 234 KSSVEAASVLILAANFLLTGVFFS 257


>gi|239931478|ref|ZP_04688431.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis
           ATCC 14672]
 gi|291439854|ref|ZP_06579244.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis
           ATCC 14672]
 gi|291342749|gb|EFE69705.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis
           ATCC 14672]
          Length = 254

 Score =  199 bits (507), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 63/247 (25%), Positives = 106/247 (42%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G + +   E   + ++        + Q ++V    +    L+S   GAVIA 
Sbjct: 2   ITGALRQTGRLFALAAEVSRAIFRRPFQFREFVEQFWFVAGVTILPAALVSIPFGAVIAL 61

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      Q GA+ F+     +  +++   L+ A++IAG  GSAI A++GS KI EE+DA+
Sbjct: 62  QVGSLTQQLGAQSFTGGASVLAVVQQASPLIVALLIAGAGGSAICADLGSRKIREELDAM 121

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  V+ L+ PR+ A +    LL  L +    +G         D     + S F + 
Sbjct: 122 EVMGVSPVQRLVVPRVLATMGVAVLLNGLVSVVGTLGGYFFNVVLQDGTPGAYLSSFSAL 181

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A  A+++   +KA       GIVA   G         +G  V   VV +  ++  ++ + 
Sbjct: 182 AQPADLYISELKALVFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMVM 241

Query: 365 AIFYFAI 371
              Y  I
Sbjct: 242 TALYLQI 248


>gi|58040555|ref|YP_192519.1| ABC transporter permease protein [Gluconobacter oxydans 621H]
 gi|58002969|gb|AAW61863.1| ABC transporter permease protein [Gluconobacter oxydans 621H]
          Length = 387

 Score =  199 bits (507), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 83/375 (22%), Positives = 158/375 (42%), Gaps = 15/375 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            E    V   +G W++   +           K           S +   DT     +   
Sbjct: 25  GEQTAPVMVLSGTWQAR--AGNIPVFPKDGLKKAPGAHLSFQTSDLQVWDTGLVAFLWDL 82

Query: 62  MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
               H     + +Q +   + QL  L+     + + ++  +  F           +G   
Sbjct: 83  KRVAHDAGISLDMQTLPGPMRQLLELLPEVPDEPVHHKTARTPF--------LETVGNHA 134

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +  + +    + +    ++  G       + +  ++ L+      G   + +V +++F+ 
Sbjct: 135 IASMTEVGVVSEL--GALTAKGAVLTLLGRSRMRMVDLLANTADAGPYALLIVGIVNFLI 192

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA++A  GA +L +F A I+   L+ I  +RE+  ++TA+++AGR+G A  A I +M+ N
Sbjct: 193 GAILAFVGAVELQKFAAGIYVASLVGIAMVREMAAVMTAIIMAGRTGGAYAARISTMQGN 252

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+   G+     LI P + +LII++P L +      ++G  +V     DI  A +F
Sbjct: 253 EEIDALNVFGIPTSTYLILPAVLSLIITMPFLYLYGCLIGMLGGFVVAISMLDITAAGYF 312

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
            +  +   +     G  K+      IG+ + + G   G  +  +G   T  VV  I  VI
Sbjct: 313 HQTVTAFGIGQFIFGFTKSLVFGAFIGLTSCRIGLKAGRSAADVGIAATRAVVVGIVGVI 372

Query: 359 IIDSLFAIFYFAIGI 373
            ID++FA+    +GI
Sbjct: 373 AIDAIFAVIADVLGI 387


>gi|126728696|ref|ZP_01744511.1| membrane protein [Sagittula stellata E-37]
 gi|126710626|gb|EBA09677.1| membrane protein [Sagittula stellata E-37]
          Length = 260

 Score =  199 bits (507), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 56/251 (22%), Positives = 109/251 (43%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
                      +G V        + + +   +       M  VG   +PVV L +F TGA
Sbjct: 10  LGRALLHWLAAIGRVTRFGLTALSHTLRPPFYAGEFGAAMMNVGWLSLPVVGLTAFFTGA 69

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
            +A Q     ++F AE     +++I  +RE+G +L  +MIA R  S+I AEI +MK+ E+
Sbjct: 70  ALALQIYSGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQ 129

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+ T+  + ++ L++PR+ A ++ +P L  + +   + G   V         A +   
Sbjct: 130 IDALTTLSTNPMKYLVAPRLLAALLVVPALVGIGDVIGVFGGYAVATGSLGFNPAAYLKN 189

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                   ++ + L+K         ++    G   G  +  +G+     V  +  +++  
Sbjct: 190 TVDFLEPLDVISSLVKGCAFGGIAALMGCYFGMMSGRGAQGVGRATKGSVEAAAVLILAA 249

Query: 361 DSLFAIFYFAI 371
           + L    +F++
Sbjct: 250 NFLLTGAFFSL 260


>gi|224535957|ref|ZP_03676496.1| hypothetical protein BACCELL_00821 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522412|gb|EEF91517.1| hypothetical protein BACCELL_00821 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 247

 Score =  199 bits (507), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 65/247 (26%), Positives = 115/247 (46%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G  I   G   A   + + F    I +M  +GV+ + +V+LISF  GAVI  
Sbjct: 1   MIKALKTVGRYIMLMGRTFARPERMRMFFRQYINEMGQLGVNSIGIVLLISFFIGAVITI 60

Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +++  ++  + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 61  QIKLNIESPFMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I+A++ ++P L   + F+ IIGA    W    +           
Sbjct: 121 LEIMGVNSANYLILPKIFAMVTTIPFLVTFSIFAGIIGAFATCWFGGIMSAVDLEYGLQY 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                 I+ G+IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D +
Sbjct: 181 MFVEWFIWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLILFADLI 240

Query: 364 FAIFYFA 370
                  
Sbjct: 241 LTKLLMG 247


>gi|190576453|ref|YP_001974298.1| putative transmembrane component of ABC transporter protein
           [Stenotrophomonas maltophilia K279a]
 gi|254522804|ref|ZP_05134859.1| toluene tolerance protein [Stenotrophomonas sp. SKA14]
 gi|190014375|emb|CAQ48023.1| putative transmembrane component of ABC transporter protein
           [Stenotrophomonas maltophilia K279a]
 gi|219720395|gb|EED38920.1| toluene tolerance protein [Stenotrophomonas sp. SKA14]
          Length = 249

 Score =  199 bits (507), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG     +      S   + FL  L R++Y +G   +P++ +     G V+  
Sbjct: 3   FVQATRSLGRAGLFSLTVLRGSLPTRDFLAELTREIYKIGARSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ FGA      L+ +   RE+  +LTA++  GR+GS+I AE+G M+  ++I A+
Sbjct: 63  QGYRTLTTFGAADALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D V   ++PR WA ++++PLLT +    AI  +         +   VF+S   ++
Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGIFCSLAISASYFEAVHVLGLDNGVFWSALRNS 182

Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +    ++K+        +VA   GF             T  VV +  +V++ + +
Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242

Query: 364 FAIFYF 369
            +   F
Sbjct: 243 LSAMLF 248


>gi|167765445|ref|ZP_02437558.1| hypothetical protein BACSTE_03835 [Bacteroides stercoris ATCC
           43183]
 gi|167697073|gb|EDS13652.1| hypothetical protein BACSTE_03835 [Bacteroides stercoris ATCC
           43183]
          Length = 247

 Score =  199 bits (507), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 64/247 (25%), Positives = 116/247 (46%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G  I   G   A   + + F    I ++  +GV+ + +V+LISF  GAVI  
Sbjct: 1   MIKALRTVGRYIILMGRVFARPERMRMFFRQYINEIEQLGVNSIGIVLLISFFIGAVITI 60

Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +++  ++  + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 61  QIKLNIESPFMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I A++ ++PL+   + F+ IIGA    W    +           
Sbjct: 121 LEIMGVNSANYLILPKIAAMVSTIPLMVTFSIFAGIIGAFCTCWFGGIMSAVDLEYGLQY 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                 I+ G+IK+ F A  I  V+   G++V   S  +GK  T  VV S  +++  D +
Sbjct: 181 MFVEWFIWCGIIKSLFFAFIIASVSAFFGYSVEGGSIEVGKASTDSVVCSSVLILFADLI 240

Query: 364 FAIFYFA 370
                  
Sbjct: 241 LTQLLMG 247


>gi|150009005|ref|YP_001303748.1| ABC transporter permease [Parabacteroides distasonis ATCC 8503]
 gi|256840994|ref|ZP_05546501.1| ABC transporter permease [Parabacteroides sp. D13]
 gi|262383895|ref|ZP_06077031.1| ABC transporter permease [Bacteroides sp. 2_1_33B]
 gi|298375763|ref|ZP_06985719.1| membrane protein [Bacteroides sp. 3_1_19]
 gi|301312055|ref|ZP_07217977.1| putative membrane protein [Bacteroides sp. 20_3]
 gi|149937429|gb|ABR44126.1| conserved hypothetical protein, putative ABC transporter permease
           protein [Parabacteroides distasonis ATCC 8503]
 gi|256736837|gb|EEU50164.1| ABC transporter permease [Parabacteroides sp. D13]
 gi|262294793|gb|EEY82725.1| ABC transporter permease [Bacteroides sp. 2_1_33B]
 gi|298266800|gb|EFI08457.1| membrane protein [Bacteroides sp. 3_1_19]
 gi|300830157|gb|EFK60805.1| putative membrane protein [Bacteroides sp. 20_3]
          Length = 248

 Score =  199 bits (507), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 65/244 (26%), Positives = 117/244 (47%), Gaps = 2/244 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
             H +G       +      ++  F   LI+++Y +GV  + +VI+IS   G VIA Q +
Sbjct: 4   ALHRMGEYTLLMMKSITLPDRWSMFFKQLIKEIYKLGVDSLWIVIIISVFIGTVIAIQIS 63

Query: 188 FQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
             +S      F+I   +  + L E    + A+++AG+ GS I +EIG+M++ E+IDA+  
Sbjct: 64  LNISSPLIPKFTIGYTTREIILLEFSSSIMALILAGKVGSNIASEIGTMRVTEQIDAMEI 123

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY-DIPFAVFFSRFHSTA 305
           MG++    LI P++  L+I +P+L I + F+ I+G     +     +  + F        
Sbjct: 124 MGVNSANFLILPKMLGLMIFIPVLVIFSMFTGIMGGIFASYSTSTGMTPSSFEYGLQFYF 183

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
               I+  +IK+   A  I  +A   G+ V   +  +GK  T  VV S  ++++ D +  
Sbjct: 184 NEFYIWYSIIKSVVYAFIISSIAAYFGYNVKGGALEVGKASTNAVVMSSIMILLADVILT 243

Query: 366 IFYF 369
               
Sbjct: 244 HLML 247


>gi|189463681|ref|ZP_03012466.1| hypothetical protein BACINT_00012 [Bacteroides intestinalis DSM
           17393]
 gi|189438631|gb|EDV07616.1| hypothetical protein BACINT_00012 [Bacteroides intestinalis DSM
           17393]
          Length = 247

 Score =  199 bits (507), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 64/247 (25%), Positives = 114/247 (46%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G  I   G   A   + + F    + +M  +GV+ + +V+LISF  GAVI  
Sbjct: 1   MIKALKTVGRYIMLMGRTFARPERMRMFFRQYLNEMGQLGVNSIGIVLLISFFIGAVITI 60

Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +++  ++  + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 61  QIKLNIESPFMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I A++ ++P L   + F+ IIGA    W    +           
Sbjct: 121 LEIMGVNSANYLILPKICAMVTTIPFLVTFSIFAGIIGAFATCWFGGIMSAVDLEYGLQY 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                 I+ G+IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D +
Sbjct: 181 MFVEWFIWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLILFADLI 240

Query: 364 FAIFYFA 370
                  
Sbjct: 241 LTKLLMG 247


>gi|159044922|ref|YP_001533716.1| hypothetical protein Dshi_2379 [Dinoroseobacter shibae DFL 12]
 gi|157912682|gb|ABV94115.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
          Length = 258

 Score =  199 bits (506), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 7/264 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
              L   IG  ++  +  +   A  +G   S+        + ++ F  +L+     +G  
Sbjct: 1   MIRLIAAIGASVLGILGAAGRFAIFVGAAFSHM---VRPPFYWREFGQALLN----IGYF 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PVV L +F TG  +A Q     ++F AE     +++I  +RE+G +L  +MIA R  S
Sbjct: 54  SLPVVGLTAFFTGGALALQIYAGGARFSAEAVVPQIVAIGMVRELGPVLGGLMIAARVTS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           +I AEI +MK+ E+IDA+ T+    ++ L +PR+ A I+ +PLL  + +   I+G  +V 
Sbjct: 114 SIAAEIATMKVTEQIDALVTLSTHPMKYLTAPRVLAAILVVPLLVAVGDTIGIMGGYLVS 173

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
                   A +         L +I + L K         ++    G   G  +  +G   
Sbjct: 174 TSRLGFNPATYLQNTVDFLELHDIVSSLAKGAVFGAIAALMGCYSGMNSGRGAQGVGAAT 233

Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370
            + VV +  +++  + +    +F+
Sbjct: 234 KSSVVAAAVLILAANYMLTELFFS 257


>gi|154494356|ref|ZP_02033676.1| hypothetical protein PARMER_03711 [Parabacteroides merdae ATCC
           43184]
 gi|154085800|gb|EDN84845.1| hypothetical protein PARMER_03711 [Parabacteroides merdae ATCC
           43184]
          Length = 248

 Score =  199 bits (506), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 63/244 (25%), Positives = 118/244 (48%), Gaps = 2/244 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
             H +G  +   G+  +   ++  F   LI+++Y +GV  + +V++IS   G VIA Q +
Sbjct: 4   ALHQVGEYVMLMGKCISVPNRWSMFFKQLIKEIYKLGVDSLWIVVIISIFIGTVIAIQIS 63

Query: 188 FQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
             +S      F+I   +  + L E    + ++++AG+ GS I +EIG+M++ E+IDA+  
Sbjct: 64  LNISSPLIPKFTIGYTTREIILLEFSSSIMSLILAGKVGSNIASEIGTMRVTEQIDAMEI 123

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY-DIPFAVFFSRFHSTA 305
           MG++    LI P++  ++  +P+L I + F+ I+G           +  A F        
Sbjct: 124 MGVNSANFLILPKMVGMMTFIPVLVIFSMFTGILGGIAASHSTGTGMTPASFEYGLQFYF 183

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
               I+  +IK+   A  I  +A   G+ V   +  +GK  T  VV S  ++++ D +  
Sbjct: 184 NEFYIWYSIIKSVVYAFIISSIAAYFGYNVKGGALEVGKASTNAVVMSSIMILLADVILT 243

Query: 366 IFYF 369
               
Sbjct: 244 NLML 247


>gi|298384787|ref|ZP_06994346.1| membrane protein [Bacteroides sp. 1_1_14]
 gi|298261931|gb|EFI04796.1| membrane protein [Bacteroides sp. 1_1_14]
          Length = 247

 Score =  199 bits (506), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G  I   G   +   + + F    + +M  +GV+ + +V+LISF  GAVI  
Sbjct: 1   MIKALRTVGRYIMLMGRTFSRPERMRMFFRQYLNEMEQLGVNSIGIVLLISFFIGAVITI 60

Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +++  ++  + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 61  QIKLNIESPWMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I A++  +P+L   + F+ IIGA    W    +           
Sbjct: 121 LEIMGINSANYLILPKITAMVTVIPVLVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQY 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                 I+ G+IK+ F A  I  V+   G+ V   S ++GK  T  VV S  +++  D +
Sbjct: 181 MFVEWFIWAGIIKSLFFAFIIASVSAFFGYTVDGGSIAVGKASTDAVVSSSVLILFADLV 240

Query: 364 FAIFYFA 370
                  
Sbjct: 241 LTKLLMG 247


>gi|21220886|ref|NP_626665.1| ABC-transporter integral membrane protein [Streptomyces coelicolor
           A3(2)]
 gi|256787958|ref|ZP_05526389.1| ABC-transporter integral membrane protein [Streptomyces lividans
           TK24]
 gi|289771845|ref|ZP_06531223.1| ABC-transporter integral membrane protein [Streptomyces lividans
           TK24]
 gi|8247037|emb|CAB92895.1| putative ABC-transporter integral membrane protein [Streptomyces
           coelicolor A3(2)]
 gi|289702044|gb|EFD69473.1| ABC-transporter integral membrane protein [Streptomyces lividans
           TK24]
          Length = 254

 Score =  199 bits (506), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 62/247 (25%), Positives = 106/247 (42%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G + +   E   + ++        + Q ++V    +    L+S   GAVIA 
Sbjct: 2   ITGALRQTGRLFALAAEVVRAVFRRPFQFREFVEQFWFVASVTILPAALVSIPFGAVIAL 61

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      Q GA+ F+     +  +++   L+ A++IAG  GSAI A++GS +I EE+DA+
Sbjct: 62  QVGSLTEQLGAQSFTGGASVLAVVQQASPLIVALLIAGAGGSAICADLGSRRIREELDAM 121

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  V+ L+ PR+ A +    LL  L +   I+G               + S F + 
Sbjct: 122 EVMGVSPVQRLVVPRVLAAMGVAVLLNGLVSVVGILGGYFFNVIMQGGTPGAYLSSFSAL 181

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A L +++   +KA       GIVA   G         +G  V   VV +  ++  ++ + 
Sbjct: 182 AQLPDLYVSELKALVFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMVM 241

Query: 365 AIFYFAI 371
              Y  I
Sbjct: 242 TAVYLQI 248


>gi|91070487|gb|ABE11396.1| putative transporter, membrane component [uncultured
           Prochlorococcus marinus clone HOT0M-1A11]
          Length = 251

 Score =  198 bits (505), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 112/247 (45%), Gaps = 3/247 (1%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +    L   +   G+     ++ K     L  Q+   G   + +V++     G V   Q 
Sbjct: 5   NFFKRLLSSLIIGGQAMNFIFRGKISKNDLFDQLMESGPGSLLIVLITGIAAGTVFNIQV 64

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A QL+  G       L+++   RE+  LLTA ++ G+  +A  A++G+MK+ E+I+AI  
Sbjct: 65  ASQLTSMGVSSEIGGLLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTEQIEAITM 124

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS--- 303
           +  + V+ L+ PR+ +++I  P+  +L    A+    I    +Y +P  VF++   S   
Sbjct: 125 LRTEPVQYLVVPRLLSMVIMSPIQCLLFLSVALWSGQIWSTIFYKVPPIVFWTSVRSGNV 184

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
           + T  ++ + LIK+      I I+A   G         +G   T  VV ++  V ++D L
Sbjct: 185 SLTSTDLTSMLIKSVVFGLIISIIACGYGLTTKGGPKEVGTSTTGAVVMTLVTVSLMDVL 244

Query: 364 FAIFYFA 370
                F 
Sbjct: 245 LTQILFG 251


>gi|302560790|ref|ZP_07313132.1| YrbE family protein [Streptomyces griseoflavus Tu4000]
 gi|302478408|gb|EFL41501.1| YrbE family protein [Streptomyces griseoflavus Tu4000]
          Length = 254

 Score =  198 bits (505), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 63/247 (25%), Positives = 107/247 (43%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G + +   E   + ++        I Q +++    +    L+S   GAVIA 
Sbjct: 2   ITGALRQTGRLFALAAEVSRAVFRRPFQFREFIEQFWFIAGVTILPAALVSIPFGAVIAL 61

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      Q GA+ F+     +  +++   L+ A++IAG  GSAI A++GS KI EE+DA+
Sbjct: 62  QVGSLTQQLGAQSFTGGASVLAVVQQASPLIVALLIAGAGGSAICADLGSRKIREELDAM 121

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  V+ L+ PR+ A +    LL  L +    +G         D     + S F + 
Sbjct: 122 EVMGVSPVQRLVVPRVLATMGVAVLLNGLVSVVGTLGGYFFNVVMQDGTPGAYLSSFSAL 181

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A L++++   +KA       GIVA   G         +G  V   VV +  ++  ++ + 
Sbjct: 182 AQLSDLYISELKALVFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMVM 241

Query: 365 AIFYFAI 371
              Y  I
Sbjct: 242 TGIYLQI 248


>gi|294672817|ref|YP_003573433.1| hypothetical protein PRU_0026 [Prevotella ruminicola 23]
 gi|294473166|gb|ADE82555.1| putative membrane protein [Prevotella ruminicola 23]
          Length = 251

 Score =  198 bits (505), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 60/241 (24%), Positives = 110/241 (45%), Gaps = 1/241 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
               G  +   G   +   + + FL   I +M  +G++ + +V++ISF  GAVI  Q   
Sbjct: 10  LTTFGRYLMLMGRVFSRPERMRMFLKQYITEMTQLGINSIGIVLIISFFIGAVICIQMKL 69

Query: 189 QLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +       +     +  + L E    +  +++AG+ GS I +E+G+M++ ++IDA+  M
Sbjct: 70  NIQSPWMPRWVAGYTTREILLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIM 129

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    LI P+I  L+  +P L I ++ + IIGA    +  + I      +        
Sbjct: 130 GINSACYLILPKIIGLLTIMPFLVIFSSATGIIGAYGTAYIGHIIAPDDLTAGLQHAFIP 189

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             ++  +IK+ F A  I  V    G+ V   S ++GK  T  VV S  +++  D      
Sbjct: 190 WFVWMSIIKSQFFAFIISSVPAFCGYTVEGGSVNVGKASTDAVVTSSVLILFSDVFLTQL 249

Query: 368 Y 368
            
Sbjct: 250 L 250


>gi|29349246|ref|NP_812749.1| hypothetical protein BT_3838 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253573093|ref|ZP_04850484.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|29341154|gb|AAO78943.1| putative ABC transporter [Bacteroides thetaiotaomicron VPI-5482]
 gi|251837316|gb|EES65416.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 247

 Score =  198 bits (505), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G  I   G   +   + + F    + +M  +GV+ + +V+LISF  GAVI  
Sbjct: 1   MIKALRTVGRYIILMGRTFSRPERMRMFFRQYLNEMEQLGVNSIGIVLLISFFIGAVITI 60

Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +++  ++  + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 61  QIKLNIESPWMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I A++  +P+L   + F+ IIGA    W    +           
Sbjct: 121 LEIMGINSANYLILPKITAMVTVIPVLVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQY 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                 I+ G+IK+ F A  I  V+   G+ V   S ++GK  T  VV S  +++  D +
Sbjct: 181 MFVEWFIWAGIIKSLFFAFIIASVSAFFGYTVDGGSIAVGKASTDAVVSSSVLILFADLV 240

Query: 364 FAIFYFA 370
                  
Sbjct: 241 LTKLLMG 247


>gi|317968902|ref|ZP_07970292.1| putative transporter, membrane component [Synechococcus sp. CB0205]
          Length = 257

 Score =  198 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 58/239 (24%), Positives = 109/239 (45%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  +   G+  ++  K +     LI ++   G     ++++     G V   Q A +L 
Sbjct: 18  LGESLLIGGQAVSALAKGQINPNDLIAELMEAGPGSFLIILITGLAAGTVFNIQAASELV 77

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + GA      ++++   REI  +LTA ++ G+  +A  A++G+MK+ E+IDAI  +  D 
Sbjct: 78  KQGAGSTVGGILALGLAREIAPILTATLVTGKVATAYAAQLGTMKVTEQIDAITMLRTDP 137

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V+ L+ PR+ A+++  P+  +     AI    +     Y+IP  VF++        +++ 
Sbjct: 138 VQYLVVPRLLAMVVMTPVQCLAFFGVAIWSGQVSSAILYNIPPDVFWTSVRGWMQPSDLP 197

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             L+KA      I ++A   G         +G   T  VV  +  V ++D +     F 
Sbjct: 198 AMLLKAGVFGLQIAVIACGWGLTTRGGPKEVGTSTTGAVVMILVTVSLMDVVLTQLLFG 256


>gi|193214677|ref|YP_001995876.1| hypothetical protein Ctha_0964 [Chloroherpeton thalassium ATCC
           35110]
 gi|193088154|gb|ACF13429.1| protein of unknown function DUF140 [Chloroherpeton thalassium ATCC
           35110]
          Length = 248

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 71/245 (28%), Positives = 116/245 (47%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +    LG           +  +       ++ QM ++GV  +P+V+L+S  TGA+ A 
Sbjct: 4   FTNFFSELGEATLLFWAVLKALPRIFRDRTLVLAQMSHIGVDSLPLVLLVSIFTGAIAAW 63

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q A+Q+           + S + + E+G +LT ++IAGR G++I AE+G+MK+ E+IDA+
Sbjct: 64  QAAYQMKGLAPLSLVGGITSRVIIIELGPVLTGIIIAGRVGASIAAELGTMKVTEQIDAL 123

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +   R L  PRI A  I +P+L I AN  AI+GA IV   +  I   VFF    + 
Sbjct: 124 EIMAISPSRYLAMPRILATTIMMPVLVIFANIIAIVGAFIVSNMFLGISKQVFFDSLKTF 183

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               ++   L+K+        +     GF     +  +G       V S ++++I D   
Sbjct: 184 FYTGDVVGALVKSGIFGLMTSLAGCHIGFRTDGGAEGVGISTIRSFVVSSAMILIADYFL 243

Query: 365 AIFYF 369
             F F
Sbjct: 244 WFFLF 248


>gi|254451544|ref|ZP_05064981.1| membrane protein [Octadecabacter antarcticus 238]
 gi|198265950|gb|EDY90220.1| membrane protein [Octadecabacter antarcticus 238]
          Length = 258

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 56/254 (22%), Positives = 111/254 (43%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +             +G + + TG+  +   +   +       +  +G   +PVV L +F
Sbjct: 4   SLASLGAGVLGLLAAVGRLATFTGQTISHLVRPPFYGREFANALLQIGYLSLPVVGLTAF 63

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
            TG  +A Q     ++F AE     +++I  +RE+G +L  +MIA R  S+I AEI +MK
Sbjct: 64  FTGGALALQIYSGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMK 123

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           + E+IDA+ T+    ++ L  PR+ A  + +P+L  + +   I G  +V  +      A 
Sbjct: 124 VTEQIDALVTLSTHPMKYLTLPRVLAATLVMPILVGVGDIIGIYGGFLVGTERLGFNAAA 183

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +          ++I + L K         ++    G      +  +G+   + VV +  +
Sbjct: 184 YLQNTADFLEPSDIVSSLAKGAVFGFIAALMGCYYGMNSERGAMGVGRATKSSVVAAAIL 243

Query: 357 VIIIDSLFAIFYFA 370
           ++  + L    +F+
Sbjct: 244 ILAANFLLTEAFFS 257


>gi|33861880|ref|NP_893441.1| putative transporter, membrane component [Prochlorococcus marinus
           subsp. pastoris str. CCMP1986]
 gi|33640248|emb|CAE19783.1| possible transporter, membrane component [Prochlorococcus marinus
           subsp. pastoris str. CCMP1986]
          Length = 251

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 59/246 (23%), Positives = 113/246 (45%), Gaps = 3/246 (1%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               L   +   G+     ++ K     L  Q+   G   + +V++     G V   Q A
Sbjct: 6   FFKRLVSSLIIGGQAINYIFRGKISKNDLFEQLMESGPGSLVIVLITGIAAGTVFNIQVA 65

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL+  G       L+++   RE+  LLTA ++ G+  +A  A++G+MK+ E+I+AI  +
Sbjct: 66  SQLTSMGVSSEIGGLLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTEQIEAITML 125

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS---T 304
             + ++ L+ PR+ ++II  P+  +L    A+    I    +Y++P  VF++   S   +
Sbjct: 126 RTEPIQYLVVPRLLSMIIMSPIQCLLFLSVALWSGQIWSTIFYNVPPIVFWTSVRSGNVS 185

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            T +++ + +IK+      I I+A   G         +G   T  VV ++  V ++D + 
Sbjct: 186 LTSSDLSSMIIKSVVFGLLISIIACGYGLTTKGGPKEVGTSTTGAVVMTLVTVSLMDVVL 245

Query: 365 AIFYFA 370
               F 
Sbjct: 246 TQILFG 251


>gi|28199532|ref|NP_779846.1| toluene tolerance protein [Xylella fastidiosa Temecula1]
 gi|71274637|ref|ZP_00650925.1| Protein of unknown function DUF140 [Xylella fastidiosa Dixon]
 gi|71899306|ref|ZP_00681467.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1]
 gi|71899651|ref|ZP_00681805.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1]
 gi|170730903|ref|YP_001776336.1| toluene tolerance protein [Xylella fastidiosa M12]
 gi|182682267|ref|YP_001830427.1| hypothetical protein XfasM23_1749 [Xylella fastidiosa M23]
 gi|28057647|gb|AAO29495.1| toluene tolerance protein [Xylella fastidiosa Temecula1]
 gi|71164369|gb|EAO14083.1| Protein of unknown function DUF140 [Xylella fastidiosa Dixon]
 gi|71730603|gb|EAO32680.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1]
 gi|71730932|gb|EAO33002.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1]
 gi|167965696|gb|ACA12706.1| toluene tolerance protein [Xylella fastidiosa M12]
 gi|182632377|gb|ACB93153.1| protein of unknown function DUF140 [Xylella fastidiosa M23]
 gi|307578543|gb|ADN62512.1| hypothetical protein XFLM_02565 [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 249

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             S    LG           SS   + F   LIR++Y +G   +P++ +     G V+  
Sbjct: 3   LVSSISSLGRSGLFALTVLRSSLPTRDFFAELIREIYKIGARSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ +GA      L+ +   RE+  +LTA++  GR+GS++ AE+  M+  ++I A+
Sbjct: 63  QGYRTLTLYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSVAAELSLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D +   ++PR WA ++++PLLT +    AI            I   +F+S   ++
Sbjct: 123 ELMAIDPIAKAVAPRFWAAVLTVPLLTGVFCSLAICSGYFQAVHVLGIDNGLFWSGLSNS 182

Query: 305 ATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +    ++K+        +VA   GF             T  VV +  +V++ + +
Sbjct: 183 VDFLEDFGVAMLKSAIFGGTSALVAAYVGFHAQPTIEGTSIATTRAVVNASLLVLMFNFV 242

Query: 364 FAIFYF 369
            +   F
Sbjct: 243 LSALLF 248


>gi|228471177|ref|ZP_04055990.1| conserved hypothetical protein [Porphyromonas uenonis 60-3]
 gi|228306992|gb|EEK16074.1| conserved hypothetical protein [Porphyromonas uenonis 60-3]
          Length = 251

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 57/244 (23%), Positives = 116/244 (47%), Gaps = 1/244 (0%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +   ++G       +      K+  F   LIR++   G+  + +V++ISF  G VI  Q 
Sbjct: 7   NALSVMGEYTLLMAQVFRRPKKWGIFFKQLIREIAKYGLDSIWIVVIISFFIGTVITIQL 66

Query: 187 AFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           +  ++      F+       +   E    +  +++AG+ GS+I +E+ +M++ E+IDA+ 
Sbjct: 67  SINMNSPLIPHFTIGYASREIMFLEFSSSIMCLILAGKVGSSIASELATMRVTEQIDAME 126

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MG++    LI P+I  L++ +P+L++++  + ++G  +  +    I  + F     +  
Sbjct: 127 IMGVNSANFLILPKILGLMLFIPVLSVISMSTGLVGGYLATYFIPTITPSDFEMGLQTFF 186

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
              NIF  +IK+   A  I   A   G+ V   +  +G+  T  VV S  ++++ D +  
Sbjct: 187 VTRNIFYSIIKSLVYAFIISSGASYFGYTVKGGALGVGRASTNAVVSSCVLILLADVVLT 246

Query: 366 IFYF 369
              F
Sbjct: 247 SLLF 250


>gi|332177068|gb|AEE12758.1| protein of unknown function DUF140 [Porphyromonas asaccharolytica
           DSM 20707]
          Length = 251

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 118/246 (47%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +   ++G       +      K+  F   LIR+M   G+  + +V++ISF  G VI  
Sbjct: 5   IGNALSVMGEYTLLMVQVFRRPKKWGIFFKQLIREMAKYGLDSIWIVVIISFFIGTVITI 64

Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q +  +S      F+I      +   E    +  +++AG+ GS+I +E+ +M++ E+IDA
Sbjct: 65  QLSINMSSPLIPRFTIGYAGREIMFLEFSSSIMCLILAGKVGSSIASELATMRVTEQIDA 124

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I  L++ +P+L++++  + ++G  +  +    I  + F     +
Sbjct: 125 MEIMGVNSANFLILPKILGLMLFIPVLSVISMATGLVGGYLATFFIPSITPSDFEMGLQT 184

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              + NIF  +IK+   A  I   A   G+ V   +  +G+  T  VV S  ++++ D +
Sbjct: 185 FFVVKNIFYSIIKSLVYAFIISSGASYFGYTVKGGALGVGRASTNAVVSSCVLILLADVV 244

Query: 364 FAIFYF 369
                F
Sbjct: 245 LTSLLF 250


>gi|268317890|ref|YP_003291609.1| hypothetical protein Rmar_2342 [Rhodothermus marinus DSM 4252]
 gi|262335424|gb|ACY49221.1| protein of unknown function DUF140 [Rhodothermus marinus DSM 4252]
          Length = 253

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 61/241 (25%), Positives = 116/241 (48%), Gaps = 1/241 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +   ++        LG          ++  +FK +  +L  QM  +G+  +P+V + +  
Sbjct: 1   MQSALSRFLLPFRALGQYTLLLVHAFSALGEFKTYRKNLFDQMVRIGIDSIPIVSMAAAF 60

Query: 178 TGAVIAQQGAFQL-SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
           +GAV+  Q A+QL S F  +     +++   + E+ V++T  ++AGR G+ I AE+G+M+
Sbjct: 61  SGAVMTVQTAYQLVSPFIPKTVIGAVVAPSMILELAVVVTGFILAGRVGARIAAELGTMR 120

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           + E+IDA+  MGL+ V  L+ PR+ A ++ LP+L ++A F  I+   +V      +    
Sbjct: 121 VTEQIDALEAMGLNSVSYLVVPRVVAGMVMLPVLYVVACFVGIVSGILVANLGGFLSTGE 180

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           F           +   G+IKA      I  ++  +G+     +  +G+  T   V S   
Sbjct: 181 FLQGARQFFKPFDPIFGVIKAFVFGFVITSISCYKGYFTQGGAEGVGRSTTQAAVLSCVY 240

Query: 357 V 357
           +
Sbjct: 241 I 241


>gi|15837022|ref|NP_297710.1| toluene tolerance protein [Xylella fastidiosa 9a5c]
 gi|9105260|gb|AAF83230.1|AE003893_7 toluene tolerance protein [Xylella fastidiosa 9a5c]
          Length = 249

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             S    LG           SS   + F   LIR++Y +G   +P++ +     G V+  
Sbjct: 3   LVSSISSLGRSGLFALTVLRSSLPTRDFFAELIREIYKIGARSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ +GA      L+ +   RE+  +LTA++  GR+GS++ AE+  M+  ++I A+
Sbjct: 63  QGYRTLTLYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSVAAELSLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D +   ++PR WA I+++PLLT +    AI            I   +F+S   ++
Sbjct: 123 ELMAIDPIAKAVAPRFWAAILTVPLLTGVFCSLAICSGYFQAVHVLGIDNGLFWSGLSNS 182

Query: 305 ATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +    ++K+        +VA   GF             T  VV +  +V++ + +
Sbjct: 183 VDFLEDFGVAMLKSAIFGGTSALVAAYVGFHAQPTIEGTSIATTRAVVNASLLVLMFNFV 242

Query: 364 FAIFYF 369
            +   F
Sbjct: 243 LSALLF 248


>gi|254464755|ref|ZP_05078166.1| membrane protein [Rhodobacterales bacterium Y4I]
 gi|206685663|gb|EDZ46145.1| membrane protein [Rhodobacterales bacterium Y4I]
          Length = 260

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 53/254 (20%), Positives = 114/254 (44%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           + +    + +    +G          +   +   +   ++  +  +G   +PVV L +  
Sbjct: 7   LARLGRTALAGLSAVGRAALFALGAFSHMLRPPYYPREVLNSLLNIGWLSLPVVGLTAIF 66

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG  +A Q     ++F AE     +++I  +RE+G +L  +MIA R  S+I AEI +MK+
Sbjct: 67  TGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKV 126

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+ T+    ++ L++PR+ A +I++P+L  + +   I+G   V  +      A +
Sbjct: 127 TEQIDALVTLSTHPMKYLVAPRVLAALITVPVLVGIGDIIGIMGGYTVAVQNLGFNAAAY 186

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                      +I + L+K         ++    G   G  +  +G+     V  +  ++
Sbjct: 187 LKNTVDFLEPLDIISSLVKGAAFGTIAAMMGCYYGMQSGRGAQGVGRATKGSVEAAAVLI 246

Query: 358 IIIDSLFAIFYFAI 371
           +  + +    +F++
Sbjct: 247 LAANFVLTGVFFSL 260


>gi|312141010|ref|YP_004008346.1| integral membrane protein yrbe4a [Rhodococcus equi 103S]
 gi|325675353|ref|ZP_08155037.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Rhodococcus equi ATCC 33707]
 gi|311890349|emb|CBH49667.1| putative integral membrane protein YrbE4A [Rhodococcus equi 103S]
 gi|325553324|gb|EGD23002.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Rhodococcus equi ATCC 33707]
          Length = 264

 Score =  197 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 56/245 (22%), Positives = 113/245 (46%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
                 G ++    +   +++K        I Q +++    +    L++   GAV++ Q 
Sbjct: 14  GALTQAGNIVQLFVDVVRNTFKRPFQFKEFIEQAWFIASVTILPTALVAIPFGAVVSLQT 73

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
              + Q GAE F+     +  +++   ++TA++IAG +GSA+ A++GS  I EEIDA+  
Sbjct: 74  GSLIKQLGAESFTGAASVLAVIQQGSPIVTALLIAGAAGSAVTADLGSRTIREEIDAMEV 133

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +G++ V+ L+ PR+ A+++   LL  L +   I G               + + F + A 
Sbjct: 134 LGINPVQRLVVPRVLAMVLVAVLLNGLVSVVGIAGGYFFNVILQGGTPGAYLASFSALAQ 193

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L +++   +KA       G++A  +G         +G+ V   VV +  ++   + +  +
Sbjct: 194 LPDLYIAEVKAAIFGVIAGVIAAYKGLTPKGGPKGVGEAVNQAVVITFLVLFFANLILTM 253

Query: 367 FYFAI 371
            Y  I
Sbjct: 254 VYLQI 258


>gi|194367789|ref|YP_002030399.1| hypothetical protein Smal_4017 [Stenotrophomonas maltophilia
           R551-3]
 gi|194350593|gb|ACF53716.1| protein of unknown function DUF140 [Stenotrophomonas maltophilia
           R551-3]
          Length = 249

 Score =  197 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG     +      S   + FL  L R++Y +G   +P++ +     G V+  
Sbjct: 3   FVQATRSLGRAGLFSLTVLRGSLPTRDFLAELTREIYKIGARSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ FGA      L+ +   RE+  +LTA++  GR+GS+I AE+G M+  ++I A+
Sbjct: 63  QGYRTLTTFGAADALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D V   ++PR WA ++++PLLT +    AI  +         +   VF+S    +
Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGIFCSLAISASYFEAVHVLGLDNGVFWSALRGS 182

Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +    ++K+        +VA   GF             T  VV +  +V++ + +
Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242

Query: 364 FAIFYF 369
            +   F
Sbjct: 243 LSAMLF 248


>gi|291449028|ref|ZP_06588418.1| ABC-transporter integral membrane protein [Streptomyces roseosporus
           NRRL 15998]
 gi|291351975|gb|EFE78879.1| ABC-transporter integral membrane protein [Streptomyces roseosporus
           NRRL 15998]
          Length = 253

 Score =  197 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 60/247 (24%), Positives = 108/247 (43%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +     G + +       + ++    +   I Q ++V    +    L+S   GAVIA 
Sbjct: 1   MLAPLRETGKLFALAVAVARAIFRRPFQVREFIEQFWFVASVTILPAALVSIPFGAVIAL 60

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      Q GA+ F+     +  +++   L+ A++I+G +GSAI A++GS KI EE+DA+
Sbjct: 61  QVGSLTQQLGAQSFTGGASVLAVIQQASPLIVALLISGAAGSAICADLGSRKIREELDAM 120

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  ++ L+ PR+ A ++   LL  L +    +G         D     + + F + 
Sbjct: 121 EVMGVSPIQRLVVPRVLATMLVAVLLNGLISVVGTLGGYFFNVIMQDGTPGAYLASFSAL 180

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A L +++    KA       GIVA   G         +G  V   VV +  ++  ++ + 
Sbjct: 181 AQLPDLYISEFKALIFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFFVNMVL 240

Query: 365 AIFYFAI 371
              Y  I
Sbjct: 241 TAIYLQI 247


>gi|123969056|ref|YP_001009914.1| putative transporter, membrane component [Prochlorococcus marinus
           str. AS9601]
 gi|123199166|gb|ABM70807.1| possible transporter, membrane component [Prochlorococcus marinus
           str. AS9601]
          Length = 251

 Score =  197 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 111/247 (44%), Gaps = 3/247 (1%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +    L   +   G+     +K K     L  Q+   G   + +V++     G V   Q 
Sbjct: 5   NFFKRLLSSLIIGGQAINFIFKGKISKNDLFDQLMESGPGSLLIVLITGIAAGTVFNIQV 64

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A QL+  G       L+++   RE+  LLTA ++ G+  +A  A++G+MK+ E+I+AI  
Sbjct: 65  ASQLTSMGVSSEIGGLLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTEQIEAITM 124

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS--- 303
           +  + V+ L+ PR+ +++I  P+  +L    A+    I    +Y +P  VF++   S   
Sbjct: 125 LRTEPVQYLVVPRLLSMVIMSPIQCLLFLSVALWSGQIWSTIFYKVPPIVFWTSVRSGNV 184

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
           + T  ++ + LIK+      I I+A   G         +G   T  VV ++  V ++D  
Sbjct: 185 SLTSTDLTSMLIKSVVFGLLISIIACGYGLTTKGGPKEVGTSTTGAVVMTLVTVSLMDVF 244

Query: 364 FAIFYFA 370
                F 
Sbjct: 245 LTQILFG 251


>gi|126696848|ref|YP_001091734.1| putative transporter, membrane component [Prochlorococcus marinus
           str. MIT 9301]
 gi|126543891|gb|ABO18133.1| possible transporter, membrane component [Prochlorococcus marinus
           str. MIT 9301]
          Length = 251

 Score =  197 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 111/247 (44%), Gaps = 3/247 (1%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +    L   +   G+     +K K     L  Q+   G   + +V++     G V   Q 
Sbjct: 5   NFFKRLLSSLIIGGQAINFIFKGKISKNDLFDQLMESGPGSLLIVLITGIAAGTVFNIQV 64

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A QL+  G       L+++   RE+  LLTA ++ G+  +A  A++G+MK+ E+I+AI  
Sbjct: 65  ASQLTSMGVSSEIGGLLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTEQIEAITM 124

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS--- 303
           +  + V+ L+ PR+ +++I  P+  +L    A+    I    +Y +P  VF++   S   
Sbjct: 125 LRTEPVQYLVVPRLLSMVIMSPIQCLLFLSVALWSGQIWSTIFYKVPPIVFWTSVRSGNV 184

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
           + T  ++ + LIK+      I I+A   G         +G   T  VV ++  V ++D  
Sbjct: 185 SLTSTDLTSMLIKSVVFGLLIAIIACGYGLTTKGGPKEVGTSTTGAVVMTLVTVSLMDVF 244

Query: 364 FAIFYFA 370
                F 
Sbjct: 245 LTQILFG 251


>gi|237712741|ref|ZP_04543222.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262408122|ref|ZP_06084669.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|293369494|ref|ZP_06616073.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f]
 gi|294644221|ref|ZP_06721991.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
 gi|294808601|ref|ZP_06767341.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b]
 gi|298480165|ref|ZP_06998363.1| membrane protein [Bacteroides sp. D22]
 gi|229447218|gb|EEO53009.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262353674|gb|EEZ02767.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292635379|gb|EFF53892.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f]
 gi|292640431|gb|EFF58679.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
 gi|294444200|gb|EFG12927.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b]
 gi|298273446|gb|EFI15009.1| membrane protein [Bacteroides sp. D22]
          Length = 247

 Score =  197 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 114/247 (46%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G      G   +   + + F    + ++  +GV+ + +V+LISF  GAVI  
Sbjct: 1   MIKALRTVGRYFMLMGRTFSRPERMRMFFRQYLNELEQLGVNSIGIVLLISFFIGAVITI 60

Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +++  ++  + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 61  QIKLNIESPWMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I A++  +P+L   + F+ IIGA    W    +           
Sbjct: 121 LEIMGINSANYLILPKITAMVTVIPILVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQY 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                 I+ G+IK+ F A  I  V+   G+ V   S ++GK  T  VV S  +++  D +
Sbjct: 181 MFVEWFIWAGIIKSLFFAFIIASVSAFFGYTVDGGSIAVGKASTDAVVSSSVLILFADLI 240

Query: 364 FAIFYFA 370
                  
Sbjct: 241 LTKLLMG 247


>gi|256420257|ref|YP_003120910.1| hypothetical protein Cpin_1211 [Chitinophaga pinensis DSM 2588]
 gi|256035165|gb|ACU58709.1| protein of unknown function DUF140 [Chitinophaga pinensis DSM 2588]
          Length = 247

 Score =  197 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 65/243 (26%), Positives = 107/243 (44%), Gaps = 1/243 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
             H  G  +       +     + F    +RQ   +G+  + +V++IS   G V   Q A
Sbjct: 5   FFHHFGSYLLMLKGMFSRPENMRMFWKEFMRQCVDIGIGSLGIVLIISMFMGGVTTLQIA 64

Query: 188 FQL-SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           +QL S    +     ++    + E    LT +++AG  GS I +E+G+M+++E+IDA   
Sbjct: 65  YQLISPVIPKSTIAQIVRDTIILEFAPTLTCIVLAGVVGSKIASELGNMRVSEQIDAQEI 124

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG++    LI P+I A II +P L  +A F  I G          +    ++        
Sbjct: 125 MGINTKGYLIMPKILAAIIMIPCLIAIAGFLGIWGGQKAGELGGILSAEQYWQGLRQDFR 184

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
             NIF  L KA   A  I  V    G+ V   +  +GK  T+ VV +  +++ +D L A 
Sbjct: 185 AYNIFFALFKAFVFAFIIASVPSYYGYNVQGGALEIGKASTSAVVVTCVLILFMDYLLAA 244

Query: 367 FYF 369
              
Sbjct: 245 LLL 247


>gi|313886966|ref|ZP_07820667.1| conserved hypothetical protein [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|312923573|gb|EFR34381.1| conserved hypothetical protein [Porphyromonas asaccharolytica
           PR426713P-I]
          Length = 251

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 118/246 (47%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +   ++G       +      K+  F   LIR+M   G+  + +V++ISF  G VI  
Sbjct: 5   IGNALSVMGEYTLLMVQVFRRPKKWGIFFKQLIREMAKYGLDSIWIVVIISFFIGTVITI 64

Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q +  +S      F+I      +   E    +  +++AG+ GS+I +E+ +M++ E+IDA
Sbjct: 65  QLSINMSSPLIPRFTIGYAGREIMFLEFSSSIMCLILAGKVGSSIASELATMRVTEQIDA 124

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I  L++ +P+L++++  + ++G  +  +    I  + F     +
Sbjct: 125 MEIMGVNSANFLILPKILGLMLFIPVLSVISMATGLVGGYLATFFIPSITPSDFEMGLQT 184

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              + NIF  +IK+   A  I   A   G+ V   +  +G+  T  VV S  ++++ D +
Sbjct: 185 FFVVKNIFYSIIKSLVYAFIISSGASYFGYTVKGGALGVGRASTNAVVSSCVLILLADVM 244

Query: 364 FAIFYF 369
                F
Sbjct: 245 LTSLLF 250


>gi|149278644|ref|ZP_01884780.1| ABC transporter, permease [Pedobacter sp. BAL39]
 gi|149230639|gb|EDM36022.1| ABC transporter, permease [Pedobacter sp. BAL39]
          Length = 244

 Score =  197 bits (501), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 67/239 (28%), Positives = 113/239 (47%), Gaps = 1/239 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL- 190
            G  I           K   ++ ++ +QM ++GV  + ++ +IS   GAV+  Q AFQL 
Sbjct: 6   FGRYILLLKAVFRKPEKASIYMKAIFKQMDFIGVGSLGLIAIISTFIGAVMTLQIAFQLV 65

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
           S F  +     +     + E+   ++A+++AG+ GSAI +EIG+M+++E+IDA+  MG++
Sbjct: 66  SDFIPKTIIGSVNRDSSILELSPTISAIVLAGKIGSAISSEIGTMRVSEQIDALEIMGIN 125

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
               LI P+I A I  +PLL I++ F +I G  I       +  A +     +      I
Sbjct: 126 SPGYLILPKIIAGITMVPLLVIMSMFLSITGGYIGGTLSGAVSAAEYVQGITTDFNPYTI 185

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              L+KA      I  V   EGF V   +  + +  T  VV S   ++  D +      
Sbjct: 186 VVALVKAFVFGFIITSVPAYEGFYVKGGALEVAQASTRAVVVSCITILACDYIVTQLLL 244


>gi|148241576|ref|YP_001226733.1| ABC-type transport system, permease component [Synechococcus sp.
           RCC307]
 gi|147849886|emb|CAK27380.1| ABC-type transport system, permease component [Synechococcus sp.
           RCC307]
          Length = 250

 Score =  197 bits (501), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 62/239 (25%), Positives = 110/239 (46%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG      G+  A++ + +  +  L   +   G S   VV++I    G V   Q A +L+
Sbjct: 12  LGSSCLIGGQALAAAARGRVPIGELSENLMEAGPSSFLVVLIIGMAAGTVFNIQVAAELT 71

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + GA      ++++   REI  LLTA+++ G+  +A  A +G+MK+ E+IDAI  +  D 
Sbjct: 72  KQGAGSTVGGILALGLAREIAPLLTAMLLTGKVATAYAASLGTMKVTEQIDAITMLRTDP 131

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A+++  P+  +L     +    +     Y IP  VF+S   +    +++ 
Sbjct: 132 VEYLVVPRVIAMLVMSPVQCLLFFGIGMWSGMLSSSMLYRIPPPVFWSSMRTWMQPSDVP 191

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           + L+KA      I I+A   G         +G   T  VV  +  + I D +     + 
Sbjct: 192 SMLLKATVFGLEIAIIACGWGLTTRGGPKEVGTSTTGAVVMILLTIAITDVILTQVLYG 250


>gi|319788633|ref|YP_004148108.1| hypothetical protein Psesu_3054 [Pseudoxanthomonas suwonensis 11-1]
 gi|317467145|gb|ADV28877.1| protein of unknown function DUF140 [Pseudoxanthomonas suwonensis
           11-1]
          Length = 249

 Score =  197 bits (501), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 62/247 (25%), Positives = 110/247 (44%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           +      LG     +     +S   + FL  L R+ Y +G   +P++ +     G V+  
Sbjct: 3   AVGAVRSLGRAGLFSLSVLRASLPSRDFLAELARETYKIGGRSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ FGA      L+ +   RE+G +LTA++  GR+GS+I AE+G M+  ++I A+
Sbjct: 63  QGYRTLTTFGAADALSTLLGLSLYRELGPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D V   ++PR WA ++ +PLLT      AI  +     K   +    F++    +
Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLCVPLLTGFFCSLAISASWFEAVKVLGLDNGTFWAALQGS 182

Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +    L+K+        +VA   GF             T  VV +  +V++++ +
Sbjct: 183 VDFWDDFGVALLKSAVFGGVSALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMLNFV 242

Query: 364 FAIFYFA 370
            +   F 
Sbjct: 243 MSALLFQ 249


>gi|91070390|gb|ABE11304.1| putative transporter, membrane component [uncultured
           Prochlorococcus marinus clone HF10-88H9]
          Length = 251

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 61/248 (24%), Positives = 111/248 (44%), Gaps = 3/248 (1%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            +    L   +   G+     +K K     L  Q+   G   + +V++     G V   Q
Sbjct: 4   LNFFKRLLSSLIIGGQAINFIFKGKISKNDLFDQLMESGPGSLLIVLITGIAAGTVFNIQ 63

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            A QL+  G       L+++   RE+  LLTA ++ G+  +A  A++G+MK+ E+I+AI 
Sbjct: 64  VASQLTSMGVSSEIGGLLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTEQIEAIT 123

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS-- 303
            +  + V+ L+ PR+ +++I  P+  +L    A+    I    +Y +P  VF++   S  
Sbjct: 124 MLRTEPVQYLVVPRLLSMVIMSPIQCLLFLSVALWSGQIWSTIFYKVPPIVFWTSVRSGN 183

Query: 304 -TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            + T  ++ + LIK+      I I+A   G         +G   T  VV ++  V ++D 
Sbjct: 184 VSLTSTDLTSMLIKSVVFGLLISIIACGYGLTTKGGPKEVGTSTTGAVVMTLVTVSLMDV 243

Query: 363 LFAIFYFA 370
                 F 
Sbjct: 244 FLTQILFG 251


>gi|117164593|emb|CAJ88139.1| putative ABC-transporter integral membrane protein [Streptomyces
           ambofaciens ATCC 23877]
          Length = 254

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 60/247 (24%), Positives = 108/247 (43%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G + +   E   + ++        + Q +++    +    L+S   GAVIA 
Sbjct: 2   ITGALRQTGRLFALAAEVARAIFRRPFQFREFVEQFWFIASVTILPAALVSIPFGAVIAL 61

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      Q GA+ F+     +  +++   L+ A++IAG +GSAI A++GS  I EE+DA+
Sbjct: 62  QVGSLTQQLGAQSFTGGASVLAVVQQASPLIVALLIAGAAGSAICADLGSRTIREELDAM 121

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  V+ L+ PR+ A +    LL  L +   I+G  +      D     + S F + 
Sbjct: 122 EVMGVSPVQRLVVPRVLATMGVAVLLNGLVSVVGILGGYVFNVFLQDGTPGAYLSSFSAL 181

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A L +++   +KA       G+VA   G         +G  V   VV +  ++  ++ + 
Sbjct: 182 AQLPDLYVSELKALVFGFIAGVVAAYRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMVM 241

Query: 365 AIFYFAI 371
              Y  +
Sbjct: 242 TGVYLQL 248


>gi|239982859|ref|ZP_04705383.1| ABC-transporter integral membrane protein [Streptomyces albus
           J1074]
 gi|291454702|ref|ZP_06594092.1| ABC-transporter integral membrane protein [Streptomyces albus
           J1074]
 gi|291357651|gb|EFE84553.1| ABC-transporter integral membrane protein [Streptomyces albus
           J1074]
          Length = 254

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 60/247 (24%), Positives = 105/247 (42%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G + +   E   + ++        + Q +++    +    L+S   GAVIA 
Sbjct: 2   ITGALRQTGRLFALAAEVTRAIFRRPFQFREFVEQFWFIASVTILPAALVSIPFGAVIAL 61

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      Q GA+ F+     +  +++   L+ A++IAG  GSAI A++GS KI EE+DA+
Sbjct: 62  QVGSLTQQLGAQSFTGGASVLAVIQQASPLIVALLIAGAGGSAICADLGSRKIREELDAM 121

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  V+ L+ PR+ A +    LL  + +    +G               + S F + 
Sbjct: 122 EVMGVSPVQRLVVPRVLATMSVAVLLNGMVSVVGTLGGYFFNIILQGGTPGAYLSSFSAL 181

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A L +++   +KA       GIVA   G         +G  V   VV +  ++  ++ + 
Sbjct: 182 AQLPDLYISELKALIFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFFVNMVM 241

Query: 365 AIFYFAI 371
              Y  I
Sbjct: 242 TGLYLQI 248


>gi|229496605|ref|ZP_04390319.1| conserved hypothetical protein [Porphyromonas endodontalis ATCC
           35406]
 gi|229316502|gb|EEN82421.1| conserved hypothetical protein [Porphyromonas endodontalis ATCC
           35406]
          Length = 256

 Score =  197 bits (500), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 61/251 (24%), Positives = 118/251 (47%), Gaps = 1/251 (0%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           K +    +    +G       +  +   ++  F   L+R++  +G+  + +V++ISF  G
Sbjct: 5   KRLGKFTASFRTIGEYTLLMRQVFSRPARWSMFFKQLVREIAKIGLDSILIVMIISFFIG 64

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
            VI  Q A  +S      F+I   +  + L E    +  +++AG+ GS+I +E+G+M++ 
Sbjct: 65  TVITIQLAINISSPMIPRFTIGYSTREIVLLEFSSSIMCLILAGKIGSSIASELGTMRVT 124

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           E+IDA+  MG++    LI P+I  L++ +P+L+I++  +AI G  +  W    +    F 
Sbjct: 125 EQIDALEVMGINSANFLILPKIIGLLLFIPVLSIISMATAIGGGFLATWLTPSLTAEDFE 184

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
                     N+   +IK+   A  I   +   G+ V   +  +G   T  VV S  +++
Sbjct: 185 YGMQLYFNPYNVLYSVIKSLVYAFIITSGSSYFGYNVKGGALGVGVASTNAVVTSSVLIL 244

Query: 359 IIDSLFAIFYF 369
           + D L      
Sbjct: 245 LADVLLTNLLL 255


>gi|328880858|emb|CCA54097.1| putative ABC-transporter integral membrane protein [Streptomyces
           venezuelae ATCC 10712]
          Length = 254

 Score =  197 bits (500), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 105/247 (42%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G + +   E   + ++        + Q ++V    +    L+S   GAVIA 
Sbjct: 2   ITGALRQTGRLFALAAEVSRAVFRRPFQFREFLEQFWFVASVTILPAALVSIPFGAVIAL 61

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      Q GA+ F+     +  +++   L+ A++IAG  GSAI A++GS KI EE+DA+
Sbjct: 62  QVGSLTQQLGAQSFTGGASVLAVIQQASPLIVALLIAGAGGSAICADLGSRKIREELDAM 121

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  V+ L+ PR+ A +    LL  + +    +G               + S F + 
Sbjct: 122 EVMGVSPVQRLVVPRVLATMAVAVLLNGMVSVVGTLGGYFFNIILQGGTPGAYLSSFSAL 181

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A L +++   +KA       GIVA   G         +G  V   VV +  ++  ++ + 
Sbjct: 182 AQLPDLYISELKALIFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFFVNMVL 241

Query: 365 AIFYFAI 371
              Y  I
Sbjct: 242 TGIYLQI 248


>gi|29840386|ref|NP_829492.1| ABC transporter, permease protein, putative [Chlamydophila caviae
           GPIC]
 gi|29834735|gb|AAP05370.1| ABC transporter, permease protein, putative [Chlamydophila caviae
           GPIC]
          Length = 263

 Score =  197 bits (500), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 70/253 (27%), Positives = 117/253 (46%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           +     C     LG  +  T     S    K    S+  Q Y +GV+ +PVV+L   VTG
Sbjct: 10  RIFRVLCLFPLELGRWMGFTCAVIKSCSWKKSLFRSVSLQGYDIGVASLPVVMLTGAVTG 69

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A Q  +QL   G        +    L EIG +LTA+ ++GR G AI A +G+M++ E
Sbjct: 70  IVLALQSYYQLGIHGLSCAIGFFVVKSILVEIGPVLTALALSGRVGGAISAFLGTMRMTE 129

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++ A+ T+G++ +     PRI A II++P L I A +S I    ++    + +P  V+  
Sbjct: 130 QVSAMETLGVNPLEYFALPRIIAGIIAMPALVIAAVWSGIFCGYLLCRYAFQLPAQVYLH 189

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                  L++I   ++K+      I  +A  +G         + K  T  VV S   ++ 
Sbjct: 190 MVSGNVLLSDIVMVIVKSLVFGFIITSLACYQGLGKHCRITDVAKVTTAGVVTSYISILF 249

Query: 360 IDSLFAIFYFAIG 372
            + +   F+  +G
Sbjct: 250 ANCVITSFFHVLG 262


>gi|254462404|ref|ZP_05075820.1| membrane protein [Rhodobacterales bacterium HTCC2083]
 gi|206678993|gb|EDZ43480.1| membrane protein [Rhodobacteraceae bacterium HTCC2083]
          Length = 261

 Score =  196 bits (499), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 56/239 (23%), Positives = 106/239 (44%)

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G +           ++   +L  L   +  VG   +PVV L +  TG  +A Q     ++
Sbjct: 23  GRISIYAFSTLHHIFRRPFYLRELGIAILNVGWLSLPVVGLTAVFTGGALALQIYAGGAR 82

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
           F AE     +++I  +RE+G +L  +MIA R  S+I AEI +MK+ E+IDA+ T+    +
Sbjct: 83  FNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQIDALVTLSTHPM 142

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
           + L  PR+ A +I +P+L  + +   I+G  +V     +     +           ++F+
Sbjct: 143 QYLTVPRVLAGLICVPVLVGVGDVIGILGGYLVATGTLEFNSTTYLVNTFDFLEPRDVFS 202

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
            L K         ++    G   G  +  +G      V  +  +++  + +    +F+I
Sbjct: 203 SLAKGAVFGTIATLMGCYYGMNSGRGAQGVGAATKGSVEAAAILILAANFVLTGVFFSI 261


>gi|325300148|ref|YP_004260065.1| hypothetical protein Bacsa_3064 [Bacteroides salanitronis DSM
           18170]
 gi|324319701|gb|ADY37592.1| protein of unknown function DUF140 [Bacteroides salanitronis DSM
           18170]
          Length = 246

 Score =  196 bits (499), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 1/241 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG  I   G   +   + + +    + +M  +G++ + +V+LISF  GAVI  Q   
Sbjct: 5   ISTLGKYIMLMGRVFSRPERVRMYFKQYVNEMAQLGINSIGIVLLISFFIGAVICIQIKL 64

Query: 189 QLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +       F +   +  + L E    +  +++AG+ GS I +E+G+M++ ++IDA+  M
Sbjct: 65  NIESPWMPRFVVGYTTREILLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIM 124

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    LI P+I  LI  +P+L   + F+ +IGA    W    +               
Sbjct: 125 GVNSASYLILPKILGLITMIPVLVTFSIFAGVIGAFCTAWFAGIMNATDLEYGIQYCFVE 184

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             ++   IK+ F A  I  V+   G+ V   S ++GK  T  VV S  +++  D +    
Sbjct: 185 WYVWCSFIKSFFFAFIISSVSAFFGYTVEGGSIAVGKASTDAVVSSSVLILFSDLILTKL 244

Query: 368 Y 368
            
Sbjct: 245 L 245


>gi|255014836|ref|ZP_05286962.1| ABC transporter permease [Bacteroides sp. 2_1_7]
          Length = 241

 Score =  196 bits (499), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 64/240 (26%), Positives = 116/240 (48%), Gaps = 2/240 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G       +      ++  F   LI+++Y +GV  + +VI+IS   G VIA Q +  +S
Sbjct: 1   MGEYTLLMMKSITLPDRWSMFFKQLIKEIYKLGVDSLWIVIIISVFIGTVIAIQISLNIS 60

Query: 192 QFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
                 F+I   +  + L E    + A+++AG+ GS I +EIG+M++ E+IDA+  MG++
Sbjct: 61  SPLIPKFTIGYTTREIILLEFSSSIMALILAGKVGSNIASEIGTMRVTEQIDAMEIMGVN 120

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY-DIPFAVFFSRFHSTATLAN 309
               LI P++  L+I +P+L I + F+ I+G     +     +  + F            
Sbjct: 121 SANFLILPKMLGLMIFIPVLVIFSMFTGIMGGIFASYSTSTGMTPSSFEYGLQFYFNEFY 180

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           I+  +IK+   A  I  +A   G+ V   +  +GK  T  VV S  ++++ D +      
Sbjct: 181 IWYSIIKSVVYAFIISSIAAYFGYNVKGGALEVGKASTNAVVMSSIMILLADVILTHLML 240


>gi|296114211|ref|ZP_06832866.1| ABC transporter permease protein [Gluconacetobacter hansenii ATCC
           23769]
 gi|295979287|gb|EFG86010.1| ABC transporter permease protein [Gluconacetobacter hansenii ATCC
           23769]
          Length = 261

 Score =  196 bits (499), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 64/264 (24%), Positives = 126/264 (47%), Gaps = 7/264 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             +    IG+ ++  +  +   A      +          + ++ F  SLI     +G  
Sbjct: 4   ILDFIAGIGRTLLDMVRMAGQVALFG---LLAVSHLVRPPFYWRTFCGSLIE----IGYF 56

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PVV L +  +G VIA Q     +Q+ A+     ++ +   RE+G +L  +M+AGR G+
Sbjct: 57  SLPVVALTALFSGGVIALQSYTGFAQYHAQSAIAGIVILAVTRELGPVLAGLMVAGRVGA 116

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG+M++  +IDA+ T+  + ++ L++PR+ A  ++LP L I+A+   ++G  IV 
Sbjct: 117 AMSAEIGTMRVTNQIDALSTLSTNPIKYLVTPRLLAGTLALPFLVIIADILGVMGGFIVC 176

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
               +     + S   ++  + ++  GL KA      I ++    G+     +  +G   
Sbjct: 177 VMKLNFVPQAYISATIASFRMMDVTVGLAKAAIFGFLIALMGCYHGYHSRGGAEGVGAAT 236

Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370
           T  VV +  +++  D L    +F+
Sbjct: 237 TAAVVAASILLLTFDYLLTDVFFS 260


>gi|162146610|ref|YP_001601069.1| hypothetical protein GDI_0788 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161785185|emb|CAP54731.1| putative membrane protein [Gluconacetobacter diazotrophicus PAl 5]
          Length = 373

 Score =  196 bits (499), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 78/346 (22%), Positives = 147/346 (42%), Gaps = 13/346 (3%)

Query: 31  INKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY---HGKIKLQGVSTHIEQLFSLISF 87
           + ++           A+   DT     +    ++    H  ++   +     +L  L+  
Sbjct: 38  LRQAAPGRPLTFRSDALGRWDTGLIAFLWDLKQRATQAHLDLRTDTLPDSARKLLDLL-- 95

Query: 88  THRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSY 147
                     P               +G   ++ + +  +   +         E      
Sbjct: 96  ------PEAPPPPPTPRPRTFAPVTALGAFTIESLTEIGTVTELGVETARGGLEAVTGRG 149

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           + +   + L+  +   G S + +V +++F+ GA++A  GA QL +F A+I+   L+ I  
Sbjct: 150 RMRS--IDLMSNIRDAGPSALLIVSVVNFLVGAILAFVGAVQLRKFAADIYVASLVGIAM 207

Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267
           +RE+  ++TA+++AGR+G A  A I +M+ NEEIDA+   G+     LI P I  L+ ++
Sbjct: 208 VREMSAVMTAIIMAGRTGGAYAARIATMQGNEEIDALTVFGIPVSSYLILPSILGLVATM 267

Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327
           P L +      ++G   V      +  A +F +  +   L     G IK+ F A  IG+ 
Sbjct: 268 PFLYLYGCLIGMLGGFTVAISMLAVTGAGYFHQTINAVGLNQFEFGFIKSIFFAILIGLT 327

Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           + + G   G  +  +G   T  VV  I  VI +D++FA+    +GI
Sbjct: 328 SCRIGLRSGRSAADVGVAATRAVVVGIVGVITLDAIFAVIATTLGI 373


>gi|227538358|ref|ZP_03968407.1| ABC superfamily ATP binding cassette transporter permease protein
           [Sphingobacterium spiritivorum ATCC 33300]
 gi|300774198|ref|ZP_07084065.1| ABC superfamily ATP binding cassette transporter permease protein
           [Sphingobacterium spiritivorum ATCC 33861]
 gi|227241873|gb|EEI91888.1| ABC superfamily ATP binding cassette transporter permease protein
           [Sphingobacterium spiritivorum ATCC 33300]
 gi|300758877|gb|EFK55706.1| ABC superfamily ATP binding cassette transporter permease protein
           [Sphingobacterium spiritivorum ATCC 33861]
          Length = 252

 Score =  196 bits (498), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 65/237 (27%), Positives = 110/237 (46%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +       +      F          +  +IRQ Y +G   +P++ +  F+ G V 
Sbjct: 3   NKVRNLLIEFANIHRFLMRFLKEVVSPPFEIKEIIRQCYEIGWRSLPLISVTGFIVGFVF 62

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
            +Q    L +FGA  +   L+SI  +R +  L+TA++ +G+ GS I AE+ SM + E+ID
Sbjct: 63  TKQSRPSLEEFGATSWLPSLISIAIIRALAPLVTALIASGKVGSQIGAELSSMNVTEQID 122

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+   G +  + LI  R+WA  I +P+L        ++G  + I    D+ F  FF++  
Sbjct: 123 AMEVSGTNPFKFLIVSRVWATTIGIPILCFYTAGIGLLGGYLSIASKDDVSFLSFFTQVF 182

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                 +IF  + +A      IG V+   G+     +  +GK   + VV S+ IV I
Sbjct: 183 EAIAYKDIFAMVFRAVVFGFTIGAVSSYCGYFSSKGTEGVGKAANSAVVASMFIVFI 239


>gi|262195117|ref|YP_003266326.1| hypothetical protein Hoch_1886 [Haliangium ochraceum DSM 14365]
 gi|262078464|gb|ACY14433.1| protein of unknown function DUF140 [Haliangium ochraceum DSM 14365]
          Length = 328

 Score =  196 bits (498), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 58/266 (21%), Positives = 108/266 (40%)

Query: 98  PQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLI 157
           P  +    S       +   +             LG  I       +   +    L + +
Sbjct: 46  PAEATAEESEGGFKRAVFTGVRDAFAPVPRFLDRLGEHIILAVRALSWLPRRPLRLANYL 105

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
               Y+G   +P+++L+   TGAV+A Q  F    FG E     +       E+  +L A
Sbjct: 106 DAAEYIGFGSLPIILLVGLFTGAVMALQSVFAFRDFGLESMVGGVTGKALATELAPVLAA 165

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +M+ GR+ + I  E+G+M+I+E+IDA+ +M ++ ++ L+ PR+ A     P+LT++    
Sbjct: 166 LMLTGRAAAGIATELGTMRISEQIDALESMAVNPIQFLVLPRLVAGFFMAPILTLIFFVI 225

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            + GA  V      +    F           ++  G++K+      + ++   +GF    
Sbjct: 226 GMGGAYFVSVISEGVDHGQFVHNTKDILNFVDVLQGILKSAVFGFVVVLIGCYQGFFASG 285

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSL 363
               +G   T  VV     V+I D  
Sbjct: 286 GGRGVGLGTTRAVVIGSVTVLITDYF 311


>gi|326382581|ref|ZP_08204272.1| hypothetical protein SCNU_06565 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326198700|gb|EGD55883.1| hypothetical protein SCNU_06565 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 281

 Score =  195 bits (497), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 59/245 (24%), Positives = 109/245 (44%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +    L + +           K +      IRQ  ++  + V   +L++   G +++ Q 
Sbjct: 31  TFGRQLAMFVEVFKVLIEDILKKRFPFGEFIRQCAFMASTSVFPTLLVAIPIGVIVSIQV 90

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           +    Q GA  FS     +  +R+   L+T++++AG  GSAI A++GS  I EEIDA+R 
Sbjct: 91  SNIAGQIGATSFSGAATGLGVIRQGAPLVTSLLLAGAVGSAIAADLGSRTIREEIDAMRV 150

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG++ ++ LISPR+ A ++   LL     F   I   +    +       +   F S A 
Sbjct: 151 MGVNPIQRLISPRLLATMVVSFLLCGFVCFVGFITGYLFNVYFQGGTPGSYTGTFASFAG 210

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           + ++   L+KA      + IVA   G +       +   V   VV S+ ++  ++ +   
Sbjct: 211 VPDLLFALVKAVIFGAIVAIVACDRGLSTSGGPAGVANSVNAAVVNSVILLFTVNVVLTQ 270

Query: 367 FYFAI 371
            +  +
Sbjct: 271 VFALV 275


>gi|157413886|ref|YP_001484752.1| putative transporter, membrane component [Prochlorococcus marinus
           str. MIT 9215]
 gi|254526072|ref|ZP_05138124.1| ABC-type transport system involved in resistance to organic
           solvents permease component [Prochlorococcus marinus
           str. MIT 9202]
 gi|157388461|gb|ABV51166.1| possible transporter, membrane component [Prochlorococcus marinus
           str. MIT 9215]
 gi|221537496|gb|EEE39949.1| ABC-type transport system involved in resistance to organic
           solvents permease component [Prochlorococcus marinus
           str. MIT 9202]
          Length = 251

 Score =  195 bits (497), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 62/238 (26%), Positives = 111/238 (46%), Gaps = 3/238 (1%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +   G+     +K K     L  Q+   G   + +V++     G V   Q A QL+  G 
Sbjct: 14  LVIGGQAINFIFKGKISKNDLFEQLMESGPGSLLIVLITGIAAGTVFNIQVASQLTSMGV 73

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
                 L+++   RE+  LLTA ++ G+  +A  A++G+MK+ E+I+AI  +  + V+ L
Sbjct: 74  SSEIGGLLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTEQIEAITMLRTEPVQYL 133

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS---TATLANIFT 312
           + PR+ +++I  P+  +L    A+    I    +Y +P  VF++   S   + T A++ +
Sbjct: 134 VVPRLLSMVIMSPIQCLLFLSVALWSGQIWSTIFYKVPPIVFWTSVRSGNVSLTSADLTS 193

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            LIK+      I I+A   G         +G   T  VV ++  V ++D L     F 
Sbjct: 194 MLIKSVVFGLLISIIACGYGLTTKGGPKEVGTSTTGAVVMTLVTVSLMDVLLTQILFG 251


>gi|317125894|ref|YP_004100006.1| hypothetical protein Intca_2778 [Intrasporangium calvum DSM 43043]
 gi|315589982|gb|ADU49279.1| protein of unknown function DUF140 [Intrasporangium calvum DSM
           43043]
          Length = 256

 Score =  195 bits (497), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 63/239 (26%), Positives = 115/239 (48%)

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G + +   +   +  +    +   I+Q +++    +    L+S   GAVIA Q      Q
Sbjct: 13  GSLFALALDVLRALPRRPFQVKEFIQQSWFLASVTILPTALVSIPFGAVIALQLGTLTRQ 72

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
            GA+ ++     +  LRE   ++TA++IAG  GSAI A++GS KI EEIDA+  +G+  +
Sbjct: 73  LGAQSYTGAASVLAVLREASPIVTALLIAGAGGSAICADLGSRKIREEIDAMEVLGISPI 132

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
           + L+ PR+ A ++   LL  L +   ++G  +            + + F + A L +++ 
Sbjct: 133 QRLVVPRVLASMLVAVLLNGLVSVVGVVGGYVFNVIVQGGTPGAYIASFTAMAQLPDLWA 192

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           G +KA       GIVA  +G   G     +G  V   VV +  ++ +++ +    YF +
Sbjct: 193 GELKALVFGAIAGIVAAHKGLTAGGGPKGVGDAVNQSVVITFMLLFVVNFVITAVYFQV 251


>gi|254436878|ref|ZP_05050372.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
 gi|198252324|gb|EDY76638.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
          Length = 258

 Score =  195 bits (497), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 56/254 (22%), Positives = 110/254 (43%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +             +G + + TG+  +   +   +       +  +G   +PVV L +F
Sbjct: 4   ALASLGAAFLGLLAAIGRLATFTGQTISHLVRPPFYGREFATALLQIGYFSLPVVGLTAF 63

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
            TG  +A Q     ++F AE     +++I  +RE+G +L  +MIA R  S+I AEI +MK
Sbjct: 64  FTGGALALQIYSGGARFSAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMK 123

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           + E+IDA+ T+    ++ L  PR+ A  + +P+L  + +   I G  +V  +      A 
Sbjct: 124 VTEQIDALVTLSTHPMKYLTLPRVLAATLVMPILVGVGDIIGIYGGFLVGTERLGFNAAA 183

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +           +I + L K         ++    G      +  +G+   + VV +  +
Sbjct: 184 YLQNTVDFLEPRDIISSLAKGAVFGFIAALMGCYHGMNSERGAMGVGRATKSSVVAAAIL 243

Query: 357 VIIIDSLFAIFYFA 370
           ++  + L    +F+
Sbjct: 244 ILAANFLLTEAFFS 257


>gi|163732016|ref|ZP_02139462.1| hypothetical protein RLO149_01157 [Roseobacter litoralis Och 149]
 gi|161394314|gb|EDQ18637.1| hypothetical protein RLO149_01157 [Roseobacter litoralis Och 149]
          Length = 256

 Score =  195 bits (497), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 54/247 (21%), Positives = 108/247 (43%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G +    G+  +   +   +    + Q+  +G   +PVV L +  TG  +A 
Sbjct: 10  IMGALAAIGRIAIFGGQCISHLVRPPFYGREFVTQLVNIGWLSLPVVGLTALFTGGALAL 69

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q     S+F AE     ++++  +RE+G +L  +MIA R  S+I AEI +MK+ E+IDA+
Sbjct: 70  QIYAGGSRFNAESVVPQIVAVGMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQIDAL 129

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            T+    ++ L  PR+ A ++ +PLL  + +   I G   V         A + +   + 
Sbjct: 130 VTLSTHPMKYLTVPRVLAAVLVVPLLVAIGDIIGIFGGYAVATGTLGFNAATYINNTVNF 189

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               ++ + L K         ++    G   G  +  +G+     V  +  +++  + + 
Sbjct: 190 LEPLDVISSLTKGAVFGFCAALMGCYHGMNSGRGAMGVGRATKGAVEGAAILILAANFVL 249

Query: 365 AIFYFAI 371
              +F +
Sbjct: 250 TGVFFTL 256


>gi|300784333|ref|YP_003764624.1| ABC transporter permease [Amycolatopsis mediterranei U32]
 gi|299793847|gb|ADJ44222.1| ABC transport system permease protein [Amycolatopsis mediterranei
           U32]
          Length = 262

 Score =  195 bits (497), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 60/245 (24%), Positives = 116/245 (47%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +    +G + + + E   + +K        I+Q ++     +    L++   GAVIA Q 
Sbjct: 12  AALTQVGRLATLSWEVLRAIFKRPFQAREWIQQCWFFASVTILPTALVAIPFGAVIALQL 71

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
               +Q GA+ F+    ++  +++   L+TA+++AG  GSA+ A+IG+ KI EEIDA+  
Sbjct: 72  GSLTAQIGAQSFTGAASALAIVQQASPLITALLVAGAGGSAVCADIGARKIREEIDAMEV 131

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +G++ ++ LI PR+ A ++   LL  L +   ++G               + + F++ A 
Sbjct: 132 LGVNPIQRLIVPRVLAAMVVSVLLNGLVSVVGVLGGYFFNVVLQGGTPGAYLASFNALAQ 191

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           + +++   IKA       G+VA   G         +G  V   VV +  ++ +I+ +   
Sbjct: 192 VPDLWVSEIKALLYGFVAGVVAAFRGLNPAGGPKGVGDAVNQAVVITFLLLFLINVVLTA 251

Query: 367 FYFAI 371
            Y  I
Sbjct: 252 IYLRI 256


>gi|262202881|ref|YP_003274089.1| hypothetical protein Gbro_2988 [Gordonia bronchialis DSM 43247]
 gi|262086228|gb|ACY22196.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247]
          Length = 285

 Score =  195 bits (497), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 57/245 (23%), Positives = 110/245 (44%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +    +G+ +          +K +      IRQ  ++  + V   +L++   G +++ Q 
Sbjct: 35  TFGRQMGMFVEVFKVLFVDIFKRRFPFGEFIRQCAFMSSTSVFPTLLVAIPIGVIVSIQV 94

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           +    Q GA  FS     +  +R+   L+T++++AG  GSAI A++GS  I +EIDA+R 
Sbjct: 95  SNIAGQIGATSFSGAATGLGVIRQGAPLVTSLLLAGAVGSAIAADLGSRTIRDEIDAMRV 154

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG++ ++ LISPR+ A ++   LL     F   I        +       +   F S A+
Sbjct: 155 MGVNPIQRLISPRLLATMVVSFLLCGFVCFVGFITGYAFNVYFQGGTPGSYTGTFASFAS 214

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
            +++   L KA      + +VA   G +       +   V   VV S+ ++  ++ +   
Sbjct: 215 TSDLLFALGKAVIFGAIVAVVACDRGLSTKGGPAGVANSVNAAVVNSVLLLFTVNVILTQ 274

Query: 367 FYFAI 371
            +  +
Sbjct: 275 LFAIL 279


>gi|291298382|ref|YP_003509660.1| hypothetical protein Snas_0856 [Stackebrandtia nassauensis DSM
           44728]
 gi|290567602|gb|ADD40567.1| protein of unknown function DUF140 [Stackebrandtia nassauensis DSM
           44728]
          Length = 253

 Score =  195 bits (497), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 57/247 (23%), Positives = 111/247 (44%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G     T +   +  +        I+Q +++    +    L++   GAVIA 
Sbjct: 1   MGRMFAGVGRFTGFTIDTFKAVPRRPFQWSEAIKQAWFIASVSILPTALVAIPFGAVIAL 60

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      Q GAE F+     +  +RE G ++TA++I+G  GSA+ A++G+ KI EE+DA+
Sbjct: 61  QLGSLSKQIGAESFAGAASVLAVVREAGPIVTALLISGAGGSAMCADLGARKIREELDAM 120

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            T+G+D ++ L+ PR++A  +    L  + +   I G  I      D     + + F + 
Sbjct: 121 ETLGVDPIQRLVVPRMFAGAVVAFFLNGVVSAVGIAGGYIFNVYMQDGTPGSYLASFAAL 180

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             +A++ +  ++A        ++A   G         +G+ V   VV +  ++   + + 
Sbjct: 181 GQVADVVSAQLRAIVFGMVAALIACYLGMNAKGGPKGVGQAVNVSVVVNFMVLFAFNFVM 240

Query: 365 AIFYFAI 371
              YF +
Sbjct: 241 VALYFQL 247


>gi|258541792|ref|YP_003187225.1| ABC transporter permease [Acetobacter pasteurianus IFO 3283-01]
 gi|256632870|dbj|BAH98845.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-01]
 gi|256635927|dbj|BAI01896.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-03]
 gi|256638982|dbj|BAI04944.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-07]
 gi|256642036|dbj|BAI07991.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-22]
 gi|256645091|dbj|BAI11039.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-26]
 gi|256648146|dbj|BAI14087.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-32]
 gi|256651199|dbj|BAI17133.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256654190|dbj|BAI20117.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-12]
          Length = 261

 Score =  195 bits (497), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 125/264 (47%), Gaps = 7/264 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             +L   +G+  +  I  + + A       S         +  + FL + +      G  
Sbjct: 4   VLDLVARLGRATLSLIRAAGALAL---FAASGLSHIVRPPFYGRVFLSTFLE----TGFF 56

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PVV L +  +G VIA Q     +Q+ A+     ++ +   RE+G +L  +M+AGR G+
Sbjct: 57  SLPVVALTALFSGGVIALQSYTGFAQYHAQSAIAGIVVLAVTRELGPVLAGLMVAGRVGA 116

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ A+IG+M++ ++IDA+ T+  + ++ L++PR+ A +I+LPLL ++A+   + G   V 
Sbjct: 117 AMAAQIGTMRVTDQIDALTTLSTNPMKYLVAPRLLAGLIALPLLVLVADILGVAGGFTVA 176

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
                     + +   ++    ++  GL+KA      I ++    G+     +  +G   
Sbjct: 177 VVKLGFSAPAYITATLNSLKAIDVTVGLVKAALFGFLIALMGCYYGYNSKGGAEGVGSAT 236

Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370
           T  VV +  +++  D L    +F+
Sbjct: 237 TAAVVAASIMLLAFDYLLTDLFFS 260


>gi|261415260|ref|YP_003248943.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261371716|gb|ACX74461.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302327576|gb|ADL26777.1| putative membrane protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 261

 Score =  195 bits (496), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 69/263 (26%), Positives = 130/263 (49%), Gaps = 7/263 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
              +   +G+ + +F+N        +  +  N      +       L + + QM++VG++
Sbjct: 5   INKIAEGLGRAVRRFLNKVVGYVLFIWELFKNIPGAFTN-------LHTTVEQMHHVGIT 57

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PVV   S  TGA+++ Q A+Q       +F    +    + E+  +LTA+++AGR G+
Sbjct: 58  SIPVVFAASLATGAIMSWQLAYQFGDMIPMMFVGMAVGKSVMVELCPILTAMVLAGRIGA 117

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           ++ +E+G+M + E++DA + +GL+  + L++PR+ A +I LP+LTIL+ F  I+G   V 
Sbjct: 118 SMCSELGTMAVTEQLDAYKVLGLNPYKYLLAPRLIATVIMLPVLTILSIFIGIVGGYEVA 177

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
             Y ++ ++VFF          ++  GLIKA      I   A   GF     +  +GK  
Sbjct: 178 HLYKEVSWSVFFYGVRMFYQNWDLVVGLIKATLYGFFISSYACFFGFFTHSGAEGVGKST 237

Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369
              VV  ++ ++I     +    
Sbjct: 238 KATVVAGMTSILIGGFTLSKLLL 260


>gi|302525560|ref|ZP_07277902.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4]
 gi|302434455|gb|EFL06271.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4]
          Length = 267

 Score =  195 bits (496), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 58/245 (23%), Positives = 116/245 (47%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +    +G + + + E   + +K        I+Q ++     +    L++   GAVIA Q 
Sbjct: 17  AALTQVGRLATLSWEVLRAIFKRPFQFREWIQQCWFFASVTILPTALVAIPFGAVIALQL 76

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
               +Q GA+ F+    ++  +++   L+TA+++AG  GSA+ A+IG+ KI EEIDA+  
Sbjct: 77  GSLTTQIGAQSFTGAASALAIVQQASPLITALLVAGAGGSAVCADIGARKIREEIDAMEV 136

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +G++ ++ ++ PR+ A I+   LL  L +   ++G               + + F++ A 
Sbjct: 137 LGVNPIQRIVVPRVLAAIVVSVLLNGLVSVVGVLGGYFFNVVLQGGTPGAYLASFNALAQ 196

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           + +++   IKA       G+VA   G         +G  V   VV +  ++ +I+ +   
Sbjct: 197 VPDLWISEIKAFLYGFVAGVVAAFRGLNPAGGPKGVGDAVNQAVVITFLLLFLINVVLTA 256

Query: 367 FYFAI 371
            Y  +
Sbjct: 257 VYLKV 261


>gi|162146934|ref|YP_001601395.1| hypothetical protein GDI_1139 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|209543998|ref|YP_002276227.1| hypothetical protein Gdia_1852 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|161785511|emb|CAP55082.1| putative membrane protein [Gluconacetobacter diazotrophicus PAl 5]
 gi|209531675|gb|ACI51612.1| protein of unknown function DUF140 [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 261

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 60/266 (22%), Positives = 128/266 (48%), Gaps = 7/266 (2%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
           N+  +    +G+  +  +  + +        +S+        + ++ F  +L+     +G
Sbjct: 2   NAVLDFIAALGRAALNLVRTAGALTLFGAQALSH---LVRPPFYWRIFFGALVE----IG 54

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
              +PVV L +  +G VIA Q     +Q+  +     ++ +   RE+G +L  +M+AGR 
Sbjct: 55  FFSLPVVALTALFSGGVIALQSYTGFAQYHVQSAIAGIVVLAVTRELGPVLAGLMVAGRV 114

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           G+A+ AEIG+M++ ++IDA+ T+  + ++ L++PR+ A  ++LP L ++A+   ++G   
Sbjct: 115 GAAMAAEIGTMRVTDQIDALTTLSTNPMKYLVTPRLLAGTLALPCLVLVADILGVLGGFT 174

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
           V     D    V+ +   +     ++  GL+KA      I ++    G+     +  +G 
Sbjct: 175 VSVAKLDFSAPVYIAATFAAVKPIDVTVGLVKAGVFGFLIALMGCYHGYNSRGGAEGVGA 234

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370
             T  VV +  +++  D L    +F+
Sbjct: 235 ATTAAVVAASILLLASDYLLTDVFFS 260


>gi|330991409|ref|ZP_08315360.1| putative ABC transporter permease protein [Gluconacetobacter sp.
           SXCC-1]
 gi|329761428|gb|EGG77921.1| putative ABC transporter permease protein [Gluconacetobacter sp.
           SXCC-1]
          Length = 261

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 60/266 (22%), Positives = 130/266 (48%), Gaps = 7/266 (2%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
           N   +    +G+ ++  +  +   A      +S+        + ++    +L+     +G
Sbjct: 2   NGVLDFVAGLGRAVLDIVRMAGKVALFAARALSHV---VRPPFYWRILWGTLVE----IG 54

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
              +PVV L +  +G VIA Q     +Q+ A+     ++ +   RE+G +L  +M+AGR 
Sbjct: 55  FFSLPVVALTALFSGGVIALQSYTGFAQYHAQNAIAGIVILAVTRELGPVLAGLMVAGRV 114

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           G+A+ AEIG+M++ ++IDA+ T+  + ++ L++PR+ A  ++LP L ++A+   ++G   
Sbjct: 115 GAAMSAEIGTMRVTDQIDALSTLSTNPMKYLVTPRLVAGTLALPFLVLVADILGVLGGFT 174

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
           V     D   + + +   ++  + ++  GL+KA      I ++    G+     +  +G 
Sbjct: 175 VCVMKLDFSPSAYIAATIASLKVMDVTVGLVKAAIFGFLIALMGCYHGYNSRGGAEGVGA 234

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370
             T  VV +  +++  D L    +F+
Sbjct: 235 ATTAAVVAASILLLTFDYLLTDVFFS 260


>gi|261415153|ref|YP_003248836.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261371609|gb|ACX74354.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302325884|gb|ADL25085.1| putative ABC transporter, permease protein [Fibrobacter
           succinogenes subsp. succinogenes S85]
          Length = 260

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 7/263 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
                  IG+KIV  I        IL + +        +          ++++M  VGVS
Sbjct: 4   ILKPITWIGQKIVDAIAAVGECICILFITLKQFRYVHKNP-------SLIVKEMISVGVS 56

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +P++ + S  TG V      F+     ++ F       + L E+G LLTA++++GR GS
Sbjct: 57  SLPLLFVTSIFTGMVATIMAEFEFHNLVSDKFVGTAACKMVLIELGPLLTAIVLSGRVGS 116

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AE+GSMK  EE+ A   +GLD  R L  PR +A +  +P LT ++N  A+IG  IV 
Sbjct: 117 AVAAELGSMKEKEELSAYVVLGLDPYRYLAMPRFFAFLTMIPCLTAISNALALIGGWIVC 176

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
               DI    + +      +  +++ G+IK+      I ++A   G      ++ +G   
Sbjct: 177 VLALDITTYTYSTGMQYLFSNMDLWAGIIKSIVFGTIIFVLAYYHGTHSKPGAHGVGLAT 236

Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369
            + VV S  ++++ D +   F F
Sbjct: 237 MSVVVASCLMILVSDFILDAFMF 259


>gi|311741974|ref|ZP_07715784.1| ABC superfamily ATP binding cassette transporter membrane protein
           [Aeromicrobium marinum DSM 15272]
 gi|311314467|gb|EFQ84374.1| ABC superfamily ATP binding cassette transporter membrane protein
           [Aeromicrobium marinum DSM 15272]
          Length = 288

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 49/279 (17%), Positives = 112/279 (40%), Gaps = 2/279 (0%)

Query: 95  NQKPQRSFFYNSFKNLHYHIGKKIVKF--INDSCSQAHILGLVISNTGEFCASSYKFKGF 152
           + +P+              I ++ + F       S   ++G   +  G+   + +  +  
Sbjct: 7   SSRPEGDTPNEPTPPTRAEIEREALTFNPFAKVLSGFGLVGNFYNFCGKTFRTMFTRRPV 66

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           +  +++Q +++    +   I++S     +I  Q    L Q GA   +    ++  +REIG
Sbjct: 67  VDEIVQQAWFISSVSIMPAIMVSIPLCMIIVFQVNQLLIQIGAVDLAGAGAAVAVIREIG 126

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            +++ +++AG   +A+ A++G+ KI +EIDA+ T+G+D +  L+ PR+ A       L  
Sbjct: 127 PIVSVLVVAGAGATAVCADLGARKIRDEIDAMETLGIDPIHRLVVPRVIASTFIAVALNG 186

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           + +   + GA             +F           + +   +KA       G+     G
Sbjct: 187 MVSIVGLAGAYYFSVVLQGATPGLFIDGLTLLVGTPDFWASSLKAAIFGLLAGLAGCYLG 246

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
                    +G  V   VV +  ++   +++    +  +
Sbjct: 247 LNAKGGPKGVGDAVNQTVVLAFLMLFAANTVITTIFLQL 285


>gi|257054442|ref|YP_003132274.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Saccharomonospora viridis
           DSM 43017]
 gi|256584314|gb|ACU95447.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Saccharomonospora viridis
           DSM 43017]
          Length = 250

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 54/244 (22%), Positives = 110/244 (45%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
                G + +   +     ++        I+Q +++    +    L++   GAVI+ Q  
Sbjct: 1   MLRETGKLFALALDVARGVFRRPFQFREFIQQAWFIASVTILPTALVAIPFGAVISMQFG 60

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
               Q GA+ ++     +  +++   L+ A+++AG  GSAI A+IG+  I EEIDA+  +
Sbjct: 61  SLAKQLGAQSYTGAGSVLATVQQASPLVVALLVAGAGGSAICADIGARTIREEIDAMEVL 120

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+  V+ L+ PR+ A +    LL  + +   ++G         D     + + F + A L
Sbjct: 121 GVSAVQRLVVPRVLACMFVALLLNGMVSVIGVLGGYFFNVVLQDGTPGAYLASFSALAQL 180

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           ++++ G IKA        +VA   G         +G  V   VV +  ++ +++++  + 
Sbjct: 181 SDLWIGEIKALIFGFIAAVVAAYRGLNPPPGPKGVGDAVNQSVVITFLLLFVVNTVLTLI 240

Query: 368 YFAI 371
           Y  +
Sbjct: 241 YLQL 244


>gi|294632699|ref|ZP_06711258.1| YrbE family protein [Streptomyces sp. e14]
 gi|292830480|gb|EFF88830.1| YrbE family protein [Streptomyces sp. e14]
          Length = 254

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 104/247 (42%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G + +   E   + ++        + Q +++    +    L+S   GAVIA 
Sbjct: 2   ITGALRQTGRLFALAAEVGRAIFRRPFQAREFVEQFWFLASVTILPAALVSIPFGAVIAL 61

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      Q GA+ F+     +  +++   L+ A++I+G  GSAI A++GS  I EE+DA+
Sbjct: 62  QVGSLTQQLGAQSFTGGASVLAVVQQASPLIVALLISGAGGSAICADLGSRTIREELDAM 121

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  V+ L+ PR+ A +    LL  L +   I+G               + S F S 
Sbjct: 122 EVMGVSPVQRLVVPRVLAAMGVAVLLNGLVSVVGILGGYFFNVYLQHGTPGAYVSSFSSL 181

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A L +++    KA       GIVA   G         +G  V   VV +  ++  ++ + 
Sbjct: 182 AQLPDLYVSEFKALVFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMVI 241

Query: 365 AIFYFAI 371
              Y  I
Sbjct: 242 TGVYLQI 248


>gi|315927603|gb|EFV06934.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 194

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 81/194 (41%), Positives = 117/194 (60%)

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A Q A+QL+QFGA IF +DLM I   RE+  L+ A++IAGRS S+  A+IG MKI +
Sbjct: 1   MVLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITD 60

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EI A+ TMG      ++ PR+ AL++++PL+  +++  +IIG  +V     DI FA F  
Sbjct: 61  EIAAMNTMGFRSFEFIVIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLR 120

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           RF     + +IF GL KAP     IG++A   GF V   + S+G   T  VV +I  VI 
Sbjct: 121 RFREAVDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIA 180

Query: 360 IDSLFAIFYFAIGI 373
            D+LF++   + GI
Sbjct: 181 FDALFSVILTSTGI 194


>gi|327402880|ref|YP_004343718.1| hypothetical protein Fluta_0879 [Fluviicola taffensis DSM 16823]
 gi|327318388|gb|AEA42880.1| protein of unknown function DUF140 [Fluviicola taffensis DSM 16823]
          Length = 246

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 52/239 (21%), Positives = 106/239 (44%), Gaps = 1/239 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G          +   K++ F      +M  +G+  +P+V L+S   GAVIA Q A  + 
Sbjct: 7   IGKYFMMMYIVFSKPEKWRIFRRRFFEEMEIIGIKSIPIVALMSAFMGAVIALQTASNMD 66

Query: 192 QFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
                 +    +     + E    + ++++AG+ GS I +E+G+M++ E+IDA+  MG++
Sbjct: 67  NPLLPAYTVGFITRSSTILEFSPTIISLILAGKVGSNIASEVGTMRVTEQIDALEIMGVN 126

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
            +  L+ P++ + +I  P+L I +   ++IG  + +          +          ++I
Sbjct: 127 SLSYLVLPKVTSAMIFFPILIIFSIGLSLIGGWLSLQLSGLSSTEEYVYGIRFFFKGSDI 186

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              L K    A  I  +A  +G+     +  +GK  T  VV +   ++I +      + 
Sbjct: 187 IYALGKTVVFAFLITSIASFKGYYTKGGALDVGKSSTEAVVSASVAILISNFFLTQMFL 245


>gi|42524770|ref|NP_970150.1| ABC transporter, permease protein [Bdellovibrio bacteriovorus
           HD100]
 gi|39576980|emb|CAE78209.1| ABC transporter, permease protein [Bdellovibrio bacteriovorus
           HD100]
          Length = 262

 Score =  193 bits (492), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 61/251 (24%), Positives = 129/251 (51%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           F          +G V   + +    +   + +   +  Q+Y +G+  +P++++ +   G 
Sbjct: 8   FTVFMMEVLFFIGGVGLLSRDVFRETIHGRIYYKLISEQIYQIGMRSLPLIVITAVSIGM 67

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V++ Q    L +FG +++   L+++  LRE+G + T++M+A R G+ I +EIGSM + ++
Sbjct: 68  VMSLQFGMGLEKFGGKLYVPKLLAVTILREMGPVFTSLMLAARVGAGIASEIGSMVVTQQ 127

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDAIR +G   ++ ++ PR+ A +I+LP+L  +AN    +G  I+     ++    ++ +
Sbjct: 128 IDAIRALGTSPIKKIVIPRVLACLITLPILVSIANIVGNLGGLIIGATELNLDPNFYYLK 187

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             +T+ + +  +G  K  F A  I I +   G  V   +  +G   T  VV S  ++++ 
Sbjct: 188 VMTTSNIQDYLSGFAKTFFFAIFIAIPSCYFGLNVKAGTKEVGIATTKAVVVSSILIVVG 247

Query: 361 DSLFAIFYFAI 371
           D   +  ++ +
Sbjct: 248 DFFLSKLFWIV 258


>gi|295088056|emb|CBK69579.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Bacteroides xylanisolvens
           XB1A]
          Length = 235

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 60/235 (25%), Positives = 112/235 (47%), Gaps = 1/235 (0%)

Query: 137 SNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE 196
              G   +   + + F    + ++  +GV+ + +V+LISF  GAVI  Q    +      
Sbjct: 1   MLMGRTFSRPERMRMFFRQYLNELEQLGVNSIGIVLLISFFIGAVITIQIKLNIESPWMP 60

Query: 197 IFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
            +++  ++  + L E    +  +++AG+ GS I +E+G+M++ ++IDA+  MG++    L
Sbjct: 61  RWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGINSANYL 120

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           I P+I A++  +P+L   + F+ IIGA    W    +                 I+ G+I
Sbjct: 121 ILPKITAMVTVIPILVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQYMFVEWFIWAGII 180

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           K+ F A  I  V+   G+ V   S ++GK  T  VV S  +++  D +       
Sbjct: 181 KSLFFAFIIASVSAFFGYTVDGGSIAVGKASTDAVVSSSVLILFADLILTKLLMG 235


>gi|330996070|ref|ZP_08319964.1| hypothetical protein HMPREF9442_01039 [Paraprevotella xylaniphila
           YIT 11841]
 gi|329574067|gb|EGG55645.1| hypothetical protein HMPREF9442_01039 [Paraprevotella xylaniphila
           YIT 11841]
          Length = 248

 Score =  193 bits (491), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 62/241 (25%), Positives = 104/241 (43%), Gaps = 1/241 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
               G  +   G   +   + + F    I++M  +GV  + +V+LISF  GAVI  Q   
Sbjct: 7   LATFGRYLMLMGRTFSRPERMRMFFKQYIKEMSQLGVDSIGIVLLISFFIGAVICIQIKL 66

Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +       F        + L E    +  +++AG+ GS I +EIG+M++ ++IDA+  M
Sbjct: 67  NIQSPWMPKFVTGYTTREIMLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALEIM 126

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    LI P++  ++  +P L   + FS  +GA         I               
Sbjct: 127 GVNSANYLILPKVLGMMTMMPFLVCFSIFSGFVGAYATSIIGQVITMDDLTLGLQHDFNE 186

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             ++ G IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D L    
Sbjct: 187 WYVWMGFIKSIFFAFVITSVSAFYGYTVEGGSVEVGKASTDSVVSSSVLILFSDVLLTQL 246

Query: 368 Y 368
            
Sbjct: 247 L 247


>gi|297191127|ref|ZP_06908525.1| ABC transporter integral membrane protein [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|197721749|gb|EDY65657.1| ABC transporter integral membrane protein [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 272

 Score =  193 bits (491), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 57/251 (22%), Positives = 105/251 (41%), Gaps = 9/251 (3%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVILIS 175
           + +   Q    G  ++ TG       ++K   L L+ ++ +      V    V V+  +S
Sbjct: 12  LEELGRQLVFYGRSLAWTGRTLR---RYKKETLRLLAEVSFGRGALAVVGGTVGVIAFLS 68

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
           F TG  +  QG   L+Q G   F   L +    REI  L+  + ++   G+   A++G+M
Sbjct: 69  FFTGTEVGLQGYAALNQLGTSNFVAFLSAYFNTREIAPLVAGLALSATVGAGFTAQLGAM 128

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           +I+EE DA+  MG+  +  L++ R+ A  +++  L ++   S+   A  +   YY     
Sbjct: 129 RISEETDALEVMGVPSLPFLVTTRMIAGFVAVIPLYVVGLLSSYFAARTITTGYYGQSAG 188

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            +   F       ++     K    A  I +V    G+        +G  V   V  SI 
Sbjct: 189 TYDHYFQQYLPPVDVLWSFGKVIVFAVVIILVHCYYGYYASGGPAGVGVAVGRAVRTSIV 248

Query: 356 IVIIIDSLFAI 366
            + I+D   ++
Sbjct: 249 AINILDFFLSL 259


>gi|329942978|ref|ZP_08291752.1| hypothetical protein G5Q_0652 [Chlamydophila psittaci Cal10]
 gi|313848135|emb|CBY17136.1| putative permease component of ABC transporter [Chlamydophila
           psittaci RD1]
 gi|325506979|gb|ADZ18617.1| putative permease component of ABC transporter [Chlamydophila
           psittaci 6BC]
 gi|328814525|gb|EGF84515.1| hypothetical protein G5Q_0652 [Chlamydophila psittaci Cal10]
 gi|328914810|gb|AEB55643.1| ABC transporter, permease protein, putative [Chlamydophila psittaci
           6BC]
          Length = 261

 Score =  193 bits (491), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 68/253 (26%), Positives = 116/253 (45%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           +     C     LG  +  T     S    K    S+  Q Y +GV+ +PVV+L   VTG
Sbjct: 8   RIFQILCVFPLELGRWMGFTCAVIKSFSWKKSLFRSISIQGYDIGVASLPVVMLTGAVTG 67

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A Q  +QL   G        +    L EIG +LTA+ ++GR G AI A +G+M++ E
Sbjct: 68  IVLALQSYYQLGIHGLSCAIGFFVVKSILVEIGPVLTALALSGRVGGAISAFLGTMRMTE 127

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++ A+ T+G++ +     PRI A I+++P L I A +S I    ++    + +   V+  
Sbjct: 128 QVSAMETLGVNPLEYFALPRIIAGIMAMPALVIAAVWSGIFCGYLLCRYAFQLSAQVYLH 187

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                  L++I   ++K+      I  +A  +G         + K  T  VV S   ++ 
Sbjct: 188 MVSGNVFLSDIVMVIVKSLVFGFIITSLACYQGLGKHCRITDVAKVTTAGVVTSYISILF 247

Query: 360 IDSLFAIFYFAIG 372
            + +   F+  +G
Sbjct: 248 ANCVITAFFHVLG 260


>gi|254294304|ref|YP_003060327.1| hypothetical protein Hbal_1946 [Hirschia baltica ATCC 49814]
 gi|254042835|gb|ACT59630.1| protein of unknown function DUF140 [Hirschia baltica ATCC 49814]
          Length = 264

 Score =  193 bits (491), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 67/268 (25%), Positives = 125/268 (46%), Gaps = 7/268 (2%)

Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
           +  N    IG+ ++    +       +G +   T     +      +L  ++RQ   +G 
Sbjct: 4   ALFNPFAAIGRAVLGTAAE-------IGRLAIFTARTVWACITPTIYLREVVRQCIQIGF 56

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             +PVV L +   GA +A       S+F AE F  +++ +   RE+G     +M+AGR G
Sbjct: 57  FSLPVVGLTAVFIGAALALNIYMGGSRFNAEQFVPNIVVLGITRELGPAFAGLMLAGRVG 116

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           + I AEIG+M++ E+IDA+ T+     R L +PR+ A  I+LP L ++A+   ++G  +V
Sbjct: 117 AGIAAEIGAMRVTEQIDALHTLSAKPERYLFAPRVIAATITLPALVLIADIIGVMGGWLV 176

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                D    ++        T+ ++ +GLIKA      I I+   +G      +  +G+ 
Sbjct: 177 SVGALDFNSTIYLRNTLDFMTINDVLSGLIKAGVFGAIIAIMGCYQGTNSKGGAGGVGRA 236

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAIGI 373
            T  VV    +++  + +    +  +G+
Sbjct: 237 ATLAVVSGAVLILASNYILTSIFVQVGL 264


>gi|123966718|ref|YP_001011799.1| putative transporter, membrane component [Prochlorococcus marinus
           str. MIT 9515]
 gi|123201084|gb|ABM72692.1| possible transporter, membrane component [Prochlorococcus marinus
           str. MIT 9515]
          Length = 251

 Score =  193 bits (490), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 58/238 (24%), Positives = 113/238 (47%), Gaps = 3/238 (1%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +   G+     +K K     L  Q+   G   + +V++     G V   Q A QL+  G 
Sbjct: 14  LIIGGQAINYIFKGKISKNDLFEQLMESGPGSLLIVLITGVAAGTVFNIQVASQLTSMGV 73

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
                 L+++   RE+  LLTA ++ G+  +A  A++G+MK+ E+I+AI  +  + ++ L
Sbjct: 74  SSEIGGLLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTEQIEAITMLRTEPIQYL 133

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS---TATLANIFT 312
           + PR+ ++II  P+  +L    A+    I    +Y++P +VF++   S   + + +++ +
Sbjct: 134 VVPRLLSMIIMSPIQCLLFLSVALWSGQIWSTIFYNVPPSVFWTSVRSGNVSLSSSDLSS 193

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            +IK+      I I+A   G         +G   T  VV ++  V ++D +     F 
Sbjct: 194 MIIKSVVFGLLISIIACGYGLTTKGGPKEVGTSTTGAVVMTLVTVSLMDVVLTQILFG 251


>gi|144898324|emb|CAM75188.1| ABC transporter permease protein [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 267

 Score =  193 bits (490), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 71/255 (27%), Positives = 134/255 (52%), Gaps = 2/255 (0%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           L   +G+   + +++    A +LG  +           +      S+  Q   +G++ +P
Sbjct: 9   LLERLGRAAARGLSEFGFAATLLGQSLYWL--VLGHWRRQPVRAASVAAQAMDIGIAALP 66

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ ++S   G ++A QG + L  FGAE      +++  +RE   L+T +++AGRSGSA+ 
Sbjct: 67  IITVLSTTIGLMLAIQGIYTLKTFGAESRVTLGVALSVVREFAPLITGILVAGRSGSALA 126

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A +G+M+IN+EID++  MG++ VR L++P + A+++ +PLLT+ A+   +  A + I   
Sbjct: 127 ARLGTMRINQEIDSLTVMGINPVRFLVAPPLAAMMVLMPLLTLWADLVGLFAAGLYISIE 186

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
                A +     S   L ++  GL K+      + IV +  G +V   +  +G+  T  
Sbjct: 187 LQGTMAGYADEVLSLLKLNDLLHGLAKSAIFGVLVTIVGVVNGASVSGGAEGVGRMTTRS 246

Query: 350 VVQSISIVIIIDSLF 364
           VV +IS ++I D +F
Sbjct: 247 VVHAISAIVITDMIF 261


>gi|39996027|ref|NP_951978.1| ABC transporter permease [Geobacter sulfurreducens PCA]
 gi|39982792|gb|AAR34251.1| ABC transporter, permease protein, putative [Geobacter
           sulfurreducens PCA]
          Length = 256

 Score =  193 bits (490), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 58/245 (23%), Positives = 118/245 (48%), Gaps = 1/245 (0%)

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
              S           +       ++  G+    + Q   +GV  + ++ L    TG V+A
Sbjct: 9   TVKSFLAEFQAFCVLSLRAVVRIFRRPGYYREFVIQFDKMGVGSLFIICLTGLFTGMVMA 68

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
            Q   QL  F A  +   ++++  ++E+G +L+++M+AGR GS+I AE+G+M + E++DA
Sbjct: 69  LQALIQLKPFAATSYVGGMVAVTMVKELGPVLSSLMVAGRVGSSITAELGTMVVTEQVDA 128

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R  G D V  L++ R+ AL++++P+L ++ +  A++G  I+    YDI   +++     
Sbjct: 129 MRVEGTDIVSRLVTSRLKALMLAMPMLALVTDAVALLGGYIIAAG-YDINLLMYWKSLPQ 187

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                ++  G++K       I ++    G +    +  +G      VV S  +V++ D  
Sbjct: 188 FMVFQDLIEGVMKPFVFGTLIALIGCYVGLSTSGGAEGVGTSAKRAVVLSSVMVLVADFF 247

Query: 364 FAIFY 368
               +
Sbjct: 248 MTKIF 252


>gi|162451968|ref|YP_001614335.1| putative ABC transport system permease protein [Sorangium
           cellulosum 'So ce 56']
 gi|161162550|emb|CAN93855.1| putative ABC transport system permease protein [Sorangium
           cellulosum 'So ce 56']
          Length = 296

 Score =  193 bits (490), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 70/268 (26%), Positives = 129/268 (48%), Gaps = 1/268 (0%)

Query: 99  QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158
             +      +         + +        A  +G +    G+  A     +      +R
Sbjct: 25  PPAPPVKRPRAPIAQEPSGVHQLGGSFLQIAATVGGMAVLAGKIAARVATLRVDGAEFMR 84

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
            +Y +GV  +P+V++ +  TGA++  Q A  + +FGA            LREI  LLTA+
Sbjct: 85  NLYRMGVKSMPIVVVTALFTGAIMVIQAAPLVERFGAHGLLGWGAGFGTLREIAPLLTAL 144

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           MI GR G+   AE+G+M + E+IDA+R + +D V  LI+PR  A++++L L  I A+  A
Sbjct: 145 MINGRVGANNTAELGTMVVTEQIDALRVLAIDPVSFLIAPRFLAMVLTLLLSVIFADALA 204

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHS-TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           ++GA++       +  AVF++   S    + ++ +GL+K+      + + + + G  V  
Sbjct: 205 LLGAALTGDLLLGVAPAVFYNGLTSGLLDIGDVMSGLVKSVVFGVVLALSSCQYGLGVTG 264

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            +  +G+ V   VV S + + I+D   +
Sbjct: 265 GAPGVGRAVNATVVASAAGIFILDYFVS 292


>gi|307634769|gb|ADI83773.2| transporter membrane protein of unknown function DUF140 [Geobacter
           sulfurreducens KN400]
          Length = 256

 Score =  192 bits (489), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 57/245 (23%), Positives = 117/245 (47%), Gaps = 1/245 (0%)

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
              S           +       ++   +    + Q   +GV  + ++ L    TG V+A
Sbjct: 9   TVKSFLAEFQAFCVLSLRAVVRIFRRPSYYREFVIQFDKMGVGSLFIICLTGLFTGMVMA 68

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
            Q   QL  F A  +   ++++  ++E+G +L+++M+AGR GS+I AE+G+M + E++DA
Sbjct: 69  LQALIQLKPFAATSYVGGMVAVTMVKELGPVLSSLMVAGRVGSSITAELGTMVVTEQVDA 128

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R  G D V  L++ R+ AL++++P+L ++ +  A++G  I+    YDI   +++     
Sbjct: 129 MRVEGTDIVSRLVTSRLKALMLAMPMLALVTDAVALLGGYIIAAG-YDINLLMYWKSLPQ 187

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                ++  G++K       I ++    G +    +  +G      VV S  +V++ D  
Sbjct: 188 FMVFQDLIEGVMKPFVFGTLIALIGCYVGLSTSGGAEGVGTSAKRAVVLSSVMVLVADFF 247

Query: 364 FAIFY 368
               +
Sbjct: 248 MTKIF 252


>gi|312888399|ref|ZP_07747975.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM
           18603]
 gi|311299233|gb|EFQ76326.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM
           18603]
          Length = 243

 Score =  192 bits (489), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 61/243 (25%), Positives = 116/243 (47%), Gaps = 1/243 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
             + LG  I           KF  +   ++R+M  +G+  + ++ +IS   GAV   Q A
Sbjct: 1   MLYHLGRYILLMKLSFKRPEKFSVYWAEVMREMVSIGLGSLGIISIISVFIGAVATIQTA 60

Query: 188 FQL-SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           FQL S F  +     +     + E    ++A+++AGR GS+I ++IG+M++ E+IDA+  
Sbjct: 61  FQLVSDFIPKTIVGTITRDSTILEFSPTISALVLAGRVGSSIASQIGTMRVTEQIDALEI 120

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG++    LISP+I + ++ +PLLT+++    ++G  I      ++  A + +       
Sbjct: 121 MGVNAPGYLISPKIISGVLMIPLLTVISISLGLLGGYIACAASSEVSTADYITGLTDGFK 180

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
              +   ++KA F    I  +   +GF     +  +G+  T  VV S   ++  D + + 
Sbjct: 181 TIILQVSMVKATFFGFIITSICAYQGFYTSGGALEVGQSATRGVVFSCIFILFADLVISR 240

Query: 367 FYF 369
              
Sbjct: 241 LML 243


>gi|84494808|ref|ZP_00993927.1| putative ABC transporter integral membrane protein [Janibacter sp.
           HTCC2649]
 gi|84384301|gb|EAQ00181.1| putative ABC transporter integral membrane protein [Janibacter sp.
           HTCC2649]
          Length = 276

 Score =  192 bits (488), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 55/239 (23%), Positives = 103/239 (43%), Gaps = 9/239 (3%)

Query: 137 SNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---------VPVVILISFVTGAVIAQQGA 187
                   S    + +   ++R +  V +           V V+  ++F TG+ +  QG 
Sbjct: 25  FYVRSIAWSPRTIRRYKKEILRLLAEVSLGSGALSVIAGTVGVLTFMAFFTGSQVGLQGY 84

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L+Q G   F+  L + L  REI  L+  + +A   G    A++G+M+I+EE+DA+  M
Sbjct: 85  SSLNQLGTGAFAGFLAAYLNTREIAPLVAGLSLAATVGCGFTAQLGAMRISEEVDALEVM 144

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+  +  L++ R+ A  I++  L ++   S+      ++  Y+      +   FH     
Sbjct: 145 GIPSLPFLVTTRMIAGFIAVIPLYVIGLLSSYAATRFIVTDYFGQSKGTYDHYFHLFLPP 204

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
            +IF   +K    A  I ++    G+        +G  V   V  SI  V ++D  F++
Sbjct: 205 IDIFYSFLKVLVFAVIIILIHCYYGYTASGGPAGVGVAVGKAVRTSIVAVNLVDFFFSL 263


>gi|29832443|ref|NP_827077.1| ABC transporter integral membrane protein [Streptomyces avermitilis
           MA-4680]
 gi|29609562|dbj|BAC73612.1| putative ABC transporter permease protein [Streptomyces avermitilis
           MA-4680]
          Length = 267

 Score =  192 bits (488), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 58/262 (22%), Positives = 111/262 (42%), Gaps = 9/262 (3%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPV 170
            ++  + +  SQ    G  ++ TG       ++K  +L L+ ++ +      V    V V
Sbjct: 2   ALLNRLEELGSQLSFYGRSLAWTGRTVR---RYKKEILRLLAEVSFGRGALAVVGGTVGV 58

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           +  +SF TG  +  QG   L+Q G   F   L +    REI  L+  + ++   G+   A
Sbjct: 59  IAFLSFFTGTEVGLQGYAALNQLGTSNFVAFLSAYFNTREIAPLVAGLALSATVGAGFTA 118

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           ++G+M+I+EE DA+  MG+  +  L++ R+ A  +++  L ++   S+   A  +   YY
Sbjct: 119 QLGAMRISEETDALEVMGVPSLPFLVTTRMIAGFVAVIPLYVVGLLSSYFAARTITTGYY 178

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
                 +   F       ++     K    A  I +V    G+        +G  V   V
Sbjct: 179 GQSAGTYDHYFQQYLPPVDVLWSFGKVLVFAVLIILVHCFYGYYASGGPAGVGVAVGRAV 238

Query: 351 VQSISIVIIIDSLFAIFYFAIG 372
             SI  + ++D   ++  +  G
Sbjct: 239 RTSIVAINVLDFFLSLAIWGAG 260


>gi|298372676|ref|ZP_06982666.1| membrane protein [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275580|gb|EFI17131.1| membrane protein [Bacteroidetes oral taxon 274 str. F0058]
          Length = 248

 Score =  192 bits (488), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 54/246 (21%), Positives = 104/246 (42%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G  +    +  ++   ++ F   L  ++  +G++ V +++LIS   G ++  
Sbjct: 2   VKKLLTTTGRYVQLMRQTFSAPDNWRVFWRQLPSEIEKLGINTVGIIVLISIFMGVIMTM 61

Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q            + +  ++    L E    + ++++AG+ GS I +EIG+M+I E+IDA
Sbjct: 62  QTVMNTENPMLPRYSTGLVLRDTLLLEFSSTIMSLLLAGKVGSNIASEIGTMRITEQIDA 121

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I  L+I +P+L  L+ F  + G   V      I  + F      
Sbjct: 122 LDIMGINSANYLILPKIIGLMICMPMLVTLSVFLGLAGGCGVAVFTDMITLSDFIYGIQY 181

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                     +IK+ F    I  V+   G+     +  +G+  T  VV S  + +  + L
Sbjct: 182 AFVPYYFTYSIIKSFFFGFIISSVSAFYGYYAYGGALDVGRASTNAVVNSSILTLAANVL 241

Query: 364 FAIFYF 369
                 
Sbjct: 242 LTQLLL 247


>gi|296139955|ref|YP_003647198.1| hypothetical protein Tpau_2250 [Tsukamurella paurometabola DSM
           20162]
 gi|296028089|gb|ADG78859.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM
           20162]
          Length = 267

 Score =  192 bits (488), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 51/256 (19%), Positives = 113/256 (44%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + + K      S     G++     +   ++++        I Q +++    +    L++
Sbjct: 6   RSVAKAAQGGTSALTQAGMIFQLFADIVRNTFRRPFQYREFIEQSWFIASVTILPTALVA 65

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              GA+++ Q    + Q GAE F+     +  +++   ++TA+++AG +GSA+ A++G+ 
Sbjct: 66  VPFGAIVSLQTGSLIGQLGAESFTGAASVLAVVQQGAPVVTALLVAGAAGSAVCADLGAR 125

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
            + EEI A+  +G++ V+ L+ PR+  +++    L  L +   ++G              
Sbjct: 126 TVREEIAAMEVLGINPVQRLVVPRVLGMMLVSMFLNGLVSVVGVVGGYFFNVVLQHGTPG 185

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            + + F + A L ++  G  KA       G+VA  +G   G     +G  V   VV +  
Sbjct: 186 AYLASFSALAQLPDLLVGEFKALVFGLIAGVVAAYKGLHPGGGPKGVGDAVNQSVVITFL 245

Query: 356 IVIIIDSLFAIFYFAI 371
           ++   + +    Y  +
Sbjct: 246 LLFFANIILTAVYLQV 261


>gi|255037710|ref|YP_003088331.1| hypothetical protein Dfer_3962 [Dyadobacter fermentans DSM 18053]
 gi|254950466|gb|ACT95166.1| protein of unknown function DUF140 [Dyadobacter fermentans DSM
           18053]
          Length = 242

 Score =  192 bits (488), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 59/242 (24%), Positives = 109/242 (45%), Gaps = 1/242 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             ++G      G       K   +   L+ +   +GVS + +V ++S   GAV   Q A+
Sbjct: 1   MSVIGKYFIFLGTLFGKGEKLSVYWRRLMEECVGIGVSSIFIVAIVSTFIGAVSCIQTAY 60

Query: 189 QLSQFGAEIFSIDLMSILQ-LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            L      I ++ L+     + E+   +T +++AG+ GS I +E+G+M+I E+IDA+  M
Sbjct: 61  NLVSPIIPISTVALIVRDMEILELAPTITCIVLAGKVGSNIASELGTMRITEQIDALEVM 120

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    L+ P++ A +++ P+L I + F  I+G  +       I    +      +   
Sbjct: 121 GINSSSYLVLPKVVAAMLTFPMLVIFSAFLGILGGYLAGTLTGVITERDYLYGIRDSFVP 180

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            NIF   +K       I  ++  +GF     +  +GK  T  V  S   +++ D L A  
Sbjct: 181 YNIFFMCVKPFVFGFLIASISSFKGFFTSGGALEVGKASTQAVTNSCISILVADYLLAQL 240

Query: 368 YF 369
             
Sbjct: 241 LL 242


>gi|89898182|ref|YP_515292.1| ABC transporter [Chlamydophila felis Fe/C-56]
 gi|89331554|dbj|BAE81147.1| ABC transporter [Chlamydophila felis Fe/C-56]
          Length = 261

 Score =  192 bits (488), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 68/253 (26%), Positives = 117/253 (46%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           +      +    LG  +  T     S    K  L S   Q Y +GV+ +PVV+L   VTG
Sbjct: 8   RIFRILYTFPLELGRWMGFTYAVIKSFSWKKSLLRSTSMQGYDIGVASLPVVMLTGAVTG 67

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A Q  +QL   G        +    L EIG +LTA+ ++GR G AI A +G+M++ E
Sbjct: 68  IVLALQSYYQLGIHGLSCAIGFFVVKSILVEIGPVLTALALSGRVGGAISAFLGTMRMTE 127

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++ A+ T+G++ +     PRI A II++P L I A ++ I    ++    + +P  V+  
Sbjct: 128 QVSAMETLGVNPLEYFALPRIIAGIIAMPALVIAAVWAGIFCGYLLCRCAFQLPAHVYLH 187

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                  +++I   ++K+      I  +A  +G         + K  T  VV S   ++ 
Sbjct: 188 MVSGNVLISDIVMVIVKSLVFGFIITSLACYQGLGKHCRIMDVAKVTTAGVVTSYISILF 247

Query: 360 IDSLFAIFYFAIG 372
            + +   F+  +G
Sbjct: 248 ANCVITTFFHLLG 260


>gi|317125893|ref|YP_004100005.1| hypothetical protein Intca_2777 [Intrasporangium calvum DSM 43043]
 gi|315589981|gb|ADU49278.1| protein of unknown function DUF140 [Intrasporangium calvum DSM
           43043]
          Length = 282

 Score =  191 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 53/270 (19%), Positives = 109/270 (40%), Gaps = 9/270 (3%)

Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162
              +       +  +  + +    +Q       ++ +G       ++K  ++ L+ ++  
Sbjct: 3   PVQAVSRPLARLAGRPGRGLESLGAQMRFYVRSLAWSGRTVR---RYKKEVVRLLAEVSL 59

Query: 163 ------VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
                 V    V V+  ++F TG  +  QG   L Q G   F+    +    REI  L+ 
Sbjct: 60  GTGALSVIGGTVGVIAFMAFFTGTEVGLQGYSALEQLGTGAFTGFFSAYFNTREIAPLVA 119

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
            + +A   G    A++G+M+I+EE+DA+  MG+  +  L++ R+ A  +++  L ++   
Sbjct: 120 GLALAATVGCGFTAQLGAMRISEEVDALEVMGVPSLPYLVTTRMIAGFVAVVPLYVIGLL 179

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           S+      +   Y+      +   FH      +IF    K    A  I ++    G+   
Sbjct: 180 SSYAATRFIATTYFGQSEGTYDHYFHLFLPPGDIFWSFGKVMVFAVVIILIHCYYGYTAS 239

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
                +G  V T V  SI  + ++D   ++
Sbjct: 240 GGPAGVGVAVGTAVRTSIVAINVVDFFLSL 269


>gi|285016849|ref|YP_003374560.1| ABC transporter permease [Xanthomonas albilineans GPE PC73]
 gi|283472067|emb|CBA14574.1| putative abc transporter permease abc transporter, permease protein
           [Xanthomonas albilineans]
          Length = 249

 Score =  191 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +    LG            S   +  L  LIR++Y VG   +P++ +     G V+  
Sbjct: 3   MAASIRALGRAGLFFLTVLRGSLPSRDLLAELIREIYKVGARSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ +GA      L+ +   RE+  +LTA++  GR+GS+I AE+G M+  ++I A+
Sbjct: 63  QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D V   ++PR WA ++++PLLT +    AI  +         +    F+S   S+
Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGIFCSLAISASYFEAIGALGLDRGTFWSALSSS 182

Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +    ++K+        +VA   GF             T  VV +  +V++ + +
Sbjct: 183 VDFWADFGVAMLKSAVFGGTAALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242

Query: 364 FAIFYF 369
            +   F
Sbjct: 243 MSALLF 248


>gi|226349637|ref|YP_002776751.1| putative YrbE family protein [Rhodococcus opacus B4]
 gi|226245552|dbj|BAH55899.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 266

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 104/253 (41%)

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
           G++  K           +G   + + E     +K    L   ++Q +++    +   +L+
Sbjct: 11  GERSAKARAALRVAPRAVGAFYATSLETYRCMFKRPFHLREFLQQAWFIASVSIMPALLM 70

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           +     +   Q    L++ GA   +     +  +REIG ++T +++AG   +AI A++GS
Sbjct: 71  AIPFCMMFVYQINILLAEIGAVDLAGAGAGVAIVREIGPIVTVLVVAGAGSTAICADLGS 130

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
             I EEIDA++ +G+D +  L  PR+ A       L  L +   ++G  I          
Sbjct: 131 RTIREEIDAMKVLGIDPIHRLCVPRVLASTFIAIFLNGLVSAVGLVGGYIATVYMQGASP 190

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
             + +       L + F   IKA       G+VA   G  V      +G  V   VV S 
Sbjct: 191 GQYVTAISIITGLGDFFVAEIKAAVFGMLAGLVACHLGLNVRGGPKGVGDAVNQTVVFSF 250

Query: 355 SIVIIIDSLFAIF 367
            ++ + +S+    
Sbjct: 251 LLLFLANSIITTL 263


>gi|258546129|ref|ZP_05706363.1| membrane protein [Cardiobacterium hominis ATCC 15826]
 gi|258518554|gb|EEV87413.1| membrane protein [Cardiobacterium hominis ATCC 15826]
          Length = 263

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 66/266 (24%), Positives = 125/266 (46%), Gaps = 9/266 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             +    +G   +  +            ++ +               L  +R  Y  GV 
Sbjct: 4   VSDFLAAVGATTLACLAALGDFCLFALALLRHVAILLRKP-------LLTLRATYAAGVL 56

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +P++++     G V++ Q    + +FGAE     ++++  LRE+G +++A++ AGR+GS
Sbjct: 57  SLPIILVAGLFVGMVLSFQAYTTMVRFGAEQALGTMVALSLLRELGPVVSALLFAGRAGS 116

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           AI AEIG MK  E++ A+  M ++ V  +  PR      +LPLLTIL    AIIGA +V 
Sbjct: 117 AITAEIGLMKTTEQLVAMEMMAIEPVAQVGVPRFLGAWFALPLLTILFVAVAIIGAHLVG 176

Query: 287 WKYYDIPFAVFFSRFHSTATL-ANIFTGL-IKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
             Y  +   +F+S   ++    +++  G+ +K+         +A+ +GF+    ++ + +
Sbjct: 177 VVYLGLDDGIFWSGMQNSVDFGSDVVRGMLLKSLVFGWVCAAIAVFQGFSSLPTASGMSR 236

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370
             TT VV S   V+ ++ +     F 
Sbjct: 237 ATTTTVVMSSLAVLGLNFVLTAMLFG 262


>gi|198276177|ref|ZP_03208708.1| hypothetical protein BACPLE_02366 [Bacteroides plebeius DSM 17135]
 gi|198270989|gb|EDY95259.1| hypothetical protein BACPLE_02366 [Bacteroides plebeius DSM 17135]
          Length = 247

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 63/240 (26%), Positives = 111/240 (46%), Gaps = 1/240 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  +   G   +   +F+ +    + +M  +G++ + +V+LISF  GAVI  Q    + 
Sbjct: 8   LGKYLMLMGRVFSRPERFRMYFKQYLNEMVQLGINSIGIVLLISFFIGAVICIQIKLNIE 67

Query: 192 QFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
                 F +   +  + L E    +  +++AG+ GS I +EIG+M++ ++IDA+  MG++
Sbjct: 68  SPWMPRFVVGYTTREILLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALEIMGVN 127

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
               LI P+I  L+  +P L I + F+ +IGA    W    +                 I
Sbjct: 128 SASYLILPKILGLMTMIPFLVIFSIFAGVIGAFCTAWFAGIMNATDLEYGLQYCFVEWYI 187

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +   IK+ F A  I  V+   G+ V   S ++GK  T  VV S  +++  D +       
Sbjct: 188 WCSFIKSLFFAFIIASVSAYFGYTVEGGSIAVGKASTDSVVSSSVLILFSDLILTQLLMG 247


>gi|62185216|ref|YP_220001.1| putative permease component of ABC transporter [Chlamydophila
           abortus S26/3]
 gi|62148283|emb|CAH64049.1| putative permease component of ABC transporter [Chlamydophila
           abortus S26/3]
          Length = 261

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 70/253 (27%), Positives = 117/253 (46%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           +     C     LG  +  T     S    K    S+  Q Y +GV+ +PVVIL   VTG
Sbjct: 8   RIFQILCVFPLELGRWMGFTCAVIKSLSWKKSLFRSVNIQGYDIGVASLPVVILTGAVTG 67

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A Q  +QL   G        +    L EIG +LTA+ ++GR G AI A +G+M++ E
Sbjct: 68  IVLALQSCYQLGIHGLSCAIGFFVVKSILVEIGPVLTALALSGRVGGAISAFLGTMRMTE 127

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++ A+ T+G++ +     PRI A  I++P L I A +S I G  ++    + +P  V+  
Sbjct: 128 QVSAMETLGVNPLAYFALPRIIAGTIAMPALVIAAVWSGIFGGYLLCRYAFQLPAQVYLH 187

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                  +++I   ++K+      I  +A  +G         + K  T  VV S   ++ 
Sbjct: 188 MVSGNVFISDIVMVIVKSLVFGFIITSLACYQGLGKHCRITDVAKVTTAGVVTSYISILF 247

Query: 360 IDSLFAIFYFAIG 372
            + +   F+  +G
Sbjct: 248 ANCVITAFFHVLG 260


>gi|226229261|ref|YP_002763367.1| putative transporter [Gemmatimonas aurantiaca T-27]
 gi|226092452|dbj|BAH40897.1| putative transporter [Gemmatimonas aurantiaca T-27]
          Length = 275

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 55/267 (20%), Positives = 114/267 (42%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
                 L   +  +I      +      +G       +   ++     +L         +
Sbjct: 4   PREPAGLPERLHDRITALGGVTRRLIEPIGTGARFVRDVARATKDTAQWLPEFSTHARVL 63

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           GV  +P+ I I+  TG V+A   ++ +       F   L+      E+  +LT + +AGR
Sbjct: 64  GVDSLPIGIFIALFTGIVLALLASYSVGDLVPPYFVGTLVQKTITLELAPVLTGLALAGR 123

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
            G+ I AE+G+M++ E+IDA+ T+  D +  L+ PR+ A  +  P++  +A    ++   
Sbjct: 124 VGANIAAELGTMRVTEQIDALETLTFDPMSHLVVPRVLASALMFPIVVGMAMLVGLLSGW 183

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           +      DI    F           ++  GL+K+     A+ ++  + G      +  +G
Sbjct: 184 VASIVLLDIATPQFLKGVRLFFQPFDVQYGLVKSASFGAAVALIGCRAGLNTLGGAQGVG 243

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  T  VV S  +++++D+ +AI + +
Sbjct: 244 RSATRAVVISAVMILVLDAFWAIVWLS 270


>gi|226364103|ref|YP_002781885.1| YrbE family protein [Rhodococcus opacus B4]
 gi|226242592|dbj|BAH52940.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 264

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 51/236 (21%), Positives = 99/236 (41%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G   + + E     +K        ++Q +++    +   +L++     +   Q    L+
Sbjct: 26  VGAFYATSMETVRCMFKRPFHAREFVQQAWFIAGVSIMPALLMAIPFCMMFVYQINILLA 85

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + GA   S     +  +REIG ++T +++AG   +AI A++GS  I EEIDA++ +G+D 
Sbjct: 86  EIGAVDLSGAGAGVAIIREIGPVVTVLVVAGAGSTAICADLGSRTIREEIDAMKVLGIDP 145

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           ++ L  PR+ A  +    L  L +   ++G  I            + +       L +  
Sbjct: 146 IQRLCVPRVLASTLIGMFLNGLVSAVGLVGGYIATVYMQGASPGQYVTAISILTGLPDFL 205

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
              +KA       G+VA   G         +G  V   VV S  ++ + +S+    
Sbjct: 206 VSEVKAAVFGMLAGLVACHLGLNAKGGPKGVGDAVNQTVVFSFLLLFLANSVITTL 261


>gi|218262319|ref|ZP_03476833.1| hypothetical protein PRABACTJOHN_02507 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223470|gb|EEC96120.1| hypothetical protein PRABACTJOHN_02507 [Parabacteroides johnsonii
           DSM 18315]
          Length = 248

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 63/244 (25%), Positives = 117/244 (47%), Gaps = 2/244 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
             H +G  +    +  +   ++  F   LI+++Y +GV  + +VI+IS   G VIA Q +
Sbjct: 4   ALHQVGEYVMLMAKCISVPNRWSMFFKQLIKEIYKLGVDSLWIVIIISIFIGTVIAIQIS 63

Query: 188 FQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
             +S      F+I   +  + L E    + ++++AG+ GS I +EIG+M++ E+IDA+  
Sbjct: 64  LNISSPLIPKFTIGYTTREIILLEFSSSIMSLILAGKVGSNIASEIGTMRVTEQIDAMEI 123

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY-DIPFAVFFSRFHSTA 305
           MG++    LI P++  ++  +P+L I + F+ I+G           +  A F        
Sbjct: 124 MGVNSANFLILPKMVGMMTFIPVLVIFSMFTGILGGIAASHSTGTGMTPASFEYGLQFYF 183

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
               I+  +IK+   A  I  +A   G+ V   +  +GK  T  VV S  ++++ D +  
Sbjct: 184 NEFYIWYSIIKSVVYAFIISSIAAYFGYNVKGGALEVGKASTNAVVMSSIMILLADVILT 243

Query: 366 IFYF 369
               
Sbjct: 244 NLML 247


>gi|269128029|ref|YP_003301399.1| hypothetical protein Tcur_3830 [Thermomonospora curvata DSM 43183]
 gi|268312987|gb|ACY99361.1| protein of unknown function DUF140 [Thermomonospora curvata DSM
           43183]
          Length = 267

 Score =  190 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 54/252 (21%), Positives = 105/252 (41%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           + +  +       GL+     E    ++  + +    I Q +++       V+LI+   G
Sbjct: 11  RVLRRAGKALDETGLLFVIFLEGLRRTWDVRTWWGEFIEQCWFIARVTSMPVLLIAIPLG 70

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           A I+ Q      Q GA+  +  L+    + ++  L +A++I+G  GSAI +++G+  I +
Sbjct: 71  ATISLQAGDIARQLGAQSGTGALVVANMITQVAPLASALLISGAGGSAITSDMGARNIRD 130

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+ A+  MG++ V  L++PR+WA      LL  +   S   G          +    +F 
Sbjct: 131 ELAAMEVMGINPVHRLVTPRLWAASTVAVLLCSVVILSGTAGGFYFNVIQQGVSPGAYFD 190

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
              S    +++   L KA         VA   G    +    +G+ V   VV +  +V  
Sbjct: 191 GATSLLQFSDLVVTLFKAWIFGFIAAAVACYAGMNCDLGPVGVGRAVNKAVVVTSILVFS 250

Query: 360 IDSLFAIFYFAI 371
            + +  + Y  +
Sbjct: 251 ANYVITMLYQVL 262


>gi|254423231|ref|ZP_05036949.1| conserved domain protein [Synechococcus sp. PCC 7335]
 gi|196190720|gb|EDX85684.1| conserved domain protein [Synechococcus sp. PCC 7335]
          Length = 291

 Score =  190 bits (483), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 55/234 (23%), Positives = 106/234 (45%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
           + +   G+      + +     ++  +   G   V  VI  +   G +   Q A ++S+F
Sbjct: 51  MALLLAGQVIHRLLRGRFGQRQIMDHLMSAGPRCVASVIATNVCAGLIFGIQTAREMSRF 110

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           GA        +     E+  +LTA ++A + GSA  AEI +MK+ ++IDA++ +  D + 
Sbjct: 111 GAVSSLGSAFAAGYCSELAPILTAGVLACQVGSAFAAEIAAMKLTQQIDALKMLRTDPID 170

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            L+ PR+ A  + LP+LT+LA    ++    +   YY +P   F        +++++   
Sbjct: 171 YLVMPRVIACAVMLPMLTVLALVCGVMSGGFLTTYYYHLPMGTFLDGVRGALSVSDVLLI 230

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           + KA      I I +   G    +H   +G+  T+ V+ +   +  ID + A  
Sbjct: 231 MGKAILFGLVIAIASCSRGLTSALHGKGVGQSATSAVMMAWIALFFIDLVIAFL 284


>gi|54027083|ref|YP_121325.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54018591|dbj|BAD59961.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 264

 Score =  190 bits (483), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 57/249 (22%), Positives = 114/249 (45%), Gaps = 4/249 (1%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +      ++  L +    +     ++++ F    I Q +++    +    L++   GAV+
Sbjct: 14  SGFAQAGNVFALFVDVLRKMFRRPFQWREF----IEQSWFIASVSILPSALVAIPFGAVV 69

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A Q    + Q GAE ++     +  +++   ++TA++IAG +GSA+ A++GS  I EEID
Sbjct: 70  ALQTGSLIKQLGAESYTGATSVLATVQQAAPVVTALIIAGAAGSAVAADLGSRTIREEID 129

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +G+D +  L+ PR+  + +   LL  L +   I G               + S F 
Sbjct: 130 AMEVLGVDPIARLVVPRVLGMTLVAVLLNGLVSVVGIAGGYFFNVLLQGGTPGAYLSSFS 189

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           + A L +++ G IKA       G++A  +G         +G  V   VV +  ++  ++ 
Sbjct: 190 ALAQLPDLWIGEIKAAIFGLLAGVIAAYKGLHPKGGPKGVGDAVNQSVVITFLVLFFVNL 249

Query: 363 LFAIFYFAI 371
           +  + Y  +
Sbjct: 250 ILTLVYLQV 258


>gi|296532685|ref|ZP_06895378.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Roseomonas cervicalis ATCC 49957]
 gi|296266987|gb|EFH12919.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Roseomonas cervicalis ATCC 49957]
          Length = 278

 Score =  190 bits (483), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 78/263 (29%), Positives = 139/263 (52%), Gaps = 3/263 (1%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
               IG   V  + D  +    LG  +  T        + +  +  L+R +   G+   P
Sbjct: 18  FVAGIGAWAVAVLRDVRAATGFLGEAVVMTLSLLPRPRRLR--VGDLLRHLDEAGLRAFP 75

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           + +L+  + G ++A Q +  + Q+GAEI+   L+ I  LRE+G L+ A+++AGR+GSA  
Sbjct: 76  LTLLLGLLIGVILAFQSSIPMRQYGAEIYIPSLVGISLLRELGPLIAAIILAGRTGSAFA 135

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AE+G+M +NEE+DA+R MG+D + +L+ PR+ A ++ +P+LT+L N S +IG    +   
Sbjct: 136 AELGTMTVNEEVDALRIMGIDPMVMLVLPRLIAAMLVMPVLTLLMNLSGLIG-MGTVMGA 194

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
              P A+  ++     TL  +  GL K+      +  +  + G + G    ++G   T  
Sbjct: 195 LGFPAALVINQLSYWLTLGTLLGGLGKSVVFGLVVAGIGCRAGLSAGRGPRAVGDAATAA 254

Query: 350 VVQSISIVIIIDSLFAIFYFAIG 372
           VV  I   +++D LFA+ ++ +G
Sbjct: 255 VVGGIVSTVVLDGLFAVLFYRLG 277


>gi|325104961|ref|YP_004274615.1| protein of unknown function DUF140 [Pedobacter saltans DSM 12145]
 gi|324973809|gb|ADY52793.1| protein of unknown function DUF140 [Pedobacter saltans DSM 12145]
          Length = 244

 Score =  190 bits (482), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 62/243 (25%), Positives = 111/243 (45%), Gaps = 1/243 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
                G  I           KF  +   + ++M Y+G+  + ++ +IS   GAV+  Q A
Sbjct: 2   FFSYFGKYILLLKAVFRKPEKFSLYWKEIAKEMVYIGIGSLALISIISVFVGAVMTLQIA 61

Query: 188 FQL-SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           FQL S F  +     +     + E+   + A+++AG+ GS+I +EIG+M++ E+IDA+  
Sbjct: 62  FQLVSDFIPKTIVGSVNRDSAILELSPTICALVLAGKIGSSISSEIGTMRVTEQIDALEI 121

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG++    LI P+I A I  +P+L  ++ F A++G  +       +  + +     +   
Sbjct: 122 MGINAPGYLILPKIIAGITMIPILVYISIFLALLGGYVGGVASGVVSSSDYIQGITTGFI 181

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
              +    +KA      I  VA  +GF V   +  +GK  T  VV S   ++  D +   
Sbjct: 182 PYTMAVAGVKAFIFGFIITSVASYQGFYVNGGALEVGKAGTKTVVISCIAILSADYIITE 241

Query: 367 FYF 369
              
Sbjct: 242 LML 244


>gi|289641747|ref|ZP_06473905.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
 gi|289508391|gb|EFD29332.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
          Length = 286

 Score =  189 bits (481), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 55/241 (22%), Positives = 110/241 (45%), Gaps = 2/241 (0%)

Query: 133 GLVISNTGEFCASSYKFK-GFLLSLIRQMYYV-GVSGVPVVILISFVTGAVIAQQGAFQL 190
           G ++   G+   S+ +   G+   +  QM+ +  +  +P+++  +         QG    
Sbjct: 38  GEMVQLAGQVFGSAIRHPVGYWGEVRDQMFEILKLCWIPMMVSCTAFGFGAPGLQGGNLF 97

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
             FG          +  +RE    + A+++AG  G+A+ A++G+ +I EEIDA+  +G+D
Sbjct: 98  LLFGIPERLGSFFIMASVREFAPWINAMVVAGVMGTAMTADLGARRIREEIDAMEVLGVD 157

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
            +R LI PR+ A+ +   LL ++A    ++G  +          + FF  F + AT+ ++
Sbjct: 158 PIRTLIVPRVLAITLMTGLLDLVALAFGVLGGYMASVWVLGANSSAFFENFFANATVTDV 217

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  + K       IG+V   +G         +G+ V   VV S + + I + +F      
Sbjct: 218 WASVAKTTIFGLLIGVVCCYKGLHTQGGPIGVGRAVNQAVVISFAAIWIFNYVFTTILLG 277

Query: 371 I 371
           +
Sbjct: 278 L 278


>gi|54027607|ref|YP_121849.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54019115|dbj|BAD60485.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 284

 Score =  189 bits (481), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 57/236 (24%), Positives = 102/236 (43%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           IS   E   + ++ +      +RQ  ++        +L++   G +++ Q      Q GA
Sbjct: 43  ISAVAELFIAIFRRRFPFDEFVRQCAFMANVAAAPTLLVAIPIGVIVSIQVGAVAGQVGA 102

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
             F      +  +++   L+T++MIAG  GSAI A++GS  I EEIDA++ MG+D +R L
Sbjct: 103 TSFIGAANGLGIVQQGAPLVTSIMIAGAVGSAICADLGSRTIREEIDAMKVMGVDPMRRL 162

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           ++PR+ A ++   LL     F   +   I            +   F S A   ++   L+
Sbjct: 163 VAPRLGAAMLVSVLLCGFVVFVGFLTGYIFNIFAQGGTPGSYIGTFSSFAVTRDLLVALV 222

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           K+        I+A   G         +   V + VV S  ++  ++      Y A+
Sbjct: 223 KSLIFGLLAAIIACDTGLNTRGGPGGVANSVNSAVVSSAIMLFGVNLGITQIYSAL 278


>gi|60683336|ref|YP_213480.1| hypothetical protein BF3899 [Bacteroides fragilis NCTC 9343]
 gi|60494770|emb|CAH09576.1| putative membrane protein [Bacteroides fragilis NCTC 9343]
 gi|301164825|emb|CBW24385.1| putative membrane protein [Bacteroides fragilis 638R]
          Length = 254

 Score =  189 bits (481), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 63/250 (25%), Positives = 116/250 (46%), Gaps = 1/250 (0%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           I         +G  I   G   +   + + F    I+++  +GV+ + +V+LISF  GAV
Sbjct: 5   IRVMIKALRTVGRYIMLMGRTFSRPERMRMFFRQYIKEIEQLGVNSIGIVLLISFFIGAV 64

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           I  Q    +       +++  ++  + L E    +  +++AG+ GS I +E+G+M++ ++
Sbjct: 65  ITIQIKLNIESPWMPRWTVGYVTREILLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQ 124

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+  MG++    LI P+I A++  +P+L   + F+ IIGA    W    +        
Sbjct: 125 IDALEIMGVNSANYLILPKITAMVTMIPILVTFSIFAGIIGAFATCWFGGIMTATDLEYG 184

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                    ++ G+IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  
Sbjct: 185 LQYMFVEWFVWCGIIKSLFFAFIIASVSSFFGYTVEGGSIEVGKASTDSVVSSSVLILFA 244

Query: 361 DSLFAIFYFA 370
           D +       
Sbjct: 245 DLVLTKLLMG 254


>gi|189347228|ref|YP_001943757.1| hypothetical protein Clim_1737 [Chlorobium limicola DSM 245]
 gi|189341375|gb|ACD90778.1| protein of unknown function DUF140 [Chlorobium limicola DSM 245]
          Length = 264

 Score =  189 bits (480), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 62/238 (26%), Positives = 114/238 (47%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           +      +      +     +  K K +    + Q    G   +P+V++ +   G+++A 
Sbjct: 17  AKDFLLTMQEFFLFSMRAFFTLPKLKRYWRDFLDQATICGTDSIPIVLVSAVSIGSLLAI 76

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           +    L  FGA+       SI  +RE+G LL  +M++ R GS   AE+G+MKI+E+IDA+
Sbjct: 77  EVGNLLEDFGAKTMLGRSTSISVIRELGPLLMGLMLSARFGSRNGAELGAMKISEQIDAL 136

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R  G D V  L+ PR+ A ++    LT L++F+ +  A+ +   Y+ +   +F++  +  
Sbjct: 137 RAFGTDPVAKLVMPRLAAALVMFIPLTALSDFAGLQSAAYLAEHYHHLDPGIFWNAVYPR 196

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               +   G  KAP  A  I +V+   GF     +  +G+     +V S  +V+I + 
Sbjct: 197 LGPKDFVVGFAKAPVFAIIITLVSSYNGFIAKGGTAGVGRATIKGIVVSSGLVLIANF 254


>gi|145219305|ref|YP_001130014.1| hypothetical protein Cvib_0490 [Prosthecochloris vibrioformis DSM
           265]
 gi|145205469|gb|ABP36512.1| protein of unknown function DUF140 [Chlorobium phaeovibrioides DSM
           265]
          Length = 264

 Score =  189 bits (480), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 63/245 (25%), Positives = 118/245 (48%), Gaps = 4/245 (1%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           + +  +   +        +     F     K + +    + Q    G   +P+V++ +  
Sbjct: 14  VYRLKDFFLTMQDFF---LFGVRSFLTIP-KIRRYWRDFLDQAKICGADSIPIVLVSAIS 69

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G+++A +    L  FGA+       SI  +RE+G LL  +M++ R GS   AE+G+MKI
Sbjct: 70  IGSLLAIEVGNLLEDFGAKTMLGRSTSISVIRELGPLLMGLMLSARFGSRNGAELGAMKI 129

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
           +E+IDA+R  G D +  L+ PR+ A +I    LT L++F+ +  A+ +   Y+ +   +F
Sbjct: 130 SEQIDALRAFGTDPIAKLVMPRLVAALIMFLPLTALSDFAGLYSAAYMAEHYHHLDPGIF 189

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
           ++  +    L +   G  KAP  A  I +V+   GF+    +  +G+     +V S  +V
Sbjct: 190 WNSVYPRLALKDFVVGFAKAPVFAVIITLVSSFNGFSASGGTAGVGRSTIKGIVVSSGLV 249

Query: 358 IIIDS 362
           +I + 
Sbjct: 250 LIANF 254


>gi|296179480|gb|ADG96485.1| SupA [Gordonia cholesterolivorans]
          Length = 257

 Score =  189 bits (480), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 53/247 (21%), Positives = 101/247 (40%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
            I  + +    +G       E   +  +       L+ Q +++    +   +L+S     
Sbjct: 8   AIGKARNGVQTVGSFFLTFWEILKALPRRPFQWRELVAQAWFIASVSIVPTMLMSIPFCV 67

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           ++  Q    L++ GA   S     I  +REIG ++T +++AG   +AI A++GS  I EE
Sbjct: 68  MVVFQINVLLNEIGAIDLSGAGAGIAVIREIGPIVTVLVVAGAGATAICADLGSRTIREE 127

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+R +G+D ++ L  PR+ A  +    L  L     + G  +            + + 
Sbjct: 128 IDAMRVLGIDPIQRLAVPRVIASCVVAVFLNGLVTAIGLTGGYLYGVFLQGATPGQYITA 187

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                  +++    +KA        +VA   GF  G     +G  V   VV S  ++ + 
Sbjct: 188 IPILTGTSDLLISELKAGIFGLLAAVVACHLGFKAGGGPKGVGDAVNQTVVLSFVLLFLA 247

Query: 361 DSLFAIF 367
           +++    
Sbjct: 248 NAVITTL 254


>gi|224025978|ref|ZP_03644344.1| hypothetical protein BACCOPRO_02729 [Bacteroides coprophilus DSM
           18228]
 gi|224019214|gb|EEF77212.1| hypothetical protein BACCOPRO_02729 [Bacteroides coprophilus DSM
           18228]
          Length = 247

 Score =  189 bits (480), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 66/243 (27%), Positives = 111/243 (45%), Gaps = 1/243 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG  +   G   A   + + +    I +M  +G++ + +V+LISF  GAVI  Q   
Sbjct: 5   ISTLGKYLMLMGRVFARPERIRMYFKQYINEMVQLGINSIGIVLLISFFIGAVICIQIKL 64

Query: 189 QLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +       F +   +  + L E    +  +++AG+ GS I +EIG+M++ ++IDA+  M
Sbjct: 65  NIESPWMPRFVVGYTTREILLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALEIM 124

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    LI P+I  L+  +PLL I + F+ IIGA    W    +               
Sbjct: 125 GINSASYLILPKILGLMTIIPLLVIFSIFAGIIGAFCTAWFAGIMNATDLEYGLQYCFIE 184

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             I+   IK+ F A  I  V+   G+ V   S ++GK  T  VV S  +++  D +    
Sbjct: 185 WYIWCSFIKSLFFAFIIASVSAYFGYTVEGGSIAVGKASTDSVVSSSVLILFSDLILTQL 244

Query: 368 YFA 370
              
Sbjct: 245 LMG 247


>gi|78223740|ref|YP_385487.1| hypothetical protein Gmet_2543 [Geobacter metallireducens GS-15]
 gi|78194995|gb|ABB32762.1| protein of unknown function DUF140 [Geobacter metallireducens
           GS-15]
          Length = 253

 Score =  188 bits (479), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 57/241 (23%), Positives = 116/241 (48%), Gaps = 1/241 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               L      +       ++   +    I Q+  +GV  + +V L    TG V+A Q  
Sbjct: 10  FLQELQAFFVLSARAVVRIFRRPWYYREFITQLDKMGVGSLFIVCLTGLFTGMVMALQAL 69

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  F A  +   ++++  ++E+G +L+++M+AGR GS+I AE+G+M + E++DA+R  
Sbjct: 70  IQLKPFAATSYVGGMVAVTMVKELGPVLSSLMVAGRVGSSITAELGTMVVTEQVDAMRVE 129

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G D +  L++ R+ A+++++PLL ++ +  A++G  ++    YDI   +++         
Sbjct: 130 GTDIITRLVTSRLKAMLVAMPLLAVVTDALALLGGYVIASG-YDINLLMYWKSLSQFMVF 188

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            ++  G+ K       I ++    G      +  +G      VV S  +V++ D      
Sbjct: 189 QDLVEGVAKPFVFGFLIAMIGSYAGLTTSGGAEGVGAAAKRAVVVSSIMVLVCDFFMTKI 248

Query: 368 Y 368
           +
Sbjct: 249 F 249


>gi|56417212|ref|YP_154286.1| hypothetical protein AM1212 [Anaplasma marginale str. St. Maries]
 gi|222475576|ref|YP_002563993.1| hypothetical protein AMF_912 [Anaplasma marginale str. Florida]
 gi|254995379|ref|ZP_05277569.1| hypothetical protein AmarM_05554 [Anaplasma marginale str.
           Mississippi]
 gi|255003566|ref|ZP_05278530.1| hypothetical protein AmarPR_05019 [Anaplasma marginale str. Puerto
           Rico]
 gi|255004692|ref|ZP_05279493.1| hypothetical protein AmarV_05379 [Anaplasma marginale str.
           Virginia]
 gi|56388444|gb|AAV87031.1| hypothetical protein AM1212 [Anaplasma marginale str. St. Maries]
 gi|222419714|gb|ACM49737.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
          Length = 259

 Score =  188 bits (479), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 58/249 (23%), Positives = 112/249 (44%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                       +G +     +  A       +     RQ + +    +P+V + +  TG
Sbjct: 10  AVGRYFIGLVVPVGRMSIFCAKSVALGALPPYYFPIAARQFFEMWFFSLPIVGMTALFTG 69

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
             +  Q         A  F   ++++  +RE+G +L  +++AGR G+A+ AEIG+M+I E
Sbjct: 70  GALVLQDTLVGGGKVAAHFMAGIVTVAIVRELGPVLIGLIVAGRVGAAVAAEIGTMRITE 129

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +IDA+ T+  D  + L++PR+ AL++++P+L I  +F  I G   V           +  
Sbjct: 130 QIDALDTLEADPFQYLVAPRVIALMVAMPVLIIYTDFLGIFGGYAVGTLGLGYNPNEYIG 189

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                    ++  GL+KA      I +V    G+     +  +G   T  VV S  ++++
Sbjct: 190 GVAEFLRFKDVTEGLVKAVSFGFVIAMVGCYSGYYCSGGARGVGAATTNTVVSSSMLIVL 249

Query: 360 IDSLFAIFY 368
           ++ +  +FY
Sbjct: 250 LNYVITVFY 258


>gi|284034023|ref|YP_003383954.1| hypothetical protein Kfla_6152 [Kribbella flavida DSM 17836]
 gi|283813316|gb|ADB35155.1| protein of unknown function DUF140 [Kribbella flavida DSM 17836]
          Length = 275

 Score =  188 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 56/255 (21%), Positives = 110/255 (43%), Gaps = 6/255 (2%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVV 171
           + K +N        L   +        S  +++  +L L+ ++        V    V V+
Sbjct: 8   VKKPLNSLDRLGEQLAFYLKALAWSGRSVTRYRKEILRLLAEVTLGTGALAVIGGTVGVI 67

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
             ++F TG  +  QG   L+Q G   F+  + + +  REIG L+  + +A   G    A+
Sbjct: 68  TFLAFFTGTEVGLQGYSALNQIGTSAFAGFVSAYINTREIGPLIAGIALAATVGCGFTAQ 127

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           +G+M+I+EEIDA+  M +  +  L++ RI A +I++  L ++   S+     + +  +Y 
Sbjct: 128 LGAMRISEEIDALEVMAIPSLPFLVTTRIIAGLIAVVPLYVVGLLSSYFATRLTVTTFYG 187

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
                +   FH      ++     K    A  + +V    G+        +G  V   V 
Sbjct: 188 QSTGTYDHYFHLFLPPGDVLWSFGKVLVFAVLVILVHCYHGYHASGGPAGVGVAVGRAVR 247

Query: 352 QSISIVIIIDSLFAI 366
            SI ++ ++D L ++
Sbjct: 248 TSIVVINVVDLLLSM 262


>gi|302551012|ref|ZP_07303354.1| ABC transporter integral membrane protein [Streptomyces
           viridochromogenes DSM 40736]
 gi|302468630|gb|EFL31723.1| ABC transporter integral membrane protein [Streptomyces
           viridochromogenes DSM 40736]
          Length = 271

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 57/254 (22%), Positives = 109/254 (42%), Gaps = 9/254 (3%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVI 172
           +K +    +Q    G  ++ TG       ++K  +L L+ ++ +      V    V V+ 
Sbjct: 8   LKALEALGTQLSFYGRSLAWTGRTLR---RYKKEVLRLLAEVSFGRGALAVVGGTVGVIA 64

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
            +SF TG  +  QG   L+Q G   F   L +    REI  L+  + ++   G+   A++
Sbjct: 65  FLSFFTGTEVGLQGYAALNQLGTSNFVAFLSAYFNTREIAPLVAGLALSATVGAGFTAQL 124

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           G+M+I+EE DA+  MG+  +  L++ R+ A  +++  L ++   S+ + A  +   YY  
Sbjct: 125 GAMRISEETDALEVMGVPSLPFLVTTRMIAGFVAVIPLYVIGLLSSYLAARTITTGYYGQ 184

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
               +   F       ++     K    A  I +V    G+        +G  V   V  
Sbjct: 185 STGTYDHYFQQYLPPVDVLWSFGKVLVFAVLIILVHCFYGYHASGGPAGVGVAVGRAVRT 244

Query: 353 SISIVIIIDSLFAI 366
           SI  + ++D   ++
Sbjct: 245 SIVAINVLDLFLSL 258


>gi|53715368|ref|YP_101360.1| hypothetical protein BF4084 [Bacteroides fragilis YCH46]
 gi|253567257|ref|ZP_04844707.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|265767855|ref|ZP_06095387.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|52218233|dbj|BAD50826.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
 gi|251944088|gb|EES84607.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|263252527|gb|EEZ24055.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 247

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 62/247 (25%), Positives = 115/247 (46%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G  I   G   +   + + F    I+++  +GV+ + +V+LISF  GAVI  
Sbjct: 1   MIKALRTVGRYIMLMGRTFSRPERMRMFFRQYIKEIEQLGVNSIGIVLLISFFIGAVITI 60

Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +++  ++  + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 61  QIKLNIESPWMPRWTVGYVTREILLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I A++  +P+L   + F+ IIGA    W    +           
Sbjct: 121 LEIMGVNSANYLILPKITAMVTMIPILVTFSIFAGIIGAFATCWFGGIMTATDLEYGLQY 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                 ++ G+IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D +
Sbjct: 181 MFVEWFVWCGIIKSLFFAFIIASVSSFFGYTVEGGSIEVGKASTDSVVSSSVLILFADLV 240

Query: 364 FAIFYFA 370
                  
Sbjct: 241 LTKLLMG 247


>gi|194337270|ref|YP_002019064.1| protein of unknown function DUF140 [Pelodictyon phaeoclathratiforme
           BU-1]
 gi|194309747|gb|ACF44447.1| protein of unknown function DUF140 [Pelodictyon phaeoclathratiforme
           BU-1]
          Length = 264

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 62/247 (25%), Positives = 120/247 (48%), Gaps = 4/247 (1%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K +++  +   +           +     +  K K +    + Q    G   +P+V++ +
Sbjct: 12  KLVLRLKDFFLTMQDFF----LFSLRAFMAMPKIKRYWRDFLDQAGICGTDSIPIVLVSA 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              GA++A +    L  FGA+       ++  +RE+G LL  +M++ R GS   AE+G+M
Sbjct: 68  ISIGALLAIEVGNLLEDFGAKTMLGRSTALSVIRELGPLLMGLMLSARFGSRNGAELGAM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           +I+E+IDA+R  G D +  L+ PR+ A +I    LT L++F+ +  A+ +   Y+ I   
Sbjct: 128 QISEQIDALRAFGTDPIAKLVMPRLVAALIMFLPLTALSDFAGLQSAAYMAEHYHRIDPG 187

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           +F++  +      +   G +KAP  A  I +V+   GF+    +  +G+     +V S  
Sbjct: 188 IFWNAVYPRLAPKDFVVGFLKAPVFAIIITLVSSFNGFSARGGTAGVGRATIKGIVVSSG 247

Query: 356 IVIIIDS 362
           +V+I + 
Sbjct: 248 LVLIANF 254


>gi|325003316|ref|ZP_08124428.1| putative ABC-transporter integral membrane protein [Pseudonocardia
           sp. P1]
          Length = 259

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 61/240 (25%), Positives = 105/240 (43%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G  I    E    S +    L  LI Q ++V         L +   GA IA        
Sbjct: 14  VGKFIGLGAEIGKQSLRRPFQLRELIEQTWFVTKVSALPTALFTIPFGATIALLLGELTR 73

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           QFGA+  +     +  +++   ++TA++I+G  GSA+ A++G+  I EEI A+  +G+  
Sbjct: 74  QFGAQSQTGAGAVLAIVQQAAPIVTALLISGAGGSAVCADLGARTIREEIAAMEVLGISP 133

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           ++ L+ PR+ A+ I+  +L  LA    + G               + S F + A +++I 
Sbjct: 134 IQRLVVPRVLAMGITAVVLNGLATCVGVSGGYFFNVIIQGGSPGAYISSFSAIAQVSDIV 193

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
              IKA       G+VA   G      +  +G  V   VV S  +V +I+ +    Y  +
Sbjct: 194 VSEIKAFLFGIVAGVVAAYRGLNPPPGAKGVGDAVNQAVVISFVLVFLINLVLTALYLEL 253


>gi|83816537|ref|YP_446599.1| hypothetical protein SRU_2501 [Salinibacter ruber DSM 13855]
 gi|294508531|ref|YP_003572590.1| Conserved hypothetical protein, membrane, containing DUF140 domain
           [Salinibacter ruber M8]
 gi|83757931|gb|ABC46044.1| domain of unknown function superfamily [Salinibacter ruber DSM
           13855]
 gi|294344860|emb|CBH25638.1| Conserved hypothetical protein, membrane, containing DUF140 domain
           [Salinibacter ruber M8]
          Length = 250

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 65/238 (27%), Positives = 113/238 (47%), Gaps = 1/238 (0%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
            ++   S    LG   +  G   AS  K   +  +L  QM  VG+  +P+V L +  TGA
Sbjct: 1   MLDALLSPFRALGRYATLMGRAFASIDKVGTYWNNLFIQMVRVGIDSIPIVALAAAFTGA 60

Query: 181 VIAQQGAFQL-SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           V   Q A+QL + F  +     +++   + E+G ++   ++AGR G+ I AE+G+M+++E
Sbjct: 61  VFTVQTAYQLETPFIPKTIIGSIVAPSIMLELGAVIAGFILAGRVGARIAAELGTMRVSE 120

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +IDA+  MGL+ V  L+ PR+ A ++  P+L +++    I     V      +  + F  
Sbjct: 121 QIDALEVMGLNSVGFLVLPRVLAGVLMFPVLYVVSCVVGIGTGIGVGHFGGFLSASEFLE 180

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                  L +   GLIK+      I  +A  +G+  G  +  +G   T   V S   +
Sbjct: 181 GARQFFKLLDPTIGLIKSFAFGFIITSIACYKGYYTGGGAVGVGDSTTQAAVLSCVFI 238


>gi|269958397|ref|YP_003328184.1| putative ABC transporter [Anaplasma centrale str. Israel]
 gi|269848226|gb|ACZ48870.1| putative ABC transporter [Anaplasma centrale str. Israel]
          Length = 259

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 117/264 (44%), Gaps = 7/264 (2%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
           N+   +   IG+  +  I      +        +        Y F        RQ + + 
Sbjct: 2   NAIVAIFAAIGRYFIGLIIPVGRMSVFCAQ---SVMRGILPPYYFPIA----ARQFFEMW 54

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
              +P+V + +  TG  +  Q         A  F   ++++  +RE+G +L  +++AGR 
Sbjct: 55  FFSLPIVGMTALFTGGALVLQDTLVGGGKVAAHFMAGIVTVATVRELGPVLIGLIVAGRV 114

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           G+A+ AEIG+M+I E+IDA+ T+  +  + L+ PR+ AL+I++P+L +  +F  I G   
Sbjct: 115 GAAVAAEIGTMRITEQIDALDTLEANPFQYLVMPRVIALMIAMPVLIVYTDFLGIFGGYA 174

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
           V           +           ++  GL+KA      I +V    G+     +  +G 
Sbjct: 175 VGTLGLGYDSNEYLGGVAEFLHFKDVAEGLVKAVSFGFVISLVGCYSGYYCSGGARGVGV 234

Query: 345 KVTTCVVQSISIVIIIDSLFAIFY 368
             T  VV S  ++++++ +  +FY
Sbjct: 235 ATTNTVVASSMLIVLLNYVITVFY 258


>gi|225677253|ref|ZP_03788238.1| hypothetical protein WUni_007540 [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225590703|gb|EEH11945.1| hypothetical protein WUni_007540 [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 187

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 93/185 (50%)

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           + Q +        E     L++I  ++E+G +L ++++ G+ GS++ AEIG+M+I E+ID
Sbjct: 1   SLQSSLSDPLINQEQIIPKLVTITIIKELGPVLISLIMVGKVGSSVAAEIGTMRITEQID 60

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
            + T+ ++  + LI+PRI A II  P+LT+ A+   I G  I     ++    ++     
Sbjct: 61  VLTTLNINPFKYLIAPRILASIIVFPILTVCADLIGIFGGCITAVFEFNHNLNIYIKHTA 120

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
                 +  TGLIKA      I + +   G+     +  +G   T+ VV S  ++I+ + 
Sbjct: 121 QFFNTYDFITGLIKATVFGAIISVSSCYYGYHCKEGARGVGVATTSTVVLSSILIILANY 180

Query: 363 LFAIF 367
           +  + 
Sbjct: 181 MITLI 185


>gi|302523958|ref|ZP_07276300.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4]
 gi|302432853|gb|EFL04669.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4]
          Length = 262

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 56/245 (22%), Positives = 109/245 (44%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
                 G + +   +     ++        I+Q ++V    +    L++   GAVI+ Q 
Sbjct: 12  GMLRETGNLFALGLDIVRGIFQRPFQFREFIQQAWFVASVTILPTALVAIPFGAVISLQF 71

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
                Q GA+ ++     +  +++   L+TA+++AG  GSA+ A+IG+  I EEIDA+  
Sbjct: 72  GALARQLGAQSYTGAGSVLATVQQASPLVTALLVAGAGGSAVCADIGARTIREEIDAMEV 131

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +G+  V+ LI PR  A+++   LL  + +   ++G               + S F + A 
Sbjct: 132 LGVSAVQRLIVPRTLAMMLVALLLNGMVSVIGVLGGYFFNVVLQGGTPGAYLSSFSALAQ 191

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L +++ G IKA        +VA   G         +G  V   VV +  ++ +++ +  +
Sbjct: 192 LPDLWVGEIKALIFGFIAAVVAAYRGLHPSGGPKGVGDAVNQSVVITFLLLFVVNFVITL 251

Query: 367 FYFAI 371
            Y  +
Sbjct: 252 IYLQL 256


>gi|255011705|ref|ZP_05283831.1| hypothetical protein Bfra3_21365 [Bacteroides fragilis 3_1_12]
 gi|313149539|ref|ZP_07811732.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313138306|gb|EFR55666.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 247

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 115/247 (46%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G  +   G   +   + + F    I+++  +GV+ + +V+LISF  GAVI  
Sbjct: 1   MIKALRTVGRYMMLMGRTFSRPERMRMFFRQYIKEIEQLGVNSIGIVLLISFFIGAVITI 60

Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +++  ++  + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 61  QIKLNIESPWMPRWTVGYVTREILLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I A++  +P+L   + F+ IIGA    W    +           
Sbjct: 121 LEIMGVNSANYLILPKITAMVTMIPILVTFSIFAGIIGAFATCWFGGIMTATDLEYGLQY 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                 ++ G+IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D +
Sbjct: 181 MFVEWFVWCGIIKSLFFAFIIASVSSFFGYTVEGGSIEVGKASTDSVVSSSVLILFADLV 240

Query: 364 FAIFYFA 370
                  
Sbjct: 241 LTKLLMG 247


>gi|110680422|ref|YP_683429.1| hypothetical protein RD1_3241 [Roseobacter denitrificans OCh 114]
 gi|109456538|gb|ABG32743.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
          Length = 257

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 55/247 (22%), Positives = 107/247 (43%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             S    +G +    G+      +   +      Q+  +G   +PVV L +  TG  +A 
Sbjct: 11  VLSALAAIGRIAIFGGQTIGHLARPPFYAREFATQLLNIGWLSLPVVGLTAVFTGGALAL 70

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q     S+F AE     ++++  +RE+G +L  +MIA R  S+I AEI +MK+ E+IDA+
Sbjct: 71  QIYAGGSRFNAEAVVPQIVAVGMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQIDAL 130

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            T+    ++ L  PR+ A ++ +PLL  + +   I G   V         A + +   + 
Sbjct: 131 VTLSTHPMKYLTVPRVLAAVLVVPLLVAVGDIIGIFGGFAVATGTLGFNAATYINNTVNF 190

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               ++ + L K         ++    G   G  +  +G+     V  +  +++  + + 
Sbjct: 191 LEPLDVISSLTKGAVFGFCAALMGCYHGMNSGRGAMGVGRATKGAVEGAAVLILAANFVL 250

Query: 365 AIFYFAI 371
              +F +
Sbjct: 251 TGVFFTL 257


>gi|299137710|ref|ZP_07030891.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX8]
 gi|298600351|gb|EFI56508.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX8]
          Length = 256

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 57/237 (24%), Positives = 107/237 (45%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +G +   +      S +         RQ+   G   + ++++  F  GAV+     
Sbjct: 7   LFEFVGKLGLFSLRVVGDSLRPPFEFAQFFRQVAEAGNKSLILIVVSGFALGAVMTLHTR 66

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L  FGA      + ++    EIG L+  +++AGR GS I A + +M+  E+IDAI ++
Sbjct: 67  STLVMFGATAMIPAVQAVAFFVEIGPLVAGLLLAGRVGSGIGAVLANMRATEQIDAIESL 126

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
            +D  + L+ PR+ A ++ LP+LT+  +F+ ++G  +       I   ++ +R       
Sbjct: 127 SIDSFKFLVVPRVLACVVVLPILTLFMDFAGLLGGFLSEGLTSHIGPTLYVNRAFDYIQW 186

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           +N     +K       IG V+   G+     +  +G+  T  VV S  ++I+ D L 
Sbjct: 187 SNFIAPTLKTTVFGFIIGSVSSYFGYTTDKGAKGVGEAATNSVVLSSLLIIVADVLL 243


>gi|206602089|gb|EDZ38571.1| Probable ABC transporter, permease [Leptospirillum sp. Group II
           '5-way CG']
          Length = 251

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 56/248 (22%), Positives = 118/248 (47%), Gaps = 4/248 (1%)

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
           D         L++S +  +  + ++        + QM  +GV  +P+V L S   G  +A
Sbjct: 3   DLFQSMGDFALMVSKSFRYMVTHFR----TGDTLIQMDRIGVGSIPIVFLASIFAGLDMA 58

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
            Q    ++ +GA      +++   +R++G +L +++++ R  + I +E+G M   ++IDA
Sbjct: 59  LQFEVVMAPYGARALLGKVVTTSIIRDMGPVLASLVMSARVTAGISSELGMMNSTQQIDA 118

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R MG+D +  L++PRI+A I+ +P+L+I  +F A++    +      +P  +F+S    
Sbjct: 119 LRVMGVDPLDRLVAPRIFAGIVMMPILSISGDFLALLAGLGISMAVGHVPAPLFWSGVRD 178

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             T  N+    +K  F    +  +    G      +  +GK  T  VV +   +++ + L
Sbjct: 179 ALTAQNLTDAFLKPLFFGFILTSIGCYYGMKSASGAFGVGKSTTKAVVSAAIWILVANFL 238

Query: 364 FAIFYFAI 371
            +     +
Sbjct: 239 LSKLLINV 246


>gi|78186330|ref|YP_374373.1| putative ABC transport system permease protein [Chlorobium luteolum
           DSM 273]
 gi|78166232|gb|ABB23330.1| putative ABC transport system permease protein [Chlorobium luteolum
           DSM 273]
          Length = 256

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 63/238 (26%), Positives = 117/238 (49%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +      +    A+  K + +    + Q    G   +P+V++ +   G+++A 
Sbjct: 9   IKGFFLTMQDFFFFSVRAFATMPKIRRYWRDFLDQAAICGADSIPIVLVSAISIGSLLAI 68

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           +    L  FGA+       SI  +RE+G LL  +M++ R GS   AE+G+M+I+E+IDA+
Sbjct: 69  EVGNLLEDFGAKTMLGRSTSISVIRELGPLLMGLMLSARFGSRNGAELGAMQISEQIDAL 128

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R  G D V  L+ PR+ A +I    LT L++F+ +  A+ +   Y+ +   +F++  +  
Sbjct: 129 RAFGTDPVAKLVMPRLLAALIMFLPLTALSDFAGLYSAAYMAEHYHHLDPGIFWNSVYPR 188

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
             L +   G  KAP  A  I +V+   GF+    ++ +G+     +V S  +V+I + 
Sbjct: 189 LALKDFVVGFAKAPVFAVIITLVSSFNGFSASGGTSGVGRSTIKGIVVSSGLVLIANF 246


>gi|254495378|ref|ZP_05108302.1| ABC transporter, permease protein [Polaribacter sp. MED152]
 gi|85819732|gb|EAQ40889.1| ABC transporter, permease protein [Polaribacter sp. MED152]
          Length = 234

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 53/230 (23%), Positives = 97/230 (42%), Gaps = 1/230 (0%)

Query: 141 EFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ-FGAEIFS 199
           +      K + F  +L++++  +G+  + +++ ISF  G VIA Q A  L   F      
Sbjct: 4   QVFKRPQKARVFYDALLKEIEELGLKSLGIILFISFFIGGVIALQTALNLDSAFIPRSLI 63

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
                   + E      ++++AG+ GS I + IG+M++ E+IDA+  MG++ +  L+ P+
Sbjct: 64  GFAAKRSIILEFAPTFCSIILAGKVGSYITSSIGTMRVTEQIDALEVMGINSLNHLVLPK 123

Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319
           + A +   P L  L     + G  +            +     +      I   LIK   
Sbjct: 124 VIATVFFYPFLITLGMVLGMFGGWLAGVLSGLFSGVNYIEGLQTDFQPFLIVYALIKTLV 183

Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
            A  I  V    G+ V   S ++GK  T  VV +  +++I +        
Sbjct: 184 FAFLIATVPSYHGYYVKGGSIAVGKASTQSVVWTTILIVIANYFLTQMLL 233


>gi|313206130|ref|YP_004045307.1| hypothetical protein Riean_0637 [Riemerella anatipestifer DSM
           15868]
 gi|312445446|gb|ADQ81801.1| protein of unknown function DUF140 [Riemerella anatipestifer DSM
           15868]
          Length = 253

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 58/249 (23%), Positives = 106/249 (42%), Gaps = 3/249 (1%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           S      +G  +   G+      K   F   L+R++  +GV+   +V+  S   GAV+A 
Sbjct: 5   SKRMLTSVGEYVLLLGKVIKRPQKHNIFFKLLMREINDLGVNSFGLVLFTSIFVGAVVAI 64

Query: 185 QGAFQLSQFGAEI---FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           Q           I   F      ++ + E    + ++++AG+ GS I + IG+M++ E+I
Sbjct: 65  QMYNNFKASTIPIPLYFIGYATKVVLILEFSPTIISLILAGKVGSYIASSIGTMRVTEQI 124

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  MG++    LI P+I A +I  PLL  ++    I G  +      +   A + +  
Sbjct: 125 DALDIMGVNSPNFLILPKIVANVIFNPLLIAISIVFGIYGGYLAGVATGNWTEADYITGI 184

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                   I+    K    A  I  +    G+ V   S  +G+  T  VV ++  +II +
Sbjct: 185 QRYIPDYFIWYAFFKTVVFAFLIATIPAYFGYNVKGGSLEVGRASTQAVVWTMVAIIIAE 244

Query: 362 SLFAIFYFA 370
            +    + +
Sbjct: 245 LVSTQLFLS 253


>gi|282900961|ref|ZP_06308894.1| protein of unknown function DUF140 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281194052|gb|EFA69016.1| protein of unknown function DUF140 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 259

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 104/228 (45%)

Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198
            G+      + K +   ++     VG   +  V+L+S   G +   Q A +L +FGA   
Sbjct: 25  FGQISLHIIQGKTYYRKILDHALKVGPGSLSPVLLVSGFAGMIFTIQTARELIRFGAVDN 84

Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258
                ++   RE+  +LTA +IAG+ GSA  AEIG+M++ E+IDA+  +  D +  L+ P
Sbjct: 85  LGGAFAVAFCRELAPILTASVIAGQVGSAFAAEIGAMQVTEQIDALYLLKTDPIDYLVLP 144

Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318
           R+ A  + +P++ I A    + G      ++Y +    F        T  ++   ++K  
Sbjct: 145 RVIACGLMMPVMMIFALIMGVSGGIFAGLQFYQVQPENFLESVRDFLTPGDMMMIIVKGV 204

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
                + +     G      +  +G+  TT VV +  ++ I D L A+
Sbjct: 205 IFGIIVAVNGCSWGLTTRGGAKEVGESATTAVVTTWVVLFITDFLLAL 252


>gi|118581609|ref|YP_902859.1| hypothetical protein Ppro_3208 [Pelobacter propionicus DSM 2379]
 gi|118504319|gb|ABL00802.1| protein of unknown function DUF140 [Pelobacter propionicus DSM
           2379]
          Length = 256

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 60/244 (24%), Positives = 117/244 (47%), Gaps = 1/244 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                H L    S  G   A  ++   +    + Q   +G + + + +L    +G V+A 
Sbjct: 10  LIRFFHGLQSYFSLGGGMLARIFRRPSYYREFVVQFDKLGFASLFICLLTGLFSGMVMAL 69

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q   QL  F A  +   +++   ++E+G +L ++M+AGR GSAI AE+G+M + E++DA+
Sbjct: 70  QALIQLKPFAATSYVGGMVAATMIKELGPVLASLMVAGRGGSAITAELGTMVVTEQVDAM 129

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R  G D ++ L +PR+ A+++++PLLT+  +  +++G  ++    Y I   ++ S     
Sbjct: 130 RVEGTDIIQRLATPRLKAMLLAMPLLTVATDVISLVGGYVMSAG-YGINPIMYVSGLSQF 188

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               ++  GL+K  F    I +     G      +  +G      VV S   +++ D   
Sbjct: 189 MVFQDLIEGLVKPLFFGLIIAVTGCYVGLNTRGGAEGVGAAAKQAVVLSSVTILVSDFFI 248

Query: 365 AIFY 368
           +  +
Sbjct: 249 SKIF 252


>gi|315022937|gb|EFT35960.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Riemerella anatipestifer
           RA-YM]
 gi|325336426|gb|ADZ12700.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Riemerella anatipestifer
           RA-GD]
          Length = 253

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 58/249 (23%), Positives = 106/249 (42%), Gaps = 3/249 (1%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           S      +G  +   G+      K   F   L+R++  +GV+   +V+  S   GAV+A 
Sbjct: 5   SKRMLTSVGEYVLLLGKVIKRPQKHNIFFKLLMREINDLGVNSFGLVLFTSIFVGAVVAI 64

Query: 185 QGAFQLSQFGAEI---FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           Q           I   F      ++ + E    + ++++AG+ GS I + IG+M++ E+I
Sbjct: 65  QMYNNFKASTIPIPLYFIGYATKVVLILEFSPTIISLILAGKVGSYIASSIGTMRVTEQI 124

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  MG++    LI P+I A +I  PLL  ++    I G  +      +   A + +  
Sbjct: 125 DALDIMGVNSPNFLILPKIVANVIFNPLLIAISIVFGIYGGYLAGVATGNWTEADYITGI 184

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                   I+    K    A  I  +    G+ V   S  +G+  T  VV ++  +II +
Sbjct: 185 QRYIPDYFIWYAFFKTVVFAFLIATIPAYFGYNVKGGSLEVGRASTQAVVWTMVAIIIAE 244

Query: 362 SLFAIFYFA 370
            +    + +
Sbjct: 245 LISTQLFLS 253


>gi|124515845|gb|EAY57354.1| probable ABC transporter, permease [Leptospirillum rubarum]
          Length = 251

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 56/248 (22%), Positives = 118/248 (47%), Gaps = 4/248 (1%)

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
           D         L++S +  +  + ++        + QM  +GV  +P+V L S   G  +A
Sbjct: 3   DLFQSMGDFTLMVSKSFRYMVTHFR----TGDTLIQMDRIGVGSIPIVFLASIFAGLDMA 58

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
            Q    ++ +GA      +++   +R++G +L +++++ R  + I +E+G M   ++IDA
Sbjct: 59  LQFEVVMAPYGARALLGKVVTTSIIRDMGPVLASLVMSARVTAGISSELGMMNSTQQIDA 118

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R MG+D +  L++PRI+A I+ +P+L+I  +F A++    +      +P  +F+S    
Sbjct: 119 LRVMGVDPLDRLVAPRIFAGIVMMPILSISGDFLALLAGLGISMAVGHVPAPLFWSGVRD 178

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             T  N+    +K  F    +  +    G      +  +GK  T  VV +   +++ + L
Sbjct: 179 ALTAQNLTDAFLKPLFFGFILTSIGCYYGMKSASGAFGVGKSTTKAVVSAAIWILVANFL 238

Query: 364 FAIFYFAI 371
            +     +
Sbjct: 239 LSKLLINV 246


>gi|83594240|ref|YP_427992.1| hypothetical protein Rru_A2908 [Rhodospirillum rubrum ATCC 11170]
 gi|83577154|gb|ABC23705.1| Protein of unknown function DUF140 [Rhodospirillum rubrum ATCC
           11170]
          Length = 275

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 77/276 (27%), Positives = 143/276 (51%), Gaps = 6/276 (2%)

Query: 95  NQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVIS--NTGEFCASSYKFKGF 152
           +    +     +       +G+ ++  + +    + +    +     G F     +    
Sbjct: 2   DSPKTKPGLSQALLKAVERLGQGVIAGVAEIGQASLLGAESLYWLVVGRFRGQPVR---- 57

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           L +++ Q   +G+  +P+V++++F  G ++A QG + L  FGAE   +  ++   +RE  
Sbjct: 58  LGAIVEQAMEMGIRALPIVLVMNFTIGMMLAIQGIYSLRMFGAEQQVVLGVAFSVVREFA 117

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            L+T +++AGRSGSAI A +G+M IN+EIDA+  MG+  VR L++P + A ++ +PL+T 
Sbjct: 118 PLITGILVAGRSGSAIAARLGTMTINQEIDALTVMGIVPVRYLVAPPLIAALVMVPLMTF 177

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           L    A++GAS+ +     +  + FF +      L ++  GL K+   A  I +V +  G
Sbjct: 178 LGMLVALLGASLTVRIDLGMSLSAFFHQTLDILRLIDLTHGLGKSALFALQIVLVGVVNG 237

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
            +V   +  +GK  T  VVQ+IS +I+ D +FA   
Sbjct: 238 VSVSGGAEGVGKMTTRSVVQAISAIIVTDMVFAFIL 273


>gi|269124784|ref|YP_003298154.1| hypothetical protein Tcur_0519 [Thermomonospora curvata DSM 43183]
 gi|268309742|gb|ACY96116.1| protein of unknown function DUF140 [Thermomonospora curvata DSM
           43183]
          Length = 288

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 55/205 (26%), Positives = 101/205 (49%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V+  +SF  G  I  QG   L   GAE F   + S   +REI  ++ AV +A + GSA
Sbjct: 77  VFVIFTMSFFVGTEIGLQGYTGLRSIGAESFMGLVGSFANVREITPVIAAVALAAQCGSA 136

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
             AE+G+M+I+EEIDA+  MG+     L+  R+ A +I+L  L ++A F++     ++  
Sbjct: 137 FTAELGAMRISEEIDALEVMGISSFTYLVCTRVLAALIALVPLYLIALFASFFSTRLITT 196

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +++ +   V+   F     + ++    IK    A A+  +    G+        +G+   
Sbjct: 197 QFFGLAPGVYDYYFQLYLPMIDLVYSSIKVAVFAFAVIAIHCYYGYYATGGPAGVGRATG 256

Query: 348 TCVVQSISIVIIIDSLFAIFYFAIG 372
             +  SI +++ ++ L +  ++  G
Sbjct: 257 RAIRLSIIVIVTLNLLLSYLFWGNG 281


>gi|269128542|ref|YP_003301912.1| hypothetical protein Tcur_4347 [Thermomonospora curvata DSM 43183]
 gi|268313500|gb|ACY99874.1| protein of unknown function DUF140 [Thermomonospora curvata DSM
           43183]
          Length = 282

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 112/260 (43%), Gaps = 10/260 (3%)

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVS------- 166
           G+ + + I    ++    G  +S      A + +  + +   + R +  V +        
Sbjct: 8   GRALARVIGKPLNRVEDFGHQLSFYARAFAWTLRVLRRYRTEVARLLAEVSLGTGGLAVI 67

Query: 167 --GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
              V +V  ++F TG+ +  QG   L+Q G   ++  + S    RE+  L++A+ ++   
Sbjct: 68  GGSVAIVGFMTFFTGSQVGLQGYNSLNQIGTAAYTGFVSSYFNTRELAPLVSALALSATV 127

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           G    A++G+M+I++EIDA+  M +  V  L++ R+ A +I++  L ++   ++ +   +
Sbjct: 128 GCGFTAQLGAMRISDEIDALEVMAVPTVPFLVTTRLLAGMIAVIPLYVVGLLASYLATRL 187

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
           ++  +Y      +   F+      +I     K    A  + ++    GF        +G 
Sbjct: 188 IVTVFYGQSTGTYDHYFNLFLPPYDILWSFGKVIVFAILVMLIHCYYGFHASGGPAGVGV 247

Query: 345 KVTTCVVQSISIVIIIDSLF 364
            V   V  SI ++ + D   
Sbjct: 248 AVGRAVRTSIVVINLADLFL 267


>gi|282897686|ref|ZP_06305685.1| Protein of unknown function DUF140 [Raphidiopsis brookii D9]
 gi|281197365|gb|EFA72262.1| Protein of unknown function DUF140 [Raphidiopsis brookii D9]
          Length = 241

 Score =  187 bits (475), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 62/235 (26%), Positives = 108/235 (45%)

Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198
            G+      + K +   ++     VG   +  V+L+S   G +   Q A +L +FGA   
Sbjct: 7   FGQISLHIIQGKTYYRKILDHALKVGPGSLSPVLLVSGFAGMIFTIQTARELVRFGAVDN 66

Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258
                ++   RE+  LLTA +IAG++GSA  AEIG+M++ E+IDA+  +  D +  L+ P
Sbjct: 67  LGGAFAVAFCRELAPLLTASVIAGQAGSAFAAEIGAMQVTEQIDALYLLKTDPIDYLVLP 126

Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318
           R+ A  + +P++ I A    + G      ++Y I    F        T  ++   +IK  
Sbjct: 127 RVIACGLMMPVMMIFALIIGVSGGIFAGLEFYQIQPENFLESVRDFLTPGDMMMIIIKGV 186

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
                + +     G      +  +G+  TT VV +  ++ I D L A+    +GI
Sbjct: 187 IFGIIVAVNGCSWGLTTRGGAKEVGESATTAVVTTWVVLFITDFLLALPGITVGI 241


>gi|227206406|dbj|BAH57258.1| AT1G19800 [Arabidopsis thaliana]
          Length = 201

 Score =  187 bits (475), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 46/191 (24%), Positives = 97/191 (50%)

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
                Q   + ++ G       ++++   RE+  ++T++++AGR GSA  AE+G+M+++E
Sbjct: 1   MAFTIQFVREFTRLGLNRSIGGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSE 60

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           + D +R +G D +  LI+PR+ A  ++LP LT++     +  ++++    Y I   +   
Sbjct: 61  QTDTLRVLGADPIDYLITPRVIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMD 120

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
             H      +I + +IK+      I +++   G      +  +G+  T+ VV S+  + I
Sbjct: 121 SAHRALRPWDIVSAMIKSQVFGAIISVISCSWGVTTTGGAKGVGESTTSAVVMSLVGIFI 180

Query: 360 IDSLFAIFYFA 370
            D + + F+F 
Sbjct: 181 ADFVLSSFFFQ 191


>gi|313158068|gb|EFR57473.1| conserved hypothetical protein [Alistipes sp. HGB5]
          Length = 247

 Score =  187 bits (475), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 61/246 (24%), Positives = 107/246 (43%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                 ++G      G+  +   K   +   ++ +M  +G+  + +  +IS   GAVI  
Sbjct: 1   MLKIFELIGRYFILMGKVFSRPEKAAIYRRRIVYEMESLGIDSIGLTAIISVFIGAVITL 60

Query: 185 QGAFQL-SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    L S F              + E    + A+++AG+ GS+I +EIG+M+I E+IDA
Sbjct: 61  QMCINLDSPFIPRSLVGYATRETMILEFSSTVVALILAGKVGSSIASEIGTMRITEQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I A ++  P LTIL+    IIG   + +    +  A +      
Sbjct: 121 LEIMGVNSASYLILPKIVAAVVFFPFLTILSIAIGIIGGWAIAYLTGIMIPADYIDGLLM 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +I   LIK    A  I  ++   G+    +S  +G   T  VV S  +++I + +
Sbjct: 181 DFKPYSIVYSLIKTAVFAYIITSISAFYGYYAKGNSLEVGAASTRAVVASSVVIMIFNLI 240

Query: 364 FAIFYF 369
                 
Sbjct: 241 LTQVLL 246


>gi|312131750|ref|YP_003999090.1| hypothetical protein Lbys_3075 [Leadbetterella byssophila DSM
           17132]
 gi|311908296|gb|ADQ18737.1| protein of unknown function DUF140 [Leadbetterella byssophila DSM
           17132]
          Length = 243

 Score =  187 bits (475), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 1/238 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
            G  +    E        K +    I +   +G+  + +V +++F  GAV   Q    L 
Sbjct: 5   FGKFLLFLYELFTRRESLKVYWKRFIDECMMIGIDSLLIVCIVAFFIGAVTCVQINANLV 64

Query: 192 QFGAEIFSI-DLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
                 + + +++  + L E+      V++AG+ GS I +E+G+M+I E+I+A+  MG++
Sbjct: 65  SPIIPTYIVSNIVRDMMLLELSSTFICVILAGKVGSNIASELGTMRITEQIEALEVMGIN 124

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
               L+ P++ A  +  P+L IL+ F  I+G  I       I    +      +    N+
Sbjct: 125 AASYLVLPKVLAAFVMFPILAILSGFIGIVGGYIAGTATGIITPEQYIYGIRFSFIPFNL 184

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
              +IK+      I  ++  +GF     +  +GK  TT V  S   ++I D L A   
Sbjct: 185 VIPIIKSAVFGVLIATISAYKGFYTRGGALEVGKVSTTAVTNSCIAILIADYLLAELL 242


>gi|119356498|ref|YP_911142.1| hypothetical protein Cpha266_0663 [Chlorobium phaeobacteroides DSM
           266]
 gi|119353847|gb|ABL64718.1| protein of unknown function DUF140 [Chlorobium phaeobacteroides DSM
           266]
          Length = 264

 Score =  187 bits (475), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 59/238 (24%), Positives = 115/238 (48%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +      +     +  K K +    + Q    G   +P+V++ +   G+++A 
Sbjct: 17  LKDFFLTMQEFFMFSVRAFLTIPKIKRYWRDFLDQATICGTDSIPIVLVSAISIGSLLAI 76

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           +    L  FGA+       SI  +RE+G LL  +M++ R G+   AE+G+M+I+E+IDA+
Sbjct: 77  EVGNLLEDFGAKTMLGRSTSISVIRELGPLLMGLMLSARFGARNGAELGAMQISEQIDAL 136

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R  G D V  L+ PR+ A ++    LT L++F+ +  A+ +   Y+ +   +F++  +  
Sbjct: 137 RAFGTDPVAKLVMPRLIAALVMFLPLTALSDFAGLHSAAYMAEHYHRLDPGMFWNAVYPR 196

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               +   G +KAP  A  I +V+   GF+    +  +G+     +V S  +V++ + 
Sbjct: 197 LAPKDFVVGFVKAPVFAIIITLVSSFNGFSARGGTAGVGRSTIKGIVVSSGLVLVANF 254


>gi|302525041|ref|ZP_07277383.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4]
 gi|302433936|gb|EFL05752.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4]
          Length = 257

 Score =  186 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 54/245 (22%), Positives = 109/245 (44%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +  H  G + +   +    +++       L++Q +++    +    L+S   GAVIA   
Sbjct: 7   AALHQTGRLYALGLDVVRLTFRRPFQFRELVQQFWFIASVSILPTALVSIPFGAVIALHI 66

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
               +Q GA+ F+     +  +++   ++TA++IAG  GSA+ A++GS  I EEIDA+  
Sbjct: 67  GSLTTQIGAQSFTGAASVLAIIQQASPIVTALLIAGAGGSAMCADLGSRTIREEIDAMEV 126

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +G+  ++ LI PR+ A +     L  + +   ++G               + + F + A 
Sbjct: 127 LGVSPIQRLIVPRVLAAMGVAVFLNGMVSVVGVLGGYFFNVIMQGGTPGAYLASFSALAQ 186

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L +++   IKA        +VA   G         +G  V   VV +  ++ +++ +   
Sbjct: 187 LPDLWISEIKALLFGFVAAVVASYRGLNPRGGPKGVGDAVNQSVVITFLLLFVLNLILTT 246

Query: 367 FYFAI 371
            Y  +
Sbjct: 247 VYLQL 251


>gi|300783703|ref|YP_003763994.1| ABC transporter permease [Amycolatopsis mediterranei U32]
 gi|299793217|gb|ADJ43592.1| ABC transport system permease protein [Amycolatopsis mediterranei
           U32]
          Length = 264

 Score =  186 bits (473), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 56/245 (22%), Positives = 108/245 (44%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +     G +     +    +++       LI+Q +++    +    L+S   GAVIA   
Sbjct: 14  AALRQTGRLYGLGLDVVRLTFRRPFQARELIQQFWFIASVSILPTALVSIPFGAVIALHI 73

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
               +Q GA+ F+     +  +++   ++TA++IAG  GSA+ A++GS  I EEIDA+  
Sbjct: 74  GSLTTQIGAQSFTGAASVLAIIQQASPIVTALLIAGAGGSAMCADLGSRTIREEIDAMEV 133

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +G+  V+ LI PR+ A +     L  + +   ++G               + + F + A 
Sbjct: 134 LGVSPVQRLIVPRVLAAMGVAVFLNGMVSVVGVLGGYFFNVIMQHGTPGAYLASFSALAQ 193

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L +++   IKA       G+VA   G         +G  V   VV +  ++ +++ +   
Sbjct: 194 LPDLWISEIKALIFGFVAGVVASYRGLNPKGGPKGVGDAVNQSVVITFLLLFVLNLILTT 253

Query: 367 FYFAI 371
            Y  +
Sbjct: 254 VYLQL 258


>gi|193213347|ref|YP_001999300.1| hypothetical protein Cpar_1708 [Chlorobaculum parvum NCIB 8327]
 gi|193086824|gb|ACF12100.1| protein of unknown function DUF140 [Chlorobaculum parvum NCIB 8327]
          Length = 265

 Score =  186 bits (473), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 63/252 (25%), Positives = 120/252 (47%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170
              IG  +   +         +           ++  K K +   ++ Q    GV  +P+
Sbjct: 3   LTLIGNFVDSKVLQLKELLLTMQEFFYFALRAFSTLPKAKRYWRDVLDQALICGVESIPI 62

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           V++ S   GA+++ +    L +FGA+       S   LRE+G LL  +M++ R GS   A
Sbjct: 63  VLVSSISIGALMSMEVGNLLEEFGAKTMLGRSTSNAVLRELGPLLMGLMLSARYGSRNGA 122

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           E+G+M+I+E+IDA+R  G D +  L+ PR+ A +I    L  L++F+ +  A++V   Y+
Sbjct: 123 ELGAMQISEQIDALRAFGTDPIAKLVMPRLLAALIMFVPLIALSDFAGLQTAALVAQFYH 182

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
            +   +F++  +      +     +KAP  A  I +V+   GF+    +  +G+     +
Sbjct: 183 KLDPGIFWNSIYPRLLPKDFVVSFLKAPVFAIIITLVSSFNGFSAHGGTAGVGRSTIKGI 242

Query: 351 VQSISIVIIIDS 362
           V S  +V++ + 
Sbjct: 243 VASSGLVLVANF 254


>gi|153809065|ref|ZP_01961733.1| hypothetical protein BACCAC_03373 [Bacteroides caccae ATCC 43185]
 gi|149128398|gb|EDM19617.1| hypothetical protein BACCAC_03373 [Bacteroides caccae ATCC 43185]
          Length = 247

 Score =  186 bits (472), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 114/247 (46%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G      G   +   + + F    + ++  +GV+ + +V+LISF  GAVI  
Sbjct: 1   MIKALRTVGRYFMLMGRTFSRPERMRMFFRQYLNELEQLGVNSIGIVLLISFFIGAVITI 60

Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +++  ++  + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 61  QIKLNIESPWMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I A++  +P+L   + F+ IIGA    W    +           
Sbjct: 121 LEIMGVNSANYLILPKIAAMVTVIPILVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQY 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                 I+ G+IK+ F A  I  V+   G+ V   S ++GK  T  VV S  +++  D +
Sbjct: 181 MFNEWFIWAGIIKSLFFAFIIASVSAFFGYTVEGGSIAVGKASTDSVVSSSVLILFADLI 240

Query: 364 FAIFYFA 370
                  
Sbjct: 241 LTKLLMG 247


>gi|331699196|ref|YP_004335435.1| hypothetical protein Psed_5449 [Pseudonocardia dioxanivorans
           CB1190]
 gi|326953885|gb|AEA27582.1| protein of unknown function DUF140 [Pseudonocardia dioxanivorans
           CB1190]
          Length = 259

 Score =  185 bits (471), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 106/240 (44%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G + +   +    +++    L   I Q ++V         L +   GA IA   A    
Sbjct: 14  VGQLFALGVDIVRMTFRRPFQLGEYIEQTWFVTKVSALPTALFTIPFGATIALLLAELTR 73

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           QFGA+  +     +  +++   ++TA++I+G  GSA+ A++G+  I EEI A+  +G+  
Sbjct: 74  QFGAQSQTGAGSVLAIVQQAAPIVTALLISGAGGSAVCADLGARTIREEIAAMEVLGISP 133

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           ++ L+ PR+ A+  +  +L  LA    + G               + + F + A +++I 
Sbjct: 134 IQRLVVPRVLAMATTALVLNGLATVVGVAGGYFFNVVVQGGTPGAYIASFSAIAQVSDIV 193

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
              +KA       G+VA   G      +  +G  V   VV S  +V +I+ +    Y  I
Sbjct: 194 VSEVKAALFGFTAGVVAAYRGLNPPPGAKGVGDAVNQAVVISFVLVFLINLILTALYLQI 253


>gi|88803715|ref|ZP_01119239.1| hypothetical protein PI23P_00445 [Polaribacter irgensii 23-P]
 gi|88780448|gb|EAR11629.1| hypothetical protein PI23P_00445 [Polaribacter irgensii 23-P]
          Length = 246

 Score =  185 bits (471), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 57/239 (23%), Positives = 102/239 (42%), Gaps = 1/239 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL- 190
           +G              KF  F  +L++++  +G+  + +++ ISF  G VIA Q A  L 
Sbjct: 7   VGKYFMMLRLVFKRPQKFHIFYTALMKEIEDLGLKSIGIIMFISFFIGGVIALQTALNLD 66

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
           S F  +           + E       +++AG+ GS I + IG+M++ E+IDA+  MG++
Sbjct: 67  SPFIPDSLIGFAAKRSIILEFAPTFCCIILAGKVGSYITSSIGAMRVTEQIDALEVMGIN 126

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
            +  L+ P+I A +   P L ILA    I G  +            +     +      I
Sbjct: 127 ALNFLVLPKILAALFFYPFLIILAMVLGIFGGWLAGVASGLFSGVDYIIGIQTEFNSFLI 186

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              +IK    +  I  V    G+ V   S ++G+  T  VV +  +++I + +      
Sbjct: 187 VYAMIKTLVFSFIIATVPAYHGYYVKGGSIAVGRASTQAVVWTTILIVISNYILTQLLL 245


>gi|255693535|ref|ZP_05417210.1| ABC transporter, permease [Bacteroides finegoldii DSM 17565]
 gi|260620673|gb|EEX43544.1| ABC transporter, permease [Bacteroides finegoldii DSM 17565]
          Length = 247

 Score =  185 bits (470), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 114/247 (46%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G      G   +   + + F    + ++  +GV+ + +V+LISF  GAVI  
Sbjct: 1   MIKALRTVGRYFMLMGRTFSRPERMRMFFRQYLNELEQLGVNSIGIVLLISFFIGAVITI 60

Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +++  ++  + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 61  QIKLNIESPWMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I A++  +P+L   + F+ IIGA    W    +           
Sbjct: 121 LEIMGVNSANYLILPKITAMVTVIPILVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQY 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                 I+ G+IK+ F A  I  V+   G+ V   S ++GK  T  VV S  +++  D +
Sbjct: 181 MFNEWFIWAGIIKSLFFAFIIASVSAFFGYTVDGGSIAVGKASTDSVVSSSVLILFADLV 240

Query: 364 FAIFYFA 370
                  
Sbjct: 241 LTKLLMG 247


>gi|213584877|ref|ZP_03366703.1| hypothetical protein SentesTyph_28030 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 179

 Score =  185 bits (470), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 57/177 (32%), Positives = 94/177 (53%), Gaps = 1/177 (0%)

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
           AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+  E++ ++  M +D +R 
Sbjct: 2   AETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRR 61

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTG 313
           +ISPR WA +ISLPLLTI+     I G S+V   +  I    F+S   +      ++   
Sbjct: 62  VISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGFFWSAMQNAVDWRMDLVNC 121

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           LIK+   A  +  +A+  G+     S  + +  T  VV +   V+ +D +     F 
Sbjct: 122 LIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASLAVLGLDFVLTALMFG 178


>gi|325281943|ref|YP_004254485.1| hypothetical protein Odosp_3346 [Odoribacter splanchnicus DSM
           20712]
 gi|324313752|gb|ADY34305.1| protein of unknown function DUF140 [Odoribacter splanchnicus DSM
           20712]
          Length = 245

 Score =  185 bits (470), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 60/243 (24%), Positives = 111/243 (45%), Gaps = 1/243 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
             + LG  +    +  +   K   +   +I +   +G++ + +V++ISF  GAV+  Q A
Sbjct: 3   FLYKLGSYLIFIRKAFSRPEKRSVYTKEVIVEFEKLGLNSIVLVVIISFFIGAVLTLQTA 62

Query: 188 FQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           + +       +    L     L E    + ++++AG+ GS I +EIGSM+I E+I+A+ T
Sbjct: 63  YNMQSPLLPRYLIGYLTRETMLLEFSSTIVSLILAGKIGSNIASEIGSMRITEQIEALET 122

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG++ V  L+ P+I A ++  P+L I + F  I+G  I       + F  F    H +  
Sbjct: 123 MGVNSVSYLVGPKILASLVINPILYIFSVFIGILGGIISGLISGVVNFEDFVYGLHFSFN 182

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
              +   ++K  F A     +    G+ V   +  +GK  T  VV S   ++  + +   
Sbjct: 183 PYYVTYSIVKTLFFAFIFTSIPAFYGYYVQGGAREVGKAGTKAVVDSSIAILTANLVLTQ 242

Query: 367 FYF 369
              
Sbjct: 243 IML 245


>gi|330444642|ref|YP_004377628.1| ABC transporter permease [Chlamydophila pecorum E58]
 gi|328807752|gb|AEB41925.1| ABC transporter, permease protein [Chlamydophila pecorum E58]
          Length = 271

 Score =  185 bits (470), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 65/228 (28%), Positives = 112/228 (49%), Gaps = 1/228 (0%)

Query: 142 FCASSYKFKGFLLSLI-RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSI 200
               S+ FK  L   +  Q Y +GVS +PVVIL   +TG V+A Q  +QL  +G      
Sbjct: 40  AVVKSFSFKKCLFHAVCVQGYAIGVSSLPVVILTGVITGVVLALQSYYQLGVYGLSCAIG 99

Query: 201 DLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRI 260
             +    L EIG +LTA+ ++GR G AI A +G++++ E+I A+ ++G++ +     PRI
Sbjct: 100 FFVVKSILVEIGPVLTALALSGRVGGAIAAFLGTLRMTEQISAMSSLGVNPLEYFALPRI 159

Query: 261 WALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320
            A II++P L I+A +S I    ++    + IP   ++          ++F  ++K+   
Sbjct: 160 IAGIITMPALVIIAVWSGIFSGYMICRYAFQIPSQEYWYMVAGHILPFDVFMVIVKSLIF 219

Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
              I  +A  +G         + +  T  VV S   +I I+ +    +
Sbjct: 220 GFFITSLACYQGLGRYRRITGVTEVTTEGVVISYVSIIFINCVITTIF 267


>gi|302036847|ref|YP_003797169.1| putative ABC transporter permease [Candidatus Nitrospira defluvii]
 gi|300604911|emb|CBK41244.1| putative ABC transporter, permease component [Candidatus Nitrospira
           defluvii]
          Length = 291

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 62/262 (23%), Positives = 124/262 (47%), Gaps = 2/262 (0%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
           +  + +   +G+K +       + A +    + +      +       L  L+RQ+ + G
Sbjct: 28  DGLQRMIEWVGRKAIAGYTYLAALATLFTQAVLDL--LLPTRQGRGETLRVLVRQILFTG 85

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
           V  +PV  +I+ + G +I  Q   QL + GA      ++ +  +RE+G L+TA ++ GRS
Sbjct: 86  VDALPVTTVIALLLGIIIVTQAGTQLPRLGAGGLVGSIIVVTVIRELGPLITAFIVVGRS 145

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           G+AI  E+G+M +  E+ A+R MG+   R +I PR+  +++S+  LT+  +  A++G  +
Sbjct: 146 GTAIATELGNMSVTREVVALRLMGISISRFVIMPRMVGMVLSMLCLTLYFDVVAVLGGYL 205

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
           +      IPF  F        +  ++    IK      A+  +    G AV      + +
Sbjct: 206 IADAQLTIPFYAFVESITKALSTTDVLMTAIKGLSFGSAVAAICCYHGLAVRSSFTEVPQ 265

Query: 345 KVTTCVVQSISIVIIIDSLFAI 366
           + T  ++ S  + ++ID +  +
Sbjct: 266 QTTRAMINSFVLCLLIDVVVTV 287


>gi|291515429|emb|CBK64639.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Alistipes shahii WAL 8301]
          Length = 247

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 63/246 (25%), Positives = 109/246 (44%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                 ++G      G+  +   K   +   +I +M  +GV+ + +  +IS   GAVI  
Sbjct: 1   MLKIFELIGRYFMLMGKVFSRPEKAAIYRRRIIFEMESLGVNSIGLTAIISVFIGAVITL 60

Query: 185 QGAFQL-SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    L S F              + E    + A+++AG+ GS+I +EIG+M+I E+IDA
Sbjct: 61  QMCINLDSPFIPRSLVGYATRETMILEFSSAVVALILAGKVGSSIASEIGTMRITEQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I A ++  P LTIL+    I+G  ++      +  A +      
Sbjct: 121 LEIMGVNSASYLILPKIVAAMVFFPFLTILSILIGILGGYLIAAATGIMIPADYVDGLLM 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +I   LIK  F A  I  ++   G+    +S  +G   T  VV S  ++++ D +
Sbjct: 181 DFKPYSITYTLIKTVFFAYIITSISAFYGYNARGNSLEVGTASTRAVVASCVVILLFDLI 240

Query: 364 FAIFYF 369
                 
Sbjct: 241 LTQVLL 246


>gi|110596847|ref|ZP_01385137.1| Protein of unknown function DUF140 [Chlorobium ferrooxidans DSM
           13031]
 gi|110341534|gb|EAT59994.1| Protein of unknown function DUF140 [Chlorobium ferrooxidans DSM
           13031]
          Length = 264

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 60/239 (25%), Positives = 115/239 (48%)

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                   +      +     +  K   +   ++ Q    G   +P+V++ +   GA++A
Sbjct: 16  QLKDFFLTMQEFFLFSLRTFMAIPKTIRYWRDVLDQATICGTDSIPIVLVSAISIGALLA 75

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
            +    L  FGA+       ++  +RE+G LL  +M++ R GS   AE+G+M+I+E+IDA
Sbjct: 76  IEVGNLLEDFGAKTMLGRSTALSVIRELGPLLMGLMLSARFGSRNGAELGAMQISEQIDA 135

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R  G D +  L+ PR+ A +I    LT L++F+ +  A+ +   Y+ I   +F++  + 
Sbjct: 136 LRAFGTDPIAKLVMPRLVAALIMFLPLTALSDFAGLQSAAYMAEHYHRIDPGIFWNAVYP 195

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
                +   G +KAP  A  I +V+   GF+    +  +G+     +V S  +V+I + 
Sbjct: 196 RLAPKDFVVGFLKAPVFAVIITLVSSFNGFSARGGTAGVGRATIKGIVVSSGLVLIANF 254


>gi|21673166|ref|NP_661231.1| hypothetical protein CT0327 [Chlorobium tepidum TLS]
 gi|21646245|gb|AAM71573.1| conserved hypothetical protein [Chlorobium tepidum TLS]
          Length = 252

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 62/247 (25%), Positives = 119/247 (48%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +           A+  K K +   ++ Q +  GV  +P+V++ S   GA+++ 
Sbjct: 4   FKELVLTMQEFFYFALRAFATLPKAKRYWRDVLDQAFICGVESIPIVLVSSISIGALMSM 63

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           +    L +FGA+       S   LRE+G LL  +M++ R G+   AE+G+M+I+E+IDA+
Sbjct: 64  EVGNLLEEFGAKTMLGRSTSNAVLRELGPLLMGLMLSARYGARNGAELGAMQISEQIDAL 123

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R  G D +  L+ PR+ A +I    L  L++F+ +   ++V   Y+ +   +F++  +  
Sbjct: 124 RAFGTDPIAKLVMPRLLAALIMFVPLIALSDFAGLQTGALVAQYYHKLDPGIFWNSIYPR 183

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               +     +KAP  A  I +V+   GF+    +  +G+     +V S  +V++ +   
Sbjct: 184 LLPMDFVVSFLKAPVFAIIITLVSSFNGFSARGGTAGVGRSTIKGIVASSGLVLVANFYV 243

Query: 365 AIFYFAI 371
           +   F I
Sbjct: 244 SKLVFDI 250


>gi|284039999|ref|YP_003389929.1| hypothetical protein Slin_5158 [Spirosoma linguale DSM 74]
 gi|283819292|gb|ADB41130.1| protein of unknown function DUF140 [Spirosoma linguale DSM 74]
          Length = 243

 Score =  184 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 60/239 (25%), Positives = 109/239 (45%), Gaps = 1/239 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G      G    +  K   +L  +I +   +GV  + +V L++   GAV   Q A+ L+
Sbjct: 4   IGSYFLFLGTLFRNREKLSVYLGLIINECTSIGVGSIFIVALVNIFIGAVTCVQTAYNLT 63

Query: 192 QFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
                 + I L+     + E+   L+ +++AG+ GS I +E+G+M+I E++DA+  MG++
Sbjct: 64  NPFVPKYIIALIVRDSSILELAPTLSCIVLAGKVGSNIASELGTMRITEQVDALEVMGIN 123

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
               LI P++ A ++  PLL I+A F AI+G  I       I    + +          +
Sbjct: 124 SSSYLILPKVIASVLMFPLLVIMAAFLAILGGYIAGTLAGVISAEEYVTGLRFDYKPFGV 183

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              LIK    A  I  ++  +G+ V   +  +G   T+ V  S   ++  D +      
Sbjct: 184 AFALIKTVVFAFLISTISAFQGYNVSGGALEVGAASTSAVTNSCIAIVAADFVLTQLLL 242


>gi|297518302|ref|ZP_06936688.1| toluene ABC transporter, permease protein [Escherichia coli OP50]
          Length = 174

 Score =  184 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 54/173 (31%), Positives = 92/173 (53%), Gaps = 1/173 (0%)

Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258
              L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+  E++ ++  M +D +R +ISP
Sbjct: 1   MGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISP 60

Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKA 317
           R WA +ISLPLLT++     I G S+V   +  I    F+S   +      ++   LIK+
Sbjct: 61  RFWAGVISLPLLTVIFVAVGIWGGSLVGVSWKGIDSGFFWSAMQNAVDWRMDLVNCLIKS 120

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
              A  +  +++  G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 121 VVFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 173


>gi|326333402|ref|ZP_08199648.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
 gi|325948798|gb|EGD40892.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
          Length = 275

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 50/241 (20%), Positives = 105/241 (43%), Gaps = 6/241 (2%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVILISFVTGAVIAQQ 185
           LG  +     F  +  ++K  +L ++ ++        V    V V++ ++F TGA +   
Sbjct: 22  LGFYLRAVSWFPRTLRRYKKEILRILAEVTLGSGALAVIGGTVGVILAMTFFTGAQVGLS 81

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           G   L Q G   FS  + +    REI  L+  + +A   G    A++G+M+I+EE+DA+ 
Sbjct: 82  GYTALDQLGTSAFSGFVSAYFNTREIAPLVAGIALAATVGCGFTAQLGAMRISEEVDALE 141

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            M +  +  L++ R+   +I++  L ++   S+ +     +  +Y      +   F++  
Sbjct: 142 VMAIPSLPFLVTTRMIGGLIAIVPLYVVGLLSSYVATRFTVILFYGQSAGTYDHYFNTFL 201

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
              ++     K    A  + ++    G+        +G  V   V  SI  V ++D + +
Sbjct: 202 PPVDVLWSFGKVLIFAVVVILIHCYHGYNASGGPAGVGVAVGKAVRTSIVAVSVLDLMLS 261

Query: 366 I 366
           +
Sbjct: 262 M 262


>gi|311744833|ref|ZP_07718629.1| ABC superfamily ATP binding cassette transporter membrane protein
           [Aeromicrobium marinum DSM 15272]
 gi|311311950|gb|EFQ81871.1| ABC superfamily ATP binding cassette transporter membrane protein
           [Aeromicrobium marinum DSM 15272]
          Length = 292

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 51/273 (18%), Positives = 103/273 (37%), Gaps = 1/273 (0%)

Query: 94  KNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFL 153
             QK  R             +G  +            ++  V      +    ++    +
Sbjct: 8   DPQKDARPSLVQRASAAPVKLGNGLDDLGKQMLFYLRVIKSVPRTIKNYSREIFRLLAEV 67

Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
                 +  VG   V V+  + F TG  +  QG   L Q G    S  + +    REI  
Sbjct: 68  TFGSGSLALVG-GTVGVIAAMCFFTGTEVGLQGYAALDQLGTSALSGFVSAYFNTREIAP 126

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           ++  + +A   G    A++G+M+I+EE+DA+  M +  +  L++ R+ A +I++  L I+
Sbjct: 127 IVAGIALAATVGCGFTAQLGAMRISEEVDALEVMAIPSLPFLVTTRVIAGLIAVIPLYIV 186

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
              S+     + + + Y      +   F +     ++     K    A  + ++    G+
Sbjct: 187 GLLSSYFATRLTVTQVYGQSSGTYDHYFTTFLPPGDVLWSFAKVLIFAVVVILIHCYYGY 246

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
                   +G  V   V  SI  + ++D L ++
Sbjct: 247 YASGGPAGVGVAVGLAVRTSIVAINVVDLLASM 279


>gi|78188458|ref|YP_378796.1| putative ABC transport system permease protein [Chlorobium
           chlorochromatii CaD3]
 gi|78170657|gb|ABB27753.1| putative ABC transport system permease protein [Chlorobium
           chlorochromatii CaD3]
          Length = 264

 Score =  183 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 64/251 (25%), Positives = 118/251 (47%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I K    +      +      +     +  K   +   +  Q    G   +P+V++ S 
Sbjct: 9   SINKLSAQAKEFFFTMQEFFLFSLRAFMAIPKMGRYWRDVFDQATICGTDSIPIVLVSSI 68

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             GA++A +    L  FGA+       ++  +RE+G LL  +M++ R GS   AE+G+M+
Sbjct: 69  SIGALLAVEVGNLLEDFGAKTMLGRSTALSVIRELGPLLMGLMLSARFGSRNGAELGAMQ 128

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           I+E+IDA+R  G D V  L+ PR+ A ++    LT L++F+ +  A+ +   Y+ I   +
Sbjct: 129 ISEQIDALRAFGTDPVAKLVMPRLVAALVMFLPLTALSDFAGLQSAAYMAEHYHHIDAGI 188

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           F++  +    L +   G +KAP  A  I +V+   GF     +  +G+     +V S  +
Sbjct: 189 FWNAVYPRLVLKDFVLGFLKAPVFAVIITLVSSFNGFNARGGTAGVGRATIKGIVVSSGL 248

Query: 357 VIIIDSLFAIF 367
           V+I +   +  
Sbjct: 249 VLIANFYVSKL 259


>gi|189502390|ref|YP_001958107.1| hypothetical protein Aasi_1030 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497831|gb|ACE06378.1| hypothetical protein Aasi_1030 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 229

 Score =  183 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 53/222 (23%), Positives = 99/222 (44%), Gaps = 1/222 (0%)

Query: 149 FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF-SIDLMSILQ 207
           +K +    I +   +G+  + +V ++S   GAV   Q ++ L    A+ F     +  + 
Sbjct: 8   WKTYFQQTIDECINIGICSITIVSIVSIFIGAVTCIQISYNLKSPFAQDFLVGFGVRNMV 67

Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267
           + E+   + A++ AG+ GS I +++GSM+I E+IDA+  MG++    L+ P+I A I   
Sbjct: 68  ILELAPTVMAIIFAGKVGSNIASQLGSMRITEQIDALEVMGINPTTYLVLPKIIASIFMY 127

Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327
           PLL IL+   AI    +       +    +            I   + K+   A  +  +
Sbjct: 128 PLLVILSGSLAIYSGYLAAKFVLTMAAEDYIYGIRFMFEPYTIQFAIYKSIAFAFLVSSI 187

Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           A  +GF V   + ++G+  T  V  S   ++  D +      
Sbjct: 188 ASYKGFYVFRGAVAVGQASTEAVTNSCIAILAADYVLTQLLL 229


>gi|167753066|ref|ZP_02425193.1| hypothetical protein ALIPUT_01336 [Alistipes putredinis DSM 17216]
 gi|167659380|gb|EDS03510.1| hypothetical protein ALIPUT_01336 [Alistipes putredinis DSM 17216]
          Length = 247

 Score =  183 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 57/246 (23%), Positives = 105/246 (42%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                 ++G      G+  +   K   +   +I +M  +G++ + +  +IS   GAVI  
Sbjct: 1   MLKIFELIGRYFILMGKVFSRPEKRAIYRRRIIYEMESLGLNSIGLTAIISVFIGAVITL 60

Query: 185 QGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q +  L       +          + E    + A+++AG+ GS+I +EIG+M+I E+IDA
Sbjct: 61  QMSINLESPFIPKYIIGYATRETMILEFSSTVVALILAGKVGSSIASEIGTMRITEQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I A ++  P L IL+    I G  ++      +    +      
Sbjct: 121 LEIMGVNSASYLILPKIVATVLFFPFLAILSILIGIAGGYLISALTGIMIPDDYVQGLLY 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +I   LIK    A  I  ++   G+    +S  +G   T  VV S  +++I + +
Sbjct: 181 DFRPYSITYTLIKMAVFAFIITSISAFYGYYAKGNSLEVGAASTKAVVASSIVIMIFNLI 240

Query: 364 FAIFYF 369
                 
Sbjct: 241 LTQILL 246


>gi|189423561|ref|YP_001950738.1| hypothetical protein Glov_0490 [Geobacter lovleyi SZ]
 gi|189419820|gb|ACD94218.1| protein of unknown function DUF140 [Geobacter lovleyi SZ]
          Length = 257

 Score =  183 bits (465), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 63/228 (27%), Positives = 118/228 (51%), Gaps = 1/228 (0%)

Query: 141 EFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSI 200
           +     +    +      Q   +G S + + +L    TG V+A Q   QL  F A  +  
Sbjct: 27  QAFVRIFHKPYYYRDFAIQFDKLGFSSLFICVLTGLFTGMVMALQALIQLKPFAATSYVG 86

Query: 201 DLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRI 260
            ++++  ++E+G +L A+M+AGR GSAI AE+G+M + E++DA+R  G D ++ L++PR+
Sbjct: 87  GMVAVTMIKELGPVLAALMVAGRVGSAITAELGTMVVTEQVDAMRVEGTDIIQRLVTPRL 146

Query: 261 WALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320
            A++++LPLLTI+ +  +++G  ++    Y I   ++ S F       +   G+ K    
Sbjct: 147 KAMLLALPLLTIITDAVSMLGGYLIASG-YSISPVMYLSTFTQFMVPLDYLEGVTKPLVF 205

Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           A  I +++ + G   G  +  +G      VV S  +V++ D   A  +
Sbjct: 206 AFLITMISCQTGLNTGGGAEGVGAAAKRAVVLSSVLVLMCDFFIAKIF 253


>gi|300789441|ref|YP_003769732.1| ABC transporter permease [Amycolatopsis mediterranei U32]
 gi|299798955|gb|ADJ49330.1| ABC transport system permease protein [Amycolatopsis mediterranei
           U32]
          Length = 264

 Score =  183 bits (465), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 58/252 (23%), Positives = 109/252 (43%), Gaps = 4/252 (1%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           K  N       +  + +          Y+ + F+L    Q +++    +   IL+S   G
Sbjct: 11  KAANGLREFGRMCAMGLDVLLAMLRRPYQVREFVL----QFWFIASVSITPAILVSIPFG 66

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           AVI+ Q     SQ GA+ F+     +  +++   ++T ++IAG  GSAI A++G+  I E
Sbjct: 67  AVISLQLGSLTSQIGAQQFNGAASVLAVVQQASPIVTTLIIAGAGGSAICADLGARSIRE 126

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EI A+  +G+  +  L+ PR+ A +    LL  L +   ++G               + +
Sbjct: 127 EIAAMEVLGVSPIHRLVVPRVQAAVGVSVLLNGLVSVVGVLGGYFFGVIIQGGTPGAYLA 186

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
            F++ A L ++    IKA       G+VA   G         +G  V   VV +  ++  
Sbjct: 187 SFNALAQLPDLVVSSIKAVIFGYLAGVVAAYRGLNPKGGPKGVGDVVNQSVVITFLLLFF 246

Query: 360 IDSLFAIFYFAI 371
           ++++    Y  +
Sbjct: 247 VNTVLTALYLQL 258


>gi|119714948|ref|YP_921913.1| hypothetical protein Noca_0701 [Nocardioides sp. JS614]
 gi|119535609|gb|ABL80226.1| protein of unknown function DUF140 [Nocardioides sp. JS614]
          Length = 261

 Score =  183 bits (465), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 56/252 (22%), Positives = 115/252 (45%), Gaps = 4/252 (1%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           + +    +        +          ++ + F    I+Q +++    +    L++   G
Sbjct: 8   RALAPVGTAGKFFAFGLDVMRALFKRPFQLREF----IQQAWFIASVTIIPTALVAIPFG 63

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           AVIA Q    + QFGA+ F+     +  +++   + TA++IAG  GSAI A++G+ KI E
Sbjct: 64  AVIALQVGGLIKQFGAQSFTGSASVLAVVQQAAPIGTALLIAGAGGSAIAADLGARKIRE 123

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DA+  +G+D ++ L+ PR+ A ++    L  L +   + G  +      D     + +
Sbjct: 124 ELDAMMVLGIDPIQRLVVPRVLAAMLVAVFLNGLVSVVGVAGGYVFNVILQDGTPGAYLA 183

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
            F + + L +++ G+ KA        +VA  +G         +G  V   VV +  ++ I
Sbjct: 184 SFTALSQLPDLWQGMAKALVFGLIAAVVACYKGMNAAGGPKGVGDAVNESVVVTFILLFI 243

Query: 360 IDSLFAIFYFAI 371
           ++ + +  Y  +
Sbjct: 244 VNFVMSAIYIQL 255


>gi|313677561|ref|YP_004055557.1| hypothetical protein Ftrac_3477 [Marivirga tractuosa DSM 4126]
 gi|312944259|gb|ADR23449.1| protein of unknown function DUF140 [Marivirga tractuosa DSM 4126]
          Length = 243

 Score =  183 bits (465), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 58/243 (23%), Positives = 108/243 (44%), Gaps = 1/243 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G      G        F  +    I +   +G + + +V + S   GAV   Q A+
Sbjct: 1   MKSIGAYFIFLGSMFVRRESFSSYFKLTINECISIGWNSILIVAITSTFMGAVTTVQTAY 60

Query: 189 QLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            L     + + +  ++  + + E+   +TA++IAG+ GS+I   +G+M+I E+IDA+  M
Sbjct: 61  NLVSPLIQNYVVAQVTREMVVLELAPTITAIVIAGKVGSSIAGGLGTMRITEQIDALEVM 120

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    L+ P+I A +I  PLL ++A F A+ G  I       +    +          
Sbjct: 121 GVNASSYLVLPKIVAAMIMYPLLVVIAGFLALYGGYIAGTLTGILTETEYVYGIRIDFNP 180

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             +   LIK+   A  I  ++  +GF     +  +G+  T+ V +S   V++ D + A  
Sbjct: 181 FTVQFALIKSLVFAFLIASISAFQGFFTTGGALEVGQSSTSAVTKSCIAVLLADYILAEL 240

Query: 368 YFA 370
              
Sbjct: 241 LLN 243


>gi|194334499|ref|YP_002016359.1| hypothetical protein Paes_1694 [Prosthecochloris aestuarii DSM 271]
 gi|194312317|gb|ACF46712.1| protein of unknown function DUF140 [Prosthecochloris aestuarii DSM
           271]
          Length = 264

 Score =  183 bits (464), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 63/240 (26%), Positives = 115/240 (47%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                    +      +     +  K + +    + Q    G   +P+V++ S   GA++
Sbjct: 15  QSMKEFFLTMQEFFFFSVRAFVTLPKLRRYWRDFLDQATIAGTDSIPIVLVSSISIGALL 74

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A +    L  FGA+       ++  +RE+G LL  +M++ R GS   AE+G+MKI+E+ID
Sbjct: 75  AVEVGNLLEDFGAKTMLGRSTALSVIRELGPLLMGLMLSARYGSRNGAELGAMKISEQID 134

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R  G D V  L+ PR+ A +I    LT +A+F+ +  A+ +   Y+ I   +F++   
Sbjct: 135 ALRAFGTDPVAKLVMPRLAAALIVFIPLTAIADFAGLHSAAWLAEHYHKIDPGIFWNAVF 194

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L +   G +KAP  A  I +V+   GF+    +  +G+     +V S  +++I + 
Sbjct: 195 PRLVLKDFVVGFLKAPVFAIIITLVSSFNGFSATGGTAGVGRSTIKGIVVSSGLILIANF 254


>gi|226227980|ref|YP_002762086.1| putative transporter [Gemmatimonas aurantiaca T-27]
 gi|226091171|dbj|BAH39616.1| putative transporter [Gemmatimonas aurantiaca T-27]
          Length = 264

 Score =  183 bits (464), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 68/244 (27%), Positives = 112/244 (45%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           +    H  G       +          ++   IRQM  +GV  VP+ ++++   G V A 
Sbjct: 15  TAGLLHAFGRRAYFARDIARGLRDPGTWIPETIRQMQRIGVESVPLTVIVAAFLGGVTAF 74

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q  +QL           +     + E+G LLTA+++ GR G+ + AEIG+M++ E+IDA+
Sbjct: 75  QTRYQLFPGVQLSVVGLIARQSIVLELGPLLTALVLTGRVGARMTAEIGTMRVTEQIDAL 134

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            T+  D V  L +PR  A ++ LP L +LAN +AI  A   +    D+  + F       
Sbjct: 135 ETLAFDPVAYLATPRFIAGVVMLPTLVMLANATAIFSAWATLVLATDVRTSDFLGGLRLA 194

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            T   +   LIKA     AI  V   EG+     +  +GK     VV +   ++++D++ 
Sbjct: 195 FTAFQVVYSLIKATCFGAAIAFVCSYEGYVTEAGAEGVGKSTALAVVIASVSILVLDAIV 254

Query: 365 AIFY 368
           A   
Sbjct: 255 AAVL 258


>gi|54027028|ref|YP_121270.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54018536|dbj|BAD59906.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 284

 Score =  183 bits (464), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 57/234 (24%), Positives = 98/234 (41%)

Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
              E   +    +      IRQ  ++        + ++     V++ Q    ++Q GA  
Sbjct: 45  AVIELFRALAARRFPYHEFIRQCAFMSNVSAAPTVFVAIPIAVVVSIQVGALVNQVGATT 104

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
           F   +  +  +R+   L+T++MIAG  GSAI A++GS  I EEIDA+  MG++ VR L++
Sbjct: 105 FIGAVAGLGIIRQGAPLVTSLMIAGAVGSAICADLGSRTIREEIDAMMVMGVNPVRRLVA 164

Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
           PR+ A ++   LL     F     A +            F   F S A  +++   L+KA
Sbjct: 165 PRLVAAVLVSMLLCGFIVFVGFATAYMFNVYAQSGTPGSFIGSFASFAVASDLIVALVKA 224

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
                   I+A   G         +   V + VV S  ++   + +    Y  +
Sbjct: 225 AIFGALTAIIACDIGLHAKGGPGGVANAVNSAVVTSALMLFATNIILTQLYNTL 278


>gi|255534289|ref|YP_003094660.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Flavobacteriaceae
           bacterium 3519-10]
 gi|255340485|gb|ACU06598.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Flavobacteriaceae
           bacterium 3519-10]
          Length = 250

 Score =  183 bits (464), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 59/249 (23%), Positives = 103/249 (41%), Gaps = 3/249 (1%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +    +G       +      K   F    +R+++ +GV+   +V+  S   GAV+A 
Sbjct: 2   FKNLLSQIGAYFLLLSKTMKRPQKSSVFGKLFMREIHDLGVNSFGLVLFTSTFVGAVVAI 61

Query: 185 QGAFQLSQ---FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           Q     S         F      ++ + E    + +V++AG+ GS I + IG+M++ E+I
Sbjct: 62  QMFNNFSASSFPIPNSFIGYATKVVLILEFAPTIISVILAGKVGSYIASSIGTMRVTEQI 121

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  MG++    LI P+I A II  PLL  ++    I G  +          A + +  
Sbjct: 122 DALDIMGVNSPNFLILPKILASIIFNPLLIAISIVFGIWGGYLAGIATGSWSKADYITGI 181

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                   I+    K    A  I  V    G+ V   S  +G+  T  VV +I  +II +
Sbjct: 182 QMYMPQHFIWYAFFKTAVFAFLIATVPAYFGYNVKGGSLEVGRASTQAVVWTIVAIIITN 241

Query: 362 SLFAIFYFA 370
            +    + +
Sbjct: 242 LILTQMFLS 250


>gi|118619254|ref|YP_907586.1| membrane protein YrbE4A [Mycobacterium ulcerans Agy99]
 gi|118571364|gb|ABL06115.1| conserved membrane protein YrbE4A [Mycobacterium ulcerans Agy99]
          Length = 279

 Score =  183 bits (464), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 52/256 (20%), Positives = 102/256 (39%), Gaps = 1/256 (0%)

Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171
             +G+   + I      A  +G     + +   ++++        + Q + V    +   
Sbjct: 18  RRLGRGT-ELIQQLAVPARAVGGFFEMSIDTARAAFRRPFQFREFLDQTWMVARVSLVPT 76

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
           +L+S     ++A      L + GA   S    +   + ++G ++T +++AG   +AI A+
Sbjct: 77  LLVSIPFTVLVAFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICAD 136

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           +G+  I EEIDA+R +G+D ++ L+ PR+ A  +   LL  L     + G          
Sbjct: 137 LGARTIREEIDAMRVLGIDPIQRLVVPRVLASTVVALLLNGLVCAIGLSGGYAFSVFLQG 196

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
           +    F +       L  +    IKA       G+V    G  V      +G  V   VV
Sbjct: 197 VNPGAFINGLTVLTGLRELILAEIKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVV 256

Query: 352 QSISIVIIIDSLFAIF 367
            +   + +I+ +    
Sbjct: 257 YAFICLFVINVVMTAI 272


>gi|149921452|ref|ZP_01909904.1| ABC-type transport system involved in resistance to organic
           solvents [Plesiocystis pacifica SIR-1]
 gi|149817655|gb|EDM77122.1| ABC-type transport system involved in resistance to organic
           solvents [Plesiocystis pacifica SIR-1]
          Length = 259

 Score =  182 bits (463), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 49/241 (20%), Positives = 104/241 (43%), Gaps = 2/241 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           L   +   G      +         I Q    G   + ++ +++   G  ++ Q      
Sbjct: 19  LVDFVRFVGLALRVQFTRVPPRDVFITQFVDAGWGSLALLTMLTAFAGLNLSVQSYASFE 78

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           +FG +        +  +RE+  ++ AV+   R G+ + A + +M+I+E+I+A+  M +D 
Sbjct: 79  RFGGQDLLGMFAGVGGVRELYPVMAAVVCGARIGANLAASLANMRISEQIEALEVMAVDP 138

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           +  LISPR+WA+ ++LPLL   A+   I  +        D+    F ++      L +I 
Sbjct: 139 LDYLISPRLWAVTLALPLLCGYADVVGIAASYAGAVYQLDLDAGSFMTQIQEQVGLVDIG 198

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGV--HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
            G++K   M   + ++A   G++V     ++ +G      +V      I+++   +   +
Sbjct: 199 AGMLKGLIMGWLVAVIACFHGYSVSKRDGADGVGISTNLAIVHGAVTCIVVNLFLSWLIY 258

Query: 370 A 370
            
Sbjct: 259 G 259


>gi|262201121|ref|YP_003272329.1| hypothetical protein Gbro_1128 [Gordonia bronchialis DSM 43247]
 gi|262084468|gb|ACY20436.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247]
          Length = 268

 Score =  182 bits (463), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 54/256 (21%), Positives = 114/256 (44%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + + +            G ++    +    ++         I+Q +++    +    LI+
Sbjct: 7   RGVDRIAKAGTGALEQTGNIVQLFVDVARQTFVRPFQWREFIQQAWFIASVTILPTALIA 66

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              GA+++ Q    + Q GAE ++     ++ +++   L+T+++IAG +GSA+ A++GS 
Sbjct: 67  IPFGAIVSLQTGSLIKQLGAESYTGAASVLVVIQQGSPLVTSLLIAGAAGSAVAADLGSR 126

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
            I EEIDA+  +G++ ++ L+ PR+ A+++   LL  L     I G              
Sbjct: 127 TIREEIDAMEVLGINPIQRLVVPRVLAMVLVAMLLNGLVAVIGIGGGYFFNVVVQGGTPG 186

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            + + F + A L +++   +KA       G+VA  +G         +G  V   VV +  
Sbjct: 187 AYLASFGALAQLPDLYVSTLKAAIFGVLAGVVAAYKGLHPKGGPKGVGDAVNQSVVITFL 246

Query: 356 IVIIIDSLFAIFYFAI 371
           ++ + + +    Y  I
Sbjct: 247 LLFLANLIITAVYLQI 262


>gi|110638590|ref|YP_678799.1| ABC transporter permease [Cytophaga hutchinsonii ATCC 33406]
 gi|110281271|gb|ABG59457.1| ABC transporter, permease [Cytophaga hutchinsonii ATCC 33406]
          Length = 243

 Score =  182 bits (463), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 1/230 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
               G  +   G       KF  +    I +   +G + + +V ++S   GAV   Q A 
Sbjct: 1   MKSFGKYMILMGSLFVRREKFSVYWKLTIDECILIGTNSIFIVAIVSSFIGAVTCIQTAA 60

Query: 189 QLSQFGAEIFSIDLMSILQ-LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            L      I+ +  +     + E+    T V++AG+ GS+I  ++G+M+I E++DA+  M
Sbjct: 61  NLVSPLVPIYVVASVVREMSILELAPTFTCVVLAGKVGSSIAGQLGTMRITEQVDALEVM 120

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    LI P+I A +I++P+L   A   +I+G  I       I    F          
Sbjct: 121 GINSASYLILPKILASLITIPMLVTFAGLLSILGGYIAGILGNIITTQDFVYGVQIDFNE 180

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            N+   LIKA   A  I  ++  +G+     +  +G+  TT VV S   V
Sbjct: 181 FNVTFALIKAFVFAFLISSISAYQGYFTKGGALEVGQSSTTAVVNSCIGV 230


>gi|229494293|ref|ZP_04388056.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
 gi|229318655|gb|EEN84513.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
          Length = 281

 Score =  182 bits (462), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 55/265 (20%), Positives = 115/265 (43%), Gaps = 9/265 (3%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVS 166
            +  + V  ++    Q      VI++        ++    +  L+ Q+ +       G  
Sbjct: 11  RVSSRTVDGLSRLGDQFTFHARVITSIPATLKRYWR---EVARLVAQVAFGSGTLLAGGG 67

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            V V+  ISF  G+ I  +G   L+  G    S  + +I   RE+  L+ A+ +A + G+
Sbjct: 68  SVVVIFAISFFAGSQIGLEGYRGLNLVGLAPLSGVMSAIANTREVAPLVAAITLAAKVGT 127

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
              A++G+M+I+EEIDA+  M +  +R L++ R+ A +I++  L ++  F++ +  ++ +
Sbjct: 128 GFTAQLGAMRISEEIDALEVMAIPSLRYLVTTRMIAALIAVVPLYLVGLFASYMATALAV 187

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
            +        +   F    +  +I+  LIK    A  + +V    G+        +G+  
Sbjct: 188 IRVKGQSEGTYGYYFSLFLSPNDIWLSLIKVMVFAVVVTLVHCYYGYTATGGPEGVGRAA 247

Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371
              +  SI  +   D    I  + +
Sbjct: 248 GRALRTSIVFLAFTDVAMTIALWGL 272


>gi|134098920|ref|YP_001104581.1| putative ABC-transporter integral membrane protein
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133911543|emb|CAM01656.1| putative ABC-transporter integral membrane protein
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 243

 Score =  182 bits (462), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 59/241 (24%), Positives = 112/241 (46%), Gaps = 4/241 (1%)

Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190
           +  L +          ++F+ F    ++Q +++    +   IL+S   GAVI+ Q     
Sbjct: 1   MFALGLDVAVLMFRRPFQFREF----VQQFWFIASVSITPAILVSIPFGAVISLQLGTLT 56

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
           +Q GA+ F+     +  +++   ++T ++IAG  GSAI A++GS  I EEI A+  +G+ 
Sbjct: 57  AQIGAKSFNGAASVLAVVQQASPIVTTLVIAGAGGSAICADLGSRTIREEIAAMEVLGVS 116

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
            V+ LI PR+ A +++  LL  L +   + G         D     + + F++ A L ++
Sbjct: 117 PVQRLIVPRVLAAVLTAMLLNGLVSVVGVAGGYFFNVIVQDGTPGAYLASFNALAQLPDL 176

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +    KA       G+VA   G      S  +G  V   VV +  ++  ++++    Y  
Sbjct: 177 WVSTFKALIFGFLAGVVAAYRGLNPRGGSKGVGDVVNQSVVITFLLLFFVNTVITALYLQ 236

Query: 371 I 371
           +
Sbjct: 237 L 237


>gi|315635512|ref|ZP_07890778.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Arcobacter butzleri JV22]
 gi|315480270|gb|EFU70937.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Arcobacter butzleri JV22]
          Length = 285

 Score =  181 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 74/266 (27%), Positives = 126/266 (47%), Gaps = 12/266 (4%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
                 W    +  I   +   +    ++    +D + +   D+     ++ F+  +  K
Sbjct: 18  LTLLNIWDKQTLPNIIKKIE--LLNFSKNSKLSIDFANLKGCDSSAIIYLISFLNTFEEK 75

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
                 + + E++F      ++ K+  ++ +  FF          +GKK      +S   
Sbjct: 76  NITILNNKNHEKIFDFYKKHYQTKLLEEEKKNLFF--------EDLGKKSYDIYKESKEF 127

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G V         +  K +    ++++ +       + +V + SF+ G VIA QG+ 
Sbjct: 128 IGFIGKVFYFFIYAIFNPSKIR--FKAMLKYIETSAFDALLIVAVTSFLVGVVIAYQGSV 185

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           QL +FGA IF ++++SI   REI  L+TA++IAGRS S+  AEIG+MKI EEIDA++TM 
Sbjct: 186 QLEKFGANIFIVEMISITMFREIAPLVTAIVIAGRSASSYTAEIGAMKITEEIDAMKTMN 245

Query: 249 LDFVRILISPRIWALIISLPLLTILA 274
            +    L  PRI+AL ISLPLL    
Sbjct: 246 FEPTLFLTLPRIFALCISLPLLVFFC 271


>gi|302338250|ref|YP_003803456.1| protein of unknown function DUF140 [Spirochaeta smaragdinae DSM
           11293]
 gi|301635435|gb|ADK80862.1| protein of unknown function DUF140 [Spirochaeta smaragdinae DSM
           11293]
          Length = 258

 Score =  181 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 69/260 (26%), Positives = 121/260 (46%), Gaps = 3/260 (1%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   +G +++  I +           I  +  F     + +     L+ Q+ + GV  + 
Sbjct: 1   MFQELGHRVIASIRELFYACGFFLRTIKESVPFFR---RRQIGYRVLVMQLLFTGVEALG 57

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V+ LI+ + G VI   G   L QFG       ++  + +RE+G LL A +I  RSG+AI 
Sbjct: 58  VISLIALILGGVIIVYGVDLLPQFGQGELIYSILITVIMRELGPLLCAFIIIARSGTAIA 117

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
            E+G M ++ +I+A  ++G+D +  L+ PR   +I S+ LL I  N   +I +  V    
Sbjct: 118 TELGQMVVSHQIEAYTSVGVDPISYLVVPRFLGVIFSMILLNIYFNLFGLIASFFVTSFI 177

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
             IP   +     +     +I + +IK+      I + A   GF V   S  + + V   
Sbjct: 178 QPIPMRDYMYDLITHIRSVDIVSSMIKSLIFGAIIALSATYNGFRVEQSSTEVPQVVIKA 237

Query: 350 VVQSISIVIIIDSLFAIFYF 369
           VVQS  ++I+ D+L  + Y+
Sbjct: 238 VVQSFVLIIVADALITLIYY 257


>gi|296089608|emb|CBI39427.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  181 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 91/236 (38%), Gaps = 23/236 (9%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
           V    G+        K   ++ ++Q+  VG   V V IL +   G     Q   + ++ G
Sbjct: 107 VFIMAGQVIIRILTGKVHWVNTLQQLERVGPRSVGVCILTAAFVGMAFTIQFVREFTRLG 166

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
                  ++++   RE+  +                       +E+ D +R +G + V  
Sbjct: 167 LNRSVGGVLALAFSRELSPV-----------------------SEQTDTLRVLGTNPVDY 203

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L++PR+ A  I+LP LT+L     +  ++++    Y I   +            +I + +
Sbjct: 204 LVTPRVIASCIALPFLTLLCFTVGMASSALLADSVYGISINIILDSAQRALNSWDIISAM 263

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           IK+      I  V+   G      +  +G+  T+ VV S+  + I D   +  +F 
Sbjct: 264 IKSVAFGGIISTVSCAWGVTTMGGAKGVGESTTSAVVISLVGIFIADFALSYCFFQ 319


>gi|145352678|ref|XP_001420665.1| ABC(membrane) family transporter: toluene tolerance [Ostreococcus
           lucimarinus CCE9901]
 gi|144580900|gb|ABO98958.1| ABC(membrane) family transporter: toluene tolerance [Ostreococcus
           lucimarinus CCE9901]
          Length = 308

 Score =  181 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 56/251 (22%), Positives = 117/251 (46%), Gaps = 5/251 (1%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           KF+  S +   + G V+             +      ++Q+  VG   + V +L S   G
Sbjct: 62  KFLWRSAATGLLFGSVLYRCAR-----QPRRVNWEQTLQQIARVGPQTLGVSLLTSSFVG 116

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V   Q   + ++ G +     L+ +   RE+  ++ A+++ GR GS+I AE+G+M++ E
Sbjct: 117 MVFTIQFCKEFAKVGLKNAIGGLLGLAFARELTPVICAIVLTGRIGSSIAAELGTMQVTE 176

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++D +  +G D V  L+ PR+ A  +SLP+L+I++   A+  + ++    Y +   V   
Sbjct: 177 QVDQLTVLGTDPVDYLVIPRVIACAVSLPILSIISFAQALGASILLADLRYGVSPNVIID 236

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                   ++I     K+      I +++   G      +  +G+  T  VV S++ + +
Sbjct: 237 SAAKYLEPSDIGIMTAKSIAFGAVIAVISCGWGTTTTGGAKGVGESTTASVVISLTAIFV 296

Query: 360 IDSLFAIFYFA 370
           +D + ++ +F 
Sbjct: 297 VDFVLSLVFFQ 307


>gi|146328846|ref|YP_001209755.1| hypothetical protein DNO_0858 [Dichelobacter nodosus VCS1703A]
 gi|146232316|gb|ABQ13294.1| conserved hypothetical membrane protein [Dichelobacter nodosus
           VCS1703A]
          Length = 262

 Score =  181 bits (460), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 68/249 (27%), Positives = 126/249 (50%), Gaps = 2/249 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +Q   L      T +            +  I+ +++ GV  +P++++     G V+A 
Sbjct: 14  VLTQLAALAEFSFLTLQLHWQLSILWRRPMLWIKALFHAGVLSLPIIMVSGLFVGMVLAL 73

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q    +S FGAE  +  L+++  +RE+G ++TA++ AGR+GSAI AEIG MK  E++DA+
Sbjct: 74  QAFINMSLFGAEQSTSTLVALSLMRELGSVVTALLFAGRAGSAITAEIGLMKTTEQLDAM 133

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG++ +  +  PR +  +++LPLL I+   +A++GA  V   +  +   +F+S+    
Sbjct: 134 TMMGVEPLAQIGVPRFFGALLALPLLAIIFVATAMVGAYWVAVPHLGLDNGIFWSQLQRG 193

Query: 305 ATL-ANIFTGL-IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
                NI  G+ +K+         +++ +GF     +  + +  T  VV S   V+ +D 
Sbjct: 194 VGFYQNIVLGIGVKSLVFGWLCAAISVFQGFVCVPTAQGMAQATTKTVVLSSLAVLAVDF 253

Query: 363 LFAIFYFAI 371
           L     FA+
Sbjct: 254 LLTSLMFAL 262


>gi|226304167|ref|YP_002764125.1| YrbE family protein [Rhodococcus erythropolis PR4]
 gi|226183282|dbj|BAH31386.1| putative YrbE family protein [Rhodococcus erythropolis PR4]
          Length = 281

 Score =  181 bits (460), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 55/261 (21%), Positives = 114/261 (43%), Gaps = 9/261 (3%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPV 170
           + V  ++    Q      VI++        ++    +  L+ Q+ +       G   V V
Sbjct: 15  RTVDGLSRLGDQFTFHARVITSIPATLKRYWR---EVARLVAQVAFGSGTLLAGGGSVVV 71

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           +  ISF  G+ I  +G   L+  G    S  + +I   RE+  L+ A+ +A + G+   A
Sbjct: 72  IFAISFFAGSQIGLEGYRGLNLVGLAPLSGVMSAIANTREVAPLVAAITLAAKVGTGFTA 131

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           ++G+M+I+EEIDA+  M +  +R L++ R+ A +I++  L ++  F++ +  ++ + +  
Sbjct: 132 QLGAMRISEEIDALEVMAIPSLRYLVTTRMIAALIAVVPLYLVGLFASYMATALAVIRVK 191

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
                 +   F    +  +I+  LIK    A  + +V    G+        +G+     +
Sbjct: 192 GQSEGTYGYYFSLFLSPNDIWLSLIKVMVFAVVVTLVHCYYGYTATGGPEGVGRAAGRAL 251

Query: 351 VQSISIVIIIDSLFAIFYFAI 371
             SI  +   D    I  + +
Sbjct: 252 RTSIVFLAFTDVAMTIALWGL 272


>gi|326382983|ref|ZP_08204672.1| hypothetical protein SCNU_08601 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326198119|gb|EGD55304.1| hypothetical protein SCNU_08601 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 268

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 54/256 (21%), Positives = 112/256 (43%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + + K            G ++    +     +         I+Q +++    +    LI+
Sbjct: 7   RGVDKLAKAGEGALAQTGNIVQLFVDVARQLFVRPFQWREFIQQAWFIASVTILPTALIA 66

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              GA+++ Q    + Q GAE ++     ++ +++   L+T++++AG +GSA+ A++GS 
Sbjct: 67  IPFGAIVSLQTGSLIKQLGAESYTGAASVLVVVQQGSPLVTSLLVAGAAGSAVAADLGSR 126

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
            I EEIDA+  +G++ V+ L+ PR+ A+++   LL  L     I G              
Sbjct: 127 TIREEIDAMEVLGINPVQRLVVPRVLAMVLVAVLLNGLVAVVGIGGGYFFNVVVQGGTPG 186

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            + + F + A L +++   +KA       G+VA  +G         +G  V   VV +  
Sbjct: 187 AYLASFGALAQLPDLYISTLKAVIFGVIAGVVAAYKGLNPKGGPKGVGDAVNQSVVVTFL 246

Query: 356 IVIIIDSLFAIFYFAI 371
           ++   + +    +  I
Sbjct: 247 LLFFANLIITAVFLQI 262


>gi|300782533|ref|YP_003762824.1| ABC transporter permease [Amycolatopsis mediterranei U32]
 gi|41581797|gb|AAS07741.1| putative ABC-transporter integral membrane protein [Amycolatopsis
           mediterranei S699]
 gi|299792047|gb|ADJ42422.1| ABC transport system permease protein [Amycolatopsis mediterranei
           U32]
          Length = 250

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 54/244 (22%), Positives = 109/244 (44%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
                G + +   +     ++    L   I+Q +++    +    L++   GAVI+ Q  
Sbjct: 1   MLRETGNLFALGLDIVRGLFQRPFQLREFIQQSWFIASVTILPTALVAIPFGAVISLQFG 60

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
               Q GA+ ++     +  +++   L+TA+++AG  GSA+ A+IG+  I EEI A+  +
Sbjct: 61  SLARQLGAQSYTGAGSVLATVQQASPLVTALLVAGAGGSAVCADIGARTIREEIAAMEVL 120

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+  V+ LI PR  A+++   LL  + +   ++G               + + F + A L
Sbjct: 121 GVSAVQRLIVPRTLAMMLVALLLNGMVSVIGVLGGYFFNVVLQGGTPGAYLASFSALAQL 180

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +++ G +KA        +VA   G         +G  V   VV +  ++ +++ +  + 
Sbjct: 181 PDLWVGELKALIFGFIAAVVASYRGLNPSGGPKGVGDAVNQSVVITFLLLFVVNFVITLI 240

Query: 368 YFAI 371
           Y  I
Sbjct: 241 YLQI 244


>gi|269128028|ref|YP_003301398.1| hypothetical protein Tcur_3829 [Thermomonospora curvata DSM 43183]
 gi|268312986|gb|ACY99360.1| protein of unknown function DUF140 [Thermomonospora curvata DSM
           43183]
          Length = 288

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 62/257 (24%), Positives = 119/257 (46%), Gaps = 6/257 (2%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVPVVILIS 175
           ++ +      LG V+ +         K+   LL  I  +        +G   + VV  ++
Sbjct: 25  LSTALDMPVFLGRVLYHLVVDIVLRRKYGKMLLRQISDITVGVGALVIGGGMIFVVATMA 84

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
             TGA++  QG   L + GAE FS  + S   +RE+  ++  V +  + GSA  AEIG+M
Sbjct: 85  MATGAMVGMQGYPSLERIGAEAFSGVMASFANVREVTPIIAGVALIAQVGSAFTAEIGAM 144

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           +I+EEIDA+  MG++ +  L+  R+ A +I+L  L +LA F++     ++  +Y+ +   
Sbjct: 145 RISEEIDALEVMGINSLTFLVCTRVAAGVIALLPLYLLALFASFFATRLITVQYFGLSPG 204

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           ++   F+      ++    IK    A  +  +    G+        +G      + +S  
Sbjct: 205 IYDYYFNLYLPPIDVLYSGIKVAVFAFVVMFIHCYRGYYATGGPVGVGVAAGRAIRESSV 264

Query: 356 IVIIIDSLFAIFYFAIG 372
            +I+I+ L +  ++  G
Sbjct: 265 AIIVINLLLSYIFWGHG 281


>gi|317508868|ref|ZP_07966507.1| hypothetical protein HMPREF9336_02879 [Segniliparus rugosus ATCC
           BAA-974]
 gi|316252829|gb|EFV12260.1| hypothetical protein HMPREF9336_02879 [Segniliparus rugosus ATCC
           BAA-974]
          Length = 304

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 55/279 (19%), Positives = 112/279 (40%), Gaps = 15/279 (5%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
              + +   L   + K +V     +  Q   LGLV+             + +   +  Q+
Sbjct: 23  PPGFRTAVQLQSALRKAVVSGFVSAGHQITFLGLVLGAV------PKTIRHYRRQIGAQL 76

Query: 161 Y---------YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211
                      VG   + +++ +    GA I   G   L   G       + + +  RE+
Sbjct: 77  QDVIWGNGSIIVGGGSIGMLLFMGVCIGASIGVVGFATLDLVGLGPLVGFVSAYVNTREL 136

Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271
             ++TA+  A ++G  I AE+G+M+I+EEIDAI   G+  +  +I+ R+ A +IS+  L 
Sbjct: 137 APMVTAIGFAAQTGCRITAEVGAMRISEEIDAIEAQGIQSIPFVITTRVIAGVISIIPLY 196

Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
           ++      +  + V+   +      ++  F S     ++   ++KA     AI  +   +
Sbjct: 197 VMTTLLGYVSCAFVVNVVHGEASGTYYHYFDSFIHPIDVVYSVVKAIVFVVAIIAIHGYQ 256

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G+        +G      +  S+  V++ D +  I  + 
Sbjct: 257 GYYASGGPEGVGVAAGRAIRTSLITVVVADMVLTIVLWG 295


>gi|302525561|ref|ZP_07277903.1| ABC transporter integral membrane protein [Streptomyces sp. AA4]
 gi|302434456|gb|EFL06272.1| ABC transporter integral membrane protein [Streptomyces sp. AA4]
          Length = 286

 Score =  180 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 102/260 (39%), Gaps = 10/260 (3%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCA-SSYKFKGFLLSLIRQMYYVGVSG-------- 167
           + ++ I    +    LG  +S  G   A S    + +     R +  V            
Sbjct: 14  RTLEIIARPGASLEGLGKQLSFYGRALAWSPRTIRRYGRETTRLLTEVCFGTGGLAVIGG 73

Query: 168 -VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + V+I ++  TG ++  QG   L+Q G    +  + +    RE+  L   + ++   G 
Sbjct: 74  TLGVMIGMTLFTGLIVGLQGYSALNQLGTAALTGFISAYFNTREVAPLSAGLALSATVGC 133

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
              A++G+M+I+EEIDA+  M +  +  L++ R+ A + ++  L  +   S+ + +  + 
Sbjct: 134 GFTAQLGAMRISEEIDALEVMAVPSMPYLVTTRVLAGVTAVIPLYAVGLLSSYLASRQIT 193

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
              Y      +   F       ++     K    +  + +     G+        +G  V
Sbjct: 194 IWLYGQSAGTYDHYFTLFLPPEDVLWSFAKVIVFSVLVILSHCYYGYTASGGPAGVGIAV 253

Query: 347 TTCVVQSISIVIIIDSLFAI 366
              V  SI ++ ++D   ++
Sbjct: 254 GRAVRTSIVLISVLDFFLSL 273


>gi|305664611|ref|YP_003860898.1| hypothetical protein FB2170_17306 [Maribacter sp. HTCC2170]
 gi|88708628|gb|EAR00864.1| hypothetical protein FB2170_17306 [Maribacter sp. HTCC2170]
          Length = 265

 Score =  180 bits (458), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 51/247 (20%), Positives = 103/247 (41%), Gaps = 2/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           S +    +G       E      K+      +++++  +    + ++I ISF  G V+A 
Sbjct: 20  SMNYLASIGSYAIMIKEVFRKPTKWSIMRSLILKEIDELIFGSLGILIFISFFIGGVVAI 79

Query: 185 QGAFQL-SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q A  + S+   +           + E      ++++AG+ GS I + IG+M++ E+IDA
Sbjct: 80  QTALNITSELIPKNLVGFATRQSIILEFAPTFCSIIMAGKVGSYITSSIGTMRVTEQIDA 139

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++ +  L+ P+I AL++  P +  ++ +  I G             A F      
Sbjct: 140 LEVMGVNALNYLVFPKIIALLL-YPFIIAISMYVGIFGGWFAGVFGGFSTSADFVEGVQL 198

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                ++    IK    A  +  +    GF +   +  +GK  TT  V +  ++II++ +
Sbjct: 199 DFIPFHVTYSFIKTLVFAFILATIPSYHGFYMKGGALEVGKAATTSFVWTSVVIIILNYI 258

Query: 364 FAIFYFA 370
                  
Sbjct: 259 LTQLLLG 265


>gi|134103292|ref|YP_001108953.1| putative ABC transport system permease protein [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133915915|emb|CAM06028.1| putative ABC transport system permease protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 269

 Score =  180 bits (458), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 49/257 (19%), Positives = 111/257 (43%), Gaps = 9/257 (3%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVP 169
           ++ ++F++D   Q       +        +  ++    + L+ ++ +      V    V 
Sbjct: 3   RRPLEFLDDLGDQMSF---YLRTLAWIPKAVTRYVKETMRLLAEVSFGSGALAVIGGTVG 59

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V++ ++  TG V+  QG   L+Q G   F+  + +    REI  L+  + ++   GS   
Sbjct: 60  VMVGMTLFTGTVVGLQGYAALNQIGTSAFAGFVSAYFNTREIAPLVAGLALSATVGSGFT 119

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A++G+M+I++EIDA+ TMG+  +  L++ R+ A  +++  L +L   ++ + A +V    
Sbjct: 120 AQLGAMRISDEIDALETMGVPSLPYLVTTRVVAGFVAVVPLYVLGLLTSYLAARLVTVHV 179

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
           Y      +   F+      ++     K    +  + +     G+        +G  V   
Sbjct: 180 YGQSAGTYDHYFNLFLPPEDVLWSFGKVLVFSVVVIMTHCYYGYRASGGPAGVGVAVGRA 239

Query: 350 VVQSISIVIIIDSLFAI 366
           V  +I    ++D   ++
Sbjct: 240 VRTAIVTTALLDFFLSL 256


>gi|84684701|ref|ZP_01012601.1| membrane protein [Maritimibacter alkaliphilus HTCC2654]
 gi|84667036|gb|EAQ13506.1| membrane protein [Rhodobacterales bacterium HTCC2654]
          Length = 244

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 55/243 (22%), Positives = 104/243 (42%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +G V                +   L R    +G   +PVV L +  TGA +A Q  
Sbjct: 1   MLRRIGSVTLFFLNAVIRFPATLRYPRELARAFLQIGWLSLPVVGLTAVFTGAALALQIY 60

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
              S+  AE     +++I  +RE+G ++  +MIA R  S+I AE+ +MK++E++DA+ T+
Sbjct: 61  AGGSRISAEAVVPQIVAIGIVRELGPVMVGLMIAARVTSSIAAELATMKVSEQVDALTTL 120

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
             D +  L +PR+ A ++++P+L  L +   + G  +V  +        + +   +    
Sbjct: 121 STDPMTYLTAPRVLAGLVTVPILVGLGDILGLFGGFVVATQGLGFNGPSYVTTSWNFLDP 180

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +I   L K          +A   G   G  +  +G    + V  +  +V+  +      
Sbjct: 181 VDIVLSLTKGAVFGGIAVTLACHAGLNAGRGAQGVGLATKSAVQAAAILVLAANVALTGL 240

Query: 368 YFA 370
           +F 
Sbjct: 241 FFG 243


>gi|257054443|ref|YP_003132275.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Saccharomonospora viridis
           DSM 43017]
 gi|256584315|gb|ACU95448.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Saccharomonospora viridis
           DSM 43017]
          Length = 279

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 55/264 (20%), Positives = 106/264 (40%), Gaps = 10/264 (3%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCA-SSYKFKGFLLSLIRQMYYVGVSG-- 167
              + + +    N       +LG  +S      A +    + +   ++R +  V      
Sbjct: 1   MARLMQNVKNLANRPLRTLDMLGDQMSFYLRALAWTPRAIRRYSKEVLRLLAEVSFGSGS 60

Query: 168 -------VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
                  V V++ ++  TG ++  QG   L   G   F+  L S    REI  L+  + +
Sbjct: 61  LAVIGGTVGVMVGLTLFTGVLVGLQGFSALDSIGTSAFTGFLTSFFNTREIAPLVAGLAL 120

Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280
           +   GS   A++G+M+I+EE+DA+  MG+  +  L++ RI A  I++  L I+   S+ +
Sbjct: 121 SATVGSGFTAQLGAMRISEEVDALEVMGVPSLPYLVTTRIIAGFIAIIPLYIIGLLSSYL 180

Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
            +  V+   Y      +   F       ++F   +K    +  I +     G+       
Sbjct: 181 ASRTVVVYLYGQSAGTYDHYFDMFLPPEDVFYSFVKVLIFSVLIILTHCYYGYRATGGPA 240

Query: 341 SLGKKVTTCVVQSISIVIIIDSLF 364
            +G  V   V  SI  V +++   
Sbjct: 241 GVGVAVGKAVRLSIVTVAVVNFFI 264


>gi|326333403|ref|ZP_08199649.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1]
 gi|325948799|gb|EGD40893.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1]
          Length = 261

 Score =  180 bits (457), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 58/239 (24%), Positives = 115/239 (48%)

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G + +   +   + ++        I+Q +++    +    L++   GAVIA Q    + Q
Sbjct: 17  GSLFAFGLDVGRAVFRRPFQFREFIQQAWFIASVTIVPTALVAIPFGAVIALQVGGLVQQ 76

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
           FGA+ F      +  +++   + TA+++AG  GSAI A++G+ KI EE+DA+  +G+D +
Sbjct: 77  FGAQSFVGSAAVLAVVQQAAPIATALLVAGAGGSAIAADLGARKIREELDAMMVLGIDPI 136

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
           + L+ PR+ A ++    L  L +   ++G  +            + + F + A +A+++ 
Sbjct: 137 QRLVVPRVLAAMMIAVFLNGLVSIVGVMGGYVFNVIIQGGTPGAYLASFTALAQMADLWQ 196

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           GL KA        IVA  +G   G     +G  V   VV +  ++ I++ + +  +  I
Sbjct: 197 GLAKALVFGLIAAIVAAYKGMNAGGGPKGVGDAVNESVVITFLLLFIVNFVMSAIFLQI 255


>gi|324999480|ref|ZP_08120592.1| hypothetical protein PseP1_11966 [Pseudonocardia sp. P1]
          Length = 246

 Score =  180 bits (456), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 52/242 (21%), Positives = 97/242 (40%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G   +   +   + +K        ++Q ++V    +   IL+     A++  Q    L 
Sbjct: 1   MGSFFAFVADTFVAMFKRPFHWREFVQQTWFVASVSLGPAILLGIPFVALVTFQFNLILV 60

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + GA   S        + +IG + T  +IAG S +AI A+IG+ KI EE+DA+  +G+D 
Sbjct: 61  EIGAIDLSGSGSGFATVTQIGPVATTFIIAGASSTAICADIGARKIREELDAMEVLGIDV 120

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A  ++  LL  +     + G  +            +           ++ 
Sbjct: 121 VHRLVVPRVLATAVNAFLLNGVMILIGLTGGYVFGVYLQGASPGQYVDSLKLLVGFPDLV 180

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
            G I+A        ++    G         +G  V   VV +   +  I+ L     +++
Sbjct: 181 HGEIRAVVFGMVGALIGCYRGMTCAAGPRGVGNAVNETVVYTFLALFPINILLTQIPYSL 240

Query: 372 GI 373
           GI
Sbjct: 241 GI 242


>gi|262196627|ref|YP_003267836.1| hypothetical protein Hoch_3441 [Haliangium ochraceum DSM 14365]
 gi|262079974|gb|ACY15943.1| protein of unknown function DUF140 [Haliangium ochraceum DSM 14365]
          Length = 258

 Score =  180 bits (456), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 62/239 (25%), Positives = 114/239 (47%), Gaps = 7/239 (2%)

Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
           S       +G+  +    D+   A +   V+             +     +I QMY +GV
Sbjct: 2   SPGAPLRALGRSALGLCRDTGGIAALGVEVVRAL-------VPPRIDGRMVIDQMYKMGV 54

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             +P+V L +F  G ++A Q    + Q GA             RE+G ++ A+M +GR G
Sbjct: 55  QSLPIVALAAFFAGVLMALQSGVIVRQLGATSLLGWGGGFAIFRELGPVVIALMFSGRVG 114

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           +   A++G+MKI E++D +R + +D VR L++PRI A++ +L  LTI+ N  A+ G ++ 
Sbjct: 115 ANNAADLGNMKITEQLDGLRALAIDPVRYLVAPRIVAMVGALVSLTIIGNSIALQGGTVF 174

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
               +D+ F   F+      +  ++  G+IK+      I + +   G +V   +  +G+
Sbjct: 175 SMLLFDVEFITLFTSLVDNISPFDLLHGVIKSAVFGVFIALTSCYFGLSVRGGAVGVGR 233


>gi|302523959|ref|ZP_07276301.1| ABC transporter integral membrane protein [Streptomyces sp. AA4]
 gi|302432854|gb|EFL04670.1| ABC transporter integral membrane protein [Streptomyces sp. AA4]
          Length = 278

 Score =  180 bits (456), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 50/261 (19%), Positives = 106/261 (40%), Gaps = 15/261 (5%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG----- 167
            I  + ++ ++    Q    G  +        +    + +   ++R +  V         
Sbjct: 9   RIANRPLETLDTLGDQMSFYGRAL------LWTPRTLRRYTKEVLRLLAEVSFGSGSLAV 62

Query: 168 ----VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
               V V++ ++  TG ++  QG   L+  G   F+  L +    REI  L+  + ++  
Sbjct: 63  IGGTVGVMVGLTLFTGVLVGLQGYSALNSIGTSAFTGFLTAFFNTREIAPLVAGLALSAT 122

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
            G+   A++G+M+I+EEIDA+  MG+  +  L++ RI A  +++  L ++   S+ + + 
Sbjct: 123 VGAGFTAQLGAMRISEEIDALEVMGVPSLPYLVTTRIIAGFVAVIPLYVIGLLSSYLASR 182

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           +V+   Y      +   F       ++    IK    +  I +     G+        +G
Sbjct: 183 LVVIYIYGQSAGTYDHYFDLFLPPQDVLYSFIKVLIFSVLIILSHCYFGYRASGGPAGVG 242

Query: 344 KKVTTCVVQSISIVIIIDSLF 364
             V   V  SI  V +++   
Sbjct: 243 VAVGRAVRLSIVTVSVVNFFI 263


>gi|271964524|ref|YP_003338720.1| resistance to organic solvents ABC transporter permease
           [Streptosporangium roseum DSM 43021]
 gi|270507699|gb|ACZ85977.1| ABC-type transport system involved in resistance to organic
           solvents permease component-like protein
           [Streptosporangium roseum DSM 43021]
          Length = 269

 Score =  180 bits (456), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 52/249 (20%), Positives = 104/249 (41%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
            +  S      +G +     E    ++  + +    I+Q +++       V+L+S   GA
Sbjct: 13  LVRRSTDVFGRVGDMSVIALEGFRRTWDVRTWFWEYIQQCWFLARVTSLPVLLVSLPLGA 72

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
            +A Q      Q GA   +   + +  +RE+  + +A++IAG  GSA+ ++IG+  I +E
Sbjct: 73  TVALQVGQLAWQLGASSATGGAVVVGLVREVAPMASALLIAGAGGSAMTSDIGARNIRDE 132

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           + A+  M ++ +  L++PR+WA      LL  L   +   G          +    +F  
Sbjct: 133 LAAMEVMAVNPIHRLVTPRLWAASTVAVLLVPLVIVAGAGGGYFFNVVIQGVTPGAYFDG 192

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             S    +++   L KA        I++   G         +G+ V    V +  +V  +
Sbjct: 193 AVSLLVTSDLLVTLFKAWIFGFIAAIMSCYFGMTCQTSPVGVGRAVNQSTVVTFMLVFAV 252

Query: 361 DSLFAIFYF 369
           + +  + YF
Sbjct: 253 NYVITMIYF 261


>gi|169631233|ref|YP_001704882.1| hypothetical protein MAB_4155c [Mycobacterium abscessus ATCC 19977]
 gi|169243200|emb|CAM64228.1| Conserved hypothetical protein [Mycobacterium abscessus]
          Length = 255

 Score =  180 bits (456), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 100/245 (40%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
               + A  +G  +S +     + ++        + Q +++    +   +L++     ++
Sbjct: 3   QQLAAPARAVGGFVSMSLATFRNIFRRPFQGQEFLDQTWFIARVSLLPTLLVAIPFTVLV 62

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A      L + GA   S    +   + ++G ++T +++AG   +AI A++G+  I EEID
Sbjct: 63  AFTLNILLREIGAADLSGAATAFGTVTQLGPVVTVLVVAGAGATAICADLGARTIREEID 122

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++ +G+D ++ L+ PR+ A      LL  L     ++G  +       +    F +   
Sbjct: 123 AMQVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGMVGGYVFSVFLQGVNPGAFINGLT 182

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L  +    +KA       G+V    G  V      +G  V   VV +   + +I+ 
Sbjct: 183 VLTGLGELMISEVKAFLFGIFAGLVGCYRGLTVKGGPKGVGDAVNETVVYAFICLFVINV 242

Query: 363 LFAIF 367
           +    
Sbjct: 243 VMTAI 247


>gi|326331738|ref|ZP_08198026.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1]
 gi|325950537|gb|EGD42589.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1]
          Length = 257

 Score =  180 bits (456), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 62/248 (25%), Positives = 115/248 (46%)

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
              S    +G +   TGE    ++  K  L   + Q +++    +   +L+S   GAVI+
Sbjct: 4   QFASLVRGVGGMGLMTGEVVKGTFTTKFQLREFLEQAWFITSVTMMPAVLVSIPFGAVIS 63

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
            Q      Q GA+ F+     +  +RE   +  A++IAG +GSAI +++GS KI EEIDA
Sbjct: 64  LQVGNLAGQLGAQSFAGATAVLAVVREAAPMAAALIIAGAAGSAICSDMGSRKIREEIDA 123

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  +G+D V  L+ PR+ A +    ++  +   + I G               F S F +
Sbjct: 124 MEVLGIDPVVRLVIPRVLACLFVSVMINGIVIATGIGGGYFFTVIVQGGSAGAFLSSFTA 183

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
            A+L +++  ++K+        I+    G       + +G+ V   V+ +  ++ +++S+
Sbjct: 184 LASLPDLYISMVKSALFGFLAAIIGAYNGLNAQGGPSGVGRAVNEAVIIAFMMLFVLNSI 243

Query: 364 FAIFYFAI 371
               YF I
Sbjct: 244 MTAVYFQI 251


>gi|300784334|ref|YP_003764625.1| ABC transporter permease [Amycolatopsis mediterranei U32]
 gi|299793848|gb|ADJ44223.1| ABC transport system permease protein [Amycolatopsis mediterranei
           U32]
          Length = 283

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 104/260 (40%), Gaps = 10/260 (3%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCA-SSYKFKGFLLSLIRQMYYVGVSG-------- 167
           + +++I         LG  ++   +  A S    + +    +R +  V            
Sbjct: 11  RTLEYIARPGQSLEGLGKQLAFAAKALAWSPRTIRRYSRETLRLLTEVCFGTGGLAVIGG 70

Query: 168 -VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + V+I ++  TG ++  QG   L+Q G    +  + +    RE+  L   + ++   G 
Sbjct: 71  TLGVMIGMTLFTGLIVGLQGYSALNQLGTAALTGFISAYFNTREVAPLSAGLALSATVGC 130

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
              A++G+M+I+EEIDA+  MG+  +  L++ R+ A + ++  L  +   S+ + +  + 
Sbjct: 131 GFTAQLGAMRISEEIDALEVMGVPSMPYLVTTRVLAGVAAVIPLYAVGLLSSYLASRQIT 190

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
              Y      +   F       ++     K    +  + +     GF        +G  V
Sbjct: 191 IWLYGQSAGTYDHYFTLFLPPGDVLWSFGKVIVFSVLVILSHCYYGFNASGGPAGVGVAV 250

Query: 347 TTCVVQSISIVIIIDSLFAI 366
              V  SI ++ ++D   ++
Sbjct: 251 GRAVRTSIVLISVLDFFLSL 270


>gi|300782534|ref|YP_003762825.1| ABC transporter permease [Amycolatopsis mediterranei U32]
 gi|41581798|gb|AAS07742.1| putative ABC-transporter permease [Amycolatopsis mediterranei S699]
 gi|299792048|gb|ADJ42423.1| ABC transport system permease protein [Amycolatopsis mediterranei
           U32]
          Length = 278

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 54/259 (20%), Positives = 106/259 (40%), Gaps = 10/259 (3%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGE-FCASSYKFKGFLLSLIRQMYYVGVSG------- 167
           +   + +N        LG  +S  G     +    + +   ++R +  V           
Sbjct: 5   QGAKRVVNRPLQTLDTLGDQMSFYGRALLWTPRTLRRYTKEVLRLLAEVSFGSGSLAVIG 64

Query: 168 --VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             V V++ ++  TG ++  QG   L+  G   F+  L +    REI  L+  + ++   G
Sbjct: 65  GTVGVMVGLTLFTGVLVGLQGYSALNSIGTSAFTGFLTAFFNTREIAPLVAGLALSATVG 124

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           +   A++G+M+I+EEIDA+  MG+  +  L++ RI A  +++  L I+   S+ + + +V
Sbjct: 125 AGFTAQLGAMRISEEIDALEVMGVPSLPYLVTTRIIAGFVAVIPLYIIGLLSSYLASRLV 184

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
           +   Y      +   F       ++    IK    +  I +     G+        +G  
Sbjct: 185 VIYIYHQSAGTYDHYFDLFLPPQDVLYSFIKVLLFSVLIILSHCYFGYRATGGPAGVGVA 244

Query: 346 VTTCVVQSISIVIIIDSLF 364
           V   V  SI  V I++   
Sbjct: 245 VGKAVRLSIVTVSIMNFFI 263


>gi|119714949|ref|YP_921914.1| hypothetical protein Noca_0702 [Nocardioides sp. JS614]
 gi|119535610|gb|ABL80227.1| protein of unknown function DUF140 [Nocardioides sp. JS614]
          Length = 275

 Score =  179 bits (455), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 52/254 (20%), Positives = 108/254 (42%), Gaps = 6/254 (2%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVPVVI 172
           VK +    S    L   I        +  ++K  +L ++ ++        V    V V++
Sbjct: 9   VKPLKTLDSLGEELAFFIKALAWTPRAIRRYKKEILRILAEVTLGSGALAVIGGTVGVIL 68

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
            ++F TGA +   G   L Q G   F+  + +    REI  L++ + +A   G    A++
Sbjct: 69  AMTFFTGAQVGLSGYAALDQLGTAAFAGFISAYFNTREIAPLVSGIALAATVGCGFTAQL 128

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           GSM+I+EE+DA+  M +  +  L++ RI   +I++  L ++   ++     + + +++  
Sbjct: 129 GSMRISEEVDALEVMAIPSLPFLVTTRIVGGLIAIIPLYVVGLLASYFATRLTVTQFFGQ 188

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
               +   F+S     ++     K    A  + ++    G+        +G  V   V  
Sbjct: 189 SAGTYDHYFNSFLPPGDVLWSFGKVLVFAVTVILIHCYHGYTASGGPAGVGVAVGRAVRT 248

Query: 353 SISIVIIIDSLFAI 366
           SI  + +ID   ++
Sbjct: 249 SIVAINVIDLFLSM 262


>gi|262201122|ref|YP_003272330.1| hypothetical protein Gbro_1129 [Gordonia bronchialis DSM 43247]
 gi|262084469|gb|ACY20437.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247]
          Length = 275

 Score =  179 bits (455), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 53/251 (21%), Positives = 109/251 (43%), Gaps = 7/251 (2%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV-----SGVPVVIL 173
           +K ++ +  Q    G  ++   +     +  +  L  L    +  G        + V++L
Sbjct: 12  LKVLDGAGEQMSFYGRTLAWMPKTLV--HYTREVLRLLAEVAFGSGGLAVIGGTIGVMVL 69

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           +S  TG V+  QG   L Q G++  +  L + +  RE+  L+  + ++   G    A++G
Sbjct: 70  MSGFTGVVVGLQGYAALDQIGSQALTGFLSAYVNTREVAPLVAGLALSATVGCGFTAQLG 129

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           +M+I+EEIDA+ TM +  +  L+S R+ A  +++  L +L   SA + + ++   +    
Sbjct: 130 AMRISEEIDALETMAVPSIPFLVSTRVIAGFVAVIPLYVLGLLSAYLASRVITTVFNGQS 189

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              +   F+     A++     K    A  I +V    G+        +G  V   V  +
Sbjct: 190 GGSYDHYFNLFLPPADVLWSFGKVLVFAFVIILVHCYYGYYASGGPAGVGVAVGHAVRAA 249

Query: 354 ISIVIIIDSLF 364
           + ++ I+D   
Sbjct: 250 LVLIAILDFFL 260


>gi|326333296|ref|ZP_08199543.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1]
 gi|325948940|gb|EGD41033.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1]
          Length = 284

 Score =  179 bits (454), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 51/252 (20%), Positives = 99/252 (39%), Gaps = 2/252 (0%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N         G   +         +         + Q +++        +L++     VI
Sbjct: 32  NALFKALASFGDFYAFVVSVFRKGFTHSFQFREFVSQAWFITTVSFWPALLVAIPFCVVI 91

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
             Q    L + GA   +    ++  +REIG +++ +++AG   +AI A++GS KI EEID
Sbjct: 92  IFQVNQLLIEIGAVDLAGAGAAVAVVREIGPIVSVLVVAGAGATAICADLGSRKIREEID 151

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+ T+G+D +  L+ PR+ A  +    L  L     ++G              ++ +   
Sbjct: 152 AMTTLGIDPIHRLVVPRVAASTLVGIALNGLVTVVGLVGGYFFSVVLQGATPGLYLNDLT 211

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L++      KA       G+ A   G         +G+ V   VV +  ++   +S
Sbjct: 212 LLVGLSDFIAAEAKAAIFGLLAGLTACYLGLNAKGGPKGVGEAVNQTVVFAFMLLFAANS 271

Query: 363 LFAIFY--FAIG 372
           + +  +  F +G
Sbjct: 272 VISTLFLQFKLG 283


>gi|168699832|ref|ZP_02732109.1| probable permease of ABC transporter [Gemmata obscuriglobus UQM
           2246]
          Length = 276

 Score =  179 bits (454), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 69/236 (29%), Positives = 115/236 (48%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
            G          A  +         +R    VG + V VV +     G V+A Q   Q  
Sbjct: 24  FGDWWLFAFRSLAGIFGRAFRAGEFLRVAVEVGTNSVGVVAITGTFIGMVLAVQAYGQFH 83

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
             G E     ++ I  +RE+G +L AVM+AGR GSA+ AE+ +M++ E++DA+  +G+D 
Sbjct: 84  TIGMETSLGAVIHISVVRELGPVLAAVMLAGRVGSAMAAELATMRVTEQLDALACLGVDP 143

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V+ L+ PR+ A  + LPLLT+LA+   + G+S++    Y I    ++        L ++ 
Sbjct: 144 VKYLVGPRLLACFLLLPLLTVLADVMGLFGSSLICLHVYHIDSHHYWRHTREFVKLWDVS 203

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            GL+KA      + ++A   GF     +  +G+  T   V +   ++IID L A+ 
Sbjct: 204 VGLMKAFVFGAVLSLIACHRGFNSKAGAAGVGRAATEAFVIAFVAILIIDFLLAML 259


>gi|312141009|ref|YP_004008345.1| integral membrane protein yrbe4b [Rhodococcus equi 103S]
 gi|325675354|ref|ZP_08155038.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Rhodococcus equi ATCC 33707]
 gi|311890348|emb|CBH49666.1| putative integral membrane protein YrbE4B [Rhodococcus equi 103S]
 gi|325553325|gb|EGD23003.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Rhodococcus equi ATCC 33707]
          Length = 286

 Score =  179 bits (454), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 51/257 (19%), Positives = 115/257 (44%), Gaps = 9/257 (3%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVP 169
           +K +  ++++  Q       I+ T        +++  +L L+ ++ +      V    + 
Sbjct: 20  RKPLDVLDNAGEQMSFYSRAIAWTPRTLR---RYRKEMLRLLAEVTFGSGALAVIGGTIG 76

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V++++S  TG V+  QG   L Q G+ + +  L + +  REI  ++ A+ ++   G    
Sbjct: 77  VIVMMSGFTGVVVGLQGFAALDQLGSSVLTGFLSAYVNTREIAPIVAALALSATVGCGFT 136

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A++G+M+I+EEIDA+  M +  V  L++ R+ A  +++  L I+   +A + + +V   +
Sbjct: 137 AQLGAMRISEEIDALEVMAVPSVPFLVTTRMIAGFVAVIPLYIVGLLAAYLASRVVSTVF 196

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
                  +   F+      ++     K    A  + ++    GF        +G  V   
Sbjct: 197 NGQSSGSYDHYFNLFLPPEDVLWSFGKVLVFAFVLILIHCYYGFHARGGPAGVGVAVGHA 256

Query: 350 VVQSISIVIIIDSLFAI 366
           V  +I  + ++D   ++
Sbjct: 257 VRTAIVTIAVLDFFLSL 273


>gi|315442585|ref|YP_004075464.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|315260888|gb|ADT97629.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 237

 Score =  178 bits (453), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 49/234 (20%), Positives = 96/234 (41%), Gaps = 4/234 (1%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
           + +    +     ++F+ FL     Q + +    +   +L++     ++A      L + 
Sbjct: 1   MSLDTFVKTFRRPFQFREFL----EQTWMIARVSLVPTLLVAIPFTVLVAFTLNILLREI 56

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           GA   S    +   + ++G ++T +++AG   +AI A++G+  I EEIDA+R +G+D ++
Sbjct: 57  GAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQ 116

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            L+ PR+ A      LL  L     + G  +       +    F +       L  +   
Sbjct: 117 RLVVPRVLASTFVALLLNGLVCLIGLSGGYVFSVFLQGVNPGSFINGLTVLTGLPELILA 176

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            IKA       G+V    G  V      +G  V   VV +   + +I+ +    
Sbjct: 177 EIKALLFGFVAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVIMTAI 230


>gi|296139954|ref|YP_003647197.1| hypothetical protein Tpau_2249 [Tsukamurella paurometabola DSM
           20162]
 gi|296028088|gb|ADG78858.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM
           20162]
          Length = 279

 Score =  178 bits (453), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 52/268 (19%), Positives = 111/268 (41%), Gaps = 9/268 (3%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY-- 162
            SF +         +K ++ +  Q    G  I    +  A   ++   +  ++ ++ +  
Sbjct: 3   RSFTDKARKAAGAPLKVLDGAGEQMSFYGRSIGFIPQSIA---RYPKEVGRVLAEVAFGS 59

Query: 163 ----VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
               V    V VV+++   TG V+  QG   L Q GA + +  L + +  RE+  L+ A+
Sbjct: 60  GALAVIAGTVGVVLMLCGFTGIVVGLQGNAALQQLGASVMTGFLSAYVNTRELTPLVAAL 119

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
            ++   G    A++G+M+I+EEIDA+  M +  +  L + R+ A  +++  L I+   ++
Sbjct: 120 AMSATVGCGFTAQLGAMRISEEIDALEAMAIPSISFLTATRVIAGFVAVIPLYIVGLLAS 179

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
            +    V           +   F+   +  ++     K    A  + +V    G+     
Sbjct: 180 YVMTRFVNTTLLGQSTGTYDHYFNLFLSPDDVLWSFGKVLVFAFVLVLVHCYYGYNASGG 239

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAI 366
              +G  V   V  S+  + ++D   ++
Sbjct: 240 PAGVGVAVGRAVRTSLVAIALLDFFLSL 267


>gi|257054989|ref|YP_003132821.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Saccharomonospora viridis
           DSM 43017]
 gi|256584861|gb|ACU95994.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Saccharomonospora viridis
           DSM 43017]
          Length = 281

 Score =  178 bits (453), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 105/263 (39%), Gaps = 10/263 (3%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVSG----- 167
           + +++   ++   S    LG  +  +    A      + +   ++R +  V         
Sbjct: 6   VRQRVAHTLDRRLSFLDTLGESVLFSLRALAWIPRALRRYPREIVRLLAEVSFGSGALAV 65

Query: 168 ----VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
               + V++ ++  TG V+  QG   L Q G   F+  + +    REI  L+  + ++  
Sbjct: 66  IGGTIGVMVGMTMFTGIVVGLQGYTALDQVGTAAFAGFISAYFNTREIAPLVAGLALSAT 125

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
            G    A++GSM+I+EEIDA+  MG+  V  L++ R+ A   ++  L  +   ++ + + 
Sbjct: 126 VGCGFTAQLGSMRISEEIDALEVMGVPSVPYLVTTRVIAGFCAIIPLYAIGLLTSYVASR 185

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
            +   +Y      +   F       ++     K    +  + +     GF        +G
Sbjct: 186 QITVWFYGQSEGTYDHYFELFLPPEDVLWSFGKVLLFSVVVVMTHCYYGFRASGGPAGVG 245

Query: 344 KKVTTCVVQSISIVIIIDSLFAI 366
             V   V  +I  V ++D   ++
Sbjct: 246 VAVGRAVRTAIVAVALLDFFASL 268


>gi|256380616|ref|YP_003104276.1| hypothetical protein Amir_6633 [Actinosynnema mirum DSM 43827]
 gi|255924919|gb|ACU40430.1| protein of unknown function DUF140 [Actinosynnema mirum DSM 43827]
          Length = 279

 Score =  178 bits (453), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 103/261 (39%), Gaps = 6/261 (2%)

Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGV 165
               +     +    S    L   +        +  ++   +L L+ ++ +      V  
Sbjct: 6   ERARRAASAPLRGLDSLGDQLWFYLRALAWAPRAITRYHREVLRLLAEVSFGSGALAVIG 65

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             + V++ +S  TG V+  QG   L Q G   F+  + +    REI  L+  + ++   G
Sbjct: 66  GTIGVMVGLSVFTGTVVGLQGFTALDQIGTSAFAGFVSAYFNTREIAPLVAGLALSATVG 125

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           S   A++G+M+I+EEIDA+  MG+  +  L++ RI A   ++  L ++   ++ + A  V
Sbjct: 126 SGFTAQLGAMRISEEIDALEVMGVPSLPYLVTTRIVAGFAAIVPLYVIGLLTSYLAARTV 185

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
              +Y      +   F       ++     K    A  I +     G+        +G  
Sbjct: 186 TVHFYGQSAGTYDHYFTLFLPPEDVLWSFGKVLVFAVVIILTHCYYGYRASGGPAGVGVA 245

Query: 346 VTTCVVQSISIVIIIDSLFAI 366
           V   V  +I    ++D   ++
Sbjct: 246 VGRAVRTAIVTTSLLDFFLSL 266


>gi|291004489|ref|ZP_06562462.1| putative ABC transport system permease protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 279

 Score =  178 bits (453), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 109/254 (42%), Gaps = 9/254 (3%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVI 172
           ++F++D   Q       +        +  ++    + L+ ++ +      V    V V++
Sbjct: 16  LEFLDDLGDQMSF---YLRTLAWIPKAVTRYVKETMRLLAEVSFGSGALAVIGGTVGVMV 72

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
            ++  TG V+  QG   L+Q G   F+  + +    REI  L+  + ++   GS   A++
Sbjct: 73  GMTLFTGTVVGLQGYAALNQIGTSAFAGFVSAYFNTREIAPLVAGLALSATVGSGFTAQL 132

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           G+M+I++EIDA+ TMG+  +  L++ R+ A  +++  L +L   ++ + A +V    Y  
Sbjct: 133 GAMRISDEIDALETMGVPSLPYLVTTRVVAGFVAVVPLYVLGLLTSYLAARLVTVHVYGQ 192

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
               +   F+      ++     K    +  + +     G+        +G  V   V  
Sbjct: 193 SAGTYDHYFNLFLPPEDVLWSFGKVLVFSVVVIMTHCYYGYRASGGPAGVGVAVGRAVRT 252

Query: 353 SISIVIIIDSLFAI 366
           +I    ++D   ++
Sbjct: 253 AIVTTALLDFFLSL 266


>gi|119717049|ref|YP_924014.1| hypothetical protein Noca_2825 [Nocardioides sp. JS614]
 gi|119537710|gb|ABL82327.1| protein of unknown function DUF140 [Nocardioides sp. JS614]
          Length = 279

 Score =  178 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 106/264 (40%), Gaps = 11/264 (4%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG--- 167
              +G    +   DS  Q      ++        +    + +   ++  +  V       
Sbjct: 4   ISALGGSFYRGRRDSLEQYGD--QLLFYVKALSWTPRAIRRYPREIVNTLAEVTFGAGGL 61

Query: 168 ------VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221
                 V V+  ++F  G  +  QG   LSQ G   FS  + +    RE+  L++A+ +A
Sbjct: 62  SLIAGTVGVIAFLAFFAGTEVGIQGYASLSQIGVAKFSAFISAYFNTREVAPLVSAIALA 121

Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281
              G    A +G+M+I+EEIDA+  MG+  +  L++ R+ A  +++  L ++A  ++ + 
Sbjct: 122 ATVGCGYTARLGAMRISEEIDALEVMGIPSLPFLVTTRMVAAFVAVIPLYVVALSASYLS 181

Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341
             ++    Y      +   F       ++     K  F+A A+ ++    G+        
Sbjct: 182 PRLITTLVYGQSPGTYDHYFLQFLPPIDMLWSFFKLLFLAAAVILIHCYYGYTASGGPAG 241

Query: 342 LGKKVTTCVVQSISIVIIIDSLFA 365
           +G  V   +  SI  +++ D   +
Sbjct: 242 VGMAVGRAIRTSIVTIVVADFFLS 265


>gi|149921451|ref|ZP_01909903.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Plesiocystis pacifica
           SIR-1]
 gi|149817654|gb|EDM77121.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Plesiocystis pacifica
           SIR-1]
          Length = 251

 Score =  178 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 61/249 (24%), Positives = 112/249 (44%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G ++    +   +++    +L   +  M  +    +  V L     GAVI+ 
Sbjct: 3   LLRMLQTIGGLVVFMAQVARATFSRPFYLRQTLDIMAILVQRCIVPVGLAVAPVGAVISL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG      FGAE      +    +RE    L +VM+A ++GS+I A IG+MK+  +IDA+
Sbjct: 63  QGIAVFKLFGAERMLSAFLGTAIIREYSPALASVMVAAQAGSSIAARIGTMKVRGQIDAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D VR ++ P + A ++  PLL+++ N   I+   I       +    F     + 
Sbjct: 123 AVMSVDPVRYVVVPGVLACVLVTPLLSVVTNLLGILSGWIFAVPLGGVDHGAFMDNLTAQ 182

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            T  +++ GL K       +G++A   G  VG  +  +GK     VV +I +++  D + 
Sbjct: 183 ITPMDLWVGLGKCAVFGLGVGMIAGYLGLNVGRGAADVGKAANDTVVSTIVLILFTDYVV 242

Query: 365 AIFYFAIGI 373
           ++     G+
Sbjct: 243 SMALLGAGL 251


>gi|84494809|ref|ZP_00993928.1| putative ABC transporter integral membrane protein [Janibacter sp.
           HTCC2649]
 gi|84384302|gb|EAQ00182.1| putative ABC transporter integral membrane protein [Janibacter sp.
           HTCC2649]
          Length = 203

 Score =  178 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 60/198 (30%), Positives = 99/198 (50%)

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           +S   GAVIA Q      Q GA+ F+     +  +RE   ++TA++IAG  GSAI A++G
Sbjct: 1   MSIPFGAVIALQLGTLTRQLGAQSFTGAASVLAVVREASPIVTALLIAGAGGSAICADLG 60

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           S KI EE+DA+  +G+  ++ L+ PR+ A ++   LL  L +   + G            
Sbjct: 61  SRKIREELDAMEVLGISPIQRLVVPRVLATMLVAVLLNGLVSVVGVGGGYFFNVVIQGGT 120

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              + + F + A LA+++T  IKA        IVA  +G   G     +G  V   VV +
Sbjct: 121 PGAYLASFTALAQLADLWTSEIKALLFGAVAAIVASYKGLTAGGGPKGVGDAVNQSVVIT 180

Query: 354 ISIVIIIDSLFAIFYFAI 371
             ++ +I+ + +  YF +
Sbjct: 181 FMLLFVINFVISAIYFQV 198


>gi|313204340|ref|YP_004042997.1| hypothetical protein Palpr_1873 [Paludibacter propionicigenes WB4]
 gi|312443656|gb|ADQ80012.1| protein of unknown function DUF140 [Paludibacter propionicigenes
           WB4]
          Length = 246

 Score =  178 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 58/246 (23%), Positives = 106/246 (43%), Gaps = 1/246 (0%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            S  +  G  +       A   ++K F     +++  +G+  +P+V +IS   G ++  Q
Sbjct: 1   MSLLNNTGKYVLLMKRVFAKPDRWKMFFRQFPKELEKLGLQSLPIVAIISIFIGFIMTMQ 60

Query: 186 GAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                +     +++  L++    L E    +  +++AG+ GS I +EIG+M+I E+IDA+
Sbjct: 61  TKLNTANPLLPVYTTGLVTRDTLLLEFSSTILCLILAGKVGSNIASEIGTMRITEQIDAL 120

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG++    LI P+I A II +P L + +    I G   V      +    + +     
Sbjct: 121 EIMGVNSANYLILPKIAAFIIMMPFLVVFSMALGIFGGYFVGVLTSIMTTGDYLTGIQYA 180

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
                +F  LIK+   A  I  VA   G+     +  +GK  T  VV    +++  + L 
Sbjct: 181 FVPFYVFYSLIKSMIFAFIISSVAAYYGYYAYGGALDVGKASTNAVVNGSVLILFFNILI 240

Query: 365 AIFYFA 370
                 
Sbjct: 241 TKIMLN 246


>gi|257054990|ref|YP_003132822.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Saccharomonospora viridis
           DSM 43017]
 gi|256584862|gb|ACU95995.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Saccharomonospora viridis
           DSM 43017]
          Length = 267

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 50/223 (22%), Positives = 96/223 (43%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +     G + +   E      +        ++Q +++    +    L++   G VIA   
Sbjct: 17  AAIRQAGKLYALALEVLRCIPRRPFQFREFVQQFWFIASVSILPTALVAIPFGGVIALHV 76

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
               +Q GA+ F+     +  +++   ++TA++IAG  GSA+ A++GS  I EEIDA++ 
Sbjct: 77  GSLTTQIGAQSFTGAASVLAIIQQASPIVTALLIAGAGGSAMCADLGSRTIREEIDALKV 136

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +G+  ++ L+ PR+ A +     L  + +   + G         D     + + F + A 
Sbjct: 137 LGVSPIQRLVVPRVLAAMAVAVFLNGMVSVVGVCGGYFFNVIMQDGTPGAYLASFSALAQ 196

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
           L +++ G IKA       G+VA   G         +G  V   
Sbjct: 197 LPDLWIGEIKALVFGFVAGVVAAHRGLNPSAGPKGVGDAVNQS 239


>gi|145220618|ref|YP_001131296.1| hypothetical protein Mflv_0012 [Mycobacterium gilvum PYR-GCK]
 gi|145213104|gb|ABP42508.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
          Length = 312

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 55/233 (23%), Positives = 106/233 (45%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +     F    +  +      +RQ  ++  + V   +L++   G  ++ Q A    Q GA
Sbjct: 71  VRTLQWFFVDLFTGRFQFQEFVRQGAFMAGTAVLPTVLVALPIGVTLSIQFALLAGQVGA 130

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
              +     +  +R+   L  A+++A   GSAI A++GS K+ EE DA+  MG+  +R L
Sbjct: 131 TSLAGAASGLAVIRQAASLTAAILMAAAVGSAITADLGSRKMREETDAMEVMGVSVIRRL 190

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PR  A I+    LT +  F   + + +    + +     F + F S AT  ++   L+
Sbjct: 191 VVPRFAAAIMIGVALTGVVCFVGFLASYLFNVYFQNGAPGSFVATFASFATTGDMIVALV 250

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           KA      + IV+ ++G +       +   V   VV+SI ++++++   +  Y
Sbjct: 251 KAVIFGAIVAIVSCQKGLSTQGGPTGVANSVNAAVVESILVLMVVNVAISQLY 303


>gi|226361064|ref|YP_002778842.1| YrbE family protein [Rhodococcus opacus B4]
 gi|226239549|dbj|BAH49897.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 286

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 113/261 (43%), Gaps = 9/261 (3%)

Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGV 165
             +G+  +  ++ +  Q       I+ +         ++  +L L+ ++ +      V  
Sbjct: 16  RRVGRAPLNVLDRAGEQMSFYARAIAWSPHTLVH---YRKEVLRLLAEVTFGSGALAVIG 72

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             + V+ ++S  TG V+  QG   L Q G+ + +  L + +  REI  ++ A+ ++   G
Sbjct: 73  GTIGVIAMMSGFTGVVVGLQGFAALEQLGSSVLTGFLSAYVNTREIAPIVAALALSATVG 132

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
               A++G+M+I+EEIDA+  M +  V  L++ R+ A  +++  L I+   +A + + ++
Sbjct: 133 CGFTAQLGAMRISEEIDALEVMAVPSVPFLVTTRMIAGFVAVIPLYIVGLLAAYLASRVI 192

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
              +       +   F+      ++     K    A  + ++    G+        +G  
Sbjct: 193 STVFNGQSTGSYDHYFNLFLPPQDVLYSFAKVLIFAFVLILIHCYYGYHASGGPAGVGVA 252

Query: 346 VTTCVVQSISIVIIIDSLFAI 366
           V   V  +I  + ++D   ++
Sbjct: 253 VGRAVRTAIVTIAVLDFFLSL 273


>gi|311744834|ref|ZP_07718630.1| ABC superfamily ATP binding cassette transporter permease protein
           [Aeromicrobium marinum DSM 15272]
 gi|311311951|gb|EFQ81872.1| ABC superfamily ATP binding cassette transporter permease protein
           [Aeromicrobium marinum DSM 15272]
          Length = 258

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 4/247 (1%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           + +   +   ++          ++ + FLL    Q Y+     +    L++   GAVIA 
Sbjct: 10  ARAAGGLFAFMLDVFMALFKRPFQMREFLL----QAYFTIRVTIVPTALVAIPFGAVIAL 65

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q    + QFGA+ F+     +  +R  G + TA++IAG +GSAI A+ G+ KI EE+DA+
Sbjct: 66  QVGGLIKQFGAQSFTGSAAVLAVVRNAGPIATALLIAGAAGSAIAADFGARKIREELDAM 125

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             +G+D ++ L+ PR+ A+++    L  L  F  + G  +      D     + + F + 
Sbjct: 126 MVLGIDPIQRLVVPRVLAVMLIAVFLNGLVTFVGVAGGYVFNVLLQDGTPGAYLASFTAL 185

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A L +I  G++KA        IVA  +G         +G  V   VV +  ++  ++ + 
Sbjct: 186 AQLPDILQGMVKAVIFGFLAAIVASYKGMNAKGGPKGVGDAVNEAVVITFVLLFAVNFVV 245

Query: 365 AIFYFAI 371
           +  Y  +
Sbjct: 246 SALYIQL 252


>gi|124005927|ref|ZP_01690765.1| domain of unknown function superfamily [Microscilla marina ATCC
           23134]
 gi|123988610|gb|EAY28251.1| domain of unknown function superfamily [Microscilla marina ATCC
           23134]
          Length = 248

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 59/244 (24%), Positives = 112/244 (45%), Gaps = 1/244 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG           +  +FK ++   I +   +G+  V +V++ S   GAV A Q A+
Sbjct: 1   MQTLGKYCIFIASLFYNRERFKVYVRLTIDECMRIGIDSVFIVVITSTFIGAVAAVQTAY 60

Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            L      ++    ++  + + E    +T +++AG+ GS I   +G+M+I E++DAI  M
Sbjct: 61  NLVSPAIPLYVIGTIVRDMAILEFAPTITCIVLAGKVGSNIAGGLGTMRITEQVDAIEVM 120

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    L+ P+I A +I++P+L ++A F +I+G  I       +  + +          
Sbjct: 121 GINAASYLVLPKITAALITIPMLCVIAGFLSIMGGFISGTVTGALTESQYIYGIRWDFNP 180

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             I+  +IK+   A  I  ++  +GF     +  +G+  T  V  S   V+  D + A  
Sbjct: 181 GGIYFAIIKSFVFAYLISSISAFKGFFTTGGALEVGQSSTNAVTSSTIAVLFADYILAQL 240

Query: 368 YFAI 371
              I
Sbjct: 241 LAGI 244


>gi|254797049|ref|YP_003081887.1| ABC transporter permease protein [Neorickettsia risticii str.
           Illinois]
 gi|254590296|gb|ACT69658.1| ABC transporter permease protein [Neorickettsia risticii str.
           Illinois]
          Length = 250

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 60/249 (24%), Positives = 119/249 (47%), Gaps = 2/249 (0%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
             N   +   ILG           S  K   + L +I+Q++ +G   +P+V   +   GA
Sbjct: 1   MYNHIKNTIKILGDFTLFNLNIFLSGRKM--YFLEIIKQLFLIGYYSMPIVAFSAVFMGA 58

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           ++A      L  F ++     +++    REIG ++  +++AGR  S I AEIG+M++ E+
Sbjct: 59  MLALHTYTGLDLFQSQTMVAQILAKSITREIGPVVVGIVVAGRVASTIAAEIGTMRVTEQ 118

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +D +R++ ++    L+ P+I A +IS P+L I++    ++G  ++    +     ++ S 
Sbjct: 119 VDLLRSLSINVHAYLVLPKIIAALISFPVLEIISALFGMLGGYLIGTYKFAFSKMLYISD 178

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             +  T A++ +G+ KA F       V+          +  +G  VT  VV S  ++++ 
Sbjct: 179 TLTFITYADLMSGMTKAFFFGFITASVSCFNALRATHGAKGVGIAVTNSVVASFVLILLS 238

Query: 361 DSLFAIFYF 369
           + L  +  F
Sbjct: 239 NYLITLAIF 247


>gi|111018969|ref|YP_701941.1| hypothetical protein RHA1_ro01972 [Rhodococcus jostii RHA1]
 gi|110818499|gb|ABG93783.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
          Length = 274

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 113/261 (43%), Gaps = 9/261 (3%)

Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGV 165
             +G+  +  ++ +  Q       I+ +         ++  +L L+ ++ +      V  
Sbjct: 4   RRVGRAPLNVLDRAGEQMSFYARAIAWSPHTLVH---YRKEVLRLLAEVTFGSGALAVIG 60

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             + V+ ++S  TG V+  QG   L Q G+ + +  L + +  REI  ++ A+ ++   G
Sbjct: 61  GTIGVIAMMSGFTGVVVGLQGFAALEQLGSSVLTGFLSAYVNTREIAPIVAALALSATVG 120

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
               A++G+M+I+EEIDA+  M +  V  L++ R+ A  +++  L I+   +A + + I+
Sbjct: 121 CGFTAQLGAMRISEEIDALEVMAVPSVPFLVTTRMIAGFVAVIPLYIVGLLAAYLASRII 180

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
              +       +   F+      ++     K    A  + ++    G+        +G  
Sbjct: 181 STVFNGQSTGSYDHYFNLFLPPQDVLYSFAKVLVFAFVLILIHCYYGYHASGGPAGVGVA 240

Query: 346 VTTCVVQSISIVIIIDSLFAI 366
           V   V  +I  + ++D   ++
Sbjct: 241 VGRAVRTAIVTIAVLDFFLSL 261


>gi|145222146|ref|YP_001132824.1| hypothetical protein Mflv_1554 [Mycobacterium gilvum PYR-GCK]
 gi|145214632|gb|ABP44036.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
          Length = 237

 Score =  177 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 49/234 (20%), Positives = 96/234 (41%), Gaps = 4/234 (1%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
           + +    +     ++F+ FL     Q + +    +   +L++     ++A      L + 
Sbjct: 1   MSLDTFVKTFRRPFQFREFL----EQTWMIARVSLVPTLLVAIPFTVLVAFTLNILLREI 56

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           GA   S    +   + ++G ++T +++AG   +AI A++G+  I EEIDA+R +G+D ++
Sbjct: 57  GAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQ 116

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            L+ PR+ A      LL  L     + G  +       +    F +       L  +   
Sbjct: 117 RLVVPRVLASTFVALLLNGLVCLIGLSGGYVFSVFLQGVNPGSFINGLTVLTGLPELILA 176

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            IKA       G+V    G  V      +G  V   VV +   + +I+ +    
Sbjct: 177 EIKALLFGVVAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVIMTAI 230


>gi|190343261|gb|ACE75649.1| ABC transporter permease protein [Candidatus Nitrospira defluvii]
          Length = 259

 Score =  177 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 62/257 (24%), Positives = 122/257 (47%), Gaps = 2/257 (0%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   +G+K +       + A +    + +      +       L  L+RQ+ + GV  +P
Sbjct: 1   MIEWVGRKAIAGYTYLAALATLFTQAVLDL--LLPTRQGRGETLRVLVRQILFTGVDALP 58

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V  +I+ + G +I  Q   QL + GA      ++ +  +RE+G L+TA ++ GRSG+AI 
Sbjct: 59  VTTVIALLLGIIIVTQAGTQLPRLGAGGLVGSIIVVTVIRELGPLITAFIVVGRSGTAIA 118

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
            E+G+M +  E+ A+R MG+   R +I PR+  +++S+  LT+  +  A++G  ++    
Sbjct: 119 TELGNMSVTREVVALRLMGISISRFVIMPRMVGMVLSMLCLTLYFDVVAVLGGYLIADAQ 178

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
             IPF  F        +  ++    IK      A+  +    G AV      + ++ T  
Sbjct: 179 LTIPFYAFVESITKALSTTDVLMTAIKGLSFGSAVAAICCYHGLAVRSSFTEVPQQTTRA 238

Query: 350 VVQSISIVIIIDSLFAI 366
           ++ S  + ++ID +  +
Sbjct: 239 MINSFVLCLLIDVVVTV 255


>gi|240170056|ref|ZP_04748715.1| membrane protein YrbE4A [Mycobacterium kansasii ATCC 12478]
          Length = 254

 Score =  177 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 98/243 (40%), Gaps = 4/243 (1%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           + +      + I          ++F+ FL     Q + V    +   +L+S     ++A 
Sbjct: 9   ARAVGGFFEMSIDTGRAALRRPFQFREFL----DQTWMVARVSLVPTLLVSIPFTVLVAF 64

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                L + GA   S    +   + ++G ++T +++AG   +AI A++G+  I EEIDA+
Sbjct: 65  TLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAM 124

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R +G+D ++ L+ PR+ A  +   LL  L     + G  +       +    F +     
Sbjct: 125 RVLGIDPIQRLVVPRVLASTLVALLLNGLVCAIGLSGGYVFSVFLQGVNPGAFINGLTVL 184

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L  +    +KA       G+V    G  V      +G  V   VV +   + +I+ + 
Sbjct: 185 TGLRELILAEVKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVM 244

Query: 365 AIF 367
              
Sbjct: 245 TAI 247


>gi|88608548|ref|YP_506573.1| putative ABC transporter, permease protein [Neorickettsia sennetsu
           str. Miyayama]
 gi|88600717|gb|ABD46185.1| putative ABC transporter, permease protein [Neorickettsia sennetsu
           str. Miyayama]
          Length = 250

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 56/249 (22%), Positives = 116/249 (46%), Gaps = 2/249 (0%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
             N   +   I G     +     S    K +   +I+Q++ +G   +P+V   +   GA
Sbjct: 1   MYNHIKNTIKIFGDFTLFSLSTFLSGR--KIYFSEIIKQLFLIGYYSMPIVAFSAVFIGA 58

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           ++A      L  F ++     +++    REIG ++  +++AGR  S I AEIG+M++ E+
Sbjct: 59  MLAFHTYTGLDLFQSQTMVAQILAKSITREIGPVVVGIVVAGRVASTIAAEIGTMRVTEQ 118

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +D +R++ ++    L+ P+I A +IS P+L I++    ++G  ++    +     ++ S 
Sbjct: 119 VDLLRSLSINVHAYLVLPKIIAALISFPVLEIVSTLFGMLGGYLIGTYKFAFSKMLYVSD 178

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             +  T  ++  G+ K+ F       V+          +  +G  VT  VV S  ++++ 
Sbjct: 179 TLTFLTSKDLIAGMTKSFFFGFITASVSCFNALRATHGAKGVGIAVTNSVVASFVLILLS 238

Query: 361 DSLFAIFYF 369
           + L  +  F
Sbjct: 239 NYLITLAIF 247


>gi|300775379|ref|ZP_07085241.1| ABC superfamily ATP binding cassette transporter permease protein
           [Chryseobacterium gleum ATCC 35910]
 gi|300506119|gb|EFK37255.1| ABC superfamily ATP binding cassette transporter permease protein
           [Chryseobacterium gleum ATCC 35910]
          Length = 250

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 3/246 (1%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G  I   G+      K + F    +R++  +GV+   +V+  S   GAV+A 
Sbjct: 2   LKKFFTAVGEYIILLGKSLQKPQKMRVFWKLFMREINDLGVNSFGLVVFTSIFVGAVVAI 61

Query: 185 QGAFQLSQ---FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           Q               F       + + E    + ++++AG+ GS I + IG+M+++E+I
Sbjct: 62  QMFNNFDASSFPIPTSFVGYATKAVLVLEFSPTIISLILAGKVGSYIASSIGTMRVSEQI 121

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  MG++    LI P+I A ++  PLL  ++    I G  I      +     +    
Sbjct: 122 DALDIMGVNSPNFLIFPKIVACVLFNPLLIAISIVFGIGGGYIAGILTGNWTENDYIVGI 181

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                   I+   IK    A  I  V    G+ V   S  +G+  T  VV ++  +II +
Sbjct: 182 QMYMPNLFIYYAFIKTTVFAFIIATVPSYFGYNVKGGSLEVGRASTQAVVWTMVFIIISE 241

Query: 362 SLFAIF 367
            +    
Sbjct: 242 LILTQL 247


>gi|225010488|ref|ZP_03700959.1| protein of unknown function DUF140 [Flavobacteria bacterium
           MS024-3C]
 gi|225005317|gb|EEG43268.1| protein of unknown function DUF140 [Flavobacteria bacterium
           MS024-3C]
          Length = 245

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 54/244 (22%), Positives = 100/244 (40%), Gaps = 2/244 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
           Q   +G       E      ++K     +++++  +    + +VI +SF  G V+  Q A
Sbjct: 3   QLAAIGQYFLMIREVFKKPTRWKVMRGLILKEIDELIYGSMGIVIFVSFFIGGVVTIQTA 62

Query: 188 FQLSQFGAE-IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
             L+                 + E     T++++AG+ GS I + IGSM++ E+IDA+  
Sbjct: 63  LNLNSPLIPKNLIGFAARQSVILEFAPTFTSIIMAGKVGSFITSSIGSMRVTEQIDALEV 122

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG++ +  L+ P+I AL +  P +  +A +  I G  +          A F         
Sbjct: 123 MGINSLNYLVFPKIIAL-LMYPFVIAIAMYLGIFGGFLAGVFGGFSTAADFIEGVRIDFV 181

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
             ++    IK  F A  I  V    G+ +   +  +GK  TT  V +  ++I  + +   
Sbjct: 182 PFHVAYAFIKTMFFAFIIATVPSFHGYYMKGGALEVGKASTTSFVWTAVVIITTNYILTQ 241

Query: 367 FYFA 370
               
Sbjct: 242 LLLG 245


>gi|118470037|ref|YP_890128.1| hypothetical protein MSMEG_5902 [Mycobacterium smegmatis str. MC2
           155]
 gi|118171324|gb|ABK72220.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
           155]
          Length = 254

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 51/247 (20%), Positives = 99/247 (40%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
            I      A  +G  +  + +  A  ++    L   + Q + +    +   +L++     
Sbjct: 1   MIEQLAVPARAVGGFVEMSLDTFAKIFRRPFQLKEFLDQTWMIARVSLVPTLLVAIPFTV 60

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           ++A      L + GA   S    +   + ++G ++T +++AG   +AI A++G+  I EE
Sbjct: 61  LVAFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREE 120

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+R +G+D ++ L+ PR+ A      LL  L     + G  +       +    F + 
Sbjct: 121 IDAMRVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGLAGGYVFSVFLQGVNPGAFING 180

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                 L  +    IKA       G+V    G  V      +G  V   VV +   + +I
Sbjct: 181 LTVLTGLGELVLAEIKALLFGVVAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVI 240

Query: 361 DSLFAIF 367
           + +    
Sbjct: 241 NVIMTAV 247


>gi|89891419|ref|ZP_01202925.1| putative ABC transporter [Flavobacteria bacterium BBFL7]
 gi|89516450|gb|EAS19111.1| putative ABC transporter [Flavobacteria bacterium BBFL7]
          Length = 246

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 49/243 (20%), Positives = 93/243 (38%), Gaps = 2/243 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +G  I           K       +++++  + +  + +   IS   GAV+A Q A
Sbjct: 3   FLRHIGKYILMLIGIFKRPTKTSVLRELILKEIDDLVIGSIGITAFISLFMGAVVALQTA 62

Query: 188 FQLSQFGAE-IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
             L                  + E      +V++AG+ GS I + IG+M++ E+IDA+  
Sbjct: 63  LNLDNPLIPKSLIGFATRQSIILEFAPTFISVIMAGKVGSYITSSIGTMRVTEQIDALEV 122

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG++ +  LI P+I AL+   P L  +  F  I G  +       +    F      +  
Sbjct: 123 MGINPLNYLIYPKIIALLF-YPFLIAIIMFVGIFGGFLASVYGNLVSLEDFIVGLQDSFI 181

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
             ++    IK       +  +    G+ +   +  +GK  TT  V +   +I+ + +   
Sbjct: 182 PWHVAYAFIKTMVFGILLATIPSYHGYYMEGGALEVGKASTTSFVWTCVAIIVANYILTQ 241

Query: 367 FYF 369
              
Sbjct: 242 ILL 244


>gi|15610637|ref|NP_218018.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis H37Rv]
 gi|31794677|ref|NP_857170.1| integral membrane protein YrbE4a [Mycobacterium bovis AF2122/97]
 gi|121639420|ref|YP_979644.1| integral membrane protein YrbE4a [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148663365|ref|YP_001284888.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis H37Ra]
 gi|148824708|ref|YP_001289462.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis F11]
 gi|167967132|ref|ZP_02549409.1| conserved membrane protein YrbE4A [Mycobacterium tuberculosis
           H37Ra]
 gi|215405542|ref|ZP_03417723.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           02_1987]
 gi|215413414|ref|ZP_03422098.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           94_M4241A]
 gi|215429007|ref|ZP_03426926.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis T92]
 gi|215432469|ref|ZP_03430388.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           EAS054]
 gi|215447834|ref|ZP_03434586.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis T85]
 gi|218755278|ref|ZP_03534074.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis GM
           1503]
 gi|219559568|ref|ZP_03538644.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis T17]
 gi|224991916|ref|YP_002646605.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253800543|ref|YP_003033544.1| hypothetical protein TBMG_03546 [Mycobacterium tuberculosis KZN
           1435]
 gi|254234087|ref|ZP_04927412.1| hypothetical integral membrane protein yrbE4A [Mycobacterium
           tuberculosis C]
 gi|254366847|ref|ZP_04982888.1| hypothetical integral membrane protein yrbE4A [Mycobacterium
           tuberculosis str. Haarlem]
 gi|254552603|ref|ZP_05143050.1| hypothetical protein Mtube_19505 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260188553|ref|ZP_05766027.1| hypothetical protein MtubCP_21377 [Mycobacterium tuberculosis
           CPHL_A]
 gi|260202680|ref|ZP_05770171.1| hypothetical protein MtubT4_21968 [Mycobacterium tuberculosis T46]
 gi|260206868|ref|ZP_05774359.1| hypothetical protein MtubK8_21506 [Mycobacterium tuberculosis K85]
 gi|289445098|ref|ZP_06434842.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis
           T46]
 gi|289449203|ref|ZP_06438947.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis
           CPHL_A]
 gi|289555767|ref|ZP_06444977.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis KZN
           605]
 gi|289571734|ref|ZP_06451961.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis
           T17]
 gi|289576235|ref|ZP_06456462.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis K85]
 gi|289747337|ref|ZP_06506715.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           02_1987]
 gi|289752222|ref|ZP_06511600.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis
           T92]
 gi|289755631|ref|ZP_06515009.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           EAS054]
 gi|289759660|ref|ZP_06519038.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|289763681|ref|ZP_06523059.1| hypothetical integral membrane protein yrbE4A [Mycobacterium
           tuberculosis GM 1503]
 gi|294995729|ref|ZP_06801420.1| hypothetical protein Mtub2_14793 [Mycobacterium tuberculosis 210]
 gi|297636157|ref|ZP_06953937.1| hypothetical protein MtubK4_18625 [Mycobacterium tuberculosis KZN
           4207]
 gi|297733157|ref|ZP_06962275.1| hypothetical protein MtubKR_18795 [Mycobacterium tuberculosis KZN
           R506]
 gi|298526981|ref|ZP_07014390.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|306777851|ref|ZP_07416188.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu001]
 gi|306782582|ref|ZP_07420919.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu002]
 gi|306786400|ref|ZP_07424722.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu003]
 gi|306790769|ref|ZP_07429091.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu004]
 gi|306795299|ref|ZP_07433601.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu005]
 gi|306799487|ref|ZP_07437789.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu006]
 gi|306805333|ref|ZP_07442001.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu008]
 gi|306809519|ref|ZP_07446187.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu007]
 gi|306969626|ref|ZP_07482287.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu009]
 gi|306973969|ref|ZP_07486630.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu010]
 gi|307081677|ref|ZP_07490847.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu011]
 gi|307086285|ref|ZP_07495398.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu012]
 gi|313660488|ref|ZP_07817368.1| hypothetical protein MtubKV_18790 [Mycobacterium tuberculosis KZN
           V2475]
 gi|2924438|emb|CAA17738.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE4A
           [Mycobacterium tuberculosis H37Rv]
 gi|31620274|emb|CAD95717.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE4A
           [Mycobacterium bovis AF2122/97]
 gi|121495068|emb|CAL73554.1| Conserved hypothetical integral membrane protein yrbE4A
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124599616|gb|EAY58720.1| hypothetical integral membrane protein yrbE4A [Mycobacterium
           tuberculosis C]
 gi|134152356|gb|EBA44401.1| hypothetical integral membrane protein yrbE4A [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148507517|gb|ABQ75326.1| conserved hypothetical integral membrane protein YrbE4a
           [Mycobacterium tuberculosis H37Ra]
 gi|148723235|gb|ABR07860.1| hypothetical integral membrane protein yrbE4A [Mycobacterium
           tuberculosis F11]
 gi|224775031|dbj|BAH27837.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253322046|gb|ACT26649.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis
           KZN 1435]
 gi|289418017|gb|EFD15257.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis
           T46]
 gi|289422161|gb|EFD19362.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis
           CPHL_A]
 gi|289440399|gb|EFD22892.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis KZN
           605]
 gi|289540666|gb|EFD45244.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis K85]
 gi|289545488|gb|EFD49136.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis
           T17]
 gi|289687865|gb|EFD55353.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           02_1987]
 gi|289692809|gb|EFD60238.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis
           T92]
 gi|289696218|gb|EFD63647.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           EAS054]
 gi|289711187|gb|EFD75203.1| hypothetical integral membrane protein yrbE4A [Mycobacterium
           tuberculosis GM 1503]
 gi|289715224|gb|EFD79236.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|298496775|gb|EFI32069.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|308213831|gb|EFO73230.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu001]
 gi|308324772|gb|EFP13623.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu002]
 gi|308329036|gb|EFP17887.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu003]
 gi|308332875|gb|EFP21726.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu004]
 gi|308336458|gb|EFP25309.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu005]
 gi|308340336|gb|EFP29187.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu006]
 gi|308344191|gb|EFP33042.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu007]
 gi|308348121|gb|EFP36972.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu008]
 gi|308352885|gb|EFP41736.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu009]
 gi|308356698|gb|EFP45549.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu010]
 gi|308360652|gb|EFP49503.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu011]
 gi|308364269|gb|EFP53120.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu012]
 gi|323717843|gb|EGB27034.1| hypothetical protein TMMG_03675 [Mycobacterium tuberculosis
           CDC1551A]
 gi|326905343|gb|EGE52276.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis
           W-148]
 gi|328460274|gb|AEB05697.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis KZN
           4207]
 gi|328864220|gb|AEB53193.1| conserved integral membrane protein YRBE4A [Mycobacterium
           tuberculosis]
          Length = 254

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 97/243 (39%), Gaps = 4/243 (1%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           + +      + +          ++F+ FL     Q + V    +   +L+S     ++A 
Sbjct: 9   ARAVGGFFEMSMDTARAAFRRPFQFREFL----DQTWMVARVSLVPTLLVSIPFTVLVAF 64

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                L + GA   S    +   + ++G ++T +++AG   +AI A++G+  I EEIDA+
Sbjct: 65  TLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAM 124

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R +G+D ++ L+ PR+ A  +   LL  L     + G          +    F +     
Sbjct: 125 RVLGIDPIQRLVVPRVLASTLVALLLNGLVCAIGLSGGYAFSVFLQGVNPGAFINGLTVL 184

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L  +    IKA       G+V    G  V      +G  V   VV +   + +I+ + 
Sbjct: 185 TGLRELILAEIKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVM 244

Query: 365 AIF 367
              
Sbjct: 245 TAI 247


>gi|226305213|ref|YP_002765171.1| YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229490562|ref|ZP_04384400.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
 gi|226184328|dbj|BAH32432.1| putative YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229322382|gb|EEN88165.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
          Length = 286

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 51/272 (18%), Positives = 115/272 (42%), Gaps = 9/272 (3%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
               + F      + +  V  ++ +  Q       I+ T       ++++   L L+ ++
Sbjct: 5   RGRGDQFLLKSRKVARIPVNALDRAGEQMSFYARAIAWTPRTL---HRYRKETLRLLAEV 61

Query: 161 YY------VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
            +      V    + V+ ++S  TG V+  QG   L Q G+ + +  L + +  REI  +
Sbjct: 62  TFGSGALAVIGGTIGVIAMMSGFTGVVVGLQGFAALEQLGSSVLTGFLSAYVNTREIAPI 121

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           + A+ ++   G    A++G+M+I+EEIDA+  M +  V  L++ R+ A  +++  L I+ 
Sbjct: 122 VAALALSATVGCGFTAQLGAMRISEEIDALEVMAVPSVPFLVTTRMIAGFVAVIPLYIVG 181

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
             +A + + ++   +       +   F+      ++     K    A  + ++    GF 
Sbjct: 182 LLAAYLASRVISTVFNGQSTGSYDHYFNLFLPPQDVLYSFAKVLVFAFVLILIHCYYGFH 241

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
                  +G  V   V  +I  + ++D   ++
Sbjct: 242 ASGGPAGVGVAVGRAVRAAIVTIAVLDFFLSL 273


>gi|120406152|ref|YP_955981.1| hypothetical protein Mvan_5204 [Mycobacterium vanbaalenii PYR-1]
 gi|119958970|gb|ABM15975.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 237

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 49/234 (20%), Positives = 96/234 (41%), Gaps = 4/234 (1%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
           + +    +     ++F+ FL     Q + +    +   +L++     ++A      L + 
Sbjct: 1   MSLDTFVKTFRRPFQFREFL----EQTWMIARVSLVPTLLVAIPFTVLVAFTLNILLREI 56

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           GA   S    +   + ++G ++T +++AG   +AI A++G+  I EEIDA+R +G+D ++
Sbjct: 57  GAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQ 116

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            L+ PR+ A      LL  L     + G  +       +    F +       L  +   
Sbjct: 117 RLVVPRVLASTFVALLLNGLVCLIGLSGGYVFSVFLQGVNPGAFINGLTVLTGLGELVLA 176

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            IKA       G+V    G  V      +G  V   VV +   + +I+ +    
Sbjct: 177 EIKALLFGVVAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVIMTAV 230


>gi|269124785|ref|YP_003298155.1| hypothetical protein Tcur_0520 [Thermomonospora curvata DSM 43183]
 gi|268309743|gb|ACY96117.1| protein of unknown function DUF140 [Thermomonospora curvata DSM
           43183]
          Length = 262

 Score =  176 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 56/243 (23%), Positives = 110/243 (45%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
              + +G +     E    ++  + +    + Q +++       VIL++   GA +A Q 
Sbjct: 12  GLLNQVGELFVVALEGLRRTWDVRTWFWEFVEQCWFLARVTSIPVILVALPLGATVALQV 71

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
               +Q GA+  +   + +  +RE+  +  A++IAG  GSA+ A++G+ +I +E+DA+  
Sbjct: 72  GQVAAQLGAQSATGGAVIVGLVREVAPIAAAMIIAGAGGSAMTADMGTRRIRDELDAMEV 131

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           M ++ +  L++PR+WA  +   LL  L   S   G  +      D+    +F    S   
Sbjct: 132 MAINPIHRLVTPRLWAASLISTLLVSLVVLSGAAGGFVFNVLLQDVTPGAYFDGATSLLQ 191

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
            +++   L+KA       GIVA   G         +G+ V   +V +  +V  ++ +   
Sbjct: 192 TSDLVVTLLKAWLFGMIAGIVACYMGMNCASTPVGVGRAVNQAIVVAFLLVFALNYVITT 251

Query: 367 FYF 369
            YF
Sbjct: 252 VYF 254


>gi|42523258|ref|NP_968638.1| ABC transporter permease protein [Bdellovibrio bacteriovorus HD100]
 gi|39575463|emb|CAE79631.1| ABC transporter permease protein [Bdellovibrio bacteriovorus HD100]
          Length = 274

 Score =  176 bits (448), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 64/264 (24%), Positives = 129/264 (48%), Gaps = 2/264 (0%)

Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
           S       +G+ + K +  +     ++ L +  T      +  F+  +  +  Q+Y+ G 
Sbjct: 3   SLLAQIDSLGRSVTKNLEYTARVLLMVYLSLRAT--ILDRAQGFRQIVGVISAQIYFTGW 60

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             +P++ +++  TG++I  Q    LS  G      + + ++ +RE G LL A+++  RSG
Sbjct: 61  QALPLISVLALGTGSIILLQSLSNLSLLGGTQMIGNFLIVMIVREAGPLLVALVVIARSG 120

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           +A+ +E+G+M+ N EI+A+ +MG++ +  ++ PR+   IIS+  L    NF A+IG  +V
Sbjct: 121 TAVASEVGNMRANREIEALESMGINPLSFIVFPRVLGGIISVLGLAFYFNFIALIGGFLV 180

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                D+P A +           ++   L+K  F    I +V   +G +V    + + + 
Sbjct: 181 TKFVQDLPLAFYTDSLMRAFAKEDVLIFLLKNGFSGMIIFVVCCYQGLSVKRSPHEVPQV 240

Query: 346 VTTCVVQSISIVIIIDSLFAIFYF 369
            T  VV SI  V++ + +    ++
Sbjct: 241 TTQAVVNSIIFVVVFNLIVTALFY 264


>gi|91215158|ref|ZP_01252130.1| hypothetical protein P700755_12712 [Psychroflexus torquis ATCC
           700755]
 gi|91186763|gb|EAS73134.1| hypothetical protein P700755_12712 [Psychroflexus torquis ATCC
           700755]
          Length = 247

 Score =  176 bits (448), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 56/245 (22%), Positives = 105/245 (42%), Gaps = 2/245 (0%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +    +G       E      K       +++++  + +S + +V+ ISF  GAVIA Q 
Sbjct: 4   NYIKSIGQYFIMIYETFRKMTKTSELKRLILQELDDLIISSLGIVVFISFFIGAVIAIQT 63

Query: 187 AFQLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           A   S  F  +           + E      A+++AG+ GS I + IG+M+++E+IDA+ 
Sbjct: 64  ALNFSNPFVPKSLIGFAARQSIILEFAPTFVAIIMAGKVGSYITSSIGTMRVSEQIDALE 123

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MG++ +  L+ P+I A+    P +  ++ F  IIGA         +    F +      
Sbjct: 124 VMGINSLNYLVFPKIIAMC-MFPFVIAISMFVGIIGAYTASVYGGFLSSEQFLAGLQEDF 182

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
               +F   +K+   A  +  V    G+ +   S  +G+  TT  V +  I+I ++    
Sbjct: 183 IPFQVFYAFLKSFVFAIILATVPAFHGYYMKGGSLEVGRAATTSFVWTSVIIIFMNYFIT 242

Query: 366 IFYFA 370
               +
Sbjct: 243 QLLLS 247


>gi|319950492|ref|ZP_08024405.1| putative YrbE family protein [Dietzia cinnamea P4]
 gi|319435851|gb|EFV91058.1| putative YrbE family protein [Dietzia cinnamea P4]
          Length = 285

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 52/265 (19%), Positives = 110/265 (41%), Gaps = 6/265 (2%)

Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGV 165
             +   +   +N   S    L   +        +   ++  +L LI ++ +      V  
Sbjct: 12  ARLRALVRGPVNSFDSLGDQLAFHLRAIRWIPQTIVHYRHEVLRLIAEVTFGVGTLAVLG 71

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             + V++++S  TG V+  QG   L Q G+ + +  L + +  RE+  ++ ++ ++   G
Sbjct: 72  GTIGVIVMMSGFTGVVVGLQGYAALDQIGSSVLTGFLSAYVNTREVAPVVASLALSATVG 131

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
               A++G+M+I+EEIDA+  M +  V  L++ R+ A  I++  L ++   S+ +    V
Sbjct: 132 CGFTAQLGAMRISEEIDALEVMAIPSVPYLVTTRVIAGFIAVIPLYVVGLLSSYLATRGV 191

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                      F   FH      ++    IK    A  + ++    G+        +G  
Sbjct: 192 NTMIQGQSTGSFDHYFHLFLPPEDVIYSFIKVIIFAFVLVMIHCYYGYTASGGPAGVGVA 251

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
           V   V  +I +V I++    +  + 
Sbjct: 252 VGRAVRTTIVVVAILNFFVGLALWG 276


>gi|120401520|ref|YP_951349.1| hypothetical protein Mvan_0498 [Mycobacterium vanbaalenii PYR-1]
 gi|119954338|gb|ABM11343.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 269

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 54/243 (22%), Positives = 114/243 (46%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             I+G + + T +   + +K        + Q ++V    +   + +S     + +     
Sbjct: 25  LSIIGGLYAMTLDMFVAMFKPPFQWREFLLQTWFVARVSMVPALTLSIPLVVLTSFTFNT 84

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L +FGA  FS    ++  + +IG  +T +++AG   SA+ A++GS  I EE+DA+R +G
Sbjct: 85  LLGEFGAADFSGTGAALGAVNQIGPFVTVLVVAGAGASAMCADLGSRTIREEVDAMRVLG 144

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD +  L+ PR+ A  +   LL+ +   + ++GA +    +  +    F +       L 
Sbjct: 145 LDPIHSLVVPRVLATTLVAVLLSSVVTVTGLLGAFLFSVYFQHVTPGSFVASMTLITGLG 204

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           ++   L+KA       G++A  +G  V   +  +G  V+  VV +  ++ +++++     
Sbjct: 205 DVLVSLVKATLFGFVAGLIACYQGLRVQKGAAGVGNAVSETVVIAFLLLFVVNAIVTAVG 264

Query: 369 FAI 371
           F +
Sbjct: 265 FEV 267


>gi|254818557|ref|ZP_05223558.1| hypothetical protein MintA_01474 [Mycobacterium intracellulare ATCC
           13950]
          Length = 289

 Score =  176 bits (447), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 57/255 (22%), Positives = 111/255 (43%), Gaps = 4/255 (1%)

Query: 121 FINDSCSQAHILG----LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +  + LG    L +          +  +      +RQ  ++  + V   +L++ 
Sbjct: 29  VVRHPLASLNTLGEQYILAVRTVEYCMVDLFTGRFQWAEFVRQGAFMAATAVLPTVLVAL 88

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G  ++ Q A   +Q GA   +     +  +R+   L+ AV++A   GSAI A++GS  
Sbjct: 89  PIGVTLSIQFALLANQVGATSLAGAASGLAVIRQAASLVAAVLMASAVGSAITADLGSRT 148

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           + EE DA+  MG+  +R L+ PR  A I+    LT +  F   + + +    +       
Sbjct: 149 MREETDAMEVMGVSVIRRLVVPRFAAAIMVGVALTGITCFVGFLASYLFNVYFQRGAPGS 208

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           F + F S AT  ++   L+KA      + ++A ++G         +   V   VV+SI +
Sbjct: 209 FVATFSSFATTEDMIVALLKAVIYGAIVAVIACQKGLFTKGGPAGVANSVNAAVVESILV 268

Query: 357 VIIIDSLFAIFYFAI 371
           ++I++   +  Y  +
Sbjct: 269 LMIVNVGISQLYNTL 283


>gi|296166535|ref|ZP_06848966.1| membrane protein YrbE4A [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295898147|gb|EFG77722.1| membrane protein YrbE4A [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 254

 Score =  176 bits (447), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 97/239 (40%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
           A  +G       +   ++++    L   + Q + +    +   +L+S     ++A     
Sbjct: 9   ARAVGGFFEMMIDTGRATFRRPFQLGEFLEQTWMIARVSLVPTLLVSIPFTVLVAFTLNI 68

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L + GA   S    +   + ++G ++T +++AG   +AI A++G+  I EEIDA+R +G
Sbjct: 69  LLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLG 128

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +D V  L+ PR+ A  +   LL  L     + G  +       +    F +       L 
Sbjct: 129 IDPVHRLVVPRVLASTVVALLLNGLVCAIGLSGGYVFSVFLQGVNPGAFINGLTVLTGLR 188

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +    +KA       G+V    G  V      +G  V   VV +   + +I+ +    
Sbjct: 189 ELVLAEVKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVMTAI 247


>gi|300783702|ref|YP_003763993.1| ABC transporter permease [Amycolatopsis mediterranei U32]
 gi|299793216|gb|ADJ43591.1| ABC transport system permease protein [Amycolatopsis mediterranei
           U32]
          Length = 283

 Score =  176 bits (447), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 107/260 (41%), Gaps = 10/260 (3%)

Query: 117 KIVKFINDSCSQAHILG-LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG-------- 167
           ++ + ++        LG  ++        +    + +L  ++R +  V            
Sbjct: 11  RVREAVDRRFGFLDTLGDQILFFIRAIAWTPRALRRYLREVVRLLAEVSFGSGALAVIGG 70

Query: 168 -VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + V+I ++  TG V+  QG   L+Q G   F+  + +    REI  L++ + ++   G 
Sbjct: 71  TIGVMIGMTVATGTVVGLQGYSALNQVGTSAFAGFVSAYFNTREIAPLVSGLALSATVGC 130

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
              A++G+M+I+EEIDA+  MG+  V  L++ R+ A  +++  L  +   S+ + +  + 
Sbjct: 131 GFTAQLGAMRISEEIDALEVMGIPSVPYLVTTRVIAGFLAVIPLYAIGLLSSYLASRQIT 190

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
             ++      +   F       ++     K    +  + +     GF        +G  V
Sbjct: 191 VWFFGQSAGTYDHYFLLFLPPGDVLWSFGKVLVFSIVVVLAHCYYGFRASGGPAGVGVAV 250

Query: 347 TTCVVQSISIVIIIDSLFAI 366
              V  +I  + ++D   ++
Sbjct: 251 GRAVRTAIVAISVLDFFLSL 270


>gi|134098921|ref|YP_001104582.1| putative ABC transport system permease protein [Saccharopolyspora
           erythraea NRRL 2338]
 gi|291009385|ref|ZP_06567358.1| putative ABC transport system permease protein [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133911544|emb|CAM01657.1| putative ABC transport system permease protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 279

 Score =  176 bits (446), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 108/266 (40%), Gaps = 10/266 (3%)

Query: 111 HYHIGKKIVKFINDSCSQAHILG-LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG-- 167
              IG++    +       + LG  ++       A+    + +L  ++R +  V      
Sbjct: 1   MIGIGQRARTVLRRPGDTLYNLGDQLLFYLYALGAAPLAVRRYLREVVRLLAEVTFGSGA 60

Query: 168 -------VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
                  + V++ +   TG  +  QG   L+Q G    +  + +    REI  L+  + +
Sbjct: 61  LAVIGGTIGVILGMCVFTGVTVGLQGFSALNQIGISTLTGFMTAYFNTREIAPLVAGLAL 120

Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280
           +   G+   A++G+M+I+EEIDA+  M +  +  L++ RI A  +++  L ++   ++ +
Sbjct: 121 SATVGAGFTAQLGAMRISEEIDALEVMAVRSLPYLVTTRIVAGFVAVVPLYVIGLLTSYV 180

Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
            +  V   ++      +   F       ++     K    + A+ +     G+       
Sbjct: 181 ASRQVTVWFFGQSGGTYDHYFSLFLPPVDVLWSFGKVLVFSVAVILTHCFYGYRAAGGPA 240

Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAI 366
            +G  V   V  SI ++ ++D   ++
Sbjct: 241 GVGVAVGRAVRTSIVLISVLDLFLSL 266


>gi|108798619|ref|YP_638816.1| hypothetical protein Mmcs_1650 [Mycobacterium sp. MCS]
 gi|119867717|ref|YP_937669.1| hypothetical protein Mkms_1676 [Mycobacterium sp. KMS]
 gi|126434218|ref|YP_001069909.1| hypothetical protein Mjls_1625 [Mycobacterium sp. JLS]
 gi|108769038|gb|ABG07760.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
 gi|119693806|gb|ABL90879.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
 gi|126234018|gb|ABN97418.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 266

 Score =  176 bits (446), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 54/243 (22%), Positives = 114/243 (46%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             I+G + + T +   + +K        + Q ++V    +   + +S     + +     
Sbjct: 22  LSIIGGLYAMTLDMFVAMFKPPFQWREFLLQTWFVARVSMVPALTLSIPLVVLTSFTFNT 81

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L +FGA  FS    ++  + +IG  +T +++AG   SA+ A++GS  I EE+DA+R +G
Sbjct: 82  LLGEFGAADFSGTGAALGAVNQIGPFVTVLVVAGAGASAMCADLGSRTIREEVDAMRVLG 141

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD +  L+ PR+ A  +   LL+ +   + ++GA +    +  +    F +       L 
Sbjct: 142 LDPIHSLVVPRVLATTLVAVLLSSVVTVTGLLGAFLFSVYFQHVTPGSFVASMTLITGLG 201

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           ++   L+KA       G++A  +G  V   +  +G  V+  VV +  ++ +++++     
Sbjct: 202 DVLVSLVKATLFGFVAGLIACYQGLRVQKGAAGVGNAVSETVVIAFLLLFVVNAIVTAVG 261

Query: 369 FAI 371
           F +
Sbjct: 262 FEV 264


>gi|328880857|emb|CCA54096.1| toluene tolerance protein [Streptomyces venezuelae ATCC 10712]
          Length = 268

 Score =  176 bits (446), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 46/246 (18%), Positives = 102/246 (41%), Gaps = 9/246 (3%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVIAQ 184
            ++             + +L  + R +  V             + V++ ++  TG V+  
Sbjct: 14  QLLFYVKALLWIPRTLRRYLKEVQRLLAEVAFGSGGLGVIGGTIGVMVAMTLFTGTVVGL 73

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L Q G   F+  + +    REI  L+  + ++   G+   A++G+M+INEE+DA+
Sbjct: 74  QGYAALEQIGTAAFTGFVSAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVDAL 133

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  +  L++ RI A ++++  L  +   S+ + +  V   +       +   F+  
Sbjct: 134 EGMGIRSMPYLVTTRIIAGVVAIVPLYAIGLLSSYLASRYVTVLFNGQSQGTYDHYFNLF 193

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            +  ++   ++K    +  + I     GF        +G  V   V  +I ++ + D   
Sbjct: 194 LSPTDVLLSVLKVLIFSVMVIIAHCYYGFRASGGPAGVGIAVGRSVRNAIVLISVTDFFL 253

Query: 365 AIFYFA 370
           ++  + 
Sbjct: 254 SLALWG 259


>gi|325286981|ref|YP_004262771.1| hypothetical protein Celly_2079 [Cellulophaga lytica DSM 7489]
 gi|324322435|gb|ADY29900.1| protein of unknown function DUF140 [Cellulophaga lytica DSM 7489]
          Length = 260

 Score =  176 bits (446), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 53/246 (21%), Positives = 101/246 (41%), Gaps = 2/246 (0%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            +    +G       E      K+      +++++  +    + ++I ISF  G V+  Q
Sbjct: 16  MNYIASIGSYFIMIKEVFKKPTKWSIMKKLILKEIDELVFGSLGIIIFISFFIGGVVTIQ 75

Query: 186 GAFQLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            A  L+     E           + E     T++++AG+ GS I + IG+M++ E+IDA+
Sbjct: 76  TALNLTNPLIPESLIGFAARQSVILEFAPTFTSIIMAGKVGSYITSSIGTMRVTEQIDAL 135

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG++ +  L+ P+I AL++  P    +A +  I G  I          A F       
Sbjct: 136 EVMGVNSLNYLVFPKIIALLL-YPFAIAIAMYVGIFGGWIAGVFGGFTTSASFIEGIQLD 194

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               ++    IK+   A  I  +    G+ +   +  +GK  TT  V +   +II++ + 
Sbjct: 195 FIPYHVTYAFIKSIIFAFVIATIPSFHGYYMKGGALEVGKASTTAFVWTSVAIIILNYIL 254

Query: 365 AIFYFA 370
                 
Sbjct: 255 TQLLLG 260


>gi|315185558|gb|EFU19327.1| protein of unknown function DUF140 [Spirochaeta thermophila DSM
           6578]
          Length = 263

 Score =  176 bits (446), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 2/262 (0%)

Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167
            ++   +G + +   +D       +  VI  T  F     +       L+ Q+ + GV  
Sbjct: 3   GDILSSLGNRAITRTHDILYGIGYVATVIKETVLFFRK--RRGEAGRVLVLQILFTGVEA 60

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           + V+ L++   GA+I  QG   L QFG       ++  +  RE+G +LTA ++  RSG+A
Sbjct: 61  LNVIALLALGIGALIIIQGVSLLPQFGQGDLVYPILIAVITRELGPILTAFIVTARSGTA 120

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I  EIG+M ++ EI+A    G+D +  L+ PR    I+++ LL +  N   ++G+  V  
Sbjct: 121 IATEIGTMVVSHEIEAYMAFGIDPISYLVVPRFLGAIVAVTLLNVYFNIFGLLGSFFVTS 180

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
             + I FA +F          +I + L+K+      I +V    GF V   S  + +   
Sbjct: 181 LIHPIQFAEYFHNLLLRLKPVDILSSLVKSATFGAVIALVGTYSGFQVERASTEIPQVAI 240

Query: 348 TCVVQSISIVIIIDSLFAIFYF 369
             V +     I+ D+L  + Y+
Sbjct: 241 KAVGKGFVYCIVADALLTLVYY 262


>gi|254773146|ref|ZP_05214662.1| hypothetical protein MaviaA2_00471 [Mycobacterium avium subsp.
           avium ATCC 25291]
          Length = 289

 Score =  176 bits (446), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 57/255 (22%), Positives = 111/255 (43%), Gaps = 4/255 (1%)

Query: 121 FINDSCSQAHILG----LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +  + LG    L +          +  +      +RQ  ++  + V   +L++ 
Sbjct: 29  VVRHPLASLNTLGEQYILAVRTVEYCVVDLFTGRFQWAEFVRQGAFMAATAVLPTVLVAL 88

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G  ++ Q A   +Q GA   +     +  +R+   L+ AV++A   GSAI A++GS  
Sbjct: 89  PIGVTLSIQFALLANQVGATSLAGAASGLAVIRQAASLVAAVLMASAVGSAITADLGSRT 148

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           + EE DA+  MG+  +R L+ PR  A I+    LT +  F   + + +    +       
Sbjct: 149 MREETDAMEVMGVSVIRRLVVPRFAAAIMVGVALTGITCFVGFLASYLFNVYFQRGAPGS 208

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           F + F S AT  ++   L+KA      + ++A ++G         +   V   VV+SI +
Sbjct: 209 FVATFSSFATTEDMIVALLKAVIYGAIVAVIACQKGLFTKGGPAGVANSVNAAVVESILV 268

Query: 357 VIIIDSLFAIFYFAI 371
           ++I++   +  Y  +
Sbjct: 269 LMIVNVGISELYNTL 283


>gi|307718422|ref|YP_003873954.1| transporter [Spirochaeta thermophila DSM 6192]
 gi|306532147|gb|ADN01681.1| putative transporter [Spirochaeta thermophila DSM 6192]
          Length = 263

 Score =  176 bits (446), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 2/262 (0%)

Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167
            ++   +G + +   +D       +  VI  T  F     +       L+ Q+ + GV  
Sbjct: 3   GDILSSLGNRAIARTHDILYGIGYVATVIKETVLFFRK--RRGEAGRVLVLQILFTGVEA 60

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           + V+ L++   GA+I  QG   L QFG       ++  +  RE+G +LTA ++  RSG+A
Sbjct: 61  LNVIALLALGIGALIIIQGVSLLPQFGQGDLVYPILIAVITRELGPILTAFIVTARSGTA 120

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I  EIG+M ++ EI+A    G+D +  L+ PR    I+++ LL +  N   ++G+  V  
Sbjct: 121 IATEIGTMVVSHEIEAYMAFGIDPISYLVVPRFLGAIVAVTLLNVYFNIFGLLGSFFVTS 180

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
             + I FA +F          +I + L+K+      I +V    GF V   S  + +   
Sbjct: 181 LIHPIQFAEYFHNLLLRLKPVDILSSLVKSATFGAVIALVGTYSGFQVERASTEIPQVAI 240

Query: 348 TCVVQSISIVIIIDSLFAIFYF 369
             V +     I+ D+L  + Y+
Sbjct: 241 KAVGKGFVYCIVADALLTLVYY 262


>gi|332169298|gb|AEE18553.1| protein of unknown function DUF140 [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 245

 Score =  175 bits (445), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 2/246 (0%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            S  H +G              K K     + +++  + +  + +V  ISF  GAV+A Q
Sbjct: 1   MSYLHSIGEYFLMIKNTFVKPTKGKVLRDLIFKEIDDLIIGSLGIVAFISFFVGAVVAIQ 60

Query: 186 GAFQLSQFGAE-IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            A  L+                 + E      +V++AG+ GS I + IG+M++ E+IDA+
Sbjct: 61  TALNLNNPLLPKSLIGFAARQSIILEFAPTFVSVIMAGKVGSFITSSIGTMRVTEQIDAL 120

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG++ +  L+ P+I A++I  P L  +  F  IIGA          P   F S     
Sbjct: 121 EVMGINSLNYLVFPKIVAMLI-YPFLIAIGMFLGIIGAYTAAVYGGFAPSNDFLSGLQQD 179

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
                +F    K    A  +  +    G+ +   +  +GK  TT  V +   +I+++ + 
Sbjct: 180 FIPFQLFYAFFKTFLFAFLLATIPAYHGYYMRGGALEVGKASTTSFVWTSVAIILVNFIT 239

Query: 365 AIFYFA 370
                +
Sbjct: 240 TQLLLS 245


>gi|326382982|ref|ZP_08204671.1| hypothetical protein SCNU_08596 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326198118|gb|EGD55303.1| hypothetical protein SCNU_08596 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 286

 Score =  175 bits (445), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 109/252 (43%), Gaps = 9/252 (3%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVI 172
           +K ++ +  Q       ++   +       +   ++ L+ ++ +      V    V V++
Sbjct: 23  LKLLDGAGEQMSFYARTLAWIPKTLVH---YTREVMRLLAEVAFGSGGLAVIGGTVGVMV 79

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
           L+S  TG V+  QG   L Q G++  +  L + +  RE+  L+  + ++   G    A++
Sbjct: 80  LMSGFTGVVVGMQGYAALDQIGSQALTGFLSAYVNTREVAPLVAGLALSATVGCGFTAQL 139

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           G+M+I+EEIDA+  M +  +  L+S R+ A  I++  L +L   +A + + +V   +   
Sbjct: 140 GAMRISEEIDALEVMAVPSIPFLVSSRVIAGFIAVIPLYVLGLMAAYLASRVVNTVFNGQ 199

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
               +   F+      ++     K    A  I ++    G+        +G  V   V  
Sbjct: 200 STGSYDHYFNLFLPPVDVLWSFGKVLIFAFVIILIHCYYGYFASGGPAGVGVAVGHAVRT 259

Query: 353 SISIVIIIDSLF 364
           ++ ++ ++D   
Sbjct: 260 ALVLIAVMDFFL 271


>gi|150025444|ref|YP_001296270.1| ABC transporter permease [Flavobacterium psychrophilum JIP02/86]
 gi|149771985|emb|CAL43461.1| Probable ABC-type transport system, permease component
           [Flavobacterium psychrophilum JIP02/86]
          Length = 248

 Score =  175 bits (445), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 51/246 (20%), Positives = 101/246 (41%), Gaps = 2/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G       E      K+      + +++  + +  + +V  ISF  G V+A 
Sbjct: 3   LLRYLSQIGRYFLMIVEIFKKPTKWSVMRTLIFKEIDDLIIGSLGIVAFISFFVGGVVAI 62

Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q A  L+      +          + E      ++++AG+ GS I + IG+M++ E+IDA
Sbjct: 63  QTALNLTNPLIPKYLIGFATRQSIILEFAPTFISIIMAGKMGSFITSSIGTMRVTEQIDA 122

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++ +  L+ P++ AL++  P L  +A F  I+G  I          A F +    
Sbjct: 123 LEVMGVNSLNYLVFPKLIALLL-YPFLIGIAMFLGILGGYIASVYGGFGTHADFLNGLQK 181

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +I    IK    A  +  +    G+ +   +  +GK  T   V +  ++I+++ +
Sbjct: 182 EFIPFHITYAFIKTLIFALILATIPSFHGYYMKGGALEVGKASTVSFVWTSVMIILMNYI 241

Query: 364 FAIFYF 369
                 
Sbjct: 242 LTQLLL 247


>gi|108801582|ref|YP_641779.1| hypothetical protein Mmcs_4619 [Mycobacterium sp. MCS]
 gi|119870736|ref|YP_940688.1| hypothetical protein Mkms_4707 [Mycobacterium sp. KMS]
 gi|108772001|gb|ABG10723.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
 gi|119696825|gb|ABL93898.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
          Length = 254

 Score =  175 bits (444), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 50/243 (20%), Positives = 99/243 (40%), Gaps = 4/243 (1%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           + +    + + I    +     ++F+ FL     Q + +    +   +L++     ++A 
Sbjct: 9   ARAVGGFVEMSIDTFVKTFRRPFQFREFL----DQTWMIARVSLIPTLLVAIPFTVLVAF 64

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                L + GA   S    +   + ++G ++T +++AG   +AI A++G+  I EEIDA+
Sbjct: 65  TLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAM 124

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R +G+D ++ L+ PR+ A      LL  L     + G  +       +    F +     
Sbjct: 125 RVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGLAGGYVFSVFLQGVNPGAFINGLTVL 184

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L  +    IKA       G+V    G  V      +G  V   VV +   + +I+ + 
Sbjct: 185 TGLGELVLAEIKALLFGVVAGLVGCYRGLTVQGGPKGVGIAVNETVVYAFICLFVINVIM 244

Query: 365 AIF 367
              
Sbjct: 245 TAV 247


>gi|49072908|gb|AAT51759.1| TrnB1 [Mycobacterium vanbaalenii PYR-1]
          Length = 269

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 53/243 (21%), Positives = 114/243 (46%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             ++G + + T +   + +K        + Q ++V    +   + +S     + +     
Sbjct: 25  LSVIGGLYAMTLDMFVAMFKPPFQWREFLLQTWFVARVSMVPALTLSIPLVVLTSFTFNT 84

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L +FGA  FS    ++  + +IG  +T +++AG   SA+ A++GS  I EE+DA+R +G
Sbjct: 85  LLGEFGAADFSGTGAALGAVNQIGPFVTVLVVAGAGASAMCADLGSRTIREEVDAMRVLG 144

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD +  L+ PR+ A  +   LL+ +   + ++GA +    +  +    F +       L 
Sbjct: 145 LDPIHSLVVPRVLATTLVAVLLSSVVTVTGLLGAFLFSVYFQHVTPGSFVASMTLITGLG 204

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           ++   L+KA       G++A  +G  V   +  +G  V+  VV +  ++ +++++     
Sbjct: 205 DVLVSLVKATLFGFVAGLIACYQGLRVQKGAAGVGNAVSETVVIAFLLLFVVNAIVTAVG 264

Query: 369 FAI 371
           F +
Sbjct: 265 FEV 267


>gi|295690359|ref|YP_003594052.1| hypothetical protein Cseg_2991 [Caulobacter segnis ATCC 21756]
 gi|295432262|gb|ADG11434.1| protein of unknown function DUF140 [Caulobacter segnis ATCC 21756]
          Length = 266

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 66/250 (26%), Positives = 115/250 (46%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +      +G V    G            L    RQ+  +G   +PVV L +  
Sbjct: 12  IRSLGARATIAVRAVGAVGLFAGRGVICILTPPWRLGHWGRQLTTIGFFSLPVVALTALF 71

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TGA +A        +  A      ++++   RE+G +L A+M+AGR  +AI AEIG+M+ 
Sbjct: 72  TGAALALNIHIGGGRLNAAQAMPQIVALGITRELGPVLAALMLAGRVSAAIAAEIGAMRA 131

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++DA+RT+  D +R L++PR+ A +++LPLLT++A+   + G  +V     D     +
Sbjct: 132 TEQLDAMRTLSTDPIRYLVAPRLAAAVLALPLLTLVADIIGVAGGGVVAVGVLDFSAPTY 191

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                   T  +I +GL+KA      + ++    G+     +  +G+  T  VV +  ++
Sbjct: 192 ARAAARFLTGWDIGSGLVKAAVFGFVVALMGCYHGYVATGGARGVGRATTRAVVSAAILI 251

Query: 358 IIIDSLFAIF 367
              D L    
Sbjct: 252 FACDYLLTTL 261


>gi|146298213|ref|YP_001192804.1| hypothetical protein Fjoh_0449 [Flavobacterium johnsoniae UW101]
 gi|146152631|gb|ABQ03485.1| protein of unknown function DUF140 [Flavobacterium johnsoniae
           UW101]
          Length = 248

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 52/247 (21%), Positives = 98/247 (39%), Gaps = 2/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G       E      K+      + +++  + +  + +V  ISF  G V+A 
Sbjct: 3   LIRYLSQIGKYFLMLKEIFNKQTKWPVMKNLIFKEIDDLIIDSLGIVCFISFFIGGVVAI 62

Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q A  L+      +          + E      +V++AG+ GS I + IG+M++ E+IDA
Sbjct: 63  QTALNLTNPLIPKYLIGFATRQSVVLEFAPTFISVIMAGKMGSYITSSIGTMRVTEQIDA 122

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++ V  L+ P+I AL +  P +  ++ F  I G  +          A F      
Sbjct: 123 LEVMGVNSVNYLVFPKIIAL-LMYPFVIGISMFLGIFGGWLACAYGGFSTGADFIMGAQK 181

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +I    IK    A  +  +    G+ +   +  +GK  TT  V +   +I+++ +
Sbjct: 182 DFIPFHITYAFIKTLIFAMLLATIPSFHGYYMKGGALEVGKASTTSFVWTSVTIILLNYI 241

Query: 364 FAIFYFA 370
                  
Sbjct: 242 LTQLLLG 248


>gi|118463749|ref|YP_880207.1| TrnB1 protein [Mycobacterium avium 104]
 gi|118165036|gb|ABK65933.1| TrnB1 protein [Mycobacterium avium 104]
          Length = 272

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 110/262 (41%), Gaps = 1/262 (0%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
            +   +  G   ++   D       +G + + + +     ++        + Q ++V   
Sbjct: 4   LRAERWSTGLPALRLKVDVSGAMQAVGALFAMSADAVKYLFRRPFQWREFLEQSWFVARV 63

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +   +L++     +++      L + GA   S    +   + ++G L+T +++AG   +
Sbjct: 64  SLAPTLLVAIPFTVLVSFTLNILLRELGAADLSGAGAAFGAVTQLGPLVTVLIVAGAGAT 123

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ A++GS  I EEIDA+  +G++ ++ L++PR+ A  +   LL  L     ++G  +  
Sbjct: 124 AMCADLGSRTIREEIDAMEVLGINPIQRLVTPRMLASGLVAFLLNSLVVIIGVLGGYVFS 183

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKK 345
               D+    F +       +  +    IKA       G+VA   G +  G  + ++G  
Sbjct: 184 VFVQDVNPGAFAAGITLLTGVPEVVISCIKAALFGLIAGLVACYRGLSITGGGAKAVGNA 243

Query: 346 VTTCVVQSISIVIIIDSLFAIF 367
           V   VV +   + +++ +    
Sbjct: 244 VNETVVYAFMSLFVVNVVVTAI 265


>gi|32141168|ref|NP_733570.1| ABC-transporter integral membrane protein [Streptomyces coelicolor
           A3(2)]
 gi|256787959|ref|ZP_05526390.1| ABC-transporter integral membrane protein [Streptomyces lividans
           TK24]
 gi|289771846|ref|ZP_06531224.1| ABC-transporter integral membrane protein [Streptomyces lividans
           TK24]
 gi|24413768|emb|CAD55305.1| putative ABC-transporter integral membrane protein [Streptomyces
           coelicolor A3(2)]
 gi|289702045|gb|EFD69474.1| ABC-transporter integral membrane protein [Streptomyces lividans
           TK24]
          Length = 268

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 102/246 (41%), Gaps = 9/246 (3%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVIAQ 184
            ++             + +L  + R +  V             + V+I ++  TG V+  
Sbjct: 14  QLLFYVRALLWVPRTLRRYLKEVQRLLAEVAFGSGGLGVIGGTIGVMIAMTLFTGTVVGI 73

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L Q G   F+  + +    REI  L+  + ++   G+   A++G+M+INEE+DA+
Sbjct: 74  QGYAALDQIGTSAFTGFVSAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVDAL 133

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  +  L++ RI A ++++  L  +   S+ + +  V   +       +   F+  
Sbjct: 134 EGMGIRSMPYLVTTRIIAGVVAIIPLYAIGLLSSFLASRYVTVLFNGQSRGTYDHYFNLF 193

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            +  ++   ++K    +  + +     G+        +G  V   V  +I ++ + D   
Sbjct: 194 LSPTDVLLSVLKVLIFSVMVIVAHCYYGYRASGGPAGVGVAVGRSVRNAIVLISVTDFFL 253

Query: 365 AIFYFA 370
           ++  + 
Sbjct: 254 SLALWG 259


>gi|260061863|ref|YP_003194943.1| hypothetical protein RB2501_09685 [Robiginitalea biformata
           HTCC2501]
 gi|88785996|gb|EAR17165.1| hypothetical protein RB2501_09685 [Robiginitalea biformata
           HTCC2501]
          Length = 245

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 52/246 (21%), Positives = 103/246 (41%), Gaps = 2/246 (0%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            +    +G       E      K+      +++++  +    + ++I ISF  G V+A Q
Sbjct: 1   MNYLASIGSYAIMIVETFKKPTKWPIMRSLILKEIDELIYGSMGIIIFISFFIGGVVAIQ 60

Query: 186 GAFQLSQFGAE-IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            A  +S                 + E     T++++AG+ GS I + IG+M++ E+IDA+
Sbjct: 61  TALNISNPLIPKNLIGFATRQSVILEFAPTFTSIIMAGKVGSYITSSIGTMRVTEQIDAL 120

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG++ +  L+ P+I A+++  P +  +A +  I+G  I          A F       
Sbjct: 121 EVMGVNALNYLVFPKIIAMLL-YPFVVAIAMYVGILGGWIAGVFGGFSSSADFIEGLQLD 179

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               ++    IK+   A  I  V    GF +   +  +GK  T   V +  ++I+++ + 
Sbjct: 180 FIPFHVMYSFIKSVVFAFIIATVPSYHGFYMKGGALEVGKASTVSFVWTSVVIIVMNYIL 239

Query: 365 AIFYFA 370
                 
Sbjct: 240 TQLLLG 245


>gi|326799081|ref|YP_004316900.1| hypothetical protein Sph21_1668 [Sphingobacterium sp. 21]
 gi|326549845|gb|ADZ78230.1| protein of unknown function DUF140 [Sphingobacterium sp. 21]
          Length = 244

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 63/243 (25%), Positives = 108/243 (44%), Gaps = 1/243 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
                G  +           K   +   ++ +M  +GV  + ++ +IS   GAV+  Q A
Sbjct: 2   FFTSFGKYLLLLKSVFKKPEKASIYWKEIMHEMNSIGVGSLGLIAIISTFIGAVMTMQIA 61

Query: 188 FQL-SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           FQL S          +     + E+   ++A+++AG+ GS+I ++IGSM++ E+IDA+  
Sbjct: 62  FQLVSDLIPNSIIGQINRDSSILELSPTISALVLAGKVGSSISSQIGSMRVTEQIDALEI 121

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG++    LI P+I A I  +P+L IL+ F A+ G  I       +  A +         
Sbjct: 122 MGINAPGYLILPKILAGITMVPVLVILSIFLALSGGLIGGALSGAVTPADYIMGITGDFN 181

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
              +   L+KA      I  VA   GF V   +  +G+  T  VV S  +++  D +   
Sbjct: 182 GYTVAVALVKAFVFGFVITSVAAYHGFYVKGGALEVGQASTKSVVVSCIMILATDYVITA 241

Query: 367 FYF 369
              
Sbjct: 242 LML 244


>gi|326383821|ref|ZP_08205506.1| YrbE family protein [Gordonia neofelifaecis NRRL B-59395]
 gi|326197585|gb|EGD54774.1| YrbE family protein [Gordonia neofelifaecis NRRL B-59395]
          Length = 258

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 59/247 (23%), Positives = 112/247 (45%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           +    H LG  +   G    +  +F+  L   + Q  ++G       +L+    G  IA 
Sbjct: 5   AVEAGHTLGFALQAIGSLFVAIARFRLSLSETLNQTVFIGRVSTGPSLLLMIPVGVFIAV 64

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                  + GA  +S  +++ + + +   L+ A+M+AG +GSAI  ++GS KI EEIDA+
Sbjct: 65  SVGELAGRIGAGGYSGAVVAFIIVGQASSLVCALMMAGVAGSAICTDLGSRKIREEIDAM 124

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG++ +  L++PRI A II   +L  L   + +    +       +P   F + F   
Sbjct: 125 EVMGVNILERLVAPRIAAAIIVALVLCSLITVTGVGACFLYHVYVQHLPAGSFMATFSQY 184

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             +++    L+K+   A    IVA  +G       + +   V   VV + ++V + +++ 
Sbjct: 185 GRMSDFVMALVKSSIFALLATIVACFKGLHARGGPSGVADAVNEAVVIAFALVFVFNTVL 244

Query: 365 AIFYFAI 371
           +  Y  +
Sbjct: 245 SQLYAVM 251


>gi|324997539|ref|ZP_08118651.1| hypothetical protein PseP1_02183 [Pseudonocardia sp. P1]
          Length = 286

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 99/253 (39%), Gaps = 1/253 (0%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                  +     G +   +          + +   ++ Q   + ++   ++ ++  V G
Sbjct: 26  SLGTQLRNGVSTAGEIFRFSTATIRGFRDVRHYSSEVLHQAGILILTSGLIIWVMQGVMG 85

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V   + ++ L Q GA ++S    +   +RE+   +   + A + G  +VAE+GSM+I++
Sbjct: 86  TVCGLEASYTLKQIGAPLYSGIFNAYCSIREMAPYMWGYIFAAKVGCGLVAELGSMRISD 145

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY-DIPFAVFF 298
           EIDA+  MG+     L+  R+ A  +++P L  +      +   +V       +    + 
Sbjct: 146 EIDAMEVMGIKARSYLVGTRVIAAWLAIPFLYTVGLGIMYVTMYLVTVVQLGGVSPGGYL 205

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
             F       +    LIK       I  V    GF        +G+     ++ ++ ++ 
Sbjct: 206 YIFWLYQNPLDFLYSLIKVMSFGTTIVFVGCYFGFNATGGPVGVGRNTAKAMMINMVLIH 265

Query: 359 IIDSLFAIFYFAI 371
           I+  L    ++ +
Sbjct: 266 ILGVLGTQLFWGL 278


>gi|41406190|ref|NP_959026.1| hypothetical protein MAP0092 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41394538|gb|AAS02409.1| hypothetical protein MAP_0092 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 289

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 57/255 (22%), Positives = 110/255 (43%), Gaps = 4/255 (1%)

Query: 121 FINDSCSQAHILG----LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +  + LG    L +          +  +      +RQ  ++  + V   +L++ 
Sbjct: 29  VVRHPLASLNTLGEQYILAVRTVEYCVVDLFTGRFQWAEFVRQGAFMAATAVLPTVLVAL 88

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G  ++ Q A   +Q GA   +     +  +R+   L+ AV+ A   GSAI A++GS  
Sbjct: 89  PIGVTLSIQFALLANQVGATSLAGAASGLAVIRQAASLVAAVLTASAVGSAITADLGSRT 148

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           + EE DA+  MG+  +R L+ PR  A I+    LT +  F   + + +    +       
Sbjct: 149 MREETDAMEVMGVSVIRRLVVPRFAAAIMVGVALTGITCFVGFLASYLFNVYFQRGAPGS 208

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           F + F S AT  ++   L+KA      + ++A ++G         +   V   VV+SI +
Sbjct: 209 FVATFSSFATTEDMIVALLKAVIYGAIVAVIACQKGLFTKGGPAGVANSVNAAVVESILV 268

Query: 357 VIIIDSLFAIFYFAI 371
           ++I++   +  Y  +
Sbjct: 269 LMIVNVGISELYNTL 283


>gi|41406660|ref|NP_959496.1| hypothetical protein MAP0562 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|118465663|ref|YP_879935.1| hypothetical protein MAV_0655 [Mycobacterium avium 104]
 gi|254773611|ref|ZP_05215127.1| hypothetical protein MaviaA2_02900 [Mycobacterium avium subsp.
           avium ATCC 25291]
 gi|41395009|gb|AAS02879.1| hypothetical protein MAP_0562 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|118166950|gb|ABK67847.1| conserved hypothetical protein [Mycobacterium avium 104]
          Length = 254

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 50/243 (20%), Positives = 97/243 (39%), Gaps = 4/243 (1%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           + +      ++I          ++F  FL     Q + +    +   +L+S     ++A 
Sbjct: 9   ARAVGGFFEMMIDTGRAAFRRPFQFGEFL----DQTWMIARVSLVPTLLVSIPFTVLVAF 64

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                L + GA   S    +   + ++G ++T +++AG   +AI A++G+  I EEIDA+
Sbjct: 65  TLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAM 124

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R +G+D +  L+ PR+ A  +   LL  L     + G  +       +    F +     
Sbjct: 125 RVLGIDPIHRLVVPRVLASTVVALLLNGLVCAIGLSGGYVFSVFLQGVNPGAFINGLTVL 184

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L  +    +KA       G+V    G  V      +G  V   VV +   + +I+ + 
Sbjct: 185 TGLRELVLAEVKALLFGVMAGMVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVM 244

Query: 365 AIF 367
              
Sbjct: 245 TAI 247


>gi|315442434|ref|YP_004075313.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|315260737|gb|ADT97478.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 285

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 54/236 (22%), Positives = 105/236 (44%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +     F    +  +      +RQ  ++  + V   +L++   G  ++ Q A    Q GA
Sbjct: 44  VRTLQWFFVDLFTGRFQWQEFVRQGAFMAGTAVLPTVLVALPIGVTLSIQFALLAGQVGA 103

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
              +     +  +R+   L  A+++A   GSAI A++GS  + EE DA+  MG+  +R L
Sbjct: 104 TSLAGAASGLAVIRQAASLTAAILMAAAVGSAITADLGSRTMREETDAMEVMGVSVIRRL 163

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PR  A I+    LT +  F   + + +    + +     F + F S  T  ++   L+
Sbjct: 164 VVPRFAAAIMIGVALTGVVCFVGFLASYLFNVYFQNGAPGSFVATFASFTTTGDMIVALV 223

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           KA      + IV+ ++G +       +   V   VV+SI I+++++   +  Y  +
Sbjct: 224 KAVIFGAIVAIVSCQKGMSTRGGPTGVANSVNAAVVESILILMVVNVAISQLYIML 279


>gi|118469389|ref|YP_885535.1| ABC transporter transmembrane protein [Mycobacterium smegmatis str.
           MC2 155]
 gi|118170676|gb|ABK71572.1| ABC-transporter integral membrane protein [Mycobacterium smegmatis
           str. MC2 155]
          Length = 289

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 57/236 (24%), Positives = 106/236 (44%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +          +  +      IRQ  ++  + V   +L++   G  ++ Q A    Q GA
Sbjct: 48  VRTVQYLFTELFTGRFQWQEFIRQGAFMASTAVVPTVLVALPIGVTLSIQFALLAGQVGA 107

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
              +     +  +R+   L  AV++A   GSAI A++GS K+ EE DA+  MG+  ++ L
Sbjct: 108 TSLAGAASGLAVIRQAASLTAAVLMAAAVGSAITADLGSRKMREETDAMEVMGVSVIKRL 167

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PR  A I+    LT +  F   I + +    + D     F + F S AT  ++   LI
Sbjct: 168 VVPRFAAAIMIGVALTGVVCFVGFIASFLFNVYFQDGAPGSFVATFASFATTGDMIVALI 227

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           KA      + +V+ ++G +       +   V   VV+SI ++++++   +  Y  +
Sbjct: 228 KAVIFGAIVAVVSCQKGLSTVGGPTGVANSVNAAVVESILLLMVVNVAISQLYIML 283


>gi|183984957|ref|YP_001853248.1| membrane protein YrbE4A [Mycobacterium marinum M]
 gi|183178283|gb|ACC43393.1| conserved membrane protein YrbE4A [Mycobacterium marinum M]
          Length = 237

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 52/234 (22%), Positives = 95/234 (40%), Gaps = 4/234 (1%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
           + I          ++F+ FL     Q + V    +   +L+S     ++A      L + 
Sbjct: 1   MSIDTARAAFRRPFQFREFL----DQTWMVARVSLVPTLLVSIPFTVLVAFTLNILLREI 56

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           GA   S    +   + ++G ++T +++AG   +AI A++G+  I EEIDA+R +G+D ++
Sbjct: 57  GAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQ 116

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            L+ PR+ A  +   LL  L     + G          +    F +       L  +   
Sbjct: 117 RLVVPRVLASTVVALLLNGLVCAIGLSGGYAFSVFLQGVNPGAFINGLTVLTGLRELILA 176

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            IKA       G+V    G  V      +G  V   VV +   + +I+ +    
Sbjct: 177 EIKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVMTAI 230


>gi|145221253|ref|YP_001131931.1| hypothetical protein Mflv_0654 [Mycobacterium gilvum PYR-GCK]
 gi|315441852|ref|YP_004074731.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|145213739|gb|ABP43143.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
 gi|315260155|gb|ADT96896.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 269

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 54/243 (22%), Positives = 113/243 (46%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             I+G + + T +   +  K        + Q ++V    +   + +S     + +     
Sbjct: 25  LSIIGGLYAMTLDMFVAMVKPPFQWREFLLQTWFVARVSMVPALTLSIPLVVLTSFTFNT 84

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L +FGA  FS    ++  + +IG  +T +++AG   SA+ A++GS  I EE+DA+R +G
Sbjct: 85  LLGEFGAADFSGTGAALGAVNQIGPFVTVLVVAGAGASAMCADLGSRTIREEVDAMRVLG 144

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD +  L+ PR+ A  +   LL+ +   + ++GA +    +  +    F +       L 
Sbjct: 145 LDPIHSLVVPRVLATTLVAVLLSSVVTVTGLLGAFLFSVYFQHVTPGSFVASMTLITGLG 204

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           ++   L+KA       G++A  +G  V   +  +G  V+  VV +  ++ +++++     
Sbjct: 205 DVLVSLVKATLFGFVAGLIACYQGLRVQKGAAGVGNAVSETVVIAFLLLFVVNAIVTAVG 264

Query: 369 FAI 371
           F +
Sbjct: 265 FEV 267


>gi|294086102|ref|YP_003552862.1| hypothetical protein SAR116_2535 [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292665677|gb|ADE40778.1| Protein of unknown function DUF140 [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 266

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 74/258 (28%), Positives = 134/258 (51%), Gaps = 2/258 (0%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170
              IG  ++ F+  S   + I    I             +  L  ++  +   G+  +PV
Sbjct: 11  LTRIGMPVLNFVAFSGFISQIFATAILLLCSGFRRGQPVR--LRHVVSDIRSSGIDALPV 68

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           VIL++   G +++ QG   L  FGAE      +++   RE   L+T +++AGRSGS + +
Sbjct: 69  VILMAATIGIMLSIQGVHSLRIFGAESQVTFGLALSIPREFAPLITGIIVAGRSGSQLTS 128

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
            +GSM++N E+DA++ MG+  +R +++P + AL+ +LP+L  +AN SA   AS+ I    
Sbjct: 129 RVGSMQLNGELDALKVMGISPIRFVVAPALVALLFALPILVAIANVSAFWTASLYIDAVL 188

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
            I  A +++   +  T+ ++  G  KA   A  I ++ + +G  V   ++ LG   T+ V
Sbjct: 189 GIAPAAYWADILAVVTITDLIHGFGKAIIFAVLIALIGICKGLRVSGGADRLGAATTSSV 248

Query: 351 VQSISIVIIIDSLFAIFY 368
           V  I+ +I  D++FA+  
Sbjct: 249 VSCIAAIIAADAMFALIL 266


>gi|169628107|ref|YP_001701756.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169240074|emb|CAM61102.1| Putative YrbE family protein [Mycobacterium abscessus]
          Length = 285

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 58/236 (24%), Positives = 106/236 (44%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +     F    +         +RQ  +   + V  VIL++   G  ++ Q A    Q GA
Sbjct: 44  VRTIQWFFVDLFTGNFQWQEFVRQGAFQAGTAVVPVILVTLPIGVTLSIQFALLAGQVGA 103

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
              +     I  +R+   L+ A++++   GSAI A++GS  + EE DA+  MG+  +R L
Sbjct: 104 TSLAGAASGIAIIRQAASLVAALLMSAAVGSAITADLGSRTMREETDAMEVMGVSVIRRL 163

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PR  A I+    LT +  F   +GA +    + +     F + F + AT  ++   LI
Sbjct: 164 VVPRFAAAIMIGIALTGVVCFVGFLGAYLFNVYWQNGAPGSFVTTFSAFATPGDMILALI 223

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           KA      + +VA ++G +       +   V   VV+SI +++ ++   +  Y  +
Sbjct: 224 KAVIYGAIVAVVACQKGLSTKGGPIGVANSVNAAVVESILLLMTVNLAISQLYIMM 279


>gi|239982860|ref|ZP_04705384.1| ABC-transporter integral membrane protein [Streptomyces albus
           J1074]
 gi|291454703|ref|ZP_06594093.1| ABC-transporter integral membrane protein [Streptomyces albus
           J1074]
 gi|291357652|gb|EFE84554.1| ABC-transporter integral membrane protein [Streptomyces albus
           J1074]
          Length = 268

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 103/246 (41%), Gaps = 9/246 (3%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVIAQ 184
            +I       A     + +L  + R +  V             V V+I ++  TG V+  
Sbjct: 14  QLIFYVKALAAIPRTLRRYLKEVQRLLAEVAFGSGGLGVIGGTVGVMIAMTLFTGTVVGL 73

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L Q G   F+  + +    REI  L+  + ++   G+   A++G+M+INEE+DA+
Sbjct: 74  QGYAALDQIGTAAFTGFVSAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVDAL 133

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  +  L++ RI A ++++  L  +   S+ + +  +   +       +   F+  
Sbjct: 134 EGMGIRSMPYLVTTRIIAGVVAIIPLYAIGLLSSYVASRYITVFFNGQSRGTYDHYFNLF 193

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            +  ++   ++K    +  + +     GF        +G  V   V  +I ++ + D   
Sbjct: 194 LSPTDVLLSVLKVLIFSVLVILAHCYYGFRAQGGPAGVGVAVGRSVRNAIVLISVTDFFL 253

Query: 365 AIFYFA 370
           ++  + 
Sbjct: 254 SLALWG 259


>gi|15843113|ref|NP_338150.1| hypothetical protein MT3605 [Mycobacterium tuberculosis CDC1551]
 gi|13883459|gb|AAK47964.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
          Length = 237

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 51/234 (21%), Positives = 95/234 (40%), Gaps = 4/234 (1%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
           + +          ++F+ FL     Q + V    +   +L+S     ++A      L + 
Sbjct: 1   MSMDTARAAFRRPFQFREFL----DQTWMVARVSLVPTLLVSIPFTVLVAFTLNILLREI 56

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           GA   S    +   + ++G ++T +++AG   +AI A++G+  I EEIDA+R +G+D ++
Sbjct: 57  GAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQ 116

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            L+ PR+ A  +   LL  L     + G          +    F +       L  +   
Sbjct: 117 RLVVPRVLASTLVALLLNGLVCAIGLSGGYAFSVFLQGVNPGAFINGLTVLTGLRELILA 176

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            IKA       G+V    G  V      +G  V   VV +   + +I+ +    
Sbjct: 177 EIKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVMTAI 230


>gi|226361938|ref|YP_002779716.1| YrbE family protein [Rhodococcus opacus B4]
 gi|226240423|dbj|BAH50771.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 267

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 55/251 (21%), Positives = 102/251 (40%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
              K  +   +    +G      GE   +  K       L+ Q +++    +   +L++ 
Sbjct: 9   ATAKIASGVGTGLRAVGGFFELCGETFRAMAKRPFQWRELVLQSWFIVRVALLPTLLVAL 68

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
               ++       L +FGA   S     +  + +IG L+T +++AG   +AI A++G+  
Sbjct: 69  PFTVLVVFTLNILLVEFGAADLSGAGAGLGAVTQIGPLVTVLIVAGAGATAICADLGART 128

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           I EEIDAIR +G+D ++ L+ PR+ A +    LL  L     + G  +      ++    
Sbjct: 129 IREEIDAIRVLGIDPIQRLVVPRVLASMFVAVLLNGLVITIGLTGGFLFSVYIQNVTPGA 188

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           + S       L  +    +KA       G+VA   G  V     S+G  V   VV +   
Sbjct: 189 YVSSLTFVTGLPEVIISEVKATLFGLIAGLVACHRGLTVKGGPKSVGDAVNETVVYAFMA 248

Query: 357 VIIIDSLFAIF 367
           +  ++ +    
Sbjct: 249 LFAVNVVVTAI 259


>gi|239945574|ref|ZP_04697511.1| putative YrbE family protein [Streptomyces roseosporus NRRL 15998]
 gi|239992041|ref|ZP_04712705.1| putative YrbE family protein [Streptomyces roseosporus NRRL 11379]
 gi|291449029|ref|ZP_06588419.1| ABC-transporter integral membrane protein [Streptomyces roseosporus
           NRRL 15998]
 gi|291351976|gb|EFE78880.1| ABC-transporter integral membrane protein [Streptomyces roseosporus
           NRRL 15998]
          Length = 267

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 101/242 (41%), Gaps = 9/242 (3%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVIAQ 184
            +              + +L  + R +  V             + V+I ++  TG V+  
Sbjct: 13  QLTFYIRTLVWIPRTLRRYLREVQRLLAEVAFGSGGLGVIGGTIGVMIAMTLFTGTVVGL 72

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+Q G   F+  + +    REI  L+  + ++   G+   A++G+M+INEE+DA+
Sbjct: 73  QGYAALNQIGTSAFTGFVSAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVDAL 132

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  +  L++ RI A ++++  L  +   S+ + +  +   +       +   F+  
Sbjct: 133 EAMGIRSMPYLVTTRIIAGVVAIIPLYAIGLLSSYVASRWITIFFNGQSAGTYDHYFNLF 192

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            +  ++   ++K    +  + +     GF        +G  V   V  +I ++ + D   
Sbjct: 193 LSPQDVLLSVLKVLIFSVLVILAHCYYGFHATGGPAGVGVAVGRSVRNAIVLISVTDFFL 252

Query: 365 AI 366
           ++
Sbjct: 253 SL 254


>gi|126437566|ref|YP_001073257.1| hypothetical protein Mjls_5002 [Mycobacterium sp. JLS]
 gi|126237366|gb|ABO00767.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 254

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 50/243 (20%), Positives = 99/243 (40%), Gaps = 4/243 (1%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           + +    + + I    +     ++F+ FL     Q + +    +   +L++     ++A 
Sbjct: 9   ARAVGGFVDMSIDTFVKMFRRPFQFREFL----DQTWMIARVSLIPTLLVAIPFTVLVAF 64

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                L + GA   S    +   + ++G ++T +++AG   +AI A++G+  I EEIDA+
Sbjct: 65  TLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAM 124

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R +G+D ++ L+ PR+ A      LL  L     + G  +       +    F +     
Sbjct: 125 RVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGLAGGYVFSVFLQGVNPGAFINGLTVL 184

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L  +    IKA       G+V    G  V      +G  V   VV +   + +I+ + 
Sbjct: 185 TGLGELVLAEIKALLFGVVAGLVGCYRGLTVQGGPKGVGIAVNETVVYAFICLFVINVIM 244

Query: 365 AIF 367
              
Sbjct: 245 TAV 247


>gi|182434832|ref|YP_001822551.1| putative YrbE family protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326775350|ref|ZP_08234615.1| protein of unknown function DUF140 [Streptomyces cf. griseus
           XylebKG-1]
 gi|178463348|dbj|BAG17868.1| putative YrbE family protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326655683|gb|EGE40529.1| protein of unknown function DUF140 [Streptomyces cf. griseus
           XylebKG-1]
          Length = 267

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 101/242 (41%), Gaps = 9/242 (3%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVIAQ 184
            +              + +L  + R +  V             + V++ ++  TG V+  
Sbjct: 13  QLTFYVKALVWIPRTLRRYLREVQRLLAEVAFGSGGLGVIGGTIGVMVAMTLFTGTVVGL 72

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+Q G   F+  + +    REI  L+  + ++   G+   A++G+M+INEE+DA+
Sbjct: 73  QGYAALNQIGTSAFTGFISAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVDAL 132

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  +  L++ RI A ++++  L  +   S+ + +  +   +       +   F+  
Sbjct: 133 EAMGIRSMPYLVTTRIIAGVVAIIPLYAIGLLSSYVASRWITIFFNGQSAGTYDHYFNLF 192

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            +  ++   ++K    +  + +     GF        +G  V   V  +I ++ + D   
Sbjct: 193 LSPQDVLLSVLKVLIFSVLVILAHCYYGFHATGGPAGVGVAVGRSVRNAIVLISVTDFFL 252

Query: 365 AI 366
           ++
Sbjct: 253 SL 254


>gi|119717050|ref|YP_924015.1| hypothetical protein Noca_2826 [Nocardioides sp. JS614]
 gi|119537711|gb|ABL82328.1| protein of unknown function DUF140 [Nocardioides sp. JS614]
          Length = 257

 Score =  174 bits (441), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 60/239 (25%), Positives = 110/239 (46%)

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G +     E     +     L   + Q +++    +   IL+S   GAVI+ Q      Q
Sbjct: 13  GEIAVMVVEVTKRMFTRPFQLREFVEQAWFITSVTLMPTILVSIPFGAVISLQVGNLTGQ 72

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
            GA+ F+     +  +RE   +  A++IAG +GSAI +++G+ KI EEIDA+  +G+D +
Sbjct: 73  LGAQSFAGATAVLAVVREAAPIAAALIIAGAAGSAICSDMGARKIREEIDAMEVLGVDPL 132

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
             LI PR+ A +    ++  +   + I G               F S F + A+L +++ 
Sbjct: 133 ERLIVPRVVATMFVALMINGIVIGAGIGGGYFFTVIVQGGSAGAFLSSFTALASLPDLYI 192

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
            +IKA        IV   +G   G   + +G+ V   V+ +  ++  ++++    YF +
Sbjct: 193 SMIKAVVFGWLAAIVGSYKGLNAGGGPSGVGRAVNESVIVAFMLLFFLNAVITAIYFQV 251


>gi|294632698|ref|ZP_06711257.1| ABC-transporter integral membrane protein [Streptomyces sp. e14]
 gi|292830479|gb|EFF88829.1| ABC-transporter integral membrane protein [Streptomyces sp. e14]
          Length = 268

 Score =  174 bits (441), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 47/246 (19%), Positives = 102/246 (41%), Gaps = 9/246 (3%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP---------VVILISFVTGAVIAQ 184
            +I             + +L  + R +  V               V+I ++  TG V+  
Sbjct: 14  RMIFYVRAVFWVPRTLRRYLKEVRRLLAEVAFGTGGLGVIGGTIGVMIGMTLFTGTVVGL 73

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L Q G   F+  + +    REI  L++ + ++   G+   A++G+M+INEE+DA+
Sbjct: 74  QGYAALDQIGTAAFTGFVSAYFNTREIAPLVSGLALSATVGAGFTAQLGAMRINEEVDAL 133

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  +  L++ RI A ++++  L  +   S+ + +  V   +       +   F+  
Sbjct: 134 EAMGIRSLPYLVTTRIIAGVVAIVPLYAIGLLSSYLASRAVTVMFQGQSRGTYDHYFNLF 193

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            +  ++   ++K    +  + I     G+        +G  V   V  +I ++ + D   
Sbjct: 194 LSPTDVLLSVLKVLIFSVIVIIAHCYHGYHAHGGPAGVGVAVGRSVRNAIVLIALTDFFL 253

Query: 365 AIFYFA 370
           ++  + 
Sbjct: 254 SLALWG 259


>gi|326333295|ref|ZP_08199542.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
 gi|325948939|gb|EGD41032.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
          Length = 267

 Score =  173 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 50/254 (19%), Positives = 107/254 (42%), Gaps = 11/254 (4%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV----VILIS 175
             + +   Q        S+        ++++  ++ L+ ++  +G   + +    V++I 
Sbjct: 6   SALRELGEQLAFHARAYSHVPHAF---HRYRKEVVRLLAEVA-MGTGALALIGGTVLVIG 61

Query: 176 FVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
           F+T   G  +  Q        G    S    +    RE+  ++  + +    G+   A+I
Sbjct: 62  FLTAASGIEVGLQAYTSFDNIGVSALSGFFSAYFNTREVAPIIAGIALTATVGAGFTAQI 121

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           G+M+++EEIDA+  M +  V  L++ RI A +I++  L  +A     +   +V+   YD 
Sbjct: 122 GAMRVSEEIDALEVMAVPPVPYLVTTRIMAGLIAVIPLYAIAVMMCWLATRLVVTVGYDE 181

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
               +   F +     ++F  ++K   MA  +  V    GF        +G+ V   V  
Sbjct: 182 APGTYQHYFDTFLIPGDLFLSMLKVTIMALVVVSVCCYHGFKAAGGPAGVGRAVGRAVRS 241

Query: 353 SISIVIIIDSLFAI 366
           ++  ++ +D +F I
Sbjct: 242 ALIAIMFVDLIFGI 255


>gi|240168187|ref|ZP_04746846.1| integral membrane protein YrbE1A [Mycobacterium kansasii ATCC
           12478]
          Length = 268

 Score =  173 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 50/238 (21%), Positives = 101/238 (42%), Gaps = 4/238 (1%)

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
               + +          ++++ F+L    Q +++    +   IL+S     ++       
Sbjct: 27  GFFRMCVLTGKALFRRPFQWREFIL----QCWFIMRVALLPAILVSVPFTVLLIFTLNVL 82

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L+QFGA   S    +I  + ++G  +T +++AG   +AI A++G+  I EEIDA+  +G+
Sbjct: 83  LAQFGAADLSGAGAAIGAVTQLGPQVTVLVVAGAGSTAICADLGARTIREEIDAMEVLGI 142

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
           D +  L+ PR+ A  +   LL  L     ++G  +      ++    + +   +   L  
Sbjct: 143 DPIHRLVVPRVIAATLIATLLNALVITVGLVGGYLFGVYLQNVSGGAYLATLTTITGLPE 202

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           +   ++KA       G+V    G  V   S  LG  V   VV  +  +  ++ +    
Sbjct: 203 VVIAMVKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVVALFAVNVVLTTV 260


>gi|297190650|ref|ZP_06908048.1| ABC-transporter integral membrane protein [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|197719877|gb|EDY63785.1| ABC-transporter integral membrane protein [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 267

 Score =  173 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 47/242 (19%), Positives = 101/242 (41%), Gaps = 9/242 (3%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVIAQ 184
            +I             + +L  + R +  V             + V+I ++  TG V+  
Sbjct: 13  QLIFYVRALLWIPKTLRRYLREVQRLLAEVAFGSGGLGVIGGTIGVMIAMTLFTGTVVGL 72

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+Q G   F+  + +    REI  L+  + ++   G+   A++G+M+INEE+DA+
Sbjct: 73  QGYAALNQIGTSAFTGFISAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVDAL 132

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  +  L++ RI A ++++  L  +   S+ + +  V   +       +   F   
Sbjct: 133 EAMGVRSMPYLVTTRIIAGVVAIVPLYAIGLLSSYLASRWVTVLFNGQSAGTYDHYFALF 192

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            +  ++   ++K    +  + +     GF        +G  V   V  +I ++ + D   
Sbjct: 193 LSPDDVLLSILKVLIFSVMVILAHCYHGFRASGGPAGVGVAVGRSVRNAIVLISVTDFFL 252

Query: 365 AI 366
           ++
Sbjct: 253 SL 254


>gi|332043098|gb|EGI79296.1| protein of unknown function DUF140 [Lacinutrix algicola 5H-3-7-4]
          Length = 245

 Score =  173 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 97/243 (39%), Gaps = 2/243 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
            H +G       E      K+      +++ +  + +  + +V  I+F  G VI  Q A 
Sbjct: 4   LHNIGSYFLMIVEMFRKPTKWSVMKQLILKDIDDLIIGSLGIVAFIAFFVGGVITIQTAL 63

Query: 189 QLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +       +          + E      ++++AG+ GS I + IG+M++ E+IDA+  M
Sbjct: 64  NIDNPLIPKYLVGFATRQSIILEFAPTFISIIMAGKVGSFITSSIGTMRVTEQIDALEVM 123

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++ +  L+ P+  A+++  P +  +A F  I G               F +        
Sbjct: 124 GINSINYLVFPKFVAMML-YPFVISIAMFLGIFGGLTACVLGGYSSVEDFITGVQIDLIP 182

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            ++    IK    A  +  +    G+ +   +  +G+  TT  V +   +I+++ L    
Sbjct: 183 FHVAYAFIKTIIFAFILATIPSYHGYFMKGGALEVGEASTTSFVWTSVAIILLNYLLTQM 242

Query: 368 YFA 370
             +
Sbjct: 243 LLS 245


>gi|319950491|ref|ZP_08024404.1| putative YrbE family protein [Dietzia cinnamea P4]
 gi|319435850|gb|EFV91057.1| putative YrbE family protein [Dietzia cinnamea P4]
          Length = 262

 Score =  173 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 106/252 (42%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                  +     G V     +     ++        I Q +++    +    L++   G
Sbjct: 5   DVGGGFRTAVGGAGEVFRLFLDVLRGVFRRPFQFREFIEQSWFIASVTILPSALVAIPFG 64

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           AV+A Q    + Q GAE F+     +  +++   L+T+++IAG +GSA+ A++G+  I E
Sbjct: 65  AVVAMQTGSLVQQLGAEAFTGATGVLAVVQQGAPLVTSLLIAGAAGSAVAADLGARTIRE 124

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DA+R +G+D ++ L+ PR+  +++   LL  L +   I G  +            +  
Sbjct: 125 ELDAMRVLGIDPIQRLVVPRVLGMMLVAVLLNGLVSIVGISGGYVFNIMLQGGTPGAYLM 184

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
            F + A L +     IKA       G+VA   G         +G  V   VV +  ++  
Sbjct: 185 SFGALAQLPDFIMSSIKALIFGLIAGVVASYCGMNPKGGPKGVGDAVNLGVVLTFLLLFF 244

Query: 360 IDSLFAIFYFAI 371
            + +    Y  I
Sbjct: 245 ANLILTAMYLQI 256


>gi|296167380|ref|ZP_06849782.1| integral membrane protein YrbE1A [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295897324|gb|EFG76928.1| integral membrane protein YrbE1A [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 271

 Score =  173 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 100/245 (40%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +   +   ++G           + +++       + Q +++        I++S     ++
Sbjct: 19  DQLQTPLTVIGGFFRMCVLTGRALFRWPFQWREFVLQCWFIMRVAFLPTIMVSIPLTVLL 78

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
                  L+QFGA   S    +I  + ++G L T +++AG   +AI A++G+  I EEID
Sbjct: 79  IFTLNVLLAQFGAADLSGAGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEID 138

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +G+D +  L+ PR+ A  +   LL  L     ++G  +      ++    + +   
Sbjct: 139 AMEVLGIDPIHRLVVPRVIAATLVATLLNGLVITVGLVGGYLFGVYLQNVSGGAYLATLT 198

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           +   L  +    +KA       G+V    G  V   S  LG  V   VV  +  +  ++ 
Sbjct: 199 TITGLPEVVIATVKAAIFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVVALYAVNV 258

Query: 363 LFAIF 367
           +    
Sbjct: 259 VLTTI 263


>gi|254392559|ref|ZP_05007737.1| ABC-transporter integral membrane protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294816013|ref|ZP_06774656.1| ABC-transporter integral membrane protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|326444355|ref|ZP_08219089.1| putative YrbE family protein [Streptomyces clavuligerus ATCC 27064]
 gi|197706224|gb|EDY52036.1| ABC-transporter integral membrane protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294328612|gb|EFG10255.1| ABC-transporter integral membrane protein [Streptomyces
           clavuligerus ATCC 27064]
          Length = 267

 Score =  173 bits (439), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 104/241 (43%), Gaps = 6/241 (2%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS------GVPVVILISFVTGAVIAQQ 185
           L   +        + +++   +  L+ ++ +           + V++ ++  TG V+  Q
Sbjct: 14  LAFYLRALLWIPRTLHRYLREVQRLLAEVAFGSGGLGVIGGTIGVMVAMTLFTGTVVGLQ 73

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           G   L+Q G   F+  + +    REI  L+  + ++   G+   A++G+M+INEE+DA+ 
Sbjct: 74  GYAALNQIGTSAFTGFVSAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVDALE 133

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MG+  +  L++ RI A ++++  L  +   S+ + +  +   +       +   F    
Sbjct: 134 AMGVRSLPYLVTTRIIAGVVAIIPLYAIGLLSSYLASRWITVVFNGQSTGTYDHYFQLFL 193

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           +  ++   ++K    +  + +     GF        +G  V   V  +I ++ + D   +
Sbjct: 194 SPDDVLLSILKVLIFSVMVILAHCYYGFRAEGGPAGVGVAVGRSVRNAIVLISVTDFFLS 253

Query: 366 I 366
           +
Sbjct: 254 L 254


>gi|302525040|ref|ZP_07277382.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4]
 gi|302433935|gb|EFL05751.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4]
          Length = 272

 Score =  173 bits (439), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 49/259 (18%), Positives = 104/259 (40%), Gaps = 10/259 (3%)

Query: 118 IVKFINDSCSQAHILG-LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG--------- 167
           +++ I+        LG  ++             + +L  ++R +  V             
Sbjct: 1   MLEAIDRRLGFLDTLGDQILFFLRALGWVPRAVRRYLREIVRLLAEVSFGSGALAVIGGT 60

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           + V++ ++  TG V+  QG   L+Q G   F+  + +    REI  L+  + ++   G  
Sbjct: 61  IGVMVGMTVATGTVVGLQGYSALNQVGTSAFAGFISAYFNTREIAPLVAGLALSATVGCG 120

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
             A++G+M+I+EEIDA+  MG+  V  L++ R+ A  I++  L  +   S+ + +  V  
Sbjct: 121 FTAQLGAMRISEEIDALEVMGIPSVPYLVTTRVIAGFIAVIPLYAVGLLSSYLASRQVTV 180

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
             +      +   F       ++     K    +  + +     GF        +G  V 
Sbjct: 181 WGFGQSAGTYDHYFLLFLPPGDVLWSFGKVLIFSVVVVLAHCYYGFRASGGPAGVGVAVG 240

Query: 348 TCVVQSISIVIIIDSLFAI 366
             V  +I  + ++D   ++
Sbjct: 241 RAVRTAIVAISVLDFFLSL 259


>gi|226304401|ref|YP_002764359.1| YrbE family protein [Rhodococcus erythropolis PR4]
 gi|226183516|dbj|BAH31620.1| putative YrbE family protein [Rhodococcus erythropolis PR4]
          Length = 269

 Score =  173 bits (439), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 57/247 (23%), Positives = 110/247 (44%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           +    +++G  +        +  + +  L   + Q  ++G       +L+    G  IA 
Sbjct: 16  ALQGGYLIGFSVQALFGLFTAILRRRLSLHETVTQTLFIGRVSTGPSLLLMIPIGVFIAV 75

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                  + GA  +S  +++ + + +   L+ A+M+AG +GSAI  ++GS KI EEIDA+
Sbjct: 76  SVGELAGRIGAGGYSGAVVAFIIVGQAAALVCALMMAGVAGSAICTDLGSRKIREEIDAM 135

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+D +  L++PR+ A +I    L  +  F  +I   +       +P   F + F   
Sbjct: 136 EVMGIDVIERLVAPRLVAAVIVSLALCSMVTFGGVIACYLYHIYVQHLPAGTFMATFSQY 195

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
              ++    L+KA     A  +VA  +G         +   V   VV + ++V I++++ 
Sbjct: 196 GRSSDFVMALVKAAIFGLASTLVATFKGLHAKGGPRGVADAVNEAVVIAFALVFIVNTVL 255

Query: 365 AIFYFAI 371
           +  Y  I
Sbjct: 256 SALYTVI 262


>gi|254822745|ref|ZP_05227746.1| hypothetical protein MintA_22639 [Mycobacterium intracellulare ATCC
           13950]
          Length = 237

 Score =  173 bits (438), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 46/224 (20%), Positives = 93/224 (41%)

Query: 144 ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203
            ++++        + Q + +    +   +L+S     ++A      L + GA   S    
Sbjct: 7   RAAFRRPFQFGEFLDQTWMIARVSLVPTLLVSIPFTVLVAFTLNILLREIGAADLSGAGT 66

Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263
           +   + ++G ++T +++AG   +AI A++G+  I EEIDA+R +G+D ++ L+ PR+ A 
Sbjct: 67  AFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLAS 126

Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323
            +   LL  L     + G  +       +    F +       L  +    +KA      
Sbjct: 127 TVVALLLNGLVCAIGLSGGYVFSVFLQGVNPGAFINGLTVLTGLRELVLAEVKALLFGVM 186

Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            G+V    G  V      +G  V   VV +   + +I+ +    
Sbjct: 187 AGMVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVMTAI 230


>gi|291298383|ref|YP_003509661.1| hypothetical protein Snas_0857 [Stackebrandtia nassauensis DSM
           44728]
 gi|290567603|gb|ADD40568.1| protein of unknown function DUF140 [Stackebrandtia nassauensis DSM
           44728]
          Length = 262

 Score =  173 bits (438), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 104/248 (41%), Gaps = 6/248 (2%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVILISFVT 178
             S    L   +        +  +++  +  L+ ++ +      V    V VV+ ++F T
Sbjct: 2   LTSLGTQLQFYVRAIAWMPKAVVRYRKEVARLLGEVSFGAGGLTVVGGTVGVVVFLTFFT 61

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G  +  QG   L+Q G   F+  + +    REI  L+  + ++   G+   A++G+M++N
Sbjct: 62  GTEVGLQGYQALNQVGTSAFTGFISAYFNTREIAPLVAGIALSATVGAGFTAQLGAMRVN 121

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE+DA+  MG+  +  L++ R+ A + +   L +LA  S+ +    V   Y+      + 
Sbjct: 122 EEVDALEVMGVRSLPYLVTTRMLAGLAACVPLYVLALLSSYVATRGVAIFYFGQSSGTYD 181

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
             F +     ++     K    +  +  V    G+        +G  V   V  +I  V 
Sbjct: 182 HYFSTFLVPGDVLWSFGKVLCFSVIVIGVHCYYGYHASGGPAGVGVAVGRAVRTAIVAVN 241

Query: 359 IIDSLFAI 366
           I+D   ++
Sbjct: 242 IVDFFVSL 249


>gi|183980441|ref|YP_001848732.1| integral membrane protein YrbE1A [Mycobacterium marinum M]
 gi|183173767|gb|ACC38877.1| conserved hypothetical integral membrane protein YrbE1A
           [Mycobacterium marinum M]
          Length = 267

 Score =  173 bits (438), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 54/254 (21%), Positives = 105/254 (41%), Gaps = 1/254 (0%)

Query: 115 GKKIVKFINDSCSQ-AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           G  ++ ++ D       ++G           + ++       LI Q ++V    +   I+
Sbjct: 6   GPHLMGYLRDQLETPLTMVGGFFRMCVLTGKALFRRPFQWRELILQCWFVMRVALLPTIM 65

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           +S     ++       L+QFGA   S    +I  + ++G L T +++AG   +AI A++G
Sbjct: 66  VSIPLTVLLIFTLNVLLAQFGAADISGAGAAIGAVTQLGPLTTVLVVAGAGSTAICADLG 125

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           +  I EEIDA+  +G+D +  L+ PR+ A      LL  L     ++G  +      +I 
Sbjct: 126 ARTIREEIDAMEVLGIDPIHRLVVPRVIAATFVATLLNALVITVGLVGGYLFGVYLQNIN 185

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              + +   +   +  +   ++KA       G+V    G  V   S  LG  V   VV  
Sbjct: 186 GGAYLATLTTITGMPEVTIAMVKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLC 245

Query: 354 ISIVIIIDSLFAIF 367
           +  +  ++ +    
Sbjct: 246 VVALYAVNVILTTI 259


>gi|325954854|ref|YP_004238514.1| hypothetical protein Weevi_1232 [Weeksella virosa DSM 16922]
 gi|323437472|gb|ADX67936.1| protein of unknown function DUF140 [Weeksella virosa DSM 16922]
          Length = 250

 Score =  173 bits (438), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 3/226 (1%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  +    +      KFK F   +IR++  +G+S + +V  IS   GAV+A Q A    
Sbjct: 9   LGRYVLLMTKVFQKPIKFKYFWKLIIREVMDLGMSSLGIVTFISTFMGAVVAIQMAQNFR 68

Query: 192 Q---FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
                  + +      ++ + E    + ++++AG+ GS I + IG+M++ E+IDA+  MG
Sbjct: 69  GSEIPVPDAYIGYATKVVLVLEFSPTIVSLILAGKVGSYIASSIGTMRVTEQIDALDVMG 128

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++    LI P+I A +   P L  ++    I+G  ++           F         L 
Sbjct: 129 INSPNFLILPKIIACVFFFPFLIAISIGFGILGGHLIGVFTKMWAPVDFVQGLQMGMALK 188

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
                  K    A  I  V    G+ V   S  +G+  TT VV + 
Sbjct: 189 FYIYTFFKTMVFAFVIATVPAYYGYYVSGGSLEVGRSSTTAVVWTS 234


>gi|169631675|ref|YP_001705324.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169243642|emb|CAM64670.1| Putative YrbE family protein [Mycobacterium abscessus]
          Length = 288

 Score =  173 bits (438), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 63/275 (22%), Positives = 118/275 (42%), Gaps = 5/275 (1%)

Query: 95  NQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGE-FCASSYKFKGFL 153
             +P           L  ++ K  V+ +  + SQ  +    +          ++ ++ F 
Sbjct: 9   PARPATPSRDAVSGALKEYVRKHPVQAVETAGSQIVLGVRAMQYMFSDIVHRAFPWREF- 67

Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
              I Q  ++  S V   +L++   G  ++ Q A    Q GA   +     +  +R+   
Sbjct: 68  ---IHQGAFMAGSAVVPTLLVAIPIGVTLSIQFALLAGQVGASSLAGAASGVAIVRQGAS 124

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           L+ AV++A   GSAI A++GS  + EEIDA+  MG+  +R L+ PR+ A ++    LT  
Sbjct: 125 LVAAVLMASAVGSAITADLGSRTMREEIDAMEVMGVSVIRRLVVPRVAAAVLVGVGLTGT 184

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
             F   + + +    +       F + F S   + ++   L+KA      + IVA  +G 
Sbjct: 185 TCFVGFLASYLFNVYFQHGAPGSFVATFASFTRVDDLVLALLKAILYGLIVAIVACDKGL 244

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
                   +   V   VV+SI ++++I+ L +  Y
Sbjct: 245 TTKGGPAGVANSVNAAVVESILVLMLINVLVSQVY 279


>gi|169631592|ref|YP_001705241.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169243559|emb|CAM64587.1| Putative YrbE family protein [Mycobacterium abscessus]
          Length = 285

 Score =  173 bits (438), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 59/236 (25%), Positives = 107/236 (45%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +     F    +  +      +RQ  +   + V  VIL++   G  ++ Q A    Q GA
Sbjct: 44  VRTLQWFFVDLFTGQFQWQEFVRQGAFQAATAVMPVILVTLPIGVTLSIQFALLAGQVGA 103

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
              +     I  +R+   L+ AV++A   GSAI A++GS  + EE DA+  MG+  +R L
Sbjct: 104 TSLAGAASGIAIIRQAASLVAAVLMASAVGSAITADLGSRTMREETDAMEVMGVSVIRRL 163

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PR  A I+    LT +  F   +GA +    +       F S F S AT  ++   ++
Sbjct: 164 VVPRFAAAIMIAVALTAVVCFVGFLGAYLFNVYWQGGAPGSFVSTFASFATPDDMVLAVL 223

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           KA      + +V+ ++G +       +   V   VV+SI ++++++   +  Y  +
Sbjct: 224 KAIIYGAIVAVVSCQKGLSTKGGPIGVANSVNAAVVESILLLMVVNVAISQLYIMM 279


>gi|229494168|ref|ZP_04387931.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
 gi|229318530|gb|EEN84388.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
          Length = 269

 Score =  173 bits (438), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 57/247 (23%), Positives = 110/247 (44%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           +    +++G  +        +  + +  L   + Q  ++G       +L+    G  IA 
Sbjct: 16  ALQGGYLIGFSVQALFGLFTAILRRRLSLHETVTQTLFIGRVSTGPSLLLMIPIGVFIAV 75

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                  + GA  +S  +++ + + +   L+ A+M+AG +GSAI  ++GS KI EEIDA+
Sbjct: 76  SVGELAGRIGAGGYSGAVVAFIIVGQAAALVCALMMAGVAGSAICTDLGSRKIREEIDAM 135

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+D +  L++PR+ A +I    L  +  F  +I   +       +P   F + F   
Sbjct: 136 EVMGIDVIERLVAPRLVAAVIVSLALCSMVTFGGVIACYLYHIYVQHLPAGTFMATFSQY 195

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
              ++    L+KA     A  +VA  +G         +   V   VV + ++V I++++ 
Sbjct: 196 GRSSDFVMALVKAAVFGIASTLVATFKGLHAKGGPRGVADAVNEAVVIAFALVFIVNTVL 255

Query: 365 AIFYFAI 371
           +  Y  I
Sbjct: 256 SALYTVI 262


>gi|118616793|ref|YP_905125.1| integral membrane protein YrbE1A [Mycobacterium ulcerans Agy99]
 gi|118568903|gb|ABL03654.1| conserved hypothetical integral membrane protein YrbE1A
           [Mycobacterium ulcerans Agy99]
          Length = 267

 Score =  173 bits (438), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 52/245 (21%), Positives = 101/245 (41%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +   +   ++G           + ++       LI Q ++V    +   I++S     ++
Sbjct: 15  DQLETSLTMVGGFFRMCVLTGKALFRRPFQWRELILQCWFVMRVALLPTIMVSIPLTVLL 74

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
                  L+QFGA   S    +I  + ++G L T +++AG   +AI A++G+  I EEID
Sbjct: 75  IFTLNVLLAQFGAADISGAGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEID 134

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +G+D +  L+ PR+ A      LL  L     ++G  +      +I    + +   
Sbjct: 135 AMEVLGIDPIHRLVVPRVIAATFVATLLNALVITVGLVGGYLFGVYLQNINGGAYLATLT 194

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           +   +  +   ++KA       G+V    G  V   S  LG  V   VV  +  +  ++ 
Sbjct: 195 TITGMPEVTIAMVKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVVALYAVNV 254

Query: 363 LFAIF 367
           +    
Sbjct: 255 ILTTI 259


>gi|42525131|ref|NP_970511.1| ABC-type organic solvent resistance transporter, permease protein.
           [Bdellovibrio bacteriovorus HD100]
 gi|39577342|emb|CAE81165.1| ABC-type organic solvent resistance transporter, permease protein
           [Bdellovibrio bacteriovorus HD100]
          Length = 259

 Score =  173 bits (438), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 56/243 (23%), Positives = 112/243 (46%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             S    +G  +        +    K     +  Q++ V V   P   +  F  GA++  
Sbjct: 4   ITSLLDQMGATLLFLQRILRTMIFKKLKTHEIFEQIWKVTVDSFPTTAMAGFFVGAIMTV 63

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q A Q+ +FGA  +   L +    RE+G LL A M++G+ G+   AE+G+MK+ E+IDA+
Sbjct: 64  QFAMQVKEFGALGYLGALATSATFREVGPLLIAFMLSGKVGAFTSAELGTMKVTEQIDAV 123

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R +G D ++ +I PR   +I+S   L       ++ G  ++   +  + +  +       
Sbjct: 124 RCLGADPIQEIIVPRFVGIIVSSFFLLAAGLMMSVFGGMLLGELFAGVNYEEYLRHVPLI 183

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            +  +I +GL+K    A  +  +   +G+A    +  +G+ V    V ++  ++++D + 
Sbjct: 184 VSPVSILSGLVKCGTFAVVLATICTYQGYATTGGAKGVGRAVVATAVTTMICIVVMDWMT 243

Query: 365 AIF 367
           +  
Sbjct: 244 SFI 246


>gi|239931479|ref|ZP_04688432.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis
           ATCC 14672]
 gi|291439855|ref|ZP_06579245.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis
           ATCC 14672]
 gi|291342750|gb|EFE69706.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis
           ATCC 14672]
          Length = 268

 Score =  173 bits (438), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 101/245 (41%), Gaps = 9/245 (3%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVIAQQ 185
           ++             + +L  + R +  V             + V+I ++  TG V+  Q
Sbjct: 15  LLFYARALLWIPRTLRRYLKEVQRLLAEVAFGSGGLGVIGGTIGVMIAMTLFTGTVVGLQ 74

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           G   L Q G   F+  + +    REI  L+  + ++   G+   A++G+M+INEE+DA+ 
Sbjct: 75  GYAALDQIGTAAFTGFVSAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVDALE 134

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MG+  +  L++ RI A ++++  L  +   S+ + +  V   +       +   F    
Sbjct: 135 GMGIRSMPYLVTTRIIAGVVAIVPLYAIGLLSSYLASRSVTVLFNGQSRGTYDHYFALFL 194

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           +  ++   ++K    +  + +     G+        +G  V   V  +I ++ + D   +
Sbjct: 195 SPTDVLLSVLKVLIFSVMVILAHCYYGYRATGGPAGVGVAVGRSVRNAIVLISVTDFFLS 254

Query: 366 IFYFA 370
           +  + 
Sbjct: 255 LALWG 259


>gi|30468225|ref|NP_849112.1| ORF251 [Cyanidioschyzon merolae strain 10D]
 gi|30409325|dbj|BAC76274.1| ycxr [Cyanidioschyzon merolae strain 10D]
          Length = 251

 Score =  172 bits (437), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 105/240 (43%), Gaps = 1/240 (0%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                 +  ++    +     + ++ + L +  Q+ ++    + +  + S   G V+  Q
Sbjct: 1   MQMISSILSILRFQAQIIVHLFHWR-YPLMIKWQIAWIAEQSLSLCWIHSCFLGMVLCLQ 59

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            A +L    A      ++ +  LRE+  + TA+++  R  S+  +E+ SM ++E+ DA+ 
Sbjct: 60  LAKELISLQATPMIGAILGLTLLRELSPVFTAILLTARVASSYTSELASMCVSEQFDALY 119

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            +     ++ I PR  A +I LPL T     +++  +  +    Y IP  +F +   S+ 
Sbjct: 120 LLQTHPFQLHIIPRYLACLIMLPLCTWFCFLTSLSASLFLACLAYGIPVNLFLTSLRSSL 179

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           +L +I T L+KA      + +++          S  +    T  VV  + +++  D L +
Sbjct: 180 SLWDILTSLLKAMIFGALLALISCHYALITRGGSKQIAISTTRAVVHVLVLILAFDWLLS 239


>gi|296138972|ref|YP_003646215.1| hypothetical protein Tpau_1245 [Tsukamurella paurometabola DSM
           20162]
 gi|296027106|gb|ADG77876.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM
           20162]
          Length = 287

 Score =  172 bits (437), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 63/274 (22%), Positives = 116/274 (42%), Gaps = 4/274 (1%)

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLI-- 157
           R      F NL    GK    F +        +  VI               ++L+ I  
Sbjct: 6   RPRGTRWFYNLFGSSGKAWTGF-DSLGHVVSFIAEVIRTVPHAIKHYRSQIMYILTDITW 64

Query: 158 -RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
            R    VG    PV+ ++    GA++A QG   L+  G    +    S    RE   LL 
Sbjct: 65  GRGALVVGGGTAPVLAVLGITVGAIVAVQGFAILNMLGMGPLTAVAASFANTREFAPLLA 124

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
            V  A ++G  + AEIG+M+INEEIDA+ ++GL  V  +++ R+ A +I++  + ++   
Sbjct: 125 GVGFAAQAGCRMTAEIGAMRINEEIDALESLGLRSVSFVVTTRVLAGLIAVIPVYLITLI 184

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            + +  + ++   Y +P   +   F    + ++I   +IK      A+ I+   +GF   
Sbjct: 185 LSWLSCAWMVTSVYGMPTGTYQHYFSQFVSASDIIFSVIKVAVFLVAVIIIHCYQGFFAS 244

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                +G      +  S+  V+I++ +  +  + 
Sbjct: 245 GGPEGVGTASGRAIRASLVAVVILNLVMTVALWG 278


>gi|41406855|ref|NP_959691.1| hypothetical protein MAP0757 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41395205|gb|AAS03074.1| hypothetical protein MAP_0757 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 260

 Score =  172 bits (437), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 107/251 (42%), Gaps = 1/251 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
            ++   D       +G + + + +     ++        + Q ++V    +   +L++  
Sbjct: 3   ALRLKVDMSGAMQAVGALFAMSADAVKYLFRRPFQWREFLEQSWFVARVSLAPTLLVAIP 62

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
              +++      L + GA   S    +   + ++G L+T +++AG   +A+ A++GS  I
Sbjct: 63  FTVLVSFTLNILLRELGAADLSGAGAAFGAVTQLGPLVTVLIVAGAGATAMCADLGSRTI 122

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EEIDA+  +G++ ++ L++PR+ A  +   LL  L     ++G  +      D+    F
Sbjct: 123 REEIDAMEVLGINPIQRLVTPRMLASGLVAFLLNSLVVIIGVLGGYVFSVFVQDVNPGAF 182

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISI 356
            +       +  +    IKA       G+VA   G +  G  + ++G  V   VV +   
Sbjct: 183 AAGITLLTGVPEVVISCIKAALFGLIAGLVACYRGLSITGGGAKAVGNAVNETVVYAFMS 242

Query: 357 VIIIDSLFAIF 367
           + +++ +    
Sbjct: 243 LFVVNVVVTAI 253


>gi|162451969|ref|YP_001614336.1| putative ABC transport system permease protein [Sorangium
           cellulosum 'So ce 56']
 gi|161162551|emb|CAN93856.1| putative ABC transport system permease protein [Sorangium
           cellulosum 'So ce 56']
          Length = 285

 Score =  172 bits (437), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 57/283 (20%), Positives = 109/283 (38%), Gaps = 10/283 (3%)

Query: 90  RKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKF 149
            +                 +    IG   +     +     +    +           K 
Sbjct: 10  DRPSAGPPSSELRDLAPEASGVAAIGAAALSLFQSARELYSVFVRTLYYCA-------KG 62

Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE-IFSIDLMSILQL 208
           +    ++++QMY +G   +  + ++    G ++  Q   Q  +   +          L +
Sbjct: 63  RREPGAVLQQMYEIGNKSLFFLTVVMGFIGMIMVFQAGQQAKRVIPDLTMLGATYLELLV 122

Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268
           R++   + A+M+A R G+ I AEIGSM + E++DA+R    D +  LI PR  A ++   
Sbjct: 123 RDLAASIAALMLATRVGAGIAAEIGSMVVTEQVDALRMCAADPIDYLIKPRFIASLLMTT 182

Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328
            L + +   +     +  +  +D+    F +   S     ++ TGL K      AI +V+
Sbjct: 183 CLIVWSAAVSFTTGMVTAYSMFDVSPETFMN--VSLVDAGDLATGLAKCVAYGAAIPVVS 240

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
              G +    S  +G   T  VV S   VI+++ L +   F I
Sbjct: 241 GHSGLSTFGGSEGVGWATTRAVVNSSLAVIVLNMLISAAAFLI 283


>gi|296179481|gb|ADG96486.1| SupB [Gordonia cholesterolivorans]
          Length = 287

 Score =  172 bits (437), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 59/278 (21%), Positives = 109/278 (39%), Gaps = 6/278 (2%)

Query: 96  QKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLL- 154
             P R      F+ L      +++   +    Q    G  +           +    LL 
Sbjct: 3   SAPTREPSRARFERLAPG---RLLTPADRLGRQLAFYGASLRAVPRAFTHYRRETIRLLA 59

Query: 155 --SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
             SL      V    V ++  ++   G  + QQG+  L + G E  S  + +    RE  
Sbjct: 60  EVSLGAGALAVIGGTVVIIGFLTAAAGYEVGQQGSSSLGRVGVEAMSGFISAFFNTREAI 119

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            ++  V +    GS   A++G+M+++EEIDA+  M +  +  L+S RI A ++++  L  
Sbjct: 120 PVIAGVALTATVGSGFTAQLGAMRVSEEIDALEVMSVQSLPYLVSTRIAAGLVAIIPLYA 179

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           +A F+       V     D     +   F      +++   L+K   MA A+  V    G
Sbjct: 180 IALFTGYAATKFVSVFLSDQSPGTYDHYFQLFLQPSDVAISLLKVIVMAVAVMAVHCYYG 239

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +        +G  V   V  S+ I++++D +  I  + 
Sbjct: 240 YNASGGPAGVGVAVGHAVRTSLIIIMVVDFVVGIALYG 277


>gi|41409700|ref|NP_962536.1| hypothetical protein MAP3602 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41398532|gb|AAS06152.1| hypothetical protein MAP_3602 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 271

 Score =  172 bits (437), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 100/245 (40%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +   +   ++G           + +++       + Q +++        I++S     ++
Sbjct: 19  DQLETPLTLVGGFFRMCVLTGKALFRWPFQWREFVLQCWFIMRVAFLPTIMVSIPLTVLL 78

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
                  L+QFGA   S    +I  + ++G L T +++AG   +AI A++G+  I EEID
Sbjct: 79  IFTLNVLLAQFGAADLSGAGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEID 138

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +G+D +  L+ PR+ A  +   LL  L     ++G  +      ++    + +   
Sbjct: 139 AMEVLGIDPIHRLVVPRVIAATLVATLLNGLVITVGLVGGYLFGVYLQNVSGGAYLATLT 198

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           +   L  +    +KA       G+V    G  V   S  LG  V   VV  +  +  ++ 
Sbjct: 199 TITGLPEVVIATVKAAVFGLIAGLVGCFRGLTVRGGSKGLGTAVNETVVLCVVALYAVNV 258

Query: 363 LFAIF 367
           +    
Sbjct: 259 VLTTI 263


>gi|254773835|ref|ZP_05215351.1| TrnB1 protein [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 260

 Score =  172 bits (437), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 107/251 (42%), Gaps = 1/251 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
            ++   D       +G + + + +     ++        + Q ++V    +   +L++  
Sbjct: 3   ALRLKVDVSGAMQAVGALFAMSADAVKYLFRRPFQWREFLEQSWFVARVSLAPTLLVAIP 62

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
              +++      L + GA   S    +   + ++G L+T +++AG   +A+ A++GS  I
Sbjct: 63  FTVLVSFTLNILLRELGAADLSGAGAAFGAVTQLGPLVTVLIVAGAGATAMCADLGSRTI 122

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EEIDA+  +G++ ++ L++PR+ A  +   LL  L     ++G  +      D+    F
Sbjct: 123 REEIDAMEVLGINPIQRLVTPRMLASGLVAFLLNSLVVIIGVLGGYVFSVFVQDVNPGAF 182

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISI 356
            +       +  +    IKA       G+VA   G +  G  + ++G  V   VV +   
Sbjct: 183 AAGITLLTGVPEVVISCIKAALFGLIAGLVACYRGLSITGGGAKAVGNAVNETVVYAFMS 242

Query: 357 VIIIDSLFAIF 367
           + +++ +    
Sbjct: 243 LFVVNVVVTAI 253


>gi|284043083|ref|YP_003393423.1| hypothetical protein Cwoe_1620 [Conexibacter woesei DSM 14684]
 gi|283947304|gb|ADB50048.1| protein of unknown function DUF140 [Conexibacter woesei DSM 14684]
          Length = 246

 Score =  172 bits (436), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 54/233 (23%), Positives = 104/233 (44%), Gaps = 2/233 (0%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYY-VGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           ++I       +S      +    + Q  + + +   P+++            Q A  L  
Sbjct: 1   MMILTGKTLVSSVRPPYPYGGEFVSQFLFALKLCWFPLLVSTVAFGYGAPGLQAANFLVL 60

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
           FGA         +  +RE    +TA+++AG +G+AI A++G+ KI EE+DA++ +G+D V
Sbjct: 61  FGALDRLGGFFVLASIREFAPFVTAIVLAGVAGTAITADLGARKIREELDALQVLGVDPV 120

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
           + L+ PR  AL++   L  + A    + G  ++       P   FF+ F + A+  +++ 
Sbjct: 121 KNLVVPRFLALMLVTGLFDVYALLFGVFGG-VIATLVNGAPLGPFFATFLTNASTTDLWG 179

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            L+K       I IV   +G      +  +G+ V   VV +   +   + +F 
Sbjct: 180 SLLKTTLFGAIIAIVCCYKGMTASGGAEGVGRAVNQAVVIAFMGIFAFNYVFT 232


>gi|120401972|ref|YP_951801.1| hypothetical protein Mvan_0957 [Mycobacterium vanbaalenii PYR-1]
 gi|119954790|gb|ABM11795.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 281

 Score =  172 bits (436), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 106/236 (44%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +     F    +  +      IRQ  ++  + V   +L++   G  ++ Q A    Q GA
Sbjct: 40  VRTVQYFLLDLFSGRFQWQEFIRQGAFMAGTAVLPTVLVALPIGVTLSIQFALLAGQVGA 99

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
              +     +  +R+   L  A+++A   GSAI A++GS  + EE DA+  MG+  +R L
Sbjct: 100 TSLAGAASGLAVIRQAASLTAAILMAAAVGSAITADLGSRTMREETDAMEVMGVSVIRRL 159

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PR  A I+    LT +  F   + + +    + +     F + F S AT  ++   L+
Sbjct: 160 VVPRFAAAIMIGVALTGVVCFVGFLASYLFNVYFQNGAPGSFVATFASFATTGDMIVALV 219

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           KA      + +V+ ++G A       +   V   VV+SI ++++++   +  Y  +
Sbjct: 220 KAVIFGAIVAVVSCQKGLATQGGPTGVANSVNAAVVESILLLMVVNVAISQLYIMM 275


>gi|326331737|ref|ZP_08198025.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
 gi|325950536|gb|EGD42588.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
          Length = 280

 Score =  171 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 54/268 (20%), Positives = 110/268 (41%), Gaps = 11/268 (4%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N    +G +IVK    +         ++        +    + +   ++  +  V   
Sbjct: 1   MTNTLAQVGNQIVKEQRQAVEGYGD--QLLFYAKALAWAPRTIRRYKREVLNILAEVAFG 58

Query: 167 G---------VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
                     V V+  ++F  G+ +  QG   LSQ G   FS  + +    RE+  L+++
Sbjct: 59  AGGLTMIAGTVGVIAFMAFFAGSEVGIQGYASLSQIGVAKFSAFISAFFNTREVAPLISS 118

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           + +A   G    A +G+M+I+EEIDA+  MG+  +  L++ R+ A  +++  L I+A  +
Sbjct: 119 IALAATVGCGYTARLGAMRISEEIDALEAMGVPSLPYLVTTRMIAGFLAVIPLYIVALCA 178

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           + +   ++    Y      +   F +     +I    +K   +A AI ++    G+    
Sbjct: 179 SYLSPRLITTLMYGQSGGTYDHYFLAFLPPIDILYSFLKLIILAVAIILIHCYYGYTASG 238

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFA 365
               +G  V   +  SI  V++ D   +
Sbjct: 239 GPAGVGIAVGKAIRTSIVTVVVADFFLS 266


>gi|117164592|emb|CAJ88138.1| putative ABC-transporter integral membrane protein [Streptomyces
           ambofaciens ATCC 23877]
          Length = 268

 Score =  171 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 100/246 (40%), Gaps = 9/246 (3%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV---------VILISFVTGAVIAQ 184
            ++               +L  + R +  V      +         +I ++  TG V+  
Sbjct: 14  QLLFYVRSLLWIPRTLHRYLREVQRLLAEVAFGTGGLGVVGGTIGVMIAMTLFTGTVVGL 73

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L Q G   F+  + +    REI  L+  + ++   G+   A++G+M+INEE+DA+
Sbjct: 74  QGYAALDQIGTAAFTGFVSAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVDAL 133

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  +  L++ RI A ++++  L  +   S+ + +  V   +       +   F+  
Sbjct: 134 EGMGIRSLPYLVTTRIIAGVVAIIPLYAIGLLSSYLASRYVTVLFNGQSRGTYDHYFNLF 193

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            +  ++   ++K    +  + +     G+        +G  V   V  +I ++ + D   
Sbjct: 194 LSPTDVLLSVLKVFIFSVMVIVAHCYYGYRASGGPAGVGTAVGRSVRNAIVLISVTDFFL 253

Query: 365 AIFYFA 370
           ++  + 
Sbjct: 254 SLALWG 259


>gi|320007321|gb|ADW02171.1| protein of unknown function DUF140 [Streptomyces flavogriseus ATCC
           33331]
          Length = 267

 Score =  171 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 101/242 (41%), Gaps = 9/242 (3%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVIAQ 184
            +              + +L  + R +  V             + V+I ++  TG+V+  
Sbjct: 13  QLTFYVRALVWIPRTLRRYLKEVQRLLAEVAFGSGGLGVIGGTIGVMIAMTLATGSVVGL 72

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L Q G   F+  + +    REI  L+  + ++   G+   A++G+M+INEE+DA+
Sbjct: 73  QGYAALDQIGTSAFTGFISAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVDAL 132

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  +  L++ RI A ++++  L  +   S+ + +  +   +       +   F+  
Sbjct: 133 EAMGVRSMPYLVTTRIIAGVVAIIPLYAIGLLSSYLASRWITVLFNGQSAGTYDHYFNLF 192

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            +  ++   ++K    +  + +     GF        +G  V   V  +I ++ + D   
Sbjct: 193 LSPDDVLLSVLKVLIFSVLVILAHCYYGFHATGGPAGVGVAVGRSVRNAIVLISVTDFFL 252

Query: 365 AI 366
           ++
Sbjct: 253 SL 254


>gi|254447411|ref|ZP_05060877.1| ABC transporter permease protein [gamma proteobacterium HTCC5015]
 gi|198262754|gb|EDY87033.1| ABC transporter permease protein [gamma proteobacterium HTCC5015]
          Length = 290

 Score =  171 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 112/257 (43%), Gaps = 2/257 (0%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172
            +G+ +V+          ++ L +     +    Y  +  L  +  Q+Y+ G   +    
Sbjct: 26  QVGRYVVQRTVFLFELLRLIYLGVRT--SWFEQGYASRARLAVIGAQVYHTGFKALGTAT 83

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
            ++ V GA++  Q + QL   G       ++ ++ +RE+  L+TA ++  RSG+A+  E+
Sbjct: 84  PLAVVAGALVIFQASNQLYIVGGREHIGQIVIMIVVRELAPLVTAFIVIARSGTAVATEV 143

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
            +M+ N EI+++  +G+     ++ PRI A +I+   L      +A+ G   V   + ++
Sbjct: 144 ANMRANHEIESLEALGIHPYAYVVFPRIMAGMIATICLAFYFMVAAMYGGYFVTVPWSNL 203

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
             + +F        + +    + K       I  ++   G  V    + +    T  V+ 
Sbjct: 204 NVSTYFYALDEAIQIRDYVLFITKTLVSGALIFSISCYYGLQVKQGHDEVPIATTRAVIH 263

Query: 353 SISIVIIIDSLFAIFYF 369
           ++S +I  +   ++ ++
Sbjct: 264 ALSYIIFFNLAASVVFY 280


>gi|262203811|ref|YP_003275019.1| hypothetical protein Gbro_3952 [Gordonia bronchialis DSM 43247]
 gi|262087158|gb|ACY23126.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247]
          Length = 254

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 97/234 (41%), Gaps = 4/234 (1%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  + L + +  E     ++++      + Q + +    +   +L++     +++ 
Sbjct: 9   LGGIGDFVALGVDSARELFHRPFQWR----ETVEQSWAIARVSMVPTLLVAIPFTVLVSF 64

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                L + GA+  S    ++  + +IG ++T +++AG   +AI A++G+  I EEIDA+
Sbjct: 65  TLNILLREIGAQDLSGAGAALGTITQIGPIVTVLIVAGAGATAICADLGARTIREEIDAM 124

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           + +G++ +  L+ PRI A      LL  L     I G  +      D+    F +     
Sbjct: 125 KVLGINPIHRLVVPRIIASTGVAVLLNSLVCTIGIGGGFVFSVYLQDVNPGAFIANLTLL 184

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
                +   ++KA       G+V   +G  V   +  +G  V   VV S   + 
Sbjct: 185 TGFGELMISMVKAALFGLFAGMVGCYQGLNVKGGAKGVGDAVNETVVYSFMALF 238


>gi|302560791|ref|ZP_07313133.1| ABC-transporter integral membrane protein [Streptomyces
           griseoflavus Tu4000]
 gi|302478409|gb|EFL41502.1| ABC-transporter integral membrane protein [Streptomyces
           griseoflavus Tu4000]
          Length = 268

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 100/245 (40%), Gaps = 9/245 (3%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVIAQQ 185
           ++               +L  + R +  V             + V+I ++  TG V+  Q
Sbjct: 15  LLFYARALLWVPRTLHRYLREVQRLLAEVAFGSGGLGVIGGTIGVMIAMTLFTGTVVGLQ 74

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           G   L Q G   F+  + +    REI  L+  + ++   G+   A++G+M+INEE+DA+ 
Sbjct: 75  GYAALDQIGTAAFTGFVSAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVDALE 134

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MG+  +  L++ RI A ++++  L  +   S+ + +  V   +       +   F    
Sbjct: 135 GMGIRSMPYLVTTRIIAGVVAIVPLYAIGLLSSYLASRYVTVLFNGQSRGTYDHYFALFL 194

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           +  ++   ++K    +  + +     G+        +G  V   V  +I ++ + D   +
Sbjct: 195 SPTDVLLSVLKVLIFSVMVILAHCYYGYRATGGPAGVGVAVGRSVRNAIVLISVTDFFLS 254

Query: 366 IFYFA 370
           +  + 
Sbjct: 255 LALWG 259


>gi|54027082|ref|YP_121324.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54018590|dbj|BAD59960.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 288

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 51/273 (18%), Positives = 109/273 (39%), Gaps = 9/273 (3%)

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
           R+            I +  +  ++ +  Q       I+           ++  ++ L+ +
Sbjct: 6   RNPALAKTVRRAGEIARAPLNVVDRAGEQMSFYARAIAWIPRAAVH---YRKEVMRLLAE 62

Query: 160 MYY------VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
           + +      V    + V++ +S   G V+  QG   L   G+ + +  L + +  REI  
Sbjct: 63  VTFGSGALAVIGGTIGVIVFMSGSVGVVVGLQGFKALDAIGSSVLTGFLTAYINTREIAP 122

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           L+ A+ ++   G    A++G+M+I+EEIDA+  M +  V  L++ R+ A  +++  L I+
Sbjct: 123 LVAALALSATVGCGFTAQLGAMRISEEIDALEVMAVPGVPFLVTTRVIAGFLAVIPLYIV 182

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
               A   +  +   +       +   F       ++    +K    A  I +V    GF
Sbjct: 183 GLLGAYFASRSISIWFNGQSSGSYDHYFSLFLPPEDVLYSFLKVLVFAFVIILVHCYYGF 242

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
                   +G  V   V  +I +V ++D   ++
Sbjct: 243 TATGGPAGVGVAVGRAVRAAIVLVNVLDFFLSL 275


>gi|254822928|ref|ZP_05227929.1| hypothetical protein MintA_23574 [Mycobacterium intracellulare ATCC
           13950]
          Length = 255

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 100/245 (40%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +   +   ++G           + +++       + Q +++        I++S     ++
Sbjct: 3   DQLQTPLELVGGFFRMCVLTGKALFRWPFQWREFVLQCWFIMRVAFLPTIMVSIPLTVLL 62

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
                  L+QFGA   S    +I  + ++G L T +++AG   +AI A++G+  I EEID
Sbjct: 63  IFTLNVLLAQFGAADLSGAGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEID 122

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +G+D +  L+ PR+ A  +   LL  L     ++G  +      ++    + +   
Sbjct: 123 AMEVLGIDPIHRLVVPRVIAATLVATLLNGLVITVGLVGGYLFGVYLQNVSGGAYLATLT 182

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           +   L  +    +KA       G+V    G  V   S  LG  V   VV  +  +  ++ 
Sbjct: 183 TITGLPEVVIATVKAAVFGLIAGLVGCFRGLTVRGGSKGLGTAVNETVVLCVVALYAVNV 242

Query: 363 LFAIF 367
           +    
Sbjct: 243 VLTTI 247


>gi|296171119|ref|ZP_06852572.1| integral membrane protein [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295894375|gb|EFG74128.1| integral membrane protein [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 256

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 55/245 (22%), Positives = 107/245 (43%), Gaps = 4/245 (1%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             S      + +          + ++ FLL    Q ++V    +   +L++     ++  
Sbjct: 12  LRSAGEFFAMSLDTFVAMFKLPFPWREFLL----QTWFVARVSIIPTLLLTIPFTVLVVF 67

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                L +FGA  FS    +   + +IG ++T +++AG   +A+ A++G+  I++E+DA+
Sbjct: 68  TMNILLVEFGAADFSGTGAATASVTQIGPVVTVLVVAGTGATAMCADLGARAIHDELDAL 127

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R MG+D VR L +PR+ A  +    L  L     + G+         +    F +     
Sbjct: 128 RVMGVDPVRRLAAPRVLAATVVAVSLVSLVTLVGLGGSFFFSVFIQHVTPGAFAAGLTLL 187

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L ++  GL+K      A  ++A  +G +VG     +G  V   VV S   + +I+ + 
Sbjct: 188 THLPDLVLGLVKGALFGMAAALIACYKGISVGGGPQGVGNAVNETVVYSFIALFVINIVA 247

Query: 365 AIFYF 369
              Y+
Sbjct: 248 TAVYY 252


>gi|218961658|ref|YP_001741433.1| hypothetical protein; putative membrane protein [Candidatus
           Cloacamonas acidaminovorans]
 gi|167730315|emb|CAO81227.1| hypothetical protein; putative membrane protein [Candidatus
           Cloacamonas acidaminovorans]
          Length = 253

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 62/239 (25%), Positives = 118/239 (49%)

Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190
               +     E     +     LL +IRQ+ + GV  +P++  I+   G +   QG   L
Sbjct: 12  FFLFLEETVTELLHIKHNRHVSLLVVIRQILFTGVEALPLIGFIALAIGCLTIMQGYAFL 71

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
           S FG  I+   ++  + + E+  ++TA+++  RSG+AI  E+G+M +N E+  +++  + 
Sbjct: 72  SNFGQGIWVHIILVRVVVGELSGIITALVVIARSGTAISTELGNMVVNREMQLLKSFDIA 131

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
            +  L+  RI  ++IS+ +LT+  N  A++G  +    +  + F  F + F S  T   I
Sbjct: 132 PMGYLVVSRILGVVISMLVLTLYFNIIAVLGGWLFAQFFNHLSFGAFMNDFLSVLTFPYI 191

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              ++K+      I I A  EG +V   S  + ++    VV SI  V+I+D + +  ++
Sbjct: 192 LMTILKSVIFGFVIAITASYEGMSVYRASTEVPQRTIKAVVISIFSVLILDLIISWLFW 250


>gi|311744213|ref|ZP_07718017.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Aeromicrobium marinum DSM 15272]
 gi|311312386|gb|EFQ82299.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Aeromicrobium marinum DSM 15272]
          Length = 257

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 60/239 (25%), Positives = 112/239 (46%)

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G +     +    ++  +      + Q +++    +   IL+S   GA+IA Q      Q
Sbjct: 13  GQIAGMAIDVLRLTFTTRFQTREFVEQAWFITSVTLVPTILVSIPFGAIIALQVGSLTGQ 72

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
            GA+ F+     +  +RE   +  A++IAG +GSAI +++G+ KI EEIDA+  +G+D +
Sbjct: 73  LGAQSFAGATAVLATVREAAPIAAALVIAGAAGSAICSDLGARKIREEIDAMEVLGIDPL 132

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
             L+ PR  A +    L+  +   + I G               F S F + ATL +++ 
Sbjct: 133 ARLVVPRALATVAVALLINGIVITAGIAGGYFFTVVVQGGSAGAFLSSFAALATLPDVYV 192

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
            ++KA        IVA  +G   G   + +G+ V   V+ +  ++ +++++    YF I
Sbjct: 193 AMVKAAVFGFLTAIVAANKGLTAGGGPSGVGRAVNEAVILAFMLLFLLNAIITALYFQI 251


>gi|326383099|ref|ZP_08204788.1| hypothetical protein SCNU_09181 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326198235|gb|EGD55420.1| hypothetical protein SCNU_09181 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 246

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 51/230 (22%), Positives = 95/230 (41%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
            + +G  +S   E     ++        + Q + +    +   +L++     +++     
Sbjct: 1   MNGVGEFVSLAVESARELFRRPFQWRETVEQSWAIARVSLVPTLLVAIPFTVLVSFTLNI 60

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L + GA+  S    ++  + +IG ++T +++AG   +AI A++G+  I EEIDA+  +G
Sbjct: 61  LLREIGAQDLSGAGAALGTITQIGPIVTVLIVAGAGATAICADLGARTIREEIDALEVLG 120

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ V  L+ PR+ A      LL  L     I G  I      D+    F +       L 
Sbjct: 121 INPVHRLVVPRVIASTGVALLLNSLVCTIGIAGGFIFSVYLQDVNPGAFIANLTLLTGLG 180

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
            +   +IKA       G+V    G  V   +  +G  V   VV S   + 
Sbjct: 181 ELVISMIKAALFGLFAGLVGCYRGLNVKGGAKGVGDAVNETVVYSFMALF 230


>gi|118470268|ref|YP_889052.1| hypothetical protein MSMEG_4796 [Mycobacterium smegmatis str. MC2
           155]
 gi|118171555|gb|ABK72451.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
           155]
          Length = 257

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 49/250 (19%), Positives = 107/250 (42%), Gaps = 1/250 (0%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +    +       +G + S + +    +++        + Q +++    +   +L++   
Sbjct: 1   MNLGRNLSGPMQAVGALFSMSLDAIMFAFRRPFQGREFLDQCWFIARVSMAPTLLVAIPF 60

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
             +++      L + GA   S    +   + ++G ++T +++AG   +A+ A++GS  I 
Sbjct: 61  TVLVSFTLNILLRELGAADLSGAGAAFGAVTQLGPMVTVLIVAGAGATAMCADLGSRTIR 120

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+  +G++ ++ L++PRI A  +   LL  L     I+G  +      D+    F 
Sbjct: 121 EEIDAMEVLGINPIQRLVTPRILASGLVALLLNSLVVIIGILGGYVFSVFIQDVNPGAFA 180

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISIV 357
           +       +  +    IKA       G+VA   G   VG  + ++G  V   VV +   +
Sbjct: 181 AGITLLTGVPEVIISCIKAALFGLIAGLVACYRGLTIVGGGAKAVGNAVNETVVYAFMAL 240

Query: 358 IIIDSLFAIF 367
            +I+ +    
Sbjct: 241 FVINVVVTAI 250


>gi|226349636|ref|YP_002776750.1| putative YrbE family protein [Rhodococcus opacus B4]
 gi|226245551|dbj|BAH55898.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 304

 Score =  170 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 49/238 (20%), Positives = 98/238 (41%), Gaps = 9/238 (3%)

Query: 142 FCASSYKFKGFLLSLIRQMYYVGVSG---------VPVVILISFVTGAVIAQQGAFQLSQ 192
             A    F+ +    +R +  V +           + V+ L++   G  + QQGA  L +
Sbjct: 57  IAAIPRTFRRYRAETVRLLAEVSMGTGALAVIGGTLMVISLLTAAVGYEVGQQGATSLGR 116

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
            G    S  + +    RE    +  + +    G+   A++G+M+++EEIDA+ TM +  +
Sbjct: 117 VGIGALSGFISAFFNTREAIPAIAGIALTATVGAGFTAQLGAMRVSEEIDAMETMSIPSL 176

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
             L++ R+ A +I++  L  +A F       +V           F+  F+     +++  
Sbjct: 177 PYLVTTRVMAGVIAVIPLYSVALFVGYAATQLVTVYMIGEAKGTFWHYFNVFLVPSDVIW 236

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             +K   M+  +  V    G+        +G  V   V  S+  +++ID L  I  + 
Sbjct: 237 SAVKVLAMSVVVMCVHCYHGYNASGGPAGVGVAVGRAVRTSLISIMVIDLLIGIAVYG 294


>gi|262196626|ref|YP_003267835.1| hypothetical protein Hoch_3440 [Haliangium ochraceum DSM 14365]
 gi|262079973|gb|ACY15942.1| protein of unknown function DUF140 [Haliangium ochraceum DSM 14365]
          Length = 268

 Score =  170 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 3/225 (1%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSIL 206
           +       + RQMY +G      + +     G V   QGA QL +  G         S L
Sbjct: 41  RRGWRRREVARQMYDIGNRSFVFIAVTMGFFGMVFIYQGALQLDRIVGDVSLLGREFSKL 100

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            ++++G  LTA+M+A R G+ I AE+GSM + E++DA+R  G+  +  L++PR+ A ++ 
Sbjct: 101 LVKDLGPSLTAMMLATRVGAGIAAELGSMTVTEQVDALRMSGVRPIDYLVAPRLLAALVM 160

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326
           +  L I     A     +  W Y+D+    +F    S     ++  GL+KA   A  I +
Sbjct: 161 VTALAIFGTAVAFAAGGLTAWAYFDLNPRAYFD--LSQVEFGHLGLGLVKAVVYAANIPL 218

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           +A   G      S  +G+  T  V+ S   V+  D   ++    +
Sbjct: 219 IAAFCGLRAHGGSAGVGRATTAAVIGSSFAVLSWDLALSLVALQL 263


>gi|15607308|ref|NP_214681.1| integral membrane protein YRBE1A [Mycobacterium tuberculosis H37Rv]
 gi|15839545|ref|NP_334582.1| hypothetical protein MT0176 [Mycobacterium tuberculosis CDC1551]
 gi|31791345|ref|NP_853838.1| integral membrane protein YRBE1A [Mycobacterium bovis AF2122/97]
 gi|121636079|ref|YP_976302.1| integral membrane protein YrbE1a [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148659931|ref|YP_001281454.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis H37Ra]
 gi|148821359|ref|YP_001286113.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis F11]
 gi|167970287|ref|ZP_02552564.1| hypothetical integral membrane protein yrbE1A [Mycobacterium
           tuberculosis H37Ra]
 gi|215406160|ref|ZP_03418341.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis
           02_1987]
 gi|215414032|ref|ZP_03422691.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis
           94_M4241A]
 gi|215448446|ref|ZP_03435198.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis T85]
 gi|218755901|ref|ZP_03534697.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis GM
           1503]
 gi|224988552|ref|YP_002643239.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253797089|ref|YP_003030090.1| hypothetical protein TBMG_00168 [Mycobacterium tuberculosis KZN
           1435]
 gi|254233556|ref|ZP_04926882.1| hypothetical integral membrane protein yrbE1A [Mycobacterium
           tuberculosis C]
 gi|254366619|ref|ZP_04982663.1| hypothetical integral membrane protein yrbE1A [Mycobacterium
           tuberculosis str. Haarlem]
 gi|254549106|ref|ZP_05139553.1| hypothetical protein Mtube_01351 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260185030|ref|ZP_05762504.1| hypothetical protein MtubCP_03112 [Mycobacterium tuberculosis
           CPHL_A]
 gi|289445698|ref|ZP_06435442.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           CPHL_A]
 gi|289552419|ref|ZP_06441629.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           KZN 605]
 gi|289747934|ref|ZP_06507312.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis
           02_1987]
 gi|289760269|ref|ZP_06519647.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|289764283|ref|ZP_06523661.1| hypothetical integral membrane protein yrbE1A [Mycobacterium
           tuberculosis GM 1503]
 gi|294994641|ref|ZP_06800332.1| hypothetical protein Mtub2_09017 [Mycobacterium tuberculosis 210]
 gi|297632645|ref|ZP_06950425.1| hypothetical protein MtubK4_00901 [Mycobacterium tuberculosis KZN
           4207]
 gi|297729620|ref|ZP_06958738.1| hypothetical protein MtubKR_00931 [Mycobacterium tuberculosis KZN
           R506]
 gi|298527559|ref|ZP_07014968.1| YrbE1A [Mycobacterium tuberculosis 94_M4241A]
 gi|306774257|ref|ZP_07412594.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu001]
 gi|306779001|ref|ZP_07417338.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu002]
 gi|306782789|ref|ZP_07421111.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu003]
 gi|306787156|ref|ZP_07425478.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu004]
 gi|306791712|ref|ZP_07430014.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu005]
 gi|306795756|ref|ZP_07434058.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu006]
 gi|306801752|ref|ZP_07438420.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu008]
 gi|306805963|ref|ZP_07442631.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu007]
 gi|306970359|ref|ZP_07483020.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu009]
 gi|306974591|ref|ZP_07487252.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu010]
 gi|307082300|ref|ZP_07491470.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu011]
 gi|307082645|ref|ZP_07491758.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu012]
 gi|313656946|ref|ZP_07813826.1| hypothetical protein MtubKV_00916 [Mycobacterium tuberculosis KZN
           V2475]
 gi|2213504|emb|CAB09750.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE1A
           [Mycobacterium tuberculosis H37Rv]
 gi|13879657|gb|AAK44396.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|31616930|emb|CAD93037.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE1A
           [Mycobacterium bovis AF2122/97]
 gi|110348076|gb|ABG72765.1| YrbE1A [Expression vector yrbE1AB]
 gi|121491726|emb|CAL70188.1| Conserved hypothetical integral membrane protein yrbE1A
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124603349|gb|EAY61624.1| hypothetical integral membrane protein yrbE1A [Mycobacterium
           tuberculosis C]
 gi|134152131|gb|EBA44176.1| hypothetical integral membrane protein yrbE1A [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148504083|gb|ABQ71892.1| conserved hypothetical integral membrane protein YrbE1a
           [Mycobacterium tuberculosis H37Ra]
 gi|148719886|gb|ABR04511.1| hypothetical integral membrane protein yrbE1A [Mycobacterium
           tuberculosis F11]
 gi|224771665|dbj|BAH24471.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253318592|gb|ACT23195.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           KZN 1435]
 gi|289418656|gb|EFD15857.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           CPHL_A]
 gi|289437051|gb|EFD19544.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           KZN 605]
 gi|289688462|gb|EFD55950.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis
           02_1987]
 gi|289711789|gb|EFD75805.1| hypothetical integral membrane protein yrbE1A [Mycobacterium
           tuberculosis GM 1503]
 gi|289715833|gb|EFD79845.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|298497353|gb|EFI32647.1| YrbE1A [Mycobacterium tuberculosis 94_M4241A]
 gi|308217091|gb|EFO76490.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu001]
 gi|308328029|gb|EFP16880.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu002]
 gi|308332309|gb|EFP21160.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu003]
 gi|308336191|gb|EFP25042.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu004]
 gi|308339691|gb|EFP28542.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu005]
 gi|308343698|gb|EFP32549.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu006]
 gi|308347571|gb|EFP36422.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu007]
 gi|308351470|gb|EFP40321.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu008]
 gi|308352197|gb|EFP41048.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu009]
 gi|308356146|gb|EFP44997.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu010]
 gi|308360101|gb|EFP48952.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu011]
 gi|308367649|gb|EFP56500.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu012]
 gi|323717156|gb|EGB26365.1| hypothetical protein TMMG_00596 [Mycobacterium tuberculosis
           CDC1551A]
 gi|326905924|gb|EGE52857.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           W-148]
 gi|328456876|gb|AEB02299.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           KZN 4207]
 gi|328864228|gb|AEB53197.1| conserved integral membrane protein YRBE1A [Mycobacterium
           tuberculosis]
          Length = 265

 Score =  170 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 52/245 (21%), Positives = 101/245 (41%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +   +   ++G           + +++       I Q +++   G    I++S     ++
Sbjct: 13  DQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTVLL 72

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
                  L+QFGA   S    +I  + ++G L T +++AG   +AI A++G+  I EEID
Sbjct: 73  IFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEID 132

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +G+D +  L+ PR+ A ++   LL  L     ++G  +      ++    + +   
Sbjct: 133 AMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLATLT 192

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L  +    IKA       G+V    G  V   S  LG  V   VV  +  +  ++ 
Sbjct: 193 LITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFAVNV 252

Query: 363 LFAIF 367
           +    
Sbjct: 253 ILTTI 257


>gi|118464753|ref|YP_884137.1| hypothetical protein MAV_5017 [Mycobacterium avium 104]
 gi|254776559|ref|ZP_05218075.1| hypothetical protein MaviaA2_18089 [Mycobacterium avium subsp.
           avium ATCC 25291]
 gi|118166040|gb|ABK66937.1| conserved hypothetical protein [Mycobacterium avium 104]
          Length = 258

 Score =  170 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 100/245 (40%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +   +   ++G           + +++       + Q +++        I++S     ++
Sbjct: 6   DQLETPLTLVGGFFRMCVLTGKALFRWPFQWREFVLQCWFIMRVAFLPTIMVSIPLTVLL 65

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
                  L+QFGA   S    +I  + ++G L T +++AG   +AI A++G+  I EEID
Sbjct: 66  IFTLNVLLAQFGAADLSGAGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEID 125

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +G+D +  L+ PR+ A  +   LL  L     ++G  +      ++    + +   
Sbjct: 126 AMEVLGIDPIHRLVVPRVIAATLVATLLNGLVITVGLVGGYLFGVYLQNVSGGAYLATLT 185

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           +   L  +    +KA       G+V    G  V   S  LG  V   VV  +  +  ++ 
Sbjct: 186 TITGLPEVVIATVKAAVFGLIAGLVGCFRGLTVRGGSKGLGTAVNETVVLCVVALYAVNV 245

Query: 363 LFAIF 367
           +    
Sbjct: 246 VLTTI 250


>gi|108800639|ref|YP_640836.1| hypothetical protein Mmcs_3673 [Mycobacterium sp. MCS]
 gi|119869778|ref|YP_939730.1| hypothetical protein Mkms_3746 [Mycobacterium sp. KMS]
 gi|108771058|gb|ABG09780.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
 gi|119695867|gb|ABL92940.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
          Length = 270

 Score =  170 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 50/247 (20%), Positives = 104/247 (42%), Gaps = 1/247 (0%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           + +       +G + + + +   + ++        + Q ++V    +   +L++     +
Sbjct: 17  VKNLAGPMAAVGGLFAMSADAIRNVFRRPFQWREFLEQSWFVAKVSLAPTVLVAIPFTVL 76

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           ++      L + GA   S    +   + ++G L+T +++AG   +A+ A++GS  I EEI
Sbjct: 77  VSFTLNILLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEI 136

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
            A+  +G+D V+ L++PR+ A  +   LL  L     I+G         D+    F +  
Sbjct: 137 SAMEVLGIDPVQRLVTPRMLASGLVALLLNSLVVIIGILGGYTFSVFIQDVNPGAFAAGI 196

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-GVHSNSLGKKVTTCVVQSISIVIII 360
                +  +    +KA       G+VA   G  V G  + ++G  V   VV +   +  I
Sbjct: 197 TLLTGVPEMIISCVKALLFGLIAGLVACYRGLTVSGGGAKAVGNAVNETVVYAFMALFAI 256

Query: 361 DSLFAIF 367
           + L    
Sbjct: 257 NVLVTTV 263


>gi|260203312|ref|ZP_05770803.1| hypothetical protein MtubK8_03235 [Mycobacterium tuberculosis K85]
 gi|289572747|ref|ZP_06452974.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis K85]
 gi|289537178|gb|EFD41756.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis K85]
          Length = 265

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 52/245 (21%), Positives = 101/245 (41%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +   +   ++G           + +++       I Q +++   G    I++S     ++
Sbjct: 13  DQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTVLL 72

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
                  L+QFGA   S    +I  + ++G L T +++AG   +AI A++G+  I EEID
Sbjct: 73  IFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEID 132

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +G+D +  L+ PR+ A ++   LL  L     ++G  +      ++    + +   
Sbjct: 133 AMEVLGIDPIHRLVVPRVLASMLVATLLNSLVITVGLVGGFLFGVYLQNVSGGAYLATLT 192

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L  +    IKA       G+V    G  V   S  LG  V   VV  +  +  ++ 
Sbjct: 193 LITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFAVNV 252

Query: 363 LFAIF 367
           +    
Sbjct: 253 ILTTI 257


>gi|325673338|ref|ZP_08153030.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Rhodococcus equi ATCC 33707]
 gi|325555928|gb|EGD25598.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Rhodococcus equi ATCC 33707]
          Length = 269

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 55/247 (22%), Positives = 110/247 (44%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           +    +++G  +        +  + +  L   ++Q  ++G       +L+    G  +A 
Sbjct: 16  ALQGGYLIGFSVQAMVSLARALLRGRLSLEETVKQTLFIGRVSTGPSLLLMVPIGVFVAV 75

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                  + GA  +S  +++ + + +   L+ A+M+AG +GSAI  ++GS KI EEIDA+
Sbjct: 76  SVGELAGRIGAGGYSGAVVAFIIVGQASALVCALMMAGVAGSAICTDLGSRKIREEIDAM 135

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+D V  L++PR+ A ++    L  +  F  ++   +       +P   F + F   
Sbjct: 136 EVMGIDVVERLVAPRLLAAVVVSVALCAMVTFGGVMACYLYHIYVQHLPAGTFLATFGQY 195

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
              A+    L+KA   A    +VA  +G         +   V   VV + ++V ++++  
Sbjct: 196 GRTADFVMALVKAAIFALTSTLVATFKGLHAKGGPRGVADAVNEAVVIAFALVFVVNTAL 255

Query: 365 AIFYFAI 371
           +  Y  I
Sbjct: 256 SALYTVI 262


>gi|271964523|ref|YP_003338719.1| resistance to organic solvents ABC transporter permease
           [Streptosporangium roseum DSM 43021]
 gi|270507698|gb|ACZ85976.1| ABC-type transport system involved in resistance to organic
           solvents permease component-like protein
           [Streptosporangium roseum DSM 43021]
          Length = 288

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 59/210 (28%), Positives = 103/210 (49%)

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           +G   V V   ++F  GA +  QG   L   GAE F   + S   +REI  ++ AV +A 
Sbjct: 72  IGGGMVFVAFTMAFAVGATVGLQGYQGLQAIGAESFIGLVGSFANVREITPIIAAVALAA 131

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           + GS+  AE+G+M+I+EEIDA+  M ++    LI  R+ A +I+L  + ++A F++    
Sbjct: 132 QVGSSFTAELGAMRISEEIDALEVMAINAFTYLICTRVVAALIALVPVYLIALFASFFAT 191

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
            ++    + +   V+   F+    L +I   +IK    A A+  +    GF        +
Sbjct: 192 RLMCTVLFGMSPGVYDYYFYLGLPLIDIVYSVIKVIVFAFAVISIHCYYGFNATGGPVGV 251

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           G      + QSI  VI+++ L +  ++  G
Sbjct: 252 GTAAGRAIRQSIVTVILLNLLLSYLFWGNG 281


>gi|215425374|ref|ZP_03423293.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis T92]
 gi|215433087|ref|ZP_03431006.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis
           EAS054]
 gi|219555965|ref|ZP_03535041.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis T17]
 gi|260199170|ref|ZP_05766661.1| hypothetical protein MtubT4_03250 [Mycobacterium tuberculosis T46]
 gi|289441542|ref|ZP_06431286.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           T46]
 gi|289568066|ref|ZP_06448293.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           T17]
 gi|289748643|ref|ZP_06508021.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           T92]
 gi|289756232|ref|ZP_06515610.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
 gi|289414461|gb|EFD11701.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           T46]
 gi|289541819|gb|EFD45468.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           T17]
 gi|289689230|gb|EFD56659.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           T92]
 gi|289696819|gb|EFD64248.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
          Length = 265

 Score =  170 bits (431), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 52/245 (21%), Positives = 101/245 (41%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +   +   ++G           + +++       I Q +++   G    I++S     ++
Sbjct: 13  DQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTVLL 72

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
                  L+QFGA   S    +I  + ++G L T +++AG   +AI A++G+  I EEID
Sbjct: 73  IFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEID 132

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +G+D +  L+ PR+ A ++   LL  L     ++G  +      ++    + +   
Sbjct: 133 AMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLATLT 192

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L  +    IKA       G+V    G  V   S  LG  V   VV  +  +  ++ 
Sbjct: 193 LITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFAVNV 252

Query: 363 LFAIF 367
           +    
Sbjct: 253 ILTTI 257


>gi|325003317|ref|ZP_08124429.1| integral membrane protein yrbe4b [Pseudonocardia sp. P1]
          Length = 280

 Score =  170 bits (430), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 53/271 (19%), Positives = 104/271 (38%), Gaps = 10/271 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILG-LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG- 167
           +   +G +  +      +Q   LG  +   T          K +   + R +  V     
Sbjct: 1   MATQLGTRARRLAQAPLNQLEELGDQLSLYTRSIVWIPKTLKDYRKEVARLLAEVSFGSG 60

Query: 168 --------VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219
                   V V+  +S   G+++  QG   L   G E  +  + +    R I  L+ A  
Sbjct: 61  ALIVILGTVGVMASLSLFVGSLVGLQGFRALDALGVEALTGFITAYFNTRSIAPLVAASA 120

Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279
           +    G+   A++G+M+I+EEIDA+  M +  V  L++ R+ A I+++  +  L   ++ 
Sbjct: 121 LTATLGAGFTAQLGAMRISEEIDALEVMAVPSVPYLVTTRVIAGIVAIIPIYTLGLLASY 180

Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339
             A + +     +    +   F     ++++    +K    A  I ++    G+A     
Sbjct: 181 AAARLNVTLVNGLSGGTYDHYFDLFLPVSDVLLSYLKVIVFATVIILIHCHYGYAAKGGP 240

Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             +G  V   V  SI    I+D    +  F 
Sbjct: 241 AGVGVAVGRAVRLSIVSTAILDFFLTLVMFG 271


>gi|256820380|ref|YP_003141659.1| hypothetical protein Coch_1553 [Capnocytophaga ochracea DSM 7271]
 gi|315223460|ref|ZP_07865317.1| ABC superfamily ATP binding cassette transporter permease protein
           [Capnocytophaga ochracea F0287]
 gi|256581963|gb|ACU93098.1| protein of unknown function DUF140 [Capnocytophaga ochracea DSM
           7271]
 gi|314946633|gb|EFS98624.1| ABC superfamily ATP binding cassette transporter permease protein
           [Capnocytophaga ochracea F0287]
          Length = 245

 Score =  170 bits (430), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 102/243 (41%), Gaps = 2/243 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G       +      ++      ++R++  +    + +V  ISF  G V+A Q A 
Sbjct: 4   IAAVGGYFIMLYDVFRKRTRWSIMKDLILREIDDLIFGSIGIVTFISFFVGGVVAVQTAL 63

Query: 189 QLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +   F  +           + E     TA+++AG+ GS I + IG+M++ E+IDA+  M
Sbjct: 64  NIDNPFIPKYLIGFATRQSIVLEFAPTFTAIILAGKIGSFITSSIGTMRVTEQIDALDIM 123

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++ V  L+ P+I AL++ +P L  L  +  ++G             A F          
Sbjct: 124 GVNSVNYLVFPKIVALML-MPFLIALGMYLGVLGGWASAVMSGYTTSAEFVQGVQYDFKP 182

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            ++     K    A  +  +    G+ +   +  +GK  T   V +  ++I+ +S+    
Sbjct: 183 YSMIYAFTKTVVFAFFLATIPSYHGYYMKGGALDVGKASTVSFVWTSIVIILSNSVLTQL 242

Query: 368 YFA 370
           ++A
Sbjct: 243 FYA 245


>gi|126436263|ref|YP_001071954.1| hypothetical protein Mjls_3686 [Mycobacterium sp. JLS]
 gi|126236063|gb|ABN99463.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 270

 Score =  170 bits (430), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 50/247 (20%), Positives = 103/247 (41%), Gaps = 1/247 (0%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           + +       +G + + + +     ++        + Q ++V    +   +L++     +
Sbjct: 17  VKNLAGPMAAVGGLFAMSADAIRYVFRRPFQWREFLEQSWFVAKVSLAPTVLVAIPFTVL 76

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           ++      L + GA   S    +   + ++G L+T +++AG   +A+ A++GS  I EEI
Sbjct: 77  VSFTLNILLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEI 136

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
            A+  +G+D V+ L++PR+ A  +   LL  L     I+G         D+    F +  
Sbjct: 137 SAMEVLGIDPVQRLVTPRMLASGLVALLLNSLVVIIGILGGYTFSVFIQDVNPGAFAAGI 196

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-GVHSNSLGKKVTTCVVQSISIVIII 360
                +  +    +KA       G+VA   G  V G  + ++G  V   VV +   +  I
Sbjct: 197 TLLTGVPEMIISCVKALLFGLIAGLVACYRGLTVSGGGAKAVGNAVNETVVYAFMALFAI 256

Query: 361 DSLFAIF 367
           + L    
Sbjct: 257 NVLVTTV 263


>gi|282866016|ref|ZP_06275064.1| protein of unknown function DUF140 [Streptomyces sp. ACTE]
 gi|282559055|gb|EFB64609.1| protein of unknown function DUF140 [Streptomyces sp. ACTE]
          Length = 267

 Score =  169 bits (429), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 100/242 (41%), Gaps = 9/242 (3%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVIAQ 184
            +                +L  + R +  V             + V+I ++  TG+V+  
Sbjct: 13  QLTFYVRALVWIPRTLHRYLREVQRLLAEVAFGSGGLGVIGGTIGVMIAMTLATGSVVGL 72

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L Q G   F+  + +    REI  L+  + ++   G+   A++G+M+INEE+DA+
Sbjct: 73  QGYAALDQIGTSAFTGFISAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVDAL 132

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  +  L++ RI A ++++  L  +   S+ + +  +   +       +   F+  
Sbjct: 133 EAMGVRSMPYLVTTRIIAGVVAIIPLYAIGLLSSYLASRYITVLFNGQSAGTYDHYFNLF 192

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            +  ++   ++K    +  + +     GF        +G  V   V  +I ++ + D   
Sbjct: 193 LSPDDVLLSVLKVLIFSVLVILAHCYYGFHATGGPAGVGVAVGRSVRNAIVLISVTDFFL 252

Query: 365 AI 366
           ++
Sbjct: 253 SL 254


>gi|324997538|ref|ZP_08118650.1| hypothetical protein PseP1_02178 [Pseudonocardia sp. P1]
          Length = 246

 Score =  169 bits (429), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 58/245 (23%), Positives = 104/245 (42%), Gaps = 8/245 (3%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI-AQQG 186
            A +LG V+ +            G+   +  Q++ V       + +     G      Q 
Sbjct: 1   MAELLGRVVYSAVRHPV------GYWGDVRDQLFEVLKLCWFPMAVACVAFGFGAPGLQA 54

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
                 FG          +  +RE    + A+++AG  G+A+ A++G+ +I EEIDA+  
Sbjct: 55  GNLFILFGIPERLGSFFVMASVREFAPWINAMVVAGVVGTAMTADLGARRIREEIDAMEV 114

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +G+D VR LI PRI A+ I   L+ ++A    ++G  +      D   A F   F S AT
Sbjct: 115 LGIDPVRALILPRIIAVTIMTGLMDLIALSFGVLGGYLAA-IQLDAGSAAFQQNFFSNAT 173

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
             +++  ++K       IG+V   +GF        +G+ V   VV + + +   + +F  
Sbjct: 174 TIDLWGSVLKTTLFGLIIGVVCCYKGFRAQGGPAGVGRAVNQAVVIAFAAIWSFNFVFTT 233

Query: 367 FYFAI 371
               +
Sbjct: 234 ILLGL 238


>gi|300789440|ref|YP_003769731.1| ABC transporter permease [Amycolatopsis mediterranei U32]
 gi|299798954|gb|ADJ49329.1| ABC transport system permease protein [Amycolatopsis mediterranei
           U32]
          Length = 271

 Score =  169 bits (428), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 95/242 (39%), Gaps = 9/242 (3%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---------VPVVILISFVTGAVIAQ 184
            ++       A       +   ++R +  V             + V++ +   TG  +  
Sbjct: 17  QLLFYVRALAAVPLAVTRYFREVVRLLAEVTFGSGALAVIGGTIGVMVGLCVFTGVTVGL 76

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+Q      +  L +    REI  L+  + ++   GS   A++G+M+I+EEIDA+
Sbjct: 77  QGFSALNQINISAMTGFLTAYFNTREIAPLVAGLALSSTVGSGFTAQLGAMRISEEIDAL 136

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +  +  L++ RI A  I++  L ++    + +G+ +    ++      +   F   
Sbjct: 137 EVMAVRSMPYLVTTRIVAGFIAIIPLYVIGLLISYLGSRLTTVVFFGQSGGTYDHYFTLF 196

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               ++     K    +  + +     G+        +G  V   V  SI ++ ++D   
Sbjct: 197 LPPGDVLWSFGKVLVFSVGVILTHCFYGYRASGGPAGVGVAVGRAVRTSIVLISVLDLFL 256

Query: 365 AI 366
           ++
Sbjct: 257 SL 258


>gi|145223093|ref|YP_001133771.1| hypothetical protein Mflv_2506 [Mycobacterium gilvum PYR-GCK]
 gi|145215579|gb|ABP44983.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
          Length = 269

 Score =  169 bits (428), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 49/244 (20%), Positives = 102/244 (41%), Gaps = 5/244 (2%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +      + +          ++++ FL     Q ++V    +   +L++     +++ 
Sbjct: 23  MQAVGGFFSMALDAVRFVFVRPFQWREFL----EQSWFVAKVSMAPTLLVAIPFTVLVSF 78

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                L + GA   S    +   + ++G L+T +++AG   +A+ A++GS  I EEIDA+
Sbjct: 79  TLNILLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEIDAM 138

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             +G++ V+ L++PR+ A  +   LL  L     I+G         D+    F +     
Sbjct: 139 EVLGINPVQRLVTPRMLASGLVALLLNSLVVIIGILGGYFFSIFVQDVNPGAFAAGITLL 198

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             +  +    +KA       G+VA   G    G  + ++G  V   VV +   + +I+ +
Sbjct: 199 TGVPEVIISCVKAALFGLIAGLVACYRGLTITGGGAKAVGNAVNETVVYAFMALFVINVV 258

Query: 364 FAIF 367
               
Sbjct: 259 VTAI 262


>gi|183984680|ref|YP_001852971.1| hypothetical protein MMAR_4712 [Mycobacterium marinum M]
 gi|183178006|gb|ACC43116.1| conserved hypothetical membrane protein [Mycobacterium marinum M]
          Length = 268

 Score =  169 bits (428), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 47/240 (19%), Positives = 104/240 (43%), Gaps = 1/240 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G + + + +    +++        + Q ++V    +   +L++     +++     
Sbjct: 22  MQAVGGLFAMSADAIKFAFRRPFQWREFLEQSWFVARVAMLPTLLVAIPFTVLVSFTLNI 81

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L + GA   S    +   + ++G L+T +++AG   +A+ A++GS  I EEIDA+  +G
Sbjct: 82  LLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEIDAMEVLG 141

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ V+ L++PR+ A  +   LL  L     I+G  +      D+    F +       + 
Sbjct: 142 INPVQRLVTPRMLASGLVALLLNSLVVIIGIVGGYVFSVFVQDVNPGAFAAGITLLTGVP 201

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +    +KA       G+VA   G    G  + ++G  V   VV +   + +++ +    
Sbjct: 202 EVIISCVKAALFGLIAGLVACYRGLTISGGGAKAVGNAVNETVVYAFMSLFVVNVVVTAI 261


>gi|289641746|ref|ZP_06473904.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
 gi|289508390|gb|EFD29331.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
          Length = 290

 Score =  169 bits (428), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 50/250 (20%), Positives = 98/250 (39%), Gaps = 1/250 (0%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                     G +   +          + +   +  Q   + +S   ++  + F+ G   
Sbjct: 33  RGVKQAVTTGGEIAQFSARTIRDFGDIRHYASEVFHQAGILILSSGLIIWSMQFIMGMQC 92

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
             + ++ L Q GA ++S    +   LRE+   +   + A + G  +VAEIGSM+I +EID
Sbjct: 93  GLEASYTLKQIGAPLYSGIFNAYCSLREMAPYMYGYIFAAKVGCGLVAEIGSMRIADEID 152

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY-DIPFAVFFSRF 301
           A+  MG+     L+  RI A  I++P L  +      I   +V       +    +   F
Sbjct: 153 AMEVMGVRSRSYLVGTRIMAAWIAMPFLFTVGLGLMYISMYLVTVVQLGGVSAGGYNYIF 212

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                  +    +IK   M   I  V+   G+     S  +GK     ++ ++ ++ +I 
Sbjct: 213 WLYQNPLDFLFSMIKMLSMGTTIVFVSCYYGYTASGGSVGVGKNTAKSMMLNMVLIHVIG 272

Query: 362 SLFAIFYFAI 371
            L    ++ +
Sbjct: 273 LLTTQLFWGL 282


>gi|315443550|ref|YP_004076429.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|315261853|gb|ADT98594.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 269

 Score =  169 bits (428), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 49/244 (20%), Positives = 102/244 (41%), Gaps = 5/244 (2%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +      + +          ++++ FL     Q ++V    +   +L++     +++ 
Sbjct: 23  MQAVGGFFSMALDAVRFVFVRPFQWREFL----EQSWFVAKVSMAPTLLVAIPFTVLVSF 78

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                L + GA   S    +   + ++G L+T +++AG   +A+ A++GS  I EEIDA+
Sbjct: 79  TLNILLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEIDAM 138

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             +G++ V+ L++PR+ A  +   LL  L     I+G         D+    F +     
Sbjct: 139 EVLGINPVQRLVTPRMLASGLVALLLNSLVVIIGILGGYFFSIFVQDVNPGAFAAGITLL 198

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             +  +    +KA       G+VA   G    G  + ++G  V   VV +   + +I+ +
Sbjct: 199 TGVPEVIISCVKAALFGLIAGLVACYRGLTITGGGAKAVGNAVNETVVYAFMALFVINVV 258

Query: 364 FAIF 367
               
Sbjct: 259 VTAI 262


>gi|188995184|ref|YP_001929436.1| hypothetical protein PGN_1320 [Porphyromonas gingivalis ATCC 33277]
 gi|188594864|dbj|BAG33839.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
           33277]
          Length = 217

 Score =  169 bits (428), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 53/208 (25%), Positives = 105/208 (50%), Gaps = 1/208 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +G          +   +++     LI+++  +GV  V +VI+ISF  GAVI  Q +
Sbjct: 5   TLQQIGEYTKLMQRTFSLPNRWRMSFRELIKEIDKLGVDSVWIVIIISFFIGAVITIQLS 64

Query: 188 FQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
             ++      F+I   +  + L E    +  +++AG+ GS+I +E+G+M++ E+IDA+  
Sbjct: 65  LNMTSPLIPRFTIGYSTREIILLEFSSTVMCLILAGKVGSSIASELGTMRVTEQIDAMEV 124

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +G++    LI P+I   ++ +P+L+I++  + I+G  +      ++P + F        +
Sbjct: 125 IGVNSANYLILPKIIGFMLFVPVLSIISMSTGIVGGYLACSLVPNLPRSDFEYGLQLFFS 184

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFA 334
             N+F  +IK+   A  I  VA   G+ 
Sbjct: 185 PYNVFYSIIKSVAYAFIISSVAGYYGYT 212


>gi|240170711|ref|ZP_04749370.1| hypothetical protein MkanA1_15455 [Mycobacterium kansasii ATCC
           12478]
          Length = 255

 Score =  168 bits (427), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 51/247 (20%), Positives = 108/247 (43%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +        +G   + + +   + +K+       + Q ++V    +   +L++     ++
Sbjct: 5   DTVIKPLRSVGEFFAMSLDTLVAMFKWPFPWREFLLQSWFVARVSIIPTLLLAIPFTVLV 64

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
                  L +FGA  FS    +   + +IG ++T +++AG   +A+ A++G+  I++E+D
Sbjct: 65  VFTLNILLVEFGAADFSGTGAATASVTQIGPIVTVLVVAGTGATAMCADLGARTIHDELD 124

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R MG+D +R L +PR+ A  +    L  L     + G+         +    F +   
Sbjct: 125 ALRVMGVDPIRRLAAPRVLAATVVAVSLVSLVTLVGLAGSFAFSVFVQHVTPGAFAAGLT 184

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L  +  GL+K      A  ++A  +G +VG     +G  V   VV S   + +I+ 
Sbjct: 185 LITHLPELILGLVKGALFGMAAALIACYKGISVGGGPQGVGNAVNETVVYSFIALFVINI 244

Query: 363 LFAIFYF 369
           +    ++
Sbjct: 245 VATAVFY 251


>gi|225011579|ref|ZP_03702017.1| protein of unknown function DUF140 [Flavobacteria bacterium
           MS024-2A]
 gi|225004082|gb|EEG42054.1| protein of unknown function DUF140 [Flavobacteria bacterium
           MS024-2A]
          Length = 245

 Score =  168 bits (427), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 51/239 (21%), Positives = 97/239 (40%), Gaps = 2/239 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G              K+K     +++ +  + +  + +V  ISF  G V+A Q A  L 
Sbjct: 7   IGNYFIMLKLTFGKFTKWKILKQLILKDIDTLIIGSLGIVSFISFFVGGVVAIQTALNLE 66

Query: 192 QFGAE-IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
                            + E      ++++AG+ GS I + IG+M++ E+IDA+  MG++
Sbjct: 67  NPLLPKNLIGFAARQSIILEFAPTFISIIMAGKVGSYITSSIGTMRVTEQIDALEVMGIN 126

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
               LI P+I +L +  PL+  ++ F  I G  I          A +           +I
Sbjct: 127 THNYLIFPKIVSLSL-YPLVICISMFLGIFGGYIAAVYGGFSSSADYIEGIQMDFIPFHI 185

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               IK  F +  +  +    G+ +   +  +GK  T   V +  ++I+++ L      
Sbjct: 186 TYAFIKTSFFSFILATIPAYHGYYMNGGALEVGKASTVSFVWTSVVIILLNYLITQLLL 244


>gi|120437216|ref|YP_862902.1| ABC-type transporter permease protein [Gramella forsetii KT0803]
 gi|117579366|emb|CAL67835.1| ABC-type transporter permease protein [Gramella forsetii KT0803]
          Length = 245

 Score =  168 bits (427), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 53/246 (21%), Positives = 101/246 (41%), Gaps = 2/246 (0%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            +  H +G              K       + +++  + +  + +V  +SF  GAV+A Q
Sbjct: 1   MTYLHSIGEYFIMLKGVFGRMTKGSVLRNLIFKEINELIMGSLGIVAFLSFFIGAVVAIQ 60

Query: 186 GAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            A  L+        +   +    + E      ++++AG+ GS I + IGSM++ E+IDA+
Sbjct: 61  TALNLNNPLIPKSLVAFAARQSVILEFAPTFISIIMAGKVGSFITSSIGSMRVTEQIDAL 120

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG++    LI P+I A +++ P L  +A F  I GA         +    F +     
Sbjct: 121 EVMGINSKNYLILPKIIA-MLTYPFLIAIAMFLGIAGAYFAAVFGGFVTSDQFLTGLQDD 179

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               ++    IK    A  +  V    G+ +   +  +G+  TT  V +  ++II +   
Sbjct: 180 FNGFHLTYAFIKTFLFAFILATVPSYHGYYMKGGALEVGEASTTSFVWTSVVLIITNYAI 239

Query: 365 AIFYFA 370
                +
Sbjct: 240 TQLLLS 245


>gi|326382400|ref|ZP_08204092.1| putative YrbE family protein [Gordonia neofelifaecis NRRL B-59395]
 gi|326199130|gb|EGD56312.1| putative YrbE family protein [Gordonia neofelifaecis NRRL B-59395]
          Length = 268

 Score =  168 bits (427), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 47/208 (22%), Positives = 97/208 (46%)

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           VG     V++++    GA I  QG   L   G    +  + S    RE+  ++ A+  A 
Sbjct: 52  VGGGTAVVLVILGMAVGASIGIQGYASLDLVGMGSLTGFISSYANTRELAPMIAAIGFAA 111

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           ++G  + AEIGSM+I EEIDA+ +M +  +  ++S R+ A I ++  L I+    + + A
Sbjct: 112 QAGCRLTAEIGSMRIAEEIDALESMAVRPIPYVVSTRVVAAITTIIPLYIVTLILSFVAA 171

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
            +V+   +      +   F++     ++   +IK      ++ IV   +GF     +  +
Sbjct: 172 KLVVILMHGQSGGTYDFYFNAFLKPQDLVFSVIKVLIFVVSVVIVHSYQGFYATGGAEGV 231

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G+     +  S+ ++++ D +  +  + 
Sbjct: 232 GRASGRAIRSSLIVIVVEDMILTLLMWG 259


>gi|262201204|ref|YP_003272412.1| hypothetical protein Gbro_1221 [Gordonia bronchialis DSM 43247]
 gi|262084551|gb|ACY20519.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247]
          Length = 349

 Score =  168 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 47/193 (24%), Positives = 89/193 (46%)

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G ++  Q    ++Q GA+           +++   L   +++ G   SAI A++G+ 
Sbjct: 148 IPLGIIVTVQIGNIINQLGAQSLLGAGSGFAVIQQAAPLAAGMLLGGAGASAIAADLGAR 207

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
            + EEIDA+RTMG+D V  L+ PR+ A ++  PL+ +      ++ A  +   + D+   
Sbjct: 208 TVREEIDAMRTMGIDPVARLVVPRVLAAVVVAPLIALFIVLVGVLSAYYLAITFQDVGPG 267

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            ++  F S +++ +IF  L KA      I +V  + G         +   V   VV S  
Sbjct: 268 SYWQSFGSFSSVRDIFLALFKAVVFGFIIAVVGCQRGLEARGGPRGVADGVNATVVVSTV 327

Query: 356 IVIIIDSLFAIFY 368
            +I ++ +  + Y
Sbjct: 328 GIIGVNLVLTLVY 340


>gi|311744212|ref|ZP_07718016.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Aeromicrobium marinum DSM 15272]
 gi|311312385|gb|EFQ82298.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Aeromicrobium marinum DSM 15272]
          Length = 279

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 52/256 (20%), Positives = 104/256 (40%), Gaps = 10/256 (3%)

Query: 120 KFINDSCSQAHILG-LVISNTGEFCASSYKFKGFLLSLIRQMYYV--GVSGV-------P 169
            F+ +   +   LG  +I        +    + +   + + +  V  GV G+        
Sbjct: 10  AFVTERRRRVETLGDQLIFYVKALAWTPRTVRLYRKEISKTLAEVVFGVGGISVIAGTVG 69

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V+  ++F  G  +   G   LS+ G   F+  + +    RE+  L+ A+ +A   G    
Sbjct: 70  VIAFLAFFAGTGVGLNGYAALSEIGVAKFTAFISAYFNTREVAPLVAAIALAATVGCGYT 129

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A +G+M+I+EEIDA+  MG+  +  L++ R+ A  I++  L  +A  ++ +   ++    
Sbjct: 130 ARLGAMRISEEIDALEVMGVPSLPFLVTTRMIAAFIAVIPLYSVALVASYLAPRLITTLI 189

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
           Y      +   F       +I     K   +A  I ++    G+        +G+ V   
Sbjct: 190 YGESAGTYDHYFIQFLPPGDILWSFFKLAVLAVGIILIHCYYGYTASDGPAGVGRAVGRA 249

Query: 350 VVQSISIVIIIDSLFA 365
           +  SI  V++ D    
Sbjct: 250 IRTSIVFVVVTDFFLT 265


>gi|149370868|ref|ZP_01890463.1| hypothetical protein SCB49_04265 [unidentified eubacterium SCB49]
 gi|149355654|gb|EDM44212.1| hypothetical protein SCB49_04265 [unidentified eubacterium SCB49]
          Length = 245

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 53/240 (22%), Positives = 98/240 (40%), Gaps = 2/240 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G       +      K       + +++  + +  + +V  ISF  G VI  Q A  L+
Sbjct: 7   IGSYFLMLKKVFGGFTKGSVLRELIFKEIDDLVIGSLGIVAFISFFVGGVITIQTALNLT 66

Query: 192 QFGAE-IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
                            + E      ++++AG+ GS I + IGSM++ E+IDA+  MG++
Sbjct: 67  NPLIPKSLIAYATRQSIILEFAPTFMSIIMAGKVGSFITSSIGSMRVTEQIDALEVMGIN 126

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
            +  L+ P+I A++   PL+  LA F  I+G  I            F      T    ++
Sbjct: 127 SLNYLVFPKIVAMMF-YPLVIALAMFLGIVGGYIAGVYGGFTNSTDFGIGLRDTFEPFHL 185

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               +K    A  I  V   +GF +   +  +GK  T   V +  ++I+ + +      +
Sbjct: 186 VYAFVKTFIFAFIIATVPSWQGFYMKGGALEVGKASTNSFVWTSVLIILANYIVTQLLLS 245


>gi|326331672|ref|ZP_08197960.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
 gi|325950471|gb|EGD42523.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
          Length = 277

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 45/208 (21%), Positives = 96/208 (46%)

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           VG   + V++L+S   G  +  +G   L   G       + +    RE+G L+ A+ +  
Sbjct: 61  VGGGTIGVMVLLSVSVGTSLGIEGFNGLELVGLAPLVGFISATANTRELGPLVAALALGA 120

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           + G    A++G+M++NEE+DA+  M +  V  L++ R+ A ++++  L ++    + I +
Sbjct: 121 QVGCRFTAQLGAMRVNEEVDALEVMSVRPVNYLVATRLVATMLAIVPLYVIGLLGSYIAS 180

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
              +   +      F   F    T+ +I   LIK    A  + ++    G AV   S ++
Sbjct: 181 ESTVVMLFGQSPGQFDHYFLEFLTMRDIGFSLIKILIFAAIVVLIHCWYGLAVSAGSLNV 240

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G+     +  S  ++++++ L  +  + 
Sbjct: 241 GEATGRSIRASFVVIVVLNMLLTVAMWG 268


>gi|326330430|ref|ZP_08196738.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
 gi|325951705|gb|EGD43737.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
          Length = 287

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 55/253 (21%), Positives = 113/253 (44%), Gaps = 2/253 (0%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   +D  S    LG +     +   S    + +   ++RQ   + +    ++  +  + 
Sbjct: 27  MGGYSDGSSLIADLGGIALFGIQIVKSMPDVRHYGTEVLRQAGIIILKSTFIIWFMMCML 86

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
            A IA +  + L+Q GA  ++    S      +   +   +++ +    +VAE+GSM+I+
Sbjct: 87  AAEIALEAHYLLAQLGAGGYTAVFSSTADYT-VAPEMWGWILSAKVACGLVAELGSMRIS 145

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN-FSAIIGASIVIWKYYDIPFAVF 297
           EEIDA+  MG+D    L++ R+ A++I  P + +       I+G  + ++ ++ +    +
Sbjct: 146 EEIDALDVMGIDSRAYLVNTRVLAMVIVTPFMFVAGTGLMYILGYYMNVYLFHSVSAGGY 205

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            S F S     ++   LI+A  M   I +V    GF        +GK     +V ++ IV
Sbjct: 206 LSVFWSFTAQQDLILSLIQATIMGLLIVLVGCYYGFNASGGPVGVGKATAKSMVINLVIV 265

Query: 358 IIIDSLFAIFYFA 370
             + ++F   +F 
Sbjct: 266 SALGAVFQQLFFG 278


>gi|118466063|ref|YP_881276.1| TrnB1 protein [Mycobacterium avium 104]
 gi|254774784|ref|ZP_05216300.1| TrnB1 protein [Mycobacterium avium subsp. avium ATCC 25291]
 gi|118167350|gb|ABK68247.1| TrnB1 protein [Mycobacterium avium 104]
          Length = 255

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 54/239 (22%), Positives = 107/239 (44%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG     + E  A++ +       ++ Q+++V    +   I++S     +I      
Sbjct: 10  MTALGQFFLLSAEALAAAVRGPWAWREILEQIWFVARVSIFPTIMLSIPYTVLIVFVLNI 69

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L + GA   S     +  + ++G ++TA++++G   +A+ A++G+  I EEIDA++ +G
Sbjct: 70  LLVEIGAGDLSGAGAGLASVTQVGPVVTAMVVSGAGSTAMCADLGARTIREEIDAMKVIG 129

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ V+ L+ PRI A      +L  +   + + G+ I +     +    F +       L 
Sbjct: 130 VNPVQALVVPRIIAATFVAVMLYAVVAVTGLTGSYIFVVFVQHVTPGAFVAGMTLVTGLP 189

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   LIKA     + G++A  +G +VG     +G  V   VV S   +  I+ L    
Sbjct: 190 QVVISLIKATLFGLSAGLIACYKGLSVGGGPTGVGNAVNETVVFSFMALFFINILTTAL 248


>gi|298208113|ref|YP_003716292.1| hypothetical protein CA2559_07665 [Croceibacter atlanticus
           HTCC2559]
 gi|83850754|gb|EAP88622.1| hypothetical protein CA2559_07665 [Croceibacter atlanticus
           HTCC2559]
          Length = 233

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 50/216 (23%), Positives = 100/216 (46%), Gaps = 2/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE-IFSIDLMSILQLREIGVL 214
           +++++  + +S + +V  ISF  GAV++ Q A  L+                 + E    
Sbjct: 19  ILKEIDDLIMSSLGIVTFISFFIGAVVSIQTALNLNNPLIPKELIGFAARQSIILEFAPT 78

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
             +V++AG+ GS I + IG+M++ E+IDA+  MG++ +  L+ P+I A++I  P L  +A
Sbjct: 79  FISVIMAGKVGSYITSSIGTMRVTEQIDALEVMGINSLNYLVLPKIVAMMI-YPFLIGIA 137

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
            F  I+GA +       +  + F S         ++    +K    A  +  V    G+ 
Sbjct: 138 MFIGILGAYMAGVYGGFLGSSEFLSGLQDDFISFHLVYAFLKTFLFAFILATVPAYHGYY 197

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +   +  +G+  T   V +  ++II + +      +
Sbjct: 198 MKGGALEVGQASTQSFVWTSVVIIITNYVLTQVLLS 233


>gi|41408215|ref|NP_961051.1| hypothetical protein MAP2117c [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41396570|gb|AAS04434.1| hypothetical protein MAP_2117c [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 255

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 54/239 (22%), Positives = 106/239 (44%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG     + E  A++ +       ++ Q+++V    +   I++S     +I      
Sbjct: 10  MTALGQFFLLSAEALAAAVRGPWAWREILEQIWFVARVSIFPTIMLSIPYTVLIVFVLNI 69

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L + GA   S     +  + ++G ++TA++++G   +A+ A++G+  I EEIDA++ +G
Sbjct: 70  LLVEIGAGDLSGAGAGLASVTQVGPVVTAMVVSGAGSTAMCADLGARTIREEIDAMKVIG 129

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ V+ L+ PRI A      +L  +     + G+ I +     +    F +       L 
Sbjct: 130 VNPVQALVVPRIIAATFVAVMLYAVVAVIGLTGSYIFVVFVQHVTPGAFVAGMTLVTGLP 189

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   LIKA     + G++A  +G +VG     +G  V   VV S   +  I+ L    
Sbjct: 190 QVVISLIKATLFGLSAGLIACYKGLSVGGGPTGVGNAVNETVVFSFMALFFINILTTAL 248


>gi|312138208|ref|YP_004005544.1| integral membrane protein yrbe2a [Rhodococcus equi 103S]
 gi|311887547|emb|CBH46859.1| putative integral membrane protein YrbE2A [Rhodococcus equi 103S]
          Length = 275

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 47/243 (19%), Positives = 101/243 (41%), Gaps = 4/243 (1%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +      +         +  ++ + F    + Q ++V    +   +L++     +++ 
Sbjct: 30  LRAAGGFFAMSADTLRAVFSRPFQRREF----VDQAWFVARVSMVPTVLVAIPFTVLVSF 85

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                L + GA   S    ++  + ++G ++T +++AG   +AI A++ +  I EEIDA+
Sbjct: 86  TINILLREIGAADLSGAGAALGAVTQVGPIVTVLIVAGAGATAICADLAARTIREEIDAM 145

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R +G++ +  L+ PR+ A  +   LL  L     I+G  +      D+    F +     
Sbjct: 146 RVLGINPIHRLVVPRVLASTVVALLLNGLVCTIGILGGFLFSVYVQDVNPGAFVNGITLL 205

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
                +   ++KA       G++A   G  V   + S+G  V   VV S   + +++ L 
Sbjct: 206 TGFGELMISMLKAGLFGMIAGLMAAYLGMNVRGGAKSVGDAVNQTVVFSFMALFVVNVLV 265

Query: 365 AIF 367
              
Sbjct: 266 TAV 268


>gi|54027606|ref|YP_121848.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54019114|dbj|BAD60484.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 287

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 50/277 (18%), Positives = 110/277 (39%), Gaps = 6/277 (2%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
           S +          + +     ++      H +   + + G    +  ++   +  L+  +
Sbjct: 3   STYVPPLLRPLQQLKRSAQAPVDLIARIGHQVFFFLRSVGSIPLALKQYPKEVWRLLTDV 62

Query: 161 ------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
                   VG   + VV+++S   G  +  QG   L+  G    +  + +    RE+G L
Sbjct: 63  TWGNGNLVVGGGTIGVVVILSAFGGMTVGIQGHTSLNLLGLSPITGAISAFATTRELGPL 122

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           L ++  A ++G    A++G+M+I+EEIDA+ ++ +  +  L+S R++A I+++  L  L 
Sbjct: 123 LASLAFAAQAGCRFTAQLGAMRISEEIDALESVAIRPLPYLVSTRMFAAIVAIVPLYCLG 182

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
              A I  ++ +    D     +   F+      ++   L+KA         +    GF 
Sbjct: 183 LAVAYISCALTVQLVGDTAEGTYQHYFYQFLIPTDVLYSLLKAILFVAITTFIQCYYGFF 242

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
                  +G      +   I +V+  D    +  + +
Sbjct: 243 ASGGPEGVGVAAGRAIKMCIILVVFADLFMTLAIWGV 279


>gi|193215869|ref|YP_001997068.1| hypothetical protein Ctha_2170 [Chloroherpeton thalassium ATCC
           35110]
 gi|193089346|gb|ACF14621.1| protein of unknown function DUF140 [Chloroherpeton thalassium ATCC
           35110]
          Length = 264

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 70/247 (28%), Positives = 126/247 (51%), Gaps = 3/247 (1%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
               +G+ +   +    +       VI++  +F   +       L L+RQ+ + G   + 
Sbjct: 7   FLEQLGQNVRSSLRAYITFLSFAAAVIASFPKFFKQTQ---VGYLVLLRQVLFTGYEALS 63

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +V+LIS   G +I  +G   L+ FG       ++  +  RE+  LLTA +I  RSG+AI 
Sbjct: 64  IVVLISVSIGGLIILEGYSILANFGQSDLLYVILVSVITRELSNLLTAFIIVARSGTAIA 123

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
            E+G+M +N EIDA+ ++G+  +  L+ PR   +++SL +L +  N + I+G  +V   +
Sbjct: 124 TELGNMVVNHEIDALLSIGISPISYLVVPRTIGVVVSLLVLNVYFNITGILGGWMVSNWF 183

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
           Y I F VFFS+  +  TL +I   ++K+     AI I++   G  V   S  + ++    
Sbjct: 184 YPIDFNVFFSKLLAKLTLVDISASILKSMLFGFAIAIISSFHGLQVNFASTEVPQRTIRA 243

Query: 350 VVQSISI 356
           VV S+++
Sbjct: 244 VVYSLTM 250


>gi|240170399|ref|ZP_04749058.1| hypothetical protein MkanA1_13895 [Mycobacterium kansasii ATCC
           12478]
          Length = 247

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 104/240 (43%), Gaps = 1/240 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G + + + +     ++        + Q ++V    +   +L++     +++     
Sbjct: 1   MQAVGGLFAMSADAIKFVFRRPFQWREFLEQSWFVARVSMAPTLLVAIPFTVLVSFTLNI 60

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L + GA   S    +   + ++G L+T +++AG   +A+ A++GS  I EEIDA+  +G
Sbjct: 61  LLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEIDAMEVLG 120

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ V+ L++PR+ A  +   LL  L     I+G  +      D+    F +       + 
Sbjct: 121 INPVQRLVTPRMLASGLVALLLNSLVVIIGILGGYVFSVFVQDVNPGAFAAGITLLTGVP 180

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAV-GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +    +KA       G+VA   G  V G  + ++G  V   VV +   + +++ +    
Sbjct: 181 EVIISCVKAALFGLIAGLVACYRGLTVSGGGAKAVGNAVNETVVYAFMSLFVVNVVVTAI 240


>gi|86143923|ref|ZP_01062291.1| hypothetical protein MED217_03715 [Leeuwenhoekiella blandensis
           MED217]
 gi|85829630|gb|EAQ48093.1| hypothetical protein MED217_03715 [Leeuwenhoekiella blandensis
           MED217]
          Length = 245

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 47/240 (19%), Positives = 94/240 (39%), Gaps = 2/240 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +GL             K       +++++  + +  + +V  ISF  G V+A Q A  + 
Sbjct: 7   IGLYFMMLKGVFIKPTKTSVLRNLVLKEIDDLIIGSLGIVCFISFFVGGVVAIQTALNMD 66

Query: 192 Q-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
                +           + E      ++++AG+  S I + IG+M++ E+IDA+  MG++
Sbjct: 67  NPILPKSLIGFASRQSIILEFAPTFISIIMAGKVSSFITSSIGTMRVTEQIDALEVMGIN 126

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
            +  L+ P+I A++   P +  +A F  I+G               F            +
Sbjct: 127 SLNYLVFPKIIAMLF-YPFVIAIAMFLGILGGYTAAVLGGFATGDQFIQGLQEDFVPFQL 185

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               IK    A  +  +    G+ +   +  +GK  TT  V +   +I+ + L      +
Sbjct: 186 VYAFIKTFVFAILLATIPSYFGYYMKGGALEVGKASTTSFVWTSVFIILSNYLITQLLLS 245


>gi|163786261|ref|ZP_02180709.1| hypothetical protein FBALC1_13787 [Flavobacteriales bacterium
           ALC-1]
 gi|159878121|gb|EDP72177.1| hypothetical protein FBALC1_13787 [Flavobacteriales bacterium
           ALC-1]
          Length = 245

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 96/231 (41%), Gaps = 2/231 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
            H +G       +      K+      +++ +  + +  + +V  I+F  G V+A Q + 
Sbjct: 4   LHNIGAYFIMIKDIFRKPTKWSVMKTLILKDIDDLIIGSLGIVAFIAFFVGGVVAIQTSL 63

Query: 189 QLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            ++      +          + E      ++++AG+ GS I + IG+M++ E+IDA+  M
Sbjct: 64  NINNPLIPKYLVGFATRQSIILEFAPTFISIIMAGKVGSFITSSIGTMRVTEQIDALEVM 123

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++ +  L+ P+  AL +  P +  +A F  ++G  +            +     +    
Sbjct: 124 GINAINYLVFPKFIALTL-YPFVISIAMFLGVLGGMVACVYGGYGTLEDYIQGIQTDFIP 182

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
            +I    IK    A  +  +    G+ +   +  +GK  TT  V +  ++I
Sbjct: 183 FHIVYAFIKTLVFAFILATIPSFYGYFMKGGALEVGKASTTSFVWTSVVII 233


>gi|331699195|ref|YP_004335434.1| hypothetical protein Psed_5448 [Pseudonocardia dioxanivorans
           CB1190]
 gi|326953884|gb|AEA27581.1| protein of unknown function DUF140 [Pseudonocardia dioxanivorans
           CB1190]
          Length = 280

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 107/269 (39%), Gaps = 6/269 (2%)

Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY----- 162
                   + +   ++        L L          +  +++G +  L+ ++ +     
Sbjct: 3   TAFGTRTRRALRGPLDQLAELGDQLSLYARAIAWIPRTVRRYRGEIARLLAEVSFGSGAL 62

Query: 163 -VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221
            V +    V+  +S   G+++  QG   L   G E  +  + +    R+I  L+ A  + 
Sbjct: 63  IVILGTAGVMAALSLFVGSLVGLQGFRALDSLGVEALTGFITAYFNTRDIAPLVAASALT 122

Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281
              G+   A++G+M+I+EE+DA+  M +  V  L++ R+ A +I++  +  +   ++ + 
Sbjct: 123 ATLGAGFTAQLGAMRISEEVDALEVMAVPSVPFLVTTRVIAGMIAVIPMYTIGLLASFVA 182

Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341
           + + +     +P   +   F     ++++    +K    +  I ++    G+        
Sbjct: 183 SRLNVTVVNGLPGGTYDHYFDLFLPVSDVLFSYLKVIVFSVVIILIHCHYGYRAKGGPAG 242

Query: 342 LGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +G  V   V  SI    ++D    +  + 
Sbjct: 243 VGVAVGRAVRLSIVSTAVLDFFLTLVIYG 271


>gi|312137895|ref|YP_004005231.1| integral membrane protein yrbe1a [Rhodococcus equi 103S]
 gi|311887234|emb|CBH46543.1| putative integral membrane protein YrbE1A [Rhodococcus equi 103S]
          Length = 258

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 55/247 (22%), Positives = 110/247 (44%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           +    +++G  +        +  + +  L   ++Q  ++G       +L+    G  +A 
Sbjct: 5   ALQGGYLIGFSVQAMVSLARALLRGRLSLEETVKQTLFIGRVSTGPSLLLMVPIGVFVAV 64

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                  + GA  +S  +++ + + +   L+ A+M+AG +GSAI  ++GS KI EEIDA+
Sbjct: 65  SVGELAGRIGAGGYSGAVVAFIIVGQASALVCALMMAGVAGSAICTDLGSRKIREEIDAM 124

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+D V  L++PR+ A ++    L  +  F  ++   +       +P   F + F   
Sbjct: 125 EVMGIDVVERLVAPRLLAAVVVSVALCAMVTFGGVMACYLYHIYVQHLPAGTFLATFGQY 184

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
              A+    L+KA   A    +VA  +G         +   V   VV + ++V ++++  
Sbjct: 185 GRTADFVMALVKAAIFALTSTLVATFKGLHAKGGPRGVADAVNEAVVIAFALVFVVNTAL 244

Query: 365 AIFYFAI 371
           +  Y  I
Sbjct: 245 SALYTVI 251


>gi|326383822|ref|ZP_08205507.1| hypothetical protein SCNU_12842 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326197586|gb|EGD54775.1| hypothetical protein SCNU_12842 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 286

 Score =  166 bits (422), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 47/274 (17%), Positives = 111/274 (40%), Gaps = 10/274 (3%)

Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYV--- 163
            ++   + +     ++ + S     G  ++       +  +    +   +IRQ+  V   
Sbjct: 4   ADVSARVERGYRNRMDTAVSGLVRFGEYVTFVVRAVRAVPFTLIHYRKHVIRQIAEVTFG 63

Query: 164 ------GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
                 G   + +V+ +S    A++  +    L   G    S  L +I   RE+  ++ A
Sbjct: 64  NKSLLSGGGTIGIVLAMSLAAAAMLGIETYRGLQLVGMTSMSGMLAAIANTRELAPVVVA 123

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           + +A + G+   A+IG+M+I++EI A+  M +  V  L + R+ A ++ +  + ++   +
Sbjct: 124 IALAAKVGTGFTAQIGAMRISDEIAALDAMAIRSVPFLATTRMIAAMVCVLPIYMVGLLA 183

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           + +   +V+  Y+      +   FH   T  ++     KA   A  + +V    G+    
Sbjct: 184 SYVATRLVVVWYHGESSGTYDYFFHLALTPTDLLYSATKAVVFAAIVTLVHCSYGYFASG 243

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
               +G+     +  SI  + + D +     + +
Sbjct: 244 GPEGVGQAAGRALRTSILSIGVFDVILTFGLWGL 277


>gi|163754162|ref|ZP_02161285.1| hypothetical protein KAOT1_21107 [Kordia algicida OT-1]
 gi|161326376|gb|EDP97702.1| hypothetical protein KAOT1_21107 [Kordia algicida OT-1]
          Length = 233

 Score =  166 bits (421), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 96/232 (41%), Gaps = 2/232 (0%)

Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198
                +   K+      + + +  + +  + +V  ISF  G V++ Q A  ++      +
Sbjct: 2   LQSVFSKMTKWSMLRKLIFKDIDDLIIGSMGIVCFISFFVGGVVSIQTALNMNNPLIPKY 61

Query: 199 -SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
                     + E      ++++AG+ GS I + IG+M++ E+IDA+  MG++ +  L+ 
Sbjct: 62  LVGFATRQSVILEFAPTFISIIMAGKVGSFITSSIGTMRVTEQIDALEVMGVNSLNYLVF 121

Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
           P+I AL +  P +  +A F  I G  +          A F           ++    IK 
Sbjct: 122 PKIIALSL-YPFVITIAMFLGIFGGWLASIYGGFSTSADFIQGLQIEFIPFHVTYAFIKT 180

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              A  +  +    G+ +   +  +GK  TT  V +  ++I+I+ L      
Sbjct: 181 FVFAFVLATIPSFYGYYMKGGALEVGKASTTSFVWTSVVIILINYLITQLLL 232


>gi|169628106|ref|YP_001701755.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169240073|emb|CAM61101.1| Putative YrbE family protein [Mycobacterium abscessus]
          Length = 285

 Score =  166 bits (421), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 51/276 (18%), Positives = 111/276 (40%), Gaps = 7/276 (2%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
           S +          I  ++ K +             I+         + +K FL  L    
Sbjct: 4   STYVPPIARPFVGIYNRVQKPVTRLGHMVAFFFRAIAGVPIVLR--HYWKEFLRHLSDIA 61

Query: 161 Y-----YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +      VG     V+I++  + G ++A +G   L   G    +  + S++  RE+  ++
Sbjct: 62  WGNGSLVVGGGTAGVMIVLGVIAGGLVAIEGYNFLDLLGLGPATGIISSLVNTRELAPIM 121

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A+  A ++G    A++G+M+I+EEIDA+ ++ +  +  L++ R+ A I+    L +   
Sbjct: 122 AAIAFATQAGCRFTAQLGAMRISEEIDAMDSIAIRPIPYLVTTRLMAAIVVTIPLYVACL 181

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             + +   +++          +   F    +  +I   +IKA         +    GF  
Sbjct: 182 AVSYLSCQVMVGIMSGGSIGSYLHYFGIGVSGIDIVYSVIKAIIFVWIASTIQCYYGFYA 241

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
                 +G      +  +I++VIII+ L  +  +++
Sbjct: 242 SGGPEGVGVAAGHAMRAAITLVIIINMLLTMALWSV 277


>gi|326382401|ref|ZP_08204093.1| hypothetical protein SCNU_05666 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326199131|gb|EGD56313.1| hypothetical protein SCNU_05666 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 245

 Score =  166 bits (421), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 50/218 (22%), Positives = 104/218 (47%)

Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209
           +     ++ Q ++V        IL++   G +++ Q      Q GA   +     +  ++
Sbjct: 18  RFPFREVVVQTWFVITVTTLPAILVAIPFGVIVSVQVGSLTQQVGATSIAGAAGGLGIIQ 77

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
           +   ++TA+++ G +GSAI +++G+  + EEIDA+ T+GL+  R +++PR  A++I  P+
Sbjct: 78  QGAPIVTALLLGGAAGSAIASDLGARTVREEIDAMETLGLNPTRRVVAPRFVAVLIVAPM 137

Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329
           L +L  F+ ++   I+      I    + + F S A+ A+I   LIK+      +  +A 
Sbjct: 138 LCMLIVFTGLVAGYILSVNVQGITPGSYVASFASFASSADIVVALIKSVVFGLVVVAIAC 197

Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             G +       + + V   VV  +    +I+ +    
Sbjct: 198 HRGLSTKGGPKGVAESVNATVVLGVVACFVINVVITQL 235


>gi|325674886|ref|ZP_08154573.1| membrane protein YrbE4A [Rhodococcus equi ATCC 33707]
 gi|325554472|gb|EGD24147.1| membrane protein YrbE4A [Rhodococcus equi ATCC 33707]
          Length = 263

 Score =  166 bits (421), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 47/243 (19%), Positives = 101/243 (41%), Gaps = 4/243 (1%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +      +         +  ++ + F    + Q ++V    +   +L++     +++ 
Sbjct: 18  LRAAGGFFAMSADTLRAVFSRPFQRREF----VDQAWFVARVSMVPTVLVAIPFTVLVSF 73

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                L + GA   S    ++  + ++G ++T +++AG   +AI A++ +  I EEIDA+
Sbjct: 74  TINILLREIGAADLSGAGAALGAVTQVGPIVTVLIVAGAGATAICADLAARTIREEIDAM 133

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R +G++ +  L+ PR+ A  +   LL  L     I+G  +      D+    F +     
Sbjct: 134 RVLGINPIHRLVVPRVLASTVVALLLNGLVCTIGILGGFLFSVYVQDVNPGAFVNGITLL 193

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
                +   ++KA       G++A   G  V   + S+G  V   VV S   + +++ L 
Sbjct: 194 TGFGELMISMLKAGLFGMIAGLMAAYLGMNVRGGAKSVGDAVNQTVVFSFMALFVVNVLV 253

Query: 365 AIF 367
              
Sbjct: 254 TAV 256


>gi|54024947|ref|YP_119189.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54016455|dbj|BAD57825.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 287

 Score =  166 bits (421), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 55/248 (22%), Positives = 111/248 (44%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           + ++   +    + L +  T    A     +  L   + Q ++     +   ILIS   G
Sbjct: 30  RILSAVRTFGRTVRLGVRATVLAVADLAAGRFPLREAVVQAWFFASVSLLPAILISLPMG 89

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            VIA Q        GA   +  +  +  +++I  L  A+++ G   SAI +++G+  I E
Sbjct: 90  VVIAVQVGSLTENVGAGSMAGAVGGMGVMQQIAPLAAALLVGGAGASAIASDLGARTIRE 149

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDA+RTMG+D  R L++PR+ A+ +  P+L +L    +I+ + +V      +    ++ 
Sbjct: 150 EIDALRTMGIDPHRRLVAPRVVAMTVVAPMLAVLVILMSILASFLVASVGQGVAPGSYWL 209

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
            F S A++ ++   L K+      + ++A + G         +   V   VV  +   ++
Sbjct: 210 SFGSFASVTDLVICLGKSAVFGYLVAVIASQRGLQAQGGPKGVADCVNAAVVLGLLACLV 269

Query: 360 IDSLFAIF 367
           ++ +    
Sbjct: 270 VNLIITQI 277


>gi|169631107|ref|YP_001704756.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169243074|emb|CAM64102.1| Putative YrbE family protein [Mycobacterium abscessus]
          Length = 320

 Score =  166 bits (421), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 59/307 (19%), Positives = 130/307 (42%), Gaps = 4/307 (1%)

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
                +L+  +    +   + S +  +      P               I + +   ++ 
Sbjct: 4   VAADARLEPAADDWTETPDVESGSKSEDDHTSDPAAGALPQLLDRAPRLIKRPVAYAVSQ 63

Query: 125 SCSQAHILG----LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           + S    LG    LV+ +     +   + +      + Q +++    V   IL+S   G 
Sbjct: 64  TDSMLKTLGRYVDLVVQSFAFLISDIVRLRHPWQDTVIQSWFILTVTVVPAILVSIPFGV 123

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           ++A Q    +SQ GA   S     +  +++   ++ A+++ G +GSA+  ++G+  I EE
Sbjct: 124 IVAVQAGSIISQVGASSISGAAGGLGVIQQGAPIVAALLLGGAAGSAVATDLGARSIREE 183

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +DA+R MG++ V+ L++PR+ A++   PLL I   F  I    +V   +       + S 
Sbjct: 184 VDAMRVMGVNPVQRLVTPRLAAILFVSPLLCIFIIFVGIFAGYLVNVGFQGGTPGSYLSS 243

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
           F + A ++++   ++K       + +VA + G      +  +   V   VV  +  V+++
Sbjct: 244 FAAFANVSDVTVAVLKTWLFGVVVILVACQRGLEAKGGARGVADAVNATVVIGVVTVMVL 303

Query: 361 DSLFAIF 367
           +++    
Sbjct: 304 NTVITQI 310


>gi|41407947|ref|NP_960783.1| hypothetical protein MAP1849 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|254775059|ref|ZP_05216575.1| hypothetical protein MaviaA2_10356 [Mycobacterium avium subsp.
           avium ATCC 25291]
 gi|41396301|gb|AAS04166.1| hypothetical protein MAP_1849 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 286

 Score =  166 bits (420), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 57/236 (24%), Positives = 105/236 (44%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +     F       +      +RQ  ++  + V   IL+S      ++ Q A    Q GA
Sbjct: 45  VRTIQYFFYDLITGRFQWQEFVRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGA 104

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
              +     +  +R+   L+ AV++A   GSAI A++GS  + EE DA+  MG+  VR L
Sbjct: 105 TSLAGAASGLAVIRQGASLVAAVLMASAVGSAITADLGSRTMREETDAMEVMGVSVVRRL 164

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PR  A ++    LT +  F+    + +    + +     F S F S AT  ++   L+
Sbjct: 165 VVPRFAAAVMIGVALTGVVCFAGFFASYMFNVYFQNGAPGSFVSTFASFATTGDMILALL 224

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           KA      + IV+ ++G +       +   V   VV++I +++I++   +  Y  +
Sbjct: 225 KAIVFGAIVAIVSSQKGLSTKGGPTGVANSVNAAVVEAILLLMIVNVAISQLYIML 280


>gi|330875108|gb|EGH09257.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 148

 Score =  166 bits (420), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 39/146 (26%), Positives = 79/146 (54%), Gaps = 1/146 (0%)

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           SA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  IS+P+L ++ +   I GAS V
Sbjct: 1   SALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFSVVGIWGASWV 60

Query: 286 IWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
              +  +    F+S   ++ +   ++  G+IK+   A  +  +A+ +G+     S  + +
Sbjct: 61  AIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCEPTSEGISR 120

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370
             T  VV +   V+ +D +     F 
Sbjct: 121 ATTRTVVYASLAVLGLDFILTALMFG 146


>gi|54022502|ref|YP_116744.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54014010|dbj|BAD55380.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 263

 Score =  166 bits (420), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 49/230 (21%), Positives = 97/230 (42%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G     + +   +S +        I Q +++    +   +L++     +++     
Sbjct: 18  LRAVGGFFELSADVARASVRRPFQAREFIDQSWFIARVSIVPTLLVAIPFTVLVSFTLNI 77

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L + GA   S    +   + ++G ++T +++AG   +AI A++G+  I EEIDA+R +G
Sbjct: 78  LLREIGAADLSGAGAAFGAVTQVGPIVTVLIVAGAGATAICADLGARTIREEIDAMRVLG 137

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ V+ L+ PR+ A +    +L  L     I+G  +      D+    F +       L 
Sbjct: 138 INPVQRLVVPRVLASMFVALMLNSLVCTIGIVGGFLFSVYLQDVNPGAFVNGITLLTHLP 197

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
            +    +KA       G+VA   G  V     S+G  V   VV +   + 
Sbjct: 198 ELIISEVKAGLFGLIAGLVACYLGLNVKGGPKSVGDAVNQTVVFAFMALF 247


>gi|254819657|ref|ZP_05224658.1| hypothetical protein MintA_07029 [Mycobacterium intracellulare ATCC
           13950]
          Length = 280

 Score =  166 bits (420), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 105/236 (44%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +     F       +      +RQ  ++  + V   IL+S      ++ Q A    Q GA
Sbjct: 39  VRTVQYFFVDLITGRFQWHEFVRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGA 98

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
              +     +  +R+   L+ AV++A   GSAI A++GS  + EE DA+  MG+  +R L
Sbjct: 99  TSLAGAASGLAVIRQGASLVAAVLMASAVGSAITADLGSRTMREETDAMEVMGVSVIRRL 158

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PR  A ++    LT +  F+    + +    + +     F S F S AT  ++   L+
Sbjct: 159 VVPRFAAAVMIGVALTGVVCFAGFFASYMFNVYFQNGAPGSFVSTFASFATTGDMVLALL 218

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           KA      + IV+ ++G +       +   V   VV++I +++I++   +  Y  +
Sbjct: 219 KAIVFGAIVAIVSSQKGLSTKGGPTGVANSVNAAVVEAILLLMIVNVAISQLYIML 274


>gi|323436128|ref|ZP_01050723.2| ABC transporter, permease protein [Dokdonia donghaensis MED134]
 gi|321496443|gb|EAQ38641.2| ABC transporter, permease protein [Dokdonia donghaensis MED134]
          Length = 233

 Score =  165 bits (419), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 51/229 (22%), Positives = 96/229 (41%), Gaps = 2/229 (0%)

Query: 143 CASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE-IFSID 201
                K K     + +++  + +  + +V  ISF  G V+A Q A  L+           
Sbjct: 6   FVKPTKGKVLSDLIFKEIDDLIIGSLGIVAFISFFVGGVVAIQTALNLNNPLIPKSLIGF 65

Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261
                 + E      ++++AG+ GS I + IG+M++ E+IDA+  MG++ +  LI P+I 
Sbjct: 66  AARQSVILEFAPTFISIIMAGKVGSFITSSIGTMRVTEQIDALEVMGINSLNYLIFPKIV 125

Query: 262 ALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMA 321
           A+++  P +  +A F  IIGA              F S          +F    K    A
Sbjct: 126 AMLV-YPFVIAIAMFLGIIGAYTAAVYGGFTSNDAFLSGLQEDFIPFQLFYAFFKTFLFA 184

Query: 322 CAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             +  +    G+ +   +  +GK  TT  V +   +I+++ +      +
Sbjct: 185 FLLATIPSYHGYFMRGGALEVGKASTTSFVWTSVAIILVNFIVTQLLLS 233


>gi|120405106|ref|YP_954935.1| hypothetical protein Mvan_4152 [Mycobacterium vanbaalenii PYR-1]
 gi|119957924|gb|ABM14929.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 269

 Score =  165 bits (419), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 49/244 (20%), Positives = 102/244 (41%), Gaps = 5/244 (2%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +      + +          ++++ FL     Q ++V    +   +L++     +++ 
Sbjct: 23  MAAVGGFFSMALDAVRFVFVRPFQWREFL----EQCWFVARVSMAPTLLVAIPFTVLVSF 78

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                L + GA   S    +   + ++G L+T +++AG   +A+ A++GS  I EEIDA+
Sbjct: 79  TLNILLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEIDAM 138

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             +G++ V+ L++PR+ A  +   LL  L     I+G         D+    F +     
Sbjct: 139 EVLGINPVQRLVTPRMLAAGLVALLLNSLVVIIGILGGYFFSVFVQDVNPGAFAAGITLL 198

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             +  +    +KA       G+VA   G    G  + ++G  V   VV +   + +I+ +
Sbjct: 199 TGVPEVIISCVKAALFGLIAGLVACYRGLTITGGGAKAVGNAVNETVVYAFMALFVINVV 258

Query: 364 FAIF 367
               
Sbjct: 259 VTAI 262


>gi|308810118|ref|XP_003082368.1| unnamed protein product [Ostreococcus tauri]
 gi|116060836|emb|CAL57314.1| unnamed protein product [Ostreococcus tauri]
          Length = 361

 Score =  165 bits (419), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 48/210 (22%), Positives = 97/210 (46%), Gaps = 5/210 (2%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           KF+  + + A + G V+             +      ++Q+  VG   + V +L S   G
Sbjct: 105 KFLWRATATALLFGSVLY---RLVREPK--RVNWEQTLQQIARVGPQTLGVSLLTSSFVG 159

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V   Q   + ++ G +     L+ +   RE+  ++ A+++ GR GS+I AE+G+M++ E
Sbjct: 160 MVFTIQFCKEFAKVGLKNAIGGLLGLAFARELTPVICAIVLTGRIGSSIAAELGTMQVTE 219

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++D +  +G D V  L+ PR+ A  ISLP+L++L+   ++  + ++    Y +   V   
Sbjct: 220 QVDQLTVLGTDPVDYLVIPRVIACSISLPILSVLSFAQSLGASILLADLRYGVSPNVIID 279

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAM 329
                   ++I     K+      I  ++ 
Sbjct: 280 SVAKYVEPSDIGVMAAKSIAFGAVIAAISC 309


>gi|126662313|ref|ZP_01733312.1| hypothetical protein FBBAL38_03140 [Flavobacteria bacterium BAL38]
 gi|126625692|gb|EAZ96381.1| hypothetical protein FBBAL38_03140 [Flavobacteria bacterium BAL38]
          Length = 233

 Score =  165 bits (419), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 47/231 (20%), Positives = 100/231 (43%), Gaps = 2/231 (0%)

Query: 141 EFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF-S 199
           E      K+      +++++  + +  + +V  ISF  G V+A Q A  L+      F  
Sbjct: 4   EIFNKPTKWSVMKQLILKEVDDLIIGSLGIVSFISFFVGGVVAIQTALNLTNPLIPKFLI 63

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
                   + E      ++++AG+ GS I + IG+M++ E+IDA+  MG++ +  L+ P+
Sbjct: 64  GFATRQSVILEFAPTFISIIMAGKMGSFITSSIGTMRVTEQIDALEVMGVNSLNYLVFPK 123

Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319
           I AL++  P +  L+ F  + G  +            F +   +     +I    IK   
Sbjct: 124 IIALLL-YPFVIGLSMFLGVFGGWMAAVYGGFTTSFEFTTGLQTEFIPFHIAYAFIKTIV 182

Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            A  +  +    G+ +   +  +G+  T   V +  ++I+++ +      +
Sbjct: 183 FALLLATIPSFHGYYMKGGALEVGQASTVSFVWTSVVIILMNFILTQLLLS 233


>gi|108798492|ref|YP_638689.1| hypothetical protein Mmcs_1522 [Mycobacterium sp. MCS]
 gi|119867593|ref|YP_937545.1| hypothetical protein Mkms_1545 [Mycobacterium sp. KMS]
 gi|108768911|gb|ABG07633.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
 gi|119693682|gb|ABL90755.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
          Length = 271

 Score =  165 bits (418), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 50/243 (20%), Positives = 107/243 (44%), Gaps = 4/243 (1%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +      + +          + ++ FL     Q ++V    +   ++++     ++  
Sbjct: 27  IRALGGFFAMALDTLVTIPRRPFAWREFL----EQSWFVARVSLVPTLMLAIPFTVLLIF 82

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                L +FGA  F+    +   + +IG ++T +++AG   +A+ A++G+  I +E+DA+
Sbjct: 83  TFNILLLEFGAADFAGTGAAYGTVTQIGPVVTVLVVAGAGATAMCADLGARTIRDELDAL 142

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R MG+D ++ L+ PR+ A  +   LL+ +     ++G          +    F S     
Sbjct: 143 RVMGVDPIQTLVVPRVLAATVVATLLSSVVILVGLVGGFAFSVFVQHVTPGAFISGLTVI 202

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            + A++   LIKA     A G++A  +G +VG     +G  V   VV +   +  I+ + 
Sbjct: 203 TSAADVVISLIKAALFGLAAGLIACYKGISVGGGPAGVGNAVNETVVFTFVALFAINIIA 262

Query: 365 AIF 367
           +  
Sbjct: 263 SAV 265


>gi|295135743|ref|YP_003586419.1| ABC-type transporter permease protein [Zunongwangia profunda
           SM-A87]
 gi|294983758|gb|ADF54223.1| ABC-type transporter permease protein [Zunongwangia profunda
           SM-A87]
          Length = 225

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 49/216 (22%), Positives = 98/216 (45%), Gaps = 2/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI-LQLREIGVL 214
           + +++  + +  + +V  +SF  GAV+A Q A  L+        +   +    + E    
Sbjct: 11  IFKEIDELIIGSLGIVCFLSFFIGAVVAIQTALNLNNPLIPKSLVAFAARQSVILEFSPT 70

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
             ++++AG+ GS I + IGSM++ E+IDA+  MG++    LI P+I A +++ P +  ++
Sbjct: 71  FISIIMAGKVGSFITSSIGSMRVTEQIDALEVMGINSKNYLIFPKIIA-MLTYPFVIAIS 129

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
            F  I+GA +       +    F S         ++    IK    A  +  V    G+ 
Sbjct: 130 MFLGILGAYVAAVLGGFVKPDDFVSGLQDDFVTFHLIYAFIKTFLFAFILATVPAYHGYY 189

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +   +  +G+  TT  V +  ++II +        +
Sbjct: 190 MKGGALEVGQASTTAFVWTSVVLIITNYATTQLLLS 225


>gi|226364205|ref|YP_002781987.1| YrbE family protein [Rhodococcus opacus B4]
 gi|226242694|dbj|BAH53042.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 254

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 101/239 (42%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G   + +GE   + +         + Q ++V    +   +L++     +++     
Sbjct: 9   LRAVGGFFTMSGETLRAVFSRPFQRREFVDQAWFVARVSMVPTVLVAIPFTVLVSFTINI 68

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L + GA   S    ++  + ++G ++T +++AG   +AI A++ +  I EEIDA+R +G
Sbjct: 69  LLREIGAADLSGAGAALGTVTQVGPIVTVLIVAGAGATAICADLSARTIREEIDAMRVLG 128

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ +  L+ PR+ A  +   LL  L     I+G  +      D+    F +         
Sbjct: 129 INPIHRLVVPRVLASTVVALLLNGLVCTIGILGGFVFSVYIQDVNPGAFVNGITLLTGFG 188

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +    +KA       G+VA   G  V   + S+G  V   VV S   + +++ L    
Sbjct: 189 ELVISEVKAGLFGMIAGLVAAYLGLNVKGGAKSVGDAVNQTVVFSFMALFVVNVLVTAV 247


>gi|118469944|ref|YP_887173.1| hypothetical protein MSMEG_2853 [Mycobacterium smegmatis str. MC2
           155]
 gi|118171231|gb|ABK72127.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
           155]
          Length = 270

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 104/246 (42%), Gaps = 1/246 (0%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
             + +    +G + + + +    +++        + Q ++V    +   +L++     ++
Sbjct: 18  GGTSTTLEAIGGLFAMSSDAVRFAFRRPFQGREFLEQSWFVARVSLAPTLLVAIPFTVLV 77

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           +      L + GA   S    +   + ++G ++T +++AG   +A+ A++GS  I +EID
Sbjct: 78  SFTLNILLRELGAADLSGAGAAFGAVTQVGPMVTVLIVAGAGATAMCADLGSRTIRDEID 137

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +G++ ++ L++PRI A  +   LL  L     I+G          +    F +   
Sbjct: 138 AMEVLGINPIQRLVTPRILASGLVALLLNSLVVIIGILGGYTFSVFIQGVNPGAFAAGIT 197

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISIVIIID 361
               +  +    IKA       G+VA   G    G  + ++G  V   VV +   + +++
Sbjct: 198 LLTGVPEVIISCIKAMLFGFIAGMVACFRGLTIAGGGAKAVGNAVNETVVYAFMALFVVN 257

Query: 362 SLFAIF 367
            +    
Sbjct: 258 VVVTAI 263


>gi|261415551|ref|YP_003249234.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261372007|gb|ACX74752.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 292

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 60/275 (21%), Positives = 118/275 (42%), Gaps = 14/275 (5%)

Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162
                  L + +G  I+K          ++ L +         S+ FK    ++I Q ++
Sbjct: 11  KMTPVGRLFHTLGIFILK-----TRMGQLIALFLRTVASLFDKSHNFKSDSRNIILQTFF 65

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
            GV   P +  ++ + G V+       + + G       L+ ++ +RE+  + TA +IAG
Sbjct: 66  TGVEIFPPLFAVATLFGTVVIIYLFSLMGKMGFSNNIGFLIVVIIIRELSPIFTAFLIAG 125

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           R+GS++   IGSM IN E+DA+ TMG++ +R L+ P +    I++ ++ I+ + SAI   
Sbjct: 126 RTGSSLTTYIGSMVINSEVDALATMGINPIRYLVMPSVIGGTIAMIIMNIIFSTSAIGAG 185

Query: 283 SIVIWKYYDIPFAV--------FFSR-FHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
            ++      I            + S       T  +    ++K       I I A  +  
Sbjct: 186 FLLTKGIIFITGNAPNVQITWSYLSTEIIKALTKPDFVFAIVKPLIFGIIITINACYQAL 245

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
            +      + K  +  V+ S   ++  D+LF +++
Sbjct: 246 NIKRDIRQVPKATSRSVIMSFLYIVFTDALFLMYF 280


>gi|254441414|ref|ZP_05054907.1| conserved domain protein [Octadecabacter antarcticus 307]
 gi|198251492|gb|EDY75807.1| conserved domain protein [Octadecabacter antarcticus 307]
          Length = 551

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 72/198 (36%), Positives = 108/198 (54%), Gaps = 2/198 (1%)

Query: 99  QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158
                          IG      +          GL +S          +F+  L +L+ 
Sbjct: 10  PAPVVAGGLIEWVADIGSSTTNAVKFVLKLIGYFGLFLSRLARSIRHPKEFR--LTALVH 67

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
               VG+  VP+V L++F+ G V+A QG+ QL QFGAE+F +DL+++  LRE+G+LLT++
Sbjct: 68  HCQEVGLKAVPIVALMAFLIGVVLAFQGSTQLKQFGAEVFVVDLIAVYILRELGILLTSI 127

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++AGR+ SA  A IGSMK+ EEIDA+R++GLD   IL  PRI AL++ LP+L ++AN   
Sbjct: 128 IVAGRTASAFTAAIGSMKMREEIDAMRSLGLDPATILFVPRILALVLMLPILGLVANVMG 187

Query: 279 IIGASIVIWKYYDIPFAV 296
           + G  +      DI    
Sbjct: 188 LFGDPMAAQVPVDINGHT 205


>gi|126436761|ref|YP_001072452.1| hypothetical protein Mjls_4189 [Mycobacterium sp. JLS]
 gi|126236561|gb|ABN99961.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 285

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 59/261 (22%), Positives = 109/261 (41%), Gaps = 14/261 (5%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVI 172
           V       +QA      +    E       ++G  L +I QM        +    V +V 
Sbjct: 21  VAGWRRIGAQARFYAKTLGAMWEALV---YYRGETLRMIAQMGLGAGALAMIGGTVGIVG 77

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
            ++   G+++  QG   LS  G E  +  + + +  R +  L   + ++   G+   A++
Sbjct: 78  FLTLTAGSLVTIQGYSSLSDIGVEALTGFVSAYVNGRIVTPLTAVISLSATIGAGTTAQL 137

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           G+M+INEEIDA+  MG+  V  L S R+ A +I +  L  +A + + + A      YY  
Sbjct: 138 GAMRINEEIDALEVMGIRSVAYLASTRVIAGVIVVIPLYCIAVWMSFMSARFATTVYYGQ 197

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
              ++   F +    ++I   L +A  M   + +V    GF        +G+ V   V  
Sbjct: 198 ATGIYDHYFSTFLQPSDILWSLFQAVLMGFVVMLVHTYYGFTASGGPAGVGEAVGRAVRT 257

Query: 353 SISIVIIIDSLFAIFYFAIGI 373
           S+       ++F I + ++ I
Sbjct: 258 SLIA-----AVFVILFASLAI 273


>gi|215404242|ref|ZP_03416423.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           02_1987]
 gi|218753676|ref|ZP_03532472.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis GM
           1503]
 gi|253798988|ref|YP_003031989.1| hypothetical protein TBMG_02026 [Mycobacterium tuberculosis KZN
           1435]
 gi|254550984|ref|ZP_05141431.1| hypothetical protein Mtube_11066 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|297634533|ref|ZP_06952313.1| hypothetical protein MtubK4_10441 [Mycobacterium tuberculosis KZN
           4207]
 gi|253320491|gb|ACT25094.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis
           KZN 1435]
          Length = 269

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 47/253 (18%), Positives = 107/253 (42%), Gaps = 4/253 (1%)

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
           G+     +    +      + +  +       + ++ +LL    Q ++V        +L+
Sbjct: 14  GRVADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLL----QCWFVARVSTLPGVLM 69

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           +     +        L+  GA  FS    +I  + +   ++T +++AG   +A+ A++G+
Sbjct: 70  TIPWAVISGFLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGA 129

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
             I EE+DA+R MG++ ++ L +PR+ A       L  +   + +IGA         +  
Sbjct: 130 RTIREELDALRVMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSA 189

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
             + +   +     ++   +IKA       G++A  +G +VG     +G+ V   VV + 
Sbjct: 190 GAWVTGLTTLTHTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAF 249

Query: 355 SIVIIIDSLFAIF 367
            ++ +I+ +    
Sbjct: 250 IVLFVINIVVTAV 262


>gi|183983837|ref|YP_001852128.1| YrbE family protein, YrbE5A [Mycobacterium marinum M]
 gi|183177163|gb|ACC42273.1| YrbE family protein, YrbE5A [Mycobacterium marinum M]
          Length = 289

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 61/276 (22%), Positives = 116/276 (42%), Gaps = 5/276 (1%)

Query: 97  KPQRSFFYNSFKNLHYHIGKKIVKFIN-DSCSQAHILG----LVISNTGEFCASSYKFKG 151
           +P+ +   +   +    IG     ++     +    +G    L +     F       + 
Sbjct: 4   QPEPALLGSRNDDGVAAIGDWAAGYVRRHPLAALTTVGEQFVLGVRTIQYFFVDLVTGRF 63

Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211
                +RQ  ++  + V   IL+S      ++ Q A    Q GA   +     +  +R+ 
Sbjct: 64  QWQEFVRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGATSLAGAASGLAVIRQG 123

Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271
             L+ AV++A   GSAI A++GS  + EE DA+  MG+  +R L+ PR  A I+    LT
Sbjct: 124 ASLVAAVLMASAVGSAITADLGSRTMREETDAMEVMGVSVIRRLVVPRFAAAIMIGVALT 183

Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
            +  F     + +    + +     F + F S AT  ++F  L KA      + +V+ ++
Sbjct: 184 GVVCFVGFFASYMFNVYFQNGAPGSFVATFASFATTDDMFLALFKAVIFGAIVAVVSAQK 243

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           G +       +   V   VV+SI +++I++   +  
Sbjct: 244 GLSTKGGPTGVANSVNAAVVESILVLMIVNVSISQL 279


>gi|15609101|ref|NP_216480.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis H37Rv]
 gi|15841439|ref|NP_336476.1| hypothetical protein MT2016 [Mycobacterium tuberculosis CDC1551]
 gi|148661773|ref|YP_001283296.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis H37Ra]
 gi|167970514|ref|ZP_02552791.1| conserved hypothetical integral membrane protein YrbE3A
           [Mycobacterium tuberculosis H37Ra]
 gi|215411646|ref|ZP_03420442.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           94_M4241A]
 gi|215427323|ref|ZP_03425242.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis T92]
 gi|215430874|ref|ZP_03428793.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           EAS054]
 gi|215446167|ref|ZP_03432919.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis T85]
 gi|219557918|ref|ZP_03536994.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis T17]
 gi|254232134|ref|ZP_04925461.1| hypothetical integral membrane protein yrbE3A [Mycobacterium
           tuberculosis C]
 gi|254364783|ref|ZP_04980829.1| hypothetical integral membrane protein yrbE3A [Mycobacterium
           tuberculosis str. Haarlem]
 gi|260186935|ref|ZP_05764409.1| hypothetical protein MtubCP_13013 [Mycobacterium tuberculosis
           CPHL_A]
 gi|260201057|ref|ZP_05768548.1| hypothetical protein MtubT4_13279 [Mycobacterium tuberculosis T46]
 gi|289443448|ref|ZP_06433192.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis
           T46]
 gi|289447581|ref|ZP_06437325.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis
           CPHL_A]
 gi|289554259|ref|ZP_06443469.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis KZN
           605]
 gi|289570054|ref|ZP_06450281.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis
           T17]
 gi|289746097|ref|ZP_06505475.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           02_1987]
 gi|289750548|ref|ZP_06509926.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis
           T92]
 gi|289754061|ref|ZP_06513439.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
 gi|289758074|ref|ZP_06517452.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|289762119|ref|ZP_06521497.1| hypothetical integral membrane protein yrbE3A [Mycobacterium
           tuberculosis GM 1503]
 gi|294996886|ref|ZP_06802577.1| hypothetical protein Mtub2_20868 [Mycobacterium tuberculosis 210]
 gi|297731521|ref|ZP_06960639.1| hypothetical protein MtubKR_10546 [Mycobacterium tuberculosis KZN
           R506]
 gi|298525458|ref|ZP_07012867.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|306776196|ref|ZP_07414533.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu001]
 gi|306784727|ref|ZP_07423049.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu003]
 gi|306803683|ref|ZP_07440351.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu008]
 gi|306968080|ref|ZP_07480741.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu009]
 gi|306972305|ref|ZP_07484966.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu010]
 gi|307080016|ref|ZP_07489186.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu011]
 gi|307084590|ref|ZP_07493703.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu012]
 gi|308369573|ref|ZP_07418314.2| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu002]
 gi|308372102|ref|ZP_07427406.2| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu004]
 gi|308373284|ref|ZP_07431721.2| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu005]
 gi|308374452|ref|ZP_07436104.2| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu006]
 gi|308375733|ref|ZP_07444925.2| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu007]
 gi|313658854|ref|ZP_07815734.1| hypothetical protein MtubKV_10556 [Mycobacterium tuberculosis KZN
           V2475]
 gi|2950434|emb|CAA17837.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE3A
           [Mycobacterium tuberculosis H37Rv]
 gi|13881678|gb|AAK46290.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|124601193|gb|EAY60203.1| hypothetical integral membrane protein yrbE3A [Mycobacterium
           tuberculosis C]
 gi|134150297|gb|EBA42342.1| hypothetical integral membrane protein yrbE3A [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148505925|gb|ABQ73734.1| conserved hypothetical integral membrane protein YrbE3A
           [Mycobacterium tuberculosis H37Ra]
 gi|289416367|gb|EFD13607.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis
           T46]
 gi|289420539|gb|EFD17740.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis
           CPHL_A]
 gi|289438891|gb|EFD21384.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis KZN
           605]
 gi|289543808|gb|EFD47456.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis
           T17]
 gi|289686625|gb|EFD54113.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           02_1987]
 gi|289691135|gb|EFD58564.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis
           T92]
 gi|289694648|gb|EFD62077.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
 gi|289709625|gb|EFD73641.1| hypothetical integral membrane protein yrbE3A [Mycobacterium
           tuberculosis GM 1503]
 gi|289713638|gb|EFD77650.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|298495252|gb|EFI30546.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|308215376|gb|EFO74775.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu001]
 gi|308327131|gb|EFP15982.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu002]
 gi|308330567|gb|EFP19418.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu003]
 gi|308334401|gb|EFP23252.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu004]
 gi|308338197|gb|EFP27048.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu005]
 gi|308341892|gb|EFP30743.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu006]
 gi|308345381|gb|EFP34232.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu007]
 gi|308349684|gb|EFP38535.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu008]
 gi|308354314|gb|EFP43165.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu009]
 gi|308358256|gb|EFP47107.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu010]
 gi|308362184|gb|EFP51035.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu011]
 gi|308365841|gb|EFP54692.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu012]
 gi|323719529|gb|EGB28655.1| hypothetical protein TMMG_01225 [Mycobacterium tuberculosis
           CDC1551A]
 gi|326903571|gb|EGE50504.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis
           W-148]
 gi|328458743|gb|AEB04166.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis KZN
           4207]
          Length = 265

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 47/253 (18%), Positives = 107/253 (42%), Gaps = 4/253 (1%)

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
           G+     +    +      + +  +       + ++ +LL    Q ++V        +L+
Sbjct: 10  GRVADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLL----QCWFVARVSTLPGVLM 65

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           +     +        L+  GA  FS    +I  + +   ++T +++AG   +A+ A++G+
Sbjct: 66  TIPWAVISGFLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGA 125

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
             I EE+DA+R MG++ ++ L +PR+ A       L  +   + +IGA         +  
Sbjct: 126 RTIREELDALRVMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSA 185

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
             + +   +     ++   +IKA       G++A  +G +VG     +G+ V   VV + 
Sbjct: 186 GAWVTGLTTLTHTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAF 245

Query: 355 SIVIIIDSLFAIF 367
            ++ +I+ +    
Sbjct: 246 IVLFVINIVVTAV 258


>gi|15828391|ref|NP_302654.1| hypothetical protein ML2587 [Mycobacterium leprae TN]
 gi|221230868|ref|YP_002504284.1| hypothetical protein MLBr_02587 [Mycobacterium leprae Br4923]
 gi|13093821|emb|CAC32119.1| conserved membrane protein [Mycobacterium leprae]
 gi|219933975|emb|CAR72687.1| conserved membrane protein [Mycobacterium leprae Br4923]
          Length = 267

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 48/243 (19%), Positives = 100/243 (41%), Gaps = 4/243 (1%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                    +++          ++++ F+L    Q +++        +++S     ++  
Sbjct: 21  LVLVGGFFRMLVLTGKALFRRPFQWREFIL----QCWFIMRVAFLPTVMVSIPLTVLLIF 76

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                L+QF A   S    +I  + ++G L T +++AG   ++I A++G+  I EEIDA+
Sbjct: 77  TLNVLLAQFSAADLSGAGAAIGAVTQLGPLTTVLVVAGAGSTSICADLGARTIREEIDAM 136

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             +G+D +  L+ PR+ A  +   LL  L     ++G  +      ++    + +   + 
Sbjct: 137 EVLGIDPIHRLVVPRVLAATLVATLLNGLVITVGLVGGYLFGVYLQNVSGGAYLATLTTI 196

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L  +    +KA       G+V    G  V   SN LG  V   VV  +  +  ++ + 
Sbjct: 197 TGLPEVVIATVKAATFGLIAGLVGCYRGLIVRGGSNGLGAAVNETVVLCVVALYAVNVVL 256

Query: 365 AIF 367
              
Sbjct: 257 TTI 259


>gi|111023084|ref|YP_706056.1| hypothetical protein RHA1_ro06121 [Rhodococcus jostii RHA1]
 gi|110822614|gb|ABG97898.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
          Length = 286

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 53/256 (20%), Positives = 103/256 (40%), Gaps = 10/256 (3%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVSG------- 167
             +             LG   +  G   A        +   ++RQ+  +   G       
Sbjct: 11  HWVRARARQPLDLMTGLGREFTFYGSVIAGVPLAIVKYWRHIMRQIGDISFGGATLLAGG 70

Query: 168 --VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             + VV  +S V    +  +G   L   G    S  L +IL  RE+  ++ ++ +A + G
Sbjct: 71  GAIGVVFAMSAVAATQVGIEGLRGLDLLGMGSLSGLLSAILNTRELAPVIASIALAAKVG 130

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           +   A++G+M+I+EEI A+  M +  +  L S R+ + +I +  L ++   S+ + + +V
Sbjct: 131 TGFTAQLGAMRISEEISALDAMAIRSLPFLASTRLVSCLICVVPLYVVGLLSSYLASRLV 190

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
           I  +       +   FH   T  ++    +KA   A  I +V    G+        +G+ 
Sbjct: 191 IVTFGGQSAGTYDYYFHLMLTPTDVAYSFVKAVVFATIIALVHCSYGYHAHGGPEGVGRA 250

Query: 346 VTTCVVQSISIVIIID 361
               +  SI  + I+D
Sbjct: 251 AGRALRTSILAIGIVD 266


>gi|41410180|ref|NP_963016.1| hypothetical protein MAP4082 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|254776985|ref|ZP_05218501.1| hypothetical protein MaviaA2_20271 [Mycobacterium avium subsp.
           avium ATCC 25291]
 gi|41399014|gb|AAS06632.1| hypothetical protein MAP_4082 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 265

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 92/241 (38%), Gaps = 4/241 (1%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +        +          ++++      I Q +++    +   + ++     +I    
Sbjct: 21  AVGGFFRTCVLTGKALFRRPFQWR----ETIEQGWFITSVSLLPTLAVAIPLTVLIIFTL 76

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
              L++FGA   S    ++  + ++G L T ++IAG   +AI A++G+  I EEIDA+  
Sbjct: 77  NILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGSTAICADLGARTIREEIDALEV 136

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +G+D +  L+ PR+ A  I   LL        ++G  +       I    +         
Sbjct: 137 LGIDPIHRLVVPRVVAATIVATLLNGAVITIGLVGGFVFGVFIQHISAGAYVGTLTLITG 196

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L  +   ++K+       G+V    G         +G  V   +V  +  +  ++ +   
Sbjct: 197 LPEVVISVVKSATFGTIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFAVNVVLTT 256

Query: 367 F 367
            
Sbjct: 257 I 257


>gi|111021668|ref|YP_704640.1| hypothetical protein RHA1_ro04696 [Rhodococcus jostii RHA1]
 gi|110821198|gb|ABG96482.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
          Length = 254

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 101/239 (42%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G   + +GE   + +         + Q ++V    +   +L++     +++     
Sbjct: 9   LRAVGGFFTMSGETLRAVFSRPFQRREFVDQAWFVARVSMVPTVLVAIPFTVLVSFTINI 68

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L + GA   S    ++  + ++G ++T +++AG   +AI A++ +  I EEIDA+R +G
Sbjct: 69  LLREIGAADLSGAGAALGTVTQVGPIVTVLIVAGAGATAICADLSARTIREEIDAMRVLG 128

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ +  L+ PR+ A  +   LL  L     I+G  +      D+    F +         
Sbjct: 129 INPIHRLVVPRVLASTVVALLLNGLVCTIGILGGFVFSVYIQDVNPGAFVNGITLLTGFG 188

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +    +KA       G+VA   G  V   + S+G  V   VV S   + +++ L    
Sbjct: 189 ELVISEVKAGLFGMIAGLVAAYLGLNVRGGAKSVGDAVNQTVVFSFMALFVVNVLVTAV 247


>gi|118462658|ref|YP_881590.1| hypothetical protein MAV_2390 [Mycobacterium avium 104]
 gi|118163945|gb|ABK64842.1| conserved hypothetical protein [Mycobacterium avium 104]
          Length = 286

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 104/236 (44%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +     F       +      +RQ  ++  + V   IL+S      ++ Q A    Q GA
Sbjct: 45  VRTIQYFFYDLITGRFQWQEFVRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGA 104

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
              +     +  +R+   L+ AV++A   GSAI A++GS  + EE DA+  MG+  VR L
Sbjct: 105 TSLAGAASGLAVIRQGASLVAAVLMASAVGSAITADLGSRTMREETDAMEVMGVSVVRRL 164

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PR  A ++    LT +  F+    + +    + +     F S   S AT  ++   L+
Sbjct: 165 VVPRFAAAVMIGVALTGVVCFAGFFASYMFNVYFQNGAPGSFVSTSASFATTGDMILALL 224

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           KA      + IV+ ++G +       +   V   VV++I +++I++   +  Y  +
Sbjct: 225 KAIVFGAIVAIVSSQKGLSTKGGPTGVANSVNAAVVEAILLLMIVNVAISQLYIML 280


>gi|300865114|ref|ZP_07109939.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300336885|emb|CBN55089.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 290

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 63/252 (25%), Positives = 112/252 (44%), Gaps = 2/252 (0%)

Query: 120 KFINDSCSQAHI--LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +  +++          + +   G+      K K     +I  +  VG+  +  V+LI+  
Sbjct: 32  RAFDETLEDRWFQRFFVTLLLGGQVWLRLLKGKVCRKLVIEHLVTVGLGSLRAVLLIALF 91

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G +   Q A +L +FGA        +I   RE+  +LTA ++AG+ GS   AEIG M++
Sbjct: 92  AGMIFTIQSARELIRFGAVGAVGGAFAIAFCRELAPVLTAGVVAGQVGSGFAAEIGEMQV 151

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++DA+  +  + V  L+ PR+ A  I LP+LTI +    I G +     +Y +P  +F
Sbjct: 152 TEQVDALYMLKTNPVDYLVLPRVVACCIMLPILTIFSVVVGIGGGAFAAAIFYHLPPGMF 211

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                +     ++ T ++K       IGI+    G         +G+  T  VV S   +
Sbjct: 212 LESVRTFLEPWDLVTVVVKGVIFGAIIGIIGCGWGLTTTGGGKGVGRSATAAVVTSWVSI 271

Query: 358 IIIDSLFAIFYF 369
            + D   ++  F
Sbjct: 272 FMADFFLSLLMF 283


>gi|118466592|ref|YP_883684.1| hypothetical protein MAV_4553 [Mycobacterium avium 104]
 gi|118167879|gb|ABK68776.1| conserved hypothetical protein [Mycobacterium avium 104]
          Length = 260

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 92/241 (38%), Gaps = 4/241 (1%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +        +          ++++      I Q +++    +   + ++     +I    
Sbjct: 16  AVGGFFRTCVLTGKALFRRPFQWR----ETIEQGWFITSVSLLPTLAVAIPLTVLIIFTL 71

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
              L++FGA   S    ++  + ++G L T ++IAG   +AI A++G+  I EEIDA+  
Sbjct: 72  NILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGSTAICADLGARTIREEIDALEV 131

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +G+D +  L+ PR+ A  I   LL        ++G  +       I    +         
Sbjct: 132 LGIDPIHRLVVPRVVAATIVATLLNGAVITIGLVGGFVFGVFIQHISAGAYVGTLTLITG 191

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L  +   ++K+       G+V    G         +G  V   +V  +  +  ++ +   
Sbjct: 192 LPEVVISVVKSATFGTIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFAVNVVLTT 251

Query: 367 F 367
            
Sbjct: 252 I 252


>gi|120403833|ref|YP_953662.1| hypothetical protein Mvan_2849 [Mycobacterium vanbaalenii PYR-1]
 gi|119956651|gb|ABM13656.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 270

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 104/249 (41%), Gaps = 1/249 (0%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                  +    +G ++S + +     ++        + Q ++V    +   +L++    
Sbjct: 15  ALGAGMAAPMQGVGGLLSMSADAVKFLFRRPFQGREFLEQSWFVARVSLMPTLLVAIPFT 74

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            +++      L + GA   S    +   + ++G ++T +++AG   +A+ A++GS  I E
Sbjct: 75  VLVSFTLNILLRELGAADLSGAGAAFGAVTQVGPMVTVLIVAGAGATAMCADLGSRTIRE 134

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDA+  +G++ V+ L++PR+ A  +   LL  L     I+G          +    F +
Sbjct: 135 EIDALEVLGINPVQRLVTPRMLASGLVALLLNSLVVIIGILGGYFFSIFIQGVNPGAFAA 194

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISIVI 358
                  +  +    +KA       G+VA   G +  G  + ++G  V   VV +   + 
Sbjct: 195 GITLLTGVPEVIISCVKAALFGLIAGLVACYRGLSISGGGAKAVGNAVNETVVYAFMALF 254

Query: 359 IIDSLFAIF 367
           +++ +    
Sbjct: 255 VVNVVVTAI 263


>gi|226365583|ref|YP_002783366.1| YrbE family protein [Rhodococcus opacus B4]
 gi|226244073|dbj|BAH54421.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 286

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 53/256 (20%), Positives = 104/256 (40%), Gaps = 10/256 (3%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVSG------- 167
             +   +         LG   +  G   A        +   ++RQ+  +   G       
Sbjct: 11  HWVRARVRQPLGLMTGLGREFTFYGSVIAGVPLAVVKYWRHIMRQIGDISFGGATLLAGG 70

Query: 168 --VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             + VV  +S V    +  +G   L   G    S  L +IL  RE+  ++ ++ +A + G
Sbjct: 71  GAIGVVFAMSAVAATQVGIEGLRGLDLLGMGSLSGLLSAILNTRELAPVIASIALAAKVG 130

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           +   A++G+M+I+EEI A+  M +  +  L S R+ + +I +  L ++   S+ + + +V
Sbjct: 131 TGFTAQLGAMRISEEISALDAMAIPSLPFLASTRLVSCLICVVPLYVVGLLSSYLASRLV 190

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
           I  +       +   FH   T  ++    +KA   A  I +V    G+        +G+ 
Sbjct: 191 IVTFSGQSAGTYDYYFHLMLTPTDVAYSFVKAVVFATIIALVHCSYGYHAYGGPEGVGRA 250

Query: 346 VTTCVVQSISIVIIID 361
               +  SI  + I+D
Sbjct: 251 AGRALRTSILAIGIVD 266


>gi|15607727|ref|NP_215101.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis H37Rv]
 gi|15839989|ref|NP_335026.1| hypothetical protein MT0616 [Mycobacterium tuberculosis CDC1551]
 gi|31791769|ref|NP_854262.1| integral membrane protein YrbE2a [Mycobacterium bovis AF2122/97]
 gi|121636505|ref|YP_976728.1| integral membrane protein YrbE2a [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148660356|ref|YP_001281879.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis H37Ra]
 gi|148821789|ref|YP_001286543.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis F11]
 gi|167969010|ref|ZP_02551287.1| hypothetical integral membrane protein yrbE2A [Mycobacterium
           tuberculosis H37Ra]
 gi|215402355|ref|ZP_03414536.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           02_1987]
 gi|215410128|ref|ZP_03418936.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           94_M4241A]
 gi|215425819|ref|ZP_03423738.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis T92]
 gi|215444700|ref|ZP_03431452.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis T85]
 gi|218752227|ref|ZP_03531023.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis GM
           1503]
 gi|219556429|ref|ZP_03535505.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis T17]
 gi|224988977|ref|YP_002643664.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253797521|ref|YP_003030522.1| hypothetical protein TBMG_00594 [Mycobacterium tuberculosis KZN
           1435]
 gi|254230927|ref|ZP_04924254.1| hypothetical integral membrane protein yrbE2A [Mycobacterium
           tuberculosis C]
 gi|254363545|ref|ZP_04979591.1| hypothetical integral membrane protein yrbE2A [Mycobacterium
           tuberculosis str. Haarlem]
 gi|254549542|ref|ZP_05139989.1| hypothetical protein Mtube_03615 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260185464|ref|ZP_05762938.1| hypothetical protein MtubCP_05434 [Mycobacterium tuberculosis
           CPHL_A]
 gi|260199592|ref|ZP_05767083.1| hypothetical protein MtubT4_05534 [Mycobacterium tuberculosis T46]
 gi|260203751|ref|ZP_05771242.1| hypothetical protein MtubK8_05499 [Mycobacterium tuberculosis K85]
 gi|289441976|ref|ZP_06431720.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis
           T46]
 gi|289446140|ref|ZP_06435884.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis
           CPHL_A]
 gi|289552840|ref|ZP_06442050.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis KZN
           605]
 gi|289568520|ref|ZP_06448747.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis
           T17]
 gi|289573187|ref|ZP_06453414.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis K85]
 gi|289744301|ref|ZP_06503679.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           02_1987]
 gi|289749084|ref|ZP_06508462.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis
           T92]
 gi|289756666|ref|ZP_06516044.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|289760706|ref|ZP_06520084.1| hypothetical integral membrane protein yrbE2A [Mycobacterium
           tuberculosis GM 1503]
 gi|294996099|ref|ZP_06801790.1| hypothetical protein Mtub2_16765 [Mycobacterium tuberculosis 210]
 gi|297633081|ref|ZP_06950861.1| hypothetical protein MtubK4_03105 [Mycobacterium tuberculosis KZN
           4207]
 gi|297730059|ref|ZP_06959177.1| hypothetical protein MtubKR_03150 [Mycobacterium tuberculosis KZN
           R506]
 gi|298524074|ref|ZP_07011483.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|306774691|ref|ZP_07413028.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu001]
 gi|306781579|ref|ZP_07419916.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu002]
 gi|306783229|ref|ZP_07421551.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu003]
 gi|306787601|ref|ZP_07425923.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu004]
 gi|306794365|ref|ZP_07432667.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu005]
 gi|306796335|ref|ZP_07434637.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu006]
 gi|306802195|ref|ZP_07438863.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu008]
 gi|306806402|ref|ZP_07443070.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu007]
 gi|306966602|ref|ZP_07479263.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu009]
 gi|306970795|ref|ZP_07483456.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu010]
 gi|307078518|ref|ZP_07487688.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu011]
 gi|307083082|ref|ZP_07492195.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu012]
 gi|313657386|ref|ZP_07814266.1| hypothetical protein MtubKV_03140 [Mycobacterium tuberculosis KZN
           V2475]
 gi|2222771|emb|CAB09951.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE2A
           [Mycobacterium tuberculosis H37Rv]
 gi|13880131|gb|AAK44840.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|31617356|emb|CAD93464.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE2A
           [Mycobacterium bovis AF2122/97]
 gi|121492152|emb|CAL70617.1| Conserved hypothetical integral membrane protein yrbE2A
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124599986|gb|EAY58996.1| hypothetical integral membrane protein yrbE2A [Mycobacterium
           tuberculosis C]
 gi|134149059|gb|EBA41104.1| hypothetical integral membrane protein yrbE2A [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148504508|gb|ABQ72317.1| conserved hypothetical integral membrane protein YrbE2a
           [Mycobacterium tuberculosis H37Ra]
 gi|148720316|gb|ABR04941.1| hypothetical integral membrane protein yrbE2A [Mycobacterium
           tuberculosis F11]
 gi|224772090|dbj|BAH24896.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253319024|gb|ACT23627.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis
           KZN 1435]
 gi|289414895|gb|EFD12135.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis
           T46]
 gi|289419098|gb|EFD16299.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis
           CPHL_A]
 gi|289437472|gb|EFD19965.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis KZN
           605]
 gi|289537618|gb|EFD42196.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis K85]
 gi|289542274|gb|EFD45922.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis
           T17]
 gi|289684829|gb|EFD52317.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           02_1987]
 gi|289689671|gb|EFD57100.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis
           T92]
 gi|289708212|gb|EFD72228.1| hypothetical integral membrane protein yrbE2A [Mycobacterium
           tuberculosis GM 1503]
 gi|289712230|gb|EFD76242.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|298493868|gb|EFI29162.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|308216590|gb|EFO75989.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu001]
 gi|308325673|gb|EFP14524.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu002]
 gi|308331897|gb|EFP20748.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu003]
 gi|308335684|gb|EFP24535.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu004]
 gi|308337263|gb|EFP26114.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu005]
 gi|308343188|gb|EFP32039.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu006]
 gi|308347055|gb|EFP35906.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu007]
 gi|308350998|gb|EFP39849.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu008]
 gi|308355632|gb|EFP44483.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu009]
 gi|308359587|gb|EFP48438.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu010]
 gi|308363515|gb|EFP52366.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu011]
 gi|308367196|gb|EFP56047.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu012]
 gi|323720939|gb|EGB30004.1| hypothetical protein TMMG_03290 [Mycobacterium tuberculosis
           CDC1551A]
 gi|326902419|gb|EGE49352.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis
           W-148]
 gi|328457304|gb|AEB02727.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis KZN
           4207]
          Length = 265

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 90/241 (37%), Gaps = 4/241 (1%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +        +          + ++      I Q +++    +   + +S     +I    
Sbjct: 21  AIGGFYRTCVLTGKALVRRPFHWR----EAIEQGWFITSVSLLPTLAVSIPLTVLIIFTL 76

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
              L++FGA   S    ++  + ++G L T ++IAG   +AI A++G+  I EEIDA+  
Sbjct: 77  NILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREEIDAMEV 136

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +G+D +  L+ PR+ A  I   LL        ++G  +       +    +         
Sbjct: 137 LGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGTLTLVTG 196

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L  +   ++K+       G+V    G         +G  V   +V  +  +   + +   
Sbjct: 197 LPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFATNVVLTT 256

Query: 367 F 367
            
Sbjct: 257 I 257


>gi|120405558|ref|YP_955387.1| hypothetical protein Mvan_4606 [Mycobacterium vanbaalenii PYR-1]
 gi|119958376|gb|ABM15381.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 255

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 105/236 (44%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
            G   S   +   + ++        I Q ++V    +   +L++     ++       L+
Sbjct: 14  FGGFYSMALDTFVAMFQPPFAWREFISQAWFVARVSILPTLLLTIPYTVLLTFIETILLT 73

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + GA  FS    ++  +R+IG ++T +++AG   +A+ A++G+  I EE+DA+R MG++ 
Sbjct: 74  EIGASDFSGTGAALGTVRQIGPIVTVLVVAGAGATAMCADLGARTIREELDALRVMGINP 133

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           ++ L+ PR+ A ++    L+       + GA   +    D+    F +         ++ 
Sbjct: 134 IQALVVPRVLAAMVVSLALSATVILVGLSGAYFFVVYIQDVSPGAFAAGLTLIIGATDVV 193

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             L+KA     + G++A  +G +V      +G  V   VV +   +  I+ +    
Sbjct: 194 IALVKAALFGLSAGLIACYKGISVRGGPAGVGNAVNETVVFTFMALFAINIVATAV 249


>gi|262201470|ref|YP_003272678.1| hypothetical protein Gbro_1508 [Gordonia bronchialis DSM 43247]
 gi|262084817|gb|ACY20785.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247]
          Length = 286

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 106/274 (38%), Gaps = 10/274 (3%)

Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFC-ASSYKFKGFLLSLIRQMYYV--- 163
            +    + ++              +G  ++       A  +    +   ++ Q+  V   
Sbjct: 4   ADFSVRVQRRYSARAQQLTGGIVRIGEFVTFIARAIIAIPFTVVHYRKHVLNQIAEVTFG 63

Query: 164 ------GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
                 G   + +V+ +S     ++  +    L   G    S  L +I   RE+  ++  
Sbjct: 64  SKSLLSGGGTLGIVLAMSLAAAMMLGVETYRGLQLVGMTSLSGMLSAIANSRELAPVVVG 123

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           + +A + G+   A++G+M+I++EI A+ +M +  +  L + R+ A ++ +  + ++   +
Sbjct: 124 IALAAKVGTGFTAQVGAMRISDEIAALDSMAIRSIPFLATTRMIAAMVCILPIYMVGLLA 183

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           + I   +V+  Y       +   FH   T  ++     KA   A  + +V    G+    
Sbjct: 184 SYIATRLVVVWYNGESSGTYDYFFHLALTPTDLLYSATKAIVFAAIVALVHCSYGYFASG 243

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
               +G+     +  SI  + I D +F    + +
Sbjct: 244 GPEGVGQAAGRALRTSILAIGIFDVIFTFGLWGL 277


>gi|227536152|ref|ZP_03966201.1| ABC superfamily ATP binding cassette transporter permease protein
           [Sphingobacterium spiritivorum ATCC 33300]
 gi|300772122|ref|ZP_07081992.1| ABC superfamily ATP binding cassette transporter permease protein
           [Sphingobacterium spiritivorum ATCC 33861]
 gi|227244049|gb|EEI94064.1| ABC superfamily ATP binding cassette transporter permease protein
           [Sphingobacterium spiritivorum ATCC 33300]
 gi|300760425|gb|EFK57251.1| ABC superfamily ATP binding cassette transporter permease protein
           [Sphingobacterium spiritivorum ATCC 33861]
          Length = 244

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 62/239 (25%), Positives = 108/239 (45%), Gaps = 1/239 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL- 190
           +G  I           K K +    +  M  +G+  + ++++IS   GAV+  Q AFQL 
Sbjct: 6   IGKYILLLKSVFKKPEKGKIYWKETMFAMTDIGLGSLGLIVIISTFIGAVMTMQIAFQLV 65

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
           S          +     + E+G  ++A+++ G+ GS+I ++IGSM++ E+IDA+  MG++
Sbjct: 66  SDLIPNSIIGQINRDSNILELGPTISALVLMGKVGSSISSQIGSMRVTEQIDALEIMGIN 125

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
               LI P+I A I  +P L I+A F AI+G  +       +  A +      +     +
Sbjct: 126 APGYLILPKILAGITMIPALVIVAIFCAILGGLLGGALSGAVSTADYIQGIQGSFNGFTV 185

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              ++KA      I  V   +GF V   +  +G+  T  VV     ++  D L      
Sbjct: 186 SVAMVKAVVFGFIITSVPAYKGFYVSGGALEVGEAGTQAVVIGCITILASDYLITALML 244


>gi|319948072|ref|ZP_08022243.1| hypothetical protein ES5_02019 [Dietzia cinnamea P4]
 gi|319438260|gb|EFV93209.1| hypothetical protein ES5_02019 [Dietzia cinnamea P4]
          Length = 254

 Score =  163 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 98/236 (41%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G   + T +   S           I Q +++        +L++     +++      L 
Sbjct: 12  IGEFFAMTLDTFVSFPSIVRQGREFIEQSWFIARVSTMATVLVAIPFTVLVSFTLNILLR 71

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + GA   S    ++  + ++G ++T +++AG   +AI A++G+  I EEIDA+  +G+D 
Sbjct: 72  EIGAADLSGAGAALGAVTQVGPMVTVLIVAGAGATAICADLGARTIREEIDAMEVLGIDP 131

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V+ L+ PR+ A      LL  L     I+G  +       +    F +       L  + 
Sbjct: 132 VKRLVVPRVAASTFVALLLNGLVCTIGILGGFLFSVLLQGVNPGAFVNGITLLTGLGELI 191

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
              IKA       G+VA  +G  V      +G  V   VV +   + +++++    
Sbjct: 192 LAQIKAGVFGMLAGLVACYKGLYVRGGPKEVGSAVNETVVFAFMCLFVVNTVITAV 247


>gi|296165200|ref|ZP_06847747.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295899389|gb|EFG78848.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 287

 Score =  163 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 104/253 (41%), Gaps = 6/253 (2%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVILISFVT 178
                H+L   +        +  +++G  L L+  + +      VG     V +++    
Sbjct: 27  IIRLGHLLVFFVRALAAVPLALRQYRGEFLRLLSNITWGNGSIVVGGGTAGVAVVLGVTV 86

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA++  +G   L+  G    +  + S++  RE+  L+ ++  A + G    A++GSM+I 
Sbjct: 87  GALVGIEGYNFLNLLGLGPATGFVSSLVNTRELAPLMASLAFAMQGGCRFTAQLGSMRIA 146

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+ ++ +  +  L++ R+ A ++++  L         +   +V+          + 
Sbjct: 147 EEIDAMESIAIRPIPYLVTTRLIASVVAIVPLYAACLAIGYLSTQLVVGIGSGGSTGSYL 206

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
             F       +I   LIKA         +    G+        +G      +  SI++VI
Sbjct: 207 HYFTLMLAGQDIVYSLIKAVIFVWIASTIQCYYGYYASGGPEGVGVAAGHGMRASITVVI 266

Query: 359 IIDSLFAIFYFAI 371
           I++ L  +  + +
Sbjct: 267 IVNMLLTMALWGV 279


>gi|215429420|ref|ZP_03427339.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           EAS054]
 gi|289752626|ref|ZP_06512004.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
 gi|289693213|gb|EFD60642.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
          Length = 265

 Score =  163 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 90/241 (37%), Gaps = 4/241 (1%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +        +          + ++      I Q +++    +   + +S     +I    
Sbjct: 21  AIGGFYRTCVLTGKALVRRPFHWR----EAIEQGWFITSVSLLPTLAVSIPLTVLIIFTL 76

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
              L++FGA   S    ++  + ++G L T ++IAG   +AI A++G+  I EEIDA+  
Sbjct: 77  NILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREEIDAMEV 136

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +G+D +  L+ PR+ A  I   LL        ++G  +       +    +         
Sbjct: 137 LGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGTLTLVTG 196

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L  +   ++K+       G+V    G         +G  V   +V  +  +   + +   
Sbjct: 197 LPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFATNVVLTT 256

Query: 367 F 367
            
Sbjct: 257 I 257


>gi|118619035|ref|YP_907367.1| YrbE family protein, YrbE5A [Mycobacterium ulcerans Agy99]
 gi|118571145|gb|ABL05896.1| YrbE family protein, YrbE5A [Mycobacterium ulcerans Agy99]
          Length = 289

 Score =  163 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 63/276 (22%), Positives = 116/276 (42%), Gaps = 5/276 (1%)

Query: 97  KPQRSFFYNSFKNLHYHIGKKIVKFIN-DSCSQAHILG----LVISNTGEFCASSYKFKG 151
           +P+ +   +   +    IG     +I     +    +G    L +     F       + 
Sbjct: 4   QPEPALLGSRNDDGVAAIGDWAAGYIRRHPLAALTTVGEQFVLGVRTIQYFFVDLVTGRF 63

Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211
                +RQ  ++  + V   IL+S      ++ Q A    Q GA   +     +  +R+ 
Sbjct: 64  QWQEFVRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGATSLAGAASGLAVIRQG 123

Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271
             L+ AV++A   GSAI A++GS  + EE DA+  MGL  +R L+ PR  A I+    LT
Sbjct: 124 ASLVAAVLMASAVGSAITADLGSRTMREETDAMEVMGLSVIRRLVVPRFAAAIMIGVALT 183

Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
            +  F     + +    + +     F + F S AT  ++F  L KA      + +V+ ++
Sbjct: 184 GVVCFVGFFASYMFNVYFQNGAPGSFVATFASFATTDDMFLALFKAVMFGAIVAVVSAQK 243

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           G +       +   V   VV+SI +++I++   +  
Sbjct: 244 GLSTKGGPTGVANSVNAAVVESILVLMIVNVSISQL 279


>gi|125591222|gb|EAZ31572.1| hypothetical protein OsJ_15716 [Oryza sativa Japonica Group]
          Length = 322

 Score =  163 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 91/236 (38%), Gaps = 23/236 (9%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
            +   G+        +    +L+ Q+  VG     V +L +   G     Q   + ++ G
Sbjct: 99  ALLLAGQVFHRVLTGRVHRRNLLAQLRRVGPGSARVSLLTAAFVGMAFTIQFVREFTRLG 158

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
                  ++++   RE+  +                       +E+ D +R +G   V  
Sbjct: 159 LHRSVDSVLALALSRELSPV-----------------------SEQTDTLRVLGAQPVDY 195

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L+ PR+ A +++LP+LT+++    +  ++ +    + +  ++            ++ + L
Sbjct: 196 LVVPRVVACVLALPVLTLMSFALGLASSAFLADSIFGVSTSIILESARRALRPWDLISSL 255

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +K+      I +V+   G      +  +G+  T+ VV S+  + + D   +  +F 
Sbjct: 256 LKSQVFGAIIAVVSCAWGVTTHGGAKGVGESTTSAVVVSLVGIFVADFALSCLFFQ 311


>gi|328951866|ref|YP_004369200.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM
           11109]
 gi|328452190|gb|AEB08019.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM
           11109]
          Length = 274

 Score =  163 bits (413), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 68/242 (28%), Positives = 120/242 (49%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           S A+I GL             +++       RQ+Y +G  G P+V L   + G  I    
Sbjct: 31  SLANIFGLFYRLLTLGLVGMTRYRLIRREFARQIYLIGGRGWPIVALTGMLLGLAIIVYA 90

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           + QL++ G E F  +L+ I+ +RE+G +LTA+++  RSG+A++ EIG M +  EI+A+  
Sbjct: 91  SAQLAKIGGEQFVGNLLVIIVIRELGPVLTALLVLLRSGAAMIVEIGGMVLEREIEALEL 150

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MGL+   ++  PR W L+ISL  L  +    A+ G  +    + D+ + VF+  F +   
Sbjct: 151 MGLEPEIVIGGPRFWGLVISLITLYFIFVVCAVWGGFLFSQIFADMYWGVFWLSFVNALG 210

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
             ++     K       IG+VA+  G     H  S+  + +   V S+  + +I++  ++
Sbjct: 211 WPDLVLNFAKVVLFGMFIGVVAIYHGLQTADHWESIVAQTSRGAVISLLFLGLINTALSV 270

Query: 367 FY 368
            Y
Sbjct: 271 LY 272


>gi|296165083|ref|ZP_06847636.1| integral membrane protein YRBE1A [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295899576|gb|EFG79029.1| integral membrane protein YRBE1A [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 264

 Score =  163 bits (413), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 52/251 (20%), Positives = 103/251 (41%), Gaps = 4/251 (1%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           K+   +      A     +   TG+     ++++ F+ +     +++    +   I +S 
Sbjct: 10  KVGSRLRPGTEVAGGFFRMCVLTGKALKQPFEWREFIWN----GWFLMRVSLLPTIAVSI 65

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
               ++       L++ GA   S    +I  + ++G ++T +++AG  G+AI A++G+  
Sbjct: 66  PETVLLIFTLNLLLAEIGAADVSGAGAAIGAVTQLGPIVTVLVVAGAGGTAICADLGART 125

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           I EEIDA+  +G+D +  L+ PR+ A  +   LL  L     + G  +      ++    
Sbjct: 126 IREEIDALEVLGIDPIHRLVVPRVVASTMVAVLLNGLVVAVGLGGGYLFSVYLQNVSSGA 185

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           + S   +   L  +    IKA       G+V    G  V   S  LG  V   VV     
Sbjct: 186 YLSTLTALTGLPEVVIAFIKAATFGLIAGLVGCYRGLIVRGGSKGLGTAVNETVVLCFIA 245

Query: 357 VIIIDSLFAIF 367
           +  +++     
Sbjct: 246 LFAVNAALTTI 256


>gi|126433443|ref|YP_001069134.1| hypothetical protein Mjls_0834 [Mycobacterium sp. JLS]
 gi|126233243|gb|ABN96643.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 281

 Score =  163 bits (413), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 52/266 (19%), Positives = 111/266 (41%), Gaps = 10/266 (3%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVS-------- 166
           +     +         +GL +    +  +S       +    ++QM  +           
Sbjct: 8   RLFEATVGMVGGVFREVGLWVVFIAKAFSSVPVAVFKYRRQTLQQMNSLAWGRGSLIVDG 67

Query: 167 -GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             + V++L+    GA +A +    L+  G    S  +  I  +RE+G +++AV  AG++G
Sbjct: 68  GAISVLLLLGIAVGASLAVEAFAVLNIIGFGGLSGIIGGIGGVRELGPIVSAVAFAGQAG 127

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
             + AEIG+M+I EEIDA+  +GL  +  ++  R+   +I +    ++A  +       V
Sbjct: 128 CRMTAEIGAMRIAEEIDALEAIGLRPIPFVVGTRLIGAMILVVPGYLVALIANFFVMDTV 187

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
           I  +++ P   +   F    T  ++   +IK      A+ ++    G+        +G+ 
Sbjct: 188 IRVFHNQPGGTYNHYFAQFVTPTDLAYSVIKVAVFCMAVTLIHCYYGYFASGGPVGVGRA 247

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAI 371
               V  S+  +I +D +  +  + +
Sbjct: 248 SGRAVRTSLITIIFLDLILTVAMWGL 273


>gi|108797253|ref|YP_637450.1| hypothetical protein Mmcs_0273 [Mycobacterium sp. MCS]
 gi|119866338|ref|YP_936290.1| hypothetical protein Mkms_0283 [Mycobacterium sp. KMS]
 gi|126432877|ref|YP_001068568.1| hypothetical protein Mjls_0264 [Mycobacterium sp. JLS]
 gi|108767672|gb|ABG06394.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
 gi|119692427|gb|ABL89500.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
 gi|126232677|gb|ABN96077.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 256

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 48/244 (19%), Positives = 103/244 (42%), Gaps = 5/244 (2%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +   + G+ +          ++ + FL     Q ++V    +   +L++     +++ 
Sbjct: 10  LGAVGGLFGMALDAVRFTFRRPFQAREFL----EQSWFVARVSLAPTLLVAIPFTVLVSF 65

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                L + GA   S    +   + ++G L+T +++AG   +A+ A++GS  I EEI+A+
Sbjct: 66  TLNILLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEIEAM 125

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             +G++ V  L++PR+ A  +   LL  L     I+G         D+    F +     
Sbjct: 126 EVLGINPVARLVTPRMLASGLVALLLNSLVVIIGIVGGYAFSVFVQDVNPGAFAAGITLL 185

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAV-GVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             +  +    +KA       G+VA   G ++    + ++G  V   VV +   + +I+ +
Sbjct: 186 TGIGEVIISCVKAALFGLIAGLVACYRGLSINRGGAKAVGNAVNETVVYAFMALFVINVV 245

Query: 364 FAIF 367
               
Sbjct: 246 VTAI 249


>gi|120405557|ref|YP_955386.1| hypothetical protein Mvan_4605 [Mycobacterium vanbaalenii PYR-1]
 gi|119958375|gb|ABM15380.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 284

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 54/246 (21%), Positives = 100/246 (40%), Gaps = 9/246 (3%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVPV 170
           ++    N   +Q    G  + + G        +   L+ +I QM        V    V +
Sbjct: 19  RVADPWNHIGTQTKFYGRTLRSVGYVFTH---YGVELIRIIAQMGLGAGALIVIGGTVAI 75

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           V  ++  TGA++A QG    S+ G E  +  + +   +R I    TA+ ++   G+   A
Sbjct: 76  VGFLTVTTGALVAVQGYSDFSELGVEALTGFVSAYFNVRLIAPATTAIALSATIGAGATA 135

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           ++G+M+INEEIDA+  MG+  +  L S R+ A  + +  L  +    A   A       Y
Sbjct: 136 QLGAMRINEEIDALEVMGIRSIAFLASSRVIAGFLVVIPLYCVGVLMAFWAARFGTTVIY 195

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
                V+   F +     ++     +   ++  I +V    G+        +G+ V   V
Sbjct: 196 GQSTGVYDHYFKTFLNPTDLMWSFGQCIALSVIIMLVHTYYGYTARGGPAGVGEAVGRAV 255

Query: 351 VQSISI 356
             S+ +
Sbjct: 256 RTSLIV 261


>gi|326336634|ref|ZP_08202802.1| ABC superfamily ATP binding cassette transporter permease protein
           [Capnocytophaga sp. oral taxon 338 str. F0234]
 gi|325691104|gb|EGD33075.1| ABC superfamily ATP binding cassette transporter permease protein
           [Capnocytophaga sp. oral taxon 338 str. F0234]
          Length = 273

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 52/229 (22%), Positives = 93/229 (40%), Gaps = 2/229 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G       E      K+      +++++  +  S + ++  IS   GAVIA Q A 
Sbjct: 32  LEAIGRYFLMIYEIFRKRTKWSIMKKLIMKEIDDLMYSSLGIIAFISLFVGAVIAIQMAL 91

Query: 189 QLSQFGAE-IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +                  + E     T++++AG+ GS I + IG+M++ E+IDA+  M
Sbjct: 92  NIDNPLIPKSLIGFATRQTIVLEFAPTFTSIIVAGKVGSFITSSIGTMRVTEQIDALDIM 151

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++ +  LI P+I AL++  P    +A    I G  I     +    A F          
Sbjct: 152 GVNSLNYLIFPKIIALLL-YPFAITMAMALGIYGGYIAATVGHYATSAEFLEGLKLQFRS 210

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
            +I   LIK+   A  +  +    G+ +   +  +GK  T   V +   
Sbjct: 211 FDITYALIKSVIFAFVLATIPAYHGYYMKGGALDVGKASTVSFVWTSVA 259


>gi|296394453|ref|YP_003659337.1| hypothetical protein Srot_2050 [Segniliparus rotundus DSM 44985]
 gi|296181600|gb|ADG98506.1| protein of unknown function DUF140 [Segniliparus rotundus DSM
           44985]
          Length = 290

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 57/273 (20%), Positives = 105/273 (38%), Gaps = 3/273 (1%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLI-- 157
                 F      I    + F          LGLV+        S   + +  L+ L   
Sbjct: 9   PPLVAPFVRGVKAIFNGPLNFFEQMGHVLTFLGLVLGAIPHTFRSYGRQIRDTLIDLTWG 68

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
                VG   + V+ ++    G VI  +G   LS      F+  + +    RE G L  A
Sbjct: 69  NGRIIVGGGTLSVLAVLGLSIGGVIGLEGYNALSIINIAPFTSFVSAYGMTREFGPLAAA 128

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +  A ++G  I AEIG+M+I EEIDA+   G+  +  +++ R+ A +  +  + +L    
Sbjct: 129 LGFAAQAGCRITAEIGAMRIAEEIDALEATGIRSIPFVVTTRVIAGVAVILPVYLLTLIL 188

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
                S+V+   +      +   F       ++   LIK      A+ ++   +G+    
Sbjct: 189 GYEACSLVVNVLHSQSSGTYDYNFSHFLVPRDVVLSLIKTAVFIVAVVMIHGYQGYYASG 248

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               +G      +  SI IV +++    +F++ 
Sbjct: 249 GPEGVGLASGRAIRSSIVIVTVLNMFLTLFFWG 281


>gi|171463508|ref|YP_001797621.1| protein of unknown function DUF140 [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171193046|gb|ACB44007.1| protein of unknown function DUF140 [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 216

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 68/209 (32%), Positives = 114/209 (54%), Gaps = 5/209 (2%)

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G SG+    L S + G +++ Q A  + QFGA  F   L ++  +RE+G ++TA+++AGR
Sbjct: 12  GHSGIADRWLGSLLIGVILSFQAAIGMQQFGAVSFVGPLAALDIVREMGPIITAILLAGR 71

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           S +A   EIG+M +N E+DA+ + G      L+  RI A I+  P+LT+ A+  +I  + 
Sbjct: 72  SSAAFAVEIGTMTVNSEVDALVSGG----YFLVVSRILAGILVAPILTLFADIVSIFSSM 127

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           + +   Y IPF  F++   S   + +I +GL+KA      I  +    G   G  + ++G
Sbjct: 128 LTM-LIYGIPFVNFYNGMLSAVDVEDILSGLLKATLFGVVISAMGCLRGMQTGTGAAAVG 186

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
              T  VV SI +++I+D +FA   +  G
Sbjct: 187 ISATRAVVSSIVMIVIVDGIFAFISYKTG 215


>gi|145222687|ref|YP_001133365.1| hypothetical protein Mflv_2099 [Mycobacterium gilvum PYR-GCK]
 gi|315443151|ref|YP_004076030.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|145215173|gb|ABP44577.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
 gi|315261454|gb|ADT98195.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 255

 Score =  163 bits (412), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 48/243 (19%), Positives = 106/243 (43%), Gaps = 4/243 (1%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +      + +          + ++ F    I Q ++V    +   ++++     ++  
Sbjct: 11  MRAFGGFFSMALDTFVAMVKPPFAWREF----ISQSWFVARVSIVPTLMLTIPYTVLLTF 66

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                L++FGA  FS    ++  +R+IG ++T +++AG   +A+ A++G+  I EE+DA+
Sbjct: 67  TFNILLTEFGAADFSGTGAALGTVRQIGPIVTVLVVAGAGATAMCADLGARTIREELDAL 126

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R MG++ ++ L+ PR+ A  +    L+       + GA        ++    F +     
Sbjct: 127 RVMGVNPIQALVVPRVLAATLVSLALSATVILVGLAGAYFFCVYIQNVSPGAFAAGLTLI 186

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               ++   L+KA     + G++A  +G +VG     +G  V   VV +   +  I+ + 
Sbjct: 187 IGATDVIIALVKAALFGLSAGMIACYKGISVGGGPAGVGNAVNETVVFTFMALFAINIVA 246

Query: 365 AIF 367
              
Sbjct: 247 TAV 249


>gi|126436262|ref|YP_001071953.1| hypothetical protein Mjls_3685 [Mycobacterium sp. JLS]
 gi|126236062|gb|ABN99462.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 285

 Score =  163 bits (412), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 113/260 (43%), Gaps = 6/260 (2%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVS 166
            + + + + ++        +   I   G    ++  F+  ++ LI ++        +   
Sbjct: 13  RLARGVRRPVDVLGRLGDHMLFYIRAIGGVPHATVHFRKEIIRLIAEISMGAGTLAMIGG 72

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + +V  ++   G  +A QG   L   G E  +  L + + +R     +  + +A   G+
Sbjct: 73  TLVIVGFLTLAAGGTLAVQGFSSLGDIGIEALTGFLAAFINVRIAAPTVAGIGLAATFGA 132

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
            + A++G+M+INEEIDA+ +M +  V  L+S RI A +I++  L  +A   + + +  V 
Sbjct: 133 GVTAQLGAMRINEEIDALESMAIRPVEYLVSTRIAAGMIAITPLYAIAVILSFLASQFVT 192

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
              +     ++   F +     ++    ++A  MA  I +V    G+      + +G  V
Sbjct: 193 VMLFGQSGGLYDHYFDTFLNPIDLLWSFLQAVLMAITILLVHTYFGYFASGGPSGVGVAV 252

Query: 347 TTCVVQSISIVIIIDSLFAI 366
              V  S+ +V+ +  L ++
Sbjct: 253 GNAVRTSLILVVSVTLLVSL 272


>gi|145225118|ref|YP_001135796.1| hypothetical protein Mflv_4540 [Mycobacterium gilvum PYR-GCK]
 gi|145217604|gb|ABP47008.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
          Length = 270

 Score =  162 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 105/237 (44%), Gaps = 1/237 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G ++S + +     ++        + Q ++V    +   +L++     +++      LS
Sbjct: 27  IGGLLSMSADAVKFLFRRPFQTSEFLLQSWFVARVSLAPTLLVAIPFTVLVSFTLNILLS 86

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + GA   S    +   + ++G ++T +++AG   +A+ A++GS  I EEIDA+  +G++ 
Sbjct: 87  ELGAADLSGAGAAFGAVTQVGPMVTVLIVAGAGATAMCADLGSRTIREEIDALEVLGINP 146

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V+ L++PR+ A  +   LL  L     I+G  +       +    F +       +  + 
Sbjct: 147 VQRLVTPRMLASGLVALLLNSLVVIIGIVGGYVFSIFVQGVNPGAFAAGITLLTGVPEVI 206

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVG-VHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
              +KA       G+VA   G ++    + ++G  V   VV +   + +++ +    
Sbjct: 207 ISCVKAALFGLIAGLVACYRGLSISTGGAKAVGNAVNETVVYAFMALFVVNVVVTAI 263


>gi|145225117|ref|YP_001135795.1| hypothetical protein Mflv_4539 [Mycobacterium gilvum PYR-GCK]
 gi|315445484|ref|YP_004078363.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|145217603|gb|ABP47007.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
 gi|315263787|gb|ADU00529.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 282

 Score =  162 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 54/268 (20%), Positives = 116/268 (43%), Gaps = 10/268 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------ 162
            L   +G+ +   +          G  ++           ++  ++ L+ ++        
Sbjct: 10  QLVRRLGRPV-DTLGGIGEHTAFYGRALAGVPHAVVH---YRREIIRLVAEISMGAGTLA 65

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           +    V +V  ++   G  +A QG   L   G E  +  L + + +R    ++  + +A 
Sbjct: 66  MIGGTVVIVGFLTLAAGGTLAVQGYSSLGDIGIEALTGFLAAFINVRISAPVVAGIGLAA 125

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
             G+ + A++G+M+INEEIDA+ TMG+  V  L+S RI A +I++  L  +A   + + +
Sbjct: 126 TFGAGVTAQLGAMRINEEIDALETMGIRPVEYLVSTRIVAGMIAIAPLYSIAVILSFLAS 185

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
            +     +     ++   F +     ++    ++A  MA A+ +V    G+  G   + +
Sbjct: 186 KLTTVVLFGQSAGLYNHYFTTFLNPRDLLWSFLQAILMAMAVLLVHTYFGYFAGGGPSGV 245

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G  V   V  S+ +VI +  L ++  + 
Sbjct: 246 GVAVGNAVRTSLIVVISVTLLVSLAVYG 273


>gi|226364102|ref|YP_002781884.1| YrbE family protein [Rhodococcus opacus B4]
 gi|226242591|dbj|BAH52939.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 289

 Score =  162 bits (411), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 103/248 (41%), Gaps = 10/248 (4%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---------VPVVILIS 175
                 +   +   T    A    F+ +    IR +  V +           + V+ L++
Sbjct: 26  IGHMEEMGRQLHFYTHAVTAIPRTFRRYRKETIRLLAEVSMGTGALAVIGGTLVVISLLT 85

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G  + QQGA  + + G    S  + +    RE   ++  + +    G+   A++G+M
Sbjct: 86  TAVGYEVGQQGATSMGRIGIGALSGFISAFFNTREAIPVIAGIALTATVGAGFTAQLGAM 145

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           +++EEIDA+ TM +  +  L++ R+ A II++  L  +A F   +   +V  +Y      
Sbjct: 146 RVSEEIDAMETMSIPSLPYLVTTRVTAGIIAVIPLYAVALFVGYVATQLV-TEYLGEASG 204

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            +   F+     +++   ++K   M+  +  V    G+        +G  V   V  S+ 
Sbjct: 205 TYQHYFNVFLVPSDVAWSMVKVLAMSVVVMCVHCYHGYNAKGGPAGVGVAVGRAVRTSLI 264

Query: 356 IVIIIDSL 363
            +++ID L
Sbjct: 265 AIMVIDLL 272


>gi|315445485|ref|YP_004078364.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|315263788|gb|ADU00530.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 270

 Score =  162 bits (411), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 105/237 (44%), Gaps = 1/237 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G ++S + +     ++        + Q ++V    +   +L++     +++      LS
Sbjct: 27  IGGLLSMSADAVKFLFRRPFQTSEFLLQSWFVARVSLAPTLLVAIPFTVLVSFTLNILLS 86

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + GA   S    +   + ++G ++T +++AG   +A+ A++GS  I EEIDA+  +G++ 
Sbjct: 87  ELGAADLSGAGAAFGAVTQVGPMVTVLIVAGAGATAMCADLGSRTIREEIDALEVLGINP 146

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V+ L++PR+ A  +   LL  L     I+G  +       +    F +       +  + 
Sbjct: 147 VQRLVTPRMLASGLVALLLNSLVVIIGIVGGYVFSIFVQGVNPGAFAAGITLLTGVPEVI 206

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVG-VHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
              +KA       G+VA   G ++    + ++G  V   VV +   + +++ +    
Sbjct: 207 ISCVKAALFGLIAGLVACYRGLSISTGGAKAVGNAVNETVVYAFMALFVVNVVVTAI 263


>gi|218658451|ref|ZP_03514381.1| probable ABC transporter, permease protein [Rhizobium etli IE4771]
          Length = 184

 Score =  162 bits (411), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 89/155 (57%), Positives = 117/155 (75%)

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           ++MIAGRSGSAI AEIGSMK+ EEIDA++ MGL+ + +LI PR+ AL I+LPLLT+LANF
Sbjct: 28  SIMIAGRSGSAITAEIGSMKMREEIDALKVMGLNPIGVLIFPRLVALTIALPLLTVLANF 87

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           +++ GA+ V W Y  I FA F +R H   TL+ + +G+IKAPFMA  IGIVA  EG  VG
Sbjct: 88  ASLAGAAAVAWGYSGITFANFLARLHEAVTLSTVLSGMIKAPFMALVIGIVAAVEGLKVG 147

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
             + SLG+ VT  VV++I +VI++D LFA+FY AI
Sbjct: 148 GSAESLGQHVTASVVKAIFVVILMDGLFAMFYAAI 182


>gi|254820120|ref|ZP_05225121.1| hypothetical protein MintA_09346 [Mycobacterium intracellulare ATCC
           13950]
          Length = 286

 Score =  162 bits (411), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 55/261 (21%), Positives = 108/261 (41%), Gaps = 14/261 (5%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVI 172
           V       +QA      +    +  +S   +K   L +I +M        V    V +V 
Sbjct: 22  VAGWRRIGAQARFYARTLGAIRDALSS---YKHETLRMIAEMGLGAGALAVIGGTVGIVG 78

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
            ++   G+++  QG   LS  G E  +  + + +  R +  L   + ++   G+   A++
Sbjct: 79  FLTLSGGSLVTIQGYSSLSGIGVEALTGFVSAYVNGRIVTPLTAVIGLSATIGAGTTAQL 138

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           G+M+INEEIDA+  MG+  +  L+S R+ A ++ +  L  +  + +   A       Y  
Sbjct: 139 GAMRINEEIDALEVMGIRSIAYLVSTRVIAGVVVVIPLYCIGLWMSFYAARFATTSVYGQ 198

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
           P  V+   F +     +I   L++A  M   + +V    G+        +G+ V   V  
Sbjct: 199 PTGVYDHYFSTFLQPTDIIWSLLQAVLMGLVVMLVHTYYGYTASGGPAGVGEAVGRAVRS 258

Query: 353 SISIVIIIDSLFAIFYFAIGI 373
           S+       ++  I + ++ I
Sbjct: 259 SMV-----SAVLVILFSSLAI 274


>gi|326382582|ref|ZP_08204273.1| hypothetical protein SCNU_06570 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326198701|gb|EGD55884.1| hypothetical protein SCNU_06570 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 282

 Score =  162 bits (411), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 43/272 (15%), Positives = 104/272 (38%), Gaps = 6/272 (2%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY-- 162
                    + K      +   +  H++  ++ + G    +   ++  +  L+  + +  
Sbjct: 2   PPLLKPLEWLKKLWQAPRDGIVAMGHLITFLVKSIGLAPITFTHYRKEVWRLLSDVAWGN 61

Query: 163 ----VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
               VG   V V++++  + GA +  +G   L+  G    +  L +    REI  LL A 
Sbjct: 62  GAIVVGGGTVGVMVILGVMGGATVGIEGYTALNLLGMSPITGGLSAFATTREIAPLLAAT 121

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
               +SG    A++GSM+I+EEIDA+ ++ +  +  L++ R+ A ++S+  L  ++  + 
Sbjct: 122 AFTAQSGCRFTAQLGSMRISEEIDALESIAIRPLPYLVTTRMAAAVLSIIPLYAISLAAN 181

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
            +    +           +   F       ++    +K          +    G+     
Sbjct: 182 YVACQFMFQVQSGQGAGTYLHYFDQFILSRDVVFSFLKVIVFVLLTTFIQCYYGYFASGG 241

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
              +G      +  SI  ++  + +  + ++ 
Sbjct: 242 PEGVGVAAGHAIRLSIITIVFANLILTLVFWG 273


>gi|289642564|ref|ZP_06474707.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
 gi|289507652|gb|EFD28608.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
          Length = 285

 Score =  162 bits (411), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 55/259 (21%), Positives = 111/259 (42%), Gaps = 2/259 (0%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172
            +G           +    LG              K + +   + RQ   + +S   ++ 
Sbjct: 19  RVGGSTSDAYGGGQALVTDLGEAALFAVRAFRDIPKTRRYASEVFRQTGIIILSSSGIIW 78

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
            +  +  A I+ +G + L Q GA  ++    ++     +   +   ++A + G  +VAE+
Sbjct: 79  FMMAMLAAEISLEGHYLLRQLGAGGYTAVFTAVSDYT-VAPEMWGWILAAKVGCGLVAEL 137

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN-FSAIIGASIVIWKYYD 291
           GSM+I+EEIDA+  MGLD +  L+S R+ A+II  P + I       I+   + +  ++ 
Sbjct: 138 GSMRISEEIDALEVMGLDSMSYLVSARLLAVIIVTPFMFIAGTGIMYIVNYVLNVHVFHS 197

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
           +    + S F +  T  ++   L+    M   I ++    G+        +GK     +V
Sbjct: 198 VTQGAYLSVFWTFLTQTDVLLSLVAGGIMGTMIVLIGCFYGYTASGGPVGVGKNTAKSMV 257

Query: 352 QSISIVIIIDSLFAIFYFA 370
            ++ IV ++ ++F   +F 
Sbjct: 258 INLIIVSVVGAIFQQLFFG 276


>gi|118619125|ref|YP_907457.1| integral membrane protein YrbE3A_1 [Mycobacterium ulcerans Agy99]
 gi|118571235|gb|ABL05986.1| conserved hypothetical integral membrane protein YrbE3A_1
           [Mycobacterium ulcerans Agy99]
          Length = 255

 Score =  162 bits (410), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 104/249 (41%), Gaps = 4/249 (1%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           V       +      + +          + ++ +    I Q ++V    +   ++++   
Sbjct: 5   VAVAKPLRAFGGFYSMALDTFVAMVHPPFAWREY----IAQAWFVARVSLLPTLMLTIPY 60

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
             ++       L++ GA  FS    ++  +R+IG ++T +++AG   +A+ A++G+  I 
Sbjct: 61  TVLLTFIENILLTEIGAADFSGTGAALGSVRQIGPIVTVLVVAGAGATAMCADLGARTIR 120

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE+DA+R MG+D ++ L+ PR+ A       L+       + GA         +    F 
Sbjct: 121 EELDALRVMGVDPIQALVVPRVLAATTVSLALSASVILVGLSGAYFFCVFIQHVSPGAFA 180

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +         ++   L+KA     + G++A  +G +VG     +G  V   VV +   + 
Sbjct: 181 AGLTLIIGTTDVVIALVKAALFGLSAGLIACYKGISVGGGPAGVGNAVNETVVFTFMALF 240

Query: 359 IIDSLFAIF 367
            I+ +    
Sbjct: 241 AINIVATAV 249


>gi|296141835|ref|YP_003649078.1| hypothetical protein Tpau_4170 [Tsukamurella paurometabola DSM
           20162]
 gi|296029969|gb|ADG80739.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM
           20162]
          Length = 285

 Score =  162 bits (410), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 54/274 (19%), Positives = 113/274 (41%), Gaps = 3/274 (1%)

Query: 95  NQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLL 154
                 +   +  +    +I +  +  +      A    L  +      + + + +  + 
Sbjct: 6   APTEAPARRPSDLRIFLDNIDRNALGPLRTLGRTAQ---LATTTVMAAISDTIRGRLAVK 62

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
             + Q +++         L++   G ++  Q    + Q GAE        +  +++   L
Sbjct: 63  ETVIQAWFLVSVTAVPAFLMAIPFGVIVTIQVGGVVQQIGAESLLGAASGLAVIQQAAPL 122

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
              +++ G   SAI A++G+  I +E+DA+RTMG+D V  L++PR+ A ++  PLL +  
Sbjct: 123 AAGLLLGGAGASAIAADLGARTIRDEVDALRTMGIDPVHRLVAPRLIAAVVVAPLLNLFI 182

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
               I+ A  V     D+    ++  F + AT+ ++   ++KA      I IV  + G  
Sbjct: 183 VVVGILAAFYVAVLGQDVTPGSYWLSFGAYATVRDLGFSMVKAALFGAIIAIVGCQHGLE 242

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
               +  +   V   VV S   +I+++      Y
Sbjct: 243 AKGGARGVADAVNATVVVSTVAIIVLNFALTQAY 276


>gi|108797254|ref|YP_637451.1| hypothetical protein Mmcs_0274 [Mycobacterium sp. MCS]
 gi|119866339|ref|YP_936291.1| hypothetical protein Mkms_0284 [Mycobacterium sp. KMS]
 gi|126432878|ref|YP_001068569.1| hypothetical protein Mjls_0265 [Mycobacterium sp. JLS]
 gi|108767673|gb|ABG06395.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
 gi|119692428|gb|ABL89501.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
 gi|126232678|gb|ABN96078.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 285

 Score =  162 bits (410), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 111/260 (42%), Gaps = 10/260 (3%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVSG-------- 167
           ++V       S    LG  I   G   A   +    +   ++R +  + +          
Sbjct: 13  RVVSQFRKPASLVGRLGDHILFYGRALAGTPHAAMHYRKEIVRLIAEISMGAGTLAMIGG 72

Query: 168 -VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            V +V  ++   G  +A QG   L   G E  +  L + + +R    ++  + +A   G+
Sbjct: 73  TVVIVGFLTLAAGGTLAVQGYSSLGDIGIEALTGFLAAFINVRISAPVVAGIGLAATFGA 132

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
            + A++G+M+INEE+DA+ TMG+  +  L+S RI A +I++  L  +A   + + + +  
Sbjct: 133 GVTAQLGAMRINEEVDALETMGIRPIEYLVSTRIIAGMIAITPLYSVAVILSFLASQLTT 192

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
              +     ++   F++     ++    ++A  MA  +  +    G+        +G  V
Sbjct: 193 VVLFGQSGGLYDHYFNTFLNPVDLLWSFLQAILMALTVLFIHTYFGYFATGGPAGVGVAV 252

Query: 347 TTCVVQSISIVIIIDSLFAI 366
              V  S+ +V+ +  L ++
Sbjct: 253 GNAVRTSLIVVVAVTLLVSL 272


>gi|226361226|ref|YP_002779004.1| YrbE family protein [Rhodococcus opacus B4]
 gi|226239711|dbj|BAH50059.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 291

 Score =  162 bits (410), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 44/279 (15%), Positives = 107/279 (38%), Gaps = 9/279 (3%)

Query: 99  QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158
           +R             +G+     I +           +        +   ++   ++ + 
Sbjct: 8   RRGSSGGILLQPIRSVGRAATSVIEEIGQVTVF---SVKTVALLPKTLRHYRKQTMTTMN 64

Query: 159 QMYY------VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
            M +      V    V ++  +    GAV+A Q        G    +  + S   +R I 
Sbjct: 65  NMAWGNGSLVVDGGVVSLMFFLGLAVGAVVAIQAFMAFDLLGFGALTGIIGSFGNVRVIA 124

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            ++T +  A ++G  + AEIGSM+I+EEIDA  +MGL  +  ++  R+   ++ +    +
Sbjct: 125 PIITGIGFAAQAGCRMTAEIGSMRISEEIDATESMGLQAIPFVVGTRLIGSMLIVIPGYL 184

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           +A   +     ++I  ++  P   +   F    ++ ++   L+KA      + ++    G
Sbjct: 185 MALVVSFFTGGLIIKTFHRQPSGTYDHYFSQFLSVPDLMASLLKAVVFCAVVTMIHCYYG 244

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           +        +G      +  S+  +++++    +  + +
Sbjct: 245 YFADGGPAGVGAASGRAIRASLVAIVVLNFCMTVAIWGL 283


>gi|226361937|ref|YP_002779715.1| YrbE family protein [Rhodococcus opacus B4]
 gi|226240422|dbj|BAH50770.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 286

 Score =  162 bits (410), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 51/257 (19%), Positives = 110/257 (42%), Gaps = 15/257 (5%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---------VP 169
           V+ +     QA   G  I        + +    +    +R +  +G+           V 
Sbjct: 23  VRILKAIGHQADFFGKTIR------LAPHAISSYKKETVRLIAEIGMGSGAMAIIGGTVV 76

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +V  ++   G ++A QG   L   G E  +    + + +R +  +++ + +A   G+   
Sbjct: 77  IVGFMTLSGGTLLAIQGFSSLGNIGVEALTGFFAAFINVRIVAPVISGIALAATIGAGAT 136

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A++G+M+I+EEIDA+  MG+  +  L+S R+ A +IS+  L  +A   + + +       
Sbjct: 137 AQLGAMRISEEIDALEVMGIRSMSYLVSTRLIAGMISIVPLYSMAVIMSFVASQFTTTYV 196

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
           Y     V+   F +     ++F   ++A  MA  + ++    G+        +G+ V   
Sbjct: 197 YGQSSGVYDHYFTTFLRPTDLFWSFLQAVVMALVVMLIHCYYGYHARGGPAGVGEAVGRA 256

Query: 350 VVQSISIVIIIDSLFAI 366
           V  S+  V+ +  + ++
Sbjct: 257 VRTSLIAVVSVTLIASL 273


>gi|120404938|ref|YP_954767.1| hypothetical protein Mvan_3984 [Mycobacterium vanbaalenii PYR-1]
 gi|119957756|gb|ABM14761.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 257

 Score =  162 bits (410), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 50/243 (20%), Positives = 105/243 (43%), Gaps = 4/243 (1%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +      + +          + F+ +++    Q ++V    V   ++++     ++  
Sbjct: 12  VRALGGFFAMSLDTFILMFQRPFAFREYVI----QTWFVARVSVLPALMLTMPYSVLLVF 67

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                L++FGA  FS    +I  + +IG ++T ++++G   +A+ A++G+  I +E+DA+
Sbjct: 68  TFNILLNEFGASDFSGTGAAIGTVNQIGPIVTVLVVSGAGATAMCADLGARTIRDELDAL 127

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R MG++ V+ L+ PR+ A       L+       + GA +       +    F S     
Sbjct: 128 RVMGINPVQALVVPRVLAATTVALALSASVIIVGLAGAFLFCVYVQHVSAGAFISGLTLL 187

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               ++   LIKA     A G++A  +G  VG     +G  V   VV +  ++  I+ + 
Sbjct: 188 TGAGDVVVSLIKATLFGAAAGLIACYKGVYVGGGPAGVGNAVNETVVFTFMVLFAINVIV 247

Query: 365 AIF 367
              
Sbjct: 248 TAV 250


>gi|296169577|ref|ZP_06851197.1| integral membrane protein YrbE4a [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295895843|gb|EFG75538.1| integral membrane protein YrbE4a [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 249

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 47/240 (19%), Positives = 103/240 (42%), Gaps = 1/240 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G + + + +     ++        + Q ++V    +   +L++     +++     
Sbjct: 1   MEAVGGLFAMSADAIKFVFRRPFQWREFLEQSWFVARVAIAPTLLVAIPFTVLVSFTLNI 60

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L + GA   S    +   + ++G L+T +++AG   +A+ A++GS  I EEIDA+  +G
Sbjct: 61  LLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGSTAMCADLGSRTIREEIDAMEVLG 120

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ V+ L++PR+ A  +   LL  L     I+G  +      D+    F +       + 
Sbjct: 121 INPVQRLVTPRMLAAGLVALLLNSLVVIIGIVGGYVFSVFVQDVNPGAFAAGITLLTGVP 180

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +    +KA       G+VA   G    G  + ++G  V   VV +   + +++ +    
Sbjct: 181 EVIISCVKAALFGLIAGLVACYRGLTITGGGAKAVGNAVNETVVYAFMSLFVVNVVVTAI 240


>gi|108800638|ref|YP_640835.1| hypothetical protein Mmcs_3672 [Mycobacterium sp. MCS]
 gi|119869777|ref|YP_939729.1| hypothetical protein Mkms_3745 [Mycobacterium sp. KMS]
 gi|108771057|gb|ABG09779.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
 gi|119695866|gb|ABL92939.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
          Length = 285

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 50/260 (19%), Positives = 112/260 (43%), Gaps = 6/260 (2%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVS 166
            + + + + ++        +   I   G    ++  F+  ++ LI ++        +   
Sbjct: 13  RLARGVRRPVDVLGRLGDHMLFYIRAIGGVPHATLHFRKEIIRLIAEISMGAGTLAMIGG 72

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + +V  ++   G  +A QG   L   G E  +  L + + +R     +  + +A   G+
Sbjct: 73  TLVIVGFLTLAAGGTLAVQGFSSLGDIGIEALTGFLAAFINVRIAAPTVAGIGLAATFGA 132

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
            + A++G+M+INEEIDA+ +M +  V  L+S RI A +I++  L  +A   + + +    
Sbjct: 133 GVTAQLGAMRINEEIDALESMAIRPVEYLVSTRIAAGMIAITPLYAIAVILSFVASQFTT 192

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
              +     ++   F +     ++    ++A  MA  I +V    G+      + +G  V
Sbjct: 193 VMLFGQSAGLYDHYFDTFLNPIDLLWSFLQAVLMAITILLVHTYFGYFASGGPSGVGVAV 252

Query: 347 TTCVVQSISIVIIIDSLFAI 366
              V  S+ +V+ +  L ++
Sbjct: 253 GNAVRTSLILVVSVTLLVSL 272


>gi|119386398|ref|YP_917453.1| hypothetical protein Pden_3690 [Paracoccus denitrificans PD1222]
 gi|119376993|gb|ABL71757.1| protein of unknown function DUF140 [Paracoccus denitrificans
           PD1222]
          Length = 252

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 62/261 (23%), Positives = 116/261 (44%), Gaps = 10/261 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N     G+  +     +          ++  G+  A           L RQ+  +G   +
Sbjct: 2   NPIRLTGRAAIGLTRMTGQVTIFAARGLARVGQHPA----------ELARQVVQIGWLSL 51

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
           PVV L +  TGA +A Q      +F A      +++I   RE+G +L  +M+A R  SAI
Sbjct: 52  PVVGLTALFTGAALALQIHSGGERFQAGDVVPAIVAIGMARELGPVLGGLMVAARVASAI 111

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AE+G+M++ E+IDA+ T+  D V  L+SPR+WA ++ +P+L  + +   I+G  ++   
Sbjct: 112 AAELGTMRVTEQIDALVTLSTDPVGWLVSPRLWAALLCVPMLVGVGDVIGIMGGWLIGVN 171

Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
                 A++ S   +     ++ +GL+K       + +     G      +  +G+  T 
Sbjct: 172 ALGFNSAIYLSNSWAYLESWDVVSGLLKGAVFGLIVALSGCWFGMTAAGGAAGVGRATTN 231

Query: 349 CVVQSISIVIIIDSLFAIFYF 369
            VV +   ++  +      +F
Sbjct: 232 AVVAASVGILAANFALTGLFF 252


>gi|183984020|ref|YP_001852311.1| integral membrane protein YrbE3A_1 [Mycobacterium marinum M]
 gi|183177346|gb|ACC42456.1| conserved hypothetical integral membrane protein YrbE3A_1
           [Mycobacterium marinum M]
          Length = 255

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 104/249 (41%), Gaps = 4/249 (1%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           V       +      + +          + ++ +    I Q ++V    +   ++++   
Sbjct: 5   VAVAKPLRAFGGFYSMALDTFVAMVHPPFAWREY----IAQAWFVARVSLLPTLMLTIPY 60

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
             ++       L++ GA  FS    ++  +R+IG ++T +++AG   +A+ A++G+  I 
Sbjct: 61  TVLLTFIENILLTEIGAADFSGTGAALGSVRQIGPIVTVLVVAGAGATAMCADLGARTIR 120

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE+DA+R MG+D ++ L+ PR+ A       L+       + GA         +    F 
Sbjct: 121 EELDALRVMGVDPIQALVVPRVLAATTVSLALSASVILVGLSGAYFFCVFIQHVSPGAFA 180

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +         ++   L+KA     + G++A  +G +VG     +G  V   VV +   + 
Sbjct: 181 AGLTLIIGTTDVVIALVKAALFGLSAGLIACYKGISVGGGPAGVGNAVNETVVFTFMALF 240

Query: 359 IIDSLFAIF 367
            I+ +    
Sbjct: 241 AINIVATAV 249


>gi|120401973|ref|YP_951802.1| hypothetical protein Mvan_0958 [Mycobacterium vanbaalenii PYR-1]
 gi|119954791|gb|ABM11796.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 285

 Score =  161 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 106/253 (41%), Gaps = 6/253 (2%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVILISFVT 178
                H+L   +        +   ++   + L+  + +      VG     V +++    
Sbjct: 25  LVRLGHMLVFFVRALHGLPVALRHYRKEFVRLLSDIAWGNGSLVVGGGTAGVAVVLGITV 84

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA++  +G   L   G    +  + S++  RE+  +  ++  A ++G    A++GSM+I 
Sbjct: 85  GALVGIEGYNFLDLLGLGPATGIISSLVNTRELAPIAASLAFATQAGCRFTAQLGSMRIA 144

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+ ++G+  +  L++ R+ A ++++  L +L    + +   IV+          + 
Sbjct: 145 EEIDALESLGIRPIPYLVTTRLMASVVAVIPLYVLCLAVSYLTTQIVVQIISGGSAGSYL 204

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
             F    +  +I   ++K          +    GF        +G      +  SI++VI
Sbjct: 205 HYFTLMLSGQDILYSVLKTVIFVWIASTIQCYYGFYASGGPVGVGVAAGHAMRASITVVI 264

Query: 359 IIDSLFAIFYFAI 371
           +++ L  +  +++
Sbjct: 265 MVNMLLTMALWSV 277


>gi|226304447|ref|YP_002764405.1| YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229494370|ref|ZP_04388133.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
 gi|226183562|dbj|BAH31666.1| putative YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229318732|gb|EEN84590.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
          Length = 254

 Score =  161 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 99/239 (41%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G     + +   + +         I Q ++V    +   +L++     +++     
Sbjct: 9   LRAVGGFFQMSAQTLRAVFSRPFQRQEFIDQAWFVARVSMVPTVLVAIPFTVLVSFTINI 68

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L + GA   S    ++  + ++G ++T +++AG   +AI A++ +  I EEIDA++ +G
Sbjct: 69  LLREIGAADLSGAGAALGTVTQVGPIVTVLIVAGAGATAICADLSARTIREEIDAMKVLG 128

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ +  L+ PR+ A      LL  L     I+G  +      D+    F +         
Sbjct: 129 INPIHRLVVPRVLASTGVALLLNGLVCTIGILGGFVFSVFIQDVNPGAFVNGITLLTGFG 188

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   ++KA       G+VA   G  V   + S+G  V   VV +   + +++ L    
Sbjct: 189 ELMLSMVKAGLFGMIAGLVAAYLGLNVKGGAKSVGDAVNQTVVFAFMALFVVNVLITTI 247


>gi|120403834|ref|YP_953663.1| hypothetical protein Mvan_2850 [Mycobacterium vanbaalenii PYR-1]
 gi|119956652|gb|ABM13657.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 282

 Score =  161 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 53/264 (20%), Positives = 113/264 (42%), Gaps = 10/264 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------ 162
            L   IG+ +   +          G  ++           ++  ++ L+ ++        
Sbjct: 10  RLAQQIGRPV-GALGRIGDHTSFYGRALAGVPHAAMH---YRKEIIRLVAEISMGAGTLA 65

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           +    + +V  ++   G  +A QG   L   G E  +  L + + +R    ++  + +A 
Sbjct: 66  MIGGTIVIVGFLTLAAGGTLAVQGYSSLGDIGIEALTGFLAAFINVRISAPVVAGIGLAA 125

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
             G+ + A++G+M+INEEIDA+ TMG+  V  L+S RI A +I++  L  +A   +   +
Sbjct: 126 TFGAGVTAQLGAMRINEEIDALETMGIRPVEYLVSTRIVAGMIAITPLYSIAVMLSFAAS 185

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
            +     +     ++   F +     ++    ++A  MA A+ +V    G+      + +
Sbjct: 186 KLTTVVLFGQSAGLYNHYFTTFLNPRDLLWSFLQAILMAMAVLLVHTYFGYFATGGPSGV 245

Query: 343 GKKVTTCVVQSISIVIIIDSLFAI 366
           G  V   V  S+ +VI +  L ++
Sbjct: 246 GVAVGNAVRTSLIVVISVTLLVSL 269


>gi|317508867|ref|ZP_07966506.1| hypothetical protein HMPREF9336_02878 [Segniliparus rugosus ATCC
           BAA-974]
 gi|316252828|gb|EFV12259.1| hypothetical protein HMPREF9336_02878 [Segniliparus rugosus ATCC
           BAA-974]
          Length = 315

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 52/301 (17%), Positives = 123/301 (40%), Gaps = 5/301 (1%)

Query: 71  LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAH 130
              VS   ++L +  + + +    ++    S   +        +G  +V  I  + S   
Sbjct: 6   PDDVSLGEDRLDAGTADSGKGAKSSEADTPSASPDKPGFAEQCVG-AVVGGIRQADSSLQ 64

Query: 131 ILGLVISNTGEFCA----SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
            +G ++  +            + +      + Q  ++        +L+S   G +++ Q 
Sbjct: 65  TVGRLVVLSLHAFRFLAVDLIRLQHPWRETVSQCAFLIRVTATPALLMSVPFGVILSVQV 124

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
              + Q GA   S  +  +  +++   ++ A+++ G +GSA+  ++G+  I EEIDA+  
Sbjct: 125 NSLVKQIGAVSMSGAVGGMGVMQQGAPIVAALLLGGAAGSAVATDLGARSIREEIDAMLV 184

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG++ VR L+SPR+ A++   PLL +   F  +    ++           + + F + A 
Sbjct: 185 MGINPVRRLVSPRLAAILFVAPLLCVFIIFMGLAAGYVIAIVGMSGTPGSYIASFSAFAR 244

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           + ++   LIK+        ++A + G      +  +       VV  +  ++ ++ +   
Sbjct: 245 VEDMAVALIKSLLFGVVAILIACQRGLETRGGARGVADAANASVVLGVISIVGMNLVLTE 304

Query: 367 F 367
            
Sbjct: 305 L 305


>gi|126436744|ref|YP_001072435.1| hypothetical protein Mjls_4172 [Mycobacterium sp. JLS]
 gi|126236544|gb|ABN99944.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 257

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 53/243 (21%), Positives = 108/243 (44%), Gaps = 4/243 (1%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +      + +    +     + ++ FLL    Q ++V    +   I+++     +   
Sbjct: 13  MRALGGFFAMSLDAFVQMFRPPFAWREFLL----QTWFVARVALFPTIMLAIPFTVLTVF 68

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                L + GA  FS    ++  + +IG ++T ++IAG   +A+ A++G+  I EEIDA+
Sbjct: 69  TINVLLVEIGAADFSGTGAALGAVTQIGPIVTVLVIAGAGATAMCADLGARTIREEIDAL 128

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R +G++ ++ L+ PRI A  +   +LT L     I+G+ I    + ++    F +     
Sbjct: 129 RVLGINPIQALVVPRIVAATVVSLMLTSLVTMVGIVGSFIFSVYFQNVTPGAFAAGLTLL 188

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
                +   L+KA     A  ++A  +G +VG     +G  V   VV +   + +I+ + 
Sbjct: 189 VGTPEVVVNLLKAAIFGLAASLIACYKGISVGGGPQGVGNAVNETVVYTFMALFVINVIA 248

Query: 365 AIF 367
              
Sbjct: 249 TAV 251


>gi|120401160|ref|YP_950989.1| hypothetical protein Mvan_0132 [Mycobacterium vanbaalenii PYR-1]
 gi|119953978|gb|ABM10983.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 265

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 46/240 (19%), Positives = 95/240 (39%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +G  +        ++ +        I Q +++        + +S     ++     
Sbjct: 18  GLEAVGGFVRMCVLVGKATLRPPFQWREFILQSWFLMRVAFLPTLAVSIPLTVLLIFTLN 77

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L++FGA   S    +I  + ++G L+T +++AG   +AI A++G+  I EEIDA+  +
Sbjct: 78  ILLAEFGAADVSGAGAAIGAVTQLGPLVTVLVVAGAGSTAICADLGARTIREEIDALEVL 137

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+D +  L+ PR+ A      LL        ++G  I      ++    + S       L
Sbjct: 138 GIDPIHRLVVPRVVASTFVAILLNGAVITVGLVGGFIFGVYLQNVSAGAYVSTLTLITGL 197

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             +   ++KA       G+V    G  V   +  +G  V   +V  +  +  ++ +    
Sbjct: 198 PEVVISIVKAATFGLIAGLVGCYRGLTVAGGAKGVGTAVNETLVLCVIALFAVNVVLTTI 257


>gi|296163926|ref|ZP_06846562.1| integral membrane protein YrbE2a [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295900707|gb|EFG80077.1| integral membrane protein YrbE2a [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 243

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 48/239 (20%), Positives = 103/239 (43%), Gaps = 4/239 (1%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
                 +   TG+  A  ++++ F+L    Q +++        ++++     +I      
Sbjct: 1   MASFTQMCVLTGKALARPFQWREFIL----QGWFLLGVSFLPTVMVAIPLTVLIIFTLNI 56

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L++FGA   S    ++  + ++G L+T +++AG   +AI A++G+  I EEIDA+  +G
Sbjct: 57  LLAEFGAADVSGAGAALGAVTQLGPLVTVLVVAGAGSTAICADLGARTIREEIDAMEVLG 116

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +D +  L+ PR+ A  I   LL        ++G  +      ++    + S       L 
Sbjct: 117 IDPIHRLVVPRVVASTIVALLLNGAVISIGLVGGFLFGVYIQNVSAGAYVSTLTLITGLP 176

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   ++KA       G+V    G   G  +  +G  V   +V ++  +  ++ +    
Sbjct: 177 EVLISIVKATLFGLIAGLVGCYRGLTAGGGAKGVGTAVNETLVLAVVALFAVNVVLTTI 235


>gi|311743965|ref|ZP_07717771.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Aeromicrobium marinum DSM 15272]
 gi|311313095|gb|EFQ83006.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Aeromicrobium marinum DSM 15272]
          Length = 275

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 49/229 (21%), Positives = 97/229 (42%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           K  +   +   ++ L I             K        Q +++        +L++   G
Sbjct: 18  KTFDGIDTFGAMVILGIGALRYIATDIVTRKFSWKEFYDQAWFMTRVAFLPTVLVAIPFG 77

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            +IA Q      Q GA  F+  +  I  LR+   L+T++++AG  GSAI A++G+  + E
Sbjct: 78  IIIAIQVGAVAQQIGAVSFTGAVNGIGILRQAAPLVTSLLMAGAVGSAICAQLGAQTVRE 137

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DA++ MGL+ V+ +++PR+ A ++   LL +    +A++   ++      +    +  
Sbjct: 138 EVDAMKVMGLNPVQRIVAPRVAAAMVVGALLNVFVAATAMVTGYLINVGGGAVSSGAYLG 197

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
            F + A   ++     KA        I+A  +G         +   V  
Sbjct: 198 SFIAFAQPTDLLLAEGKAVIFGFLATIIAAHKGLNASGGPKGVADAVNQ 246


>gi|296141836|ref|YP_003649079.1| hypothetical protein Tpau_4171 [Tsukamurella paurometabola DSM
           20162]
 gi|296029970|gb|ADG80740.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM
           20162]
          Length = 285

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 105/260 (40%), Gaps = 6/260 (2%)

Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLI------RQMYYVGV 165
             +G+             H++G  +        ++  +    +S +      R    VG 
Sbjct: 12  RTLGRVYTWLRGVLARLGHMMGFCVQAVIMIPHAARHYSRQTISTVTDLTWGRGAVIVGG 71

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
               +++++    G  +A Q    L   G    +  + ++  +RE   +L A   A ++G
Sbjct: 72  GTSLMMVVLGLAVGGTVAVQAFSTLDLLGMGPLTGSISALANIREFAPILAAAGFAVQAG 131

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
             + AEIG+M+INEEIDA+ ++GL  +  ++S R+ A +I++    ++A   +    S++
Sbjct: 132 CRMTAEIGAMRINEEIDALESLGLRSISFVVSTRVLAGLIAVIPTFLIAIVVSFFACSVI 191

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
           +          +   F    +  ++    +K       + ++   +GF        +G  
Sbjct: 192 VTVVQGESAGAYTHYFRQFLSGPDLLASTVKVIVFLIVVILIHCYQGFFAAGGPEGVGVA 251

Query: 346 VTTCVVQSISIVIIIDSLFA 365
               V  S+  ++++D L  
Sbjct: 252 SGRAVRASLVSIVVLDMLLT 271


>gi|229494350|ref|ZP_04388113.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
 gi|229318712|gb|EEN84570.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
          Length = 284

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/250 (25%), Positives = 108/250 (43%), Gaps = 4/250 (1%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSY----KFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           N   +    +GL+ + T   C +++      +      + QM+++         L+    
Sbjct: 25  NMFSNLLSEIGLLFTFTVRVCVAAFTSLRHKRLAWREALDQMWFLAHVTSVASALVMIPL 84

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G  +A Q      Q GA  +S  +++ L + + G L+ A++IAG  GSAI A++G+  I 
Sbjct: 85  GVGVALQIGALADQIGAGAYSGAVVAFLIIGQAGPLVCALIIAGVGGSAICADLGARTIR 144

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+  +GL  +  L+ PR+ A+ +   LL  +     +  +  V     D     F 
Sbjct: 145 EEIDALEVLGLPVLERLVVPRMIAIAVVCLLLNSIVLVIGLGASLFVHVLILDGNAQSFL 204

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
                 +  ++     IKA   A   GIVA  +G  V   +  +G  V   VV S  +V 
Sbjct: 205 RNLVQFSQPSDFVVSGIKAVAFALISGIVACYKGLTVKRGAQGVGDAVNETVVLSFVLVF 264

Query: 359 IIDSLFAIFY 368
           + +     FY
Sbjct: 265 VANLAITQFY 274


>gi|289642565|ref|ZP_06474708.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
 gi|289507653|gb|EFD28609.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
          Length = 286

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 59/279 (21%), Positives = 111/279 (39%), Gaps = 6/279 (2%)

Query: 93  IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGF 152
                  R     +  N+       + + I D      +L  ++S       +  + +G+
Sbjct: 6   AAGPSRHRPRSSPAVTNVMIKFPPSLQRVIVDVGQSGQLLAQLVST------AVRQPRGY 59

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
                 +MY +         L       +I       L+  GA+     +      REI 
Sbjct: 60  WAETRDEMYAMLRFCWLSCTLAVGGFCFLIGNYAYNILTLLGAQNRLGTVFVFASAREIS 119

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
              T + +AG  G+A+ A++G+ +I EE+DA++ +GLD +R+L+ PR+ A+ +      I
Sbjct: 120 PFCTGMAVAGVMGTALTADLGARRIREELDAMKVLGLDAMRVLVLPRVIAITVMTAAFNI 179

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           +     +  A I      D     FFS F S  T+ ++   ++K   +   IGIV  ++G
Sbjct: 180 VGVAVGVAMAMISGTVIGDTSAGSFFSVFLSNVTVPDLVGTVVKTVLIGFFIGIVCAQKG 239

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
                    +G+ V   VV   + V +I+ +       +
Sbjct: 240 LNARGGPEGVGRAVNEAVVLCFAAVWVINFVANAVLLGL 278


>gi|148263953|ref|YP_001230659.1| hypothetical protein Gura_1896 [Geobacter uraniireducens Rf4]
 gi|146397453|gb|ABQ26086.1| protein of unknown function DUF140 [Geobacter uraniireducens Rf4]
          Length = 258

 Score =  160 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 71/258 (27%), Positives = 129/258 (50%), Gaps = 3/258 (1%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   +G+ I+  I D      I+     N           +      ++Q+Y+ G+  + 
Sbjct: 1   MITALGRWIIYRILDLSDLVDIILQACINIPATIRYGR--RPVFTVFMKQVYFTGLEALK 58

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V+++IS   G VI  Q    L   G EI +  ++  + +RE+G LLTA+++  RSG+AI 
Sbjct: 59  VIVVISLTIGVVIITQI-ISLVGAGNEILTGKVLIWVVIRELGPLLTAIVVIARSGTAIA 117

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
            E+G MKIN EI++I ++G+   + LI PRI+ +  ++ +LTI    ++I G  IV    
Sbjct: 118 TELGYMKINNEIESIESLGIPAGQYLIMPRIFGVTTAVMILTIYFEIASIFGGFIVASIG 177

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
           + +PF  F     ++ TL  +   + K+ F    +     K+G  VG  +  + +  T  
Sbjct: 178 WHVPFDRFSEGVFTSLTLKELGRSVAKSFFFGLFLSAACCKQGLGVGKSATQIPQAATKG 237

Query: 350 VVQSISIVIIIDSLFAIF 367
           V+QS+ +V ++D +  + 
Sbjct: 238 VMQSLFLVFLLDGIITVV 255


>gi|111023083|ref|YP_706055.1| ABC transporter membrane protein [Rhodococcus jostii RHA1]
 gi|110822613|gb|ABG97897.1| possible ABC transporter integral membrane protein [Rhodococcus
           jostii RHA1]
          Length = 269

 Score =  160 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 52/242 (21%), Positives = 104/242 (42%)

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
            ++G  I+ T        + K     L+ Q + +        +L+    G +IA      
Sbjct: 21  ALIGFSIATTVAAVRVLVRRKLAWRELLDQAWRLASVTSAPALLLMIPIGVLIAVTIGSL 80

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
             Q GAE ++  ++  + + +   L+ A+M+AG  GSAI A++GS  I EE++A+  +GL
Sbjct: 81  AGQLGAEGYTGAVVGFVIVGQASALVCALMLAGVGGSAICADLGSRTIREEVEAMEVLGL 140

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
           + +  L+ PR+ A +I    L  +     +    +      +     F +       L++
Sbjct: 141 NVIERLVVPRVLAAVIVGIALCAMVTAVGVSACFLFQVIVQNSSAGSFLTALSQYTRLSD 200

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               L+K+   A    +VA  +G       + +   V   VV +  +V I++++ +  Y 
Sbjct: 201 FVVALVKSMAFAVTSALVASFKGLHAKGGPSGVADAVNEAVVLAFILVFIVNTVLSQLYS 260

Query: 370 AI 371
            +
Sbjct: 261 VL 262


>gi|126437565|ref|YP_001073256.1| hypothetical protein Mjls_5001 [Mycobacterium sp. JLS]
 gi|126237365|gb|ABO00766.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 280

 Score =  160 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 55/266 (20%), Positives = 112/266 (42%), Gaps = 9/266 (3%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVG 164
              + + +   ++    QA   G  I           +++   + LI +M        + 
Sbjct: 9   LRRVFRWVPGAVDTVGEQALFYGETIRYIPNALT---RYRKETIRLIAEMTMGAGALVMI 65

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
              V V   ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   
Sbjct: 66  GGTVGVAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAGIALAATI 125

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           G+   A++G+M++ EEIDA+ TM +  V  L+S R+ A +I++  L  L+  +A   A  
Sbjct: 126 GAGTTAQLGAMRVAEEIDAVETMAVHSVSYLVSTRLMAGLIAIVPLYSLSVLAAFFAARF 185

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
                      ++   F++    +++    ++A  M+ A+ +V    G+        +G 
Sbjct: 186 TTVFINGQSAGLYDHYFNTFLVPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGPVGVGI 245

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370
            V   V  S+ +V+ I    ++  + 
Sbjct: 246 AVGQAVRTSLIVVVTITLFISLAVYG 271


>gi|118473565|ref|YP_887174.1| hypothetical protein MSMEG_2854 [Mycobacterium smegmatis str. MC2
           155]
 gi|118174852|gb|ABK75748.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
           155]
          Length = 281

 Score =  160 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 54/261 (20%), Positives = 113/261 (43%), Gaps = 9/261 (3%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVP 169
           ++ V             G  ++ T         ++  ++ LI ++        +    V 
Sbjct: 15  RRPVDVAGRLGDHTSFYGRALAGTPHAAMH---YRREVIRLIAEISMGAGTLAMIGGTVV 71

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +V  ++   G  +A QG   L   G E  +  L + + +R    ++  + +A   G+ + 
Sbjct: 72  IVGFLTLAAGGTLAVQGYSSLGNIGIEALTGFLAAFINVRISAPVVAGIGLAATFGAGVT 131

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A++G+M+INEEIDA+ +MG+  V  L+S RI A ++++  L  +A   +   +++     
Sbjct: 132 AQLGAMRINEEIDALESMGIRPVEYLVSTRIVAGMVAITPLYAVAVILSFAASNLTTVVM 191

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
           +     ++   F +     ++    ++A  MA AI +V    GF      + +G  V   
Sbjct: 192 FGQSAGLYNHYFSTFLNPVDLLWSFLQAILMAIAILLVHTYFGFFAAGGPSGVGVAVGNA 251

Query: 350 VVQSISIVIIIDSLFAIFYFA 370
           V  S+ +VI +  L ++  + 
Sbjct: 252 VRTSLIVVIAVTLLVSLAVYG 272


>gi|223937195|ref|ZP_03629102.1| protein of unknown function DUF140 [bacterium Ellin514]
 gi|223894217|gb|EEF60671.1| protein of unknown function DUF140 [bacterium Ellin514]
          Length = 311

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 50/261 (19%), Positives = 115/261 (44%), Gaps = 5/261 (1%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ-MYYVGVSGVPVV 171
           + G+K+++F+             +   G       + +  +  LI Q +   GV  +P+ 
Sbjct: 54  YFGRKVIRFLLTIQGLGAFF---LITLGVIFTKFRRARSVVWPLIWQELNRSGVKLLPMF 110

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
           + +S   G V+  Q    L++  A  +   +M ++ +REIG +LTA+++  R+G++ V E
Sbjct: 111 LFLSLAMGLVVIGQAVSWLTRVNAVQYLGTIMVLVVVREIGPMLTALLVLARAGTSNVIE 170

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY-Y 290
           +G+ +   E++A+  + +D +  L+ PR+  + I +  LT+     +++   +  +    
Sbjct: 171 LGTARALGEVEALEALVIDPIHYLVMPRVIGMAIGVFSLTVYFILGSLLSGYMWAFLQDV 230

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
            +    +F +     +  +      K+      I ++    G A  +    +       V
Sbjct: 231 PLRPTDYFEQLAGALSYTDFIVLGTKSILFGVIISVITCYHGLAQPLQLEEVSNATVRAV 290

Query: 351 VQSISIVIIIDSLFAIFYFAI 371
            QS+   + +D+LF + Y  +
Sbjct: 291 AQSVIACVALDALFIVIYLVL 311


>gi|302327111|gb|ADL26312.1| putative ABC transporter, permease protein [Fibrobacter
           succinogenes subsp. succinogenes S85]
          Length = 262

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 56/250 (22%), Positives = 111/250 (44%), Gaps = 9/250 (3%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              ++ L +         S+ FK    ++I Q ++ GV   P +  ++ + G V+     
Sbjct: 1   MGQLIALFLRTVASLFDKSHNFKSDSRNIILQTFFTGVEIFPPLFAVATLFGTVVIIYLF 60

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             + + G       L+ ++ +RE+  + TA +IAGR+GS++   IGSM IN E+DA+ TM
Sbjct: 61  SLMGKMGFSNNIGFLIVVIIIRELSPIFTAFLIAGRTGSSLTTYIGSMVINSEVDALATM 120

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV--------FFS 299
           G++ +R L+ P +    I++ ++ I+ + SAI    ++      I            + S
Sbjct: 121 GINPIRYLVMPSVIGGTIAMIIMNIIFSTSAIGAGFLLTKGIIFITGNAPNVQITWSYLS 180

Query: 300 R-FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
                  T  +    ++K       I I A  +   +      + K  +  V+ S   ++
Sbjct: 181 TEIIKALTKPDFVFAIVKPLIFGIIITINACYQALNIKRDIRQVPKATSRSVIMSFLYIV 240

Query: 359 IIDSLFAIFY 368
             D+LF +++
Sbjct: 241 FTDALFLMYF 250


>gi|262202880|ref|YP_003274088.1| hypothetical protein Gbro_2987 [Gordonia bronchialis DSM 43247]
 gi|262086227|gb|ACY22195.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247]
          Length = 288

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 97/265 (36%), Gaps = 10/265 (3%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVS-------- 166
           +               +G +I+      +S    F+ +   + R +  V           
Sbjct: 15  EAAKGLYRGPRDALAAMGHLITFLVRSISSVPLAFRHYSKEVWRLLADVAWGNGAIVVGG 74

Query: 167 -GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             V V++++  + GA +  +    L+  G    +  L +    REI  LL A     +SG
Sbjct: 75  GTVGVMVILGIMGGATVGIEAYTALNLLGMAPVTGGLSAFATTREIAPLLAATAFTAQSG 134

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
               A++GSM+I EEIDA+  + +  +  L++ R+ A ++++  L  ++  +  I   ++
Sbjct: 135 CRFTAQLGSMRIAEEIDALEAIAIRPLPYLVTTRMLAAVLAIVPLYSVSLAANYIACQVM 194

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                      +   F       ++    IK          +    G+        +G  
Sbjct: 195 FQFQSGQGAGTYLYYFTQFLVSWDVVFSFIKVIIFVLLTTFIQCYYGYFASGGPEGVGVA 254

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
               +  +I +++  + +  + ++ 
Sbjct: 255 AGHAIRLAIIVIVFANLVMTLVFWG 279


>gi|145221308|ref|YP_001131986.1| hypothetical protein Mflv_0713 [Mycobacterium gilvum PYR-GCK]
 gi|315441804|ref|YP_004074683.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|145213794|gb|ABP43198.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
 gi|315260107|gb|ADT96848.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 265

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 46/240 (19%), Positives = 96/240 (40%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +G  +        ++++        I Q +++        + +S     ++     
Sbjct: 18  GLLAVGGFVRMCVLVGKATFRTPFQWREFILQSWFLLRVAFLPTVAVSIPLTVLLIFTLN 77

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L++FGA   S    ++  + ++G L+T +++AG   +AI A++G+  I EEIDA+  +
Sbjct: 78  ILLTEFGAADISGAGAALGAVTQLGPLVTVLVVAGAGSTAICADLGARTIREEIDALEVL 137

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+D +  L+ PR+ A      LL        ++G  I      ++    + S       L
Sbjct: 138 GIDPIHRLVVPRVIASTFVAMLLNGAVITIGLVGGFIFGVYLQNVSAGAYVSTLTLVTGL 197

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             +   L+KA       G+V    G  V   +  +G  V   +V  +  +  ++ +    
Sbjct: 198 PEVLISLVKALTFGLIAGLVGCYRGLTVAGGAKGVGTAVNETLVLCVIALFAVNVVLTTI 257


>gi|118469614|ref|YP_884548.1| hypothetical protein MSMEG_0132 [Mycobacterium smegmatis str. MC2
           155]
 gi|118170901|gb|ABK71797.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
           155]
          Length = 266

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 96/243 (39%), Gaps = 4/243 (1%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +      + +          +++K F+L    Q +++        + +S     +I  
Sbjct: 20  LATVGGFFKMSVMTGKALFTRPFQWKEFVL----QSWFLIRVAFLPTLAVSIPLTVLIIF 75

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                L++FGA   S    ++  + ++G L+T +++AG   +AI A++G+  + EEIDA+
Sbjct: 76  TLNILLAEFGAADVSGAGAALGAVTQLGPLVTVLVVAGAGSTAICADLGARTVREEIDAL 135

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             +G+D +  L+ PR+ A      +L        ++G         ++    + S     
Sbjct: 136 EVLGIDPIERLVVPRVVASTFVAFMLNGAVITIGLVGGFFFGVYIQNVSAGAYVSTLTLL 195

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
                +   ++KA       G+V    G  V   S  +G  V   +V  +  +  ++ + 
Sbjct: 196 TGFPEVLISVVKATLFGMIAGLVGCYRGLTVAGGSKGVGTAVNETLVLCVVALFAVNVVL 255

Query: 365 AIF 367
              
Sbjct: 256 TTI 258


>gi|254488593|ref|ZP_05101798.1| membrane protein [Roseobacter sp. GAI101]
 gi|214045462|gb|EEB86100.1| membrane protein [Roseobacter sp. GAI101]
          Length = 254

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 54/254 (21%), Positives = 109/254 (42%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +      + +    +G V           ++   +       +  +G   +PVV L +  
Sbjct: 1   MAALGRLTLAALATIGSVTLFACSALVHIFRPPFYAGQFGTALVQIGWLSLPVVGLTALF 60

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG  +  Q     ++F AE     +++I  +RE+G +L  +M+A R  +AI AEI +MK+
Sbjct: 61  TGGALVMQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMVAARVTAAIAAEIATMKV 120

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++DA+ T+  D +R L  PR+ A ++++PLL  + +   I+G   V           +
Sbjct: 121 TEQLDALITLSTDPMRYLTVPRVLAALLAVPLLVAVGDIIGIMGGYFVATGSLGFSSGAY 180

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                +     +I + LIK         ++    G   G  +  +G+   + V  +  ++
Sbjct: 181 LRNTVNFLEPLDIASSLIKGTAFGLIAALMGCYFGLNAGRGARGVGRATKSAVEAAAILI 240

Query: 358 IIIDSLFAIFYFAI 371
           +  + +     FA+
Sbjct: 241 LAANFILTAVIFAL 254


>gi|120401387|ref|YP_951216.1| hypothetical protein Mvan_0362 [Mycobacterium vanbaalenii PYR-1]
 gi|119954205|gb|ABM11210.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 284

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 57/251 (22%), Positives = 106/251 (42%), Gaps = 9/251 (3%)

Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGV 165
           Y    ++    N+   QA      +    +      ++ G LL LI QM        V  
Sbjct: 14  YRAAHEVAAGWNELGDQARFYAGTLRAVPDAVR---RYPGELLRLIAQMGLGTGALAVVG 70

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             V +V  ++  TGA++A QG  Q +  G E  +    +   +R I    TAV ++   G
Sbjct: 71  GTVAIVGFLTITTGALVAVQGYNQFASVGVEALTGFASAFFNVRLIVPGTTAVALSATIG 130

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           +   A++G+M+INEEIDA+  +G+  V  L + R+ A ++ +  L  +A   A + A   
Sbjct: 131 AGATAQLGAMRINEEIDALEVIGIRSVTYLAATRVLAGVVVVIPLYCIAVMMAFLAARTG 190

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
               Y     V+   F++     ++    +++  +   + +V    G+        +G+ 
Sbjct: 191 TTVIYGQGSGVYDHYFNTFLNPTDLVWSFLQSVAITVVVMLVHTYYGYTARGGPAGVGEA 250

Query: 346 VTTCVVQSISI 356
           V   V  S+ +
Sbjct: 251 VGRAVRTSMVV 261


>gi|41407948|ref|NP_960784.1| hypothetical protein MAP1850 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|118466872|ref|YP_881589.1| ABC-transporter integral membrane protein [Mycobacterium avium 104]
 gi|254775058|ref|ZP_05216574.1| ABC-transporter integral membrane protein [Mycobacterium avium
           subsp. avium ATCC 25291]
 gi|41396302|gb|AAS04167.1| hypothetical protein MAP_1850 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|118168159|gb|ABK69056.1| ABC-transporter integral membrane protein [Mycobacterium avium 104]
          Length = 287

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 101/253 (39%), Gaps = 6/253 (2%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVILISFVT 178
                H+L   +        +  ++ G  L L+  + +      VG     V +++    
Sbjct: 27  VIRLGHLLVFFVRALVAVPLALRQYSGEFLRLLSNITWGNGSIVVGGGTAGVAVVLGMTV 86

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA++  +G   L   G    +  + S++  RE+  L+ ++  A + G    A++GSM+I 
Sbjct: 87  GALVGIEGYNFLDLLGLGPATGFVSSLVNTRELAPLMASLAFAMQGGCRFTAQLGSMRIA 146

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+ ++ +  +  L++ R+ A ++++  L         +   IV+          + 
Sbjct: 147 EEIDAMESIAIRPIPYLVTTRLIASVVAIVPLYAACLAIGYLSTQIVVSIGSGGSTGSYL 206

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
             F       +I   L KA         +    G+        +G      +  SI++VI
Sbjct: 207 HYFTLMLAGQDIVYSLFKAVVFVWIASTIQCYYGYYASGGPEGVGVAAGHGMRASITVVI 266

Query: 359 IIDSLFAIFYFAI 371
           I++ L  +  + +
Sbjct: 267 IVNMLLTMALWGV 279


>gi|289645180|ref|ZP_06477195.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
 gi|289505005|gb|EFD26088.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
          Length = 283

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 55/257 (21%), Positives = 107/257 (41%), Gaps = 2/257 (0%)

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
           G           S    LG +   T          + +   ++RQ   + +S   ++  +
Sbjct: 19  GTGSFGSYTGEGSLIRDLGEIARFTVTSVRRMPGVRHYGSEVLRQAGIMILSSSGIIWFM 78

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
             +  A  + +G + LSQ GA  ++    S      +   +   +++ +    +VAE+GS
Sbjct: 79  MGMLAAEASLEGHYLLSQLGAGSYTGVFTSTADYT-VAPEMWGWILSAKVACGLVAELGS 137

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV-IWKYYDIP 293
           M+I+EEIDA+  MGLD    LIS R+ A+II  P + ++          ++ +  ++ + 
Sbjct: 138 MRISEEIDALEVMGLDPHSYLISTRLLAVIIITPFMFMIGTGIMYGVQYVLNVHVFHSVS 197

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              + S F +  T  ++   L     M   I  V    G+        +GK     +V +
Sbjct: 198 AGGYLSVFWAFQTQQDVLLSLAMGAIMGMMIVTVGCYYGYTASGGPVGVGKNTAKSMVIN 257

Query: 354 ISIVIIIDSLFAIFYFA 370
           + IV ++ ++F   +F 
Sbjct: 258 LVIVSVVGAVFQQMFFG 274


>gi|254818326|ref|ZP_05223327.1| hypothetical protein MintA_00280 [Mycobacterium intracellulare ATCC
           13950]
          Length = 255

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 47/240 (19%), Positives = 104/240 (43%), Gaps = 1/240 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
           A  +G + + + +     ++        + Q +++    +   +L++     +++     
Sbjct: 9   AQAIGGLFAMSADAVKFLFQRPFQWREFLEQSWFIARVAIAPTLLVAIPFTVLVSFTLNI 68

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L + GA   S    +   + +IG ++T +++AG   +A+ A++GS  I EEIDA+  +G
Sbjct: 69  LLRELGAADLSGAGAAFGAVTQIGPMVTVLIVAGAGSTAMCADLGSRTIREEIDAMEVLG 128

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ V+ L++PR+ A  +   LL  L     I+G         D+    F +       + 
Sbjct: 129 INPVQRLVTPRMLAAGLVALLLNSLVVIIGIVGGYAFSVFIQDVNPGAFAAGITLLTGVP 188

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +    +KA       G+VA   G    G  + ++G  V   VV +   +++++ +    
Sbjct: 189 EVIISCVKAALFGLIAGLVACYRGLTITGGGAKAVGNAVNETVVYAFMSLMVVNVVVTAI 248


>gi|118469369|ref|YP_889051.1| ABC transporter transmembrane protein [Mycobacterium smegmatis str.
           MC2 155]
 gi|118170656|gb|ABK71552.1| ABC-transporter integral membrane protein [Mycobacterium smegmatis
           str. MC2 155]
          Length = 282

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 48/226 (21%), Positives = 98/226 (43%), Gaps = 6/226 (2%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVILISFVTGAVIAQQGA 187
             +        ++  ++  L+ LI ++        +    V +V  ++  TG V+A QG 
Sbjct: 31  FYLRAIAGTPHAALHYRKELVRLIAEISMGAGTLAMIGGTVVIVGFLTLATGGVLAIQGY 90

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L   G E  +  L + + +R    ++  + +A   G+ + A++G+M+INEEIDA+ +M
Sbjct: 91  SSLGNIGIEALTGFLSAFINVRIAAPVVAGIGLAATFGAGVTAQLGAMRINEEIDALESM 150

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
            +  V  L+S RI A +I++  L  +A   + + +             ++   F +    
Sbjct: 151 AIRPVEYLVSTRIVAGMIAITPLYAIAVILSFLASQFTTVVLLGQSGGLYNHYFDTFLNP 210

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
            ++    ++A  MA  I ++    G+      + +G  V   V  S
Sbjct: 211 IDLLWSFLQAILMAITILLIHTYFGYFASGGPSGVGVAVGNAVRTS 256


>gi|296169578|ref|ZP_06851198.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295895844|gb|EFG75539.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 287

 Score =  159 bits (403), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 102/249 (40%), Gaps = 10/249 (4%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVSG-------- 167
           ++ + I         +G      G+  A   +  + +   +IR +  + +          
Sbjct: 15  RLTRQIEKPVGTLGRIGDHTLFYGKALAGVPFAVRHYRREVIRLIAEISMGAGTLAMIGG 74

Query: 168 -VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + +V  ++   G  +A QG   L   G E  +  L + + +R    ++  + +A   G+
Sbjct: 75  TLVIVGFLTLAAGGTLAVQGYSSLGNIGIEALTGFLAAFINVRIAAPIVAGIGLAATFGA 134

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
            + A++G+M+INEEIDA+ +M +  +  L+S RI A ++++  L  +A   + + +    
Sbjct: 135 GVTAQLGAMRINEEIDALESMAIRPISYLVSTRIAAGMMAITPLYSIAVILSFLASQFTT 194

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
              +     ++   F +     ++    ++A  MA  I ++    G+        +G   
Sbjct: 195 VVLFGQSGGLYQHYFTTFLNPIDLLWSFLQAVLMAITILLIHTYFGYFASGGPAGVGVAT 254

Query: 347 TTCVVQSIS 355
              V  S+ 
Sbjct: 255 GNAVRTSLI 263


>gi|226304168|ref|YP_002764126.1| YrbE family protein [Rhodococcus erythropolis PR4]
 gi|226183283|dbj|BAH31387.1| putative YrbE family protein [Rhodococcus erythropolis PR4]
          Length = 259

 Score =  159 bits (403), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 62/248 (25%), Positives = 107/248 (43%), Gaps = 4/248 (1%)

Query: 125 SCSQAHILGLVISNTGEFCASSY----KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
             +    +GL+ + T   C +++      +      + QM+++         L+    G 
Sbjct: 2   FSNLLSEIGLLFTFTVRVCVAAFTTLRHKRLAWREALDQMWFLAHVTSVASALVMIPLGV 61

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
            +A Q      Q GA  +S  +++ L + + G L+ A++IAG  GSAI A++G+  I EE
Sbjct: 62  GVALQIGSLADQIGAGSYSGAVVAFLIIGQAGPLVCALIIAGVGGSAICADLGARTIREE 121

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+  +GL  +  L+ PR+ A+ +   LL  +     +  +  V     D     F   
Sbjct: 122 IDALEVLGLPVLERLVVPRMIAIAVVCLLLNSIVLVIGLGASLFVHVLILDGNAQSFLRN 181

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
               +  ++     IKA   A   GIVA  +G  V   +  +G  V   VV S  +V + 
Sbjct: 182 LVQFSQPSDFVVSGIKAVAFALISGIVACYKGLTVKRGAQGVGDAVNETVVLSFVLVFVA 241

Query: 361 DSLFAIFY 368
           +     FY
Sbjct: 242 NLAITQFY 249


>gi|120402601|ref|YP_952430.1| hypothetical protein Mvan_1595 [Mycobacterium vanbaalenii PYR-1]
 gi|119955419|gb|ABM12424.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 280

 Score =  159 bits (403), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 52/266 (19%), Positives = 111/266 (41%), Gaps = 9/266 (3%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VG 164
                +   + ++    QA   G  +++          ++     LI +M +      V 
Sbjct: 9   LRRAFRHTPRLVDIFGEQALFYGQSLASLPLAVRL---YRRETARLIAEMAFGAGGLLVI 65

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
              + V + ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   
Sbjct: 66  GGTLGVTVFLTLASGGVIAVQGYASLGDIGIEALTGFLSAFLNVRIVAPVIAGIALAATI 125

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           G+   A++G+M+I EEIDA+  M +  +  L++ R+ A +I +  L  LA  ++   A  
Sbjct: 126 GAGSTAQLGAMRIAEEIDALEVMAVRSMAYLVATRMIAGVIVIVPLYSLAILTSFFSARF 185

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
                      ++   F++     ++    ++A  M+ A+ +V    G+        +G 
Sbjct: 186 TTVYLSGQSRGLYDHYFNTFLIPTDLLWSFLQAIAMSIAVMLVHTYYGYNAKGGPVGVGV 245

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370
                V  S+ +V++I  L ++  + 
Sbjct: 246 ATGDAVRTSLIVVVVITLLISLAVYG 271


>gi|183983838|ref|YP_001852129.1| integral ABC-type transport protein [Mycobacterium marinum M]
 gi|183177164|gb|ACC42274.1| conserved hypothetical integral ABC-type transport protein
           [Mycobacterium marinum M]
          Length = 287

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 51/273 (18%), Positives = 112/273 (41%), Gaps = 10/273 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCA----SSYKFKGFLLSLIRQMYY-- 162
                I +++V+    +      LG ++       A    +  +++G  L L+  + +  
Sbjct: 7   RPLAPITEQVVRLYRRTTKPIIRLGHMLVFFFRALAGVPIAVRQYRGEFLRLLSNITWGN 66

Query: 163 ----VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
               VG     V +++    GA++  +G   L   G    +  + S++  RE+  L+ ++
Sbjct: 67  GSIVVGGGTAGVAVVLGMTVGALLGIEGYNFLDLLGLGPATGLISSLVNTRELAPLMASL 126

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
             A ++G    A++GSM+I EEIDA+ ++ +  +  L++ R+ A I+++  L        
Sbjct: 127 AFAMQAGCRFTAQLGSMRIAEEIDAMESIAIRPIPFLVTTRLVASIVAMIPLYAACLAIG 186

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
            +   +V+          +   F       +IF  L+K          +    GF     
Sbjct: 187 YLTTQVVVGISSGGSTGSYLHYFSLMLAGQDIFYSLLKTVIFVWIASTIQCYYGFYASGG 246

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
              +G      +  SI++VI+++ L  +  + +
Sbjct: 247 PEGVGVAAGHGMRASITVVIMVNMLITMALWGV 279


>gi|312137896|ref|YP_004005232.1| integral membrane protein yrbe1b [Rhodococcus equi 103S]
 gi|325673337|ref|ZP_08153029.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Rhodococcus equi ATCC 33707]
 gi|311887235|emb|CBH46544.1| putative integral membrane protein YrbE1B [Rhodococcus equi 103S]
 gi|325555927|gb|EGD25597.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Rhodococcus equi ATCC 33707]
          Length = 285

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 108/261 (41%), Gaps = 9/261 (3%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPV 170
            +V  + D           + +         +++  +L+ I ++ +       G   + +
Sbjct: 19  AVVDGLADVGRHVTFFFRTLVSLPYAAT---RYRKHVLAQISEVSFGTNSVLSGGGTIGI 75

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           V  +S     ++  +    L   G    S  L +I   RE+  ++ A+ +A + G+   A
Sbjct: 76  VFAMSLAAAMMLGVETQRGLELVGMTTLSGMLSAIANTRELAPVVVAIALAAKVGTGFTA 135

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           ++G+M+I++EIDA+ +MG+  +  L   R+ A ++ +  + ++   ++ +   +VI  + 
Sbjct: 136 QLGAMRISDEIDALDSMGVRSIPFLAGTRVLAAMVCVLPIFMIGLLASYLSTRLVIVVWG 195

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
                 +   FH   +  ++    IKA   A  + +V    G+        +G+     +
Sbjct: 196 GASAGTYDYFFHLALSPVDLVYAAIKAIVFAGVVALVHCSYGYFASGGPAGVGQAAGRAL 255

Query: 351 VQSISIVIIIDSLFAIFYFAI 371
             +I  + ++D L     + +
Sbjct: 256 RTAILAIGVLDVLMTFALWGL 276


>gi|296141464|ref|YP_003648707.1| hypothetical protein Tpau_3790 [Tsukamurella paurometabola DSM
           20162]
 gi|296029598|gb|ADG80368.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM
           20162]
          Length = 284

 Score =  159 bits (402), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 88/199 (44%)

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
           ++   +GA +A +    L+  G    +  +  +  +RE+  +   +  A ++G  + A+I
Sbjct: 78  ILGAASGAAVAIEAYAGLNLIGFGPLTGVIGGLANIREMIPISAGIGFAAQAGCRMTAQI 137

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           GSM+I EEIDA+  +G+  +  ++S R+ A I+ +    +L    A +   +++  ++  
Sbjct: 138 GSMRIAEEIDAVEALGIRSIPYVVSTRLIAGIVVVIPAYLLTLLLAFLTCKLIVVVFHGQ 197

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
               +   F    +  +I    +KA     A+ I+    G+        +G      V  
Sbjct: 198 AQGTYNHYFEQFLSPGDILLSTVKAVVFCAAVTIIHCYYGYFAKGGPEGVGLASGRAVRA 257

Query: 353 SISIVIIIDSLFAIFYFAI 371
           S+  V+ +D +  I  + +
Sbjct: 258 SLVTVLTLDFILTIVMWGV 276


>gi|226306858|ref|YP_002766818.1| YrbE family protein [Rhodococcus erythropolis PR4]
 gi|226185975|dbj|BAH34079.1| putative YrbE family protein [Rhodococcus erythropolis PR4]
          Length = 257

 Score =  159 bits (402), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 47/243 (19%), Positives = 98/243 (40%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG       +     ++ +  +   + Q + +    +   +L++     +++ 
Sbjct: 8   LAGPMRELGQFYRMGADVAVGLFRTRFQVQEFLEQSWMIARVSIVPTVLVAVPFTVLVSF 67

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                L + GA   S    ++  + ++G ++T +++AG   +AI A++GS  I EEIDA+
Sbjct: 68  TLNILLREIGAADLSGAGAALGAVTQVGPVVTVLIVAGAGATAIAADLGSRTIREEIDAM 127

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             +G+D +  L+ PR+ A  +   LL  L     I G          +    F       
Sbjct: 128 EVLGIDPINRLVIPRVVASTVVALLLNGLVCVIGIAGGYAFSVFLQGVNPGAFVEGITLL 187

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L  +   ++KA       G+VA   G +V      +G+ V   VV +   + +++++ 
Sbjct: 188 TGLPEVALSMVKAALFGMLAGLVACYRGLSVRGGPKGVGEAVNETVVYAFMALFVVNTIV 247

Query: 365 AIF 367
              
Sbjct: 248 TAV 250


>gi|226365582|ref|YP_002783365.1| YrbE family protein [Rhodococcus opacus B4]
 gi|226244072|dbj|BAH54420.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 269

 Score =  159 bits (402), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 52/242 (21%), Positives = 103/242 (42%)

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
            ++G  I+          + K     L+ Q + +        +L+    G +IA      
Sbjct: 21  ALIGFSIATAVAAVRVVVRRKLAWRELLDQAWRIASVTSAPALLLMIPIGVLIAVTIGSL 80

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
             Q GAE ++  ++  + + +   L+ A+M+AG  GSAI A++GS  I EE++A+  +GL
Sbjct: 81  AGQLGAEGYTGAVVGFVIVGQASALVCALMLAGVGGSAICADLGSRTIREEVEAMEVLGL 140

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
           D +  L+ PR+ A +I    L  +     +    +      +     F +       L++
Sbjct: 141 DVIERLVVPRVLAAVIVGVALCAMVTAVGVSACFLFQVVVQNSSAGSFLAALSQYTRLSD 200

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               L+K+   A    +VA  +G       + +   V   VV +  +V I++++ +  Y 
Sbjct: 201 FVVALVKSMAFAVTSALVASFKGLHAKGGPSGVADAVNEAVVLAFILVFIVNTVLSQLYS 260

Query: 370 AI 371
            +
Sbjct: 261 VL 262


>gi|254819658|ref|ZP_05224659.1| ABC-transporter integral membrane protein [Mycobacterium
           intracellulare ATCC 13950]
          Length = 281

 Score =  159 bits (402), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 102/253 (40%), Gaps = 6/253 (2%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVILISFVT 178
                H+L   +        +  ++ G  L L+  + +      VG     V +++    
Sbjct: 21  IIRLGHLLVFFVRAAVAVPLAVRQYSGEFLRLLSNITWGNGSIVVGGGTAGVAVVLGMTV 80

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA++  +G   L   G    +  + S++  RE+  L+ ++  A + G    A++GSM+I 
Sbjct: 81  GALVGIEGYNFLDLLGLGPATGFVSSLVNTRELAPLMASLAFAMQGGCRFTAQLGSMRIA 140

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+ ++ +  +  L++ R+ A ++++  L         +   +V+          + 
Sbjct: 141 EEIDALESIAIRPIPYLVTTRLIASVVAIIPLYAACLAIGYLSTQVVVGIGSGGSTGSYL 200

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
             F       +I   LIKA         +    G+        +G      +  SI++VI
Sbjct: 201 HYFTLMLAGQDIVYSLIKAVIFVWIASTIQCYYGYYASGGPEGVGVAAGHGMRASITVVI 260

Query: 359 IIDSLFAIFYFAI 371
           I++ L  +  + +
Sbjct: 261 IVNMLLTMALWGV 273


>gi|183980442|ref|YP_001848733.1| integral membrane protein YrbE1B [Mycobacterium marinum M]
 gi|183173768|gb|ACC38878.1| conserved hypothetical integral membrane protein YrbE1B
           [Mycobacterium marinum M]
          Length = 289

 Score =  159 bits (402), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 60/257 (23%), Positives = 116/257 (45%), Gaps = 12/257 (4%)

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
           R+ F  +  N + + G  + + +++S   A     ++++ G+   +   ++  +L LI Q
Sbjct: 8   RARFPRAIANFNRYAG-SVTRGLDESGRLAWF---ILTSLGQSGHALRYYRKEILRLIAQ 63

Query: 160 MYYVGVSGVPVVILISFVTGAV-------IAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           +  +G   + VV   + + G V       IA QG   L   G E F+    +++ +R  G
Sbjct: 64  IG-MGTGAMAVVGGTAAIVGFVTLSGSSLIAIQGFASLGNIGVEAFTGFFSALVNVRIAG 122

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            ++T V +A   G+   AE+G+M+I+EEIDA+  MG+  +  L S RI A ++ +  L  
Sbjct: 123 PVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISYLASTRIMAGLVVIIPLYA 182

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           LA   +     +V    Y      +   F +     ++F   ++A  +A  + +     G
Sbjct: 183 LAMIMSFFSPQMVTTVLYGQSSGTYEHYFRTFLRPDDVFWSFLEAIIIAAIVMVTHCYYG 242

Query: 333 FAVGVHSNSLGKKVTTC 349
           +  G     +G+ V   
Sbjct: 243 YNAGGGPVGVGEAVGRS 259


>gi|118467326|ref|YP_879397.1| ABC transporter transmembrane protein [Mycobacterium avium 104]
 gi|254773147|ref|ZP_05214663.1| ABC-transporter integral membrane protein [Mycobacterium avium
           subsp. avium ATCC 25291]
 gi|118168613|gb|ABK69510.1| ABC-transporter integral membrane protein [Mycobacterium avium 104]
          Length = 285

 Score =  158 bits (401), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 107/253 (42%), Gaps = 6/253 (2%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVILISFVT 178
           +    H+L   +           +++   L L+  + +      VG     V +++ F  
Sbjct: 25  TMRLGHMLVFFVRAVLAVPTVLRQYRTEFLRLLSNIAWGNGSIVVGGGTAGVAVVLGFTA 84

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA++A +G   L+  G    +  + S++  RE+  ++ ++  A ++G    A++G+M+I 
Sbjct: 85  GALVAVEGYNFLNLLGLGPATGIISSLVNTRELAPIMASLAFAMQAGCRFTAQLGAMRIA 144

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+ ++ +  +  L++ R+ A +I++  L I       +   +V           + 
Sbjct: 145 EEIDALESLAIRPIPFLVTTRLMASVIAVIPLYIACLAVTYLTCQVVANIISGGSIGPYL 204

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
             F    +  +I   ++K          V    GF        +G      +  SI++VI
Sbjct: 205 HYFTMMLSAKDIAYSVLKCVVFVWLSSTVQCYYGFYAAGGPEGVGVAAGHAMRASITVVI 264

Query: 359 IIDSLFAIFYFAI 371
           +++ L  +  ++I
Sbjct: 265 MVNMLLTMALWSI 277


>gi|50261859|gb|AAT72482.1| AT1G19800 [Arabidopsis lyrata subsp. lyrata]
          Length = 205

 Score =  158 bits (401), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 44/181 (24%), Positives = 90/181 (49%)

Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198
            G+      K K    + ++Q+   G   + V +L S   G     Q   + ++ G    
Sbjct: 25  AGQVVLRILKGKIHWRNTLQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFTRLGLNRS 84

Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258
              ++++   RE+  ++T++++AGR GSA  AE+G+M+++E+ D +R +G D +  LI+P
Sbjct: 85  IGGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADPIDYLITP 144

Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318
           R+ A  ++LP LT++     +  ++++    Y I   +     H      +I + +IK+ 
Sbjct: 145 RVIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMDSAHRALRPWDIVSAMIKSQ 204

Query: 319 F 319
            
Sbjct: 205 V 205


>gi|222055776|ref|YP_002538138.1| protein of unknown function DUF140 [Geobacter sp. FRC-32]
 gi|221565065|gb|ACM21037.1| protein of unknown function DUF140 [Geobacter sp. FRC-32]
          Length = 257

 Score =  158 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 74/260 (28%), Positives = 135/260 (51%), Gaps = 8/260 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR-QMYYVGVSGV 168
           +   +GK I+K +    +   ++  +I        S  + +  +++++R Q+Y+ G+  +
Sbjct: 1   MITALGKWILKLL---LTGMGLVETIIQAFRNLFLSFKQGRRPIMAVLRKQIYFTGLESL 57

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGA-EIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
            V+++IS   G VI       +S  GA E  +  ++  + +RE+G +LTA++I  RSG+A
Sbjct: 58  KVIVIISVTIGIVI---ITQIISLVGANETLTGRVLVWVIIRELGPVLTAIIIIARSGTA 114

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I  E+G MKIN EI++I ++G+   R LI PRI  +  S+ +LTI    +AI+G  IV  
Sbjct: 115 IATELGYMKINNEIESIESLGIPADRYLIMPRIIGVTTSVVILTIYFEIAAILGGFIVAA 174

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
             + +PF  F     S  T+  +    IK+ F    +     + G  VG  +  + +  T
Sbjct: 175 IGWHVPFDKFAQSIFSILTIKELGMSFIKSLFFGLFLSAACCRHGLGVGKSATQIPQAAT 234

Query: 348 TCVVQSISIVIIIDSLFAIF 367
             V+QS+ +V ++D +  + 
Sbjct: 235 KGVMQSLFLVFVLDGVITLI 254


>gi|120405105|ref|YP_954934.1| hypothetical protein Mvan_4151 [Mycobacterium vanbaalenii PYR-1]
 gi|119957923|gb|ABM14928.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 285

 Score =  158 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 54/251 (21%), Positives = 109/251 (43%), Gaps = 10/251 (3%)

Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY--- 162
            F  L  H+G+ +   ++         G  I   G    ++  F+  ++ LI ++     
Sbjct: 10  RFPRLVDHLGRPV-ALLSRLGDHVLFYGRAI---GGVPHAAVHFRKEIVRLIAEISMGAG 65

Query: 163 ---VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219
              +    V +V  ++   G  +A QG   L   G E  +  L + + +R    ++  + 
Sbjct: 66  TLAMIGGTVVIVGFLTLAAGGTLAIQGYSSLGNIGIEALTGFLAAFINVRIAAPVVAGIG 125

Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279
           +A   G+ + A++G+M+INEEIDA+ +MG+  V  L+S RI A ++++  L  +A   + 
Sbjct: 126 LAATFGAGVTAQLGAMRINEEIDALESMGIRPVEYLVSTRIVAGMVAIAPLYSIAVILSF 185

Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339
           + +       +     ++   F +     ++    ++A  MA AI +V    G+      
Sbjct: 186 VASQFTTVVLFGQSGGLYDHYFDTFLNPIDLLWSFLQAVLMAIAILLVHTYFGYFASGGP 245

Query: 340 NSLGKKVTTCV 350
           + +G  V   V
Sbjct: 246 SGVGAAVGNAV 256


>gi|120401386|ref|YP_951215.1| hypothetical protein Mvan_0361 [Mycobacterium vanbaalenii PYR-1]
 gi|119954204|gb|ABM11209.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 256

 Score =  158 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 106/243 (43%), Gaps = 4/243 (1%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                    + I          + F+ ++L    Q ++V    V   ++++     ++  
Sbjct: 11  LRGVGGFFAMSIDTFVAMVRPPFAFREYVL----QSWFVARVSVLPALMLTLPYSVLLVF 66

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                L +FGA  F+    +I  + +IG ++T ++++G   +A+ A++G+  I EE+DA+
Sbjct: 67  TFNILLKEFGAADFAGTGAAIGTVSQIGPIVTVLVVSGAGATAMCADLGARTIREELDAM 126

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           + MG++ ++ L+ PR+ A       L+     + + GA        ++    F S     
Sbjct: 127 KVMGINPIQALVVPRVLAATTVALALSATVIIAGLAGAFFFCVFVQNVSAGAFISGMTLL 186

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
              A++F  L KA     A G++A  +G +VG     +G  V   VV +  ++  I+ + 
Sbjct: 187 TGAADVFVSLAKATLFGLAAGLIACYKGISVGGGPAGVGNAVNETVVFTFMVLFAINVIA 246

Query: 365 AIF 367
              
Sbjct: 247 TAV 249


>gi|229492731|ref|ZP_04386532.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
 gi|229320390|gb|EEN86210.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
          Length = 257

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 47/243 (19%), Positives = 98/243 (40%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG       +     ++ +  +   + Q + +    +   +L++     +++ 
Sbjct: 8   LAGPMRELGQFYRMGADVAVGLFRTRFQMQEFLEQSWMIARVSIVPTVLVAVPFTVLVSF 67

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                L + GA   S    ++  + ++G ++T +++AG   +AI A++GS  I EEIDA+
Sbjct: 68  TLNILLREIGAADLSGAGAALGAVTQVGPVVTVLIVAGAGATAIAADLGSRTIREEIDAM 127

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             +G+D +  L+ PR+ A  +   LL  L     I G          +    F       
Sbjct: 128 EVLGIDPITRLVIPRVVASTVVALLLNGLVCVIGIAGGYAFSVFLQGVNPGAFVEGITLL 187

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L  +   ++KA       G+VA   G +V      +G+ V   VV +   + +++++ 
Sbjct: 188 TGLPEVALSMVKAALFGMLAGLVACYRGLSVRGGPKGVGEAVNETVVYAFMALFVVNTIV 247

Query: 365 AIF 367
              
Sbjct: 248 TAV 250


>gi|254818556|ref|ZP_05223557.1| ABC-transporter integral membrane protein [Mycobacterium
           intracellulare ATCC 13950]
          Length = 285

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 107/253 (42%), Gaps = 6/253 (2%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVILISFVT 178
           +    H+L   +           +++   L L+  + +      VG     V +++ F  
Sbjct: 25  TMRLGHMLVFFVRAVLAVPIVLRQYRTEFLRLLSNIAWGNGSIVVGGGTAGVAVVLGFTA 84

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA++A +G   L+  G    +  + S++  RE+  ++ ++  A ++G    A++G+M+I 
Sbjct: 85  GALVAVEGYNFLNLLGLGPATGIISSLVNTRELAPIMASLAFAMQAGCRFTAQLGAMRIA 144

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+ ++ +  +  L++ R+ A +I++  L I       +   +V           + 
Sbjct: 145 EEIDALESLAIRPIPFLVTTRLMASVIAVIPLYIACLAVTYLTCQVVANIISGGSIGPYL 204

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
             F    +  +I   ++K          V    GF        +G      +  SI++VI
Sbjct: 205 HYFTMMLSTKDIAYSVLKCVVFVWLSSTVQCYYGFYAAGGPEGVGVAAGHAMRASITVVI 264

Query: 359 IIDSLFAIFYFAI 371
           +++ L  +  ++I
Sbjct: 265 MVNMLLTMALWSI 277


>gi|118469400|ref|YP_885536.1| ABC transporter transmembrane protein [Mycobacterium smegmatis str.
           MC2 155]
 gi|118170687|gb|ABK71583.1| ABC-transporter integral membrane protein [Mycobacterium smegmatis
           str. MC2 155]
          Length = 285

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 48/277 (17%), Positives = 111/277 (40%), Gaps = 9/277 (3%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
           S +  +        G++  K I             ++           ++G  + L+  +
Sbjct: 4   SPYVPTLLAPWVRFGQRASKPIVRLGHMLVFFVRAVAAIPIVLRH---YRGEFVRLLSDI 60

Query: 161 YY------VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
            +      VG     V +++    GA++  +G   L   G    +  + S++  RE+  +
Sbjct: 61  AWGNGSLVVGGGTAGVAVVLGITVGALVGIEGYNFLDLLGLGPATGIISSLVNTRELAPI 120

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
             ++  A ++G    A++GSM+I EEIDA+ ++ +  +  L++ R+ A ++++  L ++ 
Sbjct: 121 AASLAFATQAGCRFTAQLGSMRIAEEIDALDSIAIRPIPYLVTTRLMAAVVAVIPLYVMC 180

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
              + +    V++         +   F    +  +I   L+K          V    GF 
Sbjct: 181 LAVSYLTTQTVVFLISGGSTGSYLHYFTLMLSGQDILYSLLKTIIFVWIASTVQCYYGFY 240

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
                  +G      +  SI++VII++ L  +  +++
Sbjct: 241 ASGGPVGVGVAAGHAMRASITVVIIVNMLLTMALWSV 277


>gi|108801581|ref|YP_641778.1| hypothetical protein Mmcs_4618 [Mycobacterium sp. MCS]
 gi|119870735|ref|YP_940687.1| hypothetical protein Mkms_4706 [Mycobacterium sp. KMS]
 gi|108772000|gb|ABG10722.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
 gi|119696824|gb|ABL93897.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
          Length = 280

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 57/273 (20%), Positives = 115/273 (42%), Gaps = 10/273 (3%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM--- 160
           +++   L    G  +   ++    QA   G  I           +++   + LI +M   
Sbjct: 3   FDATVRLRRAFG-WVPGAVDTMGEQALFYGETIRYIPNAVT---RYRKETIRLIAEMTMG 58

Query: 161 ---YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
                +    V V   ++  +G VIA QG   L   G E  +  L + L +R +  ++  
Sbjct: 59  AGALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAG 118

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           + +A   G+   A++G+M++ EEIDA+ TM +  V  L+S R+ A +I++  L  L+  +
Sbjct: 119 IALAATIGAGTTAQLGAMRVAEEIDAVETMAVHSVSYLVSTRLMAGLIAIVPLYSLSVLA 178

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           A   A             ++   F++    +++    ++A  M+ A+ +V    G+    
Sbjct: 179 AFFAARFTTVYINGQSAGLYDHYFNTFLVPSDLLWSFLQAIVMSIAVMLVHTYYGYNASG 238

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               +G  V   V  S+ +V+ I    ++  + 
Sbjct: 239 GPVGVGIAVGQAVRTSLIVVVTITLFISLAVYG 271


>gi|41406856|ref|NP_959692.1| hypothetical protein MAP0758 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41395206|gb|AAS03075.1| hypothetical protein MAP_0758 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 281

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 101/245 (41%), Gaps = 7/245 (2%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV-----SGVPV 170
           ++ V  +      A   G  ++  G   A++   +  +  +       G        V +
Sbjct: 15  ERPVALLAGIGDHALFYGKALA--GMPFAATRYTREVVRLVAEISMGAGTLAMIGGTVVI 72

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           V  ++   G  +A QG   L   G E  +  L + + +R +  ++  + +A   G+ + A
Sbjct: 73  VGFLTLAAGGTLAIQGYTSLGNIGIEALTGFLAAFINVRIVAPVVAGIGLAATFGAGVTA 132

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           ++G+M+INEE+DA+ +M +  V  L+S RI A ++++  L  +A   + + +        
Sbjct: 133 QLGAMRINEEVDALESMAIRPVAYLVSTRILAGMLAITPLYSIAVILSFVASQFTTTFLL 192

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
                ++   F++     ++    ++A  MA  I ++    G+        +G      V
Sbjct: 193 GQSQGLYQHYFNTFLNPIDLLWSFLQAILMALTILLIHTYYGYFASGGPAGVGNATGNAV 252

Query: 351 VQSIS 355
             S+ 
Sbjct: 253 RTSLI 257


>gi|169631674|ref|YP_001705323.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169243641|emb|CAM64669.1| Putative YrbE family protein [Mycobacterium abscessus]
          Length = 286

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 103/263 (39%), Gaps = 8/263 (3%)

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY-----YVGVSGVP 169
           G++I + I             I++        Y  K F   L    +       G   V 
Sbjct: 18  GQRIAQSIRRLGHMLAFFVEAIASIPNALR--YYSKEFFRLLADVTWGNGSLVTGGGTVG 75

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V  ++    GA+I  +    L+  G    +  + S++  RE+  ++ A+  A ++G    
Sbjct: 76  VAAVLGATIGALIGIEAYNLLNIIGLGPATGFISSLVSTRELAPVMAALAFAMQAGCRFT 135

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS-AIIGASIVIWK 288
           A++G+ +INEEIDA+  + +  +  L++ R+ A  +++  L +L      I    +V   
Sbjct: 136 AQLGAQRINEEIDALDALAIRPIPYLVTTRLLASTVAVVPLYLLCLVISYITCRLLVGIS 195

Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
                   +   F    +  ++   +IKA         +    GF        +G     
Sbjct: 196 SGGSIGGAYNHYFTMMLSGTDVVYSVIKAVVFVWIASTIQCYFGFNASGGPEGVGVAAGH 255

Query: 349 CVVQSISIVIIIDSLFAIFYFAI 371
            +  +I++VII++ L  +  + +
Sbjct: 256 AMRAAITVVIIVNMLLTMALWGV 278


>gi|120405354|ref|YP_955183.1| hypothetical protein Mvan_4401 [Mycobacterium vanbaalenii PYR-1]
 gi|119958172|gb|ABM15177.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 250

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 109/236 (46%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG + + + +      +        +RQ ++V    +   +L++     ++       L+
Sbjct: 9   LGGLFAMSVDTMVLLSRRPFAWQEFLRQSWFVARVSLLPTLLLAIPFSVLLVFTFNILLT 68

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           +FGA  FS    +   + +IG ++T +++AG   +A+ A++G+  I +EIDA+R MG++ 
Sbjct: 69  EFGAADFSGTGAAYGAVTQIGPIVTVLVVAGAGATAMCADLGARTIRDEIDAMRVMGINP 128

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           ++ L+ PR+ A      +L+      +++G+ +      ++    F +       + ++ 
Sbjct: 129 LQALVLPRVLAASFVAVMLSSAVILVSLVGSYVFGVFIQNVTPGAFAAGMTLLTGVGDVV 188

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             LIKA       G++A  +G +VG     +G  V   VV +   +  I+ + +  
Sbjct: 189 VALIKAAMFGLCAGLIACYKGLSVGGGPAGVGLAVNETVVFTFMALFGINIVTSAV 244


>gi|145220617|ref|YP_001131295.1| hypothetical protein Mflv_0011 [Mycobacterium gilvum PYR-GCK]
 gi|145213103|gb|ABP42507.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
          Length = 285

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 105/253 (41%), Gaps = 6/253 (2%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVILISFVT 178
                H+L   +        +   ++   + L+  + +      VG     V I++    
Sbjct: 25  IIRLGHMLVFFVRALLGIPVAISHYRKEFVRLLSDIAWGNGSLVVGGGTAGVAIVLGITV 84

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA++  +G   L   G    +  + S++  RE+  +  ++  A ++G    A++GSM+I 
Sbjct: 85  GALVGIEGYNFLDMLGLGPATGIISSLVNTRELAPIAASLAFATQAGCRFTAQLGSMRIA 144

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+ ++G+  +  L++ R+ A +I++  L ++    + +    V+          + 
Sbjct: 145 EEIDALESLGIRPIPYLVTTRLMASVIAVIPLYVVCLAVSYLTTQAVVMVISGGSTGSYM 204

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
             F    +  +I   ++K          V    GF        +G      +  SI++VI
Sbjct: 205 HYFTLMLSGQDILYSVLKTVIFVWIASTVQCYYGFYASGGPVGVGVAAGHAMRASITVVI 264

Query: 359 IIDSLFAIFYFAI 371
           +++ L  +  +++
Sbjct: 265 MVNMLLTMALWSV 277


>gi|228473179|ref|ZP_04057934.1| conserved hypothetical protein [Capnocytophaga gingivalis ATCC
           33624]
 gi|228275329|gb|EEK14121.1| conserved hypothetical protein [Capnocytophaga gingivalis ATCC
           33624]
          Length = 245

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 51/229 (22%), Positives = 92/229 (40%), Gaps = 2/229 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G       E      K+      +++++  +    + ++  IS   GAVIA Q A 
Sbjct: 4   LEAIGRYFLMLYEIFRKRTKWAMMKRLIMKEIDDLMYGSLGIIAFISLFVGAVIAIQMAL 63

Query: 189 QLSQFGAE-IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +                  + E     T++++AG+ GS I + IG+M++ E+IDA+  M
Sbjct: 64  NIDNPLIPKSLIGFATRQTIVLEFAPTFTSIIVAGKVGSFITSSIGTMRVTEQIDALDIM 123

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++ +  LI P+I AL++  P    +A    I G  I     +    A F          
Sbjct: 124 GVNSLNYLIFPKIIALLL-YPFAITMAMALGIYGGYIAATVGHYATSAEFLEGLKLQFRA 182

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
            +I   LIK+   A  +  +    G+ +   +  +GK  T   V +   
Sbjct: 183 FDITYALIKSVIFAFVLATIPAYHGYYMKGGALDVGKASTISFVWTSVA 231


>gi|226361227|ref|YP_002779005.1| YrbE family protein [Rhodococcus opacus B4]
 gi|226239712|dbj|BAH50060.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 302

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 54/285 (18%), Positives = 120/285 (42%), Gaps = 2/285 (0%)

Query: 84  LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFC 143
            +        +  +           ++   +GK + +    S +     G + +N   + 
Sbjct: 9   AVDAVPAGPAQADRSAPEKRRRPRLSV-AAVGKYLKETPIRSLATLGRSGELAANILRYT 67

Query: 144 AS-SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDL 202
            S +   +  L  +  QM+ +        +L++   GA ++ Q    ++Q GA   +   
Sbjct: 68  VSDTIALRLPLEEVATQMWKLLKVTALPALLMAVPIGAEVSVQVGGIMNQVGANSLAGAA 127

Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
             +  + +   +   ++++G + SAI +++G+  I EEI+AIR MG+D V+ L+ PR  A
Sbjct: 128 SGLGVVGQGAPMAAGLLMSGAAASAIASDLGARAIREEIEAIRVMGIDPVQRLVVPRFIA 187

Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322
           +I   P+L I+   + +    ++     D+    F+  F S AT  ++   ++K+   A 
Sbjct: 188 MIAIAPMLCIVIVAAGVAAGLVISANVNDVVPGSFWQSFGSFATPTDLVFSVLKSVIFAA 247

Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            + ++A   G         +   V   VV S+  + + + + +  
Sbjct: 248 LVVLIASLRGLEAKGGPKGVANAVNASVVLSVFCIFMTNLVVSQI 292


>gi|169631108|ref|YP_001704757.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169243075|emb|CAM64103.1| Putative YrbE family protein [Mycobacterium abscessus]
          Length = 292

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 55/265 (20%), Positives = 113/265 (42%), Gaps = 10/265 (3%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSY----KFKGFLLSLIRQM------YYVGV 165
           + +  F   +   A  LG  I+  G   A+      +++     L+  M        VG 
Sbjct: 19  RSVWNFTKGAGGSAEYLGHQITFVGLVLAAIPQTLKRYRRQTGILLVDMTWGNGSIIVGG 78

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             + V++ +    GA +   G   L   G    +  + + +  RE+  ++ A+  A ++G
Sbjct: 79  GVIGVLVFMGIAVGASVGIVGFSTLDMVGMGSLTGFISAYVNTREMAPMIAAIGFAAQAG 138

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
             + AEIG+M+I+EEIDA+   G+  +  +++ R+ A II +  L +L    A    + +
Sbjct: 139 CRMTAEIGAMRISEEIDALEAQGIRSIPFVVTTRVIAGIIIIVPLYVLTLLLAYGSCAFM 198

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
           ++  ++    V+   F S     ++   +IKA      I  +   +G+  G     +G  
Sbjct: 199 VFFVHNQSQGVYKHYFDSFVHPVDVLYSVIKAVVFVVIIIAIQCYQGYYAGGGPEGVGMA 258

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
               +  S+  V++ D L  + ++ 
Sbjct: 259 SGRAIRASLVAVVLFDMLLTLLFWG 283


>gi|118466445|ref|YP_880208.1| TrnB2 protein [Mycobacterium avium 104]
 gi|118167732|gb|ABK68629.1| TrnB2 protein [Mycobacterium avium 104]
          Length = 281

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 100/245 (40%), Gaps = 7/245 (2%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV-----SGVPV 170
           ++ V  +      A   G  ++  G   A++   +  +  +       G        V +
Sbjct: 15  ERPVALLAGIGDHALFYGKALA--GMPFAATRYTREVVRLVAEISMGAGTLAMIGGTVVI 72

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           V  ++   G  +A QG   L   G E  +  L + + +R    ++  + +A   G+ + A
Sbjct: 73  VGFLTLAAGGTLAIQGYTSLGNIGIEALTGFLAAFINVRIAAPVVAGIGLAATFGAGVTA 132

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           ++G+M+INEE+DA+ +M +  V  L+S RI A ++++  L  +A   + + +        
Sbjct: 133 QLGAMRINEEVDALESMAIRPVAYLVSTRILAGMLAITPLYSIAVILSFVASQFTTTFLL 192

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
                ++   F++     ++    ++A  MA  I ++    G+        +G      V
Sbjct: 193 GQSQGLYQHYFNTFLNPIDLLWSFLQAILMALTILLIHTYYGYFASGGPAGVGNATGNAV 252

Query: 351 VQSIS 355
             S+ 
Sbjct: 253 RTSLI 257


>gi|284042176|ref|YP_003392516.1| hypothetical protein Cwoe_0708 [Conexibacter woesei DSM 14684]
 gi|283946397|gb|ADB49141.1| protein of unknown function DUF140 [Conexibacter woesei DSM 14684]
          Length = 272

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 57/243 (23%), Positives = 116/243 (47%), Gaps = 3/243 (1%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFK-GFLLSLIRQMYYVGVSG-VPVVILISFVTGAVI 182
                  +G ++  TG+   S+ +    +    + Q  +      +P+++ ++ ++ +V 
Sbjct: 17  LRDALEEVGDMLILTGKTLVSAIRPPYPYGDEFVSQFMFALRQCFLPLILTMACISYSVP 76

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
             Q A  L  FGA      L  +  +RE   ++ A+++AG +G+AI A++G+ KI EE+D
Sbjct: 77  GLQAANFLMLFGALDRMGGLFVLAVIREFAPIVCAIVVAGAAGTAITADLGARKIREELD 136

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++ +G+D V+ L+ PR  ALI    L  + A    I G  +      D     FF+ F 
Sbjct: 137 ALQVLGVDPVKNLVVPRFLALIAITALFDVFAIVFGITGG-LAATLLNDARIEPFFATFW 195

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           ++++  +++  L+K         IV   +G  V   +  +G+ V   +V +   + +++ 
Sbjct: 196 TSSSTTDLWGSLLKCTIFGGVTAIVCCYKGMTVSGGAAGVGRAVNQAIVIAFLAIGVVNY 255

Query: 363 LFA 365
           +F 
Sbjct: 256 VFT 258


>gi|254773836|ref|ZP_05215352.1| TrnB2 protein [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 281

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 97/241 (40%), Gaps = 7/241 (2%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV-----SGVPVVILI 174
             +      A   G  ++  G   A++   +  +  +       G        V +V  +
Sbjct: 19  ALLAGIGDHALFYGKALA--GMPFAATRYTREVVRLVAEISMGAGTLAMIGGTVVIVGFL 76

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           +   G  +A QG   L   G E  +  L + + +R    ++  + +A   G+ + A++G+
Sbjct: 77  TLAAGGTLAIQGYTSLGNIGIEALTGFLAAFINVRIAAPVVAGIGLAATFGAGVTAQLGA 136

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           M+INEE+DA+ +M +  V  L+S RI A ++++  L  +A   + + +            
Sbjct: 137 MRINEEVDALESMAIRPVAYLVSTRILAGMLAITPLYSIAVILSFVASQFTTTFLLGQSQ 196

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            ++   F++     ++    ++A  MA  I ++    G+        +G      V  S+
Sbjct: 197 GLYQHYFNTFLNPIDLLWSFLQAILMALTILLIHTYYGYFASGGPAGVGNATGNAVRTSL 256

Query: 355 S 355
            
Sbjct: 257 I 257


>gi|189425024|ref|YP_001952201.1| hypothetical protein Glov_1965 [Geobacter lovleyi SZ]
 gi|189421283|gb|ACD95681.1| protein of unknown function DUF140 [Geobacter lovleyi SZ]
          Length = 270

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 59/258 (22%), Positives = 120/258 (46%), Gaps = 3/258 (1%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
               IG  +++      +   ++   + +       S       + L++Q+Y+ G+    
Sbjct: 9   FPERIGAFVLRRGQFFVTITRLILQSLVSLIS--PPSLGNPAIRMVLLKQLYFTGLEAAK 66

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +++L++ + G VI  Q    L   G       ++  +   E+G LLTA+++  RSG+AI 
Sbjct: 67  IIVLVAVILGTVIVSQV-IGLVGGGNGSLIGKVLVWVVFLELGPLLTAMIVIARSGTAIA 125

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AE+G+MKIN EI A+  +G+D  R L+ PR+     S+ LLTI    ++ +G  +++   
Sbjct: 126 AELGAMKINGEIAALERLGIDPERYLLLPRVIGAATSVMLLTIYFVLTSFVGGFLIVSFG 185

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
           + I +  F     ++  +  +   + KA      I ++    G +VG  +  + +  T  
Sbjct: 186 HHISYDQFIQGIVASLGIREVVVLMAKAAAFGLIIPLICCNAGMSVGTSATEIPQAATRA 245

Query: 350 VVQSISIVIIIDSLFAIF 367
           V+ S+  + ++D +    
Sbjct: 246 VITSLFSIFVLDGVITYL 263


>gi|296394454|ref|YP_003659338.1| hypothetical protein Srot_2051 [Segniliparus rotundus DSM 44985]
 gi|296181601|gb|ADG98507.1| protein of unknown function DUF140 [Segniliparus rotundus DSM
           44985]
          Length = 280

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 52/269 (19%), Positives = 115/269 (42%), Gaps = 3/269 (1%)

Query: 99  QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158
           Q++   +  +    ++   ++  +           L           S   +  L   IR
Sbjct: 5   QQAGRPSIVERFVSYLFDTVLTSLRTLG---RWFMLAADAFRYLVVDSVMLRYPLRETIR 61

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           Q +++        +L+S   G ++  Q      Q GA   +     +  +R+   ++ A+
Sbjct: 62  QCWFITSVTALPSLLVSIPFGVIVMVQVGNITQQVGAASLTGAAGGLAVIRQGAPIVAAL 121

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++ G +GSAI A++G+  I EEIDA+R +G++  + L++PR+ A+++  PLL +   F  
Sbjct: 122 LLGGAAGSAIAADLGARTIREEIDAMRVIGINPTQRLVAPRLAAMLLVAPLLCLFIVFIT 181

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           +    I+   Y D+    +     + A L++++  + KA F    + ++A + G      
Sbjct: 182 MAAGYILAVMYQDVTPGSYLGSLGAFAKLSDVYVAVGKALFFGVVVVVIACQRGLETKFG 241

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
              + + V   VV  +    +++ +    
Sbjct: 242 PRGVAESVNAAVVLGVLSTFVLNVVATQI 270


>gi|315443551|ref|YP_004076430.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|315261854|gb|ADT98595.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 285

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 52/252 (20%), Positives = 107/252 (42%), Gaps = 10/252 (3%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY-- 162
           + F  L  ++G+ +   +          G  ++           F+  ++ LI ++    
Sbjct: 9   SRFPRLVDNLGRPV-AVLGRLGDHVLFYGRAVAGVPHAAVH---FRKEIIRLIAEISMGA 64

Query: 163 ----VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
               +    V +V  ++   G  +A QG   L   G E  +  L + + +R    ++  +
Sbjct: 65  GTLAMIGGTVVIVGFLTLAAGGTLAIQGYSSLGDIGIEALTGFLAAFINVRIAAPVVAGI 124

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
            +A   G+ + A++G+M+INEEIDA+ +MG+  V  L+S RI A ++++  L  +A   +
Sbjct: 125 GLAATFGAGVTAQLGAMRINEEIDALESMGIRPVEYLVSTRIVAGMVAITPLYSIAVILS 184

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
            I +       +     ++   F +     ++    ++A  MA AI +V    G+     
Sbjct: 185 FIASQFTTVVLFGQSGGLYDHYFDTFLNPIDLLWSFLQAVLMAIAILLVHTYFGYFASGG 244

Query: 339 SNSLGKKVTTCV 350
            + +G  V   V
Sbjct: 245 PSGVGAAVGNAV 256


>gi|158520050|ref|YP_001527920.1| hypothetical protein Dole_0033 [Desulfococcus oleovorans Hxd3]
 gi|158508876|gb|ABW65843.1| protein of unknown function DUF140 [Desulfococcus oleovorans Hxd3]
          Length = 258

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 68/258 (26%), Positives = 127/258 (49%), Gaps = 8/258 (3%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLL-SLIRQMYYVGVSGVPVV 171
           +IG+K + +++   + A      I       AS  K +  +   ++ Q+Y+  V  + ++
Sbjct: 7   YIGRKTLAYVDHLQNMAAF---AIDLCAVLLASPLKGRAVVRWGVVEQIYFTAVQALFLI 63

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
           I +S +TG+++  Q     ++F  ++    LM IL +REIG ++TA+++  RS +A+  E
Sbjct: 64  IPLSLLTGSMMLIQ----FAKFSGQVDLGKLMIILVIREIGPVVTAMLVVLRSATAVTIE 119

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           IG M +  EID++   G+D +R+L  PR   +  ++  L I+ +  AI+G   V+     
Sbjct: 120 IGYMNVFNEIDSLEMTGIDPLRLLAIPRFVGITSAIVCLFIVFDLVAILGGYGVVRLTTS 179

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
           IP   F S   S  T A+I  GL+KA      I +V +  GF        + K  +T  +
Sbjct: 180 IPVGNFLSDIGSAITGADIIVGLVKALCFGVVISVVTLYHGFEAQKRITVIPKITSTAAI 239

Query: 352 QSISIVIIIDSLFAIFYF 369
           +     I+ +   +  ++
Sbjct: 240 ECFFYCIVTNIFISGLFY 257


>gi|226306857|ref|YP_002766817.1| YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229492717|ref|ZP_04386518.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
 gi|226185974|dbj|BAH34078.1| putative YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229320376|gb|EEN86196.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
          Length = 290

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 108/263 (41%), Gaps = 15/263 (5%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG--------- 167
           +  + I+D   QA      I++        +  +     ++R +  + +           
Sbjct: 25  RTSRSIDDVGRQAVFFARAIAHI------PWAIRKHPKEVLRLVAEISMGTGALAVIGGT 78

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V VV  ++  +G  IA QG   L   G E  +    + + +R    ++  + ++   G+ 
Sbjct: 79  VAVVGFLTLASGGTIAIQGFSSLGNIGVEALTGFFSAFINVRIAAPVIAGIGLSATIGAG 138

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
             A+IG+M+I+EEIDA+ +M +  V  ++S R+ A +I++  L  LA   + +       
Sbjct: 139 STAQIGAMRISEEIDALESMAISSVPYVVSTRVTAGMIAILPLYSLALVGSFLAGRFTTV 198

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
             +     ++   F +     ++    ++   MA  + ++    G+      + +G  V 
Sbjct: 199 VLFGQSSGLYDHYFTTFLDPVDVAWSFVQVLVMALLVMLIHTYYGYNASGGPSGVGTAVG 258

Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370
             V  S+  V+ +  L ++  + 
Sbjct: 259 RGVRLSLICVVAVTLLVSLALYG 281


>gi|289645181|ref|ZP_06477196.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
 gi|289505006|gb|EFD26089.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
          Length = 286

 Score =  156 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 60/273 (21%), Positives = 118/273 (43%), Gaps = 6/273 (2%)

Query: 99  QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158
            RS      +++   +   + + + D      +LG +++       +  + +G+  S   
Sbjct: 12  HRSGSGTITESVLTRLPPLLQRVVVDVGQCGQLLGRLVTT------AVRQPRGYWGSTRD 65

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           +MY +        +L       +IA      LS  G +        +  +REI    T +
Sbjct: 66  EMYAMLRFCWLPCVLAVGGFTFLIANYAYDLLSLLGGQNRIGTYFVMASIREISPFCTGM 125

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
            +AG  G+A+ A++G+ +I EE+DA++ +G+D  R+L+ PR+ A+ I     TI+     
Sbjct: 126 AVAGVMGTAMAADLGARRIREELDALKVLGVDSTRMLVLPRVLAITIMTVAFTIIGGLLG 185

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           II A      +       +F+ F S+ T   +   ++K+      IG+V  ++G  V   
Sbjct: 186 IIMAMTSATVFGTTSVGGYFANFLSSLTTPELVGVVVKSTLTGTFIGVVCAQKGLTVRGG 245

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           S  +G+ V   VV   + V +I+ +       +
Sbjct: 246 SEGVGRAVNEAVVLCFAAVWVINFVLNATMLGL 278


>gi|296138973|ref|YP_003646216.1| hypothetical protein Tpau_1246 [Tsukamurella paurometabola DSM
           20162]
 gi|296027107|gb|ADG77877.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM
           20162]
          Length = 285

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 56/248 (22%), Positives = 106/248 (42%), Gaps = 2/248 (0%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ-MYYVGVSGVPVVILISFVTG 179
            ++   +    + +++           + +      + Q  Y +GV+  P + LI+   G
Sbjct: 29  VVDSIRTMGRAVRMLVLTLVSMVTDIVRGQLQWKETLYQTWYMIGVTAFPGI-LIAIPFG 87

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            VI+ Q    + Q GA+  S     +  + +   + T +++AG   SAI A++G+  I E
Sbjct: 88  IVISIQVGNIIHQLGADSLSGAAGGLAVIAQGAPIATGLLLAGAGASAIAADLGARTIRE 147

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E DA+R MG++ +  L+ PR+ A  I  PLL +L      I   +V      +    ++ 
Sbjct: 148 ETDAMRVMGINPINRLVVPRLLAAWIVSPLLNLLIIGVGTIAGYLVAVGGQGVTPGAYWL 207

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
            F S A   +++  L+K+      I I+  + G      S  +   V   VV S  ++  
Sbjct: 208 SFGSFAHPIDVWISLVKSIIFGTIIAIIGCQRGLEAKGGSRGVADGVNATVVLSFVVIFA 267

Query: 360 IDSLFAIF 367
           ++ L    
Sbjct: 268 VNLLITQI 275


>gi|319952306|ref|YP_004163573.1| hypothetical protein Celal_0740 [Cellulophaga algicola DSM 14237]
 gi|319420966|gb|ADV48075.1| protein of unknown function DUF140 [Cellulophaga algicola DSM
           14237]
          Length = 245

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 53/246 (21%), Positives = 102/246 (41%), Gaps = 2/246 (0%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            +    +G       E      K++     +++++  +    + ++I ISF  G V+A Q
Sbjct: 1   MNYLASIGSYFIMIREVFKKPTKWRIMKSLILKEIDELIYGSLGIIIFISFFIGGVVAIQ 60

Query: 186 GAFQLSQFGAE-IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            A  ++                 + E     T++++AG+ GS I + IG+M++ E+IDA+
Sbjct: 61  TALNMTNPLIPRNLIGFATRQSVILEFAPTFTSIIMAGKVGSYITSSIGTMRVTEQIDAL 120

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG++ +  L+ P+I AL++  P    +A +  I G  I          A F       
Sbjct: 121 EVMGVNSLNYLVFPKIVALLL-YPFAIAIAMYVGIFGGWIAGVFGGFSTSADFVEGIQLD 179

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               ++    IK    A  I  +    GF +   +  +GK  TT  V +  ++II++ + 
Sbjct: 180 FIPFHVTYSFIKTIIFAFIIATIPSFHGFYMKGGALEVGKASTTSFVWTSVVIIIVNYVL 239

Query: 365 AIFYFA 370
                 
Sbjct: 240 TQLLLG 245


>gi|145223094|ref|YP_001133772.1| hypothetical protein Mflv_2507 [Mycobacterium gilvum PYR-GCK]
 gi|145215580|gb|ABP44984.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
          Length = 285

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 105/248 (42%), Gaps = 10/248 (4%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------ 162
            L  ++G+ +   +          G  ++           F+  ++ LI ++        
Sbjct: 13  RLVGNLGRPV-AVLGRLGDHVLFYGRAVAGVPHAAVH---FRKEIIRLIAEISMGAGTLA 68

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           +    V +V  ++   G  +A QG   L   G E  +  L + + +R    ++  + +A 
Sbjct: 69  MIGGTVVIVGFLTLAAGGTLAIQGYSSLGDIGIEALTGFLAAFINVRIAAPVVAGIGLAA 128

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
             G+ + A++G+M+INEEIDA+ +MG+  V  L+S RI A ++++  L  +A   + I +
Sbjct: 129 TFGAGVTAQLGAMRINEEIDALESMGIRPVEYLVSTRIVAGMVAITPLYSIAVILSFIAS 188

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
                  +     ++   F +     ++    ++A  MA AI +V    G+      + +
Sbjct: 189 QFTTVVLFGQSGGLYDHYFDTFLNPIDLLWSFLQAVLMAIAILLVHTYFGYFASGGPSGV 248

Query: 343 GKKVTTCV 350
           G  V   V
Sbjct: 249 GAAVGNAV 256


>gi|311741975|ref|ZP_07715785.1| ABC superfamily ATP binding cassette transporter membrane protein
           [Aeromicrobium marinum DSM 15272]
 gi|311314468|gb|EFQ84375.1| ABC superfamily ATP binding cassette transporter membrane protein
           [Aeromicrobium marinum DSM 15272]
          Length = 283

 Score =  156 bits (394), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 96/257 (37%), Gaps = 8/257 (3%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ-------MYYVGVSGVPVVILI 174
           I         L            +  K+   +  LI +       M  +G   V VV  +
Sbjct: 21  IRSVGDLGTQLMFYARAIAWIPLTIRKYPKEIRRLIAEVSMGSGAMAAIG-GTVFVVFFL 79

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           S   G  +  +        G    S    +    RE   ++  + +    G+   A++G+
Sbjct: 80  SLAIGIQVGLEAFTTFGNIGVGALSGFFSAYFNTREAAPIMACIALTATVGAGFTAQLGA 139

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           M+++EEIDA+  M +  +  L++ RI A ++++  L  +   +  +   +++   +    
Sbjct: 140 MRVSEEIDALDVMAVPSIPYLVTTRIVAGMVAVVPLFAIGLITMFLATQVMVTVAFGQAT 199

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
             +   F +     ++    +K    A  I  V    G+        +G+ V   V  S+
Sbjct: 200 GTYQHYFDTFLVPGDVALAGVKVLLTAVVIMCVCCYYGYTASGGPAGVGRSVGRAVRTSL 259

Query: 355 SIVIIIDSLFAIFYFAI 371
             V+ ID +F I ++ +
Sbjct: 260 ITVMSIDLVFGIAFWGV 276


>gi|296165591|ref|ZP_06848116.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295899064|gb|EFG78545.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 230

 Score =  156 bits (394), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 92/203 (45%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           + ++ ++    GA++A +    L+  G    S  +     +RE+  L+T V  A ++G  
Sbjct: 19  ISILTILGVTIGAMVAIEAYATLNLIGLGALSGIIGGWGNIREMAPLVTGVAFASQAGCR 78

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + AEIGSM+I +EIDA  +MGL  +  ++  R+   +I +    +L    A   + +VI 
Sbjct: 79  MTAEIGSMRIADEIDATESMGLRSIPFVVGTRLVGGMICVVPGFLLELMVAFFTSDLVIR 138

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
             Y+ P   +   F    +  +I   LIKA     A  ++    G+        +G+   
Sbjct: 139 VSYNQPAGTYNHYFVQFLSPTDIGYSLIKAIIYCAAATLIHCYYGYFASGGPVGVGQASG 198

Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370
             +  S+  ++++D +  +  + 
Sbjct: 199 RAIRASLVTIMVLDIMTTVMIWG 221


>gi|41406661|ref|NP_959497.1| hypothetical protein MAP0563 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41395010|gb|AAS02880.1| hypothetical protein MAP_0563 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 280

 Score =  156 bits (394), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 54/262 (20%), Positives = 116/262 (44%), Gaps = 11/262 (4%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV-------P 169
           ++ + ++D   QA   G  +           +++   + LI +M  +G   +        
Sbjct: 15  RLQEPVDDFGEQALFYGQTMRYVPNALT---RYRKETIRLIAEM-TMGAGALVMIGGTVG 70

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V   ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+   
Sbjct: 71  VAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGAT 130

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A++G+M+++EEIDA+  M +  V  L+S R+ A +I++  L  L+  +A   A       
Sbjct: 131 AQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLIAIVPLYSLSVLAAFFAARFTTVYI 190

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
                 ++   F++    +++    ++A  M+ A+ +V    G+        +G  V   
Sbjct: 191 NGQSKGLYDHYFNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNAHGGPVGVGIAVGQA 250

Query: 350 VVQSISIVIIIDSLFAIFYFAI 371
           V  S+ +V++I    ++  + +
Sbjct: 251 VRTSLIVVVVITLFISLAVYGV 272


>gi|315442435|ref|YP_004075314.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|315260738|gb|ADT97479.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 284

 Score =  156 bits (394), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 48/250 (19%), Positives = 105/250 (42%), Gaps = 6/250 (2%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVILISFVTGAV 181
             H+L   +        +   ++   + L+  + +      VG     V I++    GA+
Sbjct: 27  LGHMLVFFVRALVAIPLALRHYRAEFVRLLSDIAWGNGSLVVGGGTAGVAIVLGITVGAL 86

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +  +G   L   G    +  + S++  RE+  +  ++  A ++G    A++GSM+I EEI
Sbjct: 87  VGIEGYNFLDLLGLGPATGIISSLVNTRELAPIALSLAFATQAGCRFTAQLGSMRIAEEI 146

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+ ++ +  +  L++ R+ A ++++  L ++    + +   IV+          +   F
Sbjct: 147 DALDSIAIRPIPYLVTTRLMASVVAVVPLYVVCLAVSYLTTQIVVRAISGGATGSYMHYF 206

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
               +  +I   L+KA         +    GF        +G      +  SI++VII++
Sbjct: 207 TLMLSGQDILYSLLKAIIFVWIATTIQCYYGFYASGGPEGVGVAAGHAMRASITVVIIVN 266

Query: 362 SLFAIFYFAI 371
            L  +  + I
Sbjct: 267 MLLTMALWNI 276


>gi|183984679|ref|YP_001852970.1| hypothetical protein MMAR_4711 [Mycobacterium marinum M]
 gi|183178005|gb|ACC43115.1| conserved hypothetical membrane protein [Mycobacterium marinum M]
          Length = 281

 Score =  155 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 99/242 (40%), Gaps = 7/242 (2%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV-----SGVPVVIL 173
           V  ++         G  I+  G   A+++  +  +  +       G        + +V  
Sbjct: 18  VGTLSRIGDHTLFYGKAIA--GAPFAATHYRREIIRLVAEISMGAGTLAMIGGTLVIVGF 75

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           ++   G  +A QG   L   G E  +  L + + +R    ++  + +A   G+ + A++G
Sbjct: 76  LTLAAGGTLAVQGYSSLGNIGIEALTGFLAAFINVRIAAPIVAGIGLAATFGAGVTAQLG 135

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           +M+INEEIDA+ +M +  V  L+S RI A ++++  L  +A   + + +       +   
Sbjct: 136 AMRINEEIDALESMAIRPVSYLVSTRIVAGMMAITPLYSIAVILSFLASQFTTVILFGQS 195

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
             ++   F +     ++    ++A  MA  I ++    G+        +G      V  S
Sbjct: 196 GGLYQHYFTTFLNPIDLLWSFLQAVLMAITILLIHTYFGYFASGGPAGVGVATGNAVRTS 255

Query: 354 IS 355
           + 
Sbjct: 256 LI 257


>gi|118618294|ref|YP_906626.1| integral membrane protein YrbE3A [Mycobacterium ulcerans Agy99]
 gi|118570404|gb|ABL05155.1| conserved hypothetical integral membrane protein YrbE3A
           [Mycobacterium ulcerans Agy99]
          Length = 277

 Score =  155 bits (393), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 105/236 (44%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG   + T +   S ++        + Q ++V        +L++     +        L+
Sbjct: 35  LGDFFAMTLDTFVSMFRPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLFNVLLT 94

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
             GA  FS    +I  + +   ++T +++AG   +A+ A++G+  I EE+DA+R MG++ 
Sbjct: 95  DIGAADFSGTGCAIFTVDQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVMGINP 154

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           ++ L+ PR+       P L+ L   + +IGA +       +    + +   +     ++ 
Sbjct: 155 IQALVVPRVLGATTVSPALSSLVIATGLIGAFLCSVFLMHVSAGAWVTGLTTLTHTVDVV 214

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             +IKA       G++A  +G +VG     +G+ V   VV +  ++ +I+ +    
Sbjct: 215 ISMIKATLFGLMAGLIACYKGISVGGGPAGVGRAVNETVVFAFVVLFVINIVVTAV 270


>gi|120405353|ref|YP_955182.1| hypothetical protein Mvan_4400 [Mycobacterium vanbaalenii PYR-1]
 gi|119958171|gb|ABM15176.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 281

 Score =  155 bits (393), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 63/258 (24%), Positives = 114/258 (44%), Gaps = 11/258 (4%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP-------VVI 172
             ++    Q    G  + +TG+       ++  +L  I QM + GV  +        +V 
Sbjct: 19  AGLDRLGLQTLFYGHTLRSTGDAAIH---YRAEILRQIAQMGF-GVGALAAIGGTVVIVS 74

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
            ++   GA++A  G  QLSQ G E  +  + +   +R IG L+  + +A   G+   A++
Sbjct: 75  FLTVSVGALVAVIGFNQLSQVGVEALTGFISAFFNVRLIGPLIAGIALAATIGAGTTAQL 134

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           G+M+INEEIDA+  MG+  V  L S R+ A  + +  L  +A  SA + A +    +Y  
Sbjct: 135 GAMRINEEIDALEVMGVRSVSYLASTRLIAGTLVVVPLYCVALISAFVAAKVGTTVFYGQ 194

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
              V+   F++     ++    + A  MA  I +V    GF        +G+ V   V  
Sbjct: 195 SVGVYEHYFYTFLNPDSVVWSFLLAVTMAVVIMLVHTYYGFNAAGGPAGVGQAVGQSVRA 254

Query: 353 SISIVIIIDSLFAIFYFA 370
           S+    ++    ++  + 
Sbjct: 255 SLVAATVMTMFVSLALYG 272


>gi|254820119|ref|ZP_05225120.1| hypothetical protein MintA_09341 [Mycobacterium intracellulare ATCC
           13950]
          Length = 256

 Score =  155 bits (393), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 53/247 (21%), Positives = 104/247 (42%), Gaps = 4/247 (1%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           F     S      L +    +     +  + FLL    Q ++V    +   +++S     
Sbjct: 8   FAKPVRSVGDFFALALDTLLQIPRRPFAGREFLL----QSWFVARVSIAPTMMLSIPFTV 63

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           +        L +FGA  FS    ++  + +IG L+T +++AG   +A+ A++G+  I EE
Sbjct: 64  LTVFTINILLIEFGAGDFSGSGAALATVTQIGPLVTVLVVAGAGATAMCADLGARTIREE 123

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +DA+R +G++ +  L+ PR+ A      LL+ +   + ++G          +    F + 
Sbjct: 124 LDALRVLGINPIGSLVVPRVLAATFVSLLLSGVVIVTGLVGGFEFSVFVQHVTPGSFAAG 183

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                    +   L+KA        ++A  +G +VG  + ++G  V   VV S   +  I
Sbjct: 184 LTLLTGARELVIALVKAGLFGLTASLIACYKGISVGRGAAAVGNAVNETVVFSFMSLFFI 243

Query: 361 DSLFAIF 367
           D +    
Sbjct: 244 DVVVTAV 250


>gi|120401936|ref|YP_951765.1| hypothetical protein Mvan_0921 [Mycobacterium vanbaalenii PYR-1]
 gi|119954754|gb|ABM11759.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 284

 Score =  155 bits (393), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 58/256 (22%), Positives = 110/256 (42%), Gaps = 9/256 (3%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPV 170
            +    N   +Q    G  + + G+       ++  +   I QM        V    + +
Sbjct: 19  GLAAGWNRIGTQTEFYGRTVRSIGDAVVH---YRTEIAVQIAQMSLGTGALAVVGGTIVI 75

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           V  ++   GA+IA QG   L+  G E  +    + L +R IG L T + +A   G+   A
Sbjct: 76  VGFLTMSAGALIAVQGYNTLAGVGVEALTGFASAYLNVRIIGPLTTGIGLAATIGAGATA 135

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           ++G+M+I EEIDA+  MG+  +  L S R+ A +I +  L  +A   + + A +     Y
Sbjct: 136 QLGAMRIAEEIDALEVMGVRSIAYLASTRLLAGMIVVIPLYCVAVLMSFVAARVGTTAIY 195

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
                V+   F +     ++    ++A  MA  + ++    GF        +G+ V   V
Sbjct: 196 GQSTGVYDHYFTTFLNPLDLVWSFVQAIAMAVTVMVIHTYYGFNASGGPAGVGEAVGRAV 255

Query: 351 VQSISIVIIIDSLFAI 366
             S+ +V+ +  + ++
Sbjct: 256 RASLIVVVFVTLVISL 271


>gi|118619947|ref|YP_908279.1| integral membrane protein YrbE6A [Mycobacterium ulcerans Agy99]
 gi|118572057|gb|ABL06808.1| conserved hypothetical integral membrane protein YrbE6A
           [Mycobacterium ulcerans Agy99]
          Length = 281

 Score =  155 bits (393), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 51/236 (21%), Positives = 105/236 (44%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           ++            +      IRQ  ++  + +   IL++   GA ++ Q A    Q GA
Sbjct: 40  VAALRYLAIDLVTGRFPWTECIRQASFMAATAIMPTILVALPIGATLSIQFAMLAGQVGA 99

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
              +     +  +R+   L+ A+++A   GSAI A++G   + EE DA+  MG+  VR L
Sbjct: 100 TSLAGAASGLTVVRQAASLVAAILLAAAVGSAITADLGVRTMREETDAMEMMGVSVVRNL 159

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PR+ A ++    L  +  F   + + +            F + F + AT  ++   L+
Sbjct: 160 VVPRLLAAMVIGVALCGVVCFVGFLASYLFNVYVQGGSAGSFLATFSAFATTGDMILALL 219

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           KA      + +VA ++G +       +   V   VV+++ +++I++ + +  Y  +
Sbjct: 220 KAAVYGFIVTVVACQKGLSTRGGPAGVANSVNAAVVEAVLLLMIVNVVVSELYTVL 275


>gi|284043171|ref|YP_003393511.1| hypothetical protein Cwoe_1709 [Conexibacter woesei DSM 14684]
 gi|283947392|gb|ADB50136.1| protein of unknown function DUF140 [Conexibacter woesei DSM 14684]
          Length = 264

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 57/248 (22%), Positives = 105/248 (42%), Gaps = 3/248 (1%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFK--GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                  G ++  T       Y  +   F    +RQ   + +S   V+  + F+ G    
Sbjct: 8   RGWVESFGDIVRFTMRMFGEVYGGRVFRFFGEALRQAGLLILSSTLVIWGLVFIIGLQCG 67

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
            +GA+     G   ++    +   LRE+       M+A + G+ IVAEIGSM+I EEIDA
Sbjct: 68  IEGAYFTRGTGTPNYAGVFTAWCDLRELVPYAFGYMMAAKVGTGIVAEIGSMRITEEIDA 127

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI-VIWKYYDIPFAVFFSRFH 302
           +  MG+  +  L   R+ A  + LP + I    +A I + + V+ + +++    +   F 
Sbjct: 128 LEVMGISSMTFLCGTRLLASWMVLPFVYIGGVGAAFIASYLAVVVQIHEVSAGGYELIFW 187

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           +     ++   L+K  FMA  I +V    G+        +G      +V ++  V +I  
Sbjct: 188 AFQNPTDLLYSLLKGAFMATGIVVVGCYYGYNASGGPVGVGTATAKSMVVNLVYVHLIGM 247

Query: 363 LFAIFYFA 370
           +    ++ 
Sbjct: 248 MGTQLFWG 255


>gi|311743966|ref|ZP_07717772.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Aeromicrobium marinum DSM 15272]
 gi|311313096|gb|EFQ83007.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Aeromicrobium marinum DSM 15272]
          Length = 275

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 114/260 (43%), Gaps = 10/260 (3%)

Query: 121 FINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVSG---------VPV 170
            +    S   ++G  ++  G    S     + +   + R +  +             V V
Sbjct: 7   LLERPTSMLALVGTQMTFAGRAIGSIPMTLRHYRAEVFRILLDISWGTGALLVGGGTVGV 66

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           ++L++   G  +  +G   L   G    +  + +++  RE+  L+ A+ +A + G    A
Sbjct: 67  MVLLAVSAGTSLGIEGFNGLETIGLAPLTGFISAVVNTRELAPLVAALALAAQVGCRFTA 126

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           ++GSM+ +EEIDA+  M +  +  L++ R+ A ++++  L ++    + + + + +   +
Sbjct: 127 QLGSMRTSEEIDALSVMAVPAIPYLVTTRLIASMLAILPLYMIGLVGSYLASQLAVTVLF 186

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
             P   +   F +   L +I   ++K    A A+ ++    GF     +  +G+     +
Sbjct: 187 GQPVGTYQHYFGTFIALEDIALSIVKVLVFAFAVTLIHCWYGFMASGGAEGVGEATGRAI 246

Query: 351 VQSISIVIIIDSLFAIFYFA 370
             SI +V++++ +  + ++ 
Sbjct: 247 RASIVVVVLLNMILTLVFWG 266


>gi|239787370|emb|CAX83846.1| ABC transporter permease protein [uncultured bacterium]
          Length = 168

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 61/163 (37%), Positives = 101/163 (61%)

Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
           M++  +RE   L+T +++AGRSGSA+ A +G+M+IN+EIDA+  MG+D VR L++P + A
Sbjct: 1   MALSVVREFAPLITGIVVAGRSGSALAARLGTMRINQEIDALHVMGIDPVRFLVAPALLA 60

Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322
           +++ LPLLT+LA+F A+ GA + I     + F  ++ R      + ++  GL K+   A 
Sbjct: 61  MLVVLPLLTLLADFVALTGAGMYICMDLGMDFPAYWERVIEALKVDDLGHGLGKSVIFAV 120

Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            + +V +  G  V   +  +GK  T  VV +IS +++ D LFA
Sbjct: 121 LVTLVGVVNGSLVQGGAEGVGKATTRSVVHAISAIVVTDMLFA 163


>gi|118463834|ref|YP_879936.1| ABC transporter transmembrane protein [Mycobacterium avium 104]
 gi|254773612|ref|ZP_05215128.1| ABC-transporter integral membrane protein [Mycobacterium avium
           subsp. avium ATCC 25291]
 gi|118165121|gb|ABK66018.1| ABC-transporter integral membrane protein [Mycobacterium avium 104]
          Length = 280

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 54/261 (20%), Positives = 115/261 (44%), Gaps = 11/261 (4%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV-------P 169
           ++ + ++D   QA   G  +           +++   + LI +M  +G   +        
Sbjct: 15  RLQEPVDDFGEQALFYGQTMRYVPNALT---RYRKETIRLIAEM-TMGAGALVMIGGTVG 70

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V   ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+   
Sbjct: 71  VAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGAT 130

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A++G+M+++EEIDA+  M +  V  L+S R+ A +I++  L  L+  +A   A       
Sbjct: 131 AQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLIAIVPLYSLSVLAAFFAARFTTVYI 190

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
                 ++   F++    +++    ++A  M+ A+ +V    G+        +G  V   
Sbjct: 191 NGQSKGLYDHYFNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNAHGGPVGVGIAVGQA 250

Query: 350 VVQSISIVIIIDSLFAIFYFA 370
           V  S+ +V++I    ++  + 
Sbjct: 251 VRTSLIVVVVITLFISLAVYG 271


>gi|118616794|ref|YP_905126.1| integral membrane protein YrbE1B [Mycobacterium ulcerans Agy99]
 gi|118568904|gb|ABL03655.1| conserved hypothetical integral membrane protein YrbE1B
           [Mycobacterium ulcerans Agy99]
          Length = 289

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 60/257 (23%), Positives = 115/257 (44%), Gaps = 12/257 (4%)

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
           R+ F  +  N + + G  + + +++S   A     ++++ G+   +   ++  +L LI Q
Sbjct: 8   RARFPRAIANFNRYAG-SVTRGLDESGRLAWF---ILTSLGQSGHALRYYRKEILRLIAQ 63

Query: 160 MYYVGVSGVPVVILISFVTGAV-------IAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           +  +G   + VV   + + G V       IA QG   L   G E F+    +++ +R  G
Sbjct: 64  IG-MGTGAMAVVGGTAAIVGFVTLSGSSLIAIQGFASLGNIGVEAFTGFFSALVNVRIAG 122

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            ++T V +A   G+   AE+G+M+I+EEIDA+  MG+  +  L S RI A ++ +  L  
Sbjct: 123 PVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIQSISYLASTRIMAGLVVIIPLYA 182

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           LA   +     +V    Y      +   F +     ++F   ++A  +A  + +     G
Sbjct: 183 LAMIMSFFSPQMVTTVLYGQSSGTYEHYFRTFLRPDDVFWSFLEAIIIAAIVMVTHCYYG 242

Query: 333 FAVGVHSNSLGKKVTTC 349
           +  G      G+ V   
Sbjct: 243 YNAGGGPVGEGEAVGRS 259


>gi|118619126|ref|YP_907458.1| integral membrane protein YrbE3B_1 [Mycobacterium ulcerans Agy99]
 gi|183984021|ref|YP_001852312.1| integral membrane protein YrbE3B_1 [Mycobacterium marinum M]
 gi|118571236|gb|ABL05987.1| conserved hypothetical integral membrane protein YrbE3B_1
           [Mycobacterium ulcerans Agy99]
 gi|183177347|gb|ACC42457.1| conserved hypothetical integral membrane protein YrbE3B_1
           [Mycobacterium marinum M]
          Length = 284

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 52/244 (21%), Positives = 100/244 (40%), Gaps = 9/244 (3%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVI 172
           V   N   +Q    G  + +          ++  L+ LI QM        V    V +V 
Sbjct: 21  VAGWNQIGTQTKFFGRTLRSIHYMLIH---YRVELIRLIAQMGLGAGALMVIGGTVAIVG 77

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
            ++  TGA++A QG    S+ G E  +    +   +R I    TA+ ++   G+   A++
Sbjct: 78  FLTVTTGALVAVQGYSDFSELGVEALTGFASAFFNVRLIAPATTAIALSATIGAGATAQL 137

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           G+M+IN+EIDA+  MG+  +  L + R+ A ++ +  L  +   ++   A       Y  
Sbjct: 138 GAMRINDEIDALEVMGIRTIAFLAASRVVAGLLVVIPLYCVGVLASFWAARFGTTVLYSQ 197

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
              V+   F +     ++    ++   ++  I +V    G+        +G+ V   V  
Sbjct: 198 ATGVYDHYFRTFLNPTDLVWSFVQCIALSLVIMLVHTYYGYTARGGPAGVGEAVGRAVRT 257

Query: 353 SISI 356
           S+  
Sbjct: 258 SLIF 261


>gi|118619946|ref|YP_908278.1| integral membrane protein YrbE6B [Mycobacterium ulcerans Agy99]
 gi|118572056|gb|ABL06807.1| conserved hypothetical integral membrane protein YrbE6B
           [Mycobacterium ulcerans Agy99]
          Length = 288

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 103/254 (40%), Gaps = 8/254 (3%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS-------FV 177
                H++   +        +  +++   + L+  + + G   + V              
Sbjct: 28  LARFGHMIAFYLHTVLAIPVALRRYRREFMRLLSDITW-GNGSIVVGGGTVGVVLVLGIT 86

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            GA++A +G   L+  G    +  + S++  RE+  ++ A+  A ++G     +IG+M++
Sbjct: 87  AGALVAIEGYNFLNMMGIGPATGVVSSLVTTRELAPIMAALGFAVQAGCRFTTQIGAMRV 146

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EEIDA+  M +  +  L++ R+ A  +++  L I     + +   +++          +
Sbjct: 147 AEEIDALNAMAIRPIPYLVTTRLLASAVAIIPLYIACLTISYLSCQLMVTFTTHGSVGPY 206

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
              F       ++   +IKA        +V    GF        +G      +  SI++V
Sbjct: 207 LHYFTMLIDARDVGYSVIKAAVFVALASVVQCYYGFCAEGGPEGVGVAAGHAMRASITVV 266

Query: 358 IIIDSLFAIFYFAI 371
           II++ +  +  +++
Sbjct: 267 IIVNMVLTMALWSV 280


>gi|183980209|ref|YP_001848500.1| integral membrane protein YrbE6A [Mycobacterium marinum M]
 gi|183173535|gb|ACC38645.1| conserved hypothetical integral membrane protein YrbE6A
           [Mycobacterium marinum M]
          Length = 281

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 51/236 (21%), Positives = 105/236 (44%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           ++            +      IRQ  ++  + +   IL++   GA ++ Q A    Q GA
Sbjct: 40  VAALRYLAIDLVTGRFPWTECIRQASFMAATAIMPTILVALPIGATLSIQFAMLAGQVGA 99

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
              +     +  +R+   L+ A+++A   GSAI A++G   + EE DA+  MG+  VR L
Sbjct: 100 TSLAGAASGLTVVRQAASLVAAILLAAAVGSAITADLGVRTMREETDAMEVMGVSVVRNL 159

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PR+ A ++    L  +  F   + + +            F + F + AT  ++   L+
Sbjct: 160 VVPRLLAAMVIGVALCGVVCFVGFLASYLFNVYVQGGSAGSFLATFSAFATTGDMILALL 219

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           KA      + +VA ++G +       +   V   VV+++ +++I++ + +  Y  +
Sbjct: 220 KAAVYGFIVTVVACQKGLSTRGGPAGVANSVNAAVVEAVLLLMIVNVVVSELYTVL 275


>gi|118470997|ref|YP_890127.1| TrnB2 protein [Mycobacterium smegmatis str. MC2 155]
 gi|118172284|gb|ABK73180.1| TrnB2 protein [Mycobacterium smegmatis str. MC2 155]
          Length = 287

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 56/282 (19%), Positives = 121/282 (42%), Gaps = 12/282 (4%)

Query: 96  QKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLS 155
           +K ++   Y++       + + + K ++    QA   G  +           +++   + 
Sbjct: 2   RKKEKPMSYDATLRF-RRLFRGVPKTVDTVGEQALFYGETMRYLPNAFT---RYRKETIR 57

Query: 156 LIRQMYYVGVSGV-------PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL 208
           L+ +M  +G   +        V   ++  +G VIA QG   L   G E  +  L + L +
Sbjct: 58  LVAEM-TMGAGALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNV 116

Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268
           R +  ++  + +A   G+   A++G+M++ EEIDA+ +M +  V  L+S R+ A +I++ 
Sbjct: 117 RIVAPVIAGIALAATIGAGATAQLGAMRVAEEIDAVESMAVHAVSYLVSTRLLAGLIAIV 176

Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328
            L  L+  +A   A             ++   F++    +++    ++A  MA A+ +V 
Sbjct: 177 PLYSLSVLAAFFAARFTTVFINGQSAGLYDHYFNTFLIPSDLLWSFLQAIVMAIAVMLVH 236

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
              G+        +G  V   V  S+ +V+ I    ++  + 
Sbjct: 237 TYYGYNASGGPVGVGIAVGQAVRTSLIVVVTITLFISLAVYG 278


>gi|183980210|ref|YP_001848501.1| integral membrane protein YrbE6B [Mycobacterium marinum M]
 gi|183173536|gb|ACC38646.1| conserved hypothetical integral membrane protein YrbE6B
           [Mycobacterium marinum M]
          Length = 288

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 102/254 (40%), Gaps = 8/254 (3%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS-------FV 177
                H++   +        +  +++   + L+  + + G   + V              
Sbjct: 28  LARFGHMIAFYLHTVLAIPVALRRYRREFMRLLSDITW-GNGSIVVGGGTVGVVLVLGIT 86

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            GA++A +G   L+  G       + S++  RE+  ++ A+  A ++G     +IG+M++
Sbjct: 87  AGALVAIEGYNFLNMMGIGPAIGVVSSLVTTRELAPIMAALGFAVQAGCRFTTQIGAMRV 146

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EEIDA+  M +  +  L++ R+ A  +++  L I     + +   +++          +
Sbjct: 147 AEEIDALNAMAIRPIPYLVTTRLLASAVAIIPLYIACLTISYLSCQLMVTFTTHGSVGPY 206

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
              F       ++   +IKA        +V    GF        +G      +  SI++V
Sbjct: 207 LHYFTMLIDARDVGYSVIKAVVFVALASVVQCYYGFCAEGGPEGVGVAAGHAMRASITVV 266

Query: 358 IIIDSLFAIFYFAI 371
           II++ +  +  +++
Sbjct: 267 IIVNMVLTMALWSV 280


>gi|240170398|ref|ZP_04749057.1| hypothetical protein MkanA1_13890 [Mycobacterium kansasii ATCC
           12478]
          Length = 281

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 93/225 (41%), Gaps = 9/225 (4%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---------VPVVILISFVTGAVIAQQ 185
            +        + +    +   ++R +  + +           + +V  ++   G  +A Q
Sbjct: 28  TLFYGKALAGAPFAATHYRREIVRLVAEISMGAGTLAMIGGTLVIVGFLTLAAGGTLAVQ 87

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           G   L   G E  +  L + + +R    ++  + +A   G+ + A++G+M+INEEIDA+ 
Sbjct: 88  GYSSLGNIGIEALTGFLAAFINVRISAPVVAGIGLAATFGAGVTAQLGAMRINEEIDALE 147

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           +M +  +  L+S RI A ++++  L  +A   + + +  V    +     ++   F +  
Sbjct: 148 SMAIRPISYLVSTRIVAGMLAITPLYSIAVILSFLASQFVTVVLFGQSGGLYQHYFTTFL 207

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
              ++    ++A  MA  I ++    G+        +G      V
Sbjct: 208 NPIDLLWSFLQAVLMALTILLIHTYFGYFASGGPAGVGVATGNAV 252


>gi|126436743|ref|YP_001072434.1| hypothetical protein Mjls_4171 [Mycobacterium sp. JLS]
 gi|126236543|gb|ABN99943.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 284

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 60/262 (22%), Positives = 111/262 (42%), Gaps = 16/262 (6%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP-------VV 171
           V   N   +Q    G  I    +       ++  ++ LI QM  +GV  +        +V
Sbjct: 21  VNGWNRIGTQTQFYGETIKGIWDAVVH---YRTEVVRLIAQM-SLGVGALAVIGGTIVIV 76

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
             ++   G++IA Q   QL Q G E  +    + L +R +  L+  + +A   G+   A+
Sbjct: 77  GFLTLSAGSLIAVQAYSQLQQVGVEALAGFTSAFLNVRLVSPLVAGIGLAATIGAGATAQ 136

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           +G+M+I+EE+DA+  MG+  V  L S R+ A +I +  L  +A  +A           Y 
Sbjct: 137 LGAMRISEEVDALEVMGIRSVAYLASSRVLAGVIVVIPLYCIAVLAAFAATRTGTTLVYG 196

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
               V+   F++     ++    ++A  MA  + +V    GF        +G+ V   V 
Sbjct: 197 QSTGVYDHYFYTFLNPTDLIYSFLQAISMAVVVMLVHTYYGFTATGGPAGVGEAVGRAVR 256

Query: 352 QSISIVIIIDSLFAIFYFAIGI 373
            S+       ++F   + ++ I
Sbjct: 257 TSLVA-----AVFVTLFVSLAI 273


>gi|126432720|ref|YP_001068411.1| hypothetical protein Mjls_0107 [Mycobacterium sp. JLS]
 gi|126232520|gb|ABN95920.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 297

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 106/248 (42%), Gaps = 6/248 (2%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVP 169
           K +        S  H+   V++  G    +   ++  +L LI ++        V    V 
Sbjct: 28  KLVAAPSRGLDSVGHVAWFVVTAVGSIGHALRYYRKEVLRLIAEIGMGTGAMAVIGGTVA 87

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +V  ++   G++IA QG   L   G E F+    +++ +R    +++   +A   G+   
Sbjct: 88  IVGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALVNVRIAAPVVSGQALAATVGAGAT 147

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AE+G+M+I+EEIDA+  MG+  +  L+S RI A  I +  L  +A   + + A +    +
Sbjct: 148 AELGAMRISEEIDALEVMGIKSISYLVSTRIMAGFIVIIPLYAMAIIMSFLSAQVTTTLF 207

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
           Y      +   F +     ++    ++A  ++  + +     G+        +G+ V   
Sbjct: 208 YGQSTGTYEHYFRTFLRPDDVAWSFVQAIIISIIVMLNHCYYGYYASGGPVGVGEAVGRS 267

Query: 350 VVQSISIV 357
           +  S+  +
Sbjct: 268 MRASLIAI 275


>gi|296166534|ref|ZP_06848965.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295898146|gb|EFG77721.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 280

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 55/261 (21%), Positives = 117/261 (44%), Gaps = 11/261 (4%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV-------P 169
           ++ + ++D   QA   G  + +         K++   + LI +M  +G   +        
Sbjct: 15  RLQEPVDDFGEQALFYGQTVRHVPHAIT---KYRKETIRLIAEM-TMGAGALVMIGGTVG 70

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V   ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+   
Sbjct: 71  VAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGAT 130

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A++G+M+++EEIDA+  M ++ V  L+S R+ A +I++  L  L+  +A   A       
Sbjct: 131 AQLGAMRVSEEIDAVECMAVESVSYLVSTRLIAGLIAIIPLYSLSVLAAFFAARFTTVYI 190

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
                 ++   F++    +++    ++A  M+ A+ +V    G+        +G  V   
Sbjct: 191 NGQSKGLYDHYFNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGPVGVGIAVGQA 250

Query: 350 VVQSISIVIIIDSLFAIFYFA 370
           V  S+ +V++I    ++  + 
Sbjct: 251 VRTSLIVVVVITLFISLAVYG 271


>gi|254822746|ref|ZP_05227747.1| ABC-transporter integral membrane protein [Mycobacterium
           intracellulare ATCC 13950]
          Length = 280

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 54/267 (20%), Positives = 116/267 (43%), Gaps = 11/267 (4%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV-- 168
              +  ++ + ++D   QA   G  +           +++   + LI +M  +G   +  
Sbjct: 9   FRRLFSRLQEPVDDFGEQALFYGQTVRYVPNALT---RYRKETVRLIAEM-TMGAGALVM 64

Query: 169 -----PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
                 V   ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A  
Sbjct: 65  IGGTVGVAAFLTLASGGVIAVQGYSSLGHIGIEALTGFLSAFLNVRVVAPVIAGIALAAT 124

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
            G+   A++G+M+++EEIDA+  M +  V  L+S R+ A +I++  L  L+  +A   A 
Sbjct: 125 IGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLIAIIPLYSLSVLAAFFAAR 184

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
                       ++   F++    +++    ++A  M+ A+ +V    G+        +G
Sbjct: 185 FTTVYINGQSKGLYDHYFNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGPVGVG 244

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370
             V   V  S+ +V++I    ++  + 
Sbjct: 245 IAVGQAVRTSLIVVVVITLFISLAVYG 271


>gi|206889329|ref|YP_002249685.1| ABC transporter permease protein [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206741267|gb|ACI20324.1| ABC transporter permease protein [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 223

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 54/212 (25%), Positives = 104/212 (49%), Gaps = 1/212 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
            +RQ+Y+ G+  VP V +   + G +I  Q A  ++  G+      ++  L L+EIG   
Sbjct: 8   FLRQIYFTGIQAVPAVTISGLLIGLIIVLQTAS-IAGTGSSNMIGKILLWLVLKEIGPFF 66

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           T ++I  RSGSAI  E+ +MK+  EI+ +  MG+     LI PR++ ++ S  +L+I   
Sbjct: 67  TGLIILTRSGSAIATELATMKLGREIEYLEAMGIKPEVYLIKPRLYGVVCSAVILSIYFQ 126

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
            +A+ G   +      IPF+ + +      ++  I    +K+      I ++ + +G +V
Sbjct: 127 LTAMFGGVFLATLMSGIPFSDYANAIVFHLSIKEIVISFLKSLIFGFLISLICIWQGLSV 186

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
                 + ++ T  V  S+  + +ID +  + 
Sbjct: 187 MKSPTEIPQRATKAVTGSLFSLFLIDVIIDVI 218


>gi|54023081|ref|YP_117323.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54014589|dbj|BAD55959.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 288

 Score =  153 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 58/262 (22%), Positives = 110/262 (41%), Gaps = 9/262 (3%)

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGV 168
           G  +++ I      A  +  V+S      +   +++   +  I  M +      VG   V
Sbjct: 21  GGLVLRGIESFGFVAVFVWQVLSAVPLTLS---RYRAETMRAITNMTWGRGSIVVGGGTV 77

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
           P+++++  V GA +  +    L   G    +  + +    RE+  +  AV  A ++G  I
Sbjct: 78  PMMVVLGLVMGASVGVESFATLDMLGMGPVTGIVSAYATTRELAPIAAAVGFAAQAGCRI 137

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIGSM+I+EEIDAI ++GL  V  +++ R+ A  +++    ++A   A      +I  
Sbjct: 138 TAEIGSMRISEEIDAIESLGLRSVPFVVTTRVIAGALAIVPTFLIALILAYAACRGLITL 197

Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
            +     V+   F    +  ++   +IK       + +V    GF        +G     
Sbjct: 198 LHGQSAGVYDHYFFQFVSGFDVIAAVIKVAVFGTVVILVHSYYGFFAKGGPEGVGIASGR 257

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            V  S   +I ID + +I  + 
Sbjct: 258 AVRTSFVAIIAIDMVLSIVLWG 279


>gi|119867594|ref|YP_937546.1| hypothetical protein Mkms_1546 [Mycobacterium sp. KMS]
 gi|119693683|gb|ABL90756.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
          Length = 284

 Score =  153 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 64/276 (23%), Positives = 112/276 (40%), Gaps = 13/276 (4%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
            S       + +++  +++                G        +K  L  L+ QM  +G
Sbjct: 4   GSPSRFRPRVHRRVAGWVDGLSRIGTQAQFYFQTLGSTKDVVIHYKVELFRLVAQM-SLG 62

Query: 165 VSGVPVVI-------LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           V  + VV         ++  TGA++A QG  Q +  G E  +    +   +R IG ++  
Sbjct: 63  VGALAVVGGTVVIVGFLTLSTGALVAVQGYNQFADVGVEALTGFASAYFNVRLIGPVIAG 122

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           + +A   G+   A++G+M+INEEIDA+  MG+  V  L S R+ A +I +  L  +A  S
Sbjct: 123 IGLAATIGAGATAQLGAMRINEEIDALEVMGVRSVAYLASSRVLAGVIVVIPLYCVAVLS 182

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           A   A       Y     V+   F +     +I     +A  MA  I +V    GF    
Sbjct: 183 AFWAARFGTIAIYGQSSGVYDHYFTTFLNSTDIIWSFFQAIAMAIVIMLVHTYYGFTATG 242

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
               +G+ V   V  S+       ++  + + ++ I
Sbjct: 243 GPAGVGEAVGRAVRTSLIA-----AVLVVLFLSLAI 273


>gi|326331673|ref|ZP_08197961.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
 gi|325950472|gb|EGD42524.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
          Length = 273

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 53/260 (20%), Positives = 109/260 (41%), Gaps = 4/260 (1%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYK----FKGFLLSLIRQMYYVGVSGVPVV 171
           +               +G  I+   E CA + +     +        Q +++    +   
Sbjct: 8   RLATGLWRRFAEGLRTVGETIALGAEACAYAARDIVTGRFDWAQAADQAWFMARVSLLPT 67

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
           IL++   G V + Q     +  GA  FS  +  +  LR+   L+T+++IA   GSAI ++
Sbjct: 68  ILVAIPFGVVTSIQVGAVANSIGASSFSGAVNGVGVLRQAAPLVTSLIIACVVGSAICSD 127

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           +G   I +EI A+  MG + V+ +++PRI A +    +LT +   +AI    ++      
Sbjct: 128 LGMRAIRDEIAALEVMGTNPVQRMVAPRIVAAVFLSVMLTAIVAVAAIATGYVMNVGRGV 187

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
           +    +   F + +  A+++    KA         VA  +G         +   V   VV
Sbjct: 188 VGAGTYLDAFTNFSQSADLWLAEGKAVLFGLIGTTVAAHKGLGATGGPQGVADAVNQTVV 247

Query: 352 QSISIVIIIDSLFAIFYFAI 371
            ++ ++ +++++    Y A+
Sbjct: 248 LNVIVLAVVNAVVTQGYLAL 267


>gi|118471402|ref|YP_884549.1| ABC transporter transmembrane protein [Mycobacterium smegmatis str.
           MC2 155]
 gi|118172689|gb|ABK73585.1| ABC-transporter integral membrane protein [Mycobacterium smegmatis
           str. MC2 155]
          Length = 289

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 54/267 (20%), Positives = 114/267 (42%), Gaps = 16/267 (5%)

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
           RS F  +F      I     +F++     A  +   I +        + F+ +    +R 
Sbjct: 8   RSRFPRAFSR-SSEIAATPARFLDSMGHVAWFVVQAIVHV------PHAFRHYRRESLRL 60

Query: 160 MYYVGVSG---------VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210
           +  +G+           V ++  ++   G++IA QG   L   G E F+    ++  +R 
Sbjct: 61  VAEIGMGTGAMAVIGGTVAIIGFVTLSAGSLIAIQGFASLGNIGVEAFTGFFAALANIRV 120

Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
           +  ++T   +A   G+   AE+G+M+I+EE+DA+  MG+  +  L+S RI A  I +  L
Sbjct: 121 VAPVVTGQALAATVGAGATAELGAMRISEEVDALEVMGIKSISYLVSTRIMAGAIVIIPL 180

Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330
             +A   + + A +V   +Y      +   FH+   + ++    ++   M+  + +    
Sbjct: 181 YAMAILLSFMSAQLVTTIFYSQSVGTYEHYFHTFLRVDDVMWSFLEVIIMSVIVMLNHCY 240

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIV 357
            G+     +  +G+ V   +  S+  +
Sbjct: 241 FGYFASGGAVGVGEAVGRSMRTSLIAI 267


>gi|169631591|ref|YP_001705240.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169243558|emb|CAM64586.1| Putative YrbE family protein [Mycobacterium abscessus]
          Length = 285

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 104/268 (38%), Gaps = 8/268 (2%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
           YN  +      G  +  F         +L           +      G L+        V
Sbjct: 18  YNRIRRPLMRFGHMVAFFFRALSGIPVVLRQYSKEFLRHLSDIAWGNGSLV--------V 69

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G     V +++    GA++A +    L   G    +  + S+   RE+  ++ ++  A +
Sbjct: 70  GGGTAGVALVLGVTAGALVAIESYNFLDLLGLGPATGIISSLASTRELAPIMASLAFAMQ 129

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           +G    A++GSM+I EEIDA+ ++ +  +  L++ R+ A II++  L +     + +   
Sbjct: 130 AGCRFTAQLGSMRIAEEIDAMDSVAIRPIPFLVTTRLMAAIIAVIPLYLACLAISYVSCQ 189

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           +++          +   F    +  +I   +IK          V    GF        +G
Sbjct: 190 VMVGILSGGSVGSYLHYFGIGVSGIDIVYSIIKTVVFVWIASTVQCYYGFYASGGPEGVG 249

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFAI 371
                 +  +I++V++++ L  +  +++
Sbjct: 250 IAAGHAMRAAITVVVMVNMLLTMALWSV 277


>gi|226329328|ref|ZP_03804846.1| hypothetical protein PROPEN_03233 [Proteus penneri ATCC 35198]
 gi|225202514|gb|EEG84868.1| hypothetical protein PROPEN_03233 [Proteus penneri ATCC 35198]
          Length = 180

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 53/176 (30%), Positives = 93/176 (52%), Gaps = 7/176 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             NL   IG +       + +     G              +F+     L++Q+Y VGV 
Sbjct: 1   MINLLSRIGTR-------ALAIFATFGRAGIMLFRALVGKPEFRKQWPLLLKQLYNVGVQ 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++++     G V+  QG   L+ F AE     ++++  LRE+G ++TA++ AGR+GS
Sbjct: 54  SLLIIMVSGLFIGMVLGLQGYLVLTTFSAEASLGMMVALSLLRELGPVVTALLFAGRAGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           A+ AEIG MK  E+I ++  M +D +R +++PR WA +IS+PLL+++      +G 
Sbjct: 114 ALTAEIGLMKATEQISSLEMMAVDPLRRVVAPRFWAGLISMPLLSLIFCCHRYLGW 169


>gi|126436762|ref|YP_001072453.1| hypothetical protein Mjls_4190 [Mycobacterium sp. JLS]
 gi|126236562|gb|ABN99962.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 255

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 104/243 (42%), Gaps = 4/243 (1%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +      L            +  + F+L    Q ++V    +   +++S     +   
Sbjct: 11  VRALGDFFALAADTMMLIPRRPFAGREFIL----QTWFVARVSLVPTLMLSIPFTVLTVF 66

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                L +FGA  FS    ++  + +IG L++ +++AG   +A+ A++GS  I EE+DA+
Sbjct: 67  TLNVLLLEFGAGDFSGSGAALAAVTQIGPLVSVLVVAGAGATAMCADLGSRTIREELDAL 126

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R +G++ V+ L+ PR+ A  +   LL+ +   + ++G         ++    F +     
Sbjct: 127 RVLGINPVQALVVPRVLAATLVSLLLSGVVIVTGLVGGFGFSVFVQNVTPGSFVAGITLL 186

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
                +   L+KA        ++A  +G +VG    ++G  V   VV S   + +ID + 
Sbjct: 187 TGAPELGIALVKAGLFGLTASLLACYKGISVGGGPAAVGNAVNETVVYSFVSLFVIDVIV 246

Query: 365 AIF 367
              
Sbjct: 247 TAV 249


>gi|120404937|ref|YP_954766.1| hypothetical protein Mvan_3983 [Mycobacterium vanbaalenii PYR-1]
 gi|119957755|gb|ABM14760.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 284

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 59/243 (24%), Positives = 102/243 (41%), Gaps = 9/243 (3%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVIL 173
              N   +Q       ++   +       ++  LL LI QM        V    V +V  
Sbjct: 22  AGWNRIGAQMRFYAETLAAVPDAVVH---YRTELLRLIAQMGLGSGALVVVGGTVAIVGF 78

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           ++  TGA++A QG  QL+  G E  +    +   +R I    T+V ++   G+A  A++G
Sbjct: 79  LTMTTGALVAVQGYNQLASVGFEALTGFASAFFNVRLIVPGTTSVALSATIGAAATAQLG 138

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           +M+INEEIDA+  +G+  V  L + R+ A +I +  L  +A   A + A       Y   
Sbjct: 139 AMRINEEIDALEVIGIRSVTYLAATRVLAGVIVVIPLYCVAVMMAFLAARFGTTVIYGQG 198

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
             V+   F +  +  ++     +   M   I +V    GF        +G+ V   V  S
Sbjct: 199 SGVYDHYFGTFLSPTDLIWSFFQCVAMTVVIMLVHTYYGFTASGGPAGVGEAVGRAVRTS 258

Query: 354 ISI 356
           + +
Sbjct: 259 MVV 261


>gi|183982884|ref|YP_001851175.1| integral membrane protein YrbE3A [Mycobacterium marinum M]
 gi|183176210|gb|ACC41320.1| conserved hypothetical integral membrane protein YrbE3A
           [Mycobacterium marinum M]
          Length = 282

 Score =  152 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 105/236 (44%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG   + T +   S ++        + Q ++V        +L++     +        L+
Sbjct: 40  LGDFFAMTLDTFVSMFRPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLFNVLLT 99

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
             GA  FS    +I  + +   ++T +++AG   +A+ A++G+  I EE+DA+R MG++ 
Sbjct: 100 DIGAADFSGTGCAIFTVDQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVMGINP 159

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           ++ L+ PR+ A       L+ L   + +IGA +       +    + +   +     ++ 
Sbjct: 160 IQALVVPRVLAATTVSLALSSLVIATGLIGAFLCSVFLMHVSAGAWVTGLTTLTHTVDVV 219

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             +IKA       G++A  +G +VG     +G+ V   VV +  ++ +I+ +    
Sbjct: 220 ISMIKATLFGLMAGLIACYKGISVGGGPAGVGRAVNETVVFAFVVLFVINIVVTAV 275


>gi|254819936|ref|ZP_05224937.1| TrnB1 protein [Mycobacterium intracellulare ATCC 13950]
          Length = 262

 Score =  152 bits (385), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 52/233 (22%), Positives = 101/233 (43%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G   + T +      +        I Q ++V    +   IL+S    A+        L 
Sbjct: 21  VGSYFALTLDIFTQLVRPPFAWREFIHQAWFVARVSIAPTILLSIPFNALSVFIINVLLV 80

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + GA   S    ++  +  IG + T +++AG   +AI A++G+  I EE+DA+R MG++ 
Sbjct: 81  EIGAADASGAGAALASVAYIGPITTVLVVAGTGATAICADLGARTIREELDAMRVMGINP 140

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V+ L+ PR+ AL ++  LL  +     ++G+      +  +    + +       +A++ 
Sbjct: 141 VQRLLVPRVLALCLNGLLLNSINTIVGLVGSFFFSVYFQHVTPGAWAASLTLLVKIADVA 200

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               KA       G +A  +G  VG     +G  V   VV +   + +I+ + 
Sbjct: 201 IAFFKAALFGLVAGTIACYKGVTVGGGPQGVGNAVNETVVYTFMALFVINVVL 253


>gi|15609102|ref|NP_216481.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis H37Rv]
 gi|15841440|ref|NP_336477.1| hypothetical protein MT2017 [Mycobacterium tuberculosis CDC1551]
 gi|148661774|ref|YP_001283297.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis H37Ra]
 gi|148823179|ref|YP_001287933.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis F11]
 gi|253798987|ref|YP_003031988.1| hypothetical protein TBMG_02025 [Mycobacterium tuberculosis KZN
           1435]
 gi|254232135|ref|ZP_04925462.1| hypothetical integral membrane protein yrbE3B [Mycobacterium
           tuberculosis C]
 gi|254364784|ref|ZP_04980830.1| hypothetical integral membrane protein yrbE3B [Mycobacterium
           tuberculosis str. Haarlem]
 gi|260201058|ref|ZP_05768549.1| hypothetical protein MtubT4_13284 [Mycobacterium tuberculosis T46]
 gi|289443449|ref|ZP_06433193.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           T46]
 gi|289570055|ref|ZP_06450282.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           T17]
 gi|289746096|ref|ZP_06505474.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis
           02_1987]
 gi|289750549|ref|ZP_06509927.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           T92]
 gi|289754062|ref|ZP_06513440.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis
           EAS054]
 gi|289758075|ref|ZP_06517453.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|289762120|ref|ZP_06521498.1| hypothetical integral membrane protein yrbE3B [Mycobacterium
           tuberculosis GM 1503]
 gi|294996887|ref|ZP_06802578.1| hypothetical protein Mtub2_20873 [Mycobacterium tuberculosis 210]
 gi|297634534|ref|ZP_06952314.1| hypothetical protein MtubK4_10446 [Mycobacterium tuberculosis KZN
           4207]
 gi|297731522|ref|ZP_06960640.1| hypothetical protein MtubKR_10551 [Mycobacterium tuberculosis KZN
           R506]
 gi|306776197|ref|ZP_07414534.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu001]
 gi|306779978|ref|ZP_07418315.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu002]
 gi|306784728|ref|ZP_07423050.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu003]
 gi|306789085|ref|ZP_07427407.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu004]
 gi|306793420|ref|ZP_07431722.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu005]
 gi|306797803|ref|ZP_07436105.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu006]
 gi|306803684|ref|ZP_07440352.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu008]
 gi|306808258|ref|ZP_07444926.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu007]
 gi|306968081|ref|ZP_07480742.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu009]
 gi|306972306|ref|ZP_07484967.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu010]
 gi|307080017|ref|ZP_07489187.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu011]
 gi|307084591|ref|ZP_07493704.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu012]
 gi|313658855|ref|ZP_07815735.1| hypothetical protein MtubKV_10561 [Mycobacterium tuberculosis KZN
           V2475]
 gi|2950435|emb|CAA17838.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE3B
           [Mycobacterium tuberculosis H37Rv]
 gi|13881679|gb|AAK46291.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|124601194|gb|EAY60204.1| hypothetical integral membrane protein yrbE3B [Mycobacterium
           tuberculosis C]
 gi|134150298|gb|EBA42343.1| hypothetical integral membrane protein yrbE3B [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148505926|gb|ABQ73735.1| conserved hypothetical integral membrane protein YrbE3b
           [Mycobacterium tuberculosis H37Ra]
 gi|148721706|gb|ABR06331.1| hypothetical integral membrane protein yrbE3B [Mycobacterium
           tuberculosis F11]
 gi|253320490|gb|ACT25093.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           KZN 1435]
 gi|289416368|gb|EFD13608.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           T46]
 gi|289543809|gb|EFD47457.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           T17]
 gi|289686624|gb|EFD54112.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis
           02_1987]
 gi|289691136|gb|EFD58565.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           T92]
 gi|289694649|gb|EFD62078.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis
           EAS054]
 gi|289709626|gb|EFD73642.1| hypothetical integral membrane protein yrbE3B [Mycobacterium
           tuberculosis GM 1503]
 gi|289713639|gb|EFD77651.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|308215377|gb|EFO74776.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu001]
 gi|308327132|gb|EFP15983.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu002]
 gi|308330568|gb|EFP19419.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu003]
 gi|308334402|gb|EFP23253.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu004]
 gi|308338198|gb|EFP27049.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu005]
 gi|308341893|gb|EFP30744.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu006]
 gi|308345382|gb|EFP34233.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu007]
 gi|308349685|gb|EFP38536.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu008]
 gi|308354315|gb|EFP43166.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu009]
 gi|308358257|gb|EFP47108.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu010]
 gi|308362185|gb|EFP51036.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu011]
 gi|308365842|gb|EFP54693.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu012]
 gi|323719530|gb|EGB28656.1| hypothetical protein TMMG_01226 [Mycobacterium tuberculosis
           CDC1551A]
 gi|326903572|gb|EGE50505.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           W-148]
 gi|328458742|gb|AEB04165.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           KZN 4207]
          Length = 271

 Score =  152 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 60/257 (23%), Positives = 107/257 (41%), Gaps = 9/257 (3%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVP 169
           K +V   N   SQ       ++   +       ++G LL +I QM        V    V 
Sbjct: 5   KALVSEWNRMGSQMRFFVGTLAGIPDALMH---YRGELLRVIAQMGLGTGVLAVIGGTVA 61

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +V  ++  TGA++A QG  Q +  G E  +    +    REI      V +A   G+   
Sbjct: 62  IVGFLAMTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTT 121

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A +G+M+INEEIDA+  +G+  +  L S R+ A ++    L  +   +A + A +     
Sbjct: 122 AALGAMRINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAI 181

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
           Y     V+   F++     ++    ++   +A  I +V    G+A       +G+ V   
Sbjct: 182 YGQGSGVYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRA 241

Query: 350 VVQSISIVIIIDSLFAI 366
           V  S+ +  I   +  +
Sbjct: 242 VRASMVVASIAILVMTL 258


>gi|254818327|ref|ZP_05223328.1| hypothetical protein MintA_00285 [Mycobacterium intracellulare ATCC
           13950]
          Length = 261

 Score =  152 bits (384), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 93/225 (41%), Gaps = 9/225 (4%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---------VPVVILISFVTGAVIAQQ 185
            +          +    +   +IR +  + +           + +V  ++   G V+A Q
Sbjct: 8   TLFYARALAGVPFATAHYRREIIRLIAEISMGAGTLAMIGGTLGIVGFMTLAAGGVLAVQ 67

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           G   L   G E  +  L + + +R    ++  + +A   G+ + A++G+M+INEEIDA+ 
Sbjct: 68  GYSSLGNIGIEALTGFLSAFINVRIAAPIVAGIGLAATFGAGVTAQLGAMRINEEIDALE 127

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           +M +  V  L+S RI A ++++  L  +A   + + +  +    +     ++   F +  
Sbjct: 128 SMAIRPVSYLVSTRIVAGMLAVTPLYSIAVILSFVASQFITVFMFGQSSGLYQHYFTTFL 187

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
              ++    ++A  MA  + ++    G+        +G      V
Sbjct: 188 NPIDLLWSFLQAVLMALTVLLIHTYFGYFASGGPAGVGVATGNAV 232


>gi|118467231|ref|YP_881722.1| TrnB1 protein [Mycobacterium avium 104]
 gi|118168518|gb|ABK69415.1| TrnB1 protein [Mycobacterium avium 104]
          Length = 261

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 51/233 (21%), Positives = 100/233 (42%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G   + T +               + Q ++V    +   IL+S    A+        L 
Sbjct: 20  VGSYFALTLDIFVQLVHPPFAWREFVHQAWFVARVSIAPTILLSIPFNALSVFIINVLLV 79

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + GA   S    ++  +  IG + T +++AG   +AI A++G+  I EE+DA+R MG++ 
Sbjct: 80  EIGAADASGAGAALASVAYIGPITTVLVVAGTGATAICADLGARTIREELDAMRVMGINP 139

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V+ L+ PR+ AL ++  LL  +     ++G+      +  +    + +       +A++ 
Sbjct: 140 VQRLLVPRVLALCLNGLLLNSINTIVGLVGSFFFSVYFQHVTPGAWAASLTLLVKIADVA 199

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               KA       G +A  +G  VG     +G  V   VV +   + +I+ + 
Sbjct: 200 IAFFKAALFGLVAGTIACYKGVTVGGGPQGVGNAVNETVVYTFMALFVINVVL 252


>gi|324999479|ref|ZP_08120591.1| hypothetical protein PseP1_11961 [Pseudonocardia sp. P1]
          Length = 274

 Score =  151 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 45/269 (16%), Positives = 103/269 (38%), Gaps = 15/269 (5%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV----- 165
              + +  +  ++D   QA   G  I+       +    K +    +R +  VG+     
Sbjct: 3   LRSVLRAPLALLDDLGKQAEFYGKSIA------WTPKAIKSYKTEQVRLIAEVGMSNGAL 56

Query: 166 ----SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221
                   +   I+   G     Q    LS    E       +I+  R +  ++    +A
Sbjct: 57  AVIGGSSIITFFITMFAGVTGGVQTFDALSDLQLEALGGFTSAIIAPRLLTPIIGGAALA 116

Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281
              GS   A++G+M+++EEIDA+  MG+  +  L++ R+ A +I++  +  +A     IG
Sbjct: 117 ATVGSGFTAQLGAMRVSEEIDALEVMGVRSLPYLVTTRLVAGMITIIPIFAMAMVGGWIG 176

Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341
             +    ++ +    +     +     ++     +   +A  + ++    G+        
Sbjct: 177 WKLTQVNFFGLSAGTYDHYMTTFLQWEDVLYSFAQGLGIAIVVILIHTYYGYTASGGPAG 236

Query: 342 LGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +G  V   V  S+  V+ ++ + A+  + 
Sbjct: 237 VGLAVGKAVRTSLIAVLAVNLVIAMALYG 265


>gi|118465348|ref|YP_881277.1| TrnB2 protein [Mycobacterium avium 104]
 gi|118166635|gb|ABK67532.1| TrnB2 protein [Mycobacterium avium 104]
          Length = 282

 Score =  151 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 64/262 (24%), Positives = 112/262 (42%), Gaps = 9/262 (3%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VG 164
              +G ++V+       Q    G  ++   +      ++ G LL LI +M        V 
Sbjct: 11  FAALGPRLVESTRKLGEQTVFYGQSLTAIADAIR---RYPGELLRLIAEMGMGTGALAVI 67

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
              V ++  ++  TGA++A QG   LS  G E  +  L + L +R I      + +A   
Sbjct: 68  GGTVGIIGFLTLTTGALVAVQGYDTLSNIGVEALTGFLSAFLNVRMIAPCTAGLALAATI 127

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           G+   A++G+M+INEEIDA+  MG+  V  L S RI A I+ +  L  +A   + I A +
Sbjct: 128 GAGATAQLGAMRINEEIDALEVMGIRAVTYLASTRIIAGILVVIPLYAVAVLMSFIAAKL 187

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
           +    Y     V+   F +     ++      A  MA  + +V    GF        +G+
Sbjct: 188 LTIYVYGQSKGVYEHYFSTFLRPNDLLWSFFSALAMATGVMVVHTYYGFTATGGPAGVGE 247

Query: 345 KVTTCVVQSISIVIIIDSLFAI 366
            V   V  S+ +   +  + ++
Sbjct: 248 AVGRSVRSSMIVTAFVCLMISL 269


>gi|118472034|ref|YP_884758.1| hypothetical protein MSMEG_0345 [Mycobacterium smegmatis str. MC2
           155]
 gi|118173321|gb|ABK74217.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
           155]
          Length = 272

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 56/260 (21%), Positives = 109/260 (41%), Gaps = 9/260 (3%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPV 170
           ++    +    Q       I + G+       ++  L+ LI  M        V    V +
Sbjct: 7   RVRAAWDGIGVQTQFYARAIGSIGDAA---MNYRTELIRLIATMGLGAGALAVVGGTVAI 63

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           V  ++  TGA++A QG  Q +  G E  +    +   +R I    TAV ++   G+   A
Sbjct: 64  VGFLTMTTGALVAVQGYNQFASVGVEALTGFASAFFNVRLIAPGTTAVALSATIGAGATA 123

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           ++G+M+INEEIDA+  +G+  V  L S R+ A +I +  L  +A   + I + +     Y
Sbjct: 124 QLGAMRINEEIDALEVIGIRSVSYLASTRVAAGVIVVIPLYCVAVIMSFISSRLGTTVIY 183

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
                V+   F++     ++     ++  +   I +V    G+        +G+ V   V
Sbjct: 184 GQGSGVYDHYFNTFLNTNDLLWSFGQSVAITVVIMLVHTYYGYTASGGPAGVGEAVGRAV 243

Query: 351 VQSISIVIIIDSLFAIFYFA 370
             S+ +  I+  + ++  + 
Sbjct: 244 RTSLIVAAIVVVMISLALYG 263


>gi|254774785|ref|ZP_05216301.1| TrnB2 protein [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 282

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 64/262 (24%), Positives = 112/262 (42%), Gaps = 9/262 (3%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VG 164
              +G ++V+       Q    G  ++   +      ++ G LL LI +M        V 
Sbjct: 11  FAALGPRLVESTRKLGEQTVFYGQSLAAIADAIR---RYPGELLRLIAEMGMGTGALAVI 67

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
              V ++  ++  TGA++A QG   LS  G E  +  L + L +R I      + +A   
Sbjct: 68  GGTVGIIGFLTLTTGALVAVQGYDTLSNIGVEALTGFLSAFLNVRMIAPCTAGLALAATI 127

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           G+   A++G+M+INEEIDA+  MG+  V  L S RI A I+ +  L  +A   + I A +
Sbjct: 128 GAGATAQLGAMRINEEIDALEVMGIRAVTYLASTRIIAGILVVIPLYAVAVLMSFIAAKL 187

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
           +    Y     V+   F +     ++      A  MA  + +V    GF        +G+
Sbjct: 188 LTIYVYGQSKGVYEHYFSTFLRPNDLLWSFFSALAMATGVMVVHTYYGFTATGGPAGVGE 247

Query: 345 KVTTCVVQSISIVIIIDSLFAI 366
            V   V  S+ +   +  + ++
Sbjct: 248 AVGRSVRSSMIVTAFVCLMISL 269


>gi|124514232|gb|EAY55746.1| probable ABC transporter, permease protein [Leptospirillum rubarum]
          Length = 261

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 52/251 (20%), Positives = 114/251 (45%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
             V F         +  ++++   +F       +  L   + Q+ + G+  +P++ ++SF
Sbjct: 6   SAVNFFKIFFYLRDLAQIILTGLYDFFLVLLTRRNALPLFLNQILFNGLDALPILTVVSF 65

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
           + G     +   +L + G +     ++  + LR +G   TA+++  R+ S++  EIG+M+
Sbjct: 66  LVGMGTVAEAGIELPKLGVQNLVGPIILHIILRIVGPFTTALIVTARTASSLTVEIGNMR 125

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           I+ E+D I  MG +    L++PR++  I+S   L++     A IG  ++ +    +P   
Sbjct: 126 ISGELDTIEMMGANISYFLLAPRLFGAIVSTVALSLYFAVIAFIGGLLIAFFGLSMPIVS 185

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
                 ++  L ++   L+++      I  V    G  VG     + ++ T  +V SI +
Sbjct: 186 LIRALETSINLPDLLIPLVESITYGSIIAAVGSYHGLKVGDSPTDVPQQTTRALVSSIVL 245

Query: 357 VIIIDSLFAIF 367
             +  + F +F
Sbjct: 246 CTLFSTFFLVF 256


>gi|206602875|gb|EDZ39356.1| Probable ABC transporter, permease protein [Leptospirillum sp.
           Group II '5-way CG']
          Length = 261

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 51/251 (20%), Positives = 115/251 (45%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
             V F         +  ++++   +F       +  L   + Q+ + G+  +P++ ++SF
Sbjct: 6   SAVNFFKIFFYLRDLAQIILTGLYDFFLVLLTRRNALPLFLNQILFNGLDALPILTVVSF 65

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
           + G     +   +L + G +     ++  + LR +G   TA+++  R+ S++  EIG+M+
Sbjct: 66  LVGMGTVAEAGIELPKLGVQNLVGPIILHIILRIVGPFTTALIVTARTASSLTVEIGNMR 125

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           I+ E+D I  MG +    L++PR++  I+S   L++     A +G  ++ +    +P   
Sbjct: 126 ISGELDTIEMMGANISYFLLAPRLFGAIVSTVALSLYFAVIAFLGGLLIAFFGLSMPIVS 185

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
                 ++  L+++   L+++      I  V    G  VG     + ++ T  +V SI +
Sbjct: 186 LIRALETSINLSDLLIPLVESITYGSIIAAVGSYHGLKVGDSPADVPQQTTRALVSSIVL 245

Query: 357 VIIIDSLFAIF 367
             +  + F +F
Sbjct: 246 CTLFSTFFLVF 256


>gi|169628784|ref|YP_001702433.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169240751|emb|CAM61779.1| Putative YrbE family protein [Mycobacterium abscessus]
          Length = 272

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 102/253 (40%), Gaps = 9/253 (3%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL---------ISFVT 178
            A    +V      F A     + +    +R +  +      +V+          +    
Sbjct: 12  LARFGHMVTFFVHAFLAIPIALRRYRREFLRLLSDITWGNGSIVVGGGTAGVVLVLGVTA 71

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA++A +G   L   G    +  + S++  RE+  ++ A+  A ++G     ++GSM+I 
Sbjct: 72  GALVAIEGYNFLELMGLGPATGVISSLVTTRELAPIMAALAFAVQAGCRFTTQLGSMRIA 131

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE+DA+ ++ +  +  L++ R+ A ++++  L +     + +   I++          + 
Sbjct: 132 EEVDAMDSLAIRPIPYLVTTRLLASVVAIIPLYVACLTISYLSCQIMVGIVSGGSMGPYL 191

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
             F   A+  +I   + KA         V    GF        +G      +  SI+ VI
Sbjct: 192 HYFTLLASGTDIAYSVGKAIIFVWIASAVQCYYGFCADGGPEGVGIAAGHAMRASITAVI 251

Query: 359 IIDSLFAIFYFAI 371
           I++ L  +  +++
Sbjct: 252 IVNMLLTMALWSV 264


>gi|317508278|ref|ZP_07965958.1| hypothetical protein HMPREF9336_02330 [Segniliparus rugosus ATCC
           BAA-974]
 gi|316253453|gb|EFV12843.1| hypothetical protein HMPREF9336_02330 [Segniliparus rugosus ATCC
           BAA-974]
          Length = 290

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 53/255 (20%), Positives = 100/255 (39%), Gaps = 3/255 (1%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLI--RQMYYVGVSGVPVVILIS 175
           + F           GLV+        +   + +  L+ L        VG   + V+ ++ 
Sbjct: 27  LGFFERMGHVLTFFGLVLGAVPHTFRAYGRQIRETLIDLTWGNGRIIVGGGTLSVLAVLG 86

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G VI  +    LS       +  + +    RE G L  A+  A ++G  I AE+G+M
Sbjct: 87  LSIGGVIGLEAYNALSIVNLGPLTGFISAYGMTREFGPLAAALGFAAQAGCRITAEVGAM 146

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           +I EEIDA+   G+  +  +++ R+ A I  +  + +L         S+V+    +    
Sbjct: 147 RIAEEIDALEATGIRSIPFVVTTRVIAGIAVILPVYLLTLILGYEACSLVVNLLNNQSAG 206

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            +   F       ++   LIK       + IV   +G+        +G      +  SI 
Sbjct: 207 TYNYYFMRFLVPQDVVLSLIKTAIFIVVVVIVHGYQGYYASGGPEGVGLASGRAIRSSIV 266

Query: 356 IVIIIDSLFAIFYFA 370
           IV+I++ L  + ++ 
Sbjct: 267 IVVILNMLLTLLFWG 281


>gi|108798493|ref|YP_638690.1| hypothetical protein Mmcs_1523 [Mycobacterium sp. MCS]
 gi|108768912|gb|ABG07634.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
          Length = 272

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 63/265 (23%), Positives = 110/265 (41%), Gaps = 13/265 (4%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI--- 172
           +++  +++                G        +K  L  L+ QM  +GV  + VV    
Sbjct: 3   RRVAGWVDGLSRIGTQAQFYFQTLGSTKDVVIHYKVELFRLVAQM-SLGVGALAVVGGTV 61

Query: 173 ----LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
                ++  TGA++A QG  Q +  G E  +    +   +R IG ++  + +A   G+  
Sbjct: 62  VIVGFLTLSTGALVAVQGYNQFADVGVEALTGFASAYFNVRLIGPVIAGIGLAATIGAGA 121

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            A++G+M+INEEIDA+  MG+  V  L S R+ A +I +  L  +A  SA   A      
Sbjct: 122 TAQLGAMRINEEIDALEVMGVRSVAYLASSRVLAGVIVVIPLYCVAVLSAFWAARFGTIA 181

Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
            Y     V+   F +     +I     +A  MA  I +V    GF        +G+ V  
Sbjct: 182 IYGQSSGVYDHYFTTFLNSTDIIWSFFQAIAMAIVIMLVHTYYGFTATGGPAGVGEAVGR 241

Query: 349 CVVQSISIVIIIDSLFAIFYFAIGI 373
            V  S+       ++  + + ++ I
Sbjct: 242 AVRTSLIA-----AVLVVLFLSLAI 261


>gi|183984956|ref|YP_001853247.1| membrane protein YrbE4B [Mycobacterium marinum M]
 gi|183178282|gb|ACC43392.1| conserved hypothetical membrane protein YrbE4B [Mycobacterium
           marinum M]
          Length = 280

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 55/260 (21%), Positives = 116/260 (44%), Gaps = 9/260 (3%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPV 170
           ++V+ +++   QA   G  +           +++   + L+ +M        +    V V
Sbjct: 15  RLVRPVDNFGEQALFYGETVRYIPNAIT---RYRKETIRLVAEMTLGAGALVMIGGTVGV 71

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
              ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+   A
Sbjct: 72  AAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATA 131

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           ++G+M+++EEIDA+  M +  V  L+S R+ A ++++  L  LA  +A   A        
Sbjct: 132 QLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLAVLAAFFAARFTTVFIN 191

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
                ++   F++    +++    ++A  MA A+ +V    G+     S  +G  V   V
Sbjct: 192 GQSAGLYDHYFNTFLIPSDLLWSFLQAIVMAIAVMLVHTYYGYNASGGSVGVGIAVGQAV 251

Query: 351 VQSISIVIIIDSLFAIFYFA 370
             S+ +V++I    ++  + 
Sbjct: 252 RTSLIVVVVITLFISLAVYG 271


>gi|254822927|ref|ZP_05227928.1| hypothetical protein MintA_23569 [Mycobacterium intracellulare ATCC
           13950]
          Length = 289

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 110/256 (42%), Gaps = 10/256 (3%)

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
           RS F  + +NL+ + G    + ++D    A   G+ +++          ++   L L+ Q
Sbjct: 8   RSRFPRAAENLNRY-GLAAARGLDDIGQMAWFGGVALAHIPHALR---NYRKETLRLVAQ 63

Query: 160 M------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
           +        V    V +V  ++    +++A QG   L   G E F+    +++ +R    
Sbjct: 64  IGMGTGAMAVIGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAAP 123

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           ++T + +A   G+   AE+G+M+I+EEIDA+  MG+  +  L + RI A ++ +  L  L
Sbjct: 124 VVTGIAMAATVGAGATAELGAMRISEEIDALEVMGIKSISFLATTRIMAGLVVIIPLYAL 183

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
           A   + +   I     Y      +   F +     ++F   ++A  +   + I     G+
Sbjct: 184 AMIMSFLSPQITTTVLYGQSNGTYEHYFRTFLRPDDVFWSFLEAILITAVVMITHCFYGY 243

Query: 334 AVGVHSNSLGKKVTTC 349
             G     +G+ V   
Sbjct: 244 NAGGGPVGVGEAVGRS 259


>gi|240170055|ref|ZP_04748714.1| hypothetical integral membrane protein [Mycobacterium kansasii ATCC
           12478]
          Length = 280

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 114/260 (43%), Gaps = 9/260 (3%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVPV 170
           ++ + ++    QA   G  +           +++   + L+ +M        +    V V
Sbjct: 15  RLQEPVDSFGEQALFYGETVRYIPNAIT---RYRKETIRLVAEMTLGAGALVMIGGTVGV 71

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
              ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+   A
Sbjct: 72  AAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATA 131

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           ++G+M+++EEIDA+  M +  V  L+S R+ A ++++  L  L+  +A   A        
Sbjct: 132 QLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARFTTVFIN 191

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
                ++   F++    +++    ++A  M+ A+ +V    G+     S  +G  V   V
Sbjct: 192 GQSKGLYDHYFNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGSVGVGIAVGQAV 251

Query: 351 VQSISIVIIIDSLFAIFYFA 370
             S+ +V++I    ++  + 
Sbjct: 252 RTSLIVVVVITLFISLAVYG 271


>gi|145221307|ref|YP_001131985.1| hypothetical protein Mflv_0712 [Mycobacterium gilvum PYR-GCK]
 gi|315441805|ref|YP_004074684.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|145213793|gb|ABP43197.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
 gi|315260108|gb|ADT96849.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 290

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 51/277 (18%), Positives = 113/277 (40%), Gaps = 6/277 (2%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
           +   + F        K +        S  H+   V++  G    +   ++  +L LI ++
Sbjct: 6   AVLRSRFPRGVARAEKIVGAPGRGLDSIGHVAWFVVTAVGSIGHAVRYYRKEMLRLIAEI 65

Query: 161 ------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
                   V    V +V  ++    +++A QG   L   G E F+    +++ +R    +
Sbjct: 66  GMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAAPV 125

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +    +A   G+   AE+G+M+I+EEIDA+  MG+  +  L+S RI A  + +  L  +A
Sbjct: 126 VAGQALAATVGAGATAELGAMRISEEIDALEVMGIKSISYLVSTRIVAGFVVIIPLYAMA 185

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
              + + A      +Y      +   F +     ++F   ++A  ++  + +     GF 
Sbjct: 186 IIMSFLSAQATTTIFYGQSTGTYEHYFRTFLRPDDVFWSFVQAVIISVIVMLNHCYYGFY 245

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
                  +G+ V   +  S+  ++ +    ++  + +
Sbjct: 246 ASGGPVGVGEAVGRSMRASLVAIVCVVLFASLALYGV 282


>gi|118463838|ref|YP_884136.1| hypothetical protein MAV_5016 [Mycobacterium avium 104]
 gi|254776558|ref|ZP_05218074.1| hypothetical protein MaviaA2_18084 [Mycobacterium avium subsp.
           avium ATCC 25291]
 gi|118165125|gb|ABK66022.1| conserved hypothetical protein [Mycobacterium avium 104]
          Length = 289

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 56/256 (21%), Positives = 111/256 (43%), Gaps = 10/256 (3%)

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
           RS F  + +NL+ + G    + ++D    A   G+ +++     +    ++   L LI Q
Sbjct: 8   RSRFPRAAENLNRY-GLAAARGLDDVGQMAWFGGVALAHIPHALSH---YRKETLRLIAQ 63

Query: 160 M------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
           +        V    V +V  ++    +++A QG   L   G E F+    +++ +R    
Sbjct: 64  IGMGTGAMAVIGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAAP 123

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           ++T + +A   G+   AE+G+M+I+EEIDA+  MG+  +  L + RI A ++ +  L  L
Sbjct: 124 VVTGIAMAATVGAGATAELGAMRISEEIDALEVMGIKSISFLATTRIMAGLVVIIPLYAL 183

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
           A   + +   I     Y      +   F +     ++F   ++A  +   + I     G+
Sbjct: 184 AMIMSFLSPQITTTVLYGQSNGTYEHYFRTFLRPDDVFWSFLEAIIITAVVMITHCFYGY 243

Query: 334 AVGVHSNSLGKKVTTC 349
             G     +G+ V   
Sbjct: 244 NAGGGPVGVGEAVGRS 259


>gi|118619253|ref|YP_907585.1| membrane protein YrbE4B [Mycobacterium ulcerans Agy99]
 gi|118571363|gb|ABL06114.1| conserved hypothetical membrane protein YrbE4B [Mycobacterium
           ulcerans Agy99]
          Length = 280

 Score =  149 bits (376), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 54/260 (20%), Positives = 115/260 (44%), Gaps = 9/260 (3%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPV 170
           ++ + +++   QA   G  +           +++   + L+ +M        +    V V
Sbjct: 15  RLARPVDNLGEQALFYGETVRYIPNATT---RYRKETIRLVAEMTLGAGALVMIGGTVGV 71

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
              ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+   A
Sbjct: 72  AAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATA 131

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           ++G+M+++EEIDA+  M +  V  L+S R+ A ++++  L  LA  +A   A        
Sbjct: 132 QLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLAVLAAFFAARFTTVFIN 191

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
                ++   F++    +++    ++A  MA A+ +V    G+     S  +G  V   V
Sbjct: 192 GQSAGLYDHYFNTFLIPSDLLWSFLQAIVMAIAVMLVHTYYGYNASGGSVGVGIAVGQAV 251

Query: 351 VQSISIVIIIDSLFAIFYFA 370
             S+ +V++I    ++  + 
Sbjct: 252 RTSLIVVVVITLFISLAVYG 271


>gi|54024946|ref|YP_119188.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54016454|dbj|BAD57824.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 295

 Score =  149 bits (376), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 106/262 (40%), Gaps = 10/262 (3%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY-------VGVSGV 168
           ++    + +   Q       ++  G       +++  ++++   + +       VG    
Sbjct: 28  QRAWDPLEELGFQLRFGIAAVAGVGWALR---RYRAQVVAVFTDLAWGNGRAVIVGGGVA 84

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
           PV++++  V GA+I   G   L   G    +  + ++   RE+  L+ AV  A ++G  +
Sbjct: 85  PVLVVMGVVAGAMIGLVGITALDTLGMGPLAGAMSALANPRELAPLIAAVGFAAQAGCRM 144

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG+M+I EEIDA+    +D +  ++S R+ A ++++    ++A     +   + +  
Sbjct: 145 TAEIGAMRIAEEIDALEAQAIDPIPYVVSTRLLAAVLTVVPTYLIALALGFLTTKLTVTA 204

Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
            +      F   F       ++   L+K       +  V   +GF        +G     
Sbjct: 205 VHGEAAGSFEHYFQMFVEPRDLVYSLVKVVIFVVIVTGVHAYQGFYATGGPEGVGVASGR 264

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            +  S+ ++   D +  +  + 
Sbjct: 265 AIRASLVLIATADMVLTVAMWG 286


>gi|83584337|gb|ABC24943.1| plastid permease-like protein [Prototheca wickerhamii]
          Length = 248

 Score =  148 bits (375), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 43/155 (27%), Positives = 81/155 (52%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +   G+      + K    + + Q+  VG   + V +L SF  G V   Q   + ++ G 
Sbjct: 94  LVIAGQSIWRICQGKIHWRNTLEQLNLVGPRSLGVCLLTSFFLGMVFTIQFIREFTRLGL 153

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
                 ++ +   RE+  ++T++++AGR GSA  AE+G+M+++E+ D++R +G D +  L
Sbjct: 154 TRTVGGVLGLALARELTPVVTSIIVAGRVGSAFAAELGTMQVSEQTDSLRVLGSDPIDYL 213

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           I+PRI A +I+ PLL I+        + ++    Y
Sbjct: 214 ITPRILACMIATPLLNIMCLCMGFAASMLLAEAAY 248


>gi|317508277|ref|ZP_07965957.1| hypothetical protein HMPREF9336_02329 [Segniliparus rugosus ATCC
           BAA-974]
 gi|316253452|gb|EFV12842.1| hypothetical protein HMPREF9336_02329 [Segniliparus rugosus ATCC
           BAA-974]
          Length = 280

 Score =  148 bits (375), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 50/269 (18%), Positives = 116/269 (43%), Gaps = 3/269 (1%)

Query: 99  QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158
           Q++   +  + L  ++   ++  +           L           + + +      I 
Sbjct: 5   QKADRTSVVERLVAYLFDTVLTSLRTLG---RWFMLAFGAFRFLVVDTIRLRHPWKETIH 61

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           Q +++        +L+S   G ++  Q      Q GA   +     +  +R+   ++ A+
Sbjct: 62  QCWFITSVTAVPALLVSVPFGIIVMVQVGNLTQQIGAASLTGAAGGLGVIRQGAPIVAAL 121

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++ G +GSAI A++G+  I EEIDA+R +G++  + L++PR+ A++   P+L +   F  
Sbjct: 122 LLGGAAGSAIAADLGARTIREEIDAMRVIGINPTQRLVAPRLAAMLFVSPMLCVFIVFIT 181

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           +    ++   + D+    + + F + A L++I+  + K+ F    + IVA + G      
Sbjct: 182 MTAGYLLAVMFQDVTPGSYLASFGAFAKLSDIYVAIGKSVFFGIVVVIVACQRGLETKFG 241

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
              + + V   VV  +    +++ +    
Sbjct: 242 PRGVAESVNASVVLGVLATFVLNVVVTQI 270


>gi|326330431|ref|ZP_08196739.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1]
 gi|325951706|gb|EGD43738.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1]
          Length = 256

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 52/241 (21%), Positives = 99/241 (41%), Gaps = 1/241 (0%)

Query: 132 LGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190
           +G      G    ++ K  +G+  +   +M+Y+       V L       +IA      +
Sbjct: 8   MGEAGRLLGYLVKTAVKEPRGYWTATRDEMFYMLQFCWLPVTLAVGGFSFLIANYAYDLV 67

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
              GA            LREI    T + +AG  G+A+ A++G+ KI EE+DA   +G+D
Sbjct: 68  GLLGAGNRLGTYFVFASLREISPFATGMAVAGVMGTAMTADLGARKIREELDAFTVLGID 127

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
            +R L+ PR+ A+ + +    I+ +   +  A I            F      + T+  +
Sbjct: 128 AIRTLVLPRVIAITVMMVAFNIVGSLLGMSMAMISATWLGTTSPGAFLGNLLGSMTVPEL 187

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               +K   +   IG+V+ ++G      +  +G+ V   VV S + V + + +       
Sbjct: 188 VGTTVKCTLIGLFIGVVSAQKGLNAKGGAEGVGRAVNEAVVLSFAAVWVANFIVNATMLG 247

Query: 371 I 371
           +
Sbjct: 248 L 248


>gi|302523372|ref|ZP_07275714.1| ABC-transporter integral membrane protein [Streptomyces sp. SPB78]
 gi|318059764|ref|ZP_07978487.1| ABC-transporter integral membrane protein [Streptomyces sp.
           SA3_actG]
 gi|318075808|ref|ZP_07983140.1| ABC-transporter integral membrane protein [Streptomyces sp.
           SA3_actF]
 gi|302432267|gb|EFL04083.1| ABC-transporter integral membrane protein [Streptomyces sp. SPB78]
          Length = 268

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 103/241 (42%), Gaps = 6/241 (2%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVILISFVTGAVIAQQ 185
           L   +        +  ++   +  L+ ++ +      V    V V+I ++  TG V+  Q
Sbjct: 15  LLFYLRALLWIPRTLARYAKEVQRLLAEVVFGSGGLSVIGGTVGVMIGMTAATGTVVGLQ 74

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           G   + Q G    +  + +    RE+  L+  + ++   G+   A++G+M+INEE+DA+ 
Sbjct: 75  GFAAMDQIGTAPLTGFVTAYFNTREVAPLVAGLALSATVGAGFTAQLGAMRINEEVDALE 134

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MG+  +  L++ RI A ++++  L  L   S+ + + +V   +       +   F+   
Sbjct: 135 GMGIRAMPYLVTTRIIAGVVAIIPLYALGLLSSYVASRVVTVVFNGQSSGTYDHYFNLFL 194

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
              ++   ++K    +  + +     GF        +G  V   V  +I ++ + D   +
Sbjct: 195 VPEDVLLSVLKVLVFSVMVILAHCYYGFRAQGGPAGVGVAVGRSVRNAIVLIAVTDFFLS 254

Query: 366 I 366
           +
Sbjct: 255 L 255


>gi|169628783|ref|YP_001702432.1| hypothetical protein MAB_1693 [Mycobacterium abscessus ATCC 19977]
 gi|169240750|emb|CAM61778.1| Conserved hypothetical protein (YrbE family?) [Mycobacterium
           abscessus]
          Length = 289

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 104/236 (44%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +     F A     +      +RQ  ++  + V   +L++   G  ++ Q A    Q GA
Sbjct: 48  VHTLRYFVADLVMGRFQWAEFVRQAAFMAGTAVMPTVLVALPIGVTLSIQFALLAGQVGA 107

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
              +     +  +R+   L+ A+++A   GSA+ A++G   + EE  A+  MG+  VR L
Sbjct: 108 TSLAGAASGLAVVRQAASLVAAMLLASAVGSAMTADLGCRTMREETAAMEVMGVSVVRRL 167

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PR  A I+    LT +  F   + + +            F S F S AT A++   L 
Sbjct: 168 VVPRFAAAIVIGIALTGVVCFVGFLASYLFNVFVQGGAPGSFVSTFASFATPADLLLALF 227

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           KA      + ++A ++G A       +   V   VV+S+ +++I++ + +  Y  +
Sbjct: 228 KAAAYGAIVAVIACQKGLAAHGGPTGVANSVNAAVVESVLLLMIVNVVVSQVYTML 283


>gi|54027027|ref|YP_121269.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54018535|dbj|BAD59905.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 287

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 91/247 (36%), Gaps = 9/247 (3%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVIAQ 184
             I+      A  +  K +   ++R    VG            + VV+++    G  +  
Sbjct: 33  QAITFFQALGAVPFVLKHYRKEVLRLTADVGWGNGSLVVGGGTIGVVVILCAFGGITVGM 92

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           +    L+       +  +      RE+  +L  +  A ++G    A++GSM+I+EEIDA+
Sbjct: 93  ESFNALNLLTMGPLTGAISGFATTRELAPILATLAFAIQAGCRFTAQLGSMRISEEIDAL 152

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            ++ +  +  L+S R+ A  +++  L  +   +A +   + +          +   F   
Sbjct: 153 ESIAIRPLPYLVSTRMIAATLTIVPLYTIGLATAYLATKLSVLFLGGTSAGTYDHYFFQF 212

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               ++F  L+K          +    G+        +G      +   I +++  +   
Sbjct: 213 LIGTDVFFSLLKVVIFVLLATFIQCYYGYVATGGPEGVGVAAGRAIKMVIVVMVFANLFL 272

Query: 365 AIFYFAI 371
            +  + I
Sbjct: 273 TLAIWGI 279


>gi|296167381|ref|ZP_06849783.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295897325|gb|EFG76929.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 289

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 109/256 (42%), Gaps = 10/256 (3%)

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
           R+ F  + +NL+ + G    + ++D    A    + +   G    +   ++   L LI Q
Sbjct: 8   RARFPRAAENLNRY-GGAAGRGLDDVGQMAWFGAVAL---GHIPHALRNYRKETLRLIAQ 63

Query: 160 M------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
           +        V    V +V  ++    +++A QG   L   G E F+    +++ +R    
Sbjct: 64  IGMGTGAMAVIGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAAP 123

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           ++T + +A   G+   AE+G+M+I+EEIDA+  MG+  +  L + RI A ++ +  L  L
Sbjct: 124 VVTGIAMAATVGAGATAELGAMRISEEIDALEVMGIKSISFLATTRIMAGLVVIIPLYAL 183

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
           A   + +   I     Y      +   F +     ++F   ++A  +   + I     G+
Sbjct: 184 AMIMSFLSPQITTTVLYGQSNGTYEHYFRTFLRPDDVFWSFLEAIIITAVVMITHCFYGY 243

Query: 334 AVGVHSNSLGKKVTTC 349
             G     +G+ V   
Sbjct: 244 NAGGGPVGVGEAVGRS 259


>gi|120405065|ref|YP_954894.1| hypothetical protein Mvan_4111 [Mycobacterium vanbaalenii PYR-1]
 gi|119957883|gb|ABM14888.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 281

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 91/225 (40%), Gaps = 9/225 (4%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---------VPVVILISFVTGAVIAQ 184
           + +          Y  + +   ++R +  + +           + +V  ++  TG  +A 
Sbjct: 27  MALFYARAAAGVPYALRFYRRDILRLIAEISMGAGTLAMIGGTLVIVGFLTLATGGTLAV 86

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L   G E  +  L + + +R    ++  + +A   G+ + A++G+M+ NEEIDA+
Sbjct: 87  QGYSSLGDIGIEALTGFLAAFINVRISAPVVAGIGLAATFGAGVTAQLGAMRTNEEIDAL 146

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +  +  L+S R+ A ++++  L  +A   + + +             ++   F + 
Sbjct: 147 EAMAIRPISFLVSTRLIAGMVAITPLYSVAVILSFLASRYTTVVLLGQSAGLYDHYFATF 206

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            +  ++     +A  MA AI ++    G+        +G      
Sbjct: 207 LSPIDLLWSFAQAVLMAVAILLIHTYFGYNATGGPAGVGVATGDA 251


>gi|108797097|ref|YP_637294.1| hypothetical protein Mmcs_0117 [Mycobacterium sp. MCS]
 gi|119866182|ref|YP_936134.1| hypothetical protein Mkms_0126 [Mycobacterium sp. KMS]
 gi|108767516|gb|ABG06238.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
 gi|119692271|gb|ABL89344.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
          Length = 296

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 106/248 (42%), Gaps = 6/248 (2%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVP 169
           K +        S  H+   V++  G    +   ++  +L LI ++        V    V 
Sbjct: 27  KLVAAPSRGLDSVGHVAWFVVTAVGSIGHALRYYRKEVLRLIAEIGMGTGAMAVIGGTVA 86

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +V  ++   G++IA QG   L   G E F+    +++ +R    +++   +A   G+   
Sbjct: 87  IVGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALVNVRIAAPVVSGQALAATVGAGAT 146

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AE+G+M+I+EEIDA+  MG+  +  L+S RI A  I +  L  +A   + + A +    +
Sbjct: 147 AELGAMRISEEIDALEVMGIKSISYLVSTRIMAGFIVIIPLYAMAIIMSFLSAQVTTTLF 206

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
           Y      +   F +     ++    ++A  ++  + I     G+        +G+ V   
Sbjct: 207 YGQSTGTYEHYFRTFLRPDDVAWSFVQAIIISIIVMINHCYYGYYASGGPVGVGEAVGRS 266

Query: 350 VVQSISIV 357
           +  S+  +
Sbjct: 267 MRASLIAI 274


>gi|120406151|ref|YP_955980.1| hypothetical protein Mvan_5203 [Mycobacterium vanbaalenii PYR-1]
 gi|119958969|gb|ABM15974.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 280

 Score =  146 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 53/266 (19%), Positives = 111/266 (41%), Gaps = 9/266 (3%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VG 164
              + +   + ++    QA   G              +++   + LI +M        + 
Sbjct: 9   FRRLLRFFPRAVDTVGEQALFYGETFRYVPNALT---RYRKETIRLIAEMSMGTGALVMI 65

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
              V V   ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   
Sbjct: 66  GGTVGVAAFMTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAGIALAATI 125

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           G+   A++G+M++ EEIDA+ +M +  V  L+S R+ A +I++  L  L+  +A   A  
Sbjct: 126 GAGATAQLGAMRVAEEIDAVESMAVHAVSYLVSTRLIAGLIAIVPLYALSVLAAFFAARF 185

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
                      ++   F++    +++    ++A  M+ A+ +V    G+        +G 
Sbjct: 186 TTVYINGQSAGLYDHYFNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGPVGVGI 245

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370
            V   V  S+ +V+ I    ++  + 
Sbjct: 246 AVGQAVRTSLIVVVTIVLFISLAVYG 271


>gi|167970513|ref|ZP_02552790.1| hypothetical integral membrane protein yrbE3B [Mycobacterium
           tuberculosis H37Ra]
 gi|215404241|ref|ZP_03416422.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis
           02_1987]
 gi|215411647|ref|ZP_03420443.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis
           94_M4241A]
 gi|215427324|ref|ZP_03425243.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis T92]
 gi|215430875|ref|ZP_03428794.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis
           EAS054]
 gi|215446168|ref|ZP_03432920.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis T85]
 gi|218753677|ref|ZP_03532473.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis GM
           1503]
 gi|219557919|ref|ZP_03536995.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis T17]
 gi|254550985|ref|ZP_05141432.1| hypothetical protein Mtube_11071 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|289447582|ref|ZP_06437326.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           CPHL_A]
 gi|298525459|ref|ZP_07012868.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|289420540|gb|EFD17741.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           CPHL_A]
 gi|298495253|gb|EFI30547.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
          Length = 258

 Score =  146 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 55/239 (23%), Positives = 100/239 (41%), Gaps = 6/239 (2%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVILISFVTGAVIAQQGA 187
             +        +   ++G LL +I QM        V    V +V  ++  TGA++A QG 
Sbjct: 7   FFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTGAIVAVQGY 66

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            Q +  G E  +    +    REI      V +A   G+   A +G+M+INEEIDA+  +
Sbjct: 67  NQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINEEIDALEVI 126

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+  +  L S R+ A ++    L  +   +A + A +     Y     V+   F++    
Sbjct: 127 GIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGVYDHYFNTFLRP 186

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
            ++    ++   +A  I +V    G+A       +G+ V   V  S+ +  I   +  +
Sbjct: 187 TDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASIAILVMTL 245


>gi|145222688|ref|YP_001133366.1| hypothetical protein Mflv_2100 [Mycobacterium gilvum PYR-GCK]
 gi|315443152|ref|YP_004076031.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|145215174|gb|ABP44578.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
 gi|315261455|gb|ADT98196.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 284

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 57/250 (22%), Positives = 102/250 (40%), Gaps = 15/250 (6%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG-------- 167
           + I    N    Q    G  + +             + + L+RQ+  +G+          
Sbjct: 18  RSIADPWNQVGVQTKFYGRTLRSIVIAVTR------YRIELVRQIAQMGLGAGALIVIGG 71

Query: 168 -VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            V +V  ++  TGA++A QG    S+ G E  +    +   +R I    TAV +A   G+
Sbjct: 72  TVAIVGFLTVTTGALVAVQGYTDFSEIGVEALTGFASAFFNVRLIAPATTAVALAATIGA 131

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
              A++G+M+INEEIDA+  MG+  V  L S R+ A ++ +  L  +   ++   A    
Sbjct: 132 GATAQLGAMRINEEIDALEVMGIRSVAYLASTRVLAGLLVVIPLYCVGVLASFWAARFGT 191

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
              Y     V+   F +     ++     +   +A  I +V    GF+       +G+ V
Sbjct: 192 TVIYGQSTGVYDHYFRTFLNPTDLVWSFAQCIVLAIVIMLVHTYYGFSARGGPAGVGEAV 251

Query: 347 TTCVVQSISI 356
              V  S+ +
Sbjct: 252 GRAVRTSLIL 261


>gi|260186936|ref|ZP_05764410.1| hypothetical protein MtubCP_13018 [Mycobacterium tuberculosis
           CPHL_A]
          Length = 254

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 55/239 (23%), Positives = 100/239 (41%), Gaps = 6/239 (2%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVILISFVTGAVIAQQGA 187
             +        +   ++G LL +I QM        V    V +V  ++  TGA++A QG 
Sbjct: 3   FFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTGAIVAVQGY 62

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            Q +  G E  +    +    REI      V +A   G+   A +G+M+INEEIDA+  +
Sbjct: 63  NQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINEEIDALEVI 122

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+  +  L S R+ A ++    L  +   +A + A +     Y     V+   F++    
Sbjct: 123 GIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGVYDHYFNTFLRP 182

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
            ++    ++   +A  I +V    G+A       +G+ V   V  S+ +  I   +  +
Sbjct: 183 TDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASIAILVMTL 241


>gi|226304400|ref|YP_002764358.1| YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229494174|ref|ZP_04387937.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
 gi|226183515|dbj|BAH31619.1| putative YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229318536|gb|EEN84394.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
          Length = 285

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 109/266 (40%), Gaps = 10/266 (3%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYV---------GV 165
           ++  + +  +      LG  ++      AS  +    +   ++ Q+  V         G 
Sbjct: 11  RQASRPLRTAGDGLVSLGQHVTFYVRTIASIPFALTKYRKHVLGQISEVSFGTNSLLSGG 70

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             + +V  +S     ++  +    L   G    S  L ++   RE+  ++ A+ +A + G
Sbjct: 71  GTIGIVFAMSLAAAMMLGVETHRGLELVGMTSLSGMLSAVANTRELAPVVVAIALAAKVG 130

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           +   A+IG+M+I++EIDA+ +M +  +  L   R+ A +I +  + ++   ++ +   +V
Sbjct: 131 TGFTAQIGAMRISDEIDALDSMAIRSIPFLAGTRVIAAMICVIPIYMIGLLASYLSTRLV 190

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
           +  +       +   FH   +  ++    +KA   A  + +V    G+        +G+ 
Sbjct: 191 VVFFNGASAGTYDYFFHLAISPQDLLYSGLKAVVFAAVVALVHCAYGYYASGGPAGVGQA 250

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAI 371
               +  +I  + I+D L     + +
Sbjct: 251 AGRALRTAILAIGILDVLMTFALWGL 276


>gi|289554258|ref|ZP_06443468.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           KZN 605]
 gi|289438890|gb|EFD21383.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           KZN 605]
          Length = 247

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 6/225 (2%)

Query: 148 KFKGFLLSLIRQMYY------VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSID 201
            ++G LL +I QM        V    V +V  ++  TGA++A QG  Q +  G E  +  
Sbjct: 10  HYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTGAIVAVQGYNQFASVGVEALTGF 69

Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261
             +    REI      V +A   G+   A +G+M+INEEIDA+  +G+  +  L S R+ 
Sbjct: 70  ASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINEEIDALEVIGIRSISYLASTRVL 129

Query: 262 ALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMA 321
           A ++    L  +   +A + A +     Y     V+   F++     ++    ++   +A
Sbjct: 130 AGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGVYDHYFNTFLRPTDVLWSSVEVVVVA 189

Query: 322 CAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
             I +V    G+A       +G+ V   V  S+ +  I   +  +
Sbjct: 190 LMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASIAILVMTL 234


>gi|145222147|ref|YP_001132825.1| hypothetical protein Mflv_1555 [Mycobacterium gilvum PYR-GCK]
 gi|315442586|ref|YP_004075465.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|145214633|gb|ABP44037.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
 gi|315260889|gb|ADT97630.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 280

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 53/257 (20%), Positives = 109/257 (42%), Gaps = 9/257 (3%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVIL 173
           + ++    QA   G              +++   + LI +M        +    V V   
Sbjct: 18  RAVDTVGEQALFYGETFRYVPNAIT---RYRKETIRLIAEMSMGTGALVMIGGTVGVAAF 74

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+   A++G
Sbjct: 75  MTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAGIALAATIGAGATAQLG 134

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           +M++ EEIDA+  M +  V  L+S R+ A +I++  L  L+  +A   A           
Sbjct: 135 AMRVAEEIDAVEAMAVHAVSYLVSTRLIAGLIAIVPLYALSVLAAFFAARFTTVYINGQS 194

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
             ++   F++    +++    ++A  M+ A+ +V    G+        +G  V   V  S
Sbjct: 195 AGLYDHYFNTFLVPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGPVGVGIAVGQAVRTS 254

Query: 354 ISIVIIIDSLFAIFYFA 370
           + +V+ I  + ++  + 
Sbjct: 255 LIVVVTIVLMISLAVYG 271


>gi|183982885|ref|YP_001851176.1| integral membrane protein, YrbE3B [Mycobacterium marinum M]
 gi|183176211|gb|ACC41321.1| conserved hypothetical integral membrane protein, YrbE3B
           [Mycobacterium marinum M]
          Length = 284

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 59/257 (22%), Positives = 106/257 (41%), Gaps = 9/257 (3%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVP 169
           K +V+  N   SQ       ++   +       ++  LL +I QM +      V    V 
Sbjct: 18  KSLVREWNRLGSQMRFYVTTLTGIPDAVMH---YRSELLRVIAQMGFGAGTLAVIGGTVV 74

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +V  ++  TGA++A QG  Q +  G E  +    +    REI      V +A   G+   
Sbjct: 75  IVGFLAMTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGAT 134

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A++G+M+INEEIDA+  +G+  V  L S R+ A ++    L  +   +A + A       
Sbjct: 135 AQLGAMRINEEIDALEVIGIRSVSYLASTRVLAGVVVAIPLFCVGLITAYLAARAGTTAI 194

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
           Y     V+   F++     ++     +   +A  I +V    G+        +G+ V   
Sbjct: 195 YGQGSGVYDHYFNTFLRPTDVLWSSFEVVVVALMIMLVCTYYGYNAHGGPAGVGEAVGRA 254

Query: 350 VVQSISIVIIIDSLFAI 366
           V  S+ +  I   +  +
Sbjct: 255 VRASMVVASIAIVIMTL 271


>gi|15828392|ref|NP_302655.1| hypothetical protein ML2588 [Mycobacterium leprae TN]
 gi|221230869|ref|YP_002504285.1| hypothetical protein MLBr_02588 [Mycobacterium leprae Br4923]
 gi|13093822|emb|CAC32120.1| conserved membrane protein [Mycobacterium leprae]
 gi|219933976|emb|CAR72688.1| conserved membrane protein [Mycobacterium leprae Br4923]
          Length = 289

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 55/257 (21%), Positives = 110/257 (42%), Gaps = 12/257 (4%)

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
           R+ F  +  NL+ + G    + I+D    +      +   G    +  +++   L LI Q
Sbjct: 8   RARFPRAAANLNRY-GGAAARGIDDIGQMSWFG---LIALGNIPNALSRYRKETLRLIAQ 63

Query: 160 MYYVGVSGVPVVILISFVTGAV-------IAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           +  +G   + VV   + + G V       +A QG   L   G E F+    +++ +R   
Sbjct: 64  IG-MGTGAMAVVGGTAAIVGFVTLSGSSLVAIQGFASLGAIGVEAFTGFFAALINVRIAA 122

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            ++T +++A   G+   AE+G+M+I+EEIDA+  M +  +  L++ RI A ++ +  L  
Sbjct: 123 PVITGIVMAATVGAGATAELGAMRISEEIDALEVMSIKSISFLVTTRILAGLVVIVPLYA 182

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           +A   A +   I+    Y      +   F +     ++F   ++A  +   + I     G
Sbjct: 183 VAMIMAFLSPHIITTVLYGQSNGTYEHYFRTFLRPDDVFWSFLEAVIITAVVMITHCYYG 242

Query: 333 FAVGVHSNSLGKKVTTC 349
           +        +G+ V   
Sbjct: 243 YTANGGPVGVGEAVGRS 259


>gi|240168188|ref|ZP_04746847.1| hypothetical protein MkanA1_02657 [Mycobacterium kansasii ATCC
           12478]
          Length = 272

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 56/266 (21%), Positives = 114/266 (42%), Gaps = 13/266 (4%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170
               G   V+ ++ +   A      + + G    +  +++   L LI Q+  +G   + V
Sbjct: 1   MNRYGGAAVRGLDTTGRLAWF---TLVSLGNVPFALSRYRKETLRLIAQIG-MGTGAMAV 56

Query: 171 VILISFVTGAV-------IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           V   + + G V       +A QG   L   G E F+    +++ +R    ++T V +A  
Sbjct: 57  VGGTAAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAAPVVTGVAMAAT 116

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
            G+   AE+G+M+I+EEIDA+  MG+  V  L + RI A +  +  L  +A   A +   
Sbjct: 117 VGAGATAELGAMRISEEIDALEVMGIKSVCFLATTRILAGLTVIIPLYAMAMIMAFLSPQ 176

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           I     Y      +   F +     ++F   ++A  +   + +     G++ G     +G
Sbjct: 177 ITTTVLYGQSTGTYEHYFRTFLRPDDVFWSFLEAIIITAVVMVSHCYYGYSAGGGPVGVG 236

Query: 344 KKVTTCVVQSISIV--IIIDSLFAIF 367
           + V   +  S+  +  +++ +  A++
Sbjct: 237 EAVGRSMRFSLVSIPVVVLSAALALY 262


>gi|118470891|ref|YP_884757.1| hypothetical protein MSMEG_0344 [Mycobacterium smegmatis str. MC2
           155]
 gi|118172178|gb|ABK73074.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
           155]
          Length = 256

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 51/239 (21%), Positives = 103/239 (43%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG   + T +   +  +        + Q ++V    +   ++++     ++      
Sbjct: 11  VGALGGFFAMTLDVFITIARPPFAWREYLNQTWFVARVSLVPALMLTVPYTVLLVFTFNI 70

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L +FGA  FS    +I  + +IG ++T +++AG   +A+ A++G+  I EE+DA+R MG
Sbjct: 71  LLIEFGAADFSGTGAAIGTVSQIGPIVTVLVVAGAGSTAMCADLGARTIREELDAMRVMG 130

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +D ++ L+ PR+ A       L+       + G  +       +P   F +        A
Sbjct: 131 IDPIQALVVPRVLAATTVALALSATVIIVGLAGGFVFAVFIQHVPPGSFVAGLTVLTHGA 190

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           ++   L KA     + G++A  +G +VG     +G  V   VV +   +  I+ +    
Sbjct: 191 DVAVALAKAALFGLSAGLIACYKGISVGGGPAGVGNAVNETVVFTFMALFAINVIATAV 249


>gi|120401161|ref|YP_950990.1| hypothetical protein Mvan_0133 [Mycobacterium vanbaalenii PYR-1]
 gi|119953979|gb|ABM10984.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 289

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 48/233 (20%), Positives = 99/233 (42%), Gaps = 6/233 (2%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVPVVILISF 176
               +  H+   V++  G    +   ++  +L LI ++        V    V +V  ++ 
Sbjct: 27  RGLEAMGHVAVFVVTAVGSIGHALRFYRREMLRLIAEIGMGTGAMAVVGGTVAIVGFVTL 86

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
              +++A QG   L   G E F+    +++ +R    ++    +A   G+   AE+G+M+
Sbjct: 87  SGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAAPVVAGQALAATVGAGATAELGAMR 146

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           I+EEIDA+  MG+  +  L+S RI A  + +  L  +A   + + A +    +Y      
Sbjct: 147 ISEEIDALEVMGIKSISYLVSTRIMAGFVVIIPLYAMAIIMSFLSAQVTTTVFYGQSVGT 206

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
           +   F +     ++F   I+A  ++  + +     GF        +G+ V   
Sbjct: 207 YEHYFRTFLRPDDVFWSFIQAVIISVIVMLNHCYYGFYASGGPVGVGEAVGRS 259


>gi|296165084|ref|ZP_06847637.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295899577|gb|EFG79030.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 289

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 51/235 (21%), Positives = 98/235 (41%), Gaps = 6/235 (2%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVPVVILISFVT 178
                 ++   +S  G+   + ++++  LL ++ QM        V      +V  I+   
Sbjct: 29  LVEIGQMVWFALSAIGQIPFAVHRYRKELLRMVAQMGMGTGAMAVVGGTAAIVGFITLSA 88

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G+++A QG   L   G E F+  L +++ +R +  +     +A   G+   AE+G+M+I+
Sbjct: 89  GSLVAIQGYATLGNIGVEAFTGFLAALVNVRFVAPVAAGQALAATVGAGATAELGAMRIS 148

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+  M +  V  L S R+ A +I +  L  LA   A +   +     Y      + 
Sbjct: 149 EEIDALEVMSIRSVPFLASTRVVAGLIVIIPLYGLAMTMAFLSQQVTTVLLYGQSIGTYN 208

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
             FH+   L ++     +   +A  +       G+        +G+ V   +  S
Sbjct: 209 HYFHTFLRLNDVGWSFAEVILVAVVVMTTHCYYGYTATGGPVGVGEAVGRSMRLS 263


>gi|118466059|ref|YP_881723.1| TrnB2 protein [Mycobacterium avium 104]
 gi|118167346|gb|ABK68243.1| TrnB2 protein [Mycobacterium avium 104]
          Length = 294

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 64/290 (22%), Positives = 113/290 (38%), Gaps = 13/290 (4%)

Query: 91  KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFK 150
                 +P                  ++V   N   SQ       +S   +  A   ++K
Sbjct: 3   AAPARHRPMSVIPAPPRLARLSITLHRLVAGWNRLGSQTAFYVKALSLMWDAVA---RYK 59

Query: 151 GFLLSLIRQMYYVGVSGVPVVI-------LISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203
              L LI  M  +GV  + V+         +   TG+ I  Q    LS  G E  S    
Sbjct: 60  AETLRLIATM-SLGVGALAVIGGTVVVVTTLVMSTGSFIGIQLYRSLSDVGVEALSGFAS 118

Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263
           + L  R    L +A+ +A   G+   A++G+M+INEEIDA+  MG+  +  L S RI A 
Sbjct: 119 AYLNTRFAAPLTSAIGLAATIGAGATAQLGAMRINEEIDALEVMGIRAISYLASTRIVAG 178

Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323
           ++    L  L++ +  +    ++   +     V+   F++     ++   L++    A  
Sbjct: 179 VLVTVPLWCLSSLAGYLATRTLVVVAFGQAPGVYDHYFNTYLQPTDLIWSLLQVMATATV 238

Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           + +V    GF        +G+ V   V  S  +V+ +    A+   A G+
Sbjct: 239 VMLVHTYYGFNATGGPAGVGEAVGRSVRAS--LVVAVTVQLAVAMAAYGV 286


>gi|226304448|ref|YP_002764406.1| YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229494442|ref|ZP_04388205.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
 gi|226183563|dbj|BAH31667.1| putative YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229318804|gb|EEN84662.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
          Length = 283

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 48/236 (20%), Positives = 98/236 (41%), Gaps = 1/236 (0%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
           +  +   +     I + I    + +   A  LG        +   + +    +      +
Sbjct: 6   AGRFPRTRRQIGSISRSIDSIGDQALFFAKALGHAPKALMRYPRETLRLIAEISMGTGAL 65

Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
             +G   V +V  ++  TG  IA QG   L   G E  +    + + +R    ++  + +
Sbjct: 66  AVIG-GTVVIVGFLTLFTGGTIAVQGYSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGL 124

Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280
           A   G+   A++G+M+++EEIDA+ TM +  +  L+S R+ A +I++  L  LA  ++ +
Sbjct: 125 AATIGAGSTAQLGAMRVSEEIDALETMAIPSIPYLVSTRVMAGMIAIIPLYSLAVIASFV 184

Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            +       Y+    V+   F +     +I     +A  MA A+ ++    GF   
Sbjct: 185 ASRFATVFLYNQSGGVYDHYFTTFLIPTDILWSFAQAIVMALAVMLIHTYYGFNAT 240


>gi|111021669|ref|YP_704641.1| hypothetical protein RHA1_ro04697 [Rhodococcus jostii RHA1]
 gi|110821199|gb|ABG96483.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
          Length = 283

 Score =  141 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 48/236 (20%), Positives = 97/236 (41%), Gaps = 1/236 (0%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
           +  +   +       + I +    +   A  +G        +   + +    +      +
Sbjct: 6   AGRFPRTRKRFASASRSIDRLGEQALFFARAIGWAPRALMHYPKETLRLIAEISMGTGAL 65

Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
             +G   V +V  ++  TG  IA QG   L   G E  +    + + +R    ++  + +
Sbjct: 66  AVIG-GTVVIVGFLTLFTGGTIAVQGYSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGL 124

Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280
           A   G+   A++G+M+++EEIDA+ TM +  +  L+S R+ A +I++  L  LA  ++ +
Sbjct: 125 AATIGAGSTAQLGAMRVSEEIDALETMAIPSIPYLVSTRVMAGMIAIIPLYALAVIASFM 184

Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            +       YD    V+   F +     +I     +A  MA AI ++    GF   
Sbjct: 185 ASRFATVVLYDQSSGVYDHYFSTFLIPTDILWSFAQAIVMAIAIMLIHTYYGFNAS 240


>gi|226364206|ref|YP_002781988.1| YrbE family protein [Rhodococcus opacus B4]
 gi|226242695|dbj|BAH53043.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 283

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 48/236 (20%), Positives = 97/236 (41%), Gaps = 1/236 (0%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
           +  +   +       + I +    +   A  +G        +   + +    +      +
Sbjct: 6   AGRFPRTRRRFASASRSIDRLGEQALFFARAIGSAPRALVHYRRETLRLIAEISMGTGAL 65

Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
             +G   V +V  ++  TG  IA QG   L   G E  +    + + +R    ++  + +
Sbjct: 66  AVIG-GTVVIVGFLTLFTGGTIAVQGYSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGL 124

Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280
           A   G+   A++G+M+++EEIDA+ TM +  +  L+S R+ A +I++  L  LA  ++ +
Sbjct: 125 AATIGAGSTAQLGAMRVSEEIDALETMAIPSIPYLVSTRVMAGMIAIIPLYALAVIASFM 184

Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            +       YD    V+   F +     +I     +A  MA AI ++    GF   
Sbjct: 185 ASRFATVVLYDQSSGVYDHYFSTFLIPTDILWSFAQAIVMAIAIMLIHTYYGFNAS 240


>gi|118467026|ref|YP_884172.1| ABC transporter transmembrane protein [Mycobacterium avium 104]
 gi|118168313|gb|ABK69210.1| ABC transporter integral membrane protein [Mycobacterium avium 104]
          Length = 235

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 43/219 (19%), Positives = 99/219 (45%)

Query: 149 FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL 208
            +     +I Q + +        +L++   GA++A Q +  +++ GA         +  L
Sbjct: 7   LRLPFGEVIVQAWTLLKVTALPAVLMAIPFGAMVAVQLSGLVNEVGANSLVGSATGVAVL 66

Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268
           R+   +   +++ G + SAI ++ G+  I EE+DA++T+G+D VR L+ PR   L++  P
Sbjct: 67  RQGAPVTAGLLMGGAAASAIASDFGARAIREELDALKTLGIDPVRRLVVPRFLGLLLITP 126

Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328
            L ++     +  A ++      +    F+  F S A + +++  + K    A  + +++
Sbjct: 127 SLVVIVIAMGVGAAFVIATVVNGVTPGSFWLSFGSFAKMVDLWFTMGKGFIFAGIVAVIS 186

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            + G         +   V   VV ++  +++++      
Sbjct: 187 SQRGMEAKGGPRGVADAVNASVVLNVIFIVVVNLAITQL 225


>gi|254819937|ref|ZP_05224938.1| TrnB2 protein [Mycobacterium intracellulare ATCC 13950]
          Length = 282

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 62/265 (23%), Positives = 111/265 (41%), Gaps = 13/265 (4%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI--- 172
            ++V   N   SQ       +S   +  A   ++K   L LI  M  +G+  + ++    
Sbjct: 16  HRLVAGWNRLGSQTAFYVKALSLVWDAVA---RYKAETLRLIATM-SLGIGALAIIGGTV 71

Query: 173 ----LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
                +   TGA I  Q    LS  G E  S    + L  R    L +A+ +A   G+  
Sbjct: 72  VVVTTLVMSTGAFIGIQLYRSLSDVGVEALSGFASAYLNTRFAAPLTSAIGLAATIGAGA 131

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            A++G+M+INEEIDA+  MG+  +  L S RI A ++    L  L++ +  +    ++  
Sbjct: 132 TAQLGAMRINEEIDALEVMGIRAISYLASTRIVAGVLVTVPLWCLSSLAGYLATRTLVVV 191

Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
            +     V+   F++     ++   L++    A  + +V    GF        +G+ V  
Sbjct: 192 AFGQAPGVYDHYFNTYLQPTDLIWSLLQVIATATVVMLVHTYYGFNATGGPAGVGEAVGR 251

Query: 349 CVVQSISIVIIIDSLFAIFYFAIGI 373
            V  S  +V+ +    A+   A G+
Sbjct: 252 SVRAS--LVVAVTVQLAVAMAAYGV 274


>gi|108797096|ref|YP_637293.1| hypothetical protein Mmcs_0116 [Mycobacterium sp. MCS]
 gi|119866181|ref|YP_936133.1| hypothetical protein Mkms_0125 [Mycobacterium sp. KMS]
 gi|126432719|ref|YP_001068410.1| hypothetical protein Mjls_0106 [Mycobacterium sp. JLS]
 gi|108767515|gb|ABG06237.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
 gi|119692270|gb|ABL89343.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
 gi|126232519|gb|ABN95919.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 265

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 49/250 (19%), Positives = 102/250 (40%), Gaps = 4/250 (1%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +   +            +   TG+     ++++ F+L    Q +++        + +S  
Sbjct: 12  VRDQVRPGLEAVGGFVRMCVLTGKALFRPFQWREFIL----QAWFLFRVSFLPTVAVSVP 67

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
              +I       L++FGA   S    ++  + ++G L+T +++AG   +AI A++G+  I
Sbjct: 68  LTVLIIFTLNILLAEFGAADVSGAGAALGAVTQLGPLVTVLVVAGAGSTAICADLGARTI 127

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EEIDA+  +G+D +  L+ PR+ A      LL        ++G  I      ++    +
Sbjct: 128 REEIDALEVLGIDPIHRLVVPRVVASTFVALLLNGAVITIGLVGGFIFGVYIQNVSAGAY 187

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            S       L  +   ++KA       G+V    G  VG  +  +G  V   +V  +  +
Sbjct: 188 VSTLTLVTGLPEVLISVVKATTFGLIAGLVGCYRGLTVGGGAKGVGTGVNETLVLCVVAL 247

Query: 358 IIIDSLFAIF 367
             ++ +    
Sbjct: 248 FAVNVVLTTI 257


>gi|119867718|ref|YP_937670.1| hypothetical protein Mkms_1677 [Mycobacterium sp. KMS]
 gi|120401521|ref|YP_951350.1| hypothetical protein Mvan_0499 [Mycobacterium vanbaalenii PYR-1]
 gi|126434219|ref|YP_001069910.1| hypothetical protein Mjls_1626 [Mycobacterium sp. JLS]
 gi|145221252|ref|YP_001131930.1| hypothetical protein Mflv_0653 [Mycobacterium gilvum PYR-GCK]
 gi|315441853|ref|YP_004074732.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|49072909|gb|AAT51760.1| TrnB2 [Mycobacterium vanbaalenii PYR-1]
 gi|119693807|gb|ABL90880.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
 gi|119954339|gb|ABM11344.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
 gi|126234019|gb|ABN97419.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
 gi|145213738|gb|ABP43142.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
 gi|315260156|gb|ADT96897.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 285

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 58/258 (22%), Positives = 101/258 (39%), Gaps = 15/258 (5%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---------VPVVI 172
             D   QA   G  IS+T +          +   ++RQ+  +G+           V VV 
Sbjct: 25  WRDLGDQARFYGQSISSTVQAAT------TYRAEVLRQIAAIGLGAGSLAVVGGTVAVVA 78

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
            ++  T A +A Q   Q+SQ G E  +    + + +R      +A   A   G+   A++
Sbjct: 79  FLNLSTSAALASQAYNQMSQVGVEALAGFTSAYVNVRLATPASSAFAFAATIGAGTTAQL 138

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           G+MKINEEIDA+  MG+  +  L S R+ A +I +  L  +A   +     ++   +Y  
Sbjct: 139 GAMKINEEIDALAVMGIRPIAYLASTRLLAGVIVVVPLYCVALLMSFFSVRVITTAFYGQ 198

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
              VF   F +      +F         A  I ++    G         +G+ V      
Sbjct: 199 GSGVFDHYFDTFLNPQAVFFSFAVTVAAALVIMLIHTYYGLNATGGPAGVGEAVGRATRT 258

Query: 353 SISIVIIIDSLFAIFYFA 370
           S+    ++  L  +  + 
Sbjct: 259 SLIASQMVILLVTLALYG 276


>gi|296171120|ref|ZP_06852573.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295894376|gb|EFG74129.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 284

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 57/262 (21%), Positives = 107/262 (40%), Gaps = 11/262 (4%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPV 170
           ++    N   +Q       ++          ++   ++ L+ QM        V    V +
Sbjct: 19  RVAAGWNRVGAQVKFYATAVTEMRTAFL---RYWKEIIRLVAQMSLGTGALAVIGGTVVI 75

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           V  ++  TGAVIA QG  QLS  G E  +  + + + +R I   +  V +A   G+   A
Sbjct: 76  VGFLTLSTGAVIAVQGYNQLSGIGVEAMTGFISAYVNVRIISPAVAGVGLAATIGAGATA 135

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           ++G+M+I +EIDA+  M +  V  L+S R+ A ++ +  L  +A   A   A       Y
Sbjct: 136 QLGAMRIADEIDALEVMAVRSVAYLVSTRVAAGVVVVIPLYCVAVVCAFQAARFGTTGIY 195

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
                V+   F +     ++    +     A A+ +V    G+        +G+ V   V
Sbjct: 196 GQSTGVYDHYFRTFLNSIDLLWSFVTVIAAAIAVMLVHTYYGYNASGGPAGVGRAVGHSV 255

Query: 351 VQSISIVIIIDSLFAIFYFAIG 372
             S+ ++ +I  +  +     G
Sbjct: 256 RTSLIVLTLI--VLTVSLSVHG 275


>gi|296165199|ref|ZP_06847746.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295899388|gb|EFG78847.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 258

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 49/194 (25%), Positives = 86/194 (44%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +     F       +      +RQ  ++  + V   IL+S      ++ Q A    Q GA
Sbjct: 38  VRTVQYFFFDLLTGRFQWQEFVRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGA 97

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
              +     +  +R+   L+ AV++A   GSAI A++GS  + EE DA+  MG+  +R L
Sbjct: 98  TSLAGAASGLAVIRQGASLVAAVLMASAVGSAITADLGSRTMREETDAMEVMGVSVIRRL 157

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PR+ A ++    LT +  F+    + +    + +     F S F S AT  +I   L+
Sbjct: 158 VVPRLAAAVMIGVALTGVVCFAGFFASYMFNVYFQNGAPGSFVSTFASFATTGDIILALV 217

Query: 316 KAPFMACAIGIVAM 329
           KA      + +V+ 
Sbjct: 218 KAIVFGAIVAVVSS 231


>gi|296141463|ref|YP_003648706.1| hypothetical protein Tpau_3789 [Tsukamurella paurometabola DSM
           20162]
 gi|296029597|gb|ADG80367.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM
           20162]
          Length = 272

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 60/250 (24%), Positives = 109/250 (43%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170
            Y + + +  F     +    + L  S          K    +   I Q   +       
Sbjct: 6   LYRLYQLVAIFTRSLATIGKSVVLARSIVTWTVRGIVKGNFAVAETITQAVTLLRVTTLP 65

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
            IL++   GAV++ Q    +   GA         I  +R+   L T V++ G   SAI A
Sbjct: 66  AILVAVPFGAVVSVQVGALVDTVGANSLVGAASGIGIIRQGAPLATGVLLGGVCASAIAA 125

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           ++GS  + EE+ A++ MG+D +  LI+PR+ AL+I  P+L +     A++ A  V    +
Sbjct: 126 DLGSRTVREELQAMQVMGVDPIARLIAPRMLALMIIAPMLLVAIVAVAMMVALTVSVWQF 185

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
            +    F+S F + +  +++   ++KA   A  +G+VA   G         +   V + V
Sbjct: 186 GLSSGGFWSSFGAFSAPSDLAFAVLKAETGAMIVGLVAGLRGLEASGGPRGVADGVNSSV 245

Query: 351 VQSISIVIII 360
           V SI+++ + 
Sbjct: 246 VLSITLIFLA 255


>gi|167946701|ref|ZP_02533775.1| hypothetical protein Epers_09188 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 258

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 53/259 (20%), Positives = 113/259 (43%), Gaps = 2/259 (0%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   +G++ + ++         +  V+ +           +    + I Q+ + G+  +P
Sbjct: 1   MISLLGRRSLNYLLYIIDLVVFVMAVMRSWRN--RGGLFNRASRAASITQLIFSGIDALP 58

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
            + +++   G  +  Q  F    FG E     L++ L   E G LLTA+++ GRSGSAI 
Sbjct: 59  TITILALAVGLSVTTQLIFAAQVFGQEADVASLLANLVALEFGSLLTAIVMIGRSGSAIA 118

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
            ++G+M +N E++ +  +G+D     +SPR+  ++I+  +L I  +  +++    +    
Sbjct: 119 VDLGNMSLNREVEGLELLGIDVHAFFVSPRLIGMVIAQLVLAIYFSAFSLVTGITLAALL 178

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
                  +     S     ++    IK       IG  A  +G +VG     + +     
Sbjct: 179 ESTSNFKYLFAVVSAFEPLDLLLFFIKNLLFGLVIGANACLKGLSVGQSVTQVPQVTQKA 238

Query: 350 VVQSISIVIIIDSLFAIFY 368
           +V S+ +V ++D +F +  
Sbjct: 239 IVNSLVMVFVLDGVFVLIL 257


>gi|324999496|ref|ZP_08120608.1| hypothetical protein PseP1_12046 [Pseudonocardia sp. P1]
          Length = 285

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 92/226 (40%), Gaps = 1/226 (0%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
               + +   ++ Q   +      +++ +  V        G F  +  G   ++  + S+
Sbjct: 51  PLALRLYPSEVLAQAGNLVRGSALIILFLIAVLALQSGVGGHFIFANPGINSYAGAIYSV 110

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
             +R +  ++   ++A + G  IVAE+GSM+INEE+DA+  MGL     L   R+ A ++
Sbjct: 111 ALMRGLVEVIFGWIVAAKIGCGIVAEMGSMRINEEVDALDVMGLRSRAYLAGTRVAAAML 170

Query: 266 SLPLLTILANFSAIIGASIVIWKYYD-IPFAVFFSRFHSTATLANIFTGLIKAPFMACAI 324
            LP L + A         ++     + +    F+   +    L +  T LI         
Sbjct: 171 VLPFLFVTALLVQFQAGYLMSVHGMNTVSEGAFYEYLYLFQNLRDFITALIWGSVTGVMC 230

Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            IVA   G+        +G+     +  ++ ++  +  +FA  ++ 
Sbjct: 231 VIVATFYGYNAKGGPVGVGESTARSMTVNLVLISALAVVFAQLFYG 276


>gi|325674885|ref|ZP_08154572.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Rhodococcus equi ATCC 33707]
 gi|325554471|gb|EGD24146.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Rhodococcus equi ATCC 33707]
          Length = 280

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 50/226 (22%), Positives = 96/226 (42%), Gaps = 9/226 (3%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPV 170
           +  + ++    QA      +            +K  +L LI ++        V    V +
Sbjct: 15  RTSRSVDRVGEQALFFWRALVWAPRALVH---YKKEVLRLIAEISMGTGALAVIGGTVVI 71

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           V  ++  TG  IA QG   L   G E  +    + + +R    ++  + +A   G+   A
Sbjct: 72  VGFLTLFTGGTIAVQGFSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGLAATIGAGSTA 131

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           ++G+M+++EEIDA+ +M +  V  L+S R+ A +I++  L  LA  ++ + +       Y
Sbjct: 132 QLGAMRVSEEIDALESMAIPSVPYLVSTRVMAGMIAIVPLYSLAVIASFVASRFATVFLY 191

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           D    V+   F +     +I     +A  MA A+ ++    GF   
Sbjct: 192 DQSPGVYDHYFSTFLNPTDILWSFAQAIAMALAVMLIHTYYGFNAS 237


>gi|41409701|ref|NP_962537.1| hypothetical protein MAP3603 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41398533|gb|AAS06153.1| hypothetical protein MAP_3603 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 251

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 47/218 (21%), Positives = 91/218 (41%), Gaps = 6/218 (2%)

Query: 138 NTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
                  +   ++   L LI Q+        V    V +V  ++    +++A QG   L 
Sbjct: 4   ALAHIPHALSHYRKETLRLIAQIGMGTGAMAVIGGTVAIVGFVTLSGSSLVAIQGFASLG 63

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
             G E F+    +++ +R    ++T + +A   G+   AE+G+M+I+EEIDA+  MG+  
Sbjct: 64  NIGVEAFTGFFAALINVRIAAPVVTGIAMAATVGAGATAELGAMRISEEIDALEVMGIKS 123

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           +  L + RI A ++ +  L  LA   + +   I     Y      +   F +     ++F
Sbjct: 124 ISFLATTRIMAGLVVIIPLYALAMIMSFLSPQITTTVLYGQSNGTYEHYFRTFLRPDDVF 183

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
              ++A  +   + I     G+  G     +G+ V   
Sbjct: 184 WSFLEAIIITAVVMITHCFYGYNAGGGPVGVGEAVGRS 221


>gi|54023080|ref|YP_117322.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54014588|dbj|BAD55958.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 281

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 55/233 (23%), Positives = 107/233 (45%), Gaps = 4/233 (1%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
           V    G+     ++++  LL   R    V V+ VP + L++   G +++ Q    +   G
Sbjct: 43  VTGTVGDLIRREFQWREALLQAWR---LVTVTAVPAI-LMAVPFGVIVSIQVGNLIHTLG 98

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
           A+        +  +++   + T  ++ G   +AI A++G+  I EEIDA+ TMG+  +  
Sbjct: 99  ADSLVGATGGLGVIKQGAPMATGFLLGGAGAAAIAADLGARTIREEIDALHTMGISPIHR 158

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L+ PR+ A++I  PLL +L  F  ++    V     D+    +++ F S  + A+++  L
Sbjct: 159 LVIPRMVAMLIVAPLLNVLVIFVGVLAGYAVAIGGQDVTPGSYWATFGSFTSTADVWVSL 218

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            KA      + I+A + G         +   V   VV S+  ++ ++ L    
Sbjct: 219 GKALIFGFLVVIIACQRGLEAKGGPRGVADAVNAAVVLSVVSIVCVNLLLTQV 271


>gi|312138209|ref|YP_004005545.1| integral membrane protein yrbe2b [Rhodococcus equi 103S]
 gi|311887548|emb|CBH46860.1| putative integral membrane protein YrbE2B [Rhodococcus equi 103S]
          Length = 283

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 50/226 (22%), Positives = 96/226 (42%), Gaps = 9/226 (3%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPV 170
           +  + ++    QA      +            +K  +L LI ++        V    V +
Sbjct: 18  RTSRSVDRVGEQALFFWRALVWAPRALVH---YKKEVLRLIAEISMGTGALAVIGGTVVI 74

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           V  ++  TG  IA QG   L   G E  +    + + +R    ++  + +A   G+   A
Sbjct: 75  VGFLTLFTGGTIAVQGFSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGLAATIGAGSTA 134

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           ++G+M+++EEIDA+ +M +  V  L+S R+ A +I++  L  LA  ++ + +       Y
Sbjct: 135 QLGAMRVSEEIDALESMAIPSVPYLVSTRVMAGMIAIVPLYSLAVIASFVASRFATVFLY 194

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           D    V+   F +     +I     +A  MA A+ ++    GF   
Sbjct: 195 DQSPGVYDHYFSTFLNPTDILWSFAQAIAMALAVMLIHTYYGFNAS 240


>gi|291614199|ref|YP_003524356.1| hypothetical protein Slit_1738 [Sideroxydans lithotrophicus ES-1]
 gi|291584311|gb|ADE11969.1| protein of unknown function DUF140 [Sideroxydans lithotrophicus
           ES-1]
          Length = 260

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 50/224 (22%), Positives = 96/224 (42%), Gaps = 2/224 (0%)

Query: 144 ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203
               +         RQ+++ GV  + +V +   ++GA++  Q    +   G    ++ ++
Sbjct: 35  LRVLRIPPVNAVFHRQIFFTGVEALRIVAVFGLLSGALVITQITSLVG--GDSELTVKIL 92

Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263
               +RE+G L  A++I  RS +AI +E+  MK   E+ ++  MG+     L+ PRI  +
Sbjct: 93  IWTLVREVGPLFAAIIIIARSSAAIASELALMKTRHEMTSLYRMGIPPQDYLLVPRIAGV 152

Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323
            +++  LTI     AI G   +   + ++ +     RF  T  L+       K      A
Sbjct: 153 TLAVLGLTIYFQVVAIGGGLAISAMFQNVSYLDQVGRFLQTVKLSEFAVVAFKGCLFGLA 212

Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           I  ++   G         + K     V+QS+  V  +D++ A  
Sbjct: 213 ISTISCYNGMQAQPSVTEVPKVAIKAVLQSLLFVFTLDAVIAYL 256


>gi|54022503|ref|YP_116745.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54014011|dbj|BAD55381.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 283

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 47/224 (20%), Positives = 96/224 (42%), Gaps = 9/224 (4%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVP 169
           +++   ++     A      +++          ++   + LI ++        V    V 
Sbjct: 17  RRMSDSLDSVGKHAVFYAQALASIPRALMH---YRTETIRLIAEISMGTGALAVIGGTVV 73

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +V  ++  +G  IA QG   L   G E  +    + L +R    +++ + +A   G+   
Sbjct: 74  IVGFLTLFSGGTIAVQGYSSLGNIGVEALTGFFSAFLNVRIAAPVISGIGLAATIGAGST 133

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A++G+M+++EEIDA+ TM +  V  LI  R+ A +I++  L  LA  ++   A       
Sbjct: 134 AQLGAMRVSEEIDALETMAIRPVPYLIGTRVLAGMIAIVPLYALAVIASFFAARFATVVI 193

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
           Y     V+   F +    ++I     +A  MA A+ ++    G+
Sbjct: 194 YGQSAGVYDHYFSTFLIPSDILWSFSQAILMALAVMMIHTYYGY 237


>gi|240170712|ref|ZP_04749371.1| hypothetical protein MkanA1_15460 [Mycobacterium kansasii ATCC
           12478]
          Length = 284

 Score =  134 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 65/274 (23%), Positives = 108/274 (39%), Gaps = 8/274 (2%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY-- 162
           N        IG +    +         +        E   +  ++   +L LI QM    
Sbjct: 4   NPPAERLAWIGGRASGLVAGWNRVGIQVAFYARTIAEMRTAFGRYGKEILRLIAQMSLGT 63

Query: 163 ----VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
               V    V +V  ++  TGAVIA QG  QLS  G E  +  + + + +R I   +  V
Sbjct: 64  GALAVIGGTVVIVGFLTLSTGAVIAVQGYNQLSGIGVEAMTGFISAYVNVRIISPAVAGV 123

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
            +A   G+   A++G+M+I EEIDA+  M +  V  L+S R+ A ++ +  L  +A   A
Sbjct: 124 GLAATIGAGATAQLGAMRIAEEIDALEVMAVRSVAYLVSTRVVAGVVVVIPLYCIAVVCA 183

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
              A       Y     V+   F +     ++    +     A AI +V    G+     
Sbjct: 184 FQAARFGTTGVYGQSTGVYDHYFRTFLNSTDLLWSFLTVIAAAIAIMLVHTHYGYTAKGG 243

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
              +G  V   V  S+ ++ +I  + AI     G
Sbjct: 244 PAGVGAAVGHSVRTSLIVLTLI--VLAISLSVHG 275


>gi|169631232|ref|YP_001704881.1| hypothetical protein MAB_4154c [Mycobacterium abscessus ATCC 19977]
 gi|169243199|emb|CAM64227.1| Conserved hypothetical protein [Mycobacterium abscessus]
          Length = 286

 Score =  134 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 52/262 (19%), Positives = 112/262 (42%), Gaps = 1/262 (0%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
                +G+   KF   +   A  L  + +   ++   + +    +      +  +G   V
Sbjct: 17  RYMRGLGRSFDKFGEQALFYAQSLSYIPAALTKYRKETIRVLAEITMGTGALVMIG-GTV 75

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            V + ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+  
Sbjct: 76  GVAVFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVVAGIAMAATIGAGT 135

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            A++G+M++ EEIDA+ TM +  +  L+S R+ A +I++  L  L+  +A   +      
Sbjct: 136 TAQLGAMRVAEEIDALETMAVHAISYLVSTRLVAGLIAIIPLYSLSVLAAFFASRATTVM 195

Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
                  V+   F++     ++    ++A  M+  + +V    GF        +G  V  
Sbjct: 196 INGQSPGVYDHYFNTFLVPTDLLWSFLQAIVMSVVVMLVHTSYGFNASGGPVGVGVAVGQ 255

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            V  S+ +V+++    ++  + 
Sbjct: 256 AVRTSLIVVVLVTLFISLAVYG 277


>gi|110348077|gb|ABG72766.1| YrbE1B-HA [Expression vector yrbE1AB]
          Length = 300

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 52/240 (21%), Positives = 104/240 (43%), Gaps = 10/240 (4%)

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
           R+ F  +  NL    G    + ++++          +++ G+   +   ++   L LI Q
Sbjct: 8   RARFPRAVANL-RQYGGAAARGLDEAGQLTWF---ALTSIGQIAHALRYYRKETLRLIAQ 63

Query: 160 M------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
           +        V    V +V  ++    +++A QG   L   G E F+    +++ +R  G 
Sbjct: 64  IGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGP 123

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           ++T V +A   G+   AE+G+M+I+EEIDA+  MG+  +  L S RI A ++ +  L  L
Sbjct: 124 VVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYAL 183

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
           A   + +   I     Y      +   F +     ++F   ++A  +   + +     G+
Sbjct: 184 AMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYYGY 243


>gi|289752627|ref|ZP_06512005.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
 gi|289693214|gb|EFD60643.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
          Length = 295

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 100/255 (39%), Gaps = 9/255 (3%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
              Y          G    + +  + + A    + +   G       +++   L L+ ++
Sbjct: 14  RARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALR---RYRRETLRLVAEI 70

Query: 161 ------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
                   V    V ++  ++   G++IA QG   L   G E F+    ++   R    +
Sbjct: 71  GMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPI 130

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           ++ V +A   G+   A++G+M+I+EEIDA+  MG+  +  L+S RI   ++ +  L  LA
Sbjct: 131 VSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALA 190

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
              A     +V   +Y      +   F +     ++   +++   +A  + I     G+ 
Sbjct: 191 LDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYT 250

Query: 335 VGVHSNSLGKKVTTC 349
                  +G+ V   
Sbjct: 251 ASGGPVGVGQAVGRS 265


>gi|289552841|ref|ZP_06442051.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           KZN 605]
 gi|289437473|gb|EFD19966.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           KZN 605]
          Length = 294

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 100/255 (39%), Gaps = 9/255 (3%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
              Y          G    + +  + + A    + +   G       +++   L L+ ++
Sbjct: 13  RARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALR---RYRRETLRLVAEI 69

Query: 161 ------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
                   V    V ++  ++   G++IA QG   L   G E F+    ++   R    +
Sbjct: 70  GMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPI 129

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           ++ V +A   G+   A++G+M+I+EEIDA+  MG+  +  L+S RI   ++ +  L  LA
Sbjct: 130 VSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALA 189

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
              A     +V   +Y      +   F +     ++   +++   +A  + I     G+ 
Sbjct: 190 LDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYT 249

Query: 335 VGVHSNSLGKKVTTC 349
                  +G+ V   
Sbjct: 250 ASGGPVGVGQAVGRS 264


>gi|289441977|ref|ZP_06431721.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           T46]
 gi|289568521|ref|ZP_06448748.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           T17]
 gi|289749085|ref|ZP_06508463.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           T92]
 gi|289414896|gb|EFD12136.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           T46]
 gi|289542275|gb|EFD45923.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           T17]
 gi|289689672|gb|EFD57101.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           T92]
          Length = 295

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 100/255 (39%), Gaps = 9/255 (3%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
              Y          G    + +  + + A    + +   G       +++   L L+ ++
Sbjct: 14  RARYPRTAASLDRYGGGTARRLERTGTFARFTRVSVVQIGWALR---RYRRETLRLVAEI 70

Query: 161 ------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
                   V    V ++  ++   G++IA QG   L   G E F+    ++   R    +
Sbjct: 71  GMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPI 130

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           ++ V +A   G+   A++G+M+I+EEIDA+  MG+  +  L+S RI   ++ +  L  LA
Sbjct: 131 VSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALA 190

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
              A     +V   +Y      +   F +     ++   +++   +A  + I     G+ 
Sbjct: 191 LDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYT 250

Query: 335 VGVHSNSLGKKVTTC 349
                  +G+ V   
Sbjct: 251 ASGGPVGVGQAVGRS 265


>gi|289756667|ref|ZP_06516045.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|289712231|gb|EFD76243.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|326902420|gb|EGE49353.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           W-148]
          Length = 295

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 100/255 (39%), Gaps = 9/255 (3%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
              Y          G    + +  + + A    + +   G       +++   L L+ ++
Sbjct: 14  RARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALR---RYRRETLRLVAEI 70

Query: 161 ------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
                   V    V ++  ++   G++IA QG   L   G E F+    ++   R    +
Sbjct: 71  GMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVETFTGFFAALANTRVAAPI 130

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           ++ V +A   G+   A++G+M+I+EEIDA+  MG+  +  L+S RI   ++ +  L  LA
Sbjct: 131 VSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALA 190

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
              A     +V   +Y      +   F +     ++   +++   +A  + I     G+ 
Sbjct: 191 LDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYT 250

Query: 335 VGVHSNSLGKKVTTC 349
                  +G+ V   
Sbjct: 251 ASGGPVGVGQAVGRS 265


>gi|15607728|ref|NP_215102.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis H37Rv]
 gi|31791770|ref|NP_854263.1| integral membrane protein YrbE2b [Mycobacterium bovis AF2122/97]
 gi|121636506|ref|YP_976729.1| integral membrane protein YrbE2b [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148660357|ref|YP_001281880.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis H37Ra]
 gi|148821790|ref|YP_001286544.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis F11]
 gi|224988978|ref|YP_002643665.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253797522|ref|YP_003030523.1| hypothetical protein TBMG_00595 [Mycobacterium tuberculosis KZN
           1435]
 gi|289446141|ref|ZP_06435885.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           CPHL_A]
 gi|289573188|ref|ZP_06453415.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis K85]
 gi|289744302|ref|ZP_06503680.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis
           02_1987]
 gi|289760707|ref|ZP_06520085.1| hypothetical integral membrane protein yrbE2B [Mycobacterium
           tuberculosis GM 1503]
 gi|298524075|ref|ZP_07011484.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|308231594|ref|ZP_07413029.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu001]
 gi|308370001|ref|ZP_07419915.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu002]
 gi|308370453|ref|ZP_07421552.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu003]
 gi|308371712|ref|ZP_07425924.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu004]
 gi|308373528|ref|ZP_07432668.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu005]
 gi|308374049|ref|ZP_07434638.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu006]
 gi|308375204|ref|ZP_07443071.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu007]
 gi|308376450|ref|ZP_07438864.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu008]
 gi|308377469|ref|ZP_07479264.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu009]
 gi|308378677|ref|ZP_07483457.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu010]
 gi|308379821|ref|ZP_07487689.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu011]
 gi|308395898|ref|ZP_07492196.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu012]
 gi|2222770|emb|CAB09950.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE2B
           [Mycobacterium tuberculosis H37Rv]
 gi|31617357|emb|CAD93465.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE2B
           [Mycobacterium bovis AF2122/97]
 gi|121492153|emb|CAL70618.1| Conserved hypothetical integral membrane protein yrbE2B
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148504509|gb|ABQ72318.1| conserved hypothetical integral membrane protein YrbE2b
           [Mycobacterium tuberculosis H37Ra]
 gi|148720317|gb|ABR04942.1| hypothetical integral membrane protein yrbE2B [Mycobacterium
           tuberculosis F11]
 gi|224772091|dbj|BAH24897.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253319025|gb|ACT23628.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           KZN 1435]
 gi|289419099|gb|EFD16300.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           CPHL_A]
 gi|289537619|gb|EFD42197.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis K85]
 gi|289684830|gb|EFD52318.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis
           02_1987]
 gi|289708213|gb|EFD72229.1| hypothetical integral membrane protein yrbE2B [Mycobacterium
           tuberculosis GM 1503]
 gi|298493869|gb|EFI29163.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|308216591|gb|EFO75990.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu001]
 gi|308325672|gb|EFP14523.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu002]
 gi|308331898|gb|EFP20749.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu003]
 gi|308335685|gb|EFP24536.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu004]
 gi|308337264|gb|EFP26115.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu005]
 gi|308343189|gb|EFP32040.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu006]
 gi|308347056|gb|EFP35907.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu007]
 gi|308350999|gb|EFP39850.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu008]
 gi|308355633|gb|EFP44484.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu009]
 gi|308359588|gb|EFP48439.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu010]
 gi|308363516|gb|EFP52367.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu011]
 gi|308367197|gb|EFP56048.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu012]
 gi|328457305|gb|AEB02728.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           KZN 4207]
          Length = 295

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 100/255 (39%), Gaps = 9/255 (3%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
              Y          G    + +  + + A    + +   G       +++   L L+ ++
Sbjct: 14  RARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALR---RYRRETLRLVAEI 70

Query: 161 ------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
                   V    V ++  ++   G++IA QG   L   G E F+    ++   R    +
Sbjct: 71  GMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPI 130

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           ++ V +A   G+   A++G+M+I+EEIDA+  MG+  +  L+S RI   ++ +  L  LA
Sbjct: 131 VSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALA 190

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
              A     +V   +Y      +   F +     ++   +++   +A  + I     G+ 
Sbjct: 191 LDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYT 250

Query: 335 VGVHSNSLGKKVTTC 349
                  +G+ V   
Sbjct: 251 ASGGPVGVGQAVGRS 265


>gi|260203313|ref|ZP_05770804.1| hypothetical protein MtubK8_03240 [Mycobacterium tuberculosis K85]
          Length = 298

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 52/256 (20%), Positives = 106/256 (41%), Gaps = 10/256 (3%)

Query: 84  LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFC 143
           +        +      R+ F  +  NL    G    + ++++          +++ G+  
Sbjct: 1   MCDSGRGADMSTAAVLRARFPRAVANL-RQYGGAAARGLDEAGQLTWF---ALTSIGQIA 56

Query: 144 ASSYKFKGFLLSLIRQM------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
            +   ++   L LI Q+        V    V +V  ++    +++A QG   L   G E 
Sbjct: 57  HALRYYRKETLRLIAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEA 116

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
           F+    +++ +R  G ++T V +A   G+   AE+G+M+I+EEIDA+  MG+  +  L S
Sbjct: 117 FTGFFAALINVRIAGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLAS 176

Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
            RI A ++ +  L  LA   + +   I     Y      +   F +     ++F   ++A
Sbjct: 177 TRIMAGLVVIIPLYALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPEDVFWSFLEA 236

Query: 318 PFMACAIGIVAMKEGF 333
             +   + +     G+
Sbjct: 237 LIITAIVMVSHCYYGY 252


>gi|225712538|gb|ACO12115.1| UPF0393 membrane protein RBE_1340 [Lepeophtheirus salmonis]
          Length = 215

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 40/193 (20%), Positives = 82/193 (42%), Gaps = 1/193 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G   +   +    + K K +   +I +MY +G+  +P V  +S   GA++  Q +  + 
Sbjct: 7   VGKYTTLVYQALQPAEKKKVYYQQIIYEMYELGIKSIPFVAFVSIFVGAILTLQTSANIK 66

Query: 192 QFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
                 +          + E    + ++++AG+ GS I + IG+M++ E+IDA+  MG++
Sbjct: 67  NPLIPKYLVGFATRESIMVEFSPTIISLLLAGKIGSNIASGIGTMRVTEQIDALEIMGVN 126

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
               LI P+I AL++  P +  L+    + G  +         +  F         +   
Sbjct: 127 SAGYLIYPKIVALMLINPFIISLSIIIGVGGGWLAALMTGSTTYVQFIEGIQWDFNMMKY 186

Query: 311 FTGLIKAPFMACA 323
              ++K    A  
Sbjct: 187 IYAMVKTILFAFL 199


>gi|167970289|ref|ZP_02552566.1| hypothetical integral membrane protein yrbE1B [Mycobacterium
           tuberculosis H37Ra]
 gi|215406161|ref|ZP_03418342.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis
           02_1987]
 gi|215425375|ref|ZP_03423294.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis T92]
 gi|215433088|ref|ZP_03431007.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis
           EAS054]
 gi|215448447|ref|ZP_03435199.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis T85]
 gi|218755902|ref|ZP_03534698.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis GM
           1503]
 gi|219555966|ref|ZP_03535042.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis T17]
 gi|254549107|ref|ZP_05139554.1| hypothetical protein Mtube_01356 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260185031|ref|ZP_05762505.1| hypothetical protein MtubCP_03117 [Mycobacterium tuberculosis
           CPHL_A]
 gi|260199171|ref|ZP_05766662.1| hypothetical protein MtubT4_03255 [Mycobacterium tuberculosis T46]
 gi|294994642|ref|ZP_06800333.1| hypothetical protein Mtub2_09022 [Mycobacterium tuberculosis 210]
 gi|297632646|ref|ZP_06950426.1| hypothetical protein MtubK4_00906 [Mycobacterium tuberculosis KZN
           4207]
 gi|297729621|ref|ZP_06958739.1| hypothetical protein MtubKR_00936 [Mycobacterium tuberculosis KZN
           R506]
 gi|313656947|ref|ZP_07813827.1| hypothetical protein MtubKV_00921 [Mycobacterium tuberculosis KZN
           V2475]
          Length = 298

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 52/256 (20%), Positives = 106/256 (41%), Gaps = 10/256 (3%)

Query: 84  LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFC 143
           +        +      R+ F  +  NL    G    + ++++          +++ G+  
Sbjct: 1   MCDSGRGADMSTAAVLRARFPRAVANL-RQYGGAAARGLDEAGQLTWF---ALTSIGQIA 56

Query: 144 ASSYKFKGFLLSLIRQM------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
            +   ++   L LI Q+        V    V +V  ++    +++A QG   L   G E 
Sbjct: 57  HALRYYRKETLRLIAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEA 116

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
           F+    +++ +R  G ++T V +A   G+   AE+G+M+I+EEIDA+  MG+  +  L S
Sbjct: 117 FTGFFAALINVRIAGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLAS 176

Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
            RI A ++ +  L  LA   + +   I     Y      +   F +     ++F   ++A
Sbjct: 177 TRIMAGLVVIIPLYALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEA 236

Query: 318 PFMACAIGIVAMKEGF 333
             +   + +     G+
Sbjct: 237 LIITAIVMVSHCYYGY 252


>gi|118618293|ref|YP_906625.1| integral membrane protein, Yrb3B [Mycobacterium ulcerans Agy99]
 gi|118570403|gb|ABL05154.1| conserved hypothetical integral membrane protein, Yrb3B
           [Mycobacterium ulcerans Agy99]
          Length = 230

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 48/201 (23%), Positives = 85/201 (42%)

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             V +V  +   TGA++A QG  Q +  G E  +    +    REI      V +A   G
Sbjct: 17  GTVVIVGFLGMTTGAIVAVQGYNQFASVGVEALTGFASAFFNAREIQPGTVMVALAATVG 76

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           +   A++G+M+INEEIDA+  +G+  V  L S R+ A ++    L  +   +A + A   
Sbjct: 77  AGATAQLGAMRINEEIDALEVIGIRSVSYLASTRVLAGVVVAIPLFCVGLITAYLAARAG 136

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
               Y     V+   F++     ++     +   +A  I +V    G+        +G+ 
Sbjct: 137 TTAIYGQGSGVYDHYFNTFLRPTDVLWSSFEVVVLALMIMLVCTYYGYNAHGGPAGVGEA 196

Query: 346 VTTCVVQSISIVIIIDSLFAI 366
           V   V  S+ +  I   +  +
Sbjct: 197 VGRAVRASMVVASIAIVIMTL 217


>gi|15839990|ref|NP_335027.1| hypothetical protein MT0617 [Mycobacterium tuberculosis CDC1551]
 gi|254230928|ref|ZP_04924255.1| hypothetical integral membrane protein yrbE2B [Mycobacterium
           tuberculosis C]
 gi|254363546|ref|ZP_04979592.1| hypothetical integral membrane protein yrbE2B [Mycobacterium
           tuberculosis str. Haarlem]
 gi|13880132|gb|AAK44841.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|124599987|gb|EAY58997.1| hypothetical integral membrane protein yrbE2B [Mycobacterium
           tuberculosis C]
 gi|134149060|gb|EBA41105.1| hypothetical integral membrane protein yrbE2B [Mycobacterium
           tuberculosis str. Haarlem]
 gi|323720940|gb|EGB30005.1| hypothetical protein TMMG_03291 [Mycobacterium tuberculosis
           CDC1551A]
          Length = 295

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 101/255 (39%), Gaps = 9/255 (3%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
              Y          G    + +  + + A    + +   G       +++   L L+ ++
Sbjct: 14  RARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALR---RYRRETLRLVAEI 70

Query: 161 ------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
                   V    V ++  ++   G++IA QG   L   G E F+    ++   R    +
Sbjct: 71  GMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPI 130

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           ++ V +A   G+   A++G+M+I+EEIDA+  MG+  +  L+S RI   ++ +  L  LA
Sbjct: 131 VSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALA 190

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
              A     +V   +Y      +   F +     ++   +++   +A  + I+    G+ 
Sbjct: 191 LDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMIIHCYYGYT 250

Query: 335 VGVHSNSLGKKVTTC 349
                  +G+ V   
Sbjct: 251 ASGGPVGVGQAVGRS 265


>gi|108761681|ref|YP_632089.1| hypothetical protein MXAN_3909 [Myxococcus xanthus DK 1622]
 gi|108465561|gb|ABF90746.1| putative membrane protein [Myxococcus xanthus DK 1622]
          Length = 257

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 54/261 (20%), Positives = 114/261 (43%), Gaps = 9/261 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           L   +G+  +  +  + +   ++G  +             K     L R +   G   +P
Sbjct: 3   LLTRLGRTALDALRGTGALGLVVGRTVLAL---------PKLERRELGRALVQFGYGSLP 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           + +  + + G ++  Q    + +FGA  F         L E G LL  ++++ R G+   
Sbjct: 54  LALATAALAGIIVVLQSGIYVQRFGARAFLGWAAGYGVLWEFGPLLLGLIMSARLGARNA 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AE+  M++  +I+ +R +GLD   IL++PR+ A+ +S+  L+ +    AI+  S+     
Sbjct: 114 AELALMQVGGQIEGLRGIGLDPFAILVAPRVVAMEVSMLALSGVTFAVAILFESVAALLA 173

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
             +P  VFF  F       ++  G++K      AI +++   G +    ++++G+     
Sbjct: 174 LGLPVRVFFGTFSQLLGPLDLLGGVVKTGIFGLAIALLSTTVGLSARGGAHAVGQAAANA 233

Query: 350 VVQSISIVIIIDSLFAIFYFA 370
           VV+S + + ++D         
Sbjct: 234 VVRSCAAIFVLDFALTSLLAG 254


>gi|215414033|ref|ZP_03422692.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis
           94_M4241A]
          Length = 298

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 52/256 (20%), Positives = 106/256 (41%), Gaps = 10/256 (3%)

Query: 84  LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFC 143
           +        +      R+ F  +  NL    G    + ++++          +++ G+  
Sbjct: 1   MCDSGRGADMSTAAVLRARFPRAVANL-RQYGVAAARGLDEAGQLTWF---ALTSIGQIA 56

Query: 144 ASSYKFKGFLLSLIRQM------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
            +   ++   L LI Q+        V    V +V  ++    +++A QG   L   G E 
Sbjct: 57  HALRYYRKETLRLIAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEA 116

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
           F+    +++ +R  G ++T V +A   G+   AE+G+M+I+EEIDA+  MG+  +  L S
Sbjct: 117 FTGFFAALINVRIAGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLAS 176

Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
            RI A ++ +  L  LA   + +   I     Y      +   F +     ++F   ++A
Sbjct: 177 TRIMAGLVVIIPLYALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEA 236

Query: 318 PFMACAIGIVAMKEGF 333
             +   + +     G+
Sbjct: 237 LIITAIVMVSHCYYGY 252


>gi|296165592|ref|ZP_06848117.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295899065|gb|EFG78546.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 318

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 50/261 (19%), Positives = 107/261 (40%), Gaps = 8/261 (3%)

Query: 89  HRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS--------QAHILGLVISNTG 140
           HR  +           + ++ +    G  + K  +   +            + +  +   
Sbjct: 22  HRGALHRAPFGNGAAPDGWRAVLTQPGASVAKAASRVGAIPARSTATTGRAVLMAAAVLR 81

Query: 141 EFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSI 200
                +   +  +  LI Q + +        +L++   GA+IA Q +  +++ GA     
Sbjct: 82  YAVLDTISMRLPVGELIVQAWTLLKVTAVPAVLMAVPFGAMIAVQVSGLVNEVGANSLIG 141

Query: 201 DLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRI 260
             + +  +R+   +   +++ G + SAI A+ G+  I EE+DA+RT+G+D V+ L+ PR 
Sbjct: 142 SAIGVGVVRQGAPMTAGLLMGGAAASAIAADFGARAIREELDALRTLGIDPVQRLVVPRF 201

Query: 261 WALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320
            AL++  P+L  +   S +  A  +     D+    F+  F S A + +++  + K    
Sbjct: 202 LALVLIAPILCTIVIASGVAAAFTISVTVNDVTPGSFWLSFGSFAKMVDVWFAMGKTVTF 261

Query: 321 ACAIGIVAMKEGFAVGVHSNS 341
           A  + I++   G         
Sbjct: 262 AAFVAIISSMRGMEAKGGPRG 282


>gi|262203810|ref|YP_003275018.1| hypothetical protein Gbro_3951 [Gordonia bronchialis DSM 43247]
 gi|262087157|gb|ACY23125.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247]
          Length = 283

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 46/212 (21%), Positives = 93/212 (43%), Gaps = 9/212 (4%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---------VPVVILISFVTGAVIAQ 184
             +       A     + +    +R +  + +           V VV  ++  TG  IA 
Sbjct: 29  QALFYWDSIVAIPRALRLYKKETLRLIAEISMGTGALAMIGGTVVVVGFLTLFTGGTIAV 88

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+  G E  +    + + +R    +++ + +A   G+   A++G+M+++EEIDA+
Sbjct: 89  QGYSSLANIGVEALTGFFSAFINVRIAVPVISGIALAATIGAGATAQLGAMRVSEEIDAL 148

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            TM +  +  L+S RI A +I++  L  LA+ ++ + +       Y     V+   F + 
Sbjct: 149 ETMAISSIPYLVSTRIVAGLIAIIPLYALASLASFLASRFATVFIYGQSPGVYDHYFDTF 208

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
              ++I    ++A  MA A+ ++    GF   
Sbjct: 209 LIPSDILWSFVQAICMAVAVMLIHTYYGFNAS 240


>gi|289572748|ref|ZP_06452975.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis K85]
 gi|289537179|gb|EFD41757.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis K85]
          Length = 289

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 52/240 (21%), Positives = 104/240 (43%), Gaps = 10/240 (4%)

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
           R+ F  +  NL    G    + ++++          +++ G+   +   ++   L LI Q
Sbjct: 8   RARFPRAVANL-RQYGGAAARGLDEAGQLTWF---ALTSIGQIAHALRYYRKETLRLIAQ 63

Query: 160 M------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
           +        V    V +V  ++    +++A QG   L   G E F+    +++ +R  G 
Sbjct: 64  IGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGP 123

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           ++T V +A   G+   AE+G+M+I+EEIDA+  MG+  +  L S RI A ++ +  L  L
Sbjct: 124 VVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYAL 183

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
           A   + +   I     Y      +   F +     ++F   ++A  +   + +     G+
Sbjct: 184 AMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPEDVFWSFLEALIITAIVMVSHCYYGY 243


>gi|15607309|ref|NP_214682.1| integral membrane protein YRBE1B [Mycobacterium tuberculosis H37Rv]
 gi|31791346|ref|NP_853839.1| integral membrane protein YRBE1B [Mycobacterium bovis AF2122/97]
 gi|121636080|ref|YP_976303.1| integral membrane protein YrbE1b [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148659932|ref|YP_001281455.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis H37Ra]
 gi|148821360|ref|YP_001286114.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis F11]
 gi|224988553|ref|YP_002643240.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253797090|ref|YP_003030091.1| hypothetical protein TBMG_00169 [Mycobacterium tuberculosis KZN
           1435]
 gi|254233557|ref|ZP_04926883.1| hypothetical integral membrane protein yrbE1B [Mycobacterium
           tuberculosis C]
 gi|254366620|ref|ZP_04982664.1| hypothetical integral membrane protein yrbE1B [Mycobacterium
           tuberculosis str. Haarlem]
 gi|289441543|ref|ZP_06431287.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           T46]
 gi|289445699|ref|ZP_06435443.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           CPHL_A]
 gi|289552420|ref|ZP_06441630.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           KZN 605]
 gi|289568067|ref|ZP_06448294.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           T17]
 gi|289747935|ref|ZP_06507313.1| hypothetical integral membrane protein yrbE1B [Mycobacterium
           tuberculosis 02_1987]
 gi|289748644|ref|ZP_06508022.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           T92]
 gi|289756233|ref|ZP_06515611.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
 gi|289760270|ref|ZP_06519648.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|289764284|ref|ZP_06523662.1| hypothetical integral membrane protein yrbE1B [Mycobacterium
           tuberculosis GM 1503]
 gi|306774258|ref|ZP_07412595.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu001]
 gi|306782790|ref|ZP_07421112.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu003]
 gi|306801753|ref|ZP_07438421.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu008]
 gi|307082301|ref|ZP_07491471.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu011]
 gi|308369322|ref|ZP_07417339.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu002]
 gi|308371608|ref|ZP_07425479.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu004]
 gi|308372825|ref|ZP_07430015.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu005]
 gi|308373908|ref|ZP_07434059.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu006]
 gi|308375089|ref|ZP_07442632.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu007]
 gi|308378565|ref|ZP_07483021.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu009]
 gi|308379713|ref|ZP_07487253.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu010]
 gi|308394823|ref|ZP_07491759.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu012]
 gi|2213505|emb|CAB09751.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE1B
           [Mycobacterium tuberculosis H37Rv]
 gi|31616931|emb|CAD93038.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE1B
           [Mycobacterium bovis AF2122/97]
 gi|121491727|emb|CAL70189.1| Conserved hypothetical integral membrane protein yrbE1B
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124603350|gb|EAY61625.1| hypothetical integral membrane protein yrbE1B [Mycobacterium
           tuberculosis C]
 gi|134152132|gb|EBA44177.1| hypothetical integral membrane protein yrbE1B [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148504084|gb|ABQ71893.1| conserved hypothetical integral membrane protein YrbE1b
           [Mycobacterium tuberculosis H37Ra]
 gi|148719887|gb|ABR04512.1| hypothetical integral membrane protein yrbE1B [Mycobacterium
           tuberculosis F11]
 gi|224771666|dbj|BAH24472.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253318593|gb|ACT23196.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           KZN 1435]
 gi|289414462|gb|EFD11702.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           T46]
 gi|289418657|gb|EFD15858.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           CPHL_A]
 gi|289437052|gb|EFD19545.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           KZN 605]
 gi|289541820|gb|EFD45469.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           T17]
 gi|289688463|gb|EFD55951.1| hypothetical integral membrane protein yrbE1B [Mycobacterium
           tuberculosis 02_1987]
 gi|289689231|gb|EFD56660.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           T92]
 gi|289696820|gb|EFD64249.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
 gi|289711790|gb|EFD75806.1| hypothetical integral membrane protein yrbE1B [Mycobacterium
           tuberculosis GM 1503]
 gi|289715834|gb|EFD79846.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|308217092|gb|EFO76491.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu001]
 gi|308328030|gb|EFP16881.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu002]
 gi|308332310|gb|EFP21161.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu003]
 gi|308336192|gb|EFP25043.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu004]
 gi|308339692|gb|EFP28543.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu005]
 gi|308343699|gb|EFP32550.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu006]
 gi|308347572|gb|EFP36423.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu007]
 gi|308351471|gb|EFP40322.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu008]
 gi|308352198|gb|EFP41049.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu009]
 gi|308356147|gb|EFP44998.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu010]
 gi|308360102|gb|EFP48953.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu011]
 gi|308367650|gb|EFP56501.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu012]
 gi|323717157|gb|EGB26366.1| hypothetical protein TMMG_00597 [Mycobacterium tuberculosis
           CDC1551A]
 gi|326905925|gb|EGE52858.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           W-148]
 gi|328456877|gb|AEB02300.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           KZN 4207]
 gi|328864230|gb|AEB53198.1| conserved integral membrane protein YRBE1B [Mycobacterium
           tuberculosis]
          Length = 289

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 52/240 (21%), Positives = 104/240 (43%), Gaps = 10/240 (4%)

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
           R+ F  +  NL    G    + ++++          +++ G+   +   ++   L LI Q
Sbjct: 8   RARFPRAVANL-RQYGGAAARGLDEAGQLTWF---ALTSIGQIAHALRYYRKETLRLIAQ 63

Query: 160 M------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
           +        V    V +V  ++    +++A QG   L   G E F+    +++ +R  G 
Sbjct: 64  IGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGP 123

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           ++T V +A   G+   AE+G+M+I+EEIDA+  MG+  +  L S RI A ++ +  L  L
Sbjct: 124 VVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYAL 183

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
           A   + +   I     Y      +   F +     ++F   ++A  +   + +     G+
Sbjct: 184 AMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYYGY 243


>gi|251773083|gb|EES53637.1| probable ABC transporter, permease [Leptospirillum
           ferrodiazotrophum]
          Length = 146

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 66/138 (47%)

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           E+G M   ++I+A+  MG+D V  L++P+I A ++ LP+L+++ +F  ++    V     
Sbjct: 1   ELGMMSTTQQIEALLVMGVDPVDRLVAPKILAGMVMLPVLSVVGDFLGVLAGLAVAMFGA 60

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
            +   +++S   +  T  N+  G++K       +  +    G      +  +G+  T  V
Sbjct: 61  HVAAPLYWSGVRTALTPPNLVNGIVKPFVFGFILVSIGCFYGLRTTGGAQGVGRATTKAV 120

Query: 351 VQSISIVIIIDSLFAIFY 368
           V +   ++I + L +   
Sbjct: 121 VYAAIWILIANFLISKLL 138


>gi|168702230|ref|ZP_02734507.1| hypothetical protein GobsU_22062 [Gemmata obscuriglobus UQM 2246]
          Length = 256

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 51/231 (22%), Positives = 103/231 (44%), Gaps = 2/231 (0%)

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
           ++ +    LG + + T     +S+         +R  Y V + G+P+ ++     G VI 
Sbjct: 3   EAINFLERLGRLAAFTPRAVLASFTTLRRSGLWLRPFYSVTIGGLPLALVTGLALGVVIW 62

Query: 184 QQGAFQLSQFG--AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
                 L++ G  A  +    ++   L E+  +   +++A R+G+++ AE+ SM+++E+I
Sbjct: 63  MHTRDVLARTGTGAVEYLPTFLAAAVLLELAPVGAGLIVAARTGASLGAELASMRVSEQI 122

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  +G+  +R L+ PRI A + + PLL +L   +A+    I         F  + +  
Sbjct: 123 DAMELLGVSTIRALVGPRIVACVFAAPLLHVLIAATALGSGFIAELATGSTTFLKYNTAA 182

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
                L ++    +K       +G+     G +    S  +G+  T  VV 
Sbjct: 183 VRELVLQDVIPAGLKTLVFGLIVGVTGCFAGLSAREGSEGVGRAATDSVVA 233


>gi|298527560|ref|ZP_07014969.1| YrbE1B-HA [Mycobacterium tuberculosis 94_M4241A]
 gi|298497354|gb|EFI32648.1| YrbE1B-HA [Mycobacterium tuberculosis 94_M4241A]
          Length = 289

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 52/240 (21%), Positives = 104/240 (43%), Gaps = 10/240 (4%)

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
           R+ F  +  NL    G    + ++++          +++ G+   +   ++   L LI Q
Sbjct: 8   RARFPRAVANL-RQYGVAAARGLDEAGQLTWF---ALTSIGQIAHALRYYRKETLRLIAQ 63

Query: 160 M------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
           +        V    V +V  ++    +++A QG   L   G E F+    +++ +R  G 
Sbjct: 64  IGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGP 123

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           ++T V +A   G+   AE+G+M+I+EEIDA+  MG+  +  L S RI A ++ +  L  L
Sbjct: 124 VVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYAL 183

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
           A   + +   I     Y      +   F +     ++F   ++A  +   + +     G+
Sbjct: 184 AMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYYGY 243


>gi|120401935|ref|YP_951764.1| hypothetical protein Mvan_0920 [Mycobacterium vanbaalenii PYR-1]
 gi|119954753|gb|ABM11758.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 255

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 52/251 (20%), Positives = 103/251 (41%), Gaps = 4/251 (1%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
               F     +        +          + ++ F    I QM++V    +   +++S 
Sbjct: 3   ATESFARPMRAVGGFFATAVDTAVLAPQPPFAWREF----IFQMWFVARVSIFPTVMLSI 58

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
               +        L +FGA  FS    +   + +IG L+T +++AG + +A+ A++G+  
Sbjct: 59  PFTVLSVFIFNILLVEFGAADFSGAGAAFGAVTQIGPLVTVLVVAGAAATAMCADLGART 118

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           I EE+DA+R MG++ ++ L+ PR+ A ++   LL  + +   ++G          +    
Sbjct: 119 IREELDAMRVMGINPLQALVVPRVLATVVVALLLNSVVSVVGVVGGFFFSVFVQHVTPGA 178

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           F +       L  I   L KA        ++   +G +VG     +G  V   VV S   
Sbjct: 179 FVAGMTLFTGLPEIIISLTKASLFGLVAALIGCYKGISVGGGPVGVGTAVNETVVFSFMA 238

Query: 357 VIIIDSLFAIF 367
           + +I+ +    
Sbjct: 239 LFVINVVVTAV 249


>gi|41410181|ref|NP_963017.1| hypothetical protein MAP4083 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41399015|gb|AAS06633.1| hypothetical protein MAP_4083 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 292

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 51/255 (20%), Positives = 95/255 (37%), Gaps = 9/255 (3%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
              Y          G   V+ +      A    + I  TG        ++   L L+ ++
Sbjct: 11  RARYPRTAANLDRYGGGTVRRLWQIGIFARFARISIGQTGWALRH---YRRETLRLVAEI 67

Query: 161 ------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
                   V    V ++  ++   G++IA QG   L   G E F+    ++   R    +
Sbjct: 68  GMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRIAAPI 127

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +  V +A   G+   A++G+M+I+EEIDA+  MG+  +  L+S RI   +  +  L  LA
Sbjct: 128 VAGVTLAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLAVIVPLYALA 187

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
              A     +V   +Y      +   F +     ++   + +   +A  + I     G+ 
Sbjct: 188 LDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVFEVVIIAVVVMITHCYYGYT 247

Query: 335 VGVHSNSLGKKVTTC 349
                  +G  V   
Sbjct: 248 ASGGPVGVGHAVGRS 262


>gi|118467306|ref|YP_883683.1| hypothetical protein MAV_4552 [Mycobacterium avium 104]
 gi|118168593|gb|ABK69490.1| conserved hypothetical protein [Mycobacterium avium 104]
          Length = 292

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 50/255 (19%), Positives = 94/255 (36%), Gaps = 9/255 (3%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
              Y          G   V+ +      A    + I   G        ++   L L+ ++
Sbjct: 11  RARYPRTAANLDRYGGGTVRRLWQIGIFARFARISIGQIGWALRH---YRRETLRLVAEI 67

Query: 161 ------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
                   V    V ++  ++   G++IA QG   L   G E F+    ++   R    +
Sbjct: 68  GMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRIAAPI 127

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +  V +A   G+   A++G+M+I+EEIDA+  MG+  +  L+S RI   +  +  L  LA
Sbjct: 128 VAGVTLAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLAVIVPLYALA 187

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
              A     +V   +Y      +   F +     ++   + +   +A  + I     G+ 
Sbjct: 188 LDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVFEVVIIAVVVMITHCYYGYT 247

Query: 335 VGVHSNSLGKKVTTC 349
                  +G  V   
Sbjct: 248 ASGGPVGVGHAVGRS 262


>gi|254458766|ref|ZP_05072190.1| ABC transporter permease protein [Campylobacterales bacterium GD 1]
 gi|207084532|gb|EDZ61820.1| ABC transporter permease protein [Campylobacterales bacterium GD 1]
          Length = 262

 Score =  129 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 47/265 (17%), Positives = 108/265 (40%), Gaps = 4/265 (1%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
                  IG K +  ++          L + +  +  + +   +  L    +Q+Y+  V 
Sbjct: 2   VLRFIEGIGDKTISMMSSFYEALRFTSLCLLHMIQPSSYNPAMRMVLT---KQIYFTTVQ 58

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +P+ + ++ + G+VI        +Q+  +     ++    + E     TA++I+ RSG+
Sbjct: 59  IIPLFMTMAILFGSVIIGVVIALATQYNLQDEIGSIIITFVIDEFSPFFTALLISLRSGA 118

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+  EI  M +N+E++ +    +D +  L  PRI + +IS   L+IL     +    I  
Sbjct: 119 AVNTEIAVMNVNKELNTLEKYKIDLIDYLFLPRIISGMISAVSLSILFAVIMLSSGYIFT 178

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
             Y ++ F  +     S     ++   LIK+        ++ +  G        ++   V
Sbjct: 179 LFYMNMDFHTYKYILISAIEFKDLVVLLIKSMAFGFVTMLIPIYSGLKTTSAYTAIPVSV 238

Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371
              +V+    +  I+ + ++   ++
Sbjct: 239 LNGMVKLFIALFFIE-VLSLLLQSL 262


>gi|296163927|ref|ZP_06846563.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295900708|gb|EFG80078.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 283

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 112/263 (42%), Gaps = 20/263 (7%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---------VPV 170
           + ++ S   A  +G V+   G      +  K +   ++R +  +G+           V +
Sbjct: 21  RALDASGDVALFVGEVLRYLG------FTLKNYRKEVLRLIAEIGMGTGAMAAVGGTVAI 74

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           +  ++   G++IA QG   L   G E F+    ++  +R +  ++T   +A   G+   A
Sbjct: 75  IGFVTLSAGSLIAIQGFASLGNIGVEAFTGFFAALANVRVVAPIVTGTALAATVGAGATA 134

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           ++G+M+I+EEIDA+  MG+  V  L+S R+    I    L  +A   +   A +V   +Y
Sbjct: 135 QLGAMRISEEIDALEVMGIKSVSYLVSTRVIGAFIVTIPLYSVAVLLSFFSAQLVTTLFY 194

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
                 +   F++   + + +  L +   ++  + +     G+        +G  V   +
Sbjct: 195 AQSIGTYDHYFNTFLRVNDFWYSLAETVAISAVVMLNHCYYGYNASGGPVGVGVAVGRSM 254

Query: 351 VQSISIVIIIDSLFAIFYFAIGI 373
             S+  ++++     +   ++ I
Sbjct: 255 RASLIAIVMV-----VLMASLAI 272


>gi|254776984|ref|ZP_05218500.1| hypothetical protein MaviaA2_20266 [Mycobacterium avium subsp.
           avium ATCC 25291]
          Length = 292

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 50/255 (19%), Positives = 94/255 (36%), Gaps = 9/255 (3%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
              Y          G   V+ +      A    + I   G        ++   L L+ ++
Sbjct: 11  RARYPRTAANLDRYGGGTVRRLWQIGVFARFARVSIGQIGWALRH---YRRETLRLVAEI 67

Query: 161 ------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
                   V    V ++  ++   G++IA QG   L   G E F+    ++   R    +
Sbjct: 68  GMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRIAAPI 127

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +  V +A   G+   A++G+M+I+EEIDA+  MG+  +  L+S RI   +  +  L  LA
Sbjct: 128 VAGVTLAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLAVIVPLYALA 187

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
              A     +V   +Y      +   F +     ++   + +   +A  + I     G+ 
Sbjct: 188 LDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWAVFEVVIIAVVVMITHCYYGYT 247

Query: 335 VGVHSNSLGKKVTTC 349
                  +G  V   
Sbjct: 248 ASGGPVGVGHAVGRS 262


>gi|319951382|ref|ZP_08025207.1| YrbE family protein [Dietzia cinnamea P4]
 gi|319434979|gb|EFV90274.1| YrbE family protein [Dietzia cinnamea P4]
          Length = 187

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 80/174 (45%)

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
            G E  +    + + +R    ++  + +A   G+   A++G+M+++EEIDA+  M +D +
Sbjct: 1   MGVEALTGFFAAFINVRIAAPVIAGIGLAATIGAGATAQLGAMRVSEEIDALEVMAIDSI 60

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
             L+S RI A +I++  L  LA  ++ + +     + Y     V+   F +     +I  
Sbjct: 61  TYLVSTRIVAGMIAVVPLYSLAVIASFLASRFATVEIYGQSGGVYDHYFSTFLIPTDILW 120

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
             ++A  MA  I ++    G+        +G  V   V  S+  V+ +  L ++
Sbjct: 121 SFVQAIAMAITIMLIHTYYGYNAAGGPAGVGSAVGNAVRTSLIAVVTVTLLVSL 174


>gi|215444701|ref|ZP_03431453.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis T85]
 gi|294996100|ref|ZP_06801791.1| hypothetical protein Mtub2_16770 [Mycobacterium tuberculosis 210]
          Length = 246

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 90/212 (42%), Gaps = 9/212 (4%)

Query: 147 YKFKGFLLSLIRQMYYVGVSG---------VPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
           +  + +    +R +  +G+           V ++  ++   G++IA QG   L   G E 
Sbjct: 5   WALRRYRRETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVET 64

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
           F+    ++   R    +++ V +A   G+   A++G+M+I+EEIDA+  MG+  +  L+S
Sbjct: 65  FTGFFAALANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVS 124

Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
            RI   ++ +  L  LA   A     +V   +Y      +   F +     ++   +++ 
Sbjct: 125 TRILGGLVVIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEV 184

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
             +A  + I     G+        +G+ V   
Sbjct: 185 VIIAVVVMITHCYYGYTASGGPVGVGQAVGRS 216


>gi|167969011|ref|ZP_02551288.1| hypothetical integral membrane protein yrbE2B [Mycobacterium
           tuberculosis H37Ra]
 gi|215402356|ref|ZP_03414537.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis
           02_1987]
 gi|215410129|ref|ZP_03418937.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis
           94_M4241A]
 gi|215425820|ref|ZP_03423739.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis T92]
 gi|215429421|ref|ZP_03427340.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis
           EAS054]
 gi|218752228|ref|ZP_03531024.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis GM
           1503]
 gi|219556430|ref|ZP_03535506.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis T17]
 gi|254549543|ref|ZP_05139990.1| hypothetical protein Mtube_03620 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260185465|ref|ZP_05762939.1| hypothetical protein MtubCP_05439 [Mycobacterium tuberculosis
           CPHL_A]
 gi|260199593|ref|ZP_05767084.1| hypothetical protein MtubT4_05539 [Mycobacterium tuberculosis T46]
 gi|260203752|ref|ZP_05771243.1| hypothetical protein MtubK8_05504 [Mycobacterium tuberculosis K85]
 gi|297633082|ref|ZP_06950862.1| hypothetical protein MtubK4_03110 [Mycobacterium tuberculosis KZN
           4207]
 gi|297730060|ref|ZP_06959178.1| hypothetical protein MtubKR_03155 [Mycobacterium tuberculosis KZN
           R506]
 gi|313657387|ref|ZP_07814267.1| hypothetical protein MtubKV_03145 [Mycobacterium tuberculosis KZN
           V2475]
          Length = 246

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 90/212 (42%), Gaps = 9/212 (4%)

Query: 147 YKFKGFLLSLIRQMYYVGVSG---------VPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
           +  + +    +R +  +G+           V ++  ++   G++IA QG   L   G E 
Sbjct: 5   WALRRYRRETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEA 64

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
           F+    ++   R    +++ V +A   G+   A++G+M+I+EEIDA+  MG+  +  L+S
Sbjct: 65  FTGFFAALANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVS 124

Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
            RI   ++ +  L  LA   A     +V   +Y      +   F +     ++   +++ 
Sbjct: 125 TRILGGLVVIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEV 184

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
             +A  + I     G+        +G+ V   
Sbjct: 185 VIIAVVVMITHCYYGYTASGGPVGVGQAVGRS 216


>gi|31747666|gb|AAO38315.1| Lfe134p2 [Leptospirillum ferrooxidans]
          Length = 138

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 34/138 (24%), Positives = 69/138 (50%)

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           +G+M++ E+IDA  ++ ++    L++PR++A + +LPLLT LA+   I G   V      
Sbjct: 1   LGTMRVTEQIDAFTSLAVNPQTYLMTPRVFAGLTALPLLTALADLVGIAGGYFVAVILLG 60

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
           +P   +         L + ++GL+K+      + +++   GF     +  +G+ VT  VV
Sbjct: 61  LPHNSYVRGIAEYVNLHDFYSGLVKSAVFGGLLSLLSCHMGFYASGGAAGVGRSVTVAVV 120

Query: 352 QSISIVIIIDSLFAIFYF 369
            S   +++ D     + +
Sbjct: 121 ASSMAILVSDYFLTSWLY 138


>gi|270595146|ref|ZP_06221505.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
 gi|270318343|gb|EFA29500.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
          Length = 133

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 46/132 (34%), Positives = 78/132 (59%)

Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198
                    + +     L++QM+ +GV  + +++L     G V+  QG   L  F AE  
Sbjct: 2   LFGALIGKPQIRKHFPLLVKQMHVLGVQSLLIILLSGLFIGMVLGLQGYVVLVDFSAETS 61

Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258
              L+++  LRE+G ++TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+P
Sbjct: 62  JGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAP 121

Query: 259 RIWALIISLPLL 270
           R WA +IS+P+L
Sbjct: 122 RFWAGVISMPIL 133


>gi|85860837|ref|YP_463039.1| ABC transporter permease [Syntrophus aciditrophicus SB]
 gi|85723928|gb|ABC78871.1| ABC transporter permease protein [Syntrophus aciditrophicus SB]
          Length = 269

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 53/271 (19%), Positives = 109/271 (40%), Gaps = 4/271 (1%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
            F   S       IG K +       +        I +  +    +   K     ++ Q+
Sbjct: 3   PFGRKSMVTFIEGIGTKALVVARSVINTLFFAWRAIVHLADRKTYNNATKMV---IVTQL 59

Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
           Y+  V  +P+ I IS + G  +       +   G   +  +++    + E+   +T +M+
Sbjct: 60  YFTAVQILPLFISISVILGLFLMGIVFESIKNLGMTGYLGNILMGFIVTELCPFMTVLML 119

Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280
           A RSG+AI  EI  MK+N+E DA+    +D    +  PRI   ++S+ LL  +     + 
Sbjct: 120 ALRSGAAINTEIAVMKVNKEFDALSVFNIDIFDYIYVPRILNGVVSVVLLNGVFTLVLLT 179

Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
             +I     + I    + S   ++A   ++   L+K       I ++ ++ G        
Sbjct: 180 SGAIFSRVIFGIGMDAYISILITSAEFPDLVILLLKCATFGFFITLLPIRYGLTASNELT 239

Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           S+   V   ++     ++II+ + ++   +I
Sbjct: 240 SIPIAVLNGMINVFIAIVIIE-VISLILSSI 269


>gi|326383098|ref|ZP_08204787.1| hypothetical protein SCNU_09176 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326198234|gb|EGD55419.1| hypothetical protein SCNU_09176 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 283

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 90/212 (42%), Gaps = 9/212 (4%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---------VPVVILISFVTGAVIAQ 184
             +       +     + +    +R +  + +           V VV  ++  TG  IA 
Sbjct: 29  QALFYWDAIASIPRAIRLYKKETLRLIAEISMGTGALAMIGGTVVVVGFLTLFTGGTIAV 88

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+  G E  +    + + +R    ++  + +A   G+   A++G+M+++EEIDA+
Sbjct: 89  QGYSSLANIGVEALTGFFSAFINVRIAVPVIAGIALAATIGAGATAQLGAMRVSEEIDAL 148

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +  V  L+S RI A ++++  L  LA  ++ + +       Y     V+   F + 
Sbjct: 149 EVMAISSVPYLVSTRIVAGLVAIIPLYSLAALASFLASRFATVVLYGQSSGVYDHYFSTF 208

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
              ++I    ++A  MA A+ ++    GF   
Sbjct: 209 LIPSDILWSFVQAICMAVAVMLIHTYYGFNAS 240


>gi|213027514|ref|ZP_03341961.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. 404ty]
          Length = 152

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 44/148 (29%), Positives = 76/148 (51%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++I+   
Sbjct: 5   ALAALGHSGIKTVRTFGRAGLMLFNAIIGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGV 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALI 264
             E++ ++  M +D +R +ISPR WA +
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGV 152


>gi|291279860|ref|YP_003496695.1| ABC transporter permease [Deferribacter desulfuricans SSM1]
 gi|290754562|dbj|BAI80939.1| ABC transporter, permease [Deferribacter desulfuricans SSM1]
          Length = 258

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 52/230 (22%), Positives = 101/230 (43%), Gaps = 3/230 (1%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
            KN    +G  +V F     +       ++ +  +F   +   K      +RQ+Y+ GV 
Sbjct: 1   MKNFIESLGSYVVGFFLFLQNYIIFSLQILKSLFKFNLFN---KAIFSVYLRQVYFTGVQ 57

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +P+ I IS + G  +    +  L   G       L+ +L +RE+G L+T ++++ RS +
Sbjct: 58  ILPIYIFISLIFGIALVGILSKLLIDLGIYNELGKLLVLLIVRELGPLVTVILLSLRSST 117

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEI  MK++ EI+ +    +D +  L  PR+ A +  +  L+I  +F +I G  ++I
Sbjct: 118 AVGAEISVMKLSGEIETLTFFEIDPLIYLFLPRVLAGLTCMVSLSIFFSFVSITGGYLLI 177

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
                I F           ++++I     K       +  + +    +V 
Sbjct: 178 SFKLGITFDYLMKLIFDYISISDIAAFFYKTIMFGFFLMSIPIFSALSVK 227


>gi|260426504|ref|ZP_05780483.1| membrane protein [Citreicella sp. SE45]
 gi|260420996|gb|EEX14247.1| membrane protein [Citreicella sp. SE45]
          Length = 137

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 59/137 (43%)

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           MK+ E+IDA+ T+  + ++ L++PR+ A ++ +PLL  + +   I G   V         
Sbjct: 1   MKVTEQIDALVTLSTNPMKYLVAPRLLAGLVVVPLLVGVGDVIGIFGGWFVATSSLGFNP 60

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
           A +           ++ + L+K         ++    G   G  +  +G+     V  + 
Sbjct: 61  AAYLKNTLDFLEPLDVISSLVKGCAFGGIAALMGCYHGMHSGRGAQGVGRATKGSVEAAA 120

Query: 355 SIVIIIDSLFAIFYFAI 371
            +++  + L    +F+I
Sbjct: 121 VLILAANFLLTGVFFSI 137


>gi|260188552|ref|ZP_05766026.1| hypothetical protein MtubCP_21372 [Mycobacterium tuberculosis
           CPHL_A]
 gi|289449202|ref|ZP_06438946.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           CPHL_A]
 gi|289422160|gb|EFD19361.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           CPHL_A]
          Length = 280

 Score =  122 bits (306), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 52/262 (19%), Positives = 114/262 (43%), Gaps = 9/262 (3%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VG 164
                 ++ + +++   QA   G  +           +++   + L+ +M        + 
Sbjct: 9   FRRFFSRLQRPVDNFGEQALFYGETMRYVPNAIT---RYRKETVRLVAEMTLGAGALVMI 65

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
              V V   ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   
Sbjct: 66  GGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATI 125

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           G+   A++G+M+++EEIDA+  M +  V  L+S R+ A ++++  L  L+  +A   A  
Sbjct: 126 GAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARF 185

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
                      ++   F++    +++    ++A  M+ A+ +V    G+     S  +G 
Sbjct: 186 TTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVGV 245

Query: 345 KVTTCVVQSISIVIIIDSLFAI 366
            V   V  S+ +V++I    ++
Sbjct: 246 AVGQAVRTSLIVVVVITLFISL 267


>gi|15610636|ref|NP_218017.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis H37Rv]
 gi|15843112|ref|NP_338149.1| hypothetical protein MT3604 [Mycobacterium tuberculosis CDC1551]
 gi|31794676|ref|NP_857169.1| integral membrane protein YrbE4b [Mycobacterium bovis AF2122/97]
 gi|121639419|ref|YP_979643.1| integral membrane protein YrbE4b [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148663364|ref|YP_001284887.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis H37Ra]
 gi|148824707|ref|YP_001289461.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis F11]
 gi|215405541|ref|ZP_03417722.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis
           02_1987]
 gi|215413413|ref|ZP_03422097.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis
           94_M4241A]
 gi|215429006|ref|ZP_03426925.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis T92]
 gi|215432468|ref|ZP_03430387.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis
           EAS054]
 gi|215447833|ref|ZP_03434585.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis T85]
 gi|218755277|ref|ZP_03534073.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis GM
           1503]
 gi|224991915|ref|YP_002646604.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253800542|ref|YP_003033543.1| hypothetical protein TBMG_03545 [Mycobacterium tuberculosis KZN
           1435]
 gi|254234086|ref|ZP_04927411.1| hypothetical integral membrane protein yrbE4B [Mycobacterium
           tuberculosis C]
 gi|254366846|ref|ZP_04982887.1| hypothetical integral membrane protein yrbE4B [Mycobacterium
           tuberculosis str. Haarlem]
 gi|254552602|ref|ZP_05143049.1| hypothetical protein Mtube_19500 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260206867|ref|ZP_05774358.1| hypothetical protein MtubK8_21501 [Mycobacterium tuberculosis K85]
 gi|289555766|ref|ZP_06444976.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           KZN 605]
 gi|289576234|ref|ZP_06456461.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis K85]
 gi|289747336|ref|ZP_06506714.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis
           02_1987]
 gi|289752221|ref|ZP_06511599.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           T92]
 gi|289755630|ref|ZP_06515008.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
 gi|289759659|ref|ZP_06519037.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|289763680|ref|ZP_06523058.1| hypothetical integral membrane protein yrbE4B [Mycobacterium
           tuberculosis GM 1503]
 gi|294995730|ref|ZP_06801421.1| hypothetical protein Mtub2_14798 [Mycobacterium tuberculosis 210]
 gi|297636156|ref|ZP_06953936.1| hypothetical protein MtubK4_18620 [Mycobacterium tuberculosis KZN
           4207]
 gi|297733156|ref|ZP_06962274.1| hypothetical protein MtubKR_18790 [Mycobacterium tuberculosis KZN
           R506]
 gi|298526980|ref|ZP_07014389.1| ABC-transporter integral membrane protein [Mycobacterium
           tuberculosis 94_M4241A]
 gi|306777850|ref|ZP_07416187.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu001]
 gi|306782581|ref|ZP_07420918.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu002]
 gi|306786399|ref|ZP_07424721.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu003]
 gi|306790768|ref|ZP_07429090.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu004]
 gi|306795298|ref|ZP_07433600.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu005]
 gi|306799486|ref|ZP_07437788.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu006]
 gi|306805332|ref|ZP_07442000.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu008]
 gi|306809518|ref|ZP_07446186.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu007]
 gi|306969625|ref|ZP_07482286.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu009]
 gi|306973968|ref|ZP_07486629.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu010]
 gi|307081676|ref|ZP_07490846.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu011]
 gi|307086284|ref|ZP_07495397.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu012]
 gi|313660487|ref|ZP_07817367.1| hypothetical protein MtubKV_18785 [Mycobacterium tuberculosis KZN
           V2475]
 gi|2924437|emb|CAA17737.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE4B
           [Mycobacterium tuberculosis H37Rv]
 gi|13883458|gb|AAK47963.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|31620273|emb|CAD95716.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE4B
           [Mycobacterium bovis AF2122/97]
 gi|121495067|emb|CAL73553.1| Conserved hypothetical integral membrane protein yrbE4B
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124599615|gb|EAY58719.1| hypothetical integral membrane protein yrbE4B [Mycobacterium
           tuberculosis C]
 gi|134152355|gb|EBA44400.1| hypothetical integral membrane protein yrbE4B [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148507516|gb|ABQ75325.1| conserved hypothetical integral membrane protein YrbE4b
           [Mycobacterium tuberculosis H37Ra]
 gi|148723234|gb|ABR07859.1| hypothetical integral membrane protein yrbE4B [Mycobacterium
           tuberculosis F11]
 gi|224775030|dbj|BAH27836.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253322045|gb|ACT26648.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           KZN 1435]
 gi|289440398|gb|EFD22891.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           KZN 605]
 gi|289540665|gb|EFD45243.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis K85]
 gi|289687864|gb|EFD55352.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis
           02_1987]
 gi|289692808|gb|EFD60237.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           T92]
 gi|289696217|gb|EFD63646.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
 gi|289711186|gb|EFD75202.1| hypothetical integral membrane protein yrbE4B [Mycobacterium
           tuberculosis GM 1503]
 gi|289715223|gb|EFD79235.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|298496774|gb|EFI32068.1| ABC-transporter integral membrane protein [Mycobacterium
           tuberculosis 94_M4241A]
 gi|308213830|gb|EFO73229.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu001]
 gi|308324771|gb|EFP13622.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu002]
 gi|308329035|gb|EFP17886.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu003]
 gi|308332874|gb|EFP21725.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu004]
 gi|308336457|gb|EFP25308.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu005]
 gi|308340335|gb|EFP29186.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu006]
 gi|308344190|gb|EFP33041.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu007]
 gi|308348120|gb|EFP36971.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu008]
 gi|308352884|gb|EFP41735.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu009]
 gi|308356697|gb|EFP45548.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu010]
 gi|308360651|gb|EFP49502.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu011]
 gi|308364268|gb|EFP53119.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu012]
 gi|323717842|gb|EGB27033.1| hypothetical protein TMMG_03674 [Mycobacterium tuberculosis
           CDC1551A]
 gi|326905342|gb|EGE52275.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           W-148]
 gi|328460273|gb|AEB05696.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           KZN 4207]
 gi|328864232|gb|AEB53199.1| conserved integral membrane protein YRBE4B [Mycobacterium
           tuberculosis]
          Length = 280

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/266 (19%), Positives = 115/266 (43%), Gaps = 9/266 (3%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VG 164
                 ++ + +++   QA   G  +           +++   + L+ +M        + 
Sbjct: 9   FRRFFSRLQRPVDNFGEQALFYGETMRYVPNAIT---RYRKETVRLVAEMTLGAGALVMI 65

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
              V V   ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   
Sbjct: 66  GGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATI 125

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           G+   A++G+M+++EEIDA+  M +  V  L+S R+ A ++++  L  L+  +A   A  
Sbjct: 126 GAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARF 185

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
                      ++   F++    +++    ++A  M+ A+ +V    G+     S  +G 
Sbjct: 186 TTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVGV 245

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370
            V   V  S+ +V++I    ++  + 
Sbjct: 246 AVGQAVRTSLIVVVVITLFISLAVYG 271


>gi|126433442|ref|YP_001069133.1| hypothetical protein Mjls_0833 [Mycobacterium sp. JLS]
 gi|126233242|gb|ABN96642.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 297

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 94/234 (40%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
           L           +   +  +  +  Q + +        +L++   GA+     +  ++Q 
Sbjct: 54  LFADVLRYVVTDAITMRLAVGEVFVQAWTLLKVTTMPALLMAIPIGAITTIVTSGLVNQL 113

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           GA         +  +R+   L   +++   + S I A+ G+  I EE+DA+R MG+D VR
Sbjct: 114 GATSLLGAAAGVGVIRQGAPLTAGLLMGAAAASTIAADFGARAIREELDAMRVMGVDPVR 173

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            L+ PR  AL++  PLL I    S    A ++     D+    F+  F +   + +++  
Sbjct: 174 QLVVPRFLALLLISPLLCIFIVASGTASAFLMAVGASDVAPGSFWMSFGTFTKVVDVWFA 233

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           + K       + IV+   G         +   V + VV ++ +++  +      
Sbjct: 234 IAKTVVFGAIVAIVSSLRGMEAKGGPRGVADAVNSSVVVNVVLIVFANLAITQL 287


>gi|219559567|ref|ZP_03538643.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis T17]
 gi|260202679|ref|ZP_05770170.1| hypothetical protein MtubT4_21963 [Mycobacterium tuberculosis T46]
 gi|289445097|ref|ZP_06434841.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           T46]
 gi|289571733|ref|ZP_06451960.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           T17]
 gi|289418016|gb|EFD15256.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           T46]
 gi|289545487|gb|EFD49135.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           T17]
          Length = 280

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 52/266 (19%), Positives = 114/266 (42%), Gaps = 9/266 (3%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VG 164
                 ++ + +++   QA   G  +           +++   + L+ +M        + 
Sbjct: 9   FRRFFSRLQRPVDNFGEQALFYGETMRYVPNAIT---RYRKETVRLVAEMTLGAGALVMI 65

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
              V V   ++  +G VIA QG   L   G E     L + L +R +  ++  + +A   
Sbjct: 66  GGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALIGFLSAFLNVRVVAPVIAGIALAATI 125

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           G+   A++G+M+++EEIDA+  M +  V  L+S R+ A ++++  L  L+  +A   A  
Sbjct: 126 GAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARF 185

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
                      ++   F++    +++    ++A  M+ A+ +V    G+     S  +G 
Sbjct: 186 TTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVGV 245

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370
            V   V  S+ +V++I    ++  + 
Sbjct: 246 AVGQAVRTSLIVVVVITLFISLAVYG 271


>gi|167947559|ref|ZP_02534633.1| hypothetical protein Epers_13847 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 132

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 50/127 (39%), Positives = 82/127 (64%)

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           QL  FGA+I+  +L+ +  +RE+G ++TA+++AGR+GSA  A++GSM++NEE+DA+RT G
Sbjct: 6   QLQMFGAQIYVANLVGLGMVREMGAMMTAIIMAGRTGSAYAAQLGSMQVNEEVDALRTFG 65

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +  +  L+ PR  +LI+ LPLL I ++   I+G  IV     DI    +  +      L 
Sbjct: 66  ISPMEYLVLPRSLSLILMLPLLCIWSDVLGIVGGLIVAAALLDISLLHYLQQTQEAINLM 125

Query: 309 NIFTGLI 315
           ++ TG+I
Sbjct: 126 DVLTGMI 132


>gi|153846369|ref|ZP_01993858.1| ABC-type transport system, permease component [Vibrio
           parahaemolyticus AQ3810]
 gi|149744914|gb|EDM56276.1| ABC-type transport system, permease component [Vibrio
           parahaemolyticus AQ3810]
          Length = 220

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 7/205 (3%)

Query: 78  IEQLFSLISFTHRKKIKNQKPQ-----RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHIL 132
           +E+   L++ + R  +    P                    +G    + +    S    +
Sbjct: 17  LERAAVLVALSWRLSLAELVPPSNIENAPQIPRGEDGFFERVGNATREMLVYVGSVVRFI 76

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
              +         + +      ++       G   VP+++LI F+ G +IA +      Q
Sbjct: 77  KECVLVFK--LGINRRKNVNWTTVSNIATRAGADAVPIILLIGFLMGVIIAFEIGLVAQQ 134

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
           FGA +F  D + I   RE+G L+TA++ AGR+G+A  AEIG+ K+NEEI+A+ T G+  V
Sbjct: 135 FGAVLFVADGIGISMFRELGPLMTAIVFAGRTGAAFAAEIGTQKVNEEINALHTFGICPV 194

Query: 253 RILISPRIWALIISLPLLTILANFS 277
             L+ PRI+A ++ LPLLT+LA+  
Sbjct: 195 EFLVIPRIYASVLVLPLLTVLADII 219


>gi|224369539|ref|YP_002603703.1| ABC-type transport system involved in resitance to organic
           solvents, permease protein [Desulfobacterium
           autotrophicum HRM2]
 gi|223692256|gb|ACN15539.1| ABC-type transport system involved in resitance to organic
           solvents, permease protein [Desulfobacterium
           autotrophicum HRM2]
          Length = 278

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 46/276 (16%), Positives = 110/276 (39%), Gaps = 12/276 (4%)

Query: 99  QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLL-SLI 157
           +++   N    L   +GK    F+    S A  L  +             ++  +  +  
Sbjct: 8   RKTGMGNPLWRLLGALGKSTTAFV----SMAVYLTALAFTILVQATKPRHWRRTVRKAFS 63

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           RQ+   G+  +  V L++   G ++  Q    L + G   +   L  ++ +RE+  LLT 
Sbjct: 64  RQLLETGIKTIIPVGLVALFIGVLVVMQAQLWLGKLGQTEWLGPLFVVVVVRELAPLLTN 123

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +++  ++GS + +E+  M ++ ++  +   G+D +  LI PR+ A ++S   LT+L    
Sbjct: 124 LIMILQNGSKMTSELAGMTVSGKVRMLDAQGIDPLIYLILPRVTATVVSTFCLTLLFIVF 183

Query: 278 AIIGASIVIWKYY--DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
           +++   +  +      +   +F  +        ++   L+          ++   EG  +
Sbjct: 184 SLVSGYLFSFALGLRLLAPQIFLDQILRALQSRDLLNLLLTGMIPPLLTTVICCSEGLCL 243

Query: 336 GVHSNSLGKKV----TTCVVQSISIVIIIDSLFAIF 367
            +   ++        T   V S+ ++ +  S+    
Sbjct: 244 SLTRATVPNATSLALTRSTV-SLFLISVTISVLTYL 278


>gi|207109506|ref|ZP_03243668.1| hypothetical protein HpylH_09844 [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 137

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 48/139 (34%), Positives = 79/139 (56%), Gaps = 2/139 (1%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   +GK IV+  N   +  +  G+++    +   +  +F   +  L+  +   G   +P
Sbjct: 1   MITKLGKSIVETYNTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLP 58

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V IL  F+ G  +A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  
Sbjct: 59  VSILTVFIVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFT 118

Query: 230 AEIGSMKINEEIDAIRTMG 248
           A+IG MKI EE+DA++TMG
Sbjct: 119 AQIGVMKITEELDAMKTMG 137


>gi|237757027|ref|ZP_04585479.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237690807|gb|EEP59963.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 137

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/135 (32%), Positives = 75/135 (55%), Gaps = 6/135 (4%)

Query: 129 AHILGLVISNTGE----FCASSYKFKGF--LLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
             ++  +I +TG     F  +   FK F  +  +++ M  +GV+  P+++L  F TG V+
Sbjct: 1   MGVINSLIEHTGNITIFFLRTLLSFKKFPKIKHILKYMEDIGVNAAPLIVLTGFFTGGVL 60

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
             +      +F AE     L+S+   RE+  +L A+++  RSGSAI A IG+M+I E+ID
Sbjct: 61  VVETYPTFHKFNAEFLMGALVSLSLARELSPVLVALLVTARSGSAIAANIGTMRITEQID 120

Query: 243 AIRTMGLDFVRILIS 257
           A+  M +D +R L+ 
Sbjct: 121 ALEVMAVDPMRYLVL 135


>gi|108757210|ref|YP_632090.1| hypothetical protein MXAN_3910 [Myxococcus xanthus DK 1622]
 gi|108461090|gb|ABF86275.1| putative membrane protein [Myxococcus xanthus DK 1622]
          Length = 248

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 53/246 (21%), Positives = 106/246 (43%), Gaps = 3/246 (1%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
                 G  +        +S +        + Q++ +G   V +V+      GAV+    
Sbjct: 3   GVLSFFGAPVVMLARTVRASTRDGVPWRESLAQLHELGGRSVWLVMSGMAFFGAVLVTIA 62

Query: 187 AFQLSQF-GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
             Q  +F G           L +RE+G  ++A++ A R+G+A  AE+ +M +NE+++A+ 
Sbjct: 63  NSQARRFVGNVAVLGPAYFELLIRELGPAVSALLTASRAGAAHAAELSTMSVNEQVEALE 122

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
               D    L++PR++A ++ +PLL IL   +A + A+ V    + +    F        
Sbjct: 123 MSAGDPYADLVAPRVFAGVMGVPLLCILGTIAATLSAAAVAQFAFGVDGRAFMD--PRYV 180

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
              ++   L+KA      I + A   G      + ++G+  T  VV +    ++ID   +
Sbjct: 181 DGWDLLAALLKAAGCGLYIPLAAAVAGLKARGGAEAVGEATTDGVVAASLGCLLIDLAVS 240

Query: 366 IFYFAI 371
           + +  +
Sbjct: 241 LAFQLL 246


>gi|313673540|ref|YP_004051651.1| hypothetical protein Calni_1580 [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312940296|gb|ADR19488.1| protein of unknown function DUF140 [Calditerrivibrio nitroreducens
           DSM 19672]
          Length = 258

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 10/241 (4%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
                YH+GK  V               V+S    F           +  +RQ+Y+ GV 
Sbjct: 1   MVRTIYHLGKFFVDGFRVLKDYLLFCNKVLS---RFLTFKILNPAIFMVTLRQVYFTGVQ 57

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + VV++I+ + G  +       L   GA      +  ++ +RE+   LTA++++ RS +
Sbjct: 58  IIRVVVIIAIIFGLGLVGTLGKFLMNIGAYQKIGTIFVVVVIREVAPFLTALLLSLRSAT 117

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEI  MK+  EI +I+  G+D    L  PRI+A ++    L ++ +  +I     ++
Sbjct: 118 AVGAEISMMKLGSEIRSIKIHGIDEYSYLFLPRIFAGMVCSFSLAVIFSAVSITIGYFLL 177

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
               +I F    S       + +IF  + K       +  + +         S  +GK  
Sbjct: 178 SFQLNITFDYMVSLIFDALNINDIFCFIYKTILFGFTLMTLPIF-------TSMGVGKAT 230

Query: 347 T 347
           T
Sbjct: 231 T 231


>gi|291287596|ref|YP_003504412.1| hypothetical protein Dacet_1692 [Denitrovibrio acetiphilus DSM
           12809]
 gi|290884756|gb|ADD68456.1| protein of unknown function DUF140 [Denitrovibrio acetiphilus DSM
           12809]
          Length = 258

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 98/239 (41%), Gaps = 3/239 (1%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
            K + + +G+  +                I         +   K   L   RQ+Y+ GV 
Sbjct: 1   MKQIIHRLGRWAIDNSVFYYGYLGFTRKFIKGCFNRHLLNPSVK---LVFFRQIYFTGVQ 57

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +P+  ++S V G  +       + QFGA+    D++ ++ ++ +  ++ A+++  RS +
Sbjct: 58  ILPMFSVVSIVIGLALVGGLTKFMVQFGAQDRVGDVLVLVTIKHLAPMVAAILLVLRSST 117

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEI  MK+N EID +R++ ++    L  PRI + I+    L  +  + +++G  +++
Sbjct: 118 AVTAEIALMKMNNEIDTLRSLSINPFIYLYIPRIASGIVCTGALATIFVYISLLGGYMIL 177

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
               +I F               +   L+K   +   +  + +     V      +   
Sbjct: 178 SFNLNISFGFLMQTIFDAFNFKIVLVFLMKIVLLGYFLMSLPIFSALQVHNSVTEIPIA 236


>gi|207110315|ref|ZP_03244477.1| hypothetical protein HpylH_14585 [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 113

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 39/111 (35%), Positives = 59/111 (53%)

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H T    +   G
Sbjct: 1   FLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLHDTVGWNHFLVG 60

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           ++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+ F
Sbjct: 61  IVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDACF 111


>gi|148823178|ref|YP_001287932.1| integral membrane protein YrbE3a [Mycobacterium tuberculosis F11]
 gi|148721705|gb|ABR06330.1| hypothetical integral membrane protein yrbE3A [Mycobacterium
           tuberculosis F11]
          Length = 141

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 59/133 (44%)

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
             I EE+DA+R MG++ ++ L +PR+ A       L  +   + +IGA         +  
Sbjct: 2   RTIREELDALRVMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSA 61

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
             + +   +     ++   +IKA       G++A  +G +VG     +G+ V   VV + 
Sbjct: 62  GAWVTGLTTLTHTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAF 121

Query: 355 SIVIIIDSLFAIF 367
            ++ +I+ +    
Sbjct: 122 IVLFVINIVVTAV 134


>gi|167951062|ref|ZP_02538136.1| ABC-type toluene export protein [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 189

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/108 (31%), Positives = 64/108 (59%), Gaps = 4/108 (3%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
           +++S       + Y+    L  +IRQ++++G   + V+++    TG V+A Q    L +F
Sbjct: 4   MLLSALLSLFRAPYQ----LEPVIRQLHFIGARSMLVIVISGLFTGMVLALQFHNTLERF 59

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           G+       +++  LRE+G ++ A+M+ GR+GSA+ AEIG M+ +E+I
Sbjct: 60  GSVDLLGSAVALALLRELGPVMAALMVVGRAGSAMCAEIGIMRTSEQI 107


>gi|68171321|ref|ZP_00544719.1| ABC transporter permease protein [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|67999248|gb|EAM85900.1| ABC transporter permease protein [Ehrlichia chaffeensis str.
           Sapulpa]
          Length = 105

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 40/104 (38%)

Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI 324
           +++P++ + A+     G  IV          ++           ++  GL+KA      I
Sbjct: 1   VAMPIVILCADLIGAYGGYIVGSYQLGYTSEMYIKGVIKFLHAKDVTLGLVKATVFGFII 60

Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
             +    G+     +  +G   T  VV S   +I+ + +  +FY
Sbjct: 61  SFMGCYSGYYCSGGARGVGLATTYVVVVSSMFIILFNYIITVFY 104


>gi|58040452|ref|YP_192416.1| ABC transporter permease [Gluconobacter oxydans 621H]
 gi|58002866|gb|AAW61760.1| Putative ABC transport system permease protein [Gluconobacter
           oxydans 621H]
          Length = 274

 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 108/268 (40%), Gaps = 6/268 (2%)

Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162
                +++  H+G      +  +         ++             +    + + Q   
Sbjct: 9   RITMVRSMLVHLGYFSRTQMRFTLMMIGAGWGIMREATRLTTWRRTVRIEFWASLHQAVG 68

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
            G+      ++ + +TG  I  Q  + L   G    +  ++S + +REI  +L  V++ G
Sbjct: 69  GGILS---TLVTAALTGFGIVAQTVYWLGFAGMAQMTGSILSTVLVREIAPVLVGVILLG 125

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           RSG  ++ E+G++    ++ A+  MG+D     + PR  A+ IS   L ++ + +A++  
Sbjct: 126 RSGMLMLTELGTLTTGGQMRAMTGMGIDPFISFLLPRSLAMTISGFTLGVIFSMTALLVG 185

Query: 283 SIVIWK--YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
             V        +P   F  +  S+    + F    K  F   A+G+ +   G  V    +
Sbjct: 186 YAVCRVEDAITMPIWAFLDQVVSSVKPIDYFVIPAKFIFSGYAVGVCSCLSGMDVT-TED 244

Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFY 368
            L   +     + +  +++I+ +F++ +
Sbjct: 245 DLSSMLPRGFARGMLSIMVINVVFSVCF 272


>gi|3123858|gb|AAC15953.1| hypothetical integral membrane protein [Campylobacter jejuni]
          Length = 133

 Score =  101 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/98 (32%), Positives = 47/98 (47%)

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
            +  +I+G  +V     DI F  F  RF     + +I  GL KAP     IG++A   GF
Sbjct: 1   VDAISILGGMVVAKINLDISFGEFLRRFREAVEMKHIIIGLAKAPIFGFLIGLIACFRGF 60

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
            V   + S+G   T  VV +I  VI  D+LF++    +
Sbjct: 61  EVKNTTQSIGIYTTKSVVNAIFWVIAFDALFSVVLTIM 98


>gi|213023205|ref|ZP_03337652.1| hypothetical protein Salmonelentericaenterica_11695 [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 105

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 1/104 (0%)

Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGI 326
           PLLTI+     I G S+V   +  I    F+S   +      ++   LIK+   A  +  
Sbjct: 1   PLLTIIFVAVGIWGGSLVGVSWKGIDAGFFWSAMQNAVDWRMDLVNCLIKSVVFAITVTW 60

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +A+  G+     S  + +  T  VV +   V+ +D +     F 
Sbjct: 61  IALFNGYDAIPTSAGISRATTRTVVHASLAVLGLDFVLTALMFG 104


>gi|330994287|ref|ZP_08318215.1| Protein trigalactosyldiacylglycerol 1 [Gluconacetobacter sp.
           SXCC-1]
 gi|329758754|gb|EGG75270.1| Protein trigalactosyldiacylglycerol 1 [Gluconacetobacter sp.
           SXCC-1]
          Length = 300

 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 46/284 (16%), Positives = 103/284 (36%), Gaps = 20/284 (7%)

Query: 90  RKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKF 149
            +     + +       F      IG+     +  +          +  +    +     
Sbjct: 24  AQPEPENRGRLIALLGRFAPWLAAIGRLTRHQVRFTLLLIGAGWGTLRESLRPNSWRRPV 83

Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209
           K    + +RQ+   G      +++ + + G ++  Q A+ L   G    +  ++  + +R
Sbjct: 84  KYEFRATLRQVVSGGFLS---IVITATLAGLMVVSQAAYWLGYAGMAQMTGSILVSVLVR 140

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
           EI  +L  +++ GRSG   + EIG M +  E+  ++  G+D    L+ PR +A  +    
Sbjct: 141 EISPILVGIILMGRSGMLSLTEIGMMVLGGEVRGLQARGIDPFLALVMPRTFAFTLGGFT 200

Query: 270 LTILANFSAIIGASIVIWKYYDIPFA--VFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327
           L ++    +++   +V      I  +   FF    +  T  +     +K   +   +G+ 
Sbjct: 201 LGMIFAVVSLLMGFVVAHASGAITSSVWTFFFNVLAAMTTWDYLIIPLKFVLVGFFVGLG 260

Query: 328 AMKEGFAVGVH-------SNSLGKKVTTCVVQSISIVIIIDSLF 364
           A   G  V               +         I +V++++ LF
Sbjct: 261 ACISGLTVSSTDTMATIMPRGFARG--------IMLVLVVNILF 296


>gi|329114262|ref|ZP_08243024.1| ABC Transporter Permease Protein [Acetobacter pomorum DM001]
 gi|326696338|gb|EGE48017.1| ABC Transporter Permease Protein [Acetobacter pomorum DM001]
          Length = 298

 Score =   99 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 95/245 (38%), Gaps = 5/245 (2%)

Query: 94  KNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFL 153
            ++  +R   +   +     IG+ + +              VI  +    A     +   
Sbjct: 26  AHKPAKRVPLHEWIRRKLAWIGRLVRRQARFFLVVLGAGWGVIFESFRSHAWRRTVRYEF 85

Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
           ++ +  +   GVS     +    +TG     Q  + L   G    +  ++  + +REI  
Sbjct: 86  VTTMNNIIGGGVSA---SLFAGMLTGVAAVSQVIYWLGLTGLAKMTGSILVNVVIREIAP 142

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           +L  +++ GR+G     E+G + I  ++ +++++G+D   +L+ PR  A  ++   L IL
Sbjct: 143 ILVGILLLGRNGMLSATELGLLTIGGQVRSMQSVGMDPFLLLVLPRTLAFTVAGFTLGIL 202

Query: 274 ANFSAIIGASIV--IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
            + S++I   ++  I      P   F     +  ++ +     +K   +   +G+     
Sbjct: 203 FSMSSLITGYVMSRISGVITNPIWTFLDDVAAAMSVTDYAIIPLKFIMVGFVVGLGGCLT 262

Query: 332 GFAVG 336
           G    
Sbjct: 263 GLTAT 267


>gi|258541977|ref|YP_003187410.1| ABC transporter permease [Acetobacter pasteurianus IFO 3283-01]
 gi|256633055|dbj|BAH99030.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-01]
 gi|256636112|dbj|BAI02081.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-03]
 gi|256639167|dbj|BAI05129.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-07]
 gi|256642221|dbj|BAI08176.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-22]
 gi|256645276|dbj|BAI11224.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-26]
 gi|256648331|dbj|BAI14272.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-32]
 gi|256651384|dbj|BAI17318.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256654375|dbj|BAI20302.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-12]
          Length = 299

 Score = 99.2 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 95/245 (38%), Gaps = 5/245 (2%)

Query: 94  KNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFL 153
            ++  +R   +   +     IG+ + +              VI  +    A     +   
Sbjct: 27  AHKPAKRIPVHEWIRRKLAWIGRLVRRQARFFLVVLGAGWGVIFESFRSHAWRRTVRYEF 86

Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
           ++ +  +   GVS     +    +TG     Q  + L   G    +  ++  + +REI  
Sbjct: 87  ITTMNSIIGGGVSA---SLFAGMLTGVAAVSQVIYWLGLTGLAKMTGSILVNVVIREIAP 143

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           +L  +++ GR+G     E+G + I  ++ +++++G+D   +L+ PR  A  ++   L IL
Sbjct: 144 ILVGILLLGRNGMLSATELGLLTIGGQVRSMQSVGMDPFLMLVLPRTLAFTVAGFTLGIL 203

Query: 274 ANFSAIIGASIV--IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
            + S++I   ++  I      P   F     +  ++ +     +K   +   +G+     
Sbjct: 204 FSMSSLITGYVMSRISGVITNPIWTFLDDVAAAMSVTDYAVIPLKFIMVGFVVGLGGCLT 263

Query: 332 GFAVG 336
           G    
Sbjct: 264 GLTAT 268


>gi|209545500|ref|YP_002277729.1| hypothetical protein Gdia_3388 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209533177|gb|ACI53114.1| protein of unknown function DUF140 [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 296

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 90/232 (38%), Gaps = 5/232 (2%)

Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
                   IG+     +  +     +   V+  +    +     +      +RQ+   GV
Sbjct: 36  RVLPPLARIGRLTRHQVRFALVLVGMGWGVLRESVRPNSWRRTVRDEFRLCLRQVVGGGV 95

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
                 +  + + G  +  Q A+ L   G    +  ++  + +REI  +L  +++ GRSG
Sbjct: 96  LS---TLFTATLAGLTVVSQAAYWLGFAGMAQMTGSILVSVLVREIAPVLVGIILLGRSG 152

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
              + EIG + +  ++ A++  GLD   +L+ PR +A  +    L IL    A++   IV
Sbjct: 153 MLTLTEIGMLTLGGQVRAMQAQGLDPFLLLVMPRTFAFTVGGFTLGILFATMALLMGFIV 212

Query: 286 IW--KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
                   +    FFS   +  +  +     +K   +   +G+ A   G  V
Sbjct: 213 THTAGVMSMSVWTFFSDVLTAMSAWDFLVIPLKFVLVGFFVGLGACITGLLV 264


>gi|162148733|ref|YP_001603194.1| putative ABC transport system permease [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161787310|emb|CAP56904.1| putative ABC transport system permease protein [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 296

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 90/232 (38%), Gaps = 5/232 (2%)

Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
                   IG+     +  +     +   V+  +    +     +      +RQ+   GV
Sbjct: 36  RVLPPLARIGRLTRHQVRFALVLVGMGWGVLRESVRPNSWRRTVRDEFRLCLRQVVGGGV 95

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
                 +  + + G  +  Q A+ L   G    +  ++  + +REI  +L  +++ GRSG
Sbjct: 96  LS---TLFTATLAGLTVVSQAAYWLGFAGMAQMTGSILVSVLVREIAPVLVGIILLGRSG 152

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
              + EIG + +  ++ A++  GLD   +L+ PR +A  +    L IL    A++   IV
Sbjct: 153 MLTLTEIGMLTLGGQVRAMQAQGLDPFLLLVMPRTFAFTVGGFTLGILFATMALLMGFIV 212

Query: 286 IW--KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
                   +    FFS   +  +  +     +K   +   +G+ A   G  V
Sbjct: 213 THTAGVMSMSVWTFFSDVLTAMSAWDFLVIPLKFVLVGFFVGLGACITGLLV 264


>gi|74316998|ref|YP_314738.1| ABC-type transport system permease [Thiobacillus denitrificans ATCC
           25259]
 gi|74056493|gb|AAZ96933.1| ABC-type transport system ipermease component [Thiobacillus
           denitrificans ATCC 25259]
          Length = 264

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 46/232 (19%), Positives = 94/232 (40%), Gaps = 5/232 (2%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKF-KGFLLSLIRQMYYV 163
           NS       +G K+V +     +    LG      G        + +     +++Q+Y+ 
Sbjct: 2   NSIAASLESLGAKVVGWFTVGYAMFSFLG----KAGLLLLERETWNRATFDVVVKQVYFT 57

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
            V  + V +  + V   +I          FG   F+ ++   + + E+   LTA+ +A R
Sbjct: 58  AVQILHVFLGYALVISWLIITIILSTARDFGLTAFASEMTIRVLVLELLPFLTALFVALR 117

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           SGSAI  E+  M++N E+DA+    +  ++    PR+   ++S+  L  LA   A++   
Sbjct: 118 SGSAINTEVALMQVNNELDALAHCKVPPMQFEFLPRLIGGVVSVVTLAGLAGLLALLLGY 177

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
           + I+      F  +            +   ++K+     A+ ++ +  G   
Sbjct: 178 LAIYGAGTAGFEPYTQTIAKIFDFGILAGLVVKSALFGLAVTLIPVTAGLET 229


>gi|320102563|ref|YP_004178154.1| hypothetical protein Isop_1016 [Isosphaera pallida ATCC 43644]
 gi|319749845|gb|ADV61605.1| protein of unknown function DUF140 [Isosphaera pallida ATCC 43644]
          Length = 290

 Score = 97.2 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 34/250 (13%), Positives = 94/250 (37%), Gaps = 17/250 (6%)

Query: 87  FTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASS 146
            ++  + +   P++   ++  +     IG+  +  I+   +   +    +  T       
Sbjct: 9   RSNPSQPRRSLPRKGRGFDPLRRSLAAIGRGTLATISYLGALKLLTLATLRAT---IRPP 65

Query: 147 YKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206
                   ++  Q+ ++   G+P+ +L+    G  +A Q  +  +   A   +  ++   
Sbjct: 66  RDAPPLRRAVSAQLAWMLSMGLPLTVLVHVSLGGFLAMQSYYGATFILA---TGPVVLTG 122

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            +R +  ++  +++ G  G+   AE+          A +   +     L + R WA +I+
Sbjct: 123 LIRNLSPVMAGLILVGMVGTRCTAEL----------ARQGFRISP-AYLTAARFWAAVIA 171

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326
            P+L +    +  +  + V +++  +    +F          ++   L+K      A  +
Sbjct: 172 GPILGLAGTLTGSLAGAAVAYRWLGVSVQGYFEFGWEMVWFRDVVGLLVKGMLFGGATVL 231

Query: 327 VAMKEGFAVG 336
           +A  EG  + 
Sbjct: 232 IAALEGLRIT 241


>gi|324999497|ref|ZP_08120609.1| hypothetical protein PseP1_12051 [Pseudonocardia sp. P1]
          Length = 263

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 96/239 (40%)

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G+       F ++     G+  + +   Y         +    F      +       +Q
Sbjct: 17  GMAALLVTVFGSAIRNPVGYWRAAMLDFYTTVRRAALPMAAAIFGFLLFFSLVVVIFFNQ 76

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
            GA      L+ +   R   V + AV+++G +G+A+ A++G+ KI +E+DA+R MGLD V
Sbjct: 77  VGAVSLGSALLFLYGFRAFTVFVVAVVVSGVAGAALTADLGARKIRDELDAMRVMGLDPV 136

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
           R L+ PR+ ++++   L+ +     + +   I    Y  +    ++    +      + +
Sbjct: 137 RELVVPRVVSMVVLTTLIVLPGLGVSAVALQIGASYYGHLAAVDYYDNLFAALVPLELGS 196

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
            ++    +   I IV   +G      S  +G+ V   VV     + +    +   +  +
Sbjct: 197 VVLNCFLLGIMIAIVCCYKGLNASGGSIGVGRAVNQAVVICYVGLFVFQLAYNAVFLGL 255


>gi|218463600|ref|ZP_03503691.1| probable ABC transporter, permease protein [Rhizobium etli Kim 5]
          Length = 191

 Score = 96.5 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 41/176 (23%), Positives = 78/176 (44%), Gaps = 11/176 (6%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEKY 65
            R +GNW+S  +  +  D    +++  +S    VDLS IT+IDT G  L+       E  
Sbjct: 24  VRLSGNWRSAYVHLVLRDFEKLLHQ--KSGDLTVDLSDITDIDTAGIWLLCRLKKEAEAA 81

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
              ++ +G + HI+++ ++ S    K             +    +   IGK      ++ 
Sbjct: 82  GRTVRFEGTNPHIDEMLAMFSEEPAKPEPE----PREKISLAARILAPIGKMTYDVWDNL 137

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
            +  +ILG  +                  S++ Q+ ++GV  VP+++L+SF+ GA+
Sbjct: 138 AAAMYILGSAVRGAQMKFGRGS--GVSPASIVNQIDHMGVRAVPIILLMSFLIGAI 191


>gi|291446775|ref|ZP_06586165.1| ABC-transporter integral membrane protein [Streptomyces roseosporus
           NRRL 15998]
 gi|291349722|gb|EFE76626.1| ABC-transporter integral membrane protein [Streptomyces roseosporus
           NRRL 15998]
          Length = 113

 Score = 96.1 bits (238), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 30/98 (30%), Positives = 51/98 (52%)

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           +I+G  GSAI A++GS KI EE+DA+  MG+  ++ L+ PR+ A ++   LL  L +   
Sbjct: 16  VISGAPGSAICADLGSRKIREELDAMEVMGVSPIQRLVVPRVLATMLVAVLLNGLISVVG 75

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316
            +G         D     + + F + A L +++    K
Sbjct: 76  TLGGYFFNVIMQDGTPGAYLASFSALAQLPDLYISEFK 113


>gi|251771004|gb|EES51588.1| probable ABC transporter, permease protein [Leptospirillum
           ferrodiazotrophum]
          Length = 211

 Score = 96.1 bits (238), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 99/205 (48%)

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
            G+S +P++ +++ + GA +  +   +L + G +     ++  +    +G   TA+++  
Sbjct: 3   AGLSALPIITVVALLVGAGVVAETGIELPKLGIQNLVGTIVLHVIFGIVGPFATALIVIA 62

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           RS S +  EIG+M+++ E+D I  +G++   ++I+P I  +I+S   LT      A+ G 
Sbjct: 63  RSTSGLAVEIGNMRVSGELDTIEMLGVNLSYLIITPNIIGIIVSTIALTFYFGIIAMAGG 122

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
             +      +P A           L+++   L++  F    I  V++  G  V   +  +
Sbjct: 123 FAMALMGLSMPVATLVRMIEMNIRLSDLLLPLLEGLFYGLIISSVSVYHGLRVKRSAREV 182

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIF 367
            K+    +V ++++  +  SL+ IF
Sbjct: 183 PKETRLALVSALALSTVALSLYLIF 207


>gi|196229086|ref|ZP_03127952.1| ABC-type transport system involved in resistance to organic
           solvents permease component-like protein [Chthoniobacter
           flavus Ellin428]
 gi|196227367|gb|EDY21871.1| ABC-type transport system involved in resistance to organic
           solvents permease component-like protein [Chthoniobacter
           flavus Ellin428]
          Length = 261

 Score = 95.7 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 52/246 (21%), Positives = 106/246 (43%), Gaps = 6/246 (2%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFL--LSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           S   +LG + S            +  +     +RQ+           ++ +F+ G   A 
Sbjct: 10  SVGSLLGAIFSVGARCLPRVLLGRATIVERETVRQILSFQSGTAFASVMTAFIYGLAAAY 69

Query: 185 QGAFQLSQFGA-EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
                 +   A E   +  +    L  +     A ++  +    + ++I SM+ ++E+DA
Sbjct: 70  AVLSNTASPAAFETLVLPQLGGAFLHYVVPFAIANLVVLKGVVGMTSDITSMRASQEVDA 129

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  +GL    ++ +PR  ALI++ P L +L  +SA +GA +V+W      F  F + F S
Sbjct: 130 LEAVGLHPAEMIFAPRALALIVTAPALAVLGVYSACLGAWLVVWLTAGTGFVAFVAAFAS 189

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS--LGKKVTTCVVQSISIVIIID 361
           + T   +   + K    A A+ +++   GF VG  +    +G   T+ V  ++   I+++
Sbjct: 190 SVTSIGMLFAVGKLAITALAMSLISGYFGF-VGARAEQGFVGHITTSAVAMAVFSTIVVN 248

Query: 362 SLFAIF 367
            L ++ 
Sbjct: 249 LLLSLL 254


>gi|296115253|ref|ZP_06833894.1| putative ABC transport system permease protein [Gluconacetobacter
           hansenii ATCC 23769]
 gi|295978354|gb|EFG85091.1| putative ABC transport system permease protein [Gluconacetobacter
           hansenii ATCC 23769]
          Length = 302

 Score = 95.7 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 91/237 (38%), Gaps = 5/237 (2%)

Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY 161
            F          IG+ +   +  +          +  +    A          S +RQ+ 
Sbjct: 38  RFLLRVAPWLAAIGRFVRHQVRFTLMLVGAGWGTLRESLRPNAWRRPVIFEFRSCLRQVI 97

Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221
             G+      ++ + + G ++  Q A+ L   G    +  ++  + +REI  +L  +++ 
Sbjct: 98  AGGLIS---TVVTATLAGLMVVSQAAYWLGFAGMAQMTGSILVSVLVREITPILMGIILL 154

Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281
           GRSG   + +IG M +N ++  ++  GLD    L+ PR +A ++    L I+    +++ 
Sbjct: 155 GRSGMLSLTQIGLMVLNGQVRTMQARGLDPFLTLVMPRAFAFMVGGFSLGIIFAVVSLLM 214

Query: 282 ASIVIWKYYDIPFA--VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
              V      I  +   FF    +  T  +     +K   +   +G+ A   G  V 
Sbjct: 215 GFFVAHATGAINSSVWTFFFNVLAAMTTWDYLIIPLKFLLVGFFVGLGACISGLTVS 271


>gi|315635511|ref|ZP_07890777.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Arcobacter butzleri JV22]
 gi|315480269|gb|EFU70936.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Arcobacter butzleri JV22]
          Length = 91

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 31/91 (34%), Positives = 51/91 (56%)

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
            I+     D+ F  F +R H+   L ++  G+ KA F   AI I+    GF V  ++ S+
Sbjct: 1   MIIASSSLDVTFIEFINRLHNEVPLKHLILGVFKALFFGFAIAIIGCYRGFQVQNNTTSI 60

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           GK  T  VV +I +VI+ID++F++ +  +GI
Sbjct: 61  GKFTTMSVVNAIFVVILIDAVFSVIFTQMGI 91


>gi|114328087|ref|YP_745244.1| ABC transporter permease [Granulibacter bethesdensis CGDNIH1]
 gi|114316261|gb|ABI62321.1| ABC transporter permease protein [Granulibacter bethesdensis
           CGDNIH1]
          Length = 273

 Score = 92.6 bits (229), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 83/239 (34%), Gaps = 5/239 (2%)

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
            +  +   +     IG+     +            V+   G         +      + Q
Sbjct: 7   PAQSFARVRLFLRVIGRGTRNMLRFLLIMVAASAGVVLEVGRPSCWRRTTRAAFGQTLHQ 66

Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219
               GV      +  + + G  +  Q  + L   G    +  +++ + LRE+  +L  ++
Sbjct: 67  AAGGGVIS---TLFTATLVGIAMISQAIYWLGFAGMVESTGTILATILLRELSPILVGII 123

Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279
           + GRSG  +++E+G +  N  I  +   G+D   ++I PR  A  +S   L ++   +A+
Sbjct: 124 LLGRSGMPMISELGMLSANGHIRTLEAQGIDPFILIIVPRTIAFTVSAFTLGMVFAVTAL 183

Query: 280 IGASIVIW--KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
                              F +    + +  +     +K   +   +G+ +   G +  
Sbjct: 184 CVGFAAATEEGLITQSLWGFLTSVTGSMSELDYIIIPLKLMVVGFLVGLSSCLTGLSAQ 242


>gi|315122739|ref|YP_004063228.1| ABC transporter [Candidatus Liberibacter solanacearum CLso-ZC1]
 gi|313496141|gb|ADR52740.1| ABC transporter [Candidatus Liberibacter solanacearum CLso-ZC1]
          Length = 147

 Score = 84.9 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 56/108 (51%), Positives = 75/108 (69%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           SENG+ VFR  G+W+S EIS+I+  +++ INKS Q D AIVDL  ITEIDTIG   I+YF
Sbjct: 18  SENGVKVFRLTGSWRSAEISKISKGILITINKSTQEDLAIVDLLEITEIDTIGVATIIYF 77

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
            EKY GKI+LQG++ H+EQLFS++S     K+K +  +  F     +N
Sbjct: 78  TEKYRGKIQLQGMTAHMEQLFSIMSLNPNNKLKQKNQKIYFLMIFLEN 125


>gi|4580939|gb|AAD24544.1| YrbE1A [Mycobacterium leprae]
          Length = 112

 Score = 84.5 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 8/119 (6%)

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +P+ +L+ F    ++A        QF A   S    +I  + ++G L T +++AG   +
Sbjct: 2   SIPLTVLLIFTLNVLLA--------QFSAADLSGAGAAIGAVTQLGPLTTVLVVAGAGST 53

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           +I A++G+  I EEIDA+  +G+D +  L+ PR+ A  +   LL  L     ++G  + 
Sbjct: 54  SICADLGARTIREEIDAMEVLGIDPIHRLVVPRVLAATLVATLLNGLVITVGLVGGYLF 112


>gi|41406191|ref|NP_959027.1| hypothetical protein MAP0093 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41394539|gb|AAS02410.1| hypothetical protein MAP_0093 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 175

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 63/131 (48%), Gaps = 6/131 (4%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVILISFVT 178
           +    H+L   +           +++   L L+  + +      VG     V +++ F  
Sbjct: 25  TMRLGHMLVFFVRAVLAVPTVLRQYRTEFLRLLSNIAWGNGSIVVGGGTAGVAVVLGFTA 84

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA++A +G   L+  G    +  + S++  RE+  ++ ++  A ++G    A++G+M+I 
Sbjct: 85  GALVAVEGYNFLNLLGLGPATGIISSLVNTRELAPIMASLAFAMQAGCRFTAQLGAMRIA 144

Query: 239 EEIDAIRTMGL 249
           EEIDA+ ++ +
Sbjct: 145 EEIDALESLAI 155


>gi|307777742|dbj|BAJ21267.1| ABC transporter permease [Pseudomonas aeruginosa]
          Length = 66

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 28/62 (45%)

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           N+  G+IK+   A  +  +A+ +G+     S  + +  T  VV +   V+ +D +     
Sbjct: 3   NVLNGVIKSIVFAFVVTWIAVYQGYDCEPTSEGISRATTRTVVYASLAVLGLDFILTALM 62

Query: 369 FA 370
           F 
Sbjct: 63  FG 64


>gi|121594930|ref|YP_986826.1| ABC-type transport system permease [Acidovorax sp. JS42]
 gi|222110419|ref|YP_002552683.1| hypothetical protein Dtpsy_1216 [Acidovorax ebreus TPSY]
 gi|120607010|gb|ABM42750.1| ABC-type transport system ipermease component [Acidovorax sp. JS42]
 gi|221729863|gb|ACM32683.1| protein of unknown function DUF140 [Acidovorax ebreus TPSY]
          Length = 269

 Score = 79.1 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 84/209 (40%), Gaps = 2/209 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG V+       + S   +     L R MY      +    +++ +   VI +       
Sbjct: 31  LGAVVMVL--MLSPSSYGRATRWRLARHMYQDTAPILLGFTVLAALISLVITRIVVVTAL 88

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            +G   ++++++  + + E+  L  A+ +A R+      ++  M+ +  + A+R  G D 
Sbjct: 89  SYGLSRYALEMVIRVLVLELIPLTAALFVAMRATIPNGTQLALMRQSGHLQALRQRGADP 148

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           VR+ + PR+ A + +   L  L+   A++ A + ++        V+   F          
Sbjct: 149 VRMELLPRVVAGVYASITLAALSCVVALVMAYLGVYGLNTAGLPVYTRMFGHVFAPQITL 208

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
             ++K  F + A+ ++ M  G      + 
Sbjct: 209 VFVLKTVFFSLAVALIPMASGLYESGDAR 237


>gi|108798620|ref|YP_638817.1| putative ABC transport system permease protein [Mycobacterium sp.
           MCS]
 gi|108769039|gb|ABG07761.1| putative ABC transport system permease protein [Mycobacterium sp.
           MCS]
          Length = 161

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 15/143 (10%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI--------- 172
             D   QA   G  IS+T +          +   ++RQ+  +G+    + +         
Sbjct: 25  WRDLGDQARFYGQSISSTVQAAT------TYRAEVLRQIAAIGLGAGSLAVVGGTVAVVA 78

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
            ++  T A +A Q   Q+SQ G E  +    + + +R      +A   A   G+   A++
Sbjct: 79  FLNLSTSAALASQAYNQMSQVGVEALAGFTSAYVNVRLATPASSAFAFAATIGAGTTAQL 138

Query: 233 GSMKINEEIDAIRTMGLDFVRIL 255
           G+MKINEEIDA+  MG+  +  L
Sbjct: 139 GAMKINEEIDALAVMGIRPIAYL 161


>gi|120610497|ref|YP_970175.1| ABC-type transport system permease [Acidovorax citrulli AAC00-1]
 gi|120588961|gb|ABM32401.1| ABC-type transport system ipermease component [Acidovorax citrulli
           AAC00-1]
          Length = 266

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 80/210 (38%), Gaps = 2/210 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG V++      + S   +     L R MY      +     +  +   V+         
Sbjct: 32  LGAVVAVL--MLSPSSYGRFTRARLARHMYLDTAPLLLGFTALVALICLVVTHIVVITAR 89

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            +G   +++ ++  + + E+  L  A+ +A R+      ++  M+ +   DA+R  G D 
Sbjct: 90  SYGLSHYALQMVVRVLVLELIPLTAALFVALRTTIPGGTQLALMRQSGHWDALRARGADP 149

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           VR+ + PR+ A + +   L  L+   A++ A + ++         +   F    T     
Sbjct: 150 VRVELLPRVVAGMYASITLAALSCVVALVMAYLGVYGASTAGVPAYTRMFGQVFTPPLTL 209

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341
             ++K    + A+ ++ M  G        +
Sbjct: 210 LFVLKTLLFSLAVALIPMAAGLHATGDPRA 239


>gi|121604691|ref|YP_982020.1| ABC-type transport system permease [Polaromonas naphthalenivorans
           CJ2]
 gi|120593660|gb|ABM37099.1| ABC-type transport system ipermease component [Polaromonas
           naphthalenivorans CJ2]
          Length = 267

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 96/232 (41%), Gaps = 6/232 (2%)

Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
           S+       G+   ++  +     H+  +++  T    + S   +   L L R +Y    
Sbjct: 6   SWHRRLTRTGQAAQQWFIEWWQLIHLGAVILVLT---LSPSSYRRENRLVLGRHIYMSTA 62

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             +    L+  +   VI +        +G   +++ ++  + + E+  L  A+ +A R  
Sbjct: 63  PILLGFSLLCALVTVVITRIVMVTALSYGLSQYALQVVIRVLVLELIPLSAALFVALRCT 122

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
               AE+ +M+ + E+D +R  G++ +R  + PR+ A + S   L  L+   A++ A + 
Sbjct: 123 IPDGAELTAMQASGELDEMRRQGVEPIRREVLPRVVAGMFSGITLAALSCVVAVMVAYVA 182

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV---AMKEGFA 334
           ++ +     AV+   F    T A     ++K  F   A+ ++   +   G  
Sbjct: 183 VYGFAVSGLAVYTRLFGQVFTPAVTLIFVLKTVFFCLAVSLIPMASALYGMR 234


>gi|326316567|ref|YP_004234239.1| hypothetical protein Acav_1754 [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323373403|gb|ADX45672.1| protein of unknown function DUF140 [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 266

 Score = 74.1 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 83/225 (36%), Gaps = 2/225 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           +  +    +  +   LG V++      + S   +     L R MY      +     +  
Sbjct: 17  RAARGWALAWWRIVYLGAVVAVL--MLSPSSYGRSTRARLARHMYIDTAPLLLGFTALVA 74

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
           +   V+          +G   +++ ++  + + E+  L  A+ +A R+      ++  M+
Sbjct: 75  LICLVVTHIVVVTARSYGLSHYALQMVVRVLVLELIPLTAALFVALRTTIPGGTQLALMR 134

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
            +   DA+R  G D VR+ + PR+ A I +   L  L+   A++ A + ++         
Sbjct: 135 RSGHWDALRARGADPVRVELLPRVVAGIYASITLAALSCVVALVMAYLGVYGASTAGVPA 194

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341
           +   F    T        +K    + A+ ++ M  G        +
Sbjct: 195 YTRMFGQVFTPPVTLLFALKTLLFSLAVALIPMAAGLHATGDPRA 239


>gi|121607549|ref|YP_995356.1| ABC-type transport system permease [Verminephrobacter eiseniae
           EF01-2]
 gi|121552189|gb|ABM56338.1| ABC-type transport system ipermease component [Verminephrobacter
           eiseniae EF01-2]
          Length = 287

 Score = 74.1 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 89/218 (40%), Gaps = 2/218 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            + +    +  +   LG V+       + S    G   +L R++Y      +P   +++ 
Sbjct: 40  HMARRWALAWWRIFYLGAVVLVL--ALSPSSYGPGRRQALARRLYLDTAPVLPGFTVLAA 97

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
           +   V+ +        +G   ++++++  + + E+  L  A+ +A R      A++  ++
Sbjct: 98  LISLVLTRIVVVTALSYGLSRYALEMVIRVLVLELIPLTAALFVAMRCTIGHGAQLAQLR 157

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
            + ++DA+   GLD VR  + PR  A + +   L  L++  A++   + ++         
Sbjct: 158 QSGQLDALARQGLDPVRTELLPRAIAGVFACVTLAALSSVVALVLVYLGVYGLNGAGLPG 217

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
           +   F    +        +K  F + A+ ++ M  G  
Sbjct: 218 YTRMFGQVFSPGVTLVLALKTLFFSLAVALIPMGAGLY 255


>gi|91788521|ref|YP_549473.1| ABC-type transport system permease [Polaromonas sp. JS666]
 gi|91697746|gb|ABE44575.1| ABC-type transport system ipermease component [Polaromonas sp.
           JS666]
          Length = 267

 Score = 73.7 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 94/232 (40%), Gaps = 6/232 (2%)

Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
           S++     IG+   +++ +     H   L         + S   +   L L R +Y    
Sbjct: 6   SWQGRLTQIGRAAQQWVIEWWRLIH---LGALLLVLTLSPSSYSRESRLVLSRHIYLNTA 62

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             +    ++  +   V+ +        +G   +++ ++  + + E+  L  A+ +A R  
Sbjct: 63  PILLWFTVLCALVTVVLTRIVVVTALSYGLSQYALQVVIRVLVLELIPLTAALFVALRCT 122

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
               AE+ +M+ + ++D +R  G D VR  + PR+ A + S   L  L++  A++ A + 
Sbjct: 123 IPDGAELTAMQASGQLDEMRRQGGDPVRREVLPRVVAGMFSGITLAALSSVVALVVAYVA 182

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV---AMKEGFA 334
           ++ +     A +   F    + A     ++K  F   A+ ++   +   G  
Sbjct: 183 VYGFTVSGLAAYTRLFGQVFSPAVTLIFVLKTLFFCLAVALIPMASALYGMR 234


>gi|41406205|ref|NP_959041.1| hypothetical protein MAP0107 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41394553|gb|AAS02424.1| hypothetical protein MAP_0107 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 119

 Score = 73.7 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 38/111 (34%)

Query: 261 WALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320
            A +I++  L I       +   +V           +   F    +  +I   ++K    
Sbjct: 1   MASVIAVIPLYIACLAVTYLTCQVVANIISGGSIGPYLHYFTMMLSAKDIAYSVLKCVVF 60

Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
                 V    GF        +G      +  SI++VI+++ L  +  ++I
Sbjct: 61  VWLSSTVQCYYGFYAAGGPEGVGVAAGHAMRASITVVIMVNMLLTMALWSI 111


>gi|134094912|ref|YP_001099987.1| hypothetical protein HEAR1705 [Herminiimonas arsenicoxydans]
 gi|133738815|emb|CAL61862.1| putative ABC-type transport system involved in resistance to
           organic solvents, permease component [Herminiimonas
           arsenicoxydans]
          Length = 258

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 92/214 (42%), Gaps = 3/214 (1%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           +G+ +++++          G+++ +     + +   +    ++  Q+     + +    +
Sbjct: 1   MGRAMLRWLIGGWRIVLF-GMLVLSL--SFSPATYQRDNRHAIAYQIVLGTTANLVWFSV 57

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           ++ +   ++ +        +G   ++++++  + + E+  L  A+ +A R       E+ 
Sbjct: 58  LTALASLILIRIVVVTALSYGLSKYALEMVVRVLVLELIPLTAALFVALRRTLPDGVELA 117

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
            M+   E+++++  G+D +R    PR  A + S+ +L  ++   ++I A + I+ +    
Sbjct: 118 EMRARGELESLQRQGIDPIRREFFPRAVAGVFSVLMLAAVSCVLSLILAYLSIYGFTHWA 177

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327
            A +          A     L+K  F + A+ ++
Sbjct: 178 LAGYTRVVGQIFNPAVSMIFLLKTLFFSLAVSLI 211


>gi|54296206|ref|YP_122575.1| hypothetical protein lpp0232 [Legionella pneumophila str. Paris]
 gi|148358387|ref|YP_001249594.1| putative ABC transport system permease [Legionella pneumophila str.
           Corby]
 gi|296105737|ref|YP_003617437.1| probable ABC transport system permease protein [Legionella
           pneumophila 2300/99 Alcoy]
 gi|53749991|emb|CAH11379.1| hypothetical protein lpp0232 [Legionella pneumophila str. Paris]
 gi|148280160|gb|ABQ54248.1| probable ABC transport system permease protein [Legionella
           pneumophila str. Corby]
 gi|295647638|gb|ADG23485.1| probable ABC transport system permease protein [Legionella
           pneumophila 2300/99 Alcoy]
          Length = 251

 Score = 71.0 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 90/262 (34%), Gaps = 16/262 (6%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +     K I+ F++        LG ++ +T +      K      + +  +YY G   V 
Sbjct: 3   VFRRFSKHIITFLHSLELAFRFLGHLVDSTIKVIFG--KLSIVWPNTLEMIYYSGARLVI 60

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++  I  + GA ++Q     L  F      + ++  +   EI  +L   ++  ++     
Sbjct: 61  LLSFIGILLGATVSQTVYALLKPFQLHQRVLPIVQNILTHEILPVLIGFILCIQAAL--- 117

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRIL---ISPRIWALIISLPLLTILANFSAIIGASIVI 286
                M        +     +   I+   + P I  + I+  LL +    +      +  
Sbjct: 118 ----HMVNTR----LEHYQENPEAIILAQVLPIIVGMNIASLLLYVYLVSAIFFSFYLTF 169

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
                     F S   S+ TL ++   ++K   +   +G+ +    +   +    L K V
Sbjct: 170 HFMLGFTNNEFLSYVVSSTTLFDLIYSVVKTLILCIIVGLTSGYYYYEASIRHIYLRKAV 229

Query: 347 TTCVVQSISIVIIIDSLFAIFY 368
           +  + +    +II      + +
Sbjct: 230 SRILTRGSFWLIIASMYITLTF 251


>gi|307608999|emb|CBW98412.1| hypothetical protein LPW_02641 [Legionella pneumophila 130b]
          Length = 251

 Score = 71.0 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 91/262 (34%), Gaps = 16/262 (6%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +     K I+ F++        LG ++ +T +      K      + +  +YY G   V 
Sbjct: 3   VFRRFSKPIITFLHSLELAFRFLGHLVHSTIKVIFG--KLSIVWPNTLEMIYYSGARLVI 60

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++  I  + GA ++Q     L  F      + ++  +   EI  +L   ++  ++     
Sbjct: 61  LLSFIGILLGATVSQTVYALLKPFQLHQRVLPIVQNILTHEILPVLIGFILCIQAAL--- 117

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRIL---ISPRIWALIISLPLLTILANFSAIIGASIVI 286
                M        +     +   I+   + P I  + I+  LL +   F+      +  
Sbjct: 118 ----HMVNTR----LEHYQENPEAIILAQVLPIIVGMNIASLLLYVYLVFAIFFSFYLTF 169

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
                     F S   S+ TL ++   ++K   +   +G+ +    +   +    L K V
Sbjct: 170 HFMLGFTNNEFLSYVVSSTTLFDLIYSVVKTLILCIIVGLTSGYYYYEASIRHIYLRKAV 229

Query: 347 TTCVVQSISIVIIIDSLFAIFY 368
           +  + +    +II      + +
Sbjct: 230 SRILTRGSFWLIIASMYITLTF 251


>gi|54293187|ref|YP_125602.1| hypothetical protein lpl0233 [Legionella pneumophila str. Lens]
 gi|53753019|emb|CAH14462.1| hypothetical protein lpl0233 [Legionella pneumophila str. Lens]
          Length = 251

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 91/262 (34%), Gaps = 16/262 (6%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +     K I+ F++        LG ++ +T +      K      + +  +YY G   V 
Sbjct: 3   VFRRFSKPIITFLHSIELAFRFLGHLVHSTIKVIFG--KLSIVWPNTLEMIYYSGARLVI 60

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++  I  + GA ++Q     L  F      + ++  +   EI  +L   ++  ++     
Sbjct: 61  LLSFIGILLGATVSQTVYALLKPFQLHQRVLPIVQNILTHEILPVLIGFILCIQAAL--- 117

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRIL---ISPRIWALIISLPLLTILANFSAIIGASIVI 286
                M        +     +   I+   + P I  + I+  LL +   F+      +  
Sbjct: 118 ----HMVNTR----LEHYQENPEAIILAQVLPIIVGMNIASLLLYVYLVFAIFFSFYLTF 169

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
                     F S   S+ TL ++   ++K   +   +G+ +    +   +    L K V
Sbjct: 170 HFMLGFTNNEFLSYVVSSTTLFDLIYSVVKTLILCIIVGLTSGYYYYEASIRHIYLRKAV 229

Query: 347 TTCVVQSISIVIIIDSLFAIFY 368
           +  + +    +II      + +
Sbjct: 230 SRILTRGSFWLIIASMYITLTF 251


>gi|327538488|gb|EGF25152.1| membrane protein containing ABC transporter-like domain
           [Rhodopirellula baltica WH47]
          Length = 527

 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 43/279 (15%), Positives = 97/279 (34%), Gaps = 19/279 (6%)

Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167
                 + +   +F++ +         +  +             FL   +R +   G S 
Sbjct: 251 TGPLAMLRRGAERFLDSTGRSLVAAARLPWDARPVVPRMKWAGRFLAHYLRLVG--GPSA 308

Query: 168 VPVVILISFVTGAVIAQQGAFQL-----SQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
              +I+   + G          L     +Q       +  +     R +  +L  V+IA 
Sbjct: 309 WVYLIIAGLIAGFTTTYFTLRFLPFRLYTQPLLIDELLSSIGFALYRILVPVLATVLIAA 368

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           R G+A+ A++G  +   ++DA RT+G+     L+ P + A +I+ P+L  +A  ++   +
Sbjct: 369 RCGAAVAADVGVKQYGGQVDAFRTLGIRAPAYLLIPILAAFLIATPILEWIAFTASHWIS 428

Query: 283 SIVIWKYYDIPFAVFFSR-FHSTATLANIFTGLI-----------KAPFMACAIGIVAMK 330
            +     +      F+ + F    T       +I           K          +   
Sbjct: 429 RVTFNFSHPEIGVHFWQQHFFRAITPDTTGGSIITWWKGWDWVLAKNLLCGFGTAAIGYH 488

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           +G      +  +   +T  V+ +   V+++  + A+  F
Sbjct: 489 QGITPKHSAGDVSHCITATVLWTTLYVLVVHFVVALLEF 527


>gi|32472426|ref|NP_865420.1| sulfate transport ATP-binding protein cysA [Rhodopirellula baltica
           SH 1]
 gi|32443662|emb|CAD73104.1| sulfate transport ATP-binding protein cysA [Rhodopirellula baltica
           SH 1]
          Length = 527

 Score = 70.3 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 49/321 (15%), Positives = 108/321 (33%), Gaps = 32/321 (9%)

Query: 78  IEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVIS 137
            +     I    R +  N   Q      S   L+    ++    +      A      + 
Sbjct: 210 FDSAAQTIRRIDRSEWPNVAEQMEAVALSPSQLNEAGSEQATGPLAMLRRGAE---RFLD 266

Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYV------------GVSGVPVVILISFVTGAVIAQQ 185
           +TG    ++ +       ++ +M +             G S    +I+   + G      
Sbjct: 267 STGRSLVAAARLPWDARPVVPRMKWAGRFLAHYLRLVGGPSAWVYLIIAGLIAGFTTTYF 326

Query: 186 GAFQL-----SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
               L     +Q       +  +     R +  +L  V+IA R G+A+ A++G  +   +
Sbjct: 327 TLRFLPFRLYTQPLLIDELLSSIGFALYRILVPVLATVLIAARCGAAVAADVGVKQYGGQ 386

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +DA RT+G+     L+ P + A +I+ P+L  +A  ++   + +     +      F+ +
Sbjct: 387 VDAFRTLGIRAPAYLLIPILAAFLIATPILEWIAFTASHWISRVTFNFSHPEIGVHFWQQ 446

Query: 301 -FHSTATLANIFTGLI-----------KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
            F    T       +I           K          +   +G      +  +   +T 
Sbjct: 447 HFFRAITPDTTGGSIITWWKGWDWVLAKNLLCGFGTAAIGYHQGITPKHSAGDVSHCITA 506

Query: 349 CVVQSISIVIIIDSLFAIFYF 369
            V+ +   V+++  + A+  F
Sbjct: 507 TVLWTTLYVLVVHFVVALLEF 527


>gi|296161924|ref|ZP_06844724.1| hypothetical protein BCh11DRAFT_5991 [Burkholderia sp. Ch1-1]
 gi|295887800|gb|EFG67618.1| hypothetical protein BCh11DRAFT_5991 [Burkholderia sp. Ch1-1]
          Length = 218

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 53/158 (33%), Gaps = 4/158 (2%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           V    GNW  P    +     +++ +  Q     +D S +   DT GA L+   +     
Sbjct: 40  VLAIIGNWTLPHYDTLR---ALSVERVTQDAITSLDFSRLGGHDTAGAALLAQVLGPERL 96

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
           +  L   +       +L+        K      +   N    L   IG  +++  + + +
Sbjct: 97  QSLLHDATGLDHDRLALLDAVVLAVGKVAGQPVTRRRNGVIELLERIGAAVLRLAHRTVA 156

Query: 128 QAHILGLVISNTGEFCASS-YKFKGFLLSLIRQMYYVG 164
               +GLV+ +          + +     L R+  + G
Sbjct: 157 LLGFIGLVLESLMLAACRPKARPRRTEHLLQRESCFSG 194


>gi|52840425|ref|YP_094224.1| ABC transporter permease [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|52627536|gb|AAU26277.1| probable ABC transport system permease protein [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
          Length = 251

 Score = 69.9 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 90/262 (34%), Gaps = 16/262 (6%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +     K I+ F++        LG ++ +T +      K      + +  +YY G   V 
Sbjct: 3   VFRRFSKPIITFLHSLELAFRFLGHLVHSTIKVIFG--KLSIVWPNTLEMIYYSGARLVI 60

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++  I  + GA ++Q     L  F      + ++  +   EI  +L   ++  ++     
Sbjct: 61  LLSFIGILLGATVSQTVYALLKPFQLHQRVLPIVQNILTHEILPVLIGFILCIQAAL--- 117

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRIL---ISPRIWALIISLPLLTILANFSAIIGASIVI 286
                M        +     +   I+   + P I  + I+  LL +    +      +  
Sbjct: 118 ----HMVNTR----LEHYQENPEAIILAQVLPIIVGMNIASLLLYVYLVSAIFFSFYLTF 169

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
                     F S   S+ TL ++   ++K   +   +G+ +    +   +    L K V
Sbjct: 170 HFMLGFTNNEFLSYVVSSTTLFDLIYSVVKTLILCIIVGLTSGYYYYEASIRHIYLRKAV 229

Query: 347 TTCVVQSISIVIIIDSLFAIFY 368
           +  + +    +II      + +
Sbjct: 230 SRILTRGSFWLIIASMYITLTF 251


>gi|149918279|ref|ZP_01906770.1| amino acid ABC transporter, ATP-binding protein [Plesiocystis
           pacifica SIR-1]
 gi|149820805|gb|EDM80214.1| amino acid ABC transporter, ATP-binding protein [Plesiocystis
           pacifica SIR-1]
          Length = 561

 Score = 68.7 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 69/214 (32%), Gaps = 6/214 (2%)

Query: 78  IEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVIS 137
              +   ++    +++  +K   +            +  K    ++       +   V++
Sbjct: 257 AAHVGDQMAERLGRELTPEKSDDARSKGLLARAAGSLASKASGALDAILGGLEVGPRVLA 316

Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ---FG 194
             G        F      ++RQ             ++S + G  +       L       
Sbjct: 317 QLGRALLRPRDFAEVFGPVLRQAL---WRPAAFFAVVSTLIGFTLLYILHRSLGGGELPL 373

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
                  L+  + +  +   L+ ++ A  S +AIVA +G M +  +  A+R +G+   R 
Sbjct: 374 RPDRVFSLIGSMHVIALAPPLSGILFAATSANAIVAWLGGMSLTRQTTALRALGIGESRY 433

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
           L  P    L+ +   L  L     + G  + +  
Sbjct: 434 LWVPAWLGLVGAYLALAALFTLGMLGGGVLYVVF 467


>gi|264677704|ref|YP_003277610.1| ABC transporter permease [Comamonas testosteroni CNB-2]
 gi|262208216|gb|ACY32314.1| ABC-type transport system ipermease component [Comamonas
           testosteroni CNB-2]
          Length = 267

 Score = 68.3 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 94/252 (37%), Gaps = 6/252 (2%)

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
           G+        + +    + L         + S   K     L +QM+      +     +
Sbjct: 12  GRIWAALGAQALAWWRSIYLTAVLLVLVSSPSSYRKRGRAMLAQQMFAQTAPILTGFTAL 71

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           + +  AVIA+        +G   +++DL+  + + E+  L  A+ +A R       ++  
Sbjct: 72  AALLCAVIARIVIVTAQSYGLSRYALDLVVRVMVIELIPLTAALFVAMRCTIPAGVQVVQ 131

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           M++  ++   +T G+D VR  + PR  A + +   L  L+   A++   + ++ +    F
Sbjct: 132 MRMQGQLAKWKTQGIDPVRAALVPRAAAGVFAAITLAALSCIVALVTVYLSVYGFSLAGF 191

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV------GVHSNSLGKKVTT 348
             +   F    T +     ++K  F +  + ++ +               +   G     
Sbjct: 192 GAYTRIFGQIFTPSLTLVFVLKTWFFSLTVAVMPLASAMYTPVARHRQGGAELGGFARMF 251

Query: 349 CVVQSISIVIII 360
            V+  I ++ ++
Sbjct: 252 AVLLLIEVISLM 263


>gi|299530299|ref|ZP_07043724.1| ABC-type transport system ipermease component [Comamonas
           testosteroni S44]
 gi|298721670|gb|EFI62602.1| ABC-type transport system ipermease component [Comamonas
           testosteroni S44]
          Length = 267

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 95/252 (37%), Gaps = 6/252 (2%)

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
           G+        + +    + L         + S   K     L +QM+      +     +
Sbjct: 12  GRIWAALGAQALAWWRSIYLTAVLLVLVMSPSSYQKHGRAMLAQQMFAQTAPILTGFTAL 71

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           + +  AVIA+        +G   +++DL+  + + E+  L  A+ +A R       ++  
Sbjct: 72  AALLCAVIARIVIVTAQSYGLSRYALDLVVRVMVIELIPLTAALFVAMRCTIPAGVQVVQ 131

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           M++  ++   +T G+D VR  + PR  A + +   L  L+   A++   + ++ +    F
Sbjct: 132 MRMQGQLAKWKTQGIDPVRAALVPRAAAGVFAAVTLAALSCIVALVTVYLSVYGFSLAGF 191

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV------GVHSNSLGKKVTT 348
           A +   F    T +     ++K  F +  + ++ +               +   G     
Sbjct: 192 AAYTRIFGQIFTPSLTLVFVLKTWFFSLTVAVMPLASAMYTPVARHRQGGAELGGFARMF 251

Query: 349 CVVQSISIVIII 360
            V+  I ++ ++
Sbjct: 252 AVLLLIEVISLM 263


>gi|221068184|ref|ZP_03544289.1| protein of unknown function DUF140 [Comamonas testosteroni KF-1]
 gi|220713207|gb|EED68575.1| protein of unknown function DUF140 [Comamonas testosteroni KF-1]
          Length = 267

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 94/252 (37%), Gaps = 6/252 (2%)

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
           G+        + +    + L         + S   K     L +QMY      +     +
Sbjct: 12  GRIWAALGAQALAWWRSIYLTAMLLVLISSPSSYQKHGRAMLAQQMYAQTAPILTGFTAL 71

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           + +  AVIA+        +G   +++DL+  + + E+  L  A+ +A R       ++  
Sbjct: 72  AALLCAVIARIVIVTAQSYGLSRYAMDLVVRVMVIELIPLTAALFVAMRCTIPAGVQVVQ 131

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           M+   ++   +T G+D VR  + PR  A + +   L  L+   A++   + ++ +    F
Sbjct: 132 MRTQGQLAKWKTQGIDPVRAALVPRAAAGVFAAVTLAALSCIVALVTVYLSVYGFSLAGF 191

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV------GVHSNSLGKKVTT 348
           A +   F    T +     ++K  F +  + ++ +               +   G     
Sbjct: 192 AAYTRIFGQIFTPSLTLVFVLKTWFFSLTVAVMPLASAMYTPVARHRQGGAELGGFARMF 251

Query: 349 CVVQSISIVIII 360
            V+  I ++ ++
Sbjct: 252 AVLLLIEVISLM 263


>gi|99034269|ref|ZP_01314324.1| hypothetical protein Wendoof_01000880 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 55

 Score = 68.0 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 22/52 (42%)

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           KA      I + +   G+     +  +G   T+ VV S  ++I+ + +  + 
Sbjct: 2   KATAFGAIISVSSCYYGYHCKEGARGVGVATTSTVVLSSILIILANYMITLI 53


>gi|152982121|ref|YP_001353647.1| ABC-type transport system, permease component [Janthinobacterium
           sp. Marseille]
 gi|151282198|gb|ABR90608.1| ABC-type transport system, permease component [Janthinobacterium
           sp. Marseille]
          Length = 271

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 86/222 (38%), Gaps = 3/222 (1%)

Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
                    G   V ++           +V+S T    + +   +    ++  Q+     
Sbjct: 6   PVPQTIVRTGGAAVGWLLGGWRILLFGVIVLSLT---FSPTTYKREHRYAIAHQLVLGTS 62

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
           + +    L+S +   ++ +        +G   +++D++  + + E+  L  A+ +A R  
Sbjct: 63  TNLIWFSLLSSLISVILIRIVMVTALSYGLSKYALDMVVRMLVLELIPLTAALFVALRRT 122

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
                E+  M+   ++ A+R  G+D +R    PR  A I S+ +L  ++   A+I   + 
Sbjct: 123 LPDGVELAEMRRRGDLLAMRQQGVDPIRTEFFPRAIAGIFSVWMLAAVSCVLALILTYLS 182

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327
           I+ +     A +          +     L+K  F + A+ ++
Sbjct: 183 IYGFTQWALADYTRVVGQIFNPSVSMIFLLKTLFFSLAVSLI 224


>gi|330875117|gb|EGH09266.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 113

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 49/105 (46%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           ++      +     +LG                      L+RQ+Y VGV  + ++++   
Sbjct: 9   RVRLLGRSAIDIVTVLGRSGLFLVNALLGRGGAGSSFQLLVRQLYSVGVMSLVIIVVSGM 68

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221
             G V+A QG   L+++G+E     ++++  LRE+G ++TA++ A
Sbjct: 69  FIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFA 113


>gi|330826019|ref|YP_004389322.1| hypothetical protein Alide2_3477 [Alicycliphilus denitrificans
           K601]
 gi|329311391|gb|AEB85806.1| protein of unknown function DUF140 [Alicycliphilus denitrificans
           K601]
          Length = 278

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 76/191 (39%), Gaps = 1/191 (0%)

Query: 145 SSYKFKGFLLS-LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203
           S   ++      L RQM       +     ++ +   VI          +G   ++++++
Sbjct: 49  SPSSYRPAARERLARQMLADTAPILLGFTALAALLSLVITHIVVVTALSYGLTRYALEMV 108

Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263
             + + E+  L  A+ +A R+      ++  ++    + A+R  G D VR+ + PR+ A 
Sbjct: 109 IRVLVLELIPLTAALFVAMRTTIPSGVQLARLRQTGRLQALRERGADPVRMELLPRVLAG 168

Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323
           + +   L  L+   A++ A + ++ +       +   F    T +      +K    + A
Sbjct: 169 VHASITLAALSCAVALVMAYLGVYGFNTAGLPAYTRMFGQVFTPSITLVFALKTLLFSLA 228

Query: 324 IGIVAMKEGFA 334
           + ++ M  G  
Sbjct: 229 VALIPMASGLY 239


>gi|319762168|ref|YP_004126105.1| hypothetical protein Alide_1457 [Alicycliphilus denitrificans BC]
 gi|317116729|gb|ADU99217.1| protein of unknown function DUF140 [Alicycliphilus denitrificans
           BC]
          Length = 271

 Score = 66.4 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 76/191 (39%), Gaps = 1/191 (0%)

Query: 145 SSYKFKGFLLS-LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203
           S   ++      L RQM       +     ++ +   VI          +G   ++++++
Sbjct: 42  SPSSYRPAARERLARQMLADTAPILLGFTALAALLSLVITHIVVVTALSYGLTRYALEMV 101

Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263
             + + E+  L  A+ +A R+      ++  ++    + A+R  G D VR+ + PR+ A 
Sbjct: 102 IRVLVLELIPLTAALFVAMRTTIPSGVQLARLRQTGRLQALRERGADPVRMELLPRVLAG 161

Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323
           + +   L  L+   A++ A + ++ +       +   F    T +      +K    + A
Sbjct: 162 VHASITLAALSCAVALVMAYLGVYGFNTAGLPAYTRMFGQVFTPSITLVFALKTLLFSLA 221

Query: 324 IGIVAMKEGFA 334
           + ++ M  G  
Sbjct: 222 VALIPMASGLY 232


>gi|163792925|ref|ZP_02186901.1| sulfate transport ATP-binding protein cysA [alpha proteobacterium
           BAL199]
 gi|159181571|gb|EDP66083.1| sulfate transport ATP-binding protein cysA [alpha proteobacterium
           BAL199]
          Length = 528

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 48/324 (14%), Positives = 106/324 (32%), Gaps = 27/324 (8%)

Query: 55  AELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI 114
           A+ ++    + H  ++L   +  +E+    I           + +      +   +    
Sbjct: 214 ADRVLMLDPRRHALVELPANARRVERELEAIEAV-AVPFDEMRAEPLAPEKATATIAVSA 272

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
           G                L   +    E C S              + +VG+  V V  + 
Sbjct: 273 GPMRASAAWRLSWTLRFLAGYLW---ELCFSP-----------SALLFVGLGSVIVGFVT 318

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           ++             L        ++  ++  +LR +  L T V+IA R+ + I A+IG 
Sbjct: 319 TWFI---FQYLPFRDLLMPIIHSDALAGLAFSELRVLAPLTTGVLIATRNTALIGADIGH 375

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
              +++I ++R + +     L    + A  ++  +L I++       A +  W Y     
Sbjct: 376 KVYSDQIKSMRNLNIPHDVYLTGTVLVASAVASVVLVIMSECLTTWVA-MATWSYIFPDE 434

Query: 295 AVFF---SRFHSTATLANIFT---GLI--KAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
           + +      F        +     G I  KA         +A+  G+        + + +
Sbjct: 435 STYMWRDQYFQRMWPPGELIMDGTGWIAAKAIPSIVGAAGIALYFGYRPKSTVVDINQSI 494

Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370
              ++  +S V+I  S   +  F 
Sbjct: 495 AQALIWGLSFVLIWQSALTLIEFK 518


>gi|241764467|ref|ZP_04762489.1| protein of unknown function DUF140 [Acidovorax delafieldii 2AN]
 gi|241366102|gb|EER60693.1| protein of unknown function DUF140 [Acidovorax delafieldii 2AN]
          Length = 266

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 87/218 (39%), Gaps = 2/218 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           + ++    +  +   LG V+       + S   +    +L R +Y      +    +++ 
Sbjct: 16  RTLRRWALAWGRIVYLGAVVLVL--VLSPSSYTRSARATLARHVYLDTAPILTGFTVLAA 73

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
           +   VI +        +G   ++++++  + + E+  L   + +A R       ++  ++
Sbjct: 74  LLCLVITRIVVVTALSYGLSRYALEMVIRVLVLELIPLTATLFVAMRCTIPAGTQLALLR 133

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
            +   DA+R  G D VR+ + PR+ A + +   L  L+   A++ A + ++ +       
Sbjct: 134 QSGRFDALRAHGGDPVRMELLPRVAAGVFASITLAALSCVVALVMAYLSVYGFNLAGLPS 193

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
           +   F    + A      +K  F + A+ ++    G  
Sbjct: 194 YTRMFGHVFSPAVTLVFSLKTLFSSLAVALIPTTAGMY 231


>gi|153006504|ref|YP_001380829.1| hypothetical protein Anae109_3665 [Anaeromyxobacter sp. Fw109-5]
 gi|152030077|gb|ABS27845.1| hypothetical protein Anae109_3665 [Anaeromyxobacter sp. Fw109-5]
          Length = 160

 Score = 61.4 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 47/161 (29%), Gaps = 17/161 (10%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61
           E+G    R +G+W    I  +   +         +            +DT GA L+    
Sbjct: 12  EDGA--VRCSGSWTIDRIGRVERALRGLAWPRGAAVVVDASAVG--SMDTAGAWLLKRTA 67

Query: 62  --MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
             +E+    + L+ +    E L  +++ +       +   R         +    G+   
Sbjct: 68  RGLERSGRTVTLR-LRPEHEALLEVVTSSGVVAAPPRARDRP-------RVLATFGRGAW 119

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
           K   +        G +            + +     +++ +
Sbjct: 120 KAARELGGLVTFFGEITVTAARARTGPLRVR--WRQVLQHV 158


>gi|160898358|ref|YP_001563940.1| ABC-type transport system permease [Delftia acidovorans SPH-1]
 gi|160363942|gb|ABX35555.1| ABC-type transport system ipermease component [Delftia acidovorans
           SPH-1]
          Length = 267

 Score = 60.6 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 81/205 (39%), Gaps = 4/205 (1%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMY-YVGVSGVPVVILISFVTGAVIAQQGAFQL 190
           LG V+       + S   +G   ++  Q+Y   G   +    L + +   +        L
Sbjct: 31  LGAVLLVL--AMSPSSYRRGARRAMAHQIYVQTGPILLGFTALAALLCAVITRIVIVTAL 88

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
           S +G   ++++++  + + E+  L  A+ +A R        I  ++   ++ A +  G D
Sbjct: 89  S-YGLSRYALEMVVRVLVIELIPLTAALFVAMRCTIPNGTLIAQLRARGQLQAWQERGSD 147

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
            +R+ + PR    + +   L +L+   A++   + ++ +       +   F    T A  
Sbjct: 148 PLRMALVPRAAGGVFASVTLAVLSCVVALVTVYLSVYGFTLAGLPGYTRIFGQIFTPAVT 207

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAV 335
              ++K  F +  + I+ M  G   
Sbjct: 208 LVFVLKTWFFSLTVAIMPMASGLYA 232


>gi|239943303|ref|ZP_04695240.1| putative YrbE family protein [Streptomyces roseosporus NRRL 15998]
          Length = 73

 Score = 60.6 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 31/73 (42%)

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG+  ++ L+ PR+ A ++   LL  L +    +G         D     + + F +
Sbjct: 1   MEVMGVSPIQRLVVPRVLATMLVAVLLNGLISVVGTLGGYFFNVIMQDGTPGAYLASFSA 60

Query: 304 TATLANIFTGLIK 316
            A L +++    K
Sbjct: 61  LAQLPDLYISEFK 73


>gi|148823177|ref|YP_001287931.1| integral membrane protein YrbE3a [Mycobacterium tuberculosis F11]
 gi|148721704|gb|ABR06329.1| hypothetical integral membrane protein yrbE3A [Mycobacterium
           tuberculosis F11]
          Length = 132

 Score = 60.3 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 48/120 (40%), Gaps = 4/120 (3%)

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
           G+     +    +      + +  +       + ++ +LL    Q ++V        +L+
Sbjct: 14  GRVADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLL----QCWFVARVSTLPGVLM 69

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           +     +        L+  GA  FS    +I  + +   ++T +++AG   +A+ A++G+
Sbjct: 70  TIPWAVISGFLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGA 129


>gi|108798622|ref|YP_638819.1| hypothetical protein Mmcs_1653 [Mycobacterium sp. MCS]
 gi|108769041|gb|ABG07763.1| conserved hypothetical protein [Mycobacterium sp. MCS]
          Length = 116

 Score = 58.7 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 33/107 (30%)

Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323
           +I +  L  +A   +     ++   +Y     VF   F +      +F         A  
Sbjct: 1   MIVVVPLYCVALLMSFFSVRVITTAFYGQGSGVFDHYFDTFLNPQAVFFSFAVTVAAALV 60

Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           I ++    G         +G+ V      S+    ++  L  +  + 
Sbjct: 61  IMLIHTYYGLNATGGPAGVGEAVGRATRTSLIASQMVILLVTLALYG 107


>gi|329903553|ref|ZP_08273548.1| ABC-type transport system ipermease component [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327548291|gb|EGF32984.1| ABC-type transport system ipermease component [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 239

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 73/197 (37%), Gaps = 1/197 (0%)

Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190
           +  L         + S  ++       R +Y      +P   ++S +   VI        
Sbjct: 1   MFYLGAIALVMALSPSSYYRANRAVTSRYIYTSTWQVLPWFTMLSALVCQVIIHIVVVTA 60

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
             +G   ++++++  + + E+  L  A+ +A RSG A  A   ++    E D +  + + 
Sbjct: 61  ISYGLSQYALEMVVRVLVLELIPLSAALFVALRSGLAFDAS-TALPSRVEPDNLSRIDIK 119

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
            +R    P++ A   ++  L ++++   +I A I ++ +       +             
Sbjct: 120 RLRNEFVPQVIASAFAVISLAMISSVIVLILAYINVYGFLPWGLVDYTRTVGRVFDPIVT 179

Query: 311 FTGLIKAPFMACAIGIV 327
               +K      ++ ++
Sbjct: 180 IGFALKTLLFGLSVAVI 196


>gi|298292174|ref|YP_003694113.1| ABC transporter [Starkeya novella DSM 506]
 gi|296928685|gb|ADH89494.1| ABC transporter related protein [Starkeya novella DSM 506]
          Length = 506

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 88/246 (35%), Gaps = 20/246 (8%)

Query: 141 EFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL-ISFVTGAVIAQQGAFQLSQFGA---- 195
                 +  + F        + +  S   +  L +       ++    F    FG     
Sbjct: 262 RSMRGGHPLRWFARYFAEYFWVLCASPFMLAYLGLGGAILGFVSMWFGFNYHSFGGYLKS 321

Query: 196 --EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
                ++  +  +Q      L+ ++++  R+ + I A++G+  ++ ++ A+R + +  +R
Sbjct: 322 ILHDETLAGIGFVQTTISVPLIASILVVARNSAVICADLGNRTLSAQLPAMRNLAIPGLR 381

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF--SRFHSTAT----- 306
            L+     A  +SL LLT+ A  +A   A      ++      F+  + F          
Sbjct: 382 YLVVSIFVANTLSLSLLTVAALATASWAALQTWQVFFPDQPMEFWQENYFRRLIEAGPAL 441

Query: 307 ---LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              L  +   +  +  +     I     G    +   S+   +   +V  +S+ ++  + 
Sbjct: 442 YAQLGWVGAKIALSSLLGSGAAI---LIGLRPKLSVVSINNAIAKAIVIGVSLTLLSHAF 498

Query: 364 FAIFYF 369
           FAI  F
Sbjct: 499 FAILQF 504


>gi|171056704|ref|YP_001789053.1| ABC-type transport system ipermease [Leptothrix cholodnii SP-6]
 gi|170774149|gb|ACB32288.1| ABC-type transport system ipermease component [Leptothrix cholodnii
           SP-6]
          Length = 249

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 70/165 (42%), Gaps = 1/165 (0%)

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
            G + +   +L + ++  VI       LS +G   ++++++  + + E+  L  A+  A 
Sbjct: 43  TGPALLGFTVLTTLISLVVIRIVLVTALS-YGLSQYALEMVVRVLVLELIPLAAALFAAL 101

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           R      AEI +++  +  DA    GL  +R  + PR+ A +    L+  ++    ++ A
Sbjct: 102 RCTIPNAAEIAALRARDGWDAWSPQGLQRLRSEVLPRMAASVFCALLMAAVSCVVTLVVA 161

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327
            ++++ +    F  +        + A      +K  F    + ++
Sbjct: 162 YLLVYGFTSAGFGAYTHTVGRVFSPAVALIFGLKIVFFGLTVALM 206


>gi|169629235|ref|YP_001702884.1| hypothetical protein MAB_2149 [Mycobacterium abscessus ATCC 19977]
 gi|169241202|emb|CAM62230.1| Hypothetical protein MAB_2149 [Mycobacterium abscessus]
          Length = 217

 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 69/202 (34%), Gaps = 18/202 (8%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
            +S TG    ++      +    RQ   +    V  + +++     +I       +  FG
Sbjct: 34  FLSMTGGVLVAALTRPPAVREFFRQAGAIARVSVLPMCMVAIPLAVLIVLVLEALV--FG 91

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
              F                   ++ A    + + AE  S +I  +I A+R+ G+D    
Sbjct: 92  PTGF--------------PTHAVLVAAAAGATVVFAEADSARIQRDIGAMRSRGIDITHG 137

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
            + PR+ A  ++   L  +A   A  G           P ++F        +  NI   +
Sbjct: 138 FVVPRVLATAVAAVPLAFIA--VAAAGVYFFSAFGKHTPLSLFIGNLLQLMSPLNILIVV 195

Query: 315 IKAPFMACAIGIVAMKEGFAVG 336
           I+A  +    G++A   G    
Sbjct: 196 IEAASLGLIAGLIACYRGATAT 217


>gi|311742619|ref|ZP_07716428.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
 gi|311314247|gb|EFQ84155.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
          Length = 116

 Score = 55.2 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 39/105 (37%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G   + +G      +  +      + Q +++        +L++     VI  
Sbjct: 6   FVRTLSTFGDFYTFSGNVFRQMFTRRFQFREFVSQAWFITTVSFGPALLVAIPFCVVIIF 65

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           Q    L Q GA   +    ++  +REIG +++ +++AG     + 
Sbjct: 66  QVNQLLIQIGAVDLAGAGAAVAVVREIGPIVSVLVVAGAGPGTVT 110


>gi|89900018|ref|YP_522489.1| ABC-type transport system permease [Rhodoferax ferrireducens T118]
 gi|89344755|gb|ABD68958.1| ABC-type transport system ipermease component [Rhodoferax
           ferrireducens T118]
          Length = 266

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 79/213 (37%), Gaps = 3/213 (1%)

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
           G+ +++         H LG ++       + S   +       R +Y      +P    +
Sbjct: 15  GRALLRGAASWWQMIH-LGAIVLVL--ALSPSTYNRINRAITSRHIYASTWQVLPWFTAM 71

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           + +   V+ +        +G   +++ ++  + + E+  L  A+ +A R+G    A   +
Sbjct: 72  AALFSLVLIRIVVVTALNYGLSQYALQMVVRVLVLELIPLSAALFVALRAGMTFNAGAQT 131

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
                  D    + L  +R  + PR+ A   S+  L ++ +   ++ A ++++       
Sbjct: 132 NARPSPFDPSAPLSLTRLRADVVPRVLAGAFSVLTLAMINSVIVLVLAYLIVYGLSPWGL 191

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327
             +         L+      +K  F + A+ +V
Sbjct: 192 PGYTRTVGHVFDLSVTLGFALKTVFFSLAVAVV 224


>gi|304309830|ref|YP_003809428.1| predicted sulfate transporter/antisigma-factor antagonist STAS
           [gamma proteobacterium HdN1]
 gi|301795563|emb|CBL43761.1| predicted sulfate transporter/antisigma-factor antagonist STAS
           [gamma proteobacterium HdN1]
          Length = 114

 Score = 53.3 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 38/106 (35%), Gaps = 6/106 (5%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G    R  G      +++    ++  +       S +VDLS +TE DT G +L++    
Sbjct: 10  DGGCKIRPEGELTIYRVADYKPQLIQVLES---HPSIVVDLSRVTEFDTAGLQLLILLKR 66

Query: 64  KYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106
           +   +       G S  + +LF L             PQ      +
Sbjct: 67  EAKARGITSSFTGHSAEVTELFQLFDMVPYFGDPLVMPQDDSSRRA 112


>gi|270156845|ref|ZP_06185502.1| putative ABC transport system permease protein [Legionella
           longbeachae D-4968]
 gi|289164714|ref|YP_003454852.1| ABC transporter (permease) [Legionella longbeachae NSW150]
 gi|269988870|gb|EEZ95124.1| putative ABC transport system permease protein [Legionella
           longbeachae D-4968]
 gi|288857887|emb|CBJ11742.1| putative ABC transporter (permease) [Legionella longbeachae NSW150]
          Length = 252

 Score = 52.9 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 79/227 (34%), Gaps = 13/227 (5%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   +G   V  +         +G +  +         + +  LL+++R +YY GV  V 
Sbjct: 3   VLNKLGVYFVGLVYSFILFLRFMGHLYCSLINMLMG--RLRLSLLNIVRTIYYAGVKLVI 60

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
             + IS   G  +  +    L+ +  +     +   +   ++   +  V++  +     +
Sbjct: 61  PFMFISTFLGISMVMKVNSILTPYNLQRDGRLIAQNILTHDLVPFIIGVLLCIQCALNFI 120

Query: 230 AEIGSMKINEEIDAIRTMGLD--FVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
               ++K+NEE      + +    V   I P +  + I+  LL   A  +  I   +   
Sbjct: 121 ----NVKVNEE-----DLNVPQQVVVNHILPVLIGINIAGGLLYAYAIAAFFISIYVTYQ 171

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
            +      V   R  +  TL ++   ++K       + +      + 
Sbjct: 172 YFLYTNLYVPMIRILTAITLYDVVYSILKTTLYCTIVSLTIGYYYYD 218


>gi|239981272|ref|ZP_04703796.1| hypothetical protein SalbJ_17681 [Streptomyces albus J1074]
 gi|291453129|ref|ZP_06592519.1| predicted protein [Streptomyces albus J1074]
 gi|291356078|gb|EFE82980.1| predicted protein [Streptomyces albus J1074]
          Length = 127

 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/100 (13%), Positives = 34/100 (34%), Gaps = 3/100 (3%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G    R AG         +  +V   + +        +D + +T  D++G   ++    +
Sbjct: 28  GTLALRLAGALDHESADALVREVARRLAERPAPRLLRLDCAGLTACDSLGLSALLMIGRR 87

Query: 65  YHG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
                  ++L     H+++L  +           ++P  +
Sbjct: 88  TGAAACALRLDRRPPHLDRLLEITGTHGYLVGPGEEPGPA 127


>gi|315927604|gb|EFV06935.1| conserved hypothetical protein [Campylobacter jejuni subsp.
          jejuni DFVF1099]
          Length = 114

 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 38/92 (41%), Gaps = 6/92 (6%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
               G W    I ++     +A+   IQS   I D   +  IDT G    +     ++ 
Sbjct: 11 TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKN 67

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96
           + KI  +G+++  + LF L    +++  K +
Sbjct: 68 KNIKITKEGLNSRFQTLFELCEKNYQRLGKTK 99


>gi|171060467|ref|YP_001792816.1| anti-sigma-factor antagonist [Leptothrix cholodnii SP-6]
 gi|170777912|gb|ACB36051.1| anti-sigma-factor antagonist [Leptothrix cholodnii SP-6]
          Length = 110

 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 11/107 (10%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60
           +     R  G       +E+   ++       +  +  +DLS +T+IDT G +L+M    
Sbjct: 9   DAPRTLRIQGELSIFRATELKQALLA------EPAATEIDLSGVTDIDTAGLQLLMLAKK 62

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSL--ISFTHRKKIKNQKPQRSFFYN 105
              +   +++L G S  + +LF L  I+      +    P R   + 
Sbjct: 63  HARRSGREVRLVGHSPAVIELFELLHIAGHFGDPMVIDAPARDAPHR 109


>gi|315125514|ref|YP_004067517.1| anti-sigma B factor antagonist [Pseudoalteromonas sp. SM9913]
 gi|315014027|gb|ADT67365.1| anti-sigma B factor antagonist [Pseudoalteromonas sp. SM9913]
          Length = 97

 Score = 50.6 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 6/80 (7%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG-AELIMYFME--K 64
            R +G      I     + ++   +  +  +   DLS +T +DT G A LI  F E  +
Sbjct: 13 HLRVSGELTHNSIGN---ERLLNTKRQTEHKTLYFDLSEVTRVDTAGLAWLIHSFTEFKQ 69

Query: 65 YHGKIKLQGVSTHIEQLFSL 84
             +++LQ     ++ L  L
Sbjct: 70 QGIRLELQNPPEQLQNLMQL 89


>gi|119855026|ref|YP_935631.1| ABC-type transport system involved in resistance to organic
           solvents permease component-like protein [Mycobacterium
           sp. KMS]
 gi|119697744|gb|ABL94816.1| ABC-type transport system involved in resistance to organic
           solvents permease component-like protein [Mycobacterium
           sp. KMS]
          Length = 206

 Score = 50.6 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 42/102 (41%), Gaps = 4/102 (3%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           VK +        +  + +          ++++ FLL    Q ++V    +   + +S   
Sbjct: 19  VKALKPLSIIGGLYAMTLDMFVAMVKPPFQWREFLL----QTWFVARVSMVPALTLSIPL 74

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
             + +      L++FGA  FS    ++  + +IG  +T +++
Sbjct: 75  VVLTSFTFNTLLAEFGAADFSGTGAALGAVNQIGPFVTVLVV 116


>gi|52425764|ref|YP_088901.1| hypothetical protein MS1709 [Mannheimia succiniciproducens MBEL55E]
 gi|52307816|gb|AAU38316.1| unknown [Mannheimia succiniciproducens MBEL55E]
          Length = 120

 Score = 50.2 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 33/101 (32%), Gaps = 13/101 (12%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKS-------IQSDSAIVDLSAITEIDTIG 54
             +    FR  G      +  + ++      +S       I   +   DLS ++ ID+ G
Sbjct: 13  QNDDRIAFRLDGELSRDTLLPLWNEFQKREQRSSFLSERQIADKNISWDLSQVSRIDSAG 72

Query: 55  AELIMYFM------EKYHGKIKLQGVSTHIEQLFSLISFTH 89
             L+   +      +     + L+ V   +  L  L+    
Sbjct: 73  FALLCDLLHYCQAKKNADKTLLLENVPPQLLTLADLVGLAD 113


>gi|288960908|ref|YP_003451247.1| ABC transporter related [Azospirillum sp. B510]
 gi|288913216|dbj|BAI74703.1| ABC transporter related [Azospirillum sp. B510]
          Length = 500

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/245 (10%), Positives = 84/245 (34%), Gaps = 26/245 (10%)

Query: 143 CASSYKFKGFLLSLIRQMYYVGVSGVPVV-----ILISFVTGAVIAQQ----GAFQLSQF 193
                +F  FL  L    + + +S + ++      LI               G +  S  
Sbjct: 260 VGHRSRFHWFLRYLAEYFWELCISPLMLIYMGSGALIMGFVSMWFGFHYNSFGGYLKSLL 319

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
             E      +    +     L+++++   R+ + I A++G+  ++ +  A++ + +    
Sbjct: 320 HDETLVGLGLVQATV--AVPLISSILFVARNNAIIAADMGNRVLSSQFSAMQNLRITARG 377

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP------FAVFFSRFHSTATL 307
            + S  +  +++   +L +++   A   +       + +          F          
Sbjct: 378 YIFSAILINMVVGSLILLVISLGMASWASMQTWHVQFPMQNFELWRGHFFRKLLPDGIHP 437

Query: 308 AN-IFTGLIK----APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           +  +   L+K    +    CA  ++   +          +   +   ++  +++ +++ +
Sbjct: 438 STGMLWVLLKVALSSLLAGCAAIVIGCGK----KESVLEINAAIARSIIVGVTLTLLVHA 493

Query: 363 LFAIF 367
           + +I 
Sbjct: 494 IISIL 498


>gi|77361455|ref|YP_341030.1| anti-sigma B factor antagonist [Pseudoalteromonas haloplanktis
          TAC125]
 gi|76876366|emb|CAI87588.1| putative anti-sigma B factor antagonist [Pseudoalteromonas
          haloplanktis TAC125]
          Length = 97

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 6/80 (7%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG-AELIMYFME--K 64
           FR +G      I +       AI K         DLS ++ +DT G A LI  F +  +
Sbjct: 13 HFRVSGELTRSSIGDEKGLGSQAITK---HKICYFDLSDVSRVDTAGLAWLIHTFAQYKQ 69

Query: 65 YHGKIKLQGVSTHIEQLFSL 84
             +++LQ     ++ L  L
Sbjct: 70 QGIRLELQNPPEQLQNLMQL 89


>gi|261364832|ref|ZP_05977715.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996]
 gi|288566870|gb|EFC88430.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996]
          Length = 92

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              +G+     ++  AD       +    D+  VDLS +   D+    L++  + +  G
Sbjct: 9  TLHISGDITVKTLT--ADAFTRFRQQCRLKDTHAVDLSGVGRADSACVSLLLDALRRPDG 66

Query: 68 KIKLQGVSTHIEQLFSLIS 86
          KI LQG+   +  L  L  
Sbjct: 67 KITLQGIPESVRTLSELYE 85


>gi|260428392|ref|ZP_05782371.1| membrane protein [Citreicella sp. SE45]
 gi|260422884|gb|EEX16135.1| membrane protein [Citreicella sp. SE45]
          Length = 83

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 31/75 (41%)

Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
                 +  ++   +    +  +  +G   +PVV + +  TG  +A Q     ++F AE 
Sbjct: 4   FAARAASHIFRAPFYGREALNALLQIGWLSLPVVGMTALFTGGALALQIYSGGARFSAEA 63

Query: 198 FSIDLMSILQLREIG 212
               +++I  +R+  
Sbjct: 64  VVPQIVAIGMVRDWA 78


>gi|288941305|ref|YP_003443545.1| anti-sigma-factor antagonist [Allochromatium vinosum DSM 180]
 gi|288896677|gb|ADC62513.1| anti-sigma-factor antagonist [Allochromatium vinosum DSM 180]
          Length = 108

 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 38/80 (47%), Gaps = 6/80 (7%)

Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK-- 68
           +G+     ++E  + +   + +    +   +DLS ITE+D  G +L+++  E    +  
Sbjct: 15 LSGDLTIYTVAETLNRLRPHLGEHPTGE---LDLSGITELDGAGIQLLLWLRETARLRGI 71

Query: 69 -IKLQGVSTHIEQLFSLISF 87
           ++L    + ++++  L+  
Sbjct: 72 TLRLSAHGSVVDEVLDLLQL 91


>gi|255067846|ref|ZP_05319701.1| conserved hypothetical protein [Neisseria sicca ATCC 29256]
 gi|255047937|gb|EET43401.1| conserved hypothetical protein [Neisseria sicca ATCC 29256]
          Length = 92

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              +G+     ++  A        +    D+  VDLS +   D+    L++  + + +G
Sbjct: 9  TLHISGDVTVKTLTAAAFTRFRQQCRL--KDTRAVDLSGVGRADSACVSLLLDALRRPNG 66

Query: 68 KIKLQGVSTHIEQLFSLIS 86
          KI LQG+   +  L  L  
Sbjct: 67 KISLQGIPESVRTLSELYE 85


>gi|255020162|ref|ZP_05292231.1| hypothetical protein ACA_0899 [Acidithiobacillus caldus ATCC 51756]
 gi|254970304|gb|EET27797.1| hypothetical protein ACA_0899 [Acidithiobacillus caldus ATCC 51756]
          Length = 114

 Score = 47.9 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/97 (14%), Positives = 39/97 (40%), Gaps = 5/97 (5%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            E+  +V R +G+W+   +    + +     +S+  D   +D   +   D+    L++ +
Sbjct: 13  QEDDQSVLRLSGDWRLDALD---EALRSEELRSLAVDRVRLD--DVDAADSATLALLLDW 67

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
            E+   + +   ++     L  L+     + +  + P
Sbjct: 68  QERALQRKRPLVLTGLGPGLRELVHLYGLEALLTEAP 104


>gi|283853373|ref|ZP_06370620.1| anti-sigma-factor antagonist [Desulfovibrio sp. FW1012B]
 gi|283571241|gb|EFC19254.1| anti-sigma-factor antagonist [Desulfovibrio sp. FW1012B]
          Length = 258

 Score = 47.5 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 48/99 (48%), Gaps = 9/99 (9%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQS--DSAIVDLSAITEIDTIGAELIMY 60
           E+G T+ R AG+     ++ + D++   + + +Q      ++DLS +  ID++G  L++ 
Sbjct: 164 EDGQTILRPAGD----IVASVTDELRTRLKEIMQGNPGPLVIDLSRVELIDSVGIGLLIA 219

Query: 61  F---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96
               + K  G++ L+ V+  +  L   +       ++N 
Sbjct: 220 AHNTLSKKGGRLTLRHVNPDLASLLRTMRLDKHFAVENA 258


>gi|119469176|ref|ZP_01612160.1| putative anti-sigma B factor antagonist [Alteromonadales
          bacterium TW-7]
 gi|119447428|gb|EAW28696.1| putative anti-sigma B factor antagonist [Alteromonadales
          bacterium TW-7]
          Length = 97

 Score = 47.5 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 10/81 (12%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIV--DLSAITEIDTIG-AELIMYF--ME 63
          FR +G     E+S  +      +NK +Q+    +  DLS ++ +DT G A LI  F  ++
Sbjct: 14 FRASG-----ELSRNSIGDEQLLNKQLQTKHKTIYFDLSGVSRVDTAGLAWLIHSFAELK 68

Query: 64 KYHGKIKLQGVSTHIEQLFSL 84
          +   +++LQ     ++ L  L
Sbjct: 69 QQGIRLELQNPPEQLQNLMQL 89


>gi|251793146|ref|YP_003007874.1| hypothetical protein NT05HA_1442 [Aggregatibacter aphrophilus
          NJ8700]
 gi|247534541|gb|ACS97787.1| conserved hypothetical protein [Aggregatibacter aphrophilus
          NJ8700]
          Length = 119

 Score = 47.5 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 24/61 (39%), Gaps = 1/61 (1%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVM-AINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          +G    + +G      +  +        +       + + DL+ IT ID+ G  L+  F+
Sbjct: 15 DGKMTLQLSGELSRNTLLPLWQQRASFLLEGQSSGQTILWDLTQITRIDSAGFALLCEFL 74

Query: 63 E 63
          +
Sbjct: 75 Q 75


>gi|302538621|ref|ZP_07290963.1| anti-sigma factor antagonist [Streptomyces sp. C]
 gi|302447516|gb|EFL19332.1| anti-sigma factor antagonist [Streptomyces sp. C]
          Length = 132

 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/95 (11%), Positives = 31/95 (32%), Gaps = 3/95 (3%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G      +G+        + + V   + +     +  +D +A++ +D+ G   ++    +
Sbjct: 8   GTGRIELSGDLDHHHAGLLVEAVDRLLAEQPGLRALRLDCAALSAVDSSGLAALLMVRRR 67

Query: 65  ---YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96
                  + L G    + +L  +    H       
Sbjct: 68  TDTAGAGLHLDGRPVQLNRLLEITGTLHHLTAPRP 102


>gi|223986125|ref|ZP_03636148.1| hypothetical protein HOLDEFILI_03456 [Holdemania filiformis DSM
           12042]
 gi|223961930|gb|EEF66419.1| hypothetical protein HOLDEFILI_03456 [Holdemania filiformis DSM
           12042]
          Length = 167

 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           + ++   +F F G+  +  I +I  DV+  I++ +Q+     D   +T ID+ G   ++ 
Sbjct: 62  IQQDDALIFAFCGDLDNLSILKIKADVIREIDR-VQAPVVKFDFKDVTFIDSTGIGFLLA 120

Query: 61  F---MEKYHGKIKLQGVSTHIEQLFSL 84
               ++ Y G++ L+ +S  I +LF+L
Sbjct: 121 RYNQVQSYRGELILKNISPAIRRLFAL 147


>gi|261868150|ref|YP_003256072.1| putative NTP binding protein, contains STAS domain
          [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|261413482|gb|ACX82853.1| putative NTP binding protein, contains STAS domain
          [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 111

 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 30/89 (33%), Gaps = 3/89 (3%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVM-AINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
            +     R  G      +  +        + +  ++     DLS +  ID+ G  L+  
Sbjct: 13 QHDDKITLRLKGELSQNTLLPLWQQRASFLLARKTETLDVHWDLSQVNRIDSAGFALLCD 72

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
          F+ +   K  LQ   + +  L  L   + 
Sbjct: 73 FLNE--RKQLLQNPPSQLLTLADLFGLSD 99


>gi|167950503|ref|ZP_02537577.1| hypothetical protein Epers_30421 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 50

 Score = 46.8 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/35 (42%), Positives = 25/35 (71%)

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
           LSQFGAE     +++   +RE+G ++TA++ AGR+
Sbjct: 2   LSQFGAEESLGVMVAASLVRELGPVVTALLFAGRA 36


>gi|296104904|ref|YP_003615050.1| STAS domain-containing protein [Enterobacter cloacae subsp.
          cloacae ATCC 13047]
 gi|295059363|gb|ADF64101.1| STAS domain-containing protein [Enterobacter cloacae subsp.
          cloacae ATCC 13047]
          Length = 97

 Score = 46.4 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 8/80 (10%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EK 64
            + +G      ++ + D    A+         ++DLS +T +DT G  L+ + +   +K
Sbjct: 13 TLKLSGELDQDLLNPLWDKRHDAMQ-----GVTLIDLSGVTRVDTAGVALLAHLIAVGKK 67

Query: 65 YHGKIKLQGVSTHIEQLFSL 84
              + L G S ++  L  L
Sbjct: 68 QGATVTLHGASDNVVTLAQL 87


>gi|152978466|ref|YP_001344095.1| anti-sigma-factor antagonist [Actinobacillus succinogenes 130Z]
 gi|150840189|gb|ABR74160.1| anti-sigma-factor antagonist [Actinobacillus succinogenes 130Z]
          Length = 116

 Score = 46.4 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 4/91 (4%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAIN-KSIQSDSAIVDLSAITEIDTIGAELIM 59
           +  +     +  G      +  +       ++ K I   + I DLS IT ID+ G  L+ 
Sbjct: 12  VQNDDRMTLQLIGELSRDTLLPLWRQRFAVLSDKQIAGQNVIFDLSNITRIDSAGFALLC 71

Query: 60  YFM---EKYHGKIKLQGVSTHIEQLFSLISF 87
             +    K   + K   +     QL +L   
Sbjct: 72  ELIHHVRKVQERDKGLTIEHAPSQLLTLAEL 102


>gi|88861153|ref|ZP_01135787.1| putative anti-sigma B factor antagonist [Pseudoalteromonas
          tunicata D2]
 gi|88816875|gb|EAR26696.1| putative anti-sigma B factor antagonist [Pseudoalteromonas
          tunicata D2]
          Length = 97

 Score = 46.4 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 6/84 (7%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG-AELIMYF--MEKY 65
          F  +G      ++ I       +N   +    I DLSAI+ +DT G A LI     +++ 
Sbjct: 14 FVLSGELSHETVAAIEFSKKFKLNDVNR---IIFDLSAISRVDTAGLAWLIHTLSELQQQ 70

Query: 66 HGKIKLQGVSTHIEQLFSLISFTH 89
             + L+ V   +++L  L+  + 
Sbjct: 71 EIHLTLRNVPEQLQKLMQLVQVSQ 94


>gi|254672984|emb|CBA07467.1| conserved hypothetical protein [Neisseria meningitidis alpha275]
          Length = 100

 Score = 46.4 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              +G+     ++  A        +    D+  VDLS +   D+    L++  +    G
Sbjct: 17 TLHISGDVTVKTLTAAAFTRFRQQCRL--KDTRAVDLSGVGRADSACVSLLLEVLRGCKG 74

Query: 68 KIKLQGVSTHIEQLFSLIS 86
           ++L G+   +  L  L  
Sbjct: 75 SVRLTGIPESVRALSELYE 93


>gi|226329327|ref|ZP_03804845.1| hypothetical protein PROPEN_03232 [Proteus penneri ATCC 35198]
 gi|225202513|gb|EEG84867.1| hypothetical protein PROPEN_03232 [Proteus penneri ATCC 35198]
          Length = 69

 Score = 46.4 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 19/58 (32%), Gaps = 1/58 (1%)

Query: 288 KYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
            +  I    F++          ++    IK+   A  +  +A+  G     H   L +
Sbjct: 2   DWKGIDEGFFWASMQGAVEWRLDLVNCFIKSVVFAITVTWIALLTGMTQSQHQKGLAE 59


>gi|220933921|ref|YP_002512820.1| anti-sigma-factor antagonist [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995231|gb|ACL71833.1| anti-sigma-factor antagonist [Thioalkalivibrio sp. HL-EbGR7]
          Length = 111

 Score = 46.4 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 40/103 (38%), Gaps = 5/103 (4%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E+     R  G      ++ +          +     A VD+SA+  +D+ G  L++ ++
Sbjct: 8   ESEGDTLRLHGGLDLATVAGLWSSSQRLFEST--QPPARVDVSAVDRVDSAGVALLVQWV 65

Query: 63  EKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF 102
                +   ++++G+S  +  L +L        + + +  R  
Sbjct: 66  GMARARGVALRVEGMSPAMGDLIALADLEPLLPVVDDQTARQR 108


>gi|254362422|ref|ZP_04978531.1| hypothetical protein MHA_2029 [Mannheimia haemolytica PHL213]
 gi|261494091|ref|ZP_05990594.1| putative anti-sigma factor B antagonist [Mannheimia haemolytica
          serotype A2 str. BOVINE]
 gi|261496068|ref|ZP_05992478.1| putative anti-sigma factor B antagonist [Mannheimia haemolytica
          serotype A2 str. OVINE]
 gi|153094011|gb|EDN74927.1| hypothetical protein MHA_2029 [Mannheimia haemolytica PHL213]
 gi|261308318|gb|EEY09611.1| putative anti-sigma factor B antagonist [Mannheimia haemolytica
          serotype A2 str. OVINE]
 gi|261310257|gb|EEY11457.1| putative anti-sigma factor B antagonist [Mannheimia haemolytica
          serotype A2 str. BOVINE]
          Length = 107

 Score = 46.4 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 30/88 (34%), Gaps = 3/88 (3%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            N     + +G      +  +       ++ + +  S   DL  IT ID+ G  L+   
Sbjct: 12 QNNESLFVKLSGELTRNTLLPLWKQRASFLSPTGK-QSLYWDLKEITRIDSAGFTLLAEL 70

Query: 62 MEKYHGKI--KLQGVSTHIEQLFSLISF 87
          +  YH  I   L      +  L +L   
Sbjct: 71 LNHYHKIIPNSLINTPDSVRTLAALYDL 98


>gi|261393290|emb|CAX50918.1| conserved hypothetical protein [Neisseria meningitidis 8013]
          Length = 92

 Score = 46.0 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              +G+     ++  A        +    D+  VDLS +   D+    L++  +    G
Sbjct: 9  TLHISGDITVKTLTAAAFTRFRQQCRL--KDTRAVDLSGVGRADSACVSLLLEVLRGCKG 66

Query: 68 KIKLQGVSTHIEQLFSLIS 86
           ++L G+   +  L  L  
Sbjct: 67 SVRLTGIPESVRALSELYE 85


>gi|225873833|ref|YP_002755292.1| anti-anti-sigma factor [Acidobacterium capsulatum ATCC 51196]
 gi|225791854|gb|ACO31944.1| anti-anti-sigma factor [Acidobacterium capsulatum ATCC 51196]
          Length = 117

 Score = 46.0 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 45/102 (44%), Gaps = 5/102 (4%)

Query: 2   SENGITVFRFAGNWK-SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           + + + V    G+   SP + ++ + +   ++ +      + D++ +  +D+ G   ++ 
Sbjct: 10  ASDELLVITLTGSMTMSPALDQLMEQLYAQLD-TNPPRHIVFDMAGVDYLDSTGLGFLVR 68

Query: 61  F---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
               +EK  G I+L G S  ++ L ++       ++   + +
Sbjct: 69  INRDLEKRDGFIRLCGTSERVQALMAMTRTDTLLRVDCDRAE 110


>gi|161869248|ref|YP_001598415.1| hypothetical protein NMCC_0253 [Neisseria meningitidis 053442]
 gi|218767467|ref|YP_002341979.1| hypothetical protein NMA0489 [Neisseria meningitidis Z2491]
 gi|254804225|ref|YP_003082446.1| NTP binding protein [Neisseria meningitidis alpha14]
 gi|304388518|ref|ZP_07370621.1| conserved hypothetical protein [Neisseria meningitidis ATCC
          13091]
 gi|121051475|emb|CAM07768.1| hypothetical protein NMA0489 [Neisseria meningitidis Z2491]
 gi|161594801|gb|ABX72461.1| conserved hypothetical protein [Neisseria meningitidis 053442]
 gi|254667767|emb|CBA03701.1| NTP binding protein [Neisseria meningitidis alpha14]
 gi|304337515|gb|EFM03681.1| conserved hypothetical protein [Neisseria meningitidis ATCC
          13091]
          Length = 100

 Score = 46.0 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              +G+     ++  A        +    D+  VDLS +   D+    L++  +    G
Sbjct: 17 TLHISGDVTVKTLTAAAFTRFRQQCRL--KDTRAVDLSGVGRADSACVSLLLEVLRGCKG 74

Query: 68 KIKLQGVSTHIEQLFSLIS 86
           ++L G+   +  L  L  
Sbjct: 75 SVRLTGIPESVRALSELYE 93


>gi|325129423|gb|EGC52254.1| hypothetical protein NMBOX9930304_1776 [Neisseria meningitidis
          OX99.30304]
 gi|325135553|gb|EGC58171.1| hypothetical protein NMBM0579_1853 [Neisseria meningitidis M0579]
 gi|325201401|gb|ADY96855.1| conserved hypothetical protein [Neisseria meningitidis
          M01-240149]
 gi|325207382|gb|ADZ02834.1| conserved hypothetical protein [Neisseria meningitidis NZ-05/33]
          Length = 92

 Score = 46.0 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              +G+     ++  A        +    D+  VDLS +   D+    L++  +    G
Sbjct: 9  TLHISGDVTVKTLTAAAFTRFRQQCRL--KDTRAVDLSGVGRADSACVSLLLEVLRGCKG 66

Query: 68 KIKLQGVSTHIEQLFSLIS 86
           ++L G+   +  L  L  
Sbjct: 67 SVRLTGIPESVRALSELYE 85


>gi|284042296|ref|YP_003392636.1| anti-sigma-factor antagonist [Conexibacter woesei DSM 14684]
 gi|283946517|gb|ADB49261.1| anti-sigma-factor antagonist [Conexibacter woesei DSM 14684]
          Length = 132

 Score = 46.0 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 37/92 (40%), Gaps = 3/92 (3%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           +  +GI+V    G        E+ + +   ++    +D  +VDLS    +D  G + ++ 
Sbjct: 21  LDAHGISVIAVQGELDLFTAPELRERLREHMDDPEPADDLVVDLSGCAFVDASGCQALLR 80

Query: 61  FMEKY---HGKIKLQGVSTHIEQLFSLISFTH 89
              +      ++ +   +    ++F+++    
Sbjct: 81  AARQLTAVGRRLAIVNTNPGNTRIFTVMGLDE 112


>gi|315633779|ref|ZP_07889069.1| NTP binding protein, contains STAS domain protein
          [Aggregatibacter segnis ATCC 33393]
 gi|315477821|gb|EFU68563.1| NTP binding protein, contains STAS domain protein
          [Aggregatibacter segnis ATCC 33393]
          Length = 119

 Score = 46.0 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 24/61 (39%), Gaps = 1/61 (1%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVM-AINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          N     + +G      +  +        + K+    +   DLS +T ID+ G  L+  F+
Sbjct: 15 NDRITLQLSGELSRNTLLPLWQQRASFLLGKASAEQNIYWDLSQVTRIDSAGFALLCDFL 74

Query: 63 E 63
          +
Sbjct: 75 Q 75


>gi|160915292|ref|ZP_02077505.1| hypothetical protein EUBDOL_01301 [Eubacterium dolichum DSM 3991]
 gi|158433091|gb|EDP11380.1| hypothetical protein EUBDOL_01301 [Eubacterium dolichum DSM 3991]
          Length = 110

 Score = 45.6 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 4/85 (4%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
          ++GI  F F+G+     +S + +  +  I K  Q     +D  A++ +D+ G   ++   
Sbjct: 11 QDGILYFYFSGDLDHLHVSRMKEQCIQLIEK-YQPKQVKMDFQAVSFVDSTGIGFVLARY 69

Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSL 84
            + K+  K+ L  +S   E+LF +
Sbjct: 70 KQLSKFQAKLTLCNLSRANERLFQM 94


>gi|261378132|ref|ZP_05982705.1| conserved hypothetical protein [Neisseria cinerea ATCC 14685]
 gi|269145592|gb|EEZ72010.1| conserved hypothetical protein [Neisseria cinerea ATCC 14685]
          Length = 92

 Score = 45.6 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 30/80 (37%), Gaps = 4/80 (5%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFMEKYH 66
            R +G+     ++    +      +  + +  + VD S +   D+    L++  + +  
Sbjct: 9  TLRVSGDITVKTLT---GEAFERFQQQCRLNGIVAVDFSGVNRADSACVSLLLEILRRRK 65

Query: 67 GKIKLQGVSTHIEQLFSLIS 86
            IKL G+   +  L  L  
Sbjct: 66 DSIKLTGIPESVRALSELYE 85


>gi|311277836|ref|YP_003940067.1| hypothetical protein Entcl_0505 [Enterobacter cloacae SCF1]
 gi|308747031|gb|ADO46783.1| hypothetical protein Entcl_0505 [Enterobacter cloacae SCF1]
          Length = 96

 Score = 45.6 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 8/85 (9%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEKY 65
           R  G      I  + D    A         +I+DLS +T +DT G  L+++    +   
Sbjct: 14 LRLQGELDQDVIPPLWDARAEA-----TVGVSILDLSDVTRVDTAGVALLVHFVALIRAQ 68

Query: 66 HGKIKLQGVSTHIEQLFSLISFTHR 90
              ++ G S  ++ L  L + +  
Sbjct: 69 GKTPEIVGKSEKMQTLVQLYNLSDD 93


>gi|332163076|ref|YP_004299653.1| putative anti-sigma B factor antagonist [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|318604044|emb|CBY25542.1| uncharacterized protein YrbB [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325667306|gb|ADZ43950.1| putative anti-sigma B factor antagonist [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
          Length = 113

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 36/105 (34%), Gaps = 8/105 (7%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---K 64
                G      +  +       +     +D   +D+S +  +D+ G  L+++F E   K
Sbjct: 13  TLVLQGELDRETLLPLWQQREALL-----ADKTRIDVSQLRRVDSSGLALLVHFRELRNK 67

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
               + + GVS  +  L  L +      ++   P  +       N
Sbjct: 68  QGRSLAIIGVSDRLSTLIELYNLRDVIPVETIIPVEAVIPVEANN 112


>gi|325579006|ref|ZP_08148962.1| NTP binding protein, contains STAS domain protein [Haemophilus
           parainfluenzae ATCC 33392]
 gi|325159241|gb|EGC71375.1| NTP binding protein, contains STAS domain protein [Haemophilus
           parainfluenzae ATCC 33392]
          Length = 111

 Score = 45.2 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 36/86 (41%), Gaps = 5/86 (5%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFMEKY-- 65
            + +G      +  +       +++ + + S I  DL+ I  ID+ G  L+  F+     
Sbjct: 17  LQLSGELSRNTLLPLWQQRASFLSEKLANQSTIEFDLTNIKRIDSAGFALLCDFLHDSEQ 76

Query: 66  --HGKIKLQGVSTHIEQLFSLISFTH 89
             + K++L      +  L  L++ +H
Sbjct: 77  LPNKKVRLINPPEQLLTLADLVNLSH 102


>gi|307129074|ref|YP_003881090.1| hypothetical protein Dda3937_00693 [Dickeya dadantii 3937]
 gi|306526603|gb|ADM96533.1| predicted protein [Dickeya dadantii 3937]
          Length = 100

 Score = 45.2 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 40/98 (40%), Gaps = 10/98 (10%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           ++G    R  G+     +  +       +N     DS+++D+  +  +D+ G  L+++F
Sbjct: 9  QDDGA--LRLEGDLDRNTLLPLWQQREALLN-----DSSVLDVGQVARVDSSGLALLVHF 61

Query: 62 ---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96
              E+    + + G S  +  L  L + +    ++  
Sbjct: 62 YHQQEQRGKPLAIIGASDRLRTLIQLYNLSEIIPVRPA 99


>gi|123443931|ref|YP_001007902.1| putative anti-sigma B factor antagonist [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|122090892|emb|CAL13774.1| putative anti-sigma B factor antagonist [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 107

 Score = 45.2 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 35/94 (37%), Gaps = 8/94 (8%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---K 64
                G      +  +       +     +D   +D+S +  +D+ G  L+++F E   K
Sbjct: 13  TLVLQGELDRETLLPLWQQREALL-----ADKTRIDVSQLRRVDSSGLALLVHFRELRNK 67

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
             G + + GVS  +  L  L +      ++   P
Sbjct: 68  QGGSLVIIGVSDRLSTLIELYNLRDVIPVETVIP 101


>gi|330862749|emb|CBX72891.1| uncharacterized protein yrbB [Yersinia enterocolitica W22703]
          Length = 115

 Score = 44.8 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 36/105 (34%), Gaps = 8/105 (7%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---K 64
                G      +  +       +     +D   +D+S +  +D+ G  L+++F E   K
Sbjct: 15  TLVLQGELDRETLLPLWQQREALL-----ADKTRIDVSQLRRVDSSGLALLVHFRELRNK 69

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
               + + GVS  +  L  L +      ++   P  +       N
Sbjct: 70  QGRSLAIIGVSDRLSTLIELYNLRDVIPVETIIPVEAVIPVEANN 114


>gi|291450033|ref|ZP_06589423.1| predicted protein [Streptomyces albus J1074]
 gi|291352982|gb|EFE79884.1| predicted protein [Streptomyces albus J1074]
          Length = 185

 Score = 44.8 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 2/94 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           SE G  V +  G+     I+ +   +  A   +  S   +VDLS +   D+    + +  
Sbjct: 77  SEGGGIVVQLGGDLDLENITPLGPALSDA--AATVSGPVVVDLSGVGFADSSTVNVFLQA 134

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKN 95
                 +++   +S  +E+LF LI       +  
Sbjct: 135 YGAIGPRLRFAALSPFVERLFGLIGLQSALPVHE 168


>gi|15677792|ref|NP_274956.1| hypothetical protein NMB1962 [Neisseria meningitidis MC58]
 gi|7227222|gb|AAF42291.1| hypothetical protein NMB1962 [Neisseria meningitidis MC58]
 gi|254670839|emb|CBA07268.1| STAS domain protein [Neisseria meningitidis alpha153]
 gi|308390060|gb|ADO32380.1| hypothetical protein NMBB_2245 [Neisseria meningitidis alpha710]
 gi|316985590|gb|EFV64537.1| hypothetical protein NMH_0136 [Neisseria meningitidis H44/76]
 gi|325127425|gb|EGC50356.1| hypothetical protein NMXN1568_1823 [Neisseria meningitidis N1568]
 gi|325139612|gb|EGC62152.1| hypothetical protein NMBCU385_2035 [Neisseria meningitidis CU385]
 gi|325201010|gb|ADY96465.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
          Length = 92

 Score = 44.8 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
          +    G+     ++  A        +    D+  VDLS +   D+    L++  +    G
Sbjct: 9  ILHIGGDITVKTLTAAAFTRFRQQCRL--KDTCAVDLSGVGRADSACVSLLLEVLRGCKG 66

Query: 68 KIKLQGVSTHIEQLFSLIS 86
           ++L G+   +  L  L  
Sbjct: 67 SVRLTGIPESVRALSELYE 85


>gi|116747919|ref|YP_844606.1| anti-sigma-factor antagonist [Syntrophobacter fumaroxidans MPOB]
 gi|116696983|gb|ABK16171.1| anti-sigma-factor antagonist [Syntrophobacter fumaroxidans MPOB]
          Length = 120

 Score = 44.8 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 36/110 (32%), Gaps = 4/110 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---M 59
           E    V    G      +  I   V++ + K+       +DL+ +  +DT G  ++   +
Sbjct: 8   EEHRPVVELGGVLDRESVPGI-RKVLLRLVKAKGIKDLRIDLAEVERMDTSGVAMLVEVL 66

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
             +    GK+ L   S    ++  L       +     P  +      + 
Sbjct: 67  RVLSARKGKVHLTNPSEPATRMIRLARLNGVFEQGASGPLAASGAGPQRR 116


>gi|227358276|ref|ZP_03842617.1| anti-sigma factor antagonist [Proteus mirabilis ATCC 29906]
 gi|227161612|gb|EEI46649.1| anti-sigma factor antagonist [Proteus mirabilis ATCC 29906]
          Length = 102

 Score = 44.5 bits (104), Expect = 0.024,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 8/85 (9%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
          +  F G      +  +         K++ +D  I+D+S +  ID+ G  L ++    ME 
Sbjct: 18 ILSFQGTLDRETLLPVWQQ-----RKALLADINIIDISQLDHIDSTGLALFVHLKAEMEA 72

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89
             +  +QGVS   + L +L     
Sbjct: 73 LERQCVIQGVSERFQTLITLYDLDE 97


>gi|268612024|ref|ZP_06145751.1| anti-sigma-factor antagonist domain-containing protein
          [Ruminococcus flavefaciens FD-1]
          Length = 101

 Score = 44.5 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 4/86 (4%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59
          +ENG +V   +G       +++   +   I  S +    ++DL  IT +D+ G  LIM  
Sbjct: 7  NENGTSVAYISGEIDHHNAADLRSQLDRYIISS-RPSQLVIDLEGITFMDSSGIGLIMGR 65

Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSL 84
             M+   G++ +     +I ++  L
Sbjct: 66 SKLMKTCGGRLSVHSPQPYIRRVLKL 91


>gi|301155767|emb|CBW15235.1| predicted protein [Haemophilus parainfluenzae T3T1]
          Length = 111

 Score = 44.5 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 5/86 (5%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFMEKY-- 65
            + +G      +  +       +++   + S I  DL+ I  ID+ G  L+  F+     
Sbjct: 17  LQLSGELSRNTLLPLWQQRASFLSEKQNNQSLIEFDLTEINRIDSAGFALLCDFLHDCEQ 76

Query: 66  --HGKIKLQGVSTHIEQLFSLISFTH 89
             + K++L      +  L  L++ +H
Sbjct: 77  LPNKKVRLINPPEQLLTLADLVNLSH 102


>gi|255604967|ref|XP_002538316.1| conserved hypothetical protein [Ricinus communis]
 gi|223512772|gb|EEF24067.1| conserved hypothetical protein [Ricinus communis]
          Length = 187

 Score = 44.5 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 40/95 (42%), Gaps = 6/95 (6%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59
           S+         G       +E+   ++ A+      D+  +DLS +TE D  G +L++  
Sbjct: 91  SQGAAACLAVEGEMTIYRAAELHPVLLDAVR---THDAPALDLSDVTEFDCAGMQLLLVA 147

Query: 60  -YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
               ++   ++ L+G S  +   F+++  T   + 
Sbjct: 148 RREAQRLGKQLVLRGASPAVRDAFAMLGMTDDGEP 182


>gi|126175853|ref|YP_001052002.1| SpoIIAA family protein [Shewanella baltica OS155]
 gi|152999235|ref|YP_001364916.1| SpoIIAA family protein [Shewanella baltica OS185]
 gi|160873848|ref|YP_001553164.1| SpoIIAA family protein [Shewanella baltica OS195]
 gi|217971908|ref|YP_002356659.1| SpoIIAA family protein [Shewanella baltica OS223]
 gi|125999058|gb|ABN63133.1| SpoIIAA family protein [Shewanella baltica OS155]
 gi|151363853|gb|ABS06853.1| SpoIIAA family protein [Shewanella baltica OS185]
 gi|160859370|gb|ABX47904.1| SpoIIAA family protein [Shewanella baltica OS195]
 gi|217497043|gb|ACK45236.1| SpoIIAA family protein [Shewanella baltica OS223]
 gi|315266075|gb|ADT92928.1| SpoIIAA family protein [Shewanella baltica OS678]
          Length = 94

 Score = 44.5 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 33/85 (38%), Gaps = 4/85 (4%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
             TV    G     ++  +       + +S Q    I+ LS +   D+ G   ++  + 
Sbjct: 6  QQGTVCHLKGRITQADVITLWPQRQQLLGESTQ----ILSLSGLEYSDSAGMAFLLALVR 61

Query: 64 KYHGKIKLQGVSTHIEQLFSLISFT 88
          ++  +++L   S  +++L  L    
Sbjct: 62 EHGSQLELSSASPQLKKLIDLYDLH 86


>gi|54307968|ref|YP_128988.1| hypothetical protein PBPRA0773 [Photobacterium profundum SS9]
 gi|46912394|emb|CAG19186.1| Hypothetical protein PBPRA0773 [Photobacterium profundum SS9]
          Length = 103

 Score = 44.1 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 40/90 (44%), Gaps = 6/90 (6%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFMEKY 65
               G      ++E+   ++  ++   ++ S + DL+ ++E+DT G +L+        K 
Sbjct: 16  LSLTGEMSIYSVTELKPRLLAYLH---ENQSVLFDLTEVSEMDTAGIQLLWLCHQEAAKV 72

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKN 95
              + + G+S+   +  +L+    +  ++ 
Sbjct: 73  GKALAISGISSAALEAITLLRLERQFNLQP 102


>gi|291439807|ref|ZP_06579197.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
 gi|291342702|gb|EFE69658.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
          Length = 295

 Score = 44.1 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 12/114 (10%), Positives = 33/114 (28%), Gaps = 6/114 (5%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E    +    G         +A+ +      + + D   +D+S +  +DT G E +    
Sbjct: 93  EADRALLVPRGELVRGCAHALAEKLARLPADTARVD---LDMSGVHFMDTAGLEFLDVLR 149

Query: 63  ---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYH 113
               +    +     +    ++  L        ++   P+ +    +       
Sbjct: 150 DHGRRRSVPVTATRWNGQPRRILELAGLDTADPLRRPAPEGASARAASAVSLER 203


>gi|319409729|emb|CBY90035.1| conserved hypothetical protein [Neisseria meningitidis WUE 2594]
          Length = 92

 Score = 44.1 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
          +    G+     ++  A        +    D+  VDLS +   D+    L++  +    G
Sbjct: 9  ILHIGGDITVKTLTAAAFTRFRQQCRL--KDTRAVDLSGVGRADSACVSLLLEVLRGCKG 66

Query: 68 KIKLQGVSTHIEQLFSLIS 86
           ++L G+   +  L  L  
Sbjct: 67 SVRLTGIPESVRALSELYE 85


>gi|269124391|ref|YP_003297761.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183]
 gi|268309349|gb|ACY95723.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183]
          Length = 110

 Score = 44.1 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 38/102 (37%), Gaps = 5/102 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S+    V    G         +   +   I    ++D  +VDLS +   D+ G  +++  
Sbjct: 9   SQGDYAVVTATGELDLYTAPRLQTALASLIRD--RADRVVVDLSGVEFCDSTGVNVLLAA 66

Query: 62  MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100
           M++     G ++L G+   + ++  +        I    P R
Sbjct: 67  MKRLQEQGGTLELAGLRPPVRRILQVTGLDSVFTIAEAVPTR 108


>gi|302542614|ref|ZP_07294956.1| putative STAS domain protein [Streptomyces hygroscopicus ATCC
           53653]
 gi|302460232|gb|EFL23325.1| putative STAS domain protein [Streptomyces himastatinicus ATCC
           53653]
          Length = 116

 Score = 44.1 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 33/93 (35%), Gaps = 5/93 (5%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            G+TV   AG         I+  +             ++DL  +T +D  G  L+     
Sbjct: 16  GGVTVAEIAGELDIFAAGRISARLDSL--ARTGCPDLVLDLRQVTFLDCAGVSLLCRLRN 73

Query: 64  K---YHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
           +     G+++L  V     +L  ++      ++
Sbjct: 74  RVLEREGRLRLVIVDPRFLRLLRMVRLEDAFEV 106


>gi|170728554|ref|YP_001762580.1| anti-sigma-factor antagonist [Shewanella woodyi ATCC 51908]
 gi|169813901|gb|ACA88485.1| anti-sigma-factor antagonist [Shewanella woodyi ATCC 51908]
          Length = 100

 Score = 44.1 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 4/84 (4%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
             ++   +G     EI  +       +N+ ++    ++DLS ++  D+ G   I+  M 
Sbjct: 6  QQGSICHISGRLSQEEIPALWLRRKSLLNREVE----VIDLSELSYSDSAGIAFILELMS 61

Query: 64 KYHGKIKLQGVSTHIEQLFSLISF 87
              + +    ++  EQL  LI  
Sbjct: 62 VARAEKRSLSFTSASEQLSKLIDL 85


>gi|89899708|ref|YP_522179.1| anti-sigma-factor antagonist domain-containing protein
          [Rhodoferax ferrireducens T118]
 gi|89344445|gb|ABD68648.1| anti-sigma-factor antagonist (STAS) domain protein [Rhodoferax
          ferrireducens T118]
          Length = 121

 Score = 44.1 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 9/88 (10%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60
          N  +V R  G       +E+   ++       +  +  +DLS +TE+DT G +L+M    
Sbjct: 9  NEPSVLRIEGELTIFRAAELKPLLLA------EPMAQAIDLSGVTELDTAGVQLLMLAKK 62

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFT 88
                 K+ L   S  + ++F L++  
Sbjct: 63 MALATQRKLSLVAHSPAVIEVFELLNLA 90


>gi|239926897|ref|ZP_04683850.1| putative anti-sigma factor antagonist [Streptomyces ghanaensis ATCC
           14672]
 gi|291435243|ref|ZP_06574633.1| anti-sigma factor antagonist [Streptomyces ghanaensis ATCC 14672]
 gi|291338138|gb|EFE65094.1| anti-sigma factor antagonist [Streptomyces ghanaensis ATCC 14672]
          Length = 119

 Score = 44.1 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 6/89 (6%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G  V   +G         + + V  A          ++DLS +T  D+ G  +++    
Sbjct: 17  SGPYVLEVSGELDHHTAHSLTEAVDEA---PFDDHGVVLDLSGLTYCDSTGITVLITAYR 73

Query: 64  K---YHGKIKLQGVSTHIEQLFSLISFTH 89
           +       + L GVS    ++F ++    
Sbjct: 74  RSQATGSPLSLAGVSPDQMRVFQVVGLDQ 102


>gi|304411201|ref|ZP_07392816.1| SpoIIAA family protein [Shewanella baltica OS183]
 gi|307306496|ref|ZP_07586239.1| SpoIIAA family protein [Shewanella baltica BA175]
 gi|304350394|gb|EFM14797.1| SpoIIAA family protein [Shewanella baltica OS183]
 gi|306910787|gb|EFN41215.1| SpoIIAA family protein [Shewanella baltica BA175]
          Length = 94

 Score = 44.1 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 33/85 (38%), Gaps = 4/85 (4%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
             TV    G     ++  +       + +S Q    I+ LS +   D+ G   ++  + 
Sbjct: 6  QQGTVCHLKGRITQADVITLWPRRQQLLGESTQ----ILSLSGLEYSDSAGMAFLLALVR 61

Query: 64 KYHGKIKLQGVSTHIEQLFSLISFT 88
          ++  +++L   S  +++L  L    
Sbjct: 62 EHGSQLELSSASPQLKKLIDLYDLH 86


>gi|4580940|gb|AAD24545.1| YrbE1B [Mycobacterium leprae]
          Length = 106

 Score = 44.1 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 45/110 (40%), Gaps = 11/110 (10%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
             + I+D    +      +   G    +  +++   L LI Q+  +G   + VV   + +
Sbjct: 1   AARGIDDIGQMSWFG---LIALGNIPNALSRYRKETLRLIAQIG-MGTGAMAVVGGTAAI 56

Query: 178 TGAV-------IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
            G V       +A QG   L   G E F+    +++ +R    ++T +++
Sbjct: 57  VGFVTLSGSSLVAIQGFASLGAIGVEAFTGFFAALINVRIAAPVITGIVM 106


>gi|332038538|gb|EGI74981.1| putative anti-sigma B factor antagonist [Pseudoalteromonas
          haloplanktis ANT/505]
          Length = 97

 Score = 43.7 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 6/76 (7%)

Query: 12 AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG-AELIMYF--MEKYHGK 68
          +G      I    D+ ++      +      DLS ++ +DT G A LI  F  +++   +
Sbjct: 17 SGELTRNSIG---DEQLLNNKLLTKHKIIYFDLSGVSRVDTAGLAWLIHSFAELKQQGIR 73

Query: 69 IKLQGVSTHIEQLFSL 84
          ++LQ +   ++ L  L
Sbjct: 74 LELQNLPEQLQNLMQL 89


>gi|197287462|ref|YP_002153334.1| anti-sigma factor antagonist [Proteus mirabilis HI4320]
 gi|194684949|emb|CAR47142.1| putative anti-sigma factor antagonist [Proteus mirabilis HI4320]
          Length = 97

 Score = 43.7 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 8/85 (9%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
          +  F G      +  +         K++ +D  I+D+S +  ID+ G  L ++    ME 
Sbjct: 13 ILSFQGTLDRETLLPVWQQ-----RKALLADINIIDISQLDHIDSTGLALFVHLKAEMEA 67

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89
             +  +QGVS   + L +L     
Sbjct: 68 LERQCVIQGVSERFQTLITLYDLDE 92


>gi|302867297|ref|YP_003835934.1| sulfate transporter/antisigma-factor antagonist STAS
           [Micromonospora aurantiaca ATCC 27029]
 gi|302570156|gb|ADL46358.1| Sulfate transporter/antisigma-factor antagonist STAS
           [Micromonospora aurantiaca ATCC 27029]
          Length = 123

 Score = 43.7 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 29/95 (30%), Gaps = 2/95 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           + G    R AG        E+ D V     +        +D + +   D+ G   ++   
Sbjct: 22  DAGSARVRLAGELDFDTAPELVDAVADL--RRDGHQELELDFAGVDLCDSSGLSALVVIH 79

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97
               G I+L  ++  I  L              Q+
Sbjct: 80  RAGTGAIRLLNLNPQIRHLLDRTGLAELLAAPPQE 114


>gi|297157353|gb|ADI07065.1| putative anti-anti-sigma-factor [Streptomyces bingchenggensis
           BCW-1]
          Length = 130

 Score = 43.7 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 36/93 (38%), Gaps = 5/93 (5%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            G+TV    G       + I+  +     ++    + ++DL  +T +D  G  L+     
Sbjct: 16  GGVTVAEITGELDIFAAARISPRLDSLAREA--RPNLVLDLRMVTFLDCAGVSLLCRLRN 73

Query: 64  KY---HGKIKLQGVSTHIEQLFSLISFTHRKKI 93
           +     G+++L  V     +L  ++      ++
Sbjct: 74  RALERGGRLRLVIVDPRFTRLLRMVRLEDAFEV 106


>gi|227326641|ref|ZP_03830665.1| hypothetical protein PcarcW_04679 [Pectobacterium carotovorum
          subsp. carotovorum WPP14]
          Length = 100

 Score = 43.7 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 35/85 (41%), Gaps = 7/85 (8%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK-- 64
          +     G+     +            +S+ +    +D+S +  +D+ G  L+M+  ++  
Sbjct: 16 STLALTGDLDRETLLPFWQQ-----RESLLAGKTTLDVSGLNRVDSAGLALLMHVYQQPS 70

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89
            G+I + G S  ++ L +L +   
Sbjct: 71 SGGEITIVGASDRLKTLIALYNLNE 95


>gi|297196319|ref|ZP_06913717.1| anti-sigma factor antagonist [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197722897|gb|EDY66805.1| anti-sigma factor antagonist [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 132

 Score = 43.7 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 9/86 (10%), Positives = 35/86 (40%), Gaps = 5/86 (5%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY- 60
                 V   +G       + + + +   ++    +   +VD + +   D+ G  ++++ 
Sbjct: 26  QRGDTVVLSLSGELDHDTAAPLREAIEEHLHA--GAKRLVVDCAGLDFCDSTGLNVLLHG 83

Query: 61  --FMEKYHGKIKLQGVSTHIEQLFSL 84
               ++   +++L G+   + ++F +
Sbjct: 84  RLAAQETDARVELAGLRPPVARMFEI 109


>gi|227112744|ref|ZP_03826400.1| hypothetical protein PcarbP_07269 [Pectobacterium carotovorum
          subsp. brasiliensis PBR1692]
          Length = 96

 Score = 43.7 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          +   +     G+     +            +S+ +    +D+S +  +D+ G  L+M+  
Sbjct: 8  QAQESTLALTGDLDRETLLPFWQQ-----RESLLAGKTTLDVSGLNRVDSAGLALLMHVY 62

Query: 63 EK--YHGKIKLQGVSTHIEQLFSLISFTH 89
          ++    G+I + G S  ++ L +L +   
Sbjct: 63 QQPSSGGEITIVGASDRLKTLIALYNLNE 91


>gi|294634667|ref|ZP_06713200.1| putative STAS domain protein [Edwardsiella tarda ATCC 23685]
 gi|291091913|gb|EFE24474.1| putative STAS domain protein [Edwardsiella tarda ATCC 23685]
          Length = 100

 Score = 43.7 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 6/85 (7%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
           T+ R  G      + E       A+ + I      +D+S +T +D+ G  L+++     
Sbjct: 12 GTILRLHGELVCDALGEFWRQ-RQALFQGIN----CLDISGVTRVDSAGLALLLHVQNLC 66

Query: 66 HG-KIKLQGVSTHIEQLFSLISFTH 89
           G  + L+GVS  +  L +L +   
Sbjct: 67 PGTPLPLRGVSDRLHTLIALYNLHE 91


>gi|289207567|ref|YP_003459633.1| anti-sigma-factor antagonist [Thioalkalivibrio sp. K90mix]
 gi|288943198|gb|ADC70897.1| anti-sigma-factor antagonist [Thioalkalivibrio sp. K90mix]
          Length = 108

 Score = 43.3 bits (101), Expect = 0.053,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 2/79 (2%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
             +G      +  +   +   +          VDL  +T ID+ G  L++    + H +
Sbjct: 13 LALSGTLTFATVPGLESRIRALLAGL--PARTRVDLGEVTRIDSAGVALLVTLWRRVHEQ 70

Query: 69 IKLQGVSTHIEQLFSLISF 87
              G  +  + L  L+  
Sbjct: 71 GGELGFHSIPQGLVPLVEL 89


>gi|271968053|ref|YP_003342249.1| anti-sigma-factor antagonist [Streptosporangium roseum DSM 43021]
 gi|270511228|gb|ACZ89506.1| anti-sigma-factor antagonist [Streptosporangium roseum DSM 43021]
          Length = 123

 Score = 43.3 bits (101), Expect = 0.054,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 41/104 (39%), Gaps = 5/104 (4%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA---ELIMYFM 62
           + V   +G+       ++  D+  A+  +      ++DL+ +   D+ G      I   +
Sbjct: 20  VPVIALSGDLDFTNAEQLRADIQAAL--TPDHRDLVLDLTGLDFCDSTGIRIFLAIRKLL 77

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106
           ++  G + L G+++ + ++F L    H   ++           S
Sbjct: 78  QERGGAVALTGLNSRLTRIFRLTGLVHAFTVQPTAADAVTLLRS 121


>gi|119896700|ref|YP_931913.1| STAS domain-containing protein [Azoarcus sp. BH72]
 gi|119669113|emb|CAL93026.1| putative STAS domain protein [Azoarcus sp. BH72]
          Length = 102

 Score = 43.3 bits (101), Expect = 0.055,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 33/85 (38%), Gaps = 3/85 (3%)

Query: 19  EISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFMEKYHGKIKLQGVS 75
            I   A+     +    Q+D   +DLSA+ EIDT G +L++      ++   + ++   S
Sbjct: 16  TIYHAAEQKQQLVAALAQADELQIDLSAVAEIDTAGFQLLILVKREAQRLGKRARIVAHS 75

Query: 76  THIEQLFSLISFTHRKKIKNQKPQR 100
             + ++    +           P  
Sbjct: 76  AAVREVVDFFNMAAEFGDPMLMPAP 100


>gi|50119259|ref|YP_048426.1| hypothetical protein ECA0299 [Pectobacterium atrosepticum
          SCRI1043]
 gi|49609785|emb|CAG73219.1| conserved hypothetical protein [Pectobacterium atrosepticum
          SCRI1043]
          Length = 96

 Score = 43.3 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 35/85 (41%), Gaps = 7/85 (8%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK-- 64
          +     G+     +            +S+ +    +D+S +  +D+ G  L+M+  ++  
Sbjct: 12 STLALTGDLDRETLLPFWQQ-----RESLLAGKTTLDVSGLNRVDSAGLALLMHVYQQPS 66

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89
            G+I + G S  ++ L +L +   
Sbjct: 67 SGGEIAIVGASDRLKTLIALYNLNE 91


>gi|127511049|ref|YP_001092246.1| hypothetical protein Shew_0115 [Shewanella loihica PV-4]
 gi|126636344|gb|ABO21987.1| hypothetical protein Shew_0115 [Shewanella loihica PV-4]
          Length = 99

 Score = 43.3 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 6/80 (7%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEKY 65
           R A       I ++  D+   +  S   D+  +D S +T +DT GA+L+ +     + +
Sbjct: 6  IRLASELTIRNIQQVHHDIAEQLTAS---DTLCIDASQLTRVDTSGAQLLYFLHHYCQTH 62

Query: 66 HGKIKLQGVSTHIEQLFSLI 85
          H  I+    +  +E   + +
Sbjct: 63 HHAIEWTPPAEEVEHTLAEL 82


>gi|118581090|ref|YP_902340.1| hypothetical protein Ppro_2679 [Pelobacter propionicus DSM 2379]
 gi|118503800|gb|ABL00283.1| hypothetical protein Ppro_2679 [Pelobacter propionicus DSM 2379]
          Length = 130

 Score = 43.3 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 45/120 (37%), Gaps = 4/120 (3%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDV-VMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
           +S +G T     G+W    +    + +  +    S  ++   +D + I  ID  G +++ 
Sbjct: 2   VSYDGRTRVTLWGHWDLSSVIRQIELLSALRQLGSGGAERYSIDCAGIGSIDREGLQVLH 61

Query: 60  YFME--KYHG-KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116
            +M+  + HG K +L  +   + +    +           +P R    +        +G+
Sbjct: 62  VWMQCARLHGLKPELSNLPAGMLETIQRLGLERCFADFYAEPAREMPKDEILAYFSPLGE 121


>gi|240948312|ref|ZP_04752698.1| hypothetical protein AM305_05649 [Actinobacillus minor NM305]
 gi|240297351|gb|EER47892.1| hypothetical protein AM305_05649 [Actinobacillus minor NM305]
          Length = 109

 Score = 43.3 bits (101), Expect = 0.059,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +  N   V   +G      +  +       ++ + ++     DL AI+ ID+ G  L+  
Sbjct: 12 LHNNESLVVELSGELTRDTLLPLWKQRASFLS-TRKNQHIYWDLKAISRIDSAGFVLLTE 70

Query: 61 FME 63
           + 
Sbjct: 71 LLH 73


>gi|223041899|ref|ZP_03612085.1| hypothetical protein AM202_0495 [Actinobacillus minor 202]
 gi|223017315|gb|EEF15740.1| hypothetical protein AM202_0495 [Actinobacillus minor 202]
          Length = 109

 Score = 43.3 bits (101), Expect = 0.059,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +  N   V   +G      +  +       ++ + ++     DL AI+ ID+ G  L+  
Sbjct: 12 LHNNESLVVELSGELTRDTLLPLWKQRASFLS-TRKNQHIYWDLKAISRIDSAGFVLLTE 70

Query: 61 FME 63
           + 
Sbjct: 71 LLH 73


>gi|307330897|ref|ZP_07610030.1| anti-sigma-factor antagonist [Streptomyces violaceusniger Tu 4113]
 gi|306883438|gb|EFN14491.1| anti-sigma-factor antagonist [Streptomyces violaceusniger Tu 4113]
          Length = 150

 Score = 43.3 bits (101), Expect = 0.059,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 33/93 (35%), Gaps = 5/93 (5%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            G+TV   AG         I   +   I    +    ++DL  +T +D  G  L+     
Sbjct: 36  GGVTVAEIAGELDIFAAGRIVARLDSLI--QARCPDLVLDLRPVTFLDCAGLSLLCRLRN 93

Query: 64  K---YHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
           +     G+++L        +L  ++      ++
Sbjct: 94  RVLERDGRLRLVIDEPRFVRLLRMVRLDDAFEV 126


>gi|326775062|ref|ZP_08234327.1| anti-anti-sigma factor [Streptomyces cf. griseus XylebKG-1]
 gi|326655395|gb|EGE40241.1| anti-anti-sigma factor [Streptomyces cf. griseus XylebKG-1]
          Length = 120

 Score = 43.3 bits (101), Expect = 0.060,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 38/92 (41%), Gaps = 2/92 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            E G  V   +G+     ++ +  D+ +A      S   +VDLS +   D+    +++  
Sbjct: 17  QERGALVLTVSGDLDIDSVAPL--DLALASAADDGSGPVVVDLSGVGFADSTTVNVLLQG 74

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
                G+++L   S  +++L  +I       +
Sbjct: 75  NTALGGRLRLAAPSPFMQRLIGMIGLDSALPV 106


>gi|254381137|ref|ZP_04996502.1| hypothetical protein SSAG_00804 [Streptomyces sp. Mg1]
 gi|194340047|gb|EDX21013.1| hypothetical protein SSAG_00804 [Streptomyces sp. Mg1]
          Length = 109

 Score = 43.3 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 34/86 (39%), Gaps = 6/86 (6%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          S+ G T     G       + +       I   +   +  +DL+ +T ID+ G  +++  
Sbjct: 12 SQPGHTTITLTGELDLDT-NPLVTQATDPIA--LARHTLTLDLTGVTFIDSTGLTMLLRL 68

Query: 62 MEKYH---GKIKLQGVSTHIEQLFSL 84
           ++ +   G ++L G       LF L
Sbjct: 69 RQRVNTEAGHLELHGARDQALNLFEL 94


>gi|182434535|ref|YP_001822254.1| putative anti-sigma factor antagonist [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|178463051|dbj|BAG17571.1| putative anti-sigma factor antagonist [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 123

 Score = 43.3 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 37/92 (40%), Gaps = 2/92 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            E G  V   +G+     ++ +  D+ +A      S   +VDLS +   D+    +++  
Sbjct: 20  QERGALVLTVSGDLDIDSVAPL--DLALASAADDGSGPVVVDLSGVGFADSTTVNVLLQG 77

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
                G+++L   S  + +L  +I       +
Sbjct: 78  NTALGGRLRLAAPSPFMRRLIGMIGLDSALPV 109


>gi|228962766|ref|ZP_04124032.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar
          pakistani str. T13001]
 gi|228796919|gb|EEM44263.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar
          pakistani str. T13001]
          Length = 106

 Score = 43.3 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 5/86 (5%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
             F   G   +   + +    +  I +   S   ++D+S +T +D+ G  + M  ++K 
Sbjct: 13 TYTFVLTGELDA-HYAPVLKKQLDTILEQGHSH-IVLDVSRVTYMDSTGLGVCMGLLKKV 70

Query: 66 H---GKIKLQGVSTHIEQLFSLISFT 88
          H   G +++ GVS+ I++LF L  FT
Sbjct: 71 HKQDGFLEVTGVSSRIQRLFDLTGFT 96


>gi|269126279|ref|YP_003299649.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183]
 gi|268311237|gb|ACY97611.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183]
          Length = 126

 Score = 43.3 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 36/108 (33%), Gaps = 5/108 (4%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           +  +G       G         +      A++++       VDL  +T  D  G  +++ 
Sbjct: 21  VGADGRVTIAIRGEMDLASAGSLYRRARAALSEA--DGDVRVDLGGVTFCDAQGLSVLVR 78

Query: 61  F---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105
                ++  G++ L+ V  ++ +L  +     R  +    P       
Sbjct: 79  IANDAQRQGGRVLLERVPPNVARLLRITGLDRRFPMSAGAPSIPEPLG 126


>gi|285017152|ref|YP_003374863.1| anti-sigma factor antagonist transcription regulator protein
          [Xanthomonas albilineans GPE PC73]
 gi|283472370|emb|CBA14875.1| hypothetical anti-sigma factor antagonist transcription regulator
          protein [Xanthomonas albilineans]
          Length = 127

 Score = 42.9 bits (100), Expect = 0.073,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 34/91 (37%), Gaps = 5/91 (5%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--- 58
          +++       +G   +     + + +   +   I   + ++DLS +  I + G   I   
Sbjct: 11 AQDKRQRITLSGRLDTHTYQTLDEALAPLLATPIT--TLVLDLSQLDYISSAGIRSIFKA 68

Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
             +    G++ +   +  I ++F L+    
Sbjct: 69 RKLLAARDGQVLVVNPAPQIRKVFDLVKAVP 99


>gi|148976137|ref|ZP_01812880.1| anti-anti-sigma regulatory factor [Vibrionales bacterium SWAT-3]
 gi|145964532|gb|EDK29786.1| anti-anti-sigma regulatory factor [Vibrionales bacterium SWAT-3]
          Length = 109

 Score = 42.9 bits (100), Expect = 0.077,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 40/101 (39%), Gaps = 6/101 (5%)

Query: 6   ITVFRFA--GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            T    +  G+  +   S  A   +  +  +       VD S +  +D+ G   I+Y  +
Sbjct: 10  TTTLTLSIFGDLDAAG-SRDAQTDIDDVISNDGHQEIEVDFSQVEFLDSSGVGAIVYMFK 68

Query: 64  KY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
           +       ++L+ VS    ++ +L+   H   + ++ P  S
Sbjct: 69  RLTERERDMRLENVSGQPLEIMNLLRIGHAIPVNSKNPTNS 109


>gi|258654237|ref|YP_003203393.1| anti-sigma-factor antagonist [Nakamurella multipartita DSM 44233]
 gi|258557462|gb|ACV80404.1| anti-sigma-factor antagonist [Nakamurella multipartita DSM 44233]
          Length = 136

 Score = 42.9 bits (100), Expect = 0.080,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 39/107 (36%), Gaps = 4/107 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDS-AIVDLSAITEIDTIGAELIMYFM 62
              T+ R  G   + E   +A ++        +      +DLS ++ +D  G E+++   
Sbjct: 30  GAGTLVRIVGRLDAREAPRVARELAAVNRLPRRGPPRLTLDLSGVSYLDDTGLEVLLQLQ 89

Query: 63  EKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106
           ++     G+++LQ  +  + +L           ++    +       
Sbjct: 90  DRLAAQGGELELQSPTAAVVRLLHEAHLHGAAGLRAPARELRPPTGP 136


>gi|256379100|ref|YP_003102760.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827]
 gi|255923403|gb|ACU38914.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827]
          Length = 108

 Score = 42.9 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 9/90 (10%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY-- 65
          V    G   +  +  ++D +     + I     +VDL+ +T +DT G  L++ +  +   
Sbjct: 15 VVVVTGELDADTVPVLSDHLEETPARRI-----VVDLAGVTFMDTTGLSLVLDWHRRLVD 69

Query: 66 --HGKIKLQGVSTHIEQLFSLISFTHRKKI 93
             G  +L  +   + +LF L       +I
Sbjct: 70 TGAGDFRLASLQPSVHKLFRLTELVDVMRI 99


>gi|239908932|ref|YP_002955674.1| anti-sigma factor antagonist family protein [Desulfovibrio
           magneticus RS-1]
 gi|239798799|dbj|BAH77788.1| anti-sigma factor antagonist family protein [Desulfovibrio
           magneticus RS-1]
          Length = 259

 Score = 42.9 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF-- 61
           +G TV   AG+  +     + + V   +          +DLS +  ID++G  L++    
Sbjct: 166 DGRTVLTPAGDIVASAADGLRNAVKDLLPGL--DGPFAMDLSKVELIDSVGIGLLIAVHN 223

Query: 62  -MEKYHGKIKLQGVSTHIEQLFSLISF 87
            + K  G++ L  VS  +  L   +  
Sbjct: 224 SLSKKGGRLALDHVSPDLAALLRTMRL 250


>gi|152972115|ref|YP_001337261.1| hypothetical protein KPN_03601 [Klebsiella pneumoniae subsp.
          pneumoniae MGH 78578]
 gi|262042750|ref|ZP_06015904.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
          rhinoscleromatis ATCC 13884]
 gi|150956964|gb|ABR78994.1| hypothetical protein KPN_03601 [Klebsiella pneumoniae subsp.
          pneumoniae MGH 78578]
 gi|259039975|gb|EEW41092.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
          rhinoscleromatis ATCC 13884]
          Length = 96

 Score = 42.9 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 8/80 (10%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EK 64
               G      +  + +    A      + +AI+DLS  T +DT G  L+++FM    +
Sbjct: 13 TLALHGELDQDLLVPLWEARAQA-----TAGTAIIDLSQTTRVDTAGLALLVHFMALIRR 67

Query: 65 YHGKIKLQGVSTHIEQLFSL 84
             + +L G S +++ L  L
Sbjct: 68 QGREAQLVGKSENLQTLIGL 87


>gi|22124062|ref|NP_667485.1| hypothetical protein y0142 [Yersinia pestis KIM 10]
 gi|45443557|ref|NP_995096.1| putative anti-sigma B factor antagonist [Yersinia pestis biovar
          Microtus str. 91001]
 gi|51597807|ref|YP_071998.1| anti-sigma B factor antagonist [Yersinia pseudotuberculosis IP
          32953]
 gi|108809723|ref|YP_653639.1| putative anti-sigma B factor antagonist [Yersinia pestis Antiqua]
 gi|108813613|ref|YP_649380.1| anti-sigma B factor antagonist [Yersinia pestis Nepal516]
 gi|145597642|ref|YP_001161718.1| anti-sigma B factor antagonist [Yersinia pestis Pestoides F]
 gi|153947165|ref|YP_001399445.1| anti-anti-sigma factor [Yersinia pseudotuberculosis IP 31758]
 gi|153997346|ref|ZP_02022446.1| putative anti-sigma B factor antagonist [Yersinia pestis
          CA88-4125]
 gi|162420439|ref|YP_001605688.1| putative anti-anti-sigma factor [Yersinia pestis Angola]
 gi|165928100|ref|ZP_02223932.1| putative anti-anti-sigma factor [Yersinia pestis biovar
          Orientalis str. F1991016]
 gi|165937544|ref|ZP_02226107.1| putative anti-anti-sigma factor [Yersinia pestis biovar
          Orientalis str. IP275]
 gi|166011338|ref|ZP_02232236.1| putative anti-anti-sigma factor [Yersinia pestis biovar Antiqua
          str. E1979001]
 gi|166212160|ref|ZP_02238195.1| putative anti-anti-sigma factor [Yersinia pestis biovar Antiqua
          str. B42003004]
 gi|167400702|ref|ZP_02306211.1| putative anti-anti-sigma factor [Yersinia pestis biovar Antiqua
          str. UG05-0454]
 gi|167420516|ref|ZP_02312269.1| putative anti-anti-sigma factor [Yersinia pestis biovar
          Orientalis str. MG05-1020]
 gi|167426997|ref|ZP_02318750.1| putative anti-anti-sigma factor [Yersinia pestis biovar
          Mediaevalis str. K1973002]
 gi|167470185|ref|ZP_02334889.1| putative anti-anti-sigma factor [Yersinia pestis FV-1]
 gi|170022767|ref|YP_001719272.1| putative anti-sigma B factor antagonist [Yersinia
          pseudotuberculosis YPIII]
 gi|186896999|ref|YP_001874111.1| anti-sigma B factor antagonist [Yersinia pseudotuberculosis
          PB1/+]
 gi|218930583|ref|YP_002348458.1| putative anti-sigma B factor antagonist [Yersinia pestis CO92]
 gi|229836873|ref|ZP_04457038.1| hypothetical protein YPS_0770 [Yersinia pestis Pestoides A]
 gi|229839227|ref|ZP_04459386.1| hypothetical protein YPH_1508 [Yersinia pestis biovar Orientalis
          str. PEXU2]
 gi|229899792|ref|ZP_04514933.1| hypothetical protein YPF_4291 [Yersinia pestis biovar Orientalis
          str. India 195]
 gi|229904107|ref|ZP_04519218.1| hypothetical protein YP516_3926 [Yersinia pestis Nepal516]
 gi|270488542|ref|ZP_06205616.1| anti-anti-sigma factor [Yersinia pestis KIM D27]
 gi|294505307|ref|YP_003569369.1| putative anti-sigma B factor antagonist [Yersinia pestis Z176003]
 gi|21956809|gb|AAM83736.1|AE013614_10 hypothetical protein y0142 [Yersinia pestis KIM 10]
 gi|45438426|gb|AAS63973.1| putative anti-sigma B factor antagonist [Yersinia pestis biovar
          Microtus str. 91001]
 gi|51591089|emb|CAH22753.1| Putative anti-sigma B factor antagonist [Yersinia
          pseudotuberculosis IP 32953]
 gi|108777261|gb|ABG19780.1| anti-sigma B factor antagonist [Yersinia pestis Nepal516]
 gi|108781636|gb|ABG15694.1| putative anti-sigma B factor antagonist [Yersinia pestis Antiqua]
 gi|115349194|emb|CAL22159.1| putative anti-sigma B factor antagonist [Yersinia pestis CO92]
 gi|145209338|gb|ABP38745.1| anti-sigma B factor antagonist [Yersinia pestis Pestoides F]
 gi|149288983|gb|EDM39063.1| putative anti-sigma B factor antagonist [Yersinia pestis
          CA88-4125]
 gi|152958660|gb|ABS46121.1| putative anti-anti-sigma factor [Yersinia pseudotuberculosis IP
          31758]
 gi|162353254|gb|ABX87202.1| putative anti-anti-sigma factor [Yersinia pestis Angola]
 gi|165914649|gb|EDR33263.1| putative anti-anti-sigma factor [Yersinia pestis biovar
          Orientalis str. IP275]
 gi|165919874|gb|EDR37175.1| putative anti-anti-sigma factor [Yersinia pestis biovar
          Orientalis str. F1991016]
 gi|165989722|gb|EDR42023.1| putative anti-anti-sigma factor [Yersinia pestis biovar Antiqua
          str. E1979001]
 gi|166206906|gb|EDR51386.1| putative anti-anti-sigma factor [Yersinia pestis biovar Antiqua
          str. B42003004]
 gi|166961322|gb|EDR57343.1| putative anti-anti-sigma factor [Yersinia pestis biovar
          Orientalis str. MG05-1020]
 gi|167050070|gb|EDR61478.1| putative anti-anti-sigma factor [Yersinia pestis biovar Antiqua
          str. UG05-0454]
 gi|167054037|gb|EDR63865.1| putative anti-anti-sigma factor [Yersinia pestis biovar
          Mediaevalis str. K1973002]
 gi|169749301|gb|ACA66819.1| putative anti-sigma B factor antagonist [Yersinia
          pseudotuberculosis YPIII]
 gi|186700025|gb|ACC90654.1| anti-sigma B factor antagonist [Yersinia pseudotuberculosis
          PB1/+]
 gi|229678225|gb|EEO74330.1| hypothetical protein YP516_3926 [Yersinia pestis Nepal516]
 gi|229687284|gb|EEO79359.1| hypothetical protein YPF_4291 [Yersinia pestis biovar Orientalis
          str. India 195]
 gi|229695593|gb|EEO85640.1| hypothetical protein YPH_1508 [Yersinia pestis biovar Orientalis
          str. PEXU2]
 gi|229705816|gb|EEO91825.1| hypothetical protein YPS_0770 [Yersinia pestis Pestoides A]
 gi|262363370|gb|ACY60091.1| putative anti-sigma B factor antagonist [Yersinia pestis D106004]
 gi|262367252|gb|ACY63809.1| putative anti-sigma B factor antagonist [Yersinia pestis D182038]
 gi|270337046|gb|EFA47823.1| anti-anti-sigma factor [Yersinia pestis KIM D27]
 gi|294355766|gb|ADE66107.1| putative anti-sigma B factor antagonist [Yersinia pestis Z176003]
 gi|320017113|gb|ADW00685.1| hypothetical protein YPC_4285 [Yersinia pestis biovar Medievalis
          str. Harbin 35]
          Length = 100

 Score = 42.9 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 37/90 (41%), Gaps = 8/90 (8%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---K 64
               G      +  +         +++ +D + +D+S +  +D+ G  L+++F E   +
Sbjct: 13 TLVLQGELDRETLLPLWQQ-----RETLLADKSRIDVSQLQRVDSSGLALLVHFRELQSQ 67

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIK 94
              +++ G+S  +  L  L +      ++
Sbjct: 68 RGHSLEIIGISNRLATLIELYNLQQIIPVE 97


>gi|183219914|ref|YP_001837910.1| putative anti-sigma-B factor antagonist [Leptospira biflexa
          serovar Patoc strain 'Patoc 1 (Paris)']
 gi|189910038|ref|YP_001961593.1| anti-sigma factor antagonist [Leptospira biflexa serovar Patoc
          strain 'Patoc 1 (Ames)']
 gi|167774714|gb|ABZ93015.1| Anti-sigma factor antagonist [Leptospira biflexa serovar Patoc
          strain 'Patoc 1 (Ames)']
 gi|167778336|gb|ABZ96634.1| Putative anti-sigma-B factor antagonist (Anti-anti-sigma-B
          factor) [Leptospira biflexa serovar Patoc strain 'Patoc
          1 (Paris)']
          Length = 112

 Score = 42.9 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 5/84 (5%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF-- 61
          NGI V +  GN        + + +  + ++S      I DL  ++ ID+ G  LIM    
Sbjct: 9  NGIVVLKLFGNLDMLNAGILKERIKESASQS--EHRFIFDLEGVSFIDSSGFGLIMSLND 66

Query: 62 -MEKYHGKIKLQGVSTHIEQLFSL 84
           + +  G +++  VS  I Q+F +
Sbjct: 67 KLTELGGGLRIVNVSKTIRQIFRI 90


>gi|315506297|ref|YP_004085184.1| sulfate transporter/antisigma-factor antagonist stas
           [Micromonospora sp. L5]
 gi|315412916|gb|ADU11033.1| Sulfate transporter/antisigma-factor antagonist STAS
           [Micromonospora sp. L5]
          Length = 123

 Score = 42.9 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 29/93 (31%), Gaps = 2/93 (2%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G    R AG        E+ D V  A  +        +D + +   D+ G   ++     
Sbjct: 24  GSARVRLAGELDFDTAPELVDAV--AGLRRDGHQELELDFAGVDLCDSSGLSALVVIHRA 81

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97
             G I+L  ++  I  L              Q+
Sbjct: 82  GTGAIRLLNLNPQIRHLLDRTGLAELLAAPPQE 114


>gi|294498251|ref|YP_003561951.1| PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
           [Bacillus megaterium QM B1551]
 gi|294348188|gb|ADE68517.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor [Bacillus
           megaterium QM B1551]
          Length = 922

 Score = 42.9 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 89/268 (33%), Gaps = 47/268 (17%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSY------KFKGFLLSLIRQMYYVGVSGVPVV 171
           +    N+       L  + +    F  ++       KF  F L        +G+  +  +
Sbjct: 8   LEGTYNELLVTLSFLIAITAAYASFGLANRVKISRAKFIQFWLISGACTLGIGIWSMHFI 67

Query: 172 ILISFVTGAVIAQQG-AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
            +++F     ++       LS  GA   +   + +  + +    + A++IA   GS + A
Sbjct: 68  AMLAFHLPVDVSYNLWFVLLSILGA--ITGCYIGLYLIHKQKKSIKALIIA---GSFMGA 122

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
            I  M        +  M ++ +          +I   P +  L+   A+  ++  +W   
Sbjct: 123 GIVFMH------YLGMMAMEPI----------MISYDPFIVFLSILIAVAASNTALWLG- 165

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-GVHSNSLGKKVTT- 348
                 F+S+ +       +F  +I +  M  AI  +    G         S+ +     
Sbjct: 166 ------FYSKLNE--GKLTVFAKVICSTIMGIAIAGMH-YTGMQAASFSGMSMSEHSNGF 216

Query: 349 -------CVVQSISIVIIIDSLFAIFYF 369
                   VV    IV +  ++F   + 
Sbjct: 217 ALNPIYLSVVIVFFIVCLFTAVFLTIFM 244


>gi|326318249|ref|YP_004235921.1| sulfate transporter/antisigma-factor antagonist STAS [Acidovorax
          avenae subsp. avenae ATCC 19860]
 gi|323375085|gb|ADX47354.1| Sulfate transporter/antisigma-factor antagonist STAS [Acidovorax
          avenae subsp. avenae ATCC 19860]
          Length = 105

 Score = 42.5 bits (99), Expect = 0.095,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 38/86 (44%), Gaps = 5/86 (5%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
          IT     G       +E    ++ A++ S +     +DL+ +TEID+ G +L+M      
Sbjct: 4  ITTLALDGELTIYRAAETRTGLLAALSDSPEG--LEIDLAGVTEIDSAGVQLLMAARRDA 61

Query: 66 HGK---IKLQGVSTHIEQLFSLISFT 88
            +   ++  G +  + ++ +L   +
Sbjct: 62 QARGQWLRFTGCNAPVSEVLALFDLS 87


>gi|84385523|ref|ZP_00988554.1| Anti-anti-sigma regulatory factor [Vibrio splendidus 12B01]
 gi|86146028|ref|ZP_01064355.1| Anti-anti-sigma regulatory factor [Vibrio sp. MED222]
 gi|218709510|ref|YP_002417131.1| putative anti-sigma regulatory factor [Vibrio splendidus LGP32]
 gi|84379503|gb|EAP96355.1| Anti-anti-sigma regulatory factor [Vibrio splendidus 12B01]
 gi|85836233|gb|EAQ54364.1| Anti-anti-sigma regulatory factor [Vibrio sp. MED222]
 gi|218322529|emb|CAV18688.1| putative anti-sigma regulatory factor [Vibrio splendidus LGP32]
          Length = 109

 Score = 42.5 bits (99), Expect = 0.095,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 40/101 (39%), Gaps = 6/101 (5%)

Query: 6   ITVFRFA--GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            T    +  G+  +   S  A   +  +  +       VD S +  +D+ G   I+Y  +
Sbjct: 10  TTTLTLSIFGDLDAAG-SRDAQTDIDDVISNDGHPEIEVDFSQVEFLDSSGVGAIVYMFK 68

Query: 64  KY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
           +       ++L+ V+    ++ +L+   H   + ++ P  S
Sbjct: 69  RLTERERNMRLENVTGQPLEIMNLLRIGHAIPVNSKNPTNS 109


>gi|303246824|ref|ZP_07333101.1| anti-sigma-factor antagonist [Desulfovibrio fructosovorans JJ]
 gi|302491841|gb|EFL51721.1| anti-sigma-factor antagonist [Desulfovibrio fructosovorans JJ]
          Length = 110

 Score = 42.5 bits (99), Expect = 0.098,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 37/85 (43%), Gaps = 5/85 (5%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66
           V  F+G         + + +   + K+       +DL+ +T ID+ G  L++   ++   
Sbjct: 22  VIAFSGEIDFSVTPAVRERLWELVGKA--GKHIELDLADLTYIDSSGLALLLELRKQLAE 79

Query: 67  --GKIKLQGVSTHIEQLFSLISFTH 89
               + ++ +S  + +LF+L   + 
Sbjct: 80  ADRTVAIRSISPQVRKLFNLTQLSD 104


>gi|283788170|ref|YP_003368035.1| putative anti-sigma factor antagonist [Citrobacter rodentium
          ICC168]
 gi|282951624|emb|CBG91324.1| putative anti-sigma factor antagonist [Citrobacter rodentium
          ICC168]
          Length = 98

 Score = 42.5 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 11/91 (12%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---K 64
              AG      ++ + D  V A+ +        +DLS I+ +DT G  L+++ +E   K
Sbjct: 13 TLMLAGELDQDVLNPLWDARVEAMKE-----VTCIDLSQISRVDTGGLALLVHLIELAKK 67

Query: 65 YHGKIKLQGVSTHI---EQLFSLISFTHRKK 92
              + LQGV+  +    QL++L +    + 
Sbjct: 68 QGNSVSLQGVNDKVYTLAQLYNLPADVLPRP 98


>gi|239931434|ref|ZP_04688387.1| hypothetical protein SghaA1_24659 [Streptomyces ghanaensis ATCC
           14672]
          Length = 210

 Score = 42.5 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 12/114 (10%), Positives = 33/114 (28%), Gaps = 6/114 (5%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E    +    G         +A+ +      + + D   +D+S +  +DT G E +    
Sbjct: 8   EADRALLVPRGELVRGCAHALAEKLARLPADTARVD---LDMSGVHFMDTAGLEFLDVLR 64

Query: 63  ---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYH 113
               +    +     +    ++  L        ++   P+ +    +       
Sbjct: 65  DHGRRRSVPVTATRWNGQPRRILELAGLDTADPLRRPAPEGASARAASAVSLER 118


>gi|238896698|ref|YP_002921443.1| hypothetical protein KP1_4913 [Klebsiella pneumoniae NTUH-K2044]
 gi|238549025|dbj|BAH65376.1| hypothetical protein KP1_4913 [Klebsiella pneumoniae subsp.
          pneumoniae NTUH-K2044]
          Length = 96

 Score = 42.5 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 8/80 (10%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEK 64
               G      +  + +    A      + +AI+DLS  T +DT G  L+++    + +
Sbjct: 13 TLALHGELDQDLLVPLWEARAQA-----TAGTAIIDLSQTTRVDTAGLALLVHFVALIRR 67

Query: 65 YHGKIKLQGVSTHIEQLFSL 84
             + +L G S +++ L  L
Sbjct: 68 QGREAQLVGKSENLQTLIGL 87


>gi|239978136|ref|ZP_04700660.1| putative anti-sigma factor antagonist [Streptomyces albus J1074]
          Length = 129

 Score = 42.5 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 2/94 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           SE G  V +  G+     I+ +   +  A   +  S   +VDLS +   D+    + +  
Sbjct: 21  SEGGGIVVQLGGDLDLENITPLGPALSDA--AATVSGPVVVDLSGVGFADSSTVNVFLQA 78

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKN 95
                 +++   +S  +E+LF LI       +  
Sbjct: 79  YGAIGPRLRFAALSPFVERLFGLIGLQSALPVHE 112


>gi|329997633|ref|ZP_08302890.1| hypothetical protein HMPREF9538_00528 [Klebsiella sp. MS 92-3]
 gi|328538943|gb|EGF64997.1| hypothetical protein HMPREF9538_00528 [Klebsiella sp. MS 92-3]
          Length = 95

 Score = 42.5 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 8/80 (10%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEK 64
               G      +  + +    A      + +AI+DLS  T +DT G  L+++    + +
Sbjct: 13 TLALHGELDQDLLVPLWEARAQA-----TAGTAIIDLSQTTRVDTAGLALLVHFVALIRR 67

Query: 65 YHGKIKLQGVSTHIEQLFSL 84
             + +L G S +++ L  L
Sbjct: 68 QGREAQLVGKSENLQTLIGL 87


>gi|217969737|ref|YP_002354971.1| anti-sigma-factor antagonist [Thauera sp. MZ1T]
 gi|217507064|gb|ACK54075.1| anti-sigma-factor antagonist [Thauera sp. MZ1T]
          Length = 111

 Score = 42.5 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 32/83 (38%), Gaps = 3/83 (3%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
          G+      G      ++ + +  + A+      ++  +DL  I EIDT G +L++     
Sbjct: 12 GVARLAPEGELGIYTVAALREAWLQALA---THEALEIDLGRIDEIDTAGLQLMLMAKRS 68

Query: 65 YHGKIKLQGVSTHIEQLFSLISF 87
              ++    S  + +L  L   
Sbjct: 69 VGRSVRFVNHSAAVLRLLDLARL 91


>gi|330468644|ref|YP_004406387.1| sulfate transporter/antisigma-factor antagonist stas
           [Verrucosispora maris AB-18-032]
 gi|328811615|gb|AEB45787.1| sulfate transporter/antisigma-factor antagonist stas
           [Verrucosispora maris AB-18-032]
          Length = 114

 Score = 42.5 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 31/92 (33%), Gaps = 2/92 (2%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G    R  G+       E+   V        +    ++DL+ +   D+ G   ++     
Sbjct: 16  GRAELRLTGDLDFDSAPELISAVEKLRRDGYRH--LLIDLAGVAICDSSGLSALVVAHRG 73

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96
               I+L G++ ++ QL          ++   
Sbjct: 74  SPVPIRLVGINPNLRQLLDRTGLAELLQVSPA 105


>gi|295703601|ref|YP_003596676.1| diguanylate cyclase/phosphodiesterase [Bacillus megaterium DSM 319]
 gi|294801260|gb|ADF38326.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor [Bacillus
           megaterium DSM 319]
          Length = 922

 Score = 42.5 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 87/268 (32%), Gaps = 47/268 (17%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSY------KFKGFLLSLIRQMYYVGVSGVPVV 171
           +    N+          + +    F  ++       KF  F L        +G+  +  +
Sbjct: 8   LEGTYNELLVTLSFFIAITAAYASFGLANRVKISRAKFIQFWLISGAFTLGIGIWSMHFI 67

Query: 172 ILISFVTGAVIAQQG-AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
            +++F     ++       LS  GA   +   + +  + +    + A++IA   GS + A
Sbjct: 68  AMLAFHLPVDVSYNLWFVLLSVLGA--ITGCYIGLYLIHKQKKSIKALIIA---GSFMGA 122

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
            I  M        +  M ++ +          +I   P +  L+   A+  ++  +W   
Sbjct: 123 GIVFMH------YLGMMAMEPI----------MISYDPFIVFLSILIAVAASNTALWLG- 165

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-GVHSNSLGKKVTT- 348
                 F+S+ +       +F   I +  M  AI  +    G         S+ +     
Sbjct: 166 ------FYSKLNE--GKLTVFAKFICSTIMGIAIAGMH-YTGMQAASFSGMSMSEHSNGF 216

Query: 349 -------CVVQSISIVIIIDSLFAIFYF 369
                   VV    IV +  ++F   + 
Sbjct: 217 ALNPIYLSVVIVFFIVCLFTAVFLTIFM 244


>gi|219870958|ref|YP_002475333.1| putative anti-sigma factor B antagonist [Haemophilus parasuis
           SH0165]
 gi|219691162|gb|ACL32385.1| putative anti-sigma factor B antagonist [Haemophilus parasuis
           SH0165]
          Length = 112

 Score = 42.5 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 3/90 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
             N   + + +G      +  +       ++    S     DL  +T ID+ G  L+   
Sbjct: 13  QNNESLMVQLSGELTRDTLLPLWKQRASFLSPK-SSQHIYWDLKGLTSIDSSGFTLLAEL 71

Query: 62  MEKYHGKIK--LQGVSTHIEQLFSLISFTH 89
           +  Y  K K  L  V   +  L  L     
Sbjct: 72  LHLYQQKNKNCLFNVPQAVHSLAELFDLAD 101


>gi|255592342|ref|XP_002535675.1| conserved hypothetical protein [Ricinus communis]
 gi|223522326|gb|EEF26708.1| conserved hypothetical protein [Ricinus communis]
          Length = 113

 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 27/69 (39%)

Query: 19 EISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHI 78
           I    +     +      D   +DLS I+++DT G +L++    +     K   V  H 
Sbjct: 18 TIYNAPEQKTRLLTALSGCDELELDLSQISDMDTAGFQLLVLAKREAIRAGKALNVVEHS 77

Query: 79 EQLFSLISF 87
          + +  L+  
Sbjct: 78 KAVTDLLDL 86


>gi|145300161|ref|YP_001143002.1| sulfate transporter/antisigma-factor antagonist STAS [Aeromonas
          salmonicida subsp. salmonicida A449]
 gi|142852933|gb|ABO91254.1| sulfate transporter/antisigma-factor antagonist STAS [Aeromonas
          salmonicida subsp. salmonicida A449]
          Length = 108

 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 32/81 (39%), Gaps = 3/81 (3%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
          T+ + +G       +E+   +   + +     +  +DLS ++E+D+ G +L++   +   
Sbjct: 12 TLVKISGEMTIYTAAELKQALTPLLYRQ---QALELDLSGVSEMDSAGLQLLLAAKKTMQ 68

Query: 67 GKIKLQGVSTHIEQLFSLISF 87
                 +  H   +   +  
Sbjct: 69 QGDSPLHLVMHSHAVLDALEL 89


>gi|322515304|ref|ZP_08068301.1| NTP binding protein (contains STAS domain) [Actinobacillus ureae
           ATCC 25976]
 gi|322118680|gb|EFX90892.1| NTP binding protein (contains STAS domain) [Actinobacillus ureae
           ATCC 25976]
          Length = 119

 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 10/90 (11%), Positives = 26/90 (28%), Gaps = 3/90 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
             N     + +G      +  +       ++    +     DL  +  +D+ G  L+   
Sbjct: 13  QNNESLFVKLSGELTRDTLLPLWKQRASFLSPK-GNQHIYWDLKDLERVDSAGFTLLAEL 71

Query: 62  ME--KYHGKIKLQGVSTHIEQLFSLISFTH 89
           +   +      L      ++ L  L   + 
Sbjct: 72  LNHYQKQTPNWLINSPETVKTLAELFDLSE 101


>gi|254507964|ref|ZP_05120092.1| anti-anti-sigma regulatory factor [Vibrio parahaemolyticus 16]
 gi|219549072|gb|EED26069.1| anti-anti-sigma regulatory factor [Vibrio parahaemolyticus 16]
          Length = 106

 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 37/99 (37%), Gaps = 4/99 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           + + +      GN  +   S  A   +  I          +D S +  +D+ G   I+Y 
Sbjct: 8   ASDTVLTLVINGNLDAAG-SRSAQPHIDEIIADKSDREIEIDFSQVQFLDSSGVGAIVYL 66

Query: 62  MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97
            ++       ++L+ VS    ++ +L+       + + K
Sbjct: 67  YKRLIERQRGMRLENVSGQPLEIMNLLRIDQAIPVNSSK 105


>gi|15602043|ref|NP_245115.1| hypothetical protein PM0178 [Pasteurella multocida subsp.
          multocida str. Pm70]
 gi|12720398|gb|AAK02262.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 125

 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 22/63 (34%), Gaps = 1/63 (1%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINK-SIQSDSAIVDLSAITEIDTIGAELIMY 60
            N     R AG      +  +       + +   Q  +   DL+ +  +D+ G  L+  
Sbjct: 13 QNNDKITLRLAGELSRDTLLPLWSQRASFLPEEKSQVQTLYWDLTDVARVDSAGFALLCD 72

Query: 61 FME 63
          F+ 
Sbjct: 73 FIR 75


>gi|163749279|ref|ZP_02156528.1| SpoIIAA family protein [Shewanella benthica KT99]
 gi|161330998|gb|EDQ01924.1| SpoIIAA family protein [Shewanella benthica KT99]
          Length = 100

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 36/82 (43%), Gaps = 4/82 (4%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
           +V   +G     ++ ++       ++  I+    ++DLSA++  D+ G   I+  +   
Sbjct: 8  GSVCCISGRLSQGDVVKLWGKRKRLLSAKIK----VIDLSALSYSDSAGIAFILELIALA 63

Query: 66 HGKIKLQGVSTHIEQLFSLISF 87
            + ++  +S    QL  LI+ 
Sbjct: 64 KREGRVVTLSAASSQLAKLIAL 85


>gi|294139197|ref|YP_003555175.1| SpoIIAA family protein [Shewanella violacea DSS12]
 gi|293325666|dbj|BAJ00397.1| SpoIIAA family protein [Shewanella violacea DSS12]
          Length = 100

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 42/94 (44%), Gaps = 7/94 (7%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---E 63
          +V   +G     ++ ++       ++ +I+    ++DLSA+T  D+ G   I+  +   +
Sbjct: 9  SVCCISGRLSQGDVVKLWGKRKRLLSDNIK----VIDLSALTYSDSAGIAFILELIALSK 64

Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97
          +   +I L   S+ + +L  L    H    + +K
Sbjct: 65 QQGREITLSSASSQLSKLIGLYDLEHFFDEEVKK 98


>gi|117164995|emb|CAJ88547.1| putative anti sigma factor antagonist [Streptomyces ambofaciens
           ATCC 23877]
          Length = 128

 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 36/120 (30%), Gaps = 12/120 (10%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            E+G TV    G       +EIA  +     +       ++DLS +   D  G  L+   
Sbjct: 16  QEHGHTVLELRGEIDIASAAEIAPRLEREAGR--PGARVVLDLSGVEFFDCSGLRLLYRA 73

Query: 62  MEK---YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
             +   + G++ L        ++  +                    +    L    G++ 
Sbjct: 74  RRQVLDHGGQVHLVCTHPLTLRMLRITGLARLL-------PPRATLDEVLGLTRPAGRRT 126


>gi|293394227|ref|ZP_06638527.1| anti-sigma-factor antagonist [Serratia odorifera DSM 4582]
 gi|291423205|gb|EFE96434.1| anti-sigma-factor antagonist [Serratia odorifera DSM 4582]
          Length = 100

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 9/90 (10%), Positives = 37/90 (41%), Gaps = 8/90 (8%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EK 64
              +G+     +  +         +++ +    VD++ +  +D+ G  L+++     ++
Sbjct: 13 TLVLSGDLDRETLLPLWQQ-----RETLLAGKTAVDVAQLQRVDSSGLALLVHLRAQQQR 67

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIK 94
             ++++ G +  ++ L +L +      + 
Sbjct: 68 QGVELQIIGATDRLKTLITLYNLQEIMPVD 97


>gi|271968052|ref|YP_003342248.1| anti-anti-sigma regulatory factor-like protein [Streptosporangium
          roseum DSM 43021]
 gi|270511227|gb|ACZ89505.1| Anti-anti-sigma regulatory factor (antagonist of anti-sigma
          factor)-like protein [Streptosporangium roseum DSM
          43021]
          Length = 118

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 36/87 (41%), Gaps = 1/87 (1%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          SEN   V R  G       +++   +   + +  +  + +VDLS +T +D+ G   ++  
Sbjct: 11 SENATLVLRPEGELDVNTAAQLQAWLDDYLARGPR-PATLVDLSGLTFVDSPGLAALLAM 69

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFT 88
            +  G+ +    +    Q   L+  T
Sbjct: 70 RRRLTGEGRAVAYADPTPQPARLLRIT 96


>gi|117923942|ref|YP_864559.1| anti-sigma-factor antagonist [Magnetococcus sp. MC-1]
 gi|117607698|gb|ABK43153.1| anti-sigma-factor antagonist [Magnetococcus sp. MC-1]
          Length = 105

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 27/63 (42%), Gaps = 3/63 (4%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          E      +  G+    + +E+ +  V A+      DS +++LS +T ID  G +++    
Sbjct: 7  EGSSARLQLTGDLTIQQAAELKESCVQAVQS---GDSLVLNLSGVTRIDLAGLQILCAMH 63

Query: 63 EKY 65
             
Sbjct: 64 RAL 66


>gi|325131368|gb|EGC54077.1| hypothetical protein NMBM6190_1870 [Neisseria meningitidis M6190]
 gi|325133420|gb|EGC56084.1| hypothetical protein NMBM13399_1939 [Neisseria meningitidis
          M13399]
 gi|325137486|gb|EGC60071.1| hypothetical protein NMBES14902_1850 [Neisseria meningitidis
          ES14902]
 gi|325141488|gb|EGC63961.1| hypothetical protein NMB9615945_1901 [Neisseria meningitidis
          961-5945]
 gi|325199051|gb|ADY94507.1| conserved hypothetical protein [Neisseria meningitidis G2136]
 gi|325206867|gb|ADZ02320.1| conserved hypothetical protein [Neisseria meningitidis
          M04-240196]
          Length = 92

 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 27/80 (33%), Gaps = 4/80 (5%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFMEKYH 66
              +G+     ++    +      +  +    I VD   +   D+    L++  +    
Sbjct: 9  TLHISGDITVKTLT---GEAFERFQQQCRLKETIAVDFGGVKRADSACVSLLLEVLRGCK 65

Query: 67 GKIKLQGVSTHIEQLFSLIS 86
          G ++L G+   +  L  L  
Sbjct: 66 GSVRLTGIPESVRALSELYE 85


>gi|145297396|ref|YP_001140237.1| hypothetical protein ASA_0305 [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142850168|gb|ABO88489.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 139

 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 39/83 (46%), Gaps = 9/83 (10%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G  V +F+G+ ++P+++ +         ++       ++LS +T +D+ G  L++ + + 
Sbjct: 46  GHQVMKFSGDLQAPQVNALWQR------RADWWQEDQLELSGVTTLDSAGLALLVKWAKA 99

Query: 65  ---YHGKIKLQGVSTHIEQLFSL 84
                   +L G ST    L +L
Sbjct: 100 VLVRGATPQLVGASTDFYTLANL 122


>gi|168463465|ref|ZP_02697382.1| conserved hypothetical protein [Salmonella enterica subsp.
          enterica serovar Newport str. SL317]
 gi|195633593|gb|EDX52007.1| conserved hypothetical protein [Salmonella enterica subsp.
          enterica serovar Newport str. SL317]
          Length = 98

 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 8/80 (10%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
              AG      ++ + D  V A      +    +DLS I+ +DT G  L+ +     +K
Sbjct: 13 TLVLAGELDQDVLAPLWDARVEA-----TTGVTRIDLSQISRVDTGGLALLAHLVNQAKK 67

Query: 65 YHGKIKLQGVSTHIEQLFSL 84
              + L GV+  +  L  L
Sbjct: 68 QGNAVSLSGVNDKVYALAQL 87


>gi|121635617|ref|YP_975862.1| hypothetical protein NMC1934 [Neisseria meningitidis FAM18]
 gi|120867323|emb|CAM11094.1| hypothetical protein NMC1934 [Neisseria meningitidis FAM18]
 gi|325143671|gb|EGC65990.1| hypothetical protein NMBM01240013_1912 [Neisseria meningitidis
          M01-240013]
          Length = 100

 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 27/80 (33%), Gaps = 4/80 (5%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFMEKYH 66
              +G+     ++    +      +  +    I VD   +   D+    L++  +    
Sbjct: 17 TLHISGDITVKTLT---GEAFERFQQQCRLKETIAVDFGGVKRADSACVSLLLEVLRGCK 73

Query: 67 GKIKLQGVSTHIEQLFSLIS 86
          G ++L G+   +  L  L  
Sbjct: 74 GSVRLTGIPESVRALSELYE 93


>gi|303249034|ref|ZP_07335278.1| anti-sigma-factor antagonist [Desulfovibrio fructosovorans JJ]
 gi|302489557|gb|EFL49498.1| anti-sigma-factor antagonist [Desulfovibrio fructosovorans JJ]
          Length = 259

 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 42/90 (46%), Gaps = 9/90 (10%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQ--SDSAIVDLSAITEIDTIGAELIMY 60
           E+G  V   AG+     ++ +AD +     + +Q      ++DL+ +  ID++G  L++ 
Sbjct: 164 EDGTAVVSPAGD----IVASVADALRARFKELLQEHPGGLVIDLARVELIDSVGIGLLIA 219

Query: 61  F---MEKYHGKIKLQGVSTHIEQLFSLISF 87
               + K  G++ L+ V+  +  L   +  
Sbjct: 220 VHNTLGKKGGRLVLRNVNPDLAALLRTMRL 249


>gi|326794030|ref|YP_004311850.1| sulfate transporter/antisigma-factor antagonist STAS [Marinomonas
           mediterranea MMB-1]
 gi|326544794|gb|ADZ90014.1| Sulfate transporter/antisigma-factor antagonist STAS [Marinomonas
           mediterranea MMB-1]
          Length = 109

 Score = 41.8 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 40/92 (43%), Gaps = 5/92 (5%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           V   AG      I+E  D +   +  +      + DLS +T ID+ G   I++  ++   
Sbjct: 13  VLELAGEMDCVAIAENKDAIE--LIPTTFDGDIVFDLSKVTFIDSSGIGAIVFLFKRLRE 70

Query: 68  KIK---LQGVSTHIEQLFSLISFTHRKKIKNQ 96
           + +   L G++   ++L +L+       IK+ 
Sbjct: 71  EERSLVLSGLNGQPKELMTLLRIDRAITIKDD 102


>gi|67921461|ref|ZP_00514979.1| Anti-sigma factor antagonist [Crocosphaera watsonii WH 8501]
 gi|67856573|gb|EAM51814.1| Anti-sigma factor antagonist [Crocosphaera watsonii WH 8501]
          Length = 116

 Score = 41.8 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 40/96 (41%), Gaps = 4/96 (4%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM- 59
          +++ G+ VF  +G   +  +    +++   +         +VD+  +  ID+ G   I+ 
Sbjct: 5  LTDIGVAVFEPSGYLTAANVDSFQEELTNFVT-HNPCRDFLVDMHQVEFIDSAGLMAIVS 63

Query: 60 --YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
               ++ + K+ +  +S  +  +F L       +I
Sbjct: 64 AFRLAQRLNKKLSVCCLSPSVRIIFELSQLDQALEI 99


>gi|261366788|ref|ZP_05979671.1| anti-sigma F factor antagonist [Subdoligranulum variabile DSM
          15176]
 gi|282571619|gb|EFB77154.1| anti-sigma F factor antagonist [Subdoligranulum variabile DSM
          15176]
          Length = 98

 Score = 41.8 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 35/90 (38%), Gaps = 4/90 (4%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60
          +G      +G         +  ++   ++  +  +   +D S +T +D+ G  LI+    
Sbjct: 10 SGTLAAYLSGEIDHHAAQSLRREIDAQVDDRL-PELLTLDFSGVTFMDSSGVGLILGRDR 68

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHR 90
           +    G++ +Q     + ++  L   T+ 
Sbjct: 69 HIASLGGRLTVQNPPPAVRRMLDLARITYA 98


>gi|325204912|gb|ADZ00366.1| conserved hypothetical protein [Neisseria meningitidis
          M01-240355]
          Length = 83

 Score = 41.8 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 2/77 (2%)

Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
             G+     ++  A        +    D+  VDLS +   D+    L++  +    G +
Sbjct: 2  HIGGDITVKTLTAAAFTRFRQQCRL--KDTCAVDLSGVGRADSACVSLLLEVLRGCKGSV 59

Query: 70 KLQGVSTHIEQLFSLIS 86
          +L G+   +  L  L  
Sbjct: 60 RLTGIPESVRALSELYE 76


>gi|319788305|ref|YP_004147780.1| anti-anti-sigma factor [Pseudoxanthomonas suwonensis 11-1]
 gi|317466817|gb|ADV28549.1| anti-anti-sigma factor [Pseudoxanthomonas suwonensis 11-1]
          Length = 133

 Score = 41.8 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 43/112 (38%), Gaps = 4/112 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG---AELIM 59
           +NG+     +G   +   SE+ D  +  +    +  S ++DL  +  I + G      + 
Sbjct: 12  QNGVQRIAVSGRLDTGSHSEL-DHAIDPLLADERVSSVVLDLEGLNYISSAGLRSLSRVR 70

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLH 111
             + + H  + L      I+++F ++     K +     +   + ++ +   
Sbjct: 71  RALARRHRSVLLINPQPQIQKVFDVVDAVPLKDVFASVEEADQYLDAMQRKL 122


>gi|16762071|ref|NP_457688.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica
          serovar Typhi str. CT18]
 gi|16766604|ref|NP_462219.1| hypothetical protein STM3309 [Salmonella enterica subsp. enterica
          serovar Typhimurium str. LT2]
 gi|29143560|ref|NP_806902.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica
          serovar Typhi str. Ty2]
 gi|161616319|ref|YP_001590284.1| hypothetical protein SPAB_04127 [Salmonella enterica subsp.
          enterica serovar Paratyphi B str. SPB7]
 gi|167552041|ref|ZP_02345794.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Saintpaul str. SARA29]
 gi|167994502|ref|ZP_02575593.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168238011|ref|ZP_02663069.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Schwarzengrund str. SL480]
 gi|168243145|ref|ZP_02668077.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Heidelberg str. SL486]
 gi|168262678|ref|ZP_02684651.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Hadar str. RI_05P066]
 gi|194445872|ref|YP_002042567.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Newport str. SL254]
 gi|194450078|ref|YP_002047338.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Heidelberg str. SL476]
 gi|194738002|ref|YP_002116259.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Schwarzengrund str. CVM19633]
 gi|197249208|ref|YP_002148234.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Agona str. SL483]
 gi|197262522|ref|ZP_03162596.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Saintpaul str. SARA23]
 gi|200386608|ref|ZP_03213220.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Virchow str. SL491]
 gi|213024118|ref|ZP_03338565.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Typhi str. 404ty]
 gi|213053029|ref|ZP_03345907.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Typhi str. E00-7866]
 gi|213419092|ref|ZP_03352158.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Typhi str. E01-6750]
 gi|213426648|ref|ZP_03359398.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Typhi str. E02-1180]
 gi|213584874|ref|ZP_03366700.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Typhi str. E98-0664]
 gi|213646984|ref|ZP_03377037.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Typhi str. J185]
 gi|289825819|ref|ZP_06544987.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Typhi str. E98-3139]
 gi|25512337|pir||AD0904 probable anti-sigma factor antagonist [imported] - Salmonella
          enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16421866|gb|AAL22178.1| putative STAS domain protein [Salmonella enterica subsp. enterica
          serovar Typhimurium str. LT2]
 gi|16504374|emb|CAD07826.1| possible anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Typhi]
 gi|29139195|gb|AAO70762.1| possible anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Typhi str. Ty2]
 gi|161365683|gb|ABX69451.1| hypothetical protein SPAB_04127 [Salmonella enterica subsp.
          enterica serovar Paratyphi B str. SPB7]
 gi|194404535|gb|ACF64757.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Newport str. SL254]
 gi|194408382|gb|ACF68601.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Heidelberg str. SL476]
 gi|194713504|gb|ACF92725.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Schwarzengrund str. CVM19633]
 gi|197212911|gb|ACH50308.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Agona str. SL483]
 gi|197240777|gb|EDY23397.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Saintpaul str. SARA23]
 gi|197289068|gb|EDY28437.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Schwarzengrund str. SL480]
 gi|199603706|gb|EDZ02251.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Virchow str. SL491]
 gi|205323215|gb|EDZ11054.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Saintpaul str. SARA29]
 gi|205327642|gb|EDZ14406.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205337858|gb|EDZ24622.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Heidelberg str. SL486]
 gi|205348546|gb|EDZ35177.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Hadar str. RI_05P066]
 gi|261248474|emb|CBG26311.1| possible anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Typhimurium str. D23580]
 gi|267995508|gb|ACY90393.1| hypothetical protein STM14_3997 [Salmonella enterica subsp.
          enterica serovar Typhimurium str. 14028S]
 gi|301159858|emb|CBW19377.1| possible anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Typhimurium str. SL1344]
 gi|312914336|dbj|BAJ38310.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Typhimurium str. T000240]
 gi|321225267|gb|EFX50326.1| hypothetical protein YrbB [Salmonella enterica subsp. enterica
          serovar Typhimurium str. TN061786]
 gi|323131669|gb|ADX19099.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica
          serovar Typhimurium str. 4/74]
          Length = 98

 Score = 41.8 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 8/80 (10%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
              AG      ++ + D  V A+N         +DLS I+ +DT G  L+ +     +K
Sbjct: 13 TLVLAGELDQDVLAPLWDARVEAMN-----GVTRIDLSQISRVDTGGLALLAHLVNQAKK 67

Query: 65 YHGKIKLQGVSTHIEQLFSL 84
              + L GV+  +  L  L
Sbjct: 68 QGNAVSLSGVNDKVYALAQL 87


>gi|125972642|ref|YP_001036552.1| anti-sigma-factor antagonist [Clostridium thermocellum ATCC
          27405]
 gi|256004729|ref|ZP_05429705.1| anti-sigma-factor antagonist [Clostridium thermocellum DSM 2360]
 gi|281416834|ref|ZP_06247854.1| anti-sigma-factor antagonist [Clostridium thermocellum JW20]
 gi|125712867|gb|ABN51359.1| anti-sigma-factor antagonist [Clostridium thermocellum ATCC
          27405]
 gi|255991322|gb|EEU01428.1| anti-sigma-factor antagonist [Clostridium thermocellum DSM 2360]
 gi|281408236|gb|EFB38494.1| anti-sigma-factor antagonist [Clostridium thermocellum JW20]
 gi|316941120|gb|ADU75154.1| anti-sigma-factor antagonist [Clostridium thermocellum DSM 1313]
          Length = 111

 Score = 41.8 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 38/86 (44%), Gaps = 4/86 (4%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59
          +     V    G       +E     + A      + + ++D S +T +D+ G  +IM  
Sbjct: 7  NRGNTLVAVLNGELD-HHTAEYIRQKLDAEMMKSTTKNMVLDFSKVTFMDSSGIGVIMGR 65

Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSL 84
             + K +GK+ L G++  I+++F +
Sbjct: 66 YKNIRKLNGKMSLAGINDKIKRIFEM 91


>gi|160933633|ref|ZP_02081021.1| hypothetical protein CLOLEP_02487 [Clostridium leptum DSM 753]
 gi|156867510|gb|EDO60882.1| hypothetical protein CLOLEP_02487 [Clostridium leptum DSM 753]
          Length = 130

 Score = 41.8 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 43/104 (41%), Gaps = 4/104 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59
           +++G+      G+       E+   +   I +  +    ++D   +  +D+ G  L+M  
Sbjct: 17  NQDGVLTAALTGDIDHHTARELRLAIDEVIERD-KPGLLLLDFQGVDFMDSSGIGLVMGR 75

Query: 60  -YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF 102
              M++  G++++  V  +I ++F L        ++ +   +  
Sbjct: 76  YKVMQQNGGEVEVTHVPKYISRVFKLSGLEQLGVMEKKARPQKR 119


>gi|296313908|ref|ZP_06863849.1| hypothetical protein NEIPOLOT_00771 [Neisseria polysaccharea ATCC
          43768]
 gi|296839442|gb|EFH23380.1| hypothetical protein NEIPOLOT_00771 [Neisseria polysaccharea ATCC
          43768]
          Length = 100

 Score = 41.8 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 27/79 (34%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
               G+     ++  A +      +    ++  VD   +   D+    L++  +    G
Sbjct: 17 TLHIGGDITVKTLTRDAFERFRQQCRL--KETIAVDFGGVKRADSACVSLLLEVLRGCKG 74

Query: 68 KIKLQGVSTHIEQLFSLIS 86
           ++L G+   +  L  L  
Sbjct: 75 SVRLTGIPESVRALSELYE 93


>gi|302519937|ref|ZP_07272279.1| anti-sigma F factor antagonist [Streptomyces sp. SPB78]
 gi|318056975|ref|ZP_07975698.1| putative anti-sigma factor antagonist [Streptomyces sp. SA3_actG]
 gi|318081223|ref|ZP_07988555.1| putative anti-sigma factor antagonist [Streptomyces sp. SA3_actF]
 gi|302428832|gb|EFL00648.1| anti-sigma F factor antagonist [Streptomyces sp. SPB78]
          Length = 124

 Score = 41.8 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 34/82 (41%), Gaps = 5/82 (6%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59
            +G  V R AG         +   V  A+ +     S ++DLS +   D+ G  +++  
Sbjct: 9  ERDGWAVLRVAGEMDLVSSPSVRQRVHEAVAR--GRHSVVLDLSEVHFCDSSGVGVLIAA 66

Query: 60 -YFMEKYHGKIKLQGVSTHIEQ 80
             M   HG++++   +   E+
Sbjct: 67 RRLMRSCHGRLRIVLPARGAEE 88


>gi|154499844|ref|ZP_02037882.1| hypothetical protein BACCAP_03501 [Bacteroides capillosus ATCC
           29799]
 gi|150271442|gb|EDM98699.1| hypothetical protein BACCAP_03501 [Bacteroides capillosus ATCC
           29799]
          Length = 135

 Score = 41.8 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 10/91 (10%), Positives = 30/91 (32%), Gaps = 4/91 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            E+       +G         +  ++   ++  +      +DLS +T +D+ G  +++  
Sbjct: 41  GEDRNLRLTVSGEVDHHGARAVMQELDRQVDAGL-PKRLTLDLSGVTFMDSSGIAVLLRA 99

Query: 62  MEK---YHGKIKLQGVSTHIEQLFSLISFTH 89
             +     G + +  V     ++        
Sbjct: 100 YRRMAELGGALTVANVPPQALKVLRAAGLER 130


>gi|295838221|ref|ZP_06825154.1| conserved hypothetical protein [Streptomyces sp. SPB74]
 gi|197696633|gb|EDY43566.1| conserved hypothetical protein [Streptomyces sp. SPB74]
          Length = 124

 Score = 41.8 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 34/82 (41%), Gaps = 5/82 (6%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59
            +G  V R AG         +   V  A+ +     S ++DLS +   D+ G  +++  
Sbjct: 9  ERDGWAVLRVAGEMDLVSSPSVRQRVHEAVAR--GRHSVVLDLSQVHFCDSSGVGVLIAA 66

Query: 60 -YFMEKYHGKIKLQGVSTHIEQ 80
             M   HG++++   +   E+
Sbjct: 67 RRLMRSCHGRLRIVLPARGAEE 88


>gi|157148762|ref|YP_001456081.1| hypothetical protein CKO_04594 [Citrobacter koseri ATCC BAA-895]
 gi|157085967|gb|ABV15645.1| hypothetical protein CKO_04594 [Citrobacter koseri ATCC BAA-895]
          Length = 97

 Score = 41.8 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 8/80 (10%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
              AG      ++ + D  V A+      D   +DLS ++ +D+ G  L+++     ++
Sbjct: 13 TLALAGELDQDVLNPLWDARVDAMK-----DVTCIDLSQVSRVDSGGLALLVHLVDQAKR 67

Query: 65 YHGKIKLQGVSTHIEQLFSL 84
              + LQGV+  +  L  L
Sbjct: 68 QGNSVSLQGVNEKVYTLAKL 87


>gi|270263236|ref|ZP_06191506.1| anti-sigma-factor antagonist [Serratia odorifera 4Rx13]
 gi|270042924|gb|EFA16018.1| anti-sigma-factor antagonist [Serratia odorifera 4Rx13]
          Length = 100

 Score = 41.8 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 39/86 (45%), Gaps = 10/86 (11%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          S+    + R  G      +  + +       +++ +D   +D+S +  +D+ G  L+++ 
Sbjct: 9  SQQQTLILR--GELDRETLLPLWEQ-----RETLLADKTALDVSQLQRVDSSGLALLVHL 61

Query: 62 MEKYHGK---IKLQGVSTHIEQLFSL 84
           E+   +   +K+ G +  ++ L +L
Sbjct: 62 REQQRQRGVELKISGATDRLKTLIAL 87


>gi|196232813|ref|ZP_03131663.1| anti-sigma-factor antagonist [Chthoniobacter flavus Ellin428]
 gi|196223012|gb|EDY17532.1| anti-sigma-factor antagonist [Chthoniobacter flavus Ellin428]
          Length = 116

 Score = 41.8 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 39/91 (42%), Gaps = 5/91 (5%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG-AELI-- 58
          S+ G+ V    G        ++    ++      +S + ++D   +T +D+ G A LI  
Sbjct: 7  SDQGVQVLAIDGEIDLACSPDL--RTLLHAYAKKKSPALLLDFQGVTYVDSSGLATLIEY 64

Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
          +   + + GK  L  VS  +  +F L+  + 
Sbjct: 65 VRLAQPFGGKFGLAHVSERVRTIFDLVRLSE 95


>gi|148657866|ref|YP_001278071.1| anti-sigma-factor antagonist [Roseiflexus sp. RS-1]
 gi|148569976|gb|ABQ92121.1| anti-sigma-factor antagonist [Roseiflexus sp. RS-1]
          Length = 117

 Score = 41.8 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 39/110 (35%), Gaps = 5/110 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--- 58
            ++G+T+ R  G       +++  D+   +         I DL  ++ +D+ G   +   
Sbjct: 8   GDDGVTIVRMEGRLDLLTAADVKRDLADLVAD--GRRRLIFDLERVSFVDSSGLGALISG 65

Query: 59  MYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFK 108
           +    +  G +++   +  I  L  L +     +      +    Y S  
Sbjct: 66  LKAARQVGGDLRIARANEQIRTLLKLTTLERVLRPYETIEEARAGYTSIA 115


>gi|269137866|ref|YP_003294566.1| putative anti-sigma B factor antagonist [Edwardsiella tarda
          EIB202]
 gi|267983526|gb|ACY83355.1| putative anti-sigma B factor antagonist [Edwardsiella tarda
          EIB202]
 gi|304557919|gb|ADM40583.1| anti-sigma-factor antagonist [Edwardsiella tarda FL6-60]
          Length = 104

 Score = 41.4 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 35/90 (38%), Gaps = 6/90 (6%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME-KYH 66
               G  +   +  +         +++ +D   VD+S ++ +D+ G  L+++    +  
Sbjct: 15 TLYLQGALECDSLDALWQQ-----RQTLLTDITCVDISELSRVDSAGLALLLHVQNLRPE 69

Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96
            I L+GVS  +  L +L +          
Sbjct: 70 TPIPLRGVSERLRTLITLYNLQDIVVCAAP 99


>gi|150389980|ref|YP_001320029.1| anti-sigma-factor antagonist [Alkaliphilus metalliredigens QYMF]
 gi|149949842|gb|ABR48370.1| anti-sigma-factor antagonist [Alkaliphilus metalliredigens QYMF]
          Length = 111

 Score = 41.4 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 4/89 (4%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60
          + + + +F G        EI  ++   I +  +    I+DLS +T +D+ G  +I+    
Sbjct: 9  DHVLIVKFTGELDHHVAEEIRGELDETIAQK-RMKHLILDLSEMTFMDSSGIGVIIGRYK 67

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
           + K  GK+ +  V   I ++F L    H
Sbjct: 68 NITKLGGKVAVINVPEKINKIFKLAGLYH 96


>gi|167628450|ref|YP_001678949.1| anti-sigma f factor antagonist [Heliobacterium modesticaldum
          Ice1]
 gi|167591190|gb|ABZ82938.1| anti-sigma f factor antagonist [Heliobacterium modesticaldum
          Ice1]
          Length = 115

 Score = 41.4 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 34/88 (38%), Gaps = 5/88 (5%)

Query: 1  MSENG-ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
          +  NG   V R  G         +   +   I +  ++   + +L  +  ID+ G   I+
Sbjct: 3  IDRNGNALVVRLQGEIDLCAAEALRPRLDKEIERQ-KAKHLVFNLRGVDFIDSSGIGFIL 61

Query: 60 ---YFMEKYHGKIKLQGVSTHIEQLFSL 84
               ++   GK+ L G +  + ++  L
Sbjct: 62 GRYKRVKALGGKVALAGPTRSVHRIIEL 89


>gi|53804224|ref|YP_113888.1| anti-anti-sigma factor family protein [Methylococcus capsulatus
          str. Bath]
 gi|53757985|gb|AAU92276.1| anti-anti-sigma factor family protein [Methylococcus capsulatus
          str. Bath]
          Length = 114

 Score = 41.4 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 42/91 (46%), Gaps = 5/91 (5%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59
          +++ + +    G     + ++   +++  + +   +   +VDLS +  +D+ G  +++  
Sbjct: 7  TQDNVDIVELGGRLVMADAAQARSELLAVVRR--GTGRLVVDLSDVGFVDSSGLSVLIAA 64

Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
             +E+  GK+ L G+S  I+ L  L     
Sbjct: 65 FKAIEERSGKMVLAGLSPEIQALLELTRLNE 95


>gi|21233628|ref|NP_639545.1| hypothetical protein XCC4211 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66770593|ref|YP_245355.1| hypothetical protein XC_4300 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21115497|gb|AAM43427.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66575925|gb|AAY51335.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 102

 Score = 41.4 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 12/97 (12%), Positives = 38/97 (39%), Gaps = 8/97 (8%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           +  NG T    +G      ++++    +  +     + +  +DLS +  +D+ G  ++  
Sbjct: 12  LQRNGDT-LAVSGVLDRAAVTDLWPRALAQL-----AGARTLDLSGVQRLDSAGVAMLAE 65

Query: 61  FMEKYH--GKIKLQGVSTHIEQLFSLISFTHRKKIKN 95
              +    G   + G ++ +++L +    +     + 
Sbjct: 66  LAARLRSNGNGTVVGKASGLDELCAAYRLSPSLDFQA 102


>gi|226329323|ref|ZP_03804841.1| hypothetical protein PROPEN_03228 [Proteus penneri ATCC 35198]
 gi|225202509|gb|EEG84863.1| hypothetical protein PROPEN_03228 [Proteus penneri ATCC 35198]
          Length = 91

 Score = 41.4 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 8/85 (9%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
          V  F G      +  +         K++ +D  I+D+SA+  ID+ G  L ++    ME+
Sbjct: 7  VLYFQGTLDRETLLSVWQQ-----RKALLADINIIDISALGHIDSTGLALFVHLKAEMEE 61

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89
           + +  +QGVS   + L +L     
Sbjct: 62 RNRQFIIQGVSERFQTLITLYDLDE 86


>gi|304413075|ref|ZP_07394548.1| cytoplasmic protein with a STAS domain [Candidatus Regiella
          insecticola LSR1]
 gi|304283918|gb|EFL92311.1| cytoplasmic protein with a STAS domain [Candidatus Regiella
          insecticola LSR1]
          Length = 98

 Score = 41.4 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 35/84 (41%), Gaps = 9/84 (10%)

Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM----EKYH 66
            G+     +  +       +     +D   +D++ +  +D+ G  L+++ +    ++ +
Sbjct: 16 LQGDLDRDTLLPLWQQRNKLL-----TDIDCIDVTQLHRVDSAGLALLVHLIHFKSQQQN 70

Query: 67 GKIKLQGVSTHIEQLFSLISFTHR 90
           K+ + G+S  +  L  L +   R
Sbjct: 71 IKLAISGISDQLATLIKLYNLPGR 94


>gi|253686690|ref|YP_003015880.1| hypothetical protein PC1_0285 [Pectobacterium carotovorum subsp.
          carotovorum PC1]
 gi|251753268|gb|ACT11344.1| conserved hypothetical protein [Pectobacterium carotovorum subsp.
          carotovorum PC1]
          Length = 98

 Score = 41.4 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 33/84 (39%), Gaps = 7/84 (8%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK--Y 65
               G+     +            +S+     ++D+S +  +D+ G  L+M+  ++   
Sbjct: 15 TLALTGDLDRETLLPFWQQ-----RESLLMGKTVLDVSGLNRVDSAGLALLMHVYQQPSS 69

Query: 66 HGKIKLQGVSTHIEQLFSLISFTH 89
            +I + G S  ++ L +L +   
Sbjct: 70 GREITIVGASDRLKTLIALYNLNE 93


>gi|269126689|ref|YP_003300059.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183]
 gi|268311647|gb|ACY98021.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183]
          Length = 117

 Score = 41.4 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 32/81 (39%), Gaps = 4/81 (4%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
          TV    G      +  +   V  A          ++D++A+T +D+ G   ++   ++  
Sbjct: 19 TVLELTGELDLAGLPALRRRVDEACAAP-GPPRLVIDMAAVTFMDSCGLGGLVRCWKRVG 77

Query: 67 ---GKIKLQGVSTHIEQLFSL 84
             G+  L G+   + ++  +
Sbjct: 78 ERQGRFILVGLRPQVARVLDI 98


>gi|62181817|ref|YP_218234.1| STAS domain-containing protein [Salmonella enterica subsp.
          enterica serovar Choleraesuis str. SC-B67]
 gi|168231920|ref|ZP_02656978.1| putative stas domain protein [Salmonella enterica subsp. enterica
          serovar Kentucky str. CDC 191]
 gi|168819621|ref|ZP_02831621.1| putative stas domain protein [Salmonella enterica subsp. enterica
          serovar Weltevreden str. HI_N05-537]
 gi|194470672|ref|ZP_03076656.1| conserved hypothetical protein [Salmonella enterica subsp.
          enterica serovar Kentucky str. CVM29188]
 gi|198244440|ref|YP_002217280.1| hypothetical protein SeD_A3668 [Salmonella enterica subsp.
          enterica serovar Dublin str. CT_02021853]
 gi|204931203|ref|ZP_03221997.1| putative stas domain protein [Salmonella enterica subsp. enterica
          serovar Javiana str. GA_MM04042433]
 gi|205354210|ref|YP_002228011.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica
          serovar Gallinarum str. 287/91]
 gi|207858557|ref|YP_002245208.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica
          serovar Enteritidis str. P125109]
 gi|224585106|ref|YP_002638905.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica
          serovar Paratyphi C strain RKS4594]
 gi|238910103|ref|ZP_04653940.1| possible anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Tennessee str. CDC07-0191]
 gi|62129450|gb|AAX67153.1| putative STAS domain [Salmonella enterica subsp. enterica serovar
          Choleraesuis str. SC-B67]
 gi|194457036|gb|EDX45875.1| conserved hypothetical protein [Salmonella enterica subsp.
          enterica serovar Kentucky str. CVM29188]
 gi|197938956|gb|ACH76289.1| putative stas domain protein [Salmonella enterica subsp. enterica
          serovar Dublin str. CT_02021853]
 gi|204319970|gb|EDZ05176.1| putative stas domain protein [Salmonella enterica subsp. enterica
          serovar Javiana str. GA_MM04042433]
 gi|205273991|emb|CAR38997.1| possible anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Gallinarum str. 287/91]
 gi|205333847|gb|EDZ20611.1| putative stas domain protein [Salmonella enterica subsp. enterica
          serovar Kentucky str. CDC 191]
 gi|205343356|gb|EDZ30120.1| putative stas domain protein [Salmonella enterica subsp. enterica
          serovar Weltevreden str. HI_N05-537]
 gi|206710360|emb|CAR34718.1| possible anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Enteritidis str. P125109]
 gi|224469634|gb|ACN47464.1| possible anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Paratyphi C strain RKS4594]
 gi|320087754|emb|CBY97518.1| Uncharacterized protein yrbB [Salmonella enterica subsp. enterica
          serovar Weltevreden str. 2007-60-3289-1]
 gi|322615313|gb|EFY12234.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica
          serovar Montevideo str. 315996572]
 gi|322618328|gb|EFY15219.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica
          serovar Montevideo str. 495297-1]
 gi|322622867|gb|EFY19711.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 495297-3]
 gi|322626811|gb|EFY23608.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 495297-4]
 gi|322631380|gb|EFY28140.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 515920-1]
 gi|322635353|gb|EFY32067.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 515920-2]
 gi|322643352|gb|EFY39916.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 531954]
 gi|322647076|gb|EFY43577.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322648879|gb|EFY45324.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. OH_2009072675]
 gi|322655071|gb|EFY51382.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322657674|gb|EFY53942.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 19N]
 gi|322664170|gb|EFY60368.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 81038-01]
 gi|322667453|gb|EFY63615.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674701|gb|EFY70793.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 414877]
 gi|322675666|gb|EFY71739.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 366867]
 gi|322682302|gb|EFY78325.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 413180]
 gi|322684905|gb|EFY80903.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 446600]
 gi|322716306|gb|EFZ07877.1| STAS domain-containing protein [Salmonella enterica subsp.
          enterica serovar Choleraesuis str. A50]
 gi|323195890|gb|EFZ81061.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 609458-1]
 gi|323199007|gb|EFZ84104.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 556150-1]
 gi|323204293|gb|EFZ89302.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 609460]
 gi|323207640|gb|EFZ92587.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 507440-20]
 gi|323211307|gb|EFZ96151.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 556152]
 gi|323214751|gb|EFZ99500.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. MB101509-0077]
 gi|323221231|gb|EGA05657.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. MB102109-0047]
 gi|323224028|gb|EGA08321.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. MB110209-0055]
 gi|323230323|gb|EGA14442.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. MB111609-0052]
 gi|323233299|gb|EGA17393.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 2009083312]
 gi|323239336|gb|EGA23386.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 2009085258]
 gi|323242413|gb|EGA26439.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 315731156]
 gi|323246923|gb|EGA30889.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. IA_2009159199]
 gi|323254144|gb|EGA37964.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. IA_2010008282]
 gi|323255261|gb|EGA39038.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. IA_2010008283]
 gi|323262724|gb|EGA46280.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. IA_2010008284]
 gi|323264034|gb|EGA47542.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. IA_2010008285]
 gi|323269420|gb|EGA52875.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. IA_2010008287]
 gi|326625059|gb|EGE31404.1| STAS domain-containing protein [Salmonella enterica subsp.
          enterica serovar Dublin str. 3246]
 gi|326629332|gb|EGE35675.1| STAS domain-containing protein [Salmonella enterica subsp.
          enterica serovar Gallinarum str. 9]
          Length = 98

 Score = 41.4 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 8/80 (10%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
              AG      ++ + D  V A+     +    +DLS I+ +DT G  L+ +     +K
Sbjct: 13 TLVLAGELDQDVLAPLWDARVEAM-----TGVTRIDLSQISRVDTGGLALLAHLVNQAKK 67

Query: 65 YHGKIKLQGVSTHIEQLFSL 84
              + L GV+  +  L  L
Sbjct: 68 QGNAVSLSGVNDKVYALAQL 87


>gi|83589261|ref|YP_429270.1| anti-sigma-factor antagonist domain-containing protein [Moorella
          thermoacetica ATCC 39073]
 gi|83572175|gb|ABC18727.1| anti-sigma-factor antagonist (STAS) domain protein [Moorella
          thermoacetica ATCC 39073]
          Length = 109

 Score = 41.4 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 36/86 (41%), Gaps = 8/86 (9%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
          E   +V R AG      I+++  ++         +    +D SA+  +D+ GA L++   
Sbjct: 11 EKDRSVLRVAGELDFSNINQLQQEIERQ-----DTKIVEIDCSALQFMDSSGAGLLLSIA 65

Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLI 85
            +   +  +++  +  HI     +I
Sbjct: 66 RVLNLQNRILEITHIPEHIYHDLDII 91


>gi|296534459|ref|ZP_06896891.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
 gi|296265215|gb|EFH11408.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
          Length = 58

 Score = 41.4 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 5/53 (9%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA 55
          +    V R  G + +  +  +   ++ A        +  +DLS +T +DT GA
Sbjct: 11 DRQGEVLRLRGAYTTQSVGPVWQGLLRAAR-----GATRLDLSGVTALDTTGA 58


>gi|162450573|ref|YP_001612940.1| hypothetical protein sce2301 [Sorangium cellulosum 'So ce 56']
 gi|161161155|emb|CAN92460.1| hypothetical protein sce2301 [Sorangium cellulosum 'So ce 56']
          Length = 298

 Score = 41.4 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 37/86 (43%), Gaps = 4/86 (4%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            G+ V    G   +    ++ ++++  + +  Q+  AI+D++ + +IDT  A  ++    
Sbjct: 182 QGVLVLPLVGALDAARAQQMMENLLGKVVER-QARVAIIDVTGVPDIDTASASALLQVAR 240

Query: 64  K---YHGKIKLQGVSTHIEQLFSLIS 86
                  ++ L G+   + Q    + 
Sbjct: 241 AVRLLGAQVVLTGIRPEVSQAIVRLD 266


>gi|317121979|ref|YP_004101982.1| anti-sigma-factor antagonist [Thermaerobacter marianensis DSM
           12885]
 gi|315591959|gb|ADU51255.1| anti-sigma-factor antagonist [Thermaerobacter marianensis DSM
           12885]
          Length = 117

 Score = 41.0 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 13/107 (12%), Positives = 35/107 (32%), Gaps = 4/107 (3%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62
             + R AG++     +E+    +    +    D  +V+L  +  ID+ G   ++      
Sbjct: 11  TLIARLAGDFD-EHGAEVFRHAIERAVRRRAYDHLVVNLQQVGFIDSSGLGALLGRYRRA 69

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
            +   ++ + G    +  +  +     R  +   +P           
Sbjct: 70  REDGARVSVVGAPPPVRAVLQMAGLPQRIPLYPDEPAALGAARGVGR 116


>gi|319651420|ref|ZP_08005549.1| anti-sigma F factor antagonist [Bacillus sp. 2_A_57_CT2]
 gi|317396951|gb|EFV77660.1| anti-sigma F factor antagonist [Bacillus sp. 2_A_57_CT2]
          Length = 116

 Score = 41.0 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 39/82 (47%), Gaps = 4/82 (4%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62
          +   R +G        E+ +    AI +       I++L  ++ +D+ G  +I+     +
Sbjct: 13 VLCIRLSGELDHHSADELREQATRAIEEH-DIHHIILNLEQLSFMDSSGLGVILGRYKQI 71

Query: 63 EKYHGKIKLQGVSTHIEQLFSL 84
          ++ HG++ +  +S  +++LF +
Sbjct: 72 KQKHGEMVVCAISPAVQRLFDM 93


>gi|29826775|ref|NP_821409.1| anti-sigma factor antagonist [Streptomyces avermitilis MA-4680]
 gi|29603871|dbj|BAC67944.1| putative anti-sigma factor antagonist [Streptomyces avermitilis
           MA-4680]
          Length = 162

 Score = 41.0 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 35/85 (41%), Gaps = 5/85 (5%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MY 60
           +GI +    G         + + ++  I +       + D   +T +D+ G  ++     
Sbjct: 62  DGIRIVVLRGEIDHANRDSLHEALL--IPEGEAEPRTVADFRGVTFMDSSGINVLITAHR 119

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLI 85
             +   G ++L GV   ++++ +L+
Sbjct: 120 AAQDAGGWLRLAGVQEPVQRVLALV 144


>gi|309388695|gb|ADO76575.1| anti-sigma-factor antagonist [Halanaerobium praevalens DSM 2228]
          Length = 115

 Score = 41.0 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 43/85 (50%), Gaps = 3/85 (3%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
          E    V +F G       +++ + V   +  + + D  I+DL+ ++ +D+ G  L++   
Sbjct: 11 EANKAVIKFEGEVNFENSNQLKEKVKAELITNEEVDVLIIDLAQVSYLDSSGVGLLLSLF 70

Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSL 84
           FM+K  G +K+   +  ++++F +
Sbjct: 71 KFMQKRDGSLKVVNPNAKLKRVFDV 95


>gi|165976708|ref|YP_001652301.1| putative anti-sigma factor B antagonist [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|307246206|ref|ZP_07528287.1| hypothetical protein appser1_14100 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307250540|ref|ZP_07532484.1| hypothetical protein appser4_13200 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307255186|ref|ZP_07537004.1| hypothetical protein appser9_14220 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307259624|ref|ZP_07541348.1| hypothetical protein appser11_14220 [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|165876809|gb|ABY69857.1| putative anti-sigma factor B antagonist [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|306852815|gb|EFM85039.1| hypothetical protein appser1_14100 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306857433|gb|EFM89545.1| hypothetical protein appser4_13200 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306862059|gb|EFM94035.1| hypothetical protein appser9_14220 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306866269|gb|EFM98133.1| hypothetical protein appser11_14220 [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 117

 Score = 41.0 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 28/90 (31%), Gaps = 3/90 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
             N     + +G      +  +       ++    +     DL  +  +D+ G  L+   
Sbjct: 13  QNNESLFVKLSGELTRDTLLPLWRQRASFLSPK-GNQHIYWDLKDLERVDSAGFTLLAEL 71

Query: 62  MEKYHGKIK--LQGVSTHIEQLFSLISFTH 89
           +  Y  +    L  V   ++ L  L   T 
Sbjct: 72  LNYYQKQTPNCLIHVPEVVKTLADLFDLTD 101


>gi|83646437|ref|YP_434872.1| anti-anti-sigma regulatory factor [Hahella chejuensis KCTC 2396]
 gi|83634480|gb|ABC30447.1| Anti-anti-sigma regulatory factor (antagonist of anti-sigma
          factor) [Hahella chejuensis KCTC 2396]
          Length = 88

 Score = 41.0 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 31/81 (38%), Gaps = 9/81 (11%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
              G       +E    +       ++     +DLS +TE+D  G +L++  + K    
Sbjct: 14 LTLNGELTIYCAAEAKAPL-------LEHKDIDIDLSQLTELDGAGLQLLI--LAKRDRG 64

Query: 69 IKLQGVSTHIEQLFSLISFTH 89
           +L   S  + ++FSL     
Sbjct: 65 ARLVNASEAVNKVFSLTGLAD 85


>gi|291614052|ref|YP_003524209.1| anti-sigma-factor antagonist [Sideroxydans lithotrophicus ES-1]
 gi|291584164|gb|ADE11822.1| anti-sigma-factor antagonist [Sideroxydans lithotrophicus ES-1]
          Length = 108

 Score = 41.0 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 6/89 (6%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          S +G   F   G       +E+ D +   IN    +D   +DLS ++EID+ G +L++  
Sbjct: 7  SSSGKAGFAIEGELTIYRAAELKDVIYPHIN---HADVIEIDLSRVSEIDSAGLQLLVSA 63

Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLISF 87
            +      ++ L G S  ++++  L   
Sbjct: 64 KLEAMIRDKQLHLVGHSKPVQEMLDLCDL 92


>gi|157373329|ref|YP_001471929.1| hypothetical protein Ssed_0188 [Shewanella sediminis HAW-EB3]
 gi|157315703|gb|ABV34801.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3]
          Length = 98

 Score = 41.0 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 27/67 (40%), Gaps = 6/67 (8%)

Query: 16 KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK---IKLQ 72
              I  I   +   +          +D+S ++ +DT GA+L+  F +  + +   ++ Q
Sbjct: 13 TIRNIQPIFARLSELLT---HDKLLHIDVSQLSRVDTAGAQLLYLFSQTCNARSLKVEWQ 69

Query: 73 GVSTHIE 79
          G    + 
Sbjct: 70 GGQPELR 76


>gi|78355071|ref|YP_386520.1| anti-anti-sigma regulatory factor, SpoIIAA [Desulfovibrio
          desulfuricans subsp. desulfuricans str. G20]
 gi|78217476|gb|ABB36825.1| anti-anti-sigma regulatory factor, SpoIIAA [Desulfovibrio
          desulfuricans subsp. desulfuricans str. G20]
          Length = 105

 Score = 41.0 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 38/92 (41%), Gaps = 7/92 (7%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +S+NG  +    G       +++   +   I  S    + ++D+  ++ ID+ G  L++ 
Sbjct: 8  ISDNGALI--LEGEIDYSVAAQVRTALHRHIESS--GGAVVLDMEKVSYIDSTGLALLIE 63

Query: 61 FMEKYH---GKIKLQGVSTHIEQLFSLISFTH 89
             K      +I++   S  + QLF L     
Sbjct: 64 LRRKLQEQSREIRISAASVRVRQLFELTQIAP 95


>gi|213586477|ref|ZP_03368303.1| hypothetical protein SentesTyph_36473 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 77

 Score = 41.0 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 25/72 (34%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++I+   
Sbjct: 5   ALAALGHSGIKTVRTFGRAGLMLFNAIIGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGV 64

Query: 177 VTGAVIAQQGAF 188
             G V+  QG  
Sbjct: 65  FIGMVLGLQGYL 76


>gi|303250630|ref|ZP_07336827.1| putative anti-sigma factor B antagonist [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307252923|ref|ZP_07534811.1| hypothetical protein appser6_14340 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|302650618|gb|EFL80777.1| putative anti-sigma factor B antagonist [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306859561|gb|EFM91586.1| hypothetical protein appser6_14340 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 117

 Score = 41.0 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 29/90 (32%), Gaps = 3/90 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
             N     + +G      +  +       ++    +     DL  +  +D+ G  L++  
Sbjct: 13  QNNESLFVKLSGELTRDTLLPLWKQRASFLSPK-GNQHIYWDLKDLERVDSAGFTLLVEL 71

Query: 62  MEKYHGKIK--LQGVSTHIEQLFSLISFTH 89
           +  Y  +    L  V   ++ L  L   T 
Sbjct: 72  LNYYQKQTPNCLIHVPEVVKTLADLFDLTD 101


>gi|192361462|ref|YP_001983402.1| STAS domain-containing protein [Cellvibrio japonicus Ueda107]
 gi|190687627|gb|ACE85305.1| STAS domain protein [Cellvibrio japonicus Ueda107]
          Length = 101

 Score = 41.0 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 36/80 (45%), Gaps = 3/80 (3%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
           T   F G      +S++ D +       + S    +DL +++E+DT G +L++ F+ ++
Sbjct: 11 TTTLVFDGELTIYTVSQLKDALFA--EPEVSSAKVALDLQSVSELDTAGVQLLL-FIRQF 67

Query: 66 HGKIKLQGVSTHIEQLFSLI 85
             +  + V     +L   +
Sbjct: 68 FSAVAKEVVLAKTNELVDAV 87


>gi|309378877|emb|CBX22464.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 92

 Score = 41.0 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 28/79 (35%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
          +    G+     ++E  D+      +    ++  VD   +   D+    L++  + +   
Sbjct: 9  ILHIGGDITVKTLTE--DEFERFRQQCRLKETIAVDFGGVKRADSACVSLLLEILRRRKD 66

Query: 68 KIKLQGVSTHIEQLFSLIS 86
           I L G+   +  L  L  
Sbjct: 67 SIGLTGIPESVRALSELYE 85


>gi|85713025|ref|ZP_01044062.1| STAS domain protein [Idiomarina baltica OS145]
 gi|85693128|gb|EAQ31089.1| STAS domain protein [Idiomarina baltica OS145]
          Length = 100

 Score = 40.6 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 39/91 (42%), Gaps = 7/91 (7%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          ++ +G      AG+     I    + +   +N+        VD++ +T IDT G  +++ 
Sbjct: 10 LANDGT--LSLAGSLTRSAIPAQWNALSQLLNEKT---VKQVDVAEVTLIDTAGVAILLE 64

Query: 61 FMEKYHGKIKLQ--GVSTHIEQLFSLISFTH 89
           ++     + LQ  G S  + Q+ ++    H
Sbjct: 65 VIKHNRDAVPLQCKGSSEQLRQIVTVSGVDH 95


>gi|312961185|ref|ZP_07775690.1| sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          fluorescens WH6]
 gi|311284843|gb|EFQ63419.1| sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          fluorescens WH6]
          Length = 112

 Score = 40.6 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 6/87 (6%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           GI      G      ++E+A ++   + +   +    +DLS +TEID  G +L+     
Sbjct: 9  EGIARVGIEGELTIYTVAELAAEL---LPQLGTAPRLELDLSQVTEIDGAGLQLLAVIHR 65

Query: 64 KYHG---KIKLQGVSTHIEQLFSLISF 87
          +       + L G S  + Q   L + 
Sbjct: 66 EAAAGGTPVSLVGQSQAVTQTLQLCAA 92


>gi|238793700|ref|ZP_04637322.1| Anti-sigma B factor antagonist [Yersinia intermedia ATCC 29909]
 gi|238726941|gb|EEQ18473.1| Anti-sigma B factor antagonist [Yersinia intermedia ATCC 29909]
          Length = 106

 Score = 40.6 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 33/99 (33%), Gaps = 14/99 (14%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---- 63
                G      +  +       +     +    +D+S +  +D+ G  L+++F E    
Sbjct: 13  TLVLQGELDRETLLPLWQQREALL-----AGKTRIDVSQLQRVDSSGLALLVHFRELHFL 67

Query: 64  -----KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97
                K    + + GVS  +  L  L +      ++  +
Sbjct: 68  HEPQSKPGVSLMITGVSDRLSTLIELYNLQQIIPVEMAR 106


>gi|24375437|ref|NP_719480.1| SpoIIAA family protein [Shewanella oneidensis MR-1]
 gi|24350281|gb|AAN56924.1|AE015826_9 SpoIIAA family protein [Shewanella oneidensis MR-1]
          Length = 94

 Score = 40.6 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 11/84 (13%), Positives = 32/84 (38%), Gaps = 4/84 (4%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
              +    G     ++  +       +++    D+ I+ LS +   D+ G   ++  + 
Sbjct: 6  QQGNICHLKGRLSQDQVIALWPQRQSLLSQ----DTQILSLSELEYSDSAGVAFLLALVR 61

Query: 64 KYHGKIKLQGVSTHIEQLFSLISF 87
          ++   ++L   S  +++L  L   
Sbjct: 62 QHATPLQLCSASAQLKKLIDLYDL 85


>gi|157372589|ref|YP_001480578.1| anti-sigma-factor antagonist [Serratia proteamaculans 568]
 gi|157324353|gb|ABV43450.1| anti-sigma-factor antagonist [Serratia proteamaculans 568]
          Length = 99

 Score = 40.6 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 41/86 (47%), Gaps = 10/86 (11%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          S+    + R  G      +  + +       +++ +D  ++D++ +  +D+ G  L+++ 
Sbjct: 8  SQQQTLILR--GELDRETLLPLWEQ-----RETLLADITVLDVTQLQRVDSSGLALLVHL 60

Query: 62 ME---KYHGKIKLQGVSTHIEQLFSL 84
           E   ++  ++K+ G S  ++ L +L
Sbjct: 61 REQQRQHGVELKISGASDRLKTLITL 86


>gi|330954309|gb|EGH54569.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae Cit 7]
          Length = 96

 Score = 40.6 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 6/87 (6%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--- 58
          S N     +  G      ++E+A  ++  I  + +     VDLS +TE+D  G +L+   
Sbjct: 7  STNDTARVQIDGELTIYTVTELAARLLPQIGAAAR---LEVDLSQVTEMDGAGLQLLAVI 63

Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLI 85
               K    + L G S  + + F L 
Sbjct: 64 QREAGKTGTSLHLTGQSKAVSETFELC 90


>gi|157373876|ref|YP_001472476.1| SpoIIAA family protein [Shewanella sediminis HAW-EB3]
 gi|157316250|gb|ABV35348.1| SpoIIAA family protein [Shewanella sediminis HAW-EB3]
          Length = 100

 Score = 40.6 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 42/83 (50%), Gaps = 5/83 (6%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          E+G+ V R +G     E+ ++  +    ++KS+Q    ++DLSA++  D+ G   ++  +
Sbjct: 6  EDGV-VCRVSGRLSQVEVVKLWSERDTLMSKSVQ----VIDLSALSYSDSAGVAFLLELL 60

Query: 63 EKYHGKIKLQGVSTHIEQLFSLI 85
               + +   +S+   QL  LI
Sbjct: 61 SLAKSESRKLVLSSPSIQLLKLI 83


>gi|149191258|ref|ZP_01869514.1| anti-anti-sigma regulatory factor [Vibrio shilonii AK1]
 gi|148834928|gb|EDL51909.1| anti-anti-sigma regulatory factor [Vibrio shilonii AK1]
          Length = 110

 Score = 40.6 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 36/99 (36%), Gaps = 4/99 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           + N        G++ +    E    +   I+         VDLS +  +D+ G   I+Y 
Sbjct: 8   TNNHTLKLELYGDFDARGSREAQPQIDDIIHNDW-HQEIEVDLSQVRFMDSSGIGAIVYL 66

Query: 62  MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97
            ++      K++L+ V+    Q+  L+       +    
Sbjct: 67  YKRLVERERKMRLENVTGQPLQIIQLLRIGQAIPVNTHA 105


>gi|167854681|ref|ZP_02477461.1| hypothetical protein HPS_01277 [Haemophilus parasuis 29755]
 gi|167854218|gb|EDS25452.1| hypothetical protein HPS_01277 [Haemophilus parasuis 29755]
          Length = 112

 Score = 40.6 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 28/89 (31%), Gaps = 3/89 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
             N   + + +G      +  +       ++          DL  +T ID+ G  L+   
Sbjct: 13  QNNESLMVQLSGELTRDTLLPLWKQRASFLSPK-SLQHIYWDLKGLTSIDSSGFTLLAEL 71

Query: 62  MEKYHGKIK--LQGVSTHIEQLFSLISFT 88
           +  Y  K K  L  V   +  L  L    
Sbjct: 72  LHLYQQKNKNCLFNVPQAVHSLAELFDLA 100


>gi|323499084|ref|ZP_08104064.1| putative anti-sigma F factor antagonist [Vibrio sinaloensis DSM
           21326]
 gi|323315919|gb|EGA68950.1| putative anti-sigma F factor antagonist [Vibrio sinaloensis DSM
           21326]
          Length = 106

 Score = 40.6 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 4/95 (4%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
           I      GN  +   S  A   +  I          +D S +  +D+ G   I+Y  ++ 
Sbjct: 12  ILTLVINGNLDADG-SRNAQPHIDEIIADKSEREIEIDFSHVQFLDSSGVGAIVYLYKRL 70

Query: 66  ---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97
                 ++++ VS    ++ +L+       + +QK
Sbjct: 71  IERQRSMRIENVSGQPLEIMNLLRIDQAIPVNSQK 105


>gi|188993826|ref|YP_001905836.1| hypothetical protein xccb100_4431 [Xanthomonas campestris pv.
          campestris str. B100]
 gi|167735586|emb|CAP53804.1| hypothetical protein xcc-b100_4431 [Xanthomonas campestris pv.
          campestris]
          Length = 97

 Score = 40.2 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 12/97 (12%), Positives = 38/97 (39%), Gaps = 8/97 (8%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +  NG T    +G      ++++    +  +     + +  +DLS +  +D+ G  ++  
Sbjct: 7  LQRNGDT-LAVSGVLDRAAVTDLWPRALAQL-----AGARTLDLSGVQRLDSAGVAMLAE 60

Query: 61 FMEKYH--GKIKLQGVSTHIEQLFSLISFTHRKKIKN 95
             +    G   + G ++ +++L +    +     + 
Sbjct: 61 LAARLRSNGNGTVVGKASGLDELCAAYRLSPSLDFQA 97


>gi|56415238|ref|YP_152313.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica
          serovar Paratyphi A str. ATCC 9150]
 gi|197364168|ref|YP_002143805.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica
          serovar Paratyphi A str. AKU_12601]
 gi|56129495|gb|AAV79001.1| possible anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Paratyphi A str. ATCC 9150]
 gi|197095645|emb|CAR61213.1| possible anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Paratyphi A str. AKU_12601]
          Length = 98

 Score = 40.2 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 8/80 (10%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
              AG      ++ + D  V A+     +    +DLS I+ +DT G  L+ +     +K
Sbjct: 13 TLMLAGELDQDVLAPLWDARVEAM-----TGVTRIDLSQISRVDTGGLALLAHLVNQAKK 67

Query: 65 YHGKIKLQGVSTHIEQLFSL 84
              + L GV+  +  L  L
Sbjct: 68 QGNAVSLSGVNDKVYALAQL 87


>gi|32035040|ref|ZP_00135106.1| COG3113: Predicted NTP binding protein (contains STAS domain)
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|126208754|ref|YP_001053979.1| hypothetical protein APL_1288 [Actinobacillus pleuropneumoniae L20]
 gi|190150608|ref|YP_001969133.1| hypothetical protein APP7_1339 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|303252082|ref|ZP_07338251.1| putative anti-sigma factor B antagonist [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307248313|ref|ZP_07530338.1| hypothetical protein appser2_12910 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307257354|ref|ZP_07539124.1| hypothetical protein appser10_13520 [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|307263953|ref|ZP_07545556.1| hypothetical protein appser13_13610 [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|126097546|gb|ABN74374.1| hypothetical protein APL_1288 [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
 gi|189915739|gb|ACE61991.1| hypothetical protein APP7_1339 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|302649064|gb|EFL79251.1| putative anti-sigma factor B antagonist [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|306855183|gb|EFM87361.1| hypothetical protein appser2_12910 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306864204|gb|EFM96117.1| hypothetical protein appser10_13520 [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306870715|gb|EFN02456.1| hypothetical protein appser13_13610 [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 117

 Score = 40.2 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 28/90 (31%), Gaps = 3/90 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
             N     + +G      +  +       ++    +     DL  +  +D+ G  L+   
Sbjct: 13  QNNESLFVKLSGELTRDTLLPLWKQRASFLSPK-GNQHIYWDLKDLERVDSAGFTLLAEL 71

Query: 62  MEKYHGKIK--LQGVSTHIEQLFSLISFTH 89
           +  Y  +    L  V   ++ L  L   T 
Sbjct: 72  LNYYQKQTPNCLIHVPEVVKTLADLFDLTD 101


>gi|294497068|ref|YP_003560768.1| anti-sigma B factor antagonist [Bacillus megaterium QM B1551]
 gi|295702433|ref|YP_003595508.1| anti-sigma B factor antagonist [Bacillus megaterium DSM 319]
 gi|294347005|gb|ADE67334.1| anti-sigma B factor antagonist [Bacillus megaterium QM B1551]
 gi|294800092|gb|ADF37158.1| anti-sigma B factor antagonist [Bacillus megaterium DSM 319]
          Length = 110

 Score = 40.2 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 46/100 (46%), Gaps = 11/100 (11%)

Query: 3   ENGITVFRFAG---NWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
           +      + AG    + +P++ E   ++       I     IVDL+ ++ +D+ G  + +
Sbjct: 10  DGQAYRIKLAGEIDAYTAPKLKEKFMEITEHTEPEI-----IVDLTDVSYMDSTGLGVFI 64

Query: 60  YFM---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96
             +   +K +G +K  GVS  I++LF +   T    + +Q
Sbjct: 65  ALLKANKKNNGSLKFVGVSERIKRLFDITGLTDILNVNSQ 104


>gi|332111478|gb|EGJ11461.1| hypothetical protein RBXJA2T_14076 [Rubrivivax benzoatilyticus
          JA2]
          Length = 100

 Score = 40.2 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 32/82 (39%), Gaps = 1/82 (1%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
               G       +E+ + ++ A+  +   D   +DLSA+TE D+ G +L+M   +    
Sbjct: 5  TLAIEGELTIYRAAELRETLLAALAAAPDGD-LTLDLSAVTEFDSAGVQLLMAAKKSAEA 63

Query: 68 KIKLQGVSTHIEQLFSLISFTH 89
          + +   +  H   +        
Sbjct: 64 RSRALRLVRHSPSVLDGFQVLD 85


>gi|295097678|emb|CBK86768.1| Predicted NTP binding protein (contains STAS domain)
          [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 97

 Score = 40.2 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 36/86 (41%), Gaps = 9/86 (10%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          + +G T     G      ++ + D    A+         ++DL  +T +DT G  L+ + 
Sbjct: 8  ARDGET-LTLTGELDQDLLNPLWDARHNAMQ-----GVTLIDLHGVTRVDTAGIALLAHL 61

Query: 62 M---EKYHGKIKLQGVSTHIEQLFSL 84
          +   +K    + L GVS ++  L  L
Sbjct: 62 VATGKKQGSSVTLTGVSDNVITLAQL 87


>gi|330872540|gb|EGH06689.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. morsprunorum str. M302280PT]
          Length = 96

 Score = 40.2 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 6/85 (7%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MY 60
          +     +  G      ++E+A  ++  I  + +     VDLS +TE+D  G +L+     
Sbjct: 9  DDTARIQIDGELTIYTVTELAARLLPQIGSAAR---VEVDLSHVTEMDGAGLQLLAVIQR 65

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLI 85
            EK    + L G S  + + F L 
Sbjct: 66 EAEKTGTALHLTGQSKAVTETFELC 90


>gi|254380525|ref|ZP_04995891.1| hypothetical protein SSAG_00193 [Streptomyces sp. Mg1]
 gi|194339436|gb|EDX20402.1| hypothetical protein SSAG_00193 [Streptomyces sp. Mg1]
          Length = 172

 Score = 40.2 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 35/82 (42%), Gaps = 6/82 (7%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
            T     G       S +          ++  ++ ++DLSA+T +D+ G  +++    + 
Sbjct: 83  RTALTLTGALDMDTCSRVT---ATTDTLTLDGNTLVLDLSAVTFMDSSGLNMLLTLRNRA 139

Query: 66  H---GKIKLQGVSTHIEQLFSL 84
               G ++L+G+   + +L  +
Sbjct: 140 EAEQGTLELRGLPGQVLRLLDI 161


>gi|330810306|ref|YP_004354768.1| hypothetical protein PSEBR_a3440 [Pseudomonas brassicacearum
          subsp. brassicacearum NFM421]
 gi|327378414|gb|AEA69764.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
          brassicacearum NFM421]
          Length = 94

 Score = 40.2 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 36/90 (40%), Gaps = 6/90 (6%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59
          + +        G       +++A   +  +  + +     +DLS ITE+D  G +L++  
Sbjct: 7  THDDTAQVHIDGELTIYTAADLAAQWLPHLGATPR---MALDLSQITEMDGAGLQLLLMV 63

Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLISFT 88
               K   ++ L G S  + +  +L +  
Sbjct: 64 QREAAKAGTQLTLTGQSKAVTETLALCNLV 93


>gi|206578164|ref|YP_002236397.1| hypothetical protein KPK_0520 [Klebsiella pneumoniae 342]
 gi|288933381|ref|YP_003437440.1| hypothetical protein Kvar_0498 [Klebsiella variicola At-22]
 gi|290511568|ref|ZP_06550937.1| hypothetical protein HMPREF0485_03339 [Klebsiella sp. 1_1_55]
 gi|206567222|gb|ACI08998.1| conserved hypothetical protein [Klebsiella pneumoniae 342]
 gi|288888110|gb|ADC56428.1| conserved hypothetical protein [Klebsiella variicola At-22]
 gi|289776561|gb|EFD84560.1| hypothetical protein HMPREF0485_03339 [Klebsiella sp. 1_1_55]
          Length = 96

 Score = 40.2 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 31/80 (38%), Gaps = 8/80 (10%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEK 64
               G      +  + +    A        + I+DLS  T +DT G  L+++    + +
Sbjct: 13 TLALHGELDQDLLVPLWEARARATE-----GATIIDLSQTTRVDTAGLALLVHFVALIRR 67

Query: 65 YHGKIKLQGVSTHIEQLFSL 84
             + +L   S +++ L  L
Sbjct: 68 QGREAQLIAKSENLQTLIGL 87


>gi|209809117|ref|YP_002264655.1| hypothetical protein, putative anti-sigma factor antagonist
           [Aliivibrio salmonicida LFI1238]
 gi|208010679|emb|CAQ81066.1| hypothetical protein, putative anti-sigma factor antagonist
           [Aliivibrio salmonicida LFI1238]
          Length = 105

 Score = 40.2 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 13/94 (13%), Positives = 35/94 (37%), Gaps = 5/94 (5%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
             V    G+  +    +I   +   I +  +     +DL+ +  +D+ G   I+Y  ++ 
Sbjct: 12  TLVLSVQGDMDAVGCRDIQPTIDEVIEQ--EHRQVHIDLAQVAFLDSSGIGAIVYLYKRL 69

Query: 66  ---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96
                 +++Q       +L  L+   +   + + 
Sbjct: 70  VEKERTMQIQNAHGQPLELLKLLRIENAIPVNSP 103


>gi|229822117|ref|YP_002883643.1| anti-sigma-factor antagonist [Beutenbergia cavernae DSM 12333]
 gi|229568030|gb|ACQ81881.1| anti-sigma-factor antagonist [Beutenbergia cavernae DSM 12333]
          Length = 128

 Score = 40.2 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 31/83 (37%), Gaps = 3/83 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           + +  T    AG        ++AD V  A    +  +   +D + +  +D+ G  L+   
Sbjct: 21  TTDDRTRIVLAGEIDVSLAGDLADAVGRA---ELAGNPTEIDAAQVAFMDSSGIALLARV 77

Query: 62  MEKYHGKIKLQGVSTHIEQLFSL 84
             +  G++ +      +  L  +
Sbjct: 78  ATRTPGRLAIISPPDVVRFLLEV 100


>gi|117620668|ref|YP_855579.1| anti-sigma-B factor antagonist [Aeromonas hydrophila subsp.
          hydrophila ATCC 7966]
 gi|117562075|gb|ABK39023.1| anti-sigma-B factor antagonist [Aeromonas hydrophila subsp.
          hydrophila ATCC 7966]
          Length = 108

 Score = 40.2 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 26/59 (44%), Gaps = 3/59 (5%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
          TV   AG       +E+   +   + +        +DLS ++E+D+ G +L++   +  
Sbjct: 12 TVVTIAGEMTIYTAAELKQALTPLLYRQ---QELELDLSQVSEMDSAGLQLLLAAKKTA 67


>gi|225174856|ref|ZP_03728853.1| anti-sigma-factor antagonist [Dethiobacter alkaliphilus AHT 1]
 gi|225169496|gb|EEG78293.1| anti-sigma-factor antagonist [Dethiobacter alkaliphilus AHT 1]
          Length = 111

 Score = 40.2 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 34/91 (37%), Gaps = 4/91 (4%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62
             V R  G      +  I D +   +       + + + S +  +D+ G  +++     +
Sbjct: 11  TLVVRMTGELDHHAVDGIRDRLDRKLAVE-HIKNVVFNFSGVQFMDSSGLGMVLGRYKLI 69

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
            +  GK+    +S  + ++F L     R  +
Sbjct: 70  SEKGGKVLACSLSPRVSRVFDLAGLQSRIPV 100


>gi|149921651|ref|ZP_01910100.1| sigma-B regulator RsbR [Plesiocystis pacifica SIR-1]
 gi|149817495|gb|EDM76965.1| sigma-B regulator RsbR [Plesiocystis pacifica SIR-1]
          Length = 318

 Score = 40.2 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 37/91 (40%), Gaps = 4/91 (4%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G+      G+  +     + + ++ AI  S  +  A++D++ +  IDT  A+ ++  + 
Sbjct: 210 DGVLALPLLGSLTTTRAQALMERLLEAIQAS-STRFALIDVTGVDTIDTATADHLLRVVR 268

Query: 64  K---YHGKIKLQGVSTHIEQLFSLISFTHRK 91
                  +  + G+   + Q    +     +
Sbjct: 269 ATAMLGTQCIVTGIQPAVAQTLVTLETNLEE 299


>gi|66044042|ref|YP_233883.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. syringae B728a]
 gi|63254749|gb|AAY35845.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. syringae B728a]
 gi|330971850|gb|EGH71916.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. aceris str. M302273PT]
          Length = 96

 Score = 40.2 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 6/87 (6%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--- 58
          S N     +  G      ++E+A  ++  I  + +     VDLS +TE+D  G +L+   
Sbjct: 7  SANDTARVQIDGELTIYTVTELAARLLPQIGAAAR---LEVDLSQVTEMDGAGLQLLAVI 63

Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLI 85
               K    + L G S  + + F L 
Sbjct: 64 QREAGKTGTSLHLTGQSKAVSETFELC 90


>gi|298485494|ref|ZP_07003578.1| STAS domain protein [Pseudomonas savastanoi pv. savastanoi NCPPB
          3335]
 gi|298160000|gb|EFI01037.1| STAS domain protein [Pseudomonas savastanoi pv. savastanoi NCPPB
          3335]
          Length = 96

 Score = 40.2 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 6/87 (6%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--- 58
          ++   T  +  G      ++E+A  +   + K   +    VDLS +TE+D  G +L+   
Sbjct: 7  NQADATRVQIDGELTIYTVTELAARL---LPKITGAARVEVDLSQVTEMDGAGLQLLAVI 63

Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLI 85
               K    +++ G S  + + F L 
Sbjct: 64 QREAGKTGTSLRMTGQSKAVTETFELC 90


>gi|291615989|ref|YP_003518731.1| YrbB [Pantoea ananatis LMG 20103]
 gi|291151019|gb|ADD75603.1| YrbB [Pantoea ananatis LMG 20103]
 gi|327396241|dbj|BAK13663.1| anti-sigma factor antagonist YrbB [Pantoea ananatis AJ13355]
          Length = 98

 Score = 40.2 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 34/80 (42%), Gaps = 8/80 (10%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---K 64
            R  G      +  + +     +N        ++D+SA+  +D+ G  L+++  E   +
Sbjct: 13 TLRLEGELDRDTLLSLWEQREALVNA-----VELIDVSALQRVDSSGLALLVHLREITSQ 67

Query: 65 YHGKIKLQGVSTHIEQLFSL 84
            G ++  G+   ++ L +L
Sbjct: 68 QGGSLRFVGIGDKLQSLITL 87


>gi|256828162|ref|YP_003156890.1| anti-sigma-factor antagonist [Desulfomicrobium baculatum DSM
          4028]
 gi|256577338|gb|ACU88474.1| anti-sigma-factor antagonist [Desulfomicrobium baculatum DSM
          4028]
          Length = 117

 Score = 40.2 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 43/81 (53%), Gaps = 5/81 (6%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
          TVFR  G   +   +E+   V++ +++ +     I+D S +  I++ G  +++   ++ H
Sbjct: 12 TVFRIKGRLDATSTTELEQKVLLRLDRGVTH--LIMDFSELEYINSAGLRILVMSYQRLH 69

Query: 67 ---GKIKLQGVSTHIEQLFSL 84
             G++ + GV  +I ++F +
Sbjct: 70 SRGGQVMVCGVRDYIAEIFEI 90


>gi|261342636|ref|ZP_05970494.1| putative STAS domain protein [Enterobacter cancerogenus ATCC
          35316]
 gi|288315284|gb|EFC54222.1| putative STAS domain protein [Enterobacter cancerogenus ATCC
          35316]
          Length = 97

 Score = 40.2 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 38/80 (47%), Gaps = 8/80 (10%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EK 64
            +  G      ++ + D  V A+         ++DL+++T +DT G  ++ + +   +K
Sbjct: 13 TLKLKGELDQDLLNPLWDARVDAMK-----GVTLIDLNSVTRVDTAGVAMLAHLVAVGKK 67

Query: 65 YHGKIKLQGVSTHIEQLFSL 84
          +  +++L G S ++  L  L
Sbjct: 68 HGTQVRLAGASDNVVTLAQL 87


>gi|330966331|gb|EGH66591.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. actinidiae str. M302091]
          Length = 96

 Score = 40.2 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 6/85 (7%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MY 60
          +     +  G      ++E+A  ++  I  + +     VDLS +TE+D  G +L+     
Sbjct: 9  DDTARIQIDGELTIYTVTELAARLLPQIGSAAR---VEVDLSHVTEMDGAGLQLLAVIQR 65

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLI 85
            EK    + L G S  + + F L 
Sbjct: 66 EAEKTGTALHLTGQSKAVTETFELC 90


>gi|302555986|ref|ZP_07308328.1| anti-sigma factor antagonist [Streptomyces viridochromogenes DSM
           40736]
 gi|302473604|gb|EFL36697.1| anti-sigma factor antagonist [Streptomyces viridochromogenes DSM
           40736]
          Length = 160

 Score = 40.2 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 2/67 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            E G TV  F G       SEIA  +    ++   +   ++DLS I   D  G  L+   
Sbjct: 50  QERGHTVLEFCGEIDLAAASEIAPHLDRETDR--PAARVVIDLSGIEFFDCSGLRLLYRA 107

Query: 62  MEKYHGK 68
             +   +
Sbjct: 108 RSRVLDR 114


>gi|114776921|ref|ZP_01451964.1| anti-sigma factor antagonist, putative [Mariprofundus
          ferrooxydans PV-1]
 gi|114553007|gb|EAU55438.1| anti-sigma factor antagonist, putative [Mariprofundus
          ferrooxydans PV-1]
          Length = 109

 Score = 40.2 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 13/88 (14%), Positives = 34/88 (38%), Gaps = 5/88 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---M 59
          +N   + R  G+        + +++    + S++     +D   +  +D+ G   +   +
Sbjct: 13 DNQAVLLRVKGDVTIHTSPRLREELKPLFSASMKEVHVALD--DVGFMDSSGIATLVEGL 70

Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISF 87
           +     G   L G+S ++  +F L   
Sbjct: 71 QWARMTGGHFVLSGLSENVRDVFELAKL 98


>gi|283836262|ref|ZP_06356003.1| putative STAS domain protein [Citrobacter youngae ATCC 29220]
 gi|291067626|gb|EFE05735.1| putative STAS domain protein [Citrobacter youngae ATCC 29220]
          Length = 97

 Score = 39.8 bits (92), Expect = 0.59,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 8/79 (10%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EKY 65
             AG      ++ + D  V A+        + +DL+ ++ +DT G  L+++ +   ++ 
Sbjct: 14 LVLAGELDQDVLNPLWDARVEAMQ-----GVSCIDLNQVSRVDTGGLALLLHLIDQGKQQ 68

Query: 66 HGKIKLQGVSTHIEQLFSL 84
            ++ L GV+  +  L  L
Sbjct: 69 GNRVSLAGVNDKVYTLAQL 87


>gi|329911604|ref|ZP_08275574.1| hypothetical protein IMCC9480_548 [Oxalobacteraceae bacterium
          IMCC9480]
 gi|327545838|gb|EGF30955.1| hypothetical protein IMCC9480_548 [Oxalobacteraceae bacterium
          IMCC9480]
          Length = 100

 Score = 39.8 bits (92), Expect = 0.60,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 27/59 (45%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             +G     +++E    +  A+     SD  ++DL+ +TE D  G +L++ F +    
Sbjct: 6  ITISGELTIYQVAETRALLQRALTDHDGSDQLMLDLAGVTECDGAGVQLLLAFSQAVAA 64


>gi|261819646|ref|YP_003257752.1| hypothetical protein Pecwa_0292 [Pectobacterium wasabiae WPP163]
 gi|261603659|gb|ACX86145.1| conserved hypothetical protein [Pectobacterium wasabiae WPP163]
          Length = 96

 Score = 39.8 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          +   +     G+     +            +S+ ++   +D+S +  +D+ G  L+M+  
Sbjct: 8  QAQESTLALIGDLDRETLLPFWQQ-----RESLLAEKTTLDVSGLNRVDSAGLALLMHVY 62

Query: 63 EK--YHGKIKLQGVSTHIEQLFSLISFTH 89
          ++     +I + G S  ++ L +L +   
Sbjct: 63 QQPYSGDEITIVGASDRLKTLIALYNLNE 91


>gi|15644192|ref|NP_229241.1| anti-sigma factor antagonist, putative [Thermotoga maritima MSB8]
 gi|170289123|ref|YP_001739361.1| anti-sigma-factor antagonist [Thermotoga sp. RQ2]
 gi|281412788|ref|YP_003346867.1| anti-sigma-factor antagonist [Thermotoga naphthophila RKU-10]
 gi|7227948|sp|Q9X1F5|Y1442_THEMA RecName: Full=Putative anti-sigma factor antagonist TM_1442
 gi|55670421|pdb|1VC1|A Chain A, Crystal Structure Of The Tm1442 Protein From Thermotoga
          Maritima, A Homolog Of The Bacillus Subtilis General
          Stress Response Anti-Anti-Sigma Factor Rsbv
 gi|55670422|pdb|1VC1|B Chain B, Crystal Structure Of The Tm1442 Protein From Thermotoga
          Maritima, A Homolog Of The Bacillus Subtilis General
          Stress Response Anti-Anti-Sigma Factor Rsbv
 gi|58176711|pdb|1SBO|A Chain A, Solution Structure Of Putative Anti Sigma Factor
          Antagonist From Thermotoga Maritima (Tm1442)
 gi|4982007|gb|AAD36511.1|AE001796_3 anti-sigma factor antagonist, putative [Thermotoga maritima MSB8]
 gi|170176626|gb|ACB09678.1| anti-sigma-factor antagonist [Thermotoga sp. RQ2]
 gi|281373891|gb|ADA67453.1| anti-sigma-factor antagonist [Thermotoga naphthophila RKU-10]
          Length = 110

 Score = 39.8 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 43/89 (48%), Gaps = 1/89 (1%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          + ++   + R  G+  +   SE+ + +   I+ + +    ++DLS+++ +D+ G   ++ 
Sbjct: 9  VEQDDKAIVRVQGDIDAYNSSELKEQLRNFISTTSK-KKIVLDLSSVSYMDSAGLGTLVV 67

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
           ++      K   +S+  E +  ++  TH
Sbjct: 68 ILKDAKINGKEFILSSLKESISRILKLTH 96


>gi|238758305|ref|ZP_04619483.1| Anti-sigma B factor antagonist [Yersinia aldovae ATCC 35236]
 gi|238703428|gb|EEP95967.1| Anti-sigma B factor antagonist [Yersinia aldovae ATCC 35236]
          Length = 100

 Score = 39.8 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 39/97 (40%), Gaps = 10/97 (10%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +S+    +    G      +  +     + +     +D   +D+S +  +D+ G  L+++
Sbjct: 8  LSQQETLI--LQGELDRETLLPLWQQREVLL-----ADKTHIDVSQLQRVDSSGLALLVH 60

Query: 61 FME---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIK 94
          F E   +    + + GVS  +  L  L +  H   ++
Sbjct: 61 FRELRARQGVSLTVIGVSDRLSTLIELYNLQHIIPVE 97


>gi|229818799|ref|YP_002880325.1| anti-sigma-factor antagonist [Beutenbergia cavernae DSM 12333]
 gi|229564712|gb|ACQ78563.1| anti-sigma-factor antagonist [Beutenbergia cavernae DSM 12333]
          Length = 124

 Score = 39.8 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 33/100 (33%), Gaps = 6/100 (6%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            G  V R    W   + +   D               ++D   +T ID+ G   I+   +
Sbjct: 17  GGGVVIRI---WGEVDAALRDDASAAMAAVLADPGPVVIDARDVTFIDSTGLAFILQLHK 73

Query: 64  ---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100
              +   ++ L+  +  + +L  L +     +++      
Sbjct: 74  HGSEESREVVLRDPAPRLTELLELAAVGDLVRVERTPVPP 113


>gi|284045931|ref|YP_003396271.1| anti-sigma-factor antagonist [Conexibacter woesei DSM 14684]
 gi|283950152|gb|ADB52896.1| anti-sigma-factor antagonist [Conexibacter woesei DSM 14684]
          Length = 119

 Score = 39.8 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 14/97 (14%), Positives = 37/97 (38%), Gaps = 5/97 (5%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            G    R  G +    +  + D +  A +   Q     +DL  +T +D+ G   I+   +
Sbjct: 23  GGTYRMRLRGEFDLAAVETVEDALARAFDGDTQ--LLEIDLGQLTFLDSSGLRTILEARD 80

Query: 64  KYHG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97
           +      +++L      ++++F++          ++ 
Sbjct: 81  RAASSGVRLRLVRGIEPVQRVFAITGLEASLPFADEP 117


>gi|156935715|ref|YP_001439631.1| hypothetical protein ESA_03584 [Cronobacter sakazakii ATCC
          BAA-894]
 gi|156533969|gb|ABU78795.1| hypothetical protein ESA_03584 [Cronobacter sakazakii ATCC
          BAA-894]
          Length = 100

 Score = 39.8 bits (92), Expect = 0.66,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 34/79 (43%), Gaps = 8/79 (10%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EKY 65
           R  G      ++ + +       +SI      +DLS +  +DT G  L+++ +   +  
Sbjct: 14 LRLNGTLDRETLTPLWEQ-----RQSITDGLQRIDLSGLERVDTAGLALLVHLVALTQAG 68

Query: 66 HGKIKLQGVSTHIEQLFSL 84
             + L+G+S ++  L  L
Sbjct: 69 GRGVTLEGMSENLTTLAKL 87


>gi|300785987|ref|YP_003766278.1| fused protein kinase and phosphatase containing multi-sensor domain
           [Amycolatopsis mediterranei U32]
 gi|299795501|gb|ADJ45876.1| fused protein kinase and phosphatase containing multi-sensor domain
           [Amycolatopsis mediterranei U32]
          Length = 899

 Score = 39.8 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 27/64 (42%), Gaps = 1/64 (1%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G    +  G+     I E+   V+ ++  +  + S +VDL+ +  + + G  L++     
Sbjct: 799 GPLALKLTGDLDLATIGEVRPAVLASVEATA-TRSVVVDLTGLRYLSSCGVALLLDVAAV 857

Query: 65  YHGK 68
              +
Sbjct: 858 ARRR 861


>gi|15639529|ref|NP_218979.1| anti-sigma F factor antagonist (SpoIIAA-2) [Treponema pallidum
           subsp. pallidum str. Nichols]
 gi|189025768|ref|YP_001933540.1| anti-sigma F factor antagonist [Treponema pallidum subsp. pallidum
           SS14]
 gi|3322830|gb|AAC65524.1| anti-sigma F factor antagonist (spoIIAA-2) [Treponema pallidum
           subsp. pallidum str. Nichols]
 gi|189018343|gb|ACD70961.1| anti-sigma F factor antagonist [Treponema pallidum subsp. pallidum
           SS14]
          Length = 123

 Score = 39.8 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 43/108 (39%), Gaps = 5/108 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
              GI V   +G+       ++ D V+   ++  +    ++DL A+  ID+ G  +++Y 
Sbjct: 9   QSGGICVVDISGDMDLYHSYKLKDLVLKLFDRGPRC--IVIDLEAVEYIDSSGIGVLIYL 66

Query: 62  ---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106
              ++K      + GV   ++++  L    +   I     +      S
Sbjct: 67  CSTVKKLKIHFFISGVHGSVKKVIELTRLLNYFPIAESVDEALARARS 114


>gi|291545017|emb|CBL18126.1| anti-anti-sigma factor [Ruminococcus sp. 18P13]
          Length = 110

 Score = 39.8 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 37/86 (43%), Gaps = 4/86 (4%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--- 58
          +E GI      G        ++ + +   + + +     I+D + +T +D+ G  L+   
Sbjct: 6  TEEGILRVMLQGEIDHHSAGQLREQIDCRLEELL-PKRLILDFTGVTFMDSSGIGLVMGR 64

Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSL 84
          +     Y G++++   + HI ++  L
Sbjct: 65 VRQAAAYGGQVEIAVPAGHIRKVMQL 90


>gi|297162400|gb|ADI12112.1| hypothetical protein SBI_08994 [Streptomyces bingchenggensis BCW-1]
          Length = 1205

 Score = 39.8 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 50/288 (17%), Positives = 89/288 (30%), Gaps = 53/288 (18%)

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
            + GV   I++L  L+     K                 NL   +G  + +FI++  +  
Sbjct: 495 AVVGVIKTIKELKDLLMGILAKAASAIMKIIKDPIGFLGNLVRAVGAGLQQFISNIGTHL 554

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
              GLV    G    +  +                     ++ LI+ + G   A     +
Sbjct: 555 Q-TGLVSWLLGTSAKAGIEIPSKF------------DLKGIIQLIASLLGLTWA-NIRAR 600

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA--IVAEIGSMKINEEIDAIRTM 247
           +++ G         ++    +   +  A+   G +G+A  I AE G +K    +D +++ 
Sbjct: 601 ITRKGVPDQ-----AMSAAEQSVPVAKALATEGPAGAAKEITAETGDLKSTI-LDDLKS- 653

Query: 248 GLDFVRILISPRIWALII-SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
                  LI   I A I   L LL   + F   +   I I  +     A      ++   
Sbjct: 654 ------YLIPTVIIAGITWILSLLNPASAFVRAVKGIIDIVTFIVNQGAQIVEFVNAVLD 707

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
                            I I            S  + K V T +  SI
Sbjct: 708 ---------------AVIAI--------ANGGSAGVPKMVETALAASI 732


>gi|120600240|ref|YP_964814.1| SpoIIAA family protein [Shewanella sp. W3-18-1]
 gi|146291830|ref|YP_001182254.1| SpoIIAA family protein [Shewanella putrefaciens CN-32]
 gi|120560333|gb|ABM26260.1| SpoIIAA family protein [Shewanella sp. W3-18-1]
 gi|145563520|gb|ABP74455.1| SpoIIAA family protein [Shewanella putrefaciens CN-32]
 gi|319425065|gb|ADV53139.1| phospholipid transport-associated protein, MlaB [Shewanella
          putrefaciens 200]
          Length = 94

 Score = 39.8 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 30/81 (37%), Gaps = 4/81 (4%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
          TV    G     ++  +       ++   Q    ++ LS +   D+ G   ++  + ++ 
Sbjct: 9  TVCHLKGRLSQTQVIALWSQRHSLLSPQTQ----VLSLSGLEYSDSAGVAFLLALVSEHK 64

Query: 67 GKIKLQGVSTHIEQLFSLISF 87
            + L   S  +++L  L   
Sbjct: 65 TPLALSSASQQLKKLIDLYDL 85


>gi|296268344|ref|YP_003650976.1| anti-sigma-factor antagonist [Thermobispora bispora DSM 43833]
 gi|296091131|gb|ADG87083.1| anti-sigma-factor antagonist [Thermobispora bispora DSM 43833]
          Length = 115

 Score = 39.8 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 38/103 (36%), Gaps = 10/103 (9%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
           TV    G      + E+   V+ AI          VDL+A+  IDT G  +++  + K  
Sbjct: 15  TVLSLRGELDLYAVDELRRPVLTAIAAH--GPWLAVDLTAVNFIDTTGLGMLVRLLNKLR 72

Query: 67  ---GKIKLQGVSTHIEQLFS-----LISFTHRKKIKNQKPQRS 101
              G + L G    ++++        +           +P R+
Sbjct: 73  EKNGDLALIGPRGQVKRILQWTNLNRLFPVFDSAAAIPEPARN 115


>gi|291059916|gb|ADD72651.1| anti-sigma F factor antagonist [Treponema pallidum subsp. pallidum
           str. Chicago]
          Length = 121

 Score = 39.8 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 43/108 (39%), Gaps = 5/108 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
              GI V   +G+       ++ D V+   ++  +    ++DL A+  ID+ G  +++Y 
Sbjct: 7   QSGGICVVDISGDMDLYHSYKLKDLVLKLFDRGPRC--IVIDLEAVEYIDSSGIGVLIYL 64

Query: 62  ---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106
              ++K      + GV   ++++  L    +   I     +      S
Sbjct: 65  CSTVKKLKIHFFISGVHGSVKKVIELTRLLNYFPIAESVDEALARARS 112


>gi|170077903|ref|YP_001734541.1| anti-anti-sigma factor [Synechococcus sp. PCC 7002]
 gi|169885572|gb|ACA99285.1| anti-anti-sigma factor [Synechococcus sp. PCC 7002]
          Length = 109

 Score = 39.8 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 44/85 (51%), Gaps = 4/85 (4%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG---AELIM 59
          +N I VF   G + + +  E  DD++ +I +  + +  ++D + IT +D+ G     L++
Sbjct: 2  DNKIAVFHPTGIFDNIKSLEFKDDLLKSIIEE-KKEVVVLDFAGITFMDSAGLGSLVLLL 60

Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSL 84
            +  +  K+ L  V+  ++ LF L
Sbjct: 61 KTVRSHGAKMILCNVNEQVQMLFEL 85


>gi|271498873|ref|YP_003331898.1| anti-sigma-factor antagonist [Dickeya dadantii Ech586]
 gi|270342428|gb|ACZ75193.1| anti-sigma-factor antagonist [Dickeya dadantii Ech586]
          Length = 97

 Score = 39.5 bits (91), Expect = 0.78,   Method: Composition-based stats.
 Identities = 12/85 (14%), Positives = 30/85 (35%), Gaps = 8/85 (9%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
               G      +  +       +     + S ++D+  +  +D+ G  L+++F    E+
Sbjct: 13 TLYLEGCLDRNSLLPLWQQRDALL-----AGSRVLDVGQVERVDSAGLALLVHFYHQQEQ 67

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89
              + + G S  +  L  L +   
Sbjct: 68 QGTPMTITGASERLRTLIQLYNLNE 92


>gi|322834658|ref|YP_004214685.1| anti-sigma-factor antagonist [Rahnella sp. Y9602]
 gi|321169859|gb|ADW75558.1| anti-sigma-factor antagonist [Rahnella sp. Y9602]
          Length = 104

 Score = 39.5 bits (91), Expect = 0.79,   Method: Composition-based stats.
 Identities = 12/85 (14%), Positives = 33/85 (38%), Gaps = 8/85 (9%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          E+        G      +    D     + + + S    +D+S +  +D+ G   +++  
Sbjct: 8  ESQPPRLMLHGELDRETLVAFWD-----MRRKLMSGVTCLDVSGLERVDSSGLAFLVHLR 62

Query: 63 EKYHGK---IKLQGVSTHIEQLFSL 84
          E+   +   + + G++  +  L +L
Sbjct: 63 EEARQQGITLTIAGITDRLRTLITL 87


>gi|257440907|ref|ZP_05616662.1| anti-sigma F factor antagonist [Faecalibacterium prausnitzii
          A2-165]
 gi|257196687|gb|EEU94971.1| anti-sigma F factor antagonist [Faecalibacterium prausnitzii
          A2-165]
          Length = 104

 Score = 39.5 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 31/87 (35%), Gaps = 4/87 (4%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59
          + + +     AG         +   +  A+       + ++DL  +  +D+ G  LI+  
Sbjct: 8  AADDLLYAYLAGEIDHDAAQNLRIQLDDALLAR-TPKTLVLDLGGVGFMDSSGVGLILGR 66

Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLI 85
                  G +++Q     + ++  L 
Sbjct: 67 QRCARSLGGTLRIQHAPEQLRRVLRLA 93


>gi|296166009|ref|ZP_06848461.1| anti-sigma factor antagonist [Mycobacterium parascrofulaceum ATCC
          BAA-614]
 gi|295898630|gb|EFG78184.1| anti-sigma factor antagonist [Mycobacterium parascrofulaceum ATCC
          BAA-614]
          Length = 126

 Score = 39.5 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 9/82 (10%), Positives = 28/82 (34%), Gaps = 3/82 (3%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTI---GAELIMYFM 62
              +  G+     +  + D     + +        +DL+A+   D+    G  L+    
Sbjct: 13 TARLQVRGDLVYETVDAMVDAADRLLGQQPTPADLHLDLAALEFCDSAGLSGLLLVHRRS 72

Query: 63 EKYHGKIKLQGVSTHIEQLFSL 84
           +   ++ L      ++++  +
Sbjct: 73 HQAGARLHLDNRPRFLDRILDV 94


>gi|281209456|gb|EFA83624.1| hypothetical protein PPL_02690 [Polysphondylium pallidum PN500]
          Length = 810

 Score = 39.5 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 55/142 (38%), Gaps = 27/142 (19%)

Query: 202 LMSILQLREIGVLL--TAVMIAGRSGSAIVAEIGSMKINEEI---DAIRTMGL-DFVRIL 255
           L+    ++++G +    A+M        +V ++G + + +E+   + +  MGL D V   
Sbjct: 207 LVVEDIIKDMGPIFFFAALMF------NVVIQLGQIVLEKELKLREGMNMMGLKDSVYWF 260

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD-IPFAVFFSRFHST----ATLANI 310
                    ++  L+ +++ F  +    I  + ++    F  FF  F        T    
Sbjct: 261 TWT------VTNILVNVISCFVLVAAGYIFQFDFFKKNNFGTFFVLFLLFGISMVTFVFF 314

Query: 311 FTGLIK----APFMACAIGIVA 328
            + LIK    A  +   I ++ 
Sbjct: 315 LSTLIKRADIATSIGFVIFLIG 336


>gi|289674998|ref|ZP_06495888.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. syringae FF5]
          Length = 100

 Score = 39.5 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 6/83 (7%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MYFM 62
           T  +  G      ++E+A  ++  I  + +     VDLS +TE+D  G +L+       
Sbjct: 15 TTRVQIDGELTIYTVTELAARLLPQIGAAAR---LEVDLSQVTEMDGAGLQLLAVIQREA 71

Query: 63 EKYHGKIKLQGVSTHIEQLFSLI 85
           K    + L G S  + + F L 
Sbjct: 72 GKTGTSLHLTGQSKAVSETFELC 94


>gi|222055351|ref|YP_002537713.1| anti-sigma-factor antagonist [Geobacter sp. FRC-32]
 gi|221564640|gb|ACM20612.1| anti-sigma-factor antagonist [Geobacter sp. FRC-32]
          Length = 120

 Score = 39.5 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 25/53 (47%), Gaps = 3/53 (5%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
           V + +G      + E+   ++ A+      +   +DL+ +TE+D  G +L+ 
Sbjct: 18 LVVKVSGPLTVQNVGELKTSLLQALE---GGEQLCLDLAGVTEVDLAGLQLLC 67


>gi|308069567|ref|YP_003871172.1| Anti-sigma F factor antagonist (Stage II sporulation protein AA)
          [Paenibacillus polymyxa E681]
 gi|310642624|ref|YP_003947382.1| anti-sigma f factor antagonist [Paenibacillus polymyxa SC2]
 gi|305858846|gb|ADM70634.1| Anti-sigma F factor antagonist (Stage II sporulation protein AA)
          [Paenibacillus polymyxa E681]
 gi|309247574|gb|ADO57141.1| Anti-sigma F factor antagonist [Paenibacillus polymyxa SC2]
          Length = 117

 Score = 39.5 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 37/83 (44%), Gaps = 4/83 (4%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YF 61
          G+ + R +G         +   +  AI +  Q +  ++ L  +  +D+ G  +I+     
Sbjct: 12 GVLIVRLSGELDHHTSDMVRMQMDEAIQRR-QCEHIVLSLKNLQFMDSSGLGVILGRYKL 70

Query: 62 MEKYHGKIKLQGVSTHIEQLFSL 84
          +++  GK+ +  V+  + +L  +
Sbjct: 71 IKQKGGKMAVCDVNPPVHRLLDM 93


>gi|251791362|ref|YP_003006083.1| anti-sigma-factor antagonist [Dickeya zeae Ech1591]
 gi|247539983|gb|ACT08604.1| anti-sigma-factor antagonist [Dickeya zeae Ech1591]
          Length = 97

 Score = 39.5 bits (91), Expect = 0.88,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 31/85 (36%), Gaps = 8/85 (9%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
          +    G      +  +       +  S      ++D+  +  +D+ G  L+++F    E+
Sbjct: 13 ILFLEGCLDRNSLLPLWQQRNALLAAS-----RVLDVEQVERVDSAGLALLVHFYHQQEQ 67

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89
              +K+ G S  +  L  L +   
Sbjct: 68 QGTPMKITGASERLRTLIQLYNLNE 92


>gi|120402490|ref|YP_952319.1| anti-sigma-factor antagonist [Mycobacterium vanbaalenii PYR-1]
 gi|119955308|gb|ABM12313.1| anti-sigma-factor antagonist [Mycobacterium vanbaalenii PYR-1]
          Length = 128

 Score = 39.5 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 9/90 (10%), Positives = 32/90 (35%), Gaps = 5/90 (5%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---M 59
           +    V R  G+  +     +   + +A+  +      +VD++ +  + + G  ++    
Sbjct: 19  QGAALVLRVTGDLDAMTAPTLVTHLDIALADA--PPVVVVDMTDVEFLSSAGISVLVETH 76

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
              E+    +++        + F ++    
Sbjct: 77  RLAERADISLRVVADGPATSRPFRMMRLDE 106


>gi|167770369|ref|ZP_02442422.1| hypothetical protein ANACOL_01712 [Anaerotruncus colihominis DSM
           17241]
 gi|167667691|gb|EDS11821.1| hypothetical protein ANACOL_01712 [Anaerotruncus colihominis DSM
           17241]
          Length = 130

 Score = 39.5 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 47/109 (43%), Gaps = 6/109 (5%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60
           + +      G+       E+ + +  A+ K+ Q+ +  +D   +T +D+ G  L+M    
Sbjct: 16  DELVTAHIIGDIDHHNAREMRETIDDAVLKA-QARALELDFRDVTFMDSSGIGLVMGRYK 74

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
            M++  G +++  ++ H++++  L        +   KP+R       + 
Sbjct: 75  LMQEVGGSLRVVNIAGHLKKVMMLAGLDRLAVMD--KPERRVTAGHIEK 121


>gi|319788636|ref|YP_004148111.1| hypothetical protein Psesu_3057 [Pseudoxanthomonas suwonensis 11-1]
 gi|317467148|gb|ADV28880.1| hypothetical protein Psesu_3057 [Pseudoxanthomonas suwonensis 11-1]
          Length = 103

 Score = 39.5 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 12/99 (12%), Positives = 33/99 (33%), Gaps = 7/99 (7%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +     V    G      +  +   +     + +   +  ++L AI  +D+ G  L+   
Sbjct: 10  ARREGEVLHLEGRLDRAAVVALWPRL-----QPLVDGARTLELGAIQSLDSAGLALLAET 64

Query: 62  MEKYH--GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
             +    G +++ G +  + +L +      +       P
Sbjct: 65  AARMRASGPVQVGGDAPGLAELRAAYRLDPQLNYAGAPP 103


>gi|118465979|ref|YP_879574.1| hypothetical protein MAV_0285 [Mycobacterium avium 104]
 gi|118167266|gb|ABK68163.1| hypothetical protein MAV_0285 [Mycobacterium avium 104]
          Length = 274

 Score = 39.5 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 34/111 (30%), Gaps = 8/111 (7%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
               +    G+W +P+ + +      A        +A   L    +IDT  A L+    E
Sbjct: 89  EAACLLMLNGDWTAPQYALLRAAYESA-------GAATW-LLQPGDIDTRLARLLWQHRE 140

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI 114
            +    K  G +           +      +     R+     F+NL   I
Sbjct: 141 SWRYSTKAYGGTPLDHDREERQRWADDAAARLGIDLRAGRSGGFENLIEEI 191


>gi|220931544|ref|YP_002508452.1| anti-sigma-factor antagonist spoIIAA [Halothermothrix orenii H
          168]
 gi|219992854|gb|ACL69457.1| anti-sigma-factor antagonist spoIIAA [Halothermothrix orenii H
          168]
          Length = 120

 Score = 39.5 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 35/81 (43%), Gaps = 4/81 (4%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFME 63
           + R +G      + E  D  +  + ++      I++L  +  ID+ G   I+     ++
Sbjct: 12 LIVRLSGELDMHSVPEFKDKTIK-LMENNNLKHLILNLKGVKFIDSSGVGAILGRYRDLK 70

Query: 64 KYHGKIKLQGVSTHIEQLFSL 84
             GK+ L  +   +E++F L
Sbjct: 71 DKGGKVMLVSLKPQVEKIFEL 91


>gi|89099053|ref|ZP_01171932.1| anti-sigma F factor antagonist (stage II sporulation protein AA)
          [Bacillus sp. NRRL B-14911]
 gi|89086183|gb|EAR65305.1| anti-sigma F factor antagonist (stage II sporulation protein AA)
          [Bacillus sp. NRRL B-14911]
          Length = 116

 Score = 39.5 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 40/84 (47%), Gaps = 4/84 (4%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60
          N +   R +G        E+ +    AI  S      +++L  ++ +D+ G  +I+    
Sbjct: 11 NDVLCIRLSGELDHHSADELREKATNAIE-SYGIRHIVLNLEQLSFMDSSGLGVILGRYK 69

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSL 84
           +++ HG++ +  +S  +++LF +
Sbjct: 70 QIKQLHGEMVVCAISPAVQRLFDM 93


>gi|156741105|ref|YP_001431234.1| anti-sigma-factor antagonist [Roseiflexus castenholzii DSM 13941]
 gi|156232433|gb|ABU57216.1| anti-sigma-factor antagonist [Roseiflexus castenholzii DSM 13941]
          Length = 117

 Score = 39.5 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 34/85 (40%), Gaps = 5/85 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---M 59
          ++GIT+ R  G       +++   +   +         I DL  ++ +D+ G   +   +
Sbjct: 9  DDGITIVRMDGRLDLVTAAQVKQQLTELVAS--GHRRLIFDLDRVSFVDSSGLGALISGL 66

Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSL 84
              +  G +++   +  +  L +L
Sbjct: 67 KVARQAGGDLRIARANQQVRTLLNL 91


>gi|238918534|ref|YP_002932048.1| hypothetical protein NT01EI_0584 [Edwardsiella ictaluri 93-146]
 gi|238868102|gb|ACR67813.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 104

 Score = 39.5 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 35/92 (38%), Gaps = 6/92 (6%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME-K 64
            +    G  +   + EI       +     +  A +D+S ++ +D+ G  L+++    +
Sbjct: 13 GAILYLQGVLECDSLGEIWQQRQALL-----TGIACLDISELSRVDSAGLALLLHVQNLR 67

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96
              I L+G+S  +  L +L +          
Sbjct: 68 PEMPIPLRGISDRLRTLITLYNLQEIVPCAAP 99


>gi|238756120|ref|ZP_04617441.1| Anti-sigma B factor antagonist [Yersinia ruckeri ATCC 29473]
 gi|238705659|gb|EEP98055.1| Anti-sigma B factor antagonist [Yersinia ruckeri ATCC 29473]
          Length = 100

 Score = 39.5 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          E+        G+     +  +         +++ +D   +D++ +  +D+ G  L+++  
Sbjct: 8  ESQQHTLLLIGDLDRETLMPLWQQ-----RETLLADKTCLDVAQLQRVDSSGLALLVHLR 62

Query: 63 EKYHGK---IKLQGVSTHIEQLFSL 84
          E+ H +   + + GVS  +  L +L
Sbjct: 63 EEQHQRGSDLIISGVSDRLATLITL 87


>gi|30250305|ref|NP_842375.1| STAS domain-containing protein [Nitrosomonas europaea ATCC 19718]
 gi|30181100|emb|CAD86292.1| STAS domain [Nitrosomonas europaea ATCC 19718]
          Length = 113

 Score = 39.5 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 26 DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY---HGKIKLQGVSTHIEQLF 82
          +V+   + +I++D  ++DL+ +T +D+    +++ +M        +I+   + +++  L 
Sbjct: 36 EVIRTGDAAIKADDMLIDLAGVTWVDSSAVSMLLEWMRTAQTYDRRIEFINLPSNLADLI 95

Query: 83 SLIS 86
           L  
Sbjct: 96 ELYD 99


>gi|295696442|ref|YP_003589680.1| anti-sigma-factor antagonist [Bacillus tusciae DSM 2912]
 gi|295412044|gb|ADG06536.1| anti-sigma-factor antagonist [Bacillus tusciae DSM 2912]
          Length = 116

 Score = 39.5 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 38/85 (44%), Gaps = 4/85 (4%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
           +G+ V R  G       S+     V A+ +   S   + +LS ++ +D+ G  +++   
Sbjct: 10 RSGVVVARLRGELD-HHTSDGVRAKVDALLEETGSIRLLWNLSDLSFMDSSGLGVLLGRY 68

Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSL 84
            + +  GK+   G++  + +L  L
Sbjct: 69 RRISQRGGKMACCGLTAPVRKLLEL 93


>gi|31789384|gb|AAP58501.1| putative anti-sigma factor antagonist [uncultured Acidobacteria
          bacterium]
          Length = 118

 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 40/84 (47%), Gaps = 4/84 (4%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY--- 60
          +G+T+    G     E  E+  D + ++ +  +    +++L  +  ID+ G   I+    
Sbjct: 14 DGVTILDLKGKMTLGEGDELLKDKINSLIQQDR-KKLLLNLEGVPYIDSAGLGEIVRTYT 72

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSL 84
           + +  GK+KL  ++  I+ L ++
Sbjct: 73 TVSRQGGKLKLLNLTKRIQDLLAI 96


>gi|33151496|ref|NP_872849.1| putative anti-sigma factor B antagonist [Haemophilus ducreyi
          35000HP]
 gi|33147716|gb|AAP95238.1| putative anti-sigma factor B antagonist [Haemophilus ducreyi
          35000HP]
          Length = 113

 Score = 39.1 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 23/62 (37%), Gaps = 1/62 (1%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +NG       G      +  +       ++    +++   DL+ +  ID+ G  L++  
Sbjct: 13 EQNGSLFVTLLGELTRDTLLPLWKQRASFLSNP-HNETIYWDLNHLLRIDSAGFALLIEL 71

Query: 62 ME 63
          + 
Sbjct: 72 LN 73


>gi|71734111|ref|YP_273088.1| STAS domain-containing protein [Pseudomonas syringae pv.
          phaseolicola 1448A]
 gi|289626912|ref|ZP_06459866.1| STAS domain-containing protein [Pseudomonas syringae pv. aesculi
          str. NCPPB3681]
 gi|71554664|gb|AAZ33875.1| STAS domain protein [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|330867350|gb|EGH02059.1| STAS domain-containing protein [Pseudomonas syringae pv. aesculi
          str. 0893_23]
 gi|330987695|gb|EGH85798.1| STAS domain-containing protein [Pseudomonas syringae pv.
          lachrymans str. M301315]
 gi|331013008|gb|EGH93064.1| STAS domain-containing protein [Pseudomonas syringae pv. tabaci
          ATCC 11528]
          Length = 96

 Score = 39.1 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 6/87 (6%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--- 58
          ++   T  +  G      ++E+A  ++  I  + +     VDLS +TE+D  G +L+   
Sbjct: 7  NQADATRVQIDGELTIYTVTELAARLLPQITGAAR---VEVDLSQVTEMDGAGLQLLAVI 63

Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLI 85
               K    +++ G S  + + F L 
Sbjct: 64 QREAGKTGTSLRMTGQSKAVTETFELC 90


>gi|115372701|ref|ZP_01460007.1| stas domain, putative [Stigmatella aurantiaca DW4/3-1]
 gi|310823497|ref|YP_003955855.1| anti-sigma factor antagonist [Stigmatella aurantiaca DW4/3-1]
 gi|115370182|gb|EAU69111.1| stas domain, putative [Stigmatella aurantiaca DW4/3-1]
 gi|309396569|gb|ADO74028.1| anti-sigma factor antagonist [Stigmatella aurantiaca DW4/3-1]
          Length = 127

 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 36/86 (41%), Gaps = 5/86 (5%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME-- 63
           +      G     ++  + +++   + + ++   A+VD S +  +D  G + ++   E  
Sbjct: 20  VETLCLEGELSEQDLHGVCEELFRRLQRGLR--QAVVDFSEVAHMDYRGVKGLVARAEGF 77

Query: 64  -KYHGKIKLQGVSTHIEQLFSLISFT 88
            +  G IKL G+S ++  +       
Sbjct: 78  RRAGGDIKLSGLSPYLAAILRAAGAH 103


>gi|54293820|ref|YP_126235.1| hypothetical protein lpl0876 [Legionella pneumophila str. Lens]
 gi|53753652|emb|CAH15110.1| hypothetical protein lpl0876 [Legionella pneumophila str. Lens]
          Length = 93

 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 32/78 (41%), Gaps = 4/78 (5%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEKY 65
          F+  G      +  + D +  A+ +  +     +DLS +T  D+ G  LI+      ++ 
Sbjct: 6  FKPGGELTFKSVVSVRDKLYKALMEDTRERFC-LDLSDVTHCDSAGLALIIEARKLCKQN 64

Query: 66 HGKIKLQGVSTHIEQLFS 83
          +    + G+S   + L  
Sbjct: 65 NKVFDVIGISPETQSLAE 82


>gi|257483989|ref|ZP_05638030.1| STAS domain-containing protein [Pseudomonas syringae pv. tabaci
          ATCC 11528]
 gi|289650982|ref|ZP_06482325.1| STAS domain-containing protein [Pseudomonas syringae pv. aesculi
          str. 2250]
 gi|330890723|gb|EGH23384.1| STAS domain-containing protein [Pseudomonas syringae pv. mori
          str. 301020]
          Length = 100

 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 6/87 (6%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--- 58
          ++   T  +  G      ++E+A  ++  I  + +     VDLS +TE+D  G +L+   
Sbjct: 11 NQADATRVQIDGELTIYTVTELAARLLPQITGAAR---VEVDLSQVTEMDGAGLQLLAVI 67

Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLI 85
               K    +++ G S  + + F L 
Sbjct: 68 QREAGKTGTSLRMTGQSKAVTETFELC 94


>gi|257051283|ref|YP_003129116.1| putative PAS/PAC sensor protein [Halorhabdus utahensis DSM 12940]
 gi|256690046|gb|ACV10383.1| putative PAS/PAC sensor protein [Halorhabdus utahensis DSM 12940]
          Length = 255

 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 41/82 (50%), Gaps = 4/82 (4%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G+ +    G+  + +   + ++++  I ++ ++  A++D++ +  IDT  A+ ++  + 
Sbjct: 143 DGVILTTVVGSLDTAKAERLTEELLDRIVEA-EASVALIDITGVAAIDTATAQHLIDTIN 201

Query: 64  K---YHGKIKLQGVSTHIEQLF 82
                  ++ + G+S  I Q  
Sbjct: 202 AVNLLGARVVITGISPDIAQTL 223


>gi|317123693|ref|YP_004097805.1| anti-sigma-factor antagonist [Intrasporangium calvum DSM 43043]
 gi|315587781|gb|ADU47078.1| anti-sigma-factor antagonist [Intrasporangium calvum DSM 43043]
          Length = 127

 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 11/89 (12%)

Query: 2  SENGITVFRFAGN---WKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI 58
               TV    G    + +P + E  D+ + A    +     IVDLS +T +D+ G  ++
Sbjct: 9  DHGDRTVVHLGGEIDVYTAPFVREKLDEQIHAGRADL-----IVDLSEVTFLDSTGLGVL 63

Query: 59 ---MYFMEKYHGKIKLQGVSTHIEQLFSL 84
             + F     G +KL G S  + ++F++
Sbjct: 64 VGRLKFARTRGGSLKLVGTSERVLRVFAI 92


>gi|261405988|ref|YP_003242229.1| anti-sigma-factor antagonist [Paenibacillus sp. Y412MC10]
 gi|329929790|ref|ZP_08283466.1| anti-sigma F factor antagonist [Paenibacillus sp. HGF5]
 gi|261282451|gb|ACX64422.1| anti-sigma-factor antagonist [Paenibacillus sp. Y412MC10]
 gi|328935768|gb|EGG32229.1| anti-sigma F factor antagonist [Paenibacillus sp. HGF5]
          Length = 117

 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 37/82 (45%), Gaps = 4/82 (4%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62
          + + R +G         +   +  AI +  Q++  ++ L  +  +D+ G  +I+    F+
Sbjct: 13 VLIVRLSGELDHHTADHVRMQLDEAIQRR-QTEHLVLSLKDLDFMDSSGLGVILGRYKFI 71

Query: 63 EKYHGKIKLQGVSTHIEQLFSL 84
          ++  GK+ +  V   + +L  +
Sbjct: 72 KQKGGKMAVCDVKPQVYRLLDM 93


>gi|261401683|ref|ZP_05987808.1| conserved hypothetical protein [Neisseria lactamica ATCC 23970]
 gi|269208209|gb|EEZ74664.1| conserved hypothetical protein [Neisseria lactamica ATCC 23970]
          Length = 92

 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 26/80 (32%), Gaps = 4/80 (5%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFMEKYH 66
          +    G+     ++    +      +  +    I VD   +   D+    L++  + +  
Sbjct: 9  ILHIGGDITVKTLT---GEAFERFRQQCRLKETIAVDFGGVKRADSACVSLLLEILRRRK 65

Query: 67 GKIKLQGVSTHIEQLFSLIS 86
            I L G+   +  L  L  
Sbjct: 66 DSIGLTGIPESVRALSELYE 85


>gi|302867451|ref|YP_003836088.1| sulfate transporter/antisigma-factor antagonist STAS
           [Micromonospora aurantiaca ATCC 27029]
 gi|315506139|ref|YP_004085026.1| sulfate transporter/antisigma-factor antagonist stas
           [Micromonospora sp. L5]
 gi|302570310|gb|ADL46512.1| Sulfate transporter/antisigma-factor antagonist STAS
           [Micromonospora aurantiaca ATCC 27029]
 gi|315412758|gb|ADU10875.1| Sulfate transporter/antisigma-factor antagonist STAS
           [Micromonospora sp. L5]
          Length = 188

 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 17  SPEISEIADDVVMAI-NKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK 70
           +    + A  V  A+  +S++ D  +VDLS +  ID+ G  L++   +      +
Sbjct: 82  AAHDLDPATAVRRALDERSLRDDMELVDLSGLEVIDSAGLSLLVRAHQDARRDGR 136


>gi|271964584|ref|YP_003338780.1| anti-anti-sigma regulatory factor-like protein [Streptosporangium
          roseum DSM 43021]
 gi|270507759|gb|ACZ86037.1| Anti-anti-sigma regulatory factor (antagonist of anti-sigma
          factor)-like protein [Streptosporangium roseum DSM
          43021]
          Length = 126

 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +G+++   AG         +   +  A   S      IVD+  ++  D++G   ++  +
Sbjct: 18 RDGVSIIHVAGELDLATAPTLRRHLRAATLPSA-PPVLIVDVREVSFCDSVGLSELVLAL 76

Query: 63 EK 64
           +
Sbjct: 77 HR 78


>gi|271962372|ref|YP_003336568.1| anti-anti-sigma regulatory factor-like protein [Streptosporangium
           roseum DSM 43021]
 gi|270505547|gb|ACZ83825.1| Anti-anti-sigma regulatory factor (antagonist of anti-sigma
           factor)-like protein [Streptosporangium roseum DSM
           43021]
          Length = 121

 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 37/87 (42%), Gaps = 4/87 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMA-INKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           S  G  V R  G            ++  A  + + +S + ++DL+ +T  D+ G   +++
Sbjct: 15  SHGGAIVVRAVGELDYDYAPTFRRELTQAWTSGTGESPTLVLDLTGLTFCDSTGLAELLW 74

Query: 61  FMEK---YHGKIKLQGVSTHIEQLFSL 84
            + +      ++ L GVS  +  + + 
Sbjct: 75  MLRRSQESGTRLVLAGVSRTLRHMLTT 101


>gi|225019369|ref|ZP_03708561.1| hypothetical protein CLOSTMETH_03322 [Clostridium methylpentosum
          DSM 5476]
 gi|224948000|gb|EEG29209.1| hypothetical protein CLOSTMETH_03322 [Clostridium methylpentosum
          DSM 5476]
          Length = 112

 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 37/89 (41%), Gaps = 4/89 (4%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60
          +G+      G       ++   + +  + +S      I+D + +T +D+ G  L+M    
Sbjct: 9  DGVLTAYIMGE-IDHHTAKDIREEIDHVAESALPTLLILDFTDVTFMDSSGIGLVMGRYK 67

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
           M++  G+ ++   S HI ++  L     
Sbjct: 68 LMKEIGGETRVTNPSPHINKVMRLAGLDR 96


>gi|213857282|ref|ZP_03384253.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Typhi str. M223]
          Length = 84

 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 8/77 (10%)

Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEKYHG 67
           AG      ++ + D  V A+N         +DLS I+ +DT G  L+ +     +K   
Sbjct: 2  LAGELDQDVLAPLWDARVEAMN-----GVTRIDLSQISRVDTGGLALLAHLVNQAKKQGN 56

Query: 68 KIKLQGVSTHIEQLFSL 84
           + L GV+  +  L  L
Sbjct: 57 AVSLSGVNDKVYALAQL 73


>gi|269125130|ref|YP_003298500.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183]
 gi|268310088|gb|ACY96462.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183]
          Length = 120

 Score = 39.1 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 42/89 (47%), Gaps = 5/89 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
          +NG+ + + +G         + + ++  I+K       +VDLS +T +D+ G  +++   
Sbjct: 10 DNGVNIVKVSGEIDVFSSPRLREMLLDVIDK--GPLRLVVDLSDVTFLDSTGLGVLVGIY 67

Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFT 88
          + +   +G +   G +  + ++F +   T
Sbjct: 68 HRLRARNGSMSFVGANDRVRRVFHITQLT 96


>gi|146313261|ref|YP_001178335.1| STAS domain-containing protein [Enterobacter sp. 638]
 gi|145320137|gb|ABP62284.1| putative STAS domain [Enterobacter sp. 638]
          Length = 97

 Score = 39.1 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 8/80 (10%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EK 64
              +G      +  + D    A+         ++DL ++T +DT G  L+++ +   +K
Sbjct: 13 TLFLSGELDQDLLIPLWDSREFAMQ-----GVTLIDLHSVTRVDTAGVALLVHLVAEGKK 67

Query: 65 YHGKIKLQGVSTHIEQLFSL 84
              +KL GVS ++  L  L
Sbjct: 68 QGAAVKLAGVSENVLTLAKL 87


>gi|27365950|ref|NP_761478.1| Anti-anti-sigma regulatory factor [Vibrio vulnificus CMCP6]
 gi|37679817|ref|NP_934426.1| anti-anti-sigma regulatory factor [Vibrio vulnificus YJ016]
 gi|320156463|ref|YP_004188842.1| anti anti-sigma regulatory factor SypA [Vibrio vulnificus MO6-24/O]
 gi|27362099|gb|AAO11005.1| Anti-anti-sigma regulatory factor [Vibrio vulnificus CMCP6]
 gi|37198562|dbj|BAC94397.1| anti-anti-sigma regulatory factor [Vibrio vulnificus YJ016]
 gi|319931775|gb|ADV86639.1| anti anti-sigma regulatory factor SypA [Vibrio vulnificus MO6-24/O]
          Length = 106

 Score = 39.1 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 39/97 (40%), Gaps = 4/97 (4%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
                    GN+ +   S  A   +  +  + +     VD+S +  +D+ G   I+Y  +
Sbjct: 10  QQTLTLSIVGNFDA-HGSRQAQIHIDELINNDRHTDIEVDMSGVEFLDSSGIGAIVYLYK 68

Query: 64  KY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97
           +       ++++ V     ++ SL+   H   + +++
Sbjct: 69  RLVERERTMRIENVRGQPLEIISLLRIDHAIPVNSKQ 105


>gi|325916555|ref|ZP_08178821.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma
          factor) [Xanthomonas vesicatoria ATCC 35937]
 gi|325537228|gb|EGD08958.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma
          factor) [Xanthomonas vesicatoria ATCC 35937]
          Length = 109

 Score = 39.1 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 31/81 (38%), Gaps = 3/81 (3%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
                G       +E+   +  A+          +DL+A++EIDT G +L++   +   
Sbjct: 12 LTLALEGEMTIRRAAELKPLLQPALA---HPGGLHLDLAAVSEIDTTGLQLLLATKQAIQ 68

Query: 67 GKIKLQGVSTHIEQLFSLISF 87
             +   ++     +F +I  
Sbjct: 69 ADGRPFSLTDSSRAVFDVIEL 89


>gi|256377805|ref|YP_003101465.1| PAS/PAC sensor protein [Actinosynnema mirum DSM 43827]
 gi|255922108|gb|ACU37619.1| putative PAS/PAC sensor protein [Actinosynnema mirum DSM 43827]
          Length = 1017

 Score = 39.1 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 8/61 (13%), Positives = 24/61 (39%), Gaps = 1/61 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
            + + V    G+     +  + + ++  ++         +DLS +  + + G  L++   
Sbjct: 913 RDAVQVLHLGGDLDLDGVRALREFLLGRVD-VADRRPVELDLSGLGYLSSSGVALLLEAA 971

Query: 63  E 63
           E
Sbjct: 972 E 972


>gi|88811863|ref|ZP_01127116.1| STAS domain protein [Nitrococcus mobilis Nb-231]
 gi|88790747|gb|EAR21861.1| STAS domain protein [Nitrococcus mobilis Nb-231]
          Length = 119

 Score = 39.1 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 31/92 (33%), Gaps = 3/92 (3%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          S +        G      +  ++ ++        Q     VDL+ +  +D+ G  L++ +
Sbjct: 8  SRDEEGRLALLGELTFETVPGLSKELDSMFK---QGPRLCVDLAGLERVDSAGLALLIEW 64

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
                           +QL +L   +  +++
Sbjct: 65 ARLTRTSGHALEFINTPQQLLTLARLSGVEQM 96


>gi|260596179|ref|YP_003208750.1| hypothetical protein CTU_03870 [Cronobacter turicensis z3032]
 gi|260215356|emb|CBA27356.1| Uncharacterized protein yrbB [Cronobacter turicensis z3032]
          Length = 100

 Score = 39.1 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 35/85 (41%), Gaps = 8/85 (9%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          E      R  G      +  + +       +S+      +DLS +  +DT G  L+++ +
Sbjct: 8  ERQGAQLRLNGTLDRETLLPLWEQ-----RQSLTDGLQRIDLSGLARVDTAGLALLVHLV 62

Query: 63 ---EKYHGKIKLQGVSTHIEQLFSL 84
             +     +KL+G+S ++  L  L
Sbjct: 63 ALTQAGGRGVKLEGMSENLTTLAKL 87


>gi|213970197|ref|ZP_03398328.1| STAS domain protein [Pseudomonas syringae pv. tomato T1]
 gi|302060004|ref|ZP_07251545.1| STAS domain protein [Pseudomonas syringae pv. tomato K40]
 gi|302130894|ref|ZP_07256884.1| STAS domain protein [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213925078|gb|EEB58642.1| STAS domain protein [Pseudomonas syringae pv. tomato T1]
          Length = 96

 Score = 39.1 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 6/86 (6%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---M 59
           + I   +  G      ++E+A  ++  I  + +     VDLS +TE+D  G +L+    
Sbjct: 8  RDDIAHMQIDGELTIYTVTELAARLLPQIAGAAR---VEVDLSHVTEMDGAGLQLLAVIQ 64

Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLI 85
              K    + L G S  + + F L 
Sbjct: 65 REAGKTGTALHLTGQSQAVTETFELC 90


>gi|302392457|ref|YP_003828277.1| anti-sigma-factor antagonist [Acetohalobium arabaticum DSM 5501]
 gi|302204534|gb|ADL13212.1| anti-sigma-factor antagonist [Acetohalobium arabaticum DSM 5501]
          Length = 112

 Score = 39.1 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 36/81 (44%), Gaps = 3/81 (3%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFME 63
           + R  G+     +  +   +   +   +   + I++L  +  ID+ G   I+     + 
Sbjct: 12 LIVRIDGSLDLHTVDTLRKRIDEKLTGEVGIQNMILNLKNVDFIDSSGLGFIIGRYKQIN 71

Query: 64 KYHGKIKLQGVSTHIEQLFSL 84
           + GK+K+  V+  I+Q+F L
Sbjct: 72 NHGGKLKIINVNNSIKQVFEL 92


>gi|302189174|ref|ZP_07265847.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. syringae 642]
 gi|330943041|gb|EGH45484.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. pisi str. 1704B]
          Length = 96

 Score = 39.1 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 8/89 (8%)

Query: 2  SENGITVFRFA--GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI- 58
           EN     R    G      ++E+A  ++  I  + +     VDLS +TE+D  G +L+ 
Sbjct: 5  DENATDTARVQIDGELTIYTVTELAARLLPQIGAAAR---LEVDLSQVTEMDGAGLQLLA 61

Query: 59 --MYFMEKYHGKIKLQGVSTHIEQLFSLI 85
                 K    + L G S  + + F L 
Sbjct: 62 VIQREAGKTGTSLHLTGQSKAVSETFELC 90


>gi|324502188|gb|ADY40965.1| Anoctamin-4 [Ascaris suum]
          Length = 1065

 Score = 39.1 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 57/142 (40%), Gaps = 8/142 (5%)

Query: 52  TIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLH 111
           +IGA L +   ++YH ++  +      E     +   ++ ++K  + +R          +
Sbjct: 441 SIGATLFLEGWKRYHAELAWKWGLLDFEVDEETVRPEYQLRVKEARTKRLNPITQEMEPY 500

Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171
               ++I++F   S +    L LV++    F      ++  LL ++ ++  +        
Sbjct: 501 MPFRQRILRFFASSITVLFFLLLVMA----FVVGVVVYRIVLLQVLYRVDGMKQYA---- 552

Query: 172 ILISFVTGAVIAQQGAFQLSQF 193
            +++F T A +       LS F
Sbjct: 553 SILTFTTAATLNLIVILILSYF 574


>gi|324502372|gb|ADY41044.1| Anoctamin-4 [Ascaris suum]
          Length = 1048

 Score = 39.1 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 57/142 (40%), Gaps = 8/142 (5%)

Query: 52  TIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLH 111
           +IGA L +   ++YH ++  +      E     +   ++ ++K  + +R          +
Sbjct: 441 SIGATLFLEGWKRYHAELAWKWGLLDFEVDEETVRPEYQLRVKEARTKRLNPITQEMEPY 500

Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171
               ++I++F   S +    L LV++    F      ++  LL ++ ++  +        
Sbjct: 501 MPFRQRILRFFASSITVLFFLLLVMA----FVVGVVVYRIVLLQVLYRVDGMKQYA---- 552

Query: 172 ILISFVTGAVIAQQGAFQLSQF 193
            +++F T A +       LS F
Sbjct: 553 SILTFTTAATLNLIVILILSYF 574


>gi|330900452|gb|EGH31871.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. japonica str. M301072PT]
 gi|330977435|gb|EGH77382.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. aptata str. DSM 50252]
          Length = 100

 Score = 39.1 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 8/89 (8%)

Query: 2  SENGITVFRFA--GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI- 58
           EN     R    G      ++E+A  ++  I  + +     VDLS +TE+D  G +L+ 
Sbjct: 9  DENATDTARVQIDGELTIYTVTELAARLLPQIGAAAR---LEVDLSQVTEMDGAGLQLLA 65

Query: 59 --MYFMEKYHGKIKLQGVSTHIEQLFSLI 85
                 K    + L G S  + + F L 
Sbjct: 66 VIQREAGKTGTSLHLTGQSKAVSETFELC 94


>gi|3287905|sp|O32720|SP2AA_PAEPO RecName: Full=Anti-sigma F factor antagonist; AltName: Full=Stage
          II sporulation protein AA
 gi|2529265|gb|AAB81184.1| spoIIAA gene product [Paenibacillus polymyxa]
          Length = 117

 Score = 39.1 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 36/83 (43%), Gaps = 4/83 (4%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YF 61
          G+ + R +G         +   +  AI +  Q +  ++ L  +  +D+ G  +I+     
Sbjct: 12 GVLIVRLSGELDHHTSDMVRMQMDEAIQRR-QCEHIVLSLKNLQFMDSSGLGVILGRYKL 70

Query: 62 MEKYHGKIKLQGVSTHIEQLFSL 84
          + +  G++ +  V+  + +L  +
Sbjct: 71 INQKGGEMAVCDVNPPVHRLLDM 93


>gi|194100079|ref|YP_002003219.1| hypothetical protein NGK_2594 [Neisseria gonorrhoeae NCCP11945]
 gi|239998071|ref|ZP_04717995.1| hypothetical protein Ngon3_01103 [Neisseria gonorrhoeae 35/02]
 gi|240116990|ref|ZP_04731052.1| hypothetical protein NgonPID_00768 [Neisseria gonorrhoeae PID1]
 gi|240122628|ref|ZP_04735584.1| hypothetical protein NgonP_01551 [Neisseria gonorrhoeae PID332]
 gi|268593923|ref|ZP_06128090.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268602674|ref|ZP_06136841.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
 gi|268681224|ref|ZP_06148086.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|193935369|gb|ACF31193.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945]
 gi|268547312|gb|EEZ42730.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268586805|gb|EEZ51481.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
 gi|268621508|gb|EEZ53908.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
          Length = 92

 Score = 39.1 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 26/80 (32%), Gaps = 4/80 (5%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFMEKYH 66
               G+     ++    D      +  +    I VD   +   D+    L++  +    
Sbjct: 9  TLHIGGDITVKTLT---GDAFGRFRQQCRLKETIAVDFGGVKRADSACVSLLLEVLRGCK 65

Query: 67 GKIKLQGVSTHIEQLFSLIS 86
          G ++L G+   +  L  L  
Sbjct: 66 GSVRLTGIPESVRALSELYE 85


>gi|30019157|ref|NP_830788.1| anti-sigma B factor antagonist [Bacillus cereus ATCC 14579]
 gi|229126410|ref|ZP_04255425.1| Anti-sigma factor antagonist [Bacillus cereus BDRD-Cer4]
 gi|29894700|gb|AAP07989.1| Anti-sigma B factor antagonist [Bacillus cereus ATCC 14579]
 gi|228656990|gb|EEL12813.1| Anti-sigma factor antagonist [Bacillus cereus BDRD-Cer4]
          Length = 112

 Score = 39.1 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 44/93 (47%), Gaps = 7/93 (7%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVV-MAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
          +  +G    +  G   +   S++ + ++ +A  K +Q    +VD   +  +D+ G  + +
Sbjct: 9  LQNDGGYTVQLNGEIDAYTASDLKNKIMPIASEKEVQ---IVVDFHNVDYMDSTGLGVFI 65

Query: 60 YFM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89
            +   +K  GK++  GVS  +++LF +   T 
Sbjct: 66 ALLKAVKKNDGKLEFIGVSKRLKRLFDITGLTE 98


>gi|261253023|ref|ZP_05945596.1| anti-anti-sigma regulatory factor [Vibrio orientalis CIP 102891]
 gi|260936414|gb|EEX92403.1| anti-anti-sigma regulatory factor [Vibrio orientalis CIP 102891]
          Length = 106

 Score = 39.1 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 37/98 (37%), Gaps = 4/98 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           + + IT     GN  +   S  A   +  I          +D S +  +D+ G   I+Y 
Sbjct: 8   ANDTITTLIINGNLDADG-SRFAQPHIDEIIADNTQRDIEIDFSQVQFLDSSGVGAIVYL 66

Query: 62  MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96
            ++       ++++ VS    ++ +L+       + + 
Sbjct: 67  YKRLVERQRNMRIENVSGQPLEIINLLRIDQAIPVNSH 104


>gi|319638898|ref|ZP_07993656.1| hypothetical protein HMPREF0604_01280 [Neisseria mucosa C102]
 gi|317399802|gb|EFV80465.1| hypothetical protein HMPREF0604_01280 [Neisseria mucosa C102]
          Length = 105

 Score = 39.1 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 30/79 (37%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              +G+     ++  A        +  ++DS  +D S + + D+    L++  + +   
Sbjct: 22 TLYISGDVTVKTLTASAFARYEQQCRLKETDS--IDFSQVGKADSACVSLLLNALRRTDK 79

Query: 68 KIKLQGVSTHIEQLFSLIS 86
          K  +Q +   +  L  L  
Sbjct: 80 KPTIQNIPDSVRALAELYE 98


>gi|284799476|ref|ZP_05984072.2| conserved hypothetical protein [Neisseria subflava NJ9703]
 gi|284797962|gb|EFC53309.1| conserved hypothetical protein [Neisseria subflava NJ9703]
          Length = 105

 Score = 39.1 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 30/79 (37%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              +G+     ++  A        +  ++DS  +D S + + D+    L++  + +   
Sbjct: 22 TLYISGDVTVKTLTASAFARYEQQCRLKETDS--IDFSQVGKADSACVSLLLNALRRTDK 79

Query: 68 KIKLQGVSTHIEQLFSLIS 86
          K  +Q +   +  L  L  
Sbjct: 80 KPTIQNIPDSVRALAELYE 98


>gi|225077103|ref|ZP_03720302.1| hypothetical protein NEIFLAOT_02156 [Neisseria flavescens
          NRL30031/H210]
 gi|224951660|gb|EEG32869.1| hypothetical protein NEIFLAOT_02156 [Neisseria flavescens
          NRL30031/H210]
          Length = 105

 Score = 39.1 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 30/79 (37%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              +G+     ++  A        +  ++DS  +D S + + D+    L++  + +   
Sbjct: 22 TLYISGDVTVKTLTASAFARYEQQCRLKETDS--IDFSQVGKADSACVSLLLNALRRTDK 79

Query: 68 KIKLQGVSTHIEQLFSLIS 86
          K  +Q +   +  L  L  
Sbjct: 80 KPTIQNIPDSVRALAELYE 98


>gi|308070733|ref|YP_003872338.1| Anti-sigma F factor antagonist (Stage II sporulation protein AA)
          [Paenibacillus polymyxa E681]
 gi|305860012|gb|ADM71800.1| Anti-sigma F factor antagonist (Stage II sporulation protein AA)
          [Paenibacillus polymyxa E681]
          Length = 112

 Score = 39.1 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 38/86 (44%), Gaps = 5/86 (5%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          + +G+     +G      ++     V+  +     S   I++L  +  ID+ G  +++  
Sbjct: 15 TTDGVNTVYLSGELDL-SVAPDFRLVMEPLVGE-SSQDLIINLRDLKYIDSTGIGILLSI 72

Query: 62 MEKYHG---KIKLQGVSTHIEQLFSL 84
          ++  HG   +  +Q +   I++LF +
Sbjct: 73 LKARHGMESRFAVQEIPPQIQKLFDM 98


>gi|59714203|ref|YP_206978.1| putative sulphate transporter, anti-sigma factor antagonist [Vibrio
           fischeri ES114]
 gi|59482451|gb|AAW88090.1| putative sulphate transporter, anti-sigma factor antagonist [Vibrio
           fischeri ES114]
          Length = 105

 Score = 39.1 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 36/95 (37%), Gaps = 5/95 (5%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S   I V    G+  +    +I   +   I +  +     +DLS +  +D+ G   I+Y 
Sbjct: 8   SNEDILVLSVQGDMDAIGCRDIQPSIDSVIEQ--EHHQVQIDLSHVAFLDSSGIGAIVYL 65

Query: 62  MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKI 93
            ++       ++++       +L  L+   +   +
Sbjct: 66  YKRLIEKDRTMQIKNAHGQPLELLKLLRIENAIPV 100


>gi|145595097|ref|YP_001159394.1| Sulfate transporter/antisigma-factor antagonist STAS [Salinispora
           tropica CNB-440]
 gi|145304434|gb|ABP55016.1| Sulfate transporter/antisigma-factor antagonist STAS [Salinispora
           tropica CNB-440]
          Length = 176

 Score = 38.7 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 19  EISEIADDVVMAINKSIQS-DSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
             +   D +  A++++I+     +VDLSA+ +ID++G  L++   ++   +
Sbjct: 83  ATAATPDPLRTALDEAIEHEGRVVVDLSAVEQIDSVGLGLLVRARQEARQR 133


>gi|153871244|ref|ZP_02000467.1| anti-sigma-factor antagonist [Beggiatoa sp. PS]
 gi|152072289|gb|EDN69532.1| anti-sigma-factor antagonist [Beggiatoa sp. PS]
          Length = 111

 Score = 38.7 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 25/63 (39%), Gaps = 7/63 (11%)

Query: 10 RFAGNWKSPEISEIADD-------VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          R +G      + E+  +       +     K IQ    ++DLS +T  D+ G   ++   
Sbjct: 15 RLSGELTFTTVGELLSEFTEKMSLLDNGGAKKIQPAPQVMDLSDVTRTDSAGLAFLIELQ 74

Query: 63 EKY 65
          ++ 
Sbjct: 75 KQT 77


>gi|166367962|ref|YP_001660235.1| metal dependent phosphohydrolase HD region [Microcystis aeruginosa
           NIES-843]
 gi|166090335|dbj|BAG05043.1| metal dependent phosphohydrolase HD region [Microcystis aeruginosa
           NIES-843]
          Length = 782

 Score = 38.7 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 80/257 (31%), Gaps = 10/257 (3%)

Query: 57  LIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116
           L+     + +     +       +    +          Q   ++    +        G 
Sbjct: 285 LLAALEGEANLIEDREATKEQATKAVEAVDTVMSSAQTGQIIVKAGEKITQAQFVLIDGF 344

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV--PVVIL- 173
            + +   +         LV S  G FC  + +    L    R    +G+     P++ + 
Sbjct: 345 GLSERGINWMGLGSTAILVTSAIGTFCLVAQRLHRPLRH--RDFILLGLLSFTTPILAIA 402

Query: 174 -ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
            I F   A +    +       A    +    +      G  ++A +IAG  G  + A I
Sbjct: 403 NIPFTNLAAVGLLVSSFYGPTLAVTQVLLTAGLSLFSSQG--ISADLIAGTIGGLLAAMI 460

Query: 233 -GSMKINEEIDAIRT-MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
            G ++  +E+  +   +G+    + +   +     +  ++  L   + + G S + W   
Sbjct: 461 AGKLRSRDELSLLGMGIGVSQGGVYLLTYLIVSATASTIIYTLLPTALVYGLSGIAWTVI 520

Query: 291 DIPFAVFFSRFHSTATL 307
            +  + +  R     T 
Sbjct: 521 ALGLSPYLERCFDVVTP 537


>gi|167520576|ref|XP_001744627.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776958|gb|EDQ90576.1| predicted protein [Monosiga brevicollis MX1]
          Length = 913

 Score = 38.7 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 19/53 (35%)

Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           +      I   A        +   ++   +T+ VV +   +I+ D LF+    
Sbjct: 859 SLTFTAIIMGCAEWRARRPSLQPRNVASAITSAVVSAGVAIIVADGLFSQIML 911


>gi|296133161|ref|YP_003640408.1| anti-sigma-factor antagonist [Thermincola sp. JR]
 gi|296031739|gb|ADG82507.1| anti-sigma-factor antagonist [Thermincola potens JR]
          Length = 111

 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 37/82 (45%), Gaps = 4/82 (4%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62
          + + +  G++       I   +   +++ +   + ++DLS +  ID+ G  +I+     +
Sbjct: 11 VLLVKLTGDFDMAVADNIRCHIDKQLDEGL-VKNVVLDLSDVGFIDSSGLGVILGRYKRI 69

Query: 63 EKYHGKIKLQGVSTHIEQLFSL 84
           +  GK+ + G    + ++  L
Sbjct: 70 SQLGGKMAIIGAQPQVNRILEL 91


>gi|257094987|ref|YP_003168628.1| anti-sigma-factor antagonist [Candidatus Accumulibacter
          phosphatis clade IIA str. UW-1]
 gi|257047511|gb|ACV36699.1| anti-sigma-factor antagonist [Candidatus Accumulibacter
          phosphatis clade IIA str. UW-1]
          Length = 101

 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 3/73 (4%)

Query: 19 EISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY---HGKIKLQGVS 75
           I +        +     +D   +DLS + E+DT G +L+M    +      ++ + G S
Sbjct: 16 TIYQAQAQKEQLLAALAAADHLELDLSGVAEMDTAGLQLLMLLKREVLQQGKRLTISGHS 75

Query: 76 THIEQLFSLISFT 88
            ++Q+    +  
Sbjct: 76 PAVQQILDFCNLV 88


>gi|296130453|ref|YP_003637703.1| anti-sigma-factor antagonist [Cellulomonas flavigena DSM 20109]
 gi|296022268|gb|ADG75504.1| anti-sigma-factor antagonist [Cellulomonas flavigena DSM 20109]
          Length = 111

 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 32/87 (36%), Gaps = 5/87 (5%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI-- 58
          + + G  V R  G       +++   V  A++        +VDL+ +  +D+ G   +  
Sbjct: 7  LRDPGAAVLRVTGRLTMLGAAQLRTTVDRAVD--TGHPLVVVDLAEVPFMDSSGLGALVG 64

Query: 59 -MYFMEKYHGKIKLQGVSTHIEQLFSL 84
           +       G +++      +  +  L
Sbjct: 65 GLRAARAASGDLRIAAPCEQVRTVLEL 91


>gi|328880418|emb|CCA53657.1| anti-sigma F factor antagonist (spoIIAA-2); anti sigma b factor
          antagonist RsbV [Streptomyces venezuelae ATCC 10712]
          Length = 122

 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 33/82 (40%), Gaps = 5/82 (6%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
            V   AG         +AD +   + +       ++DLSA+  +D+ G  +++  + + 
Sbjct: 19 TAVLSVAGELDMDTAGRLADHLAEQLGE--GRHHLVLDLSALGFMDSSGLNVLIRSVHRA 76

Query: 66 H---GKIKLQGVSTHIEQLFSL 84
              G + L   +  + ++  +
Sbjct: 77 REAGGDLYLAAPNPAVRRILEI 98


>gi|148270482|ref|YP_001244942.1| anti-sigma-factor antagonist [Thermotoga petrophila RKU-1]
 gi|147736026|gb|ABQ47366.1| anti-sigma-factor antagonist [Thermotoga petrophila RKU-1]
          Length = 110

 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          + ++   + R  G   +   SE+ + +   I+ + +    ++DLS+++ +D+ G   ++ 
Sbjct: 9  VEQDDKAIVRVQGEIDAYNSSELKEQLRSFISTTSK-KKIVLDLSSVSYMDSAGLGTLVV 67

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
           ++      K   +S+  E +  +   TH
Sbjct: 68 ILKDAKINGKEFILSSLKESILRIFKLTH 96


>gi|315179035|gb|ADT85949.1| anti-sigma B factor antagonist, hypothetical [Vibrio furnissii
          NCTC 11218]
          Length = 109

 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 6/84 (7%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           G  +   +G      + E+   +        Q+    + L ++T ID+ G  ++++ +E
Sbjct: 9  QGPALAALSGPLDRDTVPELWAVLQQW---QPQNAECELSLKSVTRIDSAGMVMLIHLLE 65

Query: 64 ---KYHGKIKLQGVSTHIEQLFSL 84
             K +  I L  V   +  LF L
Sbjct: 66 HAKKQNCHIMLSFVPEQLRTLFQL 89


>gi|117924252|ref|YP_864869.1| anti-anti-sigma regulatory factor [Magnetococcus sp. MC-1]
 gi|117608008|gb|ABK43463.1| anti-anti-sigma regulatory factor [Magnetococcus sp. MC-1]
          Length = 104

 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 39/90 (43%), Gaps = 9/90 (10%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSA-IVDLSAITEIDTIGAELIMY 60
            +  TV R  G +   ++ E+ +     I  S Q + + I+DL+    +D+ G  +I+ 
Sbjct: 13 QNDSETVIRVRGRFNVQQLFEVNN-----IRPSDQPNHSYIIDLTETEFLDSSGMGIILR 67

Query: 61 FMEKYHGKIK---LQGVSTHIEQLFSLISF 87
            E+  G  +   ++     I +L   + F
Sbjct: 68 LREQVSGTKENMVIRNARPGIRRLLETVQF 97


>gi|297197210|ref|ZP_06914607.1| anti-sigma factor antagonist [Streptomyces sviceus ATCC 29083]
 gi|197717540|gb|EDY61574.1| anti-sigma factor antagonist [Streptomyces sviceus ATCC 29083]
          Length = 112

 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/87 (11%), Positives = 33/87 (37%), Gaps = 5/87 (5%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---M 62
            V   +G      ++E+ + +     ++ +    ++D+S +   D+ G   ++      
Sbjct: 14 GPVLELSGELDYANVAELHEVLDGRALRAGRC--LVLDMSGLEFCDSSGITALIAARSNA 71

Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTH 89
          +     + L  V  +I ++  ++    
Sbjct: 72 QAVQADVALAAVPPNILRVLRIVGLDQ 98


>gi|46579860|ref|YP_010668.1| anti-anti-sigma factor [Desulfovibrio vulgaris str.
          Hildenborough]
 gi|120602674|ref|YP_967074.1| anti-sigma-factor antagonist [Desulfovibrio vulgaris DP4]
 gi|46449276|gb|AAS95927.1| anti-anti-sigma factor, putative [Desulfovibrio vulgaris str.
          Hildenborough]
 gi|120562903|gb|ABM28647.1| anti-sigma-factor antagonist [Desulfovibrio vulgaris DP4]
 gi|311234139|gb|ADP86993.1| anti-sigma-factor antagonist [Desulfovibrio vulgaris RCH1]
          Length = 114

 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 34/89 (38%), Gaps = 4/89 (4%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
             + V   +G         +  ++  A++    +D A +DL+ +T +D+ G   ++   
Sbjct: 9  HGNVIVAVLSGELTLANAQHLRGELEEALSTQGVTDVA-LDLAGVTYLDSSGLGSLIAVS 67

Query: 63 EKYHG---KIKLQGVSTHIEQLFSLISFT 88
           +      +I L   S  + +L      +
Sbjct: 68 TRARASGCRILLYRPSKEVHKLLDAAQLS 96


>gi|308177914|ref|YP_003917320.1| hypothetical protein AARI_21290 [Arthrobacter arilaitensis Re117]
 gi|307745377|emb|CBT76349.1| UPF0182 protein [Arthrobacter arilaitensis Re117]
          Length = 1011

 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 46/124 (37%), Gaps = 21/124 (16%)

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY--------DIPFAVFFSR 300
           L+ VR         L++ +P++  +    A+ G    I  ++        D  F +    
Sbjct: 121 LEPVRRF-------LMVGIPVVIGIFAAVAVAGQWQTILLFFNQVGFGSTDPQFNMDLGF 173

Query: 301 FHSTATLANIFTGLIKAPFM-ACAIGIVA--MKEGFAVG-VHSNSLGKKVT--TCVVQSI 354
           F  +     +  G + +  +     G++   +  G  V      ++GK     T VV ++
Sbjct: 174 FVFSLPFIGLVNGFLISVVLLGGVAGLLTHYLYGGIRVEERGGITVGKAARVHTAVVVAV 233

Query: 355 SIVI 358
            +++
Sbjct: 234 FLIL 237


>gi|240127332|ref|ZP_04739993.1| hypothetical protein NgonS_01550 [Neisseria gonorrhoeae
          SK-93-1035]
 gi|268685701|ref|ZP_06152563.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
 gi|268625985|gb|EEZ58385.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
          Length = 92

 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 26/80 (32%), Gaps = 4/80 (5%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFMEKYH 66
               G+     ++    D      +  +    I VD   +   D+    L++  +    
Sbjct: 9  TLHIGGDITVKTLT---GDAFGRFRQQCRLKETIAVDFGGVKRADSACVSLLLEVLRGCK 65

Query: 67 GKIKLQGVSTHIEQLFSLIS 86
          G ++L G+   +  L  L  
Sbjct: 66 GSVRLTGIPESVRALSELYE 85


>gi|325922505|ref|ZP_08184268.1| putative NTP binding protein (contains STAS domain) [Xanthomonas
          gardneri ATCC 19865]
 gi|325924181|ref|ZP_08185741.1| putative NTP binding protein (contains STAS domain) [Xanthomonas
          gardneri ATCC 19865]
 gi|325545312|gb|EGD16606.1| putative NTP binding protein (contains STAS domain) [Xanthomonas
          gardneri ATCC 19865]
 gi|325547013|gb|EGD18104.1| putative NTP binding protein (contains STAS domain) [Xanthomonas
          gardneri ATCC 19865]
          Length = 97

 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 9/84 (10%), Positives = 30/84 (35%), Gaps = 7/84 (8%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66
               G      ++      +  ++         +DLS +  +D+ G  ++     +   
Sbjct: 13 TLALTGVLDRAAVTAAWPQAIAQLD-----GVRTLDLSGVQRLDSAGVAMLAELAARVRS 67

Query: 67 -GKIKLQGVSTHIEQLFSLISFTH 89
           G + + G ++ +++L +    + 
Sbjct: 68 TGTVTVVGEASGLDELRAAYRLSP 91


>gi|320104165|ref|YP_004179756.1| anti-sigma-factor antagonist [Isosphaera pallida ATCC 43644]
 gi|319751447|gb|ADV63207.1| anti-sigma-factor antagonist [Isosphaera pallida ATCC 43644]
          Length = 111

 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 37/70 (52%), Gaps = 4/70 (5%)

Query: 21 SEIADDVVMAINKSIQSDS-AIVDLSAITEIDTIGAELIMYFMEKYH---GKIKLQGVST 76
          +  + +   ++N  ++S S  + D+S I  +D+ G  +++  + + +   G ++L G+S 
Sbjct: 23 ASNSKEFRASVNPILESHSHVVFDMSKIAFVDSSGCGVLLSCLRELNSRGGDLRLCGLSP 82

Query: 77 HIEQLFSLIS 86
           +  LF L+ 
Sbjct: 83 QVRSLFELVR 92


>gi|290476803|ref|YP_003469714.1| hypothetical protein XBJ1_3834 [Xenorhabdus bovienii SS-2004]
 gi|289176147|emb|CBJ82952.1| conserved hypothetical protein [Xenorhabdus bovienii SS-2004]
          Length = 111

 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 34/85 (40%), Gaps = 8/85 (9%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61
          E   +     G      +  +          S+ ++   +D+S +  +D+ G  L ++  
Sbjct: 18 EQTGSTLFLHGTLDRDSLLPLWQQ-----KGSVMAEIENIDVSRLEHVDSTGLALFVHLK 72

Query: 62 --MEKYHGKIKLQGVSTHIEQLFSL 84
            M++   ++   G+S  +E L +L
Sbjct: 73 GDMQQRGKRLTFSGISERLETLIAL 97


>gi|320010157|gb|ADW05007.1| anti-anti-sigma factor [Streptomyces flavogriseus ATCC 33331]
          Length = 129

 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 7/55 (12%), Positives = 19/55 (34%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
          G    R  G+       ++ +     +       + ++D S +   D+ G   ++
Sbjct: 18 GAVRLRLVGDLDYDTSEQLVERAQACLAADPAPQTLVLDCSGLHMCDSSGVSALL 72


>gi|315646366|ref|ZP_07899484.1| anti-sigma-factor antagonist [Paenibacillus vortex V453]
 gi|315278009|gb|EFU41329.1| anti-sigma-factor antagonist [Paenibacillus vortex V453]
          Length = 117

 Score = 38.7 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 37/82 (45%), Gaps = 4/82 (4%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62
          I + R +G         +   +  AI +  Q++  ++ L  +  +D+ G  +I+    F+
Sbjct: 13 ILIVRLSGELDHHTADHVRMQLEEAIQRR-QTEHLVLSLKELDFMDSSGLGVILGRYKFI 71

Query: 63 EKYHGKIKLQGVSTHIEQLFSL 84
          ++  GK+ +  V   + +L  +
Sbjct: 72 KQKGGKMAVCDVKPQVYRLLEM 93


>gi|271965897|ref|YP_003340093.1| anti-anti-sigma regulatory factor [Streptosporangium roseum DSM
           43021]
 gi|270509072|gb|ACZ87350.1| anti-anti-sigma regulatory factor [Streptosporangium roseum DSM
           43021]
          Length = 109

 Score = 38.7 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/98 (10%), Positives = 35/98 (35%), Gaps = 5/98 (5%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +  G       G+      +E+        +  ++     +DLS +  +D+ G   ++  
Sbjct: 14  TAEGTVRLVLTGDLDYDTAAELFTLAQELFSADLR--LLELDLSGLDFVDSSGVAALINV 71

Query: 62  MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQ 96
                 +   +++  ++ ++  LF + +     ++   
Sbjct: 72  YNTARARNSAMRIIALTPYLRHLFKVTALDQVFELPPA 109


>gi|113461312|ref|YP_719381.1| hypothetical protein HS_1169 [Haemophilus somnus 129PT]
 gi|112823355|gb|ABI25444.1| conserved hypothetical protein [Haemophilus somnus 129PT]
          Length = 110

 Score = 38.7 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 30/86 (34%), Gaps = 4/86 (4%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKS-IQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
             R  G      +          ++ + +     + +LS +  ID+ G  L+  F+ +  
Sbjct: 18  TLRIMGALSRDTLLPFLQQRDELLSSAELVGQQLVWELSEVNRIDSAGFALLGDFINELE 77

Query: 67  GKI---KLQGVSTHIEQLFSLISFTH 89
            ++   K+      +E L  L   + 
Sbjct: 78  KQVSSQKIHNAPIQLEILADLFGLSD 103


>gi|303248528|ref|ZP_07334785.1| anti-sigma-factor antagonist [Desulfovibrio fructosovorans JJ]
 gi|302490058|gb|EFL49979.1| anti-sigma-factor antagonist [Desulfovibrio fructosovorans JJ]
          Length = 107

 Score = 38.7 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 36/98 (36%), Gaps = 4/98 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59
             +   V R +G       + +  ++ + I+ + Q    + ++  +  +D+ G  L++  
Sbjct: 8   ETDQALVIRLSGEIVMDLAANLKAELTLLIDAT-QKPEVVCNMRRVDFMDSSGVGLLIGI 66

Query: 60  -YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96
               +       +   S  I +L S++  T    I   
Sbjct: 67  RRLCQDKGKAFSVADPSPAIRKLISVLRLTEFFAIAPA 104


>gi|257792664|ref|YP_003183270.1| anti-sigma-factor antagonist [Eggerthella lenta DSM 2243]
 gi|257476561|gb|ACV56881.1| anti-sigma-factor antagonist [Eggerthella lenta DSM 2243]
          Length = 101

 Score = 38.7 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 9/94 (9%), Positives = 39/94 (41%), Gaps = 6/94 (6%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            G  V +  G+  +   +++ + +     ++   +  ++D + +  + + G  +++   +
Sbjct: 11  GGEAVLKLGGHLNTNTAADLEEALEPVFERT---NKVVLDFADLEYLSSAGLRVLVATQK 67

Query: 64  K---YHGKIKLQGVSTHIEQLFSLISFTHRKKIK 94
           +     G +++   S  I ++F +        ++
Sbjct: 68  RVTAAEGALRIVNASDDIREVFDITGLIDVFDVE 101


>gi|261250146|ref|ZP_05942722.1| hypothetical protein VIA_000166 [Vibrio orientalis CIP 102891]
 gi|260939262|gb|EEX95248.1| hypothetical protein VIA_000166 [Vibrio orientalis CIP 102891]
          Length = 109

 Score = 38.7 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 6/84 (7%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          NG   F  +G+     + ++   +     +        V L  + +ID+ G  ++++ +E
Sbjct: 9  NGAAEFALSGDLNRESVPKLWSSLKQ---QQWPGSEVEVSLQQLKKIDSAGMVMLIHLIE 65

Query: 64 ---KYHGKIKLQGVSTHIEQLFSL 84
             K +  I L  V   +  LF L
Sbjct: 66 HAKKQNCHIMLSFVPDELRTLFQL 89


>gi|240079834|ref|ZP_04724377.1| hypothetical protein NgonF_00756 [Neisseria gonorrhoeae FA19]
 gi|268595979|ref|ZP_06130146.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268549767|gb|EEZ44786.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
          Length = 92

 Score = 38.7 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 26/79 (32%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
               G+     ++   D       +    ++  VD   +   D+    L++  +    G
Sbjct: 9  TLHIGGDITVKTLTG--DAFGRFRQQCCLKETIAVDFGGVKRADSACVSLLLEVLRGCKG 66

Query: 68 KIKLQGVSTHIEQLFSLIS 86
           ++L G+   +  L  L  
Sbjct: 67 SVRLTGIPESVRALSELYE 85


>gi|71274640|ref|ZP_00650928.1| Sulfate transporter/antisigma-factor antagonist STAS [Xylella
          fastidiosa Dixon]
 gi|71899648|ref|ZP_00681802.1| Sulfate transporter/antisigma-factor antagonist STAS [Xylella
          fastidiosa Ann-1]
 gi|170730906|ref|YP_001776339.1| hypothetical protein Xfasm12_1820 [Xylella fastidiosa M12]
 gi|71164372|gb|EAO14086.1| Sulfate transporter/antisigma-factor antagonist STAS [Xylella
          fastidiosa Dixon]
 gi|71730600|gb|EAO32677.1| Sulfate transporter/antisigma-factor antagonist STAS [Xylella
          fastidiosa Ann-1]
 gi|167965699|gb|ACA12709.1| conserved hypothetical protein [Xylella fastidiosa M12]
          Length = 101

 Score = 38.7 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 26/61 (42%), Gaps = 3/61 (4%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
             +G         +  ++ +   +S  +    +DL+ + ++D+ G  L+   ME+   +
Sbjct: 14 LVLSGPLNRDAAIRLWSEIQV---QSKSNGVCQLDLTGVEQLDSAGVALLAEVMERIRVQ 70

Query: 69 I 69
          +
Sbjct: 71 V 71


>gi|269796790|ref|YP_003316245.1| STAS domain-containing protein [Sanguibacter keddieii DSM 10542]
 gi|269098975|gb|ACZ23411.1| STAS domain-containing protein [Sanguibacter keddieii DSM 10542]
          Length = 123

 Score = 38.7 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 29/65 (44%), Gaps = 1/65 (1%)

Query: 21 SEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIE 79
          ++++ D+  A     ++   + VD+  +T +D+ G   +        G+++L      ++
Sbjct: 30 ADLSADLQQATEDVREAGLPVDVDVHHVTFMDSSGVAFLARLTSVTPGRVRLHNTPPTVK 89

Query: 80 QLFSL 84
           L  +
Sbjct: 90 FLLEV 94


>gi|271961671|ref|YP_003335867.1| anti-anti-sigma factor family protein [Streptosporangium roseum DSM
           43021]
 gi|270504846|gb|ACZ83124.1| anti-anti-sigma factor family protein [Streptosporangium roseum DSM
           43021]
          Length = 123

 Score = 38.7 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 5/88 (5%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
           +++   AG         +  D+  +I     S   I+DL  +T  D+ G ++ +   +  
Sbjct: 18  VSLLALAGELDYTNAERLQHDLQESIGPD--SRDLIIDLKDLTFCDSTGIQVFLAVRKLV 75

Query: 66  HGK---IKLQGVSTHIEQLFSLISFTHR 90
           HG+   + L  +   +E+LF L   T  
Sbjct: 76  HGRGHSVVLAQLHPRLERLFHLTGLTQA 103


>gi|241759036|ref|ZP_04757148.1| conserved hypothetical protein [Neisseria flavescens SK114]
 gi|241320857|gb|EER57090.1| conserved hypothetical protein [Neisseria flavescens SK114]
          Length = 92

 Score = 38.7 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              +G+     ++  A        +  ++D   +D S + + D+    L++  + +   
Sbjct: 9  TLYISGDVTVKTLTASAFARYEQQCRLKETD--RIDFSQVGKADSACVSLLLNALRRTDK 66

Query: 68 KIKLQGVSTHIEQLFSLIS 86
          K  +Q +   +  L  L  
Sbjct: 67 KPTIQNIPDSVRALAELYE 85


>gi|307261765|ref|ZP_07543431.1| hypothetical protein appser12_13240 [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306868583|gb|EFN00394.1| hypothetical protein appser12_13240 [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 117

 Score = 38.7 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 28/90 (31%), Gaps = 3/90 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
             N     + +G      +  +       ++    +     DL  +  +D+ G  L+   
Sbjct: 13  QNNESLFVKLSGELTRDMLLPLWKQRASFLSPK-GNQHIYWDLKDLERVDSAGFTLLAEL 71

Query: 62  MEKYHGKIK--LQGVSTHIEQLFSLISFTH 89
           +  Y  +    L  V   ++ L  L   T 
Sbjct: 72  LNYYQKQTPNCLIHVPEVVKTLADLFDLTD 101


>gi|254381467|ref|ZP_04996831.1| hypothetical protein SSAG_01133 [Streptomyces sp. Mg1]
 gi|194340376|gb|EDX21342.1| hypothetical protein SSAG_01133 [Streptomyces sp. Mg1]
          Length = 110

 Score = 38.7 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 6/83 (7%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
          G  V    G         + +      +  +Q  + +VDLSA+T +D+    +++    +
Sbjct: 13 GRFVVFVTGELDINTCPRVTETTD---SLPLQGQTLLVDLSAVTFMDSAALNMLLRLRHR 69

Query: 65 YH---GKIKLQGVSTHIEQLFSL 84
           H   G +KL G S    Q+  +
Sbjct: 70 AHAEGGTLKLCGASDQTLQVLDV 92


>gi|198282481|ref|YP_002218802.1| hypothetical protein Lferr_0341 [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|198247002|gb|ACH82595.1| hypothetical protein Lferr_0341 [Acidithiobacillus ferrooxidans
           ATCC 53993]
          Length = 105

 Score = 38.7 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 38/93 (40%), Gaps = 6/93 (6%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G       G+W+   ++++   +          D   + ++ +   D+    +++ + +
Sbjct: 13  DGAGWLFLRGDWR---VAQLDKALQFFSWAKDGRDCTEISVAELDAADSATLAVLLEWTQ 69

Query: 64  KYHGK---IKLQGVSTHIEQLFSLISFTHRKKI 93
           +  G+   +++ G S  + +L SL S      +
Sbjct: 70  QAAGRGVPLRIHGASPKLRELASLYSLQDILPL 102


>gi|297204118|ref|ZP_06921515.1| anti-sigma factor antagonist [Streptomyces sviceus ATCC 29083]
 gi|197714783|gb|EDY58817.1| anti-sigma factor antagonist [Streptomyces sviceus ATCC 29083]
          Length = 124

 Score = 38.7 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 39/92 (42%), Gaps = 12/92 (13%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAI-----NKSIQSDSAIVDLSAITEIDTIGAE 56
           + +GI V    G+       ++ D +  A+         Q+   + DLS +T +D+ G  
Sbjct: 19  TADGIRVVTLRGD----IDHDVKDALTTALLPPDGADDGQAPRVVADLSGVTFLDSTGIN 74

Query: 57  LIMYFMEK---YHGKIKLQGVSTHIEQLFSLI 85
           + +   ++     G ++L      + ++F L+
Sbjct: 75  VFVQVHQQVSTAQGWLRLAAARESVTRVFELV 106


>gi|28868134|ref|NP_790753.1| STAS domain-containing protein [Pseudomonas syringae pv. tomato
          str. DC3000]
 gi|28851371|gb|AAO54448.1| STAS domain protein [Pseudomonas syringae pv. tomato str. DC3000]
 gi|331018816|gb|EGH98872.1| STAS domain protein [Pseudomonas syringae pv. lachrymans str.
          M302278PT]
          Length = 96

 Score = 38.7 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 6/86 (6%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---M 59
           + I   +  G      ++E+A  ++  I  + +     VDLS +TE+D  G +L+    
Sbjct: 8  RDDIAHMQIDGELTIYTVTELAARLLPQIAGAAR---VEVDLSRVTEMDGAGLQLLAVIQ 64

Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLI 85
              K    + L G S  + + F L 
Sbjct: 65 REAGKTGTALHLTGQSQAVTETFELC 90


>gi|121998895|ref|YP_001003682.1| anti-sigma-factor antagonist [Halorhodospira halophila SL1]
 gi|121590300|gb|ABM62880.1| anti-sigma-factor antagonist [Halorhodospira halophila SL1]
          Length = 104

 Score = 38.7 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 9/92 (9%), Positives = 32/92 (34%), Gaps = 2/92 (2%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           R  G  +   +  +          + +     +DL+ +   D+ G  L++ +  +     
Sbjct: 15  RVTGRLELDTVGALWPQGTALF--TAEGGVCEIDLAGVERTDSAGVALLIDWTRQARAHG 72

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
               +    +QL +++  +  + +     + +
Sbjct: 73  GRLCLCHVPQQLLAIVHASGAEGVLEIADEPA 104


>gi|300718602|ref|YP_003743405.1| Anti-sigma B factor antagonist [Erwinia billingiae Eb661]
 gi|299064438|emb|CAX61558.1| Anti-sigma B factor antagonist [Erwinia billingiae Eb661]
          Length = 98

 Score = 38.7 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 9/79 (11%), Positives = 31/79 (39%), Gaps = 8/79 (10%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---KY 65
             +G  +   +  +         +++      +D+S +  +D+ G  L+++  +   + 
Sbjct: 14 LHLSGELQRETLLALWKQ-----RETVMKQIDTIDVSELDRVDSAGLALLVHLRQIALQQ 68

Query: 66 HGKIKLQGVSTHIEQLFSL 84
              +  G++  +  L +L
Sbjct: 69 GKAPQFTGINDKLHSLITL 87


>gi|78222299|ref|YP_384046.1| hypothetical protein Gmet_1081 [Geobacter metallireducens GS-15]
 gi|78193554|gb|ABB31321.1| hypothetical protein Gmet_1081 [Geobacter metallireducens GS-15]
          Length = 111

 Score = 38.7 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/86 (13%), Positives = 33/86 (38%), Gaps = 8/86 (9%)

Query: 5  GITVFRFAGNWK----SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          G    R  G+W     + ++  + + +        Q    ++D++ +   D  G +L+  
Sbjct: 7  GTLTIRLTGDWSMTGVTQQLLPLTEHLAALSGVHPQQVQPVIDMAEVALFDACGCQLLTI 66

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLIS 86
           +      ++L G S  +  + + + 
Sbjct: 67 LLR----HLRLLGFSPVLANIPAELR 88


>gi|258514280|ref|YP_003190502.1| Na/Pi-cotransporter II-related protein [Desulfotomaculum
           acetoxidans DSM 771]
 gi|257777985|gb|ACV61879.1| Na/Pi-cotransporter II-related protein [Desulfotomaculum
           acetoxidans DSM 771]
          Length = 566

 Score = 38.3 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 77/222 (34%), Gaps = 14/222 (6%)

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
           L   ++ +  + +  +   +  +   G ++            A    +  ++   +  + 
Sbjct: 23  LSESLQTIAGLRLKIILSTLTKNRFVGMLLGVVITVLFQSSTATSVILVGLTSASIITLN 82

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
             L+ ++ +G  G+ I A++ + KI E   A+  +G+  + I  + R+         L I
Sbjct: 83  QTLSVLLGSG-IGTTITAQLIAFKITE--VALPMVGIGAMIIFFTKRVKHRQYG---LAI 136

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           L      +G  I+    Y +    FF               LI A   A  +   A   G
Sbjct: 137 LGFGLTFLGLKIMSDTMYPLRDDPFFQHLMVGLENKPFLAMLI-ASLFAFLVHSSAATIG 195

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIID--SLFAIFYFAIG 372
             + +    L     T +  +I ++   +  + F     ++G
Sbjct: 196 IIMLLAMQGL-----TSLESAIFLLFGANIGTCFTAILSSLG 232


>gi|218437394|ref|YP_002375723.1| anti-sigma-factor antagonist [Cyanothece sp. PCC 7424]
 gi|218170122|gb|ACK68855.1| anti-sigma-factor antagonist [Cyanothece sp. PCC 7424]
          Length = 118

 Score = 38.3 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/115 (10%), Positives = 42/115 (36%), Gaps = 4/115 (3%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI-- 58
           +  + I      G   +  I++  + + + ++   +S   +VD++ +  +D+ G   +  
Sbjct: 5   LETDTIVTLEPTGYLTAANITQFQEQLTLNVSDPEKS-IFLVDMTQVEFLDSAGLMALAS 63

Query: 59  -MYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHY 112
                +    +  +  +   ++ +F L        I + +       N  +++  
Sbjct: 64  ACRLAQSLDKQFSICSIPPSVKIIFELTQLDRFLDIYDNRETFEATLNQTQDIAA 118


>gi|34497966|ref|NP_902181.1| hypothetical protein CV_2511 [Chromobacterium violaceum ATCC
          12472]
 gi|34103821|gb|AAQ60182.1| hypothetical protein CV_2511 [Chromobacterium violaceum ATCC
          12472]
          Length = 106

 Score = 38.3 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 36/85 (42%), Gaps = 5/85 (5%)

Query: 1  MSENGITVFR-FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
          + ++G T      G        ++ D+++  +N     +   +DLS +TE+D  GA+L+ 
Sbjct: 5  LRQDGETTLAALDGELTIFTAEDMQDELLGLLN----HERVALDLSGLTELDGCGAQLLC 60

Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSL 84
            + +     K   ++     L  +
Sbjct: 61 ILLAEAARLEKTMAIAAGNPLLDEV 85


>gi|115376640|ref|ZP_01463870.1| sulfate permease [Stigmatella aurantiaca DW4/3-1]
 gi|310819450|ref|YP_003951808.1| carbonate dehydratase [Stigmatella aurantiaca DW4/3-1]
 gi|115366383|gb|EAU65388.1| sulfate permease [Stigmatella aurantiaca DW4/3-1]
 gi|309392522|gb|ADO69981.1| Carbonate dehydratase [Stigmatella aurantiaca DW4/3-1]
          Length = 773

 Score = 38.3 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 38/85 (44%), Gaps = 4/85 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
              G      +G       S++ D +     K  +S   ++D+SA+T +D+ GA++++  
Sbjct: 437 ETPGAYRVVLSGPLTFMSSSKL-DTLRTQSAKLDRSRGVVIDMSAVTAVDSSGADMLIGL 495

Query: 62  MEKY---HGKIKLQGVSTHIEQLFS 83
           +        K+ LQG+    ++  +
Sbjct: 496 VNDLLNADLKVVLQGLQPEFQRALT 520


>gi|197337497|ref|YP_002158686.1| anti-anti-sigma regulatory factor [Vibrio fischeri MJ11]
 gi|197314749|gb|ACH64198.1| anti-anti-sigma regulatory factor [Vibrio fischeri MJ11]
          Length = 105

 Score = 38.3 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 36/95 (37%), Gaps = 5/95 (5%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S   I V    G+  +    +I   +   I +  +     +DLS +  +D+ G   I+Y 
Sbjct: 8   SNADILVLSVQGDMDAIGCRDIQPSIDSVIEQ--EHHQVQIDLSHVAFLDSSGIGAIVYL 65

Query: 62  MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKI 93
            ++       ++++       +L  L+   +   +
Sbjct: 66  YKRLIEKDRTMQIKNAHGQPLELLKLLRIENAIPV 100


>gi|117619997|ref|YP_858372.1| anti-anti-sigma factor family protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117561404|gb|ABK38352.1| anti-anti-sigma factor family protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 139

 Score = 38.3 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 35/83 (42%), Gaps = 9/83 (10%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G    R +G  ++ ++ E+         ++       ++L  +T +D+ G  L++ + + 
Sbjct: 46  GTQEMRLSGELQAAQVVELWQR------RADWWQEDQIELGDVTTLDSAGLALLVKWAKA 99

Query: 65  YHGK---IKLQGVSTHIEQLFSL 84
              +    +L G ST    L +L
Sbjct: 100 ALARGATPQLVGASTDFYTLANL 122


>gi|297199462|ref|ZP_06916859.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|197712996|gb|EDY57030.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
          Length = 233

 Score = 38.3 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 37/109 (33%), Gaps = 8/109 (7%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQ-SDSAIVDLSAITEIDTIGAELIMYF 61
           + G  V    G      I   AD +   + +  + +D   +D++ +T +DT G + +   
Sbjct: 33  DGGRAVLVARGEL----IHGCADALGRTLARLPEDTDRVDLDMTGVTFMDTTGLQFLEVL 88

Query: 62  ---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF 107
                +   ++   G +    ++  +        +     +     +S 
Sbjct: 89  DTYGRRRRVRVTATGWAEQPRRVLEMAGLDPDDPLHGPGTRWEPVPSSM 137


>gi|217077881|ref|YP_002335599.1| anti-sigma factor antagonist [Thermosipho africanus TCF52B]
 gi|217037736|gb|ACJ76258.1| anti-sigma factor antagonist [Thermosipho africanus TCF52B]
          Length = 110

 Score = 38.3 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 34/79 (43%), Gaps = 2/79 (2%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG-AELIM 59
          + ++  T+ +  G+  +   +++  D+   +  + +    ++DLS +  ID+ G   L+ 
Sbjct: 9  IEKDQYTIAKVTGDIDAYHSADVKKDIREKMLATEKGK-FVIDLSEVNYIDSAGLGSLVA 67

Query: 60 YFMEKYHGKIKLQGVSTHI 78
             +      +L  +S   
Sbjct: 68 ILKDARLNNKELALLSPKQ 86


>gi|218550474|ref|YP_002384265.1| hypothetical protein EFER_3168 [Escherichia fergusonii ATCC
          35469]
 gi|218358015|emb|CAQ90661.1| conserved hypothetical protein [Escherichia fergusonii ATCC
          35469]
 gi|324115205|gb|EGC09169.1| hypothetical protein ERIG_00081 [Escherichia fergusonii B253]
 gi|325498772|gb|EGC96631.1| hypothetical protein ECD227_2869 [Escherichia fergusonii ECD227]
          Length = 97

 Score = 38.3 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 33/80 (41%), Gaps = 8/80 (10%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EK 64
              AG      ++ + ++        +      +DLS I  +DT G  L+++ +   ++
Sbjct: 13 TLALAGELDQDVLNPLWEE-----RNEVMQGVTCIDLSKIARVDTGGLALLIHLIDIAKR 67

Query: 65 YHGKIKLQGVSTHIEQLFSL 84
              + L+GV+  +  L  L
Sbjct: 68 QGNSVTLRGVNEKVYTLAKL 87


>gi|296268033|ref|YP_003650665.1| anti-sigma-factor antagonist [Thermobispora bispora DSM 43833]
 gi|296090820|gb|ADG86772.1| anti-sigma-factor antagonist [Thermobispora bispora DSM 43833]
          Length = 116

 Score = 38.3 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/101 (11%), Positives = 39/101 (38%), Gaps = 5/101 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S  G  +   +G        ++  +    I+ S Q    ++D+S +   D+ G  +++  
Sbjct: 9   SSGGTAIVAVSGEIDLYTAPQLQAEFARLISTSPQR--VVIDMSEVEFCDSTGVNVLLSA 66

Query: 62  MEKYH---GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
           +++     G +++    + + ++  +        + +  P 
Sbjct: 67  LKRLRERGGDLEVAAPRSAVRKILQVTGLDSVFTVHDAVPD 107


>gi|198450604|ref|XP_001358061.2| GA10579 [Drosophila pseudoobscura pseudoobscura]
 gi|198131106|gb|EAL27198.2| GA10579 [Drosophila pseudoobscura pseudoobscura]
          Length = 815

 Score = 38.3 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 43/145 (29%), Gaps = 14/145 (9%)

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q    LS       +        L  +    T+++ A  +  +      SM+  E+ D  
Sbjct: 187 QQVVSLSGLAIAEATSS-TYYANLLNMSPATTSLIAAVAATKSYND--SSMRW-EQFDGN 242

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP-FAVFFSRFHS 303
              G D +         A+ I   +  I+     +IG S VI      P      + F  
Sbjct: 243 VDFGFDPLYRHS----LAMSIVYCVAYIVVFLVGLIGNSFVIAVVLRAPRMRTVTNYFIV 298

Query: 304 TATLANIFTGLIKAPFMACAIGIVA 328
              +A+I               ++ 
Sbjct: 299 NLAIADILV-----IVFCLPATLIG 318


>gi|302037684|ref|YP_003798006.1| putative anti-sigma factor antagonist [Candidatus Nitrospira
          defluvii]
 gi|300605748|emb|CBK42081.1| putative Anti-sigma factor antagonist [Candidatus Nitrospira
          defluvii]
          Length = 112

 Score = 38.3 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 31/87 (35%), Gaps = 5/87 (5%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--- 58
          + N     R  GN+   +     + +       ++    ++DLS +  +D+    L+   
Sbjct: 7  TSNKKATLRLEGNFTYTQRKAFQEMLKTVCTDQVE--EVVIDLSQVAFLDSAALGLLMIS 64

Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLI 85
             +E    K+ L      + Q+  L 
Sbjct: 65 HRQLEAERRKLSLAYPQPTVRQIIELA 91


>gi|260770989|ref|ZP_05879918.1| predicted NTP binding protein (contains STAS domain) [Vibrio
          furnissii CIP 102972]
 gi|260614226|gb|EEX39416.1| predicted NTP binding protein (contains STAS domain) [Vibrio
          furnissii CIP 102972]
          Length = 109

 Score = 38.3 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 6/84 (7%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           G  +   +G      + E+   +        Q+    + L ++T ID+ G  ++++ +E
Sbjct: 9  QGPALAALSGPLDRDTVPELWAVLQQW---HPQNAECELSLKSVTRIDSAGMVMLIHLLE 65

Query: 64 ---KYHGKIKLQGVSTHIEQLFSL 84
             K +  I L  V   +  LF L
Sbjct: 66 HAKKQNCHIMLSFVPEQLRTLFQL 89


>gi|311900800|dbj|BAJ33208.1| putative antagonist protein [Kitasatospora setae KM-6054]
          Length = 130

 Score = 38.3 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 37/99 (37%), Gaps = 5/99 (5%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G  V R AG+     ++     +   +     +   +VDL+ +   D+ G  +++    
Sbjct: 28  DGTVVCRIAGDLDIESLAPARKALAEVLR--GGNRLVVVDLAQVAFCDSSGLNMLLTARA 85

Query: 64  KYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
                   ++L  VS  +E+L  +        ++   P 
Sbjct: 86  DALAAGAVLRLAAVSHPVERLLEITGAAAVFDVRPTVPA 124


>gi|195166176|ref|XP_002023911.1| GL27160 [Drosophila persimilis]
 gi|194106071|gb|EDW28114.1| GL27160 [Drosophila persimilis]
          Length = 821

 Score = 38.3 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 43/145 (29%), Gaps = 14/145 (9%)

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q    LS       +        L  +    T+++ A  +  +      SM+  E+ D  
Sbjct: 193 QQVVSLSGLAIAEATSS-TYYANLLNMSPATTSLIAAVAATKSYND--SSMRW-EQFDGN 248

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP-FAVFFSRFHS 303
              G D +         A+ I   +  I+     +IG S VI      P      + F  
Sbjct: 249 VDFGFDPLYRHS----LAMSIVYCVAYIVVFLVGLIGNSFVIAVVLRAPRMRTVTNYFIV 304

Query: 304 TATLANIFTGLIKAPFMACAIGIVA 328
              +A+I               ++ 
Sbjct: 305 NLAIADILV-----IVFCLPATLIG 324


>gi|283850920|ref|ZP_06368205.1| anti-sigma-factor antagonist [Desulfovibrio sp. FW1012B]
 gi|283573566|gb|EFC21541.1| anti-sigma-factor antagonist [Desulfovibrio sp. FW1012B]
          Length = 115

 Score = 38.3 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 36/103 (34%), Gaps = 4/103 (3%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAEL---IMYFME 63
            V   +G      + E+  ++   I  + +  + ++DLS +  +D+ G  L   +    E
Sbjct: 13  LVIGLSGEIIMDVVIELKAEIAPLIQNASR-KAVVLDLSGVAFLDSSGVGLFIGLRRLCE 71

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106
                  +   S  I +LF ++  T    +            S
Sbjct: 72  DEGKAFSIANPSPPIRKLFDMLRLTDYFAVSATPVTSPGATPS 114


>gi|284008695|emb|CBA75358.1| anti-sigma factor antagonist [Arsenophonus nasoniae]
          Length = 91

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 32/85 (37%), Gaps = 8/85 (9%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +NG T+    G      +          +         ++++S ++ ID+ G  + +  
Sbjct: 5  QQNGQTLI-LTGELDRDTLPAFWQQRQQLLK-----GINVINVSQLSHIDSTGLAMFVRL 58

Query: 62 M--EKYHGKIKLQGVSTHIEQLFSL 84
             ++   K  L+G+S   + L  L
Sbjct: 59 KSEQQSGNKWVLEGISERFKTLIRL 83


>gi|114564527|ref|YP_752041.1| SpoIIAA family protein [Shewanella frigidimarina NCIMB 400]
 gi|114335820|gb|ABI73202.1| SpoIIAA family protein [Shewanella frigidimarina NCIMB 400]
          Length = 107

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 37/93 (39%), Gaps = 13/93 (13%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           ++   +   +G     E+ ++          S Q    +VDLSA+  +D+ G  L++ F
Sbjct: 6  QQDQRCIV--SGRLTQDEVKQLWPKRHELFTASTQ----VVDLSALEYVDSAGVALLLAF 59

Query: 62 M-------EKYHGKIKLQGVSTHIEQLFSLISF 87
          +       ++     +L   S  ++++  L   
Sbjct: 60 IKLHASSSQETSVSRQLVNPSEQLKKMIELYDL 92


>gi|126651481|ref|ZP_01723685.1| anti-sigma factor antagonist [Bacillus sp. B14905]
 gi|126591734|gb|EAZ85830.1| anti-sigma factor antagonist [Bacillus sp. B14905]
          Length = 127

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 3/69 (4%)

Query: 33  KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY---HGKIKLQGVSTHIEQLFSLISFTH 89
           K  +     +DLS +  +D+ G  + + F ++    +GK+KL G+ST +++LF +   + 
Sbjct: 55  KITEGLEIELDLSKVNYMDSTGLGIFVAFYKRTLRENGKVKLVGLSTRLQRLFEITGLSD 114

Query: 90  RKKIKNQKP 98
              I+  K 
Sbjct: 115 LMDIETDKK 123


>gi|21243591|ref|NP_643173.1| hypothetical protein XAC2864 [Xanthomonas axonopodis pv. citri
          str. 306]
 gi|78048575|ref|YP_364750.1| putative anti-anti-sigma factor [Xanthomonas campestris pv.
          vesicatoria str. 85-10]
 gi|294625044|ref|ZP_06703693.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
          aurantifolii str. ICPB 11122]
 gi|294665333|ref|ZP_06730624.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
          aurantifolii str. ICPB 10535]
 gi|325928059|ref|ZP_08189272.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma
          factor) [Xanthomonas perforans 91-118]
 gi|21109162|gb|AAM37709.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
          str. 306]
 gi|78037005|emb|CAJ24725.1| putative anti-anti-sigma factor [Xanthomonas campestris pv.
          vesicatoria str. 85-10]
 gi|292600674|gb|EFF44762.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
          aurantifolii str. ICPB 11122]
 gi|292604882|gb|EFF48242.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
          aurantifolii str. ICPB 10535]
 gi|325541557|gb|EGD13086.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma
          factor) [Xanthomonas perforans 91-118]
          Length = 109

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 31/81 (38%), Gaps = 3/81 (3%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
                G       +E+   +  A+   +      +DL+A++EIDT G +L++   +   
Sbjct: 12 LTLALEGEMTIRRAAELKPLLQPAL---LHPGGLHLDLAAVSEIDTTGLQLLLATKQAIQ 68

Query: 67 GKIKLQGVSTHIEQLFSLISF 87
             +   ++     +  +I  
Sbjct: 69 ADGRPFSLTDSSRAVVDVIEL 89


>gi|183220971|ref|YP_001838967.1| putative anti-sigma factor antagonist [Leptospira biflexa serovar
          Patoc strain 'Patoc 1 (Paris)']
 gi|189911066|ref|YP_001962621.1| anti-sigma factor antagonist [Leptospira biflexa serovar Patoc
          strain 'Patoc 1 (Ames)']
 gi|167775742|gb|ABZ94043.1| Anti-Sigma factor antagonist [Leptospira biflexa serovar Patoc
          strain 'Patoc 1 (Ames)']
 gi|167779393|gb|ABZ97691.1| Putative anti-sigma factor antagonist [Leptospira biflexa serovar
          Patoc strain 'Patoc 1 (Paris)']
          Length = 123

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 27/56 (48%), Gaps = 3/56 (5%)

Query: 36 QSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK---IKLQGVSTHIEQLFSLISFT 88
          +     +DL+ I  ID+ G + +++  ++ H K   ++L   S  + ++  L+   
Sbjct: 41 KGKRTKLDLNGIERIDSAGIQFLIFIKKRSHSKHQVLELTNHSLPVLKVLDLLGLV 96


>gi|139438601|ref|ZP_01772117.1| Hypothetical protein COLAER_01115 [Collinsella aerofaciens ATCC
           25986]
 gi|133776140|gb|EBA39960.1| Hypothetical protein COLAER_01115 [Collinsella aerofaciens ATCC
           25986]
          Length = 464

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 54/165 (32%), Gaps = 10/165 (6%)

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
               ++ +   ++    A Q      + G  +  +  +S          L A+   G SG
Sbjct: 57  QSTDIIQVALILSAIDTALQAFAPFRRIGGGLPIVMGVSFA-------FLPALQAMGASG 109

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
            +  A +G   +   +  +  +    ++ L  P +   +I    +++       +   + 
Sbjct: 110 FSFGALLGGEIVGGAVAVLFGLAYSKIKWLFPPVVTGTVIFSIGVSLYPTAVKYMAGGMG 169

Query: 286 IWKYYDIPFA-VFFSRFHSTATLANIFTGLIK--APFMACAIGIV 327
              +       V    F     LAN   G +K  + F    +G++
Sbjct: 170 TPLWGTPQAWCVALITFAVVFALANFGKGTLKLGSVFFGMIVGMI 214


>gi|325922307|ref|ZP_08184087.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma
          factor) [Xanthomonas gardneri ATCC 19865]
 gi|325547212|gb|EGD18286.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma
          factor) [Xanthomonas gardneri ATCC 19865]
          Length = 109

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 31/81 (38%), Gaps = 3/81 (3%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
                G       +E+   +  A+   +      +DL+A++EIDT G +L++   +   
Sbjct: 12 LTLALEGEMTIRRAAELKPLLQPAL---LHPGGLHLDLAAVSEIDTTGLQLLLATKQAIQ 68

Query: 67 GKIKLQGVSTHIEQLFSLISF 87
             +   ++     +  +I  
Sbjct: 69 ADGRPFSLTDSSRAVVDVIEL 89


>gi|162450986|ref|YP_001613353.1| positive regulator of sigma-B [Sorangium cellulosum 'So ce 56']
 gi|161161568|emb|CAN92873.1| positive regulator of sigma-B [Sorangium cellulosum 'So ce 56']
          Length = 287

 Score = 37.9 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 31/82 (37%), Gaps = 4/82 (4%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           + + V    G        ++A+ ++  I     +   IVDL+ ++  DT  A  +    +
Sbjct: 178 DEVLVLPLIGTLDERRSQQLAEALLDKIADK-GAQCCIVDLTGVSAFDTRAASALARIAQ 236

Query: 64  KYHG---KIKLQGVSTHIEQLF 82
                  ++ L G+   + Q  
Sbjct: 237 AVRLLGVEVVLTGIRPEVAQAL 258


>gi|290955149|ref|YP_003486331.1| anti-sigma-factor antagonist [Streptomyces scabiei 87.22]
 gi|260644675|emb|CBG67760.1| putative anti-sigma-factor antagonist [Streptomyces scabiei 87.22]
          Length = 122

 Score = 37.9 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 9/80 (11%), Positives = 32/80 (40%)

Query: 19  EISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHI 78
           ++ ++ ++ ++    +      +VDL  +T +D+ G  +++    +  G+     ++   
Sbjct: 35  DVKDLFEEALLTGGVAAPPPRIVVDLGGVTFMDSSGINVLVAAHRRVSGERGWLRIAAAQ 94

Query: 79  EQLFSLISFTHRKKIKNQKP 98
           E +  ++            P
Sbjct: 95  ESVLRVLQLVGVDTFIPCHP 114


>gi|326438134|gb|EGD83704.1| hypothetical protein PTSG_11459 [Salpingoeca sp. ATCC 50818]
          Length = 316

 Score = 37.9 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 1/65 (1%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            GI V +  G+   P +  I D +V  + +     + IVD S ++ ID  GA  +   + 
Sbjct: 179 GGIMVLQLGGSLMFPAVEHIKDMLVE-LRRESSCPAVIVDFSKVSFIDYTGAHGLQDVLR 237

Query: 64  KYHGK 68
           +   +
Sbjct: 238 ELESE 242


>gi|258405515|ref|YP_003198257.1| anti-sigma-factor antagonist [Desulfohalobium retbaense DSM 5692]
 gi|257797742|gb|ACV68679.1| anti-sigma-factor antagonist [Desulfohalobium retbaense DSM 5692]
          Length = 114

 Score = 37.9 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 28/67 (41%), Gaps = 1/67 (1%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            NG+    ++G       S++ + +  A+       + ++DLS    +D+ G   ++  
Sbjct: 8  QRNGVCQVTYSGELTLEVTSQLKERIEQALENE-HCQALVMDLSETVFLDSSGIGFLVSL 66

Query: 62 MEKYHGK 68
           +K   +
Sbjct: 67 NKKMRQQ 73


>gi|220904524|ref|YP_002479836.1| anti-sigma-factor antagonist [Desulfovibrio desulfuricans subsp.
          desulfuricans str. ATCC 27774]
 gi|219868823|gb|ACL49158.1| anti-sigma-factor antagonist [Desulfovibrio desulfuricans subsp.
          desulfuricans str. ATCC 27774]
          Length = 117

 Score = 37.9 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 36/88 (40%), Gaps = 1/88 (1%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          S   +TV R+ G+   P++ + +  +   +         ++DLS +  +DT G  +++  
Sbjct: 8  SHKNVTVLRYLGDMLLPDVPQFSRQLEAYLLAP-GIRQVVLDLSHVNRVDTSGLGVLVSA 66

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTH 89
            K  G  +   + T    +  L+    
Sbjct: 67 STKSRGHGRRLVLLTPAPHVVELLKKVE 94


>gi|313905658|ref|ZP_07839019.1| hypothetical protein EubceDRAFT_1734 [Eubacterium cellulosolvens 6]
 gi|313469482|gb|EFR64823.1| hypothetical protein EubceDRAFT_1734 [Eubacterium cellulosolvens 6]
          Length = 676

 Score = 37.9 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 25/198 (12%), Positives = 68/198 (34%), Gaps = 24/198 (12%)

Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ---FG 194
           +  +   ++ + + +L  L      +G+  +P+ +L+S      +   G   L +   FG
Sbjct: 6   SLSKLVRNNCRRRAWLFFL---TMLIGIIILPIAVLVSVRVSTGVDVIGGSTLVKEAFFG 62

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
            ++       +  +  I  +L   ++     S +      M  + + D   ++ +   ++
Sbjct: 63  WKVSPAQDAFLSTVTPINPILMMAILVDAFLSGVTG-FAYMNKSNQTDFYYSLPVKRSKL 121

Query: 255 L-----------ISPRIWALIISLPLLTILAN------FSAIIGASIVIWKYYDIPFAVF 297
                       + P +   ++ +PL  +L           ++G    I  Y  +  AV 
Sbjct: 122 FLTGYLGGALTSVVPFVICELLCVPLALVLGVGSGKVFLVMLVGVCSAIVGYLAVYAAVI 181

Query: 298 FSRFHSTATLANIFTGLI 315
            +   +      I   ++
Sbjct: 182 LAMMLTGRVFTGILMAIV 199


>gi|148977762|ref|ZP_01814318.1| putative anti-sigma B factor antagonist [Vibrionales bacterium
          SWAT-3]
 gi|145962976|gb|EDK28246.1| putative anti-sigma B factor antagonist [Vibrionales bacterium
          SWAT-3]
          Length = 102

 Score = 37.9 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 14/85 (16%)

Query: 14 NWKSPE------ISEIADDVVMAINK-----SIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           W++        + +I  D V AI +      I   S  +DLS I  +D+ G  ++++ +
Sbjct: 5  QWQALSSKEYQLLGDIDRDTVPAIWRILEKWQITESSVEIDLSHINRVDSAGMVMLIHLL 64

Query: 63 E---KYHGKIKLQGVSTHIEQLFSL 84
          E     +  I L  V   +  LF L
Sbjct: 65 EHAKNQNCHIMLSFVPEQLRTLFQL 89


>gi|169829728|ref|YP_001699886.1| anti-sigma-B factor antagonist [Lysinibacillus sphaericus C3-41]
 gi|168994216|gb|ACA41756.1| Anti-sigma-B factor antagonist (Anti-anti-sigma-B factor)
           [Lysinibacillus sphaericus C3-41]
          Length = 127

 Score = 37.9 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 3/69 (4%)

Query: 33  KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY---HGKIKLQGVSTHIEQLFSLISFTH 89
           K  +     +DLS +  +D+ G  + + F ++    +GK+KL G+ST +++LF +   + 
Sbjct: 55  KITEGMEIELDLSKVNYMDSTGLGIFVAFYKRTLRENGKVKLVGLSTRLQRLFEITGLSD 114

Query: 90  RKKIKNQKP 98
              I+  K 
Sbjct: 115 LMDIETDKK 123


>gi|21232130|ref|NP_638047.1| hypothetical protein XCC2699 [Xanthomonas campestris pv.
          campestris str. ATCC 33913]
 gi|66767741|ref|YP_242503.1| hypothetical protein XC_1415 [Xanthomonas campestris pv.
          campestris str. 8004]
 gi|188990858|ref|YP_001902868.1| Putative anti-anti-sigma factor [Xanthomonas campestris pv.
          campestris str. B100]
 gi|21113879|gb|AAM41971.1| conserved hypothetical protein [Xanthomonas campestris pv.
          campestris str. ATCC 33913]
 gi|66573073|gb|AAY48483.1| conserved hypothetical protein [Xanthomonas campestris pv.
          campestris str. 8004]
 gi|167732618|emb|CAP50812.1| Putative anti-anti-sigma factor [Xanthomonas campestris pv.
          campestris]
          Length = 109

 Score = 37.9 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 30/81 (37%), Gaps = 3/81 (3%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
                G       +E+   +  A+          +DL+A++EIDT G +L++   +   
Sbjct: 12 LTLALEGEMTIRRAAELKPLLQPALA---HPGGVRLDLAAVSEIDTTGLQLLLATKQAVQ 68

Query: 67 GKIKLQGVSTHIEQLFSLISF 87
             +   ++     +  +I  
Sbjct: 69 ADGRPFVLTDSSRAVVDVIEL 89


>gi|172035386|ref|YP_001801887.1| hypothetical protein cce_0470 [Cyanothece sp. ATCC 51142]
 gi|171696840|gb|ACB49821.1| hypothetical protein cce_0470 [Cyanothece sp. ATCC 51142]
          Length = 117

 Score = 37.9 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 4/91 (4%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62
           + V    G   +  I +  + +   +  +   D   VD+  +  ID+ G   I+      
Sbjct: 11  VAVLEPTGYITAANIDDFQEKLTNFVRNNPSRDYL-VDMHQVEFIDSAGLMAIVSAFRLA 69

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
           ++ + K+ +  +S  +  +F L       +I
Sbjct: 70  QRLNKKLSVCSLSPSVRIIFELTQLDRALEI 100


>gi|320330208|gb|EFW86193.1| STAS domain-containing protein [Pseudomonas syringae pv. glycinea
          str. race 4]
 gi|330880449|gb|EGH14598.1| STAS domain-containing protein [Pseudomonas syringae pv. glycinea
          str. race 4]
          Length = 96

 Score = 37.9 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 6/87 (6%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--- 58
          ++   T  +  G      ++E+A  ++  I  + +     VDLS +TE+D  G +L+   
Sbjct: 7  NQADATRVQIDGELTIYTVTELAARLLPQITGAAR---VEVDLSQVTEMDGAGLQLLAVI 63

Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLI 85
               K    + + G S  + + F L 
Sbjct: 64 QREAGKTGTSLHMTGQSKAVTETFELC 90


>gi|313669178|ref|YP_004049462.1| hypothetical protein NLA_19050 [Neisseria lactamica ST-640]
 gi|313006640|emb|CBN88106.1| hypothetical protein NLA_19050 [Neisseria lactamica 020-06]
          Length = 83

 Score = 37.9 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 27/77 (35%), Gaps = 2/77 (2%)

Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
             G+     ++E  D+      +    ++  VD   +   D+    L++  + +    I
Sbjct: 2  HIGGDITVKTLTE--DEFERFRQQCRLKETIAVDFGGVKRADSACVSLLLEILRRRKDSI 59

Query: 70 KLQGVSTHIEQLFSLIS 86
           L G+   +  L  L  
Sbjct: 60 GLTGIPESVRALSELYE 76


>gi|242277488|ref|YP_002989617.1| anti-sigma-factor antagonist [Desulfovibrio salexigens DSM 2638]
 gi|242120382|gb|ACS78078.1| anti-sigma-factor antagonist [Desulfovibrio salexigens DSM 2638]
          Length = 102

 Score = 37.9 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 37/82 (45%), Gaps = 5/82 (6%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG-AEL--IMYFMEK 64
          + + +G        ++ + +   + ++  S    VDLS +  +D+ G A L  +   + K
Sbjct: 15 LIKISGEVDFTGTPDLREKMHAFVKQT--SGEVRVDLSELEYLDSSGLASLIELRRILNK 72

Query: 65 YHGKIKLQGVSTHIEQLFSLIS 86
              +K+  V+  +++L +L  
Sbjct: 73 DSRSVKIIAVTDQVDRLLNLTQ 94


>gi|294632658|ref|ZP_06711218.1| conserved hypothetical protein [Streptomyces sp. e14]
 gi|292835991|gb|EFF94340.1| conserved hypothetical protein [Streptomyces sp. e14]
          Length = 144

 Score = 37.9 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 32/114 (28%), Gaps = 11/114 (9%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G  V  F G         I   +     +  +    ++DLS +   D  G  L+     +
Sbjct: 37  GHIVLEFRGEIDIAAAERITPFLDRVTGR--REARVVIDLSGVDFFDCSGLRLLYRARAR 94

Query: 65  Y---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIG 115
                G+++L        ++  +             P R     + +      G
Sbjct: 95  LLDREGELRLVCTHPLTLRVLKVTGLARLL------PPRPTLEAALERPQARSG 142


>gi|319945234|ref|ZP_08019496.1| hypothetical protein HMPREF0551_2344 [Lautropia mirabilis ATCC
           51599]
 gi|319741804|gb|EFV94229.1| hypothetical protein HMPREF0551_2344 [Lautropia mirabilis ATCC
           51599]
          Length = 418

 Score = 37.9 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 34/79 (43%), Gaps = 4/79 (5%)

Query: 21  SEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEKYHGKIKLQGVSTH 77
           +++            +     VD S +T ID IGA+L++       K   ++ + GV   
Sbjct: 185 AQVVKQTEQMTRAIQRKRQLRVDFSRVTSIDMIGADLLLRTFRDFRKARHELTICGV-EA 243

Query: 78  IEQLFSLISFTHRKKIKNQ 96
           +E+  S+++ + R+     
Sbjct: 244 LEKALSVMTESGRRDPDEH 262


>gi|83590341|ref|YP_430350.1| anti-sigma-factor antagonist domain-containing protein [Moorella
          thermoacetica ATCC 39073]
 gi|83573255|gb|ABC19807.1| anti-sigma-factor antagonist (STAS) domain protein [Moorella
          thermoacetica ATCC 39073]
          Length = 113

 Score = 37.9 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 37/85 (43%), Gaps = 4/85 (4%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
          E      R  G        ++  ++  +++   + +  ++DL+ +T +D+ G  +I+   
Sbjct: 8  EGKELQARIKGEVDLETADQLRQELEASLD-HARPEVLLLDLAGVTFMDSSGLGVILGRY 66

Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSL 84
            ++K  G+I L      + +L  L
Sbjct: 67 RRLQKKGGRIILYRPQPQVRRLLEL 91


>gi|127514228|ref|YP_001095425.1| anti-sigma-factor antagonist [Shewanella loihica PV-4]
 gi|126639523|gb|ABO25166.1| anti-sigma-factor antagonist [Shewanella loihica PV-4]
          Length = 97

 Score = 37.9 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 11/84 (13%), Positives = 33/84 (39%), Gaps = 7/84 (8%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EKY 65
           + +G      + E+   +   ++ +       +DL+ ++  D+ G  L+++ +   +K 
Sbjct: 11 CQVSGELSQAAVVELWPKLETLLDGACDR----LDLAGVSYSDSAGVALLLHLVAEQQKK 66

Query: 66 HGKIKLQGVSTHIEQLFSLISFTH 89
             + L      +++L  L     
Sbjct: 67 GQSLVLCNPPAQLQKLIDLYDLQD 90


>gi|94969770|ref|YP_591818.1| anti-sigma-factor antagonist [Candidatus Koribacter versatilis
          Ellin345]
 gi|94551820|gb|ABF41744.1| anti-sigma-factor antagonist [Candidatus Koribacter versatilis
          Ellin345]
          Length = 116

 Score = 37.9 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 6/83 (7%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          +  + V R  G        E+   V   I+ S      ++D + +T +D+ G   I+  +
Sbjct: 17 DAAVPVVRCTGRLVLGLTDELLLPVKQLISAS---KRIVLDFTELTRMDSSGLGTIVRLL 73

Query: 63 ---EKYHGKIKLQGVSTHIEQLF 82
             +     ++L+ V   I QL 
Sbjct: 74 VTAKAAGCSLELKNVGPPIRQLL 96


>gi|56459518|ref|YP_154799.1| STAS domain-containing protein [Idiomarina loihiensis L2TR]
 gi|56178528|gb|AAV81250.1| STAS domain [Idiomarina loihiensis L2TR]
          Length = 97

 Score = 37.9 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 29/80 (36%), Gaps = 7/80 (8%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEK 64
             F+G+     ++++                  VDL+ +  IDT G   ++     +  
Sbjct: 12 TLVFSGSLTRHSVAKLWSQR----KSWSVGSETRVDLTDVEVIDTAGVAFLLEILKLVGD 67

Query: 65 YHGKIKLQGVSTHIEQLFSL 84
            G +   G S  ++Q+  +
Sbjct: 68 GKGPLTCIGASEQLKQIARV 87


>gi|109896885|ref|YP_660140.1| anti-sigma-factor antagonist [Pseudoalteromonas atlantica T6c]
 gi|109699166|gb|ABG39086.1| anti-sigma-factor antagonist [Pseudoalteromonas atlantica T6c]
          Length = 110

 Score = 37.9 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 3/81 (3%)

Query: 11  FAGNWKSPEISEIADDVVMAINKSIQS-DSAIVDLSAITEIDTIG-AELIMYFMEKYHGK 68
            +GN     I     D +  +  + ++    +++L  IT+IDT G A LI    +     
Sbjct: 23  LSGNLNRDTIPNFWPDSLQQLTNAKRTNKPLVLNLEKITQIDTAGLAWLINLIRDAKKQD 82

Query: 69  IKLQGVSTHIEQLFSLISFTH 89
           I+   ++   + L +L   + 
Sbjct: 83  IEFSLLNP-PDTLLNLAKISD 102


>gi|67463658|pdb|1T6R|A Chain A, Solution Structure Of Tm1442, A Putative Anti Sigma
          Factor Antagonist In Phosphorylated State
          Length = 110

 Score = 37.9 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 42/89 (47%), Gaps = 1/89 (1%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          + ++   + R  G+  +   SE+ + +   I+ + +    ++DLS+++ +D  G   ++ 
Sbjct: 9  VEQDDKAIVRVQGDIDAYNSSELKEQLRNFISTTSK-KKIVLDLSSVSYMDXAGLGTLVV 67

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
           ++      K   +S+  E +  ++  TH
Sbjct: 68 ILKDAKINGKEFILSSLKESISRILKLTH 96


>gi|58581094|ref|YP_200110.1| hypothetical protein XOO1471 [Xanthomonas oryzae pv. oryzae
          KACC10331]
 gi|84623029|ref|YP_450401.1| hypothetical protein XOO_1372 [Xanthomonas oryzae pv. oryzae MAFF
          311018]
 gi|166711349|ref|ZP_02242556.1| hypothetical protein Xoryp_07750 [Xanthomonas oryzae pv.
          oryzicola BLS256]
 gi|188575613|ref|YP_001912542.1| stas domain, putative [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|58425688|gb|AAW74725.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
          KACC10331]
 gi|84366969|dbj|BAE68127.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
          MAFF 311018]
 gi|188520065|gb|ACD58010.1| stas domain, putative [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 109

 Score = 37.9 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 30/81 (37%), Gaps = 3/81 (3%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
                G       +E+   +  A+   +      +DL A++EIDT G +L++   +   
Sbjct: 12 LTLALEGEMTIRRAAELKPLLQPAL---LHPGGLHLDLGAVSEIDTTGLQLLLATKQAIQ 68

Query: 67 GKIKLQGVSTHIEQLFSLISF 87
             +   ++     +  +I  
Sbjct: 69 ADGRPFSLTDSSRAVVDVIEL 89


>gi|328876289|gb|EGG24652.1| ABC transporter A family protein [Dictyostelium fasciculatum]
          Length = 1702

 Score = 37.5 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 35/86 (40%), Gaps = 10/86 (11%)

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           MKI E    +R MG++      S    +LII+LP+  ++       G++IV    +    
Sbjct: 344 MKIRE---GMRMMGMNETAYFTSWIATSLIIALPITILIIIVVK--GSAIVYHTGWGSVL 398

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFM 320
            +F     +      +  G I + F 
Sbjct: 399 LLFIFYLFTL-----LLLGFIASLFF 419


>gi|108797387|ref|YP_637584.1| anti-sigma-factor antagonist [Mycobacterium sp. MCS]
 gi|119866471|ref|YP_936423.1| anti-sigma-factor antagonist [Mycobacterium sp. KMS]
 gi|108767806|gb|ABG06528.1| anti-sigma-factor antagonist [Mycobacterium sp. MCS]
 gi|119692560|gb|ABL89633.1| anti-sigma-factor antagonist [Mycobacterium sp. KMS]
          Length = 113

 Score = 37.5 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 5/91 (5%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--- 58
          +++G+ V R  G         +   +   ++    S   +VDLSA   ID+ G   +   
Sbjct: 9  TDSGVLVIRPEGRLNMVAAPALRKQIHELVD--GGSARVVVDLSATEFIDSSGLGALISG 66

Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
          +    +  G +++   +  +  +  L +   
Sbjct: 67 LKVARQAGGDLRIAAPTRQVTTVLELTNLNR 97


>gi|195113899|ref|XP_002001505.1| GI10832 [Drosophila mojavensis]
 gi|193918099|gb|EDW16966.1| GI10832 [Drosophila mojavensis]
          Length = 787

 Score = 37.5 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 38/127 (29%), Gaps = 13/127 (10%)

Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
                L  +    T+++ A  +  +    I      E++D     G D +         A
Sbjct: 179 TYYASLLNMSPATTSLITAAAATKSYNDSI---LRWEQLDGSVDFGFDPLYRHS----LA 231

Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIP-FAVFFSRFHSTATLANIFTGLIKAPFMA 321
           + I   +  I+     +IG S VI      P      + F     +A+I           
Sbjct: 232 MSIVYCVAYIVVFVVGLIGNSFVIAVVLRAPRMRTVTNYFIVNLAIADILV-----IVFC 286

Query: 322 CAIGIVA 328
               ++ 
Sbjct: 287 LPATLIG 293


>gi|111020564|ref|YP_703536.1| anti-sigma factor antagonist, RsbV [Rhodococcus jostii RHA1]
 gi|110820094|gb|ABG95378.1| anti-sigma factor antagonist, possible RsbV [Rhodococcus jostii
          RHA1]
          Length = 112

 Score = 37.5 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 37/91 (40%), Gaps = 5/91 (5%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--- 58
          ++ G+ V R AG         + + +   ++        +VDLSA   ID+ G   +   
Sbjct: 9  TDEGVAVVRPAGRLNMVAAPRLRELLRDVVDGGTTC--VVVDLSATDFIDSSGLGALIAG 66

Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
          +    +  G +++   +  +E + +L +   
Sbjct: 67 LKAARQAGGDLRIAQPTEQVETVLALTNLNR 97


>gi|59802418|ref|YP_209130.1| hypothetical protein NGO2120 [Neisseria gonorrhoeae FA 1090]
 gi|240013252|ref|ZP_04720165.1| hypothetical protein NgonD_01145 [Neisseria gonorrhoeae DGI18]
 gi|240015699|ref|ZP_04722239.1| hypothetical protein NgonFA_00778 [Neisseria gonorrhoeae FA6140]
 gi|240112042|ref|ZP_04726532.1| hypothetical protein NgonM_00390 [Neisseria gonorrhoeae MS11]
 gi|240114789|ref|ZP_04728851.1| hypothetical protein NgonPID1_00788 [Neisseria gonorrhoeae PID18]
 gi|240120324|ref|ZP_04733286.1| hypothetical protein NgonPI_00825 [Neisseria gonorrhoeae PID24-1]
 gi|240124815|ref|ZP_04737701.1| hypothetical protein NgonSK_01085 [Neisseria gonorrhoeae
          SK-92-679]
 gi|254492851|ref|ZP_05106022.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|260441398|ref|ZP_05795214.1| hypothetical protein NgonDG_10010 [Neisseria gonorrhoeae DGI2]
 gi|268598100|ref|ZP_06132267.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268600443|ref|ZP_06134610.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|268683394|ref|ZP_06150256.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|293397852|ref|ZP_06642058.1| hypothetical protein NGNG_00846 [Neisseria gonorrhoeae F62]
 gi|59719313|gb|AAW90718.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
 gi|226511891|gb|EEH61236.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|268582231|gb|EEZ46907.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268584574|gb|EEZ49250.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|268623678|gb|EEZ56078.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|291611798|gb|EFF40867.1| hypothetical protein NGNG_00846 [Neisseria gonorrhoeae F62]
          Length = 92

 Score = 37.5 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 26/80 (32%), Gaps = 4/80 (5%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFMEKYH 66
               G+     ++    D      +  +    I VD   +   D+    L++  +    
Sbjct: 9  TLHIGGDITVKTLT---GDAFGRFRQQCRLKETIAVDFGGVKRADSACMSLLLEVLRGCK 65

Query: 67 GKIKLQGVSTHIEQLFSLIS 86
          G ++L G+   +  L  L  
Sbjct: 66 GSVRLTGIPESVRALSELYE 85


>gi|289664636|ref|ZP_06486217.1| putative anti-anti-sigma factor [Xanthomonas campestris pv.
          vasculorum NCPPB702]
 gi|289667200|ref|ZP_06488275.1| putative anti-anti-sigma factor [Xanthomonas campestris pv.
          musacearum NCPPB4381]
          Length = 109

 Score = 37.5 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 30/81 (37%), Gaps = 3/81 (3%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
                G       +E+   +  A+   +      +DL A++EIDT G +L++   +   
Sbjct: 12 LTLALEGEMTIRRAAELKPLLQPAL---LHPGGLHLDLGAVSEIDTTGLQLLLATKQAIQ 68

Query: 67 GKIKLQGVSTHIEQLFSLISF 87
             +   ++     +  +I  
Sbjct: 69 ADGRPFSLTDSSRAVVDVIEL 89


>gi|320538925|ref|ZP_08038601.1| putative conserved hypothetical protein [Serratia symbiotica str.
          Tucson]
 gi|320031085|gb|EFW13088.1| putative conserved hypothetical protein [Serratia symbiotica str.
          Tucson]
          Length = 119

 Score = 37.5 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/85 (12%), Positives = 34/85 (40%), Gaps = 8/85 (9%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          E+ +      G      +  +          ++ +D   +D++ +  +D+ G  L+++  
Sbjct: 8  ESQLQTLILRGVLDRETLLPLWQQ-----RGALMADKTEIDVAQLQRVDSAGLALLVHLR 62

Query: 63 ---EKYHGKIKLQGVSTHIEQLFSL 84
              +   ++K+ G +  +  L +L
Sbjct: 63 AHQHQRGVELKISGATDRLRTLVAL 87


>gi|294138951|ref|YP_003554929.1| hypothetical protein SVI_0180 [Shewanella violacea DSS12]
 gi|293325420|dbj|BAJ00151.1| hypothetical protein [Shewanella violacea DSS12]
          Length = 104

 Score = 37.5 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 12/94 (12%), Positives = 28/94 (29%), Gaps = 6/94 (6%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFMEKY 65
           R         I  I   +   +      +   +D S ++ +DT GA+L+          
Sbjct: 6  IRLDSELTIRNIQPIFTQLSALLT---HDEELHIDASQLSRVDTAGAQLLYLFSRTCASR 62

Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
            K+        ++     +  +  +    + P 
Sbjct: 63 SLKVDWLNCRPELKANLENLGISIPEIAIQELPA 96


>gi|161506128|ref|YP_001573240.1| hypothetical protein SARI_04316 [Salmonella enterica subsp.
          arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160867475|gb|ABX24098.1| hypothetical protein SARI_04316 [Salmonella enterica subsp.
          arizonae serovar 62:z4,z23:--]
          Length = 98

 Score = 37.5 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 33/80 (41%), Gaps = 8/80 (10%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
              AG      ++ + D  V A+     +    +D+S I+ +DT G  L+ +     +K
Sbjct: 13 TLMLAGELDQDVLTPLWDARVEAM-----TGVTRIDMSQISRVDTGGLALLAHLVNQAKK 67

Query: 65 YHGKIKLQGVSTHIEQLFSL 84
              + L GV+  +  L  L
Sbjct: 68 QGNAVSLSGVNDKVYALAQL 87


>gi|224371179|ref|YP_002605343.1| RsbV [Desulfobacterium autotrophicum HRM2]
 gi|223693896|gb|ACN17179.1| RsbV [Desulfobacterium autotrophicum HRM2]
          Length = 113

 Score = 37.5 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 47/106 (44%), Gaps = 5/106 (4%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++ I VF+  G   S     + + + + ++K   S   ++D   +  I + G  +I+  M
Sbjct: 8   QDQIEVFKVKGRLDSNTSPLLEEQLNLCLDK--GSTRMVIDFEGLEYISSAGIRVILKTM 65

Query: 63  EKYH---GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105
           +K     GK+ L  +  +++++F +  F     ++  + +    + 
Sbjct: 66  KKLEHTQGKLVLCTLQDYVQEVFEIAGFDTYLTLEPTREKAIASWE 111


>gi|300787020|ref|YP_003767311.1| anti-anti-sigma factor [Amycolatopsis mediterranei U32]
 gi|299796534|gb|ADJ46909.1| anti-anti-sigma factor [Amycolatopsis mediterranei U32]
          Length = 114

 Score = 37.5 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 10/82 (12%), Positives = 25/82 (30%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          E G      AG+ +      +   V   +          +D   +   D+     ++  +
Sbjct: 13 EEGTARVTIAGDLEFATTGTLLRLVTDRLAACPGVREVRLDCGELGFCDSSELLKVLRVV 72

Query: 63 EKYHGKIKLQGVSTHIEQLFSL 84
               +++L       E+L + 
Sbjct: 73 ADAGARLRLDHRRAAPERLLTR 94


>gi|119776209|ref|YP_928949.1| SpoIIAA family protein [Shewanella amazonensis SB2B]
 gi|119768709|gb|ABM01280.1| SpoIIAA family protein [Shewanella amazonensis SB2B]
          Length = 96

 Score = 37.5 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 10/67 (14%), Positives = 31/67 (46%)

Query: 21 SEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQ 80
          + +   +   +   + +D++ +DL  ++  D+ G   ++   ++ H + +   + +   Q
Sbjct: 19 AAVVKQLWPEVATLVPADTSCLDLRQLSYSDSAGVAFLLELWQRAHSRGQSITLMSPSPQ 78

Query: 81 LFSLISF 87
          L  LI+ 
Sbjct: 79 LGKLIAL 85


>gi|83309678|ref|YP_419942.1| anti-anti-sigma regulatory factor [Magnetospirillum magneticum
           AMB-1]
 gi|82944519|dbj|BAE49383.1| Anti-anti-sigma regulatory factor [Magnetospirillum magneticum
           AMB-1]
          Length = 132

 Score = 37.5 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 38/85 (44%), Gaps = 5/85 (5%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++     R  G            + +++   SI++   +VDL+ +  +D++G  ++    
Sbjct: 40  QDDTLTVRLDG--TMDYTVTSQMNSLISDIGSIKAARVVVDLTKVARVDSVGLGMLHLAK 97

Query: 63  EKY---HGKIKLQGVSTHIEQLFSL 84
           ++       + L+G S ++ +LF L
Sbjct: 98  DEIVSNGRHLTLRGASGNVRRLFEL 122


>gi|77166235|ref|YP_344760.1| Sulfate transporter/antisigma-factor antagonist STAS
          [Nitrosococcus oceani ATCC 19707]
 gi|254435658|ref|ZP_05049165.1| hypothetical protein NOC27_2721 [Nitrosococcus oceani AFC27]
 gi|76884549|gb|ABA59230.1| Sulfate transporter/antisigma-factor antagonist STAS
          [Nitrosococcus oceani ATCC 19707]
 gi|207088769|gb|EDZ66041.1| hypothetical protein NOC27_2721 [Nitrosococcus oceani AFC27]
          Length = 123

 Score = 37.5 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 26/63 (41%), Gaps = 2/63 (3%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +       FR  G      + E+A+  +   N++       +DL  ++  D+ G  L++ 
Sbjct: 5  IEPQQKGHFRIVGELTFNTVPEVAEKGLALFNEA--GADLRIDLREVSRTDSAGLALLIA 62

Query: 61 FME 63
          ++ 
Sbjct: 63 WLR 65


>gi|293391908|ref|ZP_06636242.1| anti-sigma factor B antagonist [Aggregatibacter
          actinomycetemcomitans D7S-1]
 gi|290952442|gb|EFE02561.1| anti-sigma factor B antagonist [Aggregatibacter
          actinomycetemcomitans D7S-1]
          Length = 89

 Score = 37.5 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 8/33 (24%), Positives = 16/33 (48%)

Query: 31 INKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          + +  ++     DLS +  ID+ G  L+  F+ 
Sbjct: 13 LARKTETLDVHWDLSQVNRIDSAGFALLCDFLR 45


>gi|269957911|ref|YP_003327700.1| anti-sigma-factor antagonist [Xylanimonas cellulosilytica DSM
           15894]
 gi|269306592|gb|ACZ32142.1| anti-sigma-factor antagonist [Xylanimonas cellulosilytica DSM
           15894]
          Length = 128

 Score = 37.5 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 27/79 (34%), Gaps = 3/79 (3%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
                 +G   +   +E+++   M+           +D   IT +D+ G   +     + 
Sbjct: 34  RARIVLSGEIDADIGAELSE---MSAEAEATGLPVEIDAHHITFMDSSGVAFLARLATRM 90

Query: 66  HGKIKLQGVSTHIEQLFSL 84
             K+++      +  L  +
Sbjct: 91  PQKVRILRAPPTVRFLLDV 109


>gi|329916013|ref|ZP_08276326.1| anti-sigma-factor antagonist (STAS) domain protein
          [Oxalobacteraceae bacterium IMCC9480]
 gi|327544812|gb|EGF30203.1| anti-sigma-factor antagonist (STAS) domain protein
          [Oxalobacteraceae bacterium IMCC9480]
          Length = 107

 Score = 37.5 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 33/86 (38%), Gaps = 6/86 (6%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
            V R  G        EI     + +    +     +DLS ++E+DT G +L+M   +  
Sbjct: 3  TRVLRIDGELTIYRADEIK---ALLLAALAEPSDLELDLSGVSELDTAGLQLLMLAKKTA 59

Query: 66 HG---KIKLQGVSTHIEQLFSLISFT 88
                + L   ST +  +F L+   
Sbjct: 60 LAGSHALHLVAHSTAVTGVFELLDLA 85


>gi|71906780|ref|YP_284367.1| Sulfate transporter/antisigma-factor antagonist STAS
          [Dechloromonas aromatica RCB]
 gi|71846401|gb|AAZ45897.1| Sulfate transporter/antisigma-factor antagonist STAS
          [Dechloromonas aromatica RCB]
          Length = 101

 Score = 37.5 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 36/79 (45%), Gaps = 3/79 (3%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
             + +       E+   ++ A+  +   +   ++L+ ++E+DT G +L++   ++    
Sbjct: 7  LVISDDLTIYHALELKPVLLNALAAT---NELELNLAQVSEMDTAGLQLLILLKKEAQKT 63

Query: 69 IKLQGVSTHIEQLFSLISF 87
           K   +  H + + S+I F
Sbjct: 64 GKCVRIVAHSQAVSSVIDF 82


>gi|171058218|ref|YP_001790567.1| anti-sigma-factor antagonist [Leptothrix cholodnii SP-6]
 gi|170775663|gb|ACB33802.1| anti-sigma-factor antagonist [Leptothrix cholodnii SP-6]
          Length = 110

 Score = 37.5 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 13/96 (13%), Positives = 32/96 (33%), Gaps = 4/96 (4%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEKY 65
           F   G       +E    ++ A+          +DL  I   D+ G +L++     +++ 
Sbjct: 12  FALGGELCIQTAAEQRQVLIDALG-QADGRDLALDLHEIHGCDSAGVQLLLATRLQLQRS 70

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
             ++ L+ +S  + ++                  R 
Sbjct: 71  GRRLHLEALSPVVREVLRTYGLQALFDSPPTPGDRR 106


>gi|108800291|ref|YP_640488.1| anti-sigma-factor antagonist [Mycobacterium sp. MCS]
 gi|119869419|ref|YP_939371.1| anti-sigma-factor antagonist [Mycobacterium sp. KMS]
 gi|126435914|ref|YP_001071605.1| anti-sigma-factor antagonist [Mycobacterium sp. JLS]
 gi|108770710|gb|ABG09432.1| anti-sigma-factor antagonist [Mycobacterium sp. MCS]
 gi|119695508|gb|ABL92581.1| anti-sigma-factor antagonist [Mycobacterium sp. KMS]
 gi|126235714|gb|ABN99114.1| anti-sigma-factor antagonist [Mycobacterium sp. JLS]
          Length = 126

 Score = 37.5 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 32/108 (29%), Gaps = 3/108 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTI---GAELI 58
           + +     R AG   +   SE  D     +  +    +  +D + +T  D+    G  LI
Sbjct: 9   AADRSATVRIAGELDAETTSEFVDTASRLLETNPGLRALRLDCADMTFCDSAGLSGLLLI 68

Query: 59  MYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106
                     + L    T+ E++  +         +      +     
Sbjct: 69  ERRTTAAGVDLHLDNRPTYFERVLDITGILEYIAGRRATSAPAPTEEP 116


>gi|307718375|ref|YP_003873907.1| anti-anti-sigma factor [Spirochaeta thermophila DSM 6192]
 gi|306532100|gb|ADN01634.1| anti-anti-sigma factor [Spirochaeta thermophila DSM 6192]
          Length = 130

 Score = 37.5 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 36/115 (31%), Gaps = 5/115 (4%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61
           E    +   +G     +   I D +     +       + DL  +T ID+ G   ++Y  
Sbjct: 8   EKHSFILSLSGELDLYQAPRIKDMLQKVFPEH--PARIVFDLDGLTYIDSSGIGALLYAY 65

Query: 62  --MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI 114
              ++      L  +   ++++  L    H   I     +      S  +    +
Sbjct: 66  SEAKRRDIAFYLVNLHGSVKRVIELTKLLHYFPIAPSLEEALHEEESSADPSEEM 120


>gi|296130799|ref|YP_003638049.1| anti-sigma-factor antagonist [Cellulomonas flavigena DSM 20109]
 gi|296022614|gb|ADG75850.1| anti-sigma-factor antagonist [Cellulomonas flavigena DSM 20109]
          Length = 139

 Score = 37.5 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 28/79 (35%), Gaps = 3/79 (3%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
            T    +G   +    E+ +    A  + +      VD   +T +D+ G   +     + 
Sbjct: 38  RTRIVLSGEVDADLGPELQEATAEAEERGL---PIEVDAHHVTFMDSSGVAFLARLSIRS 94

Query: 66  HGKIKLQGVSTHIEQLFSL 84
             +++L  V   +  L  +
Sbjct: 95  EHRVRLLRVPPTVRFLLEV 113


>gi|167750691|ref|ZP_02422818.1| hypothetical protein EUBSIR_01669 [Eubacterium siraeum DSM 15702]
 gi|167656370|gb|EDS00500.1| hypothetical protein EUBSIR_01669 [Eubacterium siraeum DSM 15702]
          Length = 137

 Score = 37.5 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 39/90 (43%), Gaps = 4/90 (4%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
            NG      +G     E S I   +   + + + S   I+D+S ++ +D+ G  LI+   
Sbjct: 37  RNGGITAVISGEIGHFEASGIRIRIDAELERLMPS-MLILDMSGVSFMDSSGIGLILGRQ 95

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
             ME + G + ++  S  + ++  +   + 
Sbjct: 96  RIMESFGGGVAVKNPSPSVRRIIQVAGLSR 125


>gi|197117437|ref|YP_002137864.1| hypothetical protein Gbem_1047 [Geobacter bemidjiensis Bem]
 gi|197086797|gb|ACH38068.1| conserved hypothetical protein [Geobacter bemidjiensis Bem]
          Length = 105

 Score = 37.5 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 35/82 (42%), Gaps = 6/82 (7%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDS--AIVDLSAITEIDTIGAELIMYFMEKY 65
             F G+    E +E+   +V  + + ++  +  A +DL  +  ID  G +L+  F+E  
Sbjct: 11 HITFQGSCSREEAAELHRALVCRLTELVERKAEQAELDLRQVDRIDACGCQLLALFLEDL 70

Query: 66 HGKIKLQGVSTHIEQLFSLISF 87
                 G++    QL   ++ 
Sbjct: 71 RRH----GITPAACQLGPELAA 88


>gi|72163163|ref|YP_290820.1| anti-sigma factor antagonist [Thermobifida fusca YX]
 gi|71916895|gb|AAZ56797.1| anti-sigma factor antagonist [Thermobifida fusca YX]
          Length = 122

 Score = 37.5 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 39/108 (36%), Gaps = 5/108 (4%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
           EN   +    G+       ++   V  A++        I+D SA+  +D+ G   I+   
Sbjct: 11  ENRSVIVSVEGDLDIATAGDLRSAVQSAVDAH--GPWLILDFSALDFMDSSGLNAIIHAY 68

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF 107
           + + +  G + L   +  + ++  L+    +  +     +      + 
Sbjct: 69  HLVRERGGSLALAAPNERVTKVIRLVGLHRQLPVHRTVAEAVAAMRAL 116


>gi|271961736|ref|YP_003335932.1| anti-sigma F factor antagonist [Streptosporangium roseum DSM 43021]
 gi|270504911|gb|ACZ83189.1| anti-sigma F factor antagonist [Streptosporangium roseum DSM 43021]
          Length = 117

 Score = 37.5 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 13/108 (12%), Positives = 37/108 (34%), Gaps = 4/108 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S  G TV    G         +  +    + +S  +   ++D+S +   D+ G  +++  
Sbjct: 9   SHAGHTVMTIVGEIDLYTAPGLQSEFTRLLQESPTT-YVVIDMSGVEFCDSTGMNVLLSA 67

Query: 62  MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106
           +++     G ++L      + ++  +        +    P +      
Sbjct: 68  LKRLKERGGTLELAAPRPAVRKILQVTGLDSVFTVHEAVPGKLLTAEP 115


>gi|239787369|emb|CAX83845.1| Anti-sigma factor antagonist [uncultured bacterium]
          Length = 108

 Score = 37.5 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 32/91 (35%), Gaps = 6/91 (6%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           + G  V    G         +   ++ +++        +VD+S ++ ID+ G   ++  
Sbjct: 7  EDRGFLVMTLDGEADLQHTPTLRKMLLESVS---GGKPVVVDMSNVSYIDSSGVASLVEA 63

Query: 62 MEKYHGK---IKLQGVSTHIEQLFSLISFTH 89
           +    K     L G+S    ++  L     
Sbjct: 64 YQSARKKGFSFALAGLSPAALRVLQLARLDR 94


>gi|238064434|ref|ZP_04609143.1| hypothetical protein MCAG_05400 [Micromonospora sp. ATCC 39149]
 gi|237886245|gb|EEP75073.1| hypothetical protein MCAG_05400 [Micromonospora sp. ATCC 39149]
          Length = 135

 Score = 37.5 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 14/115 (12%), Positives = 42/115 (36%), Gaps = 5/115 (4%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI-- 58
           +S+    + R  G+      + +  +V   + +  +    ++D + +  ID+ G  +I  
Sbjct: 21  LSDPDAPLIRVGGDLAFTTAAPLRREVDRQLAE--RPSVLVLDFAGLRFIDSTGLSVIVH 78

Query: 59  -MYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHY 112
                ++    I+L+     ++ +  +   T          +RS+  +  +    
Sbjct: 79  AWREGQQCDTAIRLRSTPRFLDTILDMTGVTGLLARPLPDGERSYGASGSRRPAA 133


>gi|331694199|ref|YP_004330438.1| sulfate transporter/antisigma-factor antagonist STAS
          [Pseudonocardia dioxanivorans CB1190]
 gi|326948888|gb|AEA22585.1| Sulfate transporter/antisigma-factor antagonist STAS
          [Pseudonocardia dioxanivorans CB1190]
          Length = 139

 Score = 37.5 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 21/56 (37%), Gaps = 1/56 (1%)

Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
           +G      +  + + +V    +     + I+DL+ I   DT G E +     +  
Sbjct: 26 LSGR-TGSRLVRLVERLVEDTPRPAGPGALIIDLAQIRRFDTDGVEALHRAFGRAG 80


>gi|310766234|gb|ADP11184.1| Anti-sigma B factor antagonist [Erwinia sp. Ejp617]
          Length = 98

 Score = 37.5 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 32/79 (40%), Gaps = 8/79 (10%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---KY 65
           R  G  +   +  +         +++      +D+SA+  +D+ G  L+++  +     
Sbjct: 14 LRLIGELERETLLPLWQQ-----REAVMERVETIDVSALERVDSGGLALLVHLRQIAIDN 68

Query: 66 HGKIKLQGVSTHIEQLFSL 84
            K +  GV+  +  L +L
Sbjct: 69 GRKPRFSGVTDKLNSLITL 87


>gi|256833012|ref|YP_003161739.1| arginyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
 gi|256686543|gb|ACV09436.1| arginyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
          Length = 558

 Score = 37.5 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 51/150 (34%), Gaps = 17/150 (11%)

Query: 13  GNW---KSPEISEIADDVVMAINKSI------QSDSAIVDLSA-----ITEIDTIGAELI 58
           G+W    + ++++ A      +  ++      Q+  A VD++      IT +DT  A  +
Sbjct: 45  GDWATNVALQLAKKAGQPPRVLADALAARLQEQAGIARVDVAGPGFLNIT-LDTAAAGEL 103

Query: 59  MYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
              + +  G+     V          +S      I     + +   +S   +    G  +
Sbjct: 104 ARTIVEAGGEYGRSAVRAGRTINLEFVSANPTGPIHIGGTRWAAVGDSLARILQATGAHV 163

Query: 119 VK--FINDSCSQAHILGLVISNTGEFCASS 146
           VK  + ND  +Q       +  + +     
Sbjct: 164 VKEYYFNDHGAQIDRFARSLVASAQGLPVP 193


>gi|77165087|ref|YP_343612.1| Sulfate transporter/antisigma-factor antagonist STAS
          [Nitrosococcus oceani ATCC 19707]
 gi|254433230|ref|ZP_05046738.1| STAS domain protein [Nitrosococcus oceani AFC27]
 gi|76883401|gb|ABA58082.1| Sulfate transporter/antisigma-factor antagonist STAS
          [Nitrosococcus oceani ATCC 19707]
 gi|207089563|gb|EDZ66834.1| STAS domain protein [Nitrosococcus oceani AFC27]
          Length = 170

 Score = 37.5 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 30/70 (42%), Gaps = 1/70 (1%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +G+ V R  G+ + P +S   D  +  +   +     +VDL+    ID+    L++   
Sbjct: 11 HDGVHVLRLLGDMRYP-LSPSLDHFLQRLFSEVTPQGFVVDLTDTRSIDSTNLGLLVRIA 69

Query: 63 EKYHGKIKLQ 72
          +    + + +
Sbjct: 70 KLMQRRGQPR 79


>gi|23014474|ref|ZP_00054288.1| COG1366: Anti-anti-sigma regulatory factor (antagonist of
          anti-sigma factor) [Magnetospirillum magnetotacticum
          MS-1]
          Length = 103

 Score = 37.5 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 41/91 (45%), Gaps = 6/91 (6%)

Query: 1  MSENG-ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
          +S NG +   + +G++   E   +A   V+    S  + S  VDL+ I  +D+    +++
Sbjct: 7  LSRNGNVLTIKLSGDFSFSE--NMAFRTVVDAVVSSGASSVEVDLTGIGSLDSAALSMLI 64

Query: 60 YFMEKY---HGKIKLQGVSTHIEQLFSLISF 87
             E+     G + L      ++++  ++ F
Sbjct: 65 LLRERLAKAGGTLTLVKPPPQVDRILEVVDF 95


>gi|21245055|ref|NP_644637.1| hypothetical protein XAC4343 [Xanthomonas axonopodis pv. citri
          str. 306]
 gi|21110786|gb|AAM39173.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
          str. 306]
          Length = 96

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 9/90 (10%), Positives = 32/90 (35%), Gaps = 7/90 (7%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66
               G      ++      +  ++      +  +DLS +  +D+ G  ++     +   
Sbjct: 12 TLVITGVLDRAAVTAAWPQAIAQLD-----GARALDLSGVQRLDSAGVAMLAELAARLRQ 66

Query: 67 -GKIKLQGVSTHIEQLFSLISFTHRKKIKN 95
           G  ++ G ++ +++L +    +     + 
Sbjct: 67 AGSGEVVGEASGLDELRAAYRLSPTLDFQA 96


>gi|31793156|ref|NP_855649.1| integral membrane protein YrbE3A [Mycobacterium bovis AF2122/97]
 gi|121637870|ref|YP_978093.1| integral membrane protein YrbE3a [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|224990354|ref|YP_002645041.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|260205254|ref|ZP_05772745.1| hypothetical integral membrane protein [Mycobacterium tuberculosis
           K85]
 gi|289574649|ref|ZP_06454876.1| integral membrane protein YrbE3a [Mycobacterium tuberculosis K85]
 gi|31618747|emb|CAD94701.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE3A
           [Mycobacterium bovis AF2122/97]
 gi|121493517|emb|CAL71991.1| Conserved hypothetical integral membrane protein yrbE3A
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|224773467|dbj|BAH26273.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|289539080|gb|EFD43658.1| integral membrane protein YrbE3a [Mycobacterium tuberculosis K85]
          Length = 134

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 12/94 (12%), Positives = 31/94 (32%), Gaps = 4/94 (4%)

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
           G+     +    +      + +  +       + ++ +LL    Q ++V        +L+
Sbjct: 10  GRVADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLL----QCWFVARVSTLPGVLM 65

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL 208
           +     +        L+  GA  FS    +I  +
Sbjct: 66  TIPWAVISGFLFNVLLTDIGAADFSGTGCAIFTV 99


>gi|256393986|ref|YP_003115550.1| anti-sigma-factor antagonist [Catenulispora acidiphila DSM 44928]
 gi|256360212|gb|ACU73709.1| anti-sigma-factor antagonist [Catenulispora acidiphila DSM 44928]
          Length = 118

 Score = 37.1 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 11/85 (12%), Positives = 32/85 (37%), Gaps = 3/85 (3%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
          G  V   AG+            +  + + S    +  +D SA+T +D++G  +++   ++
Sbjct: 12 GRVVVTLAGDVDLAAFRRFEAGLAQSWDGST---NLTIDCSAVTFLDSMGLRVLVRARQR 68

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89
               +   ++     +  ++    
Sbjct: 69 AADHDRDVTLAAPSRPVLRVLQLAE 93


>gi|325915570|ref|ZP_08177880.1| putative NTP binding protein (contains STAS domain) [Xanthomonas
          vesicatoria ATCC 35937]
 gi|325538208|gb|EGD09894.1| putative NTP binding protein (contains STAS domain) [Xanthomonas
          vesicatoria ATCC 35937]
          Length = 97

 Score = 37.1 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 8/90 (8%), Positives = 30/90 (33%), Gaps = 7/90 (7%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
               G      ++      +  ++         +DL+ +  +D+ G  ++     +  G
Sbjct: 13 TLALTGVLDRAAVTAAWPQAIAQLD-----GVRTLDLTGVQRLDSAGVAMLAELAARLRG 67

Query: 68 K--IKLQGVSTHIEQLFSLISFTHRKKIKN 95
               + G ++ +++L +    +     + 
Sbjct: 68 NGTAAVVGEASGLDELRAAYRLSPTLDFQA 97


>gi|256376432|ref|YP_003100092.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827]
 gi|255920735|gb|ACU36246.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827]
          Length = 118

 Score = 37.1 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 37/95 (38%), Gaps = 1/95 (1%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA-ELIMYFM 62
            G  V   +G      +  +  +++ A+ +    +  +VDL+ +    + G  EL+   +
Sbjct: 16  GGAVVLHVSGEIDQLTVEPLHRELLSALARVRPPEPVVVDLTEVGFFGSAGLNELVTGHL 75

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97
           +      +L  V+ H E L  L      +++    
Sbjct: 76  QAELLGTRLSVVAGHREVLRPLAISGLDEQLDVHP 110


>gi|126433008|ref|YP_001068699.1| anti-sigma-factor antagonist [Mycobacterium sp. JLS]
 gi|126232808|gb|ABN96208.1| anti-sigma-factor antagonist [Mycobacterium sp. JLS]
          Length = 113

 Score = 37.1 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 5/91 (5%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--- 58
          +++G+ V R  G         +   +   ++    S   +VDLSA   ID+ G   +   
Sbjct: 9  TDSGVLVIRPEGRLNMVAAPALRKQIHELVD--GGSTRVVVDLSATEFIDSSGLGALISG 66

Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
          +    +  G +++   +  +  +  L +   
Sbjct: 67 LKVARQAGGDLRIAAPTRQVTTVLELTNLNR 97


>gi|313202373|ref|YP_004041031.1| anti-sigma-factor antagonist [Methylovorus sp. MP688]
 gi|312441689|gb|ADQ85795.1| anti-sigma-factor antagonist [Methylovorus sp. MP688]
          Length = 96

 Score = 37.1 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 3/73 (4%)

Query: 19 EISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EKYHGKIKLQGVS 75
           I E A+     +    Q  +  +DL+ +TEIDT G +L++      ++    + + G S
Sbjct: 11 TIFEAAEYHAALLPPVTQCHTLELDLTNVTEIDTSGLQLLVSAKLRSQQTGSTLSITGHS 70

Query: 76 THIEQLFSLISFT 88
            ++Q+       
Sbjct: 71 ETVQQVLDATDLA 83


>gi|299538304|ref|ZP_07051589.1| anti-sigma-B factor antagonist [Lysinibacillus fusiformis ZC1]
 gi|298726506|gb|EFI67096.1| anti-sigma-B factor antagonist [Lysinibacillus fusiformis ZC1]
          Length = 110

 Score = 37.1 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 3/69 (4%)

Query: 33  KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY---HGKIKLQGVSTHIEQLFSLISFTH 89
           K  +     +DLS +  +D+ G  + + F ++    +GK+KL G+S  +++LF +   + 
Sbjct: 38  KITEGLEIELDLSKVNYMDSTGLGIFVAFYKRALRENGKVKLVGLSNRLQRLFEITGLSD 97

Query: 90  RKKIKNQKP 98
              I+  K 
Sbjct: 98  LMDIETDKK 106


>gi|119486322|ref|ZP_01620381.1| hypothetical protein L8106_16749 [Lyngbya sp. PCC 8106]
 gi|119456535|gb|EAW37665.1| hypothetical protein L8106_16749 [Lyngbya sp. PCC 8106]
          Length = 392

 Score = 37.1 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 58/138 (42%), Gaps = 23/138 (16%)

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF--SIDLM 203
           S++F  F LS++ + Y +     P +  +   T   ++    F L +  AE        M
Sbjct: 11  SFQFPSFYLSILDR-YIISELIAPFLFGVGLFTSVALSIDTVFDLVRKVAESGLDVGIAM 69

Query: 204 SILQLRE---------IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
            I  L+          + ++LT +++ GR           M  + EI A+R+ G+   R+
Sbjct: 70  QIFLLKMPEFVVLSFPMSMVLTTLIVYGR-----------MSSDSEIVALRSCGISIYRL 118

Query: 255 LISPRIWALIISLPLLTI 272
           +I   I++L I+  +   
Sbjct: 119 VIPTLIFSLFITASMFVF 136


>gi|307154202|ref|YP_003889586.1| anti-sigma-factor antagonist [Cyanothece sp. PCC 7822]
 gi|306984430|gb|ADN16311.1| anti-sigma-factor antagonist [Cyanothece sp. PCC 7822]
          Length = 118

 Score = 37.1 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 33/81 (40%), Gaps = 4/81 (4%)

Query: 16 KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFMEKYHGKIKLQ 72
           +  ISE  +++ +++  S      ++D++ +  +D+ G   +       EK   +  L 
Sbjct: 20 TAANISEFQEELTLSLT-SGDHSVFLIDMTKVEFLDSAGLMALASAFRLAEKLGKRFSLC 78

Query: 73 GVSTHIEQLFSLISFTHRKKI 93
           +   ++ +F L        I
Sbjct: 79 SIPPSVKIIFELTQLDRVLDI 99


>gi|323492705|ref|ZP_08097849.1| putative anti-sigma regulatory factor [Vibrio brasiliensis LMG
           20546]
 gi|323313080|gb|EGA66200.1| putative anti-sigma regulatory factor [Vibrio brasiliensis LMG
           20546]
          Length = 106

 Score = 37.1 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 34/92 (36%), Gaps = 4/92 (4%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY-- 65
                GN  +   S  A   +  I          +D S +  +D+ G   I+Y  ++   
Sbjct: 14  TLIINGNLDADG-SRSAQPHIDQIIAEDSGRDVEIDFSQVQFLDSSGVGAIVYLYKRLIE 72

Query: 66  -HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96
               ++++ VS    ++ +L+  +    + + 
Sbjct: 73  RQRSMRIENVSGQPLEIINLLRISQAIPVNSH 104


>gi|259907022|ref|YP_002647378.1| Anti-sigma B factor antagonist [Erwinia pyrifoliae Ep1/96]
 gi|224962644|emb|CAX54099.1| Anti-sigma B factor antagonist [Erwinia pyrifoliae Ep1/96]
 gi|283476817|emb|CAY72655.1| Uncharacterized protein yrbB [Erwinia pyrifoliae DSM 12163]
          Length = 98

 Score = 37.1 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 32/79 (40%), Gaps = 8/79 (10%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---KY 65
           R  G  +   +  +         +++      +D+SA+  +D+ G  L+++  +     
Sbjct: 14 LRLIGELERETLLPLWQQ-----REAVMERVETIDVSALERVDSGGLALLVHLRQIAIDN 68

Query: 66 HGKIKLQGVSTHIEQLFSL 84
            K +  GV+  +  L +L
Sbjct: 69 GRKPRFSGVTDKLNSLITL 87


>gi|183220963|ref|YP_001838959.1| putative anti-sigma factor antagonist [Leptospira biflexa serovar
          Patoc strain 'Patoc 1 (Paris)']
 gi|189911058|ref|YP_001962613.1| antagonist of anti-sigma factor [Leptospira biflexa serovar Patoc
          strain 'Patoc 1 (Ames)']
 gi|167775734|gb|ABZ94035.1| Antagonist of anti-sigma factor [Leptospira biflexa serovar Patoc
          strain 'Patoc 1 (Ames)']
 gi|167779385|gb|ABZ97683.1| Putative anti-sigma factor antagonist [Leptospira biflexa serovar
          Patoc strain 'Patoc 1 (Paris)']
          Length = 113

 Score = 37.1 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 36/81 (44%), Gaps = 5/81 (6%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MYFMEK 64
          +    GN       +I  D++  ++ S    S I +LS +  I + G  L+   +   ++
Sbjct: 18 IVHVQGNLDVHNTHKIEKDLLTLVSSS--GKSVIFNLSEVPFISSAGLRLLVTTLRHCQE 75

Query: 65 YHGKIKLQGVSTHIEQLFSLI 85
              I + G+   +E++F +I
Sbjct: 76 QKISIAICGLQPAVEKVFDII 96


>gi|86739156|ref|YP_479556.1| anti-sigma-factor antagonist domain-containing protein [Frankia
          sp. CcI3]
 gi|86566018|gb|ABD09827.1| anti-sigma-factor antagonist (STAS) domain protein [Frankia sp.
          CcI3]
          Length = 115

 Score = 37.1 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 39/85 (45%), Gaps = 5/85 (5%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +++    V   AG+     +  + + ++ A  +       IVDL  ++ +D+ G  +I++
Sbjct: 5  VTDRDAIVVHPAGDIDYSSLDPLREALLDA--RVAGVKEIIVDLEQVSFLDSQGLAVILF 62

Query: 61 FMEK---YHGKIKLQGVSTHIEQLF 82
            ++     G++ L+ ++    +L 
Sbjct: 63 AHQRQRSAGGRLVLRNLNEDAYRLL 87


>gi|21233048|ref|NP_638965.1| anti-sigma F factor antagonist [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66766921|ref|YP_241683.1| anti-sigma F factor antagonist [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|188989994|ref|YP_001902004.1| anti-anti-sigma factor [Xanthomonas campestris pv. campestris str.
           B100]
 gi|21114898|gb|AAM42889.1| anti-sigma F factor antagonist [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66572253|gb|AAY47663.1| anti-sigma F factor antagonist [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167731754|emb|CAP49934.1| anti-anti-sigma factor [Xanthomonas campestris pv. campestris]
          Length = 139

 Score = 37.1 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/110 (10%), Positives = 40/110 (36%), Gaps = 5/110 (4%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---M 59
           ++       +G   +    ++ + +   +   I   + ++DL+ +  I + G   I    
Sbjct: 12  QDTRQRVTLSGRLDTHTFHDLDEALSPLLATPIT--TLVLDLADLEYISSAGIRSIFKAR 69

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
             +   HGK+ +      I ++F ++       +     +   + ++ + 
Sbjct: 70  KALATRHGKVLVAHPQPQIRKVFDMVKAVPLSDVFASTEELDAYLSTMQR 119


>gi|313664913|ref|YP_004046784.1| efflux ABC transporter, permease protein [Mycoplasma leachii PG50]
 gi|312949258|gb|ADR23854.1| efflux ABC transporter, permease protein [Mycoplasma leachii PG50]
          Length = 1798

 Score = 37.1 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 58/159 (36%), Gaps = 20/159 (12%)

Query: 184 QQGAFQLSQFGAEIFSIDLM---SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK---- 236
            Q  +Q  +F    +S++      I     +   LTA +IA    SA+   +G +K    
Sbjct: 636 IQTFYQEHKFSNSWYSLNWTLYQKIAFWYSLATFLTASLIALV--SALAVFVGVIKSIQA 693

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
            +++I  ++  G   V        W+ +    +L  +A     +  +++   +  I    
Sbjct: 694 NSKQIGILKANGASSV-----TISWSYVSYAVILVFIAIPLGWMAGTMLQVPFVAIFKDY 748

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIG----IVAMKE 331
           F   F +   + +    LI        IG    +VA+  
Sbjct: 749 F--SFQTNVLIYDWLAPLISIIIFGVLIGVFSFLVALFH 785


>gi|170724538|ref|YP_001758564.1| hypothetical protein Swoo_0168 [Shewanella woodyi ATCC 51908]
 gi|169809885|gb|ACA84469.1| conserved hypothetical protein [Shewanella woodyi ATCC 51908]
          Length = 98

 Score = 37.1 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 19/33 (57%)

Query: 36 QSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
          Q++   +D S ++ +DT GA+L+  F +    +
Sbjct: 30 QAEILHIDASQLSRVDTAGAQLLHLFSKTCDAR 62


>gi|291449295|ref|ZP_06588685.1| predicted protein [Streptomyces roseosporus NRRL 15998]
 gi|291352242|gb|EFE79146.1| predicted protein [Streptomyces roseosporus NRRL 15998]
          Length = 141

 Score = 37.1 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 35/91 (38%), Gaps = 2/91 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E    V   +G+     ++ +   + ++      S   +VDLS +   D+    +++   
Sbjct: 39  EREALVLSVSGDLDIDSVTPLG--LALSSAADDGSGPVVVDLSGVGFADSTTVNVLLQGH 96

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
                +++L   S  +++L  +I       +
Sbjct: 97  TALGDRLRLAAPSPFMQRLIGMIGLDSALPV 127


>gi|295838820|ref|ZP_06825753.1| STAS domain-containing protein [Streptomyces sp. SPB74]
 gi|197695366|gb|EDY42299.1| STAS domain-containing protein [Streptomyces sp. SPB74]
          Length = 112

 Score = 37.1 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 35/83 (42%), Gaps = 4/83 (4%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME- 63
           G  V    G+       ++ +DVV A+  +    +  +D + +   D++G  +++     
Sbjct: 19  GRVVIALIGDLDYDTAEQLGEDVVTALA-TPGVRALALDCAGLEGCDSMGLAVLLQVRRH 77

Query: 64  --KYHGKIKLQGVSTHIEQLFSL 84
             +   ++ L+  +  + +L  L
Sbjct: 78  TDRAGVRLTLERPTDSLRRLLGL 100


>gi|255646574|gb|ACU23761.1| unknown [Glycine max]
          Length = 305

 Score = 37.1 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 80/243 (32%), Gaps = 28/243 (11%)

Query: 38  DSAIVDLSAITEID----TIGAELIMYFM-------EKYHGKIKLQGVSTHIEQLFSLIS 86
                D   I   D    T+    ++  +       +  +      G+   ++   S   
Sbjct: 36  PKVEWDFEGIHYFDNGPLTVQYLFVLDALNFCFWPDKDLNYDDLASGLKAALQNDKSAFD 95

Query: 87  FTHRKKIKNQK-------PQRSFFYNSFKNLHYHIGKKIVK-FINDSCSQAHILGLVISN 138
               +K    +       P+     +    L + +G ++ + F   + +     G    N
Sbjct: 96  ADRLQKYTGPQLRELLRWPRPLPLEDERVRLLHEVGIELERNFEGKASNLVECCGKSAMN 155

Query: 139 TGEFCASSYK-FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
                A  +  F+   +   RQ++    + +    L     G     QG  +    G+  
Sbjct: 156 LVALVARHFPGFRDHTVYKGRQVFLYKRAQIFAADLFGAFRG-----QGYGEFKDIGSLT 210

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE-EIDAIRTMGLDFVRILI 256
              D +    LR++GVL  +  +A    ++   EIG     E E+ A     ++ +R LI
Sbjct: 211 IMADYIVPAVLRQLGVLKYSPTLASTIEAS--GEIGPGTEEEVELRACSVHAVEKMRELI 268

Query: 257 SPR 259
           S +
Sbjct: 269 SVK 271


>gi|329934251|ref|ZP_08284330.1| putative anti-sigma factor antagonist [Streptomyces
          griseoaurantiacus M045]
 gi|329305847|gb|EGG49702.1| putative anti-sigma factor antagonist [Streptomyces
          griseoaurantiacus M045]
          Length = 103

 Score = 37.1 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 24/65 (36%), Gaps = 6/65 (9%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            +G      +G        ++A+ +         S   +VDL+ +  +D+ G  ++   
Sbjct: 12 GPDGTGRLAVSGEIDMSNAGDLAEALDS------GSGPLVVDLTGVEYLDSAGLSVLFAH 65

Query: 62 MEKYH 66
           E+  
Sbjct: 66 AERLE 70


>gi|238064436|ref|ZP_04609145.1| hypothetical protein MCAG_05402 [Micromonospora sp. ATCC 39149]
 gi|237886247|gb|EEP75075.1| hypothetical protein MCAG_05402 [Micromonospora sp. ATCC 39149]
          Length = 115

 Score = 37.1 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 38/109 (34%), Gaps = 6/109 (5%)

Query: 2   SENGI-TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
            +NG+    R AG   +    E+   +     +  +    +VDL+ +T  D+ G    + 
Sbjct: 9   QQNGVGACLRLAGELDTSTAPELNAVLDRLTKRGERH--LLVDLAELTFCDSTGIAAFVR 66

Query: 61  FMEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106
              +   +   +++ G +  +E++  L         +      +     
Sbjct: 67  GDNQAAARGGWLRVTGATGRVERVLRLTGLAEVLGYQPDTAHPTSQSAP 115


>gi|224054198|ref|XP_002298140.1| sulfate/bicarbonate/oxalate exchanger and transporter sat-1
           [Populus trichocarpa]
 gi|222845398|gb|EEE82945.1| sulfate/bicarbonate/oxalate exchanger and transporter sat-1
           [Populus trichocarpa]
          Length = 699

 Score = 37.1 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 14/97 (14%), Positives = 37/97 (38%)

Query: 24  ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFS 83
            +D  +  N        I+D++A+T IDT G +L+    +    +     +S +   L  
Sbjct: 577 EEDEWIKANDRSPLKCIILDMTAVTAIDTSGIDLLCELRKMMEKRSLKARLSPNQSHLAL 636

Query: 84  LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
           +++      ++     +         ++  +G+ +  
Sbjct: 637 VLANPVGSVMEKLHQSKMLDSFGLNGIYLAVGEAVAD 673


>gi|188587217|ref|YP_001918762.1| polymorphic outer membrane protein [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179351904|gb|ACB86174.1| polymorphic outer membrane protein [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 863

 Score = 37.1 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 7/107 (6%)

Query: 271 TILANFSAIIGASIVIWKYYDIPF-AVFFS-RFHSTATLANIFTGLIK-APFMACAIGIV 327
             +A    I+      +    + F  VF S    +      +  G+I+ +      +GIV
Sbjct: 78  AGIAVVVGILFGIFGAYIALKVYFLGVFLSVSLVTGLIALALTRGMIELSVIFGIILGIV 137

Query: 328 AMKEGFAVGVH-SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           A+     V      S G    + V   I+ V  ++    I  + I I
Sbjct: 138 AVYF---VKPSIIISTGISGGSSVAGVIAGVFGLNIALQILLYPITI 181


>gi|159030892|emb|CAO88573.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 782

 Score = 37.1 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 80/257 (31%), Gaps = 10/257 (3%)

Query: 57  LIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116
           L+     + +     +       +    +          Q   ++    +        G 
Sbjct: 285 LLAVLEGQTNLIEDREATKEQATKAVEAVDMVMSNAQTGQIIVKAGEKITQAQFVLIDGF 344

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV--PVVIL- 173
            + +   +         LV S  G FC  + +    L    R    +G+     P++ + 
Sbjct: 345 GLSERGINWMGLGSTAILVTSAIGTFCLVAQRLHRPLRH--RDFLLLGLLSFTTPILAIA 402

Query: 174 -ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
            I F   A +    +       A    +    +      G  ++A +IAG  G  + A I
Sbjct: 403 NIPFTNLAAVGLLVSSFYGPTLAVTQVLLTAGLSLFSIQG--ISADLIAGTIGGLLAAMI 460

Query: 233 GS-MKINEEIDAIRT-MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
            + ++  +E+  +   +G+    + +   +     +  ++  L   + + G S + W   
Sbjct: 461 AAKLRSRDELSLLGMGIGVSQGGVYLLTYLIVSATASTVIYTLLPTALVYGLSGIAWTVI 520

Query: 291 DIPFAVFFSRFHSTATL 307
            +  + +  R     T 
Sbjct: 521 ALGLSPYLERCFDVVTP 537


>gi|92113597|ref|YP_573525.1| anti-sigma-factor antagonist domain-containing protein
           [Chromohalobacter salexigens DSM 3043]
 gi|91796687|gb|ABE58826.1| anti-sigma-factor antagonist (STAS) domain protein
           [Chromohalobacter salexigens DSM 3043]
          Length = 171

 Score = 37.1 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/89 (12%), Positives = 33/89 (37%), Gaps = 5/89 (5%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G+ V + +G+     +    D     +  S    + ++DL   T +D+     +      
Sbjct: 13  GVFVLKLSGD-VRLTLCATLDQQAQRVADSPGLAAVMIDLREATNVDSTALGFLAKVAMA 71

Query: 65  YHGKIK----LQGVSTHIEQLFSLISFTH 89
             G+++    +      + ++  ++ F+ 
Sbjct: 72  VEGRLEQPPTIVAEHPDVRRMLDVMGFSR 100


>gi|224825147|ref|ZP_03698253.1| anti-sigma-factor antagonist [Lutiella nitroferrum 2002]
 gi|224602818|gb|EEG08995.1| anti-sigma-factor antagonist [Lutiella nitroferrum 2002]
          Length = 105

 Score = 37.1 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 29/69 (42%)

Query: 19 EISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHI 78
           I        + ++     D   +DLSA+ EIDT G +L++    +   + K   +  H 
Sbjct: 19 TIYNATAQKQLLLDALQAGDGLELDLSAVAEIDTAGFQLLLLAKREARHQDKPLLIVAHS 78

Query: 79 EQLFSLISF 87
            +  ++ F
Sbjct: 79 PAVREVVDF 87


>gi|330466666|ref|YP_004404409.1| sulfate transporter family protein [Verrucosispora maris AB-18-032]
 gi|328809637|gb|AEB43809.1| sulfate transporter family protein [Verrucosispora maris AB-18-032]
          Length = 587

 Score = 37.1 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 34/81 (41%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           V R  G         ++D ++    +     + ++D SAIT+IDT GA  +    E+  G
Sbjct: 461 VVRVDGTLYFANAQRLSDQLLTMAGQRTGLAAIVLDASAITDIDTDGATALAELRERLAG 520

Query: 68  KIKLQGVSTHIEQLFSLISFT 88
              +  ++T    +  L+   
Sbjct: 521 HDVVLHLATVRGPVRDLLDRA 541


>gi|205373762|ref|ZP_03226564.1| anti-sigma F factor antagonist (stage II sporulation protein AA)
           [Bacillus coahuilensis m4-4]
          Length = 121

 Score = 37.1 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 45/105 (42%), Gaps = 4/105 (3%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62
           + V R  G        E+ +     I    Q    +++L  ++ +D+ G  +I+     +
Sbjct: 16  VMVIRLQGELDHHAAEELREKASNMIQ-DYQVKHIVLNLKQLSFMDSSGLGVILGRYKEI 74

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF 107
           ++++G++ +  VS  ++++F L        ++  + +      +F
Sbjct: 75  KQHNGEMVVCEVSPAVKRIFELSGLFKIVHLEATEEEALNRLGAF 119


>gi|71906372|ref|YP_283959.1| Sulfate transporter/antisigma-factor antagonist STAS
          [Dechloromonas aromatica RCB]
 gi|71845993|gb|AAZ45489.1| Sulfate transporter/antisigma-factor antagonist STAS
          [Dechloromonas aromatica RCB]
          Length = 101

 Score = 37.1 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 37/90 (41%), Gaps = 4/90 (4%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          ++E G  V +  G +               +       S +VD S +  +D+    +++ 
Sbjct: 6  LNEAGKAVIKLVGRFD-FNTHREFRGSYEPLVSDTSVRSVVVDFSGVDYLDSSALGMLLM 64

Query: 61 FMEKYHG---KIKLQGVSTHIEQLFSLISF 87
            +K  G   ++ L GV  +++Q+  + +F
Sbjct: 65 LRDKLGGANKEVALTGVRGNVKQVLDIANF 94


>gi|46201619|ref|ZP_00208177.1| COG1502: Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi
           n synthases and related enzymes [Magnetospirillum
           magnetotacticum MS-1]
          Length = 514

 Score = 37.1 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 78/218 (35%), Gaps = 45/218 (20%)

Query: 24  ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIE---- 79
              ++    +SI   + I D       D +GA ++   +      ++++ +    E    
Sbjct: 71  RAALIDRAERSIDFQTFIFDA------DEVGAFILDRLIAAARRGVRVRILLDDYELGLD 124

Query: 80  -QLFSLISFTHRKKIK--NQKPQRSFFYNSFKNL--HYHIGKKIVKFINDSCSQAHILGL 134
             L + +      +++  N  P R+ +  S + L     +G+++   +  +  Q  +LG 
Sbjct: 125 DGLLARLDGEPNMEVRIFNPFPDRARWTRSAQMLWNLDRLGRRMHNKVLVADGQLALLG- 183

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
                G    S++ F+G   S  R +                +T   +A Q A     F 
Sbjct: 184 -----GRNI-SNHYFEGPSESNFRDIE--------------LLTTGAVATQAAASFDSFW 223

Query: 195 AEIFSIDLMSILQLREIGVLLTAV-----MIAGRSGSA 227
           A     ++ +    RE      A+     ++AG SG A
Sbjct: 224 ASPMVGEVRAFD--RE--PDAEALDTLLSLLAGASGPA 257


>gi|295104209|emb|CBL01753.1| S-adenosyl-methyltransferase MraW [Faecalibacterium prausnitzii
           SL3/3]
          Length = 321

 Score = 37.1 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 79/253 (31%), Gaps = 52/253 (20%)

Query: 40  AIVDLSAITEID-TIGA-----ELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
             +D +  T +D T G      ++ +       G++        ++Q    +     +  
Sbjct: 28  LAIDPAG-TYLDGTAGGAGHSRQIALRLDAAKGGRL------ISLDQDPDAVQTARSRLA 80

Query: 94  KNQKPQRSFFYNSFKNLHYHIG-KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGF 152
                     +         +G +KI   + D    +H L            +    +  
Sbjct: 81  GLPATVVQINFRYAGQALEQLGIEKINGALLDLGVSSHQLDDAARGFSYRADAPLDMR-- 138

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS-ILQLREI 211
                  M   G +        + +      ++ A  L  +G E ++  +   I++ RE 
Sbjct: 139 -------MSQQGETA-------ADLVNTESREELARILRDYGEEPYAWQIAGKIVETRET 184

Query: 212 GVLLTAVMIAGRSGSAI-----------------VAEIGSMKINEEIDAIRTMGLDFVRI 254
             +LT + +A    SA+                    I    +N E+DA+   GLD +  
Sbjct: 185 APILTTLQLADIVASAMPPAERRKNKNPSRRTFQALRIA---VNHELDALEE-GLDTIFD 240

Query: 255 LISPRIWALIISL 267
            ++P     +I+ 
Sbjct: 241 HLAPGGRLCVITF 253


>gi|325928342|ref|ZP_08189538.1| anti-anti-sigma factor [Xanthomonas perforans 91-118]
 gi|325541276|gb|EGD12822.1| anti-anti-sigma factor [Xanthomonas perforans 91-118]
          Length = 139

 Score = 37.1 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 13/110 (11%), Positives = 37/110 (33%), Gaps = 5/110 (4%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---M 59
           ++        G   +    ++   +   +   I   + ++DLSA+  I + G   I    
Sbjct: 12  QDTRQRVTLTGRLDTHTYQDLDAALSPLLGTRIT--TLVLDLSALEYISSAGIRCIFKAR 69

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
             +    GK+ +      I ++F ++       +     +   +  + + 
Sbjct: 70  KALATRQGKVLVSNPQPQIRKVFDMVKAVPLSDVFASTEELDAYLAAMQR 119


>gi|254294007|ref|YP_003060030.1| hypothetical protein Hbal_1645 [Hirschia baltica ATCC 49814]
 gi|254042538|gb|ACT59333.1| hypothetical protein Hbal_1645 [Hirschia baltica ATCC 49814]
          Length = 181

 Score = 37.1 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 20/54 (37%), Gaps = 11/54 (20%)

Query: 320 MACAIGIV-----AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
            A  +GI+         G+ VG      G    +    S  +V ++ ++   +Y
Sbjct: 129 FAILVGIITGTASGAYNGYKVGGVP---GAATGSA---SGFVVAVLGAVLTGWY 176


>gi|302393818|sp|Q04561|RPOA_PRRSL RecName: Full=Replicase polyprotein 1ab; AltName: Full=ORF1ab
            polyprotein; Contains: RecName: Full=Nsp1-alpha
            papain-like cysteine proteinase; AltName:
            Full=PCP1-alpha; Contains: RecName: Full=Nsp1-beta
            papain-like cysteine proteinase; AltName: Full=PCP1-beta;
            Contains: RecName: Full=Nsp2 cysteine proteinase;
            AltName: Full=CP2; Short=CP; Contains: RecName:
            Full=Non-structural protein 3; Short=Nsp3; Contains:
            RecName: Full=3C-like serine proteinase; Short=3CLSP;
            AltName: Full=Nsp4; Contains: RecName:
            Full=Non-structural protein 5-6-7; Short=Nsp5-6-7;
            Contains: RecName: Full=Non-structural protein 8;
            Short=Nsp8; Contains: RecName: Full=RNA-directed RNA
            polymerase; Short=Pol; Short=RdRp; AltName: Full=Nsp9;
            Contains: RecName: Full=Helicase; Short=Hel; AltName:
            Full=Nsp10; Contains: RecName: Full=Non-structural
            protein 11; Short=Nsp11; Contains: RecName:
            Full=Non-structural protein 12; Short=Nsp12
          Length = 3855

 Score = 37.1 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 64/161 (39%), Gaps = 20/161 (12%)

Query: 133  GLVISNTGEFCASSYKFKGF-LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
            GL            ++  G     ++   +++    +P V++ +       A       +
Sbjct: 1898 GLSTVQLLCVFFLLWRMMGHAWTPIVAVGFFLLNEILPAVLVRAVF---SFALFVLAWAT 1954

Query: 192  QFGAEIFSIDLMSILQLR-EIGVLLTAVMIAGRSGSAIVAEIGSM--KINEEIDAIRTMG 248
             + A++  I L++    R ++ +   A+   G  G  + AEIG+   +++E   A+ T  
Sbjct: 1955 PWSAQVLMIRLLTASLNRNKLSLAFYAL--GGVVG--LAAEIGTFAGRLSELSQALST-- 2008

Query: 249  LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
                     PR+ A+   +P  TI+      +G  + ++KY
Sbjct: 2009 -----YCFLPRVLAMTSCVP--TIIIGGLHTLGVILWLFKY 2042


>gi|290985539|ref|XP_002675483.1| predicted protein [Naegleria gruberi]
 gi|284089079|gb|EFC42739.1| predicted protein [Naegleria gruberi]
          Length = 850

 Score = 37.1 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 36/95 (37%), Gaps = 14/95 (14%)

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV-IWKYYDIPFAV----F 297
           A+  MG+            +  I+  ++  + +   +IG  I  I  + +  F V    F
Sbjct: 242 AMIMMGMKESAY-----FLSWFITFLIICAVFSLVNVIGGMIFQISIFLNTDFIVLYVLF 296

Query: 298 FSRFHSTATLANIFTGLIK----APFMACAIGIVA 328
           FS   S   LA + +  IK    A  +   +  ++
Sbjct: 297 FSFTFSLICLAFLLSTFIKESKSALVLGFTVLAIS 331


>gi|256392581|ref|YP_003114145.1| anti-sigma-factor antagonist [Catenulispora acidiphila DSM 44928]
 gi|256358807|gb|ACU72304.1| anti-sigma-factor antagonist [Catenulispora acidiphila DSM 44928]
          Length = 115

 Score = 37.1 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 34/84 (40%), Gaps = 3/84 (3%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
          G  V   AG+      +    +V  A + S      ++D S IT +D++G  ++++  ++
Sbjct: 12 GRVVLAVAGDVDLAAHTRFEAEVEQAWDGSTD---LVIDCSGITFLDSMGLRVLVHTKQR 68

Query: 65 YHGKIKLQGVSTHIEQLFSLISFT 88
                   ++   + +  ++   
Sbjct: 69 ADETGHSVVLAAPSDPVLRVLDLA 92


>gi|297564180|ref|YP_003683153.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp.
          dassonvillei DSM 43111]
 gi|296848629|gb|ADH70647.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp.
          dassonvillei DSM 43111]
          Length = 118

 Score = 36.8 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 37/86 (43%), Gaps = 5/86 (5%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          S+  + V    G        ++ D+++ A+    +    +VD+S +   D+ G  +++  
Sbjct: 9  SQQDVAVVTVGGEIDLYTAPQLRDELIGALEDGARR--LVVDMSRVEFCDSTGISVLLSA 66

Query: 62 MEKYH---GKIKLQGVSTHIEQLFSL 84
          M++     G ++L      + ++  +
Sbjct: 67 MKRSRDKDGDLELVAPRPAVTKVLEV 92


>gi|282865602|ref|ZP_06274653.1| anti-sigma-factor antagonist [Streptomyces sp. ACTE]
 gi|282559646|gb|EFB65197.1| anti-sigma-factor antagonist [Streptomyces sp. ACTE]
          Length = 128

 Score = 36.8 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 25/73 (34%), Gaps = 1/73 (1%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG-AELIMYFME 63
          G    R  G+       E+A      +    +     +D + +   D++G A L++    
Sbjct: 18 GTARLRLTGDLDYDTSGELARAAEECLAADPRLADLHLDCAQLRLCDSMGVATLLLIHRG 77

Query: 64 KYHGKIKLQGVST 76
               ++L   S 
Sbjct: 78 TTARGVRLHVESP 90


>gi|169595514|ref|XP_001791181.1| hypothetical protein SNOG_00497 [Phaeosphaeria nodorum SN15]
 gi|160701110|gb|EAT91992.2| hypothetical protein SNOG_00497 [Phaeosphaeria nodorum SN15]
          Length = 1088

 Score = 36.8 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 31/83 (37%), Gaps = 8/83 (9%)

Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT----GLIKAPFMACAIGI 326
           TI+ N  +  G S+     Y    A +F  +   A+  NIF     GL+ +   A  +G 
Sbjct: 260 TIIGNRISFFGLSLAAAITYGGGAADYFVYYPEHASAWNIFGMTLAGLVCSFTFAFVLG- 318

Query: 327 VAMKEGFAVGVHSN---SLGKKV 346
           + +  G  +         + +  
Sbjct: 319 IGLACGMVMRPDWEAAYGVSQGA 341


>gi|153003877|ref|YP_001378202.1| hypothetical protein Anae109_1009 [Anaeromyxobacter sp. Fw109-5]
 gi|152027450|gb|ABS25218.1| hypothetical protein Anae109_1009 [Anaeromyxobacter sp. Fw109-5]
          Length = 109

 Score = 36.8 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 36/82 (43%), Gaps = 5/82 (6%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          +E G TV R +G +     +E+A  +         +   ++D S + E   +G   + + 
Sbjct: 11 TEGGRTVIRLSGVFDHASAAELAQRLQQE-----AATEVVLDFSLVREFADLGVAALAHG 65

Query: 62 MEKYHGKIKLQGVSTHIEQLFS 83
          +     ++ ++G+  H  ++F 
Sbjct: 66 LAGGRQRLLMRGLRQHQLRIFR 87


>gi|269960376|ref|ZP_06174750.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269834987|gb|EEZ89072.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 106

 Score = 36.8 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 10/82 (12%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLS--AITEIDTIGAELIMYFME-- 63
          + +  G      +  +      A+ +  Q     ++ S   I  ID+ G  ++++ +E  
Sbjct: 14 ILKLTGALDRDTVPALW-----AVAQQWQPSQTELECSLQEIERIDSAGMVMLIHLLEHA 68

Query: 64 -KYHGKIKLQGVSTHIEQLFSL 84
           K +  I L  V   +  LF L
Sbjct: 69 KKQNCHIMLSFVPAQLRTLFQL 90


>gi|284044887|ref|YP_003395227.1| anti-sigma-factor antagonist [Conexibacter woesei DSM 14684]
 gi|283949108|gb|ADB51852.1| anti-sigma-factor antagonist [Conexibacter woesei DSM 14684]
          Length = 114

 Score = 36.8 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 12/94 (12%), Positives = 35/94 (37%), Gaps = 7/94 (7%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
                V   +G      + ++A     A+ +       ++DL  ++ +D+ G  L++   
Sbjct: 17  RGETLVATPSGELDVATVPQLA----AALREHDGFARLLIDLRPLSFMDSSGLRLLVAEH 72

Query: 63  EKYHG---KIKLQGVSTHIEQLFSLISFTHRKKI 93
           ++      ++ L      +++L  +     R  +
Sbjct: 73  DRAQRGGYELALVRGGAEVDRLLRVTRLDERLPL 106


>gi|293115756|ref|ZP_06604589.1| anti-sigma F factor antagonist [Butyrivibrio crossotus DSM 2876]
 gi|292808406|gb|EFF67611.1| anti-sigma F factor antagonist [Butyrivibrio crossotus DSM 2876]
          Length = 128

 Score = 36.8 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 37/83 (44%), Gaps = 4/83 (4%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YF 61
           GI +    G+        I D++   IN   +  +   +   ++ +D+ G  L+M     
Sbjct: 21  GILIVNLGGDLDHHVTEMIRDEIDRKINGQ-KVHTITFNFRNVSFMDSAGIGLLMGRYRK 79

Query: 62  MEKYHGKIKLQGVSTHIEQLFSL 84
           +++  G+I +  +   ++++F +
Sbjct: 80  IKEIGGEIYVSNIGQGVQRIFRM 102


>gi|182436852|ref|YP_001824571.1| putative anti-sigma factor antagonist [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|178465368|dbj|BAG19888.1| putative anti-sigma factor antagonist [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 151

 Score = 36.8 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 6/75 (8%)

Query: 2   SENGI-TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM- 59
           +E G  TV R +G         +   V  A+ +       ++DLS +   D+ G  +++ 
Sbjct: 35  AEQGSWTVLRMSGELDLVTSPVVRQSVHEAVAE--GQHDVVLDLSEVFFCDSSGVGVLIA 92

Query: 60  --YFMEKYHGKIKLQ 72
               M+   G+++L 
Sbjct: 93  SRRLMKSCGGRLRLV 107


>gi|210077436|gb|ACJ06987.1| replicase polyprotein 1a [Porcine reproductive and respiratory
            syndrome virus]
          Length = 2376

 Score = 36.8 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 58/144 (40%), Gaps = 18/144 (12%)

Query: 133  GLVISNTGEFCASSYKFKGF-LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
            GL            ++  G     ++   +Y+    +P V++ +       A       +
Sbjct: 1878 GLSTVQLLCVFFLLWRMMGHAWTPIVAVGFYMLNEILPAVLVRAVF---SFALFDLAWAT 1934

Query: 192  QFGAEIFSIDLMSILQLR-EIGVLLTAVMIAGRSGSAIVAEIGSM--KINEEIDAIRTMG 248
             + A++  I L++    R ++ ++  A+   G  G  + AEIG+   +++E   A+ T  
Sbjct: 1935 PWSAQVLMIRLLTAALTRNKLSLVFYAL--GGVVG--LAAEIGTFAGRLSELSQALST-- 1988

Query: 249  LDFVRILISPRIWALIISLPLLTI 272
                     PR+ A+   +P++ I
Sbjct: 1989 -----YCFLPRVLAMTSCVPIIII 2007


>gi|289642188|ref|ZP_06474339.1| anti-sigma-factor antagonist [Frankia symbiont of Datisca
           glomerata]
 gi|289508034|gb|EFD28982.1| anti-sigma-factor antagonist [Frankia symbiont of Datisca
           glomerata]
          Length = 128

 Score = 36.8 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 45/105 (42%), Gaps = 5/105 (4%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK--- 64
           V R  G+     +  + + ++ A  +       +VDL+ ++ +D+ G  +I++  ++   
Sbjct: 16  VVRPIGDVDYSSLEPLREALLDA--RIAGVRDIVVDLAEVSFMDSQGLAVILFAHQRQRS 73

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
             G++ L+  S  I +L  + +  H   +++   QR         
Sbjct: 74  VGGRLILRSPSEEIARLLCVTNVAHVIDVESGNSQRDPAAPRAGG 118


>gi|254000414|ref|YP_003052477.1| anti-sigma-factor antagonist [Methylovorus sp. SIP3-4]
 gi|253987093|gb|ACT51950.1| anti-sigma-factor antagonist [Methylovorus sp. SIP3-4]
          Length = 106

 Score = 36.8 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 3/73 (4%)

Query: 19 EISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EKYHGKIKLQGVS 75
           I E A+     +    Q  +  +DL+ +TEIDT G +L++      ++    + + G S
Sbjct: 21 TIFEAAEYHAALLPPVTQCHTLELDLTNVTEIDTSGLQLLVSAKLRSQQTGSTLSITGHS 80

Query: 76 THIEQLFSLISFT 88
            ++Q+       
Sbjct: 81 ETVQQVLDATDLA 93


>gi|114321368|ref|YP_743051.1| anti-sigma-factor antagonist [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227762|gb|ABI57561.1| anti-sigma-factor antagonist [Alkalilimnicola ehrlichii MLHE-1]
          Length = 109

 Score = 36.8 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 13/93 (13%), Positives = 32/93 (34%), Gaps = 3/93 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
           F+ +G+     +  +  +          S    +DL A+   D+ G  L++    +    
Sbjct: 20  FQLSGDLSFETVPGLWAEAERLFR---GSGDVELDLGAVARTDSAGLALLVALTRRAAQH 76

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
            +        EQL ++   +         P+++
Sbjct: 77  DQAIRFCHFPEQLRAMARLSGLADFLQLAPEKA 109


>gi|260574473|ref|ZP_05842477.1| anti-sigma-factor antagonist [Rhodobacter sp. SW2]
 gi|259023369|gb|EEW26661.1| anti-sigma-factor antagonist [Rhodobacter sp. SW2]
          Length = 115

 Score = 36.8 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 39/101 (38%), Gaps = 3/101 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
               + +    G+ +      I     M       +   ++DLS ++ +D+ G   ++  
Sbjct: 7   QRGDLLIVTAMGD-RIDAAGAIQFKDRMREITEAPTRRVLLDLSRVSFLDSSGLGAVVAV 65

Query: 62  MEKYH--GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100
           M+      K++L G++  ++++F L        I    P R
Sbjct: 66  MKALGPDRKLELAGLTPTVQKVFRLTRMDSVFTIHPAVPDR 106


>gi|297568250|ref|YP_003689594.1| aminopeptidase N [Desulfurivibrio alkaliphilus AHT2]
 gi|296924165|gb|ADH84975.1| aminopeptidase N [Desulfurivibrio alkaliphilus AHT2]
          Length = 967

 Score = 36.8 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 66/208 (31%), Gaps = 26/208 (12%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G  +   AG W++ E  ++    V    + +        L  +   D   A L++    
Sbjct: 606 SGSLILELAGRWQAREYLQLPGGFVDTYRQLLAR------LPGLE--DKSFAALLVALPT 657

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK--- 120
           + +   ++  +   +E L +   F  R+     +P+    Y SF       G+       
Sbjct: 658 EEYLAEQMALI--DVEALHTAREFVRRELAVALRPRWEEIYRSF--PVATEGEGTYDPRL 713

Query: 121 -FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                  +QA    L +++  E  A +           +Q +  G     +  L   V  
Sbjct: 714 AGGRRLRNQALFFLLALADDRELIALAR----------QQFFQAGNMTDSLAALRGLVHA 763

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           A +++Q      +     +      +  
Sbjct: 764 AAVSEQPHRIFGRSARLTYLGYAAPVCL 791


>gi|330960754|gb|EGH61014.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. maculicola str. ES4326]
          Length = 96

 Score = 36.8 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 6/87 (6%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--- 58
          + +     +  G      ++E+A  ++  I  + +     VDLS +TE+D  G +L+   
Sbjct: 7  TTDDPARVQIDGELTIYTVTELAARILPQIGSAAR---MEVDLSHVTEMDGAGLQLLAVI 63

Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLI 85
              EK    + + G S  + + F L 
Sbjct: 64 QREAEKAGTALHMTGQSKAVTETFELC 90


>gi|296087331|emb|CBI33705.3| unnamed protein product [Vitis vinifera]
          Length = 306

 Score = 36.8 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 47/281 (16%), Positives = 91/281 (32%), Gaps = 46/281 (16%)

Query: 9   FRFAGNWKSPEISEIA------DDVVMAINKSIQSDSAIVDLSAITEID----TIGAELI 58
            R +  W +   + +       +  V  I  SI       D   I   D    T+    +
Sbjct: 4   VRASSAWVAARSAHVVVDSSGIEKAVEEIQDSI--PKVKWDFEGIHYFDNGPLTVQYLFV 61

Query: 59  MYFMEK-YHGKIKLQ------GVSTHIEQLFSLISFTHRKKIKNQK-------PQRSFFY 104
           +  +   +     L       G+   ++   S+      +KI   +       P+     
Sbjct: 62  LDALNFCFWPDKDLSYDHLALGLKEALQNDKSVFDSDRLQKITGPQLRELLKWPRPLPLE 121

Query: 105 NSFKNLHYHIGKKIVKFINDSCS-QAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYY 162
           N    L + +G ++ +      S      G   +N        +  F+   +    Q++ 
Sbjct: 122 NERVRLLHEVGLELERSFEGKASKLVESCGKSAANLVALVTRHFPGFRDHSVYKGHQVFL 181

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL-----LTA 217
              + +    L     G     QG  + +   +     D +    LR++GVL     L +
Sbjct: 182 YKRAQIFAADLWGAFEG-----QGYGEFNDISSITIFADYIVPAVLRQLGVLRYSSDLAS 236

Query: 218 VMIAGRSGSAIVAEIGSMKINE-EIDAIRTMGLDFVRILIS 257
           ++ A R       EIGS    E E+ A     ++ +R L+S
Sbjct: 237 IIEANR-------EIGSGSEEEVELRACSIYAVEKMRELLS 270


>gi|91791864|ref|YP_561515.1| SpoIIAA family protein [Shewanella denitrificans OS217]
 gi|91713866|gb|ABE53792.1| SpoIIAA family protein [Shewanella denitrificans OS217]
          Length = 98

 Score = 36.8 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 27/70 (38%), Gaps = 7/70 (10%)

Query: 26 DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME-------KYHGKIKLQGVSTHI 78
          ++     K   SD+  +D+S IT +D+ G  L++           K      L   S H+
Sbjct: 24 ELWPKRRKLFNSDTQALDVSGITYVDSAGVALLLELARLSHKGSPKRKMPRMLTNPSKHL 83

Query: 79 EQLFSLISFT 88
           ++  L    
Sbjct: 84 SKMIELYDLE 93


>gi|302538106|ref|ZP_07290448.1| anti-sigma factor antagonist [Streptomyces sp. C]
 gi|302447001|gb|EFL18817.1| anti-sigma factor antagonist [Streptomyces sp. C]
          Length = 121

 Score = 36.8 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 11/84 (13%), Positives = 37/84 (44%), Gaps = 6/84 (7%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY--- 60
          +G  +    G       + + + +  A  +       +VD++ +   D+ G   +++   
Sbjct: 18 DGAVLLTLGGELDHDTAAPLKEALDAAARR---GGRLLVDMAGLRFCDSTGLNALLHGRL 74

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSL 84
           +++  G ++L G++  + ++F +
Sbjct: 75 AVQEAGGSLELAGLTGPVARMFRI 98


>gi|195386206|ref|XP_002051795.1| GJ17189 [Drosophila virilis]
 gi|194148252|gb|EDW63950.1| GJ17189 [Drosophila virilis]
          Length = 466

 Score = 36.8 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 15/121 (12%), Positives = 46/121 (38%), Gaps = 2/121 (1%)

Query: 255 LISPRIWALIISLPLLTILA-NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
           + S +I    +S  +  +       +I ++ V        F  +++ F+     + +   
Sbjct: 313 IGSVQILGAYVSTIVCDVFGRKILMLISSAGVALCLTVFGFFTYYAGFYDMTEWSWVPVA 372

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSL-GKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           ++        IG+++      V +    +  +  +  +V   S+V ++ ++F +     G
Sbjct: 373 IMSLDIFLGNIGLISCLFVLMVEMFPLKIRARATSIAIVICSSLVFLMLNIFPLCMANWG 432

Query: 373 I 373
           +
Sbjct: 433 L 433


>gi|291435469|ref|ZP_06574859.1| anti-sigma factor antagonist [Streptomyces ghanaensis ATCC 14672]
 gi|291338364|gb|EFE65320.1| anti-sigma factor antagonist [Streptomyces ghanaensis ATCC 14672]
          Length = 181

 Score = 36.8 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 29/91 (31%), Gaps = 5/91 (5%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
            + G TV  F G        EI   +  A          ++DL+ +   D  G  L+   
Sbjct: 71  QDRGHTVLEFRGEIDIAAAEEIVPHLDAATAA--PDARIVIDLTRVEFFDCSGLRLLFRA 128

Query: 62  MEKY---HGKIKLQGVSTHIEQLFSLISFTH 89
             +    HG++ L        ++  +     
Sbjct: 129 RHRVLAGHGRLHLVCAHPLTLRMLRITDLAR 159


>gi|156975888|ref|YP_001446795.1| hypothetical protein VIBHAR_03654 [Vibrio harveyi ATCC BAA-1116]
 gi|156527482|gb|ABU72568.1| hypothetical protein VIBHAR_03654 [Vibrio harveyi ATCC BAA-1116]
          Length = 106

 Score = 36.8 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 6/80 (7%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---K 64
          + +  G      +  +       +    + + +   L  I  ID+ G  ++++ +E   K
Sbjct: 14 ILKLTGALDRDSVPALWAVAQQWLPSQTELECS---LEEIERIDSAGMVMLIHLLEHAKK 70

Query: 65 YHGKIKLQGVSTHIEQLFSL 84
           +  I L  V   +  LF L
Sbjct: 71 QNCHIMLSFVPAQLRTLFQL 90


>gi|126347595|emb|CAJ89307.1| putative anti-sigma factor antagonist [Streptomyces ambofaciens
          ATCC 23877]
          Length = 160

 Score = 36.8 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 31/81 (38%), Gaps = 5/81 (6%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAEL---IMYF 61
          G+ +   AG+  +     +  +    I +       ++DLS +   D+ G      + + 
Sbjct: 15 GLAIATVAGDVDTRTADTLRREASEIIQQ--GCPRLVLDLSGVRFCDSAGLSALIGLWHA 72

Query: 62 MEKYHGKIKLQGVSTHIEQLF 82
           +   G ++L  V   + ++ 
Sbjct: 73 AQAAGGALRLADVPDRLMRML 93


>gi|283852491|ref|ZP_06369759.1| anti-sigma-factor antagonist [Desulfovibrio sp. FW1012B]
 gi|283572099|gb|EFC20091.1| anti-sigma-factor antagonist [Desulfovibrio sp. FW1012B]
          Length = 111

 Score = 36.8 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 38/82 (46%), Gaps = 5/82 (6%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEKY 65
              AG         + + ++  + ++ +  +  +D++ ++ ID+ G  L++     + + 
Sbjct: 23  VTLAGEIDFSVTPAVRERLLALVGETPE--TITLDMADLSYIDSSGLALLIELRKHLAES 80

Query: 66  HGKIKLQGVSTHIEQLFSLISF 87
             K+ ++ +S  + +LF+L   
Sbjct: 81  GRKVAIRSLSPQVRKLFNLTQL 102


>gi|330468640|ref|YP_004406383.1| anti-anti-sigma factor [Verrucosispora maris AB-18-032]
 gi|328811611|gb|AEB45783.1| anti-anti-sigma factor [Verrucosispora maris AB-18-032]
          Length = 117

 Score = 36.8 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 13/105 (12%), Positives = 35/105 (33%), Gaps = 5/105 (4%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            G    R AG        E+ + +        +    ++DL+ +T  D+ G  + +    
Sbjct: 13  GGPARLRLAGELDMSSAPELNEAIDRLAAAGQRR--LLIDLAELTFCDSTGIAVFVRGDN 70

Query: 64  KYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105
           +   +   +++ G +  +E++  +          +  P       
Sbjct: 71  RAAEQGGWLRITGATGRVERVLKVTGLADVLGYGSADPGPDDRVG 115


>gi|257057452|ref|YP_003135284.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma
          factor) [Saccharomonospora viridis DSM 43017]
 gi|256587324|gb|ACU98457.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma
          factor) [Saccharomonospora viridis DSM 43017]
          Length = 105

 Score = 36.8 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 25/58 (43%), Gaps = 2/58 (3%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
           R +G         + + +  +I+  + +    +DLS ++ ID+ G  ++    E+  
Sbjct: 17 IRLSGEIDLSNSDAVREKIFASISNHLVA--VTLDLSEVSYIDSAGLRVLFALTERLR 72


>gi|126308814|ref|XP_001378941.1| PREDICTED: similar to ABCA8 protein [Monodelphis domestica]
          Length = 1631

 Score = 36.8 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 4/91 (4%)

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MGL      +S   W L+ +  +L +    + +    +VI   Y + F +F     S
Sbjct: 255 MTMMGLQSSAFWLS---WGLLYAGYILIMATFLALVTSTHLVIMTGYFVLFTLFLLYGLS 311

Query: 304 TATLANIFTGLI-KAPFMACAIGIVAMKEGF 333
               A +   LI K         ++++  G 
Sbjct: 312 LVAFAFLLCVLIKKPLLTGLIAFLLSVFWGC 342


>gi|311893945|dbj|BAJ26353.1| putative antagonist protein [Kitasatospora setae KM-6054]
          Length = 111

 Score = 36.8 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 13/93 (13%), Positives = 28/93 (30%), Gaps = 3/93 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---K 64
             R  G        E+   V   +          VD +A++  D++G   ++        
Sbjct: 19  TVRVEGELDHESCEELVRAVAAHLAAQPPYQVVRVDCAAMSLCDSMGLSALLQIRRDTDA 78

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97
              ++ L+    H+++L  L             
Sbjct: 79  AGRRLLLEHRPAHLDRLLRLTGTAAYLLADRAP 111


>gi|167947402|ref|ZP_02534476.1| hypothetical protein Epers_13022 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 43

 Score = 36.8 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
            V  +++PR W   IS+PLL  L +   +IG   V 
Sbjct: 1   PVHRILTPRFWGGFISMPLLAGLFSAVGVIGGYFVG 36


>gi|153834585|ref|ZP_01987252.1| YrbB protein [Vibrio harveyi HY01]
 gi|148869028|gb|EDL68073.1| YrbB protein [Vibrio harveyi HY01]
          Length = 106

 Score = 36.8 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 10/82 (12%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLS--AITEIDTIGAELIMYFME-- 63
          + +  G      +  +      A+ +  Q     ++ S   I  ID+ G  ++++ +E  
Sbjct: 14 ILKLTGALDRDSVPALW-----AVAQQWQPSQTELECSLEEIERIDSAGMVMLIHLLEHA 68

Query: 64 -KYHGKIKLQGVSTHIEQLFSL 84
           K +  I L  V   +  LF L
Sbjct: 69 KKQNCHIMLSFVPAQLRTLFQL 90


>gi|52841081|ref|YP_094880.1| hypothetical protein lpg0845 [Legionella pneumophila subsp.
          pneumophila str. Philadelphia 1]
 gi|54296866|ref|YP_123235.1| hypothetical protein lpp0907 [Legionella pneumophila str. Paris]
 gi|52628192|gb|AAU26933.1| hypothetical protein lpg0845 [Legionella pneumophila subsp.
          pneumophila str. Philadelphia 1]
 gi|53750651|emb|CAH12058.1| hypothetical protein lpp0907 [Legionella pneumophila str. Paris]
          Length = 93

 Score = 36.8 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 29/71 (40%), Gaps = 4/71 (5%)

Query: 16 KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEKYHGKIKLQ 72
              +  + D +  A+ +  +     +DLS +T  D+ G  LI+      ++ +    + 
Sbjct: 13 TFKSVVSVRDKLYKALMEDTRGRFC-LDLSEVTHCDSAGLALIIEARKLCKQNNKVFDVI 71

Query: 73 GVSTHIEQLFS 83
          G+S   + L  
Sbjct: 72 GISPETQSLAE 82


>gi|291438981|ref|ZP_06578371.1| anti sigma factor [Streptomyces ghanaensis ATCC 14672]
 gi|291341876|gb|EFE68832.1| anti sigma factor [Streptomyces ghanaensis ATCC 14672]
          Length = 124

 Score = 36.8 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 5/73 (6%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59
           + G  V R +G       S +   V  A+       S ++DLS +   D+ G  +++  
Sbjct: 9  EQGGWAVLRVSGELDLLTSSVLRQRVHDAVAD--GRHSLVLDLSDVWFCDSSGVGVLIAA 66

Query: 60 -YFMEKYHGKIKL 71
             +    G ++L
Sbjct: 67 RRLLRSCQGTLRL 79


>gi|330432400|gb|AEC17459.1| anti-anti-sigma factor [Gallibacterium anatis UMN179]
          Length = 113

 Score = 36.8 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 2/76 (2%)

Query: 16  KSPEISEIADDVVMAINKSIQS-DSAIVDLSAITEIDTIG-AELIMYFMEKYHGKIKLQG 73
             P++ +      +  N  +QS    + DL  I+ ID+ G A L    +     K++L  
Sbjct: 29  TVPQLWQQRQQFSLKENAELQSCQQLVWDLQQISHIDSAGFALLTELLLLNPAEKVRLIN 88

Query: 74  VSTHIEQLFSLISFTH 89
           +    + L +L S   
Sbjct: 89  LPEQCKNLAALFSLDQ 104


>gi|315501610|ref|YP_004080497.1| anti-sigma-factor antagonist [Micromonospora sp. L5]
 gi|315408229|gb|ADU06346.1| anti-sigma-factor antagonist [Micromonospora sp. L5]
          Length = 117

 Score = 36.8 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62
           TV   AG+       ++ D +         +   +VDL+ +  +D+ G   ++     +
Sbjct: 14 GTVIEVAGDLDMSTTPQLRDRLYELTEA--GARVVVVDLAGVGFMDSSGLGALVVGYKSL 71

Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTH 89
           +  G + L GV   + ++FS+ S   
Sbjct: 72 RERDGWLGLAGVRASVRRVFSITSVDR 98


>gi|282860687|ref|ZP_06269753.1| anti-sigma-factor antagonist [Streptomyces sp. ACTE]
 gi|282564423|gb|EFB69959.1| anti-sigma-factor antagonist [Streptomyces sp. ACTE]
          Length = 124

 Score = 36.8 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 29/73 (39%), Gaps = 5/73 (6%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59
           +   TV R  G         +   V  A+ +       ++DLS +   D+ G  +++  
Sbjct: 9  EQGAWTVLRIRGELDLASAPAVRQSVHGAVAE--GRHDVVLDLSGVFFCDSSGVNVLIAT 66

Query: 60 -YFMEKYHGKIKL 71
             M+   G+++L
Sbjct: 67 RRLMKSCGGRLRL 79


>gi|221134180|ref|ZP_03560485.1| putative anti-sigma F factor antagonist [Glaciecola sp. HTCC2999]
          Length = 108

 Score = 36.8 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 12/86 (13%), Positives = 33/86 (38%), Gaps = 4/86 (4%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          +        G+  +     +  + V  + +S       +DL  +  ID+ G  L+++  +
Sbjct: 9  DNKLTIHLTGDLDAQGCETLRGEFV-TLAESPSFALVDIDLEHVDFIDSSGIGLVVFLFK 67

Query: 64 KYHGK---IKLQGVSTHIEQLFSLIS 86
          K   +   + +  + +   +L  L+ 
Sbjct: 68 KLRTQEVDLSIVNIHSQPLELIKLLR 93


>gi|183220593|ref|YP_001838589.1| putative anti-sigma factor antagonist [Leptospira biflexa serovar
          Patoc strain 'Patoc 1 (Paris)']
 gi|189910701|ref|YP_001962256.1| anti-sigma factor antagonist [Leptospira biflexa serovar Patoc
          strain 'Patoc 1 (Ames)']
 gi|56384915|gb|AAV85860.1| putative anti-sigma factor antagonist [Leptospira biflexa serovar
          Patoc strain 'Patoc 1 (Paris)']
 gi|167775377|gb|ABZ93678.1| Antisigma factor antagonist [Leptospira biflexa serovar Patoc
          strain 'Patoc 1 (Ames)']
 gi|167779015|gb|ABZ97313.1| Putative anti-sigma factor antagonist [Leptospira biflexa serovar
          Patoc strain 'Patoc 1 (Paris)']
          Length = 110

 Score = 36.8 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 11/88 (12%), Positives = 37/88 (42%), Gaps = 4/88 (4%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          +G  V    G      ++   ++ +  +  S+     ++++  +  + + G    +  + 
Sbjct: 8  DGKLVVYLEGRLDV-SVANEVEEGLTELIDSLGHRKVLLNMKDVEYMSSSGFRACISTLR 66

Query: 64 KYHGK---IKLQGVSTHIEQLFSLISFT 88
          K + K   +K+  +   ++++F +I  T
Sbjct: 67 KLNSKEGFLKISNIKPAVKRIFDVIELT 94


>gi|254410510|ref|ZP_05024289.1| hypothetical protein MC7420_3025 [Microcoleus chthonoplastes PCC
          7420]
 gi|196182716|gb|EDX77701.1| hypothetical protein MC7420_3025 [Microcoleus chthonoplastes PCC
          7420]
          Length = 124

 Score = 36.8 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 37/90 (41%), Gaps = 4/90 (4%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MYFME 63
          ++ R  G   +    E+   +  AI  S +  + +VD+  +  +D+ G  ++   +   +
Sbjct: 11 SIVRPTGQVNASNAVELDRQLKSAI-LSERYSTVLVDMQQVETLDSAGLGVLVSALRLAQ 69

Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
          + + +  L  V   +  +F L       +I
Sbjct: 70 QRNQRFSLCSVGDSVRMIFELTQLDQAMEI 99


>gi|320010158|gb|ADW05008.1| Sulfate transporter/antisigma-factor antagonist STAS [Streptomyces
           flavogriseus ATCC 33331]
          Length = 131

 Score = 36.8 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 33/107 (30%), Gaps = 7/107 (6%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G  V R  G+  S  I  +   +  A          ++D SA+T  D+    L++    
Sbjct: 24  DGHWVVRAQGDLDSDTIDPLFIALWEAAP---GHAVVVLDASAVTFADSSFLSLLIEVHR 80

Query: 64  KYHGKIKLQGVS----THIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106
           +   ++   G           L  +I      +     P R      
Sbjct: 81  RTELRVAAPGTVLARLLRTAGLDRVIRSYPTLEAALGDPPRGSGAPP 127


>gi|24213539|ref|NP_711020.1| anti-sigma factor antagonist [Leptospira interrogans serovar Lai
          str. 56601]
 gi|45658618|ref|YP_002704.1| anti-sigma factor antagonist [Leptospira interrogans serovar
          Copenhageni str. Fiocruz L1-130]
 gi|24194323|gb|AAN48038.1| anti-sigma factor antagonist [Leptospira interrogans serovar Lai
          str. 56601]
 gi|45601862|gb|AAS71341.1| anti-sigma factor antagonist [Leptospira interrogans serovar
          Copenhageni str. Fiocruz L1-130]
          Length = 110

 Score = 36.8 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 12/89 (13%), Positives = 38/89 (42%), Gaps = 4/89 (4%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +G+ +    G       +E+ +++   I+        I+++  +  + + G    +  +
Sbjct: 7  RDGVLIVYLKGRLDVSIANEVEENLNDLIDNQ-GHKKVILNMQEVDYMSSSGFRACISTL 65

Query: 63 EKYH---GKIKLQGVSTHIEQLFSLISFT 88
           K +   G +K+  +   ++++F +I  T
Sbjct: 66 RKLNSKEGALKISNIKPAVKRIFDVIELT 94


>gi|297204186|ref|ZP_06921583.1| anti-sigma F factor antagonist [Streptomyces sviceus ATCC 29083]
 gi|197714124|gb|EDY58158.1| anti-sigma F factor antagonist [Streptomyces sviceus ATCC 29083]
          Length = 147

 Score = 36.4 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 11/85 (12%), Positives = 39/85 (45%), Gaps = 4/85 (4%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G+ V    G     ++  +  + +++ + ++     + DLS +T +D+ G  + +   +
Sbjct: 46  DGVRVVTVRGE-IDHDVKGVLTEALLSEDGAVPPPRIVADLSGVTFMDSSGINVFVAAYQ 104

Query: 64  KYHGK---IKLQGVSTHIEQLFSLI 85
           +  G    +++ G    + ++  ++
Sbjct: 105 QVSGAQGWLRIAGAQDSVLRVLQMV 129


>gi|307153376|ref|YP_003888760.1| anti-sigma-factor antagonist [Cyanothece sp. PCC 7822]
 gi|306983604|gb|ADN15485.1| anti-sigma-factor antagonist [Cyanothece sp. PCC 7822]
          Length = 107

 Score = 36.4 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 37/85 (43%), Gaps = 5/85 (5%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTI--GAELI-MYFMEK 64
          V + +G   + +  +   ++   + + I  D  ++D   +T +D+   GA ++ +     
Sbjct: 7  VVKPSGILDATQAPDFRQEISQLVKEKI--DIIVIDFRDVTFMDSSGLGALVLSLRTAHS 64

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89
             K+ L  ++  I+ LF L S   
Sbjct: 65 AGSKLFLCSINEQIQMLFKLTSMDR 89


>gi|148242429|ref|YP_001227586.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
           [Synechococcus sp. RCC307]
 gi|147850739|emb|CAK28233.1| Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
           [Synechococcus sp. RCC307]
          Length = 138

 Score = 36.4 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 37/106 (34%), Gaps = 3/106 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++   +F F G       SE      +  N        ++DLS I  ID+ G   ++   
Sbjct: 34  QDQCLLFHFTGQ--LDAYSERQFRDFIGDNAPSGLKPLVIDLSKIDFIDSSGLGALVQLA 91

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFK 108
           ++++   + + +     ++   +     +   N +P       +  
Sbjct: 92  KQWNEGKR-RFLIVGNSRVVQTVKLVRLEAFLNLQPDLPTALGNIA 136


>gi|159038342|ref|YP_001537595.1| anti-sigma-factor antagonist [Salinispora arenicola CNS-205]
 gi|157917177|gb|ABV98604.1| anti-sigma-factor antagonist [Salinispora arenicola CNS-205]
          Length = 178

 Score = 36.4 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 24/53 (45%), Gaps = 3/53 (5%)

Query: 16  KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            +  +  +   +  A          +VDLSA+ +ID++G  L++   ++   +
Sbjct: 86  SAAAVDPLRTALTEATE---HEGRVVVDLSAVEQIDSVGLGLLVRARQEARQR 135


>gi|255719113|ref|XP_002555837.1| KLTH0G18656p [Lachancea thermotolerans]
 gi|238937221|emb|CAR25400.1| KLTH0G18656p [Lachancea thermotolerans]
          Length = 957

 Score = 36.4 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 43/97 (44%), Gaps = 13/97 (13%)

Query: 160 MYYVGVSGVPVVILISFVTGA---VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +YYVG++ +   +++    G    VI    A  LS  G    +  L  +          T
Sbjct: 446 LYYVGLATLGGSVVLGLSGGLLAPVIGAGIAAGLSTAGITGATGFLTGVGG--------T 497

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           A++    + +AI A+IG+  +++ + ++RT     + 
Sbjct: 498 AIV--ATTSTAIGAKIGTQAMSKRMGSVRTFEFSPLH 532


>gi|89099503|ref|ZP_01172379.1| anti-anti-sigma factor (antagonist of RsbW) [Bacillus sp. NRRL
           B-14911]
 gi|89085889|gb|EAR65014.1| anti-anti-sigma factor (antagonist of RsbW) [Bacillus sp. NRRL
           B-14911]
          Length = 110

 Score = 36.4 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 45/100 (45%), Gaps = 6/100 (6%)

Query: 1   MSENGITV-FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
           + EN   V  + +G   +    ++ + +     K  ++   +VDLS ++ +D+ G  + +
Sbjct: 7   LKENDTLVQAKISGEIDAYTAPKLRESLFPLSEK--EAVEMVVDLSEVSYMDSTGLGVFV 64

Query: 60  YFMEKYH---GKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96
              +      GK ++ G+S  +++LF +        I +Q
Sbjct: 65  GVFKNVRSNNGKFQIVGLSERLKRLFEITGLADIIDINSQ 104


>gi|258652299|ref|YP_003201455.1| PAS/PAC sensor protein [Nakamurella multipartita DSM 44233]
 gi|258555524|gb|ACV78466.1| putative PAS/PAC sensor protein [Nakamurella multipartita DSM
           44233]
          Length = 340

 Score = 36.4 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 29/65 (44%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +GI V   AG+       +    +   + ++ +    +VDL+ +  + ++G  ++  F  
Sbjct: 238 DGIPVLHVAGDVDLSTGPQFTALLATLVGQAERPTPVVVDLTDLGHLGSVGLAVLTQFHR 297

Query: 64  KYHGK 68
           +  GK
Sbjct: 298 RCQGK 302


>gi|29347516|ref|NP_811019.1| putative transmembrane hexose transporter [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|253570857|ref|ZP_04848265.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|29339416|gb|AAO77213.1| putative transmembrane hexose transporter [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|251839806|gb|EES67889.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 386

 Score = 36.4 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 57/176 (32%), Gaps = 14/176 (7%)

Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219
           M   G   + ++ L+S   G ++      Q + + A        +ILQ+  +  LLT V+
Sbjct: 63  MDKKGRKTISLIGLLSTFIGMLLPLLTFTQTACYIAFALLGIGNTILQVS-LNPLLTNVI 121

Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279
             G+  S        M   + I A+ +     V    S      I+  P+   +   S I
Sbjct: 122 AEGKLSS-------IMTAGQFIKALSSFVGPIVAGFCSVYFNNWILMFPIFAAITLISGI 174

Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
                 I +  D      F +  S      I             I IV +  G  V
Sbjct: 175 WLFFTPINEKDDKRLTSSFYQVISLLKNKTI------CLLFGGIICIVGLDVGMNV 224


>gi|78187225|ref|YP_375268.1| anti-anti-sigma regulatory factor, SpoIIAA [Chlorobium luteolum
          DSM 273]
 gi|78167127|gb|ABB24225.1| anti-anti-sigma regulatory factor, SpoIIAA [Chlorobium luteolum
          DSM 273]
          Length = 107

 Score = 36.4 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 35/88 (39%), Gaps = 7/88 (7%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          NGI V    G   +    +    +  A      S   I++L  +  ID+ G  L++    
Sbjct: 9  NGIKVLSLEGVLNAASSPKFKAYLETA----DHSGPMIINLEQVEFIDSSGLGLLVRLAR 64

Query: 64 K---YHGKIKLQGVSTHIEQLFSLISFT 88
          +    +  +KL  ++  ++++F +    
Sbjct: 65 QKKSANEALKLAKMNDRVKRVFEITQAH 92


>gi|317488951|ref|ZP_07947481.1| anti-anti-sigma factor [Eggerthella sp. 1_3_56FAA]
 gi|325831058|ref|ZP_08164382.1| STAS domain protein [Eggerthella sp. HGA1]
 gi|316912025|gb|EFV33604.1| anti-anti-sigma factor [Eggerthella sp. 1_3_56FAA]
 gi|325486979|gb|EGC89425.1| STAS domain protein [Eggerthella sp. HGA1]
          Length = 101

 Score = 36.4 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 8/90 (8%), Positives = 38/90 (42%), Gaps = 6/90 (6%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK--- 64
           V +  G+  +   +++ + +     ++ +    ++D + +  + + G  +++   ++   
Sbjct: 15  VLKLGGHLNTNTAADLEEALEPVFERTSK---VVLDFADLEYLSSAGLRVLVATQKRVTA 71

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIK 94
             G +++   S  I ++F +        ++
Sbjct: 72  AEGALRIVNASDDIREVFDITGLIDVFDVE 101


>gi|313901410|ref|ZP_07834878.1| major facilitator superfamily MFS_1 [Thermaerobacter subterraneus
           DSM 13965]
 gi|313468324|gb|EFR63770.1| major facilitator superfamily MFS_1 [Thermaerobacter subterraneus
           DSM 13965]
          Length = 437

 Score = 36.4 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 18/139 (12%), Positives = 51/139 (36%), Gaps = 9/139 (6%)

Query: 87  FTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASS 146
                +   + P    +      +    G  +        +   +L  ++S   +     
Sbjct: 185 LVPEPQRPGEAPAPGPYLRRMGRIFQAKGASLAVSFLAGFTALFMLFGLLSVYSDLLERP 244

Query: 147 YKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF---GAEIFSIDLM 203
           +  +GF+  L+  +       V V  + ++V+G V+ ++ +  L      G  I ++   
Sbjct: 245 FGIRGFVKGLVVAI------PVAVATITAYVSGIVLQERLSRYLKAVVVTGLAILALGTA 298

Query: 204 SILQLREIGVLLTAVMIAG 222
           ++   R++  ++ A+ + G
Sbjct: 299 ALFLTRQLVPMVAAISVMG 317


>gi|218778831|ref|YP_002430149.1| anti-sigma-factor antagonist [Desulfatibacillum alkenivorans AK-01]
 gi|218760215|gb|ACL02681.1| anti-sigma-factor antagonist [Desulfatibacillum alkenivorans AK-01]
          Length = 125

 Score = 36.4 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 33/89 (37%), Gaps = 5/89 (5%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
           +    G+  +   S++   V   +  S        D+  +  + + G  +I+     +EK
Sbjct: 16  IIHLGGSLDTVTASQLDKKVDEVLTGSPAH--LTFDMENLEYMSSAGVRVILKASKGLEK 73

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
             GK     +   I+++F +I       I
Sbjct: 74  NKGKTTFVNLQPQIKKVFEIIRAMPDMSI 102


>gi|116621958|ref|YP_824114.1| anti-sigma-factor antagonist [Candidatus Solibacter usitatus
          Ellin6076]
 gi|116225120|gb|ABJ83829.1| anti-sigma-factor antagonist [Candidatus Solibacter usitatus
          Ellin6076]
          Length = 110

 Score = 36.4 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSD--SAIVDLSAITEIDTIGAELIMY 60
          ++GI V   AG      +    + +  AI   +  D  + ++D+S +  +D+ G  +++ 
Sbjct: 9  DSGIGVVTIAGR---LALGGETERLDAAIKGMLAKDVKTFVLDISGLDYVDSSGIGMLVS 65

Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSL 84
           +   +K  G++KL G +  I+++FS+
Sbjct: 66 CLTNAKKAGGELKLVGANPRIKRIFSM 92


>gi|300702842|ref|YP_003744443.1| hypothetical protein RCFBP_10493 [Ralstonia solanacearum CFBP2957]
 gi|299070504|emb|CBJ41799.1| conserved protein of unknown function, STAS domain [Ralstonia
           solanacearum CFBP2957]
          Length = 104

 Score = 36.4 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 12/102 (11%), Positives = 38/102 (37%), Gaps = 2/102 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSD--SAIVDLSAITEIDTIGAELIMYFMEKYH 66
              +G     E   I  +    ++++ Q+   +  VD + +++ID+    +++ +     
Sbjct: 2   LTLSGPLTHREAPRILREGEAQLSQASQAGTMAVRVDCAGLSQIDSSALAVLLSWQRTAQ 61

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFK 108
                  ++   E L +L +      +    P  +  ++  +
Sbjct: 62  AAGIALDIAAAPEALRNLATLYGVDALLAVAPATTASHHPAR 103


>gi|212638843|ref|YP_002315363.1| stage II sporulation protein AA (antagonist of anti-sigma factor,
          stand-alone STAS domain) [Anoxybacillus flavithermus
          WK1]
 gi|212560323|gb|ACJ33378.1| Stage II sporulation protein AA (antagonist of anti-sigma factor,
          stand-alone STAS domain) [Anoxybacillus flavithermus
          WK1]
          Length = 118

 Score = 36.4 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 42/84 (50%), Gaps = 4/84 (4%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60
            + + R AG        ++  ++   + +  +  + +++L+ +T +D+ G  +I+    
Sbjct: 13 QHVLLVRLAGELDHHTAEQLRAEITDVLERE-RIKAIVLNLNELTFMDSSGLGVILGRYK 71

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSL 84
           +++  G++ +  VS  I++LF +
Sbjct: 72 QIQRMGGEMVVCSVSPSIKRLFDM 95


>gi|24215134|ref|NP_712615.1| anti-sigma factor antagonist [Leptospira interrogans serovar Lai
          str. 56601]
 gi|45657389|ref|YP_001475.1| anti-sigma factor antagonist [Leptospira interrogans serovar
          Copenhageni str. Fiocruz L1-130]
 gi|24196200|gb|AAN49633.1| anti-sigma factor antagonist [Leptospira interrogans serovar Lai
          str. 56601]
 gi|45600628|gb|AAS70112.1| anti-sigma factor antagonist [Leptospira interrogans serovar
          Copenhageni str. Fiocruz L1-130]
          Length = 109

 Score = 36.4 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 37/88 (42%), Gaps = 4/88 (4%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MY 60
          N   +    GN       +I    +  I K+  S   ++DLS++  I + G  +I   + 
Sbjct: 9  NHSKIIHLIGNLDVHNTHKIESAFMEQI-KTGNSRVIVLDLSSVEFISSAGLRIIVAALR 67

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFT 88
             +   + +L G+   ++++F +I   
Sbjct: 68 ICREKDVEFRLAGIKPAVKKVFEIIDMN 95


>gi|260778740|ref|ZP_05887632.1| anti-anti-sigma regulatory factor [Vibrio coralliilyticus ATCC
          BAA-450]
 gi|260604904|gb|EEX31199.1| anti-anti-sigma regulatory factor [Vibrio coralliilyticus ATCC
          BAA-450]
          Length = 105

 Score = 36.4 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 35/86 (40%), Gaps = 5/86 (5%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          N I   +  GN  +   S  A   +  I    Q     +D   +  +D+ G   ++Y  +
Sbjct: 10 NEILTLQIDGNLDADG-SRYAQQHIDEIIAD-QHGEVEIDFRNVRFLDSSGVGALVYLYK 67

Query: 64 KY---HGKIKLQGVSTHIEQLFSLIS 86
          +      +++++ V+    ++ +L+ 
Sbjct: 68 RLVERERQMRIENVTGQPLEIINLLR 93


>gi|300870194|ref|YP_003785065.1| anti sigma factor antagonist [Brachyspira pilosicoli 95/1000]
 gi|300687893|gb|ADK30564.1| anti sigma factor antagonist [Brachyspira pilosicoli 95/1000]
          Length = 111

 Score = 36.4 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 43/85 (50%), Gaps = 5/85 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          EN  +V +  G+      S++ D +   I+    +   I+D+  +  ID+ G  + ++ +
Sbjct: 9  ENNTSVIKLVGDIDVYTSSDLKDAINSQID--FGAKRIIIDMEDVYYIDSSGIGVFVFAI 66

Query: 63 ---EKYHGKIKLQGVSTHIEQLFSL 84
             ++ +GKI +  ++ ++ ++F L
Sbjct: 67 GSFKRVNGKIGIVKITENVRKVFEL 91


>gi|290955484|ref|YP_003486666.1| anti-anti-sigma-factor [Streptomyces scabiei 87.22]
 gi|260645010|emb|CBG68096.1| putative anti-anti-sigma-factor [Streptomyces scabiei 87.22]
          Length = 127

 Score = 36.4 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 30/97 (30%), Gaps = 5/97 (5%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           ++ G TV    G        EI   +  A   S      ++DL  +   D  G  L+   
Sbjct: 17  TDRGRTVLELHGEIDIAAAVEIIPHLDAAT--SGPGARIVIDLRHVEFFDCSGLRLLYRA 74

Query: 62  MEK---YHGKIKLQGVSTHIEQLFSLISFTHRKKIKN 95
            ++     G+++L        ++  +           
Sbjct: 75  RQRVLDRDGELRLVCTHPLTLRVLKVTGLARLLPPAP 111


>gi|78050010|ref|YP_366185.1| hypothetical protein XCV4454 [Xanthomonas campestris pv.
          vesicatoria str. 85-10]
 gi|78038440|emb|CAJ26185.1| conserved hypothetical protein [Xanthomonas campestris pv.
          vesicatoria str. 85-10]
          Length = 91

 Score = 36.4 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 9/90 (10%), Positives = 31/90 (34%), Gaps = 7/90 (7%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66
               G      ++      +  ++      +  +DLS +  +D+ G  ++     +   
Sbjct: 7  TLVITGVLDRAAVTAAWPQAIAQLD-----GARTLDLSGVQRLDSAGVAMLAELAARLRQ 61

Query: 67 -GKIKLQGVSTHIEQLFSLISFTHRKKIKN 95
           G   + G ++ +++L +    +     + 
Sbjct: 62 AGSGAVVGEASGLDELRAAYRLSPTLDFQA 91


>gi|284990742|ref|YP_003409296.1| hypothetical protein Gobs_2242 [Geodermatophilus obscurus DSM
           43160]
 gi|284063987|gb|ADB74925.1| hypothetical protein Gobs_2242 [Geodermatophilus obscurus DSM
           43160]
          Length = 116

 Score = 36.4 bits (83), Expect = 7.4,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 34/86 (39%), Gaps = 9/86 (10%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E+   V    G+   P + ++  + V       + +   V ++++  ID+ G  L++ + 
Sbjct: 23  EDAGPVLHLLGDVDGPLVGQLRAEGVD------ERELVAVHVASVGYIDSAGLSLLVRWA 76

Query: 63  EKYHGKIK---LQGVSTHIEQLFSLI 85
           +      +   L+  S    ++  L 
Sbjct: 77  QSAARDGRPAVLRHASPRFREVLDLA 102


>gi|148273908|ref|YP_001223469.1| hypothetical protein CMM_2724 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147831838|emb|CAN02808.1| unnamed protein product [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 112

 Score = 36.4 bits (83), Expect = 7.4,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 39/104 (37%), Gaps = 6/104 (5%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---M 59
           E+ +TV   AG        E+   +  A+  +      +VDL+ +  ID+ G   +   +
Sbjct: 11  EDDVTVVTAAGMLNMAAAPELRQAIHDALEPA--PARIVVDLAGVDFIDSSGLGALIAGL 68

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFF 103
                  G +++      ++ +  L S   R  I     + ++ 
Sbjct: 69  RSARDAGGDLRISAPGPQVQMVLQL-SNLDRVLISTPTAEAAYR 111


>gi|317132445|ref|YP_004091759.1| anti-sigma-factor antagonist [Ethanoligenens harbinense YUAN-3]
 gi|315470424|gb|ADU27028.1| anti-sigma-factor antagonist [Ethanoligenens harbinense YUAN-3]
          Length = 101

 Score = 36.4 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 38/87 (43%), Gaps = 4/87 (4%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59
          ++  +      G         + +++  +I ++ +  +  +D   +T +D+ G  L+M  
Sbjct: 7  NDAHVLTVYLDGEIDHHAAQNLREEIDTSIERA-RPSALALDFRGVTFMDSSGIGLVMGR 65

Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLI 85
             M+ + G + ++  S HI ++  L 
Sbjct: 66 YRAMQPFGGIVTVKNASMHIRKVMRLA 92


>gi|218289602|ref|ZP_03493822.1| anti-sigma-factor antagonist [Alicyclobacillus acidocaldarius
          LAA1]
 gi|258511713|ref|YP_003185147.1| anti-sigma-factor antagonist [Alicyclobacillus acidocaldarius
          subsp. acidocaldarius DSM 446]
 gi|218240252|gb|EED07435.1| anti-sigma-factor antagonist [Alicyclobacillus acidocaldarius
          LAA1]
 gi|257478439|gb|ACV58758.1| anti-sigma-factor antagonist [Alicyclobacillus acidocaldarius
          subsp. acidocaldarius DSM 446]
          Length = 114

 Score = 36.4 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 36/85 (42%), Gaps = 4/85 (4%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
          E GI V    G      + ++ D +   + +       ++    I  +D+ G  LI+   
Sbjct: 8  ERGIVVIELKGELDHHAVEQMRDRIEQQLAEH-GYRGLVMSFRNIDFMDSSGLGLILGRY 66

Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSL 84
            + ++ GK+ L  V+  + +LF +
Sbjct: 67 RSVSEHGGKMALCEVNPTLRRLFEM 91


>gi|154148769|ref|YP_001406662.1| Na+/Pi-cotransporter [Campylobacter hominis ATCC BAA-381]
 gi|153804778|gb|ABS51785.1| Na+/Pi-cotransporter [Campylobacter hominis ATCC BAA-381]
          Length = 593

 Score = 36.4 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 71/192 (36%), Gaps = 9/192 (4%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   I   ++    D  ++    GL I+    F  +    K   L+    +    +S   
Sbjct: 135 MPIFIFGAVLALFKDEKTKGA--GLFIAGVALFFLAIAYMKDGFLNFKSTIE---LSKYA 189

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +  ++  +  A+I       L    A I ++ L ++   +       ++ I    GS I 
Sbjct: 190 LSGVLGIIVYALIGVFITALLQSSHASI-TLALTALASSQITYENAVSITIGANLGSTIT 248

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A IGS+K+N E    + + +  +   ++  I  +++    L  +   + + G S      
Sbjct: 249 AIIGSLKVNNEA---KKLTITHIIFNLTTAILTILLFNVFLKAVDISADLFGISQDDNIL 305

Query: 290 YDIPFAVFFSRF 301
               F  +F+ F
Sbjct: 306 KLAIFQSYFNIF 317


>gi|320107759|ref|YP_004183349.1| anti-anti-sigma factor [Terriglobus saanensis SP1PR4]
 gi|319926280|gb|ADV83355.1| anti-anti-sigma factor [Terriglobus saanensis SP1PR4]
          Length = 115

 Score = 36.4 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 39/84 (46%), Gaps = 4/84 (4%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF-- 61
          +GITV   +G     E S    D +  +    Q  S +++L  ++ +D+ G   ++    
Sbjct: 11 DGITVLDLSGRITLGEGSVTLRDAIRDLINKGQ-KSILLNLGDVSYLDSSGLGELVTAYT 69

Query: 62 -MEKYHGKIKLQGVSTHIEQLFSL 84
           ++   G++KL  ++  ++ L  +
Sbjct: 70 SVKNSGGELKLLNLTKKVQDLLQI 93


>gi|228919420|ref|ZP_04082787.1| hypothetical protein bthur0011_4460 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228840251|gb|EEM85525.1| hypothetical protein bthur0011_4460 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 404

 Score = 36.4 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 25/71 (35%), Gaps = 2/71 (2%)

Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325
           S P L I      +IG    I     +   +F SR        N+F   I     A AIG
Sbjct: 247 STPTLNIQYVLGKLIGIIFAI--LMQMAAVIFISRIIFQMNWGNLFDIFIITTVYAFAIG 304

Query: 326 IVAMKEGFAVG 336
            V +  GF   
Sbjct: 305 SVILFWGFTAK 315


>gi|196233315|ref|ZP_03132160.1| anti-sigma-factor antagonist [Chthoniobacter flavus Ellin428]
 gi|196222620|gb|EDY17145.1| anti-sigma-factor antagonist [Chthoniobacter flavus Ellin428]
          Length = 108

 Score = 36.4 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 37/90 (41%), Gaps = 5/90 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          +N   +    G        ++ + +   +++ +     +VD S +T ID+ G   ++  +
Sbjct: 6  QNQTGILALEGEIDLHRSPQVKETLEPLVSQKV--PRILVDFSQVTYIDSSGLATMIETL 63

Query: 63 EK---YHGKIKLQGVSTHIEQLFSLISFTH 89
          ++   Y GK  + G+   +  +F +     
Sbjct: 64 QRIQSYGGKFAMFGLRDSVRNIFEIARLDQ 93


>gi|163803757|ref|ZP_02197614.1| putative anti-sigma B factor antagonist [Vibrio sp. AND4]
 gi|159172441|gb|EDP57310.1| putative anti-sigma B factor antagonist [Vibrio sp. AND4]
          Length = 107

 Score = 36.4 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 10/82 (12%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLS--AITEIDTIGAELIMYFME-- 63
          + +  G      +  +      A+ +  Q     ++ S   I  ID+ G  ++++ +E  
Sbjct: 14 ILKLTGALDRDSVPTLW-----AVAQQWQPAQTELECSLEEIERIDSAGMVMLIHLLEHA 68

Query: 64 -KYHGKIKLQGVSTHIEQLFSL 84
           K +  I L  V   +  LF L
Sbjct: 69 KKQNCHIMLSFVPAQLRTLFQL 90


>gi|237809663|ref|YP_002894103.1| anti-anti-sigma factor family protein [Tolumonas auensis DSM
          9187]
 gi|237501924|gb|ACQ94517.1| anti-anti-sigma factor family protein [Tolumonas auensis DSM
          9187]
          Length = 86

 Score = 36.4 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 38/78 (48%), Gaps = 9/78 (11%)

Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EKYH 66
          +  GN  + +++++         ++       +D+S++ +ID+ G   ++ +    +  +
Sbjct: 2  KLTGNLDAVQVTQLWPGREELFRQN------ELDVSSVNKIDSAGVAFLVKWAQACQATN 55

Query: 67 GKIKLQGVSTHIEQLFSL 84
           ++ +QG S  + QL SL
Sbjct: 56 QRLLVQGASPELVQLISL 73


>gi|86160180|ref|YP_466965.1| anti-sigma-factor antagonist domain-containing protein
          [Anaeromyxobacter dehalogenans 2CP-C]
 gi|197124207|ref|YP_002136158.1| sulfate transporter/antisigma-factor antagonist STAS
          [Anaeromyxobacter sp. K]
 gi|220918987|ref|YP_002494291.1| Sulfate transporter/antisigma-factor antagonist STAS
          [Anaeromyxobacter dehalogenans 2CP-1]
 gi|85776691|gb|ABC83528.1| anti-sigma-factor antagonist (STAS) domain protein
          [Anaeromyxobacter dehalogenans 2CP-C]
 gi|196174056|gb|ACG75029.1| Sulfate transporter/antisigma-factor antagonist STAS
          [Anaeromyxobacter sp. K]
 gi|219956841|gb|ACL67225.1| Sulfate transporter/antisigma-factor antagonist STAS
          [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 100

 Score = 36.4 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 8/80 (10%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          +++ +TV R  G     E+S IA     A +   +    +VDL  +T +   GA L+   
Sbjct: 6  NQDEVTVIRCVGELTRDELSAIAGLAQRARH---EGRMVVVDLKRVTHLHYAGAALL--- 59

Query: 62 MEKYHGKIKLQGVSTHIEQL 81
            K    ++  G S ++  L
Sbjct: 60 --KAIPGLRAAGASRYVRDL 77


>gi|119357623|ref|YP_912267.1| anti-sigma-factor antagonist [Chlorobium phaeobacteroides DSM
          266]
 gi|119354972|gb|ABL65843.1| anti-sigma-factor antagonist [Chlorobium phaeobacteroides DSM
          266]
          Length = 115

 Score = 36.4 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 35/85 (41%), Gaps = 7/85 (8%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
          ITV    G       S +   +    + S+  D  ++DL+ +  +D+ G   ++    K 
Sbjct: 11 ITVVALQG--TLDSSSSV--QLHNYTSPSVTEDPLVIDLTNLNFLDSSGLGALVEIARKK 66

Query: 66 HGK---IKLQGVSTHIEQLFSLISF 87
            K   +KL  ++  + ++F +   
Sbjct: 67 REKGSDVKLACMNEKVRKVFEITQA 91


>gi|307353526|ref|YP_003894577.1| glycosyl transferase family 2 protein [Methanoplanus petrolearius
           DSM 11571]
 gi|307156759|gb|ADN36139.1| glycosyl transferase family 2 [Methanoplanus petrolearius DSM
           11571]
          Length = 385

 Score = 36.4 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 30/76 (39%), Gaps = 5/76 (6%)

Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318
           R   L   LP L I   F  I+GA ++   Y +       S  HS    + +F G ++A 
Sbjct: 229 RFMLLYQPLPFLAIPGFFFFIMGAVLMAIYYLEGNLEN--SNLHSFVLASILFIGGLQAI 286

Query: 319 FMACAI---GIVAMKE 331
            M   I    I+A   
Sbjct: 287 LMGINIKTYSIIAGYN 302


>gi|239926725|ref|ZP_04683678.1| anti-sigma factor antagonist [Streptomyces ghanaensis ATCC 14672]
 gi|291435042|ref|ZP_06574432.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
 gi|291337937|gb|EFE64893.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
          Length = 139

 Score = 36.4 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 11/94 (11%), Positives = 36/94 (38%), Gaps = 9/94 (9%)

Query: 16  KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFMEKYHGKIKLQ 72
            + ++++    +++         S ++DLS +T +D+ G   ++           ++ L 
Sbjct: 51  TAHQLADALQPLLLT-----DGHSVLLDLSGVTFLDSTGLTCLIAAYRTARTNGARLVLI 105

Query: 73  GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106
             S  +  + +L +   +       P     +++
Sbjct: 106 APSERVRHMLAL-TGVDQVLRSYPTPDSVPDWSA 138


>gi|262193533|ref|YP_003264742.1| anti-sigma-factor antagonist [Haliangium ochraceum DSM 14365]
 gi|262076880|gb|ACY12849.1| anti-sigma-factor antagonist [Haliangium ochraceum DSM 14365]
          Length = 103

 Score = 36.4 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 36/89 (40%), Gaps = 6/89 (6%)

Query: 2  SENGI-TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           +NG  T     G        E++  +   + +  +    +VDLS +  ID+ G   ++ 
Sbjct: 10 EDNGDDTTISITGKLDVLTAPEMSTLIDGLVAE--KRRKVVVDLSGLDLIDSSGVAALVG 67

Query: 61 FMEKYH---GKIKLQGVSTHIEQLFSLIS 86
            ++     G + ++G+      +F L+ 
Sbjct: 68 MYKRVRAEGGDVTIRGIRDQPLAIFKLLR 96


>gi|188532483|ref|YP_001906280.1| Anti-sigma B factor antagonist [Erwinia tasmaniensis Et1/99]
 gi|188027525|emb|CAO95372.1| Anti-sigma B factor antagonist [Erwinia tasmaniensis Et1/99]
          Length = 98

 Score = 36.4 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 10/71 (14%), Positives = 32/71 (45%), Gaps = 6/71 (8%)

Query: 20 ISEIADDVVMAI---NKSIQSDSAIVDLSAITEIDTIGAELIMYFME---KYHGKIKLQG 73
          I E+  + ++ +    + +      +D+S +  +D+ G  L+++  +    +    +  G
Sbjct: 17 IGELERETLLPLWQQREQVMEHVESIDVSGLERVDSGGLALLVHLRQIAILHGRNPRFTG 76

Query: 74 VSTHIEQLFSL 84
          ++  +  L +L
Sbjct: 77 INDRLNSLIAL 87


>gi|162454601|ref|YP_001616968.1| anti-anti sigma factor protein [Sorangium cellulosum 'So ce 56']
 gi|161165183|emb|CAN96488.1| anti-anti sigma factor protein [Sorangium cellulosum 'So ce 56']
          Length = 350

 Score = 36.4 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 36/82 (43%), Gaps = 4/82 (4%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +GI      G   +   + I + ++ AI  + Q++  I+D++ +  +D  GA  +   + 
Sbjct: 213 DGILALPLIGQIDAERAARILEVLLQAIVDT-QAEHVIIDVTGVPFMDAEGARHLRDTVR 271

Query: 64  K---YHGKIKLQGVSTHIEQLF 82
                  +  + G+S  + +L 
Sbjct: 272 ASSLLGAQCVIAGISPAMARLL 293


>gi|225438978|ref|XP_002284329.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|147768860|emb|CAN78136.1| hypothetical protein VITISV_034055 [Vitis vinifera]
          Length = 309

 Score = 36.4 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 47/281 (16%), Positives = 91/281 (32%), Gaps = 46/281 (16%)

Query: 9   FRFAGNWKSPEISEIA------DDVVMAINKSIQSDSAIVDLSAITEID----TIGAELI 58
            R +  W +   + +       +  V  I  SI       D   I   D    T+    +
Sbjct: 7   VRASSAWVAARSAHVVVDSSGIEKAVEEIQDSI--PKVKWDFEGIHYFDNGPLTVQYLFV 64

Query: 59  MYFMEK-YHGKIKLQ------GVSTHIEQLFSLISFTHRKKIKNQK-------PQRSFFY 104
           +  +   +     L       G+   ++   S+      +KI   +       P+     
Sbjct: 65  LDALNFCFWPDKDLSYDHLALGLKEALQNDKSVFDSDRLQKITGPQLRELLKWPRPLPLE 124

Query: 105 NSFKNLHYHIGKKIVKFINDSCS-QAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYY 162
           N    L + +G ++ +      S      G   +N        +  F+   +    Q++ 
Sbjct: 125 NERVRLLHEVGLELERSFEGKASKLVESCGKSAANLVALVTRHFPGFRDHSVYKGHQVFL 184

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL-----LTA 217
              + +    L     G     QG  + +   +     D +    LR++GVL     L +
Sbjct: 185 YKRAQIFAADLWGAFEG-----QGYGEFNDISSITIFADYIVPAVLRQLGVLRYSSDLAS 239

Query: 218 VMIAGRSGSAIVAEIGSMKINE-EIDAIRTMGLDFVRILIS 257
           ++ A R       EIGS    E E+ A     ++ +R L+S
Sbjct: 240 IIEANR-------EIGSGSEEEVELRACSIYAVEKMRELLS 273


>gi|239930616|ref|ZP_04687569.1| anti anti sigma factor [Streptomyces ghanaensis ATCC 14672]
          Length = 126

 Score = 36.4 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 5/73 (6%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59
           + G  V R +G       S +   V  A+       S ++DLS +   D+ G  +++  
Sbjct: 11 EQGGWAVLRVSGELDLLTSSVLRQRVHDAVAD--GRHSLVLDLSDVWFCDSSGVGVLIAA 68

Query: 60 -YFMEKYHGKIKL 71
             +    G ++L
Sbjct: 69 RRLLRSCQGTLRL 81


>gi|53803966|ref|YP_114399.1| STAS domain-containing protein [Methylococcus capsulatus str.
          Bath]
 gi|53757727|gb|AAU92018.1| STAS domain protein [Methylococcus capsulatus str. Bath]
          Length = 120

 Score = 36.4 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 23/64 (35%), Gaps = 3/64 (4%)

Query: 24 ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MYFMEKYHGKIKLQGVSTHIEQ 80
             +   +      +   +DL  +   D+ G  L+   +    K    ++L+ +   +E 
Sbjct: 33 PAALKETLPLFRTRNGVAIDLRGVERADSAGIALLIEWVRLARKRGVSLRLENMPAQVEN 92

Query: 81 LFSL 84
          L  +
Sbjct: 93 LVRV 96


>gi|332172343|gb|AEE21597.1| anti-sigma-factor antagonist [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 110

 Score = 36.4 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 20/61 (32%), Gaps = 1/61 (1%)

Query: 9  FRFAGNWKSPEISEIADDVVMAIN-KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
          F  +G+     +     + +  +           +DL  +  IDT G   IM  +     
Sbjct: 21 FVLSGSLNRDTVPYFWRNSLQQLASAQSDDKPLTLDLHNVGHIDTAGLAWIMNLIRDTKQ 80

Query: 68 K 68
          K
Sbjct: 81 K 81


>gi|220919629|ref|YP_002494932.1| hypothetical protein Mnod_8294 [Methylobacterium nodulans ORS 2060]
 gi|219952049|gb|ACL62440.1| hypothetical protein Mnod_8294 [Methylobacterium nodulans ORS 2060]
          Length = 235

 Score = 36.4 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 36/115 (31%), Gaps = 10/115 (8%)

Query: 49  EIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFK 108
            +DT     +   +       +  G   ++  L   I+     +    +P   F   +F 
Sbjct: 82  ALDTA----LRRTIRALWRTCRYPGDPPYLAGLLHQIAV---GRFDPHRPPWLFHPATFD 134

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
                IG++ V     +     ++       G    +S   +  L+   RQ+  +
Sbjct: 135 AAFRRIGRRTVGGGPKTAPANELVFRGNLGAGILFLTS---RVRLIDRRRQIAPI 186


>gi|299773132|gb|ADJ38646.1| accelerated cell death 6 [Arabidopsis thaliana]
          Length = 673

 Score = 36.4 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 26/78 (33%), Gaps = 6/78 (7%)

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIW-KYYDIPFAVFFSRFHSTATLANIFTG 313
           +   +   + IS+           I+G  +++   Y      +F   F  T  ++  F G
Sbjct: 598 IAHVKWLLVTISIISGGFFLCAIFILGPHVMLQRSYLPPSSGIFLKTFMLTIDISEFFVG 657

Query: 314 LIKAPFMACAIGIVAMKE 331
           LIK     C     A   
Sbjct: 658 LIK-TCFGCE----ACYF 670


>gi|297564459|ref|YP_003683432.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296848908|gb|ADH70926.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 123

 Score = 36.4 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 37/89 (41%), Gaps = 5/89 (5%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFMEK 64
           +    G       +++ + +  A+         I+DLSA+  +D+ G  +I+     + +
Sbjct: 16  IVAIEGELDIATAADLQEHIQSAVEDH--GPWLILDLSALDFMDSSGLNVIINAYRTVRE 73

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
             G + L  ++  + ++  L+    +  +
Sbjct: 74  LGGSLALAALNERVTKVVRLVGLHRQVPV 102


>gi|149915483|ref|ZP_01904010.1| anti-anti-sigma factor [Roseobacter sp. AzwK-3b]
 gi|149810772|gb|EDM70613.1| anti-anti-sigma factor [Roseobacter sp. AzwK-3b]
          Length = 112

 Score = 36.4 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 39/69 (56%), Gaps = 3/69 (4%)

Query: 18 PEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH--GKIKLQGVS 75
            ++    D++ ++ ++   D  I+DLSA+T ID+ G   ++  +++     +++L G++
Sbjct: 23 SGVAIRFKDLMRSLTET-GPDHVILDLSAVTFIDSSGLGALVGALKQMPTGKRLELAGLT 81

Query: 76 THIEQLFSL 84
            + ++F L
Sbjct: 82 RDVAKVFRL 90


>gi|119717160|ref|YP_924125.1| sulphate transporter [Nocardioides sp. JS614]
 gi|119537821|gb|ABL82438.1| sulphate transporter [Nocardioides sp. JS614]
          Length = 508

 Score = 36.4 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 27/83 (32%), Gaps = 3/83 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E+     R  G         +   +   I +    D  ++ L  I  +D  GA ++   +
Sbjct: 410 EDATLHLRPTGVLYFGSAPALERSISRLIAEHPSVDRVVLHLDRIGRLDLTGALMLRDIL 469

Query: 63  ---EKYHGKIKLQGVSTHIEQLF 82
              E      +++G   H   L 
Sbjct: 470 ADAESAGRTFEIRGARAHAAGLL 492


>gi|255965556|gb|ACU45082.1| unknown [Pfiesteria piscicida]
          Length = 307

 Score = 36.4 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 40/113 (35%), Gaps = 7/113 (6%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           +     ++   AG W+   + E+  +    + +    D   +D +A+       A  +  
Sbjct: 126 VGMGQRSLRHLAGIWQREPVPEVRLENEQLLGRIHIVDPCPIDRAAL-------AVFLRR 178

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYH 113
            +++      L  V      L  L + T  +K+ ++    SFF     N  Y 
Sbjct: 179 RLQRIPLPGSLARVDAEAANLPELATRTGPEKVADEHAHTSFFPCLIMNAAYD 231


>gi|71279214|ref|YP_271180.1| STAS domain-containing protein [Colwellia psychrerythraea 34H]
 gi|71144954|gb|AAZ25427.1| STAS domain protein [Colwellia psychrerythraea 34H]
          Length = 100

 Score = 36.4 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 31/80 (38%), Gaps = 6/80 (7%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66
              +G      ++ I +             +  VDLS ++++DT G   + Y +E+   
Sbjct: 12 TLTVSGQLSRHSVAHIKN---SEYVNWFAHGAINVDLSDVSKVDTAGLAWLFYLLEQAAH 68

Query: 67 --GKIKLQGVSTHIEQLFSL 84
             ++    +   + +L +L
Sbjct: 69 HSCQLSFSNIPEKLTKLITL 88


>gi|323702538|ref|ZP_08114201.1| anti-sigma-factor antagonist [Desulfotomaculum nigrificans DSM
          574]
 gi|323532512|gb|EGB22388.1| anti-sigma-factor antagonist [Desulfotomaculum nigrificans DSM
          574]
          Length = 112

 Score = 36.0 bits (82), Expect = 8.5,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 42/85 (49%), Gaps = 10/85 (11%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSI---QSDSAIVDLSAITEIDTIGAELIMYFM 62
            + R  G         +AD++ +A++K +   ++   I++LS +T ID+ G  +I+   
Sbjct: 11 TLLVRLGGELDL----GVADELRLALDKLLHEKKAKHLILNLSRVTFIDSSGLGVILGRY 66

Query: 63 EKY---HGKIKLQGVSTHIEQLFSL 84
          ++     G+I L G    ++++  L
Sbjct: 67 KRLVQQGGQIILVGAQPPVKRILEL 91


>gi|255526138|ref|ZP_05393059.1| anti-sigma-factor antagonist [Clostridium carboxidivorans P7]
 gi|296187148|ref|ZP_06855545.1| anti-sigma F factor antagonist [Clostridium carboxidivorans P7]
 gi|255510187|gb|EET86506.1| anti-sigma-factor antagonist [Clostridium carboxidivorans P7]
 gi|296048183|gb|EFG87620.1| anti-sigma F factor antagonist [Clostridium carboxidivorans P7]
          Length = 111

 Score = 36.0 bits (82), Expect = 8.5,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 37/86 (43%), Gaps = 4/86 (4%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          S++G  +   +G        E+ + +   +++       I+D S +  +D+ G  +++  
Sbjct: 7  SKDGKLIVHMSGELDHHSAEEVRNKIDDRLDRDNIGK-LIMDFSDVNFMDSSGIGVVIGR 65

Query: 62 MEKY---HGKIKLQGVSTHIEQLFSL 84
           +K     G I +      ++++F L
Sbjct: 66 YKKLMSKKGNICITKADGSVKRVFEL 91


>gi|170717847|ref|YP_001784906.1| hypothetical protein HSM_1586 [Haemophilus somnus 2336]
 gi|168825976|gb|ACA31347.1| conserved hypothetical protein [Haemophilus somnus 2336]
          Length = 94

 Score = 36.0 bits (82), Expect = 8.5,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 30/86 (34%), Gaps = 4/86 (4%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKS-IQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
            R  G      +          ++ + +     + +LS +  ID+ G  L+  F+ +  
Sbjct: 2  TLRIMGALSRDTLLPFLQQRDELLSSAELVGQQLVWELSEVNRIDSAGFALLGDFINELE 61

Query: 67 GKI---KLQGVSTHIEQLFSLISFTH 89
           ++   K+      +E L  L   + 
Sbjct: 62 KQVSSQKIHNAPIQLEILADLFGLSD 87


>gi|326429647|gb|EGD75217.1| diphthine synthase [Salpingoeca sp. ATCC 50818]
          Length = 1126

 Score = 36.0 bits (82), Expect = 8.6,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 29/71 (40%), Gaps = 2/71 (2%)

Query: 22   EIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK-YHGKIKLQGVSTHIEQ 80
            ++  +    + K  +  +    L  +  +DT+G  LI    +K +  +++   ++   + 
Sbjct: 1007 DLPAEKRAHVRKVAREAARRRKLKQVERMDTLG-MLISRLEQKHHWLRMEKASLAADRQC 1065

Query: 81   LFSLISFTHRK 91
            L + I    R 
Sbjct: 1066 LINRIREKLRS 1076


>gi|195018626|ref|XP_001984818.1| GH14820 [Drosophila grimshawi]
 gi|193898300|gb|EDV97166.1| GH14820 [Drosophila grimshawi]
          Length = 465

 Score = 36.0 bits (82), Expect = 8.7,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 58/164 (35%), Gaps = 8/164 (4%)

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF---VRILISPRIWALIISLPLLT 271
           + AV++     S +   +  M    +I A+    +D      I+ S +I    +S  L  
Sbjct: 272 MAAVIVIANQFSGLFTMLNYM---SDIFAMSGSSMDPNTSTIIIGSVQILGAYVSTILCD 328

Query: 272 ILA-NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330
           +       ++ +  V        F   F+  +       +   ++        IG+++  
Sbjct: 329 VFGRKILMLVSSGGVALSLTAFGFFTHFAGIYDLTDWGWVPVAIMSMDIFLGNIGLISCL 388

Query: 331 EGFAVGVHSNSL-GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
               V +    +  +  +  +V   S+V ++ ++F +     G+
Sbjct: 389 FVLMVEMFPLKIRARATSIAIVVCSSLVFLMLNIFPLCMAKWGL 432


>gi|167767629|ref|ZP_02439682.1| hypothetical protein CLOSS21_02162 [Clostridium sp. SS2/1]
 gi|167710646|gb|EDS21225.1| hypothetical protein CLOSS21_02162 [Clostridium sp. SS2/1]
 gi|291560767|emb|CBL39567.1| diguanylate cyclase (GGDEF) domain [butyrate-producing bacterium
           SSC/2]
          Length = 450

 Score = 36.0 bits (82), Expect = 8.7,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 26/79 (32%), Gaps = 2/79 (2%)

Query: 249 LDFVRI--LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +D + +     P + A  +  PL + L      + +       Y +     FS  +S   
Sbjct: 36  IDPISLTTAYIPIVVAGCLLGPLESTLIGLVFGLASMYKASALYVVSDDKIFSPLYSGNP 95

Query: 307 LANIFTGLIKAPFMACAIG 325
           + +I   +         IG
Sbjct: 96  IGSILLSVGSRVLFGFVIG 114


>gi|74318558|ref|YP_316298.1| hypothetical protein Tbd_2540 [Thiobacillus denitrificans ATCC
           25259]
 gi|74058053|gb|AAZ98493.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
           25259]
          Length = 370

 Score = 36.0 bits (82), Expect = 8.8,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 8/84 (9%)

Query: 18  PEISEIADDVVMA-----INKSIQSDSAIVDLSAITEIDTIGA---ELIMYFMEKYHGKI 69
            E+  + D    A     I  + ++    +D S I  +D  GA     I+    K   K+
Sbjct: 141 LELPSLLDKAAAAMLHEGIGGAAKNAVVRIDFSRIEMVDESGAEECARILGAARKARRKL 200

Query: 70  KLQGVSTHIEQLFSLISFTHRKKI 93
           ++ GV   I  L  L+  TH + +
Sbjct: 201 QVSGVDRLIALLQDLLRATHSRAV 224


>gi|84387819|ref|ZP_00990834.1| Putative anti-sigma B factor antagonist [Vibrio splendidus 12B01]
 gi|86147569|ref|ZP_01065879.1| Putative anti-sigma B factor antagonist [Vibrio sp. MED222]
 gi|218710666|ref|YP_002418287.1| putative anti-sigma B factor antagonist [Vibrio splendidus LGP32]
 gi|84377334|gb|EAP94202.1| Putative anti-sigma B factor antagonist [Vibrio splendidus 12B01]
 gi|85834608|gb|EAQ52756.1| Putative anti-sigma B factor antagonist [Vibrio sp. MED222]
 gi|218323685|emb|CAV20014.1| putative anti-sigma B factor antagonist [Vibrio splendidus LGP32]
          Length = 102

 Score = 36.0 bits (82), Expect = 8.8,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 14/85 (16%)

Query: 14 NWKSPE------ISEIADDVVMAINKSIQS-----DSAIVDLSAITEIDTIGAELIMYFM 62
           W++        + +I  D V AI + ++       S  +DLS I  +D+ G  ++++ +
Sbjct: 5  QWQALSSKEYQLLGDIDRDSVPAIWRILEKWQTTESSVEIDLSHINRVDSAGMVMLIHLL 64

Query: 63 E---KYHGKIKLQGVSTHIEQLFSL 84
          E     +  I L  V   +  LF L
Sbjct: 65 EHAKNQNCHIMLSFVPEQLRTLFQL 89


>gi|329938574|ref|ZP_08287999.1| anti-sigma-factor antagonist [Streptomyces griseoaurantiacus M045]
 gi|329302547|gb|EGG46438.1| anti-sigma-factor antagonist [Streptomyces griseoaurantiacus M045]
          Length = 114

 Score = 36.0 bits (82), Expect = 8.8,   Method: Composition-based stats.
 Identities = 13/95 (13%), Positives = 32/95 (33%), Gaps = 2/95 (2%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G+ V    G        +      +     ++    +VDLS ++ +D+ G  + +   +
Sbjct: 14  DGVRVVSVRGE--IDNDGKDVLRQALLPADGMEPARLVVDLSGVSFMDSSGINVFVAAHQ 71

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
              G      ++   E +  ++       I    P
Sbjct: 72  AVTGTEGWVRIAAAQESVLRVLRLVGVDAIITCHP 106


>gi|316979573|gb|EFV62349.1| putative ATP synthase F0, A subunit [Trichinella spiralis]
          Length = 809

 Score = 36.0 bits (82), Expect = 8.8,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 71/226 (31%), Gaps = 51/226 (22%)

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
             V  V +                  Q    G+   S D + ++ +     + T + +  
Sbjct: 226 TAVRSVGISRFRCIFLPTG-GLFLYSQFRD-GSNELSSDTVRLIFI-----VFTCMAV-- 276

Query: 223 RSGSAIVAEIGSMKINEEIDAI-------RTMGLDFVRILISPRIWALI----------- 264
             G+A+ A +  M+  E+++++        +  +D V + +  +   +I           
Sbjct: 277 -VGTALFALLKQMRPEEQLESLLEYESDRESPSVDSVAVTMVKKRLTVIEEIVRTFKLLQ 335

Query: 265 -ISLPLLTILANFSAIIGASIVIWKYYDIPFA-VFFSRFHSTATLANIFTGLIKA----P 318
             ++  L ++  +S I+           + F   F         L  IF GL ++     
Sbjct: 336 SGNMICLVVVFLYSGILLTFWSGVYGTCLTFTRQFTVSTKVLLALNVIFVGLGESLGSGL 395

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVT---TCVVQ--SISIVII 359
                I  +             S+G+ V      VV   S  ++ +
Sbjct: 396 VFGLIISTI------------ESMGRPVVIILGAVVNVLSFFLIFL 429


>gi|315185595|gb|EFU19364.1| anti-sigma-factor antagonist [Spirochaeta thermophila DSM 6578]
          Length = 130

 Score = 36.0 bits (82), Expect = 8.8,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 36/115 (31%), Gaps = 5/115 (4%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61
           E    +    G     +   I D +     +       ++DL  +T ID+ G   ++Y  
Sbjct: 8   EKHSFILSLTGELDLYQAPRIKDMLQKVFPEH--PAKIVLDLDGLTYIDSSGIGALLYAY 65

Query: 62  --MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI 114
              ++      L  +   ++++  L    H   I     +      S  +    +
Sbjct: 66  SEAKRRDIAFYLVNLHGSVKRVIELTKLLHYFPIAPSLEEALHEEESSADPSEEM 120


>gi|182624553|ref|ZP_02952336.1| putative membrane protein [Clostridium perfringens D str. JGS1721]
 gi|177910361|gb|EDT72742.1| putative membrane protein [Clostridium perfringens D str. JGS1721]
          Length = 235

 Score = 36.0 bits (82), Expect = 8.8,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 65/171 (38%), Gaps = 17/171 (9%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +  +++I F+     +  G  + S   + ++   L     L  I  ++  ++++     +
Sbjct: 16  LFSIVIIGFLVVCFQSYIGYKETSIPSSALYVTGLDIFSSL--IFPVMITILVSL----S 69

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
              ++ +M I      +  +    +R +   +  A +I++ +  +LA    +    +   
Sbjct: 70  FYHDVENMGIQ-----LFILKGISIRKIFYSKWIAYVIAMIIYFLLAFSITVFFMVLRGI 124

Query: 288 KYYDIPFAVF------FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
              DI +  F               L+ I  G++K  F+   IG++A   G
Sbjct: 125 NIIDIFYNTFTYLIYSILSIILLVNLSFILYGVLKNYFIPILIGVIASIIG 175


>gi|167947403|ref|ZP_02534477.1| hypothetical protein Epers_13027 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 30

 Score = 36.0 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 7/28 (25%), Positives = 12/28 (42%)

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            +  T  VV S   V+++D +     F 
Sbjct: 2   SRATTRTVVHSALAVLMLDFVLTALMFG 29


>gi|158312886|ref|YP_001505394.1| anti-sigma-factor antagonist [Frankia sp. EAN1pec]
 gi|158108291|gb|ABW10488.1| anti-sigma-factor antagonist [Frankia sp. EAN1pec]
          Length = 142

 Score = 36.0 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 35/119 (29%), Gaps = 6/119 (5%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59
            E G    R AG      + E+   +  AI+         VD+  +   D  G  +++  
Sbjct: 16  GEGGNQTLRLAGTVDVRSVGELRMLLHNAIDA--GRGPLHVDVGGLELGDHAGVGVLLGG 73

Query: 60  -YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
                     + L   S  + +L + I    R       P R          H  +G  
Sbjct: 74  ARRARALGRTLVLVDASAALGRLLA-IDRLGRLLRVQIAPDRLTAVPPGAGGHGTVGHA 131


>gi|295103336|emb|CBL00880.1| anti-anti-sigma factor [Faecalibacterium prausnitzii SL3/3]
          Length = 107

 Score = 36.0 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 4/78 (5%)

Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFMEKYHG 67
           AG         +   +  A+  S    + I+DL  +  +D+ G  LI+           
Sbjct: 17 LAGEIDHDAAQSLRMQLDDAL-VSRSPRTLIIDLGGVGFMDSSGIGLILGRQRCARVLGT 75

Query: 68 KIKLQGVSTHIEQLFSLI 85
           ++LQ     ++++  L 
Sbjct: 76 TLRLQHAPAQLQKVLRLA 93


>gi|160944903|ref|ZP_02092130.1| hypothetical protein FAEPRAM212_02419 [Faecalibacterium prausnitzii
           M21/2]
 gi|158444087|gb|EDP21091.1| hypothetical protein FAEPRAM212_02419 [Faecalibacterium prausnitzii
           M21/2]
          Length = 321

 Score = 36.0 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 79/253 (31%), Gaps = 52/253 (20%)

Query: 40  AIVDLSAITEID-TIGA-----ELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
             +D +  T +D T G      ++ +       G++        ++Q    +     +  
Sbjct: 28  LAIDPAG-TYLDGTAGGAGHSRQIALRLDAAKGGRL------ISLDQDPDAVQTARSRLA 80

Query: 94  KNQKPQRSFFYNSFKNLHYHIG-KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGF 152
                     +         +G +KI   + D    +H L            +    +  
Sbjct: 81  GLPATVVQINFRYAGQALEQLGIEKINGALLDLGVSSHQLDDAARGFSYRADAPLDMR-- 138

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS-ILQLREI 211
                  M   G +        + +      ++ A  L  +G E ++  +   I++ RE 
Sbjct: 139 -------MSQQGETA-------ADLVNTESREELARILRDYGEEPYAWQIAGKIVEARET 184

Query: 212 GVLLTAVMIAGRSGSAI-----------------VAEIGSMKINEEIDAIRTMGLDFVRI 254
             +LT + +A    SA+                    I    +N E+DA+   GLD +  
Sbjct: 185 APILTTLQLADIVASAMPPAERRKNKNPSRRTFQALRIA---VNHELDALEE-GLDTIFD 240

Query: 255 LISPRIWALIISL 267
            ++P     +I+ 
Sbjct: 241 HLAPGGRLCVITF 253


>gi|296394898|ref|YP_003659782.1| MMPL domain-containing protein [Segniliparus rotundus DSM 44985]
 gi|296182045|gb|ADG98951.1| MMPL domain protein [Segniliparus rotundus DSM 44985]
          Length = 960

 Score = 36.0 bits (82), Expect = 9.1,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 45/118 (38%), Gaps = 10/118 (8%)

Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAV-FFSRFHSTATLANIFTGL-----IKA 317
           ++ +  LT++      +  S++         A+ F S    +  +     G+     I A
Sbjct: 790 VLLVAALTVIFTVVLFLLRSVIAAGVVIASVAISFLSTLGVSVLVWQHILGVQVHWSIPA 849

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS----IVIIIDSLFAIFYFAI 371
              A  I + A      V      +G  V T V++S++    +V     +FA+  F++
Sbjct: 850 AVFAVLIAVGADYNMLVVSRFKEEMGAGVRTGVIRSMTGTGAVVTTAGMVFAMTMFSM 907


>gi|146306600|ref|YP_001187065.1| hypothetical protein Pmen_1569 [Pseudomonas mendocina ymp]
 gi|145574801|gb|ABP84333.1| hypothetical protein Pmen_1569 [Pseudomonas mendocina ymp]
          Length = 108

 Score = 36.0 bits (82), Expect = 9.1,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 35/90 (38%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
               G+    E+ +  + ++ A+  S       +DL  + E+D+ GA+L++    +   +
Sbjct: 15  LALLGSLTIYEVRQAHEALLAALTGSAAGGHWQLDLGQLEELDSAGAQLLLALQRQLTQQ 74

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
                V +  +    L+     + +    P
Sbjct: 75  QTRLEVVSAADAPRELLEVLRLQSLLPTTP 104


>gi|302337831|ref|YP_003803037.1| anti-sigma-factor antagonist [Spirochaeta smaragdinae DSM 11293]
 gi|301635016|gb|ADK80443.1| anti-sigma-factor antagonist [Spirochaeta smaragdinae DSM 11293]
          Length = 116

 Score = 36.0 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 36/82 (43%), Gaps = 5/82 (6%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---M 62
          I +   +G+        + D V   I K +     +++L  +  +D+ G   +++    +
Sbjct: 11 IYIIDISGDMDLYNAHRLKDVVAKLIAKGVS--ELVINLEKVDYLDSSGVGALIHVFTQV 68

Query: 63 EKYHGKIKLQGVSTHIEQLFSL 84
          ++   ++++  V   +E++  L
Sbjct: 69 KQRELQMRITHVHGSVEKVIRL 90


>gi|326789168|ref|YP_004306989.1| hypothetical protein Clole_0029 [Clostridium lentocellum DSM 5427]
 gi|326539932|gb|ADZ81791.1| hypothetical protein Clole_0029 [Clostridium lentocellum DSM 5427]
          Length = 315

 Score = 36.0 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P + +I  V    +    A  +  FG  IF I + S    +     ++A++IA    S+
Sbjct: 220 LPFIGIIGSVILTFLGFFIAGIVGSFGVGIFIIGITSFFATQ-----ISALLIALGITSS 274

Query: 228 IVA 230
           I A
Sbjct: 275 ITA 277


>gi|168699825|ref|ZP_02732102.1| hypothetical protein GobsU_09893 [Gemmata obscuriglobus UQM 2246]
          Length = 127

 Score = 36.0 bits (82), Expect = 9.4,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 3/69 (4%)

Query: 19  EISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEKYHGKIKLQGVS 75
            + + A ++V+A  K    ++ IVDLSA+T   +     ++     +     ++ L GV+
Sbjct: 35  TLLQPAAEMVLAPLKEDPPNNIIVDLSAVTYFGSAFITFLLRCHHLLASRGSELVLAGVN 94

Query: 76  THIEQLFSL 84
            +I +L  +
Sbjct: 95  PNIRELLRI 103


>gi|319951120|ref|ZP_08024969.1| glutaminase [Dietzia cinnamea P4]
 gi|319435213|gb|EFV90484.1| glutaminase [Dietzia cinnamea P4]
          Length = 418

 Score = 36.0 bits (82), Expect = 9.5,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 32/81 (39%), Gaps = 5/81 (6%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSD-SAIVDLSAITEIDTIGAELIMYFM 62
           +G   FR  G          A+ V+  + +  +      +DLS ++ ++T    +++  M
Sbjct: 326 SGRRTFRLQGPMTFAS----AEQVLRRLAEIPEGPGEVTLDLSRVSSVNTSARRMLLEAM 381

Query: 63  EKYHGKIKLQGVSTHIEQLFS 83
            +   +    G++    +L  
Sbjct: 382 RRLSAEGHTVGLADPGRRLPE 402


>gi|167951067|ref|ZP_02538141.1| Anti-anti-sigma regulatory factor [Endoriftia persephone
          'Hot96_1+Hot96_2']
          Length = 109

 Score = 36.0 bits (82), Expect = 9.5,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 27/91 (29%), Gaps = 6/91 (6%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY- 60
             G +V    G             ++  +       + +VDLS +T ID+ G   ++  
Sbjct: 7  EREGFSVLYLTGEVDLSCSPNARKAILDCLQNK---RNLLVDLSEVTYIDSSGVASLVEG 63

Query: 61 --FMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
                      L  VS     +  L    H
Sbjct: 64 YQLSRTLELDFSLVRVSDAAMNVLRLARLDH 94


>gi|126347733|emb|CAJ89450.1| putative anti-sigma factor antagonist [Streptomyces ambofaciens
           ATCC 23877]
          Length = 119

 Score = 36.0 bits (82), Expect = 9.5,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 36/91 (39%), Gaps = 6/91 (6%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           + +G  V   +G         +   V  A          ++DLSA+T  D+ G  +++  
Sbjct: 15  TPSGTFVLEVSGELDHHTAQLLTHAVNDA---PFDDGGVVIDLSALTYCDSTGITVLIGA 71

Query: 62  MEK---YHGKIKLQGVSTHIEQLFSLISFTH 89
            ++       + L GV+    ++F+++    
Sbjct: 72  YQRSQATGSPLSLAGVNPDQMRVFTVVGLDQ 102


>gi|330809064|ref|YP_004353526.1| hypothetical protein PSEBR_a2246 [Pseudomonas brassicacearum
          subsp. brassicacearum NFM421]
 gi|327377172|gb|AEA68522.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
          brassicacearum NFM421]
          Length = 105

 Score = 36.0 bits (82), Expect = 9.6,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 3/54 (5%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
            +    G       +E  D ++        +    +DL  + E+DT G +L++
Sbjct: 9  RRILVLEGPLTIYTAAERKDLLLELFPL---AQEVEMDLGGVDEMDTAGLQLLV 59


>gi|308189081|ref|YP_003933212.1| Anti-sigma F factor antagonist [Pantoea vagans C9-1]
 gi|308059591|gb|ADO11763.1| Anti-sigma F factor antagonist [Pantoea vagans C9-1]
          Length = 101

 Score = 36.0 bits (82), Expect = 9.6,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 31/85 (36%), Gaps = 8/85 (9%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          E   +     G      +  +       I      D   +D++A+  +D+ G  L+++  
Sbjct: 8  EREASTLLLKGELDRDTLMSLWQQRETLIK-----DVDTIDVAALERVDSSGLALLVHLR 62

Query: 63 EKYHGK---IKLQGVSTHIEQLFSL 84
          E    +    +  G+S  +  L +L
Sbjct: 63 EIARAQGITPRFTGISDKLHSLITL 87


>gi|91975244|ref|YP_567903.1| GGDEF domain-containing protein [Rhodopseudomonas palustris BisB5]
 gi|91681700|gb|ABE38002.1| diguanylate cyclase/phosphodiesterase [Rhodopseudomonas palustris
           BisB5]
          Length = 905

 Score = 36.0 bits (82), Expect = 9.8,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 73/210 (34%), Gaps = 26/210 (12%)

Query: 12  AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKL 71
           +G W   E+S IAD      +K+  +    V+L   T +D  G  LI+      +     
Sbjct: 149 SGAWPVSELS-IADRAYFRAHKAGTAPRTTVELVRNT-LD--GGWLIVMAQRLTNANGDF 204

Query: 72  QGV------STHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
            G+        HIEQ  + +S      I     +  F      +    IG+ +   + + 
Sbjct: 205 LGIVSRSLTPAHIEQFLASVSLGGDSAISIHH-RDGFLMARHPHAEEIIGRNLRSGLAEE 263

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ- 184
                      +N      S    +  L+S         +  +P+V+  +  T   +A  
Sbjct: 264 LKMFD------ANVNVQLTSPVDGRDRLVSTY------ALKNLPIVVFSATTTDEALAAW 311

Query: 185 --QGAFQLSQFGAEIFSIDLMSILQLREIG 212
             Q    +S        + ++ +L +REIG
Sbjct: 312 RKQTRLLISAATISALVVSVILLLIIREIG 341


>gi|297561207|ref|YP_003680181.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp.
          dassonvillei DSM 43111]
 gi|296845655|gb|ADH67675.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp.
          dassonvillei DSM 43111]
          Length = 136

 Score = 36.0 bits (82), Expect = 9.9,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 32/84 (38%), Gaps = 4/84 (4%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF--- 61
          G+TV    G         + D ++ A + S + D  +VD+S +   D  G   ++     
Sbjct: 17 GVTVVPVHGEVDLATADRVRDRLLQAAHAS-RCDCLVVDMSGLDFFDASGVSALVAVYKS 75

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLI 85
          + +    + L   +    ++   +
Sbjct: 76 LTREGRHVVLAEPAPIAARVLEAL 99


  Database: nr
    Posted date:  May 13, 2011  4:10 AM
  Number of letters in database: 999,999,932
  Number of sequences in database:  2,987,209
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 13, 2011  4:17 AM
  Number of letters in database: 999,998,956
  Number of sequences in database:  2,896,973
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 13, 2011  4:23 AM
  Number of letters in database: 999,999,979
  Number of sequences in database:  2,907,862
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 13, 2011  4:29 AM
  Number of letters in database: 999,999,513
  Number of sequences in database:  2,932,190
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 13, 2011  4:33 AM
  Number of letters in database: 792,586,372
  Number of sequences in database:  2,260,650
  
Lambda     K      H
   0.314    0.154    0.426 

Lambda     K      H
   0.267   0.0473    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,998,392,756
Number of Sequences: 13984884
Number of extensions: 336677078
Number of successful extensions: 1625453
Number of sequences better than 10.0: 8501
Number of HSP's better than 10.0 without gapping: 4194
Number of HSP's successfully gapped in prelim test: 6374
Number of HSP's that attempted gapping in prelim test: 1612525
Number of HSP's gapped (non-prelim): 14345
length of query: 373
length of database: 4,792,584,752
effective HSP length: 140
effective length of query: 233
effective length of database: 2,834,700,992
effective search space: 660485331136
effective search space used: 660485331136
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (20.8 bits)
S2: 82 (36.0 bits)