BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780138|ref|YP_003064551.1| ABC transporter [Candidatus Liberibacter asiaticus str. psy62] (373 letters) Database: nr 13,984,884 sequences; 4,792,584,752 total letters Searching..................................................done Results from round 1 >gi|254780138|ref|YP_003064551.1| ABC transporter [Candidatus Liberibacter asiaticus str. psy62] gi|254039815|gb|ACT56611.1| ABC transporter [Candidatus Liberibacter asiaticus str. psy62] Length = 373 Score = 749 bits (1933), Expect = 0.0, Method: Compositional matrix adjust. Identities = 373/373 (100%), Positives = 373/373 (100%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY Sbjct: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK Sbjct: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA Sbjct: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE Sbjct: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR Sbjct: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII Sbjct: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 Query: 361 DSLFAIFYFAIGI 373 DSLFAIFYFAIGI Sbjct: 361 DSLFAIFYFAIGI 373 >gi|315122740|ref|YP_004063229.1| ABC transporter [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496142|gb|ADR52741.1| ABC transporter [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 211 Score = 378 bits (971), Expect = e-103, Method: Compositional matrix adjust. Identities = 184/211 (87%), Positives = 206/211 (97%) Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 +GV+GVPV+ILISFVTGAVIAQQGAFQLS FGAEIF+IDLMSILQLREIGVLLTAVM+AG Sbjct: 1 MGVTGVPVIILISFVTGAVIAQQGAFQLSNFGAEIFAIDLMSILQLREIGVLLTAVMVAG 60 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 RSGSAIVAEIGSMKINEEID+++T+G+D VR+LISPRIWALIISLPLLTILAN+SAI+GA Sbjct: 61 RSGSAIVAEIGSMKINEEIDSLKTIGIDLVRVLISPRIWALIISLPLLTILANYSAIVGA 120 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 SI++WKYYDIPF+VFF+RFHSTATL N+FTGLIKAPFMACAIGIVAMKEGF VG +S+SL Sbjct: 121 SIIVWKYYDIPFSVFFARFHSTATLGNVFTGLIKAPFMACAIGIVAMKEGFGVGTNSDSL 180 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 GK+VTTCVVQSIS+VIIIDSLFAIFYFAIGI Sbjct: 181 GKRVTTCVVQSISMVIIIDSLFAIFYFAIGI 211 >gi|222086200|ref|YP_002544732.1| ABC transporter [Agrobacterium radiobacter K84] gi|221723648|gb|ACM26804.1| ABC transporter [Agrobacterium radiobacter K84] Length = 386 Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 161/370 (43%), Positives = 242/370 (65%), Gaps = 18/370 (4%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME--KYH 66 +R GNW+S + + + +S ++DLS ++++DT GA LI E + H Sbjct: 26 YRLEGNWRSANVHGVLRRIDELTTRS-AGGRVVIDLSDLSDVDTAGALLIRRLKESQEAH 84 Query: 67 G-KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 G + ++G ++HI++L L +FT + +P++ + + + IG+ + + + Sbjct: 85 GASVSIEGSNSHIDEL--LTAFTEDPDAEKPEPRQKKSWT--ERIFAPIGETVYEVWGNL 140 Query: 126 CSQAHILGLVISNTGEFCASSYKF-KGFLLS---LIRQMYYVGVSGVPVVILISFVTGAV 181 + +ILG + + KF +G +S ++ Q+ ++GV VP+++L+S++ GA+ Sbjct: 141 VAAMYILGSAVRG------AQLKFGRGSGVSPASIVNQIDHMGVRAVPIILLMSYLIGAI 194 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IAQQGAFQL FGAE+F +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EE+ Sbjct: 195 IAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREEV 254 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA++ MGL+ + +LI PR+ AL ++LPLLTILANF+++ GA+ V W Y I FA F +R Sbjct: 255 DALKVMGLNPIGVLIFPRLVALTVALPLLTILANFASLFGAATVTWAYSGITFATFIARL 314 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 H +L+ + +G+IKAPFMA IGIVA EG VG + SLG+ VT VV+SI +VI++D Sbjct: 315 HEAISLSTVISGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTASVVKSIFVVILMD 374 Query: 362 SLFAIFYFAI 371 LFA+FY AI Sbjct: 375 GLFAMFYAAI 384 >gi|241204915|ref|YP_002976011.1| hypothetical protein Rleg_2195 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858805|gb|ACS56472.1| protein of unknown function DUF140 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 394 Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 167/369 (45%), Positives = 237/369 (64%), Gaps = 19/369 (5%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF--MEKYHG 67 R GNW+S I + D + K ++ VDLS I+EIDT G L+ E+ G Sbjct: 36 RLQGNWRSAYIHLVLRDFEKLLQK--KTGDLTVDLSDISEIDTAGIWLLCRLKKQEEAGG 93 Query: 68 K-IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 + ++ +G ++HI+++ ++S K Q + S F IGK + ++ Sbjct: 94 RTVRFEGTNSHIDEMLEMVSEEPAKVEPEQTEKVSLAARIFA----PIGKMTYEVWDNFA 149 Query: 127 SQAHILGLVISNTGEFCASSYKF-KGFLLS---LIRQMYYVGVSGVPVVILISFVTGAVI 182 + +ILG + + KF +G +S ++ Q+ ++GV VP+++L+SF+ GA+I Sbjct: 150 AAMYILGSAVRG------AQMKFGRGSGVSPASIVNQIDHMGVRAVPIILLMSFLIGAII 203 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGAFQL FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ EEID Sbjct: 204 AQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMREEID 263 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++ MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA+ V W Y I FA F SR H Sbjct: 264 ALKVMGLNPIGVLIFPRLVALTIALPLLTVLANFASLGGAAAVAWGYSGITFANFLSRLH 323 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 TL+ + +G+IKAPFMA IGIVA EG VG + SLG+ VT VV++I +VI++D Sbjct: 324 EAVTLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTAAVVKAIFVVILMDG 383 Query: 363 LFAIFYFAI 371 LFA+FY AI Sbjct: 384 LFAMFYAAI 392 >gi|116252407|ref|YP_768245.1| transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115257055|emb|CAK08149.1| putative transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 389 Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 168/369 (45%), Positives = 235/369 (63%), Gaps = 19/369 (5%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF--MEKYHG 67 R GNW+S I + D + K S VDLS I+EIDT G L+ E+ G Sbjct: 31 RLQGNWRSAYIHLVLRDFEKLLQKKTGDLS--VDLSDISEIDTAGIWLLCRLKKQEEAGG 88 Query: 68 K-IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 + ++ +G ++HI+++ + S K Q + S F IGK + ++ Sbjct: 89 RTVRFEGTNSHIDEMLEMFSEEPAKVEPEQTEKVSLAARIFA----PIGKMTYEVWDNFA 144 Query: 127 SQAHILGLVISNTGEFCASSYKF-KGFLLS---LIRQMYYVGVSGVPVVILISFVTGAVI 182 + +ILG + + KF +G +S ++ Q+ ++GV VP+++L+SF+ GA+I Sbjct: 145 AAMYILGSAVRG------AQMKFGRGSGVSPASIVNQIDHMGVRAVPIILLMSFLIGAII 198 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGAFQL FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ EEID Sbjct: 199 AQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMREEID 258 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++ MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA+ V W Y I FA F SR H Sbjct: 259 ALKVMGLNPIGVLIFPRLVALTIALPLLTVLANFASLGGAAAVAWGYSGITFANFLSRLH 318 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 TL+ + +G+IKAPFMA IGIVA EG VG + SLG+ VT VV++I +VI++D Sbjct: 319 EAVTLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTAAVVKAIFVVILMDG 378 Query: 363 LFAIFYFAI 371 LFA+FY AI Sbjct: 379 LFAMFYAAI 387 >gi|254710104|ref|ZP_05171915.1| Sulfate transporter/antisigma-factor [Brucella pinnipedialis B2/94] gi|261317653|ref|ZP_05956850.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261296876|gb|EEY00373.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] Length = 391 Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 158/373 (42%), Positives = 229/373 (61%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 23 EQDGMRVIHLSGHWISQSV-HLVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81 Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ H ++L+GV L + + + + + FF+ +F N+ +G + Sbjct: 82 RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ND HILG I + +++ QM +GV +P+V+L+S + Sbjct: 139 ISMFNDFKMAMHILGATIRGAQLKYGRGNGIP--IAAIVTQMDRMGVGAIPIVVLMSTIV 196 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F Sbjct: 257 EETDALTVIGLNAVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 377 VVDGLFAMFYAAI 389 >gi|254693733|ref|ZP_05155561.1| hypothetical protein Babob3T_03544 [Brucella abortus bv. 3 str. Tulya] gi|261214007|ref|ZP_05928288.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] gi|260915614|gb|EEX82475.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] Length = 391 Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 158/373 (42%), Positives = 229/373 (61%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 23 EQDGMRVIHLSGHWISQSV-HLVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81 Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ H ++L+GV L + + + + + FF+ +F N+ +G + Sbjct: 82 RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ND HILG I + +++ QM +GV +P+V+L+S + Sbjct: 139 ISMFNDFKMAMHILGATIRGAQLKYGRGNGIP--IAAIVTQMDRMGVGAIPIVVLMSTIV 196 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F Sbjct: 257 EETDALTVIGLNPVGVLVFPRLAALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 377 VVDGLFAMFYAAI 389 >gi|189024185|ref|YP_001934953.1| Sulfate transporter/antisigma-factor [Brucella abortus S19] gi|189019757|gb|ACD72479.1| Sulfate transporter/antisigma-factor [Brucella abortus S19] Length = 390 Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 158/373 (42%), Positives = 229/373 (61%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 22 EQDGMRVIHLSGHWISQSV-HLVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 80 Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ H ++L+GV L + + + + + FF+ +F N+ +G + Sbjct: 81 RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 137 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ND HILG I + +++ QM +GV +P+V+L+S + Sbjct: 138 ISMFNDFKMAMHILGATIRGAQLKYGRGNGIP--IAAIVTQMDRMGVGAIPIVVLMSTIV 195 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 196 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 255 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F Sbjct: 256 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 315 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 316 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 375 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 376 VVDGLFAMFYAAI 388 >gi|327190640|gb|EGE57728.1| putative ABC transporter, permease protein [Rhizobium etli CNPAF512] Length = 383 Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 162/366 (44%), Positives = 236/366 (64%), Gaps = 13/366 (3%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM--EKYHG 67 R +GNW+S + + D +++ ++ + VDLS IT+IDT G L+ E+ G Sbjct: 25 RLSGNWRSAYVHLVLRDFEKLLHQ--KAGNLTVDLSEITDIDTAGIWLLCRLKKEEEAAG 82 Query: 68 K-IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 + ++ +G + HI+++ ++ S K K + S + IGK ++ Sbjct: 83 RTVRFEGTNPHIDEMLAMFSEEPAKPEPEPKEKVSLA----ARILAPIGKMTYDVWDNLA 138 Query: 127 SQAHILGLVISNTG-EFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + +ILG + +F S S++ Q+ ++GV VP+++L+SF+ GA+IAQQ Sbjct: 139 AAMYILGSAVRGAQMKFGRGSGVSPA---SIVNQIDHMGVRAVPIILLMSFLIGAIIAQQ 195 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 GAFQL FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ EEIDA++ Sbjct: 196 GAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMREEIDALK 255 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA++V W Y I FA F +R H Sbjct: 256 VMGLNPIGVLIFPRLVALTIALPLLTVLANFASLAGAAVVAWGYSGITFANFLARLHEAV 315 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 TL+ + +G+IKAPFMA IGIVA EG VG + SLG+ VT VV++I +VI++D LFA Sbjct: 316 TLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTASVVKAIFVVILMDGLFA 375 Query: 366 IFYFAI 371 +FY AI Sbjct: 376 MFYAAI 381 >gi|190892035|ref|YP_001978577.1| probable ABC transporter, permease protein [Rhizobium etli CIAT 652] gi|190697314|gb|ACE91399.1| probable ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 389 Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 162/366 (44%), Positives = 236/366 (64%), Gaps = 13/366 (3%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM--EKYHG 67 R +GNW+S + + D +++ ++ + VDLS IT+IDT G L+ E+ G Sbjct: 31 RLSGNWRSAYVHLVLRDFEKLLHQ--KTGNLTVDLSEITDIDTAGIWLLCRLKKEEEAAG 88 Query: 68 K-IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 + ++ +G + HI+++ ++ S K K + S + IGK ++ Sbjct: 89 RTVRFEGTNPHIDEMLAMFSEEPAKPEPEPKEKVSLA----ARILAPIGKMTYDVWDNLA 144 Query: 127 SQAHILGLVISNTG-EFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + +ILG + +F S S++ Q+ ++GV VP+++L+SF+ GA+IAQQ Sbjct: 145 AAMYILGSAVRGAQMKFGRGSGVSPA---SIVNQIDHMGVRAVPIILLMSFLIGAIIAQQ 201 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 GAFQL FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ EEIDA++ Sbjct: 202 GAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMREEIDALK 261 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA++V W Y I FA F +R H Sbjct: 262 VMGLNPIGVLIFPRLVALTIALPLLTVLANFASLAGAAVVAWGYSGITFANFLARLHEAV 321 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 TL+ + +G+IKAPFMA IGIVA EG VG + SLG+ VT VV++I +VI++D LFA Sbjct: 322 TLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTASVVKAIFVVILMDGLFA 381 Query: 366 IFYFAI 371 +FY AI Sbjct: 382 MFYAAI 387 >gi|23501899|ref|NP_698026.1| toulene ABC transporter permease [Brucella suis 1330] gi|62289942|ref|YP_221735.1| toulene ABC transporter permease [Brucella abortus bv. 1 str. 9-941] gi|82699870|ref|YP_414444.1| sulfate transporter [Brucella melitensis biovar Abortus 2308] gi|237815443|ref|ZP_04594441.1| toulene ABC transporter, permease protein [Brucella abortus str. 2308 A] gi|254697384|ref|ZP_05159212.1| Sulfate transporter/antisigma-factor [Brucella abortus bv. 2 str. 86/8/59] gi|254706786|ref|ZP_05168614.1| Sulfate transporter/antisigma-factor [Brucella pinnipedialis M163/99/10] gi|254730282|ref|ZP_05188860.1| Sulfate transporter/antisigma-factor [Brucella abortus bv. 4 str. 292] gi|256031600|ref|ZP_05445214.1| Sulfate transporter/antisigma-factor [Brucella pinnipedialis M292/94/1] gi|256159738|ref|ZP_05457485.1| Sulfate transporter/antisigma-factor [Brucella ceti M490/95/1] gi|256255000|ref|ZP_05460536.1| Sulfate transporter/antisigma-factor [Brucella ceti B1/94] gi|256257499|ref|ZP_05463035.1| Sulfate transporter/antisigma-factor [Brucella abortus bv. 9 str. C68] gi|256369443|ref|YP_003106951.1| toluene ABC transporter, permease protein, putative [Brucella microti CCM 4915] gi|260545309|ref|ZP_05821050.1| sulfate transporter/antisigma-factor [Brucella abortus NCTC 8038] gi|260757978|ref|ZP_05870326.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260761801|ref|ZP_05874144.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260883775|ref|ZP_05895389.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|261222188|ref|ZP_05936469.1| conserved hypothetical protein [Brucella ceti B1/94] gi|261314254|ref|ZP_05953451.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|265988688|ref|ZP_06101245.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] gi|265998152|ref|ZP_06110709.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|297248343|ref|ZP_06932061.1| ABC transport system permease [Brucella abortus bv. 5 str. B3196] gi|23347840|gb|AAN29941.1| toulene ABC transporter, permease protein, putative [Brucella suis 1330] gi|62196074|gb|AAX74374.1| hypothetical toulene ABC transporter, permease protein [Brucella abortus bv. 1 str. 9-941] gi|82615971|emb|CAJ10994.1| Sulfate transporter/antisigma-factor antagonist STAS:Protein of unknown function DUF140 [Brucella melitensis biovar Abortus 2308] gi|237790280|gb|EEP64490.1| toulene ABC transporter, permease protein [Brucella abortus str. 2308 A] gi|255999603|gb|ACU48002.1| toluene ABC transporter, permease protein, putative [Brucella microti CCM 4915] gi|260096716|gb|EEW80591.1| sulfate transporter/antisigma-factor [Brucella abortus NCTC 8038] gi|260668296|gb|EEX55236.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260672233|gb|EEX59054.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260873303|gb|EEX80372.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|260920772|gb|EEX87425.1| conserved hypothetical protein [Brucella ceti B1/94] gi|261303280|gb|EEY06777.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|262552620|gb|EEZ08610.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|264660885|gb|EEZ31146.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] gi|297175512|gb|EFH34859.1| ABC transport system permease [Brucella abortus bv. 5 str. B3196] Length = 391 Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 158/373 (42%), Positives = 229/373 (61%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 23 EQDGMRVIHLSGHWISQSV-HLVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81 Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ H ++L+GV L + + + + + FF+ +F N+ +G + Sbjct: 82 RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ND HILG I + +++ QM +GV +P+V+L+S + Sbjct: 139 ISMFNDFKMAMHILGATIRGAQLKYGRGNGIP--IAAIVTQMDRMGVGAIPIVVLMSTIV 196 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 377 VVDGLFAMFYAAI 389 >gi|294852390|ref|ZP_06793063.1| ABC transport system permease [Brucella sp. NVSL 07-0026] gi|294820979|gb|EFG37978.1| ABC transport system permease [Brucella sp. NVSL 07-0026] Length = 391 Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 157/373 (42%), Positives = 229/373 (61%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 23 EQDGMRVIHLSGHWISQSV-HLVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81 Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ H ++L+GV L + + + + + FF+ +F N+ +G + Sbjct: 82 RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ND HILG I + +++ QM +GV +P+++L+S + Sbjct: 139 ISMFNDFKMAMHILGATIRGAQLKYGRGNGIP--IAAIVTQMDRMGVGAIPIIVLMSTIV 196 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 377 VVDGLFAMFYAAI 389 >gi|254689249|ref|ZP_05152503.1| Sulfate transporter/antisigma-factor [Brucella abortus bv. 6 str. 870] gi|260754755|ref|ZP_05867103.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260674863|gb|EEX61684.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] Length = 391 Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 158/373 (42%), Positives = 229/373 (61%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 23 EQDGMRVIHLSGHWISQSV-HLVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81 Query: 62 MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ K ++L+GV L + + + + + FF+ +F N+ +G + Sbjct: 82 RQRLAAKYVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ND HILG I + +++ QM +GV +P+V+L+S + Sbjct: 139 ISMFNDFKMAMHILGATIRGAQLKYGRGNGIP--IAAIVTQMDRMGVGAIPIVVLMSTIV 196 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 377 VVDGLFAMFYAAI 389 >gi|225627497|ref|ZP_03785534.1| toulene ABC transporter permease protein [Brucella ceti str. Cudo] gi|260168729|ref|ZP_05755540.1| Sulfate transporter/antisigma-factor [Brucella sp. F5/99] gi|261758207|ref|ZP_06001916.1| sulfate transporter/antisigma-factor [Brucella sp. F5/99] gi|225617502|gb|EEH14547.1| toulene ABC transporter permease protein [Brucella ceti str. Cudo] gi|261738191|gb|EEY26187.1| sulfate transporter/antisigma-factor [Brucella sp. F5/99] Length = 391 Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 158/373 (42%), Positives = 228/373 (61%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 23 EQDGMRVIHLSGHWISQSV-HLVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81 Query: 62 MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ K ++L+GV L + + + + + FF+ +F N+ +G + Sbjct: 82 RQRLAAKYVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ND HILG I + +++ QM GV +P+V+L+S + Sbjct: 139 ISMFNDFKMAMHILGATIRGAQLKYGRGNGIP--IAAIVTQMDRTGVGAIPIVVLMSTIV 196 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 377 VVDGLFAMFYAAI 389 >gi|17987248|ref|NP_539882.1| toluene tolerance protein Ttg2B [Brucella melitensis bv. 1 str. 16M] gi|17982923|gb|AAL52146.1| toluene tolerance protein ttg2b [Brucella melitensis bv. 1 str. 16M] Length = 390 Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 158/373 (42%), Positives = 228/373 (61%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G+ V +G W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 22 EQDGMRVIHLSGPWISQSV-HLVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 80 Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ H ++L+GV L + + + + + FF+ +F N+ +G + Sbjct: 81 RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 137 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ND HILG I + +++ QM +GV +P+V+L+S + Sbjct: 138 ISMFNDFKMAMHILGATIRGAQLKYGRGNGIP--IAAIVTQMDRMGVGAIPIVVLMSTIV 195 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 196 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 255 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F Sbjct: 256 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 315 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 316 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 375 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 376 VVDGLFAMFYAAI 388 >gi|225852524|ref|YP_002732757.1| hypothetical protein BMEA_A1060 [Brucella melitensis ATCC 23457] gi|256044678|ref|ZP_05447582.1| hypothetical protein Bmelb1R_09298 [Brucella melitensis bv. 1 str. Rev.1] gi|256113572|ref|ZP_05454392.1| hypothetical protein Bmelb3E_12477 [Brucella melitensis bv. 3 str. Ether] gi|256263986|ref|ZP_05466518.1| sulfate transporter/antisigma-factor [Brucella melitensis bv. 2 str. 63/9] gi|260564024|ref|ZP_05834510.1| sulfate transporter/antisigma-factor [Brucella melitensis bv. 1 str. 16M] gi|265991102|ref|ZP_06103659.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] gi|265994939|ref|ZP_06107496.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|225640889|gb|ACO00803.1| protein of unknown function DUF140 [Brucella melitensis ATCC 23457] gi|260154040|gb|EEW89132.1| sulfate transporter/antisigma-factor [Brucella melitensis bv. 1 str. 16M] gi|262766052|gb|EEZ11841.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|263001886|gb|EEZ14461.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] gi|263094130|gb|EEZ18052.1| sulfate transporter/antisigma-factor [Brucella melitensis bv. 2 str. 63/9] gi|326409040|gb|ADZ66105.1| conserved hypothetical protein [Brucella melitensis M28] gi|326538749|gb|ADZ86964.1| conserved hypothetical protein [Brucella melitensis M5-90] Length = 391 Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 158/373 (42%), Positives = 228/373 (61%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G+ V +G W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 23 EQDGMRVIHLSGPWISQSV-HLVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81 Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ H ++L+GV L + + + + + FF+ +F N+ +G + Sbjct: 82 RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ND HILG I + +++ QM +GV +P+V+L+S + Sbjct: 139 ISMFNDFKMAMHILGATIRGAQLKYGRGNGIP--IAAIVTQMDRMGVGAIPIVVLMSTIV 196 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 377 VVDGLFAMFYAAI 389 >gi|86357964|ref|YP_469856.1| ABC transporter permease [Rhizobium etli CFN 42] gi|86282066|gb|ABC91129.1| probable ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 389 Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 161/372 (43%), Positives = 232/372 (62%), Gaps = 25/372 (6%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSA---IVDLSAITEIDTIGAELIMYF--MEK 64 R +GNW+S + +V+ + +Q + +DLS +++IDT G L+ E+ Sbjct: 31 RLSGNWRSAYVH-----LVLHEFEKLQREKTGNLTLDLSDVSDIDTAGIWLLCRLKKQEE 85 Query: 65 YHGK-IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 G+ ++ G + HI+++ + S K QK + S L GK + Sbjct: 86 AAGRTVRFVGTNPHIDEMLEMFSEEPAKPEPEQKEKVSLAARILAPL----GKMTYDIWD 141 Query: 124 DSCSQAHILGLVISNT----GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + + +ILG + G S S++ Q+ ++GV VP+++L+SF+ G Sbjct: 142 NLAASMYILGSAVRGAQMKLGRGSGVSPA------SIVNQIDHMGVRAVPIILLMSFLIG 195 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 A+IAQQGAFQL FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ E Sbjct: 196 AIIAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMRE 255 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDA++ MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA++V W Y I FA F + Sbjct: 256 EIDALKVMGLNPIGVLIFPRLVALTIALPLLTVLANFASLAGAAVVAWGYSGITFANFLA 315 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 R H TL+ + +G+IKAPFMA IGIVA EG VG + SLG+ VT VV++I +VI+ Sbjct: 316 RLHEAITLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTASVVKAIFVVIL 375 Query: 360 IDSLFAIFYFAI 371 +D LFA+FY AI Sbjct: 376 MDGLFAMFYAAI 387 >gi|254714105|ref|ZP_05175916.1| Sulfate transporter/antisigma-factor [Brucella ceti M644/93/1] gi|254716838|ref|ZP_05178649.1| Sulfate transporter/antisigma-factor [Brucella ceti M13/05/1] gi|261218640|ref|ZP_05932921.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261321862|ref|ZP_05961059.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|260923729|gb|EEX90297.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261294552|gb|EEX98048.1| conserved hypothetical protein [Brucella ceti M644/93/1] Length = 391 Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 158/373 (42%), Positives = 228/373 (61%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++GI V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 23 EQDGIRVIHLSGHWISQSV-HLVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81 Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ H ++L+GV L + + + + + FF+ +F N+ +G + Sbjct: 82 RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ND HILG I + +++ QM +GV +P+V+L+S + Sbjct: 139 ISMFNDFKMAMHILGATIRGAQLKYGRGNGIP--IAAIVTQMDRMGVGAIPIVVLMSTIV 196 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAEIF +DL+ IL LRE+G LLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGGLLTAIMIAGRSGSAITAEIGSMKMR 256 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 377 VVDGLFAMFYAAI 389 >gi|254719095|ref|ZP_05180906.1| Sulfate transporter/antisigma-factor [Brucella sp. 83/13] gi|265984086|ref|ZP_06096821.1| conserved hypothetical protein [Brucella sp. 83/13] gi|306838379|ref|ZP_07471224.1| Sulfate transporter/antisigma-factor [Brucella sp. NF 2653] gi|264662678|gb|EEZ32939.1| conserved hypothetical protein [Brucella sp. 83/13] gi|306406519|gb|EFM62753.1| Sulfate transporter/antisigma-factor [Brucella sp. NF 2653] Length = 391 Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 157/373 (42%), Positives = 228/373 (61%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 23 EQDGMRVIHLSGHWISQSV-HLVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81 Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ H ++L+GV L + + + + + FF+ +F N+ +G + Sbjct: 82 RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ND HILG I + +++ QM +GV +P+V+L+S + Sbjct: 139 ISMFNDFKMAMHILGATIRGAQLKYGRGNGIP--IAAIVTQMDRMGVGAIPIVVLMSTIV 196 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FG EIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 197 GAIIAQQGAFQLRYFGTEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 377 VVDGLFAMFYAAI 389 >gi|163843287|ref|YP_001627691.1| hypothetical protein BSUIS_A1062 [Brucella suis ATCC 23445] gi|163674010|gb|ABY38121.1| protein of unknown function DUF140 [Brucella suis ATCC 23445] Length = 391 Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 157/373 (42%), Positives = 228/373 (61%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 23 EQDGMRVIHLSGHWISQSV-HLVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81 Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ H ++L+GV L + + + + + FF+ +F N+ +G + Sbjct: 82 RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ND HILG I + +++ QM +GV +P+V+L+S + Sbjct: 139 ISMFNDFKMAMHILGATIRGAQLKYGRGNGIP--IAAIVTQMDRMGVGAIPIVVLMSTIV 196 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY I Sbjct: 377 VVDGLFAMFYATI 389 >gi|306840506|ref|ZP_07473265.1| Sulfate transporter/antisigma-factor [Brucella sp. BO2] gi|306843893|ref|ZP_07476488.1| Sulfate transporter/antisigma-factor [Brucella sp. BO1] gi|306275648|gb|EFM57372.1| Sulfate transporter/antisigma-factor [Brucella sp. BO1] gi|306289521|gb|EFM60739.1| Sulfate transporter/antisigma-factor [Brucella sp. BO2] Length = 391 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 156/373 (41%), Positives = 228/373 (61%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G V +G+W S + ++ DD + I ++ + +D+S I+ +DT GA LI Sbjct: 23 EQDGARVIHLSGHWISQSV-QLVDDKMRGIEQAGGDKATTIDISGISNLDTAGAWLIERL 81 Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ H ++L+GV L + + + + + FF+ +F N+ +G + Sbjct: 82 RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ND HILG I + +++ QM +GV +P+V+L+S + Sbjct: 139 ISMFNDFKMAMHILGATIRGAQLKYGRGNGIP--IAAIVTQMDRMGVGAIPIVVLMSTIV 196 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376 Query: 359 IIDSLFAIFYFAI 371 ++D +FA+FY AI Sbjct: 377 VVDGMFAMFYAAI 389 >gi|256061111|ref|ZP_05451265.1| hypothetical protein Bneo5_12197 [Brucella neotomae 5K33] gi|261325112|ref|ZP_05964309.1| conserved hypothetical protein [Brucella neotomae 5K33] gi|261301092|gb|EEY04589.1| conserved hypothetical protein [Brucella neotomae 5K33] Length = 391 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 157/373 (42%), Positives = 228/373 (61%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 23 EQDGMRVIHLSGHWISQSV-HLVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81 Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ H ++L+GV L + + + + + FF+ +F N+ +G + Sbjct: 82 RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ND HILG I + +++ QM +GV +P+V+L+S + Sbjct: 139 ISMFNDFKMAMHILGATIRGAQLKYGRGNGIP--IAAIVTQMDRMGVGAIPIVVLMSTIV 196 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL++ LP LTIL++ SA++GA+ V W Y +I F Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPPLTILSDLSALVGAAGVSWLYSNISPEAFI 316 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 377 VVDGLFAMFYAAI 389 >gi|161618971|ref|YP_001592858.1| hypothetical protein BCAN_A1034 [Brucella canis ATCC 23365] gi|254704312|ref|ZP_05166140.1| hypothetical protein Bsuib36_10354 [Brucella suis bv. 3 str. 686] gi|260566441|ref|ZP_05836911.1| sulfate transporter/antisigma-factor [Brucella suis bv. 4 str. 40] gi|261754981|ref|ZP_05998690.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] gi|161335782|gb|ABX62087.1| protein of unknown function DUF140 [Brucella canis ATCC 23365] gi|260155959|gb|EEW91039.1| sulfate transporter/antisigma-factor [Brucella suis bv. 4 str. 40] gi|261744734|gb|EEY32660.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] Length = 391 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 157/373 (42%), Positives = 228/373 (61%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 23 EQDGMRVIHLSGHWISQSV-HLVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81 Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ H ++L+GV L + + + + + FF+ +F N+ +G + Sbjct: 82 RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ND HILG I + +++ QM +GV +P+V+L+S + Sbjct: 139 ISMFNDFKMAMHILGATIRGAQLKYGRGNGIP--IAAIVTQMDRMGVGAIPIVVLMSTIV 196 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 S H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 317 SHLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 377 VVDGLFAMFYAAI 389 >gi|110633893|ref|YP_674101.1| hypothetical protein Meso_1540 [Mesorhizobium sp. BNC1] gi|110284877|gb|ABG62936.1| protein of unknown function DUF140 [Chelativorans sp. BNC1] Length = 395 Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 163/373 (43%), Positives = 227/373 (60%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--M 59 ENG V R +GNW + +S + DD + + I+DL + +DT GA L+ + Sbjct: 27 EENGALVCRLSGNWTTRTVS-LVDDPMRRLRARKGLTHFIIDLGDVGHLDTAGAWLVSRL 85 Query: 60 YFMEKYHG-KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 +K +G ++++ G S L + I T ++ P+ N N+ +G+ I Sbjct: 86 AAAQKENGAQVEISGQSEAASILLAAIEPTAQEP---DVPKDGRRGNLIVNILAAMGRTI 142 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 +D HILG IS + ++ Q+ +GV +P+++L+S V Sbjct: 143 YDIKDDVLYGMHILGATISGAQMKLGRGHAVNPAAIA--NQIDRMGVGSIPIIVLMSAVV 200 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAEI+ +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 201 GAIIAQQGAFQLRWFGAEIYVVDLVGILILRELGVLLTAIMIAGRSGSAITAEIGSMKMR 260 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE+DA+ +GL+ V +L+ PR+ AL++++P LTI+ANFSA+ GA +V W Y DI A F Sbjct: 261 EEVDALTVIGLNPVGVLVFPRLVALVVAVPCLTIVANFSALGGAILVAWLYSDIMPATFI 320 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 R H L +IF GLIKAPFMA IGI+A EG VG + SLGK VT VV++I +VI Sbjct: 321 QRLHDAIDLTSIFAGLIKAPFMALIIGIIASVEGMKVGGSAESLGKHVTASVVKTIFLVI 380 Query: 359 IIDSLFAIFYFAI 371 +ID LFA+FY AI Sbjct: 381 VIDGLFAMFYAAI 393 >gi|254701770|ref|ZP_05163598.1| Sulfate transporter/antisigma-factor [Brucella suis bv. 5 str. 513] gi|261752323|ref|ZP_05996032.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] gi|261742076|gb|EEY30002.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] Length = 391 Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 157/373 (42%), Positives = 228/373 (61%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 23 EQDGMRVIHLSGHWISQSV-HLVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81 Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ H ++L+GV L + + + + + FF+ +F N+ +G + Sbjct: 82 RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ND HILG I + +++ QM +GV +P+V+L+S + Sbjct: 139 ISMFNDFKMAMHILGATIRGAQLKYGRGNGIP--IAAIVTQMDRMGVGAIPIVVLMSTIV 196 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V Y +I F Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSCLYSNISPEAFI 316 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 377 VVDGLFAMFYAAI 389 >gi|222148407|ref|YP_002549364.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] gi|221735395|gb|ACM36358.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] Length = 376 Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 152/365 (41%), Positives = 231/365 (63%), Gaps = 11/365 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--MYFMEKYH 66 R +G+W++ + + + + + +++ I D++ I+ +DT GA +I + Sbjct: 19 LRLSGSWRNTTVDTVIPKL-LELRETLNGHVEI-DITGISSLDTSGAWIIRRIELAASKQ 76 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 G +++ G S + +L S + + + + R F F+ + +GK V D Sbjct: 77 GDVQIVGGSDAMRELIS--ALPEQPPLPEKVVDRRPF---FQRVLEPVGKMSVSLFEDVL 131 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + +++LG + T + + S++ Q+ ++G+ VP+++L+SF+ GA+IAQQG Sbjct: 132 AMSYVLGSAVRGTQ--SKERRGGRASIASIVNQLDHMGLRAVPIILLMSFLIGAIIAQQG 189 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 AFQL FGAE+F +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EE+DA++ Sbjct: 190 AFQLRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREEVDALKV 249 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +GL+ + +L+ PRI AL+I+LPLLT++ANF+A+ GA++V + Y I F VF +R H Sbjct: 250 IGLNPIGVLVLPRIVALVIALPLLTVIANFAALYGAAVVSFAYSGITFQVFVTRLHDAVD 309 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 A GLIKAPFMA IGIVA EG VG + SLG+ VT VV+SI +VI++D LFA+ Sbjct: 310 YATFAAGLIKAPFMAVVIGIVAAVEGMKVGGSAESLGQHVTASVVKSIFVVILMDGLFAV 369 Query: 367 FYFAI 371 FY AI Sbjct: 370 FYAAI 374 >gi|209549578|ref|YP_002281495.1| hypothetical protein Rleg2_1984 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535334|gb|ACI55269.1| protein of unknown function DUF140 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 383 Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 162/366 (44%), Positives = 232/366 (63%), Gaps = 13/366 (3%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM--EKYHG 67 R GNW+S + + D +++ ++ VDLS IT+IDT G L+ E+ G Sbjct: 25 RLKGNWRSAYVHFVLRDFEKLLHQ--KAGDLTVDLSDITDIDTAGIWLLCRLKKEEEAAG 82 Query: 68 K-IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 + ++ +G + HI+++ + S K K + S + IG+ ++ Sbjct: 83 RTVRFEGTNPHIDEMLEMFSEEPAKPEPELKEKVSLA----ARILAPIGRMTYDIWDNFA 138 Query: 127 SQAHILGLVISNTG-EFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + +ILG + +F S S++ Q+ ++GV VP+++L+SF+ GA+IAQQ Sbjct: 139 AAMYILGSAVRGAQMKFGRGSGVSPA---SIVNQIDHMGVRAVPIILLMSFLIGAIIAQQ 195 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 GAFQL FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ EEIDA++ Sbjct: 196 GAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMREEIDALK 255 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA+ V W Y I FA F SR H Sbjct: 256 VMGLNPIGVLIFPRLVALTIALPLLTVLANFASLAGAAAVAWGYSGITFANFLSRLHEAV 315 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 TL+ + +G+IKAPFMA IGIVA EG VG + SLG+ VT VV++I +VI++D LFA Sbjct: 316 TLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTAAVVKAIFVVILMDGLFA 375 Query: 366 IFYFAI 371 +FY AI Sbjct: 376 MFYAAI 381 >gi|148560485|ref|YP_001258960.1| putative toulene ABC transporter permease [Brucella ovis ATCC 25840] gi|148371742|gb|ABQ61721.1| putative toulene ABC transporter, permease protein [Brucella ovis ATCC 25840] Length = 365 Score = 276 bits (705), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 155/369 (42%), Positives = 225/369 (60%), Gaps = 9/369 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 + V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI ++ Sbjct: 1 MRVIHLSGHWISQSV-HLVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLRQRL 59 Query: 66 ---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 H ++L+GV L + + + + + FF+ +F N+ +G ++ Sbjct: 60 AAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAVISMF 116 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ND HILG I + +++ QM +GV +P+++L+S + GA+I Sbjct: 117 NDFKMAMHILGATIRGAQLKYGRGNGIP--IAAIVTQMDRMGVGAIPIIVLMSTIVGAII 174 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEI SMK+ EE D Sbjct: 175 AQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEISSMKMREETD 234 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F SR H Sbjct: 235 ALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISRLH 294 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI++D Sbjct: 295 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 354 Query: 363 LFAIFYFAI 371 LFA+FY AI Sbjct: 355 LFAMFYAAI 363 >gi|159184854|ref|NP_354638.2| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] gi|159140135|gb|AAK87423.2| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] Length = 386 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 166/374 (44%), Positives = 232/374 (62%), Gaps = 18/374 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF-- 61 G + + +G+W++ +S I + + I KS + +DLSA+ IDT GA +I Sbjct: 23 GGGSRYVLSGSWRNSNLSGIFESLDR-IEKSKPASPVDIDLSAVEAIDTTGAWIIQRLRK 81 Query: 62 -MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 +E + L G + IE + + ++ + R + + IG+ +V+ Sbjct: 82 DLEASGATVTLTG-NDRIEDVIG--QLPDKAEMDVEPVAREGL---VERIFAPIGQAVVQ 135 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLS---LIRQMYYVGVSGVPVVILISFV 177 D + +ILG + A +G +S ++ Q+ ++GV VP+++L+SF+ Sbjct: 136 NGADFLAGMYILGSAVRG-----AQMKLGRGRGVSPAAIVNQIDHMGVRAVPIIMLMSFL 190 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 GA+IAQQGAFQL FGAE+F +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 191 IGAIIAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKM 250 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EEIDA++ +GL+ V +L+ PR+ AL I+LPLLTILANF+A+ GA+IV Y I F VF Sbjct: 251 REEIDALKVIGLNPVGVLVFPRLVALTIALPLLTILANFAALFGAAIVALAYSGITFEVF 310 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 SR H + I G+IKAPFMA IGIVA EG VG + SLGK VT+ VV+SI +V Sbjct: 311 LSRLHGAVEESTIAAGMIKAPFMALIIGIVAAVEGMKVGGSAESLGKHVTSSVVKSIFVV 370 Query: 358 IIIDSLFAIFYFAI 371 I++D LFAIFY AI Sbjct: 371 ILVDGLFAIFYAAI 384 >gi|239831972|ref|ZP_04680301.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] gi|239824239|gb|EEQ95807.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] Length = 391 Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 159/377 (42%), Positives = 227/377 (60%), Gaps = 17/377 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +G+ R G W S ++ + DD V + + + ++ I+D+S ++ +DT GA LI Sbjct: 23 EHDGVRHIRMNGRWVSQSVN-LVDDKVRRLENADKREATIIDISGVSGLDTAGAWLIERL 81 Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ +++L+GV L + + + + ++ FF SF +G + Sbjct: 82 RQRLVAQQVEVQLEGVRQSWLPLMEEVGQAVERTLDIPRQKKPFFLISF---LAALGGGV 138 Query: 119 VKFINDSCSQAHILGLVISNT----GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 V +D HILG I G S F +++ QM +GV +P++IL+ Sbjct: 139 VSLGSDFKMAMHILGATIRGAQLKYGR--GSGIPFA----AIVTQMDRMGVGAIPIIILM 192 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 S + GA+IAQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGS Sbjct: 193 STIVGAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGS 252 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 MK+ EE DA+ +GL+ V +L+ PR+ AL+I LPLLTI+++ +A+IGA V W Y +I Sbjct: 253 MKMREETDALTVIGLNPVGVLVFPRLVALVIVLPLLTIVSDLAALIGAGGVAWFYSNISP 312 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F SR H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I Sbjct: 313 DAFISRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAI 372 Query: 355 SIVIIIDSLFAIFYFAI 371 +VI++D LFA+FY AI Sbjct: 373 FVVIVVDGLFAMFYAAI 389 >gi|325293034|ref|YP_004278898.1| ABC transporter transmembrane protein [Agrobacterium sp. H13-3] gi|325060887|gb|ADY64578.1| ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 386 Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 168/369 (45%), Positives = 228/369 (61%), Gaps = 18/369 (4%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 + +G+W++ +S I + I KS + +DLS++ IDT GA +I E K Sbjct: 28 YALSGSWRNSNLSGIFARL-ENIEKSGPAGPVEIDLSSVEAIDTTGAWVIRRLREDMEAK 86 Query: 69 IKLQGVS---THIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 GV+ T E++ LI K +P + IG+ +V+ D Sbjct: 87 ----GVTVTLTGNERIEDLIGQLPDKAAMEGEPVAKVGLA--ERFFSPIGQAVVQNGADF 140 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLS---LIRQMYYVGVSGVPVVILISFVTGAVI 182 + +ILG + A +G +S ++ Q+ ++GV VP+++L+SF+ GA+I Sbjct: 141 LAGMYILGSAVRG-----AQMKLGRGRGVSPAAIVNQIDHMGVRAVPIIMLMSFLIGAII 195 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGAFQL FGAE+F +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EEID Sbjct: 196 AQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREEID 255 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++ +GL+ V +L+ PR+ AL I+LPLLTILANF+A+ GA+IV Y I F VF SR H Sbjct: 256 ALKVIGLNPVGVLVFPRLVALTIALPLLTILANFAALFGAAIVTLLYSGITFEVFLSRLH 315 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + I G+IKAPFMA IGIVA EG VG + SLGK VT+ VV+SI +VI++D Sbjct: 316 GAVEESTIAAGMIKAPFMALIIGIVAAVEGMKVGGSAESLGKHVTSSVVKSIFVVILVDG 375 Query: 363 LFAIFYFAI 371 LFAIFY AI Sbjct: 376 LFAIFYAAI 384 >gi|13470959|ref|NP_102528.1| permease of ABC transporter [Mesorhizobium loti MAFF303099] gi|14021702|dbj|BAB48314.1| permease of ABC transporter [Mesorhizobium loti MAFF303099] Length = 395 Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 157/373 (42%), Positives = 225/373 (60%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 E G+ F+G W + ++ I D+ I K + +DLS I +IDT GA LI Sbjct: 27 EEAGVLGCAFSGIWTTRTVALIDADM-RKIEKRSGFKTLALDLSKIEKIDTAGAWLIDRL 85 Query: 62 M---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + EK + +++LQG S L + R++ P R N +G+++ Sbjct: 86 VSAFEKKNVEVRLQGQSEIASILLDAVGEAVRRE-PESGPARP--PNIIIRALEAVGRRV 142 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + +D + +ILG I + ++ Q+ +GV +PVV+L+S + Sbjct: 143 YEMRDDFLASMNILGATIRGAQMKLGRGHAVNP--AAIFNQIDRMGVGAIPVVVLMSAIV 200 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA++AQQGA+QLS FGA+IF +DL+ +L LRE+GVL+TA+MIAGRSGSAI AEIGSMK+ Sbjct: 201 GAIVAQQGAYQLSYFGADIFVVDLVGVLILRELGVLMTAIMIAGRSGSAITAEIGSMKMR 260 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE+DA++ +GL+ + +L+ PR+ AL+I+LP LTI+ANF+A+ G + W Y DIP A F Sbjct: 261 EEVDALKVIGLNPIGVLVFPRLVALVIALPCLTIIANFAALGGGIVAAWLYSDIPPAAFI 320 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 R L+ IF GLIKAPFMA IG +A EG VG + SLG+ VT VV+SI +VI Sbjct: 321 DRLRVAIDLSTIFAGLIKAPFMAMIIGTIASVEGMKVGGSAESLGQHVTASVVKSIFVVI 380 Query: 359 IIDSLFAIFYFAI 371 I+D LFA+FY AI Sbjct: 381 ILDGLFAMFYAAI 393 >gi|182680563|ref|YP_001834709.1| hypothetical protein Bind_3668 [Beijerinckia indica subsp. indica ATCC 9039] gi|182636446|gb|ACB97220.1| protein of unknown function DUF140 [Beijerinckia indica subsp. indica ATCC 9039] Length = 377 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 152/370 (41%), Positives = 224/370 (60%), Gaps = 19/370 (5%) Query: 9 FRFAGNWK---SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 F AG+W S + A D++ A+ K+ A+ +L+ + +DT GA LI ++ Sbjct: 18 FSLAGHWTLEWSKGLESAAADLLKALGKA---RKAVFNLAGVERLDTAGAWLI----DRT 70 Query: 66 HGKIKLQGVSTHIEQLFS----LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + +GVST ++ + L H + K Q + F F GK +V+ Sbjct: 71 RRNLSERGVSTELDHVRPEYGILFQEAHFRTFPEPKRQNASF---FVAPLVETGKTVVEA 127 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 ++ LG I++ + F+G +SL+ Q+ +G+ VP++ LI+F+ G + Sbjct: 128 GRETLRGMSFLGEAIASLAQSFVQRQHFRG--ISLVYQIETIGLRSVPIITLINFLVGCI 185 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +AQQG FQL +FGA F++DL+ IL LRE+GVLLT++MIAGRSGSAI AEIGSMK+ EEI Sbjct: 186 VAQQGLFQLRRFGASTFAVDLLGILTLRELGVLLTSIMIAGRSGSAITAEIGSMKMREEI 245 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ MGL + +LI PR+ AL+ISLPLLT +A+ +A+ G +V + Y I F +R Sbjct: 246 DALTVMGLRPIEVLIVPRLLALVISLPLLTFIADMAALAGGLLVSYSYGGIQPVAFLNRL 305 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 H +L +TGLIKAPFMA IG++A EGFAV + SLG++VTT VV+SI +VI++D Sbjct: 306 HDAISLHTFYTGLIKAPFMALVIGLIAAVEGFAVEGSAESLGRQVTTSVVKSIFMVIVLD 365 Query: 362 SLFAIFYFAI 371 LFA+F+ I Sbjct: 366 GLFAMFFAGI 375 >gi|319783795|ref|YP_004143271.1| hypothetical protein Mesci_4108 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169683|gb|ADV13221.1| protein of unknown function DUF140 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 395 Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 153/373 (41%), Positives = 224/373 (60%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 E+G+ F+G W + ++ + D + I K + +D+S I ++DT GA LI Sbjct: 27 EEDGVLGCAFSGIWTTRTVA-LVDADMRKIEKRSGFKTLALDVSKIEKMDTAGAWLIDRL 85 Query: 62 MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + + K I++QG S L + R++ P R N +G+++ Sbjct: 86 VSAFEKKGVEIQMQGQSEIASILLEAVGEAVRRE-PESGPVRP--PNIVIRALEAVGRRV 142 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + +D + +ILG I + ++ Q+ +GV +PVV+L+S + Sbjct: 143 YEMRDDFLASMNILGATIRGAQMKLGRGHAVN--PAAIFNQIDRMGVGAIPVVVLMSAIV 200 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA++AQQGA+QLS FGA+IF +DL+ +L LRE+GVL+TA+MIAGRSGSAI AEIGSMK+ Sbjct: 201 GAIVAQQGAYQLSYFGADIFVVDLVGVLILRELGVLMTAIMIAGRSGSAITAEIGSMKMR 260 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE+DA++ +GL+ + +L+ PR+ AL+I+LP LTI+ANF+A+ G + W Y DIP A F Sbjct: 261 EEVDALKVIGLNPIGVLVFPRLVALVIALPCLTIIANFAALGGGILAAWLYSDIPPAAFI 320 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 R L+ IF GLIKAPFMA IG +A EG VG + SLG+ VT VV+SI +VI Sbjct: 321 DRLRVAIDLSTIFAGLIKAPFMAMIIGTIASVEGMKVGGSAESLGQHVTASVVKSIFVVI 380 Query: 359 IIDSLFAIFYFAI 371 I+D LFA+FY AI Sbjct: 381 ILDGLFAMFYAAI 393 >gi|260463968|ref|ZP_05812164.1| protein of unknown function DUF140 [Mesorhizobium opportunistum WSM2075] gi|259030343|gb|EEW31623.1| protein of unknown function DUF140 [Mesorhizobium opportunistum WSM2075] Length = 395 Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 157/373 (42%), Positives = 224/373 (60%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 E G+ F+G W + ++ I D+ I K + +DLS I +IDT GA LI Sbjct: 27 EEGGVLGCAFSGVWTTRTVALIDADM-RKIEKRSGFKTLALDLSKIEKIDTAGAWLIDRL 85 Query: 62 M---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + EK + +++LQG S L + R++ P R N +G+++ Sbjct: 86 VSVFEKKNVEVQLQGRSEIASILLDAVGEAVRRE-PESGPARP--PNIVLRALEAVGRRV 142 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + +D + +ILG I + ++ Q+ +GV +PVV+L+S + Sbjct: 143 YEMRDDFLASMNILGATIRGAQMKLGRGHAVNP--AAIFNQIDRMGVGAIPVVVLMSAIV 200 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA++AQQGA+QLS FGA+IF +DL+ +L LRE+GVL+TA+MIAGRSGSAI AEIGSMK+ Sbjct: 201 GAIVAQQGAYQLSYFGADIFVVDLVGVLILRELGVLMTAIMIAGRSGSAITAEIGSMKMR 260 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE+DA++ +GL+ + +L+ PR+ AL+I+LP LTI+ANF+A+ G W Y DIP A F Sbjct: 261 EEVDALKVIGLNPIGVLVFPRLVALVIALPCLTIIANFAALGGGIAAAWLYSDIPPAAFL 320 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 R L+ IF GLIKAPFMA IG +A EG VG + SLG+ VT VV+SI +VI Sbjct: 321 DRLRVAIDLSTIFAGLIKAPFMAMIIGTIASVEGMKVGGSAESLGQHVTASVVKSIFVVI 380 Query: 359 IIDSLFAIFYFAI 371 I+D LFA+FY AI Sbjct: 381 ILDGLFAMFYAAI 393 >gi|114707109|ref|ZP_01440007.1| permease of ABC transporter [Fulvimarina pelagi HTCC2506] gi|114537305|gb|EAU40431.1| permease of ABC transporter [Fulvimarina pelagi HTCC2506] Length = 394 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 143/375 (38%), Positives = 229/375 (61%), Gaps = 11/375 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 G V AG+W + I I D+ + +D A+ DLS + +IDT GA ++ Sbjct: 27 RGGTLVLEAAGDWLARTIGSIESDLERTARADLGADVAM-DLSRVGQIDTAGAFVLERLK 85 Query: 63 EKYHGK---IKLQGVSTHIEQLFSLI-SFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 K ++++G++ LF+ + S R++ Q+ + N+ +G + Sbjct: 86 RDLRAKREHVEVEGLAERNTALFAAVGSAMDRERPVRQRERSKILTNAV----IAVGSFV 141 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ++ + +++G + G + + + ++ Q+ +GV +P+++LI+F+ Sbjct: 142 IGIKDELVNGLNLIGGAMYGAGSRISGRTQSR--PAAIFNQIDQMGVKAIPIIVLITFLV 199 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G +IAQQGAFQL ++G E+++++L+SIL LREIGVLL A+MIAGRSGSAI AEIGSMK+ Sbjct: 200 GGIIAQQGAFQLRRYGGEVYAVNLISILVLREIGVLLAAIMIAGRSGSAICAEIGSMKMR 259 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE+DA+ +GL+ + +L+ PR+ AL I+LPLLT++AN +A++G +I + Y DI F F Sbjct: 260 EEVDALHVIGLNPIGVLVFPRLVALSIALPLLTVIANLAALVGGAITLRIYSDISFLNFL 319 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + L +F+GL+KAPFMA IG+VA EG VG + SLG +VT VV+SI +VI Sbjct: 320 QGLQQSIDLFTVFSGLLKAPFMAILIGLVAANEGMKVGGSAESLGLRVTAAVVKSIFLVI 379 Query: 359 IIDSLFAIFYFAIGI 373 ++D LFAIFY +IG+ Sbjct: 380 VMDGLFAIFYASIGL 394 >gi|153009437|ref|YP_001370652.1| hypothetical protein Oant_2107 [Ochrobactrum anthropi ATCC 49188] gi|151561325|gb|ABS14823.1| protein of unknown function DUF140 [Ochrobactrum anthropi ATCC 49188] Length = 391 Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 156/373 (41%), Positives = 227/373 (60%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G R +G W S ++ + DD + ++ K+ + + I+D+S ++ +DT GA LI Sbjct: 23 EQDGARHIRLSGRWVSQSVN-LVDDKMRSLEKTDEHKATIIDVSGVSGLDTAGAWLIERL 81 Query: 62 MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ K +L+GV L + + + + ++ FF+ SF +G + Sbjct: 82 RQRLVAKSADAQLEGVRQSWLPLMEEVGQAVERTLDIPRQKKPFFFISF---LAALGGGV 138 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ND HILG I + +++ QM +GV +P++IL+S + Sbjct: 139 ISMGNDFKMAMHILGATIRGAQLKYGRGSGIP--IAAIVTQMDRMGVGAIPIIILMSTIV 196 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL++ LPLLTI+++ +A+IGA V W Y +I F Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVVLPLLTIISDLAALIGAGGVAWFYSNISPDAFI 316 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 377 VVDGLFAMFYAAI 389 >gi|15965586|ref|NP_385939.1| hypothetical protein SMc00174 [Sinorhizobium meliloti 1021] gi|307302706|ref|ZP_07582462.1| protein of unknown function DUF140 [Sinorhizobium meliloti BL225C] gi|307318554|ref|ZP_07597988.1| protein of unknown function DUF140 [Sinorhizobium meliloti AK83] gi|15074767|emb|CAC46412.1| Probable ABC transporter [Sinorhizobium meliloti 1021] gi|306895894|gb|EFN26646.1| protein of unknown function DUF140 [Sinorhizobium meliloti AK83] gi|306903070|gb|EFN33661.1| protein of unknown function DUF140 [Sinorhizobium meliloti BL225C] Length = 379 Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 159/366 (43%), Positives = 223/366 (60%), Gaps = 20/366 (5%) Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK 70 F+G+W+ E +E + + K S D S IT +DT GA +I FM +++ Sbjct: 27 FSGDWRH-ETAEAMAAKLKRLEKPAGGQSEF-DFSGITRMDTAGAWIIRRFMNGTADEVR 84 Query: 71 LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS-FKNLHYHIGKKIVKFINDSCSQA 129 G + E + +L K+++ +P+ S F+ L +G+ V D+ + Sbjct: 85 FTGGERYAELVRAL-----PKQLR--RPEESATRMPLFQRLFTPVGELTVSIWTDTVAAM 137 Query: 130 HILGLVISNT----GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 ILG + G S +++ Q+ +GV P++ L+SF+ GA+IAQQ Sbjct: 138 FILGSAVRGAQMKLGRHAGVSPA------AIVHQIDRMGVMATPIITLMSFLIGAIIAQQ 191 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 GAFQL FGAEIF +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EE+DA++ Sbjct: 192 GAFQLRSFGAEIFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREEVDALK 251 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MGL V +L+ PR+ AL I LPLLTI+ANF+A+ GA++V W Y DI F +R Sbjct: 252 VMGLSPVGVLVFPRLVALTIVLPLLTIIANFAALAGAAMVAWTYSDITIPTFLARLQEAV 311 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 +++ G+IKAPFMA IG+VA EG VG + SLG++VT+ VV+SI +VI+ID LFA Sbjct: 312 DFSSVAAGMIKAPFMALIIGVVAAVEGLKVGGSAESLGRRVTSSVVKSIFVVILIDGLFA 371 Query: 366 IFYFAI 371 +FY AI Sbjct: 372 MFYAAI 377 >gi|163759630|ref|ZP_02166715.1| ABC transporter, membrane spanning protein [Hoeflea phototrophica DFL-43] gi|162283227|gb|EDQ33513.1| ABC transporter, membrane spanning protein [Hoeflea phototrophica DFL-43] Length = 428 Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 152/362 (41%), Positives = 229/362 (63%), Gaps = 10/362 (2%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK---I 69 G+W+ I+ + ++ +++ K I ++DLS ++ DT GA L+ M G+ + Sbjct: 72 GDWRHAAIAGVYGEL-LSVQKKISGADLVIDLSDLSNFDTAGAWLVRKTMVVAKGQGASV 130 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 +++G S + L S I + + +R+ F+ + +G+ + + +D + Sbjct: 131 EIEGASKPVSGLLSAIP-DPADRAEVAATERAPL---FQRIFAPVGRALYELFDDLIASM 186 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 +ILG + S +++ Q+ ++GV VP+++L+SF+ GA+IAQQGAFQ Sbjct: 187 YILGSAVRGAQLKLDRSAGISP--AAIVTQIDHMGVRAVPIIMLMSFLIGAIIAQQGAFQ 244 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L FGAE+F +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EE+DA++ +GL Sbjct: 245 LRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREEVDALKVIGL 304 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 + V +L+ PR+ AL ++LPLLT++ANF+A+ GA+ V W Y I VF SR + Sbjct: 305 NPVGVLVFPRLVALTVALPLLTVVANFAALAGAAAVAWSYSGITPDVFTSRLREAIDMTT 364 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+IKAPFMA IGIVA EG VG + SLG++VT VV+SI +VI++D LFAIFY Sbjct: 365 VASGMIKAPFMALIIGIVASVEGMKVGGSAESLGRRVTASVVKSIFVVILVDGLFAIFYA 424 Query: 370 AI 371 AI Sbjct: 425 AI 426 >gi|150396764|ref|YP_001327231.1| hypothetical protein Smed_1554 [Sinorhizobium medicae WSM419] gi|150028279|gb|ABR60396.1| protein of unknown function DUF140 [Sinorhizobium medicae WSM419] Length = 379 Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 156/365 (42%), Positives = 223/365 (61%), Gaps = 18/365 (4%) Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK 70 F+G+W+ E +E + + K S D S IT +DT GA +I FM +++ Sbjct: 27 FSGDWRH-ETAEAMSAKLKRLGKPAGGQSEF-DFSGITAMDTAGAWIIRRFMNGTADEVR 84 Query: 71 LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAH 130 G + E + +L K++++ + + + F+ L +G+ V D+ + + Sbjct: 85 FAGSDRYAELILAL-----PKQLRSPEGETAR-APLFQRLFAPVGELTVSIWTDTVAAMY 138 Query: 131 ILGLVISNT----GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 ILG + G S +++ Q+ +GV P++ L+SF+ GA+IAQQG Sbjct: 139 ILGSAVRGAQMKLGRHAGVSPA------AIVHQIDRMGVMATPIITLMSFLIGAIIAQQG 192 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 AFQL FGAEIF +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EE+DA++ Sbjct: 193 AFQLRSFGAEIFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREEVDALKV 252 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MGL + +L+ PR+ AL I LPLLTI+ANF+A+ GA++V W Y I F +R Sbjct: 253 MGLSPIGVLVFPRLVALTIVLPLLTIIANFAALAGAAMVAWAYSGITIPTFLARLQEAVD 312 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 +++ G+IKAPFMA IG+VA EG VG + SLG++VT+ VV+SI +VI+ID LFAI Sbjct: 313 FSSVAAGMIKAPFMALIIGVVAAVEGLKVGGSAESLGRRVTSSVVKSIFVVILIDGLFAI 372 Query: 367 FYFAI 371 FY AI Sbjct: 373 FYAAI 377 >gi|209885947|ref|YP_002289804.1| ABC transporter permease protein [Oligotropha carboxidovorans OM5] gi|209874143|gb|ACI93939.1| ABC transporter permease protein [Oligotropha carboxidovorans OM5] Length = 377 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 146/365 (40%), Positives = 219/365 (60%), Gaps = 11/365 (3%) Query: 12 AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA---ELIMYFMEKYHGK 68 AG+W + ++S + V A + + + +D+SA+ EIDTIGA E ++ + + Sbjct: 21 AGSWTASQVSALEPAVEAATRTASGARALQLDMSAVNEIDTIGAWLLERMIRHARQAGSE 80 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 IK G+S E+ LI + N P N Y IG+ V + + Sbjct: 81 IKTVGIS---ERFAGLI---EELRSANLNPPVYEKQNPLLLKLYQIGQSTVSSLQELLIF 134 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +LG + + + + L S I Q++ VG VP+++LI+F+ GA+IAQQG F Sbjct: 135 IDMLGRLGTVLARVILHPRRLR--LTSTIYQLHKVGWQAVPIIVLITFLIGAIIAQQGIF 192 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 +FGA+ + +D++ IL LREIGVL+ A+M+AGRSGSA AE+GSMK+ EEIDA+ TMG Sbjct: 193 HFRKFGADAYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMREEIDALTTMG 252 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD + +LI PR+ ALII+LP+LT + + +A+ G ++ W Y D+ A F +R H ++ Sbjct: 253 LDPLEVLILPRVIALIIALPILTFIGSIAALYGGGLISWLYGDMMPATFIARLHEAVSVT 312 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + GLIKAPFMA IGIVA EG V + SLG++ TT VV+SI +VI++D LFA+F+ Sbjct: 313 HFEVGLIKAPFMALVIGIVASSEGLRVKGSAESLGRQTTTSVVKSIFLVIVLDGLFAVFF 372 Query: 369 FAIGI 373 +IG+ Sbjct: 373 ASIGM 377 >gi|90417915|ref|ZP_01225827.1| possible permease protein, ABC-type transporter [Aurantimonas manganoxydans SI85-9A1] gi|90337587|gb|EAS51238.1| possible permease protein, ABC-type transporter [Aurantimonas manganoxydans SI85-9A1] Length = 377 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 147/376 (39%), Positives = 225/376 (59%), Gaps = 13/376 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +G V R +G+W + + + D V A + +VD + IDT GA L+ + Sbjct: 10 RDGGLVLRASGDWLARTVGSVEDTVAEAGAADL-GRQVVVDCGDVARIDTAGALLLEKLV 68 Query: 63 EKY--HGK-IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ-RSFFYNSFKNLHYHIGKKI 118 +G+ ++L+ VS + LF ++ RK + ++PQ N +L G+ Sbjct: 69 RGLGANGRDVRLEAVSERDQPLFDVV----RKALDRERPQPEKRKTNRILDLVAATGRGS 124 Query: 119 VKFINDSCSQAHILG-LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 V ++ +I+G ++ + + + + QM G+ VP++ L+SF+ Sbjct: 125 VAVKDEIVVALNIIGGAMVGGVQRLTGKTQIRPAAIFAQVEQM---GLRAVPIIFLMSFL 181 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 GA+IAQQGAFQL +FG E+++++L +IL LREIGVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 182 IGAIIAQQGAFQLRRFGGELYAVNLAAILILREIGVLLTAIMIAGRSGSAITAEIGSMKM 241 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EEIDA+ +GL+ + +L+ PR+ AL+I LPLL +AN + ++GA + + Y DI FA F Sbjct: 242 REEIDALHVIGLNPIGVLVFPRLVALVIVLPLLAFIANLAGLLGAMLTLNIYSDISFASF 301 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + + +F+G+IKAPFMA IG++A EG VG + SLG +VT VV+SI +V Sbjct: 302 GQGVQYSVDMFTVFSGVIKAPFMAVMIGLIASAEGMKVGGSAESLGLRVTASVVKSIFLV 361 Query: 358 IIIDSLFAIFYFAIGI 373 I++D LFAIFY +IG+ Sbjct: 362 ILMDGLFAIFYASIGL 377 >gi|218679258|ref|ZP_03527155.1| putative transmembrane component of ABC transporter [Rhizobium etli CIAT 894] Length = 281 Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 129/217 (59%), Positives = 170/217 (78%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 S++ Q+ ++GV VP+++L+SF+ GA+IAQQGAFQL FGAE+F +DL+ ILQLREIGVL Sbjct: 63 SIVNQIDHMGVRAVPIILLMSFLIGAIIAQQGAFQLRYFGAEVFVVDLVGILQLREIGVL 122 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 LT++MIAGRSGSAI AEIGSMK+ EEIDA++ MGL+ + +LI PR+ AL I+LPLLT+LA Sbjct: 123 LTSIMIAGRSGSAITAEIGSMKMREEIDALKVMGLNPIGVLIFPRLVALTIALPLLTVLA 182 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 NF+++ GA+ V W Y I FA F SR H TL+ + +G+IKAPFMA IGIVA EG Sbjct: 183 NFASLAGAAAVAWGYSGITFANFLSRLHEAVTLSTVLSGMIKAPFMALVIGIVAAVEGLK 242 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 VG + SLG+ VT VV++I +VI++D LFA+FY AI Sbjct: 243 VGGSAESLGQHVTASVVKAIFVVILMDGLFAMFYAAI 279 >gi|227822231|ref|YP_002826202.1| toulene ABC transporter, permease protein, putative [Sinorhizobium fredii NGR234] gi|227341231|gb|ACP25449.1| toulene ABC transporter, permease protein, putative [Sinorhizobium fredii NGR234] Length = 321 Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 151/332 (45%), Positives = 211/332 (63%), Gaps = 23/332 (6%) Query: 50 IDTIGAELIMYFME----KYHGKIKL-QGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFY 104 +DT GA +I FM + G+I G ++E + +L + ++P+RS Sbjct: 1 MDTAGAWIIRRFMNGIGSEAGGEIHFAHGGDRYVELVRALPG-------ELRQPERSKRK 53 Query: 105 NS-FKNLHYHIGKKIVKFINDSCSQAHILGLVISNT----GEFCASSYKFKGFLLSLIRQ 159 + F+ L IG+ V D+ + +ILG + G S +++ Q Sbjct: 54 DPLFQRLFAPIGEVTVSIWTDTVAAMYILGSAVRGAQMKLGRHAGVSPA------AIVHQ 107 Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219 + +GV P++ L+SF+ GA+IAQQGAFQL FGAEIF +DL+ ILQLREIGVLLTA+M Sbjct: 108 IDRMGVMATPIITLMSFLIGAIIAQQGAFQLRSFGAEIFVVDLVGILQLREIGVLLTAIM 167 Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279 IAGRSGSAI AEIGSMK+ EE+DA++ MGL V +L+ PR+ AL I+LPLLTI+ANF+A+ Sbjct: 168 IAGRSGSAITAEIGSMKMREEVDALKVMGLSPVGVLVFPRLVALTIALPLLTIIANFAAL 227 Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339 +GA++V W Y I A F +R +++ G+IKAPFMA IG+VA EG VG + Sbjct: 228 VGAALVAWTYSGITVATFVARLQEAVDFSSVAAGMIKAPFMALIIGVVAAVEGLKVGGSA 287 Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 SLG++VT+ VV+SI +VI+ID LFA+FY AI Sbjct: 288 ESLGRRVTSSVVKSIFVVILIDGLFAMFYAAI 319 >gi|299132338|ref|ZP_07025533.1| protein of unknown function DUF140 [Afipia sp. 1NLS2] gi|298592475|gb|EFI52675.1| protein of unknown function DUF140 [Afipia sp. 1NLS2] Length = 377 Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 141/363 (38%), Positives = 219/363 (60%), Gaps = 7/363 (1%) Query: 12 AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH-GKIK 70 AG+W + ++S + V AI+ + +D+SA+ +IDTIGA L+ + + H + Sbjct: 21 AGSWTASQVSSLEPVVNAAIHNVSGARVLQLDMSAVDQIDTIGAWLLERMIRRVHQAGSE 80 Query: 71 LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAH 130 ++ V H E+ LI + N P N+ Y IG+ V + + Sbjct: 81 IRTVGIH-ERFAGLID---ELRSVNLHPPVHERQNAVLLKLYQIGQSTVASLQELLVFLE 136 Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190 +LG + S + + L S I Q++ VG VP++++I+F+ GA+IAQQG F Sbjct: 137 MLGRLGSVLARLAFKPSRLR--LTSTIYQLHKVGWQAVPIMVMITFLIGAIIAQQGIFHF 194 Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 +FGA+ + +D++ IL LREIGVL+ A+M+AGRSGSA AE+GSMK+ EEIDA+ TMGLD Sbjct: 195 RKFGADAYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMREEIDALTTMGLD 254 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 + +L+ PR+ AL+I+LP+L + + +A+ G ++ W Y + A+F +R H ++ + Sbjct: 255 PLEVLVLPRVLALVIALPILAFIGSIAALYGGGLISWLYGGMSPAIFIARLHEAVSVTHF 314 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 GLIKAPFMA IGIVA EG V + SLG++ TT VV+SI +VI++D LFA+F+ + Sbjct: 315 EVGLIKAPFMALVIGIVASSEGLRVKGSAESLGRQTTTSVVKSIFLVIVLDGLFAVFFAS 374 Query: 371 IGI 373 IG+ Sbjct: 375 IGM 377 >gi|307945713|ref|ZP_07661049.1| ABC transporter permease protein [Roseibium sp. TrichSKD4] gi|307771586|gb|EFO30811.1| ABC transporter permease protein [Roseibium sp. TrichSKD4] Length = 382 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 139/373 (37%), Positives = 219/373 (58%), Gaps = 20/373 (5%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDS---AIVDLSAITEIDTIGAELIMYFMEK 64 V +G+W ++E A+ +V +SI D +D SAI +DT GA + + + Sbjct: 23 VLCLSGDWTISSLAE-AERLV----ESIMLDKYRVTCLDTSAIDNLDTSGA----WLVHR 73 Query: 65 YHGKIKLQGVSTHI----EQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 G ++ QG + E F+L R KP++S S GK++V Sbjct: 74 LRGSLEYQGRRVELIGLTENRFNLFCQIERHHPPEYKPEKSKV--SLVGFLEATGKQVVN 131 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 D+ + HILG + + +G +++ Q + VP+V L+SF+ GA Sbjct: 132 VGRDAIAMLHILGSLGVVLSTVLLQPKRLRGIAVAV--QFDRTCIGAVPIVALMSFLIGA 189 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 +I+QQG F L QFGA+I+ +DL IL LREIGV+LTA+M+AGRSGSA AE+G+M++ EE Sbjct: 190 IISQQGGFYLRQFGADIYVVDLAGILVLREIGVILTAIMVAGRSGSAFTAELGAMRMQEE 249 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +DA+ +GL +L+ PRI AL+I+LP+LT +A+ +A++GA + W Y DIP A + ++ Sbjct: 250 VDALHVIGLSVTEVLVLPRILALMIALPVLTFIADMAALVGAGLTTWVYLDIPPAAYLTQ 309 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + T+ ++ G++KAPFMA IG++A EG VG + SLG+ T VV++I +VI++ Sbjct: 310 LQAAITMKTLWVGIVKAPFMALIIGLIACVEGLKVGGSAESLGRHTTMSVVKAIFLVIVV 369 Query: 361 DSLFAIFYFAIGI 373 D +FAIF+ +I + Sbjct: 370 DGVFAIFFASINV 382 >gi|254502466|ref|ZP_05114617.1| conserved domain protein [Labrenzia alexandrii DFL-11] gi|222438537|gb|EEE45216.1| conserved domain protein [Labrenzia alexandrii DFL-11] Length = 382 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 141/366 (38%), Positives = 218/366 (59%), Gaps = 12/366 (3%) Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEKYHG 67 +G+W +++ AD + +N + + +D+S + +DT GA LI +E Sbjct: 26 LSGDWTVSTLAD-ADQQISKLNVA-KDKLTCIDVSEVDHLDTSGAWLIHRTRGQLEFSGR 83 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 K++L GV+ E LF I H + +P RS F + G+++V+ D+ + Sbjct: 84 KVQLTGVTPVRESLFHEIEKHHPPR---WQPDRSGF--TIVGFLEATGRQMVEVYKDTLA 138 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 HILG + + + +++ Q + VP+V L+SF+ GA+I+QQG Sbjct: 139 MLHILGSLGIVLSTVLLQPKRLRSIAIAV--QFDRSCIGAVPIVALMSFLIGAIISQQGG 196 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 F L QFGA+IF +DL IL LREIGV+LTA+M+AGRSGSA AE+G+M++ EE+DA+ + Sbjct: 197 FYLRQFGADIFVVDLAGILVLREIGVILTAIMVAGRSGSAFTAELGAMRMQEEVDALHVI 256 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GL +L+ PRI AL+I+LP+LT +A+ SA+ GA ++ W Y DIP A F ++ S T+ Sbjct: 257 GLSVTEVLVLPRILALMIALPILTFVADISALFGAGLITWAYLDIPPAAFLTQLQSAITV 316 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 G+IKAPFMA +G++A EG V S SLG+ T VV++I +VI++D +FA+F Sbjct: 317 NTFVVGIIKAPFMALIVGLIACVEGLKVEGSSESLGRHTTMAVVKAIFLVIVVDGMFAMF 376 Query: 368 YFAIGI 373 + AIG+ Sbjct: 377 FAAIGV 382 >gi|188580085|ref|YP_001923530.1| hypothetical protein Mpop_0817 [Methylobacterium populi BJ001] gi|179343583|gb|ACB78995.1| protein of unknown function DUF140 [Methylobacterium populi BJ001] Length = 382 Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 136/362 (37%), Positives = 206/362 (56%), Gaps = 12/362 (3%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA---ELIMYFMEKYHGKI 69 G W + + + + I + +VDLS + +DT+GA E +E G++ Sbjct: 28 GRWTADQGPAV-ESASARIAAQGRRQPVLVDLSGLARLDTLGAWVLERTRAEIEAAGGRL 86 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 G L + ++ +P N L G+++ + N+ S Sbjct: 87 AYAGARPEHRILLGEMG------LREPEPAPRDARNPVVRLLDGTGRRVARGGNEILSGI 140 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 LG V++ G F+ + +L+ Q+ V + GVP+++LISF+ G ++AQQG FQ Sbjct: 141 AFLGEVVAAGGRVARRPQTFR--MAALVNQLEQVALRGVPIIVLISFLVGGIVAQQGIFQ 198 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L +FGA+ F ++L+ +L LRE+GVLLT++M+AGRSGSA AEIGSM++ EE+DA+R MGL Sbjct: 199 LQRFGAQSFVVNLIGLLILRELGVLLTSIMVAGRSGSAFTAEIGSMRMREEVDALRVMGL 258 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 D + ILI PRI AL+I LP+L L + +A+ G + Y + F +R + + + Sbjct: 259 DPIEILILPRILALVIGLPILAFLGSLAALAGGGLTAAIYGGMTVDAFLARLQAAVSFHH 318 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 GLIKAPFMA IGI+A EGFAV + SLG+ VT VV+SI +VI++D LFA+F+ Sbjct: 319 FAVGLIKAPFMALTIGIIATIEGFAVEGSAESLGRHVTASVVKSIFMVIVLDGLFAVFFA 378 Query: 370 AI 371 AI Sbjct: 379 AI 380 >gi|170748370|ref|YP_001754630.1| hypothetical protein Mrad2831_1952 [Methylobacterium radiotolerans JCM 2831] gi|170654892|gb|ACB23947.1| protein of unknown function DUF140 [Methylobacterium radiotolerans JCM 2831] Length = 384 Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 134/335 (40%), Positives = 204/335 (60%), Gaps = 15/335 (4%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYHGKIKLQG-----VSTHIEQLFSLISFTHRKKIKNQ 96 VDLS I +DT+GA + +E+ +I+ G + E L+ ++ Sbjct: 58 VDLSGIERLDTLGA----WVLERTRAEIEQAGSALTYLGARPEHRI-LLGEVRLREPDAP 112 Query: 97 KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156 P+R + L G++ V+ ++ + LG +I+ G F+G +L Sbjct: 113 PPRR---HGPVVGLLDATGRRTVQGGHEFVTALAFLGELIAACGRVALRPGTFRGN--AL 167 Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I Q+ V ++G P+++LISF+ G ++AQQG FQL +FGA+ F ++L+ +L LRE+GVLLT Sbjct: 168 INQIQQVALNGTPIIVLISFLVGGIVAQQGIFQLQRFGAQTFVVNLIGLLILREMGVLLT 227 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 ++M+AGRSGSAI AEIGSM++ EE+DA+R MGLD V ILI PR+ AL+I LP+LT++ + Sbjct: 228 SIMVAGRSGSAITAEIGSMRMREEVDALRVMGLDPVEILIVPRVLALMIGLPMLTLIGDL 287 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 +A+ G + Y + F R + + ++ GLIKAPFMA IG++A EGFAV Sbjct: 288 AALAGGGLTAMLYGGLTLDQFLVRLQAAVGVHHVMVGLIKAPFMALTIGVIATIEGFAVE 347 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 + SLG+ VT VV+SI +VI++D LFA+F+ AI Sbjct: 348 GSAESLGRHVTASVVKSIFMVIVLDGLFAVFFAAI 382 >gi|218528881|ref|YP_002419697.1| hypothetical protein Mchl_0851 [Methylobacterium chloromethanicum CM4] gi|218521184|gb|ACK81769.1| protein of unknown function DUF140 [Methylobacterium chloromethanicum CM4] Length = 381 Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 136/362 (37%), Positives = 207/362 (57%), Gaps = 12/362 (3%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA---ELIMYFMEKYHGKI 69 G W + + + + I ++ +VDLS + +DT+GA E +E G++ Sbjct: 27 GRWTADQGPAV-ESASARIAAQGRTQPVLVDLSGLARLDTLGAWVLERTRAEIEAAGGRL 85 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 G L + + + PQ + N G+++ + N+ S Sbjct: 86 AYAGARPEHRILLGEMGLREPEPV----PQDT--RNPVLRFLDTTGQRVARGGNEILSGI 139 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 LG V++ G F+ + +L+ Q+ V + GVP+++LISF+ G ++AQQG FQ Sbjct: 140 AFLGEVVAAGGRVARRPQTFR--MAALVNQLEQVALRGVPIIVLISFLVGGIVAQQGIFQ 197 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L +FGA+ F ++L+ +L LRE+GVLLT++M+AGRSGSA AEIGSM++ EE+DA+R MGL Sbjct: 198 LQRFGAQSFVVNLIGLLILRELGVLLTSIMVAGRSGSAFTAEIGSMRMREEVDALRVMGL 257 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 D + ILI PRI AL+I LP+L L + +A+ G + Y + F +R + + + Sbjct: 258 DPIEILILPRILALVIGLPILAFLGSLAALAGGGLTAAIYGGMTTDAFLARLQAAVSFHH 317 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 GLIKAPFMA IGI+A EGFAV + SLG+ VT VV+SI +VI++D LFA+F+ Sbjct: 318 FAVGLIKAPFMALTIGIIATIEGFAVEGSAESLGRHVTASVVKSIFMVIVLDGLFAVFFA 377 Query: 370 AI 371 AI Sbjct: 378 AI 379 >gi|240137395|ref|YP_002961866.1| putative ABC transporter, permease [Methylobacterium extorquens AM1] gi|240007363|gb|ACS38589.1| Putative ABC transporter, permease [Methylobacterium extorquens AM1] Length = 382 Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 135/364 (37%), Positives = 207/364 (56%), Gaps = 16/364 (4%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA---ELIMYFMEKYHGKI 69 G W + + + + I ++ +VDLS + +DT+GA E +E G++ Sbjct: 28 GRWTADQGPAV-ESASARIAAQGRTQPVLVDLSGLARLDTLGAWVLERTRAEIEAAGGRL 86 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKN--QKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 G L + + + + P F + G+++ + N+ S Sbjct: 87 AYAGARPEHRILLGEMGLREPEPVPQDTRNPALRFLDTT--------GQRVARGGNEILS 138 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 LG V++ G F+ + +L+ Q+ V + GVP+++LISF+ G ++AQQG Sbjct: 139 GIAFLGEVVAAGGRVARRPQTFR--MAALVNQLEQVALRGVPIIVLISFLVGGIVAQQGI 196 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 FQL +FGA+ F ++L+ +L LRE+GVLLT++M+AGRSGSA AEIGSM++ EE+DA+R M Sbjct: 197 FQLQRFGAQSFVVNLIGLLILRELGVLLTSIMVAGRSGSAFTAEIGSMRMREEVDALRVM 256 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GLD + ILI PRI AL+I LP+L L + +A+ G + Y + F +R + + Sbjct: 257 GLDPIEILILPRILALVIGLPILAFLGSLAALAGGGLTAAIYGGMTTDAFLARLQAAVSF 316 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + GLIKAPFMA IGI+A EGFAV + SLG+ VT VV+SI +VI++D LFA+F Sbjct: 317 HHFAVGLIKAPFMALTIGIIATIEGFAVEGSAESLGRHVTASVVKSIFMVIVLDGLFAVF 376 Query: 368 YFAI 371 + AI Sbjct: 377 FAAI 380 >gi|163850324|ref|YP_001638367.1| hypothetical protein Mext_0891 [Methylobacterium extorquens PA1] gi|254559575|ref|YP_003066670.1| ABC transporter permease [Methylobacterium extorquens DM4] gi|163661929|gb|ABY29296.1| protein of unknown function DUF140 [Methylobacterium extorquens PA1] gi|254266853|emb|CAX22652.1| Putative ABC transporter, permease [Methylobacterium extorquens DM4] Length = 382 Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 135/364 (37%), Positives = 207/364 (56%), Gaps = 16/364 (4%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA---ELIMYFMEKYHGKI 69 G W + + + + I ++ +VDLS + +DT+GA E +E G++ Sbjct: 28 GRWTADQGPAV-ESASARIAAQGRTQPVLVDLSGLARLDTLGAWVLERTRAEIEAAGGRL 86 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKN--QKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 G L + + + + P F + G+++ + N+ S Sbjct: 87 AYAGARPEHRILLGEMGLREPEPVPQDTRNPALRFLDTT--------GQRVARGGNEILS 138 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 LG V++ G F+ + +L+ Q+ V + GVP+++LISF+ G ++AQQG Sbjct: 139 GIAFLGEVVAAGGRVARRPQTFR--MAALVNQLEQVALRGVPIIVLISFLVGGIVAQQGI 196 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 FQL +FGA+ F ++L+ +L LRE+GVLLT++M+AGRSGSA AEIGSM++ EE+DA+R M Sbjct: 197 FQLQRFGAQSFVVNLIGLLILRELGVLLTSIMVAGRSGSAFTAEIGSMRMREEVDALRVM 256 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GLD + ILI PRI AL+I LP+L L + +A+ G + Y + F +R + + Sbjct: 257 GLDPIEILILPRILALVIGLPILAFLGSLAALAGGGLTAAIYGGMTTDAFLARLQAAVSF 316 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + GLIKAPFMA IGI+A EGFAV + SLG+ VT VV+SI +VI++D LFA+F Sbjct: 317 HHFAVGLIKAPFMALTIGIIATIEGFAVEGSAESLGRHVTASVVKSIFMVIVLDGLFAVF 376 Query: 368 YFAI 371 + AI Sbjct: 377 FAAI 380 >gi|118588764|ref|ZP_01546172.1| hypothetical protein SIAM614_18699 [Stappia aggregata IAM 12614] gi|118438750|gb|EAV45383.1| hypothetical protein SIAM614_18699 [Stappia aggregata IAM 12614] Length = 382 Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 139/338 (41%), Positives = 205/338 (60%), Gaps = 16/338 (4%) Query: 42 VDLSAITEIDTIGAELIMYFMEK--YHG-KIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 +D+S I +DT GA LI + + G K+ L GVS + LF I H + KP Sbjct: 55 IDVSRIEHLDTSGAWLIHRTRGRLEFEGRKVGLSGVSPVRKTLFEEIENHHPP---SWKP 111 Query: 99 QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILG---LVISNTGEFCASSYKFKGFLLS 155 F S G+++V +D+ + HILG LV+S + + +S Sbjct: 112 DPGGF--SIAGFLEATGRQMVDVYHDALAMLHILGSLGLVLSTV---LLQPKRLRS--IS 164 Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 + Q + VP+V L+SF+ GA+I+QQG F L QFGA+IF +DL IL LREIGV+L Sbjct: 165 IAVQFDRSCIGAVPIVALMSFLIGAIISQQGGFYLRQFGADIFVVDLAGILVLREIGVIL 224 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA+M+AGRSGSA AE+G+M++ EE+DA+ +GL +L+ PRI AL+I+LP+LT +++ Sbjct: 225 TAIMVAGRSGSAFTAELGAMRMQEEVDALHVIGLSVTEVLVLPRILALMIALPILTFISD 284 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 +A+ G+ +V W Y DIP A F ++ + T+ + GL+KAPFMA +G++A EG V Sbjct: 285 LAALFGSGMVTWAYLDIPPAAFLTQLQAAITINTLVVGLVKAPFMALIVGLIACVEGLKV 344 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 S SLG+ T VV++I +VI++D FAIF+ AIG+ Sbjct: 345 EGSSESLGRHTTMSVVKAIFLVIVVDGFFAIFFAAIGV 382 >gi|148257023|ref|YP_001241608.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146409196|gb|ABQ37702.1| putative ABC transporter (permease protein) [Bradyrhizobium sp. BTAi1] Length = 378 Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 139/372 (37%), Positives = 220/372 (59%), Gaps = 18/372 (4%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH-- 66 R +G+W S ++E+ + A K + + +DL A++EIDT+G ++ +EK Sbjct: 18 LRPSGSWVSLNVTELENLTRSASGKVGNAKAVKLDLGAVSEIDTVG----VWLLEKLSRS 73 Query: 67 ----GK-IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 G+ +++ GV+ + L + +R+ I P+++ +L G+ + Sbjct: 74 AAAGGRLVEMTGVAENYVGLVEEVRQVNRRDIA-PPPRQNPIVAKLTDL----GRSTLGA 128 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 D +L + A + + SL+ QMY +G +P+V+LI+F+ GA+ Sbjct: 129 ARDVTVFLDMLAALSLALVRTLARPRSLR--VTSLVYQMYRIGWQAIPIVVLITFLIGAI 186 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IAQQG F +FGAE + +D++ IL LRE+GVL+ A+M+AGRSGSA AE+GSMK+ EEI Sbjct: 187 IAQQGIFHFRRFGAESYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAELGSMKMREEI 246 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ TMGLD V +LI PRI ALI++LP+L + + +A+ G +V Y + A+F +R Sbjct: 247 DALVTMGLDPVEVLILPRIVALILTLPILAFIGSMAALYGGGLVAQLYGGMGPAIFIARL 306 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 H ++ + G+ KAPFMA IGIVA EG V + SLG++ TT VV+SI +VI++D Sbjct: 307 HDAVSVTHFEVGMWKAPFMALVIGIVACSEGLRVKGSAESLGQQTTTSVVKSIFLVIVLD 366 Query: 362 SLFAIFYFAIGI 373 LFA+F+ +IG+ Sbjct: 367 GLFAVFFASIGL 378 >gi|158423837|ref|YP_001525129.1| hypothetical protein AZC_2213 [Azorhizobium caulinodans ORS 571] gi|158330726|dbj|BAF88211.1| protein of unknown function [Azorhizobium caulinodans ORS 571] Length = 408 Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 138/360 (38%), Positives = 208/360 (57%), Gaps = 9/360 (2%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFMEKYHGKIKL 71 G W S E ++ + VM + A+ +DLS + +DT GA L +E+ + Sbjct: 55 GAWTS-EYADSLEQAVMQVASHYGEAKAVEIDLSRLDRMDTFGALL----LERLRRVWQE 109 Query: 72 QGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHI 131 +GV I L S +++ + + IG+++V D+ S + Sbjct: 110 KGVEPQIVGLNPAYSVLI-EEMTRTGREPPPPERKPPGVFERIGREMVVITEDAVSLLNF 168 Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G V++ G F+ S++ QM VG +P++ILI+F+ G +IAQQG F Sbjct: 169 VGAVVAAFGRVLTRPRSFR--FTSMVNQMDRVGFRAMPIIILITFLIGCIIAQQGIFNFR 226 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 +FGA+I+ +D++ +L LRE+GVL+ ++MIAGRSGSA AE+GSM++ EE+DA+R MG D Sbjct: 227 RFGADIYVVDMVGVLVLRELGVLIVSIMIAGRSGSAYTAELGSMRMREEVDALRVMGFDP 286 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V +L+ PR+ ALII LPLLT + + +A+IG +V W Y I VF +R TLA Sbjct: 287 VEVLVVPRLLALIICLPLLTFVGSMAAMIGGGLVAWFYGGIAPDVFINRLKDAITLAQFE 346 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 G+IKAPFMA IG+V EG VG + SLG+ T VV++I +VI++D LFAIF+ +I Sbjct: 347 VGMIKAPFMAAIIGVVGCMEGLRVGGSAESLGQHTTASVVKAIFLVIVVDGLFAIFFASI 406 >gi|328543112|ref|YP_004303221.1| ABC transporter permease protein [Polymorphum gilvum SL003B-26A1] gi|326412858|gb|ADZ69921.1| ABC transporter permease protein [Polymorphum gilvum SL003B-26A1] Length = 381 Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 132/339 (38%), Positives = 201/339 (59%), Gaps = 18/339 (5%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYHGKIK-------LQGVSTHIEQLFSLISFTHRKKIK 94 +DLS I+ +DT GA + + + G+I+ L GV+ E L S + H Sbjct: 54 IDLSGISVLDTSGA----WLLHRMRGRIEFAGVRVILTGVAPKYELLLSEVDAHHPPP-- 107 Query: 95 NQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLL 154 P+R + S ++ G+ +V D + HILG + + +G + Sbjct: 108 -WSPER--YRYSIVSVLETTGRHVVDAGKDLVAMMHILGSLSVVVAGVLFRPGRLRG--I 162 Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 S+ Q + VP++ L+SF+ GA+IAQQG F L QFGA++F +DL +L LREIGVL Sbjct: 163 SIAVQFDKSCIGAVPIIALMSFLIGAIIAQQGGFYLRQFGADLFVVDLAGVLVLREIGVL 222 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 LTA+M+AGRSGSA AE+GSMK+ EEIDA+ +GL +LI PR+ AL++++P+LT ++ Sbjct: 223 LTAIMVAGRSGSAFTAELGSMKMQEEIDALHVIGLSVTEVLILPRLLALMVAMPVLTFVS 282 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 + +A+ G+ +V W Y IP A + +R + G++KAPFMA IG++A EG Sbjct: 283 DIAALFGSGLVTWSYLGIPPAAYMARLEEAISFQTFLVGMVKAPFMALIIGLIACVEGLK 342 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 VG ++SLG+ T VV++I +VI++D LFAIF+ AI + Sbjct: 343 VGGSADSLGRHTTMSVVKAIFLVIVVDGLFAIFFAAIDV 381 >gi|115523755|ref|YP_780666.1| hypothetical protein RPE_1737 [Rhodopseudomonas palustris BisA53] gi|115517702|gb|ABJ05686.1| protein of unknown function DUF140 [Rhodopseudomonas palustris BisA53] Length = 382 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 142/382 (37%), Positives = 223/382 (58%), Gaps = 24/382 (6%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMY 60 + G+ R G+W + + + + + ++ +Q + +DL+ + EIDT+GA + Sbjct: 15 DDAGVLQLRPGGSWTAGN-AVVLERLFEEVSPQLQGVRGLRIDLAGVQEIDTLGA----W 69 Query: 61 FMEKYHGKIKLQGVSTHI----EQLFSLISFTHR--KKIKNQKPQRSF---FYNSFKNLH 111 +EK + QGVS+ + E+ LI + + P+ +F + + L Sbjct: 70 LLEKMSRRAAQQGVSSELVGVDERHAGLIDEVRQVNRNAPAPHPRGNFVLGWLDQLGRLT 129 Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171 + +++ F+ + A L V+ S + L SL Q+Y VG +P++ Sbjct: 130 WASRVEVLVFLQMLGALAVALLGVLRRP-----RSLR----LTSLFYQVYRVGWQAIPIM 180 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 +LI+F+ GA+IAQQG F +FGAE + +D++ IL LREIGVL+ A+M+AGRSGSA AE Sbjct: 181 LLITFLIGAIIAQQGIFHFRKFGAESYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAE 240 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 +GSMK+ EEIDA+ TM LD V +LI PR+ ALII+LP+L+ L + +A+ G +V W Y Sbjct: 241 LGSMKMREEIDALSTMDLDPVEVLILPRVLALIIALPILSFLGSMAALYGGGLVAWFYGG 300 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 + +F +R H ++ + G+IKAPFMA IGIVA EG V + SLG++ TT VV Sbjct: 301 MSPTIFIARLHEAVSVTHFEVGIIKAPFMALVIGIVACSEGLRVKGSAESLGRQTTTSVV 360 Query: 352 QSISIVIIIDSLFAIFYFAIGI 373 +SI VI++D LFA+F+ +IG+ Sbjct: 361 KSIFCVIVLDGLFAVFFASIGM 382 >gi|217978940|ref|YP_002363087.1| protein of unknown function DUF140 [Methylocella silvestris BL2] gi|217504316|gb|ACK51725.1| protein of unknown function DUF140 [Methylocella silvestris BL2] Length = 379 Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 148/374 (39%), Positives = 220/374 (58%), Gaps = 14/374 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 SE G+ + AG+W ++I + + + AI DL+ + +DT GA + Sbjct: 14 SEEGVR-LKLAGHWTLDACADIEEGAQALVGAGAGAKHAIFDLAGVQRMDTAGA----WL 68 Query: 62 MEKYHGKIKLQGVSTHI----EQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 ++ ++ +GVS ++ L+ H + + Q P R FY L +G+ Sbjct: 69 IDGARQQLDAKGVSADFAGGRPEIDILLKEAHFRSFE-QPPGRKGFY--IVTLLADVGES 125 Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 +V D LG V+++ G+ F+G +L+ Q+ + + GVP+++LI+F+ Sbjct: 126 VVASGRDIYRGVEFLGEVVASIGKSVIQPAHFRG--TALVAQIETIALRGVPIIVLINFL 183 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 GA++AQQG FQL +FGA I +DL+ IL LRE+GVLLTA+MI+GRSGSAI AE+GSMK+ Sbjct: 184 VGAIVAQQGIFQLRRFGATILVVDLIGILILRELGVLLTAIMISGRSGSAITAELGSMKM 243 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EEIDA+ MGL + +LI+PRI ALI+SLPLLT LA+ +A+ G +V W Y I F Sbjct: 244 REEIDALVVMGLRPIDVLIAPRILALILSLPLLTFLADMAALAGGILVSWLYGGITPKSF 303 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + L +GLIKAPFM IG++A EG AV + SLG++VT VV+SI +V Sbjct: 304 IALLPEAIALRTFLSGLIKAPFMGLIIGLIACMEGLAVAGSAESLGRQVTASVVKSIFMV 363 Query: 358 IIIDSLFAIFYFAI 371 I++D LFA+F+ I Sbjct: 364 IVVDGLFAVFFATI 377 >gi|85716130|ref|ZP_01047106.1| ABC transporter permease protein [Nitrobacter sp. Nb-311A] gi|85697129|gb|EAQ35011.1| ABC transporter permease protein [Nitrobacter sp. Nb-311A] Length = 370 Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 135/366 (36%), Positives = 213/366 (58%), Gaps = 8/366 (2%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG- 67 R G W + ++ + A + ++ S +D+S ++E+DT+GA L+ + G Sbjct: 12 LRPDGFWIAANVTVLEALADAAAPQVERAKSLKMDMSGLSELDTLGAWLLEKLSRQIAGH 71 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 ++ GVS + L + +R + K + N +G+ D Sbjct: 72 PAEIVGVSENYAGLIEEVRHVNRHNLPPPKAR-----NPVIAKVEEVGRAAWNSREDVAV 126 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +LG + + L SL+ Q+Y VG +P+++LI+F+ GA+IAQQG Sbjct: 127 FLQMLGSLCVALLGIIRKPRSLR--LTSLVYQLYRVGWQAIPIILLITFLIGAIIAQQGF 184 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 F +FGA+ + +D++ IL LRE+GVL+ A+M+AGRSGSA AE+GSMK+ EEIDA+ TM Sbjct: 185 FHFRKFGADSYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAELGSMKMREEIDALSTM 244 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GLD V +LI PR+ AL+++LP+LT + + +A+ G +V W Y + ++F +R H ++ Sbjct: 245 GLDPVVVLILPRVLALVLALPILTFIGSMAALYGGGLVAWFYGGMGPSIFIARLHDAVSV 304 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + G+IKAPFMA IGIVA EG V + SLGK+ TT VV+SI +VI++D LFA+F Sbjct: 305 THFQVGMIKAPFMALVIGIVACSEGLRVKGSAESLGKQTTTSVVKSIFLVIVLDGLFAVF 364 Query: 368 YFAIGI 373 + +IG+ Sbjct: 365 FASIGM 370 >gi|146342154|ref|YP_001207202.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146194960|emb|CAL78985.1| putative ABC transporter (permease protein) [Bradyrhizobium sp. ORS278] Length = 378 Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 137/371 (36%), Positives = 215/371 (57%), Gaps = 16/371 (4%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH-- 66 R +G+W S ++++ A K + +DL +++EIDT+GA LI + Sbjct: 18 LRASGSWVSRNVTQLESLTGSACAKLGHAGIVRLDLGSVSEIDTVGAWLIEKLSRRAGVG 77 Query: 67 -GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI---GKKIVKFI 122 ++++ GV+ L + +R++I P+ + +L K + F+ Sbjct: 78 GRRVEMTGVAASYSGLVDEVRQVNRREIA-PAPRPNPIVARLTDLGRSTMGAAKDVTIFL 136 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + + + L + +S L+ QMY +G +P+V+LI+F+ GA+I Sbjct: 137 DMLAALSFALVRTLRRPRSLRVTS---------LVYQMYRIGWQAIPIVVLITFLIGAII 187 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQG F +FGAE + +D++ IL LRE+GVL+ A+M+AGRSGSA AEIGSMK+ EEID Sbjct: 188 AQQGIFHFRRFGAESYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAEIGSMKMREEID 247 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ TMGLD V +LI PRI ALI++LP+L + + +A+ G +V Y + +F +R H Sbjct: 248 ALVTMGLDPVEVLILPRIVALILTLPILAFIGSMAALYGGGLVAQLYGGMGPPIFIARLH 307 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 ++ + G++KAPFMA IGIVA EG V + SLG++ TT VV+SI +VI++D Sbjct: 308 EAISVTHFEVGMLKAPFMALVIGIVACSEGLRVKGSAESLGQQTTTSVVKSIFLVIVLDG 367 Query: 363 LFAIFYFAIGI 373 LFAIF+ +IG+ Sbjct: 368 LFAIFFASIGM 378 >gi|146341950|ref|YP_001206998.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146194756|emb|CAL78781.1| putative ABC transporter (permease protein) [Bradyrhizobium sp. ORS278] Length = 377 Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 137/375 (36%), Positives = 208/375 (55%), Gaps = 11/375 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 E R G W +P + V A + +S + +D+S ++++DT GA LI Sbjct: 11 GEGNALALRATGAWTAPFAPALERLVADAEKLAGKSGNVSIDVSQVSKLDTFGAWLIERL 70 Query: 62 MEKYHG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + + ++ G+S + SL+ R + P + + IG+ + Sbjct: 71 RRSFTTGTVEARIDGLSANYA---SLVDEVRRVSLA---PGDDATNVTITGMLGQIGRSV 124 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + + +LG VI +G F+ L S I + V VP+++LI+F+ Sbjct: 125 AGIVGTVAALIDMLGAVIVASGRVLVHPRSFR--LTSTIHHLEQVCWRAVPIIVLITFLI 182 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G +IAQQG F +FGA+IF +D++ +L LREIGVLL A+MIAGRSGSA AE+GSMK+ Sbjct: 183 GCIIAQQGIFHFRRFGADIFVVDMLGVLVLREIGVLLVAIMIAGRSGSAYTAELGSMKMR 242 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+RTMG D + +LI PR+ AL+I+LP+L+ L + +A+ G +V W Y + F Sbjct: 243 EEIDALRTMGFDPIEVLILPRMLALVIALPILSFLGDIAALYGGGLVAWFYGGVDPEAFL 302 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 R ++ + GL+KAP MA IGIVA EG AV + SLG+ T+ VV+ I VI Sbjct: 303 LRLRDAISIDHFTVGLLKAPVMAAVIGIVACVEGLAVEGSAESLGRHTTSSVVKGIFFVI 362 Query: 359 IIDSLFAIFYFAIGI 373 ++D +FAIF+ A+G+ Sbjct: 363 VMDGVFAIFFAAVGM 377 >gi|92116871|ref|YP_576600.1| hypothetical protein Nham_1315 [Nitrobacter hamburgensis X14] gi|91799765|gb|ABE62140.1| protein of unknown function DUF140 [Nitrobacter hamburgensis X14] Length = 377 Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 139/369 (37%), Positives = 205/369 (55%), Gaps = 19/369 (5%) Query: 12 AGNWKS---PEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 AG W + P + I D A + + +D+S I+ +DT GA LI E+ Sbjct: 21 AGPWTARFAPALERIVAD---AEKLAGSRPNIFIDVSQISRLDTFGAWLI----ERLRRS 73 Query: 69 IKLQGVSTHIEQLF----SLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + GV I L SL+ R + P R + L +G+ +V F Sbjct: 74 LTQGGVEAKIAGLSLNYSSLVDEVRRVPAADPAPARQ---RALTGLIEDVGRNVVGFGTT 130 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +LG V++ +G F+ L S + + V VP+V+LI+F+ G +I+Q Sbjct: 131 LTGLIGMLGAVLAASGRVMRHPRSFR--LTSTVHHLEQVCWRAVPIVVLITFLIGCIISQ 188 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG F +FGA+IF +D++ +L LREIGVLL A+M+AGRSGSA AE+GSMK+ EEIDA+ Sbjct: 189 QGIFHFRKFGADIFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMKMREEIDAL 248 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 RTMG D + +L+ PR+ AL+I+LP+L L +A+ G +V W Y + F R Sbjct: 249 RTMGFDPIEVLVLPRMLALVIALPILAFLGAIAALYGGGLVAWLYGGVQPEAFLIRLRDA 308 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++ + G+IKAP MA IGIVA EG AV + SLG++ T+ VV+ I VI++D +F Sbjct: 309 ISIDHFVVGMIKAPVMAAVIGIVACVEGLAVEGSAESLGQRTTSSVVKGIFFVIVMDGVF 368 Query: 365 AIFYFAIGI 373 AIF+ +IG+ Sbjct: 369 AIFFASIGM 377 >gi|92117460|ref|YP_577189.1| hypothetical protein Nham_1921 [Nitrobacter hamburgensis X14] gi|91800354|gb|ABE62729.1| protein of unknown function DUF140 [Nitrobacter hamburgensis X14] Length = 388 Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 138/371 (37%), Positives = 215/371 (57%), Gaps = 16/371 (4%) Query: 9 FRFAGNWKSPEI---SEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 R G+W + + +AD V + ++ S +D+S ++E+DT+GA L+ + Sbjct: 28 LRPDGSWIAANVIALETLADAVAPQVERA---KSLKMDMSGLSELDTLGAWLLEKLSRRV 84 Query: 66 HG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 +++ GVS + L + +R N P ++ N IG+ Sbjct: 85 ASADHPVEVVGVSENYAGLIEEVRHVNR---HNPPPPKA--RNPVIAKVEEIGRSAWGSR 139 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 D +LG + + L SL+ Q+Y VG +P+++LI+F+ GA+I Sbjct: 140 EDVAVFLQMLGSLCVALLGIIRKPRSLR--LTSLVYQLYRVGWQAIPIILLITFLIGAII 197 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQG F +FGA+ + +D++ IL LRE+GVL+ A+M+AGRSGSA AE+GSMK+ EEID Sbjct: 198 AQQGFFHFRKFGADSYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAELGSMKMREEID 257 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ TMGLD V +LI PR+ AL+ +LP+LT + + +A+ G +V W Y + ++F +R H Sbjct: 258 ALSTMGLDPVVVLILPRVLALVSALPILTFIGSMAALYGGGLVAWFYGGMGPSIFIARLH 317 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 ++ + G+IKAPFMA IGIVA EG V + SLGK+ TT VV+SI +VI++D Sbjct: 318 DAVSVTHFEVGMIKAPFMALVIGIVACSEGLRVKGSAESLGKQTTTSVVKSIFLVIVLDG 377 Query: 363 LFAIFYFAIGI 373 LFA+F+ +IG+ Sbjct: 378 LFAVFFASIGM 388 >gi|154243867|ref|YP_001409440.1| hypothetical protein Xaut_5005 [Xanthobacter autotrophicus Py2] gi|154162989|gb|ABS70204.1| protein of unknown function DUF140 [Xanthobacter autotrophicus Py2] Length = 344 Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 131/332 (39%), Positives = 197/332 (59%), Gaps = 11/332 (3%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHR--KKIKNQKPQ 99 V+LS IT +DT GA L +E+ G + +G + Q+ SL R ++++ + Sbjct: 20 VNLSGITRMDTFGAIL----LERLCGAWEQEG---SVPQVSSLDPRYQRLMQELERSDSR 72 Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 + + +G ++V D + +G V+S G F+ S + Q Sbjct: 73 PHPQTRRSEGILERLGHEVVNTAKDGLDLLNFIGAVVSAMGRVAVRPRSFR--FTSTVAQ 130 Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219 + VG VP+++LI+F+ G++IAQQ F +FGA+IF +D++ +L LRE+GVL+ ++M Sbjct: 131 LDRVGFRAVPIILLITFLVGSIIAQQSIFHFRRFGADIFVVDMVGVLVLRELGVLIVSIM 190 Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279 IAGRSGSA AE+GSM++ EE+DA++ MGLD + +L+ PRI ALII LPLLT L + +A+ Sbjct: 191 IAGRSGSAYTAELGSMRMREEVDALKVMGLDPIEVLVVPRILALIIGLPLLTFLGSMAAL 250 Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339 IG +V W Y I VF R L G+ KAPFMA AIG+VA EG VG + Sbjct: 251 IGGGLVAWFYGGITPNVFIDRLKQAIDLTQFEVGMYKAPFMAAAIGLVACLEGLKVGGSA 310 Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 SLG+ T VV++I +VI++D LFA+F+ +I Sbjct: 311 ESLGQHTTASVVKAIFLVIVMDGLFAVFFASI 342 >gi|296445994|ref|ZP_06887944.1| protein of unknown function DUF140 [Methylosinus trichosporium OB3b] gi|296256512|gb|EFH03589.1| protein of unknown function DUF140 [Methylosinus trichosporium OB3b] Length = 382 Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 134/366 (36%), Positives = 210/366 (57%), Gaps = 11/366 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG- 67 F AG+W +I + + A+VDL ++ +DT GA +I +++ Sbjct: 23 FALAGDWVLAAAMDIERAAEKMVADGRGATRAVVDLVHVSRLDTAGAWVIGRALDELARA 82 Query: 68 --KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 + ++G E L F R+ + +P+ S + +L G+ +V D+ Sbjct: 83 GVEASVEGARPEHELLLREAHF--RRFETDSRPRSSLCIDILADL----GRSVVTAGRDA 136 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + A LG ++ TG A + +F+ S + + G+ VP++ LI+ + GA++AQQ Sbjct: 137 FAGAVFLGEFVAVTGRAVAIARRFR--FTSFVYHLENFGLRSVPIIALINLLVGAIVAQQ 194 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 G FQL +FGA +++DL+ +L LRE+GVLL+++MIAGRSGSAI AE+GSMK+ EEIDA+R Sbjct: 195 GIFQLRRFGASTYAVDLIGVLVLRELGVLLSSIMIAGRSGSAITAELGSMKMREEIDALR 254 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MGL + L++PRI AL++++PLL +A+ SA+ G +V W Y I + + Sbjct: 255 VMGLSPMDALVTPRILALVVAMPLLAFIADMSALFGGLLVCWGYEGISPVAYLEWLQAAI 314 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 G+IKAPFMA IGIV+ EG + + SLG+ VT VV+SI +VI++D LFA Sbjct: 315 GRNTFMVGIIKAPFMAFTIGIVSAMEGMSTKGSAESLGRHVTAAVVKSIFMVIVLDGLFA 374 Query: 366 IFYFAI 371 IF+ +I Sbjct: 375 IFFASI 380 >gi|323136828|ref|ZP_08071909.1| protein of unknown function DUF140 [Methylocystis sp. ATCC 49242] gi|322398145|gb|EFY00666.1| protein of unknown function DUF140 [Methylocystis sp. ATCC 49242] Length = 380 Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 142/372 (38%), Positives = 210/372 (56%), Gaps = 13/372 (3%) Query: 4 NGITVFRFAGNW---KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI-M 59 NG +G+W S + + A +V ++ + +DLS + ++DT GA LI Sbjct: 16 NGGERLALSGDWILIASRRLEQKAQQLV---DEGGRVKFVTIDLSGVEKLDTAGAWLINR 72 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 E H + + E L R+ +KP R F N+ +L +G +V Sbjct: 73 ARHELAHADVGVALAHARPEHHTMLEEAAFRE---FEKPPRRRF-NAIVDLLADLGASVV 128 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + + LG I+ F+ SL+ M +G P+++LI+ + G Sbjct: 129 DALREFYRGVAFLGEFIAAMAYVATHPGHFR--FTSLVFHMETIGFRSAPIIVLINLLVG 186 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 A++AQQG FQL +FGA +++ L+ IL LRE+GVLLT++MIAGRSGSAI AEIGSMK+ E Sbjct: 187 AIVAQQGIFQLLKFGASSYTVSLIGILVLRELGVLLTSIMIAGRSGSAITAEIGSMKMRE 246 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDA+R MGL + +LI+PR+ ALI+SLP+LT +A+ +A+ G +V W Y I A F S Sbjct: 247 EIDALRVMGLSPIEVLIAPRVLALIVSLPILTFIADMAALFGGLLVSWSYGGISPAAFLS 306 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 L G+IKAPFMA IG++A +G + SLG++VT+ VV+SI +VI+ Sbjct: 307 LLKEAIALHTFLVGMIKAPFMALVIGLIAAMDGLETKGSAESLGRQVTSSVVKSIFMVIV 366 Query: 360 IDSLFAIFYFAI 371 +D LFAIF+ +I Sbjct: 367 LDGLFAIFFASI 378 >gi|91975833|ref|YP_568492.1| hypothetical protein RPD_1353 [Rhodopseudomonas palustris BisB5] gi|91682289|gb|ABE38591.1| protein of unknown function DUF140 [Rhodopseudomonas palustris BisB5] Length = 378 Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 135/336 (40%), Positives = 195/336 (58%), Gaps = 12/336 (3%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHI----EQLFSLISFTHRKKIKNQK 97 +D++ + EIDTIGA + +EK + G + H E+ LI +++ + Sbjct: 51 IDMTEVIEIDTIGA----WLLEKASREAAQAGRTAHFVGVGERYAGLIE--EVRQVNRHR 104 Query: 98 PQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLI 157 P N +G+ D + G + + L SL Sbjct: 105 PTPKPKVNPIIARLDQVGRSAWSATQDIAVFLDMFGALGVALLGVLRRPRSLR--LTSLT 162 Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 Q+Y VG +P+V+LI+F+ GA+IAQQG F +FGAE + +D++ IL LREIGVL+ A Sbjct: 163 YQIYRVGWRAIPIVVLITFLIGAIIAQQGIFHFRKFGAESYVVDMVGILVLREIGVLIVA 222 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +M+AGRSGSA AE+GSMK+ EEIDA+ TMGLD V +LI PRI AL+I+LP+LT + + S Sbjct: 223 IMVAGRSGSAYTAELGSMKMREEIDALSTMGLDPVEVLILPRIIALVIALPILTFIGSMS 282 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 A+ G + W Y + AV+ +R H +L + G+ KAPFMA IGIVA EG V Sbjct: 283 ALYGGLLTAWFYGGMQPAVYIARLHEAVSLNSFEVGIWKAPFMALVIGIVACSEGLRVKG 342 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + SLG + TT VV+SI +VI++D LFA+F+ +IG+ Sbjct: 343 SAESLGLQTTTSVVKSIFLVIVLDGLFAVFFASIGL 378 >gi|39937024|ref|NP_949300.1| hypothetical protein RPA3963 [Rhodopseudomonas palustris CGA009] gi|192292851|ref|YP_001993456.1| hypothetical protein Rpal_4485 [Rhodopseudomonas palustris TIE-1] gi|39650881|emb|CAE29404.1| putative permease of ABC transporter [Rhodopseudomonas palustris CGA009] gi|192286600|gb|ACF02981.1| protein of unknown function DUF140 [Rhodopseudomonas palustris TIE-1] Length = 383 Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 131/336 (38%), Positives = 192/336 (57%), Gaps = 13/336 (3%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQL----FSLISFTHRKKIKNQK 97 +D+S I +DT GA LI E+ + G I L SL+ + + Sbjct: 57 IDVSGIARLDTFGAWLI----ERLRRNLGQDGTEARIAGLSTNYASLVDEVRQVSEAGPE 112 Query: 98 PQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLI 157 P+R S + +G+ I FI+D + ++G V++ F+ L S + Sbjct: 113 PRRG---GSLRAPIERLGRTIYAFIDDIVALISMMGAVLAGVLRVVVRPTSFR--LTSTV 167 Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 + V VP+++LI+F+ G +IAQQG F +FGA++F +D++ +L LREIGVLL + Sbjct: 168 HHLEQVCWRAVPIIVLITFLIGCIIAQQGIFHFRKFGADVFVVDMLGVLVLREIGVLLVS 227 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +M+AGRSGSA AE+GSMK+ EEIDA+RTMG D + +LI PR+ AL++++P+LT L S Sbjct: 228 IMVAGRSGSAYTAELGSMKMREEIDALRTMGFDPIDVLIVPRLIALVLAVPILTFLGAMS 287 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 A+ G +V W Y + F R ++ + G+IKAP MA IGIVA EG AV Sbjct: 288 ALYGGGLVAWMYGGVDPEAFLLRLRDAISIDHFTVGMIKAPVMAVVIGIVACVEGLAVQG 347 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + SLG T VV+SI VI++D +FAIF+ IGI Sbjct: 348 SAESLGSHTTASVVKSIFFVIVMDGVFAIFFAGIGI 383 >gi|154252954|ref|YP_001413778.1| hypothetical protein Plav_2512 [Parvibaculum lavamentivorans DS-1] gi|154156904|gb|ABS64121.1| protein of unknown function DUF140 [Parvibaculum lavamentivorans DS-1] Length = 387 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 133/366 (36%), Positives = 207/366 (56%), Gaps = 13/366 (3%) Query: 12 AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKL 71 AG+W + + D + AI + AI+ IT DT A + + + + Sbjct: 31 AGDWSIVHLDPV-DRQLRAIGARPGTGRAIIGFKDITRFDTAAAAI----LGRTAAHLGE 85 Query: 72 QGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA-- 129 QG+ E + K P+ + + ++ LH I KI + D ++ Sbjct: 86 QGIKVDFEDVSDAQRLLLDKIDSCGMPEPA--HVPWRPLHIQIIDKIGATMRDIGAEGLA 143 Query: 130 --HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +G V++ G A + + + M G +P+V L++F+ GAV+AQQGA Sbjct: 144 MLGFVGAVMATAGRTIARPSRLR--WTPFVHHMEKAGFDALPLVCLLTFLIGAVVAQQGA 201 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL QFGAE+F+++L++I+ LRE+G+LLTA+++AGRSGSA AEIGSMK+ EEIDA+RT+ Sbjct: 202 VQLRQFGAEVFTVNLIAIIFLREVGLLLTAIIVAGRSGSAFTAEIGSMKMREEIDAMRTL 261 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GLD + +L+ PR+ AL+++LPLLT +A+ +IG +V+ D+P V+ SR Sbjct: 262 GLDPMEMLVLPRVLALMVTLPLLTFVADIMGLIGGGLVVQVMLDMPPGVYISRVQEAVGF 321 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 GL+KAPFMA I +V + G +V + S+G T VV+SI +VII+D+LFA+F Sbjct: 322 WTFGVGLVKAPFMAVVIALVGCRSGLSVTGSAESVGAMTTRSVVRSIFLVIILDALFAMF 381 Query: 368 YFAIGI 373 + A+GI Sbjct: 382 FTAVGI 387 >gi|86748498|ref|YP_484994.1| hypothetical protein RPB_1373 [Rhodopseudomonas palustris HaA2] gi|86571526|gb|ABD06083.1| Protein of unknown function DUF140 [Rhodopseudomonas palustris HaA2] Length = 378 Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 136/336 (40%), Positives = 195/336 (58%), Gaps = 12/336 (3%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHI----EQLFSLISFTHRKKIKNQK 97 +D++ + EIDTIGA + +EK G + ++ LI + + K Sbjct: 51 IDMTDVVEIDTIGA----WLLEKVSRDAAQAGRTAQFVGVADRYAGLIEEVRQVNRRGPK 106 Query: 98 PQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLI 157 P+ S N IG+ D +LG + + L SL Sbjct: 107 PRPSV--NPIIARLDQIGRSAWSATQDISVFLAMLGALGVALLGVLRRPRSLR--LTSLT 162 Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 Q+Y VG +P+V+LI+F+ GA+IAQQG F +FGAE + +D++ IL LREIGVL+ A Sbjct: 163 YQVYRVGWQAIPIVVLITFLIGAIIAQQGIFHFRKFGAESYVVDMVGILVLREIGVLIVA 222 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +M+AGRSGSA AE+GSMK+ EEIDA+ TMGLD V +LI PRI AL+I+LP+LT + + + Sbjct: 223 IMVAGRSGSAYTAELGSMKMREEIDALTTMGLDPVEVLILPRIIALVIALPILTFIGSMA 282 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 A+ G + W Y + AV+ +R H +L + G+ KAPFMA IGIVA EG V Sbjct: 283 ALYGGLLTAWFYGGMQPAVYIARLHEAVSLNSFEVGIWKAPFMALVIGIVACSEGLRVKG 342 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + SLG + TT VV+SI +VI++D LFA+F+ +IG+ Sbjct: 343 SAESLGLQTTTSVVKSIFLVIVLDGLFAVFFASIGM 378 >gi|316935525|ref|YP_004110507.1| hypothetical protein Rpdx1_4222 [Rhodopseudomonas palustris DX-1] gi|315603239|gb|ADU45774.1| protein of unknown function DUF140 [Rhodopseudomonas palustris DX-1] Length = 383 Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 127/336 (37%), Positives = 193/336 (57%), Gaps = 13/336 (3%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQL----FSLISFTHRKKIKNQK 97 +D+S I +DT GA LI E+ + G I L SL+ + Sbjct: 57 IDVSGIARLDTFGAWLI----ERLRRNLGQAGAEARIAGLSANYASLVDEVRQVSETGPA 112 Query: 98 PQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLI 157 P+R + + +G+ + F +D + ++G V++ G F+ L S + Sbjct: 113 PKRG---GALRAPIERLGRTMYAFFDDIVALISMMGAVLAGLGRIVIRPTSFR--LTSTV 167 Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 + V + VP+++LI+F+ G ++AQQG F +FGA++F +D++ +L LRE+GVLL A Sbjct: 168 HHLEQVCWNAVPIILLITFLIGCIVAQQGIFHFRKFGADVFVVDMLGVLVLRELGVLLVA 227 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +M+AGRSGSA AE+GSMK+ EEIDA+RTMG D + +LI PR+ AL++++P+LT L + Sbjct: 228 IMVAGRSGSAYTAELGSMKMREEIDALRTMGFDPIDVLIVPRLIALVLAVPILTFLGAMA 287 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 A+ G +V W Y + F R ++ + G+IKAP MA IGIVA EG AV Sbjct: 288 ALYGGGLVAWLYGGVDPEAFLLRLRDAISIDHFTVGMIKAPVMAAVIGIVACVEGLAVQG 347 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + SLG+ T VV+SI VI++D +FAIF+ IGI Sbjct: 348 SAESLGRHTTASVVKSIFFVIVMDGVFAIFFAGIGI 383 >gi|304391808|ref|ZP_07373750.1| ABC transporter, membrane spanning protein [Ahrensia sp. R2A130] gi|303296037|gb|EFL90395.1| ABC transporter, membrane spanning protein [Ahrensia sp. R2A130] Length = 385 Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 135/366 (36%), Positives = 223/366 (60%), Gaps = 18/366 (4%) Query: 12 AGNWKSPEISEIADDVVMAINKSIQSDSAIV-DLSAITEIDTIGAELIMYFMEKYHGKIK 70 +G W I E+ DD+ SI+ + +V + +A T++DT GA + +E+ +++ Sbjct: 30 SGPWTIAFIEEVDDDIRAF---SIEGSAKLVLNTTAATQLDTSGA----WLIERLRQRVE 82 Query: 71 LQGVS-THIE---QLFSLISFTHRK-KIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 G++ +H + + L+ HR+ + + P ++ S++ +G+ ++F D Sbjct: 83 EAGIAFSHEDDEPRRQQLVDVIHRRERPETDAPTQT---KSWRGPIVRLGEIGIEFGRDL 139 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + +ILG + S + ++S++ Q+ +G VPVV ++SF+ GA+IAQQ Sbjct: 140 MTALYILGSSVRGPSSNGGSGRGLR--VMSILNQIDQMGWRAVPVVFVMSFLIGAIIAQQ 197 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 GA+Q+ +G E+ +I L+ IL RE+GVLLT++M+AGRSGSAI AEIG+MK+ EEIDA++ Sbjct: 198 GAYQMQAYGEELLAISLVGILHFREVGVLLTSIMVAGRSGSAITAEIGTMKMREEIDALQ 257 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MGL+ V +L+ PR+ A++I LP+LT+L+N + I+GA +V+ Y I + F + Sbjct: 258 VMGLNPVGVLLFPRLLAIMICLPILTLLSNIAGIMGAMVVMDIYVGITPSQFITTLTEDI 317 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + ++ GL KAP MA IG+VA EG VG S SLG++ T VV+SI +VI++D LF Sbjct: 318 SPRHLAVGLAKAPVMALIIGLVAAVEGLKVGGSSESLGQRTTAAVVKSIFLVIVVDGLFT 377 Query: 366 IFYFAI 371 IF+ A+ Sbjct: 378 IFFSAM 383 >gi|209884491|ref|YP_002288348.1| ABC transporter permease protein [Oligotropha carboxidovorans OM5] gi|209872687|gb|ACI92483.1| ABC transporter permease protein [Oligotropha carboxidovorans OM5] Length = 378 Score = 228 bits (582), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 139/375 (37%), Positives = 213/375 (56%), Gaps = 24/375 (6%) Query: 9 FRFAGNW---KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME-K 64 R AG W +P + ++ + A KS ++ + ++D+S ++ +DT GA LI + Sbjct: 18 LRAAGEWTVHHAPALEKLVEHTERA-GKS-RNAALVIDVSQVSRLDTFGAWLIERLRRAQ 75 Query: 65 YHGKI--KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF----FYNSFKNLHYHIGKKI 118 G + + G+S SL+ R K +P+ +F + +G+ + Sbjct: 76 IRGDVAPPIAGLSA---DYASLVEEVKRVKAPPVQPRPAFGPIRAVEAVGRSVVEVGQTL 132 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + +N S H L VI + S ++F S I + V VP+V+LI+F+ Sbjct: 133 LSLLNMMGSVLHALWRVILHP-----SHFRFT----STIHHLEQVCWRAVPIVLLITFLI 183 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G +IAQQG FQ +FGA++F +D++ +L LREIGVLL A+M+AGRSGSA AE+GSM++ Sbjct: 184 GCIIAQQGIFQFRKFGADVFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMRMR 243 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE+DA+RTMG D +LI PRI ALII++P+L L +A+ G + W Y + F Sbjct: 244 EEVDALRTMGFDPTEVLILPRILALIIAMPILAFLGAMAALYGGGLTAWLYGGVQPDAFL 303 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 +R ++ + GL+KAPFMA IGI+A EG AV + SLG+ T VV+SI VI Sbjct: 304 ARLREAISINHFTVGLVKAPFMALIIGIIACVEGAAVRGSAESLGQHTTASVVKSIFFVI 363 Query: 359 IIDSLFAIFYFAIGI 373 ++D +FAIF+ +IG+ Sbjct: 364 VVDGIFAIFFASIGV 378 >gi|39937298|ref|NP_949574.1| hypothetical protein RPA4238 [Rhodopseudomonas palustris CGA009] gi|39651156|emb|CAE29679.1| putative permease of ABC transporter [Rhodopseudomonas palustris CGA009] Length = 378 Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 143/372 (38%), Positives = 210/372 (56%), Gaps = 26/372 (6%) Query: 13 GNWKSPE---ISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH--- 66 G W + + +++ DV I + S +D++ I EIDTIGA + +EK Sbjct: 22 GAWTATNSKFMEQLSQDVAPQIAAA---KSLTIDMAEIGEIDTIGA----WVLEKLSRSA 74 Query: 67 ---GKI-KLQGVSTHIEQLFSLI-SFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 G+ + +G+ST +L + R + KP N IG+ Sbjct: 75 AQAGRTAQFKGISTSYAELIDEVRQLNRRGPTPHPKP------NPIIAKLDEIGRSAWSA 128 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 D +LG + + + L SL Q+Y VG +P+++LI+F+ GA+ Sbjct: 129 TTDMAVFLEMLGALGAALLGVLRRPRSLR--LTSLTYQVYRVGWQAIPIMVLITFLIGAI 186 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IAQQG F +FGAE + +D++ IL LREIGVL+ A+M+AGRSGSA AE+GSMK+ EEI Sbjct: 187 IAQQGIFHFRKFGAESYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMREEI 246 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ TMGLD V +LI PRI AL+I+LP+L + + +A+ G + W Y + +VF +R Sbjct: 247 DALSTMGLDPVEVLILPRIIALVIALPILAFVGSMAALYGGLLTAWFYGGMQPSVFIARL 306 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 H +L + G+ KAPFMA IGIVA EG V + SLG + TT VV+SI +VI++D Sbjct: 307 HEAVSLNSFEVGMWKAPFMALVIGIVACSEGLRVKGSAESLGLQTTTSVVKSIFLVIVLD 366 Query: 362 SLFAIFYFAIGI 373 LFA+F+ +IG+ Sbjct: 367 GLFAVFFASIGM 378 >gi|192293078|ref|YP_001993683.1| hypothetical protein Rpal_4717 [Rhodopseudomonas palustris TIE-1] gi|192286827|gb|ACF03208.1| protein of unknown function DUF140 [Rhodopseudomonas palustris TIE-1] Length = 382 Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 143/372 (38%), Positives = 210/372 (56%), Gaps = 26/372 (6%) Query: 13 GNWKSPE---ISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH--- 66 G W + + +++ DV I + S +D++ I EIDTIGA + +EK Sbjct: 26 GAWTATNSKFMEQLSQDVAPQIAAA---KSLTIDMAEIGEIDTIGA----WVLEKLSRSA 78 Query: 67 ---GKI-KLQGVSTHIEQLFSLI-SFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 G+ + +G+ST +L + R + KP N IG+ Sbjct: 79 AQAGRTAQFKGISTSYAELIDEVRQLNRRGPTPHPKP------NPIIAKLDEIGRSAWSA 132 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 D +LG + + + L SL Q+Y VG +P+++LI+F+ GA+ Sbjct: 133 TTDMAVFLEMLGALGAALLGVLRRPRSLR--LTSLTYQVYRVGWQAIPIMVLITFLIGAI 190 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IAQQG F +FGAE + +D++ IL LREIGVL+ A+M+AGRSGSA AE+GSMK+ EEI Sbjct: 191 IAQQGIFHFRKFGAESYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMREEI 250 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ TMGLD V +LI PRI AL+I+LP+L + + +A+ G + W Y + +VF +R Sbjct: 251 DALSTMGLDPVEVLILPRIIALVIALPILAFVGSMAALYGGLLTAWFYGGMQPSVFIARL 310 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 H +L + G+ KAPFMA IGIVA EG V + SLG + TT VV+SI +VI++D Sbjct: 311 HEAVSLNSFEVGMWKAPFMALVIGIVACSEGLRVKGSAESLGLQTTTSVVKSIFLVIVLD 370 Query: 362 SLFAIFYFAIGI 373 LFA+F+ +IG+ Sbjct: 371 GLFAVFFASIGM 382 >gi|182680400|ref|YP_001834546.1| hypothetical protein Bind_3500 [Beijerinckia indica subsp. indica ATCC 9039] gi|182636283|gb|ACB97057.1| protein of unknown function DUF140 [Beijerinckia indica subsp. indica ATCC 9039] Length = 376 Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 125/362 (34%), Positives = 211/362 (58%), Gaps = 8/362 (2%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72 G+W + + + ++ + + + + VD+ + EIDT GA L+ ++ + + K Sbjct: 22 GSWIGAHAAAL-EPLIEGVRRDGRGRTLSVDMRGVDEIDTFGACLLERLIQSWKAEGKET 80 Query: 73 GVSTHIEQLFSLIS-FTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHI 131 ++ ++ L++ H + +Q + +S + G+ + D+ + + Sbjct: 81 TITGLSDRFGDLVAEVDHVSRSMSQAAAKRTSLDSLRAF----GRAAMDLWLDTRNFLVV 136 Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG +++ K + SL+ Q+ VG+ VP+++LI+F+ G +IAQQG F Sbjct: 137 LGRLVAVFLVVLRHPKKMR--FTSLVAQLDRVGLQAVPIILLITFLIGGIIAQQGLFNFR 194 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 +FGA+ + +DL++ L LRE+GVL+ A+M+AGRSGS+ AEIGSMK+ EEIDA+RTMGLD Sbjct: 195 KFGADTYVVDLLAFLVLRELGVLIVAIMVAGRSGSSYTAEIGSMKMREEIDALRTMGLDP 254 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V +L+ PR+ AL+++LP+LT L +A+ G +V W Y + +F R A+L Sbjct: 255 VEVLLLPRVLALVLALPMLTFLGFMAALYGGGVVSWIYGGMSPPIFIERIRDAASLTQFE 314 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 GLIKAPFMA IG++A EG AV + SLG + T+ VV+SI ++I++D + +F+ A Sbjct: 315 VGLIKAPFMALVIGVIACTEGLAVQGSAESLGLRTTSSVVKSIFLIIVLDGILDLFFAAT 374 Query: 372 GI 373 G+ Sbjct: 375 GM 376 >gi|148256837|ref|YP_001241422.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146409010|gb|ABQ37516.1| putative ABC transporter (permease protein) [Bradyrhizobium sp. BTAi1] Length = 377 Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 134/368 (36%), Positives = 202/368 (54%), Gaps = 11/368 (2%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH-- 66 R G W +P + V A + + +D+S ++ +DT GA LI + Sbjct: 18 LRATGAWTAPFAPSLERLVADAEKLAGKKIDVSIDVSEVSRLDTFGAWLIERLRRSFTTG 77 Query: 67 -GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 + ++ G+S + SL+ R + P + + IG+ + Sbjct: 78 TAEARIDGLSANYA---SLVDEVRRV---SAAPDGDATAVTITGMLGQIGRSVAGIFGTV 131 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + +LG VI +G F+ L S I + V VP+++LI+F+ G +IAQQ Sbjct: 132 AALIDMLGAVIVASGRVFIHPRSFR--LTSTIHHLEQVCWRAVPIIVLITFLIGCIIAQQ 189 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 G F +FGA+IF +D++ +L LREIGVLL A+MIAGRSGSA AE+GSMK+ EEIDA+R Sbjct: 190 GIFHFRRFGADIFVVDMLGVLVLREIGVLLVAIMIAGRSGSAYTAELGSMKMREEIDALR 249 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 TMG D + +LI PR+ AL+I+LP+L+ L + +A+ G +V W Y + F R Sbjct: 250 TMGFDPIEVLILPRMLALVIALPILSFLGDIAALYGGGLVAWFYGGVDPEAFLLRLREAI 309 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 ++ + GL+KAP MA IGIVA EG AV + SLG+ T+ VV+ I VI++D +FA Sbjct: 310 SIDHFTVGLLKAPVMAAVIGIVACVEGLAVQGSAESLGRHTTSSVVKGIFFVIVMDGVFA 369 Query: 366 IFYFAIGI 373 IF+ +G+ Sbjct: 370 IFFATVGM 377 >gi|27381176|ref|NP_772705.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27354343|dbj|BAC51330.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 378 Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 135/373 (36%), Positives = 216/373 (57%), Gaps = 20/373 (5%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSD-----SAIVDLSAITEIDTIGAELIMYFME 63 R G+W + ++ ++ +++S+ +D + +D+S ++ +DT+GA + +E Sbjct: 18 LRPQGSWTAANVA-----MLETLSRSVGADVDRSRAVTLDMSGVSALDTLGA----WVLE 68 Query: 64 KYHGKIKLQGVSTH---IEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 K + G S + FS + R+ ++ + L +GK V Sbjct: 69 KLSRRAATSGRSAEFVGVADHFSGLMDEVREVNRHTPAPAAAPNPLLLRLG-DLGKSTVG 127 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 D +LG + + L SL+ Q+Y +G +P+V LI+F+ GA Sbjct: 128 AREDITIFLQMLGALFMAIFGVLRRPRSLR--LTSLVYQLYRIGWQAIPIVALITFLIGA 185 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 +IAQQG F +FGAE +++D++ IL LRE+GVL+ A+M+AGRSGSA AE+GSMK+ EE Sbjct: 186 IIAQQGFFHFRRFGAESYTVDMVGILVLRELGVLIVAIMVAGRSGSAYTAELGSMKMREE 245 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ TMGLD V +LI PR+ AL+I+LP+L + + +A+ G +V Y D+ A++ +R Sbjct: 246 IDALSTMGLDPVGVLILPRVAALVIALPILAFIGSIAALYGGGLVAQFYGDMGPAIYIAR 305 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 H ++ + G++KAPFMA IGIVA EG V + SLG++ TT VV+SI +VI++ Sbjct: 306 LHEAISVTHFEVGILKAPFMALVIGIVACSEGLRVKGSAESLGRQTTTSVVKSIFLVIVL 365 Query: 361 DSLFAIFYFAIGI 373 D LFAIF+ +IG+ Sbjct: 366 DGLFAIFFASIGM 378 >gi|316935758|ref|YP_004110740.1| hypothetical protein Rpdx1_4456 [Rhodopseudomonas palustris DX-1] gi|315603472|gb|ADU46007.1| protein of unknown function DUF140 [Rhodopseudomonas palustris DX-1] Length = 382 Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 141/370 (38%), Positives = 207/370 (55%), Gaps = 22/370 (5%) Query: 13 GNWKSPEISEIADDVVMAINKSIQS-DSAIVDLSAITEIDTIGAELIMYFMEKYH----- 66 G W + S+I + + + I S S +D++AI EIDTIGA + +EK Sbjct: 26 GAWTATN-SKIMEQLSAGAAQQIASAKSLTIDMAAIGEIDTIGA----WVLEKLSRSAAE 80 Query: 67 --GKIKLQGVSTHIEQLFSLI-SFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + +G++ +L + R + KP N IG+ Sbjct: 81 AGSPAQFKGIADSYAELIDEVRQLNRRGPTPHPKP------NPIIAKLDEIGRSAWSATA 134 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 D +LG + + L SL Q+Y VG +P+++LI+F+ GA+IA Sbjct: 135 DIAVFLQMLGALGVAVLGVLRRPRSLR--LTSLTYQVYRVGWQAIPIMVLITFLIGAIIA 192 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 QQG F +FGA+ + +D++ IL LREIGVL+ A+M+AGRSGSA AE+GSMK+ EEIDA Sbjct: 193 QQGIFHFRKFGADSYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMREEIDA 252 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + TMGLD V +LI PRI AL+I+LP+L + + +A+ G + W Y + +VF +R H Sbjct: 253 LSTMGLDPVEVLILPRIIALVIALPILAFIGSMAALYGGLLTAWFYGGMQPSVFIARLHE 312 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +L + G+ KAPFMA IGIVA EG V + SLG + TT VV+SI +VI++D L Sbjct: 313 AVSLNSFQVGMWKAPFMALVIGIVACSEGLRVKGSAESLGLQTTTSVVKSIFLVIVLDGL 372 Query: 364 FAIFYFAIGI 373 FA+F+ +IG+ Sbjct: 373 FAVFFASIGM 382 >gi|254470335|ref|ZP_05083739.1| ABC transporter permease protein [Pseudovibrio sp. JE062] gi|211960646|gb|EEA95842.1| ABC transporter permease protein [Pseudovibrio sp. JE062] Length = 382 Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 138/373 (36%), Positives = 214/373 (57%), Gaps = 8/373 (2%) Query: 2 SENG-ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +E+G + + +G W + ++++ + S+ VDL A++ +DT GA L+ Sbjct: 15 AEDGALLLLTASGAWGIRQ-GATCENLINQVAASLTHSVICVDLKAVSFLDTAGAWLLQR 73 Query: 61 F-MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 F ME+ +++ + E+ L+ R+++ N P NSF N +G+ Sbjct: 74 FQMEQAEQGREVKFLYED-ERFDILLKEVDRQEVDN--PTEEHSGNSFLNYLEAVGEATR 130 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + D+ +LG + + + + + + Q +G VP+V L+SF+ G Sbjct: 131 QLGRDTRDILAMLGSLTATITAAATHPSRLRPISIGVQFQRSCMG--AVPIVCLMSFLIG 188 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 +IAQQG F L QFGAEIF +DL IL LREIGV+LTA+M+AGRSGSA AE+GSMK+ E Sbjct: 189 GIIAQQGGFYLKQFGAEIFVVDLSGILVLREIGVILTAIMVAGRSGSAYTAELGSMKMQE 248 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDA++ GL +LI PR+ AL+I+LP+L LAN +A+ GA + W Y I F + Sbjct: 249 EIDALQVTGLRVTEVLILPRLVALMIALPILVFLANIAALFGAGLTCWWYLGIVPHSFIA 308 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 + + T+ + G++KAPFMA IG++A EG V S SLG+ T VV+SI +VI+ Sbjct: 309 QLQAAVTVDTLMVGIVKAPFMALIIGLIACMEGMKVEGSSESLGRHTTVSVVKSIFMVIV 368 Query: 360 IDSLFAIFYFAIG 372 +D +FA+F+ +IG Sbjct: 369 VDGVFAVFFASIG 381 >gi|299131823|ref|ZP_07025018.1| protein of unknown function DUF140 [Afipia sp. 1NLS2] gi|298591960|gb|EFI52160.1| protein of unknown function DUF140 [Afipia sp. 1NLS2] Length = 383 Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 133/371 (35%), Positives = 206/371 (55%), Gaps = 16/371 (4%) Query: 9 FRFAGNWK---SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---M 62 R G W +P + ++ + + + S S ++D+S I+ +DT GA LI + Sbjct: 23 LRAGGEWTVHHAPALEKLVERTERSRDGS--RASLVIDVSQISRLDTFGAWLIERLRRAL 80 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + + G+S L + K++K + + + +G+ +V Sbjct: 81 TRGDTAPMIAGLSADYASLVEEV-----KRVKAVPEPAKVPFGPVRAVEA-VGRTVVGVA 134 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + ++ G ++S F+ L S + Q+ V VP+V+LI+F+ G +I Sbjct: 135 DTLLGLLNMTGSILSAFWRVILHPSHFR--LTSTVHQLEQVCWRAVPIVVLITFLIGCII 192 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQG FQ +FGA++F +D++ +L LREIGVLL A+M+AGRSGSA AE+GSM++ EE+D Sbjct: 193 AQQGIFQFRKFGADVFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMRMREEVD 252 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+RTMG D +LI PRI AL+I++P+L L +A+ G + W Y + F SR Sbjct: 253 ALRTMGFDPTEVLILPRILALVIAMPILAFLGAMAALYGGGLTAWLYGGVQPDAFLSRLR 312 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 ++ + GL+KAPFMA IGI+A EG AV + SLGK T VV+SI VI++D Sbjct: 313 EAISINHFTVGLVKAPFMALIIGIIACVEGAAVQGSAESLGKHTTASVVKSIFFVIVVDG 372 Query: 363 LFAIFYFAIGI 373 LFAIF+ +IG+ Sbjct: 373 LFAIFFASIGV 383 >gi|90422963|ref|YP_531333.1| hypothetical protein RPC_1452 [Rhodopseudomonas palustris BisB18] gi|90104977|gb|ABD87014.1| protein of unknown function DUF140 [Rhodopseudomonas palustris BisB18] Length = 377 Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 129/365 (35%), Positives = 207/365 (56%), Gaps = 11/365 (3%) Query: 12 AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEKYHGK 68 AG+W +P + V A S + +D+SA+ ++DT GA LI + + + Sbjct: 21 AGSWTAPFAPVLERIVAEAEALSGTRPNISIDVSAVAKLDTFGAWLIERLRRSLTQGDAE 80 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + G+S + L + +++K+ +P + S + +G+ + F++ Sbjct: 81 ATIAGLSANYSSLVDEV-----RRVKDPEPSKRGGI-SLRAPVERLGRSVAGFLDTIVGL 134 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 + G V++ F+ L S + + V VP+V+LI+F+ G ++AQQG F Sbjct: 135 VAMTGAVMAGMLRVVMHPGSFR--LTSTVHHLEQVCWRAVPIVMLITFLIGCIVAQQGIF 192 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 +FGA++F +D++ +L LRE+GVLL A+M+AGRSGSA AE+GSMK+ EEIDA+RTMG Sbjct: 193 HFRKFGADVFVVDMLGVLVLRELGVLLVAIMVAGRSGSAYTAELGSMKMREEIDALRTMG 252 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 D + +LI PR+ AL++++P+LT L +A+ G +V W Y + F R ++ Sbjct: 253 FDPIDVLIMPRMMALVLAMPILTFLGVVAALYGGGLVAWLYGGVDPDAFLLRLRDAISID 312 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + G+IKAP MA IGIVA EG AV + SLG+ T VV+ I VI++D +FAIF+ Sbjct: 313 HFTVGMIKAPVMAIVIGIVACVEGLAVAGSAESLGRHTTASVVKGIFFVIVMDGVFAIFF 372 Query: 369 FAIGI 373 +IG+ Sbjct: 373 ASIGM 377 >gi|90425518|ref|YP_533888.1| hypothetical protein RPC_4043 [Rhodopseudomonas palustris BisB18] gi|90107532|gb|ABD89569.1| protein of unknown function DUF140 [Rhodopseudomonas palustris BisB18] Length = 378 Score = 225 bits (573), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 133/370 (35%), Positives = 208/370 (56%), Gaps = 12/370 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + R G+W + + + + + Q+ + +DL+ + EIDT+GA + +EK Sbjct: 17 LLRPTGSWTAVHAAALEHLFDVVAPQLRQAKALTIDLAELHEIDTLGA----WLLEKISR 72 Query: 68 KIKLQGVSTHI----EQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + G + E+ LI +++ ++P + + IG+ Sbjct: 73 RAAQAGHPASVVGAAERYAGLID--QVRQVNRRQPANAVRGSLILTRLEDIGRATWGARE 130 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 D + + G + + + L SL+ Q+Y VG +P++ LI+F+ GA+IA Sbjct: 131 DLFAFLQMTGALANALLGVLRRPRSLR--LTSLVYQIYRVGWQAIPIIGLITFLIGAIIA 188 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 QQG F +FGAE + +D++ IL LRE+GVL+ A+M+AGRSGSA AE+GSMK+ EEIDA Sbjct: 189 QQGIFHFRKFGAESYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAELGSMKMREEIDA 248 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + TM LD V +LI PR+ ALII+LP+L L +A+ G +V W Y + +F +R H Sbjct: 249 LSTMDLDPVEVLILPRVIALIIALPILAFLGAMAALYGGGLVAWFYGGMSPTIFIARLHE 308 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 ++ + G+IKAPFMA IGIVA EG V + SLG++ T VV+SI VI++D L Sbjct: 309 AVSITHFEVGIIKAPFMALVIGIVACSEGLRVMGSAESLGRQTTASVVKSIFCVIVLDGL 368 Query: 364 FAIFYFAIGI 373 FA+F+ +IG+ Sbjct: 369 FAVFFASIGM 378 >gi|254512708|ref|ZP_05124774.1| ABC transporter, inner membrane subunit [Rhodobacteraceae bacterium KLH11] gi|221532707|gb|EEE35702.1| ABC transporter, inner membrane subunit [Rhodobacteraceae bacterium KLH11] Length = 374 Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 133/368 (36%), Positives = 207/368 (56%), Gaps = 15/368 (4%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIV-DLSAITEIDTIGAELIMYFMEKY--- 65 R G+ ++ E+ DDV K S +V D+S + +DT GA LI + + Sbjct: 18 RITGDLRTQEL----DDVEADFGKLRPSGQNVVLDMSQLQSLDTGGAWLIADLVRRLGSD 73 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 +++ +G L +S + + +Q P R IG++ D+ Sbjct: 74 SSQVQFEGAKPAHASLIETVSKNIPQAVGDQAPARGVVV-----WVSRIGERTFGAWEDT 128 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 S LGL + ++ + +L+ QM VG +P+V L+ F+ G V+A Q Sbjct: 129 LSIMGFLGLTLHRLVRTLIMPWRLR--RAALVSQMEQVGFKALPIVALMGFLIGVVLAFQ 186 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 GA QL QFGAEIF ++L+SI LRE+G+LLTA+++AGRSGSA A IGSMK+ EEIDA+R Sbjct: 187 GATQLKQFGAEIFVVELISISILRELGILLTAIIVAGRSGSAFTASIGSMKVQEEIDAMR 246 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 T+GLD + +L+ PR+ AL+I LP+L +A+ + +IG +++ W + +F +R Sbjct: 247 TLGLDPIEVLVIPRVLALLIMLPILGFIADMAGLIGGALMSWIDLGVSPGMFLTRLKENT 306 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 +A + G+IKAPF A IG++A + V S S+G++ T VVQSI +VI ID+LF+ Sbjct: 307 GVAQLAVGMIKAPFFALVIGVIACWQAMQVKGSSESVGQRTTASVVQSIFMVIAIDALFS 366 Query: 366 IFYFAIGI 373 IF+ +G+ Sbjct: 367 IFFSELGV 374 >gi|115523490|ref|YP_780401.1| hypothetical protein RPE_1471 [Rhodopseudomonas palustris BisA53] gi|115517437|gb|ABJ05421.1| protein of unknown function DUF140 [Rhodopseudomonas palustris BisA53] Length = 377 Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 134/367 (36%), Positives = 207/367 (56%), Gaps = 15/367 (4%) Query: 12 AGNWKSPEISEIADDVVMAINKSIQSDSA--IVDLSAITEIDTIGAELIMYFMEKY-HGK 68 AG W +P + VV A +++ SD A ++D+S ++ +DT GA LI G Sbjct: 21 AGPWTAPYAPALERIVVEA--EALSSDGAKVLIDVSDVSRLDTFGAWLIERLRRSLAQGG 78 Query: 69 IKLQ--GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 I+ Q G+S + L + ++++ RS L IG+ +V F + Sbjct: 79 IEAQIAGLSANYSSLVDEV-----RRVEADDAPRSTKMRLRAPLE-EIGRNVVGFGDTMV 132 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 S + G V ++ F+ L S + + V VP+V+LI+F+ G ++AQQG Sbjct: 133 SLVAMSGAVTASVFRLIRHPLSFR--LTSTVHHLEQVCWRAVPIVVLITFLIGCIVAQQG 190 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 F +FGA++F +D++ +L LRE+GVLL A+M+AGRSGSA AE+GSMK+ EEIDA+RT Sbjct: 191 IFHFRKFGADVFVVDMLGVLVLRELGVLLVAIMVAGRSGSAYTAELGSMKMREEIDALRT 250 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG D + +L+ PR+ AL++++P+LT L +A+ G +V W Y + F R + Sbjct: 251 MGFDPIDVLVMPRLIALVLAVPILTFLGVVAALYGGGLVAWVYGGVEPDAFLLRLREAIS 310 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + + G+IKAP MA IG+VA EG AV + SLG+ T VV+ I VI++D +FAI Sbjct: 311 IDHFTVGMIKAPVMALVIGVVACVEGLAVQGSAESLGQHTTASVVKGIFFVIVMDGVFAI 370 Query: 367 FYFAIGI 373 + IG+ Sbjct: 371 MFATIGM 377 >gi|91976115|ref|YP_568774.1| hypothetical protein RPD_1636 [Rhodopseudomonas palustris BisB5] gi|91682571|gb|ABE38873.1| protein of unknown function DUF140 [Rhodopseudomonas palustris BisB5] Length = 383 Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 135/367 (36%), Positives = 204/367 (55%), Gaps = 15/367 (4%) Query: 12 AGNWKS---PEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 AG+W + P + I D A + + +D+S + +DT GA LI E+ Sbjct: 27 AGSWTARFAPSLERIVAD---AEKLTGTRPNIFIDVSEVARLDTFGAWLI----ERLRRN 79 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN--SFKNLHYHIGKKIVKFINDSC 126 + GV I L S + +++ +P + + + +G+ + F +D Sbjct: 80 LTQDGVEARIAGL-SANYASLVDEVRQVQPDVPAVASGGALRAPIEKLGRTMYVFADDIV 138 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + +LG V++ F+ L S + + V VP+V+LI+F+ G +IAQQG Sbjct: 139 ALISMLGAVLAGVMRAILHPTTFR--LTSTVHHLEQVCWRAVPIVVLITFLIGCIIAQQG 196 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 F +FGA++F +D++ +L LREIGVLL A+M+AGRSGSA AE+GSMK+ EEIDA+RT Sbjct: 197 IFHFRRFGADVFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMKMREEIDALRT 256 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG D + +LI PR+ AL++++P+LT L SA+ G +V W Y + F R + Sbjct: 257 MGFDPIDVLIVPRLIALLLAMPILTFLGAMSALYGGGLVAWLYGGVDPEAFLLRLRDAIS 316 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + + G+IKAP MA IGIVA EG AV + SLG T VV+ I VI++D +FAI Sbjct: 317 INHFTVGMIKAPVMALVIGIVACVEGLAVKGSAESLGSHTTASVVKGIFFVIVMDGVFAI 376 Query: 367 FYFAIGI 373 F+ +IGI Sbjct: 377 FFASIGI 383 >gi|86748751|ref|YP_485247.1| hypothetical protein RPB_1627 [Rhodopseudomonas palustris HaA2] gi|86571779|gb|ABD06336.1| Protein of unknown function DUF140 [Rhodopseudomonas palustris HaA2] Length = 383 Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 133/366 (36%), Positives = 201/366 (54%), Gaps = 13/366 (3%) Query: 12 AGNWKS---PEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 AG+W + P + I D A + + +D+S + +DT GA LI E+ Sbjct: 27 AGSWTAKFAPVLERIVAD---AEQLTGTRPNIFIDVSEVVRLDTFGAWLI----ERLRRN 79 Query: 69 IKLQGVSTHIEQLFS-LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + G+ I L + S + P + + +G+ + F +D + Sbjct: 80 LAQDGIEAKIAGLSANYASLVDEVRQVEPVPADTSRGGGLRAPIEKLGRTMFAFGDDIVA 139 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +LG V++ F+ L S + + V VP+V+LI+F+ G +IAQQG Sbjct: 140 LISMLGAVLAGVLRAILHPSTFR--LASTVHHLEQVCWRAVPIVVLITFLIGCIIAQQGI 197 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 F +FGA++F +D++ +L LREIGVLL A+M+AGRSGSA AE+GSMK+ EEIDA+RTM Sbjct: 198 FHFRRFGADVFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMKMREEIDALRTM 257 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G D + +LI PR+ AL++++P+LT L +A+ G +V W Y + F R ++ Sbjct: 258 GFDPIDVLIVPRLLALLLAMPILTFLGAMAALYGGGLVAWLYGGVDPEAFLLRLRDAISI 317 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + G+IKAP MA IGIVA EG AV + SLG+ T VV+ I VI++D +FAIF Sbjct: 318 NHFTVGMIKAPVMALVIGIVACVEGLAVRGSAESLGQHTTASVVKGIFFVIVMDGVFAIF 377 Query: 368 YFAIGI 373 + +IGI Sbjct: 378 FASIGI 383 >gi|298292077|ref|YP_003694016.1| hypothetical protein Snov_2101 [Starkeya novella DSM 506] gi|296928588|gb|ADH89397.1| protein of unknown function DUF140 [Starkeya novella DSM 506] Length = 382 Score = 222 bits (566), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 129/369 (34%), Positives = 201/369 (54%), Gaps = 12/369 (3%) Query: 8 VFRFAGNWKSPEISEIAD--DVVMAINKSIQSDSAIVDLSAITEIDTIGA---ELIMYFM 62 VF G W + + + D +A K ++A +DLS + DT+GA + ++ + Sbjct: 19 VFVGNGRWVAGQGRALEGGVDTALAELKVGAVETARLDLSGVRGFDTVGAVMVDRLLRAL 78 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 E + ++ G+ L I K + P R N+ +G+ +V Sbjct: 79 EVAGVRFQIVGLERRFRPLLDEIV-----KGSHDVPPRRHHVNAVIGGIQLVGQTVVNTG 133 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 DS +G V++ F+G S++ + G+ VP++ LI+F+ G +I Sbjct: 134 RDSLVFLSFIGAVVAALLRVIVRPQTFRG--TSMVYHLERTGLRAVPIIALITFLIGCII 191 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQG F +FGA + +D++ IL LRE+GVL+ ++M+AGRSGSA AE+GSM++ EE+D Sbjct: 192 AQQGIFHFRKFGATTYVVDMVGILTLRELGVLIVSIMVAGRSGSAFTAELGSMRMREEVD 251 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R MG D +L+ PR+ ALII++PLLT + N A+ G +V W Y I +F +R Sbjct: 252 ALRVMGFDPNEVLVLPRLVALIIAVPLLTFIGNMCALFGGGLVAWLYGGISPEIFLNRLQ 311 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L G+IKAPFMA +G++A EG VG + SLG T VV++I +VI++D Sbjct: 312 EAIALNTFEVGMIKAPFMAAIVGLIACMEGMRVGGSAESLGAHTTAAVVKAIFLVIVVDG 371 Query: 363 LFAIFYFAI 371 LFA+F+ AI Sbjct: 372 LFAMFFAAI 380 >gi|154248034|ref|YP_001418992.1| hypothetical protein Xaut_4113 [Xanthobacter autotrophicus Py2] gi|154162119|gb|ABS69335.1| protein of unknown function DUF140 [Xanthobacter autotrophicus Py2] Length = 474 Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 138/367 (37%), Positives = 207/367 (56%), Gaps = 23/367 (6%) Query: 13 GNWKSPEISEIADDVVMAINKSIQS----DSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 G W SE AD++ A++ + +S +DLSA+ +DT GA L + G Sbjct: 121 GAW----TSEYADELEQAVDDTARSYANPKGIEIDLSAVERMDTFGALLFERLKRSWKGT 176 Query: 69 IKLQGVSTHIEQLFS----LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 GV ++ L LI R + P R + + G + V D Sbjct: 177 ----GVEPQVKGLAPRYKVLIEEMGRMGQEQPPPARRH-----EAILERFGHETVNVAAD 227 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + + +G ++ G F+ +++ QM VG+ VP+++LI+F+ G ++AQ Sbjct: 228 AAALLNFVGASVAAMGRVLLRPRSFR--FTAMVNQMDRVGLRAVPIIVLITFLIGCILAQ 285 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG F +FGA+I+ +D++ +L LRE+GVL+ A+MIAGRSGSA AE+GSM++ EEIDA+ Sbjct: 286 QGIFNFRRFGADIYVVDMVGVLVLRELGVLIVAIMIAGRSGSAYTAELGSMRMREEIDAL 345 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R MG D V +L+ PR+ ALII+LPLLT + + S+++GA +V W Y I VF R Sbjct: 346 RVMGFDPVEVLVVPRLLALIIALPLLTFIGSMSSLLGAGLVSWGYGGITPDVFLDRLKGA 405 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + G+IKAPFMA IGIVA EG VG + SLG T VV++I +VI++D +F Sbjct: 406 IDMDQFNVGMIKAPFMAATIGIVACLEGLRVGGSAESLGAHTTASVVKAIFLVIVMDGVF 465 Query: 365 AIFYFAI 371 A+F+ AI Sbjct: 466 AMFFAAI 472 >gi|27381005|ref|NP_772534.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27354171|dbj|BAC51159.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 367 Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 132/365 (36%), Positives = 201/365 (55%), Gaps = 13/365 (3%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFMEKY-HGKIK 70 G W + + + + +V K S +I +D+S + ++DT GA LI G ++ Sbjct: 12 GTWTA-SFAPVLERMVADAEKLAGSPQSIFIDVSEVAKLDTFGAWLIERLRRSLTQGTVE 70 Query: 71 LQ--GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 Q G+S + SL+ R + P + + IG+ + Sbjct: 71 AQIAGLSANYS---SLVDEVRRVR---ATPVVDAGTITITGMLDQIGRAVAGVAGTVAGL 124 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +LG V++ G F+ L S + M V VP+++LI+F+ G +IAQQG F Sbjct: 125 IDMLGAVLAAGGRVLIHPRSFR--LTSTVHHMEQVCWRAVPIIVLITFLIGCIIAQQGIF 182 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 +FGA+IF +D++ +L LREIGVLL A+M+AGRSGSA AE+GSMK+ EEIDA+RTMG Sbjct: 183 HFRRFGADIFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMKMREEIDALRTMG 242 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 D + +L+ PR+ AL+++LP+L L +A+ G +V W Y + F R ++ Sbjct: 243 FDPIEVLVLPRMLALVLALPILAFLGAMAALYGGGLVAWLYGGVDPEAFLLRLRDAISID 302 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + G++KAP MA IGIVA EG AV + SLG+ T VV+ I VI++D +FAIF+ Sbjct: 303 HFIVGIVKAPVMAAVIGIVACVEGLAVQGSAESLGQHTTASVVKGIFFVIVMDGVFAIFF 362 Query: 369 FAIGI 373 +IG+ Sbjct: 363 ASIGM 367 >gi|254487283|ref|ZP_05100488.1| ABC transporter, inner membrane subunit [Roseobacter sp. GAI101] gi|214044152|gb|EEB84790.1| ABC transporter, inner membrane subunit [Roseobacter sp. GAI101] Length = 369 Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 130/337 (38%), Positives = 203/337 (60%), Gaps = 12/337 (3%) Query: 41 IVDLSAITEIDTIGAELIMYFMEKYHG---KIKLQGVSTHIEQLFSLISFTHRK-KIKNQ 96 ++D+S +T IDT GA L++Y ++ ++++ G S QL ++ + I Sbjct: 41 VIDISGLTRIDTAGAWLLVYAQDRLAAPGKRVEITGTSDAQAQLIDVVRASMPPADIAEP 100 Query: 97 KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156 KP+ + + +G+ + + LG V++ +F+ L SL Sbjct: 101 KPK------TLADQVETLGRMVTSGARKTVELTSFLGQVVATMAGTLIHPRRFR--LTSL 152 Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + VG++ VP+V L+SF+ G V+A QGA QL QFGAE+F +DL++I LRE+G+LLT Sbjct: 153 VHHCQEVGLNAVPIVALMSFLIGVVLAFQGAVQLRQFGAEVFVVDLIAISVLRELGILLT 212 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A+++AGRSGSA A IGSMK+ EEIDA+RT+GLD V IL+ PR+ AL++ LP L +LA+ Sbjct: 213 AIIVAGRSGSAFTAAIGSMKMREEIDAMRTIGLDPVTILVVPRVLALMLMLPALGLLADI 272 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 S ++G +++ W + AVF SR + + G+IKAPF A IGI+ EG VG Sbjct: 273 SGLVGGAVMSWIELGVSPAVFQSRLVGNTDVWHFGVGMIKAPFFALIIGIIGCYEGMKVG 332 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + SLG+ +T VV SI +VI++D++F+IF+ +G+ Sbjct: 333 GDAESLGRLTSTSVVLSIFMVIVMDAMFSIFFAIVGV 369 >gi|260430754|ref|ZP_05784726.1| ABC transporter, inner membrane subunit [Silicibacter lacuscaerulensis ITI-1157] gi|260418195|gb|EEX11453.1| ABC transporter, inner membrane subunit [Silicibacter lacuscaerulensis ITI-1157] Length = 374 Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 122/346 (35%), Positives = 197/346 (56%), Gaps = 12/346 (3%) Query: 33 KSIQSDSA--IVDLSAITEIDTIGAELIMYFMEKYHG---KIKLQGVSTHIEQLFSLISF 87 +++ D+ + DLS + +DT GA LI + + + V+ L ++ Sbjct: 36 RALHPDAKRIVFDLSGLGSLDTGGAWLICDLARRASAAGATVTYENVTATQSALLETVAQ 95 Query: 88 THRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSY 147 +I + P R F +G++ V D+ S LGL + + Sbjct: 96 NIAAEIPAEAPPRGFV-----PWLESLGRRTVGAGRDTASMLSFLGLTLHRLARTLVMPW 150 Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 + + +L+ QM G+ +P+V L+ F+ G V+A QGA QL QFGAEIF ++L+SI Sbjct: 151 RLR--RAALVSQMEETGLKALPIVALMGFLIGVVLAFQGATQLKQFGAEIFVVELISISV 208 Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267 LRE+GVLLTA+++AGRSGSA A IGSMK+ EEIDA++T+GLD + +L+ PR+ AL+I L Sbjct: 209 LRELGVLLTAIIVAGRSGSAFTASIGSMKVQEEIDAMQTLGLDPIEVLVVPRVLALLIML 268 Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327 P+L +A+ + + G +++ W + +F +R + ++ GLIKAPF A I ++ Sbjct: 269 PILGFVADMAGLFGGALMSWIDLGVSPGMFVTRLKENTDVWHLAVGLIKAPFFAVVIAVI 328 Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 A + V S S+G++ T+ VVQ+I +VI ID+LF+IF+ +G+ Sbjct: 329 ACWQAMQVKGSSQSVGQRTTSSVVQAIFMVIAIDALFSIFFSEVGV 374 >gi|85373087|ref|YP_457149.1| ABC-type transport system permease component [Erythrobacter litoralis HTCC2594] gi|84786170|gb|ABC62352.1| ABC-type transport system permease component [Erythrobacter litoralis HTCC2594] Length = 370 Score = 216 bits (549), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 123/371 (33%), Positives = 206/371 (55%), Gaps = 14/371 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G TV R AG + I I D+ ++++ + VDL +++IDT+GA + Sbjct: 12 QDDGTTVLRLAGPYLVSTIGPIDQDL-----RALEGGFSAVDLGDVSQIDTVGAWMACTV 66 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + +I+ S +L + + K P+R F+ + G+++V+F Sbjct: 67 AGAHDAEIR--NASDRASRLIDAVQGSINKA--ETTPERDPL---FRRVAMMTGERVVEF 119 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 ++ G +++ G +F +L RQ+ VG++ +P++ L+SF+ G V Sbjct: 120 GHNLLDLLSFAGAIVAGFGRLLLHPGRFPH--KALFRQLELVGINALPIIGLMSFLIGIV 177 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IAQQGA QL QFGAE +++L+ + +RE+GVL+TA+M+AGRSGSA A+IG+MK+ EE+ Sbjct: 178 IAQQGAVQLEQFGAETLTVNLVGRITMRELGVLMTAIMVAGRSGSAFAAQIGTMKLTEEV 237 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+RT+G+ V L+ PRI A ++ +PLL + AI+G ++V IPF F R Sbjct: 238 DAMRTIGISPVEALVLPRILAAVLMMPLLGFYSACVAIVGGAVVSEFALGIPFWNFLERI 297 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 +++ GLIKAP + + +G V +S +G + T VVQ+I +VI++D Sbjct: 298 QDVVPTYDLWVGLIKAPVFGLIVALAGCYQGMQVRGNSEEVGSRTTKAVVQAIFMVIVLD 357 Query: 362 SLFAIFYFAIG 372 + FA+F+ IG Sbjct: 358 AFFAVFFTEIG 368 >gi|220924819|ref|YP_002500121.1| hypothetical protein Mnod_4961 [Methylobacterium nodulans ORS 2060] gi|219949426|gb|ACL59818.1| protein of unknown function DUF140 [Methylobacterium nodulans ORS 2060] Length = 386 Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 128/368 (34%), Positives = 209/368 (56%), Gaps = 16/368 (4%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 R +G W + + + + +DLS ++ +DT+GA + +E+ +I Sbjct: 27 RLSGRWTADQAPAVEAAAAGIAASPAGAGRIQIDLSGLSRLDTLGA----WVLERTRSEI 82 Query: 70 KLQGVSTHIEQLFSLISFTHR---KKIKNQKPQRSFFYN---SFKNLHYHIGKKIVKFIN 123 G + ++ HR +++ ++P+ + +L +G + + Sbjct: 83 AAAGRAVE----YAGARPEHRILLREVAYREPETAPARRRGLGPVDLLAGLGAGMRQLGA 138 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 + S LG V++ A F+ + + QM + + G P+++LI+F+ G ++ Sbjct: 139 EGLSWLGFLGEVVAACLRVLARPRSFR--RAAFVNQMEQIALRGTPIIMLIAFLVGCIVT 196 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 QQG QL +FGA+ F ++++ IL LRE+GVLLTA+M+AGRSGSA AEIGSM++ EE+DA Sbjct: 197 QQGIIQLQRFGAQSFVVNMIGILTLRELGVLLTAIMVAGRSGSAFTAEIGSMRMREEVDA 256 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R MGLD + ILI PRI AL+++LP+L LA+ +A+ G ++ Y ++ F +R + Sbjct: 257 LRVMGLDPIEILIVPRILALMMALPMLGFLADLAALAGGALTSLAYGNLSLDAFLARLQN 316 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + + GLIKAPFMA IGI+A EGF V + SLG+ VT VV+SI +VI++D + Sbjct: 317 AVSYRHALVGLIKAPFMALIIGIIATSEGFRVEGSAESLGRHVTASVVKSIFMVIVLDGV 376 Query: 364 FAIFYFAI 371 FAIF+ AI Sbjct: 377 FAIFFAAI 384 >gi|170743041|ref|YP_001771696.1| hypothetical protein M446_4933 [Methylobacterium sp. 4-46] gi|168197315|gb|ACA19262.1| protein of unknown function DUF140 [Methylobacterium sp. 4-46] Length = 394 Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 128/368 (34%), Positives = 205/368 (55%), Gaps = 16/368 (4%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 R G+W + + + VDLS + +DT+GA + +E+ +I Sbjct: 35 RLTGSWTADQAPAVEAAAAAIAAPGEPGPRVQVDLSGLVRLDTLGA----FVLERTRSEI 90 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKN------QKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + G + ++ HR ++ P + +G + + Sbjct: 91 EAAGRAVD----YAGARPEHRILLREVAYRRDTPPPPRRRRLGLLDGLEALGAGLRRLGA 146 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 + S LG V++ A +F+ S + QM + G P+++LI+F+ G ++ Sbjct: 147 EGLSWLGFLGEVVAACLRVLARPRRFRA--ASFVNQMEQIAYRGTPIIMLIAFLVGCIVT 204 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 QQG QL +FGA+ F ++++ IL LRE+GVLLTA+M+AGRSGSA AEIGSM++ EE+DA Sbjct: 205 QQGIIQLQRFGAQSFVVNMIGILTLRELGVLLTAIMVAGRSGSAFTAEIGSMRMREEVDA 264 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R MGLD + ILI PRI AL+++LP+L LA+ +A++G ++ Y ++ F F +R + Sbjct: 265 LRVMGLDPIEILIVPRILALMLALPMLGFLADVAALLGGALTSMAYGNLSFDAFLARLQA 324 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 ++ + G++KAPFMA IGI+A EGF V + SLG+ VT VV+SI +VI++D + Sbjct: 325 VISVRHGLVGMLKAPFMALIIGIIATSEGFRVEGSAESLGRHVTASVVKSIFMVIVLDGV 384 Query: 364 FAIFYFAI 371 FAIF+ AI Sbjct: 385 FAIFFAAI 392 >gi|312115045|ref|YP_004012641.1| hypothetical protein Rvan_2318 [Rhodomicrobium vannielii ATCC 17100] gi|311220174|gb|ADP71542.1| protein of unknown function DUF140 [Rhodomicrobium vannielii ATCC 17100] Length = 385 Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 111/271 (40%), Positives = 172/271 (63%), Gaps = 15/271 (5%) Query: 105 NSFKNLHYHIGKKIVK---FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY 161 F + IG+ ++ F+ ++ + LG V+ + G F + K F Q+ Sbjct: 126 RRFLSAATSIGRDAIRLTMFLGETTAA---LGRVVVHPGRF-----RIKAF----THQLQ 173 Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221 G+S VP++ L+SF+ G V+ QQ AFQL +FGAE SID++ IL LRE+GV+L AVM+A Sbjct: 174 QTGLSAVPIIALVSFLIGGVVMQQSAFQLQKFGAETMSIDMLGILALRELGVILAAVMVA 233 Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281 GRS SA A+IG+MK+ EEIDA+RT+G+D + L+ PR+ AL+I+LPLL LA+ A+ G Sbjct: 234 GRSASAFTAQIGTMKMREEIDAMRTLGIDPIETLVLPRVLALMIALPLLVFLADMMALAG 293 Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341 +++ Y + ++ R +S+ +++ GLIKAPF A IG+V EG + + S Sbjct: 294 GAVMAKLYLSLDTDMYLQRLNSSVQAKHLYVGLIKAPFAALVIGLVGCLEGLSAQGSAES 353 Query: 342 LGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 +G +VTT VV++I +V+++D++FAIF A G Sbjct: 354 VGTQVTTAVVKAIFLVLVLDAVFAIFLSAAG 384 >gi|84516868|ref|ZP_01004226.1| ABC transporter, inner membrane subunit [Loktanella vestfoldensis SKA53] gi|84509336|gb|EAQ05795.1| ABC transporter, inner membrane subunit [Loktanella vestfoldensis SKA53] Length = 380 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 125/343 (36%), Positives = 196/343 (57%), Gaps = 17/343 (4%) Query: 37 SDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK------LQGVSTHIEQLFSLISFTHR 90 S + +VD++ ++ +DT GA +F+ G+ + G S L + Sbjct: 49 SRAEVVDIAQLSHMDTAGA----WFLLDLAGRTSAGAASVITGASDAQTLLIEAVRTNLP 104 Query: 91 KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFK 150 K KP + F+ L G+++ + + LG VI+ + Sbjct: 105 PKAAGAKPAVRL-VDHFETL----GRRVALAGSHALEMLSFLGQVIAAMARVIRHPRALR 159 Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210 L S++ VG+ VP+V L++F+ G V+A QG+ QL QFGAE+F +DL++I LRE Sbjct: 160 --LTSVVHHCQQVGLQAVPIVALMAFLIGVVLAFQGSAQLRQFGAEVFVVDLIAISILRE 217 Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 +G+LLTA+++AGRSGSA A IGSMK+ EEIDA+RT+GLD V IL+ PR+ AL++ LP L Sbjct: 218 LGILLTAIIVAGRSGSAFTAAIGSMKMREEIDAMRTLGLDPVAILVVPRVLALVLMLPAL 277 Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330 ++AN S + G +++ W D+ AVF +R S + + G+IKAP A IGI+ Sbjct: 278 GLIANVSGLFGGALMSWIELDVSPAVFQARLVSNTDVWHFNVGMIKAPVFALIIGIIGCY 337 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 +G VG + SLG++ + VV +I +VI+ D+LF+IF+ +G+ Sbjct: 338 QGMKVGGDAESLGRQTSASVVMAIFMVIVADALFSIFFAIVGV 380 >gi|218886600|ref|YP_002435921.1| hypothetical protein DvMF_1505 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757554|gb|ACL08453.1| protein of unknown function DUF140 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 430 Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 124/373 (33%), Positives = 204/373 (54%), Gaps = 11/373 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINK-----SIQSDSAIV--DLSAITEIDTIGAELIMY 60 V F+G W I + ++ + S+Q D+ +V DL+ +T +DT GA+L+ Sbjct: 62 VLTFSGVWDVASIGRMTARLLRRCAEVGNACSVQGDAPVVHLDLAEVTRLDTAGAQLLCR 121 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 V H+ + + I R+ + IG IV+ Sbjct: 122 AAASM--ATAGARVVWHVSDHGQSMLLDRVRAIDISAVPRARRISPVVGALNAIGGSIVE 179 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + + + LG+ + + A ++ + +S++ M G+ VP+V L++F+ G Sbjct: 180 ELEQARAIIGFLGMFLVSLAAAVARPWRLR--WVSIVHHMEQTGIQAVPIVALLTFLIGL 237 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V A G+ Q ++FGA++F ++L+ + LRE+GVLLTA+++AGRSGS+ A+IG+M NEE Sbjct: 238 VTAYMGSEQFTRFGAQVFVVNLIEVSTLRELGVLLTALIVAGRSGSSFTAQIGAMVANEE 297 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +DA+R+MGLD + +L+ PR+ AL++ LP+LT +A+F ++G I W I F R Sbjct: 298 VDAMRSMGLDPMEVLVIPRVVALVLMLPVLTFIADFMGVLGGGIASWLSLGISPGAFAVR 357 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 F LAN TGL+KAPF A IGIV +GF V + S+G+ T VV+SI +VI+ Sbjct: 358 FQEITRLANFVTGLVKAPFFALIIGIVGCFQGFRVTGSAESVGRLTTQAVVESIFLVIVA 417 Query: 361 DSLFAIFYFAIGI 373 ++ FAI + ++G+ Sbjct: 418 NAGFAILFMSLGV 430 >gi|149187032|ref|ZP_01865339.1| ABC-type transport system permease component [Erythrobacter sp. SD-21] gi|148829321|gb|EDL47765.1| ABC-type transport system permease component [Erythrobacter sp. SD-21] Length = 369 Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 119/369 (32%), Positives = 206/369 (55%), Gaps = 14/369 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G +V +G + + + +D+ + + A +DLS ++EIDT+GA L Sbjct: 13 EGGSVLALSGPYLVSTVGAVDEDL-----RGLDEPLARIDLSEVSEIDTVGAWLACQLAS 67 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 ++ +I G S +L ++ + +++ + + + +G+K+ + Sbjct: 68 RHGAEIT--GASERATRLLGALT-----GMDSEQALSAPRLPVWSRVPEAMGEKMFNARS 120 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 + LG + + G + +F+ ++L+ Q+ VGVS +P++ L+SF+ G VIA Sbjct: 121 GAIGVISFLGAALISAGNLIRNPRRFR--TVALVHQVELVGVSALPIIGLMSFLIGIVIA 178 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 QQGA QL+ FGAE +++L+ + LRE+GVL+TA+M+AGRSGSA A++G+MK+ EE+DA Sbjct: 179 QQGAVQLAAFGAETLTVNLVGRITLRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEVDA 238 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +RT+G+ + L+ PRI + ++ +PLL A+ AIIG ++V IPF F SR Sbjct: 239 MRTIGISPMEALVIPRILSAVLMMPLLGFYASCMAIIGGAVVGDLMLGIPFWTFLSRIQE 298 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +++ GLIKAP +G+ G V +S +GK+ T VV +I VI++D+ Sbjct: 299 VVPTYDVWVGLIKAPVFGLIVGLAGCYNGMQVEGNSEEVGKRTTLSVVAAIFAVIVLDAF 358 Query: 364 FAIFYFAIG 372 FA+F+ +G Sbjct: 359 FAVFFTELG 367 >gi|159044594|ref|YP_001533388.1| hypothetical protein Dshi_2050 [Dinoroseobacter shibae DFL 12] gi|157912354|gb|ABV93787.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12] Length = 384 Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 125/338 (36%), Positives = 201/338 (59%), Gaps = 11/338 (3%) Query: 37 SDSAIVDLSAITEIDTIGAELIMYFMEKYHGK-IKLQGVSTHIEQLFSLISFTHRKKIKN 95 + S +DLS I IDT GA L+ E G+ ++L G + +L + ++ K + Sbjct: 57 AGSLTLDLSGIGRIDTAGAWLLA---ELARGEGVRLVGAPDKVARLIANVA-----KAEP 108 Query: 96 QKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLS 155 + P+R+ + + +G+++V+ +LGLV++ G +F+ + + Sbjct: 109 EHPERTETPPTLTDRLERLGRQVVEGTKFLGGLTGMLGLVLARFGRALRHPREFR--MTA 166 Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+ VG+ VP+V L++F+ G V+A QGA QL QFGAE+F +DL+SI LRE+G+LL Sbjct: 167 LVHHCEEVGLRAVPIVALMAFLIGIVLAFQGASQLRQFGAEVFVVDLISISILRELGILL 226 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA+++AGR+ S+ A IGSMK+ EEIDA+RT+GLD +L PR+ AL+I LP+L ++AN Sbjct: 227 TAIIVAGRTASSFTAAIGSMKMREEIDAMRTLGLDPAMLLFLPRVLALLIMLPILGLIAN 286 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 S ++G +++ W I A+F +R + + GL+KAPF A IG+V G V Sbjct: 287 LSGLLGGALMSWIELGISPAMFQTRLIEGTDINHAVVGLVKAPFFAILIGVVGCHAGMQV 346 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 ++ SLG+ + VV +I VI+ D+ F+IF+ +GI Sbjct: 347 EGNAESLGRMTSGAVVTAIFAVIVTDAAFSIFFAQMGI 384 >gi|304319773|ref|YP_003853416.1| hypothetical protein PB2503_00972 [Parvularcula bermudensis HTCC2503] gi|303298676|gb|ADM08275.1| hypothetical protein PB2503_00972 [Parvularcula bermudensis HTCC2503] Length = 380 Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 130/355 (36%), Positives = 201/355 (56%), Gaps = 13/355 (3%) Query: 25 DDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHI------ 78 D + A+N + D A +DLS I +DT GA ++ + G+ + Q ++T Sbjct: 33 DSKIRALNFGPREDLAEIDLSQIEALDTAGALMLQRLRHRCMGEGRPQAIATLTGMTDPQ 92 Query: 79 EQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISN 138 +L ++ H + P+R SF L +G+ + N+ + +G V++ Sbjct: 93 HELMERMA-AHIADCEGDPPRR----KSFILLLNRVGQGTIAVGNEGLAILSFVGSVVAR 147 Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198 S +F+ L + + M G++ +V L+SF+ GAV+A GA LS+FGAE+F Sbjct: 148 LAGTIMSPARFR--LTATVAHMEEAGLNSTLIVGLMSFLIGAVVAFMGARVLSEFGAEVF 205 Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258 S++L+ I LRE GVLLTA++IAGRSGSA A IGSMK+ EEIDA+R +G+ + LI P Sbjct: 206 SVELVGISVLREFGVLLTAILIAGRSGSAFTASIGSMKLREEIDAMRALGISPLDALILP 265 Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318 R AL+++LP+L LA F ++G +V W DIP +F R T+ N+F GL+KAP Sbjct: 266 RTIALVLTLPVLAFLAGFLGLLGGGVVGWLALDIPPQLFIGRLQEIVTVENLFVGLVKAP 325 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 F A I +V G +V + LG++ T VVQS+ +VI++D+LFA+ + + I Sbjct: 326 FFAFVIAVVGCYHGMSVENSAEELGRRTTMAVVQSLFLVILLDALFAMLFLELDI 380 >gi|260752530|ref|YP_003225423.1| hypothetical protein Za10_0287 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283856391|ref|YP_162753.2| hypothetical protein ZMO1018 [Zymomonas mobilis subsp. mobilis ZM4] gi|258551893|gb|ACV74839.1| protein of unknown function DUF140 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283775390|gb|AAV89642.2| protein of unknown function DUF140 [Zymomonas mobilis subsp. mobilis ZM4] Length = 366 Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 128/339 (37%), Positives = 185/339 (54%), Gaps = 15/339 (4%) Query: 37 SDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96 SD ++DLS + +DT GA L+ + + ++K G ++ + + IS R Sbjct: 38 SDVKVIDLSNLHRMDTAGAWLVHKLAQDNNAEVK--GTNSAVAHILDQISHYDRPLPPEP 95 Query: 97 KPQRSFFYNSF---KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFL 153 K Y KN H+ IV +N L++S C S + L Sbjct: 96 KAVSPLIYTLTGVGKNT-VHVWYTIVGLVN------FFGALLVSIWHTICHPS---RLRL 145 Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 ++I QM VGV+ + +V L+S + G VIAQQGA QL QFGAEI+SI+L+ L RE+GV Sbjct: 146 TAIICQMETVGVNALAIVGLMSILVGVVIAQQGAVQLRQFGAEIYSINLVGRLSFRELGV 205 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 L+TA+M+AGRSGSA A+IGSM + EEIDA+R +G+ + L+ PR A II +PLL Sbjct: 206 LMTAIMVAGRSGSAFAAQIGSMNLAEEIDAMRIIGVSPMESLVLPRFLASIIMMPLLGFY 265 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 A +A+IG ++ W DIP FF+R ++ GL+KAP I I +G Sbjct: 266 ATIAAVIGGGLLCWTVLDIPPTTFFTRLREVIPYTDVAVGLVKAPIFGALIAIAGCFQGT 325 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 V ++ LG T VV SI +VI++D+ FA+F+ IG Sbjct: 326 QVKGNAEQLGYCTTKAVVHSIFLVIVLDAFFAVFFSEIG 364 >gi|241761770|ref|ZP_04759856.1| protein of unknown function DUF140 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373684|gb|EER63244.1| protein of unknown function DUF140 [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 366 Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 128/339 (37%), Positives = 185/339 (54%), Gaps = 15/339 (4%) Query: 37 SDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96 SD ++DLS + +DT GA L+ + + ++K G ++ + + IS R Sbjct: 38 SDVKVIDLSNLHRMDTAGAWLVHKLAQDNNAEVK--GTNSAVAHILDQISHYDRPLPPEP 95 Query: 97 KPQRSFFYNSF---KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFL 153 K Y KN H+ IV +N L++S C S + L Sbjct: 96 KAVSPLIYTLTGVGKNT-VHVWYTIVGLVN------FFGALLVSIWHTICHPS---RLRL 145 Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 ++I QM VGV+ + +V L+S + G VIAQQGA QL QFGAEI+SI+L+ L RE+GV Sbjct: 146 TAIICQMETVGVNALAIVGLMSILVGVVIAQQGAVQLRQFGAEIYSINLVGRLSFRELGV 205 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 L+TA+M+AGRSGSA A+IGSM + EEIDA+R +G+ + L+ PR A II +PLL Sbjct: 206 LMTAIMVAGRSGSAFAAQIGSMNLAEEIDAMRIIGVSPMESLVLPRFLASIIMMPLLGFY 265 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 A +A+IG ++ W DIP FF+R ++ GL+KAP I I +G Sbjct: 266 ATIAAVIGGGLLCWTVLDIPPTTFFTRLREVIPYTDVAVGLVKAPIFGALIAIAGCFQGT 325 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 V ++ LG T VV SI +VI++D+ FA+F+ IG Sbjct: 326 QVKGNAEQLGYCTTKAVVHSIFLVIVLDAFFAVFFSEIG 364 >gi|163744195|ref|ZP_02151555.1| ABC transporter, inner membrane subunit [Oceanibulbus indolifex HEL-45] gi|161381013|gb|EDQ05422.1| ABC transporter, inner membrane subunit [Oceanibulbus indolifex HEL-45] Length = 376 Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 127/337 (37%), Positives = 199/337 (59%), Gaps = 9/337 (2%) Query: 39 SAIVDLSAITEIDTIGAELIMYFME--KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96 ++++D++ + IDT GA +++ G L+G + QL + + Sbjct: 47 ASVIDIAGLARIDTAGAWVLIDLQAHATVPGGAALEGATQAQAQLIETVRRSMLSDAVAA 106 Query: 97 KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156 P +S + +G+ +V + + + LG V++ G A + + L SL Sbjct: 107 PPTKSV-----GDRLEILGRTVVLGAHKTVALISFLGQVVATMGGILAHPSRLR--LTSL 159 Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + VG++ VP+V L+SF+ G V+A QGA QL QFGAE+F +DL++I LRE+G+LLT Sbjct: 160 VHHCQEVGLNAVPIVALMSFLIGVVLAFQGAAQLRQFGAEVFVVDLIAISVLRELGILLT 219 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A+++AGRSGSA A IGSMK+ EE+DA+RT+GLD V IL+ PR+ AL++ LP L +A+ Sbjct: 220 AIIVAGRSGSAFTAAIGSMKMREEVDAMRTIGLDPVTILVVPRVLALMLMLPALGFIADI 279 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 S ++G +I+ W + AVF R S + + G+IKAPF A IGI+ EG VG Sbjct: 280 SGLLGGAIMSWIDLGVSPAVFQMRLTSNTDVWHFGVGMIKAPFFALIIGIIGCFEGLKVG 339 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + SLG+ +T VV SI +VI+ D++F+IF+ +G+ Sbjct: 340 GDAESLGRLTSTSVVLSIFMVIVADAMFSIFFAIVGV 376 >gi|87200858|ref|YP_498115.1| hypothetical protein Saro_2845 [Novosphingobium aromaticivorans DSM 12444] gi|87136539|gb|ABD27281.1| protein of unknown function DUF140 [Novosphingobium aromaticivorans DSM 12444] Length = 372 Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 116/340 (34%), Positives = 192/340 (56%), Gaps = 8/340 (2%) Query: 33 KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKK 92 + I A +DLSA+T +DT+GA + + + + G ++ S ++L IS Sbjct: 39 RHITDPVARIDLSAVTAMDTVGAWTV-WRLSRDTGA-EIVACSEEAQKLVDAISKADSNA 96 Query: 93 IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGF 152 + P+ F + + +G ++ + LG VI G +F+ Sbjct: 97 HSIEPPRLPLF----QRVPEKVGDAMIGLGLGAVQVLGFLGQVILAIGTLVRHPSRFR-- 150 Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 + +L+ QM VGV+ + ++ L+SF+ G VIAQQGA QL QFGAEI++++L+ L LRE+G Sbjct: 151 MKALVHQMELVGVNALAIIGLMSFLVGIVIAQQGAVQLRQFGAEIYTVNLVGRLTLRELG 210 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 VL+TA+M+AGRSGSA A++G+MK+ EE+DA+RT+G+ + L+ PRI A ++ +PLL Sbjct: 211 VLMTAIMVAGRSGSAFAAQLGTMKLTEEVDAMRTIGVSPMEALVVPRILATMVMMPLLGF 270 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 + F IIG + + IPF F +R L +++ G+ KAP + + +G Sbjct: 271 YSAFIGIIGGAFLSSLTLGIPFFTFLARIQEVVPLHDVWVGITKAPVFGLIVAVAGCYQG 330 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 V ++ +G + T VV +I +VI++D+ FA+F+ IG Sbjct: 331 MQVKTNAEEVGTRTTAAVVMAIFMVIVLDAFFAVFFTEIG 370 >gi|149374946|ref|ZP_01892719.1| putative permease of ABC transporter [Marinobacter algicola DG893] gi|149360835|gb|EDM49286.1| putative permease of ABC transporter [Marinobacter algicola DG893] Length = 374 Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 120/364 (32%), Positives = 205/364 (56%), Gaps = 10/364 (2%) Query: 12 AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EKYHGK 68 +G+W P + DV A+ K + D V+L+ I +DT GA L++ + E + Sbjct: 17 SGDWTLPNYGSLKRDVQNAVLKEV-PDGHSVNLATINALDTAGASLLVDLLGAHELHELT 75 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + +S+ ++L L++ + + + +++F N IG+ I F + Sbjct: 76 EQTPELSSERQELLRLVA----NAMASPEGEKAFCSNPITEFLAGIGENIEDFWHQQRLL 131 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 G +++ A+ ++++ + SL+ ++ G++ +P+V L++F+ GAV+A GA Sbjct: 132 IGFTGQILATLASILATPWRWR--ITSLVAHVHQTGLNALPIVALLTFLVGAVVAFLGAT 189 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L FGA I++++L++ LRE GVLL A+++AGR+ SA A++GSMK NEEIDA+RT G Sbjct: 190 ILDDFGATIYTVNLVAFSFLREFGVLLAAILLAGRTASAFTAQLGSMKANEEIDALRTFG 249 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 L V +L+ PR+ A++ISLP+LT + S IIG S+V DI + + + Sbjct: 250 LSPVELLVIPRVLAMVISLPILTFVGMISGIIGGSVVCVLALDISVPQILNILETKVKVV 309 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 ++ GL KAP A I ++ EGF + S+G+ T+ VVQSI +VI++DS+ AIF+ Sbjct: 310 HLLVGLGKAPVFAFVIAVIGCLEGFKASGSAQSVGEHTTSAVVQSIFMVILLDSIAAIFF 369 Query: 369 FAIG 372 +G Sbjct: 370 MEMG 373 >gi|119385048|ref|YP_916104.1| hypothetical protein Pden_2317 [Paracoccus denitrificans PD1222] gi|119374815|gb|ABL70408.1| protein of unknown function DUF140 [Paracoccus denitrificans PD1222] Length = 364 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 119/332 (35%), Positives = 189/332 (56%), Gaps = 10/332 (3%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 ++LS +T +DT A Y + L G++ QL + ++ Q S Sbjct: 43 LELSGLTRLDTAAA---WYLTGREREGASLDGLTGTQAQLLDTV-----RQALPQPEAES 94 Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY 161 ++ + G+++V + A LG ++ F+ SL+ Sbjct: 95 AGPAGWRLMLEQTGRRMVAALVFLREIAEYLGRFLAALARGIRHPGDFR--FTSLVYHCQ 152 Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221 G+ VP+V L+SF+ G V+A QGA QL QFGAE+F IDL++I LRE+G+LLTA+++A Sbjct: 153 ETGLRAVPIVALMSFLIGIVLAFQGAVQLRQFGAEVFVIDLIAISILRELGILLTAIIVA 212 Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281 GR+ SA+ A IGSMK+NEEIDA+RT+GLD +LI PR+ ALII+LP+L ++AN + ++G Sbjct: 213 GRTASALTASIGSMKMNEEIDAMRTLGLDPDMVLILPRVLALIITLPILGLIANIAGLVG 272 Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341 +++ W I ++F R + ++ ++ GL KAP A IG++ G VG + S Sbjct: 273 GALMSWIELGISPSMFRYRLLADTSVDHVIVGLSKAPVFALIIGVIGCHAGMKVGKDAES 332 Query: 342 LGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 LG + + VV +I VI+ D+LF+IF+ +G+ Sbjct: 333 LGAETSRAVVNAIFAVIVADALFSIFFSEVGL 364 >gi|209964745|ref|YP_002297660.1| ABC transporter, permease protein, putative [Rhodospirillum centenum SW] gi|209958211|gb|ACI98847.1| ABC transporter, permease protein, putative [Rhodospirillum centenum SW] Length = 384 Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 124/364 (34%), Positives = 197/364 (54%), Gaps = 9/364 (2%) Query: 12 AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKL 71 G W + + D + + S +DLS + +DT GA LI E+ + Sbjct: 28 GGRWDLSAVPRL-DQRLRTAGPDRPASSVCIDLSGLVALDTAGALLIDRLAERLRAEGHT 86 Query: 72 QGVSTHIEQLFSLISFTHRKKIKNQK--PQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 + L +L+ R + P+ Y +L +G+ V+ D+ Sbjct: 87 VAIVGARPDLCALLREVRRASRADSPALPR----YEPMHDLLERVGRATVEAGQDAAKLL 142 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 LG+V +F+ + + + VG++ +P+V L+SF+ G V+A QGA Q Sbjct: 143 GFLGMVTVTALRLVRQPRRFR--MTPFVFHLEQVGLNALPIVGLLSFLIGIVLAYQGADQ 200 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L FGAEIF ++L+ I LREIG+L+T++++AGRSGSA A+IG+MK+N+E+DA+RT+GL Sbjct: 201 LRLFGAEIFVVNLLGIGVLREIGILMTSIIVAGRSGSAFTAQIGTMKVNQEVDAMRTLGL 260 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 D V +L+ PR+ AL+++LPLL AN A+ G +++ + Y DI F F + Sbjct: 261 DPVELLVLPRLLALMVALPLLGFYANVVALFGGAVMAYSYLDITFGQFLKQLQLAVNETT 320 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 +F GL+KAP A I +V EG V + S+G+ T VV SI +VI++D+LF+I + Sbjct: 321 LFVGLVKAPVFAIVIALVGCYEGLRVTGSAQSVGQLTTRSVVVSIFLVIVLDALFSILFS 380 Query: 370 AIGI 373 +GI Sbjct: 381 YLGI 384 >gi|312958198|ref|ZP_07772721.1| ABC transport system permease protein [Pseudomonas fluorescens WH6] gi|311287629|gb|EFQ66187.1| ABC transport system permease protein [Pseudomonas fluorescens WH6] Length = 382 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 126/368 (34%), Positives = 205/368 (55%), Gaps = 17/368 (4%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDS-AIVDLSAITEIDTIGAELIMYFMEKYH 66 + R G+W ++ A+ +A Q D+ A +DL+ + +DT GA L++ + Sbjct: 20 LLRITGDWT---LAHYANLKKLADKLDGQYDAGARIDLNGLGALDTAGASLLVELL---- 72 Query: 67 GKIKLQGVSTHIEQLFS-----LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 G +++ + + S L+ +R P+++ + L IG+ + Sbjct: 73 GPTRIEQSAEQTDCTLSAADRALLKTVYRSLNDFCVPEKAPEETAGMQLLARIGRAVDTV 132 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLS-LIRQMYYVGVSGVPVVILISFVTGA 180 DS +GL++ F ++ K + ++ ++ + VG+ P+V L++F+ GA Sbjct: 133 WQDSKQLLGFIGLILET---FARGIFRPKRWRITPMVAHLEQVGLDAAPIVALLTFLVGA 189 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A GA L FGA IF++DL++ LRE GVLLTA++IAGR+ SA A+IGSMK NEE Sbjct: 190 VVAFLGATVLKSFGATIFTVDLVAFSFLREFGVLLTAILIAGRTASAFTAQIGSMKANEE 249 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDAIRT+GLD + +L+ PR+ AL+++LP+LT LA S I+G +V DI A+F S Sbjct: 250 IDAIRTLGLDPMELLVLPRVLALLVALPMLTFLAMLSGIVGGGVVCAVALDISPAMFLSL 309 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 S + + G++KAP A I + EGF V + S+G T+ VVQSI +VI++ Sbjct: 310 LQSDIGVQHFLVGMVKAPIFAFLIAAIGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVL 369 Query: 361 DSLFAIFY 368 D++ A+F+ Sbjct: 370 DAVAALFF 377 >gi|119897565|ref|YP_932778.1| putative ABC transporter permease [Azoarcus sp. BH72] gi|119669978|emb|CAL93891.1| putative ABC transporter permease protein [Azoarcus sp. BH72] Length = 380 Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 125/357 (35%), Positives = 197/357 (55%), Gaps = 11/357 (3%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 ++ G V R +G+W IAD V A+ ++Q +A VD S + +DT GA L++ Sbjct: 13 LAAAGGGVLRLSGDWTLAHYRSIAD-TVSALRANVQHGTA-VDASGLGALDTAGASLLVQ 70 Query: 61 FMEKYHGKIKLQGVSTH---IEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 + G LQ +ST + +L+ +P+ + ++ ++ HIG Sbjct: 71 LL----GHDGLQALSTDPALAPERRALLRAVADALATPPEPEPADTGSALGDVLEHIGIA 126 Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + F + +GL + + A +++ L +L + + VP+V L++F+ Sbjct: 127 MGVFWRHAVGLLGFIGLTLESAFRIIAQPARWR--LTALAANLEKTALDAVPIVALLTFL 184 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 GAV+A GA L+ FGA IF++DL++ LRE GVLLTA+++AGR+ SA A+IGSMK Sbjct: 185 VGAVVAFLGATVLADFGASIFTVDLVAFSFLREFGVLLTAILVAGRTASAFTAQIGSMKA 244 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 NEEIDAIR +GLD V +L+ PR++AL+++LP+LT +A S I+G +V DI +F Sbjct: 245 NEEIDAIRVLGLDPVELLVLPRVYALLLALPMLTFVAMLSGIVGGMLVCALTLDISPVMF 304 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 S F + L + G+ KAP A I ++ EGF V + S+G+ T+ VVQSI Sbjct: 305 LSIFENDVGLRHFIVGIAKAPIFAFLIAVIGCLEGFKVSGSAQSVGEHTTSAVVQSI 361 >gi|70733612|ref|YP_257252.1| ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68347911|gb|AAY95517.1| ABC transporter, permease protein, putative [Pseudomonas fluorescens Pf-5] Length = 382 Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 127/372 (34%), Positives = 200/372 (53%), Gaps = 19/372 (5%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G+W S++ + +++ S + I DL+ + +DT GA L++ + G Sbjct: 21 LRIGGDWTLAHYSDL-KRLSQSLDGRYDSSTHI-DLNGLGALDTAGASLLVELL----GA 74 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFK--------NLHYHIGKKIVK 120 +L + H + +S R + + F K L IG + Sbjct: 75 ERLGQSAEHPD---CTLSAADRALLHTVYTSLNDFCVPVKEPEISVSVQLLSRIGSAVYT 131 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 D+ +GL++ +++ + ++ + G+ P+V L++F+ GA Sbjct: 132 VWQDTLKVLGFIGLILETLARGLLRPKRWR--ITPVVAHIEQTGLDAAPIVALLTFLVGA 189 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A GA L+ FGA IF++DL++ LRE GVLLTA+++AGR+ SA A+IGSMK NEE Sbjct: 190 VVAFLGATVLANFGASIFTVDLVAFSFLREFGVLLTAILMAGRTASAFTAQIGSMKANEE 249 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDAIRT+GLD V +L+ PR+ AL++SLP+LT LA S I+G ++V DI A+F S Sbjct: 250 IDAIRTLGLDPVELLVLPRVLALLVSLPMLTFLAMLSGIVGGAVVCALSLDISPAMFLSL 309 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 HS + + GL+KAP A I + EGF V + S+G T+ VVQSI +VI+I Sbjct: 310 LHSDIGVKHFLLGLVKAPIFAFLIAAIGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVI 369 Query: 361 DSLFAIFYFAIG 372 D++ A+F+ +G Sbjct: 370 DAVAALFFMEMG 381 >gi|288962789|ref|YP_003453083.1| ABC transport system permease protein [Azospirillum sp. B510] gi|288915055|dbj|BAI76539.1| ABC transport system permease protein [Azospirillum sp. B510] Length = 401 Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 120/365 (32%), Positives = 198/365 (54%), Gaps = 10/365 (2%) Query: 12 AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK--- 68 AG W + E++ A D + + +DLS + +DT+GA L+ ++ Sbjct: 44 AGRW-TLEVAAAASDALDHAAPPRDGAALRLDLSGVEALDTVGAYLLSRQADRMAADGRA 102 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 +++ GV LF + K +R ++ ++ G+ V + Sbjct: 103 VEVVGVRPEHAALFDAVR--DAGKAPPHPIERE--HHPIHDMVVRTGETTVHAAREVLDL 158 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LGLV + + L S++ + G++ +P++ L+SF+ G V+A QGA Sbjct: 159 VGFLGLVTVTFVRLILRPSRLR--LTSVLFHIEQTGLNALPILGLLSFLIGVVLAFQGAD 216 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 QL +FGAE++ ++L+ I LREIG+L+TA+++AGRSGSA A+IG+MK+N+E+DAI TMG Sbjct: 217 QLKRFGAELYVVNLLGISVLREIGILMTAIIVAGRSGSAFTAQIGTMKVNQEVDAIGTMG 276 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD V +L+ PR AL+I+LPLL A+ + G +++ + DI F F + HS + Sbjct: 277 LDPVELLVVPRALALVITLPLLAFYADVMGLFGGAVMAYATLDITFGQFIRQLHSAIGIN 336 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + GLIKAP A I +V EG V + S+G T VV+ I +VI+ID++F++ + Sbjct: 337 TVLAGLIKAPVFALVIAMVGCYEGLKVSGSAESVGIMTTKAVVEGIFLVIVIDAVFSVLF 396 Query: 369 FAIGI 373 +G+ Sbjct: 397 SLLGV 401 >gi|311232876|gb|ADP85730.1| protein of unknown function DUF140 [Desulfovibrio vulgaris RCH1] Length = 401 Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 119/367 (32%), Positives = 198/367 (53%), Gaps = 8/367 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + RF+G W + A + + + DL+ + +DT GA +I F Sbjct: 42 ILRFSGAWDVATAAR-ARGQLQHLAIPAECGDLTFDLTGVLRLDTAGALVITTF----RT 96 Query: 68 KIKLQGVSTHIEQLFSLISFTHR-KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 ++ QG++ + + + R I + ++ IG IV+ + Sbjct: 97 ALEKQGIAPLLHCAPAHNALIDRVAAIDMSEAPTVRHASALARTLNAIGASIVEETEQAV 156 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 +G+++ + ++F+ +SL M GV VP+V L+SF+ G V A G Sbjct: 157 GILAFMGMLVISLVGLVLRPWRFR--WVSLCSHMEQTGVQAVPIVALLSFLIGLVTAYMG 214 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A Q ++FGA++F I+L+ I LRE+GVLLTA+++AGRSGS+ A+IG+M NEE+ A+R Sbjct: 215 AEQFARFGAQVFVINLLEISTLREMGVLLTALVVAGRSGSSFTAQIGAMVANEEVSAMRA 274 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +GLD + +L+ PR+ AL++ LP+L +A+ I+G + W I A F +RFH Sbjct: 275 LGLDPIEVLVVPRVLALVVMLPILAFIADIMGILGGGVAAWGTLGIDPANFTARFHEIVH 334 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L N G+IKAPF A I +V +GF V + S+G+ T VV++I +VI++++LFAI Sbjct: 335 LRNFVVGMIKAPFFALVIALVGCFQGFRVTGSAESVGRLTTQAVVEAIFMVIVLNALFAI 394 Query: 367 FYFAIGI 373 + ++G+ Sbjct: 395 LFTSLGV 401 >gi|163793381|ref|ZP_02187356.1| ABC transporter, inner membrane subunit [alpha proteobacterium BAL199] gi|159181183|gb|EDP65698.1| ABC transporter, inner membrane subunit [alpha proteobacterium BAL199] Length = 391 Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 120/375 (32%), Positives = 214/375 (57%), Gaps = 12/375 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + +G V R G W + + + D + A+ + S VD ++++ +D+ GA +I Sbjct: 26 TRDGTLVVRLRGPW-TLQTALSVDAAIRALADRAAA-SVTVDATSLSRLDSAGAWVIQRT 83 Query: 62 MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + ++ + +++ G+ ++ + + + P S N +G++ Sbjct: 84 VAQFDRRGVPVEIVGLDEGLQAILDKAAEHDQSADIAPAPTSSLL-----NFLERLGRRS 138 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 V+ ++ + +LG+V+ +G +G +++ Q+ GV+ +P+V L+ F+ Sbjct: 139 VEGLHTGRNLLGLLGVVVVASGRIVVRPMTLRG--TAVVAQIEATGVTALPIVGLLCFLV 196 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G V+A GA QL++FGA +++L+ I LREIG+LLTA+++AGRSGSA A+IG+MK+N Sbjct: 197 GVVLAYMGALQLTRFGAANLTVNLVGISVLREIGILLTAIIVAGRSGSAFAAQIGTMKVN 256 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 +EIDA+ TMGL + +L+ PR+ ALII LP LT+ A+ + ++G ++V D+ F Sbjct: 257 QEIDALETMGLSVIDVLVLPRVIALIIVLPALTVFADVAGLVGGAMVCMFQLDMTIGQFL 316 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 ++ + T+ + TGLIKAP A AI +V G V + S+G++ T VV+SI +VI Sbjct: 317 TQLSAGVTVWSFATGLIKAPVFALAIALVGCHSGLGVSGSAESVGRQTTRAVVESIFLVI 376 Query: 359 IIDSLFAIFYFAIGI 373 I++++FAI + IGI Sbjct: 377 ILNAIFAIAFAKIGI 391 >gi|148555653|ref|YP_001263235.1| hypothetical protein Swit_2742 [Sphingomonas wittichii RW1] gi|148500843|gb|ABQ69097.1| protein of unknown function DUF140 [Sphingomonas wittichii RW1] Length = 365 Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 120/340 (35%), Positives = 192/340 (56%), Gaps = 27/340 (7%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 +DL + IDT+GA L+ ++ +++ G + QL I+ K +K + Sbjct: 42 IDLGEVDRIDTVGAWLVHRIAREH--DVEIVGADADVCQLIEQIAEAD-KPLKIRPDSSP 98 Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQA-HILGLVISNTGEFCASSYKFKGFLL------ 154 F+ ++++ I D+ S A H L +I G F A+ G + Sbjct: 99 PFF------------RVLREIGDATSAAAHSLAGLI---GFFGATLIGLWGLVTHPRRFR 143 Query: 155 --SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 ++ RQ VGV + ++ L+SF+ G VIAQQGA QL QFGAE+F+++L+ + LRE+G Sbjct: 144 YNAMARQFEVVGVKALAIIGLMSFLIGIVIAQQGAVQLRQFGAEVFAVNLIGRITLRELG 203 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 VL+TA+M+AGRSGSA A++GSMK+ EE+DA+RT+G+ + LI PR+ + ++ +PLL Sbjct: 204 VLMTAIMVAGRSGSAFAAQLGSMKLAEEVDAMRTIGVSPMEALILPRVLSTVVLMPLLGF 263 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 A AIIG I W DIP + R + +++ GLIKAP I + +G Sbjct: 264 YAAVIAIIGGGIFCWIDLDIPPITYVQRIREVVPMTDLWVGLIKAPVFGMLIALCGCYQG 323 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 V ++ +G + T VVQ+I +VI++D++FA+F+ +IG Sbjct: 324 MQVEGNAEEVGLRTTASVVQAIFLVIVLDAVFAVFFSSIG 363 >gi|46579026|ref|YP_009834.1| STAS domain-containing protein [Desulfovibrio vulgaris str. Hildenborough] gi|46448439|gb|AAS95093.1| STAS domain protein [Desulfovibrio vulgaris str. Hildenborough] Length = 406 Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 119/367 (32%), Positives = 198/367 (53%), Gaps = 8/367 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + RF+G W + A + + + DL+ + +DT GA +I F Sbjct: 47 ILRFSGAWDVATAAR-ARGQLQHLAIPAECGDLTFDLTGVLRLDTAGALVITTF----RT 101 Query: 68 KIKLQGVSTHIEQLFSLISFTHR-KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 ++ QG++ + + + R I + ++ IG IV+ + Sbjct: 102 ALEKQGIAPLLHCAPAHNALIDRVAAIDMSEAPTVRHASALARTLNAIGASIVEETEQAV 161 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 +G+++ + ++F+ +SL M GV VP+V L+SF+ G V A G Sbjct: 162 GILAFMGMLVISLVGLVLRPWRFR--WVSLCSHMEQTGVQAVPIVALLSFLIGLVTAYMG 219 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A Q ++FGA++F I+L+ I LRE+GVLLTA+++AGRSGS+ A+IG+M NEE+ A+R Sbjct: 220 AEQFARFGAQVFVINLLEISTLREMGVLLTALVVAGRSGSSFTAQIGAMVANEEVSAMRA 279 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +GLD + +L+ PR+ AL++ LP+L +A+ I+G + W I A F +RFH Sbjct: 280 LGLDPIEVLVVPRVLALVVMLPILAFIADIMGILGGGVAAWGTLGIDPANFTARFHEIVH 339 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L N G+IKAPF A I +V +GF V + S+G+ T VV++I +VI++++LFAI Sbjct: 340 LRNFVVGMIKAPFFALVIALVGCFQGFRVTGSAESVGRLTTQAVVEAIFMVIVLNALFAI 399 Query: 367 FYFAIGI 373 + ++G+ Sbjct: 400 LFTSLGV 406 >gi|77456265|ref|YP_345770.1| hypothetical protein Pfl01_0037 [Pseudomonas fluorescens Pf0-1] gi|77380268|gb|ABA71781.1| putative ABC transport system, permease [Pseudomonas fluorescens Pf0-1] Length = 382 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 122/369 (33%), Positives = 199/369 (53%), Gaps = 13/369 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G+W +E+ + +N +++ I DL+ + +DT GA L++ + G Sbjct: 21 LRVTGDWTLAHYAEL-KQLSETLNGQYDANTPI-DLNGLGALDTAGASLLVELL----GS 74 Query: 69 IKLQGVSTHIEQLFS-----LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 +L + H + S L+ +R P + + L IG+ + Sbjct: 75 ERLGKSAEHPDCTISSADRALLQTVYRSLTDFCVPIKEPEISVSVQLLTRIGRAVDTVWQ 134 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 D+ +GL++ +++ + +I + G+ P+V L++F+ GAV+A Sbjct: 135 DTLQLLGFVGLILETIARSLFRPKRWR--ITPMIAHIEQTGLDAAPIVALLTFLVGAVVA 192 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 GA L+ FGA +F++DL+ LRE GVLLTA+++AGR+ SA A+IGSMK NEEIDA Sbjct: 193 FLGATVLASFGASVFTVDLVGFAFLREFGVLLTAILMAGRTASAFTAQIGSMKANEEIDA 252 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 IRT+GLD + +L+ PR+ AL+++LP+LT LA I+G ++V DI A+F S S Sbjct: 253 IRTLGLDPMELLVVPRVLALLVALPMLTFLAMICGIVGGAVVCAVSLDISPAMFLSLLQS 312 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + + GL+KAP A I + EGF V + S+G T+ VVQSI +VI++D++ Sbjct: 313 DIGIQHFLVGLVKAPIFAFLIAAIGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVLDAV 372 Query: 364 FAIFYFAIG 372 A+F+ +G Sbjct: 373 AALFFMEMG 381 >gi|229587675|ref|YP_002869794.1| putative ABC transporter permease [Pseudomonas fluorescens SBW25] gi|229359541|emb|CAY46382.1| putative ABC transport system, permease [Pseudomonas fluorescens SBW25] Length = 382 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 125/370 (33%), Positives = 202/370 (54%), Gaps = 15/370 (4%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDS-AIVDLSAITEIDTIGAELIMYFMEKYHG 67 R G+W ++ A ++ Q D+ A +DL+ + +DT GA L++ + G Sbjct: 21 LRITGDWT---LAHYASLKKLSDKLDGQYDAGARIDLNGLGALDTAGASLLVELL----G 73 Query: 68 KIKLQGVSTHIEQLFS-----LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 +++ + + S L+ +R P+++ + + IG+ + Sbjct: 74 PTRIEQSAEQTDCSLSAADRALLKTVYRSLNDFCVPEKAPEEAAGIQVLARIGRAVDTVW 133 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 DS +GL++ +++ L ++ + VG+ P+V L++F+ GAV+ Sbjct: 134 QDSKQLLGFIGLILETFARGIFRPRRWR--LTPMVAHLEQVGLDAAPIVALLTFLVGAVV 191 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A GA L FGA IF++DL++ LRE GVLLTA++IAGR+ SA A+IGSMK NEEID Sbjct: 192 AFLGATVLKSFGATIFTVDLVAFSFLREFGVLLTAILIAGRTASAFTAQIGSMKANEEID 251 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 AIRT+GLD + +L+ PR+ AL+++LP+LT LA S I+G +V DI A+F S Sbjct: 252 AIRTLGLDPMELLVLPRVLALLVALPMLTFLAMLSGIVGGGVVCAVALDISPAMFLSLLQ 311 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 S + + GL+KAP A I + EGF V + S+G T+ VVQSI +VI++D+ Sbjct: 312 SDIGVQHFLVGLVKAPIFAFLIAAIGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVLDA 371 Query: 363 LFAIFYFAIG 372 + A+F+ +G Sbjct: 372 VAALFFMEMG 381 >gi|120603385|ref|YP_967785.1| hypothetical protein Dvul_2342 [Desulfovibrio vulgaris DP4] gi|120563614|gb|ABM29358.1| protein of unknown function DUF140 [Desulfovibrio vulgaris DP4] Length = 406 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 119/367 (32%), Positives = 197/367 (53%), Gaps = 8/367 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + RF+G W + A + + + DL+ + +DT GA +I F Sbjct: 47 ILRFSGAWDVATAAR-ARGQLQHLAIPAECGDLTFDLTGVLRLDTAGALVITTF----RT 101 Query: 68 KIKLQGVSTHIEQLFSLISFTHR-KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 ++ QG++ + + + R I + ++ IG IV+ + Sbjct: 102 ALEKQGIAPLLHCAPAHNALIDRVAAIDMSEAPTVRHASALARTLNAIGASIVEETEQAV 161 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 +G+ + + ++F+ +SL M GV VP+V L+SF+ G V A G Sbjct: 162 GILAFMGMFVISLVGLVLRPWRFR--WVSLCSHMEQTGVQAVPIVALLSFLIGLVTAYMG 219 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A Q ++FGA++F I+L+ I LRE+GVLLTA+++AGRSGS+ A+IG+M NEE+ A+R Sbjct: 220 AEQFARFGAQVFVINLLEISTLREMGVLLTALVVAGRSGSSFTAQIGAMVANEEVSAMRA 279 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +GLD + +L+ PR+ AL++ LP+L +A+ I+G + W I A F +RFH Sbjct: 280 LGLDPIEVLVVPRVLALVVMLPILAFIADIMGILGGGVAAWGTLGIDPANFTARFHEIVQ 339 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L N G+IKAPF A I +V +GF V + S+G+ T VV++I +VI++++LFAI Sbjct: 340 LRNFVVGMIKAPFFALVIALVGCFQGFRVTGSAESVGRLTTQAVVEAIFMVIVLNALFAI 399 Query: 367 FYFAIGI 373 + ++G+ Sbjct: 400 LFTSLGV 406 >gi|217969575|ref|YP_002354809.1| hypothetical protein Tmz1t_1154 [Thauera sp. MZ1T] gi|217506902|gb|ACK53913.1| protein of unknown function DUF140 [Thauera sp. MZ1T] Length = 385 Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 120/378 (31%), Positives = 210/378 (55%), Gaps = 15/378 (3%) Query: 1 MSENGIT-VFRFAGNWK---SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAE 56 ++ +G+ V R G+W + AD + I+ + + V+L+ + +DT GA Sbjct: 16 LAGDGVAAVLRLRGDWTLAHHAALRRQADALRGRIDAATR-----VELAELGTLDTAGAR 70 Query: 57 LIMYFM--EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI 114 L+ + E+ + +G + E+ L + + + ++P Y + ++ HI Sbjct: 71 LLHGLLGGERVAALLADEGALSR-ERRALLKAVADAIEGREERPAADEGY-ALGDVLAHI 128 Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 G ++ F + +GL++ +++ + +L+ + G+ VP++ L+ Sbjct: 129 GHTMLVFWRHVSALTGFIGLILETALRVSVQPRRWR--VTALVANLERTGLDAVPIIALL 186 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 +F+ GAV+A GA L FGA IF++DL++ LRE GVLLTA+++AGR+ S+ A+IGS Sbjct: 187 TFLVGAVVAFLGATVLQNFGASIFTVDLVAYSFLREFGVLLTAIIVAGRTASSFTAQIGS 246 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 M+ NEEIDAIR +GLD V +L+ PR++AL+++LP+LT +A + I+G +V DI Sbjct: 247 MRANEEIDAIRVLGLDPVELLVLPRVYALLVALPILTFVAMIAGIVGGMLVSAMTLDISP 306 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 +F SR L + + G+ KAP A I ++ EGF V + S+G+ T+ VVQSI Sbjct: 307 VLFLSRIEDNVGLIHFWVGMAKAPIFAFLIAVIGCLEGFRVQGSAQSVGEHTTSAVVQSI 366 Query: 355 SIVIIIDSLFAIFYFAIG 372 +VI++D++ A+F +G Sbjct: 367 FVVIVVDAIAALFCMEMG 384 >gi|188993114|ref|YP_001905124.1| ABC transporter permease [Xanthomonas campestris pv. campestris str. B100] gi|167734874|emb|CAP53086.1| ABC transporter permease [Xanthomonas campestris pv. campestris] Length = 370 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 122/367 (33%), Positives = 202/367 (55%), Gaps = 21/367 (5%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 R AG+W A+ ++ A+ ++ +D I ++D+ G ++ F + + Sbjct: 20 RLAGSWVLATALPQAE-LLQAVPDGVRR----IDARGIGQLDSAGVLQLLRFASRM--GL 72 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFY----NSFKNLHYHIGKKIVKFINDS 125 K + E +L+ + KP+R + + + + +G+ I++ + Sbjct: 73 KEDAIDFRDEHQ-ALVCTIEELNDERPKPKRDYGFVAALDRLGRTTHGVGQGILELNS-- 129 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 LG + G +F+ L S + M VG+ VP+V+L+S++ GAVIA Sbjct: 130 -----FLGENLVKIGRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFL 182 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 G+ L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAIR Sbjct: 183 GSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIR 242 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 T+GLD + +L+ PR+ ALI +LPLLT +A + + G V DIP ++ +R H T Sbjct: 243 TLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDTI 302 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 L + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ A Sbjct: 303 QLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAA 362 Query: 366 IFYFAIG 372 +++ +G Sbjct: 363 LWFMKMG 369 >gi|146305413|ref|YP_001185878.1| hypothetical protein Pmen_0373 [Pseudomonas mendocina ymp] gi|145573614|gb|ABP83146.1| protein of unknown function DUF140 [Pseudomonas mendocina ymp] Length = 379 Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 119/359 (33%), Positives = 199/359 (55%), Gaps = 9/359 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S + + R G+W S + + V+A+ + + + VDL + +DT GA L++ Sbjct: 13 STDAASGLRIGGDWTLAHYSRL-EPQVLALRERLHGQES-VDLDELAALDTAGAALLVEL 70 Query: 62 M--EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 + E+ + +ST L ++ +Q+ Q+ ++ + + HIG+ + Sbjct: 71 LGSERLRQLAQQDNLSTERRALLLAVA---DAMAGSQQVQQHATPSALREVLGHIGEAVE 127 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 +GL +S +++ L SL + G++ VP+V L++F+ G Sbjct: 128 TTWCHGRELLGFMGLTLSGMLTILLRPARWR--LTSLAAHLEQCGLNAVPIVALLTFLVG 185 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 AV+A GA L+ FGA I++++L++ LRE GVLLTA+++AGR+ SA A+IGSMK NE Sbjct: 186 AVVAFLGATILADFGASIYTVNLVAFSFLREFGVLLTAILMAGRTASAFTAQIGSMKANE 245 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDAIRT+GL + +L+ PR++A++I+LP+LT +A S I+G ++V DIP ++ S Sbjct: 246 EIDAIRTLGLSPIELLVLPRVFAMLIALPILTFIAMLSGIVGGAVVCAVSLDIPLTMYMS 305 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + L + GL+KAP A I ++ EGF V + S+G+ T+ VVQSI +VI Sbjct: 306 ILQDSDLLRHFLVGLLKAPIFAFLIALIGCLEGFKVSGSAQSVGEHTTSAVVQSIFVVI 364 >gi|325923308|ref|ZP_08184981.1| conserved hypothetical integral membrane protein [Xanthomonas gardneri ATCC 19865] gi|325546235|gb|EGD17416.1| conserved hypothetical integral membrane protein [Xanthomonas gardneri ATCC 19865] Length = 370 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 122/367 (33%), Positives = 201/367 (54%), Gaps = 21/367 (5%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 R AG+W A+ ++ A+ I+ +D I ++D+ G ++ F + + Sbjct: 20 RLAGSWVLATALPQAE-LLQAVPDGIRR----IDARGIAQLDSAGVLQLLRFASRM--GL 72 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFY----NSFKNLHYHIGKKIVKFINDS 125 K + E +L+ + KP+R + + + + +G+ I++ + Sbjct: 73 KEDAIDFRDEHQ-ALVCTIEELNDERPKPKRDYGFVAALDRLGRTTHGVGQGILELNS-- 129 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 LG + +F+ L S + M VG+ VP+V+L+S++ GAVIA Sbjct: 130 -----FLGENLVKIARLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFL 182 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 G+ L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAIR Sbjct: 183 GSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIR 242 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 T+GLD + +L+ PR+ ALI +LPLLT +A + + G V DIP ++ +R H T Sbjct: 243 TLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDTI 302 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 L + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ A Sbjct: 303 QLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAA 362 Query: 366 IFYFAIG 372 +++ +G Sbjct: 363 LWFMKMG 369 >gi|103485974|ref|YP_615535.1| hypothetical protein Sala_0481 [Sphingopyxis alaskensis RB2256] gi|98976051|gb|ABF52202.1| protein of unknown function DUF140 [Sphingopyxis alaskensis RB2256] Length = 368 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 110/333 (33%), Positives = 188/333 (56%), Gaps = 9/333 (2%) Query: 40 AIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 A +DLSAI IDT+GA ++ + +I G S ++L ++ + + + + + + Sbjct: 43 ATLDLSAIDRIDTVGAWIVTRTAADHDARIT--GASADAQRLLDALA-SDKSEYRVHRDR 99 Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 R ++ + IG V N+ G +I + + + +++ + Sbjct: 100 RP----AWVRMLEQIGTASVAVWNELLGIVGFFGAMIVAIFNQIRARRRLR--WNAIVTR 153 Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219 VGV +P++ L+SF+ G VIAQQGA QL QFG E+F+I+L+ +RE+G+L+TA+M Sbjct: 154 FQTVGVDALPIIGLMSFLIGIVIAQQGAVQLEQFGLEVFTINLVGRASIRELGLLMTAIM 213 Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279 +AGRSGSA A+IG+MK+ EE+DA+RT+G+ + ++ PR+ A I++PLL A+ AI Sbjct: 214 VAGRSGSAFAAQIGTMKLTEEVDAMRTIGVSPMEAIVLPRVAASTITMPLLGFYASLCAI 273 Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339 G + W DIP + R + + + LIKAP IG+ EG V ++ Sbjct: 274 AGGGLFCWVGLDIPPLTYIQRLREIIPMTDFWIMLIKAPVFGILIGVTGCYEGMQVRQNA 333 Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 +G++ T+ VV +I +VI++D+ FA+F+ ++G Sbjct: 334 EEVGQRTTSAVVAAIFLVIVLDAFFAVFFSSLG 366 >gi|166713439|ref|ZP_02244646.1| ABC transporter permease [Xanthomonas oryzae pv. oryzicola BLS256] Length = 370 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 122/368 (33%), Positives = 199/368 (54%), Gaps = 21/368 (5%) Query: 9 FRFAGNW----KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 R AG+W P+ +E+ V + + +D I ++D+ G ++ F + Sbjct: 19 LRLAGSWVLATALPQ-AELLQTVPDGVRR--------IDARGIQQLDSAGVLQLLRFASR 69 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 +K + E +L+ + KP+R + + + + +G+ + D Sbjct: 70 M--GLKEDAIDFRDEHQ-ALVCTIEELNDERPKPKRDYGFVAALD---RLGRATHRIGQD 123 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG + +F+ L S + M VG+ VP+V+L+S++ GAVIA Sbjct: 124 ILELNSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAF 181 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 G+ L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAI Sbjct: 182 LGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAI 241 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 RT+GLD + +L+ PR+ ALI +LPLLT +A + + G V DIP ++ +R H T Sbjct: 242 RTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHET 301 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ Sbjct: 302 IQLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIA 361 Query: 365 AIFYFAIG 372 A+++ +G Sbjct: 362 ALWFMKMG 369 >gi|21244295|ref|NP_643877.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str. 306] gi|21109945|gb|AAM38413.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str. 306] Length = 370 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 120/364 (32%), Positives = 203/364 (55%), Gaps = 15/364 (4%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 R AG+W A+ ++ A+ ++ +D I ++D+ G ++ ++ G++ Sbjct: 20 RLAGSWVLATALPQAE-LLQAVPDGVRR----IDARGIQQLDSAGVLQLL----RFAGRM 70 Query: 70 KLQGVSTHI-EQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 L+ + ++ +L+ + KP+R + + + + +G+ + D Sbjct: 71 GLKEDAIDFRDEHQALVCTIEELNDERPKPKRDYGFVAALD---RLGRATHRVGQDILEL 127 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + +F+ L S + M VG+ VP+V+L+S++ GAVIA G+ Sbjct: 128 NSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFLGST 185 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAIRT+G Sbjct: 186 ILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIRTLG 245 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD + +L+ PR+ ALI +LPLLT +A + + G V DIP ++ +R H T L Sbjct: 246 LDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDTIQLR 305 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ A+++ Sbjct: 306 HFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWF 365 Query: 369 FAIG 372 +G Sbjct: 366 MKMG 369 >gi|294624127|ref|ZP_06702865.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294663966|ref|ZP_06729386.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292601572|gb|EFF45571.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292606261|gb|EFF49492.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 370 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 119/364 (32%), Positives = 204/364 (56%), Gaps = 15/364 (4%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 R AG+W A+ ++ A+ + ++ +D I ++D+ G ++ ++ G++ Sbjct: 20 RLAGSWVLATALPQAE-LLQAVPEGVRR----IDARGIQQLDSAGVLQLL----RFAGRM 70 Query: 70 KLQGVSTHI-EQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 L+ + ++ +L+ + KP+R + + + + +G+ + D Sbjct: 71 GLKEDAIDFRDEHQALVCTIEELNDERPKPKRDYGFVAALD---RLGRATHRVGQDILEL 127 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + +F+ L S + M VG+ VP+V+L+S++ GAVIA G+ Sbjct: 128 NSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFLGST 185 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAIRT+G Sbjct: 186 ILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIRTLG 245 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD + +L+ PR+ AL+ +LPLLT +A + + G V DIP ++ +R H T L Sbjct: 246 LDPIDLLVIPRLLALVFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDTIQLR 305 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ A+++ Sbjct: 306 HFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWF 365 Query: 369 FAIG 372 +G Sbjct: 366 MKMG 369 >gi|325928564|ref|ZP_08189752.1| putative integral membrane protein [Xanthomonas perforans 91-118] gi|325541103|gb|EGD12657.1| putative integral membrane protein [Xanthomonas perforans 91-118] Length = 370 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 120/364 (32%), Positives = 203/364 (55%), Gaps = 15/364 (4%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 R AG+W A+ ++ A+ ++ +D I ++D+ G ++ ++ G++ Sbjct: 20 RLAGSWVLATALPQAE-LLQAVPDGVRR----IDARGIQQLDSAGVLQLL----RFAGRM 70 Query: 70 KLQGVSTHI-EQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 L+ + ++ +L+ + KP+R + + + + +G+ + D Sbjct: 71 GLKEDAIDFRDEHQALVCTIEELNDERPKPKRDYGFVAALD---RLGRATHRVGQDILEL 127 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + +F+ L S + M VG+ VP+V+L+S++ GAVIA G+ Sbjct: 128 NSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFLGST 185 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAIRT+G Sbjct: 186 ILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIRTLG 245 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD + +L+ PR+ ALI +LPLLT +A + + G V DIP ++ +R H T L Sbjct: 246 LDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHETIQLR 305 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ A+++ Sbjct: 306 HFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWF 365 Query: 369 FAIG 372 +G Sbjct: 366 MKMG 369 >gi|84622391|ref|YP_449763.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188578633|ref|YP_001915562.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae PXO99A] gi|84366331|dbj|BAE67489.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188523085|gb|ACD61030.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae PXO99A] Length = 370 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 122/368 (33%), Positives = 199/368 (54%), Gaps = 21/368 (5%) Query: 9 FRFAGNW----KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 R AG+W P+ +E+ V + + +D I ++D+ G ++ F + Sbjct: 19 LRLAGSWVLATALPQ-AELLQTVPDGVRR--------IDARGIQQLDSAGVLQLLRFASR 69 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 +K + E +L+ + KP+R + + + + +G+ + D Sbjct: 70 I--GLKEDAIDFRDEHQ-ALVCTIEELNDERPKPKRDYGFVAALD---RLGRATHRIGQD 123 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG + +F+ L S + M VG+ VP+V+L+S++ GAVIA Sbjct: 124 ILELNSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAF 181 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 G+ L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAI Sbjct: 182 LGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAI 241 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 RT+GLD + +L+ PR+ ALI +LPLLT +A + + G V DIP ++ +R H T Sbjct: 242 RTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHET 301 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ Sbjct: 302 IQLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIA 361 Query: 365 AIFYFAIG 372 A+++ +G Sbjct: 362 ALWFMKMG 369 >gi|58580429|ref|YP_199445.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae KACC10331] gi|58425023|gb|AAW74060.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae KACC10331] Length = 398 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 122/368 (33%), Positives = 199/368 (54%), Gaps = 21/368 (5%) Query: 9 FRFAGNW----KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 R AG+W P+ +E+ V + + +D I ++D+ G ++ F + Sbjct: 47 LRLAGSWVLATALPQ-AELLQTVPDGVRR--------IDARGIQQLDSAGVLQLLRFASR 97 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 +K + E +L+ + KP+R + + + + +G+ + D Sbjct: 98 I--GLKEDAIDFRDEHQ-ALVCTIEELNDERPKPKRDYGFVAALD---RLGRATHRIGQD 151 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG + +F+ L S + M VG+ VP+V+L+S++ GAVIA Sbjct: 152 ILELNSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAF 209 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 G+ L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAI Sbjct: 210 LGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAI 269 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 RT+GLD + +L+ PR+ ALI +LPLLT +A + + G V DIP ++ +R H T Sbjct: 270 RTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHET 329 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ Sbjct: 330 IQLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIA 389 Query: 365 AIFYFAIG 372 A+++ +G Sbjct: 390 ALWFMKMG 397 >gi|289662615|ref|ZP_06484196.1| ABC transporter permease [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289668440|ref|ZP_06489515.1| ABC transporter permease [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 370 Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 122/368 (33%), Positives = 199/368 (54%), Gaps = 21/368 (5%) Query: 9 FRFAGNW----KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 R AG+W P+ +E+ V + + +D I ++D+ G ++ F + Sbjct: 19 LRLAGSWVLATALPQ-AELLQTVPDGVRR--------IDARGIQQLDSAGVLQLLRFASR 69 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 +K + E +L+ + KP+R + + + + +G+ + D Sbjct: 70 M--GLKEDAIDFRDEHQ-ALVCTIEELNDERPKPKRDYGFVAALD---RLGRATHRVGQD 123 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG + +F+ L S + M VG+ VP+V+L+S++ GAVIA Sbjct: 124 ILELNSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAF 181 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 G+ L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAI Sbjct: 182 LGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAI 241 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 RT+GLD + +L+ PR+ ALI +LPLLT +A + + G V DIP ++ +R H T Sbjct: 242 RTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDT 301 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ Sbjct: 302 IQLRHFLVGLSKAPLFALVIGLIGCLEGLKVTGTAQSVGERTTSSVVQTISLVIILDAIA 361 Query: 365 AIFYFAIG 372 A+++ +G Sbjct: 362 ALWFMKMG 369 >gi|330806719|ref|YP_004351181.1| Putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327374827|gb|AEA66177.1| Putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 382 Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 118/342 (34%), Positives = 186/342 (54%), Gaps = 19/342 (5%) Query: 37 SDSAIVDLSAITEIDTIGAELIMYFM-------EKYHGKIKLQGVSTHIEQLF--SLISF 87 ++ ++DL+ + +DT GA L++ + H L + Q SL F Sbjct: 47 DENTLIDLNGLGALDTAGASLLVELLGSERLGKTTEHPDCSLPAAERALLQTVYCSLTDF 106 Query: 88 THRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSY 147 + ++PQ L IG+ + K D+ +GL++ Sbjct: 107 C----VPVKEPQ----VGVLTQLLTRIGRAVEKVWQDTLQLLGFVGLILETLARNLLRPR 158 Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 +++ + ++ + G+ P+V L++F+ GAV+A GA L+ FGA IF++DL++ Sbjct: 159 RWR--MTPMVVHIEQTGLDAAPIVALLTFLVGAVVAFLGATVLADFGASIFTVDLVAFSF 216 Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267 LRE GVLLTA+++AGR+ SA A+IGSMK NEEIDAIRT+GLD V +L+ PR+ AL+++L Sbjct: 217 LREFGVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRTLGLDPVELLVIPRVLALLVAL 276 Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327 P+LT LA S IIG +V I A+F + S + + G++KAP A I V Sbjct: 277 PMLTFLAMLSGIIGGGVVCALSLGISPAMFLTLLQSDIGVQHFLVGMVKAPIFAFLIAAV 336 Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 EGF V + S+G T+ VVQSI +VI++D++ A+F+ Sbjct: 337 GCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVLDAVAALFFM 378 >gi|114764121|ref|ZP_01443360.1| ABC transporter, inner membrane subunit [Pelagibaca bermudensis HTCC2601] gi|114543479|gb|EAU46494.1| ABC transporter, inner membrane subunit [Roseovarius sp. HTCC2601] Length = 377 Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 121/338 (35%), Positives = 193/338 (57%), Gaps = 10/338 (2%) Query: 39 SAIVDLSAITEIDTIGAELIMYFMEKYH---GKIKLQGVSTHIEQLFSLISFTHRKKIKN 95 S +VDL+ + IDT GA L++ + G L+ VS L + ++ + Sbjct: 47 SLVVDLAGVERIDTAGAWLLVDLEARAQAAGGSFGLRNVSDTTALLLDNV-----RQARP 101 Query: 96 QKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLS 155 ++ R + L IG+ +V + LGL ++ G +F+ L + Sbjct: 102 EREDRPAAARGIQALLEQIGRAVVGGLRYFADLTGFLGLFLARLGRVLRHPSQFR--LTA 159 Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+ VG+ VP+V L+SF+ G V+A QG+ QL QFGAE+F +DL++I LRE+G+LL Sbjct: 160 LVAHCEDVGLRAVPIVALMSFLIGVVLAFQGSEQLRQFGAEVFVVDLIAISVLRELGILL 219 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA+++AGR+ SA A IGSMK+ EEIDA+RT+GLD +L PRI AL++ LP+L ++A+ Sbjct: 220 TAIIVAGRTASAFTAAIGSMKMREEIDAMRTLGLDPGVMLFVPRILALLLMLPILGLIAD 279 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 F + G +++ W I ++F +R + ++ GL+KAP A IG+V G V Sbjct: 280 FMGLFGGALMAWLELGISPSMFVTRLIEGTGVGHLLVGLVKAPAFALIIGVVGCHAGMQV 339 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 ++ SLG+ + VV +I VI+ D+LF++F+ +GI Sbjct: 340 KGNAESLGRMTSGAVVAAIFAVILADALFSVFFAKVGI 377 >gi|21230110|ref|NP_636027.1| ABC transporter permease [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769899|ref|YP_244661.1| ABC transporter permease [Xanthomonas campestris pv. campestris str. 8004] gi|21111638|gb|AAM39951.1| ABC transporter permease [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575231|gb|AAY50641.1| ABC transporter permease [Xanthomonas campestris pv. campestris str. 8004] Length = 370 Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 121/367 (32%), Positives = 201/367 (54%), Gaps = 21/367 (5%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 R AG+W A+ ++ A+ ++ +D I ++D+ G ++ F + + Sbjct: 20 RLAGSWVLATALPQAE-LLQAVPDGVRR----IDARGIGQLDSAGVLQLLRFASRM--GL 72 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFY----NSFKNLHYHIGKKIVKFINDS 125 K + E +L+ + KP+R + + + + +G+ I++ + Sbjct: 73 KEDAIDFRDEHQ-ALVCTIEELNDERPKPKRDYGFVAALDRLGRTTHGVGQGILELNS-- 129 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 LG + +F+ L S + M VG+ VP+V+L+S++ GAVIA Sbjct: 130 -----FLGENLVKIARLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFL 182 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 G+ L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAIR Sbjct: 183 GSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIR 242 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 T+GLD + +L+ PR+ ALI +LPLLT +A + + G V DIP ++ +R H T Sbjct: 243 TLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDTI 302 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 L + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ A Sbjct: 303 QLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAA 362 Query: 366 IFYFAIG 372 +++ +G Sbjct: 363 LWFMKMG 369 >gi|78049251|ref|YP_365426.1| ABC transporter permease [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78037681|emb|CAJ25426.1| ABC transporter permease [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 409 Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 114/332 (34%), Positives = 190/332 (57%), Gaps = 10/332 (3%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHI-EQLFSLISFTHRKKIKNQKPQR 100 +D I ++D+ G ++ ++ G++ L+ + ++ +L+ + KP+R Sbjct: 86 IDARGIQQLDSAGVLQLL----RFAGRMGLKEDAIDFRDEHQALVCTIEELNDERPKPKR 141 Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 + + + + +G+ + D LG + +F+ L S + M Sbjct: 142 DYGFVAALD---RLGRATHRVGQDILELNSFLGENLVKIMRLIHEPRRFR--LTSTVHHM 196 Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 VG+ VP+V+L+S++ GAVIA G+ L FGAEI+ ++L+SI LRE VLLTA+++ Sbjct: 197 EQVGLDAVPLVVLLSYLVGAVIAFLGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVL 256 Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280 AGR+ SA A+IG+MK EE+DAIRT+GLD + +L+ PR+ ALI +LPLLT +A + + Sbjct: 257 AGRTASAFTAQIGAMKSREEVDAIRTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLA 316 Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 G V DIP ++ +R H T L + GL KAP A IG++ EG V + Sbjct: 317 GGVTVGAFDLDIPPQMYLARMHETIQLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQ 376 Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 S+G++ T+ VVQ+IS+VII+D++ A+++ +G Sbjct: 377 SVGERTTSSVVQTISLVIILDAIAALWFMKMG 408 >gi|146277759|ref|YP_001167918.1| hypothetical protein Rsph17025_1720 [Rhodobacter sphaeroides ATCC 17025] gi|145556000|gb|ABP70613.1| protein of unknown function DUF140 [Rhodobacter sphaeroides ATCC 17025] Length = 366 Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 107/335 (31%), Positives = 189/335 (56%), Gaps = 9/335 (2%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYHG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 +D+ A+ +DT GA I+ ++ ++ +S L + ++ + +P Sbjct: 38 LDMGAVEALDTAGAWAILSAQKRAEAGGRPFEIVNLSEAHRHLLATVA----DAMPEPEP 93 Query: 99 QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158 +R + +G+++ + S G V+++ G + + L L+ Sbjct: 94 RRRTIPGRPGDGLAQLGQEVAGGLRGSLDSMAFFGQVVAHLGGLLIHPRRLR--LTPLVH 151 Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 M G + VP+V L+ F+ G V+A QG+ QL FGAE++ +DL++I LRE+G+LLTA+ Sbjct: 152 HMQEAGWNAVPIVTLMGFLIGIVLAFQGSTQLKAFGAEVYVVDLVAISILRELGILLTAI 211 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++AGRSGSA A IGSMK+ EEIDA+R +GLD + L+ PR+ AL+I LP+L +A+ + Sbjct: 212 IVAGRSGSAFTAAIGSMKMREEIDAMRVLGLDPIDRLVLPRLIALVILLPVLGFIASMAG 271 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 ++G +++ W I +F ++ + + + GL+KAPF A I ++ +G V + Sbjct: 272 LVGGALMAWIDLGITPGMFRTQLLADTDVNHAIIGLVKAPFFAVIIAVIGCHQGMQVSGN 331 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + SLG + VVQ+I +VI++D+LF++F+ G+ Sbjct: 332 AESLGSHTSRSVVQAIFLVIVVDALFSVFFAVWGL 366 >gi|28198464|ref|NP_778778.1| ABC transporter permease [Xylella fastidiosa Temecula1] gi|28056548|gb|AAO28427.1| ABC transporter permease [Xylella fastidiosa Temecula1] Length = 372 Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 125/350 (35%), Positives = 201/350 (57%), Gaps = 14/350 (4%) Query: 24 ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFS 83 A +++ + + SIQ ++ I ++D+ GA ++ F + +K + + E+ Sbjct: 35 ASELLQSYSNSIQH----INARNIDQLDSAGALQLLRFTTRT--GLKNEAIEFR-EEHRP 87 Query: 84 LISFTHRKKIKNQKPQRSF-FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEF 142 LIS ++ KP+R + F + + L + K + I D CS LG + + Sbjct: 88 LISTIEILDDEHPKPERDYGFLAALERLGIAV-VKTRRNIIDVCS---FLGENLVKIAQL 143 Query: 143 CASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDL 202 +F+ + S + M VG+ VP+V+++S++ GAVIA G+ L FGAEIF ++L Sbjct: 144 AREPRRFR--ITSTVHHMEQVGLDAVPLVVVLSYLVGAVIAFLGSTILRNFGAEIFVVEL 201 Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 ++I LRE VLLTA+++AGR+ SA A+IG+MK EEIDAI+T+GLD + +L+ PR+ A Sbjct: 202 VNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEIDAIQTLGLDPIDLLVIPRLIA 261 Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322 L++ LPLLT +A + + G V IP ++ SR H T L + G+ KAP A Sbjct: 262 LLVMLPLLTFIAMIAGLAGGITVGAFDLGIPPQMYLSRMHETMQLRHFIIGMSKAPLFAL 321 Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 IG++ EG V + S+GK T+ VVQ+IS+VIIID+L A+++ +G Sbjct: 322 IIGLIGCLEGLKVTGTAQSVGKHTTSSVVQTISLVIIIDALAALWFMRMG 371 >gi|126462257|ref|YP_001043371.1| hypothetical protein Rsph17029_1489 [Rhodobacter sphaeroides ATCC 17029] gi|126103921|gb|ABN76599.1| protein of unknown function DUF140 [Rhodobacter sphaeroides ATCC 17029] Length = 366 Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 108/335 (32%), Positives = 190/335 (56%), Gaps = 9/335 (2%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 +D++A+ +DT GA I+ ++ +++ +S L ++ + + ++ Sbjct: 38 IDMAAVEALDTAGAWAILQAQKRAEAAGQALEIVNLSESHRHLLETVAAAMPEPERRRRT 97 Query: 99 QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158 + NL G+++ + + S + G V+++ G + K L L+ Sbjct: 98 IPGRPDDGLANL----GQEVAQGLRGSLTSVGFFGEVVAHLGALVLHPTRLK--LTPLVH 151 Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 M G + VP+V L+ F+ G V+A QG+ QL FGAE++ +DL++I LRE+G+LLTA+ Sbjct: 152 HMQEAGWNAVPIVSLMGFLIGIVLAFQGSTQLKSFGAEVYVVDLVAISILRELGILLTAI 211 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++AGRS SA A IGSMK+ EEIDA+R +GLD + L+ PR+ AL+I LP L +A+ + Sbjct: 212 IVAGRSASAFTAAIGSMKMREEIDAMRVLGLDPIDRLVLPRLIALVILLPALGFIASLAG 271 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 ++G ++ W I +F ++ + +++ GL+KAPF A I ++ +G V + Sbjct: 272 LVGGGLMAWIDLGITPGMFRTQLLADTDVSHAIIGLVKAPFFAVIIAVIGCHQGMQVSGN 331 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + SLG + VVQ+I +VI++D+LF+IF+ G+ Sbjct: 332 AESLGSHTSRSVVQAIFLVIVVDALFSIFFAVWGL 366 >gi|182681137|ref|YP_001829297.1| hypothetical protein XfasM23_0579 [Xylella fastidiosa M23] gi|182631247|gb|ACB92023.1| protein of unknown function DUF140 [Xylella fastidiosa M23] gi|307579585|gb|ADN63554.1| ABC transporter permease [Xylella fastidiosa subsp. fastidiosa GB514] Length = 396 Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 125/350 (35%), Positives = 201/350 (57%), Gaps = 14/350 (4%) Query: 24 ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFS 83 A +++ + + SIQ ++ I ++D+ GA ++ F + +K + + E+ Sbjct: 59 ASELLQSYSNSIQH----INARNIDQLDSAGALQLLRFTTRT--GLKNEAIEFR-EEHRP 111 Query: 84 LISFTHRKKIKNQKPQRSF-FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEF 142 LIS ++ KP+R + F + + L + K + I D CS LG + + Sbjct: 112 LISTIEILDDEHPKPERDYGFLAALERLGIAV-VKTRRNIIDVCS---FLGENLVKIAQL 167 Query: 143 CASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDL 202 +F+ + S + M VG+ VP+V+++S++ GAVIA G+ L FGAEIF ++L Sbjct: 168 AREPRRFR--ITSTVHHMEQVGLDAVPLVVVLSYLVGAVIAFLGSTILRNFGAEIFVVEL 225 Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 ++I LRE VLLTA+++AGR+ SA A+IG+MK EEIDAI+T+GLD + +L+ PR+ A Sbjct: 226 VNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEIDAIQTLGLDPIDLLVIPRLIA 285 Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322 L++ LPLLT +A + + G V IP ++ SR H T L + G+ KAP A Sbjct: 286 LLVMLPLLTFIAMIAGLAGGITVGAFDLGIPPQMYLSRMHETMQLRHFIIGMSKAPLFAL 345 Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 IG++ EG V + S+GK T+ VVQ+IS+VIIID+L A+++ +G Sbjct: 346 IIGLIGCLEGLKVTGTAQSVGKHTTSSVVQTISLVIIIDALAALWFMRMG 395 >gi|221639257|ref|YP_002525519.1| ABC transporter inner membrane subunit [Rhodobacter sphaeroides KD131] gi|221160038|gb|ACM01018.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides KD131] Length = 356 Score = 192 bits (488), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 108/335 (32%), Positives = 190/335 (56%), Gaps = 9/335 (2%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 +D++A+ +DT GA I+ ++ +++ +S L ++ + + ++ Sbjct: 28 IDMAAVEALDTAGAWAILQAQKRAEAAGQALEIVNLSESHRHLLETVAAAMPEPERRRRT 87 Query: 99 QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158 + NL G+++ + + S + G V+++ G + K L L+ Sbjct: 88 IPGRPDDGLANL----GQEVAQGLRGSLTSVGFFGEVVAHLGALVLHPTRLK--LTPLVH 141 Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 M G + VP+V L+ F+ G V+A QG+ QL FGAE++ +DL++I LRE+G+LLTA+ Sbjct: 142 HMQEAGWNAVPIVSLMGFLIGIVLAFQGSTQLKSFGAEVYVVDLVAISILRELGILLTAI 201 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++AGRS SA A IGSMK+ EEIDA+R +GLD + L+ PR+ AL+I LP L +A+ + Sbjct: 202 IVAGRSASAFTAAIGSMKMREEIDAMRVLGLDPIDRLVLPRLIALVILLPALGFIASLAG 261 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 ++G ++ W I +F ++ + +++ GL+KAPF A I ++ +G V + Sbjct: 262 LVGGGLMAWIDLGITPGMFRTQLLADTDVSHAIIGLVKAPFFAVIIAVIGCHQGMQVSGN 321 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + SLG + VVQ+I +VI++D+LF+IF+ G+ Sbjct: 322 AESLGSHTSRSVVQAIFLVIVVDALFSIFFAVWGL 356 >gi|114570554|ref|YP_757234.1| hypothetical protein Mmar10_2004 [Maricaulis maris MCS10] gi|114341016|gb|ABI66296.1| protein of unknown function DUF140 [Maricaulis maris MCS10] Length = 384 Score = 192 bits (488), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 123/376 (32%), Positives = 195/376 (51%), Gaps = 13/376 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 E T+ G+W I D+ + A+ S S +VD+S + +DT GA Y Sbjct: 18 EEGERTILEPHGDWVIDTIGR-HDNAIRAVEASADPCSIVVDVSHLGRVDTAGA----YL 72 Query: 62 MEKYHGKIKLQGVSTH-IEQLFSLISFTHRKKIKNQ--KPQRSFFYNSFKNLHYHIGKKI 118 + + K H + Q ++ +++ Q P + K L +G I Sbjct: 73 LGRATRKCPTPDADFHFVGQHRTVRRLIEEVRMRTQVCGPDEVPTFGFIKAL-ARLGAGI 131 Query: 119 VKFINDSCSQAHILGLVISNTGEFC-ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 ++ G ++ TG C ++F+ L + M VGV+ +P+V ++F Sbjct: 132 EVAYQEAVDTFAFFGKTLT-TGLSCFIQPWRFR--LTPTVWAMEEVGVNALPIVATLTFF 188 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 GAV+A GA L FGA +F++DL+ + LRE GVL+TA+M+A RS SA A IG+MK+ Sbjct: 189 IGAVVAYMGATLLQSFGASVFTVDLVGLAVLREFGVLITAIMLAARSDSAFTASIGAMKM 248 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 +EIDA+R +GLD L+ PR+ A ++ PLLT A + I G +V W DI A+F Sbjct: 249 QQEIDAMRVLGLDPYEALVLPRVVACVLMAPLLTFGAMVAGIFGGMLVAWTAQDISPALF 308 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 F+R HS +++ + G+ KAP + I+ ++G V SLG++VT VVQSI + Sbjct: 309 FTRLHSEIDISHFWVGMSKAPVFGMVVAIIGCRQGMQVQGDVESLGRRVTASVVQSIFAI 368 Query: 358 IIIDSLFAIFYFAIGI 373 I++++LFA+ Y + I Sbjct: 369 IVLEALFAMMYLELEI 384 >gi|330501346|ref|YP_004378215.1| hypothetical protein MDS_0432 [Pseudomonas mendocina NK-01] gi|328915632|gb|AEB56463.1| hypothetical protein MDS_0432 [Pseudomonas mendocina NK-01] Length = 381 Score = 192 bits (487), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 120/367 (32%), Positives = 200/367 (54%), Gaps = 25/367 (6%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S + + R G+W S++ + V+A+ + + + VDL + +DT GA L+ Sbjct: 15 STDAASGLRLGGDWTLAHYSQL-EPQVLALRERLHGKES-VDLGDLAALDTAGAALL--- 69 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKK---------IKNQKPQRSFFYNS-FKNLH 111 ++L G S + QL R++ + P ++ S + + Sbjct: 70 -------VELFG-SERLRQLIQQAELDERRRALLLTVADAMAGSAPAQAASEPSVLREVL 121 Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171 HIG+ + + + +GL +++ +++ L SL + G++ VP+V Sbjct: 122 GHIGEVVEGMWHQGRALLGFMGLTLTSMLAILVRPMRWR--LTSLAAHLEQCGLNAVPIV 179 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 L++F+ GAV+A GA L+ FGA I++++L++ LRE GVLLTA+++AGR+ SA A+ Sbjct: 180 ALLTFLVGAVVAFLGATILADFGATIYTVNLVAFSFLREFGVLLTAILMAGRTASAFTAQ 239 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 IGSMK NEEIDAIRT+GL + +L+ PR++A++I+LP+LT +A S I+G +V D Sbjct: 240 IGSMKANEEIDAIRTLGLSPIELLVLPRVFAMLIALPILTFIAMLSGIVGGGLVCAVSLD 299 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 IP ++ S + L + GL+KAP A I ++ EGF V + S+G+ T+ VV Sbjct: 300 IPVTMYLSILQDSDLLRHFLVGLLKAPIFAFLIALIGCLEGFKVSGSAQSVGEHTTSAVV 359 Query: 352 QSISIVI 358 QSI +VI Sbjct: 360 QSIFVVI 366 >gi|254292866|ref|YP_003058889.1| hypothetical protein Hbal_0490 [Hirschia baltica ATCC 49814] gi|254041397|gb|ACT58192.1| protein of unknown function DUF140 [Hirschia baltica ATCC 49814] Length = 380 Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 112/373 (30%), Positives = 199/373 (53%), Gaps = 12/373 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G V G W + + I + +K + D ++ D+S + + DT GA ++ + + Sbjct: 16 GDPVMVLEGAWTAFTVGAIDKPLRQLTSKDVSKDVSL-DVSQLEDFDTAGAYVVDRTLRQ 74 Query: 65 YHGK----IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 K+ G + + L + ++ + +K K + + F L +G V Sbjct: 75 LGAPSGSLAKIVGDTHSVISLLTAVNAAKPEPVKKAKDR-----HGFTQLLDRVGHGTVD 129 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + + +G + + K + S++ M G++ +P+V ++SF G Sbjct: 130 ALKEGWGILEFIGEAFTTVFFLLLNPKKIR--WTSVVAIMEEAGLNALPIVSMLSFFIGI 187 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 VIA G L FGA++F+++++ L LRE G++LTA+++AGR+ S+ AEIG+MK+ EE Sbjct: 188 VIAFLGVNLLQSFGAQVFTVEMVGFLMLREFGLVLTAILLAGRTDSSFTAEIGAMKMREE 247 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +DA+R MGL+ + +L++PR+ AL++ P L+ A S ++G +V+W DI A+F R Sbjct: 248 VDAMRVMGLNPMEVLVAPRLIALLVMTPFLSFFAMISGLVGGLLVMWGVMDISPAMFIQR 307 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 T N + G++KAP A I +V ++G V SLG++ T+ VVQ+I +VI+I Sbjct: 308 IQDTVPGQNFWVGIVKAPVFATVIALVGCRQGLLVSGDVQSLGQRTTSSVVQAIFLVIVI 367 Query: 361 DSLFAIFYFAIGI 373 D++FAI Y +G+ Sbjct: 368 DAIFAILYMEMGL 380 >gi|77463402|ref|YP_352906.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gi|77387820|gb|ABA79005.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] Length = 366 Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 107/335 (31%), Positives = 190/335 (56%), Gaps = 9/335 (2%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 +D++A+ +DT GA ++ ++ +++ +S L ++ + + ++ Sbjct: 38 IDMAAVEALDTAGAWALLQAQKRAEAAGQALEIVNLSESHRHLLETVAAAMPEPERRRRT 97 Query: 99 QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158 + NL G+++ + + S + G V+++ G + K L L+ Sbjct: 98 IPGRPDDGLANL----GQEVAQGLRGSLTSVGFFGEVVTHLGALVLHPTRLK--LTPLVH 151 Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 M G + VP+V L+ F+ G V+A QG+ QL FGAE++ +DL++I LRE+G+LLTA+ Sbjct: 152 HMQEAGWNAVPIVSLMGFLIGIVLAFQGSTQLKSFGAEVYVVDLVAISILRELGILLTAI 211 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++AGRS SA A IGSMK+ EEIDA+R +GLD + L+ PR+ AL+I LP L +A+ + Sbjct: 212 IVAGRSASAFTAAIGSMKMREEIDAMRVLGLDPIDRLVLPRLIALVILLPALGFIASLAG 271 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 ++G ++ W I +F ++ + +++ GL+KAPF A I ++ +G V + Sbjct: 272 LVGGGLMAWIDLGITPGMFRTQLLADTDVSHAIIGLVKAPFFAVIIAVIGCHQGMQVSGN 331 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + SLG + VVQ+I +VI++D+LF+IF+ G+ Sbjct: 332 AESLGSHTSRSVVQAIFLVIVVDALFSIFFAVWGL 366 >gi|325915744|ref|ZP_08178046.1| hypothetical integral membrane protein [Xanthomonas vesicatoria ATCC 35937] gi|325538008|gb|EGD09702.1| hypothetical integral membrane protein [Xanthomonas vesicatoria ATCC 35937] Length = 370 Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 119/368 (32%), Positives = 205/368 (55%), Gaps = 23/368 (6%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 R +G+W A+ ++ A+ ++ +D I ++D+ G ++ ++ G++ Sbjct: 20 RLSGSWVLATALPQAE-LLQAVPDGVRR----IDARGIGQLDSAGVLQLL----RFAGRM 70 Query: 70 KLQGVSTHI-EQLFSLISFTHRKKIKNQKPQRSFFY----NSFKNLHYHIGKKIVKFIND 124 L+ + ++ +L+ + KP+R + + + + +G+ I++ + Sbjct: 71 GLKEDAIDFRDEHQALVCTIEELNDERPKPKRDYGFVAALDRLGRTTHGVGQGILELNS- 129 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG + +F+ L S + M VG+ VP+V+L+S++ GAVIA Sbjct: 130 ------FLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAF 181 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 G+ L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAI Sbjct: 182 LGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAI 241 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 RT+GLD + +L+ PR+ ALI +LPLLT +A + + G V DIP ++ +R H T Sbjct: 242 RTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDT 301 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ Sbjct: 302 IQLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIA 361 Query: 365 AIFYFAIG 372 A+++ +G Sbjct: 362 ALWFMKMG 369 >gi|319788025|ref|YP_004147500.1| hypothetical protein Psesu_2437 [Pseudoxanthomonas suwonensis 11-1] gi|317466537|gb|ADV28269.1| protein of unknown function DUF140 [Pseudoxanthomonas suwonensis 11-1] Length = 371 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 127/371 (34%), Positives = 199/371 (53%), Gaps = 29/371 (7%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 R G+W E+A A + I D A VD S + ID+ G M + ++ + Sbjct: 21 RLQGDWILDHALEMA-----ARLREIPGDVASVDASGVGRIDSAG----MMQLARFARRR 71 Query: 70 KLQGVSTHI-EQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLH------YHIGKKIVKFI 122 +L + H E L+ + + + +P+R Y L + +G+ IV+ Sbjct: 72 ELADDALHFSESHLPLVQLI--EDVPDDRPRRKRDYGFAAALERLGRATHTVGRNIVE-- 127 Query: 123 NDSCSQAHILGLVISN-TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 +LG N + L + + M VG+ +P+V L+S++ GAV Sbjct: 128 --------LLGFTGENLVKLLRLLRQPRRFRLTATVSHMEQVGLDALPLVALLSYLVGAV 179 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IA G+ L+ FGAEIF ++L+SI LRE VLLTA+++AGR+ SA A+IGSMK EEI Sbjct: 180 IAFLGSTILADFGAEIFVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGSMKAREEI 239 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DAIRT+GLD + +L+ PR+ AL++ LPLLT +A + + G V +IP ++ +R Sbjct: 240 DAIRTLGLDPIELLVIPRLVALLVMLPLLTFVAMMAGLAGGVTVGAFDLEIPPQMYLARM 299 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 T + + G+ KAP A IG++ EG V + S+G++ T+ VVQ+IS+VIIID Sbjct: 300 EETMQVRHFLVGMSKAPVFAMVIGLIGCLEGMRVQGSAQSVGERTTSSVVQTISLVIIID 359 Query: 362 SLFAIFYFAIG 372 +L A+++ +G Sbjct: 360 ALAALWFMNMG 370 >gi|71274907|ref|ZP_00651195.1| Protein of unknown function DUF140 [Xylella fastidiosa Dixon] gi|71898795|ref|ZP_00680963.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1] gi|71901849|ref|ZP_00683912.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1] gi|170729829|ref|YP_001775262.1| ABC transporter permease [Xylella fastidiosa M12] gi|71164639|gb|EAO14353.1| Protein of unknown function DUF140 [Xylella fastidiosa Dixon] gi|71728377|gb|EAO30545.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1] gi|71731381|gb|EAO33444.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1] gi|167964622|gb|ACA11632.1| ABC transporter permease [Xylella fastidiosa M12] Length = 372 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 126/363 (34%), Positives = 205/363 (56%), Gaps = 15/363 (4%) Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK 70 +G+W + A +++ + + SIQ ++ I ++D+ GA ++ F + +K Sbjct: 23 LSGSWVLANVLT-ASELLQSYSNSIQH----INARNIDQLDSAGALQLLRFATRT--GLK 75 Query: 71 LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF-FYNSFKNLHYHIGKKIVKFINDSCSQA 129 + + E+ LIS ++ KP+R + F + + L + K + I D CS Sbjct: 76 NEAIEFR-EEHRPLISTIEILDDEHPKPERDYGFLAALERLGIAV-VKTRRNIIDVCS-- 131 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 LG + + +F+ + S + M VG+ VP+V+++S++ GAVIA G+ Sbjct: 132 -FLGENLVKIAQLAREPRRFR--ITSTVHHMEQVGLDAVPLVVVLSYLVGAVIAFLGSTI 188 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L FGAEIF ++L++I LRE VLLTA+++AGR+ SA A+IG+MK EEIDAI+T+GL Sbjct: 189 LRNFGAEIFVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEIDAIQTLGL 248 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 D + +L+ PR+ AL++ LPLLT +A + + G V IP ++ SR H T + Sbjct: 249 DPIDLLVIPRLIALLVMLPLLTFIAMIAGLAGGITVGAFDLGIPPQMYLSRMHETMQFRH 308 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 G+ KAP A IG++ EG V + S+GK T+ VVQ+IS+VIIID+L A+++ Sbjct: 309 FIIGMSKAPLFALIIGLIGCLEGLKVTGTAQSVGKHTTSSVVQTISLVIIIDALAALWFM 368 Query: 370 AIG 372 +G Sbjct: 369 RMG 371 >gi|114798707|ref|YP_761599.1| hypothetical protein HNE_2921 [Hyphomonas neptunium ATCC 15444] gi|114738881|gb|ABI77006.1| putative membrane protein [Hyphomonas neptunium ATCC 15444] Length = 375 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 113/372 (30%), Positives = 197/372 (52%), Gaps = 10/372 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S+ G V R G+W I+++ D + A+++S+ +D+S + +DT GA LI Sbjct: 14 SDEG-NVLRLGGDWTVATINQL-DAQLRAVSQSV---PICLDVSGLGRLDTSGAYLIDRT 68 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + + V H SL+ H P ++ + GK V F Sbjct: 69 WRENGAAWPPRIVGDHASAA-SLLEQVHAHAEPVPPPAKA--DAGLLAMLERTGKGSVDF 125 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 ++ + LG + +K + S++ M G++ +P++ +SF G V Sbjct: 126 YKETTASLAFLGETLVTIVRLLVQPWKLR--WTSIVAVMEEAGLNAMPIIAFLSFFVGMV 183 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A GA L F EI++I+L+ LRE GV+LT +++AGR+ S+ A+IG+MK+ +E+ Sbjct: 184 VAFIGATTLKDFDLEIYTIELIGFSMLREFGVVLTGIVLAGRTNSSFTAQIGTMKMRQEV 243 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA++T+GL + +L++PR+ A+++ P+LT +A + + G + V W DI AVF R Sbjct: 244 DAMQTLGLKPMDVLVAPRVLAMLVMTPILTFVATLAGVAGGATVAWAALDINPAVFVERM 303 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 ++ + + G+ K+P + ++A ++G VG SLGK TT VVQ+I +I+ID Sbjct: 304 RNSVPIDQFWIGMSKSPVFGLVVALIACRQGLQVGGSVQSLGKATTTSVVQAIFAIIVID 363 Query: 362 SLFAIFYFAIGI 373 ++FAIFY +G+ Sbjct: 364 AIFAIFYMELGL 375 >gi|15837904|ref|NP_298592.1| hypothetical protein XF1303 [Xylella fastidiosa 9a5c] gi|9106294|gb|AAF84112.1|AE003963_9 conserved hypothetical protein [Xylella fastidiosa 9a5c] Length = 396 Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 126/363 (34%), Positives = 200/363 (55%), Gaps = 15/363 (4%) Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK 70 +G+W + A +++ + + SIQ ++ I ++D+ GA ++ F + K Sbjct: 47 LSGSWVLANVLT-ASELLQSYSNSIQH----INARNIDQLDSAGALQLLRFATRTGLKND 101 Query: 71 LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF-FYNSFKNLHYHIGKKIVKFINDSCSQA 129 G L S I + KP+R + F + + L + K + I D CS Sbjct: 102 AIGFREEHRPLISTIEILDDEY---PKPERDYGFLAALERLGIAV-VKTRRNIVDVCS-- 155 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 LG + + +F+ + S + M VG+ VP+V+++S++ GAVIA G+ Sbjct: 156 -FLGENLVKIAQLAREPRRFR--ITSTVHHMEQVGLDAVPLVVVLSYLVGAVIAFLGSTI 212 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L FGAEIF ++L++I LRE VLLTA+++AGR+ SA A+IG+MK EEIDAI+T+GL Sbjct: 213 LRNFGAEIFVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEIDAIQTLGL 272 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 D + +L+ PR+ AL++ LPLLT +A + + G V IP ++ SR H T + Sbjct: 273 DPIDLLVIPRLIALLVMLPLLTFIAMIAGLAGGITVGAFDLGIPPQMYLSRMHETMQFRH 332 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 G+ KAP A IG++ EG V + S+GK T+ VVQ+IS+VIIID+L A+++ Sbjct: 333 FIIGMSKAPLFALIIGLIGCLEGLKVTGTAQSVGKHTTSSVVQTISLVIIIDALAALWFM 392 Query: 370 AIG 372 +G Sbjct: 393 RMG 395 >gi|307297001|ref|ZP_07576817.1| protein of unknown function DUF140 [Sphingobium chlorophenolicum L-1] gi|306877527|gb|EFN08755.1| protein of unknown function DUF140 [Sphingobium chlorophenolicum L-1] Length = 376 Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 116/370 (31%), Positives = 199/370 (53%), Gaps = 14/370 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 G TV R +GN + ++ + + +I+ +DLS + +DTIGA ++ + Sbjct: 19 REGRTVIRLSGNLSIACLHDLPNRL-----DAIEGPVDTIDLSGVDHMDTIGAWVLHRTI 73 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ KI G E+L + + N +P ++ + IG+ +V Sbjct: 74 KRLDCKIT--GDKCDAERLITTVGSVDEPV--NIRPDHE---PPWQRVVGQIGEAVVNSG 126 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 G + T +F+ + +++++ VGVS + ++ L+SF+ G VI Sbjct: 127 TTLLGLLGFFGGTLVATWNVIRHPGRFR--INAVVQRFEVVGVSALGIIGLMSFLIGIVI 184 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQG+ QL QFG E+ +I+L+ L RE+GVL+TA+M+AGRSGSA A++G+MK+ EE+D Sbjct: 185 AQQGSVQLRQFGMEMLTINLVGRLTFRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEVD 244 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+RT+G+ + L+ PR A+++ +PLL+ A+ AIIG + DIP F R Sbjct: 245 AMRTIGVSPMEALVLPRTLAVVVMMPLLSFYASIVAIIGGGFLCAVSLDIPPITFVQRLR 304 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + +++ GLIKAP I + +G V ++ +G + T VVQ+I +VI++D+ Sbjct: 305 EVVPIHDLWVGLIKAPVFGVIIALAGCFQGMQVKANAEEVGLRTTAAVVQAIFLVIVLDA 364 Query: 363 LFAIFYFAIG 372 FA+F+ +G Sbjct: 365 FFAVFFTWVG 374 >gi|82702739|ref|YP_412305.1| hypothetical protein Nmul_A1612 [Nitrosospira multiformis ATCC 25196] gi|82410804|gb|ABB74913.1| Protein of unknown function DUF140 [Nitrosospira multiformis ATCC 25196] Length = 384 Score = 189 bits (480), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 117/365 (32%), Positives = 198/365 (54%), Gaps = 11/365 (3%) Query: 13 GNWKSPEISEIADDVVMAINKS--IQSDSAIVDLSAITEIDTIGAELIMYFM-EKYHGKI 69 GNW + + + + + ++S + + VDL + +DT GA + + + G++ Sbjct: 25 GNWTLENYAALGEQIALLRHRSRGLAAAGRNVDLGGLAALDTAGAARLYELLGAELAGEL 84 Query: 70 KL-QGVSTHIEQLFSLISFTHRKKIK-NQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 +S L +++ K +Q+ QR F F H G + F + Sbjct: 85 AASDALSRERSALLLMVAKAMEAAGKVSQRRQRGAFIEIFG----HAGVALEIFRQQILA 140 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +G + +++ L S++ Q++ G++ VP++ L++F+ GAVIA GA Sbjct: 141 LLGFMGFTLDALARGLLHPKRWR--LTSIVAQIHETGLNAVPIIALLNFMVGAVIAFLGA 198 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L+ FGA I++++L++ LRE+GVLLTA+++AGR+ S A++GSMKINEEIDA R + Sbjct: 199 TVLANFGASIYTVNLVTFAFLRELGVLLTAILMAGRTASTFTAQLGSMKINEEIDATRVL 258 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GL+ V +L+ PR+ AL +SLP+LT + S I+G ++V DI A+F + F L Sbjct: 259 GLNPVNLLVLPRVLALFVSLPILTFVGMISGILGGALVCALQLDISLAMFLTIFQDQIEL 318 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + G+ KAP A IG++ EG V + S+G+ T VV SI +VI +D++ A+F Sbjct: 319 RHFLVGMSKAPVFAFVIGVIGCLEGLKVSGSALSVGQHTTASVVHSIFVVIFLDAMAALF 378 Query: 368 YFAIG 372 + +G Sbjct: 379 FMEMG 383 >gi|194364302|ref|YP_002026912.1| hypothetical protein Smal_0524 [Stenotrophomonas maltophilia R551-3] gi|194347106|gb|ACF50229.1| protein of unknown function DUF140 [Stenotrophomonas maltophilia R551-3] Length = 373 Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 122/366 (33%), Positives = 202/366 (55%), Gaps = 21/366 (5%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66 + R +G W + + + A +V+ + ++ +D + I ++D+ G ++ + Sbjct: 21 LIRLSGTW-TLKTALAAAEVLRDVPDTLTG----IDATGIEKMDSAGVLQVLRVAHRADL 75 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF-FYNSFKNL--HYHIGKKIVKFIN 123 G+ LQ H +L+ KP+R F + + L H +K + Sbjct: 76 GEDALQFRPDH----QALVCTIEEVADDRPKPKRDFGVLAALERLGVSVHATGHNIKAL- 130 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 CS LG + +F+ L + + QM VG+ VP+V L+S++ GAVIA Sbjct: 131 --CS---FLGENLVKAARLVKEPRRFR--LTATVHQMEQVGLDAVPLVALLSYLVGAVIA 183 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 G+ L FGAEI+ ++L++I LRE VLLTA+++AGR+ SA A+IG+MK EEIDA Sbjct: 184 FLGSTILRDFGAEIYVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKAREEIDA 243 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +RT+GLD + +L+ PR++AL+++LPLLT +A + + G V DIP ++ +R H Sbjct: 244 MRTLGLDPIDLLVLPRLFALLVTLPLLTFIAMVAGLAGGITVGAFDLDIPPQMYIARMHD 303 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 T + ++ GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VIIID+ Sbjct: 304 TMEVRHMLVGLSKAPVFALVIGLIGCLEGLKVEGTAQSVGERTTSSVVQTISLVIIIDAF 363 Query: 364 FAIFYF 369 A+++ Sbjct: 364 AALWFM 369 >gi|237808113|ref|YP_002892553.1| hypothetical protein Tola_1352 [Tolumonas auensis DSM 9187] gi|237500374|gb|ACQ92967.1| protein of unknown function DUF140 [Tolumonas auensis DSM 9187] Length = 381 Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 117/377 (31%), Positives = 210/377 (55%), Gaps = 24/377 (6%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIV--DLSAITEIDTIGAELIMY 60 E+G + R +G+W + + ++ + + +D+ I+ DL ++ DT GA L++ Sbjct: 15 ESGHVLLRISGDWTLTHYVMLKRQIT-SVQEQMIADTPILWDDLGSL---DTAGAALLVE 70 Query: 61 FMEKYHGKIKLQGVSTH--------IEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHY 112 + G+++L ++T + L S+ + ++P+ S + + Sbjct: 71 LL----GQVRLSLLTTQDSGLSAERLALLHSVAAALKESTNIEKQPKES----AISEMLA 122 Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172 HIG+ ++ + +GL I +++ + SL + G++ +P++ Sbjct: 123 HIGQVVIHLGQQQIALLGFIGLTIETLVRSLIHPRRWR--ITSLAAHIEQTGLNAIPIIA 180 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 L++F+ GAV+A G LS FGA I+++DL++ LRE GVLLTA+++AGR+ SA A+I Sbjct: 181 LLTFLVGAVVAFLGTTVLSDFGASIYTVDLVAFAFLREFGVLLTAILMAGRTASAFTAQI 240 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 GSMK NEEIDAIR +GL+ + +L+ PR+ A++ISLP+LT +A +IG ++V + DI Sbjct: 241 GSMKANEEIDAIRALGLNPIELLVLPRVLAMLISLPILTFIAMACGMIGGAVVCFLELDI 300 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 +F + +++ F G+ KAP A + ++ EGF VG + S+G+ + VVQ Sbjct: 301 TPRLFLTILQRDIDISHFFVGIGKAPLFAFIVAVIGCLEGFKVGGSAQSVGEHTISSVVQ 360 Query: 353 SISIVIIIDSLFAIFYF 369 SI +VI++D+L A+F+ Sbjct: 361 SIFMVILLDALAALFFM 377 >gi|153951693|ref|YP_001398923.1| ABC transporter permease [Campylobacter jejuni subsp. doylei 269.97] gi|152939139|gb|ABS43880.1| putative ABC transporter, permease protein [Campylobacter jejuni subsp. doylei 269.97] Length = 369 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 126/379 (33%), Positives = 197/379 (51%), Gaps = 24/379 (6%) Query: 7 TVFRFAGN-------WKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 T F+F N W I ++ +A+ IQS I D + EIDT G + Sbjct: 3 TNFKFQNNTLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKEIDTAGVRFFL 59 Query: 60 YF---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF--FYNSFKNLHYHI 114 ++ + KI +G+++ + LF L +++ K +K ++F ++ L + Sbjct: 60 ALENDLKDKNIKITKEGLNSRFQTLFELCEKNYQRLNKTKKSHKNFSEYFIDLGKLSLEL 119 Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 K + KFIN + + L L + N F +F FL + + +P+VIL Sbjct: 120 LKILRKFINFTGAFFTSLFLCLKNPKNF-----RFIAFLYHIENSAF----KALPIVILT 170 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 + + G V+A Q A+QL+QFGA IF +DLM I RE+ L+ A++IAGRS S+ A+IG Sbjct: 171 ALLVGVVLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGV 230 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 MKI +EI A+ TMG +I PR+ AL++++PL+ +++ +IIG +V DI F Sbjct: 231 MKITDEIAAMNTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISF 290 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 A F RF + +IF GL+KAP IG++A GF V + S+G T VV +I Sbjct: 291 AEFLRRFREAVDIKHIFIGLVKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAI 350 Query: 355 SIVIIIDSLFAIFYFAIGI 373 VI D+LF++ + GI Sbjct: 351 FWVIAFDALFSVILTSAGI 369 >gi|296284592|ref|ZP_06862590.1| putative ABC transport system permease protein [Citromicrobium bathyomarinum JL354] Length = 370 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 118/371 (31%), Positives = 198/371 (53%), Gaps = 14/371 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + G TV R G + I+ + + + + D ++DL+ ++EIDT+GA Sbjct: 12 GDGGRTVLRLKGPYLLSTIANVDRGL-----RKLDDDIDVIDLAEVSEIDTVGAWFACTL 66 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + I + S ++L + + + P+ + + + G+K+ + Sbjct: 67 ARNHSASI--ENASERADRLLTAVGESANSS-DVSAPRLPLLTRAPEAM----GEKVFEA 119 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 S G +++ +F+ +++ Q VGV+ +P++ L+SF+ G V Sbjct: 120 GRGIVSVVGFFGQILAGAASLIRHPRRFR--HRAMVHQFESVGVNALPIIGLMSFLIGIV 177 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IAQQGA QL FGAE +++L+ + LRE+GVL+TA+M+AGRSGSA A+IG+MK+ EEI Sbjct: 178 IAQQGAVQLQAFGAEALTVNLVGRITLRELGVLMTAIMVAGRSGSAFAAQIGTMKLTEEI 237 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+RT+G+ V +L+ PR+ A + + LL A+ AIIG ++V IPF F R Sbjct: 238 DAMRTIGISPVEVLVIPRLVACVFMMILLGFYASCMAIIGGAVVSDVMLGIPFWTFLMRI 297 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 H +++ G+IKAP +G+ +G V +S +G + T VVQ+I VI++D Sbjct: 298 HEVVPAHDVWVGMIKAPVFGLIVGMSGCYQGMQVRGNSEEVGLRTTKAVVQAIFTVIVLD 357 Query: 362 SLFAIFYFAIG 372 + FA+F+ IG Sbjct: 358 AFFAVFFTGIG 368 >gi|326388333|ref|ZP_08209929.1| hypothetical protein Y88_3216 [Novosphingobium nitrogenifigens DSM 19370] gi|326207065|gb|EGD57886.1| hypothetical protein Y88_3216 [Novosphingobium nitrogenifigens DSM 19370] Length = 370 Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 106/340 (31%), Positives = 183/340 (53%), Gaps = 8/340 (2%) Query: 33 KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKK 92 + I++ A +DL+ + +DT+GA +I H + + K Sbjct: 37 REIETPIARIDLADVPMMDTVGAWTCWRLSRDTGAEI------VHPCEAAERLIGALEKV 90 Query: 93 IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGF 152 +P ++ + + +G + + G ++ T +F+ Sbjct: 91 DDGGEPTQAGGLPVWLRVPAKVGDTVFGLAAGAVEVLGFFGQMLLATWGLLRHPGRFR-- 148 Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 +L+ QM VGV+ + +V L+SF+ G VIAQQGA QL QFGAE+++++L+ L LRE+G Sbjct: 149 FNALVHQMELVGVNALAIVGLMSFLVGIVIAQQGAVQLRQFGAEVYTVNLVGRLTLRELG 208 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 +L+TA+M+AGRSGSA A++G+MK+NEEIDA+RT+G+ + L+ PRI A ++ LP+L + Sbjct: 209 ILMTAIMVAGRSGSAFAAQLGTMKLNEEIDAMRTIGVSPMEALVLPRILATVLMLPVLGV 268 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 + IIG + + DIPF F +R + +++ GL K P + + +G Sbjct: 269 YSAVVGIIGGAFLSSLTLDIPFFSFLARIREVVPVHDVWVGLFKGPVFGLIVSVAGCYQG 328 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 V ++ +G + T+ VV +I VI++D+ FA+F+ +G Sbjct: 329 MQVKANAEEVGLRTTSAVVMAIFTVIVLDAFFAVFFTEVG 368 >gi|300312192|ref|YP_003776284.1| organic solvents resistance ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300074977|gb|ADJ64376.1| ABC-type transport system involved in resistance to organic solvents, permease component protein [Herbaspirillum seropedicae SmR1] Length = 380 Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 110/369 (29%), Positives = 200/369 (54%), Gaps = 12/369 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 V G+W ++ + A + + +++ SA++ DT+GA+L++ + Sbjct: 19 VLHVEGDWTLRNYRALSRQIAQA--RPALGEQTVLEFSALSAFDTVGAKLLVDLLGVPAA 76 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKI----KNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + Q ST +L++ K K P++++ + + +G + Sbjct: 77 LRQTQADSTLAPAWRALLAVVAEAKAIAMPKPAPPRQAWITDMLE----RVGAATLSLRA 132 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 + +GL + +++ + +++ Q+ G+ VP+V L++F+ GAV+A Sbjct: 133 CALGLLGFMGLCLQTLLSSFWRPSRWR--VTAVVAQIEQTGLDAVPIVSLLTFMVGAVVA 190 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 GA L+ FGA I+++DL++ LRE VLLTA+++AGR+ S+ A+IGSMK NEEIDA Sbjct: 191 FLGATVLANFGASIYTVDLVAFSFLREFAVLLTAILMAGRTASSFTAQIGSMKANEEIDA 250 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 IR +GLD +++L+ PR+ AL++++P LT +A S + G ++V DI +F S Sbjct: 251 IRALGLDPIKLLVLPRLIALLVAMPALTFIAMLSGLFGGAMVCALSLDISPTMFLSLLQQ 310 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + + G++KAP A + ++ EGF V + S+G+ T+ VVQSI +VI++D+L Sbjct: 311 DVGIRHFILGMVKAPLFAFVVAVIGCNEGFKVSGSAQSVGQHTTSSVVQSIFVVILLDAL 370 Query: 364 FAIFYFAIG 372 A+F+ +G Sbjct: 371 AALFFMEMG 379 >gi|83858858|ref|ZP_00952380.1| ABC transporter, permease protein, putative [Oceanicaulis alexandrii HTCC2633] gi|83853681|gb|EAP91533.1| ABC transporter, permease protein, putative [Oceanicaulis alexandrii HTCC2633] Length = 384 Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 120/367 (32%), Positives = 182/367 (49%), Gaps = 17/367 (4%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72 G+W + D + I ++DLS + IDT GA Y + + + + Sbjct: 29 GDWLMEAVGRF-DRRLRRIESETDPKDLVIDLSGLGRIDTAGA----YVLGRTLSRCREP 83 Query: 73 GVSTHIEQLFSLISFTHRKKIKN--QK----PQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 H F T R+ + Q+ P+ + IG+ + + ++ Sbjct: 84 DADRH----FIGEHQTARRMMGEMLQRLADCPEDEIQPRGVISTLARIGQGVEDGLKETV 139 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 G + + K + S I M GV +P++ ++SF GAV+A G Sbjct: 140 ESFAFFGRTFTTGLSVLVNPTKMR--WTSTIHLMETAGVDALPIISVLSFFIGAVVAFMG 197 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A L FGA +F++DL+ I LRE GV++TA+++AGRS SA A IGSMK+ +EIDA++ Sbjct: 198 ASLLETFGASVFTVDLVGIAVLREFGVIITAILLAGRSDSAFTAAIGSMKMQQEIDAMKV 257 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MGLD +L+ PR+ A ++ PLLT+ A + + G +V W DI F +R + T Sbjct: 258 MGLDPYEVLVLPRVIACVVMAPLLTLSAMVAGVFGGMLVSWMTLDISPNFFLTRLNDTID 317 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L + G+ KAP I IV + G VG SLGK+VTT VVQ+I VI+ID+LFA+ Sbjct: 318 LKHFLVGMSKAPVFGLVIAIVGCRHGLQVGGDVESLGKRVTTSVVQAIFAVIVIDALFAM 377 Query: 367 FYFAIGI 373 Y + I Sbjct: 378 MYLELDI 384 >gi|329851286|ref|ZP_08266043.1| hypothetical protein ABI_41270 [Asticcacaulis biprosthecum C19] gi|328840132|gb|EGF89704.1| hypothetical protein ABI_41270 [Asticcacaulis biprosthecum C19] Length = 363 Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 123/370 (33%), Positives = 195/370 (52%), Gaps = 21/370 (5%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + R GNW I +++ + A+ KS Q + VD S I +DT GA Y + G Sbjct: 1 MLRPKGNWIVTRIEGLSERLRQAL-KSYQQIT--VDGSQIEALDTAGA----YLLRTAVG 53 Query: 68 KIKLQGV----STHIEQLFSLISFTHRKKI-----KNQKPQRSFFYNSFKNLHYHIGKKI 118 +LQG + +L+ ++ H I +N +P + + + + L +GK Sbjct: 54 D-RLQGEVFAGQDNFARLYGIVG-NHAAPISNYAQENPEPPKMWLHPFYFGL-VKLGKLA 110 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 +F +QA +G +I+ A + +L+ M G+ +P+V++ SF Sbjct: 111 ERFKTGFIAQAVFMGHIIAQLMISIAKPGSMR--WAALVNVMQRAGIEAIPIVLMTSFFI 168 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GAV+ G QL+QFG+ IF++D++++ LRE L+TAV++AGRS SA AE+G+MK+N Sbjct: 169 GAVLGFIGVLQLNQFGSGIFAVDMVAMFALREFAPLVTAVLLAGRSASAFAAEVGAMKMN 228 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 +EIDA+R MG+D LI PR+ L++ +T L+ + G + IW +VF Sbjct: 229 QEIDAMRVMGIDPYEALILPRLIGLVLMSTFITFLSTLGMMFGGMLAIWSALGAGPSVFL 288 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 R N F G+++ PF A I IV +G V SLG++VTT VVQSI +V Sbjct: 289 QRVQDYVPFYNFFVGIVRPPFFAATIAIVGCWQGMQVKDDVLSLGRQVTTAVVQSIFLVF 348 Query: 359 IIDSLFAIFY 368 ++D+LFAI + Sbjct: 349 MLDALFAILF 358 >gi|294010007|ref|YP_003543467.1| ABC-type transport system permease component LinK [Sphingobium japonicum UT26S] gi|292673337|dbj|BAI94855.1| ABC-type transport system permease component LinK [Sphingobium japonicum UT26S] Length = 376 Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 116/370 (31%), Positives = 197/370 (53%), Gaps = 14/370 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 G TV R +GN + ++ D + +I+ +DLS + +DTIGA ++ + Sbjct: 19 REGRTVIRLSGNLSIACLHDLPDRL-----DAIEGPVDTIDLSDVGHMDTIGAWVLHRAI 73 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I G E+L + + N +P ++ + IG+ +V Sbjct: 74 KRLDCGIT--GDKCDAERLIATVGSVDEPV--NIRPDHE---PPWQRVVGQIGEAVVNSG 126 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 G + T +F+ + +++++ VGVS + ++ L+SF+ G VI Sbjct: 127 TTLLGLLGFFGGTLVATWNVIRHPGRFR--INAVVQRFEVVGVSALGIIGLMSFLIGIVI 184 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQG+ QL QFG E+ +I+L+ L RE+GVL+TA+M+AGRSGSA A++G+MK+ EE+D Sbjct: 185 AQQGSVQLRQFGMEMLTINLVGRLTFRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEVD 244 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+RT+G+ + L+ PR A+++ +PLL ++ AIIG + DIP F R Sbjct: 245 AMRTIGVSPMEALVLPRTLAVVVMMPLLGFYSSIVAIIGGGFLCAVSLDIPPITFVQRLR 304 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + +++ GLIKAP I + +G V ++ +G + T VVQ+I +VI+ID+ Sbjct: 305 EVVPIHDLWVGLIKAPVFGVIIALAGCFQGMQVKANAEEVGLRTTAAVVQAIFLVIVIDA 364 Query: 363 LFAIFYFAIG 372 FA+F+ +G Sbjct: 365 FFAVFFTWVG 374 >gi|332187454|ref|ZP_08389192.1| hypothetical protein SUS17_2546 [Sphingomonas sp. S17] gi|332012615|gb|EGI54682.1| hypothetical protein SUS17_2546 [Sphingomonas sp. S17] Length = 368 Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 116/366 (31%), Positives = 191/366 (52%), Gaps = 18/366 (4%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 RF GN + ++ + + S+Q +DLS + IDT+GA L+ F + Sbjct: 17 LRFTGNLSLATLGDLPERLDRE-EASVQR----IDLSQVDRIDTVGAWLVHRFAARNDAA 71 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKP--QRSFFYNSFKNLHYHIGKKIVKFINDSC 126 I +G+ + L K ++ +P R + F + +G ++ Sbjct: 72 I--EGLDENQRNLVD-------KVVEADQPVAMRPQPISPFARVAGEVGDAVITAFKTLY 122 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 +G + +F+ +++ + VGVS + ++ L+SF+ G VIAQQG Sbjct: 123 GLLGFMGATVIAGFAVLRHPRRFR--FNAVVHEFETVGVSALAIIGLMSFLIGIVIAQQG 180 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A QL QFGAE+F+I+L+ L LRE+GVL+TA+M+AGRSGSA A++G+MK+ EEIDA+R Sbjct: 181 AVQLRQFGAEVFTINLVGRLTLRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEIDAMRV 240 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +G+ + L+ PR A + +PLL ++ A+IG + IP F +R Sbjct: 241 IGVSPMEALVLPRTIAAVTLMPLLGFYSSLIAMIGGCFLAAVSLGIPPVTFIARIREVVP 300 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + +++ GLIKAP I I +G V + +G + T VVQ+I +VI++D+ FA+ Sbjct: 301 ITDLYVGLIKAPVFGAIIAIAGCFQGMQVKSDAEQVGLRTTAAVVQAIFLVIVLDAFFAV 360 Query: 367 FYFAIG 372 F+ +G Sbjct: 361 FFTWLG 366 >gi|283957032|ref|ZP_06374504.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 1336] gi|283791533|gb|EFC30330.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 1336] Length = 369 Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 125/379 (32%), Positives = 196/379 (51%), Gaps = 24/379 (6%) Query: 7 TVFRFAGN-------WKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 T F+F N W I ++ +A+ IQS I D + IDT G + Sbjct: 3 TNFKFQNNTLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFL 59 Query: 60 YF---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF--FYNSFKNLHYHI 114 ++ + KI +G+++ + LF L +++ K +K ++F ++ L + Sbjct: 60 ALENDLKDKNIKITKEGLNSRFQTLFELCEKNYQRLSKTKKSHKNFSEYFIDLGKLSLEL 119 Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 K + KFIN + + L L + N F +F FL + + +P+VIL Sbjct: 120 LKILRKFINFTGAFFTSLFLCLKNPKNF-----RFIAFLYHIENSAF----KALPIVILT 170 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 + + G V+A Q A+QL+QFGA IF +DLM I RE+ L+ A++IAGRS S+ A+IG Sbjct: 171 ALLVGVVLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGV 230 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 MKI +EI A+ TMG +I PR+ AL++++PL+ +++ +IIG +V DI F Sbjct: 231 MKITDEIAAMNTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISF 290 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 A F RF + +IF GL+KAP IG++A GF V + S+G T VV +I Sbjct: 291 AEFLRRFREAVDIKHIFIGLVKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAI 350 Query: 355 SIVIIIDSLFAIFYFAIGI 373 VI D+LF++ + GI Sbjct: 351 FWVIAFDALFSVILTSAGI 369 >gi|260425314|ref|ZP_05779294.1| ABC transporter, inner membrane subunit [Citreicella sp. SE45] gi|260423254|gb|EEX16504.1| ABC transporter, inner membrane subunit [Citreicella sp. SE45] Length = 366 Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 116/334 (34%), Positives = 196/334 (58%), Gaps = 7/334 (2%) Query: 43 DLSAITEIDTIGAELIMYFMEK--YHGK-IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 DLS + +DT GA L+ G+ I + G S L ++ K ++P+ Sbjct: 37 DLSGVGVLDTAGAWLLASCRNAAALRGETIAVIGASPAQTLLLETVTDAMADAAKVRQPR 96 Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 +++ + +G+ + K ++ LGLV++ G + + L +L+ Sbjct: 97 G--LHHAMGDGLVGLGEAVSKKVSSIAESLGFLGLVMAQFGWTVLHPSRLR--LTALVHH 152 Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219 M+ G++ VP+V+L+ F+ G V++ QGA QL QFGAE++ +DL++I LRE+G+LLTAV+ Sbjct: 153 MHLAGLNAVPIVVLMGFLIGIVLSFQGASQLKQFGAEVYVVDLIAISILRELGILLTAVI 212 Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279 +AGRS SA A IGSMK+ EEIDA+R +GLD + +L+ PR+ AL+I LPLL +A+ + + Sbjct: 213 VAGRSASAFTATIGSMKMREEIDAMRVLGLDPIELLVLPRVLALVILLPLLGFIADMAGL 272 Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339 +G +++ W I +F ++ + ++++ GL KAP A IG+V +G V + Sbjct: 273 VGGALMAWIELGISPGMFRTQLLNNTDVSHLLIGLAKAPVFAVIIGVVGCHQGMQVKGDT 332 Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 SLG + + VV +I +VI++D++F+IF+ GI Sbjct: 333 ESLGNRTSRSVVAAIFLVIVVDAMFSIFFAVWGI 366 >gi|238784662|ref|ZP_04628667.1| ABC transporter, permease protein [Yersinia bercovieri ATCC 43970] gi|238714434|gb|EEQ06441.1| ABC transporter, permease protein [Yersinia bercovieri ATCC 43970] Length = 381 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 124/370 (33%), Positives = 202/370 (54%), Gaps = 24/370 (6%) Query: 13 GNW-------KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 G+W PE++++ ++ A+ + DLS + +DT GA L++ + + Sbjct: 25 GDWVLAHYRALEPEVTQLRANLPAAV---------VFDLSQLGALDTAGATLLVLLLGEE 75 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF-KNLHYHIGKKIVKFIND 124 K +L+ ++ + ++ T + + P+ + F L +IG+ + D Sbjct: 76 RVK-QLRKLAPTLPDERRVLLETVSHVLPDLTPEPATKAPPFWLELLSNIGRSMDNLWQD 134 Query: 125 SCSQAHILGLVISN--TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 S +GL + + F S ++ SLI + +G++ VP+++L++F+ GAVI Sbjct: 135 IKSLLGFVGLTLEALLSTIFRPSRWRMT----SLIANIQQIGLNAVPIIMLLTFLVGAVI 190 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A GA L+ FGA IF++DL+ LRE VLLTA+++AGR+ SA AEIG MK NEEID Sbjct: 191 AFLGATVLTTFGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEID 250 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 AI+T+GL+ V +L+ PR+ AL+ISLP+LT + I G +V DI +F S Sbjct: 251 AIQTLGLNPVELLVLPRVLALLISLPMLTFIGMICGIFGGMVVCALTLDISPTMFLSIMQ 310 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 ++ L + G+ KAP A I I+ EGF V + S+G TT VV SI +VI++D+ Sbjct: 311 NSNGLQHFLVGISKAPVFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDA 370 Query: 363 LFAIFYFAIG 372 + A+F+ +G Sbjct: 371 VAALFFMEMG 380 >gi|57238657|ref|YP_179788.1| ABC transporter, permease protein, putative [Campylobacter jejuni RM1221] gi|57167461|gb|AAW36240.1| ABC transporter, permease protein, putative [Campylobacter jejuni RM1221] gi|315059096|gb|ADT73425.1| Putative ABC transport system permease protein [Campylobacter jejuni subsp. jejuni S3] Length = 369 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 126/379 (33%), Positives = 195/379 (51%), Gaps = 24/379 (6%) Query: 7 TVFRFAGN-------WKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 T F+F N W I ++ +A+ IQS I D + IDT G + Sbjct: 3 TNFKFQNNTLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFL 59 Query: 60 YF---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF--FYNSFKNLHYHI 114 ++ + KI +G+++ + LF L +++ K +K ++F ++ L + Sbjct: 60 ALENDLKDKNIKITKEGLNSRFQTLFELCEKNYQRLSKTKKSHKNFSEYFIDLGKLSLEL 119 Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 K + KFIN + + L L + N F +F FL + + +P+VIL Sbjct: 120 LKILRKFINFTGAFFTSLFLCLKNPKNF-----RFIAFLYHIENSAF----KALPIVILT 170 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 + + G V+A Q A+QL+QFGA IF +DLM I RE+ L+ A++IAGRS S+ A+IG Sbjct: 171 ALLVGVVLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGV 230 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 MKI +EI A+ TMG +I PR+ ALI+++PL+ +++ +IIG +V DI F Sbjct: 231 MKITDEIAAMNTMGFRSFEFIIIPRVMALIVAMPLIVAISDAISIIGGMMVAKLNLDISF 290 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 A F RF + +IF GL KAP IG++A GF V + S+G T VV +I Sbjct: 291 AEFLRRFREAVDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAI 350 Query: 355 SIVIIIDSLFAIFYFAIGI 373 VI D+LF++ + GI Sbjct: 351 FWVIAFDALFSVVLTSAGI 369 >gi|261885878|ref|ZP_06009917.1| MTA/SAH nucleosidase [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 354 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 114/337 (33%), Positives = 186/337 (55%), Gaps = 19/337 (5%) Query: 33 KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKK 92 +S++ D+ +DL + ID A F K++ KL + +++F+L+S + Sbjct: 32 RSLKVDT--LDLKNLIRIDYSAAT----FFAKHYNCPKLINSNDKFDKIFALVSDKYILN 85 Query: 93 IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSY--KFK 150 ++ K ++S NL IGK I+ N+ S LG + N + + + +FK Sbjct: 86 LQIIKFKKS-------NLIEQIGKNIINLKNELVSFCIFLGEFLFNLTKSLLNPFTVRFK 138 Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210 L Y G+S V +V L SF+ G V+A QGA L FGA I+ +D+M I+ LRE Sbjct: 139 ----ELSNHFYSAGISAVFIVCLTSFLIGIVLAYQGATMLENFGASIYVVDIMGIMTLRE 194 Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 +G L+ A+++AGRS S+ A+IG MKI +E++A++TMG + R ++ PR+ ALI+++P + Sbjct: 195 VGPLIAAIVVAGRSASSYTAQIGVMKITDELEAMKTMGFEPFRFIVMPRVLALILAMPFI 254 Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330 LAN +I G +V Y D+ F+ + RF S+ L + + GL KAPF I ++ K Sbjct: 255 VFLANAVSIFGQMMVCNWYLDLSFSDYLERFRSSIALRHFWVGLFKAPFFGAVIALIGCK 314 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 GF V NS+G+ T VV I + +D++F ++ Sbjct: 315 RGFEVSGSINSVGELTTRSVVHEIFWISALDAIFLLY 351 >gi|157415866|ref|YP_001483122.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 81116] gi|157386830|gb|ABV53145.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 81116] gi|307748503|gb|ADN91773.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni M1] gi|315931385|gb|EFV10354.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 327] Length = 369 Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 124/372 (33%), Positives = 195/372 (52%), Gaps = 18/372 (4%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---ME 63 T+F F G W I ++ +A+ IQS I D + IDT G + ++ Sbjct: 11 TLFIF-GIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLK 66 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF--FYNSFKNLHYHIGKKIVKF 121 + KI +G+++ + LF L +++ K +K ++F ++ L + K ++KF Sbjct: 67 DKNIKITKEGLNSRFQTLFELCEKNYQRLSKTKKSHKNFSEYFIDLGKLSLELLKILIKF 126 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 N + + L L + N F +F FL + + +P+VIL + + G V Sbjct: 127 TNFTGAFFTSLFLCLKNPKNF-----RFIAFLYHIENSAF----KALPIVILTALLVGVV 177 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A Q A+QL+QFGA IF +DLM I RE+ L+ A++IAGRS S+ A+IG MKI +EI Sbjct: 178 LAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEI 237 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 A+ TMG +I PR+ AL++++PL+ +++ +IIG +V DI FA F RF Sbjct: 238 AAMNTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRF 297 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + +IF GL KAP IG++A GF V + S+G T VV +I VI D Sbjct: 298 REAVDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFD 357 Query: 362 SLFAIFYFAIGI 373 +LF++ + GI Sbjct: 358 ALFSVVLTSAGI 369 >gi|94496554|ref|ZP_01303130.1| hypothetical protein SKA58_17657 [Sphingomonas sp. SKA58] gi|94423914|gb|EAT08939.1| hypothetical protein SKA58_17657 [Sphingomonas sp. SKA58] Length = 369 Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 118/379 (31%), Positives = 200/379 (52%), Gaps = 30/379 (7%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +G TV R +GN + ++ + ++Q VD+S + IDTIGA + Sbjct: 11 QRDGGTVIRLSGNLAIACLHDLPARL-----DAVQGPINAVDVSQVDHIDTIGAWTVHSA 65 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 ++ + I G + ++L + + +P + + + IG ++ Sbjct: 66 AKRLNAPIT--GANEDAQRLIEAVGTLDEPF--SLRPDK---VSPLTRVVGQIGDAVIS- 117 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLL--------SLIRQMYYVGVSGVPVVIL 173 + ++GL+ G F AS G + +++++ VGVS + ++ L Sbjct: 118 -----AGTTLMGLL----GFFGASLVAAWGLIRHPSRFRVNAVVQRFEVVGVSALGIIGL 168 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 +SF+ G VIAQQG+ QL QFG E+ +I+L+ L RE+GVL+TA+M+AGRSGSA A++G Sbjct: 169 MSFLIGIVIAQQGSVQLRQFGMEMLTINLVGRLTFRELGVLMTAIMVAGRSGSAFAAQLG 228 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 +MK+ EEIDA+RT+G+ + L+ PR A+++ +PLL A+ A+IG + DIP Sbjct: 229 TMKLTEEIDAMRTIGVSPMEALVMPRTLAVVVMMPLLGFYASIVAVIGGGFLCAVALDIP 288 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 F R + +++ GLIKAP I + +G V ++ +G + T VVQ+ Sbjct: 289 PITFVQRLREVVPITDLWVGLIKAPVFGIIIALSGCYQGMQVKANAEEVGLRTTAAVVQA 348 Query: 354 ISIVIIIDSLFAIFYFAIG 372 I +VI+ID+ FA+F+ +G Sbjct: 349 IFLVIVIDAFFAVFFTWVG 367 >gi|86152328|ref|ZP_01070539.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|121613751|ref|YP_001001289.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 81-176] gi|167006183|ref|ZP_02271941.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 81-176] gi|315125046|ref|YP_004067050.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85840817|gb|EAQ58068.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|87249848|gb|EAQ72807.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 81-176] gi|315018768|gb|ADT66861.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 369 Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 125/372 (33%), Positives = 195/372 (52%), Gaps = 18/372 (4%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---ME 63 T+F F G W I ++ +A+ IQS I D + IDT G + ++ Sbjct: 11 TLFIF-GIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLK 66 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF--FYNSFKNLHYHIGKKIVKF 121 + KI +G+++ + LF L +++ K +K ++F ++ L + K + KF Sbjct: 67 DKNIKITKEGLNSSFQTLFELCEKNYQRLSKTKKSHKNFSEYFIDLGKLSLELLKILRKF 126 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 IN + + L L + N F +F FL + + +P+VIL + + G V Sbjct: 127 INFTGAFFTSLFLCLKNPKNF-----RFIAFLYHIENSAF----KALPIVILTALLVGVV 177 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A Q A+QL+QFGA IF +DLM I RE+ L+ A++IAGRS S+ A+IG MKI +EI Sbjct: 178 LAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEI 237 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 A+ TMG +I PR+ AL++++PL+ +++ +IIG +V DI FA F RF Sbjct: 238 AAMNTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRF 297 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + +IF GL KAP IG++A GF V + S+G T VV +I VI D Sbjct: 298 REAVDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFD 357 Query: 362 SLFAIFYFAIGI 373 +LF++ + GI Sbjct: 358 ALFSVILTSAGI 369 >gi|238759499|ref|ZP_04620662.1| ABC transporter, permease protein [Yersinia aldovae ATCC 35236] gi|238702274|gb|EEP94828.1| ABC transporter, permease protein [Yersinia aldovae ATCC 35236] Length = 381 Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 118/335 (35%), Positives = 187/335 (55%), Gaps = 4/335 (1%) Query: 39 SAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 SA+ D S + +DT GA L+ + + L+ ++ + ++ T + + N P Sbjct: 49 SAMFDFSQLGGLDTAGATLLATLLGELRVS-NLRELAPRLPDERRVLLETVSQVLPNLVP 107 Query: 99 QRSFFYNSFK-NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLI 157 Q + F L IG+ + D S +GL + +++ + SLI Sbjct: 108 QLTVKPQPFWIGLLVPIGQSVDNLWQDFKSLLGFVGLTLEALLGTVFRPARWR--VTSLI 165 Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 + +G++ VP+++L++F+ GAVIA GA L+ FGA IF++DL+ LRE VLLTA Sbjct: 166 ANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTTFGAGIFTVDLVVFSFLREFAVLLTA 225 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +++AGR+ SA AEIG MK NEEIDAI+T+GL+ V +L+ PR+ AL+ISLP+LT + Sbjct: 226 ILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPVELLVLPRVLALLISLPMLTFIGMIC 285 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 I G +V DI +F + ++ L ++ G+ KAP A I I+ EGF V Sbjct: 286 GIFGGMVVCALALDISPTMFLTIMQNSNGLQHLLVGISKAPIFAFLIAIIGCLEGFKVSG 345 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 + S+G TT VV SI +VI++D++ A+F+ +G Sbjct: 346 SAESVGMHTTTSVVHSIFVVILLDAVAALFFMEMG 380 >gi|197105491|ref|YP_002130868.1| ABC transporter, permease protein [Phenylobacterium zucineum HLK1] gi|196478911|gb|ACG78439.1| ABC transporter, permease protein [Phenylobacterium zucineum HLK1] Length = 375 Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 109/337 (32%), Positives = 184/337 (54%), Gaps = 14/337 (4%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHR-KKIKNQKPQR 100 +DLS + +DT GA ++ K++ + +L ++ R + Q+P+ Sbjct: 48 IDLSGVRRLDTAGAYAVVRAAGPAFDASKVE-ARPEVRRLLEVVDEAARIQPAVRQEPK- 105 Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQ----AHILGLVISNTGEFCASSYKFKGFLLSL 156 F +L +GK +V F +D H+L ++ + + K + +L Sbjct: 106 -----GFHDLTIRVGKGVVGFGHDFIDTMGFLGHLLVVLARSLVLLFVNPRKIR--WPAL 158 Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + M G+ +PVV + +F GAV+A GA L QFGAE+F+++L+ I +RE +++T Sbjct: 159 VSIMERAGLDAIPVVAVATFFIGAVVAFIGADMLQQFGAEVFAVELIGISMMREFNIVIT 218 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV++AGRS S+ AEIGSMK+++EIDA++ MG+D L+ PR AL+I++PLLT +A Sbjct: 219 AVLLAGRSASSFAAEIGSMKMSQEIDAMKVMGIDPFEALVFPRFAALLITIPLLTFVATL 278 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + ++G +V W + A F R + + + L KAP MA I + ++G G Sbjct: 279 AGLLGGIVVTWSVLGLGPAFFLQRIVDNVGVDHFWIALSKAPVMAGVIAGIGCRQGLETG 338 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 SLG++VT VV +I +I+ID++FA+ Y +G+ Sbjct: 339 GDVESLGRRVTAAVVHAIFAIIVIDAIFAMIYMELGL 375 >gi|86149247|ref|ZP_01067478.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|88596442|ref|ZP_01099679.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|218563235|ref|YP_002345015.1| putative ABC transporter permease [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85840029|gb|EAQ57287.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|88191283|gb|EAQ95255.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|112360942|emb|CAL35743.1| putative ABC transport system permease [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926840|gb|ADC29192.1| putative ABC transport system permease [Campylobacter jejuni subsp. jejuni IA3902] gi|315929480|gb|EFV08676.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 305] Length = 369 Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 124/379 (32%), Positives = 195/379 (51%), Gaps = 24/379 (6%) Query: 7 TVFRFAGN-------WKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 T F+F N W I ++ +A+ IQS I D + IDT G + Sbjct: 3 TNFKFQNNTLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFL 59 Query: 60 YF---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF--FYNSFKNLHYHI 114 ++ + KI +G+++ + LF L +++ K +K ++F ++ L + Sbjct: 60 ALENDLKNKNIKITKEGLNSRFQTLFELCEKNYQRLGKTKKSHQNFSEYFIDLGKLSLEL 119 Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 K + KFIN + + L L + N F +F FL + + +P+VIL Sbjct: 120 LKILRKFINFTGAFFTSLFLCLKNPKNF-----RFIAFLYHIENSAF----KALPIVILT 170 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 + + G V+A Q A+QL+QFGA IF +DLM I RE+ L+ A++IAGRS S+ A+IG Sbjct: 171 ALLVGVVLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGV 230 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 MKI +EI A+ TMG ++ PR+ AL++++PL+ +++ +IIG +V DI F Sbjct: 231 MKITDEIAAMNTMGFRSFEFIVIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISF 290 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 A F RF + +IF GL KAP IG++A GF V + S+G T VV +I Sbjct: 291 AEFLRRFREAVDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAI 350 Query: 355 SIVIIIDSLFAIFYFAIGI 373 VI D+LF++ + GI Sbjct: 351 FWVIAFDALFSVILTSTGI 369 >gi|295690462|ref|YP_003594155.1| hypothetical protein Cseg_3097 [Caulobacter segnis ATCC 21756] gi|295432365|gb|ADG11537.1| protein of unknown function DUF140 [Caulobacter segnis ATCC 21756] Length = 386 Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 109/374 (29%), Positives = 200/374 (53%), Gaps = 15/374 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G +G+W + + + + A++ D+ DL+ + DT GA I+ Sbjct: 26 EQDGRPTAVLSGDWTARGLFDAGLRLAEALDGV---DNPTFDLTGVNRCDTAGAYAILRA 82 Query: 62 MEKYHGKIKLQGVSTH--IEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 ++ ++K + V + +L L++ ++K++ R + F+ L IG+ + Sbjct: 83 ADE---RLKPEDVKARHGVVRLLQLVAAA--IQVKSEPAVRP---SGFRALLERIGRGVF 134 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 +D+ S LG +++ G + + ++ G+ +P+V +F G Sbjct: 135 GLFSDAFSTMAFLGHLLTAVGRSIVDPRRIR--WAPIVALCERAGLDAMPIVATTTFFIG 192 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 AV+A GA L+ FGA+++S++L+ I +RE +L+TA+++AGRS S+ AEIGSMK+N+ Sbjct: 193 AVVALLGANMLTDFGAQVYSVELIGISVMREFNILITAILLAGRSASSFAAEIGSMKMNQ 252 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDA++ MG+D L+ PR AL++++P+LT +A + + G +V+W D+ F Sbjct: 253 EIDAMQVMGVDPYEALVLPRFAALLLTIPILTFVATIAGLAGGILVVWIVLDLSPNFFLQ 312 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 R + + GL KAP MA I + ++G VG +LG++VT VV +I +I+ Sbjct: 313 RIVDYVGPTHFWIGLSKAPVMAAVIAAIGCRQGMEVGQDVEALGRRVTAAVVHAIFAIIL 372 Query: 360 IDSLFAIFYFAIGI 373 ID++FA+ Y + I Sbjct: 373 IDAVFALIYMELDI 386 >gi|120554124|ref|YP_958475.1| hypothetical protein Maqu_1197 [Marinobacter aquaeolei VT8] gi|120323973|gb|ABM18288.1| protein of unknown function DUF140 [Marinobacter aquaeolei VT8] Length = 382 Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 118/371 (31%), Positives = 193/371 (52%), Gaps = 8/371 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +E G +F+G+W S + ++ + D S + +DT GA L++ Sbjct: 19 AEFGGHTLKFSGDWTLSHYSVLNRQTTALKPRAAACNP---DFSGLGRLDTAGASLMVKL 75 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + LQ EQ +LI + NQ N IGKK+ Sbjct: 76 LGSDALISALQRAELPDEQR-ALIQAV--AEAMNQPSAAVATVNPVVAFLAEIGKKVTTL 132 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 A +G + +++ + + ++ G++ +P+V L++F+ GAV Sbjct: 133 GQLVWLLAGFIGQTLGTLFYILPRPTRWR--ITPFVAALHDTGLNALPIVALLTFLVGAV 190 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A GA L FGA I+++DL++ LRE GVLL A+++AGR+ SA A+IG+MK+NEE+ Sbjct: 191 VAFLGATVLEDFGATIYTVDLVAFSFLREFGVLLAAILLAGRTASAFTAQIGAMKVNEEL 250 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DAIRT+GL+ V +L+ PR+ A++ SLP+LT + S ++G ++V DIP + F + Sbjct: 251 DAIRTLGLNPVELLVVPRVLAMMFSLPILTFIGMISGMVGGAVVCAVALDIPPSQFIAIV 310 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 L + GL KAP A I ++ EGF V + S+G+ T+ VVQSI +VI++D Sbjct: 311 ERDIALKHFLVGLGKAPVFAFLIAVIGCLEGFKVAGSAQSVGEHTTSSVVQSIFMVILLD 370 Query: 362 SLFAIFYFAIG 372 S+ A+F+ +G Sbjct: 371 SVAALFFMEMG 381 >gi|167647526|ref|YP_001685189.1| hypothetical protein Caul_3564 [Caulobacter sp. K31] gi|167349956|gb|ABZ72691.1| protein of unknown function DUF140 [Caulobacter sp. K31] Length = 371 Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 115/372 (30%), Positives = 197/372 (52%), Gaps = 15/372 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 G +G+W + + + + ++ A++ S D+ +DL ++ DT GA I+ Sbjct: 11 DHEGRKTVMLSGDWTARGMVDAGERLITALDGS---DAVDLDLRDLSRCDTAGAYAIIRA 67 Query: 62 MEKY--HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 + G IK ++ +L L+ + + + PQ+ F + L IG+ + Sbjct: 68 ADGRVSAGHIK---ANSRTLRLLQLVGDAIQVEPEAAPPQKGF-----QALLERIGRGVY 119 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 +D LG ++ G A + + ++ G+ +P+V + +F G Sbjct: 120 GLGDDLYGTLGFLGHLLVAIGRCIAKPSRIR--WAPVVALAERSGLDAIPIVAVTTFFIG 177 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 AV+A GA L+QFGA++F+++L+ I LRE +L+TA+++AGRS S+ AEIGSMK+N+ Sbjct: 178 AVVALLGANLLTQFGAQVFAVELIGISVLREFNILITAILLAGRSASSFAAEIGSMKMNQ 237 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDA++ MG+D L+ PR AL+I++PLLT +A + + G +V W D+ F Sbjct: 238 EIDAMQVMGVDPYEALVLPRFAALLITIPLLTFIATLAGLAGGMLVTWAVLDLSPTFFLQ 297 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 R + + + + GL KAP MA I + ++G VG SLG++VT VV +I +I Sbjct: 298 RMQDSVGVQHYWIGLSKAPVMAMVIAAIGCRQGMEVGNDVESLGRRVTAAVVHAIFAIIA 357 Query: 360 IDSLFAIFYFAI 371 ID++FA+ Y + Sbjct: 358 IDAVFALIYMEL 369 >gi|206575650|ref|YP_002235755.1| putative ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|206570494|gb|ACI12140.1| putative ABC transporter, permease protein [Klebsiella pneumoniae 342] Length = 382 Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 121/363 (33%), Positives = 201/363 (55%), Gaps = 8/363 (2%) Query: 12 AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM-EKYHGKIK 70 +G+W + + + V A+ + S+ AI DLS + +DT GA L++ M EK +++ Sbjct: 25 SGDWVLAHYAYL-EPAVSALQPQLLSN-AIFDLSQLGTLDTAGATLLVKLMGEKKVLELE 82 Query: 71 LQGVSTHIEQLFSLISFTHRKKIKNQ-KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 + IE+ ++ T R I+N P L +IGK + F + + Sbjct: 83 RIAPTLPIER--RVLLQTVRSAIQNYVTPPAQHQPGIVTELLANIGKSVESFWQNLVALI 140 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 +GL + ++ + SL+ + +G++ VP++ L++F+ GAVIA G+ Sbjct: 141 GFIGLTMEALFATLLRPAHWR--VTSLVANLQQIGLNAVPIIALLTFMVGAVIAFLGSTV 198 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 LS FGA IF++ L++ LRE VLL A+++AGR+ SA A+IG MK NEEIDAI+TMGL Sbjct: 199 LSTFGASIFTVQLVAFSFLREFAVLLAAILMAGRTASAFTAQIGLMKANEEIDAIQTMGL 258 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 + V +L+ PR+ AL+++LP++T + I+G +V DI +F + + + Sbjct: 259 NPVELLVLPRVLALLVALPMMTFIGMICGILGGIVVCALTLDISPTMFLTIMQNNVGFEH 318 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + G+IKAP A I I+ EGF V + S+G+ T VV SI +VI++D++ A+F+ Sbjct: 319 FWVGMIKAPVFAFLIAIIGCLEGFKVSGSAESVGEHTTASVVHSIFVVILLDAVAALFFM 378 Query: 370 AIG 372 +G Sbjct: 379 EMG 381 >gi|152992948|ref|YP_001358669.1| ABC transporter, permease [Sulfurovum sp. NBC37-1] gi|151424809|dbj|BAF72312.1| ABC transporter, permease [Sulfurovum sp. NBC37-1] Length = 367 Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 124/363 (34%), Positives = 190/363 (52%), Gaps = 28/363 (7%) Query: 13 GNWKSPEISEIADDVVMAINKSI-QSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK--I 69 G W + EI ++ K I S + DLS + D+ G L M + +K K + Sbjct: 21 GEWTLATVPEIEKEL-----KGIPMGKSVLWDLSGVEAFDSAGVLLFMEYYDKLKQKNAV 75 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQR--SFFYNSFKNLHYHIGKKIVKFINDSCS 127 +L G S ++++ L+ RK + + P+R SFF +GK + + D Sbjct: 76 ELVGYSESQKEMYDLL----RKHMIEKVPERKTSFFE--------ELGKSTLVVLGDIKD 123 Query: 128 QAHILGLVISNTGE--FCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 LG + F + + K ++ +++ G + + ++ L SF+ G VIA Q Sbjct: 124 LITFLGHLFFTLFNVLFHPRNIRIK----EMVYHIHHSGFNALMIIGLTSFLVGMVIAYQ 179 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 GA QL++FGA+IF +D + I +RE+G L+TA++IAGRSGSA AEIG+MKI EEI A+R Sbjct: 180 GAVQLAKFGADIFIVDTVGISMVRELGPLMTAIVIAGRSGSAYTAEIGAMKITEEIAAMR 239 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 TMG D L+ PRI+ALI++LPLL ++ I G + +I A F R + Sbjct: 240 TMGFDPYNFLVMPRIFALIVALPLLIFFSDIMGIFGGMVASQMELNISMAQFVDRLNEVL 299 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + + G+IK P A I + GF V ++ SLG + T VV SI +VI D+LF+ Sbjct: 300 EVKHYILGMIKGPVFAFVIAAIGCFRGFQVSDNTESLGLQTTASVVNSIFLVIAFDALFS 359 Query: 366 IFY 368 + Y Sbjct: 360 VIY 362 >gi|16126557|ref|NP_421121.1| ABC transporter permease [Caulobacter crescentus CB15] gi|221235339|ref|YP_002517776.1| ABC transporter permease protein [Caulobacter crescentus NA1000] gi|13423841|gb|AAK24289.1| ABC transporter, permease protein, putative [Caulobacter crescentus CB15] gi|220964512|gb|ACL95868.1| ABC transporter permease protein [Caulobacter crescentus NA1000] Length = 371 Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 114/379 (30%), Positives = 195/379 (51%), Gaps = 25/379 (6%) Query: 2 SENGITVFRFAGNWKS-------PEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG 54 ++G V AG+W + P ++E +D + ++ DL+ + DT G Sbjct: 11 EQDGGLVAVLAGDWTARGLFDAGPRLTEALED-----RRDLR-----FDLTGVNRCDTAG 60 Query: 55 AELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI 114 A I+ ++K + +Q+ L+ IK + PQR+ F L I Sbjct: 61 AYAIL---RAAGDRLKSDRIIAR-KQVLRLLELVG-AAIKVE-PQRAARPTGFYALLERI 114 Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 G+ + D LG ++ G S ++ + ++ G+ +P++ Sbjct: 115 GRGVFGLFADGYGTLVFLGHLLVALGRSIVSPHRIR--WAPIVALCERAGLDAMPIIATT 172 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 +F GAV+A GA L+ FGA++++++L+ I +RE +L+TA+++AGRS S+ AEIGS Sbjct: 173 TFFIGAVVALLGANMLTDFGAQVYAVELIGISVMREFNILITAILLAGRSASSFAAEIGS 232 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 MK+N+EIDA++ MG+D L+ PR AL++++PLLT +A + + G +V+W D+ Sbjct: 233 MKMNQEIDAMQVMGVDPYEALVLPRFAALLLTIPLLTFVATIAGLAGGILVVWSVLDLSP 292 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F R + + GL KAP MA I + ++G VG SLG++VT VV +I Sbjct: 293 TFFLQRIVDYVGATHFWIGLSKAPVMAMVIAAIGCRQGMEVGKDIESLGRRVTAAVVHAI 352 Query: 355 SIVIIIDSLFAIFYFAIGI 373 +I+ID++FA+ Y + I Sbjct: 353 FAIILIDAVFALIYMELDI 371 >gi|148925785|ref|ZP_01809473.1| putative ABC transport system permease protein [Campylobacter jejuni subsp. jejuni CG8486] gi|145845795|gb|EDK22886.1| putative ABC transport system permease protein [Campylobacter jejuni subsp. jejuni CG8486] Length = 369 Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 124/379 (32%), Positives = 195/379 (51%), Gaps = 24/379 (6%) Query: 7 TVFRFAGN-------WKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 T F+F N W I ++ +A+ IQS I D + IDT G + Sbjct: 3 TNFKFQNNTLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFL 59 Query: 60 YF---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF--FYNSFKNLHYHI 114 ++ + KI + +++ + LF L +++ K +K ++F ++ L + Sbjct: 60 ALENDLKDKNIKITKESLNSRFQILFELCEKNYQRLGKTKKSHKNFSEYFIDLGKLSLEL 119 Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 K ++KFIN + + L L + N F +F FL + + +P+VIL Sbjct: 120 LKILIKFINFTGAFFTSLFLCLKNPKNF-----RFIAFLYHIENSAF----KALPIVILT 170 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 + + G V+A Q A+QL+QFGA IF +DLM I RE+ L+ A++IAGRS S+ A+IG Sbjct: 171 ALLVGVVLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGV 230 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 MKI +EI A+ TMG ++ PR+ AL+I++PL+ +++ +IIG +V DI F Sbjct: 231 MKITDEIAAMNTMGFRSFEFIVIPRVMALVIAMPLIVAISDAISIIGGMMVAKLNLDISF 290 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 A F RF + +IF GL KAP IG++A GF V + S+G T VV +I Sbjct: 291 AEFLRRFREAVDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAI 350 Query: 355 SIVIIIDSLFAIFYFAIGI 373 VI D+LF++ + GI Sbjct: 351 FWVIAFDALFSVILTSTGI 369 >gi|285019443|ref|YP_003377154.1| ABC transporter permease [Xanthomonas albilineans GPE PC73] gi|283474661|emb|CBA17160.1| probable abc transporter permease protein [Xanthomonas albilineans] Length = 405 Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 129/370 (34%), Positives = 208/370 (56%), Gaps = 27/370 (7%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA-ELIMYFMEKYHGK 68 R G+W + + +A +V+ +S+ + + +D S I ++D+ G +LI Y + Sbjct: 55 RLTGSW-TLSTALVASEVL----RSMPAGTTGIDASGIAQLDSAGVLQLIRYATRNGIAQ 109 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN---SFKNLHYHI---GKKIVKFI 122 L H L S I + + + +P+R Y + + L Y + GK+IV + Sbjct: 110 ESLDFRQDH-RALVSTI-----EDVADDRPKRKRDYGFAAALERLGYTVHRNGKEIVALV 163 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 LG + + +F+ L S + M VG+ VP+V L+S++ GAVI Sbjct: 164 G-------FLGETLVKLMRLMHAPRRFR--LTSTVHHMEQVGLDAVPLVALLSYLVGAVI 214 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A G+ L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EEID Sbjct: 215 AFLGSTVLRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKAREEID 274 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 AI+T+GLD + +L+ PR+ AL++ LPLLT +A + + G V IP ++ +R H Sbjct: 275 AIQTLGLDPMDLLVIPRLLALLLMLPLLTFVAMIAGLAGGVTVGAFDLGIPPQMYLARMH 334 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + ++ GL KAP A AIG++ EG V + S+G++ T+ VVQ+IS+VIIID+ Sbjct: 335 DTIQIRHMLVGLAKAPIFAIAIGLIGCLEGLRVEGTAQSVGERTTSSVVQTISLVIIIDA 394 Query: 363 LFAIFYFAIG 372 + A+++ +G Sbjct: 395 IAALWFMKMG 404 >gi|85707661|ref|ZP_01038727.1| ABC-type transport system permease component [Erythrobacter sp. NAP1] gi|85689195|gb|EAQ29198.1| ABC-type transport system permease component [Erythrobacter sp. NAP1] Length = 370 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 112/331 (33%), Positives = 180/331 (54%), Gaps = 9/331 (2%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 VDLS + E+DT+GA ++ F H + G + ++L + P R+ Sbjct: 47 VDLSDVEEMDTVGAWVVCRF--ATHQSAAITGTTPSAKRLLEAVEAASSDV--EITPDRT 102 Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY 161 + + + +G+K+ + G ++ G F L + +RQM Sbjct: 103 PVW---ERVPLALGEKVYAARSGVYGVVGFFGQILIGFGSLLRHPSTFP--LKATVRQME 157 Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221 VGV+ +P++ L+SF+ G VIAQQGA QL+QFGAE +++L+ + LRE+GVL+TA+M+A Sbjct: 158 MVGVAALPIIGLMSFLIGIVIAQQGAVQLAQFGAETLTVNLVGRITLRELGVLMTAIMVA 217 Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281 GRSGSA A+IG+MK+ EE+DA+RT+G+ + L+ PRI A + +L A+ I+G Sbjct: 218 GRSGSAFAAQIGTMKLTEEVDAMRTIGISPIERLVIPRILACTFMMVVLGFYASIVGIVG 277 Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341 ++V IPF F R L +++ GL+KAP + + G V +S Sbjct: 278 GAVVGHLSLGIPFFTFLERIQEVVPLHDVWVGLVKAPVFGLIVALAGCYHGMQVKGNSEQ 337 Query: 342 LGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 +G + T VV +I VI++D+ FA+F+ IG Sbjct: 338 VGIRTTMAVVSAIFAVIVLDAFFAVFFTEIG 368 >gi|86152962|ref|ZP_01071167.1| ABC transporter, permease [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843847|gb|EAQ61057.1| ABC transporter, permease [Campylobacter jejuni subsp. jejuni HB93-13] Length = 369 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 122/379 (32%), Positives = 195/379 (51%), Gaps = 24/379 (6%) Query: 7 TVFRFAGN-------WKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 T F+F N W I ++ +A+ IQS I D + IDT G + Sbjct: 3 TNFKFQNNTLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFL 59 Query: 60 YF---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF--FYNSFKNLHYHI 114 ++ + KI +G+++ + LF L +++ K +K ++F ++ L + Sbjct: 60 ALENDLKDKNIKITKEGLNSRFQILFELCEKNYQRLGKTKKSHKNFSEYFIDLGKLSLEL 119 Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 K ++KFIN + + L L + N F +F FL + + +P+VIL Sbjct: 120 LKILIKFINFTGAFFTSLFLCLKNPKNF-----RFIAFLYHIENSAF----KALPIVILT 170 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 + + G V+A Q A+QL+QFGA IF +DLM I RE+ L+ A++IAGRS S+ A+IG Sbjct: 171 ALLVGVVLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGV 230 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 MKI +EI A+ TMG ++ PR+ AL++++PL+ +++ +IIG ++ DI F Sbjct: 231 MKITDEIAAMNTMGFRSFEFIVIPRVMALVVAMPLIVAISDAISIIGGMMIAKLNLDISF 290 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F RF + +IF GL KAP IG++A GF V + S+G T VV +I Sbjct: 291 VEFLRRFREAVDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAI 350 Query: 355 SIVIIIDSLFAIFYFAIGI 373 VI D+LF++ + GI Sbjct: 351 FWVIAFDALFSVVLTSAGI 369 >gi|170724242|ref|YP_001751930.1| hypothetical protein PputW619_5085 [Pseudomonas putida W619] gi|169762245|gb|ACA75561.1| protein of unknown function DUF140 [Pseudomonas putida W619] Length = 377 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 127/368 (34%), Positives = 201/368 (54%), Gaps = 15/368 (4%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDS-AIVDLSAITEIDTIGAELIMYFM--EKY 65 R AG+W + + D + Q D+ A+ DLS + ++DT GA L+ + E+ Sbjct: 20 LRIAGDWTLAHYASLKRD---SERLRTQYDADAVADLSQLGQLDTAGASLLAELLGSERL 76 Query: 66 -HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 H +L S + L ++ I ++P+R L IG+ + D Sbjct: 77 SHCTQELPDASRAL--LKNVYCSVQDYCIPVKEPERHVLI----LLLERIGRAVNTLWQD 130 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + +GL++ ++++ L ++ + G+ P+V L++F+ GAV+A Sbjct: 131 TLQLLGFIGLILETLLRRALQPHRWR--LTPVVSHIEQTGLDAAPIVALLTFLVGAVVAF 188 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 GA L+ FGA +F++DL++ LRE VLLTA+++AGR+ SA A+IGSMK NEEIDAI Sbjct: 189 LGATVLADFGATVFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAI 248 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 RT+GL+ + +L+ PR+ AL+ISLPLLT +A I+G ++V DI A+F S S Sbjct: 249 RTLGLNPIELLVVPRVLALLISLPLLTFVAMICGIVGGAVVCALSLDISPAMFLSLLQSD 308 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + + GL KAPF A I + EGF V + S+G T+ VVQSI +VI++D++ Sbjct: 309 IGVQHFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVLDAVA 368 Query: 365 AIFYFAIG 372 A+F +G Sbjct: 369 ALFCMEMG 376 >gi|292490603|ref|YP_003526042.1| hypothetical protein Nhal_0469 [Nitrosococcus halophilus Nc4] gi|291579198|gb|ADE13655.1| protein of unknown function DUF140 [Nitrosococcus halophilus Nc4] Length = 380 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 117/383 (30%), Positives = 199/383 (51%), Gaps = 34/383 (8%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI--VDLSAITEIDTIGAELIMY 60 + + R G W IS++ + ++ QS + VD S IT++DT GA L+ Sbjct: 20 DPATSTLRCLGTWTLYGISQLEQTLPLS-----QSHPPVHAVDASGITQMDTGGAWLLQR 74 Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 + E+ I +G+ ++L L+ + P + H+ + Sbjct: 75 LLADLEQQTRPIPCKGLGQEQQKLLRLVQGGSTSQQLTTAPPPGILERIGRLSWAHVEEA 134 Query: 118 I--VKFINDSC-----SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170 + + FI ++ S AH S +++ FL +L G++ +P+ Sbjct: 135 LSFLAFIGETLLYFLRSMAH-------------PSRIRWRPFLSNL----QTAGINALPI 177 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 V L+ F+ G V+A QG QL +GA IF ++L+++ +RE+ L+ A++IAGR+GSA A Sbjct: 178 VGLLIFLVGVVLAYQGGIQLRAYGANIFIVELVTLTMVRELAPLMAAIIIAGRTGSAFTA 237 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 +IG+M++ EEIDA+RT+G+ + L+ P+I+AL+++LPLLT+ A+ I G ++ Sbjct: 238 QIGTMQVTEEIDALRTLGIPPMEQLVLPKIFALVLALPLLTVFADMVGIFGGMVMSQALL 297 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 ++ F F R L++ G+ KAP A I V +GF VG + S+G+ TT V Sbjct: 298 EVEFREFAQRIPEVVPLSSFLIGVGKAPVFAVIIATVGCYQGFRVGGGAESVGRHTTTSV 357 Query: 351 VQSISIVIIIDSLFAIFYFAIGI 373 VQ+I +VII D+ F+I + +GI Sbjct: 358 VQAIFLVIIADATFSILFSWLGI 380 >gi|57168794|ref|ZP_00367925.1| conserved hypothetical integral membrane protein [Campylobacter coli RM2228] gi|57019841|gb|EAL56524.1| conserved hypothetical integral membrane protein [Campylobacter coli RM2228] Length = 371 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 124/371 (33%), Positives = 199/371 (53%), Gaps = 22/371 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIA-DDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM- 59 EN + +F G W +S+I D++ I+++ + I D S + EID G + Sbjct: 10 EENKVFIF---GIWDKTSVSKIKIKDLLSQISQT----NCIFDFSQLNEIDMAGVRFFLA 62 Query: 60 --YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF--FYNSFKNLHYHIG 115 + ++K I QG++T + LF L +++ + Q+ + +F F+ S L + + Sbjct: 63 LEHDLKKNDILILKQGLNTRFKSLFELCEKNYQRINEKQEKKFNFTDFFISLGILSFDLL 122 Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K + KFIN + + L L I N +++F FL + + +P+VIL + Sbjct: 123 KILQKFINFTGTFFTSLFLCIKN-----PKNFRFISFLYHIENSAF----KALPIVILTA 173 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 + G V+A Q A+QL+QFGA IF +DL+ I RE+ L+ A++IAGRS S+ A+IG M Sbjct: 174 LLVGVVLAYQAAYQLAQFGANIFIVDLVGISATRELAPLIAAIVIAGRSASSYTAQIGVM 233 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 KI +EI+A+ TMG +I PR+ AL+I++PL+ L++ +I+G +V DI F Sbjct: 234 KITDEINAMNTMGFRSFEFIIIPRVMALVIAMPLIVALSDAISILGGMVVAKINLDISFG 293 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F RF + +I GL KAP IG++A GF V + S+G T VV +I Sbjct: 294 EFLRRFREAVEMKHIIIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIF 353 Query: 356 IVIIIDSLFAI 366 VI D+LF++ Sbjct: 354 WVIAFDALFSV 364 >gi|305432464|ref|ZP_07401626.1| ABC superfamily ATP binding cassette transporter, ABC protein [Campylobacter coli JV20] gi|304444503|gb|EFM37154.1| ABC superfamily ATP binding cassette transporter, ABC protein [Campylobacter coli JV20] Length = 371 Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 125/371 (33%), Positives = 198/371 (53%), Gaps = 22/371 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIA-DDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM- 59 EN + +F G W +S+I D++ I+++ + I D S + EID G + Sbjct: 10 EENKVFIF---GIWDKTSVSKIKIKDLLSQISQT----NCIFDFSQLNEIDMAGVRFFLA 62 Query: 60 --YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF--FYNSFKNLHYHIG 115 + ++K I QG++T + LF L +++ + Q+ + +F F+ S L + + Sbjct: 63 LEHDLKKNDILILKQGLNTRFKSLFELCEKNYQRINEKQEKKFNFTDFFISLGILSFDLL 122 Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K + KFIN + + L L I N F +F FL + + +P+VIL + Sbjct: 123 KILQKFINFTGAFFTSLFLCIKNPKNF-----RFISFLYHIENSAF----KALPIVILTA 173 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 + G V+A Q A+QL+QFGA IF +DL+ I RE+ L+ A++IAGRS S+ A+IG M Sbjct: 174 LLVGVVLAYQAAYQLAQFGANIFIVDLVGISATRELAPLIAAIVIAGRSASSYTAQIGVM 233 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 KI +EI+A+ TMG +I PR+ AL+I++PL+ L++ +I+G +V DI F Sbjct: 234 KITDEINAMNTMGFRSFEFIIIPRVMALVIAMPLIVALSDAISILGGMVVAKINLDISFG 293 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F RF + +I GL KAP IG++A GF V + S+G T VV +I Sbjct: 294 EFLRRFREAVEMKHIIIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIF 353 Query: 356 IVIIIDSLFAI 366 VI D+LF++ Sbjct: 354 WVIAFDALFSV 364 >gi|283953736|ref|ZP_06371267.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 414] gi|283794777|gb|EFC33515.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 414] Length = 369 Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 123/382 (32%), Positives = 196/382 (51%), Gaps = 30/382 (7%) Query: 7 TVFRFAGN-------WKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 T FRF N W I ++ + + IQS I D + +IDT G + Sbjct: 3 TDFRFQNNTFFIFGIWDKASIYKLKIKDFLTL---IQSKEVIFDFKDLEKIDTAGVRFFL 59 Query: 60 YF---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF--FYNSFKNLHYHI 114 ++ + KI QG+++ LF L +++ K +K ++F ++ + L + Sbjct: 60 ALENDLKNKNIKITKQGLNSRFLTLFELCEKNYQRLNKTKKSHKNFSEYFINLGKLSLEL 119 Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---VPVV 171 K + +FIN + + L L + N F LI +Y++ S +P+V Sbjct: 120 LKILREFINFTGAFFTSLFLCLKNPKNF------------RLIAFLYHIENSAFKALPIV 167 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 IL + + G V+A Q A+QL+QFGA IF +DLM I RE+ L+ A++IAGRS S+ A+ Sbjct: 168 ILTALLVGVVLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQ 227 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 IG MKI +EI A+ TMG +I PR+ AL++++PL+ +++ +I+G ++ D Sbjct: 228 IGVMKITDEIAAMNTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISIVGGMMIAKLNLD 287 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 I FA F RF + +I GL+KAP IG++A GF V + S+G T VV Sbjct: 288 ISFAEFLRRFREAVDIKHILIGLVKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVV 347 Query: 352 QSISIVIIIDSLFAIFYFAIGI 373 +I VI D+LF++ + GI Sbjct: 348 NAIFWVIAFDALFSVVLTSAGI 369 >gi|255322244|ref|ZP_05363390.1| ABC transport system permease [Campylobacter showae RM3277] gi|255300617|gb|EET79888.1| ABC transport system permease [Campylobacter showae RM3277] Length = 378 Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 121/373 (32%), Positives = 194/373 (52%), Gaps = 33/373 (8%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK-- 70 NW ++I I S + + +++ I E+D A ++F + K Sbjct: 27 NNWNYKLPAQIWTQTAALIG-SKKFNKIVLNFKEIKELDYAAA---LFFKNTFLNACKNY 82 Query: 71 -LQGVSTHIEQLFSLISFTHRKKIK---NQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 L ++ H +++F+ I+ KIK + KP +N IGK + F C Sbjct: 83 ELVNLTPHAQKIFASINSEINPKIKQIIDAKPH--------ENPFSQIGKNLTAFFAGFC 134 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIR----QMYY--VGVSGVPVVILISFVTGA 180 + ++ TGEF K F+L IR Y+ G+ V +V L SF+ G Sbjct: 135 A-------FLNFTGEFLVKFSKI--FMLKNIRVKEILAYFEDAGIKSVFIVCLTSFLIGI 185 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A QG+ L FGA I +++M +L LREI L+ A+++AGR S+ A+IG MKI EE Sbjct: 186 VLAYQGSNLLESFGATIIIVEMMGLLTLREIAPLIAAIIVAGRLASSFTAQIGVMKITEE 245 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA++TMG D + L+ PR+ ALI+++PL+ LA+ + I G +V+ Y +I F + +R Sbjct: 246 IDAMKTMGFDPFKFLVLPRVIALIVAMPLIVFLADVAGIFGEMVVMENYLNISFDSYLAR 305 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 F + +++ GL KAPF I + GF +G ++ S+G T VV +I VI++ Sbjct: 306 FSQEVDIKHLYVGLFKAPFFGIVIAFIGCMRGFQIGGNTQSVGTYTTVSVVNAIFGVIMV 365 Query: 361 DSLFAIFYFAIGI 373 D+LF+I + +GI Sbjct: 366 DALFSIIFTQLGI 378 >gi|302382565|ref|YP_003818388.1| hypothetical protein Bresu_1453 [Brevundimonas subvibrioides ATCC 15264] gi|302193193|gb|ADL00765.1| protein of unknown function DUF140 [Brevundimonas subvibrioides ATCC 15264] Length = 372 Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 115/374 (30%), Positives = 198/374 (52%), Gaps = 14/374 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAIN-KSIQSDSAIVDLSAITEIDTIGAELIMY 60 + G +V R G+W + + A + ++ ++IQS VDLS + DT GA ++ Sbjct: 11 ATGGGSVLRLTGDWTTMSLGRTAARLSDGLSGRTIQS----VDLSGLGRFDTAGALALVQ 66 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 K Q +++ ++ RK + + Q S F + + + + Sbjct: 67 ASGLTLPKDAWQS-RPEAGRIYDMVETLERKSMPAPRRQASL-TRIFARMGHGVHDAAAE 124 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 F+ S A LG +++ TG + + + Q G+ +P++ + +F GA Sbjct: 125 FL---LSMA-FLGRLMAATGNAVRHPGAIR--WPAWVSQAERSGLDAMPIIAVTNFFIGA 178 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 VIA GA L+QFGA +F++DL+ + LRE+ VL+TA+++AGRS S+ AE+GSM++N+E Sbjct: 179 VIAFLGADLLTQFGAGVFAVDLIGVSILRELAVLITAILLAGRSASSFAAEVGSMRMNQE 238 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +DA++ MG+D + L+ PR+ A+++ +PLLT + + + G IV W + A F R Sbjct: 239 VDAMQVMGVDPFQALVIPRLAAMLVMVPLLTFVGMIAGLFGGLIVTWSQLALGPAFFLQR 298 Query: 301 FHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 T + ++ GL KAP A I + ++G AV SLG++VT VVQ+I +I Sbjct: 299 MVDTPDMFTHMLVGLSKAPVFAIVIAAIGCRQGLAVSGDVESLGRRVTAAVVQAIFAIIF 358 Query: 360 IDSLFAIFYFAIGI 373 +D++FA+ Y + I Sbjct: 359 LDAVFALIYLELDI 372 >gi|154706662|ref|YP_001424136.1| ABC transporter permease protein [Coxiella burnetii Dugway 5J108-111] gi|154355948|gb|ABS77410.1| ABC transporter permease protein [Coxiella burnetii Dugway 5J108-111] Length = 377 Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 117/368 (31%), Positives = 189/368 (51%), Gaps = 21/368 (5%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME--KYHGK-I 69 G+W +S + D + + K S+ I+ IT++D+ GA L + K GK I Sbjct: 24 GDWTVSHLSPLEDQLPLCAEK--LSEKVIIHADKITKMDSAGALLFYTLINHLKSLGKAI 81 Query: 70 KLQGVSTHIEQLFSLI----SFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 ++ G+S + + L LI F + ++ P + + + + + F+ + Sbjct: 82 EITGLSENAQSLLKLIGNESKFLRQPLPSSKTPGVVYLLGEWAVTKWRVLIDFLTFVGEV 141 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + A G +++ L R + G +P+V L+SF+ G V+ Q Sbjct: 142 ATTA--------GQGILKPQRIQWRAIL----RAIEETGYQALPIVALLSFLVGVVLTYQ 189 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A QL + A+IF +D+ LRE G L+TA++ AGR+ +A A+IG+MK+NEEIDA+ Sbjct: 190 IALQLDSYNADIFVVDITGAAILREFGPLITAIIAAGRTSTAFTAQIGTMKVNEEIDALN 249 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 TMG+ + L+ P+I ALIISL LLT+ A+ G+ I+ DI + F RFH Sbjct: 250 TMGVVPIEHLVLPKIIALIISLTLLTVWADIFGTFGSMIMAKSQLDIGYLAFLDRFHHAI 309 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + + GLIKAP I V +GF VG ++S+G+K T VQSI ++II D++F+ Sbjct: 310 AVRHYIAGLIKAPVFGLIIATVGCFQGFQVGASADSVGQKTTQSAVQSIFLIIIADAIFS 369 Query: 366 IFYFAIGI 373 + + GI Sbjct: 370 VIFSLRGI 377 >gi|126666401|ref|ZP_01737380.1| ABC transporter, permease protein, putative [Marinobacter sp. ELB17] gi|126629202|gb|EAZ99820.1| ABC transporter, permease protein, putative [Marinobacter sp. ELB17] Length = 387 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 115/364 (31%), Positives = 196/364 (53%), Gaps = 12/364 (3%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKL- 71 G+W P + V A S + + ++L + IDT GA L+ + ++ + L Sbjct: 31 GDWTLPYYHALYSSVTAAGQDSDRYQT--LNLQTLGRIDTAGAALLAELVGPHNLEQWLA 88 Query: 72 ---QGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 Q VS L S ++ + +Q+P + + L +G + + + Sbjct: 89 DNPQAVSRETAALLSAVA----TAMADQQPLPAPPGFTLSGLVRDVGAWVNELYQLVVTL 144 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G +I+ +++ + + + + G++ VP+V L++F+ GAV+A GA Sbjct: 145 IGFIGQIIAALAWTTLHPRRWR--MTAFVAAVQDTGLNAVPIVALLTFLVGAVVAFLGAT 202 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L+ FGA I++++L++ LRE GVLL A+++AGR+ S+ A+IG+MK+NEE+DA+RT+G Sbjct: 203 VLADFGATIYTVNLVAFSFLREFGVLLAAILLAGRTASSFTAQIGAMKVNEELDALRTLG 262 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 L + +L+ PR+ A+++SLPLLT + S ++G ++V DI F S L Sbjct: 263 LSPIELLVLPRVLAMMVSLPLLTFVGMISGMVGGALVCSMTLDITPTQFISIVSQDVALK 322 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 ++ GL KAP A I VA EGF V + S+G T+ VVQSI +VI+ DS+ A+F+ Sbjct: 323 HLLVGLSKAPIFAFLIAAVACLEGFKVSGSAQSVGVHTTSSVVQSIFMVILFDSIAALFF 382 Query: 369 FAIG 372 +G Sbjct: 383 MEMG 386 >gi|29654061|ref|NP_819753.1| ABC transporter permease [Coxiella burnetii RSA 493] gi|161830426|ref|YP_001596961.1| ABC transporter, permease protein [Coxiella burnetii RSA 331] gi|165924016|ref|ZP_02219848.1| ABC transporter, permease protein [Coxiella burnetii RSA 334] gi|212212807|ref|YP_002303743.1| ABC transporter permease protein [Coxiella burnetii CbuG_Q212] gi|29541327|gb|AAO90267.1| ABC transporter permease protein [Coxiella burnetii RSA 493] gi|161762293|gb|ABX77935.1| ABC transporter, permease protein [Coxiella burnetii RSA 331] gi|165916539|gb|EDR35143.1| ABC transporter, permease protein [Coxiella burnetii RSA 334] gi|212011217|gb|ACJ18598.1| ABC transporter permease protein [Coxiella burnetii CbuG_Q212] Length = 377 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 117/368 (31%), Positives = 189/368 (51%), Gaps = 21/368 (5%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME--KYHGK-I 69 G+W +S + D + + K S+ I+ IT++D+ GA L + K GK I Sbjct: 24 GDWTVSHLSPLEDQLPLYAEK--LSEKVIIHADKITKMDSAGALLFYTLINHLKSLGKAI 81 Query: 70 KLQGVSTHIEQLFSLI----SFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 ++ G+S + + L LI F + ++ P + + + + + F+ + Sbjct: 82 EITGLSENAQSLLKLIGNESKFLRQPLPSSKTPGVVYLLGEWAVTKWRVLIDFLTFVGEV 141 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + A G +++ L R + G +P+V L+SF+ G V+ Q Sbjct: 142 ATTA--------GQGILKPQRIQWRAIL----RAIEETGYQALPIVALLSFLVGVVLTYQ 189 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A QL + A+IF +D+ LRE G L+TA++ AGR+ +A A+IG+MK+NEEIDA+ Sbjct: 190 IALQLDSYNADIFVVDITGAAILREFGPLITAIIAAGRTSTAFTAQIGTMKVNEEIDALN 249 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 TMG+ + L+ P+I ALIISL LLT+ A+ G+ I+ DI + F RFH Sbjct: 250 TMGVVPIEHLVLPKIIALIISLTLLTVWADIFGTFGSMIMAKSQLDIGYLAFLDRFHHAI 309 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + + GLIKAP I V +GF VG ++S+G+K T VQSI ++II D++F+ Sbjct: 310 AVRHYIAGLIKAPVFGLIIATVGCFQGFQVGASADSVGQKTTQSAVQSIFLIIIADAIFS 369 Query: 366 IFYFAIGI 373 + + GI Sbjct: 370 VIFSLRGI 377 >gi|254450464|ref|ZP_05063901.1| ABC transporter, inner membrane subunit [Octadecabacter antarcticus 238] gi|198264870|gb|EDY89140.1| ABC transporter, inner membrane subunit [Octadecabacter antarcticus 238] Length = 376 Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 93/220 (42%), Positives = 145/220 (65%) Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 L +L+ VG VP+V L++F+ G V+A QG+ QL QFGAE+F +DL+++ LRE+G Sbjct: 156 LTALVHHCQEVGFKAVPIVALMAFLIGVVLAFQGSTQLKQFGAEVFIVDLIAVSILRELG 215 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 +LLT++++AGR+ SA A IGSMK+ EEIDA+R++GLD L PRI AL++ LP+L + Sbjct: 216 ILLTSIIVAGRTASAFTAAIGSMKMREEIDAMRSLGLDPAATLFVPRILALVLMLPILGL 275 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 +AN + G +I+ W I +F +R + ++++ G+IKAP A IG+V G Sbjct: 276 IANVMGLFGGAIMAWIDLGISPEMFMTRLVNGTDVSHLAAGMIKAPVFALIIGVVGCHAG 335 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 V ++ SLG+ ++ VV +I VI+ D++F+IF+ IG Sbjct: 336 MQVQSNAESLGRMTSSSVVAAIFAVIMADAVFSIFFAQIG 375 >gi|268678744|ref|YP_003303175.1| hypothetical protein Sdel_0102 [Sulfurospirillum deleyianum DSM 6946] gi|268616775|gb|ACZ11140.1| protein of unknown function DUF140 [Sulfurospirillum deleyianum DSM 6946] Length = 376 Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 111/334 (33%), Positives = 180/334 (53%), Gaps = 22/334 (6%) Query: 43 DLSAITEIDTIGAELIMYF---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 D S+I DT G L+++ +EK + ++ G S + LFS+ + ++ K + Sbjct: 50 DFSSIETFDTHGIMLLLHHIKKLEKEYCIVQTTGASDAFKTLFSICQTHYPHEVPRPKKE 109 Query: 100 R---SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156 R SF N + + K + F + + +H +G + FK + L Sbjct: 110 RMVLSFLENVGRTMMEGY-KTLASFFSFTGELSHAIGALF------------FKPANIRL 156 Query: 157 IRQMYYVGVSG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 +Y++ SG +P+++L SF+ G VIA QGA QL +FGA IF +++++I +RE+ Sbjct: 157 KATLYHIEQSGAGAIPIILLTSFLIGVVIAYQGASQLEKFGANIFIVEMITISAVRELAP 216 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 LLTA+++AGRS S+ A+IG MK+ +EIDA+ +MG L+ PR++ALIISLPLL Sbjct: 217 LLTAIVVAGRSASSYTAQIGVMKLTDEIDAMSSMGFSPWNFLVLPRLFALIISLPLLVFF 276 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 A+ + G ++ D+ F F R T L ++ GL+KAP C I + GF Sbjct: 277 ADVVSTFGGMVIASTRLDVSFVEFIDRIKETVALKHLVIGLVKAPIFGCIIATIGCFRGF 336 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + ++ S+GK T VV +I VI +D+L ++F Sbjct: 337 QITSNTESVGKYTTISVVNAIFWVIAMDALISVF 370 >gi|226942634|ref|YP_002797707.1| ABC transporter protein [Azotobacter vinelandii DJ] gi|226717561|gb|ACO76732.1| ABC transporter protein [Azotobacter vinelandii DJ] Length = 382 Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 116/368 (31%), Positives = 193/368 (52%), Gaps = 20/368 (5%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72 G+W + ++ A + D+ V L + +DT GA L++ + G +L Sbjct: 26 GDWTLQHYPRLKREIERA--RPRLDDACPVVLDGLGALDTAGAGLLVELL----GARRLT 79 Query: 73 GVSTHIEQLFSLISFTHRKKIK--------NQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 ++ QL + R ++P+RS + K+ HIG+ + Sbjct: 80 DIARWAPQLPAERQALLRTVAMAVAGAAGTEEEPERS----TLKDELAHIGRVVETLWEQ 135 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + +GL +S +++ + L+ + G+ VP+V L++F+ GAV+A Sbjct: 136 QRTLYGFIGLTLSTLLATLPRPRRWR--ITPLVAHIERTGLDAVPIVALLTFMVGAVVAF 193 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 GA L QFGA I++++L++ LRE GVLL A+++AGR+ SA A+IG+MK NEEIDAI Sbjct: 194 LGATVLGQFGATIYTVNLVAYSFLREFGVLLCAILMAGRTASAFAAQIGAMKANEEIDAI 253 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R +GLD + +L+ PR+ A++++LP+LT +A I+G V DI +F+ Sbjct: 254 RALGLDPIELLVLPRVLAMLLTLPILTFIAMLCGILGGLAVCVLALDISPVQYFAILEQE 313 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + + GL KAP A I ++ EGF + S+G++ T+ VVQSI +VI+ID+L Sbjct: 314 IPVNHYLVGLGKAPLFAFLIAVIGCLEGFKASGSAQSVGERTTSSVVQSIFMVILIDALA 373 Query: 365 AIFYFAIG 372 A+F +G Sbjct: 374 ALFLMEMG 381 >gi|238796784|ref|ZP_04640289.1| ABC transporter, permease protein [Yersinia mollaretii ATCC 43969] gi|238719272|gb|EEQ11083.1| ABC transporter, permease protein [Yersinia mollaretii ATCC 43969] Length = 381 Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 109/286 (38%), Positives = 166/286 (58%), Gaps = 3/286 (1%) Query: 88 THRKKIKNQKPQRSFFYNSF-KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASS 146 T + + + P+ S F L +IG+ +V D S +GL + Sbjct: 97 TVSRVLPDLSPEPSTKAPPFWLELLSNIGRSMVNLWEDIKSLLGFIGLTLEALLGTLFRP 156 Query: 147 YKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206 +++ + SLI + +G++ VP+++L++F+ GAVIA GA L+ FGA IF++DL+ Sbjct: 157 ARWR--MTSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTTFGAGIFTVDLVVFS 214 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 LRE VLLTA+++AGR+ SA AEIG MK NEEIDAI+T+GL+ V +L+ PR+ AL+IS Sbjct: 215 FLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPVELLVLPRVLALLIS 274 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326 LP+LT + I G +V DI +F S ++ L + G+ KAP A I I Sbjct: 275 LPMLTFIGMVCGIFGGMVVCALTLDISPTMFLSIMQNSNGLQHFLVGISKAPIFAFLIAI 334 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 + EGF V + S+G TT VV SI +VI++D++ A+F+ +G Sbjct: 335 IGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEMG 380 >gi|238754554|ref|ZP_04615908.1| ABC transporter, permease protein [Yersinia ruckeri ATCC 29473] gi|238707185|gb|EEP99548.1| ABC transporter, permease protein [Yersinia ruckeri ATCC 29473] Length = 343 Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 121/340 (35%), Positives = 184/340 (54%), Gaps = 22/340 (6%) Query: 43 DLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHR-------KKIKN 95 DLS + +DT GA L+ + G ++ +H+ +L L+ R + + N Sbjct: 15 DLSQLGRLDTAGATLLATLL----GGERI----SHLRELAPLLPDERRILLETVSQVLPN 66 Query: 96 QKPQRSFFYNSFK-NLHYHIGKKIVKFINDSCSQAHILGLVISNT--GEFCASSYKFKGF 152 Q + F L IG+ + D S GL + F S ++ Sbjct: 67 LASQPTVKPPPFWIGLLVPIGQSVDNLWQDFKSLLGFTGLTLEALFGTVFRPSRWRMT-- 124 Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 SLI + +G++ VP+++L++F+ GAVIA GA L+ FGA IF++DL+ LRE Sbjct: 125 --SLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTTFGAGIFTVDLVVFSFLREFA 182 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 VLLTA+++AGR+ SA AEIG MK NEEIDAI+T+GL+ V +L+ PR+ AL+ISLP+LT Sbjct: 183 VLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPVELLVLPRVLALLISLPMLTF 242 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 + I G +V +I +F S ++ L + G+ KAP A I I+ EG Sbjct: 243 IGMVCGIFGGMVVCALALNISPTMFLSIMQNSNGLQHFLVGISKAPIFAFLIAIIGCLEG 302 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 F V + S+G TT VV SI +VI++D++ A+F+ +G Sbjct: 303 FKVSGSAESVGIHTTTSVVHSIFVVILLDAVAALFFMEMG 342 >gi|153209306|ref|ZP_01947341.1| ABC transporter, permease protein [Coxiella burnetii 'MSU Goat Q177'] gi|212219048|ref|YP_002305835.1| ABC transporter permease protein [Coxiella burnetii CbuK_Q154] gi|120575422|gb|EAX32046.1| ABC transporter, permease protein [Coxiella burnetii 'MSU Goat Q177'] gi|212013310|gb|ACJ20690.1| ABC transporter permease protein [Coxiella burnetii CbuK_Q154] Length = 377 Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 116/368 (31%), Positives = 188/368 (51%), Gaps = 21/368 (5%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME--KYHGK-I 69 G+W +S + D + + K S+ I+ I ++D+ GA L + K GK I Sbjct: 24 GDWTVSHLSPLEDQLPLYAEK--LSEKVIIHADKIIKMDSAGALLFYTLINHLKSLGKAI 81 Query: 70 KLQGVSTHIEQLFSLI----SFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 ++ G+S + + L LI F + ++ P + + + + + F+ + Sbjct: 82 EITGLSENAQSLLKLIGNESKFLRQPLPSSKTPGVVYLLGEWAVTKWRVLIDFLTFVGEV 141 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + A G +++ L R + G +P+V L+SF+ G V+ Q Sbjct: 142 ATTA--------GQGILKPQRIQWRAIL----RAIEETGYQALPIVALLSFLVGVVLTYQ 189 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A QL + A+IF +D+ LRE G L+TA++ AGR+ +A A+IG+MK+NEEIDA+ Sbjct: 190 IALQLDSYNADIFVVDITGAAILREFGPLITAIIAAGRTSTAFTAQIGTMKVNEEIDALN 249 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 TMG+ + L+ P+I ALIISL LLT+ A+ G+ I+ DI + F RFH Sbjct: 250 TMGVVPIEHLVLPKIIALIISLTLLTVWADIFGTFGSMIMAKSQLDIGYLAFLDRFHHAI 309 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + + GLIKAP I V +GF VG ++S+G+K T VQSI ++II D++F+ Sbjct: 310 AVRHYIAGLIKAPVFGLIIATVGCFQGFQVGASADSVGQKTTQSAVQSIFLIIIADAIFS 369 Query: 366 IFYFAIGI 373 + + GI Sbjct: 370 VIFSLRGI 377 >gi|327478710|gb|AEA82020.1| ABC transporter permease [Pseudomonas stutzeri DSM 4166] Length = 385 Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 118/367 (32%), Positives = 193/367 (52%), Gaps = 13/367 (3%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 R G+W + + +V + I S I +LS + +DT GA L++ + G Sbjct: 27 RIVGDWTLAHYAALRREV-QRLRARIDERSQI-ELSGLGALDTAGAGLLVELL----GPE 80 Query: 70 KLQGVSTHIEQL----FSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 ++ + QL +L+ T + S F + HIG+ + Sbjct: 81 RIAAIEAWAPQLPAERLALLR-TVATALDQPDAAESPRGYEFGYVLAHIGRTVAAVWKQQ 139 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + +GL + +++ L SL + G+ VP+V L++F+ GAV+A Sbjct: 140 RALLGFIGLTLQTLLLTLPRPRRWR--LTSLAVHIEQTGLDAVPIVALLTFLVGAVVAFL 197 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 GA L+ FGA I++++L+ LRE GVLL A+++AGRS SA A+IGSMK NEE+DAIR Sbjct: 198 GATVLADFGATIYTVNLVGFSFLREFGVLLAAILLAGRSASAFAAQIGSMKSNEEVDAIR 257 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 T+GL + +L+ PR+ A++I+LP+LT + S I G +V DI +FF+ Sbjct: 258 TLGLSPIELLVLPRVLAMLITLPILTFVGMLSGIAGGLVVCVLALDISPTMFFNIMARDI 317 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 +++ GL KAP A I ++ EGF V + S+G+ T+ VVQ+I +VI++D++ A Sbjct: 318 AVSHFLVGLGKAPVFAFVIAVIGCLEGFKVSGSAQSVGEHTTSSVVQAIFMVILLDAIAA 377 Query: 366 IFYFAIG 372 +F+ +G Sbjct: 378 LFFMEMG 384 >gi|167031179|ref|YP_001666410.1| hypothetical protein PputGB1_0158 [Pseudomonas putida GB-1] gi|166857667|gb|ABY96074.1| protein of unknown function DUF140 [Pseudomonas putida GB-1] Length = 377 Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 122/369 (33%), Positives = 198/369 (53%), Gaps = 17/369 (4%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G+W + + + + +D+ + DLS + +DT GA L+ + G Sbjct: 20 LRITGDWTLAHYANLKRESEQ-LRTQYAADT-VADLSQLGRLDTAGASLLAELL----GS 73 Query: 69 IKLQGVSTHIEQ-----LFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 +L + + + L ++ I ++P+R N L IG+ + Sbjct: 74 ERLSRCTQDLPEASRALLKNVYCSVQDYCIPVKEPER----NVLLMLLERIGRAVGTLWQ 129 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 DS +G+++ ++++ ++ + G+ P+V L++F+ GAV+A Sbjct: 130 DSMQLLGFVGVILETLLRRALQPHRWR--FTPVVAHIEQTGLDAAPIVALLTFLVGAVVA 187 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 GA L+ FGA IF++DL++ LRE VLLTA+++AGR+ SA A+IGSMK NEEIDA Sbjct: 188 FLGATVLADFGATIFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDA 247 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 IRT+GL+ + +L+ PR+ AL+ISLPLLT +A +IG ++V DI A+F S S Sbjct: 248 IRTLGLNPMELLVVPRVLALLISLPLLTFVAMICGMIGGAVVCALTLDISPAMFLSLLQS 307 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + + GL KAPF A I + EGF V + S+G T+ VVQSI +VI++D++ Sbjct: 308 DIGVQHFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVIVLDAV 367 Query: 364 FAIFYFAIG 372 A+F+ +G Sbjct: 368 AALFFMEMG 376 >gi|146280488|ref|YP_001170641.1| ABC transporter permease [Pseudomonas stutzeri A1501] gi|145568693|gb|ABP77799.1| probable permease of ABC transporter [Pseudomonas stutzeri A1501] Length = 362 Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 119/367 (32%), Positives = 192/367 (52%), Gaps = 13/367 (3%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 R G+W + + +V + I S I +LS + +DT GA L+ + G Sbjct: 4 RIVGDWTLAHYAALRREV-QRLRARIDERSQI-ELSGLGALDTAGAGLLAELL----GPE 57 Query: 70 KLQGVSTHIEQL----FSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 ++ + QL +L+ T + S F + HIG+ + Sbjct: 58 RIAAIEAWAPQLPAERLALLR-TVATALDQPDAAESPRGYEFGYVLAHIGRTVAAVWKQQ 116 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + +GL + +++ L SL + G+ VP+V L++F+ GAV+A Sbjct: 117 RALLGFIGLTLQTLLLTLPRPRRWR--LTSLAVHIEQTGLDAVPIVALLTFLVGAVVAFL 174 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 GA L+ FGA I++++L+ LRE GVLL A+++AGRS SA A+IGSMK NEEIDAIR Sbjct: 175 GATVLADFGATIYTVNLVGFSFLREFGVLLAAILLAGRSASAFAAQIGSMKSNEEIDAIR 234 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 T+GL + +L+ PR+ A++I+LP+LT + S I G +V DI +FF+ Sbjct: 235 TLGLSPIELLVLPRVLAMLITLPILTFVGMLSGIAGGLVVCVLALDISPTMFFNIMARDI 294 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 +++ GL KAP A I ++ EGF V + S+G+ T+ VVQ+I +VI++D++ A Sbjct: 295 AVSHFLVGLGKAPVFAFVIAVIGCLEGFKVTGSAQSVGEHTTSSVVQAIFMVILLDAIAA 354 Query: 366 IFYFAIG 372 +F+ +G Sbjct: 355 LFFMEMG 361 >gi|300917987|ref|ZP_07134613.1| conserved hypothetical protein [Escherichia coli MS 115-1] gi|300414813|gb|EFJ98123.1| conserved hypothetical protein [Escherichia coli MS 115-1] Length = 381 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 109/280 (38%), Positives = 162/280 (57%), Gaps = 11/280 (3%) Query: 95 NQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNT--GEFCASSYKFKGF 152 ++KP R F+ N G+ + D S +GL + F S ++ Sbjct: 110 SEKPTR-FWLEMLAN----TGRSVDNLWQDIKSLLGFIGLALETLLGTLFRPSRWRIT-- 162 Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 SLI + +G++ VP+++L++F+ GAVIA GA L+ FGA IF++DL+ LRE Sbjct: 163 --SLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTTFGAGIFTVDLVVFSFLREFA 220 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 VLLTA+++AGR+ SA AEIG MK NEEIDAI+T+GL+ V +L+ PR+ AL+ISLP+LT Sbjct: 221 VLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPVELLVLPRVLALLISLPMLTF 280 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 + I G +V DI +F S ++ L + G+ KAP A I I+ EG Sbjct: 281 IGMVCGIFGGMVVCALTLDISPTMFLSIMQNSNGLQHFLVGISKAPIFAFLIAIIGCLEG 340 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 F V + S+G TT VV SI +VI++D++ A+F+ +G Sbjct: 341 FKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEMG 380 >gi|119945392|ref|YP_943072.1| hypothetical protein Ping_1681 [Psychromonas ingrahamii 37] gi|119863996|gb|ABM03473.1| hypothetical protein DUF140 [Psychromonas ingrahamii 37] Length = 383 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 118/384 (30%), Positives = 200/384 (52%), Gaps = 28/384 (7%) Query: 2 SENGITVFRFAGNWKSPEISEI----ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAEL 57 + +G +FR G+W + + + + + N S+Q D +S + ++D+ G L Sbjct: 16 NNSGSILFRCQGDWTAKALQNVLRYLEKEAGILFNMSVQWD-----VSGVGKVDSAGIML 70 Query: 58 IMYF---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI 114 +++ ++ H ++L G + + L+ L+ R + Q + + +I Sbjct: 71 YIHYHDLLKLQHCTVELTGARSEYQNLYQLL----RSHVSQQAVSKPGLLSRLLLPFTNI 126 Query: 115 GK---KIVKFINDSCS--QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 GK + + IND + H L+ S SS ++ S+++ + GV +P Sbjct: 127 GKSTENLWRDINDFLTFIGEHSAALLTSLRH---PSSIRYA----SIVKNIEEAGVRALP 179 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +V L S + G VI Q A QL +FGA IF +D++ I RE+ L+TA+++AGR+GS+ Sbjct: 180 IVALTSCLIGVVITYQSALQLQKFGANIFIVDMIGISVTRELAPLITAIVVAGRTGSSYT 239 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A++G+M I EEI A+RTMG + R L+ PRI AL+I +PLL + A+ I G IV + Sbjct: 240 AQLGAMTITEEISAMRTMGFEPHRFLVLPRIIALMIVMPLLILFADVIGIAGGMIVSNIH 299 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 +I +A F R + +++ GL K PF A I I GF V ++ SLG+ T Sbjct: 300 LNISYAEFIHRLQHVLDIKHLWIGLFKGPFFAWLIAITGCFRGFQVASNTESLGRYTTIS 359 Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373 VV +I +VI D+LF++ + +G+ Sbjct: 360 VVNAIFLVIACDALFSVIFTELGL 383 >gi|325273982|ref|ZP_08140141.1| hypothetical protein G1E_12667 [Pseudomonas sp. TJI-51] gi|324100871|gb|EGB98558.1| hypothetical protein G1E_12667 [Pseudomonas sp. TJI-51] Length = 374 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 123/372 (33%), Positives = 198/372 (53%), Gaps = 25/372 (6%) Query: 16 KSPEISEIADDVVMAINKSIQSDS----------AIVDLSAITEIDTIGAELIMYFMEKY 65 + P IA D +A S++ DS + DLS + +DT GA L+ + Sbjct: 12 RQPACLRIAGDWTLAHYASLKRDSERLRAQYTPDTVADLSQLGRLDTAGASLLAELL--- 68 Query: 66 HGKIKLQGVSTHIEQ-----LFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 G +L + + + L ++ I ++P+R N L IG + Sbjct: 69 -GTERLSRCTHDLPEASRALLKNVYQSVQDYCIPVKEPER----NVLLLLLERIGCAVGT 123 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 DS +G+++ ++++ + ++ + G+ P+V L++F+ GA Sbjct: 124 LWQDSMQLLGFIGVILETLLRRALQPHRWR--ITPVVAHIEQTGLDAAPIVALLTFLVGA 181 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A GA L+ FGA +F++DL++ LRE VLLTA+++AGR+ SA A+IGSMK NEE Sbjct: 182 VVAFLGATVLADFGATVFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEE 241 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDAIRT+GL+ + +L+ PR+ AL+I+LPLLT +A I+G ++V I A+F S Sbjct: 242 IDAIRTLGLNPMELLVVPRVLALLITLPLLTFVAMLCGIVGGAVVCALSLGISPAMFLSL 301 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 S + + GL KAPF A I + EGF V + S+G T+ VVQSI +VI++ Sbjct: 302 LQSDIGVQHFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVIVL 361 Query: 361 DSLFAIFYFAIG 372 D++ A+F+ +G Sbjct: 362 DAVAALFFMEMG 373 >gi|238791990|ref|ZP_04635626.1| ABC transporter, permease protein [Yersinia intermedia ATCC 29909] gi|238728621|gb|EEQ20139.1| ABC transporter, permease protein [Yersinia intermedia ATCC 29909] Length = 381 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 109/280 (38%), Positives = 162/280 (57%), Gaps = 11/280 (3%) Query: 95 NQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNT--GEFCASSYKFKGF 152 ++KP R F+ N G+ + D S +GL + F S ++ Sbjct: 110 SEKPAR-FWLEMLAN----TGRSVDNLWQDIKSLLGFIGLALETLLGTLFRPSRWRIT-- 162 Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 SLI + +G++ VP+++L++F+ GAVIA GA L+ FGA IF++DL+ LRE Sbjct: 163 --SLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTTFGAGIFTVDLVVFSFLREFA 220 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 VLLTA+++AGR+ SA AEIG MK NEEIDAI+T+GL+ V +L+ PR+ AL+ISLP+LT Sbjct: 221 VLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPVELLVLPRVLALLISLPMLTF 280 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 + I G +V DI +F S ++ L + G+ KAP A I I+ EG Sbjct: 281 IGMVCGIFGGMVVCALTLDISPTMFLSIMQNSNGLQHFLVGISKAPIFAFLIAIIGCLEG 340 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 F V + S+G TT VV SI +VI++D++ A+F+ +G Sbjct: 341 FKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEMG 380 >gi|313496513|gb|ADR57879.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1] Length = 374 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 122/369 (33%), Positives = 198/369 (53%), Gaps = 17/369 (4%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G+W + + + + +D+ + DLS + +DT GA L+ + G Sbjct: 17 LRITGDWTLAHYASLKRES-ERLRSQCPADT-VADLSQLGRLDTAGASLLAELL----GS 70 Query: 69 IKLQGVSTHIEQ-----LFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 +L + + + L ++ I ++P+R N L IG+ + Sbjct: 71 ERLSRCTHALPEASQALLKNVYCSVQDYCIPVKEPER----NVLLLLLERIGRAVGTLWQ 126 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 DS +G+++ ++++ ++ + G+ P+V L++F+ GAV+A Sbjct: 127 DSMQLLGFVGVILETLLRRAFQPHRWR--FTPVVAHIEQTGLDAAPIVALLTFLVGAVVA 184 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 GA L+ FGA IF++DL++ LRE VLLTA+++AGR+ SA A+IGSMK NEEIDA Sbjct: 185 FLGATVLADFGATIFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDA 244 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 IRT+GL+ + +L+ PR+ AL+ISLPLLT +A I+G ++V DI A+F S S Sbjct: 245 IRTLGLNPMELLVVPRVLALLISLPLLTFVAMICGIVGGAVVCALTLDISPAMFLSLLQS 304 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + + GL KAPF A I + EGF V + S+G T+ VVQSI +VI++D++ Sbjct: 305 DIGVQHFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVIVLDAV 364 Query: 364 FAIFYFAIG 372 A+F+ +G Sbjct: 365 AALFFMEMG 373 >gi|238751983|ref|ZP_04613468.1| ABC transporter, permease protein [Yersinia rohdei ATCC 43380] gi|238709817|gb|EEQ02050.1| ABC transporter, permease protein [Yersinia rohdei ATCC 43380] Length = 381 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 97/218 (44%), Positives = 143/218 (65%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 SLI + +G++ VP+++L++F+ GAVIA GA L+ FGA IF++DL+ LRE VL Sbjct: 163 SLIANVQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTTFGAGIFTVDLVVFSFLREFAVL 222 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 LTA+++AGR+ SA AEIG MK NEEIDAI+T+GL+ V +L+ PR+ AL+ISLP+LT + Sbjct: 223 LTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPVELLVLPRVLALLISLPMLTFIG 282 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 I G +V +I +F S ++ L + G+ KAP A I I+ EGF Sbjct: 283 MVCGIFGGMVVCALELNISPTMFLSIMQNSNGLQHFLVGISKAPIFAFLIAIIGCLEGFK 342 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 V + S+G+ TT VVQSI +VI++D++ A+F+ +G Sbjct: 343 VTGSAESVGEHTTTSVVQSIFVVILLDAIAALFFMEMG 380 >gi|26986887|ref|NP_742312.1| hypothetical protein PP_0142 [Pseudomonas putida KT2440] gi|24981490|gb|AAN65776.1|AE016203_9 ABC transporter, permease protein, putative [Pseudomonas putida KT2440] Length = 377 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 122/369 (33%), Positives = 198/369 (53%), Gaps = 17/369 (4%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G+W + + + + +D+ + DLS + +DT GA L+ + G Sbjct: 20 LRITGDWTLAHYANLKRES-ERLRSHCPADT-VADLSQLGRLDTAGASLLAELL----GS 73 Query: 69 IKLQGVSTHIEQ-----LFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 +L + + + L ++ I ++P+R N L IG+ + Sbjct: 74 ERLSHCTHALPEASQALLKNVYCSVQDYCIPVKEPER----NVLLLLLERIGRAVGTLWQ 129 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 DS +G+++ ++++ ++ + G+ P+V L++F+ GAV+A Sbjct: 130 DSMQLLGFVGVILETLLRRAFQPHRWR--FTPVVAHIEQTGLDAAPIVALLTFLVGAVVA 187 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 GA L+ FGA IF++DL++ LRE VLLTA+++AGR+ SA A+IGSMK NEEIDA Sbjct: 188 FLGATVLADFGATIFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDA 247 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 IRT+GL+ + +L+ PR+ AL+ISLPLLT +A I+G ++V DI A+F S S Sbjct: 248 IRTLGLNPMELLVVPRVLALLISLPLLTFVAMICGIVGGAVVCALTLDISPAMFLSLLQS 307 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + + GL KAPF A I + EGF V + S+G T+ VVQSI +VI++D++ Sbjct: 308 DIGVQHFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVIVLDAV 367 Query: 364 FAIFYFAIG 372 A+F+ +G Sbjct: 368 AALFFMEMG 376 >gi|123441584|ref|YP_001005570.1| ABC transporter, membrane permease [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088545|emb|CAL11339.1| ABC transporter, membrane permease [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 381 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 109/281 (38%), Positives = 164/281 (58%), Gaps = 11/281 (3%) Query: 94 KNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISN--TGEFCASSYKFKG 151 ++KP SF+ N G+ + D S +GL + + F S ++ Sbjct: 109 SSEKPP-SFWLEFLAN----TGRSVDNLWQDIKSLLGFVGLTLEALFSTIFRPSRWR--- 160 Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211 + SLI + +G++ VP+++L++F+ GAVIA GA L+ FGA IF++DL+ LRE Sbjct: 161 -MTSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTTFGAGIFTVDLVVFSFLREF 219 Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271 VLLTA+++AGR+ SA AEIG MK NEEIDAI+T+GL+ V +L+ PR+ AL+ISLP+LT Sbjct: 220 AVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPVELLVLPRVLALLISLPMLT 279 Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 + I G +V DI +F S ++ L + G+ KAP A I I+ E Sbjct: 280 FIGMICGIFGGMVVCALALDISPTMFLSIMQNSNGLQHFLVGISKAPIFAFLIAIIGCLE 339 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 GF V + S+G TT VV SI +VI++D++ A+F+ +G Sbjct: 340 GFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEMG 380 >gi|330861182|emb|CBX71439.1| hypothetical protein YEW_CA08640 [Yersinia enterocolitica W22703] Length = 381 Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 109/281 (38%), Positives = 164/281 (58%), Gaps = 11/281 (3%) Query: 94 KNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISN--TGEFCASSYKFKG 151 ++KP SF+ N G+ + D S +GL + + F S ++ Sbjct: 109 SSEKPP-SFWLEFLAN----TGRSVDNLWQDIKSLLGFVGLTLEALFSTIFRPSRWR--- 160 Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211 + SLI + +G++ VP+++L++F+ GAVIA GA L+ FGA IF++DL+ LRE Sbjct: 161 -MTSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTTFGAGIFTVDLVVFSFLREF 219 Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271 VLLTA+++AGR+ SA AEIG MK NEEIDAI+T+GL+ V +L+ PR+ AL+ISLP+LT Sbjct: 220 AVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPVELLVLPRVLALLISLPMLT 279 Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 + I G +V DI +F S ++ L + G+ KAP A I I+ E Sbjct: 280 FIGMICGIFGGMVVCALALDISPTMFLSIMQNSNGLQHFLVGISKAPIFAFLIAIIGCLE 339 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 GF V + S+G TT VV SI +VI++D++ A+F+ +G Sbjct: 340 GFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEMG 380 >gi|332162490|ref|YP_004299067.1| ABC transporter, membrane permease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325666720|gb|ADZ43364.1| ABC transporter, membrane permease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 354 Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 109/281 (38%), Positives = 163/281 (58%), Gaps = 11/281 (3%) Query: 94 KNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISN--TGEFCASSYKFKG 151 ++KP SF+ N G+ + D S +GL + + F S ++ Sbjct: 82 SSEKPP-SFWLEFLAN----TGRSVDNLWQDIKSLLGFVGLTLEALFSTIFRPSRWRMT- 135 Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211 SLI + +G++ VP+++L++F+ GAVIA GA L+ FGA IF++DL+ LRE Sbjct: 136 ---SLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTTFGAGIFTVDLVVFSFLREF 192 Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271 VLLTA+++AGR+ SA AEIG MK NEEIDAI+T+GL+ V +L+ PR+ AL+ISLP+LT Sbjct: 193 AVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPVELLVLPRVLALLISLPMLT 252 Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 + I G +V DI +F S ++ L + G+ KAP A I I+ E Sbjct: 253 FIGMICGIFGGMVVCALALDISPTMFLSIMQNSNGLQHFLVGISKAPIFAFLIAIIGCLE 312 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 GF V + S+G TT VV SI +VI++D++ A+F+ +G Sbjct: 313 GFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEMG 353 >gi|223040212|ref|ZP_03610491.1| ABC transport system permease [Campylobacter rectus RM3267] gi|222878573|gb|EEF13675.1| ABC transport system permease [Campylobacter rectus RM3267] Length = 378 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 111/345 (32%), Positives = 182/345 (52%), Gaps = 26/345 (7%) Query: 38 DSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIK--- 94 D +++ + E+D A + + +L ++ H +++F+ I+ KIK Sbjct: 51 DKIVLNFKDVKELDYAAALFLKNTLLNARKNYELVNLTPHAQRIFASINSEVNPKIKQII 110 Query: 95 NQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLL 154 N KP +N IGK + + ++ TGEF K F+L Sbjct: 111 NAKPH--------ENPLSQIGKNLA-------AFFAGFCAFLNFTGEFLVKFSKI--FML 153 Query: 155 SLIR----QMYY--VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL 208 IR Y+ G+ V +V L SF+ G V+A QG+ L +FGA I +++M +L L Sbjct: 154 KNIRVKEILAYFEDAGIKSVFIVCLTSFLIGIVLAYQGSNLLERFGATIIIVEMMGLLTL 213 Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268 REI L+ A+++AGR S+ A+IG MKI EEIDA++TMG D + L+ PR+ ALI+++P Sbjct: 214 REIAPLIAAIIVAGRLASSFTAQIGVMKITEEIDAMKTMGFDPFKFLVLPRVIALIVAMP 273 Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328 L+ LA+ + I G +V+ Y +I F + +RF + +++ GL KAPF I + Sbjct: 274 LIVFLADVAGIFGEMVVMENYLNIGFDSYLARFEQEVEIKHLYVGLFKAPFFGVVIAFIG 333 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 GF + ++ S+G T VV +I VI++D+LF++ + +GI Sbjct: 334 CMRGFQISGNTQSVGTYTTVSVVNAIFGVIMVDALFSVIFTHLGI 378 >gi|139001578|dbj|BAF51698.1| putative innermembrane component of ABC transporter system [Sphingobium japonicum] Length = 316 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 88/218 (40%), Positives = 141/218 (64%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 +++++ VGVS + ++ L+SF+ G VIAQQG+ QL QFG E+ +I+L+ L RE+GVL Sbjct: 97 AVVQRFEVVGVSALGIIGLMSFLIGIVIAQQGSVQLRQFGMEMLTINLVGRLTFRELGVL 156 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA+M+AGRSGSA A++G+MK+ EE+DA+RT+G+ + L+ PR A+++ +PLL + Sbjct: 157 MTAIMVAGRSGSAFAAQLGTMKLTEEVDAMRTIGVSPMEALVLPRTLAVVVMMPLLGFYS 216 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 + AIIG + DIP F R + +++ GLIKAP I + +G Sbjct: 217 SIVAIIGGGFLCAVSLDIPPITFVQRLREVVPIHDLWVGLIKAPVFGVIIALAGCFQGMQ 276 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 V ++ +G + T VVQ+I +VI+ID+ FA+F+ +G Sbjct: 277 VKANAEEVGLRTTAAVVQAIFLVIVIDAFFAVFFTWVG 314 >gi|318606570|emb|CBY28068.1| ABC-type transport system involved in resistance to organic solvents, permease component USSDB6A [Yersinia enterocolitica subsp. palearctica Y11] Length = 354 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 109/281 (38%), Positives = 163/281 (58%), Gaps = 11/281 (3%) Query: 94 KNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISN--TGEFCASSYKFKG 151 ++KP SF+ N G+ + D S +GL + + F S ++ Sbjct: 82 SSEKPP-SFWLEFLAN----TGRSVDNLWQDIKSLLGFVGLTLEVLFSTIFRPSRWRMT- 135 Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211 SLI + +G++ VP+++L++F+ GAVIA GA L+ FGA IF++DL+ LRE Sbjct: 136 ---SLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTTFGAGIFTVDLVVFSFLREF 192 Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271 VLLTA+++AGR+ SA AEIG MK NEEIDAI+T+GL+ V +L+ PR+ AL+ISLP+LT Sbjct: 193 AVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPVELLVLPRVLALLISLPMLT 252 Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 + I G +V DI +F S ++ L + G+ KAP A I I+ E Sbjct: 253 FIGMICGIFGGMVVCALALDISPTMFLSIMQNSNGLQHFLVGISKAPIFAFLIAIIGCLE 312 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 GF V + S+G TT VV SI +VI++D++ A+F+ +G Sbjct: 313 GFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEMG 353 >gi|148545417|ref|YP_001265519.1| hypothetical protein Pput_0160 [Pseudomonas putida F1] gi|148509475|gb|ABQ76335.1| protein of unknown function DUF140 [Pseudomonas putida F1] Length = 377 Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 123/372 (33%), Positives = 199/372 (53%), Gaps = 23/372 (6%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSA---IVDLSAITEIDTIGAELIMYFMEKY 65 R G+W + + + ++ +++ A I DLS + +DT GA L+ + Sbjct: 20 LRITGDWTLAHYANLKRE-----SERLRTQCAANTIADLSQLGRLDTAGASLLAELL--- 71 Query: 66 HGKIKLQGVSTHIEQ-----LFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 G +L + + + L ++ I ++P+R N L IG + Sbjct: 72 -GSERLSRCTHALPEASQALLKNVYCSVQDYCIPVKEPER----NVLLLLLERIGCAVGT 126 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 DS +G+++ ++++ ++ + G+ P+V L++F+ GA Sbjct: 127 LWQDSMQLLGFVGVILETLLRRAFQPHRWR--FTPVVAHIEQTGLDAAPIVALLTFLVGA 184 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A GA L+ FGA IF++DL++ LRE VLLTA+++AGR+ SA A+IGSMK NEE Sbjct: 185 VVAFLGATVLADFGATIFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEE 244 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDAIRT+GL+ + +L+ PR+ AL+ISLPLLT +A I+G ++V DI A+F S Sbjct: 245 IDAIRTLGLNPMELLVVPRVLALLISLPLLTFVAMICGIVGGAVVCALTLDISPAMFLSL 304 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 S + + GL KAPF A I + EGF V + S+G T+ VVQSI +VI++ Sbjct: 305 LQSDIGVQHFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVIVL 364 Query: 361 DSLFAIFYFAIG 372 D++ A+F+ +G Sbjct: 365 DAVAALFFMEMG 376 >gi|121998618|ref|YP_001003405.1| hypothetical protein Hhal_1839 [Halorhodospira halophila SL1] gi|121590023|gb|ABM62603.1| protein of unknown function DUF140 [Halorhodospira halophila SL1] Length = 376 Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 112/338 (33%), Positives = 182/338 (53%), Gaps = 16/338 (4%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKN--QKPQ 99 VDLSA+ +DT GA L+ + G +++ ++ +L S RK ++ + Sbjct: 47 VDLSALGRLDTAGATLLARLL----GAARVEALARSTPEL----SAERRKLLQAVAAASE 98 Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTG----EFCASSYK-FKGFLL 154 R+ + Y +G+ + H L I TG F A + ++ L Sbjct: 99 RARTAPEPRGDPYFLGQLTIGLGAQMTHAGHQLARAIGFTGLVIAAFAAGLLRPWRWRLA 158 Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 ++ RQ+ + + +P+V L++F GAVIA G L +FGA IF++DL++ LRE GV+ Sbjct: 159 AVSRQLQHTALEALPIVALLTFAVGAVIAVLGVTVLGRFGAGIFTVDLVAYAFLREFGVV 218 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 LTA+++AGRS SA A+IGSMK NEE+DA+R G + +L+ PR+ AL+I++PLL+ +A Sbjct: 219 LTAILLAGRSASAFTAQIGSMKANEELDAMRAQGFSPIEMLVIPRVVALLIAVPLLSFVA 278 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 + G +V D+P + +S ++++ GL KAP A I I+ EG Sbjct: 279 VVCGLAGGGLVTLLNVDVPAGRIIA-LYSDISVSHYLAGLAKAPIFAFVIAIIGCLEGIK 337 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 + S+G T+ VVQSI VII++++ A+ Y +G Sbjct: 338 CSASAQSVGTHTTSAVVQSIFWVIILNAVAALIYVELG 375 >gi|238764189|ref|ZP_04625142.1| ABC transporter, permease protein [Yersinia kristensenii ATCC 33638] gi|238697602|gb|EEP90366.1| ABC transporter, permease protein [Yersinia kristensenii ATCC 33638] Length = 381 Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 96/218 (44%), Positives = 141/218 (64%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 SLI + +G++ VP+++L++F+ GAVIA GA L+ FGA IF++DL+ LRE VL Sbjct: 163 SLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTTFGAGIFTVDLVVFSFLREFAVL 222 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 LTA+++AGR+ SA AEIG MK NEEIDAI+T+GL+ V +L+ PR+ AL++SLP+LT + Sbjct: 223 LTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPVELLVLPRVLALLVSLPMLTFIG 282 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 I G +V DI +F S ++ L + G+ KAP A I I+ EGF Sbjct: 283 MVCGIFGGMVVCALTLDISPTMFLSIMQNSNGLQHFLVGISKAPIFAFLIAIIGCLEGFK 342 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 V + S+G TT VV SI +VI++D++ A+F+ +G Sbjct: 343 VTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEMG 380 >gi|104779408|ref|YP_605906.1| ABC transporter permease [Pseudomonas entomophila L48] gi|95108395|emb|CAK13089.1| putative ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 374 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 124/374 (33%), Positives = 200/374 (53%), Gaps = 13/374 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++ T AG+W + + + S D VDLS + +DT GA L+ Sbjct: 10 TQQQPTRLHIAGDWTLAHYASLKRECERL--GSQYGDDTQVDLSQLGRLDTAGASLLAEL 67 Query: 62 M--EKY-HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + E+ H L S + L ++ I ++P++ L IG+ + Sbjct: 68 LGSERLSHCTDDLPDASRAL--LKNVYCSVQDYCIPVKQPEQPVLLL----LLARIGRAV 121 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + D+ +GL++ ++++ + ++ + G+ P+V L++F+ Sbjct: 122 DQLWQDTRQVLGFIGLILETLLLRLFQPHRWR--VTPVVAHLEQTGLDAAPIVALLTFLV 179 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GAV+A GA L+ FGA IF++DL++ LRE VLLTA+++AGR+ SA A+IGSMK N Sbjct: 180 GAVVAFLGATVLAAFGATIFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKAN 239 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDAIRT+GL+ + +L+ PR+ AL+I+LPLLT LA ++G ++V DI A+F Sbjct: 240 EEIDAIRTLGLNPIELLVVPRVLALLIALPLLTFLAMLCGLVGGAVVCALTLDISPAMFL 299 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 S S + + GL KAPF A I + EGF V + S+G T+ VVQSI +VI Sbjct: 300 SLLQSDIGVQHFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVI 359 Query: 359 IIDSLFAIFYFAIG 372 ++D++ A+F+ +G Sbjct: 360 VLDAVAALFFMEMG 373 >gi|238789963|ref|ZP_04633742.1| ABC transporter, permease protein [Yersinia frederiksenii ATCC 33641] gi|238721911|gb|EEQ13572.1| ABC transporter, permease protein [Yersinia frederiksenii ATCC 33641] Length = 381 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 112/306 (36%), Positives = 173/306 (56%), Gaps = 7/306 (2%) Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF-KNLHYHIGKKIVKFINDSCSQ 128 KL+ ++ + Q ++ T + +P+ S SF L + G+ + D S Sbjct: 79 KLRELAPKLPQERRVLLETVSHVLPGLEPESSEKPPSFWLELLANTGRSMDNLWQDIKSL 138 Query: 129 AHILGLVISNT--GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 +GL + F S ++ SLI + +G++ VP+++L++F+ GAVIA G Sbjct: 139 LGFVGLTLEALFGTVFRPSRWRVT----SLIANVQQIGLNAVPIIMLLTFLVGAVIAFLG 194 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A L+ FGA IF++DL+ LRE VLLTA+++AGR+ SA AEIG MK NEEIDAI+T Sbjct: 195 ATVLTTFGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQT 254 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +GL+ V +L+ PR+ AL+ISLP+LT + I G +V +I +F S ++ Sbjct: 255 LGLNPVELLVLPRVLALLISLPMLTFIGMVCGIFGGMVVCALTLNISPTMFLSIMQNSNG 314 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L + G+ KAP A I I+ EGF V + S+G TT VV SI +VI++D++ A+ Sbjct: 315 LQHFLVGISKAPIFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAAL 374 Query: 367 FYFAIG 372 F+ +G Sbjct: 375 FFMEMG 380 >gi|116051201|ref|YP_789968.1| putative permease of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|218890596|ref|YP_002439460.1| putative permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254236173|ref|ZP_04929496.1| hypothetical protein PACG_02138 [Pseudomonas aeruginosa C3719] gi|254241899|ref|ZP_04935221.1| hypothetical protein PA2G_02620 [Pseudomonas aeruginosa 2192] gi|115586422|gb|ABJ12437.1| putative permease of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|126168104|gb|EAZ53615.1| hypothetical protein PACG_02138 [Pseudomonas aeruginosa C3719] gi|126195277|gb|EAZ59340.1| hypothetical protein PA2G_02620 [Pseudomonas aeruginosa 2192] gi|218770819|emb|CAW26584.1| probable permease of ABC transporter [Pseudomonas aeruginosa LESB58] Length = 381 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 92/218 (42%), Positives = 138/218 (63%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 L+ + G+ VP++ L++F+ GAVIA GA L+ FGA I++++L+ LRE VL Sbjct: 163 PLVANIEKSGLDAVPIIALLTFLVGAVIAFLGATVLANFGATIYTVNLVVFSFLREFAVL 222 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 LTA+++AGR+ SA A+IGSMK NEEIDAIR +GL+ + +L+ PR+ AL++SLP+LT + Sbjct: 223 LTAILMAGRTASAFTAQIGSMKANEEIDAIRALGLNPIELLVLPRVLALLVSLPMLTFVG 282 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 I+G V DIP A+F S + + G+ KAP A I ++ EGF Sbjct: 283 MLCGIVGGMTVCAWTLDIPPAMFLSIMEDGIGVQHFLVGISKAPLFAFLIAVIGCLEGFK 342 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 V + S+G+ TT VV SI +VI++D+L A+F+ +G Sbjct: 343 VSGSAQSVGEHTTTSVVHSIFVVILLDALAALFFMEMG 380 >gi|313108528|ref|ZP_07794529.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016] gi|310881031|gb|EFQ39625.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016] Length = 343 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 92/218 (42%), Positives = 138/218 (63%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 L+ + G+ VP++ L++F+ GAVIA GA L+ FGA I++++L+ LRE VL Sbjct: 125 PLVANIEKSGLDAVPIIALLTFLVGAVIAFLGATVLANFGATIYTVNLVVFSFLREFAVL 184 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 LTA+++AGR+ SA A+IGSMK NEEIDAIR +GL+ + +L+ PR+ AL++SLP+LT + Sbjct: 185 LTAILMAGRTASAFTAQIGSMKANEEIDAIRALGLNPIELLVLPRVLALLVSLPMLTFVG 244 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 I+G V DIP A+F S + + G+ KAP A I ++ EGF Sbjct: 245 MLCGIVGGMTVCAWTLDIPPAMFLSIMEDGIGVQHFLVGISKAPLFAFLIAVIGCLEGFK 304 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 V + S+G+ TT VV SI +VI++D+L A+F+ +G Sbjct: 305 VSGSAQSVGEHTTTSVVHSIFVVILLDALAALFFMEMG 342 >gi|152984282|ref|YP_001347296.1| ABC transporter permease [Pseudomonas aeruginosa PA7] gi|150959440|gb|ABR81465.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7] Length = 381 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 92/218 (42%), Positives = 138/218 (63%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 L+ + G+ VP++ L++F+ GAVIA GA L+ FGA I++++L+ LRE VL Sbjct: 163 PLVANIEKSGLDAVPIIALLTFLVGAVIAFLGATVLANFGATIYTVNLVVFSFLREFAVL 222 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 LTA+++AGR+ SA A+IGSMK NEEIDAIR +GL+ + +L+ PR+ AL++SLP+LT + Sbjct: 223 LTAILMAGRTASAFTAQIGSMKANEEIDAIRALGLNPIELLVLPRVLALLVSLPMLTFVG 282 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 I+G V DIP A+F S + + G+ KAP A I ++ EGF Sbjct: 283 MLCGIVGGMTVCAWSLDIPPAMFLSIMEDGIGVQHFLVGISKAPLFAFLIAVIGCLEGFK 342 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 V + S+G+ TT VV SI +VI++D+L A+F+ +G Sbjct: 343 VSGSAQSVGEHTTTSVVHSIFVVILLDALAALFFMEMG 380 >gi|107102741|ref|ZP_01366659.1| hypothetical protein PaerPA_01003808 [Pseudomonas aeruginosa PACS2] Length = 372 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 92/218 (42%), Positives = 138/218 (63%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 L+ + G+ VP++ L++F+ GAVIA GA L+ FGA I++++L+ LRE VL Sbjct: 154 PLVANIEKSGLDAVPIIALLTFLVGAVIAFLGATVLANFGATIYTVNLVVFSFLREFAVL 213 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 LTA+++AGR+ SA A+IGSMK NEEIDAIR +GL+ + +L+ PR+ AL++SLP+LT + Sbjct: 214 LTAILMAGRTASAFTAQIGSMKANEEIDAIRALGLNPIELLVLPRVLALLVSLPMLTFVG 273 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 I+G V DIP A+F S + + G+ KAP A I ++ EGF Sbjct: 274 MLCGIVGGMTVCAWTLDIPPAMFLSIMEDGIGVQHFLVGISKAPLFAFLIAVIGCLEGFK 333 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 V + S+G+ TT VV SI +VI++D+L A+F+ +G Sbjct: 334 VSGSAQSVGEHTTTSVVHSIFVVILLDALAALFFMEMG 371 >gi|222823161|ref|YP_002574734.1| ABC transporter permease (DUF140 domain protein) [Campylobacter lari RM2100] gi|222538382|gb|ACM63483.1| putative ABC transporter, permease protein (DUF140 domain protein) [Campylobacter lari RM2100] Length = 370 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 123/377 (32%), Positives = 196/377 (51%), Gaps = 34/377 (9%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +N +F G W + ++ + + K+I I D + + IDT G I YF+ Sbjct: 10 KNHECIFSVFGIWDKTSVGKL-EKLDFPTQKNI-----IFDFTNLDFIDTAG---IRYFL 60 Query: 63 EKYHGKIKLQG-------VSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIG 115 ++K +G + + +LF L H K + + + F+NL G Sbjct: 61 A-LENELKQKGFELSRVNLKSEHAKLFELCQ-KHYKSFCDSYEDKKTIKDFFENL----G 114 Query: 116 KKIVKFINDSCSQAHILGLVISNTGE--FCASSYKFKGFLLSLIRQMYYV---GVSGVPV 170 KK+V+ + +GL+I+ F +F+ FL Y+V ++ +P+ Sbjct: 115 KKVVESFTLLVQFLNFIGLIIATCFNTLFHLKKLRFRAFL-------YHVENSAINALPI 167 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 ++L S + G V+A Q A+QL+QFGA I+ +DLM I RE+ L++A++IAGRS S+ A Sbjct: 168 IMLTSLLVGVVLAYQAAYQLAQFGANIYIVDLMGISATRELAPLISAIVIAGRSASSYTA 227 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 +IG MK+ +EIDA++TMG +I PR+ AL +++PL+ I+A+ +IIG IV W Sbjct: 228 QIGVMKLTDEIDAMKTMGFKESEFIILPRVLALALAMPLVVIVADILSIIGGIIVAWFSL 287 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 +I + F SRF L +I GLIKAP I +A GF V + S+G T V Sbjct: 288 EISASEFMSRFKEAVELKHIIIGLIKAPIFGFLIASIACFRGFFVQKTTESIGVYTTKSV 347 Query: 351 VQSISIVIIIDSLFAIF 367 V +I VI D++F++F Sbjct: 348 VNAIFWVIAFDAIFSVF 364 >gi|296388302|ref|ZP_06877777.1| ABC transporter permease [Pseudomonas aeruginosa PAb1] Length = 343 Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 92/218 (42%), Positives = 138/218 (63%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 L+ + G+ VP++ L++F+ GAVIA GA L+ FGA I++++L+ LRE VL Sbjct: 125 PLVANIEKSGLDAVPIIALLTFLVGAVIAFLGATVLANFGATIYTVNLVVFSFLREFAVL 184 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 LTA+++AGR+ SA A+IGSMK NEEIDAIR +GL+ + +L+ PR+ AL++SLP+LT + Sbjct: 185 LTAILMAGRTASAFTAQIGSMKANEEIDAIRALGLNPIELLVLPRVLALLVSLPMLTFVG 244 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 I+G V DIP A+F S + + G+ KAP A I ++ EGF Sbjct: 245 MLCGIVGGMTVCAWTLDIPPAMFLSIMEDGIGVQHFLVGISKAPLFAFLIAVIGCLEGFK 304 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 V + S+G+ TT VV SI +VI++D+L A+F+ +G Sbjct: 305 VSGSAQSVGEHTTTSVVHSIFVVILLDALAALFFMEMG 342 >gi|224371971|ref|YP_002606137.1| ABC-type transporter, permease protein [Desulfobacterium autotrophicum HRM2] gi|223694690|gb|ACN17973.1| ABC-type transporter, permease protein [Desulfobacterium autotrophicum HRM2] Length = 373 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 119/342 (34%), Positives = 182/342 (53%), Gaps = 22/342 (6%) Query: 41 IVDLSAITEIDTIGAELIMY----FMEKYHGKIKLQGVSTHIEQLFSL---ISFTHRKKI 93 ++DL + +D+ GA L+ + + ++ GKI + G+ +Q+ L I T + Sbjct: 45 VIDLKRVDHMDSAGAALVWFIKTTWKQRTGGKISVLGLKPAFKQVMDLTETIPDTRDGEK 104 Query: 94 KNQKPQRSFFYNSFKNLHYHIGKKIVKFIN--DSCSQAHILGLVISNTGEFCASSYKFKG 151 K +K SF KN + +K FI ++A I F S ++K Sbjct: 105 KPKKKPPSFVETRGKNFADQM-EKATSFIALVGQITRALIHAF-------FHPLSVRWKD 156 Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211 LL+ R GV+ +P+V LISF+ G V+A Q A + FGAEI+ +L+ I +RE+ Sbjct: 157 ALLTAERS----GVNALPIVALISFIVGLVMAFQAAMPMKMFGAEIYVANLIGIAMVREL 212 Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271 G L+TA+++AGRSGSA AEIG+MKINEEIDA+ TMGLD VR L+ PRI A + PLLT Sbjct: 213 GPLMTAIILAGRSGSAFAAEIGTMKINEEIDALSTMGLDPVRFLMVPRILAAVFITPLLT 272 Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 I +NF I+G SIV+ P ++S+ S T + GL+K I Sbjct: 273 IFSNFVGIMGGSIVLLS-MGYPAITYYSQVISFVTWIDFTGGLVKCFVFGILISAAGCIR 331 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 G ++G T+ VV I+++ + D +F++ ++ +GI Sbjct: 332 GIETQSGPGAVGASTTSAVVTGITLIAVFDGIFSVLFYCLGI 373 >gi|28974221|gb|AAO64222.1| putative ABC transport system permease protein Cf0016 [Campylobacter fetus] Length = 367 Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 110/343 (32%), Positives = 181/343 (52%), Gaps = 19/343 (5%) Query: 33 KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKK 92 +S++ D+ +DL + ID A F K++ KL + +++F+L+S + Sbjct: 42 RSLKVDT--LDLKNLIRIDYSAAT----FFAKHYNCPKLINSNDKFDKIFALVSDKYILN 95 Query: 93 IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSY--KFK 150 ++ K ++S NL IGK I+ N+ S LG + N + + + +FK Sbjct: 96 LQIIKFKKS-------NLIEQIGKNIINLKNELVSFCIFLGEFLFNLTKSLLNPFTVRFK 148 Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210 L Y G+S V +V L SF+ G V+A QGA L FGA I+ +D+M I+ LRE Sbjct: 149 ----ELSNHFYSAGISAVFIVCLTSFLIGIVLAYQGATMLENFGASIYVVDIMGIMTLRE 204 Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 +G L+ A+++AGRS S+ A+IG MKI +E++A++TMG + R ++ P + Sbjct: 205 VGPLIAAIVVAGRSASSYTAQIGVMKITDELEAMKTMGFEPFRFIVMPACFGSYFGYAFY 264 Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330 +I + G +V Y D+ F+ + RF S+ L + + GL KAPF I ++ K Sbjct: 265 SIFSKRGKYFGQMMVCNWYLDLSFSDYLERFRSSIALRHFWVGLFKAPFFGAVIALIGCK 324 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 GF V +NS+G+ T VV +I +I +D++F+I Y + I Sbjct: 325 RGFEVSGSTNSVGELTTRSVVNAIFWIIALDAIFSIIYTELKI 367 >gi|218658451|ref|ZP_03514381.1| probable ABC transporter, permease protein [Rhizobium etli IE4771] Length = 184 Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 89/155 (57%), Positives = 117/155 (75%) Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 ++MIAGRSGSAI AEIGSMK+ EEIDA++ MGL+ + +LI PR+ AL I+LPLLT+LANF Sbjct: 28 SIMIAGRSGSAITAEIGSMKMREEIDALKVMGLNPIGVLIFPRLVALTIALPLLTVLANF 87 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 +++ GA+ V W Y I FA F +R H TL+ + +G+IKAPFMA IGIVA EG VG Sbjct: 88 ASLAGAAAVAWGYSGITFANFLARLHEAVTLSTVLSGMIKAPFMALVIGIVAAVEGLKVG 147 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 + SLG+ VT VV++I +VI++D LFA+FY AI Sbjct: 148 GSAESLGQHVTASVVKAIFVVILMDGLFAMFYAAI 182 >gi|311694463|gb|ADP97336.1| ABC transporter, permease protein [marine bacterium HP15] Length = 388 Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 101/331 (30%), Positives = 181/331 (54%), Gaps = 3/331 (0%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 ++LS +T IDT GA + + ++ + + + S + + +KNQ Sbjct: 60 INLSGLTRIDTAGASQLASLIGPER-LLEAASADSELPRETSALIAAVCEAMKNQPEADR 118 Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY 161 + + G+K+ +G + ++++ + + ++ Sbjct: 119 RSPSLVWSFVTGTGQKVESIFRLLWILVGFIGQTLGTLAWNLPRPWRWR--MTPFVAAVH 176 Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221 G++ +P+V L++F+ GAV+A GA L FGA I++++L++ LRE GVLL A+++A Sbjct: 177 DTGLNALPIVALLTFLVGAVVAFLGATVLDDFGATIYTVNLVAFSFLREFGVLLAAILLA 236 Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281 GR+ SA A IG+MK+NEE+DAIRT+GL+ + +L+ PR+ A+++SLP+LT + S ++G Sbjct: 237 GRTASAFTAHIGAMKVNEELDAIRTLGLNPIELLVLPRVMAMMVSLPILTFVGMISGMVG 296 Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341 ++V DI F + L + G++KAP A I ++ EGF V + S Sbjct: 297 GAMVCALVLDITPTQFMAIVERDIALQHFVVGIVKAPIFAFLIAVIGCLEGFKVAGSAQS 356 Query: 342 LGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 +G+ T+ VVQSI +VI++DS+ A+F+ +G Sbjct: 357 VGEHTTSSVVQSIFMVILLDSIAALFFMEMG 387 >gi|157736379|ref|YP_001489062.1| ABC transporter, permease protein [Arcobacter butzleri RM4018] gi|157698233|gb|ABV66393.1| ABC transporter, permease protein [Arcobacter butzleri RM4018] Length = 370 Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 109/333 (32%), Positives = 180/333 (54%), Gaps = 12/333 (3%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYHGK-IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100 +D + + E D+ ++ F+ + K I + H E++F ++ K+ ++ ++ Sbjct: 49 IDFANLKECDSSAIIYLISFLNTFEEKNITILNNKNH-EKIFDFYKKHYQTKVL-EEEKK 106 Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 + F+ Y I K+ +FI + I F S +FK ++++ + Sbjct: 107 NLFFEDLGKKSYDIYKESKEFIGFIGKVFYFFIYAI-----FNPSKIRFK----AMLKYI 157 Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 + +V + SF+ G VIA QG+ QL +FGA IF ++++SI REI L+TA++I Sbjct: 158 ETSAFDALLIVAVTSFLVGVVIAYQGSVQLEKFGANIFIVEMISITIFREIAPLVTAIVI 217 Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280 AGRS S+ AEIG+MKI EEIDA++TM + L PRI+AL ISLPLL A+ + Sbjct: 218 AGRSASSYTAEIGAMKITEEIDAMKTMNFEPTLFLTLPRIFALCISLPLLVFFADIIGVF 277 Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 G ++ D+ F F +R H+ L ++ G+ KA F AI I+ GF V ++ Sbjct: 278 GGMVIASSSLDVTFIEFINRLHNEVPLKHLILGVFKALFFGFAIAIIGCYRGFQVQNNTT 337 Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 S+GK T VV +I +VI+ID++F++ + +GI Sbjct: 338 SIGKFTTMSVVNAIFVVILIDAVFSVIFTQMGI 370 >gi|329890329|ref|ZP_08268672.1| hypothetical protein BDIM_20300 [Brevundimonas diminuta ATCC 11568] gi|328845630|gb|EGF95194.1| hypothetical protein BDIM_20300 [Brevundimonas diminuta ATCC 11568] Length = 372 Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 111/378 (29%), Positives = 201/378 (53%), Gaps = 22/378 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAIN-KSIQSDSAIVDLSAITEIDTIGAELIMY 60 S++G T R AG+W + + + D + ++ +S+ + +DL + DT GA + Sbjct: 11 SQDGQTRLRLAGDWSTVAVGRMGDRLKAELDGRSVTA----LDLDDLGRFDTAGALAVAQ 66 Query: 61 FMEKYHGKIKLQGVSTHIE--QLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 M + I S E +L+ +++ + + P+RS +G+ + Sbjct: 67 AMSR---PIPESAWSVRPEAGRLYRMVA--KLDCMTAEPPRRS---APMTRGFAKVGRGV 118 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFL--LSLIRQMYYVGVSGVPVVILISF 176 F ++ LG +++ ++ K G + + Q G+ +P+V++ +F Sbjct: 119 YDFGAEAMLSLAFLGRLMAA----VLTTLKHPGRIRWAAWFSQAERTGLDAIPIVVVTNF 174 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 GAV+A G L+QFGA +F++ L+ + RE V++TAV++AGRS S+ AEIGSM+ Sbjct: 175 FIGAVVAFIGVDLLTQFGAGVFTVQLIGVAVFREFAVVITAVLLAGRSASSFAAEIGSMR 234 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 + +E+DA++ MG+D + L+ PR+ AL++ LPLLT LA ++G +V W ++ A Sbjct: 235 MTQEVDAMKVMGVDPFQALVIPRLAALLVMLPLLTFLAMVGGLLGGVLVAWSQLNLGPAF 294 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 FF R + ++ GLIKAP A + + ++G +V SLG++VT VVQ+I Sbjct: 295 FFQRLVEDGYMPTHMMVGLIKAPVFALVVAAIGCRQGMSVAGDVESLGRRVTAAVVQAIF 354 Query: 356 IVIIIDSLFAIFYFAIGI 373 +I++D++FA+ + + I Sbjct: 355 AIILLDAVFALIFIELKI 372 >gi|220934666|ref|YP_002513565.1| protein of unknown function DUF140 [Thioalkalivibrio sp. HL-EbGR7] gi|219995976|gb|ACL72578.1| protein of unknown function DUF140 [Thioalkalivibrio sp. HL-EbGR7] Length = 375 Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 111/379 (29%), Positives = 197/379 (51%), Gaps = 23/379 (6%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMY 60 S G+ V R AG +S + + + + ++S + VD S + D G L++ Sbjct: 13 SPKGV-VLRLAGRLDVHTVSTVWGEALAGLK--VRSGRPVRVDTSGVDYCDGAGVALVVD 69 Query: 61 FMEKYHGKIKLQGVSTHIEQLFS-LISFTHRK-KIKNQKPQRSF-FYNSFKNLHYHIGKK 117 + + G+ E++ L+ F R + PQR N + +G+ Sbjct: 70 LLRQPRDPGAEVGLGETPEEVRRMLVPFDVRDFSGEAVPPQRGPGLKQHLANGMHDLGRY 129 Query: 118 I---VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 + V F+ ++ + F A+ + + + G + +P+V+LI Sbjct: 130 LYLQVAFVGEATAAM------------FHAARHPRQVRWRDALNLAQEAGANALPIVMLI 177 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 +F+ G ++A Q A + QFGAEIF +L+++ LRE+ L+TA+++AGRSG+A AEIG+ Sbjct: 178 AFLMGVILAFQSAVAMRQFGAEIFVANLVALSLLRELAPLMTAILLAGRSGAAFAAEIGT 237 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 MK+NEEI+A+ TMGLD VR L+ R+ A + +PLLT++AN ++G ++V+ K +DIPF Sbjct: 238 MKVNEEINALTTMGLDPVRFLVVTRVLAAVAVMPLLTLVANLVGLVGGAVVM-KGFDIPF 296 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 +F++ S TL+++ GL KA + V G + ++G T VV +I Sbjct: 297 VTYFNQVTSAVTLSDLLGGLFKATVFGLLVAGVGCLRGLETRSGAAAVGISTTRAVVSAI 356 Query: 355 SIVIIIDSLFAIFYFAIGI 373 ++++ D +FA+ ++ + I Sbjct: 357 ILIVVADGVFAVVFYHLDI 375 >gi|256828281|ref|YP_003157009.1| protein of unknown function DUF140 [Desulfomicrobium baculatum DSM 4028] gi|256577457|gb|ACU88593.1| protein of unknown function DUF140 [Desulfomicrobium baculatum DSM 4028] Length = 380 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 105/353 (29%), Positives = 185/353 (52%), Gaps = 17/353 (4%) Query: 17 SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EKYHGKIKLQG 73 +PEI + + + + + I++D LS +T +D GA +I+ EK +K+ G Sbjct: 35 TPEIMDRLAQLPLPLPRRIRAD-----LSGVTRMDDCGALVILQLRRMAEKNGCDLKMHG 89 Query: 74 VSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILG 133 H+++L + + PQ + + G K + N + + +G Sbjct: 90 TPGHVQELLDFLRL-------DDPPQSVGIKRAKPDFMTRFGIKTLDVTNQAVTHVSFVG 142 Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 V+ + + L + M VGV +P+V LISF+ G ++A A QL QF Sbjct: 143 EVVVTLLSLLRHPDRLR--LGDTVLYMQRVGVDALPIVGLISFLLGLIMAFMSAVQLQQF 200 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 GA I+ L+++ +RE+G ++TA+++AGRSGSA AEIG+MK++EE+DA+ TMG Sbjct: 201 GANIYVASLVALAMVRELGPIMTAILVAGRSGSAFAAEIGTMKVSEEVDALVTMGFKPAM 260 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 L++P+I A ++ +PLL + +N AI G ++ D+ + ++ +T ++ +I G Sbjct: 261 FLVAPKIIASVLVVPLLAMYSNLFAIAGGLLIGVTTLDLTVNAYMAQTMNTLSIFDINWG 320 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L K+ A I V +G+ V + S+G+ T+ VV I +VI++DS+ A+ Sbjct: 321 LFKSAIFAVLIATVGCFKGYQVRGGAASVGQATTSAVVTGIFLVILVDSILAV 373 >gi|254417869|ref|ZP_05031593.1| conserved hypothetical protein [Brevundimonas sp. BAL3] gi|196184046|gb|EDX79022.1| conserved hypothetical protein [Brevundimonas sp. BAL3] Length = 372 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 107/374 (28%), Positives = 197/374 (52%), Gaps = 18/374 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAIN-KSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +G R G+W + + + + ++ + I+S VD + DT GA + + Sbjct: 13 DGTAKLRLVGDWTTTALGRLPQRLGKDLDGRKIES----VDTRDLGRFDTAGA---LALV 65 Query: 63 EKYHGKIKLQGVSTHIE--QLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 + H + + E +++++I RK K Q F ++F IG+ + Sbjct: 66 QASHCGVPKSAWTERPEAGRIYTMIEALERKSSPPPK-QPGAFTSAFAK----IGRGVYD 120 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 F ++ LG ++ E + + + + Q G+ +P+V++ +F GA Sbjct: 121 FGAEAMLSLAFLGRLMEAVVEAAKNPGGIR--WPAWVSQAERAGLDAIPIVMVTNFFIGA 178 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A G L+ FGA++F++ L+ + RE V++ +V++AGRS SA AEIGSM++N+E Sbjct: 179 VVAFIGVDLLTDFGAQVFAVQLIGVAMFREFAVVIASVLLAGRSASAFAAEIGSMRMNQE 238 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +DA++ MG++ + L+ PR+ AL++ LPLLT + ++G IV W ++ A FF R Sbjct: 239 VDAMQVMGVNPFQALVVPRLAALVLMLPLLTFMGMIGGLLGGLIVCWSSLNLGPAFFFQR 298 Query: 301 FHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 ++A ++ GL+KAP A I + ++G +V SLG++VT VVQ+I +I+ Sbjct: 299 LVEDGSMAQHMMVGLVKAPVFALVIAAIGCRQGMSVAGDVESLGRRVTAAVVQAIFAIIL 358 Query: 360 IDSLFAIFYFAIGI 373 +D++FA+ + + I Sbjct: 359 LDAVFALMFLELDI 372 >gi|327399071|ref|YP_004339940.1| hypothetical protein Hipma_0911 [Hippea maritima DSM 10411] gi|327181700|gb|AEA33881.1| protein of unknown function DUF140 [Hippea maritima DSM 10411] Length = 349 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 110/343 (32%), Positives = 185/343 (53%), Gaps = 18/343 (5%) Query: 31 INKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHR 90 I K + AI+D+ +++DT + L+ Y + ++ + +Q I H Sbjct: 25 ITKINECKPAIIDVRGASKLDT--SSLV------YLASLNIKLLLNKNDQSLLNIVLQHI 76 Query: 91 KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFK 150 + K +K R F Y+ +G V+ + + LG V F + +F+ Sbjct: 77 PEKKKKKDSRGFLYS--------LGYAFVERLKELYVFMSFLGEVFVGFIGFILNPKRFR 128 Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210 L S ++ + +G + +P++ ISF+ GAVIA G+ +L QFGA IF +DL+SI LRE Sbjct: 129 --LKSTLKDVELMGFNAIPILTTISFLIGAVIAYHGSVRLKQFGANIFVVDLVSISVLRE 186 Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 +G L+ A+++AGRS S+ A+IG MK+ EE+D I+TMG++ IL+ P+I ++++ +PLL Sbjct: 187 LGPLIVAILLAGRSSSSYTAQIGIMKVTEEVDVIKTMGVNPYDILVFPKIVSMLVCVPLL 246 Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330 +LA+ ++G +V +I F R H + +G++KAP A I + Sbjct: 247 IVLADVMGVLGGMVVAHLSLNITVRDFILRLHQAIGIKTFVSGILKAPAFAFLIATIGAF 306 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 +GF + S+GK VT VV SI VII D++F++ + +GI Sbjct: 307 KGFQTKKNVESIGKSVTVSVVDSIFGVIIADAIFSVLFRWMGI 349 >gi|302039183|ref|YP_003799505.1| putative ABC transporter permease [Candidatus Nitrospira defluvii] gi|300607247|emb|CBK43580.1| putative ABC-type transport system, permease component [Candidatus Nitrospira defluvii] Length = 373 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 125/368 (33%), Positives = 200/368 (54%), Gaps = 27/368 (7%) Query: 9 FRFAGNWKSPEISEIADDVVMAINK-SIQSDSAIV-DLSAITEIDTIGAELIMY--FME- 63 R G W P+++ + A+ + + + SA+V + S I DT GA +++Y ME Sbjct: 18 LRCRGAWTMPDVAPVER----ALRRMTWPARSALVFEASGIEAFDTGGA-VVLYRALMEA 72 Query: 64 KYHG-KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS---FFYNSFKNLHYHIGKKIV 119 + G ++ +QG+ QL SL+S + P+++ F S +N G + Sbjct: 73 RRQGCEVSIQGLRPDYAQLMSLVSSHWAAMVAEVAPRQNGSERFRASIRN-RVAQGAGAL 131 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 +F+ +S + LV AS + + S + + GV +P+ L++F+ G Sbjct: 132 EFLGESAT-----ALV-----RLVASPRRLR--WRSCLNSLRLDGVHALPITGLLTFLIG 179 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 VIA QGA QL +FG IF +DL+ I LREI L+ A++IAGRSGSA A+IG+MK+ E Sbjct: 180 VVIAYQGAEQLRKFGTNIFIVDLVGISLLREIAPLIAAILIAGRSGSAYAAQIGTMKVTE 239 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DA++T GL + +L+ PR+ AL+++LPLLT A+ + G ++ ++ F F S Sbjct: 240 ELDALQTFGLSPIELLVLPRVLALVVALPLLTAYADVLGVFGGMLIASNQLNVSFTAFLS 299 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 RF L ++ GL KAPF A I +V +GF + + +G+ T VVQSI +VII Sbjct: 300 RFEEAVALRHMLIGLGKAPFFAVIIALVGCYQGFQIRGGVDDVGRHTTISVVQSIFLVII 359 Query: 360 IDSLFAIF 367 D++ +I Sbjct: 360 FDAICSIL 367 >gi|94498322|ref|ZP_01304881.1| ABC transporter, permease protein, putative [Sphingomonas sp. SKA58] gi|94422202|gb|EAT07244.1| ABC transporter, permease protein, putative [Sphingomonas sp. SKA58] Length = 303 Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 90/259 (34%), Positives = 150/259 (57%), Gaps = 2/259 (0%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172 G++++ D+ G +I G + + + + L+ M G++G+P+V Sbjct: 45 RFGRQVIGTAGDAYQMLVFTGQLIIALGRTLGNPRRLR--MTPLVAFMQDAGINGLPIVF 102 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 +++F GAVIA G L+ G E+F+I L+ + LRE GV++TA++++GRS S+ A+I Sbjct: 103 IMTFFIGAVIALVGTNLLTTLGVEVFTIQLVGVAILREFGVVITAILLSGRSASSFAAQI 162 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 GSM++N+E DA++ MG+D L+ PRI A ++ +PL+T A+ + G +V W DI Sbjct: 163 GSMRMNQETDAMQVMGVDRFDALVIPRILAALLMMPLMTFCADIGGLAGGLLVSWVTIDI 222 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 F R T + + + G+ KAPF+A I + G VG SLG+ VT+ VVQ Sbjct: 223 SPVFFIQRTLETVDIKHFWIGMCKAPFLALIIAAAGCRHGLMVGGDVQSLGQNVTSAVVQ 282 Query: 353 SISIVIIIDSLFAIFYFAI 371 SI +VI+ D++FA+ + A+ Sbjct: 283 SIFMVIMFDAIFAVIFMAL 301 >gi|261855956|ref|YP_003263239.1| hypothetical protein Hneap_1358 [Halothiobacillus neapolitanus c2] gi|261836425|gb|ACX96192.1| protein of unknown function DUF140 [Halothiobacillus neapolitanus c2] Length = 413 Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 104/376 (27%), Positives = 193/376 (51%), Gaps = 18/376 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSD-SAIVDLSAITEIDTIGAELIMYF 61 + +TV +G W + + ++ + ++D IV S ++ D GA ++ + Sbjct: 49 DRQVTVLVLSGTWTIHSLQHVPTLDTLSGAPTKKADKPCIVLRSEMSAFDGAGALVLARW 108 Query: 62 MEKYHG---KIKLQGVSTHIEQLFSLIS--FTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116 + + ++ L L L+ + +KP+ F +H + Sbjct: 109 IRTWRADGFEVDLGEFPPRETSLLQLLDDRLVDTEPAPVKKPKMIARIGQFTVEQWHETR 168 Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + F LG ++ + ++ + ++I ++ GV + +V L+SF Sbjct: 169 SFLAF----------LGELVWRGAPLLLTFWRIR--WRAVISEIDAAGVRALGIVGLLSF 216 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 + G V+A QG L +GA + +DL+ I+ LRE+G LL A+++AGR+GS+ A++G+M+ Sbjct: 217 MIGMVMAYQGGATLQNYGANVLIVDLVGIITLREMGPLLAAIIVAGRTGSSYTAQLGTMR 276 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 I EEIDA+R +G+ ILI P++ ALII+LPLL+I ++ ++G ++V + + F+V Sbjct: 277 ITEEIDALRAIGVPPFEILIFPKVLALIITLPLLSIFSDLMGLLGGAVVANYGFGVSFSV 336 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +F R +L ++ GL+K P A I ++ +G V + +G T VVQ+I + Sbjct: 337 YFDRMPEAVSLTTLWLGLLKTPVFAIVIALIGCMQGLRVRGSAAEVGHATTVSVVQAIFM 396 Query: 357 VIIIDSLFAIFYFAIG 372 VI+ID+LF++ Y +G Sbjct: 397 VIVIDALFSVLYNVMG 412 >gi|322378616|ref|ZP_08053052.1| hypothetical protein HSUHS1_0274 [Helicobacter suis HS1] gi|322380555|ref|ZP_08054721.1| hypothetical integral membrane protein [Helicobacter suis HS5] gi|321147017|gb|EFX41751.1| hypothetical integral membrane protein [Helicobacter suis HS5] gi|321148923|gb|EFX43387.1| hypothetical protein HSUHS1_0274 [Helicobacter suis HS1] Length = 368 Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 109/311 (35%), Positives = 168/311 (54%), Gaps = 30/311 (9%) Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 Y+ K+ L+ V T I S++ H ++ F N + L G+ +V F N Sbjct: 76 YNAKV-LEVVETWIRANPSILKQEHVSRV---------FINPLEKL----GRGVVSFYNT 121 Query: 125 SCSQAHILGLVISNTG-------EFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + G++I G C + LI ++ G +PV IL FV Sbjct: 122 LLNTFNFCGMIIYYVGLAFIRPKSVCWTP---------LIHHIHESGFKVLPVSILTVFV 172 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G IA +GA QL + G + SI++ + L LRE+G + A+++AGRS S+ A+IG+MKI Sbjct: 173 VGFAIALEGAVQLQELGFPMMSIEMTAKLALREMGPFILALVVAGRSASSFTAQIGAMKI 232 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EE+DA+ TMGL+ L+ PR+ AL+I++PLL LA+ A++GA I I I FA + Sbjct: 233 TEELDAMETMGLNPFAFLVLPRVVALVIAMPLLVFLADAFALLGAMIAIKYQLGIGFAHY 292 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 +R H L++ F GLIKAPF AI +V GF V ++ S+G+ T VV S+ + Sbjct: 293 VARLHENVGLSHFFIGLIKAPFWGFAIALVGCMRGFEVKGNTESIGQLTTISVVNSLFWI 352 Query: 358 IIIDSLFAIFY 368 I +D+LF++ + Sbjct: 353 IFLDALFSVIF 363 >gi|205355658|ref|ZP_03222428.1| putative ABC transport system permease protein [Campylobacter jejuni subsp. jejuni CG8421] gi|205346435|gb|EDZ33068.1| putative ABC transport system permease protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 337 Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 112/341 (32%), Positives = 174/341 (51%), Gaps = 24/341 (7%) Query: 7 TVFRFAGN-------WKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 T F+F N W I ++ +A+ IQS I D + IDT G + Sbjct: 3 TNFKFQNNTLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFL 59 Query: 60 YF---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF--FYNSFKNLHYHI 114 ++ + KI +G+++ + LF L +++ K +K ++F ++ L + Sbjct: 60 ALENDLKDKNIKIAKEGLNSRFQTLFELCEKNYQRLSKTKKSHKNFSEYFIDLGKLSLEL 119 Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 K + KFIN + + L L + N F +F FL + + +P+VIL Sbjct: 120 LKILRKFINFTGAFFTSLFLCLKNPKNF-----RFIAFLYHIENSAF----KALPIVILT 170 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 + + G V+A Q A+QL+QFGA IF +DLM I RE+ L+ A++IAGRS S+ A+IG Sbjct: 171 ALLVGVVLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGV 230 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 MKI +EI A+ TMG +I PR+ AL+I++PL+ +++ +IIG +V DI F Sbjct: 231 MKITDEIAAMNTMGFRSFEFIIIPRVMALVIAMPLIVAISDAISIIGGMMVAKLNLDISF 290 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 A F F + +IF GL KAP IG++A GF V Sbjct: 291 AEFLRHFREAVDIKHIFIGLAKAPIFGFLIGLIACFRGFEV 331 >gi|313682999|ref|YP_004060737.1| hypothetical protein Sulku_1877 [Sulfuricurvum kujiense DSM 16994] gi|313155859|gb|ADR34537.1| protein of unknown function DUF140 [Sulfuricurvum kujiense DSM 16994] Length = 373 Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 115/364 (31%), Positives = 184/364 (50%), Gaps = 30/364 (8%) Query: 12 AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY----FMEKYHG 67 +G+W +S+ A ++ I S+ + D+S ITEID+ G L F E+ H Sbjct: 24 SGSWTIEHLSDAARELEALIPLSLVT----WDMSGITEIDSSGIALWQLTNRTFEERGH- 78 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + + +LF L+ KP R + + Y +GK+ + Sbjct: 79 TCETVNEREDLSRLFRLL---------YSKPFRDVPIPAVPSSLYRLGKETYEIFRG--- 126 Query: 128 QAHILGLVISNTGE-FCASSYKFKGFLLSLIR----QMYYVGVSGVPVVILISFVTGAVI 182 +G ++ GE F Y + L R + G +P++ L +F+ G V+ Sbjct: 127 ----IGTFLAFLGEAFILFFYTLRHPRLIRYRSIGVHILETGARALPIIALSAFLIGVVV 182 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A Q QL +FGA+IF +D++ I RE+ L+TA+++AGRSGSA A+IG+MK+ +EID Sbjct: 183 AYQSVVQLQKFGADIFIVDMIGISLTRELAPLITAIVVAGRSGSAFTAQIGTMKMTQEID 242 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+RTMG D L+ PR+ AL+I +PLL A+ I G ++ + + F+ F R Sbjct: 243 AMRTMGFDPFTFLVWPRVIALMIIMPLLIFFADMVGIFGGMVIAQVHSHLSFSEFIHRLQ 302 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L + GLIK PF A I V+ GF V +++ S+G+ T VV +I +VI D+ Sbjct: 303 GALALKHYLIGLIKGPFFAFLIAFVSTYRGFQVSMNTESIGQYTTKSVVNAIFLVIACDA 362 Query: 363 LFAI 366 +F++ Sbjct: 363 IFSV 366 >gi|114320361|ref|YP_742044.1| hypothetical protein Mlg_1205 [Alkalilimnicola ehrlichii MLHE-1] gi|114226755|gb|ABI56554.1| protein of unknown function DUF140 [Alkalilimnicola ehrlichii MLHE-1] Length = 377 Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 108/367 (29%), Positives = 195/367 (53%), Gaps = 18/367 (4%) Query: 12 AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKL 71 +G+W ++ +A + + ++ +D SA+ +D GA + E+ ++ Sbjct: 24 SGDWTRTGLTRLAGQDLRTLPPP-RTGGWTLDASAMGRLDLTGARQLHRLQER----LRE 78 Query: 72 QGVSTHI-----EQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 +G S + E + L++FT R +R L +G++ V + Sbjct: 79 RGDSVRLGEERPEHMDGLLAFTERAV-----SERRPPPPPPGPLE-RLGRQTVIRLGHFW 132 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + +G + + + LS ++ GV +P++ L++F+TG VIA QG Sbjct: 133 AFLAFIGEIALEALPRLLRPWTIRWKQLSA--EIQKAGVQALPIIGLLAFLTGLVIAYQG 190 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 L ++GA IF ++L+S+ LRE+ +LTA+++AGR+GS+ A++G+MKI EEIDA+RT Sbjct: 191 GDTLERYGANIFLVELVSVTMLREMAPMLTAIVVAGRTGSSWAAQLGTMKITEEIDALRT 250 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +G+ +LI PR+ AL++ LPLLTI A+ I+G +V + + F +R Sbjct: 251 LGISPFDMLILPRLMALMVVLPLLTIYADVLGILGGMLVADLMFGVAMHDFINRLPEAIA 310 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 ++++ GL+KAP A I +A +G V + S+G+ T VVQ+I +VI+ D++F+I Sbjct: 311 TSHLWVGLVKAPVFALIIVGIACFQGMRVKGSAESVGRATTITVVQAIFLVIVTDAVFSI 370 Query: 367 FYFAIGI 373 + +G+ Sbjct: 371 LFNLVGL 377 >gi|289208500|ref|YP_003460566.1| hypothetical protein TK90_1322 [Thioalkalivibrio sp. K90mix] gi|288944131|gb|ADC71830.1| protein of unknown function DUF140 [Thioalkalivibrio sp. K90mix] Length = 382 Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 100/335 (29%), Positives = 183/335 (54%), Gaps = 14/335 (4%) Query: 42 VDLSAITEIDTIGAELIMYF---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 +D+ + D GA L+ +E+ +++L GV +E+ T ++++ +P Sbjct: 59 LDVGGLEYCDGAGAALLHALERDIERAGRQVELVGVQGLVEE-----QLTPYRELETVEP 113 Query: 99 QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158 R + + L + + + + SQ +G + G + + + R Sbjct: 114 AR---HETRGGLLAQSFEAVSRVGQAAYSQFGFIGELTRALGSALLNPRQVR--WGDTFR 168 Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 G +P+V LI+F+ G ++A Q A + QFG EIF +L+++ RE+G L+ A+ Sbjct: 169 VAEAAGFQALPIVSLIAFLLGVILAFQSAIAMRQFGGEIFVANLVAVSLFRELGPLMMAI 228 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++AGRSG+A AEIG+MK+NEE++A++TMGLD VR L+ P++ A I+ PLL + AN Sbjct: 229 LLAGRSGAAFAAEIGTMKVNEEVNALKTMGLDPVRFLVLPKVLAGILVAPLLALYANMIG 288 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 ++GA++V+ + + IP+ FF++ +L+++F+GL KA I V G Sbjct: 289 LLGAAVVM-QGFGIPWTAFFNQVTVALSLSDLFSGLFKAVIFGLLIAGVGCLRGLQTASG 347 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + ++G T+ VV SI ++++ D LFA+ ++ +G+ Sbjct: 348 AAAVGISTTSAVVTSIILIVVFDGLFAVLFYHMGV 382 >gi|301057238|ref|ZP_07198367.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300448689|gb|EFK12325.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 352 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 105/329 (31%), Positives = 178/329 (54%), Gaps = 13/329 (3%) Query: 42 VDLSAITEIDTIGAELIMYFME---KYHGKIKLQGVSTHIEQLFSLISFTHR-KKIKNQK 97 VDL +T +D G +++ + K HG L+ I ++ ++F +K+ +K Sbjct: 27 VDLENVTYLDDFGTLVLVELRKLAAKEHGAFNLENTGKKIREMLMFLNFDSLFQKVSFEK 86 Query: 98 PQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLI 157 +R + + +G+K I D +G + + G A + + Sbjct: 87 KRR-------QGIFVRLGEKTFDIILDLKYAISFIGAITLSLGYHLAHPRALRKD--DTL 137 Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 M GV G+P+V LISF+ G ++A + QL QFGA I+ L+S+ RE+G ++TA Sbjct: 138 DYMQKTGVDGLPIVALISFLMGLIMAFMSSVQLEQFGANIYVASLVSLAMTRELGPIMTA 197 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +++AGRSGSA AEIG+MKI+EE+DA+ TMG D V L+ P++ A +I +P+LT+ ++ Sbjct: 198 IIVAGRSGSAFAAEIGTMKISEEVDALYTMGFDPVGFLVIPKLIAALIMVPILTLFSDIF 257 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 AI G +V D+ + ++ +T L ++F G++K+ A I V GF V Sbjct: 258 AIAGGLLVGVFMLDLTVGAYVAQTINTLALFDVFWGVLKSGVFALLITWVGCLRGFQVSG 317 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + S+G+ T+ VV SI ++I+ DS+F++ Sbjct: 318 GAASVGQATTSAVVSSIFLIILFDSVFSV 346 >gi|34558310|ref|NP_908125.1| toluene ABC transporter permease [Wolinella succinogenes DSM 1740] gi|34484029|emb|CAE11025.1| conserved hypothetical protein-ABC-type toluene export system, permease component [Wolinella succinogenes] Length = 366 Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 107/364 (29%), Positives = 191/364 (52%), Gaps = 26/364 (7%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLS--AITEIDTIGAELIMYF---MEKYHG 67 G W E+ +++ + + + DS V +S ++ +D A L++ +++ G Sbjct: 16 GQWDY----ELPKELISRLFLACKRDSVRVSVSLLGVSSLDYSAATLLLELSMAVKRRGG 71 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + +GV I + ++ K+ K P +S L G+KI + + Sbjct: 72 EWAWEGVPPAIAPILGIV-----KESKRDLPAPPPSLSSLLRL----GEKIKESLKGLGR 122 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV---GVSGVPVVILISFVTGAVIAQ 184 A LG + G S L+ L +Y++ G+ VP++ L SF+ G V+A Sbjct: 123 FASFLGETLFAMGRSLKESR-----LIRLKATLYHIEESGIKAVPIIALTSFLVGIVMAY 177 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QGA QL +FGA I +++ +L LRE+G ++ A+++AGRS S+ A+IG MKI EEIDA+ Sbjct: 178 QGAIQLEKFGASIIVVEMTGMLTLRELGPVIAAIVVAGRSASSYAAQIGVMKITEEIDAM 237 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 +TM + L+ PR+ AL++ +PL+ L+N + ++G ++I Y I + + RF+ Sbjct: 238 KTMNFNPYAFLVIPRVIALVVVMPLVIFLSNVAGLLGEMLIIKSYLGIGYLQYIERFYEM 297 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + +++ GLIKAPF I ++ GF + + S+G+ T VV +I VI ++++F Sbjct: 298 VEIRHLWVGLIKAPFYGAIIALIGCFRGFQITGSTESVGRYTTISVVNAIFWVIALNAMF 357 Query: 365 AIFY 368 +I + Sbjct: 358 SIIF 361 >gi|78777725|ref|YP_394040.1| hypothetical protein Suden_1528 [Sulfurimonas denitrificans DSM 1251] gi|78498265|gb|ABB44805.1| conserved hypothetical protein [Sulfurimonas denitrificans DSM 1251] Length = 373 Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 87/215 (40%), Positives = 135/215 (62%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 +M + + ++ L SF+ G V+A Q A+QL +GA IF +D++ + LRE+ L+TA+ Sbjct: 159 EMNECAIKALGIISLTSFLIGVVVAYQSAYQLKLYGANIFIVDMLGLSILRELSPLITAI 218 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 +IAGRSGSA A+IG+MKI +E+DA++TMG D R L+ P+I AL+I++PLL +++ A Sbjct: 219 VIAGRSGSAFTAQIGAMKITQELDAMQTMGFDPYRFLVVPKIIALMITMPLLIFVSDIMA 278 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 IIG IV +I +F RF+ + + G+ K PF A I +A+ +G V Sbjct: 279 IIGGMIVANLDLNITVDMFLDRFNEVINIKHFIVGISKGPFFAFLIATIAIYQGLLVKDD 338 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + S+G T VV+SI VII D++F+I + +GI Sbjct: 339 TQSIGLNTTKSVVESIFAVIICDAIFSIAFTNLGI 373 >gi|217033903|ref|ZP_03439327.1| hypothetical protein HP9810_870g35 [Helicobacter pylori 98-10] gi|216943666|gb|EEC23111.1| hypothetical protein HP9810_870g35 [Helicobacter pylori 98-10] Length = 377 Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 96/271 (35%), Positives = 152/271 (56%), Gaps = 13/271 (4%) Query: 111 HYHI-----GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 HY + GK IVK N + + G+++ F S++ K F ++ + +Y++ Sbjct: 112 HYELLITKLGKSIVKTYNTFLNAFNFCGMILFY---FIKSAFNPKRFCITPL--LYHINE 166 Query: 166 SG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 SG +PV IL F+ G +A QGA QL GA + S+++ + L LREIG + +++AG Sbjct: 167 SGFKVLPVSILTVFIVGFAVALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAG 226 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 RS S+ A+IG MKI EE+DA++TMG + L+ PR+ AL+I LPLL +A+ AI+G Sbjct: 227 RSASSFTAQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGG 286 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 I D+ F + R H T + G++KAPF AI +V GF V + S+ Sbjct: 287 MFAIKYQLDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESI 346 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 G+ T VV ++ +I +D++F+I + + I Sbjct: 347 GRLTTISVVNALFWIIFLDAVFSIIFSKLNI 377 >gi|15646075|ref|NP_208257.1| hypothetical protein HP1466 [Helicobacter pylori 26695] gi|2314643|gb|AAD08507.1| conserved hypothetical integral membrane protein [Helicobacter pylori 26695] Length = 377 Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 96/271 (35%), Positives = 152/271 (56%), Gaps = 13/271 (4%) Query: 111 HYHI-----GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 HY + GK IV+ N + + G+++ F S + K F ++ + +Y++ Sbjct: 112 HYELLITKLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LYHINE 166 Query: 166 SG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 SG +PV IL F+ G +A QGA QL GA + S+++ + L LREIG + +++AG Sbjct: 167 SGFKVLPVSILTVFIVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAG 226 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 RS S+ A+IG MKI EE+DA++TMG + L+ PR+ AL+I LPLL +A+ AI+G Sbjct: 227 RSASSFTAQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGG 286 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 I D+ F + RFH T + G++KAPF AI +V GF V + S+ Sbjct: 287 MFAIKYQLDLGFPSYIDRFHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESI 346 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 G+ T VV ++ +I +D++F+I + + I Sbjct: 347 GRLTTISVVNALFWIIFLDAIFSIIFSKLNI 377 >gi|108563874|ref|YP_628190.1| hypothetical protein HPAG1_1449 [Helicobacter pylori HPAG1] gi|107837647|gb|ABF85516.1| ABC transport system permease [Helicobacter pylori HPAG1] Length = 377 Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 96/271 (35%), Positives = 152/271 (56%), Gaps = 13/271 (4%) Query: 111 HYHI-----GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 HY + GK IV+ N + + G+++ F S + K F ++ + +Y++ Sbjct: 112 HYELLITKLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LYHINE 166 Query: 166 SG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 SG +PV IL F+ G +A QGA QL GA + S+++ + L LREIG + +++AG Sbjct: 167 SGFKVLPVSILTVFIVGFAVALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAG 226 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 RS S+ A+IG MKI EE+DA++TMG + L+ PR+ AL+I LPLL +A+ AI+G Sbjct: 227 RSASSFTAQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADSFAILGG 286 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 I D+ F + RFH T + G++KAPF AI +V GF V + S+ Sbjct: 287 MFAIKYQLDLGFPSYIDRFHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESI 346 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 G+ T VV ++ +I +D++F+I + + I Sbjct: 347 GRLTTISVVNALFWIIFLDAVFSIVFSKLNI 377 >gi|307638119|gb|ADN80569.1| organic solvent resistant ABC transporter [Helicobacter pylori 908] gi|325996719|gb|ADZ52124.1| putative ABC transport system, permease protein [Helicobacter pylori 2018] Length = 377 Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 93/264 (35%), Positives = 150/264 (56%), Gaps = 8/264 (3%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---VP 169 +GK +V+ N + + G+++ F S + K F ++ + +Y++ SG +P Sbjct: 119 KLGKSLVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LYHINESGFKVLP 173 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V IL F+ G +A QGA QL GA + S+++ + L LREIG + +++AGRS S+ Sbjct: 174 VSILTVFIVGFAVALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFT 233 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A+IG MKI EE+DA++TMG + L+ PR+ AL+I LPLL +A+ AI+G I Sbjct: 234 AQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQ 293 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 D+ F + RFH T + G++KAPF AI +V GF V + S+G+ T Sbjct: 294 LDLGFPSYIDRFHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTIS 353 Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373 VV ++ +I +D++F+I + + I Sbjct: 354 VVNALFWIIFLDAIFSILFSKLNI 377 >gi|325998313|gb|ADZ50521.1| hypothetical protein hp2017_1400 [Helicobacter pylori 2017] Length = 377 Score = 162 bits (410), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 93/264 (35%), Positives = 150/264 (56%), Gaps = 8/264 (3%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---VP 169 +GK +V+ N + + G+++ F S + K F ++ + +Y++ SG +P Sbjct: 119 KLGKSLVETYNTFLNAFNFCGMILF---YFIKSVFNPKRFCITPL--LYHINESGFKVLP 173 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V IL F+ G +A QGA QL GA + S+++ + L LREIG + +++AGRS S+ Sbjct: 174 VSILTVFIVGFAVALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFT 233 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A+IG MKI EE+DA++TMG + L+ PR+ AL+I LPLL +A+ AI+G I Sbjct: 234 AQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQ 293 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 D+ F + RFH T + G++KAPF AI +V GF V + S+G+ T Sbjct: 294 LDLGFPSYIDRFHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTIS 353 Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373 VV ++ +I +D++F+I + + I Sbjct: 354 VVNALFWIIFLDAIFSILFSKLNI 377 >gi|308062730|gb|ADO04618.1| putative ABC transport system permease protein [Helicobacter pylori Cuz20] Length = 377 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 104/337 (30%), Positives = 178/337 (52%), Gaps = 15/337 (4%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLIS--FTHRKKIKNQKPQ 99 VD S +ID + + +++ I+L VS + ++ + ++++K Sbjct: 51 VDFSGCQKIDFVFGMFLFDLVKERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAS 110 Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 + + + + +GK IVK N + + G+++ F S + K F ++ + Sbjct: 111 KRY-----ELMITKLGKSIVKTYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL-- 160 Query: 160 MYYVGVSG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 +Y++ SG +PV IL F+ G +A QGA QL GA + S+++ + L LREIG + Sbjct: 161 LYHINESGFKVLPVSILTVFIVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFIL 220 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 +++AGRS S+ A+IG MKI EE+DA++TMG + L+ PR+ AL+I LPLL +A+ Sbjct: 221 TLVVAGRSASSFTAQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADA 280 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 AI+G I D+ F + R H T + G++KAPF AI +V GF V Sbjct: 281 FAILGGMFAIKYQLDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVK 340 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + S+G+ T VV ++ +I +D++F+I + + I Sbjct: 341 GDTESIGRLTTISVVNALFWIIFLDAVFSIIFSKLNI 377 >gi|317011599|gb|ADU85346.1| putative ABC transport system permease protein [Helicobacter pylori SouthAfrica7] Length = 377 Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 94/264 (35%), Positives = 150/264 (56%), Gaps = 8/264 (3%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---VP 169 +GK IV+ N + + G+++ F S + K F ++ + +Y++ SG +P Sbjct: 119 KLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LYHINESGFKVLP 173 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V IL F+ G +A QGA QL GA + S+++ + L LREIG + +++AGRS S+ Sbjct: 174 VSILTVFIVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFT 233 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A+IG MKI EE+DA++TMG + L+ PR+ AL+I LPLL +A+ AI+G I Sbjct: 234 AQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQ 293 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 D+ F + RFH T + G++KAPF AI +V GF V + S+G+ T Sbjct: 294 LDLGFPSYIDRFHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTIS 353 Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373 VV ++ +I +D++F+I + + I Sbjct: 354 VVNALFWIIFLDAIFSIVFSKLNI 377 >gi|308185234|ref|YP_003929367.1| putative ABC transport system permease protein [Helicobacter pylori SJM180] gi|308061154|gb|ADO03050.1| putative ABC transport system permease protein [Helicobacter pylori SJM180] Length = 377 Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 104/335 (31%), Positives = 175/335 (52%), Gaps = 11/335 (3%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 VD S +ID + + + + I+L VS + ++ K+ + + S Sbjct: 51 VDFSGCQKIDFVFGMFLFDLVRERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAS 110 Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY 161 ++ L +GK +V+ N + + G+++ F S + K F ++ + +Y Sbjct: 111 ---KQYELLITKLGKSLVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LY 162 Query: 162 YVGVSG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 ++ SG +PV IL F+ G +A QGA QL GA + S+++ + L LREIG + + Sbjct: 163 HINESGFKVLPVSILTVFIVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTL 222 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++AGRS S+ A+IG MKI EE+DA++TMG + L+ PR+ AL+I LPLL +A+ A Sbjct: 223 VVAGRSASSFTAQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFA 282 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 I+G I D+ F + R H T + G++KAPF AI +V GF V Sbjct: 283 ILGGMFAIKYQLDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGD 342 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + S+G+ T VV ++ +I +D++F+I + + I Sbjct: 343 TESIGRLTTISVVNALFWIIFLDAIFSILFSKLNI 377 >gi|296134762|ref|YP_003642004.1| protein of unknown function DUF140 [Thiomonas intermedia K12] gi|295794884|gb|ADG29674.1| protein of unknown function DUF140 [Thiomonas intermedia K12] Length = 380 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 103/364 (28%), Positives = 192/364 (52%), Gaps = 20/364 (5%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66 V R G W + ++ + + A + + D++ T +DT GA L++ M ++ Sbjct: 29 VCRLQGAWNAQGLAREPNTHLPAGTRHVTLDASA------TTLDTPGALLLVRSMAQWQS 82 Query: 67 --GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + + G+S +QL L+ R++ P L IG+ + +++ Sbjct: 83 AGATVDVSGLSPPQQQLLDLV----RQRALALPPAARRL-----GLLGDIGRATLIALDE 133 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + +G ++ ++ + +I ++ G+ + ++ L+SF+ G V+A Sbjct: 134 LRALLAFVGELVWRGAPLLLQPWRVRWR--EVIHEIDAAGLRAIGIIGLLSFLIGMVMAY 191 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q L+ +GA I ++L+SI+ LRE+G LLTA+++AGR+GS+ A+IG+M+I EE+DA+ Sbjct: 192 QAGATLATYGANILIVNLVSIITLRELGPLLTAILVAGRTGSSYTAQIGTMRITEEVDAL 251 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R +GL +L+ P++ AL+I+LPLL + A+ + G +V Y +P + + +R Sbjct: 252 RALGLSPFEMLVLPKVIALVITLPLLALFADVMGLAGGGVVAAVGYGVPLSEYVARIPQV 311 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L + GL+KAP A I +V +G V + ++G+ T VVQ+I +VI+ID+ F Sbjct: 312 VGLKTLVLGLVKAPVFAVVIALVGCMQGLRVAGSAAAVGRATTVSVVQAIFLVIVIDASF 371 Query: 365 AIFY 368 ++ Y Sbjct: 372 SVLY 375 >gi|317181149|dbj|BAJ58935.1| hypothetical protein HPF32_1353 [Helicobacter pylori F32] Length = 377 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 103/335 (30%), Positives = 175/335 (52%), Gaps = 11/335 (3%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 VD S +ID + + + + I+L VS + ++ K+ + + S Sbjct: 51 VDFSGCQKIDFVFGMFLFDLVRERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKES 110 Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY 161 ++ + +GK IV+ N + + G+++ F S + K F ++ + +Y Sbjct: 111 ---KKYELMITKLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LY 162 Query: 162 YVGVSG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 ++ SG +P+ IL F+ G +A QGA QL GA + S+++ + L LREIG + + Sbjct: 163 HINESGFKVLPISILTVFIVGFAVALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTL 222 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++AGRS S+ A+IG MKI EE+DA++TMG + L+ PR+ AL+I LPLL +A+ A Sbjct: 223 VVAGRSASSFTAQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFA 282 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 I+G I D+ F + R H T + G++KAPF AI +V GF V Sbjct: 283 ILGGMFAIKYQLDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGD 342 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + S+G+ T VV ++ +I +D++F+I + + I Sbjct: 343 TESIGRLTTISVVNALFWIIFLDAVFSIIFSKLNI 377 >gi|317179642|dbj|BAJ57430.1| hypothetical protein HPF30_1333 [Helicobacter pylori F30] Length = 377 Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 104/337 (30%), Positives = 178/337 (52%), Gaps = 15/337 (4%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLIS--FTHRKKIKNQKPQ 99 VD S +ID + + +++ I+L VS + ++ + ++++K Sbjct: 51 VDFSGCQKIDFVFGMFLFDLVKERSLDIELCNVSENNACALKVVKDWLEKEEDLESKKAG 110 Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 + + + L +GK IV+ N + + G+++ F S + K F ++ + Sbjct: 111 KHY-----ELLITKLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL-- 160 Query: 160 MYYVGVSG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 +Y++ SG +PV IL F+ G +A QGA QL GA + S+++ + L LREIG + Sbjct: 161 LYHINESGFKVLPVSILTVFIVGFAVALQGALQLQDLGAPLMSVEMTAKLALREIGPFIL 220 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 +++AGRS S+ A+IG MKI EE+DA++TMG + L+ PR+ AL+I LPLL +A+ Sbjct: 221 TLVVAGRSASSFTAQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADA 280 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 AI+G I D+ F + R H T + G++KAPF AI +V GF V Sbjct: 281 FAILGGMFAIKYQLDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVK 340 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + S+G+ T VV ++ +I +D++F+I + + I Sbjct: 341 GDTESIGRLTTISVVNALFWIIFLDAVFSIIFSKLNI 377 >gi|157165030|ref|YP_001466748.1| MTA/SAH nucleosidase [Campylobacter concisus 13826] gi|112799982|gb|EAT97326.1| ABC transport system permease [Campylobacter concisus 13826] Length = 368 Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 115/369 (31%), Positives = 194/369 (52%), Gaps = 22/369 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 NG +FAG + + + +I K IQ V +E+ +I +++ Sbjct: 13 NGTATIKFAGEFSYKDAKNL-----QSIFKKIQKLKGNVKFD-FSELKSIDYAVLILLKN 66 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKI--KNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 +GK K + + T+ E++ ++ + +KI K P S N +G+KI + Sbjct: 67 TLNGK-KFE-IITNDEKIKAMSDLLNDEKIDFKYMPPHNSL------NFFSRLGEKICEG 118 Query: 122 INDSCSQAHILG--LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + LG L+ S F ++ +F+ F + I+ GV+ V +V L +F+ G Sbjct: 119 FVNLLEFGSFLGEFLIKSVRILFNPANLRFREFS-NYIKDG---GVNAVFIVSLTAFLIG 174 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A G+ L+ FGA IF +++M +L LRE+ L+ A+++AGRS S+ A+IG+MK+ E Sbjct: 175 VVLAYLGSAMLASFGASIFIVEIMGMLTLREVAPLIAAIVVAGRSASSFTAQIGAMKLTE 234 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDA++TMG + L+ PRI A+++ +P++ +A+ +I+G I+ DI F+ + + Sbjct: 235 EIDAMKTMGFEPFNFLVLPRIIAMVLCVPVIIFIADSISILGQMIICQTILDISFSDYLN 294 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 RF L + G+IKAPF I I+ GF V ++ SLG T VV +I VI Sbjct: 295 RFREMVELRHFAVGMIKAPFFGAVIAIIGCMRGFGVSQNAQSLGAMTTVSVVNAIFWVIA 354 Query: 360 IDSLFAIFY 368 +D+ FAI + Sbjct: 355 LDAFFAIIF 363 >gi|208435334|ref|YP_002267000.1| ABC transport system permease [Helicobacter pylori G27] gi|208433263|gb|ACI28134.1| ABC transport system permease [Helicobacter pylori G27] Length = 377 Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 93/264 (35%), Positives = 149/264 (56%), Gaps = 8/264 (3%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---VP 169 +GK IV+ N + + G+++ F S + K F ++ + +Y++ SG +P Sbjct: 119 KLGKSIVETCNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LYHINESGFKVLP 173 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V IL F+ G +A QGA QL GA + S+++ + L LREIG + +++AGRS S+ Sbjct: 174 VSILTVFIVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFT 233 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A+IG MKI EE+DA++TMG + L+ PR+ AL+I LPLL +A+ AI+G I Sbjct: 234 AQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQ 293 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 D+ F + R H T + G++KAPF AI +V GF V + S+G+ T Sbjct: 294 LDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTIS 353 Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373 VV ++ +I +D++F+I + + I Sbjct: 354 VVNALFWIIFLDAIFSILFSKLNI 377 >gi|308183565|ref|YP_003927692.1| putative ABC transport system permease protein [Helicobacter pylori PeCan4] gi|308065750|gb|ADO07642.1| putative ABC transport system permease protein [Helicobacter pylori PeCan4] Length = 377 Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 93/264 (35%), Positives = 149/264 (56%), Gaps = 8/264 (3%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---VP 169 +GK IV+ N + + G+++ F S + K F ++ + +Y++ SG +P Sbjct: 119 KLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LYHINESGFKVLP 173 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V IL F+ G +A QGA QL GA + S+++ + L LREIG + +++AGRS S+ Sbjct: 174 VSILTVFIVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFT 233 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A+IG MKI EE+DA++TMG + L+ PR+ AL+I LPLL +A+ AI+G I Sbjct: 234 AQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQ 293 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 D+ F + R H T + G++KAPF AI +V GF V + S+G+ T Sbjct: 294 LDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTIS 353 Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373 VV ++ +I +D++F+I + + I Sbjct: 354 VVNALFWIIFLDAIFSILFSKLNI 377 >gi|254779978|ref|YP_003058085.1| ABC-type transport system, permease; putative membrane protein [Helicobacter pylori B38] gi|254001891|emb|CAX30141.1| ABC-type transport system, permease; putative membrane protein [Helicobacter pylori B38] Length = 377 Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 95/271 (35%), Positives = 151/271 (55%), Gaps = 13/271 (4%) Query: 111 HYHI-----GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 HY + GK IV+ N + + G+++ F S + K F ++ + +Y++ Sbjct: 112 HYELLITKLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LYHINE 166 Query: 166 SG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 SG +PV IL F+ G +A QG QL GA + S+++ + L LREIG + +++AG Sbjct: 167 SGFKVLPVSILTVFIVGFAVALQGTLQLQDMGAPLVSVEMTAKLALREIGPFILTLVVAG 226 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 RS S+ A+IG MKI EE+DA++TMG + L+ PR+ AL+I LPLL +A+ AI+G Sbjct: 227 RSASSFTAQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGG 286 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 I D+ F + RFH T + G++KAPF AI +V GF V + S+ Sbjct: 287 MFAIKYQLDLGFPSYIDRFHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESI 346 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 G+ T VV ++ +I +D++F+I + + I Sbjct: 347 GRLTTISVVNALFWIIFLDAIFSIVFSKLNI 377 >gi|317010161|gb|ADU80741.1| putative ABC transport system permease protein [Helicobacter pylori India7] Length = 377 Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 93/264 (35%), Positives = 150/264 (56%), Gaps = 8/264 (3%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---VP 169 +GK IV+ N + + G+++ F S + K F ++ + +Y++ SG +P Sbjct: 119 KLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LYHINESGFKVLP 173 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V IL F+ G +A QGA QL + GA + S+++ + L LREIG + +++AGRS S+ Sbjct: 174 VSILTVFIVGFAVALQGALQLQEMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFT 233 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A+IG MKI EE+DA++TMG + L+ PR+ AL+I LPLL +A+ AI+G I Sbjct: 234 AQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAINYQ 293 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 D+ F + R H T + G++KAPF AI +V GF V + S+G+ T Sbjct: 294 LDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTIS 353 Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373 VV ++ +I +D++F+I + + I Sbjct: 354 VVNALFWIIFLDAVFSIIFSKLNI 377 >gi|298735565|ref|YP_003728086.1| putative ABC transport system permease protein [Helicobacter pylori B8] gi|298354750|emb|CBI65622.1| putative ABC transport system permease protein [Helicobacter pylori B8] Length = 377 Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 93/264 (35%), Positives = 150/264 (56%), Gaps = 8/264 (3%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---VP 169 +GK IV+ N + + G+++ F S + K F ++ + +Y++ SG +P Sbjct: 119 KLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LYHINESGFKVLP 173 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V IL F+ G +A QG QL GA + S+++ + L LREIG + +++AGRS S+ Sbjct: 174 VSILTVFIVGFAVALQGVLQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFT 233 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A+IG MKI EE+DA++TMG + L+ PR+ AL+I LPLL +A+ AI+G I Sbjct: 234 AQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQ 293 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 D+ F+ + RFH T + G++KAPF AI +V GF V + S+G+ T Sbjct: 294 LDLGFSSYIDRFHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTIS 353 Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373 VV ++ +I +D++F+I + + I Sbjct: 354 VVNALFWIIFLDAVFSIVFSKLNI 377 >gi|254524872|ref|ZP_05136927.1| ABC transporter permease [Stenotrophomonas sp. SKA14] gi|219722463|gb|EED40988.1| ABC transporter permease [Stenotrophomonas sp. SKA14] Length = 370 Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 123/366 (33%), Positives = 204/366 (55%), Gaps = 21/366 (5%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + R +G W + + + A +V+ + + + +D + I ++D+ G ++ + H Sbjct: 18 LIRLSGTW-TLKTALAAAEVLRGVPEKLTG----IDATGIEQMDSAG---VLQVLRVAH- 68 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQ-KPQRSF-FYNSFKNL--HYHIGKKIVKFIN 123 + L + H Q + T + ++ KP+R F + + L H +K + Sbjct: 69 RADLGEDALHFRQDHQALVCTIEEVADDRPKPKRDFGVLAALERLGVSVHATGHNIKAL- 127 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 CS LG + +F+ L + + QM VG+ VP+V L+S++ GAVIA Sbjct: 128 --CS---FLGENLVKAARLVKEPRRFR--LTATVHQMEQVGLDAVPLVALLSYLVGAVIA 180 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 G+ L FGAEI+ ++L++I LRE VLLTA+++AGR+ SA A+IG+MK EEIDA Sbjct: 181 FLGSTILRDFGAEIYVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKAREEIDA 240 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +RT+GLD V +L+ PR+ AL+++LPLLT +A + + G V DIP ++ +R H Sbjct: 241 MRTLGLDPVDLLVLPRLLALLVTLPLLTFIAMVAGLAGGITVGAFDLDIPPQMYIARMHE 300 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 T + ++ GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VIIID+ Sbjct: 301 TMEVRHMLVGLSKAPVFALVIGLIGCLEGLKVEGTAQSVGERTTSSVVQTISLVIIIDAF 360 Query: 364 FAIFYF 369 A+++ Sbjct: 361 AALWFM 366 >gi|315639122|ref|ZP_07894289.1| ABC superfamily ATP binding cassette transporter, ABC protein [Campylobacter upsaliensis JV21] gi|315480826|gb|EFU71463.1| ABC superfamily ATP binding cassette transporter, ABC protein [Campylobacter upsaliensis JV21] Length = 368 Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 117/372 (31%), Positives = 186/372 (50%), Gaps = 30/372 (8%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFMEKYHGKI 69 G W + IAD + K Q+ I+D + ID G + Y ++K Sbjct: 16 GIWDK---NSIADFKITDFIKKFQT-QCILDFHHLEFIDMAGVRFFLALEYELQKRGIVS 71 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 + +S + LF L +++ +K K H+ + F+N Sbjct: 72 QRVHLSEKFDALFELCEKNYQRILKEPKK------------HFDTAEL---FVNLGVLSL 116 Query: 130 HILGLV---ISNTGEFCASSYKF--KGFLLSLIRQMYYV---GVSGVPVVILISFVTGAV 181 ++LG++ I GEF + +++ K I +Y++ + +P+VIL + + G V Sbjct: 117 NLLGILKQFICFVGEFFTAFFQYFKKPKAFRFIAFLYHIENSALKALPIVILTALLVGVV 176 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A Q AFQL+QFGA IF +DL+ I RE+ L+ A++IAGRS S+ A+IG MKI +EI Sbjct: 177 LAYQAAFQLAQFGANIFIVDLVGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEI 236 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 A+ TMG +I PR+ AL++++PL+ +++F +I G +V DI F F RF Sbjct: 237 AAMNTMGFSTFHFIIIPRVIALVVAMPLIVAVSDFVSIFGGMMVAHLNLDINFIEFLRRF 296 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 L ++ GLIKAP IG++A G V + S+G T VV +I VI D Sbjct: 297 KEAVDLKHVIIGLIKAPIFGFLIGLIACFRGLEVKHTTQSIGIYTTKSVVNAIFWVIAFD 356 Query: 362 SLFAIFYFAIGI 373 +LF++ +GI Sbjct: 357 ALFSVILTQMGI 368 >gi|294338723|emb|CAZ87055.1| putative ABC-type transport system, permease component [Thiomonas sp. 3As] Length = 380 Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 103/364 (28%), Positives = 191/364 (52%), Gaps = 20/364 (5%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66 V R G W + ++ + + A + + D++ T +DT GA L++ M ++ Sbjct: 29 VCRLQGAWNAQGLAREPNTHLPAGTRHVTLDASA------TTLDTPGALLLVRSMAQWQS 82 Query: 67 --GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + G+S +QL L+ R++ P L IG+ + +++ Sbjct: 83 AGATVDASGLSPPQQQLLDLV----RQRALALPPAARRL-----GLLGDIGRATLIALDE 133 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + +G ++ ++ + +I ++ G+ + ++ L+SF+ G V+A Sbjct: 134 LRALLAFVGELVWRGAPLLLQPWRVRWR--EVIHEIDAAGLRAIGIIGLLSFLIGMVMAY 191 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q L+ +GA I ++L+SI+ LRE+G LLTA+++AGR+GS+ A+IG+M+I EE+DA+ Sbjct: 192 QAGATLATYGANILIVNLVSIITLRELGPLLTAILVAGRTGSSYTAQIGTMRITEEVDAL 251 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R +GL +L+ P++ AL+I+LPLL + A+ + G +V Y +P + + +R Sbjct: 252 RALGLSPFEMLVLPKVIALVITLPLLALFADVMGLAGGGVVAAVGYGVPLSEYVARIPQV 311 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L + GL+KAP A I +V +G V + ++G+ T VVQ+I +VI+ID+ F Sbjct: 312 VGLKTLVLGLVKAPVFAVVIALVGCMQGLRVAGSAAAVGRATTVSVVQAIFLVIVIDASF 371 Query: 365 AIFY 368 ++ Y Sbjct: 372 SVLY 375 >gi|154149262|ref|YP_001406165.1| ABC transport system permease [Campylobacter hominis ATCC BAA-381] gi|153805271|gb|ABS52278.1| ABC transport system permease [Campylobacter hominis ATCC BAA-381] Length = 367 Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 89/205 (43%), Positives = 124/205 (60%) Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G+ V +V L +F+ G V+A G+ L+QFGA I+ ID+M +L LREI L+ A++IAGR Sbjct: 158 GIDAVFIVSLTAFLVGIVLAYIGSDMLAQFGASIYIIDIMGMLTLREIAPLIAAIVIAGR 217 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 S S+ A+IG MKI EEIDA++TMG D L PRI A+II P + LA+ +I Sbjct: 218 SASSFTAQIGVMKITEEIDAMKTMGFDPFYFLCMPRILAMIIITPFVIFLADAVSIFSQM 277 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 IV Y +I FA + RF ST + + G++KAPF I IV GF V + S+G Sbjct: 278 IVCDAYLEISFADYLERFKSTIEIRHFLVGIVKAPFFGAIIAIVGCLRGFEVKNDTQSIG 337 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFY 368 + T VV +I VI +D+ FA+ + Sbjct: 338 EYTTISVVNAIFWVIALDAFFAVMF 362 >gi|261838741|gb|ACX98507.1| ABC transport system permease [Helicobacter pylori 51] Length = 377 Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 103/337 (30%), Positives = 177/337 (52%), Gaps = 15/337 (4%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLIS--FTHRKKIKNQKPQ 99 VD S +ID + + + + I+L VS + ++ + ++++K Sbjct: 51 VDFSGCQKIDFVFGMFLFDLVRERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAG 110 Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 + + + + +GK IV+ N + + G+++ F S + K F ++ + Sbjct: 111 KKY-----ELMITKLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL-- 160 Query: 160 MYYVGVSG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 +Y++ SG +PV IL F+ G +A QGA QL GA + S+++ + L LREIG + Sbjct: 161 LYHINESGFKVLPVSILTVFIVGFAVALQGALQLQDLGAPLMSVEMTAKLALREIGPFIL 220 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 +++AGRS S+ A+IG MKI EE+DA++TMG + L+ PR+ AL+I LPLL +A+ Sbjct: 221 TLVVAGRSASSFTAQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADA 280 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 AI+G I D+ F + R H T + G++KAPF AI +V GF V Sbjct: 281 FAILGGMFAIKYQLDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVK 340 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + S+G+ T VV ++ +I +D++F+I + + I Sbjct: 341 GDTESIGRLTTISVVNALFWIIFLDAVFSIIFSKLNI 377 >gi|15612424|ref|NP_224077.1| hypothetical protein jhp1359 [Helicobacter pylori J99] gi|4155971|gb|AAD06935.1| putative [Helicobacter pylori J99] Length = 377 Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 93/264 (35%), Positives = 148/264 (56%), Gaps = 8/264 (3%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---VP 169 +GK +V+ N + + G+++ F S + K F +I +Y++ SG +P Sbjct: 119 KLGKSLVETYNTFLNAFNFCGMILFY---FIKSVFNPKRF--CIIPLLYHINESGFKVLP 173 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V IL F+ G +A QGA QL GA + S+++ + L LREIG + +++AGRS S+ Sbjct: 174 VSILTVFIVGFAVALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFT 233 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A+IG MKI EE+DA++TMG + L+ PR+ AL+I LPLL +A+ AI+G I Sbjct: 234 AQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQ 293 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 D+ F + R H T + G++KAPF AI +V GF V + S+G+ T Sbjct: 294 LDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTIS 353 Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373 VV ++ +I +D++F+I + + I Sbjct: 354 VVNALFWIIFLDAIFSILFSKLNI 377 >gi|210135633|ref|YP_002302072.1| ABC transporter permease protein [Helicobacter pylori P12] gi|210133601|gb|ACJ08592.1| ABC transporter permease protein [Helicobacter pylori P12] Length = 377 Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 95/271 (35%), Positives = 151/271 (55%), Gaps = 13/271 (4%) Query: 111 HYHI-----GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 HY + GK IV+ N + + G+++ F S + K F ++ + +Y++ Sbjct: 112 HYELLITKLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LYHINE 166 Query: 166 SG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 SG +PV IL F+ G +A QGA QL GA + S+++ + L LREIG + +++AG Sbjct: 167 SGFKVLPVSILTVFIVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAG 226 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 RS S+ A+IG MKI EE+DA++TMG + L+ PR+ AL+I LPLL +A+ AI+G Sbjct: 227 RSASSFTAQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGG 286 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 I D+ F + R H T + G++KAPF AI +V GF V + S+ Sbjct: 287 MFAIKYQLDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESI 346 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 G+ T VV ++ +I +D++F+I + + I Sbjct: 347 GRLTTISVVNALFWIIFLDAVFSIVFSKLNI 377 >gi|257459529|ref|ZP_05624638.1| ABC transport system permease [Campylobacter gracilis RM3268] gi|257442954|gb|EEV18088.1| ABC transport system permease [Campylobacter gracilis RM3268] Length = 367 Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 88/210 (41%), Positives = 130/210 (61%) Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G+ + +V L +F+ G V+A G+ LS+FGA I+ ID+M L LRE+ L+ A++IAGR Sbjct: 158 GIDALFIVSLTAFLIGIVLAYIGSDMLSKFGASIYIIDIMGALTLREVAPLIAAIVIAGR 217 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 S S+ A+IG MKI EEIDA+RTMG D L PRI A+++ +PL+ +A+ +I Sbjct: 218 SASSFTAQIGVMKITEEIDAMRTMGFDPFYFLAMPRIIAMVLIMPLVIFIADSVSIFAQM 277 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 IV Y DI F+ + RF ++ L + G+IKAPF I I+ GF V ++ S+G Sbjct: 278 IVCDAYLDIAFSDYLDRFKASVELRHFLVGMIKAPFFGAFIAIIGCMRGFEVKGNTQSIG 337 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + T VV +I VI ID++FA+ + IG+ Sbjct: 338 EYTTISVVNAIFWVIAIDAVFAVLFSEIGL 367 >gi|217031805|ref|ZP_03437308.1| hypothetical protein HPB128_199g13 [Helicobacter pylori B128] gi|216946457|gb|EEC25059.1| hypothetical protein HPB128_199g13 [Helicobacter pylori B128] Length = 367 Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 93/264 (35%), Positives = 150/264 (56%), Gaps = 8/264 (3%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---VP 169 +GK IV+ N + + G+++ F S + K F ++ + +Y++ SG +P Sbjct: 109 KLGKSIVETYNTFLNAFNFCGMILF---YFIKSVFNPKRFCITPL--LYHINESGFKVLP 163 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V IL F+ G +A QG QL GA + S+++ + L LREIG + +++AGRS S+ Sbjct: 164 VSILTVFIVGFAVALQGVLQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFT 223 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A+IG MKI EE+DA++TMG + L+ PR+ AL+I LPLL +A+ AI+G I Sbjct: 224 AQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQ 283 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 D+ F+ + RFH T + G++KAPF AI +V GF V + S+G+ T Sbjct: 284 LDLGFSSYIDRFHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTIS 343 Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373 VV ++ +I +D++F+I + + I Sbjct: 344 VVNALFWIIFLDAVFSIVFSKLNI 367 >gi|207091861|ref|ZP_03239648.1| hypothetical protein HpylHP_01931 [Helicobacter pylori HPKX_438_AG0C1] Length = 377 Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 95/271 (35%), Positives = 151/271 (55%), Gaps = 13/271 (4%) Query: 111 HYHI-----GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 HY + GK IV+ N + + G+++ F S + K F ++ + +Y++ Sbjct: 112 HYELLITKLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LYHINE 166 Query: 166 SG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 SG +PV IL F+ G +A QGA QL GA + S+++ + L LREIG + +++AG Sbjct: 167 SGFKVLPVSILTVFIVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAG 226 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 RS S+ A+IG MKI EE+DA++TMG + L+ PR+ AL+I LPLL +A+ AI+G Sbjct: 227 RSASSFTAQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGG 286 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 I D+ F + R H T + G++KAPF AI +V GF V + S+ Sbjct: 287 MFAIKYQLDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESI 346 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 G+ T VV ++ +I +D++F+I + + I Sbjct: 347 GRLTTISVVNALFWIIFLDAVFSIVFSKLNI 377 >gi|154173911|ref|YP_001408228.1| stas domain-containing protein [Campylobacter curvus 525.92] gi|112802195|gb|EAT99539.1| stas domain protein [Campylobacter curvus 525.92] Length = 368 Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 84/205 (40%), Positives = 130/205 (63%) Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 GV+ V +V L +F+ G V+A G+ L+ FGA IF +++M +L LRE+ L+ A+++AGR Sbjct: 159 GVNAVFIVSLTAFLIGVVLAYLGSAMLANFGASIFIVEIMGMLTLREVAPLIAAIVVAGR 218 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 S S+ A+IG+MK+ EEIDA++TMG + L+ PRI A+++SLP++ +A+ +I+G Sbjct: 219 SASSFTAQIGAMKLTEEIDAMKTMGFEPFNFLVLPRIIAMVLSLPIIIFIADAISILGQM 278 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 ++ DI FA + SRF L + G+IKAPF I I+ GF V ++ SLG Sbjct: 279 LICQGVLDISFADYLSRFKDMVELRHFAVGMIKAPFFGAIIAIIGCMRGFDVNSNAQSLG 338 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFY 368 + T VV +I VI +D+ FAI + Sbjct: 339 EMTTISVVNAIFWVIALDAFFAIIF 363 >gi|317178170|dbj|BAJ55959.1| hypothetical protein HPF16_1362 [Helicobacter pylori F16] Length = 377 Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 102/337 (30%), Positives = 178/337 (52%), Gaps = 15/337 (4%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLIS--FTHRKKIKNQKPQ 99 VD S +ID + + +++ I+L VS + ++ + ++++K Sbjct: 51 VDFSGCQKIDFVFGMFLFDLVKERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKEG 110 Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 + + + + +GK IV+ N + + G+++ F S + K F ++ + Sbjct: 111 KKY-----ELMITKLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL-- 160 Query: 160 MYYVGVSG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 +Y++ SG +P+ IL F+ G +A QGA QL GA + S+++ + L LREIG + Sbjct: 161 LYHINESGFKVLPISILTVFIVGFAVALQGALQLQDLGAPLMSVEMTAKLALREIGPFIL 220 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 +++AGRS S+ A+IG MKI EE+DA++TMG + L+ PR+ AL+I LPLL +A+ Sbjct: 221 TLVVAGRSASSFTAQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADA 280 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 AI+G I D+ F + R H T + G++KAPF AI +V GF V Sbjct: 281 FAILGGMFAIKYQLDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVK 340 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + S+G+ T VV ++ +I +D++F+I + + I Sbjct: 341 GDTESIGRLTTISVVNALFWIIFLDAVFSIIFSKLNI 377 >gi|297380678|gb|ADI35565.1| conserved hypothetical protein [Helicobacter pylori v225d] Length = 377 Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 93/264 (35%), Positives = 149/264 (56%), Gaps = 8/264 (3%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---VP 169 +GK IV+ N + + G+++ F S + K F ++ + +Y++ SG +P Sbjct: 119 KLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LYHINESGFKVLP 173 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V IL F+ G +A QGA QL GA + S+++ + L LREIG + +++AGRS S+ Sbjct: 174 VSILTVFIVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFT 233 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A+IG MKI EE+DA++TMG + L+ PR+ AL+I LPLL +A+ AI+G I Sbjct: 234 AQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQ 293 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 D+ F + R H T + G++KAPF AI +V GF V + S+G+ T Sbjct: 294 LDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTIS 353 Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373 VV ++ +I +D++F+I + + I Sbjct: 354 VVNALFWIIFLDAVFSIIFSKLNI 377 >gi|301060039|ref|ZP_07200913.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300445918|gb|EFK09809.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 376 Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 103/384 (26%), Positives = 187/384 (48%), Gaps = 28/384 (7%) Query: 1 MSENGITVFRFAGNWKS----PEISEIADDVVMAIN-KSIQSDSAIVDLSAITEIDTIGA 55 ++E+ GNW+ P + D + + K I+ D+ TE+ + + Sbjct: 10 LTESETLTVHLQGNWQMESGVPSSGALLDQLDQHSSIKRIEFDA--------TELGSWDS 61 Query: 56 ELIMYFME------KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 L ++F E + K++ G+ + QL L + +K+ Q R+ F+ Sbjct: 62 SLPIFFFEISKLAVEKKTKVQKDGLPAGVRQLIDLATAVPKKEDARQTVSRAGFFG---- 117 Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 H+G +++ F + +G +F+ L + Q G VP Sbjct: 118 ---HVGSEVIDFTKSAGELITFIGAAFEAFVRMITGRARFRATDLGIFLQ--EAGAQAVP 172 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +V LISF+ G ++A G QLS FGA+++ DL+ I +RE+G ++T +++AGR+G+A Sbjct: 173 IVSLISFLVGLILAFVGILQLSMFGAQVYVADLVGIAMVREMGAIMTGIIMAGRTGAAYA 232 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A++G+M++NEEIDA+ T+ + + L+ PR+ AL + +PLL + A+ I+G ++V Sbjct: 233 AQLGTMQVNEEIDALETLAIPPMEFLVLPRMVALAVMMPLLVLYADLMGILGGALVAVGM 292 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 Y I V+ SR S TL+++F GL + + G G ++++G T+ Sbjct: 293 YKIDIIVYLSRTKSAVTLSDLFIGLFMGAVFGVLVALSGCLRGIQCGRSASAVGDATTSA 352 Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373 VV I +II ++ + +GI Sbjct: 353 VVTGIVAIIIATAVITVLCSILGI 376 >gi|261840140|gb|ACX99905.1| hypothetical protein HPKB_1368 [Helicobacter pylori 52] Length = 377 Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 102/337 (30%), Positives = 178/337 (52%), Gaps = 15/337 (4%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLIS--FTHRKKIKNQKPQ 99 VD S +ID + + +++ I+L VS + ++ + ++++K Sbjct: 51 VDFSGCQKIDFVFGMFLFDLVKERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAG 110 Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 + + + + +GK IV+ N + + G+++ F S + K F ++ + Sbjct: 111 KKY-----ELMITKLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL-- 160 Query: 160 MYYVGVSG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 +Y++ SG +P+ IL F+ G +A QGA QL GA + S+++ + L LREIG + Sbjct: 161 LYHINESGFKVLPISILTVFIVGFAVALQGALQLQDLGAPLMSVEMTAKLALREIGPFIL 220 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 +++AGRS S+ A+IG MKI EE+DA++TMG + L+ PR+ AL+I LPLL +A+ Sbjct: 221 TLVVAGRSASSFTAQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADA 280 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 AI+G I D+ F + R H T + G++KAPF AI +V GF V Sbjct: 281 FAILGGMFAIKYQLDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVK 340 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + S+G+ T VV ++ +I +D++F+I + + I Sbjct: 341 GDTESIGRLTTISVVNALFWIIFLDAVFSIIFSKLNI 377 >gi|317014880|gb|ADU82316.1| hypothetical protein HPGAM_07715 [Helicobacter pylori Gambia94/24] Length = 377 Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 92/264 (34%), Positives = 149/264 (56%), Gaps = 8/264 (3%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---VP 169 +GK +V+ N + + G+++ F S + K F ++ + +Y++ SG +P Sbjct: 119 KLGKSLVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LYHINESGFKVLP 173 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V IL F+ G +A QGA QL GA + S+++ + L LREIG + +++AGRS S+ Sbjct: 174 VSILTVFIVGFAVALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFT 233 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A+IG MKI EE+DA++TMG + L+ PR+ AL+I LPLL +A+ AI+G I Sbjct: 234 AQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQ 293 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 D+ F + R H T + G++KAPF AI +V GF V + S+G+ T Sbjct: 294 LDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTIS 353 Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373 VV ++ +I +D++F+I + + I Sbjct: 354 VVNALFWIIFLDAIFSILFSKLNI 377 >gi|188528238|ref|YP_001910925.1| hypothetical protein HPSH_07510 [Helicobacter pylori Shi470] gi|188144478|gb|ACD48895.1| hypothetical protein HPSH_07510 [Helicobacter pylori Shi470] gi|308064225|gb|ADO06112.1| putative ABC transport system permease protein [Helicobacter pylori Sat464] Length = 377 Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 93/264 (35%), Positives = 149/264 (56%), Gaps = 8/264 (3%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---VP 169 +GK IV+ N + + G+++ F S + K F ++ + +Y++ SG +P Sbjct: 119 KLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LYHINESGFKVLP 173 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V IL F+ G +A QGA QL GA + S+++ + L LREIG + +++AGRS S+ Sbjct: 174 VSILTVFIVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFT 233 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A+IG MKI EE+DA++TMG + L+ PR+ AL+I LPLL +A+ AI+G I Sbjct: 234 AQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQ 293 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 D+ F + R H T + G++KAPF AI +V GF V + S+G+ T Sbjct: 294 LDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTIS 353 Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373 VV ++ +I +D++F+I + + I Sbjct: 354 VVNALFWIIFLDAVFSIIFSKLNI 377 >gi|317182671|dbj|BAJ60455.1| hypothetical protein HPF57_1381 [Helicobacter pylori F57] Length = 377 Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 102/337 (30%), Positives = 178/337 (52%), Gaps = 15/337 (4%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLIS--FTHRKKIKNQKPQ 99 VD S +ID + + +++ I+L VS + ++ + ++++K Sbjct: 51 VDFSGCQKIDFVFGMFLFDLVKERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAG 110 Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 + + + + +GK IV+ N + + G+++ F S + K F ++ + Sbjct: 111 KKY-----ELMITKLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL-- 160 Query: 160 MYYVGVSG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 +Y++ SG +P+ IL F+ G +A QGA QL GA + S+++ + L LREIG + Sbjct: 161 LYHINESGFKVLPISILTVFIVGFAVALQGALQLQDLGAPLMSVEMTAKLALREIGPFIL 220 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 +++AGRS S+ A+IG MKI EE+DA++TMG + L+ PR+ AL+I LPLL +A+ Sbjct: 221 TLVVAGRSASSFTAQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADA 280 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 AI+G I D+ F + R H T + G++KAPF AI +V GF V Sbjct: 281 FAILGGMFAIKYQLDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVK 340 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + S+G+ T VV ++ +I +D++F+I + + I Sbjct: 341 GDTESIGRLTTISVVNALFWIIFLDAVFSIIFSKLNI 377 >gi|315453380|ref|YP_004073650.1| ABC transport system permease protein (pseudogene) [Helicobacter felis ATCC 49179] gi|315132432|emb|CBY83060.1| putative ABC transport system permease protein (pseudogene) [Helicobacter felis ATCC 49179] Length = 369 Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 117/376 (31%), Positives = 188/376 (50%), Gaps = 38/376 (10%) Query: 13 GNW--KSPEISEIADDVVMAINKSIQSDSAI--VDLSAITEIDTIGAELIMYFMEK---- 64 GNW K+P ++ + K +++ I VD + +D + L+ + + Sbjct: 17 GNWDFKTPA------QTLLRLEKLLKNAPPIRAVDFREVERLDFVFLMLLYDLLGRKKPA 70 Query: 65 ------YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 Y+ + L+ V +++ S++S H K K N L G+ I Sbjct: 71 ILNANAYNAHV-LEVVQHWVKEDPSILSREHSKPPK---------INPLNKL----GQSI 116 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLS-LIRQMYYVGVSGVPVVILISFV 177 V F N + + G+V+ G + K K L+ LI ++ G +PV IL FV Sbjct: 117 VDFFNTMLNTFNFCGMVLYFLGR---AIIKPKTLCLTPLIHHIHESGFKVLPVSILTVFV 173 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G IA QGA QL Q G + SI++ + L LRE+G + +++AGRS S+ A+IG MKI Sbjct: 174 VGFAIALQGAIQLQQLGFPLMSIEMTAKLALREMGPFILTLVVAGRSASSFTAQIGVMKI 233 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EE+DA+ TMGL L+ PR+ AL+I +PL+ +A+ A++G + I + F + Sbjct: 234 TEELDAMHTMGLSPFAWLVLPRVLALVIVMPLMVFIADAFALLGTMVAIKYQLGVTFNHY 293 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 +R H L++ F GLIKAPF AI IV GF V + S+G T VV ++ + Sbjct: 294 IARLHENVGLSHFFVGLIKAPFWGFAIAIVGCMRGFEVKGDTESIGTLTTISVVNALFWI 353 Query: 358 IIIDSLFAIFYFAIGI 373 I +++LF++ + + I Sbjct: 354 IFLNALFSVIFSKLNI 369 >gi|315585855|gb|ADU40236.1| ABC superfamily ATP binding cassette transporter permease protein [Helicobacter pylori 35A] Length = 377 Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 92/264 (34%), Positives = 149/264 (56%), Gaps = 8/264 (3%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---VP 169 +GK IV+ N + + G+++ F S + K F ++ + +Y++ SG +P Sbjct: 119 KLGKSIVETYNTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LYHINESGFKVLP 173 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 + IL F+ G +A QGA QL GA + S+++ + L LREIG + +++AGRS S+ Sbjct: 174 ISILTVFIVGFAVALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFT 233 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A+IG MKI EE+DA++TMG + L+ PR+ AL+I LPLL +A+ AI+G I Sbjct: 234 AQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQ 293 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 D+ F + R H T + G++KAPF AI +V GF V + S+G+ T Sbjct: 294 LDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTIS 353 Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373 VV ++ +I +D++F+I + + I Sbjct: 354 VVNALFWIIFLDAVFSIIFSKLNI 377 >gi|54294946|ref|YP_127361.1| hypothetical protein lpl2025 [Legionella pneumophila str. Lens] gi|53754778|emb|CAH16265.1| hypothetical protein lpl2025 [Legionella pneumophila str. Lens] Length = 374 Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 109/317 (34%), Positives = 176/317 (55%), Gaps = 18/317 (5%) Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 ++K + +I+L S +Q+ LI + ++ + Q P S + + Y IGK Sbjct: 71 LKKRNNQIELVNFSDSQQQMLELIE-SKQEILSYQLPAVSK-----EGVLYQIGK----- 119 Query: 122 INDSCSQAH-ILGLVIS----NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 +S ++ H + GL+I +T F A +Y + L S++ + G+ +P++ L+SF Sbjct: 120 --ESENKLHQVDGLIILIGDLSTRLFEAFAYWRRFHLPSIVSVIDSAGLKALPIIGLLSF 177 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 + G V+A Q QL +GA IF L + RE G L+TA+++AGR+ S+ A+IGSMK Sbjct: 178 LIGVVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMK 237 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 INEE+DAI TMGL +L+ P++ L+I PLL A+ +I GA I+ +I F Sbjct: 238 INEEVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFED 297 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 F SR + L + GL KAP + I +V +GF V ++S+G + T VVQ++ + Sbjct: 298 FLSRLRDSVGLNQMMLGLYKAPAFSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFL 357 Query: 357 VIIIDSLFAIFYFAIGI 373 +II D+ F+I Y +G+ Sbjct: 358 IIIADAAFSIAYSWMGL 374 >gi|190572714|ref|YP_001970559.1| putative ABC transporter permease [Stenotrophomonas maltophilia K279a] gi|190010636|emb|CAQ44245.1| putative permease component of ABC transporter protein [Stenotrophomonas maltophilia K279a] Length = 373 Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 121/366 (33%), Positives = 201/366 (54%), Gaps = 21/366 (5%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66 + R +G W + + + A +V+ + ++ +D + I ++D+ G ++ + Sbjct: 21 LIRLSGTW-TLKTALAAAEVLRGVPDTLTG----IDATGIEKMDSAGVLQVLRVAHRADL 75 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF-FYNSFKNL--HYHIGKKIVKFIN 123 G+ LQ H +L+ +P+R F + + L H +K + Sbjct: 76 GEDALQFRPDH----QALVCTIEEVADDRPRPKRDFGVLAALERLGVSVHATGHNIKAL- 130 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 CS LG + +F+ L + + QM VG+ VP+V L+S++ GAVIA Sbjct: 131 --CS---FLGENLVKAARLVKEPRRFR--LTATVHQMEQVGLDAVPLVALLSYLVGAVIA 183 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 G+ L FGAEI+ ++L++I LRE VLLTA+++AGR+ SA A+IG+MK EEIDA Sbjct: 184 FLGSTILRDFGAEIYVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKAREEIDA 243 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +RT+GLD + +L+ PR+ AL+++LPLLT +A + + G V DIP ++ +R H Sbjct: 244 MRTLGLDPIDLLVLPRLLALLVTLPLLTFIAMIAGLAGGITVGAFDLDIPPQMYIARMHE 303 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 T + ++ GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VIIID+ Sbjct: 304 TMEVRHMLVGLSKAPVFALVIGLIGCLEGLKVEGTAQSVGERTTSSVVQTISLVIIIDAF 363 Query: 364 FAIFYF 369 A+++ Sbjct: 364 AALWFM 369 >gi|109948194|ref|YP_665422.1| putative ABC transport system permease protein [Helicobacter acinonychis str. Sheeba] gi|109715415|emb|CAK00423.1| putative ABC transport system permease protein [Helicobacter acinonychis str. Sheeba] Length = 377 Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 93/264 (35%), Positives = 151/264 (57%), Gaps = 8/264 (3%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---VP 169 +GK IV+ N + + G+++ F + K F + + +Y++ SG +P Sbjct: 119 KMGKSIVETYNTFLNALNFCGMILFY---FIKGVFNPKRFCFTPL--VYHINESGFKVLP 173 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V IL F+ G I QGA QL G + ++++ + L LREIG + +++AGRS S+ Sbjct: 174 VSILTVFIVGFAITLQGALQLQDMGVPLTTVEMTAKLALREIGPFILTLVVAGRSASSFT 233 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A+IG MKI EE+DA++TMG + L+ PR+ ALII LPL+ +A+ AI+G+ + Sbjct: 234 AQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALIIVLPLMVFIADAIAILGSMCAVKYQ 293 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 D+ F+ + RFHST T + + G+IKAPF AI +V GF V + S+G+ T Sbjct: 294 LDLTFSSYVDRFHSTVTWNHFWVGIIKAPFWGFAIAVVGCMRGFEVRGDTESVGRLTTIS 353 Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373 VV ++ +I +++ F+I + +GI Sbjct: 354 VVNALFWIIFLNATFSIVFSRLGI 377 >gi|307610778|emb|CBX00391.1| hypothetical protein LPW_21111 [Legionella pneumophila 130b] Length = 374 Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 109/317 (34%), Positives = 175/317 (55%), Gaps = 18/317 (5%) Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 ++K + +I+L S +Q+ LI + + + Q P S + + Y IGK Sbjct: 71 LKKRNNQIELVNFSDSQQQMLELIE-SKQDILSYQLPAVSK-----EGVLYQIGK----- 119 Query: 122 INDSCSQAH-ILGLVIS----NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 +S ++ H + GL+I +T F A +Y + L S++ + G+ +P++ L+SF Sbjct: 120 --ESENKLHQVDGLIILIGDLSTRLFEAFAYWRRFHLPSIVSVIDSAGLKALPIIGLLSF 177 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 + G V+A Q QL +GA IF L + RE G L+TA+++AGR+ S+ A+IGSMK Sbjct: 178 LIGVVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMK 237 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 INEE+DAI TMGL +L+ P++ L+I PLL A+ +I GA I+ +I F Sbjct: 238 INEEVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFED 297 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 F SR + L + GL KAP + I +V +GF V ++S+G + T VVQ++ + Sbjct: 298 FLSRLRDSVGLNQMMLGLYKAPAFSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFL 357 Query: 357 VIIIDSLFAIFYFAIGI 373 +II D+ F+I Y +G+ Sbjct: 358 IIIADAAFSIAYSWMGL 374 >gi|315498539|ref|YP_004087343.1| hypothetical protein Astex_1526 [Asticcacaulis excentricus CB 48] gi|315416551|gb|ADU13192.1| protein of unknown function DUF140 [Asticcacaulis excentricus CB 48] Length = 377 Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 110/365 (30%), Positives = 182/365 (49%), Gaps = 14/365 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFMEKYH 66 V G+W + + + + + +++S SA+ V+ + DT GA Y + Sbjct: 18 VVSLTGDWTAIGLRDAGER----LKSALKSASAVRVETDDLKGFDTAGA----YALRTAL 69 Query: 67 GKIKLQGVSTHIEQL---FSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 G + + +H +L + LI + ++ QK + +G+ N Sbjct: 70 GALGDDALFSHDPRLSAVYELIRDIQPQVVEAQKKTAQQKAHPIIAELAQLGRNTEDVFN 129 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 D +G +I + + + L+ QM G + VV + +F GAVIA Sbjct: 130 DLRDLNVFIGQLIVTAFMSLVTPGRIR--WTPLVAQMQQAGFGALMVVCVTNFFVGAVIA 187 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 G QL QFGA +F+++L+ I LRE G ++ AV+IAGRS S+ AEIG+MK+N+EI A Sbjct: 188 FLGILQLQQFGAAVFAVELIGISVLREFGPVIAAVLIAGRSASSFTAEIGAMKMNQEISA 247 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R MG++ LI PR+ AL++++PL+T + + ++G +V+W F R Sbjct: 248 MRVMGINPFDALIFPRLAALVLTMPLITFAGSMAGLLGGFVVVWAQLGYGPHFFSIRMTE 307 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 N F G+IK P A AI I+ + G V SLG++VT VVQ+I +I+ID++ Sbjct: 308 YVPFVNFFVGMIKVPLFAIAITIIGCRLGMNVTEDVISLGRQVTRAVVQAIFTIILIDAI 367 Query: 364 FAIFY 368 A+ + Sbjct: 368 VAMMF 372 >gi|15598407|ref|NP_251901.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|9949331|gb|AAG06599.1|AE004744_14 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1] Length = 381 Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 87/204 (42%), Positives = 127/204 (62%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 L+ + G+ VP++ L++F+ GAVIA GA L+ FGA I++++L+ LRE VL Sbjct: 163 PLVANIEKSGLDAVPIIALLTFLVGAVIAFLGATVLANFGATIYTVNLVVFSFLREFAVL 222 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 LTA+++AGR+ SA A+IGSMK NEEIDAIR +GL+ + +L+ PR+ AL++SLP+LT + Sbjct: 223 LTAILMAGRTASAFTAQIGSMKANEEIDAIRALGLNPIELLVLPRVLALLVSLPMLTFVG 282 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 I+G V DIP A+F S + + G+ KAP A I ++ EGF Sbjct: 283 MLCGIVGGMTVCAWTLDIPPAMFLSIMEDGIGVQHFLVGISKAPLFAFLIAVIGCLEGFK 342 Query: 335 VGVHSNSLGKKVTTCVVQSISIVI 358 V + S+G+ TT VV SI +VI Sbjct: 343 VSGSAQSVGEHTTTSVVHSIFVVI 366 >gi|52842264|ref|YP_096063.1| ABC transporter, permease [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629375|gb|AAU28116.1| ABC transporter, permease [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 374 Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 109/317 (34%), Positives = 175/317 (55%), Gaps = 18/317 (5%) Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 ++K + +I+L S +Q+ LI + + + Q P S + + Y IGK Sbjct: 71 LKKRNNQIELVNFSDSQQQMLELIE-SKQDILSYQLPAVSK-----EGVLYQIGK----- 119 Query: 122 INDSCSQAH-ILGLVIS----NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 +S ++ H + GL+I +T F A +Y + L S++ + G+ +P++ L+SF Sbjct: 120 --ESENKLHQVDGLIILIGDLSTRLFEAFAYWRRFHLPSIVSVIDSAGLKALPIIGLLSF 177 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 + G V+A Q QL +GA IF L + RE G L+TA+++AGR+ S+ A+IGSMK Sbjct: 178 LIGVVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMK 237 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 INEE+DAI TMGL +L+ P++ L+I PLL A+ +I GA I+ +I F Sbjct: 238 INEEVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFED 297 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 F SR + L + GL KAP + I +V +GF V ++S+G + T VVQ++ + Sbjct: 298 FLSRLRDSVGLNQMMLGLYKAPAFSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFL 357 Query: 357 VIIIDSLFAIFYFAIGI 373 +II D+ F+I Y +G+ Sbjct: 358 IIIADAAFSIAYSWMGL 374 >gi|307720548|ref|YP_003891688.1| hypothetical protein Saut_0627 [Sulfurimonas autotrophica DSM 16294] gi|306978641|gb|ADN08676.1| protein of unknown function DUF140 [Sulfurimonas autotrophica DSM 16294] Length = 368 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 86/210 (40%), Positives = 129/210 (61%) Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 V + +V L SF+ G V A Q A+QL ++G IF +D+M I RE+ L+TA++IAGR Sbjct: 159 AVRALGIVALTSFLIGLVTAYQAAYQLQRYGGNIFIVDMMGISVFRELAPLITAIVIAGR 218 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 SGSA A+IG+MKI +EIDA+RTMG D L+ PRI ALII LP+L +++ A++G Sbjct: 219 SGSAYTAQIGAMKITQEIDAMRTMGFDPYTFLVLPRIIALIIMLPILIFVSDMMAMLGGI 278 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 IV D+ ++F +R + + + GL+K PF A I + + G V + S+G Sbjct: 279 IVADLSLDLIPSLFINRLSEVVAIKHFYVGLVKGPFFAFLIASIGIYRGLMVKDDTQSIG 338 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 T VV+S+ VI+ D++F+I + +GI Sbjct: 339 FNTTKSVVESLFAVIVCDAIFSIAFTNLGI 368 >gi|57505618|ref|ZP_00371545.1| conserved hypothetical integral membrane protein [Campylobacter upsaliensis RM3195] gi|57016165|gb|EAL52952.1| conserved hypothetical integral membrane protein [Campylobacter upsaliensis RM3195] Length = 377 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 119/379 (31%), Positives = 187/379 (49%), Gaps = 44/379 (11%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFMEKYHGKI 69 G W + IAD + K+ Q+ I+D + ID G + Y ++K Sbjct: 25 GIWDK---NSIADFKITDFIKNFQT-QCILDFHHLEFIDMAGVRFFLALEYELQKRGITS 80 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 + +S + LF L +++ +K K H+ + F+N Sbjct: 81 QRVHLSEKFDALFELCEKNYQRILKEPKK------------HFDTAEL---FVNLGVLSL 125 Query: 130 HILGLV---ISNTGEF------C---ASSYKFKGFLLSLIRQMYYV---GVSGVPVVILI 174 ++LG++ I GEF C +++F FL Y++ + +P+VIL Sbjct: 126 NLLGILKQFICFVGEFFTAFFQCFKKPKTFRFVAFL-------YHIENSALKALPIVILT 178 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 + + G V+A Q AFQL+QFGA IF +DL+ I RE+ L+ A++IAGRS S+ A+IG Sbjct: 179 ALLVGVVLAYQTAFQLAQFGANIFIVDLVGISATRELAPLIAAIVIAGRSASSYTAQIGV 238 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 MKI +EI A+ TMG +I PR+ AL++++PL+ +++F +I G +V DI F Sbjct: 239 MKITDEIAAMNTMGFSTFHFIIIPRVVALVVAMPLIVAVSDFVSIFGGMMVAHLNLDINF 298 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F RF L ++ GLIKAP IG++A G V + S+G T VV +I Sbjct: 299 IEFLRRFKEAVDLKHVIIGLIKAPIFGFLIGLIACFRGLEVKHTTQSIGIYTTKSVVNAI 358 Query: 355 SIVIIIDSLFAIFYFAIGI 373 VI D+LF++ +GI Sbjct: 359 FWVIAFDALFSVILTQMGI 377 >gi|254458263|ref|ZP_05071689.1| stas domain protein [Campylobacterales bacterium GD 1] gi|207085099|gb|EDZ62385.1| stas domain protein [Campylobacterales bacterium GD 1] Length = 357 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 86/210 (40%), Positives = 129/210 (61%) Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 + + ++ L SF+ G V+A Q A+QL +GA IF +D++ I LRE+ L+TA++IAGR Sbjct: 148 AIKALGIISLTSFLIGLVVAYQSAYQLKIYGANIFIVDMLGISMLRELAPLMTAIVIAGR 207 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 SGSA A+IG+MKI EE+DA+RTMG D L+ PRI AL+I++P+L +A+ ++ G Sbjct: 208 SGSAFTAQIGAMKITEELDAMRTMGFDPYIFLVLPRIIALMIAMPILIFVADIMSVFGGL 267 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 +V DI +F RF+ + F G+ K PF A I + + G V + S+G Sbjct: 268 LVAVIDLDISPQLFIDRFNDVVAAKHFFIGIGKGPFFAFIIASIGVYRGLEVKDDTQSIG 327 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 T VV+SI VII D++F+I + +GI Sbjct: 328 FNTTKSVVESIFAVIICDAIFSILFTNLGI 357 >gi|54297975|ref|YP_124344.1| hypothetical protein lpp2030 [Legionella pneumophila str. Paris] gi|53751760|emb|CAH13182.1| hypothetical protein lpp2030 [Legionella pneumophila str. Paris] Length = 374 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 107/317 (33%), Positives = 176/317 (55%), Gaps = 18/317 (5%) Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 ++K + +++L S +Q+ LI + ++ + Q P S + + Y IGK Sbjct: 71 LKKRNNQVELVNFSDSQQQMLELIE-SKQEILSYQLPAVSK-----EGVLYQIGK----- 119 Query: 122 INDSCSQAH-ILGLVIS----NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 +S ++ H + GL+I +T F A +Y + L S++ + G+ +P++ L+SF Sbjct: 120 --ESENKLHQVDGLIILIGDLSTRLFEAFAYWRRFHLPSIVSVIDSAGLKALPIIGLLSF 177 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 + G V+A Q QL +GA IF L + RE G L+TA+++AGR+ S+ A+IGSMK Sbjct: 178 LIGVVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMK 237 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 INEE+DAI TMGL +L+ P++ L+I PLL A+ +I GA I+ +I F Sbjct: 238 INEEVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFED 297 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 F +R + L + GL KAP + I +V +GF V ++S+G + T VVQ++ + Sbjct: 298 FLTRLRDSVGLNQMMLGLYKAPAFSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFL 357 Query: 357 VIIIDSLFAIFYFAIGI 373 +II D+ F+I Y +G+ Sbjct: 358 IIIADAAFSIAYSWMGL 374 >gi|317013234|gb|ADU83842.1| putative ABC transport system permease protein [Helicobacter pylori Lithuania75] Length = 377 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 94/271 (34%), Positives = 151/271 (55%), Gaps = 13/271 (4%) Query: 111 HYHI-----GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 HY + GK IV+ + + + G+++ F S + K F ++ + +Y++ Sbjct: 112 HYELLITKLGKSIVETYSTFLNAFNFCGMILFY---FIKSVFNPKRFCITPL--LYHINE 166 Query: 166 SG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 SG +PV IL F+ G +A QGA QL GA + S+++ + L LREIG + +++AG Sbjct: 167 SGFKVLPVSILTVFIVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAG 226 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 RS S+ A+IG MKI EE+DA++TMG + L+ PR+ AL+I LPLL +A+ AI+G Sbjct: 227 RSASSFTAQIGVMKITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGG 286 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 I D+ F + R H T + G++KAPF AI +V GF V + S+ Sbjct: 287 MFAIKYQLDLGFPSYIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESI 346 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 G+ T VV ++ +I +D++F+I + + I Sbjct: 347 GRLTTISVVNALFWIIFLDAVFSIVFSKLNI 377 >gi|152980330|ref|YP_001354931.1| ABC transport system permease protein [Janthinobacterium sp. Marseille] gi|151280407|gb|ABR88817.1| ABC transport system permease protein [Janthinobacterium sp. Marseille] Length = 374 Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 106/363 (29%), Positives = 182/363 (50%), Gaps = 13/363 (3%) Query: 12 AGNWK-SPEISEIADDVVMAINKSIQS-DSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 AG+W+ I A D + A + ++ D DLS I +D IGA+L+ K Sbjct: 22 AGSWQVRALIDPGAMDKLTATLRGVRKVDETRWDLSGIEALDYIGAQLLWNAWGKKRPP- 80 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 +L H E F + T ++K R + ++++ + ++ FI Sbjct: 81 QLTLAPQH-ESFFQRLEQTGTLQVKRPPQHRWYTFSAYLQFKLRMADHMLGFIT------ 133 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 ++G ++ + G F + G + +++ G + + L+ F+ G V++ A Q Sbjct: 134 -LIGQLVMDMGRFIRQPQR--GPWKEISANIFHTGYQALGITALVGFLIGVVLSYLSAQQ 190 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L QFG +IF ++++ + +RE+G LL A+++AGRSGS+I A++G M++ EE+DA+ MGL Sbjct: 191 LHQFGGDIFLVNILGMSVIRELGPLLAAILVAGRSGSSITAQLGVMRVTEELDAMLVMGL 250 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 LI P++ AL IS+PLL + + A+IG + F F LAN Sbjct: 251 PHGYRLIMPKVIALAISMPLLVVWTDAMALIGGMAAANVELGLSFKYFLRELPDAVPLAN 310 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + GL K I +VA G + ++ SLG+ T VV +I++VI+ D++FAI + Sbjct: 311 YWIGLGKGVVFGSLIALVACHFGLRIKPNTESLGEGTTISVVTAITVVILADAVFAIVFS 370 Query: 370 AIG 372 +G Sbjct: 371 GVG 373 >gi|148359621|ref|YP_001250828.1| ABC transporter permease [Legionella pneumophila str. Corby] gi|296107663|ref|YP_003619364.1| putative ABC transport system permease protein [Legionella pneumophila 2300/99 Alcoy] gi|148281394|gb|ABQ55482.1| ABC transporter, permease [Legionella pneumophila str. Corby] gi|295649565|gb|ADG25412.1| putative ABC transport system permease protein [Legionella pneumophila 2300/99 Alcoy] Length = 374 Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 107/317 (33%), Positives = 175/317 (55%), Gaps = 18/317 (5%) Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 ++K + +++L S +Q+ LI + + + Q P S + + Y IGK Sbjct: 71 LKKRNNQVELVNFSDSQQQMLELIE-SKQDILSYQLP-----IVSKEGVLYQIGK----- 119 Query: 122 INDSCSQAH-ILGLVIS----NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 +S ++ H + GL+I +T F A +Y + L S++ + G+ +P++ L+SF Sbjct: 120 --ESENKLHQVDGLIILIGDLSTRLFEAFAYWRRFHLPSIVSVIDSAGLKALPIIGLLSF 177 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 + G V+A Q QL +GA IF L + RE G L+TA+++AGR+ S+ A+IGSMK Sbjct: 178 LIGVVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMK 237 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 INEE+DAI TMGL +L+ P++ L+I PLL A+ +I GA I+ +I F Sbjct: 238 INEEVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFED 297 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 F +R + L + GL KAP + I +V +GF V ++S+G + T VVQ++ + Sbjct: 298 FLTRLRDSVGLNQMMLGLYKAPAFSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFL 357 Query: 357 VIIIDSLFAIFYFAIGI 373 +II D+ F+I Y +G+ Sbjct: 358 IIIADAAFSIAYSWMGL 374 >gi|223936767|ref|ZP_03628677.1| protein of unknown function DUF140 [bacterium Ellin514] gi|223894618|gb|EEF61069.1| protein of unknown function DUF140 [bacterium Ellin514] Length = 384 Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 107/373 (28%), Positives = 198/373 (53%), Gaps = 28/373 (7%) Query: 12 AGNWKS----PEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME-KYH 66 +G+WKS P++ +++ + +++SI++ S D+S +T + L+M E Sbjct: 29 SGDWKSGEVFPDVGGVSNK--LDVDESIRALS--FDVSKVTSWSSGLIGLVMRCRELAME 84 Query: 67 GKIKLQ--GVSTHIEQLFSL-ISFTHRKKIKNQKPQRSFFYN---SFKNLHYHIGKKIVK 120 KI G+ +++L L ++ +K ++ + + F L G++ +K Sbjct: 85 RKIAFDQSGLPQSVQRLIVLALAVPEKKDARSLQTRPGIFEKIGLGVLGLRRS-GEETLK 143 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 FI D C+ A + +++ + LI M G +P+V LI+F+ GA Sbjct: 144 FIGD-CTIAFL---------ALAKRKARYRWTEVWLI--MQQCGPDALPIVALINFLVGA 191 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 ++A GA QLS+FGA I+ DL+ I +RE+GV++ AV++ GR+G+A A++G+MK+N+E Sbjct: 192 ILAFVGAVQLSKFGAAIYVADLVGIATMREMGVIMMAVIMCGRTGAAFAAQLGTMKVNQE 251 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA +T+G+ + L+ PRI L + P+L I A+ AI+G +V + FA ++ Sbjct: 252 IDAYKTLGISPIEFLVMPRIMCLWLMFPVLCIFADLMAIVGGGVVALAMLNFSFAEYWQE 311 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + TL + F G++K+ + + + G G + ++G T+ VV I++++I Sbjct: 312 TVAAVTLTHFFIGIVKSFVFGVLVAMTSCLRGIQCGNDAAAVGLATTSAVVTGITVIVIA 371 Query: 361 DSLFAIFYFAIGI 373 D++FA+ GI Sbjct: 372 DAIFAVILNVFGI 384 >gi|134096148|ref|YP_001101223.1| putative transmembrane protein [Herminiimonas arsenicoxydans] gi|133740051|emb|CAL63102.1| Conserved hypothetical protein, putative ABC transporter [Herminiimonas arsenicoxydans] Length = 374 Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 104/367 (28%), Positives = 189/367 (51%), Gaps = 21/367 (5%) Query: 12 AGNWKSPEISEIADDVVMAINKSIQS----DSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 AG+W+ ++ A + + AI +Q+ ++ DLS IT +D IGA+L+ G Sbjct: 22 AGSWQVRALA--APETMAAITAVLQTAGKAETVHWDLSQITALDYIGAQLLW----NAWG 75 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN--SFKNLHYHIGKKIVKFINDS 125 K + ++ + + ++ +KP + ++Y+ S L ++I ++ FI+ Sbjct: 76 KKRPAQLTLAPQHADFFLRLEQTGPLEWKKPPQKYWYSLTSLLQLKHNILDHLLGFIS-- 133 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 ++G + + G F + G + +++ G + + L+ F+ G V++ Sbjct: 134 -----LIGQLTMDIGRFAREPQR--GPWKEISANIFHAGYQALGITALVGFLIGVVLSYL 186 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A QL QFG ++F ++++ + +RE+G LL A+++AGRSGS+I A++G M++ EE+DA+ Sbjct: 187 SAQQLHQFGGDVFLVNILGMSVIRELGPLLAAILVAGRSGSSITAQLGVMRVTEELDAML 246 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MGL L+ P++ AL I++PLL + + A+IG + + F Sbjct: 247 VMGLPHGYRLVMPKVIALAIAMPLLVVWTDAMALIGGMAAANLELGLSYKYFIRELPDAV 306 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 LAN + GL K I +VA G + ++ SLG T VV +I+IVI+ D+LFA Sbjct: 307 PLANYWIGLGKGVVFGALIALVACHFGLRIKPNTESLGAGTTISVVSAITIVILADALFA 366 Query: 366 IFYFAIG 372 I + +G Sbjct: 367 IIFSKVG 373 >gi|237751540|ref|ZP_04582020.1| ABC transport system permease [Helicobacter bilis ATCC 43879] gi|229372906|gb|EEO23297.1| ABC transport system permease [Helicobacter bilis ATCC 43879] Length = 387 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 92/273 (33%), Positives = 148/273 (54%), Gaps = 6/273 (2%) Query: 98 PQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVIS--NTGEFCASSYKFKGFLLS 155 P R N F + IG+ V F + S + +G+ + G S+++FK S Sbjct: 114 PYRPKRLNIFSSFFSFIGQWCVSFYQTALSFFNFMGMFLHFFMLGCLKPSNFRFK----S 169 Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI +Y G +PV ++ S + G I QGA+QL+ G I S+D + L LRE+G + Sbjct: 170 LIYHIYEQGFKALPVGLMTSLIIGYAITLQGAYQLNSMGVPIMSVDTTAKLALREMGPFI 229 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++IAGRS S+ A++GSM++ EE+ A++ M L+ LI PRI ALII +PL+ A+ Sbjct: 230 LALVIAGRSASSFTAQLGSMRLTEELSAMKAMNLNIFYFLIIPRILALIIVMPLMVFAAD 289 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 A+ G + I +I F + RF+ T ++ + + G++KAP IGIV G Sbjct: 290 AIALFGGMVAIKTSINIGFETYLERFYETVSITHFWIGVVKAPVFGAIIGIVGCFRGLEC 349 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + S+GK T VV +I +I+ +++F+ + Sbjct: 350 RGDTQSIGKMTTMSVVNAIFWIIMANAIFSFIF 382 >gi|208779915|ref|ZP_03247259.1| conserved hypothetical protein [Francisella novicida FTG] gi|254374661|ref|ZP_04990142.1| hypothetical protein FTDG_00836 [Francisella novicida GA99-3548] gi|151572380|gb|EDN38034.1| hypothetical protein FTDG_00836 [Francisella novicida GA99-3548] gi|208744370|gb|EDZ90670.1| conserved hypothetical protein [Francisella novicida FTG] Length = 366 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 113/335 (33%), Positives = 177/335 (52%), Gaps = 24/335 (7%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKK-----IKNQ 96 +D++ I +DT GA YF+ K ++L T + +F H+ K + N Sbjct: 40 IDITKIQALDTAGA----YFILKVLKDLEL----TKEDLVFD----NHKDKNLIELVANN 87 Query: 97 KPQRSFFYNSFK-NLH----YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKG 151 P R NS K N+ Y +GK + + + LG ++ G ++ Sbjct: 88 FPTRVDKENSHKSNIVFTSIYTLGKNTNNLLQEVKASIGFLGAIL--LGYLTLIRKPYRS 145 Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211 F ++ Y + + +V+L+S + G V+ + Q+G +IF +D++ I RE Sbjct: 146 FFSIVLNIAYDSTIKALSIVMLLSLIIGLVLTYLPLNLMMQYGTQIFVVDMLGISSFREF 205 Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271 L TA++IAGRSGSA +EIG MK+NEEIDA++T+G D ++ L+ PRI ALIISLP+LT Sbjct: 206 APLFTAIIIAGRSGSAFTSEIGIMKVNEEIDALQTIGEDPIQRLVLPRITALIISLPVLT 265 Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 ++A + IIG I+ I F R S + + + GL+K PF A I + + Sbjct: 266 VIAMIANIIGGIIIADVIAGITPLQFIERLFSNVNVNHFYIGLLKTPFFALVIAGIGCHQ 325 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 G AV S S+GK TT VV SI ++I++D++FA+ Sbjct: 326 GLAVRRDSQSVGKATTTSVVYSIFLIIVVDAIFAV 360 >gi|332184385|gb|AEE26639.1| ABC-type transport system permease protein [Francisella cf. novicida 3523] Length = 366 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 109/327 (33%), Positives = 173/327 (52%), Gaps = 8/327 (2%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYH-GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100 +D++ I +DT GA I+ ++ K L S + L L++ KI + + Sbjct: 40 IDITKIQSLDTAGAYFILRVLKDLGLTKKDLILNSDKDKNLIELVANNFPTKIDKEYSHK 99 Query: 101 S-FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 S + S Y +GK + + + LG ++ G +K F ++ Sbjct: 100 SNIVFTSI----YTLGKNTNNLLQEIKASIGFLGAIL--LGYLTLIRKPYKSFFSIVLNI 153 Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219 Y + + +V+L+S + G V+ + Q+G +IF +D++ I RE L TA++ Sbjct: 154 AYDSTIKALSIVMLLSLIIGLVLTYLPLNLMMQYGTQIFVVDMLGISSFREFAPLFTAII 213 Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279 IAGRSGSA +EIG MK+NEEIDA++T+G D ++ L+ PRI ALIISLP+LT++A + I Sbjct: 214 IAGRSGSAFTSEIGIMKVNEEIDALQTIGEDPIQRLVLPRITALIISLPVLTVIAMIANI 273 Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339 IG I+ I F R S + + + GL+K PF A I + +G AV S Sbjct: 274 IGGIIIADIIAGITPLQFIERLFSNVNVNHFYIGLLKTPFFALVIAGIGCHQGLAVRRDS 333 Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAI 366 S+GK TT VV SI ++I++D++FA+ Sbjct: 334 QSVGKATTTSVVYSIFLIIVVDAIFAV 360 >gi|118497851|ref|YP_898901.1| ABC transporter membrane protein [Francisella tularensis subsp. novicida U112] gi|194323824|ref|ZP_03057600.1| conserved hypothetical protein [Francisella tularensis subsp. novicida FTE] gi|254373206|ref|ZP_04988695.1| ABC superfamily ATP binding cassette transporter [Francisella tularensis subsp. novicida GA99-3549] gi|118423757|gb|ABK90147.1| ABC-type transport system permease protein [Francisella novicida U112] gi|151570933|gb|EDN36587.1| ABC superfamily ATP binding cassette transporter [Francisella novicida GA99-3549] gi|194322188|gb|EDX19670.1| conserved hypothetical protein [Francisella tularensis subsp. novicida FTE] Length = 366 Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 105/327 (32%), Positives = 173/327 (52%), Gaps = 8/327 (2%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQ-LFSLISFTHRKKIKNQKPQR 100 +D++ I +DT GA I+ ++ + H ++ L L++ K+ + + Sbjct: 40 IDITKIQALDTAGAYFILKVLKDLELTKEDLVFDNHKDKNLIELVANNFPTKVDKENSHK 99 Query: 101 S-FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 S + S Y +GK + + + LG ++ G ++ F ++ Sbjct: 100 SNIVFTSI----YTLGKNTNNLLQEVKASIGFLGAIL--LGYLTLIRKPYRSFFSIVLNI 153 Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219 Y + + +V+L+S + G V+ + Q+G +IF +D++ I RE L TA++ Sbjct: 154 AYDSTIKALSIVMLLSLIIGLVLTYLPLNLMMQYGTQIFVVDMLGISSFREFAPLFTAII 213 Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279 IAGRSGSA +EIG MK+NEEIDA++T+G D ++ L+ PRI ALIISLP+LT++A + I Sbjct: 214 IAGRSGSAFTSEIGIMKVNEEIDALQTIGEDPIQRLVLPRITALIISLPVLTVIAMIANI 273 Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339 IG I+ I F R S + + + GL+K PF A I + +G AV S Sbjct: 274 IGGIIIADVIAGITPLQFIERLFSNVNVNHFYIGLLKTPFFALVIAGIGCHQGLAVRRDS 333 Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAI 366 S+GK TT VV SI ++I++D++FA+ Sbjct: 334 QSVGKATTTSVVYSIFLIIVVDAIFAV 360 >gi|241668212|ref|ZP_04755790.1| ABC-type transport system permease protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876747|ref|ZP_05249457.1| ABC transporter, permease protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842768|gb|EET21182.1| ABC transporter, permease protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 365 Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 108/333 (32%), Positives = 175/333 (52%), Gaps = 8/333 (2%) Query: 36 QSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKL--QGVSTHIEQLFSLISFTHRKKI 93 + D +DL+ +T +DT GA Y + K ++L + + E+ +L+ + Sbjct: 34 KDDIKQIDLTKVTLLDTAGA----YIIIKTAKNLRLSKENIIFANEKDKNLVDIVFKNFP 89 Query: 94 KNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFL 153 + + S N N Y +GK +++ + LG + G +K F Sbjct: 90 STAEEELSNKSNVVFNSIYTLGKNTNNLLSEVKTSISFLGAIF--LGYITLIRRPYKAFF 147 Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 ++ Y + + +VIL+S + G V+ L Q+G +IF +D++ I RE Sbjct: 148 SIVLNICYDSTIRALSIVILLSLIIGLVLTYLPLNLLMQYGTQIFVVDMLGISSFREFAP 207 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 L TA++IAGRSGSA +EIG MK+NEEIDA++T+G D ++ L+ PRI AL+ISLP+LT++ Sbjct: 208 LFTAIIIAGRSGSAFTSEIGIMKVNEEIDALQTIGEDPMQRLVLPRITALVISLPVLTVI 267 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 A + I G I+ I F R S + + + GL+K PF A I + +G Sbjct: 268 AMIANIAGGIIIADLIAGITPLQFIERLFSNVNVNHFYIGLLKTPFFALVIAGIGCHQGL 327 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 +V S S+GK TT VV SI ++I++D++FA+ Sbjct: 328 SVKRDSQSVGKATTTSVVYSIFLIILVDAIFAV 360 >gi|56479165|ref|YP_160754.1| ABC transporter permease [Aromatoleum aromaticum EbN1] gi|56315208|emb|CAI09853.1| Possible ABC transport permease [Aromatoleum aromaticum EbN1] Length = 374 Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 101/370 (27%), Positives = 188/370 (50%), Gaps = 24/370 (6%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-FMEKYHGK 68 R G+W ++ AD+ + ++ +A L +T +D+ GA L+ + + E++ Sbjct: 21 RLEGDWTLRALAPRADEFRRLLARA--GPAASWKLDGVTRLDSFGATLLWHAWREQWP-- 76 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 Q +S ++L ++I + R+F + + +G ++ F N Sbjct: 77 ---QDLSAD-DELRAVIGRIEATAAEPLPEARAF---TLTDAIVVLGAGLLGFANH---- 125 Query: 129 AHILGLVISNTGEFCAS-SYKFKGFLLSLIRQ----MYYVGVSGVPVVILISFVTGAVIA 183 L + G+ C +Y + +R+ +Y VG PV L+ F+ G V++ Sbjct: 126 ---LAAFVQLAGQLCLDIAYLLRHPRDWPLREISANLYKVGARATPVAALVGFLIGVVLS 182 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 A QL FGA+I+ ++++ + +RE+G +L +V++AGRSGSA+ A++G M++ +E+DA Sbjct: 183 YLSALQLQAFGADIYIVNILGLGIVRELGPVLVSVLVAGRSGSAMTAQLGVMRVTDELDA 242 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG+ L+ P++ AL +++PLL + + A+ G + W D+ F F Sbjct: 243 LSAMGISRTVRLVLPKVVALTVAMPLLVLWTSAVALFGGMVSAWVQLDLGFGFFLDTLPR 302 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +AN++ GL K +I +VA G V ++ SL T VV +I++VI+ID++ Sbjct: 303 VVPVANLYIGLAKGAVFGLSIALVACHFGLRVRPNTESLSANTTASVVSAITVVILIDAV 362 Query: 364 FAIFYFAIGI 373 FAI +IG+ Sbjct: 363 FAIATRSIGV 372 >gi|270159818|ref|ZP_06188474.1| putative ABC transporter permease [Legionella longbeachae D-4968] gi|289165424|ref|YP_003455562.1| ABC transporter permease protein [Legionella longbeachae NSW150] gi|269988157|gb|EEZ94412.1| putative ABC transporter permease [Legionella longbeachae D-4968] gi|288858597|emb|CBJ12478.1| putative ABC transporter permease protein [Legionella longbeachae NSW150] Length = 375 Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 167/311 (53%), Gaps = 15/311 (4%) Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF--KNLHYHIGKKIV 119 +E+ +++L + +QL LI K++K + S +NL Y +GK+ Sbjct: 71 LEQRENQVELTDFTETQQQLLELI--------KSKKDILDYHIPSAPKENLFYQLGKESE 122 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 ++G + + E + +F+ L S+I +Y GV+ +P++ L+SF+ G Sbjct: 123 NKFRQVDGLLVLVGDLTTKIIEAFGNWRRFQ--LPSIISNIYTTGVTALPILALLSFLIG 180 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A Q QL +GA F L + RE L+TA+++AGR+ SA A+IGSMK+NE Sbjct: 181 VVLAYQMGLQLQTYGANSFIAYLSGMAIFREFAPLITAIIVAGRTSSAFTAQIGSMKLNE 240 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DA+ TMGL +L+ P++ L+I+ PLL ++ +I+G+ I+ I F F Sbjct: 241 EVDALLTMGLSPTELLVLPKVIGLLIAFPLLIFWSDLFSILGSMIMSNNMLGINFTDFLQ 300 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV--GVHSNSLGKKVTTCVVQSISIV 357 R T L+ + GL KAP A I +V +GF V G N +G + T VVQ++ ++ Sbjct: 301 RLRDTVGLSQLNLGLYKAPAFALLIALVGCFQGFKVEAGTEKN-IGSQTTKSVVQALFLI 359 Query: 358 IIIDSLFAIFY 368 II D+++++ Y Sbjct: 360 IIADAIYSVIY 370 >gi|260219765|emb|CBA26623.1| hypothetical protein Csp_H39530 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 387 Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 98/367 (26%), Positives = 185/367 (50%), Gaps = 19/367 (5%) Query: 13 GNWKSPEISEIADDVVMAINKSIQ------SDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 G W + +S A V + K++Q + + DL ID GA+ +++ Sbjct: 34 GRWTADALS--AKHVWQPLEKALQGVPGNGAPAVAWDLREAQRIDHTGAQ-VLWNAWGRQ 90 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 KLQ L + FT P + L +G+K+ + + Sbjct: 91 WPAKLQAEPLQKALLDRVAKFT--------VPTPPVERLDWHALLVSLGRKLARVESHLG 142 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 ++G ++ + + + +G + +Y +G + +P+ L+ F+ G V+A Sbjct: 143 GMVRLIGQLMLDVLQLL--RHPLQGPWRDVSGHLYRIGATALPITALVGFLIGVVLAYLM 200 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 + QL Q+GA+ F ++++ + +RE+G +L A+++AGRSGSAI A+IG M++ EE+DA+R Sbjct: 201 SKQLRQYGADSFIVNILGMSLIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELDAMRV 260 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG+ L+ PR A+ I++PL+ + +A++G + + A FF+ T Sbjct: 261 MGIPKGFRLVMPRTLAMAIAMPLVAVWTTMAALLGGMLASDLSMGLTPAYFFTALPKTVE 320 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 ++N++ L+K+ I ++A G V + SLG+ T VV SI++VI++D+LFA+ Sbjct: 321 ISNLWLSLVKSCVFGVLISLLACHHGLRVKPDTQSLGEGTTASVVSSITMVILVDALFAV 380 Query: 367 FYFAIGI 373 + ++G+ Sbjct: 381 IFKSVGL 387 >gi|254284160|ref|ZP_04959128.1| ABC transporter permease protein [gamma proteobacterium NOR51-B] gi|219680363|gb|EED36712.1| ABC transporter permease protein [gamma proteobacterium NOR51-B] Length = 377 Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 108/375 (28%), Positives = 190/375 (50%), Gaps = 39/375 (10%) Query: 13 GNWKS----PEISEI--ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 G+W+S PE+ + DD V A+ VD + D+ ++ + K H Sbjct: 28 GSWESSAVLPELGALFQPDDTVTALR---------VDALEVARWDS----RLISLLLKLH 74 Query: 67 GKIKLQGVSTHIE------QLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHY--HIGKKI 118 + +G+S E QL +L + +++ Q + + +S L Y +G ++ Sbjct: 75 RYCESRGISITTELPEGASQLLAL-AVAVPPAVESPS-QSAGWLHSLNPLPYLERLGARV 132 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 F+N +G ++S+TG + + + L+ Y G + +P++ L S + Sbjct: 133 TDFLN-------FVGSLVSSTGRVVTGRGRVR--VSDLLAFAYQTGPNALPIIGLTSLLV 183 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G ++ GA QL QFGA IF DL++I LRE+G L+TA++IAGR+G+A A++G+M++N Sbjct: 184 GMILGYLGAVQLQQFGAGIFVADLVTIGVLREMGALMTAIIIAGRTGAAYAAQLGTMRVN 243 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE+DAI +G+ + L+ PR+ A+ + +PLL++ A I+G IV P ++ Sbjct: 244 EEVDAIEILGISLMDFLVLPRVLAVTLMVPLLSLYAAIMGIVGGGIVSISLGITPLQ-YW 302 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 ++ ++ L ++ GL KA IGI + G G S +GK TT VV ++ +I Sbjct: 303 TQAQTSLGLDHLLVGLSKALLFGALIGIAGCRAGMQSGRSSEGVGKATTTAVVVALVYLI 362 Query: 359 IIDSLFAIFYFAIGI 373 + D+ + +GI Sbjct: 363 LADAAVNLLCQLLGI 377 >gi|237752254|ref|ZP_04582734.1| toluene ABC transporter permease [Helicobacter winghamensis ATCC BAA-430] gi|229376496|gb|EEO26587.1| toluene ABC transporter permease [Helicobacter winghamensis ATCC BAA-430] Length = 373 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 82/218 (37%), Positives = 129/218 (59%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 +L Q+ + VP++ L F+ G VIA QG+ QL QFGA + +++ ++L LRE+ + Sbjct: 155 ALFFQIQEAVIKAVPIISLACFLIGIVIAYQGSLQLRQFGASVLIVEMSAMLTLREMAPI 214 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 + A+++AGRS SA AEIG M+ +EIDA+R MG + V LI PRI+AL+ +LPL+ +A Sbjct: 215 IVAIIVAGRSASAFSAEIGMMRATQEIDAMRVMGFNPVTFLIFPRIFALLFALPLVVFVA 274 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 + ++G ++ I F RF T + + + G++KAPF IG++ GFA Sbjct: 275 DMFGLLGGMLISQLQLGISSEHFIERFLQTVEMRHFWIGMLKAPFFGLIIGLIGCYHGFA 334 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 + S+G T VV+SI VI D+L ++ + IG Sbjct: 335 TQKDTRSIGVHTTKSVVESIFCVIAFDALCSVLFTQIG 372 >gi|239813318|ref|YP_002942228.1| hypothetical protein Vapar_0299 [Variovorax paradoxus S110] gi|239799895|gb|ACS16962.1| protein of unknown function DUF140 [Variovorax paradoxus S110] Length = 388 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 108/385 (28%), Positives = 192/385 (49%), Gaps = 39/385 (10%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSI----QSDSAIVDLSAITEIDTIGAELI 58 ++G + +G W + +S + A++K + +D DL I ++D IGA+L+ Sbjct: 25 QDGRSWTVASGRWTTLAMS--SRSAWQALSKDLAGAPPADGRAWDLRPIEQLDHIGAQLL 82 Query: 59 M-YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ------RSFFYNSFKNLH 111 ++ ++ ++L H L + FT + P R F + + L Sbjct: 83 WDHWRHRWPATLELS--PQHKAVLDQVAQFT--VGTPEEPPPTLAERLRHFSHTGARGLE 138 Query: 112 YHIGKKIVKFIN----DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167 + + V I D+C+ L + G + F G L Y G + Sbjct: 139 --VARDFVGLIGQLALDACTL-----LRAPHRGPW----RDFSGHL-------YQFGATA 180 Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 + + L+ + G V+A + QL Q+GAE F ++++ + +RE+G +L AV+IAGRSGSA Sbjct: 181 LHITALVGLLIGVVLAYLISQQLRQYGAEAFVVNILGLSLIRELGPVLAAVLIAGRSGSA 240 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A+IG M++ EE+DA+R MG+ L+ PR+ AL I++PL+++ + +A++G + Sbjct: 241 ITAQIGVMRVTEELDAMRVMGIPHGFRLVMPRVMALAIAMPLISLWTSMAALLGGMLAAD 300 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 DI A F S ++N++ L K+ I ++ G V ++ SLG+ T Sbjct: 301 AALDISPAYFLSALPRAVPISNLWLALAKSAVFGILIALIGCYFGMKVKPNTESLGRGTT 360 Query: 348 TCVVQSISIVIIIDSLFAIFYFAIG 372 + VV SI+ VI++D+LFA+ + +G Sbjct: 361 SSVVTSITAVILVDALFAVLFKGVG 385 >gi|264676422|ref|YP_003276328.1| inner membrane ABC-transporter component [Comamonas testosteroni CNB-2] gi|299533747|ref|ZP_07047119.1| putative ABC transporter, permease protein [Comamonas testosteroni S44] gi|262206934|gb|ACY31032.1| putative inner membrane ABC-transporter component [Comamonas testosteroni CNB-2] gi|298718296|gb|EFI59281.1| putative ABC transporter, permease protein [Comamonas testosteroni S44] Length = 375 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 104/364 (28%), Positives = 183/364 (50%), Gaps = 16/364 (4%) Query: 12 AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKL 71 AG W + E+ + +A A DL + D IGA+L+ E++ Sbjct: 24 AGRWSAAELGDRHIWRRLAPQIRAVPKGAAWDLQQMVWFDHIGAQLLW---EQWGKAWPA 80 Query: 72 QGVSTHIEQLFSLISFTHR-KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ-A 129 Q ++T ++ S++ R ++ KP+ S + L G+ ++ D+C + Sbjct: 81 QLLTTKTQR--SMLERVARFSEVPESKPEPSGWMCEVNRL----GQMVI----DACGHFS 130 Query: 130 HILGLVISNTGEFCASSY-KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +++ LV + +G + +Y G + +P+ L+ F+ G V+A A Sbjct: 131 NLIQLVGQLLLDCLRLLRNPLRGPWRDISGHLYATGATALPITALVGFLIGVVLAYLMAL 190 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 QL QFGAE F ++++ I +RE+G LL A+++AGRSGSAI A+IG M++ EE+DA++ MG Sbjct: 191 QLRQFGAESFIVNILGISLIRELGPLLAAILVAGRSGSAITAQIGVMRVTEELDAMQVMG 250 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + L+ PR AL +S+PL+ + +A+ G + DI + F + + Sbjct: 251 ISQGYRLVLPRALALAVSMPLVALWTILAALAGGMVAADLTMDITPSYFVQSLPAAVKVG 310 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 N+ + K+ I ++ G V ++ SLG+ T VV SI++VII+D++FAI + Sbjct: 311 NLVLAMGKSVVFGVLIALIGCHWGLKVEPNTQSLGRGTTAAVVSSITMVIIVDAIFAILF 370 Query: 369 FAIG 372 +G Sbjct: 371 RNVG 374 >gi|56708309|ref|YP_170205.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110670780|ref|YP_667337.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis FSC198] gi|134301737|ref|YP_001121705.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis WY96-3418] gi|187931809|ref|YP_001891794.1| ABC-type transport system permease protein [Francisella tularensis subsp. mediasiatica FSC147] gi|224457429|ref|ZP_03665902.1| ABC-type transport system permease protein [Francisella tularensis subsp. tularensis MA00-2987] gi|254370792|ref|ZP_04986797.1| ABC superfamily ATP binding cassette transporter [Francisella tularensis subsp. tularensis FSC033] gi|254875129|ref|ZP_05247839.1| ABC transporter [Francisella tularensis subsp. tularensis MA00-2987] gi|56604801|emb|CAG45880.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110321113|emb|CAL09263.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis FSC198] gi|134049514|gb|ABO46585.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis WY96-3418] gi|151569035|gb|EDN34689.1| ABC superfamily ATP binding cassette transporter [Francisella tularensis subsp. tularensis FSC033] gi|187712718|gb|ACD31015.1| ABC-type transport system permease protein [Francisella tularensis subsp. mediasiatica FSC147] gi|254841128|gb|EET19564.1| ABC transporter [Francisella tularensis subsp. tularensis MA00-2987] gi|282159540|gb|ADA78931.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis NE061598] Length = 366 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 24/335 (7%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKK-----IKNQ 96 +D++ I +DT GA YF+ K ++L T + +F H+ K + N Sbjct: 40 IDITKIQALDTAGA----YFILKVLKDLEL----TKEDLVFD----NHKDKNLIELVANN 87 Query: 97 KPQRSFFYNSFK-NLH----YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKG 151 P R NS K N+ Y +GK + + + LG ++ G ++ Sbjct: 88 FPTRVDKENSHKSNIVFTSIYTLGKNTNNLLQEIKASIGFLGAIL--LGYLTLIRKPYRS 145 Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211 F ++ Y + + +V+L+S + G V+ + Q+G +IF +D++ I RE Sbjct: 146 FFSIVLNIAYDSTIKALSIVMLLSLIIGLVLTYLPLNLMMQYGTQIFVVDMLGISSFREF 205 Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271 L TA++IAGRS SA +EIG MK+NEEIDA++T+G D ++ L+ PRI ALIISLP+LT Sbjct: 206 APLFTAIIIAGRSSSAFTSEIGIMKVNEEIDALQTIGEDPIQRLVLPRITALIISLPVLT 265 Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 ++A + II I+ I F R S + + + GL+K PF A I + + Sbjct: 266 VIAMIANIISGIIIADVIAGITPLQFIERLFSNVNVNHFYIGLLKTPFFALVIAGIGCHQ 325 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 G AV S S+GK TT VV SI ++I++D++FA+ Sbjct: 326 GLAVRRDSQSVGKATTTSVVYSIFLIIVVDAIFAV 360 >gi|78067712|ref|YP_370481.1| ABC transporter, inner membrane subunit [Burkholderia sp. 383] gi|77968457|gb|ABB09837.1| ABC transporter, inner membrane subunit [Burkholderia sp. 383] Length = 374 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 106/376 (28%), Positives = 182/376 (48%), Gaps = 35/376 (9%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 R G W + ++ V + + DLS I +D +G + + + G+ Sbjct: 21 RLYGQWTALALARNRGAVARRVASIASGRVSEWDLSGIERLDHVGGQALW----RVWGRK 76 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 GV+ + Q ++ R + + P+R ++ L G+ I F Sbjct: 77 LPPGVALSVTQ-RTIFERIERLDSEREAPERVVRFDPVTRL----GQAIFGFGEHLQGGI 131 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQ------------MYYVGVSGVPVVILISFV 177 + GLVI + LS++R+ +Y G +P+ L++F+ Sbjct: 132 AMFGLVILDA--------------LSVLRRPKTMPWKETSANIYSAGAQALPITALVAFL 177 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V++ A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ Sbjct: 178 IGIVLSYLSAQQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRV 237 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EE+DA+R MG+ LI PR+ AL I++PLL + N A+ G ++ I F Sbjct: 238 TEELDAMRVMGIPHGLRLILPRVLALGIAMPLLVMWTNIVALTGGALAAKLVLGIDVNYF 297 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 +AN++ G+ K I +VA GF + +S SLG+ TT VV SI++V Sbjct: 298 VRSLPGVVPIANLYIGVGKGIVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVV 357 Query: 358 IIIDSLFAIFYFAIGI 373 I+ D++FAI + +G+ Sbjct: 358 ILADAVFAILFQNVGL 373 >gi|242278699|ref|YP_002990828.1| hypothetical protein Desal_1226 [Desulfovibrio salexigens DSM 2638] gi|242121593|gb|ACS79289.1| protein of unknown function DUF140 [Desulfovibrio salexigens DSM 2638] Length = 371 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 96/358 (26%), Positives = 175/358 (48%), Gaps = 14/358 (3%) Query: 21 SEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK---IKLQGVSTH 77 +E A +V ++ + +V+ S I +D GA L M + + + G+ Sbjct: 23 AEGAGEVWDKARAAVAAGCLVVECSGIEYLDGGGASLFMMMKAGCRDRGSSLVINGLRPE 82 Query: 78 IEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILG--LV 135 L Q ++ + +G+ D Q G ++ Sbjct: 83 FASFLELFDLDKAAPPSGQVKRK----GGIRGWITSVGQSGQAVAADMREQIEFTGNCVL 138 Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 S + + ++ F L+ + VG G+P+++LI F+ G +++ Q A L +FGA Sbjct: 139 ASLSTATLKNKLRWPDFWLTCEK----VGADGLPIILLIGFLMGLIMSFQSAVSLMRFGA 194 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 EIF +++ ++ RE+G ++TA+++AGR+GSA AEIG+MK+NEE+DA+ TMGL+ V L Sbjct: 195 EIFVPNMLGLVMFRELGPMVTAILLAGRTGSAFAAEIGTMKVNEELDALNTMGLNPVSFL 254 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PR+ A + PLLT+ NF +++G ++V+ P A + R + G+I Sbjct: 255 VLPRVLATVCMTPLLTLFFNFMSLVGGALVMLS-MGYPLATYCGRVFENVQWMDFSGGMI 313 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 KA + + + + G ++++G T+ VV I ++ + D +FA+ +F GI Sbjct: 314 KAVVFSFLVAGIGCQRGLVTKSGASAVGDSTTSAVVSGIILIAVFDGIFAVIFFLTGI 371 >gi|167627644|ref|YP_001678144.1| ABC-type transport system permease [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597645|gb|ABZ87643.1| ABC-type transport system permease protein [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 365 Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 105/324 (32%), Positives = 171/324 (52%), Gaps = 4/324 (1%) Query: 43 DLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF 102 DL+ +T +DT GA +I+ + + + + E+ +L+ + + + S Sbjct: 41 DLTKVTLLDTAGAYIIIKTAKNLS--LSKENIIFANEKDKNLVDIVFKNFPSTAEEELSS 98 Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162 N N Y +GK +++ + LG + G +K F ++ Y Sbjct: 99 KSNVVFNSIYTLGKNTNNLLSEIKTSISFLGAIF--LGYITLIRRPYKAFFSIVLNICYD 156 Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 + + +VIL+S + G V+ L Q+G +IF +D++ I RE L TA++IAG Sbjct: 157 STIRALSIVILLSLIIGLVLTYLPLNLLMQYGTQIFVVDMLGISSFREFAPLFTAIIIAG 216 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 RSGSA +EIG MK+NEEIDA++T+G D ++ L+ PRI AL+ISLP+LT++A + I G Sbjct: 217 RSGSAFTSEIGIMKVNEEIDALQTIGEDPMQRLVLPRITALVISLPVLTVIAMIANIAGG 276 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 I+ I F R S + + + GL+K PF A I + +G +V S S+ Sbjct: 277 IIIADLIAGITPLQFIERLFSNVNVNHFYIGLLKTPFFALVIAGIGCHQGLSVKRDSQSV 336 Query: 343 GKKVTTCVVQSISIVIIIDSLFAI 366 GK TT VV SI ++I++D++FA+ Sbjct: 337 GKATTTSVVYSIFLIILVDAIFAV 360 >gi|300114239|ref|YP_003760814.1| hypothetical protein Nwat_1606 [Nitrosococcus watsonii C-113] gi|299540176|gb|ADJ28493.1| protein of unknown function DUF140 [Nitrosococcus watsonii C-113] Length = 376 Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 127/375 (33%), Positives = 204/375 (54%), Gaps = 17/375 (4%) Query: 4 NGITVFRFAGNWKSPEISEIAD--DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 NG+ V G+W +E+ DV A + + +A V+LS + +DT GA L++ Sbjct: 12 NGLHVI---GDWTLEYYAELQSRIDVFKAQAEKNNTLNATVELSGLNRLDTAGAVLLVEL 68 Query: 62 M--EKYHGKIKL-QGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + E+ +K G++ L + T + Q+ RS L G++I Sbjct: 69 LGAERLAAFVKEGSGLTPARRALLDAVVRTMSMPLAPQRQARS----PLVALLAGTGERI 124 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGF-LLSLIRQMYYVGVSGVPVVILISFV 177 F Q +LG + G A+ ++ + L +L+ Q+ G++ + +V L++F+ Sbjct: 125 ELFWRQ---QLLLLGFIGLILGSLTATFWRPNRWRLTALVAQIQQTGLNAIGIVALLTFL 181 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 GAV+A GA L FGA I+++DL++ LRE GVLL A+++AGR+ SA A+IGSMK Sbjct: 182 VGAVVAFLGATVLQNFGATIYTVDLIAFSFLREFGVLLAAILLAGRTASAFTAQIGSMKA 241 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 NEEIDA+RT+GL +L+ PR+ AL++SLP+LT + S ++G +V DI A+ Sbjct: 242 NEEIDALRTLGLSTAELLVLPRVLALLLSLPILTFIGMLSGMLGGGLVCLVVLDIS-ALQ 300 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 F +L + GL KAP A I + EGF V + S+G+ T+ VVQSI +V Sbjct: 301 FVTILQGISLKHFLVGLSKAPIFAFFIAAIGCLEGFKVSGSAQSVGEHTTSSVVQSIFMV 360 Query: 358 IIIDSLFAIFYFAIG 372 I++D++ A+F+ +G Sbjct: 361 ILLDAIAALFFMEMG 375 >gi|319956950|ref|YP_004168213.1| hypothetical protein Nitsa_1211 [Nitratifractor salsuginis DSM 16511] gi|319419354|gb|ADV46464.1| protein of unknown function DUF140 [Nitratifractor salsuginis DSM 16511] Length = 371 Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 108/342 (31%), Positives = 170/342 (49%), Gaps = 18/342 (5%) Query: 36 QSDSAIVDLSAITEIDTIG---AELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKK 92 ++ +D + D+ G + M+K ++ G+ E++ LI R Sbjct: 42 ETPRCRIDFGKVQRFDSAGILLLLELRERMKKAGKACEITGLDEKKEKMLHLI---ERGY 98 Query: 93 IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILG-LVISNTGEFCASSYKFKG 151 + P+R + L + IGK V+ + H LG L +S F +K Sbjct: 99 GEEPLPKRR------EGLLWRIGKATVEELKVVRDFFHFLGELSVS----FLRLLFKPSN 148 Query: 152 FLL-SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210 F + + + + GV+ + ++ L SF+ G VIA + QL QFGA+I+ +D + I RE Sbjct: 149 FRMRETVYHIQHSGVNALFIIGLTSFLVGLVIAYESLVQLVQFGADIYVVDGIGIAITRE 208 Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 +G ++TA++IAGRS S+ AEIG+MKI EEI A++T+G D L+ PRI A++I+LPLL Sbjct: 209 LGPMITAIVIAGRSASSYAAEIGTMKITEEIAAMQTLGFDPFYFLVIPRIVAMMIALPLL 268 Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330 ++ I+G I D+ F F R + G++K PF A I Sbjct: 269 IFFSDVIGILGGMIATKVQVDLSFTFFIERLQEVLAAKHYILGIVKGPFFALIIAATGCF 328 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 GF V + S+G + T VV +I VI D+LFA+ Y +G Sbjct: 329 HGFRVTGDTESIGIETTASVVHAIFFVIACDALFAVIYTQLG 370 >gi|186474974|ref|YP_001856444.1| hypothetical protein Bphy_0205 [Burkholderia phymatum STM815] gi|184191433|gb|ACC69398.1| protein of unknown function DUF140 [Burkholderia phymatum STM815] Length = 379 Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 109/379 (28%), Positives = 186/379 (49%), Gaps = 32/379 (8%) Query: 8 VFRFAGNWKS-------------PEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG 54 + R +G W + P + E+ D ++ A DLS + +D +G Sbjct: 19 IVRLSGQWTALALARDRLHGQALPRLRELVDS---------RAHVAQWDLSNVERMDHVG 69 Query: 55 AELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI 114 + ++ + Y L ++ +F I+ + +N +P R F + F L Sbjct: 70 GQ-ALWRVWGYKLPRDLVALNDTQRDIFDRIALLDTVR-ENPEPVRRF--DPFTQL---- 121 Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 G I F+ + G VI + A + K + + +Y G +P+ L+ Sbjct: 122 GLGIFSFVEHVYGGVAMFGRVILDLLSI-ARNPKLAPWK-EISANVYSAGTQALPITALV 179 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 +F+ G V++ A QL FGA F ++++ + LRE+G +L+A+++AGRSGSAI A+IG Sbjct: 180 AFLIGIVLSYLSAQQLRLFGANQFIVNILGMSVLRELGPVLSAILVAGRSGSAITAQIGV 239 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 M++ EE+DA+R MG+ LI PR+ AL +++PLL + N +++G ++ I Sbjct: 240 MRVTEELDAMRVMGIPHGLRLILPRVIALSLAMPLLVMWTNIISLLGGALAAKLVLQIDV 299 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 + F +AN++ GL K I I GF + +S SLG+ TT VV SI Sbjct: 300 SYFVRALPGVVPVANLWIGLGKGMVFGMLIAIAGCHFGFRIKANSQSLGEGTTTSVVSSI 359 Query: 355 SIVIIIDSLFAIFYFAIGI 373 +IVI+ D++FAI + +G+ Sbjct: 360 TIVILADAVFAILFQNVGL 378 >gi|206559095|ref|YP_002229855.1| hypothetical protein BCAL0697 [Burkholderia cenocepacia J2315] gi|198035132|emb|CAR51006.1| putative membrane protein [Burkholderia cenocepacia J2315] Length = 374 Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 104/364 (28%), Positives = 175/364 (48%), Gaps = 11/364 (3%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 R G W + ++ V + + DLS I +D +G + + + G+ Sbjct: 21 RLTGQWTALALARNRGAVARRVASIATGRVSEWDLSGIERLDHVGGQALW----RVWGRK 76 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 GV+ Q ++ R + + P+R + L G+ I F Sbjct: 77 LPAGVALSATQ-RTIFERIERLDSEREAPERVVRVDPVTRL----GQAIFSFGEHLQGGI 131 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 + GLVI + S +Y G +P+ L++F+ G V++ A Q Sbjct: 132 AMFGLVILDALSVLRRPQTMPWRETSA--NIYSAGAQALPITALVAFLIGIVLSYLSAQQ 189 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R MG+ Sbjct: 190 LQTFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVMGI 249 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 L+ PR+ AL +++PLL + N A+ G +I I F +AN Sbjct: 250 PHGLRLVLPRVLALGVAMPLLVMWTNIIALTGGAIAAKFVLGIDVNYFVRSLPGVVPIAN 309 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 ++ GL K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI + Sbjct: 310 LYIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAILFQ 369 Query: 370 AIGI 373 +G+ Sbjct: 370 NVGL 373 >gi|15606674|ref|NP_214054.1| hypothetical protein aq_1530 [Aquifex aeolicus VF5] gi|2983906|gb|AAC07457.1| hypothetical protein aq_1530 [Aquifex aeolicus VF5] Length = 340 Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 109/346 (31%), Positives = 182/346 (52%), Gaps = 29/346 (8%) Query: 29 MAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI-KLQGVSTHIEQLFSLISF 87 + I K+I+ +DLS + ++DT GA + +++ + + +++G H+E L L+ Sbjct: 23 LKIPKNIEK----IDLSDLKKLDTFGATFLALLIKENNIPLERVEGGEKHVE-LIKLV-- 75 Query: 88 THRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSY 147 K+ + P++ + S KNL S LGL + ++ ++ + Sbjct: 76 LDNLKLPKEIPEKKVSF-SLKNLF---------------SFPEFLGLFLIHSFKYI-KQF 118 Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 +F F +++ G+ V +++ +SF+ G VIA Q A QL FGA IF +DL+ I Sbjct: 119 EFSAFF----KELQTSGLGSVLILVSLSFLIGVVIAYQSAVQLRAFGAGIFIVDLVGIST 174 Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267 RE+ LLT +++AGR S A +G KINEEIDA+R MGL V +L+ PR+ A +I Sbjct: 175 FRELAPLLTGIILAGRVSSGYTANVGLRKINEEIDALRVMGLSPVVLLVLPRVLASLIYT 234 Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327 PLLT L+ + ++G +I+ + I FF + ++F G +K PF AI + Sbjct: 235 PLLTSLSAVAMLLGGAIIAQVFLGIGVEEFFKKLPEAVAKEDLFAGYVKTPFFGVAIALN 294 Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + GF SLG V VV IS++I++D++F+I + +GI Sbjct: 295 GVYYGFLTDPKPESLGYSVMRSVVTGISVIILLDAVFSIIFLRLGI 340 >gi|294054794|ref|YP_003548452.1| protein of unknown function DUF140 [Coraliomargarita akajimensis DSM 45221] gi|293614127|gb|ADE54282.1| protein of unknown function DUF140 [Coraliomargarita akajimensis DSM 45221] Length = 366 Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 76/210 (36%), Positives = 130/210 (61%) Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 GV +P+V+L++ +TG +IA G QL +F A+IF DL+ + RE+G ++T V++AGR Sbjct: 157 GVQALPIVMLLNCLTGLIIAFIGVIQLQKFAADIFVADLVGLATARELGAVITGVIMAGR 216 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 +G+A A+IGSM++NEE+DA+ T G+ ++ L+ PR+ AL++ +PLL ++A+ I+G Sbjct: 217 TGAAFAAQIGSMQVNEEVDALTTFGISPMQFLVVPRVVALVLMMPLLGVVADIVGILGGL 276 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 I+ D+ +F++ H L + F G+ K IGI G G ++S+G Sbjct: 277 IIAVSISDVSVIQYFNQVHQAVGLNDFFIGIFKCAVFGLIIGIAGCYRGLNCGRDASSVG 336 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 T+ VV SI+ +++ D++FA+ +GI Sbjct: 337 LATTSAVVTSITWLVVADAIFAVLCHLLGI 366 >gi|307825468|ref|ZP_07655686.1| protein of unknown function DUF140 [Methylobacter tundripaludum SV96] gi|307733354|gb|EFO04213.1| protein of unknown function DUF140 [Methylobacter tundripaludum SV96] Length = 379 Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 79/214 (36%), Positives = 129/214 (60%) Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219 +Y GV + + L+ F+ G V++ A QL FGAEI+ ID++ + +RE+G LL A++ Sbjct: 165 IYESGVRALGITALVGFLIGIVLSYLSALQLKIFGAEIYIIDILGLSVIRELGPLLAAIL 224 Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279 +AGRSGSA+ A+IG M++ EE+DA+ MG+ L P++ AL I LPL+ + + A+ Sbjct: 225 VAGRSGSAMTAQIGIMRVTEELDALSAMGISHSLRLTLPKVMALTIVLPLIGVWTSALAL 284 Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339 IG + DI + FF + L N+F GL K+ I ++A GF + ++ Sbjct: 285 IGGMVSAQNTLDISYQQFFLKLPDVVPLTNVFIGLGKSAVFGLMIALIACHFGFRIKPNT 344 Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 SLG + T VV +I++VI++D++FAI + +G+ Sbjct: 345 ESLGNETTNSVVAAITVVIMVDAVFAILFMNVGM 378 >gi|326405508|ref|YP_004285590.1| putative ABC transporter permease [Acidiphilium multivorum AIU301] gi|325052370|dbj|BAJ82708.1| putative ABC transporter permease protein [Acidiphilium multivorum AIU301] Length = 362 Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 93/336 (27%), Positives = 170/336 (50%), Gaps = 27/336 (8%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 +DLS IDT GA L++ + G+ + QG++ E L + +++ P+ Sbjct: 48 LDLSRAARIDTSGAALLLALERGHDGETRWQGLTPAAEGLIA--------RLRAALPETG 99 Query: 102 FFYNSFKNLH-----YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156 + + +G +I F ++ +++ TG + G + Sbjct: 100 APPPPPRTVRGPGPLRTLGVRI-AFFGET---------ILATTGLPARRRFLRGG---NF 146 Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 R G +P+VI++ F+ G ++A Q A + QFGA+I+ L+S+ RE+G LL Sbjct: 147 FRIAERAGAQALPLVIMLGFLIGMILAFQSAIPMRQFGADIYVAALVSLSLFRELGPLLA 206 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV++AGR+GSA AE+G+M +NEE+ A+ TMG+D +L+ PR+ A ++ +P L + + Sbjct: 207 AVILAGRTGSAFAAELGTMMVNEEVAALTTMGIDPGTMLVIPRMAAAMLVMPALALGIDV 266 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 S ++G V+ P + ++ A+ ++ GL+K+ A+G++ + G G Sbjct: 267 SGVLGMGFVM-GILGFPPSAIVAQMQMAASPHDVLLGLMKSVVFGAAVGLIGCRAGLTAG 325 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 ++G+ T+ VV I I+ID LFA+ + +G Sbjct: 326 GGPRAVGEAATSAVVGGIVATILIDGLFAVVLYRLG 361 >gi|237747194|ref|ZP_04577674.1| ABC transport system permease [Oxalobacter formigenes HOxBLS] gi|229378545|gb|EEO28636.1| ABC transport system permease [Oxalobacter formigenes HOxBLS] Length = 374 Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 103/368 (27%), Positives = 188/368 (51%), Gaps = 25/368 (6%) Query: 13 GNWKSPEISEIADDVVMAINKSIQS----DSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 GNW+ ++ A V+ I +++S S DL+ I E+D IGA+L+ K + Sbjct: 23 GNWRVESLA--ASGVINRIRSTVRSFSKKGSVSWDLTQILELDYIGAQLLWDNWNKTRPR 80 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 L V++ +LFS + ++ +KP H+ + +I KF + Sbjct: 81 ELL--VTSEQNKLFSRLESAGNLQLPAEKPA-----------HWQLFGRIRKFPQAAAEH 127 Query: 129 -AHILGLV---ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + I+GLV + + F + ++ G + +Y+ G + + ++ F+ G V++ Sbjct: 128 FSGIVGLVGQLMIDLARFAKAPHR--GPWTEISANIYHAGAQALGITAIVGFLIGVVLSY 185 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 A QL FG ++F ++L+ + +RE+G LL A+++AGRSGS++ A++G M++ EE+ A+ Sbjct: 186 LSAQQLHMFGGDVFLVNLLGMSVIRELGPLLAAILVAGRSGSSMTAQLGVMRVTEELSAM 245 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 + MG+ LI P++ AL I +PLL I + A++G + + F S + Sbjct: 246 QVMGMSHGFRLIMPKVIALSIVMPLLIIWTDIVALLGGMLAASFEIGLSIPYFLSALPNA 305 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +AN + G+ K I ++A G + ++ SLG+ T VV SI+IVI+ D++F Sbjct: 306 VPMANFWIGIGKGIVFGILIALIACYYGMKIKPNTESLGQGTTNSVVTSITIVILADAIF 365 Query: 365 AIFYFAIG 372 A+ +G Sbjct: 366 AVVLQGVG 373 >gi|221069470|ref|ZP_03545575.1| protein of unknown function DUF140 [Comamonas testosteroni KF-1] gi|220714493|gb|EED69861.1| protein of unknown function DUF140 [Comamonas testosteroni KF-1] Length = 375 Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 99/332 (29%), Positives = 171/332 (51%), Gaps = 14/332 (4%) Query: 43 DLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF 102 DL + +D IGA+L+ E++ G+ + T Q L ++ KP+ S Sbjct: 55 DLQQMVWLDHIGAQLLW---EQW-GRTWPARLLTTKNQRSMLERVARFSEVPEAKPEPSG 110 Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQ-AHILGLVISNTGEFCASSY-KFKGFLLSLIRQM 160 + L G+ ++ D+C ++++ LV + F+G + + Sbjct: 111 WMCEVNRL----GQMVI----DACGHFSNLIQLVGQLLLDCLRLLRNPFRGPWRDISGHL 162 Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 Y G + +P+ L+ F+ G V+A A QL QFGAE F ++++ I +RE+G LL A+++ Sbjct: 163 YATGATALPITALVGFLIGVVLAYLMALQLRQFGAESFIVNILGISLIRELGPLLAAILV 222 Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280 AGRSGSAI A+IG M++ EE+DA++ MG+ L+ PR AL +S+PL+ + +A+ Sbjct: 223 AGRSGSAITAQIGVMRVTEELDAMQVMGISQGYRLVLPRALALAVSMPLVALWTILAALA 282 Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 G + DI + F + + N+ + K+ I ++ G V ++ Sbjct: 283 GGMVAADLTMDITPSYFIQSLPAAVKIGNLVLAMGKSVVFGVLIALIGCHWGLKVEPNTQ 342 Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 SLG+ T VV SI++VII+D++FAI + +G Sbjct: 343 SLGRGTTAAVVSSITMVIIVDAIFAILFRNVG 374 >gi|74316265|ref|YP_314005.1| ABC transporter permease [Thiobacillus denitrificans ATCC 25259] gi|74055760|gb|AAZ96200.1| ABC transport system permease protein [Thiobacillus denitrificans ATCC 25259] Length = 364 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 82/219 (37%), Positives = 134/219 (61%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 L Q+ V V +P+V + F+ G V A Q QFGA IF +D + + LREI + Sbjct: 146 ELAAQVRDVFVGAIPIVSGMMFLLGVVFAYLLGDQARQFGANIFVVDGLLLAVLREISPV 205 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 + AV++AGR+G+AI A++G+MK+ EEIDAI T+GL + +L+ PR+ ALI+++PLL + Sbjct: 206 IVAVLVAGRTGAAITAQLGTMKVAEEIDAIATLGLSPLAVLVIPRVLALIVAMPLLVFIG 265 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 + + ++G +V+ + I +F R + L + GL KAP A I +++ + G A Sbjct: 266 DIAGLVGGMLVVQQQLAISPPIFLDRLYDVILLKTLMVGLGKAPVFALFIALISCRMGLA 325 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 V + S+G T+ VVQS+ VII++++FA+ + +GI Sbjct: 326 VSRDARSVGVNTTSTVVQSLVAVIILNAVFAVAFVRLGI 364 >gi|302342029|ref|YP_003806558.1| hypothetical protein Deba_0592 [Desulfarculus baarsii DSM 2075] gi|301638642|gb|ADK83964.1| protein of unknown function DUF140 [Desulfarculus baarsii DSM 2075] Length = 380 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 97/342 (28%), Positives = 179/342 (52%), Gaps = 14/342 (4%) Query: 33 KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK--IKLQGVSTHIEQLFSLISFTH- 89 K + S ++DLS + +DT GA + + ++L+ + + +LI Sbjct: 47 KELAPRSVLLDLSRLDYLDTSGAMAVKIWAAAPPQDLAVRLEAGQSRFRDMLALIDVDQV 106 Query: 90 RKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKF 149 RK N + + +G++I + + + +V++ Sbjct: 107 RKPAINPDKRDAGMLEGMGQSARRMGEQIGQLLAFVGQATKSVLMVVARPATLR------ 160 Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209 G +L+ ++Q VGV G+P+V LI + G ++A + QL FGA+++ L+++ +R Sbjct: 161 MGDVLAYMQQ---VGVDGLPIVSLIGLLLGMIMAFMSSLQLKSFGADVYVATLVAVAMVR 217 Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 E+G ++TA+++AGRSGS+ AEIG+MK+NEE+DA+ MG D V L P++ A ++ +PL Sbjct: 218 ELGPIMTAILVAGRSGSSFAAEIGTMKVNEEVDALTVMGYDPVIFLALPKVIAAVLMVPL 277 Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329 LT+ + +AI+G IV D+ + + S+ ++ T + KA I ++ Sbjct: 278 LTLFSIAAAIMGGLIVGVAGLDLTPYTYLNESISSFDAGDLMTSMFKAAVFGLLIAVIGC 337 Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI--FYF 369 ++GF V + +GK T+ VV ++ ++I+ DS+FAI +YF Sbjct: 338 QKGFTVEGGAAGVGKATTSAVVAALFLIIVTDSVFAIIQYYF 379 >gi|160872209|ref|ZP_02062341.1| ABC transporter, permease [Rickettsiella grylli] gi|159121008|gb|EDP46346.1| ABC transporter, permease [Rickettsiella grylli] Length = 375 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 117/352 (33%), Positives = 194/352 (55%), Gaps = 14/352 (3%) Query: 25 DDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ--GVSTHIEQLF 82 D +N+ I+S I++ + IT++D+ GA + + ++ K K+ G+++ + LF Sbjct: 35 DQSFQKLNRHIES-PLILNAAFITQMDSSGAWQLYQWKKQLAKKRKVHLIGLNSKHQALF 93 Query: 83 SLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGL-VISNTGE 141 +I T ++IK +++F + L +GKK ++ N+ S +G IS Sbjct: 94 GMIE-TAAEQIKPLPREKTF-----RGLGL-LGKKSIEQWNELKSYLAFIGKNFISACHA 146 Query: 142 FCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSID 201 F +L +I G+ + ++ L+SF+ G V+ Q FQL FGA F ID Sbjct: 147 FLHPRQLRVRAILGIIEN---TGLDALGIIALLSFMIGIVLTYQMGFQLKNFGATRFIID 203 Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261 L+ + LRE LLTA+M+AGRSGSA A++G MKI EEIDA+ TMG+ ++LI PR+W Sbjct: 204 LLGLAILREFSPLLTAIMVAGRSGSAFTAQLGMMKIKEEIDALNTMGVLPRQLLILPRLW 263 Query: 262 ALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMA 321 L+++LPLLT+ A+ ++G + +I + F RF +L+++ G+ KAP A Sbjct: 264 GLLLALPLLTVWADIFGLLGGMAMTHNMMNISYLDFLHRFPKVVSLSSLIIGVGKAPVFA 323 Query: 322 CAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 I A +G V ++S+G++ T VVQ I +I+ D+LF+I + + I Sbjct: 324 LIIASTACFQGLRVSGSADSVGRQTTRSVVQGIFFIIVADALFSILFSTLNI 375 >gi|183220168|ref|YP_001838164.1| ABC transporter permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910288|ref|YP_001961843.1| ABC transporter membrane protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774964|gb|ABZ93265.1| Membrane protein of an ABC transporter complex [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778590|gb|ABZ96888.1| ABC-type transport system, permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 374 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 97/294 (32%), Positives = 161/294 (54%), Gaps = 16/294 (5%) Query: 87 FTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASS 146 F +R I N ++ YN + ++I K DS + L I+ TGE S Sbjct: 90 FQYRLNITNDDSKK---YNEQLAVSLRKSEQIGKLTIDSLLEFKYL---ITFTGELTVSF 143 Query: 147 YKFKGFL-------LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 ++ FL R +GV+ P++ +I F+ G +++ Q A + +FGAEIF Sbjct: 144 WR--SFLHPSKIRWKDSFRVAESMGVNAFPIIAMIGFLLGLIMSFQSAIPMRRFGAEIFV 201 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 +L+ + RE+G L+TA +++GRSGS+ AE+G+MK++EEIDA+ TMGL V+ LI PR Sbjct: 202 ANLVGLSLFRELGPLMTAFILSGRSGSSFAAELGTMKVSEEIDALTTMGLPPVQFLIIPR 261 Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319 + A +I PLLTI+ N +IG ++V+ + P F ++ + L++I GL+K+ F Sbjct: 262 LVASLIVTPLLTIVFNLFGLIGGAVVLVS-FGFPLITFVNQVNIAVGLSDILGGLLKSYF 320 Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 I + G + ++G+ T+ VV SI +V I+D +F++ +F + I Sbjct: 321 FGMIIASIGCYRGLKTASGAGAVGESTTSAVVGSIILVSILDGIFSVLFFYLRI 374 >gi|192359616|ref|YP_001982090.1| ABC-type transport system, permease [Cellvibrio japonicus Ueda107] gi|190685781|gb|ACE83459.1| ABC-type transport system, permease component [Cellvibrio japonicus Ueda107] Length = 375 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 75/210 (35%), Positives = 131/210 (62%), Gaps = 1/210 (0%) Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G + +V LI+ + G ++A G+ QL Q GA+++ DL+++ +RE+G L+TAV++AGR Sbjct: 167 GPRALAIVTLIALLVGMILAYLGSVQLRQLGAQVYVADLVALGMVREMGALMTAVIMAGR 226 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 +G+A A++G+M++NEEIDA++TMG+ + L+ PR+ AL++ +PLL I AN ++G + Sbjct: 227 TGAAYAAQLGTMQVNEEIDALKTMGISSIEFLVLPRLLALVLVMPLLCIYANVIGMVGGA 286 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 +V D+ F + + +I TGL+K+ F I I + G G +S+++G Sbjct: 287 LVA-TSMDVNFIQYILQTQGAVGWVDISTGLVKSVFFGVLIAIAGCQAGIHCGRNSDAVG 345 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 T VV++I +++ D+ F I Y +GI Sbjct: 346 MAATNAVVRAIVYLVVADAAFNILYDKLGI 375 >gi|116690919|ref|YP_836542.1| hypothetical protein Bcen2424_2901 [Burkholderia cenocepacia HI2424] gi|116649008|gb|ABK09649.1| protein of unknown function DUF140 [Burkholderia cenocepacia HI2424] Length = 447 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 109/380 (28%), Positives = 183/380 (48%), Gaps = 43/380 (11%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 R G W + ++ V I + DLS I +D +G + + + G+ Sbjct: 94 RLTGQWTALSLARNRGAVARRIASIAAGRVSEWDLSGIERLDHVGGQALW----RVWGRK 149 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 GV+ Q ++ R + + P+R IV+F D ++ Sbjct: 150 LPAGVALSATQ-RTIFERIERLDSEREAPER-----------------IVRF--DPVTR- 188 Query: 130 HILGLVISNTGEFCASSYKFKGFL----LSLIRQ------------MYYVGVSGVPVVIL 173 LGL I GE G + LS++R+ +Y G +P+ L Sbjct: 189 --LGLAIFAFGEHLQGGITMFGRVILDALSVLRRPKTMPWKETSANIYSAGAQALPITAL 246 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 ++F+ G V++ A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG Sbjct: 247 VAFLIGIVLSYLSAQQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIG 306 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 M++ EE+DA+R MG+ LI PR+ AL +++PLL + N A+ G ++ I Sbjct: 307 VMRVTEELDAMRVMGIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKLVLGID 366 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 F +AN++ G+ K I +VA GF + +S SLG+ TT VV S Sbjct: 367 INYFVRSLPGVVPIANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSS 426 Query: 354 ISIVIIIDSLFAIFYFAIGI 373 I++VI+ D++FAI + +G+ Sbjct: 427 ITVVILADAVFAILFQNVGL 446 >gi|254247077|ref|ZP_04940398.1| hypothetical protein BCPG_01856 [Burkholderia cenocepacia PC184] gi|124871853|gb|EAY63569.1| hypothetical protein BCPG_01856 [Burkholderia cenocepacia PC184] Length = 425 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 109/380 (28%), Positives = 183/380 (48%), Gaps = 43/380 (11%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 R G W + ++ V I + DLS I +D +G + + + G+ Sbjct: 72 RLTGQWTALSLARNRGAVARRIASIAAGRVSEWDLSGIERLDHVGGQALW----RVWGRK 127 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 GV+ Q ++ R + + P+R IV+F D ++ Sbjct: 128 LPAGVALSATQ-RTIFERIERLDSEREAPER-----------------IVRF--DPVTR- 166 Query: 130 HILGLVISNTGEFCASSYKFKGFL----LSLIRQ------------MYYVGVSGVPVVIL 173 LGL I GE G + LS++R+ +Y G +P+ L Sbjct: 167 --LGLAIFAFGEHLQGGIAMFGRVILDALSVLRRPKTMPWKEISANIYSAGAQALPITAL 224 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 ++F+ G V++ A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG Sbjct: 225 VAFLIGIVLSYLSAQQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIG 284 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 M++ EE+DA+R MG+ LI PR+ AL +++PLL + N A+ G ++ I Sbjct: 285 VMRVTEELDAMRVMGIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKLVLGID 344 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 F +AN++ G+ K I +VA GF + +S SLG+ TT VV S Sbjct: 345 INYFVRSLPGVVPIANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSS 404 Query: 354 ISIVIIIDSLFAIFYFAIGI 373 I++VI+ D++FAI + +G+ Sbjct: 405 ITVVILADAVFAILFQNVGL 424 >gi|170734244|ref|YP_001766191.1| hypothetical protein Bcenmc03_2910 [Burkholderia cenocepacia MC0-3] gi|169817486|gb|ACA92069.1| protein of unknown function DUF140 [Burkholderia cenocepacia MC0-3] Length = 374 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 109/380 (28%), Positives = 183/380 (48%), Gaps = 43/380 (11%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 R G W + ++ V I + DLS I +D +G + + + G+ Sbjct: 21 RLTGQWTALSLARNRGAVARRIASIAAGRVSEWDLSGIERLDHVGGQALW----RVWGRK 76 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 GV+ Q ++ R + + P+R IV+F D ++ Sbjct: 77 LPAGVALSATQ-RTIFERIERLDSEREAPER-----------------IVRF--DPVTR- 115 Query: 130 HILGLVISNTGEFCASSYKFKGFL----LSLIRQ------------MYYVGVSGVPVVIL 173 LGL I GE G + LS++R+ +Y G +P+ L Sbjct: 116 --LGLAIFAFGEHLQGGIAMFGRVILDALSVLRRPKTMPWKETSANIYSAGAQALPITAL 173 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 ++F+ G V++ A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG Sbjct: 174 VAFLIGIVLSYLSAQQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIG 233 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 M++ EE+DA+R MG+ LI PR+ AL +++PLL + N A+ G ++ I Sbjct: 234 VMRVTEELDAMRVMGIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKLVLGID 293 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 F +AN++ G+ K I +VA GF + +S SLG+ TT VV S Sbjct: 294 INYFVRSLPGVVPIANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSS 353 Query: 354 ISIVIIIDSLFAIFYFAIGI 373 I++VI+ D++FAI + +G+ Sbjct: 354 ITVVILADAVFAILFQNVGL 373 >gi|27363501|ref|NP_759029.1| putative ABC transport system permease [Vibrio vulnificus CMCP6] gi|27359617|gb|AAO08556.1| Putative ABC transport system permease protein [Vibrio vulnificus CMCP6] Length = 357 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 81/204 (39%), Positives = 125/204 (61%), Gaps = 1/204 (0%) Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G VP+++LI F+ G +IA + QFGA +F D + I LRE+G L+TA++ AGR Sbjct: 153 GADAVPIIMLIGFLMGVIIAFEIGLVAEQFGAVLFVADGIGISMLRELGPLMTAIVFAGR 212 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 +G+A AEIG+ K+NEEI+A+RT G+ V L+ PRI+A I+ LPLLT+ A+ + G + Sbjct: 213 TGAAFAAEIGTQKVNEEINALRTFGISPVEFLVIPRIYASILVLPLLTVFADIIGVFGGA 272 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 +V+ K +DI F ++ + S ++ + GLIKA I ++ + G A G S S+G Sbjct: 273 LVLLK-FDISFVQYYHQLLSALSIWDFGFGLIKATTFGFIIAVIGCERGLATGQGSTSVG 331 Query: 344 KKVTTCVVQSISIVIIIDSLFAIF 367 T+ VV SI +++ID F + Sbjct: 332 LAATSAVVSSIIWIVVIDGFFTVL 355 >gi|89256086|ref|YP_513448.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica LVS] gi|115314562|ref|YP_763285.1| ABC transporter ATP-binding protein [Francisella tularensis subsp. holarctica OSU18] gi|156502103|ref|YP_001428168.1| ABC transporter membrane protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010771|ref|ZP_02275702.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica FSC200] gi|254367414|ref|ZP_04983440.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica 257] gi|290954528|ref|ZP_06559149.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica URFT1] gi|295312044|ref|ZP_06802859.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica URFT1] gi|89143917|emb|CAJ79136.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica LVS] gi|115129461|gb|ABI82648.1| ABC superfamily ATP binding cassette transporter, ABC protein [Francisella tularensis subsp. holarctica OSU18] gi|134253230|gb|EBA52324.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica 257] gi|156252706|gb|ABU61212.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 366 Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 110/335 (32%), Positives = 173/335 (51%), Gaps = 24/335 (7%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKK-----IKNQ 96 +D++ I +DT GA YF+ K ++L T + +F H+ K + N Sbjct: 40 IDITKIQALDTAGA----YFILKVLKDLEL----TKEDLIFD----NHKDKNLIELVANN 87 Query: 97 KPQRSFFYNSFK-NLH----YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKG 151 P R NS K N+ Y +GK + + + LG ++ G ++ Sbjct: 88 FPTRVDKENSHKSNIVFTSIYTLGKNTNNLLQEIKASIGFLGAIL--LGYLTLIRKPYRS 145 Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211 F ++ Y + + +V+L+S + G V+ + Q+ +IF +D++ I RE Sbjct: 146 FFSIVLNIAYDSTIKALSIVMLLSLIIGLVLTYLPLNLMMQYSTQIFVVDMLGISSFREF 205 Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271 L TA++IAGRS SA +EIG MK+NEEIDA++T+G D ++ L+ PRI ALIISLP+LT Sbjct: 206 APLFTAIIIAGRSSSAFTSEIGIMKVNEEIDALQTIGEDPIQRLVLPRITALIISLPVLT 265 Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 ++A + II I+ I F R S + + + GL+K PF A I + + Sbjct: 266 VIAMIANIISGIIIADVIAGITPLQFIERLFSNVNVNHFYIGLLKTPFFALVIAGIGCHQ 325 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 G AV S S+GK T VV SI ++I+ID++FA+ Sbjct: 326 GLAVRRDSQSVGKATTNSVVYSIFLIIVIDAIFAV 360 >gi|94263506|ref|ZP_01287318.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|93456144|gb|EAT06287.1| conserved hypothetical protein [delta proteobacterium MLMS-1] Length = 379 Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 106/387 (27%), Positives = 198/387 (51%), Gaps = 41/387 (10%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S +GI G ++ I + ++ + K+ ++D+ + +D G L+++F Sbjct: 19 SADGILHAVVRGRMEAGSIGPLWQELASKLKKT--RAGLVLDVEKVDYLDMSGQALLLHF 76 Query: 62 ---MEKYHGKIKLQGVST---HIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIG 115 M+ + ++++G+ HI++ + F +R K ++ ++ + L G Sbjct: 77 SRLMQDSNRPVEVRGLRPDFRHIQE--QIDCFDYRPKPLQRR------LSAVEEL----G 124 Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCAS---------SYKFKGFLLSLIRQMYYVGVS 166 + V D +G S GEF +S + ++K ++ M VG Sbjct: 125 RAAVNLGRD-------IGQFFSFVGEFVSSLAYCLAHPGTVRWK----DVLSHMENVGGR 173 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 V ++ L+ F+ G +IA Q A L FGAE+F L+ + +RE+G L+TA+++AGRSGS Sbjct: 174 AVFIIALMGFLIGVIIAFQTAITLKTFGAEMFVAKLLGLSMVRELGPLVTAIILAGRSGS 233 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A AEIG+MK NEEI+A++TMGL+ VR L+ PR+ A ++ PLL + + IG ++V+ Sbjct: 234 AFAAEIGTMKTNEEINALQTMGLNPVRFLVVPRMLATMLVTPLLCVFFLLFSFIGGALVM 293 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 D + + ++ +A+ G++K + + V G G ++++G+ Sbjct: 294 LS-MDFTLNSYVHQLSTSVGMADFLGGMVKVLVFSILVAWVGCVRGLQTGSGASAVGRST 352 Query: 347 TTCVVQSISIVIIIDSLFAIFYFAIGI 373 T+ VV +I ++I+ D +FA+ Y+ +GI Sbjct: 353 TSAVVSAIILIILADGIFAVVYYMLGI 379 >gi|94263144|ref|ZP_01286962.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|93456515|gb|EAT06629.1| conserved hypothetical protein [delta proteobacterium MLMS-1] Length = 379 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 105/384 (27%), Positives = 193/384 (50%), Gaps = 35/384 (9%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S +GI G ++ I + ++ + K+ ++D+ + +D G L+++F Sbjct: 19 SADGILHAVVRGRMEAGSIGPLWQELASKLKKT--RAGLVLDVEKVDYLDMSGQALLLHF 76 Query: 62 ---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 M+ + ++++G+ + IS R ++ QR + +G+ Sbjct: 77 SRLMQDGNLPVEIRGLHPDFRHIQEQIS---RFDCHSKPAQRRL------SAVEELGRAA 127 Query: 119 VKFINDSCSQAHILGLVISNTGEFCAS---------SYKFKGFLLSLIRQMYYVGVSGVP 169 V D +G S GEF +S + ++K ++ M VG V Sbjct: 128 VNLGRD-------IGQFFSFVGEFVSSLAYCLAHPGTVRWK----DVLSHMENVGGRAVF 176 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ L+ F+ G +IA Q A L FGAE+F L+ + +RE+G L+TA+++AGRSGSA Sbjct: 177 IIALMGFLIGVIIAFQTAITLKTFGAEMFVAKLLGLSMVRELGPLVTAIILAGRSGSAFA 236 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG+MK NEEI+A++TMGL+ VR L+ PR+ A ++ PLL + + IG ++V+ Sbjct: 237 AEIGTMKTNEEINALQTMGLNPVRFLVVPRMLATMLVTPLLCVFFLLFSFIGGALVMLS- 295 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 D + + ++ +A+ G++K + + V G G ++++G+ T+ Sbjct: 296 MDFTLNSYVHQLSTSVGMADFLGGMVKVLVFSILVAWVGCVRGLQTGSGASAVGRSTTSA 355 Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373 VV +I ++I+ D +FA+ Y+ +GI Sbjct: 356 VVSAIILIILADGIFAVVYYMLGI 379 >gi|319791003|ref|YP_004152643.1| hypothetical protein Varpa_0310 [Variovorax paradoxus EPS] gi|315593466|gb|ADU34532.1| protein of unknown function DUF140 [Variovorax paradoxus EPS] Length = 388 Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 97/340 (28%), Positives = 177/340 (52%), Gaps = 31/340 (9%) Query: 43 DLSAITEIDTIGAELIM-YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ-- 99 DL I ++D IGA+L+ ++ ++ ++++ + H L + +T ++ K Sbjct: 67 DLRPIEQLDHIGAQLLWEHWRHEWPATLEME--AQHKAVLDQVAQYTVATPVEPPKTLAD 124 Query: 100 --RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYK-----FKGF 152 R+F +N G + + D ++G + + G + ++ F G Sbjct: 125 RIRTFSHN---------GPRAMVVARDFIG---LIGQLAIDVGTLIRAPHRAPWRDFSGH 172 Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 L Y G + + + L+ + G V+A + QL +GAE F ++++ + +RE+G Sbjct: 173 L-------YQFGATALHITALVGLLIGVVLAYLISQQLRNYGAEAFVVNILGLSLVRELG 225 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 +L AV+IAGRSGSAI A+IG M++ EE+DA+R MG+ L+ PR+ AL I++PL+++ Sbjct: 226 PVLAAVLIAGRSGSAITAQIGVMRVTEELDAMRVMGIPHGFRLVMPRVLALAIAMPLISL 285 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 + +A++G + DI A F S +AN++ + K+ I ++ G Sbjct: 286 WTSMAALLGGMLAADAALDISPAYFLSALPRAVPIANLWLAMAKSAVFGILIALIGCYFG 345 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 V ++ SLG+ T+ VV SI+ VI++D+LFA+ + IG Sbjct: 346 MKVKPNTESLGRGTTSSVVTSITAVILVDALFAVLFKGIG 385 >gi|88810292|ref|ZP_01125549.1| hypothetical protein NB231_14468 [Nitrococcus mobilis Nb-231] gi|88791922|gb|EAR23032.1| hypothetical protein NB231_14468 [Nitrococcus mobilis Nb-231] Length = 364 Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 102/367 (27%), Positives = 194/367 (52%), Gaps = 27/367 (7%) Query: 12 AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH---GK 68 +G+W ++ + + N + S ++L I+ +DT GA ++ + Sbjct: 13 SGDWSVERLAAVERQIRR--NAPMTSGEWRINLGEISTLDTAGAVMVQRLCRRLRTAGAS 70 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC-- 126 ++L+ VS + L++ ++ ++P + N +G+++ D C Sbjct: 71 VQLEDVSAERHAVLKLVA--SEMEVTPRRP--------YSNPLERLGRRV----TDGCFG 116 Query: 127 --SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G + +++ ++ + +++ ++ GV +P++ L++F+ G V+A Sbjct: 117 ITEYLAFIGRLTADSLPRMLRPHRLRWHEIAV--ELERAGVMAIPIIGLLAFLIGIVMAY 174 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q L +GA IF +DL+ ++ LRE+G L+TAV++AGR+G++ A+IG+M + EE+DA+ Sbjct: 175 QSGDILQTYGANIFLVDLLGVIILREMGPLMTAVIVAGRTGASYTAQIGTMHLTEEVDAL 234 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 RTMG+ +L+ P+ AL+I+LPLLT+ A+ ++G +V Y + F VF R T Sbjct: 235 RTMGVTPFEMLVLPKFLALLIALPLLTVWADAIGLLGGMLVSSLLYGVDFDVFLRRL-PT 293 Query: 305 ATLANIF-TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 A N+F G+ KAP A I + +GF + ++ +G+ T VVQ I VI+ D++ Sbjct: 294 AVPPNMFWVGIAKAPVFAALIASIGCYQGFRIRYSADEVGRYTTISVVQGIFWVIVADAV 353 Query: 364 FAIFYFA 370 F+I F+ Sbjct: 354 FSIVLFS 360 >gi|91786141|ref|YP_547093.1| hypothetical protein Bpro_0230 [Polaromonas sp. JS666] gi|91695366|gb|ABE42195.1| protein of unknown function DUF140 [Polaromonas sp. JS666] Length = 383 Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 91/332 (27%), Positives = 180/332 (54%), Gaps = 13/332 (3%) Query: 43 DLSAITEIDTIGAELIM-YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 DLS + ++D +GA+++ ++ + +++++ + L ++ F + KP+ S Sbjct: 64 DLSGLEKLDHLGAQVLWNHWGRDWPAQLQVEPSQRAV--LETVAKFA----VVPPKPRGS 117 Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY 161 +K+L +G + + ++ S ++G ++ + + +G L +Y Sbjct: 118 ----DWKDLLVLLGNRALDLVDHSKGLVRLVGQLLLDIIRLV--RHPKEGPWRDLSGHLY 171 Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221 ++G + +P+ L+ F+ G V+A + QL QFGA+ + ++++ I +RE+G +L A++IA Sbjct: 172 HIGATALPITALVGFLIGVVLAYLISQQLRQFGADAYIVNILGISLIRELGPVLAAILIA 231 Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281 GRSGSAI A+IG M++ EE+DA+R MG+ L+ PR AL + +PL+++ +A++G Sbjct: 232 GRSGSAITAQIGVMRVTEELDAMRVMGIARGFRLVMPRALALAVVMPLISVWTTIAALLG 291 Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341 + + + F + AN+ K+ I +V G V ++ S Sbjct: 292 GMLAADISMGVTPSYFINSLPRAVDAANLTLATGKSVVFGVLIAMVGCHYGLRVKPNTES 351 Query: 342 LGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 LG+ T VV SI++VI++D+LFA+ + ++GI Sbjct: 352 LGQGTTASVVTSITVVILVDALFAVVFKSVGI 383 >gi|77920339|ref|YP_358154.1| ABC transporter permease [Pelobacter carbinolicus DSM 2380] gi|77546422|gb|ABA89984.1| ABC-type transport system, permease component [Pelobacter carbinolicus DSM 2380] Length = 386 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 80/214 (37%), Positives = 128/214 (59%), Gaps = 1/214 (0%) Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219 M GV+ +P+V LISF+ G ++A Q + QFG EI+ +L ++ LRE+G L+TA++ Sbjct: 174 MEKAGVNSLPIVGLISFLIGLIMAFQATIPMRQFGVEIYVANLTALSMLRELGPLMTALL 233 Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279 +AGRS SA AE+G+MKINEEIDA+ TMGL + L+ R+ A +I LPLL++ AN + Sbjct: 234 LAGRSSSAFAAELGTMKINEEIDALTTMGLAPIPFLVVTRVLATVIILPLLSLFANLMGL 293 Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339 IG ++V+ P + ++ + L ++ GL+K A + V G + Sbjct: 294 IGGAVVLLS-LGYPLVTYTNQVKAAVNLGDLTGGLVKTLVFALIVAGVGCLYGLKTRSGA 352 Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 +++G T VV I ++++ D LFA+ Y+ +GI Sbjct: 353 SAVGDSATRAVVSGIILIVVADGLFAVVYYFLGI 386 >gi|313109004|ref|ZP_07794978.1| hypothetical protein PA39016_001650017 [Pseudomonas aeruginosa 39016] gi|310881480|gb|EFQ40074.1| hypothetical protein PA39016_001650017 [Pseudomonas aeruginosa 39016] Length = 240 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 92/218 (42%), Positives = 137/218 (62%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 S+I Q+ V +P+V L+SF+ G V+A GA L+ FGA IFS+ L++ +RE GVL Sbjct: 22 SVIAQIQRSAVDAIPIVALLSFMVGMVVAFLGATVLANFGASIFSVHLVAFSFMREFGVL 81 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 L A++IAGR+ SA A+IGSMK NEEIDA+R+ LD + +L+ PR+ AL++SLPLLT++ Sbjct: 82 LPAILIAGRTASAYTAQIGSMKANEEIDALRSNALDPIELLVLPRVLALLVSLPLLTLVG 141 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 + I G + V +IP A F + + + G+ K+P A I + EGF Sbjct: 142 ILAGIAGGATVCALSLEIPPAQFLAIVQEKIEVRHFLVGMSKSPLFAVMIAAIGCHEGFK 201 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 V + S+G T+ VVQSI +VI+ID++ A+F+ +G Sbjct: 202 VAGSAESVGDHTTSSVVQSIFMVILIDAIAALFFMEMG 239 >gi|172061853|ref|YP_001809505.1| hypothetical protein BamMC406_2812 [Burkholderia ambifaria MC40-6] gi|171994370|gb|ACB65289.1| protein of unknown function DUF140 [Burkholderia ambifaria MC40-6] Length = 374 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 103/376 (27%), Positives = 179/376 (47%), Gaps = 35/376 (9%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 R G W + ++ V + + DLS I +D +G + + + G+ Sbjct: 21 RLYGQWTALALARNRGAVARRVAGIASGRVSEWDLSGIERLDHVGGQALW----RVWGRK 76 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 GV+ Q ++ R + + P+R + L + + F Sbjct: 77 LPDGVALSTTQR-TIFERIERLDSQREAPERVVHFGPITRLGFML----FAFAEHLQGGI 131 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQ------------MYYVGVSGVPVVILISFV 177 + GLVI + LS++R+ +Y G +P+ L++F+ Sbjct: 132 AMFGLVILDA--------------LSVLRRPKTMPWKETSANIYSAGAQALPITALVAFL 177 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V++ A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ Sbjct: 178 IGIVLSYLSAQQLQTFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRV 237 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EE+DA+R MG+ LI PR+ AL +++PLL + N A+ G ++ I F Sbjct: 238 TEELDAMRVMGIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDINYF 297 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 +AN++ G+ K I +VA GF + +S SLG+ TT VV SI++V Sbjct: 298 VRSLPGVVPIANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVV 357 Query: 358 IIIDSLFAIFYFAIGI 373 I+ D++FAI + +G+ Sbjct: 358 ILADAVFAIMFQNVGL 373 >gi|121603099|ref|YP_980428.1| hypothetical protein Pnap_0182 [Polaromonas naphthalenivorans CJ2] gi|120592068|gb|ABM35507.1| protein of unknown function DUF140 [Polaromonas naphthalenivorans CJ2] Length = 382 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 92/331 (27%), Positives = 176/331 (53%), Gaps = 11/331 (3%) Query: 43 DLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF 102 LS + ++D +GA+ +++ +H LQ L ++ FT ++ P R Sbjct: 63 SLSPLEKLDYLGAQ-VLWSAWNHHWPAGLQIEPEQRAMLETVEKFT----VRPLPPPRPS 117 Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162 + +G++++ ++ + +LG ++ + G + +G L +Y Sbjct: 118 WLEPV----LMLGERLLSLLSHAKGMLRLLGQLLLDMGRLV--RHPQQGPWRDLSGHLYN 171 Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 G + +P+ L+ F+ G V+A + QL QFGA+ F ++++ I +RE+G +L A++IAG Sbjct: 172 FGATALPITALVGFLIGVVLAYLISQQLRQFGADAFIVNILGISLIRELGPVLAAILIAG 231 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 RSGSAI A+IG M++ EE+DA+R MG+ L+ PR AL + +PL+++ +A++G Sbjct: 232 RSGSAITAQIGVMRVTEELDAMRVMGIARGFRLVMPRAMALALVMPLISVWTTIAALLGG 291 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 + + + FF+ + ++N+ K+ I ++ G V ++ SL Sbjct: 292 MLAADISMGVTPSFFFNALPAAVKVSNLVLATAKSVVFGLLIALIGCHYGLRVKPNTESL 351 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 G+ T VV SI++VI++D+LFA+ + ++GI Sbjct: 352 GQGTTASVVTSITVVILVDALFAVLFKSVGI 382 >gi|148261999|ref|YP_001236126.1| hypothetical protein Acry_3017 [Acidiphilium cryptum JF-5] gi|146403680|gb|ABQ32207.1| protein of unknown function DUF140 [Acidiphilium cryptum JF-5] Length = 362 Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 91/336 (27%), Positives = 169/336 (50%), Gaps = 27/336 (8%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 +DLS IDT GA L++ + G+ + QG++ E L + +++ P+ Sbjct: 48 LDLSRAARIDTSGAALLLALERGHDGETRWQGLTPAAEGLIA--------RLRAALPETG 99 Query: 102 FFYNSFKNLH-----YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156 + + +G +I F ++ +++ TG + G + Sbjct: 100 APPPPPRTVRGPGPLRTLGVRI-AFFGET---------ILATTGLPARRRFLRGG---NF 146 Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 R G +P+VI++ F+ G ++A Q A + QFGA+I+ L+S+ RE+G LL Sbjct: 147 FRIAERAGAQALPLVIMLGFLIGMILAFQSAIPMRQFGADIYVAALVSLSLFRELGPLLA 206 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV++AGR+GSA AE+G+M +NEE+ A+ TMG+D +L+ PR+ A ++ +P L + + Sbjct: 207 AVILAGRTGSAFAAELGTMMVNEEVAALTTMGIDPGTMLVIPRMAAAMLVMPALALGIDV 266 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 S ++G V+ P + ++ + ++ GL+K+ A+G++ + G G Sbjct: 267 SGVLGMGFVM-GILGFPPSAIVAQMQMATSPHDVLLGLMKSVVFGAAVGLIGCRAGLTAG 325 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 ++G+ T+ VV I I++D LFA+ + +G Sbjct: 326 GGPRAVGEAATSAVVGGIVATILLDGLFAVILYRLG 361 >gi|94309017|ref|YP_582227.1| hypothetical protein Rmet_0072 [Cupriavidus metallidurans CH34] gi|93352869|gb|ABF06958.1| ABC transporter, inner membrane subunit [Cupriavidus metallidurans CH34] Length = 376 Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 104/332 (31%), Positives = 172/332 (51%), Gaps = 15/332 (4%) Query: 44 LSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQ--LFSLISFTHRKKIKNQKPQRS 101 L IT +D IGA+LI + ++G + VS + Q +F+ I+ + K +R Sbjct: 58 LDGITRLDHIGAQLIW---QAWNGHMP-DNVSLNDGQKRVFARIAGLRTEGWKKHMVER- 112 Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY 161 +N +G ++ F+ +LG ++ + F + + G + +Y Sbjct: 113 --FNPVTI----VGASVLSFLAQLGVGVTMLGQLVFDLLRFLRAPQR--GPWREISANIY 164 Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221 VG + + L++F+ G V++ A QL FGA F ++++ + +RE+G +L A++IA Sbjct: 165 NVGYKALGITALVAFLIGIVLSYLSANQLRIFGASTFIVNILGMAVIRELGPVLAAILIA 224 Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281 GRSGSAI A+IG M++ EE+DA+ MG+ L+ PR+ AL IS+PLL + A+ G Sbjct: 225 GRSGSAITAQIGVMRVTEELDAMSVMGISHGFRLVMPRVIALAISMPLLVAWTDLLALFG 284 Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341 + DI + F + +AN++ GL K I + A G V ++ S Sbjct: 285 GMVAARLQLDISYVYFLRQLPDAVPVANLWFGLCKGVVFGMLIALTACHFGLRVKPNTQS 344 Query: 342 LGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 LG+ T VV SI++VII D++FAI + IGI Sbjct: 345 LGQGTTASVVTSITVVIIADAVFAILFKDIGI 376 >gi|323700846|ref|ZP_08112758.1| protein of unknown function DUF140 [Desulfovibrio sp. ND132] gi|323460778|gb|EGB16643.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans ND132] Length = 381 Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 95/337 (28%), Positives = 176/337 (52%), Gaps = 19/337 (5%) Query: 43 DLSAITEIDTIGAELIMYFME---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 D +T +D G L++ E + I+L + +L L T K ++ + + Sbjct: 58 DCGGVTYMDGSGVALLLKLKELCAEKKAAIELTNLREEDSRLVDLTWDTALPKQRDSERE 117 Query: 100 RSFFYNSFKNLH---YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156 R + +H ++++ F+ +S S +LG + G ++K +L+ Sbjct: 118 RRGLAEAVGAAGGELWHNVREMIAFVGESFS---LLGRAAVHPG-----MVRWKDVVLAC 169 Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I VGV + +++LI F+ G +++ Q A L +FG EIF +++ ++ RE+G L+T Sbjct: 170 IN----VGVESMFIIVLIGFLMGLIMSFQSAISLQRFGGEIFVPNMLGLVMFREMGPLVT 225 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 ++++A RSGSA AEIG+MKINEE+DA+ TMGL +R L+ P++ A + +PL+T+ N Sbjct: 226 SILLAARSGSAFAAEIGTMKINEELDALTTMGLSPMRFLVVPKLLATMAMVPLMTMFFNL 285 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 ++++G ++V+ P F SR + + + + G+ K + + V G Sbjct: 286 ASLVGGALVMLS-MGYPLVTFTSRVFANVSATDFWGGMAKGLVFSFLVAGVGCLRGMQTR 344 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 ++++G T+ VV I ++ D LFA+ Y+ +GI Sbjct: 345 SGASAVGLSTTSAVVSGIILIAFADGLFAVAYYYLGI 381 >gi|115353001|ref|YP_774840.1| hypothetical protein Bamb_2950 [Burkholderia ambifaria AMMD] gi|115282989|gb|ABI88506.1| protein of unknown function DUF140 [Burkholderia ambifaria AMMD] Length = 374 Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 103/376 (27%), Positives = 179/376 (47%), Gaps = 35/376 (9%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 R G W + ++ V + + DLS I +D +G + + + G+ Sbjct: 21 RLYGQWTALALARNRGAVARRVAGIASGRVSEWDLSGIERLDHVGGQALW----RVWGRK 76 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 GV+ Q ++ R + + P+R + L + + F Sbjct: 77 LPDGVALSPTQR-TIFERIERLDSQREAPERVVHFGPITRLGFML----FAFAEHLQGGI 131 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQ------------MYYVGVSGVPVVILISFV 177 + GLVI + LS++R+ +Y G +P+ L++F+ Sbjct: 132 AMFGLVILDA--------------LSVLRRPKTMPWKETSANIYSAGAQALPITALVAFL 177 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V++ A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ Sbjct: 178 IGIVLSYLSAQQLQTFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRV 237 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EE+DA+R MG+ LI PR+ AL +++PLL + N A+ G ++ I F Sbjct: 238 TEELDAMRVMGIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDINYF 297 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 +AN++ G+ K I +VA GF + +S SLG+ TT VV SI++V Sbjct: 298 VRSLPGVVPIANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVV 357 Query: 358 IIIDSLFAIFYFAIGI 373 I+ D++FAI + +G+ Sbjct: 358 ILADAVFAIMFQNVGL 373 >gi|238028752|ref|YP_002912983.1| hypothetical protein bglu_1g32160 [Burkholderia glumae BGR1] gi|237877946|gb|ACR30279.1| Hypothetical protein bglu_1g32160 [Burkholderia glumae BGR1] Length = 390 Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 100/333 (30%), Positives = 167/333 (50%), Gaps = 15/333 (4%) Query: 43 DLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQ--LFSLISFTHRKKIKNQKPQR 100 DLSAI +D +G + + + G GV Q +F I R + P+ Sbjct: 70 DLSAIERLDHVGGQALW----RVWGHRLPDGVVLTDNQRIVFERI---ERLDEAREAPEP 122 Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 ++ L G + +F + G VI + G +S + Sbjct: 123 VVRHDPVTRL----GLAMFQFGEHLFGGVAMFGRVILDLGAIARRPKTMPWTEISA--NV 176 Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 Y G +P+ L++F+ G V++ A QL QFGA + ++++ + +RE+G +L+A+++ Sbjct: 177 YNAGAKALPITALVAFLIGIVLSYLSAQQLQQFGANRYIVNILGLSVIRELGPVLSAILV 236 Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280 AGRSGSAI A+IG M++ EE+DA+R MG+ ++ PR+ AL +++PLL + N A+ Sbjct: 237 AGRSGSAITAQIGVMRVTEELDAMRVMGIPHGLRIVLPRVLALGVAMPLLVMWTNIVALS 296 Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 G ++ I F F +AN++ GL K I +V GF + +S Sbjct: 297 GGALAAKFALGIDFNFFMRSLPGVVPIANLWIGLGKGVVFGMLIALVGCHFGFRIKANSQ 356 Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 SLG+ TT VV SI++VI+ D++FAI + +G+ Sbjct: 357 SLGEGTTTSVVSSITVVILADAVFAILFQNVGL 389 >gi|301062341|ref|ZP_07203004.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300443545|gb|EFK07647.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 390 Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 100/384 (26%), Positives = 191/384 (49%), Gaps = 28/384 (7%) Query: 1 MSENGITVFRFAGNW----KSPEISEIADDVVMAINKSIQSDSAI----VDLSAITEIDT 52 +SE +F G+W K P IS A+ K + S++A+ D ++ D+ Sbjct: 24 LSEQKTLQIKFQGDWILENKRPSIS--------ALIKQMDSEAAVRQITFDTLGLSRWDS 75 Query: 53 IGAELIMYFMEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 + +EK K + +G+ +L L S KK ++K R F Sbjct: 76 ALLICLTKIIEKASQKDIPLDGKGLPEGAFKLLDLASTVPEKKGVHKKNGRPSFL----- 130 Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + +G + V F N +G + +F +F+ L+R + G+ +P Sbjct: 131 --FQVGSESVAFFNSFLEALGFVGEAFNAFSKFLTGKARFRRS--DLMRIIQDCGIEALP 186 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +V LIS + G ++A GA QL+ FGA+I+ +L+ I +R +G ++ +++AGR+G+A Sbjct: 187 IVSLISLLVGLILAFVGAVQLTMFGAQIYVANLVGIAMVRVMGAVMAGIIMAGRTGAAFA 246 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A++G+M++NEEIDA +TMG+ + L+ PR+ AL + +PLL + A+ I+G IV Sbjct: 247 AQLGTMQVNEEIDAFKTMGISPMEFLVLPRMLALTLMMPLLCLYADLMGILGGFIVGVGM 306 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 D+ ++++ + TL++++ G++++ + + G G ++++G T+ Sbjct: 307 LDLNMMEYYNQTKAAVTLSDLWIGIVQSAVFGMLVALAGCLRGMQCGRSASAVGDATTSA 366 Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373 VV I +I+ ++ + +GI Sbjct: 367 VVTGIVSIIVATAVITVITNMMGI 390 >gi|119897982|ref|YP_933195.1| hypothetical protein azo1691 [Azoarcus sp. BH72] gi|119670395|emb|CAL94308.1| conserved hypothetical membrane protein [Azoarcus sp. BH72] Length = 365 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 78/215 (36%), Positives = 125/215 (58%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 +Y V V +PV L+ F+ G V++ A QL FGA+IF ++++ + +RE+G +L +V Sbjct: 149 NLYKVAVRAMPVTALVGFLIGVVLSYLSALQLRAFGADIFIVNILGLGIIRELGPVLVSV 208 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++AGRSGSA+ A++G M++ EEIDA+ MG+ L+ P++ AL +++PLL + + A Sbjct: 209 LVAGRSGSAMTAQLGVMRVTEEIDALAAMGISASLRLVLPKVLALTLAMPLLVLWTSAVA 268 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 + G + W + F F LAN+F GL K I +VA G V + Sbjct: 269 LFGGMVSAWMELGMSFGFFLETLPRVVPLANVFVGLTKGLVFGLLISLVACHFGLRVKPN 328 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + SL T VV +I++VI++D+LFAI IG+ Sbjct: 329 TESLSANTTASVVTAITVVILVDALFAIATRRIGV 363 >gi|297538919|ref|YP_003674688.1| hypothetical protein M301_1733 [Methylotenera sp. 301] gi|297258266|gb|ADI30111.1| protein of unknown function DUF140 [Methylotenera sp. 301] Length = 378 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 118/384 (30%), Positives = 193/384 (50%), Gaps = 39/384 (10%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S N + +G W + + I + + AI +I+ + + D S + +D GA + Sbjct: 12 SMNALPNLTLSGAWVASTLHNIVEKI-HAIPTTIELN-IVADGSGVEALDMSGA----WV 65 Query: 62 MEKYHGKIKLQGVS--------THIEQLFSLI-SFTHRKKIKNQ---KPQRSFFYNSFKN 109 M+ +K QG S +E+L + F+H +N KP Sbjct: 66 MQSLFSLLKAQGNSITLIGFKPEFVERLKVVTYEFSHHANPQNNIEIKP---------PT 116 Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCAS-----SYKFKGFLLSLIRQMYYVG 164 L HIG + + ++ +G V S F AS +++ L + IR+ G Sbjct: 117 LLEHIGMATTEALKEAKDLLSFVGEVSS---VFLASFADPQRIRWRPILFN-IRE---AG 169 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 ++ VP+V +++F+ G V+A Q A QL +GA IF +DL+ I LRE L+ A++IAGRS Sbjct: 170 LNAVPIVGILAFLLGVVVAYQSADQLRHYGANIFVVDLIGISMLREFAPLIAAIIIAGRS 229 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 GSA A+IG+M + EEIDA+R +G+ + +L+ P++ L ISLPLLT+ A+ I G + Sbjct: 230 GSAYAAQIGTMSVTEEIDAMRILGIAPMEMLVLPKLIGLAISLPLLTVWADMLGIFGGML 289 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 D+ F F R + GL KA A I ++ +GF ++++G+ Sbjct: 290 TASAQLDVSFVDFVGRLVKAVEMTTYTVGLGKAFVFAIIITMIGCFQGFRTKGGADNVGR 349 Query: 345 KVTTCVVQSISIVIIIDSLFAIFY 368 + T VVQSI +VI+ D+LF++ + Sbjct: 350 QTTRSVVQSIFLVIVADALFSVLF 373 >gi|182416429|ref|YP_001821495.1| hypothetical protein Oter_4625 [Opitutus terrae PB90-1] gi|177843643|gb|ACB77895.1| protein of unknown function DUF140 [Opitutus terrae PB90-1] Length = 376 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 87/302 (28%), Positives = 158/302 (52%), Gaps = 15/302 (4%) Query: 74 VSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN--DSCSQAHI 131 + ++ L + ++ +H + + + F N + +K F+ C + Sbjct: 88 LPPRVQTLLTQLASSHATSVPHDRSVN--FLAVVGNATMELSRKTQDFVQFFGEC----V 141 Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG V + KF+ + +M G +P+V LI+F+ G +A GA L Sbjct: 142 LGAV-----KLLKRPDKFR--WRDCLEEMQQCGAMALPIVSLIAFLVGVTLAYIGALVLR 194 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 Q+G +I+ DL+ + +RE+G ++TAV++AGR+G+A A++G+MK NEEIDA+ T+G+ Sbjct: 195 QYGGDIYVADLIGMAMVREMGAVMTAVVLAGRTGAAFAAQLGNMKANEEIDALETLGISP 254 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V+ L+ PR+ AL + +PLL + AN I+G V DI + ++ + TL ++ Sbjct: 255 VQFLVMPRLLALGVMMPLLALYANALGILGGMAVSAGVLDISPSAYWVEMGTIVTLRDVA 314 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +G IKA +G+ G + +G+ T+ VV SI ++++ D++FA+ + I Sbjct: 315 SGFIKAIAFGGIVGLSGCLRGLQAERSAAGVGRAATSAVVTSILLLVVADAIFAVLFNVI 374 Query: 372 GI 373 G+ Sbjct: 375 GL 376 >gi|218961389|ref|YP_001741164.1| transporter, putative (modular protein) [Candidatus Cloacamonas acidaminovorans] gi|167730046|emb|CAO80958.1| transporter, putative (modular protein) [Candidatus Cloacamonas acidaminovorans] Length = 358 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 104/353 (29%), Positives = 179/353 (50%), Gaps = 16/353 (4%) Query: 21 SEIADDVVMAINKSIQSDSA-IVDLSAITEIDTIGAELIMYFMEKY--HGKIKLQGVSTH 77 +E + + +N ++ S +DLS I +D+ G + + G + QG + Sbjct: 18 AETVPETFIEVNSLLKHQSPNTIDLSNINVLDSAGVAFLDELNTRLSAEGILLFQGATPE 77 Query: 78 IEQLFSLISFTHRKKIKNQKPQRSF-FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVI 136 I+++ SF+ K IK P+R F+ + G+ F N + + + Sbjct: 78 IQEVID--SFSSLK-IKVPAPERKMGFFEKIGDSLVLAGQN---FYNVMLLASEVFYWAV 131 Query: 137 SNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE 196 G F + F + Q +G +P++ L+SF+ G +++ Q + QL+ FGA Sbjct: 132 --IGIFSRKGQRKGSFTI----QCSLLGSQALPILSLLSFIVGFILSLQASVQLANFGAN 185 Query: 197 IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILI 256 +F DLM+ +REI L+TA+++AGRSGSAI +EI +M++ EEIDA++TM L VR ++ Sbjct: 186 VFIADLMAFAMVREIAPLITAIIVAGRSGSAIASEIATMQVTEEIDALKTMALSPVRYVV 245 Query: 257 SPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316 P+ A+ + +P+L + + + IG ++ Y D+ F R + TL ++ T K Sbjct: 246 VPKFHAITVVMPILVMFSILVSEIGGGLIAIDYLDLSVYTFVQRSINVLTLKDLVTSFGK 305 Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + A I I+ GF V + +GK T+ VV SI VII D++F++ Y Sbjct: 306 SVIFAWTIVIIGAYCGFQVKGGAEGVGKATTSSVVASIFAVIIWDAIFSLLYL 358 >gi|224437093|ref|ZP_03658074.1| hypothetical protein HcinC1_03955 [Helicobacter cinaedi CCUG 18818] gi|313143563|ref|ZP_07805756.1| ABC transport system permease [Helicobacter cinaedi CCUG 18818] gi|313128594|gb|EFR46211.1| ABC transport system permease [Helicobacter cinaedi CCUG 18818] Length = 367 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 102/341 (29%), Positives = 176/341 (51%), Gaps = 17/341 (4%) Query: 31 INKSIQSDSAI-VDLSAITEIDTIGAELIMYFMEKYHGK-IKLQGVSTHIEQLFSLISFT 88 ++K I ++ I +D IT++D + I +E GK ++ + ++++F + + Sbjct: 32 LSKLISANERITLDFLEITKVDFVFCAFIYGLLE---GKDYEILNADSQVKEIFQSMVES 88 Query: 89 HRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYK 148 K ++ S FY + + GK + S + G+ + F S + Sbjct: 89 LPKLENSKSKSHSMFYGAL----FDFGKFCERSYQSSLDFLNFFGMC---SFYFFRSCWN 141 Query: 149 FKGFLLSLIRQMYYVGVSG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 + F L I MY++ SG +PV +L +F+ IA QG QL + G + S+++++ Sbjct: 142 LRHFKLGSI--MYHINESGFKALPVALLTAFIVSYAIALQGVLQLEKMGVPLMSVEIVAK 199 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 L LRE+G + A++IAGRS S+ A+IG M + EE DA++TM L +I PRI AL+I Sbjct: 200 LSLREMGPFILAIVIAGRSSSSFAAQIGVMNLTEENDALKTMNLSLFDYIILPRILALVI 259 Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325 +PLL LA+ ++ + I + F + RF+ + N + G+IKAPF A+ Sbjct: 260 IMPLLVFLADAVSLFACFLAINMQTGLDFMQYLERFYEYVGINNFWVGVIKAPFFGAAVA 319 Query: 326 IVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 +V G V + S+G + T VV +I VI+I+++F+I Sbjct: 320 LVGCFRGLYVKGDTESVGIETTKSVVNAIFWVILINAIFSI 360 >gi|328954405|ref|YP_004371739.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM 11109] gi|328454729|gb|AEB10558.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM 11109] Length = 418 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 106/340 (31%), Positives = 177/340 (52%), Gaps = 23/340 (6%) Query: 36 QSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK---IKLQGVSTHIEQLFSLI---SFTH 89 Q S +DL + +D+ GA ++ EK + L +S I+++ LI + TH Sbjct: 88 QLSSVGLDLGGLEYLDSAGALAVLQLAEKLKSQGIICTLDNISPKIKKILDLIDIQALTH 147 Query: 90 RKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKF 149 I K F + S +G+ + F D G ++ + C + Sbjct: 148 PPLITVGK---RFGWIS------QVGEASLAFWRDIIEVIAFFGELLLDLASVCLRPRRV 198 Query: 150 KGFLLSLIRQMYYV---GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206 + + M+Y+ GV G+P+V LI + G +IA + QL QFGA I+ L+ + Sbjct: 199 RWEYV-----MFYMKRAGVDGLPIVSLIGLLLGLIIAFMSSLQLQQFGANIYVASLLGVA 253 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 +RE+G ++TA+++AGRSGSA AEIGSMK++EE+DA+ MG + +R+L +P++ A ++ Sbjct: 254 MVRELGPIMTAILVAGRSGSAFAAEIGSMKVSEEVDALTVMGFNPMRMLTTPKVIASLVV 313 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326 +PLLTI A+ IIG IV D+ + TL + + IK+ A I Sbjct: 314 VPLLTIYADLLGIIGGLIVGVTMLDLTVYSYIQETRRILTLFDFTSSFIKSVVFAFLIAA 373 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + + GF V ++++G T+ VV +I ++I++DS+FAI Sbjct: 374 IGCQRGFQVRGGASAVGSATTSAVVAAIFLIIVVDSIFAI 413 >gi|317153918|ref|YP_004121966.1| hypothetical protein Daes_2214 [Desulfovibrio aespoeensis Aspo-2] gi|316944169|gb|ADU63220.1| protein of unknown function DUF140 [Desulfovibrio aespoeensis Aspo-2] Length = 431 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 106/376 (28%), Positives = 184/376 (48%), Gaps = 37/376 (9%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFME---K 64 F G +P + + D+ S S A+ D S I +D G L++ E + Sbjct: 75 FEIRGRLDAPGTAHVWDEASRV--ASAGSGGAVEADCSGIEYMDGSGMALLLKLREVVAE 132 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK-------- 116 G + L ++ QL I T + + P S + L +G+ Sbjct: 133 AGGTLSLVNLAPRHRQL---IDLTGDRPLPGWNPADS----ERRGLAERVGRATRDALTG 185 Query: 117 --KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 ++V+F+ ++ VI S ++K LLS + +VGV + ++ L+ Sbjct: 186 IREMVEFVGEAS--------VIITRSLLHPSRVRWKDVLLSCV----HVGVDSLFIISLL 233 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 F+ G +++ Q A L +FG EIF +++ ++ RE+G L+TA+++A RSGSA AEIG+ Sbjct: 234 GFLMGLIMSFQSAISLQRFGGEIFVPNMLGLVMFREMGPLVTAILLAARSGSAFAAEIGT 293 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 MKINEE+DA+ TMGL +R L+ P++ + + +PL+T+ N ++++G ++V+ P Sbjct: 294 MKINEELDALTTMGLSPMRFLVVPKLLSALAMVPLMTLFFNLASLVGGALVMLS-LGFPL 352 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F SR S ++ F G+ KA + + V G ++++G T+ VV I Sbjct: 353 VTFTSRVFSYVHYSDFFGGMAKALVFSILVAGVGCLRGMQTRSGASAVGLSTTSAVVTGI 412 Query: 355 SIVIIIDSLFAI-FYF 369 + D LFA+ FY+ Sbjct: 413 IFIAFADGLFAVAFYY 428 >gi|120609009|ref|YP_968687.1| hypothetical protein Aave_0306 [Acidovorax citrulli AAC00-1] gi|120587473|gb|ABM30913.1| protein of unknown function DUF140 [Acidovorax citrulli AAC00-1] Length = 375 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 92/332 (27%), Positives = 172/332 (51%), Gaps = 12/332 (3%) Query: 43 DLSAITEIDTIGAELIM-YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 DL ++ +D +GA+L+ ++ + +I L + L + FT + ++ P Sbjct: 55 DLRSVDWLDHVGAQLLWNHWGRVWPERIALD--DAQRDMLDRVAEFT----VIDRPPVPP 108 Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY 161 + + +G K++ + ++G ++ + G + + +S +Y Sbjct: 109 WRLVEEVD---RLGVKVLHALGHGRHLLELVGQLVIDLGSALRAPRRAPWRDVS--GHLY 163 Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221 +G + +P+ ++ F+ G V+A + QL QFGAE F ++++ I +RE+G +L A+++A Sbjct: 164 RMGATALPITAIVGFLIGVVLAYLMSLQLRQFGAESFIVNILGISLIRELGPMLAAILVA 223 Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281 GRSGSAI A+IG M++ EE+DA+R MG+ L+ PR AL I++PL+ + A+ G Sbjct: 224 GRSGSAITAQIGVMRVTEELDAMRVMGIPHGFRLVMPRAVALAIAMPLIAVWTTLCALAG 283 Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341 + D+ A F + +N+ + K+ I ++ G V ++ S Sbjct: 284 GMLAADIAMDVSPAYFVQALPNAVGFSNLVLAMAKSVVFGVGIALIGCHWGLRVKPNTQS 343 Query: 342 LGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 LG+ T VV +I++VII+D+LFAI + +GI Sbjct: 344 LGEGTTASVVNAITMVIIVDALFAIAFKNLGI 375 >gi|171322064|ref|ZP_02910936.1| protein of unknown function DUF140 [Burkholderia ambifaria MEX-5] gi|171092626|gb|EDT37930.1| protein of unknown function DUF140 [Burkholderia ambifaria MEX-5] Length = 427 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 104/374 (27%), Positives = 178/374 (47%), Gaps = 31/374 (8%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 R G W + ++ V + + DLS I +D +G + + + G+ Sbjct: 74 RLYGQWTALALARNRGAVARRVAGIATGRVSEWDLSGIERLDHVGGQALW----RVWGRK 129 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHY-------HIGKKIVKF- 121 GV+ Q ++ R + + P+R + + H+ I F Sbjct: 130 LPDGVALSPTQR-TIFERIERLDSQREAPERVVHFGPITRFGFMLFAFAEHLQGGIAMFG 188 Query: 122 --INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 I D+ S L NT + +S +Y G +P+ L++F+ G Sbjct: 189 LVILDALSV-----LRRPNTMPWKETSAN-----------IYSAGAQALPITALVAFLIG 232 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V++ A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ E Sbjct: 233 IVLSYLSAQQLQTFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTE 292 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DA+R MG+ LI PR+ AL +++PLL + N A+ G ++ I F Sbjct: 293 ELDAMRVMGIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDINYFVR 352 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 +AN++ G+ K I +VA GF + +S SLG+ TT VV SI++VI+ Sbjct: 353 SLPGVVPIANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVIL 412 Query: 360 IDSLFAIFYFAIGI 373 D++FAI + +G+ Sbjct: 413 ADAVFAILFQNVGL 426 >gi|32266623|ref|NP_860655.1| hypothetical protein HH1124 [Helicobacter hepaticus ATCC 51449] gi|32262674|gb|AAP77721.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 348 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 93/297 (31%), Positives = 154/297 (51%), Gaps = 8/297 (2%) Query: 73 GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHY---HIGKKIVKFINDSCSQA 129 G +T ++F +S + K+ + +F S K H +GK+I +F + Sbjct: 50 GTNTRTNEIFQTLSSSLPKENEENAINNAF---SLKISHMVLIPLGKRIEQFFESFLNFL 106 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 + G+ + S +FK S+ M G +PV +L +F+ IA QG Q Sbjct: 107 NFCGMCLWYFFLSLLSPRRFKCG--SIFYHMNEAGFKALPVALLTAFIVSYAIALQGVLQ 164 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L + G + S+++++ L LRE+G + A++IAGRS SA A++G M + EE DA++TM L Sbjct: 165 LEKMGVPLMSVEIVAKLSLRELGPFILAIVIAGRSSSAFSAQLGVMNLTEENDALKTMNL 224 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 LI PR+ ALII +PLL LA+ ++ A + + I F + RF+ + + Sbjct: 225 SLFDYLILPRVLALIIVMPLLVFLADSVSLFAAMLAVKMQTGINFMQYLERFYEYVGINH 284 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 G+IKAPF AI +V G V + S+G + T VV ++ VI+I+++F++ Sbjct: 285 FLVGMIKAPFFGAAIALVGCFRGLYVKGDTESIGLETTKSVVNALFWVILINAIFSV 341 >gi|326315184|ref|YP_004232856.1| hypothetical protein Acav_0366 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372020|gb|ADX44289.1| protein of unknown function DUF140 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 375 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 93/337 (27%), Positives = 171/337 (50%), Gaps = 22/337 (6%) Query: 43 DLSAITEIDTIGAELIM-YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 DL + +D +GA+L+ ++ ++ ++ + G + + + + T R + P R Sbjct: 55 DLRGVEWLDHVGAQLLWNHWGREWPERLSVDGAQRDMLERVAEYTVTRRPP---ESPWR- 110 Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKF-----KGFLLSL 156 L + + VK ++ H+L LV G+ + + + Sbjct: 111 --------LAEEVDRLGVKVLSALGHGRHLLELV----GQLMIDLVRVVRAPRRAPWRDI 158 Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 +Y +G + +P+ ++ F+ G V+A + QL QFGAE F ++++ I +RE+G +L Sbjct: 159 SGHLYRMGATALPITAIVGFLIGVVLAYLMSLQLRQFGAESFIVNILGISLIRELGPMLA 218 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A+++AGRSGSAI A+IG M++ EE+DA+R MG+ L+ PR AL I++PL+ + Sbjct: 219 AILVAGRSGSAITAQIGVMRVTEELDAMRVMGIPHGFRLVMPRAVALAIAMPLIAVWTTL 278 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 A+ G + ++ A F + +N+ + K+ I ++ G V Sbjct: 279 CALAGGMLAADIAMNVSPAYFVQALPNAVGFSNLVLAMGKSVVFGVGIALIGCHWGLRVK 338 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 ++ SLG+ T VV +I++VII+D+LFAI + +GI Sbjct: 339 PNTQSLGEGTTASVVNAITMVIIVDALFAIAFKNLGI 375 >gi|254496222|ref|ZP_05109116.1| ABC transporter, permease [Legionella drancourtii LLAP12] gi|254354527|gb|EET13168.1| ABC transporter, permease [Legionella drancourtii LLAP12] Length = 375 Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 108/370 (29%), Positives = 183/370 (49%), Gaps = 26/370 (7%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEKY 65 F G W ++ + + + Q V+ I+ +D+ GA ++ +++ Sbjct: 17 FNCTGRWSVMDVGSLLKKITASTLPKTQKIK--VNGEGISHLDSAGALALIKCVNALKQR 74 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 ++ L G S +QL LI + + Q P +N Y +GK+ Sbjct: 75 DNEVALVGFSKIQQQLLDLIQ-EKQGILDYQIPSPPK-----ENFLYKLGKE------SE 122 Query: 126 CSQAHILGLVISNTGEFCASSY----KFKGFLL-SLIRQMYYVGVSGVPVVILISFVTGA 180 A + GL+I G+ + ++ F S++ + G+ +P++ L+SF+ G Sbjct: 123 TKLAQVDGLIIL-IGDLATKLFDAFGNWRRFQWPSIMSNIDATGIKALPILALLSFLIGV 181 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A Q QL+ +GA F L + RE L+TA+++AGR+ SA A++GSMK+NEE Sbjct: 182 VLAYQMGLQLTTYGANSFIAYLSGMAIFREFAPLITAIIVAGRTSSAYTAQLGSMKVNEE 241 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ TMGL +L+ P++ L+I+ PLL A+ +I+G+ I+ I F F R Sbjct: 242 IDALLTMGLSPTELLVLPKVLGLLIAFPLLIFWADIFSILGSMIMANNMLGIGFLDFLQR 301 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV--GVHSNSLGKKVTTCVVQSISIVI 358 + ++ GL KAP A I +V +GF V G N +G + T VVQS+ ++I Sbjct: 302 LRDSVGISQFKLGLYKAPAFALLIALVGCFQGFRVEAGTEKN-IGSQTTKSVVQSLFLII 360 Query: 359 IIDSLFAIFY 368 I D++++I Y Sbjct: 361 IADAIYSIIY 370 >gi|315927603|gb|EFV06934.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 194 Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 81/193 (41%), Positives = 117/193 (60%) Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A Q A+QL+QFGA IF +DLM I RE+ L+ A++IAGRS S+ A+IG MKI +E Sbjct: 2 VLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDE 61 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 I A+ TMG ++ PR+ AL++++PL+ +++ +IIG +V DI FA F R Sbjct: 62 IAAMNTMGFRSFEFIVIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRR 121 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 F + +IF GL KAP IG++A GF V + S+G T VV +I VI Sbjct: 122 FREAVDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAF 181 Query: 361 DSLFAIFYFAIGI 373 D+LF++ + GI Sbjct: 182 DALFSVILTSTGI 194 >gi|225165545|ref|ZP_03727365.1| protein of unknown function DUF140 [Opitutaceae bacterium TAV2] gi|224800218|gb|EEG18628.1| protein of unknown function DUF140 [Opitutaceae bacterium TAV2] Length = 371 Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 85/263 (32%), Positives = 143/263 (54%), Gaps = 2/263 (0%) Query: 99 QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158 Q ++ NL IG+ ++ ++ + LG + + KF+ S Sbjct: 111 QAEPAHDRRTNLLTSIGEATIETVDRATGIMSFLGECLLSFFHLARRPRKFRWGDCS--E 168 Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 +M G +P+V LISF+ G ++A Q A + QFGA+I+ D ++++ RE+G ++T + Sbjct: 169 EMQQCGAMALPIVGLISFLVGVIMAYQSAVLMRQFGADIYVADAVALVMAREMGAMMTGI 228 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++AGR+G+A A IG+MK NEEIDA+ T G+ V L+ PR+ AL + +PLLT+ AN Sbjct: 229 ILAGRTGAAFAATIGNMKANEEIDALSTFGIRPVDFLVLPRLVALALMMPLLTLYANALG 288 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 I+G V DIP ++++ + L++I TGLIKA +G+ G Sbjct: 289 IVGGMGVAMGVLDIPPITYWNQTVNALDLSDISTGLIKASCFGILVGLSGCHRGMNADRS 348 Query: 339 SNSLGKKVTTCVVQSISIVIIID 361 ++ +G+ T+ VV + ++II D Sbjct: 349 ASGVGRAATSAVVIGMLLIIIAD 371 >gi|308272474|emb|CBX29078.1| hypothetical protein N47_J00590 [uncultured Desulfobacterium sp.] Length = 381 Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 87/210 (41%), Positives = 126/210 (60%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I M GV+ +P++ LISF+ G VIA + QL QFGA ++ L+SI + E+G ++T Sbjct: 166 ILHMEKTGVNALPIIALISFLLGLVIAFMSSLQLEQFGANLYVASLVSIGMVSELGPIMT 225 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++IAGRSGSA AEIG+MKI+EE DA+ MG D L PRI A II +PLLT+ A+ Sbjct: 226 AIVIAGRSGSAFAAEIGTMKISEETDALFVMGFDPTLFLAVPRILASIIVVPLLTLFADI 285 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 AI G +V D+ + + ++ + L I G+ K+ A I V GF Sbjct: 286 FAIAGGLVVGVFILDLTTSSYLTQTMNVLNLFEICWGISKSIVFAVIISWVGCLRGFQTK 345 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 ++++G T+ VV SI ++I+IDS+FAI Sbjct: 346 GGADAVGNAATSAVVSSIFLIILIDSMFAI 375 >gi|217970678|ref|YP_002355912.1| hypothetical protein Tmz1t_2277 [Thauera sp. MZ1T] gi|217508005|gb|ACK55016.1| protein of unknown function DUF140 [Thauera sp. MZ1T] Length = 371 Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 100/365 (27%), Positives = 180/365 (49%), Gaps = 14/365 (3%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 R AG+W + E + A+ ++ D A L A+ +D+ GA + + + G+ Sbjct: 18 RLAGDWTLRGLDECLPTLRRAL-ATVPPD-ARWSLRAVRRMDSFGA---LLLWQAWGGRW 72 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKN-QKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + ++ ++I + +P R+ ++ L GK + F Sbjct: 73 PAALEADDAQR--AIIGRIENASARALPEPPRASALDAVALL----GKGLFAFAGHLSGF 126 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +LG ++ + G + LL + ++ VGV +PV L+ F+ G V++ A Sbjct: 127 VALLGRLVLDLGHLLHHPRDWP--LLEISANLHKVGVKAMPVSALVGFLIGVVLSYLSAL 184 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 QL FGA+ F ++++ + +RE+G +L +V++AGRSGSA+ A++G M++ EEIDA+ MG Sbjct: 185 QLRTFGADAFIVNILGMGIIRELGPVLVSVLVAGRSGSAMTAQLGVMRVTEEIDALAAMG 244 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + L+ P++ AL +++PLL + + A+ G + W I F +A Sbjct: 245 VSRSLRLVLPKVVALSLAMPLLVLWTSAIALFGGWVSAWVELGIGLQFFLRALPDAVPVA 304 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 N++ GL K I +VA G V + SL T VV +I++VI++D++FAI Sbjct: 305 NLYIGLAKGAVFGFLIALVACHFGLRVKPDTESLSANTTASVVAAITVVILVDAVFAIAT 364 Query: 369 FAIGI 373 +IG+ Sbjct: 365 RSIGL 369 >gi|218780630|ref|YP_002431948.1| hypothetical protein Dalk_2788 [Desulfatibacillum alkenivorans AK-01] gi|218762014|gb|ACL04480.1| protein of unknown function DUF140 [Desulfatibacillum alkenivorans AK-01] Length = 377 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 104/367 (28%), Positives = 183/367 (49%), Gaps = 22/367 (5%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 ++ R G +A + AI K + ++DL +T +D GA L+ + + H Sbjct: 18 SILRLHGPLDQDAYFALAGPLRQAIKKGCAGE-LVIDLKDVTRLDDFGALLLAHVHKAAH 76 Query: 67 G---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 ++ + ++ L+ F ++ I ++ N F L I K++ Sbjct: 77 AVNSPCSIEAARPSVREVLDLLHF--QRLINAPALEKPKHENPFVALGGAIIDKVLGAKE 134 Query: 124 DSCSQAHILGLVISNTGE--FCAS---SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 +I TG+ CA+ + F ++ M VGV VP+V LI+F+ Sbjct: 135 -----------LIDFTGDVLLCAAIVVRHPFSMRWDDMLTAMRKVGVDAVPIVGLINFLL 183 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G ++A + QL QFGA I+ L++I +RE+G ++TA+++ GRSGSA +EIG+MKI+ Sbjct: 184 GFIMAFMTSVQLKQFGANIYVAPLVAIAMVRELGPIMTAIVVTGRSGSAFASEIGAMKIS 243 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE+DA+ TMG + V L+ P++ A +I +P+LT+ A I+G +V + D+ + + Sbjct: 244 EEVDALSTMGFNPVVFLVMPKMTAAMIVMPILTVFACLFGILGGLLVGVVFLDLTLSNYL 303 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 S + ++ + KA A I + GF V S+++G+ T+ VV I ++I Sbjct: 304 SETIDSLSMYAVNWCFFKAVVFAFLITWIGCLRGFQVKGGSSAVGEATTSSVVSGIFLII 363 Query: 359 IIDSLFA 365 + D +FA Sbjct: 364 LWDCIFA 370 >gi|297569477|ref|YP_003690821.1| protein of unknown function DUF140 [Desulfurivibrio alkaliphilus AHT2] gi|296925392|gb|ADH86202.1| protein of unknown function DUF140 [Desulfurivibrio alkaliphilus AHT2] Length = 368 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 75/215 (34%), Positives = 125/215 (58%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 MY VGV +PV L+ F+ G V++ A QL FG E++ ID++ + +RE+G +L A+ Sbjct: 152 NMYKVGVKAMPVAALVGFLIGVVLSYLSAMQLEAFGVEVYLIDILGLGIIRELGPVLVAI 211 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++AGRSGSA+ A++G M++ EEIDA+ MG+ L+ P++ AL + +PLL + + A Sbjct: 212 LVAGRSGSAMTAQLGVMRVTEEIDALAAMGISRTIRLVLPKVLALTLVMPLLVLWTSAVA 271 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 ++G + I FA F + +AN++ GL K I +VA G + + Sbjct: 272 LLGGMLSANMQLGISFAFFMEKLPQVVPIANLYIGLGKGAVFGLLIALVACHFGLRIRPN 331 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + SL T VV +I+ VI++D++FA+ +G+ Sbjct: 332 TESLAAHTTASVVTAITTVILVDAVFAVMLRNVGV 366 >gi|195952560|ref|YP_002120850.1| protein of unknown function DUF140 [Hydrogenobaculum sp. Y04AAS1] gi|195932172|gb|ACG56872.1| protein of unknown function DUF140 [Hydrogenobaculum sp. Y04AAS1] Length = 327 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 111/343 (32%), Positives = 173/343 (50%), Gaps = 27/343 (7%) Query: 31 INKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHR 90 I+ SI +D+ I ++DT GA ++ +EKY K +L G HIE + Sbjct: 12 IDVSIFIKEHTIDIKDIEKLDTFGAIFVLELLEKYKDK-ELVGKKEHIEFI--------- 61 Query: 91 KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFK 150 QK + YN+ K K IN S + +G+++ ++ + +F+ Sbjct: 62 -----QKVKELLKYNNEKT-------KKDSNINLSLTFLEYIGILVYHSFK-NIKDIEFE 108 Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210 FL +++ G+ + ++ ++SF+ G VIA Q A +L FGA IF ++L+ I RE Sbjct: 109 SFL----KEVESSGIGSLFILAVLSFLVGIVIAYQSANELISFGANIFIVNLIGISAFRE 164 Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 +G L+T +++AGR S A IG + EEIDAI M + + PRI L + PLL Sbjct: 165 LGPLITGIILAGRVSSGYTANIGIRNVYEEIDAIEVMSISPYVVFGLPRIITLTLITPLL 224 Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330 + ++ ++G +I+ DIPF +FF R +F GL+KAPF IG+V Sbjct: 225 VLFSSNVMVLGGAIIANTSLDIPFDMFFDRLREVVGFNQVFVGLVKAPFFGAYIGLVGTY 284 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 GF G + V VV SIS +I+ID+LF+I + IGI Sbjct: 285 FGFYSGKKPEDVTLNVMKSVVISISGIIVIDALFSIIFAKIGI 327 >gi|312797432|ref|YP_004030354.1| ABC transporter permease protein [Burkholderia rhizoxinica HKI 454] gi|312169207|emb|CBW76210.1| ABC transporter permease protein [Burkholderia rhizoxinica HKI 454] Length = 390 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 101/370 (27%), Positives = 184/370 (49%), Gaps = 18/370 (4%) Query: 10 RFAGNWKSPEIS------EIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 R G W + ++ IA + + + ++D+ + DLS I +D +GA+ ++ + Sbjct: 32 RLGGQWTALSLALDQRRGGIAAKLRTLRDAAARADT-LWDLSPIQRLDHVGAQ-ALWQIW 89 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 H L T ++F I+ + + +P + + +G + F Sbjct: 90 GRHLPCGLSLTDTQ-REIFERIALLDATR-EPAEPAAAI------DPITRLGLAVFGFAG 141 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 +LG ++ + G + +S +Y G +P+ L++F+ G V++ Sbjct: 142 HLRDGITLLGGLVIDCGRLLRDPRRIPWSEIS--ANVYAAGAQALPITALVAFLIGIVLS 199 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 A QL FGA + ++++ + +RE+G +L A+++AGRSGSAI A++G M++ EE+DA Sbjct: 200 YLSAQQLRLFGANAYIVNILGLSIIRELGPVLAAILVAGRSGSAITAQLGVMRVTEELDA 259 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R MG+ LI PR+ AL +++PLL I + A+ G + +I + F S Sbjct: 260 MRVMGISHGLRLILPRVIALGVAMPLLVIWTDAIALAGGMLAAQLVLNIDMSFFIRSLPS 319 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +AN++ GL K I +V G + +S SLG+ TT VV SI++V++ D++ Sbjct: 320 VVPVANLYLGLGKGVAFGMLIALVGCHFGLRIKPNSQSLGEGTTTSVVSSITVVMLADAV 379 Query: 364 FAIFYFAIGI 373 FAI + IG+ Sbjct: 380 FAIMFQRIGL 389 >gi|241661797|ref|YP_002980157.1| hypothetical protein Rpic12D_0175 [Ralstonia pickettii 12D] gi|240863824|gb|ACS61485.1| protein of unknown function DUF140 [Ralstonia pickettii 12D] Length = 374 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 104/376 (27%), Positives = 189/376 (50%), Gaps = 22/376 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVD------LSAITEIDTIGAEL 57 +G +V +G+W + ++E A + + Q A +D L+ + ID GA+L Sbjct: 15 DGRSVAFLSGDWTTLALAERA-----GVRSARQQIRAGLDNANAWCLTEVGRIDHFGAQL 69 Query: 58 IMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 + + G + + +Q ++ + K + + N L G+ Sbjct: 70 LW----RAWGNQWPEHLDARPDQR-RMLDRVAKLDPGGWKQRLAPRMNPVAIL----GEG 120 Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 ++ F + + + ++G ++ + G F + ++ G + +Y G + + L+ F+ Sbjct: 121 MLDFFDHASNGIAMVGQLVFDLGRFVRAPHR--GPWREISANIYSTGYKALGITALVGFL 178 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V++ A QL FGA IF ++++ + +RE+G +L A+++AGRSGSAI A+IG M++ Sbjct: 179 IGIVLSYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRV 238 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EE+DA+R MG+ LI P++ AL I++PLL + A+ G + DI F Sbjct: 239 TEELDAMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYF 298 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + +AN++ G+ K I +VA G + ++ SLG+ TT VV SI+IV Sbjct: 299 ITSLPDAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIV 358 Query: 358 IIIDSLFAIFYFAIGI 373 I+ D++FAI + +GI Sbjct: 359 ILADAVFAILFKDVGI 374 >gi|253828165|ref|ZP_04871050.1| inner membrane protein yrbE [Helicobacter canadensis MIT 98-5491] gi|313142364|ref|ZP_07804557.1| ABC transporter [Helicobacter canadensis MIT 98-5491] gi|253511571|gb|EES90230.1| inner membrane protein yrbE [Helicobacter canadensis MIT 98-5491] gi|313131395|gb|EFR49012.1| ABC transporter [Helicobacter canadensis MIT 98-5491] Length = 371 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 113/378 (29%), Positives = 187/378 (49%), Gaps = 24/378 (6%) Query: 3 ENGITVFRFAGNW--KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +N I + + +G W K P+ + D + N I+ ++L+ ++D G E++ Sbjct: 9 DNDIYILKLSGLWDYKIPKSLLLRLDSIKLTNVKIK-----IELAENFDLDFCGGEILER 63 Query: 61 FMEKYHGK-IKLQGV---STHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116 ++ K I L+ + +Q+F +++ T + +K Q F LH+ + Sbjct: 64 WILALESKNIVLENALKNHSKSQQIFQILA-TRKNPLKQDMVQ------DFIKLHWDSFQ 116 Query: 117 KIVKFINDSCSQAHILGLVISN--TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 I F DS G ++ + + + K L + + V + +V L Sbjct: 117 IIKGFFKDSLMAIGFFGEILYAWFSSLLQPKNIRLKATLYCIQESL----VKAIGIVALA 172 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 F+ G VIA QG+ QL QFGA I +++ S+L LRE+ ++TA++IAGRS SA AEIG Sbjct: 173 CFLIGIVIAYQGSIQLGQFGASILIVEMSSMLTLREMAPIITAIIIAGRSASAFSAEIGM 232 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 M+ +EIDA+R MG D + L+ PR+ AL + LPL+ +A+ ++GA +V I Sbjct: 233 MRATQEIDAMRVMGFDPITFLVLPRMLALCLVLPLVVFIADLFGLLGAMLVCQLQLGIGT 292 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F RF + + + G+ KAPF I V GF V + S+G T VV+SI Sbjct: 293 EQFVERFLQVVDMRHFWVGIAKAPFFGLIISFVGCFHGFIVAKDTRSIGVHTTKSVVESI 352 Query: 355 SIVIIIDSLFAIFYFAIG 372 +VI D+L ++ + +G Sbjct: 353 FLVIAFDALCSVVFTEMG 370 >gi|224418846|ref|ZP_03656852.1| toluene ABC transporter permease [Helicobacter canadensis MIT 98-5491] Length = 375 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 113/378 (29%), Positives = 187/378 (49%), Gaps = 24/378 (6%) Query: 3 ENGITVFRFAGNW--KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +N I + + +G W K P+ + D + N I+ ++L+ ++D G E++ Sbjct: 13 DNDIYILKLSGLWDYKIPKSLLLRLDSIKLTNVKIK-----IELAENFDLDFCGGEILER 67 Query: 61 FMEKYHGK-IKLQGV---STHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116 ++ K I L+ + +Q+F +++ T + +K Q F LH+ + Sbjct: 68 WILALESKNIVLENALKNHSKSQQIFQILA-TRKNPLKQDMVQ------DFIKLHWDSFQ 120 Query: 117 KIVKFINDSCSQAHILGLVISN--TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 I F DS G ++ + + + K L + + V + +V L Sbjct: 121 IIKGFFKDSLMAIGFFGEILYAWFSSLLQPKNIRLKATLYCIQESL----VKAIGIVALA 176 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 F+ G VIA QG+ QL QFGA I +++ S+L LRE+ ++TA++IAGRS SA AEIG Sbjct: 177 CFLIGIVIAYQGSIQLGQFGASILIVEMSSMLTLREMAPIITAIIIAGRSASAFSAEIGM 236 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 M+ +EIDA+R MG D + L+ PR+ AL + LPL+ +A+ ++GA +V I Sbjct: 237 MRATQEIDAMRVMGFDPITFLVLPRMLALCLVLPLVVFIADLFGLLGAMLVCQLQLGIGT 296 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F RF + + + G+ KAPF I V GF V + S+G T VV+SI Sbjct: 297 EQFVERFLQVVDMRHFWVGIAKAPFFGLIISFVGCFHGFIVAKDTRSIGVHTTKSVVESI 356 Query: 355 SIVIIIDSLFAIFYFAIG 372 +VI D+L ++ + +G Sbjct: 357 FLVIAFDALCSVVFTEMG 374 >gi|187927276|ref|YP_001897763.1| hypothetical protein Rpic_0168 [Ralstonia pickettii 12J] gi|309780024|ref|ZP_07674777.1| competence protein ComM [Ralstonia sp. 5_7_47FAA] gi|187724166|gb|ACD25331.1| protein of unknown function DUF140 [Ralstonia pickettii 12J] gi|308921194|gb|EFP66838.1| competence protein ComM [Ralstonia sp. 5_7_47FAA] Length = 374 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 104/376 (27%), Positives = 189/376 (50%), Gaps = 22/376 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVD------LSAITEIDTIGAEL 57 +G +V +G+W + ++E A + + Q A +D L+ + ID GA+L Sbjct: 15 DGRSVAFLSGDWTTLALAERA-----GVRSARQQIRAGLDNANAWCLTEVGRIDHFGAQL 69 Query: 58 IMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 + + G + + +Q ++ + K + + N L G+ Sbjct: 70 LW----RAWGNQWPEHLDARPDQR-RMLDRVAKLDPGGWKQRLAPRMNPVAIL----GEG 120 Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 ++ F + + + ++G ++ + G F + ++ G + +Y G + + L+ F+ Sbjct: 121 MLDFFDHAGNGIAMVGQLVFDLGRFVRAPHR--GPWREISANIYSTGYKALGITALVGFL 178 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V++ A QL FGA IF ++++ + +RE+G +L A+++AGRSGSAI A+IG M++ Sbjct: 179 IGIVLSYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRV 238 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EE+DA+R MG+ LI P++ AL I++PLL + A+ G + DI F Sbjct: 239 TEELDAMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYF 298 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + +AN++ G+ K I +VA G + ++ SLG+ TT VV SI+IV Sbjct: 299 ITSLPDAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIV 358 Query: 358 IIIDSLFAIFYFAIGI 373 I+ D++FAI + +GI Sbjct: 359 ILADAVFAILFKDVGI 374 >gi|145589257|ref|YP_001155854.1| hypothetical protein Pnuc_1074 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047663|gb|ABP34290.1| protein of unknown function DUF140 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 393 Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 110/379 (29%), Positives = 181/379 (47%), Gaps = 27/379 (7%) Query: 4 NGI-TVFRFAGNWKSPEISEIADDVVMAINKSIQS--DSAIVDLSAITEIDTIGAELIMY 60 NG+ V+ G W A D + + ++ S S D++ + +D G I+ Sbjct: 31 NGVVNVYTLGGVWTQ---VRAAQDAWLHSSSTVNSAAKSLTCDVTKVETLDGAGIAFIIA 87 Query: 61 FMEKYH---GKIKLQGVSTHIEQL---FSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI 114 E G +L G++ + L F IS + KPQR F N I Sbjct: 88 LQEAQTVAGGNFELIGLAERYQPLLKEFDPISNLFPAPVA--KPQRGFVTN--------I 137 Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLL-SLIRQMYYVGVSGVPVVIL 173 G I DS LG + S + S K + G++ +P++ L Sbjct: 138 GMGTANLIKDSKGLITFLGHLGS---DLVWSVRNLKHVRWGDFVNAAVEAGINALPIIGL 194 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 ++F+ G +++ Q A + QFGA F L ++ +RE+G L+TA+++AGRS +A AEIG Sbjct: 195 VAFLIGVILSFQAAIGMKQFGAVSFVGPLAALGIVREMGPLITAILLAGRSSAAFAAEIG 254 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 +M +N E+DA+ + GL +R L+ PR+ A I+ P+LT+ A+ +I AS++ Y IP Sbjct: 255 TMTVNSEVDALVSGGLSPMRFLVVPRVLAGILVAPILTLFADIVSIF-ASMLTMLIYGIP 313 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 F F++ S + ++ +GLIKA + V G G + ++G T VV S Sbjct: 314 FINFYNGMLSAVDVEDVTSGLIKATLFGVVVSAVGCLRGMQTGNGAAAVGISATRAVVSS 373 Query: 354 ISIVIIIDSLFAIFYFAIG 372 I +++I+D +FA + G Sbjct: 374 IVMIVIVDGIFAFISYKTG 392 >gi|323524591|ref|YP_004226744.1| hypothetical protein BC1001_0219 [Burkholderia sp. CCGE1001] gi|323381593|gb|ADX53684.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1001] Length = 389 Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 78/215 (36%), Positives = 128/215 (59%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 +Y G +P+ L++F+ G V++ A QL FGA + ++++ + +RE+G +L+A+ Sbjct: 174 NVYNAGTKALPITALVAFLIGIVLSYLSAQQLRLFGANQYIVNILGLSVIRELGPVLSAI 233 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++AGRSGSAI A+IG M++ EE+DA+R MG+ LI PR+ AL +++PLL + N A Sbjct: 234 LVAGRSGSAITAQIGVMRVTEELDAMRVMGIPHGLRLILPRVVALGVAMPLLVMWTNIIA 293 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 + G ++ I + F +AN++ GL K I IV GF + + Sbjct: 294 LTGGALAAKIVLGIDMSYFARALPGVVPVANLWIGLGKGVAFGMLIAIVGCHFGFRIKAN 353 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 S SLG+ T+ VV SI+IVI+ D++FAI + +G+ Sbjct: 354 SQSLGEGTTSSVVTSITIVILADAVFAILFQNVGL 388 >gi|298530599|ref|ZP_07018001.1| protein of unknown function DUF140 [Desulfonatronospira thiodismutans ASO3-1] gi|298509973|gb|EFI33877.1| protein of unknown function DUF140 [Desulfonatronospira thiodismutans ASO3-1] Length = 379 Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 97/342 (28%), Positives = 177/342 (51%), Gaps = 27/342 (7%) Query: 41 IVDLSAITEIDTIGAELIMYF---MEKYHGKIKLQGVSTHIEQLFSLIS-FTHRKKIKNQ 96 ++D+ + +D G L+++F M+ + ++++G+ + ++ I F R + + Sbjct: 56 VLDVEKVDYMDMSGQALLLHFSRQMQDRNLSVEVRGLRPELREIQEEIDCFDCRPRPMQR 115 Query: 97 KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCAS---SYKFKGFL 153 K ++ + L G+ V D+ S GEF +S S G + Sbjct: 116 K------LSALEEL----GRAAVNLGRDTRQ-------FFSFVGEFVSSFAYSLTHPGTV 158 Query: 154 L--SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211 ++ M VG V ++ L+ F+ G +IA Q A L FGAEIF L+ + +RE+ Sbjct: 159 RWKDVLSHMEAVGGRAVFIIALMGFLIGVIIAFQTAITLRAFGAEIFVAKLLGLSIVREL 218 Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271 G L+T++++AGRSGSA AEIG+MK NEEI+A++TMGL VR L+ PR+ A ++ PLL Sbjct: 219 GPLVTSIILAGRSGSAFAAEIGTMKTNEEINALQTMGLSPVRFLVVPRMLAAMLVTPLLC 278 Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 I + IG ++V+ D + + ++ + + ++K + + + Sbjct: 279 IFFLLFSFIGGALVMLS-MDFTLTTYIHQLKTSVGMTDFLGSMVKVFVFSILVAWIGCVR 337 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 G G ++++G+ T+ VV +I ++I+ D +FA+ Y+ +GI Sbjct: 338 GLQTGSGASAVGRSTTSAVVSAIVLIILADGIFAVVYYMLGI 379 >gi|91776717|ref|YP_546473.1| hypothetical protein Mfla_2365 [Methylobacillus flagellatus KT] gi|91710704|gb|ABE50632.1| protein of unknown function DUF140 [Methylobacillus flagellatus KT] Length = 373 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 99/365 (27%), Positives = 178/365 (48%), Gaps = 17/365 (4%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72 G W + ++ A+ + A DL+ + ++DT GA ++ + GK++ + Sbjct: 22 GQWSLRALDNDFAELRRALKPYFSDEKAQWDLTQVEQLDTAGAAVLW---NGWQGKMEGR 78 Query: 73 GVSTHIEQ--LFSLISFTHRKKIKNQKPQRSFF--YNSFKNLHYHIGKKIVKFINDSCSQ 128 V+ EQ LF ++ + + P+ + F L I +V F+ Sbjct: 79 -VTLTDEQVALFDTLASIETTTVAEKPPRFDWLKLVAGFGKLTIFISSHVVDFVKLIGLL 137 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG ++ +F + +Y GV+ +PV L+ F+ G ++ A Sbjct: 138 VLELGYLLRRPQDFPWREFS---------ANIYKSGVTALPVTALLGFMIGIAMSYLMAT 188 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 QL FGA+IF ++++ + +RE+G +L AV++AGRSGS++ A+IG M++ EEIDA+ TMG Sbjct: 189 QLRTFGADIFIVNILGLAVIRELGPILMAVLVAGRSGSSMAAQIGVMRVTEEIDALATMG 248 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + + ++ P++ L + P L I + A++G ++ + F FF + Sbjct: 249 ISRILRVVLPKVLGLTVIAPFLVIWTSCWALLGGALSANIELGLGFRFFFDYLAAVVQPV 308 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 NI GLIK + ++A G + ++ SL + T+ VV +I+ VI+ID+ FAI Sbjct: 309 NITLGLIKGVMFGFIVAVMACHFGLRIKPNTESLSRSTTSSVVTAITCVILIDAAFAIIT 368 Query: 369 FAIGI 373 IG+ Sbjct: 369 SGIGV 373 >gi|241767246|ref|ZP_04764987.1| protein of unknown function DUF140 [Acidovorax delafieldii 2AN] gi|241362094|gb|EER58209.1| protein of unknown function DUF140 [Acidovorax delafieldii 2AN] Length = 373 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 96/365 (26%), Positives = 188/365 (51%), Gaps = 18/365 (4%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIV---DLSAITEIDTIGAELIM-YFMEKYHGK 68 G W + E+ + + A++ ++ ++A DL + +D +GA+L+ ++ + + G+ Sbjct: 23 GRWGAAELGQRSQ--WRALSAQLRDNTAPAGGWDLRGLDWLDHVGAQLLWDHWGQAWPGR 80 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 ++L L + +FT +P R + H+G ++ ++ + Sbjct: 81 LEL--TDPQRAMLERVGAFT--APPPPAEPWR------LADQADHLGVLVLHGLDHARHV 130 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 ++G + + + ++ +S +Y +G + +P+ L+ F+ G V+A + Sbjct: 131 VQLIGQLALDLLRLVRAPHRAPWRDMS--GHVYRMGATALPITALVGFLIGVVLAYLMSL 188 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 QL Q+GAE F ++++ I +RE+G +L A+++AGRSGS+I A+IG M++ EE+DA+R MG Sbjct: 189 QLRQYGAESFIVNILGISLIRELGPMLAAILVAGRSGSSITAQIGVMRVTEELDAMRVMG 248 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + L+ PR AL +++PL+++ +A+ G + I A F + + Sbjct: 249 IPHGFRLVMPRTLALALAMPLISVWTTLAALAGGMLAADVSMGISPAYFVEALPAAVKIG 308 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 N+ K+ I ++ G V ++ SLG+ T VV SI++VII+D+LFA+ + Sbjct: 309 NLGLATAKSVVFGALIALIGCHWGLRVKPNTQSLGEGTTASVVTSITMVIIVDALFAVAF 368 Query: 369 FAIGI 373 IGI Sbjct: 369 KNIGI 373 >gi|329905881|ref|ZP_08274264.1| ABC-type transport system [Oxalobacteraceae bacterium IMCC9480] gi|327547452|gb|EGF32273.1| ABC-type transport system [Oxalobacteraceae bacterium IMCC9480] Length = 372 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 105/378 (27%), Positives = 186/378 (49%), Gaps = 33/378 (8%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIV--------DLSAITEIDTIGAEL 57 ++V +G W ++ +AD V+ Q D+A+ DL+ IT ID IGA+ Sbjct: 16 LSVIVASGAW---QVHALADAGVIG-----QLDAALARLTKPTGWDLTQITAIDHIGAQ- 66 Query: 58 IMYFMEKYHGKIKLQGV--STHIEQLFSLISFTHRKKIKN-QKPQRSFFYNSFKNLHYHI 114 ++ GK + G+ S ++ F + + QKP+ +K L + Sbjct: 67 ---WLWNVWGKTRPPGLVLSDRQDEFFQRLEQAGPLTLPEVQKPR-------WKQL-IRL 115 Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 G + +LG ++ + F + + G + +Y G + + L+ Sbjct: 116 GARTQSLTGHLIDVVGLLGQLMFDLRRFALNPRR--GPWKEISSNIYRTGYQALGITALV 173 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 + G V++ A QL FG +I+ ++++ + +RE+G LL A+++AGRSGS+I A++G Sbjct: 174 GMLIGVVLSYLSAQQLHSFGGDIYLVNILGMSIIRELGPLLAAILVAGRSGSSITAQLGV 233 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 M++NEE+DA+ MGL LI P++ AL I++PLL I + A++G + + Sbjct: 234 MRVNEELDAMLVMGLPHGFRLIMPKVLALAIAMPLLVIWTDAMALLGGMVAANLELGLSP 293 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F + LAN + G+ K I +VA GF + ++ SLG T+ VV +I Sbjct: 294 RYFLHKLPDAVPLANYWIGIGKGVVFGGLIALVACHFGFRIKANTESLGAGTTSSVVTAI 353 Query: 355 SIVIIIDSLFAIFYFAIG 372 ++VI+ D++FAI + +G Sbjct: 354 TVVILADAVFAIVFSGVG 371 >gi|257092687|ref|YP_003166328.1| hypothetical protein CAP2UW1_1065 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045211|gb|ACV34399.1| protein of unknown function DUF140 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 370 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 99/344 (28%), Positives = 173/344 (50%), Gaps = 18/344 (5%) Query: 33 KSIQSDSAIVDLSAITEIDTIGAELIMY-FMEKYHGKIKLQGVSTHIEQLFSLISFTHRK 91 + + S A DL +I +D+ A ++ + ++ + L G + + Sbjct: 40 RELASREAAWDLLSIARLDSAAAVVLWRSWGRRWPASLALSGEHRLL--------LERVE 91 Query: 92 KIKNQKPQRSFFYNSFKNLHYHI--GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKF 149 I P R + L + + G+ + +++ ++G ++ + G CA Sbjct: 92 AIPADLPARPS-----ERLGWLLVPGRLALAAVDNLAGMVALVGQMVLDVGHLCAHPRDI 146 Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209 S +Y G +PV LI F+ G V++ A QL FGA++F ++L+ I +R Sbjct: 147 PWREFS--ANLYKSGAQALPVTALIGFLIGIVLSYLSALQLKTFGADVFIVNLLGISIVR 204 Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 E+G +L AV++AGRSGSA+ A++G M++ EEIDA+ TMG+ L+ P+I AL +++PL Sbjct: 205 ELGPVLVAVLVAGRSGSAMTAQLGVMRVTEEIDALATMGVSRSLRLVLPKIIALAVAMPL 264 Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329 L + + + I+G I D+ + F +AN++ G+ K IG+VA Sbjct: 265 LVVWCSAAGIVGGMIAARLQMDLSYGFFIDTLPRVVPVANLWIGMSKGLVFGMLIGLVAC 324 Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 G V ++ SL + TT VV SI++ I++D++FAI + GI Sbjct: 325 HFGLRVKPNTESLSSQTTTSVVTSITVAILVDAVFAIMTRSFGI 368 >gi|254480123|ref|ZP_05093371.1| conserved domain protein [marine gamma proteobacterium HTCC2148] gi|214039685|gb|EEB80344.1| conserved domain protein [marine gamma proteobacterium HTCC2148] Length = 376 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 81/213 (38%), Positives = 127/213 (59%), Gaps = 1/213 (0%) Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 Y G ++ L S + G ++A GA QL QFGAE++ DL+ I LRE+GVL+ A+++ Sbjct: 165 YQAGPDAFAIISLTSVLVGMILAYLGAVQLQQFGAEVYVADLVVIGMLREMGVLMAAIVM 224 Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280 AGR+G+A A++G+M+ NEEIDAIRTMG+ + L+ PR+ AL++++PLLT+ AN II Sbjct: 225 AGRTGAAYAAQLGTMQANEEIDAIRTMGISPMEFLVVPRMLALVVAMPLLTLYANLLGII 284 Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 G IV P ++ S + L+++ GLIK+ I + + G G S Sbjct: 285 GGGIVSGGLGVTPL-MYISEGETALQLSHLSVGLIKSVVFGVLIAVAGCRSGINSGRSSA 343 Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 ++G+ T VV +I +I+ D+ I + +GI Sbjct: 344 AVGQAATQAVVTAIVYLIVADAAINILFQQVGI 376 >gi|107023833|ref|YP_622160.1| hypothetical protein Bcen_2286 [Burkholderia cenocepacia AU 1054] gi|105894022|gb|ABF77187.1| protein of unknown function DUF140 [Burkholderia cenocepacia AU 1054] Length = 425 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 108/380 (28%), Positives = 181/380 (47%), Gaps = 65/380 (17%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 R G W + ++ V I + DLS I +D +G + + + G+ Sbjct: 94 RLTGQWTALSLARNRGAVARRIASIAAGRVSEWDLSGIERLDHVGGQALW----RVWGRK 149 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 GV+ Q ++ R + + P+R IV+F D ++ Sbjct: 150 LPAGVALSATQ-RTIFERIERLDSEREAPER-----------------IVRF--DPVTR- 188 Query: 130 HILGLVISNTGEFCASSYKFKGFL----LSLIRQ------------MYYVGVSGVPVVIL 173 LGL I GE G + LS++R+ +Y G +P+ L Sbjct: 189 --LGLAIFAFGEHLQGGITMFGRVILDALSVLRRPKTMPWKETSANIYSAGAQALPITAL 246 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 ++F+ G V++ A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG Sbjct: 247 VAFLIGIVLSYLSAQQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIG 306 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 M++ EE+DA+R MG+ LI PR+ AL +++PLL + N A+ G +P Sbjct: 307 VMRVTEELDAMRVMGIPHGLRLILPRVLALGVAMPLLVMWTNIIALPGV---------VP 357 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 +AN++ G+ K I +VA GF + +S SLG+ TT VV S Sbjct: 358 -------------IANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSS 404 Query: 354 ISIVIIIDSLFAIFYFAIGI 373 I++VI+ D++FAI + +G+ Sbjct: 405 ITVVILADAVFAILFQNVGL 424 >gi|71906845|ref|YP_284432.1| hypothetical protein Daro_1206 [Dechloromonas aromatica RCB] gi|71846466|gb|AAZ45962.1| Protein of unknown function DUF140 [Dechloromonas aromatica RCB] Length = 368 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 93/333 (27%), Positives = 168/333 (50%), Gaps = 16/333 (4%) Query: 43 DLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF 102 DLSA+T +D+ A L+ + G+ S ++++ + ++ + P++ Sbjct: 47 DLSAVTRLDSAAAVLLW---RTWGGQWP---ASLDVDEMHRAV-LVRVAELPREMPEQVL 99 Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFL--LSLIRQM 160 +L IG + K + + + G ++ + CA ++ + + Sbjct: 100 ---PRVHLPEFIGVLLFKALANVRGMVALFGQLLLD----CAYLFRHPKDVPWREFTSNV 152 Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 Y G +PV L+ F+ G I+ A QL FGA++F ++++ I +RE+G +L AV++ Sbjct: 153 YKAGALALPVTALVGFLIGVTISYLSALQLKSFGADLFIVNILGISIIRELGPVLVAVLV 212 Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280 AGRSGSA+ A+IG M++ EEIDA+ TMG+ ++ P+++ L +++PLL + + A+ Sbjct: 213 AGRSGSAMTAQIGVMRVTEEIDALSTMGISRSIRVVLPKVFGLTVAMPLLVLWTSAVALF 272 Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 G + D+ F +AN+F GL K +VA G V ++ Sbjct: 273 GGMLAALMQLDLSLIYFLENLPRAVPVANLFIGLGKGLVFGFVTAVVACHFGLHVKPNTE 332 Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 SL T+ VV +I+ VI++D++FAIF IG+ Sbjct: 333 SLSANTTSAVVTAITSVILVDAIFAIFTRQIGV 365 >gi|258593363|emb|CBE69702.1| toluene transporter subunit: membrane component of ABC superfamily [NC10 bacterium 'Dutch sediment'] Length = 247 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 85/228 (37%), Positives = 135/228 (59%), Gaps = 4/228 (1%) Query: 143 CASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDL 202 CA + F LIRQ+ ++GV + + + + TG V+A Q A+ LS+FGA+ + + Sbjct: 18 CACTPPFNP--RELIRQVDHIGVKSISIAGVAAAFTGLVLALQTAYGLSRFGAKAYVGII 75 Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 +S+ +RE+G +LTA+++ GR GS I AE+GSMK+ E+IDA+R MG + V+ L+ PR+ + Sbjct: 76 VSLSMVRELGPVLTALLVGGRVGSGITAELGSMKVTEQIDAMRAMGANPVKKLVVPRVLS 135 Query: 263 LIISLPLLTILANFSAIIGASIVIWKY-YDIPFAVFFSRFHSTATLANIFTGLIKAPFMA 321 ++ LPLLT++A+ I+G +VI KY + + + +++ TLA+I +GL K Sbjct: 136 TMLVLPLLTVMADILGILGG-MVISKYEFQVDYHFYYNTVTRNLTLADIVSGLGKTVVFG 194 Query: 322 CAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 I IV +G A + LGK T VV S VII D F++ Sbjct: 195 FIIAIVGCYKGLATVGGTEGLGKATTATVVTSAIAVIISDFFLTKFFW 242 >gi|113866165|ref|YP_724654.1| putative uncharacterized transport protein [Ralstonia eutropha H16] gi|113524941|emb|CAJ91286.1| putative uncharacterized transport protein [Ralstonia eutropha H16] Length = 378 Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 97/338 (28%), Positives = 165/338 (48%), Gaps = 13/338 (3%) Query: 37 SDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ-GVSTHIEQLFSLISFTHRKKIKN 95 DSA L+ + +D IG +L+ + ++G + + S ++F I+ + K Sbjct: 53 PDSAQWSLAGVERLDHIGGQLLW---QAWNGALPQRLDASEGQRRVFERIAAVQNEGWKK 109 Query: 96 QKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLS 155 R +N G ++ F S +LG + + F + G Sbjct: 110 HMVDR---FNPIT----LFGANVLSFGAQLRSGITMLGQLAFDLLRFAGVPQR--GPWRE 160 Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 + +Y VG + + L+ F+ G V++ A QL FGA F ++++ + +RE+G +L Sbjct: 161 ISANIYNVGYKALGITALVGFLIGIVLSYLSANQLRTFGASTFIVNILGMAVIRELGPVL 220 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++IAGRSGSAI A+IG M++ EE+DA+R MG+ LI PR+ AL I++PLL + Sbjct: 221 AAILIAGRSGSAITAQIGVMRVTEELDAMRVMGISHGFRLIMPRVIALAIAMPLLVAWTD 280 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 A+ G + I F +AN++ GL K I + A G + Sbjct: 281 VMALAGGMLAARMQLGISATFFLRELPDAVPVANLWLGLGKGVVFGILIALTACHFGLRI 340 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 ++ SLG+ T VV +I+IVI+ D++FA+ + +G+ Sbjct: 341 KPNTQSLGEGTTASVVTAITIVILADAVFAVLFKDVGL 378 >gi|149907972|ref|ZP_01896640.1| membrane protein, putative [Moritella sp. PE36] gi|149808978|gb|EDM68909.1| membrane protein, putative [Moritella sp. PE36] Length = 262 Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 78/217 (35%), Positives = 128/217 (58%), Gaps = 5/217 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +I Q+Y++G + V+ + TG V+ QG + LS+FG+ +++ +RE+G +L Sbjct: 44 VIEQLYFIGAKSIIVICVTGLFTGMVLGLQGYYTLSKFGSTGLLGSAVALTLIRELGPVL 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA+MI GR+GSA+ AEIG M+I+E+IDA++TM +D +R L+SPRI A +IS PLLT + + Sbjct: 104 TAIMIIGRAGSAMTAEIGIMRISEQIDALKTMTIDPIRFLVSPRIIAALISFPLLTAIFD 163 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I G + + I A +F R S+ +A++ G IK+ F + + V G+ Sbjct: 164 TVGIFGGYLTGSQLLGINPATYFYRVESSVIMADVAGGFIKSIFFSITVITVCCYHGYYT 223 Query: 336 GVHSNSLGKK-----VTTCVVQSISIVIIIDSLFAIF 367 + ++ G K TT VVQ+ +V++ID + F Sbjct: 224 HIRRDNFGAKGVGLSTTTAVVQASILVLVIDYILTTF 260 >gi|89902676|ref|YP_525147.1| hypothetical protein Rfer_3917 [Rhodoferax ferrireducens T118] gi|89347413|gb|ABD71616.1| protein of unknown function DUF140 [Rhodoferax ferrireducens T118] Length = 376 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 74/224 (33%), Positives = 133/224 (59%) Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209 KG + ++ +G + +P+ L+ F+ G V+A + QL QFGA+ F ++++ + +R Sbjct: 153 KGPWRDVSGHLFSIGATALPITALLGFLIGVVLAYLMSLQLRQFGADSFIVNILGLSVIR 212 Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 E+G +L A++IAGRSGS I A+IG M++ EE+DA+R MG+ L+ PR A+ +++PL Sbjct: 213 ELGPVLAAILIAGRSGSTITAQIGVMRVTEELDAMRVMGIAKGYRLVLPRAIAMALAMPL 272 Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329 LT+ + +A++G + + A FF+ ++N+ + K+ I ++ Sbjct: 273 LTVWTSLAALLGGMLAADLTMGVTPAYFFAALPRAVEVSNLTLAMGKSVVFGLLIALIGC 332 Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 G V ++ SLG+ T VV SI++VI++D++FA+ + IGI Sbjct: 333 HYGLRVKPNTESLGQGTTASVVTSIAMVILVDAVFALVFKDIGI 376 >gi|160895814|ref|YP_001561396.1| hypothetical protein Daci_0365 [Delftia acidovorans SPH-1] gi|160361398|gb|ABX33011.1| protein of unknown function DUF140 [Delftia acidovorans SPH-1] Length = 376 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 96/364 (26%), Positives = 177/364 (48%), Gaps = 11/364 (3%) Query: 11 FAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 G+W + E+ A + A + D +L + +D +GA+L+ + G+ Sbjct: 23 LTGSWGAAELGRRAQWRKLRAQLADAKGDDLGWNLEGLDWLDHVGAQLLW----NHWGRR 78 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 ++ Q L K P R +L G ++ Sbjct: 79 LPARLAASDAQRAMLERVGRFSKEPAPPPPRLNLLERIDSL----GCLVINACGHFAQMT 134 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 ++G ++ + F + ++ G + +Y +G + +P+ L+ F+ G V+A A Q Sbjct: 135 RLIGQLLIDLLRFARAPHR--GPWRDISGHLYSMGATALPITALVGFLIGVVLAYLMALQ 192 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L QFGAE F ++++ I +RE+G LL A+++AGR+GSAI A+IG M++ EE+DA++ MG+ Sbjct: 193 LRQFGAESFIVNILGISLIRELGPLLAAILVAGRTGSAITAQIGVMRVTEELDAMQVMGI 252 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 L+ PR AL I++PL+++ +A+ G + + A F + + N Sbjct: 253 PHGFRLVLPRALALAIAMPLVSLWTTLAALAGGMLAADLTMGVTGAYFAEALPAAVKIGN 312 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 ++ + K+ I ++ G V ++ SLGK T VV +I++VI++D++FAI + Sbjct: 313 LWIAMGKSVVFGALIALIGCHWGLRVEPNTQSLGKGTTASVVTAITMVIVVDAIFAILFK 372 Query: 370 AIGI 373 +GI Sbjct: 373 DVGI 376 >gi|83748501|ref|ZP_00945522.1| ABC transporter permease protein [Ralstonia solanacearum UW551] gi|207742154|ref|YP_002258546.1| abc-type transport system involved in resistance to organic solvents, permease component protein [Ralstonia solanacearum IPO1609] gi|83724805|gb|EAP71962.1| ABC transporter permease protein [Ralstonia solanacearum UW551] gi|206593542|emb|CAQ60469.1| abc-type transport system involved in resistance to organic solvents, permease component protein [Ralstonia solanacearum IPO1609] Length = 374 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 105/373 (28%), Positives = 186/373 (49%), Gaps = 16/373 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITE---IDTIGAELIMY 60 +G +V +G+W + ++E A V + + I++ + +TE ID GA+L+ Sbjct: 15 DGRSVAYLSGDWTTLALAERAG--VRSARRQIRAGLDNANAWCLTEVGRIDHFGAQLLW- 71 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 + G + + +Q +I R K + + N L G ++ Sbjct: 72 ---RAWGNRWPEHLDARADQ-RRMIDRVARLDPGGWKKRIAPRINPVTVL----GGAMID 123 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 F + ++G ++ + F + ++ G + +Y G + + L+ F+ G Sbjct: 124 FADHLRIGVAMVGQLMFDLLRFVRAPHR--GPWREISANIYSTGYKALGITALVGFLIGI 181 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V++ A QL FGA IF ++++ + +RE+G +L A+++AGRSGSAI A+IG M++ EE Sbjct: 182 VLSYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEE 241 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +DA+R MG+ LI P++ AL I++PLL + A+ G + DI F + Sbjct: 242 LDAMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITS 301 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 +AN++ G+ K I +VA G + ++ SLG+ TT VV SI+IVI+ Sbjct: 302 LPDAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIVILA 361 Query: 361 DSLFAIFYFAIGI 373 D++FAI + +GI Sbjct: 362 DAVFAILFKDVGI 374 >gi|188590871|ref|YP_001795471.1| hypothetical protein RALTA_A0076 [Cupriavidus taiwanensis LMG 19424] gi|170937765|emb|CAP62749.1| conserved hypothetical protein, DUF140; putative TRANSMEMBRANE PROTEIN [Cupriavidus taiwanensis LMG 19424] Length = 376 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 105/380 (27%), Positives = 185/380 (48%), Gaps = 28/380 (7%) Query: 4 NGITVFRFAGNWKSPEISEI--ADDVVMAINKSIQS-DSAIVDLSAITEIDTIGAELIMY 60 +G + G+W + ++ A + +++ Q+ D A L+ + +D IG +L+ Sbjct: 15 DGTVSVQLRGDWTALALAGCHQARQLRAQLHELAQAPDHAQWSLAGVERLDHIGGQLLW- 73 Query: 61 FMEKYHGKI--KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + ++G + +L+ S ++F+ I+ + K R +N L G + Sbjct: 74 --QAWNGALPQRLE-ASEGQRRVFARIAAVQDEGWKKHMVDR---FNPVTLL----GANV 123 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKF-----KGFLLSLIRQMYYVGVSGVPVVIL 173 + F LG I+ G+ +F +G + +Y VG + + L Sbjct: 124 MSF-------GVQLGNGITMLGQLAFDLLRFARMPQRGPWREISANIYNVGYKALGITAL 176 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 + F+ G V++ A QL FGA F ++++ + +RE+G +L A++IAGRSGSAI A+IG Sbjct: 177 VGFLIGIVLSYLSANQLRTFGASTFIVNILGMAVIRELGPVLAAILIAGRSGSAITAQIG 236 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 M++ EE+DA+R MG+ LI PR+ AL I++PLL + A+ G + I Sbjct: 237 VMRVTEELDAMRVMGISHGFRLIMPRVIALAIAMPLLVAWTDVMALAGGMLAARMQLGIS 296 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 F +AN++ GL K I + A G + ++ SLG+ T VV + Sbjct: 297 ATFFLRELPDAVPVANLWLGLGKGVVFGILIALTACHFGLRIKPNTQSLGEGTTASVVTA 356 Query: 354 ISIVIIIDSLFAIFYFAIGI 373 I+IVI+ D++FAI + +G+ Sbjct: 357 ITIVILADAVFAILFKDVGL 376 >gi|242310202|ref|ZP_04809357.1| ABC transporter [Helicobacter pullorum MIT 98-5489] gi|239523499|gb|EEQ63365.1| ABC transporter [Helicobacter pullorum MIT 98-5489] Length = 365 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 100/292 (34%), Positives = 155/292 (53%), Gaps = 15/292 (5%) Query: 94 KNQKPQRSFFYNSFKNL--HYHIGKKIVKFINDSC----SQAHILGLVISNTGE----FC 143 +N K Q+ F S K + + ++ + I+K +DS + L L + GE F Sbjct: 75 QNPKSQKIFKILSTKEIPSNTNLTQNIIKIHSDSFIIIKNNIKTLILSLGFLGEILYTFL 134 Query: 144 ASSYKFKGFLLSLIRQMYYVG---VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSI 200 AS FK + L Y++ + V +V L F+ G VIA QG+ QL QFGA I + Sbjct: 135 ASFINFKS--IRLKATFYFIQESLIKAVGIVALACFLIGIVIAYQGSIQLRQFGASILIV 192 Query: 201 DLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRI 260 ++ S+L LRE+ ++TA++IAGRS SA AEIG M+ +EIDA+R MG + + L+ PR+ Sbjct: 193 EMSSMLTLREMAPIITAIIIAGRSASAFSAEIGMMRATQEIDAMRVMGFNPMTFLVVPRM 252 Query: 261 WALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320 AL LPL+ +A+ ++G+ V DI F RF + + + G+ KAPF Sbjct: 253 LALCCVLPLVVFIADLFGLVGSMFVCQIQLDISTEQFLERFLQMVDMRHFWVGIAKAPFF 312 Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 I + GF+V + S+G T VV+SI VI D++ ++ + +G Sbjct: 313 GLIISFIGCFHGFSVAKDTRSIGVHTTKSVVESIFFVIAFDAICSVIFTEMG 364 >gi|299068161|emb|CBJ39380.1| putative abc-type transport system, permease component abc transporter protein (resistance to organic solvents) [Ralstonia solanacearum CMR15] Length = 374 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 104/377 (27%), Positives = 188/377 (49%), Gaps = 24/377 (6%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITE---IDTIGAELIMY 60 +G +V +G+W + ++E A V + + I++ + +TE ID GA+L+ Sbjct: 15 DGRSVAYLSGDWTTLALAERAG--VRSARRQIRTGLNTANAWCLTEVGRIDHFGAQLLWR 72 Query: 61 -FMEKYHGKIKLQGVSTH-IEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNL--HYHIGK 116 + ++ + + I+++ L +K+I + + N+ + H IG Sbjct: 73 AWGNRWPELLDARPDQRRMIDRVARLDPGGWKKRIAPRINPVAVLGNAMLDFAEHLRIGV 132 Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 +V G ++ + F + ++ G + +Y G + + L+ F Sbjct: 133 AMV-------------GQLVFDLLRFVRAPHR--GPWREISANIYSTGYKALGITALVGF 177 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 + G V++ A QL FGA IF ++++ + +RE+G +L A+++AGRSGSAI A+IG M+ Sbjct: 178 LIGIVLSYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMR 237 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 + EE+DA+R MG+ LI P++ AL I++PLL + A+ G + DI Sbjct: 238 VTEELDAMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTY 297 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 F + +AN++ G+ K I + A G + ++ SLG+ TT VV SI+I Sbjct: 298 FITSLPDAVPVANLWLGIGKGVVFGMLIALAACHFGLRIQPNTQSLGEGTTTSVVVSITI 357 Query: 357 VIIIDSLFAIFYFAIGI 373 VI+ D++FAI + +GI Sbjct: 358 VILADAVFAILFKDVGI 374 >gi|197120798|ref|YP_002132749.1| hypothetical protein AnaeK_0378 [Anaeromyxobacter sp. K] gi|196170647|gb|ACG71620.1| protein of unknown function DUF140 [Anaeromyxobacter sp. K] Length = 370 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 100/341 (29%), Positives = 165/341 (48%), Gaps = 24/341 (7%) Query: 41 IVDLSAITEIDTIGAELIMYF---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97 ++D S + +DT GA L+ +E+ + L H E L +L++ + + + Sbjct: 46 VIDASGVAAMDTAGAWLLRRAARDLERGGRPVTLTLRPEH-EALLALVTSSGEVAPRRAR 104 Query: 98 PQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFK-GFLLSL 156 + F +G+ + S A +G V++ GE + + G L Sbjct: 105 ERARFLSE--------LGRS-------AWSSALAIGGVLTLVGELAGRVARARAGPLRVR 149 Query: 157 IRQ----MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 RQ + G +P L+SF G V+A QGA L FGA I DL+ + LRE+ Sbjct: 150 ARQAVLHVQSAGFEALPTTALLSFFVGVVLASQGATLLRPFGAGILIADLVGLAMLRELS 209 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 L+TA+++AGRSGSA A+IG+MK+ EI+++R G+ V L+ PRI AL + +PLLT+ Sbjct: 210 PLVTAIVVAGRSGSAYAAQIGAMKMAGEIESLRAGGVSPVDALVVPRIAALALVVPLLTV 269 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 A+ + GA++V + F R ++ G+ KAP + V +G Sbjct: 270 AADVLGLAGATLVARAELGMHAPEFLGRVAREVHASSYLLGVAKAPVFGVIVAAVGCHQG 329 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + S+G++ T VVQS+ +V++ D L + +GI Sbjct: 330 LRASDDAGSVGRRTTGAVVQSMFLVVLADGLVLVVSRQLGI 370 >gi|28898136|ref|NP_797741.1| putative ABC transport system permease [Vibrio parahaemolyticus RIMD 2210633] gi|153836560|ref|ZP_01989227.1| ABC-type transport system, permease component [Vibrio parahaemolyticus AQ3810] gi|260366435|ref|ZP_05778874.1| ABC transporter, permease protein [Vibrio parahaemolyticus K5030] gi|260878481|ref|ZP_05890836.1| ABC-type transport system, permease protein [Vibrio parahaemolyticus AN-5034] gi|260897062|ref|ZP_05905558.1| ABC transporter, permease protein [Vibrio parahaemolyticus Peru-466] gi|260901858|ref|ZP_05910253.1| ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037] gi|28806350|dbj|BAC59625.1| putative ABC transport system permease protein [Vibrio parahaemolyticus RIMD 2210633] gi|149750158|gb|EDM60903.1| ABC-type transport system, permease component [Vibrio parahaemolyticus AQ3810] gi|308087695|gb|EFO37390.1| ABC transporter, permease protein [Vibrio parahaemolyticus Peru-466] gi|308091102|gb|EFO40797.1| ABC-type transport system, permease protein [Vibrio parahaemolyticus AN-5034] gi|308108149|gb|EFO45689.1| ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037] gi|308113110|gb|EFO50650.1| ABC transporter, permease protein [Vibrio parahaemolyticus K5030] Length = 357 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 104/356 (29%), Positives = 188/356 (52%), Gaps = 28/356 (7%) Query: 19 EISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH---GKIKLQGVS 75 ++ E A+D++ +S +V+ S +T +D G + ++ +I + G+S Sbjct: 21 DLWEKANDIL----ESYPDSPIVVNASNLTFVDISGVAFLSDLQTRFRPPGAEISIIGLS 76 Query: 76 THIEQLFSLISFTHRKKIKNQKPQRSFFY---NSFKNLHYHIGKKIVKFINDSCSQAHIL 132 + +L + + +I + + FF N+ + + ++G +V+FI + C L Sbjct: 77 ASLAELVPPSNIENAPQIP--RGEDGFFERVGNATREMLVYVGS-VVRFIKE-CVLVFKL 132 Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQM-YYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 G+ + K + + + G VP+++LI F+ G +IA + Sbjct: 133 GI------------NRRKNVNWTTVSNIATRAGADAVPIILLIGFLMGVIIAFEIGLVAQ 180 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 QFGA +F D + I RE+G L+TA++ AGR+G+A AEIG+ K+NEEI+A+ T G+ Sbjct: 181 QFGAVLFVADGIGISMFRELGPLMTAIVFAGRTGAAFAAEIGTQKVNEEINALHTFGICP 240 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PRI+A ++ LPLLT+LA+ ++G ++V+ K +DI F ++ + + ++ ++F Sbjct: 241 VEFLVIPRIYASVLVLPLLTVLADIIGVLGGALVLLK-FDISFVQYYHQLLNALSVWDLF 299 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 GLIKA I ++ + G A G S S+G T+ VV SI +++ID F + Sbjct: 300 FGLIKATTFGFIIAVIGCERGLATGQGSTSVGLAATSAVVSSIIWIVVIDGFFTVL 355 >gi|254441414|ref|ZP_05054907.1| conserved domain protein [Octadecabacter antarcticus 307] gi|198251492|gb|EDY75807.1| conserved domain protein [Octadecabacter antarcticus 307] Length = 551 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 70/160 (43%), Positives = 105/160 (65%), Gaps = 2/160 (1%) Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 GL +S +F+ L +L+ VG+ VP+V L++F+ G V+A QG+ QL Q Sbjct: 44 GLFLSRLARSIRHPKEFR--LTALVHHCQEVGLKAVPIVALMAFLIGVVLAFQGSTQLKQ 101 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 FGAE+F +DL+++ LRE+G+LLT++++AGR+ SA A IGSMK+ EEIDA+R++GLD Sbjct: 102 FGAEVFVVDLIAVYILRELGILLTSIIVAGRTASAFTAAIGSMKMREEIDAMRSLGLDPA 161 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 IL PRI AL++ LP+L ++AN + G + DI Sbjct: 162 TILFVPRILALVLMLPILGLVANVMGLFGDPMAAQVPVDI 201 >gi|300705335|ref|YP_003746938.1| ABC transporter permease [Ralstonia solanacearum CFBP2957] gi|299072999|emb|CBJ44356.1| putative abc-type transport system, permease component abc transporter protein (resistance to organic solvents) [Ralstonia solanacearum CFBP2957] Length = 374 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 105/373 (28%), Positives = 184/373 (49%), Gaps = 16/373 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITE---IDTIGAELIMY 60 +G +V +G+W + ++E A V + I++ + +TE ID GA+L+ Sbjct: 15 DGRSVAYLSGDWTTLALAERAG--VRGARRQIRAGLDNANAWCLTEVGRIDHFGAQLLW- 71 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 + G + + +Q +I R K + N L G ++ Sbjct: 72 ---RAWGNRWPEHLDARADQ-RRMIDRVARLDPGGWKKHIAPRINPVTVL----GGAMLD 123 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 F + ++G ++ + F + ++ G + +Y G + + L+ F+ G Sbjct: 124 FADHLQIGVAMVGQLMFDLLRFVRAPHR--GPWREISANIYSTGYKALGITALVGFLIGI 181 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V++ A QL FGA IF ++++ + +RE+G +L A+++AGRSGSAI A+IG M++ EE Sbjct: 182 VLSYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEE 241 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +DA+R MG+ LI P++ AL I++PLL + A+ G + DI F + Sbjct: 242 LDAMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITS 301 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 +AN++ G+ K I +VA G + ++ SLG+ TT VV SI+IVI+ Sbjct: 302 LPDAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIVILA 361 Query: 361 DSLFAIFYFAIGI 373 D++FAI + +GI Sbjct: 362 DAVFAILFKDVGI 374 >gi|298530716|ref|ZP_07018118.1| protein of unknown function DUF140 [Desulfonatronospira thiodismutans ASO3-1] gi|298510090|gb|EFI33994.1| protein of unknown function DUF140 [Desulfonatronospira thiodismutans ASO3-1] Length = 256 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 124/212 (58%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +QM ++GV+ + VV L S TG V+A Q + S FGAE +++ RE+G ++T Sbjct: 45 KQMEFIGVNSLFVVALTSLFTGMVLALQTFYAFSMFGAETLVGATVALSMTRELGPVITG 104 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +M+ GR+GSAI AEIG+M++ E++DA+ M ++ V+ L+ PRI A +I LPLLTI++N Sbjct: 105 LMVTGRAGSAICAEIGTMRVTEQVDALTVMAINPVQYLVLPRIVAGVIMLPLLTIISNTM 164 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 I+G +V + DI +F ++ T+A+++ GLIKA + +V +GF Sbjct: 165 GILGGYLVGVQLLDIHGGMFLNKIQEHVTMADVYNGLIKASAFGGILTLVGCYKGFYTRG 224 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+ T VV S ++++ D F Sbjct: 225 GAEGVGRSTTQAVVMSSVLILVSDYFLTALMF 256 >gi|239907930|ref|YP_002954671.1| putative ABC transporter permease protein [Desulfovibrio magneticus RS-1] gi|239797796|dbj|BAH76785.1| putative ABC transporter permease protein [Desulfovibrio magneticus RS-1] Length = 384 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 95/379 (25%), Positives = 179/379 (47%), Gaps = 18/379 (4%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTI---GAEL 57 ++ G+ F+G+W+ + + V A+ S ++ +T D++ Sbjct: 18 VASGGVVTLTFSGSWRMDQTLPDIEAVRQALAASPAPQKLVLAGEGVTGWDSLFLTQCRA 77 Query: 58 IMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIG-- 115 I+ + + + +E L +L + ++ + +R+ F ++ Y Sbjct: 78 IIALARERGVAVDAGALPPGVESLLALAAKVPERQGAARAAKRTPFLERMADMGYGAAQG 137 Query: 116 -KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 + ++ F D A L ++ F S L +LI Y + + +V LI Sbjct: 138 VRNLLDFTGDVTLAAWAL---VTGRAVFQRSQ------LTTLI---YQASIDALGIVSLI 185 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 SF+ G ++A GA QLSQFGA+I+ ++ I +R +G ++T +++AGR+G+A AE+G+ Sbjct: 186 SFLVGLILAFVGAIQLSQFGAQIYVSTIVGIAMVRVMGAIMTGIIMAGRTGAAYAAELGT 245 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 M++NEEIDA+RT G + L+ PR+ AL++ +PLL I A+ I+G +V I Sbjct: 246 MQVNEEIDALRTFGFSPTQFLVLPRMIALVLMMPLLCIYADLMGIMGGFVVGVFMLKINP 305 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 + + + LAN + GL+ + + + G G + +G+ T VV SI Sbjct: 306 IQYLTHTWQSVPLANFWIGLVHSTVFGVLVAMAGCYRGMRCGRSALGVGQATTAAVVTSI 365 Query: 355 SIVIIIDSLFAIFYFAIGI 373 ++I ++ + IG+ Sbjct: 366 LAIVIATAILTVCCNIIGV 384 >gi|17545032|ref|NP_518434.1| hypothetical protein RSc0313 [Ralstonia solanacearum GMI1000] gi|17427322|emb|CAD13841.1| putative abc-type transport system involved in resistance to organic solvents, permease component abc transporter protein [Ralstonia solanacearum GMI1000] Length = 374 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 104/377 (27%), Positives = 188/377 (49%), Gaps = 24/377 (6%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITE---IDTIGAELIMY 60 +G +V +G+W + ++E A V + + I++ + +TE ID GA+L+ Sbjct: 15 DGRSVAYLSGDWTTLALAERAG--VRSARRQIRAGLNTANAWCLTEVGRIDHFGAQLLWR 72 Query: 61 -FMEKYHGKIKLQGVSTH-IEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNL--HYHIGK 116 + ++ + + I+++ L +K+I + + N+ + H IG Sbjct: 73 AWGNRWPELLDARPDQRRMIDRVARLDPGGWKKRIAPRINPVTVLGNAMLDFARHLRIGV 132 Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 +V G ++ + F + ++ G + +Y G + + L+ F Sbjct: 133 AMV-------------GQLMFDLLRFVRAPHR--GPWREISANIYSTGYKALGITALVGF 177 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 + G V++ A QL FGA IF ++++ + +RE+G +L A+++AGRSGSAI A+IG M+ Sbjct: 178 LIGIVLSYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMR 237 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 + EE+DA+R MG+ LI P++ AL I++PLL + A+ G + DI Sbjct: 238 VTEELDAMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALGGGILAARFQLDISPTY 297 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 F + +AN++ G+ K I + A G + ++ SLG+ TT VV SI+I Sbjct: 298 FITSLPDAVPVANLWLGIGKGVVFGMLIALTACHFGLRIQPNTQSLGEGTTTSVVVSITI 357 Query: 357 VIIIDSLFAIFYFAIGI 373 VI+ D++FAI + +GI Sbjct: 358 VILADAVFAILFKDVGI 374 >gi|300692713|ref|YP_003753708.1| abc-type transport system, permease abc transporter protein (resistance to organic solvents) [Ralstonia solanacearum PSI07] gi|299079773|emb|CBJ52450.1| putative abc-type transport system, permease component abc transporter protein (resistance to organic solvents) [Ralstonia solanacearum PSI07] Length = 374 Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 103/375 (27%), Positives = 188/375 (50%), Gaps = 20/375 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITE---IDTIGAELIMY 60 +G +V +G+W + ++E A V + + I++ + +TE ID GA+L+ Sbjct: 15 DGRSVAYLSGDWTTLALAERAG--VRSARRQIRAGLNNANAWCLTEVGRIDHFGAQLLWR 72 Query: 61 -FMEKYHGKIKLQGVSTH-IEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + ++ ++ + I+++ L +K+I + N +G + Sbjct: 73 AWGNRWPERLDARPDQRRMIDRVARLDPGGWKKRIAPRI-----------NPVMVLGGAM 121 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 F ++G ++ + F + ++ G + +Y G + + L+ F+ Sbjct: 122 FDFAGHLQIGVAMVGQLMFDLLRFVRAPHR--GPWREISANIYSTGYKALGITALVGFLI 179 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G V++ A QL FGA IF ++++ + +RE+G +L A+++AGRSGSAI A+IG M++ Sbjct: 180 GIVLSYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVT 239 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE+DA+R MG+ LI P++ AL I++PLL + A+ G + DI F Sbjct: 240 EELDAMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFI 299 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + +AN++ G+ K I +VA G + ++ SLG+ TT VV SI+IVI Sbjct: 300 TSLPDAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIVI 359 Query: 359 IIDSLFAIFYFAIGI 373 + D++FAI + +GI Sbjct: 360 LADAVFAILFKDVGI 374 >gi|114563133|ref|YP_750646.1| hypothetical protein Sfri_1962 [Shewanella frigidimarina NCIMB 400] gi|114334426|gb|ABI71808.1| protein of unknown function DUF140 [Shewanella frigidimarina NCIMB 400] Length = 370 Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 72/210 (34%), Positives = 125/210 (59%), Gaps = 1/210 (0%) Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G G+ +V LIS + G ++A G+ QL Q GA+++ +L++I +RE+G L+T V++AGR Sbjct: 162 GPKGLAIVTLISLLVGMILAYLGSVQLRQLGAQVYVANLVAIGMVREMGALMTGVIMAGR 221 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 +G+A A++G+M++NEEIDA+R MG+ + L+ PR+ ALI +PL+ I ++ ++G + Sbjct: 222 TGAAYAAQLGTMQVNEEIDALRVMGIPTMEFLVLPRLLALIFIMPLMCIYSDVIGMLGGA 281 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 +V + + + + +I TGLIK+ I I + G G SN++G Sbjct: 282 LVA-NGMGVSYTQYILQTQVAIDWVDISTGLIKSLIFGFLIAIAGCQAGLLCGRDSNAVG 340 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 T VV++I +++ D+ I Y +GI Sbjct: 341 LATTHAVVKAIVFLVVADAALNILYDKLGI 370 >gi|303247224|ref|ZP_07333498.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans JJ] gi|302491383|gb|EFL51271.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans JJ] Length = 368 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 101/364 (27%), Positives = 176/364 (48%), Gaps = 27/364 (7%) Query: 1 MSE-NGITVFRFAGNWK----SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDT--I 53 M+E +G+ F+G W+ SP++S I A+ KS + + + +T+ D+ + Sbjct: 1 MAESDGVLTLTFSGTWRIDRPSPDLSPIR----AALGKSPAPKTLAFESAKVTDWDSRFL 56 Query: 54 GAELIMYFMEKYHG-KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHY 112 + + K HG L G+ + L L ++ +K + F ++ + Sbjct: 57 TQCRAILALAKAHGVTPDLSGLPAGAKSLLELAEKVPERQGAARKEASTPFLTRVADMAF 116 Query: 113 HIGK---KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + ++ F+ D L F S+ L +LI Y GV +P Sbjct: 117 GAWQGVHNLLDFVGDVTLACLALA---GGRAVFQRSN------LFALI---YQAGVEALP 164 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +V LIS + G ++A GA QLSQFGA+I+ ++ I +R +G ++T +++AGR+G+A Sbjct: 165 IVSLISLLVGLILAFVGAIQLSQFGAQIYVSTIVGIAMVRVMGAIMTGIIMAGRTGAAYA 224 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AE+G+M++NEEIDA+RT G + L+ PR+ AL++ +PLL I A+ I+G IV Sbjct: 225 AELGTMQVNEEIDALRTFGFSPTQFLVLPRMIALVLMMPLLCIYADIMGILGGFIVGVFM 284 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 I + + + LAN + GL+ + + + G G + ++G+ T Sbjct: 285 LKINPIQYLTHTWQSVPLANFWIGLVHSTVFGVLVAMAGCYRGMRCGRSALAVGQATTAA 344 Query: 350 VVQS 353 VV S Sbjct: 345 VVTS 348 >gi|56710306|dbj|BAD81021.1| permease component of ABC-type transport system [uncultured bacterium] Length = 405 Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 97/370 (26%), Positives = 172/370 (46%), Gaps = 31/370 (8%) Query: 8 VFRFAGNWK----SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY--- 60 V +G W+ +P + +A+ + A + Q+ VD +A+ D+ L+++ Sbjct: 43 VVALSGAWQLGRPAPRFAPLAESALSAGTGATQTARVTVDAAALGSWDS---SLLIFLRQ 99 Query: 61 ---FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 F E + + I L +L + + + P L +G Sbjct: 100 GQEFCEAHKLDFVTDALPDRITSLLALARAVPERAVDAEVPA--------LPLRARVGLA 151 Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV----GVSGVPVVIL 173 V + S + LG V+ + +G + R+ + V G +P+V L Sbjct: 152 GVSAWDASMAAVTFLGEVLQR------GALLLRGRVRMRWREFWVVVQSNGSGALPIVTL 205 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 I+ + G +IA G L +FGA ++ L+ LRE+G L+T ++IAGR+G+A AE+G Sbjct: 206 IALLVGVIIAFLGVVVLKRFGAGYYASYLVGFGMLREMGALMTGIIIAGRTGAAFAAELG 265 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 SMKI EEIDA+ T+G+ V L+ PR+ L + +PLL + A+ I+G V D+ Sbjct: 266 SMKITEEIDALTTLGISPVDHLVLPRVLGLFVMMPLLVVYADLVGIVGGMGVAVAMLDVT 325 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 F + + L++ G+ K IG+ +G G + ++G+ T+ VV S Sbjct: 326 PTQFMNGLLTAVVLSDALLGVFKGLIFGAIIGLAGCMKGLQAGSDAGAVGRAATSAVVIS 385 Query: 354 ISIVIIIDSL 363 I++VI+ +++ Sbjct: 386 ITLVILANAV 395 >gi|317401487|gb|EFV82119.1| integral membrane protein [Achromobacter xylosoxidans C54] Length = 377 Score = 132 bits (332), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 100/368 (27%), Positives = 186/368 (50%), Gaps = 13/368 (3%) Query: 8 VFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-FMEKY 65 V G+W ++E + + A A DL I+ +DTIGA LI + EK Sbjct: 21 VCHVGGDWSVLALAEPGEVERRRAAMAKATDAGARWDLQGISRLDTIGALLIWQAWGEKL 80 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 +++ S + +F+ ++ K +P+ ++ + +G +++ + Sbjct: 81 PERVRW---SAGQQDVFTALATNKGGKQALPRPEPAWGW------LRALGGAVLQAGENG 131 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + +LG ++ + F S +G + Q+Y G + + L+ F+ G V++ Sbjct: 132 RALLTMLGQLVLDL--FGMLSRPSRGPWREISAQVYRTGAQALGITALVGFLIGVVLSYL 189 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A QL GA+ F + L+ + +RE+G +L A+++AGRSGSAI A+IG M++ +E+DA+ Sbjct: 190 SAQQLQMIGADRFIVRLLGVSIVRELGPVLAAILVAGRSGSAITAQIGVMRVTQELDAML 249 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MG+ + LI PR+ AL +++PLL + + AI+G + + F Sbjct: 250 VMGISHGQRLILPRVVALAVTMPLLVLWTDAMAILGGMLAAQVQLGVSAQWFLQSLPDAI 309 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 +L N + G++K I ++A G + ++ SLG+ TT VV SI+ VI++D+L+A Sbjct: 310 SLTNYWIGILKGVTFGILIALIACHFGLRIQPNTESLGRGTTTSVVTSITGVILLDALYA 369 Query: 366 IFYFAIGI 373 + + ++GI Sbjct: 370 VIFSSVGI 377 >gi|82703102|ref|YP_412668.1| hypothetical protein Nmul_A1981 [Nitrosospira multiformis ATCC 25196] gi|82411167|gb|ABB75276.1| Protein of unknown function DUF140 [Nitrosospira multiformis ATCC 25196] Length = 378 Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 70/215 (32%), Positives = 128/215 (59%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 +Y G + + L+ F+ G V++ + QL FGA +F ++++ I +RE+G +L A+ Sbjct: 163 NLYRTGAQALGITALVGFLIGVVLSYLSSRQLQIFGAHVFIVNILGISVIRELGPMLAAI 222 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++AGRSGS++ A++G M++ EE+DA+ MG+ LI P++ AL +++PL+ + + A Sbjct: 223 LVAGRSGSSMTAQLGVMRVTEELDALTVMGIPHSLRLILPKVIALGLAMPLVVLWTSAVA 282 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 +IG V + + F SR ++N++ GL K AI +++ G + + Sbjct: 283 LIGGMTVAELQLGLGYKFFLSRLPDAVAVSNLWLGLGKGIVCGMAIALISCHFGLRIKSN 342 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + SLG+ T VV SI++VIIID++FA+ + +G+ Sbjct: 343 TESLGEGTTNSVVTSITVVIIIDAIFAVIFSDVGL 377 >gi|242277489|ref|YP_002989618.1| hypothetical protein Desal_0007 [Desulfovibrio salexigens DSM 2638] gi|242120383|gb|ACS78079.1| protein of unknown function DUF140 [Desulfovibrio salexigens DSM 2638] Length = 249 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 78/214 (36%), Positives = 124/214 (57%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LIR + VG +P+V +IS TG ++A Q A QL + GA + +L+ + +RE+G LL Sbjct: 33 LIRDLASVGADSIPIVSVISACTGIILALQSAQQLEKVGAISYVANLVGVTIIRELGPLL 92 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA+++ GRSG+A AEI +M+I+EEIDA+ MG++ VR L+ P++ A++I +P LT+ A+ Sbjct: 93 TAIIVTGRSGAAFTAEIATMQISEEIDALEVMGIEPVRFLVVPKMIAMLIMVPCLTVWAD 152 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 F I I +F+ L ++ GL+KA A AI ++ +GF Sbjct: 153 FVGIFSGGAFSAIALGINEVTYFNNSVEFLKLHDVLAGLVKAGGFAVAITLIGCWQGFLA 212 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+K T VV SI ++I++D F F Sbjct: 213 REGAADVGRKTTNSVVISIFMIILLDLFFTALNF 246 >gi|134297087|ref|YP_001120822.1| hypothetical protein Bcep1808_2996 [Burkholderia vietnamiensis G4] gi|134140244|gb|ABO55987.1| protein of unknown function DUF140 [Burkholderia vietnamiensis G4] Length = 374 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 110/388 (28%), Positives = 186/388 (47%), Gaps = 44/388 (11%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 E G TV R G W + ++ + + + DLS I +D +G + + Sbjct: 14 GEQGQTV-RLYGQWTALALARNRGAITRRVAGLASARPREWDLSGIERLDHVGGQALW-- 70 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + G+ GV Q ++ R + + P+R +V+F Sbjct: 71 --RVWGRKLPAGVELSDTQR-TIFERIERLDSQREAPER-----------------VVRF 110 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFL----LSLIRQ------------MYYVGV 165 D ++ LGL I GE G + LS++R+ +Y G Sbjct: 111 --DPVTR---LGLAIFTFGEHLQGGIAMFGRVILDALSVLRRPQTMPWKETSANIYSAGA 165 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 +P+ L++F+ G V++ A QL FGA + ++++ + +RE+G +L+A+++AGRSG Sbjct: 166 QALPITALVAFLIGIVLSYLSAQQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSG 225 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 SAI A IG M++ EE+DA+R MG+ L+ PR+ AL +++PLL + N A+ G ++ Sbjct: 226 SAITARIGVMRVTEELDAMRVMGIPHGLRLVLPRVLALGVAMPLLVMWTNIIALTGGALA 285 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 I F F +AN++ G+ K I +VA GF + +S SLG+ Sbjct: 286 AKFVLAIDFNYFVRSLPGVVPIANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEG 345 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAIGI 373 TT VV SI++VI+ D++FAI + +G+ Sbjct: 346 TTTSVVTSITVVILADAVFAILFQNVGL 373 >gi|88706598|ref|ZP_01104301.1| conserved hypothetical protein, membrane (DUF140) [Congregibacter litoralis KT71] gi|88699094|gb|EAQ96210.1| conserved hypothetical protein, membrane (DUF140) [Congregibacter litoralis KT71] Length = 370 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 99/359 (27%), Positives = 174/359 (48%), Gaps = 20/359 (5%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDT---IGAELIMYFMEKY 65 + +G+W S E+ + V + DS VD+S +++ D G + + Sbjct: 16 LQISGDWTSAELPAL---VPLFTTLLETRDSPAVDVSEVSDWDPRLEAGLLRLQRLAQAK 72 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 I+ G QL +L + + F + IG ++ DS Sbjct: 73 ARDIRYLGAPDSQTQLMNLATAVAPYEAPAASATGFFSTKQLRRSLADIGDDLL----DS 128 Query: 126 CSQAHILGLVI--SNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 +G+ + + TG S + + F+ SL + G + ++ L S + G ++A Sbjct: 129 LEFLGGVGIALWRTLTGR---SGMRRREFVESLAQ----AGPQAIGIITLTSILVGMILA 181 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 GA QL QFGA +F DL++I LRE+G L+TAV++AGR+G+A A++ +M+ NEEIDA Sbjct: 182 YLGAAQLQQFGAAVFVADLVAIGMLREMGALMTAVVMAGRTGAAYAAQLSTMQTNEEIDA 241 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 I T+G+D + L++PR+ AL + +PLL + A+ ++G ++V P + S+ + Sbjct: 242 ISTLGIDPMEFLVAPRVLALFLMMPLLVVYADALGVLGGAVVAGGMGVTPLQ-YISQLSA 300 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + F G+ K A I + G G +S ++G+ T VV ++ +I+ D+ Sbjct: 301 AITPTHFFVGIFKGFVFAALIATAGCRAGMNAGRNSEAVGQATTEAVVTAVVYLIVADA 359 >gi|237749352|ref|ZP_04579832.1| ABC transport system permease [Oxalobacter formigenes OXCC13] gi|229380714|gb|EEO30805.1| ABC transport system permease [Oxalobacter formigenes OXCC13] Length = 374 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 90/336 (26%), Positives = 174/336 (51%), Gaps = 19/336 (5%) Query: 41 IVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQ--LFSLISFTHRKKIKNQKP 98 + DL+ I E+D I A+ F+ + G+ + ++ EQ F+ + + K+ + Sbjct: 53 VWDLTRIRELDYISAQ----FLWESWGEKRPANLALTEEQGRFFARLEQAGQLKLPDTTK 108 Query: 99 QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158 + + F+N+ + + + + ++G ++ + F + + G + Sbjct: 109 PFLWPWQRFRNIVHKVSEHFSGMV-------ALVGQLMIDIVNFAKAPRR--GPWTEISA 159 Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 +Y+ G + + ++ F+ G V++ A QL FG ++F ++L+ I LRE+G LL A+ Sbjct: 160 NIYHAGAQALGITAVVGFLIGVVLSYLSAQQLHMFGGDVFLVNLLGISVLRELGPLLAAI 219 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++AGRSGS++ A++G M++ EE+ A++ MGL LI P++ AL I +PLL I + A Sbjct: 220 LVAGRSGSSMTAQLGVMRVTEELSAMQVMGLPQGFRLIMPKVIALSIVMPLLVIWTDVIA 279 Query: 279 IIGASIVIWKYYDIPFAV--FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 ++G + Y+I ++ F + +AN + G+ K I ++A G + Sbjct: 280 LLGGMLA--GSYEIGLSMSYFLASLPDAVPIANFWIGVGKGYVFGILIALIACYYGLKIK 337 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 ++ SLG+ T VV SI++VI+ D++FAI +G Sbjct: 338 PNTESLGEGTTRSVVTSITVVILADAIFAIVLQGVG 373 >gi|283853770|ref|ZP_06370995.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B] gi|283570832|gb|EFC18867.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B] Length = 385 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 92/355 (25%), Positives = 168/355 (47%), Gaps = 20/355 (5%) Query: 4 NGITVFRFAGNWKS----PEISEIADDVVMAINKSIQSDSAIVDLSAITEIDT---IGAE 56 NGI +G W+ P ++ + D A+ S + +A+T D+ Sbjct: 22 NGILTLTLSGVWRLDRPFPPLAPVKD----ALATSPAPRKLVFAATAVTGWDSRFLADCR 77 Query: 57 LIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116 ++ + ++++ G+ L L + ++ +K + F S +L + Sbjct: 78 AVLVLARERGVEVEVSGLPEGAASLLDLAAKVPERQGAARKTSHAAFLESMGDLGLGFAQ 137 Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 +V + LG V F+ +L+ +Y GV +P+V LIS Sbjct: 138 GVVNLL-------EFLGEVTLACLALLRGRAVFQRS--NLVTLIYQAGVEALPIVSLISL 188 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 + G ++A GA QLSQFGA+I+ ++ I +R +G ++T +++AGR+G+A AE+G+M+ Sbjct: 189 LVGLILAFVGAIQLSQFGAQIYVSTIVGIAMVRVMGAIMTGIIMAGRTGAAYAAELGTMQ 248 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 +NEEIDA++T G + L+ PR+ AL++ LPLL + A+ I+G IV I Sbjct: 249 VNEEIDALKTFGFSPTQFLVLPRMIALVLMLPLLCVYADLMGILGGFIVGVFMLHINPIQ 308 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 + + + LAN + GL+ + + + G G + ++G+ T+ VV Sbjct: 309 YLTHTWQSVPLANFWIGLVHSTVFGVLVAMAGCYRGMRCGRSALAVGQAATSAVV 363 >gi|83814459|ref|YP_444490.1| ABC transporter, permease [Salinibacter ruber DSM 13855] gi|83755853|gb|ABC43966.1| ABC transporter, permease [Salinibacter ruber DSM 13855] Length = 371 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 92/361 (25%), Positives = 175/361 (48%), Gaps = 27/361 (7%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIV--DLSAITEIDTIGAELIMYFME-----KY 65 G+W + D + +N + S A V D S + + D+ L+ + E + Sbjct: 18 GDWTLDR--PLPDARAVMVNAAPSSPVAAVAFDTSGLGDWDS---SLVTFLFEAAEYGRA 72 Query: 66 HG-KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFF--YNSFKNLHYHIGKKIVKFI 122 H +++ + T +E+L +L + + + Y +V F+ Sbjct: 73 HDLDVRIDTLPTSLERLVALSQAVPEADTTPEAADTALLARLGHWGLAAYDEAHALVTFL 132 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + +G +++ G +++ F ++L S +P+V +IS + G ++ Sbjct: 133 GQAVRS---VGAILTGRGRM-----RWRTFGVALQEST----ASALPIVTVISLLVGLIV 180 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A GA L +FGA+ F L+S LRE+G L+TA+++ GR+G+A AE+GSM++NEEID Sbjct: 181 AFLGAVVLQRFGADYFVSYLVSYGMLRELGALMTAIIMTGRTGAAFAAELGSMQVNEEID 240 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ T G+ + L++PRI A++++LP+LT+ A+ I+G V D+ F + Sbjct: 241 ALETFGISPIDFLVTPRILAVVLALPMLTLYADALGIVGGMGVAVTMLDLTTTQFLTGLL 300 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L++ G+ KA IG+ G G ++++G+ T+ VV I +++ ++ Sbjct: 301 EPVVLSDALVGIFKAVVYGGIIGLAGCMRGLQAGDDASAVGQATTSAVVTGILLIVFANA 360 Query: 363 L 363 + Sbjct: 361 I 361 >gi|33599154|ref|NP_886714.1| putative integral membrane protein [Bordetella bronchiseptica RB50] gi|33575200|emb|CAE30663.1| putative integral membrane protein [Bordetella bronchiseptica RB50] Length = 378 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 93/333 (27%), Positives = 169/333 (50%), Gaps = 14/333 (4%) Query: 43 DLSAITEIDTIGAELIM-YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP-QR 100 DL + +DTIGA L+ + ++ +++ S ++F + + + P R Sbjct: 58 DLRGVERLDTIGAHLLWGAWGQQLPERVRW---SDGQREVFQTLQRNRGEALPAPAPADR 114 Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 + + + + G+ I + G ++ + G F +G + Q+ Sbjct: 115 WGWLRAIGDAVFDAGRNGRALII-------MFGQLVLDLGAFL--RRPSRGPWREISAQV 165 Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 Y G + + L+ F+ G V++ A QL FGA+ F + L+ + +RE+G +L A+++ Sbjct: 166 YRTGAQALGITALVGFLIGVVLSYLSAQQLQMFGADRFIVRLLGVSIVRELGPVLAAILV 225 Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280 AGRSGSAI A+IG M++ +E+DA+ MG+ + LI PR+ AL I++PLL + + A++ Sbjct: 226 AGRSGSAITAQIGVMRVTQELDAMLVMGISHGQRLILPRVIALAITMPLLVVWTDAMALL 285 Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 G + + F + +L N + G+ K I +VA G + ++ Sbjct: 286 GGMLAAQMQLGVSAQWFLTSLPDAISLTNYWIGMFKGVSFGVLIALVACHFGLCIQPNTE 345 Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 SLG+ TT VV SI+ VI++D+L+A+ + +IGI Sbjct: 346 SLGRGTTTSVVTSITGVILVDALYAVIFSSIGI 378 >gi|313672871|ref|YP_004050982.1| hypothetical protein Calni_0908 [Calditerrivibrio nitroreducens DSM 19672] gi|312939627|gb|ADR18819.1| protein of unknown function DUF140 [Calditerrivibrio nitroreducens DSM 19672] Length = 256 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 72/214 (33%), Positives = 124/214 (57%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+QM ++G + + V+IL TG V A Q +FGAE ++ + RE+G +L Sbjct: 43 LIKQMEFIGANSISVIILTGTFTGMVFAFQSYIGFHKFGAEYMVGTVVGLGMARELGPVL 102 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 +A+M+A R+GSAI AEIG+MK+ E+IDA+ ++ +D V+ L++PRI A ++ +PLL +A Sbjct: 103 SAIMVAARAGSAITAEIGTMKVTEQIDALHSLAVDPVQYLVTPRILAGLLVMPLLNSIAV 162 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 F ++G V K DI ++ + L++++ G+IK+ + +V +G AV Sbjct: 163 FCGVLGGYFVGVKILDINRTLYLQYMYQYVDLSDLYNGMIKSVVFGLILTLVGCYKGMAV 222 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+ T VV S ++++ D + F F Sbjct: 223 SGGAEGVGRATTESVVLSCILILVFDYILTAFMF 256 >gi|325982943|ref|YP_004295345.1| hypothetical protein NAL212_2362 [Nitrosomonas sp. AL212] gi|325532462|gb|ADZ27183.1| protein of unknown function DUF140 [Nitrosomonas sp. AL212] Length = 370 Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 91/345 (26%), Positives = 179/345 (51%), Gaps = 15/345 (4%) Query: 31 INKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISF--T 88 +++ ++ + DL+ I +IDT G ++++ + K +LQ H E++F + T Sbjct: 38 LSREARNQNLYWDLTGIGQIDTAGT-ILLWRVWKTKRPDRLQLRPEH-EKMFQRLERLPT 95 Query: 89 HRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYK 148 H+ IK+ R + +GK ++ S ++G ++ + Sbjct: 96 HQSGIKH----RDLLWPITT-----LGKLVLVLWQHSVGLITLIGQLMLDVIYLIRHPVY 146 Query: 149 FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL 208 +S +Y G + + L+ F+ G V++ + QL FGA+IF I+++ I + Sbjct: 147 IPWREIS--ANLYRTGAQALGITALVGFLIGIVLSYLSSKQLQLFGADIFIINILGISII 204 Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268 RE+G +L A+++AGRSGSA+ A++G M++ +E+DA+ MG+ + LI P++ L I++P Sbjct: 205 RELGPMLAAILVAGRSGSAMTAQLGVMRVTQELDALTVMGISHSQRLILPKVLGLGIAMP 264 Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328 LL + + A++G + + + F + + + N++ GL K I ++A Sbjct: 265 LLVMWTSAVALLGGMVAAEIQLGLHYHYFITALPDSVPVGNLWLGLGKGIVCGMVIALIA 324 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 G + ++ SLG+ T VV +I++VIIID++FA+ + +G+ Sbjct: 325 CHFGLKIKPNTESLGEGTTASVVTAITMVIIIDAIFAVLFSDVGL 369 >gi|281356107|ref|ZP_06242600.1| protein of unknown function DUF140 [Victivallis vadensis ATCC BAA-548] gi|281317476|gb|EFB01497.1| protein of unknown function DUF140 [Victivallis vadensis ATCC BAA-548] Length = 263 Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 75/222 (33%), Positives = 124/222 (55%), Gaps = 3/222 (1%) Query: 154 LSLIRQMYYVGVSG---VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210 L L +YY+ + G +P+V+LI F+ G V+A G QLS+FG+EIF +D++ L+E Sbjct: 41 LRLKETLYYLDLCGAQSLPLVLLICFLMGGVLAINGQIQLSKFGSEIFIVDMVGFSVLKE 100 Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 G L+ A++ G++GSA +EIG+MK++EEI A+ T+G+ L+ P++ A++I+LPLL Sbjct: 101 FGPLMVALIATGQAGSAFASEIGTMKVDEEISALETLGIRPAAYLVLPKLIAMLIALPLL 160 Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330 T+ +F+ + G V +P A + R G++K+ A I + Sbjct: 161 TVFGDFAGLTGGLAVGITVAGLPLAAYVERTLDILDSTTFLLGVLKSFVFAVLITLAGCY 220 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 GF + +G+ T VV SI V++ +L + Y IG Sbjct: 221 CGFRSSGDAQGVGRAATAAVVISILFVVVATALLTVLYSFIG 262 >gi|294506238|ref|YP_003570296.1| ABC transporter permease [Salinibacter ruber M8] gi|294342566|emb|CBH23344.1| ABC transporter, permease [Salinibacter ruber M8] Length = 371 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 92/356 (25%), Positives = 172/356 (48%), Gaps = 27/356 (7%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIV--DLSAITEIDTIGAELIMYFME-----KY 65 G+W + D + +N + S A V D S + + D+ L+ + E + Sbjct: 18 GDWTLDR--PLPDARAVMVNAAPSSPVAAVAFDTSGLGDWDS---SLVTFLFEAAEYGRA 72 Query: 66 HG-KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFF--YNSFKNLHYHIGKKIVKFI 122 H +++ + T +E+L +L + + + Y +V F+ Sbjct: 73 HDLDVRIDTLPTSLERLVALSQAVPEADTTPEAEDTALLARLGHWGLAAYDEAHALVTFL 132 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + +G +++ G +++ F ++L S +P+V +IS + G ++ Sbjct: 133 GQAVRS---VGAILTGRGRM-----RWRTFGVALQEST----ASALPIVTVISLLVGLIV 180 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A GA L +FGA+ F L+S LRE+G L+TA+++ GR+G+A AE+GSM++NEEID Sbjct: 181 AFLGAVVLQRFGADYFVSYLVSYGMLRELGALMTAIIMTGRTGAAFAAELGSMQVNEEID 240 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ T G+ + L++PRI A++++LP+LT+ A+ I+G V D+ F + Sbjct: 241 ALETFGISPIDFLVTPRILAVVLALPMLTLYADALGIVGGMGVAVTMLDLTTTQFLTGLL 300 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 L++ G+ KA IG+ G G ++++G+ T+ VV I +++ Sbjct: 301 EPVVLSDALVGIFKAVVYGGIIGLAGCMRGLQAGDDASAVGQATTSAVVTGILLIV 356 >gi|33591357|ref|NP_879001.1| putative integral membrane protein [Bordetella pertussis Tohama I] gi|33570999|emb|CAE40477.1| putative integral membrane protein [Bordetella pertussis Tohama I] Length = 376 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 92/332 (27%), Positives = 168/332 (50%), Gaps = 12/332 (3%) Query: 43 DLSAITEIDTIGAELIM-YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 DL + +DTIGA L+ + ++ +++ S ++F + + + P Sbjct: 56 DLRGVERLDTIGAHLLWGAWGQQLPERVRW---SDGQREVFQTLQRNRGEALPAPAPADR 112 Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY 161 + + IG + + + + G ++ + G F +G + Q+Y Sbjct: 113 WGW------LRAIGDAVFDAGRNGRALVIMFGQLVLDLGAFL--RRPSRGPWREISAQVY 164 Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221 G + + L+ F+ G V++ A QL FGA+ F + L+ + +RE+G +L A+++A Sbjct: 165 RTGAQALGITALVGFLIGVVLSYLSAQQLQMFGADRFIVRLLGVSIVRELGPVLAAILVA 224 Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281 GRSGSAI A+IG M++ +E+DA+ MG+ + LI PR+ AL I++PLL + + A++G Sbjct: 225 GRSGSAITAQIGVMRVTQELDAMLVMGISHGQRLILPRVIALAITMPLLVVWTDAMALLG 284 Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341 + + F + +L N + G+ K I +VA G + ++ S Sbjct: 285 GMLAAQMQLGVSAQWFLTSLPDAISLTNYWIGMFKGVSFGILIALVACHFGLCIQPNTES 344 Query: 342 LGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 LG+ TT VV SI+ VI++D+L+A+ + +IGI Sbjct: 345 LGRGTTTSVVTSITGVILVDALYAVIFSSIGI 376 >gi|167585308|ref|ZP_02377696.1| hypothetical protein BuboB_08232 [Burkholderia ubonensis Bu] Length = 374 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 107/383 (27%), Positives = 186/383 (48%), Gaps = 40/383 (10%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G TV R G W + ++ V + + DLS I ID +G + + + Sbjct: 17 GPTV-RLYGQWTALALARNRGAVARRVAGLAKGRVREWDLSGIERIDHVGGQALW----R 71 Query: 65 YHGKIKLQGVSTHIEQ--LFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 G+ G++ Q +F I R++ + P+R + L G+ + F Sbjct: 72 VWGRKLPDGIALSETQRTIFERIERLDRQR---EAPERIERIDPVTRL----GRALFTFA 124 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ------------MYYVGVSGVPV 170 + G V+ + LS++R+ +Y G +P+ Sbjct: 125 EHLQGGIAMFGRVMLDA--------------LSVLRRPKTMPWKETSANVYSAGAQALPI 170 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 L++F+ G V++ A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A Sbjct: 171 TALVAFLIGIVLSYLSAQQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITA 230 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 +IG M++ EE+DA+R MG+ L+ PR+ AL +++PLL + N A+ G ++ Sbjct: 231 QIGVMRVTEELDAMRVMGIPHGLRLVLPRVLALGVAMPLLVMWTNIIALTGGALAAKLAL 290 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 I F+ F +AN++ GL K I +VA GF + +S SLG+ TT V Sbjct: 291 GIDFSFFVRSLPGVVPIANLYIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSV 350 Query: 351 VQSISIVIIIDSLFAIFYFAIGI 373 V SI++VI+ D++FA+ + +G+ Sbjct: 351 VTSITVVILADAVFAMLFQNVGL 373 >gi|33594879|ref|NP_882522.1| putative integral membrane protein [Bordetella parapertussis 12822] gi|33564955|emb|CAE39902.1| putative integral membrane protein [Bordetella parapertussis] Length = 378 Score = 129 bits (324), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 93/333 (27%), Positives = 169/333 (50%), Gaps = 14/333 (4%) Query: 43 DLSAITEIDTIGAELIM-YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP-QR 100 DL + +DTIGA L+ + ++ +++ S ++F + + + P R Sbjct: 58 DLRGVERLDTIGAHLLWGAWGQQLPERVRW---SDGQREVFQTLQRNRGEALPAPAPADR 114 Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 + + + + G+ I + G ++ + G F +G + Q+ Sbjct: 115 WGWLRAIGDAVFDAGRNGRALII-------MFGQLVLDLGAFL--RRPSRGPWREISAQV 165 Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 Y G + + L+ F+ G V++ A QL FGA+ F + L+ + +RE+G +L A+++ Sbjct: 166 YRTGAQALGITALVGFLIGVVLSYLSAQQLQMFGADRFIVRLLGVSIVRELGPVLAAILV 225 Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280 AGRSGSAI A+IG M++ +E+DA+ MG+ + LI PR+ AL I++PLL + + A++ Sbjct: 226 AGRSGSAITAQIGVMRVTQELDAMLVMGISHGQRLILPRVIALAITMPLLVVWTDAMALL 285 Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 G + + F + +L N + G+ K I +VA G + ++ Sbjct: 286 GGMLAAQMQLGVSAQWFLTSLPDAISLTNYWIGMFKGVSFGILIALVACHFGLCIQPNTE 345 Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 SLG+ TT VV SI+ VI++D+L+A+ + +IGI Sbjct: 346 SLGRGTTTSVVTSITGVILVDALYAVIFSSIGI 378 >gi|303256383|ref|ZP_07342397.1| ABC transporter, permease protein [Burkholderiales bacterium 1_1_47] gi|331001491|ref|ZP_08325109.1| hypothetical protein HMPREF9439_02780 [Parasutterella excrementihominis YIT 11859] gi|302859874|gb|EFL82951.1| ABC transporter, permease protein [Burkholderiales bacterium 1_1_47] gi|329568220|gb|EGG50037.1| hypothetical protein HMPREF9439_02780 [Parasutterella excrementihominis YIT 11859] Length = 354 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 101/339 (29%), Positives = 167/339 (49%), Gaps = 17/339 (5%) Query: 37 SDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFS--LISFTHRKKIK 94 S I D S +T D G L +Y + KL VS IE L++ L +F+ + K Sbjct: 31 SGQTIFDASDLTFCDESGLTL-LYELRSRPDAFKLINVSASIETLYNTMLKNFSPKPVEK 89 Query: 95 NQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLL 154 S + + I+ + C+ +L S +F G +L Sbjct: 90 KSLGVVSSLGKWLYDAASSTKQSIIFLGSACCALTDVL---------LHPSQIRF-GEIL 139 Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 S+ + G V ++ LI F+ G +IA + A FGA IF ++ + I RE+G L Sbjct: 140 SVSDE---AGSRAVGIICLIGFLMGVIIAFETALVAQIFGAVIFVVNGIGIAMTRELGPL 196 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGRSGSA A++G+ K+NEE++A+ T GL + L+ PR+ A + +PLL++ A Sbjct: 197 MTAILFAGRSGSAFAAQLGTQKVNEELNALTTFGLSPMYFLVVPRLIASSLVVPLLSVFA 256 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 I+G +V+ YDI + F+ + + T+ +I GL+KA I ++ + G Sbjct: 257 TILGILGGGLVM-AMYDITYTQFYVQLLKSVTVTDIVFGLVKAVIFGFVIALIGCQCGMN 315 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 G + ++G T VV+SI +++ID A+ +GI Sbjct: 316 TGAGAAAVGSSTTKSVVKSIIWIVVIDGAAALLTNRLGI 354 >gi|161523583|ref|YP_001578595.1| hypothetical protein Bmul_0403 [Burkholderia multivorans ATCC 17616] gi|189351647|ref|YP_001947275.1| putative ABC transporter permease [Burkholderia multivorans ATCC 17616] gi|160341012|gb|ABX14098.1| protein of unknown function DUF140 [Burkholderia multivorans ATCC 17616] gi|189335669|dbj|BAG44739.1| putative ABC transport system permease protein [Burkholderia multivorans ATCC 17616] Length = 374 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 105/374 (28%), Positives = 177/374 (47%), Gaps = 31/374 (8%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 R G W + ++ VV + DLS I +D +G + + + G+ Sbjct: 21 RLTGQWTALALARNRGAVVRRAESVATGSVSEWDLSGIGRLDHVGGQALW----RVWGRK 76 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNL---------HYHIGKKIV- 119 G++ Q ++ R + + P+R L H H G + Sbjct: 77 LPPGIALTATQ-RTIFERIERLDSQREAPERIVRVGPVTRLGLMLFAFAEHLHGGIAMFG 135 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + I D+ S L T + +S +Y G +P+ L++F+ G Sbjct: 136 RVILDALSV-----LRRPQTMPWKETSAN-----------IYSAGAQALPITALVAFLIG 179 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V++ A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ E Sbjct: 180 IVLSYLSAQQLQMFGANRYIVNILGLAVIRELGPVLSAILVAGRSGSAITAQIGVMRVTE 239 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DA+R MG+ LI PR+ AL +++PLL + N A+ G ++ I F Sbjct: 240 ELDAMRVMGIPHGLRLILPRVLALGVAMPLLVMWTNIVALTGGALAAKMVLGIDVNYFVR 299 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 +AN++ GL K I +VA GF + +S SLG+ TT VV SI++VI+ Sbjct: 300 SLPGVVPIANLYIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVIL 359 Query: 360 IDSLFAIFYFAIGI 373 D++FAI + +G+ Sbjct: 360 ADAVFAILFQNVGL 373 >gi|198282934|ref|YP_002219255.1| hypothetical protein Lferr_0798 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665617|ref|YP_002425137.1| ABC transporter, permease protein, putative [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247455|gb|ACH83048.1| protein of unknown function DUF140 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517830|gb|ACK78416.1| ABC transporter, permease protein, putative [Acidithiobacillus ferrooxidans ATCC 23270] Length = 378 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 73/211 (34%), Positives = 122/211 (57%) Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 G + +P++ LI F+ G VI+ Q A L+Q+GA I+ I++ + LRE G L+TA++++G Sbjct: 166 TGPNSLPILTLIGFLIGVVISFQSASTLAQYGANIYIINIAGLSILREFGPLITAIILSG 225 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 RSGSA A+IG M + EE+DA+RT G+ +R LI P++ L + +PLL + + + GA Sbjct: 226 RSGSAFTAQIGGMCVTEELDALRTFGIPPIRRLILPKVIGLALVMPLLVLWTDMVGLYGA 285 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 +V I F + N++ G++K I +A G V ++ SL Sbjct: 286 MLVAKLELGISNRFFIQQMPVVVPSFNLWLGVVKGALFGILIAWIAGFHGLKVKPNTTSL 345 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 ++ T VV SI+++I+ID++ A+ + GI Sbjct: 346 SRETTNSVVMSITVMILIDAILALVFANTGI 376 >gi|330818440|ref|YP_004362145.1| hypothetical protein bgla_1g35860 [Burkholderia gladioli BSR3] gi|327370833|gb|AEA62189.1| hypothetical protein bgla_1g35860 [Burkholderia gladioli BSR3] Length = 395 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 96/331 (29%), Positives = 168/331 (50%), Gaps = 11/331 (3%) Query: 43 DLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF 102 DLSAI +D +G + + + G +G++ Q ++ R ++P+ Sbjct: 75 DLSAIDRLDHVGGQALW----RVWGHRLPEGLTLTDNQ-RTIFERIQRLDEAREEPEPVI 129 Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162 ++ L G +++F + G VI + G +S +Y Sbjct: 130 RHDPVTRL----GLALMQFGEHLFGGIAMFGRVILDLGSIARRPKTMPWTEISA--NVYN 183 Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 G +P+ L++F+ G V++ A QL QFGA + ++++ + +RE+G +L A+++AG Sbjct: 184 AGAKALPITALVAFLIGIVLSYLSAQQLQQFGANRYIVNILGLSVIRELGPVLAAILVAG 243 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 RSGSAI A+IG M++ EE+DA+R MG+ ++ PR+ AL +++PLL + N A+ G Sbjct: 244 RSGSAITAQIGVMRVTEELDAMRVMGIPHGLRIVLPRVLALGVAMPLLVMWTNIVALSGG 303 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 ++ I F +AN++ GL K I +V GF + +S SL Sbjct: 304 ALAAKLALGIDVNFFIRSLPGVVPIANLWIGLGKGVVFGMLIALVGCHFGFRIKANSQSL 363 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 G+ TT VV SI++VI+ D++FAI + +G+ Sbjct: 364 GEGTTTSVVTSITVVILADAVFAILFQNVGL 394 >gi|196232812|ref|ZP_03131662.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428] gi|196223011|gb|EDY17531.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428] Length = 245 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 79/213 (37%), Positives = 125/213 (58%), Gaps = 1/213 (0%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 QM +GV +P+ L SF G +A Q A QL + GA F DL+ + LRE+G LL AV Sbjct: 33 QMVLIGVRALPMASLTSFSIGLTLAMQAAGQLRKMGASQFVPDLVILSLLRELGPLLVAV 92 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++ GRSGSA+ AE+G+M+++EEI+A+ M ++ +R LI PR A++I LP+LTI ++ Sbjct: 93 VVIGRSGSAVTAELGTMRVSEEIEALEVMAINPIRFLIVPRFLAMMIMLPVLTIFGSYVG 152 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 ++G + D A + A ++++GLIK+ A I +A G V Sbjct: 153 MVGGWSICHFALDYSTASYILHSFERARPWDLYSGLIKSVVFAWIIITIACHMGLRVEGG 212 Query: 339 SNSLGKKVTTCVVQSISIVIIID-SLFAIFYFA 370 + +G+ T VV S+ I++I + +L A+F+FA Sbjct: 213 AEGVGQATTGSVVWSLLIMLIANATLTALFFFA 245 >gi|221211088|ref|ZP_03584067.1| putative ABC transporter, permease protein [Burkholderia multivorans CGD1] gi|221168449|gb|EEE00917.1| putative ABC transporter, permease protein [Burkholderia multivorans CGD1] Length = 446 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 108/380 (28%), Positives = 180/380 (47%), Gaps = 32/380 (8%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G TV R G W + ++ VV + DLS I +D +G + + Sbjct: 88 QGQTV-RLTGQWTALALARNRGAVVRRAESVATGSVSEWDLSGIGRLDHVGGQALW---- 142 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNL---------HYHI 114 + G+ G++ Q ++ R + + P+R L H H Sbjct: 143 RVWGRKLPPGIALTATQ-RTIFERIERLDSQREAPERIVRVGPVTRLGLMLFAFAEHLHG 201 Query: 115 GKKIV-KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 G + + I D+ S L T + +S +Y G +P+ L Sbjct: 202 GIAMFGRVILDALSV-----LRRPQTMPWKETSAN-----------IYSAGAQALPITAL 245 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 ++F+ G V++ A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG Sbjct: 246 VAFLIGIVLSYLSAQQLQMFGANRYIVNILGLAVIRELGPVLSAILVAGRSGSAITAQIG 305 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 M++ EE+DA+R MG+ LI PR+ AL +++PLL + N A+ G ++ I Sbjct: 306 VMRVTEELDAMRVMGIPHGLRLILPRVLALGVAMPLLVMWTNIVALTGGALAAKMVLGID 365 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 F +AN++ GL K I +VA GF + +S SLG+ TT VV S Sbjct: 366 VNYFVRSLPGVVPIANLYIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTS 425 Query: 354 ISIVIIIDSLFAIFYFAIGI 373 I++VI+ D++FAI + +G+ Sbjct: 426 ITVVILADAVFAILFQNVGL 445 >gi|221199880|ref|ZP_03572923.1| putative ABC transporter, permease protein [Burkholderia multivorans CGD2M] gi|221207452|ref|ZP_03580461.1| putative ABC transporter, permease protein [Burkholderia multivorans CGD2] gi|221172655|gb|EEE05093.1| putative ABC transporter, permease protein [Burkholderia multivorans CGD2] gi|221180119|gb|EEE12523.1| putative ABC transporter, permease protein [Burkholderia multivorans CGD2M] Length = 446 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 108/380 (28%), Positives = 180/380 (47%), Gaps = 32/380 (8%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G TV R G W + ++ VV + DLS I +D +G + + Sbjct: 88 QGQTV-RLTGQWTALALARNRGAVVRRAESVATGSVSEWDLSGIGRLDHVGGQALW---- 142 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNL---------HYHI 114 + G+ G++ Q ++ R + + P+R L H H Sbjct: 143 RVWGRKLPPGIALTATQ-RTIFERIERLDSQREAPERVVRVGPITRLGLMLFAFAEHLHG 201 Query: 115 GKKIV-KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 G + + I D+ S L T + +S +Y G +P+ L Sbjct: 202 GIAMFGRVILDALSV-----LRRPQTMPWKETSAN-----------IYSAGAQALPITAL 245 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 ++F+ G V++ A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG Sbjct: 246 VAFLIGIVLSYLSAQQLQMFGANRYIVNILGLAVIRELGPVLSAILVAGRSGSAITAQIG 305 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 M++ EE+DA+R MG+ LI PR+ AL +++PLL + N A+ G ++ I Sbjct: 306 VMRVTEELDAMRVMGIPHGLRLILPRVLALGVAMPLLVMWTNIVALTGGALAAKMVLGID 365 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 F +AN++ GL K I +VA GF + +S SLG+ TT VV S Sbjct: 366 VNYFVRSLPGVVPIANLYIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTS 425 Query: 354 ISIVIIIDSLFAIFYFAIGI 373 I++VI+ D++FAI + +G+ Sbjct: 426 ITVVILADAVFAILFQNVGL 445 >gi|91792032|ref|YP_561683.1| hypothetical protein Sden_0670 [Shewanella denitrificans OS217] gi|91714034|gb|ABE53960.1| protein of unknown function DUF140 [Shewanella denitrificans OS217] Length = 369 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 104/368 (28%), Positives = 182/368 (49%), Gaps = 26/368 (7%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEKYHGKI 69 G+W+ + AD + AI QS S I+D A+ D+ A ++ + E+ + Sbjct: 21 GDWQLGHALD-ADSICAAIPS--QSRSVIIDTQALGLWDSSLAVALLQLSRWCEQAELPL 77 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 L ++QL L + + ++Q Q S NL G+ + + Sbjct: 78 SLDACPPSLQQLLKLATEVPSNQTQSQA-QLSLKQKLRANLTEQ-GQGVYDSL------- 128 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYY----VGVSGVPVVILISFVTGAVIAQQ 185 L + N+ A S+ +G + + + G G+ +V LIS + G ++A Sbjct: 129 ----LFLGNS--VLAISHWLRGKAKTRASDIIFFIEQAGPQGLAIVTLISLLVGMILAYL 182 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 G+ QL Q GA+++ DL++I +RE+G L+TAV++AGR+G+A A++G+M+ NEE+DA+ Sbjct: 183 GSVQLRQLGAQVYVADLVAIGMVREMGPLMTAVIMAGRTGAAYAAQLGTMQANEEVDALS 242 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MG+ + L+ PR+ AL+ +PL+ I ++ IIG IV + + + Sbjct: 243 VMGISAMEFLVVPRLVALVFIMPLMCIYSDAIGIIGGGIVA-NGMGVSATQYLLQAQVAV 301 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 +I TGL+K+ I I + G A G +SN++G T VV++I +++ D+ Sbjct: 302 DWLDITTGLVKSLIFGILIAIAGCQAGLACGRNSNAVGVATTKAVVKAIVFLVVSDAALN 361 Query: 366 IFYFAIGI 373 I Y +GI Sbjct: 362 ILYDKLGI 369 >gi|187476645|ref|YP_784668.1| membrane protein [Bordetella avium 197N] gi|115421231|emb|CAJ47736.1| putative membrane protein [Bordetella avium 197N] Length = 377 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 98/333 (29%), Positives = 169/333 (50%), Gaps = 14/333 (4%) Query: 43 DLSAITEIDTIGAELIMYFM-EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 DL I +DTIGA L+ E+ +++L + ++F+ ++ + + P Sbjct: 57 DLRGIQRLDTIGANLLWRLWGERLPERVRL---TDGQREVFNALA-VNPGAVAPAPP--- 109 Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQAHILG-LVISNTGEFCASSYKFKGFLLSLIRQM 160 + IG+ I ++ +LG LV+ G S +G + Q+ Sbjct: 110 --VTDRLSWVRAIGQAIFDAAHNGIMLLRMLGQLVLDFIGLLLRPS---RGPWREISAQI 164 Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 Y G + + L+ F+ G V++ A QL FGA+ F + L+ + +RE+G +L A+++ Sbjct: 165 YRTGAQALGITALVGFLIGVVLSYLSAQQLQMFGADRFIVRLLGVSIVRELGPVLAAILV 224 Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280 AGRSGSAI A+IG M++ +E+DA+ MG+ + LI PR+ AL I++PLL + + A++ Sbjct: 225 AGRSGSAITAQIGVMRVTQELDAMSVMGISQSQRLILPRVVALAITMPLLVLWTDAMALL 284 Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 G + I F + T+ N + G++K I +VA G + + Sbjct: 285 GGMLAAQMQLGISAQWFLESLPNAVTITNYWIGMVKGVSFGVLIALVACHFGLRIKPDTE 344 Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 SLG+ TT VV SI+ VI++D+L+A+ +GI Sbjct: 345 SLGRGTTTSVVTSITGVILVDALYAVILSGMGI 377 >gi|30248137|ref|NP_840207.1| ABC transporter permease [Nitrosomonas europaea ATCC 19718] gi|30180022|emb|CAD84017.1| possible ABC transport permease [Nitrosomonas europaea ATCC 19718] Length = 386 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 91/345 (26%), Positives = 179/345 (51%), Gaps = 24/345 (6%) Query: 36 QSDSAIV--DLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 QSD++ + DL+ ++++D GA + + G+ + + EQ + + Sbjct: 55 QSDASSLHWDLTDVSQLDYAGA----VMLWRIWGEQRPAHLLLRPEQERMFLRLEKSVSL 110 Query: 94 KNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGE-----FCASSYK 148 Q P+R F +GK++++F++ H+ G+ I+ +G+ F ++ Sbjct: 111 PEQ-PRRILFLPI-----SMLGKQLLRFLD------HLTGM-ITLSGQIVLDLFFLMTHP 157 Query: 149 FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL 208 + + +Y G + + ++ F+ G V++ + QL FGA+I+ ++++ + + Sbjct: 158 GRIPAREISANLYRTGAQALGITAVVGFLIGIVLSYLTSEQLHMFGADIYIVNILGMSII 217 Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268 RE+G +L A+++AGRSGSA+ A++G M++ EE+DA+ MG+ L+ P+I L I+LP Sbjct: 218 RELGPMLAAILVAGRSGSAMTAQLGVMRVTEELDALTVMGIPHSMRLVLPKIIGLGIALP 277 Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328 L+ + + A++G + + + T +AN++ GL K I ++A Sbjct: 278 LIVLWTSAIALLGGLVAAELQIGLSIHYALTALPDTVPIANLWLGLGKGMVCGMTIALIA 337 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 G + ++ SLG+ T VV SI+ VI+ID++FA+ + IGI Sbjct: 338 CHFGLRIKPNTESLGEGTTNSVVTSITAVILIDAIFAVAFSNIGI 382 >gi|293602529|ref|ZP_06684975.1| ABC superfamily ATP binding cassette transporter, ABC protein [Achromobacter piechaudii ATCC 43553] gi|292819291|gb|EFF78326.1| ABC superfamily ATP binding cassette transporter, ABC protein [Achromobacter piechaudii ATCC 43553] Length = 383 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 94/332 (28%), Positives = 174/332 (52%), Gaps = 12/332 (3%) Query: 43 DLSAITEIDTIGAELIMY-FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 DL I+ +DTIGA LI + EK +++ S + +F+ ++ ++ +++ P+ Sbjct: 63 DLHGISRLDTIGALLIWQAWGEKLPERVRW---SAGQQDVFNALAM-NKGEVQTAPPKPE 118 Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY 161 F +G I++ + + +LG ++ + G G + Q+Y Sbjct: 119 TF-----GWVRGLGGAILQAAENGRALLIMLGQLMLDLGGMLRRPRL--GPWREISAQVY 171 Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221 G + + L+ F+ G V++ A QL GA+ F + L+ + +RE+G +L A+++A Sbjct: 172 RTGAQALGITALVGFLIGVVLSYLSAQQLQMIGADRFIVRLLGVSIVRELGPVLAAILVA 231 Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281 GRSGSAI A+IG M++ +E+DA+ MG+ + LI PR+ AL +++PLL + + AI+G Sbjct: 232 GRSGSAITAQIGVMRVTQELDAMLVMGISHGQRLILPRVVALAVTMPLLVLWTDAMAILG 291 Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341 + + F + +L N + G+ K I ++A G + ++ S Sbjct: 292 GMLAAQMQLGVSAQWFLTSLPDAISLTNYWIGIFKGVTFGILIALIACHFGLRIQPNTES 351 Query: 342 LGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 LG+ TT VV SI+ VI++D+L+AI + ++G+ Sbjct: 352 LGRGTTTSVVTSITGVILLDALYAIIFSSVGV 383 >gi|116619717|ref|YP_821873.1| hypothetical protein Acid_0582 [Candidatus Solibacter usitatus Ellin6076] gi|116222879|gb|ABJ81588.1| protein of unknown function DUF140 [Candidatus Solibacter usitatus Ellin6076] Length = 265 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 73/218 (33%), Positives = 126/218 (57%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 +I QM +GV +P+V+L F +GAV+A Q + L+Q+G + ++S+ RE+G + Sbjct: 46 DIILQMDTIGVGSLPIVVLTGFFSGAVMALQMSRALAQYGQVGKTGTVVSVTLARELGPV 105 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 LTA+M+AGR+ S I +E+GSMK+ E+IDA+R +G D V+ L++PR+ A + LPLLTI+A Sbjct: 106 LTALMVAGRNASGIASELGSMKVTEQIDAMRALGTDPVQKLVTPRLIATGVMLPLLTIIA 165 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 +F + G I+ + ++P +++ ++ GL+K A I +V G Sbjct: 166 DFVGMFGGFIIAKFFLNLPPRQYWTSVWRALEWNDVTQGLLKPLIFAIVISLVGCFYGLR 225 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 + +G+ T VV + +V ++D L + + G Sbjct: 226 TTGGTQGVGRSTTQAVVLATVLVFVLDLLITKIFVSQG 263 >gi|326800463|ref|YP_004318282.1| hypothetical protein Sph21_3067 [Sphingobacterium sp. 21] gi|326551227|gb|ADZ79612.1| protein of unknown function DUF140 [Sphingobacterium sp. 21] Length = 254 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 119/223 (53%), Gaps = 4/223 (1%) Query: 141 EFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSI 200 E Y+FK +I Q Y VGV +P++ L F+TG V Q L FGA Sbjct: 26 ELVMPPYEFK----EIINQCYEVGVKSLPLISLTGFITGIVFTNQSRPSLEDFGATAMLP 81 Query: 201 DLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRI 260 L++I +R + L+TA++ AG+ GS I AE+GSMK+ E+IDA+ G + + L+ R+ Sbjct: 82 SLIAIAIVRALAPLVTALIAAGKVGSNIGAELGSMKVTEQIDAMEVSGTNPFKFLVVSRV 141 Query: 261 WALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320 A I +P+L+ F ++G+ + ++++ + F FF + T T +IF +IKA F Sbjct: 142 LATTIMIPILSCYTGFVGLMGSFLNVYQHESVSFISFFDQVFETVTFLDIFQAIIKAAFF 201 Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 IGIV +G+ + +GK VV S+ ++ I + L Sbjct: 202 GFTIGIVGCYQGYNSSKGTEGVGKAANAAVVASMFLIFIEEQL 244 >gi|167617722|ref|ZP_02386353.1| ABC transporter, permease protein [Burkholderia thailandensis Bt4] gi|257140414|ref|ZP_05588676.1| ABC transporter, permease protein [Burkholderia thailandensis E264] Length = 374 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 102/376 (27%), Positives = 181/376 (48%), Gaps = 35/376 (9%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 R +G W + ++ +V I + + DLS + +D +G + + + G+ Sbjct: 21 RLSGQWTALALARDRGNVARRIARLAKEPVGEWDLSGVDRLDHVGGQALW----RVWGRR 76 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 G++ Q ++ R + P+ + G+ + F Sbjct: 77 LPAGIALTDNQ-RTVFERIERLDAGREAPEPVVRIDPVT----RFGQGLFTFGEHLYGGI 131 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQ------------MYYVGVSGVPVVILISFV 177 +LG +I + LLS++R+ +Y G +P+ L++F+ Sbjct: 132 ALLGGLIVD--------------LLSVLRRPRTMPWTEISANVYAAGTKALPITALVAFL 177 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V++ A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ Sbjct: 178 IGIVLSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRV 237 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EE+DA+R MG+ + PR+ AL +++PLL + N A+ G ++ I F Sbjct: 238 TEELDAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDLNFF 297 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 S +AN+F GL K I +VA GF + +S SLG+ TT VV SI++V Sbjct: 298 VRSLPSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVV 357 Query: 358 IIIDSLFAIFYFAIGI 373 I+ D++FAI + +G+ Sbjct: 358 ILADAVFAILFQNVGL 373 >gi|167579644|ref|ZP_02372518.1| ABC transporter, permease protein [Burkholderia thailandensis TXDOH] Length = 374 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 102/376 (27%), Positives = 181/376 (48%), Gaps = 35/376 (9%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 R +G W + ++ +V I + + DLS + +D +G + + + G+ Sbjct: 21 RLSGQWTALALARDRGNVARRIARLAKEPVGEWDLSGVDRLDHVGGQALW----RVWGRR 76 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 G++ Q ++ R + P+ + G+ + F Sbjct: 77 LPAGIALTDNQ-RTVFERIERLDAGREAPEPVVRIDPVT----RFGQGLFTFGEHLYGGI 131 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQ------------MYYVGVSGVPVVILISFV 177 +LG +I + LLS++R+ +Y G +P+ L++F+ Sbjct: 132 ALLGGLIVD--------------LLSVLRRPRTMPWTEISANVYAAGTKALPITALVAFL 177 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V++ A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ Sbjct: 178 IGIVLSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRV 237 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EE+DA+R MG+ + PR+ AL +++PLL + N A+ G ++ I F Sbjct: 238 TEELDAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDLNFF 297 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 S +AN+F GL K I +VA GF + +S SLG+ TT VV SI++V Sbjct: 298 VRSLPSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVV 357 Query: 358 IIIDSLFAIFYFAIGI 373 I+ D++FAI + +G+ Sbjct: 358 ILADAVFAILFQNVGL 373 >gi|83720699|ref|YP_440931.1| ABC transporter permease [Burkholderia thailandensis E264] gi|83654524|gb|ABC38587.1| ABC transporter, permease protein [Burkholderia thailandensis E264] Length = 404 Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 102/376 (27%), Positives = 181/376 (48%), Gaps = 35/376 (9%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 R +G W + ++ +V I + + DLS + +D +G + + + G+ Sbjct: 51 RLSGQWTALALARDRGNVARRIARLAKEPVGEWDLSGVDRLDHVGGQALW----RVWGRR 106 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 G++ Q ++ R + P+ + G+ + F Sbjct: 107 LPAGIALTDNQR-TVFERIERLDAGREAPEPVVRIDPVT----RFGQGLFTFGEHLYGGI 161 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQ------------MYYVGVSGVPVVILISFV 177 +LG +I + LLS++R+ +Y G +P+ L++F+ Sbjct: 162 ALLGGLIVD--------------LLSVLRRPRTMPWTEISANVYAAGTKALPITALVAFL 207 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V++ A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ Sbjct: 208 IGIVLSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRV 267 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EE+DA+R MG+ + PR+ AL +++PLL + N A+ G ++ I F Sbjct: 268 TEELDAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDLNFF 327 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 S +AN+F GL K I +VA GF + +S SLG+ TT VV SI++V Sbjct: 328 VRSLPSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVV 387 Query: 358 IIIDSLFAIFYFAIGI 373 I+ D++FAI + +G+ Sbjct: 388 ILADAVFAILFQNVGL 403 >gi|78357028|ref|YP_388477.1| ABC transporter permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219433|gb|ABB38782.1| ABC transporter permease protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 373 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 92/348 (26%), Positives = 160/348 (45%), Gaps = 17/348 (4%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G V F G W + + + + + + + +T D+ +E Sbjct: 12 GRCVIVFQGRWTLHDTVPSVGKLALRLESDCRGGAVSFSCAGLTAWDSRFLTFCRSVLET 71 Query: 65 YHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN-LHYHIGKKIVK 120 G+ G+ + +L SL + Q P+R S K+ L +G+ + Sbjct: 72 LEGRGIAYDTSGLPDGVLRLLSLAA---------QVPEREGAAVSRKSPLSARMGEALHA 122 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFK-GFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + S +G V + C F+ +L+R + G +P+V LIS + G Sbjct: 123 AFAGTISVMEFIGDVTLSVLRMCIGRAVFRWSDTFALLR---FCGAQSLPIVSLISMLAG 179 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 + A GA QL FGAEI+ L+ I LR +G ++TA++++GR G+A AE+G+M++NE Sbjct: 180 LIFAFVGAVQLKMFGAEIYVASLVGIAMLRVMGAVMTAIIVSGRVGAAFAAELGTMQVNE 239 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDA T G+ + L+ PR+ AL++ +PLL + AN I+G + V W DI +F+ Sbjct: 240 EIDAFSTFGISPLDFLVLPRMLALVLMMPLLCVYANLMGIVGGAAVGWLMLDINLHQYFN 299 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 T +L + G+ + + + + G G ++++GK T Sbjct: 300 MTWQTVSLTHFGVGIAHSVVFGFVVAVCSCYMGIHCGRSASAVGKATT 347 >gi|311109431|ref|YP_003982284.1| hypothetical protein AXYL_06276 [Achromobacter xylosoxidans A8] gi|310764120|gb|ADP19569.1| hypothetical protein AXYL_06276 [Achromobacter xylosoxidans A8] Length = 354 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 99/365 (27%), Positives = 185/365 (50%), Gaps = 13/365 (3%) Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDS-AIVDLSAITEIDTIGAELIMY-FMEKYHGK 68 AG+W ++E + + +D A DL I +DTIGA LI + K + Sbjct: 1 MAGDWSVLALAEPGEVQRRREALACATDGGARWDLHGIGRLDTIGALLIWEAWGHKLPER 60 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 ++ S + +F+ ++ ++ + P+R + + +G+ I + I++ + Sbjct: 61 VRW---SAGQQDVFNALAM-NKGETPAAAPKRDPW-----SWPRAVGEAIFQAIDNGRAL 111 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +LG ++ + G G + Q+Y G + + L+ F+ G V++ A Sbjct: 112 LVMLGQLVLDFGGMLRRPRL--GPWREISAQVYRTGAQALGITALVGFLIGVVLSYLSAQ 169 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 QL GA+ F + L+ + +RE+G +L A+++AGRSGSAI A+IG M++ +E+DA+ MG Sbjct: 170 QLQMIGADRFIVRLLGVSIVRELGPVLAAILVAGRSGSAITAQIGVMRVTQELDAMLVMG 229 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + + LI PR+ AL +++PLL + + AI+G + + F +L Sbjct: 230 ISHGQRLILPRVVALAVTMPLLVLWTDAMAILGGMLAAQMQLGVSAQWFLQSLPDAISLT 289 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 N + G++K I ++A G + ++ SLG+ TT VV SI+ VI++D+ +A+ + Sbjct: 290 NYWIGILKGVTFGMLIALIACHFGLRIQPNTESLGRGTTTSVVTSITGVILLDAFYAVIF 349 Query: 369 FAIGI 373 ++GI Sbjct: 350 SSVGI 354 >gi|255019625|ref|ZP_05291705.1| ABC-type transport system involved in resistance to organic solvents, permease component [Acidithiobacillus caldus ATCC 51756] gi|254970928|gb|EET28410.1| ABC-type transport system involved in resistance to organic solvents, permease component [Acidithiobacillus caldus ATCC 51756] Length = 380 Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 78/210 (37%), Positives = 124/210 (59%) Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G +P++ LI F+ G VI+ Q A L+ +GA I+ I + + LRE G L+TAV++AGR Sbjct: 168 GPDSLPILSLIGFLIGIVISFQSAPTLASYGANIYIISIAGLSILREFGPLITAVILAGR 227 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 +GSA A+IG+M++ EE+DA+RT G+ V+ LI P++ AL I+LPLL + + AI+GA Sbjct: 228 TGSAFTAQIGAMRVTEELDALRTFGISPVQRLILPKVIALAITLPLLVVWTDAVAILGAI 287 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 IV I + F N + G+ K I V+ G V +++SL Sbjct: 288 IVAKLDLGISASFFLREMPIMVPDFNFWLGIGKGILFGILIAWVSGYHGLKVQPNTDSLS 347 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 ++ T VV ++++VI+ID++ A+ + GI Sbjct: 348 RETTDSVVLTLTLVIVIDAVLAMVFANTGI 377 >gi|114777488|ref|ZP_01452485.1| ABC-type transport system involved in resistance to organic solvents [Mariprofundus ferrooxydans PV-1] gi|114552270|gb|EAU54772.1| ABC-type transport system involved in resistance to organic solvents [Mariprofundus ferrooxydans PV-1] Length = 257 Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 76/215 (35%), Positives = 120/215 (55%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q VGV +PVV+L + TG V+A Q +F AE + ++S+ +RE+G +L Sbjct: 43 LLQQAEEVGVQSLPVVMLTALFTGMVLALQSYIVFHRFAAESLTGLVVSMSLVRELGPVL 102 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 +M+AGR G+A AE+G+M++ E+IDA+ T+ D VR LI PR+ A+ + +PLL ++A+ Sbjct: 103 VGLMVAGRVGAAFAAELGTMRVTEQIDALWTLSTDPVRYLIMPRLIAVTLMMPLLVVVAD 162 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 F I G + D +V+ L++ +TGL+KA F IGI+ EGF Sbjct: 163 FIGIYGGYAISIYLLDQNPSVYIENTTQYMELSDFYTGLVKAGFFGILIGIIGCTEGFNC 222 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +G T VV S ++I D + FA Sbjct: 223 KGGAAGVGTATTRAVVISCMSILISDYFLTAWMFA 257 >gi|254251295|ref|ZP_04944613.1| hypothetical protein BDAG_00477 [Burkholderia dolosa AUO158] gi|124893904|gb|EAY67784.1| hypothetical protein BDAG_00477 [Burkholderia dolosa AUO158] Length = 386 Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 78/215 (36%), Positives = 128/215 (59%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 +Y G +P+ L++F+ G V++ A QL FGA + ++++ + +RE+G +L+A+ Sbjct: 171 NVYSAGAQALPITALVAFLIGIVLSYLSAQQLQMFGANRYIVNILGLSVIRELGPVLSAI 230 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++AGRSGSAI A+IG M++ EE+DA+R MG+ LI PR+ AL +++PLL + N A Sbjct: 231 LVAGRSGSAITAQIGVMRVTEELDAMRVMGIPHGLRLILPRVLALGVAMPLLVMWTNIVA 290 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 + G ++ I F +AN++ GL K I +VA GF + + Sbjct: 291 LTGGALAAKMVLGIDVNYFVRSLPGVVPIANLYIGLGKGVVFGMLIALVACHFGFRIKAN 350 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 S SLG+ TT VV SI++VI+ D++FAI + +G+ Sbjct: 351 SQSLGEGTTTSVVTSITVVILADAVFAILFQNVGL 385 >gi|254000132|ref|YP_003052195.1| hypothetical protein Msip34_2431 [Methylovorus sp. SIP3-4] gi|313202095|ref|YP_004040753.1| hypothetical protein MPQ_2372 [Methylovorus sp. MP688] gi|253986811|gb|ACT51668.1| protein of unknown function DUF140 [Methylovorus sp. SIP3-4] gi|312441411|gb|ADQ85517.1| conserved hypothetical protein [Methylovorus sp. MP688] Length = 371 Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 90/366 (24%), Positives = 171/366 (46%), Gaps = 15/366 (4%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 R G W + ++ A+ DL A ++DT GA +++ + GK+ Sbjct: 19 RLLGQWSLRALDNDFAELKQALQPFFSDPFTQWDLLATEQLDTAGATILL---NGWEGKL 75 Query: 70 --KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 ++Q V+ LF+ + + +F + L + + F+ Sbjct: 76 DARMQ-VTEEQRALFTTLQGLRVPARTGSQFDWAFPLVATGELVMKFAQHLTDFVQLIGL 134 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + ++ S++ ++ F+ ++ Y GV+ +PV L+ F+ G ++ + Sbjct: 135 LLLEMLYLVRR-----PSAFPWREFMANI----YKSGVTALPVTGLLGFMIGVAMSYLMS 185 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA+IF ++++ + +RE+G +L A+++AGRSGSA+ A+IG M++ EEIDA+ TM Sbjct: 186 SQLRTFGADIFIVNILGLSMIRELGPILMAILVAGRSGSAMTAQIGVMRVTEEIDALTTM 245 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ + ++ P++ L P L + +F + G ++ + F FF Sbjct: 246 GVSRILRIVLPKVLGLTFVAPFLVLWTSFWGLAGGALSANTELGLSFRFFFDYLPMVVEP 305 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 N+ L K + +VA G + ++ SL T+ VV +I+ VI++D+ FAI Sbjct: 306 VNLTLSLFKGLLFGFVVTLVACHFGLRIMPNTESLSASTTSSVVTAITSVILLDAAFAIL 365 Query: 368 YFAIGI 373 IG+ Sbjct: 366 TSGIGV 371 >gi|209521691|ref|ZP_03270381.1| protein of unknown function DUF140 [Burkholderia sp. H160] gi|209497882|gb|EDZ98047.1| protein of unknown function DUF140 [Burkholderia sp. H160] Length = 388 Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 107/372 (28%), Positives = 188/372 (50%), Gaps = 20/372 (5%) Query: 8 VFRFAGNWKSPEISEIADDV-VMAINKSIQSDSAI--VDLSAITEIDTIGAELIMYFMEK 64 + R +G W + ++ + V+ + +++ I DLS + +D +G + + + Sbjct: 31 IVRLSGQWTALALARDRETGHVIPLLRALTGAQGIGEWDLSGVDRMDHVGGQALW----R 86 Query: 65 YHGKIKLQGVSTHIEQ--LFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 G+ G + Q +F I+ + + R + F L G I F+ Sbjct: 87 VWGRKMPPGTALTDTQRDIFERIALLDTVRESAEPVSR---IDPFTRL----GLGIFSFL 139 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR-QMYYVGVSGVPVVILISFVTGAV 181 + +LG V+ + A + K K + I +Y G +P+ L++F+ G V Sbjct: 140 DHMQGGVTMLGRVVL---DLLAIARKPKLTPWTEISANIYNAGARALPITALVAFLIGIV 196 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 ++ A QL FGA F ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+ Sbjct: 197 LSYLSAQQLRIFGANQFIVNILGLAVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEEL 256 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+R MG+ LI PR+ AL +++PLL + N ++ G ++ I + F + Sbjct: 257 DAMRVMGIPHGLRLILPRVVALAVAMPLLVMWTNVISLTGGALAAKLVLGIEMSFFARQL 316 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 S +AN++ GL K I I GF + +S SLG+ TT VV SI+IVI+ D Sbjct: 317 PSVVPIANLWIGLGKGAVFGMLIAIAGCHFGFRIKANSQSLGEGTTTSVVTSITIVILAD 376 Query: 362 SLFAIFYFAIGI 373 ++FAI + +G+ Sbjct: 377 AVFAILFQNVGL 388 >gi|73539807|ref|YP_294327.1| hypothetical protein Reut_A0101 [Ralstonia eutropha JMP134] gi|72117220|gb|AAZ59483.1| Protein of unknown function DUF140 [Ralstonia eutropha JMP134] Length = 357 Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 96/338 (28%), Positives = 168/338 (49%), Gaps = 13/338 (3%) Query: 37 SDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ-GVSTHIEQLFSLISFTHRKKIKN 95 D A L+ + ++D IG +L+ + + GK+ + S ++F I+ H + Sbjct: 32 PDDAHWSLAGVDKLDHIGGQLLW---QAWDGKLPQRLDASEGQRRVFERIADLHADGWRK 88 Query: 96 QKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLS 155 +R +N G ++ F + + +LG + + F + +G Sbjct: 89 HIVER---FNPIT----LFGASVLSFCAQAANGVSMLGQLTFDLIRF--ARMPQRGPWRE 139 Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 + +Y +G + + L+ F+ G V++ A QL FGA F ++++ + +RE+G +L Sbjct: 140 ISANIYNIGYKALGITALVGFLIGIVLSYLSANQLRTFGASTFIVNILGMAVIRELGPVL 199 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A+++AGRSGSAI A+IG M++ EE+DA+R MG+ LI PR+ AL + +PLL + Sbjct: 200 AAILVAGRSGSAITAQIGVMRVTEELDAMRVMGISHGFRLIMPRVIALAVCMPLLVAWTD 259 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 A+ G I I F +AN++ GL K IG+ A G + Sbjct: 260 VLALAGGIIAARMQLGISPTFFLRALPDAVPVANLWLGLGKGVAFGILIGLAACHFGLRI 319 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 ++ SLG+ T VV SI+IVI+ D++FA+ + +G+ Sbjct: 320 KPNTQSLGEGTTASVVVSITIVIVADAIFAVMFKDVGL 357 >gi|307635079|gb|ADI85448.2| ABC transporter, membrane protein of unknown function DUF140 [Geobacter sulfurreducens KN400] Length = 380 Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 78/277 (28%), Positives = 140/277 (50%), Gaps = 3/277 (1%) Query: 98 PQRSFFYN-SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156 P+++ + S L I +++ + LG V G A +F+ L Sbjct: 106 PEQTLTHGGSRPPLLERIADRVIGMWKSMVEMSAFLGEVTVACGRLLAGRARFRRS--EL 163 Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + M G +P+V LISF+ G ++A GA QLS FGA+I+ L+ I +R +G ++T Sbjct: 164 LAIMQECGAQALPIVSLISFLVGLILAFVGAVQLSMFGAQIYVASLVGIGIVRIMGAIMT 223 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 +++AGR+G+A A +G+M++NEEIDA+ T+G+ V L+ PR+ AL++ +PLL + A+ Sbjct: 224 GIIMAGRTGAAFAARLGTMQVNEEIDALATLGISPVEFLVIPRVAALVLMMPLLCLYADL 283 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 I+G V D+ + + L + + GL + + + G G Sbjct: 284 MGILGGLAVGVLMLDLNVTEYITMTKKAVRLKDFWVGLFHSGVFGVLVALAGCLRGIQCG 343 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 ++S+G T+ VV I +++ ++ + +GI Sbjct: 344 RSASSVGDAATSAVVTGIVSIVVATAVITVICNILGI 380 >gi|289547869|ref|YP_003472857.1| hypothetical protein Thal_0093 [Thermocrinis albus DSM 14484] gi|289181486|gb|ADC88730.1| protein of unknown function DUF140 [Thermocrinis albus DSM 14484] Length = 245 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 72/209 (34%), Positives = 117/209 (55%) Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 L ++Q+ Y+G VPVV++ S +G VIA Q +F AE ++++ RE+G Sbjct: 29 LYHFVKQLAYLGAETVPVVVITSLFSGGVIALQTYSTFHRFNAEFLIGAVVALSMFRELG 88 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 +LTA+M+ R GSA+ A IG+M+I E+IDA+ MG++ V L++PRI A ++ LPLLTI Sbjct: 89 PVLTALMVTARVGSAMTASIGTMRITEQIDALEVMGMNPVSYLVTPRIVAGVLGLPLLTI 148 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 +++ + I+G V + + +F+ R + GL KA F + V+ G Sbjct: 149 ISDVAGILGGWFVAVGLFGVNNHLFWERMRDLVEFYDFVGGLYKAVFFGLVVSAVSCYFG 208 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIID 361 F + +G+ T+ VV S +V+I D Sbjct: 209 FYTKGGTEGVGRATTSSVVTSSMLVLISD 237 >gi|167717852|ref|ZP_02401088.1| ABC transporter, permease protein [Burkholderia pseudomallei DM98] Length = 374 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 104/374 (27%), Positives = 179/374 (47%), Gaps = 16/374 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 G TV R G W + ++ +V I + + DLS + +D +G + + Sbjct: 14 GSQGRTV-RLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALW-- 70 Query: 62 MEKYHGKIKLQGVSTHIEQ--LFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 + G+ G++ Q +F I R + P+ + G+ + Sbjct: 71 --RVWGRRLPDGIALTDNQRVVFERI---ERLDAGRESPEPVVRIDPVT----RFGQGLF 121 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 F +LG +I + +S +Y G +P+ L++F+ G Sbjct: 122 TFGEHLYGGIALLGSLIVDLLAVLRRPRTMPWTEISA--NVYAAGTKALPITALVAFLIG 179 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V++ A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ E Sbjct: 180 IVLSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTE 239 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DA+R MG+ + PR+ AL +++PLL + N A+ G ++ I F Sbjct: 240 ELDAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVR 299 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 S +AN+F GL K I +VA GF + +S SLG+ TT VV SI++VI+ Sbjct: 300 SLPSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVIL 359 Query: 360 IDSLFAIFYFAIGI 373 D++FAI + +G+ Sbjct: 360 ADAVFAILFQNVGL 373 >gi|53718041|ref|YP_107027.1| hypothetical protein BPSL0401 [Burkholderia pseudomallei K96243] gi|76809874|ref|YP_332026.1| ABC transporter permease [Burkholderia pseudomallei 1710b] gi|126441439|ref|YP_001057484.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 668] gi|126452246|ref|YP_001064733.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|134279780|ref|ZP_01766492.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|167736870|ref|ZP_02409644.1| ABC transporter, permease protein [Burkholderia pseudomallei 14] gi|167813976|ref|ZP_02445656.1| ABC transporter, permease protein [Burkholderia pseudomallei 91] gi|167822497|ref|ZP_02453968.1| ABC transporter, permease protein [Burkholderia pseudomallei 9] gi|167844078|ref|ZP_02469586.1| ABC transporter, permease protein [Burkholderia pseudomallei B7210] gi|167892582|ref|ZP_02479984.1| ABC transporter, permease protein [Burkholderia pseudomallei 7894] gi|167901079|ref|ZP_02488284.1| ABC transporter, permease protein [Burkholderia pseudomallei NCTC 13177] gi|167909299|ref|ZP_02496390.1| ABC transporter, permease protein [Burkholderia pseudomallei 112] gi|167917331|ref|ZP_02504422.1| ABC transporter, permease protein [Burkholderia pseudomallei BCC215] gi|226193717|ref|ZP_03789320.1| putative ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|237810635|ref|YP_002895086.1| putative ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] gi|242316672|ref|ZP_04815688.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|254181998|ref|ZP_04888595.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 1655] gi|254187927|ref|ZP_04894439.1| putative ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|254196514|ref|ZP_04902938.1| putative ABC transporter, permease protein [Burkholderia pseudomallei S13] gi|254260256|ref|ZP_04951310.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 1710a] gi|254295953|ref|ZP_04963410.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 406e] gi|52208455|emb|CAH34389.1| putative membrane protein [Burkholderia pseudomallei K96243] gi|76579327|gb|ABA48802.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710b] gi|126220932|gb|ABN84438.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 668] gi|126225888|gb|ABN89428.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|134248980|gb|EBA49062.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|157805700|gb|EDO82870.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 406e] gi|157935607|gb|EDO91277.1| putative ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|169653257|gb|EDS85950.1| putative ABC transporter, permease protein [Burkholderia pseudomallei S13] gi|184212536|gb|EDU09579.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 1655] gi|225934295|gb|EEH30279.1| putative ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|237504399|gb|ACQ96717.1| putative ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] gi|242139911|gb|EES26313.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|254218945|gb|EET08329.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 1710a] Length = 374 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 105/375 (28%), Positives = 183/375 (48%), Gaps = 18/375 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 G TV R G W + ++ +V I + + DLS + +D +G + + Sbjct: 14 GSQGRTV-RLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALW-- 70 Query: 62 MEKYHGKIKLQGVSTHIEQ--LFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 + G+ G++ Q +F I + + R F + G+ + Sbjct: 71 --RVWGRRLPDGIALTDNQRVVFERIERLDAGRESPEPVVRIDPVTRFGQGLFTFGEHLY 128 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR-QMYYVGVSGVPVVILISFVT 178 I A + GL++ + A + + + I +Y G +P+ L++F+ Sbjct: 129 GGI------ALLGGLIV----DLLAVLRRPRTMPWTEISANVYAAGTKALPITALVAFLI 178 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G V++ A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ Sbjct: 179 GIVLSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVT 238 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE+DA+R MG+ + PR+ AL +++PLL + N A+ G ++ I F Sbjct: 239 EELDAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFV 298 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 S +AN+F GL K I +VA GF + +S SLG+ TT VV SI++VI Sbjct: 299 RSLPSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVI 358 Query: 359 IIDSLFAIFYFAIGI 373 + D++FAI + +G+ Sbjct: 359 LADAVFAILFQNVGL 373 >gi|217419400|ref|ZP_03450906.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 576] gi|217396704|gb|EEC36720.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 576] Length = 366 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 105/375 (28%), Positives = 183/375 (48%), Gaps = 18/375 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 G TV R G W + ++ +V I + + DLS + +D +G + + Sbjct: 6 GSQGRTV-RLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALW-- 62 Query: 62 MEKYHGKIKLQGVSTHIEQ--LFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 + G+ G++ Q +F I + + R F + G+ + Sbjct: 63 --RVWGRRLPDGIALTDNQRVVFERIERLDAGRESPEPVVRIDPVTRFGQGLFTFGEHLY 120 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR-QMYYVGVSGVPVVILISFVT 178 I A + GL++ + A + + + I +Y G +P+ L++F+ Sbjct: 121 GGI------ALLGGLIV----DLLAVLRRPRTMPWTEISANVYAAGTKALPITALVAFLI 170 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G V++ A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ Sbjct: 171 GIVLSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVT 230 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE+DA+R MG+ + PR+ AL +++PLL + N A+ G ++ I F Sbjct: 231 EELDAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFV 290 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 S +AN+F GL K I +VA GF + +S SLG+ TT VV SI++VI Sbjct: 291 RSLPSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVI 350 Query: 359 IIDSLFAIFYFAIGI 373 + D++FAI + +G+ Sbjct: 351 LADAVFAILFQNVGL 365 >gi|254176752|ref|ZP_04883409.1| putative ABC transporter, permease protein [Burkholderia mallei ATCC 10399] gi|254202028|ref|ZP_04908392.1| putative ABC transporter, permease protein [Burkholderia mallei FMH] gi|254207359|ref|ZP_04913710.1| putative ABC transporter, permease protein [Burkholderia mallei JHU] gi|147747922|gb|EDK54998.1| putative ABC transporter, permease protein [Burkholderia mallei FMH] gi|147752901|gb|EDK59967.1| putative ABC transporter, permease protein [Burkholderia mallei JHU] gi|160697793|gb|EDP87763.1| putative ABC transporter, permease protein [Burkholderia mallei ATCC 10399] Length = 374 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 105/375 (28%), Positives = 183/375 (48%), Gaps = 18/375 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 G TV R G W + ++ +V I + + DLS + +D +G + + Sbjct: 14 GSQGRTV-RLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALW-- 70 Query: 62 MEKYHGKIKLQGVSTHIEQ--LFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 + G+ G++ Q +F I + + R F + G+ + Sbjct: 71 --RVWGRRLPDGIALTDNQRVVFKRIERLDAGRESPEPVVRIDPVTRFGQGLFTFGEHLY 128 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR-QMYYVGVSGVPVVILISFVT 178 I A + GL++ + A + + + I +Y G +P+ L++F+ Sbjct: 129 GGI------ALLGGLIV----DLLAVLRRPRTMPWTEISANVYAAGTKALPITALVAFLI 178 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G V++ A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ Sbjct: 179 GIVLSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVT 238 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE+DA+R MG+ + PR+ AL +++PLL + N A+ G ++ I F Sbjct: 239 EELDAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFV 298 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 S +AN+F GL K I +VA GF + +S SLG+ TT VV SI++VI Sbjct: 299 RSLPSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVI 358 Query: 359 IIDSLFAIFYFAIGI 373 + D++FAI + +G+ Sbjct: 359 LADAVFAILFQNVGL 373 >gi|53724609|ref|YP_101915.1| ABC transporter permease [Burkholderia mallei ATCC 23344] gi|52428032|gb|AAU48625.1| ABC transporter, permease protein [Burkholderia mallei ATCC 23344] Length = 355 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 101/367 (27%), Positives = 176/367 (47%), Gaps = 15/367 (4%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G W + ++ +V I + + DLS + +D +G + + + G+ Sbjct: 1 MRLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALW----RVWGR 56 Query: 69 IKLQGVSTHIEQ--LFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 G++ Q +F I R + P+ + G+ + F Sbjct: 57 RLPDGIALTDNQRVVFKRI---ERLDAGRESPEPVVRIDPVT----RFGQGLFTFGEHLY 109 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 +LG +I + +S +Y G +P+ L++F+ G V++ Sbjct: 110 GGIALLGGLIVDLLAVLRRPRTMPWTEISA--NVYAAGTKALPITALVAFLIGIVLSYLS 167 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R Sbjct: 168 AQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRV 227 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG+ + PR+ AL +++PLL + N A+ G ++ I F S Sbjct: 228 MGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSLPSVVP 287 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 +AN+F GL K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI Sbjct: 288 IANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAI 347 Query: 367 FYFAIGI 373 + +G+ Sbjct: 348 LFQNVGL 354 >gi|67642420|ref|ZP_00441177.1| putative ABC transporter, permease protein [Burkholderia mallei GB8 horse 4] gi|121598966|ref|YP_991583.1| putative ABC transporter, permease protein [Burkholderia mallei SAVP1] gi|126450485|ref|YP_001082718.1| putative ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|251768288|ref|ZP_02270158.2| putative ABC transporter, permease protein [Burkholderia mallei PRL-20] gi|254357616|ref|ZP_04973890.1| putative ABC transporter, permease protein [Burkholderia mallei 2002721280] gi|121227776|gb|ABM50294.1| putative ABC transporter, permease protein [Burkholderia mallei SAVP1] gi|126243355|gb|ABO06448.1| putative ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|148026680|gb|EDK84765.1| putative ABC transporter, permease protein [Burkholderia mallei 2002721280] gi|238523569|gb|EEP87007.1| putative ABC transporter, permease protein [Burkholderia mallei GB8 horse 4] gi|243060282|gb|EES42468.1| putative ABC transporter, permease protein [Burkholderia mallei PRL-20] Length = 366 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 105/375 (28%), Positives = 183/375 (48%), Gaps = 18/375 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 G TV R G W + ++ +V I + + DLS + +D +G + + Sbjct: 6 GSQGRTV-RLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALW-- 62 Query: 62 MEKYHGKIKLQGVSTHIEQ--LFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 + G+ G++ Q +F I + + R F + G+ + Sbjct: 63 --RVWGRRLPDGIALTDNQRVVFKRIERLDAGRESPEPVVRIDPVTRFGQGLFTFGEHLY 120 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR-QMYYVGVSGVPVVILISFVT 178 I A + GL++ + A + + + I +Y G +P+ L++F+ Sbjct: 121 GGI------ALLGGLIV----DLLAVLRRPRTMPWTEISANVYAAGTKALPITALVAFLI 170 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G V++ A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ Sbjct: 171 GIVLSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVT 230 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE+DA+R MG+ + PR+ AL +++PLL + N A+ G ++ I F Sbjct: 231 EELDAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFV 290 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 S +AN+F GL K I +VA GF + +S SLG+ TT VV SI++VI Sbjct: 291 RSLPSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVI 350 Query: 359 IIDSLFAIFYFAIGI 373 + D++FAI + +G+ Sbjct: 351 LADAVFAILFQNVGL 365 >gi|124386096|ref|YP_001027344.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10229] gi|124294116|gb|ABN03385.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10229] Length = 428 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 105/375 (28%), Positives = 183/375 (48%), Gaps = 18/375 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 G TV R G W + ++ +V I + + DLS + +D +G + + Sbjct: 68 GSQGRTV-RLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALW-- 124 Query: 62 MEKYHGKIKLQGVSTHIEQ--LFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 + G+ G++ Q +F I + + R F + G+ + Sbjct: 125 --RVWGRRLPDGIALTDNQRVVFKRIERLDAGRESPEPVVRIDPVTRFGQGLFTFGEHLY 182 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR-QMYYVGVSGVPVVILISFVT 178 I A + GL++ + A + + + I +Y G +P+ L++F+ Sbjct: 183 GGI------ALLGGLIV----DLLAVLRRPRTMPWTEISANVYAAGTKALPITALVAFLI 232 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G V++ A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ Sbjct: 233 GIVLSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVT 292 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE+DA+R MG+ + PR+ AL +++PLL + N A+ G ++ I F Sbjct: 293 EELDAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFV 352 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 S +AN+F GL K I +VA GF + +S SLG+ TT VV SI++VI Sbjct: 353 RSLPSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVI 412 Query: 359 IIDSLFAIFYFAIGI 373 + D++FAI + +G+ Sbjct: 413 LADAVFAILFQNVGL 427 >gi|187250741|ref|YP_001875223.1| ABC transporter-like protein [Elusimicrobium minutum Pei191] gi|186970901|gb|ACC97886.1| ABC transporter related [Elusimicrobium minutum Pei191] Length = 258 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 80/261 (30%), Positives = 143/261 (54%), Gaps = 8/261 (3%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 IG++I+ F N+ C +A ++ S + +++ ++Q +G++ + V L Sbjct: 5 IGREIIIFFNE-CGKA--FNMLRSCMFWLFKAPFEWA----QAMQQSVTIGINSLTVTTL 57 Query: 174 ISFVTGAVIAQQGAFQLSQFGAE-IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 S TG V+A QG +S +E +F L+S +RE+G +LTAV++ GR+G+A+ AEI Sbjct: 58 TSIFTGMVLALQGGNTISNILSEPMFVGTLVSFSLIRELGPVLTAVVVVGRAGAAVTAEI 117 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 G+M++ E+IDA+ T+G + VR L+ PR++A ++++P+LT+ ANFS I G +V + Sbjct: 118 GTMQVTEQIDALYTLGTNPVRQLVLPRMFAFMLTVPILTLFANFSGIFGGYLVAVHGLGV 177 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 P + + + G IK+ F A +G V +G + +G+ T VV Sbjct: 178 PDVTYLEDITNYMNTLDFMHGFIKSIFFAFMVGTVCCYKGLDTKGGAEGVGRSTTIAVVT 237 Query: 353 SISIVIIIDSLFAIFYFAIGI 373 S+ +++++D A GI Sbjct: 238 SMVLILVLDYFLTAILTAFGI 258 >gi|325527206|gb|EGD04595.1| putative ABC transporter permease [Burkholderia sp. TJI49] Length = 351 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 78/215 (36%), Positives = 128/215 (59%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 +Y G +P+ L++F+ G V++ A QL FGA + ++++ + +RE+G +L+A+ Sbjct: 136 NIYSAGTQALPITALVAFLIGIVLSYLSAQQLQMFGANRYIVNILGLSVIRELGPVLSAI 195 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++AGRSGSAI A+IG M++ EE+DA+R MG+ LI PR+ AL I++PLL + N A Sbjct: 196 LVAGRSGSAITAQIGVMRVTEELDAMRVMGIPHGLRLILPRVLALGIAMPLLVMWTNIIA 255 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 + G ++ I F +AN++ G+ K I +VA GF + + Sbjct: 256 LTGGALAAKLVLGIDVNYFVRSLPGVVPIANLYIGIGKGVVFGMLIALVACHFGFRIKAN 315 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 S SLG+ TT VV SI++VI+ D++FAI + +G+ Sbjct: 316 SQSLGEGTTTSVVTSITVVILADAVFAILFQNVGL 350 >gi|223940090|ref|ZP_03631954.1| protein of unknown function DUF140 [bacterium Ellin514] gi|223891275|gb|EEF57772.1| protein of unknown function DUF140 [bacterium Ellin514] Length = 399 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 93/334 (27%), Positives = 173/334 (51%), Gaps = 15/334 (4%) Query: 42 VDLSAITEIDTIGAELIMYFMEK----YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97 V+++ +T D+ G +Y + K ++ L G+ ++ S + + ++ Sbjct: 75 VNVAPLTYSDSAGFAF-LYLLSKGCMTPQSQVSLNGLKPEYQKALQNYSMEDVQAYQGEQ 133 Query: 98 PQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLI 157 P R ++L IG ++ + + +G VIS G + ++ Sbjct: 134 PVR-------QSLMDEIGMAVIAKTLEVRQKVIFVGDVISGLGYVLTHPRWMRRN--EIV 184 Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 R G + +P+V LIS + G VIA + A ++FGA+I+ +L+ ++ +RE+ ++TA Sbjct: 185 RIFETAGANALPIVSLISLLLGLVIAFEAAQPFARFGAKIYIANLIGLIMVRELSPVMTA 244 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +++AGRSGSA AE+G+MK+NEE++A+ T+GLD +R L+ RI A ++ PLLTI + + Sbjct: 245 ILLAGRSGSAFAAELGTMKVNEELNALETIGLDPMRFLVVQRILASLLLTPLLTIYSMAT 304 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 ++G +V+ P ++ + + S+ + +I G++KA + A G Sbjct: 305 GVLGGVLVMLG-LGFPLSIAWHQLQSSVRINDIAFGILKAFVFGGIVAGTACLRGLETKS 363 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 ++G+ T VV I ++II DS+FAI F + Sbjct: 364 GPAAVGESTTRSVVSGILLIIIADSVFAILKFVL 397 >gi|114328116|ref|YP_745273.1| ABC transporter permease [Granulibacter bethesdensis CGDNIH1] gi|114316290|gb|ABI62350.1| ABC transporter permease protein [Granulibacter bethesdensis CGDNIH1] Length = 392 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 73/218 (33%), Positives = 125/218 (57%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+R + G S + +V +++F+ G+++A GA QL +F A+I+ +L+ + +RE+ ++ Sbjct: 175 LLRDISDAGPSALLIVGIVNFLMGSILAFVGAVQLRKFAADIYVANLVGLASVREMSAVM 234 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA+++AGR+G A A I +M NEEIDA+R G+ R L+ P I AL++++P+L + A Sbjct: 235 TAIIMAGRTGGAYAARIATMTGNEEIDALRVFGIPVSRYLLLPSIAALVLTMPILYLYAC 294 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 +++G IV D+ A F++ + + G +K A IG+V+ + G Sbjct: 295 LISLVGGYIVSQGMLDVTMAGFWNHLFGSVHIDQFVFGFVKTITFAMLIGLVSCRIGLKA 354 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 G + +G T VV I VI +DS+FA+ IGI Sbjct: 355 GRSAADVGVAATRAVVSGIVGVIALDSMFAVLATIIGI 392 >gi|295675321|ref|YP_003603845.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1002] gi|295435164|gb|ADG14334.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1002] Length = 389 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 108/382 (28%), Positives = 186/382 (48%), Gaps = 40/382 (10%) Query: 8 VFRFAGNWKSPEISEIADDV-VMAINKSIQSDSAI--VDLSAITEIDTIGAE-LIMYFME 63 + R +G W + ++ D V+ +S+ I DLS + +D +G + L + Sbjct: 31 IVRLSGQWTALALARDRDTGHVIPQLRSLTGAQGIGGWDLSRVDSMDHVGGQALWRVWGR 90 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 K L I + +L+ ++ +P F + F L G I F+ Sbjct: 91 KLPPGTALTDTQRDIFERIALLDTVR----ESAEPVTRF--DPFTRL----GLGIFSFVE 140 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ------------MYYVGVSGVPVV 171 +LG V+ + LL+++R+ +Y G +P+ Sbjct: 141 HMQGGVAMLGRVVLD--------------LLAILRKPKLTPWTEISANIYNAGARALPIT 186 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 L++F+ G V++ A QL FGA F ++++ + +RE+G +L+A+++AGRSGSAI A+ Sbjct: 187 ALVAFLIGIVLSYLSAQQLRIFGANQFIVNILGLAVIRELGPVLSAILVAGRSGSAITAQ 246 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 IG M++ EE+DA+R MG+ LI PR+ AL +++PLL + N ++ G ++ Sbjct: 247 IGVMRVTEELDAMRVMGIPHGLRLILPRVIALAVAMPLLVMWTNVISLTGGALAAKLVLG 306 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 I + F + +AN++ GL K I I GF + +S SLG+ TT VV Sbjct: 307 IDMSFFARQLPVVVPIANLWIGLGKGAVFGMLIAIAGCHFGFRIKANSQSLGEGTTTSVV 366 Query: 352 QSISIVIIIDSLFAIFYFAIGI 373 SI+IVI+ D++FAI + +G+ Sbjct: 367 TSITIVILADAVFAILFQNVGL 388 >gi|91781621|ref|YP_556827.1| ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91685575|gb|ABE28775.1| Putative ABC transporter, inner membrane subunit [Burkholderia xenovorans LB400] Length = 377 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 79/215 (36%), Positives = 128/215 (59%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 +Y G +P+ L++F+ G V++ A QL FGA + ++++ + +RE+G +L+A+ Sbjct: 162 NVYNAGTQALPITALVAFLIGIVLSYLSAQQLRLFGANQYIVNILGLSVIRELGPVLSAI 221 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++AGRSGSAI A+IG M++ EE+DA+R MG+ LI PR+ AL +++PLL + N A Sbjct: 222 LVAGRSGSAITAQIGVMRVTEELDAMRVMGIPHGLRLILPRVLALGVAMPLLVMWTNIIA 281 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 + G ++ I + F +AN++ GL K I IV GF + + Sbjct: 282 LTGGALAARIVLGIDMSYFARALPGVVPVANLWIGLGKGVVFGMLIAIVGCHFGFRIKAN 341 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 S SLG+ TT VV SI+IVI+ D++FAI + +G+ Sbjct: 342 SQSLGEGTTTSVVTSITIVILADAVFAILFQNVGL 376 >gi|296160361|ref|ZP_06843178.1| protein of unknown function DUF140 [Burkholderia sp. Ch1-1] gi|295889342|gb|EFG69143.1| protein of unknown function DUF140 [Burkholderia sp. Ch1-1] Length = 377 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 79/215 (36%), Positives = 128/215 (59%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 +Y G +P+ L++F+ G V++ A QL FGA + ++++ + +RE+G +L+A+ Sbjct: 162 NVYNAGTQALPITALVAFLIGIVLSYLSAQQLRLFGANQYIVNILGLSVIRELGPVLSAI 221 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++AGRSGSAI A+IG M++ EE+DA+R MG+ LI PR+ AL +++PLL + N A Sbjct: 222 LVAGRSGSAITAQIGVMRVTEELDAMRVMGIPHGLRLILPRVLALGVAMPLLVMWTNIIA 281 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 + G ++ I + F +AN++ GL K I IV GF + + Sbjct: 282 LTGGALAAKIVLGIDMSYFARALPGVVPVANLWIGLGKGVVFGMLIAIVGCHFGFRIKAN 341 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 S SLG+ TT VV SI+IVI+ D++FAI + +G+ Sbjct: 342 SQSLGEGTTTSVVTSITIVILADAVFAILFQNVGL 376 >gi|167561346|ref|ZP_02354262.1| ABC transporter, permease protein [Burkholderia oklahomensis EO147] gi|167568578|ref|ZP_02361452.1| ABC transporter, permease protein [Burkholderia oklahomensis C6786] Length = 374 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 100/376 (26%), Positives = 181/376 (48%), Gaps = 35/376 (9%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 R G W + ++ +V I + + DLS + +D +G + + + G+ Sbjct: 21 RLYGQWTALALARDRGNVARRIARLAKEPVGEWDLSGVVRLDHVGGQALW----RVWGRR 76 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 +G++ Q ++ R + P+ + G+ + F Sbjct: 77 LPEGLALTDNQ-RTVFERIERLDEGREAPEPVVRIDPIT----RFGQGLFTFGEHLYGGI 131 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQ------------MYYVGVSGVPVVILISFV 177 +LG ++ + LLS++R+ +Y G +P+ L++F+ Sbjct: 132 GLLGRLVID--------------LLSVLRRPRTMPWTEISANVYAAGAKALPITALVAFL 177 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V++ A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ Sbjct: 178 IGIVLSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRV 237 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EE+DA+R MG+ + PR+ AL +++PLL + N A+ G ++ I F Sbjct: 238 TEELDAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLAIDLNFF 297 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 S +AN++ GL K I +VA GF + +S SLG+ TT VV SI++V Sbjct: 298 VRSLPSVVPIANLWIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVV 357 Query: 358 IIIDSLFAIFYFAIGI 373 I+ D++FAI + +G+ Sbjct: 358 ILADAVFAILFQNVGL 373 >gi|167835250|ref|ZP_02462133.1| ABC transporter, permease protein [Burkholderia thailandensis MSMB43] Length = 281 Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 78/215 (36%), Positives = 128/215 (59%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 +Y G +P+ L++F+ G V++ A QL FGA + ++++ + +RE+G +L+A+ Sbjct: 66 NVYAAGAKALPITALVAFLIGIVLSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAI 125 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++AGRSGSAI A+IG M++ EE+DA+R MG+ + PR+ AL +++PLL + N A Sbjct: 126 LVAGRSGSAITAQIGVMRVTEELDAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIA 185 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 + G ++ I F S +AN+F GL K I +VA GF + + Sbjct: 186 LTGGALAAKFVLGIDLNFFVRSLPSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKAN 245 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 S SLG+ TT VV SI++VI+ D++FAI + +G+ Sbjct: 246 SQSLGEGTTTSVVTSITVVILADAVFAILFQNVGL 280 >gi|85858103|ref|YP_460305.1| organic solvents resistance ABC transporter permease [Syntrophus aciditrophicus SB] gi|85721194|gb|ABC76137.1| ABC-type transport system involved in resistance to organic solvents, permease component [Syntrophus aciditrophicus SB] Length = 284 Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 86/280 (30%), Positives = 147/280 (52%), Gaps = 17/280 (6%) Query: 90 RKKIKNQKPQRSFFYNSFKNLHY---HIGKKIVKFINDSCSQAHILGLVISNTGEFCASS 146 R I+ +++ +N+ + L + +G+ ++ +IN+S G Sbjct: 6 RPDIQESSEEKAG-WNAIRLLSWPFAQLGRSVISWINNS-------GAAAIFLLLAALKI 57 Query: 147 YKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206 ++ + L+ + +Q+YY+G +++L+ TG V+ Q L Q GAE L+++ Sbjct: 58 FRPRQ-LMKITQQIYYIGARSTMIIMLVGLFTGMVLGLQSYHALVQVGAEGALGTLVALS 116 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 +RE+G +LTA+MI R+GSAI A+IG +I+E+IDA+ TM +D +R LISPRI A IIS Sbjct: 117 LIRELGPVLTAIMITARAGSAITAQIGIERISEQIDALDTMHIDPLRYLISPRIAAAIIS 176 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326 P+LT L + I+G+ I FF R S+ ++++ G IKA A + Sbjct: 177 FPVLTALFDLIGILGSYISGVLIMGANAGTFFHRVQSSVEMSDVNEGFIKAIVFAVIVST 236 Query: 327 VAMKEGFAVGVHSNSLGKK-----VTTCVVQSISIVIIID 361 V +G+ + +S G K T+ VV S ++++ D Sbjct: 237 VCCYQGYFAHMRPDSHGAKAVGLSTTSAVVLSCVLILVSD 276 >gi|187922498|ref|YP_001894140.1| hypothetical protein Bphyt_0491 [Burkholderia phytofirmans PsJN] gi|187713692|gb|ACD14916.1| protein of unknown function DUF140 [Burkholderia phytofirmans PsJN] Length = 377 Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 109/371 (29%), Positives = 183/371 (49%), Gaps = 18/371 (4%) Query: 8 VFRFAGNWKSPEIS-EIADDVVMAINKSIQSDSAI--VDLSAITEIDTIGAE-LIMYFME 63 + R +G W + ++ + A V+ + +S+ I DLS I +D +G + L + Sbjct: 19 IVRLSGQWTALALARDRATGHVIPLLRSLVGAEGIGQWDLSRIDRMDHVGGQALWRVWGH 78 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 K L I + +L+ +K + ++ L G I F Sbjct: 79 KMPPDTTLTDTQRDIFERIALLDTVR------EKAEPVIRFDPLTRL----GLAIFSFFE 128 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR-QMYYVGVSGVPVVILISFVTGAVI 182 +LG V+ + A + K K + I +Y G +P+ L++F+ G V+ Sbjct: 129 HLYGGVAMLGRVVL---DLLAIARKPKITPWTEISANIYNAGTKALPITALVAFLIGIVL 185 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + A QL FGA + ++++ + +RE+G +L A+++AGRSGSAI A+IG M++ EE+D Sbjct: 186 SYLSAQQLRLFGANQYIVNILGLSVIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELD 245 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R MG+ LI PR+ AL +++PLL + N A+ G ++ I + F Sbjct: 246 AMRVMGIPHGLRLILPRVVALGVAMPLLVMWTNIIALTGGALAAKIALGIDMSYFARALP 305 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 +AN++ GL K I IV GF + +S SLG+ TT VV SI+IVI+ D+ Sbjct: 306 GVVPVANLWIGLGKGVAFGMLIAIVGCHFGFRIKANSQSLGEGTTTSVVTSITIVILADA 365 Query: 363 LFAIFYFAIGI 373 +FAI + +G+ Sbjct: 366 VFAILFQNVGL 376 >gi|239906932|ref|YP_002953673.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1] gi|239796798|dbj|BAH75787.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1] Length = 269 Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 71/217 (32%), Positives = 125/217 (57%), Gaps = 5/217 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +++Q+Y++GV + V+ LI TG V+ QG + L +FG+E +++ +RE+G +L Sbjct: 51 IVQQVYFIGVKSIFVIALIGLFTGMVLGLQGYYTLVKFGSEGLLGAAVALSIIRELGPVL 110 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA+MI GR+GS++ AE+G M+I+E+IDA+ TM ++ +R L++PR+ A +I PLLT + + Sbjct: 111 TAIMITGRAGSSMAAELGIMRISEQIDALSTMDINPMRFLVAPRLAASLICFPLLTAIFD 170 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I+G + I V+F R +T LA++ G +K+ A + ++ EG+ Sbjct: 171 VVGILGGYLSGCVLLGINPGVYFDRIDATVELADVTGGFVKSVVFALLVAVICCYEGYFT 230 Query: 336 GVHSNSLGKK-----VTTCVVQSISIVIIIDSLFAIF 367 G K T+ VV S ++++ D + F Sbjct: 231 HARQGGFGAKGVSLATTSAVVLSCVVILVADYVLTSF 267 >gi|330822969|ref|YP_004386272.1| hypothetical protein Alide2_0328 [Alicycliphilus denitrificans K601] gi|329308341|gb|AEB82756.1| protein of unknown function DUF140 [Alicycliphilus denitrificans K601] Length = 372 Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 71/214 (33%), Positives = 125/214 (58%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 +Y +G + + L+ F+ G V+A + QL QFGAE F ++++ I +RE+G +L A+ Sbjct: 158 HVYQMGAKALHITALVGFLIGVVLAYLMSLQLRQFGAEAFIVNILGISLIRELGPMLGAI 217 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++AGRSGSAI A+IG M++ EE+DA+R MG+ L+ PR AL +++PL+ + +A Sbjct: 218 LVAGRSGSAITAQIGVMRVTEELDAMRVMGIAHGFRLVMPRALALGLAMPLIALWTTLAA 277 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 + G + I A F + ++N++ + K+ I ++ G V + Sbjct: 278 LAGGMLAADLTMGISSAYFLQALPAAVKVSNLWLAMAKSVVFGVFIALIGCHWGLRVKPN 337 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 + SLG+ T VV +I++VI++D+LFA+ + +G Sbjct: 338 TQSLGEGTTASVVSAITMVIVVDALFAVAFKNLG 371 >gi|121607910|ref|YP_995717.1| hypothetical protein Veis_0920 [Verminephrobacter eiseniae EF01-2] gi|121552550|gb|ABM56699.1| protein of unknown function DUF140 [Verminephrobacter eiseniae EF01-2] Length = 374 Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 97/365 (26%), Positives = 181/365 (49%), Gaps = 17/365 (4%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIV----DLSAITEIDTIGAELIMYFMEKYHGK 68 G W + E+ A A++ ++ A+ DL A+ +D +GA+L+ ++ + Sbjct: 23 GRWGAAELGNAAQ--WQALSGQLRKHPAVPTLGWDLRALQWLDHVGAQLLWNHWQRAWPQ 80 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 +L + L + F+ P + + + H+G ++ + + Sbjct: 81 -QLACTDSQRSMLARVAQFS-----TTAPPPAPWRLAAQVD---HLGLLVLHGVEHARHI 131 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +LG ++ + + + G + +Y +G + +P+ L+ F+ G V+A + Sbjct: 132 LEMLGQLVLDLARLARAPRR--GPWRDVSGHLYRMGATALPITALVGFLIGVVLAYLMSL 189 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 QL QFGAE F ++++ I +RE+G +L A+++AGRSGSAI A+IG M++ EE+DA+R MG Sbjct: 190 QLRQFGAESFIVNILGISLIRELGPMLAAILVAGRSGSAITAQIGVMRVTEELDAMRVMG 249 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + L+ PR AL +++PLL++ +A+ G + I A F + Sbjct: 250 IAHGFRLVLPRTLALALAMPLLSLWTTLAALAGGMLAADLTMGISPAYFAQALPAAVRPG 309 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 N+ + K+ I ++ G V + SLG+ T VV +I++VI++D+LFA+ + Sbjct: 310 NLGLAMAKSVVFGAGIALIGCHWGLRVRPDTQSLGEGTTASVVSAITMVIVVDALFAVTF 369 Query: 369 FAIGI 373 IGI Sbjct: 370 KTIGI 374 >gi|319761111|ref|YP_004125048.1| hypothetical protein Alide_0383 [Alicycliphilus denitrificans BC] gi|317115672|gb|ADU98160.1| protein of unknown function DUF140 [Alicycliphilus denitrificans BC] Length = 388 Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 71/214 (33%), Positives = 125/214 (58%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 +Y +G + + L+ F+ G V+A + QL QFGAE F ++++ I +RE+G +L A+ Sbjct: 174 HVYQMGAKALHITALVGFLIGVVLAYLMSLQLRQFGAEAFIVNILGISLIRELGPMLGAI 233 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++AGRSGSAI A+IG M++ EE+DA+R MG+ L+ PR AL +++PL+ + +A Sbjct: 234 LVAGRSGSAITAQIGVMRVTEELDAMRVMGIAHGFRLVMPRALALGLAMPLIALWTTLAA 293 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 + G + I A F + ++N++ + K+ I ++ G V + Sbjct: 294 LAGGMLAADLTMGISSAYFLQALPAAVKVSNLWLAMAKSVVFGVFIALIGCHWGLRVKPN 353 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 + SLG+ T VV +I++VI++D+LFA+ + +G Sbjct: 354 TQSLGEGTTASVVSAITMVIVVDALFAVAFKNLG 387 >gi|307728301|ref|YP_003905525.1| hypothetical protein BC1003_0230 [Burkholderia sp. CCGE1003] gi|307582836|gb|ADN56234.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1003] Length = 389 Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 79/215 (36%), Positives = 128/215 (59%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 +Y G +P+ L++F+ G V++ A QL FGA + ++++ + +RE+G +L+A+ Sbjct: 174 NIYNAGTRALPITALVAFLIGIVLSYLSAQQLRLFGANQYIVNILGLSVIRELGPVLSAI 233 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++AGRSGSAI A+IG M++ EE+DA+R MG+ LI PR+ AL +++PLL + N A Sbjct: 234 LVAGRSGSAITAQIGVMRVTEELDAMRVMGIPHGLRLILPRVVALGVAMPLLVMWTNIIA 293 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 + G ++ I + F +AN++ GL K I IV GF + + Sbjct: 294 LTGGAVAAKIVLGIDMSYFARALPGVVPVANLWIGLGKGVAFGMLIAIVGCHFGFRIKAN 353 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 S SLG+ TT VV SI+IVI+ D++FAI + +G+ Sbjct: 354 SQSLGEGTTTSVVTSITIVILADAVFAILFQNVGL 388 >gi|258404804|ref|YP_003197546.1| hypothetical protein Dret_0676 [Desulfohalobium retbaense DSM 5692] gi|257797031|gb|ACV67968.1| protein of unknown function DUF140 [Desulfohalobium retbaense DSM 5692] Length = 256 Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 76/256 (29%), Positives = 137/256 (53%), Gaps = 7/256 (2%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 +G ++ + A +LG S G ++ + F +QM +VGV VVIL Sbjct: 8 LGAGTMRGLQQMGQMALLLG---SACGWLLRRPFRIRLFF----KQMEFVGVHSGFVVIL 60 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 TG V+A Q + F AE +++ RE+G ++TA+M+ GR+GSA+ AEIG Sbjct: 61 TGLFTGMVLALQTYYAFRMFSAESLVGATVALSMTRELGPVITALMVTGRAGSAMAAEIG 120 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 +M++ E++DA+ M ++ V+ L++PR+ A ++ LPLLT++++F I G +V K I Sbjct: 121 TMRVTEQVDALEVMAINPVQYLVTPRLLAGMVMLPLLTVISDFVGIAGGYLVGVKMLGIN 180 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 ++F ++ + L++I+ GL KA + +V +GF + +G+ T VV + Sbjct: 181 SSMFMNKIYDLLELSDIYNGLTKAVVFGLILTLVGCYKGFYTSGGAEGVGRSTTQAVVLA 240 Query: 354 ISIVIIIDSLFAIFYF 369 ++++ D + F Sbjct: 241 SVLILMSDYILTALMF 256 >gi|283853085|ref|ZP_06370341.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B] gi|283571552|gb|EFC19556.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B] Length = 274 Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 74/217 (34%), Positives = 123/217 (56%), Gaps = 5/217 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +++Q+Y++GV V V++LI TG V+ QG + L +FG+E +++ +RE+G +L Sbjct: 56 IVQQVYFIGVKSVFVIVLIGLFTGMVLGLQGYYTLVKFGSEGLLGAAVALSIIRELGPVL 115 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA+MI GR+GS++ AEIG M+I+E+IDA+ TMG++ +R LI+PR+ A ++ PLLT + + Sbjct: 116 TAIMITGRAGSSMAAEIGIMRISEQIDALSTMGINPLRFLIAPRLAASLVCFPLLTAIFD 175 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I G + I V+F R ST L ++ G +K+ A + + EG+ Sbjct: 176 VVGIGGGYLTGVVLLGINPGVYFDRIDSTVELGDVTGGFVKSLVFALLVAAICCFEGYFT 235 Query: 336 GVHSNSLGKK-----VTTCVVQSISIVIIIDSLFAIF 367 G K T+ VV S +++ D + F Sbjct: 236 HTRREGFGAKGVSLATTSAVVLSCITILVADYVLTSF 272 >gi|315122739|ref|YP_004063228.1| ABC transporter [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496141|gb|ADR52740.1| ABC transporter [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 147 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 58/102 (56%), Positives = 76/102 (74%), Gaps = 1/102 (0%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 SENG+ VFR G+W+S EIS+I+ +++ INKS Q D AIVDL ITEIDTIG I+YF Sbjct: 18 SENGVKVFRLTGSWRSAEISKISKGILITINKSTQEDLAIVDLLEITEIDTIGVATIIYF 77 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFF 103 EKY GKI+LQG++ H+EQLFS++S K+K QK Q+ +F Sbjct: 78 TEKYRGKIQLQGMTAHMEQLFSIMSLNPNNKLK-QKNQKIYF 118 >gi|283852492|ref|ZP_06369760.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B] gi|283572100|gb|EFC20092.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B] Length = 256 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 68/206 (33%), Positives = 118/206 (57%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 M ++G +P++ +IS G ++A Q A QL + GA + +L+ + E+G LLT + Sbjct: 43 HMAWIGADSLPIISIISACVGIILALQAATQLEKVGALSYVANLVGFSIITELGPLLTCL 102 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++AGR+G+A AEI +M+I+EEIDA+ MGLD VR L+ P+ A+ + PLLT+ + Sbjct: 103 ILAGRAGAAFTAEIATMQISEEIDALEVMGLDPVRFLVWPKFLAMCVMAPLLTLWGDAVG 162 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 I + + + +F + T+ ++ GL+K+ AI IV+ +GF Sbjct: 163 ITAGGVFSALFLGLAGKAYFLQTAHFLTMRDLLAGLVKSAGFGVAITIVSCWQGFLAKEG 222 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLF 364 + +G++ T VV+SI ++I++D F Sbjct: 223 AADVGRRTTKAVVESIFLMILLDLFF 248 >gi|288817534|ref|YP_003431881.1| ABC transporter permease protein [Hydrogenobacter thermophilus TK-6] gi|288786933|dbj|BAI68680.1| ABC transporter permease protein [Hydrogenobacter thermophilus TK-6] gi|308751137|gb|ADO44620.1| protein of unknown function DUF140 [Hydrogenobacter thermophilus TK-6] Length = 245 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 72/209 (34%), Positives = 116/209 (55%) Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 L I Q+ Y+G VPVV++ S +G VIA Q +F AE +++I RE+G Sbjct: 29 LRHFISQLAYLGAETVPVVVITSIFSGGVIALQTYSTFHRFNAEFLIGAVVAISMGRELG 88 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 +L ++M+ R GSA+ A IG+M+I E+IDA+ MG++ V L+SPR++A ++ +P+L I Sbjct: 89 PVLASLMVVARVGSAMTASIGTMRITEQIDALEVMGINPVSYLVSPRVFAGVLGVPMLVI 148 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 LA+ + + G V K + + +F+ + A + GL KA F I V+ G Sbjct: 149 LADIAGVFGGWFVAVKLFGVNEYLFWEKMRDIAEFYDFIGGLYKAVFFGLIISAVSCYFG 208 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIID 361 F G + +G+ T VV S +++I D Sbjct: 209 FYTGGGTEGVGRATTNSVVVSSMLILISD 237 >gi|116749843|ref|YP_846530.1| hypothetical protein Sfum_2414 [Syntrophobacter fumaroxidans MPOB] gi|116698907|gb|ABK18095.1| protein of unknown function DUF140 [Syntrophobacter fumaroxidans MPOB] Length = 384 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 103/379 (27%), Positives = 185/379 (48%), Gaps = 42/379 (11%) Query: 13 GNWKSPEISEIADDV--VMAINKSIQSDSAIVDLSAIT-EIDTIGAELIMYFMEKYHGKI 69 GNW+ IAD+ V AI + +SD I L+ T E+ + L+ + ++ + Sbjct: 30 GNWR------IADEPIPVDAIIREFESDPRIRILAFDTGELGEWDSSLLTFLIKVIDTGV 83 Query: 70 KL------QGVSTHIEQLFSLIS-FTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + G+ + +L SL S + Q+ ++ F +G + + Sbjct: 84 RRGLEADRTGLPEGVGRLLSLASAVPEATDARRQEAKQPFLT--------RVGTQAI--- 132 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKF-KGF-------LLSLIRQMYYVGVSGVPVVILI 174 S A +G ++ GE + ++ +G L++LI+ G +P+V LI Sbjct: 133 ----SLAAAVGQMMEFLGEAAIAFFQLVRGRARLRRVDLMTLIQD---CGADALPIVSLI 185 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 S + G ++A GA QL FGA+I+ DL+ + RE+G ++TAV++AGR+G+A A++G+ Sbjct: 186 SVLVGLILAFVGAVQLRMFGAQIYVADLVGLGMAREMGAMMTAVIMAGRTGAAFAAQLGT 245 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 M++NEEIDA++T+G+ + L+ PR+ AL++ +P L + A+ I+G IV + Sbjct: 246 MQVNEEIDALQTLGVSPMEFLVLPRMLALVLMMPFLCLYADLMGILGGGIVGVGMLGLSP 305 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 ++ L + GLIK I + G G S ++G T+ VV I Sbjct: 306 LEYYHETVQAVGLMDFGAGLIKGAVFGVLIALSGCLRGMQCGRSSAAVGLATTSAVVTGI 365 Query: 355 SIVIIIDSLFAIFYFAIGI 373 +++ D++ + Y +GI Sbjct: 366 VAIVVSDAILTVIYDRLGI 384 >gi|251771480|gb|EES52057.1| putative integral membrane protein [Leptospirillum ferrodiazotrophum] Length = 253 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 66/212 (31%), Positives = 120/212 (56%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 Q+ +G VV++ +F TG V+A Q +F AE ++++ RE+G ++T+ Sbjct: 42 EQLLRIGADSTLVVVVTAFFTGMVLALQAWIGFRKFNAEGLVGAVVTLSMTRELGPVITS 101 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +M+ GRSGSA+ AE+GSM+++E+IDA+ T+ +D V L++PR++A +++LPLLT LA+ Sbjct: 102 LMVTGRSGSAMAAELGSMRVSEQIDALETLAVDPVDYLVTPRLYASLVALPLLTALADLV 161 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 I G +V K + ++F L + +G++K+ F + + A + GF Sbjct: 162 GIGGGYVVAVKLLGLSPHLYFQEISHYVDLHDFISGIVKSVFFGGLLALWACRTGFVASG 221 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+ VT VV ++++D + F Sbjct: 222 GAAGVGRAVTFAVVSGSMSILVVDYFLTAWLF 253 >gi|78222485|ref|YP_384232.1| hypothetical protein Gmet_1271 [Geobacter metallireducens GS-15] gi|78193740|gb|ABB31507.1| protein of unknown function DUF140 [Geobacter metallireducens GS-15] Length = 255 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 74/254 (29%), Positives = 139/254 (54%), Gaps = 15/254 (5%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGF---LLSLIRQMYYVGVSGVP 169 +GK+++ F N+ + +L C + + F+ +LS+ QM +G +P Sbjct: 4 RVGKRVIAF-NEIVGEMVML---------LCQTVWFFREAPRNILSIFTQMSIIGYETLP 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 + +++F G V+A Q +L ++G + ++ + +RE+G ++T+ ++AGR+GSA+ Sbjct: 54 MASVMAFFVGMVLALQTGAELQKYGTQNIIGGIVGLSMVRELGPVMTSFLVAGRAGSAMA 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV--IW 287 AEIG MK+ EEIDA++T+ ++ VR L PR+ A +I +P L I A+F I+G +++ + Sbjct: 114 AEIGVMKVYEEIDALKTLDINPVRYLAMPRLIACLICVPALVIYADFVGILGGALLSHLH 173 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 I ++ ++ ++ L I GL+KA C IG+V+ GF + + + T Sbjct: 174 PKIFISYSTYYDSLNTALKLKEIGAGLLKATVFGCIIGVVSCYTGFKTTGGARGIAQSTT 233 Query: 348 TCVVQSISIVIIID 361 VV S +++ D Sbjct: 234 RAVVLSFMLILAAD 247 >gi|83594240|ref|YP_427992.1| hypothetical protein Rru_A2908 [Rhodospirillum rubrum ATCC 11170] gi|83577154|gb|ABC23705.1| Protein of unknown function DUF140 [Rhodospirillum rubrum ATCC 11170] Length = 275 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 76/221 (34%), Positives = 131/221 (59%), Gaps = 3/221 (1%) Query: 148 KFKG---FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204 +F+G L +++ Q +G+ +P+V++++F G ++A QG + L FGAE + ++ Sbjct: 50 RFRGQPVRLGAIVEQAMEMGIRALPIVLVMNFTIGMMLAIQGIYSLRMFGAEQQVVLGVA 109 Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264 +RE L+T +++AGRSGSAI A +G+M IN+EIDA+ MG+ VR L++P + A + Sbjct: 110 FSVVREFAPLITGILVAGRSGSAIAARLGTMTINQEIDALTVMGIVPVRYLVAPPLIAAL 169 Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI 324 + +PL+T L A++GAS+ + + + FF + L ++ GL K+ A I Sbjct: 170 VMVPLMTFLGMLVALLGASLTVRIDLGMSLSAFFHQTLDILRLIDLTHGLGKSALFALQI 229 Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 +V + G +V + +GK T VVQ+IS +I+ D +FA Sbjct: 230 VLVGVVNGVSVSGGAEGVGKMTTRSVVQAISAIIVTDMVFA 270 >gi|320107063|ref|YP_004182653.1| hypothetical protein AciPR4_1853 [Terriglobus saanensis SP1PR4] gi|319925584|gb|ADV82659.1| protein of unknown function DUF140 [Terriglobus saanensis SP1PR4] Length = 259 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 75/215 (34%), Positives = 119/215 (55%), Gaps = 2/215 (0%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 QM +G +P+VIL F TG V+A Q A L QFGA + L+++ ++E+G +LT + Sbjct: 44 QMDSIGFGSLPIVILAGFFTGCVLALQSATALQQFGAVSKTGSLVALSMVKELGPVLTGL 103 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 M++GR+ S I +E+GSM++ E+IDA+R +G D VR L+ PRI A +I L L+IL+ Sbjct: 104 MVSGRNASGIASELGSMRVTEQIDAMRALGTDPVRKLVLPRIAATVIMLAFLSILSAAMG 163 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 I G ++V + + +F +++ ++ GL+K F I V G Sbjct: 164 IAGGALVSVALLGLNSSAYFHSSYASLVYGDVVQGLVKPVFFGFIIASVGCYFGMTTKGG 223 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + +GK T VV S +I++D F + IGI Sbjct: 224 TQGVGKSTTQAVVISSVCIIVVD--FLLTRLMIGI 256 >gi|296532685|ref|ZP_06895378.1| ABC superfamily ATP binding cassette transporter, ABC protein [Roseomonas cervicalis ATCC 49957] gi|296266987|gb|EFH12919.1| ABC superfamily ATP binding cassette transporter, ABC protein [Roseomonas cervicalis ATCC 49957] Length = 278 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 79/259 (30%), Positives = 140/259 (54%), Gaps = 3/259 (1%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 IG V + D + LG + T + + + L+R + G+ P+ +L Sbjct: 22 IGAWAVAVLRDVRAATGFLGEAVVMTLSLLPRPRRLR--VGDLLRHLDEAGLRAFPLTLL 79 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 + + G ++A Q + + Q+GAEI+ L+ I LRE+G L+ A+++AGR+GSA AE+G Sbjct: 80 LGLLIGVILAFQSSIPMRQYGAEIYIPSLVGISLLRELGPLIAAIILAGRTGSAFAAELG 139 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 +M +NEE+DA+R MG+D + +L+ PR+ A ++ +P+LT+L N S +IG V+ P Sbjct: 140 TMTVNEEVDALRIMGIDPMVMLVLPRLIAAMLVMPVLTLLMNLSGLIGMGTVM-GALGFP 198 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 A+ ++ TL + GL K+ + + + G + G ++G T VV Sbjct: 199 AALVINQLSYWLTLGTLLGGLGKSVVFGLVVAGIGCRAGLSAGRGPRAVGDAATAAVVGG 258 Query: 354 ISIVIIIDSLFAIFYFAIG 372 I +++D LFA+ ++ +G Sbjct: 259 IVSTVVLDGLFAVLFYRLG 277 >gi|308272145|emb|CBX28752.1| UPF0393 membrane protein RBE_1340 [uncultured Desulfobacterium sp.] Length = 288 Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 74/211 (35%), Positives = 121/211 (57%), Gaps = 5/211 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +++Q++++G V V+ L TG V+ QG L +FG+ F ++++ +RE+G +L Sbjct: 70 ILQQIHFIGSKSVFVICLTGAFTGMVLGLQGYHTLVKFGSAGFLGAVVALSLIRELGPVL 129 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A+M+ GR+GSAI AE+G M+I+EEIDA+ TM ++ +R L+SP++ A +IS+PLLT L + Sbjct: 130 AAIMVTGRAGSAIAAEVGIMRISEEIDALDTMDINPLRFLVSPKLAAALISMPLLTALFD 189 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 IIG I I ++FSR ++ +A++ G IK+ A I V +G+ Sbjct: 190 VVGIIGGYISGSLLLGISGGIYFSRIETSVEMADVTGGFIKSLVFAAVIVTVCCFQGYYT 249 Query: 336 GVHSNSLGKK-----VTTCVVQSISIVIIID 361 G K T+ VV S ++I D Sbjct: 250 HTRKEGFGAKGVSLSTTSAVVISCVTILITD 280 >gi|149200416|ref|ZP_01877432.1| ABC-type transport system, permease component [Lentisphaera araneosa HTCC2155] gi|149136485|gb|EDM24922.1| ABC-type transport system, permease component [Lentisphaera araneosa HTCC2155] Length = 265 Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 78/261 (29%), Positives = 134/261 (51%), Gaps = 2/261 (0%) Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167 KNL G+ V F +S + +G V + +K K S + M G Sbjct: 2 KNLVSSFGRNFVGFFQESKNILAFIGEVTEELIFGIRNPHKIK--WKSTLYYMDGCGREA 59 Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +V LI F+ G ++ Q A Q+ QFG +I+ +L+ + ++E+G L+ A++ GR+GSA Sbjct: 60 TGIVALICFLMGLILGFQSAVQMKQFGTDIYVANLVGLSIVKELGPLMVAMIATGRAGSA 119 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 AE+G+M++NEEIDA+ TMG R LI P++ A+++ +P+LT++ + I+G V Sbjct: 120 FAAELGTMRVNEEIDALTTMGFVPPRFLIIPKLIAMMVVMPILTLIGDLLGILGGFFVGV 179 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 +PF + ++ ++ + KA A I +V G + +GK T Sbjct: 180 VQLKLPFIAYLNQTIKAIHYLDVMESMAKAFAFAIIISMVGCYRGMNSSSDAQGVGKAAT 239 Query: 348 TCVVQSISIVIIIDSLFAIFY 368 + VV I ++I+ D+L I + Sbjct: 240 SSVVSGIFLIIVADTLMTIIF 260 >gi|170691590|ref|ZP_02882755.1| protein of unknown function DUF140 [Burkholderia graminis C4D1M] gi|170143795|gb|EDT11958.1| protein of unknown function DUF140 [Burkholderia graminis C4D1M] Length = 389 Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 77/215 (35%), Positives = 127/215 (59%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 +Y G +P+ L++F+ G V++ A QL FGA + ++++ + +RE+G +L+A+ Sbjct: 174 NIYNAGTKALPITALVAFLIGIVLSYLSAQQLRLFGANQYIVNILGLSVIRELGPVLSAI 233 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++AGRSGSAI A+IG M++ EE+DA+R MG+ LI PR+ AL +++PLL + + A Sbjct: 234 LVAGRSGSAITAQIGVMRVTEELDAMRVMGIPHGLRLILPRVIALGVAMPLLVMWTDIIA 293 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 + G ++ I + F +AN++ GL K I I GF + + Sbjct: 294 LTGGAVAAKIVLGIDMSYFARALPGVVPVANLWIGLGKGVAFGMLIAIAGCHFGFRIKAN 353 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 S SLG+ TT VV SI+IVI+ D++FAI + +G+ Sbjct: 354 SQSLGEGTTTSVVTSITIVILADAVFAILFQNVGL 388 >gi|189426230|ref|YP_001953407.1| hypothetical protein Glov_3181 [Geobacter lovleyi SZ] gi|189422489|gb|ACD96887.1| protein of unknown function DUF140 [Geobacter lovleyi SZ] Length = 261 Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 69/230 (30%), Positives = 130/230 (56%), Gaps = 4/230 (1%) Query: 136 ISNTGEFCA----SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 + N G+F S + G + +++Q+ ++G + V++L + TG V+ QG + L+ Sbjct: 24 LGNCGQFLVYALYSILRRPGRPVHILKQVSFIGAKSLFVIVLTAAFTGMVLGLQGYYTLT 83 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 +FG+E +++ +RE+G +L+A+M+ GR+GSAI AEIG M+I+E+IDA+ TM LD Sbjct: 84 KFGSEGMLGTAVALSLIRELGPVLSALMVTGRAGSAITAEIGIMRISEQIDALETMALDP 143 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 + LISP+ A +IS+PLL + + I G +V K + +FS + + +++ Sbjct: 144 YKYLISPKFIAAMISMPLLCAIFDVVGIYGGWMVGVKLLGVNPGAYFSEMYKSVEWKDVY 203 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 +G +K+ I + +G+ G + + + T VV + ++++ D Sbjct: 204 SGFVKSYSFGIIIAWIGCYKGYYAGHGAEGVSRATTESVVLTSVLILVWD 253 >gi|281356267|ref|ZP_06242760.1| protein of unknown function DUF140 [Victivallis vadensis ATCC BAA-548] gi|281317636|gb|EFB01657.1| protein of unknown function DUF140 [Victivallis vadensis ATCC BAA-548] Length = 272 Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 73/272 (26%), Positives = 136/272 (50%), Gaps = 26/272 (9%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ----- 159 S K L + + +D C FC S + L IR Sbjct: 7 RSLKQLCIEVADSAIALRDDLCL--------------FCTFSRQLGKATLDAIRHPRKIR 52 Query: 160 ---MYY----VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 +YY G +P++ L+ F+ G ++A Q QL +FG E + ++L+ + + E+ Sbjct: 53 RYDVYYYMDNCGSDAMPIIALLGFLIGVILAFQAIVQLRRFGVESYVVNLVGTVIVTELA 112 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 L+TAV++AGR+GS+ AE+G+MK +EEIDA+ TMG D R L+ P++ AL++ +P LTI Sbjct: 113 PLVTAVVLAGRTGSSFAAELGTMKADEEIDAMVTMGFDPGRFLLFPKMLALLLIMPGLTI 172 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 +++ I G +++ + + ++ ++ GL+K+ A + + +G Sbjct: 173 ISDVCGIAGGMVIVCSMLQVSTGEYLTKTFEIIQPIDLAQGLVKSFVFAVIVAGIGCMKG 232 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++ +G+ T+ VV SI ++++ D++ Sbjct: 233 LNAERNAQGVGRSATSAVVTSIFLIVVTDAIL 264 >gi|124516678|gb|EAY58186.1| putative integral membrane protein [Leptospirillum rubarum] Length = 255 Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 75/256 (29%), Positives = 139/256 (54%), Gaps = 7/256 (2%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 +G+K + S S ++ V + TG F ++ + FL+ L++ VG PVV++ Sbjct: 7 VGRKCIGLF--SISGDLLITTVTALTGMF-RPAFLWWNFLVQLVK----VGADSTPVVLV 59 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 + TG V+A Q +F AE ++S+ RE+G ++T +M++GRSGS++ AE+G Sbjct: 60 TALFTGMVLALQAWIGFQKFNAEGMVGAVVSLSLTRELGPVITGLMVSGRSGSSMAAELG 119 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 +M++ E+IDA+ ++ + + L++PR +A +I+LPLLT++A+F I+G V +P Sbjct: 120 TMRVTEQIDALESLAVSPLVYLVTPRFYAGLIALPLLTVMADFVGIVGGYFVAVNLLGLP 179 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 V+ L + ++GL+KA + I + G+ + +G+ VT VV S Sbjct: 180 SNVYVKGIARYVNLHDFYSGLVKACIFGAVLSIFSCYMGYHARGGAAGVGQSVTKAVVSS 239 Query: 354 ISIVIIIDSLFAIFYF 369 ++++D + F Sbjct: 240 SMAILVLDYFLTAWLF 255 >gi|299136991|ref|ZP_07030174.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX8] gi|298601506|gb|EFI57661.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX8] Length = 259 Score = 119 bits (298), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 70/215 (32%), Positives = 119/215 (55%), Gaps = 2/215 (0%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 QM +GV +P+V+L F TG V+A Q A L +FGA + L+++ ++E+G +LT + Sbjct: 44 QMDSIGVGSLPIVVLTGFFTGCVLALQAAVSLKEFGAINMTGKLVALSMVKELGPVLTGL 103 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 M++GR+ S + +E+GSMK+ E+IDA+R +G D +R L++PR+ A + L LTI+++ Sbjct: 104 MVSGRNASGMASELGSMKVTEQIDAMRALGTDPIRKLVTPRLVATVFMLFFLTIISDACG 163 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 G ++V + FF + + ++ GL+K F I + G Sbjct: 164 TGGGALVAVVLLRLNGPAFFHTAYMSLVGGDVVEGLVKPLFSGFIIATIGCYYGLRTTGG 223 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + +GK T VV S ++I++D F + IGI Sbjct: 224 TQGVGKATTQAVVASSVLIILVD--FLVTQLMIGI 256 >gi|322435258|ref|YP_004217470.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX9] gi|321162985|gb|ADW68690.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX9] Length = 259 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 69/205 (33%), Positives = 115/205 (56%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 QM +GV +P+V+L F TG V+A Q A L QFG+ + L+++ ++E+G +LT + Sbjct: 44 QMDSIGVGSLPIVVLTGFFTGCVLALQSATALKQFGSISLTGSLVALSMVKELGPVLTGL 103 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 M++GR+ S + +E+GSM + E+IDA+R +G D +R L++PRI A ++ L LTIL++ Sbjct: 104 MVSGRNASGMASELGSMMVTEQIDAMRALGTDPIRKLVTPRIIATVVMLFFLTILSDAVG 163 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 I G ++V + + + + + ++ GL K F A I V G Sbjct: 164 IAGGALVSVTILGLNLSSYLHTSYQSLLYGDVVQGLTKPLFSAFIIATVGCFFGLKTKGG 223 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSL 363 + +GK T VV S +I++D L Sbjct: 224 TQGVGKATTQAVVYSSVFIIVVDFL 248 >gi|120602860|ref|YP_967260.1| hypothetical protein Dvul_1816 [Desulfovibrio vulgaris DP4] gi|120563089|gb|ABM28833.1| protein of unknown function DUF140 [Desulfovibrio vulgaris DP4] Length = 267 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 70/220 (31%), Positives = 125/220 (56%), Gaps = 5/220 (2%) Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 L ++ Q+Y +G + V++LI TG V+ QG + L +FG+E +++ +RE+G Sbjct: 46 LPKIVNQVYVIGYKSLFVILLIGIFTGMVLGLQGYYTLVKFGSEGLLGAAVALTLIRELG 105 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 +LTA+M+ GR+GS++ AEIG M+I ++IDA+ M ++ + L+SPRI A +++ PLLT Sbjct: 106 PVLTAIMVTGRAGSSMAAEIGVMRITDQIDALDVMDINPMGYLVSPRIAASLVAFPLLTA 165 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 L + IIG + I V+F R ++ LA++ G +K+ A + V+ +G Sbjct: 166 LFDVIGIIGGYVTGVMLLGINEGVYFHRIATSVELADVTGGFMKSLLFALIVSTVSCYQG 225 Query: 333 FAVGVHSNSLGKK-----VTTCVVQSISIVIIIDSLFAIF 367 + + + +G + T+ VV S +V++ D + F Sbjct: 226 YFTHMRRDGMGPEGVSNSTTSAVVMSCVLVLVADYVLTSF 265 >gi|196231158|ref|ZP_03130018.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428] gi|196224988|gb|EDY19498.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428] Length = 264 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 70/214 (32%), Positives = 119/214 (55%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 Q GV VP+V L+SF G +A L+ +G E ++I RE+G L+T Sbjct: 48 EQADRTGVGSVPLVALVSFFLGLTMALLTGHVLAPYGQETLVPAAVAIGFTRELGPLITG 107 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +M+A R G+A AE+G+M + EE++AI MGL +R+L+SPR+ A + +P L++++N Sbjct: 108 IMVAARVGAAFTAELGTMVVAEEVEAIEAMGLGPLRLLVSPRVLAAFLLMPCLSVVSNMM 167 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 A+ G +++ +DIP F+ + +I G++K+ IG++A +G V Sbjct: 168 ALSGGALISRWAFDIPMQGFWQSSLENLFIRDIVAGVLKSFLFGLLIGLIACYKGLTVRG 227 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 + +G T+ VV +I+ VI D++F I A+ Sbjct: 228 GAAGVGTATTSSVVTAITTVIGFDTVFNIVLVAL 261 >gi|148263112|ref|YP_001229818.1| hypothetical protein Gura_1039 [Geobacter uraniireducens Rf4] gi|146396612|gb|ABQ25245.1| protein of unknown function DUF140 [Geobacter uraniireducens Rf4] Length = 256 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 68/206 (33%), Positives = 118/206 (57%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +++Q+ ++G V+ L + TG V+ QG + L++FG+E +++ +RE+G +L Sbjct: 43 ILKQIRFIGAKSFFVIFLTASFTGMVLGLQGYYTLAKFGSEGMLGSAVALSLIRELGPVL 102 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA+M+ GR+GSAI AEIG M+I E+IDA+ TM L+ + L+SP++ A IISLPLL + + Sbjct: 103 TALMVTGRAGSAISAEIGIMRITEQIDALETMALEPCKYLVSPKLLAAIISLPLLCAIFD 162 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I G +V K + +F + ++++G+IK+ I + +G+ Sbjct: 163 VVGIYGGYLVGVKLLGVNPGAYFHEMEKSVEWKDVYSGIIKSVSFGVIIAWICCYKGYFA 222 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361 G + + + T VV S +V+I D Sbjct: 223 GHGAEGVSRATTAAVVMSSVMVLIWD 248 >gi|46579657|ref|YP_010465.1| hypothetical protein DVU1246 [Desulfovibrio vulgaris str. Hildenborough] gi|46449072|gb|AAS95724.1| membrane protein, putative [Desulfovibrio vulgaris str. Hildenborough] gi|311233455|gb|ADP86309.1| protein of unknown function DUF140 [Desulfovibrio vulgaris RCH1] Length = 267 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 70/220 (31%), Positives = 125/220 (56%), Gaps = 5/220 (2%) Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 L ++ Q+Y +G + V++LI TG V+ QG + L +FG+E +++ +RE+G Sbjct: 46 LPKIVNQVYVIGYKSLFVILLIGIFTGMVLGLQGYYTLVKFGSEGLLGAAVALTLIRELG 105 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 +LTA+M+ GR+GS++ AEIG M+I ++IDA+ M ++ + L+SPRI A +++ PLLT Sbjct: 106 PVLTAIMVTGRAGSSMAAEIGVMRITDQIDALDVMDINPMGYLVSPRIAASLVAFPLLTA 165 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 L + IIG + I V+F R ++ LA++ G +K+ A + V+ +G Sbjct: 166 LFDVIGIIGGYVTGVMLLGINEGVYFHRIATSVELADVTGGFMKSLLFALIVSTVSCYQG 225 Query: 333 FAVGVHSNSLGKK-----VTTCVVQSISIVIIIDSLFAIF 367 + + + +G + T+ VV S +V++ D + F Sbjct: 226 YFTHMRRDGMGPEGVSNSTTSAVVMSCVLVLVADYVLTSF 265 >gi|303246386|ref|ZP_07332665.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans JJ] gi|302492096|gb|EFL51971.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans JJ] Length = 268 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 67/190 (35%), Positives = 111/190 (58%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +++Q+Y++GV + V++LI TG V+ QG + L +FG+E +++ +RE+G +L Sbjct: 50 IVQQVYFIGVKSIFVIVLIGLFTGMVLGLQGYYTLVKFGSEGLLGAAVALSIIRELGPVL 109 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA+M+ GR+GS+I AEIG M+I+E+IDA+ TMG++ +R LI+PR+ A +I PLLT + + Sbjct: 110 TAIMLTGRAGSSIAAEIGIMRISEQIDALTTMGINPMRFLIAPRLAASLICFPLLTAIFD 169 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I G + I V+F R + LA++ G K+ A + + EG+ Sbjct: 170 VVGIGGGYLTGVVLLGINPGVYFDRIDAAVELADVTGGFEKSIVFALLVAAICCYEGYFT 229 Query: 336 GVHSNSLGKK 345 G K Sbjct: 230 HTRREGFGAK 239 >gi|15605864|ref|NP_213241.1| hypothetical protein aq_355 [Aquifex aeolicus VF5] gi|2983037|gb|AAC06647.1| hypothetical protein aq_355 [Aquifex aeolicus VF5] Length = 245 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 70/205 (34%), Positives = 112/205 (54%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I Q+ YV PVV++ S TG VIA Q +F AE +++I RE+G +LT Sbjct: 33 ISQLTYVAAETTPVVLVTSLFTGGVIALQTYSTFHRFNAEYLIGAVVAISMGRELGPVLT 92 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 ++M+ R GSA+ A IG+M+I ++IDA+ M ++ + L++PRI+A +PLLT+L++ Sbjct: 93 SLMVVARVGSAMTASIGTMRITQQIDALEVMAINPISFLVTPRIFATTFGVPLLTVLSDV 152 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + I G V K + + +++ + +I GL KA F IG V+ GF Sbjct: 153 AGIFGGWFVATKLFGVNEYLYWQKMVDLTEFHDIVGGLYKATFFGFIIGAVSCYYGFYTK 212 Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361 + +GK T VV S +++I D Sbjct: 213 GGTAGVGKATTNSVVTSSMLILISD 237 >gi|206603562|gb|EDZ40042.1| Putative integral membrane protein [Leptospirillum sp. Group II '5-way CG'] Length = 255 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 65/211 (30%), Positives = 118/211 (55%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 Q+ VG PVV++ + TG V+A Q +F AE ++S+ RE+G ++T + Sbjct: 45 QLVKVGADSTPVVLVTALFTGMVLALQAWIGFQKFNAEGMVGAVVSLSLTRELGPVITGL 104 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 M++GRSGS++ AE+G+M++ E+IDA+ ++ + + L++PR +A +I+LPLLT++A+F Sbjct: 105 MVSGRSGSSMAAELGTMRVTEQIDALESLAVSPLVYLVTPRFYAGLIALPLLTVMADFVG 164 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 I+G V +P V+ L + ++GL+KA + I + G+ Sbjct: 165 IVGGYFVAVNLLGLPSNVYVKGIARYVNLHDFYSGLVKACIFGAVLSIFSCYMGYHARGG 224 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+ VT VV S ++++D + F Sbjct: 225 AAGVGQSVTKAVVSSSMAILVLDYFLTAWLF 255 >gi|116749878|ref|YP_846565.1| hypothetical protein Sfum_2450 [Syntrophobacter fumaroxidans MPOB] gi|116698942|gb|ABK18130.1| protein of unknown function DUF140 [Syntrophobacter fumaroxidans MPOB] Length = 266 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 115/212 (54%), Gaps = 1/212 (0%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 QM VGV +P+V L+SFV G ++ Q A+QL +FGA ++ L + RE+ LLTA+ Sbjct: 53 QMDEVGVKSIPIVALVSFVIGIILVLQTAYQLEKFGAINYAASLAGVALTREMAPLLTAI 112 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++AGR +A AE+G+M + EEI A+ M ++ V L+ PR A+++ LP LT+LA+ Sbjct: 113 VVAGRVSAAFTAELGTMLVTEEILALEVMAINPVAYLVVPRFIAMLVMLPCLTVLADLIG 172 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 +IG V I +++ L +I TGL K+ A I +V F V Sbjct: 173 MIGGYAVGTTAVGIRSSLYIQNTIDALLLKDILTGLTKSVVFAGIIAMVGCYMAFVVRGG 232 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLF-AIFYF 369 + +GK VV S+ +I+ D F +FY Sbjct: 233 AEGVGKATMISVVTSLISIILADCFFTTVFYL 264 >gi|87311113|ref|ZP_01093237.1| probable permease of ABC transporter [Blastopirellula marina DSM 3645] gi|87286204|gb|EAQ78114.1| probable permease of ABC transporter [Blastopirellula marina DSM 3645] Length = 280 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 70/207 (33%), Positives = 108/207 (52%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 +L+ Y VGV +PVV L G V+A Q FQ Q G E ++++ +RE+G + Sbjct: 49 TLVPNFYQVGVMSLPVVALTGTFIGMVLAVQSYFQFRQLGLETRLGAVINMTLVRELGPV 108 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 L A M+AGR GSA+ AE+G+M++ E+IDA+ +MG + + L+ PR A +I +P LT++A Sbjct: 109 LAATMLAGRVGSAMAAELGTMRVTEQIDALDSMGTNPIHYLVVPRFLACVILIPALTVMA 168 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 +F +G I + +IF GLIK+ F I IV+ GF Sbjct: 169 DFMGFVGGYFYSVNILGIDQHYYMYNSEQFVQSWDIFYGLIKSVFFGGTIAIVSCHRGFH 228 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIID 361 + +G+ T V S ++ ID Sbjct: 229 CEAGAEGVGRAATAAFVYSFVFILAID 255 >gi|78355070|ref|YP_386519.1| transporter [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217475|gb|ABB36824.1| transporter, putative [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 250 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 72/214 (33%), Positives = 126/214 (58%), Gaps = 1/214 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 Q+ G + +V +I+ TG ++A Q A QL + GA + +++S+ ++E+G LLTA Sbjct: 36 HQLAETGTRSLGIVSVIAACTGMILALQAAQQLEKVGALSYVANMVSVTIVKELGPLLTA 95 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +++AGRSG+A AEI +M+I EEIDA+ +G+ VR L+ P++ A++I LP+LT+ A+ Sbjct: 96 IILAGRSGAAFCAEISTMQIYEEIDALEVIGISPVRYLVVPKLCAMLIMLPVLTLWADLV 155 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 II + + F+ + ++ ++ + ++KA AI ++ +GF Sbjct: 156 GIISGGLFAALGLGLSFSGYLNQAVYFLGTGDVVSSVVKAAGFGTAITLICCWQGFMAQG 215 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLF-AIFYFA 370 + +G++ T VVQSI +VI++D F AI Y A Sbjct: 216 GAADVGRRTTKAVVQSIFMVILLDLFFTAINYLA 249 >gi|303246825|ref|ZP_07333102.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans JJ] gi|302491842|gb|EFL51722.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans JJ] Length = 254 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 67/206 (32%), Positives = 117/206 (56%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 M ++G +P++ +IS G ++A Q A QL + GA + +L+ + E+G LLT + Sbjct: 41 HMAWIGADSLPIISIISACVGIILALQSATQLEKVGAMSYVANLVGYSIITELGPLLTCL 100 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++AGR+G+A AEI +M+I+EEIDA+ MG+D VR L+ P+ A+ + PLLT+ + Sbjct: 101 ILAGRAGAAFTAEIATMRISEEIDALEVMGVDPVRFLVWPKFAAMCVMAPLLTLWGDCIG 160 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 I I + +F + T+ ++ +GL+K+ I I++ +GF Sbjct: 161 ISAGGIFSALALGLSGKAYFLQTAGFLTMRDLLSGLVKSAGFGVTITIISCWQGFLAREG 220 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLF 364 + +G++ T VVQSI ++I++D F Sbjct: 221 AADVGRRTTRAVVQSIFLMILLDLFF 246 >gi|53802513|ref|YP_112711.1| ABC transporter permease [Methylococcus capsulatus str. Bath] gi|53756274|gb|AAU90565.1| putative ABC transporter, permease protein [Methylococcus capsulatus str. Bath] Length = 406 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 70/214 (32%), Positives = 130/214 (60%) Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219 ++ G + + L+ F+ G V++ + QL FGA+++ ++++ + +RE+G LL A++ Sbjct: 192 IHETGGRALGITALVGFLIGVVVSYLSSLQLKTFGAQVYIVNILGMSIIRELGPLLAAIL 251 Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279 +AGRSGS++ A IG M++ +E+DA+ MG+ LI P++ AL+++LPLL + + A+ Sbjct: 252 VAGRSGSSMTARIGVMRVTQELDALAAMGISQSLRLILPKVVALVVALPLLVVWTDVVAL 311 Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339 G ++ +I + FF + S +AN GL KA + ++A G + ++ Sbjct: 312 AGGAVSAHLELEIGYHQFFQKLPSAVPVANFAIGLGKAAVFGLFVALIACHYGLRIAPNT 371 Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 SLG + T VV SI++VI++D++FAI + ++GI Sbjct: 372 ESLGNETTNSVVVSITLVILVDAVFAILFRSVGI 405 >gi|207727753|ref|YP_002256147.1| abc-type transport system involved in resistance to organic solvents, permease component protein [Ralstonia solanacearum MolK2] gi|206590994|emb|CAQ56606.1| abc-type transport system involved in resistance to organic solvents, permease component protein [Ralstonia solanacearum MolK2] Length = 374 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 104/373 (27%), Positives = 185/373 (49%), Gaps = 16/373 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITE---IDTIGAELIMY 60 +G +V +G+W + ++E A V + + I++ + +TE ID GA+L+ Sbjct: 15 DGRSVAYLSGDWTTLALAERAG--VRSARRQIRAGLDNANAWCLTEVGRIDHFGAQLLW- 71 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 + G + + +Q +I R K + + N L G ++ Sbjct: 72 ---RAWGNRWPEHLDARADQR-RMIDRVARLDPGGWKKRIAPRINPVTVL----GGAMLD 123 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 F ++G ++ + F + ++ G + +Y G + + L+ F+ G Sbjct: 124 FAGHLRIGVAMVGQLMFDLLRFARAPHR--GPWREISANIYSTGYKALGITALVGFLIGI 181 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V++ A QL FGA IF ++++ + +RE+G +L A+++AGRSGSAI A+IG M++ EE Sbjct: 182 VLSYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEE 241 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +DA+R MG+ LI P++ AL I++PLL + A+ G + DI F + Sbjct: 242 LDAMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITS 301 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 +AN++ G+ K I +VA G + ++ SLG+ TT VV SI++VI+ Sbjct: 302 LPDAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITVVILA 361 Query: 361 DSLFAIFYFAIGI 373 D++FAI + +GI Sbjct: 362 DAVFAILFKDVGI 374 >gi|223940418|ref|ZP_03632271.1| protein of unknown function DUF140 [bacterium Ellin514] gi|223890913|gb|EEF57421.1| protein of unknown function DUF140 [bacterium Ellin514] Length = 259 Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 76/233 (32%), Positives = 125/233 (53%), Gaps = 1/233 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + T E +S + KG + I Q+Y++GV VV++ TG V+ Q +Q Sbjct: 16 LGRISLLTKEALSSLFSLKGSWGNFIYQLYFIGVKSQSVVLITGAFTGMVLCAQTYYQFH 75 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 Q + ++ ++S+ E+G +LTA+M+AGR G+A+ AEIG+MK+ E++DA+RT+ Sbjct: 76 QVKLDTATLAVVSVSMCSELGPVLTALMVAGRVGAAMAAEIGTMKVTEQVDALRTLATHP 135 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A ++SLPLLT A II +V I ++ +++ Sbjct: 136 VDYLVVPRLTASVVSLPLLTAEAIAVGIISGYMVGVYLLGIDPVYSYTNMLKYTNSSDVM 195 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 TG+IK+ I I+ +G G + +G+ T VV + SI I+I + F Sbjct: 196 TGIIKSVIFGVIIAIIGCYKGMTCGEGAEGVGRATTEAVVYA-SITILISNFF 247 >gi|222109464|ref|YP_002551728.1| hypothetical protein Dtpsy_0244 [Acidovorax ebreus TPSY] gi|221728908|gb|ACM31728.1| protein of unknown function DUF140 [Acidovorax ebreus TPSY] Length = 372 Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 73/214 (34%), Positives = 127/214 (59%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 +Y +G + +P+ L+ F+ G V+A + QL QFGAE F ++++ I +RE+G +L A+ Sbjct: 158 HLYRMGATALPITALVGFLIGVVLAYLMSLQLRQFGAEAFIVNILGISLIRELGPMLGAI 217 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++AGRSGSAI A+IG M++ EE+DA+R MG+ L+ PR AL +++PL+ + +A Sbjct: 218 LVAGRSGSAITAQIGVMRVTEELDAMRVMGIPHGFRLVMPRALALALAMPLVALWTTLAA 277 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 + G + I A F + ++N++ + K+ I ++ G V + Sbjct: 278 LAGGMLAADLTMGISSAYFAQALPAAVNVSNLWLAMSKSVVFGVFIALIGCHWGLRVKPN 337 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 + SLG+ T VV +I++VII+D+LFA+ + +G Sbjct: 338 TQSLGEGTTASVVSAITMVIIVDALFAVAFKNVG 371 >gi|67458472|ref|YP_246096.1| ABC transporter permease protein [Rickettsia felis URRWXCal2] gi|75537058|sp|Q4UNC7|Y080_RICFE RecName: Full=Probable ABC transporter permease protein RF_0080 gi|67004005|gb|AAY60931.1| ABC transporter permease protein [Rickettsia felis URRWXCal2] Length = 259 Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 81/267 (30%), Positives = 145/267 (54%), Gaps = 15/267 (5%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKG--FLLSLIRQMYYVGVS 166 N+ +GK+ +KF S + F A S + +L +IRQ+ ++G Sbjct: 4 NIANSVGKRTIKFAQSVGSFSLF---------SFAAVSSIIRPPLYLSLIIRQLLFIGFH 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTAVMIAGRSG 225 +PVV + +F +GAV+A Q S+F AE SI + +L L RE+G +L +M+AGR G Sbjct: 55 SLPVVAMTTFFSGAVLALQSYTGFSRFSAE-SSIATVVVLSLTRELGPVLAGLMVAGRVG 113 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 ++I AEI +M++ E++DA+ T+ D ++ L+ PR+ A II++P L ++ + ++G +V Sbjct: 114 ASIAAEIATMRVTEQVDALYTLSTDPIKYLVFPRVIAAIITMPCLVLIGDIIGVMGGYLV 173 Query: 286 -IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 ++K A S FH + ++ +GL+KA I I++ G+ G + +G+ Sbjct: 174 GVYKLDFNSTAYLTSTFHYLEPI-DVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGR 232 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFAI 371 T+ VV S +++I + L +F + Sbjct: 233 ATTSAVVNSSILILISNYLITELFFKV 259 >gi|315125511|ref|YP_004067514.1| ABC transporter membrane protein [Pseudoalteromonas sp. SM9913] gi|315014024|gb|ADT67362.1| ABC transporter membrane protein [Pseudoalteromonas sp. SM9913] Length = 259 Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 70/199 (35%), Positives = 116/199 (58%), Gaps = 1/199 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y VG + ++++ G V+A QG L +GAE L+++ LRE+G ++ Sbjct: 43 LVRQLYMVGSQSLLIIVVSGLFIGMVLALQGYTVLVDYGAEDSLGPLVALSLLRELGPVV 102 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+P+L ++ + Sbjct: 103 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAIDPLRRIIAPRFWAGLISMPMLALIFS 162 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 AIIGA +V + + F+S S + +I GLIK+ A + +A+ +G+ Sbjct: 163 AVAIIGAHLVGVDWLGVDTGSFWSIMQSQVSFEKDILNGLIKSIVFAIVVTWIALYKGYD 222 Query: 335 VGVHSNSLGKKVTTCVVQS 353 S + K T VV S Sbjct: 223 CVPTSEGISKATTETVVHS 241 >gi|121592684|ref|YP_984580.1| hypothetical protein Ajs_0250 [Acidovorax sp. JS42] gi|120604764|gb|ABM40504.1| protein of unknown function DUF140 [Acidovorax sp. JS42] Length = 372 Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 130/223 (58%) Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209 +G + +Y +G + +P+ L+ F+ G V+A + QL QFGAE F ++++ I +R Sbjct: 149 RGPWRDISGHLYRMGATALPITALVGFLIGVVLAYLMSLQLRQFGAEAFIVNILGISLIR 208 Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 E+G +L A+++AGRSGSAI A+IG M++ EE+DA+R MG+ L+ PR AL +++PL Sbjct: 209 ELGPMLGAILVAGRSGSAITAQIGVMRVTEELDAMRVMGIPHGFRLVMPRALALALAMPL 268 Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329 + + +A+ G + I A F + ++N++ + K+ I ++ Sbjct: 269 VALWTTLAALAGGMLAADLTMGISSAYFAQALPAAVNVSNLWLAMSKSVVFGVFIALIGC 328 Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 G V ++ SLG+ T VV +I++VII+D+LFA+ + +G Sbjct: 329 HWGLRVKPNTQSLGEGTTASVVSAITMVIIVDALFAVAFKNVG 371 >gi|302341646|ref|YP_003806175.1| hypothetical protein Deba_0204 [Desulfarculus baarsii DSM 2075] gi|301638259|gb|ADK83581.1| protein of unknown function DUF140 [Desulfarculus baarsii DSM 2075] Length = 244 Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 72/214 (33%), Positives = 120/214 (56%), Gaps = 1/214 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +++QM +VG + VV+L TG V A Q + S FGAE +++ RE+G +L Sbjct: 31 VLKQMEFVGNKSINVVMLTGAFTGGVFALQSYYGFSLFGAESLVGSTVALALTRELGPVL 90 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 T++M+ GR+GSA+ AEIG+M++ E+IDA+ M ++ V+ L+ PR+ A +I LP LTI+AN Sbjct: 91 TSLMVTGRAGSAMAAEIGTMRVTEQIDALYVMAVNPVQYLVLPRVLAAVIMLPALTIVAN 150 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 F I+G V I VF ++ +I GL+K+ + ++ +GF Sbjct: 151 FIGILGGYAVGVGMLGINEGVFVAKIIEYVEFDDIGMGLVKSAIFGLILSLIGCYKGFYT 210 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID-SLFAIFY 368 + +G+ T VV + +++ D +L AI + Sbjct: 211 SGGAEGVGRATTEAVVLASVLILAADYALTAIMF 244 >gi|328954039|ref|YP_004371373.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM 11109] gi|328454363|gb|AEB10192.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM 11109] Length = 377 Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 99/369 (26%), Positives = 178/369 (48%), Gaps = 20/369 (5%) Query: 12 AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFMEKYHGK 68 +G+W AD V + S+ + + D + DT +M F + + Sbjct: 22 SGDWLLGGELPAADRVQQRLEGSLGVRNLVFDTRELAHWDTGLLTFLMSLATFCSQQNIY 81 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR----SFFYNSFKNLHYHIGKKIVKFIND 124 + G+ ++L L S KK ++ +R +F N N G+ +++FI D Sbjct: 82 LDRDGLPPGAKRLLELASAVPEKKDAHKVEERLSFLAFLGNETVNFFQSAGE-LLEFIGD 140 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + +L L+ +++ L LI M VGV +P+V LI F+ G ++A Sbjct: 141 AV--IAVLRLIRGQA--------QYRRADLGLI--MQAVGVQALPIVSLICFLVGLILAF 188 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 GA QL FGA+I+ DL+ I +R + ++T +++AGR+G A A++G+M++N+EIDA+ Sbjct: 189 IGAIQLKLFGAQIYVADLVGIAMVRLMAAIMTGIVMAGRTGGAFAAQLGTMQVNQEIDAL 248 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 +T+G+ + L+ PR+ AL + +PLL + AN I+G V I F ++++ + Sbjct: 249 KTLGISPMEFLVLPRMLALALMMPLLCLYANVMGILGGMAVGVGMLGIGFIQYYNQTAAA 308 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L N+ GL + + G G ++++G T+ VV +I +I+ + Sbjct: 309 VGLWNLGIGLFSGTVFGVIVALAGCMRGMQCGRSASAVGDAATSAVVTAIVGIIVSTAAI 368 Query: 365 AIFYFAIGI 373 I +GI Sbjct: 369 TILCNFLGI 377 >gi|187734672|ref|YP_001876784.1| protein of unknown function DUF140 [Akkermansia muciniphila ATCC BAA-835] gi|187424724|gb|ACD04003.1| protein of unknown function DUF140 [Akkermansia muciniphila ATCC BAA-835] Length = 266 Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 82/272 (30%), Positives = 144/272 (52%), Gaps = 19/272 (6%) Query: 110 LHYH----IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 + +H IG+ ++ ++ S +GL++ C S +F+ + L+ Q+ +GV Sbjct: 1 MQFHVATMIGRAALRLVDRLGS----IGLLLYQVAS-CMWSGQFR--MRVLVEQIAKIGV 53 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 PVVI+ TGAV+ Q FQL E ++++ RE+G ++T +M+AGR G Sbjct: 54 QSQPVVIITGAFTGAVLEAQTLFQLQTVRMETMGGAVVAVGMFRELGPVITGLMLAGRVG 113 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 SA+ AEIG+MK+ E++DA+++M +D V L+ PRI A++IS+P+L + A I A IV Sbjct: 114 SAMAAEIGTMKVTEQVDALKSMNVDPVDYLVKPRIQAMLISMPILMMEAVLVGIASAYIV 173 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF-----AVGVHSN 340 +++ A + T+ +I L+KA I ++ +EG AVGV + Sbjct: 174 SVTAFNVDQAYWMHFMSKFVTMGDIIVALVKALAFGLIISTISCREGLNTTNGAVGVGKS 233 Query: 341 SLGKKVTTCVVQSIS---IVIIIDSLFAIFYF 369 ++ V V I+ + +I++S F + + Sbjct: 234 TMQAMVYASVALLIANFILTMILNSFFPMGFM 265 >gi|323699476|ref|ZP_08111388.1| protein of unknown function DUF140 [Desulfovibrio sp. ND132] gi|323459408|gb|EGB15273.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans ND132] Length = 267 Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 71/211 (33%), Positives = 119/211 (56%), Gaps = 5/211 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 ++RQ+Y++GV V V+ LI TG V+ Q + LS FGA+ F +++ +RE+ +L Sbjct: 49 IVRQIYFIGVQSVSVIALIGLFTGMVMGMQLYYALSVFGADGFLGTGVALSMVRELAPVL 108 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA+M+ GR+GSA+ AEIG M+I+E+IDA+ M ++ +R L++P++ A +IS P+LT N Sbjct: 109 TAIMLTGRAGSAMTAEIGVMRISEQIDALTIMDINPMRYLVAPKMAACLISFPILTAFFN 168 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 A+ G + K V++SR + +I G IK+ + + EG+ Sbjct: 169 LIALWGGWLTGVKLLGANAGVYWSRVSGSLDWDDIEGGFIKSIVFGLLVCTICCFEGYNT 228 Query: 336 GVHSNSLG-----KKVTTCVVQSISIVIIID 361 + S G + T+ VV+S I++ D Sbjct: 229 HLRSGHAGPEGVSQSTTSAVVKSCVIILAAD 259 >gi|119776212|ref|YP_928952.1| hypothetical protein Sama_3080 [Shewanella amazonensis SB2B] gi|119768712|gb|ABM01283.1| putative membrane protein [Shewanella amazonensis SB2B] Length = 260 Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 76/222 (34%), Positives = 124/222 (55%), Gaps = 2/222 (0%) Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209 KGF L L++Q+Y VGV + ++++ G V+A QG L FG E ++++ LR Sbjct: 40 KGFPL-LVKQLYVVGVQSLIIILVSGLFIGMVLALQGYTILVDFGTEESLGPMVALSLLR 98 Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 E+G ++TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+PL Sbjct: 99 ELGPVVTALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAVDPLRQIIAPRFWAGVISMPL 158 Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVA 328 L ++ I G IV ++ I F+S ++ +I LIK+ A + +A Sbjct: 159 LALMFTAVGIWGGHIVGVEWKGIDNGAFWSILQASVEWRQDIVNCLIKSLVFAVVVTWIA 218 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + G+ V + + K T+ VVQS V+ +D L F Sbjct: 219 LYRGYEVVPNPEGISKATTSTVVQSSLAVLALDFLLTALMFG 260 >gi|163788065|ref|ZP_02182511.1| ABC transporter, permease [Flavobacteriales bacterium ALC-1] gi|159876385|gb|EDP70443.1| ABC transporter, permease [Flavobacteriales bacterium ALC-1] Length = 260 Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 76/223 (34%), Positives = 121/223 (54%) Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198 TG F +K L+ Q Y +G + +V + F+ G V+ Q L +FGA + Sbjct: 25 TGRFFKELFKRPFEFKELLNQCYSMGNKSLLLVGITGFIIGLVLTLQTRPTLMEFGAVSW 84 Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258 ++SI +REIG +LTA++ AGR GS I AEIGSMK+ E+IDA+ G + + L+ Sbjct: 85 MPSMVSISIVREIGPILTALVCAGRIGSGIGAEIGSMKVTEQIDAMEVSGTNPFKYLVVT 144 Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318 R+ A+ + LPLL I+ + A++G+ +V D+ F ++F++ +I IK+ Sbjct: 145 RVLAVTLMLPLLVIIGDAVALLGSYLVESVKGDVSFVLYFNQVFDALKFGDIMPATIKSF 204 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 F AIGIV +G+ + +GK T VV + ++ IID Sbjct: 205 FFGLAIGIVGCYKGYYCKKGTAGVGKAANTAVVFTSLLLFIID 247 >gi|320354123|ref|YP_004195462.1| hypothetical protein Despr_2023 [Desulfobulbus propionicus DSM 2032] gi|320122625|gb|ADW18171.1| protein of unknown function DUF140 [Desulfobulbus propionicus DSM 2032] Length = 272 Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 76/224 (33%), Positives = 121/224 (54%), Gaps = 10/224 (4%) Query: 147 YKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206 ++F+ LI+Q+ ++G + V+ + TG V+ QG + L +FGAE +S+ Sbjct: 48 FRFR----ELIKQVGFIGAGSLTVIFFTALSTGMVLGLQGYYSLHKFGAEGMLGSAVSLS 103 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 + E+G +LTA+M+AGR+GSA+ AEIG M+I+E+IDA+ M +D R ISP++ A +IS Sbjct: 104 LIMELGPVLTALMVAGRAGSAMCAEIGIMRISEQIDALECMAIDPFRYFISPKLLATLIS 163 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326 +PLLT + I G + K + FFS + T ++ G+IK+ A + Sbjct: 164 VPLLTAFFDVIGITGGYLAGVKLMGVNSGAFFSGMEQSVTNHDVRLGVIKSFVFALLVAW 223 Query: 327 VAMKEGFAV------GVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + G+ V G + S+ K T VV S V+I D L Sbjct: 224 ICTGRGYFVQTIRGAGFGAESVSKVTTQAVVMSSISVLIFDYLL 267 >gi|120600243|ref|YP_964817.1| hypothetical protein Sputw3181_3451 [Shewanella sp. W3-18-1] gi|146291827|ref|YP_001182251.1| hypothetical protein Sputcn32_0722 [Shewanella putrefaciens CN-32] gi|120560336|gb|ABM26263.1| protein of unknown function DUF140 [Shewanella sp. W3-18-1] gi|145563517|gb|ABP74452.1| protein of unknown function DUF140 [Shewanella putrefaciens CN-32] gi|319425062|gb|ADV53136.1| ABC phospholipid transporter, inner membrane subunit, MlaE [Shewanella putrefaciens 200] Length = 261 Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 75/222 (33%), Positives = 124/222 (55%), Gaps = 2/222 (0%) Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209 KGF L L+RQ+Y VGV + ++++ G V+A QG L FG E ++++ LR Sbjct: 40 KGFPL-LVRQIYVVGVQSMVIIVVSGLFIGMVLALQGYNILVGFGTEESLGPMVALSLLR 98 Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 E+G ++TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+PL Sbjct: 99 ELGPVVTALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVISMPL 158 Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVA 328 L ++ I G +V ++ I F+S ++ +I LIK+ A + +A Sbjct: 159 LALMFTAVGIYGGHLVGVEWKGIDSGAFWSILQASVEWQKDILNCLIKSGVFAVVVTWIA 218 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + G+ V + + + T+ VVQS V+ +D L F Sbjct: 219 LYRGYQVIPNPEGISRATTSTVVQSSLAVLALDFLLTALMFG 260 >gi|317152440|ref|YP_004120488.1| hypothetical protein Daes_0725 [Desulfovibrio aespoeensis Aspo-2] gi|316942691|gb|ADU61742.1| protein of unknown function DUF140 [Desulfovibrio aespoeensis Aspo-2] Length = 268 Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 70/210 (33%), Positives = 117/210 (55%), Gaps = 5/210 (2%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 +RQ+Y++GV V V+ LI TG V+ Q + LS FGA+ F +++ +RE+ +L Sbjct: 51 VRQIYFIGVQSVTVIALIGLFTGMVMGMQLYYALSVFGADGFLGTGVALSMVRELAPVLA 110 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A+M+ GR+GSA+ AEIG M+I+E+IDA+ MG++ +R L++P++ A +IS P+L N Sbjct: 111 AIMLTGRAGSAMTAEIGVMRISEQIDALTIMGINPMRYLVAPKMAACLISFPILNAFFNL 170 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 A+ G + K V+++R + ++I G IK+ A + + EG+ Sbjct: 171 IALWGGWLTGVKLLGANEGVYWARVQGSLDWSDIQGGFIKSMVFAVLVCTICCFEGYYTH 230 Query: 337 VHSNSLG-----KKVTTCVVQSISIVIIID 361 S G + T VV+S I++ D Sbjct: 231 TRSGHAGPEGVSQSTTNAVVKSCVIILAAD 260 >gi|320353203|ref|YP_004194542.1| hypothetical protein Despr_1079 [Desulfobulbus propionicus DSM 2032] gi|320121705|gb|ADW17251.1| protein of unknown function DUF140 [Desulfobulbus propionicus DSM 2032] Length = 371 Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 99/363 (27%), Positives = 177/363 (48%), Gaps = 21/363 (5%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFMEKYHGKIKL 71 G W ++V A++ SI++ + + DL+ E DT ++ F++ + Sbjct: 23 GAWTLRTDPPPPTELVGALDSSIRTLAFLSTDLA---EWDT----RLLVFLKATTAAARN 75 Query: 72 QGVSTHIEQLFSLISFTHRKKIKNQKPQR-SFFYNSFKNLHYHIGKKIVKFINDSCSQAH 130 G++ +E L + P++ ++ N + L IG+ + + A Sbjct: 76 GGIAVDLEGLPP--GVRRLLALSEAVPEKVTYGKNVRELLVTRIGRLTLALSGQAREAAA 133 Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYY----VGVSGVPVVILISFVTGAVIAQQG 186 G +I A FK R +Y GV +P+V LI+ + G +++ G Sbjct: 134 FTGEIILACMALAAGKKPFK------WRDFFYFIQSCGVESLPIVSLIAVLVGVILSFVG 187 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A QL FGA+I+ +L+ + + E+G L++ V+IAGR G+A A++G+M++NEEIDA+RT Sbjct: 188 AVQLQMFGAQIYVANLVGLGMVLEMGALMSGVIIAGRIGAAYAAQLGTMQVNEEIDALRT 247 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG+ V L+ PR+ AL++ LPLL + A+ I+G S++ D+ + + T Sbjct: 248 MGISPVGFLVLPRMLALMLMLPLLCVYADIMGILGGSVIGVTMLDLSLIEYLEQTRKTLR 307 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L G++KA IG G G + ++G+ T+ VV SI ++++ DS+ Sbjct: 308 LGQCGQGILKASIFGVLIGYAGCLRGMQCGRSALAVGEATTSAVVTSIVLIVVSDSIITF 367 Query: 367 FYF 369 + Sbjct: 368 LLY 370 >gi|91203173|emb|CAJ72812.1| similar to ABC-type transport system permease protein [Candidatus Kuenenia stuttgartiensis] Length = 258 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 70/209 (33%), Positives = 122/209 (58%), Gaps = 1/209 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++++ G +V +I+ TG V++ Q + L +GAE++ ++S+ +RE+G +L Sbjct: 42 LLKEIDNFGAGSFLLVNIIALFTGMVMSLQTIYGLRMYGAEMYVGSVVSLSIVRELGPVL 101 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 T++M+ R GS I AEIGSM++ E+IDA+R +G ++ L+SP+I+A +I+LPLLT+ A+ Sbjct: 102 TSIMVGARIGSGIAAEIGSMQVTEQIDAMRALGASPIKKLVSPKIFAGLITLPLLTVTAD 161 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 F I G I+ DI + + +T T+++ +G+ K F I ++ G Sbjct: 162 FIGIFGGLIIATFELDIDHIFYINSILTTITISDFISGIGKTVFFGLLIAVIGCYFGLKT 221 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + +G+ T VV +ISI I+I F Sbjct: 222 SGGTTGVGRSTTISVV-TISISILIADFF 249 >gi|15892052|ref|NP_359766.1| ABC transporter permease protein [Rickettsia conorii str. Malish 7] gi|34580917|ref|ZP_00142397.1| ABC transporter permease protein [Rickettsia sibirica 246] gi|229586334|ref|YP_002844835.1| ABC transporter permease protein [Rickettsia africae ESF-5] gi|81528535|sp|Q92JD8|Y129_RICCN RecName: Full=Probable ABC transporter permease protein RC0129 gi|15619171|gb|AAL02667.1| ABC transporter permease protein [Rickettsia conorii str. Malish 7] gi|28262302|gb|EAA25806.1| ABC transporter permease protein [Rickettsia sibirica 246] gi|228021384|gb|ACP53092.1| ABC transporter permease protein [Rickettsia africae ESF-5] Length = 259 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 79/266 (29%), Positives = 140/266 (52%), Gaps = 13/266 (4%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKG--FLLSLIRQMYYVGVS 166 N+ +GK+ VKF S + F A S + +L +IRQ+ ++G Sbjct: 4 NIANSVGKRTVKFAQSVGSFSLF---------SFAAVSSIIRPPLYLSLIIRQLLFIGFH 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTAVMIAGRSG 225 +PVV + +F +GAV+A Q S+F AE SI + +L L RE+G +L +M+AGR G Sbjct: 55 SLPVVAMTTFFSGAVLALQSYIGFSRFSAES-SIATVVVLSLTRELGPVLAGLMVAGRVG 113 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 ++I AEI +M++ E+IDA+ T+ D ++ L+ PR+ II++P L ++ + ++G +V Sbjct: 114 ASIAAEIATMRVTEQIDALYTLSTDPIKYLVFPRVITAIITMPCLVLIGDIIGVMGGYLV 173 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 D A + + ++ +GL+KA I I++ G+ G + +G+ Sbjct: 174 GVYKLDFNSAAYLTSTFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRA 233 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAI 371 T+ VV S +++I + L +F + Sbjct: 234 TTSAVVNSSILILISNYLITELFFKV 259 >gi|146281424|ref|YP_001171577.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas stutzeri A1501] gi|145569629|gb|ABP78735.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas stutzeri A1501] Length = 265 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 70/222 (31%), Positives = 129/222 (58%), Gaps = 2/222 (0%) Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209 GF L L++Q+Y VGV + +V++ G V+A QG LS +G+E ++++ LR Sbjct: 43 NGFSL-LVKQLYSVGVLSLAIVVVSGIFIGMVLALQGYNILSSYGSEQAVGQMVALTLLR 101 Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 E+G ++TA++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +I+PR+WA ISLPL Sbjct: 102 ELGPVVTALLFAGRAGSALAAEIGNMKSTEQLSSLEMIGVDPLKYIIAPRLWAGFISLPL 161 Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVA 328 LT++ N I G ++V + + F++ ++ +++ G+IK+ A + +A Sbjct: 162 LTLIFNVVGIWGGAMVAVDWLGVYEGSFWANMQNSVDFHSDVLNGVIKSVVFALVVTWIA 221 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +G+ S + + T VV + V+ +D + F Sbjct: 222 VFQGYDCEPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 263 >gi|195952743|ref|YP_002121033.1| protein of unknown function DUF140 [Hydrogenobaculum sp. Y04AAS1] gi|195932355|gb|ACG57055.1| protein of unknown function DUF140 [Hydrogenobaculum sp. Y04AAS1] Length = 246 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 72/213 (33%), Positives = 120/213 (56%), Gaps = 1/213 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + ++ Y+G VPVV+ S TG V+A Q L +F +E L+++ RE+G +LT Sbjct: 33 VDRVIYIGADTVPVVVTTSLFTGGVLALQTYSTLHKFNSEYLIGALVALSMGRELGPVLT 92 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 ++M+ R GSAI A IG+MK+ E+IDA+ T+ ++ + SP ++A ++ LPLLTIL++ Sbjct: 93 SLMVVARVGSAITASIGTMKVTEQIDALETLAINPYAYITSPILFACMVDLPLLTILSDI 152 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 S IIG +V + + +++ + +I+ GL KA I V+ GF Sbjct: 153 SGIIGGYLVSTIIFHVNGHMYWDKTKEIVDFYDIYGGLYKAFVYGIVIATVSNYFGFKTS 212 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDS-LFAIFY 368 + +G+ T+ VV S +++I+D L AI Y Sbjct: 213 GGNQGVGRATTSSVVISSMLILILDYFLTAIIY 245 >gi|117919131|ref|YP_868323.1| hypothetical protein Shewana3_0679 [Shewanella sp. ANA-3] gi|117611463|gb|ABK46917.1| protein of unknown function DUF140 [Shewanella sp. ANA-3] Length = 261 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 75/222 (33%), Positives = 124/222 (55%), Gaps = 2/222 (0%) Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209 KGF L L+RQ+Y VGV + ++++ G V+A QG L FG E ++++ LR Sbjct: 40 KGFPL-LVRQIYVVGVQSMVIIVVSGLFIGMVLALQGYNILVGFGTEESLGPMVALSLLR 98 Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 E+G ++TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+PL Sbjct: 99 ELGPVVTALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVISMPL 158 Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVA 328 L ++ I G +V ++ I F+S ++ +I LIK+ A + +A Sbjct: 159 LALMFTAVGIYGGHLVGVEWKGIDGGAFWSILQASVEWRQDIVNCLIKSGVFAVVVTWIA 218 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + G+ V + + + T+ VVQS V+ +D L F Sbjct: 219 LYRGYQVVPNPEGISRATTSTVVQSSLAVLALDFLLTALMFG 260 >gi|327479601|gb|AEA82911.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas stutzeri DSM 4166] Length = 265 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 70/222 (31%), Positives = 129/222 (58%), Gaps = 2/222 (0%) Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209 GF L L++Q+Y VGV + +V++ G V+A QG LS +G+E ++++ LR Sbjct: 43 NGFSL-LVKQLYSVGVLSLAIVVVSGIFIGMVLALQGYNILSSYGSEQAVGQMVALTLLR 101 Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 E+G ++TA++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +I+PR+WA ISLPL Sbjct: 102 ELGPVVTALLFAGRAGSALAAEIGNMKSTEQLSSLEMIGVDPLKYIIAPRLWAGFISLPL 161 Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVA 328 LT++ N I G ++V + + F++ ++ +++ G+IK+ A + +A Sbjct: 162 LTLIFNVVGIWGGAMVAVDWLGVYEGSFWANMQNSVDFHSDVLNGVIKSVVFALVVTWIA 221 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +G+ S + + T VV + V+ +D + F Sbjct: 222 VFQGYDCEPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 263 >gi|224827292|ref|ZP_03700385.1| protein of unknown function DUF140 [Lutiella nitroferrum 2002] gi|224600505|gb|EEG06695.1| protein of unknown function DUF140 [Lutiella nitroferrum 2002] Length = 261 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 69/214 (32%), Positives = 121/214 (56%), Gaps = 1/214 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 IR++Y+ GV + ++++ G V+ QG LS+FG+ L+++ LRE+G +L Sbjct: 48 IREVYFAGVLSLIIIVVSGLFVGMVLGLQGYNTLSRFGSADALGALVALSLLRELGPVLA 107 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ A RSGSA+ AEIG MK E++DA+ M ++ + +++PR WA +IS+P+L L N Sbjct: 108 ALLFASRSGSAMTAEIGLMKATEQLDAMSVMAVNPIARVVAPRFWAGVISMPVLAALFNV 167 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFAV 335 + I G V + + F+S+ ++ L N + GLIK+ F A+ ++A+ EG+ Sbjct: 168 TGIFGGYFVGVQLIGLDEGTFWSQMQNSVDLHNDVINGLIKSLFFGIAVTLIAVFEGYDA 227 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + + T VV S +++ +D + F F Sbjct: 228 TPTAAGVSSATTRTVVTSALVILALDFVLTAFMF 261 >gi|85858832|ref|YP_461034.1| organic solvents resistance ABC transporter permease [Syntrophus aciditrophicus SB] gi|85721923|gb|ABC76866.1| ABC-type transport system involved in resistance to organic solvents, permease component [Syntrophus aciditrophicus SB] Length = 259 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 72/207 (34%), Positives = 115/207 (55%), Gaps = 1/207 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +QM +VGV + VV+L TG V+A QG F AE +++ RE+G +LT+ Sbjct: 48 KQMEFVGVKSIFVVVLTGAFTGMVMALQGYHGFKMFSAESLVGATVALGMTRELGPVLTS 107 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +M+ R+GSA+ AE+G+M++ E+IDA+ M + ++ LI PR+ A I+ LPLLT++++F Sbjct: 108 LMVTARAGSAMAAELGTMRVTEQIDALYVMAANPIQHLIVPRMIASILMLPLLTVVSDFV 167 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 I+G V +I VF L +I+ GLIKA + ++ +GF Sbjct: 168 GILGGYFVGVSVLNINEGVFVKNITRIVELGDIYNGLIKAACFGLILSLIGCYKGFHARG 227 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLF 364 + +G+ T VV S SI I++ F Sbjct: 228 GAEGVGRATTEAVVLS-SISILVGDYF 253 >gi|15603974|ref|NP_220489.1| hypothetical protein RP096 [Rickettsia prowazekii str. Madrid E] gi|81554918|sp|Q9ZE51|Y096_RICPR RecName: Full=Probable ABC transporter permease protein RP096 gi|3860665|emb|CAA14566.1| unknown [Rickettsia prowazekii] gi|292571688|gb|ADE29603.1| ABC transporter permease protein [Rickettsia prowazekii Rp22] Length = 259 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 75/231 (32%), Positives = 131/231 (56%), Gaps = 22/231 (9%) Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-RE 210 +L +IRQ+ ++G +PVV + +F +GAV+A Q S+F AE SI + +L L RE Sbjct: 40 YLSLIIRQLLFIGFHSLPVVAMTTFFSGAVLALQSYTGFSRFSAE-NSIATVVVLSLTRE 98 Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 +G +L +++AGR G++I AEI +M++ E++DA+ T+ D ++ L+ PR+ A II++P L Sbjct: 99 LGPVLAGLIVAGRVGASIAAEIATMRVTEQVDALYTLSTDPIKYLVCPRVIAAIITMPCL 158 Query: 271 TILANFSAIIGASIV-IWKYYDIPFAVFFSRFHSTATLANIF---------TGLIKAPFM 320 ++ + ++G +V I+K F+STA L + F +GLIKA Sbjct: 159 VLIGDIIGVMGGYLVGIYKL----------DFNSTAYLTSTFQYLEPIDVISGLIKATVF 208 Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 I I++ G+ G + +G+ T+ VV S +++I + L +F + Sbjct: 209 GFIISIISCYSGYYSGKGAKGVGRATTSAVVNSSILILISNYLITELFFKV 259 >gi|325294995|ref|YP_004281509.1| hypothetical protein Dester_0809 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065443|gb|ADY73450.1| protein of unknown function DUF140 [Desulfurobacterium thermolithotrophum DSM 11699] Length = 260 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 71/216 (32%), Positives = 122/216 (56%), Gaps = 4/216 (1%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 +FK +L Q+ +G +PV+ + S TG VIA + +F AE +++I Sbjct: 39 RFKHYLY----QLASIGTGSLPVIAITSLFTGGVIALETYEAFHRFNAEYMIGGVVAISM 94 Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267 RE+G +LTA++I RSGSA+ AEIG+MK+ E+IDA+R M ++ ++ LI+PR++ +I++ Sbjct: 95 ARELGPVLTALLITARSGSAMAAEIGTMKVTEQIDALRMMAVNPIKYLITPRVYTSVIAV 154 Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327 LLTI+++ IG IV ++I ++ + A + +++ GLIKA I + Sbjct: 155 TLLTIISDIVGYIGGYIVSVVVFNINKTLYIRYTQNLAEMNDVYHGLIKAAIFGFLIATI 214 Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + G+ + +G+ T VV S ++I D L Sbjct: 215 SCLYGYFTKGGAKGVGESTTKAVVVSSISILIFDYL 250 >gi|77361458|ref|YP_341033.1| ABC transporter membrane protein [Pseudoalteromonas haloplanktis TAC125] gi|76876369|emb|CAI87591.1| putative transport protein (ABC superfamily, membrane) [Pseudoalteromonas haloplanktis TAC125] Length = 260 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 74/215 (34%), Positives = 121/215 (56%), Gaps = 1/215 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LIRQ+Y VG + ++++ G V+A QG L +GAE L+++ LRE+G ++ Sbjct: 44 LIRQLYMVGSQSLLIIVVSGLFIGMVLALQGYTVLVGYGAEDSLGPLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D ++ +I+PR WA +IS+PLL ++ + Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAIDPLKRIIAPRFWAGLISMPLLALIFS 163 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334 AIIGA +V + + F+S S + +I G+IK+ A + +A+ +G+ Sbjct: 164 AVAIIGAHLVGVDWLGVDTGSFWSIMQSQVSFQQDILNGIIKSVVFAIVVTWIALYKGYD 223 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 S + K T VV S V+ D L F Sbjct: 224 CVPTSEGISKATTETVVHSSLAVLGFDFLLTAVMF 258 >gi|90580197|ref|ZP_01236004.1| hypothetical protein VAS14_19736 [Vibrio angustum S14] gi|90438499|gb|EAS63683.1| hypothetical protein VAS14_19736 [Vibrio angustum S14] Length = 260 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 71/216 (32%), Positives = 122/216 (56%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q+Y VGV + ++++ G V++ QG L+ FGAE ++++ LRE+G ++ Sbjct: 44 LIKQLYSVGVLSIAIILVSGLFIGMVLSLQGYLVLADFGAETSLGQMVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+PLL ++ + Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVIAPRFWAGVISMPLLALMFS 163 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 + GA IV + I + F+S S+ + +I +IKA A + +A+ G+ Sbjct: 164 VVGLWGAQIVGVDWKGIDYGSFWSVMQSSVNFSYDIGNSIIKAVAFAITVTWIAVFNGYD 223 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV S V+ +D + F Sbjct: 224 AVPTSEGISRATTRTVVNSSLAVLGLDFILTALMFG 259 >gi|113969024|ref|YP_732817.1| hypothetical protein Shewmr4_0680 [Shewanella sp. MR-4] gi|114048831|ref|YP_739381.1| hypothetical protein Shewmr7_3342 [Shewanella sp. MR-7] gi|113883708|gb|ABI37760.1| protein of unknown function DUF140 [Shewanella sp. MR-4] gi|113890273|gb|ABI44324.1| protein of unknown function DUF140 [Shewanella sp. MR-7] Length = 261 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 75/222 (33%), Positives = 124/222 (55%), Gaps = 2/222 (0%) Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209 KGF L L+RQ+Y VGV + ++++ G V+A QG L FG E ++++ LR Sbjct: 40 KGFPL-LVRQIYVVGVQSMVIIVVSGLFIGMVLALQGYNILVGFGTEESLGPMVALSLLR 98 Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 E+G ++TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+PL Sbjct: 99 ELGPVVTALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVISMPL 158 Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVA 328 L ++ I G +V ++ I F+S ++ +I LIK+ A + +A Sbjct: 159 LALMFTAVGIYGGHLVGVEWKGIDGGAFWSILQASVEWRQDIVNCLIKSGVFAVVVTWIA 218 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + G+ V + + + T+ VVQS V+ +D L F Sbjct: 219 LYRGYQVVPNPEGISRATTSTVVQSSLAVLALDFLLTALMFG 260 >gi|226939556|ref|YP_002794629.1| ABC transport system permease protein [Laribacter hongkongensis HLHK9] gi|226714482|gb|ACO73620.1| putative ABC transport system permease protein [Laribacter hongkongensis HLHK9] Length = 371 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 73/206 (35%), Positives = 123/206 (59%), Gaps = 1/206 (0%) Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219 M G +P+V+LI F+ G ++A Q FGA + ++ + I LRE+G L+TA++ Sbjct: 158 MASAGTQALPIVLLIGFLMGTILAFQMGLVAQGFGAGLLVVNGIGIAMLRELGPLMTAIV 217 Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279 AGRSG+A AE+G+ K+NEEI A+ T G+D V L+ PR+ A ++ LPLLT+LA+ + Sbjct: 218 FAGRSGAAFAAELGTQKVNEEIYALHTFGIDPVAFLVLPRLVAAVLVLPLLTVLADVIGL 277 Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339 +G ++V+ + P F+ + +T +L +++ GL K+ I + ++G + G Sbjct: 278 LGGALVMQAFSVTPMQ-FYHQTLATVSLTDLYFGLGKSMVFGLFIAQIGCRQGLSAGQGP 336 Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFA 365 ++G T VV S+ +++ID LFA Sbjct: 337 TAVGVAATRAVVSSLIWIVVIDGLFA 362 >gi|51473253|ref|YP_067010.1| ABC transporter permease protein [Rickettsia typhi str. Wilmington] gi|81390296|sp|Q68XW4|Y041_RICTY RecName: Full=Probable ABC transporter permease protein RT0041 gi|51459565|gb|AAU03528.1| ABC transporter permease protein [Rickettsia typhi str. Wilmington] Length = 259 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 78/221 (35%), Positives = 129/221 (58%), Gaps = 24/221 (10%) Query: 154 LSLI-RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REI 211 LSLI RQ+ ++G +PVV + +F +GAV+A Q S+F AE SI + +L L RE+ Sbjct: 41 LSLIMRQLLFIGFHSLPVVAMTTFFSGAVLALQSYTGFSRFSAE-NSIATVVVLSLTREL 99 Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271 G +L +++AGR G++I AEI +MK+ E++DA+ T+ D ++ L+ PR+ A II++P L Sbjct: 100 GPVLAGLIVAGRVGASIAAEIATMKVTEQVDALYTLSTDPIKYLVCPRVIAAIITMPCLV 159 Query: 272 ILANFSAIIGASIV-IWKYYDIPFAVFFSRFHSTATLANIF---------TGLIKAPFMA 321 ++ + ++G +V I+K F+STA L + F +GL+KA Sbjct: 160 LIGDVIGVMGGYLVGIYKL----------NFNSTAYLTSTFQYLELIDVISGLVKATVFG 209 Query: 322 CAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 I I++ G+ G + +G+ T+ VV S SI+I+I + Sbjct: 210 FIISIISCYSGYYSGKGAKGVGRATTSAVVNS-SILILISN 249 >gi|157828003|ref|YP_001494245.1| ABC transporter permease protein [Rickettsia rickettsii str. 'Sheila Smith'] gi|165932699|ref|YP_001649488.1| ABC transporter permease [Rickettsia rickettsii str. Iowa] gi|157800484|gb|ABV75737.1| ABC transporter permease protein [Rickettsia rickettsii str. 'Sheila Smith'] gi|165907786|gb|ABY72082.1| ABC transporter permease protein [Rickettsia rickettsii str. Iowa] Length = 259 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 78/266 (29%), Positives = 140/266 (52%), Gaps = 13/266 (4%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKG--FLLSLIRQMYYVGVS 166 N+ +GK+ VKF S + F A S + +L +IRQ+ ++G Sbjct: 4 NIANSVGKRTVKFAQSVGSFSLF---------SFAAVSSIIRPPLYLSLIIRQLLFIGFH 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTAVMIAGRSG 225 +PVV + +F +GAV+A Q S+F AE SI + +L L RE+G +L +M+AGR G Sbjct: 55 SLPVVAMTTFFSGAVLALQSYIGFSRFSAES-SIATVVVLSLTRELGPVLAGLMVAGRVG 113 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 ++I AEI +M++ E++DA+ T+ D ++ L+ PR+ II++P L ++ + ++G +V Sbjct: 114 ASIAAEIATMRVTEQVDALYTLSTDPIKYLVFPRVITAIITMPCLVLIGDIIGVMGGYLV 173 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 D A + + ++ +GL+KA I I++ G+ G + +G+ Sbjct: 174 GVYKLDFNSAAYLTSTFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRA 233 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAI 371 T+ VV S +++I + L +F + Sbjct: 234 TTSAVVNSSILILISNYLITELFFKV 259 >gi|24375440|ref|NP_719483.1| hypothetical protein SO_3953 [Shewanella oneidensis MR-1] gi|24350284|gb|AAN56927.1|AE015826_12 conserved hypothetical protein TIGR00056 [Shewanella oneidensis MR-1] Length = 261 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 75/222 (33%), Positives = 124/222 (55%), Gaps = 2/222 (0%) Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209 KGF L L+RQ+Y VGV + ++++ G V+A QG L FG E ++++ LR Sbjct: 40 KGFPL-LVRQIYVVGVQSMVIIVVSGLFIGMVLALQGYNILVGFGTEESLGPMVALSLLR 98 Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 E+G ++TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+PL Sbjct: 99 ELGPVVTALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVISMPL 158 Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVA 328 L ++ I G +V ++ I F+S ++ +I LIK+ A + +A Sbjct: 159 LALMFTAVGIYGGHLVGVEWKGIDSGAFWSILQASVEWRQDIVNCLIKSGVFAVVVTWIA 218 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + G+ V + + + T+ VVQS V+ +D L F Sbjct: 219 LYRGYQVIPNPEGISRATTSTVVQSSLAVLALDFLLTALMFG 260 >gi|328953206|ref|YP_004370540.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM 11109] gi|328453530|gb|AEB09359.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM 11109] Length = 256 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 73/261 (27%), Positives = 138/261 (52%), Gaps = 7/261 (2%) Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167 K+L +G+ + FI ++ L G F YK +L++Q+Y +GV Sbjct: 2 KDLLRTLGRATIDFIQEAGRMQLFL---FQTLGLFFLPPYK----PFNLVKQVYVIGVRS 54 Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +++L + TG V+ QG + L +FGAE +++ +RE+G +LTA+M+ GR+GSA Sbjct: 55 SSIILLTAMFTGMVLGLQGYYTLRKFGAESALGSAVALSLIRELGPVLTALMVTGRAGSA 114 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I AEIG M+I E++DA+ TM ++ ++ ++ P++ A +I++PLLT +F I+G +V Sbjct: 115 ITAEIGIMRITEQLDALDTMAINPMQYVVMPKVIAGLIAVPLLTAFFDFVGIVGGYLVGV 174 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + +FS + ++ G +K+ + +VA +G+ + + + T Sbjct: 175 VMLGVSSGSYFSGMIQSVETLDVNGGFVKSIVFGLTVTLVACYKGYFTSHGAEGVSQSTT 234 Query: 348 TCVVQSISIVIIIDSLFAIFY 368 VV + +++ D + F+ Sbjct: 235 EAVVLAAILILGWDYVLTSFF 255 >gi|152999232|ref|YP_001364913.1| hypothetical protein Shew185_0693 [Shewanella baltica OS185] gi|160873845|ref|YP_001553161.1| hypothetical protein Sbal195_0723 [Shewanella baltica OS195] gi|217971905|ref|YP_002356656.1| hypothetical protein Sbal223_0714 [Shewanella baltica OS223] gi|304411204|ref|ZP_07392819.1| protein of unknown function DUF140 [Shewanella baltica OS183] gi|307306499|ref|ZP_07586242.1| protein of unknown function DUF140 [Shewanella baltica BA175] gi|151363850|gb|ABS06850.1| protein of unknown function DUF140 [Shewanella baltica OS185] gi|160859367|gb|ABX47901.1| protein of unknown function DUF140 [Shewanella baltica OS195] gi|217497040|gb|ACK45233.1| protein of unknown function DUF140 [Shewanella baltica OS223] gi|304350397|gb|EFM14800.1| protein of unknown function DUF140 [Shewanella baltica OS183] gi|306910790|gb|EFN41218.1| protein of unknown function DUF140 [Shewanella baltica BA175] gi|315266072|gb|ADT92925.1| protein of unknown function DUF140 [Shewanella baltica OS678] Length = 261 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 76/222 (34%), Positives = 123/222 (55%), Gaps = 2/222 (0%) Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209 KGF L L+RQ+Y VGV + ++++ G V+A QG L FG E ++++ LR Sbjct: 40 KGFPL-LVRQIYVVGVQSMVIILVSGLFIGMVLALQGYNILVGFGTEESLGPMVALSLLR 98 Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 E+G ++TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+PL Sbjct: 99 ELGPVVTALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVISMPL 158 Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVA 328 L ++ I G IV ++ I F+S ++ +I LIK+ A + +A Sbjct: 159 LALMFTAVGIYGGHIVGVEWKGIDSGAFWSILQASVEWRQDIVNCLIKSGVFAVVVTWIA 218 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + G+ V + + + T VVQS V+ +D L F Sbjct: 219 LYRGYQVIPNPEGISRATTQTVVQSSLAVLALDFLLTALMFG 260 >gi|126175856|ref|YP_001052005.1| hypothetical protein Sbal_3661 [Shewanella baltica OS155] gi|125999061|gb|ABN63136.1| protein of unknown function DUF140 [Shewanella baltica OS155] Length = 261 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 76/222 (34%), Positives = 123/222 (55%), Gaps = 2/222 (0%) Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209 KGF L L+RQ+Y VGV + ++++ G V+A QG L FG E ++++ LR Sbjct: 40 KGFPL-LVRQIYVVGVQSMVIILVSGLFIGMVLALQGYNILVGFGTEESLGPMVALSLLR 98 Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 E+G ++TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+PL Sbjct: 99 ELGPVVTALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVISMPL 158 Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVA 328 L ++ I G IV ++ I F+S ++ +I LIK+ A + +A Sbjct: 159 LALMFTAVGIYGGHIVGVEWKGIDSGAFWSILQASVEWRQDIVNCLIKSGVFAVVVTWIA 218 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + G+ V + + + T VVQS V+ +D L F Sbjct: 219 LYRGYQVIPNPEGISRATTQTVVQSSLAVLALDFLLTALMFG 260 >gi|89075259|ref|ZP_01161686.1| hypothetical protein SKA34_22619 [Photobacterium sp. SKA34] gi|89048940|gb|EAR54508.1| hypothetical protein SKA34_22619 [Photobacterium sp. SKA34] Length = 260 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 71/216 (32%), Positives = 122/216 (56%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q+Y VGV + ++I+ G V++ QG L+ FGAE ++++ LRE+G ++ Sbjct: 44 LIKQLYSVGVLSIAIIIVSGLFIGMVLSLQGYLVLAGFGAETSLGQMVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+PLL ++ + Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVIAPRFWAGVISMPLLALMFS 163 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 + GA +V + I + F+S S+ + +I +IKA A + +A+ G+ Sbjct: 164 VVGLWGAQVVGVDWKGIDYGSFWSVMQSSVNFSYDIGNSIIKAVAFAITVTWIAVFNGYD 223 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV S V+ +D + F Sbjct: 224 AVPTSEGISRATTRTVVNSSLAVLGLDFILTALMFG 259 >gi|253995674|ref|YP_003047738.1| hypothetical protein Mmol_0301 [Methylotenera mobilis JLW8] gi|253982353|gb|ACT47211.1| protein of unknown function DUF140 [Methylotenera mobilis JLW8] Length = 267 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 77/268 (28%), Positives = 143/268 (53%), Gaps = 8/268 (2%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 N F +G +++ I + A + L I+ +GE F+ F L+L R++Y+ G Sbjct: 7 NMFSRFLSGVGNRMIARIWRLGAGARLFMLAIAYSGE------SFRRFHLTL-REVYFTG 59 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V + ++I+ +F G V+A QG L ++G+ L+++ +RE+G ++TA++ AGR+ Sbjct: 60 VMSLLIIIVSAFFVGMVLALQGYNTLQKYGSSEAIGVLVALALVRELGPVVTALLFAGRA 119 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 G+AI AEIG MK E++ A+ M ++ + +++PR WA +IS+P+L L + ++G + Sbjct: 120 GTAITAEIGLMKTTEQLSAMEMMAVNPIARVVAPRFWAGVISMPILAALFSMVGVLGGYL 179 Query: 285 VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 V + F+S+ + + A+I G+IK+ A ++A+ EGF + + Sbjct: 180 VAVPLIGVDDGAFWSQMQANVDVRADIINGVIKSVVFGVACTMIALFEGFDAPPTAEGVS 239 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFAI 371 T VV S V+ +D + F + Sbjct: 240 HATTRTVVISSLTVLFLDFVLTSFMLVV 267 >gi|157825268|ref|YP_001492988.1| ABC transporter permease protein [Rickettsia akari str. Hartford] gi|157799226|gb|ABV74480.1| ABC transporter permease protein [Rickettsia akari str. Hartford] Length = 259 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 81/280 (28%), Positives = 148/280 (52%), Gaps = 41/280 (14%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEF-------CASSYKFKGFLLSLIRQMY 161 N+ +GK+ +K C+Q + G F +S+ + +L +IRQ+ Sbjct: 4 NIANLVGKRTIK-----CAQ---------SVGSFSLFSFAAVSSTIRPPLYLSLIIRQLL 49 Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTAVMI 220 ++G +PVV + +F +GAV+A Q S+F AE SI + +L L RE+G +L +M+ Sbjct: 50 FIGFHSLPVVAMTTFFSGAVLALQSYTGFSRFSAE-NSIATVVVLSLTRELGPVLAGLMV 108 Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280 +GR G++I AEI +M++ E++DA+ T+ D ++ L+ PR+ A I+++P L ++ + ++ Sbjct: 109 SGRVGASIAAEIATMRVTEQVDALYTLSTDPIKYLVFPRVIATIVTMPCLVLIGDIIGVM 168 Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLA---------NIFTGLIKAPFMACAIGIVAMKE 331 G +V V+ F+STA L ++ +GL+KA I I++ Sbjct: 169 GGYLV---------GVYKLDFNSTAYLTSTLHYLEPIDVISGLVKAGVFGFIISIISCYS 219 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 G+ G + +G+ T+ VV S I++I + L +F + Sbjct: 220 GYYSGKGAKGVGRATTSAVVNSSIIILISNYLITELFFKV 259 >gi|51246140|ref|YP_066024.1| toluene ABC-transporter, permease protein [Desulfotalea psychrophila LSv54] gi|50877177|emb|CAG37017.1| related to toluene ABC-transporter, permease protein [Desulfotalea psychrophila LSv54] Length = 262 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 78/244 (31%), Positives = 133/244 (54%), Gaps = 20/244 (8%) Query: 136 ISNTGEFC-------ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 ++N G FC ++ + ++ ++++G + VVIL F TG V+A QG + Sbjct: 17 VTNLGRFCLFLLTGIGQIFQKPFQIFRIVENIWFIGTKSMAVVILTGFFTGMVLALQGYY 76 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L++FG+ +++ +RE+G +LTA+MI R+GSA+ AEIG+M+I+E++DA++TM Sbjct: 77 ALAKFGSAGMLGSAVALTLIRELGPVLTAIMITARAGSAMAAEIGTMRISEQLDALQTMD 136 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ V+ + SPR+ A II PLLT + + I G + I + ++ R H + + Sbjct: 137 INPVKFVFSPRLIASIICFPLLTSIFDVVGIFGG-LFIATTLKVNGYIYMYRVHESVVME 195 Query: 309 NIFTGLIKAPFMA-------CAIGIVA--MKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 +I +G+IK+ A C G A KEG G S ++ T VV S +++I Sbjct: 196 DIRSGIIKSLVFAVVVVSTCCFKGYYAHIQKEG---GFGSRAVSLATTNAVVSSSVLILI 252 Query: 360 IDSL 363 D L Sbjct: 253 YDYL 256 >gi|291287315|ref|YP_003504131.1| hypothetical protein Dacet_1405 [Denitrovibrio acetiphilus DSM 12809] gi|290884475|gb|ADD68175.1| protein of unknown function DUF140 [Denitrovibrio acetiphilus DSM 12809] Length = 256 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 66/214 (30%), Positives = 120/214 (56%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q+ ++G + + V+IL TG V A Q +FGAE ++++ RE+G +L Sbjct: 43 LIKQIEFIGANSLSVIILTGSFTGMVFAFQSYIGFHKFGAEQIVGTVVALGMARELGPVL 102 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 +A+M+A R+GSAI AEIG+MK+ E++DA+ + +D V+ L PRI A +I +P+L +A Sbjct: 103 SAIMVAARAGSAITAEIGTMKVTEQVDALNALAVDPVQYLFVPRILAGLIVMPMLNAIAV 162 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 F ++G +V I ++ + + ++ F+G++KA + +V +G+ Sbjct: 163 FCGMVGGFLVSITVLGINKTLYLNYMYQYIEFSDFFSGMVKAFVFGGIVTLVGCYKGYMT 222 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +GK T VV + ++++ D + F F Sbjct: 223 TGGAEGVGKSTTESVVLACILILVFDYILTAFMF 256 >gi|52425767|ref|YP_088904.1| hypothetical protein MS1712 [Mannheimia succiniciproducens MBEL55E] gi|52307819|gb|AAU38319.1| unknown [Mannheimia succiniciproducens MBEL55E] Length = 260 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 69/217 (31%), Positives = 121/217 (55%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q+Y +GV + +++L F G V+ QG L F AE L+++ LRE+G ++ Sbjct: 44 LIKQLYVLGVQSLLIILLSGFFIGMVLGLQGYVILVDFAAEANVGQLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +I++P+LT+L Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPVLTVLFT 163 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 IIG ++ ++ I F+S + +++ G IK+ A + +A+ G+ Sbjct: 164 AVGIIGGHLIGVEWKGIDSGSFWSVMQNAVRTLDLWDGFIKSLVFAFTVTWIALFNGYDC 223 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 S + + T VV + +V+ +D + F G Sbjct: 224 IPTSEGISQATTRTVVNASLLVLGLDFVLTAIMFGAG 260 >gi|118579001|ref|YP_900251.1| hypothetical protein Ppro_0562 [Pelobacter propionicus DSM 2379] gi|118501711|gb|ABK98193.1| protein of unknown function DUF140 [Pelobacter propionicus DSM 2379] Length = 256 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 65/206 (31%), Positives = 118/206 (57%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +++Q+ ++G + V+ L + TG V+ QG + L++FG+E +++ +RE+G +L Sbjct: 43 VLKQLSFIGAKSLFVIFLTAAFTGMVLGLQGYYTLTKFGSEGMLGTAVALSLIRELGPVL 102 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA+M+ GR+GSAI AEIG M+I E+IDA+ TM LD + LI+P++ A +I+LPLL + + Sbjct: 103 TALMVTGRAGSAIAAEIGIMRITEQIDALETMALDPFKYLITPKLIAAMIALPLLCAIFD 162 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I G +V K + +FS + ++++G K+ I + +G+ Sbjct: 163 TIGIYGGWLVGVKLLGVNPGAYFSEMEKSVVWRDVYSGFAKSFSFGVIIAWIGCYKGYFA 222 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361 G + + K T VV + ++++ D Sbjct: 223 GHGAEGVSKATTEAVVLTSVLILVWD 248 >gi|294139194|ref|YP_003555172.1| hypothetical protein SVI_0423 [Shewanella violacea DSS12] gi|293325663|dbj|BAJ00394.1| conserved hypothetical protein [Shewanella violacea DSS12] Length = 258 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 74/224 (33%), Positives = 123/224 (54%), Gaps = 2/224 (0%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 + KGF L ++Q+Y VGV + ++++ G V+A QG L FG E ++++ Sbjct: 35 RLKGFSL-FVKQLYVVGVQSMVLILISGLFIGMVLALQGYNILVGFGTEESLGPMVALSL 93 Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267 LRE+G ++TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA ++SL Sbjct: 94 LRELGPVVTALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVVSL 153 Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGI 326 PLLT++ I G +V ++ I F+S ++ +I LIK+ + Sbjct: 154 PLLTLMFTAVGIYGGHLVGVEWKGIDSGSFWSILQASVEWRQDIVNCLIKSFLFGIVVTW 213 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +A+ G+ V + + K T VVQS V+ +D L F Sbjct: 214 IALYRGYQVTPNPEGISKATTQTVVQSSLAVLALDFLLTALMFG 257 >gi|294669772|ref|ZP_06734838.1| hypothetical protein NEIELOOT_01672 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308338|gb|EFE49581.1| hypothetical protein NEIELOOT_01672 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 258 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 81/263 (30%), Positives = 144/263 (54%), Gaps = 10/263 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 NL +G K + FI S L +++++G S +F+ LS +RQ+Y+ GV V Sbjct: 2 NLIRTVGAKTLGFIQALGSVCLFLLQILAHSGT---SLLRFR---LS-VRQVYFAGVLSV 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 ++ + G V+ QG QL++F A+I + + L LRE+G +L A++ A +G A Sbjct: 55 LIIAVSGLFVGMVLGLQGYTQLAKFKSADILGYMVAASL-LRELGPVLAAILFASSAGGA 113 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + +EIG MK E+++A+ M ++ V +++PR WA + S+PLL + N + I GA +V Sbjct: 114 MTSEIGLMKATEQLEAMNVMAINPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGV 173 Query: 288 KYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 ++ + +F+S+ + + ++ GLIK+ F A+ ++A+ +GF S + + Sbjct: 174 QWLGLDGGIFWSQMQNNISFGYDVLNGLIKSAFFGVAVTLIAVHQGFHALPTSEGILRAS 233 Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369 T VV S +V+ ID + F F Sbjct: 234 TRTVVSSALVVLAIDFILTAFMF 256 >gi|119469173|ref|ZP_01612157.1| putative transport protein (ABC superfamily, membrane) [Alteromonadales bacterium TW-7] gi|119447425|gb|EAW28693.1| putative transport protein (ABC superfamily, membrane) [Alteromonadales bacterium TW-7] Length = 259 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 70/199 (35%), Positives = 116/199 (58%), Gaps = 1/199 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y VG + ++++ G V+A QG L +GAE L+++ LRE+G ++ Sbjct: 43 LVRQLYMVGSQSLLIIMVSGLFIGMVLALQGYTVLVGYGAEDSLGPLVALSLLRELGPVV 102 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D ++ +I+PR WA IS+PLL I+ + Sbjct: 103 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAIDPLKRIIAPRFWAGFISMPLLAIIFS 162 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334 AIIGA +V + + F+S S + A++ G+IK+ A + +A+ +G+ Sbjct: 163 AVAIIGAHLVGVDWLGVDTGSFWSIMQSQVSFQADVLNGIIKSFVFAIVVTWIALYKGYD 222 Query: 335 VGVHSNSLGKKVTTCVVQS 353 S + K T VV S Sbjct: 223 CVPTSEGISKATTETVVHS 241 >gi|39996998|ref|NP_952949.1| transporter [Geobacter sulfurreducens PCA] gi|39983886|gb|AAR35276.1| transporter, putative [Geobacter sulfurreducens PCA] gi|298506015|gb|ADI84738.1| transporter membrane protein of unknown function DUF140 [Geobacter sulfurreducens KN400] Length = 257 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 66/211 (31%), Positives = 117/211 (55%), Gaps = 2/211 (0%) Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 L S+ QM +G VP+ +++F G V+A Q +L ++G + ++ + +RE+G Sbjct: 39 LPSIFNQMAIIGYETVPIASVMAFFVGMVLALQTGVELQKYGTQNIIGGIVGLSMVRELG 98 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 ++T+ ++AGR GSA+ AEIG MK+ EEIDA++T+ ++ VR L PR+ A ++ +P L I Sbjct: 99 PVMTSFLVAGRVGSAMAAEIGVMKVYEEIDALKTLDINPVRYLAMPRLIACLVCVPALVI 158 Query: 273 LANFSAIIGASIVIWKYYD--IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330 AN I+G +I+ + I ++ ++ + L + GL+KA I +VA Sbjct: 159 FANAVGIVGGAIMSHLHPKIFISYSTYYDSLKTALKLKEVGAGLVKATVFGGIIALVACY 218 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 GF + + + T VV S ++++ D Sbjct: 219 TGFKTSGGARGIAQATTRAVVLSFMLILVAD 249 >gi|257465526|ref|ZP_05629897.1| permease [Actinobacillus minor 202] gi|257451186|gb|EEV25229.1| permease [Actinobacillus minor 202] Length = 260 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 67/206 (32%), Positives = 118/206 (57%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q+Y VGV + +++L G V+ QG L F AE L+S+ LRE+G ++ Sbjct: 43 LIKQLYVVGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFAAETSLGTLVSLSLLRELGPVV 102 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+P+L ++ Sbjct: 103 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRIIAPRFWAGVISMPILAVIFT 162 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I G S+V + + F+S ++ + +++ G IK+ A A+ +A+ G+ Sbjct: 163 AIGIWGGSLVGVDWKGVDSGSFWSVMQNSVSASDLINGFIKSIIFAFAVVWIALFNGYDS 222 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361 S + + T VV + +++ +D Sbjct: 223 TATSEGISQATTKTVVNASLVILGLD 248 >gi|219870961|ref|YP_002475336.1| resistance to organic solvents ABC transporter permease [Haemophilus parasuis SH0165] gi|219691165|gb|ACL32388.1| ABC-type transport system involved in resistance to organic solvents, permease component [Haemophilus parasuis SH0165] Length = 257 Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 71/216 (32%), Positives = 121/216 (56%), Gaps = 4/216 (1%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I+Q++ +GV + +++L G V+ QG L F AE L+S+ LRE+G ++T Sbjct: 43 IKQLHVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVSLSLLRELGPVVT 102 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA II++P+L ++ Sbjct: 103 ALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGIIAMPILAVIFTA 162 Query: 277 SAIIGASI--VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 I G S+ V WK D+ F+S ST T+ ++ G IK+ A A+ +A+ G+ Sbjct: 163 IGIWGGSLVGVDWKGVDV--GSFWSVMQSTVTMGDLLNGFIKSIVFAFAVVWIALFNGYD 220 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + +++ +D + F Sbjct: 221 ALPTSEGISQATTRTVVHASLVILGLDFILTAIMFG 256 >gi|254513828|ref|ZP_05125889.1| ABC transporter permease protein [gamma proteobacterium NOR5-3] gi|219676071|gb|EED32436.1| ABC transporter permease protein [gamma proteobacterium NOR5-3] Length = 369 Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 97/338 (28%), Positives = 175/338 (51%), Gaps = 19/338 (5%) Query: 42 VDLSAITEIDT-IGAELIMYFMEKYHGKIKLQ--GVSTHIEQLFSLISFTHRKKIKNQKP 98 VD++++T D + A+L+ Y G+ +L+ G QLF L + Sbjct: 45 VDVTSVTVWDPRLEAKLLHLQRLAYAGQRQLELLGTPDSQTQLFKLATAVAPYAGTAATS 104 Query: 99 QRSFFYNSFKNLHYHIGKKIVK---FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLS 155 F + ++ IG +++ F+ + S +L ++ +G + + F+ S Sbjct: 105 SGLFTLKNLRSTLADIGDDLLESLEFLGATTS--AVLRTLLGRSG------MRRREFIES 156 Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L + G + ++ L S + G ++A GA QL QFGA +F DL++I LRE+G L+ Sbjct: 157 LAQ----AGPQAMGIITLTSVLVGMILAYLGAAQLQQFGAAVFVADLVAIGMLREMGALM 212 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA+++AGR+G+A A++ +M+ NEEIDAI T+G++ + L+ PR+ AL++ +PLL + A+ Sbjct: 213 TAIVMAGRTGAAYAAQLSTMQTNEEIDAITTLGINPLEFLVVPRMLALLLMMPLLVVYAD 272 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I+G ++V P + S+ S T+ + G++K A I I + G Sbjct: 273 ALGIVGGAVVAGGMGVTPLQ-YISQLDSAITITHFLVGVVKGLIFALLIAIAGCRAGMNA 331 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 G +S ++G+ T VV ++ +I+ D+ I +GI Sbjct: 332 GRNSEAVGRATTEAVVTAVVYLIVADAAINILCQLLGI 369 >gi|114332197|ref|YP_748419.1| hypothetical protein Neut_2236 [Nitrosomonas eutropha C91] gi|114309211|gb|ABI60454.1| protein of unknown function DUF140 [Nitrosomonas eutropha C91] Length = 381 Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 94/383 (24%), Positives = 193/383 (50%), Gaps = 34/383 (8%) Query: 2 SENGITVFRFAGNWK----SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAEL 57 +E G + + G++ +P + +A ++ ++ DL+ I ++D GA + Sbjct: 18 TEAGNSCLQLTGSYTLVSLNPSLPAVARELAQLASQP----GLYWDLTNIHQLDYAGAVM 73 Query: 58 IMY-FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP-QRSFFYNSFKNLHYHIG 115 + + E+ + L+ EQ+F + K + +P QR +F +G Sbjct: 74 LWQIWGEQRPDHLLLR---PEQEQMFQRL----EKVVSLPEPTQRKWFLPVSL-----LG 121 Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCAS-----SYKFKGFLLSLIRQMYYVGVSGVPV 170 +++++F + H+ G+ IS +G+ ++ + + + +Y G + + Sbjct: 122 QQLLRFFD------HLAGM-ISLSGQIVLDIVYLMTHPSRIPVREISANLYRTGAQALGI 174 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 ++ F+ G V++ + QL GA+I+ ++++ + +RE+G +L A+++AGRSGSA+ A Sbjct: 175 TAIVGFLIGIVLSYLSSEQLHMLGADIYIVNILGMSIIRELGPMLAAILVAGRSGSAMTA 234 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 ++G M++ EE+DA+ MG+ L+ +I L ++LPL+ + + A++G + Sbjct: 235 QLGVMRVTEELDALTVMGIPHSLRLVLSKIIGLSLALPLIVLWTSSVALLGGLLAADLQV 294 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 + + +AN++ GL K AI ++A G + ++ SLG+ T V Sbjct: 295 GLSIRYAVTTLPDAVPIANLWLGLGKGVVCGMAIALIACHFGLRIKPNTESLGEGTTNSV 354 Query: 351 VQSISIVIIIDSLFAIFYFAIGI 373 V SI+ VIIID++FA+ + +IGI Sbjct: 355 VTSITAVIIIDAIFAVAFSSIGI 377 >gi|240948315|ref|ZP_04752701.1| permease [Actinobacillus minor NM305] gi|240297354|gb|EER47895.1| permease [Actinobacillus minor NM305] Length = 258 Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 68/215 (31%), Positives = 120/215 (55%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q+Y VGV + +++L G V+ QG L F AE L+S+ LRE+G ++ Sbjct: 43 LIKQLYVVGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFAAETSLGTLVSLSLLRELGPVV 102 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+P+L ++ Sbjct: 103 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRIIAPRFWAGVISMPILAVIFT 162 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I G S+V + + F+S ++ + +++ G IK+ A A+ +A+ G+ Sbjct: 163 AIGIWGGSLVGVDWKGVDSGSFWSVMQNSVSASDLINGFIKSIIFAFAVVWIALFNGYDS 222 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + +++ +D + F Sbjct: 223 TATSEGISQATTKTVVNASLVILGLDFILTAIMFG 257 >gi|239904657|ref|YP_002951395.1| putative ABC transporter permease protein [Desulfovibrio magneticus RS-1] gi|239794520|dbj|BAH73509.1| putative ABC transporter permease protein [Desulfovibrio magneticus RS-1] Length = 256 Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 66/208 (31%), Positives = 119/208 (57%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I + +VG + +V +I+ G +++ Q A QL + GA + +L+ + E+G LLT Sbjct: 41 ISHLAWVGADSLAIVSVIAACVGIILSLQAAIQLEKVGAMSYVANLVGFSLVTELGPLLT 100 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 ++++GR+G+A AEI +M+I+EEIDA+ MG+D VR L+ P+ A+ + PLLT+ A+ Sbjct: 101 CLILSGRAGAAFTAEIATMRISEEIDALAVMGIDPVRFLVWPKFVAMAVMAPLLTLWADA 160 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 I I + V+F++ ++ +GL+K+ AI +++ +GF Sbjct: 161 VGITAGGIFSSLALGLSGKVYFNQIAYFLGFKDLLSGLVKSAGFGVAITVISCWQGFLAR 220 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + +G++ T VVQSI ++I++D F Sbjct: 221 EGAADVGRRTTAAVVQSIFVMILLDLFF 248 >gi|167854684|ref|ZP_02477464.1| hypothetical protein HPS_01292 [Haemophilus parasuis 29755] gi|167854221|gb|EDS25455.1| hypothetical protein HPS_01292 [Haemophilus parasuis 29755] Length = 258 Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 71/216 (32%), Positives = 121/216 (56%), Gaps = 4/216 (1%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I+Q++ +GV + +++L G V+ QG L F AE L+S+ LRE+G ++T Sbjct: 44 IKQLHVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVSLSLLRELGPVVT 103 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA II++P+L ++ Sbjct: 104 ALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGIIAMPILAVIFTA 163 Query: 277 SAIIGASI--VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 I G S+ V WK D+ F+S ST T+ ++ G IK+ A A+ +A+ G+ Sbjct: 164 IGIWGGSLVGVDWKGVDV--GSFWSVMQSTVTMGDLLNGFIKSIVFAFAVVWIALFNGYD 221 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + +++ +D + F Sbjct: 222 ALPTSEGISQATTRTVVHASLVILGLDFILTAIMFG 257 >gi|315635512|ref|ZP_07890778.1| ABC superfamily ATP binding cassette transporter, permease protein [Arcobacter butzleri JV22] gi|315480270|gb|EFU70937.1| ABC superfamily ATP binding cassette transporter, permease protein [Arcobacter butzleri JV22] Length = 285 Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 60/135 (44%), Positives = 85/135 (62%), Gaps = 4/135 (2%) Query: 142 FCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSID 201 F S +FK +++ + + +V + SF+ G VIA QG+ QL +FGA IF ++ Sbjct: 143 FNPSKIRFKA----MLKYIETSAFDALLIVAVTSFLVGVVIAYQGSVQLEKFGANIFIVE 198 Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261 ++SI REI L+TA++IAGRS S+ AEIG+MKI EEIDA++TM + L PRI+ Sbjct: 199 MISITMFREIAPLVTAIVIAGRSASSYTAEIGAMKITEEIDAMKTMNFEPTLFLTLPRIF 258 Query: 262 ALIISLPLLTILANF 276 AL ISLPLL + Sbjct: 259 ALCISLPLLVFFCRY 273 >gi|238650558|ref|YP_002916410.1| ABC transporter permease protein [Rickettsia peacockii str. Rustic] gi|238624656|gb|ACR47362.1| ABC transporter permease protein [Rickettsia peacockii str. Rustic] Length = 259 Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 77/266 (28%), Positives = 140/266 (52%), Gaps = 13/266 (4%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKG--FLLSLIRQMYYVGVS 166 N+ +GK+ VKF S + F A S + +L +IRQ+ ++G Sbjct: 4 NIANSVGKRTVKFAQSVGSFSLF---------SFAAVSSIIRPPLYLSLIIRQLLFIGFH 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTAVMIAGRSG 225 +PVV + +F +GAV+A Q S+F AE SI + +L L RE+G +L +M+AGR G Sbjct: 55 SLPVVAMTTFFSGAVLALQSYIGFSRFSAES-SIATVVVLSLTRELGPVLAGLMVAGRVG 113 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 ++I AEI +M++ E++DA+ T+ D ++ L+ PR+ II++P L ++ + ++G +V Sbjct: 114 ASIAAEIATMRVTEQVDALYTLSTDPIKYLVFPRVITAIITMPCLVLIGDIIGVMGGYLV 173 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 D A + + ++ +GL+KA I I++ G+ G + +G+ Sbjct: 174 GVYKLDFNSAAYLTSTFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRA 233 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAI 371 T+ VV + +++I + L +F + Sbjct: 234 TTSAVVNASILILISNYLITELFFKV 259 >gi|302185305|ref|ZP_07261978.1| putative ABC transport system permease protein [Pseudomonas syringae pv. syringae 642] Length = 265 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 66/216 (30%), Positives = 126/216 (58%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y VGV + ++++ G V+A QG L+++G+E ++++ LRE+G ++ Sbjct: 48 LVRQLYSVGVMSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVV 107 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA ISLP+L ++ + Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFS 167 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFA 334 I GAS V + + F+S ++ + N + G+IK+ A + +A+ +G+ Sbjct: 168 VVGIWGASWVAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYD 227 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 228 CDPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 263 >gi|78357340|ref|YP_388789.1| hypothetical protein Dde_2297 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219745|gb|ABB39094.1| Protein of unknown function DUF140 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 270 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 68/217 (31%), Positives = 123/217 (56%), Gaps = 5/217 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +++Q+Y++G + V+ LI TG V+ QG + L +FG+E +++ +RE+G +L Sbjct: 52 VVQQVYFIGSKSLFVIALIGIFTGMVLGLQGYYTLVKFGSEGLLGAAVALTLIRELGPVL 111 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA+M+ GR+GSA+ AEIG M+I+++IDA+ M + + L++PR+ A +I P+LT L N Sbjct: 112 TAIMVTGRAGSAMAAEIGVMRISDQIDALEVMDVPPMGYLVTPRLLASLIVFPMLTALFN 171 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 IIG + I V+F R S+ +++ G +K A + I++ +G+ Sbjct: 172 TIGIIGGYLTGVVLLGINSGVYFYRIDSSVGWSDVSGGFLKTMVFAVIVSIISCYQGYFT 231 Query: 336 GVHSNSLGKK-----VTTCVVQSISIVIIIDSLFAIF 367 + + +G + T+ VV S +V++ D + F Sbjct: 232 HMRKDGMGPEGVSNSTTSAVVMSCVLVLVSDYVLTSF 268 >gi|330446812|ref|ZP_08310463.1| mlaE [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491003|dbj|GAA04960.1| mlaE [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 260 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 127/232 (54%), Gaps = 2/232 (0%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G + K F L L++Q+Y VGV + ++++ G V++ QG L+ FGAE Sbjct: 29 GALVSKPQPVKMFPL-LMKQLYSVGVLSMAIILVSGLFIGMVLSLQGYIVLADFGAETSL 87 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR Sbjct: 88 GQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVIAPR 147 Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAP 318 WA +IS+PLL ++ + + GA IV + I + F+S S+ + +I +IKA Sbjct: 148 FWAGVISMPLLALMFSVVGLWGAQIVGVDWKGIDYGSFWSVMQSSVNFSYDIGNSIIKAV 207 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 A + +A+ G+ S + + T VV S V+ +D + F Sbjct: 208 VFAITVTWIAVFNGYDAVPTSEGISRATTRTVVNSSLAVLGLDFILTALMFG 259 >gi|126663828|ref|ZP_01734823.1| ABC transporter, permease [Flavobacteria bacterium BAL38] gi|126624092|gb|EAZ94785.1| ABC transporter, permease [Flavobacteria bacterium BAL38] Length = 261 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 71/221 (32%), Positives = 120/221 (54%), Gaps = 4/221 (1%) Query: 141 EFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSI 200 EF Y+FK FL RQ Y++G + +V + F+ G V Q L +FGA + Sbjct: 32 EFWKPPYEFKEFL----RQCYFIGNRSLFLVGVTGFIIGLVFTLQSRPTLQEFGAVSWMA 87 Query: 201 DLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRI 260 ++S+ +REIG ++TA++ AGR GS I AE+GSMK+ E+IDA+ G + + L+ RI Sbjct: 88 SMVSVSIIREIGPIITALICAGRIGSGIGAELGSMKVTEQIDAMEVSGTNPFKYLVITRI 147 Query: 261 WALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320 A + LPLL I + AI G+ +V ++ F ++F++ + +++ +K F Sbjct: 148 LATSLMLPLLVIFGDVLAIYGSYLVENVKDNVSFQLYFNQVFNILEFSDLIPATLKTFFF 207 Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 AIG++ +G+ + +GK VV + ++ +ID Sbjct: 208 GFAIGLIGCYKGYYCKKGTAGVGKAANEAVVYTSMLLFVID 248 >gi|330950264|gb|EGH50524.1| hypothetical protein PSYCIT7_02422 [Pseudomonas syringae Cit 7] Length = 265 Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 66/216 (30%), Positives = 126/216 (58%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y VGV + ++++ G V+A QG L+++G+E ++++ LRE+G ++ Sbjct: 48 LVRQLYSVGVMSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVV 107 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA ISLP+L ++ + Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFS 167 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFA 334 I GAS V + + F+S ++ + N + G+IK+ A + +A+ +G+ Sbjct: 168 VVGIWGASWVAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYD 227 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 228 CEPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 263 >gi|283779915|ref|YP_003370670.1| hypothetical protein Psta_2136 [Pirellula staleyi DSM 6068] gi|283438368|gb|ADB16810.1| protein of unknown function DUF140 [Pirellula staleyi DSM 6068] Length = 289 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 68/223 (30%), Positives = 121/223 (54%), Gaps = 13/223 (5%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 +L+ Y VGV +PV+ L G V+A Q F G E ++++ +RE+G + Sbjct: 61 TLLPNFYQVGVLSLPVIALTGTFIGMVLAVQSYFTFRDLGLETRMGAVINMTLVRELGPV 120 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 L A M+AGR G A+ AE+G+M++ E+IDA+ +MG D + L+ PR A + +P LTI+A Sbjct: 121 LAATMLAGRVGCAMAAELGTMRVTEQIDALESMGADPIYYLVVPRFLACLFLIPTLTIMA 180 Query: 275 NFSAIIGASIVIWKYYDIPFAV--FFSRFHSTATLAN--IFTGLIKAPFMACAIGIVAMK 330 +F ++G + Y + ++ ++S + N +F+G++K+ F AI +V+ Sbjct: 181 DFMGVVGG----YFYSTVVLSIDKHHYWYNSEQFVGNFDLFSGILKSLFFGAAIAVVSCY 236 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIID-----SLFAIFY 368 GF + +G+ T V S ++++ID L+ ++Y Sbjct: 237 RGFHCTPGAEGVGRAATAAFVHSFVLILVIDLFLGKMLYTLYY 279 >gi|83309431|ref|YP_419695.1| ABC-type transport system [Magnetospirillum magneticum AMB-1] gi|82944272|dbj|BAE49136.1| ABC-type transport system [Magnetospirillum magneticum AMB-1] Length = 271 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 117/212 (55%) Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 L ++ Q +G+ +P+V ++S G ++A QG + L FGAE +++ +RE G Sbjct: 54 LAPVVAQAMEIGIGALPIVTVLSATIGIMLAIQGIYTLRLFGAESRVSLGVAMSVVREFG 113 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 L+T +++AGRSGSA+ A +G+M+IN+EIDA+ MG+ VR L+ P + A++ LP LT+ Sbjct: 114 PLITGILVAGRSGSALAARLGTMRINQEIDALTVMGVSPVRFLVVPPLLAMMAMLPALTL 173 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 ++ + A + I + L +I+ GL K+ + I +V + G Sbjct: 174 WSDLVGLFAAGLYIAPQLGSSMGAYVDEMTDLVRLNDIWHGLGKSAIFSVLITVVGVVNG 233 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +V + +G+ T VV +IS ++I D +F Sbjct: 234 ASVTGGAEGVGRMTTRSVVHAISAIVITDMIF 265 >gi|91206155|ref|YP_538510.1| ABC transporter permease protein [Rickettsia bellii RML369-C] gi|157826543|ref|YP_001495607.1| ABC transporter permease protein [Rickettsia bellii OSU 85-389] gi|122425169|sp|Q1RGU3|Y1340_RICBR RecName: Full=Probable ABC transporter permease protein RBE_1340 gi|91069699|gb|ABE05421.1| ABC transporter permease protein [Rickettsia bellii RML369-C] gi|157801847|gb|ABV78570.1| ABC transporter permease protein [Rickettsia bellii OSU 85-389] Length = 259 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 66/217 (30%), Positives = 125/217 (57%), Gaps = 2/217 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 +I+Q+ ++G +PVV + +F +GAV+A Q S+F AE SI + +L L RE+G + Sbjct: 44 IIKQLLFIGFYSLPVVAMTTFFSGAVLALQSYTGFSRFSAE-SSIATVVVLSLTRELGPV 102 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 L +M+AGR G++I AEIG+M++ E++DA+ T+ D ++ L+ P++ A II++P L ++ Sbjct: 103 LAGLMVAGRVGASIAAEIGTMRVTEQVDALYTLSTDSIKYLVFPKVIAAIITMPCLVLIG 162 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 + ++G +V D + + + ++ +GL+KA I I++ G+ Sbjct: 163 DVIGVMGGYLVGVYKLDFNSSTYLTSTFQYLEPIDVISGLVKAGVFGFIISIISCYSGYY 222 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 G + +G+ T+ VV S +++I + L +F + Sbjct: 223 SGKGAKGVGRATTSAVVNSSILILISNYLITELFFKV 259 >gi|66047367|ref|YP_237208.1| hypothetical protein Psyr_4140 [Pseudomonas syringae pv. syringae B728a] gi|289676091|ref|ZP_06496981.1| putative ABC transport system permease protein [Pseudomonas syringae pv. syringae FF5] gi|63258074|gb|AAY39170.1| Protein of unknown function DUF140 [Pseudomonas syringae pv. syringae B728a] gi|330895265|gb|EGH27603.1| hypothetical protein PSYJA_00595 [Pseudomonas syringae pv. japonica str. M301072PT] gi|330937995|gb|EGH41776.1| hypothetical protein PSYPI_04838 [Pseudomonas syringae pv. pisi str. 1704B] gi|330969694|gb|EGH69760.1| hypothetical protein PSYAR_04288 [Pseudomonas syringae pv. aceris str. M302273PT] Length = 265 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 66/216 (30%), Positives = 126/216 (58%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y VGV + ++++ G V+A QG L+++G+E ++++ LRE+G ++ Sbjct: 48 LVRQLYSVGVMSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVV 107 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA ISLP+L ++ + Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFS 167 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFA 334 I GAS V + + F+S ++ + N + G+IK+ A + +A+ +G+ Sbjct: 168 VVGIWGASWVAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYD 227 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 228 CEPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 263 >gi|88861156|ref|ZP_01135790.1| putative transport protein (ABC superfamily, membrane) [Pseudoalteromonas tunicata D2] gi|88816878|gb|EAR26699.1| putative transport protein (ABC superfamily, membrane) [Pseudoalteromonas tunicata D2] Length = 259 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 70/199 (35%), Positives = 117/199 (58%), Gaps = 1/199 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q+Y VG + ++++ G V+A QG L +GAE L+++ LRE+G ++ Sbjct: 43 LIKQLYMVGFLSLMIIVVSGLFIGMVLALQGYTVLVDYGAEDSLGPLVALSLLRELGPVV 102 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D ++ +I+PR WA IIS+PLL ++ + Sbjct: 103 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAIDPLKRIIAPRFWAGIISMPLLALIFS 162 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 AI+GA +V + I F+S + + +I G+IK+ A + +A+ +G+ Sbjct: 163 AVAILGAHLVGVDWLGIDSGSFWSVMQAQVSFEKDILNGMIKSLVFAFVVTWIALYKGYF 222 Query: 335 VGVHSNSLGKKVTTCVVQS 353 S + K T VVQS Sbjct: 223 CIPTSEGISKATTETVVQS 241 >gi|23016441|ref|ZP_00056197.1| COG0767: ABC-type transport system involved in resistance to organic solvents, permease component [Magnetospirillum magnetotacticum MS-1] Length = 271 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 65/212 (30%), Positives = 118/212 (55%) Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 L ++ Q +G+ +P+V ++S G ++A QG + L FGAE +++ +RE G Sbjct: 54 LAPVVAQAMEIGIGALPIVTVLSATIGIMLAIQGIYTLRLFGAESRVSLGVAMSVVREFG 113 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 L+T +++AGRSGSA+ A +G+M+IN+EIDA+ MG+ VR L+ P + A+++ LP LT+ Sbjct: 114 PLITGILVAGRSGSALAARLGTMRINQEIDALTVMGVSPVRFLVVPPLLAMMVMLPALTL 173 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 ++ + A + I + L +++ GL K+ + I +V + G Sbjct: 174 WSDLVGLFAAGLYIAPQLGSSMGAYVDEMTDLVRLNDVWHGLGKSAIFSVLITLVGVVNG 233 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +V + +G+ T VV +IS +++ D +F Sbjct: 234 ASVTGGAEGVGRLTTRSVVHAISAIVVTDMIF 265 >gi|317484538|ref|ZP_07943446.1| hypothetical protein HMPREF0179_00797 [Bilophila wadsworthia 3_1_6] gi|316924199|gb|EFV45377.1| hypothetical protein HMPREF0179_00797 [Bilophila wadsworthia 3_1_6] Length = 388 Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 65/204 (31%), Positives = 114/204 (55%) Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 GV +P+V LIS + G ++A G QL FGAEI+ L+++ R +G ++T +++AGR Sbjct: 179 GVDALPIVSLISLLVGLILAFVGVIQLKMFGAEIYVSSLVAVSMTRIMGAIMTGIILAGR 238 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 +G++ A IG+M++NEEIDA+ T+G+ LI PR+ AL PLL + ++F I+G Sbjct: 239 TGASYAAVIGTMQVNEEIDALTTLGVAPSDYLIMPRVLALTAMTPLLVLYSDFMGIMGGF 298 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 IV + +++ + N++ G++ I I +G G ++ ++G Sbjct: 299 IVGVGILGLDPMEYYTFTQKGFNINNLWVGMVHGAVYGMLIAITGCYQGLRCGRNAEAVG 358 Query: 344 KKVTTCVVQSISIVIIIDSLFAIF 367 K T+ VV SI +++ ++ I Sbjct: 359 KATTSAVVYSIVGIVLSTAVLTIL 382 >gi|294788757|ref|ZP_06753998.1| putative membrane protein [Simonsiella muelleri ATCC 29453] gi|294483239|gb|EFG30925.1| putative membrane protein [Simonsiella muelleri ATCC 29453] Length = 258 Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 68/217 (31%), Positives = 123/217 (56%), Gaps = 3/217 (1%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVL 214 +IRQMY+ GV + ++ + G V+ QG QL++F A++ + + L LRE+G + Sbjct: 42 MIRQMYFSGVLSILIIAVSGLFVGMVLGLQGYTQLAKFKAADVLGFMVAAAL-LRELGPV 100 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 L A++ A SG A+ +EIG MK E+++A+ M ++ V +++PR WA ++S+PLL + Sbjct: 101 LAAILFASSSGGAMTSEIGLMKTTEQLEAMNVMAINPVARVVAPRFWAGVVSMPLLASIF 160 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGF 333 N + I G +V ++ + VF+S ++ T + ++ GLIK+ A+ ++A+ +GF Sbjct: 161 NVAGIWGGYLVGVQWLGLDSGVFWSHMQNSMTFSYDVLNGLIKSMIFGTAVSLIAVYQGF 220 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + + T VV S V+ +D + F FA Sbjct: 221 HCRPTAEGILRASTRTVVSSALTVLALDFILTAFMFA 257 >gi|239947145|ref|ZP_04698898.1| membrane protein [Rickettsia endosymbiont of Ixodes scapularis] gi|239921421|gb|EER21445.1| membrane protein [Rickettsia endosymbiont of Ixodes scapularis] Length = 261 Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 78/266 (29%), Positives = 142/266 (53%), Gaps = 9/266 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N+ +GK+ +KF S + + +S S + +L +IRQ+ ++G + Sbjct: 4 NIANSVGKRTIKFAQSVGSFSLFIFAAVS-------SIIRPPLYLSLIIRQLLFIGFHSL 56 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTAVMIAGRSGSA 227 VV + +F +GAV+A Q S+F AE SI + IL L RE+G +L +M+AGR G++ Sbjct: 57 SVVAMTTFFSGAVLALQSYTGFSRFSAE-SSIATVVILSLTRELGPVLAGLMVAGRVGAS 115 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I AEI +M++ E++DA+ T+ D ++ L+ PR+ A II++P L ++ + ++G +V Sbjct: 116 IAAEIATMRVTEQVDALYTLSTDPIKYLVFPRVIAAIITMPCLVLIGDIIGVMGGYLVGV 175 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 D A + + ++ +GL+KA I I++ G+ G + +G+ T Sbjct: 176 YKLDFNSAAYLTSTFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRATT 235 Query: 348 TCVVQSISIVIIIDSLFAIFYFAIGI 373 + VV S +++I + L +F + I Sbjct: 236 SAVVNSSILILISNYLITELFFKVQI 261 >gi|313891881|ref|ZP_07825486.1| conserved hypothetical protein [Dialister microaerophilus UPII 345-E] gi|313119875|gb|EFR43062.1| conserved hypothetical protein [Dialister microaerophilus UPII 345-E] Length = 253 Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 66/212 (31%), Positives = 116/212 (54%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q +GV+ P+V L TG V + Q +L ++GAE + +++I RE+G +L Sbjct: 42 KQCLLLGVNSFPIVFLTLLFTGMVFSAQIVGELVKYGAEFTAGSIVAIGLGRELGPVLCG 101 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 V++AGR G+AI AE+G+M++ E+IDA+R M +D V L+ PR+ A +I LP+L + A + Sbjct: 102 VVLAGRVGAAITAELGTMRVTEQIDALRCMAVDPVEYLVLPRVIACMIMLPILDVFAVTT 161 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 + G IV +I +++ S ++++ G+IK F I + G Sbjct: 162 GVGGGMIVASVTGNISSHMYWDSITSFCVASDLYIGMIKTVFFGMIIALTGCDRGLTCET 221 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +GK T VV S+ ++ I++ + + F Sbjct: 222 GAEGVGKATTQSVVYSMIMIFIVNYILSTILF 253 >gi|238899004|ref|YP_002924686.1| putative ABC transporter, permease protein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466764|gb|ACQ68538.1| putative ABC transporter, permease protein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 261 Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 74/218 (33%), Positives = 120/218 (55%), Gaps = 6/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 LI+Q+Y VGV + ++++ G V+ QG L+ +GAE S+ ++ L L RE+G + Sbjct: 45 LIKQLYRVGVQSILIIVISGLFIGMVLGLQGYLTLTTYGAE-GSLGMLVALSLFRELGPV 103 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 ++A++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +ISLPLL L Sbjct: 104 VSALLFAGRAGSALTAEIGLMKATEQLSSLEMMAIDPLRRVIAPRFWAGVISLPLLAALF 163 Query: 275 NFSAIIGASIVI--WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 I G+S+V WK D F F+S H + +++ K+ A I +++ G Sbjct: 164 ISVGIFGSSMVAIDWKGIDAGF--FWSAMHDSVMPSDVINCFFKSVSFAVIITWISVFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + T VV S V+ +D L + F Sbjct: 222 YDATPTSEGISLATTRTVVNSSLAVLAVDFLLTVLMFG 259 >gi|297537487|ref|YP_003673256.1| hypothetical protein M301_0292 [Methylotenera sp. 301] gi|297256834|gb|ADI28679.1| protein of unknown function DUF140 [Methylotenera sp. 301] Length = 268 Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 80/259 (30%), Positives = 141/259 (54%), Gaps = 8/259 (3%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 IG ++V+ I + A + L I +GE FK F L++ R++Y GV + ++I+ Sbjct: 17 IGHRMVERIWRLGAGARLFFLTIVYSGE------SFKRFHLTM-REIYSTGVMSLLIIIV 69 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 +F G V+A QG L ++G+ L+S+ +RE+G ++TA++ AGR+G+AI AEIG Sbjct: 70 SAFFVGMVLALQGYNTLQKYGSSEAIGVLVSLSLVRELGPVVTALLFAGRAGTAITAEIG 129 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 MK E++ A+ M ++ + +++PR WA +IS+P+L L + I+G IV + Sbjct: 130 LMKTTEQLSAMEMMAVNPIARVVAPRFWAGVISMPILATLFSMVGILGGYIVAVPLIGVD 189 Query: 294 FAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 F+S+ ++ ++I G+IK+ A ++A+ EGF + + + T VV Sbjct: 190 EGAFWSQMQASVDFQSDIVNGIIKSLVFGVACTMIALFEGFDAPPTAEGVSRATTRTVVI 249 Query: 353 SISIVIIIDSLFAIFYFAI 371 S V+ +D + F I Sbjct: 250 SSLTVLGLDFVLTSFMLVI 268 >gi|298488498|ref|ZP_07006528.1| permease component of an ABC superfamily transporter [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156839|gb|EFH97929.1| permease component of an ABC superfamily transporter [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 265 Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 126/216 (58%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y VGV + ++++ G V+A QG L+++G+E ++++ LRE+G ++ Sbjct: 48 LVRQLYSVGVMSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVV 107 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA IS+P+L ++ + Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFS 167 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFA 334 I GAS V + + F+S ++ + N + G+IK+ A + +A+ +G+ Sbjct: 168 VVGIWGASWVAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYD 227 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 228 CDPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 263 >gi|86159557|ref|YP_466342.1| hypothetical protein Adeh_3136 [Anaeromyxobacter dehalogenans 2CP-C] gi|85776068|gb|ABC82905.1| protein of unknown function DUF140 [Anaeromyxobacter dehalogenans 2CP-C] Length = 386 Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 67/211 (31%), Positives = 110/211 (52%) Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221 + G +P+V L+SF+ G ++A G QL FGAE F D++ I +R++ L+T V +A Sbjct: 175 HSGAEALPIVALVSFLVGIILAFVGITQLRFFGAEAFVADIVGIAIVRDMAALITGVTLA 234 Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281 GRSG A A++ +M + +EIDA+RT+G+ V L+ PR+ AL +PLLT+ A+ S I+G Sbjct: 235 GRSGGAFAAQLATMNVTQEIDALRTLGISPVEYLVVPRVLALTAMMPLLTLFADASGILG 294 Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341 ++V P A + + ++ GL+K I + G + Sbjct: 295 GAMVGTTMLHQPLAGYLHQTALALVPGDLAGGLVKGATYGLLIALTGAFRGMQAERSAER 354 Query: 342 LGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 +G+ T VV I +I ++ +F G Sbjct: 355 VGEAATQAVVTGIVAIISACGVYQYVFFLFG 385 >gi|157964160|ref|YP_001498984.1| ABC transporter permease protein [Rickettsia massiliae MTU5] gi|157843936|gb|ABV84437.1| ABC transporter permease protein [Rickettsia massiliae MTU5] Length = 264 Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 77/266 (28%), Positives = 139/266 (52%), Gaps = 13/266 (4%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKG--FLLSLIRQMYYVGVS 166 N+ +GK+ +KF S + F A S + +L +IRQ+ +G Sbjct: 9 NIANSVGKRTIKFAQSVGSFSLF---------SFAAVSSIIRPPLYLSLIIRQLLLIGFH 59 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTAVMIAGRSG 225 +PVV + +F +GAV+A Q S+F AE SI + +L L RE+G +L +M+AGR G Sbjct: 60 SLPVVAMTTFFSGAVLALQSYTGFSRFSAE-SSIATVVVLSLTRELGPVLAGLMVAGRVG 118 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 ++I AEI +M++ E++DA+ T+ D ++ L+ PR+ II++P L ++ + ++G +V Sbjct: 119 ASIAAEIATMRVTEQVDALYTLSTDPIKYLVFPRVITAIITMPCLVLIGDIIGVMGGYLV 178 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 D A + + ++ +GL+KA I I++ G+ G + +G+ Sbjct: 179 GVYKLDFNSAAYLTSTFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRA 238 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAI 371 T+ VV S +++I + L +F + Sbjct: 239 TTSAVVNSSILILISNYLITELFFKV 264 >gi|71736723|ref|YP_276266.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. phaseolicola 1448A] gi|257483485|ref|ZP_05637526.1| toluene tolerance proteinTtg2B, putative [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289627577|ref|ZP_06460531.1| putative ABC transport system permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647003|ref|ZP_06478346.1| putative ABC transport system permease protein [Pseudomonas syringae pv. aesculi str. 2250] gi|71557276|gb|AAZ36487.1| toluene tolerance proteinTtg2B, putative [Pseudomonas syringae pv. phaseolicola 1448A] gi|330869989|gb|EGH04698.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330987098|gb|EGH85201.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. lachrymans str. M301315] Length = 265 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 126/216 (58%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y VGV + ++++ G V+A QG L+++G+E ++++ LRE+G ++ Sbjct: 48 LVRQLYSVGVMSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVV 107 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA IS+P+L ++ + Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFS 167 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFA 334 I GAS V + + F+S ++ + N + G+IK+ A + +A+ +G+ Sbjct: 168 VVGIWGASWVAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYD 227 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 228 CEPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 263 >gi|113476613|ref|YP_722674.1| hypothetical protein Tery_3053 [Trichodesmium erythraeum IMS101] gi|110167661|gb|ABG52201.1| protein of unknown function DUF140 [Trichodesmium erythraeum IMS101] Length = 249 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 70/198 (35%), Positives = 108/198 (54%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I QM VG + +V+L + G V Q A +L FG ++++ RE+G +LT Sbjct: 26 IEQMAIVGPESLLIVLLTASFVGMVFTIQVARELVAFGTANMVGGMLALTLSRELGPVLT 85 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV++AGR GSA AEIG+MK+ E+IDA+ + D V L+ PR+ A + +P+LT+L Sbjct: 86 AVVVAGRVGSAFAAEIGTMKVTEQIDALYILKTDPVDYLVIPRVIACGVMMPILTLLCLV 145 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 +AI G I+ YDIP +++ S TL ++ +GL K+ I ++ G Sbjct: 146 AAIFGGLIIAVNLYDIPQSMYIDSVRSFLTLWDLCSGLTKSVVFGVLIAVIGTSWGLTTT 205 Query: 337 VHSNSLGKKVTTCVVQSI 354 + +GK TT VV S+ Sbjct: 206 GGAKGVGKSTTTAVVTSL 223 >gi|297621446|ref|YP_003709583.1| putative permease component of ABC transporter [Waddlia chondrophila WSU 86-1044] gi|297376747|gb|ADI38577.1| putative permease component of ABC transporter [Waddlia chondrophila WSU 86-1044] Length = 274 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 70/212 (33%), Positives = 118/212 (55%), Gaps = 1/212 (0%) Query: 156 LIR-QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 LIR QMY +GV +PVV + F TG V+A Q FQL+ G + +++ + E+G + Sbjct: 46 LIRNQMYEIGVLSLPVVAITGFSTGMVLAAQSFFQLADKGLASATGLMVAKAMMVELGPV 105 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 LTA M+ GR G+++ AE+G+MK+ E+IDA+++M ++ + LI+PR A + LPLLT+ + Sbjct: 106 LTAFMVTGRVGASMCAELGTMKVTEQIDALKSMTVNPLGYLIAPRFIAGTLMLPLLTVFS 165 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 I G ++ +Y +P F T + F+GL+KA I ++ +G Sbjct: 166 TVMGIGGGYMIAVWFYKMPSNTFLDPLPINITNFDFFSGLVKAISFGIVIVTISCYKGMT 225 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + +G+ T VV S+++I + L + Sbjct: 226 TRGGAAGVGRATTNSVVICYSVILIGNFLLTV 257 >gi|320330045|gb|EFW86032.1| putative ABC transport system permease protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 265 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 126/216 (58%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y VGV + ++++ G V+A QG L+++G+E ++++ LRE+G ++ Sbjct: 48 LVRQLYSVGVMSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVV 107 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA IS+P+L ++ + Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFS 167 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFA 334 I GAS V + + F+S ++ + N + G+IK+ A + +A+ +G+ Sbjct: 168 VVGIWGASWVAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYD 227 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 228 CEPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 263 >gi|332038535|gb|EGI74978.1| uncharacterized ABC transporter, permease component YrbE [Pseudoalteromonas haloplanktis ANT/505] Length = 259 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 69/199 (34%), Positives = 115/199 (57%), Gaps = 1/199 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y VG + ++++ G V+A QG L +GAE L+++ LRE+G ++ Sbjct: 43 LVRQLYMVGSQSLLIIMVSGLFIGMVLALQGYTVLVGYGAEDSLGPLVALSLLRELGPVV 102 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D ++ +I+PR WA IS+PLL ++ + Sbjct: 103 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAIDPLKRIIAPRFWAGFISMPLLALIFS 162 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334 AIIGA +V + + F+S S + +I G+IK+ A + +A+ +G+ Sbjct: 163 AVAIIGAHLVGVDWLGVDTGSFWSIMQSQVSFQQDILNGIIKSFVFAIVVTWIALYKGYD 222 Query: 335 VGVHSNSLGKKVTTCVVQS 353 S + K T VV S Sbjct: 223 CVPTSEGISKATTETVVHS 241 >gi|331011542|gb|EGH91598.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 265 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 126/216 (58%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y VGV + ++++ G V+A QG L+++G+E ++++ LRE+G ++ Sbjct: 48 LVRQLYSVGVMSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVV 107 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA IS+P+L ++ + Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFS 167 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFA 334 I GAS V + + F+S ++ + N + G+IK+ A + +A+ +G+ Sbjct: 168 VVGIWGASWVAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYD 227 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 228 CEPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 263 >gi|330888613|gb|EGH21274.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. mori str. 301020] Length = 230 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 64/216 (29%), Positives = 126/216 (58%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y VGV + ++++ G V+A QG L+++G+E ++++ LRE+G ++ Sbjct: 13 LVRQLYSVGVMSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVV 72 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA IS+P+L ++ + Sbjct: 73 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFS 132 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFA 334 + GAS V + + F+S ++ + N + G+IK+ A + +A+ +G+ Sbjct: 133 VVGVWGASWVAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYD 192 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 193 CDPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 228 >gi|213966604|ref|ZP_03394755.1| membrane protein [Pseudomonas syringae pv. tomato T1] gi|301383114|ref|ZP_07231532.1| putative ABC transport system permease protein [Pseudomonas syringae pv. tomato Max13] gi|302058647|ref|ZP_07250188.1| putative ABC transport system permease protein [Pseudomonas syringae pv. tomato K40] gi|302133824|ref|ZP_07259814.1| putative ABC transport system permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928454|gb|EEB61998.1| membrane protein [Pseudomonas syringae pv. tomato T1] gi|330877179|gb|EGH11328.1| hypothetical protein PSYMP_16986 [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330964018|gb|EGH64278.1| hypothetical protein PSYAC_05120 [Pseudomonas syringae pv. actinidiae str. M302091] gi|331016694|gb|EGH96750.1| hypothetical protein PLA106_11700 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 265 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 126/216 (58%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y VGV + ++++ G V+A QG L+++G+E ++++ LRE+G ++ Sbjct: 48 LVKQLYSVGVMSLVIIVVSGMFIGMVLALQGFSILAKYGSEQAVGQMVALTLLRELGPVV 107 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA ISLP+L ++ + Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFS 167 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFA 334 I GAS V + + F+S ++ + N + G+IK+ A + +A+ +G+ Sbjct: 168 VVGIWGASWVAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYD 227 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 228 CDPTSEGISRATTKTVVYASLAVLGLDFILTALMFG 263 >gi|224369296|ref|YP_002603460.1| ABC-type transporter involved in resistance to organic solvents, permease protein [Desulfobacterium autotrophicum HRM2] gi|223692013|gb|ACN15296.1| ABC-type transporter involved in resistance to organic solvents, permease protein [Desulfobacterium autotrophicum HRM2] Length = 269 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 116/212 (54%), Gaps = 6/212 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +I ++++G+ + V+IL TG V+ QG + L +FG+E +++ +RE+G +L Sbjct: 50 IIEHIWFIGMKSMMVIILTGIFTGMVLGLQGYYTLVRFGSEGMLGSAVALTLIRELGPVL 109 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA+M+ R+GSA+ AE+G M+I+++IDA+ TM ++ VR L +PRI A +IS PLLT L + Sbjct: 110 TAIMVTARAGSAMAAELGVMRISQQIDALDTMDINPVRYLFTPRIIAAVISFPLLTALFD 169 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I G + I ++ R + + ++ G +K+ + + V G+ Sbjct: 170 VIGIFGGYLTGSLMLGINSGIYLFRVEESVLMTDVTGGFVKSLVFSLVVTTVCCSRGYFT 229 Query: 336 GVH-SNSLGKK-----VTTCVVQSISIVIIID 361 +H G K TT VV S +V++ D Sbjct: 230 HLHRGGGFGAKGVSFSTTTAVVNSCVLVLVCD 261 >gi|297171834|gb|ADI22824.1| ABC-type transport system involved in resistance to organic solvents, permease component [uncultured Oceanospirillales bacterium HF0500_29K23] Length = 260 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 74/218 (33%), Positives = 126/218 (57%), Gaps = 5/218 (2%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 +F+G L+ Q++++GV VV+L TG V+ Q Q + + + ++++ Sbjct: 34 RFRG--RDLVEQLHFIGVKSQSVVLLTGAFTGMVMCAQFYIQFHKVKMDSAVMSVVTVAM 91 Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267 RE+G +LT++MIAGR G+A+ A++G+MK+ E+IDA+RT+ V L++PR+ A++ISL Sbjct: 92 ARELGAVLTSLMIAGRVGAAMAAQLGTMKVTEQIDALRTLATSPVDYLVAPRLLAMLISL 151 Query: 268 PLLTILA-NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326 PLLT A S + G + ++ P ++ + T ++ +I+ GLIKA A I Sbjct: 152 PLLTAEAIAISMVSGMLVAVYLLGLDPVFLWSNMVFYTGSV-DIWMGLIKAFIFAGIIAT 210 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 VA +G G + +GK T VV + SI I++ + F Sbjct: 211 VACHKGMHCGQGAEGVGKATTEAVVAA-SISILVSNFF 247 >gi|197335795|ref|YP_002155152.1| toluene tolerance protein Ttg2B, putative [Vibrio fischeri MJ11] gi|197317285|gb|ACH66732.1| toluene tolerance protein Ttg2B, putative [Vibrio fischeri MJ11] Length = 264 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 79/232 (34%), Positives = 124/232 (53%), Gaps = 2/232 (0%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G A K F L L++Q+Y VGV + ++++ G VI+ QG L +GAE Sbjct: 33 GAIFAKPQPIKMFPL-LLKQLYSVGVLSLVIIVVSGLFIGMVISLQGYIILVDYGAETSL 91 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 L+S+ LRE+G ++TA++ AGR+GSA+ AEIG MK E+I ++ M +D +R +I+PR Sbjct: 92 GQLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKTTEQISSMEMMAVDPLRQIIAPR 151 Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAP 318 +WA IIS+P+L ++ I G IV ++ I + F+S S+ + +I LIK Sbjct: 152 LWAGIISMPILAVIFMAVGIWGGQIVGVEWKGIDYGSFWSVMQSSVDVRYDIVNSLIKCV 211 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 A + +A+ G+ S + T VV S V+ ID + F Sbjct: 212 VFAFIVTWIALFNGYDATPTSEGISLATTRTVVHSSLAVLGIDFVLTALMFG 263 >gi|59711002|ref|YP_203778.1| toluene ABC transporter membrane protein [Vibrio fischeri ES114] gi|59479103|gb|AAW84890.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Vibrio fischeri ES114] Length = 264 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 79/232 (34%), Positives = 124/232 (53%), Gaps = 2/232 (0%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G A K F L L++Q+Y VGV + ++++ G VI+ QG L +GAE Sbjct: 33 GAIFAKPQPIKMFPL-LLKQLYSVGVLSLVIIVVSGLFIGMVISLQGYIILVDYGAETSL 91 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 L+S+ LRE+G ++TA++ AGR+GSA+ AEIG MK E+I ++ M +D +R +I+PR Sbjct: 92 GQLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKTTEQISSMEMMAVDPLRQIIAPR 151 Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAP 318 +WA IIS+P+L ++ I G IV ++ I + F+S S+ + +I LIK Sbjct: 152 LWAGIISMPVLAVIFMAVGIWGGQIVGVEWKGIDYGSFWSVMQSSVDVRYDIINSLIKCV 211 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 A + +A+ G+ S + T VV S V+ ID + F Sbjct: 212 VFAFIVTWIALFNGYDATPTSEGISLATTRTVVHSSLAVLGIDFVLTALMFG 263 >gi|170717850|ref|YP_001784909.1| hypothetical protein HSM_1589 [Haemophilus somnus 2336] gi|168825979|gb|ACA31350.1| protein of unknown function DUF140 [Haemophilus somnus 2336] Length = 261 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 70/218 (32%), Positives = 120/218 (55%), Gaps = 1/218 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q+Y +GV + +++L G V+ QG L F AE L+++ LRE+G ++ Sbjct: 43 LIKQLYVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVV 102 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +ISPR WA +IS+P+L ++ Sbjct: 103 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVISPRFWAGVISMPILAVIFT 162 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G S+V + + F+S ++ + ++ G IK+ A A+ +A+ G+ Sbjct: 163 AIGIWGGSLVGVDWKGVDAGSFWSVMQNSVSWGYDLLNGCIKSLCFAIAVVWIALFNGYD 222 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 S + K T VV + +V+ +D + F G Sbjct: 223 CIPTSEGISKATTKTVVHASLVVLGLDFVLTALMFGAG 260 >gi|242277698|ref|YP_002989827.1| hypothetical protein Desal_0221 [Desulfovibrio salexigens DSM 2638] gi|242120592|gb|ACS78288.1| protein of unknown function DUF140 [Desulfovibrio salexigens DSM 2638] Length = 270 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 66/210 (31%), Positives = 117/210 (55%), Gaps = 5/210 (2%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 ++++Y++GV + V+ LI TG V+ Q + LS+FG+E F +++ +RE+G +LT Sbjct: 53 VKELYFIGVKSITVISLIGLFTGMVVGLQTQYALSKFGSEGFLGAAVALSLVRELGPVLT 112 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A+M+ GR+GS++ AEIG M+I+E+IDA+ M ++ + L+SP++ A +IS P+LT + Sbjct: 113 AIMLTGRAGSSMTAEIGVMRISEQIDALELMDINPINYLVSPKLVASLISFPILTAFFDL 172 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV- 335 I+G + V++ R H+ +I G K+ A + V +G+ Sbjct: 173 IGIVGGYLSGVMLMGGNAGVYWHRVHTALGWDDISAGFNKSLVFAVLVCTVCCFQGYFTH 232 Query: 336 ----GVHSNSLGKKVTTCVVQSISIVIIID 361 G + + TT VV S +V++ D Sbjct: 233 HRKDGKGPEGVSQATTTAVVMSCVLVLVAD 262 >gi|237798606|ref|ZP_04587067.1| hypothetical protein POR16_07195 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021459|gb|EGI01516.1| hypothetical protein POR16_07195 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 265 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 66/216 (30%), Positives = 126/216 (58%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q+Y VGV + ++++ G V+A QG L+++G+E ++++ LRE+G ++ Sbjct: 48 LIKQLYSVGVMSLVIIVVSGVFIGMVLALQGFSILAKYGSEQAVGQMVALTLLRELGPVV 107 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA ISLP+L ++ + Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFS 167 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFA 334 I GAS V + + F+S ++ + N + G+IK+ A + +A+ +G+ Sbjct: 168 VVGIWGASWVAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYD 227 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 228 CDPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 263 >gi|157803278|ref|YP_001491827.1| ABC transporter permease protein [Rickettsia canadensis str. McKiel] gi|157784541|gb|ABV73042.1| ABC transporter permease protein [Rickettsia canadensis str. McKiel] Length = 259 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 70/226 (30%), Positives = 127/226 (56%), Gaps = 20/226 (8%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 +IRQ+ ++G +PVV + +F +GAV+A Q S+F AE SI + +L L RE+G + Sbjct: 44 IIRQLLFIGFYSLPVVTMTTFFSGAVLALQSYNGFSRFSAES-SIATVVVLSLTRELGPV 102 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 L +M+AGR G++I AEI +M++ E++DA+ T+ D ++ L+ PR+ ++++P L ++ Sbjct: 103 LVGLMVAGRVGASIAAEIATMRVTEQVDALYTLSTDPIKYLVFPRVITAMLTMPCLVLIG 162 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF---------TGLIKAPFMACAIG 325 + ++G +V V+ F+STA L + F +GL+KA I Sbjct: 163 DVIGVMGGYLV---------GVYKLGFNSTAYLTSTFQYLEPIDVISGLVKAGVFGFIIS 213 Query: 326 IVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 I++ G+ G + +G+ T+ VV S +++I + L +F + Sbjct: 214 IISCYSGYYSGKGAKGVGRATTSAVVNSSILILISNYLITELFFKV 259 >gi|170728557|ref|YP_001762583.1| hypothetical protein Swoo_4232 [Shewanella woodyi ATCC 51908] gi|169813904|gb|ACA88488.1| protein of unknown function DUF140 [Shewanella woodyi ATCC 51908] Length = 260 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 76/228 (33%), Positives = 123/228 (53%), Gaps = 2/228 (0%) Query: 144 ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203 A + KGF L ++Q+Y VGV + ++ + G V+A QG L FG E ++ Sbjct: 33 ARKPRAKGFPL-FVKQLYVVGVQSMVLIFVSGLFIGMVLALQGYNILVGFGTEESLGPMV 91 Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263 ++ LRE+G ++TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA Sbjct: 92 ALSLLRELGPVVTALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAG 151 Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMAC 322 ++SLPLL ++ I G IV ++ I F+S ++ +I LIK+ A Sbjct: 152 VVSLPLLALIFTAVGIYGGHIVGVEWKGIDSGSFWSILQASVEWRQDIVNCLIKSLVFAV 211 Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +A+ G+ V + + K T VVQS V+ +D L F Sbjct: 212 VVTWIALYRGYQVIPNPEGISKATTQTVVQSSLAVLALDFLLTALMFG 259 >gi|46447386|ref|YP_008751.1| hypothetical protein pc1752 [Candidatus Protochlamydia amoebophila UWE25] gi|46401027|emb|CAF24476.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila UWE25] Length = 240 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 117/207 (56%), Gaps = 1/207 (0%) Query: 156 LIR-QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 LIR Q++ +GV +PVV + F TG V+A Q FQLS G + +++ L E+G + Sbjct: 12 LIRDQLFDIGVMSLPVVAITGFSTGMVLAAQSFFQLSDKGLASATGLMVAKAMLVELGPV 71 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 LTA M+ GR G+A+ AE+G+M++ E+IDA+RTM ++ + L++PR A +I +PLLT+ + Sbjct: 72 LTAFMVTGRVGAAMCAELGTMRVTEQIDAMRTMSVNPLGYLVAPRFLAGMIMMPLLTVFS 131 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 I G ++ +Y +P + F + +G++KA I ++ +G Sbjct: 132 AIMGIFGGYLIAVYFYKMPASSFIDPLPLHINTFDFISGMVKAFVFGIIIVTISCYKGMK 191 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIID 361 + +G+ T VV S+++II+ Sbjct: 192 TRGGAAGVGRSTTNSVVICYSVILIIN 218 >gi|330958007|gb|EGH58267.1| hypothetical protein PMA4326_05446 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 265 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 126/216 (58%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y VGV + ++++ G V+A QG L+++G+E ++++ LRE+G ++ Sbjct: 48 LVKQLYSVGVMSLVIIVVSGIFIGMVLALQGFSILAKYGSEQAVGQMVALTLLRELGPVV 107 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA ISLP+L ++ + Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFS 167 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFA 334 I GAS V + + F+S ++ + N + G+IK+ A + +A+ +G+ Sbjct: 168 VVGIWGASWVAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYD 227 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 228 CDPTSEGISRATTKTVVYASLAVLGLDFILTALMFG 263 >gi|33151499|ref|NP_872852.1| permease [Haemophilus ducreyi 35000HP] gi|33147719|gb|AAP95241.1| probable permease [Haemophilus ducreyi 35000HP] Length = 259 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 70/215 (32%), Positives = 117/215 (54%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q+Y +GV + ++IL G V+A QG L F AE L+S+ LRE+G ++ Sbjct: 44 LIKQLYILGVQSLLIIILSGLFIGMVLALQGYVVLVDFAAESSLGTLISLSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEI MK E++ ++ M +D +R +I+PR WA +IS+P+L ++ Sbjct: 104 TALLFAGRAGSALTAEIALMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPILAVIFT 163 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I G S+V + + F+S + ++ G IK+ A A+ +A+ G+ Sbjct: 164 AIGIWGGSLVGVDWKGVDSGSFWSVMQHSVNGQDLINGFIKSIIFAIAVVWIALFNGYDS 223 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + IV+ +D + F Sbjct: 224 TATSEGISQATTRTVVHASLIVLGLDFILTAMMFG 258 >gi|113461315|ref|YP_719384.1| ABC transporter permease [Haemophilus somnus 129PT] gi|112823358|gb|ABI25447.1| permease component, possible ABC transporter [Haemophilus somnus 129PT] Length = 261 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 69/218 (31%), Positives = 121/218 (55%), Gaps = 1/218 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q+Y +GV + +++L G V+ QG L F AE L+++ LRE+G ++ Sbjct: 43 LIKQLYVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVV 102 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +ISPR WA +IS+P+L ++ Sbjct: 103 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVISPRFWAGVISMPILAVIFT 162 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G S++ + + F+S ++ + + ++ G IK+ A A+ +A+ G+ Sbjct: 163 AIGIWGGSLIGVDWKGVDAGSFWSVMQNSVSWSYDLLNGFIKSLCFAIAVVWIALFNGYD 222 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 S + K T VV + +V+ +D + F G Sbjct: 223 CIPTSEGISKATTKTVVHASLVVLGLDFVLTALMFGAG 260 >gi|261868147|ref|YP_003256069.1| ABC transporter permease [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413479|gb|ACX82850.1| conserved ABC-type transport system protein, permease component [Aggregatibacter actinomycetemcomitans D11S-1] Length = 261 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 69/207 (33%), Positives = 120/207 (57%), Gaps = 1/207 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q++ +GV + +++L G V+ QG L F AE L+++ LRE+G ++ Sbjct: 44 LIKQLHVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +I++P+L+I+ Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPILSIIFI 163 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G S+V + + F+S S+ T + +I G IK+ F A A+ +A+ G+ Sbjct: 164 AIGIWGGSLVGVDWKGVDSGSFWSVMQSSVTWSHDILNGFIKSLFFAIAVVWIALFNGYD 223 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIID 361 S + K T VV + +++ +D Sbjct: 224 CIPTSEGISKATTRTVVHASLVILGLD 250 >gi|325273317|ref|ZP_08139589.1| hypothetical protein G1E_09861 [Pseudomonas sp. TJI-51] gi|324101550|gb|EGB99124.1| hypothetical protein G1E_09861 [Pseudomonas sp. TJI-51] Length = 265 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 124/216 (57%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LIRQ+Y VGV + +V++ G V+A QG L+++G+E ++++ LRE+G ++ Sbjct: 48 LIRQLYSVGVLSLAIVVVSGVFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVV 107 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA ISLPLL ++ + Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFS 167 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G S V + + F++ ++ + ++ GLIK+ A +A+ +G+ Sbjct: 168 VVGIWGGSWVAVDWLGVYEGSFWANMQNSVSFTDDVLNGLIKSLVFAFVATWIAVFQGYD 227 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 228 CEPTSEGISRATTKTVVYASLAVLGLDFILTALMFG 263 >gi|255020159|ref|ZP_05292228.1| hypothetical protein ACA_0896 [Acidithiobacillus caldus ATCC 51756] gi|254970301|gb|EET27794.1| hypothetical protein ACA_0896 [Acidithiobacillus caldus ATCC 51756] Length = 260 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 119/215 (55%), Gaps = 1/215 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 +RQ+Y GV + ++++ +F TG V+ QG + L +FGA L+++ LRE+G +LT Sbjct: 46 LRQVYGFGVLSLALMVVAAFFTGMVLGFQGYYALVRFGATSALGTLVALSLLRELGPVLT 105 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+GSA+ AEI +MK E++ A+ M +D + ++SPR+WA + ++P+L ++ + Sbjct: 106 ALLFAGRAGSALTAEIATMKATEQLSAMEMMAVDPLAWVVSPRLWAAVFTVPILCVIFDL 165 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I G ++ + F+S+ S + +I GL KA + +A +G++ Sbjct: 166 VGIFGGYLIAVPVLGVDSGTFWSQMQSNVSFRGDILNGLFKALCFGLVVAWIAAWQGYSA 225 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +G T VV + V+ +D + F+ Sbjct: 226 KPTAEGVGNATTRSVVAASLAVLGLDFILTALLFS 260 >gi|256828811|ref|YP_003157539.1| protein of unknown function DUF140 [Desulfomicrobium baculatum DSM 4028] gi|256577987|gb|ACU89123.1| protein of unknown function DUF140 [Desulfomicrobium baculatum DSM 4028] Length = 263 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 73/213 (34%), Positives = 126/213 (59%), Gaps = 10/213 (4%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 ++ +Y++G + ++IL++F TG V+ QG + L +F AE +++ +RE+G +L Sbjct: 46 ILYDIYFIGFKSLNIIILVAFFTGMVLGLQGYYTLIKFSAEGMLGVAVALSLVRELGPVL 105 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA+M+ GR+GS+I AEIG M+I+E+IDA+ TM +D VR L++P+I A +I PLLT + + Sbjct: 106 TAIMLIGRAGSSISAEIGIMRISEQIDALSTMDVDPVRYLVTPKIIASLICFPLLTAIFD 165 Query: 276 FSAIIGA--SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 I+G S V+ +FFS+ S+ L+++ G IK+ A + ++ G+ Sbjct: 166 CVGILGGYFSSVLLSSRS---GIFFSKIQSSLLLSDVTGGFIKSFVFAFIVITISCYCGY 222 Query: 334 AVGVHSNSLGKK-----VTTCVVQSISIVIIID 361 + +S G + T+ VVQS V++ D Sbjct: 223 YTHQNQSSAGAEGVSNSTTSAVVQSCVYVLVSD 255 >gi|218885955|ref|YP_002435276.1| hypothetical protein DvMF_0852 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756909|gb|ACL07808.1| protein of unknown function DUF140 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 267 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 68/217 (31%), Positives = 121/217 (55%), Gaps = 5/217 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 ++ Q++ +G + V++LI TG V+ QG + L +FG+E +++ +RE+G +L Sbjct: 49 ILNQVFVIGSKSLFVILLIGVFTGMVLGLQGYYTLVKFGSEGLLGAAVALSLIRELGPVL 108 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA+M+ GR+GS++ AEIG M+I ++IDA+ M ++ + L++PRI A +IS PLLT + + Sbjct: 109 TAIMVTGRAGSSMAAEIGVMRITDQIDALDVMDINPMAYLVAPRIAASLISFPLLTAIFD 168 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I+G + I V+F R ++ +A+I G +K+ A + V+ +G+ Sbjct: 169 VVGILGGYVTGVTLLGINEGVYFYRIQTSVEMADITGGFMKSVLFAVIVATVSCYQGYFT 228 Query: 336 -----GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 GV + T+ VV S V++ D + F Sbjct: 229 HMRRDGVGPEGVSNSTTSAVVLSCVFVLVADYVLTSF 265 >gi|28871581|ref|NP_794200.1| hypothetical protein PSPTO_4446 [Pseudomonas syringae pv. tomato str. DC3000] gi|28854833|gb|AAO57895.1| membrane protein, putative [Pseudomonas syringae pv. tomato str. DC3000] Length = 265 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 126/216 (58%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y VGV + ++++ G V+A QG L+++G+E ++++ LRE+G ++ Sbjct: 48 LVKQLYSVGVMSLVIIVVSGMFIGMVLALQGFSILAKYGSEQAVGQMVALTLLRELGPVV 107 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA ISLP+L ++ + Sbjct: 108 TALLFAGRAGSALSAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFS 167 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFA 334 I GAS V + + F+S ++ + N + G+IK+ A + +A+ +G+ Sbjct: 168 VVGIWGASWVAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYD 227 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 228 CDPTSEGISRATTKTVVYASLAVLGLDFILTALMFG 263 >gi|94986675|ref|YP_594608.1| ABC-type transport system involved in resistance to organic solvents, permease component [Lawsonia intracellularis PHE/MN1-00] gi|94730924|emb|CAJ54287.1| ABC-type transport system involved in resistance to organic solvents, permease component [Lawsonia intracellularis PHE/MN1-00] Length = 266 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 74/210 (35%), Positives = 117/210 (55%), Gaps = 5/210 (2%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 IRQ+Y +G + V+ LI TG V+ QG + L +FG+ F +S+ +RE+G +LT Sbjct: 48 IRQIYVIGTKSLFVISLIGLFTGMVLGLQGYYVLIKFGSVGFLGSAVSLTLIRELGPVLT 107 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A+MI R+GS++ AEIG M+I ++IDA+ M + + L+SPRI A +IS PLLT + + Sbjct: 108 AIMIIARAGSSMTAEIGVMRITDQIDALEVMDIPGIGYLVSPRIVASLISFPLLTAVFDV 167 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV- 335 IIG + + +FS S+ TL++I G IKA A + ++ +G+ Sbjct: 168 IGIIGGYLTGVCLLGVNEGAYFSSIESSTTLSDINEGSIKALTFAILVILICCYKGYNAH 227 Query: 336 ----GVHSNSLGKKVTTCVVQSISIVIIID 361 G ++ T+ VV S +V+I D Sbjct: 228 RRRDGRGPEAVANATTSAVVVSCVLVLIAD 257 >gi|163749276|ref|ZP_02156525.1| hypothetical protein KT99_08438 [Shewanella benthica KT99] gi|161330995|gb|EDQ01921.1| hypothetical protein KT99_08438 [Shewanella benthica KT99] Length = 260 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 75/228 (32%), Positives = 123/228 (53%), Gaps = 2/228 (0%) Query: 144 ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203 A + KG L ++Q+Y VGV + ++++ G V+A QG L FG E ++ Sbjct: 33 AHKPRLKGLPL-FVKQLYVVGVQSMVLILISGLFIGMVLALQGYNILVGFGTEESLGPMV 91 Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263 ++ LRE+G ++TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA Sbjct: 92 ALSLLRELGPVVTALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAG 151 Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMAC 322 ++SLPLLT++ I G IV ++ I F+S ++ +I LIK+ Sbjct: 152 VVSLPLLTLMFTAIGIYGGYIVGVEWKGIDGGSFWSILQASVEWREDIVNCLIKSFLFGI 211 Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +A+ G+ V + + K T VVQS V+ +D L F Sbjct: 212 VVTWIALYRGYQVVPNPEGISKATTQTVVQSSLAVLALDFLLTAIMFG 259 >gi|226943414|ref|YP_002798487.1| organic solvent tolerance ABC efflux transporter, permease [Azotobacter vinelandii DJ] gi|226718341|gb|ACO77512.1| organic solvent tolerance ABC efflux transporter, permease component [Azotobacter vinelandii DJ] Length = 265 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 68/221 (30%), Positives = 127/221 (57%), Gaps = 2/221 (0%) Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210 GF L L++Q++ +GV +P++++ G V+A QG L +G+E L+++ LRE Sbjct: 44 GFQL-LVKQIHSIGVLSLPIIVVSGLFIGMVLALQGYNILVSYGSEQAVGQLVALTLLRE 102 Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 +G ++T ++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +I+PR+WA +S+PLL Sbjct: 103 LGPVVTGLLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIIAPRLWAGFLSMPLL 162 Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAM 329 + N I GA++V + + F++ S+ L ++ G IK+ A + +A+ Sbjct: 163 AAIFNVVGIWGAAMVAVDWLGVYDGSFWASMQSSVDLYDDVVNGAIKSIAFAFVVTWIAV 222 Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +G+ S +G+ T VV + V+ +D + F Sbjct: 223 FQGYDCEPTSEGIGRATTRTVVYASLAVLGLDFILTALMFG 263 >gi|269104097|ref|ZP_06156794.1| uncharacterized ABC transporter permease component YrbE [Photobacterium damselae subsp. damselae CIP 102761] gi|268163995|gb|EEZ42491.1| uncharacterized ABC transporter permease component YrbE [Photobacterium damselae subsp. damselae CIP 102761] Length = 260 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 69/216 (31%), Positives = 120/216 (55%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y VGV + ++++ G V++ QG L FGAE ++++ LRE+G ++ Sbjct: 44 LLKQLYSVGVLSIAIILVSGLFIGMVLSLQGYIVLVDFGAETSLGQMVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+PLL ++ Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVIAPRFWAGVISMPLLAMMFT 163 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G +V + I + ++S S+ + +I GL+KA A + +A+ G+ Sbjct: 164 AVGIWGGQLVGVDWKGIDYGSYWSVMQSSVDVWYDIGNGLLKAVVFAITVTWIAVFNGYD 223 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV S V+ +D + F Sbjct: 224 AVPTSEGISRATTRTVVNSSLAVLGLDFVLTALMFG 259 >gi|91791861|ref|YP_561512.1| hypothetical protein Sden_0497 [Shewanella denitrificans OS217] gi|91713863|gb|ABE53789.1| protein of unknown function DUF140 [Shewanella denitrificans OS217] Length = 265 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 69/216 (31%), Positives = 121/216 (56%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y +GV + ++I+ G V+A QG L FG E ++++ LRE+G ++ Sbjct: 49 LLKQIYVLGVRSMIIIIVSGLFIGMVMALQGYNVLVGFGTEESLGPMVALSLLREMGPVV 108 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+PLL ++ + Sbjct: 109 TALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAIDPLRQVIAPRFWAGVISMPLLAVMFS 168 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334 I G +V ++ I F+S ++ +I LIK+ A + +A+ G+ Sbjct: 169 LVGIYGGHLVGVEWKGIDSGTFWSILQASIEWRQDIVNCLIKSTVFAVVVTWIALYRGYE 228 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 V + + + T+ VVQ+ V+ +D L F Sbjct: 229 VNPNPEGISRATTSTVVQASLAVLGLDFLLTAIMFG 264 >gi|315633782|ref|ZP_07889072.1| toluene efflux ABC superfamily ATP binding cassette transporter, membrane protein [Aggregatibacter segnis ATCC 33393] gi|315477824|gb|EFU68566.1| toluene efflux ABC superfamily ATP binding cassette transporter, membrane protein [Aggregatibacter segnis ATCC 33393] Length = 261 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 70/206 (33%), Positives = 119/206 (57%), Gaps = 1/206 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I+Q++ +GV + +++L G V+ QG L F AE L+++ LRE+G ++T Sbjct: 45 IKQLHVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVT 104 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA II++P+L+I+ Sbjct: 105 ALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGIIAMPILSIIFIA 164 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAV 335 I G S+V + + F+S S+ T + +I G IK+ F A A+ +A+ G+ Sbjct: 165 IGIWGGSLVGVDWKGVDAGSFWSVMQSSVTWSHDILNGTIKSVFFAIAVVWIALFNGYDC 224 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361 S + K T VV + +V+ +D Sbjct: 225 IPTSEGISKATTRTVVHASLVVLGLD 250 >gi|330827998|ref|YP_004390950.1| ABC transporter permease [Aeromonas veronii B565] gi|328803134|gb|AEB48333.1| ABC-type transporter, permease subunit [Aeromonas veronii B565] Length = 259 Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 69/207 (33%), Positives = 115/207 (55%), Gaps = 1/207 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q+Y VGV V ++++ G V++ QG L FGAE L+S+ LRE+G ++ Sbjct: 44 LIQQLYVVGVQSVAIILVSGLFIGMVLSLQGYNVLKDFGAEQSLGPLVSLSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +++PR WA +IS+PLL + + Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLAFMFS 163 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334 I G +V + + F+S ++ +I G IK+ A + +A+ G+ Sbjct: 164 LIGIFGGKLVGVDWLGVDEGGFWSAMQASVDWHEDIMQGAIKSLIFALVVTWIALFNGYD 223 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIID 361 S + + T VV S V+ +D Sbjct: 224 AKPTSAGISQATTRTVVHSSLAVLGLD 250 >gi|117618508|ref|YP_858369.1| putative ABC transporter, permease protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559915|gb|ABK36863.1| putative ABC transporter, permease protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 259 Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 115/207 (55%), Gaps = 1/207 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y VGV V ++++ G V++ QG L FGAE L+S+ LRE+G ++ Sbjct: 44 LVQQLYVVGVQSVAIILVSGLFIGMVLSLQGYNVLKDFGAEQSLGPLVSLSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +++PR WA +IS+PLL + + Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLAFMFS 163 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G +V + + F+S ++ +I G IK+ A + +A+ G+ Sbjct: 164 LIGIFGGKLVGVDWLGVDEGSFWSAMQASVDWQDDIMQGAIKSLIFALVVTWIALFNGYD 223 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIID 361 S + + T VV S V+ +D Sbjct: 224 AKPTSAGISQATTRTVVHSSLAVLGLD 250 >gi|329121164|ref|ZP_08249793.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Dialister micraerophilus DSM 19965] gi|327470327|gb|EGF15786.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Dialister micraerophilus DSM 19965] Length = 253 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 66/212 (31%), Positives = 115/212 (54%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q +GV+ P+V L TG V + Q +L ++GAE + +++I RE+G +L Sbjct: 42 KQCLLLGVNSFPIVFLTLLFTGMVFSAQIVGELVKYGAEFTAGSIVAIGLGRELGPVLCG 101 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 V++AGR G+AI AE+G+M++ E+IDA+R M +D V L+ PR+ A +I LP+L + A Sbjct: 102 VVLAGRVGAAITAELGTMRVTEQIDALRCMAVDPVEYLVLPRVIACMIMLPILDVFAVTI 161 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 + G IV +I +++ S ++++ G+IK F I + G Sbjct: 162 GVGGGMIVASVTGNISSHMYWDSITSFCVASDLYIGMIKTVFFGMIIALTGCDRGITCET 221 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +GK T VV S+ ++ I++ + + F Sbjct: 222 GAEGVGKATTQSVVYSMIMIFIVNYILSTILF 253 >gi|94969917|ref|YP_591965.1| hypothetical protein Acid345_2890 [Candidatus Koribacter versatilis Ellin345] gi|94551967|gb|ABF41891.1| protein of unknown function DUF140 [Candidatus Koribacter versatilis Ellin345] Length = 258 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 64/213 (30%), Positives = 116/213 (54%), Gaps = 1/213 (0%) Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211 +L ++Q +GV +P+VIL F TGA +A + L +FG+ + L+S +RE+ Sbjct: 37 YLSDTLQQADLIGVGSLPIVILAGFFTGAALALNTSATLQKFGSITLTGQLVSYSMVREL 96 Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271 G +LT +M+AGR+ S + +E+GSMK+ E+IDA+R +G D + L++PR+ + ++ L L+ Sbjct: 97 GPVLTGLMVAGRNSSGMASELGSMKVTEQIDAMRALGTDPSKKLVTPRVISTVVMLFFLS 156 Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 I+++ + G I+ W + +++ + ++ GL+K I V Sbjct: 157 IISDLLGMAGGFIISWTLLGLDANQYWTTAYQALVFQDVLMGLVKPVVFGFFIASVGCYY 216 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 G + +G+ T VV + S++II LF Sbjct: 217 GMNATGGTQGVGRATTQAVVTA-SVLIIASDLF 248 >gi|167625602|ref|YP_001675896.1| hypothetical protein Shal_3697 [Shewanella halifaxensis HAW-EB4] gi|167355624|gb|ABZ78237.1| protein of unknown function DUF140 [Shewanella halifaxensis HAW-EB4] Length = 261 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 71/216 (32%), Positives = 119/216 (55%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y VGV + ++++ G V+A QG L FG E ++++ LRE+G ++ Sbjct: 45 LLRQLYVVGVQSMVIILVSGLFIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVV 104 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AE+G MK E++ ++ M +D +R +I+PR WA +ISLPLL ++ Sbjct: 105 TALLFAGRAGSALTAELGLMKSTEQLASLEMMAIDPLRQIIAPRFWAGVISLPLLALMFT 164 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334 I G IV ++ I F+S ++ +I +IK+ A + +A+ G+ Sbjct: 165 AVGIYGGHIVGVEWKGIDSGSFWSILQASVEWREDIVNCMIKSLLFAVVVTWIALYRGYH 224 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 V + + + T VVQS V+ +D L F Sbjct: 225 VIPNPEGISRATTQTVVQSSLAVLALDFLLTAIMFG 260 >gi|322515301|ref|ZP_08068298.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Actinobacillus ureae ATCC 25976] gi|322118677|gb|EFX90889.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Actinobacillus ureae ATCC 25976] Length = 258 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 67/206 (32%), Positives = 116/206 (56%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q+Y +GV + +++L G V+ QG L F AE L+S+ LRE+G ++ Sbjct: 43 LIKQLYVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFAAETSLGTLVSLSLLRELGPVV 102 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+P+L + Sbjct: 103 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRIIAPRFWAGVISMPILAAIFT 162 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I G S+V + + F+S ++ +++ G IK+ A A+ +A+ G+ Sbjct: 163 AIGIWGGSLVGVDWKGVDGGSFWSVMQNSVDWSDLINGFIKSIIFAFAVVWIALFNGYDS 222 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361 S + + T VV + +V+ +D Sbjct: 223 VATSEGISQATTRTVVHASLVVLGLD 248 >gi|284036726|ref|YP_003386656.1| hypothetical protein Slin_1812 [Spirosoma linguale DSM 74] gi|283816019|gb|ADB37857.1| protein of unknown function DUF140 [Spirosoma linguale DSM 74] Length = 271 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 70/213 (32%), Positives = 113/213 (53%), Gaps = 4/213 (1%) Query: 147 YKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206 Y+FK ++RQ Y VG + ++ F+TG V Q LS+FGA + L++I Sbjct: 48 YEFK----EIVRQCYEVGFRSLLLISTTGFITGIVFTNQSRPSLSEFGATSWLPSLIAIA 103 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 +R +G L+TA++ AG+ GS+I AE+GSM + E+IDA+ G D + L+ R+ A + Sbjct: 104 IVRALGPLVTALIAAGKVGSSIGAELGSMNVTEQIDAMEVSGTDPFKFLVVTRVLATSFT 163 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326 +PLLT+ F +IGA I + + F F T +IF ++K+ IG+ Sbjct: 164 IPLLTMYTIFVGLIGAYINVNQNEQTSFTSFMQEVFGAITYLDIFASVLKSIVFGFTIGM 223 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 V +G+ + +GK + VV S+ +V I Sbjct: 224 VGCYKGYHSSKGTEGVGKAANSAVVTSMFLVFI 256 >gi|46143493|ref|ZP_00135103.2| COG0767: ABC-type transport system involved in resistance to organic solvents, permease component [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208757|ref|YP_001053982.1| hypothetical protein APL_1291 [Actinobacillus pleuropneumoniae L20] gi|307248316|ref|ZP_07530341.1| hypothetical protein appser2_12940 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307257357|ref|ZP_07539127.1| hypothetical protein appser10_13550 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307259627|ref|ZP_07541351.1| hypothetical protein appser11_14250 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307261768|ref|ZP_07543434.1| hypothetical protein appser12_13270 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307263956|ref|ZP_07545559.1| hypothetical protein appser13_13640 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|126097549|gb|ABN74377.1| hypothetical protein APL_1291 [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|306855186|gb|EFM87364.1| hypothetical protein appser2_12940 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306864207|gb|EFM96120.1| hypothetical protein appser10_13550 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306866272|gb|EFM98136.1| hypothetical protein appser11_14250 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306868586|gb|EFN00397.1| hypothetical protein appser12_13270 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306870718|gb|EFN02459.1| hypothetical protein appser13_13640 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 234 Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 68/215 (31%), Positives = 118/215 (54%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q+Y +GV + +++L G V+ QG L F AE L+S+ LRE+G ++ Sbjct: 19 LIKQLYVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFAAETSLGTLVSLSLLRELGPVV 78 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+P+L + Sbjct: 79 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRIIAPRFWAGVISMPILAAIFT 138 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I G S+V + + F+S ++ +++ G IK+ A A+ +A+ G+ Sbjct: 139 AIGIWGGSLVGVDWKGVDGGSFWSVMQNSVDWSDLINGFIKSIIFAFAVVWIALFNGYDS 198 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + +V+ +D + F Sbjct: 199 VATSEGISQATTRTVVHASLVVLGLDFILTAIMFG 233 >gi|152978463|ref|YP_001344092.1| hypothetical protein Asuc_0787 [Actinobacillus succinogenes 130Z] gi|150840186|gb|ABR74157.1| protein of unknown function DUF140 [Actinobacillus succinogenes 130Z] Length = 259 Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 66/206 (32%), Positives = 116/206 (56%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q++ +GV + ++++ F G V+ QG L F AE L+++ LRE+G ++ Sbjct: 44 LIKQLHVLGVQSLLIILMSGFFIGMVLGLQGYVVLVDFAAEANVGQLVALALLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +I++P+L +L Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPILAVLFT 163 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 +IG S++ + I F+S + ++ G IK+ A + VA+ G+ Sbjct: 164 AVGVIGGSLIGVDWKGIDGGSFWSVMQNAVASKDLLYGFIKSVVFAFTVVWVALFNGYDC 223 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361 S + + T VV S +V+ +D Sbjct: 224 VPTSEGISQATTKTVVHSSLLVLGLD 249 >gi|145630177|ref|ZP_01785959.1| hypothetical protein CGSHi22421_08998 [Haemophilus influenzae R3021] gi|260581861|ref|ZP_05849657.1| ABC transporter permease [Haemophilus influenzae NT127] gi|144984458|gb|EDJ91881.1| hypothetical protein CGSHi22421_08998 [Haemophilus influenzae R3021] gi|260095054|gb|EEW78946.1| ABC transporter permease [Haemophilus influenzae NT127] Length = 261 Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 72/218 (33%), Positives = 123/218 (56%), Gaps = 1/218 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++QM+ +GV + +++L G V+ QG L F AE L+++ LRE+G ++ Sbjct: 44 LVKQMHVLGVQSLLIILLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+P+L+IL Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPILSILFI 163 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G S+V + + F+S ++ + + +I G IKA F A A+ +A+ G+ Sbjct: 164 AIGIWGGSLVGVDWKGVDSGSFWSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYD 223 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 S + + T VV + +V+ +D + F G Sbjct: 224 CMPTSEGISQATTRTVVHASLVVLGLDFILTAIMFGAG 261 >gi|104780316|ref|YP_606814.1| toluene tolerance ABC efflux transporter permease [Pseudomonas entomophila L48] gi|95109303|emb|CAK14000.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas entomophila L48] Length = 265 Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 64/216 (29%), Positives = 125/216 (57%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y VGV + ++++ G V+A QG L+++G+E ++++ LRE+G ++ Sbjct: 48 LVKQLYSVGVLSLAIIVVSGVFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVV 107 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA ISLPLL ++ + Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFS 167 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G S V + + F+ ++ + + ++ GLIK+ A + +A+ +G+ Sbjct: 168 VVGIWGGSWVAVDWLGVYEGSFWGNMQNSVSFSDDVINGLIKSLVFAFVVTWIAVFQGYD 227 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 228 CEPTSEGISRATTKTVVYASLAVLGLDFILTALMFG 263 >gi|165976711|ref|YP_001652304.1| permease [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|303250627|ref|ZP_07336824.1| permease [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303252079|ref|ZP_07338248.1| permease [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307246209|ref|ZP_07528290.1| hypothetical protein appser1_14130 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307250543|ref|ZP_07532487.1| hypothetical protein appser4_13230 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307252926|ref|ZP_07534814.1| hypothetical protein appser6_14370 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307255189|ref|ZP_07537007.1| hypothetical protein appser9_14250 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|165876812|gb|ABY69860.1| probable permease [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|302649061|gb|EFL79248.1| permease [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302650615|gb|EFL80774.1| permease [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306852818|gb|EFM85042.1| hypothetical protein appser1_14130 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306857436|gb|EFM89548.1| hypothetical protein appser4_13230 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306859564|gb|EFM91589.1| hypothetical protein appser6_14370 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306862062|gb|EFM94038.1| hypothetical protein appser9_14250 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] Length = 258 Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 67/206 (32%), Positives = 116/206 (56%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q+Y +GV + +++L G V+ QG L F AE L+S+ LRE+G ++ Sbjct: 43 LIKQLYVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFAAETSLGTLVSLSLLRELGPVV 102 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+P+L + Sbjct: 103 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRIIAPRFWAGVISMPILAAIFT 162 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I G S+V + + F+S ++ +++ G IK+ A A+ +A+ G+ Sbjct: 163 AIGIWGGSLVGVDWKGVDGGSFWSVMQNSVDWSDLINGFIKSIIFAFAVVWIALFNGYDS 222 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361 S + + T VV + +V+ +D Sbjct: 223 VATSEGISQATTRTVVHASLVVLGLD 248 >gi|114564530|ref|YP_752044.1| hypothetical protein Sfri_3369 [Shewanella frigidimarina NCIMB 400] gi|114335823|gb|ABI73205.1| protein of unknown function DUF140 [Shewanella frigidimarina NCIMB 400] Length = 261 Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 121/216 (56%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q+Y +GV + ++++ G V+A QG L +FG E ++++ LRE+G ++ Sbjct: 45 LIKQVYVLGVRSMVIILVSGLFIGMVLALQGYNILVEFGTEESLGPMVALSLLRELGPVV 104 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+PLL ++ + Sbjct: 105 AALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLALMFS 164 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334 I+G +V ++ I F+S ++ +I LIK+ + +A+ G+ Sbjct: 165 LVGILGGHLVGVEWKGIDSGAFWSILRASVEWREDIVNCLIKSVIFGVVVTWIALYRGYE 224 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 V + + + T+ VVQ+ V+ +D L F Sbjct: 225 VQPNPEGISRATTSTVVQASLAVLALDFLLTAIMFG 260 >gi|212703465|ref|ZP_03311593.1| hypothetical protein DESPIG_01509 [Desulfovibrio piger ATCC 29098] gi|212673125|gb|EEB33608.1| hypothetical protein DESPIG_01509 [Desulfovibrio piger ATCC 29098] Length = 264 Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 121/216 (56%), Gaps = 5/216 (2%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I+Q+Y +G + V++LI G V+ QG + L QFG+ +S+ +RE+G +LT Sbjct: 47 IQQLYVIGYKSLFVILLIGIFCGMVLGLQGYYTLVQFGSVGMLGSAVSLSLIRELGPVLT 106 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A+M+AGR+GS++ AEIG M+I+++IDA+ M ++ + L+SPR+ A +++ PLLT + + Sbjct: 107 AIMLAGRAGSSMAAEIGVMRISDQIDALDVMDINSMAYLVSPRLVASLLAFPLLTAIFDV 166 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 IIG + I + R S+ T+ ++ G IK+ + V +G+ Sbjct: 167 IGIIGGYLTGVLMLHINEGAYLYRIASSVTMNDVAGGFIKSLVFGLLVATVCCHQGYTTH 226 Query: 337 VHSNSLGKK-----VTTCVVQSISIVIIIDSLFAIF 367 + +S+G + T+ VV S ++++ D + F Sbjct: 227 MRRDSVGPEAVGNATTSAVVISCVLILVADYVLTSF 262 >gi|282891606|ref|ZP_06300097.1| hypothetical protein pah_c180o100 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498574|gb|EFB40902.1| hypothetical protein pah_c180o100 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 262 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 72/206 (34%), Positives = 117/206 (56%), Gaps = 1/206 (0%) Query: 155 SLIR-QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 SLIR QM+ +GV +PVV + F TG V+A Q FQLS G + +++ + E+G Sbjct: 33 SLIRDQMFEIGVMSLPVVAITGFSTGLVLAAQSFFQLSDKGLASATGLMVTKAMMVELGP 92 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 +LTA M+ GR G+++ AE+G+M++ E+IDA+R+M ++ +R LI+PR A LPLLTI Sbjct: 93 ILTAFMVTGRVGASMCAELGTMRVTEQIDALRSMSVNPLRYLIAPRFIAGTTMLPLLTIF 152 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 + I+G ++ YY +P + F ++ +GLIKA I ++ G Sbjct: 153 SCLMGILGGYLLSVYYYQMPPSTFLDPLPLHIKTFDMVSGLIKAFIFGIIIITISCYRGL 212 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVII 359 + + +G+ T VV S+++I Sbjct: 213 STRGGAAGVGRATTNSVVICYSVILI 238 >gi|319897434|ref|YP_004135631.1| abc-type transport system protein, permease component [Haemophilus influenzae F3031] gi|317432940|emb|CBY81307.1| conserved ABC-type transport system protein,permease component [Haemophilus influenzae F3031] Length = 261 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 72/218 (33%), Positives = 123/218 (56%), Gaps = 1/218 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++QM+ +GV + +++L G V+ QG L F AE L+++ LRE+G ++ Sbjct: 44 LVKQMHVLGVQSLLIILLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+P+L+IL Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPVLSILFI 163 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G S+V + + F+S ++ + + +I G IKA F A A+ +A+ G+ Sbjct: 164 AIGIWGGSLVGVDWKGVDSGSFWSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYD 223 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 S + + T VV + +V+ +D + F G Sbjct: 224 CMPTSEGISQATTRTVVHASLVVLGLDFILTAIMFGAG 261 >gi|145640771|ref|ZP_01796354.1| hypothetical protein CGSHiR3021_06880 [Haemophilus influenzae R3021] gi|319776661|ref|YP_004139149.1| ABC transporter permease [Haemophilus influenzae F3047] gi|329124179|ref|ZP_08252726.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Haemophilus aegyptius ATCC 11116] gi|145274697|gb|EDK14560.1| hypothetical protein CGSHiR3021_06880 [Haemophilus influenzae 22.4-21] gi|317451252|emb|CBY87486.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae F3047] gi|327467604|gb|EGF13102.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Haemophilus aegyptius ATCC 11116] Length = 261 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 72/218 (33%), Positives = 123/218 (56%), Gaps = 1/218 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++QM+ +GV + +++L G V+ QG L F AE L+++ LRE+G ++ Sbjct: 44 LVKQMHVLGVQSLLIILLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+P+L+IL Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPVLSILFI 163 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G S+V + + F+S ++ + + +I G IKA F A A+ +A+ G+ Sbjct: 164 AIGIWGGSLVGVDWKGVDSGSFWSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYD 223 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 S + + T VV + +V+ +D + F G Sbjct: 224 CMPTSEGISQATTRTVVHASLVVLGLDFILTAIMFGAG 261 >gi|310817867|ref|YP_003950225.1| ABC transporter permease [Stigmatella aurantiaca DW4/3-1] gi|309390939|gb|ADO68398.1| ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1] Length = 250 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 64/206 (31%), Positives = 117/206 (56%), Gaps = 3/206 (1%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGV 213 +L+ ++GV +P+ +L S G VI+ Q F L++FG + +++ + +L L RE+ Sbjct: 34 ALVYHTEFLGVRSMPIALLTSTFAGLVISLQFGFFLARFGVQ-YTVGRVVVLTLFRELAP 92 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 +LTA+ + R GS + AE+G+M + E++DAIR +G D +R L+ PR+ A ++ +P LT+L Sbjct: 93 VLTALTVGARIGSGMAAELGAMTVTEQVDAIRALGADPLRKLVVPRVLACLLVMPTLTVL 152 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 A+ + ++V+ Y I F +FF + + +G+IK IG+V +G Sbjct: 153 ADVIGLGAGALVVNMQYAISFDLFFQGALDAVLMTDFVSGVIKGAIFGVIIGLVGCFKGL 212 Query: 334 AVGVHSNSLGKKVT-TCVVQSISIVI 358 V + +G+ T T + S+S+ + Sbjct: 213 TVEGGTEGVGRATTQTVAITSVSVCL 238 >gi|121534945|ref|ZP_01666764.1| protein of unknown function DUF140 [Thermosinus carboxydivorans Nor1] gi|121306544|gb|EAX47467.1| protein of unknown function DUF140 [Thermosinus carboxydivorans Nor1] Length = 256 Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 69/229 (30%), Positives = 118/229 (51%), Gaps = 1/229 (0%) Query: 142 FCASSYKFKGFLLSL-IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSI 200 F + Y + F L L +RQ ++GV +P+V+L TG V+ Q A + ++GA+ Sbjct: 27 FTETIYHLRRFNLKLTLRQAAHLGVDSLPIVLLTILFTGMVMTVQTAHEFIKYGAQSSVG 86 Query: 201 DLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRI 260 ++++ RE+ +LT V+ AGR G+AI AEIGSMK+ E+IDA+R M + + L+ PR+ Sbjct: 87 GVVAVAMGRELAPVLTGVVAAGRVGAAITAEIGSMKVTEQIDALRVMATNPIAYLVVPRL 146 Query: 261 WALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320 A + LP+L + A+ G +V Y I + + ++ GLIKA Sbjct: 147 VACVFMLPILVVFADVIGTFGGYLVATLYAGIGSFTYLHSIKVFTAINDVTGGLIKAMVF 206 Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 I I+ +G + +G+ T VV SI ++ + + ++ + Sbjct: 207 GAIIAIIGCYKGLTTDEGAEGVGRATTGSVVASIILIFVTNYFLSLLLY 255 >gi|157373873|ref|YP_001472473.1| hypothetical protein Ssed_0734 [Shewanella sediminis HAW-EB3] gi|157316247|gb|ABV35345.1| protein of unknown function DUF140 [Shewanella sediminis HAW-EB3] Length = 260 Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 74/228 (32%), Positives = 123/228 (53%), Gaps = 2/228 (0%) Query: 144 ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203 A + KGF L ++Q+Y VGV + ++ + G V+A QG L FG E ++ Sbjct: 33 ARKPRIKGFPL-FVKQLYVVGVQSMVLIFVSGLFIGMVLALQGYNILVGFGTEESLGPMV 91 Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263 ++ LRE+G ++TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA Sbjct: 92 ALSLLRELGPVVTALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAG 151 Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMAC 322 ++SLPLL ++ I G +V ++ I F+S ++ +I +IK+ A Sbjct: 152 VVSLPLLALIFTAVGIYGGHVVGVEWKGIDSGSFWSILQASVEWREDIVNCIIKSLVFAV 211 Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +A+ G+ V + + K T VVQS V+ +D L F Sbjct: 212 VVTWIALYRGYRVIPNPEGISKATTQTVVQSSLAVLALDFLLTAVMFG 259 >gi|190150611|ref|YP_001969136.1| hypothetical protein APP7_1342 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|189915742|gb|ACE61994.1| hypothetical protein APP7_1342 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] Length = 276 Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 67/206 (32%), Positives = 116/206 (56%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q+Y +GV + +++L G V+ QG L F AE L+S+ LRE+G ++ Sbjct: 61 LIKQLYVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFAAETSLGTLVSLSLLRELGPVV 120 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+P+L + Sbjct: 121 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRIIAPRFWAGVISMPILAAIFT 180 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I G S+V + + F+S ++ +++ G IK+ A A+ +A+ G+ Sbjct: 181 AIGIWGGSLVGVDWKGVDGGSFWSVMQNSVDWSDLINGFIKSIIFAFAVVWIALFNGYDS 240 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361 S + + T VV + +V+ +D Sbjct: 241 VATSEGISQATTRTVVHASLVVLGLD 266 >gi|115378323|ref|ZP_01465489.1| ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1] gi|115364677|gb|EAU63746.1| ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1] Length = 274 Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 64/206 (31%), Positives = 117/206 (56%), Gaps = 3/206 (1%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGV 213 +L+ ++GV +P+ +L S G VI+ Q F L++FG + +++ + +L L RE+ Sbjct: 58 ALVYHTEFLGVRSMPIALLTSTFAGLVISLQFGFFLARFGVQ-YTVGRVVVLTLFRELAP 116 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 +LTA+ + R GS + AE+G+M + E++DAIR +G D +R L+ PR+ A ++ +P LT+L Sbjct: 117 VLTALTVGARIGSGMAAELGAMTVTEQVDAIRALGADPLRKLVVPRVLACLLVMPTLTVL 176 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 A+ + ++V+ Y I F +FF + + +G+IK IG+V +G Sbjct: 177 ADVIGLGAGALVVNMQYAISFDLFFQGALDAVLMTDFVSGVIKGAIFGVIIGLVGCFKGL 236 Query: 334 AVGVHSNSLGKKVT-TCVVQSISIVI 358 V + +G+ T T + S+S+ + Sbjct: 237 TVEGGTEGVGRATTQTVAITSVSVCL 262 >gi|144898324|emb|CAM75188.1| ABC transporter permease protein [Magnetospirillum gryphiswaldense MSR-1] Length = 267 Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 66/210 (31%), Positives = 120/210 (57%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 S+ Q +G++ +P++ ++S G ++A QG + L FGAE +++ +RE L Sbjct: 52 SVAAQAMDIGIAALPIITVLSTTIGLMLAIQGIYTLKTFGAESRVTLGVALSVVREFAPL 111 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +T +++AGRSGSA+ A +G+M+IN+EID++ MG++ VR L++P + A+++ +PLLT+ A Sbjct: 112 ITGILVAGRSGSALAARLGTMRINQEIDSLTVMGINPVRFLVAPPLAAMMVLMPLLTLWA 171 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 + + A + I A + S L ++ GL K+ + IV + G + Sbjct: 172 DLVGLFAAGLYISIELQGTMAGYADEVLSLLKLNDLLHGLAKSAIFGVLVTIVGVVNGAS 231 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 V + +G+ T VV +IS ++I D +F Sbjct: 232 VSGGAEGVGRMTTRSVVHAISAIVITDMIF 261 >gi|198282478|ref|YP_002218799.1| hypothetical protein Lferr_0338 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667295|ref|YP_002424668.1| toluene tolerance protein Ttg2B, putative [Acidithiobacillus ferrooxidans ATCC 23270] gi|198246999|gb|ACH82592.1| protein of unknown function DUF140 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519508|gb|ACK80094.1| toluene tolerance protein Ttg2B, putative [Acidithiobacillus ferrooxidans ATCC 23270] Length = 260 Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 72/265 (27%), Positives = 142/265 (53%), Gaps = 8/265 (3%) Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 +F ++G++ ++ + + + + L L + F ++ F + L++Q+Y GV Sbjct: 2 AFMEFIPNLGRRTLRTVPNLGTASRFLLLSL-----FAVANRHFS--IQQLLKQVYGFGV 54 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 + ++++ +F TG V+ QG + L +FGA L+++ LRE+G +LTA++ AGR+G Sbjct: 55 RSLLLMMVAAFFTGMVLGFQGYYALVRFGATSALGTLVALSLLRELGPVLTALLFAGRAG 114 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 SA+ AEI SMK E++ A+ M ++ + +++PR+WA I+ +P+L ++ + I G ++ Sbjct: 115 SALTAEISSMKATEQLSAMEMMAVNPLAWVVAPRLWAGILVVPILCVIFDLVGIFGGYLI 174 Query: 286 IWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 + F+++ S + +I TGL KA + +A +G+A + +G Sbjct: 175 SVPVLGVDGGTFWAQMQSNVAFSGDILTGLFKALCFGLVVTWIAAWQGYAAQPTAEGVGN 234 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYF 369 T VV + V+ +D + F F Sbjct: 235 ATTISVVTASLAVLGLDFILTAFLF 259 >gi|94264494|ref|ZP_01288281.1| Protein of unknown function DUF140 [delta proteobacterium MLMS-1] gi|94266598|ref|ZP_01290280.1| Protein of unknown function DUF140 [delta proteobacterium MLMS-1] gi|93452769|gb|EAT03307.1| Protein of unknown function DUF140 [delta proteobacterium MLMS-1] gi|93455053|gb|EAT05280.1| Protein of unknown function DUF140 [delta proteobacterium MLMS-1] Length = 263 Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 70/216 (32%), Positives = 117/216 (54%), Gaps = 6/216 (2%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 ++RQ +G + +PV+ + TG V+ QG + L QFGAE +++ +RE+G + Sbjct: 43 EVVRQTRLIGANSLPVIFFTAAFTGMVLGLQGYYTLRQFGAESALGSAVALSLIRELGPV 102 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 LTA+M+ GR+GSA+ AEIG M+ +E+IDA+ M +D R LI+P++ A +IS+PLLT++ Sbjct: 103 LTALMVIGRAGSAMCAEIGIMRNSEQIDALECMAVDPFRYLIAPKLLATMISIPLLTLIF 162 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 N I G + + +F+ + A+I G+IK+ A + + G+ Sbjct: 163 NVVGIFGGYVAGVMLLGVNPGSYFAGMEQSVVDADIRMGIIKSLVFALLVVWICTARGYY 222 Query: 335 V------GVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 V G + + + T VV S V++ D L Sbjct: 223 VHAIRGAGFGAEGVSRATTQAVVFSSISVLLFDYLL 258 >gi|254362425|ref|ZP_04978534.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica PHL213] gi|261494094|ref|ZP_05990597.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496065|ref|ZP_05992475.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|153094014|gb|EDN74930.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica PHL213] gi|261308315|gb|EEY09608.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261310260|gb|EEY11460.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 258 Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 77/263 (29%), Positives = 134/263 (50%), Gaps = 9/263 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHIL-GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167 N IG ++ FI A +L G +I +F+ LI+Q+Y +GV Sbjct: 3 NFISSIGAVVINFIRTLGRSAFMLWGALIGKP--------EFRKHTPLLIKQLYVLGVQS 54 Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 + +++L G V+ QG L F AE L+S+ LRE+G ++TA++ AGR+GSA Sbjct: 55 LLIIMLSGLFIGMVLGLQGYVVLVDFAAESSLGTLVSLSLLRELGPVVTALLFAGRAGSA 114 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + AEIG MK E++ ++ M +D +R +I+PR WA +IS+P+L + I G S+V Sbjct: 115 LTAEIGLMKATEQLSSLEMMAVDPLRRIIAPRFWAGVISMPVLAAIFTAIGIWGGSLVGV 174 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + F+S ++ +++ G IK+ A A+ +A+ G+ S + + T Sbjct: 175 DWKGVDGGSFWSVMQNSVNTSDLINGFIKSVIFAFAVVWIALFNGYDCVPTSEGISQATT 234 Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370 VV + +++ +D + F Sbjct: 235 RTVVNASLVILGLDFILTAIMFG 257 >gi|182412508|ref|YP_001817574.1| hypothetical protein Oter_0685 [Opitutus terrae PB90-1] gi|177839722|gb|ACB73974.1| protein of unknown function DUF140 [Opitutus terrae PB90-1] Length = 250 Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 62/208 (29%), Positives = 115/208 (55%), Gaps = 2/208 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI Q + +G + +P+V ++SF G+V+A Q + + GA+ + L+ + RE+G ++ Sbjct: 35 LIEQCFTIGYTTLPIVAILSFFIGSVLALQAGYAMQNVGAKQYIGSLVGLSMARELGPVM 94 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A+++AGR GS+I AE+ SMK+ +E+DA+ TM + R+L+ PR+ A++ +P+L ++AN Sbjct: 95 VAILLAGRVGSSIAAELASMKVYQEVDALVTMNIPPERMLVLPRLIAVLFMMPVLVMIAN 154 Query: 276 FSAIIGASIVI--WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 G +IV + I +F+ ++ GLIKA + +V G Sbjct: 155 LVGWFGGAIVAKYTTFISIDPPAYFAVLRRYTEFKDVLNGLIKAEVFGFGVVLVCCNIGL 214 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIID 361 +G VT VV S+ ++++++ Sbjct: 215 NTRGGPREIGAAVTQAVVTSLILILVLN 242 >gi|16273014|ref|NP_439243.1| ABC transporter permease [Haemophilus influenzae Rd KW20] gi|260580171|ref|ZP_05848001.1| conserved hypothetical protein [Haemophilus influenzae RdAW] gi|1176838|sp|P45030|Y1086_HAEIN RecName: Full=Probable ABC transporter permease protein HI_1086 gi|1574640|gb|AAC22742.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20] gi|260093455|gb|EEW77388.1| conserved hypothetical protein [Haemophilus influenzae RdAW] Length = 261 Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 72/218 (33%), Positives = 123/218 (56%), Gaps = 1/218 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++QM+ +GV + +++L G V+ QG L F AE L+++ LRE+G ++ Sbjct: 44 LVKQMHVLGVQSLLIILLSGLFIGMVLGLQGYVVLIDFSAETSLGQLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+P+L+IL Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPVLSILFI 163 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G S+V + + F+S ++ + + +I G IKA F A A+ +A+ G+ Sbjct: 164 AIGIWGGSLVGVDWKGVDSGSFWSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYD 223 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 S + + T VV + +V+ +D + F G Sbjct: 224 CMPTSEGISQATTRTVVHASLVVLGLDFILTAIMFGAG 261 >gi|319789984|ref|YP_004151617.1| protein of unknown function DUF140 [Thermovibrio ammonificans HB-1] gi|317114486|gb|ADU96976.1| protein of unknown function DUF140 [Thermovibrio ammonificans HB-1] Length = 260 Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 68/213 (31%), Positives = 117/213 (54%), Gaps = 3/213 (1%) Query: 154 LSLIRQMYY---VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210 L L R +YY +G +PV+ + S TG VIA + +F AE +++I RE Sbjct: 38 LRLKRFIYYLATIGSDSIPVIAVTSLFTGGVIALETYNAFHRFNAEFMIGAVVAISMARE 97 Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 + +L+A+++ RSGSA+ AEIG+M++ E+IDA+ M ++ ++ LI+PRI+A ISL L Sbjct: 98 LSPVLSALLVTARSGSAMAAEIGTMRVTEQIDALEMMAVNPIKFLITPRIYATTISLVFL 157 Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330 T++A+ IG +V + + ++ + A + ++F GLIKA + ++ Sbjct: 158 TVIADIIGYIGGYLVSVHIFGVNKTLYLRYTQNFAHMEDVFHGLIKAAVFGFLLSTISCL 217 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 G+ + +G+ T VV S ++I D L Sbjct: 218 YGYYTRGGAKGVGESTTKAVVSSSIAILIFDYL 250 >gi|303327433|ref|ZP_07357874.1| ABC transporter, permease protein [Desulfovibrio sp. 3_1_syn3] gi|302862373|gb|EFL85306.1| ABC transporter, permease protein [Desulfovibrio sp. 3_1_syn3] Length = 375 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 66/217 (30%), Positives = 118/217 (54%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + MY GV +P++ + S + G ++A GA QL+QFGA+I+ L+ I LR +G ++ Sbjct: 159 VAAMYECGVQALPIISVTSMLFGLILAFVGAVQLTQFGAQIYVAGLVGIGMLRVMGAVMV 218 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 V+++GR G+A A IG+M++NEE+DA+ T+G+ V L+ PR+ AL +PLLT+ A+ Sbjct: 219 GVVMSGRVGAAYAALIGTMQVNEEVDALATLGISPVDFLVLPRVLALTAMVPLLTLYADL 278 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 ++G +V D+ + + ++ GL+ I + +G G Sbjct: 279 MGVLGGYLVGVMMLDLNPMEYINATTQMVPFKHVLIGLVYGTVFGVVIAVAGCYQGMRCG 338 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + ++G+ TT VV SI +I+ + + +G+ Sbjct: 339 RSAQAVGQATTTAVVHSIVGIIVATAAITVICNVLGV 375 >gi|90413007|ref|ZP_01221005.1| hypothetical protein P3TCK_24185 [Photobacterium profundum 3TCK] gi|90326022|gb|EAS42461.1| hypothetical protein P3TCK_24185 [Photobacterium profundum 3TCK] Length = 260 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 69/216 (31%), Positives = 119/216 (55%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y VGV + ++++ G V++ QG L FGAE ++++ LRE+G ++ Sbjct: 44 LMKQLYSVGVLSIAIIMVSGLFIGMVLSLQGYIVLVDFGAETSLGQMVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+PLL ++ + Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVIAPRFWAGVISMPLLAMMFS 163 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G +V + I + F+S ++ L +I IK+ A I +A+ G+ Sbjct: 164 AVGIWGGQLVGVDWKGIDYGSFWSVMQASVELGEDIGNSFIKSVVFAITITWIAVFNGYD 223 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV S V+ +D + F Sbjct: 224 AVPTSEGISRATTRTVVNSSLAVLGLDFVLTALMFG 259 >gi|218710669|ref|YP_002418290.1| ABC transport protein: transmembrane protein (IM) [Vibrio splendidus LGP32] gi|218323688|emb|CAV20020.1| ABC transport protein: transmembrane protein (IM) [Vibrio splendidus LGP32] Length = 261 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 73/224 (32%), Positives = 122/224 (54%), Gaps = 2/224 (0%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 K K F L L++Q Y VGV + ++++ G V++ QG L +GAE ++++ Sbjct: 38 KLKNFPL-LVKQFYSVGVQSLAIILVSGLFIGMVLSLQGYVVLIDYGAEGNLGQMVALSL 96 Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267 LRE+G ++TA++ AGR+GSA+ AEIG MK E+I ++ M +D ++ +I+PR+WA +IS+ Sbjct: 97 LRELGPVVTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLKRIIAPRLWAGLISM 156 Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGI 326 PLL ++ I GA +V + I F+S S+ L +I +IK A + Sbjct: 157 PLLAMIFMAVGIWGAQLVGVDWKGIDHGSFWSAMQSSVELGRDIGNSMIKCMVFAITVTW 216 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +A+ G+ S + + T VV S V+ +D + F Sbjct: 217 IALFNGYDAVPTSEGISQATTRTVVHSSLAVLGLDFVLTALMFG 260 >gi|127514231|ref|YP_001095428.1| hypothetical protein Shew_3303 [Shewanella loihica PV-4] gi|126639526|gb|ABO25169.1| protein of unknown function DUF140 [Shewanella loihica PV-4] Length = 261 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 71/216 (32%), Positives = 119/216 (55%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q+Y +GV + ++++ G V+A QG L FG E ++++ LRE+G ++ Sbjct: 45 LIKQLYVIGVQSMVIILVSGLFIGMVLALQGYNILVGFGTEDSLGPMVALSLLRELGPVV 104 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +ISLPLL ++ Sbjct: 105 TALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAIDPLRQVIAPRFWAGVISLPLLALMFT 164 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334 I G +V ++ I F+S ++ +I LIK+ A + +A+ G+ Sbjct: 165 AVGIYGGHLVGVEWKGIDSGSFWSILQASVEWRQDIVNCLIKSLVFAVVVTWIALYRGYH 224 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 V + + + T VVQS V+ +D L F Sbjct: 225 VIPNPEGISRATTQTVVQSSLAVLALDFLLTAMMFG 260 >gi|71282011|ref|YP_271183.1| hypothetical protein CPS_4535 [Colwellia psychrerythraea 34H] gi|71147751|gb|AAZ28224.1| putative membrane protein [Colwellia psychrerythraea 34H] Length = 258 Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 69/215 (32%), Positives = 120/215 (55%), Gaps = 1/215 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y VGV + ++++ G V+A QG L +GAE ++++ LRE+G ++ Sbjct: 42 LMQQLYSVGVLSLLIIVVSGTFIGMVLALQGYTILVGYGAEASLGPMVALSLLRELGPVV 101 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA ISLPLL + + Sbjct: 102 AALLFAGRAGSALTAEIGLMKATEQLSSLEMMAIDPLRRVIAPRFWAGFISLPLLAAIFS 161 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334 I+GA +V + + F+S +I G+IK+ A + +A+ +G+ Sbjct: 162 MVGILGAHVVGVDWLGVDGGTFWSVMQDQVDFQKDILNGIIKSIVFAFVVMWIAVYKGYD 221 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 S + + T+ VVQS +V+ +D + F Sbjct: 222 CEPTSEGISRATTSTVVQSSLLVLFLDFILTALMF 256 >gi|260596176|ref|YP_003208747.1| hypothetical protein CTU_03840 [Cronobacter turicensis z3032] gi|260215353|emb|CBA27350.1| UPF0393 inner membrane protein yrbE [Cronobacter turicensis z3032] Length = 262 Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 84/265 (31%), Positives = 140/265 (52%), Gaps = 12/265 (4%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 NL +G++ +KF + S +A GL++ N +F+ L+RQ+Y+VGV + Sbjct: 6 NLLASMGQRGLKF-SASFGRA---GLMLFNA---IVGKPEFRKHGPLLVRQLYHVGVLSM 58 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++I+ G V+ QG L+ +GAE L+++ LRE+G ++ A++ AGR+GSA+ Sbjct: 59 IIIIVSGLFIGMVLGLQGYLVLTTYGAETSLGMLVALSLLRELGPVVAALLFAGRAGSAL 118 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI--VI 286 AEIG MK E++ ++ M +D +R +ISPR WA +ISLPLLT++ + G S+ V Sbjct: 119 TAEIGLMKATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGVWGGSLVGVN 178 Query: 287 WKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 WK D F F+S ++ LIK+ A + +A+ G+ S + + Sbjct: 179 WKGIDAGF--FWSAMQDAVDWRMDLINCLIKSVVFAITVTWIALFNGYDAIPTSAGISRA 236 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + V+ +D + F Sbjct: 237 TTRTVVHASLAVLGLDFVLTALMFG 261 >gi|86147572|ref|ZP_01065882.1| putative ABC superfamily transport protein [Vibrio sp. MED222] gi|85834611|gb|EAQ52759.1| putative ABC superfamily transport protein [Vibrio sp. MED222] Length = 259 Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 73/224 (32%), Positives = 122/224 (54%), Gaps = 2/224 (0%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 K K F L L++Q Y VGV + ++++ G V++ QG L +GAE ++++ Sbjct: 36 KLKNFPL-LVKQFYSVGVQSLAIILVSGLFIGMVLSLQGYVVLIDYGAEGNLGQMVALSL 94 Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267 LRE+G ++TA++ AGR+GSA+ AEIG MK E+I ++ M +D ++ +I+PR+WA +IS+ Sbjct: 95 LRELGPVVTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLKRIIAPRLWAGLISM 154 Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGI 326 PLL ++ I GA +V + I F+S S+ L +I +IK A + Sbjct: 155 PLLAMIFMAVGIWGAQLVGVDWKGIDHGSFWSAMQSSVELGRDIGNSMIKCMVFAITVTW 214 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +A+ G+ S + + T VV S V+ +D + F Sbjct: 215 IALFNGYDAVPTSEGISQATTRTVVHSSLAVLGLDFVLTALMFG 258 >gi|68249643|ref|YP_248755.1| ABC transporter permease [Haemophilus influenzae 86-028NP] gi|68057842|gb|AAX88095.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae 86-028NP] gi|309973443|gb|ADO96644.1| Phospholipid ABC transporter, permease component [Haemophilus influenzae R2846] Length = 261 Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 70/207 (33%), Positives = 121/207 (58%), Gaps = 1/207 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++QM+ +GV + +++L G V+ QG L F AE L+++ LRE+G ++ Sbjct: 44 LVKQMHVLGVQSLLIILLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+P+L+IL Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPILSILFI 163 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G+S+V + + F+S ++ + + +I G IKA F A A+ +A+ G+ Sbjct: 164 AIGIWGSSLVGVDWKGVDSGSFWSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYD 223 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIID 361 S + + T VV + +V+ +D Sbjct: 224 CMPTSEGISQATTRTVVHASLVVLGLD 250 >gi|148828248|ref|YP_001293001.1| ABC transporter permease [Haemophilus influenzae PittGG] gi|148719490|gb|ABR00618.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae PittGG] Length = 261 Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 70/207 (33%), Positives = 120/207 (57%), Gaps = 1/207 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++QM+ +GV + +++L G V+ QG L F AE L+++ LRE+G ++ Sbjct: 44 LVKQMHVLGVQSLLIILLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+P+L+IL Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPILSILFI 163 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G S+V + + F+S ++ + + +I G IKA F A A+ +A+ G+ Sbjct: 164 AIGIWGGSLVGVDWKGVDSGSFWSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYD 223 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIID 361 S + + T VV + +V+ +D Sbjct: 224 CMPTSEGISQATTRTVVHASLVVLGLD 250 >gi|146313264|ref|YP_001178338.1| hypothetical protein Ent638_3630 [Enterobacter sp. 638] gi|145320140|gb|ABP62287.1| protein of unknown function DUF140 [Enterobacter sp. 638] Length = 260 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 76/218 (34%), Positives = 118/218 (54%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y VGV + ++I+ G V+ QG L+ + AE L+++ LRE+G ++ Sbjct: 44 LVRQLYNVGVLSMLIIIVSGLFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ AGR+GSA+ AEIG M+ E++ ++ M +D +R +ISPR WA +ISLPLLTIL Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTILFV 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 I G S+ V WK D F F+S L ++ LIK+ A + +A+ G Sbjct: 164 AVGIWGGSLVGVQWKGIDAGF--FWSAMQDAVDLRMDLVNCLIKSVVFAFTVTWIALFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV S V+ +D + F Sbjct: 222 YDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|218885146|ref|YP_002434467.1| hypothetical protein DvMF_0038 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756100|gb|ACL06999.1| protein of unknown function DUF140 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 381 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 61/181 (33%), Positives = 105/181 (58%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++ M G + +P+V LIS + G ++A GA QL FGA+I+ L++I +R +G ++ Sbjct: 164 LLQFMSESGSAALPIVSLISMLVGLILAFVGAVQLRVFGAQIYVASLVAIAMVRVMGAIM 223 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 T + +AGR+G++ A +G+M++NEE+DA+ TMGL V L+ PR+ AL++ LPLLT+ A+ Sbjct: 224 TGITMAGRTGASYAAILGTMQVNEEVDALATMGLRPVEQLVLPRLLALVVMLPLLTVYAD 283 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 ++G IV D+ + + +LAN++ G+ + + G Sbjct: 284 LMGMLGGFIVGVFMLDLNPMEYLNATREALSLANLWIGITHGAVFGVVVALCGCYHGMRC 343 Query: 336 G 336 G Sbjct: 344 G 344 >gi|225848307|ref|YP_002728470.1| toluene tolerance protein Ttg2B [Sulfurihydrogenibium azorense Az-Fu1] gi|225643396|gb|ACN98446.1| putative toluene tolerance protein Ttg2B [Sulfurihydrogenibium azorense Az-Fu1] Length = 247 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 69/215 (32%), Positives = 115/215 (53%), Gaps = 2/215 (0%) Query: 149 FKGF--LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206 FK F L +++ M +GV+ ++IL F TG V+ + +F AE L+S+ Sbjct: 25 FKRFPKLKHILKYMEDIGVNAALLIILTGFFTGGVLVVETYPTFHKFNAEYLMGALVSLS 84 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 RE+ +L A+++ RSGSAI A IG+M+I E+IDA+ M ++ L+SPR+ A ++ Sbjct: 85 LARELSPVLVALLVTARSGSAIAANIGTMRITEQIDALEVMAVNPYSYLVSPRLIAAVVM 144 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326 +P LT+L+ S +IG Y I +++ + L +IF GL KA + I Sbjct: 145 VPALTVLSYVSGVIGGYFTSVYIYGINEYMYWEKLKDFTELKDIFGGLYKAAVFGAVLTI 204 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 V G+ + +G+ TT VV + +++I+D Sbjct: 205 VTSYFGYITKGGAEGVGRSTTTAVVVASVLILILD 239 >gi|145627949|ref|ZP_01783750.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae 22.1-21] gi|145632451|ref|ZP_01788186.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae 3655] gi|145634244|ref|ZP_01789955.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae PittAA] gi|145636462|ref|ZP_01792130.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae PittHH] gi|145638100|ref|ZP_01793710.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae PittII] gi|148826300|ref|YP_001291053.1| ABC transporter permease [Haemophilus influenzae PittEE] gi|229843875|ref|ZP_04464016.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae 6P18H1] gi|229846118|ref|ZP_04466230.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae 7P49H1] gi|144979724|gb|EDJ89383.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae 22.1-21] gi|144987358|gb|EDJ93888.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae 3655] gi|145268688|gb|EDK08681.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae PittAA] gi|145270287|gb|EDK10222.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae PittHH] gi|145272429|gb|EDK12336.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae PittII] gi|148716460|gb|ABQ98670.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae PittEE] gi|229811122|gb|EEP46839.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae 7P49H1] gi|229812869|gb|EEP48557.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae 6P18H1] gi|301169827|emb|CBW29431.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Haemophilus influenzae 10810] gi|309751266|gb|ADO81250.1| Phospholipid ABC transporter, permease component [Haemophilus influenzae R2866] Length = 261 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 70/207 (33%), Positives = 120/207 (57%), Gaps = 1/207 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++QM+ +GV + +++L G V+ QG L F AE L+++ LRE+G ++ Sbjct: 44 LVKQMHVLGVQSLLIILLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+P+L+IL Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPILSILFI 163 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G S+V + + F+S ++ + + +I G IKA F A A+ +A+ G+ Sbjct: 164 AIGIWGGSLVGVDWKGVDSGSFWSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYD 223 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIID 361 S + + T VV + +V+ +D Sbjct: 224 CMPTSEGISQATTRTVVHASLVVLGLD 250 >gi|303327746|ref|ZP_07358186.1| thioredoxin family protein [Desulfovibrio sp. 3_1_syn3] gi|302862107|gb|EFL85041.1| thioredoxin family protein [Desulfovibrio sp. 3_1_syn3] Length = 267 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 117/216 (54%), Gaps = 5/216 (2%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 ++Q+Y +G + V++LI G V+ QG + L QFG+ +S+ +RE+G +LT Sbjct: 50 LQQIYVIGYKSLFVILLIGIFCGMVLGLQGYYTLIQFGSVGMLGSAVSLTLIRELGPVLT 109 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A+M+ GR+GS++ AEIG M+I ++IDA+ M ++ + L+SPR+ A +IS PLLT + + Sbjct: 110 AIMLTGRAGSSMAAEIGVMRITDQIDALDVMDINSLGYLVSPRLVAALISFPLLTAIFDV 169 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV- 335 I+G + I +F R S+ T+ +I G +KA + V +G+ Sbjct: 170 IGILGGYLTGVLMLGINEGAYFYRIASSVTMTDISGGFVKALVFGLLVTTVCCHQGYYTH 229 Query: 336 ----GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 V ++G T+ VV S +++ D + F Sbjct: 230 RRRDSVGPEAVGNATTSAVVISCVLILAADYVLTSF 265 >gi|251793143|ref|YP_003007871.1| ABC transporter permease [Aggregatibacter aphrophilus NJ8700] gi|247534538|gb|ACS97784.1| conserved ABC-type transport system protein, permease component [Aggregatibacter aphrophilus NJ8700] Length = 261 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 69/206 (33%), Positives = 118/206 (57%), Gaps = 1/206 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I+Q++ +GV + +++L G V+ QG L F AE L+++ LRE+G ++T Sbjct: 45 IKQLHVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVT 104 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA II++P+L+I+ Sbjct: 105 ALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGIIAMPILSIIFIA 164 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAV 335 I G S+V + + F+S ++ T +I G IK+ F A A+ +A+ G+ Sbjct: 165 IGIWGGSLVGVDWKGVDAGSFWSVMQNSVTWGHDILNGSIKSLFFAIAVVWIALFNGYDC 224 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361 S + K T VV + +V+ +D Sbjct: 225 IPTSEGISKATTRTVVHASLVVLGLD 250 >gi|312881882|ref|ZP_07741649.1| hypothetical protein VIBC2010_12694 [Vibrio caribbenthicus ATCC BAA-2122] gi|309370461|gb|EFP97946.1| hypothetical protein VIBC2010_12694 [Vibrio caribbenthicus ATCC BAA-2122] Length = 263 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 71/216 (32%), Positives = 118/216 (54%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LIRQ+Y VGV + +++L G V++ QG L FGAE ++++ LRE+G ++ Sbjct: 47 LIRQLYSVGVQSLLIIVLSGLFIGMVLSLQGYVILVDFGAEGALGQMVALSLLRELGPVV 106 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D ++ +I+PR WA +IS+P+L ++ Sbjct: 107 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPMLAMIFM 166 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G +V + I F+S ++ L +I LIK+ A + VA+ G+ Sbjct: 167 AVGIWGGQLVGVDWKGIDNGSFWSAMQASVELGQDIGNSLIKSMVFAFTVTWVALFNGYD 226 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV S V+ +D + F Sbjct: 227 AVPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 262 >gi|326795053|ref|YP_004312873.1| hypothetical protein Marme_1781 [Marinomonas mediterranea MMB-1] gi|326545817|gb|ADZ91037.1| protein of unknown function DUF140 [Marinomonas mediterranea MMB-1] Length = 260 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 75/207 (36%), Positives = 122/207 (58%), Gaps = 1/207 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+ Q+Y VGV + +VI+ G V+A QG L++FG+E L+++ LRE+G ++ Sbjct: 43 LVNQVYSVGVLSLVIVIVSGCFIGMVLALQGYTILAKFGSEQAVGQLLALSLLRELGPVV 102 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ + MG+D +R +I+PR A +I +PLL ++ + Sbjct: 103 TALLFAGRAGSALTAEIGLMKATEQLSSYEMMGVDPLRRVIAPRFIAGMICMPLLCLIFS 162 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 + I+G +V + I F+S + ++F G+IK+ F ACAI +A+ +GF Sbjct: 163 ATGILGGMLVSVHWLGIYDGSFWSLMQQSVYFDIDVFNGIIKSIFFACAITWIAVYQGFE 222 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIID 361 S +GK T VV V+ +D Sbjct: 223 CDPTSEGIGKATTRTVVLGSLAVLFLD 249 >gi|229588433|ref|YP_002870552.1| putative ABC transporter membrane protein [Pseudomonas fluorescens SBW25] gi|229360299|emb|CAY47156.1| putative ABC transport system, membrane protein [Pseudomonas fluorescens SBW25] Length = 265 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 124/215 (57%), Gaps = 1/215 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 ++Q++ VGV + ++++ G V+A QG LS +G+E ++++ LRE+G ++T Sbjct: 49 VKQLHAVGVMSLVIIVVSGVFIGMVLALQGFNILSSYGSEQAVGQMVALTLLRELGPVVT 108 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA ISLPLLTI+ + Sbjct: 109 ALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLTIIFSV 168 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I G S V + + +++ ++ T ++ G+IK+ A + +A+ +G+ Sbjct: 169 VGIWGGSWVAVDWLGVYDGSYWANMQNSVTFTGDVLNGIIKSIVFAFVVTWIAVFQGYDC 228 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 229 EPTSEGISRATTKTVVYASLAVLGLDFILTALMFG 263 >gi|261342639|ref|ZP_05970497.1| toluene tolerance ABC efflux transporter, permease [Enterobacter cancerogenus ATCC 35316] gi|288315287|gb|EFC54225.1| toluene tolerance ABC efflux transporter, permease [Enterobacter cancerogenus ATCC 35316] Length = 260 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 76/218 (34%), Positives = 118/218 (54%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y VGV + ++I+ G V+ QG L+ + AE L+++ LRE+G ++ Sbjct: 44 LVRQLYNVGVLSMVIIIVSGLFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ AGR+GSA+ AEIG M+ E++ ++ M +D +R +ISPR WA +ISLPLLTIL Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTILFV 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 I G S+ V WK D F F+S L ++ LIK+ A + +A+ G Sbjct: 164 AVGIWGGSLVGVHWKGIDAGF--FWSAMQDAIDLRMDLINCLIKSLVFAVTVTWIALFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV S V+ +D + F Sbjct: 222 YDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|260772164|ref|ZP_05881081.1| uncharacterized ABC transporter permease component YrbE [Vibrio metschnikovii CIP 69.14] gi|260613031|gb|EEX38233.1| uncharacterized ABC transporter permease component YrbE [Vibrio metschnikovii CIP 69.14] Length = 263 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 70/216 (32%), Positives = 118/216 (54%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y VGV + ++I+ G V++ QG L FGAE ++++ LRE+G ++ Sbjct: 47 LMKQLYSVGVQSLAIIIVSGLFIGMVLSLQGYVILVDFGAETSLGQMVALSLLRELGPVV 106 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E+I ++ M +D ++ +I+PR+WA +IS+PLL ++ Sbjct: 107 TALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLKRIIAPRLWAGLISMPLLAMIFM 166 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G +V + I F+S S+ L +I +IK A + +A+ G+ Sbjct: 167 AVGIWGGHLVGVDWKGIDQGSFWSVMQSSVELGRDIGNSVIKCVVFAITVTWIALFNGYD 226 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV S V+ +D + F Sbjct: 227 AIPTSEGISRATTRTVVHSSLAVLALDFVLTALMFG 262 >gi|330807561|ref|YP_004352023.1| putative ABC transporter, membrane protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375669|gb|AEA67019.1| putative ABC transporter, membrane protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 265 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 124/216 (57%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q++ VGV + ++++ G V+A QG LS +G+E ++++ LRE+G ++ Sbjct: 48 LVKQLHSVGVMSLVIIVVSGIFIGMVLALQGFNILSSYGSEQAVGQMVALTLLRELGPVV 107 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +I+PR+WA ISLP+L I+ + Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIIAPRLWAGFISLPVLAIIFS 167 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFA 334 I G S V + + ++S ++ L ++ G+IK+ A + +A+ +G+ Sbjct: 168 VVGIWGGSWVAVDWLGVYEGSYWSNMQNSVDFLDDVLNGVIKSAVFAFVVTWIAVFQGYD 227 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 228 CEPTSEGISRATTKTVVYASLAVLGLDFILTALMFG 263 >gi|302036233|ref|YP_003796555.1| putative toluene efflux ABC transporter ATP-binding protein [Candidatus Nitrospira defluvii] gi|300604297|emb|CBK40629.1| ABC transporter, membrane component, putative ATP-dependent toluene efflux transporter [Candidatus Nitrospira defluvii] Length = 255 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 64/206 (31%), Positives = 116/206 (56%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +++Q+ ++G VV+L + TG V+A QG + L +FG+E +++ +RE+G +L Sbjct: 42 IVKQLNFIGYKSTFVVVLTAVFTGMVLALQGHYTLRKFGSEAVLGSAVALSIIRELGPVL 101 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A+M+ R+GSA+ AEIG M+I E+IDA+ TM ++ ++ LI P++ A +I++PLL L + Sbjct: 102 AALMVTARAGSAMTAEIGIMRITEQIDALDTMAINPLQYLIGPKLVASLIAVPLLVALFD 161 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I G +V + + ++S S +++ G++K+ I V +GF Sbjct: 162 VVGIYGGYVVGVQLLNGNEGAYWSSIESAVEWKDVYGGILKSISFGLLISWVCCYKGFHT 221 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361 + LG T VV S ++++ D Sbjct: 222 KHSAEGLGTATTEAVVLSAVLILVWD 247 >gi|293391911|ref|ZP_06636245.1| conserved ABC-type transport system protein, permease component [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952445|gb|EFE02564.1| conserved ABC-type transport system protein, permease component [Aggregatibacter actinomycetemcomitans D7S-1] Length = 261 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 70/216 (32%), Positives = 121/216 (56%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q++ +GV + +++L G V+ QG L F AE L+++ LRE+G ++ Sbjct: 44 LIKQLHVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+ R WA +I++P+L+I+ Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIASRFWAGVIAMPILSIIFI 163 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G S+V + + F+S S+ T + +I G IK+ F A A+ +A+ G+ Sbjct: 164 AIGIWGGSLVGVDWKGVDSGSFWSVMQSSVTWSHDILNGFIKSLFFAIAVVWIALFNGYD 223 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + K T VV + +V+ +D + F Sbjct: 224 CIPTSEGISKATTRTVVHASLVVLGLDFVLTTIMFG 259 >gi|212633565|ref|YP_002310090.1| hypothetical protein swp_0685 [Shewanella piezotolerans WP3] gi|212555049|gb|ACJ27503.1| Conserved hypothetical protein [Shewanella piezotolerans WP3] Length = 235 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 72/228 (31%), Positives = 121/228 (53%), Gaps = 1/228 (0%) Query: 144 ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203 A + K L L +Q+Y +GV + ++++ G V+A QG L FG E ++ Sbjct: 7 AHRPRLKKGLPLLTKQLYVIGVQSMVIILVSGLFIGMVLALQGYNILVGFGTEESLGPMV 66 Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263 ++ LRE+G ++TA++ AGR+GSA+ AE+ MK E++ ++ M +D +R +I+PR WA Sbjct: 67 ALSLLRELGPVVTALLFAGRAGSALTAELALMKSTEQLSSLEMMAVDPLRQIIAPRFWAG 126 Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMAC 322 +ISLPLL ++ I G IV ++ I F+S S+ +I +IK+ A Sbjct: 127 VISLPLLALMFTAIGIYGGHIVGVEWKGIDSGAFWSILQSSVEWRQDIVNCMIKSLLFAV 186 Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +A+ G+ V + + + T VVQS V+ +D L F Sbjct: 187 VVTWIALYRGYHVIPNPEGISRATTQTVVQSSLAVLALDFLLTAMMFG 234 >gi|54310335|ref|YP_131355.1| hypothetical protein PBPRA3247 [Photobacterium profundum SS9] gi|46914776|emb|CAG21553.1| conserved hypothetical protein [Photobacterium profundum SS9] Length = 260 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 69/216 (31%), Positives = 120/216 (55%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y VGV + ++++ G V++ QG L FGAE ++++ LRE+G ++ Sbjct: 44 LMKQLYSVGVLSIAIIMVSGLFIGMVLSLQGYIVLVDFGAETSLGQMVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+PLL+++ + Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRQVIAPRFWAGVISMPLLSMMFS 163 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G +V + I + F+S ++ L +I LIK+ A I +A+ G+ Sbjct: 164 AVGIWGGQLVGVDWKGIDYGSFWSVMQASVELGEDIGNSLIKSVVFAITITWIAVFNGYD 223 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + T VV + V+ +D + F Sbjct: 224 AVPTSEGISLATTRTVVNASLAVLGLDFVLTALMFG 259 >gi|94987489|ref|YP_595422.1| ABC-type transport system involved in resistance to organic solvents, permease component [Lawsonia intracellularis PHE/MN1-00] gi|94731738|emb|CAJ55101.1| ABC-type transport system involved in resistance to organic solvents, permease component [Lawsonia intracellularis PHE/MN1-00] Length = 386 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 69/211 (32%), Positives = 113/211 (53%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 R M GV +P+V LIS + G ++A G QL FGAEI+ L++I R +G ++T Sbjct: 171 RCMQQAGVEALPIVSLISLLVGLILAFVGVIQLRMFGAEIYVSSLVAIGMTRIMGAVMTG 230 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 V+++GR+G++ A IG+M +NEEIDA+ T G+ L+ PR+ AL PLL + ++F Sbjct: 231 VILSGRTGASYAATIGTMNVNEEIDALMTFGIRPSDFLVMPRLIALTTMTPLLVVYSDFM 290 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 ++G IV I + + L N++ G+I I I +G G Sbjct: 291 GMLGGFIVGVGVLGIEPLEYINFTQKGFALKNLWVGIIHGIAFGIIIAITGCYQGLNSGK 350 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 +++++G T+ VV SI ++I + I + Sbjct: 351 NASAVGLATTSAVVYSIVGIVIATACLTIIF 381 >gi|209694101|ref|YP_002262029.1| toluene tolerance protein Ttg2B [Aliivibrio salmonicida LFI1238] gi|208008052|emb|CAQ78191.1| toluene tolerance protein Ttg2B [Aliivibrio salmonicida LFI1238] Length = 264 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 76/232 (32%), Positives = 123/232 (53%), Gaps = 2/232 (0%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G A + F L L++Q+Y VGV + ++++ G VI+ QG L +GAE Sbjct: 33 GAIIAKPQPVRMFPL-LLQQLYSVGVLSLVIIVVSGLFIGMVISLQGYVILVDYGAETSL 91 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 L+S+ LRE+G ++TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR Sbjct: 92 GQLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKTTEQLSSMEMMAIDPLRRIIAPR 151 Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAP 318 +WA +IS+PLL ++ I G IV ++ I F+S ++ + +I LIK Sbjct: 152 LWAGVISMPLLAMIFMAVGIWGGQIVGVEWKGIDHGSFWSVMQASVDVRHDIVNSLIKCV 211 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 A + +A+ G+ S + T VV S V+ ID + F Sbjct: 212 VFAFVVTWIALFNGYDATPTSEGISLATTRTVVHSSLAVLGIDFVLTALMFG 263 >gi|238023142|ref|ZP_04603568.1| hypothetical protein GCWU000324_03068 [Kingella oralis ATCC 51147] gi|237865525|gb|EEP66665.1| hypothetical protein GCWU000324_03068 [Kingella oralis ATCC 51147] Length = 257 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 67/215 (31%), Positives = 119/215 (55%), Gaps = 3/215 (1%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215 IRQMY+ GV V ++ + G VI QG QL++F A++ + + L LRE+G +L Sbjct: 43 IRQMYFSGVLSVLIIAVSGLFVGMVIGLQGYTQLAKFKSADVLGFMVAASL-LRELGPVL 101 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ A +G A+ +EIG MK E+++A+ M ++ V +++PR WA ++S+PLL + N Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTEQLEAMDVMAVNPVARVVAPRFWAGVVSMPLLACIFN 161 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 + I G +V ++ + VF+S + + ++F GL K+ A+ ++A+ +GF Sbjct: 162 VAGIYGGYLVGVQWLGLDTGVFWSNMQNNIDWSYDVFNGLTKSLIFGSAVALIAVYQGFH 221 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + + + T VV S V+ +D + F F Sbjct: 222 CTPTAEGILRASTRTVVSSALTVLALDFILTAFMF 256 >gi|167031981|ref|YP_001667212.1| hypothetical protein PputGB1_0966 [Pseudomonas putida GB-1] gi|166858469|gb|ABY96876.1| protein of unknown function DUF140 [Pseudomonas putida GB-1] Length = 265 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 64/216 (29%), Positives = 123/216 (56%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L +Q+Y VGV + +V++ G V+A QG L+++G+E ++++ LRE+G ++ Sbjct: 48 LTKQLYSVGVLSLAIVVVSGVFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVV 107 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA ISLPLL ++ + Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFS 167 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G S V + + F++ ++ + ++ GL+K+ A +A+ +G+ Sbjct: 168 VVGIWGGSWVAVDWLGVYEGSFWANMQNSVSFTDDVLNGLVKSLVFAFVTTWIAVFQGYD 227 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 228 CEPTSEGISRATTKTVVYASLAVLGLDFILTALMFG 263 >gi|157963422|ref|YP_001503456.1| hypothetical protein Spea_3608 [Shewanella pealeana ATCC 700345] gi|157848422|gb|ABV88921.1| protein of unknown function DUF140 [Shewanella pealeana ATCC 700345] Length = 261 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 69/216 (31%), Positives = 119/216 (55%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y +GV + ++I+ G V+A QG L FG E ++++ LRE+G ++ Sbjct: 45 LLKQLYVIGVQSMVIIIVSGLFIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVV 104 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AE+G MK E++ ++ M +D +R +I+PR WA +ISLPLL ++ Sbjct: 105 TALLFAGRAGSALTAELGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVISLPLLALMFT 164 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334 I G +V ++ I F+S ++ +I +IK+ A + +A+ G+ Sbjct: 165 AVGIYGGHLVGVEWKGIDSGSFWSILQASVEWREDIVNCIIKSLLFAVVVTWIALYRGYH 224 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 V + + + T VVQS V+ +D L F Sbjct: 225 VIPNPEGISRATTQTVVQSSLAVLALDFLLTAVMFG 260 >gi|296104907|ref|YP_003615053.1| putative ABC transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059366|gb|ADF64104.1| putative ABC transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 260 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 76/218 (34%), Positives = 118/218 (54%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y VGV + ++I+ G V+ QG L+ + AE L+++ LRE+G ++ Sbjct: 44 LVRQLYNVGVLSMLIIIVSGLFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ AGR+GSA+ AEIG M+ E++ ++ M +D +R +ISPR WA +ISLPLLTIL Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTILFV 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 I G S+ V WK D F F+S L ++ LIK+ A + +A+ G Sbjct: 164 AVGIWGGSLVGVHWKGIDAGF--FWSAMQDAIDLRMDLVNCLIKSVVFAITVTWIALFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV S V+ +D + F Sbjct: 222 YDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|148977765|ref|ZP_01814321.1| putative ABC superfamily transport protein [Vibrionales bacterium SWAT-3] gi|145962979|gb|EDK28249.1| putative ABC superfamily transport protein [Vibrionales bacterium SWAT-3] Length = 259 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 71/224 (31%), Positives = 122/224 (54%), Gaps = 2/224 (0%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 + K F L L++Q+Y VGV + ++++ G V++ QG L +GAE ++++ Sbjct: 36 RLKNFPL-LVKQLYSVGVQSLAIILVSGLFIGMVLSLQGYVVLIDYGAEGNLGQMVALSL 94 Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267 LRE+G ++TA++ AGR+GSA+ AEIG MK E+I ++ M +D ++ +I+PR+WA +IS+ Sbjct: 95 LRELGPVVTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLKRIIAPRLWAGLISM 154 Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGI 326 PLL ++ I G +V + I F+S S+ L +I +IK A + Sbjct: 155 PLLAMIFMAVGIWGGQLVGVDWKGIDHGSFWSAMQSSVELGRDIGNSMIKCMVFAITVTW 214 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +A+ G+ S + + T VV S V+ +D + F Sbjct: 215 IALFNGYDAVPTSEGISQATTRTVVHSSLAVLGLDFVLTALMFG 258 >gi|241758953|ref|ZP_04757065.1| ABC transport inner membrane subunit [Neisseria flavescens SK114] gi|241320774|gb|EER57007.1| ABC transport inner membrane subunit [Neisseria flavescens SK114] Length = 258 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 68/215 (31%), Positives = 120/215 (55%), Gaps = 3/215 (1%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215 IRQ+Y+ GV V +V + G V+ QG QL++F A+I + + L LRE+G +L Sbjct: 43 IRQVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLAKFKSADILGYMVAASL-LRELGPVL 101 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ A +G A+ +EIG MK E+++A+ M +D V +++PR WA + S+PLL + N Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVDPVARVVAPRFWAGVFSMPLLASIFN 161 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 + I GA +V ++ + +F+S+ + T ++ GLIK+ A+ ++A+ +GF Sbjct: 162 VAGIYGAYLVGVEWLGLDGGIFWSQMQNNITFHYDVLNGLIKSAAFGVAVTLIAVHQGFH 221 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 S + + T VV S ++ +D + + F Sbjct: 222 CVPTSEGILRASTRTVVSSALTILAVDFMLTAWMF 256 >gi|4336799|gb|AAD17958.1| toluene tolerance protein Ttg2B [Pseudomonas putida] Length = 265 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 64/216 (29%), Positives = 123/216 (56%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L +Q+Y VGV + ++++ G V+A QG L+++G+E ++++ LRE+G ++ Sbjct: 48 LTKQLYSVGVLSLAIIVVSGVFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVV 107 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA ISLPLL ++ + Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFS 167 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G S V + + F++ ++ + ++ GLIK+ A +A+ +G+ Sbjct: 168 VVGIWGGSWVAVDWLGVYEGSFWANMQNSVSFTDDVLNGLIKSLVFAFVTTWIAVFQGYD 227 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 228 CEPTSEGISRATTKTVVYASLAVLGLDFILTALMFG 263 >gi|260914439|ref|ZP_05920908.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Pasteurella dagmatis ATCC 43325] gi|260631540|gb|EEX49722.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Pasteurella dagmatis ATCC 43325] Length = 260 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 118/216 (54%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q++ +GV + +++L G V+ QG L F AE L+++ LRE+G ++ Sbjct: 43 LVKQLHVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVV 102 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+P+L ++ Sbjct: 103 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPILAVIFT 162 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G S+V + + F+S + T ++ G IK+ A A+ +A+ G+ Sbjct: 163 AIGIWGGSLVGVDWKGVDSGSFWSVMQNAVTWEKDLLNGFIKSLCFAIAVVWIALFNGYD 222 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + K T VV + +V+ +D + F Sbjct: 223 CLPTSEGISKATTRTVVHASLVVLGLDFVLTALMFG 258 >gi|329113573|ref|ZP_08242353.1| Putative ABC transporter permease protein [Acetobacter pomorum DM001] gi|326697095|gb|EGE48756.1| Putative ABC transporter permease protein [Acetobacter pomorum DM001] Length = 385 Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 76/230 (33%), Positives = 121/230 (52%), Gaps = 6/230 (2%) Query: 145 SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204 S+ + K LL + + G + +V +++F+ GA++A G +L +F AEI+ DL+ Sbjct: 161 SAMRMKDLLLDI----WNAGPDALLIVGIVNFLVGAILAFVGLVELRKFAAEIYVTDLVG 216 Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264 I REI ++TA+++AGR+G A A I +M NEEIDA++ G+ ++ P I +L Sbjct: 217 IACAREISAIMTAIIMAGRTGGAYAARISTMLGNEEIDALQVFGIPISSYILLPSIVSLA 276 Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDI-PFAVFFSRFHSTATLANIFTGLIKAPFMACA 323 + +PLL + AI G V D+ P + S F IF G IK+ F A Sbjct: 277 LMMPLLYLYGTIVAIFGGFAVSMSMMDVSPIGYWISTFDGVELKEFIF-GFIKSFFFASF 335 Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 I + A + G G + +G T VV I +I +D++FA+ A+GI Sbjct: 336 IALAACRVGLKAGRSAADVGIAATRAVVIGIVGIIAMDAIFAVIANALGI 385 >gi|148546241|ref|YP_001266343.1| hypothetical protein Pput_0998 [Pseudomonas putida F1] gi|148510299|gb|ABQ77159.1| protein of unknown function DUF140 [Pseudomonas putida F1] Length = 265 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 64/216 (29%), Positives = 123/216 (56%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L +Q+Y VGV + +V++ G V+A QG L+++G+E ++++ LRE+G ++ Sbjct: 48 LTKQLYSVGVLSLAIVVVSGVFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVV 107 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA ISLPLL ++ + Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFS 167 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G S V + + F++ ++ + ++ GL+K+ A +A+ +G+ Sbjct: 168 VVGIWGGSWVAVDWLGVYEGSFWANMQNSVSFTDDVLNGLVKSLVFAFVSTWIAVFQGYD 227 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 228 CEPTSEGISRATTKTVVYASLAVLGLDFILTALMFG 263 >gi|18149137|dbj|BAB83590.1| toluene resistance protein Trg1 [Pseudomonas putida] gi|269200089|gb|ACZ28672.1| Ttg2B [Pseudomonas putida] Length = 265 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 64/216 (29%), Positives = 123/216 (56%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L +Q+Y VGV + +V++ G V+A QG L+++G+E ++++ LRE+G ++ Sbjct: 48 LTKQLYSVGVLSLAIVVVSGVFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVV 107 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA ISLPLL ++ + Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFS 167 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G S V + + F++ ++ + ++ GL+K+ A +A+ +G+ Sbjct: 168 VVGIWGGSWVAVDWLGVYEGSFWANMQNSVSFTDDVLNGLVKSVVFAFVSTWIAVFQGYD 227 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 228 CEPTSEGISRATTKTVVYASLAVLGLDFILTALMFG 263 >gi|269960373|ref|ZP_06174747.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269834984|gb|EEZ89069.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 263 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 72/232 (31%), Positives = 122/232 (52%), Gaps = 2/232 (0%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G K F L LI+Q+Y VGV + ++++ G V++ QG L +GAE Sbjct: 32 GALVTRPQPIKNFPL-LIKQLYSVGVQSLAIIVVSGLFIGMVLSLQGYVVLVDYGAEGSL 90 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK E++ ++ M +D ++ +I+PR Sbjct: 91 GQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLKRVIAPR 150 Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAP 318 WA +IS+PLL ++ I GA IV + + F++ S+ L +I +IK Sbjct: 151 FWAGVISMPLLAMIFMAVGIWGAQIVGVDWKGVDHGSFWAAMQSSVELGQDIGNSMIKCI 210 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 A + +A+ G+ S + + T VV S V+ +D + F Sbjct: 211 VFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 262 >gi|258543490|ref|YP_003188923.1| ABC transporter permease [Acetobacter pasteurianus IFO 3283-01] gi|256634568|dbj|BAI00544.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-01] gi|256637626|dbj|BAI03595.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-03] gi|256640678|dbj|BAI06640.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-07] gi|256643735|dbj|BAI09690.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-22] gi|256646790|dbj|BAI12738.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-26] gi|256649843|dbj|BAI15784.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-32] gi|256652831|dbj|BAI18765.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655887|dbj|BAI21814.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-12] Length = 385 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 76/230 (33%), Positives = 121/230 (52%), Gaps = 6/230 (2%) Query: 145 SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204 S+ + K LL + + G + +V +++F+ GA++A G +L +F AEI+ DL+ Sbjct: 161 SAMRMKDLLLDI----WNAGPDALLIVGIVNFLVGAILAFVGLVELRKFAAEIYVTDLVG 216 Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264 I REI ++TA+++AGR+G A A I +M NEEIDA++ G+ ++ P I +L Sbjct: 217 IACAREISAIMTAIIMAGRTGGAYAARISTMLGNEEIDALQVFGIPISSYILLPSIVSLA 276 Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDI-PFAVFFSRFHSTATLANIFTGLIKAPFMACA 323 + +PLL + AI G V D+ P + S F IF G IK+ F A Sbjct: 277 LMMPLLYLYGTIVAIFGGFAVSMSMMDVSPIGYWISTFDGVELKEFIF-GFIKSFFFASF 335 Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 I + A + G G + +G T VV I +I +D++FA+ A+GI Sbjct: 336 IALAACRVGLKAGRSAADVGVAATRAVVIGIVGIIAMDAIFAVIANALGI 385 >gi|261379496|ref|ZP_05984069.1| toluene tolerance ABC efflux transporter, permease [Neisseria subflava NJ9703] gi|319638901|ref|ZP_07993659.1| ABC transport inner membrane subunit [Neisseria mucosa C102] gi|284797959|gb|EFC53306.1| toluene tolerance ABC efflux transporter, permease [Neisseria subflava NJ9703] gi|317399805|gb|EFV80468.1| ABC transport inner membrane subunit [Neisseria mucosa C102] Length = 258 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 68/215 (31%), Positives = 120/215 (55%), Gaps = 3/215 (1%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215 IRQ+Y+ GV V +V + G V+ QG QL++F A+I + + L LRE+G +L Sbjct: 43 IRQIYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLAKFKSADILGYMVAASL-LRELGPVL 101 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ A +G A+ +EIG MK E+++A+ M +D V +++PR WA + S+PLL + N Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVDPVARVVAPRFWAGVFSMPLLASIFN 161 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 + I GA +V ++ + +F+S+ + T ++ GLIK+ A+ ++A+ +GF Sbjct: 162 VAGIYGAYLVGVEWLGLDGGIFWSQMQNNITFHYDVLNGLIKSAAFGVAVTLIAVHQGFH 221 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 S + + T VV S ++ +D + + F Sbjct: 222 CVPTSEGILRASTRTVVSSALTILAVDFILTAWMF 256 >gi|322420104|ref|YP_004199327.1| hypothetical protein GM18_2600 [Geobacter sp. M18] gi|320126491|gb|ADW14051.1| protein of unknown function DUF140 [Geobacter sp. M18] Length = 258 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 65/209 (31%), Positives = 114/209 (54%), Gaps = 2/209 (0%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 S++ QM +G +PV +++F G V+A Q +L ++G + ++ +RE+G + Sbjct: 42 SILAQMAIIGWDTLPVASVMAFFVGMVLALQTGVELQKYGGQNIIGAIVGHSMVRELGPV 101 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +T+ ++AGR GSA+ AE+G M + EEIDA++T+ +D VR L PR A II +P L I A Sbjct: 102 MTSFLVAGRCGSAMAAELGVMTVYEEIDALKTLDIDPVRYLAMPRFIACIICVPALVIYA 161 Query: 275 NFSAIIGASIV--IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 + I G +++ + + +A ++ + + I GL K+ I +V+ G Sbjct: 162 DLIGITGGALISNLHPQIFVSYATYYDSLTAALKMKEIGIGLTKSMVFGAIIALVSCYVG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIID 361 FA + +G+ T VV S +++I D Sbjct: 222 FATSGGARGIGQSTTRSVVLSFMLILIAD 250 >gi|295097681|emb|CBK86771.1| conserved hypothetical integral membrane protein [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 260 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 75/218 (34%), Positives = 118/218 (54%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y VGV + ++I+ G V+ QG L+ + AE L+++ LRE+G ++ Sbjct: 44 LVRQLYNVGVLSMLIIIVSGLFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ AGR+GSA+ AEIG M+ E++ ++ M +D +R +ISPR WA +ISLPLLTIL Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTILFV 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 I G ++ V WK D F F+S L ++ LIK+ A + +A+ G Sbjct: 164 AVGIWGGALVGVNWKGIDAGF--FWSAMQDAIDLRMDLVNCLIKSVVFAVTVTWIALFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV S V+ +D + F Sbjct: 222 YDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|15602040|ref|NP_245112.1| hypothetical protein PM0175 [Pasteurella multocida subsp. multocida str. Pm70] gi|12720395|gb|AAK02259.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 261 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 118/216 (54%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q++ +GV + +++L G V+ QG L F AE L+++ LRE+G ++ Sbjct: 43 LIKQLHVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVV 102 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +I++P+L I+ Sbjct: 103 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPILAIIFT 162 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G S+V + + F+S + T ++ G IK+ A A+ +A+ G+ Sbjct: 163 AIGIWGGSLVGVDWKGVDAGSFWSVMQNAVTWEKDLLNGFIKSLCFAIAVVWIALFNGYD 222 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + K T VV + +V+ +D + F Sbjct: 223 CIPTSEGISKATTRTVVHASLVVLGLDFVLTALMFG 258 >gi|313497328|gb|ADR58694.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1] Length = 265 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 64/216 (29%), Positives = 123/216 (56%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L +Q+Y VGV + +V++ G V+A QG L+++G+E ++++ LRE+G ++ Sbjct: 48 LTKQLYSVGVLSLAIVVVSGVFIGMVLALQGYSILAKYGSEQAVGQMVALTLLRELGPVV 107 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA ISLPLL ++ + Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFS 167 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G S V + + F++ ++ + ++ GL+K+ A +A+ +G+ Sbjct: 168 VVGIWGGSWVAVDWLGVYEGSFWANMQNSVSFTDDVLNGLVKSLVFAFVSTWIAVFQGYD 227 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 228 CEPTSEGISRATTKTVVYASLAVLGLDFILTALMFG 263 >gi|26987695|ref|NP_743120.1| hypothetical protein PP_0959 [Pseudomonas putida KT2440] gi|24982381|gb|AAN66584.1|AE016286_8 toluene tolerance ABC efflux transporter, permease [Pseudomonas putida KT2440] Length = 266 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 64/216 (29%), Positives = 123/216 (56%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L +Q+Y VGV + +V++ G V+A QG L+++G+E ++++ LRE+G ++ Sbjct: 49 LTKQLYSVGVLSLAIVVVSGVFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVV 108 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA ISLPLL ++ + Sbjct: 109 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFS 168 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G S V + + F++ ++ + ++ GL+K+ A +A+ +G+ Sbjct: 169 VVGIWGGSWVAVDWLGVYEGSFWANMQNSVSFTDDVLNGLVKSVVFAFVSTWIAVFQGYD 228 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 229 CEPTSEGISRATTKTVVYASLAVLGLDFILTALMFG 264 >gi|225077106|ref|ZP_03720305.1| hypothetical protein NEIFLAOT_02159 [Neisseria flavescens NRL30031/H210] gi|224951663|gb|EEG32872.1| hypothetical protein NEIFLAOT_02159 [Neisseria flavescens NRL30031/H210] Length = 258 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 67/215 (31%), Positives = 120/215 (55%), Gaps = 3/215 (1%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215 IRQ+Y+ GV V +V + G V+ QG QL++F A++ + + L LRE+G +L Sbjct: 43 IRQVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLAKFKSADVLGYMVAASL-LRELGPVL 101 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ A +G A+ +EIG MK E+++A+ M +D V +++PR WA + S+PLL + N Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVDPVARVVAPRFWAGVFSMPLLASIFN 161 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 + I GA +V ++ + +F+S+ + T ++ GLIK+ A+ ++A+ +GF Sbjct: 162 VAGIYGAYLVGVEWLGLDGGIFWSQMQNNITFHYDVLNGLIKSAAFGVAVTLIAVHQGFH 221 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 S + + T VV S ++ +D + + F Sbjct: 222 CVSTSEGILRASTRTVVSSSLTILAVDFMLTAWMF 256 >gi|145297399|ref|YP_001140240.1| ABC-type transporter, permease subunit [Aeromonas salmonicida subsp. salmonicida A449] gi|142850171|gb|ABO88492.1| ABC-type transporter, permease subunit [Aeromonas salmonicida subsp. salmonicida A449] Length = 259 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 67/207 (32%), Positives = 113/207 (54%), Gaps = 1/207 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y VGV V ++++ G V++ QG L FGAE L+S+ LRE+G ++ Sbjct: 44 LLQQLYVVGVQSVAIILVSGLFIGMVLSLQGYNVLKDFGAEQSLGPLVSLSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 T ++ AGR+GSA+ AEIG MK E++ ++ M +D +R +++PR WA +IS+PLL + + Sbjct: 104 TGLLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLAFMFS 163 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G +V + F+S ++ +I G IK+ A + +A+ G+ Sbjct: 164 LIGIFGGKLVGVDLLGVDEGSFWSAMQASVDWQDDIMQGAIKSLIFALVVTWIALFNGYD 223 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIID 361 S + + T VV S V+ +D Sbjct: 224 AKPTSAGISQATTRTVVHSSLAVLGLD 250 >gi|254468843|ref|ZP_05082249.1| ABC-type transporter, permease component involved in toluene tolerance [beta proteobacterium KB13] gi|207087653|gb|EDZ64936.1| ABC-type transporter, permease component involved in toluene tolerance [beta proteobacterium KB13] Length = 259 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 69/228 (30%), Positives = 125/228 (54%), Gaps = 2/228 (0%) Query: 145 SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204 SS FK F L+ IR++Y+ GV + ++++ +F G V+ QG + L ++G+ L++ Sbjct: 33 SSDSFKRFNLT-IREIYFTGVLSLVIIVVSAFFVGMVLGLQGYYTLQKYGSSEAIGVLVA 91 Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264 + +RE+G ++TA++ AGR+G+AI AEIG MK E++ A+ M + + +++PR WA I Sbjct: 92 LALVRELGPVVTALLFAGRAGTAITAEIGLMKATEQLSAMEMMAVSPIARIVAPRFWAGI 151 Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACA 323 I++PLL + + I+G +V + F+S+ + +I G IK+ A Sbjct: 152 ITMPLLASIFSMVGILGGYVVAVPMIGVDEGAFWSQMQANVDFNYDIVNGFIKSVVFGIA 211 Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 I+A+ EG+ + + + T VV S V+ +D + F + Sbjct: 212 CTIIALFEGYDAPPTAEGVSRATTRTVVTSSLAVLGLDFVLTSFMLTV 259 >gi|313896753|ref|ZP_07830301.1| putative membrane protein [Selenomonas sp. oral taxon 137 str. F0430] gi|320530066|ref|ZP_08031136.1| hypothetical protein HMPREF9555_01216 [Selenomonas artemidis F0399] gi|312974670|gb|EFR40137.1| putative membrane protein [Selenomonas sp. oral taxon 137 str. F0430] gi|320137499|gb|EFW29411.1| hypothetical protein HMPREF9555_01216 [Selenomonas artemidis F0399] Length = 255 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 68/215 (31%), Positives = 113/215 (52%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 S++ QM ++G + +V L TG V+ Q A + ++GA+ +++I RE+G + Sbjct: 41 SIVYQMSHLGADSLLIVGLTLLFTGVVLTLQTAHEFIRYGAQSTIGAVIAISIGRELGPV 100 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 L V+ AGR G+AI AE+ +MK+ E+IDA+R M + V LI PR+ A + +P+LT+ Sbjct: 101 LVGVVCAGRVGAAITAEVSTMKVTEQIDALRVMAVSPVNYLIVPRMLACMCVVPILTVFG 160 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 + + G + Y I F AT+ ++ GLIKA F I ++ G A Sbjct: 161 DVIGVFGGYLTAVHYSGISAYTFTHSITQFATIYDLTGGLIKAIFFGNVIAVLGCHYGLA 220 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +GK VV SI ++ I++++ F F Sbjct: 221 APNGAEGVGKATMQTVVTSIIVIFILNAVLTFFLF 255 >gi|193214677|ref|YP_001995876.1| hypothetical protein Ctha_0964 [Chloroherpeton thalassium ATCC 35110] gi|193088154|gb|ACF13429.1| protein of unknown function DUF140 [Chloroherpeton thalassium ATCC 35110] Length = 248 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 69/214 (32%), Positives = 111/214 (51%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 ++ QM ++GV +P+V+L+S TGA+ A Q A+Q+ + S + + E+G +L Sbjct: 35 VLAQMSHIGVDSLPLVLLVSIFTGAIAAWQAAYQMKGLAPLSLVGGITSRVIIIELGPVL 94 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 T ++IAGR G++I AE+G+MK+ E+IDA+ M + R L PRI A I +P+L I AN Sbjct: 95 TGIIIAGRVGASIAAELGTMKVTEQIDALEIMAISPSRYLAMPRILATTIMMPVLVIFAN 154 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 AI+GA IV + I VFF + ++ L+K+ + GF Sbjct: 155 IIAIVGAFIVSNMFLGISKQVFFDSLKTFFYTGDVVGALVKSGIFGLMTSLAGCHIGFRT 214 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G V S ++++I D F F Sbjct: 215 DGGAEGVGISTIRSFVVSSAMILIADYFLWFFLF 248 >gi|70728304|ref|YP_258053.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas fluorescens Pf-5] gi|68342603|gb|AAY90209.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas fluorescens Pf-5] Length = 265 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 64/216 (29%), Positives = 125/216 (57%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q++ VGV + ++++ G V+A QG LS +G+E ++++ LRE+G ++ Sbjct: 48 LVKQLHSVGVMSLVIIVVSGIFIGMVLALQGFNILSSYGSEQAVGQMVALTLLRELGPVV 107 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +I+PR+WA ISLPLL ++ + Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIIAPRLWAGFISLPLLAMIFS 167 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G S V + + +++ ++ T + ++ G+IK+ A + +A+ +G+ Sbjct: 168 VVGIWGGSWVAVDWLGVYDGSYWANMQNSVTFSGDVLNGVIKSIVFAFVVTWIAVFQGYD 227 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 228 CEPTSEGISRATTKTVVYASLAVLGLDFILTALMFG 263 >gi|229527546|ref|ZP_04416938.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae 12129(1)] gi|229335178|gb|EEO00663.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae 12129(1)] Length = 263 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 117/216 (54%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y +GV + ++I+ G V++ QG L +GAEI ++++ LRE+G ++ Sbjct: 47 LVRQLYSIGVQSLAIIIVSGLFIGMVLSLQGYVILVDYGAEISLGQMVALSLLRELGPVV 106 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D ++ +I+PR WA +IS+PLL ++ Sbjct: 107 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFM 166 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G +V + I F+S ++ L +I IK A + +A+ G+ Sbjct: 167 AVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYD 226 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV S V+ +D + F Sbjct: 227 AIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 262 >gi|301060804|ref|ZP_07201619.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300445201|gb|EFK09151.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 258 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 116/209 (55%), Gaps = 4/209 (1%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 ++Q+ ++G + +++L +G ++ QG + LS+FG++ F ++ + ++E+G ++ Sbjct: 42 LKQIRFIGFQSLLLILLTGAFSGMILGFQGFYSLSRFGSDAFLGPMVGLALIKELGPVIA 101 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A+M+ GR+GSAI AEIG M+I+E+IDA+ MGL+ R L+ P + A +I LPLLT + + Sbjct: 102 ALMVTGRAGSAITAEIGIMRISEQIDALELMGLNPYRYLVVPNLLAAVICLPLLTAIFDV 161 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 I G ++ + + +F + ++ G+ K+ I V +GF G Sbjct: 162 VGIFGGYLIGGELLGVGAGTYFGEMAHYVEMKDVLEGIYKSFSFGVIIAWVCCFKGFYSG 221 Query: 337 VH----SNSLGKKVTTCVVQSISIVIIID 361 ++ S + K T VV S ++++ D Sbjct: 222 IYTGFGSEGVSKATTQAVVLSSVLILVWD 250 >gi|225024503|ref|ZP_03713695.1| hypothetical protein EIKCOROL_01378 [Eikenella corrodens ATCC 23834] gi|224942654|gb|EEG23863.1| hypothetical protein EIKCOROL_01378 [Eikenella corrodens ATCC 23834] Length = 258 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 74/256 (28%), Positives = 132/256 (51%), Gaps = 12/256 (4%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL-IRQMYYVGVSG 167 N +G K + F+ + L V++ +G L L IRQ+Y+ GV Sbjct: 2 NFFRTLGAKTLDFLQELGKTTLFLFAVLARSGTLLPR--------LQLGIRQIYFTGVLS 53 Query: 168 VPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++ + G V+ QG QL++F A+I + + L LRE+G +L ++ A +G Sbjct: 54 IVIIAVSGLFVGMVLGLQGYTQLAKFKSADILGYMVAASL-LRELGPVLAGILFASSAGG 112 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ +EIG MK E+++A++ M +D V ++ PR WA +IS+PLL + N + I GA ++ Sbjct: 113 AMTSEIGLMKTTEQLEAMKVMAVDPVARVVVPRFWAGVISMPLLASICNVAGIYGAYLIG 172 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 +Y + +F+S+ + + ++ GLIK+ AI ++A+ +GF + + Sbjct: 173 VRYLGLDGGIFWSQMQANIDVGYDVVNGLIKSVVFGVAISLIAVYQGFHCRSTPEGILRA 232 Query: 346 VTTCVVQSISIVIIID 361 T VV S V+ +D Sbjct: 233 STRTVVSSALTVLALD 248 >gi|308189078|ref|YP_003933209.1| ABC transport system, permease protein yrbE [Pantoea vagans C9-1] gi|308059588|gb|ADO11760.1| Putative ABC transport system, permease protein yrbE [Pantoea vagans C9-1] Length = 260 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 70/218 (32%), Positives = 119/218 (54%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q+Y VGV + ++++ G V+ QG L+ +GAE L+++ LRE+G ++ Sbjct: 44 LIKQLYSVGVLSLLIIVVSGLFIGMVLGLQGYLVLTTYGAETSLGMLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R ++SPR WA IS+PLLT++ Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVVSPRFWAGFISMPLLTMIFT 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 I G ++ V WK D F F+S + ++ +IK+ A + +A+ G Sbjct: 164 AVGIAGGALVGVSWKGIDPGF--FWSAMQNAVDFRTDVVNCIIKSAVFAVTVTWIALFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV + V+ +D + F Sbjct: 222 YDAIPTSEGISRATTRTVVHASLAVLGLDFVLTALMFG 259 >gi|301155764|emb|CBW15232.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Haemophilus parainfluenzae T3T1] Length = 261 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 70/218 (32%), Positives = 121/218 (55%), Gaps = 1/218 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y +GV + +++L G V+ QG L F AE L+++ LRE+G ++ Sbjct: 44 LVKQLYALGVQSLLIILLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +I++P+L IL Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPILAILFT 163 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G S+V + + F+S + + + +I G IK+ F A A+ +A+ G+ Sbjct: 164 AIGIWGGSLVGVDWKGVDAGSFWSVMQNAVSWSYDILNGFIKSVFFAIAVVWIALFNGYD 223 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 S + + T VV + +V+ +D + F G Sbjct: 224 CIPTSEGISQATTRTVVHASLVVLGLDFILTAIMFGAG 261 >gi|91225579|ref|ZP_01260653.1| putative ABC superfamily transport protein [Vibrio alginolyticus 12G01] gi|269967998|ref|ZP_06182036.1| conserved hypothetical protein [Vibrio alginolyticus 40B] gi|91189699|gb|EAS75973.1| putative ABC superfamily transport protein [Vibrio alginolyticus 12G01] gi|269827355|gb|EEZ81651.1| conserved hypothetical protein [Vibrio alginolyticus 40B] Length = 263 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 74/246 (30%), Positives = 128/246 (52%), Gaps = 11/246 (4%) Query: 136 ISNTGEFCASSYKFKGFLLS----------LIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 +S G F +++ G L S L++Q+Y VGV + ++++ G V++ Q Sbjct: 17 LSICGAFGRATFMLIGALFSKPQPIRSFPLLVKQLYSVGVQSLAIIVVSGLFIGMVLSLQ 76 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 G L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK E++ ++ Sbjct: 77 GYVVLVDYGAEGSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLE 136 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 M +D ++ +I+PR WA +IS+PLL ++ I GA +V + + F+S S+ Sbjct: 137 MMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGAQLVGVDWKGVDHGSFWSAMQSSV 196 Query: 306 TLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L +I +IK A + VA+ G+ S + + T VV S V+ +D + Sbjct: 197 ELGQDIGNSMIKCFAFAITVTWVALFNGYDAIPTSEGISRATTRTVVHSSLAVLGLDFVL 256 Query: 365 AIFYFA 370 F Sbjct: 257 TALMFG 262 >gi|255658873|ref|ZP_05404282.1| toluene tolerance ABC efflux transporter, permease [Mitsuokella multacida DSM 20544] gi|260848821|gb|EEX68828.1| toluene tolerance ABC efflux transporter, permease [Mitsuokella multacida DSM 20544] Length = 256 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 74/238 (31%), Positives = 127/238 (53%), Gaps = 1/238 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG ++ GE + + K L ++ QM ++GV + +V L TG VI+ Q A L Sbjct: 20 LGTIVLLYGE-TLRALRHKPRLRHILAQMSHLGVDSLMIVSLTLLFTGVVISLQTADVLI 78 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 +FGA+ +++I RE+G +L AV+ AGR GSAI AEI +MK+ E+IDA+R M + Sbjct: 79 RFGAQGTLGGIVTIAIGRELGPVLVAVVCAGRVGSAITAEIATMKVTEQIDALRVMAVSP 138 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A +I +P+LT+ + + G ++ Y + + + H A L ++ Sbjct: 139 VDYLLVPRMLACMIVVPILTVFGDVIGVFGGWLIAVFYKGLTTYSYMNSIHIFADLFDMT 198 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 G+IKA F I ++ G + +G+ T VV SI ++ +++++ + Sbjct: 199 GGVIKAIFFGNVIAVLGCYYGLHCPDGAEGVGRATTKTVVASIIVIFLLNAVLTFLLY 256 >gi|170723417|ref|YP_001751105.1| hypothetical protein PputW619_4256 [Pseudomonas putida W619] gi|169761420|gb|ACA74736.1| protein of unknown function DUF140 [Pseudomonas putida W619] Length = 265 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 64/216 (29%), Positives = 122/216 (56%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L +Q+Y VGV + +V + G V+A QG L+++G+E ++++ LRE+G ++ Sbjct: 48 LTKQLYSVGVLSLAIVAVSGVFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVV 107 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA ISLPLL ++ + Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFS 167 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G S V + + F++ ++ + ++ GL+K+ A +A+ +G+ Sbjct: 168 VVGIWGGSWVAVDWLGVYEGSFWANMQNSVSFTDDVLNGLVKSLVFAFVTTWIAVFQGYD 227 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 228 CEPTSEGISRATTKTVVYASLAVLGLDFILTALMFG 263 >gi|304396326|ref|ZP_07378207.1| protein of unknown function DUF140 [Pantoea sp. aB] gi|304355835|gb|EFM20201.1| protein of unknown function DUF140 [Pantoea sp. aB] Length = 260 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 70/218 (32%), Positives = 119/218 (54%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q+Y VGV + ++++ G V+ QG L+ +GAE L+++ LRE+G ++ Sbjct: 44 LIKQLYSVGVLSLLIIVVSGLFIGMVLGLQGYLVLNTYGAETSLGMLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R ++SPR WA IS+PLLT++ Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVVSPRFWAGFISMPLLTMIFT 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 I G ++ V WK D F F+S + ++ +IK+ A + +A+ G Sbjct: 164 AVGIAGGALVGVSWKGIDPGF--FWSAMQNAVDFRTDVVNCIIKSAVFAVTVTWIALFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV + V+ +D + F Sbjct: 222 YDAIPTSEGISRATTRTVVHASLAVLGLDFVLTALMFG 259 >gi|330721190|gb|EGG99301.1| Uncharacterized ABC transporter2C permease component YrbE [gamma proteobacterium IMCC2047] Length = 225 Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 67/213 (31%), Positives = 124/213 (58%), Gaps = 2/213 (0%) Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209 KG L L++Q+Y VGV +P++I+ G V++ QG L +G+E ++S+ +R Sbjct: 3 KGLPL-LLKQLYAVGVLSLPIIIVSGLFIGMVMSLQGYSILVDYGSEQAVGQMVSLSLVR 61 Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 E+G ++TA++ AGR+GS++ AEIG MK E+I ++ +G+D +R +++PR+ A I+LPL Sbjct: 62 ELGPVVTALLFAGRAGSSLTAEIGLMKATEQITSLEMLGVDPLRYVMAPRLLAGFIALPL 121 Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVA 328 LT++ N I G ++V + + F++ + ++ G++K+ A + +A Sbjct: 122 LTLIFNVVGIWGGALVAVDWLGVYDGSFWANMQAATDFRTDVVNGMVKSIAFAFVVTWIA 181 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + +G + S +G+ T VV S V+ +D Sbjct: 182 VFQGHDLTPTSEGIGRATTKTVVYSSLAVLGLD 214 >gi|149178242|ref|ZP_01856835.1| probable permease of ABC transporter [Planctomyces maris DSM 8797] gi|148842891|gb|EDL57261.1| probable permease of ABC transporter [Planctomyces maris DSM 8797] Length = 280 Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 66/218 (30%), Positives = 121/218 (55%), Gaps = 12/218 (5%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQG--AFQLSQFGAEIFSIDLMSILQLREIG 212 +L MY++G+ +PV+++ G V+A Q F+L +I ++ +S+++ E+G Sbjct: 51 NLWSCMYHIGIQSIPVILITGGFIGMVLAVQSYDQFKLMHLENQIGAVIAISLVE--ELG 108 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 +L A+M+AGR G+++ AE+G+M++ E+IDA+R +G D + L+ PR A + +PLLTI Sbjct: 109 PVLAAIMLAGRVGTSMSAELGTMRVTEQIDALRALGADPIHYLVVPRFLACCLLIPLLTI 168 Query: 273 LANFSAIIGASIVIWKYYDIPFAV-FFSRFHSTATLA---NIFTGLIKAPFMACAIGIVA 328 +A+ I+G W + V F +H + ++ G+ K+ F AI +++ Sbjct: 169 VADAVGILGG----WFFSTQILGVDSFYYWHYSEQFVYAYDVMGGIFKSFFFGAAISLIS 224 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 GF G + +GK T V S +++I+D L + Sbjct: 225 CHRGFHCGAGAEGVGKAATEAFVYSFIVIMILDFLLGV 262 >gi|237809666|ref|YP_002894106.1| hypothetical protein Tola_2931 [Tolumonas auensis DSM 9187] gi|237501927|gb|ACQ94520.1| protein of unknown function DUF140 [Tolumonas auensis DSM 9187] Length = 259 Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 70/207 (33%), Positives = 117/207 (56%), Gaps = 1/207 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q+Y VGV V ++++ G V+ QG L FGAE L+++ LRE+G ++ Sbjct: 44 LIQQLYVVGVESVLIILVSGLFIGMVLGFQGYRVLVDFGAEASLGPLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 +A++ AGR+GSA+ AEIG MK E++ ++ M +D +R ++SPR WA ISLPLL+++ Sbjct: 104 SALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRIVSPRFWAGAISLPLLSLIFC 163 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334 F IIG +V + F+S ++ +I G+IK+ A + VA+ G+ Sbjct: 164 FIGIIGGKLVGVDWLGADEGGFWSAMQASVDWQEDIVQGIIKSVAFALVVTWVALFNGYD 223 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIID 361 + + + T VV + +V+ +D Sbjct: 224 SLPTAAGISQATTRTVVHASLLVLGLD 250 >gi|256422329|ref|YP_003122982.1| hypothetical protein Cpin_3314 [Chitinophaga pinensis DSM 2588] gi|256037237|gb|ACU60781.1| protein of unknown function DUF140 [Chitinophaga pinensis DSM 2588] Length = 245 Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 74/234 (31%), Positives = 125/234 (53%) Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 I+G + TG F + ++ IRQ + VG V +V + F+ G V+ Q Sbjct: 2 EIVGDQVLFTGRFARNIFRGGFEWGEFIRQCFIVGYLSVGLVGITGFIIGLVMTLQTQPT 61 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L FGAE + ++SI +REIG ++ A++ AG+ S+I AE+GSMK+ E+IDA+ Sbjct: 62 LKDFGAESYVPGMVSISIIREIGPVIIALICAGKIASSIGAELGSMKVTEQIDAMEVSAA 121 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 + V+ L+ RI A I +PLLTI+A+ A++G + + + +FF + ++ Sbjct: 122 NPVQYLVVTRILACTIMVPLLTIMADGLAMLGGWVGVNIQDHVSATLFFKKSFKALEFSD 181 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + +IK F AIG V +G+ + S+GK + VV + +I+ID++ Sbjct: 182 VVPSVIKTFFFGYAIGFVGCYKGYHSARGTESVGKAANSAVVSASLWIILIDAI 235 >gi|253997969|ref|YP_003050032.1| hypothetical protein Msip34_0256 [Methylovorus sp. SIP3-4] gi|253984648|gb|ACT49505.1| protein of unknown function DUF140 [Methylovorus sp. SIP3-4] Length = 263 Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 120/212 (56%), Gaps = 1/212 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 IR++Y+ GV + ++++ +F G V+A QG L ++G+ L+++ +RE+G ++T Sbjct: 48 IREIYFTGVMSLLIILVSAFFVGMVLALQGYNTLQKYGSSEAIGVLVALSLVRELGPVVT 107 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+G+AI AEIG MK E++ A+ M + + +++PR WA ++S+PLL L + Sbjct: 108 ALLFAGRAGTAITAEIGLMKTTEQLSAMEMMAVSPIARVVAPRFWAGVVSMPLLAALFSM 167 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAV 335 ++G +V + F+S+ ++ A+I G+IK+ A ++A+ EGF Sbjct: 168 VGVLGGYLVAVPVIGVDNGAFWSQMQASVDFQADIVNGVIKSVVFGVACTMIALFEGFDA 227 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + + + T VV S V+ +D + F Sbjct: 228 PPTAEGVSRATTRTVVNSSLAVLGLDFILTSF 259 >gi|163803754|ref|ZP_02197611.1| putative ABC superfamily transport protein [Vibrio sp. AND4] gi|159172438|gb|EDP57307.1| putative ABC superfamily transport protein [Vibrio sp. AND4] Length = 263 Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 118/216 (54%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q+Y VGV + ++I+ G V++ QG L +GAE ++++ LRE+G ++ Sbjct: 47 LIKQLYSVGVQSLAIIIVSGLFIGMVLSLQGYIVLVDYGAEGSLGQMVALSLLRELGPVV 106 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D ++ +I+PR WA IS+PLL ++ Sbjct: 107 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGAISMPLLAMIFM 166 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I GA +V + + + F++ S+ L +I +IK A + +A+ G+ Sbjct: 167 AVGIWGAQLVGVDWKGVDYGSFWAAMQSSVELGQDIGNSMIKCIVFAITVTWIALFNGYD 226 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV S V+ +D + F Sbjct: 227 AIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 262 >gi|32474659|ref|NP_867653.1| ABC transporter permease [Rhodopirellula baltica SH 1] gi|32445198|emb|CAD75200.1| probable permease of ABC transporter [Rhodopirellula baltica SH 1] Length = 296 Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 6/210 (2%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 +++ Y VGV +PVV L G V+A Q +Q G E +++ +RE+G + Sbjct: 68 TVLVNFYQVGVLSLPVVALTGSFIGMVLAVQSYYQFHTIGLETHLGVVINTSLVRELGPV 127 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 L A M+AGR G A+ A +G+M++ E+IDA+ TMG D + L+ PR A ++ +P LTI+A Sbjct: 128 LAATMLAGRVGGAMAAVLGTMRVTEQIDALTTMGADPIHYLVVPRFMACLLLIPALTIVA 187 Query: 275 NFSAIIGA---SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 +F I+G S++I I A + ++F G+ K+ F I I++ Sbjct: 188 DFMGIVGGYFYSVII---LGIDRAAYLHHSREGVVAFDLFNGIFKSIFFGGVIAIISCYR 244 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 GF + +GK T V S +++ ID Sbjct: 245 GFNCQPGAEGVGKAATEAFVYSFVMILAID 274 >gi|108761216|ref|YP_628530.1| putative ABC transporter permease [Myxococcus xanthus DK 1622] gi|108465096|gb|ABF90281.1| putative ABC transporter, permease protein [Myxococcus xanthus DK 1622] Length = 250 Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 64/206 (31%), Positives = 112/206 (54%), Gaps = 3/206 (1%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGV 213 L+ +GV +P+ +L + G VI+ Q + LS+FG + +++ + IL L RE+ Sbjct: 34 GLVYHTESLGVRSLPIALLTAMFAGLVISLQFGYFLSRFGVQ-YTVGRVVILTLFRELAP 92 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 +LTA+ + R GS I AE+G+M + E++DAIR +G D +R L+ PR+ A +I LP+LT+ Sbjct: 93 VLTALTVGARIGSGIAAELGAMTVTEQVDAIRALGADPLRKLVVPRVLACLIVLPVLTVF 152 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 A+ ++ ++V+ Y I +FF + + +G+ K IG+V G Sbjct: 153 ADVVGLVAGALVVNIQYAITLNLFFQGALDAVLMPDFASGVFKGAVFGLIIGLVGCFRGL 212 Query: 334 AVGVHSNSLGKKVT-TCVVQSISIVI 358 V + +G+ T T S+S+ + Sbjct: 213 TVEGGTEGVGRATTQTVATTSVSVCL 238 >gi|330432403|gb|AEC17462.1| conserved hypothetical protein [Gallibacterium anatis UMN179] Length = 261 Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 118/215 (54%), Gaps = 1/215 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 ++Q+Y +GV + +++L G V+ QG L F AE L+++ LRE+G ++T Sbjct: 45 VKQLYVLGVQSLLIIVLSGLFIGMVLGLQGYVILVDFSAETSLGQLVALSLLRELGPVVT 104 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+GSA+ AEIG MK E++ + M ++ +R +I+PR WA +I++PLL ++ Sbjct: 105 ALLFAGRAGSALTAEIGLMKATEQLSGLEMMAVNPLRRVIAPRFWAGMIAMPLLALIFTA 164 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAV 335 I G S+V + + F+S S+ +I G+IK+ A ++ +A+ G+ Sbjct: 165 VGIWGGSLVGVDWKGVDGGSFWSVMQSSVVWGKDIGNGIIKSLCFALSVVWIALFNGYNA 224 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VVQ+ +V+ +D + F Sbjct: 225 LPTSEGISQATTKTVVQASLVVLALDFILTALMFG 259 >gi|332163079|ref|YP_004299656.1| hypothetical protein YE105_C3459 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325667309|gb|ADZ43953.1| hypothetical protein YE105_C3459 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330862752|emb|CBX72894.1| UPF0393 inner membrane protein yrbE [Yersinia enterocolitica W22703] Length = 260 Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 72/218 (33%), Positives = 118/218 (54%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y VGV + ++++ G V+ QG L+ + AE ++S+ LRE+G ++ Sbjct: 44 LVKQLYSVGVQSLLIIVVSGLFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E+I ++ M +D +R +++PR WA +IS+PLLT + Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFV 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 I G S+ V WK D F F+S S ++ LIK+ A + +A+ G Sbjct: 164 AVGIWGGSVVGVDWKGIDGGF--FWSAMQSAVEWRTDLLNCLIKSLVFAVTVTWIALFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV S V+ +D + F Sbjct: 222 YDAVPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|297172194|gb|ADI23174.1| ABC-type transport system involved in resistance to organic solvents, permease component [uncultured gamma proteobacterium HF0770_11A05] Length = 220 Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 70/209 (33%), Positives = 118/209 (56%), Gaps = 3/209 (1%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + Q++++GV VV+L TG V+ Q Q + + + + ++ RE+G + T Sbjct: 1 MEQLHFIGVKSQSVVLLTGAFTGMVMCAQFYIQFHKVKMDSAVMSVXTVXMXRELGAVXT 60 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA-N 275 +MIAGR G+A+ A++G+MK+ E+IDA+RT+ V L++PR+ A++ISLPLLT A Sbjct: 61 XLMIAGRVGAAMAAQLGTMKVTEQIDALRTLATSPVDYLVAPRLLAMLISLPLLTAEAIA 120 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 S + G + ++ P ++ + T ++ +I+ GLIKA A I VA +G Sbjct: 121 ISMVSGMLVAVYLLGLDPVFLWSNMVFYTGSV-DIWMGLIKAFIFAGIIATVACHKGMHC 179 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 G + +GK T VV + SI I++ + F Sbjct: 180 GQGAEGVGKATTEAVVAA-SISILVSNFF 207 >gi|313200036|ref|YP_004038694.1| hypothetical protein MPQ_0269 [Methylovorus sp. MP688] gi|312439352|gb|ADQ83458.1| conserved hypothetical protein [Methylovorus sp. MP688] Length = 259 Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 120/212 (56%), Gaps = 1/212 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 IR++Y+ GV + ++++ +F G V+A QG L ++G+ L+++ +RE+G ++T Sbjct: 44 IREIYFTGVMSLLIILVSAFFVGMVLALQGYNTLQKYGSSEAIGVLVALSLVRELGPVVT 103 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+G+AI AEIG MK E++ A+ M + + +++PR WA ++S+PLL L + Sbjct: 104 ALLFAGRAGTAITAEIGLMKTTEQLSAMEMMAVSPIARVVAPRFWAGVVSMPLLAALFSM 163 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAV 335 ++G +V + F+S+ ++ A+I G+IK+ A ++A+ EGF Sbjct: 164 VGVLGGYLVAVPVIGVDNGAFWSQMQASVDFQADIVNGVIKSVVFGVACTMIALFEGFDA 223 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + + + T VV S V+ +D + F Sbjct: 224 PPTAEGVSRATTRTVVNSSLAVLGLDFILTSF 255 >gi|327540665|gb|EGF27237.1| ABC transporter permease protein [Rhodopirellula baltica WH47] Length = 296 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 6/210 (2%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 +++ Y VGV +PVV L G V+A Q +Q G E +++ +RE+G + Sbjct: 68 TVLVNFYQVGVLSLPVVALTGSFIGMVLAVQSYYQFHTIGLETHLGVVINTSLVRELGPV 127 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 L A M+AGR G A+ A +G+M++ E+IDA+ TMG D + L+ PR A ++ +P LTI+A Sbjct: 128 LAATMLAGRVGGAMAAVLGTMRVTEQIDALTTMGADPIHYLVVPRFMACLLLIPALTIVA 187 Query: 275 NFSAIIGA---SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 +F I+G S++I I A + ++F G+ K+ F I I++ Sbjct: 188 DFMGIVGGYFYSVII---LGIDRAAYLHHSREGVVAFDLFNGIFKSIFFGGVIAIISCYR 244 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 GF + +GK T V S +++ ID Sbjct: 245 GFNCQPGAEGVGKAATEAFVYSFVMILAID 274 >gi|238764271|ref|ZP_04625223.1| hypothetical protein ykris0001_25370 [Yersinia kristensenii ATCC 33638] gi|238697552|gb|EEP90317.1| hypothetical protein ykris0001_25370 [Yersinia kristensenii ATCC 33638] Length = 260 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 72/218 (33%), Positives = 118/218 (54%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y VGV + ++++ G V+ QG L+ + AE ++S+ LRE+G ++ Sbjct: 44 LVKQLYSVGVQSLLIIVVSGLFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E+I ++ M +D +R +++PR WA +IS+PLLT + Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFV 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 I G S+ V WK D F F+S S ++ LIK+ A + +A+ G Sbjct: 164 AVGIWGGSVVGVDWKGIDSGF--FWSAMQSAVEWRTDLLNCLIKSLVFAITVTWIALFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV S V+ +D + F Sbjct: 222 YDAVPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|163783076|ref|ZP_02178071.1| hypothetical protein HG1285_00835 [Hydrogenivirga sp. 128-5-R1-1] gi|159881756|gb|EDP75265.1| hypothetical protein HG1285_00835 [Hydrogenivirga sp. 128-5-R1-1] Length = 248 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 65/205 (31%), Positives = 111/205 (54%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I Q Y+ VV++ S TG VIA Q +F AE ++++ RE+G +LT Sbjct: 36 IDQFTYIAAETSLVVLVTSTFTGGVIALQTYSTFHRFNAEYLIGAVVALSMGRELGPVLT 95 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 ++M+ R GSA+ A IG+M+I ++IDA+ M ++ VR L++PRI+A + +PLLTI++N Sbjct: 96 SLMVVARVGSAMTANIGTMRITQQIDALEVMAVNPVRYLVTPRIFATTVGVPLLTIVSNV 155 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + + G +V K + + +++ + +I GL KA I V+ GF Sbjct: 156 AGMFGGWLVATKLFKVNEYLYWQKMIDLTEFYDIVGGLYKAFVFGFIIAAVSCYFGFYTR 215 Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361 + +G+ T VV + +++I D Sbjct: 216 GGTEGVGRSTTNSVVTASMLILITD 240 >gi|292486812|ref|YP_003529682.1| hypothetical protein EAMY_0324 [Erwinia amylovora CFBP1430] gi|292900790|ref|YP_003540159.1| membrane protein [Erwinia amylovora ATCC 49946] gi|291200638|emb|CBJ47770.1| putative membrane protein [Erwinia amylovora ATCC 49946] gi|291552229|emb|CBA19266.1| UPF0393 inner membrane protein yrbE [Erwinia amylovora CFBP1430] gi|312170880|emb|CBX79139.1| UPF0393 inner membrane protein yrbE [Erwinia amylovora ATCC BAA-2158] Length = 260 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 71/217 (32%), Positives = 118/217 (54%), Gaps = 3/217 (1%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 L++Q+Y +GV + +V++ G V+ QG L +GAE S+ +M L L RE+G + Sbjct: 44 LVKQLYSIGVLSLLIVVVSGLFIGMVLGLQGYLVLKTYGAEA-SLGMMVALSLLRELGPV 102 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +ISPR WA IS+PLLT++ Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRIISPRFWAGFISMPLLTLIF 162 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGF 333 I+G ++V + I F+S + L +I IK+ A + +A+ G+ Sbjct: 163 VAVGILGGTLVGVSWKGIDPGYFWSAMQNAVDLQTDIINCTIKSAVFALTVTWIALFNGY 222 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 223 DAIPTSEGISRATTRTVVHASLAVLGLDFVLTALMFG 259 >gi|148263316|ref|YP_001230022.1| hypothetical protein Gura_1245 [Geobacter uraniireducens Rf4] gi|146396816|gb|ABQ25449.1| protein of unknown function DUF140 [Geobacter uraniireducens Rf4] Length = 257 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 66/222 (29%), Positives = 120/222 (54%), Gaps = 6/222 (2%) Query: 143 CASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDL 202 + Y ++ F Q+ +GV + +VIL TG V+A Q QL F A + + Sbjct: 32 VSPPYYYRDF----TTQLDKIGVGSLFIVILTGLFTGMVMALQALIQLKPFAATSYVGGM 87 Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 +++ ++E+G +L+A+M+ GR GSAI AEIG+M + E+IDA+R G D V+ L++ R+ A Sbjct: 88 VAVTMIKELGPVLSALMVTGRVGSAITAEIGTMVVTEQIDAMRVEGTDIVKRLVTSRLKA 147 Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322 +++++PLLTI+ + +++G I + YD+ +++ ++ G+ K F Sbjct: 148 ILVAMPLLTIITDAISLLGGYI-MSASYDMNPIMYWKSIPQFMVFQDLIEGVAKPAFFGF 206 Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 I ++ GF + +G VV S S++I++ F Sbjct: 207 VIAMIGCHVGFNTRGGAEGVGASAKRAVVIS-SVIILVSDFF 247 >gi|78222008|ref|YP_383755.1| hypothetical protein Gmet_0788 [Geobacter metallireducens GS-15] gi|78193263|gb|ABB31030.1| protein of unknown function DUF140 [Geobacter metallireducens GS-15] Length = 257 Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 55/160 (34%), Positives = 99/160 (61%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q++++G + V+ L + TG V+ QG + L++FG+E +++ +RE+G +LTA Sbjct: 46 KQIHFIGTKSLFVITLTASFTGMVLGLQGYYTLAKFGSEGMLGSAVALSLIRELGPVLTA 105 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +M+ GR+GSAI AEIG MKI E+IDA++TM L+ + LISP+I ++++PLL + + Sbjct: 106 LMVVGRAGSAITAEIGIMKITEQIDAMKTMALEPFKYLISPKIVGALVAVPLLCAIFDVV 165 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 I G +V K + +F + ++++G +K+ Sbjct: 166 GIYGGYLVGVKLLGVNPGAYFHEMERSVEWKDVWSGFVKS 205 >gi|22124065|ref|NP_667488.1| hypothetical protein y0145 [Yersinia pestis KIM 10] gi|45443560|ref|NP_995099.1| hypothetical protein YP_3829 [Yersinia pestis biovar Microtus str. 91001] gi|51597810|ref|YP_072001.1| ABC transporter, permease subunit, toluene tolerance protein [Yersinia pseudotuberculosis IP 32953] gi|108809720|ref|YP_653636.1| hypothetical protein YPA_3729 [Yersinia pestis Antiqua] gi|108813616|ref|YP_649383.1| hypothetical protein YPN_3456 [Yersinia pestis Nepal516] gi|145597639|ref|YP_001161715.1| hypothetical protein YPDSF_0323 [Yersinia pestis Pestoides F] gi|153950379|ref|YP_001399442.1| ABC transporter permease [Yersinia pseudotuberculosis IP 31758] gi|153997349|ref|ZP_02022449.1| putative membrane protein [Yersinia pestis CA88-4125] gi|162419182|ref|YP_001605691.1| hypothetical protein YpAngola_A1145 [Yersinia pestis Angola] gi|165928109|ref|ZP_02223941.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Orientalis str. F1991016] gi|165937439|ref|ZP_02226002.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Orientalis str. IP275] gi|166011407|ref|ZP_02232305.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Antiqua str. E1979001] gi|166212216|ref|ZP_02238251.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Antiqua str. B42003004] gi|167400680|ref|ZP_02306189.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420726|ref|ZP_02312479.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426982|ref|ZP_02318735.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470182|ref|ZP_02334886.1| putative ABC transporter, permease protein YrbE [Yersinia pestis FV-1] gi|170022764|ref|YP_001719269.1| hypothetical protein YPK_0513 [Yersinia pseudotuberculosis YPIII] gi|186897002|ref|YP_001874114.1| hypothetical protein YPTS_3704 [Yersinia pseudotuberculosis PB1/+] gi|218930586|ref|YP_002348461.1| hypothetical protein YPO3574 [Yersinia pestis CO92] gi|229836870|ref|ZP_04457035.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Yersinia pestis Pestoides A] gi|229839230|ref|ZP_04459389.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229899795|ref|ZP_04514936.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229904110|ref|ZP_04519221.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Yersinia pestis Nepal516] gi|270488545|ref|ZP_06205619.1| conserved hypothetical protein [Yersinia pestis KIM D27] gi|294505304|ref|YP_003569366.1| hypothetical protein YPZ3_3195 [Yersinia pestis Z176003] gi|21956812|gb|AAM83739.1|AE013614_13 hypothetical protein y0145 [Yersinia pestis KIM 10] gi|45438429|gb|AAS63976.1| putative membrane protein [Yersinia pestis biovar Microtus str. 91001] gi|51591092|emb|CAH22756.1| ABC transporter, permease subunit, toluene tolerance protein [Yersinia pseudotuberculosis IP 32953] gi|108777264|gb|ABG19783.1| membrane protein [Yersinia pestis Nepal516] gi|108781633|gb|ABG15691.1| putative membrane protein [Yersinia pestis Antiqua] gi|115349197|emb|CAL22162.1| putative membrane protein [Yersinia pestis CO92] gi|145209335|gb|ABP38742.1| membrane protein [Yersinia pestis Pestoides F] gi|149288986|gb|EDM39066.1| putative membrane protein [Yersinia pestis CA88-4125] gi|152961874|gb|ABS49335.1| putative ABC transporter, permease protein YrbE [Yersinia pseudotuberculosis IP 31758] gi|162351997|gb|ABX85945.1| putative ABC transporter, permease protein YrbE [Yersinia pestis Angola] gi|165914544|gb|EDR33158.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Orientalis str. IP275] gi|165919883|gb|EDR37184.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Orientalis str. F1991016] gi|165989791|gb|EDR42092.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Antiqua str. E1979001] gi|166206962|gb|EDR51442.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Antiqua str. B42003004] gi|166961532|gb|EDR57553.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050048|gb|EDR61456.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054022|gb|EDR63850.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169749298|gb|ACA66816.1| protein of unknown function DUF140 [Yersinia pseudotuberculosis YPIII] gi|186700028|gb|ACC90657.1| protein of unknown function DUF140 [Yersinia pseudotuberculosis PB1/+] gi|229678228|gb|EEO74333.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Yersinia pestis Nepal516] gi|229687287|gb|EEO79362.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229695596|gb|EEO85643.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229705813|gb|EEO91822.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Yersinia pestis Pestoides A] gi|262363367|gb|ACY60088.1| hypothetical protein YPD4_3184 [Yersinia pestis D106004] gi|262367255|gb|ACY63812.1| hypothetical protein YPD8_3142 [Yersinia pestis D182038] gi|270337049|gb|EFA47826.1| conserved hypothetical protein [Yersinia pestis KIM D27] gi|294355763|gb|ADE66104.1| hypothetical protein YPZ3_3195 [Yersinia pestis Z176003] gi|320017116|gb|ADW00688.1| putative toluene transporter subunit: membrane component of ABC superfamily [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 260 Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 72/218 (33%), Positives = 118/218 (54%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q+Y VGV + ++++ G V+ QG L+ + AE ++S+ LRE+G ++ Sbjct: 44 LIKQLYSVGVQSLLIIVVSGLFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E+I ++ M +D +R +++PR WA +IS+PLLT + Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFV 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 I G S+ V WK D F F+S + ++ LIK+ A + +A+ G Sbjct: 164 AVGIWGGSVVGVDWKGIDSGF--FWSAMQNAVEWRTDLLNCLIKSLVFALTVTWIALFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV S V+ +D + F Sbjct: 222 YDAVPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|84387816|ref|ZP_00990831.1| putative ABC superfamily transport protein [Vibrio splendidus 12B01] gi|84377331|gb|EAP94199.1| putative ABC superfamily transport protein [Vibrio splendidus 12B01] Length = 259 Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 71/224 (31%), Positives = 121/224 (54%), Gaps = 2/224 (0%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 + K F L ++Q+Y VGV + ++++ G V++ QG L +GAE ++++ Sbjct: 36 RLKNFPL-FVKQLYSVGVQSLAIILVSGLFIGMVLSLQGYVVLIDYGAEGNLGQMVALSL 94 Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267 LRE+G ++TA++ AGR+GSA+ AEIG MK E+I ++ M +D ++ +I+PR+WA +IS+ Sbjct: 95 LRELGPVVTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLKRIIAPRLWAGLISM 154 Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGI 326 PLL ++ I GA +V + I F+S S+ L +I IK A + Sbjct: 155 PLLAMIFMAVGIWGAQLVGVDWKGIDHGSFWSAMQSSVELGRDIGNSTIKCMVFAITVTW 214 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +A+ G+ S + + T VV S V+ +D + F Sbjct: 215 IALFNGYDAVPTSEGISQATTRTVVHSSLAVLGLDFVLTALMFG 258 >gi|300718605|ref|YP_003743408.1| toluene tolerance ABC transporter, permease subunit [Erwinia billingiae Eb661] gi|299064441|emb|CAX61561.1| toluene tolerance ABC transporter, permease subunit [Erwinia billingiae Eb661] Length = 257 Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 73/226 (32%), Positives = 124/226 (54%), Gaps = 5/226 (2%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 +F+ LI+Q+Y +GV + +V++ G V+ QG L+ +GA+ L+++ Sbjct: 33 RFRKHAPLLIKQLYSIGVLSLLIVVVSGLFIGMVLGLQGYLVLNTYGADSSLGMLVALSL 92 Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267 LRE+G ++TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +ISPR WA IS+ Sbjct: 93 LRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRIISPRFWAGFISM 152 Query: 268 PLLTILANFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAI 324 PLLT++ I+G +I V WK D F F+S + + +I +IK+ A + Sbjct: 153 PLLTLIFVAVGIMGGAIVGVSWKGIDSGF--FWSAMQNAVDVRTDILNCVIKSAVFAFTV 210 Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +A+ G+ S + + T VV + V+ +D + F Sbjct: 211 TWIALFNGYDAIPTSEGISRATTRTVVHASLAVLGLDFVLTALMFG 256 >gi|323491744|ref|ZP_08096921.1| hypothetical protein VIBR0546_01054 [Vibrio brasiliensis LMG 20546] gi|323314000|gb|EGA67087.1| hypothetical protein VIBR0546_01054 [Vibrio brasiliensis LMG 20546] Length = 262 Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 69/216 (31%), Positives = 118/216 (54%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q+Y VGV + +++L G V++ QG L FGAE ++++ LRE+G ++ Sbjct: 46 LIKQLYTVGVQSLIIIVLSGLFIGMVLSLQGYVILVDFGAEGALGQMVALSLLRELGPVV 105 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D ++ +I+PR WA +IS+PLL ++ Sbjct: 106 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLKRVIAPRFWAGVISMPLLVMIFM 165 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G +V + I F+S ++ L +I +IK+ A + +A+ G+ Sbjct: 166 AVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSMIKSIVFAITVTWIALFNGYD 225 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV S V+ +D + F Sbjct: 226 AIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 261 >gi|163784036|ref|ZP_02178993.1| hypothetical protein HG1285_11198 [Hydrogenivirga sp. 128-5-R1-1] gi|159880693|gb|EDP74240.1| hypothetical protein HG1285_11198 [Hydrogenivirga sp. 128-5-R1-1] Length = 248 Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 65/206 (31%), Positives = 111/206 (53%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +I+Q+ +G P++I+ F TG V+ + +F AE L+S+ RE+ +L Sbjct: 35 IIKQIAVIGADAAPLIIITGFFTGGVLVVETYPTFHKFNAEFLIGALVSLSLSRELSPVL 94 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A+++ RSGSA+ A IG+M+I E+IDA+ + ++ VR LI+PRI A + +P LTIL+ Sbjct: 95 VALLVTARSGSAMAANIGTMRITEQIDALEVLAVNPVRYLIAPRIIASVFVVPSLTILSI 154 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 S I G V + Y + +F + +I G+ K+ + IV+ G+ Sbjct: 155 ASGIAGGYFVATELYSVNSFMFIEKMKDLTEFYDILGGIYKSIAFGVLLTIVSCYFGYVA 214 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361 + +G+ TT VV S +++I+D Sbjct: 215 KGGAEGVGRATTTAVVTSSVLILIVD 240 >gi|283788167|ref|YP_003368032.1| putative organic solvent tolerance protein [Citrobacter rodentium ICC168] gi|282951621|emb|CBG91321.1| putative organic solvent tolerance protein [Citrobacter rodentium ICC168] Length = 260 Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 74/218 (33%), Positives = 118/218 (54%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y VGV + ++++ G V+ QG L+ + AE L+++ LRE+G ++ Sbjct: 44 LVRQLYNVGVLSMLIILVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ AGR+GSA+ AEIG M+ E++ ++ M +D +R +ISPR WA +ISLPLLTIL Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTILFV 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEG 332 I G S+ V WK D F F+S + ++ LIK+ A + +A+ G Sbjct: 164 AVGIWGGSLVGVSWKGIDAGF--FWSAMQNAVDWRLDLVNCLIKSVVFAITVTWIALFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV S V+ +D + F Sbjct: 222 YDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|123443934|ref|YP_001007905.1| hypothetical protein YE3751 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090895|emb|CAL13777.1| putative membrane protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 260 Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 72/218 (33%), Positives = 118/218 (54%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y VGV + ++++ G V+ QG L+ + AE ++S+ LRE+G ++ Sbjct: 44 LVKQLYSVGVQSLLIIVVSGLFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E+I ++ M +D +R +++PR WA +IS+PLLT + Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFV 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 I G S+ V WK D F F+S S ++ LIK+ A + +A+ G Sbjct: 164 AVGIWGGSVVGVDWKGIDGGF--FWSAMQSAVEWRTDLLNCLIKSLVFAITVTWIALFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV S V+ +D + F Sbjct: 222 YDAVPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|121635620|ref|YP_975865.1| putative ABC transport inner membrane subunit [Neisseria meningitidis FAM18] gi|120867326|emb|CAM11097.1| putative ABC transport inner membrane subunit [Neisseria meningitidis FAM18] gi|325131371|gb|EGC54080.1| putative membrane protein [Neisseria meningitidis M6190] gi|325133423|gb|EGC56087.1| putative membrane protein [Neisseria meningitidis M13399] gi|325141491|gb|EGC63964.1| putative membrane protein [Neisseria meningitidis 961-5945] gi|325143674|gb|EGC65993.1| putative membrane protein [Neisseria meningitidis M01-240013] gi|325199054|gb|ADY94510.1| putative membrane protein [Neisseria meningitidis G2136] gi|325206870|gb|ADZ02323.1| putative membrane protein [Neisseria meningitidis M04-240196] Length = 258 Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 67/215 (31%), Positives = 120/215 (55%), Gaps = 3/215 (1%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215 +RQ+Y+ GV V +V + G V+ QG QLS+F A+I + + L LRE+G +L Sbjct: 43 VRQVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASL-LRELGPVL 101 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ A +G A+ +EIG MK E+++A+ M ++ V +++PR WA + S+PLL + N Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFN 161 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 + I GA +V + + +F+S+ + T+ ++ GLIK+ A+ ++A+ +GF Sbjct: 162 VAGIFGAYLVGVSWLSLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFH 221 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 S + + T VV S ++ +D + + F Sbjct: 222 CVPTSEGILRASTRTVVSSALTILAVDFILTAWMF 256 >gi|261250143|ref|ZP_05942719.1| uncharacterized ABC transporter permease component YrbE [Vibrio orientalis CIP 102891] gi|260939259|gb|EEX95245.1| uncharacterized ABC transporter permease component YrbE [Vibrio orientalis CIP 102891] Length = 262 Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 118/216 (54%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q+Y VGV + +++L G V++ QG L FGAE ++++ LRE+G ++ Sbjct: 46 LIKQLYSVGVQSLIIIVLSGLFIGMVLSLQGYVILVDFGAEGALGQMVALSLLRELGPVV 105 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D ++ +I+PR WA +IS+P+L ++ Sbjct: 106 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLKRVIAPRFWAGVISMPMLAMIFM 165 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G +V + I F+S ++ L +I +IK+ A + +A+ G+ Sbjct: 166 AVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSMIKSVVFAITVTWIALFNGYD 225 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV S V+ +D + F Sbjct: 226 AIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 261 >gi|261378129|ref|ZP_05982702.1| toluene tolerance ABC efflux transporter, permease [Neisseria cinerea ATCC 14685] gi|269145589|gb|EEZ72007.1| toluene tolerance ABC efflux transporter, permease [Neisseria cinerea ATCC 14685] Length = 258 Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 68/215 (31%), Positives = 120/215 (55%), Gaps = 3/215 (1%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215 +RQ+Y+ GV V +V + G V+ QG QLS+F A+I + + L LRE+G +L Sbjct: 43 VRQVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASL-LRELGPVL 101 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ A +G A+ +EIG MK E+++A+ M ++ V +++PR WA + S+PLL + N Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFN 161 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 + I GA +V + + +F+S+ + T+ ++ GLIK+ A+ ++A+ +GF Sbjct: 162 VAGIFGAYLVGVSWLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFH 221 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 S + + T VV S ++ ID + + F Sbjct: 222 CVPTSEGILRASTRTVVSSALTILAIDFVLTAWMF 256 >gi|206890273|ref|YP_002248716.1| toluene tolerance protein Ttg2B [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742211|gb|ACI21268.1| toluene tolerance protein Ttg2B [Thermodesulfovibrio yellowstonii DSM 11347] Length = 256 Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 67/221 (30%), Positives = 119/221 (53%), Gaps = 4/221 (1%) Query: 147 YKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206 +KF+ FL RQ+ + G + VVI +G V+A QG + L++FGAE ++++ Sbjct: 38 FKFRNFL----RQVRFFGNKSMIVVIFTGAFSGMVLALQGYYALNKFGAEALLGPVVALS 93 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 +RE+G +L A+M+ GR+GSA+ AEIG M+I E+IDA+ M ++ ++ ++ P I A I++ Sbjct: 94 LIRELGPVLCALMVTGRAGSAVTAEIGIMRITEQIDALTVMAVNPMKYVVVPNILAGIVA 153 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326 PLLT + + I G +V + +FS+ + +I GL K+ + Sbjct: 154 FPLLTAVFDVIGIYGGYLVSVHALGLSEGTYFSQMELYVDMEDIRIGLYKSLSFGLLVTW 213 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + G+ G + + + T VV S ++++ D + F Sbjct: 214 ICTFMGYTSGYGARGVSRATTNAVVLSSVVILLWDYMLGAF 254 >gi|225871870|ref|YP_002753324.1| transporter, putative ER-chloroplast lipid translocase (ECLT) family [Acidobacterium capsulatum ATCC 51196] gi|225792942|gb|ACO33032.1| transporter, putative ER-chloroplast lipid translocase (ECLT) family [Acidobacterium capsulatum ATCC 51196] Length = 259 Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 110/203 (54%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 Q Y+G+ +P+VIL F TG V+A A L+QFGA + L+S+ ++E+G +LT++ Sbjct: 44 QADYIGIGSLPIVILTGFFTGGVLALNSASTLAQFGATAVTGQLVSLSMIKELGPVLTSL 103 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 M++GR+ S + +E+GSM + E++DA+R +G D ++ L+ PRI A + + LTI+++ Sbjct: 104 MVSGRNASGMASELGSMIVTEQVDAMRALGTDPMKKLVMPRIVATVCMMFFLTIVSDAIG 163 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 +G + V + +F + ++F GLIK I + G Sbjct: 164 TLGGAFVSGILLGQNTSQYFHTAYQALRYPDVFEGLIKPVIFGFIIATIGCFYGMKTRGG 223 Query: 339 SNSLGKKVTTCVVQSISIVIIID 361 + +G+ T VV + ++I D Sbjct: 224 TQGVGRSTTQAVVVASVLIIATD 246 >gi|312959004|ref|ZP_07773523.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas fluorescens WH6] gi|311286774|gb|EFQ65336.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas fluorescens WH6] Length = 265 Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 63/215 (29%), Positives = 122/215 (56%), Gaps = 1/215 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I+Q++ VGV + ++++ G V+A QG LS +G+E ++++ LRE+G ++T Sbjct: 49 IKQLHSVGVMSLVIIVVSGIFIGMVLALQGFNILSGYGSEQAVGQMVALTLLRELGPVVT 108 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA ISLPLL ++ + Sbjct: 109 ALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLAMIFSV 168 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I G S V + + ++ ++ T ++ G+IK+ A + +A+ +G+ Sbjct: 169 VGIWGGSWVAVDWLGVYDGSYWGNMQNSVTFNGDVLNGIIKSIVFAFVVTWIAVFQGYDC 228 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 229 EPTSEGISRATTKTVVYASLAVLGLDFILTALMFG 263 >gi|317050884|ref|YP_004112000.1| hypothetical protein Selin_0700 [Desulfurispirillum indicum S5] gi|316945968|gb|ADU65444.1| protein of unknown function DUF140 [Desulfurispirillum indicum S5] Length = 256 Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 73/186 (39%), Positives = 105/186 (56%), Gaps = 7/186 (3%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q +GV+ + VV+L TG V+A Q SQF AE + ++ RE+G +LTA Sbjct: 45 KQFESIGVNSIFVVLLTGTFTGMVLALQLYIGFSQFHAEYLVGAVSALAIFRELGPVLTA 104 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +M+ R+GSA+ AE+G+MK+ E+IDA+RTM +D + L +PRI A + LP+LT++AN Sbjct: 105 LMVTARAGSAMAAELGTMKVTEQIDALRTMAVDPHQYLATPRILASFVMLPVLTMVANAV 164 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK-APF------MACAIGIVAMK 330 AI G V K I VF + + +I GLIK A F + C IG+ A K Sbjct: 165 AIGGCYFVGVKLLGINPVVFVDQIIIFVDMGDIINGLIKSAAFGLVMGSVCCGIGMNASK 224 Query: 331 EGFAVG 336 VG Sbjct: 225 GAAGVG 230 >gi|260770986|ref|ZP_05879915.1| uncharacterized ABC transporter permease component YrbE [Vibrio furnissii CIP 102972] gi|260614223|gb|EEX39413.1| uncharacterized ABC transporter permease component YrbE [Vibrio furnissii CIP 102972] gi|315179032|gb|ADT85946.1| ABC-type transport system involved in resistance to organic solvents, permease component [Vibrio furnissii NCTC 11218] Length = 263 Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 118/216 (54%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q+Y VGV + ++++ G V++ QG L +GAE ++++ LRE+G ++ Sbjct: 47 LIKQLYSVGVQSLAIIVVSGLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVV 106 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D ++ +I+PR+WA +IS+PLL ++ Sbjct: 107 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRLWAGLISMPLLAMIFM 166 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G +V + I F+S ++ L +I +IK A + +A+ G+ Sbjct: 167 AVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGEDIGNSVIKCVAFAITVTWIALFNGYD 226 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV S V+ +D + F Sbjct: 227 AIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 262 >gi|149277771|ref|ZP_01883911.1| ABC transporter, permease [Pedobacter sp. BAL39] gi|149231459|gb|EDM36838.1| ABC transporter, permease [Pedobacter sp. BAL39] Length = 269 Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 71/243 (29%), Positives = 127/243 (52%), Gaps = 7/243 (2%) Query: 134 LVISNTGEFCASSYKFKGFLL-----SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 L + + +F +K +GFL L+RQ Y +G + ++ L F+TG V +Q Sbjct: 26 LTLYDVCQFVTRFFK-EGFLPPYEGKELMRQCYDIGYRSLALISLTGFITGVVFTKQSRP 84 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L++FGA + L+ I LR + LLTA++ AG+ GS+I AE+GSM++ E+IDA+ Sbjct: 85 SLAEFGATSWLPSLVGIALLRTLAPLLTALIAAGKVGSSIGAELGSMRVTEQIDAMEVSA 144 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + + L+S R+ A I++P+LT ++GA + + + D FF + T Sbjct: 145 TNPFKFLVSTRVMASTITIPILTFYTAMVGMLGALLNVSLFEDTSARAFFQMSLESITFL 204 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 +I +KA IG+V +G+ + +GK + VV + +I I+ + ++ + Sbjct: 205 DITASTVKAILFGFTIGMVGCYQGYNSSKGTEGVGKAANSAVVIGM-FLIFIEEVISVQF 263 Query: 369 FAI 371 F++ Sbjct: 264 FSL 266 >gi|109896888|ref|YP_660143.1| hypothetical protein Patl_0560 [Pseudoalteromonas atlantica T6c] gi|109699169|gb|ABG39089.1| protein of unknown function DUF140 [Pseudoalteromonas atlantica T6c] Length = 259 Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 121/216 (56%), Gaps = 1/216 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I+Q+Y VGV + ++++ G V+A QG L +GAE ++++ LRE+G ++T Sbjct: 43 IKQIYVVGVQSLLIIVVSGLFIGMVMALQGYTILVDYGAEGSLGPMVALSLLRELGPVVT 102 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+GSA+ AEIG MK E++ ++ M +D +R +++PR+WA IIS+P+L ++ + Sbjct: 103 ALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVVAPRLWAGIISMPMLALIFSA 162 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I+G +V + + ++S S+ ++ G+IK A I +A+ +G+ Sbjct: 163 VGILGGHLVGVDWLGVDVGSYWSIMQSSVDWNEDVVNGIIKTLVFAFVITWIAIFKGYDA 222 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 S + K T VV S V+ +D + F I Sbjct: 223 VPTSEGISKATTETVVFSSLAVLGLDFILTALMFGI 258 >gi|254509100|ref|ZP_05121202.1| ABC-type transport system involved in resistance to organic solvents, permease component [Vibrio parahaemolyticus 16] gi|219547981|gb|EED25004.1| ABC-type transport system involved in resistance to organic solvents, permease component [Vibrio parahaemolyticus 16] Length = 263 Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 69/216 (31%), Positives = 118/216 (54%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q+Y VGV + +++L G V++ QG L FGAE ++++ LRE+G ++ Sbjct: 47 LIKQLYSVGVQSLLIIVLSGLFIGMVLSLQGYVILIDFGAEGALGQMVALSLLRELGPVV 106 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D ++ +I+PR WA +IS+PLL ++ Sbjct: 107 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLKRVIAPRFWAGVISMPLLAMIFM 166 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G +V + I F++ S+ L +I +IK+ A + +A+ G+ Sbjct: 167 AVGIWGGQLVGVDWKGIDHGSFWAAMQSSVELGQDIGNSMIKSLAFAITVTWIALFNGYD 226 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV S V+ +D + F Sbjct: 227 AIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 262 >gi|222054639|ref|YP_002537001.1| protein of unknown function DUF140 [Geobacter sp. FRC-32] gi|221563928|gb|ACM19900.1| protein of unknown function DUF140 [Geobacter sp. FRC-32] Length = 258 Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 73/254 (28%), Positives = 135/254 (53%), Gaps = 15/254 (5%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGF---LLSLIRQMYYVGVSGVP 169 IG+K++KF I+G ++ G+ + Y F+ L S+ QM +G +P Sbjct: 7 RIGRKVIKF-------HEIIGEMLILLGQ---TVYFFREAPRNLASIFAQMAIIGYETLP 56 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V +++F G V+A Q +L+++G++ ++ +RE+G ++T+ ++AGR GSA+ Sbjct: 57 VASVMAFFVGMVLALQTGVELNKYGSQDIIGAIVGHSMVRELGPVMTSFLVAGRVGSAMA 116 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV--IW 287 AE+G MK+ EEIDA++T+ ++ VR L PR A I+ +P L I ++ I+G +I+ + Sbjct: 117 AELGVMKVYEEIDALKTLDINPVRYLAMPRFIACIVCVPALVIYSDCIGIVGGAIISNLH 176 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + ++ ++ + I GLIKA + +V+ GF + +G T Sbjct: 177 PKIFVSYSTYYDSLTAALKFQEIGNGLIKAFVFGAIVALVSCYVGFKTSGGARGIGISTT 236 Query: 348 TCVVQSISIVIIID 361 VV S ++++ D Sbjct: 237 RSVVWSFMLILVAD 250 >gi|259907019|ref|YP_002647375.1| ABC transporter, permease subunit, probable toluene tolerance protein [Erwinia pyrifoliae Ep1/96] gi|224962641|emb|CAX54096.1| ABC transporter, permease subunit, probable toluene tolerance protein [Erwinia pyrifoliae Ep1/96] gi|283476814|emb|CAY72652.1| UPF0393 inner membrane protein yrbE [Erwinia pyrifoliae DSM 12163] Length = 260 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 74/227 (32%), Positives = 123/227 (54%), Gaps = 7/227 (3%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 +F+ L++Q+Y +GV + +V++ G V+ QG L +GAE S+ +M L Sbjct: 36 RFRKHAPLLVKQLYNIGVLSLLIVVVSGLFIGMVLGLQGYLILKTYGAEA-SLGMMVALS 94 Query: 208 L-REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 L RE+G +++A++ AGR+GSA+ AEIG MK E++ ++ M +D +R +ISPR WA IS Sbjct: 95 LLRELGPVVSALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRIISPRFWAGFIS 154 Query: 267 LPLLTILANFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACA 323 +PLLT++ I+G ++ V WK D F F+S + L +I IK+ A Sbjct: 155 MPLLTLIFVAVGILGGALVGVSWKGIDSGF--FWSAMQNAVDLQTDIINCTIKSAVFAVT 212 Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +A+ G+ S + + T VV + V+ +D + F Sbjct: 213 VTWIALFNGYDAIPTSEGISRATTRTVVHASLAVLGLDFVLTALMFG 259 >gi|157148765|ref|YP_001456084.1| hypothetical protein CKO_04597 [Citrobacter koseri ATCC BAA-895] gi|157085970|gb|ABV15648.1| hypothetical protein CKO_04597 [Citrobacter koseri ATCC BAA-895] Length = 260 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 74/218 (33%), Positives = 118/218 (54%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y VGV + ++I+ G V+ QG L+ + AE L+++ LRE+G ++ Sbjct: 44 LVRQLYNVGVLSMLIIIVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ AGR+GSA+ AEIG M+ E++ ++ M +D +R +ISPR+WA +ISLPLLTI+ Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRLWAGVISLPLLTIIFV 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEG 332 I G S+ V WK D F F+S ++ LIK+ A + +A+ G Sbjct: 164 AVGIWGGSLVGVSWKGIDAGF--FWSAMQDAVDWRLDLVNCLIKSVVFAITVTWIALFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV S V+ +D + F Sbjct: 222 YDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|262273844|ref|ZP_06051657.1| uncharacterized ABC transporter permease component YrbE [Grimontia hollisae CIP 101886] gi|262222259|gb|EEY73571.1| uncharacterized ABC transporter permease component YrbE [Grimontia hollisae CIP 101886] Length = 260 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 66/216 (30%), Positives = 118/216 (54%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+ Q+Y VGV + ++++ G V++ QG L+ FGAE ++++ LRE+G ++ Sbjct: 44 LLTQIYSVGVRSLAIIMVSGLFIGMVLSLQGYLVLADFGAESSLGQMVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +++PR WA +IS+PLL ++ Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLAMIFM 163 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G +V + I + +++ S+ L +I IK+ A + +A+ G+ Sbjct: 164 MVGIWGGQLVGVDWKGIDYGSYWAVMQSSVELGYDIGQSFIKSLVFAITVTWIALFNGYD 223 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV S V+ +D + F Sbjct: 224 AIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|310766231|gb|ADP11181.1| ABC transporter, permease subunit, probable toluene tolerance protein [Erwinia sp. Ejp617] Length = 235 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 74/227 (32%), Positives = 123/227 (54%), Gaps = 7/227 (3%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 +F+ L++Q+Y +GV + +V++ G V+ QG L +GAE S+ +M L Sbjct: 11 RFRKHAPLLVKQLYNIGVLSLLIVVVSGLFIGMVLGLQGYLILKTYGAEA-SLGMMVALS 69 Query: 208 L-REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 L RE+G +++A++ AGR+GSA+ AEIG MK E++ ++ M +D +R +ISPR WA IS Sbjct: 70 LLRELGPVVSALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRIISPRFWAGFIS 129 Query: 267 LPLLTILANFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACA 323 +PLLT++ I+G ++ V WK D F F+S + L +I IK+ A Sbjct: 130 MPLLTLIFVAVGILGGALVGVSWKGIDSGF--FWSAMQNAVDLQTDIINCTIKSAVFAVT 187 Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +A+ G+ S + + T VV + V+ +D + F Sbjct: 188 VTWIALFNGYDAIPTSEGISRATTRTVVHASLAVLGLDFVLTALMFG 234 >gi|318604041|emb|CBY25539.1| uncharacterized ABC transporter, permease component YrbE [Yersinia enterocolitica subsp. palearctica Y11] Length = 260 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 72/218 (33%), Positives = 118/218 (54%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y VGV + ++++ G V+ QG L+ + AE ++S+ LRE+G ++ Sbjct: 44 LVKQLYSVGVQSLLIIVVSGLFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E+I ++ M +D +R +++PR WA +IS+PLLT + Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFV 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 I G S+ V WK D F F+S S ++ LIK+ A + +A+ G Sbjct: 164 AVGIWGGSVVGVDWKGIDGGF--FWSAMQSAVEWRTDLLNCLIKSLVFAITVMWIALFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV S V+ +D + F Sbjct: 222 YDAVPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|220904015|ref|YP_002479327.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868314|gb|ACL48649.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 267 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 68/218 (31%), Positives = 121/218 (55%), Gaps = 7/218 (3%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 ++Q+Y +G +++LI G V+ QG + L QFG+ +S+ +RE+G +LT Sbjct: 50 MQQLYIIGSKSFFLIMLIGVFCGMVLGLQGYYTLVQFGSVGMLGSAVSLTLIRELGPVLT 109 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A+M+ GR+GS++ AEIG M+I ++IDA+ M ++ + L+SPR+ A +I+ PLLT + + Sbjct: 110 AIMLTGRAGSSMTAEIGVMRITDQIDALDVMDINSMGYLVSPRLVASLIAFPLLTAVFDV 169 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 IIG + I +F R S+ T+ ++ G IK+ + + ++G+ Sbjct: 170 IGIIGGYLTGVLMLGINEGAYFYRIASSVTMTDVAGGFIKSVVFGLLVTTICCRQGYYTN 229 Query: 337 VHSNSLGKK-----VTTCVVQSISIVIIIDSLFAIFYF 369 +S+G + T+ VV IS V+I+ + + I F Sbjct: 230 KRRDSVGPEAVGNATTSAVV--ISCVLILAADYVITSF 265 >gi|260779434|ref|ZP_05888325.1| uncharacterized ABC transporter permease component YrbE [Vibrio coralliilyticus ATCC BAA-450] gi|260604524|gb|EEX30824.1| uncharacterized ABC transporter permease component YrbE [Vibrio coralliilyticus ATCC BAA-450] Length = 263 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 118/216 (54%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y VGV + +++L G V++ QG L FGAE ++++ LRE+G ++ Sbjct: 47 LVKQLYSVGVQSLIIIVLSGLFIGMVLSLQGYVILVDFGAEGALGQMVALSLLRELGPVV 106 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D ++ +I+PR WA +IS+P+L ++ Sbjct: 107 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLKRVIAPRFWAGVISMPMLAMIFM 166 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G +V + I F+S ++ L +I +IK+ A + +A+ G+ Sbjct: 167 AVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSMIKSLVFAITVTWIALFNGYD 226 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV S V+ +D + F Sbjct: 227 AIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 262 >gi|254670842|emb|CBA07277.1| putative membrane protein [Neisseria meningitidis alpha153] gi|308390063|gb|ADO32383.1| putative ABC transport inner membrane subunit [Neisseria meningitidis alpha710] gi|309378880|emb|CBX22467.1| unnamed protein product [Neisseria lactamica Y92-1009] gi|319409726|emb|CBY90032.1| conserved hypothetical membrane protein [Neisseria meningitidis WUE 2594] gi|325127428|gb|EGC50359.1| putative membrane protein [Neisseria meningitidis N1568] gi|325137489|gb|EGC60074.1| putative membrane protein [Neisseria meningitidis ES14902] Length = 258 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 67/215 (31%), Positives = 120/215 (55%), Gaps = 3/215 (1%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215 +RQ+Y+ GV V +V + G V+ QG QLS+F A+I + + L LRE+G +L Sbjct: 43 VRQVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASL-LRELGPVL 101 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ A +G A+ +EIG MK E+++A+ M ++ V +++PR WA + S+PLL + N Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFN 161 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 + I GA +V + + +F+S+ + T+ ++ GLIK+ A+ ++A+ +GF Sbjct: 162 VAGIFGAYLVGVSWLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFH 221 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 S + + T VV S ++ +D + + F Sbjct: 222 CVPTSEGILRASTRTVVSSALTILAVDFILTAWMF 256 >gi|15677795|ref|NP_274959.1| hypothetical protein NMB1965 [Neisseria meningitidis MC58] gi|218767464|ref|YP_002341976.1| putative ABC transport inner membrane subunit [Neisseria meningitidis Z2491] gi|254804222|ref|YP_003082443.1| putative ABC transport system permease protein [Neisseria meningitidis alpha14] gi|296313905|ref|ZP_06863846.1| toluene tolerance ABC efflux transporter, permease [Neisseria polysaccharea ATCC 43768] gi|313669181|ref|YP_004049465.1| ABC transport inner membrane subunit [Neisseria lactamica ST-640] gi|7227225|gb|AAF42294.1| conserved hypothetical protein [Neisseria meningitidis MC58] gi|121051472|emb|CAM07765.1| putative ABC transport inner membrane subunit [Neisseria meningitidis Z2491] gi|254667764|emb|CBA03695.1| putative ABC transport system permease protein [Neisseria meningitidis alpha14] gi|254672981|emb|CBA07458.1| putative ABC transport system permease protein [Neisseria meningitidis alpha275] gi|261393293|emb|CAX50921.1| conserved hypothetical membrane protein [Neisseria meningitidis 8013] gi|296839439|gb|EFH23377.1| toluene tolerance ABC efflux transporter, permease [Neisseria polysaccharea ATCC 43768] gi|313006643|emb|CBN88109.1| putative ABC transport inner membrane subunit [Neisseria lactamica 020-06] gi|316985593|gb|EFV64540.1| toluene tolerance protein Ttg2B [Neisseria meningitidis H44/76] gi|325129426|gb|EGC52257.1| putative membrane protein [Neisseria meningitidis OX99.30304] gi|325135556|gb|EGC58174.1| putative membrane protein [Neisseria meningitidis M0579] gi|325139615|gb|EGC62155.1| putative membrane protein [Neisseria meningitidis CU385] gi|325201013|gb|ADY96468.1| putative membrane protein [Neisseria meningitidis H44/76] gi|325201398|gb|ADY96852.1| putative membrane protein [Neisseria meningitidis M01-240149] gi|325204915|gb|ADZ00369.1| putative membrane protein [Neisseria meningitidis M01-240355] gi|325207379|gb|ADZ02831.1| putative membrane protein [Neisseria meningitidis NZ-05/33] Length = 258 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 67/215 (31%), Positives = 120/215 (55%), Gaps = 3/215 (1%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215 +RQ+Y+ GV V +V + G V+ QG QLS+F A+I + + L LRE+G +L Sbjct: 43 VRQVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASL-LRELGPVL 101 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ A +G A+ +EIG MK E+++A+ M ++ V +++PR WA + S+PLL + N Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFN 161 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 + I GA +V + + +F+S+ + T+ ++ GLIK+ A+ ++A+ +GF Sbjct: 162 VAGIFGAYLVGVTWLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFH 221 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 S + + T VV S ++ +D + + F Sbjct: 222 CVPTSEGILRASTRTVVSSALTILAVDFILTAWMF 256 >gi|229513445|ref|ZP_04402909.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae TMA 21] gi|229524502|ref|ZP_04413907.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae bv. albensis VL426] gi|261211081|ref|ZP_05925370.1| uncharacterized ABC transporter permease component YrbE [Vibrio sp. RC341] gi|229338083|gb|EEO03100.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae bv. albensis VL426] gi|229349322|gb|EEO14278.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae TMA 21] gi|260839582|gb|EEX66193.1| uncharacterized ABC transporter permease component YrbE [Vibrio sp. RC341] Length = 263 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 116/216 (53%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y +GV + ++I+ G V++ QG L +GAE ++++ LRE+G ++ Sbjct: 47 LVRQLYSIGVQSLAIIIVSGLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVV 106 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D ++ +I+PR WA +IS+PLL ++ Sbjct: 107 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFM 166 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G +V + I F+S ++ L +I IK A + +A+ G+ Sbjct: 167 AVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYD 226 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV S V+ +D + F Sbjct: 227 AIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 262 >gi|238789753|ref|ZP_04633535.1| hypothetical protein yfred0001_29030 [Yersinia frederiksenii ATCC 33641] gi|238722112|gb|EEQ13770.1| hypothetical protein yfred0001_29030 [Yersinia frederiksenii ATCC 33641] Length = 235 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 72/218 (33%), Positives = 118/218 (54%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y VGV + ++++ G V+ QG L+ + AE ++S+ LRE+G ++ Sbjct: 19 LLKQLYSVGVQSLLIIVVSGLFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVV 78 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E+I ++ M +D +R +++PR WA +IS+PLLT + Sbjct: 79 TALLFAGRAGSALTAEIGLMKATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFV 138 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 I G S+ V WK D F F+S S ++ LIK+ A + +A+ G Sbjct: 139 AVGIWGGSVVGVDWKGIDGGF--FWSAMQSAVEWRTDLLNCLIKSLVFAITVTWIALFNG 196 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV S V+ +D + F Sbjct: 197 YDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 234 >gi|254229285|ref|ZP_04922703.1| conserved hypothetical protein [Vibrio sp. Ex25] gi|262393183|ref|YP_003285037.1| ABC transporter permease component YrbE [Vibrio sp. Ex25] gi|151938209|gb|EDN57049.1| conserved hypothetical protein [Vibrio sp. Ex25] gi|262336777|gb|ACY50572.1| uncharacterized ABC transporter permease component YrbE [Vibrio sp. Ex25] Length = 263 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 72/232 (31%), Positives = 121/232 (52%), Gaps = 2/232 (0%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G K F L L++Q+Y VGV + ++++ G V++ QG L +GAE Sbjct: 32 GALFTKPQPLKSFPL-LVKQLYSVGVQSLAIIVVSGLFIGMVLSLQGYVVLVDYGAEGSL 90 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK E++ ++ M +D ++ +I+PR Sbjct: 91 GQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPR 150 Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAP 318 WA IS+PLL ++ I GA +V + + F+S S+ L +I +IK Sbjct: 151 FWAGAISMPLLAMIFMAVGIWGAQLVGVDWKGVDHGSFWSAMQSSVELGQDIGNSMIKCF 210 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 A + VA+ G+ S + + T VV S V+ +D + F Sbjct: 211 AFAITVTWVALFNGYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 262 >gi|77457091|ref|YP_346596.1| hypothetical protein Pfl01_0864 [Pseudomonas fluorescens Pf0-1] gi|77381094|gb|ABA72607.1| putative ABC transport system, membrane protein [Pseudomonas fluorescens Pf0-1] Length = 265 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 62/215 (28%), Positives = 123/215 (57%), Gaps = 1/215 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 ++Q++ VGV + ++++ G V+A QG LS +G+E ++++ LRE+G ++T Sbjct: 49 VKQLHSVGVMSLVIIVVSGIFIGMVLALQGFNILSSYGSEQAVGQMVALTLLRELGPVVT 108 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +I+PR+WA ISLP+L ++ + Sbjct: 109 ALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIIAPRLWAGFISLPVLAMIFSV 168 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAV 335 I G S V + + ++S ++ + ++ G+IK+ A + +A+ +G+ Sbjct: 169 VGIWGGSWVAVDWLGVYEGSYWSNMQNSVSFGDDVLNGIIKSAVFAFVVTWIAVFQGYDC 228 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 229 EPTSEGISRATTKTVVYASLAVLGLDFILTALMFG 263 >gi|121727423|ref|ZP_01680551.1| conserved hypothetical protein [Vibrio cholerae V52] gi|229507423|ref|ZP_04396928.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae BX 330286] gi|229509652|ref|ZP_04399133.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae B33] gi|229516777|ref|ZP_04406223.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae RC9] gi|229606930|ref|YP_002877578.1| ABC transporter permease [Vibrio cholerae MJ-1236] gi|254851063|ref|ZP_05240413.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255744503|ref|ZP_05418455.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholera CIRS 101] gi|262154673|ref|ZP_06028799.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae INDRE 91/1] gi|262167549|ref|ZP_06035254.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae RC27] gi|262191035|ref|ZP_06049244.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae CT 5369-93] gi|297581366|ref|ZP_06943289.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|298500651|ref|ZP_07010455.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|121630195|gb|EAX62595.1| conserved hypothetical protein [Vibrio cholerae V52] gi|229345840|gb|EEO10812.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae RC9] gi|229353126|gb|EEO18065.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae B33] gi|229354928|gb|EEO19849.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae BX 330286] gi|229369585|gb|ACQ60008.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae MJ-1236] gi|254846768|gb|EET25182.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255738028|gb|EET93421.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholera CIRS 101] gi|262024002|gb|EEY42698.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae RC27] gi|262030513|gb|EEY49151.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae INDRE 91/1] gi|262033098|gb|EEY51627.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae CT 5369-93] gi|297534204|gb|EFH73042.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297540820|gb|EFH76877.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|327485006|gb|AEA79413.1| Uncharacterized ABC transporter, permease component YrbE [Vibrio cholerae LMA3894-4] Length = 263 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 116/216 (53%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y +GV + ++I+ G V++ QG L +GAE ++++ LRE+G ++ Sbjct: 47 LVRQLYSIGVQSLAIIIVSGLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVV 106 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D ++ +I+PR WA +IS+PLL ++ Sbjct: 107 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFM 166 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G +V + I F+S ++ L +I IK A + +A+ G+ Sbjct: 167 AVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYD 226 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV S V+ +D + F Sbjct: 227 AIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 262 >gi|27364141|ref|NP_759669.1| ABC transporter permease YrbE [Vibrio vulnificus CMCP6] gi|320157526|ref|YP_004189905.1| ABC transporter permease YrbE [Vibrio vulnificus MO6-24/O] gi|27360259|gb|AAO09196.1| Uncharacterized ABC transporter, permease component YrbE [Vibrio vulnificus CMCP6] gi|319932838|gb|ADV87702.1| uncharacterized ABC transporter permease component YrbE [Vibrio vulnificus MO6-24/O] Length = 262 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 118/216 (54%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y VGV + ++++ G V++ QG L +GAE ++++ LRE+G ++ Sbjct: 46 LVKQIYNVGVQSLAIIVVSGLFIGMVLSLQGYVILVDYGAEGSLGQMVALSLLRELGPVV 105 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D ++ +I+PR+WA IIS+PLL ++ Sbjct: 106 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLKRIIAPRLWAGIISMPLLAMIFM 165 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G +V + I F+S ++ L +I +IK A + +A+ G+ Sbjct: 166 AVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSMIKCVVFAITVTWIALFNGYD 225 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV S V+ +D + F Sbjct: 226 AIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 261 >gi|37678640|ref|NP_933249.1| ABC-type transport system, permease component [Vibrio vulnificus YJ016] gi|37197380|dbj|BAC93220.1| ABC-type transport system, permease component [Vibrio vulnificus YJ016] Length = 262 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 118/216 (54%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y VGV + ++++ G V++ QG L +GAE ++++ LRE+G ++ Sbjct: 46 LVKQIYNVGVQSLAIIVVSGLFIGMVLSLQGYVILVDYGAEGSLGQMVALSLLRELGPVV 105 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D ++ +I+PR+WA IIS+PLL ++ Sbjct: 106 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLKRIIAPRLWAGIISMPLLAMIFM 165 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G +V + I F+S ++ L +I +IK A + +A+ G+ Sbjct: 166 AVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSMIKCVVFAITVTWIALFNGYD 225 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV S V+ +D + F Sbjct: 226 AIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 261 >gi|320538922|ref|ZP_08038598.1| putative phospholipid transporter subunit: membrane component of ABC superfamily [Serratia symbiotica str. Tucson] gi|320031082|gb|EFW13085.1| putative phospholipid transporter subunit: membrane component of ABC superfamily [Serratia symbiotica str. Tucson] Length = 260 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 73/219 (33%), Positives = 120/219 (54%), Gaps = 7/219 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 L++QMY +GV + ++++ G V+ QG L+ + AE S+ +M L L RE+G + Sbjct: 44 LLKQMYSIGVQSLLIIMVSGLFIGMVLGLQGYIVLTTYSAEA-SLGMMVALSLLRELGPV 102 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGR+GSA+ AEIG MK E+I ++ M +D +R +++PR WA +ISLPLLTI+ Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLRRIVAPRFWAGLISLPLLTIIF 162 Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331 ++G +I V WK D F F+S ++ L+K+ A + +A+ Sbjct: 163 VALGMLGGAIVGVDWKGIDSGF--FWSAMQGAVEWKKDLLNCLLKSVVFAITVTWIAIFN 220 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+ S + + T VV S V+ +D + F Sbjct: 221 GYDAVPTSTGISQATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|161869245|ref|YP_001598412.1| putative ABC transport system permease protein [Neisseria meningitidis 053442] gi|304388521|ref|ZP_07370624.1| ABC superfamily ATP binding cassette transporter, membrane protein [Neisseria meningitidis ATCC 13091] gi|161594798|gb|ABX72458.1| putative ABC transport system permease protein [Neisseria meningitidis 053442] gi|304337518|gb|EFM03684.1| ABC superfamily ATP binding cassette transporter, membrane protein [Neisseria meningitidis ATCC 13091] Length = 258 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 67/215 (31%), Positives = 120/215 (55%), Gaps = 3/215 (1%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215 +RQ+Y+ GV V +V + G V+ QG QLS+F A+I + + L LRE+G +L Sbjct: 43 VRQVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASL-LRELGPVL 101 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ A +G A+ +EIG MK E+++A+ M ++ V +++PR WA + S+PLL + N Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFN 161 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 + I GA +V + + +F+S+ + T+ ++ GLIK+ A+ ++A+ +GF Sbjct: 162 VAGIFGAYLVGVTWLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFH 221 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 S + + T VV S ++ +D + + F Sbjct: 222 CVPTSEGILRASTRTVVSSALTILAVDFILTAWMF 256 >gi|188532480|ref|YP_001906277.1| ABC transporter, permease subunit, probable toluene tolerance protein [Erwinia tasmaniensis Et1/99] gi|188027522|emb|CAO95369.1| ABC transporter, permease subunit, probable toluene tolerance protein [Erwinia tasmaniensis Et1/99] Length = 260 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 74/227 (32%), Positives = 122/227 (53%), Gaps = 7/227 (3%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 +F+ L++Q+Y +GV + +V++ G V+ QG L + AE S+ +M L Sbjct: 36 RFRKHAPLLVKQLYSIGVLSLLIVVVSGLFIGMVLGLQGYLVLKTYSAET-SLGMMVALS 94 Query: 208 L-REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 L RE+G ++TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +ISPR WA IS Sbjct: 95 LLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRIISPRFWAGFIS 154 Query: 267 LPLLTILANFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACA 323 +PLLT++ I+G ++ V WK D F F+S + L +I IK+ A Sbjct: 155 MPLLTLIFVAVGILGGALVGVSWKGIDPGF--FWSAMQNAVDLRTDIINCTIKSAVFALT 212 Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +A+ G+ S + + T VV + V+ +D + F Sbjct: 213 VTWIALFNGYDAIPTSEGISRATTRTVVHASLAVLGLDFVLTALMFG 259 >gi|146305912|ref|YP_001186377.1| hypothetical protein Pmen_0877 [Pseudomonas mendocina ymp] gi|145574113|gb|ABP83645.1| protein of unknown function DUF140 [Pseudomonas mendocina ymp] Length = 265 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 63/216 (29%), Positives = 124/216 (57%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q++ VGV + ++++ G V+A QG L +G+E ++++ LRE+G ++ Sbjct: 48 LIKQLFAVGVMSLAIIVVSGIFIGMVLALQGYNILVSYGSEQAVGQMVALTLLRELGPVV 107 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +I+PR+WA IS+PLL ++ + Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIIAPRLWAGFISMPLLAMIFS 167 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334 I G ++V + + F+S ++ + ++ G+IK+ A + +A+ +G+ Sbjct: 168 VVGIWGGAMVAVDWLGVYEGSFWSNMQNSVSFYDDVLNGVIKSIVFAFVVTWIAVFQGYD 227 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 228 CEPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 263 >gi|15642515|ref|NP_232148.1| hypothetical protein VC2519 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121591413|ref|ZP_01678693.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|147675288|ref|YP_001218017.1| hypothetical protein VC0395_A2101 [Vibrio cholerae O395] gi|153215706|ref|ZP_01950087.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|153801107|ref|ZP_01955693.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|153818001|ref|ZP_01970668.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|153822409|ref|ZP_01975076.1| conserved hypothetical protein [Vibrio cholerae B33] gi|153825790|ref|ZP_01978457.1| conserved hypothetical protein [Vibrio cholerae MZO-2] gi|153829794|ref|ZP_01982461.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|227082638|ref|YP_002811189.1| hypothetical protein VCM66_2441 [Vibrio cholerae M66-2] gi|254225914|ref|ZP_04919516.1| conserved hypothetical protein [Vibrio cholerae V51] gi|254291437|ref|ZP_04962229.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|9657102|gb|AAF95661.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121546729|gb|EAX56904.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|124114624|gb|EAY33444.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|124123340|gb|EAY42083.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|125621540|gb|EAZ49872.1| conserved hypothetical protein [Vibrio cholerae V51] gi|126511436|gb|EAZ74030.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|126520052|gb|EAZ77275.1| conserved hypothetical protein [Vibrio cholerae B33] gi|146317171|gb|ABQ21710.1| conserved hypothetical protein [Vibrio cholerae O395] gi|148874712|gb|EDL72847.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|149740513|gb|EDM54628.1| conserved hypothetical protein [Vibrio cholerae MZO-2] gi|150422627|gb|EDN14582.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|227010526|gb|ACP06738.1| conserved hypothetical protein [Vibrio cholerae M66-2] gi|227014409|gb|ACP10619.1| conserved hypothetical protein [Vibrio cholerae O395] Length = 258 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 116/216 (53%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y +GV + ++I+ G V++ QG L +GAE ++++ LRE+G ++ Sbjct: 42 LVRQLYSIGVQSLAIIIVSGLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVV 101 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D ++ +I+PR WA +IS+PLL ++ Sbjct: 102 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFM 161 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G +V + I F+S ++ L +I IK A + +A+ G+ Sbjct: 162 AVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYD 221 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV S V+ +D + F Sbjct: 222 AIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 257 >gi|296122312|ref|YP_003630090.1| hypothetical protein Plim_2064 [Planctomyces limnophilus DSM 3776] gi|296014652|gb|ADG67891.1| protein of unknown function DUF140 [Planctomyces limnophilus DSM 3776] Length = 260 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 116/208 (55%) Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 Y +G +PV+++ G V+A Q QL+ G + ++++ ++E+G +L A M+ Sbjct: 38 YEIGCRSMPVILITGGFIGMVLAVQSFDQLAAIGLQSRLGSVVNVSLVKELGPVLAATML 97 Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280 AGR GSA+ AEIG+MK+ E+IDA++ +G + V L+ PR A ++ +P LT+LA+ ++ Sbjct: 98 AGRVGSAMAAEIGTMKVTEQIDALQALGANPVMFLVCPRFLACVLLIPALTLLADGIGML 157 Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 + + I +++ S T +I +G+IK+ F AI +VA GF + Sbjct: 158 SGWYLSVQVLGISSHLYWFYSDSYITSLDIISGVIKSIFFGGAIALVACHRGFHCSSGAE 217 Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFY 368 +G+ T V S +V+ +D L +F+ Sbjct: 218 GVGRAATEAFVCSFILVLAMDFLLGVFF 245 >gi|329120837|ref|ZP_08249497.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Neisseria bacilliformis ATCC BAA-1200] gi|327459709|gb|EGF06050.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Neisseria bacilliformis ATCC BAA-1200] Length = 258 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 119/215 (55%), Gaps = 3/215 (1%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215 +RQ+Y+ GV V ++ + G V+ QG QL++F A+I + + L LRE+G +L Sbjct: 43 VRQVYFAGVLSVLIIAVSGLFVGMVLGLQGYTQLAKFKSADILGYMVAASL-LRELGPVL 101 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ A +G A+ +EIG MK E+++A+ M ++ V +++PR WA + S+PLL + N Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFN 161 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 + I GA +V ++ + +F+S+ + ++ GLIK+ A+ ++A+ +GF Sbjct: 162 VAGIYGAYLVGVEWLGLDGGIFWSQMQNNIAFGYDVLNGLIKSACFGVAVTLIAVHQGFH 221 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 S + + T VV S V+ +D + F F Sbjct: 222 CVPTSEGILRASTRTVVSSALTVLAVDFILTAFMF 256 >gi|218782260|ref|YP_002433578.1| hypothetical protein Dalk_4431 [Desulfatibacillum alkenivorans AK-01] gi|218763644|gb|ACL06110.1| protein of unknown function DUF140 [Desulfatibacillum alkenivorans AK-01] Length = 268 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 71/218 (32%), Positives = 119/218 (54%), Gaps = 7/218 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE-IFSIDLMSILQLREIGVL 214 ++ Q+ +G + VV LI TG V+ Q L+ FG+E + ++ L ++E+G + Sbjct: 50 ILTQINIIGAQSLYVVSLIGLFTGMVLGLQLYNALANFGSEGMLGTSIVHTL-IKEMGPV 108 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 L A+M+ R+GSA+ AEIG M+I+EEIDA+ TM ++ +R L+SPR+ A IIS PLLT L Sbjct: 109 LAAIMVTARAGSAMAAEIGIMRISEEIDALDTMQINPIRFLVSPRLAAAIISFPLLTALF 168 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 + A+ G + K + A ++ ++ + +I G +KA A + V +G+ Sbjct: 169 DVIALFGGYLTGCKLKGLNDATYWYTVENSLVMEDINGGFLKAIVFAVIVITVCCYQGYT 228 Query: 335 VGVHSNSLGKK-----VTTCVVQSISIVIIIDSLFAIF 367 + N G K T+ VV S ++++ D + F Sbjct: 229 THMRPNGFGAKGVSASTTSAVVMSCVLILMADFVLTAF 266 >gi|212702437|ref|ZP_03310565.1| hypothetical protein DESPIG_00454 [Desulfovibrio piger ATCC 29098] gi|212674098|gb|EEB34581.1| hypothetical protein DESPIG_00454 [Desulfovibrio piger ATCC 29098] Length = 375 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 64/198 (32%), Positives = 110/198 (55%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + MY GV +P++ + S + G ++A GA QL+QFGA+I+ L+ I LR +G ++ Sbjct: 159 VEAMYECGVRALPIISITSLLFGLILAFVGAVQLTQFGAQIYVAGLVGIGMLRVMGAVMV 218 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 V+++GR G+A A IG+M++NEE+DA+ T+G+ + L+ PR+ AL+ +PLLT+ A+ Sbjct: 219 GVVMSGRVGAAYAAMIGTMQVNEEVDALTTLGISPIDFLVLPRMLALMFMVPLLTVYADL 278 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 I+G +V + A + + + + G+ I + +G G Sbjct: 279 MGILGGYVVGVSMLGLSSAEYLNATMQMVSFVHGLIGIAYGTVFGVIIALAGCYQGIRCG 338 Query: 337 VHSNSLGKKVTTCVVQSI 354 + ++G TT VVQSI Sbjct: 339 RSAQAVGLATTTAVVQSI 356 >gi|320103291|ref|YP_004178882.1| hypothetical protein Isop_1750 [Isosphaera pallida ATCC 43644] gi|319750573|gb|ADV62333.1| protein of unknown function DUF140 [Isosphaera pallida ATCC 43644] Length = 280 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 61/217 (28%), Positives = 114/217 (52%), Gaps = 5/217 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+ + +GV +PVV + G V++ Q + G E +++I ++E+G +L Sbjct: 53 LVPNFFTIGVRSLPVVAVTGLFIGMVLSVQSFNSFKEMGLETRLGSVVNISLVKELGPVL 112 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A M+AGR GSA+ AE+G+M++ E+IDA+ +G++ + L+ PR A ++ +P LT++A+ Sbjct: 113 AATMLAGRVGSAMAAELGTMRVTEQIDALHALGVNPIAYLVVPRFLACVVLIPALTLVAD 172 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 F+ +G S V K + ++ S ++ GL K+ F AI +++ GF Sbjct: 173 FAGALGGSFVSVKMLGVDGYYYWKHSQSFVEPLDVVAGLFKSVFFGAAIALISCHRGFHS 232 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 + +G+ T V S ++ +D F+ +G Sbjct: 233 KGGAEGVGQAATEAFVSSFIAILFLD-----FWLGLG 264 >gi|291615986|ref|YP_003518728.1| YrbE [Pantoea ananatis LMG 20103] gi|291151016|gb|ADD75600.1| YrbE [Pantoea ananatis LMG 20103] gi|327396238|dbj|BAK13660.1| inner membrane protein YrbE [Pantoea ananatis AJ13355] Length = 260 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 68/218 (31%), Positives = 119/218 (54%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q+Y +GV + ++++ G V+ QG L+ +GAE L+++ LRE+G ++ Sbjct: 44 LIKQLYSIGVLSLVIIVVSGLFIGMVLGLQGYLVLTTYGAETSLGMLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R ++SPR WA IS+PLL ++ Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVVSPRFWAGFISMPLLALIFT 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 I G ++ V WK D F F+S + +++ +IK+ A + +A+ G Sbjct: 164 AVGITGGALVGVSWKGIDPGF--FWSAMQNAVDFRSDVVNCIIKSAVFAVTVTWIALFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV + V+ +D + F Sbjct: 222 YDAIPTSEGISRATTRTVVHASLAVLGLDFVLTALMFG 259 >gi|156935718|ref|YP_001439634.1| hypothetical protein ESA_03587 [Cronobacter sakazakii ATCC BAA-894] gi|156533972|gb|ABU78798.1| hypothetical protein ESA_03587 [Cronobacter sakazakii ATCC BAA-894] Length = 260 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 83/265 (31%), Positives = 138/265 (52%), Gaps = 12/265 (4%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 NL +G++ +KF + S +A GL++ N +F+ L+RQ+Y VGV + Sbjct: 4 NLLASMGQRGLKF-SASFGRA---GLMLFNA---IVGKPEFRKHGPLLVRQLYNVGVLSM 56 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++I+ G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ Sbjct: 57 IIIIVSGLFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSAL 116 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI--VI 286 AEIG MK E++ ++ M +D +R +ISPR WA +ISLPLLT++ + G S+ V Sbjct: 117 TAEIGLMKATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGVWGGSLVGVN 176 Query: 287 WKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 WK D F F+S ++ LIK+ A + +A+ G+ S + + Sbjct: 177 WKGIDAGF--FWSAMQDAVDWRMDLINCLIKSVVFAITVTWIALFNGYDAIPTSAGISRA 234 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + V+ +D + F Sbjct: 235 TTRTVVHASLAVLGLDFVLTALMFG 259 >gi|171463508|ref|YP_001797621.1| protein of unknown function DUF140 [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193046|gb|ACB44007.1| protein of unknown function DUF140 [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 216 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 69/209 (33%), Positives = 115/209 (55%), Gaps = 5/209 (2%) Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G SG+ L S + G +++ Q A + QFGA F L ++ +RE+G ++TA+++AGR Sbjct: 12 GHSGIADRWLGSLLIGVILSFQAAIGMQQFGAVSFVGPLAALDIVREMGPIITAILLAGR 71 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 S +A EIG+M +N E+DA+ + G L+ RI A I+ P+LT+ A+ +I +S Sbjct: 72 SSAAFAVEIGTMTVNSEVDALVSGG----YFLVVSRILAGILVAPILTLFADIVSIF-SS 126 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 ++ Y IPF F++ S + +I +GL+KA I + G G + ++G Sbjct: 127 MLTMLIYGIPFVNFYNGMLSAVDVEDILSGLLKATLFGVVISAMGCLRGMQTGTGAAAVG 186 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 T VV SI +++I+D +FA + G Sbjct: 187 ISATRAVVSSIVMIVIVDGIFAFISYKTG 215 >gi|270263239|ref|ZP_06191509.1| hypothetical protein SOD_d02560 [Serratia odorifera 4Rx13] gi|270042927|gb|EFA16021.1| hypothetical protein SOD_d02560 [Serratia odorifera 4Rx13] Length = 260 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 74/219 (33%), Positives = 119/219 (54%), Gaps = 7/219 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 L++QM+ VGV + ++++ G V+ QG L+ + AE S+ +M L L RE+G + Sbjct: 44 LLKQMHSVGVQSLLIIMVSGLFIGMVLGLQGYLVLTTYSAEA-SLGMMVALSLLRELGPV 102 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGR+GSA+ AEIG MK E+I ++ M +D +R +++PR WA +IS+PLLTI+ Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLRRIVAPRFWAGLISMPLLTIIF 162 Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331 I G SI V WK D F F+S ++ L+K+ A + +A+ Sbjct: 163 VAVGIWGGSIVGVDWKGIDSGF--FWSAMQGAVEWRKDLLNCLLKSVVFAITVTWIAIFN 220 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+ S + + T VV S V+ +D + F Sbjct: 221 GYDAVPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|255067843|ref|ZP_05319698.1| toluene tolerance ABC efflux transporter, permease [Neisseria sicca ATCC 29256] gi|255047934|gb|EET43398.1| toluene tolerance ABC efflux transporter, permease [Neisseria sicca ATCC 29256] Length = 258 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 68/215 (31%), Positives = 119/215 (55%), Gaps = 3/215 (1%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215 +RQ+Y+ GV V +V + G V+ QG QLS+F A+I + + L LRE+G +L Sbjct: 43 VRQVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASL-LRELGPVL 101 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ A +G A+ +EIG MK E+++A+ M ++ V +++PR WA + S+PLL + N Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFN 161 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 + I GA +V + + +F+S+ + T+ ++ GLIK+ A+ ++A+ +GF Sbjct: 162 VAGIYGAYLVGVTWLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFH 221 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 S + + T VV S ++ ID + F Sbjct: 222 CVPTSEGILRASTRTVVSSALTILAIDFVLTALMF 256 >gi|261364829|ref|ZP_05977712.1| toluene tolerance ABC efflux transporter, permease [Neisseria mucosa ATCC 25996] gi|288566867|gb|EFC88427.1| toluene tolerance ABC efflux transporter, permease [Neisseria mucosa ATCC 25996] Length = 258 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 68/215 (31%), Positives = 119/215 (55%), Gaps = 3/215 (1%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215 +RQ+Y+ GV V +V + G V+ QG QLS+F A+I + + L LRE+G +L Sbjct: 43 VRQVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASL-LRELGPVL 101 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ A +G A+ +EIG MK E+++A+ M ++ V +++PR WA + S+PLL + N Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFN 161 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 + I GA +V + + +F+S+ + T+ ++ GLIK+ A+ ++A+ +GF Sbjct: 162 VAGIYGAYLVGVTWLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFH 221 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 S + + T VV S ++ ID + F Sbjct: 222 CVPTSEGILRASTRTVVSSALTILAIDFVLTALMF 256 >gi|229521585|ref|ZP_04411003.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae TM 11079-80] gi|229341179|gb|EEO06183.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae TM 11079-80] Length = 263 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 66/216 (30%), Positives = 116/216 (53%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y +GV + ++I+ G V++ QG L +GAE ++++ LRE+G ++ Sbjct: 47 LVRQLYSIGVQSLAIIIVSGLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVV 106 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D ++ +I+PR WA +IS+PLL ++ Sbjct: 107 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFM 166 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 + G +V + I F+S ++ L +I IK A + +A+ G+ Sbjct: 167 AVGVWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYD 226 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV S V+ +D + F Sbjct: 227 AIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 262 >gi|308814916|dbj|BAJ22980.1| L-glutamate ABC transporter [Neisseria meningitidis] Length = 258 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 67/215 (31%), Positives = 120/215 (55%), Gaps = 3/215 (1%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215 +RQ+Y+ GV V +V + G V+ QG QLS+F A+I + + L LRE+G +L Sbjct: 43 VRQVYFAGVLSVLIVAVSGMFVGIVLGLQGYTQLSKFKSADILGYMVAASL-LRELGPVL 101 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ A +G A+ +EIG MK E+++A+ M ++ V +++PR WA + S+PLL + N Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFN 161 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 + I GA +V + + +F+S+ + T+ ++ GLIK+ A+ ++A+ +GF Sbjct: 162 VAGIFGAYLVGVSWLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFH 221 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 S + + T VV S ++ +D + + F Sbjct: 222 CVPTSEGILRASTRTVVSSALTILAVDFILTAWMF 256 >gi|325266930|ref|ZP_08133601.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Kingella denitrificans ATCC 33394] gi|324981671|gb|EGC17312.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Kingella denitrificans ATCC 33394] Length = 257 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 119/215 (55%), Gaps = 3/215 (1%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215 +RQMY+ GV V ++ + G VI QG QL++F A++ + + L LRE+G +L Sbjct: 43 VRQMYFSGVMSVLIIAVSGLFVGMVIGLQGYTQLAKFKSADVLGFMVAASL-LRELGPVL 101 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ A +G A+ +EIG MK E+++A+ M ++ V +++PR WA ++S+PLL + N Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVLSMPLLACIFN 161 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 + I G +V ++ + VF+S + + ++ GL+K+ A+ ++A+ +GF Sbjct: 162 VAGIYGGYLVGVQWLGLDSGVFWSNMQNNIDVVYDVGNGLLKSLIFGTAVSLIAVYQGFH 221 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + + + T VV S V+ +D + F F Sbjct: 222 CTPTAEGILRASTRTVVSSALTVLALDFILTAFMF 256 >gi|312888063|ref|ZP_07747647.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM 18603] gi|311299544|gb|EFQ76629.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM 18603] Length = 256 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 70/225 (31%), Positives = 120/225 (53%) Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198 TG F + K + + L+ Q Y +G P+V L F+ G V+ Q L +G + Sbjct: 21 TGHFFSRGIKPRFEIKELLAQCYLIGYKSFPLVGLTGFIMGLVLTMQLRPSLVVYGVQSE 80 Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258 ++ I +REIG ++TA++ AG+ GS+I AE+GSMK+ E+IDA+ G + + L++ Sbjct: 81 LPVMVGIAIVREIGPVITALIFAGKIGSSIGAELGSMKVTEQIDAMDVSGTNPFKYLVAT 140 Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318 R+ A + LP+LT+L + ++ GA I + FF++ + T ++I +IK Sbjct: 141 RVVATTLMLPVLTLLGDAISLFGAYIGVNINAVTSVRFFFTQVFQSLTYSDIVPAIIKTL 200 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 F A+GI+ +GF + +G + VV S ++ +ID L Sbjct: 201 FFGFAVGIIGCYKGFNSTKGTQGVGNSANSAVVLSSVVIFVIDLL 245 >gi|262401810|ref|ZP_06078375.1| uncharacterized ABC transporter permease component YrbE [Vibrio sp. RC586] gi|262351782|gb|EEZ00913.1| uncharacterized ABC transporter permease component YrbE [Vibrio sp. RC586] Length = 263 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 69/232 (29%), Positives = 120/232 (51%), Gaps = 2/232 (0%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G + F L L+RQ+Y +GV + ++++ G V++ QG L +GAE Sbjct: 32 GALVGRPQPIRNFPL-LVRQLYSIGVQSLAIIMVSGLFIGMVLSLQGYVILVDYGAETSL 90 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK E++ ++ M +D ++ +I+PR Sbjct: 91 GQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPR 150 Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAP 318 WA +IS+PLL ++ I G +V + I F+S ++ L +I IK Sbjct: 151 FWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCV 210 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 A + +A+ G+ S + + T VV S V+ +D + F Sbjct: 211 VFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 262 >gi|332172346|gb|AEE21600.1| protein of unknown function DUF140 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 259 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 69/216 (31%), Positives = 121/216 (56%), Gaps = 1/216 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I+Q+Y VGV + ++++ G V+A QG L +GAE ++++ LRE+G ++T Sbjct: 43 IKQIYVVGVQSLLIIVVSGLFIGMVMALQGYTILVGYGAEGSLGPMVALSLLRELGPVVT 102 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+GSA+ AEIG MK E++ ++ M +D +R +++PR+WA IIS+P+L I+ + Sbjct: 103 ALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRIVAPRLWAGIISMPMLAIIFSA 162 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I+G +V + + ++S S+ ++ G+IK A I +A+ +G+ Sbjct: 163 VGILGGHVVGVDWLGVDAGSYWSIMQSSVDWNEDVVNGIIKTFVFAFVITWIAIFKGYDA 222 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 S + K T VV S V+ +D + F I Sbjct: 223 IPTSEGISKATTETVVFSSLAVLGLDFILTALMFGI 258 >gi|283836259|ref|ZP_06356000.1| toluene tolerance ABC efflux transporter, permease [Citrobacter youngae ATCC 29220] gi|291067623|gb|EFE05732.1| toluene tolerance ABC efflux transporter, permease [Citrobacter youngae ATCC 29220] Length = 260 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 74/218 (33%), Positives = 118/218 (54%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LIRQ+Y VGV + ++I+ G V+ QG L+ + AE L+++ LRE+G ++ Sbjct: 44 LIRQLYNVGVLSMLIIIVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ AGR+GSA+ AEIG M+ E++ ++ M +D +R +ISPR WA +ISLPLLTI+ Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSLEMMAVDPLRRVISPRFWAGVISLPLLTIIFV 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEG 332 I G S+ V WK D F F+S + ++ LIK+ A + +A+ G Sbjct: 164 AVGIWGGSLVGVSWKGIDAGF--FWSAMQNAVDWRLDLVNCLIKSVVFAITVTWIALFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV + V+ +D + F Sbjct: 222 YDAIPTSAGISRATTRTVVHASLAVLGLDFVLTALMFG 259 >gi|238793703|ref|ZP_04637325.1| hypothetical protein yinte0001_800 [Yersinia intermedia ATCC 29909] gi|238726944|gb|EEQ18476.1| hypothetical protein yinte0001_800 [Yersinia intermedia ATCC 29909] Length = 260 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 71/218 (32%), Positives = 118/218 (54%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y VGV + ++++ G V+ QG L+ + AE ++S+ LRE+G ++ Sbjct: 44 LVKQLYSVGVQSLLIIVVSGLFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E+I ++ M +D +R +++PR WA +IS+PLLT + Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFV 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 I G S+ V WK D F F+S + ++ LIK+ A + +A+ G Sbjct: 164 AVGIWGGSVVGVDWKGIDGGF--FWSAMQNAVEWRTDLLNCLIKSLVFAITVTWIALFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV S V+ +D + F Sbjct: 222 YDAVPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|237730114|ref|ZP_04560595.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226908720|gb|EEH94638.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 260 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 74/218 (33%), Positives = 118/218 (54%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LIRQ+Y VGV + ++I+ G V+ QG L+ + AE L+++ LRE+G ++ Sbjct: 44 LIRQLYNVGVLSMLIIIVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ AGR+GSA+ AEIG M+ E++ ++ M +D +R +ISPR WA +ISLPLLTI+ Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSLEMMAVDPLRRVISPRFWAGVISLPLLTIIFV 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEG 332 I G S+ V WK D F F+S + ++ LIK+ A + +A+ G Sbjct: 164 AVGIWGGSLVGVSWKGIDAGF--FWSAMQNAVDWRLDLVNCLIKSVVFAITVTWIALFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV + V+ +D + F Sbjct: 222 YDAIPTSAGISRATTRTVVHASLAVLGLDFVLTALMFG 259 >gi|118594041|ref|ZP_01551388.1| hypothetical protein MB2181_00195 [Methylophilales bacterium HTCC2181] gi|118439819|gb|EAV46446.1| hypothetical protein MB2181_00195 [Methylophilales bacterium HTCC2181] Length = 261 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 67/214 (31%), Positives = 118/214 (55%), Gaps = 1/214 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 IR++Y+ GV + ++I+ +F G V+ QG + L ++G+ L+++ +RE+G ++T Sbjct: 47 IREIYFTGVLSLVIIIVSAFFVGMVLGLQGYYTLEKYGSSEAIGVLVALALVRELGPVVT 106 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+G+AI AEIG MK E++ A+ M + V +I+PR WA +IS+P+L + + Sbjct: 107 ALLFAGRAGTAITAEIGLMKATEQLSAMEVMAVSPVARIIAPRFWAGMISMPILATIFSM 166 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFAV 335 I+G + + F+S+ + +N I G IK+ A I+A+ EGF Sbjct: 167 VGILGGYFIAVLVIGVDEGAFWSQMQANVDFSNDIVDGAIKSIVFGFACTIIALFEGFDA 226 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + + + T VV S V+ +D + F F Sbjct: 227 PPTAEGVSRATTRTVVISSLAVLGLDFILTSFMF 260 >gi|294086102|ref|YP_003552862.1| hypothetical protein SAR116_2535 [Candidatus Puniceispirillum marinum IMCC1322] gi|292665677|gb|ADE40778.1| Protein of unknown function DUF140 [Candidatus Puniceispirillum marinum IMCC1322] Length = 266 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 67/203 (33%), Positives = 119/203 (58%) Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G+ +PVVIL++ G +++ QG L FGAE +++ RE L+T +++AGR Sbjct: 62 GIDALPVVILMAATIGIMLSIQGVHSLRIFGAESQVTFGLALSIPREFAPLITGIIVAGR 121 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 SGS + + +GSM++N E+DA++ MG+ +R +++P + AL+ +LP+L +AN SA AS Sbjct: 122 SGSQLTSRVGSMQLNGELDALKVMGISPIRFVVAPALVALLFALPILVAIANVSAFWTAS 181 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 + I I A +++ + T+ ++ G KA A I ++ + +G V ++ LG Sbjct: 182 LYIDAVLGIAPAAYWADILAVVTITDLIHGFGKAIIFAVLIALIGICKGLRVSGGADRLG 241 Query: 344 KKVTTCVVQSISIVIIIDSLFAI 366 T+ VV I+ +I D++FA+ Sbjct: 242 AATTSSVVSCIAAIIAADAMFAL 264 >gi|262170539|ref|ZP_06038217.1| uncharacterized ABC transporter permease component YrbE [Vibrio mimicus MB-451] gi|261891615|gb|EEY37601.1| uncharacterized ABC transporter permease component YrbE [Vibrio mimicus MB-451] Length = 263 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 69/232 (29%), Positives = 120/232 (51%), Gaps = 2/232 (0%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G + F L L+RQ+Y +GV + ++++ G V++ QG L +GAE Sbjct: 32 GALVGRPQPIRNFPL-LVRQLYSIGVQSLAIIMVSGLFIGMVLSLQGYVILVDYGAETSL 90 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK E++ ++ M +D ++ +I+PR Sbjct: 91 GQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPR 150 Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAP 318 WA +IS+PLL ++ I G +V + I F+S ++ L +I IK Sbjct: 151 FWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCV 210 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 A + +A+ G+ S + + T VV S V+ +D + F Sbjct: 211 VFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 262 >gi|258622787|ref|ZP_05717805.1| conserved hypothetical protein [Vibrio mimicus VM573] gi|258625813|ref|ZP_05720692.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|262166549|ref|ZP_06034286.1| uncharacterized ABC transporter permease component YrbE [Vibrio mimicus VM223] gi|258582051|gb|EEW06921.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|258584975|gb|EEW09706.1| conserved hypothetical protein [Vibrio mimicus VM573] gi|262026265|gb|EEY44933.1| uncharacterized ABC transporter permease component YrbE [Vibrio mimicus VM223] Length = 258 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 69/232 (29%), Positives = 120/232 (51%), Gaps = 2/232 (0%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G + F L L+RQ+Y +GV + ++++ G V++ QG L +GAE Sbjct: 27 GALVGRPQPIRNFPL-LVRQLYSIGVQSLAIIMVSGLFIGMVLSLQGYVILVDYGAETSL 85 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK E++ ++ M +D ++ +I+PR Sbjct: 86 GQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPR 145 Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAP 318 WA +IS+PLL ++ I G +V + I F+S ++ L +I IK Sbjct: 146 FWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCV 205 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 A + +A+ G+ S + + T VV S V+ +D + F Sbjct: 206 VFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 257 >gi|110639360|ref|YP_679569.1| ABC transporter permease [Cytophaga hutchinsonii ATCC 33406] gi|110282041|gb|ABG60227.1| ABC transporter, permease [Cytophaga hutchinsonii ATCC 33406] Length = 263 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 109/207 (52%) Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 L +I Q Y VG+ +P++ L FVTG V +Q L FGA + L+SI +R +G Sbjct: 42 LRQVIDQCYEVGIKSLPLITLTGFVTGLVFTKQSRPSLEVFGATSWLPSLISIALVRALG 101 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 L+TA++ AG+ GS+I AE+GSMK+ E+IDA+ ++ + L+ R+ A + +L+ Sbjct: 102 PLVTALICAGKVGSSIGAELGSMKVTEQIDAMEVSAINPFKYLVVTRVLATTFMVSILSF 161 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 + ++GA + + FA FF S +IF+ + K+ IGIV +G Sbjct: 162 YCSLVGLLGAFVNVHANDTTSFANFFQSGFSDINFIDIFSSVTKSLVFGFTIGIVGCYKG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVII 359 F + +GK VV ++ ++ + Sbjct: 222 FNATQGTRGVGKAANQAVVTAMFLIFV 248 >gi|238785100|ref|ZP_04629095.1| hypothetical protein yberc0001_210 [Yersinia bercovieri ATCC 43970] gi|238796191|ref|ZP_04639701.1| hypothetical protein ymoll0001_34470 [Yersinia mollaretii ATCC 43969] gi|238713992|gb|EEQ06009.1| hypothetical protein yberc0001_210 [Yersinia bercovieri ATCC 43970] gi|238719884|gb|EEQ11690.1| hypothetical protein ymoll0001_34470 [Yersinia mollaretii ATCC 43969] Length = 260 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 71/218 (32%), Positives = 118/218 (54%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y VGV + ++++ G V+ QG L+ + AE ++S+ LRE+G ++ Sbjct: 44 LVKQLYSVGVQSLLIIVVSGLFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E+I ++ M +D +R +++PR WA +IS+PLLT + Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFV 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 I G S+ V WK D F F+S + ++ LIK+ A + +A+ G Sbjct: 164 AVGIWGGSVVGVDWKGIDGGF--FWSAMQNAVEWRTDLLNCLIKSLVFAITVTWIALFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV S V+ +D + F Sbjct: 222 YDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|323498697|ref|ZP_08103687.1| hypothetical protein VISI1226_21911 [Vibrio sinaloensis DSM 21326] gi|323316253|gb|EGA69274.1| hypothetical protein VISI1226_21911 [Vibrio sinaloensis DSM 21326] Length = 262 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 117/216 (54%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y VGV + +++L G V++ QG L FGAE ++++ LRE+G ++ Sbjct: 46 LVKQLYSVGVQSLLIIVLSGLFIGMVLSLQGYVILIDFGAEGALGQMVALSLLRELGPVV 105 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D ++ +I+PR WA +IS+PLL ++ Sbjct: 106 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLKRVIAPRFWAGVISMPLLAMIFM 165 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G V + I F+S ++ L +I +IK+ A + +A+ G+ Sbjct: 166 AVGIWGGQSVGVDWKGIDHGSFWSTMQASVELGQDIGNSMIKSLVFAITVTWIALFNGYD 225 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV S V+ +D + F Sbjct: 226 AIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 261 >gi|261401680|ref|ZP_05987805.1| toluene tolerance ABC efflux transporter, permease [Neisseria lactamica ATCC 23970] gi|269208206|gb|EEZ74661.1| toluene tolerance ABC efflux transporter, permease [Neisseria lactamica ATCC 23970] Length = 258 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 67/215 (31%), Positives = 120/215 (55%), Gaps = 3/215 (1%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215 +RQ+Y+ GV V +V + G V+ QG QLS+F A+I + + L LRE+G +L Sbjct: 43 VRQVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASL-LRELGPVL 101 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ A +G A+ +EIG MK E+++A+ M ++ V +++PR WA + S+PLL + N Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFN 161 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 + I GA +V + + +F+S+ + T+ ++ GLIK+ A+ ++A+ +GF Sbjct: 162 VAGIFGAYLVGVTWLGLDSGIFWSQMQNNITIHYDVINGLIKSVAFGVAVTLIAVHQGFH 221 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 S + + T VV S ++ +D + + F Sbjct: 222 CVPTSEGILRASTRTVVSSALTILAVDFILTAWMF 256 >gi|149190595|ref|ZP_01868864.1| putative ABC superfamily transport protein [Vibrio shilonii AK1] gi|148835593|gb|EDL52561.1| putative ABC superfamily transport protein [Vibrio shilonii AK1] Length = 262 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 117/216 (54%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q++ VGV + ++++ G V++ QG L +GAE ++++ LRE+G ++ Sbjct: 46 LIKQLHNVGVQSLAIIMVSGLFIGMVLSLQGYVVLVDYGAEGSLGQMVALSLLRELGPVV 105 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D ++ +ISPR WA +IS+PLL ++ Sbjct: 106 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLKRVISPRFWAGVISMPLLAMIFM 165 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G +V + I F+S S+ L +I +IK A + +A+ G+ Sbjct: 166 AIGIWGGQLVGVDWKGIDHGSFWSAMQSSVELGRDIGNSVIKCLVFAITVTWIALFNGYD 225 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV S V+ +D + F Sbjct: 226 AIPTSEGISQATTRTVVHSSLAVLGLDFVLTALMFG 261 >gi|74317917|ref|YP_315657.1| hypothetical protein Tbd_1899 [Thiobacillus denitrificans ATCC 25259] gi|74057412|gb|AAZ97852.1| Protein of unknown function DUF140 [Thiobacillus denitrificans ATCC 25259] Length = 262 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 68/226 (30%), Positives = 121/226 (53%), Gaps = 2/226 (0%) Query: 145 SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204 S F+ F L+ +R++Y+ GV + ++++ G V+ QG L +G+E L++ Sbjct: 34 SGTAFRRFGLT-VRELYFTGVLSLIIILVSGLFVGMVLGLQGYETLQTYGSEEALGILVA 92 Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264 + +RE+G ++ A++ A R+GSAI AEIG MK E++ A+ M +D + +++PR WA + Sbjct: 93 LSLVRELGPVVAALLFASRAGSAITAEIGLMKATEQLSAMEMMAVDPIARVVAPRFWAGV 152 Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACA 323 IS+PLL L + + G +V + + F+S+ S +I G+IK+ A Sbjct: 153 ISMPLLAALFSAMGVFGGYLVGVQLIGVDEGAFWSQMQSAVDFEQDILNGVIKSVVFGVA 212 Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 I +A+ EG+ + + + T VV S V+ +D + F F Sbjct: 213 ITAIALFEGYDAPPTAEGVSRATTRTVVTSSLAVLALDFVLTAFMF 258 >gi|302036847|ref|YP_003797169.1| putative ABC transporter permease [Candidatus Nitrospira defluvii] gi|300604911|emb|CBK41244.1| putative ABC transporter, permease component [Candidatus Nitrospira defluvii] Length = 291 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 107/206 (51%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+ + GV +PV +I+ + G +I Q QL + GA ++ + +RE+G L+ Sbjct: 77 LVRQILFTGVDALPVTTVIALLLGIIIVTQAGTQLPRLGAGGLVGSIIVVTVIRELGPLI 136 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA ++ GRSG+AI E+G+M + E+ A+R MG+ R +I PR+ +++S+ LT+ + Sbjct: 137 TAFIVVGRSGTAIATELGNMSVTREVVALRLMGISISRFVIMPRMVGMVLSMLCLTLYFD 196 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 A++G ++ IPF F + ++ IK A+ + G AV Sbjct: 197 VVAVLGGYLIADAQLTIPFYAFVESITKALSTTDVLMTAIKGLSFGSAVAAICCYHGLAV 256 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361 + ++ T ++ S + ++ID Sbjct: 257 RSSFTEVPQQTTRAMINSFVLCLLID 282 >gi|148265726|ref|YP_001232432.1| hypothetical protein Gura_3706 [Geobacter uraniireducens Rf4] gi|146399226|gb|ABQ27859.1| protein of unknown function DUF140 [Geobacter uraniireducens Rf4] Length = 258 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 114/209 (54%), Gaps = 2/209 (0%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 S+ QM +G +PV +++F G V+A Q +L ++G++ ++ +RE+G + Sbjct: 42 SIFAQMAIIGYETLPVASVMAFFVGMVLALQTGVELQKYGSQNIIGAIVGHSMVRELGPV 101 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +T+ ++AGR+GSA+ AE+G M + EEIDA++T+ ++ VR L PR A I+ LP L I + Sbjct: 102 MTSFLVAGRAGSAMAAELGVMTVYEEIDALKTLDINPVRYLAMPRFIACIVCLPALVIYS 161 Query: 275 NFSAIIGASIV--IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 +F I G +I+ + + ++ ++ + I GLIKA I +V+ G Sbjct: 162 DFIGITGGAIISNLHPKIFVSYSTYYDSLTAALKFHEIGIGLIKAFVFGAIIALVSCYIG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIID 361 F + +G T VV S ++++ D Sbjct: 222 FKTSGGARGIGISTTRSVVLSFMLILVAD 250 >gi|212711087|ref|ZP_03319215.1| hypothetical protein PROVALCAL_02156 [Providencia alcalifaciens DSM 30120] gi|212686255|gb|EEB45783.1| hypothetical protein PROVALCAL_02156 [Providencia alcalifaciens DSM 30120] Length = 262 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 76/213 (35%), Positives = 118/213 (55%), Gaps = 13/213 (6%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 L++Q+Y VGV + +V + G V+ QG L+ F AE S+ +M L L RE+G + Sbjct: 46 LVKQLYSVGVQSLLIVAVSGLFIGMVLGLQGYLVLTTFSAEA-SLGMMVALSLLRELGPV 104 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGR+GSA+ AEIG MK E+I ++ M +D +R +++PR WA IS+PLL+++ Sbjct: 105 VTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLRRVVAPRFWAGFISMPLLSLIF 164 Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTAT----LANIFTGLIKAPFMACAIGIVA 328 IIG +I V WK D F F+S S+ L N F IK+ A + +A Sbjct: 165 VAVGIIGGAIVGVDWKGIDPGF--FWSSMQSSVEWRLDLVNCF---IKSVVFAITVTWIA 219 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + G+ S + + T VV + V+ +D Sbjct: 220 LFNGYDAIPTSEGISRATTKTVVHASLSVLGLD 252 >gi|317485263|ref|ZP_07944144.1| hypothetical protein HMPREF0179_01497 [Bilophila wadsworthia 3_1_6] gi|316923554|gb|EFV44759.1| hypothetical protein HMPREF0179_01497 [Bilophila wadsworthia 3_1_6] Length = 265 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 64/213 (30%), Positives = 117/213 (54%), Gaps = 5/213 (2%) Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 + +++Q+Y +G + V+ LI+ TG V+ QG + L +FG+ F +S+ +RE+G Sbjct: 44 IKVLQQLYVIGTKSLFVICLIALFTGMVLGLQGYYVLVKFGSVGFLGAAVSLTLIRELGP 103 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 +LTA+M+ GR+GS++ AEIG M+I ++IDA+ M + + L++PR A +I+ PLLT + Sbjct: 104 VLTAIMVTGRAGSSMAAEIGVMRITDQIDALEVMDIPGMGYLVAPRFVASLIAFPLLTAI 163 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 + IIG + + +F S+ + ++ G IK+ A I ++ +G+ Sbjct: 164 FDVVGIIGGYLTGVLLLGVNEGAYFHGIESSVLMPDVTEGFIKSFVFALLIALICCYQGY 223 Query: 334 AV-----GVHSNSLGKKVTTCVVQSISIVIIID 361 G+ ++ T+ VV S V++ D Sbjct: 224 NAHRRRDGMGPEAVANATTSAVVISCVFVLVAD 256 >gi|297569270|ref|YP_003690614.1| protein of unknown function DUF140 [Desulfurivibrio alkaliphilus AHT2] gi|296925185|gb|ADH85995.1| protein of unknown function DUF140 [Desulfurivibrio alkaliphilus AHT2] Length = 264 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 59/165 (35%), Positives = 98/165 (59%) Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 L +IRQ+ +G + +PV+ + TG V+ QG + L +FGAE ++++ +RE+G Sbjct: 42 LAEVIRQIRLIGANSLPVIFFTAAFTGMVLGLQGYYTLRKFGAEGALGTMVALSLVRELG 101 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 +LTA+M+ GR+GSA+ AEIG M+ +E+IDA+ M +D R LI+P+ A +IS+PLLT+ Sbjct: 102 PVLTALMVIGRAGSAMCAEIGIMRNSEQIDALECMAVDPFRYLIAPKFLATVISIPLLTM 161 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 + N I G + + +F+ + +I G IK+ Sbjct: 162 IFNVVGIFGGYLAGVVLLGVNAGSYFAAMEQSVLAQDINMGFIKS 206 >gi|254411230|ref|ZP_05025007.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] gi|196181731|gb|EDX76718.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] Length = 261 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 66/213 (30%), Positives = 111/213 (52%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + QM VG + + ++ + GAV Q + FGA ++++ RE+ +LT Sbjct: 41 LEQMAVVGPDSLTIALITATFIGAVFTIQVTREFINFGATTAIGGVLALALSRELAPVLT 100 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV+IAGR GSA AEIG+M++ E+IDA+ + D + L+ PR+ A I+ LPLLTIL+ Sbjct: 101 AVVIAGRVGSAFAAEIGTMRVTEQIDALYMLKTDPIDYLVIPRVIACILMLPLLTILSII 160 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + G ++ Y+IP +VF + + ++FT +IKA I ++ G Sbjct: 161 LGMTGGVLIAVNLYNIPQSVFLDSARNFLGIWDLFTAMIKAAVFGMLIAVIGCSWGLTTS 220 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+ TT VV ++ + I + + F Sbjct: 221 GGAKGVGQSTTTAVVTALLAIFITNFFLSWLMF 253 >gi|238756123|ref|ZP_04617444.1| hypothetical protein yruck0001_2780 [Yersinia ruckeri ATCC 29473] gi|238705662|gb|EEP98058.1| hypothetical protein yruck0001_2780 [Yersinia ruckeri ATCC 29473] Length = 260 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/218 (32%), Positives = 117/218 (53%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y VGV + ++++ G V+ QG L+ + AE ++S+ LRE+G ++ Sbjct: 44 LVKQLYSVGVQSLLIIMVSGLFIGMVLGLQGYLILTTYSAEASLGMMVSLSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E+I ++ M +D +R +++PR WA +IS+PLLT + Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFV 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 I G S+ V WK D F F+S ++ LIK+ A + +A+ G Sbjct: 164 AVGIWGGSVVGVDWKGIDSGF--FWSAMQGAVEWRTDLLNCLIKSLVFAITVTWIALFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV S V+ +D + F Sbjct: 222 YDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|311277833|ref|YP_003940064.1| hypothetical protein Entcl_0502 [Enterobacter cloacae SCF1] gi|308747028|gb|ADO46780.1| protein of unknown function DUF140 [Enterobacter cloacae SCF1] Length = 260 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 73/218 (33%), Positives = 118/218 (54%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y VGV + ++I+ G V+ QG L+ + AE L+++ LRE+G ++ Sbjct: 44 LVRQLYNVGVLSMLIIIVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ AGR+GSA+ AEIG M+ E++ ++ M +D +R +ISPR WA +ISLPLLTI+ Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFV 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 I G S+ V WK D F F++ + ++ LIK+ A + +A+ G Sbjct: 164 AVGIWGGSLVGVSWKGIDAGF--FWTAMQNAVEWRMDLVNCLIKSVVFAITVTWIALFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV S V+ +D + F Sbjct: 222 YDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|292670497|ref|ZP_06603923.1| ABC superfamily ATP binding cassette transporter, permease protein [Selenomonas noxia ATCC 43541] gi|292647907|gb|EFF65879.1| ABC superfamily ATP binding cassette transporter, permease protein [Selenomonas noxia ATCC 43541] Length = 310 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 67/215 (31%), Positives = 114/215 (53%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 S+I QM ++G + +V L TG V+ Q A + ++GA+ +++I RE+G + Sbjct: 96 SIIYQMAHLGADSLLIVGLTLLFTGVVLTLQIAHEFIRYGAQSTVGAVIAIGIGRELGPV 155 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 L V+ AGR G+AI AE+ +MK+ E+IDA+R M + V LI PR+ A ++ +P+LT+ Sbjct: 156 LVGVVCAGRVGAAITAEVSTMKVTEQIDALRVMAVSPVNYLIVPRMLACMVVVPILTVFG 215 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 + ++G + Y I F + A + ++ GLIKA F I ++ G Sbjct: 216 DVIGVLGGYLTAVYYSGISAYTFTNSITQFALIYDMTGGLIKAIFFGNVIAVLGCHYGLN 275 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +GK VV SI ++ I++++ F F Sbjct: 276 APSGAEGVGKATMHTVVTSIIVIFILNAVLTFFLF 310 >gi|197119107|ref|YP_002139534.1| transporter membrane protein [Geobacter bemidjiensis Bem] gi|197088467|gb|ACH39738.1| transporter membrane protein of unknown function DUF140 [Geobacter bemidjiensis Bem] Length = 258 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 114/209 (54%), Gaps = 2/209 (0%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 S++ QM +G +PV +++F G V+A Q +L ++G + ++ +RE+G + Sbjct: 42 SILTQMAVIGWDTLPVASVMAFFVGMVLALQTGVELQKYGGQNIIGAIVGHSMVRELGPV 101 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +T+ ++AGR GSA+ AE+G M + EEIDA++T+ +D VR L PR A I+ +P L I + Sbjct: 102 MTSFLVAGRCGSAMAAELGVMTVYEEIDALKTLDIDPVRYLAMPRFIACIVCVPALVIYS 161 Query: 275 NFSAIIGASIVIWKYYDI--PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 + IIG +++ + I +A ++ + I GL K+ I +V+ G Sbjct: 162 DVIGIIGGALISNLHPQIFVSYATYYDSLTDALKIKEIGIGLTKSVAFGSIIALVSCYVG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIID 361 F+ + +G+ T VV S ++++ D Sbjct: 222 FSTSGGARGIGQSTTRSVVLSFMLILVAD 250 >gi|156975891|ref|YP_001446798.1| hypothetical protein VIBHAR_03657 [Vibrio harveyi ATCC BAA-1116] gi|156527485|gb|ABU72571.1| hypothetical protein VIBHAR_03657 [Vibrio harveyi ATCC BAA-1116] Length = 263 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 117/216 (54%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q+Y VGV + ++++ G V++ QG L +GAE ++++ LRE+G ++ Sbjct: 47 LIKQLYSVGVQSLAIIVVSGLFIGMVLSLQGYVVLVDYGAEGSLGQMVALSLLRELGPVV 106 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D ++ +I+PR WA IS+PLL ++ Sbjct: 107 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGAISMPLLAMIFM 166 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I GA +V + + F++ S+ L +I +IK A + +A+ G+ Sbjct: 167 AVGIWGAQLVGVDWKGVDHGSFWAAMQSSVELGQDIGNSMIKCIVFAITVTWIALFNGYD 226 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV S V+ +D + F Sbjct: 227 AIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 262 >gi|269797585|ref|YP_003311485.1| hypothetical protein Vpar_0522 [Veillonella parvula DSM 2008] gi|282850033|ref|ZP_06259415.1| conserved hypothetical protein [Veillonella parvula ATCC 17745] gi|269094214|gb|ACZ24205.1| protein of unknown function DUF140 [Veillonella parvula DSM 2008] gi|282580222|gb|EFB85623.1| conserved hypothetical protein [Veillonella parvula ATCC 17745] Length = 253 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 66/212 (31%), Positives = 112/212 (52%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +QM ++GV +P++ L GAV+ Q L +GA+ LM++ RE+G +L Sbjct: 42 QQMAHLGVDSLPIISLTLLFAGAVMTLQITDVLITYGAQSTVGGLMAVAMGRELGPILVG 101 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 V++AGR G+AI AEIG+MK+ E+IDA+R M +D V L+ PR+ A +I +P+L Sbjct: 102 VVLAGRVGAAITAEIGTMKVTEQIDALRVMAVDPVGYLVVPRVVACMIMVPILAFYGVVI 161 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 I G V + + + +T+++ GLIK+ I +V +G + Sbjct: 162 GIAGGYFVATVIKGLAPSTYLDSIQMFSTISDFTLGLIKSSVFGAVIALVGAYKGMETKM 221 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + ++G T+ VV SI +V +++ + F Sbjct: 222 GAEAVGFSTTSSVVTSIILVFVLNYFLSTLLF 253 >gi|16762074|ref|NP_457691.1| hypothetical protein STY3491 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16766607|ref|NP_462222.1| transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29143563|ref|NP_806905.1| hypothetical protein t3229 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56415241|ref|YP_152316.1| hypothetical protein SPA3179 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62181820|ref|YP_218237.1| ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161616322|ref|YP_001590287.1| hypothetical protein SPAB_04130 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167552038|ref|ZP_02345791.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167994505|ref|ZP_02575596.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168231923|ref|ZP_02656981.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168238014|ref|ZP_02663072.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168243148|ref|ZP_02668080.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168262675|ref|ZP_02684648.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168463462|ref|ZP_02697379.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168819618|ref|ZP_02831618.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194443328|ref|YP_002042570.1| toluene ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194449369|ref|YP_002047341.1| toluene ABC transporter permease [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194470890|ref|ZP_03076874.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194737604|ref|YP_002116262.1| toluene ABC transporter permease [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197251770|ref|YP_002148237.1| toluene ABC transporter permease [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197262344|ref|ZP_03162418.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197364171|ref|YP_002143808.1| hypothetical protein SSPA2967 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|200388463|ref|ZP_03215075.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204931189|ref|ZP_03221983.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205354213|ref|YP_002228014.1| hypothetical protein SG3202 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858560|ref|YP_002245211.1| hypothetical protein SEN3145 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213163395|ref|ZP_03349105.1| hypothetical protein Salmoneentericaenterica_26575 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213420406|ref|ZP_03353472.1| hypothetical protein Salmonentericaenterica_22736 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213426645|ref|ZP_03359395.1| hypothetical protein SentesTyphi_14148 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213618602|ref|ZP_03372428.1| hypothetical protein SentesTyp_19883 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213646981|ref|ZP_03377034.1| hypothetical protein SentesTy_06536 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213857745|ref|ZP_03384716.1| hypothetical protein SentesT_21720 [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|224585109|ref|YP_002638908.1| hypothetical protein SPC_3382 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238910106|ref|ZP_04653943.1| hypothetical protein SentesTe_03070 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289825822|ref|ZP_06544990.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25319166|pir||AG0904 probable membrane protein STY3491 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16421869|gb|AAL22181.1| putative ABC superfamily transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16504377|emb|CAD07829.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29139198|gb|AAO70765.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56129498|gb|AAV79004.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62129453|gb|AAX67156.1| putative ABC superfamily (membr) transport protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161365686|gb|ABX69454.1| hypothetical protein SPAB_04130 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194401991|gb|ACF62213.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407673|gb|ACF67892.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194457254|gb|EDX46093.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194713106|gb|ACF92327.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195633368|gb|EDX51782.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197095648|emb|CAR61216.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197215473|gb|ACH52870.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197240599|gb|EDY23219.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289146|gb|EDY28515.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|199605561|gb|EDZ04106.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204319956|gb|EDZ05162.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205273994|emb|CAR39000.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205323252|gb|EDZ11091.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205327645|gb|EDZ14409.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205333943|gb|EDZ20707.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205337808|gb|EDZ24572.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343404|gb|EDZ30168.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205348318|gb|EDZ34949.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206710363|emb|CAR34721.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224469637|gb|ACN47467.1| hypothetical protein SPC_3382 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261248477|emb|CBG26314.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995511|gb|ACY90396.1| putative transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159861|emb|CBW19380.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914339|dbj|BAJ38313.1| toluene ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320087757|emb|CBY97521.1| UPF0393 inner membrane protein yrbE [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321225264|gb|EFX50323.1| Uncharacterized ABC transporter, permease component YrbE [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322615316|gb|EFY12237.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618325|gb|EFY15216.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622870|gb|EFY19714.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626808|gb|EFY23605.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631377|gb|EFY28137.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635356|gb|EFY32070.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643355|gb|EFY39919.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647073|gb|EFY43574.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648876|gb|EFY45321.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655068|gb|EFY51379.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657671|gb|EFY53939.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664167|gb|EFY60365.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667450|gb|EFY63612.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674698|gb|EFY70790.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675669|gb|EFY71742.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682305|gb|EFY78328.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684908|gb|EFY80906.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322716309|gb|EFZ07880.1| putative phospholipid ABC transporter permease protein mlaE [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323131672|gb|ADX19102.1| putative transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323195887|gb|EFZ81058.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199004|gb|EFZ84101.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204296|gb|EFZ89305.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207643|gb|EFZ92590.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211304|gb|EFZ96148.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214754|gb|EFZ99503.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221234|gb|EGA05660.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224025|gb|EGA08318.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230326|gb|EGA14445.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233302|gb|EGA17396.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239339|gb|EGA23389.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242410|gb|EGA26436.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246920|gb|EGA30886.1| toluene transporter subunit: membrane component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254147|gb|EGA37967.1| toluene transporter subunit: membrane component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255264|gb|EGA39041.1| toluene transporter subunit: membrane component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262727|gb|EGA46283.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264037|gb|EGA47545.1| toluene transporter subunit: membrane component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269423|gb|EGA52878.1| toluene transporter subunit: membrane component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326625062|gb|EGE31407.1| putative phospholipid ABC transporter permease protein mlaE [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326629335|gb|EGE35678.1| Putative membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 260 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 73/218 (33%), Positives = 118/218 (54%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y VGV + ++I+ G V+ QG L+ + AE L+++ LRE+G ++ Sbjct: 44 LVRQLYNVGVLSMLIIIVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ AGR+GSA+ AEIG M+ E++ ++ M +D +R +ISPR WA +ISLPLLTI+ Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFV 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 I G S+ V WK D F F+S + ++ LIK+ A + +A+ G Sbjct: 164 AVGIWGGSLVGVSWKGIDAGF--FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWIALFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV + V+ +D + F Sbjct: 222 YDAIPTSAGISRATTRTVVHASLAVLGLDFVLTALMFG 259 >gi|253700132|ref|YP_003021321.1| hypothetical protein GM21_1507 [Geobacter sp. M21] gi|251774982|gb|ACT17563.1| protein of unknown function DUF140 [Geobacter sp. M21] Length = 258 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 114/209 (54%), Gaps = 2/209 (0%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 S++ QM +G +PV +++F G V+A Q +L ++G + ++ +RE+G + Sbjct: 42 SILTQMAVIGWDTLPVASVMAFFVGMVLALQTGVELQKYGGQNIIGAIVGHSMVRELGPV 101 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +T+ ++AGR GSA+ AE+G M + EEIDA++T+ +D VR L PR A I+ +P L I + Sbjct: 102 MTSFLVAGRCGSAMAAELGVMTVYEEIDALKTLDIDPVRYLAMPRFIACIVCVPALVIYS 161 Query: 275 NFSAIIGASIVIWKYYDI--PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 + IIG +++ + I +A ++ + I GL K+ I +V+ G Sbjct: 162 DVIGIIGGALISNLHPQIFVSYATYYDSLTDALKIREIGIGLTKSVAFGSIIALVSCYVG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIID 361 F+ + +G+ T VV S ++++ D Sbjct: 222 FSTSGGARGIGQSTTRSVVLSFMLILVAD 250 >gi|291532196|emb|CBL05309.1| conserved hypothetical integral membrane protein [Megamonas hypermegale ART12/1] Length = 256 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 72/254 (28%), Positives = 128/254 (50%), Gaps = 5/254 (1%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +KI +F+ ++I NT + ++ + + +QM ++GV +P++ L Sbjct: 7 EKIGRFVIGHLETLGQFTILIGNT----IAQLRYPPRMRHVFQQMSHLGVDTLPIITLTM 62 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 TG VI Q A + + GA+ +++I RE+G +L V+ AGR G+AI AEI +M Sbjct: 63 LFTGMVITLQTATEFIRLGAQSTVGGIVTIAVGRELGPVLAGVVTAGRVGAAITAEISTM 122 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K+ E+IDA++ M + + L+ PR+ A + LP+L + + IG +V +YYDI Sbjct: 123 KVTEQIDALKVMATNPIGYLVVPRLIACMFMLPILVVFGDVIGSIGGWMV-AEYYDINIY 181 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 ++ + + +I GL+K+ I IV G + +GK T VV SI Sbjct: 182 MYLHSIDTFVDVHDITGGLLKSIVFGAIIAIVGCYYGLNAQNGAEGVGKATTRSVVISII 241 Query: 356 IVIIIDSLFAIFYF 369 ++ + L ++ + Sbjct: 242 VIFFSNCLLSMLLY 255 >gi|254442342|ref|ZP_05055818.1| conserved hypothetical protein [Verrucomicrobiae bacterium DG1235] gi|198256650|gb|EDY80958.1| conserved hypothetical protein [Verrucomicrobiae bacterium DG1235] Length = 260 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/262 (27%), Positives = 133/262 (50%), Gaps = 12/262 (4%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 IG++ ++ +++ LG + + + + K + L R ++ +GV VP+ ++ Sbjct: 5 IGRQSIRLVSE-------LGELAGFSAQASVALPKQRHIFEKLSRAIFEIGVRCVPITLI 57 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 + TG V+ Q + L++F +E +++ + EIG + TA+MI G++GSA+ AEIG Sbjct: 58 VGLFTGLVLGLQLYYVLAKFSSESLLGQAVALSIILEIGPVFTAIMIVGQAGSALSAEIG 117 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 + E+IDA+ TM +D + L+SPR+WA II+ P+LT + I G + + + Sbjct: 118 IQRNAEQIDALHTMQIDPIGFLVSPRLWAAIIAFPILTTFFDLIGIYGGYLTGVELLGVD 177 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK-----VTT 348 +++R + NI+ GLIKA ++ +G+ + ++ G + T Sbjct: 178 PGAYWNRIFEAVSPQNIYNGLIKALAFGIITTLICAFQGYFTHIKADIPGARGVSQTTTR 237 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV S +++ D L F A Sbjct: 238 AVVYSSIAILMFDYLITSFQMA 259 >gi|28899437|ref|NP_799042.1| ABC transporter [Vibrio parahaemolyticus RIMD 2210633] gi|153839285|ref|ZP_01991952.1| toluene tolerance protein Ttg2B [Vibrio parahaemolyticus AQ3810] gi|260363394|ref|ZP_05776246.1| organic solvent ABC transporter, permease protein [Vibrio parahaemolyticus K5030] gi|260879329|ref|ZP_05891684.1| organic solvent ABC transporter, permease protein [Vibrio parahaemolyticus AN-5034] gi|260895712|ref|ZP_05904208.1| organic solvent ABC transporter, permease protein [Vibrio parahaemolyticus Peru-466] gi|260900285|ref|ZP_05908680.1| organic solvent ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037] gi|28807673|dbj|BAC60926.1| putative ABC superfamily transport protein [Vibrio parahaemolyticus RIMD 2210633] gi|149747186|gb|EDM58174.1| toluene tolerance protein Ttg2B [Vibrio parahaemolyticus AQ3810] gi|308087410|gb|EFO37105.1| organic solvent ABC transporter, permease protein [Vibrio parahaemolyticus Peru-466] gi|308093131|gb|EFO42826.1| organic solvent ABC transporter, permease protein [Vibrio parahaemolyticus AN-5034] gi|308107579|gb|EFO45119.1| organic solvent ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037] gi|308111178|gb|EFO48718.1| organic solvent ABC transporter, permease protein [Vibrio parahaemolyticus K5030] gi|328471426|gb|EGF42321.1| ABC transporter [Vibrio parahaemolyticus 10329] Length = 263 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 117/216 (54%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q+Y VGV + ++++ G V++ QG L +GAE ++++ LRE+G ++ Sbjct: 47 LIKQLYSVGVQSLAIIVVSGLFIGMVLSLQGYVVLVDYGAEGSLGQMVALSLLRELGPVV 106 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D ++ +I+PR WA IS+PLL ++ Sbjct: 107 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGAISMPLLAMIFM 166 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I GA +V + + F++ S+ L +I +IK A + +A+ G+ Sbjct: 167 AVGIWGAQLVGVDWKGVDHGSFWAAMQSSVELGQDIGNSMIKCFVFAITVTWIALFNGYD 226 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV S V+ +D + F Sbjct: 227 AIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 262 >gi|238918531|ref|YP_002932045.1| hypothetical protein NT01EI_0581 [Edwardsiella ictaluri 93-146] gi|238868099|gb|ACR67810.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 235 Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 73/219 (33%), Positives = 118/219 (53%), Gaps = 7/219 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 L RQ+Y VGV + ++I+ G V+ QG L+ + AE S+ +M L L RE+G + Sbjct: 19 LRRQLYSVGVQSLLIIIVSGLFIGMVLGLQGYLVLTTYSAEA-SLGMMVALSLLRELGPV 77 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +++PR WA +IS+PLLT++ Sbjct: 78 VTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLTVIF 137 Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331 I G S+ V WK D F F+S ++ LIK+ A + +A+ Sbjct: 138 VAVGIWGGSVVGVDWKGIDAGF--FWSAMQGAVDYRTDLLNCLIKSLIFAITVMWIALFN 195 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+ S + + T VV + V+ +D + F Sbjct: 196 GYDAVPTSAGISRATTRTVVHASLAVLGLDFVLTALMFG 234 >gi|311746375|ref|ZP_07720160.1| putative ABC transporter, permease protein [Algoriphagus sp. PR1] gi|126575261|gb|EAZ79593.1| putative ABC transporter, permease protein [Algoriphagus sp. PR1] Length = 263 Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 62/211 (29%), Positives = 114/211 (54%) Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 L + Q Y +GV +P++ L F+ G V Q LS+FGA + L+SI +R +G Sbjct: 42 LKEVFHQCYRIGVESLPLISLTGFIVGIVFTNQSRPSLSEFGATSWLPSLISIAVVRAMG 101 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 L+TA++ AG+ GS+I AEIGSMK+ E+IDA+ + + L+ R+ A +P+L + Sbjct: 102 PLVTALIAAGKMGSSIGAEIGSMKVTEQIDAMEVSATNPFKFLVVTRVLATTFMIPILVM 161 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 +F A++G+ + + + FF + + + +I + ++K+ IGIV +G Sbjct: 162 YTDFVALMGSFLSVNANEMVSMTTFFVQVFESISFLDITSSVLKSLLFGFTIGIVGCYKG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + + +G+ + VV ++ ++ I + L Sbjct: 222 YNSSKGTEGVGRAANSAVVMAMFLIFIEELL 252 >gi|312887098|ref|ZP_07746702.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM 18603] gi|311300410|gb|EFQ77475.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM 18603] Length = 256 Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 70/244 (28%), Positives = 126/244 (51%), Gaps = 7/244 (2%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 F++++ S A TG F + + + + L+ Q Y +G P++ L F+ G Sbjct: 9 SFLDETGSMAKF-------TGHFFSHGLRPRFEVKELLGQCYTIGYKSFPLIGLTGFIMG 61 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+ Q L +G + ++ I +REIG ++TA++ AG+ GS+I AE+GSMK+ E Sbjct: 62 LVLTMQLRPSLVSYGVQSELPVMVGIAIVREIGPVITALIFAGKIGSSIGAELGSMKVTE 121 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +IDA+ G + + L++ R+ A + LP+LT+L + ++ GA I + FF+ Sbjct: 122 QIDAMEVSGTNPYKYLVATRVLATTLMLPILTVLGDAISLFGAYIGVNLSSVTSLHFFFT 181 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 + + + ++I + K F A+GI+ +GF + +G + VV S ++ I Sbjct: 182 QVFQSLSFSDILPAITKTFFFGFAVGIIGCYKGFNSSKGTQGVGVSANSAVVLSSVLIFI 241 Query: 360 IDSL 363 ID L Sbjct: 242 IDLL 245 >gi|329297311|ref|ZP_08254647.1| hypothetical protein Pstas_13477 [Plautia stali symbiont] Length = 260 Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 68/217 (31%), Positives = 117/217 (53%), Gaps = 5/217 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y VGV + ++++ G V+ QG L+ + AE L+++ LRE+G ++ Sbjct: 44 LVKQLYSVGVLSLLIIVVSGLFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R ++SPR WA IS+PLL ++ Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVVSPRFWAGFISMPLLALIFT 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 I G ++ V WK D F F+S + ++ LIK+ A + +A+ G Sbjct: 164 AVGIAGGALVGVAWKGIDPGF--FWSTMQNAVDFRTDVINCLIKSAVFAITVTWIALFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + S + + T VV + V+ +D + F Sbjct: 222 YDAIPTSEGISRATTRTVVHASLAVLGLDFVLTALMF 258 >gi|300724964|ref|YP_003714289.1| putative ABC transporter membrane protein [Xenorhabdus nematophila ATCC 19061] gi|297631506|emb|CBJ92213.1| putative transport protein (ABC superfamily, membrane) [Xenorhabdus nematophila ATCC 19061] Length = 262 Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 74/221 (33%), Positives = 120/221 (54%), Gaps = 7/221 (3%) Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIG 212 L L +Q+Y VGV + ++++ G V+A QG L+ F AE S+ +M L L RE+G Sbjct: 44 LLLRQQLYSVGVQSLLIIVVSGLFIGMVLALQGYLVLTTFSAE-GSLGMMVALSLLRELG 102 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 ++TA++ AGR+GSA+ AEIG MK E+I ++ M +D +R +++PR WA IS+PLLT+ Sbjct: 103 PVVTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLRRVVAPRFWAGFISMPLLTL 162 Query: 273 LANFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAM 329 + I+G +I V WK D F F+S S ++ +K+ A + +A+ Sbjct: 163 IFVAVGILGGAIVGVDWKGIDAGF--FWSSMQSAVEWKKDLLNCFLKSVVFAITVTWIAL 220 Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+ S + + T VV + V+ +D + F Sbjct: 221 FNGYDAIPTSEGISRATTRTVVHASLAVLGLDFVLTALMFG 261 >gi|218550477|ref|YP_002384268.1| toluene ABC transporter membrane protein [Escherichia fergusonii ATCC 35469] gi|218358018|emb|CAQ90664.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia fergusonii ATCC 35469] gi|324115202|gb|EGC09166.1| inner membrane protein yrbE [Escherichia fergusonii B253] gi|325498775|gb|EGC96634.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia fergusonii ECD227] Length = 260 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 74/218 (33%), Positives = 118/218 (54%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LIRQ+Y VGV + ++I+ G V+ QG L+ + AE L+++ LRE+G ++ Sbjct: 44 LIRQIYNVGVLSMLIIIVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ AGR+GSA+ AEIG M+ E++ ++ M +D +R +ISPR WA +ISLPLLTI+ Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFV 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEG 332 I G S+ V WK D F F+S + ++ LIK+ A + +A+ G Sbjct: 164 AVGIWGGSLVGVSWKGIDAGF--FWSAMQNAVDWRLDLVNCLIKSVVFAITVTWIALFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV + V+ +D + F Sbjct: 222 YDAIPTSAGISRATTRTVVHASLAVLGLDFVLTALMFG 259 >gi|320640265|gb|EFX09837.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli O157:H7 str. G5101] Length = 260 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 71/218 (32%), Positives = 118/218 (54%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y VGV + ++++ G V+ QG L+ + AE L+++ LRE+G ++ Sbjct: 44 LVRQLYNVGVLSMLIIVVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ AGR+GSA+ AEIG M+ E++ ++ M +D +R +ISPR WA +ISLPLLT++ Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFA 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 I G S+ V WK D F F+S + ++ LIK+ A + +++ G Sbjct: 164 AVGIWGGSLVGVSWKGIDSGF--FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV S V+ +D + F Sbjct: 222 YDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|325109134|ref|YP_004270202.1| hypothetical protein Plabr_2580 [Planctomyces brasiliensis DSM 5305] gi|324969402|gb|ADY60180.1| protein of unknown function DUF140 [Planctomyces brasiliensis DSM 5305] Length = 271 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 63/208 (30%), Positives = 113/208 (54%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L +Y +GV +PVV++ G V+A Q QL E ++++ ++E+G +L Sbjct: 50 LWPNLYQIGVLSLPVVMVTGGFIGMVLAIQTYDQLRLMHMESHLGSVINLALVKELGPVL 109 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A M+AGR GSAI AE+G+M++ E+IDA+ +G D V+ L+ PR ++ +PLLTI+A+ Sbjct: 110 AATMLAGRVGSAIAAELGTMRVTEQIDALEALGADPVQYLVVPRFLGCVLLIPLLTIVAD 169 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 ++ + I ++ ++ TL ++++G++K+ F AI +V+ GF Sbjct: 170 TVGMLCGWLFSTSVLGINSYFYWHHTYAYITLFDVYSGIMKSVFFGAAIALVSCHRGFQA 229 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + +G T V S ++ +D L Sbjct: 230 KAGAEGVGTAATQTFVYSFVCILFLDFL 257 >gi|294793372|ref|ZP_06758517.1| putative membrane protein [Veillonella sp. 6_1_27] gi|294795191|ref|ZP_06760325.1| putative membrane protein [Veillonella sp. 3_1_44] gi|294453983|gb|EFG22358.1| putative membrane protein [Veillonella sp. 3_1_44] gi|294455803|gb|EFG24168.1| putative membrane protein [Veillonella sp. 6_1_27] Length = 254 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 66/212 (31%), Positives = 112/212 (52%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +QM ++GV +P++ L GAV+ Q L +GA+ LM++ RE+G +L Sbjct: 43 QQMAHLGVDSLPIISLTLLFAGAVMTLQITDVLITYGAQSTVGGLMAVAMGRELGPILVG 102 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 V++AGR G+AI AEIG+MK+ E+IDA+R M +D V L+ PR+ A +I +P+L Sbjct: 103 VVLAGRVGAAITAEIGTMKVTEQIDALRVMAVDPVGYLVVPRVVACMIMVPILAFYGVVI 162 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 I G V + + + +T+++ GLIK+ I +V +G + Sbjct: 163 GIAGGYFVATVIKGLAPSTYLDSIQMFSTISDFTLGLIKSSVFGAVIALVGAYKGMETKM 222 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + ++G T+ VV SI +V +++ + F Sbjct: 223 GAEAVGFSTTSSVVTSIILVFVLNYFLSTLLF 254 >gi|261415260|ref|YP_003248943.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371716|gb|ACX74461.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327576|gb|ADL26777.1| putative membrane protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 261 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 116/207 (56%) Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 L + + QM++VG++ +PVV S TGA+++ Q A+Q +F + + E+ Sbjct: 44 LHTTVEQMHHVGITSIPVVFAASLATGAIMSWQLAYQFGDMIPMMFVGMAVGKSVMVELC 103 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 +LTA+++AGR G+++ +E+G+M + E++DA + +GL+ + L++PR+ A +I LP+LTI Sbjct: 104 PILTAMVLAGRIGASMCSELGTMAVTEQLDAYKVLGLNPYKYLLAPRLIATVIMLPVLTI 163 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 L+ F I+G V Y ++ ++VFF ++ GLIKA I A G Sbjct: 164 LSIFIGIVGGYEVAHLYKEVSWSVFFYGVRMFYQNWDLVVGLIKATLYGFFISSYACFFG 223 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVII 359 F + +GK VV ++ ++I Sbjct: 224 FFTHSGAEGVGKSTKATVVAGMTSILI 250 >gi|313894582|ref|ZP_07828145.1| conserved hypothetical protein [Veillonella sp. oral taxon 158 str. F0412] gi|313440772|gb|EFR59201.1| conserved hypothetical protein [Veillonella sp. oral taxon 158 str. F0412] Length = 256 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 112/212 (52%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +QM ++GV +P++ L GAV+ Q L +GA+ LM++ RE+G +L Sbjct: 45 QQMAHLGVDSLPIISLTLLFAGAVMTLQITDVLITYGAQSTVGGLMAVAMGRELGPILVG 104 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 V++AGR G+AI AEIG+MK+ E+IDA+R M +D V L+ PR+ A ++ +P+L Sbjct: 105 VVLAGRVGAAITAEIGTMKVTEQIDALRVMAVDPVGYLVVPRVVACMVMVPILAFYGVVI 164 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 I G V + + + +T+++ GLIK+ I +V +G + Sbjct: 165 GIAGGYFVATAIKGLAPSTYLDSIQMFSTISDFTLGLIKSSVFGAVIALVGAYKGMETKM 224 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + ++G T+ VV SI +V +++ + + Sbjct: 225 GAEAVGFSTTSSVVTSIILVFVLNYFLSTLLY 256 >gi|221134714|ref|ZP_03561017.1| hypothetical protein GHTCC_07282 [Glaciecola sp. HTCC2999] Length = 258 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 72/234 (30%), Positives = 129/234 (55%), Gaps = 3/234 (1%) Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198 TG A + K L+L +Q+Y VGV + ++++ G V+A QG L +GAE Sbjct: 26 TGALIAVP-QLKNIRLTL-QQIYVVGVQSLLIILVSGLFIGMVMALQGYTILVGYGAEGS 83 Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258 ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +++P Sbjct: 84 LGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVVAP 143 Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKA 317 R+WA IIS+P+L I+ + I+G +V + + ++S +T ++ G+IK+ Sbjct: 144 RVWAGIISMPMLAIIFSAIGILGGHLVGVDWLGVDSGSYWSIMQATVDWNKDVVNGIIKS 203 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 A + +A+ +G+ S + + T VV S V+ +D + F I Sbjct: 204 IVFAIVVTWIAIFKGYDAVPTSEGISQATTQTVVYSSLAVLGLDFVLTALMFGI 257 >gi|317494033|ref|ZP_07952449.1| hypothetical protein HMPREF0864_03218 [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917806|gb|EFV39149.1| hypothetical protein HMPREF0864_03218 [Enterobacteriaceae bacterium 9_2_54FAA] Length = 260 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 75/219 (34%), Positives = 118/219 (53%), Gaps = 7/219 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 L +Q+Y VGV + ++I+ G V+ QG L+ + AE S+ +M L L RE+G + Sbjct: 44 LRKQLYSVGVQSLLIIIVSGLFIGMVLGLQGYLILTTYSAEA-SLGMMVALSLLRELGPV 102 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGR+GSA+ AEIG MK E+I ++ M +D +R +++PR WA IIS+PLLT + Sbjct: 103 VTALLFAGRAGSAVTAEIGLMKATEQISSMEMMAVDPLRRIVAPRFWAGIISMPLLTAIF 162 Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331 I G S+ V WK D F F+S + ++ +IK+ A I +A+ Sbjct: 163 VAVGIWGGSVVGVDWKGIDSGF--FWSAMQGSVDFHTDLVNCMIKSVVFAITIMWIALFN 220 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+ S + + T VV S V+ +D + F Sbjct: 221 GYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|298369697|ref|ZP_06981014.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314] gi|298282254|gb|EFI23742.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314] Length = 258 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 120/215 (55%), Gaps = 3/215 (1%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215 IRQ+Y+ GV V ++ + G V+ QG QL++F A+I + + L LRE+G +L Sbjct: 43 IRQVYFSGVMSVLIIAVSGLFVGMVLGLQGYTQLAKFKSADILGYMVAASL-LRELGPVL 101 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ A +G A+ +EIG MK E+++A+ M +D V +++PR WA + S+PLL + N Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVDPVARVVAPRFWAGVFSMPLLASIFN 161 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 + I GA +V ++ + +F+++ + + ++ GLIK+ A+ ++A+ +GF Sbjct: 162 VAGIYGAYLVGVQWLGLDGGIFWAQMQNNISFGYDVANGLIKSAAFGTAVTLIAVHQGFH 221 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 S + + T VV S ++ +D + + F Sbjct: 222 CVPTSEGILRASTRTVVSSALTILAVDFVLTAWMF 256 >gi|161506125|ref|YP_001573237.1| hypothetical protein SARI_04313 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160867472|gb|ABX24095.1| hypothetical protein SARI_04313 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 260 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 72/218 (33%), Positives = 118/218 (54%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y VGV + ++++ G V+ QG L+ + AE L+++ LRE+G ++ Sbjct: 44 LVRQLYNVGVLSMLIIVVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ AGR+GSA+ AEIG M+ E++ ++ M +D +R +ISPR WA +ISLPLLTI+ Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFV 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 I G S+ V WK D F F+S + ++ LIK+ A + +A+ G Sbjct: 164 AVGIWGGSLVGVSWKGIDAGF--FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWIALFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV + V+ +D + F Sbjct: 222 YDAIPTSAGISRATTRTVVHASLAVLGLDFVLTALMFG 259 >gi|34495903|ref|NP_900118.1| ABC transporter permease [Chromobacterium violaceum ATCC 12472] gi|34101758|gb|AAQ58126.1| probable ABC transport system permease protein [Chromobacterium violaceum ATCC 12472] Length = 257 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 63/214 (29%), Positives = 117/214 (54%), Gaps = 1/214 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 IR++Y+ GV + ++++ G V+ QG L++FG+ ++++ LRE+G +L Sbjct: 44 IREIYFAGVMSLIIIVVSGLFVGMVLGLQGYTTLAKFGSADALGAMVALALLRELGPVLA 103 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ A R+GSA+ AEIG MK E++DA+ M ++ + +I+PR WA ++S+P+L L N Sbjct: 104 ALLFASRAGSAMTAEIGLMKTTEQLDAMSVMAVNPMARVIAPRFWAGVVSMPILAALFNV 163 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAV 335 I G +V + F+S+ L ++ G+IK+ A+ ++A+ EG+ Sbjct: 164 VGIFGGYLVGVVMIGLDAGTFWSQMQGNVDLHYDVVNGIIKSLVFGIAVTLIAVFEGYDA 223 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + + T VV S +++ +D + F F Sbjct: 224 TPTAAGVSAATTRTVVTSALVILALDFVLTAFMF 257 >gi|49082890|gb|AAT50845.1| PA4455 [synthetic construct] Length = 266 Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 60/216 (27%), Positives = 121/216 (56%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y VGV + ++++ G V+A QG L +G+E ++++ LRE+G ++ Sbjct: 48 LVKQLYSVGVLSLAIIVVSGLFIGMVLALQGYNILISYGSEQAVGQMVALTLLRELGPVV 107 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 T ++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA IS+PLL + + Sbjct: 108 TGLLFAGRAGSALTAEIGNMKATEQLSSLEMIGVDPLKYIVAPRLWAGFISMPLLAAIFS 167 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G ++V + + F++ ++ ++ G+IK+ A + +A+ +G+ Sbjct: 168 VVGIWGGAMVAVDWLGVYEGSFWANMQNSVQFTEDVLNGVIKSIVFAFVVTWIAVYQGYD 227 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 228 CEPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 263 >gi|16127925|ref|NP_422489.1| ABC transporter permease [Caulobacter crescentus CB15] gi|221236745|ref|YP_002519182.1| organic solvent resistance transport system permease [Caulobacter crescentus NA1000] gi|13425459|gb|AAK25657.1| ABC transporter, permease protein, putative [Caulobacter crescentus CB15] gi|220965918|gb|ACL97274.1| organic solvent resistance transport system permease [Caulobacter crescentus NA1000] Length = 269 Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 69/217 (31%), Positives = 113/217 (52%) Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211 FL L RQ+ +G +PVV L + TGA +A +F AE ++++ RE+ Sbjct: 49 FLSQLRRQIVAIGFFSLPVVGLTAVFTGAALALNIFTGGGRFNAEQVMPQIVALGITREL 108 Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271 G +L A+M+AGR +AI AEIG+M+ E+IDA+RT+ D R L++PR+ A +++LPLLT Sbjct: 109 GPVLAALMLAGRVSAAIAAEIGAMRATEQIDAMRTLSTDPFRYLVAPRLLAAVLTLPLLT 168 Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 +A+ I G +V + + V+ +I +GLIKA + ++ Sbjct: 169 AVADIIGIAGGWLVATRVLEFNPTVYIRNTIDFLESWDIISGLIKAAVFGFIVALMGCYH 228 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 G+ + +G+ T VV S ++ D L + Sbjct: 229 GYNASGGARGVGRATTHAVVSSAILIFATDYLLTTLF 265 >gi|332140253|ref|YP_004425991.1| putative transport protein (ABC superfamily, membrane) [Alteromonas macleodii str. 'Deep ecotype'] gi|327550275|gb|AEA96993.1| putative transport protein (ABC superfamily, membrane) [Alteromonas macleodii str. 'Deep ecotype'] Length = 258 Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 66/216 (30%), Positives = 121/216 (56%), Gaps = 1/216 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I+Q+Y VGV + ++++ G V+A QG L +GAE ++++ LRE+G ++T Sbjct: 42 IKQLYVVGVQSLLIIMVSGLFIGMVMALQGYTILVDYGAEGSLGPMVALSLLRELGPVVT 101 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+GSA+ AEIG MK E++ ++ M +D +R +++PR WA ++++P+L I+ + Sbjct: 102 ALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRIVAPRFWAGMLAMPMLAIIFSA 161 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I+G +V + + ++S ST ++ G+IK+ A + +A+ +G+ Sbjct: 162 IGILGGHLVGVDWLGVDAGSYWSIMQSTVDWNQDVINGVIKSLVFALVVTWIAIFKGYDS 221 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 S + K T VV S V+ +D + F I Sbjct: 222 IPTSEGISKATTETVVYSSLAVLGLDFVLTALMFGI 257 >gi|307544520|ref|YP_003896999.1| ABC transporter permease [Halomonas elongata DSM 2581] gi|307216544|emb|CBV41814.1| probable ABC-type transport system permease protein [Halomonas elongata DSM 2581] Length = 260 Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 73/252 (28%), Positives = 135/252 (53%), Gaps = 12/252 (4%) Query: 116 KKIVKFINDSCSQAHILG-----LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170 ++I + C+ LG LV S G+ A + +RQM++VGV + + Sbjct: 3 ERIARLGRWGCNTLESLGDAGIFLVQSMFGKPSAEGMRL------WLRQMHFVGVMSLAI 56 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 V++ G V+A QG L FGAE ++++ LRE+ ++ A++ AGR+GSA+ A Sbjct: 57 VLVSGLFIGMVLALQGYTILVDFGAEDALGQMVALSLLRELAPVVAALLFAGRAGSALTA 116 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 EIG MK E++ ++ +G+D +R +++PR+WA ++LPLLTI + G +V ++ Sbjct: 117 EIGLMKATEQLTSMEMIGVDPLRRVVAPRLWAGFVALPLLTIGFGVVGVWGGQLVGVQWL 176 Query: 291 DIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 + ++ ++ +A++ GLIK+ A + +A+ +G+A+ S + + T Sbjct: 177 GVFEGSYWGNMQASVDFIADVGNGLIKSLVFALVVTWIAVYQGYALVPTSEGISRATTRT 236 Query: 350 VVQSISIVIIID 361 VV + V+ +D Sbjct: 237 VVYASLAVLGLD 248 >gi|82778508|ref|YP_404857.1| hypothetical protein SDY_3375 [Shigella dysenteriae Sd197] gi|170765889|ref|ZP_02900700.1| toluene ABC transporter, permease protein [Escherichia albertii TW07627] gi|81242656|gb|ABB63366.1| conserved hypothetical protein [Shigella dysenteriae Sd197] gi|170125035|gb|EDS93966.1| toluene ABC transporter, permease protein [Escherichia albertii TW07627] Length = 260 Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 72/218 (33%), Positives = 118/218 (54%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y VGV + ++++ G V+ QG L+ + AE L+++ LRE+G ++ Sbjct: 44 LVRQLYNVGVLSMLIIVVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ AGR+GSA+ AEIG M+ E++ ++ M +D +R +ISPR WA +ISLPLLTI+ Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFV 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 I G S+ V WK D F F+S + ++ LIK+ A + +++ G Sbjct: 164 AVGIWGGSLVGVSWKGIDSGF--FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV S V+ +D + F Sbjct: 222 YDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|198242766|ref|YP_002217283.1| toluene ABC transporter permease [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197937282|gb|ACH74615.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] Length = 260 Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 73/218 (33%), Positives = 118/218 (54%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y VGV + ++I+ G V+ QG L+ + AE L+++ LRE+G ++ Sbjct: 44 LVRQLYNVGVLSMLIIIVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ AGR+GSA+ AEIG M+ E++ ++ M +D +R +ISPR WA +ISLPLLTI+ Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFV 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 I G S+ V WK D F F+S + ++ LIK+ A + +A+ G Sbjct: 164 AVGIWGGSLVGVSWKGIDAGF--FWSVMQNAVDWRMDLVNCLIKSVVFAITVTWIALFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV + V+ +D + F Sbjct: 222 YDAIPTSAGISRATTRTVVHASLAVLGLDFVLTALMFG 259 >gi|330501880|ref|YP_004378749.1| hypothetical protein MDS_0966 [Pseudomonas mendocina NK-01] gi|328916166|gb|AEB56997.1| hypothetical protein MDS_0966 [Pseudomonas mendocina NK-01] Length = 265 Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 61/216 (28%), Positives = 124/216 (57%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q++ VGV + ++++ G V+A QG L +G+E ++++ LRE+G ++ Sbjct: 48 LIKQLFAVGVMSLAIIVVSGIFIGMVLALQGYNILVSYGSEQAVGQMVALTLLRELGPVV 107 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA IS+PLL ++ + Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPLLAMIFS 167 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334 I G ++V + + F++ ++ + ++ G+IK+ A + +A+ +G+ Sbjct: 168 VVGIWGGAMVAVDWLGVYEGSFWANMQNSVSFYDDVLNGVIKSIVFAFVVTWIAVFQGYD 227 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 228 CEPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 263 >gi|167645294|ref|YP_001682957.1| hypothetical protein Caul_1329 [Caulobacter sp. K31] gi|167347724|gb|ABZ70459.1| protein of unknown function DUF140 [Caulobacter sp. K31] Length = 270 Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 69/217 (31%), Positives = 112/217 (51%) Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211 FL L RQ +G +PVV L + TGA +A +F AE ++++ RE+ Sbjct: 49 FLGQLWRQFVAIGFFSLPVVGLTAVFTGAALALNIFTGGGRFNAEQVMPQIVALGITREL 108 Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271 G +L A+M+AGR +AI AEIG+M+ E+IDA+RT+ D R L+ PR+ A ++ LP+LT Sbjct: 109 GPVLAALMLAGRVSAAIAAEIGAMRATEQIDAMRTLSTDPFRYLVGPRLLAGVLMLPILT 168 Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 +A+ + G +V + D AV+ ++ +GLIKA + ++ Sbjct: 169 AVADTIGVAGGWLVATRVLDFSSAVYIRNTLDFLQGWDVISGLIKAAVFGFIVALMGCYH 228 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 G+ + +G+ T VV S ++ D L F+ Sbjct: 229 GYNAKGGARGVGRATTHAVVSSAILIFASDYLLTTFF 265 >gi|15599651|ref|NP_253145.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|107099960|ref|ZP_01363878.1| hypothetical protein PaerPA_01000981 [Pseudomonas aeruginosa PACS2] gi|116052487|ref|YP_792800.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14] gi|218893546|ref|YP_002442415.1| putative permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254238883|ref|ZP_04932206.1| hypothetical protein PACG_05051 [Pseudomonas aeruginosa C3719] gi|254244732|ref|ZP_04938054.1| hypothetical protein PA2G_05604 [Pseudomonas aeruginosa 2192] gi|296391165|ref|ZP_06880640.1| putative ABC transport system permease protein [Pseudomonas aeruginosa PAb1] gi|313107040|ref|ZP_07793243.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016] gi|9950690|gb|AAG07843.1|AE004859_12 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|115587708|gb|ABJ13723.1| putative toluene tolerance ABC efflux transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|126170814|gb|EAZ56325.1| hypothetical protein PACG_05051 [Pseudomonas aeruginosa C3719] gi|126198110|gb|EAZ62173.1| hypothetical protein PA2G_05604 [Pseudomonas aeruginosa 2192] gi|218773774|emb|CAW29588.1| probable permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|310879745|gb|EFQ38339.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016] Length = 265 Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 60/216 (27%), Positives = 121/216 (56%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y VGV + ++++ G V+A QG L +G+E ++++ LRE+G ++ Sbjct: 48 LVKQLYSVGVLSLAIIVVSGLFIGMVLALQGYNILISYGSEQAVGQMVALTLLRELGPVV 107 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 T ++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA IS+PLL + + Sbjct: 108 TGLLFAGRAGSALTAEIGNMKATEQLSSLEMIGVDPLKYIVAPRLWAGFISMPLLAAIFS 167 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G ++V + + F++ ++ ++ G+IK+ A + +A+ +G+ Sbjct: 168 VVGIWGGAMVAVDWLGVYEGSFWANMQNSVQFTEDVLNGVIKSIVFAFVVTWIAVYQGYD 227 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 228 CEPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 263 >gi|269137863|ref|YP_003294563.1| putative transport protein [Edwardsiella tarda EIB202] gi|267983523|gb|ACY83352.1| putative transport protein [Edwardsiella tarda EIB202] gi|304557916|gb|ADM40580.1| hypothetical protein ETAF_0456 [Edwardsiella tarda FL6-60] Length = 260 Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 73/219 (33%), Positives = 118/219 (53%), Gaps = 7/219 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 L RQ+Y VGV + ++I+ G V+ QG L+ + AE S+ +M L L RE+G + Sbjct: 44 LRRQLYSVGVQSLLIIIVSGLFIGMVLGLQGYLVLTTYSAEA-SLGMMVALSLLRELGPV 102 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +++PR WA +IS+PLLT++ Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLTVIF 162 Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331 I G S+ V WK D F F+S ++ LIK+ A + +A+ Sbjct: 163 VAVGIWGGSVVGVDWKGIDAGF--FWSAMQGAVDYRTDLLNCLIKSLVFAITVMWIALFN 220 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+ S + + T VV + V+ +D + F Sbjct: 221 GYDAVPTSAGISRATTRTVVHASLAVLGLDFVLTALMFG 259 >gi|157372592|ref|YP_001480581.1| hypothetical protein Spro_4359 [Serratia proteamaculans 568] gi|157324356|gb|ABV43453.1| protein of unknown function DUF140 [Serratia proteamaculans 568] Length = 260 Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 73/219 (33%), Positives = 119/219 (54%), Gaps = 7/219 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 L++QM+ VGV + ++++ G V+ QG L+ + AE S+ +M L L RE+G + Sbjct: 44 LLKQMHSVGVQSLLIIMVSGLFIGMVLGLQGYLVLTTYSAEA-SLGMMVALSLLRELGPV 102 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGR+GSA+ AEIG MK E+I ++ M +D +R +++PR WA +IS+PLLT++ Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLRRIVAPRFWAGLISMPLLTLIF 162 Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331 I G SI V WK D F F+S ++ L+K+ A + +A+ Sbjct: 163 VAIGIWGGSIVGVDWKGIDGGF--FWSAMQGAVEWKKDLLNCLLKSVVFAITVTWIAIFN 220 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+ S + + T VV S V+ +D + F Sbjct: 221 GYDAVPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|332178184|gb|AEE13873.1| protein of unknown function DUF140 [Thermodesulfobium narugense DSM 14796] Length = 250 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 70/223 (31%), Positives = 120/223 (53%), Gaps = 2/223 (0%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 +F+ FL + Q + +GV VP+V + S G V A Q A + +GA ++ I Sbjct: 29 RFRFFLF--LDQCFMIGVESVPIVFITSLFVGMVFAIQTAREFVFYGAGSVVGGVVGIAI 86 Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267 +RE+G ++T V++AGR GSA+ AEIG+MK+ E+IDA+ +M +D + L++PR++A ++ L Sbjct: 87 IRELGPMITGVVVAGRVGSAMAAEIGTMKVTEQIDALLSMSVDPIFYLVAPRVFACMLML 146 Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327 PLLT++AN + +IG V Y + + F + +I LIKA I ++ Sbjct: 147 PLLTVIANLAGVIGGYFVAVYYGGVIPSSFVESVRFLVKVWDIEASLIKAMIFGSIISLI 206 Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G + +G VV S+ ++ I + ++ F+ Sbjct: 207 GTFIGLRTKAGARGVGNSTMLSVVISLILIFIFNYFLSMVMFS 249 >gi|294084216|ref|YP_003550974.1| organic solvents resistance ABC transporter [Candidatus Puniceispirillum marinum IMCC1322] gi|292663789|gb|ADE38890.1| ABC-type transport system involved in resistance to organic solvents [Candidatus Puniceispirillum marinum IMCC1322] Length = 258 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 65/218 (29%), Positives = 117/218 (53%), Gaps = 4/218 (1%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L RQ +G +PVV L + +G V+A Q ++F AE ++ + RE+G +L Sbjct: 43 LWRQTLDIGYYSLPVVGLTTLFSGMVLALQSYTGFARFSAEDTVATVVVLSVTRELGPVL 102 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 +M+AGR G+++ AEIG+M++ ++IDA+ T+ ++ L++PRI A + LP L ++ + Sbjct: 103 AGLMVAGRIGASMAAEIGTMRVTDQIDALDTLSTRPMQYLVAPRIMAGTLCLPFLVLIGD 162 Query: 276 FSAIIGASIVIWKYYDIPF--AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 + G IV Y + F +++ SR +++I GL+KA I ++ G+ Sbjct: 163 IIGVFGGYIV--GVYRLGFNPSIYLSRTLEYLEVSDITLGLVKAAVFGFLIALMGCYHGY 220 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 G + +G+ T VV S +++I + L YF + Sbjct: 221 HSGRGAEGVGRATTNAVVSSSILILIANYLVTALYFGV 258 >gi|116331506|ref|YP_801224.1| membrane protein of an ABC transporter complex [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116125195|gb|ABJ76466.1| Membrane protein of an ABC transporter complex [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 259 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 67/207 (32%), Positives = 108/207 (52%), Gaps = 4/207 (1%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 ++ QMY GV + VV +++ TG +++ L FGAE LM+I RE+ + Sbjct: 40 ILDQMYITGVGSISVVSIVAIFTGMIMSLNTGLGLKDFGAEGQIGLLMTITLTREMSPFM 99 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA+++A GSA+ AEIG+MKI+EEIDA+ M +D VR LI PRI I +P+L + + Sbjct: 100 TALILAASIGSAMAAEIGTMKISEEIDALEVMSIDPVRYLIFPRILGFSIMVPVLCVYST 159 Query: 276 FSAIIGASIVIWKYYDIPFAVF----FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 I+G +IV + I + + F R S L +++ G++K + ++ Sbjct: 160 ILGILGGAIVGYFQLGIDYFTYFRDVFDRVASIPGLKDLYVGILKGFIFGVIVSAISCSH 219 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVI 358 G + +G+ VV S +VI Sbjct: 220 GLRTSGGAIGVGRATRESVVTSFLMVI 246 >gi|148263953|ref|YP_001230659.1| hypothetical protein Gura_1896 [Geobacter uraniireducens Rf4] gi|146397453|gb|ABQ26086.1| protein of unknown function DUF140 [Geobacter uraniireducens Rf4] Length = 258 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 65/210 (30%), Positives = 117/210 (55%), Gaps = 1/210 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 ++Q+Y+ G+ + V+++IS G VI Q L G EI + ++ + +RE+G LLT Sbjct: 46 MKQVYFTGLEALKVIVVISLTIGVVIITQ-IISLVGAGNEILTGKVLIWVVIRELGPLLT 104 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A+++ RSG+AI E+G MKIN EI++I ++G+ + LI PRI+ + ++ +LTI Sbjct: 105 AIVVIARSGTAIATELGYMKINNEIESIESLGIPAGQYLIMPRIFGVTTAVMILTIYFEI 164 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 ++I G IV + +PF F ++ TL + + K+ F + K+G VG Sbjct: 165 ASIFGGFIVASIGWHVPFDRFSEGVFTSLTLKELGRSVAKSFFFGLFLSAACCKQGLGVG 224 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + + + T V+QS+ +V ++D + + Sbjct: 225 KSATQIPQAATKGVMQSLFLVFLLDGIITV 254 >gi|239994339|ref|ZP_04714863.1| putative transport protein (ABC superfamily, membrane) [Alteromonas macleodii ATCC 27126] Length = 258 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 66/217 (30%), Positives = 122/217 (56%), Gaps = 1/217 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +I+Q+Y VGV + ++++ G V+A QG L +GAE ++++ LRE+G ++ Sbjct: 41 VIKQLYVVGVQSLLIIMVSGLFIGMVMALQGYTILVDYGAEGSLGPMVALSLLRELGPVV 100 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +++PR WA ++++P+L I+ + Sbjct: 101 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRIVAPRFWAGMLAMPMLAIIFS 160 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334 I+G +V + + ++S ST ++ G+IK+ A + +A+ +G+ Sbjct: 161 AIGILGGHLVGVDWLGVDAGSYWSIMQSTVDWNQDVINGVIKSLVFALVVTWIAIFKGYD 220 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 S + K T VV S V+ +D + F I Sbjct: 221 SIPTSEGISKATTETVVYSSLAVLGLDFVLTALMFGI 257 >gi|152985726|ref|YP_001350363.1| ABC transporter permease [Pseudomonas aeruginosa PA7] gi|150960884|gb|ABR82909.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7] Length = 265 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 60/216 (27%), Positives = 121/216 (56%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y VGV + ++++ G V+A QG L +G+E ++++ LRE+G ++ Sbjct: 48 LVKQLYSVGVLSLAIIVVSGLFIGMVLALQGYNILISYGSEQAVGQMVALTLLRELGPVV 107 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 T ++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA IS+PLL + + Sbjct: 108 TGLLFAGRAGSALTAEIGNMKATEQLSSLEMIGVDPLKYIVAPRLWAGFISMPLLAAIFS 167 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G ++V + + F++ ++ ++ G+IK+ A + +A+ +G+ Sbjct: 168 VVGIWGGAMVAVDWLGVYEGSFWANMQNSVQFTEDVLNGVIKSIVFAFVVTWIAVYQGYD 227 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 228 CEPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 263 >gi|193065385|ref|ZP_03046456.1| toluene ABC transporter, permease protein [Escherichia coli E22] gi|192927026|gb|EDV81649.1| toluene ABC transporter, permease protein [Escherichia coli E22] Length = 260 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 71/218 (32%), Positives = 118/218 (54%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y VGV + ++++ G V+ QG L+ + AE L+++ LRE+G ++ Sbjct: 44 LVRQLYNVGVLSMLIIVVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ AGR+GSA+ AEIG M+ E++ ++ M +D +R +ISPR WA +ISLPLLT++ Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFV 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 I G S+ V WK D F F+S + ++ LIK+ A + +++ G Sbjct: 164 AVGIWGGSLVGVSWKGIDSGF--FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV S V+ +D + F Sbjct: 222 YDAIPTSAGISRATTRTVVHSSLAVLGVDFVLTALMFG 259 >gi|190343261|gb|ACE75649.1| ABC transporter permease protein [Candidatus Nitrospira defluvii] Length = 259 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 107/206 (51%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+ + GV +PV +I+ + G +I Q QL + GA ++ + +RE+G L+ Sbjct: 45 LVRQILFTGVDALPVTTVIALLLGIIIVTQAGTQLPRLGAGGLVGSIIVVTVIRELGPLI 104 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA ++ GRSG+AI E+G+M + E+ A+R MG+ R +I PR+ +++S+ LT+ + Sbjct: 105 TAFIVVGRSGTAIATELGNMSVTREVVALRLMGISISRFVIMPRMVGMVLSMLCLTLYFD 164 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 A++G ++ IPF F + ++ IK A+ + G AV Sbjct: 165 VVAVLGGYLIADAQLTIPFYAFVESITKALSTTDVLMTAIKGLSFGSAVAAICCYHGLAV 224 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361 + ++ T ++ S + ++ID Sbjct: 225 RSSFTEVPQQTTRAMINSFVLCLLID 250 >gi|261344896|ref|ZP_05972540.1| toluene tolerance ABC efflux transporter, permease [Providencia rustigianii DSM 4541] gi|282567036|gb|EFB72571.1| toluene tolerance ABC efflux transporter, permease [Providencia rustigianii DSM 4541] Length = 260 Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 75/210 (35%), Positives = 117/210 (55%), Gaps = 7/210 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 L++Q+Y VGV + +V + G V+ QG L+ F AE S+ +M L L RE+G + Sbjct: 44 LMQQLYSVGVQSLLIVAVSGLFIGMVLGLQGYLVLTTFSAEA-SLGMMVALSLLRELGPV 102 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGR+GSA+ AEIG MK E+I ++ M +D +R +I+PR WA IS+PLL+++ Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLRRVIAPRFWAGFISMPLLSLIF 162 Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKE 331 IIG +I V WK D F F+S S+ +I IK+ A + +A+ Sbjct: 163 VAVGIIGGAIVGVDWKGIDPGF--FWSSMQSSIEWRLDIVNCFIKSLVFAITVTWIALFN 220 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 G+ S + + T VV + V+ +D Sbjct: 221 GYDAIPTSEGISRATTKTVVHASLSVLGLD 250 >gi|91215888|ref|ZP_01252857.1| ABC transporter permease protein [Psychroflexus torquis ATCC 700755] gi|91185865|gb|EAS72239.1| ABC transporter permease protein [Psychroflexus torquis ATCC 700755] Length = 262 Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 69/221 (31%), Positives = 120/221 (54%), Gaps = 4/221 (1%) Query: 141 EFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSI 200 E S +++K LIRQ + +G +V + F+ G V Q L +FGA + Sbjct: 33 EVVTSPFEWK----ELIRQCFQMGNRSFLLVGVTGFILGLVFTLQSRPTLLEFGAVSWMP 88 Query: 201 DLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRI 260 ++SI +REIG ++ A++ AGR GS+I AE+GSMK+ E+IDA+ G + + L+ RI Sbjct: 89 SMVSISIVREIGPVIIALICAGRIGSSIGAELGSMKVTEQIDAMEVSGTNPFKYLVVTRI 148 Query: 261 WALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320 A + LPLL I+ + A+ G++IV ++ + ++F++ ++I IK+ F Sbjct: 149 LATTLMLPLLIIMGDAVALFGSAIVENLMGEVSYLLYFNKVFDALKFSDIIPATIKSFFF 208 Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 AIG+V +G+ + +G+ VV + ++ +ID Sbjct: 209 GFAIGLVGCYKGYNCSKGTVGVGEASNAAVVYTSMLLFVID 249 >gi|74313731|ref|YP_312150.1| hypothetical protein SSON_3342 [Shigella sonnei Ss046] gi|73857208|gb|AAZ89915.1| conserved hypothetical protein [Shigella sonnei Ss046] Length = 260 Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 71/218 (32%), Positives = 118/218 (54%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y VGV + ++++ G V+ QG L+ + AE L+++ LRE+G ++ Sbjct: 44 LVRQLYNVGVLSMLIIVVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ AGR+GSA+ AEIG M+ E++ ++ M +D +R +ISPR WA +ISLPLLT++ Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFV 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 I G S+ V WK D F F+S + ++ LIK+ A + +++ G Sbjct: 164 AVGIWGGSLVGVSWKGIDSGF--FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV S V+ +D + F Sbjct: 222 YDTIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|220904331|ref|YP_002479643.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868630|gb|ACL48965.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 375 Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 78/289 (26%), Positives = 139/289 (48%), Gaps = 9/289 (3%) Query: 78 IEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVIS 137 +E+L L K ++K + F + + ++ F+N +G V Sbjct: 89 LERLLKLAFAVPAKAGSDRKKEELNFVQRVGQVAIDLPPRVTDFLN-------FVGDVTL 141 Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 G + + L+ M GV +P++ + S + G ++A GA QL+QFGA+I Sbjct: 142 AVGRLFVGRTQMRP--QDLLAAMQECGVQALPIISITSMLFGLILAFVGAVQLTQFGAQI 199 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 + L+ I LR +G ++ V++AGR G+A A IG+M++NEE+DA+ T+G+ V L+ Sbjct: 200 YVAGLVGIGMLRVMGAVMVGVVMAGRVGAAYAALIGTMQVNEEVDALATLGIAPVDFLVL 259 Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 PR+ AL +PLLT+ A+ ++G IV +I + + ++F GL Sbjct: 260 PRVVALTAMIPLLTLYADLMGVVGGYIVATTMLNINPMEYINATMQMVPYKHVFIGLAYG 319 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 I + +G G + ++G TT VV +I +I+ ++ + Sbjct: 320 TVFGVIIAMTGCYQGMRCGRSAQAVGLATTTAVVHAIVGIIVATAVITV 368 >gi|325579009|ref|ZP_08148965.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Haemophilus parainfluenzae ATCC 33392] gi|325159244|gb|EGC71378.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Haemophilus parainfluenzae ATCC 33392] Length = 261 Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 75/260 (28%), Positives = 134/260 (51%), Gaps = 8/260 (3%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 +G+ ++KF +L G K F L L++Q++ +GV + +++L Sbjct: 9 LGRSVIKFFRALGRSGFML------FGALVGKPQVRKHFPL-LVKQLHVLGVQSLLIILL 61 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GSA+ AEIG Sbjct: 62 SGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIG 121 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 MK E++ ++ M +D +R +I+PR WA +I++P+L +L I G ++V + + Sbjct: 122 LMKATEQLSSLEMMAVDPLRRVIAPRFWAGLIAMPILALLFTAIGIWGGALVGVDWKGVD 181 Query: 294 FAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 F+S + + + +I G IK+ F A A+ +A+ G+ S + + T VV Sbjct: 182 AGSFWSVMQNAVSWSYDILNGFIKSVFFAIAVVWIALFNGYDCIPTSEGISQATTRTVVH 241 Query: 353 SISIVIIIDSLFAIFYFAIG 372 + +V+ +D + F G Sbjct: 242 ASLVVLGLDFILTAIMFGAG 261 >gi|320322486|gb|EFW78579.1| putative ABC transport system permease protein [Pseudomonas syringae pv. glycinea str. B076] Length = 265 Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 126/216 (58%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y VGV + ++++ G V+A QG L+++G+E ++++ LRE+G ++ Sbjct: 48 LVRQLYSVGVVSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVV 107 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA IS+P+L ++ + Sbjct: 108 TALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFS 167 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFA 334 I GAS V + + F+S ++ + N + G+IK+ A + +A+ +G+ Sbjct: 168 VVGIWGASWVAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYD 227 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 228 CEPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 263 >gi|320174559|gb|EFW49695.1| Uncharacterized ABC transporter, permease component YrbE [Shigella dysenteriae CDC 74-1112] Length = 260 Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 71/218 (32%), Positives = 118/218 (54%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y VGV + ++++ G V+ QG L+ + AE L+++ LRE+G ++ Sbjct: 44 LVRQLYNVGVLSMLIIVVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ AGR+GSA+ AEIG M+ E++ ++ M +D +R +ISPR WA +ISLPLLT++ Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFV 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 I G S+ V WK D F F+S + ++ LIK+ A + +++ G Sbjct: 164 AVGIWGGSLVGVSWKGIDSGF--FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV S V+ +D + F Sbjct: 222 YDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|309785522|ref|ZP_07680153.1| toluene tolerance protein Ttg2B [Shigella dysenteriae 1617] gi|308926642|gb|EFP72118.1| toluene tolerance protein Ttg2B [Shigella dysenteriae 1617] Length = 235 Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 72/218 (33%), Positives = 118/218 (54%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y VGV + ++++ G V+ QG L+ + AE L+++ LRE+G ++ Sbjct: 19 LVRQLYNVGVLSMLIIVVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 78 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ AGR+GSA+ AEIG M+ E++ ++ M +D +R +ISPR WA +ISLPLLTI+ Sbjct: 79 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFV 138 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 I G S+ V WK D F F+S + ++ LIK+ A + +++ G Sbjct: 139 AVGIWGGSLVGVSWKGIDSGF--FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNG 196 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV S V+ +D + F Sbjct: 197 YDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 234 >gi|238751354|ref|ZP_04612847.1| hypothetical protein yrohd0001_15400 [Yersinia rohdei ATCC 43380] gi|238710412|gb|EEQ02637.1| hypothetical protein yrohd0001_15400 [Yersinia rohdei ATCC 43380] Length = 260 Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 72/219 (32%), Positives = 119/219 (54%), Gaps = 7/219 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 L++Q+Y VGV + ++++ G V+ QG L+ + AE S+ +M L L RE+G + Sbjct: 44 LVKQLYSVGVQSLLIIVVSGLFIGMVLGLQGFLILTTYSAEA-SLGMMVALSLLRELGPV 102 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGR+GSA+ AEIG MK E+I ++ M +D +R +++PR WA +IS+PLLT + Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIF 162 Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331 I G ++ V WK D F F+S + ++ LIK+ A + +A+ Sbjct: 163 VAVGIWGGAVVGVDWKGIDGGF--FWSAMQNAVEWRTDLLNCLIKSLVFAITVTWIALFN 220 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+ S + + T VV S V+ +D + F Sbjct: 221 GYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|15803734|ref|NP_289768.1| hypothetical protein Z4557 [Escherichia coli O157:H7 EDL933] gi|15833327|ref|NP_312100.1| hypothetical protein ECs4073 [Escherichia coli O157:H7 str. Sakai] gi|16131084|ref|NP_417661.1| ABC transporter maintaining OM lipid asymmetry, inner membrane permease protein [Escherichia coli str. K-12 substr. MG1655] gi|24114483|ref|NP_708993.1| integral membrane protein [Shigella flexneri 2a str. 301] gi|26249780|ref|NP_755820.1| hypothetical protein c3954 [Escherichia coli CFT073] gi|30064532|ref|NP_838703.1| integral membrane protein [Shigella flexneri 2a str. 2457T] gi|82545568|ref|YP_409515.1| hypothetical protein SBO_3188 [Shigella boydii Sb227] gi|89109957|ref|AP_003737.1| predicted toluene transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|91212619|ref|YP_542605.1| hypothetical protein UTI89_C3630 [Escherichia coli UTI89] gi|110643434|ref|YP_671164.1| hypothetical protein ECP_3281 [Escherichia coli 536] gi|110807060|ref|YP_690580.1| integral membrane protein [Shigella flexneri 5 str. 8401] gi|117625486|ref|YP_858809.1| putative toluene transporter subunit: permease component [Escherichia coli APEC O1] gi|157156689|ref|YP_001464672.1| toluene ABC transporter, permease protein [Escherichia coli E24377A] gi|157162678|ref|YP_001459996.1| toluene ABC transporter, permease protein [Escherichia coli HS] gi|168751600|ref|ZP_02776622.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4113] gi|168754176|ref|ZP_02779183.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4401] gi|168763731|ref|ZP_02788738.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4501] gi|168769050|ref|ZP_02794057.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4486] gi|168777249|ref|ZP_02802256.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4196] gi|168781338|ref|ZP_02806345.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4076] gi|168786080|ref|ZP_02811087.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC869] gi|168800908|ref|ZP_02825915.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC508] gi|170018556|ref|YP_001723510.1| hypothetical protein EcolC_0506 [Escherichia coli ATCC 8739] gi|170082728|ref|YP_001732048.1| toluene ABC transporter membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|170684208|ref|YP_001745466.1| toluene ABC transporter permease [Escherichia coli SMS-3-5] gi|187733158|ref|YP_001881891.1| toluene ABC transporter permease [Shigella boydii CDC 3083-94] gi|188492313|ref|ZP_02999583.1| toluene ABC transporter, permease protein [Escherichia coli 53638] gi|191168635|ref|ZP_03030417.1| toluene ABC transporter, permease protein [Escherichia coli B7A] gi|191174475|ref|ZP_03035975.1| toluene ABC transporter, permease protein [Escherichia coli F11] gi|193070286|ref|ZP_03051229.1| toluene ABC transporter, permease protein [Escherichia coli E110019] gi|194429132|ref|ZP_03061662.1| toluene ABC transporter, permease protein [Escherichia coli B171] gi|194434508|ref|ZP_03066768.1| toluene ABC transporter, permease protein [Shigella dysenteriae 1012] gi|194439172|ref|ZP_03071253.1| toluene ABC transporter, permease protein [Escherichia coli 101-1] gi|195940050|ref|ZP_03085432.1| toluene ABC transporter membrane protein [Escherichia coli O157:H7 str. EC4024] gi|208805807|ref|ZP_03248144.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4206] gi|208814152|ref|ZP_03255481.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4045] gi|208818401|ref|ZP_03258721.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4042] gi|209399676|ref|YP_002272664.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4115] gi|209920669|ref|YP_002294753.1| putative ABC transporter permease [Escherichia coli SE11] gi|215488510|ref|YP_002330941.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|217327544|ref|ZP_03443627.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. TW14588] gi|218555764|ref|YP_002388677.1| toluene ABC transporter membrane protein [Escherichia coli IAI1] gi|218560264|ref|YP_002393177.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli S88] gi|218691484|ref|YP_002399696.1| toluene ABC transporter membrane protein [Escherichia coli ED1a] gi|218696899|ref|YP_002404566.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli 55989] gi|218701963|ref|YP_002409592.1| toluene ABC transporter membrane protein [Escherichia coli IAI39] gi|218706814|ref|YP_002414333.1| toluene ABC transporter membrane protein [Escherichia coli UMN026] gi|227887915|ref|ZP_04005720.1| ABC superfamily ATP binding cassette transporter, membrane protein [Escherichia coli 83972] gi|237706054|ref|ZP_04536535.1| integral membrane protein [Escherichia sp. 3_2_53FAA] gi|238902296|ref|YP_002928092.1| putative toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli BW2952] gi|253771972|ref|YP_003034803.1| hypothetical protein ECBD_0548 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254038359|ref|ZP_04872417.1| toluene ABC transporter membrane protein [Escherichia sp. 1_1_43] gi|254163136|ref|YP_003046244.1| putative toluene transporter subunit membrane component of ABC superfamily [Escherichia coli B str. REL606] gi|254795143|ref|YP_003079980.1| putative toluene ABC transporter membrane protein [Escherichia coli O157:H7 str. TW14359] gi|256018887|ref|ZP_05432752.1| predicted toluene transporter subunit: membrane component of ABC superfamily protein [Shigella sp. D9] gi|256024231|ref|ZP_05438096.1| predicted toluene transporter subunit: membrane component of ABC superfamily protein [Escherichia sp. 4_1_40B] gi|260846007|ref|YP_003223785.1| putative toluene transporter subunit [Escherichia coli O103:H2 str. 12009] gi|260857321|ref|YP_003231212.1| putative toluene transporter subunit [Escherichia coli O26:H11 str. 11368] gi|260869945|ref|YP_003236347.1| putative toluene transporter subunit [Escherichia coli O111:H- str. 11128] gi|261228205|ref|ZP_05942486.1| predicted toluene transporter subunit: membrane component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK2000] gi|261255061|ref|ZP_05947594.1| putative toluene transporter subunit [Escherichia coli O157:H7 str. FRIK966] gi|291284568|ref|YP_003501386.1| hypothetical protein G2583_3919 [Escherichia coli O55:H7 str. CB9615] gi|293406803|ref|ZP_06650729.1| ABC transporter [Escherichia coli FVEC1412] gi|293412565|ref|ZP_06655288.1| conserved hypothetical protein [Escherichia coli B354] gi|293416623|ref|ZP_06659262.1| inner membrane protein yrbE [Escherichia coli B185] gi|293449527|ref|ZP_06663948.1| UPF0393 inner membrane protein yrbE [Escherichia coli B088] gi|298382544|ref|ZP_06992141.1| ABC transport system permease [Escherichia coli FVEC1302] gi|300817551|ref|ZP_07097767.1| toluene tolerance protein Ttg2B [Escherichia coli MS 107-1] gi|300823840|ref|ZP_07103964.1| toluene tolerance protein Ttg2B [Escherichia coli MS 119-7] gi|300897962|ref|ZP_07116338.1| toluene tolerance protein Ttg2B [Escherichia coli MS 198-1] gi|300904386|ref|ZP_07122234.1| toluene tolerance protein Ttg2B [Escherichia coli MS 84-1] gi|300918956|ref|ZP_07135511.1| toluene tolerance protein Ttg2B [Escherichia coli MS 115-1] gi|300926061|ref|ZP_07141883.1| toluene tolerance protein Ttg2B [Escherichia coli MS 182-1] gi|300929890|ref|ZP_07145332.1| toluene tolerance protein Ttg2B [Escherichia coli MS 187-1] gi|300938110|ref|ZP_07152884.1| toluene tolerance protein Ttg2B [Escherichia coli MS 21-1] gi|300948849|ref|ZP_07162914.1| toluene tolerance protein Ttg2B [Escherichia coli MS 116-1] gi|300955783|ref|ZP_07168125.1| toluene tolerance protein Ttg2B [Escherichia coli MS 175-1] gi|300979957|ref|ZP_07174809.1| toluene tolerance protein Ttg2B [Escherichia coli MS 200-1] gi|300990924|ref|ZP_07179376.1| toluene tolerance protein Ttg2B [Escherichia coli MS 45-1] gi|301022096|ref|ZP_07186022.1| toluene tolerance protein Ttg2B [Escherichia coli MS 69-1] gi|301025904|ref|ZP_07189391.1| toluene tolerance protein Ttg2B [Escherichia coli MS 196-1] gi|301047959|ref|ZP_07195004.1| toluene tolerance protein Ttg2B [Escherichia coli MS 185-1] gi|301306740|ref|ZP_07212794.1| toluene tolerance protein Ttg2B [Escherichia coli MS 124-1] gi|301326373|ref|ZP_07219737.1| toluene tolerance protein Ttg2B [Escherichia coli MS 78-1] gi|301644908|ref|ZP_07244877.1| toluene tolerance protein Ttg2B [Escherichia coli MS 146-1] gi|306816464|ref|ZP_07450596.1| toluene ABC transporter, permease protein [Escherichia coli NC101] gi|307139880|ref|ZP_07499236.1| toluene ABC transporter, permease protein [Escherichia coli H736] gi|307313101|ref|ZP_07592727.1| protein of unknown function DUF140 [Escherichia coli W] gi|309793773|ref|ZP_07688199.1| toluene tolerance protein Ttg2B [Escherichia coli MS 145-7] gi|312968467|ref|ZP_07782676.1| toluene tolerance protein Ttg2B [Escherichia coli 2362-75] gi|312972532|ref|ZP_07786706.1| toluene tolerance protein Ttg2B [Escherichia coli 1827-70] gi|331643892|ref|ZP_08345023.1| putative ABC superfamily (membrane) transport protein [Escherichia coli H736] gi|331648994|ref|ZP_08350082.1| putative ABC superfamily (membrane) transport protein [Escherichia coli M605] gi|331654798|ref|ZP_08355798.1| putative ABC superfamily (membrane) transport protein [Escherichia coli M718] gi|331659481|ref|ZP_08360423.1| putative ABC superfamily (membrane) transport protein [Escherichia coli TA206] gi|331664807|ref|ZP_08365712.1| putative ABC superfamily (membrane) transport protein [Escherichia coli TA143] gi|331670021|ref|ZP_08370866.1| putative ABC superfamily (membrane) transport protein [Escherichia coli TA271] gi|331674724|ref|ZP_08375483.1| putative ABC superfamily (membrane) transport protein [Escherichia coli TA280] gi|331679273|ref|ZP_08379945.1| putative ABC superfamily (membrane) transport protein [Escherichia coli H591] gi|331684841|ref|ZP_08385433.1| putative ABC superfamily (membrane) transport protein [Escherichia coli H299] gi|54040598|sp|P64607|MLAE_ECOL6 RecName: Full=Probable phospholipid ABC transporter permease protein mlaE gi|54040599|sp|P64608|MLAE_ECO57 RecName: Full=Probable phospholipid ABC transporter permease protein mlaE gi|54040600|sp|P64609|MLAE_SHIFL RecName: Full=Probable phospholipid ABC transporter permease protein mlaE gi|54042861|sp|P64606|MLAE_ECOLI RecName: Full=Probable phospholipid ABC transporter permease protein mlaE gi|12517809|gb|AAG58328.1|AE005547_14 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] gi|26110208|gb|AAN82394.1|AE016767_154 Hypothetical protein yrbE [Escherichia coli CFT073] gi|606132|gb|AAA57995.1| ORF_f260 [Escherichia coli str. K-12 substr. MG1655] gi|1789585|gb|AAC76226.1| ABC transporter maintaining OM lipid asymmetry, inner membrane permease protein [Escherichia coli str. K-12 substr. MG1655] gi|13363546|dbj|BAB37496.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|24053666|gb|AAN44700.1| integral membrane protein [Shigella flexneri 2a str. 301] gi|30042791|gb|AAP18514.1| integral membrane protein [Shigella flexneri 2a str. 2457T] gi|81246979|gb|ABB67687.1| conserved hypothetical protein [Shigella boydii Sb227] gi|85675988|dbj|BAE77238.1| predicted toluene transporter subunit [Escherichia coli str. K12 substr. W3110] gi|91074193|gb|ABE09074.1| hypothetical protein UTI89_C3630 [Escherichia coli UTI89] gi|110345026|gb|ABG71263.1| putative membrane protein [Escherichia coli 536] gi|110616608|gb|ABF05275.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] gi|115514610|gb|ABJ02685.1| putative toluene transporter subunit: permease component [Escherichia coli APEC O1] gi|157068358|gb|ABV07613.1| toluene ABC transporter, permease protein [Escherichia coli HS] gi|157078719|gb|ABV18427.1| toluene ABC transporter, permease protein [Escherichia coli E24377A] gi|169753484|gb|ACA76183.1| protein of unknown function DUF140 [Escherichia coli ATCC 8739] gi|169890563|gb|ACB04270.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|170521926|gb|ACB20104.1| toluene ABC transporter, permease protein [Escherichia coli SMS-3-5] gi|187430150|gb|ACD09424.1| toluene ABC transporter, permease protein [Shigella boydii CDC 3083-94] gi|187767468|gb|EDU31312.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4196] gi|188014389|gb|EDU52511.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4113] gi|188487512|gb|EDU62615.1| toluene ABC transporter, permease protein [Escherichia coli 53638] gi|189001139|gb|EDU70125.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4076] gi|189358631|gb|EDU77050.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4401] gi|189361791|gb|EDU80210.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4486] gi|189366134|gb|EDU84550.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4501] gi|189373916|gb|EDU92332.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC869] gi|189376865|gb|EDU95281.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC508] gi|190901329|gb|EDV61096.1| toluene ABC transporter, permease protein [Escherichia coli B7A] gi|190905230|gb|EDV64869.1| toluene ABC transporter, permease protein [Escherichia coli F11] gi|192956345|gb|EDV86805.1| toluene ABC transporter, permease protein [Escherichia coli E110019] gi|194412857|gb|EDX29149.1| toluene ABC transporter, permease protein [Escherichia coli B171] gi|194417287|gb|EDX33396.1| toluene ABC transporter, permease protein [Shigella dysenteriae 1012] gi|194421868|gb|EDX37874.1| toluene ABC transporter, permease protein [Escherichia coli 101-1] gi|208725608|gb|EDZ75209.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4206] gi|208735429|gb|EDZ84116.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4045] gi|208738524|gb|EDZ86206.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4042] gi|209161076|gb|ACI38509.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4115] gi|209758098|gb|ACI77361.1| hypothetical protein ECs4073 [Escherichia coli] gi|209758100|gb|ACI77362.1| hypothetical protein ECs4073 [Escherichia coli] gi|209758102|gb|ACI77363.1| hypothetical protein ECs4073 [Escherichia coli] gi|209758104|gb|ACI77364.1| hypothetical protein ECs4073 [Escherichia coli] gi|209758106|gb|ACI77365.1| hypothetical protein ECs4073 [Escherichia coli] gi|209913928|dbj|BAG79002.1| putative ABC transporter permease component [Escherichia coli SE11] gi|215266582|emb|CAS11021.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|217319911|gb|EEC28336.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. TW14588] gi|218353631|emb|CAU99839.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli 55989] gi|218362532|emb|CAR00156.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli IAI1] gi|218367033|emb|CAR04804.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli S88] gi|218371949|emb|CAR19805.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli IAI39] gi|218429048|emb|CAR09855.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli ED1a] gi|218433911|emb|CAR14828.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli UMN026] gi|222034911|emb|CAP77654.1| UPF0393 inner membrane protein yrbE [Escherichia coli LF82] gi|226839983|gb|EEH72004.1| toluene ABC transporter membrane protein [Escherichia sp. 1_1_43] gi|226899094|gb|EEH85353.1| integral membrane protein [Escherichia sp. 3_2_53FAA] gi|227835311|gb|EEJ45777.1| ABC superfamily ATP binding cassette transporter, membrane protein [Escherichia coli 83972] gi|238863136|gb|ACR65134.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli BW2952] gi|242378737|emb|CAQ33527.1| MlaE, subunit of phospholipid ABC transporter [Escherichia coli BL21(DE3)] gi|253323016|gb|ACT27618.1| protein of unknown function DUF140 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975037|gb|ACT40708.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli B str. REL606] gi|253979193|gb|ACT44863.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli BL21(DE3)] gi|254594543|gb|ACT73904.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|257755970|dbj|BAI27472.1| predicted toluene transporter subunit [Escherichia coli O26:H11 str. 11368] gi|257761154|dbj|BAI32651.1| predicted toluene transporter subunit [Escherichia coli O103:H2 str. 12009] gi|257766301|dbj|BAI37796.1| predicted toluene transporter subunit [Escherichia coli O111:H- str. 11128] gi|260447779|gb|ACX38201.1| protein of unknown function DUF140 [Escherichia coli DH1] gi|281180236|dbj|BAI56566.1| putative ABC transporter permease component [Escherichia coli SE15] gi|281602577|gb|ADA75561.1| inner membrane protein yrbE [Shigella flexneri 2002017] gi|284923216|emb|CBG36310.1| putative organic solvent tolerance protein [Escherichia coli 042] gi|290764441|gb|ADD58402.1| UPF0393 inner membrane protein yrbE [Escherichia coli O55:H7 str. CB9615] gi|291322617|gb|EFE62046.1| UPF0393 inner membrane protein yrbE [Escherichia coli B088] gi|291426809|gb|EFE99841.1| ABC transporter [Escherichia coli FVEC1412] gi|291431979|gb|EFF04962.1| inner membrane protein yrbE [Escherichia coli B185] gi|291469336|gb|EFF11827.1| conserved hypothetical protein [Escherichia coli B354] gi|294493221|gb|ADE91977.1| putative ABC transporter, permease protein [Escherichia coli IHE3034] gi|298277684|gb|EFI19200.1| ABC transport system permease [Escherichia coli FVEC1302] gi|299879926|gb|EFI88137.1| toluene tolerance protein Ttg2B [Escherichia coli MS 196-1] gi|300300191|gb|EFJ56576.1| toluene tolerance protein Ttg2B [Escherichia coli MS 185-1] gi|300307892|gb|EFJ62412.1| toluene tolerance protein Ttg2B [Escherichia coli MS 200-1] gi|300317329|gb|EFJ67113.1| toluene tolerance protein Ttg2B [Escherichia coli MS 175-1] gi|300358310|gb|EFJ74180.1| toluene tolerance protein Ttg2B [Escherichia coli MS 198-1] gi|300397692|gb|EFJ81230.1| toluene tolerance protein Ttg2B [Escherichia coli MS 69-1] gi|300403660|gb|EFJ87198.1| toluene tolerance protein Ttg2B [Escherichia coli MS 84-1] gi|300407000|gb|EFJ90538.1| toluene tolerance protein Ttg2B [Escherichia coli MS 45-1] gi|300413898|gb|EFJ97208.1| toluene tolerance protein Ttg2B [Escherichia coli MS 115-1] gi|300417919|gb|EFK01230.1| toluene tolerance protein Ttg2B [Escherichia coli MS 182-1] gi|300451654|gb|EFK15274.1| toluene tolerance protein Ttg2B [Escherichia coli MS 116-1] gi|300456873|gb|EFK20366.1| toluene tolerance protein Ttg2B [Escherichia coli MS 21-1] gi|300462176|gb|EFK25669.1| toluene tolerance protein Ttg2B [Escherichia coli MS 187-1] gi|300523608|gb|EFK44677.1| toluene tolerance protein Ttg2B [Escherichia coli MS 119-7] gi|300529849|gb|EFK50911.1| toluene tolerance protein Ttg2B [Escherichia coli MS 107-1] gi|300838019|gb|EFK65779.1| toluene tolerance protein Ttg2B [Escherichia coli MS 124-1] gi|300846937|gb|EFK74697.1| toluene tolerance protein Ttg2B [Escherichia coli MS 78-1] gi|301076759|gb|EFK91565.1| toluene tolerance protein Ttg2B [Escherichia coli MS 146-1] gi|305850029|gb|EFM50488.1| toluene ABC transporter, permease protein [Escherichia coli NC101] gi|306907012|gb|EFN37520.1| protein of unknown function DUF140 [Escherichia coli W] gi|307555287|gb|ADN48062.1| toluene ABC transporter [Escherichia coli ABU 83972] gi|307625207|gb|ADN69511.1| toluene ABC transporter, permease protein [Escherichia coli UM146] gi|308122730|gb|EFO59992.1| toluene tolerance protein Ttg2B [Escherichia coli MS 145-7] gi|309703620|emb|CBJ02960.1| putative organic solvent tolerance protein [Escherichia coli ETEC H10407] gi|310334909|gb|EFQ01114.1| toluene tolerance protein Ttg2B [Escherichia coli 1827-70] gi|312286685|gb|EFR14596.1| toluene tolerance protein Ttg2B [Escherichia coli 2362-75] gi|312947751|gb|ADR28578.1| putative toluene transporter subunit [Escherichia coli O83:H1 str. NRG 857C] gi|313648563|gb|EFS13005.1| toluene tolerance protein Ttg2B [Shigella flexneri 2a str. 2457T] gi|315062500|gb|ADT76827.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli W] gi|315137780|dbj|BAJ44939.1| hypothetical protein ECDH1ME8569_3083 [Escherichia coli DH1] gi|315257122|gb|EFU37090.1| toluene tolerance protein Ttg2B [Escherichia coli MS 85-1] gi|315289007|gb|EFU48405.1| toluene tolerance protein Ttg2B [Escherichia coli MS 110-3] gi|315294854|gb|EFU54193.1| toluene tolerance protein Ttg2B [Escherichia coli MS 153-1] gi|315297940|gb|EFU57210.1| toluene tolerance protein Ttg2B [Escherichia coli MS 16-3] gi|315617277|gb|EFU97886.1| toluene tolerance protein Ttg2B [Escherichia coli 3431] gi|320181469|gb|EFW56387.1| Uncharacterized ABC transporter, permease component YrbE [Shigella boydii ATCC 9905] gi|320186681|gb|EFW61405.1| Uncharacterized ABC transporter, permease component YrbE [Shigella flexneri CDC 796-83] gi|320189547|gb|EFW64206.1| Uncharacterized ABC transporter, permease component YrbE [Escherichia coli O157:H7 str. EC1212] gi|320194679|gb|EFW69309.1| Uncharacterized ABC transporter, permease component YrbE [Escherichia coli WV_060327] gi|320202108|gb|EFW76683.1| Uncharacterized ABC transporter, permease component YrbE [Escherichia coli EC4100B] gi|320645562|gb|EFX14571.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli O157:H- str. 493-89] gi|320650872|gb|EFX19329.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli O157:H- str. H 2687] gi|320656253|gb|EFX24165.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661943|gb|EFX29351.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli O55:H7 str. USDA 5905] gi|320666778|gb|EFX33757.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli O157:H7 str. LSU-61] gi|323154409|gb|EFZ40610.1| toluene tolerance protein Ttg2B [Escherichia coli EPECa14] gi|323162886|gb|EFZ48721.1| toluene tolerance protein Ttg2B [Escherichia coli E128010] gi|323165155|gb|EFZ50945.1| toluene tolerance protein Ttg2B [Shigella sonnei 53G] gi|323173546|gb|EFZ59175.1| toluene tolerance protein Ttg2B [Escherichia coli LT-68] gi|323178630|gb|EFZ64206.1| toluene tolerance protein Ttg2B [Escherichia coli 1180] gi|323183148|gb|EFZ68546.1| toluene tolerance protein Ttg2B [Escherichia coli 1357] gi|323189185|gb|EFZ74469.1| toluene tolerance protein Ttg2B [Escherichia coli RN587/1] gi|323376912|gb|ADX49180.1| protein of unknown function DUF140 [Escherichia coli KO11] gi|323936112|gb|EGB32406.1| inner membrane protein yrbE [Escherichia coli E1520] gi|323941706|gb|EGB37885.1| inner membrane protein yrbE [Escherichia coli E482] gi|323946952|gb|EGB42968.1| inner membrane protein yrbE [Escherichia coli H120] gi|323951287|gb|EGB47162.1| inner membrane protein yrbE [Escherichia coli H252] gi|323957659|gb|EGB53373.1| inner membrane protein yrbE [Escherichia coli H263] gi|323961151|gb|EGB56765.1| inner membrane protein yrbE [Escherichia coli H489] gi|323966374|gb|EGB61808.1| inner membrane protein yrbE [Escherichia coli M863] gi|323970243|gb|EGB65514.1| inner membrane protein yrbE [Escherichia coli TA007] gi|323979089|gb|EGB74167.1| inner membrane protein yrbE [Escherichia coli TW10509] gi|324008706|gb|EGB77925.1| toluene tolerance protein Ttg2B [Escherichia coli MS 57-2] gi|324012162|gb|EGB81381.1| toluene tolerance protein Ttg2B [Escherichia coli MS 60-1] gi|324018354|gb|EGB87573.1| toluene tolerance protein Ttg2B [Escherichia coli MS 117-3] gi|324119559|gb|EGC13441.1| inner membrane protein yrbE [Escherichia coli E1167] gi|326337894|gb|EGD61728.1| Uncharacterized ABC transporter, permease component YrbE [Escherichia coli O157:H7 str. 1125] gi|326347464|gb|EGD71189.1| Uncharacterized ABC transporter, permease component YrbE [Escherichia coli O157:H7 str. 1044] gi|327251285|gb|EGE62974.1| toluene tolerance protein Ttg2B [Escherichia coli STEC_7v] gi|330909246|gb|EGH37760.1| uncharacterized ABC transporter, permease component YrbE [Escherichia coli AA86] gi|331037363|gb|EGI09587.1| putative ABC superfamily (membrane) transport protein [Escherichia coli H736] gi|331042741|gb|EGI14883.1| putative ABC superfamily (membrane) transport protein [Escherichia coli M605] gi|331048180|gb|EGI20257.1| putative ABC superfamily (membrane) transport protein [Escherichia coli M718] gi|331054063|gb|EGI26092.1| putative ABC superfamily (membrane) transport protein [Escherichia coli TA206] gi|331058055|gb|EGI30037.1| putative ABC superfamily (membrane) transport protein [Escherichia coli TA143] gi|331062934|gb|EGI34848.1| putative ABC superfamily (membrane) transport protein [Escherichia coli TA271] gi|331068163|gb|EGI39559.1| putative ABC superfamily (membrane) transport protein [Escherichia coli TA280] gi|331073338|gb|EGI44661.1| putative ABC superfamily (membrane) transport protein [Escherichia coli H591] gi|331078456|gb|EGI49662.1| putative ABC superfamily (membrane) transport protein [Escherichia coli H299] gi|332086231|gb|EGI91389.1| toluene tolerance protein Ttg2B [Shigella boydii 5216-82] gi|332086452|gb|EGI91599.1| toluene tolerance protein Ttg2B [Shigella dysenteriae 155-74] gi|332090701|gb|EGI95795.1| toluene tolerance protein Ttg2B [Shigella boydii 3594-74] gi|332102327|gb|EGJ05673.1| membrane component of ABC superfamily [Shigella sp. D9] Length = 260 Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 71/218 (32%), Positives = 118/218 (54%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y VGV + ++++ G V+ QG L+ + AE L+++ LRE+G ++ Sbjct: 44 LVRQLYNVGVLSMLIIVVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ AGR+GSA+ AEIG M+ E++ ++ M +D +R +ISPR WA +ISLPLLT++ Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFV 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 I G S+ V WK D F F+S + ++ LIK+ A + +++ G Sbjct: 164 AVGIWGGSLVGVSWKGIDSGF--FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV S V+ +D + F Sbjct: 222 YDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|294634664|ref|ZP_06713197.1| toluene tolerance ABC efflux transporter, permease [Edwardsiella tarda ATCC 23685] gi|291091910|gb|EFE24471.1| toluene tolerance ABC efflux transporter, permease [Edwardsiella tarda ATCC 23685] Length = 260 Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 73/219 (33%), Positives = 118/219 (53%), Gaps = 7/219 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 L RQ+Y VGV + ++++ G V+ QG L+ + AE S+ +M L L RE+G + Sbjct: 44 LRRQLYSVGVQSLLIIMVSGLFIGMVLGLQGYLVLTTYSAEA-SLGMMVALSLLRELGPV 102 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +++PR WA +IS+PLLT++ Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLTVIF 162 Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331 I G S+ V WK D F F+S ++ LIK+ A + +A+ Sbjct: 163 VAIGIWGGSVVGVDWKGIDAGF--FWSAMQGAVDYRTDLLNCLIKSLVFAITVMWIALFN 220 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+ S + + T VV S V+ +D + F Sbjct: 221 GYDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|95928284|ref|ZP_01311032.1| protein of unknown function DUF140 [Desulfuromonas acetoxidans DSM 684] gi|95135555|gb|EAT17206.1| protein of unknown function DUF140 [Desulfuromonas acetoxidans DSM 684] Length = 261 Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 56/173 (32%), Positives = 105/173 (60%), Gaps = 4/173 (2%) Query: 145 SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204 YK K ++RQ++++G + + V++ TG V+ QG + L++FG+ F ++ Sbjct: 35 PPYKVK----PIVRQIHFIGANSLFVILFTGLFTGMVLGLQGYYTLAKFGSVGFLGGAVA 90 Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264 + +RE+G +L A+M+ GR+GSAI AE+G M+ +E+IDA+ M +D + LI P++ A + Sbjct: 91 LSLIRELGPVLAALMVIGRAGSAICAEVGIMRNSEQIDALECMAIDPISYLIVPKLVAGL 150 Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 I++PLLT + + I G ++ + +D+ +F +S+ +I GL+K+ Sbjct: 151 IAMPLLTAIFDVIGIFGGFMIGVQLFDVSAGSYFQGMYSSVVWLDIEMGLVKS 203 >gi|226939988|ref|YP_002795061.1| ABC transport system permease protein [Laribacter hongkongensis HLHK9] gi|226714914|gb|ACO74052.1| probable ABC transport system permease protein [Laribacter hongkongensis HLHK9] Length = 261 Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 64/214 (29%), Positives = 117/214 (54%), Gaps = 1/214 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 IR++Y+ GV + ++++ G V+ QG L +FG+ L+++ LRE+G +L Sbjct: 48 IREIYFAGVLSLIIIVVSGTFVGMVLGLQGYTTLMRFGSADALGGLVALSLLRELGPVLA 107 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ A RSGSA+ AEIG MK E++DA+ M ++ V +++PR WA ++S+PLL L + Sbjct: 108 AILFASRSGSAMTAEIGLMKATEQLDAMAVMAVNPVARVVAPRFWAGVLSMPLLAALFSV 167 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I G V + ++S+ + +L ++ G+IK+ A+ ++A+ EG+ Sbjct: 168 MGIFGGYFVGVVMIGLDHGAYWSQMQAAVSLHEDVINGIIKSGVFGVAVTLIAVFEGYDA 227 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + + T VV S +++ +D + F F Sbjct: 228 QPTAAGVSAATTRTVVTSALVILALDFVLTAFMF 261 >gi|325105498|ref|YP_004275152.1| protein of unknown function DUF140 [Pedobacter saltans DSM 12145] gi|324974346|gb|ADY53330.1| protein of unknown function DUF140 [Pedobacter saltans DSM 12145] Length = 260 Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 72/259 (27%), Positives = 124/259 (47%), Gaps = 25/259 (9%) Query: 96 QKPQRSFFYNSFKNLHYH---IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGF 152 +KPQ S F N+ Y + K IV+F E ++ ++K Sbjct: 2 EKPQ-SGFRKKLNNIFYELYLVHKFIVRFFK-----------------ELFSAPVEWK-- 41 Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 +++Q Y +G + ++ L F+TG V +Q L++FGA + L++I +R + Sbjct: 42 --EIMKQCYLLGFKSLSLITLTGFITGIVFTKQSRPSLAEFGATSWLPSLVAIAIIRSLA 99 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 LLTA++ AG+ GS I AE+GSMK+ E+IDA+ G + + L+ R A I++P+LT Sbjct: 100 PLLTALITAGKVGSNIGAELGSMKVTEQIDAMEVSGTNPFKFLVVTRTLATTITIPILTF 159 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 ++GA + + + + + F + + +IF IKA IGIV +G Sbjct: 160 YTGLVGLLGAFLNVTTFENTSYQAFMQSAFESISFLDIFASTIKAIVFGFTIGIVGCYQG 219 Query: 333 FAVGVHSNSLGKKVTTCVV 351 + + +G+ VV Sbjct: 220 YNSSKGTEGVGRAANASVV 238 >gi|290476800|ref|YP_003469711.1| putative ABC transporter membrane protein [Xenorhabdus bovienii SS-2004] gi|289176144|emb|CBJ82949.1| putative transport protein (ABC superfamily, membrane) [Xenorhabdus bovienii SS-2004] Length = 262 Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 73/218 (33%), Positives = 119/218 (54%), Gaps = 7/218 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 L +Q+Y VGV + ++++ G V++ QG L+ F AE S+ +M L L RE+G + Sbjct: 46 LCQQLYSVGVQSLLIIVVSGLFIGMVLSLQGYLVLTTFSAE-GSLGMMVALSLLRELGPV 104 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGR+GSA+ AEIG MK E+I ++ M +D +R +I+PR WA IS+PLL+++ Sbjct: 105 VTALLFAGRAGSALTAEIGLMKATEQISSLEMMAIDPLRRVIAPRFWAGFISMPLLSLIF 164 Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331 IIG +I V WK D F F+S S ++ +K+ A + +A+ Sbjct: 165 VAVGIIGGAIVGVDWKGIDAGF--FWSSMQSAVDWQKDLLNCFLKSVAFAITVTWIALFN 222 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 G+ S + + T VV + V+ +D + F Sbjct: 223 GYDAIPTSEGISRATTRTVVHASLAVLGLDFVLTALMF 260 >gi|319954485|ref|YP_004165752.1| hypothetical protein Celal_2978 [Cellulophaga algicola DSM 14237] gi|319423145|gb|ADV50254.1| protein of unknown function DUF140 [Cellulophaga algicola DSM 14237] Length = 258 Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 65/221 (29%), Positives = 121/221 (54%), Gaps = 4/221 (1%) Query: 141 EFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSI 200 E ++F FL RQ Y +G + +V++ F+ G V+ Q + QFGA + Sbjct: 29 EALRPPFEFNEFL----RQCYQIGNRSLTLVLVTGFIIGLVLDLQSRPTMIQFGAISWMP 84 Query: 201 DLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRI 260 +++ I +RE+G ++TA++ AGR S I AE+GSM++ E+IDA+ G + + L+ R+ Sbjct: 85 NMVGISIVRELGPVITALVCAGRISSGIGAELGSMRVTEQIDAMEVSGTNPFKYLVVTRV 144 Query: 261 WALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320 A I+ LPLL IL++ ++ G++++ ++ F ++F+ + ++ +IK F Sbjct: 145 MASILMLPLLVILSDAVSLFGSALIENIKGNVSFQLYFNTIFDALSYTDLIPAIIKTFFF 204 Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 AIG+V +G+ + +G T VV + ++ +ID Sbjct: 205 GFAIGLVGCFKGYYCKKGTAGVGIAANTAVVMTSLLLFVID 245 >gi|312888834|ref|ZP_07748397.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM 18603] gi|311298709|gb|EFQ75815.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM 18603] Length = 267 Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 64/213 (30%), Positives = 112/213 (52%), Gaps = 4/213 (1%) Query: 147 YKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206 Y+FK +++Q Y VGV + ++ + F+ G + +Q LS+FGA + L+SI Sbjct: 46 YEFK----EILKQCYDVGVKSLLLISVTGFIVGVIFTKQSRPSLSEFGATSWLPSLVSIA 101 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 LR + L+TA++ AG+ GS+I AE+GSM++ E+IDA+ G + L+ R+ A I+ Sbjct: 102 ILRALASLVTALIAAGKVGSSIGAELGSMRVTEQIDAMEVSGTKPFKYLVCTRVLATTIT 161 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326 +PLL F A++G + + + + F + T + ++ L K+ IGI Sbjct: 162 IPLLASYTAFIALLGGYLNVSQNEGTSYTTFMEQVFEPLTFIDFWSTLAKSIMFGFTIGI 221 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 V +G+ + +GK VV ++ +V I Sbjct: 222 VGCYQGYNSSRGTEGVGKAANAAVVTAMFLVFI 254 >gi|295691537|ref|YP_003595230.1| hypothetical protein Cseg_4204 [Caulobacter segnis ATCC 21756] gi|295433440|gb|ADG12612.1| protein of unknown function DUF140 [Caulobacter segnis ATCC 21756] Length = 269 Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 68/213 (31%), Positives = 110/213 (51%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ +G +PVV L + TGA +A +F AE ++++ RE+G +L Sbjct: 53 LLRQFMAIGFFSLPVVGLTAVFTGAALALNIFTGGGRFNAEQVMPQIVALGITRELGPVL 112 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A+M+AGR +AI AEIG+M+ E+IDA+RT+ D R L+ PR+ A ++ LPLLT +A+ Sbjct: 113 AALMLAGRVSAAIAAEIGAMRATEQIDAMRTLSTDPFRYLVGPRLLAGVLMLPLLTAVAD 172 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 + G +V + D V+ +I +GLIKA + ++ G+ Sbjct: 173 TIGVAGGWLVATRVLDFSPTVYIRNTIDFLESWDIVSGLIKAAVFGFIVALMGCYHGYNA 232 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + +G+ T VV S ++ D L F+ Sbjct: 233 SGGARGVGRATTHAVVSSAILIFASDYLLTTFF 265 >gi|108762257|ref|YP_631903.1| putative ABC transporter permease [Myxococcus xanthus DK 1622] gi|108466137|gb|ABF91322.1| putative ABC transporter, permease protein [Myxococcus xanthus DK 1622] Length = 271 Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 64/217 (29%), Positives = 113/217 (52%) Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 L++L Q+ +VGV + +V L TG V A Q + F AE +++ RE+ Sbjct: 55 LVNLFAQLDFVGVGSIFIVSLTGTFTGMVFALQTSTAFQLFDAESLVGPTVALTLTRELA 114 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 + +A+M+ R+GSA+ E+G+M++ E++DA+ TM ++ V+ L+ PR+ A + +P LT+ Sbjct: 115 AVFSALMVTMRAGSAMCTELGTMRVTEQVDALETMAVNPVQYLLVPRVLAGLFMVPALTM 174 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 L N + GA +V I F SR +IF GL+K ++ ++ +G Sbjct: 175 LFNTMGMGGAYVVAVGGLGISPGTFLSRTQQWLAPEDIFQGLLKGAVFGLSVSLICCFKG 234 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 F + +G+ T +V S + I+D + I +F Sbjct: 235 FNASGGAKGVGQATTEAMVASALSIFILDFILGILFF 271 >gi|322834661|ref|YP_004214688.1| hypothetical protein Rahaq_3972 [Rahnella sp. Y9602] gi|321169862|gb|ADW75561.1| protein of unknown function DUF140 [Rahnella sp. Y9602] Length = 260 Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 72/219 (32%), Positives = 119/219 (54%), Gaps = 7/219 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 LI+Q+Y VGV + ++++ G V+ QG L+ + AE S+ +M L L RE+G + Sbjct: 44 LIKQLYSVGVLSLLIILVSGLFIGMVLGLQGYLILTTYSAEA-SLGMMVALSLLRELGPV 102 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGR+GSA+ AE+G MK E+I ++ M +D +R +++PR WA +IS+PLLT + Sbjct: 103 VTALLFAGRAGSALTAELGLMKATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIF 162 Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331 + G S+ V WK D F F+S + ++ LIK+ A + +A+ Sbjct: 163 VAVGVWGGSLVGVDWKGIDSGF--FWSAMQTAVDWRTDLLNCLIKSLVFAITVTWIALFN 220 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+ S + + T VV S V+ +D + F Sbjct: 221 GYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|303256524|ref|ZP_07342538.1| toluene tolerance ABC transporter, permease protein [Burkholderiales bacterium 1_1_47] gi|331000622|ref|ZP_08324280.1| toluene tolerance protein Ttg2B [Parasutterella excrementihominis YIT 11859] gi|302860015|gb|EFL83092.1| toluene tolerance ABC transporter, permease protein [Burkholderiales bacterium 1_1_47] gi|329571184|gb|EGG52889.1| toluene tolerance protein Ttg2B [Parasutterella excrementihominis YIT 11859] Length = 263 Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 66/217 (30%), Positives = 121/217 (55%), Gaps = 1/217 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 ++Q+Y+VG + ++++ G V+ QG + LS +G+E L+++ LRE+G ++T Sbjct: 47 LKQLYFVGNYSLVIILVSGLFVGFVLGLQGDYVLSSYGSEQALGVLVALSLLRELGPVVT 106 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+G+++ AEIG M E++ A+ MG+D +R ++ PR A +IS+PLL I+ + Sbjct: 107 ALLFAGRAGTSLTAEIGLMNAGEQLSALEMMGVDPIRRILGPRFLACVISMPLLAIMFSA 166 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAV 335 IIG+ +V + F+++ + + +I G+IK A+G +A+ EG+ Sbjct: 167 VGIIGSWVVAVPLIGLDSGAFWAQMQAGVEVGPDIGNGIIKTFVFGVAVGAIALYEGYTA 226 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 + T VV S +V+ +D + F F G Sbjct: 227 RATPEGVSSATTRTVVVSSLVVLGLDFILTAFMFTHG 263 >gi|238019665|ref|ZP_04600091.1| hypothetical protein VEIDISOL_01539 [Veillonella dispar ATCC 17748] gi|237863706|gb|EEP64996.1| hypothetical protein VEIDISOL_01539 [Veillonella dispar ATCC 17748] Length = 242 Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 112/212 (52%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +QM ++GV +P++ L GAV+ Q L +GA+ LM++ RE+G +L Sbjct: 31 QQMAHLGVDSLPIISLTLLFAGAVMTLQITDVLITYGAQSTVGGLMAVAMGRELGPILVG 90 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 V++AGR G+AI AEIG+MK+ E+IDA+R M +D + L+ PR+ A +I +P+L Sbjct: 91 VVLAGRVGAAITAEIGTMKVTEQIDALRVMAVDPIGYLVVPRVVACMIMVPILAFYGVVI 150 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 I G V + + + +T+++ GL+K+ I +V +G + Sbjct: 151 GIAGGYFVATAIKGLAPSTYLDSIQMFSTISDFTLGLVKSSVFGAVIALVGSYKGMETKM 210 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + ++G T+ VV SI +V +++ + + Sbjct: 211 GAEAVGFSTTSSVVTSIILVFVLNYFLSTLLY 242 >gi|254423355|ref|ZP_05037073.1| conserved hypothetical protein [Synechococcus sp. PCC 7335] gi|196190844|gb|EDX85808.1| conserved hypothetical protein [Synechococcus sp. PCC 7335] Length = 264 Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 65/198 (32%), Positives = 106/198 (53%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I QM VG + + ++ S G V Q + FGA +++I RE+ +LT Sbjct: 42 IEQMSAVGPESLLIALVTSVFVGMVFTIQVTREFITFGATTAIGGVLAITLSRELAPVLT 101 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV++AGR GSA AEIG+M++ E+IDA++ + D V L+ PR+ A + +P+L +LA Sbjct: 102 AVVLAGRVGSAFAAEIGTMRVTEQIDALQMLRSDPVDYLVIPRVIACALMVPMLNVLAII 161 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + ++G +V Y IPFAVF + + T+ ++ LIK+ I ++ G Sbjct: 162 TGLLGGLVVATTLYAIPFAVFLNSARNFLTIWDLAASLIKSLIFGVLIAVIGSSWGLTTT 221 Query: 337 VHSNSLGKKVTTCVVQSI 354 + +G+ TT VV S+ Sbjct: 222 GGAKGVGQSTTTAVVTSL 239 >gi|284008692|emb|CBA75353.1| conserved hypothetical protein [Arsenophonus nasoniae] Length = 261 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 74/219 (33%), Positives = 118/219 (53%), Gaps = 7/219 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 LI+Q+Y VG+ + ++ + G V+ QG L+ F AE S+ +M L L RE+G + Sbjct: 45 LIKQLYNVGILSLLIIAVSGLFIGMVLGLQGYLVLTMFSAES-SLGMMVALSLLRELGPV 103 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGR+GSA+ AEIG MK E+I ++ M +D +R +I+PR WA +IS+PLL ++ Sbjct: 104 VTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLRRVIAPRFWAGLISMPLLALIF 163 Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331 I+G ++ V WK D F F+S S +I IK+ A + +A+ Sbjct: 164 VAVGILGGALVGVDWKGIDEGF--FWSSMQSAIEWKKDILNCFIKSVVFAFTVSWIALFN 221 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+ S + + T VV S V+ +D + F Sbjct: 222 GYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 260 >gi|169794572|ref|YP_001712365.1| toluene tolerance efflux ABC transporter membrane protein [Acinetobacter baumannii AYE] gi|213158857|ref|YP_002320855.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB0057] gi|215482161|ref|YP_002324343.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB307-0294] gi|260557005|ref|ZP_05829222.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii ATCC 19606] gi|294839769|ref|ZP_06784452.1| toluene tolerance protein Ttg2B [Acinetobacter sp. 6013113] gi|294860447|ref|ZP_06798216.1| toluene tolerance protein Ttg2B [Acinetobacter sp. 6013150] gi|301347321|ref|ZP_07228062.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB056] gi|301510049|ref|ZP_07235286.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB058] gi|301597237|ref|ZP_07242245.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB059] gi|169147499|emb|CAM85360.1| toluene tolerance efflux transporter (ABC superfamily, membrane) [Acinetobacter baumannii AYE] gi|213058017|gb|ACJ42919.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB0057] gi|213988817|gb|ACJ59116.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB307-0294] gi|260409611|gb|EEX02912.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii ATCC 19606] Length = 259 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 78/250 (31%), Positives = 132/250 (52%), Gaps = 10/250 (4%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 +G+ +++ I + AH+L +I S+ KG + QM+ VGV + ++ + Sbjct: 7 LGRLVIERIRGIGAAAHMLLQIIF--------SFPTKGGFGRFVYQMHRVGVMSLLIIAV 58 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 GAV+ Q L FGAE +S+ LRE+ ++ A++ AGR+GSA+ AEIG Sbjct: 59 SGLFIGAVLGLQMYSILVTFGAESMLGTAISLTLLRELASVVAALLFAGRAGSALTAEIG 118 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 SMK +E++ ++ +G+D ++ ++SPR+WA I+SLP+LT++ IIG +V + Sbjct: 119 SMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIIGGKMVGVDFLGAD 178 Query: 294 FAVFFSRFHSTATLA-NIFTG-LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 F+S +T +IF G +IK+ A VA+ +G+A + +T VV Sbjct: 179 EGSFWSGMQNTVRFGHDIFNGTIIKSIVFALICTWVAVYQGYACDPTPEGIATAMTRTVV 238 Query: 352 QSISIVIIID 361 S V+ D Sbjct: 239 YSSLCVLGFD 248 >gi|188997595|ref|YP_001931846.1| protein of unknown function DUF140 [Sulfurihydrogenibium sp. YO3AOP1] gi|188932662|gb|ACD67292.1| protein of unknown function DUF140 [Sulfurihydrogenibium sp. YO3AOP1] Length = 247 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 70/233 (30%), Positives = 122/233 (52%), Gaps = 6/233 (2%) Query: 135 VISNTGE----FCASSYKFKGF--LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +I +TG F + FK F + +++ M +GV+ P+++L F TG V+ + Sbjct: 7 LIEHTGNITIFFLRTLLSFKKFPKIKHILKYMEDIGVNAAPLIVLTGFFTGGVLVVETYP 66 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 +F AE L+S+ RE+ +L A+++ RSGSAI A IG+M+I E+IDA+ M Sbjct: 67 TFHKFNAEFLMGALVSLSLARELSPVLVALLVTARSGSAIAANIGTMRITEQIDALEVMA 126 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 +D +R L++PRI I+ +P LT+L+ S +IG Y I +++ + L Sbjct: 127 VDPMRYLVAPRIITAILMVPFLTVLSYTSGVIGGYFTSVYVYGINEYMYWEKLKDFTELK 186 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 +I GL K+ + + G+ + +G+ TT VV + +++I+D Sbjct: 187 DIMGGLYKSAVFGVILVTITAYFGYITKGGAEGVGRSTTTAVVVASVVILILD 239 >gi|167626717|ref|YP_001677217.1| ABC-type transport system permease [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|241667292|ref|ZP_04754870.1| ABC-type transport system permease protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254875843|ref|ZP_05248553.1| ABC transporter, permease protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|167596718|gb|ABZ86716.1| ABC-type transport system permease protein [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|254841864|gb|EET20278.1| ABC transporter, permease protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 254 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 60/195 (30%), Positives = 113/195 (57%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I Q+ VGV+ + +++ G V++ QG + LS+FGA ++++ LRE+G ++T Sbjct: 39 ITQIKAVGVNSIIIIVTSGIFIGLVLSLQGYYTLSKFGAHSLLGVMVALSVLRELGPVVT 98 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+ S+I +EIG MK ++I++++ M ++ + ++S R WA +IS P+L ++ Sbjct: 99 AMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFILSTRFWACVISGPILALIFAT 158 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 AI+ ++ I + F+S S+ T+++I G+IK+ A +A+ +G+ Sbjct: 159 VAILAGFVLAEAGLGISYGEFWSNIQSSVTISDITNGIIKSLVFAFITAWIALYQGYYCI 218 Query: 337 VHSNSLGKKVTTCVV 351 SN + K T VV Sbjct: 219 ADSNGIAKATTKTVV 233 >gi|262042753|ref|ZP_06015907.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259039978|gb|EEW41095.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 260 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 71/218 (32%), Positives = 118/218 (54%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y VGV + ++I+ G V+ QG L+ + AE L+++ LRE+G ++ Sbjct: 44 LVRQLYNVGVLSMLIIIVSGLFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGSVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ AGR+GSA+ AEIG M+ E++ ++ M +D +R +ISPR WA +ISLPLLTI+ Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFV 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 I G ++ V WK D F F++ + ++ LIK+ A + +A+ G Sbjct: 164 AVGIWGGALVGVSWKGIDGGF--FWTAMQNAVDWRMDLVNCLIKSLVFAITVTWIALFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV + V+ +D + F Sbjct: 222 YDAVPTSAGISRATTRTVVHASLAVLGLDFVLTALMFG 259 >gi|293394224|ref|ZP_06638524.1| toluene tolerance ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] gi|291423202|gb|EFE96431.1| toluene tolerance ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] Length = 260 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 73/219 (33%), Positives = 118/219 (53%), Gaps = 7/219 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 L++Q++ VGV + ++++ G V+ QG L+ + AE S+ +M L L RE+G + Sbjct: 44 LVKQLHSVGVQSLLIIMVSGLFIGMVLGLQGYLVLTTYSAEA-SLGMMVALSLLRELGPV 102 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGR+GSA+ AEIG MK E+I ++ M +D +R + +PR WA +IS+PLLTI+ Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLRRIAAPRFWAGLISMPLLTIIF 162 Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331 I G S+ V WK D F F+S ++ LIK+ A + +A+ Sbjct: 163 VAVGIWGGSVVGVDWKGIDSGF--FWSAMQGAVEWRQDLLNCLIKSVVFAITVTWIAIFN 220 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+ S + + T VV S V+ +D + F Sbjct: 221 GYDAVPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|242241047|ref|YP_002989228.1| hypothetical protein Dd703_3649 [Dickeya dadantii Ech703] gi|242133104|gb|ACS87406.1| protein of unknown function DUF140 [Dickeya dadantii Ech703] Length = 260 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 72/219 (32%), Positives = 118/219 (53%), Gaps = 7/219 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 L RQ+Y VGV + ++I+ G V+ QG L+ + AE S+ +M L L RE+G + Sbjct: 44 LARQLYSVGVQSLLIIIVSGCFIGMVLGLQGYIVLTTYSAEA-SLGMMVALSLLRELGPV 102 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +++PR WA IS+PLLT++ Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVVAPRFWAGFISMPLLTLIF 162 Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKE 331 I G ++ V WK D F F+S ++ ++K+ F A + +A+ Sbjct: 163 VAVGIWGGALVGVDWKGIDSGF--FWSAMQGAVEWRHDVMNCVLKSLFFAMTVTWIALFN 220 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+ S + + T VV S V+ +D + F Sbjct: 221 GYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|77918062|ref|YP_355877.1| toluene export protein [Pelobacter carbinolicus DSM 2380] gi|77544145|gb|ABA87707.1| ABC-type toluene export protein [Pelobacter carbinolicus DSM 2380] Length = 269 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 64/225 (28%), Positives = 123/225 (54%), Gaps = 10/225 (4%) Query: 147 YKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206 YKF ++RQ++++G V++ TG V+A QG + L +FG+E +++ Sbjct: 45 YKFG----PILRQIHFIGSRSSFVILFTGSFTGMVLALQGYYTLRKFGSEGLLGAAVALS 100 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 +RE+G ++ A+M+ GR+GSAI AE+G M+ +E+IDA+ M +D + L++P+ A I+S Sbjct: 101 LIRELGPVIAALMVVGRAGSAICAEVGIMRNSEQIDALECMAIDPYKYLMAPKFVAGILS 160 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326 +PLLT + + + I+G +V + +F + +S+ ++ GL+K+ I Sbjct: 161 MPLLTAIFDMAGIVGGYLVGVAMLGVNKGAYFQQMYSSVVWNDVEMGLVKSLIFGLLIIW 220 Query: 327 VAMKEGFAV------GVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + +G+ + G + + + T VV S +++ D L + Sbjct: 221 IGAAKGYYLHLERSGGFGAEGVSRVTTDAVVLSSVAILVWDYLLS 265 >gi|317046704|ref|YP_004114352.1| hypothetical protein Pat9b_0470 [Pantoea sp. At-9b] gi|316948321|gb|ADU67796.1| protein of unknown function DUF140 [Pantoea sp. At-9b] Length = 260 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/217 (31%), Positives = 117/217 (53%), Gaps = 5/217 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y VGV + ++++ G V+ QG L+ + AE L+++ LRE+G ++ Sbjct: 44 LVKQLYSVGVMSLLIIMVSGLFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R ++SPR WA IS+PLL ++ Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVVSPRFWAGFISMPLLALIFT 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 I G ++ V WK D F F+S + +I +IK+ A + +A+ G Sbjct: 164 AVGIAGGALVGVSWKGIDPGF--FWSAMQNAVDFRTDIINCIIKSAVFAITVTWIALFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + S + + T VV + V+ +D + F Sbjct: 222 YDAIPTSEGISRATTRTVVHASLAVLGLDFVLTALMF 258 >gi|116328041|ref|YP_797761.1| membrane protein of an ABC transporter complex [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116120785|gb|ABJ78828.1| Membrane protein of an ABC transporter complex [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 259 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 67/208 (32%), Positives = 108/208 (51%), Gaps = 4/208 (1%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 ++ QMY GV + VV +++ TG +++ L FGAE LM+I RE+ Sbjct: 39 EILDQMYITGVGSIFVVSIVAIFTGMIMSLNTGLGLKDFGAEGQIGLLMTITLTREMSPF 98 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA+++A GSA+ AEIG+MKI+EEIDA+ M +D VR LI PRI I +P+L + + Sbjct: 99 MTALILAASIGSAMAAEIGTMKISEEIDALEVMSIDPVRYLIFPRILGFSIMVPVLCVYS 158 Query: 275 NFSAIIGASIVIWKYYDIPFAVF----FSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330 I+G +IV + I + + F R S L +++ G++K + ++ Sbjct: 159 TILGILGGAIVGYFQLGIDYFTYFRDVFDRVASIPGLKDLYVGILKGFIFGVIVSAISCS 218 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVI 358 G + +G+ VV S +VI Sbjct: 219 HGLRTSGGAIGVGRATRESVVTSFLMVI 246 >gi|50086238|ref|YP_047748.1| toluene tolerance efflux ABC transporter membrane protein [Acinetobacter sp. ADP1] gi|49532214|emb|CAG69926.1| toluene tolerance efflux transporter (ABC superfamily, membrane) [Acinetobacter sp. ADP1] Length = 258 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 64/198 (32%), Positives = 110/198 (55%), Gaps = 1/198 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I QMY VGV + ++ + G VI QG L G+E ++S+ LRE+ ++ Sbjct: 42 IYQMYRVGVMSLLIITVSGLFIGLVIGLQGYSILVNVGSEAMLGTMVSLTLLRELAPVVA 101 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+GSA+ AEIGSMK +E++ ++ +G+D ++ ++SPR+WA I+SLP+LT++ Sbjct: 102 ALLFAGRAGSALTAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAA 161 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAV 335 I+G +V + + F+S S ++ G+IK+ A +A+ +G+A Sbjct: 162 IGILGGKMVGVDFLGVDEGSFWSGMQSNVQFGHDVVNGIIKSIVFALVCTWIAVYQGYAC 221 Query: 336 GVHSNSLGKKVTTCVVQS 353 + +T VV S Sbjct: 222 DPTPEGIATSMTRTVVYS 239 >gi|262373545|ref|ZP_06066823.1| toluene tolerance efflux transporter [Acinetobacter junii SH205] gi|262311298|gb|EEY92384.1| toluene tolerance efflux transporter [Acinetobacter junii SH205] Length = 258 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 66/209 (31%), Positives = 113/209 (54%), Gaps = 1/209 (0%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 S KG I QMY VGV + ++ + G V+ QG L G+E ++S+ Sbjct: 31 SMPSKGGFQRFIYQMYRVGVMSLLIISVSGLFIGLVLGLQGYSILVNVGSEAMLGTMVSL 90 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 LRE+ ++ A++ AGR+GSA+ AEIGSMK +E++ ++ +G+D ++ ++SPR+WA I+ Sbjct: 91 TLLRELAPVVAALLFAGRAGSALTAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIV 150 Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAI 324 SLP+LT++ I+G +V + + F+ S+ ++ G+IK+ A Sbjct: 151 SLPMLTVIFAAIGIVGGKLVGVDFLGVDEGSFWGGMQSSVQFGHDVVNGIIKSVVFALIC 210 Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 VA+ +G+A + +T VV S Sbjct: 211 TWVAVYQGYACDPTPEGIATSMTRTVVYS 239 >gi|183597953|ref|ZP_02959446.1| hypothetical protein PROSTU_01302 [Providencia stuartii ATCC 25827] gi|188022725|gb|EDU60765.1| hypothetical protein PROSTU_01302 [Providencia stuartii ATCC 25827] Length = 260 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 74/219 (33%), Positives = 119/219 (54%), Gaps = 7/219 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 LI+Q+Y VGV + +V + G V+ QG L+ F AE S+ +M L L RE+G + Sbjct: 44 LIKQLYAVGVQSLLIVAVSGLFIGMVLGLQGYLVLTTFSAEA-SLGMMVALSLLRELGPV 102 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGR+GSA+ AEIG MK E+I ++ M +D +R +I+PR WA IS+PLL+++ Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLRRVIAPRFWAGFISMPLLSLIF 162 Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331 I+G ++ V WK D F F++ S+ +I IK+ A + +A+ Sbjct: 163 VAVGILGGALVGVDWKGIDEGF--FWASMQSSVDWRMDIVNCFIKSLVFAITVTWIALFN 220 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+ S + + T VV + V+ +D + F Sbjct: 221 GYDAIPTSEGISQATTRTVVHASLAVLGLDFVLTALMFG 259 >gi|323143323|ref|ZP_08078012.1| toluene tolerance protein Ttg2B [Succinatimonas hippei YIT 12066] gi|322416895|gb|EFY07540.1| toluene tolerance protein Ttg2B [Succinatimonas hippei YIT 12066] Length = 257 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 70/223 (31%), Positives = 119/223 (53%), Gaps = 1/223 (0%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 FK LI Q+Y+VGV V ++++ G V+ QG L F A L+++ Sbjct: 35 DFKKHFPLLISQIYFVGVQSVIIILVSGLFIGMVLGLQGFNILKDFMATGSLGTLVALAI 94 Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267 +RE+G ++TA++ AGR+GSA+ AEIG +K +E++ ++ M +D +R +ISPR WA IS+ Sbjct: 95 IRELGPVVTALLYAGRAGSALTAEIGQLKASEQLSSMEMMAVDPLRRIISPRFWAGAISM 154 Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGI 326 PLL+I+ I G +V + + +++S S+ L +I ++K+ A Sbjct: 155 PLLSIMFCLVGIYGGKLVGVDWLGLDDGIYWSGMQSSVDLVEDIGCMVVKSIVFAIVCTW 214 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 +A+ G+ S+ + T VVQS V+ +D + F Sbjct: 215 IALFNGYDCTPTSSGISNATTATVVQSSLAVLGLDFVLTALMF 257 >gi|92114341|ref|YP_574269.1| hypothetical protein Csal_2219 [Chromohalobacter salexigens DSM 3043] gi|91797431|gb|ABE59570.1| protein of unknown function DUF140 [Chromohalobacter salexigens DSM 3043] Length = 260 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 63/215 (29%), Positives = 121/215 (56%), Gaps = 1/215 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 +RQM+++GV + +V++ G V+ QG L FGAE ++++ LRE+ ++ Sbjct: 43 LRQMHFIGVMSLAIVLVSGLFIGMVLGLQGFTILVDFGAEDALGQMVALSLLRELAPVVA 102 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+GSA+ AEIG MK E++ ++ +G+D +R +++PR+WA +S+PLLT+ + Sbjct: 103 ALLFAGRAGSALTAEIGLMKATEQLTSMEMIGVDPLRRIVAPRLWAGFVSMPLLTVGFSV 162 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHST-ATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I G +V ++ + ++S S+ A + +I G++K+ + +A+ +G+ + Sbjct: 163 VGIWGGYLVGVQWLGVFDGSYWSNMQSSVAFVDDILNGMLKSVVFGLVVTWIAVFQGYDL 222 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV S V+ +D + F Sbjct: 223 VPTSEGISRATTRTVVYSSLAVLGLDFVLTALMFG 257 >gi|303230190|ref|ZP_07316958.1| putative membrane protein [Veillonella atypica ACS-134-V-Col7a] gi|302515116|gb|EFL57090.1| putative membrane protein [Veillonella atypica ACS-134-V-Col7a] Length = 253 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 64/214 (29%), Positives = 113/214 (52%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +++QM ++GV +P++ L G V+ Q L +GA+ LM++ RE+G +L Sbjct: 40 VLQQMAHLGVDSLPIISLTLLFAGGVMTLQITDVLITYGAQGTVGGLMAVAMGRELGPIL 99 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 V++AGR G+AI AEIG+MK+ E+IDA+R M ++ + L+ PR+ A +I +P+L Sbjct: 100 VGVVLAGRVGAAITAEIGTMKVTEQIDALRVMAVNPIGYLVVPRVVACMIMVPILAFYGV 159 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I G V + A + +T+++ GLIK+ I +V +G Sbjct: 160 VIGIAGGYFVATTIKGLAPATYLDSIQMFSTISDFTLGLIKSSVFGAVIALVGCYKGMHT 219 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + + ++G T+ VV SI +V +++ + F Sbjct: 220 KMGAEAVGFSTTSSVVTSIILVFVLNYFLSTLLF 253 >gi|226953846|ref|ZP_03824310.1| toluene tolerance efflux ABC transporter membrane protein [Acinetobacter sp. ATCC 27244] gi|294651661|ref|ZP_06728964.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Acinetobacter haemolyticus ATCC 19194] gi|226835406|gb|EEH67789.1| toluene tolerance efflux ABC transporter membrane protein [Acinetobacter sp. ATCC 27244] gi|292822440|gb|EFF81340.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Acinetobacter haemolyticus ATCC 19194] Length = 258 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 66/209 (31%), Positives = 113/209 (54%), Gaps = 1/209 (0%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 S KG I QMY VGV + ++ + G V+ QG L G+E ++S+ Sbjct: 31 SMPSKGGFQRFIYQMYRVGVMSLLIISVSGLFIGLVLGLQGYSILVNVGSEAMLGTMVSL 90 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 LRE+ ++ A++ AGR+GSA+ AEIGSMK +E++ ++ +G+D ++ ++SPR+WA I+ Sbjct: 91 TLLRELAPVVAALLFAGRAGSALTAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIV 150 Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAI 324 SLP+LT++ I+G +V + + F+ S+ ++ G+IK+ A Sbjct: 151 SLPMLTVIFAAIGIVGGKLVGVDFLGVDEGSFWGGMQSSVQFGHDVVNGIIKSIVFALIC 210 Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 VA+ +G+A + +T VV S Sbjct: 211 TWVAVYQGYACDPTPEGIATSMTRTVVYS 239 >gi|223937293|ref|ZP_03629199.1| protein of unknown function DUF140 [bacterium Ellin514] gi|223894078|gb|EEF60533.1| protein of unknown function DUF140 [bacterium Ellin514] Length = 244 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 64/205 (31%), Positives = 111/205 (54%), Gaps = 2/205 (0%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 Q + +G + + +V ++SF G VIA L + G L+ I +E+ ++ ++ Sbjct: 32 QFFEIGNASLLMVCILSFFIGGVIALLTGPVLVERGLTNSVGGLVGISMAKELAPVMMSI 91 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 +IAGR GS++ AEIGSM++ +EIDA+RTM ++ + L+ PR+ A+ ++LPLL I + Sbjct: 92 LIAGRIGSSMTAEIGSMRVYQEIDALRTMNINPIHYLVLPRLTAIAVALPLLVIFSILVG 151 Query: 279 IIGASIVIWKYYDIP--FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 G ++V + I F FF+ ++ GL+K+ A IG+V +G Sbjct: 152 WGGGALVSALNHKIAVSFQAFFTNLREVVDFGDVINGLVKSFIFALVIGVVCCHQGLQTI 211 Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361 +G+ VT VV I +++I+D Sbjct: 212 GGPRGIGRSVTKAVVNCIVLIVILD 236 >gi|152972118|ref|YP_001337264.1| ABC transporter membrane protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206579237|ref|YP_002236394.1| hypothetical protein KPK_0517 [Klebsiella pneumoniae 342] gi|238896701|ref|YP_002921446.1| putative ABC transport system permease component [Klebsiella pneumoniae NTUH-K2044] gi|288933378|ref|YP_003437437.1| hypothetical protein Kvar_0495 [Klebsiella variicola At-22] gi|290511571|ref|ZP_06550940.1| ABC transporter, permease component YrbE [Klebsiella sp. 1_1_55] gi|329997630|ref|ZP_08302887.1| toluene tolerance protein Ttg2B [Klebsiella sp. MS 92-3] gi|150956967|gb|ABR78997.1| putative transport protein (ABC superfamily, membrane) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206568295|gb|ACI10071.1| putative membrane protein [Klebsiella pneumoniae 342] gi|238549028|dbj|BAH65379.1| putative ABC transport system permease component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|288888107|gb|ADC56425.1| protein of unknown function DUF140 [Klebsiella variicola At-22] gi|289776564|gb|EFD84563.1| ABC transporter, permease component YrbE [Klebsiella sp. 1_1_55] gi|328538940|gb|EGF64994.1| toluene tolerance protein Ttg2B [Klebsiella sp. MS 92-3] Length = 260 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 71/218 (32%), Positives = 118/218 (54%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y VGV + ++I+ G V+ QG L+ + AE L+++ LRE+G ++ Sbjct: 44 LVRQLYNVGVLSMLIIIVSGLFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ AGR+GSA+ AEIG M+ E++ ++ M +D +R +ISPR WA +ISLPLLTI+ Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFV 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 I G ++ V WK D F F++ + ++ LIK+ A + +A+ G Sbjct: 164 AVGIWGGALVGVSWKGIDGGF--FWTAMQNAVDWRMDLVNCLIKSLVFAITVTWIALFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV + V+ +D + F Sbjct: 222 YDAIPTSAGISRATTRTVVHASLAVLGLDFVLTALMFG 259 >gi|114798102|ref|YP_759452.1| hypothetical protein HNE_0724 [Hyphomonas neptunium ATCC 15444] gi|114738276|gb|ABI76401.1| putative membrane protein [Hyphomonas neptunium ATCC 15444] Length = 261 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 67/219 (30%), Positives = 116/219 (52%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 ++RQ+ +G +PVV L + GA +A S++GAE F ++ + RE+GV+ Sbjct: 43 EILRQIVRIGFYSLPVVGLAAVFIGAALALNIYEGGSRYGAEQFVPSIVVLGITRELGVV 102 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +T +M+AGR + I AEIG+M++ E+IDA+ T+ R L +PR A +I+LP+L LA Sbjct: 103 ITGLMLAGRVSAGIAAEIGAMRVTEQIDALETLSASRYRYLYAPRFIAALITLPMLVALA 162 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 + ++G +V D V+ TL +IF GLIKA I I+ +G Sbjct: 163 DIIGVMGGWLVSVYGLDFDSTVYLRNTLDFLTLNDIFAGLIKAVVFGGVIAIMGCYQGDR 222 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + +G+ T +V + +++ + + + + IG+ Sbjct: 223 SQAGATGVGRAATLSMVGAAVLILAFNYVMSTVFVEIGL 261 >gi|119510442|ref|ZP_01629575.1| hypothetical protein N9414_01612 [Nodularia spumigena CCY9414] gi|119464864|gb|EAW45768.1| hypothetical protein N9414_01612 [Nodularia spumigena CCY9414] Length = 265 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 106/201 (52%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + QM VG + + +L + GAV Q A + FGA ++++ RE+ +LT Sbjct: 42 VEQMAAVGPGSLFIALLTAVFVGAVFTIQVAREFINFGAANLVGGVLAVALTRELSPVLT 101 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV++AGR GSA AEIG+M++ E+IDA+ + D + L+ PR+ A + LP+LT+L+ Sbjct: 102 AVVLAGRVGSAFAAEIGTMRVTEQIDALFILKTDPIDYLVIPRLLACCLMLPILTLLSLI 161 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + I+G I+ Y I VF + + +I + LIKA I ++ G Sbjct: 162 TGILGGLIIATSIYGIADTVFLDSARNLVGIWDIISALIKACCFGLLIAVIGCSWGLTTK 221 Query: 337 VHSNSLGKKVTTCVVQSISIV 357 + +G+ TT VV S+ I+ Sbjct: 222 GGAKGVGQSTTTAVVTSLLII 242 >gi|303230959|ref|ZP_07317702.1| putative membrane protein [Veillonella atypica ACS-049-V-Sch6] gi|302514341|gb|EFL56340.1| putative membrane protein [Veillonella atypica ACS-049-V-Sch6] Length = 253 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/214 (29%), Positives = 113/214 (52%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +++QM ++GV +P++ L G V+ Q L +GA+ LM++ RE+G +L Sbjct: 40 VLQQMAHLGVDSLPIISLTLLFAGGVMTLQITDVLITYGAQGTVGGLMAVAMGRELGPIL 99 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 V++AGR G+AI AEIG+MK+ E+IDA+R M ++ + L+ PR+ A +I +P+L Sbjct: 100 VGVVLAGRVGAAITAEIGTMKVTEQIDALRVMAVNPIGYLVVPRVVACMIMVPILAFYGV 159 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I G V + A + +T+++ GLIK+ I +V +G Sbjct: 160 VIGIAGGYFVATAIKGLAPATYLDSIQMFSTISDFTLGLIKSSVFGAVIALVGCYKGMHT 219 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + + ++G T+ VV SI +V +++ + F Sbjct: 220 KMGAEAVGFSTTSSVVTSIILVFVLNYFLSTLLF 253 >gi|226227980|ref|YP_002762086.1| putative transporter [Gemmatimonas aurantiaca T-27] gi|226091171|dbj|BAH39616.1| putative transporter [Gemmatimonas aurantiaca T-27] Length = 264 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 68/210 (32%), Positives = 112/210 (53%), Gaps = 2/210 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLL 215 IRQM +GV VP+ ++++ G V A Q +QL G ++ + L++ + E+G LL Sbjct: 47 IRQMQRIGVESVPLTVIVAAFLGGVTAFQTRYQLFP-GVQLSVVGLIARQSIVLELGPLL 105 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA+++ GR G+ + AEIG+M++ E+IDA+ T+ D V L +PR A ++ LP L +LAN Sbjct: 106 TALVLTGRVGARMTAEIGTMRVTEQIDALETLAFDPVAYLATPRFIAGVVMLPTLVMLAN 165 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 +AI A + D+ + F T + LIKA AI V EG+ Sbjct: 166 ATAIFSAWATLVLATDVRTSDFLGGLRLAFTAFQVVYSLIKATCFGAAIAFVCSYEGYVT 225 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + +GK VV + ++++D++ A Sbjct: 226 EAGAEGVGKSTALAVVIASVSILVLDAIVA 255 >gi|158337358|ref|YP_001518533.1| hypothetical protein AM1_4236 [Acaryochloris marina MBIC11017] gi|158307599|gb|ABW29216.1| conserved hypothetical protein [Acaryochloris marina MBIC11017] Length = 249 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 66/205 (32%), Positives = 108/205 (52%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I QM VG + V +L + G V Q A + FG ++++ RE+ +LT Sbjct: 26 IEQMAIVGPESLLVALLTASFVGMVFTIQVAREFIAFGLVQTVGGVLALALTRELAPVLT 85 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV+I GR SA AEIG+M++ E+IDA++ + D V L+ PR+ A + LP+LT+++ Sbjct: 86 AVIITGRVCSAFAAEIGTMRVTEQIDALQMLDTDPVDYLVVPRLLACTLMLPILTLISLV 145 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + + G +V YDIP++VF HS + +I+ +IKA I IV G Sbjct: 146 AGVTGGMVVASVLYDIPYSVFLDSVHSFLGVWDIWNSMIKAAIFGGIIAIVGSSWGLTTY 205 Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361 + +G+ T VV ++ +V + + Sbjct: 206 GGAKGVGQSTTAAVVTALVMVFMTN 230 >gi|83593780|ref|YP_427532.1| hypothetical protein Rru_A2445 [Rhodospirillum rubrum ATCC 11170] gi|83576694|gb|ABC23245.1| Protein of unknown function DUF140 [Rhodospirillum rubrum ATCC 11170] Length = 389 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 65/214 (30%), Positives = 114/214 (53%) Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219 M G + + +V +++ + GA++A GA QL +FGA IF DL+ I +RE+ ++TA++ Sbjct: 176 MREAGANALVIVAIVNGLIGAILAFVGAVQLQRFGAGIFVADLVGIAMVREMAAVMTAIV 235 Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279 +AGR+G A A + +M+ NEEIDA++ +G+ L+ PR+ AL+ +PLL + + Sbjct: 236 MAGRTGGAYAAHLATMQGNEEIDALKVLGIPAYDFLVLPRVVALVTMMPLLYLYGCAIGL 295 Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339 +G +V D+ F + GL+K+ + + G G + Sbjct: 296 LGGFVVSLAILDMSATTFLDQIQGAIAGRQFAIGLVKSVAFGFLVALAGCHIGLRAGRSA 355 Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 +G+ T+ VV I VI +D++FA+ +GI Sbjct: 356 ADVGRAATSAVVVGIVGVIALDAVFAVCADRLGI 389 >gi|312898371|ref|ZP_07757761.1| conserved hypothetical protein [Megasphaera micronuciformis F0359] gi|310620290|gb|EFQ03860.1| conserved hypothetical protein [Megasphaera micronuciformis F0359] Length = 264 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 111/222 (50%), Gaps = 18/222 (8%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I QM ++GV P+V L G V+ Q L ++GA+ +MS+ RE+G +LT Sbjct: 52 INQMAHLGVDSFPIVALTMLFAGMVMTLQIVDILMRYGAQSTLGGIMSVAMGRELGPILT 111 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 V++AGR G+A+ AEIG+MK+ E+IDA+R M D V L+ PR A + +PLLT Sbjct: 112 GVVVAGRVGAAMTAEIGTMKVTEQIDALRCMATDPVAYLVVPRFVACVFMVPLLTFFGYL 171 Query: 277 SAIIGASIVIWKYYDIPFAVF------FSRFHST---ATLANIFTGLIKAPFMACAIGIV 327 G V AVF ++ HS ++++ GLIKA I +V Sbjct: 172 IGTGGGYCV---------AVFSAGLTDYTYMHSIEFFTEISDVLFGLIKAGVFGGIIALV 222 Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 A EG + +G+ T VV SI + I + + ++ + Sbjct: 223 ACFEGMHAKSGAEGVGQATTKSVVTSIIFIFITNYILSVILY 264 >gi|224588219|gb|ACN58843.1| ABC transporter permease protein [uncultured bacterium BLR12] Length = 264 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/255 (27%), Positives = 123/255 (48%), Gaps = 7/255 (2%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 N+ YH+ K + F + A L ++ + Y+F ++RQ Y +G Sbjct: 4 NTASKEKYHLSKSVDSFFINV---AQTLRFILDYFVQLFRPPYEFS----EIVRQCYKIG 56 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 +P++ L F+ G V +Q LS+FGA + L+ I + + L+TA++ AG+ Sbjct: 57 CDSLPLISLTGFIIGVVFTKQSRPSLSEFGATSWLPSLIGIAVFKALAPLVTALICAGKV 116 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 GS+I AE+G+MK+ E+I+A+ + L+ R+ A + LP+L + + +++G+ + Sbjct: 117 GSSIGAELGAMKVTEQIEAMDVSASKPYKYLVFTRVTACLFMLPILMLFTSLVSLMGSYL 176 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 I I A F + ++ LIKA IG+VA +GF + +GK Sbjct: 177 DISSNEHISLATFITNAFDKINFLDLKASLIKALVFGFTIGMVACYKGFNTIRGTEGVGK 236 Query: 345 KVTTCVVQSISIVII 359 VV S+ ++ I Sbjct: 237 AANAAVVTSMYLIFI 251 >gi|193215869|ref|YP_001997068.1| hypothetical protein Ctha_2170 [Chloroherpeton thalassium ATCC 35110] gi|193089346|gb|ACF14621.1| protein of unknown function DUF140 [Chloroherpeton thalassium ATCC 35110] Length = 264 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 68/204 (33%), Positives = 119/204 (58%), Gaps = 2/204 (0%) Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG-AEIFSIDLMSILQLREIG 212 L L+RQ+ + G + +V+LIS G +I +G L+ FG +++ + L+S++ RE+ Sbjct: 48 LVLLRQVLFTGYEALSIVVLISVSIGGLIILEGYSILANFGQSDLLYVILVSVIT-RELS 106 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 LLTA +I RSG+AI E+G+M +N EIDA+ ++G+ + L+ PR +++SL +L + Sbjct: 107 NLLTAFIIVARSGTAIATELGNMVVNHEIDALLSIGISPISYLVVPRTIGVVVSLLVLNV 166 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 N + I+G +V +Y I F VFFS+ + TL +I ++K+ AI I++ G Sbjct: 167 YFNITGILGGWMVSNWFYPIDFNVFFSKLLAKLTLVDISASILKSMLFGFAIAIISSFHG 226 Query: 333 FAVGVHSNSLGKKVTTCVVQSISI 356 V S + ++ VV S+++ Sbjct: 227 LQVNFASTEVPQRTIRAVVYSLTM 250 >gi|218248789|ref|YP_002374160.1| hypothetical protein PCC8801_4068 [Cyanothece sp. PCC 8801] gi|257061848|ref|YP_003139736.1| hypothetical protein Cyan8802_4107 [Cyanothece sp. PCC 8802] gi|218169267|gb|ACK68004.1| protein of unknown function DUF140 [Cyanothece sp. PCC 8801] gi|256592014|gb|ACV02901.1| protein of unknown function DUF140 [Cyanothece sp. PCC 8802] Length = 263 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 67/213 (31%), Positives = 108/213 (50%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + QM VG + + ++ + G V Q A + FGA +++I RE+ +LT Sbjct: 43 LEQMSVVGPESLTIALVTAGFVGMVFTIQVAREFIHFGAASTVGGVLAIALTRELSPVLT 102 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV++AGR GSA AEIG+M++ E+IDA+ + D + L+ PR+ A + LP+L ILA Sbjct: 103 AVVVAGRVGSAFAAEIGTMRVTEQIDALYVLKTDPIDYLVVPRVLACCMMLPVLNILALM 162 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + + G ++ YDI +F + L +I T LIK+ I ++ G Sbjct: 163 TGMAGGLLIADSLYDISPDLFLKSARNFLELWDIVTSLIKSAVFGGLIAVIGCSWGLTTT 222 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+ TT VV S+ V I + + F F Sbjct: 223 GGAKGVGQSTTTAVVTSLLAVFIANFFLSWFMF 255 >gi|325983137|ref|YP_004295539.1| hypothetical protein NAL212_2576 [Nitrosomonas sp. AL212] gi|325532656|gb|ADZ27377.1| protein of unknown function DUF140 [Nitrosomonas sp. AL212] Length = 265 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 61/215 (28%), Positives = 116/215 (53%), Gaps = 1/215 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +IR++Y+ GV + ++++ G V+ QG L ++G+E L+++ +RE+G ++ Sbjct: 47 VIRELYFTGVLSLIIIVVSGLFVGMVLGLQGYETLQKYGSESAVGTLVALSLVRELGPVV 106 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ A R+GSAI AEIG MK E++ A+ M +D + +++PR WA +IS+P L + + Sbjct: 107 AALLFASRAGSAITAEIGLMKATEQLAAMGMMAVDPIARVVAPRFWAGVISMPFLAAMFS 166 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 + G +V + + ++S+ S +I G IK+ F A+ +A+ EG+ Sbjct: 167 VMGVFGGYLVTVIFIGVDEGSYWSQMQSAVDFRFDILNGFIKSCFFGVAVTAIAVFEGYD 226 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + + T VV S +++ +D + F F Sbjct: 227 APPTAEGVSGATTRTVVTSSLVILGLDFILTAFMF 261 >gi|91774594|ref|YP_544350.1| hypothetical protein Mfla_0238 [Methylobacillus flagellatus KT] gi|91708581|gb|ABE48509.1| protein of unknown function DUF140 [Methylobacillus flagellatus KT] Length = 263 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/259 (26%), Positives = 137/259 (52%), Gaps = 8/259 (3%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 +++ N+ IG +++ + + V+ +GE F+ L+ IR++Y+ Sbjct: 2 FSAVANMLRGIGHRVIDRLWRFGAGIRFFFYVLIYSGE------SFRRLHLT-IREIYFT 54 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 GV + ++++ +F G V+A QG L ++G+ L+++ +RE+G ++TA++ AGR Sbjct: 55 GVLSLIIILVSAFFVGMVLALQGYNTLQRYGSSEAIGVLVALSLVRELGPVVTALLFAGR 114 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 +G+AI AEIG M+ E++ A+ M + + +++PR WA + S+PLL L + ++G Sbjct: 115 AGTAITAEIGLMRATEQLSAMEMMAVSPIARVVAPRFWAGLFSMPLLAALFSMVGVLGGY 174 Query: 284 IVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 +V + F+S+ ++ +I G+IK+ A ++A+ EGF + + Sbjct: 175 LVAVPLIGVDAGAFWSQMQASVDFREDIVNGVIKSLVFGIACTMIALFEGFDAPPTAEGV 234 Query: 343 GKKVTTCVVQSISIVIIID 361 + T VV S V+ +D Sbjct: 235 SRATTRTVVNSSLAVLGLD 253 >gi|227538358|ref|ZP_03968407.1| ABC superfamily ATP binding cassette transporter permease protein [Sphingobacterium spiritivorum ATCC 33300] gi|300774198|ref|ZP_07084065.1| ABC superfamily ATP binding cassette transporter permease protein [Sphingobacterium spiritivorum ATCC 33861] gi|227241873|gb|EEI91888.1| ABC superfamily ATP binding cassette transporter permease protein [Sphingobacterium spiritivorum ATCC 33300] gi|300758877|gb|EFK55706.1| ABC superfamily ATP binding cassette transporter permease protein [Sphingobacterium spiritivorum ATCC 33861] Length = 252 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 107/208 (51%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +IRQ Y +G +P++ + F+ G V +Q L +FGA + L+SI +R + L+ Sbjct: 36 IIRQCYEIGWRSLPLISVTGFIVGFVFTKQSRPSLEEFGATSWLPSLISIAIIRALAPLV 95 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ +G+ GS I AE+ SM + E+IDA+ G + + LI R+WA I +P+L Sbjct: 96 TALIASGKVGSQIGAELSSMNVTEQIDAMEVSGTNPFKFLIVSRVWATTIGIPILCFYTA 155 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 ++G + I D+ F FF++ +IF + +A IG V+ G+ Sbjct: 156 GIGLLGGYLSIASKDDVSFLSFFTQVFEAIAYKDIFAMVFRAVVFGFTIGAVSSYCGYFS 215 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + +GK + VV S+ IV I + L Sbjct: 216 SKGTEGVGKAANSAVVASMFIVFIEEIL 243 >gi|189218795|ref|YP_001939436.1| organic solvents resistance ABC-type transport system permease component [Methylacidiphilum infernorum V4] gi|189185653|gb|ACD82838.1| organic solvents resistance ABC-type transport system permease component [Methylacidiphilum infernorum V4] Length = 258 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 70/253 (27%), Positives = 130/253 (51%), Gaps = 8/253 (3%) Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171 Y +G +KF+ + I L++ F + +++ FL+ Q+ +G +V Sbjct: 3 YRVGSLFIKFLK---ATGEIFFLLLDTLYSFFSFPLRWRLFLM----QILTIGAKSQIIV 55 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 ++ TGAV A Q F + G + ++++ LRE+G +L A+M++GR GSA+ AE Sbjct: 56 LVTGAFTGAVFAAQVQFHFGKLGMSSATGPVVTLAMLRELGPVLCALMVSGRVGSAMAAE 115 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 I +MK+ E+IDA+R++G+ + LI PR L++S+PLL + + I+ +V Sbjct: 116 ISTMKVTEQIDALRSLGVYVTQYLIVPRFLGLVVSMPLLVAITSGVGILCGYLVSVPLLG 175 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 + A ++ +L +++ G +K F I +++ G + + +G T +V Sbjct: 176 VEPAYYWENTIRFTSLDDVWMGELKGMFFGGLIVLISCYRGLNCQLSAEGVGIAATQAMV 235 Query: 352 QSISIVIIIDSLF 364 S SI I+I + F Sbjct: 236 YS-SIAILISNFF 247 >gi|290968738|ref|ZP_06560276.1| putative membrane protein [Megasphaera genomosp. type_1 str. 28L] gi|290781391|gb|EFD93981.1| putative membrane protein [Megasphaera genomosp. type_1 str. 28L] Length = 253 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 72/220 (32%), Positives = 117/220 (53%), Gaps = 14/220 (6%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I QM +GV +P+V L G V+ Q L ++GA+ MS+ RE+G +LT Sbjct: 41 IYQMAKLGVDSLPIVSLTLLFAGMVMTLQIVDILLRYGAQSTLGGAMSVSMGRELGPILT 100 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 V++AGR G+A+ AEIG+MK+ E+IDA+R + ++ + L+ PR A ++ +PL LA + Sbjct: 101 GVVMAGRVGAAMTAEIGTMKVTEQIDALRCLAVNPIAYLVVPRFVACVLMVPL---LAFY 157 Query: 277 SAIIGA----SIVIWKYYDIPFAVFFSRFHSTATL---ANIFTGLIKAPFMACAIGIVAM 329 +IG ++ +W F+ +S A L +I GLIKA F I ++A Sbjct: 158 GYVIGTAGGYAVAVWG----AGLAHFTYVNSIAVLTAVGDIVYGLIKAMFFGGIIAVIAC 213 Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 EGF + +G+ T VV SI + I + + ++ + Sbjct: 214 YEGFHAESGAEGVGRATTKSVVTSIVFIFICNYILSVILY 253 >gi|24214757|ref|NP_712238.1| ABC transporter membrane protein [Leptospira interrogans serovar Lai str. 56601] gi|45657720|ref|YP_001806.1| ABC transporter permease protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24195758|gb|AAN49256.1| membrane protein of an ABC transporter complex [Leptospira interrogans serovar Lai str. 56601] gi|45600960|gb|AAS70443.1| ABC transporter permease protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 259 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 67/218 (30%), Positives = 113/218 (51%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 ++ QMY GV + VV +++ TG +++ L FGAE LM+I RE+ + Sbjct: 40 ILDQMYITGVGSISVVSIVAVFTGMIMSLNTGLGLKDFGAEGQIGLLMTITLTREMSPFM 99 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA+++A GSA+ AEIG+MK++EE+DA+ M +D VR LI PRI + +P+L + + Sbjct: 100 TALILAASIGSAMAAEIGTMKVSEEVDALEVMSIDPVRYLIFPRILGFSVMVPVLCVYST 159 Query: 276 FSAIIGASIVIWKYYDIPFAVF----FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 I+G +IV + I + + F R S L +++ G++K + ++ Sbjct: 160 ALGILGGAIVGYFQLGIDYFTYFRDVFDRIASIPGLKDLYVGILKGFIFGIIVSAISCSH 219 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF-AIFY 368 G + +G+ VV S +VI + A+FY Sbjct: 220 GLRTSGGAIGVGRATRESVVASFLMVIFTGYMITALFY 257 >gi|162448883|ref|YP_001611250.1| putative ABC transporter permease protein [Sorangium cellulosum 'So ce 56'] gi|161159465|emb|CAN90770.1| putative ABC transporter permease protein [Sorangium cellulosum 'So ce 56'] Length = 287 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 67/205 (32%), Positives = 105/205 (51%), Gaps = 1/205 (0%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 S + QM +GV + + + G V+A Q A L +FG ++ ++ + RE+ Sbjct: 67 STLYQMEALGVRSAAIASVTALFVGMVMAVQFAIGLQKFGGMEYTGRIIGLSFSRELAPT 126 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 LTAV++ GR G+ I AE+GSM + E+IDAIR +G ++ L+ PR+ A I+ +P+L A Sbjct: 127 LTAVIVGGRIGAGIAAEVGSMAVTEQIDAIRALGASPLKKLVLPRLLASIVVMPVLGAFA 186 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 GA +V + IP F + T + F+G+ K PF I +V G Sbjct: 187 LVLGFGGAMLVCATEFGIPAGFFLRTALGSVTFMDYFSGMYKTPFFGAIIALVGCHFGLI 246 Query: 335 VGVHSNSLGKKVT-TCVVQSISIVI 358 + +G T T VV SI+I+I Sbjct: 247 TRGGTEGVGHATTRTVVVTSITILI 271 >gi|160872193|ref|ZP_02062325.1| toluene tolerance protein Ttg2B [Rickettsiella grylli] gi|159120992|gb|EDP46330.1| toluene tolerance protein Ttg2B [Rickettsiella grylli] Length = 262 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 117/215 (54%), Gaps = 1/215 (0%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 +F+ LI Q+Y++GV + ++++ G V+ QG L++FGA L+++ Sbjct: 37 RFRKSFPLLIEQLYFIGVLSLIIMVISGLFIGMVVGLQGYNTLNKFGASQQLGQLVALSV 96 Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267 +RE+G ++TA++ AGR+GSA+ AEIG MK E++ ++ MG+D + +ISPR W IS+ Sbjct: 97 VRELGPVITALLFAGRAGSALTAEIGLMKSTEQLASMEMMGIDPLWRVISPRFWGGFISM 156 Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGI 326 P L I+ + AI G +V + + F+S S +I G+IK+ + Sbjct: 157 PFLMIIFSTVAIWGGYLVGVVWLGVDGGTFWSAMQSAVNFHDDIINGIIKSIVFGGVVTW 216 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 +A+ +G+ +G+ T VV S ++ +D Sbjct: 217 IAVFQGYDTIPTPQGVGRATTHTVVYSSLAILGLD 251 >gi|193215278|ref|YP_001996477.1| hypothetical protein Ctha_1571 [Chloroherpeton thalassium ATCC 35110] gi|193088755|gb|ACF14030.1| protein of unknown function DUF140 [Chloroherpeton thalassium ATCC 35110] Length = 265 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 118/213 (55%), Gaps = 2/213 (0%) Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209 K + ++ Q Y G +P+V++ S G+++ + QL +FGA++ + ++ +R Sbjct: 41 KKYWRDILNQAYISGTESIPIVLVSSISIGSLLTMEVGNQLEEFGAKLMTGRTTALSVIR 100 Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLP 268 E+G +LT +M++ R G+ +E+G+MKI+E+IDA+R G D + L+ PR+ A L++ LP Sbjct: 101 ELGPMLTGLMLSARVGARNGSELGAMKISEQIDALRAFGTDPIAKLVMPRLIASLLMFLP 160 Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328 LT L++F+ + +++ Y+ I +++ + + + G +K P A I +V+ Sbjct: 161 -LTALSDFAGLTSGALIAEHYHHIDPGFYWNSVLNLLIVKDFVVGFLKPPVFAVIITLVS 219 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 GF + +G+ +V S +V+I + Sbjct: 220 CFNGFDATGGTAGVGRSTIKGIVVSSGLVLIAN 252 >gi|225850834|ref|YP_002731068.1| ABC-type transport system involved in resistance to organic solvents, permease component [Persephonella marina EX-H1] gi|225645536|gb|ACO03722.1| ABC-type transport system involved in resistance to organic solvents, permease component [Persephonella marina EX-H1] Length = 248 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 62/194 (31%), Positives = 104/194 (53%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +++ M +GV+ P++ + F TG V+ + +F AE L+S+ RE+ +L Sbjct: 35 ILKYMEEIGVTAAPLIAITGFFTGGVLVVETYPTFHKFNAEFLIGALVSLSLSRELSPVL 94 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A+++ RSGSA+ A IG+MKI E+IDA++ M ++ VR LI+PR+ A ++ +P L IL+ Sbjct: 95 VALLVTARSGSAMAANIGTMKITEQIDALKVMAVNPVRYLIAPRLIASLLMVPALVILSY 154 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 ++G V Y I +F + L +I GL K+ A I IV+ G+ Sbjct: 155 TFGLLGGYFVGVNLYGINPYLFVEKMKDFTELYDILGGLYKSMGFATIITIVSCYFGYVT 214 Query: 336 GVHSNSLGKKVTTC 349 + +G+ TT Sbjct: 215 KGGAEGVGRSTTTA 228 >gi|220905696|ref|YP_002481007.1| hypothetical protein Cyan7425_0250 [Cyanothece sp. PCC 7425] gi|219862307|gb|ACL42646.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7425] Length = 248 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 66/205 (32%), Positives = 108/205 (52%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + QM VG + V ++ + G V Q A + FGA +++I RE+ +LT Sbjct: 26 LEQMSVVGPESLLVALITATFVGMVFTIQVAREFINFGAVSAVGGVLAIALTRELAPVLT 85 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV++AGR GSA AEIG+M++ E+IDA+ + D V L+ PR A + LP+LT+LA Sbjct: 86 AVILAGRVGSAFAAEIGTMRVTEQIDALYLLSTDPVDYLVLPRFLACCLMLPVLTLLALV 145 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 +A+ G ++ Y IPF++F S L +I++ ++K+ + I+ G Sbjct: 146 TAMGGGMLLAESLYGIPFSLFLDSAKSFLELWDIWSAVLKSIVFGALVAIIGCNWGLTTS 205 Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361 + +G+ T VV S+ + I D Sbjct: 206 GGAKGVGQSTTAAVVISLLSIFIAD 230 >gi|59802415|ref|YP_209127.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae FA 1090] gi|194100076|ref|YP_002003216.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae NCCP11945] gi|239998068|ref|ZP_04717992.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae 35/02] gi|240079831|ref|ZP_04724374.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae FA19] gi|240112039|ref|ZP_04726529.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae MS11] gi|240116987|ref|ZP_04731049.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae PID1] gi|240122625|ref|ZP_04735581.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae PID332] gi|240127329|ref|ZP_04739990.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae SK-93-1035] gi|268593920|ref|ZP_06128087.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae 35/02] gi|268595976|ref|ZP_06130143.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae FA19] gi|268598097|ref|ZP_06132264.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae MS11] gi|268602671|ref|ZP_06136838.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID1] gi|268681221|ref|ZP_06148083.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID332] gi|268685698|ref|ZP_06152560.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae SK-93-1035] gi|59719310|gb|AAW90715.1| putative abc transport protein, inner membrane protein [Neisseria gonorrhoeae FA 1090] gi|193935366|gb|ACF31190.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae NCCP11945] gi|268547309|gb|EEZ42727.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae 35/02] gi|268549764|gb|EEZ44783.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae FA19] gi|268582228|gb|EEZ46904.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae MS11] gi|268586802|gb|EEZ51478.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID1] gi|268621505|gb|EEZ53905.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID332] gi|268625982|gb|EEZ58382.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae SK-93-1035] Length = 258 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 118/215 (54%), Gaps = 3/215 (1%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215 +RQ+Y+ GV V +V + G V+ QG QLS+F A+I + + L LRE+G +L Sbjct: 43 VRQVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASL-LRELGPVL 101 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ A +G A+ +EIG MK +++A+ M ++ V +++PR WA + S+PLL + N Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTGQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFN 161 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 + I GA +V + + +F+ + + T+ ++ GLIK+ A+ ++A+ +GF Sbjct: 162 VAGIFGAYLVGVSWLGLDSGIFWPQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFH 221 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 S + + T VV S ++ +D + + F Sbjct: 222 CIPTSEGILRASTRTVVSSALTILAVDFILTAWMF 256 >gi|328951866|ref|YP_004369200.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM 11109] gi|328452190|gb|AEB08019.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM 11109] Length = 274 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 63/211 (29%), Positives = 111/211 (52%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 RQ+Y +G G P+V L + G I + QL++ G E F +L+ I+ +RE+G +LTA Sbjct: 62 RQIYLIGGRGWPIVALTGMLLGLAIIVYASAQLAKIGGEQFVGNLLVIIVIRELGPVLTA 121 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +++ RSG+A++ EIG M + EI+A+ MGL+ ++ PR W L+ISL L + Sbjct: 122 LLVLLRSGAAMIVEIGGMVLEREIEALELMGLEPEIVIGGPRFWGLVISLITLYFIFVVC 181 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 A+ G + + D+ + VF+ F + ++ K IG+VA+ G Sbjct: 182 AVWGGFLFSQIFADMYWGVFWLSFVNALGWPDLVLNFAKVVLFGMFIGVVAIYHGLQTAD 241 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 H S+ + + V S+ + +I++ ++ Y Sbjct: 242 HWESIVAQTSRGAVISLLFLGLINTALSVLY 272 >gi|240013249|ref|ZP_04720162.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae DGI18] gi|240015696|ref|ZP_04722236.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae FA6140] gi|240114786|ref|ZP_04728848.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae PID18] gi|240120321|ref|ZP_04733283.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae PID24-1] gi|240124812|ref|ZP_04737698.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae SK-92-679] gi|254492848|ref|ZP_05106019.1| ABC transporter inner membrane subunit [Neisseria gonorrhoeae 1291] gi|260441401|ref|ZP_05795217.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae DGI2] gi|268600440|ref|ZP_06134607.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID18] gi|268683391|ref|ZP_06150253.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae SK-92-679] gi|291044759|ref|ZP_06570468.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae DGI2] gi|293397855|ref|ZP_06642061.1| ABC transport system permease [Neisseria gonorrhoeae F62] gi|226511888|gb|EEH61233.1| ABC transporter inner membrane subunit [Neisseria gonorrhoeae 1291] gi|268584571|gb|EEZ49247.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID18] gi|268623675|gb|EEZ56075.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae SK-92-679] gi|291011653|gb|EFE03649.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae DGI2] gi|291611801|gb|EFF40870.1| ABC transport system permease [Neisseria gonorrhoeae F62] gi|317165512|gb|ADV09053.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae TCDC-NG08107] Length = 258 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 118/215 (54%), Gaps = 3/215 (1%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSILQLREIGVLL 215 +RQ+Y+ GV V +V + G V+ QG QLS+F A+I + + L LRE+G +L Sbjct: 43 VRQVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASL-LRELGPVL 101 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ A +G A+ +EIG MK +++A+ M ++ V +++PR WA + S+PLL + N Sbjct: 102 AAILFASSAGGAMTSEIGLMKTTGQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFN 161 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 + I GA +V + + +F+ + + T+ ++ GLIK+ A+ ++A+ +GF Sbjct: 162 VAGIFGAYLVGVSWLGLDSGIFWPQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFH 221 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 S + + T VV S ++ +D + + F Sbjct: 222 CIPTSEGILRASTRTVVSSALTILAVDFILTAWMF 256 >gi|42524770|ref|NP_970150.1| ABC transporter, permease protein [Bdellovibrio bacteriovorus HD100] gi|39576980|emb|CAE78209.1| ABC transporter, permease protein [Bdellovibrio bacteriovorus HD100] Length = 262 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 54/190 (28%), Positives = 107/190 (56%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 Q+Y +G+ +P++++ + G V++ Q L +FG +++ L+++ LRE+G + T+ Sbjct: 45 EQIYQIGMRSLPLIVITAVSIGMVMSLQFGMGLEKFGGKLYVPKLLAVTILREMGPVFTS 104 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +M+A R G+ I +EIGSM + ++IDAIR +G ++ ++ PR+ A +I+LP+L +AN Sbjct: 105 LMLAARVGAGIASEIGSMVVTQQIDAIRALGTSPIKKIVIPRVLACLITLPILVSIANIV 164 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 +G I+ ++ ++ + +T+ + + +G K F A I I + G V Sbjct: 165 GNLGGLIIGATELNLDPNFYYLKVMTTSNIQDYLSGFAKTFFFAIFIAIPSCYFGLNVKA 224 Query: 338 HSNSLGKKVT 347 + +G T Sbjct: 225 GTKEVGIATT 234 >gi|326405357|ref|YP_004285439.1| putative ABC transporter permease [Acidiphilium multivorum AIU301] gi|325052219|dbj|BAJ82557.1| putative ABC transporter permease protein [Acidiphilium multivorum AIU301] Length = 260 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 63/217 (29%), Positives = 115/217 (52%), Gaps = 8/217 (3%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 R + +G S +PVV L + TG V+A Q S+F + ++ + RE+G +L Sbjct: 48 RALMEIGYSSLPVVALTAVFTGMVLALQSYIGFSRFDSSSVIASVVVLSLTRELGPVLAG 107 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +M+AGR+GSAI AE+G+M++ ++IDA+ T+ D +R L++PR+ A +I+LPLL ++A+ Sbjct: 108 LMVAGRAGSAIAAEMGTMRVTDQIDALTTLATDPMRYLVTPRLLAGVIALPLLVVIADIL 167 Query: 278 AIIGASIVIWKYYDIPFAVFF----SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 + G +V + + HS ++ +GL+KA I ++ G+ Sbjct: 168 GVAGGFLVSTVRLGFEPNAYLRDTVNYLHSN----DVVSGLVKAAVFGFVIALMGCFHGY 223 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +G T VV + +++ +D L +F+ Sbjct: 224 RSRGGAQGVGGATTAAVVSASVLILALDYLMTQAFFS 260 >gi|116747921|ref|YP_844608.1| hypothetical protein Sfum_0473 [Syntrophobacter fumaroxidans MPOB] gi|116696985|gb|ABK16173.1| protein of unknown function DUF140 [Syntrophobacter fumaroxidans MPOB] Length = 258 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 73/225 (32%), Positives = 124/225 (55%), Gaps = 6/225 (2%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G A + G LS+++Q+ ++G V+ + TG V+A QG + L+ G+E + Sbjct: 24 GRMLAGITRPPGKFLSVVKQIQFIGTKSFLVIGFTAIFTGMVLALQGYYALASVGSEGWL 83 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 +S+ +RE+G +LTA+M+ GR+GSA+ AEIG M+I+E+IDAI M +D LI+PR Sbjct: 84 GKAVSLSLIRELGPVLTALMVTGRAGSAMCAEIGIMRIDEQIDAIECMAIDPHSYLITPR 143 Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319 + A +I+LPLLT + I+G +V + + S+ +++ G++K+ Sbjct: 144 LLAALIALPLLTAFCDVVGIVGGYLVGVNLLGVNAGAYLDSMESSVVWKDVYMGIVKSIC 203 Query: 320 MACAIGIVAMKEGFAVGVHSNSLGK----KVTT--CVVQSISIVI 358 I + +G+ GV N+ G + TT V+ SISI++ Sbjct: 204 FGVLIIWICTYKGYYAGVDENNFGPEQVSRATTNAVVLSSISILV 248 >gi|85713028|ref|ZP_01044065.1| ABC-type transport system involved in resistance to organic solvents, permease component [Idiomarina baltica OS145] gi|85693131|gb|EAQ31092.1| ABC-type transport system involved in resistance to organic solvents, permease component [Idiomarina baltica OS145] Length = 258 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 63/215 (29%), Positives = 117/215 (54%), Gaps = 1/215 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 ++QMY VGV + ++++ G V+ QG L +GAE ++++ LRE+G ++T Sbjct: 43 VQQMYVVGVLSLIIIVVSGLFIGMVLGLQGYTILVDYGAEQSLGPMVALSLLRELGPVVT 102 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+GSA+ AEIG MK E++ ++ M +D +R +++PR WA +S+PLL ++ + Sbjct: 103 ALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVVAPRFWAGFVSMPLLALIFSA 162 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAV 335 I G +V + + F+S S ++ G+IK+ A + +A+ +G+ Sbjct: 163 VGIYGGYLVGSGWLGVDEGAFWSVMQSAVDWRDDLMNGIIKSLVFAFVVTWIALYKGYRC 222 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + K T+ VV + ++ +D + F Sbjct: 223 EPTSAGISKATTSTVVTASLAILGLDFILTALMFG 257 >gi|304437504|ref|ZP_07397462.1| ABC superfamily ATP binding cassette transporter permease protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369554|gb|EFM23221.1| ABC superfamily ATP binding cassette transporter permease protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 255 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 111/215 (51%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 S++ QM ++G + +V L TG V+ Q A + ++GA+ +++I RE+G + Sbjct: 41 SIVYQMAHLGADSLLIVGLTLLFTGIVLTLQIAHEFIRYGAQSTIGAVIAIGIGRELGPV 100 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 L V+ AGR G+AI AE+ +MK+ E+IDA+R M + V LI PR+ A ++ +P+LT+ Sbjct: 101 LVGVVCAGRVGAAITAEVSTMKVTEQIDALRVMAVSPVNYLIVPRMLACMVVVPILTVFG 160 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 + ++G Y I F A L ++ GLIKA F I ++ G Sbjct: 161 DVIGVLGGYFTAVYYSGISGYTFLHSITQYALLYDMTGGLIKAIFFGNVIAVLGCYYGLH 220 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G VV SI ++ I++++ F F Sbjct: 221 APSGAEGVGTATMQTVVTSIIVIFILNAVLTFFLF 255 >gi|39995923|ref|NP_951874.1| hypothetical protein GSU0817 [Geobacter sulfurreducens PCA] gi|39982687|gb|AAR34147.1| conserved hypothetical protein [Geobacter sulfurreducens PCA] gi|298504937|gb|ADI83660.1| transporter membrane protein of unknown function DUF140 [Geobacter sulfurreducens KN400] Length = 257 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 119/204 (58%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q++++G + V++L + TG V+ QG + L++FG+E +++ +RE+G +L+A Sbjct: 46 KQIHFIGAKSLFVIVLTAAFTGMVLGLQGYYTLAKFGSEGMLGSAVALSLIRELGPVLSA 105 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +M+ GR+GSAI AEIG KI E+IDA++TM L+ + L+SP+I A +I+LPLL + + Sbjct: 106 LMVVGRAGSAITAEIGIKKITEQIDALKTMALEPFKYLVSPKILAALIALPLLCAIFDVV 165 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 I G +V K + +FS + ++++G++K+ I V +G+ Sbjct: 166 GIYGGYVVGVKLLGVNPGAYFSEMERSVEWKDVWSGIVKSFSFGGIIAWVCCYKGYHASH 225 Query: 338 HSNSLGKKVTTCVVQSISIVIIID 361 + + + T VV S +V+I D Sbjct: 226 GAEGVSRATTEAVVMSSVLVLIWD 249 >gi|154253915|ref|YP_001414739.1| hypothetical protein Plav_3483 [Parvibaculum lavamentivorans DS-1] gi|154157865|gb|ABS65082.1| protein of unknown function DUF140 [Parvibaculum lavamentivorans DS-1] Length = 257 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 64/202 (31%), Positives = 111/202 (54%), Gaps = 1/202 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +QM +G +PVV L +F TG +A Q + + F +E ++++ RE+G +L Sbjct: 44 QQMLRIGYFSLPVVALTAFFTGGALALQIYYGGNSFNSESIVATIVALGITRELGPVLGG 103 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +M+AGR +AI AE+G+M++ E+IDA+ T+ + + L+ PR+ A +I+LPLL ++A+ Sbjct: 104 LMVAGRVSAAIAAELGTMRVTEQIDALTTLSTNPHKYLVVPRVVAAVITLPLLVLVADII 163 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 I+G +V D V+ L ++ +GLIKA I ++ GF Sbjct: 164 GIMGGYVVGTASLDFNGGVYIKNTADFLKLDDVTSGLIKAAVFGFIIAVMGCFHGFNSKG 223 Query: 338 HSNSLGKKVTTCVVQSISIVII 359 + +G+ T VV + SI+I+ Sbjct: 224 GAQGVGRATTNAVVTA-SILIL 244 >gi|238928172|ref|ZP_04659932.1| ABC superfamily ATP binding cassette transporter permease protein [Selenomonas flueggei ATCC 43531] gi|238884132|gb|EEQ47770.1| ABC superfamily ATP binding cassette transporter permease protein [Selenomonas flueggei ATCC 43531] Length = 255 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 111/215 (51%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 S+I QM ++G + +V L TG V+ Q A + ++GA+ +++I RE+G + Sbjct: 41 SIIYQMAHLGADSLLIVGLTLLFTGIVLTLQIAHEFIRYGAQSTIGAVIAIGIGRELGPV 100 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 L V+ AGR G+AI AE+ +MK+ E+IDA+R M + V LI PR+ A ++ +P+LT+ Sbjct: 101 LVGVVCAGRVGAAITAEVSTMKVTEQIDALRVMAVSPVNYLIVPRMLACMVVVPILTVFG 160 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 + ++G Y I F A + ++ GLIKA F I ++ G Sbjct: 161 DVIGVLGGYFTAVYYSGISGYTFLHSITQYAEIYDMTGGLIKAIFFGNVIAVLGCHYGLN 220 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G VV SI ++ I++++ F F Sbjct: 221 APGGAEGVGTATMQTVVTSIIVIFILNAVLTFFLF 255 >gi|148261852|ref|YP_001235979.1| hypothetical protein Acry_2870 [Acidiphilium cryptum JF-5] gi|146403533|gb|ABQ32060.1| protein of unknown function DUF140 [Acidiphilium cryptum JF-5] Length = 260 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 63/217 (29%), Positives = 115/217 (52%), Gaps = 8/217 (3%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 R + +G S +PVV L + TG V+A Q S+F + ++ + RE+G +L Sbjct: 48 RALMEIGYSSLPVVALTAVFTGMVLALQSYVGFSRFDSSSVIASVVVLSLTRELGPVLAG 107 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +M+AGR+GSAI AE+G+M++ ++IDA+ T+ D +R L++PR+ A +I+LPLL ++A+ Sbjct: 108 LMVAGRAGSAIAAEMGTMRVTDQIDALTTLATDPMRYLVTPRLLAGVIALPLLVVIADIL 167 Query: 278 AIIGASIVIWKYYDIPFAVFF----SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 + G +V + + HS ++ +GL+KA I ++ G+ Sbjct: 168 GVAGGFLVSTVRLGFEPNAYLRDTVNYLHSN----DVVSGLVKAAVFGFVIALMGCFHGY 223 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +G T VV + +++ +D L +F+ Sbjct: 224 RSRGGAQGVGGATTAAVVSASVLILALDYLMTQAFFS 260 >gi|222055035|ref|YP_002537397.1| protein of unknown function DUF140 [Geobacter sp. FRC-32] gi|221564324|gb|ACM20296.1| protein of unknown function DUF140 [Geobacter sp. FRC-32] Length = 257 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 60/212 (28%), Positives = 116/212 (54%), Gaps = 1/212 (0%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 Q+ +GV + +VIL TG V+A Q QL F A + ++++ ++E+G +L+++ Sbjct: 44 QLDKIGVGSLFIVILTGLFTGMVMALQALIQLKPFAATSYVGGMVAVTMVKELGPVLSSL 103 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 M+AGR GSAI AE+G+M + E++DA++ G D ++ L++ R+ A++I++PLL I+ + + Sbjct: 104 MVAGRVGSAITAELGTMVVTEQVDAMQVEGTDIIKRLVTSRLKAIVIAMPLLAIITDAVS 163 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 ++G I + YDI +++ ++ G++K I +V G + Sbjct: 164 LVGGYI-MAANYDINIIMYWKSIPQFMVFQDLIEGVVKPAVFGFIIAMVGCHVGLSTNGG 222 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +G+ VV S +++ D A + A Sbjct: 223 AAGVGESAKRAVVISSVSILVTDFFIAKIFIA 254 >gi|82703861|ref|YP_413427.1| hypothetical protein Nmul_A2748 [Nitrosospira multiformis ATCC 25196] gi|82411926|gb|ABB76035.1| Protein of unknown function DUF140 [Nitrosospira multiformis ATCC 25196] Length = 265 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 115/215 (53%), Gaps = 1/215 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +IR++Y+ GV + ++++ G V+ QG L ++GAE ++++ LRE+G ++ Sbjct: 47 VIRELYFTGVQSLIIILVSGLFVGMVLGLQGFETLQRYGAESAVGTMVALSLLRELGPVV 106 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 +A++ A R+GSAI AEIG MK E++ A+ M +D + +++PR WA +IS+PLL L + Sbjct: 107 SALLFASRAGSAITAEIGLMKATEQLAAMEMMAVDPIARVVAPRFWAGVISMPLLAALFS 166 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G +V + F+S+ S ++ G+IK A+ +A+ EG+ Sbjct: 167 AIGIYGGYLVAVVLIGVDEGSFWSQMQSAVDFRYDVVNGIIKTCVFGIAVTAIAVFEGYD 226 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + + T VV S ++ +D + F F Sbjct: 227 AAPTAEGVSGATTRTVVTSSLAILGLDFILTSFMF 261 >gi|22298988|ref|NP_682235.1| hypothetical protein tlr1445 [Thermosynechococcus elongatus BP-1] gi|22295170|dbj|BAC08997.1| ycf63 [Thermosynechococcus elongatus BP-1] Length = 267 Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 111/209 (53%) Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 L +LI QM VG + + V ++ + G V Q A + FGA +++I RE+G Sbjct: 41 LRNLIEQMALVGPASLSVALITAAFVGMVFTIQVAREFIAFGATSAVGGVLAIALARELG 100 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 +LTAV++AGR GSA AEIG+MK+ E+IDA+ +G + V L+ PR A ++ LP+L I Sbjct: 101 PVLTAVVLAGRVGSAFAAEIGTMKVTEQIDALYMLGTNPVDYLVVPRFIACVVMLPILNI 160 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 LA + + G I+ Y IP V+ + ++++ +IK+ + I+ G Sbjct: 161 LALVTGLWGGLIIGDYLYGIPPGVYIESIQNFLQTWDLWSSIIKSGIFGGVVAIIGCSWG 220 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + +G+ T VV S+ + I++ Sbjct: 221 ITTTGGAKGVGQSTTAAVVISLLAIFILN 249 >gi|149378023|ref|ZP_01895747.1| ABC-type transport system involved in resistance to organic solvents, permease component [Marinobacter algicola DG893] gi|149357678|gb|EDM46176.1| ABC-type transport system involved in resistance to organic solvents, permease component [Marinobacter algicola DG893] Length = 259 Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 65/212 (30%), Positives = 120/212 (56%), Gaps = 2/212 (0%) Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210 GF L L++Q+Y VGV + ++++ G V+ QG LS +G+E ++++ +RE Sbjct: 38 GFPL-LLKQLYSVGVLSLAIIVVSGLFIGMVLGLQGYTILSDYGSEAAIGQMIALTLVRE 96 Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 +G ++TA++ AGR+GSA+ AEIG MK E++ ++ MG+D +R +I+PR+WA IS+P+L Sbjct: 97 LGPVVTALLFAGRAGSALTAEIGLMKATEQLSSMEMMGVDPLRRVIAPRLWAGFISVPVL 156 Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAM 329 + + I G +V ++ + F+ S+ + A++ G++K+ +A+ Sbjct: 157 AAVFSVVGIWGGMLVGVEWLGVFEGSFWGNMQSSVSFTADVLNGVVKSLVFGFVCTWIAV 216 Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 +G+ S + T VV S V+ +D Sbjct: 217 YQGYDCVPTSAGISAATTKTVVYSSLAVLGLD 248 >gi|255319835|ref|ZP_05361040.1| toluene tolerance efflux transporter [Acinetobacter radioresistens SK82] gi|262380367|ref|ZP_06073521.1| toluene tolerance efflux transporter [Acinetobacter radioresistens SH164] gi|255303154|gb|EET82366.1| toluene tolerance efflux transporter [Acinetobacter radioresistens SK82] gi|262297813|gb|EEY85728.1| toluene tolerance efflux transporter [Acinetobacter radioresistens SH164] Length = 258 Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 62/198 (31%), Positives = 109/198 (55%), Gaps = 1/198 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I QMY VGV + ++ + G V+ QG L G+E ++++ LRE+ ++ Sbjct: 42 IYQMYRVGVMSLLIITVSGLFIGLVLGLQGYSILVNVGSEAMLGTMVALTLLRELAPVVA 101 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+GSA+ AEIG MK E++ ++ +G+D ++ ++SPR+WA I+SLP+LT++ Sbjct: 102 ALLFAGRAGSALTAEIGLMKATEQLSSMEMIGVDPLKRIVSPRLWAGIVSLPMLTVIFGA 161 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAV 335 I+G +V + + F+S S+ ++ G+IK+ A +A+ +G+A Sbjct: 162 VGILGGKLVGVDFLGVDEGSFWSGMQSSVQFGHDVVNGIIKSTVFALICTWIAVYQGYAC 221 Query: 336 GVHSNSLGKKVTTCVVQS 353 S + T VV S Sbjct: 222 EPTSEGIATSTTRTVVFS 239 >gi|304310283|ref|YP_003809881.1| Toluene tolerance ABC efflux transporter, permease [gamma proteobacterium HdN1] gi|301796016|emb|CBL44220.1| Toluene tolerance ABC efflux transporter, permease [gamma proteobacterium HdN1] Length = 260 Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 118/207 (57%), Gaps = 1/207 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y +GV + ++++ G V+A QG L+QFG+E L+++ LRE+G ++ Sbjct: 43 LVKQIYSIGVLSLVIIVVSGVFIGMVLALQGYHILTQFGSEEALGQLVALSLLRELGPVV 102 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ AGR+GSA+ AEIG MK E++ + +G+D +R +I+PR WA I +P L ++ + Sbjct: 103 AALLFAGRAGSALTAEIGLMKATEQLASFEMIGVDPLRRIIAPRFWAGFICMPTLAVIFS 162 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 +IGA +V K+ + F++ ++ ++ G+IK+ + +A+ +G+ Sbjct: 163 AVGVIGAYLVGVKWLGVYDGSFWANMQNSVEWGEDVVNGVIKSFAFGAVVTWIAVFQGYD 222 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIID 361 S + + T VV S V+ +D Sbjct: 223 CIPTSEGISRATTRTVVFSSLAVLGLD 249 >gi|227358279|ref|ZP_03842620.1| ABC superfamily ATP binding cassette transporter, membrane protein [Proteus mirabilis ATCC 29906] gi|227161615|gb|EEI46652.1| ABC superfamily ATP binding cassette transporter, membrane protein [Proteus mirabilis ATCC 29906] Length = 259 Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 74/222 (33%), Positives = 118/222 (53%), Gaps = 13/222 (5%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 L++Q+Y VGV + ++++ G V+ QG L+ F AE S+ +M L L RE+G + Sbjct: 43 LMKQLYSVGVQSLLIIMVSGLFIGMVLGLQGYLVLTTFSAEA-SLGMMVALSLLRELGPV 101 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGR+GSA+ AEIG MK E+I ++ M +D +R +++PR WA IS+PLL+++ Sbjct: 102 VTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLRRVVAPRFWAGFISMPLLSLIF 161 Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTAT----LANIFTGLIKAPFMACAIGIVA 328 I G +I V WK D F F++ L N F IK+ A + +A Sbjct: 162 VAVGIWGGAIVGVDWKGIDEGF--FWASMQGAVEWQKDLVNCF---IKSVVFAITVTWIA 216 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + G+ S + + T VV S V+ +D + F Sbjct: 217 LFNGYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 258 >gi|91201081|emb|CAJ74139.1| strongly similar to ABC-transporter, permease [Candidatus Kuenenia stuttgartiensis] Length = 260 Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 66/206 (32%), Positives = 111/206 (53%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +I+Q+ ++GV V V++L TG V+A Q + L +FGAE +++ ++E+G ++ Sbjct: 46 IIKQINFIGVKTVLVIVLTGTFTGMVLALQMYYVLIKFGAEARLGPAVAMSLIKELGPVI 105 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A+M+ GR+GSAI AEIG M+I+E++DA+ M L+ + LI P I A +ISLPLL + Sbjct: 106 CALMVTGRAGSAITAEIGIMRISEQVDALDAMALNPYKYLIIPNIIAGVISLPLLNAIFV 165 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 + G V + +F + ++F G K+ I ++ +GF Sbjct: 166 VLGVFGGYAVGVGLMGVSSGTYFGGINDFVAARDVFEGFYKSLSFGVLITWISCYKGFYT 225 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361 G + + K T VV S +++I D Sbjct: 226 GYGAEGVSKATTQSVVISSVVILIWD 251 >gi|311695326|gb|ADP98199.1| ABC-type transport system involved in resistance to organic solvents, permease component [marine bacterium HP15] Length = 260 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 65/213 (30%), Positives = 118/213 (55%), Gaps = 2/213 (0%) Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209 GF L L++Q+Y VGV + +V++ G V+ QG LS +G+E ++++ +R Sbjct: 38 TGFPL-LMKQIYAVGVLSLAIVVVSGLFIGMVLGLQGYTILSDYGSEAAIGQMIALTLVR 96 Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 E+G ++TA++ AGR+GSA+ AEIG MK E++ ++ MG+D +R +I+PR+WA I++P+ Sbjct: 97 ELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSMEMMGVDPLRRVIAPRLWAGFIAMPV 156 Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVA 328 L ++ + I G +V + + F+ S+ ++ G+IK+ +A Sbjct: 157 LAVIFSVVGIWGGMLVGVDWLGVFEGSFWGNMQSSVDFVDDVLNGVIKSVVFGFVCAWIA 216 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + +G+ S + T VV S V+ +D Sbjct: 217 VYQGYDCVPTSAGISSATTKTVVYSSLAVLGLD 249 >gi|197287459|ref|YP_002153331.1| hypothetical protein PMI3656 [Proteus mirabilis HI4320] gi|194684946|emb|CAR47136.1| putative membrane protein [Proteus mirabilis HI4320] Length = 259 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 74/222 (33%), Positives = 118/222 (53%), Gaps = 13/222 (5%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 L++Q+Y VGV + ++++ G V+ QG L+ F AE S+ +M L L RE+G + Sbjct: 43 LMKQLYSVGVQSLLIIMVSGLFIGMVLGLQGYLVLTTFSAEA-SLGMMVALSLLRELGPV 101 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGR+GSA+ AEIG MK E+I ++ M +D +R +++PR WA IS+PLL+++ Sbjct: 102 VTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLRRVVAPRFWAGFISMPLLSLIF 161 Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTAT----LANIFTGLIKAPFMACAIGIVA 328 I G +I V WK D F F++ L N F IK+ A + +A Sbjct: 162 VAVGIWGGAIVGVDWKGIDEGF--FWASMQGAVEWQKDLVNCF---IKSVVFAITVTWIA 216 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + G+ S + + T VV S V+ +D + F Sbjct: 217 LFNGYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 258 >gi|162456584|ref|YP_001618951.1| putative ABC transport system permease protein [Sorangium cellulosum 'So ce 56'] gi|161167166|emb|CAN98471.1| putative ABC transport system permease protein [Sorangium cellulosum 'So ce 56'] Length = 266 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 64/202 (31%), Positives = 107/202 (52%) Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219 M ++G V +V L +G V+ Q ++ L F AE L+++ RE+ + +A+M Sbjct: 55 MDFMGAQSVFIVGLTGVFSGMVVTLQTSYALRAFSAEGRVGGLVAVSLARELAPVFSAIM 114 Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279 + R+GSA+ AE+G+M++ E+IDAI TMG+ V+ L+SPR++A + LPLL IL + Sbjct: 115 VTARAGSAMAAELGNMRVTEQIDAIATMGVSPVQYLLSPRLFAATVMLPLLCILYTSVGM 174 Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339 G+ +V + FF A +I GLIKA + ++ + GF + Sbjct: 175 CGSYLVAVLWLGGDEGAFFQSIRDFALPKDISMGLIKACVFGFIVSSISCRHGFYASGGA 234 Query: 340 NSLGKKVTTCVVQSISIVIIID 361 +G T VV+S V++ + Sbjct: 235 RGVGVATTRAVVESCVTVLVTN 256 >gi|305664733|ref|YP_003861020.1| organic solvents resistance ABC transporter [Maribacter sp. HTCC2170] gi|88707855|gb|EAR00094.1| ABC-type transport system involved in resistance to organic solvents [Maribacter sp. HTCC2170] Length = 264 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 66/221 (29%), Positives = 115/221 (52%), Gaps = 4/221 (1%) Query: 141 EFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSI 200 E Y+FK L+RQ Y +G + +V + F+ G V+ Q L +FGA + Sbjct: 35 EALKPPYEFK----ELLRQCYNMGNRSLVLVGVTGFIIGLVLTLQSRPTLIEFGAVSWMP 90 Query: 201 DLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRI 260 +++ I +REIG ++TA++ AGR S I AE+GSM++ E+IDA+ G + + L+ RI Sbjct: 91 NMVGISIVREIGPVITALICAGRIASGIGAELGSMRVTEQIDAMEVSGTNPFKYLVVTRI 150 Query: 261 WALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320 A + LPLL I + A+ G+++V ++ F ++F+ ++ IK+ F Sbjct: 151 MATTLMLPLLVIFGDLVALYGSALVENLKGNVSFQLYFNTVFDALEFGDLIPATIKSFFF 210 Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 IG+V +G+ + +G T VV + ++ +D Sbjct: 211 GFTIGLVGCYKGYYSKKGTAGVGVAANTAVVLASLLLFFVD 251 >gi|50119256|ref|YP_048423.1| hypothetical protein ECA0296 [Pectobacterium atrosepticum SCRI1043] gi|49609782|emb|CAG73216.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043] Length = 260 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 70/219 (31%), Positives = 118/219 (53%), Gaps = 7/219 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 L++Q+Y VGV + ++I+ G V+ QG L+ + AE S+ +M L L RE+G + Sbjct: 44 LVKQLYSVGVQSLLIIIVSGLFIGMVLGLQGYIILTTYSAEA-SLGMMVALSLLRELGPV 102 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +++PR WA +IS+PLL ++ Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVVAPRFWAGLISMPLLAVIF 162 Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331 I G ++ V WK D F F+S ++ +IK+ A + +A+ Sbjct: 163 VAVGIWGGALVGVDWKGIDSGF--FWSAMQGAVDWRQDVLNCVIKSIVFAITVTWIALFN 220 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+ S + + T VV S V+ +D + F Sbjct: 221 GYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|114776717|ref|ZP_01451760.1| hypothetical protein SPV1_10896 [Mariprofundus ferrooxydans PV-1] gi|114552803|gb|EAU55234.1| hypothetical protein SPV1_10896 [Mariprofundus ferrooxydans PV-1] Length = 266 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 74/257 (28%), Positives = 132/257 (51%), Gaps = 7/257 (2%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172 +G+ ++ I + A +LGL F ++ K F+L Q+ +GV + ++I Sbjct: 17 RLGRHALRGI-EQIGDATMLGL--GALSLFFVRPWQGKHFVL----QLSALGVGSLIIII 69 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 + TG V+A QG + L++FG+E + + +RE+G +L A M+ GR+GS+I AEI Sbjct: 70 ITGAFTGMVLALQGYYTLAKFGSESLLGAGVGMSIIRELGPVLGAFMVIGRAGSSITAEI 129 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 G M++ E+ DA+ M ++ + ++ PRI A I++PLL + + I IV + + Sbjct: 130 GIMRVTEQTDALEMMAINPKQRILLPRIVATTIAVPLLVSIFDVIGIGSGYIVGVELLGV 189 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 + + ST T+ +I+ G +KA IG++ G+ + + + T VV Sbjct: 190 NPGAYMAELVSTVTMHDIYGGWVKAVVFGFMIGMICTYMGYRSEPTTEGVARATTQAVVV 249 Query: 353 SISIVIIIDSLFAIFYF 369 S V+I+D + FY Sbjct: 250 SSVTVLILDYILTSFYL 266 >gi|307129071|ref|YP_003881087.1| putative toluene transporter subunit: membrane protein [Dickeya dadantii 3937] gi|306526600|gb|ADM96530.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Dickeya dadantii 3937] Length = 260 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 70/219 (31%), Positives = 119/219 (54%), Gaps = 7/219 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 L +Q+Y VGV + ++++ G V+ QG L+ + AE S+ +M L L RE+G + Sbjct: 44 LRKQLYSVGVQSLLIIMVSGVFIGMVLGLQGYLVLTTYSAEA-SLGMMVALSLLRELGPV 102 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +++PR WA +IS+PLLT++ Sbjct: 103 VTALLFAGRAGSALTAEIGLMKTTEQLSSMEMMAVDPLRRVVAPRFWAGVISMPLLTVIF 162 Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331 I G ++ V WK D F F+S + ++ +IK+ A + +A+ Sbjct: 163 VAVGIWGGALVGVDWKGIDSGF--FWSAMQNAVEWRKDLLNCVIKSLVFAITVTWIALFN 220 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+ S + + T VV S V+ +D + F Sbjct: 221 GYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|56459515|ref|YP_154796.1| ABC-type transport system involved in resistance to organic solvents, permease [Idiomarina loihiensis L2TR] gi|56178525|gb|AAV81247.1| ABC-type transport system involved in resistance to organic solvents, permease component [Idiomarina loihiensis L2TR] Length = 259 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 63/198 (31%), Positives = 110/198 (55%), Gaps = 1/198 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I+QMY VGV + +VI+ G V+ QG L +GAE ++++ LRE+G ++T Sbjct: 44 IKQMYVVGVLSMLIVIVSGLFIGMVLGLQGYTILVDYGAEQSLGPMVALSLLRELGPVVT 103 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 ++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA ++S+PLL ++ + Sbjct: 104 GLLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVVSMPLLALMFSA 163 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAV 335 I G +V + + F+S S ++ G+IK+ A + +A+ +G+ Sbjct: 164 VGIYGGYLVGSGWLGVDEGAFWSVMQSAVDWQDDLLNGIIKSIVFAFVVTWIALYKGYRS 223 Query: 336 GVHSNSLGKKVTTCVVQS 353 S + T+ VV + Sbjct: 224 VPTSAGISAATTSTVVTA 241 >gi|77166237|ref|YP_344762.1| hypothetical protein Noc_2785 [Nitrosococcus oceani ATCC 19707] gi|254435217|ref|ZP_05048724.1| conserved hypothetical protein [Nitrosococcus oceani AFC27] gi|76884551|gb|ABA59232.1| Protein of unknown function DUF140 [Nitrosococcus oceani ATCC 19707] gi|207088328|gb|EDZ65600.1| conserved hypothetical protein [Nitrosococcus oceani AFC27] Length = 260 Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 115/216 (53%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI Q+Y VGV +P++++ G V+ QG L FGAE ++S+ +RE+G ++ Sbjct: 43 LITQVYSVGVLTLPIIVVSGAFVGMVLGLQGYNTLVDFGAEESLGVIVSLSLVRELGPVV 102 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 +A++ AGR+GSA+ AEIG MK E++ + M +D VR + +PR +A S+PLL + + Sbjct: 103 SALLFAGRAGSALTAEIGLMKATEQLSGMEMMAVDPVRRIAAPRFFAGCFSMPLLAAIFS 162 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFH-STATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 ++G V + F+S+ ST ++ G+IK+ + +A+ EG+ Sbjct: 163 AVGVLGGYFVGVGLLGVDEGAFWSQMQASTDWKEDVLNGVIKSIVFGIVVTWIAVFEGYD 222 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S+ +G+ T VV S V+ +D + F Sbjct: 223 AVPTSDGVGRATTRTVVHSAFAVLALDFVLTALMFG 258 >gi|75907908|ref|YP_322204.1| hypothetical protein Ava_1687 [Anabaena variabilis ATCC 29413] gi|75701633|gb|ABA21309.1| Protein of unknown function DUF140 [Anabaena variabilis ATCC 29413] Length = 263 Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 64/202 (31%), Positives = 106/202 (52%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 QM VG + + +L + GAV Q A + FGA ++++ RE+ +LTA Sbjct: 41 EQMAAVGPDSLFIALLTAVFVGAVFTIQVAREFINFGAGNLVGGVLAVALTRELSPVLTA 100 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 V++AGR GSA AEIG+M++ E+IDA+ + D + L+ PR+ A + LP+LT+L+ + Sbjct: 101 VILAGRVGSAFAAEIGTMRVTEQIDAMLMLKTDPIDYLVIPRLLACFLMLPILTLLSLVT 160 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 I+G I+ Y I VF + + +I + +IKA I I+ G Sbjct: 161 GILGGLIIATNMYGISDTVFLDSARNLLEVWDICSAMIKACCFGVLIAIIGCSWGLTTTG 220 Query: 338 HSNSLGKKVTTCVVQSISIVII 359 + +G+ TT VV ++ I+ + Sbjct: 221 GAKGVGQSTTTAVVTALLIIFV 242 >gi|300113019|ref|YP_003759594.1| hypothetical protein Nwat_0303 [Nitrosococcus watsonii C-113] gi|299538956|gb|ADJ27273.1| protein of unknown function DUF140 [Nitrosococcus watsonii C-113] Length = 260 Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 115/216 (53%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI Q+Y VGV +P++++ G V+ QG L FGAE ++S+ +RE+G ++ Sbjct: 43 LITQVYSVGVLTLPIIVVSGAFVGMVLGLQGYNTLVDFGAEESLGVIVSLSLVRELGPVV 102 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 +A++ AGR+GSA+ AEIG MK E++ + M +D VR + +PR +A S+PLL + + Sbjct: 103 SALLFAGRAGSALTAEIGLMKATEQLSGMEMMAVDPVRRIAAPRFFAGCFSMPLLAAIFS 162 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFH-STATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 ++G V + F+S+ ST ++ G+IK+ + +A+ EG+ Sbjct: 163 AVGVLGGYFVGVGLLGVDEGAFWSQMQASTDWEEDVLNGVIKSIVFGIVVTWIAVFEGYD 222 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S+ +G+ T VV S V+ +D + F Sbjct: 223 TVPTSDGVGRATTRTVVHSAFAVLALDFVLTALMFG 258 >gi|288962766|ref|YP_003453060.1| ABC transport system permease protein [Azospirillum sp. B510] gi|288915032|dbj|BAI76516.1| ABC transport system permease protein [Azospirillum sp. B510] Length = 258 Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 65/217 (29%), Positives = 119/217 (54%), Gaps = 4/217 (1%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE--IFSIDLMSILQLREIGV 213 ++RQM +G +PVV L + TG V+A Q S+F AE I ++ ++SI RE+G Sbjct: 42 ILRQMIDIGYYSLPVVGLTALFTGMVLALQSYSGFSRFQAEGAIATVVVLSIT--RELGP 99 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 +L +M+AGR G+A+ AEIG+M++ E+IDA+ T+ + + L++PR+ A + +PLL ++ Sbjct: 100 VLAGLMVAGRIGAAMAAEIGTMRVTEQIDALSTLSTNPYKYLVAPRLIAGLTMVPLLVVV 159 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 A+ + G +V D A + +R ++ +GL+KA I ++ G+ Sbjct: 160 ADIIGVFGGFLVGVYRLDFNAASYINRTWEFLQPVDVISGLVKAAIFGFLIALMGCYHGY 219 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +G T VV + ++++ + L +F+ Sbjct: 220 HSKGGAQGVGAATTNAVVSASIMILVWNYLITGLFFS 256 >gi|16330753|ref|NP_441481.1| hypothetical protein slr1344 [Synechocystis sp. PCC 6803] gi|1653246|dbj|BAA18161.1| slr1344 [Synechocystis sp. PCC 6803] Length = 283 Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 62/212 (29%), Positives = 111/212 (52%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q+ +VG + +P+ ++ + V G + Q A + FGA ++ + RE+ ++TA Sbjct: 60 QQLMFVGPASLPITLITAAVIGMIFTIQVAREFLAFGAGSAVGGILMLALGRELCPIMTA 119 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 V++AGR GSA AEIG+M++ E+IDA+ + + V L+ PR+ A I +P L++LA + Sbjct: 120 VVVAGRVGSAFAAEIGTMRVTEQIDALYMLNTNPVEYLVIPRLLACCIMVPTLSVLALVT 179 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 ++G +++ Y I VFF + T +IF G +K I I+ G Sbjct: 180 GMMGGAVISSNVYGIANQVFFESIQTFVTPWDIFCGPVKGIVFGVLIAIIGCNWGLTTRG 239 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+ T VV S+ + + + L + F Sbjct: 240 GAKGVGESTTAAVVTSLLAIFVSNFLMSWIMF 271 >gi|189423561|ref|YP_001950738.1| hypothetical protein Glov_0490 [Geobacter lovleyi SZ] gi|189419820|gb|ACD94218.1| protein of unknown function DUF140 [Geobacter lovleyi SZ] Length = 257 Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 62/199 (31%), Positives = 112/199 (56%), Gaps = 1/199 (0%) Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 +G S + + +L TG V+A Q QL F A + ++++ ++E+G +L A+M+AG Sbjct: 49 LGFSSLFICVLTGLFTGMVMALQALIQLKPFAATSYVGGMVAVTMIKELGPVLAALMVAG 108 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 R GSAI AE+G+M + E++DA+R G D ++ L++PR+ A++++LPLLTI+ + +++G Sbjct: 109 RVGSAITAELGTMVVTEQVDAMRVEGTDIIQRLVTPRLKAMLLALPLLTIITDAVSMLGG 168 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 + I Y I ++ S F + G+ K A I +++ + G G + + Sbjct: 169 YL-IASGYSISPVMYLSTFTQFMVPLDYLEGVTKPLVFAFLITMISCQTGLNTGGGAEGV 227 Query: 343 GKKVTTCVVQSISIVIIID 361 G VV S +V++ D Sbjct: 228 GAAAKRAVVLSSVLVLMCD 246 >gi|271498870|ref|YP_003331895.1| hypothetical protein Dd586_0293 [Dickeya dadantii Ech586] gi|270342425|gb|ACZ75190.1| protein of unknown function DUF140 [Dickeya dadantii Ech586] Length = 260 Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 70/219 (31%), Positives = 119/219 (54%), Gaps = 7/219 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 L +Q+Y VGV + ++++ G V+ QG L+ + AE S+ +M L L RE+G + Sbjct: 44 LRKQLYSVGVQSLLIIMVSGVFIGMVLGLQGYLVLTTYSAEA-SLGMMVALSLLRELGPV 102 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +++PR WA +IS+PLLT++ Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVVAPRFWAGVISMPLLTVIF 162 Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331 I G ++ V WK D F F+S + ++ +IK+ A + +A+ Sbjct: 163 VAVGIWGGALVGVDWKGIDSGF--FWSAMQNAVEWQKDLLNCVIKSLVFAITVTWIALFN 220 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+ S + + T VV S V+ +D + F Sbjct: 221 GYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|253686687|ref|YP_003015877.1| hypothetical protein PC1_0282 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753265|gb|ACT11341.1| protein of unknown function DUF140 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 260 Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 69/219 (31%), Positives = 118/219 (53%), Gaps = 7/219 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 L++Q+Y VGV + ++++ G V+ QG L+ + AE S+ +M L L RE+G + Sbjct: 44 LVKQLYSVGVQSLLIIMVSGLFIGMVLGLQGYIVLTTYSAEA-SLGMMVALSLLRELGPV 102 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +++PR WA +IS+PLL ++ Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVVAPRFWAGLISMPLLAVIF 162 Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331 I G ++ V WK D F F+S ++ +IK+ A + +A+ Sbjct: 163 VAVGIWGGALVGVDWKGIDSGF--FWSAMQGAVDWRQDVLNCVIKSVVFAITVTWIALFN 220 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+ S + + T VV S V+ +D + F Sbjct: 221 GYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|227326638|ref|ZP_03830662.1| hypothetical protein PcarcW_04664 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 260 Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 69/219 (31%), Positives = 118/219 (53%), Gaps = 7/219 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 L++Q+Y VGV + ++++ G V+ QG L+ + AE S+ +M L L RE+G + Sbjct: 44 LVKQLYSVGVQSLLIIMVSGLFIGMVLGLQGYLILTTYSAEA-SLGMMVALSLLRELGPV 102 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +++PR WA +IS+PLL ++ Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVVAPRFWAGLISMPLLAVIF 162 Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331 I G ++ V WK D F F+S ++ +IK+ A + +A+ Sbjct: 163 VAVGIWGGALVGVDWKGIDSGF--FWSAMQGAVDWRQDVLNCVIKSIVFAITVTWIALFN 220 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+ S + + T VV S V+ +D + F Sbjct: 221 GYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|172039649|ref|YP_001806150.1| hypothetical protein cce_4736 [Cyanothece sp. ATCC 51142] gi|171701103|gb|ACB54084.1| DUF140-containing protein [Cyanothece sp. ATCC 51142] Length = 263 Score = 99.4 bits (246), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 63/205 (30%), Positives = 107/205 (52%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + QM VG V + ++ + G V Q A + FGA ++++ RE+ +LT Sbjct: 43 LEQMSVVGPESVTIALITAGFVGMVFTIQVAREFISFGAASTVGGVLALALTRELAPVLT 102 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV++AGR GSA AEIG+M++ E+IDA+ + D + L+ PR+ A + LP+L IL+ Sbjct: 103 AVVVAGRVGSAFAAEIGTMRVTEQIDALYMLKTDPIDYLVVPRVLACCLMLPVLNILSLL 162 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + + G ++ YDI VF + + L ++ T +IK+ I ++ G Sbjct: 163 TGMTGGLLIANGLYDISPYVFLTSVRNFLELWDLVTSMIKSVAFGGLIAVIGCSWGLTTT 222 Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361 + +G+ TT VV S+ V +I+ Sbjct: 223 GGAKGVGQSTTTAVVTSLLAVFVIN 247 >gi|294056022|ref|YP_003549680.1| protein of unknown function DUF140 [Coraliomargarita akajimensis DSM 45221] gi|293615355|gb|ADE55510.1| protein of unknown function DUF140 [Coraliomargarita akajimensis DSM 45221] Length = 258 Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 51/162 (31%), Positives = 96/162 (59%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+ ++ +GV VP+V+++ G V+ Q + L + GAE D + + +RE+G +L Sbjct: 40 LLSAIFEIGVRCVPIVLVVGLFAGLVMGLQLYYTLVRLGAEAALGDAIGLSLVRELGPVL 99 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA+M+ G++GSA+ +E+G + +E+IDA++TMG++ L+ PR+WA +I P+LT L + Sbjct: 100 TALMVVGQAGSALASELGIQRNDEQIDALQTMGIEPRGYLVGPRLWAALICFPMLTALFD 159 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 I G + + V+++ + + +++ G IKA Sbjct: 160 LIGIYGGYLTGSVLLHVDSGVYWTHVYKSVQWDDVWGGFIKA 201 >gi|162146610|ref|YP_001601069.1| hypothetical protein GDI_0788 [Gluconacetobacter diazotrophicus PAl 5] gi|161785185|emb|CAP54731.1| putative membrane protein [Gluconacetobacter diazotrophicus PAl 5] Length = 373 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 72/221 (32%), Positives = 118/221 (53%), Gaps = 3/221 (1%) Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 L+S IR G S + +V +++F+ GA++A GA QL +F A+I+ L+ I +RE+ Sbjct: 156 LMSNIRD---AGPSALLIVSVVNFLVGAILAFVGAVQLRKFAADIYVASLVGIAMVREMS 212 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 ++TA+++AGR+G A A I +M+ NEEIDA+ G+ LI P I L+ ++P L + Sbjct: 213 AVMTAIIMAGRTGGAYAARIATMQGNEEIDALTVFGIPVSSYLILPSILGLVATMPFLYL 272 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 ++G V + A +F + + L G IK+ F A IG+ + + G Sbjct: 273 YGCLIGMLGGFTVAISMLAVTGAGYFHQTINAVGLNQFEFGFIKSIFFAILIGLTSCRIG 332 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 G + +G T VV I VI +D++FA+ +GI Sbjct: 333 LRSGRSAADVGVAATRAVVVGIVGVITLDAIFAVIATTLGI 373 >gi|114330858|ref|YP_747080.1| hypothetical protein Neut_0852 [Nitrosomonas eutropha C91] gi|114307872|gb|ABI59115.1| protein of unknown function DUF140 [Nitrosomonas eutropha C91] Length = 265 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/213 (28%), Positives = 113/213 (53%), Gaps = 1/213 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 R++YY GV + ++++ G V+ QG L +FG+E L+++ +RE+G ++ A Sbjct: 49 REIYYAGVMSLIIILVSGLFVGMVLGLQGYETLQKFGSESAVGTLVALSLVRELGPVIAA 108 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ A R+GSA+ AEIG MK E++ A+ M +D + +++PR W + S+PLL + + Sbjct: 109 LLFASRAGSAMTAEIGLMKATEQLAAMGMMAVDPIARIVAPRFWGGVFSMPLLAAMFSVM 168 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + G +V + + F+S+ S+ +I G+IK+ F + +A+ EGF Sbjct: 169 GVFGGYLVTVIFIGVDEGSFWSQMQSSVDFRYDIVNGVIKSCFFGVVVTAIAVFEGFDAP 228 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + + T VV S ++ +D + F F Sbjct: 229 PTAEGVSGATTRTVVTSALAILGLDFVLTAFMF 261 >gi|255034005|ref|YP_003084626.1| hypothetical protein Dfer_0190 [Dyadobacter fermentans DSM 18053] gi|254946761|gb|ACT91461.1| protein of unknown function DUF140 [Dyadobacter fermentans DSM 18053] Length = 262 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 110/204 (53%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +++Q Y +G + ++ L F+TG V +Q LS+FGA + L++I +R + L+ Sbjct: 45 IVKQCYAIGNKSLLLISLTGFITGMVFTKQSRPSLSEFGATSWLPSLVAIAIVRALAPLV 104 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AG+ GS+I AE+GSM++ E+IDA+ ++ + L+ R+ A I++P+L Sbjct: 105 TALISAGKIGSSIGAELGSMRVTEQIDAMEVSAVNPFKFLVVTRVVACTIAIPVLMFYCA 164 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 +++GA + + F FF T +I+T + KA IGIV +G+ Sbjct: 165 LVSLLGAYLNVTLNEGTSFIAFFENAFEQITFLDIWTSVAKAIAYGFTIGIVGSYQGYNA 224 Query: 336 GVHSNSLGKKVTTCVVQSISIVII 359 + +GK + VV S+ ++ I Sbjct: 225 SKGTEGVGKAANSAVVTSMFLIFI 248 >gi|89255923|ref|YP_513285.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica LVS] gi|115314405|ref|YP_763128.1| toluene ABC transporter ATP-binding/membrane protein [Francisella tularensis subsp. holarctica OSU18] gi|167009174|ref|ZP_02274105.1| toluene ABC superfamily ATP binding cassette transporter, membrane protein [Francisella tularensis subsp. holarctica FSC200] gi|169656537|ref|YP_001427977.2| toluene tolerance protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|254367281|ref|ZP_04983308.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica 257] gi|290953704|ref|ZP_06558325.1| putative ABC transport system permease protein [Francisella tularensis subsp. holarctica URFT1] gi|295312939|ref|ZP_06803658.1| putative ABC transport system permease protein [Francisella tularensis subsp. holarctica URFT1] gi|89143754|emb|CAJ78956.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica LVS] gi|115129304|gb|ABI82491.1| toluene ABC superfamily ATP binding cassette transporter, membrane protein [Francisella tularensis subsp. holarctica OSU18] gi|134253098|gb|EBA52192.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica 257] gi|164551605|gb|ABU61021.2| toluene tolerance protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 254 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 113/195 (57%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I Q+ VGV+ + +++ G V++ QG + LS+FGA ++++ LRE+G ++T Sbjct: 39 IIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGAHSLLGVMVALSVLRELGPVVT 98 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+ S+I +EIG MK ++I++++ M ++ + ++S R WA +IS P+L ++ Sbjct: 99 AMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFILSTRFWACMISGPILALIFAS 158 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 AI+ + I+ I + F+S S+ T ++I G+IK+ A +A+ +G+ Sbjct: 159 VAILASFILAEAALGISYGEFWSNIQSSVTASDISNGIIKSIVFAFITAWIALYQGYYCI 218 Query: 337 VHSNSLGKKVTTCVV 351 SN + K T VV Sbjct: 219 PDSNGIAKATTKTVV 233 >gi|158521034|ref|YP_001528904.1| hypothetical protein Dole_1017 [Desulfococcus oleovorans Hxd3] gi|158509860|gb|ABW66827.1| protein of unknown function DUF140 [Desulfococcus oleovorans Hxd3] Length = 385 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 59/178 (33%), Positives = 102/178 (57%) Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 QL++ G +I+ +++ + EIG ++TA+++AGR+GSA AEIG+MKI+EE+DA+ +MG Sbjct: 202 QLTKLGGDIYIPAMITFAMVAEIGPMMTAIVVAGRTGSAYAAEIGTMKISEEVDALISMG 261 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 D L PRI AL++ LP+LT+ + A++G +V ++ + + Sbjct: 262 FDPTLFLAIPRITALVVVLPILTVCSVIFALLGGLVVCVTLLNLQMGPYLEGVSDALFID 321 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 ++ L K+ A I ++ GF V + S+G T+ VV I +I+ DS+ A+ Sbjct: 322 DVLWALAKSGIFALLIAVIGCLRGFQVRGGAASVGGAATSAVVTGIFFIILADSVVAL 379 >gi|17231507|ref|NP_488055.1| hypothetical protein alr4015 [Nostoc sp. PCC 7120] gi|17133150|dbj|BAB75714.1| alr4015 [Nostoc sp. PCC 7120] Length = 263 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 63/202 (31%), Positives = 106/202 (52%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 QM VG + + +L + GAV Q A + FGA ++++ RE+ +LTA Sbjct: 41 EQMAAVGPDSLFIALLTAVFVGAVFTIQVAREFINFGAGNLVGGVLAVALTRELSPVLTA 100 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 V++AGR GSA AEIG+M++ E+IDA+ + D + L+ PR+ A + LP+LT+L+ + Sbjct: 101 VILAGRVGSAFAAEIGTMRVTEQIDAMLMLKTDPIDYLVIPRLLACFLMLPILTLLSLVT 160 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 ++G I+ Y I VF + + +I + +IKA I I+ G Sbjct: 161 GMLGGLIIATNMYGISDTVFLDSARNLLEIWDICSAMIKACCFGVLIAIIGCSWGLTTTG 220 Query: 338 HSNSLGKKVTTCVVQSISIVII 359 + +G+ TT VV ++ I+ + Sbjct: 221 GAKGVGQSTTTAVVTALLIIFV 242 >gi|37521379|ref|NP_924756.1| hypothetical protein glr1810 [Gloeobacter violaceus PCC 7421] gi|35212376|dbj|BAC89751.1| glr1810 [Gloeobacter violaceus PCC 7421] Length = 255 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/213 (28%), Positives = 109/213 (51%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + Q+ VG V V ++ + G V Q A + FGA +++I RE+ +LT Sbjct: 32 VDQLSVVGTESVLVAVITAITIGMVFTIQVAREFISFGASSAIGGVLAIALTRELAPVLT 91 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV+IAGR GSA AE+G+M++ E+IDA+ + D + L++PR+ A + LP+LTI+A+ Sbjct: 92 AVIIAGRVGSAFAAEVGTMRVTEQIDALEVLRTDPIDYLVTPRVIACAVMLPVLTIVADV 151 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + + G + + Y I ++ + ++ +GLIKA I ++ G Sbjct: 152 TGLAGGLFITTQLYGISATLYLDSARNLLESWDMISGLIKAGIFGVLIALIGTNWGLTTT 211 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G T VV ++ + I++ + + F Sbjct: 212 GGARGVGNSTTQSVVTALLTIFIVNFILSALMF 244 >gi|209543397|ref|YP_002275626.1| hypothetical protein Gdia_1228 [Gluconacetobacter diazotrophicus PAl 5] gi|209531074|gb|ACI51011.1| protein of unknown function DUF140 [Gluconacetobacter diazotrophicus PAl 5] Length = 383 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 72/221 (32%), Positives = 118/221 (53%), Gaps = 3/221 (1%) Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 L+S IR G S + +V +++F+ GA++A GA QL +F A+I+ L+ I +RE+ Sbjct: 166 LMSNIRD---AGPSALLIVSVVNFLVGAILAFVGAVQLRKFAADIYVASLVGIAMVREMS 222 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 ++TA+++AGR+G A A I +M+ NEEIDA+ G+ LI P I L+ ++P L + Sbjct: 223 AVMTAIIMAGRTGGAYAARIATMQGNEEIDALTVFGIPVSSYLILPSILGLVATMPFLYL 282 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 ++G V + A +F + + L G IK+ F A IG+ + + G Sbjct: 283 YGCLIGMLGGFTVAISMLAVTGAGYFHQTINAVGLNQFEFGFIKSIFFAILIGLTSCRIG 342 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 G + +G T VV I VI +D++FA+ +GI Sbjct: 343 LRSGRSAADVGVAATRAVVVGIVGVITLDAIFAVIATTLGI 383 >gi|120555619|ref|YP_959970.1| hypothetical protein Maqu_2708 [Marinobacter aquaeolei VT8] gi|120325468|gb|ABM19783.1| protein of unknown function DUF140 [Marinobacter aquaeolei VT8] Length = 260 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 118/213 (55%), Gaps = 2/213 (0%) Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209 GF L L++Q+Y VGV + +V++ G V+ QG LS +G+E ++++ +R Sbjct: 38 TGFPL-LVKQLYAVGVLSLAIVVVSGLFIGMVLGLQGYTILSDYGSESAIGQMIALTLVR 96 Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 E+G ++TA++ AGR+GSA+ AEIG MK E++ ++ MG+D +R +++PR+WA +++P+ Sbjct: 97 ELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSMEMMGVDPLRRVVAPRLWAGFLAMPV 156 Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVA 328 L ++ + I G +V ++ + F+ S+ ++ G IK+ +A Sbjct: 157 LAMIFSVVGIWGGMLVGVEWLGVFEGSFWGNMQSSVDFVDDVLNGFIKSVVFGFVCAWIA 216 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + +G+ S + T VV S V+ +D Sbjct: 217 VYQGYDCVPTSAGISSATTKTVVYSSLAVLGLD 249 >gi|302328064|gb|ADL27265.1| putative ABC transporter, permease protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 364 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 84/318 (26%), Positives = 146/318 (45%), Gaps = 22/318 (6%) Query: 57 LIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116 L+ EK K+ L+ I+Q + RK + +KPQR N+ + G Sbjct: 63 LLAELSEKTGNKLVLEHFPPEIKQHLQNL----RKMVPPEKPQRE--TNNILEMMGGAGF 116 Query: 117 KIVKFINDSCSQAHILGLVISN-----TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171 ++K + + +L L+ + G F F G + +QM+ G + + Sbjct: 117 SLLKEVFE------VLVLLFTAIYWTIVGPFDKGKIHFGG----ITKQMFKSGSEAMGIC 166 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 L + +A Q + L+ G + + L EIG LLT +++AGRSGSA+ AE Sbjct: 167 FLFVGLICLTMALQSSVMLNAVGGGSYLASGLGFLIFAEIGPLLTTIILAGRSGSAMAAE 226 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 I +M + EE+ A+++M + V+ L+ PR AL I+ P+L+ A+ ++ + + D Sbjct: 227 IANMSVCEEVKALKSMAIPPVQYLVVPRFIALSITTPILSFSASIVGSFAGFLIAYFFCD 286 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 I F+ + IKA + ++A +G + ++GK T+ VV Sbjct: 287 ISFSNYMMGLRDGIDPMTFLKSTIKALVFGWIVTLIACNKGLNAHGGAEAVGKATTSSVV 346 Query: 352 QSISIVIIIDSLFA-IFY 368 +I ++I D+LFA IFY Sbjct: 347 AAICTIVISDTLFAFIFY 364 >gi|194324165|ref|ZP_03057939.1| toluene tolerance protein Ttg2B [Francisella tularensis subsp. novicida FTE] gi|194321612|gb|EDX19096.1| toluene tolerance protein Ttg2B [Francisella tularensis subsp. novicida FTE] Length = 222 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 112/195 (57%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I Q+ VGV+ + +++ G V++ QG + LS+FGA ++++ LRE+G ++T Sbjct: 7 IIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGAHSLLGVMVALSVLRELGPVVT 66 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+ S+I +EIG MK ++I++++ M ++ + ++S R WA +IS P+L ++ Sbjct: 67 AMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFILSTRFWACMISGPILALIFAS 126 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 AI+ I+ I + F+S S+ T ++I G+IK+ A +A+ +G+ Sbjct: 127 VAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGIIKSIVFAFITAWIALYQGYYCI 186 Query: 337 VHSNSLGKKVTTCVV 351 SN + K T VV Sbjct: 187 PDSNGIAKATTKTVV 201 >gi|328675485|gb|AEB28160.1| ABC-type transport system permease protein [Francisella cf. novicida 3523] Length = 222 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 112/195 (57%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I Q+ VGV+ + +++ G V++ QG + LS+FGA ++++ LRE+G ++T Sbjct: 7 IIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGAHSLLGVMVALSVLRELGPVVT 66 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+ S+I +EIG MK ++I++++ M ++ + ++S R WA +IS P+L ++ Sbjct: 67 AMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFILSTRFWACMISGPILALIFAS 126 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 AI+ I+ I + F+S S+ T ++I G+IK+ A +A+ +G+ Sbjct: 127 VAILAGFILAEATLGISYGEFWSNIQSSVTASDISNGIIKSIVFAFITAWIALYQGYYCI 186 Query: 337 VHSNSLGKKVTTCVV 351 SN + K T VV Sbjct: 187 PDSNGIAKATTKTVV 201 >gi|227112741|ref|ZP_03826397.1| hypothetical protein PcarbP_07254 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 260 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 69/219 (31%), Positives = 118/219 (53%), Gaps = 7/219 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 L++Q+Y VGV + ++++ G V+ QG L+ + AE S+ +M L L RE+G + Sbjct: 44 LVKQLYSVGVQSLLIIMVSGLFIGMVLGLQGYIILTTYSAEA-SLGMMVALSLLRELGPV 102 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +++PR WA +IS+PLL ++ Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVVAPRFWAGLISMPLLAVIF 162 Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331 I G ++ V WK D F F+S ++ +IK+ A + +A+ Sbjct: 163 VAVGIWGGALVGVDWKGIDSGF--FWSAMQGAVDWRQDVLNCVIKSIVFAITVTWIALFN 220 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+ S + + T VV S V+ +D + F Sbjct: 221 GYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|261416607|ref|YP_003250290.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373063|gb|ACX75808.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 354 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 84/318 (26%), Positives = 146/318 (45%), Gaps = 22/318 (6%) Query: 57 LIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116 L+ EK K+ L+ I+Q + RK + +KPQR N+ + G Sbjct: 53 LLAELSEKTGNKLVLEHFPPEIKQHLQNL----RKMVPPEKPQRE--TNNILEMMGGAGF 106 Query: 117 KIVKFINDSCSQAHILGLVISN-----TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171 ++K + + +L L+ + G F F G + +QM+ G + + Sbjct: 107 SLLKEVFE------VLVLLFTAIYWTIVGPFDKGKIHFGG----ITKQMFKSGSEAMGIC 156 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 L + +A Q + L+ G + + L EIG LLT +++AGRSGSA+ AE Sbjct: 157 FLFVGLICLTMALQSSVMLNAVGGGSYLASGLGFLIFAEIGPLLTTIILAGRSGSAMAAE 216 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 I +M + EE+ A+++M + V+ L+ PR AL I+ P+L+ A+ ++ + + D Sbjct: 217 IANMSVCEEVKALKSMAIPPVQYLVVPRFIALSITTPILSFSASIVGSFAGFLIAYFFCD 276 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 I F+ + IKA + ++A +G + ++GK T+ VV Sbjct: 277 ISFSNYMMGLRDGIDPMTFLKSTIKALVFGWIVTLIACNKGLNAHGGAEAVGKATTSSVV 336 Query: 352 QSISIVIIIDSLFA-IFY 368 +I ++I D+LFA IFY Sbjct: 337 AAICTIVISDTLFAFIFY 354 >gi|118496937|ref|YP_897987.1| ABC-type transport system permease protein [Francisella tularensis subsp. novicida U112] gi|254372307|ref|ZP_04987798.1| hypothetical protein FTCG_01374 [Francisella tularensis subsp. novicida GA99-3549] gi|118422843|gb|ABK89233.1| ABC-type transport system permease protein [Francisella novicida U112] gi|151570036|gb|EDN35690.1| hypothetical protein FTCG_01374 [Francisella novicida GA99-3549] gi|328676409|gb|AEB27279.1| ABC-type transport system involved in resistance to organic solvents, permease component [Francisella cf. novicida Fx1] Length = 254 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 112/195 (57%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I Q+ VGV+ + +++ G V++ QG + LS+FGA ++++ LRE+G ++T Sbjct: 39 IIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGAHSLLGVMVALSVLRELGPVVT 98 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+ S+I +EIG MK ++I++++ M ++ + ++S R WA +IS P+L ++ Sbjct: 99 AMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFILSTRFWACMISGPILALIFAS 158 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 AI+ I+ I + F+S S+ T ++I G+IK+ A +A+ +G+ Sbjct: 159 VAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGIIKSIVFAFITAWIALYQGYYCI 218 Query: 337 VHSNSLGKKVTTCVV 351 SN + K T VV Sbjct: 219 PDSNGIAKATTKTVV 233 >gi|121998898|ref|YP_001003685.1| hypothetical protein Hhal_2119 [Halorhodospira halophila SL1] gi|121590303|gb|ABM62883.1| protein of unknown function DUF140 [Halorhodospira halophila SL1] Length = 258 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/215 (28%), Positives = 119/215 (55%), Gaps = 1/215 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI Q+Y VGV + ++++ + G V+ QG + L+ FGA ++++ +RE+G ++ Sbjct: 43 LIEQVYAVGVLSLVIILVSALFVGMVLGLQGYYTLADFGATEAVGTMVALSLVRELGPVV 102 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GS++ AE+G MK E++ ++ M +D R +++PR +A ++++PLL + + Sbjct: 103 TALLFAGRAGSSLTAEVGLMKATEQLSSMEMMAVDPERRILAPRFFAAVLAVPLLAAVFS 162 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 + G +V I F+S + T+ +I G+IK+ +G +A+ +G+ Sbjct: 163 AVGVFGGYLVAVGMVGIDSGAFWSNMQNAVTIQDDILNGVIKSVVFGFLVGWIALHKGYM 222 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 S+ + + T VV + V+ +D L F Sbjct: 223 AEPTSSGVSRATTLGVVHASLAVLGLDFLLTALMF 257 >gi|254368757|ref|ZP_04984770.1| ABC-type transport system permease protein [Francisella tularensis subsp. holarctica FSC022] gi|157121678|gb|EDO65848.1| ABC-type transport system permease protein [Francisella tularensis subsp. holarctica FSC022] Length = 254 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 112/195 (57%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I Q+ VGV+ + +++ G V++ QG + LS+FGA ++++ LRE+G ++T Sbjct: 39 IIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGAHSLLGVMVALSVLRELGPVVT 98 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+ S+I +EIG MK ++I++++ M ++ + ++S R WA +IS P+L ++ Sbjct: 99 AMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFILSTRFWACMISGPILALIFAS 158 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 AI+ I+ I + F+S S+ T ++I G+IK+ A +A+ +G+ Sbjct: 159 VAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGIIKSIVFAFITAWIALYQGYYCI 218 Query: 337 VHSNSLGKKVTTCVV 351 SN + K T VV Sbjct: 219 PDSNGIAKATTKTVV 233 >gi|254373781|ref|ZP_04989264.1| hypothetical protein FTDG_01565 [Francisella novicida GA99-3548] gi|151571502|gb|EDN37156.1| hypothetical protein FTDG_01565 [Francisella novicida GA99-3548] Length = 254 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 112/195 (57%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I Q+ VGV+ + +++ G V++ QG + LS+FGA ++++ LRE+G ++T Sbjct: 39 IIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGAHSLLGVMVALSVLRELGPVVT 98 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+ S+I +EIG MK ++I++++ M ++ + ++S R WA +IS P+L ++ Sbjct: 99 AMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFILSTRFWACMISGPILALIFAS 158 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 AI+ I+ I + F+S S+ T ++I G+IK+ A +A+ +G+ Sbjct: 159 VAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGIIKSIVFAFITAWIALYQGYYCI 218 Query: 337 VHSNSLGKKVTTCVV 351 SN + K T VV Sbjct: 219 PDSNGIAKATTKTVV 233 >gi|261819643|ref|YP_003257749.1| hypothetical protein Pecwa_0289 [Pectobacterium wasabiae WPP163] gi|261603656|gb|ACX86142.1| protein of unknown function DUF140 [Pectobacterium wasabiae WPP163] Length = 260 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 69/219 (31%), Positives = 118/219 (53%), Gaps = 7/219 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 L++Q+Y VGV + ++++ G V+ QG L+ + AE S+ +M L L RE+G + Sbjct: 44 LVKQLYSVGVQSLLIIMVSGLFIGMVLGLQGYIILTTYSAEA-SLGMMVALSLLRELGPV 102 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +++PR WA +IS+PLL ++ Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVVAPRFWAGLISMPLLAVIF 162 Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331 I G ++ V WK D F F+S ++ +IK+ A + +A+ Sbjct: 163 VAVGIWGGALVGVDWKGIDSGF--FWSAMQGAVDWRQDVLNCVIKSIVFAITVTWIALFN 220 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+ S + + T VV S V+ +D + F Sbjct: 221 GYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|254489694|ref|ZP_05102890.1| conserved hypothetical protein [Methylophaga thiooxidans DMS010] gi|224465103|gb|EEF81356.1| conserved hypothetical protein [Methylophaga thiooxydans DMS010] Length = 260 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 115/215 (53%), Gaps = 1/215 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 ++Q++ VGV + ++++ G V+ QG L FGAE L+S+ +RE+G +++ Sbjct: 44 VQQLFSVGVLSILIILISGLFVGMVLGLQGYNTLVDFGAEESLGVLVSLSLVRELGPVVS 103 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+GSA+ AEIG MK E++ + M +D +R +I+PR A II++PLL + + Sbjct: 104 ALLFAGRAGSALTAEIGLMKSTEQLSGMEMMAVDPIRRIIAPRFLAGIIAMPLLAAIFSA 163 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I+G +V + F+S+ + L +I G+IK+ + +A+ EG Sbjct: 164 VGILGGFLVGHGLLGVDDGAFWSQMQAKTDLYDDILNGVIKSVVFGFVVTWIALFEGHDA 223 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S +G+ T VV S ++ +D + F Sbjct: 224 TPTSEGVGRATTRTVVHSAFAILGLDFVLTALMFG 258 >gi|268590740|ref|ZP_06124961.1| toluene tolerance ABC efflux transporter, permease [Providencia rettgeri DSM 1131] gi|291313512|gb|EFE53965.1| toluene tolerance ABC efflux transporter, permease [Providencia rettgeri DSM 1131] Length = 260 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 70/219 (31%), Positives = 120/219 (54%), Gaps = 7/219 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 L++Q+Y +GV + ++ + G V+ QG L+ F AE S+ +M L L RE+G + Sbjct: 44 LMKQLYAIGVQSLLIIAVSGLFIGMVLGLQGYLVLTTFSAEA-SLGMMVALSLLRELGPV 102 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGR+GSA+ AEIG MK E+I ++ M +D +R +I+PR WA IS+PLL+++ Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLRRVIAPRFWAGFISMPLLSLIF 162 Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKE 331 I+G ++ V WK D F F++ S+ ++ +IK+ A + +A+ Sbjct: 163 VAVGILGGALVGVDWKGIDEGF--FWASMQSSVDWRLDLVNCVIKSLVFAITVTWIALFN 220 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+ S + + T VV + V+ +D + F Sbjct: 221 GYDAIPTSEGISQATTRTVVHASLSVLGLDFVLTALMFG 259 >gi|218961384|ref|YP_001741159.1| hypothetical protein CLOAM1090 [Candidatus Cloacamonas acidaminovorans] gi|167730041|emb|CAO80953.1| conserved hypothetical protein; putative membrane protein [Candidatus Cloacamonas acidaminovorans] Length = 263 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 67/227 (29%), Positives = 120/227 (52%), Gaps = 12/227 (5%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL- 206 +++ FL+ R +G + +++L + TG V A Q +Q + ++L+S+L Sbjct: 43 RYQEFLIQFKR----IGFDSLFLILLTAAFTGLVTALQAVYQSKGY----VPVNLLSVLI 94 Query: 207 ---QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263 + E+ +LTA+++ G+ G++I AEIG+M+++E+IDA+ +M +D L PRI A Sbjct: 95 GKSTMIELAPVLTALVLTGKVGASIAAEIGTMRVSEQIDALESMNIDPYEFLYMPRILAG 154 Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323 +++ PL+T+ AN II A W Y I + FF+ S ++++ GL K+ Sbjct: 155 VLAFPLVTVFANAVGIICAWYFSWLRYGIHYYTFFNNMRSYFIPSDLWGGLAKSFVFGFI 214 Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 I A G + +GK T+ VV S ++++D + A F F Sbjct: 215 ITSFACYHGDRCFGGAEGVGKATTSTVVYSSVAILVMDFIVAWFLFG 261 >gi|146302050|ref|YP_001196641.1| hypothetical protein Fjoh_4314 [Flavobacterium johnsoniae UW101] gi|146156468|gb|ABQ07322.1| protein of unknown function DUF140 [Flavobacterium johnsoniae UW101] Length = 252 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 65/217 (29%), Positives = 112/217 (51%), Gaps = 4/217 (1%) Query: 145 SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204 Y+ K FL +Q Y +G +P+V + F+ G V+ Q L FGAE + +++ Sbjct: 29 PPYETKEFL----KQCYLIGYKSLPLVAITGFIMGLVLTIQSRPTLVTFGAESWLPGMVA 84 Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264 + +REI ++TA++ AG+ S I AE+GSMK+ E+IDA+ ++ L+ RI A Sbjct: 85 LSLIREIAPVITALICAGKISSGIGAELGSMKVTEQIDAMEVSAINPYNYLVVTRILACT 144 Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI 324 + +P+L I A+ IIG I + D+ F + ++ + +++ IK F I Sbjct: 145 LMVPILVIFADAVGIIGGYAGINIHGDVNFYRYLTQIIQSLEFSDLIPATIKTFFFGYFI 204 Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 G++ +GF + S+G + VV + + IID Sbjct: 205 GMIGCYKGFNAANGTESVGHAANSAVVTASLSIFIID 241 >gi|251791365|ref|YP_003006086.1| hypothetical protein Dd1591_3807 [Dickeya zeae Ech1591] gi|247539986|gb|ACT08607.1| protein of unknown function DUF140 [Dickeya zeae Ech1591] Length = 260 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 69/219 (31%), Positives = 121/219 (55%), Gaps = 7/219 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 L +Q+Y VGV + ++++ G V+ QG L+ + AE S+ +M L L RE+G + Sbjct: 44 LRKQLYSVGVQSLLIIMVSGVFIGMVLGLQGYLVLTTYSAEA-SLGMMVALSLLRELGPV 102 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +++PR WA +I++PLLT++ Sbjct: 103 VTALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRVVAPRFWAGVITMPLLTVIF 162 Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRF-HSTATLANIFTGLIKAPFMACAIGIVAMKE 331 I G ++ V WK D F F+S ++ A ++ ++K+ A + +A+ Sbjct: 163 VAVGIWGGALVGVDWKGIDSGF--FWSAMQNAVAWQKDLLNCVLKSLVFAITVTWIALFN 220 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+ S + + T VV S V+ +D + F Sbjct: 221 GYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 259 >gi|292490486|ref|YP_003525925.1| hypothetical protein Nhal_0342 [Nitrosococcus halophilus Nc4] gi|291579081|gb|ADE13538.1| protein of unknown function DUF140 [Nitrosococcus halophilus Nc4] Length = 260 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 66/216 (30%), Positives = 113/216 (52%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI QMY VGV +P++++ G V+ QG L FGAE ++S+ +RE+G ++ Sbjct: 43 LIAQMYSVGVLTLPIIVVSGAFVGMVLGLQGYNTLVDFGAEESLGVIVSLSLVRELGPVV 102 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 +A++ AGR+GSA+ AEIG MK E++ + M +D +R + +PR +A S+PLL + + Sbjct: 103 SALLFAGRAGSALTAEIGLMKATEQLSGMEMMAVDPMRRVAAPRFFAGCFSMPLLAAIFS 162 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHS-TATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 ++G V + F+S+ + T +I G+IK+ + +A+ EG+ Sbjct: 163 AVGVLGGYFVGVGLLGVDEGAFWSQMQANTDWEEDILNGVIKSLVFGLVVTWIAVFEGYD 222 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV S V+ +D + F Sbjct: 223 TAPTSEGVARATTRTVVHSAFAVLALDFVLTALMFG 258 >gi|119946509|ref|YP_944189.1| ABC-type transporter inner membrane protein [Psychromonas ingrahamii 37] gi|119865113|gb|ABM04590.1| ABC-type transporter inner membrane protein [Psychromonas ingrahamii 37] Length = 234 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 120/215 (55%), Gaps = 1/215 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I Q++ +G+ +P+++ G V++ QG L + AE ++++ LRE+G ++T Sbjct: 19 IGQIFQLGILSLPIILTAGLFIGMVLSLQGYNVLVDYAAEESLGSMVALSLLRELGPVVT 78 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+GSA+ AEIG M+ E+I ++ M + ++ +I+PR A I++LPLLT++ N Sbjct: 79 ALLFAGRAGSALTAEIGLMQSTEQIASMEMMAVSPLKRVIAPRFLAGIVTLPLLTLMFNV 138 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFH-STATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 AI G ++ + + ++S S L ++ G+IK+ I VA+ G+ V Sbjct: 139 VAIWGGYLIGVSWMGVDGGAYWSVMQGSVDYLPDVMNGVIKSIVFGVMITWVALYNGYYV 198 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 ++ + + T VV S +V+ +D + +F F Sbjct: 199 MPNAIGISRSTTQTVVVSSLLVLAMDFILTVFMFG 233 >gi|208780390|ref|ZP_03247731.1| toluene tolerance protein Ttg2B [Francisella novicida FTG] gi|208743758|gb|EDZ90061.1| toluene tolerance protein Ttg2B [Francisella novicida FTG] Length = 241 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 112/195 (57%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I Q+ VGV+ + +++ G V++ QG + LS+FGA ++++ LRE+G ++T Sbjct: 26 IIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGAHSLLGVMVALSVLRELGPVVT 85 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+ S+I +EIG MK ++I++++ M ++ + ++S R WA +IS P+L ++ Sbjct: 86 AMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFILSTRFWACMISGPILALIFAS 145 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 AI+ I+ I + F+S S+ T ++I G+IK+ A +A+ +G+ Sbjct: 146 VAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGIIKSIVFAFITAWIALYQGYYCI 205 Query: 337 VHSNSLGKKVTTCVV 351 SN + K T VV Sbjct: 206 PDSNGIAKATTKTVV 220 >gi|239787370|emb|CAX83846.1| ABC transporter permease protein [uncultured bacterium] Length = 168 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 61/163 (37%), Positives = 101/163 (61%) Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 M++ +RE L+T +++AGRSGSA+ A +G+M+IN+EIDA+ MG+D VR L++P + A Sbjct: 1 MALSVVREFAPLITGIVVAGRSGSALAARLGTMRINQEIDALHVMGIDPVRFLVAPALLA 60 Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322 +++ LPLLT+LA+F A+ GA + I + F ++ R + ++ GL K+ A Sbjct: 61 MLVVLPLLTLLADFVALTGAGMYICMDLGMDFPAYWERVIEALKVDDLGHGLGKSVIFAV 120 Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + +V + G V + +GK T VV +IS +++ D LFA Sbjct: 121 LVTLVGVVNGSLVQGGAEGVGKATTRSVVHAISAIVVTDMLFA 163 >gi|186472351|ref|YP_001859693.1| hypothetical protein Bphy_3498 [Burkholderia phymatum STM815] gi|184194683|gb|ACC72647.1| protein of unknown function DUF140 [Burkholderia phymatum STM815] Length = 382 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 66/241 (27%), Positives = 123/241 (51%), Gaps = 2/241 (0%) Query: 135 VISNTGEFCASSY--KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 ++ T C +++ + + + +++ M G + +V +++ + GA++A GA Q + Sbjct: 142 LVGETALHCTAAFAHRVRTRGVDVLQLMREAGAGALAIVAIVNGLVGAILAFIGAVQFQR 201 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 FGA I+ +L+ I +RE+ L TA+++AGR+G A A + +M+ NEEIDA+ +G+ Sbjct: 202 FGAGIYVANLVGIAVVREMAALATAIVMAGRTGGAYAAHLATMQGNEEIDALNAVGIPVF 261 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 L+ PR+ AL+ +PLL + + ++ IV DI + + Sbjct: 262 DFLVLPRVIALVSMMPLLYVYSCAVGLLSGFIVTLATLDITAVTYLQQLRGAVDGVQFAI 321 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 GL K+ + + G G + +G+ T+ VV I VI +D++FA+ A+G Sbjct: 322 GLAKSIAFGSFVALAGCHIGLKAGRSAAEVGRAATSAVVVGIVGVISLDAIFAVCTNALG 381 Query: 373 I 373 I Sbjct: 382 I 382 >gi|227825164|ref|ZP_03989996.1| membrane protein [Acidaminococcus sp. D21] gi|226905663|gb|EEH91581.1| membrane protein [Acidaminococcus sp. D21] Length = 260 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 68/217 (31%), Positives = 112/217 (51%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 ++RQM +G +P+V + S TG V++ Q A + +FGA +++I RE+ +L Sbjct: 43 VLRQMAKLGADSLPIVSMTSMCTGMVLSVQTAKEFVRFGAADSVGGIVAIAMARELAPIL 102 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 V++AGR G+AI AEIG+MK+ E+IDA+R M + L++PR A+++ +P+L I AN Sbjct: 103 AGVVVAGRIGAAIAAEIGTMKVTEQIDALRVMATSPTQYLVAPRFLAIVLMMPILVIYAN 162 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 IG V Y I +F ++ GLIK I ++ +G Sbjct: 163 LVGDIGGGFVAMNYAGIGSHMFIESIRGFVESWDLVGGLIKGSVFGAIIAVIGCHKGLNA 222 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 + +GK T VV SI ++ I + ++ + G Sbjct: 223 QQGAEGVGKATTASVVLSIILIFIFNYFLSVMLYVHG 259 >gi|37527885|ref|NP_931230.1| hypothetical protein plu4033 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787321|emb|CAE16405.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 260 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 70/218 (32%), Positives = 116/218 (53%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L +Q+Y VGV + ++I+ G V+ QG L+ + AE +++I LRE+G ++ Sbjct: 44 LRQQLYSVGVRSLLIIIVSGLFIGMVLGLQGYLILTTYSAEASLGMMVAISLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E+I ++ M +D +R +I+PR WA IS+PLL+++ Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLRRVIAPRFWAGFISMPLLSLIFV 163 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 I G ++ V WK D F F+S S ++ IK+ A + +A+ G Sbjct: 164 AVGIWGGAMVGVDWKGIDSGF--FWSSMQSAIEWQKDLLNCFIKSVVFAITVTWIALFNG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + S + + T VV + V+ +D + F Sbjct: 222 YDAIPTSEGISRATTRTVVHASLAVLGLDFVLTALMFG 259 >gi|187931162|ref|YP_001891146.1| ABC-type transport system permease protein [Francisella tularensis subsp. mediasiatica FSC147] gi|187712071|gb|ACD30368.1| ABC-type transport system permease protein [Francisella tularensis subsp. mediasiatica FSC147] Length = 254 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 111/195 (56%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I Q+ VGV+ + +++ G V++ QG + LS+FGA ++++ LRE+G ++T Sbjct: 39 IIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGAHSLLGVMVALSVLRELGPVVT 98 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+ S+I +EIG MK ++I++ + M ++ + ++S R WA +IS P+L ++ Sbjct: 99 AMLFAGRACSSITSEIGLMKATDQINSFKVMNVNPISFILSTRFWACMISGPILALIFAS 158 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 AI+ I+ I + F+S S+ T ++I G+IK+ A +A+ +G+ Sbjct: 159 VAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGIIKSIVFAFITAWIALYQGYYCI 218 Query: 337 VHSNSLGKKVTTCVV 351 SN + K T VV Sbjct: 219 PDSNGIAKATTKTVV 233 >gi|312890492|ref|ZP_07750028.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM 18603] gi|311296950|gb|EFQ74083.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM 18603] Length = 257 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 110/206 (53%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +RQ Y +G + +V + SF+ G V+ Q L +FGA ++ + +REIG ++ Sbjct: 40 FVRQCYEIGYRSITLVGITSFIMGVVLTLQSRPTLVKFGASSMLPFMVCVSIIREIGPVI 99 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AG+ S I AE+GSMK+ E+IDA+ G + ++ L+ RI A I +P+LT++ + Sbjct: 100 TAIICAGKISSGIGAELGSMKVTEQIDAMEVSGANPMQYLVVTRILATTIMIPILTLMGD 159 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 + G + + + ++F++ S+ +++ +IK F A+G + +GF Sbjct: 160 VLGLFGGFLAVHFADHTSWQLYFNKCVSSVDFSDLLPAVIKTVFFGFAVGFIGCYKGFNS 219 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361 + S+G + VV + + +D Sbjct: 220 NRGTESVGIAANSAVVSASLWIFFLD 245 >gi|258645550|ref|ZP_05733019.1| toluene tolerance ABC efflux transporter, permease [Dialister invisus DSM 15470] gi|260402906|gb|EEW96453.1| toluene tolerance ABC efflux transporter, permease [Dialister invisus DSM 15470] Length = 253 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 111/213 (52%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I+Q +GV P+V L TG V++ Q A +L+++GA +++I RE+G +L Sbjct: 41 IKQCLDLGVLSFPIVALTLLFTGMVLSVQIAGELTKYGAGFTVGAIVAIGMGRELGPVLC 100 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 V++AGR G+AI AEIG+M++ E+IDA+R M + V L+ PR+ + + LP+LT+ Sbjct: 101 GVVLAGRVGAAITAEIGTMRVTEQIDALRCMAVSPVGYLVLPRLLSCMAMLPILTVFGVS 160 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + G IV + + VF ++++ G++K+ + +V G Sbjct: 161 IGVFGGMIVASLTHGVSSYVFIHSIEVFCIPSDLYIGVMKSVVFGMIVALVGCDRGMTCE 220 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+ T VV SI ++ + L + F Sbjct: 221 AGAEGVGRATTQSVVYSIIMIFAANYLLSSILF 253 >gi|262280246|ref|ZP_06058030.1| toluene tolerance efflux transporter [Acinetobacter calcoaceticus RUH2202] gi|262258024|gb|EEY76758.1| toluene tolerance efflux transporter [Acinetobacter calcoaceticus RUH2202] Length = 258 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 113/209 (54%), Gaps = 1/209 (0%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 S+ G I QM+ VGV + ++ + G V+ QG L G+E ++S+ Sbjct: 31 SFPTTGGFGRFIYQMHRVGVMSLLIITVSGLFIGLVLGLQGYSILVNIGSESMLGTMVSL 90 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 LRE+ ++ A++ AGR+GSA+ AEIGSMK +E++ ++ +G+D ++ ++SPR+WA ++ Sbjct: 91 TLLRELAPVVAALLFAGRAGSALTAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGVV 150 Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAI 324 SLP+LT++ I+G +V + + F+S + ++ G+IK+ A Sbjct: 151 SLPMLTVIFAAIGIVGGKMVGVDFLGVDEGSFWSGMQNNVQFGHDVVNGIIKSIVFALLC 210 Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 +A+ +G+A + +T VV S Sbjct: 211 TWIAVYQGYACDPTPEGIATAMTRTVVYS 239 >gi|293610802|ref|ZP_06693102.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827146|gb|EFF85511.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|325123627|gb|ADY83150.1| toluene tolerance efflux transporter (ABC superfamily, membrane) [Acinetobacter calcoaceticus PHEA-2] Length = 258 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 113/209 (54%), Gaps = 1/209 (0%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 S+ G I QM+ VGV + ++ + G V+ QG L G+E ++S+ Sbjct: 31 SFPSSGGFGRFIYQMHRVGVMSLLIITVSGLFIGLVLGLQGYSILVNVGSESMLGTMVSL 90 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 LRE+ ++ A++ AGR+GSA+ AEIGSMK +E++ ++ +G+D ++ ++SPR+WA ++ Sbjct: 91 TLLRELAPVVAALLFAGRAGSALTAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGVV 150 Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAI 324 SLP+LT++ I+G +V + + F+S + ++ G+IK+ A Sbjct: 151 SLPMLTVIFAAIGIVGGKMVGVDFLGVDEGSFWSGMQNNVQFGHDVVNGIIKSIVFALLC 210 Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 +A+ +G+A + +T VV S Sbjct: 211 TWIAVYQGYACDPTPEGIATAMTRTVVYS 239 >gi|304413072|ref|ZP_07394545.1| permease component of phospholipid ABC transporter [Candidatus Regiella insecticola LSR1] gi|304283915|gb|EFL92308.1| permease component of phospholipid ABC transporter [Candidatus Regiella insecticola LSR1] Length = 260 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 69/219 (31%), Positives = 117/219 (53%), Gaps = 7/219 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 L++Q++ +G + ++++ G V+ QG L + AE S+ +M L L RE+G + Sbjct: 44 LVKQLHNLGTQSLSIIVVSGLFIGMVLGLQGYLILMTYSAEA-SLGMMVALSLLRELGPV 102 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+PLL + Sbjct: 103 ITALLFAGRAGSALTAEIGLMKATEQLASLEMMAIDPLRRVIAPRFWAGVISMPLLMAIF 162 Query: 275 NFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331 I+G +I V WK D F F+S + ++ LIK+ A+ +A+ Sbjct: 163 IAVGIVGGAIVGVDWKGIDAGF--FWSAMQNAIEWRVDLINSLIKSLVFTVAVTWIALFN 220 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+ S + + T VV S V+ +D + F Sbjct: 221 GYDALPTSEGISQATTRTVVYSSLAVLGLDFVLTTLMFG 259 >gi|256424262|ref|YP_003124915.1| hypothetical protein Cpin_5283 [Chitinophaga pinensis DSM 2588] gi|256039170|gb|ACU62714.1| protein of unknown function DUF140 [Chitinophaga pinensis DSM 2588] Length = 264 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 62/212 (29%), Positives = 110/212 (51%), Gaps = 1/212 (0%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 +IRQ Y VG + ++ + F+TG V +Q LS+FGA + L++I +R + L Sbjct: 47 EVIRQCYQVGYKSLALITMTGFITGLVFTKQSRPSLSEFGATSWLPSLIAIAVIRALAPL 106 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AG+ GS+I AE+ SM++ E+IDA+ ++ + L++ R+ A IS+P+L Sbjct: 107 VTALICAGKVGSSIGAELASMRVTEQIDAMEVSAINPFKFLVTTRVMATTISIPILVGYT 166 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 ++G+ + I F FF + T +KA IG+V+ +G+ Sbjct: 167 GLVGLLGSFLDIHLNEQTSFTSFFQEAFKNIYFLDFITTGVKAVVFGFTIGVVSCYQGYH 226 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + +GK VV S+ +I I+ +F + Sbjct: 227 ATQGTQGVGKAANISVVISM-FLIFIEEIFIV 257 >gi|145588286|ref|YP_001154883.1| hypothetical protein Pnuc_0097 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145046692|gb|ABP33319.1| protein of unknown function DUF140 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 265 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 68/227 (29%), Positives = 122/227 (53%), Gaps = 7/227 (3%) Query: 150 KGFLLS----LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 GFLL +I Q+ +VG ++ + G V+ QG + L+++G+E ++ L+ Sbjct: 39 SGFLLKRPRLVIDQILFVGNHSFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQ-ALGLLVA 97 Query: 206 LQL-REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264 L L RE+G ++TA++ AGR+G+++ AEIG MK E++ A+ M +D + +I+PR+WA I Sbjct: 98 LSLTRELGPVITALLFAGRAGTSLTAEIGLMKAGEQLSAMEMMAVDPLGRVIAPRLWAGI 157 Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACA 323 IS+P+L + ++G +V + F+S+ L ++I GLIK+ A Sbjct: 158 ISMPILATIFTAVGVLGGYLVGVPLIGVDSGAFWSQMQGGVDLFSDIGNGLIKSLVFGVA 217 Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +A+ +G+ + + T VV S V+ +D L F+ Sbjct: 218 VTFIALYQGYEAKPTPEGVSQATTRTVVISSLSVLALDFLLTAMMFS 264 >gi|53803964|ref|YP_114401.1| hypothetical protein MCA1968 [Methylococcus capsulatus str. Bath] gi|53757725|gb|AAU92016.1| conserved hypothetical protein TIGR00056 [Methylococcus capsulatus str. Bath] Length = 263 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 70/217 (32%), Positives = 113/217 (52%), Gaps = 3/217 (1%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 LI QMY VGV + ++++ G V+ QG + LS FGAE S+ +M L RE+G + Sbjct: 46 LIVQMYSVGVLSILLIMISGLFVGMVLGLQGYYVLSDFGAE-ESLGVMVAASLVRELGPV 104 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGR+GSA+ AEIG MK E++ + M +D V+ +I+PR +A ++S+PLL L Sbjct: 105 VTALLFAGRAGSALTAEIGLMKATEQLSGMEMMAVDPVKRIIAPRYFAGVVSMPLLAALF 164 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGF 333 + ++G V + F S+ + +I G IK+ + +A+ EG+ Sbjct: 165 SIIGVLGGYFVGVGLLGVDEGAFRSQMQAKIDFDEDIVNGFIKSLVFGAVVTWIAVFEGY 224 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV S V+ D + F Sbjct: 225 DATPTSEGVSRATTRSVVYSAFAVLGCDFVLTALMFG 261 >gi|126657935|ref|ZP_01729088.1| hypothetical protein CY0110_13761 [Cyanothece sp. CCY0110] gi|126620875|gb|EAZ91591.1| hypothetical protein CY0110_13761 [Cyanothece sp. CCY0110] Length = 263 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 62/205 (30%), Positives = 107/205 (52%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + QM VG + + ++ + G V Q A + FGA ++++ RE+ +LT Sbjct: 43 LEQMSVVGPESLTIALITAGFVGMVFTIQVAREFISFGAASTVGGVLALALTRELAPVLT 102 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV++AGR GSA AEIG+M++ E+IDA+ + D + L+ PR+ A + LP+L IL+ Sbjct: 103 AVVVAGRVGSAFAAEIGTMRVTEQIDALYMLKTDPIDYLVLPRVLACCLMLPVLNILSLL 162 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + + G ++ YDI VF + + L ++ T +IK+ I ++ G Sbjct: 163 TGMTGGLLIANGLYDISPYVFLTSIRNFLELWDLVTSVIKSIAFGGLIAVIGCSWGLTTT 222 Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361 + +G+ TT VV S+ V +I+ Sbjct: 223 GGAKGVGQSTTTAVVTSLLAVFVIN 247 >gi|308051140|ref|YP_003914706.1| hypothetical protein Fbal_3434 [Ferrimonas balearica DSM 9799] gi|307633330|gb|ADN77632.1| protein of unknown function DUF140 [Ferrimonas balearica DSM 9799] Length = 260 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 64/207 (30%), Positives = 115/207 (55%), Gaps = 1/207 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q+Y VGV + ++++ G V+ QG L FG E ++++ LRE+G ++ Sbjct: 44 LIKQLYQVGVLSMVIILVSGLFIGMVLGLQGYIILVDFGTEESLGPMVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D ++ +I+PR WA +IS+PLL ++ Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLASMEMMAVDPLQRVIAPRFWAGVISMPLLALMFT 163 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334 I G +V ++ I F+S ++ +I LIK+ A + +A+ +G+ Sbjct: 164 TIGIWGGHLVGVEWKGIDPGAFWSILTASVEWQKDILNCLIKSVVFAFVVTWIALFKGYD 223 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIID 361 + + + T VV + V+ +D Sbjct: 224 AVPTAEGISRATTETVVHASLAVLALD 250 >gi|260886513|ref|ZP_05897776.1| toluene tolerance ABC efflux transporter, permease [Selenomonas sputigena ATCC 35185] gi|330839644|ref|YP_004414224.1| protein of unknown function DUF140 [Selenomonas sputigena ATCC 35185] gi|260863656|gb|EEX78156.1| toluene tolerance ABC efflux transporter, permease [Selenomonas sputigena ATCC 35185] gi|329747408|gb|AEC00765.1| protein of unknown function DUF140 [Selenomonas sputigena ATCC 35185] Length = 256 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 66/203 (32%), Positives = 102/203 (50%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 QM ++GV +V L TG V+ Q A + +FGA+ +++I RE+G +L V Sbjct: 46 QMSHLGVDSFAIVSLTMLFTGMVMTLQVAHEFIRFGAQSTIGGVIAIAIGRELGPVLVGV 105 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 + AGR GSAI AEI +MK+ E+IDA+R M + L+ PR+ A + +PLLTI + Sbjct: 106 VCAGRVGSAITAEISTMKVTEQIDALRVMATSPIGYLVVPRMIACMCMVPLLTIFGDVIG 165 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 + G V Y I F + H A ++ GLIKA I ++ G Sbjct: 166 VFGGWFVAVHYAGIASYTFTNSIHVFAVPHDVTGGLIKAAVFGIVIAVLGAWYGLHAPEG 225 Query: 339 SNSLGKKVTTCVVQSISIVIIID 361 + +G+ T VV +I + ++ Sbjct: 226 AEGVGRATTKSVVAAIVCIFFLN 248 >gi|189500799|ref|YP_001960269.1| hypothetical protein Cphamn1_1871 [Chlorobium phaeobacteroides BS1] gi|189496240|gb|ACE04788.1| protein of unknown function DUF140 [Chlorobium phaeobacteroides BS1] Length = 264 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 61/212 (28%), Positives = 110/212 (51%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 K + + + Q G +P+V++ S GA++A + L FGA+ ++ Sbjct: 40 KIRRYWRDFLDQAKIAGADSLPIVLVSSIAIGALLAVEVGNLLEDFGAKTMLGRSTALSV 99 Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267 +RE+G L+ +M++ R GS AE+G+MKI+E+IDA+R G D V L+ PR+ A +I Sbjct: 100 IRELGPLIMGLMLSARYGSRNGAELGAMKISEQIDALRAFGTDPVAKLVMPRLVAALIMF 159 Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327 LT +A+FS + A+++ Y+ I +F++ + G +KAP A I +V Sbjct: 160 IPLTAIADFSGLYSAALLAEHYHKIDPGIFWNAVFPRLVFKDFVVGFLKAPVFAIIITLV 219 Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 + GF + +G+ +V S ++++ Sbjct: 220 SCFNGFIAQGGTAGVGRSTIKGIVVSSGLILV 251 >gi|323140905|ref|ZP_08075818.1| hypothetical protein HMPREF9443_00583 [Phascolarctobacterium sp. YIT 12067] gi|322414643|gb|EFY05449.1| hypothetical protein HMPREF9443_00583 [Phascolarctobacterium sp. YIT 12067] Length = 283 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 69/215 (32%), Positives = 115/215 (53%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 ++RQM +G +P+V++ TG V + Q A + + GA +++I RE+ + Sbjct: 68 EVVRQMALLGADSLPIVMMTILCTGMVFSVQTAKEFVRLGASSSVGGIVAIAMARELVPV 127 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 LT V++AGR G+AI AE+G+MK+ E+IDA+R M + V L+ PR AL++ +P+L + A Sbjct: 128 LTGVVVAGRIGAAIAAELGTMKVTEQIDALRVMAANPVSYLVVPRFIALVLMMPVLVVFA 187 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 NF IG +V Y I + + + A ++F G++K+ I IV +G Sbjct: 188 NFIGNIGGWVVAHYYAGIGSFTYENSIRTLAEFYDVFGGMVKSCVFGAIIAIVGCYKGLN 247 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G T VV SI +V I + +I + Sbjct: 248 APNGAEGVGLATTASVVLSIILVFITNYFLSIVLY 282 >gi|119493784|ref|ZP_01624353.1| hypothetical protein L8106_03769 [Lyngbya sp. PCC 8106] gi|119452479|gb|EAW33666.1| hypothetical protein L8106_03769 [Lyngbya sp. PCC 8106] Length = 259 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 8/209 (3%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ----FGAEIFSIDLMSILQLREIG 212 + QM VG P +LI+ +T + Q+S+ GA + ++++ RE+ Sbjct: 39 LEQMAAVG----PESLLIALITAGFVGMVFTIQVSREFITLGAGNLAGGVLALSLARELS 94 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 +LTAV+I GR GSA AEIG+M++ E+IDA+ + D V L+ PR+ A + LPLL I Sbjct: 95 PVLTAVIITGRVGSAFAAEIGTMQVTEQIDALYVLKTDPVDYLVIPRVIACCLMLPLLNI 154 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 + + + G ++ Y+IP +F + TL ++ +G IKA I +++ G Sbjct: 155 ICLMTGLAGGLLISSSLYNIPPNMFLESVQNFLTLWDLVSGEIKALIFGGTIAVISTNWG 214 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + +G+ TT VV + + I+D Sbjct: 215 LTTTGGAKGVGQSTTTAVVTCLLSIFILD 243 >gi|289523217|ref|ZP_06440071.1| STAS domain protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503760|gb|EFD24924.1| STAS domain protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 259 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 70/218 (32%), Positives = 117/218 (53%), Gaps = 1/218 (0%) Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 L S+ QM VGV V +V +IS TG V+A Q Q +FGA + ++++ +RE+ Sbjct: 40 LRSVTDQMERVGVQSVFMVSVISAFTGMVMAVQTLDQFLKFGASGYIGGVIALSMIREMS 99 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 +LT +++AGR GS++ AEIG+MK+ E++DA+R GLD + PRI A ++ +P+LTI Sbjct: 100 PVLTGIVVAGRVGSSMAAEIGTMKVTEQLDALRAFGLDEYVFVGVPRILASLVMVPILTI 159 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 + G + + + I +F + +I GL+K+ I IVA G Sbjct: 160 FSMTVGTFGGYLYV-AFRGIHPLIFKDSITLLVNVYDINGGLLKSLVYGFVISIVACACG 218 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 F + +G+ T VV S +++I++ + + F Sbjct: 219 FRAEGGAKGVGETTTLAVVWSNMLILILNYMLSTLLFG 256 >gi|171915264|ref|ZP_02930734.1| hypothetical protein VspiD_28855 [Verrucomicrobium spinosum DSM 4136] Length = 264 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 66/218 (30%), Positives = 112/218 (51%), Gaps = 3/218 (1%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q+ +G VVI+ TGAV Q F+ FG E ++S+ RE+G +L Sbjct: 44 QQIVSIGYGSQVVVIVTGAFTGAVFTAQTYFKFKDFGVETGVGAIVSVAMCRELGPVLAG 103 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +M+ GR G+A+ AEIG+MK+ E+IDA+R +G+ V L+ PR +A++IS+PLL + Sbjct: 104 LMVTGRVGAAMAAEIGTMKVTEQIDALRALGVHPVDYLMLPRFFAMLISMPLLIAESITF 163 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 + + V+ + +P A F+ +I G+IK I +++ +G Sbjct: 164 GLAASYCVVVFGFGVPSAWFWQHVVEHTNEEDIIYGMIKGLIFGILITVISCHQGLTASD 223 Query: 338 HSNSLGKKVTTCVVQSISIVIIID---SLFAIFYFAIG 372 + +G T VV S ++I + SL ++F +G Sbjct: 224 GAVGVGIGTTRAVVYSSLALLICNFFLSLLLNYFFPLG 261 >gi|296125262|ref|YP_003632514.1| hypothetical protein Bmur_0208 [Brachyspira murdochii DSM 12563] gi|296017078|gb|ADG70315.1| protein of unknown function DUF140 [Brachyspira murdochii DSM 12563] Length = 268 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 68/220 (30%), Positives = 118/220 (53%), Gaps = 8/220 (3%) Query: 145 SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF--GAEIFSIDL 202 SS+ FK L Q+ +GV V + TG V++ Q A L G F + Sbjct: 42 SSFSFK----LLKEQIIRMGVDSFVVAAVTVLCTGMVMSLQIAVVLDSVLKGISQFVGSM 97 Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 + ++E+ +L A++ AGR GS++ AEIG+M+++E++DA++T+ + + + PR WA Sbjct: 98 VGKAMVKELSPMLLALIFAGRVGSSVTAEIGTMQVSEQLDALKTLYTNPIEYVAVPRFWA 157 Query: 263 LIISLPLLTILANFSAIIGASIV-IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMA 321 +ISLP+LT+ AN ++G +IV ++ + P +F R + ++ + LIK+ Sbjct: 158 AVISLPMLTVSANIIGVVGGAIVTVFVLHSDPMH-YFDRAIAVISVGDFIGSLIKSTIFG 216 Query: 322 CAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + I++ GF + +GK TT VV S I++I D Sbjct: 217 AEVIIISCFYGFRTSGGAEGVGKATTTSVVYSFMIILITD 256 >gi|291613160|ref|YP_003523317.1| hypothetical protein Slit_0691 [Sideroxydans lithotrophicus ES-1] gi|291583272|gb|ADE10930.1| protein of unknown function DUF140 [Sideroxydans lithotrophicus ES-1] Length = 262 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 71/257 (27%), Positives = 135/257 (52%), Gaps = 8/257 (3%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 IGK++V I + A + + +G FK F L+ +R++++ GV + ++++ Sbjct: 10 IGKRVVNAIWRTGYGARFFLMTLLYSG------MSFKRFRLT-VREIFFSGVMSLIIILV 62 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 G V+ QG L ++G+E L+++ +RE+G +L A++ A R+GSA+ AEIG Sbjct: 63 AGMFVGMVLGLQGYETLKRYGSESALGSLVALSLVRELGPVLAALLFASRAGSAMTAEIG 122 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 MK E+I A+ M ++ + +++PR WA +IS+PLL L + + G +V + Sbjct: 123 LMKATEQISAMELMAVNPIARVVAPRFWAGVISMPLLAALFSAMGVFGGYVVGVVNIGVD 182 Query: 294 FAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 F+S+ ++ +I G+IK+ A+ +A+ EG+ + + T VV+ Sbjct: 183 EGSFWSQMQASVDFQHDILNGVIKSLVFGLAVTAIALFEGYDAPPTAEGVSGATTRTVVE 242 Query: 353 SISIVIIIDSLFAIFYF 369 S ++++D + F F Sbjct: 243 SSLAILMLDFILTAFMF 259 >gi|114328883|ref|YP_746040.1| ABC transporter permease [Granulibacter bethesdensis CGDNIH1] gi|114317057|gb|ABI63117.1| ABC transporter permease protein [Granulibacter bethesdensis CGDNIH1] Length = 259 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 65/223 (29%), Positives = 114/223 (51%), Gaps = 18/223 (8%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 +R + +G +PVV L + TG V+A Q ++F AE L+S+ RE+G +L Sbjct: 45 LRALVEIGYFSLPVVALTAIFTGMVLALQSYTGFARFSAESAIASLVSLSVTRELGPVLA 104 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 +M+AGR G+A+ AE+G+M++ ++IDA+ T+ ++ L++PR+ A I+LPLL I+A+ Sbjct: 105 GLMVAGRVGAAMAAELGTMRVTDQIDALTTLSTHPMKYLVAPRLLAGTIALPLLVIIADI 164 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN---------IFTGLIKAPFMACAIGIV 327 ++G W I F+S LAN + +GL KA I + Sbjct: 165 LGVMGG----WLVASIKLG-----FNSHTYLANTIASIHMDDVMSGLTKAAVFGFLIALQ 215 Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+ + +G T+ VV + +++ D + +F+ Sbjct: 216 GCYHGYNSRGGAQGVGSATTSAVVTASVLILAFDYVLTELFFS 258 >gi|319945411|ref|ZP_08019671.1| tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Lautropia mirabilis ATCC 51599] gi|319741197|gb|EFV93624.1| tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Lautropia mirabilis ATCC 51599] Length = 260 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 69/225 (30%), Positives = 122/225 (54%), Gaps = 7/225 (3%) Query: 153 LLSLIR------QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206 LLSL R Q+Y+VG + ++++ G V+ QG + L ++GAE L+++ Sbjct: 34 LLSLKRPRLISEQVYFVGNRSLSIILISGLFVGFVLGLQGYYNLERYGAESSLGLLVALS 93 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 LRE+G +++A++ AGR+ ++I A IG MK E++ A+ MG+D ++ +++PR A++I+ Sbjct: 94 LLRELGPVVSALLFAGRACTSITAGIGLMKSGEQLIAMEMMGVDPMKRVLAPRFMAVMIA 153 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIG 325 LPLL +L + I+GA +V + + F+S+ + A++ G+IK+ A G Sbjct: 154 LPLLALLFSAVGIVGAWVVGVQMIGVDPGSFWSQMQGGVSFRADVLNGVIKSFVFALLCG 213 Query: 326 IVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +A+ G + + TT VV S V+ D L F Sbjct: 214 FIALVVGHESDATPEGVARATTTTVVISSLAVLASDVLMTALMFG 258 >gi|186684391|ref|YP_001867587.1| hypothetical protein Npun_R4269 [Nostoc punctiforme PCC 73102] gi|186466843|gb|ACC82644.1| protein of unknown function DUF140 [Nostoc punctiforme PCC 73102] Length = 265 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 107/203 (52%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + QM VG + + +L + GAV Q A + FGA ++SI RE+ +LT Sbjct: 42 LEQMAAVGPDSLFIALLTAIFVGAVFTIQVAREFINFGAGNIIGGVLSIALTRELSPVLT 101 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV++AGR GSA AEIG+M++ E+IDA+ + D + L+ PR+ A + LP+LT+L+ Sbjct: 102 AVVLAGRVGSAFAAEIGTMRVTEQIDAMLMLKTDPIDYLVIPRVIACCLMLPILTLLSLI 161 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + + G I+ Y++ VF + + +I + ++KA I ++ G Sbjct: 162 TGMFGGFIIATNVYNLSDTVFLDSARNFLGIWDIISAMLKAFCFGILIAVIGCSWGLTTT 221 Query: 337 VHSNSLGKKVTTCVVQSISIVII 359 + +G+ TT VV ++ I+ + Sbjct: 222 GGAKGVGQSTTTAVVTALLIIFV 244 >gi|170078977|ref|YP_001735615.1| ABC-type toluene export system, permease component [Synechococcus sp. PCC 7002] gi|169886646|gb|ACB00360.1| ABC-type toluene export system, permease component [Synechococcus sp. PCC 7002] Length = 259 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 61/196 (31%), Positives = 101/196 (51%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 QM G + V+L++F G + Q A +L+ FGAE F +I RE+ +LTA Sbjct: 42 EQMLTAGPKALVPVLLVAFFGGMIFTIQTARELTTFGAESFVGGAFAIAFCRELAPILTA 101 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +IAG+ GSA AE+GSMKI E+IDA+ + + V L+ PR+ A + LP+LT+ A Sbjct: 102 SIIAGQVGSAFAAELGSMKITEQIDALYMLRSNPVDYLVMPRVVACCLMLPILTVFALVV 161 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 +IG + +++YD+ F + + ++ +K +GI+ G Sbjct: 162 GVIGGTGAAYQFYDLAPINFLTSVQTFLQPRDLINVGVKGILFGLLVGIIGCSWGLTTVG 221 Query: 338 HSNSLGKKVTTCVVQS 353 + +G+ T+ VV + Sbjct: 222 STQQVGRSATSAVVTT 237 >gi|255530709|ref|YP_003091081.1| hypothetical protein Phep_0797 [Pedobacter heparinus DSM 2366] gi|255343693|gb|ACU03019.1| protein of unknown function DUF140 [Pedobacter heparinus DSM 2366] Length = 269 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 70/243 (28%), Positives = 121/243 (49%), Gaps = 7/243 (2%) Query: 134 LVISNTGEFCASSYKFKGFL-----LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 L + + +F A +K +GFL L RQ Y +G ++ F+TG V +Q Sbjct: 26 LTLYDVYKFIARFFK-EGFLPPYEARELFRQCYEIGYRSALLISTTGFITGIVFTKQSRP 84 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 LS+FGA + L+ I LR + LLT ++ AG+ GS+I AE+GSM++ E+IDA+ Sbjct: 85 SLSEFGATSWLPSLVGIALLRTLAPLLTGLIAAGKVGSSIGAELGSMRVTEQIDAMEVSA 144 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + + L+S R+ A I++P+LT ++GA + + FF T Sbjct: 145 TNPFKFLVSTRVLAATITIPILTFYTAMVGMLGALLNVSLSEGTSARAFFQSSLEQITFL 204 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 +I +KA IG+V +G+ + +GK + VV ++ +I I+ + ++ + Sbjct: 205 DITASTVKAILFGFTIGMVGCYQGYNSSKGTEGVGKAANSAVVIAM-FLIFIEEVVSVQF 263 Query: 369 FAI 371 F + Sbjct: 264 FGL 266 >gi|126643117|ref|YP_001086101.1| toluene tolerance efflux transporter [Acinetobacter baumannii ATCC 17978] Length = 235 Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 113/206 (54%), Gaps = 1/206 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + QM+ VGV + ++ + G V+ QG L G+E ++S+ LRE+ ++ Sbjct: 19 VYQMHRVGVMSLLIITVSGLFIGLVLGLQGYSILVNVGSESMLGTMVSLTLLRELAPVVA 78 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+GSA+ AEIGSMK +E++ ++ +G+D ++ ++SPR+WA I+SLP+LT++ Sbjct: 79 ALLFAGRAGSALTAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAA 138 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAV 335 I+G +V + + F+S + ++ G+IK+ A +A+ +G+A Sbjct: 139 IGIVGGKLVGVDFLGVDEGSFWSGMQNNVQFGHDVVNGIIKSIVFALLCTWIAVFQGYAC 198 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361 + +T VV S V+ D Sbjct: 199 DPTPEGIATAMTRTVVYSSLCVLGFD 224 >gi|90408209|ref|ZP_01216376.1| hypothetical protein PCNPT3_11414 [Psychromonas sp. CNPT3] gi|90310655|gb|EAS38773.1| hypothetical protein PCNPT3_11414 [Psychromonas sp. CNPT3] Length = 259 Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 70/234 (29%), Positives = 134/234 (57%), Gaps = 3/234 (1%) Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198 T C +K K F L I Q++ +G+ +P+++ G V++ QG + L + AE Sbjct: 28 TRTLCVKPHK-KLFSL-FIVQIFQLGILSLPIILTAGLFIGMVLSLQGYYVLVAYAAEEN 85 Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258 ++++ LRE+G +++A++ AGR+GSA+ AEIG M+ E++ ++ MG+ ++ +++P Sbjct: 86 LGSMVALSLLRELGPVVSALLFAGRAGSALTAEIGLMQSTEQLASMEMMGVSPLKRVLAP 145 Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKA 317 R+ A +I+LP+LT+L N AI G ++ + I F+S + L +++ G+IK+ Sbjct: 146 RLLAGVITLPMLTLLFNVFAIWGGYLIGVHWMGIDAGSFWSVMQGSVDLFSDVGNGIIKS 205 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 A I VA+ G+ V ++ + + TT VV S +++ +D + +F F + Sbjct: 206 VIFALIITWVALYNGYYVIPNAQGISRSTTTTVVVSSLLILAMDFILTVFMFGM 259 >gi|220917185|ref|YP_002492489.1| protein of unknown function DUF140 [Anaeromyxobacter dehalogenans 2CP-1] gi|219955039|gb|ACL65423.1| protein of unknown function DUF140 [Anaeromyxobacter dehalogenans 2CP-1] Length = 251 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 66/230 (28%), Positives = 112/230 (48%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 G +I GE A +++ ++ QM ++G +V + G V Q + L Sbjct: 12 FGRMILFAGEIVAWAFRPPFRPDQILAQMAFIGAGSAFIVGVTGTFAGMVFGLQMNYALR 71 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 QF AE ++ + RE+ + TA+M+ GR+GSAI E+G+M++ E+IDA+ TM + Sbjct: 72 QFAAEGYTGGSTAFALARELSPVFTALMVTGRAGSAITTELGTMRVTEQIDAMETMAVSP 131 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 ++ L+ PR+ A I+ P+LT+L N GA ++ IP F +IF Sbjct: 132 IQYLVVPRVVASILMFPVLTMLFNALGYGGAYVMGVFVSGIPEGPFIQHTREFLGPNDIF 191 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 GL KA + ++ G+A + +G+ T VV S +++ D Sbjct: 192 HGLGKAVLFGYIVAVITTWRGYAASGGARGVGEGTTRAVVASSVAILVAD 241 >gi|197122403|ref|YP_002134354.1| hypothetical protein AnaeK_1997 [Anaeromyxobacter sp. K] gi|196172252|gb|ACG73225.1| protein of unknown function DUF140 [Anaeromyxobacter sp. K] Length = 251 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 66/230 (28%), Positives = 112/230 (48%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 G +I GE A +++ ++ QM ++G +V + G V Q + L Sbjct: 12 FGRMILFAGEIVAWAFRPPFRPDQILAQMAFIGAGSAFIVGVTGTFAGMVFGLQMNYALR 71 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 QF AE ++ + RE+ + TA+M+ GR+GSAI E+G+M++ E+IDA+ TM + Sbjct: 72 QFAAEGYTGGSTAFALARELSPVFTALMVTGRAGSAITTELGTMRVTEQIDAMETMAVSP 131 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 ++ L+ PR+ A I+ P+LT+L N GA ++ IP F +IF Sbjct: 132 IQYLVVPRVVASILMFPVLTMLFNALGYGGAYVMGVFVSGIPEGPFIQHTREFLGPDDIF 191 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 GL KA + ++ G+A + +G+ T VV S +++ D Sbjct: 192 HGLGKAVLFGYIVAVITTWRGYAASGGARGVGEGTTRAVVASSVAILVAD 241 >gi|209526324|ref|ZP_03274853.1| protein of unknown function DUF140 [Arthrospira maxima CS-328] gi|209493253|gb|EDZ93579.1| protein of unknown function DUF140 [Arthrospira maxima CS-328] Length = 261 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 63/215 (29%), Positives = 108/215 (50%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + QM VG + + +L + G V Q A + GA ++++ RE+ +LT Sbjct: 42 LEQMAIVGPESLFIALLTASFVGMVFTIQVAQEFITLGAGHLVGGILALSLSRELTPVLT 101 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 +V+IAGR SA AE+G+M++ E+IDA+ M D V L+ PR+ A + LPLLTI+ Sbjct: 102 SVIIAGRVCSAFAAELGTMRVTEQIDALYIMKTDPVDYLVIPRVLACSLMLPLLTIICLI 161 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + + G ++ +Y+IP +F L ++ + IK+ AI ++ G Sbjct: 162 TGLAGGLLIATSFYNIPSVLFLDSIRDLMGLWDLISAEIKSLVFGWAIAVIGTSWGLTTT 221 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 + +G+ TT VV S+ + I+D + F + Sbjct: 222 GGAKGVGQSTTTAVVTSLLAIFILDFFLSWLLFKV 256 >gi|86606727|ref|YP_475490.1| hypothetical protein CYA_2087 [Synechococcus sp. JA-3-3Ab] gi|86555269|gb|ABD00227.1| conserved hypothetical protein [Synechococcus sp. JA-3-3Ab] Length = 255 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 64/213 (30%), Positives = 111/213 (52%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + Q+ VG+ + +V++ + V V Q A + FGA +++I RE+ ++T Sbjct: 32 LEQLAAVGLESLLIVLITAVVISGVFTIQLAREFINFGASSLIGGVLAIALARELTPVVT 91 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV++AGR GSA AE+G+MK+ E+IDA+ + D V L+ PR+ A + LP+LTIL+ Sbjct: 92 AVILAGRVGSAFAAELGTMKVTEQIDALYLLRTDPVDYLVIPRVVAAGLMLPVLTILSLL 151 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + ++G I+ Y+IP VF + + ++ +KA I IV G + Sbjct: 152 TGLVGGMIICASVYNIPSTVFLTSAQNLLAPWDLIVCCLKAMVFGSLIAIVGSNWGLSTS 211 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+ T VV ++ V + + L + F Sbjct: 212 GGAKGVGRSTTDAVVTALLGVFVTNFLISWLAF 244 >gi|83647976|ref|YP_436411.1| organis solvents resistance ABC transporter permease [Hahella chejuensis KCTC 2396] gi|83636019|gb|ABC31986.1| ABC-type transport system involved in resistance to organic solvents, permease component [Hahella chejuensis KCTC 2396] Length = 259 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 63/215 (29%), Positives = 121/215 (56%), Gaps = 2/215 (0%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 + KGF L L++Q+Y VGV + ++++ G V+ QG L +G+E ++++ Sbjct: 35 RMKGFPL-LLKQLYSVGVLSLVIIVVSGLFIGMVLGLQGYNILVDYGSEQAIGQMIALTL 93 Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267 +RE+G ++TA++ AGR+GSA+ AEIG MK E++ ++ MG+D +R +I+PR+ A I++ Sbjct: 94 VRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMGVDPLRQIIAPRLLAGFIAM 153 Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGI 326 P+L ++ + + G +V ++ + F+S ++ + +I G+IK+ Sbjct: 154 PMLAMIFSVVGVWGGKMVGVEWLGVYEGSFWSNMQASVDFSDDILNGIIKSIVFGVVCTW 213 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 +A+ +G+ S + T VV S V+ +D Sbjct: 214 IAVFQGYDSVPTSEGISSATTKTVVYSSLAVLGLD 248 >gi|169632329|ref|YP_001706065.1| toluene tolerance efflux ABC transporter membrane protein [Acinetobacter baumannii SDF] gi|239503256|ref|ZP_04662566.1| toluene tolerance efflux ABC transporter membrane protein [Acinetobacter baumannii AB900] gi|260549862|ref|ZP_05824078.1| toluene tolerance efflux transporter [Acinetobacter sp. RUH2624] gi|169151121|emb|CAO99787.1| toluene tolerance efflux transporter (ABC superfamily, membrane) [Acinetobacter baumannii] gi|193078493|gb|ABO13499.2| toluene tolerance efflux transporter [Acinetobacter baumannii ATCC 17978] gi|260407112|gb|EEX00589.1| toluene tolerance efflux transporter [Acinetobacter sp. RUH2624] Length = 258 Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 60/198 (30%), Positives = 110/198 (55%), Gaps = 1/198 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + QM+ VGV + ++ + G V+ QG L G+E ++S+ LRE+ ++ Sbjct: 42 VYQMHRVGVMSLLIITVSGLFIGLVLGLQGYSILVNVGSESMLGTMVSLTLLRELAPVVA 101 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+GSA+ AEIGSMK +E++ ++ +G+D ++ ++SPR+WA I+SLP+LT++ Sbjct: 102 ALLFAGRAGSALTAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAA 161 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAV 335 I+G +V + + F+S + ++ G+IK+ A +A+ +G+A Sbjct: 162 IGIVGGKLVGVDFLGVDEGSFWSGMQNNVQFGHDVVNGIIKSIVFALLCTWIAVFQGYAC 221 Query: 336 GVHSNSLGKKVTTCVVQS 353 + +T VV S Sbjct: 222 DPTPEGIATAMTRTVVYS 239 >gi|56708629|ref|YP_170525.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110671100|ref|YP_667657.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis FSC198] gi|134301425|ref|YP_001121393.1| ABC-type transporter involved in resistance to organic solvents, permease protein [Francisella tularensis subsp. tularensis WY96-3418] gi|224457822|ref|ZP_03666295.1| ABC-type transporter involved in resistance to organic solvents, permease protein [Francisella tularensis subsp. tularensis MA00-2987] gi|254371262|ref|ZP_04987264.1| toluene ABC superfamily ATP binding cassette transporter [Francisella tularensis subsp. tularensis FSC033] gi|254875493|ref|ZP_05248203.1| toluene ABC superfamily ATP binding cassette transporter [Francisella tularensis subsp. tularensis MA00-2987] gi|56605121|emb|CAG46242.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110321433|emb|CAL09625.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis FSC198] gi|134049202|gb|ABO46273.1| ABC-type transporter involved in resistance to organic solvents, permease protein [Francisella tularensis subsp. tularensis WY96-3418] gi|151569502|gb|EDN35156.1| toluene ABC superfamily ATP binding cassette transporter [Francisella tularensis subsp. tularensis FSC033] gi|254841492|gb|EET19928.1| toluene ABC superfamily ATP binding cassette transporter [Francisella tularensis subsp. tularensis MA00-2987] gi|282159866|gb|ADA79257.1| ABC-type transporter involved in resistance to organic solvents, permease protein [Francisella tularensis subsp. tularensis NE061598] Length = 254 Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 60/195 (30%), Positives = 111/195 (56%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I Q+ VGV+ + +++ G V++ QG + LS+FGA ++++ LRE+G ++T Sbjct: 39 IIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGAHSLLGVMVALSVLRELGPVVT 98 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+ S+I +EIG MK ++I++++ M ++ + ++S R WA +IS P+L ++ Sbjct: 99 AMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFILSTRFWACMISGPILALIFAS 158 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 AI+ I+ I + F+S S+ ++I G+IK+ A +A+ +G+ Sbjct: 159 VAILAGFILAEAALGISYGEFWSNIQSSVIASDISNGIIKSIVFAFITAWIALYQGYYCI 218 Query: 337 VHSNSLGKKVTTCVV 351 SN + K T VV Sbjct: 219 PDSNGIAKATTKTVV 233 >gi|284929638|ref|YP_003422160.1| hypothetical protein UCYN_11070 [cyanobacterium UCYN-A] gi|284810082|gb|ADB95779.1| conserved hypothetical integral membrane protein [cyanobacterium UCYN-A] Length = 263 Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 62/205 (30%), Positives = 105/205 (51%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + QM VG + + ++ + G V Q A + FGA ++++ RE+ +LT Sbjct: 43 LEQMSVVGPESLTISMITAAFVGMVFTIQVAREFISFGAVSTVGGVLALALTRELAPVLT 102 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV++AGR GSA AEIG+M++ E++DA+ + D + L+ PR+ A + LP+L IL+ Sbjct: 103 AVVVAGRVGSAFAAEIGTMRVTEQVDALYMLKTDPISYLVVPRVLACCLMLPILNILSLI 162 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + + G ++ YDI VF + + ++ T IKA I ++ G Sbjct: 163 TGMAGGLLIANGLYDISVYVFLTSVRNFLEFWDLITSTIKAITFGGLIAVIGCSWGLTTS 222 Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361 + +G+ TT VV S+ V II+ Sbjct: 223 GGAKGVGQSTTTAVVTSLLAVFIIN 247 >gi|86158287|ref|YP_465072.1| ABC amino acid transporter, inner membrane subunit [Anaeromyxobacter dehalogenans 2CP-C] gi|85774798|gb|ABC81635.1| ABC amino acid transporter, inner membrane subunit [Anaeromyxobacter dehalogenans 2CP-C] Length = 251 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 65/229 (28%), Positives = 112/229 (48%) Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G +I GE A +++ ++ QM ++G +V + G V Q + L Q Sbjct: 13 GRMILFAGEIVAWAFRPPFRPDQILAQMAFIGAGSAFIVGVTGTFAGMVFGLQMNYALRQ 72 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 F AE ++ + RE+ + TA+M+ GR+GSAI E+G+M++ E+IDA+ TM + + Sbjct: 73 FAAEGYTGGSTAFALARELSPVFTALMVTGRAGSAITTELGTMRVTEQIDAMETMAVSPI 132 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 + L+ PR+ A I+ P+LT+L N GA ++ IP F +IF Sbjct: 133 QYLVVPRVLASILMFPVLTMLFNALGYGGAYVMGVFVSGIPEGPFIQHTREFLGPDDIFH 192 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 GL KA + ++ G++ + +G+ T VV S +++ D Sbjct: 193 GLGKAVLFGYIVAVITTWRGYSASGGARGVGEGTTRAVVASSVAILVAD 241 >gi|296117337|ref|ZP_06835927.1| hypothetical protein GXY_16012 [Gluconacetobacter hansenii ATCC 23769] gi|295976103|gb|EFG82891.1| hypothetical protein GXY_16012 [Gluconacetobacter hansenii ATCC 23769] Length = 433 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 70/220 (31%), Positives = 120/220 (54%), Gaps = 4/220 (1%) Query: 150 KGFL--LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 KG + + L+ + G + + +V +++F+ GA++A GA QL +F A+I+ L+ I Sbjct: 208 KGMMRTIDLMSDVRAAGPTALVIVGVVNFLVGAILAFVGAVQLHKFAADIYVASLVGIAM 267 Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267 +RE+ ++TA+++AGR+G A A I +M+ NEEIDA+ G+ LI P + ALI+++ Sbjct: 268 VREMSAVMTAIIMAGRTGGAYAARISTMQGNEEIDALTVFGIPVASYLILPSVLALILTM 327 Query: 268 PLLTILANFSAIIGASIVIWKYYDI-PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326 PLL + + G V + ++ P F ++ A L+ G IK+ IG+ Sbjct: 328 PLLYLYGCLIGMFGGFFVSYIMLNVTPLGYFHETLYAVA-LSQFVFGFIKSIVFGGFIGL 386 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + + G G + +G T VV I VI ID++FA+ Sbjct: 387 TSCRIGLKAGRSAADVGIAATRAVVVGIVGVIAIDAIFAV 426 >gi|284049033|ref|YP_003399372.1| protein of unknown function DUF140 [Acidaminococcus fermentans DSM 20731] gi|283953254|gb|ADB48057.1| protein of unknown function DUF140 [Acidaminococcus fermentans DSM 20731] Length = 260 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 76/259 (29%), Positives = 131/259 (50%), Gaps = 9/259 (3%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 +G+K+V D C++ G V++ E C ++ ++RQM +G +P+V + Sbjct: 10 VGRKMV----DLCART---GRVVNLFLEACRAAGTAD--RREVLRQMARLGADSLPIVSM 60 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 TG V++ Q A + +FGA +++I RE+ +LT V++AGR G+AI AEIG Sbjct: 61 TILCTGMVMSVQTAKEFVRFGAADSVGGIVAIAMGRELSPILTGVVVAGRIGAAIAAEIG 120 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 +MK+ E+IDA+R M + +R L++PR+ A+++ +P+L + AN +G V Y I Sbjct: 121 TMKVTEQIDALRVMAVSPIRFLVTPRLLAIVLMMPVLVVYANLVGDVGGWFVAENYAGIS 180 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 +F +I GLIK I + +G + +G T VV S Sbjct: 181 SHMFLESIRGFIEPWDIIGGLIKGAVFGAIIATIGCHKGLNAQQGAEGVGMATTKSVVLS 240 Query: 354 ISIVIIIDSLFAIFYFAIG 372 I ++ I + ++ + G Sbjct: 241 IILIFIANYFLSVILYVHG 259 >gi|153004838|ref|YP_001379163.1| hypothetical protein Anae109_1976 [Anaeromyxobacter sp. Fw109-5] gi|152028411|gb|ABS26179.1| protein of unknown function DUF140 [Anaeromyxobacter sp. Fw109-5] Length = 250 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 65/230 (28%), Positives = 114/230 (49%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG ++ GE + + L ++ QM ++GV +V + G V A Q F + Sbjct: 11 LGRMLMFAGEMVGWAVRPPFRLELVLAQMAFIGVGSAFIVGVTGTFAGMVFALQMNFAMK 70 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 QF AE + ++ RE+ + TA+M+ GRSGSAI E+G+M++ E+IDA+ +M ++ Sbjct: 71 QFAAEGYVGGSVAFSLARELSPVFTALMVTGRSGSAIATELGTMRVTEQIDAMESMAVNP 130 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 ++ L+ PR+ A +I P LT+L N G ++ IP + + + +I Sbjct: 131 IQYLVVPRVIASLIMFPFLTMLFNSLGYAGGFVMGVYVAGIPIGPYLAHTQEFMDVGDIL 190 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 GL KA + ++ G+A + +G+ T VV S +++ D Sbjct: 191 HGLFKAVVFGLIVSVITTWRGYAAFGGAKGVGEGTTRGVVASSITILLAD 240 >gi|284051975|ref|ZP_06382185.1| hypothetical protein AplaP_10931 [Arthrospira platensis str. Paraca] gi|291567910|dbj|BAI90182.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 261 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 63/215 (29%), Positives = 108/215 (50%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + QM VG + + +L + G V Q A + GA ++++ RE+ +LT Sbjct: 42 LEQMAIVGPESLFIALLTASFVGMVFTIQVAQEFIALGAGHLVGGVLALSLSRELTPVLT 101 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 +V+IAGR SA AE+G+M++ E+IDA+ M D V L+ PR+ A + LPLLTI+ Sbjct: 102 SVIIAGRVCSAFAAELGTMQVTEQIDALYMMKTDPVDYLVIPRVLACSLMLPLLTIICLI 161 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + + G ++ +Y+IP +F L ++ + IK+ AI ++ G Sbjct: 162 TGLAGGLLIATSFYNIPSVLFLDSIRDLMGLWDLISAEIKSVVFGWAIAVIGTSWGLTTT 221 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 + +G+ TT VV S+ + I+D + F + Sbjct: 222 GGAKGVGQSTTTAVVTSLLAIFILDFFLSWLLFKV 256 >gi|307153262|ref|YP_003888646.1| hypothetical protein Cyan7822_3422 [Cyanothece sp. PCC 7822] gi|306983490|gb|ADN15371.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7822] Length = 264 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 65/211 (30%), Positives = 110/211 (52%), Gaps = 8/211 (3%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ----FGAEIFSIDLM 203 K+K + + QM VG P + IS VT A + Q+S+ FGA + ++ Sbjct: 34 KYKIHRRNTLDQMAIVG----PESLTISLVTAAFVGMVFTIQVSREFIYFGAGSYVGGVL 89 Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263 S+ RE+ +LTAV++AGR GSA AEIG+M++ E+IDA+ + D + L+ PR+ A Sbjct: 90 SLALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQIDALHMLKTDPIDYLVIPRVLAC 149 Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323 + LP+LT+LA + I G + Y+I AVF + + ++ + ++K+ Sbjct: 150 SLMLPILTVLALLTGIAGGIAIADSLYNISPAVFLNSARNFLQTWDLVSCILKSAVFGSL 209 Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 I ++ G + +G+ TT VV ++ Sbjct: 210 IAVIGCSWGLTTSGGAKGVGQSTTTAVVTAL 240 >gi|299768645|ref|YP_003730671.1| toluene tolerance protein Ttg2B [Acinetobacter sp. DR1] gi|298698733|gb|ADI89298.1| toluene tolerance protein Ttg2B [Acinetobacter sp. DR1] Length = 259 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 77/253 (30%), Positives = 130/253 (51%), Gaps = 16/253 (6%) Query: 114 IGKKIVKFINDSCSQAHILGLVI---SNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170 +G+ +++ I + AH+L +I + G F Y QM+ VGV + + Sbjct: 7 LGRLVIERIRGIGAAAHMLLQIIFSLPSKGGFGRFGY-----------QMHRVGVMSLLI 55 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 + + GAV+ Q L FGAE +S+ LRE+ ++ A++ AGR+GSA+ A Sbjct: 56 ITVSGLFIGAVLGLQMYSILVTFGAESMLGTAISLTLLRELASVVAALLFAGRAGSALTA 115 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 EIGSMK +E++ ++ +G+D ++ ++SPR+WA I+SLP+LT++ IIG +V + Sbjct: 116 EIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIIGGKMVGVDFL 175 Query: 291 DIPFAVFFSRFHSTATLA-NIFTG-LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 F+S +T +I G +IK+ A VA+ +G+A + +T Sbjct: 176 GADEGSFWSGMQNTVRFGHDIINGTIIKSIVFALICTWVAVYQGYACDPTPEGIATAMTR 235 Query: 349 CVVQSISIVIIID 361 VV S V+ D Sbjct: 236 TVVYSSLCVLGFD 248 >gi|184159620|ref|YP_001847959.1| ABC transporter [Acinetobacter baumannii ACICU] gi|294842631|ref|ZP_06787314.1| ABC-type transport system [Acinetobacter sp. 6014059] gi|183211214|gb|ACC58612.1| ABC-type transport system [Acinetobacter baumannii ACICU] gi|322509530|gb|ADX04984.1| ttg2B [Acinetobacter baumannii 1656-2] gi|323519550|gb|ADX93931.1| ABC-type transport system [Acinetobacter baumannii TCDC-AB0715] Length = 258 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 60/198 (30%), Positives = 110/198 (55%), Gaps = 1/198 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + QM+ VGV + ++ + G V+ QG L G+E ++S+ LRE+ ++ Sbjct: 42 VYQMHRVGVMSLLIITVSGLFIGLVLGLQGYSILVNVGSESMLGTMVSLTLLRELAPVVA 101 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+GSA+ AEIGSMK +E++ ++ +G+D ++ ++SPR+WA I+SLP+LT++ Sbjct: 102 ALLFAGRAGSALTAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAA 161 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAV 335 I+G +V + + F+S + ++ G+IK+ A +A+ +G+A Sbjct: 162 IGIVGGKLVGVDFLGVDEGSFWSGMQNNVQFGHDVVNGIIKSIVFALLCTWIAVFQGYAC 221 Query: 336 GVHSNSLGKKVTTCVVQS 353 + +T VV S Sbjct: 222 EPTPEGIATAMTRTVVYS 239 >gi|67926111|ref|ZP_00519354.1| Protein of unknown function DUF140 [Crocosphaera watsonii WH 8501] gi|67852045|gb|EAM47561.1| Protein of unknown function DUF140 [Crocosphaera watsonii WH 8501] Length = 263 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 61/205 (29%), Positives = 107/205 (52%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + QM VG + + ++ + G V Q A + FGA ++++ RE+ +LT Sbjct: 43 LDQMSVVGPESLTIALITAGFVGMVFTIQVAREFISFGAASTVGGVLALALTRELAPVLT 102 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV++AGR GSA AEIG+M++ E+IDA+ + D V L+ PR+ A + LP+L IL+ Sbjct: 103 AVVVAGRVGSAFAAEIGTMRVTEQIDALYMLKTDPVDYLVVPRVLACCLMLPVLNILSLI 162 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + + G ++ YDI VF + + L ++ T +IK+ I ++ G Sbjct: 163 TGMTGGLLIANGLYDISPYVFLTSIRNFLELWDLVTSVIKSVAFGGLIAVIGCSWGLTTT 222 Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361 + +G+ TT VV ++ V +++ Sbjct: 223 GGAKGVGQSTTTAVVTALLAVFVVN 247 >gi|30250308|ref|NP_842378.1| hypothetical protein NE2383 [Nitrosomonas europaea ATCC 19718] gi|30181103|emb|CAD86295.1| Domain of unknown function DUF140 [Nitrosomonas europaea ATCC 19718] Length = 271 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 113/213 (53%), Gaps = 1/213 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 R++Y+ GV + ++++ G V+ QG L +FG+E L+++ +RE+G ++ A Sbjct: 55 REIYFAGVLSLIIILVSGLFVGMVLGLQGYETLQKFGSESAVGTLVALSLVRELGPVIAA 114 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ A R+GSA+ AEIG MK E++ A+ M +D + +++PR W + S+PLL + + Sbjct: 115 LLFASRAGSAMTAEIGLMKATEQLAAMGMMAVDPIARIVAPRFWGGVFSMPLLAAMFSVM 174 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + G +V + + F+S+ ++ +I G+IK+ F + +A+ EGF Sbjct: 175 GVFGGYLVTVVFIGVDEGSFWSQMQNSVDFRYDIVNGVIKSCFFGVVVTAIAVFEGFDAP 234 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + + T VV S ++ +D + F F Sbjct: 235 PTAEGVSGATTRTVVTSSLAILGLDFVLTAFMF 267 >gi|209964880|ref|YP_002297795.1| ABC transporter permease protein, putative [Rhodospirillum centenum SW] gi|209958346|gb|ACI98982.1| ABC transporter permease protein, putative [Rhodospirillum centenum SW] Length = 256 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 65/230 (28%), Positives = 118/230 (51%), Gaps = 34/230 (14%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE--IFSIDLMSILQLREIGVLL 215 RQM +G +PVV L + TG V+A Q S+F AE I ++ ++SI RE+G +L Sbjct: 44 RQMIDIGYYSLPVVGLTALFTGMVLALQSYSGFSRFEAESAIATVVVLSIT--RELGPVL 101 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 +M+AGR G+A+ AE+G+M++ E++DA+ T+ + + L+ PR+ A + LPLL ++A+ Sbjct: 102 AGLMVAGRIGAAMAAELGTMRVTEQVDALTTLSTNPFKYLVVPRLLAGTLMLPLLVLVAD 161 Query: 276 FSAIIGASIV---------------IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320 + G +V WKY ++ ++ +GL+KA Sbjct: 162 IIGVFGGFLVGVYRLNFNAGGYITSTWKYLEV---------------MDVVSGLVKAGAF 206 Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 AI ++ G+ + +G T VV + ++++++ L +F+ Sbjct: 207 GFAISLMGCYHGYHSRGGAQGVGAATTNAVVSASILILVLNYLLTGIFFS 256 >gi|253991145|ref|YP_003042501.1| hypothetical protein PAU_03671 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782595|emb|CAQ85759.1| conserved hypothetical Protein [Photorhabdus asymbiotica] Length = 262 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 70/221 (31%), Positives = 117/221 (52%), Gaps = 11/221 (4%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L +Q++ VGV + ++++ G V+ QG L+ + AE ++++ LRE+G ++ Sbjct: 46 LRQQLFSVGVQSLLIIVVSGLFIGMVLGLQGYLVLTTYSAEASLGMMVAVSLLRELGPVV 105 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E+I ++ M +D +R +I+PR WA IS+PLL+++ Sbjct: 106 TALLFAGRAGSALTAEIGLMKATEQISSLEMMAIDPLRRVIAPRFWAGFISMPLLSLIFV 165 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHST----ATLANIFTGLIKAPFMACAIGIVAM 329 I G ++ V WK D F F+S S L N F IK+ A + +A+ Sbjct: 166 AVGICGGAMVGVDWKGIDSGF--FWSSMQSAIEWQKDLLNCF---IKSVVFAITVTWIAL 220 Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+ S + + T VV + V+ +D + F Sbjct: 221 FNGYDAIPTSEGISQATTRTVVHASLAVLGLDFVLTALMFG 261 >gi|89093955|ref|ZP_01166900.1| probable permease of ABC transporter [Oceanospirillum sp. MED92] gi|89081841|gb|EAR61068.1| probable permease of ABC transporter [Oceanospirillum sp. MED92] Length = 259 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 59/207 (28%), Positives = 115/207 (55%), Gaps = 1/207 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y+VGV + ++++ G V+ QG L +G+E ++++ +RE+ ++ Sbjct: 42 LVQQIYFVGVLSLIIIVVSGLFIGMVLGLQGYTILVDYGSEQAVGQMVALSLVRELAPVV 101 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ +G+D +R +I+PR WA I LP+L+ + Sbjct: 102 TALLFAGRAGSALTAEIGLMKATEQLSSLEMIGVDPLRRIIAPRFWAGFICLPILSAIFA 161 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334 + G ++V + I F++ ++ ++ GL+KA + +A+ +G+ Sbjct: 162 IVGVYGGALVSIDWLGIYDGSFWANMQNSVNFYEDVMNGLVKAVVFGFVVTWIAVFQGYD 221 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIID 361 S + + T VV S V+ +D Sbjct: 222 CIPTSEGISQATTKTVVYSSLAVLGLD 248 >gi|296532300|ref|ZP_06895039.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] gi|296267376|gb|EFH13262.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] Length = 261 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 61/215 (28%), Positives = 117/215 (54%), Gaps = 4/215 (1%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE--IFSIDLMSILQLREIGVL 214 +R +G +PVV L + TG V+A Q S+FGAE I ++ ++SI RE+G + Sbjct: 47 LRAFVEIGYFSLPVVSLTAIFTGMVLALQSYSGFSRFGAESAIANVVVLSIT--RELGPV 104 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 L +M+AGR G+A AEIG+M++ ++IDA+ T+ + ++ L++PR+ A +++PLL ++A Sbjct: 105 LAGLMVAGRIGAAFAAEIGTMRVTDQIDALTTLSTNPMKYLVAPRLLAGTLAMPLLVVVA 164 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 + ++G ++ A + + + ++ +GL+KA I ++ G+ Sbjct: 165 DILGVMGGWLIGTAQLGFTSASYLTSTLNFVQPMDVISGLVKAAVFGFTITLMGCYSGYN 224 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G T VV S +++ +D + +F Sbjct: 225 SRGGAQGVGAATTRAVVASSILILALDYILTAMFF 259 >gi|291279509|ref|YP_003496344.1| ABC transporter permease [Deferribacter desulfuricans SSM1] gi|290754211|dbj|BAI80588.1| ABC transporter, permease [Deferribacter desulfuricans SSM1] Length = 256 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 68/214 (31%), Positives = 119/214 (55%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L +QM ++GV+ + V+IL TG V A Q +FGAE ++ + RE+G +L Sbjct: 43 LFKQMEFIGVNSLSVIILTGTFTGMVFAFQSYIGFHRFGAEYMVGTVVGLGMARELGPVL 102 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 +++M+A R+GSAI AEIG+M++ E+IDA+ + ++ V+ L+ PR+ A +I +P+L I+A Sbjct: 103 SSIMVAARAGSAIAAEIGTMRVTEQIDALYALAVEPVQYLVVPRMLAGVIVMPILNIIAV 162 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 F ++G V + I ++ + +I+ G+IKA + +V +GF Sbjct: 163 FCGVVGGYFVGVEILGINKTLYLEYMYRYVDFDDIYNGIIKATVFGLILTLVGCYKGFYT 222 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +GK T VV S ++++ D + F F Sbjct: 223 SGGAEGVGKSTTESVVLSSVLILVFDYILTAFMF 256 >gi|289806792|ref|ZP_06537421.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 212 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 70/213 (32%), Positives = 113/213 (53%), Gaps = 5/213 (2%) Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 Y VGV + ++I+ G V+ QG L+ + AE L+++ LRE+G ++ A++ Sbjct: 1 YNVGVLSMLIIIVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLF 60 Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280 AGR+GSA+ AEIG M+ E++ ++ M +D +R +ISPR WA +ISLPLLTI+ I Sbjct: 61 AGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIW 120 Query: 281 GASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 G S+ V WK D F F+S + ++ LIK+ A + +A+ G+ Sbjct: 121 GGSLVGVSWKGIDAGF--FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWIALFNGYDAIP 178 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 179 TSAGISRATTRTVVHASLAVLGLDFVLTALMFG 211 >gi|149918249|ref|ZP_01906741.1| putative ABC transporter, permease protein [Plesiocystis pacifica SIR-1] gi|149821009|gb|EDM80416.1| putative ABC transporter, permease protein [Plesiocystis pacifica SIR-1] Length = 273 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 66/230 (28%), Positives = 117/230 (50%), Gaps = 3/230 (1%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G+ A + L + Q+ +G+ +PV ++S G ++A Q L+ FGA S Sbjct: 42 GQAMARGPRRPWGLFDISYQILQLGIRSIPVTTMMSIFVGMILAWQFGEALADFGAT-NS 100 Query: 200 IDLMSILQL-REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258 I ++ L L RE+ L AV + + + + AE+GSMK+ E+IDAI +G D ++ L+ P Sbjct: 101 IGYVTSLALVRELVPTLLAVTVGTKMATGMTAELGSMKVTEQIDAIAALGADPIKKLVWP 160 Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318 R+ A +++PLL N A++G ++ +DIP F++ + + KA Sbjct: 161 RLVAACVAMPLLVAWGNVIAMLGGMLISEAVFDIPAGYFYNSYIDELEPIHYVMSQTKAL 220 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID-SLFAIF 367 GI+ +GF+ + ++G+ T V+ +V+I D +L A+F Sbjct: 221 VFGALAGIIGCYQGFSTKFGTEAVGQSTTETVIAVSVLVLIADFALTALF 270 >gi|39996027|ref|NP_951978.1| ABC transporter permease [Geobacter sulfurreducens PCA] gi|39982792|gb|AAR34251.1| ABC transporter, permease protein, putative [Geobacter sulfurreducens PCA] Length = 256 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 52/173 (30%), Positives = 101/173 (58%), Gaps = 2/173 (1%) Query: 147 YKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206 ++ G+ + Q +GV + ++ L TG V+A Q QL F A + ++++ Sbjct: 32 FRRPGYYREFVIQFDKMGVGSLFIICLTGLFTGMVMALQALIQLKPFAATSYVGGMVAVT 91 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 ++E+G +L+++M+AGR GS+I AE+G+M + E++DA+R G D V L++ R+ AL+++ Sbjct: 92 MVKELGPVLSSLMVAGRVGSSITAELGTMVVTEQVDAMRVEGTDIVSRLVTSRLKALMLA 151 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319 +P+L ++ + A++G I I YDI +++ ++ G++K PF Sbjct: 152 MPMLALVTDAVALLGGYI-IAAGYDINLLMYWKSLPQFMVFQDLIEGVMK-PF 202 >gi|317403202|gb|EFV83724.1| membrane protein [Achromobacter xylosoxidans C54] Length = 262 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 61/215 (28%), Positives = 116/215 (53%), Gaps = 3/215 (1%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLT 216 +Q++++G + ++ + G V+ QG + L+++GAE S+ L+ L L RE+G ++T Sbjct: 48 QQIHFIGNYSLLIIAVSGMFVGFVLGLQGYYTLNRYGAE-ESLGLLVALSLVRELGPVVT 106 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+G+++ AEIG MK E++ A+ M +D +R ++ PR+W II++P+L + + Sbjct: 107 ALLFAGRAGTSLTAEIGLMKAGEQLSAMEVMAVDPMRRVLVPRLWGGIIAMPILAAVFSM 166 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFAV 335 I+G +V + F+S+ + N + G+IK+ + +VA+ EG+ Sbjct: 167 VGILGGWVVGVLMIGVDAGAFWSQMQGGVDVWNDVVNGVIKSLVFGVTVTLVALYEGWQA 226 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV V+ +D L F Sbjct: 227 KPTPEGVARATTRTVVVGSLAVLGLDFLLTALMFG 261 >gi|34558257|ref|NP_908072.1| ABC transporter permease [Wolinella succinogenes DSM 1740] gi|34483976|emb|CAE10972.1| ABC TRANSPORTER, PERMEASE PROTEIN [Wolinella succinogenes] Length = 268 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 69/213 (32%), Positives = 109/213 (51%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 QM +GV V++L S TG V+A Q QFGAE F + + RE+G + A+ Sbjct: 54 QMESIGVGSFWVIVLTSVFTGMVLAIQFYQGFHQFGAENFMSYPIFLAITRELGPVFAAL 113 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 M+ R+ SA+ AE+G+M++ E+IDAI T+ +D R LI PRI A +SLPLL IL NF Sbjct: 114 MLTSRAISAMAAELGTMRVTEQIDAIDTLAIDSKRYLIVPRILASTLSLPLLVILFNFIG 173 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 + A + + + S L+++ L+KA + +V G+ Sbjct: 174 NLSAYFISIHVLGVNEESYRSIVRQYLELSDLVISLVKAFVFGYLVSLVGTYIGYNTRGG 233 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 + +G+ T+ VV S + + L + F+ A+ Sbjct: 234 ARGVGRSTTSAVVFSAVTIFGANYLLSAFFLAM 266 >gi|302338250|ref|YP_003803456.1| protein of unknown function DUF140 [Spirochaeta smaragdinae DSM 11293] gi|301635435|gb|ADK80862.1| protein of unknown function DUF140 [Spirochaeta smaragdinae DSM 11293] Length = 258 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/214 (30%), Positives = 108/214 (50%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+ Q+ + GV + V+ LI+ + G VI G L QFG ++ + +RE+G LL Sbjct: 44 LVMQLLFTGVEALGVISLIALILGGVIIVYGVDLLPQFGQGELIYSILITVIMRELGPLL 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A +I RSG+AI E+G M ++ +I+A ++G+D + L+ PR +I S+ LL I N Sbjct: 104 CAFIIIARSGTAIATELGQMVVSHQIEAYTSVGVDPISYLVVPRFLGVIFSMILLNIYFN 163 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 +I + V IP + + +I + +IK+ I + A GF V Sbjct: 164 LFGLIASFFVTSFIQPIPMRDYMYDLITHIRSVDIVSSMIKSLIFGAIIALSATYNGFRV 223 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 S + + V VVQS ++I+ D+L + Y+ Sbjct: 224 EQSSTEVPQVVIKAVVQSFVLIIVADALITLIYY 257 >gi|85058184|ref|YP_453886.1| hypothetical protein SG0206 [Sodalis glossinidius str. 'morsitans'] gi|84778704|dbj|BAE73481.1| conserved hypothetical protein [Sodalis glossinidius str. 'morsitans'] Length = 260 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 63/216 (29%), Positives = 116/216 (53%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++++Y VGV + ++++ G V+ QG L+ + AE L+++ LRE+G ++ Sbjct: 44 LVKKLYGVGVLSLVIIMVSGLFIGMVLGLQGYIILTTYSAESSLGMLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +++PR WA +IS+PLLT + Sbjct: 104 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLTAIFV 163 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334 I G ++V ++ I F+S ++ +IK+ A + +A+ G+ Sbjct: 164 AVGIWGGAVVGVEWKGIDSGFFWSAMQGAVDWRQDLVNCVIKSVVFAITVTWIALFNGYD 223 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + V+ +D + F Sbjct: 224 AIPTSEGISRATTRTVVHASLAVLGLDFVLTALMFG 259 >gi|261415153|ref|YP_003248836.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371609|gb|ACX74354.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp. succinogenes S85] gi|302325884|gb|ADL25085.1| putative ABC transporter, permease protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 260 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/214 (30%), Positives = 111/214 (51%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 ++++M VGVS +P++ + S TG V F+ ++ F + L E+G LL Sbjct: 46 IVKEMISVGVSSLPLLFVTSIFTGMVATIMAEFEFHNLVSDKFVGTAACKMVLIELGPLL 105 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++++GR GSA+ AE+GSMK EE+ A +GLD R L PR +A + +P LT ++N Sbjct: 106 TAIVLSGRVGSAVAAELGSMKEKEELSAYVVLGLDPYRYLAMPRFFAFLTMIPCLTAISN 165 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 A+IG IV DI + + + +++ G+IK+ I ++A G Sbjct: 166 ALALIGGWIVCVLALDITTYTYSTGMQYLFSNMDLWAGIIKSIVFGTIIFVLAYYHGTHS 225 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 ++ +G + VV S ++++ D + F F Sbjct: 226 KPGAHGVGLATMSVVVASCLMILVSDFILDAFMF 259 >gi|152996434|ref|YP_001341269.1| hypothetical protein Mmwyl1_2412 [Marinomonas sp. MWYL1] gi|150837358|gb|ABR71334.1| protein of unknown function DUF140 [Marinomonas sp. MWYL1] Length = 260 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 68/215 (31%), Positives = 124/215 (57%), Gaps = 1/215 (0%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 +FK + L++Q+Y VGV + ++I+ G V++ QG L++FG+E L+++ Sbjct: 35 RFKESVNLLVKQLYSVGVLSLVIIIVSGAFIGMVLSLQGYSILAKFGSEEAVGQLLALSL 94 Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267 LRE+ ++TA++ AGR+GS++ AEIG MK E++ + MG+D +R +I+PR A +I L Sbjct: 95 LRELSPVVTALLFAGRAGSSLTAEIGLMKATEQLSSFEMMGVDPLRRVIAPRFIAGVICL 154 Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGI 326 P+L+++ + S I+G +V ++ + F+S + +I GLIKA + + Sbjct: 155 PILSLIFSASGILGGHLVSVQWLGVYDGAFWSSMQQSVYFDTDIMNGLIKALCFSVVVTW 214 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 +A+ +G+ S +GK T VV ++ +D Sbjct: 215 IAVYQGYECVPTSEGIGKATTRTVVLGSLAILALD 249 >gi|86609938|ref|YP_478700.1| hypothetical protein CYB_2505 [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558480|gb|ABD03437.1| putative membrane protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 252 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 111/211 (52%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 Q+ VG+ + +V++ + V V Q A + FGA +++I RE+ ++TAV Sbjct: 31 QLSAVGLESLLIVLITAVVISGVFTIQLAREFINFGASSLIGGVLAIALARELTPVVTAV 90 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++AGR GSA AE+G+MK+ E+IDA+ + D V L+ PR+ A + LP+LTIL+ + Sbjct: 91 ILAGRVGSAFAAELGTMKVTEQIDALLLLRTDPVDYLVIPRVLAAGLMLPVLTILSLLTG 150 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 ++G I+ Y+I AVF + + + ++ +KA I IV G + Sbjct: 151 LVGGMIICASAYNISPAVFLNSAQTLLSSWDLLVCCLKAMVFGSLIAIVGSNWGLSTSGG 210 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+ T VV ++ V + + L + F Sbjct: 211 AKGVGRSTTDAVVTALLGVFVTNFLISWLLF 241 >gi|257092255|ref|YP_003165896.1| hypothetical protein CAP2UW1_0620 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044779|gb|ACV33967.1| protein of unknown function DUF140 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 271 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/215 (26%), Positives = 121/215 (56%), Gaps = 3/215 (1%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG-AEIFSIDLMSILQLREIGVLL 215 IR++YY G + ++++ G V+ QG L ++G A+ I L+++ +RE+G ++ Sbjct: 54 IREIYYSGFQSLLIIMVSGLFIGMVLGMQGYETLQRYGSADALGI-LVALSLVRELGPVV 112 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ A R+GS+I AEIG MK E++ A+ M ++ + +++PR W +IS+PLL L + Sbjct: 113 AALLFASRAGSSITAEIGLMKATEQLTAMDMMAVNPIARVVAPRFWGGVISMPLLAALFS 172 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 + + G ++ + + F+S+ ++ +I++G++K+ A+ ++A+ EG+ Sbjct: 173 ATGVFGGYLIGVVFIGVDDGAFWSQMQASVDFRYDIWSGIVKSFVFGVAVSLIAVFEGYD 232 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + + + + VV+S ++ +D + F F Sbjct: 233 ALPTAEGVSSSIKSTVVKSALAILALDFVLTSFMF 267 >gi|302340503|ref|YP_003805709.1| protein of unknown function DUF140 [Spirochaeta smaragdinae DSM 11293] gi|301637688|gb|ADK83115.1| protein of unknown function DUF140 [Spirochaeta smaragdinae DSM 11293] Length = 253 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 110/206 (53%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 ++ Q ++GV V ++ L S G + + Q ++ F AE +++ RE+ + Sbjct: 36 VLEQAEHIGVDSVLIIALSSLSIGMIFSLQVTDLMAMFRAETMVGSAVAMTMGRELAPVF 95 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 T++M+ ++GSA+ AEIG+M+++E+IDA+ TM ++ ++ L+ PRI II P+LT L+N Sbjct: 96 TSLMLVAKNGSAMAAEIGTMRVSEQIDAMETMSVNPIQYLVVPRIIGSIIVFPILTALSN 155 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 ++G+ +V + A + + + +I++G IKA M + ++ GF Sbjct: 156 VVGVLGSYVVSIHMKGVDPAGYLDQLYRFVDPVDIWSGFIKAAIMGALVSLICCFFGFTT 215 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361 S +G T VV + V++ D Sbjct: 216 SGGSKEVGTASTKAVVTASVAVLVSD 241 >gi|315185558|gb|EFU19327.1| protein of unknown function DUF140 [Spirochaeta thermophila DSM 6578] Length = 263 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 106/214 (49%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+ Q+ + GV + V+ L++ GA+I QG L QFG ++ + RE+G +L Sbjct: 49 LVLQILFTGVEALNVIALLALGIGALIIIQGVSLLPQFGQGDLVYPILIAVITRELGPIL 108 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA ++ RSG+AI EIG+M ++ EI+A G+D + L+ PR I+++ LL + N Sbjct: 109 TAFIVTARSGTAIATEIGTMVVSHEIEAYMAFGIDPISYLVVPRFLGAIVAVTLLNVYFN 168 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 ++G+ V + I FA +F +I + L+K+ I +V GF V Sbjct: 169 IFGLLGSFFVTSLIHPIQFAEYFHNLLLRLKPVDILSSLVKSATFGAVIALVGTYSGFQV 228 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 S + + V + I+ D+L + Y+ Sbjct: 229 ERASTEIPQVAIKAVGKGFVYCIVADALLTLVYY 262 >gi|307718422|ref|YP_003873954.1| transporter [Spirochaeta thermophila DSM 6192] gi|306532147|gb|ADN01681.1| putative transporter [Spirochaeta thermophila DSM 6192] Length = 263 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 106/214 (49%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+ Q+ + GV + V+ L++ GA+I QG L QFG ++ + RE+G +L Sbjct: 49 LVLQILFTGVEALNVIALLALGIGALIIIQGVSLLPQFGQGDLVYPILIAVITRELGPIL 108 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA ++ RSG+AI EIG+M ++ EI+A G+D + L+ PR I+++ LL + N Sbjct: 109 TAFIVTARSGTAIATEIGTMVVSHEIEAYMAFGIDPISYLVVPRFLGAIVAVTLLNVYFN 168 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 ++G+ V + I FA +F +I + L+K+ I +V GF V Sbjct: 169 IFGLLGSFFVTSLIHPIQFAEYFHNLLLRLKPVDILSSLVKSATFGAVIALVGTYSGFQV 228 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 S + + V + I+ D+L + Y+ Sbjct: 229 ERASTEIPQVAIKAVGKGFVYCIVADALLTLVYY 262 >gi|56751145|ref|YP_171846.1| putative ABC transporter permease [Synechococcus elongatus PCC 6301] gi|81299189|ref|YP_399397.1| hypothetical protein Synpcc7942_0378 [Synechococcus elongatus PCC 7942] gi|56686104|dbj|BAD79326.1| putative ABC transporter permease protein [Synechococcus elongatus PCC 6301] gi|81168070|gb|ABB56410.1| Protein of unknown function DUF140 [Synechococcus elongatus PCC 7942] Length = 264 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 61/213 (28%), Positives = 104/213 (48%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 QM VG S + + +L GAV Q A + FGA ++++ RE+ +LT Sbjct: 42 EQMANVGPSSLLITLLTGVSVGAVFTIQVAREFINFGAGNIVGGILALALFRELAPVLTG 101 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 V++AGR GSA AEIG+M++ E+IDA+ + D V L+ PR A + +P+L + Sbjct: 102 VVVAGRIGSAFAAEIGTMQVTEQIDALLMLRTDPVDYLVVPRTLACCLMMPILCLGFGLI 161 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 + S+V Y IP +VFF + ++ + LIKA + + G Sbjct: 162 GVTAGSLVAQSAYGIPVSVFFDGIRNFLEPWDVVSSLIKAVIFGWVVAAIGTNWGLTTTG 221 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +G+ T VV ++ ++ ++D + F+ Sbjct: 222 GARGVGESTTGAVVTALLVIFVLDFFLSQLMFS 254 >gi|171462919|ref|YP_001797032.1| protein of unknown function DUF140 [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192457|gb|ACB43418.1| protein of unknown function DUF140 [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 262 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 68/227 (29%), Positives = 121/227 (53%), Gaps = 7/227 (3%) Query: 150 KGFLLS----LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 GFLL +I Q+ +VG ++ + G V+ QG + L+++G+E ++ L+ Sbjct: 36 SGFLLKRPRLVIDQILFVGNHSFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQ-ALGLLVA 94 Query: 206 LQL-REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264 L L RE+G ++TA++ AGR+G+++ AEIG MK E++ A+ M +D + +I+PR+WA I Sbjct: 95 LSLTRELGPVITALLFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVDPLGRVIAPRLWAGI 154 Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACA 323 IS+P+L + I+G +V + F+S+ L ++ GLIK+ A Sbjct: 155 ISMPILATIFTAVGILGGYLVGVPLIGVDSGAFWSQMQGGVDLFSDTGNGLIKSMVYGVA 214 Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +A+ +G+ + + T VV S V+ +D L F+ Sbjct: 215 VTFIALYQGYESRPTPEGVSQATTRTVVISSLSVLALDFLLTAMMFS 261 >gi|33594617|ref|NP_882261.1| hypothetical protein BP3758 [Bordetella pertussis Tohama I] gi|33564693|emb|CAE44015.1| putative membrane protein [Bordetella pertussis Tohama I] Length = 261 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 58/214 (27%), Positives = 116/214 (54%), Gaps = 1/214 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q++++G + ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA Sbjct: 47 QQVHFIGNYSLLIIAVSGLFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTA 106 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+++ AEIG MK E++ A+ M +D +R ++ PR W II++P+L + + Sbjct: 107 LLFAGRAGTSLTAEIGLMKAGEQLSAMEVMAVDPMRRVLVPRFWGGIIAMPVLAAVFSMV 166 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTA-TLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 I+G IV + F+S+ + L ++ G+IK+ + +VA+ EG+ Sbjct: 167 GILGGWIVGVLMIGVDAGAFWSQMQNGVDVLDDVLNGVIKSLVFGVTVTLVALYEGWQAR 226 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +G+ T VV V+ +D + F Sbjct: 227 PTPEGVGRATTRTVVVGSLAVLGLDFILTALMFG 260 >gi|307824571|ref|ZP_07654796.1| protein of unknown function DUF140 [Methylobacter tundripaludum SV96] gi|307734555|gb|EFO05407.1| protein of unknown function DUF140 [Methylobacter tundripaludum SV96] Length = 260 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 66/217 (30%), Positives = 112/217 (51%), Gaps = 3/217 (1%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 L+ QM+ +GV ++ + G V+ QG + LS FGAE S+ +M L RE+G + Sbjct: 43 LLNQMHSIGVLSFLIITISGLFVGMVLGLQGYYTLSDFGAEE-SLGVMVAASLVRELGPV 101 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 ++A++ AGR+GSA+ AEIG MK E++ + M +D ++ +ISPR A +S+PLL L Sbjct: 102 VSALLFAGRAGSALTAEIGLMKATEQLSGMEMMAVDPIKRIISPRFLAGFLSMPLLAALF 161 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGF 333 + IIG +V + ++S+ + +I G+IK+ +A+ EG+ Sbjct: 162 SAVGIIGGQLVGSGLLGVDEGAYWSQMQAKLDFQDDIINGVIKSIVFGFVASWIALFEGY 221 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV S ++ +D + F Sbjct: 222 DAIPTSEGVSRATTRTVVNSAFSILGLDFILTTLMFG 258 >gi|171322154|ref|ZP_02911012.1| protein of unknown function DUF140 [Burkholderia ambifaria MEX-5] gi|171092530|gb|EDT37852.1| protein of unknown function DUF140 [Burkholderia ambifaria MEX-5] Length = 255 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/214 (27%), Positives = 118/214 (55%), Gaps = 1/214 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q++++G ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA Sbjct: 42 KQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 101 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+++ AEIG MK E++ A+ M +D V+ +I+PR+WA II++PLL + N Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPVKTVIAPRLWAGIIAMPLLAAIFNAV 161 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 ++G V + F+S+ + A++ G+IK+ A+ +A+ +G+ Sbjct: 162 GVLGGYFVGVVLIGVDPGAFWSQMQGGVQVWADVGNGVIKSIVFGFAVTFIALFQGYEAK 221 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D L F+ Sbjct: 222 PTPEGVSRATTKTVVFASLAVLGLDFLLTALMFS 255 >gi|170695754|ref|ZP_02886896.1| protein of unknown function DUF140 [Burkholderia graminis C4D1M] gi|170139359|gb|EDT07545.1| protein of unknown function DUF140 [Burkholderia graminis C4D1M] Length = 259 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 58/214 (27%), Positives = 119/214 (55%), Gaps = 1/214 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q+++VG + ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA Sbjct: 46 KQIHFVGNYSLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 105 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+++ AEIG MK E++ A+ M +D V+++++PR+WA IIS+P+L + + Sbjct: 106 LLFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVDPVKVVVAPRLWAGIISMPILAAIFSAV 165 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 I G +V + F+S+ + ++ G++K+ A+ VA+ +G+ Sbjct: 166 GIAGGYVVGVLLIGVDAGAFWSQMQGGVDVWRDVGAGVVKSVVFGLAVTFVALFQGYEAR 225 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D L F+ Sbjct: 226 PTPEGVSRATTKTVVYASLAVLGLDFLLTALMFS 259 >gi|196228069|ref|ZP_03126936.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428] gi|196227472|gb|EDY21975.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428] Length = 260 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 110/212 (51%), Gaps = 1/212 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 ++RQ+ VG VV++ TGAV+A Q FQ S+ G + ++++ RE+ +L Sbjct: 40 VLRQIVEVGWRSQMVVVVTGGFTGAVLAAQAYFQFSRLGMKSAVGSMVAVSMFRELAPVL 99 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 T +M++GR G+AI AEIG+MK+ E+IDA+R++G+ L+ PR+ AL+ S+PLL Sbjct: 100 TGLMVSGRVGAAIAAEIGTMKVTEQIDALRSLGVHPTDYLVVPRVLALLFSMPLLVAECC 159 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 +++ ++ DI A + A ++ L K I +A +G Sbjct: 160 AVSVLAGYVLGVHVLDISAAYYVRNMLLYAGPRDLKMALTKGLVFGIVIVFIACHQGLKT 219 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + +G+ T VV S+ ++I + F F Sbjct: 220 SNGAVGVGRAPTEAVVNG-SLAVLILNFFLTF 250 >gi|33598744|ref|NP_886387.1| hypothetical protein BPP4258 [Bordetella parapertussis 12822] gi|33603818|ref|NP_891378.1| hypothetical protein BB4845 [Bordetella bronchiseptica RB50] gi|33574874|emb|CAE39537.1| putative membrane protein [Bordetella parapertussis] gi|33577943|emb|CAE35208.1| putative membrane protein [Bordetella bronchiseptica RB50] Length = 261 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 58/214 (27%), Positives = 116/214 (54%), Gaps = 1/214 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q++++G + ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA Sbjct: 47 QQVHFIGNYSLLIIAVSGLFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTA 106 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+++ AEIG MK E++ A+ M +D +R ++ PR W II++P+L + + Sbjct: 107 LLFAGRAGTSLTAEIGLMKAGEQLSAMEVMAVDPMRRVLVPRFWGGIIAMPVLAAVFSMV 166 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTA-TLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 I+G IV + F+S+ + L ++ G+IK+ + +VA+ EG+ Sbjct: 167 GILGGWIVGVLMIGVDAGAFWSQMQNGVDVLDDVLNGVIKSLVFGVTVTLVALYEGWQAR 226 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +G+ T VV V+ +D + F Sbjct: 227 PTPEGVGRATTRTVVVGSLAVLGLDFILTALMFG 260 >gi|258592962|emb|CBE69271.1| toluene transporter subunit: membrane component of ABC superfamily [NC10 bacterium 'Dutch sediment'] Length = 256 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 69/235 (29%), Positives = 126/235 (53%), Gaps = 9/235 (3%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCA-SSYKFKGFLLSLIRQMYYVGVSGVPVVI 172 +G+ ++K + A LG +TG + KF+ ++ Q+Y++GV +++ Sbjct: 8 VGRTVLKQVRMMGHMAIFLG----STGLWAVLPPLKFR----RIVSQIYFIGVKSSSIIL 59 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 L + +G V+ QG + L +FG+E + + +RE+G ++ A+M+A R+GSA AEI Sbjct: 60 LTAAFSGMVLGLQGYYTLRKFGSEALLGPAVGLSLIRELGPVMAALMVAARAGSASAAEI 119 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 G M+I E+IDA+ M ++ V+ L+ P++ A +IS+PLLT + + I G +V K + Sbjct: 120 GIMRITEQIDALEAMAVNPVKHLVVPKVVAGLISVPLLTAIFDVVGIFGGYLVGVKMLGV 179 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 +FS + +++I G +K+ + V +GF G + +GK T Sbjct: 180 GAGTYFSEMRNMVEMSDIQGGFLKSLSFGLIVTWVCTYKGFYTGYGAEGVGKATT 234 >gi|186477517|ref|YP_001858987.1| hypothetical protein Bphy_2769 [Burkholderia phymatum STM815] gi|184193976|gb|ACC71941.1| protein of unknown function DUF140 [Burkholderia phymatum STM815] Length = 255 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 57/214 (26%), Positives = 119/214 (55%), Gaps = 1/214 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q+++VG + ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA Sbjct: 42 KQIHFVGNYSLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 101 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+++ AEIG MK E++ A+ M +D ++++++PR+WA II++P+L + + Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVDPLKVVVAPRMWAGIIAMPVLAAIFSAV 161 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTA-TLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 +IG IV + F+S+ ++ G+IK+ A+ +A+ +G+ Sbjct: 162 GVIGGYIVGVLMIGVDAGAFWSQMQGGVDAYRDVGNGVIKSIVFGFAVTFIALYQGYEAK 221 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D L F+ Sbjct: 222 PTPEGVSRATTKTVVYASLAVLGLDFLLTALMFS 255 >gi|115350388|ref|YP_772227.1| hypothetical protein Bamb_0333 [Burkholderia ambifaria AMMD] gi|172059407|ref|YP_001807059.1| hypothetical protein BamMC406_0342 [Burkholderia ambifaria MC40-6] gi|115280376|gb|ABI85893.1| protein of unknown function DUF140 [Burkholderia ambifaria AMMD] gi|171991924|gb|ACB62843.1| protein of unknown function DUF140 [Burkholderia ambifaria MC40-6] Length = 255 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 58/214 (27%), Positives = 118/214 (55%), Gaps = 1/214 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q++++G ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA Sbjct: 42 KQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 101 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+++ AEIG MK E++ A+ M +D ++ +I+PR+WA II++PLL + N Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPIKTVIAPRLWAGIIAMPLLAAIFNAV 161 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 ++G V + F+S+ + A++ G+IK+ A+ +A+ +G+ Sbjct: 162 GVLGGYFVGVVLIGVDPGAFWSQMQGGVQVWADVGNGVIKSIVFGFAVTFIALFQGYEAK 221 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D L F+ Sbjct: 222 PTPEGVSRATTKTVVFASLAVLGLDFLLTALMFS 255 >gi|328952205|ref|YP_004369539.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM 11109] gi|328452529|gb|AEB08358.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM 11109] Length = 255 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 71/257 (27%), Positives = 129/257 (50%), Gaps = 9/257 (3%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVSGVPVVI 172 +G+ V F+ + A L+++ G + Y+++ F RQ+ ++GV +V+ Sbjct: 7 LGRLWVHFLQELGGMA----LLLAQAGLWLPRRPYRWRHFF----RQLEFIGVKSFFIVV 58 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 L TG V+A Q + +FG E +++ RE+G +LT++M+A R+GSA+ AE+ Sbjct: 59 LTGLFTGMVLALQAYYGFRKFGGESLLGGAVALSMTRELGPVLTSLMVAARAGSAMAAEL 118 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 G+MK+ E++DA+ M + V L PR+ A +I PLLT++A + I+G V D+ Sbjct: 119 GAMKVTEQVDALLAMAVQPVHYLALPRLLAAVIMTPLLTVIAVYIGIVGGYFVGVILLDV 178 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 F + ++++ GL K+ + +++ EG + +G T VV Sbjct: 179 NPGTFMQKMLEMVNSSDLYNGLFKSVIFGLLLALISCYEGLQAKGGAEGVGLVTTRAVVY 238 Query: 353 SISIVIIIDSLFAIFYF 369 S ++I D + F Sbjct: 239 SAISILIADYILTALLF 255 >gi|218439944|ref|YP_002378273.1| hypothetical protein PCC7424_3003 [Cyanothece sp. PCC 7424] gi|218172672|gb|ACK71405.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7424] Length = 264 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 63/202 (31%), Positives = 105/202 (51%), Gaps = 8/202 (3%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ----FGAEIFSIDLMSILQLREIG 212 + QM VG P + IS VT A + Q+S+ FGA + ++S+ RE+ Sbjct: 43 LDQMAIVG----PESLTISLVTAAFVGMVFTIQVSREFIYFGAGSYVGGVLSLALTRELA 98 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 +LTAV++AGR GSA AEIG+M++ E+IDA+ + D + L+ PR+ A + LP+LT+ Sbjct: 99 PVLTAVVVAGRVGSAFAAEIGTMRVTEQIDALYMLKTDPIDYLVIPRVLACSLMLPILTV 158 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 L+ + I G V Y+I VF + + ++ + +IK+ I ++ G Sbjct: 159 LSLLTGIAGGIAVAESLYNISPVVFLNSARNFLQTWDLVSCMIKSGIFGSLIAVIGCSWG 218 Query: 333 FAVGVHSNSLGKKVTTCVVQSI 354 + +G+ TT VV ++ Sbjct: 219 LTTSGGAKGVGQSTTTAVVTAL 240 >gi|78223740|ref|YP_385487.1| hypothetical protein Gmet_2543 [Geobacter metallireducens GS-15] gi|78194995|gb|ABB32762.1| protein of unknown function DUF140 [Geobacter metallireducens GS-15] Length = 253 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 52/163 (31%), Positives = 97/163 (59%), Gaps = 2/163 (1%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I Q+ +GV + +V L TG V+A Q QL F A + ++++ ++E+G +L+ Sbjct: 39 ITQLDKMGVGSLFIVCLTGLFTGMVMALQALIQLKPFAATSYVGGMVAVTMVKELGPVLS 98 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 ++M+AGR GS+I AE+G+M + E++DA+R G D + L++ R+ A+++++PLL ++ + Sbjct: 99 SLMVAGRVGSSITAELGTMVVTEQVDAMRVEGTDIITRLVTSRLKAMLVAMPLLAVVTDA 158 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319 A++G VI YDI +++ ++ G+ K PF Sbjct: 159 LALLGGY-VIASGYDINLLMYWKSLSQFMVFQDLVEGVAK-PF 199 >gi|300871878|ref|YP_003786751.1| ABC transporter permease-like protein [Brachyspira pilosicoli 95/1000] gi|300689579|gb|ADK32250.1| ABC-type transport system permease protein-like protein [Brachyspira pilosicoli 95/1000] Length = 268 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 64/221 (28%), Positives = 116/221 (52%), Gaps = 6/221 (2%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF--GAEIFSIDLM 203 S+ FK L Q+ +GV V + TG V++ Q A L G F ++ Sbjct: 43 SFSFK----LLTDQIVRMGVESFIVAAVTVLCTGMVMSLQIAVVLDSVLKGISQFVGSMV 98 Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263 ++E+ +L A++ AGR GS++ AEIG+M+++E++DA++T+ + + + PR WA Sbjct: 99 GKAMVKELSPMLLALIFAGRVGSSVTAEIGTMQVSEQLDALKTLYTNPIEYVAVPRFWAA 158 Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323 +ISLP+LT+ A+ ++G ++V + A++F R + +L + LIK+ Sbjct: 159 VISLPMLTVSADIIGVLGGAVVTVFVLNNDPAIYFDRAIAVISLGDFIGSLIKSTIFGAE 218 Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + +++ GF + +GK T VV S +++I D L Sbjct: 219 VILISCFYGFRTNGGAEGVGKATTISVVYSFMLILITDYLL 259 >gi|222055776|ref|YP_002538138.1| protein of unknown function DUF140 [Geobacter sp. FRC-32] gi|221565065|gb|ACM21037.1| protein of unknown function DUF140 [Geobacter sp. FRC-32] Length = 257 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 116/212 (54%), Gaps = 4/212 (1%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA-EIFSIDLMSILQLREIGVL 214 L +Q+Y+ G+ + V+++IS G VI Q +S GA E + ++ + +RE+G + Sbjct: 45 LRKQIYFTGLESLKVIVIISVTIGIVIITQ---IISLVGANETLTGRVLVWVIIRELGPV 101 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 LTA++I RSG+AI E+G MKIN EI++I ++G+ R LI PRI + S+ +LTI Sbjct: 102 LTAIIIIARSGTAIATELGYMKINNEIESIESLGIPADRYLIMPRIIGVTTSVVILTIYF 161 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 +AI+G IV + +PF F S T+ + IK+ F + + G Sbjct: 162 EIAAILGGFIVAAIGWHVPFDKFAQSIFSILTIKELGMSFIKSLFFGLFLSAACCRHGLG 221 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 VG + + + T V+QS+ +V ++D + + Sbjct: 222 VGKSATQIPQAATKGVMQSLFLVFVLDGVITL 253 >gi|107024236|ref|YP_622563.1| hypothetical protein Bcen_2692 [Burkholderia cenocepacia AU 1054] gi|116688439|ref|YP_834062.1| hypothetical protein Bcen2424_0415 [Burkholderia cenocepacia HI2424] gi|206558708|ref|YP_002229468.1| hypothetical protein BCAL0302 [Burkholderia cenocepacia J2315] gi|105894425|gb|ABF77590.1| protein of unknown function DUF140 [Burkholderia cenocepacia AU 1054] gi|116646528|gb|ABK07169.1| protein of unknown function DUF140 [Burkholderia cenocepacia HI2424] gi|198034745|emb|CAR50612.1| putative membrane protein [Burkholderia cenocepacia J2315] Length = 255 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 58/214 (27%), Positives = 118/214 (55%), Gaps = 1/214 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q++++G ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA Sbjct: 42 KQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 101 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+++ AEIG MK E++ A+ M +D ++ +I+PR+WA II++PLL + N Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPIKNVIAPRMWAGIIAMPLLAAIFNAV 161 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 ++G V + F+S+ + A++ G+IK+ A+ +A+ +G+ Sbjct: 162 GVLGGYFVGVVLIGVDPGAFWSQMQGGVQVWADVGNGVIKSIVFGFAVTFIALYQGYEAK 221 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D L F+ Sbjct: 222 PTPEGVSRATTKTVVFASLAVLGLDFLLTALMFS 255 >gi|330430336|gb|AEC21670.1| hypothetical protein PT7_3130 [Pusillimonas sp. T7-7] Length = 262 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 55/214 (25%), Positives = 116/214 (54%), Gaps = 1/214 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q++++G + ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA Sbjct: 48 QQIHFIGNYSLLIIAVSGLFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTA 107 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+++ AEIG MK E+I A+ M +D +R +++PR W ++++P+L + + Sbjct: 108 LLFAGRAGTSLTAEIGLMKAGEQIAAMEVMAVDPIRRVLAPRFWGGVVAMPVLAAVFSMV 167 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 IIG IV I F+S+ + ++ G +K+ A+ ++A+ G+ Sbjct: 168 GIIGGWIVGVVLIGIDPGAFWSQMQGGVDVFKDVLNGFVKSVVFGVAVTLIALHAGWTAK 227 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV +V+ +D + F+ Sbjct: 228 ATPEGVSRATTRTVVSGSLMVLGLDFILTALMFS 261 >gi|166363947|ref|YP_001656220.1| hypothetical protein MAE_12060 [Microcystis aeruginosa NIES-843] gi|166086320|dbj|BAG01028.1| hypothetical protein MAE_12060 [Microcystis aeruginosa NIES-843] Length = 264 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 59/198 (29%), Positives = 104/198 (52%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + QM VG + + ++ + G V Q A + FGA F ++S+ RE+ +LT Sbjct: 43 LEQMSIVGPESLTIALITAAFVGMVFTIQVAREFIFFGAGSFVGGVLSLALTRELAPVLT 102 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV++AGR GSA AEIG+M++ E+IDA+ + D + L+ PR+ A + LPLLTI++ Sbjct: 103 AVVVAGRVGSAFAAEIGTMRVTEQIDALYILKTDPIDYLVIPRVIACSLMLPLLTIISLV 162 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + ++G + Y I +++F + ++ + ++K+ I I+ G Sbjct: 163 TGLLGGLFISDSLYGISYSLFLQSAQNFLETWDLISSMLKSLIFGVLIAIIGCSWGLTTT 222 Query: 337 VHSNSLGKKVTTCVVQSI 354 + +G+ TT VV S+ Sbjct: 223 GGAKGVGQSTTTAVVTSL 240 >gi|254253460|ref|ZP_04946778.1| ABC-type organic solvent resistance transport system permease protein [Burkholderia dolosa AUO158] gi|124896069|gb|EAY69949.1| ABC-type organic solvent resistance transport system permease protein [Burkholderia dolosa AUO158] Length = 255 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 58/214 (27%), Positives = 119/214 (55%), Gaps = 1/214 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q++++G ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA Sbjct: 42 KQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 101 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+++ AEIG MK E++ A+ M +D ++ +I+PR+WA II++PLL + N Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPIKNVIAPRMWAGIIAMPLLAAIFNAV 161 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 ++G V + F+S+ S + A++ G++K+ A+ +A+ +G+ Sbjct: 162 GVLGGYFVGVVLIGVDPGAFWSQMQSGVQVWADVGNGVLKSIVFGFAVTFIALFQGYEAK 221 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D L F+ Sbjct: 222 PTPEGVSRATTKTVVFASLAVLGLDFLLTALMFS 255 >gi|134294506|ref|YP_001118241.1| hypothetical protein Bcep1808_0394 [Burkholderia vietnamiensis G4] gi|134137663|gb|ABO53406.1| protein of unknown function DUF140 [Burkholderia vietnamiensis G4] Length = 255 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 58/214 (27%), Positives = 118/214 (55%), Gaps = 1/214 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q++++G ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA Sbjct: 42 KQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 101 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+++ AEIG MK E++ A+ M +D ++ +I+PR+WA II++PLL + N Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPLKTVIAPRLWAGIIAMPLLAAIFNAV 161 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 ++G V + F+S+ + A++ G+IK+ A+ +A+ +G+ Sbjct: 162 GVLGGYFVGVVLIGVDPGAFWSQMQGGVEVWADVGNGVIKSIVFGFAVTFIALFQGYEAK 221 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D L F+ Sbjct: 222 PTPEGVSRATTKTVVFASLAVLGLDFLLTALMFS 255 >gi|58040555|ref|YP_192519.1| ABC transporter permease protein [Gluconobacter oxydans 621H] gi|58002969|gb|AAW61863.1| ABC transporter permease protein [Gluconobacter oxydans 621H] Length = 387 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 65/204 (31%), Positives = 110/204 (53%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +V +++F+ GA++A GA +L +F A I+ L+ I +RE+ ++TA+++AGR+G A Sbjct: 184 IVGIVNFLIGAILAFVGAVELQKFAAGIYVASLVGIAMVREMAAVMTAIIMAGRTGGAYA 243 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A I +M+ NEEIDA+ G+ LI P + +LII++P L + ++G +V Sbjct: 244 ARISTMQGNEEIDALNVFGIPTSTYLILPAVLSLIITMPFLYLYGCLIGMLGGFVVAISM 303 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 DI A +F + + + G K+ IG+ + + G G + +G T Sbjct: 304 LDITAAGYFHQTVTAFGIGQFIFGFTKSLVFGAFIGLTSCRIGLKAGRSAADVGIAATRA 363 Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373 VV I VI ID++FA+ +GI Sbjct: 364 VVVGIVGVIAIDAIFAVIADVLGI 387 >gi|307634769|gb|ADI83773.2| transporter membrane protein of unknown function DUF140 [Geobacter sulfurreducens KN400] Length = 256 Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 50/157 (31%), Positives = 95/157 (60%), Gaps = 2/157 (1%) Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 +GV + ++ L TG V+A Q QL F A + ++++ ++E+G +L+++M+AG Sbjct: 48 MGVGSLFIICLTGLFTGMVMALQALIQLKPFAATSYVGGMVAVTMVKELGPVLSSLMVAG 107 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 R GS+I AE+G+M + E++DA+R G D V L++ R+ AL++++P+L ++ + A++G Sbjct: 108 RVGSSITAELGTMVVTEQVDAMRVEGTDIVSRLVTSRLKALMLAMPMLALVTDAVALLGG 167 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319 I I YDI +++ ++ G++K PF Sbjct: 168 YI-IAAGYDINLLMYWKSLPQFMVFQDLIEGVMK-PF 202 >gi|161523498|ref|YP_001578510.1| hypothetical protein Bmul_0318 [Burkholderia multivorans ATCC 17616] gi|189351729|ref|YP_001947357.1| putative ABC transporter permease [Burkholderia multivorans ATCC 17616] gi|221201636|ref|ZP_03574674.1| toluene tolerance ABC transporter, permease protein [Burkholderia multivorans CGD2M] gi|221207289|ref|ZP_03580299.1| toluene tolerance ABC transporter, permease protein [Burkholderia multivorans CGD2] gi|221213427|ref|ZP_03586402.1| toluene tolerance ABC transporter, permease protein [Burkholderia multivorans CGD1] gi|160340927|gb|ABX14013.1| protein of unknown function DUF140 [Burkholderia multivorans ATCC 17616] gi|189335751|dbj|BAG44821.1| putative ABC transport system permease protein [Burkholderia multivorans ATCC 17616] gi|221166879|gb|EED99350.1| toluene tolerance ABC transporter, permease protein [Burkholderia multivorans CGD1] gi|221172877|gb|EEE05314.1| toluene tolerance ABC transporter, permease protein [Burkholderia multivorans CGD2] gi|221178452|gb|EEE10861.1| toluene tolerance ABC transporter, permease protein [Burkholderia multivorans CGD2M] Length = 255 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 57/214 (26%), Positives = 118/214 (55%), Gaps = 1/214 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q++++G ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA Sbjct: 42 KQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 101 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+++ AEIG MK E++ A+ M +D ++ +I+PR+WA II++PLL + N Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPIKTVIAPRMWAGIITMPLLAAIFNAV 161 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 ++G V + F+S+ + A++ G++K+ A+ +A+ +G+ Sbjct: 162 GVLGGYFVGVVLIGVDPGAFWSQMQGGVEVWADVGNGVLKSIVFGFAVTFIALFQGYEAK 221 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D L F+ Sbjct: 222 PTPEGVSRATTKTVVFASLAVLGLDFLLTALMFS 255 >gi|238758308|ref|ZP_04619486.1| hypothetical protein yaldo0001_1950 [Yersinia aldovae ATCC 35236] gi|238703431|gb|EEP95970.1| hypothetical protein yaldo0001_1950 [Yersinia aldovae ATCC 35236] Length = 208 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 65/195 (33%), Positives = 104/195 (53%), Gaps = 5/195 (2%) Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G V+ QG L+ + AE ++S+ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 15 GMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKAT 74 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI--VIWKYYDIPFAV 296 E+I ++ M +D +R +++PR WA +IS+PLLT + I G S+ V WK D F Sbjct: 75 EQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDAGF-- 132 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S + ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 133 FWSAMQNAVEWRTDLLNCLIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSL 192 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 193 AVLGLDFVLTALMFG 207 >gi|148264681|ref|YP_001231387.1| hypothetical protein Gura_2637 [Geobacter uraniireducens Rf4] gi|146398181|gb|ABQ26814.1| protein of unknown function DUF140 [Geobacter uraniireducens Rf4] Length = 401 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 62/220 (28%), Positives = 120/220 (54%) Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 + LI + G +P+V LIS + G ++A + QL FGA+I+ D++ I +R +G Sbjct: 182 MDLIVTIQETGAQALPIVTLISLLVGMILAFIASIQLKMFGAQIYVADVVGIGIVRVMGA 241 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 ++T ++++GR+G+A A++G+M++NEEIDA+ T+G V L+ PR+ AL++ +PLL + Sbjct: 242 IMTGIIMSGRTGAAFAAQLGTMQVNEEIDALETLGFSPVEFLVLPRMLALMLMMPLLCVY 301 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 ++ ++G IV D+ F + + S L + GL + + + G Sbjct: 302 SDLMGVLGGMIVGVGMLDLGFMEYVHQSRSALNLTHFLVGLFHSFVFGILVAVAGCLRGL 361 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 ++++G T+ VV I +++ ++ + +GI Sbjct: 362 QCERSASAVGYAATSAVVTGIVCIVVATAIITLSCQVLGI 401 >gi|78064990|ref|YP_367759.1| ABC transporter, inner membrane subunit [Burkholderia sp. 383] gi|77965735|gb|ABB07115.1| ABC transporter, inner membrane subunit [Burkholderia sp. 383] Length = 255 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 57/214 (26%), Positives = 118/214 (55%), Gaps = 1/214 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q++++G ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA Sbjct: 42 KQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 101 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+++ AEIG MK E++ A+ M +D ++ +I+PR+WA II++PLL + N Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPIKNVIAPRMWAGIIAMPLLAAIFNAV 161 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 ++G V + F+S+ + A++ G++K+ A+ +A+ +G+ Sbjct: 162 GVLGGYFVGVVLIGVDPGAFWSQMQGGVQVWADVGNGVLKSIVFGFAVTFIALYQGYEAK 221 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D L F+ Sbjct: 222 PTPEGVSRATTKTVVFASLAVLGLDFLLTALMFS 255 >gi|83945272|ref|ZP_00957621.1| ABC transporter, permease protein, putative [Oceanicaulis alexandrii HTCC2633] gi|83851442|gb|EAP89298.1| ABC transporter, permease protein, putative [Oceanicaulis alexandrii HTCC2633] Length = 255 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 60/178 (33%), Positives = 101/178 (56%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G+ A+ + F L++Q++ +G +PVV L + TGA +A S+F AE F Sbjct: 26 GQALAALVRPPYFGGQLVQQIFKIGFLSLPVVGLTALFTGAALALNIYTGGSRFNAESFV 85 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 +++++ +RE+G ++ A+M+AGR S I AEIG+M+ E+IDA+ T+ D +R LI+PR Sbjct: 86 PNIVAMGIVRELGPVIAALMLAGRVSSGIAAEIGAMRATEQIDALHTLATDPMRYLIAPR 145 Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 + A ++ LP+L A+ I G +V D ++ + +I +GLIKA Sbjct: 146 VLAGVLVLPILVATADIIGIYGGYLVSVHTLDFNPTIYVRNTWDFLSDWDIISGLIKA 203 >gi|126668782|ref|ZP_01739730.1| ABC-type transport system involved in resistance to organic solvents, permease component [Marinobacter sp. ELB17] gi|126626765|gb|EAZ97414.1| ABC-type transport system involved in resistance to organic solvents, permease component [Marinobacter sp. ELB17] Length = 259 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 70/239 (29%), Positives = 127/239 (53%), Gaps = 15/239 (6%) Query: 138 NTGEFCASSYKFKGFLLS--------------LIRQMYYVGVSGVPVVILISFVTGAVIA 183 NT +F AS + FLL L++Q+Y VGV + +V++ G V+ Sbjct: 10 NTLDFLASFGRASQFLLGVLVGVPKPSVGLPLLLKQIYSVGVLSLVIVVVSGLFIGMVLG 69 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 QG LS FG+E ++++ +RE+G ++TA++ AGR+GSA+ AEIG MK E++ + Sbjct: 70 LQGYTILSDFGSESAIGQMIALTLVRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSS 129 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG+D +R +I+PR+WA +S+P+L ++ + I+G +V ++ + F+ + Sbjct: 130 MEMMGVDPLRRVIAPRLWAGFLSMPILALVFSMVGILGGMLVGVEWLGVFEGSFWGNMQA 189 Query: 304 TATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + ++ G+IK+ +A+ +G+ S + T VV S V+ +D Sbjct: 190 SVDFRDDVLNGVIKSVVFGFVCAWIAVYQGYDCVPTSAGISSATTKTVVYSSLAVLGLD 248 >gi|170731749|ref|YP_001763696.1| hypothetical protein Bcenmc03_0394 [Burkholderia cenocepacia MC0-3] gi|254246538|ref|ZP_04939859.1| hypothetical protein BCPG_01288 [Burkholderia cenocepacia PC184] gi|124871314|gb|EAY63030.1| hypothetical protein BCPG_01288 [Burkholderia cenocepacia PC184] gi|169814991|gb|ACA89574.1| protein of unknown function DUF140 [Burkholderia cenocepacia MC0-3] Length = 255 Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 57/214 (26%), Positives = 118/214 (55%), Gaps = 1/214 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q++++G ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA Sbjct: 42 KQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 101 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+++ AEIG MK E++ A+ M +D ++ +I+PR+WA II++PLL + N Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPIKNVIAPRMWAGIIAMPLLAAIFNAV 161 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 ++G V + F+S+ + A++ G++K+ A+ +A+ +G+ Sbjct: 162 GVLGGYFVGVVLIGVDPGAFWSQMQGGVQVWADVGNGVLKSIVFGFAVTFIALYQGYEAK 221 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D L F+ Sbjct: 222 PTPEGVSRATTKTVVFASLAVLGLDFLLTALMFS 255 >gi|254497755|ref|ZP_05110528.1| toluene tolerance protein Ttg2B [Legionella drancourtii LLAP12] gi|254353048|gb|EET11810.1| toluene tolerance protein Ttg2B [Legionella drancourtii LLAP12] Length = 260 Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 115/209 (55%), Gaps = 1/209 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L Q+Y+VGV ++++ + G V+ QG L +FGA L+++ RE+G ++ Sbjct: 43 LCHQIYFVGVLSCLIIVVSALFIGMVVGLQGYNTLQKFGASSQLGQLLALSISRELGPVI 102 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 +A++ AGR+GSA+ AEIG MK E++ ++ MG+D + +I PR A I+LP+L+++ + Sbjct: 103 SALLFAGRAGSALTAEIGLMKTTEQLSSMDMMGVDPLGRVIYPRFMAGFITLPVLSLIFS 162 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 AI+G + + + F+S + ++ +G+IK+ A + +A+ +GF Sbjct: 163 AVAILGGYFIGVHWLGVDAGSFWSNMQAAVNFRIDVLSGIIKSLVFAFVVTWIAVFQGFE 222 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + + + T VV S V+ +D L Sbjct: 223 CVPTAEGISQATTKTVVYSSLAVLGLDFL 251 >gi|170703432|ref|ZP_02894205.1| protein of unknown function DUF140 [Burkholderia ambifaria IOP40-10] gi|170131663|gb|EDT00218.1| protein of unknown function DUF140 [Burkholderia ambifaria IOP40-10] Length = 255 Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 57/214 (26%), Positives = 118/214 (55%), Gaps = 1/214 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q++++G ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA Sbjct: 42 KQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 101 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ +GR+G+++ AEIG MK E++ A+ M +D ++ +I+PR+WA II++PLL + N Sbjct: 102 LLFSGRAGTSLTAEIGLMKAGEQLTALEMMAVDPIKTVIAPRLWAGIIAMPLLAAIFNAV 161 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 ++G V + F+S+ + A++ G+IK+ A+ +A+ +G+ Sbjct: 162 GVLGGYFVGVVLIGVDPGAFWSQMQGGVQVWADVGNGVIKSIVFGFAVTFIALFQGYEAK 221 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D L F+ Sbjct: 222 PTPEGVSRATTKTVVFASLAVLGLDFLLTALMFS 255 >gi|71909013|ref|YP_286600.1| hypothetical protein Daro_3401 [Dechloromonas aromatica RCB] gi|71848634|gb|AAZ48130.1| Protein of unknown function DUF140 [Dechloromonas aromatica RCB] Length = 263 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 59/226 (26%), Positives = 123/226 (54%), Gaps = 2/226 (0%) Query: 145 SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204 S F+ L+L R++Y+ GV + ++++ G V+ QG L +FG+ L++ Sbjct: 36 SGSSFRRLPLTL-REIYFSGVLSLLIIMVSGLFVGLVLGLQGYEILQRFGSTEALGTLVA 94 Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264 + RE+G +L A+ A R+GS++ AEIG MK E++ A+ M ++ + +++PR W + Sbjct: 95 LSLTRELGPVLAAIFFASRAGSSVTAEIGLMKATEQLKAMDMMAVNPIARVVAPRFWGGV 154 Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACA 323 IS+PLL + + ++G ++ + + ++S+ ++ +I+ G++K+ A Sbjct: 155 ISMPLLAAIFSAMGVLGGWLIGVVFIGVDDGAYWSQMQASVDFRYDIWNGVVKSFVFGIA 214 Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + ++A+ EG+ + + + +T VV S+ V+ +D + F F Sbjct: 215 VSLIAVFEGYDSVPTAEGVSRAITRTVVTSVLTVLALDFVLTSFMF 260 >gi|162451968|ref|YP_001614335.1| putative ABC transport system permease protein [Sorangium cellulosum 'So ce 56'] gi|161162550|emb|CAN93855.1| putative ABC transport system permease protein [Sorangium cellulosum 'So ce 56'] Length = 296 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 66/206 (32%), Positives = 116/206 (56%), Gaps = 1/206 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 +R +Y +GV +P+V++ + TGA++ Q A + +FGA LREI LLT Sbjct: 83 MRNLYRMGVKSMPIVVVTALFTGAIMVIQAAPLVERFGAHGLLGWGAGFGTLREIAPLLT 142 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A+MI GR G+ AE+G+M + E+IDA+R + +D V LI+PR A++++L L I A+ Sbjct: 143 ALMINGRVGANNTAELGTMVVTEQIDALRVLAIDPVSFLIAPRFLAMVLTLLLSVIFADA 202 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHST-ATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 A++GA++ + AVF++ S + ++ +GL+K+ + + + + G V Sbjct: 203 LALLGAALTGDLLLGVAPAVFYNGLTSGLLDIGDVMSGLVKSVVFGVVLALSSCQYGLGV 262 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361 + +G+ V VV S + + I+D Sbjct: 263 TGGAPGVGRAVNATVVASAAGIFILD 288 >gi|330991860|ref|ZP_08315809.1| putative ABC transporter permease protein [Gluconacetobacter sp. SXCC-1] gi|329760881|gb|EGG77376.1| putative ABC transporter permease protein [Gluconacetobacter sp. SXCC-1] Length = 382 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 62/204 (30%), Positives = 110/204 (53%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +V +++F+ GA++A G+ +L +F A+I+ L++I +RE+ ++TA+++AGR+G A Sbjct: 179 IVGVVNFLVGAILAFVGSVELHKFAADIYVASLVAIAMVREMSAVMTAIIMAGRTGGAYA 238 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A I +M+ NEEIDA++ G+ LI P + AL ++PLL + ++G +V + Sbjct: 239 ARISTMQANEEIDALQVFGIPVASYLILPSVLALGFTMPLLYLYGCLIGMLGGFVVSFIM 298 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 + +F L G IK+ +G+ + + G G + +G T Sbjct: 299 LHVSPLGYFHETLQALPLDQFTFGFIKSLVFGTFVGLTSCRIGLKAGRSAADVGIAATKA 358 Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373 VV I VI +D++FA+ IGI Sbjct: 359 VVVGIVGVIALDAVFAVIANVIGI 382 >gi|241762420|ref|ZP_04760498.1| protein of unknown function DUF140 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373014|gb|EER62672.1| protein of unknown function DUF140 [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 273 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 57/211 (27%), Positives = 108/211 (51%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 + + +G + +PVV L + TG+ +AQQ S+F A+ + I +RE+G +L + Sbjct: 62 EFFEIGWNSLPVVALTAVFTGSALAQQVYAAASRFSAQSTVPAAVVIGMVRELGPVLVGL 121 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 M+ GR SAI AE+G+M++ E+IDA+ T+ D R L++PR++A ++LP L +LAN Sbjct: 122 MVVGRVTSAIAAELGAMRVTEQIDAMETLHTDPYRYLLAPRLYAATLALPFLVMLANVIG 181 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 I G ++ + ++ L+K+ + ++ GF Sbjct: 182 IFGGYLLSISKLGFNPENYLKVTREFLKAEDVHMALVKSTVFGFLVALLGCYNGFFATGG 241 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+ T VV + +++ + + +F+F Sbjct: 242 AAGVGRSTTRAVVSAFIMILFSNLMITMFFF 272 >gi|226329328|ref|ZP_03804846.1| hypothetical protein PROPEN_03233 [Proteus penneri ATCC 35198] gi|225202514|gb|EEG84868.1| hypothetical protein PROPEN_03233 [Proteus penneri ATCC 35198] Length = 180 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 49/119 (41%), Positives = 81/119 (68%), Gaps = 2/119 (1%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 L++Q+Y VGV + ++++ G V+ QG L+ F AE S+ +M L L RE+G + Sbjct: 43 LLKQLYNVGVQSLLIIMVSGLFIGMVLGLQGYLVLTTFSAEA-SLGMMVALSLLRELGPV 101 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 +TA++ AGR+GSA+ AEIG MK E+I ++ M +D +R +++PR WA +IS+PLL+++ Sbjct: 102 VTALLFAGRAGSALTAEIGLMKATEQISSLEMMAVDPLRRVVAPRFWAGLISMPLLSLI 160 >gi|270159893|ref|ZP_06188549.1| toluene tolerance protein Ttg2B [Legionella longbeachae D-4968] gi|289165353|ref|YP_003455491.1| toluene transporter subunit: membrane component of ABC superfamily [Legionella longbeachae NSW150] gi|269988232|gb|EEZ94487.1| toluene tolerance protein Ttg2B [Legionella longbeachae D-4968] gi|288858526|emb|CBJ12407.1| toluene transporter subunit: membrane component of ABC superfamily [Legionella longbeachae NSW150] Length = 260 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 65/213 (30%), Positives = 117/213 (54%), Gaps = 2/213 (0%) Query: 153 LLSLIR-QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211 L SL+R Q+Y+VGV ++I+ + G V+ QG L +FGA L+++ RE+ Sbjct: 39 LWSLVRYQIYFVGVLSCLIIIVSALFIGMVVGLQGYNTLQKFGASSQLGQLLALSISREL 98 Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271 G +++A++ AGR+GSA+ AEIG MK E++ ++ MG+D + +I PR A I+LPLL Sbjct: 99 GPVISALLFAGRAGSALTAEIGLMKATEQLSSMDMMGVDPLGRVIYPRFLAGFIALPLLA 158 Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMK 330 ++ + A+ G + + + F+S + ++ +G+IK+ A + +++ Sbjct: 159 LIFSAVAVFGGYFIGVHWLGVDAGSFWSNMQAAVDFRIDVLSGIIKSLVFAFVVTWISVF 218 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +GF + + + T VV S V+ +D L Sbjct: 219 QGFECVPTAEGISQATTKTVVYSSLAVLGLDFL 251 >gi|260753847|ref|YP_003226740.1| hypothetical protein Za10_1620 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283856508|ref|YP_163326.2| hypothetical protein ZMO1591 [Zymomonas mobilis subsp. mobilis ZM4] gi|258553210|gb|ACV76156.1| protein of unknown function DUF140 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283775512|gb|AAV90215.2| protein of unknown function DUF140 [Zymomonas mobilis subsp. mobilis ZM4] Length = 273 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 57/211 (27%), Positives = 108/211 (51%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 + + +G + +PVV L + TG+ +AQQ S+F A+ + I +RE+G +L + Sbjct: 62 EFFEIGWNSLPVVALTAVFTGSALAQQVYAAASRFSAQSTVPAAVVIGMVRELGPVLVGL 121 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 M+ GR SAI AE+G+M++ E+IDA+ T+ D R L++PR++A ++LP L +LAN Sbjct: 122 MVVGRVTSAIAAELGAMRVTEQIDAMETLHTDPYRYLLAPRLYAATLALPFLVMLANVIG 181 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 I G ++ + ++ L+K+ + ++ GF Sbjct: 182 IFGGYLLSISKLGFNPENYLKVTREFLKAEDVHMALVKSAVFGFLVALLGCYNGFFATGG 241 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+ T VV + +++ + + +F+F Sbjct: 242 AAGVGRSTTRAVVSAFIMILFSNLMITMFFF 272 >gi|260220241|emb|CBA27582.1| UPF0393 membrane protein HI1086 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 260 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 69/267 (25%), Positives = 135/267 (50%), Gaps = 11/267 (4%) Query: 108 KNLH-YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR-QMYYVGV 165 K LH +G + + D + A ++G ++++ G +L+R Q++++G Sbjct: 2 KFLHPAELGFAVRSKLADWGAGARLMGRLVASLGAVLRRP--------ALLRDQIHFMGN 53 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 + ++ + G V+ Q + L +FGA L+S+ +RE G +LTA++ AGR+G Sbjct: 54 YSLAIIAVSGVFVGFVMGLQYYYGLQRFGAADSVGMLISLSLVREFGPVLTALLFAGRAG 113 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 +++ AEIG MK E++ A+ M +D V +++PR W +I++P+L + + ++G IV Sbjct: 114 TSLTAEIGLMKAGEQLSAMEMMAVDPVSRILAPRFWGAVIAMPILAAVFSAVGVLGGWIV 173 Query: 286 IWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 I F+S+ S + ++ G+IK+ A+ +A+ +GF + + Sbjct: 174 SVPMIGIDSGAFWSQMQSGVDVWVDVGNGVIKSVVFGFAVSFIALLQGFEAQPTPEGVAR 233 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFAI 371 T VV + V+ +D + F+I Sbjct: 234 ATTRTVVVASLTVLALDFVLTAMMFSI 260 >gi|78485324|ref|YP_391249.1| hypothetical protein Tcr_0980 [Thiomicrospira crunogena XCL-2] gi|78363610|gb|ABB41575.1| ATP-binding cassette (ABC) superfamily transporter, permease component [Thiomicrospira crunogena XCL-2] Length = 261 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 57/199 (28%), Positives = 109/199 (54%), Gaps = 1/199 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y+ GV +P+++ G V++ QG L + +E + ++ LRE+G ++ Sbjct: 46 LVKQVYFSGVLSLPIILTAGLFVGMVLSLQGYNVLVDYNSEEAVGTMTALSLLRELGPVV 105 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ AGR+GSA+ AEIG M+ E++ A+ M +D ++ + SPR A +I LP+L+++ Sbjct: 106 AALLFAGRAGSALTAEIGLMRSTEQLSALEMMAIDPLKFVFSPRFTAALIVLPMLSLMFI 165 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334 I G IV + + F+++ + ++ G+IK+ A I I+++ +G+ Sbjct: 166 AMGIFGGYIVGVGWLGVDEGAFWTQMNEHVDWNEDVVNGIIKSIAFAVLIAIISLFQGYD 225 Query: 335 VGVHSNSLGKKVTTCVVQS 353 S + + T VV S Sbjct: 226 AIPTSEGVSRATTRTVVHS 244 >gi|319942210|ref|ZP_08016526.1| ABC-type transporter [Sutterella wadsworthensis 3_1_45B] gi|319804263|gb|EFW01155.1| ABC-type transporter [Sutterella wadsworthensis 3_1_45B] Length = 259 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 61/215 (28%), Positives = 121/215 (56%), Gaps = 1/215 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +I Q++++G + ++ + G V+ QG + L +G+E L+++ +RE+G ++ Sbjct: 42 IISQIHFIGNYSLLIISVSGLFVGFVLGLQGYYVLVTYGSEEALGTLVALSLVRELGPVV 101 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+G+A+ AEIG M+ E++ A+ MG+D +R + +PR IS+P+L ++ + Sbjct: 102 TALLFAGRAGTALTAEIGLMRSGEQLAAMEMMGVDPIRRVFAPRFIGGFISMPILALIFS 161 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334 IIGA +V F+S+ S + ++I G +K+ A+ ++A+ +G+A Sbjct: 162 AVGIIGAWMVGVLLIGTDNGAFWSQMESAVDVFSDICNGFVKSVVFGAAVTLIALYQGWA 221 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + + + TT VV S +V+ +D + + F Sbjct: 222 SRPTPDGVARATTTTVVVSSLLVLGLDFIMTAWMF 256 >gi|113869373|ref|YP_727862.1| ABC-type transporter, permease component involved in toluene tolerance [Ralstonia eutropha H16] gi|113528149|emb|CAJ94494.1| ABC-type transporter, permease component involved in toluene tolerance [Ralstonia eutropha H16] Length = 259 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 57/213 (26%), Positives = 119/213 (55%), Gaps = 1/213 (0%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 Q+++VG + ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA+ Sbjct: 46 QVFFVGNLSLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTAL 105 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 + AGR+G+++ AEIG MK E++ A+ M ++ ++ +I+PR WA +I++P+L + + Sbjct: 106 LFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVNPLQRVIAPRFWAGVIAMPVLAAIFSAVG 165 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 I+G +V + + F+S+ + A++ G+IK+ A+ +A+ +GF Sbjct: 166 ILGGYVVGVQLIGVDAGAFWSQMQGGVDVRADVLNGVIKSFIFGIAVTFIALYQGFEAKP 225 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D L F+ Sbjct: 226 TPEGVSRATTRTVVIASLAVLGLDFLLTALMFS 258 >gi|300865432|ref|ZP_07110232.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] gi|300336571|emb|CBN55382.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] Length = 274 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 68/217 (31%), Positives = 108/217 (49%), Gaps = 8/217 (3%) Query: 157 IRQMYYVGVSGVPVVILISFVT----GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 + QM VG P +LI+ VT G V Q A + G ++++ RE+G Sbjct: 49 LDQMVAVG----PESLLIALVTAGFVGMVFTIQVAREFIALGVTNAVGGVLAVSLARELG 104 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 +LTAV+IAGR GSA AEIG+M++ E+IDA+ + D + L+ PR+ A + LP+LTI Sbjct: 105 PVLTAVIIAGRVGSAFAAEIGTMQVTEQIDALYILKTDPIDYLVIPRVIACCLMLPILTI 164 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 L+ + + G ++ + Y +P VF + T +I IKA I ++ G Sbjct: 165 LSLVTGMAGGLLIATRMYGVPPVVFLESARNFLTPWDICAPAIKAFVFGALIAVIGTSWG 224 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+ TT VV S+ + I + + F Sbjct: 225 LTTTGGAKGVGQSTTTAVVTSMLAIFICNFFLSWLMF 261 >gi|148552943|ref|YP_001260525.1| hypothetical protein Swit_0014 [Sphingomonas wittichii RW1] gi|148498133|gb|ABQ66387.1| protein of unknown function DUF140 [Sphingomonas wittichii RW1] Length = 264 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 66/218 (30%), Positives = 120/218 (55%), Gaps = 8/218 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L Q+ +G +PVV + + +GA +AQQ S+F A ++ + +RE+G +L Sbjct: 50 LFEQLMQIGWFSLPVVGMTAIFSGAALAQQTFTAGSRFNATSTVPAIVVLGIVRELGPVL 109 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 +M+AGR SA+ AE+G+M++ E++DA+ T+ D R LI+PR++A +I++PL+ ++AN Sbjct: 110 VGLMVAGRVSSAMAAELGTMRVTEQLDALTTLRTDPYRYLIAPRLFAALIAIPLMVLVAN 169 Query: 276 FSAIIGASIVIWKYYDIPF-AVFF---SRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 I G V Y + F AV + +R TAT ++ L+K+ F I ++ Sbjct: 170 AIGIFGGYFV--AVYKLGFNAVGYLDTTRQFLTAT--DLQMALVKSAFFGFFIALMGCYH 225 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 GF + +G+ T VV + ++++ + + + F Sbjct: 226 GFRAQGGAAGVGRATTDAVVSAFILILLSNMIITLMAF 263 >gi|114321371|ref|YP_743054.1| hypothetical protein Mlg_2222 [Alkalilimnicola ehrlichii MLHE-1] gi|114227765|gb|ABI57564.1| protein of unknown function DUF140 [Alkalilimnicola ehrlichii MLHE-1] Length = 259 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 60/215 (27%), Positives = 115/215 (53%), Gaps = 1/215 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +I+Q+Y VGV + ++++ G V+A QG + L FGA L+++ LRE+G ++ Sbjct: 44 IIQQLYAVGVLSLVIIVVSGLFVGMVLALQGYYTLVDFGAAESVGVLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+GS++ AE+G MK E++ ++ M +D +I+PR A ++++PLL + + Sbjct: 104 TALLFAGRAGSSLTAEVGLMKATEQLSSMEMMAVDPELRVIAPRFLACVVAVPLLAGIFS 163 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G +V + ++ S + + ++ G+IK+ +G +A+ +G+ Sbjct: 164 LVGIYGGYLVSVGLIGLDGGAYWGNMQSAVSFSDDVLNGVIKSVVFGIVVGWIALYKGYE 223 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 S + + T VV + V+ +D L F Sbjct: 224 AVPTSEGVSRATTHGVVHASLAVLGLDFLLTALMF 258 >gi|261855373|ref|YP_003262656.1| hypothetical protein Hneap_0760 [Halothiobacillus neapolitanus c2] gi|261835842|gb|ACX95609.1| protein of unknown function DUF140 [Halothiobacillus neapolitanus c2] Length = 266 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 63/217 (29%), Positives = 116/217 (53%), Gaps = 3/217 (1%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 +++++Y +GV + ++++ G V+ QG LS+F A S+ +M L L RE+G + Sbjct: 50 IVQELYAIGVLSLVIILISGGFVGLVLGLQGYNILSKFNAT-ESLGVMVALSLVRELGPV 108 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGR+GSA+ AEI MK E++ A+ M +D +R +++PR W + S+PLL L Sbjct: 109 VTALLFAGRAGSAVTAEIALMKTTEQLSAMEMMAVDPLRRVVAPRFWGAVFSMPLLAGLF 168 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHST-ATLANIFTGLIKAPFMACAIGIVAMKEGF 333 + I G + + A ++ + + ++ G+IK+ +G++A+ EGF Sbjct: 169 SLVGIAGGYFIGVVVLGVDPASYWGQIQQQMQPVDDVLNGVIKSLVFGAVVGLIAVFEGF 228 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV S V+ +D + + F Sbjct: 229 NAEPTSLGISRATTRTVVLSSLCVLGLDFILTAWMFG 265 >gi|325519291|gb|EGC98730.1| hypothetical protein B1M_40153 [Burkholderia sp. TJI49] Length = 255 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 57/214 (26%), Positives = 118/214 (55%), Gaps = 1/214 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q++++G ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA Sbjct: 42 KQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 101 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+++ AEIG MK E++ A+ M +D ++ +I+PR+WA II++PLL + N Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPIKNVIAPRMWAGIIAMPLLAAIFNAV 161 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 ++G V + F+S+ + A++ G++K+ A+ +A+ +G+ Sbjct: 162 GVLGGYFVGVVLIGVDPGAFWSQMQGGVEVWADVGNGVLKSIVFGFAVTFIALFQGYEAK 221 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D L F+ Sbjct: 222 PTPEGVSRATTKTVVFASLAVLGLDFLLTALMFS 255 >gi|330815311|ref|YP_004359016.1| ABC transporter, inner membrane subunit [Burkholderia gladioli BSR3] gi|327367704|gb|AEA59060.1| ABC transporter, inner membrane subunit [Burkholderia gladioli BSR3] Length = 255 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 58/215 (26%), Positives = 118/215 (54%), Gaps = 3/215 (1%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLT 216 +Q++++G ++ + G V+ QG + L+++GAE S+ L+ L L RE+G ++T Sbjct: 42 KQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGAEQ-SLGLLVALSLVRELGPVVT 100 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+G+++ AEIG MK E++ A+ M +D ++ +++PR+WA II++PLL+ + Sbjct: 101 ALLFAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPIKTVVAPRMWAGIITMPLLSAIFCA 160 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAV 335 ++G V + F+S+ + +++ G++K+ A+ A+ +G+ Sbjct: 161 VGVLGGYFVGVVLIGVDPGAFWSQMQGGVDVWSDVGNGVLKSVVFGFAVTFTALYQGYEA 220 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D L F+ Sbjct: 221 KPTPEGVSRATTKTVVYASLAVLGLDFLLTALMFS 255 >gi|295677863|ref|YP_003606387.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1002] gi|295437706|gb|ADG16876.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1002] Length = 255 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 59/214 (27%), Positives = 121/214 (56%), Gaps = 1/214 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q+++VG + ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA Sbjct: 42 KQIHFVGNYSLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 101 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+++ AEIG MK E++ A+ M +D V+++I+PR+WA IIS+P+L + + Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVDPVKVVIAPRLWAGIISMPILAAIFSAV 161 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 ++G +V + F+S+ S + ++ G++K+ A+ VA+ +G+ Sbjct: 162 GVLGGYVVGVLLIGVDAGAFWSQMQSGVDVWRDVGAGVVKSVVFGLAVTFVALFQGYEAK 221 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D L F+ Sbjct: 222 PTPEGVSRATTRTVVYASLAVLGLDFLLTALMFS 255 >gi|119897098|ref|YP_932311.1| hypothetical protein azo0807 [Azoarcus sp. BH72] gi|119669511|emb|CAL93424.1| conserved hypothetical membrane protein [Azoarcus sp. BH72] Length = 263 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 55/214 (25%), Positives = 116/214 (54%), Gaps = 1/214 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 +R++Y+ GV + ++++ G V+ QG L +FG+ L+++ RE+G ++ Sbjct: 47 LREIYFAGVLSLLIILVSGLFVGLVLGLQGYETLQRFGSSDALGVLVALSLTRELGPVVA 106 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ A R+GSA+ AEIG MK E++ A+ M ++ + +++PR W +IS+PLL + + Sbjct: 107 ALLFASRAGSAVTAEIGLMKATEQLKAMDMMAVNPLARVVAPRFWGGVISMPLLAAMFSA 166 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAV 335 + G ++ + + F+S+ + + ++ G+IK+ A+ ++A+ EG+ Sbjct: 167 MGVFGGWLIGVVFIGVDDGAFWSQMQAAVDVRYDVLNGVIKSFVFGVAVSLIAVFEGYDC 226 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + + + +T VV S ++ +D + F F Sbjct: 227 TPTAEGVSRAITRTVVSSALAILALDFVLTSFMF 260 >gi|302877779|ref|YP_003846343.1| hypothetical protein Galf_0536 [Gallionella capsiferriformans ES-2] gi|302580568|gb|ADL54579.1| protein of unknown function DUF140 [Gallionella capsiferriformans ES-2] Length = 262 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 61/208 (29%), Positives = 113/208 (54%), Gaps = 3/208 (1%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 +I++++ GV + ++I+ G V+ QG L ++G+E ++ +M L L RE+G + Sbjct: 45 VIKELFSTGVMSLIIIIVAGLFVGMVLGLQGYETLKRYGSE-SALGVMVALGLVRELGPV 103 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 + A++ A R+GSA+ AEIG MK E+I A+ M ++ + +++PR WA +IS+PLL L Sbjct: 104 MAALLFASRAGSAMTAEIGLMKATEQISAMEMMAVNPIARIVAPRFWAGVISMPLLAALF 163 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGF 333 + I G +V + F+S+ + +I G+IK+ + ++A+ EGF Sbjct: 164 SAVGIFGGYLVGVVQIGVDEGSFWSQMQAAVDFREDIMNGIIKSVVFGTVVTVIALFEGF 223 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIID 361 + + T VV S ++++D Sbjct: 224 DAPPTAEGVSGATTRTVVTSSLAILMLD 251 >gi|225164012|ref|ZP_03726299.1| ABC-type transport system involved in resistance to organic solvents, permease component [Opitutaceae bacterium TAV2] gi|224801394|gb|EEG19703.1| ABC-type transport system involved in resistance to organic solvents, permease component [Opitutaceae bacterium TAV2] Length = 258 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 56/159 (35%), Positives = 93/159 (58%), Gaps = 4/159 (2%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + TG+ S+ + + R +Y G+ VPV++++ TG V+ QG L+ Sbjct: 16 LGDLAQFTGKAFTSAIGSRKLSRRIFRAIYEQGIRCVPVILIVGLFTGLVLGLQGYHVLN 75 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 +FGA L+S+ +RE+G +LTA+M+ G++GSA+ AE+G + +E+IDA+ TMG D Sbjct: 76 RFGASGMLGTLVSLTLVRELGPVLTALMLVGQAGSALAAELGIQRNSEQIDALETMGADA 135 Query: 252 VRILISPRIWALIISLPLLT----ILANFSAIIGASIVI 286 LISPR+ A +I P+ T ++ F + S+V+ Sbjct: 136 HAYLISPRLIAALIVYPIHTAFFCLIGMFGGYLSGSVVL 174 >gi|163854451|ref|YP_001628749.1| hypothetical protein Bpet0147 [Bordetella petrii DSM 12804] gi|163258179|emb|CAP40478.1| putative membrane protein [Bordetella petrii] Length = 259 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/214 (26%), Positives = 117/214 (54%), Gaps = 1/214 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q++++G + ++I+ G V+ QG + L+++G+E L+++ +RE+G ++TA Sbjct: 45 QQVHFIGNYSLLIIIVSGMFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTA 104 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+++ AEIG MK E++ A+ M +D +R ++ PR+W II++P+L + + Sbjct: 105 LLFAGRAGTSLTAEIGLMKAGEQLAAMEVMAVDPMRRVLVPRLWGGIIAMPVLAAVFSMV 164 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 I+G +V + F+S+ S + ++ G++K+ + +VA+ EG+ Sbjct: 165 GILGGWVVGVLLIGVDAGAFWSQMQSGVDVWDDVANGVLKSLVFGVTVTLVALYEGWQAR 224 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV V+ +D L F Sbjct: 225 PTPEGVARATTRTVVVGSLAVLGLDFLLTALMFG 258 >gi|119511793|ref|ZP_01630895.1| hypothetical protein N9414_16364 [Nodularia spumigena CCY9414] gi|119463566|gb|EAW44501.1| hypothetical protein N9414_16364 [Nodularia spumigena CCY9414] Length = 257 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 109/220 (49%) Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209 K + +++ M G + V VIL+S G + Q A +L +FGA ++ R Sbjct: 33 KTYYRKILQHMVTAGPASVSPVILVSGFAGMIFTIQTARELVRFGALDAVGGAFALAFCR 92 Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 E+ LLTA +IAG+ GSA AEIG+M++ E+IDA+ + + + L+ PR+ A I+ +P+ Sbjct: 93 ELAPLLTASIIAGQVGSAFAAEIGAMRVTEQIDALYMLKTNPIDYLVLPRVIACILMMPI 152 Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329 + + A I G ++Y++ F S L+++F L+K + I Sbjct: 153 MMVFALIVGISGGVFAASQFYNVDPEAFLESVRSFLQLSDLFMVLVKGLIFGAIVAINGC 212 Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 G + +G+ TT VV + ++ ++D ++ F Sbjct: 213 SWGLTTKGGAKEVGESATTAVVTTWVLIFMMDFFLSLLMF 252 >gi|237749420|ref|ZP_04579900.1| ABC transport system permease [Oxalobacter formigenes OXCC13] gi|229380782|gb|EEO30873.1| ABC transport system permease [Oxalobacter formigenes OXCC13] Length = 258 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 116/213 (54%), Gaps = 3/213 (1%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTA 217 Q++++G + ++ + G V+ QG + L ++G+E ++ +M L L RE+G ++TA Sbjct: 46 QIFFIGNKSLLIICVSGLFVGFVLGLQGYYILIRYGSEQ-ALGVMVALSLTRELGPVVTA 104 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+++ AEIG MK E++ A+ M ++ V +++PR WA IIS+PLL L + + Sbjct: 105 LLYAGRAGTSLTAEIGLMKAGEQLAAMDMMAVNPVDRILAPRFWAGIISMPLLATLFSAA 164 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFAVG 336 +IG IV + F+S+ + N I G+IK+ A+ +A+ +G+ Sbjct: 165 GVIGGYIVGVVLIGVDDGAFWSQMQQGVDIWNDIGNGVIKSLVFGFAVTFMALFQGYEAR 224 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + T VV S +V+ +D + F Sbjct: 225 PTPEGVSSATTRTVVYSSLLVLWLDFIMTALMF 257 >gi|91786696|ref|YP_547648.1| hypothetical protein Bpro_0794 [Polaromonas sp. JS666] gi|91695921|gb|ABE42750.1| protein of unknown function DUF140 [Polaromonas sp. JS666] Length = 264 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 59/219 (26%), Positives = 119/219 (54%), Gaps = 2/219 (0%) Query: 155 SLIR-QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 L+R Q++++G + ++ + G V+ QG + L ++G+ L+++ +RE+G Sbjct: 46 GLVRDQIFFLGNYSLAIITVSGLFVGFVLGLQGYYTLQRYGSSEALGLLVALSLVRELGP 105 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 ++TA++ AGR+G+++ AEIG MK E++ A+ M +D VR +++PR W +I++PLL + Sbjct: 106 VVTALLFAGRAGTSLTAEIGLMKAGEQLSAMEMMAVDPVRRILAPRFWGGVIAMPLLAAV 165 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 + IIG +V + F+S+ + + ++ G+IK+ + VA+ +G Sbjct: 166 FSAVGIIGGWVVGVVMIGVDAGSFWSQMQAGVDVWRDVGNGVIKSFVFGVTVTFVALHQG 225 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 F + + T VV + V+ +D L + F++ Sbjct: 226 FEAQPTPEGVSRATTRTVVVASLAVLGLDFLLTAWMFSL 264 >gi|194290964|ref|YP_002006871.1| hypothetical protein RALTA_A2885 [Cupriavidus taiwanensis LMG 19424] gi|193224799|emb|CAQ70810.1| conserved hypothetical protein, DUF140; Putative abc-type transporter, membrane component [Cupriavidus taiwanensis LMG 19424] Length = 259 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 56/213 (26%), Positives = 119/213 (55%), Gaps = 1/213 (0%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 Q+++VG + ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA+ Sbjct: 46 QVFFVGNLSLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTAL 105 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 + AGR+G+++ AEIG MK E++ A+ M ++ ++ +++PR WA +I++P+L + + Sbjct: 106 LFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVNPLQRVVAPRFWAGVIAMPVLAAIFSAVG 165 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 I+G +V + + F+S+ + A++ G+IK+ A+ +A+ +GF Sbjct: 166 ILGGYVVGVQLIGVDAGAFWSQMQGGVDVRADVLNGVIKSFIFGIAVTFIALYQGFEARP 225 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D L F+ Sbjct: 226 TPEGVSRATTRTVVIASLAVLGLDFLLTALMFS 258 >gi|118581609|ref|YP_902859.1| hypothetical protein Ppro_3208 [Pelobacter propionicus DSM 2379] gi|118504319|gb|ABL00802.1| protein of unknown function DUF140 [Pelobacter propionicus DSM 2379] Length = 256 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 59/228 (25%), Positives = 119/228 (52%), Gaps = 8/228 (3%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G A ++ + + Q +G + + + +L +G V+A Q QL F A + Sbjct: 25 GGMLARIFRRPSYYREFVVQFDKLGFASLFICLLTGLFSGMVMALQALIQLKPFAATSYV 84 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 +++ ++E+G +L ++M+AGR GSAI AE+G+M + E++DA+R G D ++ L +PR Sbjct: 85 GGMVAATMIKELGPVLASLMVAGRGGSAITAELGTMVVTEQVDAMRVEGTDIIQRLATPR 144 Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319 + A+++++PLLT+ + +++G ++ Y P ++ S ++ GL+K F Sbjct: 145 LKAMLLAMPLLTVATDVISLVGGYVMSAGYGINPI-MYVSGLSQFMVFQDLIEGLVKPLF 203 Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI---SIVIIIDSLF 364 G++ G VG+++ + V Q++ S+ I++ F Sbjct: 204 ----FGLIIAVTGCYVGLNTRGGAEGVGAAAKQAVVLSSVTILVSDFF 247 >gi|56476144|ref|YP_157733.1| organic solvent resistance ABC transporter permease [Aromatoleum aromaticum EbN1] gi|56312187|emb|CAI06832.1| predicted ABC-type transport system involved in resistance to organic solvents, permease component [Aromatoleum aromaticum EbN1] Length = 264 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/214 (26%), Positives = 114/214 (53%), Gaps = 1/214 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 IR++Y+ GV + ++++ G V+ QG L +FG+ L+++ RE+G ++ Sbjct: 47 IREVYFSGVLSLLIIVVSGLFVGMVLGLQGYETLQRFGSGDALGVLVALSLTRELGPVVA 106 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ A R+GSA+ AEIG MK E++ A+ M ++ + +++PR W +IS+PLL L + Sbjct: 107 ALLFASRAGSAVTAEIGLMKATEQLKAMDMMAVNPIARVVAPRFWGGVISMPLLAALFSA 166 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAV 335 + G ++ + F+S+ + ++ G+IK+ A+ ++A+ EG+ Sbjct: 167 MGVFGGWLIGVVLIGVDEGAFWSQMQAAVDFRFDVVNGVIKSVVFGAAVSLIAVFEGYDC 226 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + + + +T VV S ++ +D + F F Sbjct: 227 TPTAEGVSRAITRTVVSSALAILALDFVLTSFMF 260 >gi|220933918|ref|YP_002512817.1| protein of unknown function DUF140 [Thioalkalivibrio sp. HL-EbGR7] gi|219995228|gb|ACL71830.1| protein of unknown function DUF140 [Thioalkalivibrio sp. HL-EbGR7] Length = 260 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 1/206 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I+++Y VGV + ++ + G V+ QG L FGAE ++++ +RE+G ++T Sbjct: 44 IKELYSVGVLSLLIIAVSGLFVGMVLGYQGYITLVNFGAEEALGSVVALSLVRELGPVIT 103 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+GSA+ AEIG MK E++ + M +D V+ +I PR A ISLPLL + + Sbjct: 104 ALLFAGRAGSALSAEIGLMKTTEQLSGMEMMAVDPVKRVILPRFVAAFISLPLLAAIFSA 163 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAV 335 A++G + + ++S+ + ++ G+IK+ + +A+ EG+ Sbjct: 164 VAVMGGYFIGVGLLGVDGGSYWSQMQANVDFYEDVMNGIIKSLVFGFVVAWIAVFEGYDT 223 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361 S + + T VV S V+ +D Sbjct: 224 VPTSEGVSRATTRTVVHSALAVLALD 249 >gi|16329621|ref|NP_440349.1| hypothetical protein slr1045 [Synechocystis sp. PCC 6803] gi|81670420|sp|P73009|Y1045_SYNY3 RecName: Full=Probable ABC transporter permease protein slr1045 gi|1652104|dbj|BAA17029.1| slr1045 [Synechocystis sp. PCC 6803] Length = 263 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 63/208 (30%), Positives = 106/208 (50%), Gaps = 1/208 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + QM VG + + ++ + G V Q A + +GA ++S+ RE+ +LT Sbjct: 42 LEQMNMVGPESMAIALITAGFVGMVFTIQVAREFIYYGATTTIGGVLSLSLTRELAPVLT 101 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV+IAGR GSA AEIG+M++ E++DA+ + D + L+ PR+ A + LP+LT L+ F Sbjct: 102 AVVIAGRVGSAFAAEIGTMRVTEQLDALYMLRTDPIDYLVVPRVIACGLMLPILTGLSLF 161 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + G ++ Y I +F + + L ++F L K+ I I+ G Sbjct: 162 VGMAGGLVISSSLYAINPTIFLNSVQNFTQLWDVFACLFKSLVFGVIIAIIGCSWGLTTT 221 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + +G+ TT VV S+ + I I + F Sbjct: 222 GGAKGVGESTTTAVVTSL-LAIFISNFF 248 >gi|307150966|ref|YP_003886350.1| hypothetical protein Cyan7822_1067 [Cyanothece sp. PCC 7822] gi|306981194|gb|ADN13075.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7822] Length = 266 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 60/213 (28%), Positives = 107/213 (50%), Gaps = 1/213 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + QM VG + + + ++ + V G + Q A + GA ++++ RE+ ++ Sbjct: 43 LEQMMAVGPASLAIALITATVIGMIFTIQVAREFLALGAGSAVGGILALALSRELCPIMM 102 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV++AGR GSA AEIG+M++ E+IDA+ + D V L+ PR+ A I +P LT+LA Sbjct: 103 AVVVAGRVGSAFAAEIGTMRVTEQIDALYMLNADPVEYLVIPRVVACCIMVPALTVLALI 162 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + + G ++I ++Y I VF + + ++ G IK C I I+ G Sbjct: 163 TGLAGGLLMI-RFYGIADTVFLESIQNFVRVWDVICGPIKGIVFGCLIAIIGCNWGLTTT 221 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+ T VV + + I + + + F Sbjct: 222 GGAKGVGESTTAAVVTCLLAIFIANFILSWIMF 254 >gi|299065474|emb|CBJ36643.1| conserved membrane protein of unknown function, DUF140 [Ralstonia solanacearum CMR15] Length = 255 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/216 (26%), Positives = 115/216 (53%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+ Q+ ++G ++ + G V+ QG + L+++G+E L+++ +RE+G ++ Sbjct: 40 LVEQLRFIGNDSFIIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVV 99 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+G+++ AEIG MK NEE+ A+ M +D + +++PR W I++PLL + + Sbjct: 100 TALLFAGRAGTSLTAEIGLMKANEELIAMEMMAVDPLARVLAPRFWGGFIAMPLLAAIFS 159 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTA-TLANIFTGLIKAPFMACAIGIVAMKEGFA 334 I+G V + F+S+ + + ++ G+IK+ A+ VA+ +G+ Sbjct: 160 AVGIVGGYFVGVGLIGVDAGAFWSQMQAGVDVVKDVLNGVIKSVVFGVAVTFVALYQGYE 219 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D + F+ Sbjct: 220 AKATPEGVSRATTRTVVIASLAVLALDFVLTALMFS 255 >gi|311103421|ref|YP_003976274.1| toluene tolerance protein Ttg2B [Achromobacter xylosoxidans A8] gi|310758110|gb|ADP13559.1| toluene tolerance protein Ttg2B [Achromobacter xylosoxidans A8] Length = 262 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 56/214 (26%), Positives = 116/214 (54%), Gaps = 1/214 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q++++G + ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA Sbjct: 48 QQVHFIGNYSLLIIAVSGMFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTA 107 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+++ AEIG MK E++ A+ M +D +R ++ PR+W II++P+L + + Sbjct: 108 LLFAGRAGTSLTAEIGLMKAGEQLAAMEVMAVDPIRRVLVPRLWGGIIAMPILAAVFSMV 167 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 I+G +V + F+S+ + + ++ G+IK+ + +VA+ EG+ Sbjct: 168 GILGGWVVGVLLIGVDAGAFWSQMQNGVDVWKDVANGVIKSLVFGVTVTLVALYEGWQAK 227 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV V+ +D L F Sbjct: 228 PTPEGVARATTRTVVVGSLAVLGLDFLLTALMFG 261 >gi|262377332|ref|ZP_06070556.1| toluene tolerance protein Ttg2B [Acinetobacter lwoffii SH145] gi|262307785|gb|EEY88924.1| toluene tolerance protein Ttg2B [Acinetobacter lwoffii SH145] Length = 259 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 63/199 (31%), Positives = 109/199 (54%), Gaps = 2/199 (1%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I QMY VGV + ++++ GAV+ Q LS FG+E +++ LRE+ ++ Sbjct: 42 IYQMYRVGVLSLLIIVVSGLFIGAVLGLQMFSILSTFGSESMLGTAVALTLLRELAPVVA 101 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+GSA+ AEIG MK E++ ++ +G+D ++ +ISPR+WA I SLP+L+++ Sbjct: 102 ALLFAGRAGSALTAEIGLMKATEQLSSMEMIGVDPLKRVISPRLWAGIFSLPMLSVIFAA 161 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTG-LIKAPFMACAIGIVAMKEGFA 334 I+G +V + ++S S+ ++ G +IK+ A +A+ +G+A Sbjct: 162 VGIMGGKMVGVDFLGADEGAYWSGMESSVQFYKDVLNGTIIKSFVFALICTWIAVYQGYA 221 Query: 335 VGVHSNSLGKKVTTCVVQS 353 S + T VV S Sbjct: 222 CVPTSEGIATSTTRTVVYS 240 >gi|167587707|ref|ZP_02380095.1| hypothetical protein BuboB_20349 [Burkholderia ubonensis Bu] Length = 255 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 56/214 (26%), Positives = 117/214 (54%), Gaps = 1/214 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q++++G ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA Sbjct: 42 KQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 101 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+++ AEIG MK E++ A+ M +D ++ +I+PR+W II++PLL + N Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPIKTVIAPRMWGGIITMPLLAAIFNAV 161 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 ++G V + F+S+ + A++ G++K+ A+ +A+ +G+ Sbjct: 162 GVLGGYFVGVILIGVDSGAFWSQMQGGVQVWADVGNGVLKSIVFGFAVTFIALFQGYEAK 221 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D L F+ Sbjct: 222 PTPEGVSRATTKTVVFASLAVLGLDFLLTALMFS 255 >gi|254294304|ref|YP_003060327.1| hypothetical protein Hbal_1946 [Hirschia baltica ATCC 49814] gi|254042835|gb|ACT59630.1| protein of unknown function DUF140 [Hirschia baltica ATCC 49814] Length = 264 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 57/181 (31%), Positives = 96/181 (53%) Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211 +L ++RQ +G +PVV L + GA +A S+F AE F +++ + RE+ Sbjct: 43 YLREVVRQCIQIGFFSLPVVGLTAVFIGAALALNIYMGGSRFNAEQFVPNIVVLGITREL 102 Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271 G +M+AGR G+ I AEIG+M++ E+IDA+ T+ R L +PR+ A I+LP L Sbjct: 103 GPAFAGLMLAGRVGAGIAAEIGAMRVTEQIDALHTLSAKPERYLFAPRVIAATITLPALV 162 Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 ++A+ ++G +V D ++ T+ ++ +GLIKA I I+ + Sbjct: 163 LIADIIGVMGGWLVSVGALDFNSTIYLRNTLDFMTINDVLSGLIKAGVFGAIIAIMGCYQ 222 Query: 332 G 332 G Sbjct: 223 G 223 >gi|298490672|ref|YP_003720849.1| hypothetical protein Aazo_1524 ['Nostoc azollae' 0708] gi|298232590|gb|ADI63726.1| protein of unknown function DUF140 ['Nostoc azollae' 0708] Length = 261 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 102/206 (49%) Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G + +P V+L+S G + Q A +L +FGA ++ RE+ +LTA +IAG+ Sbjct: 51 GPASLPPVLLVSGFAGMIFTIQTARELVRFGAVENVGGAFALAFCRELAPILTASIIAGQ 110 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 GSA AEIG+M++ E+IDA+ + D + L+ PR+ A + +PL+ ILA I G + Sbjct: 111 VGSAFAAEIGAMRVTEQIDALYMLKTDPIDYLVLPRVIACCLMMPLMMILAVIMGITGGA 170 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 +Y + F T +++F L+K + + G + +G Sbjct: 171 FAASYFYQVQPETFLESVRDFLTPSDVFIILLKGLIFGLIVAVNGCSWGLTTKGGAKEVG 230 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYF 369 + TT VV + + I+D + A+ F Sbjct: 231 ESATTAVVTTWVAIFIMDFILALILF 256 >gi|17547680|ref|NP_521082.1| hypothetical protein RSc2961 [Ralstonia solanacearum GMI1000] gi|17429984|emb|CAD16668.1| putative abc-type transport system involved in resistance to organic solvents, permease component abc transporter protein [Ralstonia solanacearum GMI1000] Length = 255 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 57/216 (26%), Positives = 115/216 (53%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+ Q+ ++G ++ + G V+ QG + L+++G+E L+++ +RE+G ++ Sbjct: 40 LVEQLRFIGNDSFIIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVV 99 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+G+++ AEIG MK NEE+ A+ M +D + +++PR W I++PLL + + Sbjct: 100 TALLFAGRAGTSLTAEIGLMKANEELIAMEMMAVDPLARVLAPRFWGGFIAMPLLAAIFS 159 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTA-TLANIFTGLIKAPFMACAIGIVAMKEGFA 334 I+G V + F+S+ + + ++ G+IK+ A+ VA+ +G+ Sbjct: 160 AVGILGGYFVGVGLIGVDAGAFWSQMQAGVDVVKDVLNGVIKSVVFGVAVTFVALYQGYE 219 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D + F+ Sbjct: 220 AKATPEGVSRATTRTVVIASLAVLALDFVLTALMFS 255 >gi|237747263|ref|ZP_04577743.1| ABC transport system permease [Oxalobacter formigenes HOxBLS] gi|229378614|gb|EEO28705.1| ABC transport system permease [Oxalobacter formigenes HOxBLS] Length = 258 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 59/212 (27%), Positives = 115/212 (54%), Gaps = 1/212 (0%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 Q++++G + ++ + G V+ QG + L ++G+E L+++ RE+G ++TA+ Sbjct: 46 QIFFIGNKSLIIICVSGLFVGFVLGLQGYYILVRYGSEQALGVLVTLALTRELGPVVTAL 105 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 + AGR+G+++ AEIG MK E++ A+ M ++ V+ +++PR WA I+S+P+L L + + Sbjct: 106 LYAGRAGTSLTAEIGLMKAGEQLAAMDMMAVNPVKRILAPRFWAGIVSMPILATLFSAAG 165 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFAVGV 337 +IG IV + F+S+ + N I G+IK+ A+ +A+ +G+ Sbjct: 166 VIGGYIVGVILIGVDDGAFWSQMQEGVDIWNDIGNGVIKSLVFGFAVTFMALFQGYESRP 225 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + T VV S +V+ +D + F Sbjct: 226 TPEGVSSATTRTVVYSSLLVLWLDFIMTALMF 257 >gi|158520050|ref|YP_001527920.1| hypothetical protein Dole_0033 [Desulfococcus oleovorans Hxd3] gi|158508876|gb|ABW65843.1| protein of unknown function DUF140 [Desulfococcus oleovorans Hxd3] Length = 258 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 71/259 (27%), Positives = 129/259 (49%), Gaps = 9/259 (3%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFL-LSLIRQMYYVGVSGVPVV 171 +IG+K + +++ + A I AS K + + ++ Q+Y+ V + ++ Sbjct: 7 YIGRKTLAYVDHLQNMA---AFAIDLCAVLLASPLKGRAVVRWGVVEQIYFTAVQALFLI 63 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 I +S +TG+++ Q ++F ++ LM IL +REIG ++TA+++ RS +A+ E Sbjct: 64 IPLSLLTGSMML----IQFAKFSGQVDLGKLMIILVIREIGPVVTAMLVVLRSATAVTIE 119 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 IG M + EID++ G+D +R+L PR + ++ L I+ + AI+G V+ Sbjct: 120 IGYMNVFNEIDSLEMTGIDPLRLLAIPRFVGITSAIVCLFIVFDLVAILGGYGVVRLTTS 179 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 IP F S S T A+I GL+KA I +V + GF + K +T + Sbjct: 180 IPVGNFLSDIGSAITGADIIVGLVKALCFGVVISVVTLYHGFEAQKRITVIPKITSTAAI 239 Query: 352 QSISIVIIIDSLFA-IFYF 369 + I+ + + +FYF Sbjct: 240 ECFFYCIVTNIFISGLFYF 258 >gi|83748206|ref|ZP_00945233.1| toluene tolerance protein TTG2B [Ralstonia solanacearum UW551] gi|207721840|ref|YP_002252278.1| abc-type transport system involved in resistance to organic solvents, permease component protein [Ralstonia solanacearum MolK2] gi|207744518|ref|YP_002260910.1| abc-type transport system involved in resistance to organic solvents, permease component protein [Ralstonia solanacearum IPO1609] gi|300702838|ref|YP_003744439.1| hypothetical protein RCFBP_10489 [Ralstonia solanacearum CFBP2957] gi|83725174|gb|EAP72325.1| toluene tolerance protein TTG2B [Ralstonia solanacearum UW551] gi|206587007|emb|CAQ17591.1| abc-type transport system involved in resistance to organic solvents, permease component protein [Ralstonia solanacearum MolK2] gi|206595924|emb|CAQ62851.1| abc-type transport system involved in resistance to organic solvents, permease component protein [Ralstonia solanacearum IPO1609] gi|299070500|emb|CBJ41795.1| conserved membrane protein of unknown function, DUF140 [Ralstonia solanacearum CFBP2957] Length = 255 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 58/216 (26%), Positives = 115/216 (53%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI Q+ ++G ++ + G V+ QG + L+++G+E L+++ +RE+G ++ Sbjct: 40 LIEQLRFIGNDSFIIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVV 99 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+G+++ AEIG MK NEE+ A+ M +D + +++PR W I++PLL + + Sbjct: 100 TALLFAGRAGTSLTAEIGLMKANEELIAMEMMAVDPLARVLAPRFWGGFIAMPLLAAIFS 159 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I+G V + F+S+ + + ++ G+IK+ A+ VA+ +G+ Sbjct: 160 AVGIVGGYFVGVGLIGVDPGAFWSQMQAGVDVVDDVINGVIKSVVFGVAVTFVALYQGYE 219 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D + F+ Sbjct: 220 AKATPEGVSRATTRTVVIASLAVLALDFVLTALMFS 255 >gi|91785391|ref|YP_560597.1| ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91689345|gb|ABE32545.1| Putatitive ABC transporter, inner membrane subunit, toluene tolerance Ttg2B-like protein [Burkholderia xenovorans LB400] Length = 255 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 59/214 (27%), Positives = 119/214 (55%), Gaps = 1/214 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q+++VG + ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA Sbjct: 42 KQIHFVGNYSLVIIAVSGLFVGFVLGLQGYYTLTRYGSEEALGLLVALSLVRELGPVVTA 101 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+++ AEIG MK E++ A+ M +D V+I+I+PR+WA IIS+P+L + + Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVDPVKIVIAPRLWAGIISMPILAAIFSAV 161 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + G +V + F+S+ + ++ G++K+ A+ VA+ +G+ Sbjct: 162 GVFGGYVVGVLLIGVDAGAFWSQMQGGVDVWHDVGAGVVKSVVFGLAVTFVALFQGYEAK 221 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D L F+ Sbjct: 222 PTPEGVSRATTKTVVYASLAVLGLDFLLTALMFS 255 >gi|144899037|emb|CAM75901.1| ABC transporter permease protein [Magnetospirillum gryphiswaldense MSR-1] Length = 257 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 60/214 (28%), Positives = 113/214 (52%), Gaps = 2/214 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 +R M +G +PVV L + TG V+A Q S+F AE ++ + RE+ +L Sbjct: 43 LRAMVEIGYYSLPVVGLTAVFTGMVLALQSYSGFSRFAAESAVATVVVLSVTRELAPVLA 102 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 +M+AGR G+++ AEIG+M++ E+IDA+ T+ + + L++PR+ A ++ +P L ++A+ Sbjct: 103 GLMVAGRIGASMAAEIGTMRVTEQIDALTTLSTNPFKYLVAPRLLAGLLMVPCLVLVADI 162 Query: 277 SAIIGASIV-IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 + G IV ++K P + + +R ++ +GL KA I ++ G+ Sbjct: 163 IGVFGGYIVGVYKLGFNP-STYLARTWEFLEPLDVISGLTKAAVFGFIISLMGCYHGYYS 221 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G T VV + +++I + + YF Sbjct: 222 RGGAQGVGAATTNSVVSAAIMILIFNYVITALYF 255 >gi|42520801|ref|NP_966716.1| hypothetical protein WD0989 [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410541|gb|AAS14650.1| membrane protein, putative [Wolbachia endosymbiont of Drosophila melanogaster] Length = 260 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 1/203 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 RQ+ +G +P+V L GA I Q + E L++I ++E+G +L + Sbjct: 49 RQIIEIGFFSLPIVGLTGVFIGAAIVLQSSLSDPSINQEQIIPKLVTITIIKELGPVLIS 108 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +++ G+ GS++ AEIG+M+I E+IDA+ T+ ++ + LI+PRI A II P+LT+ A+ Sbjct: 109 LIMVGKVGSSVAAEIGTMRITEQIDALTTLNINPFKYLIAPRILASIIVFPILTVCADLI 168 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 I G I ++ ++ + TGLIKA I + + G+ Sbjct: 169 GIFGGCITAVFEFNHNLNIYIKHTAQFFNTYDFITGLIKATAFGAIISVSSCYYGYHCKE 228 Query: 338 HSNSLGKKVTTCVVQSISIVIII 360 + +G T+ VV S SI+II+ Sbjct: 229 GARGVGVATTSTVVLS-SILIIL 250 >gi|217969318|ref|YP_002354552.1| hypothetical protein Tmz1t_0889 [Thauera sp. MZ1T] gi|217506645|gb|ACK53656.1| protein of unknown function DUF140 [Thauera sp. MZ1T] Length = 262 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 55/214 (25%), Positives = 114/214 (53%), Gaps = 1/214 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 IR++Y+ GV + ++++ G V+ QG L ++G+ ++++ LRE+G ++ Sbjct: 47 IRELYFSGVLSLLIIMVSGLFVGLVLGLQGYDILQRYGSADAVGVMVALSLLRELGPVIA 106 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ A R+GSAI AEIG MK E++ A+ M ++ + +++PR W ++S+PLL L + Sbjct: 107 ALLFASRAGSAITAEIGLMKTTEQLKAMDMMAVNPIARVVAPRFWGGVLSMPLLAALFSA 166 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAV 335 + G ++ + F+S+ + ++ G+IK+ + ++A+ EG+ Sbjct: 167 MGVFGGWLITVVVIGVDDGAFWSQMQAAVEFRYDVVNGVIKSAVFGTVVSLIAVFEGYDC 226 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + + + +T VV S ++ +D + F F Sbjct: 227 QPTAEGVSRAITRTVVTSALAILALDFVLTSFMF 260 >gi|319778667|ref|YP_004129580.1| Uncharacterized ABC transporter, permease component YrbE [Taylorella equigenitalis MCE9] gi|317108691|gb|ADU91437.1| Uncharacterized ABC transporter, permease component YrbE [Taylorella equigenitalis MCE9] Length = 258 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 68/218 (31%), Positives = 117/218 (53%), Gaps = 7/218 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 +I Q++++G + ++ + G V+ QG LS +G+E S+ L+ L L RE+G + Sbjct: 43 VIEQLHFIGNHSLIIIAVSGLFVGFVLGLQGYHTLSMYGSE-ESLGLVVSLALTRELGPV 101 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGR+G+A AEIG MK E++ A+ MG++ +R ++ PR W I++P+L + Sbjct: 102 VTALLFAGRAGTATTAEIGLMKSGEQLAAMDVMGINPIRRILVPRFWGGTIAMPILATI- 160 Query: 275 NFSAIIGASIVIWKYY--DIPFAVFFSRFHS-TATLANIFTGLIKAPFMACAIGIVAMKE 331 FSAI + D+ F+S+ S T + +I G IK+ A+ ++A+ E Sbjct: 161 -FSAIGVVGGWVVGVVLIDVDSGSFWSQMQSGTDIVEDILNGFIKSVVFGVAVMLIALFE 219 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 G+ + K T VV+S V+ +D L F Sbjct: 220 GWYSVPTPEGVAKATTHTVVKSSLCVLGLDFLLTAVMF 257 >gi|88607911|ref|YP_504642.1| putative ABC transporter, permease protein [Anaplasma phagocytophilum HZ] gi|88598974|gb|ABD44444.1| putative ABC transporter, permease protein [Anaplasma phagocytophilum HZ] Length = 244 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 58/211 (27%), Positives = 109/211 (51%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q + V +P+V + S TG +A Q S + F ++++ +RE+G +L Sbjct: 33 KQFFEVWFFSLPIVAVTSLFTGGALALQDTLVGSAKVSGNFMAGIVTVAIVRELGPVLLG 92 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +++AGR G+A+ AEIG+M+I E+IDA+ T+ D LI+PR+ AL++++P+L I A+ Sbjct: 93 LIVAGRIGAAVAAEIGTMRITEQIDALTTLDTDPFHYLIAPRVIALVLAMPVLMIYADIL 152 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 + G +V + L ++ GL+KA I +V G+ + Sbjct: 153 GVFGGFVVGTLGLGYGQEEYLGGVMEFLLLQDVIEGLVKAVSFGLVISLVGCYNGYHCEI 212 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + +G T V + ++I+++ + +FY Sbjct: 213 GARGVGTATTKTSVAASMLIILLNYIITVFY 243 >gi|225619573|ref|YP_002720830.1| ABC transporter permease [Brachyspira hyodysenteriae WA1] gi|225214392|gb|ACN83126.1| Ttg2B, ABC-type transport system, permease component [Brachyspira hyodysenteriae WA1] Length = 268 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 67/236 (28%), Positives = 123/236 (52%), Gaps = 11/236 (4%) Query: 136 ISNTGEFCAS-----SYKFK-GFLLSLIR-QMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 ++ GEF Y F+ F L++ Q+ +GV V + TG V++ Q A Sbjct: 22 LATLGEFATLMIEVFRYTFRPTFSFKLLKEQIIRMGVDSFVVAAVTVLCTGMVMSLQIAV 81 Query: 189 QLSQF--GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 L G F ++ ++E+ +L A++ AGR GS++ AEIG+M+++E++DA++T Sbjct: 82 VLDSVLKGISQFVGSMVGKAMVKELSPMLLALIFAGRVGSSVTAEIGTMQVSEQLDALKT 141 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV-IWKYYDIPFAVFFSRFHSTA 305 + + + + PR WA +ISLP+LT+ A+ ++G ++V ++ P +F R + Sbjct: 142 LYTNPIEYVAVPRFWAAVISLPMLTVSADVIGVLGGAVVTVFVLRSDPMH-YFDRAIAVI 200 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 ++ + LIK+ + +++ GF + +GK TT VV S I++I D Sbjct: 201 SVGDFIGSLIKSTIFGAEVMLISCFYGFRTSGGAEGVGKATTTSVVYSFMIILITD 256 >gi|294339439|emb|CAZ87798.1| Toluene tolerance protein Ttg2B [Thiomonas sp. 3As] Length = 261 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 62/216 (28%), Positives = 118/216 (54%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+QMY++G + ++ + G V+ QG + LS++G+ L+++ +RE+G ++ Sbjct: 45 LIQQMYFLGNLSLVIIAVSGLFVGFVLGLQGYYTLSRYGSSSALGVLVALSLVRELGPVV 104 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+G+++ AEIG MK E+I A+ M +D V +++PR WA +I +PLL + + Sbjct: 105 TALLFAGRAGTSLTAEIGLMKAGEQIAAMEMMAVDPVVRVLAPRFWAGVIVMPLLAAVFS 164 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334 I+G +V + F+S+ S + ++ G+IK+ A+ VA+ +G+ Sbjct: 165 AVGIMGGYVVGVVMIGVDAGQFWSQMQSGVDVFKDVGNGVIKSVVFGLAVTFVALLQGWR 224 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D + F+ Sbjct: 225 SQPTPEGVSRATTRTVVIASLAVLALDFVLTAMMFS 260 >gi|262196627|ref|YP_003267836.1| hypothetical protein Hoch_3441 [Haliangium ochraceum DSM 14365] gi|262079974|gb|ACY15943.1| protein of unknown function DUF140 [Haliangium ochraceum DSM 14365] Length = 258 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 53/162 (32%), Positives = 92/162 (56%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +I QMY +GV +P+V L +F G ++A Q + Q GA RE+G ++ Sbjct: 45 VIDQMYKMGVQSLPIVALAAFFAGVLMALQSGVIVRQLGATSLLGWGGGFAIFRELGPVV 104 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A+M +GR G+ A++G+MKI E++D +R + +D VR L++PRI A++ +L LTI+ N Sbjct: 105 IALMFSGRVGANNAADLGNMKITEQLDGLRALAIDPVRYLVAPRIVAMVGALVSLTIIGN 164 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 A+ G ++ +D+ F F+ + ++ G+IK+ Sbjct: 165 SIALQGGTVFSMLLFDVEFITLFTSLVDNISPFDLLHGVIKS 206 >gi|94312189|ref|YP_585399.1| hypothetical protein Rmet_3258 [Cupriavidus metallidurans CH34] gi|93356041|gb|ABF10130.1| toluene transporter subunit: membrane component of ABC superfamily [Cupriavidus metallidurans CH34] Length = 258 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 55/213 (25%), Positives = 118/213 (55%), Gaps = 1/213 (0%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 Q+++VG + ++ + G V+ QG + L++FG+E L+++ +RE+G ++ A+ Sbjct: 46 QVFFVGNLSLVIIAVSGLFVGFVLGLQGYYTLNRFGSEQALGLLVALSLVRELGPVVAAL 105 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 + AGR+G+++ AEIG MK E++ A+ M ++ ++ +I+PR WA +I++P+L + + Sbjct: 106 LFAGRAGTSLTAEIGLMKAGEQLSAMEMMAVNPLQRVIAPRFWAGVIAMPVLATIFSALG 165 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 ++G +V + + F+S+ + + A++ G+IK+ + +A+ +GF Sbjct: 166 VLGGYLVGVQLIGVDAGAFWSQMQNGVDVRADVLNGVIKSFIFGITVTFIALYQGFEAKP 225 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D L F+ Sbjct: 226 TPEGVSRATTRTVVLASLAVLGLDFLLTALMFS 258 >gi|58697152|ref|ZP_00372577.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of Drosophila simulans] gi|58698663|ref|ZP_00373555.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of Drosophila ananassae] gi|58699132|ref|ZP_00373959.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of Drosophila ananassae] gi|225630652|ref|YP_002727443.1| hypothetical protein WRi_009360 [Wolbachia sp. wRi] gi|58534353|gb|EAL58525.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of Drosophila ananassae] gi|58534816|gb|EAL58923.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of Drosophila ananassae] gi|58536541|gb|EAL59904.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of Drosophila simulans] gi|225592633|gb|ACN95652.1| hypothetical protein WRi_009360 [Wolbachia sp. wRi] Length = 260 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 1/203 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 RQ+ +G +P+V L GA I Q + E L++I ++E+G +L + Sbjct: 49 RQIIEIGFFSLPIVGLTGVFIGAAIVLQSSLSDPLINQEQIIPKLVTITIIKELGPVLIS 108 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +++ G+ GS++ AEIG+M+I E+IDA+ T+ ++ + LI+PRI A II P+LT+ A+ Sbjct: 109 LIMVGKVGSSVAAEIGTMRITEQIDALTTLNINPFKYLIAPRILASIIVFPILTVCADLI 168 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 I G I ++ ++ + TGLIKA I + + G+ Sbjct: 169 GIFGGCITAVFEFNHNLNIYIKHTAQFFNTYDFITGLIKATVFGAIISVSSCYYGYHCKE 228 Query: 338 HSNSLGKKVTTCVVQSISIVIII 360 + +G T+ VV S SI+II+ Sbjct: 229 GARGVGVATTSTVVLS-SILIIL 250 >gi|296135334|ref|YP_003642576.1| protein of unknown function DUF140 [Thiomonas intermedia K12] gi|295795456|gb|ADG30246.1| protein of unknown function DUF140 [Thiomonas intermedia K12] Length = 261 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 62/216 (28%), Positives = 118/216 (54%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+QMY++G + ++ + G V+ QG + LS++G+ L+++ +RE+G ++ Sbjct: 45 LIQQMYFLGNLSLVIIAVSGLFVGFVLGLQGYYTLSRYGSSSALGVLVALSLVRELGPVV 104 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+G+++ AEIG MK E+I A+ M +D V +++PR WA +I +PLL + + Sbjct: 105 TALLFAGRAGTSLTAEIGLMKAGEQIAAMEMMAVDPVVRVLAPRFWAGVIVMPLLAAVFS 164 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334 I+G +V + F+S+ S + ++ G+IK+ A+ VA+ +G+ Sbjct: 165 AVGIMGGYVVGVVMIGVDAGQFWSQMQSGVDVFKDVGNGVIKSVVFGLAVTFVALLQGWR 224 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D + F+ Sbjct: 225 SQPTPEGVSRATTRTVVIASLAVLALDFVLTAMMFS 260 >gi|209516602|ref|ZP_03265456.1| protein of unknown function DUF140 [Burkholderia sp. H160] gi|209503043|gb|EEA03045.1| protein of unknown function DUF140 [Burkholderia sp. H160] Length = 255 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 57/214 (26%), Positives = 120/214 (56%), Gaps = 1/214 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q+++VG + ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA Sbjct: 42 KQIHFVGNYSLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 101 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+++ AEIG MK E++ A+ M +D V+++I+PR+WA I+S+P+L + + Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVDPVKVVIAPRLWAGIVSMPILAAIFSAV 161 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 ++G +V + F+S+ + ++ G++K+ A+ VA+ +G+ Sbjct: 162 GVLGGYVVGVLLIGVDAGAFWSQMQGGVDVWKDVGAGVVKSVVFGLAVTFVALFQGYEAK 221 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D L F+ Sbjct: 222 PTPEGVSRATTRTVVYASLAVLGLDFLLTALMFS 255 >gi|115379773|ref|ZP_01466845.1| ABC-type transport system involved in resistance to organic solvents [Stigmatella aurantiaca DW4/3-1] gi|310821468|ref|YP_003953826.1| ABC transporter permease [Stigmatella aurantiaca DW4/3-1] gi|115363220|gb|EAU62383.1| ABC-type transport system involved in resistance to organic solvents [Stigmatella aurantiaca DW4/3-1] gi|309394540|gb|ADO71999.1| ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1] Length = 272 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 55/203 (27%), Positives = 106/203 (52%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 Q+ +VGV + +V L TG V AQQ + + F AE +++ RE+ + +A+ Sbjct: 61 QLDFVGVGSIFIVALTGLFTGMVFAQQVSTAFALFDAESLVGPTVALTLSRELAPVFSAL 120 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 M+ R+GS++ E+G+M++ E++DA+ TM ++ V+ L+ PR+ + +I P+LT+L S Sbjct: 121 MVTMRAGSSMCTELGTMRVTEQVDALETMAVNPVQYLLVPRVLSGLIMGPVLTMLFFTSG 180 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 + GA ++ + F SR +++ G +K I ++ +G+ Sbjct: 181 MSGAYMISVFVQNTSAGTFISRTQQWMEPLDLYEGTLKGAVFGLTITLICCYKGYNASGG 240 Query: 339 SNSLGKKVTTCVVQSISIVIIID 361 + +G+ T +V S + I+D Sbjct: 241 AKGVGQATTEAMVSSALAIFILD 263 >gi|120609708|ref|YP_969386.1| hypothetical protein Aave_1014 [Acidovorax citrulli AAC00-1] gi|326315802|ref|YP_004233474.1| hypothetical protein Acav_0985 [Acidovorax avenae subsp. avenae ATCC 19860] gi|120588172|gb|ABM31612.1| protein of unknown function DUF140 [Acidovorax citrulli AAC00-1] gi|323372638|gb|ADX44907.1| protein of unknown function DUF140 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 260 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 57/219 (26%), Positives = 120/219 (54%), Gaps = 2/219 (0%) Query: 155 SLIR-QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 L+R Q++++G + ++ + G V+ QG + L ++G+ L+++ +RE+G Sbjct: 42 GLVRDQLHFLGNYSLSIISVSGLFVGFVLGLQGYYTLQRYGSAQALGLLVALSLVRELGP 101 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 +++A++ AGR+G+++ AEIG M+ E++ A+ M +D VR +++PR WA +I++PLL + Sbjct: 102 VVSALLFAGRAGTSLTAEIGLMRAGEQLSAMEMMAVDPVRRILAPRFWAGVIAMPLLAAV 161 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 + +IG IV + F+ + S + A++ G++K+ + +A+ +G Sbjct: 162 FSAVGVIGGWIVGVVMLGVDGGAFWGQMQSGVDVWADVGNGVLKSFVFGVTVTFIALLQG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 + + + T VV + V+ +D L + F+I Sbjct: 222 YIAKPTPEGVSRATTRTVVMASLTVLGLDFLLTAWMFSI 260 >gi|87120456|ref|ZP_01076350.1| hypothetical protein MED121_21902 [Marinomonas sp. MED121] gi|86164099|gb|EAQ65370.1| hypothetical protein MED121_21902 [Marinomonas sp. MED121] Length = 260 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 68/204 (33%), Positives = 118/204 (57%), Gaps = 2/204 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y VGV + ++++ G V+ QG L++FG+E L+++ LRE+G ++ Sbjct: 43 LMKQIYSVGVLSLVIILVSGLFIGMVLGLQGYTILAKFGSEQAVGQLLALTLLRELGPVV 102 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+ SA+ AEIG MK E++ ++ MG+D R +I+PR A +I LP+L ++ + Sbjct: 103 TALLFAGRACSALTAEIGLMKATEQLSSLEMMGVDPYRRIIAPRFIAGLICLPILCVIFS 162 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I+G V + I F+S + + ++ G+IKA A A +A+ +G+ Sbjct: 163 AVGILGGEFVAVTWLQIHGGSFWSLMQQSVYFSTDVVNGIIKAFCFAIATTWIAVFQGYQ 222 Query: 335 VGVHSNSLGKKVT-TCVVQSISIV 357 S +GK T T V+ S+SI+ Sbjct: 223 CEPTSEGIGKATTRTVVLGSLSIL 246 >gi|83591748|ref|YP_425500.1| hypothetical protein Rru_A0408 [Rhodospirillum rubrum ATCC 11170] gi|83574662|gb|ABC21213.1| Protein of unknown function DUF140 [Rhodospirillum rubrum ATCC 11170] Length = 257 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 59/214 (27%), Positives = 113/214 (52%), Gaps = 2/214 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 RQ+ +G +PVV L + TG V++ Q ++F AE + ++ + RE+G +L Sbjct: 44 RQLVEIGYYSLPVVGLTAIFTGMVLSLQSHSGFARFSAEGATATVVVLSMTRELGPVLAG 103 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +M+AGR G+A+ AEIG+MK+ E+IDA+ T+ + + L+ PR+ A + LP+L + A+ Sbjct: 104 LMVAGRIGAAMAAEIGTMKVTEQIDALTTLATNPYKYLVVPRLIAGVTMLPILVLTADII 163 Query: 278 AIIGASIV-IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + G ++ ++K P S + + ++ +GL+KA I ++ G Sbjct: 164 GVFGGYLIGVYKLGFNPSNYIASTWEFLEPM-DVISGLVKASVFGFIIALMGCYHGSQSK 222 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +G T VV + ++++ + + +FA Sbjct: 223 GGAQGVGAATTNAVVSASILILVCNYMITELFFA 256 >gi|218441471|ref|YP_002379800.1| hypothetical protein PCC7424_4570 [Cyanothece sp. PCC 7424] gi|218174199|gb|ACK72932.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7424] Length = 266 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 57/198 (28%), Positives = 100/198 (50%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + QM VG + + ++ + V G + Q A + GA ++++ RE+ ++T Sbjct: 42 LEQMMAVGPGSLVIALITAAVIGMIFTIQVAREFLALGAGSAVGGILALSLARELSPIMT 101 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV++AGR GSA AEIG+M++ E+IDA+ + D + L+ PR+ A + +PL+TI+A Sbjct: 102 AVIVAGRVGSAFAAEIGTMQVTEQIDALYMLKTDPIEYLVVPRLVACCVMVPLMTIIALV 161 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + G ++ YDI VF + +++I +G IK I I+ G Sbjct: 162 IGLAGGLLIASSIYDISIEVFLDSIQTFLKISDILSGPIKGIVFGALIAIIGCNWGLTTT 221 Query: 337 VHSNSLGKKVTTCVVQSI 354 + +G+ T VV + Sbjct: 222 GGAKGVGESTTAAVVTCL 239 >gi|220907786|ref|YP_002483097.1| hypothetical protein Cyan7425_2378 [Cyanothece sp. PCC 7425] gi|219864397|gb|ACL44736.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7425] Length = 255 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 60/213 (28%), Positives = 106/213 (49%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 +L+ Q+ VG + V+LI+ TG + Q +LSQFGA+ ++ RE+ + Sbjct: 41 NLLEQLAIVGWGSLLAVVLINTFTGVLFTIQTTRELSQFGAKSLVGGAFALGYCRELAPV 100 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 LTA ++ G SA AEIG M++ ++IDA+ + D + L+ PR+ + + LP+LT+LA Sbjct: 101 LTAGLLVGEVSSAFAAEIGEMRVTDQIDALYILHTDPIDYLVVPRVLSCCLMLPVLTVLA 160 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 A++G ++ K Y IP VF + + + ++ ++KA G+V G Sbjct: 161 IGGAMLGGTLAGAKIYGIPPTVFLNSIQAVLEVGDLCGIVLKAFIFGIITGLVGCGWGLT 220 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + + K VV +V + + I+ Sbjct: 221 TTGGAKGVSKSTKAAVVNGWILVFFANFVLTIW 253 >gi|296159550|ref|ZP_06842374.1| protein of unknown function DUF140 [Burkholderia sp. Ch1-1] gi|295890258|gb|EFG70052.1| protein of unknown function DUF140 [Burkholderia sp. Ch1-1] Length = 255 Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 58/214 (27%), Positives = 119/214 (55%), Gaps = 1/214 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q+++VG + ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA Sbjct: 42 KQIHFVGNYSLVIIAVSGLFVGFVLGLQGYYTLTRYGSEEALGLLVALSLVRELGPVVTA 101 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+++ AEIG MK E++ A+ M +D V+++I+PR+WA IIS+P+L + + Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVDPVKVVIAPRLWAGIISMPILAAIFSAV 161 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + G +V + F+S+ + ++ G++K+ A+ VA+ +G+ Sbjct: 162 GVFGGYVVGVLLIGVDAGAFWSQMQGGVDVWHDVGAGVVKSVVFGLAVTFVALFQGYEAK 221 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D L F+ Sbjct: 222 PTPEGVSRATTKTVVYASLAVLGLDFLLTALMFS 255 >gi|149194581|ref|ZP_01871677.1| abc transporter, permease protein [Caminibacter mediatlanticus TB-2] gi|149135325|gb|EDM23805.1| abc transporter, permease protein [Caminibacter mediatlanticus TB-2] Length = 259 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 64/207 (30%), Positives = 101/207 (48%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 L Q+Y++G + V+ L SF TG V A Q +FG E F + I ++E+G + Sbjct: 43 ELFNQIYFMGYGSLGVIFLTSFFTGLVEAVQLYNGFHKFGVEDFMGYTIFISIVKELGPV 102 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 ++M+ R SA AE+GSMK+ E+IDA+ M ++ + LI PRI A IISLPLL + Sbjct: 103 FASLMVISRGISAYAAELGSMKVTEQIDALEVMAVNSKQYLIVPRILATIISLPLLILFF 162 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 + + IGA ++ + + + +I G+IK I + G+ Sbjct: 163 DAVSNIGAYLISTYSLGVNGFAYLDHIRQFGEIRDIIEGVIKGAVFGYIISAIGTYIGYN 222 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIID 361 + +G+ T VV S V + D Sbjct: 223 TRGGAKGVGQSTTKAVVYSSVAVFVAD 249 >gi|307731184|ref|YP_003908408.1| hypothetical protein BC1003_3170 [Burkholderia sp. CCGE1003] gi|307585719|gb|ADN59117.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1003] Length = 259 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 57/214 (26%), Positives = 120/214 (56%), Gaps = 1/214 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q+++VG + ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA Sbjct: 46 KQIHFVGNYSLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 105 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+++ AEIG MK E++ A+ M +D V+++++PR+WA IIS+P+L + + Sbjct: 106 LLFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVDPVKVVVAPRLWAGIISMPILAAIFSAV 165 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 ++G +V + F+S+ + ++ G++K+ A+ VA+ +G+ Sbjct: 166 GVLGGYVVGVLLIGVDAGAFWSQMQGGVDVWRDVGAGVVKSVVFGLAVTFVALFQGYEAR 225 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D L F+ Sbjct: 226 PTPEGVSRATTKTVVYASLAVLGLDFLLTALMFS 259 >gi|187479775|ref|YP_787800.1| membrane protein [Bordetella avium 197N] gi|115424362|emb|CAJ50915.1| putative membrane protein [Bordetella avium 197N] Length = 262 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 55/214 (25%), Positives = 115/214 (53%), Gaps = 1/214 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q++++G + ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA Sbjct: 48 QQVHFIGNYSLLIIAVSGLFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTA 107 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+++ AEIG MK E++ A+ M +D +R ++ PR W +I++P+L + + Sbjct: 108 LLFAGRAGTSLTAEIGLMKAGEQLAAMEVMAVDPMRRVLVPRFWGGVIAMPILASVFSMV 167 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 I+G +V + F+S+ + + ++ G+IK+ + +VA+ EG+ Sbjct: 168 GILGGWVVGVVMIGVDTGAFWSQMQAGVDIWDDVLNGVIKSVVFGITVTLVALYEGWQAR 227 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV V+ +D L F Sbjct: 228 PTPEGVARATTRTVVVGSLAVLALDFLLTALMFG 261 >gi|187925542|ref|YP_001897184.1| hypothetical protein Bphyt_3570 [Burkholderia phytofirmans PsJN] gi|187716736|gb|ACD17960.1| protein of unknown function DUF140 [Burkholderia phytofirmans PsJN] Length = 255 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 58/214 (27%), Positives = 119/214 (55%), Gaps = 1/214 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q+++VG + ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA Sbjct: 42 KQIHFVGNYSLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 101 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+++ AEIG MK E++ A+ M +D V+++++PR+WA IIS+P+L + + Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVDPVKVVVAPRLWAGIISMPILAAIFSAV 161 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + G +V + F+S+ + ++ G+IK+ A+ VA+ +G+ Sbjct: 162 GVFGGYVVGVLLIGVDAGAFWSQMQGGVDVWRDVGAGVIKSVVFGLAVTFVALFQGYEAK 221 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D L F+ Sbjct: 222 PTPEGVSRATTKTVVYASLAVLGLDFLLTALMFS 255 >gi|323527530|ref|YP_004229683.1| hypothetical protein BC1001_3209 [Burkholderia sp. CCGE1001] gi|323384532|gb|ADX56623.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1001] Length = 259 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 57/214 (26%), Positives = 119/214 (55%), Gaps = 1/214 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q+++VG + ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA Sbjct: 46 KQIHFVGNYSLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTA 105 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+++ AEIG MK E++ A+ M +D V+++++PR+WA IIS+P+L + + Sbjct: 106 LLFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVDPVKVVVAPRLWAGIISMPILAAIFSAV 165 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + G +V + F+S+ + ++ G++K+ A+ VA+ +G+ Sbjct: 166 GVAGGYVVGVLLIGVDAGAFWSQMQGGVDVWRDVGAGVVKSVVFGLAVTFVALFQGYEAR 225 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D L F+ Sbjct: 226 PTPEGVSRATTKTVVYASLAVLGLDFLLTALMFS 259 >gi|300690218|ref|YP_003751213.1| hypothetical protein RPSI07_0537 [Ralstonia solanacearum PSI07] gi|299077278|emb|CBJ49904.1| conserved membrane protein of unknown function, DUF140 [Ralstonia solanacearum PSI07] Length = 255 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 56/216 (25%), Positives = 115/216 (53%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +I Q+ ++G ++ + G V+ QG + L+++G+E L+++ +RE+G ++ Sbjct: 40 VIEQLRFIGNDSFIIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVV 99 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+G+++ AEIG MK NEE+ A+ M +D + +++PR W I++PLL + + Sbjct: 100 TALLFAGRAGTSLTAEIGLMKANEELIAMEMMAVDPLARVLAPRFWGGFIAMPLLAAIFS 159 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 ++G V + F+S+ + + ++ G+IK+ A+ VA+ +G+ Sbjct: 160 AVGVLGGYFVGVGLIGVDAGAFWSQMQAGVDVVDDVLNGVIKSVVFGVAVTFVALYQGYE 219 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D + F+ Sbjct: 220 AKATPEGVARATTRTVVIASLAVLALDFVLTALMFS 255 >gi|152980680|ref|YP_001354988.1| ABC transport system permease protein [Janthinobacterium sp. Marseille] gi|151280757|gb|ABR89167.1| ABC transport system permease protein [Janthinobacterium sp. Marseille] Length = 258 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 60/215 (27%), Positives = 122/215 (56%), Gaps = 5/215 (2%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTA 217 Q++++G + ++ + G V+ QG + L+++G+E ++ L+ L L RE+G ++TA Sbjct: 46 QIHFIGNYSLVLIAVSGLFVGFVLGLQGYYTLNKYGSEQ-ALGLLVALSLTRELGPVVTA 104 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+++ AEIG MK E++ A+ M ++ ++ +++PR WA +I++P+L + + Sbjct: 105 LLFAGRAGTSLTAEIGLMKAGEQLSAMEMMAVNPLQRVLAPRFWAGVIAMPILAAIFSAV 164 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFAVG 336 I+G IV + + F+S+ + N I G+IK+ A+ +A+ +G+ Sbjct: 165 GILGGYIVGVQLIGVDEGAFWSQMQGGVDVWNDIVNGVIKSIVFGFAVTFIALYQGYEAQ 224 Query: 337 VHSNSLGKKVT-TCVVQSISIVIIIDSLFAIFYFA 370 + + T T V+ S+S V+ +D L F+ Sbjct: 225 PTPEGVARATTRTVVIASLS-VLWLDFLLTALMFS 258 >gi|167947559|ref|ZP_02534633.1| hypothetical protein Epers_13847 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 132 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 50/127 (39%), Positives = 82/127 (64%) Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 QL FGA+I+ +L+ + +RE+G ++TA+++AGR+GSA A++GSM++NEE+DA+RT G Sbjct: 6 QLQMFGAQIYVANLVGLGMVREMGAMMTAIIMAGRTGSAYAAQLGSMQVNEEVDALRTFG 65 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + + L+ PR +LI+ LPLL I ++ I+G IV DI + + L Sbjct: 66 ISPMEYLVLPRSLSLILMLPLLCIWSDVLGIVGGLIVAAALLDISLLHYLQQTQEAINLM 125 Query: 309 NIFTGLI 315 ++ TG+I Sbjct: 126 DVLTGMI 132 >gi|114769304|ref|ZP_01446930.1| ABC transporter, inner membrane subunit [alpha proteobacterium HTCC2255] gi|114550221|gb|EAU53102.1| ABC transporter, inner membrane subunit [alpha proteobacterium HTCC2255] Length = 259 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 108/204 (52%), Gaps = 1/204 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 ++ Q+ +G +PVV L + TGA +A Q +F AE +++I +RE+G +L Sbjct: 46 VLSQLMQIGFYSLPVVGLTALFTGAALALQIYSGGVRFSAESVVPSIVAIGMVRELGPVL 105 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 +M+AGR S+I AE+G+M++ E++DA+ T+ D ++ L++PR+ A I++P+L + + Sbjct: 106 GGLMVAGRVSSSIAAELGTMRVTEQLDALVTLSTDPMKYLVAPRVLAATIAMPILVAVGD 165 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I+G +V + L +I +GL KA I ++ G+ Sbjct: 166 TIGILGGYLVGTGRLGFNSNNYLQNTVDFMELEDITSGLAKAAVFGFIIALMGCYHGYNS 225 Query: 336 GVHSNSLGKKVTTCVVQSISIVII 359 G + +GK VV S S++I+ Sbjct: 226 GRGAQGVGKATINAVV-SASVMIL 248 >gi|42523258|ref|NP_968638.1| ABC transporter permease protein [Bdellovibrio bacteriovorus HD100] gi|39575463|emb|CAE79631.1| ABC transporter permease protein [Bdellovibrio bacteriovorus HD100] Length = 274 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 61/212 (28%), Positives = 113/212 (53%), Gaps = 1/212 (0%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 Q+Y+ G +P++ +++ TG++I Q LS G + + ++ +RE G LL A+ Sbjct: 54 QIYFTGWQALPLISVLALGTGSIILLQSLSNLSLLGGTQMIGNFLIVMIVREAGPLLVAL 113 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++ RSG+A+ +E+G+M+ N EI+A+ +MG++ + ++ PR+ IIS+ L NF A Sbjct: 114 VVIARSGTAVASEVGNMRANREIEALESMGINPLSFIVFPRVLGGIISVLGLAFYFNFIA 173 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 +IG +V D+P A + ++ L+K F I +V +G +V Sbjct: 174 LIGGFLVTKFVQDLPLAFYTDSLMRAFAKEDVLIFLLKNGFSGMIIFVVCCYQGLSVKRS 233 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLF-AIFYF 369 + + + T VV SI V++ + + A+FY Sbjct: 234 PHEVPQVTTQAVVNSIIFVVVFNLIVTALFYL 265 >gi|153846369|ref|ZP_01993858.1| ABC-type transport system, permease component [Vibrio parahaemolyticus AQ3810] gi|149744914|gb|EDM56276.1| ABC-type transport system, permease component [Vibrio parahaemolyticus AQ3810] Length = 220 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 45/99 (45%), Positives = 66/99 (66%) Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G VP+++LI F+ G +IA + QFGA +F D + I RE+G L+TA++ AGR Sbjct: 106 GADAVPIILLIGFLMGVIIAFEIGLVAQQFGAVLFVADGIGISMFRELGPLMTAIVFAGR 165 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 +G+A AEIG+ K+NEEI+A+ T G+ V L+ PRI+A Sbjct: 166 TGAAFAAEIGTQKVNEEINALHTFGICPVEFLVIPRIYA 204 >gi|241762837|ref|ZP_04760900.1| protein of unknown function DUF140 [Acidovorax delafieldii 2AN] gi|241368012|gb|EER62217.1| protein of unknown function DUF140 [Acidovorax delafieldii 2AN] Length = 260 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 58/219 (26%), Positives = 117/219 (53%), Gaps = 2/219 (0%) Query: 155 SLIR-QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 L+R Q++++G + ++ + G V+A QG + L FG+ L+++ LRE+G Sbjct: 42 GLVRDQVHFLGNYSLAIIAVSGLFVGFVMALQGYYTLQDFGSTEALGQLVALSLLRELGP 101 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 ++TA++ AGR+G+++ AEIG M+ E++ A+ M +D VR ++ PR WA +I++P+L + Sbjct: 102 VITALLFAGRAGTSLTAEIGLMRAGEQLSAMEMMAVDPVRRILVPRFWAGVIAMPVLATV 161 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 + ++G +V + F+S+ + +++ LIK+ + VA+ +G Sbjct: 162 FSAVGVMGGWVVAVVMIGLDGGAFWSQMQGGVDVFSDLGNSLIKSLVFGFTVTFVALLQG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 + + + T VV + V+ +D + F+I Sbjct: 222 YTAKPTPEGVSRATTRTVVMASLAVLALDFVLTATMFSI 260 >gi|207109506|ref|ZP_03243668.1| hypothetical protein HpylH_09844 [Helicobacter pylori HPKX_438_CA4C1] Length = 137 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 52/139 (37%), Positives = 83/139 (59%), Gaps = 8/139 (5%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---VP 169 +GK IV+ N + + G+++ F S + K F ++ + +Y++ SG +P Sbjct: 4 KLGKSIVETYNTFLNAFNFCGMILF---YFIKSVFNPKRFCITPL--LYHINESGFKVLP 58 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V IL F+ G +A QGA QL GA + S+++ + L LREIG + +++AGRS S+ Sbjct: 59 VSILTVFIVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFT 118 Query: 230 AEIGSMKINEEIDAIRTMG 248 A+IG MKI EE+DA++TMG Sbjct: 119 AQIGVMKITEELDAMKTMG 137 >gi|78186330|ref|YP_374373.1| putative ABC transport system permease protein [Chlorobium luteolum DSM 273] gi|78166232|gb|ABB23330.1| putative ABC transport system permease protein [Chlorobium luteolum DSM 273] Length = 256 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 63/218 (28%), Positives = 115/218 (52%) Query: 144 ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203 A+ K + + + Q G +P+V++ + G+++A + L FGA+ Sbjct: 28 ATMPKIRRYWRDFLDQAAICGADSIPIVLVSAISIGSLLAIEVGNLLEDFGAKTMLGRST 87 Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263 SI +RE+G LL +M++ R GS AE+G+M+I+E+IDA+R G D V L+ PR+ A Sbjct: 88 SISVIRELGPLLMGLMLSARFGSRNGAELGAMQISEQIDALRAFGTDPVAKLVMPRLLAA 147 Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323 +I LT L++F+ + A+ + Y+ + +F++ + L + G KAP A Sbjct: 148 LIMFLPLTALSDFAGLYSAAYMAEHYHHLDPGIFWNSVYPRLALKDFVVGFAKAPVFAVI 207 Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 I +V+ GF+ ++ +G+ +V S +V+I + Sbjct: 208 ITLVSSFNGFSASGGTSGVGRSTIKGIVVSSGLVLIAN 245 >gi|171058394|ref|YP_001790743.1| hypothetical protein Lcho_1711 [Leptothrix cholodnii SP-6] gi|170775839|gb|ACB33978.1| protein of unknown function DUF140 [Leptothrix cholodnii SP-6] Length = 369 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 68/253 (26%), Positives = 121/253 (47%), Gaps = 18/253 (7%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 IG ++ + + A G V+ G +G + L RQ+ G VP+V L Sbjct: 112 IGHRLAISWVECMATAAFFGEVLIALGRLLRGRSDLQG--VDLWRQVDQAGPLSVPIVSL 169 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 F+ G ++A G QL + GA F D++++ +RE+ L+T V++AGR G+A A+IG Sbjct: 170 TCFLVGLMLAYMGGAQLHRIGAPSFIPDVVTVGMVRELAGLMTGVILAGRLGAAFAAQIG 229 Query: 234 SMKINEEIDAIRTMGLDFV--------RILISPRIWALIISLPLLTILANFSAIIGASIV 285 SM+ EEIDA+R +G+D + L+ + I + L+ +LA A + A Sbjct: 230 SMQAGEEIDALRALGVDPIGYLVLPRLLALLLVAPMLVAIGM-LVGVLAGLPAAVAA--- 285 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 Y + + + + T +++ GL K + + +EG G + ++G Sbjct: 286 ----YGLSPTEYLHKSAAALTWTHLWIGLFKGMMYLGLVALAGCREGLRAGRDAQAVGAA 341 Query: 346 VTTCVVQSISIVI 358 TT VV+++ ++ Sbjct: 342 TTTAVVKALVWIV 354 >gi|218961658|ref|YP_001741433.1| hypothetical protein; putative membrane protein [Candidatus Cloacamonas acidaminovorans] gi|167730315|emb|CAO81227.1| hypothetical protein; putative membrane protein [Candidatus Cloacamonas acidaminovorans] Length = 253 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 111/209 (53%) Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 LL +IRQ+ + GV +P++ I+ G + QG LS FG I+ ++ + + E+ Sbjct: 34 LLVVIRQILFTGVEALPLIGFIALAIGCLTIMQGYAFLSNFGQGIWVHIILVRVVVGELS 93 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 ++TA+++ RSG+AI E+G+M +N E+ +++ + + L+ RI ++IS+ +LT+ Sbjct: 94 GIITALVVIARSGTAISTELGNMVVNREMQLLKSFDIAPMGYLVVSRILGVVISMLVLTL 153 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 N A++G + + + F F + F S T I ++K+ I I A EG Sbjct: 154 YFNIIAVLGGWLFAQFFNHLSFGAFMNDFLSVLTFPYILMTILKSVIFGFVIAITASYEG 213 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIID 361 +V S + ++ VV SI V+I+D Sbjct: 214 MSVYRASTEVPQRTIKAVVISIFSVLILD 242 >gi|262370600|ref|ZP_06063925.1| toluene tolerance protein Ttg2B [Acinetobacter johnsonii SH046] gi|262314400|gb|EEY95442.1| toluene tolerance protein Ttg2B [Acinetobacter johnsonii SH046] Length = 259 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 61/199 (30%), Positives = 108/199 (54%), Gaps = 2/199 (1%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + QMY VGV + ++++ GAV+ Q L FG+E +++ LRE+ ++ Sbjct: 42 VYQMYRVGVLSLLIIVVSGLFIGAVLGLQMYSILVTFGSEAMLGTAVALTLLRELAPVVA 101 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+GSA+ AEIG MK E++ ++ +G+D ++ +ISPR+WA I SLP+L+++ Sbjct: 102 ALLFAGRAGSALTAEIGLMKATEQLSSMEMIGVDPLKRVISPRLWAGIFSLPMLSVIFAA 161 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTG-LIKAPFMACAIGIVAMKEGFA 334 I+G +V + ++S S+ ++ G +IK+ A +A+ +G+A Sbjct: 162 VGIMGGKMVGVDFLGADEGSYWSGIQSSVEFYKDVLNGTIIKSFVFALICTWIAVYQGYA 221 Query: 335 VGVHSNSLGKKVTTCVVQS 353 S + T VV S Sbjct: 222 CEPTSEGIATSTTRTVVYS 240 >gi|121593173|ref|YP_985069.1| hypothetical protein Ajs_0749 [Acidovorax sp. JS42] gi|222109932|ref|YP_002552196.1| hypothetical protein Dtpsy_0717 [Acidovorax ebreus TPSY] gi|120605253|gb|ABM40993.1| protein of unknown function DUF140 [Acidovorax sp. JS42] gi|221729376|gb|ACM32196.1| protein of unknown function DUF140 [Acidovorax ebreus TPSY] Length = 260 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 119/220 (54%), Gaps = 4/220 (1%) Query: 155 SLIR-QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIG 212 L+R Q++++G + ++ + G V+A QG L +G+ S+ L+ L L RE+G Sbjct: 42 GLVRDQVHFLGNYSLSIIAMSGLFVGFVLALQGYNVLQLYGSA-NSLGLVVTLGLVRELG 100 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 ++TA++ AGR+G+++ AEIG M+ E++ A+ M +D VR +++PR W +I++PLL + Sbjct: 101 PVVTALLFAGRAGTSLTAEIGLMRAGEQLSAMEMMAVDPVRRILAPRFWGGVIAMPLLAL 160 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331 + N +IG +V + F+ + S + ++ G++K+ A+ +A+ + Sbjct: 161 VFNAVGVIGGWLVGVVLIGVDGGAFWGQMQSGVDVWKDVGNGIVKSLAFGVAVTFIAVLQ 220 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 GF + + T VV + V+ +D + F+I Sbjct: 221 GFVAKPTPEGVSRATTRTVVMASLSVLGLDFVLTALMFSI 260 >gi|288942538|ref|YP_003444778.1| hypothetical protein Alvin_2840 [Allochromatium vinosum DSM 180] gi|288897910|gb|ADC63746.1| protein of unknown function DUF140 [Allochromatium vinosum DSM 180] Length = 259 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 63/217 (29%), Positives = 114/217 (52%), Gaps = 3/217 (1%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 L Q++ +GV + +V + G V+A QG + LSQFGA S+ +M L RE+G + Sbjct: 43 LWEQLFNIGVLSLLIVGVSGLFVGMVLALQGYYVLSQFGAA-ESLGVMVAASLVRELGPV 101 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA+++AGR+GSA+ AEIG MK E++ + M +D VR ++ PR ++S+PLL + Sbjct: 102 VTALLVAGRAGSALTAEIGLMKATEQLSGLEMMAVDPVRRILVPRFVGGVLSMPLLAAIF 161 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGF 333 + ++G V + ++S+ + ++ G+IK+ + VA+ +G+ Sbjct: 162 SAVGVLGGYFVGVGLLGVDEGAYWSQMQAKIDFDEDLVNGVIKSLAFGVVVTWVALFQGY 221 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV + +V+ +D + F Sbjct: 222 DTVPTSEGVSRSTTRAVVHAALVVLGLDFVLTALMFG 258 >gi|23014157|ref|ZP_00053989.1| COG0767: ABC-type transport system involved in resistance to organic solvents, permease component [Magnetospirillum magnetotacticum MS-1] Length = 258 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 60/216 (27%), Positives = 112/216 (51%), Gaps = 4/216 (1%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 ++R+ +G +PVV L + TG V+A Q S+F AE ++ + RE+ +L Sbjct: 43 ILREFVEIGYFSLPVVGLTAVFTGMVLALQSYSGFSRFAAEGAVATVVVLSVTRELAPVL 102 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 +M+AGR G+++ AEIG+M++ E+IDA+ T+ + + L++PRI A + LP L ++A+ Sbjct: 103 AGLMVAGRIGASMAAEIGTMRVTEQIDALTTLSTNPFKYLVAPRILAGTLMLPFLVLIAD 162 Query: 276 FSAIIGASIVIWKYYDIPF--AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 + G IV Y + F A + +R ++ +GL KA I ++ G+ Sbjct: 163 IIGVFGGYIV--GVYKLGFNSATYIARTWEFLEPLDVISGLTKAAVFGFLITLMGCYNGY 220 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G T VV + ++++ + + +F Sbjct: 221 YSKGGAQGVGAATTNAVVSAAIMILVFNYIITAMFF 256 >gi|167838138|ref|ZP_02464997.1| toluene tolerance ABC transporter, permease protein [Burkholderia thailandensis MSMB43] Length = 255 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 55/214 (25%), Positives = 118/214 (55%), Gaps = 1/214 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q++++G ++ + G V+ QG + L+++G+E L+++ +RE+G +++A Sbjct: 42 KQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVSA 101 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+++ AEIG MK E++ A+ M +D ++ +I+PR+WA +I++PLL + + Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPLKNVIAPRMWAGVIAMPLLAAIFSAV 161 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 ++G IV + F+S+ + A++ G++K+ A+ +A+ +G+ Sbjct: 162 GVLGGYIVGVLLIGVDPGAFWSQMQGGVEVWADVGNGVLKSVVFGFAVTFIALFQGYEAK 221 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + T VV + V+ +D L F+ Sbjct: 222 PTPEGVSHATTKTVVYASLAVLGLDFLLTALMFS 255 >gi|85860995|ref|YP_463197.1| ABC transporter permease [Syntrophus aciditrophicus SB] gi|85724086|gb|ABC79029.1| ABC transporter permease protein [Syntrophus aciditrophicus SB] Length = 381 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 92/376 (24%), Positives = 180/376 (47%), Gaps = 26/376 (6%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 V R +G+W + A+++ A+++ I + I D+ + D+ ++ F+ K Sbjct: 22 VLRLSGDWMANGRLPDAEEIRQALSQQIPAPRIIFDVVGLGAWDSG----LLIFLAKVFD 77 Query: 68 KIKLQGVSTH-------IEQLFSLISFT-HRKKIKNQKPQRSFFYN-SFKNLHYHIG-KK 117 + G+S + +L L S R + +K SF + L + G K Sbjct: 78 ICRGNGISVDSSGLPPGVCRLLELASPEKQRSGVTREKSPPSFLVRVADATLDFGRGFKD 137 Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 ++ F+ D+ +L ++ G F+ L LI Q G +P+V LIS + Sbjct: 138 MLAFVGDA--TLSVLRMLRGKPG--------FRRSDLILILQ--ETGAQALPIVSLISLL 185 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G ++A A QL FG +I+ D++ I +R +G ++T +++AGR+G+A A++G M++ Sbjct: 186 VGMILAFVAAIQLRMFGVQIYVADVVGIAMVRVMGAIMTGIIMAGRTGAAFAAQLGMMQV 245 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 NEEIDA+ +G+ V L+ PR+ AL++ +PLL I ++ ++G IV D+ + Sbjct: 246 NEEIDALEVLGVSPVDFLVLPRLLALMLMMPLLCIYSDLMGVVGGLIVGVGMLDLGVIEY 305 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + + +L + GL + + + G +++++G T+ VV I + Sbjct: 306 YHETVNAVSLTYFWIGLFHSFVFGVLVALAGCLRGLQCERNASAVGFAATSAVVTGIVSI 365 Query: 358 IIIDSLFAIFYFAIGI 373 ++ ++ + +GI Sbjct: 366 VVATAIITLLCQVLGI 381 >gi|42525131|ref|NP_970511.1| ABC-type organic solvent resistance transporter, permease protein. [Bdellovibrio bacteriovorus HD100] gi|39577342|emb|CAE81165.1| ABC-type organic solvent resistance transporter, permease protein [Bdellovibrio bacteriovorus HD100] Length = 259 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 53/204 (25%), Positives = 103/204 (50%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 Q++ V V P + F GA++ Q A Q+ +FGA + L + RE+G LL A Sbjct: 37 EQIWKVTVDSFPTTAMAGFFVGAIMTVQFAMQVKEFGALGYLGALATSATFREVGPLLIA 96 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 M++G+ G+ AE+G+MK+ E+IDA+R +G D ++ +I PR +I+S L Sbjct: 97 FMLSGKVGAFTSAELGTMKVTEQIDAVRCLGADPIQEIIVPRFVGIIVSSFFLLAAGLMM 156 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 ++ G ++ + + + + + +I +GL+K A + + +G+A Sbjct: 157 SVFGGMLLGELFAGVNYEEYLRHVPLIVSPVSILSGLVKCGTFAVVLATICTYQGYATTG 216 Query: 338 HSNSLGKKVTTCVVQSISIVIIID 361 + +G+ V V ++ ++++D Sbjct: 217 GAKGVGRAVVATAVTTMICIVVMD 240 >gi|73542805|ref|YP_297325.1| hypothetical protein Reut_A3121 [Ralstonia eutropha JMP134] gi|72120218|gb|AAZ62481.1| Protein of unknown function DUF140 [Ralstonia eutropha JMP134] Length = 258 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 54/213 (25%), Positives = 119/213 (55%), Gaps = 1/213 (0%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 Q+++VG + ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA+ Sbjct: 46 QIFFVGNLSLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVITAL 105 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 + AGR+G+++ AEIG MK E++ A+ M ++ ++ +I+PR WA ++++P+L + + Sbjct: 106 LFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVNPLQRVIAPRFWAGVVAMPVLAAIFSAVG 165 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 ++G +V + + F+S+ + + ++ G+IK+ A+ +A+ +GF Sbjct: 166 VLGGYLVGVQLIGVDAGAFWSQMQAGVDVRDDVVNGVIKSFIFGIAVTFIALYQGFEAKP 225 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D L F+ Sbjct: 226 TPEGVSRATTRTVVIASLAVLGLDFLLTALMFS 258 >gi|83311193|ref|YP_421457.1| ABC-type transport system involved in resistance to organic solvents [Magnetospirillum magneticum AMB-1] gi|82946034|dbj|BAE50898.1| ABC-type transport system involved in resistance to organic solvents [Magnetospirillum magneticum AMB-1] Length = 258 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 61/218 (27%), Positives = 116/218 (53%), Gaps = 8/218 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE--IFSIDLMSILQLREIGV 213 ++R+ +G +PVV L + TG V+A Q S+F AE + ++ ++S+ RE+ Sbjct: 43 ILREFIEIGYFSLPVVGLTAVFTGMVLALQSYSGFSRFAAEGAVATVVVLSVT--RELAP 100 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 +L +M+AGR G+++ AEIG+M++ E+IDA+ T+ + + L++PRI A + LP L ++ Sbjct: 101 VLAGLMVAGRIGASMAAEIGTMRVTEQIDALTTLSTNPFKYLVAPRILAGTLMLPFLVLI 160 Query: 274 ANFSAIIGASIVIWKYYDIPF--AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 A+ + G IV Y + F A + +R ++ +GL KA I ++ Sbjct: 161 ADIIGVFGGYIV--GVYKLGFNSATYIARTWEFLEPLDVISGLTKAAVFGFLITLMGCYN 218 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 G+ + +G T VV + ++++ + + +F Sbjct: 219 GYYSKGGAQGVGAATTNAVVSAAIMILVFNYVITAMFF 256 >gi|258546129|ref|ZP_05706363.1| membrane protein [Cardiobacterium hominis ATCC 15826] gi|258518554|gb|EEV87413.1| membrane protein [Cardiobacterium hominis ATCC 15826] Length = 263 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 73/246 (29%), Positives = 129/246 (52%), Gaps = 12/246 (4%) Query: 119 VKFINDSCSQAHILGLV-ISNTGEFCASSYKF--------KGFLLSLIRQMYYVGVSGVP 169 +KF++D + L ++ G+FC + + LL+L R Y GV +P Sbjct: 1 MKFVSDFLAAVGATTLACLAALGDFCLFALALLRHVAILLRKPLLTL-RATYAAGVLSLP 59 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++++ G V++ Q + +FGAE ++++ LRE+G +++A++ AGR+GSAI Sbjct: 60 IILVAGLFVGMVLSFQAYTTMVRFGAEQALGTMVALSLLRELGPVVSALLFAGRAGSAIT 119 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M ++ V + PR +LPLLTIL AIIGA +V Y Sbjct: 120 AEIGLMKTTEQLVAMEMMAIEPVAQVGVPRFLGAWFALPLLTILFVAVAIIGAHLVGVVY 179 Query: 290 YDIPFAVFFSRFHSTATL-ANIFTG-LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + +F+S ++ +++ G L+K+ +A+ +GF+ ++ + + T Sbjct: 180 LGLDDGIFWSGMQNSVDFGSDVVRGMLLKSLVFGWVCAAIAVFQGFSSLPTASGMSRATT 239 Query: 348 TCVVQS 353 T VV S Sbjct: 240 TTVVMS 245 >gi|224373004|ref|YP_002607376.1| abc transporter, permease protein [Nautilia profundicola AmH] gi|223589585|gb|ACM93321.1| abc transporter, permease protein [Nautilia profundicola AmH] Length = 259 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 65/213 (30%), Positives = 102/213 (47%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 + Q+ ++G + V+ L SF TG V A Q +FG E F + I +E+G + Sbjct: 44 IFEQINFMGFGSLGVIFLTSFFTGLVEAVQLYNGFHKFGVEDFMGYTIFISICKELGPVF 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A+M+ R SA AE+GSM++ E+IDA+ M +D + LI PRI IISLPLL + + Sbjct: 104 AALMVVSRGISAYAAELGSMRVTEQIDALDVMAVDSKQYLIVPRIIGTIISLPLLILFFD 163 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 A IGA ++ D+ + L + G++K I V G+ Sbjct: 164 AVANIGAYLISVYTLDVNGYTYIENIKQFGELGDFTEGIVKGIVFGYLISAVGTYIGYNT 223 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + +G T VV S ++ + D + + FY Sbjct: 224 RGGAKGVGVSTTKAVVISSILIFVADYIVSAFY 256 >gi|148360512|ref|YP_001251719.1| toluene tolerance protein Ttg2B [Legionella pneumophila str. Corby] gi|296106421|ref|YP_003618121.1| toluene tolerance protein [Legionella pneumophila 2300/99 Alcoy] gi|148282285|gb|ABQ56373.1| toluene tolerance protein Ttg2B [Legionella pneumophila str. Corby] gi|295648322|gb|ADG24169.1| toluene tolerance protein [Legionella pneumophila 2300/99 Alcoy] Length = 260 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 115/214 (53%), Gaps = 2/214 (0%) Query: 153 LLSLIR-QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211 L L+R Q+Y++GV ++++ + G V+ QG L +FGA L+++ RE+ Sbjct: 39 LWPLLRYQLYFIGVLSCLIIVVSALFIGMVVGLQGYNTLQKFGASSQLGQLLALSVAREL 98 Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271 G +++A++ AGR+GSA+ AEIG MK E++ ++ MG+D + ++ PR A I+LP+L Sbjct: 99 GPVISALLFAGRAGSALTAEIGLMKATEQLSSMDMMGVDPLGRVVYPRFAAGFIALPILA 158 Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMK 330 ++ + AI G + + + F+S + +I +G+IK+ A + +++ Sbjct: 159 LIFSAVAIYGGYFIGVYWLGVDAGSFWSNMQAAVNFRIDILSGIIKSLVFAFVVTWISVY 218 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +GF + + T VV S V+ +D L Sbjct: 219 QGFECVPTAEGISHATTKTVVYSSLAVLGLDFLL 252 >gi|238025995|ref|YP_002910226.1| ABC transporter inner membrane subunit [Burkholderia glumae BGR1] gi|237875189|gb|ACR27522.1| ABC transporter, inner membrane subunit [Burkholderia glumae BGR1] Length = 255 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 61/215 (28%), Positives = 119/215 (55%), Gaps = 3/215 (1%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLT 216 +Q++++G ++ + G V+ QG + L+++GAE S+ L+ L L RE+G ++T Sbjct: 42 KQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGAEQ-SLGLLVALSLVRELGPVVT 100 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+G+++ AEIG MK E++ A+ M +D ++ +I+PR+WA II++PLL+ + Sbjct: 101 ALLYAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPIKTVIAPRMWAGIIAMPLLSAIFCA 160 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTA-TLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 +IG +V + F+S+ +++ G++K+ A+ VA+ +G+ Sbjct: 161 VGVIGGYVVGVILIGVDPGAFWSQMQGGVDAWSDVGNGVLKSVVFGFAVTFVALYQGYEA 220 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D L F+ Sbjct: 221 KPTPEGVSRATTRTVVYASLAVLGLDFLLTALMFS 255 >gi|52841078|ref|YP_094877.1| toluene tolerance protein Ttg2B [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54293817|ref|YP_126232.1| hypothetical protein lpl0873 [Legionella pneumophila str. Lens] gi|54296863|ref|YP_123232.1| hypothetical protein lpp0904 [Legionella pneumophila str. Paris] gi|52628189|gb|AAU26930.1| toluene tolerance protein Ttg2B [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53750648|emb|CAH12055.1| hypothetical protein lpp0904 [Legionella pneumophila str. Paris] gi|53753649|emb|CAH15107.1| hypothetical protein lpl0873 [Legionella pneumophila str. Lens] gi|307609634|emb|CBW99138.1| hypothetical protein LPW_09231 [Legionella pneumophila 130b] Length = 260 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 115/214 (53%), Gaps = 2/214 (0%) Query: 153 LLSLIR-QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211 L L+R Q+Y++GV ++++ + G V+ QG L +FGA L+++ RE+ Sbjct: 39 LWPLLRYQLYFIGVLSCLIIVVSALFIGMVVGLQGYNTLQKFGASSQLGQLLALSVAREL 98 Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271 G +++A++ AGR+GSA+ AEIG MK E++ ++ MG+D + ++ PR A I+LP+L Sbjct: 99 GPVISALLFAGRAGSALTAEIGLMKATEQLSSMDMMGVDPLGRVVYPRFVAGFIALPILA 158 Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMK 330 ++ + AI G + + + F+S + +I +G+IK+ A + +++ Sbjct: 159 LIFSAVAIYGGYFIGVYWLGVDAGSFWSNMQAAVNFRIDILSGIIKSLVFAFVVTWISVY 218 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +GF + + T VV S V+ +D L Sbjct: 219 QGFECVPTAEGISHATTKTVVYSSLAVLGLDFLL 252 >gi|264676838|ref|YP_003276744.1| hypothetical protein CtCNB1_0702 [Comamonas testosteroni CNB-2] gi|299529658|ref|ZP_07043095.1| hypothetical protein CTS44_02750 [Comamonas testosteroni S44] gi|262207350|gb|ACY31448.1| hypothetical conserved protein [Comamonas testosteroni CNB-2] gi|298722521|gb|EFI63441.1| hypothetical protein CTS44_02750 [Comamonas testosteroni S44] Length = 258 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 59/215 (27%), Positives = 118/215 (54%), Gaps = 3/215 (1%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG-AEIFSIDLMSILQLREIGVLLTA 217 Q++++G + ++ + G V+ QG + L ++G AE + ++++ LRE+G ++TA Sbjct: 45 QIHFLGNYSLAIIGVSGLFVGFVLGLQGYYILQRYGSAEALGM-MVALSLLRELGPVVTA 103 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+A+ AEIG MK E++ A+ M +D V+ +++PR WA +I++PLL + + Sbjct: 104 LLFAGRAGTALTAEIGLMKAGEQLSAMEMMAVDPVKRILAPRFWAGLITMPLLAAVFSAV 163 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 ++G +V + F+ + +++ G++K+ A+ VA+ EG+A Sbjct: 164 GVLGGWLVGVVMIGVDSGAFWGQMQQGVDWWSDLGNGVLKSFVFGLAVTFVALLEGYAAK 223 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 + + T VV + V+ +D L F+I Sbjct: 224 PTPEGVSRATTRTVVVASLAVLGLDFLLTATMFSI 258 >gi|186684564|ref|YP_001867760.1| hypothetical protein Npun_F4449 [Nostoc punctiforme PCC 73102] gi|186467016|gb|ACC82817.1| protein of unknown function DUF140 [Nostoc punctiforme PCC 73102] Length = 218 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 60/213 (28%), Positives = 105/213 (49%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 ++ + G + V+L+S G + Q A +L +FGAE ++ RE+ +LT Sbjct: 1 MQHLVTAGPGSISPVLLVSGFAGMIFTIQTARELVRFGAENAVGGAFALAFCRELAPILT 60 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A ++AG+ GSA AEIG+M++ E+IDA+ + D + L+ PR+ A + +PL+TILA Sbjct: 61 ASIMAGQVGSAFAAEIGAMRVTEQIDALYMLKTDPIDYLVLPRVIACCLMVPLMTILALV 120 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + IIG +Y I F + +++F L+K + ++ G Sbjct: 121 TGIIGGVFAGSYFYKIIPETFLESVRNFLEPSDLFIILLKGFIFGVLVAVIGCSWGLTTK 180 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+ T VV S + I+D ++ F Sbjct: 181 GGAKEVGESATKAVVTSWVSIFIMDFFLSLLLF 213 >gi|268316272|ref|YP_003289991.1| hypothetical protein Rmar_0705 [Rhodothermus marinus DSM 4252] gi|262333806|gb|ACY47603.1| protein of unknown function DUF140 [Rhodothermus marinus DSM 4252] Length = 269 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 59/222 (26%), Positives = 111/222 (50%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G F ++ + LI QM G + + G V+A Q L++FGAE Sbjct: 34 GRFFRDVWRPPYEVRELINQMDEAGSKSFILTAVTGIAIGVVLAMQSRGTLARFGAEAVL 93 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 +++++ +EIG ++T++++AGR G+ + AEIGSM++ E+IDA+ L L+ R Sbjct: 94 PNMLALSVFKEIGPVITSLVLAGRLGAGMAAEIGSMRVTEQIDALEVAALKPFHYLVITR 153 Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319 + A I+ P+LT N A+ G + D+ + +F++ S+ +++ +K Sbjct: 154 VVACIVMFPVLTTWTNMIALAGGYVESVISADMDYRLFWNSAFSSLRFSDLIVDTLKTSV 213 Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 +GIV+ G+ V + +G+ VV S ++++ D Sbjct: 214 FGFLVGIVSCYLGYTVRGGTREVGQAAMQAVVISSLLILLAD 255 >gi|145219305|ref|YP_001130014.1| hypothetical protein Cvib_0490 [Prosthecochloris vibrioformis DSM 265] gi|145205469|gb|ABP36512.1| protein of unknown function DUF140 [Chlorobium phaeovibrioides DSM 265] Length = 264 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 65/213 (30%), Positives = 114/213 (53%), Gaps = 2/213 (0%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 K + + + Q G +P+V++ + G+++A + L FGA+ SI Sbjct: 40 KIRRYWRDFLDQAKICGADSIPIVLVSAISIGSLLAIEVGNLLEDFGAKTMLGRSTSISV 99 Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR-IWALIIS 266 +RE+G LL +M++ R GS AE+G+MKI+E+IDA+R G D + L+ PR + ALI+ Sbjct: 100 IRELGPLLMGLMLSARFGSRNGAELGAMKISEQIDALRAFGTDPIAKLVMPRLVAALIMF 159 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326 LP LT L++F+ + A+ + Y+ + +F++ + L + G KAP A I + Sbjct: 160 LP-LTALSDFAGLYSAAYMAEHYHHLDPGIFWNSVYPRLALKDFVVGFAKAPVFAVIITL 218 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 V+ GF+ + +G+ +V S +V+I Sbjct: 219 VSSFNGFSASGGTAGVGRSTIKGIVVSSGLVLI 251 >gi|149921451|ref|ZP_01909903.1| ABC-type transport system involved in resistance to organic solvents, permease component [Plesiocystis pacifica SIR-1] gi|149817654|gb|EDM77121.1| ABC-type transport system involved in resistance to organic solvents, permease component [Plesiocystis pacifica SIR-1] Length = 251 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 103/206 (50%), Gaps = 1/206 (0%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 VPV + ++ V GAVI+ QG FGAE + +RE L +VM+A ++GS+ Sbjct: 47 VPVGLAVAPV-GAVISLQGIAVFKLFGAERMLSAFLGTAIIREYSPALASVMVAAQAGSS 105 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A IG+MK+ +IDA+ M +D VR ++ P + A ++ PLL+++ N I+ I Sbjct: 106 IAARIGTMKVRGQIDALAVMSVDPVRYVVVPGVLACVLVTPLLSVVTNLLGILSGWIFAV 165 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + F + T +++ GL K +G++A G VG + +GK Sbjct: 166 PLGGVDHGAFMDNLTAQITPMDLWVGLGKCAVFGLGVGMIAGYLGLNVGRGAADVGKAAN 225 Query: 348 TCVVQSISIVIIIDSLFAIFYFAIGI 373 VV +I +++ D + ++ G+ Sbjct: 226 DTVVSTIVLILFTDYVVSMALLGAGL 251 >gi|159029293|emb|CAO90159.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 264 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 105/198 (53%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + QM VG + + ++ + G V Q A + FGA F ++S+ RE+ +LT Sbjct: 43 LEQMSIVGPESLTIALITAAFVGMVFTIQVAREFIFFGAGSFVGGVLSLALTRELAPVLT 102 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV++AGR GSA AEIG+M++ E+IDA+ + D + L+ PR+ A + LPLLTI++ Sbjct: 103 AVVVAGRVGSAFAAEIGTMRVTEQIDALYILKTDPIDYLVIPRVIACSLMLPLLTIISLV 162 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + ++G ++ Y + +++F + ++ + ++K+ I I+ G Sbjct: 163 TGLLGGLLISDSLYGVSYSLFLQSAQNFLQTWDLISSMLKSLIFGILIAIIGCSWGLTTT 222 Query: 337 VHSNSLGKKVTTCVVQSI 354 + +G+ TT VV S+ Sbjct: 223 GGAKGVGQSTTTAVVTSL 240 >gi|312795842|ref|YP_004028764.1| Toluene transport system permease [Burkholderia rhizoxinica HKI 454] gi|312167617|emb|CBW74620.1| Toluene transport system permease [Burkholderia rhizoxinica HKI 454] Length = 255 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 60/216 (27%), Positives = 121/216 (56%), Gaps = 1/216 (0%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 ++I+Q++++G + ++ + G V+ QG L+++G+E L+++ +RE+G + Sbjct: 39 TVIQQIHFLGNYSLVIIAVSGLFVGFVLGLQGYNTLNRYGSEQALGLLVALSLVRELGPV 98 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGR+G+++ AEIG MK E++ A+ M +D +R++++PR WA +I++P+L + Sbjct: 99 VTALLFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVDPIRVVVAPRFWAGVIAMPILAAIF 158 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGF 333 + I+G +V + F+S+ S L +I G+IK+ A+ VA+ +G+ Sbjct: 159 SAVGIVGGYVVGVVLIGVDPGAFWSQMQSGVDLRQDIGNGVIKSIVFGFAVTFVALFQGY 218 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + + T VV + V+ +D L F Sbjct: 219 EAKPTPEGVSRATTKTVVFASLAVLGLDFLLTALMF 254 >gi|300777429|ref|ZP_07087287.1| ABC superfamily ATP binding cassette transporter permease protein [Chryseobacterium gleum ATCC 35910] gi|300502939|gb|EFK34079.1| ABC superfamily ATP binding cassette transporter permease protein [Chryseobacterium gleum ATCC 35910] Length = 253 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 109/206 (52%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+ Q Y +G + ++ + F+ G V+ Q L ++G E ++ I +REI ++ Sbjct: 35 LLAQCYLIGYKSLGLISMTGFIIGLVLTMQLRPSLVRYGVESQLPVMVGIAIIREIAPVI 94 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++ AG+ S+I AE+GSM++ E+IDA+ G + L++ R+ A LP+L ILA+ Sbjct: 95 AALIFAGKIASSIGAELGSMRVTEQIDAMEVSGTHPFKYLVATRVLATTFMLPVLIILAD 154 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 ++ GA I + ++F+S+ + ++I IK+ F A+GIV +G+ Sbjct: 155 AISLYGAWIGVNIGGTTSLSLFYSQVFDSLDFSDIIPAFIKSFFFGFAVGIVGAYKGYNA 214 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361 + +G + VV S ++ ++D Sbjct: 215 VKGTRGVGNAANSAVVLSSILIFVLD 240 >gi|289207570|ref|YP_003459636.1| hypothetical protein TK90_0385 [Thioalkalivibrio sp. K90mix] gi|288943201|gb|ADC70900.1| protein of unknown function DUF140 [Thioalkalivibrio sp. K90mix] Length = 260 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 62/215 (28%), Positives = 111/215 (51%), Gaps = 1/215 (0%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 Q+Y VGV + ++I+ G V+ QG L FGA ++++ +RE+G ++TA+ Sbjct: 46 QIYSVGVRSLLIIIVSGLFVGMVLGYQGYITLVNFGAAEALGGVVALSLVRELGPVVTAL 105 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 + AGR+GSA+ AE+G MK E++ A+ M ++ R + +PR A +S+PLL + + Sbjct: 106 LFAGRAGSALTAELGLMKTTEQLSAMEMMAVNPYRRIFAPRFVAGFLSMPLLAAIFSAVG 165 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 ++G IV + +FS+ S ++ +G+IK+ + +A+ +GF Sbjct: 166 VMGGYIVGVGMLGVDSGAYFSQMQSVTDWNEDVLSGVIKSIVFGFVVTWIAVFQGFNAMP 225 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 S + + T VV S V+ +D + F G Sbjct: 226 TSEGISRATTQTVVVSSLAVLGLDFILTGLMFGTG 260 >gi|194334499|ref|YP_002016359.1| hypothetical protein Paes_1694 [Prosthecochloris aestuarii DSM 271] gi|194312317|gb|ACF46712.1| protein of unknown function DUF140 [Prosthecochloris aestuarii DSM 271] Length = 264 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 63/214 (29%), Positives = 112/214 (52%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 K + + + Q G +P+V++ S GA++A + L FGA+ ++ Sbjct: 40 KLRRYWRDFLDQATIAGTDSIPIVLVSSISIGALLAVEVGNLLEDFGAKTMLGRSTALSV 99 Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267 +RE+G LL +M++ R GS AE+G+MKI+E+IDA+R G D V L+ PR+ A +I Sbjct: 100 IRELGPLLMGLMLSARYGSRNGAELGAMKISEQIDALRAFGTDPVAKLVMPRLAAALIVF 159 Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327 LT +A+F+ + A+ + Y+ I +F++ L + G +KAP A I +V Sbjct: 160 IPLTAIADFAGLHSAAWLAEHYHKIDPGIFWNAVFPRLVLKDFVVGFLKAPVFAIIITLV 219 Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + GF+ + +G+ +V S +++I + Sbjct: 220 SSFNGFSATGGTAGVGRSTIKGIVVSSGLILIAN 253 >gi|148284291|ref|YP_001248381.1| ABC transporter permease protein [Orientia tsutsugamushi str. Boryong] gi|146739730|emb|CAM79561.1| ABC transporter permease protein [Orientia tsutsugamushi str. Boryong] Length = 301 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 114/202 (56%), Gaps = 5/202 (2%) Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTAVMIA 221 +G +P+V S +GAV+A Q ++ + I +I ++ + + RE+G ++ +++A Sbjct: 91 IGFYSLPIVAATSLCSGAVLALQ-TYEGVVRSSAIHAIPMIIVTSITRELGPVIVGLIVA 149 Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281 GR G++IVAEIG+M++ E+IDA+ T+ D ++ L++PR+ A +SLP L + ++ + G Sbjct: 150 GRIGASIVAEIGTMRVTEQIDALFTLATDPIKYLVTPRLVATTLSLPFLVLTSDVIGVFG 209 Query: 282 ASIV-IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 +V +++ + S H T ++ +GLIKA IGI + G+ + Sbjct: 210 GYLVSVYRLNFNSYEYIQSTIHH-LTSTDVISGLIKAIVFGMIIGITSCFHGYYSDKGAK 268 Query: 341 SLGKKVTTCVVQSISIVIIIDS 362 +G T VV S SI+I++ + Sbjct: 269 GVGIATTYGVVHS-SILILLSN 289 >gi|58584874|ref|YP_198447.1| ABC-type transport system involved in resistance to organic solvents, permease component [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419190|gb|AAW71205.1| ABC-type transport system involved in resistance to organic solvents, permease component [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 260 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 109/209 (52%), Gaps = 1/209 (0%) Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211 +L ++ +Q+ +G +P+V L GAVI Q + E L+++ ++E+ Sbjct: 43 YLGNIAKQIIEIGFFSLPIVGLTGIFIGAVIVLQSSLSGPLISPEQIIPKLVTVTIIKEL 102 Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271 G +L ++++ G+ GS+I AEIG+M+I E+IDA+ T+ ++ + LI+PRI A +I P+ T Sbjct: 103 GPVLISLIMVGKVGSSIAAEIGTMRITEQIDALTTLNINPFKYLIAPRILASVIVFPIFT 162 Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 I A+ I G I ++ ++ + N TGLIKA I + + Sbjct: 163 ICADLIGIFGGYITAVFKFNHNLNIYIKYTTQFFNMYNFITGLIKATAFGAIISVSSCYY 222 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIII 360 G+ + + T+ VV S SI+II+ Sbjct: 223 GYHCQEGARGVSIATTSTVVLS-SILIIL 250 >gi|293602880|ref|ZP_06685319.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292818674|gb|EFF77716.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 262 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 56/214 (26%), Positives = 116/214 (54%), Gaps = 1/214 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q++++G + ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA Sbjct: 48 QQVHFIGNYSLLIIAVSGMFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTA 107 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+++ AEIG MK E++ A+ M +D +R ++ PR+W II++P+L + + Sbjct: 108 LLFAGRAGTSLTAEIGLMKAGEQLSAMEMMAVDPIRRVLVPRLWGGIIAMPILAAVFSMV 167 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFAVG 336 ++G +V + F+S+ + + N + G+IK+ + +VA+ EG+ Sbjct: 168 GVLGGWVVGVLMIGVDAGAFWSQMQNGVDVWNDVANGVIKSVVFGITVTLVALYEGWQAK 227 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV V+ +D L F Sbjct: 228 PTPEGVARATTRTVVVGSLAVLGLDFLLTALMFG 261 >gi|89054229|ref|YP_509680.1| hypothetical protein Jann_1738 [Jannaschia sp. CCS1] gi|88863778|gb|ABD54655.1| protein of unknown function DUF140 [Jannaschia sp. CCS1] Length = 260 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 1/202 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 RQ +G +PVV L +F TG +A Q ++F AE +++I RE+G +L Sbjct: 47 RQFLTIGWLSLPVVGLTAFFTGGALALQIYAGGARFNAEAVVPQIVAISIARELGPVLGG 106 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +M+AGR +AI AEI +MK+ E+IDA+RT+ ++ L +PR+ A +SLP+L + + Sbjct: 107 LMVAGRVAAAIAAEIATMKVTEQIDALRTLSTHPMKYLTAPRLIAATLSLPVLVAVGDSI 166 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 I G +V D A + S T+ ++ +GL+K + ++ G G Sbjct: 167 GIFGGYLVSTSRLDFNPAAYLSNTRDFLTIRDVTSGLVKGAVFGFIVALMGCYHGMNSGR 226 Query: 338 HSNSLGKKVTTCVVQSISIVII 359 + +G+ T VV S SI+I+ Sbjct: 227 GARGVGRATTQAVV-SASILIL 247 >gi|221069030|ref|ZP_03545135.1| protein of unknown function DUF140 [Comamonas testosteroni KF-1] gi|220714053|gb|EED69421.1| protein of unknown function DUF140 [Comamonas testosteroni KF-1] Length = 258 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 58/215 (26%), Positives = 118/215 (54%), Gaps = 3/215 (1%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG-AEIFSIDLMSILQLREIGVLLTA 217 Q++++G + ++ + G V+ QG + L ++G AE + ++++ LRE+G ++TA Sbjct: 45 QIHFLGNYSLAIIGVSGLFVGFVLGLQGYYILQRYGSAEALGM-MVALSLLRELGPVVTA 103 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+A+ AEIG MK E++ A+ M +D V+ +++PR WA +I++PLL + + Sbjct: 104 LLFAGRAGTALTAEIGLMKAGEQLSAMEMMAVDPVKRILAPRFWAGLITMPLLAAVFSAV 163 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 ++G +V + F+ + +++ G++K+ A+ VA+ +G+A Sbjct: 164 GVLGGWLVGVVMIGVDSGAFWGQMQQGVDWWSDLGNGVLKSFVFGLAVTFVALLQGYAAK 223 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 + + T VV + V+ +D L F+I Sbjct: 224 PTPEGVSRATTRTVVVASLAVLGLDFLLTATMFSI 258 >gi|88811866|ref|ZP_01127119.1| hypothetical protein NB231_05736 [Nitrococcus mobilis Nb-231] gi|88790750|gb|EAR21864.1| hypothetical protein NB231_05736 [Nitrococcus mobilis Nb-231] Length = 258 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 61/216 (28%), Positives = 110/216 (50%), Gaps = 3/216 (1%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 +I Q+Y GV + ++++ G V+ QG L FGAE S+ ++ L L RE+G + Sbjct: 43 VITQIYATGVLSLLIIVVSGLFVGMVLGLQGYNTLVNFGAEQ-SLGVLVALSLTRELGPV 101 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 ++A++ +GR+GSA+ AEIG MK E++ + M +D R +++PR+ +I+LPLL + Sbjct: 102 VSALLFSGRAGSALTAEIGLMKATEQLSGMEMMAVDPERRVVAPRLLGGMIALPLLAAIF 161 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGF 333 + G V + ++S+ + + ++ G+IK+ + A+ EGF Sbjct: 162 TLVGVFGGYFVGTVLLGVDSGAYWSQMQAQVSFTDDVVNGVIKSLVFGFVVSWTAVFEGF 221 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 S + + T VV S V+ +D + F Sbjct: 222 DCAPTSEGVSRATTRAVVHSSLAVLGLDFILTALMF 257 >gi|149925791|ref|ZP_01914055.1| ABC-type transporter, permease component involved in toluene tolerance [Limnobacter sp. MED105] gi|149825908|gb|EDM85116.1| ABC-type transporter, permease component involved in toluene tolerance [Limnobacter sp. MED105] Length = 261 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 60/217 (27%), Positives = 119/217 (54%), Gaps = 1/217 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +I Q++++G + ++++ G V+ QG + L+++GAE L+++ +RE+G ++ Sbjct: 45 VIDQIHFIGNYSLVIIVVSGLFVGFVLGLQGYYTLNRYGAEQALGLLVALSLVRELGPVV 104 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 +A++ AGR+G+++ AEIG MK E++ A+ M +D +++PR A +ISLPLL L + Sbjct: 105 SALLFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVDPKARIVAPRWIAGLISLPLLAGLFS 164 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 I G +V + F+S+ + + +I G+IK+ A+ +A+ +G+A Sbjct: 165 AVGIFGGYVVGVLLIGVDSGAFWSQMQAGVDVRDDILNGVIKSVVFGVAVSSIALFQGYA 224 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 + + T VV S ++ +D + F+I Sbjct: 225 CQPTPEGVSRATTRTVVISSLTILGLDFVLTALMFSI 261 >gi|302828760|ref|XP_002945947.1| hypothetical protein VOLCADRAFT_72591 [Volvox carteri f. nagariensis] gi|300268762|gb|EFJ52942.1| hypothetical protein VOLCADRAFT_72591 [Volvox carteri f. nagariensis] Length = 348 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 55/214 (25%), Positives = 114/214 (53%), Gaps = 2/214 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + Q+ VG + + V +L + G V Q + ++ G ++++ RE+ ++T Sbjct: 125 VEQLRLVGPASLGVSLLTAGFVGMVFTIQFVREFAKLGLTRSVGGVLALALSRELTPVVT 184 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A+++AGR GSA AE+G+M+++E++D++R + D V L++PR+ A +I+ P+L +L F Sbjct: 185 AIILAGRVGSAFAAELGTMQVSEQMDSLRVLFTDPVDYLVTPRVLASMIAGPILNVLC-F 243 Query: 277 SAIIGASIVIWKY-YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 +GA++++ Y++P V T ++ T ++K+ + ++ GF Sbjct: 244 CMGMGAAVLLADLVYNVPANVIVDSARRALTSYDVLTSMVKSWVFGTVVATISCAWGFTT 303 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+ T+ VV S+ + I D + +F Sbjct: 304 SGGAKGVGESTTSAVVISLVTIFIADFFLSFIFF 337 >gi|116747850|ref|YP_844537.1| hypothetical protein Sfum_0402 [Syntrophobacter fumaroxidans MPOB] gi|116696914|gb|ABK16102.1| protein of unknown function DUF140 [Syntrophobacter fumaroxidans MPOB] Length = 258 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 52/205 (25%), Positives = 107/205 (52%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + Q+ ++G + ++ + + TG V+A + L E L+++ +RE+G +L+ Sbjct: 46 LEQIVFIGAKSLIIIFVTALSTGMVLALEALHMLRGGATENILGALVALSIVRELGPVLS 105 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A+++ GR+GSA+ AEIG M++ E+IDA+ M ++ ++ +++P+I A ++S+P+L + Sbjct: 106 ALIVTGRAGSAMTAEIGIMRLTEQIDALEMMAVNPIKHVVTPKIVAGVVSMPVLCAFFDV 165 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 I+G V Y +P FF ++ GL K+ A+ + G+ Sbjct: 166 VGILGGYFVGVVIYGVPEVHFFGGMTKAVAYLDVAGGLFKSAVFGLAMSWICSMMGYGAA 225 Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361 + + + T VV + V+++D Sbjct: 226 ATAEGVSRATTNAVVITSIAVLVLD 250 >gi|113954700|ref|YP_731394.1| transporter membrane component [Synechococcus sp. CC9311] gi|113882051|gb|ABI47009.1| possible transporter, membrane component [Synechococcus sp. CC9311] Length = 248 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 67/231 (29%), Positives = 111/231 (48%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G+ +++ K + + L Q+ G +VI+ + G V Q +L+ GA Sbjct: 18 GQAVSATTKGRINTIDLFDQLQEAGPGSFLIVIITALAAGTVFNIQITAELNSMGAGSTV 77 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 +++I REI LLTA ++ G+ +A A++G+MK+ E+IDAI + D V L+ PR Sbjct: 78 GGVLAIGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTDPVEYLVVPR 137 Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319 + A+++ P+ +L AI A I Y IP AVF++ + T ++ LIKA Sbjct: 138 LIAMVVMAPVQCLLFFGVAIWSAQISSTNLYSIPPAVFWTAVRTWLTPDDLPFMLIKALV 197 Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 IG++A G + +G T VV + V ++D L F Sbjct: 198 FGLQIGVIACGWGMTTKGGAKEVGTSTTGAVVMILVSVALMDVLLTQILFG 248 >gi|15223672|ref|NP_173410.1| TGD1 (TRIGALACTOSYLDIACYLGLYCEROL 1); lipid transporter [Arabidopsis thaliana] gi|42571555|ref|NP_973868.1| TGD1 (TRIGALACTOSYLDIACYLGLYCEROL 1); lipid transporter [Arabidopsis thaliana] gi|42571557|ref|NP_973869.1| TGD1 (TRIGALACTOSYLDIACYLGLYCEROL 1); lipid transporter [Arabidopsis thaliana] gi|75153743|sp|Q8L4R0|TGD1_ARATH RecName: Full=Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic; AltName: Full=ABC transporter I family member 14; Short=ABC transporter ABCI.14; Short=AtABCI14; Flags: Precursor gi|20465620|gb|AAM20141.1| unknown protein [Arabidopsis thaliana] gi|21281062|gb|AAM45069.1| unknown protein [Arabidopsis thaliana] gi|45680900|gb|AAS75319.1| permease-like protein [Arabidopsis thaliana] gi|222424205|dbj|BAH20061.1| AT1G19800 [Arabidopsis thaliana] gi|332191778|gb|AEE29899.1| trigalactosyldiacylglycerol 1 [Arabidopsis thaliana] gi|332191779|gb|AEE29900.1| trigalactosyldiacylglycerol 1 [Arabidopsis thaliana] gi|332191780|gb|AEE29901.1| trigalactosyldiacylglycerol 1 [Arabidopsis thaliana] Length = 350 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 52/213 (24%), Positives = 108/213 (50%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 ++Q+ G + V +L S G Q + ++ G ++++ RE+ ++T Sbjct: 127 LQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFTRLGLNRSIGGVLALAFSRELSPVIT 186 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 ++++AGR GSA AE+G+M+++E+ D +R +G D + LI+PR+ A ++LP LT++ Sbjct: 187 SIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADPIDYLITPRVIASCLALPFLTLMCFT 246 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + ++++ Y I + H +I + +IK+ I +++ G Sbjct: 247 VGMASSALLSDAVYGISINIIMDSAHRALRPWDIVSAMIKSQVFGAIISVISCSWGVTTT 306 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+ T+ VV S+ + I D + + F+F Sbjct: 307 GGAKGVGESTTSAVVMSLVGIFIADFVLSSFFF 339 >gi|330444642|ref|YP_004377628.1| ABC transporter permease [Chlamydophila pecorum E58] gi|328807752|gb|AEB41925.1| ABC transporter, permease protein [Chlamydophila pecorum E58] Length = 271 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 55/150 (36%), Positives = 89/150 (59%), Gaps = 3/150 (2%) Query: 146 SYKFKGFLL-SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204 S+ FK L ++ Q Y +GVS +PVVIL +TG V+A Q +QL +G +I Sbjct: 44 SFSFKKCLFHAVCVQGYAIGVSSLPVVILTGVITGVVLALQSYYQLGVYGLSC-AIGFFV 102 Query: 205 ILQ-LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263 + L EIG +LTA+ ++GR G AI A +G++++ E+I A+ ++G++ + PRI A Sbjct: 103 VKSILVEIGPVLTALALSGRVGGAIAAFLGTLRMTEQISAMSSLGVNPLEYFALPRIIAG 162 Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIP 293 II++P L I+A +S I ++ + IP Sbjct: 163 IITMPALVIIAVWSGIFSGYMICRYAFQIP 192 >gi|325927586|ref|ZP_08188818.1| putative integral membrane protein [Xanthomonas perforans 91-118] gi|325542051|gb|EGD13561.1| putative integral membrane protein [Xanthomonas perforans 91-118] Length = 249 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 43/126 (34%), Positives = 75/126 (59%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 S + F+ L+R++Y VG +P++ + G V+ QG L+ +GA L+ + Sbjct: 24 SLPTRDFMAELVREIYKVGARSLPIIAVGGAFVGLVLTLQGYRTLTTYGASDALSTLLGL 83 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ M +D V ++PR WA ++ Sbjct: 84 SLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKALELMAIDPVAKAVAPRFWAAVL 143 Query: 266 SLPLLT 271 ++PLLT Sbjct: 144 TVPLLT 149 >gi|189184336|ref|YP_001938121.1| toluene export ABC transporter permease protein [Orientia tsutsugamushi str. Ikeda] gi|189181107|dbj|BAG40887.1| toluene export ABC transporter permease protein [Orientia tsutsugamushi str. Ikeda] Length = 288 Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 60/202 (29%), Positives = 114/202 (56%), Gaps = 5/202 (2%) Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTAVMIA 221 +G +P+V S +GAV+A Q ++ + I +I ++ + + RE+G ++ +++A Sbjct: 78 IGFYSLPIVAATSLCSGAVLALQ-TYEGVVRSSAIHAIPMIIVTSITRELGPVIVGLIVA 136 Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281 GR G+++VAEIG+M++ E+IDA+ T+ D ++ L++PR+ A +SLP L + ++ + G Sbjct: 137 GRIGASMVAEIGTMRVTEQIDALFTLATDPIKYLVTPRLVATTLSLPFLVLTSDVIGVFG 196 Query: 282 ASIV-IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 +V +++ + S H T ++ +GLIKA IGI + G+ + Sbjct: 197 GYLVSVYRLNFNSYEYIQSTIHH-LTSNDVISGLIKAIVFGMIIGITSCFHGYYSDKGAK 255 Query: 341 SLGKKVTTCVVQSISIVIIIDS 362 +G T VV S SI+I++ + Sbjct: 256 GVGIATTYGVVHS-SILILLSN 276 >gi|62185216|ref|YP_220001.1| putative permease component of ABC transporter [Chlamydophila abortus S26/3] gi|62148283|emb|CAH64049.1| putative permease component of ABC transporter [Chlamydophila abortus S26/3] Length = 261 Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 109/215 (50%), Gaps = 2/215 (0%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ-LREIGVLLTA 217 Q Y +GV+ +PVVIL VTG V+A Q +QL G +I + L EIG +LTA Sbjct: 47 QGYDIGVASLPVVILTGAVTGIVLALQSCYQLGIHGLSC-AIGFFVVKSILVEIGPVLTA 105 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 + ++GR G AI A +G+M++ E++ A+ T+G++ + PRI A I++P L I A +S Sbjct: 106 LALSGRVGGAISAFLGTMRMTEQVSAMETLGVNPLAYFALPRIIAGTIAMPALVIAAVWS 165 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 I G ++ + +P V+ +++I ++K+ I +A +G Sbjct: 166 GIFGGYLLCRYAFQLPAQVYLHMVSGNVFISDIVMVIVKSLVFGFIITSLACYQGLGKHC 225 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 + K T VV S ++ + + F+ +G Sbjct: 226 RITDVAKVTTAGVVTSYISILFANCVITAFFHVLG 260 >gi|190576453|ref|YP_001974298.1| putative transmembrane component of ABC transporter protein [Stenotrophomonas maltophilia K279a] gi|254522804|ref|ZP_05134859.1| toluene tolerance protein [Stenotrophomonas sp. SKA14] gi|190014375|emb|CAQ48023.1| putative transmembrane component of ABC transporter protein [Stenotrophomonas maltophilia K279a] gi|219720395|gb|EED38920.1| toluene tolerance protein [Stenotrophomonas sp. SKA14] Length = 249 Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 44/126 (34%), Positives = 74/126 (58%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 S + FL L R++Y +G +P++ + G V+ QG L+ FGA L+ + Sbjct: 24 SLPTRDFLAELTREIYKIGARSLPIIAVGGAFVGLVLTLQGYRTLTTFGAADALSTLLGL 83 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ M +D V ++PR WA ++ Sbjct: 84 SLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKALELMAIDPVAKAVAPRFWAAVL 143 Query: 266 SLPLLT 271 ++PLLT Sbjct: 144 TVPLLT 149 >gi|126727195|ref|ZP_01743032.1| ABC transporter, inner membrane subunit [Rhodobacterales bacterium HTCC2150] gi|126703623|gb|EBA02719.1| ABC transporter, inner membrane subunit [Rhodobacterales bacterium HTCC2150] Length = 258 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 59/212 (27%), Positives = 107/212 (50%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 + + +G +PVV L + TG +A Q ++F AE ++SI +RE+G +L+ Sbjct: 45 QALLNIGFFSLPVVGLTALFTGGALALQIYAGGARFNAEAVVPSIVSIGMVRELGPVLSG 104 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +M+AGR ++I AE+ SMK+ E+IDA+ T+ + ++ L PR+ A ++LP+L + + Sbjct: 105 LMVAGRVSASIAAELASMKVTEQIDALVTLSSNPLKYLAVPRVLAATLTLPILVAVGDSI 164 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 I G +V D A + + L ++ +GLIK + I+ G G Sbjct: 165 GIFGGYLVGVNSLDFNAAGYLKNTVTFLELWDVTSGLIKGAVFGFILSIMGCYHGMNSGR 224 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+ VV S +++ + L +F Sbjct: 225 GAQGVGRATINAVVSSSILILAANYLLTSLFF 256 >gi|146328846|ref|YP_001209755.1| hypothetical protein DNO_0858 [Dichelobacter nodosus VCS1703A] gi|146232316|gb|ABQ13294.1| conserved hypothetical membrane protein [Dichelobacter nodosus VCS1703A] Length = 262 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 65/217 (29%), Positives = 120/217 (55%), Gaps = 2/217 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I+ +++ GV +P++++ G V+A Q +S FGAE + L+++ +RE+G ++T Sbjct: 46 IKALFHAGVLSLPIIMVSGLFVGMVLALQAFINMSLFGAEQSTSTLVALSLMRELGSVVT 105 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++ AGR+GSAI AEIG MK E++DA+ MG++ + + PR + +++LPLL I+ Sbjct: 106 ALLFAGRAGSAITAEIGLMKTTEQLDAMTMMGVEPLAQIGVPRFFGALLALPLLAIIFVA 165 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFH-STATLANIFTGL-IKAPFMACAIGIVAMKEGFA 334 +A++GA V + + +F+S+ NI G+ +K+ +++ +GF Sbjct: 166 TAMVGAYWVAVPHLGLDNGIFWSQLQRGVGFYQNIVLGIGVKSLVFGWLCAAISVFQGFV 225 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 + + + T VV S V+ +D L FA+ Sbjct: 226 CVPTAQGMAQATTKTVVLSSLAVLAVDFLLTSLMFAL 262 >gi|296114211|ref|ZP_06832866.1| ABC transporter permease protein [Gluconacetobacter hansenii ATCC 23769] gi|295979287|gb|EFG86010.1| ABC transporter permease protein [Gluconacetobacter hansenii ATCC 23769] Length = 261 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 62/221 (28%), Positives = 117/221 (52%), Gaps = 9/221 (4%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 IG+ ++ + + Q + GL+ + ++ F SLI Y+ +PVV L Sbjct: 11 IGRTLLDMVRMA-GQVALFGLL--AVSHLVRPPFYWRTFCGSLIEIGYF----SLPVVAL 63 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 + +G VIA Q +Q+ A+ ++ + RE+G +L +M+AGR G+A+ AEIG Sbjct: 64 TALFSGGVIALQSYTGFAQYHAQSAIAGIVILAVTRELGPVLAGLMVAGRVGAAMSAEIG 123 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV-IWKYYDI 292 +M++ +IDA+ T+ + ++ L++PR+ A ++LP L I+A+ ++G IV + K + Sbjct: 124 TMRVTNQIDALSTLSTNPIKYLVTPRLLAGTLALPFLVIIADILGVMGGFIVCVMKLNFV 183 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 P A + S ++ + ++ GL KA I ++ G+ Sbjct: 184 PQA-YISATIASFRMMDVTVGLAKAAIFGFLIALMGCYHGY 223 >gi|194367789|ref|YP_002030399.1| hypothetical protein Smal_4017 [Stenotrophomonas maltophilia R551-3] gi|194350593|gb|ACF53716.1| protein of unknown function DUF140 [Stenotrophomonas maltophilia R551-3] Length = 249 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 44/126 (34%), Positives = 74/126 (58%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 S + FL L R++Y +G +P++ + G V+ QG L+ FGA L+ + Sbjct: 24 SLPTRDFLAELTREIYKIGARSLPIIAVGGAFVGLVLTLQGYRTLTTFGAADALSTLLGL 83 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ M +D V ++PR WA ++ Sbjct: 84 SLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKALELMAIDPVAKAVAPRFWAAVL 143 Query: 266 SLPLLT 271 ++PLLT Sbjct: 144 TVPLLT 149 >gi|297844946|ref|XP_002890354.1| hypothetical protein ARALYDRAFT_472206 [Arabidopsis lyrata subsp. lyrata] gi|297336196|gb|EFH66613.1| hypothetical protein ARALYDRAFT_472206 [Arabidopsis lyrata subsp. lyrata] Length = 350 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 52/213 (24%), Positives = 108/213 (50%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 ++Q+ G + V +L S G Q + ++ G ++++ RE+ ++T Sbjct: 127 LQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFTRLGLNRSIGGVLALAFSRELSPVIT 186 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 ++++AGR GSA AE+G+M+++E+ D +R +G D + LI+PR+ A ++LP LT++ Sbjct: 187 SIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADPIDYLITPRVIASCLALPFLTLMCFT 246 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + ++++ Y I + H +I + +IK+ I +++ G Sbjct: 247 VGMASSALLSDAVYGISINIIMDSAHRALRPWDIVSAMIKSQVFGAIISVISCSWGVTTT 306 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+ T+ VV S+ + I D + + F+F Sbjct: 307 GGAKGVGESTTSAVVMSLVGIFIADFVLSSFFF 339 >gi|78050007|ref|YP_366182.1| ABC transporter permease [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78038437|emb|CAJ26182.1| ABC transporter permease [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 249 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 43/126 (34%), Positives = 75/126 (59%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 S + F+ L+R++Y VG +P++ + G V+ QG L+ +GA L+ + Sbjct: 24 SLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTLQGYRTLTTYGASDALSTLLGL 83 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ M +D V ++PR WA ++ Sbjct: 84 SLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKALELMAIDPVAKAVAPRFWAAVL 143 Query: 266 SLPLLT 271 ++PLLT Sbjct: 144 TVPLLT 149 >gi|21245052|ref|NP_644634.1| toluene tolerance protein [Xanthomonas axonopodis pv. citri str. 306] gi|294627465|ref|ZP_06706049.1| toluene tolerance protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294664971|ref|ZP_06730282.1| toluene tolerance protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|21110783|gb|AAM39170.1| toluene tolerance protein [Xanthomonas axonopodis pv. citri str. 306] gi|292598286|gb|EFF42439.1| toluene tolerance protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292605249|gb|EFF48589.1| toluene tolerance protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 249 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 43/126 (34%), Positives = 75/126 (59%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 S + F+ L+R++Y VG +P++ + G V+ QG L+ +GA L+ + Sbjct: 24 SLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTLQGYRTLTTYGASDALSTLLGL 83 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ M +D V ++PR WA ++ Sbjct: 84 SLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKALELMAIDPVAKAVAPRFWAAVL 143 Query: 266 SLPLLT 271 ++PLLT Sbjct: 144 TVPLLT 149 >gi|325915573|ref|ZP_08177883.1| hypothetical integral membrane protein [Xanthomonas vesicatoria ATCC 35937] gi|325538211|gb|EGD09897.1| hypothetical integral membrane protein [Xanthomonas vesicatoria ATCC 35937] Length = 249 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 43/126 (34%), Positives = 75/126 (59%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 S + F+ L+R++Y VG +P++ + G V+ QG L+ +GA L+ + Sbjct: 24 SLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTLQGYRTLTTYGASDALSTLLGL 83 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ M +D V ++PR WA ++ Sbjct: 84 SLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKALELMAIDPVAKAVAPRFWAAVL 143 Query: 266 SLPLLT 271 ++PLLT Sbjct: 144 TVPLLT 149 >gi|188579086|ref|YP_001916015.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae PXO99A] gi|188523538|gb|ACD61483.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 249 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 55/189 (29%), Positives = 98/189 (51%), Gaps = 1/189 (0%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 S + F+ L+R++Y VG +P++ + G V+ QG L+ +GA L+ + Sbjct: 24 SLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTLQGYRTLTTYGASDALSTLLGL 83 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ M +D V ++PR WA ++ Sbjct: 84 SLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKALELMAIDPVAKAVAPRFWAAVL 143 Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF-TGLIKAPFMACAI 324 ++PLLT + AI G + I F+S ++ + + F ++K+ Sbjct: 144 TVPLLTGVFCSLAITGGYVEAVHVLGIDNGTFWSGLSNSVDVWDDFGVAMLKSAIFGGTT 203 Query: 325 GIVAMKEGF 333 +VA GF Sbjct: 204 ALVAAYVGF 212 >gi|282899746|ref|ZP_06307709.1| protein of unknown function DUF140 [Cylindrospermopsis raciborskii CS-505] gi|281195361|gb|EFA70295.1| protein of unknown function DUF140 [Cylindrospermopsis raciborskii CS-505] Length = 264 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 111/208 (53%), Gaps = 1/208 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + Q+ VG + + +L + GAV Q A + FGA ++++ RE+ +LT Sbjct: 42 LEQLAVVGPDSLFIALLTAIFVGAVFTIQVAREFINFGAGNLVGGVLAVALTRELSPVLT 101 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV++AGR GSA AEIG+M++ E+IDA+ + D + L+ PR+ A ++ LP+LT+L+ Sbjct: 102 AVILAGRVGSAFAAEIGTMRVTEQIDALLMLKTDPIDFLVIPRLLACLLMLPILTLLSLV 161 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + + G I+ Y++ VF + L +I + +IKA I I+ G Sbjct: 162 TGMWGGLIIATNLYNLSDTVFLDSARNFLDLRDITSAMIKAACFGILIAIIGCSWGLTTT 221 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + +G+ TT VV ++ +VI I + F Sbjct: 222 GGAKGVGQSTTTAVVTAL-LVIFISNFF 248 >gi|166710003|ref|ZP_02241210.1| ABC transporter permease [Xanthomonas oryzae pv. oryzicola BLS256] Length = 249 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 43/126 (34%), Positives = 75/126 (59%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 S + F+ L+R++Y VG +P++ + G V+ QG L+ +GA L+ + Sbjct: 24 SLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTLQGYRTLTTYGASDALSTLLGL 83 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ M +D V ++PR WA ++ Sbjct: 84 SLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKALELMAIDPVAKAVAPRFWAAVL 143 Query: 266 SLPLLT 271 ++PLLT Sbjct: 144 TVPLLT 149 >gi|188993823|ref|YP_001905833.1| putative transporter [Xanthomonas campestris pv. campestris str. B100] gi|167735583|emb|CAP53801.1| putative transporter [Xanthomonas campestris pv. campestris] Length = 249 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 43/126 (34%), Positives = 75/126 (59%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 S + F+ L+R++Y VG +P++ + G V+ QG L+ +GA L+ + Sbjct: 24 SLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTLQGYRTLTTYGASDALSTLLGL 83 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ M +D V ++PR WA ++ Sbjct: 84 SLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKALELMAIDPVAKAVAPRFWAAVL 143 Query: 266 SLPLLT 271 ++PLLT Sbjct: 144 TVPLLT 149 >gi|319788633|ref|YP_004148108.1| hypothetical protein Psesu_3054 [Pseudoxanthomonas suwonensis 11-1] gi|317467145|gb|ADV28877.1| protein of unknown function DUF140 [Pseudoxanthomonas suwonensis 11-1] Length = 249 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 74/127 (58%) Query: 145 SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204 +S + FL L R+ Y +G +P++ + G V+ QG L+ FGA L+ Sbjct: 23 ASLPSRDFLAELARETYKIGGRSLPIIAVGGAFVGLVLTLQGYRTLTTFGAADALSTLLG 82 Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264 + RE+G +LTA++ GR+GS+I AE+G M+ ++I A+ M +D V ++PR WA + Sbjct: 83 LSLYRELGPVLTALLFIGRAGSSIAAELGLMRATDQIKALELMAIDPVAKAVAPRFWAAV 142 Query: 265 ISLPLLT 271 + +PLLT Sbjct: 143 LCVPLLT 149 >gi|289662322|ref|ZP_06483903.1| toluene tolerance protein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 249 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 43/126 (34%), Positives = 75/126 (59%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 S + F+ L+R++Y VG +P++ + G V+ QG L+ +GA L+ + Sbjct: 24 SLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTLQGYRTLTTYGASDALSTLLGL 83 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ M +D V ++PR WA ++ Sbjct: 84 SLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKALELMAIDPVAKAVAPRFWAAVL 143 Query: 266 SLPLLT 271 ++PLLT Sbjct: 144 TVPLLT 149 >gi|29840386|ref|NP_829492.1| ABC transporter, permease protein, putative [Chlamydophila caviae GPIC] gi|29834735|gb|AAP05370.1| ABC transporter, permease protein, putative [Chlamydophila caviae GPIC] Length = 263 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 68/230 (29%), Positives = 116/230 (50%), Gaps = 3/230 (1%) Query: 144 ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203 + S+K K S+ Q Y +GV+ +PVV+L VTG V+A Q +QL G +I Sbjct: 35 SCSWK-KSLFRSVSLQGYDIGVASLPVVMLTGAVTGIVLALQSYYQLGIHGLSC-AIGFF 92 Query: 204 SILQ-LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 + L EIG +LTA+ ++GR G AI A +G+M++ E++ A+ T+G++ + PRI A Sbjct: 93 VVKSILVEIGPVLTALALSGRVGGAISAFLGTMRMTEQVSAMETLGVNPLEYFALPRIIA 152 Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322 II++P L I A +S I ++ + +P V+ L++I ++K+ Sbjct: 153 GIIAMPALVIAAVWSGIFCGYLLCRYAFQLPAQVYLHMVSGNVLLSDIVMVIVKSLVFGF 212 Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 I +A +G + K T VV S ++ + + F+ +G Sbjct: 213 IITSLACYQGLGKHCRITDVAKVTTAGVVTSYISILFANCVITSFFHVLG 262 >gi|269128543|ref|YP_003301913.1| hypothetical protein Tcur_4348 [Thermomonospora curvata DSM 43183] gi|268313501|gb|ACY99875.1| protein of unknown function DUF140 [Thermomonospora curvata DSM 43183] Length = 285 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 67/249 (26%), Positives = 122/249 (48%), Gaps = 9/249 (3%) Query: 131 ILGLVISNTGEF---CASSYK--FKGFL--LSLIRQMYY-VGVSGVPVVILISFVTGAVI 182 +L + + G F C +++ FK L I Q ++ V V+ +P +L++ GA++ Sbjct: 32 LLNITVKEPGRFFALCLDAFRAMFKRPLQWREFIEQAWFIVSVTAIPT-MLVAIPFGAIL 90 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + Q + Q GA+ F+ + +RE L+TA++IAG +GSA+ A+IGS KI EEID Sbjct: 91 SLQVGGLIRQLGAQSFTGATAVVAIVREASPLVTALLIAGAAGSAMCADIGSRKIREEID 150 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +G++ + L+ PR+WA L L + ++G D + + F+ Sbjct: 151 AMEVLGINPLHRLVVPRMWACAFIGLFLNGLVSVVGLVGGYFFNVVLQDGTPGAYLASFN 210 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + A L ++ +KA G+VA +G +G V VV + ++ + + Sbjct: 211 AMAQLPDLIQAEVKAFIFGLTAGLVAAYKGLNAKGGPKGVGDAVNQTVVITFMLLFVENF 270 Query: 363 LFAIFYFAI 371 + + YF + Sbjct: 271 VISALYFQL 279 >gi|319761579|ref|YP_004125516.1| hypothetical protein Alide_0863 [Alicycliphilus denitrificans BC] gi|330823447|ref|YP_004386750.1| hypothetical protein Alide2_0819 [Alicycliphilus denitrificans K601] gi|317116140|gb|ADU98628.1| protein of unknown function DUF140 [Alicycliphilus denitrificans BC] gi|329308819|gb|AEB83234.1| protein of unknown function DUF140 [Alicycliphilus denitrificans K601] Length = 260 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 66/262 (25%), Positives = 133/262 (50%), Gaps = 12/262 (4%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR-QMYYVGVSGVPVV 171 H+G + + D A L + G F + +F L+R Q++++G + ++ Sbjct: 8 HVGYAVRSKLADLGMGAR---LFVRLVGLFGTAMRRF-----GLVRDQVHFLGNYSLSII 59 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTAVMIAGRSGSAIVA 230 + G V+A QG L +G+ S+ L+ L L RE+G ++TA++ AGR+G+++ A Sbjct: 60 AMSGLFVGFVLALQGYNVLQLYGSA-NSLGLVVTLGLVRELGPVVTALLFAGRAGTSLTA 118 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 EIG M+ E++ A+ M +D V+ +++PR W +I++PLL + + +IG +V Sbjct: 119 EIGLMRAGEQLSAMEMMAVDPVQRILAPRFWGGVIAMPLLAAVFSAVGVIGGWLVGVVLI 178 Query: 291 DIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 + F+ + S+ + ++ G++K+ A+ +A+ +G+ + + T Sbjct: 179 GVDGGAFWGQMQSSVDVWKDVGNGVVKSVVFGVAVTFIAVLQGYMAKPTPEGVSRATTRT 238 Query: 350 VVQSISIVIIIDSLFAIFYFAI 371 VV + V+ +D + F+I Sbjct: 239 VVMASLTVLGLDFVLTALMFSI 260 >gi|58579932|ref|YP_198948.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84621937|ref|YP_449309.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|58424526|gb|AAW73563.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae KACC10331] gi|84365877|dbj|BAE67035.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 249 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 43/126 (34%), Positives = 75/126 (59%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 S + F+ L+R++Y VG +P++ + G V+ QG L+ +GA L+ + Sbjct: 24 SLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTLQGYRTLTTYGASDALSTLLGL 83 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ M +D V ++PR WA ++ Sbjct: 84 SLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKALELMAIDPVAKAVAPRFWAAVL 143 Query: 266 SLPLLT 271 ++PLLT Sbjct: 144 TVPLLT 149 >gi|289667685|ref|ZP_06488760.1| toluene tolerance protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 249 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 43/126 (34%), Positives = 75/126 (59%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 S + F+ L+R++Y VG +P++ + G V+ QG L+ +GA L+ + Sbjct: 24 SLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTLQGYRTLTTYGASDALSTLLGL 83 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ M +D V ++PR WA ++ Sbjct: 84 SLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKALELMAIDPVAKAVAPRFWAAVL 143 Query: 266 SLPLLT 271 ++PLLT Sbjct: 144 TVPLLT 149 >gi|268317890|ref|YP_003291609.1| hypothetical protein Rmar_2342 [Rhodothermus marinus DSM 4252] gi|262335424|gb|ACY49221.1| protein of unknown function DUF140 [Rhodothermus marinus DSM 4252] Length = 253 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 48/139 (34%), Positives = 87/139 (62%), Gaps = 1/139 (0%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSIL 206 +FK + +L QM +G+ +P+V + + +GAV+ Q A+QL S F + +++ Sbjct: 31 EFKTYRKNLFDQMVRIGIDSIPIVSMAAAFSGAVMTVQTAYQLVSPFIPKTVIGAVVAPS 90 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 + E+ V++T ++AGR G+ I AE+G+M++ E+IDA+ MGL+ V L+ PR+ A ++ Sbjct: 91 MILELAVVVTGFILAGRVGARIAAELGTMRVTEQIDALEAMGLNSVSYLVVPRVVAGMVM 150 Query: 267 LPLLTILANFSAIIGASIV 285 LP+L ++A F I+ +V Sbjct: 151 LPVLYVVACFVGIVSGILV 169 >gi|121609355|ref|YP_997162.1| hypothetical protein Veis_2398 [Verminephrobacter eiseniae EF01-2] gi|121553995|gb|ABM58144.1| protein of unknown function DUF140 [Verminephrobacter eiseniae EF01-2] Length = 260 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 57/218 (26%), Positives = 120/218 (55%), Gaps = 2/218 (0%) Query: 155 SLIR-QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 +L+R Q++++G + ++++ G V+ QG + L ++GA L+++ +RE+G Sbjct: 42 ALVRDQLHFLGNYSLAIIVVSGLFVGFVLGLQGYYTLQRYGASEALGLLVALSLVRELGP 101 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 ++TA++ AGR+G+++ AEIG M+ E++ A+ M +D VR +++PR WA +I++PLL + Sbjct: 102 VVTALLFAGRAGTSLTAEIGLMRSGEQLSAMEMMAIDPVRRILAPRFWAGVIAMPLLAAM 161 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 + +IG ++V I F+S+ + ++ G++K+ + VA+ +G Sbjct: 162 FSAVGVIGGAVVGVLMIGIDPGAFWSQMQGGVDIWRDLGNGVLKSLVFGFTVSFVALLQG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + + T VV + V+ +D + F+ Sbjct: 222 YVARPTPEGVARATTRTVVLASLAVLALDFILTALMFS 259 >gi|10086491|gb|AAG12551.1|AC007797_11 Hypothetical Protein [Arabidopsis thaliana] Length = 283 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 52/213 (24%), Positives = 108/213 (50%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 ++Q+ G + V +L S G Q + ++ G ++++ RE+ ++T Sbjct: 60 LQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFTRLGLNRSIGGVLALAFSRELSPVIT 119 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 ++++AGR GSA AE+G+M+++E+ D +R +G D + LI+PR+ A ++LP LT++ Sbjct: 120 SIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADPIDYLITPRVIASCLALPFLTLMCFT 179 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + ++++ Y I + H +I + +IK+ I +++ G Sbjct: 180 VGMASSALLSDAVYGISINIIMDSAHRALRPWDIVSAMIKSQVFGAIISVISCSWGVTTT 239 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+ T+ VV S+ + I D + + F+F Sbjct: 240 GGAKGVGESTTSAVVMSLVGIFIADFVLSSFFF 272 >gi|78188458|ref|YP_378796.1| putative ABC transport system permease protein [Chlorobium chlorochromatii CaD3] gi|78170657|gb|ABB27753.1| putative ABC transport system permease protein [Chlorobium chlorochromatii CaD3] Length = 264 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 64/204 (31%), Positives = 111/204 (54%), Gaps = 2/204 (0%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 Q G +P+V++ S GA++A + L FGA+ ++ +RE+G LL + Sbjct: 51 QATICGTDSIPIVLVSSISIGALLAVEVGNLLEDFGAKTMLGRSTALSVIRELGPLLMGL 110 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR-IWALIISLPLLTILANFS 277 M++ R GS AE+G+M+I+E+IDA+R G D V L+ PR + AL++ LP LT L++F+ Sbjct: 111 MLSARFGSRNGAELGAMQISEQIDALRAFGTDPVAKLVMPRLVAALVMFLP-LTALSDFA 169 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 + A+ + Y+ I +F++ + L + G +KAP A I +V+ GF Sbjct: 170 GLQSAAYMAEHYHHIDAGIFWNAVYPRLVLKDFVLGFLKAPVFAVIITLVSSFNGFNARG 229 Query: 338 HSNSLGKKVTTCVVQSISIVIIID 361 + +G+ +V S +V+I + Sbjct: 230 GTAGVGRATIKGIVVSSGLVLIAN 253 >gi|42525130|ref|NP_970510.1| ABC-type organic solvent resistance transport system, permease protein [Bdellovibrio bacteriovorus HD100] gi|39577341|emb|CAE81164.1| ABC-type organic solvent resistance transport system, permease protein [Bdellovibrio bacteriovorus HD100] Length = 239 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 48/157 (30%), Positives = 87/157 (55%), Gaps = 1/157 (0%) Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263 ++L LRE+G ++TA++++ R G+ +E+GSM+I E++DA++ +G+D V L+ PR A Sbjct: 71 AVLILRELGAIVTALLLSSRVGAGYASEVGSMQITEQVDALKMLGIDPVNYLVVPRFLAC 130 Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323 ++ ++T++AN + I A V Y +F + ++ +IK Sbjct: 131 VLGAMMITVVANMACIFSAMAVSQFYLGYTPGMFLTSMQRFVDFKDLIFAMIKGACFGGV 190 Query: 324 IGIVAMKEGFAVGVHSNSLGKKVT-TCVVQSISIVII 359 I +VA GF + +G+ T T VV SI+I++I Sbjct: 191 IPLVACYFGFRCQQGAEGVGRATTNTVVVSSIAIIVI 227 >gi|21233625|ref|NP_639542.1| toluene tolerance protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770590|ref|YP_245352.1| toluene tolerance protein [Xanthomonas campestris pv. campestris str. 8004] gi|21115493|gb|AAM43424.1| toluene tolerance protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575922|gb|AAY51332.1| toluene tolerance protein [Xanthomonas campestris pv. campestris str. 8004] Length = 249 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 42/126 (33%), Positives = 75/126 (59%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 S + F+ L+R++Y VG +P++ + G V+ QG L+ +GA L+ + Sbjct: 24 SLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTLQGYRTLTTYGASDALSTLLGL 83 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ M +D + ++PR WA ++ Sbjct: 84 SLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKALELMAIDPIAKAVAPRFWAAVL 143 Query: 266 SLPLLT 271 ++PLLT Sbjct: 144 TVPLLT 149 >gi|116073591|ref|ZP_01470853.1| possible transporter, membrane component [Synechococcus sp. RS9916] gi|116068896|gb|EAU74648.1| possible transporter, membrane component [Synechococcus sp. RS9916] Length = 248 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 65/231 (28%), Positives = 111/231 (48%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G+ +++ + K + L Q+ G +V++ G+V Q A +LS GA Sbjct: 18 GQAVSATARGKINTIDLFDQLMEAGPGSFLIVLITGVAAGSVFNIQVAAELSGMGAGSTV 77 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 +++I REI LLTA ++ G+ +A A++G+MK+ E+IDAI + D V L+ PR Sbjct: 78 GGVLAIGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTDPVEYLVVPR 137 Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319 + A+++ P+ +L AI I ++Y+IP AVF++ + ++ LIKA Sbjct: 138 LIAMVVMAPVQCLLFFAVAIYSGQITSTEFYNIPPAVFWNSVRTWLQPDDLPFMLIKALV 197 Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 I ++A G +G T VV + V ++D L F Sbjct: 198 FGLQIAVLACGWGLTTSGGPKEVGTSTTGSVVMILVTVALMDVLLTQILFG 248 >gi|187930306|ref|YP_001900793.1| hypothetical protein Rpic_3239 [Ralstonia pickettii 12J] gi|187727196|gb|ACD28361.1| protein of unknown function DUF140 [Ralstonia pickettii 12J] Length = 255 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 55/216 (25%), Positives = 114/216 (52%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +I Q+ ++G ++ + G V+ QG L+++G+E L+++ +RE+G ++ Sbjct: 40 VIEQLRFIGNDSFIIIAVSGLFVGFVLGLQGYNTLNRYGSEQALGLLVALSLVRELGPVV 99 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+G+++ AEIG MK E++ A+ M +D + +++PR WA I++PLL + + Sbjct: 100 TALLFAGRAGTSLTAEIGLMKAGEQLIAMEMMAVDPLARVLAPRFWAGFIAMPLLAAIFS 159 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTA-TLANIFTGLIKAPFMACAIGIVAMKEGFA 334 I+G V + F+S+ + + ++ G+IK+ A+ +A+ +G+ Sbjct: 160 AVGILGGYFVGVGLIGVDPGAFWSQMQAGVDVMDDVLNGVIKSVVFGVAVTFIALYQGYE 219 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D + F+ Sbjct: 220 AKATPEGVSRATTRTVVIASLTVLALDFVLTALMFS 255 >gi|325922508|ref|ZP_08184271.1| conserved hypothetical integral membrane protein [Xanthomonas gardneri ATCC 19865] gi|325924178|ref|ZP_08185738.1| conserved hypothetical integral membrane protein [Xanthomonas gardneri ATCC 19865] gi|325545309|gb|EGD16603.1| conserved hypothetical integral membrane protein [Xanthomonas gardneri ATCC 19865] gi|325547016|gb|EGD18107.1| conserved hypothetical integral membrane protein [Xanthomonas gardneri ATCC 19865] Length = 249 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 42/126 (33%), Positives = 75/126 (59%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 S + F+ L+R++Y VG +P++ + G V+ QG L+ +GA L+ + Sbjct: 24 SVPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTLQGYRTLTTYGASDALSTLLGL 83 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ M +D + ++PR WA ++ Sbjct: 84 SLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKALELMAIDPIAKAVAPRFWAAVL 143 Query: 266 SLPLLT 271 ++PLLT Sbjct: 144 TVPLLT 149 >gi|42524509|ref|NP_969889.1| ABC-type organic solvent resistance transport system permease protein [Bdellovibrio bacteriovorus HD100] gi|39576718|emb|CAE80882.1| ABC-type organic solvent resistance transport system permease protein [Bdellovibrio bacteriovorus HD100] Length = 275 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 63/223 (28%), Positives = 117/223 (52%), Gaps = 4/223 (1%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 +IR M ++G + ++ L TG ++ Q F A +++ RE+G + Sbjct: 52 EIIRHMEFIGNQSIGIICLTGGFTGLALSLQLYLGFKLFNAVNMVGPTVALGITRELGPV 111 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 LT +++A R+G A+ A +G+M++NE+IDA+ MG++ + L+SPR+ A I +PLL + Sbjct: 112 LTGLIVAARAGGAMAARLGTMRVNEQIDALDVMGVNTKQYLVSPRLVAAFICMPLLVAVF 171 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 +F A++G+ + K + AVF+ + + +I GL+K ++ GF Sbjct: 172 DFVAMLGSWFLCVKMVGLDEAVFWQKIADFIEIRHINEGLLKGMVFGIYFALMCTYRGFN 231 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIID----SLFAIFYFAIGI 373 + +G+ VVQS+ +II+D ++ +FY +GI Sbjct: 232 TTGGAKGVGEATNQGVVQSMVGIIILDYFATNMIRLFYSLVGI 274 >gi|189347228|ref|YP_001943757.1| hypothetical protein Clim_1737 [Chlorobium limicola DSM 245] gi|189341375|gb|ACD90778.1| protein of unknown function DUF140 [Chlorobium limicola DSM 245] Length = 264 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 110/214 (51%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 K K + + Q G +P+V++ + G+++A + L FGA+ SI Sbjct: 40 KLKRYWRDFLDQATICGTDSIPIVLVSAVSIGSLLAIEVGNLLEDFGAKTMLGRSTSISV 99 Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267 +RE+G LL +M++ R GS AE+G+MKI+E+IDA+R G D V L+ PR+ A ++ Sbjct: 100 IRELGPLLMGLMLSARFGSRNGAELGAMKISEQIDALRAFGTDPVAKLVMPRLAAALVMF 159 Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327 LT L++F+ + A+ + Y+ + +F++ + + G KAP A I +V Sbjct: 160 IPLTALSDFAGLQSAAYLAEHYHHLDPGIFWNAVYPRLGPKDFVVGFAKAPVFAIIITLV 219 Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + GF + +G+ +V S +V+I + Sbjct: 220 SSYNGFIAKGGTAGVGRATIKGIVVSSGLVLIAN 253 >gi|213584877|ref|ZP_03366703.1| hypothetical protein SentesTyph_28030 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 179 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 58/171 (33%), Positives = 94/171 (54%), Gaps = 5/171 (2%) Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261 L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ E++ ++ M +D +R +ISPR W Sbjct: 9 LVALSLLRELGPVVAALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFW 68 Query: 262 ALIISLPLLTILANFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAP 318 A +ISLPLLTI+ I G S+ V WK D F F+S + ++ LIK+ Sbjct: 69 AGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGF--FWSAMQNAVDWRMDLVNCLIKSV 126 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 A + +A+ G+ S + + T VV + V+ +D + F Sbjct: 127 VFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASLAVLGLDFVLTALMF 177 >gi|262196626|ref|YP_003267835.1| hypothetical protein Hoch_3440 [Haliangium ochraceum DSM 14365] gi|262079973|gb|ACY15942.1| protein of unknown function DUF140 [Haliangium ochraceum DSM 14365] Length = 268 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 61/198 (30%), Positives = 101/198 (51%), Gaps = 5/198 (2%) Query: 158 RQMYYVG-VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDL-MSILQLREIGVLL 215 RQMY +G S V + + + F G V QGA QL + ++ + S L ++++G L Sbjct: 51 RQMYDIGNRSFVFIAVTMGFF-GMVFIYQGALQLDRIVGDVSLLGREFSKLLVKDLGPSL 109 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA+M+A R G+ I AE+GSM + E++DA+R G+ + L++PR+ A ++ + L I Sbjct: 110 TAMMLATRVGAGIAAELGSMTVTEQVDALRMSGVRPIDYLVAPRLLAALVMVTALAIFGT 169 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 A + W Y+D+ +F S ++ GL+KA A I ++A G Sbjct: 170 AVAFAAGGLTAWAYFDLNPRAYFD--LSQVEFGHLGLGLVKAVVYAANIPLIAAFCGLRA 227 Query: 336 GVHSNSLGKKVTTCVVQS 353 S +G+ T V+ S Sbjct: 228 HGGSAGVGRATTAAVIGS 245 >gi|193213347|ref|YP_001999300.1| hypothetical protein Cpar_1708 [Chlorobaculum parvum NCIB 8327] gi|193086824|gb|ACF12100.1| protein of unknown function DUF140 [Chlorobaculum parvum NCIB 8327] Length = 265 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 61/214 (28%), Positives = 113/214 (52%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 K K + ++ Q GV +P+V++ S GA+++ + L +FGA+ S Sbjct: 40 KAKRYWRDVLDQALICGVESIPIVLVSSISIGALMSMEVGNLLEEFGAKTMLGRSTSNAV 99 Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267 LRE+G LL +M++ R GS AE+G+M+I+E+IDA+R G D + L+ PR+ A +I Sbjct: 100 LRELGPLLMGLMLSARYGSRNGAELGAMQISEQIDALRAFGTDPIAKLVMPRLLAALIMF 159 Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327 L L++F+ + A++V Y+ + +F++ + + +KAP A I +V Sbjct: 160 VPLIALSDFAGLQTAALVAQFYHKLDPGIFWNSIYPRLLPKDFVVSFLKAPVFAIIITLV 219 Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + GF+ + +G+ +V S +V++ + Sbjct: 220 SSFNGFSAHGGTAGVGRSTIKGIVASSGLVLVAN 253 >gi|285016849|ref|YP_003374560.1| ABC transporter permease [Xanthomonas albilineans GPE PC73] gi|283472067|emb|CBA14574.1| putative abc transporter permease abc transporter, permease protein [Xanthomonas albilineans] Length = 249 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 44/126 (34%), Positives = 74/126 (58%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 S + L LIR++Y VG +P++ + G V+ QG L+ +GA L+ + Sbjct: 24 SLPSRDLLAELIREIYKVGARSLPIIAVGGAFVGLVLTLQGYRTLTTYGASDALSTLLGL 83 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ M +D V ++PR WA ++ Sbjct: 84 SLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKALELMAIDPVAKAVAPRFWAAVL 143 Query: 266 SLPLLT 271 ++PLLT Sbjct: 144 TVPLLT 149 >gi|254423231|ref|ZP_05036949.1| conserved domain protein [Synechococcus sp. PCC 7335] gi|196190720|gb|EDX85684.1| conserved domain protein [Synechococcus sp. PCC 7335] Length = 291 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 6/209 (2%) Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G V VI + G + Q A ++S+FGA + E+ +LTA ++A + Sbjct: 81 GPRCVASVIATNVCAGLIFGIQTAREMSRFGAVSSLGSAFAAGYCSELAPILTAGVLACQ 140 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 GSA AEI +MK+ ++IDA++ + D + L+ PR+ A + LP+LT+LA ++ Sbjct: 141 VGSAFAAEIAAMKLTQQIDALKMLRTDPIDYLVMPRVIACAVMLPMLTVLALVCGVMSGG 200 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 + YY +P F +++++ + KA I I + G +H +G Sbjct: 201 FLTTYYYHLPMGTFLDGVRGALSVSDVLLIMGKAILFGLVIAIASCSRGLTSALHGKGVG 260 Query: 344 KKVTTCVVQS------ISIVIIIDSLFAI 366 + T+ V+ + I +VI +L AI Sbjct: 261 QSATSAVMMAWIALFFIDLVIAFLALLAI 289 >gi|327399719|ref|YP_004340588.1| hypothetical protein Hipma_1573 [Hippea maritima DSM 10411] gi|327182348|gb|AEA34529.1| protein of unknown function DUF140 [Hippea maritima DSM 10411] Length = 254 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 61/212 (28%), Positives = 100/212 (47%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 QMY++GV +V L S G V Q +FGAE +++ RE+ +LTA Sbjct: 43 EQMYFIGVKSTLIVALTSMFVGMVEVLQIYHGFHKFGAESMIGYTVAVSLGRELSPVLTA 102 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +MI R+ SA+ AE+G+M++ ++IDA+ M ++ + L++PR+ A + LP L L+N Sbjct: 103 LMIVARNVSAMAAELGTMRVTQQIDALEVMAVNPINFLVAPRVIATTVMLPALVSLSNAI 162 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 IG +V + + + ++ GLIKA I ++ G Sbjct: 163 GNIGGYLVGIGVLGLNPTSYTKNIQVYIDMTDLTYGLIKAAVFGLIISLIGCYMGLTTKG 222 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 S +G T VV + V++ D F F Sbjct: 223 GSRGVGISTTKAVVAASISVLVADYFLTAFLF 254 >gi|309782892|ref|ZP_07677612.1| toluene tolerance ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] gi|308918316|gb|EFP63993.1| toluene tolerance ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] Length = 255 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 55/216 (25%), Positives = 114/216 (52%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +I Q+ ++G ++ + G V+ QG L+++G+E L+++ +RE+G ++ Sbjct: 40 VIEQLRFIGNDSFIIIAVSGLFVGFVLGLQGYNTLNRYGSEQALGLLVALSLVRELGPVV 99 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+G+++ AEIG MK E++ A+ M +D + +++PR WA I++PLL + + Sbjct: 100 TALLFAGRAGTSLTAEIGLMKAGEQLIAMEMMAVDPLARVLAPRFWAGFIAMPLLAAIFS 159 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTA-TLANIFTGLIKAPFMACAIGIVAMKEGFA 334 I+G V + F+S+ + + ++ G+IK+ A+ +A+ +G+ Sbjct: 160 AVGILGGYFVGVGLIGVDPGAFWSQMQAGVDVMDDVLNGVIKSFVFGVAVTFIALYQGYE 219 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D + F+ Sbjct: 220 AKATPEGVSRATTRTVVIASLTVLALDFVLTALMFS 255 >gi|34540774|ref|NP_905253.1| hypothetical protein PG1033 [Porphyromonas gingivalis W83] gi|34397088|gb|AAQ66152.1| conserved hypothetical protein [Porphyromonas gingivalis W83] Length = 248 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 115/211 (54%), Gaps = 9/211 (4%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL- 214 LI+++ +GV V +VI+ISF GAVI Q + ++ F+I + REI +L Sbjct: 33 LIKEIDKLGVDSVWIVIIISFFIGAVITIQLSLNMTSPLIPRFTIGYST----REIILLE 88 Query: 215 ----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 + +++AG+ GS+I +E+G+M++ E+IDA+ MG++ LI P+I ++ +P+L Sbjct: 89 FSSTVMCLILAGKVGSSIASELGTMRVTEQIDAMEVMGVNSANYLILPKIIGFMLFVPVL 148 Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330 +I++ + I+G + ++P + F + N+F +IK+ A I VA Sbjct: 149 SIISMSTGIVGGYLACSLVPNLPRSDFEYGLQLFFSPYNVFYSIIKSVAYAFIISSVAGY 208 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 G+ V + +GK T VVQ +V++ D Sbjct: 209 YGYTVKGGALQVGKASTNAVVQCSILVLVAD 239 >gi|329962630|ref|ZP_08300578.1| hypothetical protein HMPREF9446_02167 [Bacteroides fluxus YIT 12057] gi|328529661|gb|EGF56559.1| hypothetical protein HMPREF9446_02167 [Bacteroides fluxus YIT 12057] Length = 258 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 74/258 (28%), Positives = 127/258 (49%), Gaps = 26/258 (10%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 VK++ +G I G A + + F I +M +GV+ + +V+LISF Sbjct: 6 VKYLRVMIKALKTVGRYIMLMGRVFARPERMRMFFRQYINEMEQLGVNSIGIVLLISFFI 65 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIG 233 GAVI Q + +++ ++ REI +L + +++AG+ GS I +E+G Sbjct: 66 GAVITIQIKLNIESPFMPRWTVGYVT----REIMLLEFSSSIMCLILAGKVGSNIASELG 121 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW-----K 288 +M++ ++IDA+ MG++ LI P+I A++ ++PL+ + F+ IIGA W Sbjct: 122 TMRVTQQIDALEIMGVNSANYLILPKISAMVTTIPLMVTFSIFAGIIGAFCTCWFGGIMS 181 Query: 289 YYDIPFAV---FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 D+ + + F F I+ G+IK+ F A I V+ G+ V S +GK Sbjct: 182 AVDLEYGLQYMFVEWF--------IWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKA 233 Query: 346 VTTCVVQSISIVIIIDSL 363 T VV S S++I+ L Sbjct: 234 STDSVVCS-SVLILFSDL 250 >gi|241664474|ref|YP_002982834.1| hypothetical protein Rpic12D_2892 [Ralstonia pickettii 12D] gi|240866501|gb|ACS64162.1| protein of unknown function DUF140 [Ralstonia pickettii 12D] Length = 255 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 54/216 (25%), Positives = 114/216 (52%), Gaps = 1/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 ++ Q+ ++G ++ + G V+ QG L+++G+E L+++ +RE+G ++ Sbjct: 40 VLEQLRFIGNDSFIIIAVSGLFVGFVLGLQGYNTLNRYGSEQALGLLVALSLVRELGPVV 99 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+G+++ AEIG MK E++ A+ M +D + +++PR WA I++PLL + + Sbjct: 100 TALLFAGRAGTSLTAEIGLMKAGEQLIAMEMMAVDPLARVLAPRFWAGFIAMPLLAAIFS 159 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTA-TLANIFTGLIKAPFMACAIGIVAMKEGFA 334 I+G V + F+S+ + + ++ G+IK+ A+ +A+ +G+ Sbjct: 160 AVGILGGYFVGVGLIGVDPGAFWSQMQAGVDVMDDVLNGVIKSVVFGVAVTFIALYQGYE 219 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D + F+ Sbjct: 220 AKATPEGVSRATTRTVVIASLTVLALDFVLTALMFS 255 >gi|168699832|ref|ZP_02732109.1| probable permease of ABC transporter [Gemmata obscuriglobus UQM 2246] Length = 276 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 67/211 (31%), Positives = 112/211 (53%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 +R VG + V VV + G V+A Q Q G E ++ I +RE+G +L Sbjct: 49 LRVAVEVGTNSVGVVAITGTFIGMVLAVQAYGQFHTIGMETSLGAVIHISVVRELGPVLA 108 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AVM+AGR GSA+ AE+ +M++ E++DA+ +G+D V+ L+ PR+ A + LPLLT+LA+ Sbjct: 109 AVMLAGRVGSAMAAELATMRVTEQLDALACLGVDPVKYLVGPRLLACFLLLPLLTVLADV 168 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + G+S++ Y I ++ L ++ GL+KA + ++A GF Sbjct: 169 MGLFGSSLICLHVYHIDSHHYWRHTREFVKLWDVSVGLMKAFVFGAVLSLIACHRGFNSK 228 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + +G+ T V + ++IID L A+ Sbjct: 229 AGAAGVGRAATEAFVIAFVAILIIDFLLAML 259 >gi|72382734|ref|YP_292089.1| putative transporter, membrane component [Prochlorococcus marinus str. NATL2A] gi|72002584|gb|AAZ58386.1| Protein of unknown function DUF140 [Prochlorococcus marinus str. NATL2A] Length = 249 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 66/219 (30%), Positives = 106/219 (48%), Gaps = 8/219 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI Q+ G +V++ G V Q A +LS+ G L++I REI LL Sbjct: 35 LIDQLMEAGPGSFLIVLITGIAAGTVFNIQVAAELSKQGLGSAVGGLLAIGMAREIAPLL 94 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL-- 273 TA ++ G+ +A A+IG+MK+ E+IDAI + D V L+ PRI A+++ P+ +L Sbjct: 95 TATLLTGKVATAYAAQIGTMKVTEQIDAITMLQTDPVEYLVVPRICAMVVMAPIQCLLFF 154 Query: 274 --ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 A FS ++I+ Y IP ++F++ +++ L+KA I I+A Sbjct: 155 SIALFSGQFSSTIL----YQIPPSIFWNSVREWLITSDLPFMLVKALVFGLLIAIIACGW 210 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G +G T VV ++ V ++D L FA Sbjct: 211 GLTTRGGPKEVGSSTTGAVVMTLITVSLVDVLLTQVLFA 249 >gi|270595146|ref|ZP_06221505.1| conserved hypothetical protein [Haemophilus influenzae HK1212] gi|270318343|gb|EFA29500.1| conserved hypothetical protein [Haemophilus influenzae HK1212] Length = 133 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 46/115 (40%), Positives = 76/115 (66%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++QM+ +GV + +++L G V+ QG L F AE L+++ LRE+G ++ Sbjct: 19 LVKQMHVLGVQSLLIILLSGLFIGMVLGLQGYVVLVDFSAETSJGQLVALSLLRELGPVV 78 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+P+L Sbjct: 79 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPIL 133 >gi|159476846|ref|XP_001696522.1| lipid transfer machine permease [Chlamydomonas reinhardtii] gi|158282747|gb|EDP08499.1| lipid transfer machine permease [Chlamydomonas reinhardtii] Length = 245 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 55/213 (25%), Positives = 113/213 (53%), Gaps = 2/213 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 Q+ VG + + V +L + G V Q + ++ G ++++ RE+ ++TA Sbjct: 23 EQLRLVGPASLGVSLLTAGFVGMVFTIQFVREFAKLGLTRSVGGVLALALSRELTPVVTA 82 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +++AGR GSA AE+G+M+++E++D++R + D V L++PR+ A +I+ P+L +L F Sbjct: 83 IILAGRVGSAFAAELGTMQVSEQMDSLRVLYTDPVDYLVTPRVLASMIAGPILNVLC-FL 141 Query: 278 AIIGASIVIWK-YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 +GA++ + Y++P V T ++ T ++K+ + ++ GF Sbjct: 142 MGMGAAVFLADIVYNVPANVIVDSARRALTSYDVMTSMVKSWVFGTVVATISCAWGFTTS 201 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+ T+ VV S+ + I D ++ +F Sbjct: 202 GGAKGVGESTTSAVVISLVTIFIADFFLSLVFF 234 >gi|124268284|ref|YP_001022288.1| hypothetical protein Mpe_A3100 [Methylibium petroleiphilum PM1] gi|124261059|gb|ABM96053.1| putative membrane protein [Methylibium petroleiphilum PM1] Length = 260 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 54/217 (24%), Positives = 114/217 (52%), Gaps = 1/217 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 ++ Q++++G + ++ + G V+ QG + L ++G+ L+++ +RE+G ++ Sbjct: 44 VVDQVHFLGNHSLAIITVSGLFVGFVLGLQGYYTLQRYGSSEALGLLVALSLVRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ AGR+G+++ AEIG MK E++ A+ M +D V+ +++PR W + ++PLL + + Sbjct: 104 TALLFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVDPVQRVLAPRFWGGVFAMPLLAAVFS 163 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFA 334 I+G V I F+S+ + ++ G++K+ + VA+ EG+ Sbjct: 164 AVGILGGWAVGVLLIGIDAGGFWSQMQGGVDVFKDVGNGIVKSMVFGVTVTFVALWEGYT 223 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 + + T VV + V+ +D + F+I Sbjct: 224 CQPTPEGVSRATTRTVVVASLAVLGLDFVLTAMMFSI 260 >gi|159903919|ref|YP_001551263.1| putative transporter, membrane component [Prochlorococcus marinus str. MIT 9211] gi|159889095|gb|ABX09309.1| possible transporter, membrane component [Prochlorococcus marinus str. MIT 9211] Length = 248 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 105/215 (48%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI Q+ G + +V++ G V Q A +LS+ G L++I REI LL Sbjct: 34 LIDQLMEAGPASFIIVLITGISAGTVFNIQVAAELSRQGVGSEVGGLLAIGLAREIAPLL 93 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA ++ G+ +A A++G+MK+ E+IDAI + D + L+ PR+ A++I PL +L Sbjct: 94 TATLLTGKVATAYAAQLGTMKVTEQIDAITMLQTDPIDYLVVPRVIAMVIMAPLQCLLFF 153 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 A+ I +Y IP VF++ + +++I LIKA I ++A G Sbjct: 154 TVALWSGQISSTYFYSIPINVFWNSVNEWLVISDIPFMLIKAVVFGFQIAVIACGWGLTT 213 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +G T VV ++ V ++D L F Sbjct: 214 RGGAKEVGTSTTGAVVMTLLSVSLMDVLLTKVLFG 248 >gi|330991409|ref|ZP_08315360.1| putative ABC transporter permease protein [Gluconacetobacter sp. SXCC-1] gi|329761428|gb|EGG77921.1| putative ABC transporter permease protein [Gluconacetobacter sp. SXCC-1] Length = 261 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 96/171 (56%) Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 +G +PVV L + +G VIA Q +Q+ A+ ++ + RE+G +L +M+AG Sbjct: 53 IGFFSLPVVALTALFSGGVIALQSYTGFAQYHAQNAIAGIVILAVTRELGPVLAGLMVAG 112 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 R G+A+ AEIG+M++ ++IDA+ T+ + ++ L++PR+ A ++LP L ++A+ ++G Sbjct: 113 RVGAAMSAEIGTMRVTDQIDALSTLSTNPMKYLVTPRLVAGTLALPFLVLVADILGVLGG 172 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 V D + + + ++ + ++ GL+KA I ++ G+ Sbjct: 173 FTVCVMKLDFSPSAYIAATIASLKVMDVTVGLVKAAIFGFLIALMGCYHGY 223 >gi|21673166|ref|NP_661231.1| hypothetical protein CT0327 [Chlorobium tepidum TLS] gi|21646245|gb|AAM71573.1| conserved hypothetical protein [Chlorobium tepidum TLS] Length = 252 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 60/218 (27%), Positives = 115/218 (52%) Query: 144 ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203 A+ K K + ++ Q + GV +P+V++ S GA+++ + L +FGA+ Sbjct: 23 ATLPKAKRYWRDVLDQAFICGVESIPIVLVSSISIGALMSMEVGNLLEEFGAKTMLGRST 82 Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263 S LRE+G LL +M++ R G+ AE+G+M+I+E+IDA+R G D + L+ PR+ A Sbjct: 83 SNAVLRELGPLLMGLMLSARYGARNGAELGAMQISEQIDALRAFGTDPIAKLVMPRLLAA 142 Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323 +I L L++F+ + ++V Y+ + +F++ + + +KAP A Sbjct: 143 LIMFVPLIALSDFAGLQTGALVAQYYHKLDPGIFWNSIYPRLLPMDFVVSFLKAPVFAII 202 Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 I +V+ GF+ + +G+ +V S +V++ + Sbjct: 203 ITLVSSFNGFSARGGTAGVGRSTIKGIVASSGLVLVAN 240 >gi|190571416|ref|YP_001975774.1| hypothetical protein WPa_1028 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190357688|emb|CAQ55136.1| Putative membrane protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 260 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 60/203 (29%), Positives = 105/203 (51%), Gaps = 1/203 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 RQ+ +G +P+V L GAVI Q + E L++I ++E+G +L + Sbjct: 49 RQIIEIGFFSLPIVGLTGVFIGAVIVLQSSLSGILINQEQVVPKLVTITIIKELGPVLIS 108 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +++ G+ GS+I AEIG+M+I E+IDA+ T+ ++ + LI PRI A +I P+LT+ A+ Sbjct: 109 LIMVGKVGSSIAAEIGTMRITEQIDALTTLDINPFKYLIVPRILASVIVFPILTVCADLI 168 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 I G + ++ ++ + + GL+KA I + + G+ Sbjct: 169 GIFGGYVTAVFEFNHNLNIYIKYTAQFFNMYDFIVGLMKATAFGAIISVSSCYYGYHCRE 228 Query: 338 HSNSLGKKVTTCVVQSISIVIII 360 + +G T+ VV S SI+II+ Sbjct: 229 GARGVGIATTSTVVIS-SILIIL 250 >gi|90994584|ref|YP_537074.1| hypothetical protein 26 [Porphyra yezoensis] gi|122194637|sp|Q1XD94|YCF63_PORYE RecName: Full=Probable ABC transporter permease protein ycf63 gi|90819148|dbj|BAE92517.1| unnamed protein product [Porphyra yezoensis] Length = 263 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 60/215 (27%), Positives = 111/215 (51%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 +L+ Q+Y VG + + +L + V Q A + A ++ I RE+ + Sbjct: 36 NLVEQIYIVGPGSLNITLLTACFISMVFTMQIAKEFLYLDAASAIGAVIVIAFTRELSPV 95 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 LTAV+IAG+ GS+ AEI +M+ E+IDA+ + + + L+ P++ + + LP+L+I++ Sbjct: 96 LTAVIIAGKIGSSFTAEIATMETTEQIDALYLLNTNPIDYLVFPKVASCFLMLPILSIIS 155 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 ++I + V + YDIP +VF + ++++ L K+ F A IG ++ + G Sbjct: 156 LTASIAISLFVAFVMYDIPSSVFLKSAFNALSISDFLICLEKSMFFAIIIGFISCQWGLT 215 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G T+ VV + V I D + + F F Sbjct: 216 SNGGAKGVGNSTTSSVVTILFTVFITDFVLSYFMF 250 >gi|58039399|ref|YP_191363.1| ABC transporter permease protein [Gluconobacter oxydans 621H] gi|58001813|gb|AAW60707.1| ABC transporter permease protein [Gluconobacter oxydans 621H] Length = 261 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 56/201 (27%), Positives = 106/201 (52%), Gaps = 6/201 (2%) Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211 F SLI ++ +PVV L + +GAVIA Q Q+ + ++ + RE+ Sbjct: 46 FFSSLIETGFF----SLPVVALTALFSGAVIALQSYVGFGQYHVQSAIAGIVVLAVTREL 101 Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271 G +L +M+AGR G+A+ A+IG+M++ ++IDA+ T+ + ++ L++PR+ A ++LP L Sbjct: 102 GPVLAGLMVAGRVGAAMSAQIGTMRVTDQIDALTTLSTNPMKYLVTPRLLAGTLALPCLV 161 Query: 272 ILANFSAIIGA-SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330 ++A+ ++G ++ + K P + S T+ ++ GL+KA I ++ Sbjct: 162 LVADILGVMGGFTVSVAKLGFSPSTYITATLDSLKTM-DVVVGLVKAAVFGFLIALLGCY 220 Query: 331 EGFAVGVHSNSLGKKVTTCVV 351 G+ + +G T VV Sbjct: 221 NGYNSRGGAEGVGSATTAAVV 241 >gi|194337270|ref|YP_002019064.1| protein of unknown function DUF140 [Pelodictyon phaeoclathratiforme BU-1] gi|194309747|gb|ACF44447.1| protein of unknown function DUF140 [Pelodictyon phaeoclathratiforme BU-1] Length = 264 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 115/215 (53%), Gaps = 2/215 (0%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 K K + + Q G +P+V++ + GA++A + L FGA+ ++ Sbjct: 40 KIKRYWRDFLDQAGICGTDSIPIVLVSAISIGALLAIEVGNLLEDFGAKTMLGRSTALSV 99 Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR-IWALIIS 266 +RE+G LL +M++ R GS AE+G+M+I+E+IDA+R G D + L+ PR + ALI+ Sbjct: 100 IRELGPLLMGLMLSARFGSRNGAELGAMQISEQIDALRAFGTDPIAKLVMPRLVAALIMF 159 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326 LP LT L++F+ + A+ + Y+ I +F++ + + G +KAP A I + Sbjct: 160 LP-LTALSDFAGLQSAAYMAEHYHRIDPGIFWNAVYPRLAPKDFVVGFLKAPVFAIIITL 218 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 V+ GF+ + +G+ +V S +V+I + Sbjct: 219 VSSFNGFSARGGTAGVGRATIKGIVVSSGLVLIAN 253 >gi|260435355|ref|ZP_05789325.1| ABC-type transport system, permease component [Synechococcus sp. WH 8109] gi|260413229|gb|EEX06525.1| ABC-type transport system, permease component [Synechococcus sp. WH 8109] Length = 249 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 110/222 (49%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G+ A++ + + L QM G + +V++IS G+V Q A +L++ GA Sbjct: 18 GQAVAATLRGRINRGELFEQMLEAGPGSLLIVLIISVAAGSVFNIQVAAELTRQGAGSTV 77 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 +++I REI LLT+ ++AG+ +A A++G+MK+ E+IDAI + D V L+ PR Sbjct: 78 GGILAIGLAREIAPLLTSCLLAGKVATAYAAQLGTMKVTEQIDAITMLRTDPVEYLVVPR 137 Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319 + A+++ P+ F A+ + Y+IP AVF++ + ++ L+KA Sbjct: 138 MIAMVVMAPVQCFFFFFVAVWSGQLTSTALYNIPPAVFWTSVQTWMNPLDLPFMLVKALV 197 Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 I VA G +G T VV + +V ++D Sbjct: 198 FGLIIATVACGWGLTTRGGPKEVGTSTTGAVVMILILVALMD 239 >gi|53720756|ref|YP_109742.1| hypothetical protein BPSL3149 [Burkholderia pseudomallei K96243] gi|53724275|ref|YP_104245.1| ABC transporter permease [Burkholderia mallei ATCC 23344] gi|67641604|ref|ZP_00440380.1| ABC transporter, permease protein [Burkholderia mallei GB8 horse 4] gi|76810397|ref|YP_335067.1| ABC transporter permease [Burkholderia pseudomallei 1710b] gi|83719902|ref|YP_443507.1| ABC transporter permease [Burkholderia thailandensis E264] gi|121601502|ref|YP_994512.1| ABC transporter, permease protein [Burkholderia mallei SAVP1] gi|124386292|ref|YP_001027757.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10229] gi|126441452|ref|YP_001060680.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 668] gi|126450665|ref|YP_001082296.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|126451565|ref|YP_001067964.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|134283213|ref|ZP_01769914.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|167002607|ref|ZP_02268397.1| toluene tolerance ABC transporter, permease protein [Burkholderia mallei PRL-20] gi|167582553|ref|ZP_02375427.1| toluene tolerance ABC transporter, permease protein [Burkholderia thailandensis TXDOH] gi|167721498|ref|ZP_02404734.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei DM98] gi|167740468|ref|ZP_02413242.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 14] gi|167817681|ref|ZP_02449361.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 91] gi|167826076|ref|ZP_02457547.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 9] gi|167847585|ref|ZP_02473093.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei B7210] gi|167896161|ref|ZP_02483563.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 7894] gi|167904546|ref|ZP_02491751.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei NCTC 13177] gi|167912808|ref|ZP_02499899.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 112] gi|167920767|ref|ZP_02507858.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei BCC215] gi|217424760|ref|ZP_03456257.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 576] gi|226198280|ref|ZP_03793851.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|237814076|ref|YP_002898527.1| ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] gi|242317944|ref|ZP_04816960.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|254175241|ref|ZP_04881902.1| ABC transporter, permease protein [Burkholderia mallei ATCC 10399] gi|254180406|ref|ZP_04887004.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 1655] gi|254190369|ref|ZP_04896877.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|254198428|ref|ZP_04904849.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei S13] gi|254201319|ref|ZP_04907683.1| toluene tolerance ABC transporter, permease protein [Burkholderia mallei FMH] gi|254206661|ref|ZP_04913012.1| toluene tolerance ABC transporter, permease protein [Burkholderia mallei JHU] gi|254258882|ref|ZP_04949936.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 1710a] gi|254300642|ref|ZP_04968087.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 406e] gi|254357286|ref|ZP_04973560.1| toluene tolerance ABC transporter, permease protein [Burkholderia mallei 2002721280] gi|257137708|ref|ZP_05585970.1| ABC transporter, permease protein [Burkholderia thailandensis E264] gi|52211170|emb|CAH37159.1| putative membrane protein [Burkholderia pseudomallei K96243] gi|52427698|gb|AAU48291.1| ABC transporter, permease protein [Burkholderia mallei ATCC 23344] gi|76579850|gb|ABA49325.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710b] gi|83653727|gb|ABC37790.1| ABC transporter, permease protein [Burkholderia thailandensis E264] gi|121230312|gb|ABM52830.1| ABC transporter, permease protein [Burkholderia mallei SAVP1] gi|124294312|gb|ABN03581.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10229] gi|126220945|gb|ABN84451.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 668] gi|126225207|gb|ABN88747.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|126243535|gb|ABO06628.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|134245408|gb|EBA45501.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|147747213|gb|EDK54289.1| toluene tolerance ABC transporter, permease protein [Burkholderia mallei FMH] gi|147752203|gb|EDK59269.1| toluene tolerance ABC transporter, permease protein [Burkholderia mallei JHU] gi|148026350|gb|EDK84435.1| toluene tolerance ABC transporter, permease protein [Burkholderia mallei 2002721280] gi|157810484|gb|EDO87654.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 406e] gi|157938045|gb|EDO93715.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|160696286|gb|EDP86256.1| ABC transporter, permease protein [Burkholderia mallei ATCC 10399] gi|169655168|gb|EDS87861.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei S13] gi|184210945|gb|EDU07988.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 1655] gi|217392216|gb|EEC32241.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 576] gi|225929800|gb|EEH25816.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|237505137|gb|ACQ97455.1| ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] gi|238522557|gb|EEP86001.1| ABC transporter, permease protein [Burkholderia mallei GB8 horse 4] gi|242141183|gb|EES27585.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|243061712|gb|EES43898.1| toluene tolerance ABC transporter, permease protein [Burkholderia mallei PRL-20] gi|254217571|gb|EET06955.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 1710a] Length = 255 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 55/214 (25%), Positives = 118/214 (55%), Gaps = 1/214 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q++++G ++ + G V+ QG + L+++G+E L+++ +RE+G +++A Sbjct: 42 KQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVSA 101 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+++ AEIG MK E++ A+ M +D ++ +I+PR+WA +I++PLL + + Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPLKNVIAPRMWAGVIAMPLLAAIFSAV 161 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 ++G +V + F+S+ + A++ G+IK+ A+ +A+ +G+ Sbjct: 162 GVLGGYVVGVLLIGVDPGAFWSQMQGGVEVWADVGNGVIKSVVFGFAVTFIALFQGYEAK 221 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + T VV + V+ +D L F+ Sbjct: 222 PTPEGVSHATTKTVVYASLAVLGLDFLLTALMFS 255 >gi|160900967|ref|YP_001566549.1| hypothetical protein Daci_5535 [Delftia acidovorans SPH-1] gi|160366551|gb|ABX38164.1| protein of unknown function DUF140 [Delftia acidovorans SPH-1] Length = 260 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 57/215 (26%), Positives = 117/215 (54%), Gaps = 3/215 (1%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG-AEIFSIDLMSILQLREIGVLLTA 217 Q++++G + ++ + G V+ QG + L ++G AE + L+++ +RE+G ++TA Sbjct: 47 QIHFLGNYSLAIIGVSGLFVGFVLGLQGYYTLQRYGSAEALGL-LVALSLVRELGPVVTA 105 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+A+ AEIG MK E++ A+ M +D VR +++PR A +I++PLL + + Sbjct: 106 LLFAGRAGTALTAEIGLMKAGEQLSAMEMMAVDPVRRILAPRFVAGLIAMPLLAAVFSAV 165 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVG 336 +IG +V + F+ + + ++ G++K+ A+ +A+ +G+A Sbjct: 166 GVIGGWLVGVVMIGVDGGAFWGQMQNGVDWWYDLGNGVLKSLVFGVAVTFIALLQGYAAK 225 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 + + T VV + V+ +D L F++ Sbjct: 226 PTPEGVSRATTRTVVMASLAVLGLDFLLTATMFSL 260 >gi|213018814|ref|ZP_03334622.1| putative membrane protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212995765|gb|EEB56405.1| putative membrane protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 244 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 60/203 (29%), Positives = 105/203 (51%), Gaps = 1/203 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 RQ+ +G +P+V L GAVI Q + E L++I ++E+G +L + Sbjct: 33 RQIIEIGFFSLPIVGLTGVFIGAVIVLQSSLSGILINQEQVVPKLVTITIIKELGPVLIS 92 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +++ G+ GS+I AEIG+M+I E+IDA+ T+ ++ + LI PRI A +I P+LT+ A+ Sbjct: 93 LIMVGKVGSSIAAEIGTMRITEQIDALTTLDINPFKYLIVPRILASVIVFPILTVCADLI 152 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 I G + ++ ++ + + GL+KA I + + G+ Sbjct: 153 GIFGGYVTAVFEFNHNLNIYIKYTAQFFNMYDFIVGLMKATAFGAIISVSSCYYGYHCRE 212 Query: 338 HSNSLGKKVTTCVVQSISIVIII 360 + +G T+ VV S SI+II+ Sbjct: 213 GARGVGIATTSTVVIS-SILIIL 234 >gi|183221249|ref|YP_001839245.1| ABC transporter permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911340|ref|YP_001962895.1| ABC transporter membrane protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776016|gb|ABZ94317.1| Membrane protein of an ABC transporter complex [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779671|gb|ABZ97969.1| ABC-type transport system, permease; putative resistance to organic solvant; putative membrane protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 258 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 63/220 (28%), Positives = 111/220 (50%), Gaps = 9/220 (4%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 ++ QM+ GV + VV ++S TG ++ L FGAE L++I RE+ + Sbjct: 40 ILEQMFIAGVGSLFVVSIVSVFTGMILGLNTGLGLRDFGAEGQIGLLLTITLTREMSPFM 99 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 T++++A GSA+ AEIG+MK++EEIDA+ M + +R L+ PRI + +P+L + + Sbjct: 100 TSLILAASVGSAMAAEIGTMKVSEEIDALEVMSISPIRYLVMPRIVGFSLMVPVLCVYS- 158 Query: 276 FSAIIGASIVIWKYYDIP------FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329 +A+ I ++ + F + R S L +++ GL+K +I ++ Sbjct: 159 -AALGILGGGIVGHFQLGIDIISYFQDVYYRISSVPGLKDLYVGLLKGYVFGLSIATISC 217 Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS-LFAIFY 368 +G + +G+ VV S +VI L A+FY Sbjct: 218 SQGLRTEGGAIGVGQTTRKAVVTSFLMVIFSGYVLTALFY 257 >gi|189425024|ref|YP_001952201.1| hypothetical protein Glov_1965 [Geobacter lovleyi SZ] gi|189421283|gb|ACD95681.1| protein of unknown function DUF140 [Geobacter lovleyi SZ] Length = 270 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 59/215 (27%), Positives = 113/215 (52%), Gaps = 3/215 (1%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q+Y+ G+ +++L++ + G VI Q + + L+ ++ L E+G LL Sbjct: 53 LLKQLYFTGLEAAKIIVLVAVILGTVIVSQVIGLVGGGNGSLIGKVLVWVVFL-ELGPLL 111 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA+++ RSG+AI AE+G+MKIN EI A+ +G+D R L+ PR+ S+ LLTI Sbjct: 112 TAMIVIARSGTAIAAELGAMKINGEIAALERLGIDPERYLLLPRVIGAATSVMLLTIYFV 171 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 ++ +G +++ + I + F ++ + + + KA I ++ G +V Sbjct: 172 LTSFVGGFLIVSFGHHISYDQFIQGIVASLGIREVVVLMAKAAAFGLIIPLICCNAGMSV 231 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G + + + T V+ S+ + ++D + I Y A Sbjct: 232 GTSATEIPQAATRAVITSLFSIFVLDGV--ITYLA 264 >gi|307105433|gb|EFN53682.1| hypothetical protein CHLNCDRAFT_10117 [Chlorella variabilis] Length = 256 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 55/215 (25%), Positives = 114/215 (53%), Gaps = 2/215 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + Q+ VG + V +L + G V Q + ++ G ++++ RE+ ++T Sbjct: 33 LDQLNMVGPRSLGVCLLTAAFVGMVFTIQFIREFAKLGLTRSVGGVLALALSRELTPVVT 92 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 ++++AGR GSA AE+G+M+++E+ D++R +G D V LI+PR+ A +++ P+L +L F Sbjct: 93 SIIVAGRVGSAFAAELGTMQVSEQTDSLRVLGSDPVDYLITPRVMACMVAGPILNLLC-F 151 Query: 277 SAIIGASIVIWK-YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 +GAS+++ Y++ V + ++ T +IK I V+ G+ Sbjct: 152 CMGMGASVLLADTVYNVSCNVILDSAMRAISSWDVITSMIKCWVFGTIIATVSCAWGYTT 211 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +G+ T+ VV S+ ++ + D ++ +F+ Sbjct: 212 TGGAKGVGESTTSAVVISLVLIFVFDFALSLLFFS 246 >gi|134096234|ref|YP_001101309.1| ABC transporter membrane protein [Herminiimonas arsenicoxydans] gi|133740137|emb|CAL63188.1| ABC transporter, permease protein [Herminiimonas arsenicoxydans] Length = 259 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 61/218 (27%), Positives = 124/218 (56%), Gaps = 5/218 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 +I Q++++G + ++ + G V+ QG + L+++G+E ++ L+ L L RE+G + Sbjct: 44 VISQIHFIGNYSLVLIAVSGLFVGFVLGLQGYYTLNKYGSEQ-ALGLLVALSLTRELGPV 102 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TA++ AGR+G+++ AEIG MK E++ A+ M ++ ++ +++PR WA ++++P+L + Sbjct: 103 VTALLFAGRAGTSLTAEIGLMKAGEQLSAMEMMAVNPLQRVLAPRFWAGVVAMPVLAAIF 162 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGF 333 + IIG IV K + F+S+ + ++ G+IK+ A+ VA+ +G+ Sbjct: 163 SAIGIIGGYIVGVKMIGVDEGAFWSQMQGGVDVWDDVLNGVIKSVVFGFAVTFVALYQGY 222 Query: 334 AVGVHSNSLGKKVT-TCVVQSISIVIIIDSLFAIFYFA 370 + + T T V+ S+S V+ +D L F+ Sbjct: 223 QAQPTPEGVARATTRTVVIASLS-VLWLDFLLTALMFS 259 >gi|33240854|ref|NP_875796.1| putative transporter, membrane component [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33238383|gb|AAQ00449.1| ABC-type transport system involved in resistance to organic solvents permease component [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 248 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 66/233 (28%), Positives = 113/233 (48%), Gaps = 4/233 (1%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ--FGAEI 197 G+ S+ K + LI Q+ G + +V++ G V Q A +LS+ G+E+ Sbjct: 18 GQAVTSTTKGRFNKADLIDQLMEAGPASFLIVLITGVSAGTVFNIQVAAELSRQGLGSEV 77 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 L++I REI LLTA ++ G+ +A A++G+MK+ E+IDAI + D V L+ Sbjct: 78 GG--LLAIGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLKTDPVEYLVV 135 Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 PR+ A+++ PL +L A+ + +Y IP VF++ L ++ LIKA Sbjct: 136 PRLIAMVVMAPLQCLLFFSVALWSGQVSSTAFYSIPPNVFWNSVKEWIVLTDLPFMLIKA 195 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 I ++A G + +G T VV ++ V ++D + F+ Sbjct: 196 VVFGLQIAVIACGWGLTTRGGAKEVGTSTTGAVVMTLLTVSLMDVVLTKVLFS 248 >gi|89901707|ref|YP_524178.1| hypothetical protein Rfer_2936 [Rhodoferax ferrireducens T118] gi|89346444|gb|ABD70647.1| protein of unknown function DUF140 [Rhodoferax ferrireducens T118] Length = 260 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 60/226 (26%), Positives = 117/226 (51%), Gaps = 4/226 (1%) Query: 148 KFKGFLLSLIR-QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206 FK F LIR Q++++G + ++ + G V QG + L ++G+ L+++ Sbjct: 37 SFKRF--GLIRDQIHFLGNYSLAIIAVSGLFVGFVFGLQGYYTLQRYGSSSALGLLVTLT 94 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 +RE+G ++TA++ AGR+G+++ AEIG MK E+I + M +D V+ +++PR WA +I+ Sbjct: 95 LVRELGPVVTALLFAGRAGTSLTAEIGLMKAGEQISVMEMMAVDPVQRILAPRFWAGVIT 154 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIG 325 +PLL + + IIG +V + F+S+ + ++ G++K+ + Sbjct: 155 MPLLAAVFSAMGIIGGWVVGVLMIGVDGGSFWSQIQEGVDVWQDLGNGIVKSIVFGFTVT 214 Query: 326 IVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +A+ +GF + T VV + V+ +D + F + Sbjct: 215 FIALLQGFEAQPTPEGVASATTRTVVVASLAVLGLDFILTAMMFTV 260 >gi|332041054|gb|EGI77422.1| hypothetical protein HGR_06456 [Hylemonella gracilis ATCC 19624] Length = 260 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 58/216 (26%), Positives = 114/216 (52%), Gaps = 5/216 (2%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 Q++ +G + ++++ G V+ QG + L FG+E ++++ +RE+G ++ A+ Sbjct: 47 QIHLLGNHSLAIIVVSGLFVGFVLGLQGYYILVDFGSEQALGQMVTLSLVRELGPVVAAL 106 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 + AGR+G+++ AEIG +K E+++A+ M +D V+ +++PR WA +I+LPLLT A FSA Sbjct: 107 LFAGRAGTSLTAEIGLLKAGEQLNAMAMMAVDPVQRILAPRFWAGVIALPLLT--AVFSA 164 Query: 279 IIGASIVIWKYYDI---PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 + + I P A + S + +++ G+IK+ + A+ +G+ Sbjct: 165 VGVLGGWVVGVVMIGIDPGAFWGQMQASVSVWSDVGNGVIKSIVFGFTVSFTALLQGYEA 224 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 + + T VV + V+ +D + F I Sbjct: 225 QPTPEGVSRATTRTVVMASLAVLGLDFVLTALMFTI 260 >gi|162146934|ref|YP_001601395.1| hypothetical protein GDI_1139 [Gluconacetobacter diazotrophicus PAl 5] gi|209543998|ref|YP_002276227.1| hypothetical protein Gdia_1852 [Gluconacetobacter diazotrophicus PAl 5] gi|161785511|emb|CAP55082.1| putative membrane protein [Gluconacetobacter diazotrophicus PAl 5] gi|209531675|gb|ACI51612.1| protein of unknown function DUF140 [Gluconacetobacter diazotrophicus PAl 5] Length = 261 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 51/188 (27%), Positives = 98/188 (52%), Gaps = 10/188 (5%) Query: 156 LIRQMYY----------VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 L+R +Y +G +PVV L + +G VIA Q +Q+ + ++ + Sbjct: 36 LVRPPFYWRIFFGALVEIGFFSLPVVALTALFSGGVIALQSYTGFAQYHVQSAIAGIVVL 95 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 RE+G +L +M+AGR G+A+ AEIG+M++ ++IDA+ T+ + ++ L++PR+ A + Sbjct: 96 AVTRELGPVLAGLMVAGRVGAAMAAEIGTMRVTDQIDALTTLSTNPMKYLVTPRLLAGTL 155 Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325 +LP L ++A+ ++G V D V+ + + ++ GL+KA I Sbjct: 156 ALPCLVLVADILGVLGGFTVSVAKLDFSAPVYIAATFAAVKPIDVTVGLVKAGVFGFLIA 215 Query: 326 IVAMKEGF 333 ++ G+ Sbjct: 216 LMGCYHGY 223 >gi|294677110|ref|YP_003577725.1| ABC transporter permease [Rhodobacter capsulatus SB 1003] gi|294475930|gb|ADE85318.1| ABC transporter, permease protein [Rhodobacter capsulatus SB 1003] Length = 259 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 61/233 (26%), Positives = 117/233 (50%), Gaps = 11/233 (4%) Query: 149 FKGFLLS-LIRQMYY----------VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 F G +LS ++R +Y +G +PVV + +F TGA +A Q ++F AE Sbjct: 26 FTGAVLSHMLRPPFYSREFLQALLQIGWLSLPVVGMTAFFTGAALALQIYAGGARFSAES 85 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 +++I +RE+G +L +M+A R S+I AEIG+MK+ E+IDA+ T+ + ++ L Sbjct: 86 VVPSIVAIGMVRELGPVLGGLMVAARVASSIAAEIGTMKVTEQIDALVTLSTNPLKYLAV 145 Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 PR+ A +S+PLL + + ++G ++ + A + L ++ +GL+K Sbjct: 146 PRVLAATLSVPLLVAVGDVIGVLGGWLIGTERLGFNSATYIRNTWEYLELWDVGSGLVKG 205 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + ++ G G + +G+ + VV + ++ + L +F+ Sbjct: 206 AAFGFLVALMGCYYGMNSGRGAQGVGRATKSAVVAASVAILASNYLLTEVFFS 258 >gi|89898182|ref|YP_515292.1| ABC transporter [Chlamydophila felis Fe/C-56] gi|89331554|dbj|BAE81147.1| ABC transporter [Chlamydophila felis Fe/C-56] Length = 261 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 67/228 (29%), Positives = 115/228 (50%), Gaps = 3/228 (1%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 S+K K L S Q Y +GV+ +PVV+L VTG V+A Q +QL G +I + Sbjct: 35 SWK-KSLLRSTSMQGYDIGVASLPVVMLTGAVTGIVLALQSYYQLGIHGLSC-AIGFFVV 92 Query: 206 LQ-LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264 L EIG +LTA+ ++GR G AI A +G+M++ E++ A+ T+G++ + PRI A I Sbjct: 93 KSILVEIGPVLTALALSGRVGGAISAFLGTMRMTEQVSAMETLGVNPLEYFALPRIIAGI 152 Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI 324 I++P L I A ++ I ++ + +P V+ +++I ++K+ I Sbjct: 153 IAMPALVIAAVWAGIFCGYLLCRCAFQLPAHVYLHMVSGNVLISDIVMVIVKSLVFGFII 212 Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 +A +G + K T VV S ++ + + F+ +G Sbjct: 213 TSLACYQGLGKHCRIMDVAKVTTAGVVTSYISILFANCVITTFFHLLG 260 >gi|255549070|ref|XP_002515591.1| Inner membrane protein yrbE, putative [Ricinus communis] gi|223545535|gb|EEF47040.1| Inner membrane protein yrbE, putative [Ricinus communis] Length = 350 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 55/212 (25%), Positives = 109/212 (51%), Gaps = 2/212 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 ++Q+ VG V V +L S G Q + ++ G + ++++ RE+ ++T Sbjct: 127 LQQLERVGPKSVGVCLLTSAFVGMAFTIQFVREFTKLGLQRSVGGVLALAFSRELSPVVT 186 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 ++++AGR GSA AE+G+M+++E+ D +R +G + V L++PR+ A ++LPLLT++ Sbjct: 187 SIVVAGRIGSAYAAELGTMQVSEQTDTLRVLGTNPVDYLVTPRVIASCVALPLLTLMCFT 246 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + ++I+ + + + +I + +IK+ I IV+ G Sbjct: 247 VGLASSAILADGVFGVSINIILDSAQRVLKSWDIISAMIKSQVFGAIISIVSCAWGVTTS 306 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + +G+ T+ VV S+ + I D FA+ Y Sbjct: 307 GGAKGVGESTTSAVVISLVGIFIAD--FALSY 336 >gi|206890031|ref|YP_002249467.1| toluene tolerance protein Ttg2B [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741969|gb|ACI21026.1| toluene tolerance protein Ttg2B [Thermodesulfovibrio yellowstonii DSM 11347] Length = 258 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 65/218 (29%), Positives = 112/218 (51%), Gaps = 1/218 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 ++ QM Y G S V +V L+ G ++ Q + +LS G ++++ ++ I +REIG L+ Sbjct: 38 IVEQMEYAGSSSVFIVSLVCLFVGMALSLQLSAELSGLGLKMYTGKIVGIAVIREIGPLV 97 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++ GR G+ AEIGSM + +ID +R G+D ++ ++ PR+ A ++ LP LTI+ + Sbjct: 98 TALVFIGRVGAGQTAEIGSMILGHQIDTLRVYGIDPIKKVVVPRVVASVVMLPCLTIIGD 157 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 + G + + + ++S T N+ +G IK I ++ G Sbjct: 158 LVCLFGGYYIAVFVSNQSGSFYWSSIIKELTFQNVLSGSIKPFIFGYLISCISCFYGLTT 217 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID-SLFAIFYFAIG 372 + L T VV SI +VI +D L I +A+G Sbjct: 218 RGGAKGLRTSTTKAVVTSIVVVIAMDFVLTRILLYALG 255 >gi|119356498|ref|YP_911142.1| hypothetical protein Cpha266_0663 [Chlorobium phaeobacteroides DSM 266] gi|119353847|gb|ABL64718.1| protein of unknown function DUF140 [Chlorobium phaeobacteroides DSM 266] Length = 264 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 63/215 (29%), Positives = 115/215 (53%), Gaps = 2/215 (0%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 K K + + Q G +P+V++ + G+++A + L FGA+ SI Sbjct: 40 KIKRYWRDFLDQATICGTDSIPIVLVSAISIGSLLAIEVGNLLEDFGAKTMLGRSTSISV 99 Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR-IWALIIS 266 +RE+G LL +M++ R G+ AE+G+M+I+E+IDA+R G D V L+ PR I AL++ Sbjct: 100 IRELGPLLMGLMLSARFGARNGAELGAMQISEQIDALRAFGTDPVAKLVMPRLIAALVMF 159 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326 LP LT L++F+ + A+ + Y+ + +F++ + + G +KAP A I + Sbjct: 160 LP-LTALSDFAGLHSAAYMAEHYHRLDPGMFWNAVYPRLAPKDFVVGFVKAPVFAIIITL 218 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 V+ GF+ + +G+ +V S +V++ + Sbjct: 219 VSSFNGFSARGGTAGVGRSTIKGIVVSSGLVLVAN 253 >gi|297518302|ref|ZP_06936688.1| toluene ABC transporter, permease protein [Escherichia coli OP50] Length = 174 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 57/172 (33%), Positives = 94/172 (54%), Gaps = 5/172 (2%) Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261 L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ E++ ++ M +D +R +ISPR W Sbjct: 4 LVALSLLRELGPVVAALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFW 63 Query: 262 ALIISLPLLTILANFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAP 318 A +ISLPLLT++ I G S+ V WK D F F+S + ++ LIK+ Sbjct: 64 AGVISLPLLTVIFVAVGIWGGSLVGVSWKGIDSGF--FWSAMQNAVDWRMDLVNCLIKSV 121 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 A + +++ G+ S + + T VV S V+ +D + F Sbjct: 122 VFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 173 >gi|297191126|ref|ZP_06908524.1| ABC transporter integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] gi|197721750|gb|EDY65658.1| ABC transporter integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] Length = 256 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 63/215 (29%), Positives = 105/215 (48%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I+Q ++V + L+S GAVIA Q Q GA+ FS + LRE ++T Sbjct: 37 IQQAWFVASVTILPTALVSIPFGAVIALQIGSLTRQLGAQSFSGAASVLAVLREASPIVT 96 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++IAG G+AI A++G+ KI EEIDA+R +G+D + L+ PR+ A ++ LL L + Sbjct: 97 ALLIAGAGGTAICADLGARKIREEIDAMRVLGIDPIHRLVVPRVLATMLVAVLLNGLVSV 156 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + G + + + F + A L++++ +KA IVA +G Sbjct: 157 VGVAGGYFFNVVLQNGTPGAYLASFTTLAQLSDLWAAELKALVFGAIAAIVASYKGLTAK 216 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +G V VV + ++ + + + YF I Sbjct: 217 GGPKGVGDAVNQSVVITFMLLFVTNFVMTAVYFQI 251 >gi|149202595|ref|ZP_01879567.1| ABC transporter, inner membrane subunit [Roseovarius sp. TM1035] gi|149143877|gb|EDM31911.1| ABC transporter, inner membrane subunit [Roseovarius sp. TM1035] Length = 261 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 64/254 (25%), Positives = 120/254 (47%), Gaps = 17/254 (6%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 +I F D+ SQ + F+ FL +L++ +G +PVV + + Sbjct: 24 RIALFAADTISQ-------------LARPPFYFREFLHALVQ----IGWLSLPVVGMTAL 66 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 TG +A Q ++F AE +++I RE+G +L +M+A R S+I AEIG+MK Sbjct: 67 FTGGALALQIYAGGARFNAETVVPSIVAIGLTRELGPVLGGLMVAARVASSIAAEIGTMK 126 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 + E+IDA+ T+ + ++ L PR+ A +++P+L + + I+G +V D A Sbjct: 127 VTEQIDALTTLSTNPMKYLTLPRVLAATLAVPVLVGVGDVLGIMGGFLVGVGRLDFSAAT 186 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 + ++ +GLIK + ++ G G + +G+ + VV + + Sbjct: 187 YLHNTIDFLETWDVVSGLIKGAAFGFIVALMGCYYGMNSGRGAQGVGRATKSAVVAASVL 246 Query: 357 VIIIDSLFAIFYFA 370 ++ + L +FA Sbjct: 247 ILASNYLLTELFFA 260 >gi|124515845|gb|EAY57354.1| probable ABC transporter, permease [Leptospirillum rubarum] Length = 251 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 58/209 (27%), Positives = 107/209 (51%), Gaps = 15/209 (7%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 QM +GV +P+V L S G +A Q ++ +GA +++ +R++G +L ++ Sbjct: 34 QMDRIGVGSIPIVFLASIFAGLDMALQFEVVMAPYGARALLGKVVTTSIIRDMGPVLASL 93 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 +++ R + I +E+G M ++IDA+R MG+D + L++PRI+A I+ +P+L+I +F A Sbjct: 94 VMSARVTAGISSELGMMNSTQQIDALRVMGVDPLDRLVAPRIFAGIVMMPILSISGDFLA 153 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF-------MACAIGIVAMKE 331 ++ + +P +F+S T N+ +K F + C G+ + Sbjct: 154 LLAGLGISMAVGHVPAPLFWSGVRDALTAQNLTDAFLKPLFFGFILTSIGCYYGMKSASG 213 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIII 360 F VG K TT V S +I I++ Sbjct: 214 AFGVG--------KSTTKAVVSAAIWILV 234 >gi|329913017|ref|ZP_08275865.1| putative transport protein (ABC superfamily, membrane) [Oxalobacteraceae bacterium IMCC9480] gi|327545454|gb|EGF30661.1| putative transport protein (ABC superfamily, membrane) [Oxalobacteraceae bacterium IMCC9480] Length = 258 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 56/212 (26%), Positives = 116/212 (54%), Gaps = 1/212 (0%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 Q+++VG + ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA+ Sbjct: 46 QIHFVGNYSLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTAL 105 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 + AGR+G+++ AEIG MK E++ A+ M +D ++ +++PR WA +I++P+L + + Sbjct: 106 LFAGRAGTSLTAEIGLMKAGEQLSAMEMMAVDPIQRVLAPRFWAGVIAMPVLAAIFSAVG 165 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 I+G +V + I F+S+ + +I G++K+ A+ +A+ +G+ Sbjct: 166 IVGGYVVGVQMIGIDEGAFWSQMQGGVDVWQDIANGVLKSFVFGIAVTFIALFQGYEAQP 225 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + + T VV V+ +D L F Sbjct: 226 TPEGVARATTRTVVIGSLTVLWLDFLMTALMF 257 >gi|206602089|gb|EDZ38571.1| Probable ABC transporter, permease [Leptospirillum sp. Group II '5-way CG'] Length = 251 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 58/209 (27%), Positives = 107/209 (51%), Gaps = 15/209 (7%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 QM +GV +P+V L S G +A Q ++ +GA +++ +R++G +L ++ Sbjct: 34 QMDRIGVGSIPIVFLASIFAGLDMALQFEVVMAPYGARALLGKVVTTSIIRDMGPVLASL 93 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 +++ R + I +E+G M ++IDA+R MG+D + L++PRI+A I+ +P+L+I +F A Sbjct: 94 VMSARVTAGISSELGMMNSTQQIDALRVMGVDPLDRLVAPRIFAGIVMMPILSISGDFLA 153 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF-------MACAIGIVAMKE 331 ++ + +P +F+S T N+ +K F + C G+ + Sbjct: 154 LLAGLGISMAVGHVPAPLFWSGVRDALTAQNLTDAFLKPLFFGFILTSIGCYYGMKSASG 213 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIII 360 F VG K TT V S +I I++ Sbjct: 214 AFGVG--------KSTTKAVVSAAIWILV 234 >gi|83952043|ref|ZP_00960775.1| ABC transporter, inner membrane subunit [Roseovarius nubinhibens ISM] gi|83837049|gb|EAP76346.1| ABC transporter, inner membrane subunit [Roseovarius nubinhibens ISM] Length = 261 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 10/225 (4%) Query: 156 LIRQMYY----------VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 LIR +Y +G +PVV + + TG +A Q ++F AE +++I Sbjct: 36 LIRPPFYGREFGAALIQIGWLSLPVVGMTALFTGGALALQIYAGGARFNAETVVPSIVAI 95 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 RE+G +L +M+A R S+I AEIG+MK+ E+IDA+ T+ + ++ L PR+ A + Sbjct: 96 GLTRELGPVLGGLMVAARVASSIAAEIGTMKVTEQIDALTTLSTNPMKYLTLPRVLAATL 155 Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325 ++P+L + + I+G +V D A + TL ++ +GLIK + Sbjct: 156 AVPVLVGVGDVLGIMGGFLVGVGRLDFGAATYLHNTLDFLTLWDVTSGLIKGAVFGFLVA 215 Query: 326 IVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 ++ G G + +G+ + VV + +++ + L +F+ Sbjct: 216 LMGCYFGMNSGRGAQGVGRATKSAVVAASVLILASNYLLTELFFS 260 >gi|167564342|ref|ZP_02357258.1| toluene tolerance ABC transporter, permease protein [Burkholderia oklahomensis EO147] gi|167571490|ref|ZP_02364364.1| toluene tolerance ABC transporter, permease protein [Burkholderia oklahomensis C6786] Length = 255 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 54/214 (25%), Positives = 118/214 (55%), Gaps = 1/214 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Q++++G ++ + G V+ QG + L+++G+E L+++ +RE+G +++A Sbjct: 42 KQVHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVSA 101 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+++ AEIG MK E++ A+ M +D ++ +I+PR+WA +I++PLL + + Sbjct: 102 LLFAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPLKNVIAPRMWAGVIAMPLLAAIFSAV 161 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 ++G +V + F+S+ + A++ G++K+ A+ +A+ +G+ Sbjct: 162 GVLGGYVVGVLLIGVDPGAFWSQMQGGVEVWADVGNGVLKSVVFGFAVTFIALFQGYEAK 221 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + T VV + V+ +D L F+ Sbjct: 222 PTPEGVSHATTKTVVYASLAVLGLDFLLTALMFS 255 >gi|298491186|ref|YP_003721363.1| hypothetical protein Aazo_2257 ['Nostoc azollae' 0708] gi|298233104|gb|ADI64240.1| protein of unknown function DUF140 ['Nostoc azollae' 0708] Length = 265 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 63/203 (31%), Positives = 108/203 (53%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + Q+ VG + + +L + GAV Q A + FGA ++++ RE+ +LT Sbjct: 42 LEQLAAVGPDSLFIALLTAVFVGAVFTIQVAREFINFGAGNLVGGVLAVALTRELTPVLT 101 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV++AGR GSA AEIG+M++ E+IDA+ + D + L+ PRI A ++ LP+LT+L+ Sbjct: 102 AVILAGRVGSAFAAEIGTMRVTEQIDALLILKTDPIDYLVIPRIIACLLMLPILTLLSLL 161 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + + G I+ Y++ VF + + +I + +IKA I I+ G Sbjct: 162 AGMFGGLIIATHIYNLSDTVFLDSARNFLDIWDICSAMIKAGCFGVLIAIIGCSWGLTTT 221 Query: 337 VHSNSLGKKVTTCVVQSISIVII 359 + +G+ TT VV ++ I+ I Sbjct: 222 GGAKGVGQSTTTAVVTALLIIFI 244 >gi|167645542|ref|YP_001683205.1| hypothetical protein Caul_1577 [Caulobacter sp. K31] gi|167347972|gb|ABZ70707.1| protein of unknown function DUF140 [Caulobacter sp. K31] Length = 268 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 109/210 (51%) Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211 F +RQ+ +G +PVV L + TGA + +F AE ++++ RE+ Sbjct: 49 FASQFLRQLVAIGFFSLPVVGLTAIFTGAALGLNIYTGGGRFNAEQVMPQIVALGITREL 108 Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271 G +L A+M+AGR +AI AEIG+M+ E+IDA+RT+ D R L++PR+ A + LPLLT Sbjct: 109 GPVLAALMLAGRVSAAIAAEIGAMRATEQIDAMRTLSTDPFRYLVAPRLLAATLVLPLLT 168 Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 ++A+ + G +V + D V+ + ++ +GLIKA + ++ Sbjct: 169 LVADVIGVAGGWLVAVRILDFNSTVYIRNTANFIQGWDVGSGLIKAAVFGFIVALMGCYH 228 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 G+ + +G+ T VV S ++ D Sbjct: 229 GYNAKGGARGVGRATTHAVVSSAILIFASD 258 >gi|255070247|ref|XP_002507205.1| ATP-binding cassette superfamily [Micromonas sp. RCC299] gi|226522480|gb|ACO68463.1| ATP-binding cassette superfamily [Micromonas sp. RCC299] Length = 297 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 63/217 (29%), Positives = 119/217 (54%), Gaps = 8/217 (3%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 ++Q+ VG + V +L S G V Q + S+ G L+ + RE+ ++ Sbjct: 83 LQQISRVGPDTLGVSMLTSSFVGMVFTIQFCKEFSKVGLTRVIGGLLGLAFTRELTPVIC 142 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A+++AGR GSA+ AE+G+M+++E++D +RT+G D V L++PR+ A +SLP+L+++ +F Sbjct: 143 AIVLAGRVGSAVAAELGTMQVSEQVDQLRTLGSDPVDYLVAPRVVACAVSLPILSVI-SF 201 Query: 277 SAIIGASIVIW--KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMA--CAIGIVAMKEG 332 + + ASI++ +Y P A+ S + L + G++ A A I I++ G Sbjct: 202 TIGMAASILLADIRYGISPNAIVDS---AAKYLESFDVGVMCAKGFAFGSVISIISCGWG 258 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+ T VV S+ + ++D ++F+F Sbjct: 259 QTTTGGAKGVGESTTASVVISLVAIFVVDFFLSMFFF 295 >gi|329114428|ref|ZP_08243190.1| Putative ABC transporter permease protein [Acetobacter pomorum DM001] gi|326696504|gb|EGE48183.1| Putative ABC transporter permease protein [Acetobacter pomorum DM001] Length = 321 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 52/172 (30%), Positives = 98/172 (56%), Gaps = 12/172 (6%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +PVV L + +G VIA Q +Q+ A+ ++ + RE+G +L +M+AGR G+A Sbjct: 118 LPVVALTALFSGGVIALQSYTGFAQYHAQSAIAGIVVLAVTRELGPVLAGLMVAGRVGAA 177 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA-SIVI 286 + A+IG+M++ ++IDA+ T+ + ++ L++PR+ A +I+LPLL ++A+ + G ++ + Sbjct: 178 MAAQIGTMRVTDQIDALTTLSTNPMKYLVAPRLLAGLIALPLLVLVADILGVAGGFTVAV 237 Query: 287 WKYYDIPFAVFFSRFHSTATLA-----NIFTGLIKAPFMACAIGIVAMKEGF 333 K F + + TATL ++ GL+KA I ++ G+ Sbjct: 238 VKLG------FSAPAYITATLNSLKAIDVTVGLVKAALFGFLIALMGCYYGY 283 >gi|73666683|ref|YP_302699.1| hypothetical protein Ecaj_0050 [Ehrlichia canis str. Jake] gi|72393824|gb|AAZ68101.1| protein of unknown function DUF140 [Ehrlichia canis str. Jake] Length = 265 Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 68/262 (25%), Positives = 125/262 (47%), Gaps = 22/262 (8%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 NL ++IG V F+ C+ C + G + ++++ + Sbjct: 23 NLIFNIGHSFVFFVKFVCN---------------CFMPPYYYGVIFKQFIEIFFFSL--- 64 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 P+V + + TGAV+ Q + + + F ++ + +RE+G +L ++IAGR G+AI Sbjct: 65 PIVGITAIFTGAVLILQNSLIIHNNVSGDFVSGVVVVAIVRELGPVLIGLIIAGRVGAAI 124 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG+M+I E+IDA+ T+ + + LI PRI + +I++PLL + A+ G IV Sbjct: 125 AAEIGTMRITEQIDALFTLDTNPFKYLIVPRIISAMIAMPLLILCADLIGAYGGYIV--G 182 Query: 289 YYDIPFA--VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 Y + + ++ + ++ GLIKA I + G+ + +G Sbjct: 183 SYQLGYTPEIYVRGIMKFLHVKDVILGLIKATVFGFIISFMGCYSGYYCSGGARGVGMAT 242 Query: 347 TTCVVQSISIVIIIDSLFAIFY 368 T VV S +I+++ + +FY Sbjct: 243 TYVVVVSSMFIILLNYVITVFY 264 >gi|313682719|ref|YP_004060457.1| hypothetical protein Sulku_1596 [Sulfuricurvum kujiense DSM 16994] gi|313155579|gb|ADR34257.1| protein of unknown function DUF140 [Sulfuricurvum kujiense DSM 16994] Length = 264 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/199 (30%), Positives = 102/199 (51%), Gaps = 4/199 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 ++ Q+ +G+ + V+ L + TG V A Q QFGAE F+ + RE+G + Sbjct: 47 VLTQIEVIGLGCMGVITLTALFTGMVEAIQLYNGFHQFGAENFTGYTIFYSISRELGPVF 106 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 ++M+ RS SA+ AE+G+M+++E+IDAI +G++ LI+PRI A +ISLPLL I + Sbjct: 107 ASLMLISRSISAMAAELGTMRVSEQIDAIDILGVNSKEYLITPRIIATVISLPLLVIWFD 166 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 F A+ A + I + +I TG+IK A G + G + Sbjct: 167 FIAVGSAYFISIGVLGINPVAYQDTLMRLGEFEDIMTGVIK----AAVFGFIVSSIGSYI 222 Query: 336 GVHSNSLGKKVTTCVVQSI 354 G H++ + V + ++ Sbjct: 223 GYHTSGGARGVGQSTIYAV 241 >gi|227206406|dbj|BAH57258.1| AT1G19800 [Arabidopsis thaliana] Length = 201 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 88/161 (54%) Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268 RE+ ++T++++AGR GSA AE+G+M+++E+ D +R +G D + LI+PR+ A ++LP Sbjct: 30 RELSPVITSIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADPIDYLITPRVIASCLALP 89 Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328 LT++ + ++++ Y I + H +I + +IK+ I +++ Sbjct: 90 FLTLMCFTVGMASSALLSDAVYGISINIIMDSAHRALRPWDIVSAMIKSQVFGAIISVIS 149 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 G + +G+ T+ VV S+ + I D + + F+F Sbjct: 150 CSWGVTTTGGAKGVGESTTSAVVMSLVGIFIADFVLSSFFF 190 >gi|15837022|ref|NP_297710.1| toluene tolerance protein [Xylella fastidiosa 9a5c] gi|9105260|gb|AAF83230.1|AE003893_7 toluene tolerance protein [Xylella fastidiosa 9a5c] Length = 249 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 74/127 (58%) Query: 145 SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204 SS + F LIR++Y +G +P++ + G V+ QG L+ +GA L+ Sbjct: 23 SSLPTRDFFAELIREIYKIGARSLPIIAVGGAFVGLVLTLQGYRTLTLYGASDALSTLLG 82 Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264 + RE+ +LTA++ GR+GS++ AE+ M+ ++I A+ M +D + ++PR WA I Sbjct: 83 LSLYRELAPVLTALLFIGRAGSSVAAELSLMRATDQIKALELMAIDPIAKAVAPRFWAAI 142 Query: 265 ISLPLLT 271 +++PLLT Sbjct: 143 LTVPLLT 149 >gi|302551013|ref|ZP_07303355.1| ABC transporter integral membrane protein [Streptomyces viridochromogenes DSM 40736] gi|302468631|gb|EFL31724.1| ABC transporter integral membrane protein [Streptomyces viridochromogenes DSM 40736] Length = 256 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 62/215 (28%), Positives = 106/215 (49%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I+Q ++V + L+S GAVIA Q Q GA+ FS + LRE ++T Sbjct: 37 IQQAWFVASVTIMPTALVSIPFGAVIALQIGSLTRQLGAQSFSGAASVLAVLREASPIVT 96 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++IAG G+AI A++G+ KI +EIDA++ +G+D V L+ PR+ A ++ LL L + Sbjct: 97 ALLIAGAGGTAICADLGARKIRDEIDAMQVLGIDPVHRLVVPRVLASMLVAVLLNGLVSV 156 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + G + + + F + A L++++ +KA GIVA +G Sbjct: 157 VGVAGGYFFNVVLQNGTPGAYLASFTTLAQLSDLWAAEVKALVFGAIAGIVASYKGLTAK 216 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +G V VV + ++ + + + YF + Sbjct: 217 GGPKGVGDAVNQSVVITFMLLFVTNFVMTAVYFQV 251 >gi|259416059|ref|ZP_05739979.1| membrane protein [Silicibacter sp. TrichCH4B] gi|259347498|gb|EEW59275.1| membrane protein [Silicibacter sp. TrichCH4B] Length = 260 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 106/200 (53%), Gaps = 7/200 (3%) Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 VG +PVV L + TG +A Q ++F AE +++I +RE+G +L +MIA Sbjct: 52 VGWLSLPVVALTAIFTGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAA 111 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 R S+I AEI +MK+ E+IDA+ T+ + ++ L++PR+ A +I++P+L + + I+G Sbjct: 112 RVTSSIAAEIATMKVTEQIDALVTLSTNPMKYLVAPRVLAALITVPVLVGVGDIIGIMGG 171 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 +V + D A + L +I + L+K A G +A G G+ S Sbjct: 172 YVVATETLDFNAAAYLKNTVDFLELRDIVSSLVK----GAAFGTIAALMGCYYGMQSGRG 227 Query: 343 GK---KVTTCVVQSISIVII 359 + + T V++ +++I+ Sbjct: 228 AQGVGRATKGSVEAAAVLIL 247 >gi|237708018|ref|ZP_04538499.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|237725290|ref|ZP_04555771.1| conserved hypothetical protein [Bacteroides sp. D4] gi|265754195|ref|ZP_06089384.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|229436556|gb|EEO46633.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] gi|229458004|gb|EEO63725.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|263234904|gb|EEZ20459.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 251 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 72/234 (30%), Positives = 117/234 (50%), Gaps = 20/234 (8%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G A + + F + +M +GV+ + +V+LISF GAVI Q + F Sbjct: 20 GRTFARPERMRMFFKQYLNEMVQLGVNSIGIVLLISFFIGAVITIQIKLNIESPWMPRFV 79 Query: 200 IDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 + + REI +L + +++AG+ GS I +EIG+M++ ++IDA+ MG++ Sbjct: 80 VGYTT----REIMLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALEIMGVNSAGY 135 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAVFFSRFHSTATLAN 309 LI P+I AL+ +P L I + FS IIGA W D+ + + +S F Sbjct: 136 LILPKIIALMTMIPFLVIFSIFSGIIGAFCTCWFGGVMNAEDLAYGLQYS-FQEWF---- 190 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 ++ IK+ F A I V+ G+ V S ++GK T VV S S++I+ L Sbjct: 191 VWCSFIKSIFFAFIISSVSAYFGYTVEGGSIAVGKASTDSVVMS-SVLILFSDL 243 >gi|150009005|ref|YP_001303748.1| ABC transporter permease [Parabacteroides distasonis ATCC 8503] gi|256840994|ref|ZP_05546501.1| ABC transporter permease [Parabacteroides sp. D13] gi|262383895|ref|ZP_06077031.1| ABC transporter permease [Bacteroides sp. 2_1_33B] gi|298375763|ref|ZP_06985719.1| membrane protein [Bacteroides sp. 3_1_19] gi|301312055|ref|ZP_07217977.1| putative membrane protein [Bacteroides sp. 20_3] gi|149937429|gb|ABR44126.1| conserved hypothetical protein, putative ABC transporter permease protein [Parabacteroides distasonis ATCC 8503] gi|256736837|gb|EEU50164.1| ABC transporter permease [Parabacteroides sp. D13] gi|262294793|gb|EEY82725.1| ABC transporter permease [Bacteroides sp. 2_1_33B] gi|298266800|gb|EFI08457.1| membrane protein [Bacteroides sp. 3_1_19] gi|300830157|gb|EFK60805.1| putative membrane protein [Bacteroides sp. 20_3] Length = 248 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 24/227 (10%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 ++ F LI+++Y +GV + +VI+IS G VIA Q + +S F+I + Sbjct: 24 RWSMFFKQLIKEIYKLGVDSLWIVIIISVFIGTVIAIQISLNISSPLIPKFTIGYTT--- 80 Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 REI +L + A+++AG+ GS I +EIG+M++ E+IDA+ MG++ LI P++ Sbjct: 81 -REIILLEFSSSIMALILAGKVGSNIASEIGTMRVTEQIDAMEIMGVNSANFLILPKMLG 139 Query: 263 LIISLPLLTILANFSAIIGASIVIWKY--------YDIPFAVFFSRFHSTATLANIFTGL 314 L+I +P+L I + F+ I+G + ++ +F+ F+ I+ + Sbjct: 140 LMIFIPVLVIFSMFTGIMGGIFASYSTSTGMTPSSFEYGLQFYFNEFY-------IWYSI 192 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 IK+ A I +A G+ V + +GK T VV S ++++ D Sbjct: 193 IKSVVYAFIISSIAAYFGYNVKGGALEVGKASTNAVVMSSIMILLAD 239 >gi|224535957|ref|ZP_03676496.1| hypothetical protein BACCELL_00821 [Bacteroides cellulosilyticus DSM 14838] gi|224522412|gb|EEF91517.1| hypothetical protein BACCELL_00821 [Bacteroides cellulosilyticus DSM 14838] Length = 247 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 70/243 (28%), Positives = 121/243 (49%), Gaps = 25/243 (10%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G I G A + + F I +M +GV+ + +V+LISF GAVI Q + Sbjct: 8 VGRYIMLMGRTFARPERMRMFFRQYINEMGQLGVNSIGIVLLISFFIGAVITIQIKLNIE 67 Query: 192 QFGAEIFSIDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 +++ ++ REI +L + +++AG+ GS I +E+G+M++ ++IDA+ Sbjct: 68 SPFMPRWTVGYVT----REIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEI 123 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAV---FF 298 MG++ LI P+I+A++ ++P L + F+ IIGA W D+ + + F Sbjct: 124 MGVNSANYLILPKIFAMVTTIPFLVTFSIFAGIIGAFATCWFGGIMSAVDLEYGLQYMFV 183 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 F I+ G+IK+ F A I V+ G+ V S +GK T VV S +++ Sbjct: 184 EWF--------IWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLIL 235 Query: 359 IID 361 D Sbjct: 236 FAD 238 >gi|258541792|ref|YP_003187225.1| ABC transporter permease [Acetobacter pasteurianus IFO 3283-01] gi|256632870|dbj|BAH98845.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-01] gi|256635927|dbj|BAI01896.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-03] gi|256638982|dbj|BAI04944.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-07] gi|256642036|dbj|BAI07991.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-22] gi|256645091|dbj|BAI11039.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-26] gi|256648146|dbj|BAI14087.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-32] gi|256651199|dbj|BAI17133.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654190|dbj|BAI20117.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-12] Length = 261 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 52/172 (30%), Positives = 98/172 (56%), Gaps = 12/172 (6%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +PVV L + +G VIA Q +Q+ A+ ++ + RE+G +L +M+AGR G+A Sbjct: 58 LPVVALTALFSGGVIALQSYTGFAQYHAQSAIAGIVVLAVTRELGPVLAGLMVAGRVGAA 117 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA-SIVI 286 + A+IG+M++ ++IDA+ T+ + ++ L++PR+ A +I+LPLL ++A+ + G ++ + Sbjct: 118 MAAQIGTMRVTDQIDALTTLSTNPMKYLVAPRLLAGLIALPLLVLVADILGVAGGFTVAV 177 Query: 287 WKYYDIPFAVFFSRFHSTATLA-----NIFTGLIKAPFMACAIGIVAMKEGF 333 K F + + TATL ++ GL+KA I ++ G+ Sbjct: 178 VKLG------FSAPAYITATLNSLKAIDVTVGLVKAALFGFLIALMGCYYGY 223 >gi|148240268|ref|YP_001225655.1| ABC-type transport system, permease component [Synechococcus sp. WH 7803] gi|147848807|emb|CAK24358.1| ABC-type transport system, permease component [Synechococcus sp. WH 7803] Length = 257 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 64/230 (27%), Positives = 109/230 (47%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G+ ++ + + + L+ Q+ G +VI+ S G V Q +LS GA+ Sbjct: 27 GQAVTATARGRINTVDLLDQLQEAGPGSFLIVIITSLAAGTVFNIQVTKELSSMGADATV 86 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 ++++ REI LLTA ++ G+ +A A++G+MK+ E+IDAI + D V L+ PR Sbjct: 87 GGVLAVGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTDPVEYLVVPR 146 Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319 + A+++ P+ +L AI A I + Y IP VF+ S +I LIKA Sbjct: 147 LIAMVVMAPVQCLLFFGVAIWSAQISSTELYAIPPEVFWMSVRSWLLPDDIPFMLIKALV 206 Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 I +++ G +G T VV + V ++D++ F Sbjct: 207 FGLQIAVLSCGWGMTTQGGPKEVGTSTTGAVVMILVTVALMDTVLTQILF 256 >gi|28199532|ref|NP_779846.1| toluene tolerance protein [Xylella fastidiosa Temecula1] gi|71274637|ref|ZP_00650925.1| Protein of unknown function DUF140 [Xylella fastidiosa Dixon] gi|71899306|ref|ZP_00681467.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1] gi|71899651|ref|ZP_00681805.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1] gi|170730903|ref|YP_001776336.1| toluene tolerance protein [Xylella fastidiosa M12] gi|182682267|ref|YP_001830427.1| hypothetical protein XfasM23_1749 [Xylella fastidiosa M23] gi|28057647|gb|AAO29495.1| toluene tolerance protein [Xylella fastidiosa Temecula1] gi|71164369|gb|EAO14083.1| Protein of unknown function DUF140 [Xylella fastidiosa Dixon] gi|71730603|gb|EAO32680.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1] gi|71730932|gb|EAO33002.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1] gi|167965696|gb|ACA12706.1| toluene tolerance protein [Xylella fastidiosa M12] gi|182632377|gb|ACB93153.1| protein of unknown function DUF140 [Xylella fastidiosa M23] gi|307578543|gb|ADN62512.1| hypothetical protein XFLM_02565 [Xylella fastidiosa subsp. fastidiosa GB514] Length = 249 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 74/127 (58%) Query: 145 SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204 SS + F LIR++Y +G +P++ + G V+ QG L+ +GA L+ Sbjct: 23 SSLPTRDFFAELIREIYKIGARSLPIIAVGGAFVGLVLTLQGYRTLTLYGASDALSTLLG 82 Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264 + RE+ +LTA++ GR+GS++ AE+ M+ ++I A+ M +D + ++PR WA + Sbjct: 83 LSLYRELAPVLTALLFIGRAGSSVAAELSLMRATDQIKALELMAIDPIAKAVAPRFWAAV 142 Query: 265 ISLPLLT 271 +++PLLT Sbjct: 143 LTVPLLT 149 >gi|110596847|ref|ZP_01385137.1| Protein of unknown function DUF140 [Chlorobium ferrooxidans DSM 13031] gi|110341534|gb|EAT59994.1| Protein of unknown function DUF140 [Chlorobium ferrooxidans DSM 13031] Length = 264 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/208 (29%), Positives = 113/208 (54%), Gaps = 2/208 (0%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 ++ Q G +P+V++ + GA++A + L FGA+ ++ +RE+G L Sbjct: 47 DVLDQATICGTDSIPIVLVSAISIGALLAIEVGNLLEDFGAKTMLGRSTALSVIRELGPL 106 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR-IWALIISLPLLTIL 273 L +M++ R GS AE+G+M+I+E+IDA+R G D + L+ PR + ALI+ LP LT L Sbjct: 107 LMGLMLSARFGSRNGAELGAMQISEQIDALRAFGTDPIAKLVMPRLVAALIMFLP-LTAL 165 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 ++F+ + A+ + Y+ I +F++ + + G +KAP A I +V+ GF Sbjct: 166 SDFAGLQSAAYMAEHYHRIDPGIFWNAVYPRLAPKDFVVGFLKAPVFAVIITLVSSFNGF 225 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIID 361 + + +G+ +V S +V+I + Sbjct: 226 SARGGTAGVGRATIKGIVVSSGLVLIAN 253 >gi|116789794|gb|ABK25388.1| unknown [Picea sitchensis] Length = 462 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/231 (25%), Positives = 118/231 (51%), Gaps = 2/231 (0%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G+ A +K K + ++Q+ VG V +L + G Q + ++ G Sbjct: 221 GQVIARVFKGKIHTRNTLQQLEVVGPGSSGVCLLTAAFVGMAFTIQFVREFTRLGLTRSV 280 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 ++++ RE+ ++T+++IAGR GSA AE+G+M+++E+ D +R +G D V LI PR Sbjct: 281 GGVLALAFSRELSPVVTSIIIAGRVGSAFAAELGTMQVSEQTDTLRVLGTDPVDYLIIPR 340 Query: 260 IWALIISLPLLTILANFSAIIGASIVIWK-YYDIPFAVFFSRFHSTATLANIFTGLIKAP 318 + A ++LP+LT++ FS + AS+++ Y++ + + +I + ++K+ Sbjct: 341 VIACCLALPILTLIC-FSVSLAASVLLADGVYNVSANIILESARRSLHPWDIISAMVKST 399 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 I +++ G + +G+ T+ VV S+ + I D + + +F Sbjct: 400 VFGGLISVISCAWGVTTLGGAKGVGESTTSAVVISLVCIFIADFILSWCFF 450 >gi|255014836|ref|ZP_05286962.1| ABC transporter permease [Bacteroides sp. 2_1_7] Length = 241 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 24/227 (10%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 ++ F LI+++Y +GV + +VI+IS G VIA Q + +S F+I + Sbjct: 17 RWSMFFKQLIKEIYKLGVDSLWIVIIISVFIGTVIAIQISLNISSPLIPKFTIGYTT--- 73 Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 REI +L + A+++AG+ GS I +EIG+M++ E+IDA+ MG++ LI P++ Sbjct: 74 -REIILLEFSSSIMALILAGKVGSNIASEIGTMRVTEQIDAMEIMGVNSANFLILPKMLG 132 Query: 263 LIISLPLLTILANFSAIIGASIVIWKY--------YDIPFAVFFSRFHSTATLANIFTGL 314 L+I +P+L I + F+ I+G + ++ +F+ F+ I+ + Sbjct: 133 LMIFIPVLVIFSMFTGIMGGIFASYSTSTGMTPSSFEYGLQFYFNEFY-------IWYSI 185 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 IK+ A I +A G+ V + +GK T VV S ++++ D Sbjct: 186 IKSVVYAFIISSIAAYFGYNVKGGALEVGKASTNAVVMSSIMILLAD 232 >gi|212690525|ref|ZP_03298653.1| hypothetical protein BACDOR_00007 [Bacteroides dorei DSM 17855] gi|212666874|gb|EEB27446.1| hypothetical protein BACDOR_00007 [Bacteroides dorei DSM 17855] Length = 248 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 72/234 (30%), Positives = 117/234 (50%), Gaps = 20/234 (8%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G A + + F + +M +GV+ + +V+LISF GAVI Q + F Sbjct: 17 GRTFARPERMRMFFKQYLNEMVQLGVNSIGIVLLISFFIGAVITIQIKLNIESPWMPRFV 76 Query: 200 IDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 + + REI +L + +++AG+ GS I +EIG+M++ ++IDA+ MG++ Sbjct: 77 VGYTT----REIMLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALEIMGVNSAGY 132 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAVFFSRFHSTATLAN 309 LI P+I AL+ +P L I + FS IIGA W D+ + + +S F Sbjct: 133 LILPKIIALMTMIPFLVIFSIFSGIIGAFCTCWFGGVMNAEDLAYGLQYS-FQEWF---- 187 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 ++ IK+ F A I V+ G+ V S ++GK T VV S S++I+ L Sbjct: 188 VWCSFIKSIFFAFIISSVSAYFGYTVEGGSIAVGKASTDSVVMS-SVLILFSDL 240 >gi|298384787|ref|ZP_06994346.1| membrane protein [Bacteroides sp. 1_1_14] gi|298261931|gb|EFI04796.1| membrane protein [Bacteroides sp. 1_1_14] Length = 247 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 65/227 (28%), Positives = 116/227 (51%), Gaps = 25/227 (11%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 + + F + +M +GV+ + +V+LISF GAVI Q + +++ ++ Sbjct: 24 RMRMFFRQYLNEMEQLGVNSIGIVLLISFFIGAVITIQIKLNIESPWMPRWTVGYVT--- 80 Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 REI +L + +++AG+ GS I +E+G+M++ ++IDA+ MG++ LI P+I A Sbjct: 81 -REIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGINSANYLILPKITA 139 Query: 263 LIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAV---FFSRFHSTATLANIFTGL 314 ++ +P+L + F+ IIGA W D+ + + F F I+ G+ Sbjct: 140 MVTVIPVLVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQYMFVEWF--------IWAGI 191 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 IK+ F A I V+ G+ V S ++GK T VV S +++ D Sbjct: 192 IKSLFFAFIIASVSAFFGYTVDGGSIAVGKASTDAVVSSSVLILFAD 238 >gi|29349246|ref|NP_812749.1| hypothetical protein BT_3838 [Bacteroides thetaiotaomicron VPI-5482] gi|253573093|ref|ZP_04850484.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|29341154|gb|AAO78943.1| putative ABC transporter [Bacteroides thetaiotaomicron VPI-5482] gi|251837316|gb|EES65416.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 247 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 65/227 (28%), Positives = 116/227 (51%), Gaps = 25/227 (11%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 + + F + +M +GV+ + +V+LISF GAVI Q + +++ ++ Sbjct: 24 RMRMFFRQYLNEMEQLGVNSIGIVLLISFFIGAVITIQIKLNIESPWMPRWTVGYVT--- 80 Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 REI +L + +++AG+ GS I +E+G+M++ ++IDA+ MG++ LI P+I A Sbjct: 81 -REIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGINSANYLILPKITA 139 Query: 263 LIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAV---FFSRFHSTATLANIFTGL 314 ++ +P+L + F+ IIGA W D+ + + F F I+ G+ Sbjct: 140 MVTVIPVLVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQYMFVEWF--------IWAGI 191 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 IK+ F A I V+ G+ V S ++GK T VV S +++ D Sbjct: 192 IKSLFFAFIIASVSAFFGYTVDGGSIAVGKASTDAVVSSSVLILFAD 238 >gi|124026456|ref|YP_001015571.1| putative transporter, membrane component [Prochlorococcus marinus str. NATL1A] gi|123961524|gb|ABM76307.1| possible transporter, membrane component [Prochlorococcus marinus str. NATL1A] Length = 249 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 64/219 (29%), Positives = 105/219 (47%), Gaps = 8/219 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI Q+ G +V++ G V Q A +LS+ G L++I REI LL Sbjct: 35 LIDQLMEAGPGSFLIVLITGIAAGTVFNIQVAAELSKQGLGSAVGGLLAIGMAREIAPLL 94 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL-- 273 TA ++ G+ +A A+IG+MK+ E+IDAI + D V L+ PR+ A+++ P+ +L Sbjct: 95 TATLLTGKVATAYAAQIGTMKVTEQIDAITMLQTDPVEYLVVPRLCAMVVMAPIQCLLFF 154 Query: 274 --ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 A FS ++I+ Y IP ++F++ +++ L+KA I I+A Sbjct: 155 SIALFSGQFSSTIL----YQIPPSIFWNSVREWLITSDLPFMLVKALVFGLLIAIIACGW 210 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G +G T VV ++ V ++D L F Sbjct: 211 GLTTRGGPKEVGSSTTGAVVMTLITVSLVDVLLTQVLFG 249 >gi|319900088|ref|YP_004159816.1| hypothetical protein Bache_0200 [Bacteroides helcogenes P 36-108] gi|319415119|gb|ADV42230.1| protein of unknown function DUF140 [Bacteroides helcogenes P 36-108] Length = 247 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 66/232 (28%), Positives = 117/232 (50%), Gaps = 19/232 (8%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G A + + F + ++ +GV+ + +V+LISF GAVI Q + ++ Sbjct: 16 GRVFARPERMRMFFRQYLNEVEQLGVNSIGIVLLISFFIGAVITIQIKLNIESPFMPRWT 75 Query: 200 IDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 + ++ REI +L + +++AG+ GS I +E+G+M++ ++IDA+ MG++ Sbjct: 76 VGYVT----REIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGVNSANY 131 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAVFFSRFHSTATLAN 309 LI P+I AL+ ++PL+ + F+ IIGA W D+ + + T Sbjct: 132 LILPKISALVTTIPLMVTFSIFAGIIGAFCTCWFGGIMSAVDLEYGL-----QYTFVEWF 186 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 I+ G+IK+ F A I V+ G+ V S +GK T VV S +++ D Sbjct: 187 IWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLILFAD 238 >gi|88807464|ref|ZP_01122976.1| possible transporter, membrane component [Synechococcus sp. WH 7805] gi|88788678|gb|EAR19833.1| possible transporter, membrane component [Synechococcus sp. WH 7805] Length = 257 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 64/230 (27%), Positives = 108/230 (46%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G+ ++ + + + L+ Q+ G +VI+ S G V Q +LS GA Sbjct: 27 GQAVTATVRGRINTVDLLDQLQEAGPGSFLIVIITSLAAGTVFNIQVTKELSSMGASATV 86 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 ++++ REI LLTA ++ G+ +A A++G+MK+ E+IDAI + D V L+ PR Sbjct: 87 GGVLAVGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTDPVEYLVVPR 146 Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319 + A+++ P+ +L AI A + Y IP VF+S S +I LIKA Sbjct: 147 LIAMVVMAPVQCLLFFGVAIWSAQWSSTELYMIPPQVFWSSVRSWLMPDDIPFMLIKALV 206 Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 I +++ G +G T VV + V ++D++ F Sbjct: 207 FGLQIAVLSCGWGMTTAGGPKEVGTSTTGAVVMILVTVALMDTVLTQLLF 256 >gi|255533344|ref|YP_003093716.1| hypothetical protein Phep_3461 [Pedobacter heparinus DSM 2366] gi|255346328|gb|ACU05654.1| protein of unknown function DUF140 [Pedobacter heparinus DSM 2366] Length = 244 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/140 (39%), Positives = 91/140 (65%), Gaps = 5/140 (3%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAE--IFSIDLMS 204 KFK +L ++ +QM ++GV + ++ +IS GAV+ Q AFQL S F + I S++ S Sbjct: 22 KFKIYLKAIFKQMDFIGVGSLGLIAIISTFIGAVMTLQIAFQLVSDFIPKTIIGSVNRDS 81 Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264 + E+ ++A+++AG+ GSAI +EIG+M+++E+IDA+ MG++ LI P+I A I Sbjct: 82 --SILELSPTISAIVLAGKIGSAISSEIGTMRVSEQIDALEIMGINSPGYLILPKIIAGI 139 Query: 265 ISLPLLTILANFSAIIGASI 284 +PLL I++ F +I G I Sbjct: 140 TMVPLLVIMSMFLSITGGYI 159 >gi|319791928|ref|YP_004153568.1| hypothetical protein Varpa_1241 [Variovorax paradoxus EPS] gi|315594391|gb|ADU35457.1| protein of unknown function DUF140 [Variovorax paradoxus EPS] Length = 260 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 54/219 (24%), Positives = 117/219 (53%), Gaps = 2/219 (0%) Query: 155 SLIR-QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 SL+R Q++++G + ++ + G V+ Q + L ++G+ L+++ +RE+G Sbjct: 42 SLVRDQIHFLGNYSLAIIGVSGLFVGFVLGLQMYYALQRYGSSEALGLLVTLSLVRELGP 101 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 ++ A++ GR+G+++ AEIG MK +E++ A+ M +D V+ +++PR WA +I++PLL + Sbjct: 102 VVAALLFTGRAGTSLTAEIGLMKADEQLSAMEMMAVDPVQRILAPRFWAGVITMPLLAAV 161 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 + I+G +V + F+ + + ++ G+IK+ + +A+ +G Sbjct: 162 FSAVGIMGGYVVGVLMLGVDPGAFWGQMQGGVDVWRDVGNGVIKSIVFGFTVTFIALLQG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 ++ + + T VV + V+ +D L F+I Sbjct: 222 YSAQPTPEGVSRATTRTVVTASLAVLGLDFLLTAMMFSI 260 >gi|33865118|ref|NP_896677.1| transporter, membrane component [Synechococcus sp. WH 8102] gi|33638802|emb|CAE07097.1| possible transporter, membrane component [Synechococcus sp. WH 8102] Length = 249 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/230 (26%), Positives = 112/230 (48%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G+ ++ + + + L Q+ G + +V++IS G+V Q A +L++ GA Sbjct: 18 GQAVTATLRGRINTVDLQDQLMEAGPGTLLIVLIISIAAGSVFNIQVAAELTRQGAGSTV 77 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 +++I REI LLT+ ++AG+ +A A++G+MK+ E+IDAI + D V L+ PR Sbjct: 78 GGILAIGLAREIAPLLTSCLLAGKVATAYAAQLGTMKVTEQIDAITMLRTDPVEYLVVPR 137 Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319 + A+++ P+ A+ I Y+IP AVF++ + ++ L+KA Sbjct: 138 MIAMVVMAPVQCFFFFLMAVWSGQITSTALYNIPPAVFWTSVRTWMDPTDLPFMLVKALV 197 Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 I ++A G +G T VV + +V I+D + F Sbjct: 198 FGLIIAVIACGWGLTTKGGPKEVGTSTTGAVVMILILVAIMDVVLTQVLF 247 >gi|78213612|ref|YP_382391.1| hypothetical protein Syncc9605_2096 [Synechococcus sp. CC9605] gi|78198071|gb|ABB35836.1| Protein of unknown function DUF140 [Synechococcus sp. CC9605] Length = 249 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 63/230 (27%), Positives = 112/230 (48%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G+ A++ + + L+ Q+ G V +V++IS G+V Q A +L++ GA Sbjct: 18 GQAVAATLRGRIDRGELLEQLLDAGPGSVLIVLIISVAAGSVFNIQVAAELTRQGAGSTV 77 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 +++I REI LLT+ ++AG+ +A A++G+MK+ E+IDAI + D V L+ PR Sbjct: 78 GGILAIGLAREIAPLLTSCLLAGKVATAYAAQLGTMKVTEQIDAITMLRTDPVEYLVVPR 137 Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319 + A+++ P+ A+ + Y+IP AVF++ + ++ L+KA Sbjct: 138 MIAMVVMAPVQCFFFFLVAVWSGQLTSTALYNIPPAVFWTSVRTWMAPLDLPFMLVKAVV 197 Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 I VA G +G T VV + +V ++D + F Sbjct: 198 FGMIIATVACGWGLTTRGGPKEVGTSTTGAVVMILILVALMDVVLTQVLF 247 >gi|163797504|ref|ZP_02191455.1| hypothetical protein BAL199_23507 [alpha proteobacterium BAL199] gi|159177253|gb|EDP61812.1| hypothetical protein BAL199_23507 [alpha proteobacterium BAL199] Length = 282 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 44/120 (36%), Positives = 77/120 (64%), Gaps = 4/120 (3%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE--IFSIDLMSILQLREIGVLL 215 RQ +G +PVV L + +G V+A Q ++F AE + ++ ++SI RE+ +L Sbjct: 69 RQFLEIGYYSLPVVGLTTLFSGMVLALQSYSGFARFSAESAVATVVVLSIT--RELAPVL 126 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 +M+AGR G+A+ AEIG+M++ E+IDA+ T+ + + LI+PR+ A +SLP+L ++ + Sbjct: 127 AGLMVAGRVGAAMAAEIGTMRVTEQIDALTTLSTNPFKYLIAPRLIAATLSLPILVLIGD 186 >gi|87303089|ref|ZP_01085887.1| possible transporter, membrane component [Synechococcus sp. WH 5701] gi|87282256|gb|EAQ74216.1| possible transporter, membrane component [Synechococcus sp. WH 5701] Length = 249 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 68/242 (28%), Positives = 114/242 (47%), Gaps = 2/242 (0%) Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 H LG + G+ ++ K + L L QM G +VI+ + G V Q A + Sbjct: 8 HRLGSSVMIGGQSISALAKGRINLNDLFEQMLEAGPGSFLIVIITALAAGTVFNIQVAAE 67 Query: 190 LSQFGAEIFSIDLMSILQL-REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L++ GA FS+ + L L REI LLTA ++ G+ +A A++G+MK+ E+IDAI + Sbjct: 68 LTRQGAG-FSVGGILALGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLR 126 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 D V L+ PR+ A+++ P+ +L I + Y IP VF++ + + Sbjct: 127 TDPVEYLVVPRVLAMVVMAPVQCLLFFVVGIWSGQVSSTFLYSIPPTVFWNSVRTWMEPS 186 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 ++ + L+KA I ++A G +G T VV + V ++D + Sbjct: 187 DLPSMLVKALVFGLQIAVIACGWGLTTRGGPKEVGTSTTGAVVMILVTVSLVDVVLTQVL 246 Query: 369 FA 370 F Sbjct: 247 FG 248 >gi|225433662|ref|XP_002265320.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 474 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 61/222 (27%), Positives = 113/222 (50%), Gaps = 16/222 (7%) Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 ++ ++Q+ VG V V IL + G Q + ++ G ++++ RE+ Sbjct: 248 VNTLQQLERVGPRSVGVCILTAAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSRELSP 307 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 ++T++++AGR GSA AE+G+M+++E+ D +R +G + V L++PR+ A I+LP LT+L Sbjct: 308 VVTSIVVAGRIGSAFAAELGTMQVSEQTDTLRVLGTNPVDYLVTPRVIASCIALPFLTLL 367 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA-------PFMACAIGI 326 + ++++ Y I + +I + +IK+ ++CA G+ Sbjct: 368 CFTVGMASSALLADSVYGISINIILDSAQRALNSWDIISAMIKSVAFGGIISTVSCAWGV 427 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 M G A GV G+ T+ VV S+ + I D FA+ Y Sbjct: 428 TTM--GGAKGV-----GESTTSAVVISLVGIFIAD--FALSY 460 >gi|170077985|ref|YP_001734623.1| hypothetical protein SYNPCC7002_A1371 [Synechococcus sp. PCC 7002] gi|169885654|gb|ACA99367.1| conserved hypothetical protein TIGR00056 [Synechococcus sp. PCC 7002] Length = 264 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 69/217 (31%), Positives = 109/217 (50%), Gaps = 8/217 (3%) Query: 157 IRQMYYVGVSGVPVVILISFVT----GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 I QM VG P +LI+ VT G V Q A + FGA ++ + RE+ Sbjct: 43 IEQMAAVG----PDSLLIALVTAGFVGMVFTIQVAREFIYFGAGTAVGGVLGLSLSRELA 98 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 +LTAV++AGR GSA AEIG+M++ E+IDA+ + D + L+ PR A + LPLLT+ Sbjct: 99 PVLTAVVLAGRVGSAFAAEIGTMRVTEQIDALHILRTDPIDYLVVPRFLACCLMLPLLTV 158 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 L+ + + G I+ Y IP ++F + S +I + +IK+ I ++ G Sbjct: 159 LSLLTGMAGGLIIAINLYQIPQSIFINSAQSFLEYWDIISAMIKSVVFGGLIAVIGCSWG 218 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+ TT VV S+ + I + + F Sbjct: 219 LTTTGGAKGVGQSTTTAVVTSLLAIFIANFFLSWLMF 255 >gi|303270959|ref|XP_003054841.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545] gi|226462815|gb|EEH60093.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545] Length = 251 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 62/215 (28%), Positives = 115/215 (53%), Gaps = 4/215 (1%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I+Q+ VG + V +L S G V Q + S+ G L+ + RE+ ++ Sbjct: 39 IQQIARVGPDTLGVAMLTSSFVGMVFTIQFCKEFSKVGLTRVIGGLLGLAFTRELTPVIC 98 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A+++AGR GSAI AE+G+M+++E++D +RT+G D V L++PR+ A +SLP+L+++ +F Sbjct: 99 AIVLAGRVGSAIAAELGTMQVSEQVDQLRTLGSDPVDYLVAPRVVACALSLPILSVV-SF 157 Query: 277 SAIIGASIVI--WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 + + ASI++ +Y P A+ S T ++I +K I ++ G Sbjct: 158 TIGMAASILLADLRYGISPNAIVDSAAKYLET-SDIGVMCVKGLAFGGVIATISCGWGQT 216 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+ T VV S+ + ++D ++ +F Sbjct: 217 TTGGAKGVGESTTASVVISLVAIFVVDFFLSMIFF 251 >gi|160882382|ref|ZP_02063385.1| hypothetical protein BACOVA_00331 [Bacteroides ovatus ATCC 8483] gi|237719054|ref|ZP_04549535.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|260172011|ref|ZP_05758423.1| hypothetical protein BacD2_09110 [Bacteroides sp. D2] gi|299148138|ref|ZP_07041200.1| putative membrane protein [Bacteroides sp. 3_1_23] gi|315920324|ref|ZP_07916564.1| conserved hypothetical protein [Bacteroides sp. D2] gi|156112195|gb|EDO13940.1| hypothetical protein BACOVA_00331 [Bacteroides ovatus ATCC 8483] gi|229451433|gb|EEO57224.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|298512899|gb|EFI36786.1| putative membrane protein [Bacteroides sp. 3_1_23] gi|313694199|gb|EFS31034.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 247 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 65/228 (28%), Positives = 119/228 (52%), Gaps = 24/228 (10%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 + + F + ++ +GV+ + +V+LISF GAVI Q + +++ ++ Sbjct: 24 RMRMFFRQYLNELEQLGVNSIGIVLLISFFIGAVITIQIKLNIESPWMPRWTVGYVT--- 80 Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 REI +L + +++AG+ GS I +E+G+M++ ++IDA+ MG++ LI P+I A Sbjct: 81 -REIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGINSANYLILPKITA 139 Query: 263 LIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAV--FFSRFHSTATLANIFTGLI 315 ++ +P+L + F+ IIGA W D+ + + F+ + I+ G+I Sbjct: 140 MVTVIPILVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQYMFNEWF-------IWAGII 192 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 K+ F A I V+ G+ V S ++GK T VV S S++I+ L Sbjct: 193 KSLFFAFIIASVSAFFGYTVEGGSIAVGKASTDAVVSS-SVLILFSDL 239 >gi|160890565|ref|ZP_02071568.1| hypothetical protein BACUNI_03008 [Bacteroides uniformis ATCC 8492] gi|270295705|ref|ZP_06201905.1| conserved hypothetical protein [Bacteroides sp. D20] gi|317479890|ref|ZP_07939007.1| hypothetical protein HMPREF1007_02124 [Bacteroides sp. 4_1_36] gi|156859564|gb|EDO52995.1| hypothetical protein BACUNI_03008 [Bacteroides uniformis ATCC 8492] gi|270273109|gb|EFA18971.1| conserved hypothetical protein [Bacteroides sp. D20] gi|316903964|gb|EFV25801.1| hypothetical protein HMPREF1007_02124 [Bacteroides sp. 4_1_36] Length = 247 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 66/235 (28%), Positives = 118/235 (50%), Gaps = 25/235 (10%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G A + + F + ++ +GV+ + +V+LISF GAVI Q + ++ Sbjct: 16 GRVFARPERMRMFFRQYVNELEQLGVNSIGIVLLISFFIGAVITIQIKLNIESPFMPRWT 75 Query: 200 IDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 + ++ REI +L + +++AG+ GS I +E+G+M++ ++IDA+ MG++ Sbjct: 76 VGYVT----REIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGVNSANY 131 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAV---FFSRFHSTAT 306 LI P+I A++ ++PL+ + F+ IIGA W D+ + + F F Sbjct: 132 LILPKIAAMVTTIPLMVTFSIFAGIIGAFCTCWFGGIMSAVDLEYGLQYMFVEWF----- 186 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 I+ G+IK+ F A I V+ G+ V S +GK T VV S +++ D Sbjct: 187 ---IWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLILFAD 238 >gi|213027514|ref|ZP_03341961.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 152 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 42/107 (39%), Positives = 69/107 (64%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y VGV + ++I+ G V+ QG L+ + AE L+++ LRE+G ++ Sbjct: 44 LVRQLYNVGVLSMLIIIVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVV 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 A++ AGR+GSA+ AEIG M+ E++ ++ M +D +R +ISPR WA Sbjct: 104 AALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWA 150 >gi|284034024|ref|YP_003383955.1| hypothetical protein Kfla_6153 [Kribbella flavida DSM 17836] gi|283813317|gb|ADB35156.1| protein of unknown function DUF140 [Kribbella flavida DSM 17836] Length = 257 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 1/217 (0%) Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 L ++Q ++V + L++ GAVIA Q + QFGA+ F+ + +RE Sbjct: 33 LREFLQQAWFVASVTIIPTALVAIPFGAVIALQVGGLIQQFGAQAFTGSAAVLAVVREAS 92 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 + TA++IAG GSAI A++GS KI EE+DA+ +G+D + L+ PR+ A ++ L Sbjct: 93 PIATALLIAGAGGSAICADLGSRKIREELDAMMVLGIDPIHRLVVPRVLATMLVAFFLNG 152 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 + ++G + D + + F + A L +++ G KA +VA +G Sbjct: 153 FVSVVGVMGGYVFNVVLQDGTPGAYIASFTALAHLPDLWQGQAKALVFGFIAAVVASYKG 212 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIID-SLFAIFY 368 G +G V VV + ++ + + S+ AI++ Sbjct: 213 VNAGGGPKGVGDAVNQSVVITFMLLFVANFSMTAIYF 249 >gi|317125894|ref|YP_004100006.1| hypothetical protein Intca_2778 [Intrasporangium calvum DSM 43043] gi|315589982|gb|ADU49279.1| protein of unknown function DUF140 [Intrasporangium calvum DSM 43043] Length = 256 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 64/220 (29%), Positives = 111/220 (50%), Gaps = 10/220 (4%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I+Q +++ + L+S GAVIA Q Q GA+ ++ + LRE ++T Sbjct: 37 IQQSWFLASVTILPTALVSIPFGAVIALQLGTLTRQLGAQSYTGAASVLAVLREASPIVT 96 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++IAG GSAI A++GS KI EEIDA+ +G+ ++ L+ PR+ A + L+ +L N Sbjct: 97 ALLIAGAGGSAICADLGSRKIREEIDAMEVLGISPIQRLVVPRVLASM----LVAVLLNG 152 Query: 277 SAIIGASIVIWKYYDI-----PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 + + + + I P A + + F + A L +++ G +KA GIVA + Sbjct: 153 LVSVVGVVGGYVFNVIVQGGTPGA-YIASFTAMAQLPDLWAGELKALVFGAIAGIVAAHK 211 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 G G +G V VV + ++ +++ + YF + Sbjct: 212 GLTAGGGPKGVGDAVNQSVVITFMLLFVVNFVITAVYFQV 251 >gi|167946701|ref|ZP_02533775.1| hypothetical protein Epers_09188 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 258 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 56/211 (26%), Positives = 104/211 (49%), Gaps = 2/211 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I Q+ + G+ +P + +++ G + Q F FG E L++ L E G LLT Sbjct: 46 ITQLIFSGIDALPTITILALAVGLSVTTQLIFAAQVFGQEADVASLLANLVALEFGSLLT 105 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI-LAN 275 A+++ GRSGSAI ++G+M +N E++ + +G+D +SPR+ ++I+ +L I + Sbjct: 106 AIVMIGRSGSAIAVDLGNMSLNREVEGLELLGIDVHAFFVSPRLIGMVIAQLVLAIYFSA 165 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 FS + G ++ F F+ + L ++ IK IG A +G +V Sbjct: 166 FSLVTGITLAALLESTSNFKYLFAVVSAFEPL-DLLLFFIKNLLFGLVIGANACLKGLSV 224 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 G + + +V S+ +V ++D +F + Sbjct: 225 GQSVTQVPQVTQKAIVNSLVMVFVLDGVFVL 255 >gi|237712741|ref|ZP_04543222.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262408122|ref|ZP_06084669.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|293369494|ref|ZP_06616073.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f] gi|294644221|ref|ZP_06721991.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a] gi|294808601|ref|ZP_06767341.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b] gi|298480165|ref|ZP_06998363.1| membrane protein [Bacteroides sp. D22] gi|229447218|gb|EEO53009.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262353674|gb|EEZ02767.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292635379|gb|EFF53892.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f] gi|292640431|gb|EFF58679.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a] gi|294444200|gb|EFG12927.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b] gi|298273446|gb|EFI15009.1| membrane protein [Bacteroides sp. D22] Length = 247 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 64/227 (28%), Positives = 116/227 (51%), Gaps = 25/227 (11%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 + + F + ++ +GV+ + +V+LISF GAVI Q + +++ ++ Sbjct: 24 RMRMFFRQYLNELEQLGVNSIGIVLLISFFIGAVITIQIKLNIESPWMPRWTVGYVT--- 80 Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 REI +L + +++AG+ GS I +E+G+M++ ++IDA+ MG++ LI P+I A Sbjct: 81 -REIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGINSANYLILPKITA 139 Query: 263 LIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAV---FFSRFHSTATLANIFTGL 314 ++ +P+L + F+ IIGA W D+ + + F F I+ G+ Sbjct: 140 MVTVIPILVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQYMFVEWF--------IWAGI 191 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 IK+ F A I V+ G+ V S ++GK T VV S +++ D Sbjct: 192 IKSLFFAFIIASVSAFFGYTVDGGSIAVGKASTDAVVSSSVLILFAD 238 >gi|51210044|ref|YP_063708.1| conserved hypothetical plastid protein [Gracilaria tenuistipitata var. liui] gi|50657798|gb|AAT79783.1| conserved hypothetical plastid protein [Gracilaria tenuistipitata var. liui] Length = 252 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 58/216 (26%), Positives = 107/216 (49%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 S++ Q+ VG + +VI+ +F G V Q + A +++I +RE+ + Sbjct: 28 SVLEQIKIVGPDSLNIVIITAFFLGMVFTIQIVKEFLYINAAALIGSVLTIAFIRELSPV 87 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 LT+V+I GR S AE+ +M + E+++A+ + + ++ L+ PR+ A I+ LP L I + Sbjct: 88 LTSVIIVGRIASYFTAELATMSVTEQLNALYLLETNPLKYLVLPRVIACILMLPCLNIFS 147 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 +++ +S + + Y I +FF S+ + +IF L+K I ++ G Sbjct: 148 FITSLFSSSFICFTVYSIHPEIFFVSSFSSLIVQDIFKSLLKTIVFGFLIASISCFWGLK 207 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +GK T VV S+ V I D L + F+ Sbjct: 208 ATGGAKGVGKSTTLSVVTSLLAVFIFDFLLSYIMFS 243 >gi|295088056|emb|CBK69579.1| ABC-type transport system involved in resistance to organic solvents, permease component [Bacteroides xylanisolvens XB1A] Length = 235 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 64/227 (28%), Positives = 116/227 (51%), Gaps = 25/227 (11%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 + + F + ++ +GV+ + +V+LISF GAVI Q + +++ ++ Sbjct: 12 RMRMFFRQYLNELEQLGVNSIGIVLLISFFIGAVITIQIKLNIESPWMPRWTVGYVT--- 68 Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 REI +L + +++AG+ GS I +E+G+M++ ++IDA+ MG++ LI P+I A Sbjct: 69 -REIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGINSANYLILPKITA 127 Query: 263 LIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAV---FFSRFHSTATLANIFTGL 314 ++ +P+L + F+ IIGA W D+ + + F F I+ G+ Sbjct: 128 MVTVIPILVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQYMFVEWF--------IWAGI 179 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 IK+ F A I V+ G+ V S ++GK T VV S +++ D Sbjct: 180 IKSLFFAFIIASVSAFFGYTVDGGSIAVGKASTDAVVSSSVLILFAD 226 >gi|99081621|ref|YP_613775.1| hypothetical protein TM1040_1780 [Ruegeria sp. TM1040] gi|99037901|gb|ABF64513.1| protein of unknown function DUF140 [Ruegeria sp. TM1040] Length = 260 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 108/207 (52%), Gaps = 7/207 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L + VG +PVV L + TG +A Q ++F AE +++I +RE+G +L Sbjct: 45 LANALLQVGWLSLPVVALTAIFTGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVL 104 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 +MIA R S+I AEI +M++ E+IDA+ T+ + ++ L++PR+ A ++++P+L + + Sbjct: 105 VGLMIAARVTSSIAAEIATMRVTEQIDALVTLSTNPMKYLVAPRVLAALLTVPVLVGVGD 164 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I+G +V + D A + L +I + L+K A G +A G Sbjct: 165 IIGIMGGYVVATETLDFNAAAYLKNTVDFLELRDIVSSLVK----GAAFGTIAALMGCYY 220 Query: 336 GVHSNSLGK---KVTTCVVQSISIVII 359 G+ S + + T V++ +++I+ Sbjct: 221 GMQSGRGAQGVGRATKGSVEAAAVLIL 247 >gi|226305212|ref|YP_002765170.1| YrbE family protein [Rhodococcus erythropolis PR4] gi|229490705|ref|ZP_04384543.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] gi|226184327|dbj|BAH32431.1| putative YrbE family protein [Rhodococcus erythropolis PR4] gi|229322525|gb|EEN88308.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] Length = 264 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 67/259 (25%), Positives = 131/259 (50%), Gaps = 9/259 (3%) Query: 116 KKIVKFINDSCSQA-HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 ++ +N + +QA +I+ L + ++F+ F I Q +++ + L+ Sbjct: 6 NSVLSPVNGALTQAGNIVELFVDVVRNTFRRPFQFREF----IEQAWFIASVTILPTALV 61 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 + GAV++ Q + Q GAE F+ + +++ L+TA+++AG +GSA+ A++GS Sbjct: 62 AIPFGAVVSLQTGSLIKQLGAESFTGAASVLAVIQQGSPLVTALLVAGAAGSAVTADLGS 121 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI--VIWKYYDI 292 I EEIDA+ +G++ ++ L+ PR+ A+++ LL L + I G VI + + Sbjct: 122 RTIREEIDAMEVLGINPIQRLVVPRVLAMVLIAVLLNGLVSVVGIAGGYFFNVILQGGN- 180 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 P A + S F + A L +I++G IKA G+++ +G +G+ V VV Sbjct: 181 PGA-YISSFSAFAQLPDIWSGEIKAAVFGVIAGVISAYKGLHPSGGPKGVGEAVNQAVVI 239 Query: 353 SISIVIIIDSLFAIFYFAI 371 + ++ + + + Y I Sbjct: 240 TFLLLFFANLILTMVYLQI 258 >gi|163739574|ref|ZP_02146983.1| hypothetical protein RGBS107_12532 [Phaeobacter gallaeciensis BS107] gi|163741440|ref|ZP_02148831.1| membrane protein [Phaeobacter gallaeciensis 2.10] gi|161385174|gb|EDQ09552.1| membrane protein [Phaeobacter gallaeciensis 2.10] gi|161387033|gb|EDQ11393.1| hypothetical protein RGBS107_12532 [Phaeobacter gallaeciensis BS107] Length = 266 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 7/207 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+ + VG +PVV L + TGA +A Q ++F AE +++I +RE+G +L Sbjct: 51 LLNALLQVGWLSLPVVGLTAIFTGAALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVL 110 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 +MIA R S+I AEI +MK+ E+IDA+ T+ ++ L++PR+ A +I++P+L + + Sbjct: 111 VGLMIAARVTSSIAAEIATMKVTEQIDALVTLSTHPMKYLVAPRVLAALITVPVLVGVGD 170 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I+G +V + A + L +I + L+K A G +A G Sbjct: 171 IIGIMGGYVVATQNLGFNPAAYLKNTVDFLELRDIVSSLVK----GAAFGTIAATMGCYY 226 Query: 336 GVHSNSLGKKV---TTCVVQSISIVII 359 G+ S + V T V++ +++I+ Sbjct: 227 GMQSGRGAQGVGRATKGSVEAAAVLIL 253 >gi|189463681|ref|ZP_03012466.1| hypothetical protein BACINT_00012 [Bacteroides intestinalis DSM 17393] gi|189438631|gb|EDV07616.1| hypothetical protein BACINT_00012 [Bacteroides intestinalis DSM 17393] Length = 247 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 69/243 (28%), Positives = 120/243 (49%), Gaps = 25/243 (10%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G I G A + + F + +M +GV+ + +V+LISF GAVI Q + Sbjct: 8 VGRYIMLMGRTFARPERMRMFFRQYLNEMGQLGVNSIGIVLLISFFIGAVITIQIKLNIE 67 Query: 192 QFGAEIFSIDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 +++ ++ REI +L + +++AG+ GS I +E+G+M++ ++IDA+ Sbjct: 68 SPFMPRWTVGYVT----REIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEI 123 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAV---FF 298 MG++ LI P+I A++ ++P L + F+ IIGA W D+ + + F Sbjct: 124 MGVNSANYLILPKICAMVTTIPFLVTFSIFAGIIGAFATCWFGGIMSAVDLEYGLQYMFV 183 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 F I+ G+IK+ F A I V+ G+ V S +GK T VV S +++ Sbjct: 184 EWF--------IWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLIL 235 Query: 359 IID 361 D Sbjct: 236 FAD 238 >gi|33863666|ref|NP_895226.1| putative transporter, membrane component [Prochlorococcus marinus str. MIT 9313] gi|33635249|emb|CAE21574.1| possible transporter, membrane component [Prochlorococcus marinus str. MIT 9313] Length = 248 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 62/231 (26%), Positives = 110/231 (47%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G+ A++ + + + L Q+ G +V++ G V Q A +LS+ GA Sbjct: 18 GQAVAATARGRINKVDLFDQLMEAGPGSFLIVLITGLAAGTVFNIQVAAELSRQGAGSTV 77 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 +++I REI LLTA ++ G+ +A A++G+MK+ E+IDAI + + V L+ PR Sbjct: 78 GGILAIGMAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTEPVEYLVVPR 137 Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319 + A+++ P+ IL A+ + Y IP VF++ + T ++ LIK+ Sbjct: 138 VIAMVVMAPVQCILFFGIALWSGQVSSTNLYQIPPEVFWNSVRTWLTPDDLPFMLIKSLV 197 Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 I ++A G +G T VV ++ V ++D L F+ Sbjct: 198 FGLQIAVLACGWGLTTRGGPKEVGTSTTGAVVMTLVTVSLMDVLLTQILFS 248 >gi|312141010|ref|YP_004008346.1| integral membrane protein yrbe4a [Rhodococcus equi 103S] gi|325675353|ref|ZP_08155037.1| ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] gi|311890349|emb|CBH49667.1| putative integral membrane protein YrbE4A [Rhodococcus equi 103S] gi|325553324|gb|EGD23002.1| ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] Length = 264 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 65/258 (25%), Positives = 130/258 (50%), Gaps = 11/258 (4%) Query: 118 IVKFINDSCSQA-HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 ++K +N + +QA +I+ L + ++FK F I Q +++ + L++ Sbjct: 8 LMKPVNGALTQAGNIVQLFVDVVRNTFKRPFQFKEF----IEQAWFIASVTILPTALVAI 63 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 GAV++ Q + Q GAE F+ + +++ ++TA++IAG +GSA+ A++GS Sbjct: 64 PFGAVVSLQTGSLIKQLGAESFTGAASVLAVIQQGSPIVTALLIAGAAGSAVTADLGSRT 123 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA---SIVIWKYYDIP 293 I EEIDA+ +G++ V+ L+ PR+ A+++ LL L + I G ++++ P Sbjct: 124 IREEIDAMEVLGINPVQRLVVPRVLAMVLVAVLLNGLVSVVGIAGGYFFNVILQG--GTP 181 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 A + + F + A L +++ +KA G++A +G +G+ V VV + Sbjct: 182 GA-YLASFSALAQLPDLYIAEVKAAIFGVIAGVIAAYKGLTPKGGPKGVGEAVNQAVVIT 240 Query: 354 ISIVIIIDSLFAIFYFAI 371 ++ + + + Y I Sbjct: 241 FLVLFFANLILTMVYLQI 258 >gi|87123683|ref|ZP_01079533.1| possible transporter, membrane component [Synechococcus sp. RS9917] gi|86168252|gb|EAQ69509.1| possible transporter, membrane component [Synechococcus sp. RS9917] Length = 248 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 63/231 (27%), Positives = 110/231 (47%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G+ A++ + + + L Q+ G +VI+ G+V Q A +LS+ GA Sbjct: 18 GQAVAATARGRINTIDLFDQLLEAGPGSFLIVIITGIAAGSVFNIQVAAELSRQGAGSTV 77 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 ++++ REI LLTA ++ G+ +A A++G+MK+ E+IDAI + D V L+ PR Sbjct: 78 GGILALGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTDPVEYLVVPR 137 Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319 + A+++ P+ +L AI I + Y IP +VF++ + ++ LIKA Sbjct: 138 LIAMVVMAPVQCLLFFGVAIWSGQITSTELYSIPPSVFWTSVRTWMQPDDLPFMLIKALV 197 Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 I +++ G +G T VV + V ++D L F Sbjct: 198 FGLQIAVLSCGWGLTTEGGPKEVGTSTTGSVVMILVTVALMDVLLTQILFG 248 >gi|84494809|ref|ZP_00993928.1| putative ABC transporter integral membrane protein [Janibacter sp. HTCC2649] gi|84384302|gb|EAQ00182.1| putative ABC transporter integral membrane protein [Janibacter sp. HTCC2649] Length = 203 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 12/199 (6%) Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GAVIA Q Q GA+ F+ + +RE ++TA++IAG GSAI A++GS KI Sbjct: 6 GAVIALQLGTLTRQLGAQSFTGAASVLAVVREASPIVTALLIAGAGGSAICADLGSRKIR 65 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI------ 292 EE+DA+ +G+ ++ L+ PR+ A + L+ +L N + + ++++ Sbjct: 66 EELDAMEVLGISPIQRLVVPRVLATM----LVAVLLNGLVSVVGVGGGY-FFNVVIQGGT 120 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 P A + + F + A LA+++T IKA IVA +G G +G V VV Sbjct: 121 PGA-YLASFTALAQLADLWTSEIKALLFGAVAAIVASYKGLTAGGGPKGVGDAVNQSVVI 179 Query: 353 SISIVIIIDSLFAIFYFAI 371 + ++ +I+ + + YF + Sbjct: 180 TFMLLFVINFVISAIYFQV 198 >gi|116071211|ref|ZP_01468480.1| hypothetical protein BL107_16235 [Synechococcus sp. BL107] gi|116066616|gb|EAU72373.1| hypothetical protein BL107_16235 [Synechococcus sp. BL107] Length = 249 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 62/230 (26%), Positives = 111/230 (48%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G+ ++ + + + L Q+ G + +V++IS G+V Q A +L++ GA Sbjct: 18 GQAVTATMRGRINTVELSDQLMEAGPGSLLIVLIISVAAGSVFNIQVAAELTRQGAGSTV 77 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 ++++ REI LLTA ++AG+ +A A++G+MK+ E+IDAI + D V L+ PR Sbjct: 78 GGILALGLAREIAPLLTACLLAGKVATAYAAQLGTMKVTEQIDAITMLRTDPVEYLVVPR 137 Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319 + AL++ PL A+ I Y+IP +VF++ + ++ L+KA Sbjct: 138 LIALVVMAPLQCFFFFIVAVWSGQITSTALYNIPPSVFWTSVRTWMHPEDLPFMLVKAVV 197 Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 I ++ G +G T VV + +V I+D + F Sbjct: 198 FGLIIATISCGWGLTTRGGPKEVGTSTTGAVVMILILVCIMDVVLTQVLF 247 >gi|301167973|emb|CBW27559.1| putative membrane protein [Bacteriovorax marinus SJ] Length = 292 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 66/220 (30%), Positives = 119/220 (54%), Gaps = 14/220 (6%) Query: 147 YKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSID----- 201 Y+FK F Q Y++G + ++ L TG V+A Q + FG ++ ++D Sbjct: 71 YRFKLF----AEQFYFIGNKSLFIITLAGSFTGMVMAYQ-----TYFGFKLINVDSLVGS 121 Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261 +++I +E+ +L+ +++AGR+G+A+ A+IG+MK+ E++DA+ MG+D + L PRI Sbjct: 122 VVAISLAKELAPVLSGLIVAGRAGAAMAAQIGTMKVTEQVDALEVMGIDSYQYLAVPRIL 181 Query: 262 ALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMA 321 A +SLP+L+I+ F +G+ IV I ++ S+ + +I G+IKA Sbjct: 182 AATLSLPMLSIVFLFVGNVGSYIVGTVALLIDETMYLSKLGDFMFVGDIVQGIIKATVFG 241 Query: 322 CAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 I ++ GF V + +GK VV + V+++D Sbjct: 242 FVIAVIGTYFGFNVTKGAEGVGKGTNLAVVWGMISVLVLD 281 >gi|167765445|ref|ZP_02437558.1| hypothetical protein BACSTE_03835 [Bacteroides stercoris ATCC 43183] gi|167697073|gb|EDS13652.1| hypothetical protein BACSTE_03835 [Bacteroides stercoris ATCC 43183] Length = 247 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 67/235 (28%), Positives = 119/235 (50%), Gaps = 25/235 (10%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G A + + F I ++ +GV+ + +V+LISF GAVI Q + ++ Sbjct: 16 GRVFARPERMRMFFRQYINEIEQLGVNSIGIVLLISFFIGAVITIQIKLNIESPFMPRWT 75 Query: 200 IDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 + ++ REI +L + +++AG+ GS I +E+G+M++ ++IDA+ MG++ Sbjct: 76 VGYVT----REIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGVNSANY 131 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAV---FFSRFHSTAT 306 LI P+I A++ ++PL+ + F+ IIGA W D+ + + F F Sbjct: 132 LILPKIAAMVSTIPLMVTFSIFAGIIGAFCTCWFGGIMSAVDLEYGLQYMFVEWF----- 186 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 I+ G+IK+ F A I V+ G++V S +GK T VV S +++ D Sbjct: 187 ---IWCGIIKSLFFAFIIASVSAFFGYSVEGGSIEVGKASTDSVVCSSVLILFAD 238 >gi|78184152|ref|YP_376587.1| hypothetical protein Syncc9902_0575 [Synechococcus sp. CC9902] gi|78168446|gb|ABB25543.1| Protein of unknown function DUF140 [Synechococcus sp. CC9902] Length = 249 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 63/231 (27%), Positives = 110/231 (47%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G+ ++ + + + L Q+ G + +V +IS G+V Q A +L++ GA Sbjct: 18 GQAVTATMRGRINTVDLSDQLMEAGPGSLLIVFIISVAAGSVFNIQVAAELTRQGAGSTV 77 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 +++I REI LLTA ++AG+ +A A++G+MK+ E+IDAI + D V L+ PR Sbjct: 78 GGILAIGLAREIAPLLTACLLAGKVATAYAAQLGTMKVTEQIDAITMLRTDPVEYLVVPR 137 Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319 + AL++ PL A+ I Y+IP +VF++ + ++ L+KA Sbjct: 138 LIALVVMAPLQCFFFFIVAVWSGQITSTALYNIPPSVFWTSVRTWMHPEDLPFMLVKAVV 197 Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 I ++ G +G T VV + +V I+D + F Sbjct: 198 FGLIIATISCGWGLTTKGGPKEVGTSTTGAVVMILILVCIMDVVLTQVLFG 248 >gi|299137710|ref|ZP_07030891.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX8] gi|298600351|gb|EFI56508.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX8] Length = 256 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 58/224 (25%), Positives = 107/224 (47%), Gaps = 4/224 (1%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G+ ++F F RQ+ G + ++++ F GAV+ L FGA Sbjct: 23 GDSLRPPFEFAQFF----RQVAEAGNKSLILIVVSGFALGAVMTLHTRSTLVMFGATAMI 78 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 + ++ EIG L+ +++AGR GS I A + +M+ E+IDAI ++ +D + L+ PR Sbjct: 79 PAVQAVAFFVEIGPLVAGLLLAGRVGSGIGAVLANMRATEQIDAIESLSIDSFKFLVVPR 138 Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319 + A ++ LP+LT+ +F+ ++G + I ++ +R +N +K Sbjct: 139 VLACVVVLPILTLFMDFAGLLGGFLSEGLTSHIGPTLYVNRAFDYIQWSNFIAPTLKTTV 198 Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 IG V+ G+ + +G+ T VV S ++I+ D L Sbjct: 199 FGFIIGSVSSYFGYTTDKGAKGVGEAATNSVVLSSLLIIVADVL 242 >gi|329942978|ref|ZP_08291752.1| hypothetical protein G5Q_0652 [Chlamydophila psittaci Cal10] gi|313848135|emb|CBY17136.1| putative permease component of ABC transporter [Chlamydophila psittaci RD1] gi|325506979|gb|ADZ18617.1| putative permease component of ABC transporter [Chlamydophila psittaci 6BC] gi|328814525|gb|EGF84515.1| hypothetical protein G5Q_0652 [Chlamydophila psittaci Cal10] gi|328914810|gb|AEB55643.1| ABC transporter, permease protein, putative [Chlamydophila psittaci 6BC] Length = 261 Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 66/228 (28%), Positives = 114/228 (50%), Gaps = 3/228 (1%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 S+K K S+ Q Y +GV+ +PVV+L VTG V+A Q +QL G +I + Sbjct: 35 SWK-KSLFRSISIQGYDIGVASLPVVMLTGAVTGIVLALQSYYQLGIHGLSC-AIGFFVV 92 Query: 206 LQ-LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264 L EIG +LTA+ ++GR G AI A +G+M++ E++ A+ T+G++ + PRI A I Sbjct: 93 KSILVEIGPVLTALALSGRVGGAISAFLGTMRMTEQVSAMETLGVNPLEYFALPRIIAGI 152 Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI 324 +++P L I A +S I ++ + + V+ L++I ++K+ I Sbjct: 153 MAMPALVIAAVWSGIFCGYLLCRYAFQLSAQVYLHMVSGNVFLSDIVMVIVKSLVFGFII 212 Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 +A +G + K T VV S ++ + + F+ +G Sbjct: 213 TSLACYQGLGKHCRITDVAKVTTAGVVTSYISILFANCVITAFFHVLG 260 >gi|282860201|ref|ZP_06269275.1| conserved hypothetical protein [Prevotella bivia JCVIHMP010] gi|282587022|gb|EFB92253.1| conserved hypothetical protein [Prevotella bivia JCVIHMP010] Length = 248 Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 63/215 (29%), Positives = 108/215 (50%), Gaps = 1/215 (0%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSIL 206 + + FL S IR+M +GV + +V+LISF GAVI Q + S + S + + Sbjct: 26 RIRMFLKSYIREMSQLGVDSIGIVLLISFFIGAVICIQIRLNVQSPWMPHWVSGYVTREI 85 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 L E + ++++G+ GS I +E+G+M++ ++IDA+ MG++ LI P+I L+ Sbjct: 86 MLLEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALEIMGINSASYLILPKILGLVTI 145 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326 +P L I + + ++GA + + I + ++ +IK+ F A I Sbjct: 146 MPFLVIFSAATGMLGAYATAYIGHIISPSDLTDGVQHQFNQWFMWMSIIKSLFFAFIIAS 205 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 VA G+ V S +GK T VV S +V+ D Sbjct: 206 VAAYMGYTVKGGSQEVGKASTDAVVTSSVLVLFSD 240 >gi|329957353|ref|ZP_08297873.1| hypothetical protein HMPREF9445_02751 [Bacteroides clarus YIT 12056] gi|328523066|gb|EGF50169.1| hypothetical protein HMPREF9445_02751 [Bacteroides clarus YIT 12056] Length = 247 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 69/243 (28%), Positives = 121/243 (49%), Gaps = 25/243 (10%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G I G A + + F I ++ +GV+ + +V+LISF GAVI Q + Sbjct: 8 VGRYIMLMGRVFARPERMRMFFRQYINEIEQLGVNSIGIVLLISFFIGAVITIQIKLNIE 67 Query: 192 QFGAEIFSIDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 +++ ++ REI +L + +++AG+ GS I +E+G+M++ ++IDA+ Sbjct: 68 SPFMPRWTVGYVT----REIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEI 123 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAV---FF 298 MG++ LI P+I A++ ++PL+ + F+ IIGA W D+ + + F Sbjct: 124 MGVNSANYLILPKIAAMVSTIPLMVTFSIFAGIIGAFCTCWFGGIMSAVDLEYGLQYMFV 183 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 F I+ G+IK+ F A I V+ G+ V S +GK T VV S +++ Sbjct: 184 EWF--------IWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLIL 235 Query: 359 IID 361 D Sbjct: 236 FAD 238 >gi|302767312|ref|XP_002967076.1| hypothetical protein SELMODRAFT_169002 [Selaginella moellendorffii] gi|300165067|gb|EFJ31675.1| hypothetical protein SELMODRAFT_169002 [Selaginella moellendorffii] Length = 342 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 58/214 (27%), Positives = 111/214 (51%), Gaps = 2/214 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 ++Q+ VG + V +L + G V Q + ++ G ++++ RE+ ++T Sbjct: 118 VQQLEAVGPGSLGVNLLTASFVGMVFTIQFVREFAKLGLTRSVGGVLALALARELSPVVT 177 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV++AGR GSA AE+G+M+++E+ D +R +G D V LI+PR+ A +++P LT++ F Sbjct: 178 AVILAGRVGSAFAAELGTMQVSEQTDTLRVLGTDPVDYLITPRVLACCLAMPFLTLMC-F 236 Query: 277 SAIIGASIVIWK-YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 S + AS+++ Y + + +I + +IK+ I IV+ G Sbjct: 237 SVGMAASVLLADSVYRVSANIILDSAARALQPWDIVSTMIKSFVFGGIISIVSCAWGVTT 296 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+ T+ VV S+ + I D + + +F Sbjct: 297 LGGAKGVGESTTSAVVISLVCIFIADFILSWCFF 330 >gi|57238787|ref|YP_179923.1| hypothetical protein Erum0570 [Ehrlichia ruminantium str. Welgevonden] gi|58578712|ref|YP_196924.1| hypothetical protein ERWE_CDS_00480 [Ehrlichia ruminantium str. Welgevonden] gi|58616774|ref|YP_195973.1| hypothetical protein ERGA_CDS_00470 [Ehrlichia ruminantium str. Gardel] gi|57160866|emb|CAH57768.1| putative integral membrane protein [Ehrlichia ruminantium str. Welgevonden] gi|58416386|emb|CAI27499.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel] gi|58417338|emb|CAI26542.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Welgevonden] Length = 265 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 57/201 (28%), Positives = 103/201 (51%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P+V + + TGAV+ Q A ++ + F ++ + +RE+G +L ++IAGR G++ Sbjct: 64 LPIVGVTAIFTGAVLILQNALIINTNVSNDFIAGVVVVAIVRELGPVLIGLIIAGRVGAS 123 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I AEIG+M+I E+IDA+ T+ + + L+ PR+ A +IS+P+L + A+ G IV Sbjct: 124 IAAEIGTMRITEQIDALFTLNTNPFKYLVVPRVIAAMISMPILILCADLIGSYGGYIVGS 183 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 ++ ++ GLIKA I + G+ + +G T Sbjct: 184 FQLGCTPEIYIRGVMKFLHTRDVVLGLIKATVFGFIISFMGCYNGYYCSGGARGVGIATT 243 Query: 348 TCVVQSISIVIIIDSLFAIFY 368 VV S ++I ++ + +FY Sbjct: 244 YVVVISSMLIIFLNYIVTVFY 264 >gi|224069577|ref|XP_002303003.1| ABC transporter family protein [Populus trichocarpa] gi|222844729|gb|EEE82276.1| ABC transporter family protein [Populus trichocarpa] Length = 258 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 58/212 (27%), Positives = 107/212 (50%), Gaps = 2/212 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 ++Q+ VG V V +L S G Q + ++ G ++++ RE+ ++T Sbjct: 38 LQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSIGGVLALAFSRELSPVVT 97 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 ++++AGR GSA AE+G+M+++E+ID +R +G D V L+ PR+ A ++LP LT++ Sbjct: 98 SIVVAGRIGSAFAAELGTMQVSEQIDTLRVLGADPVDYLVIPRVIASCLALPFLTLMCFT 157 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + + ++ Y I + +I + +IK+ I IV+ G Sbjct: 158 VGMASSGLLADSVYGISLNIILDSAQRALNSWDIISAMIKSGVFGAIISIVSCAWGVTTM 217 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + +G+ T+ VV IS+V I + FA+ Y Sbjct: 218 GGAKGVGESTTSAVV--ISLVGIFMADFALSY 247 >gi|218128442|ref|ZP_03457246.1| hypothetical protein BACEGG_00010 [Bacteroides eggerthii DSM 20697] gi|317475731|ref|ZP_07934990.1| hypothetical protein HMPREF1016_01972 [Bacteroides eggerthii 1_2_48FAA] gi|217989333|gb|EEC55646.1| hypothetical protein BACEGG_00010 [Bacteroides eggerthii DSM 20697] gi|316908114|gb|EFV29809.1| hypothetical protein HMPREF1016_01972 [Bacteroides eggerthii 1_2_48FAA] Length = 247 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 67/235 (28%), Positives = 118/235 (50%), Gaps = 25/235 (10%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G A + + F I ++ +GV+ + +V+LISF GAVI Q + ++ Sbjct: 16 GRVFARPERMRMFFRQYINEIEQLGVNSIGIVLLISFFIGAVITIQIKLNIESPFMPRWT 75 Query: 200 IDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 + ++ REI +L + +++AG+ GS I +E+G+M++ ++IDA+ MG++ Sbjct: 76 VGYVT----REIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGVNSANY 131 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAV---FFSRFHSTAT 306 LI P+I A++ ++PL+ + F+ IIGA W D+ + + F F Sbjct: 132 LILPKIAAMVSTIPLMVTFSIFAGIIGAFCTCWFGGIMSAVDLEYGLQYMFVEWF----- 186 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 I+ G+IK+ F A I V+ G+ V S +GK T VV S +++ D Sbjct: 187 ---IWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLILFAD 238 >gi|302755016|ref|XP_002960932.1| ATP-binding cassette transporter, subfamily I, member 10, SmABCI10 [Selaginella moellendorffii] gi|300171871|gb|EFJ38471.1| ATP-binding cassette transporter, subfamily I, member 10, SmABCI10 [Selaginella moellendorffii] Length = 342 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 58/214 (27%), Positives = 111/214 (51%), Gaps = 2/214 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 ++Q+ VG + V +L + G V Q + ++ G ++++ RE+ ++T Sbjct: 118 VQQLEAVGPGSLGVNLLTASFVGMVFTIQFVREFAKLGLTRSVGGVLALALARELSPVVT 177 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV++AGR GSA AE+G+M+++E+ D +R +G D V LI+PR+ A +++P LT++ F Sbjct: 178 AVILAGRVGSAFAAELGTMQVSEQTDTLRVLGTDPVDYLITPRVLACCLAMPFLTLMC-F 236 Query: 277 SAIIGASIVIWK-YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 S + AS+++ Y + + +I + +IK+ I IV+ G Sbjct: 237 SVGMAASVLLADSVYRVSANIILDSAARALQPWDIVSTMIKSFVFGGIISIVSCAWGVTT 296 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+ T+ VV S+ + I D + + +F Sbjct: 297 LGGAKGVGESTTSAVVISLVCIFIADFILSWCFF 330 >gi|111018970|ref|YP_701942.1| ABC transporter permease [Rhodococcus jostii RHA1] gi|226361065|ref|YP_002778843.1| YrbE family protein [Rhodococcus opacus B4] gi|110818500|gb|ABG93784.1| possible ABC transport system, permease component [Rhodococcus jostii RHA1] gi|226239550|dbj|BAH49898.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 264 Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 68/256 (26%), Positives = 130/256 (50%), Gaps = 19/256 (7%) Query: 118 IVKFINDSCSQA-HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 +++ +N + +QA +I+ L + ++F+ F I Q +++ + +++ Sbjct: 8 VLRPVNGALTQAGNIVELFVDVARNTFKRPFQFREF----IEQAWFIASVTILPTAMVAI 63 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 GAV++ Q + Q GAE F+ + +++ L+TA+++AG +GSA+ A++G+ Sbjct: 64 PFGAVVSLQTGSLIKQLGAESFTGAASVLAVIQQGSPLVTALLVAGAAGSAVTADLGART 123 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI--VIWKYYDIPF 294 I EEIDA+ +G++ ++ L+ PR+ A+++ LL L + I G VI + + P Sbjct: 124 IREEIDAMEVLGINPIQRLVVPRVLAMVLVAILLNGLVSVVGIAGGYFFNVILQGGN-PG 182 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 A + + F + A L +I+ G +KA G++A +G H K V V QS+ Sbjct: 183 A-YLASFSAFAQLPDIWVGELKAAVFGVIAGVIAAYKGL----HPKGGPKGVGDAVNQSV 237 Query: 355 SIVIIIDSLFAIFYFA 370 I F + +FA Sbjct: 238 VIT------FLLLFFA 247 >gi|29832444|ref|NP_827078.1| ABC transporter integral membrane protein [Streptomyces avermitilis MA-4680] gi|29609563|dbj|BAC73613.1| putative ABC transporter permease protein [Streptomyces avermitilis MA-4680] Length = 256 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 61/215 (28%), Positives = 104/215 (48%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I+Q ++V + L+S GAVIA Q Q GA+ FS + LRE ++T Sbjct: 37 IQQAWFVASVTILPTALVSIPFGAVIALQIGSLTRQLGAQSFSGAASVLAVLREASPIVT 96 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++IAG G+AI A++G+ KI EEIDA++ +G+D + L+ PR+ A ++ LL L + Sbjct: 97 ALLIAGAGGTAICADLGARKIREEIDAMQVLGIDPIHRLVVPRVLASMVVAVLLNGLVSV 156 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + G + + + F + A L++++ KA IVA +G Sbjct: 157 VGVAGGYFFNVVLQNGTPGAYLASFTTLAQLSDLWAAEAKALVFGAIAAIVASYKGLTAK 216 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +G V VV + ++ + + + YF + Sbjct: 217 GGPKGVGDAVNQSVVITFMLLFVTNFVMTAVYFQV 251 >gi|77463016|ref|YP_352520.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gi|126461890|ref|YP_001043004.1| hypothetical protein Rsph17029_1122 [Rhodobacter sphaeroides ATCC 17029] gi|77387434|gb|ABA78619.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gi|126103554|gb|ABN76232.1| protein of unknown function DUF140 [Rhodobacter sphaeroides ATCC 17029] Length = 260 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 55/214 (25%), Positives = 106/214 (49%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+ + +G +PVV L + TG +A Q ++F AE +++I RE+G +L Sbjct: 45 LLTALIQIGWLSLPVVGLTAIFTGGALALQIYAGGARFSAEAVVPSIVAIGMTRELGPVL 104 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 +M+A R S+I AEIG+MK+ E+IDA+ T+ + ++ L PR+ A +++P+L + + Sbjct: 105 GGLMVAARVASSIAAEIGTMKVTEQIDALVTLSTNPLKYLAVPRVLAATLAVPILVAVGD 164 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I G +V D A + + ++ +GL+K + ++ G Sbjct: 165 SIGIAGGWLVGVNRLDFNSATYIKNTTDFLEVWDVGSGLVKGAAFGFIVALMGCYHGMNS 224 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 G + +G+ + VV + +++ + L +F Sbjct: 225 GRGAQGVGRATKSAVVAASVLILAANYLLTEVFF 258 >gi|85703132|ref|ZP_01034236.1| ABC transporter, inner membrane subunit [Roseovarius sp. 217] gi|85672060|gb|EAQ26917.1| ABC transporter, inner membrane subunit [Roseovarius sp. 217] Length = 261 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 62/246 (25%), Positives = 118/246 (47%), Gaps = 8/246 (3%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 IG+ + +N S I + ++ FL +L++ +G +PVV + Sbjct: 11 IGRTV---LNGLASMGRIALFASDTLSHLARPPFYWREFLHALVQ----IGWLSLPVVGM 63 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 + TG +A Q ++F AE +++I RE+G +L +M+A R S+I AEIG Sbjct: 64 TALFTGGALALQIYAGGARFNAETVVPSIVAIGLTRELGPVLGGLMVAARVASSIAAEIG 123 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 +MK+ E+IDA+ T+ + ++ L PR+ A +++P+L + + I+G +V D Sbjct: 124 TMKVTEQIDALTTLSTNPMKYLTLPRVLAATLAVPVLVGVGDVIGIMGGFLVGVGRLDFS 183 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 A + ++ +GLIK + ++ G G + +G+ + VV + Sbjct: 184 AATYLHNTMDFLETWDVVSGLIKGAAFGFIVALMGCYYGMNSGRGAQGVGRATKSAVVAA 243 Query: 354 ISIVII 359 S++I+ Sbjct: 244 -SVLIL 248 >gi|221638873|ref|YP_002525135.1| ABC transporter inner membrane subunit [Rhodobacter sphaeroides KD131] gi|221159654|gb|ACM00634.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides KD131] Length = 260 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 55/214 (25%), Positives = 106/214 (49%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+ + +G +PVV L + TG +A Q ++F AE +++I RE+G +L Sbjct: 45 LLTALIQIGWLSLPVVGLTAIFTGGALALQIYAGGARFSAEAVVPSIVAIGMTRELGPVL 104 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 +M+A R S+I AEIG+MK+ E+IDA+ T+ + ++ L PR+ A +++P+L + + Sbjct: 105 GGLMVAARVASSIAAEIGTMKVTEQIDALVTLSTNPLKYLAVPRVLAATLAVPILVAVGD 164 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I G +V D A + + ++ +GL+K + ++ G Sbjct: 165 SIGIAGGWLVGVNRLDFNSATYIKNTTDFLEVWDVGSGLVKGAAFGFIVALMGCYHGMNS 224 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 G + +G+ + VV + +++ + L +F Sbjct: 225 GRGAQGVGRATKSAVVAASVLILAANYLLTEVFF 258 >gi|254431004|ref|ZP_05044707.1| ABC-type transport system involved in resistance to organic solvents permease component [Cyanobium sp. PCC 7001] gi|197625457|gb|EDY38016.1| ABC-type transport system involved in resistance to organic solvents permease component [Cyanobium sp. PCC 7001] Length = 258 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 58/219 (26%), Positives = 109/219 (49%), Gaps = 8/219 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++++ G +V++ + G V Q +LS+ GA L+++ REI LL Sbjct: 44 LMQELLEAGPGSFLIVVITALAAGTVFNIQVVAELSKQGANAAVGGLLALGLSREIAPLL 103 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL-- 273 TA ++ G+ +A A++G+MK+ E+IDAI + D V+ L+ PR+ A+++ P+ +L Sbjct: 104 TATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTDPVQYLVVPRVLAMVVMAPVQCLLFF 163 Query: 274 --ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 +S + +S++ Y+IP +VF++ + ++ L+KA I ++A Sbjct: 164 GVGIWSGQLSSSLL----YNIPPSVFWTSVRTWMQPEDLPFMLVKALVFGLQIAVIACGW 219 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G +G T VV + V ++D+L F Sbjct: 220 GLTTRGGPKEVGTSTTGAVVMILVTVALMDALLTKVLFG 258 >gi|303236789|ref|ZP_07323368.1| conserved hypothetical protein [Prevotella disiens FB035-09AN] gi|302482957|gb|EFL45973.1| conserved hypothetical protein [Prevotella disiens FB035-09AN] Length = 248 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 67/228 (29%), Positives = 116/228 (50%), Gaps = 22/228 (9%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 +F+ FL +++M +GV + +V+LISF GAVI Q + ++ ++ Sbjct: 26 RFRMFLKQYVKEMSQLGVDSIGIVLLISFFIGAVICIQIKLNVQSPWMPLWVSGYVT--- 82 Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 REI +L + +++AG+ GS I +E+G+M++ ++IDA+ MG++ LI P+I Sbjct: 83 -REIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGINSASYLILPKIAG 141 Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN------IFTGLIK 316 LI +P L I + I+GA Y FA + T+ L + ++ ++K Sbjct: 142 LITIMPFLVIFSAAMGIVGA------YATAYFAHIITPVDLTSGLQHSFNSWFMYMSIMK 195 Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + F A I V+ G+ V S +GK T VV S S++I+ +F Sbjct: 196 SLFFAFIIASVSSYFGYTVKGGSFDVGKSSTDAVVSS-SVLILFSDVF 242 >gi|225677253|ref|ZP_03788238.1| hypothetical protein WUni_007540 [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590703|gb|EEH11945.1| hypothetical protein WUni_007540 [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 187 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/159 (31%), Positives = 88/159 (55%), Gaps = 1/159 (0%) Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261 L++I ++E+G +L ++++ G+ GS++ AEIG+M+I E+ID + T+ ++ + LI+PRI Sbjct: 20 LVTITIIKELGPVLISLIMVGKVGSSVAAEIGTMRITEQIDVLTTLNINPFKYLIAPRIL 79 Query: 262 ALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMA 321 A II P+LT+ A+ I G I ++ ++ + TGLIKA Sbjct: 80 ASIIVFPILTVCADLIGIFGGCITAVFEFNHNLNIYIKHTAQFFNTYDFITGLIKATVFG 139 Query: 322 CAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 I + + G+ + +G T+ VV S SI+II+ Sbjct: 140 AIISVSSCYYGYHCKEGARGVGVATTSTVVLS-SILIIL 177 >gi|171060067|ref|YP_001792416.1| hypothetical protein Lcho_3393 [Leptothrix cholodnii SP-6] gi|170777512|gb|ACB35651.1| protein of unknown function DUF140 [Leptothrix cholodnii SP-6] Length = 259 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/214 (25%), Positives = 113/214 (52%), Gaps = 1/214 (0%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 Q++++G + ++ + G V+ QG + L ++G+ L+++ +RE+G ++TA+ Sbjct: 46 QIHFLGNHSLAIIGVSGLFVGFVLGLQGYYTLQRYGSSEALGLLVALSLVRELGPVVTAL 105 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 + AGR+G+A+ AEIG MK E++ A+ M +D ++ +++PR ++++PLL + + Sbjct: 106 LFAGRAGTALTAEIGLMKSGEQLAAMEMMAVDPIQRVLAPRFIGGMVAMPLLAAVFSAVG 165 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 IIG +V + F+S+ + +I G+IK+ A + +A+ +G+ Sbjct: 166 IIGGWLVGVVMIGVDAGSFWSQMQGGVDVFKDIGNGVIKSVVFALIVTFIALLQGYECQP 225 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 + + T VV S V+ D + F+I Sbjct: 226 TPEGVARATTRTVVVSSLAVLAFDFVLTALMFSI 259 >gi|120401520|ref|YP_951349.1| hypothetical protein Mvan_0498 [Mycobacterium vanbaalenii PYR-1] gi|119954338|gb|ABM11343.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 269 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/196 (25%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P+V+L SF ++ + GA S GA + +++ +IG +T +++AG SA Sbjct: 72 IPLVVLTSFTFNTLLGEFGAADFSGTGAALGAVN--------QIGPFVTVLVVAGAGASA 123 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + A++GS I EE+DA+R +GLD + L+ PR+ A + LL+ + + ++GA + Sbjct: 124 MCADLGSRTIREEVDAMRVLGLDPIHSLVVPRVLATTLVAVLLSSVVTVTGLLGAFLFSV 183 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + F + L ++ L+KA G++A +G V + +G V+ Sbjct: 184 YFQHVTPGSFVASMTLITGLGDVLVSLVKATLFGFVAGLIACYQGLRVQKGAAGVGNAVS 243 Query: 348 TCVVQSISIVIIIDSL 363 VV + ++ +++++ Sbjct: 244 ETVVIAFLLLFVVNAI 259 >gi|148241576|ref|YP_001226733.1| ABC-type transport system, permease component [Synechococcus sp. RCC307] gi|147849886|emb|CAK27380.1| ABC-type transport system, permease component [Synechococcus sp. RCC307] Length = 250 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 62/226 (27%), Positives = 112/226 (49%), Gaps = 8/226 (3%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G+ A++ + + + L + G S VV++I G V Q A +L++ GA Sbjct: 20 GQALAAAARGRVPIGELSENLMEAGPSSFLVVLIIGMAAGTVFNIQVAAELTKQGAGSTV 79 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 ++++ REI LLTA+++ G+ +A A +G+MK+ E+IDAI + D V L+ PR Sbjct: 80 GGILALGLAREIAPLLTAMLLTGKVATAYAASLGTMKVTEQIDAITMLRTDPVEYLVVPR 139 Query: 260 IWALIISLPLLTIL----ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + A+++ P+ +L +S ++ +S++ Y IP VF+S + +++ + L+ Sbjct: 140 VIAMLVMSPVQCLLFFGIGMWSGMLSSSML----YRIPPPVFWSSMRTWMQPSDVPSMLL 195 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 KA I I+A G +G T VV + + I D Sbjct: 196 KATVFGLEIAIIACGWGLTTRGGPKEVGTSTTGAVVMILLTIAITD 241 >gi|108798619|ref|YP_638816.1| hypothetical protein Mmcs_1650 [Mycobacterium sp. MCS] gi|119867717|ref|YP_937669.1| hypothetical protein Mkms_1676 [Mycobacterium sp. KMS] gi|126434218|ref|YP_001069909.1| hypothetical protein Mjls_1625 [Mycobacterium sp. JLS] gi|108769038|gb|ABG07760.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119693806|gb|ABL90879.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] gi|126234018|gb|ABN97418.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 266 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/196 (25%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P+V+L SF ++ + GA S GA + +++ +IG +T +++AG SA Sbjct: 69 IPLVVLTSFTFNTLLGEFGAADFSGTGAALGAVN--------QIGPFVTVLVVAGAGASA 120 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + A++GS I EE+DA+R +GLD + L+ PR+ A + LL+ + + ++GA + Sbjct: 121 MCADLGSRTIREEVDAMRVLGLDPIHSLVVPRVLATTLVAVLLSSVVTVTGLLGAFLFSV 180 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + F + L ++ L+KA G++A +G V + +G V+ Sbjct: 181 YFQHVTPGSFVASMTLITGLGDVLVSLVKATLFGFVAGLIACYQGLRVQKGAAGVGNAVS 240 Query: 348 TCVVQSISIVIIIDSL 363 VV + ++ +++++ Sbjct: 241 ETVVIAFLLLFVVNAI 256 >gi|49072908|gb|AAT51759.1| TrnB1 [Mycobacterium vanbaalenii PYR-1] Length = 269 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/196 (25%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P+V+L SF ++ + GA S GA + +++ +IG +T +++AG SA Sbjct: 72 IPLVVLTSFTFNTLLGEFGAADFSGTGAALGAVN--------QIGPFVTVLVVAGAGASA 123 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + A++GS I EE+DA+R +GLD + L+ PR+ A + LL+ + + ++GA + Sbjct: 124 MCADLGSRTIREEVDAMRVLGLDPIHSLVVPRVLATTLVAVLLSSVVTVTGLLGAFLFSV 183 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + F + L ++ L+KA G++A +G V + +G V+ Sbjct: 184 YFQHVTPGSFVASMTLITGLGDVLVSLVKATLFGFVAGLIACYQGLRVQKGAAGVGNAVS 243 Query: 348 TCVVQSISIVIIIDSL 363 VV + ++ +++++ Sbjct: 244 ETVVIAFLLLFVVNAI 259 >gi|239814162|ref|YP_002943072.1| hypothetical protein Vapar_1155 [Variovorax paradoxus S110] gi|239800739|gb|ACS17806.1| protein of unknown function DUF140 [Variovorax paradoxus S110] Length = 260 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 53/219 (24%), Positives = 114/219 (52%), Gaps = 2/219 (0%) Query: 155 SLIR-QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 L+R Q++++G + ++ + G V+ Q + L ++G+ L+++ +RE+G Sbjct: 42 GLVRDQIHFLGNYSLAIIAVSGLFVGFVLGLQMYYALQRYGSSEALGLLVALSLVRELGP 101 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 ++ A++ GR+G+++ AEIG MK E++ A+ M +D V+ +++PR WA +I++PLL + Sbjct: 102 VVAALLFTGRAGTSLTAEIGLMKAGEQLSAMEMMAVDPVQRILAPRFWAGVITMPLLAAV 161 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEG 332 + I+G +V + F+ + + ++ G+IK+ + +A+ +G Sbjct: 162 FSAVGIMGGYVVGVLMLGVDPGAFWGQMQGGVDVWRDVGNGVIKSIVFGFTVTFIALLQG 221 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 + + + T VV + V+ +D L F+I Sbjct: 222 YEAQPTPEGVSRATTRTVVMASLSVLGLDFLLTAMMFSI 260 >gi|145221253|ref|YP_001131931.1| hypothetical protein Mflv_0654 [Mycobacterium gilvum PYR-GCK] gi|315441852|ref|YP_004074731.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|145213739|gb|ABP43143.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] gi|315260155|gb|ADT96896.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 269 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/196 (25%), Positives = 101/196 (51%), Gaps = 8/196 (4%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P+V+L SF ++ + GA S GA + +++ +IG +T +++AG SA Sbjct: 72 IPLVVLTSFTFNTLLGEFGAADFSGTGAALGAVN--------QIGPFVTVLVVAGAGASA 123 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + A++GS I EE+DA+R +GLD + L+ PR+ A + LL+ + + ++GA + Sbjct: 124 MCADLGSRTIREEVDAMRVLGLDPIHSLVVPRVLATTLVAVLLSSVVTVTGLLGAFLFSV 183 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + F + L ++ L+KA G++A +G V + +G V+ Sbjct: 184 YFQHVTPGSFVASMTLITGLGDVLVSLVKATLFGFVAGLIACYQGLRVQKGAAGVGNAVS 243 Query: 348 TCVVQSISIVIIIDSL 363 VV + ++ +++++ Sbjct: 244 ETVVIAFLLLFVVNAI 259 >gi|300313364|ref|YP_003777456.1| organic solvents resistance ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300076149|gb|ADJ65548.1| ABC-type transport system involved in resistance to organic solvents, permease component protein [Herbaspirillum seropedicae SmR1] Length = 259 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 53/195 (27%), Positives = 110/195 (56%), Gaps = 3/195 (1%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTA 217 Q++++G + ++ + G V+ QG + L+++G+E ++ L+ L L RE+G ++TA Sbjct: 47 QIHFIGNYSLVIIAVSGLFVGFVLGLQGYYTLNKYGSEQ-ALGLLVALSLTRELGPVVTA 105 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++ AGR+G+++ AEIG MK E++ A+ M ++ ++ +++PR WA +I++P+L + + Sbjct: 106 LLFAGRAGTSLTAEIGLMKAGEQLSAMEMMAVNPLQRVVAPRFWAGVIAMPVLAAIFSAV 165 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFAVG 336 +IG +V + F+S+ + N I G++K+ A+ VA+ +G+ Sbjct: 166 GVIGGYVVGVLLIGVDEGAFWSQMQGGVDVWNDIANGVLKSVVFGVAVTFVALFQGYEAK 225 Query: 337 VHSNSLGKKVTTCVV 351 + + T VV Sbjct: 226 PTPEGVARATTRTVV 240 >gi|124514232|gb|EAY55746.1| probable ABC transporter, permease protein [Leptospirillum rubarum] Length = 261 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 48/211 (22%), Positives = 103/211 (48%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + Q+ + G+ +P++ ++SF+ G + +L + G + ++ + LR +G T Sbjct: 46 LNQILFNGLDALPILTVVSFLVGMGTVAEAGIELPKLGVQNLVGPIILHIILRIVGPFTT 105 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A+++ R+ S++ EIG+M+I+ E+D I MG + L++PR++ I+S L++ Sbjct: 106 ALIVTARTASSLTVEIGNMRISGELDTIEMMGANISYFLLAPRLFGAIVSTVALSLYFAV 165 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 A IG ++ + +P ++ L ++ L+++ I V G VG Sbjct: 166 IAFIGGLLIAFFGLSMPIVSLIRALETSINLPDLLIPLVESITYGSIIAAVGSYHGLKVG 225 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + ++ T +V SI + + + F +F Sbjct: 226 DSPTDVPQQTTRALVSSIVLCTLFSTFFLVF 256 >gi|318059765|ref|ZP_07978488.1| ABC-transporter integral membrane protein [Streptomyces sp. SA3_actG] gi|318075809|ref|ZP_07983141.1| ABC-transporter integral membrane protein [Streptomyces sp. SA3_actF] Length = 287 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 63/227 (27%), Positives = 109/227 (48%), Gaps = 6/227 (2%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 ++F+ F I Q +++ + L+S GAVIA Q Q GA+ F+ + Sbjct: 60 PFQFREF----IEQFWFIASVTILPAALVSIPFGAVIALQVGSLTQQLGAQSFTGGASVL 115 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 +++ L+ +++IAG GSAI A++GS KI EE+DA+ MG+ V+ L+ PR+ A + Sbjct: 116 AVIQQASPLIVSLLIAGAGGSAICADLGSRKIREELDAMEVMGVSPVQRLVVPRVLATMF 175 Query: 266 SLPLLTILANFSAIIGASIV-IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI 324 LL L + +G + + + P A + F + A L +++ G +KA Sbjct: 176 VALLLNGLVSVVGTLGGYFLNVGLQHGTPGA-YLQSFSALAQLPDLYVGELKALVFGLIA 234 Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 GIVA G +G V VV + ++++++ Y I Sbjct: 235 GIVAAYRGLNPRGGPKGVGDAVNQSVVITFILLLVVNMAMTAVYLQI 281 >gi|226229261|ref|YP_002763367.1| putative transporter [Gemmatimonas aurantiaca T-27] gi|226092452|dbj|BAH40897.1| putative transporter [Gemmatimonas aurantiaca T-27] Length = 275 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/215 (26%), Positives = 108/215 (50%), Gaps = 14/215 (6%) Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 +GV +P+ I I+ TG V+A ++ + F L+ E+ +LT + +AG Sbjct: 63 LGVDSLPIGIFIALFTGIVLALLASYSVGDLVPPYFVGTLVQKTITLELAPVLTGLALAG 122 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG- 281 R G+ I AE+G+M++ E+IDA+ T+ D + L+ PR+ A + P++ +A ++ Sbjct: 123 RVGANIAAELGTMRVTEQIDALETLTFDPMSHLVVPRVLASALMFPIVVGMAMLVGLLSG 182 Query: 282 --ASIVIWKYYDIPF----AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 ASIV+ F +FF F ++ GL+K+ A+ ++ + G Sbjct: 183 WVASIVLLDIATPQFLKGVRLFFQPF-------DVQYGLVKSASFGAAVALIGCRAGLNT 235 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +G+ T VV S +++++D+ +AI + + Sbjct: 236 LGGAQGVGRSATRAVVISAVMILVLDAFWAIVWLS 270 >gi|159026095|emb|CAO86324.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 288 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/191 (28%), Positives = 93/191 (48%), Gaps = 4/191 (2%) Query: 165 VSGVPVVILISFVTGAVIAQ----QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 V+ P ++I+ +T AVI Q A + GA ++++ RE+ ++ A+++ Sbjct: 68 VAAGPASLIIAMITAAVIGMIFTIQVAREFQALGAGSMVGGILALALGRELCPIMMAIVV 127 Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280 AGR GSA AEIG+MK+ E+IDA+ + D V L+ PR+ A + +P L+I+A + Sbjct: 128 AGRVGSAFAAEIGTMKVTEQIDALYMLKTDPVEYLVLPRLIACCLMVPALSIMALLIGLG 187 Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 +V Y I +VF + ++ +G +K I I+ G + Sbjct: 188 SGLLVGQSLYGIANSVFLDSVRGFLRVGDVLSGPVKGLVFGALIAIIGCNWGLTTDGGAK 247 Query: 341 SLGKKVTTCVV 351 +G+ T VV Sbjct: 248 GVGQATTAAVV 258 >gi|146277114|ref|YP_001167273.1| hypothetical protein Rsph17025_1067 [Rhodobacter sphaeroides ATCC 17025] gi|145555355|gb|ABP69968.1| protein of unknown function DUF140 [Rhodobacter sphaeroides ATCC 17025] Length = 260 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 58/218 (26%), Positives = 109/218 (50%), Gaps = 4/218 (1%) Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211 FL +LI+ +G +PVV L + TG +A Q ++F AE +++I RE+ Sbjct: 45 FLNALIQ----IGWLSLPVVGLTAIFTGGALALQIYAGGARFSAEAVVPSIVAIGMTREL 100 Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271 G +L +M+A R S+I AEIG+MK+ E+IDA+ T+ + ++ L PR+ A +++P+L Sbjct: 101 GPVLGGLMVAARVASSIAAEIGTMKVTEQIDALVTLSTNPLKYLAVPRVLAATLAVPVLV 160 Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 + + I G +V D A + + ++ +GL+K + ++ Sbjct: 161 AVGDSIGIAGGWLVGVNRLDFNSATYIKNTVDFLEVWDVGSGLVKGAAFGFIVALMGCYH 220 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 G G + +G+ + VV + +++ + L +F Sbjct: 221 GMNSGRGAQGVGRATKSAVVAASVLILAANYLLTEVFF 258 >gi|302523371|ref|ZP_07275713.1| ABC-transporter integral membrane protein [Streptomyces sp. SPB78] gi|302432266|gb|EFL04082.1| ABC-transporter integral membrane protein [Streptomyces sp. SPB78] Length = 253 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 63/227 (27%), Positives = 109/227 (48%), Gaps = 6/227 (2%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 ++F+ F I Q +++ + L+S GAVIA Q Q GA+ F+ + Sbjct: 26 PFQFREF----IEQFWFIASVTILPAALVSIPFGAVIALQVGSLTQQLGAQSFTGGASVL 81 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 +++ L+ +++IAG GSAI A++GS KI EE+DA+ MG+ V+ L+ PR+ A + Sbjct: 82 AVIQQASPLIVSLLIAGAGGSAICADLGSRKIREELDAMEVMGVSPVQRLVVPRVLATMF 141 Query: 266 SLPLLTILANFSAIIGASIV-IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI 324 LL L + +G + + + P A + F + A L +++ G +KA Sbjct: 142 VALLLNGLVSVVGTLGGYFLNVGLQHGTPGA-YLQSFSALAQLPDLYVGELKALVFGLIA 200 Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 GIVA G +G V VV + ++++++ Y I Sbjct: 201 GIVAAYRGLNPRGGPKGVGDAVNQSVVITFILLLVVNMAMTAVYLQI 247 >gi|126740431|ref|ZP_01756119.1| membrane protein [Roseobacter sp. SK209-2-6] gi|126718567|gb|EBA15281.1| membrane protein [Roseobacter sp. SK209-2-6] Length = 260 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 64/224 (28%), Positives = 113/224 (50%), Gaps = 23/224 (10%) Query: 145 SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204 Y + LLSL++ VG +PVV L + TG +A Q ++F AE +++ Sbjct: 38 PPYYPREVLLSLLQ----VGWLSLPVVGLTAVFTGGALALQIYAGGARFNAEAVVPQIVA 93 Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264 I +RE+G +L +MIA R S+I AEI +MK+ E+IDA+ T+ + ++ L++PR+ A + Sbjct: 94 IGMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQIDALVTLSTNPMQYLVAPRVLAAL 153 Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN---------IFTGLI 315 +++P+L + + I G V AV+ F+S A L N + + L+ Sbjct: 154 VTVPVLVGVGDIIGIAGGYTV---------AVYNLDFNSAAYLKNTVDFLEPLDLISSLV 204 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 K F + G G + +G+ T V++ +++I+ Sbjct: 205 KGAFFGTIAATMGCYYGMQSGRGAQGVGRA-TKSSVEAAAVLIL 247 >gi|89068948|ref|ZP_01156330.1| membrane protein [Oceanicola granulosus HTCC2516] gi|89045529|gb|EAR51593.1| membrane protein [Oceanicola granulosus HTCC2516] Length = 258 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 61/229 (26%), Positives = 114/229 (49%), Gaps = 18/229 (7%) Query: 156 LIRQMYY----------VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 L+R +Y VG +PVV L +F TG +A Q ++F AE ++++ Sbjct: 33 LVRPPFYAREFGHAVMSVGWQSLPVVGLTAFFTGGALALQIYSGGARFSAEALVPQIVAV 92 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 +RE+G +L +MIA R S+I AEI +MK+ E++DA+ T+ + ++ L PR+ A ++ Sbjct: 93 GMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQLDALVTLSTNPMKYLTLPRVLAALL 152 Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325 ++P+L + + I G +V D A + + ++ + L+K A G Sbjct: 153 TVPVLVAVGDVIGIFGGYLVGIYRLDFNPANYITNTVDFLEAHDVISSLVK----GGAFG 208 Query: 326 IVAMKEGFAVGVHSN----SLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 ++A G G+ S+ +G+ T VV + +++ + L +F+ Sbjct: 209 LIAALTGCYYGMQSDRGAQGVGRATKTAVVVAAVLILAANFLLTEAFFS 257 >gi|157413886|ref|YP_001484752.1| putative transporter, membrane component [Prochlorococcus marinus str. MIT 9215] gi|254526072|ref|ZP_05138124.1| ABC-type transport system involved in resistance to organic solvents permease component [Prochlorococcus marinus str. MIT 9202] gi|157388461|gb|ABV51166.1| possible transporter, membrane component [Prochlorococcus marinus str. MIT 9215] gi|221537496|gb|EEE39949.1| ABC-type transport system involved in resistance to organic solvents permease component [Prochlorococcus marinus str. MIT 9202] Length = 251 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 7/220 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L Q+ G + +V++ G V Q A QL+ G L+++ RE+ LL Sbjct: 34 LFEQLMESGPGSLLIVLITGIAAGTVFNIQVASQLTSMGVSSEIGGLLAVGMAREMAPLL 93 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA ++ G+ +A A++G+MK+ E+I+AI + + V+ L+ PR+ +++I P+ +L Sbjct: 94 TATLMTGKVATAYAAQLGTMKVTEQIEAITMLRTEPVQYLVVPRLLSMVIMSPIQCLL-- 151 Query: 276 FSAIIGASIVIWK--YYDIPFAVFFSRFHS---TATLANIFTGLIKAPFMACAIGIVAMK 330 F ++ S IW +Y +P VF++ S + T A++ + LIK+ I I+A Sbjct: 152 FLSVALWSGQIWSTIFYKVPPIVFWTSVRSGNVSLTSADLTSMLIKSVVFGLLISIIACG 211 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G +G T VV ++ V ++D L F Sbjct: 212 YGLTTKGGPKEVGTSTTGAVVMTLVTVSLMDVLLTQILFG 251 >gi|78779806|ref|YP_397918.1| putative transporter, membrane component [Prochlorococcus marinus str. MIT 9312] gi|78713305|gb|ABB50482.1| Protein of unknown function DUF140 [Prochlorococcus marinus str. MIT 9312] Length = 251 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 7/220 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L Q+ G + +V++ G V Q A QL+ G L+++ RE+ LL Sbjct: 34 LFEQLMESGPGSLLIVLITGIAAGTVFNIQVASQLTSMGVSSEIGGLLAVGMAREMAPLL 93 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA ++ G+ +A A++G+MK+ E+IDAI + + ++ L+ PR+ +++I P+ +L Sbjct: 94 TATLMTGKVATAYAAQLGTMKVTEQIDAITMLRTEPIQYLVVPRLLSMVIMSPIQCLL-- 151 Query: 276 FSAIIGASIVIWK--YYDIPFAVFFSRFHS---TATLANIFTGLIKAPFMACAIGIVAMK 330 F ++ S IW +Y +P VF++ S + T ++ + LIK+ I I+A Sbjct: 152 FLSVALWSGQIWSTIFYKVPPIVFWTSVRSGNVSLTSTDLTSMLIKSVVFGLIISIIACG 211 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G +G T VV ++ V ++D L F Sbjct: 212 YGLTTKGGPKEVGTSTTGAVVMTLVTVSLMDVLLTQILFG 251 >gi|189462219|ref|ZP_03011004.1| hypothetical protein BACCOP_02902 [Bacteroides coprocola DSM 17136] gi|189431072|gb|EDV00057.1| hypothetical protein BACCOP_02902 [Bacteroides coprocola DSM 17136] Length = 246 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 69/242 (28%), Positives = 117/242 (48%), Gaps = 20/242 (8%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + G A +F+ +L +M +G++ + +V+LISF GAVI Q + Sbjct: 8 LGKYLMLMGRVFARPERFRMYLKQYRNEMAQLGINSIGIVLLISFFIGAVICIQIKLNIE 67 Query: 192 QFGAEIFSIDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 F + + REI +L + +++AG+ GS I +EIG+M++ ++IDA+ Sbjct: 68 SPWMPRFVVGYTT----REILLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALDI 123 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAVFFSRF 301 MG++ LI P+I L+ +PLL + F+ +IGA W D+ + F Sbjct: 124 MGVNSASYLILPKILGLMTMIPLLVTFSIFAGVIGAFCTAWFAGITNATDLEYG-----F 178 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + ++ IK+ A I V+ G+ V S ++GK T VV S S++I+ Sbjct: 179 QYSFVEWYVWCSFIKSLVFAFIIASVSAYFGYTVEGGSIAVGKASTDSVVCS-SVLILFS 237 Query: 362 SL 363 L Sbjct: 238 DL 239 >gi|313886966|ref|ZP_07820667.1| conserved hypothetical protein [Porphyromonas asaccharolytica PR426713P-I] gi|312923573|gb|EFR34381.1| conserved hypothetical protein [Porphyromonas asaccharolytica PR426713P-I] Length = 251 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 62/227 (27%), Positives = 115/227 (50%), Gaps = 9/227 (3%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 K+ F LIR+M G+ + +V++ISF G VI Q + +S F+I Sbjct: 28 KWGIFFKQLIREMAKYGLDSIWIVVIISFFIGTVITIQLSINMSSPLIPRFTIGYAG--- 84 Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 REI L + +++AG+ GS+I +E+ +M++ E+IDA+ MG++ LI P+I Sbjct: 85 -REIMFLEFSSSIMCLILAGKVGSSIASELATMRVTEQIDAMEIMGVNSANFLILPKILG 143 Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322 L++ +P+L++++ + ++G + + I + F + + NIF +IK+ A Sbjct: 144 LMLFIPVLSVISMATGLVGGYLATFFIPSITPSDFEMGLQTFFVVKNIFYSIIKSLVYAF 203 Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 I A G+ V + +G+ T VV S ++++ D + F Sbjct: 204 IISSGASYFGYTVKGGALGVGRASTNAVVSSCVLILLADVMLTSLLF 250 >gi|166365969|ref|YP_001658242.1| hypothetical protein MAE_32280 [Microcystis aeruginosa NIES-843] gi|166088342|dbj|BAG03050.1| hypothetical protein MAE_32280 [Microcystis aeruginosa NIES-843] Length = 268 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 4/191 (2%) Query: 165 VSGVPVVILISFVTGAVIAQ----QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 V+ P ++I+ +T AVI Q A + GA ++++ RE+ ++ A+++ Sbjct: 48 VAAGPASLIIAMITAAVIGMIFTIQVAREFQALGAGSMVGGILALALGRELCPIMMAIVV 107 Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280 AGR GSA AEIG+MK+ E+IDA+ + D V L+ PR+ A + +P L+++A + Sbjct: 108 AGRVGSAFAAEIGTMKVTEQIDALYMLKTDPVEYLVLPRLIACCLMVPALSVMALLIGLG 167 Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 +V Y I +VF + ++ +G +K I I+ G + Sbjct: 168 SGLLVGQSLYGIANSVFLDSVRGFLGVGDVLSGPVKGVVFGALIAIIGCNWGLTTDGGAK 227 Query: 341 SLGKKVTTCVV 351 +G+ T VV Sbjct: 228 GVGQATTAAVV 238 >gi|154494356|ref|ZP_02033676.1| hypothetical protein PARMER_03711 [Parabacteroides merdae ATCC 43184] gi|154085800|gb|EDN84845.1| hypothetical protein PARMER_03711 [Parabacteroides merdae ATCC 43184] Length = 248 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 65/245 (26%), Positives = 125/245 (51%), Gaps = 24/245 (9%) Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 H +G + G+ + ++ F LI+++Y +GV + +V++IS G VIA Q + Sbjct: 6 HQVGEYVMLMGKCISVPNRWSMFFKQLIKEIYKLGVDSLWIVVIISIFIGTVIAIQISLN 65 Query: 190 LSQFGAEIFSIDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 +S F+I + REI +L + ++++AG+ GS I +EIG+M++ E+IDA+ Sbjct: 66 ISSPLIPKFTIGYTT----REIILLEFSSSIMSLILAGKVGSNIASEIGTMRVTEQIDAM 121 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG--------ASIVIWKYYDIPFAV 296 MG++ LI P++ ++ +P+L I + F+ I+G + + ++ Sbjct: 122 EIMGVNSANFLILPKMVGMMTFIPVLVIFSMFTGILGGIAASHSTGTGMTPASFEYGLQF 181 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +F+ F+ I+ +IK+ A I +A G+ V + +GK T VV S + Sbjct: 182 YFNEFY-------IWYSIIKSVVYAFIISSIAAYFGYNVKGGALEVGKASTNAVVMSSIM 234 Query: 357 VIIID 361 +++ D Sbjct: 235 ILLAD 239 >gi|332177068|gb|AEE12758.1| protein of unknown function DUF140 [Porphyromonas asaccharolytica DSM 20707] Length = 251 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 61/219 (27%), Positives = 113/219 (51%), Gaps = 9/219 (4%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 K+ F LIR+M G+ + +V++ISF G VI Q + +S F+I Sbjct: 28 KWGIFFKQLIREMAKYGLDSIWIVVIISFFIGTVITIQLSINMSSPLIPRFTIGYAG--- 84 Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 REI L + +++AG+ GS+I +E+ +M++ E+IDA+ MG++ LI P+I Sbjct: 85 -REIMFLEFSSSIMCLILAGKVGSSIASELATMRVTEQIDAMEIMGVNSANFLILPKILG 143 Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322 L++ +P+L++++ + ++G + + I + F + + NIF +IK+ A Sbjct: 144 LMLFIPVLSVISMATGLVGGYLATFFIPSITPSDFEMGLQTFFVVKNIFYSIIKSLVYAF 203 Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 I A G+ V + +G+ T VV S ++++ D Sbjct: 204 IISSGASYFGYTVKGGALGVGRASTNAVVSSCVLILLAD 242 >gi|206602875|gb|EDZ39356.1| Probable ABC transporter, permease protein [Leptospirillum sp. Group II '5-way CG'] Length = 261 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 47/211 (22%), Positives = 104/211 (49%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + Q+ + G+ +P++ ++SF+ G + +L + G + ++ + LR +G T Sbjct: 46 LNQILFNGLDALPILTVVSFLVGMGTVAEAGIELPKLGVQNLVGPIILHIILRIVGPFTT 105 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A+++ R+ S++ EIG+M+I+ E+D I MG + L++PR++ I+S L++ Sbjct: 106 ALIVTARTASSLTVEIGNMRISGELDTIEMMGANISYFLLAPRLFGAIVSTVALSLYFAV 165 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 A +G ++ + +P ++ L+++ L+++ I V G VG Sbjct: 166 IAFLGGLLIAFFGLSMPIVSLIRALETSINLSDLLIPLVESITYGSIIAAVGSYHGLKVG 225 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + ++ T +V SI + + + F +F Sbjct: 226 DSPADVPQQTTRALVSSIVLCTLFSTFFLVF 256 >gi|282880876|ref|ZP_06289569.1| conserved hypothetical protein [Prevotella timonensis CRIS 5C-B1] gi|281305258|gb|EFA97325.1| conserved hypothetical protein [Prevotella timonensis CRIS 5C-B1] Length = 250 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 66/229 (28%), Positives = 113/229 (49%), Gaps = 30/229 (13%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 + + F I++M +GV +P+V+LISF GAVI Q + ++ ++ Sbjct: 29 RMRMFFKQYIKEMTKLGVDSIPLVLLISFFIGAVICIQMKINVQSPWMPRWTTGYVT--- 85 Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 REI +L +++AG+ GS I +E+G+M++ ++IDA+ MG++ LI P+I Sbjct: 86 -REILLLEFSSAFMCLILAGKIGSNIASELGTMRVTQQIDALDIMGVNPACYLILPKIMG 144 Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN----------IFT 312 LI +P L I ++ + +IGA +A +S S A L I+ Sbjct: 145 LITIMPFLVIFSSVAGMIGA-----------YATAYSGVLSPADLTTGLQYSFKVWFIWM 193 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 +IK+ A I V+ GF+V + ++G+ T VV S +V+ D Sbjct: 194 SIIKSLVFAFIIASVSSYYGFSVEGGAVAVGEASTNAVVSSSVLVLFAD 242 >gi|124022277|ref|YP_001016584.1| transporter membrane component [Prochlorococcus marinus str. MIT 9303] gi|123962563|gb|ABM77319.1| possible transporter, membrane component [Prochlorococcus marinus str. MIT 9303] Length = 248 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 59/231 (25%), Positives = 110/231 (47%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G+ A++ + + + L Q+ G +V++ G V Q A +LS+ GA Sbjct: 18 GQAVAATARGRINKVDLFDQLMEAGPGSFLIVLITGLAAGTVFNIQVAAELSRQGAGSTV 77 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 +++I REI LLTA ++ G+ +A A++G+MK+ E+IDAI + + V L+ PR Sbjct: 78 GGILAIGMAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTEPVEYLVVPR 137 Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319 + A+++ P+ +L A+ + Y IP VF++ + T ++ L+K+ Sbjct: 138 VIAMVVMAPVQCMLFFGIALWSGQVSSTNLYQIPPEVFWNSVRTWLTPDDMPFMLVKSLV 197 Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 I +++ G +G T VV ++ V ++D L F+ Sbjct: 198 FGLQIAVLSCGWGLTTRGGPKEVGTSTTGAVVMTLVTVSLMDVLLTQILFS 248 >gi|288803886|ref|ZP_06409311.1| ABC transporter, permease [Prevotella melaninogenica D18] gi|302345895|ref|YP_003814248.1| hypothetical protein HMPREF0659_A6184 [Prevotella melaninogenica ATCC 25845] gi|288333651|gb|EFC72101.1| ABC transporter, permease [Prevotella melaninogenica D18] gi|302149082|gb|ADK95344.1| conserved hypothetical protein [Prevotella melaninogenica ATCC 25845] Length = 248 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 68/224 (30%), Positives = 111/224 (49%), Gaps = 14/224 (6%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSIL 206 + + FL +++M +GV + +V+LISF GAVI Q + S + S + + Sbjct: 26 RMRMFLKRYVKEMSQLGVDSIGIVLLISFFIGAVICIQIKLNVQSPWMPHWVSGYVTREI 85 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 L E + ++++G+ GS I +E+G+M++ ++IDA+ MG++ LI P+I LI Sbjct: 86 MLLEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALEIMGINSASYLILPKIMGLITI 145 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT------GLIKAPFM 320 +P L I + + IIGA Y A + TA L + F +IK F Sbjct: 146 MPFLVIFSAATGIIGA------YATAYLAHIITPVDLTAGLQHDFNPWFMWMSIIKGFFF 199 Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A I V+ G+ V S +GK T VV S S++I+ +F Sbjct: 200 AFIISSVSSYMGYTVKGGSVEVGKASTDAVVCS-SVLILFSDVF 242 >gi|307564910|ref|ZP_07627431.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A] gi|307346383|gb|EFN91699.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A] Length = 248 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 62/218 (28%), Positives = 111/218 (50%), Gaps = 2/218 (0%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSIL 206 + + F S +R+M +GV+ + +V+LISF GAVI Q + S + S + + Sbjct: 26 RMRMFFKSYVREMSQLGVNSIGIVLLISFFIGAVICIQIRLNVQSPWMPHWVSGYVTREI 85 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 L E + ++++G+ GS I +E+GSM++ ++IDA+ MG++ LI P+I L+ Sbjct: 86 MLLEFSSSIMCLILSGKVGSNIASELGSMRVTQQIDALEIMGINSASYLILPKILGLMTL 145 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326 +P L I + ++GA + + I A ++ ++K F A I Sbjct: 146 MPFLVIFSAAIGMVGAYSTAYIGHVISPADLTEGVQHHFNQWFMWMSILKGFFFAFIISS 205 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 V+ G++V S +GK T VV+S S++I+ +F Sbjct: 206 VSSYMGYSVKGGSQEVGKASTDAVVKS-SVLILFSDVF 242 >gi|83816537|ref|YP_446599.1| hypothetical protein SRU_2501 [Salinibacter ruber DSM 13855] gi|294508531|ref|YP_003572590.1| Conserved hypothetical protein, membrane, containing DUF140 domain [Salinibacter ruber M8] gi|83757931|gb|ABC46044.1| domain of unknown function superfamily [Salinibacter ruber DSM 13855] gi|294344860|emb|CBH25638.1| Conserved hypothetical protein, membrane, containing DUF140 domain [Salinibacter ruber M8] Length = 250 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 49/149 (32%), Positives = 85/149 (57%), Gaps = 1/149 (0%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 S LG + G AS K + +L QM VG+ +P+V L + TGAV Q Sbjct: 7 SPFRALGRYATLMGRAFASIDKVGTYWNNLFIQMVRVGIDSIPIVALAAAFTGAVFTVQT 66 Query: 187 AFQL-SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A+QL + F + +++ + E+G ++ ++AGR G+ I AE+G+M+++E+IDA+ Sbjct: 67 AYQLETPFIPKTIIGSIVAPSIMLELGAVIAGFILAGRVGARIAAELGTMRVSEQIDALE 126 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILA 274 MGL+ V L+ PR+ A ++ P+L +++ Sbjct: 127 VMGLNSVGFLVLPRVLAGVLMFPVLYVVS 155 >gi|262195117|ref|YP_003266326.1| hypothetical protein Hoch_1886 [Haliangium ochraceum DSM 14365] gi|262078464|gb|ACY14433.1| protein of unknown function DUF140 [Haliangium ochraceum DSM 14365] Length = 328 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 52/200 (26%), Positives = 95/200 (47%) Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221 Y+G +P+++L+ TGAV+A Q F FG E + E+ +L A+M+ Sbjct: 110 YIGFGSLPIILLVGLFTGAVMALQSVFAFRDFGLESMVGGVTGKALATELAPVLAALMLT 169 Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281 GR+ + I E+G+M+I+E+IDA+ +M ++ ++ L+ PR+ A P+LT++ + G Sbjct: 170 GRAAAGIATELGTMRISEQIDALESMAVNPIQFLVLPRLVAGFFMAPILTLIFFVIGMGG 229 Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341 A V + F ++ G++K+ + ++ +GF Sbjct: 230 AYFVSVISEGVDHGQFVHNTKDILNFVDVLQGILKSAVFGFVVVLIGCYQGFFASGGGRG 289 Query: 342 LGKKVTTCVVQSISIVIIID 361 +G T VV V+I D Sbjct: 290 VGLGTTRAVVIGSVTVLITD 309 >gi|206889329|ref|YP_002249685.1| ABC transporter permease protein [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741267|gb|ACI20324.1| ABC transporter permease protein [Thermodesulfovibrio yellowstonii DSM 11347] Length = 223 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 54/205 (26%), Positives = 102/205 (49%), Gaps = 1/205 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 +RQ+Y+ G+ VP V + + G +I Q A ++ G+ ++ L L+EIG T Sbjct: 9 LRQIYFTGIQAVPAVTISGLLIGLIIVLQTA-SIAGTGSSNMIGKILLWLVLKEIGPFFT 67 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 ++I RSGSAI E+ +MK+ EI+ + MG+ LI PR++ ++ S +L+I Sbjct: 68 GLIILTRSGSAIATELATMKLGREIEYLEAMGIKPEVYLIKPRLYGVVCSAVILSIYFQL 127 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 +A+ G + IPF+ + + ++ I +K+ I ++ + +G +V Sbjct: 128 TAMFGGVFLATLMSGIPFSDYANAIVFHLSIKEIVISFLKSLIFGFLISLICIWQGLSVM 187 Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361 + ++ T V S+ + +ID Sbjct: 188 KSPTEIPQRATKAVTGSLFSLFLID 212 >gi|224025978|ref|ZP_03644344.1| hypothetical protein BACCOPRO_02729 [Bacteroides coprophilus DSM 18228] gi|224019214|gb|EEF77212.1| hypothetical protein BACCOPRO_02729 [Bacteroides coprophilus DSM 18228] Length = 247 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 65/226 (28%), Positives = 109/226 (48%), Gaps = 19/226 (8%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + G A + + + I +M +G++ + +V+LISF GAVI Q + Sbjct: 8 LGKYLMLMGRVFARPERIRMYFKQYINEMVQLGINSIGIVLLISFFIGAVICIQIKLNIE 67 Query: 192 QFGAEIFSIDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 F + + REI +L + +++AG+ GS I +EIG+M++ ++IDA+ Sbjct: 68 SPWMPRFVVGYTT----REILLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALEI 123 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAVFFSRF 301 MG++ LI P+I L+ +PLL I + F+ IIGA W D+ + + + Sbjct: 124 MGINSASYLILPKILGLMTIIPLLVIFSIFAGIIGAFCTAWFAGIMNATDLEYGLQYCFI 183 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 I+ IK+ F A I V+ G+ V S ++GK T Sbjct: 184 E-----WYIWCSFIKSLFFAFIIASVSAYFGYTVEGGSIAVGKAST 224 >gi|260590590|ref|ZP_05856048.1| ABC transporter, permease [Prevotella veroralis F0319] gi|260537463|gb|EEX20080.1| ABC transporter, permease [Prevotella veroralis F0319] Length = 248 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 72/254 (28%), Positives = 123/254 (48%), Gaps = 21/254 (8%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I+K++N + ++G +S + + F +++M +GV + +V+LISF Sbjct: 3 IIKWLNTFGNYLMLMGRSLSR-------PERMRMFFKRYLKEMSQLGVDSIGIVLLISFF 55 Query: 178 TGAVIAQQGAFQL-SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 GAVI Q + S + S + + L E + ++++G+ GS I +E+G+M+ Sbjct: 56 IGAVICIQIKLNVQSAWMPHWVSGYVTREIMLLEFSSSIMCLILSGKVGSNIASELGTMR 115 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 + ++IDA+ MG++ LI P+I L+ +P L I + + IIGA Y FA Sbjct: 116 VTQQIDALEIMGINSASYLILPKILGLMTIMPFLVIFSAATGIIGA------YATAYFAH 169 Query: 297 FFSRFHSTATLANIFT------GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 + TA L + F +IK F A I V+ G+ V S +GK T V Sbjct: 170 IITPVDLTAGLQHDFNPWFMWMSIIKGFFFAFIISSVSSYMGYTVKGGSVEVGKASTDAV 229 Query: 351 VQSISIVIIIDSLF 364 V S S++I+ +F Sbjct: 230 VCS-SVLILFSDVF 242 >gi|262202881|ref|YP_003274089.1| hypothetical protein Gbro_2988 [Gordonia bronchialis DSM 43247] gi|262086228|gb|ACY22196.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247] Length = 285 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 61/215 (28%), Positives = 109/215 (50%), Gaps = 6/215 (2%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 IRQ ++ + V +L++ G +++ Q + Q GA FS + +R+ L+T Sbjct: 65 IRQCAFMSSTSVFPTLLVAIPIGVIVSIQVSNIAGQIGATSFSGAATGLGVIRQGAPLVT 124 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPLLTILAN 275 ++++AG GSAI A++GS I +EIDA+R MG++ ++ LISPR+ A +++S L + Sbjct: 125 SLLLAGAVGSAIAADLGSRTIRDEIDAMRVMGVNPIQRLISPRLLATMVVSFLLCGFVCF 184 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I G + ++ P + F S A+ +++ L KA + +VA G + Sbjct: 185 VGFITGYAFNVYFQGGTP-GSYTGTFASFASTSDLLFALGKAVIFGAIVAVVACDRGLST 243 Query: 336 GVHSNSLGKKVTTCVVQSI----SIVIIIDSLFAI 366 + V VV S+ ++ +I+ LFAI Sbjct: 244 KGGPAGVANSVNAAVVNSVLLLFTVNVILTQLFAI 278 >gi|121603597|ref|YP_980926.1| hypothetical protein Pnap_0686 [Polaromonas naphthalenivorans CJ2] gi|120592566|gb|ABM36005.1| protein of unknown function DUF140 [Polaromonas naphthalenivorans CJ2] Length = 260 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 58/218 (26%), Positives = 111/218 (50%), Gaps = 8/218 (3%) Query: 148 KFKGFLLSLIR-QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206 FK F L+R Q++++G + ++ + G V QG + L +FG+ L++ Sbjct: 37 SFKRF--GLVRDQIHFLGNYSLVIIAISGLFVGFVFGLQGYYTLLRFGSTEALGQLVTFT 94 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 +RE+G ++TA++ AGR+G+++ AEIG MK E+I + M +D ++ +++PR W +I+ Sbjct: 95 LVRELGPVVTALLFAGRAGTSLTAEIGLMKAGEQISVMEMMAVDPIQRILAPRFWGGVIT 154 Query: 267 LPLLTILANFSAIIGASIVIWK--YYDIPFAVFFSRFH-STATLANIFTGLIKAPFMACA 323 +PLL A FSA+ + + F+S+ S ++ G++K+ Sbjct: 155 MPLLA--AVFSAMGVIGGWVVGVLMLGVDSGSFWSQIQGSVDVWRDVGNGIVKSIVFGFT 212 Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + +A+ +GF + T VV + V+ +D Sbjct: 213 VTFIALLQGFEAQPTPEGVASATTRTVVVASLAVLALD 250 >gi|255693535|ref|ZP_05417210.1| ABC transporter, permease [Bacteroides finegoldii DSM 17565] gi|260620673|gb|EEX43544.1| ABC transporter, permease [Bacteroides finegoldii DSM 17565] Length = 247 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 63/226 (27%), Positives = 117/226 (51%), Gaps = 23/226 (10%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 + + F + ++ +GV+ + +V+LISF GAVI Q + +++ ++ Sbjct: 24 RMRMFFRQYLNELEQLGVNSIGIVLLISFFIGAVITIQIKLNIESPWMPRWTVGYVT--- 80 Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 REI +L + +++AG+ GS I +E+G+M++ ++IDA+ MG++ LI P+I A Sbjct: 81 -REIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGVNSANYLILPKITA 139 Query: 263 LIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAV--FFSRFHSTATLANIFTGLI 315 ++ +P+L + F+ IIGA W D+ + + F+ + I+ G+I Sbjct: 140 MVTVIPILVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQYMFNEWF-------IWAGII 192 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 K+ F A I V+ G+ V S ++GK T VV S +++ D Sbjct: 193 KSLFFAFIIASVSAFFGYTVDGGSIAVGKASTDSVVSSSVLILFAD 238 >gi|149913819|ref|ZP_01902351.1| ABC transporter, inner membrane subunit [Roseobacter sp. AzwK-3b] gi|149812103|gb|EDM71934.1| ABC transporter, inner membrane subunit [Roseobacter sp. AzwK-3b] Length = 261 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 51/203 (25%), Positives = 100/203 (49%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +PVV + + TG +A Q ++F AE +++I RE+G +L +M+A R S+ Sbjct: 58 LPVVGMTALFTGGALALQIYAGGARFNAETVVPSIVAIGLTRELGPVLGGLMVAARVASS 117 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I AEIG+MK+ E+IDA+ T+ + ++ L PR+ A +++PLL + + I+G +V Sbjct: 118 IAAEIGTMKVTEQIDALTTLSTNPMKYLTLPRVLAATLAVPLLVGVGDVIGIMGGFLVGV 177 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 D + ++ +G+IK + ++ G G + +G+ Sbjct: 178 GRLDFGAGTYLHNTLDFLETWDVVSGMIKGAVFGFIVALMGCYYGMNSGRGAQGVGRATK 237 Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370 VV + +++ + + +F+ Sbjct: 238 AAVVAASVLILASNYILTELFFS 260 >gi|254392558|ref|ZP_05007736.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] gi|197706223|gb|EDY52035.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] Length = 255 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 64/247 (25%), Positives = 110/247 (44%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 S + H G + T E S ++ L I Q ++V + L+S GAVIA Sbjct: 3 SLASLHETGRFFALTAEIVRSVFRRPFQLREFIEQFWFVASVTILPAALVSIPFGAVIAL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q GA+ F+ + +++ L+ A++IAG GSAI A++GS KI EE+DA+ Sbjct: 63 QVGSLTQQLGAQSFTGGASVLAVIQQASPLIVALLIAGAGGSAICADLGSRKIREELDAM 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ ++ L+ PR+ A ++ LL + + +G D + + F + Sbjct: 123 EVMGVSPIQRLVVPRVLATMLVAFLLNGMISVVGTLGGYFFNVIMQDGTPGAYLASFSAL 182 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A L +++ KA G+VA G +G V VV + ++ ++ + Sbjct: 183 AQLPDLYISEFKALVFGFIAGVVAAHRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMII 242 Query: 365 AIFYFAI 371 Y + Sbjct: 243 TAIYLQV 249 >gi|258647414|ref|ZP_05734883.1| ABC transporter, permease [Prevotella tannerae ATCC 51259] gi|260852782|gb|EEX72651.1| ABC transporter, permease [Prevotella tannerae ATCC 51259] Length = 248 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 2/218 (0%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSIL 206 +++ F +++M +GV + +V+LISF GAVI Q + S + S + + Sbjct: 26 RWRMFGKQYLKEMAQLGVDSIGIVLLISFFIGAVICIQIKLNIQSAWMPTWVSGYVTREI 85 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 L E + ++++G+ GS I +E+G+M+ ++IDA+ MG++ LI P+I L+ Sbjct: 86 MLLEFSSSIMCLILSGKVGSNIASELGTMRTTQQIDALEIMGVNSASFLILPKILGLVTM 145 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326 +PLL I + S I+GA + + I + + G IK+ F A I Sbjct: 146 IPLLVIFSTASGIVGAYATAYIGHIITATDLTAGMQHDFAPWFFWMGTIKSLFFAFIIAS 205 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 V+ G+ V S +GK T VV S S++I+ LF Sbjct: 206 VSSFYGYTVEGGSIEVGKASTNAVV-SCSMLILFSDLF 242 >gi|312888399|ref|ZP_07747975.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM 18603] gi|311299233|gb|EFQ76326.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM 18603] Length = 243 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 58/215 (26%), Positives = 110/215 (51%), Gaps = 1/215 (0%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSIL 206 KF + ++R+M +G+ + ++ +IS GAV Q AFQL S F + + Sbjct: 21 KFSVYWAEVMREMVSIGLGSLGIISIISVFIGAVATIQTAFQLVSDFIPKTIVGTITRDS 80 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 + E ++A+++AGR GS+I ++IG+M++ E+IDA+ MG++ LISP+I + ++ Sbjct: 81 TILEFSPTISALVLAGRVGSSIASQIGTMRVTEQIDALEIMGVNAPGYLISPKIISGVLM 140 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326 +PLLT+++ ++G I ++ A + + + ++KA F I Sbjct: 141 IPLLTVISISLGLLGGYIACAASSEVSTADYITGLTDGFKTIILQVSMVKATFFGFIITS 200 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + +GF + +G+ T VV S ++ D Sbjct: 201 ICAYQGFYTSGGALEVGQSATRGVVFSCIFILFAD 235 >gi|159044922|ref|YP_001533716.1| hypothetical protein Dshi_2379 [Dinoroseobacter shibae DFL 12] gi|157912682|gb|ABV94115.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12] Length = 258 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 7/186 (3%) Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 +G +PVV L +F TG +A Q ++F AE +++I +RE+G +L +MIA Sbjct: 50 IGYFSLPVVGLTAFFTGGALALQIYAGGARFSAEAVVPQIVAIGMVRELGPVLGGLMIAA 109 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 R S+I AEI +MK+ E+IDA+ T+ ++ L +PR+ A I+ +PLL + + I+G Sbjct: 110 RVTSSIAAEIATMKVTEQIDALVTLSTHPMKYLTAPRVLAAILVVPLLVAVGDTIGIMGG 169 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK-------APFMACAIGIVAMKEGFAV 335 +V A + L +I + L K A M C G+ + + V Sbjct: 170 YLVSTSRLGFNPATYLQNTVDFLELHDIVSSLAKGAVFGAIAALMGCYSGMNSGRGAQGV 229 Query: 336 GVHSNS 341 G + S Sbjct: 230 GAATKS 235 >gi|150003041|ref|YP_001297785.1| hypothetical protein BVU_0448 [Bacteroides vulgatus ATCC 8482] gi|254883679|ref|ZP_05256389.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|294775665|ref|ZP_06741173.1| putative membrane protein [Bacteroides vulgatus PC510] gi|149931465|gb|ABR38163.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] gi|254836472|gb|EET16781.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|294450509|gb|EFG19001.1| putative membrane protein [Bacteroides vulgatus PC510] Length = 255 Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 70/234 (29%), Positives = 115/234 (49%), Gaps = 20/234 (8%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G A + F + +M +GV+ + +V+LISF GAVI Q + F Sbjct: 24 GRTFARPERMHMFFKQYLNEMVQLGVNSIGIVLLISFFIGAVITIQIKLNIESPWMPRFV 83 Query: 200 IDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 + + REI +L + ++++G+ GS I +EIG+M++ ++IDA+ MG++ Sbjct: 84 VGYTT----REIMLLEFSSSIMCLILSGKVGSNIASEIGTMRVTQQIDALEIMGVNSAGY 139 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAVFFSRFHSTATLAN 309 LI P+I AL+ +P L I + S IIGA W D+ + + +S F Sbjct: 140 LILPKIIALMTMIPFLVIFSISSGIIGAFCTCWFGGVMNAEDLAYGLQYS-FQEWF---- 194 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 ++ IK+ F A I V+ G+ V S ++GK T VV S S++I+ L Sbjct: 195 VWCSFIKSIFFAFIISSVSAYFGYTVEGGSIAVGKASTDSVVMS-SVLILFSDL 247 >gi|237757027|ref|ZP_04585479.1| ABC-type transport system involved in resistance to organic solvents, permease component [Sulfurihydrogenibium yellowstonense SS-5] gi|237690807|gb|EEP59963.1| ABC-type transport system involved in resistance to organic solvents, permease component [Sulfurihydrogenibium yellowstonense SS-5] Length = 137 Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 44/128 (34%), Positives = 73/128 (57%), Gaps = 6/128 (4%) Query: 135 VISNTGE----FCASSYKFKGF--LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +I +TG F + FK F + +++ M +GV+ P+++L F TG V+ + Sbjct: 7 LIEHTGNITIFFLRTLLSFKKFPKIKHILKYMEDIGVNAAPLIVLTGFFTGGVLVVETYP 66 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 +F AE L+S+ RE+ +L A+++ RSGSAI A IG+M+I E+IDA+ M Sbjct: 67 TFHKFNAEFLMGALVSLSLARELSPVLVALLVTARSGSAIAANIGTMRITEQIDALEVMA 126 Query: 249 LDFVRILI 256 +D +R L+ Sbjct: 127 VDPMRYLV 134 >gi|319642184|ref|ZP_07996844.1| hypothetical protein HMPREF9011_02444 [Bacteroides sp. 3_1_40A] gi|317386170|gb|EFV67089.1| hypothetical protein HMPREF9011_02444 [Bacteroides sp. 3_1_40A] Length = 251 Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 70/234 (29%), Positives = 115/234 (49%), Gaps = 20/234 (8%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G A + F + +M +GV+ + +V+LISF GAVI Q + F Sbjct: 20 GRTFARPERMHMFFKQYLNEMVQLGVNSIGIVLLISFFIGAVITIQIKLNIESPWMPRFV 79 Query: 200 IDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 + + REI +L + ++++G+ GS I +EIG+M++ ++IDA+ MG++ Sbjct: 80 VGYTT----REIMLLEFSSSIMCLILSGKVGSNIASEIGTMRVTQQIDALEIMGVNSAGY 135 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAVFFSRFHSTATLAN 309 LI P+I AL+ +P L I + S IIGA W D+ + + +S F Sbjct: 136 LILPKIIALMTMIPFLVIFSISSGIIGAFCTCWFGGVMNAEDLAYGLQYS-FQEWF---- 190 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 ++ IK+ F A I V+ G+ V S ++GK T VV S S++I+ L Sbjct: 191 VWCSFIKSIFFAFIISSVSAYFGYTVEGGSIAVGKASTDSVVMS-SVLILFSDL 243 >gi|326382581|ref|ZP_08204272.1| hypothetical protein SCNU_06565 [Gordonia neofelifaecis NRRL B-59395] gi|326198700|gb|EGD55883.1| hypothetical protein SCNU_06565 [Gordonia neofelifaecis NRRL B-59395] Length = 281 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/215 (27%), Positives = 108/215 (50%), Gaps = 6/215 (2%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 IRQ ++ + V +L++ G +++ Q + Q GA FS + +R+ L+T Sbjct: 61 IRQCAFMASTSVFPTLLVAIPIGVIVSIQVSNIAGQIGATSFSGAATGLGVIRQGAPLVT 120 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPLLTILAN 275 ++++AG GSAI A++GS I EEIDA+R MG++ ++ LISPR+ A +++S L + Sbjct: 121 SLLLAGAVGSAIAADLGSRTIREEIDAMRVMGVNPIQRLISPRLLATMVVSFLLCGFVCF 180 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I G ++ P + F S A + ++ L+KA + IVA G + Sbjct: 181 VGFITGYLFNVYFQGGTP-GSYTGTFASFAGVPDLLFALVKAVIFGAIVAIVACDRGLST 239 Query: 336 GVHSNSLGKKVTTCVVQSI----SIVIIIDSLFAI 366 + V VV S+ ++ +++ +FA+ Sbjct: 240 SGGPAGVANSVNAAVVNSVILLFTVNVVLTQVFAL 274 >gi|239931478|ref|ZP_04688431.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis ATCC 14672] gi|291439854|ref|ZP_06579244.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis ATCC 14672] gi|291342749|gb|EFE69705.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis ATCC 14672] Length = 254 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 66/227 (29%), Positives = 108/227 (47%), Gaps = 6/227 (2%) Query: 146 SYKFKGFLLSLIRQMYYV-GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204 ++F+ F + Q ++V GV+ +P L+S GAVIA Q Q GA+ F+ Sbjct: 27 PFQFREF----VEQFWFVAGVTILPAA-LVSIPFGAVIALQVGSLTQQLGAQSFTGGASV 81 Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264 + +++ L+ A++IAG GSAI A++GS KI EE+DA+ MG+ V+ L+ PR+ A + Sbjct: 82 LAVVQQASPLIVALLIAGAGGSAICADLGSRKIREELDAMEVMGVSPVQRLVVPRVLATM 141 Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI 324 LL L + +G D + S F + A A+++ +KA Sbjct: 142 GVAVLLNGLVSVVGTLGGYFFNVVLQDGTPGAYLSSFSALAQPADLYISELKALVFGFIA 201 Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 GIVA G +G V VV + ++ ++ + Y I Sbjct: 202 GIVAAYRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMVMTALYLQI 248 >gi|153809065|ref|ZP_01961733.1| hypothetical protein BACCAC_03373 [Bacteroides caccae ATCC 43185] gi|149128398|gb|EDM19617.1| hypothetical protein BACCAC_03373 [Bacteroides caccae ATCC 43185] Length = 247 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 63/226 (27%), Positives = 117/226 (51%), Gaps = 23/226 (10%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 + + F + ++ +GV+ + +V+LISF GAVI Q + +++ ++ Sbjct: 24 RMRMFFRQYLNELEQLGVNSIGIVLLISFFIGAVITIQIKLNIESPWMPRWTVGYVT--- 80 Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 REI +L + +++AG+ GS I +E+G+M++ ++IDA+ MG++ LI P+I A Sbjct: 81 -REIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGVNSANYLILPKIAA 139 Query: 263 LIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAV--FFSRFHSTATLANIFTGLI 315 ++ +P+L + F+ IIGA W D+ + + F+ + I+ G+I Sbjct: 140 MVTVIPILVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQYMFNEWF-------IWAGII 192 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 K+ F A I V+ G+ V S ++GK T VV S +++ D Sbjct: 193 KSLFFAFIIASVSAFFGYTVEGGSIAVGKASTDSVVSSSVLILFAD 238 >gi|149278644|ref|ZP_01884780.1| ABC transporter, permease [Pedobacter sp. BAL39] gi|149230639|gb|EDM36022.1| ABC transporter, permease [Pedobacter sp. BAL39] Length = 244 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/136 (37%), Positives = 88/136 (64%), Gaps = 5/136 (3%) Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAE--IFSIDLMSILQL 208 ++ ++ +QM ++GV + ++ +IS GAV+ Q AFQL S F + I S++ S + Sbjct: 26 YMKAIFKQMDFIGVGSLGLIAIISTFIGAVMTLQIAFQLVSDFIPKTIIGSVNRDS--SI 83 Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268 E+ ++A+++AG+ GSAI +EIG+M+++E+IDA+ MG++ LI P+I A I +P Sbjct: 84 LELSPTISAIVLAGKIGSAISSEIGTMRVSEQIDALEIMGINSPGYLILPKIIAGITMVP 143 Query: 269 LLTILANFSAIIGASI 284 LL I++ F +I G I Sbjct: 144 LLVIMSMFLSITGGYI 159 >gi|282895910|ref|ZP_06303950.1| Putative uncharacterized protein [Raphidiopsis brookii D9] gi|281199155|gb|EFA74024.1| Putative uncharacterized protein [Raphidiopsis brookii D9] Length = 238 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 1/208 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + Q+ VG + + +L + GAV Q A + FGA ++++ RE+ +LT Sbjct: 16 VEQLAVVGPDSLFIALLTAIFVGAVFTIQVAREFINFGAGNLVGGVLAVALTRELSPVLT 75 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV++AGR GSA AEIG+M++ E+IDA+ + D + + L I+ + Sbjct: 76 AVILAGRVGSAFAAEIGTMRVTEQIDALLMLKTDPIDFFSHTSSFGLFINATNFDLAIPG 135 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 +G I+ Y++ VF + L +I + +IKA I I+ G Sbjct: 136 YWNVGRLIIATNLYNLSDTVFLDSARNFLDLRDIISAMIKAACFGILIAIIGCSWGLTTT 195 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + +G+ TT VV ++ +VI I + F Sbjct: 196 GGAKGVGQSTTTAVVTAL-LVIFISNFF 222 >gi|256380617|ref|YP_003104277.1| hypothetical protein Amir_6634 [Actinosynnema mirum DSM 43827] gi|255924920|gb|ACU40431.1| protein of unknown function DUF140 [Actinosynnema mirum DSM 43827] Length = 260 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 65/222 (29%), Positives = 112/222 (50%), Gaps = 6/222 (2%) Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYY-VGVSGVPVVILISFVTGAVIAQQGAFQLS 191 G + + G+ A+S++ + ++Q ++ V V+ +P L+S GAVIA Q Sbjct: 16 GRLFALAGQVVAASFRRPFQVREFVQQCWFLVSVTVLPTA-LVSIPFGAVIALQLGSLTR 74 Query: 192 QFGAEIFS--IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 Q GA+ F+ +++I+Q + ++TA++IAG GSAI A++GS I EEIDA+ +G+ Sbjct: 75 QIGAQSFTGAASVLAIIQ--QASPIVTALLIAGAGGSAICADLGSRTIREEIDAMEVLGV 132 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 V L+ PR+ A ++ LL + + ++G D + + F + A L++ Sbjct: 133 SPVHRLVVPRVLAAMVVAVLLNGMVSVVGVMGGYFFNVVLQDGTPGAYLASFSALAQLSD 192 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 ++ G +KA GIVA G +G V VV Sbjct: 193 LWIGELKALVFGFIAGIVAAYRGLNPAGGPKGVGDAVNQAVV 234 >gi|229496605|ref|ZP_04390319.1| conserved hypothetical protein [Porphyromonas endodontalis ATCC 35406] gi|229316502|gb|EEN82421.1| conserved hypothetical protein [Porphyromonas endodontalis ATCC 35406] Length = 256 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 63/232 (27%), Positives = 120/232 (51%), Gaps = 27/232 (11%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 ++ F L+R++ +G+ + +V++ISF G VI Q A +S F+I + Sbjct: 33 RWSMFFKQLVREIAKIGLDSILIVMIISFFIGTVITIQLAINISSPMIPRFTIGYST--- 89 Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 REI +L + +++AG+ GS+I +E+G+M++ E+IDA+ MG++ LI P+I Sbjct: 90 -REIVLLEFSSSIMCLILAGKIGSSIASELGTMRVTEQIDALEVMGINSANFLILPKIIG 148 Query: 263 LIISLPLLTILANFSAIIGASIVIW-------KYYDIPFAVFFSRFHSTATLANIFTGLI 315 L++ +P+L+I++ +AI G + W + ++ ++F+ + N+ +I Sbjct: 149 LLLFIPVLSIISMATAIGGGFLATWLTPSLTAEDFEYGMQLYFNPY-------NVLYSVI 201 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKV--TTCVVQSISIVIIIDSLFA 365 K+ + A I + F V +LG V T VV S ++++ D L Sbjct: 202 KS--LVYAFIITSGSSYFGYNVKGGALGVGVASTNAVVTSSVLILLADVLLT 251 >gi|91070487|gb|ABE11396.1| putative transporter, membrane component [uncultured Prochlorococcus marinus clone HOT0M-1A11] Length = 251 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 7/220 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L Q+ G + +V++ G V Q A QL+ G L+++ RE+ LL Sbjct: 34 LFDQLMESGPGSLLIVLITGIAAGTVFNIQVASQLTSMGVSSEIGGLLAVGMAREMAPLL 93 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA ++ G+ +A A++G+MK+ E+I+AI + + V+ L+ PR+ +++I P+ +L Sbjct: 94 TATLMTGKVATAYAAQLGTMKVTEQIEAITMLRTEPVQYLVVPRLLSMVIMSPIQCLL-- 151 Query: 276 FSAIIGASIVIWK--YYDIPFAVFFSRFHS---TATLANIFTGLIKAPFMACAIGIVAMK 330 F ++ S IW +Y +P VF++ S + T ++ + LIK+ I I+A Sbjct: 152 FLSVALWSGQIWSTIFYKVPPIVFWTSVRSGNVSLTSTDLTSMLIKSVVFGLIISIIACG 211 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G +G T VV ++ V ++D L F Sbjct: 212 YGLTTKGGPKEVGTSTTGAVVMTLVTVSLMDVLLTQILFG 251 >gi|302560790|ref|ZP_07313132.1| YrbE family protein [Streptomyces griseoflavus Tu4000] gi|302478408|gb|EFL41501.1| YrbE family protein [Streptomyces griseoflavus Tu4000] Length = 254 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 66/227 (29%), Positives = 109/227 (48%), Gaps = 6/227 (2%) Query: 146 SYKFKGFLLSLIRQMYYV-GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204 ++F+ F I Q +++ GV+ +P L+S GAVIA Q Q GA+ F+ Sbjct: 27 PFQFREF----IEQFWFIAGVTILPAA-LVSIPFGAVIALQVGSLTQQLGAQSFTGGASV 81 Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264 + +++ L+ A++IAG GSAI A++GS KI EE+DA+ MG+ V+ L+ PR+ A + Sbjct: 82 LAVVQQASPLIVALLIAGAGGSAICADLGSRKIREELDAMEVMGVSPVQRLVVPRVLATM 141 Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI 324 LL L + +G D + S F + A L++++ +KA Sbjct: 142 GVAVLLNGLVSVVGTLGGYFFNVVMQDGTPGAYLSSFSALAQLSDLYISELKALVFGFIA 201 Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 GIVA G +G V VV + ++ ++ + Y I Sbjct: 202 GIVAAYRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMVMTGIYLQI 248 >gi|281421763|ref|ZP_06252762.1| ABC transporter, permease [Prevotella copri DSM 18205] gi|281404258|gb|EFB34938.1| ABC transporter, permease [Prevotella copri DSM 18205] Length = 248 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 63/218 (28%), Positives = 110/218 (50%), Gaps = 2/218 (0%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSIL 206 + + FL I++M +G+ + +V+LISF GAVI Q + S + S + Sbjct: 26 RMRMFLKQYIKEMSQLGIDSIGIVLLISFFIGAVICIQMKLNIQSPWMPRWVSGYTTREI 85 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 L E + +++AG+ GS I +E+G+M++ ++IDA+ MG++ LI P+I L+ Sbjct: 86 MLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALDIMGVNSACYLILPKILGLVTI 145 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326 +P L I ++ IIGA + + +P + ++ +IK+ F A I Sbjct: 146 MPFLVIFSSGMGIIGAYGTAYIGHILPPDDLTLGLQHSFNQWFVWMSIIKSLFFAFIISS 205 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 V+ G+ V S +GK T VV S S++I+ +F Sbjct: 206 VSSYFGYTVEGGSVEVGKSSTDAVVCS-SVLILFSDVF 242 >gi|198276177|ref|ZP_03208708.1| hypothetical protein BACPLE_02366 [Bacteroides plebeius DSM 17135] gi|198270989|gb|EDY95259.1| hypothetical protein BACPLE_02366 [Bacteroides plebeius DSM 17135] Length = 247 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 62/226 (27%), Positives = 109/226 (48%), Gaps = 19/226 (8%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + G + +F+ + + +M +G++ + +V+LISF GAVI Q + Sbjct: 8 LGKYLMLMGRVFSRPERFRMYFKQYLNEMVQLGINSIGIVLLISFFIGAVICIQIKLNIE 67 Query: 192 QFGAEIFSIDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 F + + REI +L + +++AG+ GS I +EIG+M++ ++IDA+ Sbjct: 68 SPWMPRFVVGYTT----REILLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALEI 123 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAVFFSRF 301 MG++ LI P+I L+ +P L I + F+ +IGA W D+ + + + Sbjct: 124 MGVNSASYLILPKILGLMTMIPFLVIFSIFAGVIGAFCTAWFAGIMNATDLEYGLQYCFV 183 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 I+ IK+ F A I V+ G+ V S ++GK T Sbjct: 184 E-----WYIWCSFIKSLFFAFIIASVSAYFGYTVEGGSIAVGKAST 224 >gi|88658302|ref|YP_506914.1| hypothetical protein ECH_0084 [Ehrlichia chaffeensis str. Arkansas] gi|88599759|gb|ABD45228.1| conserved hypothetical protein [Ehrlichia chaffeensis str. Arkansas] Length = 275 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 56/206 (27%), Positives = 105/206 (50%), Gaps = 10/206 (4%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P+V + + TGAV+ Q + + + F ++ + +RE+G +L ++IAGR G+A Sbjct: 74 LPIVGITAIFTGAVLILQNSLIIHNNVSGDFVSGVVVVAIVRELGPVLIGLIIAGRVGAA 133 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I AEIG+M+I E+IDA+ T+ + + L+ PRI + ++++P+L + A+ G IV Sbjct: 134 IAAEIGTMRITEQIDALFTLDTNPFKYLVVPRIISAMVAMPILILCADLIGAYGGYIV-- 191 Query: 288 KYYDIPFAVFFSRFHSTATL-----ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 Y + + S + + ++ GL+KA I + G+ + + Sbjct: 192 GSYQLGYT---SEMYIKGVIKFLHAKDVALGLVKATVFGFIISFMGCYSGYYCSGGARGV 248 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFY 368 G T VV S +I+ + + +FY Sbjct: 249 GLATTYVVVVSSMFIILFNYIITVFY 274 >gi|118469389|ref|YP_885535.1| ABC transporter transmembrane protein [Mycobacterium smegmatis str. MC2 155] gi|118170676|gb|ABK71572.1| ABC-transporter integral membrane protein [Mycobacterium smegmatis str. MC2 155] Length = 289 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 57/212 (26%), Positives = 102/212 (48%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 IRQ ++ + V +L++ G ++ Q A Q GA + + +R+ L Sbjct: 69 IRQGAFMASTAVVPTVLVALPIGVTLSIQFALLAGQVGATSLAGAASGLAVIRQAASLTA 128 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV++A GSAI A++GS K+ EE DA+ MG+ ++ L+ PR A I+ LT + F Sbjct: 129 AVLMAAAVGSAITADLGSRKMREETDAMEVMGVSVIKRLVVPRFAAAIMIGVALTGVVCF 188 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 I + + + D F + F S AT ++ LIKA + +V+ ++G + Sbjct: 189 VGFIASFLFNVYFQDGAPGSFVATFASFATTGDMIVALIKAVIFGAIVAVVSCQKGLSTV 248 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + V VV+SI ++++++ + Y Sbjct: 249 GGPTGVANSVNAAVVESILLLMVVNVAISQLY 280 >gi|288801493|ref|ZP_06406945.1| ABC transporter, permease [Prevotella sp. oral taxon 299 str. F0039] gi|288331574|gb|EFC70060.1| ABC transporter, permease [Prevotella sp. oral taxon 299 str. F0039] Length = 248 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 69/239 (28%), Positives = 119/239 (49%), Gaps = 12/239 (5%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG I G + + + F I++M +GV + +V+LISF GAVI Q + Sbjct: 10 LGEYIMLMGRSFSRPERMRMFFKRYIKEMSSLGVDSIGIVLLISFFIGAVICIQMKLNIQ 69 Query: 192 QFGAEIFSIDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 + +S REI +L + ++++G+ GS I +E+G+M++ ++IDA+ Sbjct: 70 ----SPWMPRWVSGYTTREILILEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALDI 125 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI-PFAVFFSRFHSTA 305 MG++ LI P+I L+ +P L I ++ + I+GA + + + P + HS Sbjct: 126 MGINSASYLIMPKILGLVTIMPFLVIFSSVTGILGAYATAYIGHILSPEDLTLGLQHSFN 185 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++ +IK+ F A I V+ G+ V S +GK T VV S SI+I+ +F Sbjct: 186 PWF-VWMSIIKSLFFAFIIASVSSYYGYTVQGGSVEVGKSSTDAVVSS-SILILFSDVF 242 >gi|152990804|ref|YP_001356526.1| ABC transporter, permease [Nitratiruptor sp. SB155-2] gi|151422665|dbj|BAF70169.1| ABC transporter, permease [Nitratiruptor sp. SB155-2] Length = 263 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/205 (29%), Positives = 104/205 (50%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 ++QM +GV + V+ L + TG V A Q +FGAE F + + +E+G + Sbjct: 47 LQQMDIIGVGSLFVISLTAIFTGLVEAIQLYHGFHKFGAEEFMGYTIFVSISKELGPVFG 106 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A+M+ R+ SA+ AE+G+M++ E+IDAI T+ +D + LI PR+ A +S P+L I+ F Sbjct: 107 ALMLVSRAVSAMTAELGTMRVTEQIDAIDTLAVDSKKYLIVPRVIAATLSTPILVIVFVF 166 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 I A ++ + + + + ++I TG+IKA I I+ G+ Sbjct: 167 LGNIAAYLISVYALGVNPNSYKNTITTYLEFSDIGTGIIKAFVFGYLISIIGTYIGYFTR 226 Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361 + +G T VV + V + + Sbjct: 227 GGARGVGLSTTKSVVYAAMTVFVAN 251 >gi|33861880|ref|NP_893441.1| putative transporter, membrane component [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33640248|emb|CAE19783.1| possible transporter, membrane component [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 251 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 62/234 (26%), Positives = 116/234 (49%), Gaps = 9/234 (3%) Query: 144 ASSYKFKGFLL--SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSID 201 A +Y F+G + L Q+ G + +V++ G V Q A QL+ G Sbjct: 20 AINYIFRGKISKNDLFEQLMESGPGSLVIVLITGIAAGTVFNIQVASQLTSMGVSSEIGG 79 Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261 L+++ RE+ LLTA ++ G+ +A A++G+MK+ E+I+AI + + ++ L+ PR+ Sbjct: 80 LLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTEQIEAITMLRTEPIQYLVVPRLL 139 Query: 262 ALIISLPLLTILANFSAIIGASIVIWK--YYDIPFAVFFSRFHS---TATLANIFTGLIK 316 ++II P+ +L F ++ S IW +Y++P VF++ S + T +++ + +IK Sbjct: 140 SMIIMSPIQCLL--FLSVALWSGQIWSTIFYNVPPIVFWTSVRSGNVSLTSSDLSSMIIK 197 Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + I I+A G +G T VV ++ V ++D + F Sbjct: 198 SVVFGLLISIIACGYGLTTKGGPKEVGTSTTGAVVMTLVTVSLMDVVLTQILFG 251 >gi|294816012|ref|ZP_06774655.1| Putative YrbE family protein [Streptomyces clavuligerus ATCC 27064] gi|326444354|ref|ZP_08219088.1| putative YrbE family protein [Streptomyces clavuligerus ATCC 27064] gi|294328611|gb|EFG10254.1| Putative YrbE family protein [Streptomyces clavuligerus ATCC 27064] Length = 293 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 63/242 (26%), Positives = 108/242 (44%) Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 H G + T E S ++ L I Q ++V + L+S GAVIA Q Sbjct: 46 HETGRFFALTAEIVRSVFRRPFQLREFIEQFWFVASVTILPAALVSIPFGAVIALQVGSL 105 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 Q GA+ F+ + +++ L+ A++IAG GSAI A++GS KI EE+DA+ MG+ Sbjct: 106 TQQLGAQSFTGGASVLAVIQQASPLIVALLIAGAGGSAICADLGSRKIREELDAMEVMGV 165 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 ++ L+ PR+ A ++ LL + + +G D + + F + A L + Sbjct: 166 SPIQRLVVPRVLATMLVAFLLNGMISVVGTLGGYFFNVIMQDGTPGAYLASFSALAQLPD 225 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 ++ KA G+VA G +G V VV + ++ ++ + Y Sbjct: 226 LYISEFKALVFGFIAGVVAAHRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMIITAIYL 285 Query: 370 AI 371 + Sbjct: 286 QV 287 >gi|289645181|ref|ZP_06477196.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] gi|289505006|gb|EFD26089.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] Length = 286 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 88/177 (49%), Gaps = 13/177 (7%) Query: 198 FSIDLMSIL-------------QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 ++ DL+S+L +REI T + +AG G+A+ A++G+ +I EE+DA+ Sbjct: 92 YAYDLLSLLGGQNRIGTYFVMASIREISPFCTGMAVAGVMGTAMAADLGARRIREELDAL 151 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 + +G+D R+L+ PR+ A+ I TI+ II A + +F+ F S+ Sbjct: 152 KVLGVDSTRMLVLPRVLAITIMTVAFTIIGGLLGIIMAMTSATVFGTTSVGGYFANFLSS 211 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 T + ++K+ IG+V ++G V S +G+ V VV + V +I+ Sbjct: 212 LTTPELVGVVVKSTLTGTFIGVVCAQKGLTVRGGSEGVGRAVNEAVVLCFAAVWVIN 268 >gi|242073950|ref|XP_002446911.1| hypothetical protein SORBIDRAFT_06g024700 [Sorghum bicolor] gi|241938094|gb|EES11239.1| hypothetical protein SORBIDRAFT_06g024700 [Sorghum bicolor] Length = 338 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 49/215 (22%), Positives = 106/215 (49%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 +L+ Q+ VG V +L + G Q + ++ G ++++ RE+ + Sbjct: 112 NLLAQLRRVGPGSAGVALLTAAFVGMAFTIQFVREFTRLGLHRSVGGVLALALARELSPV 171 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TAV+ AGR GSA AE+G+M+++E+ D +R +G V L+ PR+ A +++LP+LT+++ Sbjct: 172 VTAVVAAGRVGSAFAAELGTMQVSEQTDTLRVLGAHPVDYLVVPRVLACVLALPVLTLIS 231 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 + ++ + + + ++ ++ + L+K+ I +V+ G Sbjct: 232 FALGLASSAFLADSVFGVSVSIILESARRALRPWDLISSLLKSQVFGAIIAVVSCAWGVT 291 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+ T+ VV S+ + + D + +F Sbjct: 292 THGGAKGVGESTTSAVVVSLVGIFVADFALSCLFF 326 >gi|11465859|ref|NP_054003.1| hypothetical protein PopuCp208 [Porphyra purpurea] gi|1723414|sp|P51393|YCF63_PORPU RecName: Full=Probable ABC transporter permease protein ycf63 gi|1276859|gb|AAC08279.1| ORF263 [Porphyra purpurea] Length = 263 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/222 (27%), Positives = 110/222 (49%), Gaps = 14/222 (6%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ------- 207 SL Q+Y VG P + I+ +T I+ Q+++ E +D S L Sbjct: 36 SLAEQIYLVG----PGSLNITLLTACFISMVFTMQIAK---EFLHLDAASALGAVIVIAF 88 Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267 RE+ +LTAV+IAG+ GS+ AEI +M+ E+IDA+ + + + L+ P++ A I L Sbjct: 89 TRELSPVLTAVIIAGKIGSSFTAEIATMETTEQIDALYLLNTNPIDYLVFPKVAACCIML 148 Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327 P+L+ ++ ++I + V + Y IP ++F ++++ F+ L K+ I + Sbjct: 149 PILSTISLTASIAISIFVSFVMYGIPSSIFLKSAFLALSVSDFFSCLQKSLCFGTIIAFI 208 Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + + G + +G T+ VV + + I D + + F F Sbjct: 209 SCQWGLTSSGGAKGVGNSTTSSVVTILLTIFITDFILSYFMF 250 >gi|254476887|ref|ZP_05090273.1| membrane protein [Ruegeria sp. R11] gi|214031130|gb|EEB71965.1| membrane protein [Ruegeria sp. R11] Length = 266 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/217 (27%), Positives = 108/217 (49%), Gaps = 17/217 (7%) Query: 156 LIRQMYY----------VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 ++R YY VG +PVV L + TG +A Q ++F AE +++I Sbjct: 41 MVRPPYYPREVLNALLQVGWLSLPVVGLTAIFTGGALALQIYAGGARFNAEAVVPQIVAI 100 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 +RE+G +L +MIA R S+I AEI +MK+ E+IDA+ T+ ++ L++PR+ A ++ Sbjct: 101 GMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQIDALVTLSTHPMKYLVAPRVLAALL 160 Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325 ++P+L + + I+G +V + A + +I + L+K A G Sbjct: 161 TVPVLVGVGDIIGIMGGYVVATQNLGFNPAAYLKNTVDFLEARDIISSLVK----GAAFG 216 Query: 326 IVAMKEGFAVGVHSNSLGKKV---TTCVVQSISIVII 359 +A G G+ S + V T V++ +++I+ Sbjct: 217 TIAATMGCYYGMQSGRGAQGVGRATKGSVEAAAVLIL 253 >gi|226532225|ref|NP_001143055.1| hypothetical protein LOC100275524 [Zea mays] gi|194697070|gb|ACF82619.1| unknown [Zea mays] gi|195613586|gb|ACG28623.1| hypothetical protein [Zea mays] Length = 335 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 50/215 (23%), Positives = 106/215 (49%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 +L+ Q+ VG V +L + G Q + ++ G ++++ RE+ + Sbjct: 109 NLLAQLRRVGPGSAGVALLTAAFVGMAFTIQFVREFTRLGLHRSVGGVLALALARELSPV 168 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TAV+ AGR GSA AE+G+M+++E+ D +R +G V L+ PR+ A +++LP+LT+++ Sbjct: 169 VTAVVAAGRVGSAFAAELGTMQVSEQTDTLRVLGAHPVDYLVVPRVLACVLALPVLTLIS 228 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 + ++ + + + ++ ++ + L+K+ I +V+ G Sbjct: 229 FALGLASSAFLADSVFGVSVSIILESARRALRPWDLISSLLKSQVFGAIIAVVSCAWGVT 288 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+ T+ VV S+ + I D + +F Sbjct: 289 THGGAKGVGESTTSAVVVSLVGIFIADFALSCLFF 323 >gi|228471177|ref|ZP_04055990.1| conserved hypothetical protein [Porphyromonas uenonis 60-3] gi|228306992|gb|EEK16074.1| conserved hypothetical protein [Porphyromonas uenonis 60-3] Length = 251 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/219 (27%), Positives = 113/219 (51%), Gaps = 9/219 (4%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 K+ F LIR++ G+ + +V++ISF G VI Q + ++ F+I S Sbjct: 28 KWGIFFKQLIREIAKYGLDSIWIVVIISFFIGTVITIQLSINMNSPLIPHFTIGYAS--- 84 Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 REI L + +++AG+ GS+I +E+ +M++ E+IDA+ MG++ LI P+I Sbjct: 85 -REIMFLEFSSSIMCLILAGKVGSSIASELATMRVTEQIDAMEIMGVNSANFLILPKILG 143 Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322 L++ +P+L++++ + ++G + + I + F + NIF +IK+ A Sbjct: 144 LMLFIPVLSVISMSTGLVGGYLATYFIPTITPSDFEMGLQTFFVTRNIFYSIIKSLVYAF 203 Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 I A G+ V + +G+ T VV S ++++ D Sbjct: 204 IISSGASYFGYTVKGGALGVGRASTNAVVSSCVLILLAD 242 >gi|325300148|ref|YP_004260065.1| hypothetical protein Bacsa_3064 [Bacteroides salanitronis DSM 18170] gi|324319701|gb|ADY37592.1| protein of unknown function DUF140 [Bacteroides salanitronis DSM 18170] Length = 246 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 66/242 (27%), Positives = 117/242 (48%), Gaps = 20/242 (8%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG I G + + + + + +M +G++ + +V+LISF GAVI Q + Sbjct: 8 LGKYIMLMGRVFSRPERVRMYFKQYVNEMAQLGINSIGIVLLISFFIGAVICIQIKLNIE 67 Query: 192 QFGAEIFSIDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 F + + REI +L + +++AG+ GS I +E+G+M++ ++IDA+ Sbjct: 68 SPWMPRFVVGYTT----REILLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEI 123 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAVFFSRF 301 MG++ LI P+I LI +P+L + F+ +IGA W D+ + + + Sbjct: 124 MGVNSASYLILPKILGLITMIPVLVTFSIFAGVIGAFCTAWFAGIMNATDLEYGIQYCFV 183 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 ++ IK+ F A I V+ G+ V S ++GK T VV S S++I+ Sbjct: 184 E-----WYVWCSFIKSFFFAFIISSVSAFFGYTVEGGSIAVGKASTDAVVSS-SVLILFS 237 Query: 362 SL 363 L Sbjct: 238 DL 239 >gi|300728342|ref|ZP_07061707.1| conserved hypothetical protein [Prevotella bryantii B14] gi|299774407|gb|EFI71034.1| conserved hypothetical protein [Prevotella bryantii B14] Length = 252 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 69/245 (28%), Positives = 121/245 (49%), Gaps = 22/245 (8%) Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ- 189 +LG I G+ + + + + I++M +GV + +V+LISF GAVI Q Sbjct: 13 VLGTYIQLMGKVFSRPERLRMYSKQYIKEMTQLGVDSIGIVLLISFFIGAVICIQMKLNI 72 Query: 190 ----LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 + ++ A + ++M L E + ++++G+ GS I +E+G+M++ ++IDA+ Sbjct: 73 QSPWMPRWVAGYTTREIM----LLEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALD 128 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MG++ LI P+I AL+ +P L I ++ I+GA Y S T Sbjct: 129 IMGVNSASYLILPKIAALVTIMPFLVIFSSAMGIVGA------YGTAYIGQILSPEDLTL 182 Query: 306 TLAN------IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 + + I+ +IK+ F A I V+ G+ V S +GK TT VV S S++I+ Sbjct: 183 GIQHSFNQWFIWMSIIKSLFFAFIISSVSSYFGYTVEGGSVEVGKASTTAVVNS-SVLIL 241 Query: 360 IDSLF 364 +F Sbjct: 242 FSDVF 246 >gi|320007322|gb|ADW02172.1| protein of unknown function DUF140 [Streptomyces flavogriseus ATCC 33331] Length = 282 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 65/217 (29%), Positives = 105/217 (48%), Gaps = 4/217 (1%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I Q ++V + L+S GAVIA Q Q GA+ F+ + +++ L+ Sbjct: 62 IEQFWFVASVTILPAALVSIPFGAVIALQVGSLTEQLGAQSFTGGASVLAVIQQASPLIV 121 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++IAG +GSAI A++GS KI EE+DA+ MG+ V+ L+ PR+ A + LL L + Sbjct: 122 ALLIAGAAGSAICADLGSRKIREELDAMEVMGVSPVQRLVVPRVLATMFVAVLLNGLVSV 181 Query: 277 SAIIGASI--VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 +G VI + P A + + F + A L +++ G +KA GIVA G Sbjct: 182 VGTLGGYFFNVIMQ-GGTPGA-YLASFSALAQLPDLYVGELKALIFGFIAGIVAAYRGLN 239 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +G V VV + ++ ++ + Y I Sbjct: 240 PRGGPKGVGDAVNQSVVITFMLLFAVNMVLTAIYLQI 276 >gi|284043083|ref|YP_003393423.1| hypothetical protein Cwoe_1620 [Conexibacter woesei DSM 14684] gi|283947304|gb|ADB50048.1| protein of unknown function DUF140 [Conexibacter woesei DSM 14684] Length = 246 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 1/145 (0%) Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 +RE +TA+++AG +G+AI A++G+ KI EE+DA++ +G+D V+ L+ PR AL++ Sbjct: 75 SIREFAPFVTAIVLAGVAGTAITADLGARKIREELDALQVLGVDPVKNLVVPRFLALMLV 134 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326 L + A + G I P FF+ F + A+ +++ L+K I I Sbjct: 135 TGLFDVYALLFGVFGGVIATL-VNGAPLGPFFATFLTNASTTDLWGSLLKTTLFGAIIAI 193 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVV 351 V +G + +G+ V VV Sbjct: 194 VCCYKGMTASGGAEGVGRAVNQAVV 218 >gi|282878075|ref|ZP_06286880.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310] gi|281299815|gb|EFA92179.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310] Length = 250 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 112/225 (49%), Gaps = 22/225 (9%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 + + F +++M +GV +P+V+LISF GAVI Q + ++ ++ Sbjct: 29 RMRMFFKRYVKEMCQLGVDSIPLVLLISFFIGAVICIQMKVNVQSPWMPRWTTGYVT--- 85 Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 REI +L +++AG+ GS I +E+G+M++ ++IDA+ MG++ LI P+I Sbjct: 86 -REIFLLEFASAFMCLILAGKVGSNIASELGTMRVTQQIDALDIMGVNPASYLILPKIAG 144 Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR------FHSTATLANIFTGLIK 316 LI +P L I ++ + IIGA Y ++ S F + + ++ +IK Sbjct: 145 LITIMPFLVIFSSVAGIIGA-------YGTAYSGVLSPDDLTAGFQYSFNVWFVWMSIIK 197 Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + A I V+ G++V S +G+ T VV S +V+ D Sbjct: 198 SIVFAFIIASVSSFYGYSVRGGSVEVGEASTNAVVSSSVLVLFAD 242 >gi|269124784|ref|YP_003298154.1| hypothetical protein Tcur_0519 [Thermomonospora curvata DSM 43183] gi|268309742|gb|ACY96116.1| protein of unknown function DUF140 [Thermomonospora curvata DSM 43183] Length = 288 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/203 (26%), Positives = 100/203 (49%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V+ +SF G I QG L GAE F + S +REI ++ AV +A + GSA Sbjct: 79 VIFTMSFFVGTEIGLQGYTGLRSIGAESFMGLVGSFANVREITPVIAAVALAAQCGSAFT 138 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AE+G+M+I+EEIDA+ MG+ L+ R+ A +I+L L ++A F++ ++ ++ Sbjct: 139 AELGAMRISEEIDALEVMGISSFTYLVCTRVLAALIALVPLYLIALFASFFSTRLITTQF 198 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 + + V+ F + ++ IK A A+ + G+ +G+ Sbjct: 199 FGLAPGVYDYYFQLYLPMIDLVYSSIKVAVFAFAVIAIHCYYGYYATGGPAGVGRATGRA 258 Query: 350 VVQSISIVIIIDSLFAIFYFAIG 372 + SI +++ ++ L + ++ G Sbjct: 259 IRLSIIVIVTLNLLLSYLFWGNG 281 >gi|124005927|ref|ZP_01690765.1| domain of unknown function superfamily [Microscilla marina ATCC 23134] gi|123988610|gb|EAY28251.1| domain of unknown function superfamily [Microscilla marina ATCC 23134] Length = 248 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/138 (31%), Positives = 81/138 (58%), Gaps = 1/138 (0%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSI-DLMSIL 206 +FK ++ I + +G+ V +V++ S GAV A Q A+ L ++ I ++ + Sbjct: 20 RFKVYVRLTIDECMRIGIDSVFIVVITSTFIGAVAAVQTAYNLVSPAIPLYVIGTIVRDM 79 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 + E +T +++AG+ GS I +G+M+I E++DAI MG++ L+ P+I A +I+ Sbjct: 80 AILEFAPTITCIVLAGKVGSNIAGGLGTMRITEQVDAIEVMGINAASYLVLPKITAALIT 139 Query: 267 LPLLTILANFSAIIGASI 284 +P+L ++A F +I+G I Sbjct: 140 IPMLCVIAGFLSIMGGFI 157 >gi|145220618|ref|YP_001131296.1| hypothetical protein Mflv_0012 [Mycobacterium gilvum PYR-GCK] gi|145213104|gb|ABP42508.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] Length = 312 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/222 (25%), Positives = 107/222 (48%), Gaps = 4/222 (1%) Query: 147 YKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206 ++F+ F +RQ ++ + V +L++ G ++ Q A Q GA + + Sbjct: 86 FQFQEF----VRQGAFMAGTAVLPTVLVALPIGVTLSIQFALLAGQVGATSLAGAASGLA 141 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 +R+ L A+++A GSAI A++GS K+ EE DA+ MG+ +R L+ PR A I+ Sbjct: 142 VIRQAASLTAAILMAAAVGSAITADLGSRKMREETDAMEVMGVSVIRRLVVPRFAAAIMI 201 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326 LT + F + + + + + F + F S AT ++ L+KA + I Sbjct: 202 GVALTGVVCFVGFLASYLFNVYFQNGAPGSFVATFASFATTGDMIVALVKAVIFGAIVAI 261 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 V+ ++G + + V VV+SI ++++++ + Y Sbjct: 262 VSCQKGLSTQGGPTGVANSVNAAVVESILVLMVVNVAISQLY 303 >gi|126728696|ref|ZP_01744511.1| membrane protein [Sagittula stellata E-37] gi|126710626|gb|EBA09677.1| membrane protein [Sagittula stellata E-37] Length = 260 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 44/122 (36%), Positives = 74/122 (60%) Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219 M VG +PVV L +F TGA +A Q ++F AE +++I +RE+G +L +M Sbjct: 49 MMNVGWLSLPVVGLTAFFTGAALALQIYSGGARFNAEAVVPQIVAIGMVRELGPVLVGLM 108 Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279 IA R S+I AEI +MK+ E+IDA+ T+ + ++ L++PR+ A ++ +P L + + + Sbjct: 109 IAARVTSSIAAEIATMKVTEQIDALTTLSTNPMKYLVAPRLLAALLVVPALVGIGDVIGV 168 Query: 280 IG 281 G Sbjct: 169 FG 170 >gi|126696848|ref|YP_001091734.1| putative transporter, membrane component [Prochlorococcus marinus str. MIT 9301] gi|126543891|gb|ABO18133.1| possible transporter, membrane component [Prochlorococcus marinus str. MIT 9301] Length = 251 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 58/211 (27%), Positives = 105/211 (49%), Gaps = 7/211 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L Q+ G + +V++ G V Q A QL+ G L+++ RE+ LL Sbjct: 34 LFDQLMESGPGSLLIVLITGIAAGTVFNIQVASQLTSMGVSSEIGGLLAVGMAREMAPLL 93 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA ++ G+ +A A++G+MK+ E+I+AI + + V+ L+ PR+ +++I P+ +L Sbjct: 94 TATLMTGKVATAYAAQLGTMKVTEQIEAITMLRTEPVQYLVVPRLLSMVIMSPIQCLL-- 151 Query: 276 FSAIIGASIVIWK--YYDIPFAVFFSRFHS---TATLANIFTGLIKAPFMACAIGIVAMK 330 F ++ S IW +Y +P VF++ S + T ++ + LIK+ I I+A Sbjct: 152 FLSVALWSGQIWSTIFYKVPPIVFWTSVRSGNVSLTSTDLTSMLIKSVVFGLLIAIIACG 211 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 G +G T VV ++ V ++D Sbjct: 212 YGLTTKGGPKEVGTSTTGAVVMTLVTVSLMD 242 >gi|326527561|dbj|BAK08055.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 341 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 51/218 (23%), Positives = 107/218 (49%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 +L+ Q+ VG V +L + G Q + ++ G ++++ RE+ + Sbjct: 114 NLLAQLRRVGPGSAGVSLLTAAFVGMAFTIQFVREFTRLGLHRSVGGVLALALARELTPV 173 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TAV+ AGR GSA AE+G+M+++E+ D +R +G + L+ PR+ A +++LP+LT+++ Sbjct: 174 VTAVVAAGRVGSAFAAELGTMQVSEQTDTLRVLGSQPIDYLVVPRVLACVLALPVLTLIS 233 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 + ++ + + + ++ ++ + LIK+ I +V+ G Sbjct: 234 FALGLASSAFLADAVFGVSTSIILESARKALRPWDLISALIKSQVFGAIIAVVSCAWGVT 293 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 + +G+ T+ VV S+ + I D + +F G Sbjct: 294 THGGAKGVGESTTSAVVISLVGIFIADFALSCLFFQAG 331 >gi|325268715|ref|ZP_08135344.1| ABC superfamily ATP binding cassette transporter permease protein [Prevotella multiformis DSM 16608] gi|324988959|gb|EGC20913.1| ABC superfamily ATP binding cassette transporter permease protein [Prevotella multiformis DSM 16608] Length = 248 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 66/224 (29%), Positives = 110/224 (49%), Gaps = 14/224 (6%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSIL 206 + + FL +++M +GV + +V+LISF GAVI Q + S + S + + Sbjct: 26 RMRMFLKRYVKEMSQLGVDSIGIVLLISFFIGAVICIQIKLNVQSPWMPHWVSGYVTREI 85 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 L E + ++++G+ GS I +E+G+M++ ++IDA+ MG++ LI P++ LI Sbjct: 86 MLLEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALEIMGINSASYLILPKMLGLITI 145 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG------LIKAPFM 320 +P L I + + IIGA Y + TA L + F +IK F Sbjct: 146 MPFLVIFSAATGIIGA------YATAYIGHIITPIDLTAGLQHDFNAWFMWMSIIKGFFF 199 Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A I V+ G+ V S +GK T VV S S++I+ +F Sbjct: 200 AFIISSVSSYMGYTVKGGSVEVGKASTDAVVCS-SVLILFSDVF 242 >gi|60683336|ref|YP_213480.1| hypothetical protein BF3899 [Bacteroides fragilis NCTC 9343] gi|60494770|emb|CAH09576.1| putative membrane protein [Bacteroides fragilis NCTC 9343] gi|301164825|emb|CBW24385.1| putative membrane protein [Bacteroides fragilis 638R] Length = 254 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 64/227 (28%), Positives = 116/227 (51%), Gaps = 25/227 (11%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 + + F I+++ +GV+ + +V+LISF GAVI Q + +++ ++ Sbjct: 31 RMRMFFRQYIKEIEQLGVNSIGIVLLISFFIGAVITIQIKLNIESPWMPRWTVGYVT--- 87 Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 REI +L + +++AG+ GS I +E+G+M++ ++IDA+ MG++ LI P+I A Sbjct: 88 -REILLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGVNSANYLILPKITA 146 Query: 263 LIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAV---FFSRFHSTATLANIFTGL 314 ++ +P+L + F+ IIGA W D+ + + F F ++ G+ Sbjct: 147 MVTMIPILVTFSIFAGIIGAFATCWFGGIMTATDLEYGLQYMFVEWF--------VWCGI 198 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 IK+ F A I V+ G+ V S +GK T VV S +++ D Sbjct: 199 IKSLFFAFIIASVSSFFGYTVEGGSIEVGKASTDSVVSSSVLILFAD 245 >gi|169631592|ref|YP_001705241.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977] gi|169243559|emb|CAM64587.1| Putative YrbE family protein [Mycobacterium abscessus] Length = 285 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 4/214 (1%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 +RQ + + V VIL++ G ++ Q A Q GA + I +R+ L+ Sbjct: 65 VRQGAFQAATAVMPVILVTLPIGVTLSIQFALLAGQVGATSLAGAASGIAIIRQAASLVA 124 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV++A GSAI A++GS + EE DA+ MG+ +R L+ PR A I+ LT + F Sbjct: 125 AVLMASAVGSAITADLGSRTMREETDAMEVMGVSVIRRLVVPRFAAAIMIAVALTAVVCF 184 Query: 277 SAIIGASI--VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 +GA + V W+ P F S F S AT ++ ++KA + +V+ ++G + Sbjct: 185 VGFLGAYLFNVYWQ-GGAP-GSFVSTFASFATPDDMVLAVLKAIIYGAIVAVVSCQKGLS 242 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + V VV+SI ++++++ + Y Sbjct: 243 TKGGPIGVANSVNAAVVESILLLMVVNVAISQLY 276 >gi|255011705|ref|ZP_05283831.1| hypothetical protein Bfra3_21365 [Bacteroides fragilis 3_1_12] gi|313149539|ref|ZP_07811732.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313138306|gb|EFR55666.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 247 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 64/227 (28%), Positives = 116/227 (51%), Gaps = 25/227 (11%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 + + F I+++ +GV+ + +V+LISF GAVI Q + +++ ++ Sbjct: 24 RMRMFFRQYIKEIEQLGVNSIGIVLLISFFIGAVITIQIKLNIESPWMPRWTVGYVT--- 80 Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 REI +L + +++AG+ GS I +E+G+M++ ++IDA+ MG++ LI P+I A Sbjct: 81 -REILLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGVNSANYLILPKITA 139 Query: 263 LIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAV---FFSRFHSTATLANIFTGL 314 ++ +P+L + F+ IIGA W D+ + + F F ++ G+ Sbjct: 140 MVTMIPILVTFSIFAGIIGAFATCWFGGIMTATDLEYGLQYMFVEWF--------VWCGI 191 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 IK+ F A I V+ G+ V S +GK T VV S +++ D Sbjct: 192 IKSLFFAFIIASVSSFFGYTVEGGSIEVGKASTDSVVSSSVLILFAD 238 >gi|53715368|ref|YP_101360.1| hypothetical protein BF4084 [Bacteroides fragilis YCH46] gi|253567257|ref|ZP_04844707.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|265767855|ref|ZP_06095387.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|52218233|dbj|BAD50826.1| conserved hypothetical protein [Bacteroides fragilis YCH46] gi|251944088|gb|EES84607.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|263252527|gb|EEZ24055.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 247 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 64/227 (28%), Positives = 116/227 (51%), Gaps = 25/227 (11%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 + + F I+++ +GV+ + +V+LISF GAVI Q + +++ ++ Sbjct: 24 RMRMFFRQYIKEIEQLGVNSIGIVLLISFFIGAVITIQIKLNIESPWMPRWTVGYVT--- 80 Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 REI +L + +++AG+ GS I +E+G+M++ ++IDA+ MG++ LI P+I A Sbjct: 81 -REILLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGVNSANYLILPKITA 139 Query: 263 LIISLPLLTILANFSAIIGASIVIW-----KYYDIPFAV---FFSRFHSTATLANIFTGL 314 ++ +P+L + F+ IIGA W D+ + + F F ++ G+ Sbjct: 140 MVTMIPILVTFSIFAGIIGAFATCWFGGIMTATDLEYGLQYMFVEWF--------VWCGI 191 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 IK+ F A I V+ G+ V S +GK T VV S +++ D Sbjct: 192 IKSLFFAFIIASVSSFFGYTVEGGSIEVGKASTDSVVSSSVLILFAD 238 >gi|123969056|ref|YP_001009914.1| putative transporter, membrane component [Prochlorococcus marinus str. AS9601] gi|123199166|gb|ABM70807.1| possible transporter, membrane component [Prochlorococcus marinus str. AS9601] Length = 251 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 58/211 (27%), Positives = 105/211 (49%), Gaps = 7/211 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L Q+ G + +V++ G V Q A QL+ G L+++ RE+ LL Sbjct: 34 LFDQLMESGPGSLLIVLITGIAAGTVFNIQVASQLTSMGVSSEIGGLLAVGMAREMAPLL 93 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA ++ G+ +A A++G+MK+ E+I+AI + + V+ L+ PR+ +++I P+ +L Sbjct: 94 TATLMTGKVATAYAAQLGTMKVTEQIEAITMLRTEPVQYLVVPRLLSMVIMSPIQCLL-- 151 Query: 276 FSAIIGASIVIWK--YYDIPFAVFFSRFHS---TATLANIFTGLIKAPFMACAIGIVAMK 330 F ++ S IW +Y +P VF++ S + T ++ + LIK+ I I+A Sbjct: 152 FLSVALWSGQIWSTIFYKVPPIVFWTSVRSGNVSLTSTDLTSMLIKSVVFGLLISIIACG 211 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 G +G T VV ++ V ++D Sbjct: 212 YGLTTKGGPKEVGTSTTGAVVMTLVTVSLMD 242 >gi|325855171|ref|ZP_08171794.1| hypothetical protein HMPREF9303_0352 [Prevotella denticola CRIS 18C-A] gi|327312571|ref|YP_004328008.1| hypothetical protein HMPREF9137_0267 [Prevotella denticola F0289] gi|325483908|gb|EGC86852.1| hypothetical protein HMPREF9303_0352 [Prevotella denticola CRIS 18C-A] gi|326944406|gb|AEA20291.1| conserved hypothetical protein [Prevotella denticola F0289] Length = 248 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 66/224 (29%), Positives = 110/224 (49%), Gaps = 14/224 (6%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSIL 206 + + FL +++M +GV + +V+LISF GAVI Q + S + S + + Sbjct: 26 RMRMFLKRYVKEMSQLGVDSIGIVLLISFFIGAVICIQIKLNVQSPWMPHWVSGYVTREI 85 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 L E + ++++G+ GS I +E+G+M++ ++IDA+ MG++ LI P++ LI Sbjct: 86 MLLEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALEIMGINSASYLILPKMLGLITI 145 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT------GLIKAPFM 320 +P L I + + IIGA Y + TA L + F +IK F Sbjct: 146 MPFLVIFSAATGIIGA------YATAYIGHIITPIDLTAGLQHDFNPWFMWMSIIKGFFF 199 Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A I V+ G+ V S +GK T VV S S++I+ +F Sbjct: 200 AFIISSVSSYMGYTVKGGSVEVGKASTDAVVCS-SVLILFSDVF 242 >gi|300784333|ref|YP_003764624.1| ABC transporter permease [Amycolatopsis mediterranei U32] gi|299793847|gb|ADJ44222.1| ABC transport system permease protein [Amycolatopsis mediterranei U32] Length = 262 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 58/202 (28%), Positives = 106/202 (52%), Gaps = 6/202 (2%) Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 L++ GAVIA Q +Q GA+ F+ ++ +++ L+TA+++AG GSA+ A+I Sbjct: 58 LVAIPFGAVIALQLGSLTAQIGAQSFTGAASALAIVQQASPLITALLVAGAGGSAVCADI 117 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA---SIVIWKY 289 G+ KI EEIDA+ +G++ ++ LI PR+ A ++ LL L + ++G ++V+ Sbjct: 118 GARKIREEIDAMEVLGVNPIQRLIVPRVLAAMVVSVLLNGLVSVVGVLGGYFFNVVL--Q 175 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 P A + + F++ A + +++ IKA G+VA G +G V Sbjct: 176 GGTPGA-YLASFNALAQVPDLWVSEIKALLYGFVAGVVAAFRGLNPAGGPKGVGDAVNQA 234 Query: 350 VVQSISIVIIIDSLFAIFYFAI 371 VV + ++ +I+ + Y I Sbjct: 235 VVITFLLLFLINVVLTAIYLRI 256 >gi|91070390|gb|ABE11304.1| putative transporter, membrane component [uncultured Prochlorococcus marinus clone HF10-88H9] Length = 251 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 58/211 (27%), Positives = 105/211 (49%), Gaps = 7/211 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L Q+ G + +V++ G V Q A QL+ G L+++ RE+ LL Sbjct: 34 LFDQLMESGPGSLLIVLITGIAAGTVFNIQVASQLTSMGVSSEIGGLLAVGMAREMAPLL 93 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA ++ G+ +A A++G+MK+ E+I+AI + + V+ L+ PR+ +++I P+ +L Sbjct: 94 TATLMTGKVATAYAAQLGTMKVTEQIEAITMLRTEPVQYLVVPRLLSMVIMSPIQCLL-- 151 Query: 276 FSAIIGASIVIWK--YYDIPFAVFFSRFHS---TATLANIFTGLIKAPFMACAIGIVAMK 330 F ++ S IW +Y +P VF++ S + T ++ + LIK+ I I+A Sbjct: 152 FLSVALWSGQIWSTIFYKVPPIVFWTSVRSGNVSLTSTDLTSMLIKSVVFGLLISIIACG 211 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 G +G T VV ++ V ++D Sbjct: 212 YGLTTKGGPKEVGTSTTGAVVMTLVTVSLMD 242 >gi|323343316|ref|ZP_08083543.1| ABC superfamily ATP binding cassette transporter permease protein [Prevotella oralis ATCC 33269] gi|323095135|gb|EFZ37709.1| ABC superfamily ATP binding cassette transporter permease protein [Prevotella oralis ATCC 33269] Length = 260 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 62/219 (28%), Positives = 112/219 (51%), Gaps = 4/219 (1%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSIL 206 + + F +++M +G+ + +V+LISF GAVI Q + S + S + Sbjct: 38 RMRMFFKQYVKEMSQLGIDSIGIVLLISFFIGAVICIQMKLNIQSPWMPRWVSGYTTREI 97 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 L E + +++AG+ GS I +E+G+M++ ++IDA+ MG++ LI P+I L+ Sbjct: 98 MLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALDIMGVNSASYLILPKIMGLVTI 157 Query: 267 LPLLTILANFSAIIGASIVIW-KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325 +P L I ++ + I+GA + + P + HS ++ +IK+ F A I Sbjct: 158 MPFLVIFSSLTGILGAYGTAYIGHILTPEDLTLGLQHSFNPWF-VWMSIIKSLFFAFIIA 216 Query: 326 IVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 V+ G++V S +GK T VV S S++I+ +F Sbjct: 217 SVSSYFGYSVEGGSVEVGKASTDAVVSS-SVLILFSDVF 254 >gi|125549278|gb|EAY95100.1| hypothetical protein OsI_16916 [Oryza sativa Indica Group] Length = 345 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 49/215 (22%), Positives = 106/215 (49%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 +L+ Q+ VG V +L + G Q + ++ G ++++ RE+ + Sbjct: 119 NLLAQLRRVGPGSAGVSLLTAAFVGMAFTIQFVREFTRLGLHRSVGGVLALALSRELSPV 178 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TAV+ AGR GSA AE+G+M+++E+ D +R +G V L+ PR+ A +++LP+LT+++ Sbjct: 179 VTAVVAAGRVGSAFAAELGTMQVSEQTDTLRVLGAQPVDYLVVPRVVACVLALPVLTLMS 238 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 + ++ + + + ++ ++ + L+K+ I +V+ G Sbjct: 239 FALGLASSAFLADSIFGVSTSIILESARRALRPWDLISSLLKSQVFGAIIAVVSCAWGVT 298 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+ T+ VV S+ + + D + +F Sbjct: 299 THGGAKGVGESTTSAVVVSLVGIFVADFALSCLFF 333 >gi|226304401|ref|YP_002764359.1| YrbE family protein [Rhodococcus erythropolis PR4] gi|226183516|dbj|BAH31620.1| putative YrbE family protein [Rhodococcus erythropolis PR4] Length = 269 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 94/182 (51%), Gaps = 2/182 (1%) Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 + GA +S +++ + + + L+ A+M+AG +GSAI ++GS KI EEIDA+ MG+D Sbjct: 82 GRIGAGGYSGAVVAFIIVGQAAALVCALMMAGVAGSAICTDLGSRKIREEIDAMEVMGID 141 Query: 251 FVRILISPR-IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 + L++PR + A+I+SL L +++ F +I + +P F + F ++ Sbjct: 142 VIERLVAPRLVAAVIVSLALCSMV-TFGGVIACYLYHIYVQHLPAGTFMATFSQYGRSSD 200 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 L+KA A +VA +G + V VV + ++V I++++ + Y Sbjct: 201 FVMALVKAAIFGLASTLVATFKGLHAKGGPRGVADAVNEAVVIAFALVFIVNTVLSALYT 260 Query: 370 AI 371 I Sbjct: 261 VI 262 >gi|325673338|ref|ZP_08153030.1| ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] gi|325555928|gb|EGD25598.1| ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] Length = 269 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 88/181 (48%) Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 + GA +S +++ + + + L+ A+M+AG +GSAI ++GS KI EEIDA+ MG+D Sbjct: 82 GRIGAGGYSGAVVAFIIVGQASALVCALMMAGVAGSAICTDLGSRKIREEIDAMEVMGID 141 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 V L++PR+ A ++ L + F ++ + +P F + F A+ Sbjct: 142 VVERLVAPRLLAAVVVSVALCAMVTFGGVMACYLYHIYVQHLPAGTFLATFGQYGRTADF 201 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 L+KA A +VA +G + V VV + ++V ++++ + Y Sbjct: 202 VMALVKAAIFALTSTLVATFKGLHAKGGPRGVADAVNEAVVIAFALVFVVNTALSALYTV 261 Query: 371 I 371 I Sbjct: 262 I 262 >gi|282866015|ref|ZP_06275063.1| protein of unknown function DUF140 [Streptomyces sp. ACTE] gi|282559054|gb|EFB64608.1| protein of unknown function DUF140 [Streptomyces sp. ACTE] Length = 283 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 66/228 (28%), Positives = 109/228 (47%), Gaps = 8/228 (3%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 ++F+ F + Q ++V + L+S GAVIA Q Q GA+ F+ + Sbjct: 56 PFQFREF----VEQFWFVASVTILPAALVSIPFGAVIALQVGSLTEQLGAQSFTGGASVL 111 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 +++ L+ A++IAG +GSAI A++GS KI EE+DA+ MG+ V+ L+ PR+ A + Sbjct: 112 AVIQQASPLIVALLIAGAAGSAICADLGSRKIREELDAMEVMGVSPVQRLVVPRVLATMG 171 Query: 266 SLPLLTILANFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323 LL L + +G VI + P A + + F + A L +++ G +KA Sbjct: 172 VAVLLNGLVSVVGTLGGYFFNVIMQ-GGTPGA-YLASFSALAQLPDLYIGELKALIFGFI 229 Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 GIVA G +G V VV + ++ ++ Y I Sbjct: 230 AGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFAVNMALTAIYLQI 277 >gi|229494168|ref|ZP_04387931.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229318530|gb|EEN84388.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length = 269 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 94/182 (51%), Gaps = 2/182 (1%) Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 + GA +S +++ + + + L+ A+M+AG +GSAI ++GS KI EEIDA+ MG+D Sbjct: 82 GRIGAGGYSGAVVAFIIVGQAAALVCALMMAGVAGSAICTDLGSRKIREEIDAMEVMGID 141 Query: 251 FVRILISPR-IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 + L++PR + A+I+SL L +++ F +I + +P F + F ++ Sbjct: 142 VIERLVAPRLVAAVIVSLALCSMV-TFGGVIACYLYHIYVQHLPAGTFMATFSQYGRSSD 200 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 L+KA A +VA +G + V VV + ++V I++++ + Y Sbjct: 201 FVMALVKAAVFGIASTLVATFKGLHAKGGPRGVADAVNEAVVIAFALVFIVNTVLSALYT 260 Query: 370 AI 371 I Sbjct: 261 VI 262 >gi|83584337|gb|ABC24943.1| plastid permease-like protein [Prototheca wickerhamii] Length = 248 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 71/118 (60%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + Q+ VG + V +L SF G V Q + ++ G ++ + RE+ ++T Sbjct: 115 LEQLNLVGPRSLGVCLLTSFFLGMVFTIQFIREFTRLGLTRTVGGVLGLALARELTPVVT 174 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 ++++AGR GSA AE+G+M+++E+ D++R +G D + LI+PRI A +I+ PLL I+ Sbjct: 175 SIIVAGRVGSAFAAELGTMQVSEQTDSLRVLGSDPIDYLITPRILACMIATPLLNIMC 232 >gi|318042383|ref|ZP_07974339.1| putative transporter, membrane component [Synechococcus sp. CB0101] Length = 261 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 62/267 (23%), Positives = 125/267 (46%), Gaps = 18/267 (6%) Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167 + L + + + + +SC ++G G+ A+ K + + L+ ++ G Sbjct: 8 RRLPAWLRPRCLTRLGESC----LIG------GQAMAALAKGQVGINDLMAELMEAGPGS 57 Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +VI+ G V Q A +L + GA ++++ REI +LTA ++ G+ +A Sbjct: 58 FLIVIITGLAAGTVFNIQAASELVKQGAGSTVGGILALGLAREIAPILTATLVTGKVATA 117 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI----LANFSAIIGAS 283 A++G+MK+ E+IDAI + D V+ L+ PR+ A++I P+ + +A +S + ++ Sbjct: 118 YAAQLGTMKVTEQIDAITMLRTDPVQYLVVPRVLAMLIMTPVQCLAFFAVAMWSGQVSST 177 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 ++ Y IP VF++ + +++ L+KA I +++ G +G Sbjct: 178 LL----YQIPPGVFWNSVRTWMEPSDLPAMLLKAVVFGLQIAVISCGWGLTTRGGPKEVG 233 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + V ++D + F Sbjct: 234 TSTTGAVVMILVTVSLMDVVLTQLLFG 260 >gi|284039999|ref|YP_003389929.1| hypothetical protein Slin_5158 [Spirosoma linguale DSM 74] gi|283819292|gb|ADB41130.1| protein of unknown function DUF140 [Spirosoma linguale DSM 74] Length = 243 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 48/141 (34%), Positives = 81/141 (57%), Gaps = 7/141 (4%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM---- 203 K +L +I + +GV + +V L++ GAV Q A+ L+ + I L+ Sbjct: 20 KLSVYLGLIINECTSIGVGSIFIVALVNIFIGAVTCVQTAYNLTNPFVPKYIIALIVRDS 79 Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263 SIL+L L+ +++AG+ GS I +E+G+M+I E++DA+ MG++ LI P++ A Sbjct: 80 SILELAPT---LSCIVLAGKVGSNIASELGTMRITEQVDALEVMGINSSSYLILPKVIAS 136 Query: 264 IISLPLLTILANFSAIIGASI 284 ++ PLL I+A F AI+G I Sbjct: 137 VLMFPLLVIMAAFLAILGGYI 157 >gi|312137895|ref|YP_004005231.1| integral membrane protein yrbe1a [Rhodococcus equi 103S] gi|311887234|emb|CBH46543.1| putative integral membrane protein YrbE1A [Rhodococcus equi 103S] Length = 258 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 88/181 (48%) Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 + GA +S +++ + + + L+ A+M+AG +GSAI ++GS KI EEIDA+ MG+D Sbjct: 71 GRIGAGGYSGAVVAFIIVGQASALVCALMMAGVAGSAICTDLGSRKIREEIDAMEVMGID 130 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 V L++PR+ A ++ L + F ++ + +P F + F A+ Sbjct: 131 VVERLVAPRLLAAVVVSVALCAMVTFGGVMACYLYHIYVQHLPAGTFLATFGQYGRTADF 190 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 L+KA A +VA +G + V VV + ++V ++++ + Y Sbjct: 191 VMALVKAAIFALTSTLVATFKGLHAKGGPRGVADAVNEAVVIAFALVFVVNTALSALYTV 250 Query: 371 I 371 I Sbjct: 251 I 251 >gi|168022425|ref|XP_001763740.1| ATP-binding cassette transporter, subfamily I, member 14, ABC component protein PpABCI14 [Physcomitrella patens subsp. patens] gi|162684984|gb|EDQ71382.1| ATP-binding cassette transporter, subfamily I, member 14, ABC component protein PpABCI14 [Physcomitrella patens subsp. patens] Length = 263 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 54/214 (25%), Positives = 110/214 (51%), Gaps = 2/214 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 ++Q+ VG + V +L + G V Q + ++ G ++++ RE+ ++T Sbjct: 39 LQQLELVGPRSLGVSLLTASFVGMVFTIQFVREFARLGLTRSVGGVLALALARELSPVVT 98 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A+++AGR GSA AE+G+M+++E+ D +R + D V L++PR+ A ++LP+LT + F Sbjct: 99 AIIMAGRVGSAFAAELGTMQVSEQTDTLRVLRTDPVDYLVTPRVIACCLALPILTTMC-F 157 Query: 277 SAIIGASIVIW-KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 + + AS+++ Y++ + ++ + IK+ I IV+ G Sbjct: 158 AVAMAASVLLADSVYNVSANIILESAARALQPWDLISTTIKSVVFGGIISIVSCTWGVTT 217 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+ T+ VV S+ + I D + + +F Sbjct: 218 LGGAKGVGESTTSAVVISLVCIFIADFILSWVFF 251 >gi|291298382|ref|YP_003509660.1| hypothetical protein Snas_0856 [Stackebrandtia nassauensis DSM 44728] gi|290567602|gb|ADD40567.1| protein of unknown function DUF140 [Stackebrandtia nassauensis DSM 44728] Length = 253 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 55/213 (25%), Positives = 104/213 (48%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I+Q +++ + L++ GAVIA Q Q GAE F+ + +RE G ++T Sbjct: 33 IKQAWFIASVSILPTALVAIPFGAVIALQLGSLSKQIGAESFAGAASVLAVVREAGPIVT 92 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++I+G GSA+ A++G+ KI EE+DA+ T+G+D ++ L+ PR++A + L + + Sbjct: 93 ALLISGAGGSAMCADLGARKIREELDAMETLGVDPIQRLVVPRMFAGAVVAFFLNGVVSA 152 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 I G I D + + F + +A++ + ++A ++A G Sbjct: 153 VGIAGGYIFNVYMQDGTPGSYLASFAALGQVADVVSAQLRAIVFGMVAALIACYLGMNAK 212 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 +G+ V VV + ++ + + YF Sbjct: 213 GGPKGVGQAVNVSVVVNFMVLFAFNFVMVALYF 245 >gi|317968902|ref|ZP_07970292.1| putative transporter, membrane component [Synechococcus sp. CB0205] Length = 257 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 55/219 (25%), Positives = 106/219 (48%), Gaps = 8/219 (3%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI ++ G ++++ G V Q A +L + GA ++++ REI +L Sbjct: 42 LIAELMEAGPGSFLIILITGLAAGTVFNIQAASELVKQGAGSTVGGILALGLAREIAPIL 101 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI--- 272 TA ++ G+ +A A++G+MK+ E+IDAI + D V+ L+ PR+ A+++ P+ + Sbjct: 102 TATLVTGKVATAYAAQLGTMKVTEQIDAITMLRTDPVQYLVVPRLLAMVVMTPVQCLAFF 161 Query: 273 -LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 +A +S + ++I+ Y+IP VF++ +++ L+KA I ++A Sbjct: 162 GVAIWSGQVSSAIL----YNIPPDVFWTSVRGWMQPSDLPAMLLKAGVFGLQIAVIACGW 217 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G +G T VV + V ++D + F Sbjct: 218 GLTTRGGPKEVGTSTTGAVVMILVTVSLMDVVLTQLLFG 256 >gi|261880035|ref|ZP_06006462.1| ABC superfamily ATP binding cassette transporter, permease protein [Prevotella bergensis DSM 17361] gi|270333275|gb|EFA44061.1| ABC superfamily ATP binding cassette transporter, permease protein [Prevotella bergensis DSM 17361] Length = 252 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 14/224 (6%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSIL 206 + + FL +++M +GV + +V+LISF GAVI Q + S + + + Sbjct: 30 RMRMFLKRYVKEMAQLGVDSIGIVLLISFFIGAVICIQMKVNIQSPWMPRWVTGYTTREI 89 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 L E + +++AG+ GS I +E+G+M++ ++IDA+ MG++ LI P+I L+ Sbjct: 90 MLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALDIMGINSASYLILPKIAGLVTI 149 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT------GLIKAPFM 320 +P L I ++ I+GA Y S TA + + F +IK+ F Sbjct: 150 MPFLVIFSSAMGIVGA------YATAYIGQLMSPADLTAGMNHSFNEWYMWMSIIKSLFF 203 Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A I V+ G++V S +G+ T VV S S++I+ +F Sbjct: 204 AFIIASVSSYFGYSVKGGSVDVGEASTDAVVSS-SVLILFSDVF 246 >gi|297603137|ref|NP_001053506.2| Os04g0553000 [Oryza sativa Japonica Group] gi|38345475|emb|CAE01691.2| OSJNBa0010H02.13 [Oryza sativa Japonica Group] gi|255675668|dbj|BAF15420.2| Os04g0553000 [Oryza sativa Japonica Group] Length = 344 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 49/215 (22%), Positives = 106/215 (49%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 +L+ Q+ VG V +L + G Q + ++ G ++++ RE+ + Sbjct: 118 NLLAQLRRVGPGSAGVSLLTAAFVGMAFTIQFVREFTRLGLHRSVGGVLALALSRELSPV 177 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TAV+ AGR GSA AE+G+M+++E+ D +R +G V L+ PR+ A +++LP+LT+++ Sbjct: 178 VTAVVAAGRVGSAFAAELGTMQVSEQTDTLRVLGAQPVDYLVVPRVVACVLALPVLTLMS 237 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 + ++ + + + ++ ++ + L+K+ I +V+ G Sbjct: 238 FALGLASSAFLADSIFGVSTSIILESARRALRPWDLISSLLKSQVFGAIIAVVSCAWGVT 297 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+ T+ VV S+ + + D + +F Sbjct: 298 THGGAKGVGESTTSAVVVSLVGIFVADFALSCLFF 332 >gi|117164593|emb|CAJ88139.1| putative ABC-transporter integral membrane protein [Streptomyces ambofaciens ATCC 23877] Length = 254 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 4/206 (1%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 ++F+ F + Q +++ + L+S GAVIA Q Q GA+ F+ + Sbjct: 27 PFQFREF----VEQFWFIASVTILPAALVSIPFGAVIALQVGSLTQQLGAQSFTGGASVL 82 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 +++ L+ A++IAG +GSAI A++GS I EE+DA+ MG+ V+ L+ PR+ A + Sbjct: 83 AVVQQASPLIVALLIAGAAGSAICADLGSRTIREELDAMEVMGVSPVQRLVVPRVLATMG 142 Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325 LL L + I+G + D + S F + A L +++ +KA G Sbjct: 143 VAVLLNGLVSVVGILGGYVFNVFLQDGTPGAYLSSFSALAQLPDLYVSELKALVFGFIAG 202 Query: 326 IVAMKEGFAVGVHSNSLGKKVTTCVV 351 +VA G +G V VV Sbjct: 203 VVAAYRGLNPRGGPKGVGDAVNQSVV 228 >gi|123966718|ref|YP_001011799.1| putative transporter, membrane component [Prochlorococcus marinus str. MIT 9515] gi|123201084|gb|ABM72692.1| possible transporter, membrane component [Prochlorococcus marinus str. MIT 9515] Length = 251 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 62/234 (26%), Positives = 117/234 (50%), Gaps = 9/234 (3%) Query: 144 ASSYKFKGFLL--SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSID 201 A +Y FKG + L Q+ G + +V++ G V Q A QL+ G Sbjct: 20 AINYIFKGKISKNDLFEQLMESGPGSLLIVLITGVAAGTVFNIQVASQLTSMGVSSEIGG 79 Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261 L+++ RE+ LLTA ++ G+ +A A++G+MK+ E+I+AI + + ++ L+ PR+ Sbjct: 80 LLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTEQIEAITMLRTEPIQYLVVPRLL 139 Query: 262 ALIISLPLLTILANFSAIIGASIVIWK--YYDIPFAVFFSRFHS---TATLANIFTGLIK 316 ++II P+ +L F ++ S IW +Y++P +VF++ S + + +++ + +IK Sbjct: 140 SMIIMSPIQCLL--FLSVALWSGQIWSTIFYNVPPSVFWTSVRSGNVSLSSSDLSSMIIK 197 Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + I I+A G +G T VV ++ V ++D + F Sbjct: 198 SVVFGLLISIIACGYGLTTKGGPKEVGTSTTGAVVMTLVTVSLMDVVLTQILFG 251 >gi|326383821|ref|ZP_08205506.1| YrbE family protein [Gordonia neofelifaecis NRRL B-59395] gi|326197585|gb|EGD54774.1| YrbE family protein [Gordonia neofelifaecis NRRL B-59395] Length = 258 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 66/241 (27%), Positives = 118/241 (48%), Gaps = 4/241 (1%) Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG-VSGVPVVILISFVTGAVIAQQGAF 188 H LG + G + +F+ L + Q ++G VS P ++L+ V G IA Sbjct: 10 HTLGFALQAIGSLFVAIARFRLSLSETLNQTVFIGRVSTGPSLLLMIPV-GVFIAVSVGE 68 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 + GA +S +++ + + + L+ A+M+AG +GSAI ++GS KI EEIDA+ MG Sbjct: 69 LAGRIGAGGYSGAVVAFIIVGQASSLVCALMMAGVAGSAICTDLGSRKIREEIDAMEVMG 128 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD-IPFAVFFSRFHSTATL 307 ++ + L++PRI A II +L L + +GA + Y +P F + F + Sbjct: 129 VNILERLVAPRIAAAIIVALVLCSLITVTG-VGACFLYHVYVQHLPAGSFMATFSQYGRM 187 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ L+K+ A IVA +G + + V VV + ++V + +++ + Sbjct: 188 SDFVMALVKSSIFALLATIVACFKGLHARGGPSGVADAVNEAVVIAFALVFVFNTVLSQL 247 Query: 368 Y 368 Y Sbjct: 248 Y 248 >gi|149921452|ref|ZP_01909904.1| ABC-type transport system involved in resistance to organic solvents [Plesiocystis pacifica SIR-1] gi|149817655|gb|EDM77122.1| ABC-type transport system involved in resistance to organic solvents [Plesiocystis pacifica SIR-1] Length = 259 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 46/192 (23%), Positives = 93/192 (48%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I Q G + ++ +++ G ++ Q +FG + + +RE+ ++ Sbjct: 44 ITQFVDAGWGSLALLTMLTAFAGLNLSVQSYASFERFGGQDLLGMFAGVGGVRELYPVMA 103 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV+ R G+ + A + +M+I+E+I+A+ M +D + LISPR+WA+ ++LPLL A+ Sbjct: 104 AVVCGARIGANLAASLANMRISEQIEALEVMAVDPLDYLISPRLWAVTLALPLLCGYADV 163 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 I + D+ F ++ L +I G++K M + ++A G++V Sbjct: 164 VGIAASYAGAVYQLDLDAGSFMTQIQEQVGLVDIGAGMLKGLIMGWLVAVIACFHGYSVS 223 Query: 337 VHSNSLGKKVTT 348 + G ++T Sbjct: 224 KRDGADGVGIST 235 >gi|239945573|ref|ZP_04697510.1| putative YrbE family protein [Streptomyces roseosporus NRRL 15998] gi|239992040|ref|ZP_04712704.1| putative YrbE family protein [Streptomyces roseosporus NRRL 11379] Length = 293 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 59/215 (27%), Positives = 100/215 (46%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I Q ++V + L+S GAVIA Q Q GA+ F+ + +++ L+ Sbjct: 73 IEQFWFVASVTILPAALVSIPFGAVIALQVGSLTQQLGAQSFTGGASVLAVIQQASPLIV 132 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++I+G +GSAI A++GS KI EE+DA+ MG+ ++ L+ PR+ A ++ LL L + Sbjct: 133 ALLISGAAGSAICADLGSRKIREELDAMEVMGVSPIQRLVVPRVLATMLVAVLLNGLISV 192 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 +G D + + F + A L +++ KA GIVA G Sbjct: 193 VGTLGGYFFNVIMQDGTPGAYLASFSALAQLPDLYISEFKALIFGFIAGIVAAYRGLNPR 252 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +G V VV + ++ ++ + Y I Sbjct: 253 GGPKGVGDAVNQSVVITFMLLFFVNMVLTAIYLQI 287 >gi|254512036|ref|ZP_05124103.1| membrane protein [Rhodobacteraceae bacterium KLH11] gi|221535747|gb|EEE38735.1| membrane protein [Rhodobacteraceae bacterium KLH11] Length = 260 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 56/195 (28%), Positives = 101/195 (51%), Gaps = 7/195 (3%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +PVV L + TG +A Q ++F AE +++I +RE+G +L +MIA R S+ Sbjct: 57 LPVVGLTAIFTGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSS 116 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I AEI +MK+ E+IDA+ T+ ++ L +PR+ A +I++P+L + + I G V Sbjct: 117 IAAEIATMKVTEQIDALVTLSTHPMKYLTAPRVLAALITVPVLVGVGDIIGIAGGYTVAT 176 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV- 346 + A + + +I + L+K A G++A G G++S + V Sbjct: 177 QNLGFNPAAYLKNTVDFLEMRDIVSSLVK----GAAFGVIAAIMGCYYGMNSGRGAQGVG 232 Query: 347 --TTCVVQSISIVII 359 T V++ +++I+ Sbjct: 233 RATKGSVEAAAVLIL 247 >gi|86137545|ref|ZP_01056122.1| membrane protein [Roseobacter sp. MED193] gi|85825880|gb|EAQ46078.1| membrane protein [Roseobacter sp. MED193] Length = 260 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 74/125 (59%), Gaps = 10/125 (8%) Query: 156 LIRQMYY----------VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 ++R YY +G +PVV L + TG +A Q ++F AE +++I Sbjct: 35 MLRPPYYPRELALSLLQIGWLSLPVVALTAVFTGGALALQIYAGGARFNAEAVVPQIVAI 94 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 +RE+G +L +MIA R S+I AEI +MK+ E+IDA+ T+ + ++ L++PR+ A ++ Sbjct: 95 GMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQIDALVTLSTNPMQYLVAPRVLAALL 154 Query: 266 SLPLL 270 ++P+L Sbjct: 155 TVPVL 159 >gi|297190651|ref|ZP_06908049.1| ABC-transporter integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] gi|197719878|gb|EDY63786.1| ABC-transporter integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] Length = 281 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 64/221 (28%), Positives = 105/221 (47%), Gaps = 4/221 (1%) Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 L I Q ++V + L+S GAVIA Q Q GA+ F+ + +++ Sbjct: 57 LREFIEQFWFVASVTILPAALVSIPFGAVIALQVGSLTQQLGAQSFTGGASVLAVIQQAS 116 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 L+ A++IAG GSAI A++GS KI EE+DA+ MG+ V+ L+ PR+ A ++ LL Sbjct: 117 PLIVALLIAGAGGSAICADLGSRKIREELDAMEVMGVSPVQRLVVPRVLATMLVAVLLNG 176 Query: 273 LANFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330 + + +G VI + P A + + F + A L +++ +KA GIVA Sbjct: 177 MVSVVGTLGGYFFNVIMQ-GGTPGA-YLASFSALAQLPDLYVSELKALIFGFIAGIVAAY 234 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 G +G V VV + ++ ++ + Y I Sbjct: 235 RGLGPRGGPKGVGDAVNQSVVITFMLLFFVNMVLTAIYLQI 275 >gi|84684701|ref|ZP_01012601.1| membrane protein [Maritimibacter alkaliphilus HTCC2654] gi|84667036|gb|EAQ13506.1| membrane protein [Rhodobacterales bacterium HTCC2654] Length = 244 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 23/201 (11%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L R +G +PVV L + TGA +A Q S+ AE +++I +RE+G ++ Sbjct: 29 LARAFLQIGWLSLPVVGLTAVFTGAALALQIYAGGSRISAEAVVPQIVAIGIVRELGPVM 88 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 +MIA R S+I AE+ +MK++E++DA+ T+ D + L +PR+ A ++++P+L L + Sbjct: 89 VGLMIAARVTSSIAAELATMKVSEQVDALTTLSTDPMTYLTAPRVLAGLVTVPILVGLGD 148 Query: 276 FSAIIGASIVI---------------WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320 + G +V W + D P + S T +F G+ A + Sbjct: 149 ILGLFGGFVVATQGLGFNGPSYVTTSWNFLD-PVDIVLSL-----TKGAVFGGI--AVTL 200 Query: 321 ACAIGIVAMKEGFAVGVHSNS 341 AC G+ A + VG+ + S Sbjct: 201 ACHAGLNAGRGAQGVGLATKS 221 >gi|257054442|ref|YP_003132274.1| ABC-type transport system involved in resistance to organic solvents, permease component [Saccharomonospora viridis DSM 43017] gi|256584314|gb|ACU95447.1| ABC-type transport system involved in resistance to organic solvents, permease component [Saccharomonospora viridis DSM 43017] Length = 250 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 55/224 (24%), Positives = 108/224 (48%), Gaps = 4/224 (1%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 ++F+ F I+Q +++ + L++ GAVI+ Q Q GA+ ++ + Sbjct: 23 PFQFREF----IQQAWFIASVTILPTALVAIPFGAVISMQFGSLAKQLGAQSYTGAGSVL 78 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 +++ L+ A+++AG GSAI A+IG+ I EEIDA+ +G+ V+ L+ PR+ A + Sbjct: 79 ATVQQASPLVVALLVAGAGGSAICADIGARTIREEIDAMEVLGVSAVQRLVVPRVLACMF 138 Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325 LL + + ++G D + + F + A L++++ G IKA Sbjct: 139 VALLLNGMVSVIGVLGGYFFNVVLQDGTPGAYLASFSALAQLSDLWIGEIKALIFGFIAA 198 Query: 326 IVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 +VA G +G V VV + ++ +++++ + Y Sbjct: 199 VVAAYRGLNPPPGPKGVGDAVNQSVVITFLLLFVVNTVLTLIYL 242 >gi|291449028|ref|ZP_06588418.1| ABC-transporter integral membrane protein [Streptomyces roseosporus NRRL 15998] gi|291351975|gb|EFE78879.1| ABC-transporter integral membrane protein [Streptomyces roseosporus NRRL 15998] Length = 253 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 59/215 (27%), Positives = 100/215 (46%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I Q ++V + L+S GAVIA Q Q GA+ F+ + +++ L+ Sbjct: 33 IEQFWFVASVTILPAALVSIPFGAVIALQVGSLTQQLGAQSFTGGASVLAVIQQASPLIV 92 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++I+G +GSAI A++GS KI EE+DA+ MG+ ++ L+ PR+ A ++ LL L + Sbjct: 93 ALLISGAAGSAICADLGSRKIREELDAMEVMGVSPIQRLVVPRVLATMLVAVLLNGLISV 152 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 +G D + + F + A L +++ KA GIVA G Sbjct: 153 VGTLGGYFFNVIMQDGTPGAYLASFSALAQLPDLYISEFKALIFGFIAGIVAAYRGLNPR 212 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +G V VV + ++ ++ + Y I Sbjct: 213 GGPKGVGDAVNQSVVITFMLLFFVNMVLTAIYLQI 247 >gi|289641747|ref|ZP_06473905.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] gi|289508391|gb|EFD29332.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] Length = 286 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 44/157 (28%), Positives = 82/157 (52%) Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267 +RE + A+++AG G+A+ A++G+ +I EEIDA+ +G+D +R LI PR+ A+ + Sbjct: 115 VREFAPWINAMVVAGVMGTAMTADLGARRIREEIDAMEVLGVDPIRTLIVPRVLAITLMT 174 Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327 LL ++A ++G + + FF F + AT+ +++ + K IG+V Sbjct: 175 GLLDLVALAFGVLGGYMASVWVLGANSSAFFENFFANATVTDVWASVAKTTIFGLLIGVV 234 Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +G +G+ V VV S + + I + +F Sbjct: 235 CCYKGLHTQGGPIGVGRAVNQAVVISFAAIWIFNYVF 271 >gi|328880858|emb|CCA54097.1| putative ABC-transporter integral membrane protein [Streptomyces venezuelae ATCC 10712] Length = 254 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 10/229 (4%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 ++F+ FL Q ++V + L+S GAVIA Q Q GA+ F+ + Sbjct: 27 PFQFREFL----EQFWFVASVTILPAALVSIPFGAVIALQVGSLTQQLGAQSFTGGASVL 82 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 +++ L+ A++IAG GSAI A++GS KI EE+DA+ MG+ V+ L+ PR+ A + Sbjct: 83 AVIQQASPLIVALLIAGAGGSAICADLGSRKIREELDAMEVMGVSPVQRLVVPRVLATMA 142 Query: 266 SLPLLTILANFSAIIGA---SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322 LL + + +G +I++ P A + S F + A L +++ +KA Sbjct: 143 VAVLLNGMVSVVGTLGGYFFNIILQG--GTPGA-YLSSFSALAQLPDLYISELKALIFGF 199 Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 GIVA G +G V VV + ++ ++ + Y I Sbjct: 200 IAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFFVNMVLTGIYLQI 248 >gi|120401972|ref|YP_951801.1| hypothetical protein Mvan_0957 [Mycobacterium vanbaalenii PYR-1] gi|119954790|gb|ABM11795.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 281 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 54/212 (25%), Positives = 101/212 (47%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 IRQ ++ + V +L++ G ++ Q A Q GA + + +R+ L Sbjct: 61 IRQGAFMAGTAVLPTVLVALPIGVTLSIQFALLAGQVGATSLAGAASGLAVIRQAASLTA 120 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A+++A GSAI A++GS + EE DA+ MG+ +R L+ PR A I+ LT + F Sbjct: 121 AILMAAAVGSAITADLGSRTMREETDAMEVMGVSVIRRLVVPRFAAAIMIGVALTGVVCF 180 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + + + + + F + F S AT ++ L+KA + +V+ ++G A Sbjct: 181 VGFLASYLFNVYFQNGAPGSFVATFASFATTGDMIVALVKAVIFGAIVAVVSCQKGLATQ 240 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + V VV+SI ++++++ + Y Sbjct: 241 GGPTGVANSVNAAVVESILLLMVVNVAISQLY 272 >gi|254462404|ref|ZP_05075820.1| membrane protein [Rhodobacterales bacterium HTCC2083] gi|206678993|gb|EDZ43480.1| membrane protein [Rhodobacteraceae bacterium HTCC2083] Length = 261 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 9/149 (6%) Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 VG +PVV L + TG +A Q ++F AE +++I +RE+G +L +MIA Sbjct: 53 VGWLSLPVVGLTAVFTGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAA 112 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 R S+I AEI +MK+ E+IDA+ T+ ++ L PR+ A +I +P+L + + I+G Sbjct: 113 RVTSSIAAEIATMKVTEQIDALVTLSTHPMQYLTVPRVLAGLICVPVLVGVGDVIGILGG 172 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIF 311 +V + F+ST L N F Sbjct: 173 YLVATGTLE---------FNSTTYLVNTF 192 >gi|116310403|emb|CAH67412.1| OSIGBa0143N19.6 [Oryza sativa Indica Group] Length = 345 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 48/215 (22%), Positives = 106/215 (49%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 +L+ Q+ VG V +L + G Q + ++ G ++++ RE+ + Sbjct: 119 NLLAQLRRVGPGSAGVSLLTAAFVGMAFTIQFVREFTRLGLHRSVGGVLALALSRELSPV 178 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +TAV+ AGR GSA A++G+M+++E+ D +R +G V L+ PR+ A +++LP+LT+++ Sbjct: 179 VTAVVAAGRVGSAFAAKLGTMQVSEQTDTLRVLGAQPVDYLVVPRVVACVLALPVLTLMS 238 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 + ++ + + + ++ ++ + L+K+ I +V+ G Sbjct: 239 FALGLASSAFLADSIFGVSTSIILESARRALRPWDLISSLLKSQVFGAIIAVVSCAWGVT 298 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+ T+ VV S+ + + D + +F Sbjct: 299 THGGAKGVGESTTSAVVVSLVGIFVADFALSCLFF 333 >gi|21220886|ref|NP_626665.1| ABC-transporter integral membrane protein [Streptomyces coelicolor A3(2)] gi|256787958|ref|ZP_05526389.1| ABC-transporter integral membrane protein [Streptomyces lividans TK24] gi|289771845|ref|ZP_06531223.1| ABC-transporter integral membrane protein [Streptomyces lividans TK24] gi|8247037|emb|CAB92895.1| putative ABC-transporter integral membrane protein [Streptomyces coelicolor A3(2)] gi|289702044|gb|EFD69473.1| ABC-transporter integral membrane protein [Streptomyces lividans TK24] Length = 254 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 66/228 (28%), Positives = 109/228 (47%), Gaps = 8/228 (3%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 ++F+ F + Q ++V + L+S GAVIA Q Q GA+ F+ + Sbjct: 27 PFQFREF----VEQFWFVASVTILPAALVSIPFGAVIALQVGSLTEQLGAQSFTGGASVL 82 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 +++ L+ A++IAG GSAI A++GS +I EE+DA+ MG+ V+ L+ PR+ A + Sbjct: 83 AVVQQASPLIVALLIAGAGGSAICADLGSRRIREELDAMEVMGVSPVQRLVVPRVLAAMG 142 Query: 266 SLPLLTILANFSAIIGASI--VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323 LL L + I+G VI + P A + S F + A L +++ +KA Sbjct: 143 VAVLLNGLVSVVGILGGYFFNVIMQ-GGTPGA-YLSSFSALAQLPDLYVSELKALVFGFI 200 Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 GIVA G +G V VV + ++ ++ + Y I Sbjct: 201 AGIVAAYRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMVMTAVYLQI 248 >gi|169628107|ref|YP_001701756.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977] gi|169240074|emb|CAM61102.1| Putative YrbE family protein [Mycobacterium abscessus] Length = 285 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 100/205 (48%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 +RQ + + V VIL++ G ++ Q A Q GA + I +R+ L+ Sbjct: 65 VRQGAFQAGTAVVPVILVTLPIGVTLSIQFALLAGQVGATSLAGAASGIAIIRQAASLVA 124 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++++ GSAI A++GS + EE DA+ MG+ +R L+ PR A I+ LT + F Sbjct: 125 ALLMSAAVGSAITADLGSRTMREETDAMEVMGVSVIRRLVVPRFAAAIMIGIALTGVVCF 184 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 +GA + + + F + F + AT ++ LIKA + +VA ++G + Sbjct: 185 VGFLGAYLFNVYWQNGAPGSFVTTFSAFATPGDMILALIKAVIYGAIVAVVACQKGLSTK 244 Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361 + V VV+SI +++ ++ Sbjct: 245 GGPIGVANSVNAAVVESILLLMTVN 269 >gi|302525560|ref|ZP_07277902.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4] gi|302434455|gb|EFL06271.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4] Length = 267 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 56/202 (27%), Positives = 106/202 (52%), Gaps = 6/202 (2%) Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 L++ GAVIA Q +Q GA+ F+ ++ +++ L+TA+++AG GSA+ A+I Sbjct: 63 LVAIPFGAVIALQLGSLTTQIGAQSFTGAASALAIVQQASPLITALLVAGAGGSAVCADI 122 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA---SIVIWKY 289 G+ KI EEIDA+ +G++ ++ ++ PR+ A I+ LL L + ++G ++V+ Sbjct: 123 GARKIREEIDAMEVLGVNPIQRIVVPRVLAAIVVSVLLNGLVSVVGVLGGYFFNVVL--Q 180 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 P A + + F++ A + +++ IKA G+VA G +G V Sbjct: 181 GGTPGA-YLASFNALAQVPDLWISEIKAFLYGFVAGVVAAFRGLNPAGGPKGVGDAVNQA 239 Query: 350 VVQSISIVIIIDSLFAIFYFAI 371 VV + ++ +I+ + Y + Sbjct: 240 VVITFLLLFLINVVLTAVYLKV 261 >gi|254818557|ref|ZP_05223558.1| hypothetical protein MintA_01474 [Mycobacterium intracellulare ATCC 13950] Length = 289 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 53/205 (25%), Positives = 99/205 (48%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 +RQ ++ + V +L++ G ++ Q A +Q GA + + +R+ L+ Sbjct: 69 VRQGAFMAATAVLPTVLVALPIGVTLSIQFALLANQVGATSLAGAASGLAVIRQAASLVA 128 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV++A GSAI A++GS + EE DA+ MG+ +R L+ PR A I+ LT + F Sbjct: 129 AVLMASAVGSAITADLGSRTMREETDAMEVMGVSVIRRLVVPRFAAAIMVGVALTGITCF 188 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + + + + F + F S AT ++ L+KA + ++A ++G Sbjct: 189 VGFLASYLFNVYFQRGAPGSFVATFSSFATTEDMIVALLKAVIYGAIVAVIACQKGLFTK 248 Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361 + V VV+SI +++I++ Sbjct: 249 GGPAGVANSVNAAVVESILVLMIVN 273 >gi|254451544|ref|ZP_05064981.1| membrane protein [Octadecabacter antarcticus 238] gi|198265950|gb|EDY90220.1| membrane protein [Octadecabacter antarcticus 238] Length = 258 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 17/203 (8%) Query: 156 LIRQMYY----------VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 L+R +Y +G +PVV L +F TG +A Q ++F AE +++I Sbjct: 33 LVRPPFYGREFANALLQIGYLSLPVVGLTAFFTGGALALQIYSGGARFNAEAVVPQIVAI 92 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 +RE+G +L +MIA R S+I AEI +MK+ E+IDA+ T+ ++ L PR+ A + Sbjct: 93 GMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQIDALVTLSTHPMKYLTLPRVLAATL 152 Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK-------AP 318 +P+L + + I G +V + A + ++I + L K A Sbjct: 153 VMPILVGVGDIIGIYGGFLVGTERLGFNAAAYLQNTADFLEPSDIVSSLAKGAVFGFIAA 212 Query: 319 FMACAIGIVAMKEGFAVGVHSNS 341 M C G+ + + VG + S Sbjct: 213 LMGCYYGMNSERGAMGVGRATKS 235 >gi|56697513|ref|YP_167881.1| membrane protein [Ruegeria pomeroyi DSS-3] gi|56679250|gb|AAV95916.1| membrane protein [Ruegeria pomeroyi DSS-3] Length = 260 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 44/125 (35%), Positives = 72/125 (57%), Gaps = 10/125 (8%) Query: 156 LIRQMYY----------VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 ++R YY +G +PVV L + TG +A Q ++F AE +++I Sbjct: 35 ILRPPYYPRELAIALLNIGWLSLPVVGLTAIFTGGALALQIYAGGARFNAEAVVPQIVAI 94 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 +RE+G +L +MIA R S+I AEI +MK+ E+IDA+ T+ ++ L +PR+ A +I Sbjct: 95 GMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQIDALVTLSTHPMKYLTAPRVLAALI 154 Query: 266 SLPLL 270 ++PLL Sbjct: 155 TVPLL 159 >gi|304383590|ref|ZP_07366049.1| ABC superfamily ATP binding cassette transporter permease protein [Prevotella marshii DSM 16973] gi|304335114|gb|EFM01385.1| ABC superfamily ATP binding cassette transporter permease protein [Prevotella marshii DSM 16973] Length = 261 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 67/236 (28%), Positives = 115/236 (48%), Gaps = 22/236 (9%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G A + + FL + +M +GV+ + +V+LISF GAVI Q + F Sbjct: 31 GRAVAKPERMRMFLKRYVAEMSALGVNSIGIVLLISFFIGAVICIQMKLNIQSPWMPRFV 90 Query: 200 IDLMSILQLREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 + REI +L + +++AG+ GS I +E+G+M++ ++IDA+ MG++ Sbjct: 91 TGYTT----REIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALDIMGVNSACY 146 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN----- 309 LI P+I ++ +P L I+++ + I+GA Y S T L + Sbjct: 147 LILPKIIGMVTIMPFLVIISSATGILGA------YATSYIGHVLSPEDLTIGLQHQFNPW 200 Query: 310 -IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++ +IK+ F A I V+ G+ V S +GK T VV S S++I+ +F Sbjct: 201 FVWMSIIKSLFFAFIISSVSSYFGYTVQGGSVEVGKASTDAVVSS-SVLILFSDVF 255 >gi|254773146|ref|ZP_05214662.1| hypothetical protein MaviaA2_00471 [Mycobacterium avium subsp. avium ATCC 25291] Length = 289 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 53/205 (25%), Positives = 99/205 (48%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 +RQ ++ + V +L++ G ++ Q A +Q GA + + +R+ L+ Sbjct: 69 VRQGAFMAATAVLPTVLVALPIGVTLSIQFALLANQVGATSLAGAASGLAVIRQAASLVA 128 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV++A GSAI A++GS + EE DA+ MG+ +R L+ PR A I+ LT + F Sbjct: 129 AVLMASAVGSAITADLGSRTMREETDAMEVMGVSVIRRLVVPRFAAAIMVGVALTGITCF 188 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + + + + F + F S AT ++ L+KA + ++A ++G Sbjct: 189 VGFLASYLFNVYFQRGAPGSFVATFSSFATTEDMIVALLKAVIYGAIVAVIACQKGLFTK 248 Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361 + V VV+SI +++I++ Sbjct: 249 GGPAGVANSVNAAVVESILVLMIVN 273 >gi|254464755|ref|ZP_05078166.1| membrane protein [Rhodobacterales bacterium Y4I] gi|206685663|gb|EDZ46145.1| membrane protein [Rhodobacterales bacterium Y4I] Length = 260 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 43/125 (34%), Positives = 73/125 (58%), Gaps = 10/125 (8%) Query: 156 LIRQMYY----------VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 ++R YY +G +PVV L + TG +A Q ++F AE +++I Sbjct: 35 MLRPPYYPREVLNSLLNIGWLSLPVVGLTAIFTGGALALQIYAGGARFNAEAVVPQIVAI 94 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 +RE+G +L +MIA R S+I AEI +MK+ E+IDA+ T+ ++ L++PR+ A +I Sbjct: 95 GMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQIDALVTLSTHPMKYLVAPRVLAALI 154 Query: 266 SLPLL 270 ++P+L Sbjct: 155 TVPVL 159 >gi|281425287|ref|ZP_06256200.1| hypothetical protein HMPREF0971_02259 [Prevotella oris F0302] gi|299141487|ref|ZP_07034623.1| ABC transporter, permease [Prevotella oris C735] gi|281400580|gb|EFB31411.1| ABC transporter, permease [Prevotella oris F0302] gi|298576823|gb|EFI48693.1| ABC transporter, permease [Prevotella oris C735] Length = 252 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 66/227 (29%), Positives = 112/227 (49%), Gaps = 4/227 (1%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIF 198 G A + + F +++M +GV + +V+LISF GAVI Q + S + Sbjct: 22 GRSIAVPERMRMFFKRYVKEMSQLGVDSIGIVLLISFFIGAVICIQMKVNIQSPWMPRWV 81 Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258 S + L E + +++AG+ GS I +E+G+M++ ++IDA+ MG++ LI P Sbjct: 82 SGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALDIMGVNSANYLILP 141 Query: 259 RIWALIISLPLLTILANFSAIIGA-SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 +I L+ +P L + ++ I+GA S + P + HS I+ +IK+ Sbjct: 142 KILGLVTMMPFLVVFSSALGILGAYSTAYIGHMLSPDDLTLGIQHSFNAWF-IWMSIIKS 200 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 F A I V+ G+ V S +GK T VV S S++I+ +F Sbjct: 201 MFFAFVIASVSSFFGYTVEGGSVEVGKASTDAVVSS-SVLILFSDVF 246 >gi|254797049|ref|YP_003081887.1| ABC transporter permease protein [Neorickettsia risticii str. Illinois] gi|254590296|gb|ACT69658.1| ABC transporter permease protein [Neorickettsia risticii str. Illinois] Length = 250 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 57/221 (25%), Positives = 115/221 (52%), Gaps = 2/221 (0%) Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209 K + L +I+Q++ +G +P+V + GA++A L F ++ +++ R Sbjct: 28 KMYFLEIIKQLFLIGYYSMPIVAFSAVFMGAMLALHTYTGLDLFQSQTMVAQILAKSITR 87 Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 EIG ++ +++AGR S I AEIG+M++ E++D +R++ ++ L+ P+I A +IS P+ Sbjct: 88 EIGPVVVGIVVAGRVASTIAAEIGTMRVTEQVDLLRSLSINVHAYLVLPKIIAALISFPV 147 Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329 L I++ ++G ++ + ++ S + T A++ +G+ KA F V+ Sbjct: 148 LEIISALFGMLGGYLIGTYKFAFSKMLYISDTLTFITYADLMSGMTKAFFFGFITASVSC 207 Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL--FAIFY 368 + +G VT VV S ++++ + L AIF+ Sbjct: 208 FNALRATHGAKGVGIAVTNSVVASFVLILLSNYLITLAIFH 248 >gi|54024947|ref|YP_119189.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54016455|dbj|BAD57825.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 287 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/196 (27%), Positives = 100/196 (51%), Gaps = 5/196 (2%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 ++++ ++ VS +P ILIS G VIA Q GA + + + +++I L Sbjct: 66 AVVQAWFFASVSLLPA-ILISLPMGVVIAVQVGSLTENVGAGSMAGAVGGMGVMQQIAPL 124 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 A+++ G SAI +++G+ I EEIDA+RTMG+D R L++PR+ A+ + P+L +L Sbjct: 125 AAALLVGGAGASAIASDLGARTIREEIDALRTMGIDPHRRLVAPRVVAMTVVAPMLAVLV 184 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 +I+ + +V + ++ F S A++ ++ L K+ + ++A + G Sbjct: 185 ILMSILASFLVASVGQGVAPGSYWLSFGSFASVTDLVICLGKSAVFGYLVAVIASQRGL- 243 Query: 335 VGVHSNSLGKKVTTCV 350 + K V CV Sbjct: 244 ---QAQGGPKGVADCV 256 >gi|256420257|ref|YP_003120910.1| hypothetical protein Cpin_1211 [Chitinophaga pinensis DSM 2588] gi|256035165|gb|ACU58709.1| protein of unknown function DUF140 [Chitinophaga pinensis DSM 2588] Length = 247 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 5/217 (2%) Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ---L 208 F +RQ +G+ + +V++IS G V Q A+QL I + I++ + Sbjct: 29 FWKEFMRQCVDIGIGSLGIVLIISMFMGGVTTLQIAYQL--ISPVIPKSTIAQIVRDTII 86 Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268 E LT +++AG GS I +E+G+M+++E+IDA MG++ LI P+I A II +P Sbjct: 87 LEFAPTLTCIVLAGVVGSKIASELGNMRVSEQIDAQEIMGINTKGYLIMPKILAAIIMIP 146 Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328 L +A F I G + ++ NIF L KA A I V Sbjct: 147 CLIAIAGFLGIWGGQKAGELGGILSAEQYWQGLRQDFRAYNIFFALFKAFVFAFIIASVP 206 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 G+ V + +GK T+ VV + +++ +D L A Sbjct: 207 SYYGYNVQGGALEIGKASTSAVVVTCVLILFMDYLLA 243 >gi|134098920|ref|YP_001104581.1| putative ABC-transporter integral membrane protein [Saccharopolyspora erythraea NRRL 2338] gi|133911543|emb|CAM01656.1| putative ABC-transporter integral membrane protein [Saccharopolyspora erythraea NRRL 2338] Length = 243 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 58/224 (25%), Positives = 108/224 (48%), Gaps = 4/224 (1%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 ++F+ F ++Q +++ + IL+S GAVI+ Q +Q GA+ F+ + Sbjct: 16 PFQFREF----VQQFWFIASVSITPAILVSIPFGAVISLQLGTLTAQIGAKSFNGAASVL 71 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 +++ ++T ++IAG GSAI A++GS I EEI A+ +G+ V+ LI PR+ A ++ Sbjct: 72 AVVQQASPIVTTLVIAGAGGSAICADLGSRTIREEIAAMEVLGVSPVQRLIVPRVLAAVL 131 Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325 + LL L + + G D + + F++ A L +++ KA G Sbjct: 132 TAMLLNGLVSVVGVAGGYFFNVIVQDGTPGAYLASFNALAQLPDLWVSTFKALIFGFLAG 191 Query: 326 IVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 +VA G S +G V VV + ++ ++++ Y Sbjct: 192 VVAAYRGLNPRGGSKGVGDVVNQSVVITFLLLFFVNTVITALYL 235 >gi|188995184|ref|YP_001929436.1| hypothetical protein PGN_1320 [Porphyromonas gingivalis ATCC 33277] gi|188594864|dbj|BAG33839.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC 33277] Length = 217 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 101/184 (54%), Gaps = 9/184 (4%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL- 214 LI+++ +GV V +VI+ISF GAVI Q + ++ F+I + REI +L Sbjct: 33 LIKEIDKLGVDSVWIVIIISFFIGAVITIQLSLNMTSPLIPRFTIGYST----REIILLE 88 Query: 215 ----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 + +++AG+ GS+I +E+G+M++ E+IDA+ +G++ LI P+I ++ +P+L Sbjct: 89 FSSTVMCLILAGKVGSSIASELGTMRVTEQIDAMEVIGVNSANYLILPKIIGFMLFVPVL 148 Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330 +I++ + I+G + ++P + F + N+F +IK+ A I VA Sbjct: 149 SIISMSTGIVGGYLACSLVPNLPRSDFEYGLQLFFSPYNVFYSIIKSVAYAFIISSVAGY 208 Query: 331 EGFA 334 G+ Sbjct: 209 YGYT 212 >gi|317504956|ref|ZP_07962905.1| ABC superfamily ATP binding cassette transporter permease protein [Prevotella salivae DSM 15606] gi|315663948|gb|EFV03666.1| ABC superfamily ATP binding cassette transporter permease protein [Prevotella salivae DSM 15606] Length = 252 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 64/219 (29%), Positives = 110/219 (50%), Gaps = 4/219 (1%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSIL 206 + + F ++M +GV + +V+LISF GAVI Q + S + S + Sbjct: 30 RMRMFFKRYTKEMSQLGVDSIGIVLLISFFIGAVICIQMKVNIQSPWMPRWVSGYTTREI 89 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 L E + +++AG+ GS I +E+G+M++ ++IDA+ MG++ LI P+I L+ Sbjct: 90 MLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALDIMGVNSANYLILPKILGLVTM 149 Query: 267 LPLLTILANFSAIIGA-SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325 +P L I ++ I+GA S + P + HS + I+ ++K+ F A I Sbjct: 150 MPFLVIFSSALGILGAYSTAYIGHLLTPDDLTLGIQHSFNSWF-IWMSILKSMFFAFIIA 208 Query: 326 IVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 V+ G+ V S +GK T VV S S++I+ +F Sbjct: 209 SVSSYFGYTVEGGSVEVGKASTDAVVSS-SVLILFSDVF 246 >gi|114564855|ref|YP_752369.1| hypothetical protein Sfri_3703 [Shewanella frigidimarina NCIMB 400] gi|114336148|gb|ABI73530.1| protein of unknown function DUF140 [Shewanella frigidimarina NCIMB 400] Length = 264 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 75/120 (62%), Gaps = 8/120 (6%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM----SILQLREI 211 +I+Q+Y++G + V+I+ + TG V+A Q L +FG S+DL+ ++ ++E+ Sbjct: 46 VIKQIYFIGNRSLIVIIVAALFTGMVVALQFYDTLVRFG----SVDLLGSAVALSLIKEL 101 Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271 G ++TA+M+ R GSA +EIG M+ ++ DA+ M ++ R ++ PR+ A + +P+LT Sbjct: 102 GPVMTALMVIARVGSATCSEIGIMRNEQQFDALDCMAINSYRYVMLPRLLAALFCVPMLT 161 >gi|118619035|ref|YP_907367.1| YrbE family protein, YrbE5A [Mycobacterium ulcerans Agy99] gi|118571145|gb|ABL05896.1| YrbE family protein, YrbE5A [Mycobacterium ulcerans Agy99] Length = 289 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 98/205 (47%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 +RQ ++ + V IL+S ++ Q A Q GA + + +R+ L+ Sbjct: 69 VRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGATSLAGAASGLAVIRQGASLVA 128 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV++A GSAI A++GS + EE DA+ MGL +R L+ PR A I+ LT + F Sbjct: 129 AVLMASAVGSAITADLGSRTMREETDAMEVMGLSVIRRLVVPRFAAAIMIGVALTGVVCF 188 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + + + + F + F S AT ++F L KA + +V+ ++G + Sbjct: 189 VGFFASYMFNVYFQNGAPGSFVATFASFATTDDMFLALFKAVMFGAIVAVVSAQKGLSTK 248 Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361 + V VV+SI +++I++ Sbjct: 249 GGPTGVANSVNAAVVESILVLMIVN 273 >gi|324997538|ref|ZP_08118650.1| hypothetical protein PseP1_02178 [Pseudonocardia sp. P1] Length = 246 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/144 (31%), Positives = 77/144 (53%), Gaps = 1/144 (0%) Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267 +RE + A+++AG G+A+ A++G+ +I EEIDA+ +G+D VR LI PRI A+ I Sbjct: 76 VREFAPWINAMVVAGVVGTAMTADLGARRIREEIDAMEVLGIDPVRALILPRIIAVTIMT 135 Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327 L+ ++A ++G + + D A F F S AT +++ ++K IG+V Sbjct: 136 GLMDLIALSFGVLGGYLAAIQ-LDAGSAAFQQNFFSNATTIDLWGSVLKTTLFGLIIGVV 194 Query: 328 AMKEGFAVGVHSNSLGKKVTTCVV 351 +GF +G+ V VV Sbjct: 195 CCYKGFRAQGGPAGVGRAVNQAVV 218 >gi|326775351|ref|ZP_08234616.1| protein of unknown function DUF140 [Streptomyces cf. griseus XylebKG-1] gi|326655684|gb|EGE40530.1| protein of unknown function DUF140 [Streptomyces cf. griseus XylebKG-1] Length = 290 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 58/215 (26%), Positives = 100/215 (46%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I Q ++V + L+S GAVIA Q Q GA+ F+ + +++ ++ Sbjct: 70 IEQFWFVASVTILPAALVSIPFGAVIALQVGSLTQQLGAQSFTGGASVLAVIQQASPIIV 129 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++I+G +GSAI A++GS KI EE+DA+ MG+ ++ L+ PR+ A ++ LL L + Sbjct: 130 ALLISGAAGSAICADLGSRKIREELDAMEVMGVSPIQRLVVPRVLATMLVAVLLNGLISV 189 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 +G D + + F + A L +++ KA GIVA G Sbjct: 190 VGTLGGYFFNVIMQDGTPGAYLASFSALAQLPDLYISEFKALIFGFIAGIVAAYRGLNPR 249 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +G V VV + ++ ++ + Y I Sbjct: 250 GGPKGVGDAVNQSVVITFMLLFFVNMVLTAIYLQI 284 >gi|311744213|ref|ZP_07718017.1| ABC superfamily ATP binding cassette transporter, membrane protein [Aeromicrobium marinum DSM 15272] gi|311312386|gb|EFQ82299.1| ABC superfamily ATP binding cassette transporter, membrane protein [Aeromicrobium marinum DSM 15272] Length = 257 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 62/216 (28%), Positives = 109/216 (50%), Gaps = 2/216 (0%) Query: 157 IRQMYYV-GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 + Q +++ V+ VP IL+S GA+IA Q Q GA+ F+ + +RE + Sbjct: 37 VEQAWFITSVTLVPT-ILVSIPFGAIIALQVGSLTGQLGAQSFAGATAVLATVREAAPIA 95 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++IAG +GSAI +++G+ KI EEIDA+ +G+D + L+ PR A + L+ + Sbjct: 96 AALVIAGAAGSAICSDLGARKIREEIDAMEVLGIDPLARLVVPRALATVAVALLINGIVI 155 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 + I G F S F + ATL +++ ++KA IVA +G Sbjct: 156 TAGIAGGYFFTVVVQGGSAGAFLSSFAALATLPDVYVAMVKAAVFGFLTAIVAANKGLTA 215 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 G + +G+ V V+ + ++ +++++ YF I Sbjct: 216 GGGPSGVGRAVNEAVILAFMLLFLLNAIITALYFQI 251 >gi|182434833|ref|YP_001822552.1| putative YrbE family protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|178463349|dbj|BAG17869.1| putative YrbE family protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 290 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 58/215 (26%), Positives = 100/215 (46%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I Q ++V + L+S GAVIA Q Q GA+ F+ + +++ ++ Sbjct: 70 IEQFWFVASVTILPAALVSIPFGAVIALQVGSLTQQLGAQSFTGGASVLAVIQQASPIIV 129 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++I+G +GSAI A++GS KI EE+DA+ MG+ ++ L+ PR+ A ++ LL L + Sbjct: 130 ALLISGAAGSAICADLGSRKIREELDAMEVMGVSPIQRLVVPRVLATMLVAVLLNGLISV 189 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 +G D + + F + A L +++ KA GIVA G Sbjct: 190 VGTLGGYFFNVIMQDGTPGAYLASFSALAQLPDLYISEFKALIFGFIAGIVAAYRGLNPR 249 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +G V VV + ++ ++ + Y I Sbjct: 250 GGPKGVGDAVNQSVVITFMLLFFVNMVLTAIYLQI 284 >gi|325104961|ref|YP_004274615.1| protein of unknown function DUF140 [Pedobacter saltans DSM 12145] gi|324973809|gb|ADY52793.1| protein of unknown function DUF140 [Pedobacter saltans DSM 12145] Length = 244 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 45/136 (33%), Positives = 81/136 (59%), Gaps = 1/136 (0%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSIL 206 KF + + ++M Y+G+ + ++ +IS GAV+ Q AFQL S F + + Sbjct: 22 KFSLYWKEIAKEMVYIGIGSLALISIISVFVGAVMTLQIAFQLVSDFIPKTIVGSVNRDS 81 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 + E+ + A+++AG+ GS+I +EIG+M++ E+IDA+ MG++ LI P+I A I Sbjct: 82 AILELSPTICALVLAGKIGSSISSEIGTMRVTEQIDALEIMGINAPGYLILPKIIAGITM 141 Query: 267 LPLLTILANFSAIIGA 282 +P+L ++ F A++G Sbjct: 142 IPILVYISIFLALLGG 157 >gi|84494808|ref|ZP_00993927.1| putative ABC transporter integral membrane protein [Janibacter sp. HTCC2649] gi|84384301|gb|EAQ00181.1| putative ABC transporter integral membrane protein [Janibacter sp. HTCC2649] Length = 276 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/199 (26%), Positives = 94/199 (47%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V+ ++F TG+ + QG L+Q G F+ L + L REI L+ + +A G Sbjct: 65 VGVLTFMAFFTGSQVGLQGYSSLNQLGTGAFAGFLAAYLNTREIAPLVAGLSLAATVGCG 124 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 A++G+M+I+EE+DA+ MG+ + L++ R+ A I++ L ++ S+ ++ Sbjct: 125 FTAQLGAMRISEEVDALEVMGIPSLPFLVTTRMIAGFIAVIPLYVIGLLSSYAATRFIVT 184 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 Y+ + FH +IF +K A I ++ G+ +G V Sbjct: 185 DYFGQSKGTYDHYFHLFLPPIDIFYSFLKVLVFAVIIILIHCYYGYTASGGPAGVGVAVG 244 Query: 348 TCVVQSISIVIIIDSLFAI 366 V SI V ++D F++ Sbjct: 245 KAVRTSIVAVNLVDFFFSL 263 >gi|288924563|ref|ZP_06418500.1| ABC transporter, permease [Prevotella buccae D17] gi|315607425|ref|ZP_07882421.1| ABC superfamily ATP binding cassette transporter permease protein [Prevotella buccae ATCC 33574] gi|288338350|gb|EFC76699.1| ABC transporter, permease [Prevotella buccae D17] gi|315250857|gb|EFU30850.1| ABC superfamily ATP binding cassette transporter permease protein [Prevotella buccae ATCC 33574] Length = 248 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 112/219 (51%), Gaps = 4/219 (1%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSIL 206 + + F+ +++M +GV + +V+LISF GAVI Q + S + S + Sbjct: 26 RMRMFMKRYVKEMSQLGVDSIGIVLLISFFIGAVICIQMKLNIQSPWMPRWVSGYTTREI 85 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 L E + +++AG+ GS I +E+G+M++ ++IDA+ MG++ LI P+I L+ Sbjct: 86 MLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALDIMGVNSAGYLILPKILGLVTI 145 Query: 267 LPLLTILANFSAIIGASIVIWKYYDI-PFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325 +P L I ++ IIGA + + + P + HS ++ +IK+ F A I Sbjct: 146 MPFLVIFSSAMGIIGAYATAYVGHILSPDDLTLGLQHSFNAWF-VWMSIIKSLFFAFIIA 204 Query: 326 IVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 V+ G+ V S +G+ T VV S S++I+ +F Sbjct: 205 SVSSYFGYTVEGGSVEVGESSTDAVVCS-SVLILFSDVF 242 >gi|163732016|ref|ZP_02139462.1| hypothetical protein RLO149_01157 [Roseobacter litoralis Och 149] gi|161394314|gb|EDQ18637.1| hypothetical protein RLO149_01157 [Roseobacter litoralis Och 149] Length = 256 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/114 (35%), Positives = 68/114 (59%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + Q+ +G +PVV L + TG +A Q S+F AE ++++ +RE+G +L Sbjct: 42 VTQLVNIGWLSLPVVGLTALFTGGALALQIYAGGSRFNAESVVPQIVAVGMVRELGPVLV 101 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 +MIA R S+I AEI +MK+ E+IDA+ T+ ++ L PR+ A ++ +PLL Sbjct: 102 GLMIAARVTSSIAAEIATMKVTEQIDALVTLSTHPMKYLTVPRVLAAVLVVPLL 155 >gi|41406190|ref|NP_959026.1| hypothetical protein MAP0092 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394538|gb|AAS02409.1| hypothetical protein MAP_0092 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 289 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 53/205 (25%), Positives = 98/205 (47%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 +RQ ++ + V +L++ G ++ Q A +Q GA + + +R+ L+ Sbjct: 69 VRQGAFMAATAVLPTVLVALPIGVTLSIQFALLANQVGATSLAGAASGLAVIRQAASLVA 128 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV+ A GSAI A++GS + EE DA+ MG+ +R L+ PR A I+ LT + F Sbjct: 129 AVLTASAVGSAITADLGSRTMREETDAMEVMGVSVIRRLVVPRFAAAIMVGVALTGITCF 188 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + + + + F + F S AT ++ L+KA + ++A ++G Sbjct: 189 VGFLASYLFNVYFQRGAPGSFVATFSSFATTEDMIVALLKAVIYGAIVAVIACQKGLFTK 248 Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361 + V VV+SI +++I++ Sbjct: 249 GGPAGVANSVNAAVVESILVLMIVN 273 >gi|239982859|ref|ZP_04705383.1| ABC-transporter integral membrane protein [Streptomyces albus J1074] gi|291454702|ref|ZP_06594092.1| ABC-transporter integral membrane protein [Streptomyces albus J1074] gi|291357651|gb|EFE84553.1| ABC-transporter integral membrane protein [Streptomyces albus J1074] Length = 254 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 63/229 (27%), Positives = 109/229 (47%), Gaps = 10/229 (4%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 ++F+ F + Q +++ + L+S GAVIA Q Q GA+ F+ + Sbjct: 27 PFQFREF----VEQFWFIASVTILPAALVSIPFGAVIALQVGSLTQQLGAQSFTGGASVL 82 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 +++ L+ A++IAG GSAI A++GS KI EE+DA+ MG+ V+ L+ PR+ A + Sbjct: 83 AVIQQASPLIVALLIAGAGGSAICADLGSRKIREELDAMEVMGVSPVQRLVVPRVLATMS 142 Query: 266 SLPLLTILANFSAIIGA---SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322 LL + + +G +I++ P A + S F + A L +++ +KA Sbjct: 143 VAVLLNGMVSVVGTLGGYFFNIILQG--GTPGA-YLSSFSALAQLPDLYISELKALIFGF 199 Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 GIVA G +G V VV + ++ ++ + Y I Sbjct: 200 IAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFFVNMVMTGLYLQI 248 >gi|119386398|ref|YP_917453.1| hypothetical protein Pden_3690 [Paracoccus denitrificans PD1222] gi|119376993|gb|ABL71757.1| protein of unknown function DUF140 [Paracoccus denitrificans PD1222] Length = 252 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 52/162 (32%), Positives = 90/162 (55%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L RQ+ +G +PVV L + TGA +A Q +F A +++I RE+G +L Sbjct: 39 LARQVVQIGWLSLPVVGLTALFTGAALALQIHSGGERFQAGDVVPAIVAIGMARELGPVL 98 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 +M+A R SAI AE+G+M++ E+IDA+ T+ D V L+SPR+WA ++ +P+L + + Sbjct: 99 GGLMVAARVASAIAAELGTMRVTEQIDALVTLSTDPVGWLVSPRLWAALLCVPMLVGVGD 158 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 I+G ++ A++ S + ++ +GL+K Sbjct: 159 VIGIMGGWLIGVNALGFNSAIYLSNSWAYLESWDVVSGLLKG 200 >gi|260910011|ref|ZP_05916695.1| ABC superfamily ATP binding cassette transporter, permease protein [Prevotella sp. oral taxon 472 str. F0295] gi|260635870|gb|EEX53876.1| ABC superfamily ATP binding cassette transporter, permease protein [Prevotella sp. oral taxon 472 str. F0295] Length = 248 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 62/219 (28%), Positives = 110/219 (50%), Gaps = 4/219 (1%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSIL 206 + + F +++M +GV V +V+LISF GAVI Q + S + S + Sbjct: 26 RMRMFFKRYVKEMSQLGVDSVGIVLLISFFIGAVICIQMKLNIQSPWMPRWVSGYTTREI 85 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 L E + +++AG+ GS I +E+G+M++ ++IDA+ MG++ LI P++ L+ Sbjct: 86 MLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALDIMGVNSASYLILPKVLGLVTI 145 Query: 267 LPLLTILANFSAIIGASIVIW-KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325 +P L I ++ I+GA + + P + HS ++ ++K+ F A I Sbjct: 146 MPFLVIFSSAMGILGAYATAYIGHILTPDDLTLGIQHSFNPWF-MWMSIVKSLFFAYIIA 204 Query: 326 IVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 V+ G+ V S +GK T VV S S++I+ +F Sbjct: 205 SVSSYFGYTVEGGSVEVGKASTDAVVSS-SVLILFSDVF 242 >gi|84502659|ref|ZP_01000778.1| membrane protein [Oceanicola batsensis HTCC2597] gi|84389054|gb|EAQ01852.1| membrane protein [Oceanicola batsensis HTCC2597] Length = 258 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 7/195 (3%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +PVV L + TG +A Q S+F AE +++I +RE+G +L +MIA R S+ Sbjct: 55 LPVVGLTAVFTGGALALQIYAGGSRFDAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSS 114 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I AEI +MK+ E+IDA+ T+ ++ L PR+ A ++++PLL + + I G V Sbjct: 115 IAAEIATMKVTEQIDALVTLSTHPMKYLTVPRVLAGLVTVPLLVGVGDIIGIFGGYQVAV 174 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV- 346 + A + ++ + L+K A G++A G G++S + V Sbjct: 175 RSLGFNPATYLQNTVDFLEPLDVLSSLVK----GAAFGVIATLMGCYSGMNSGRGAQGVG 230 Query: 347 --TTCVVQSISIVII 359 T V++ S++I+ Sbjct: 231 AATKSSVEAASVLIL 245 >gi|288930100|ref|ZP_06423938.1| ABC transporter, permease [Prevotella sp. oral taxon 317 str. F0108] gi|288328573|gb|EFC67166.1| ABC transporter, permease [Prevotella sp. oral taxon 317 str. F0108] Length = 248 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 64/237 (27%), Positives = 110/237 (46%), Gaps = 40/237 (16%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSIL 206 + + F +++M +GV V +V+LISF GAVI Q + S + S + Sbjct: 26 RMRMFFKRYVKEMSQLGVDSVGIVLLISFFIGAVICIQMKLNIQSPWMPRWVSGYTTREI 85 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 L E + +++AG+ GS I +E+G+M++ ++IDA+ MG++ LI P+I L+ Sbjct: 86 MLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALDIMGVNSASYLILPKILGLVTI 145 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT-------------- 312 +P L I ++ I+GA ++TA + +I T Sbjct: 146 MPFLVIFSSAMGILGA-------------------YATAYIGHILTPDDLTLGIQHAFKP 186 Query: 313 -----GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++K+ F A I V+ G+ V S +GK T VV S S++I+ +F Sbjct: 187 WFMWMSIVKSLFFAYIIASVSSYFGYTVEGGSVEVGKASTDAVVSS-SVLILFSDVF 242 >gi|325281943|ref|YP_004254485.1| hypothetical protein Odosp_3346 [Odoribacter splanchnicus DSM 20712] gi|324313752|gb|ADY34305.1| protein of unknown function DUF140 [Odoribacter splanchnicus DSM 20712] Length = 245 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 60/202 (29%), Positives = 104/202 (51%), Gaps = 2/202 (0%) Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIA 221 +G++ + +V++ISF GAV+ Q A+ + + I ++ L E + ++++A Sbjct: 38 LGLNSIVLVVIISFFIGAVLTLQTAYNMQSPLLPRYLIGYLTRETMLLEFSSTIVSLILA 97 Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281 G+ GS I +EIGSM+I E+I+A+ TMG++ V L+ P+I A ++ P+L I + F I+G Sbjct: 98 GKIGSNIASEIGSMRITEQIEALETMGVNSVSYLVGPKILASLVINPILYIFSVFIGILG 157 Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341 I + F F H + + ++K F A + G+ V + Sbjct: 158 GIISGLISGVVNFEDFVYGLHFSFNPYYVTYSIVKTLFFAFIFTSIPAFYGYYVQGGARE 217 Query: 342 LGKKVTTCVVQSISIVIIIDSL 363 +GK T VV S SI I+ +L Sbjct: 218 VGKAGTKAVVDS-SIAILTANL 238 >gi|294632699|ref|ZP_06711258.1| YrbE family protein [Streptomyces sp. e14] gi|292830480|gb|EFF88830.1| YrbE family protein [Streptomyces sp. e14] Length = 254 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 58/180 (32%), Positives = 88/180 (48%), Gaps = 2/180 (1%) Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 L+S GAVIA Q Q GA+ F+ + +++ L+ A++I+G GSAI A++ Sbjct: 50 LVSIPFGAVIALQVGSLTQQLGAQSFTGGASVLAVVQQASPLIVALLISGAGGSAICADL 109 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV-IWKYYD 291 GS I EE+DA+ MG+ V+ L+ PR+ A + LL L + I+G ++ + Sbjct: 110 GSRTIREELDAMEVMGVSPVQRLVVPRVLAAMGVAVLLNGLVSVVGILGGYFFNVYLQHG 169 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 P A + S F S A L +++ KA GIVA G +G V VV Sbjct: 170 TPGA-YVSSFSSLAQLPDLYVSEFKALVFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVV 228 >gi|282897686|ref|ZP_06305685.1| Protein of unknown function DUF140 [Raphidiopsis brookii D9] gi|281197365|gb|EFA72262.1| Protein of unknown function DUF140 [Raphidiopsis brookii D9] Length = 241 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 60/211 (28%), Positives = 101/211 (47%) Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 VG + V+L+S G + Q A +L +FGA ++ RE+ LLTA +IAG Sbjct: 31 VGPGSLSPVLLVSGFAGMIFTIQTARELVRFGAVDNLGGAFAVAFCRELAPLLTASVIAG 90 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 ++GSA AEIG+M++ E+IDA+ + D + L+ PR+ A + +P++ I A + G Sbjct: 91 QAGSAFAAEIGAMQVTEQIDALYLLKTDPIDYLVLPRVIACGLMMPVMMIFALIIGVSGG 150 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 ++Y I F T ++ +IK + + G + + Sbjct: 151 IFAGLEFYQIQPENFLESVRDFLTPGDMMMIIIKGVIFGIIVAVNGCSWGLTTRGGAKEV 210 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 G+ TT VV + ++ I D L A+ +GI Sbjct: 211 GESATTAVVTTWVVLFITDFLLALPGITVGI 241 >gi|296138972|ref|YP_003646215.1| hypothetical protein Tpau_1245 [Tsukamurella paurometabola DSM 20162] gi|296027106|gb|ADG77876.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM 20162] Length = 287 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 2/205 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 R VG PV+ ++ GA++A QG L+ G + S RE LL Sbjct: 66 RGALVVGGGTAPVLAVLGITVGAIVAVQGFAILNMLGMGPLTAVAASFANTREFAPLLAG 125 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPLLTILANF 276 V A ++G + AEIG+M+INEEIDA+ ++GL V +++ R+ A LI +P+ I Sbjct: 126 VGFAAQAGCRMTAEIGAMRINEEIDALESLGLRSVSFVVTTRVLAGLIAVIPVYLITLIL 185 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 S + A +V Y +P + F + ++I +IK A+ I+ +GF Sbjct: 186 SWLSCAWMVT-SVYGMPTGTYQHYFSQFVSASDIIFSVIKVAVFLVAVIIIHCYQGFFAS 244 Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361 +G + S+ V+I++ Sbjct: 245 GGPEGVGTASGRAIRASLVAVVILN 269 >gi|261415551|ref|YP_003249234.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372007|gb|ACX74752.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 292 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 49/163 (30%), Positives = 89/163 (54%), Gaps = 7/163 (4%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 ++ L + S+ FK ++I Q ++ GV P + ++ + G V+ + Sbjct: 32 GQLIALFLRTVASLFDKSHNFKSDSRNIILQTFFTGVEIFPPLFAVATLFGTVVI---IY 88 Query: 189 QLSQFGAEIFSID---LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 S G FS + L+ ++ +RE+ + TA +IAGR+GS++ IGSM IN E+DA+ Sbjct: 89 LFSLMGKMGFSNNIGFLIVVIIIRELSPIFTAFLIAGRTGSSLTTYIGSMVINSEVDALA 148 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 TMG++ +R L+ P + I++ ++ I+ + SA IGA ++ K Sbjct: 149 TMGINPIRYLVMPSVIGGTIAMIIMNIIFSTSA-IGAGFLLTK 190 >gi|332107650|gb|EGJ08874.1| hypothetical protein RBXJA2T_01025 [Rubrivivax benzoatilyticus JA2] Length = 260 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 59/217 (27%), Positives = 110/217 (50%), Gaps = 3/217 (1%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVL 214 ++ Q++ +G + +++ G V+A Q + L +GA S+ L+ L L RE+G + Sbjct: 43 VVAQIHAIGNRSLVIILASGMAVGFVLALQMYYALVTYGAA-ESLGLVVNLSLVRELGPV 101 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 + A++ AGR+G+++ AEIG MK E++ A+ M +D +++PR IIS+PLL L Sbjct: 102 VAALLFAGRAGTSLTAEIGLMKAGEQLAAMELMAIDPRSRVLAPRFLGGIISMPLLAALF 161 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGF 333 + I+GA +V + F+S S+ + ++ G++K+ VA+ +G+ Sbjct: 162 SAIGILGAWVVAVLLIGVDAGNFWSIMQSSVDVWRDVGNGIVKSFVFGVICTAVALYQGY 221 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + T VV + V+ +D L F+ Sbjct: 222 ETQATPEGVAHATTRTVVIASLAVLAMDFLLTALMFS 258 >gi|294672817|ref|YP_003573433.1| hypothetical protein PRU_0026 [Prevotella ruminicola 23] gi|294473166|gb|ADE82555.1| putative membrane protein [Prevotella ruminicola 23] Length = 251 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 62/226 (27%), Positives = 112/226 (49%), Gaps = 2/226 (0%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIF 198 G + + + FL I +M +G++ + +V++ISF GAVI Q + S + Sbjct: 21 GRVFSRPERMRMFLKQYITEMTQLGINSIGIVLIISFFIGAVICIQMKLNIQSPWMPRWV 80 Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258 + + L E + +++AG+ GS I +E+G+M++ ++IDA+ MG++ LI P Sbjct: 81 AGYTTREILLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGINSACYLILP 140 Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318 +I L+ +P L I ++ + IIGA + + I + ++ +IK+ Sbjct: 141 KIIGLLTIMPFLVIFSSATGIIGAYGTAYIGHIIAPDDLTAGLQHAFIPWFVWMSIIKSQ 200 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 F A I V G+ V S ++GK T VV S S++I+ +F Sbjct: 201 FFAFIISSVPAFCGYTVEGGSVNVGKASTDAVVTS-SVLILFSDVF 245 >gi|330996070|ref|ZP_08319964.1| hypothetical protein HMPREF9442_01039 [Paraprevotella xylaniphila YIT 11841] gi|329574067|gb|EGG55645.1| hypothetical protein HMPREF9442_01039 [Paraprevotella xylaniphila YIT 11841] Length = 248 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 62/230 (26%), Positives = 109/230 (47%), Gaps = 23/230 (10%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 + + F I++M +GV + +V+LISF GAVI Q + F + Sbjct: 26 RMRMFFKQYIKEMSQLGVDSIGIVLLISFFIGAVICIQIKLNIQSPWMPKFVTGYTT--- 82 Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 REI +L + +++AG+ GS I +EIG+M++ ++IDA+ MG++ LI P++ Sbjct: 83 -REIMLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALEIMGVNSANYLILPKVLG 141 Query: 263 LIISLPLLTILANFSAIIGA-------SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 ++ +P L + FS +GA ++ + F+ ++ ++ G I Sbjct: 142 MMTMMPFLVCFSIFSGFVGAYATSIIGQVITMDDLTLGLQHDFNEWY-------VWMGFI 194 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 K+ F A I V+ G+ V S +GK T VV S +++ D L Sbjct: 195 KSIFFAFVITSVSAFYGYTVEGGSVEVGKASTDSVVSSSVLILFSDVLLT 244 >gi|302327111|gb|ADL26312.1| putative ABC transporter, permease protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 262 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 89/164 (54%), Gaps = 7/164 (4%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 ++ L + S+ FK ++I Q ++ GV P + ++ + G V+ Sbjct: 1 MGQLIALFLRTVASLFDKSHNFKSDSRNIILQTFFTGVEIFPPLFAVATLFGTVVI---I 57 Query: 188 FQLSQFGAEIFSID---LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 + S G FS + L+ ++ +RE+ + TA +IAGR+GS++ IGSM IN E+DA+ Sbjct: 58 YLFSLMGKMGFSNNIGFLIVVIIIRELSPIFTAFLIAGRTGSSLTTYIGSMVINSEVDAL 117 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 TMG++ +R L+ P + I++ ++ I+ + SA IGA ++ K Sbjct: 118 ATMGINPIRYLVMPSVIGGTIAMIIMNIIFSTSA-IGAGFLLTK 160 >gi|114766131|ref|ZP_01445135.1| membrane protein [Pelagibaca bermudensis HTCC2601] gi|114541591|gb|EAU44633.1| membrane protein [Roseovarius sp. HTCC2601] Length = 260 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 54/173 (31%), Positives = 86/173 (49%), Gaps = 4/173 (2%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +PVV L + TG +A Q ++F AE +++I +RE+G +L +MIA R S+ Sbjct: 57 LPVVGLTAVFTGGALALQIYSGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSS 116 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I AEI +MK+ E+IDA+ T+ ++ L+ PR+ A +I +PLL + + I G V Sbjct: 117 IAAEIATMKVTEQIDALVTLSTHPMKYLVVPRLLAALIVVPLLVAVGDVIGIFGGYFVAT 176 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 A + +I + L+K CA G +A G G+ S Sbjct: 177 GSLGFNPAAYLENTVDFLEPLDIVSSLVK----GCAFGGIAALMGCFYGMQSG 225 >gi|260433527|ref|ZP_05787498.1| membrane protein [Silicibacter lacuscaerulensis ITI-1157] gi|260417355|gb|EEX10614.1| membrane protein [Silicibacter lacuscaerulensis ITI-1157] Length = 260 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 55/195 (28%), Positives = 99/195 (50%), Gaps = 7/195 (3%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +PVV L + TG +A Q ++F AE +++I +RE+G ++ +MIA R S+ Sbjct: 57 LPVVGLTTIFTGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVMVGLMIAARVTSS 116 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I AEI +MK+ E+IDA+ T+ ++ L +PR+ A +I++P L + + I G V Sbjct: 117 IAAEIATMKVTEQIDALVTLSTHPMKYLTAPRVLAALITVPALVAVGDIIGIAGGYAVAT 176 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV- 346 + A + +I + L+K A G++A G G++S + V Sbjct: 177 QNLGFNPAAYLKNTVDFLEPLDILSSLVK----GAAFGMIAAIMGCYFGMNSGRGAQGVG 232 Query: 347 --TTCVVQSISIVII 359 T V++ +++I+ Sbjct: 233 RATKSSVEAAAVLIL 247 >gi|50261859|gb|AAT72482.1| AT1G19800 [Arabidopsis lyrata subsp. lyrata] Length = 205 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 85/161 (52%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 ++Q+ G + V +L S G Q + ++ G ++++ RE+ ++T Sbjct: 43 LQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFTRLGLNRSIGGVLALAFSRELSPVIT 102 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 ++++AGR GSA AE+G+M+++E+ D +R +G D + LI+PR+ A ++LP LT++ Sbjct: 103 SIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADPIDYLITPRVIASCLALPFLTLMCFT 162 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 + ++++ Y I + H +I + +IK+ Sbjct: 163 VGMASSALLSDAVYGISINIIMDSAHRALRPWDIVSAMIKS 203 >gi|207110315|ref|ZP_03244477.1| hypothetical protein HpylH_14585 [Helicobacter pylori HPKX_438_CA4C1] Length = 113 Score = 70.1 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 39/110 (35%), Positives = 59/110 (53%) Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H T + G+ Sbjct: 2 LVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLHDTVGWNHFLVGI 61 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +KAPF AI +V GF V + S+G+ T VV ++ +I +D+ F Sbjct: 62 VKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDACF 111 >gi|289642565|ref|ZP_06474708.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] gi|289507653|gb|EFD28609.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] Length = 286 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 45/153 (29%), Positives = 78/153 (50%) Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268 REI T + +AG G+A+ A++G+ +I EE+DA++ +GLD +R+L+ PR+ A+ + Sbjct: 116 REISPFCTGMAVAGVMGTALTADLGARRIREELDAMKVLGLDAMRVLVLPRVIAITVMTA 175 Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328 I+ + A I D FFS F S T+ ++ ++K + IGIV Sbjct: 176 AFNIVGVAVGVAMAMISGTVIGDTSAGSFFSVFLSNVTVPDLVGTVVKTVLIGFFIGIVC 235 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 ++G +G+ V VV + V +I+ Sbjct: 236 AQKGLNARGGPEGVGRAVNEAVVLCFAAVWVIN 268 >gi|313204340|ref|YP_004042997.1| hypothetical protein Palpr_1873 [Paludibacter propionicigenes WB4] gi|312443656|gb|ADQ80012.1| protein of unknown function DUF140 [Paludibacter propionicigenes WB4] Length = 246 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 52/191 (27%), Positives = 95/191 (49%), Gaps = 22/191 (11%) Query: 135 VISNTGEFC-------ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +++NTG++ A ++K F +++ +G+ +P+V +IS G ++ Q Sbjct: 3 LLNNTGKYVLLMKRVFAKPDRWKMFFRQFPKELEKLGLQSLPIVAIISIFIGFIMTMQTK 62 Query: 188 FQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 + +++ L++ L E + +++AG+ GS I +EIG+M+I E+IDA+ Sbjct: 63 LNTANPLLPVYTTGLVTRDTLLLEFSSTILCLILAGKVGSNIASEIGTMRITEQIDALEI 122 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGA-------SIVIW-------KYYDI 292 MG++ LI P+I A II +P L + + I G SI+ +Y + Sbjct: 123 MGVNSANYLILPKIAAFIIMMPFLVVFSMALGIFGGYFVGVLTSIMTTGDYLTGIQYAFV 182 Query: 293 PFAVFFSRFHS 303 PF VF+S S Sbjct: 183 PFYVFYSLIKS 193 >gi|254436878|ref|ZP_05050372.1| conserved hypothetical protein [Octadecabacter antarcticus 307] gi|198252324|gb|EDY76638.1| conserved hypothetical protein [Octadecabacter antarcticus 307] Length = 258 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 46/140 (32%), Positives = 76/140 (54%), Gaps = 10/140 (7%) Query: 156 LIRQMYY----------VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 L+R +Y +G +PVV L +F TG +A Q ++F AE +++I Sbjct: 33 LVRPPFYGREFATALLQIGYFSLPVVGLTAFFTGGALALQIYSGGARFSAEAVVPQIVAI 92 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 +RE+G +L +MIA R S+I AEI +MK+ E+IDA+ T+ ++ L PR+ A + Sbjct: 93 GMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQIDALVTLSTHPMKYLTLPRVLAATL 152 Query: 266 SLPLLTILANFSAIIGASIV 285 +P+L + + I G +V Sbjct: 153 VMPILVGVGDIIGIYGGFLV 172 >gi|145352678|ref|XP_001420665.1| ABC(membrane) family transporter: toluene tolerance [Ostreococcus lucimarinus CCE9901] gi|144580900|gb|ABO98958.1| ABC(membrane) family transporter: toluene tolerance [Ostreococcus lucimarinus CCE9901] Length = 308 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 93/167 (55%), Gaps = 6/167 (3%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 KF+ S + + G V+ CA + + +L +Q+ VG + V +L S G Sbjct: 62 KFLWRSAATGLLFGSVLYR----CARQPRRVNWEQTL-QQIARVGPQTLGVSLLTSSFVG 116 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V Q + ++ G + L+ + RE+ ++ A+++ GR GS+I AE+G+M++ E Sbjct: 117 MVFTIQFCKEFAKVGLKNAIGGLLGLAFARELTPVICAIVLTGRIGSSIAAELGTMQVTE 176 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 ++D + +G D V L+ PR+ A +SLP+L+I+ +F+ +GASI++ Sbjct: 177 QVDQLTVLGTDPVDYLVIPRVIACAVSLPILSII-SFAQALGASILL 222 >gi|183983837|ref|YP_001852128.1| YrbE family protein, YrbE5A [Mycobacterium marinum M] gi|183177163|gb|ACC42273.1| YrbE family protein, YrbE5A [Mycobacterium marinum M] Length = 289 Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 55/205 (26%), Positives = 98/205 (47%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 +RQ ++ + V IL+S ++ Q A Q GA + + +R+ L+ Sbjct: 69 VRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGATSLAGAASGLAVIRQGASLVA 128 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV++A GSAI A++GS + EE DA+ MG+ +R L+ PR A I+ LT + F Sbjct: 129 AVLMASAVGSAITADLGSRTMREETDAMEVMGVSVIRRLVVPRFAAAIMIGVALTGVVCF 188 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + + + + F + F S AT ++F L KA + +V+ ++G + Sbjct: 189 VGFFASYMFNVYFQNGAPGSFVATFASFATTDDMFLALFKAVIFGAIVAVVSAQKGLSTK 248 Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361 + V VV+SI +++I++ Sbjct: 249 GGPTGVANSVNAAVVESILVLMIVN 273 >gi|120405353|ref|YP_955182.1| hypothetical protein Mvan_4400 [Mycobacterium vanbaalenii PYR-1] gi|119958171|gb|ABM15176.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 281 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 66/234 (28%), Positives = 113/234 (48%), Gaps = 11/234 (4%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP----VVILISFVT---GA 180 Q G + +TG+ ++ ++ +L I QM + GV + V+++SF+T GA Sbjct: 27 QTLFYGHTLRSTGD---AAIHYRAEILRQIAQMGF-GVGALAAIGGTVVIVSFLTVSVGA 82 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 ++A G QLSQ G E + + + +R IG L+ + +A G+ A++G+M+INEE Sbjct: 83 LVAVIGFNQLSQVGVEALTGFISAFFNVRLIGPLIAGIALAATIGAGTTAQLGAMRINEE 142 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ MG+ V L S R+ A + + L +A SA + A + +Y V+ Sbjct: 143 IDALEVMGVRSVSYLASTRLIAGTLVVVPLYCVALISAFVAAKVGTTVFYGQSVGVYEHY 202 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ ++ + A MA I +V GF +G+ V V S+ Sbjct: 203 FYTFLNPDSVVWSFLLAVTMAVVIMLVHTYYGFNAAGGPAGVGQAVGQSVRASL 256 >gi|315442434|ref|YP_004075313.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|315260737|gb|ADT97478.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 285 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 53/212 (25%), Positives = 100/212 (47%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 +RQ ++ + V +L++ G ++ Q A Q GA + + +R+ L Sbjct: 65 VRQGAFMAGTAVLPTVLVALPIGVTLSIQFALLAGQVGATSLAGAASGLAVIRQAASLTA 124 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A+++A GSAI A++GS + EE DA+ MG+ +R L+ PR A I+ LT + F Sbjct: 125 AILMAAAVGSAITADLGSRTMREETDAMEVMGVSVIRRLVVPRFAAAIMIGVALTGVVCF 184 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + + + + + F + F S T ++ L+KA + IV+ ++G + Sbjct: 185 VGFLASYLFNVYFQNGAPGSFVATFASFTTTGDMIVALVKAVIFGAIVAIVSCQKGMSTR 244 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + V VV+SI I+++++ + Y Sbjct: 245 GGPTGVANSVNAAVVESILILMVVNVAISQLY 276 >gi|255037710|ref|YP_003088331.1| hypothetical protein Dfer_3962 [Dyadobacter fermentans DSM 18053] gi|254950466|gb|ACT95166.1| protein of unknown function DUF140 [Dyadobacter fermentans DSM 18053] Length = 242 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 77/128 (60%), Gaps = 1/128 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM-SILQLREIGVL 214 L+ + +GVS + +V ++S GAV Q A+ L I ++ L+ +++ E+ Sbjct: 28 LMEECVGIGVSSIFIVAIVSTFIGAVSCIQTAYNLVSPIIPISTVALIVRDMEILELAPT 87 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +T +++AG+ GS I +E+G+M+I E+IDA+ MG++ L+ P++ A +++ P+L I + Sbjct: 88 ITCIVLAGKVGSNIASELGTMRITEQIDALEVMGINSSSYLVLPKVVAAMLTFPMLVIFS 147 Query: 275 NFSAIIGA 282 F I+G Sbjct: 148 AFLGILGG 155 >gi|54027028|ref|YP_121270.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54018536|dbj|BAD59906.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 284 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 71/225 (31%), Positives = 117/225 (52%), Gaps = 22/225 (9%) Query: 157 IRQMYYV-GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 IRQ ++ VS P V + + V Q GA ++Q GA F + + +R+ L+ Sbjct: 64 IRQCAFMSNVSAAPTVFVAIPIAVVVSIQVGAL-VNQVGATTFIGAVAGLGIIRQGAPLV 122 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR-IWALIISLPLLTILA 274 T++MIAG GSAI A++GS I EEIDA+ MG++ VR L++PR + A+++S+ +L Sbjct: 123 TSLMIAGAVGSAICADLGSRTIREEIDAMMVMGVNPVRRLVAPRLVAAVLVSM----LLC 178 Query: 275 NFSAIIG-ASIVIWKYY---DIPFAVFFSRFHSTATLANIFTGLIKA-------PFMACA 323 F +G A+ ++ Y P + F F S A +++ L+KA +AC Sbjct: 179 GFIVFVGFATAYMFNVYAQSGTPGS-FIGSFASFAVASDLIVALVKAAIFGALTAIIACD 237 Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 IG+ A +G GV +N++ V T + + II+ L+ + Sbjct: 238 IGLHA--KGGPGGV-ANAVNSAVVTSALMLFATNIILTQLYNTLF 279 >gi|300865114|ref|ZP_07109939.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] gi|300336885|emb|CBN55089.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] Length = 290 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 49/161 (30%), Positives = 84/161 (52%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +I + VG+ + V+LI+ G + Q A +L +FGA +I RE+ +L Sbjct: 70 VIEHLVTVGLGSLRAVLLIALFAGMIFTIQSARELIRFGAVGAVGGAFAIAFCRELAPVL 129 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA ++AG+ GS AEIG M++ E++DA+ + + V L+ PR+ A I LP+LTI + Sbjct: 130 TAGVVAGQVGSGFAAEIGEMQVTEQVDALYMLKTNPVDYLVLPRVVACCIMLPILTIFSV 189 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316 I G + +Y +P +F + ++ T ++K Sbjct: 190 VVGIGGGAFAAAIFYHLPPGMFLESVRTFLEPWDLVTVVVK 230 >gi|308810118|ref|XP_003082368.1| unnamed protein product [Ostreococcus tauri] gi|116060836|emb|CAL57314.1| unnamed protein product [Ostreococcus tauri] Length = 361 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 79/130 (60%), Gaps = 1/130 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 ++Q+ VG + V +L S G V Q + ++ G + L+ + RE+ ++ Sbjct: 137 LQQIARVGPQTLGVSLLTSSFVGMVFTIQFCKEFAKVGLKNAIGGLLGLAFARELTPVIC 196 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A+++ GR GS+I AE+G+M++ E++D + +G D V L+ PR+ A ISLP+L++L +F Sbjct: 197 AIVLTGRIGSSIAAELGTMQVTEQVDQLTVLGTDPVDYLVIPRVIACSISLPILSVL-SF 255 Query: 277 SAIIGASIVI 286 + +GASI++ Sbjct: 256 AQSLGASILL 265 >gi|108798492|ref|YP_638689.1| hypothetical protein Mmcs_1522 [Mycobacterium sp. MCS] gi|119867593|ref|YP_937545.1| hypothetical protein Mkms_1545 [Mycobacterium sp. KMS] gi|108768911|gb|ABG07633.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119693682|gb|ABL90755.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] Length = 271 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 47/163 (28%), Positives = 87/163 (53%), Gaps = 2/163 (1%) Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L +FGA F+ + + +IG ++T +++AG +A+ A++G+ I +E+DA+R MG+ Sbjct: 88 LLEFGAADFAGTGAAYGTVTQIGPVVTVLVVAGAGATAMCADLGARTIRDELDALRVMGV 147 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGA-SIVIWKYYDIPFAVFFSRFHSTATLA 308 D ++ L+ PR+ A + LL+ + ++G + ++ + P A F S + A Sbjct: 148 DPIQTLVVPRVLAATVVATLLSSVVILVGLVGGFAFSVFVQHVTPGA-FISGLTVITSAA 206 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 ++ LIKA A G++A +G +VG +G V VV Sbjct: 207 DVVISLIKAALFGLAAGLIACYKGISVGGGPAGVGNAVNETVV 249 >gi|41407947|ref|NP_960783.1| hypothetical protein MAP1849 [Mycobacterium avium subsp. paratuberculosis K-10] gi|254775059|ref|ZP_05216575.1| hypothetical protein MaviaA2_10356 [Mycobacterium avium subsp. avium ATCC 25291] gi|41396301|gb|AAS04166.1| hypothetical protein MAP_1849 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 286 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 55/205 (26%), Positives = 99/205 (48%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 +RQ ++ + V IL+S ++ Q A Q GA + + +R+ L+ Sbjct: 66 VRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGATSLAGAASGLAVIRQGASLVA 125 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV++A GSAI A++GS + EE DA+ MG+ VR L+ PR A ++ LT + F Sbjct: 126 AVLMASAVGSAITADLGSRTMREETDAMEVMGVSVVRRLVVPRFAAAVMIGVALTGVVCF 185 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + + + + + F S F S AT ++ L+KA + IV+ ++G + Sbjct: 186 AGFFASYMFNVYFQNGAPGSFVSTFASFATTGDMILALLKAIVFGAIVAIVSSQKGLSTK 245 Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361 + V VV++I +++I++ Sbjct: 246 GGPTGVANSVNAAVVEAILLLMIVN 270 >gi|56417212|ref|YP_154286.1| hypothetical protein AM1212 [Anaplasma marginale str. St. Maries] gi|222475576|ref|YP_002563993.1| hypothetical protein AMF_912 [Anaplasma marginale str. Florida] gi|254995379|ref|ZP_05277569.1| hypothetical protein AmarM_05554 [Anaplasma marginale str. Mississippi] gi|255003566|ref|ZP_05278530.1| hypothetical protein AmarPR_05019 [Anaplasma marginale str. Puerto Rico] gi|255004692|ref|ZP_05279493.1| hypothetical protein AmarV_05379 [Anaplasma marginale str. Virginia] gi|56388444|gb|AAV87031.1| hypothetical protein AM1212 [Anaplasma marginale str. St. Maries] gi|222419714|gb|ACM49737.1| Conserved hypothetical protein [Anaplasma marginale str. Florida] Length = 259 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 61/217 (28%), Positives = 112/217 (51%), Gaps = 12/217 (5%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 RQ + + +P+V + + TG + Q A F ++++ +RE+G +L Sbjct: 48 RQFFEMWFFSLPIVGMTALFTGGALVLQDTLVGGGKVAAHFMAGIVTVAIVRELGPVLIG 107 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +++AGR G+A+ AEIG+M+I E+IDA+ T+ D + L++PR+ AL++++P+L I +F Sbjct: 108 LIVAGRVGAAVAAEIGTMRITEQIDALDTLEADPFQYLVAPRVIALMVAMPVLIIYTDFL 167 Query: 278 AIIGASIV--IWKYYD----IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 I G V + Y+ I F RF ++ GL+KA I +V Sbjct: 168 GIFGGYAVGTLGLGYNPNEYIGGVAEFLRFK------DVTEGLVKAVSFGFVIAMVGCYS 221 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 G+ + +G T VV S ++++++ + +FY Sbjct: 222 GYYCSGGARGVGAATTNTVVSSSMLIVLLNYVITVFY 258 >gi|110638590|ref|YP_678799.1| ABC transporter permease [Cytophaga hutchinsonii ATCC 33406] gi|110281271|gb|ABG59457.1| ABC transporter, permease [Cytophaga hutchinsonii ATCC 33406] Length = 243 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 15/214 (7%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSI-DLMSIL 206 KF + I + +G + + +V ++S GAV Q A L I+ + ++ + Sbjct: 20 KFSVYWKLTIDECILIGTNSIFIVAIVSSFIGAVTCIQTAANLVSPLVPIYVVASVVREM 79 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 + E+ T V++AG+ GS+I ++G+M+I E++DA+ MG++ LI P+I A +I+ Sbjct: 80 SILELAPTFTCVVLAGKVGSSIAGQLGTMRITEQVDALEVMGINSASYLILPKILASLIT 139 Query: 267 LPLLTILANFSAIIGASIV-----IWKYYDIPFAVF--FSRFHSTATLANIFTGLIKAPF 319 +P+L A +I+G I I D + V F+ F N+ LIKA Sbjct: 140 IPMLVTFAGLLSILGGYIAGILGNIITTQDFVYGVQIDFNEF-------NVTFALIKAFV 192 Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 A I ++ +G+ + +G+ TT VV S Sbjct: 193 FAFLISSISAYQGYFTKGGALEVGQSSTTAVVNS 226 >gi|118466063|ref|YP_881276.1| TrnB1 protein [Mycobacterium avium 104] gi|254774784|ref|ZP_05216300.1| TrnB1 protein [Mycobacterium avium subsp. avium ATCC 25291] gi|118167350|gb|ABK68247.1| TrnB1 protein [Mycobacterium avium 104] Length = 255 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 54/187 (28%), Positives = 97/187 (51%), Gaps = 10/187 (5%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +LI FV ++ + GA LS GA + S+ ++G ++TA++++G +A Sbjct: 57 IPYTVLIVFVLNILLVEIGAGDLSGAGAGLASVT--------QVGPVVTAMVVSGAGSTA 108 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI-VI 286 + A++G+ I EEIDA++ +G++ V+ L+ PRI A +L + + + G+ I V+ Sbjct: 109 MCADLGARTIREEIDAMKVIGVNPVQALVVPRIIAATFVAVMLYAVVAVTGLTGSYIFVV 168 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + + P A F + L + LIKA + G++A +G +VG +G V Sbjct: 169 FVQHVTPGA-FVAGMTLVTGLPQVVISLIKATLFGLSAGLIACYKGLSVGGGPTGVGNAV 227 Query: 347 TTCVVQS 353 VV S Sbjct: 228 NETVVFS 234 >gi|169631675|ref|YP_001705324.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977] gi|169243642|emb|CAM64670.1| Putative YrbE family protein [Mycobacterium abscessus] Length = 288 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 69/287 (24%), Positives = 129/287 (44%), Gaps = 10/287 (3%) Query: 84 LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFC 143 + +F + P R + K ++ K V+ + + SQ +LG+ ++ Sbjct: 1 MTTFEGTSPARPATPSRDAVSGALKE---YVRKHPVQAVETAGSQI-VLGV---RAMQYM 53 Query: 144 ASSYKFKGFL-LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDL 202 S + F I Q ++ S V +L++ G ++ Q A Q GA + Sbjct: 54 FSDIVHRAFPWREFIHQGAFMAGSAVVPTLLVAIPIGVTLSIQFALLAGQVGASSLAGAA 113 Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 + +R+ L+ AV++A GSAI A++GS + EEIDA+ MG+ +R L+ PR+ A Sbjct: 114 SGVAIVRQGASLVAAVLMASAVGSAITADLGSRTMREEIDAMEVMGVSVIRRLVVPRVAA 173 Query: 263 LIISLPLLTILANFSAIIGASIV-IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMA 321 ++ LT F + + + ++ + P + F + F S + ++ L+KA Sbjct: 174 AVLVGVGLTGTTCFVGFLASYLFNVYFQHGAPGS-FVATFASFTRVDDLVLALLKAILYG 232 Query: 322 CAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + IVA +G + V VV+SI ++++I+ L + Y Sbjct: 233 LIVAIVACDKGLTTKGGPAGVANSVNAAVVESILVLMLINVLVSQVY 279 >gi|296167380|ref|ZP_06849782.1| integral membrane protein YrbE1A [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897324|gb|EFG76928.1| integral membrane protein YrbE1A [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 271 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 12/200 (6%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P+ +L+ F ++AQ GA LS GA I ++ ++G L T +++AG +A Sbjct: 72 IPLTVLLIFTLNVLLAQFGAADLSGAGAAIGAVT--------QLGPLTTVLVVAGAGSTA 123 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ I EEIDA+ +G+D + L+ PR+ A + LL L ++G + Sbjct: 124 ICADLGARTIREEIDAMEVLGIDPIHRLVVPRVIAATLVATLLNGLVITVGLVGGYLFGV 183 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG---- 343 ++ + + + L + +KA G+V G V S LG Sbjct: 184 YLQNVSGGAYLATLTTITGLPEVVIATVKAAIFGLIAGLVGCYRGLTVRGGSKGLGTAVN 243 Query: 344 KKVTTCVVQSISIVIIIDSL 363 + V CVV ++ +++ ++ Sbjct: 244 ETVVLCVVALYAVNVVLTTI 263 >gi|269128028|ref|YP_003301398.1| hypothetical protein Tcur_3829 [Thermomonospora curvata DSM 43183] gi|268312986|gb|ACY99360.1| protein of unknown function DUF140 [Thermomonospora curvata DSM 43183] Length = 288 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/96 (38%), Positives = 59/96 (61%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 VV ++ TGA++ QG L + GAE FS + S +RE+ ++ V + + GSA Sbjct: 79 VVATMAMATGAMVGMQGYPSLERIGAEAFSGVMASFANVREVTPIIAGVALIAQVGSAFT 138 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 AEIG+M+I+EEIDA+ MG++ + L+ R+ A +I Sbjct: 139 AEIGAMRISEEIDALEVMGINSLTFLVCTRVAAGVI 174 >gi|240168187|ref|ZP_04746846.1| integral membrane protein YrbE1A [Mycobacterium kansasii ATCC 12478] Length = 268 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 52/199 (26%), Positives = 93/199 (46%), Gaps = 14/199 (7%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 VP +L+ F ++AQ GA LS GA I ++ ++G +T +++AG +A Sbjct: 69 VPFTVLLIFTLNVLLAQFGAADLSGAGAAIGAVT--------QLGPQVTVLVVAGAGSTA 120 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ I EEIDA+ +G+D + L+ PR+ A + LL L ++G + Sbjct: 121 ICADLGARTIREEIDAMEVLGIDPIHRLVVPRVIAATLIATLLNALVITVGLVGGYLFGV 180 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 ++ + + + L + ++KA G+V G V S LG V Sbjct: 181 YLQNVSGGAYLATLTTITGLPEVVIAMVKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVN 240 Query: 348 TCVVQSISIVIIIDSLFAI 366 ++V+ + +LFA+ Sbjct: 241 E------TVVLCVVALFAV 253 >gi|218262319|ref|ZP_03476833.1| hypothetical protein PRABACTJOHN_02507 [Parabacteroides johnsonii DSM 18315] gi|218223470|gb|EEC96120.1| hypothetical protein PRABACTJOHN_02507 [Parabacteroides johnsonii DSM 18315] Length = 248 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 63/227 (27%), Positives = 118/227 (51%), Gaps = 24/227 (10%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 ++ F LI+++Y +GV + +VI+IS G VIA Q + +S F+I + Sbjct: 24 RWSMFFKQLIKEIYKLGVDSLWIVIIISIFIGTVIAIQISLNISSPLIPKFTIGYTT--- 80 Query: 208 LREIGVL-----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 REI +L + ++++AG+ GS I +EIG+M++ E+IDA+ MG++ LI P++ Sbjct: 81 -REIILLEFSSSIMSLILAGKVGSNIASEIGTMRVTEQIDAMEIMGVNSANFLILPKMVG 139 Query: 263 LIISLPLLTILANFSAIIG--------ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 ++ +P+L I + F+ I+G + + ++ +F+ F+ I+ + Sbjct: 140 MMTFIPVLVIFSMFTGILGGIAASHSTGTGMTPASFEYGLQFYFNEFY-------IWYSI 192 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 IK+ A I +A G+ V + +GK T VV S ++++ D Sbjct: 193 IKSVVYAFIISSIAAYFGYNVKGGALEVGKASTNAVVMSSIMILLAD 239 >gi|254819657|ref|ZP_05224658.1| hypothetical protein MintA_07029 [Mycobacterium intracellulare ATCC 13950] Length = 280 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 54/205 (26%), Positives = 99/205 (48%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 +RQ ++ + V IL+S ++ Q A Q GA + + +R+ L+ Sbjct: 60 VRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGATSLAGAASGLAVIRQGASLVA 119 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV++A GSAI A++GS + EE DA+ MG+ +R L+ PR A ++ LT + F Sbjct: 120 AVLMASAVGSAITADLGSRTMREETDAMEVMGVSVIRRLVVPRFAAAVMIGVALTGVVCF 179 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + + + + + F S F S AT ++ L+KA + IV+ ++G + Sbjct: 180 AGFFASYMFNVYFQNGAPGSFVSTFASFATTGDMVLALLKAIVFGAIVAIVSSQKGLSTK 239 Query: 337 VHSNSLGKKVTTCVVQSISIVIIID 361 + V VV++I +++I++ Sbjct: 240 GGPTGVANSVNAAVVEAILLLMIVN 264 >gi|312131750|ref|YP_003999090.1| hypothetical protein Lbys_3075 [Leadbetterella byssophila DSM 17132] gi|311908296|gb|ADQ18737.1| protein of unknown function DUF140 [Leadbetterella byssophila DSM 17132] Length = 243 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 1/210 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQ-GAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 I + +G+ + +V +++F GAV Q A +S +++ + L E+ Sbjct: 30 IDECMMIGIDSLLIVCIVAFFIGAVTCVQINANLVSPIIPTYIVSNIVRDMMLLELSSTF 89 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 V++AG+ GS I +E+G+M+I E+I+A+ MG++ L+ P++ A + P+L IL+ Sbjct: 90 ICVILAGKVGSNIASELGTMRITEQIEALEVMGINAASYLVLPKVLAAFVMFPILAILSG 149 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 F I+G I I + + N+ +IK+ I ++ +GF Sbjct: 150 FIGIVGGYIAGTATGIITPEQYIYGIRFSFIPFNLVIPIIKSAVFGVLIATISAYKGFYT 209 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + +GK TT V S ++I D L A Sbjct: 210 RGGALEVGKVSTTAVTNSCIAILIADYLLA 239 >gi|126436744|ref|YP_001072435.1| hypothetical protein Mjls_4172 [Mycobacterium sp. JLS] gi|126236544|gb|ABN99944.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 257 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/194 (25%), Positives = 94/194 (48%), Gaps = 8/194 (4%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L F ++ + GA S GA + ++ +IG ++T ++IAG +A Sbjct: 60 IPFTVLTVFTINVLLVEIGAADFSGTGAALGAVT--------QIGPIVTVLVIAGAGATA 111 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + A++G+ I EEIDA+R +G++ ++ L+ PRI A + +LT L I+G+ I Sbjct: 112 MCADLGARTIREEIDALRVLGINPIQALVVPRIVAATVVSLMLTSLVTMVGIVGSFIFSV 171 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + ++ F + + L+KA A ++A +G +VG +G V Sbjct: 172 YFQNVTPGAFAAGLTLLVGTPEVVVNLLKAAIFGLAASLIACYKGISVGGGPQGVGNAVN 231 Query: 348 TCVVQSISIVIIID 361 VV + + +I+ Sbjct: 232 ETVVYTFMALFVIN 245 >gi|118616793|ref|YP_905125.1| integral membrane protein YrbE1A [Mycobacterium ulcerans Agy99] gi|118568903|gb|ABL03654.1| conserved hypothetical integral membrane protein YrbE1A [Mycobacterium ulcerans Agy99] Length = 267 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 12/200 (6%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P+ +L+ F ++AQ GA +S GA I ++ ++G L T +++AG +A Sbjct: 68 IPLTVLLIFTLNVLLAQFGAADISGAGAAIGAVT--------QLGPLTTVLVVAGAGSTA 119 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ I EEIDA+ +G+D + L+ PR+ A LL L ++G + Sbjct: 120 ICADLGARTIREEIDAMEVLGIDPIHRLVVPRVIAATFVATLLNALVITVGLVGGYLFGV 179 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG---- 343 +I + + + + + ++KA G+V G V S LG Sbjct: 180 YLQNINGGAYLATLTTITGMPEVTIAMVKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVN 239 Query: 344 KKVTTCVVQSISIVIIIDSL 363 + V CVV ++ +I+ ++ Sbjct: 240 ETVVLCVVALYAVNVILTTI 259 >gi|284034023|ref|YP_003383954.1| hypothetical protein Kfla_6152 [Kribbella flavida DSM 17836] gi|283813316|gb|ADB35155.1| protein of unknown function DUF140 [Kribbella flavida DSM 17836] Length = 275 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/199 (24%), Positives = 93/199 (46%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V+ ++F TG + QG L+Q G F+ + + + REIG L+ + +A G Sbjct: 64 VGVITFLAFFTGTEVGLQGYSALNQIGTSAFAGFVSAYINTREIGPLIAGIALAATVGCG 123 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 A++G+M+I+EEIDA+ M + + L++ RI A +I++ L ++ S+ + + Sbjct: 124 FTAQLGAMRISEEIDALEVMAIPSLPFLVTTRIIAGLIAVVPLYVVGLLSSYFATRLTVT 183 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 +Y + FH ++ K A + +V G+ +G V Sbjct: 184 TFYGQSTGTYDHYFHLFLPPGDVLWSFGKVLVFAVLVILVHCYHGYHASGGPAGVGVAVG 243 Query: 348 TCVVQSISIVIIIDSLFAI 366 V SI ++ ++D L ++ Sbjct: 244 RAVRTSIVVINVVDLLLSM 262 >gi|183980441|ref|YP_001848732.1| integral membrane protein YrbE1A [Mycobacterium marinum M] gi|183173767|gb|ACC38877.1| conserved hypothetical integral membrane protein YrbE1A [Mycobacterium marinum M] Length = 267 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 12/200 (6%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P+ +L+ F ++AQ GA +S GA I ++ ++G L T +++AG +A Sbjct: 68 IPLTVLLIFTLNVLLAQFGAADISGAGAAIGAVT--------QLGPLTTVLVVAGAGSTA 119 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ I EEIDA+ +G+D + L+ PR+ A LL L ++G + Sbjct: 120 ICADLGARTIREEIDAMEVLGIDPIHRLVVPRVIAATFVATLLNALVITVGLVGGYLFGV 179 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG---- 343 +I + + + + + ++KA G+V G V S LG Sbjct: 180 YLQNINGGAYLATLTTITGMPEVTIAMVKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVN 239 Query: 344 KKVTTCVVQSISIVIIIDSL 363 + V CVV ++ +I+ ++ Sbjct: 240 ETVVLCVVALYAVNVILTTI 259 >gi|41409700|ref|NP_962536.1| hypothetical protein MAP3602 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398532|gb|AAS06152.1| hypothetical protein MAP_3602 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 271 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 12/200 (6%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P+ +L+ F ++AQ GA LS GA I ++ ++G L T +++AG +A Sbjct: 72 IPLTVLLIFTLNVLLAQFGAADLSGAGAAIGAVT--------QLGPLTTVLVVAGAGSTA 123 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ I EEIDA+ +G+D + L+ PR+ A + LL L ++G + Sbjct: 124 ICADLGARTIREEIDAMEVLGIDPIHRLVVPRVIAATLVATLLNGLVITVGLVGGYLFGV 183 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG---- 343 ++ + + + L + +KA G+V G V S LG Sbjct: 184 YLQNVSGGAYLATLTTITGLPEVVIATVKAAVFGLIAGLVGCFRGLTVRGGSKGLGTAVN 243 Query: 344 KKVTTCVVQSISIVIIIDSL 363 + V CVV ++ +++ ++ Sbjct: 244 ETVVLCVVALYAVNVVLTTI 263 >gi|330875108|gb|EGH09257.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. glycinea str. race 4] Length = 148 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 79/146 (54%), Gaps = 1/146 (0%) Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 SA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA IS+P+L ++ + I GAS V Sbjct: 1 SALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFSVVGIWGASWV 60 Query: 286 IWKYYDIPFAVFFSRFHSTATLAN-IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 + + F+S ++ + N + G+IK+ A + +A+ +G+ S + + Sbjct: 61 AIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCEPTSEGISR 120 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + V+ +D + F Sbjct: 121 ATTRTVVYASLAVLGLDFILTALMFG 146 >gi|183984020|ref|YP_001852311.1| integral membrane protein YrbE3A_1 [Mycobacterium marinum M] gi|183177346|gb|ACC42456.1| conserved hypothetical integral membrane protein YrbE3A_1 [Mycobacterium marinum M] Length = 255 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 51/187 (27%), Positives = 93/187 (49%), Gaps = 14/187 (7%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L++F+ ++ + GA S GA + S+ R+IG ++T +++AG +A Sbjct: 58 IPYTVLLTFIENILLTEIGAADFSGTGAALGSV--------RQIGPIVTVLVVAGAGATA 109 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA---LIISLPLLTILANFSAIIGASI 284 + A++G+ I EE+DA+R MG+D ++ L+ PR+ A + ++L IL S + Sbjct: 110 MCADLGARTIREELDALRVMGVDPIQALVVPRVLAATTVSLALSASVILVGLSGAYFFCV 169 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 I FA + T ++ L+KA + G++A +G +VG +G Sbjct: 170 FIQHVSPGAFAAGLTLIIGT---TDVVIALVKAALFGLSAGLIACYKGISVGGGPAGVGN 226 Query: 345 KVTTCVV 351 V VV Sbjct: 227 AVNETVV 233 >gi|118619125|ref|YP_907457.1| integral membrane protein YrbE3A_1 [Mycobacterium ulcerans Agy99] gi|118571235|gb|ABL05986.1| conserved hypothetical integral membrane protein YrbE3A_1 [Mycobacterium ulcerans Agy99] Length = 255 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 51/187 (27%), Positives = 93/187 (49%), Gaps = 14/187 (7%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L++F+ ++ + GA S GA + S+ R+IG ++T +++AG +A Sbjct: 58 IPYTVLLTFIENILLTEIGAADFSGTGAALGSV--------RQIGPIVTVLVVAGAGATA 109 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA---LIISLPLLTILANFSAIIGASI 284 + A++G+ I EE+DA+R MG+D ++ L+ PR+ A + ++L IL S + Sbjct: 110 MCADLGARTIREELDALRVMGVDPIQALVVPRVLAATTVSLALSASVILVGLSGAYFFCV 169 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 I FA + T ++ L+KA + G++A +G +VG +G Sbjct: 170 FIQHVSPGAFAAGLTLIIGT---TDVVIALVKAALFGLSAGLIACYKGISVGGGPAGVGN 226 Query: 345 KVTTCVV 351 V VV Sbjct: 227 AVNETVV 233 >gi|118464753|ref|YP_884137.1| hypothetical protein MAV_5017 [Mycobacterium avium 104] gi|254776559|ref|ZP_05218075.1| hypothetical protein MaviaA2_18089 [Mycobacterium avium subsp. avium ATCC 25291] gi|118166040|gb|ABK66937.1| conserved hypothetical protein [Mycobacterium avium 104] Length = 258 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 12/200 (6%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P+ +L+ F ++AQ GA LS GA I ++ ++G L T +++AG +A Sbjct: 59 IPLTVLLIFTLNVLLAQFGAADLSGAGAAIGAVT--------QLGPLTTVLVVAGAGSTA 110 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ I EEIDA+ +G+D + L+ PR+ A + LL L ++G + Sbjct: 111 ICADLGARTIREEIDAMEVLGIDPIHRLVVPRVIAATLVATLLNGLVITVGLVGGYLFGV 170 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG---- 343 ++ + + + L + +KA G+V G V S LG Sbjct: 171 YLQNVSGGAYLATLTTITGLPEVVIATVKAAVFGLIAGLVGCFRGLTVRGGSKGLGTAVN 230 Query: 344 KKVTTCVVQSISIVIIIDSL 363 + V CVV ++ +++ ++ Sbjct: 231 ETVVLCVVALYAVNVVLTTI 250 >gi|254822928|ref|ZP_05227929.1| hypothetical protein MintA_23574 [Mycobacterium intracellulare ATCC 13950] Length = 255 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 12/200 (6%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P+ +L+ F ++AQ GA LS GA I ++ ++G L T +++AG +A Sbjct: 56 IPLTVLLIFTLNVLLAQFGAADLSGAGAAIGAVT--------QLGPLTTVLVVAGAGSTA 107 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ I EEIDA+ +G+D + L+ PR+ A + LL L ++G + Sbjct: 108 ICADLGARTIREEIDAMEVLGIDPIHRLVVPRVIAATLVATLLNGLVITVGLVGGYLFGV 167 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG---- 343 ++ + + + L + +KA G+V G V S LG Sbjct: 168 YLQNVSGGAYLATLTTITGLPEVVIATVKAAVFGLIAGLVGCFRGLTVRGGSKGLGTAVN 227 Query: 344 KKVTTCVVQSISIVIIIDSL 363 + V CVV ++ +++ ++ Sbjct: 228 ETVVLCVVALYAVNVVLTTI 247 >gi|134103293|ref|YP_001108954.1| putative ABC-transporter integral membrane protein [Saccharopolyspora erythraea NRRL 2338] gi|291004488|ref|ZP_06562461.1| putative ABC-transporter integral membrane protein [Saccharopolyspora erythraea NRRL 2338] gi|133915916|emb|CAM06029.1| putative ABC-transporter integral membrane protein [Saccharopolyspora erythraea NRRL 2338] Length = 263 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 56/219 (25%), Positives = 107/219 (48%), Gaps = 12/219 (5%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 ++Q +++ + L++ GAVIA Q Q GA+ F+ + +++ ++T Sbjct: 43 VQQCWFIASVTILPTALVAIPFGAVIALQLGSLTRQIGAQSFTGGASVLAIIQQASPIVT 102 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++IAG GSAI A++GS KI +EIDA+ +G+ V L+ PR+ A ++ LL + + Sbjct: 103 ALLIAGAGGSAICADLGSRKIRDEIDAMEVLGVSPVHRLVVPRVLAAMLVAVLLNGMVSV 162 Query: 277 SAIIGASIVIWKYYDI------PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330 ++G ++++ P A + + F++ A L +I+ +KA G+VA Sbjct: 163 VGVMGG-----YFFNVIMQGGTPGA-YMASFNALAQLPDIWISELKALIFGFLAGVVAAY 216 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 G +G V VV + ++ ++ + Y Sbjct: 217 RGLNPPPGPKGVGDAVNQSVVITFLLLFAVNFVLTTIYL 255 >gi|120405558|ref|YP_955387.1| hypothetical protein Mvan_4606 [Mycobacterium vanbaalenii PYR-1] gi|119958376|gb|ABM15381.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 255 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 50/187 (26%), Positives = 95/187 (50%), Gaps = 14/187 (7%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L++F+ ++ + GA S GA + ++ R+IG ++T +++AG +A Sbjct: 58 IPYTVLLTFIETILLTEIGASDFSGTGAALGTV--------RQIGPIVTVLVVAGAGATA 109 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW-ALIISLPL--LTILANFSAIIGASI 284 + A++G+ I EE+DA+R MG++ ++ L+ PR+ A+++SL L IL S GA Sbjct: 110 MCADLGARTIREELDALRVMGINPIQALVVPRVLAAMVVSLALSATVILVGLS---GAYF 166 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 + D+ F + ++ L+KA + G++A +G +V +G Sbjct: 167 FVVYIQDVSPGAFAAGLTLIIGATDVVIALVKAALFGLSAGLIACYKGISVRGGPAGVGN 226 Query: 345 KVTTCVV 351 V VV Sbjct: 227 AVNETVV 233 >gi|54027607|ref|YP_121849.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54019115|dbj|BAD60485.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 284 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 92/187 (49%), Gaps = 10/187 (5%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P+ +++S GAV Q GA I + + + I+Q + L+T++MIAG GSA Sbjct: 83 IPIGVIVSIQVGAVAGQVGATSF------IGAANGLGIVQ--QGAPLVTSIMIAGAVGSA 134 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW-ALIISLPLLTILANFSAIIGASIVI 286 I A++GS I EEIDA++ MG+D +R L++PR+ A+++S+ L + + G I Sbjct: 135 ICADLGSRTIREEIDAMKVMGVDPMRRLVAPRLGAAMLVSVLLCGFVVFVGFLTGYIFNI 194 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + P + F S A ++ L+K+ I+A G + V Sbjct: 195 FAQGGTP-GSYIGTFSSFAVTRDLLVALVKSLIFGLLAAIIACDTGLNTRGGPGGVANSV 253 Query: 347 TTCVVQS 353 + VV S Sbjct: 254 NSAVVSS 260 >gi|162451969|ref|YP_001614336.1| putative ABC transport system permease protein [Sorangium cellulosum 'So ce 56'] gi|161162551|emb|CAN93856.1| putative ABC transport system permease protein [Sorangium cellulosum 'So ce 56'] Length = 285 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 24/240 (10%) Query: 142 FCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ-------LSQFG 194 +CA + G ++++QMY +G + + ++ G ++ Q Q L+ G Sbjct: 58 YCAKGRREPG---AVLQQMYEIGNKSLFFLTVVMGFIGMIMVFQAGQQAKRVIPDLTMLG 114 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 A L +R++ + A+M+A R G+ I AEIGSM + E++DA+R D + Sbjct: 115 ATYLE------LLVRDLAASIAALMLATRVGAGIAAEIGSMVVTEQVDALRMCAADPIDY 168 Query: 255 LISPRIWALIISLPLLTILANFSAIIG---ASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 LI PR I SL + T L +SA + + + +D+ F + S ++ Sbjct: 169 LIKPR---FIASLLMTTCLIVWSAAVSFTTGMVTAYSMFDVSPETFMN--VSLVDAGDLA 223 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 TGL K AI +V+ G + S +G T VV S VI+++ L + F I Sbjct: 224 TGLAKCVAYGAAIPVVSGHSGLSTFGGSEGVGWATTRAVVNSSLAVIVLNMLISAAAFLI 283 >gi|257054990|ref|YP_003132822.1| ABC-type transport system involved in resistance to organic solvents, permease component [Saccharomonospora viridis DSM 43017] gi|256584862|gb|ACU95995.1| ABC-type transport system involved in resistance to organic solvents, permease component [Saccharomonospora viridis DSM 43017] Length = 267 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 50/202 (24%), Positives = 95/202 (47%), Gaps = 4/202 (1%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 ++F+ F ++Q +++ + L++ G VIA +Q GA+ F+ + Sbjct: 40 PFQFREF----VQQFWFIASVSILPTALVAIPFGGVIALHVGSLTTQIGAQSFTGAASVL 95 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 +++ ++TA++IAG GSA+ A++GS I EEIDA++ +G+ ++ L+ PR+ A + Sbjct: 96 AIIQQASPIVTALLIAGAGGSAMCADLGSRTIREEIDALKVLGVSPIQRLVVPRVLAAMA 155 Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325 L + + + G D + + F + A L +++ G IKA G Sbjct: 156 VAVFLNGMVSVVGVCGGYFFNVIMQDGTPGAYLASFSALAQLPDLWIGEIKALVFGFVAG 215 Query: 326 IVAMKEGFAVGVHSNSLGKKVT 347 +VA G +G V Sbjct: 216 VVAAHRGLNPSAGPKGVGDAVN 237 >gi|41408215|ref|NP_961051.1| hypothetical protein MAP2117c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396570|gb|AAS04434.1| hypothetical protein MAP_2117c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 255 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 54/187 (28%), Positives = 96/187 (51%), Gaps = 10/187 (5%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +LI FV ++ + GA LS GA + S+ ++G ++TA++++G +A Sbjct: 57 IPYTVLIVFVLNILLVEIGAGDLSGAGAGLASVT--------QVGPVVTAMVVSGAGSTA 108 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI-VI 286 + A++G+ I EEIDA++ +G++ V+ L+ PRI A +L + + G+ I V+ Sbjct: 109 MCADLGARTIREEIDAMKVIGVNPVQALVVPRIIAATFVAVMLYAVVAVIGLTGSYIFVV 168 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + + P A F + L + LIKA + G++A +G +VG +G V Sbjct: 169 FVQHVTPGA-FVAGMTLVTGLPQVVISLIKATLFGLSAGLIACYKGLSVGGGPTGVGNAV 227 Query: 347 TTCVVQS 353 VV S Sbjct: 228 NETVVFS 234 >gi|296171119|ref|ZP_06852572.1| integral membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894375|gb|EFG74128.1| integral membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 256 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 68/250 (27%), Positives = 117/250 (46%), Gaps = 25/250 (10%) Query: 136 ISNTGEFCASS-----------YKFKGFLLSLIRQMYYVG-VSGVPVVIL-ISFVTGAVI 182 + + GEF A S + ++ FLL Q ++V VS +P ++L I F V Sbjct: 12 LRSAGEFFAMSLDTFVAMFKLPFPWREFLL----QTWFVARVSIIPTLLLTIPFTVLVVF 67 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 L +FGA FS + + +IG ++T +++AG +A+ A++G+ I++E+D Sbjct: 68 TMN--ILLVEFGAADFSGTGAATASVTQIGPVVTVLVVAGTGATAMCADLGARAIHDELD 125 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA---SIVIWKYYDIPFAVFFS 299 A+R MG+D VR L +PR+ A + L L + G+ S+ I FA + Sbjct: 126 ALRVMGVDPVRRLAAPRVLAATVVAVSLVSLVTLVGLGGSFFFSVFIQHVTPGAFAAGLT 185 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 L ++ GL+K A ++A +G +VG +G V VV S + + Sbjct: 186 LLTH---LPDLVLGLVKGALFGMAAALIACYKGISVGGGPQGVGNAVNETVVYSFIALFV 242 Query: 360 IDSLFAIFYF 369 I+ + Y+ Sbjct: 243 INIVATAVYY 252 >gi|311744834|ref|ZP_07718630.1| ABC superfamily ATP binding cassette transporter permease protein [Aeromicrobium marinum DSM 15272] gi|311311951|gb|EFQ81872.1| ABC superfamily ATP binding cassette transporter permease protein [Aeromicrobium marinum DSM 15272] Length = 258 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 66/224 (29%), Positives = 113/224 (50%), Gaps = 6/224 (2%) Query: 146 SYKFKGFLLSLIRQMYY-VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204 ++ + FLL Q Y+ + V+ VP L++ GAVIA Q + QFGA+ F+ Sbjct: 31 PFQMREFLL----QAYFTIRVTIVPTA-LVAIPFGAVIALQVGGLIKQFGAQSFTGSAAV 85 Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264 + +R G + TA++IAG +GSAI A+ G+ KI EE+DA+ +G+D ++ L+ PR+ A++ Sbjct: 86 LAVVRNAGPIATALLIAGAAGSAIAADFGARKIREELDAMMVLGIDPIQRLVVPRVLAVM 145 Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI 324 + L L F + G + D + + F + A L +I G++KA Sbjct: 146 LIAVFLNGLVTFVGVAGGYVFNVLLQDGTPGAYLASFTALAQLPDILQGMVKAVIFGFLA 205 Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 IVA +G +G V VV + ++ ++ + + Y Sbjct: 206 AIVASYKGMNAKGGPKGVGDAVNEAVVITFVLLFAVNFVVSALY 249 >gi|15828391|ref|NP_302654.1| hypothetical protein ML2587 [Mycobacterium leprae TN] gi|221230868|ref|YP_002504284.1| hypothetical protein MLBr_02587 [Mycobacterium leprae Br4923] gi|13093821|emb|CAC32119.1| conserved membrane protein [Mycobacterium leprae] gi|219933975|emb|CAR72687.1| conserved membrane protein [Mycobacterium leprae Br4923] Length = 267 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 12/200 (6%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P+ +L+ F ++AQ A LS GA I ++ ++G L T +++AG ++ Sbjct: 68 IPLTVLLIFTLNVLLAQFSAADLSGAGAAIGAVT--------QLGPLTTVLVVAGAGSTS 119 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ I EEIDA+ +G+D + L+ PR+ A + LL L ++G + Sbjct: 120 ICADLGARTIREEIDAMEVLGIDPIHRLVVPRVLAATLVATLLNGLVITVGLVGGYLFGV 179 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG---- 343 ++ + + + L + +KA G+V G V SN LG Sbjct: 180 YLQNVSGGAYLATLTTITGLPEVVIATVKAATFGLIAGLVGCYRGLIVRGGSNGLGAAVN 239 Query: 344 KKVTTCVVQSISIVIIIDSL 363 + V CVV ++ +++ ++ Sbjct: 240 ETVVLCVVALYAVNVVLTTI 259 >gi|282900961|ref|ZP_06308894.1| protein of unknown function DUF140 [Cylindrospermopsis raciborskii CS-505] gi|281194052|gb|EFA69016.1| protein of unknown function DUF140 [Cylindrospermopsis raciborskii CS-505] Length = 259 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 4/184 (2%) Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 VG + V+L+S G + Q A +L +FGA ++ RE+ +LTA +IAG Sbjct: 49 VGPGSLSPVLLVSGFAGMIFTIQTARELIRFGAVDNLGGAFAVAFCRELAPILTASVIAG 108 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 + GSA AEIG+M++ E+IDA+ + D + L+ PR+ A + +P++ I A + G Sbjct: 109 QVGSAFAAEIGAMQVTEQIDALYLLKTDPIDYLVLPRVIACGLMMPVMMIFALIMGVSGG 168 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 ++Y + F T ++ ++K GI+ G + G+ + Sbjct: 169 IFAGLQFYQVQPENFLESVRDFLTPGDMMMIIVK----GVIFGIIVAVNGCSWGLTTRGG 224 Query: 343 GKKV 346 K+V Sbjct: 225 AKEV 228 >gi|240170711|ref|ZP_04749370.1| hypothetical protein MkanA1_15455 [Mycobacterium kansasii ATCC 12478] Length = 255 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 69/248 (27%), Positives = 120/248 (48%), Gaps = 22/248 (8%) Query: 136 ISNTGEFCASS-----------YKFKGFLLSLIRQMYYVG-VSGVPVVIL-ISFVTGAVI 182 + + GEF A S + ++ FLL Q ++V VS +P ++L I F V Sbjct: 11 LRSVGEFFAMSLDTLVAMFKWPFPWREFLL----QSWFVARVSIIPTLLLAIPFTVLVVF 66 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 L +FGA FS + + +IG ++T +++AG +A+ A++G+ I++E+D Sbjct: 67 TLN--ILLVEFGAADFSGTGAATASVTQIGPIVTVLVVAGTGATAMCADLGARTIHDELD 124 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA-SIVIWKYYDIPFAVFFSRF 301 A+R MG+D +R L +PR+ A + L L + G+ + ++ + P A F + Sbjct: 125 ALRVMGVDPIRRLAAPRVLAATVVAVSLVSLVTLVGLAGSFAFSVFVQHVTPGA-FAAGL 183 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS-ISIVIII 360 L + GL+K A ++A +G +VG +G V VV S I++ +I Sbjct: 184 TLITHLPELILGLVKGALFGMAAALIACYKGISVGGGPQGVGNAVNETVVYSFIALFVIN 243 Query: 361 DSLFAIFY 368 A+FY Sbjct: 244 IVATAVFY 251 >gi|295690359|ref|YP_003594052.1| hypothetical protein Cseg_2991 [Caulobacter segnis ATCC 21756] gi|295432262|gb|ADG11434.1| protein of unknown function DUF140 [Caulobacter segnis ATCC 21756] Length = 266 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 38/104 (36%), Positives = 61/104 (58%), Gaps = 10/104 (9%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQ-----GAFQLSQFGAEIFSIDLMSILQLREIG 212 RQ+ +G +PVV L + TGA +A G +Q +I ++ + RE+G Sbjct: 52 RQLTTIGFFSLPVVALTALFTGAALALNIHIGGGRLNAAQAMPQIVALGIT-----RELG 106 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILI 256 +L A+M+AGR +AI AEIG+M+ E++DA+RT+ D +R L+ Sbjct: 107 PVLAALMLAGRVSAAIAAEIGAMRATEQLDAMRTLSTDPIRYLV 150 >gi|327402880|ref|YP_004343718.1| hypothetical protein Fluta_0879 [Fluviicola taffensis DSM 16823] gi|327318388|gb|AEA42880.1| protein of unknown function DUF140 [Fluviicola taffensis DSM 16823] Length = 246 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 42/156 (26%), Positives = 85/156 (54%), Gaps = 8/156 (5%) Query: 135 VISNTGEFCASSY-------KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +I N G++ Y K++ F +M +G+ +P+V L+S GAVIA Q A Sbjct: 3 IIQNIGKYFMMMYIVFSKPEKWRIFRRRFFEEMEIIGIKSIPIVALMSAFMGAVIALQTA 62 Query: 188 FQLSQFGAEIFSIDLMSILQ-LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 + +++ ++ + E + ++++AG+ GS I +E+G+M++ E+IDA+ Sbjct: 63 SNMDNPLLPAYTVGFITRSSTILEFSPTIISLILAGKVGSNIASEVGTMRVTEQIDALEI 122 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 MG++ + L+ P++ + +I P+L I + ++IG Sbjct: 123 MGVNSLSYLVLPKVTSAMIFFPILIIFSIGLSLIGG 158 >gi|271964523|ref|YP_003338719.1| resistance to organic solvents ABC transporter permease [Streptosporangium roseum DSM 43021] gi|270507698|gb|ACZ85976.1| ABC-type transport system involved in resistance to organic solvents permease component-like protein [Streptosporangium roseum DSM 43021] Length = 288 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 55/189 (29%), Positives = 92/189 (48%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V ++F GA + QG L GAE F + S +REI ++ AV +A + GS+ Sbjct: 79 VAFTMAFAVGATVGLQGYQGLQAIGAESFIGLVGSFANVREITPIIAAVALAAQVGSSFT 138 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AE+G+M+I+EEIDA+ M ++ LI R+ A +I+L + ++A F++ ++ Sbjct: 139 AELGAMRISEEIDALEVMAINAFTYLICTRVVAALIALVPVYLIALFASFFATRLMCTVL 198 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 + + V+ F+ L +I +IK A A+ + GF +G Sbjct: 199 FGMSPGVYDYYFYLGLPLIDIVYSVIKVIVFAFAVISIHCYYGFNATGGPVGVGTAAGRA 258 Query: 350 VVQSISIVI 358 + QSI VI Sbjct: 259 IRQSIVTVI 267 >gi|88803715|ref|ZP_01119239.1| hypothetical protein PI23P_00445 [Polaribacter irgensii 23-P] gi|88780448|gb|EAR11629.1| hypothetical protein PI23P_00445 [Polaribacter irgensii 23-P] Length = 246 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 7/139 (5%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 KF F +L++++ +G+ + +++ ISF G VIA Q A L + L+ Sbjct: 23 KFHIFYTALMKEIEDLGLKSIGIIMFISFFIGGVIALQTALNLD---SPFIPDSLIGFAA 79 Query: 208 LR----EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263 R E +++AG+ GS I + IG+M++ E+IDA+ MG++ + L+ P+I A Sbjct: 80 KRSIILEFAPTFCCIILAGKVGSYITSSIGAMRVTEQIDALEVMGINALNFLVLPKILAA 139 Query: 264 IISLPLLTILANFSAIIGA 282 + P L ILA I G Sbjct: 140 LFFYPFLIILAMVLGIFGG 158 >gi|269958397|ref|YP_003328184.1| putative ABC transporter [Anaplasma centrale str. Israel] gi|269848226|gb|ACZ48870.1| putative ABC transporter [Anaplasma centrale str. Israel] Length = 259 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 69/252 (27%), Positives = 122/252 (48%), Gaps = 20/252 (7%) Query: 130 HILGLVI--SNTGEFCASSYKFKGFLLSLI-----RQMYYVGVSGVPVVILISFVTGAVI 182 + +GL+I FCA S +G L RQ + + +P+V + + TG + Sbjct: 14 YFIGLIIPVGRMSVFCAQS-VMRGILPPYYFPIAARQFFEMWFFSLPIVGMTALFTGGAL 72 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 Q A F ++++ +RE+G +L +++AGR G+A+ AEIG+M+I E+ID Sbjct: 73 VLQDTLVGGGKVAAHFMAGIVTVATVRELGPVLIGLIVAGRVGAAVAAEIGTMRITEQID 132 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV--IWKYYD----IPFAV 296 A+ T+ + + L+ PR+ AL+I++P+L + +F I G V + YD + Sbjct: 133 ALDTLEANPFQYLVMPRVIALMIAMPVLIVYTDFLGIFGGYAVGTLGLGYDSNEYLGGVA 192 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 F F A GL+KA I +V G+ + +G T VV S + Sbjct: 193 EFLHFKDVA------EGLVKAVSFGFVISLVGCYSGYYCSGGARGVGVATTNTVVASSML 246 Query: 357 VIIIDSLFAIFY 368 +++++ + +FY Sbjct: 247 IVLLNYVITVFY 258 >gi|296141463|ref|YP_003648706.1| hypothetical protein Tpau_3789 [Tsukamurella paurometabola DSM 20162] gi|296029597|gb|ADG80367.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM 20162] Length = 272 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 51/187 (27%), Positives = 98/187 (52%), Gaps = 2/187 (1%) Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 IL++ GAV++ Q + GA I +R+ L T V++ G SAI A+ Sbjct: 67 ILVAVPFGAVVSVQVGALVDTVGANSLVGAASGIGIIRQGAPLATGVLLGGVCASAIAAD 126 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI-LANFSAIIGASIVIWKYY 290 +GS + EE+ A++ MG+D + LI+PR+ AL+I P+L + + + ++ ++ +W+ + Sbjct: 127 LGSRTVREELQAMQVMGVDPIARLIAPRMLALMIIAPMLLVAIVAVAMMVALTVSVWQ-F 185 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 + F+S F + + +++ ++KA A +G+VA G + V + V Sbjct: 186 GLSSGGFWSSFGAFSAPSDLAFAVLKAETGAMIVGLVAGLRGLEASGGPRGVADGVNSSV 245 Query: 351 VQSISIV 357 V SI+++ Sbjct: 246 VLSITLI 252 >gi|260203312|ref|ZP_05770803.1| hypothetical protein MtubK8_03235 [Mycobacterium tuberculosis K85] gi|289572747|ref|ZP_06452974.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis K85] gi|289537178|gb|EFD41756.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis K85] Length = 265 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 59/208 (28%), Positives = 97/208 (46%), Gaps = 32/208 (15%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P+ +L+ F ++AQ GA +S GA I ++ ++G L T +++AG +A Sbjct: 66 IPLTVLLIFTLNILLAQFGAADISGSGAAIGAVT--------QLGPLTTVLVVAGAGSTA 117 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ I EEIDA+ +G+D + L+ PR+ A ++ LL L ++G + Sbjct: 118 ICADLGARTIREEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNSLVITVGLVGGFL--- 174 Query: 288 KYYDIPFAVFFSRFHSTATLA--NIFTGL-------IKAPFMACAIGIVAMKEGFAVGVH 338 F V+ A LA + TGL IKA G+V G V Sbjct: 175 ------FGVYLQNVSGGAYLATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGG 228 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAI 366 S LG V ++V+ + +LFA+ Sbjct: 229 SKGLGTAVNE------TVVLCVIALFAV 250 >gi|120401386|ref|YP_951215.1| hypothetical protein Mvan_0361 [Mycobacterium vanbaalenii PYR-1] gi|119954204|gb|ABM11209.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 256 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 86/172 (50%) Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L +FGA F+ +I + +IG ++T ++++G +A+ A++G+ I EE+DA++ MG+ Sbjct: 72 LKEFGAADFAGTGAAIGTVSQIGPIVTVLVVSGAGATAMCADLGARTIREELDAMKVMGI 131 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 + ++ L+ PR+ A L+ + + GA ++ F S A+ Sbjct: 132 NPIQALVVPRVLAATTVALALSATVIIAGLAGAFFFCVFVQNVSAGAFISGMTLLTGAAD 191 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 +F L KA A G++A +G +VG +G V VV + ++ I+ Sbjct: 192 VFVSLAKATLFGLAAGLIACYKGISVGGGPAGVGNAVNETVVFTFMVLFAIN 243 >gi|300783703|ref|YP_003763994.1| ABC transporter permease [Amycolatopsis mediterranei U32] gi|299793217|gb|ADJ43592.1| ABC transport system permease protein [Amycolatopsis mediterranei U32] Length = 264 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 4/198 (2%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 LI+Q +++ + L+S GAVIA +Q GA+ F+ + +++ ++ Sbjct: 43 LIQQFWFIASVSILPTALVSIPFGAVIALHIGSLTTQIGAQSFTGAASVLAIIQQASPIV 102 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++IAG GSA+ A++GS I EEIDA+ +G+ V+ LI PR+ A + L + + Sbjct: 103 TALLIAGAGGSAMCADLGSRTIREEIDAMEVLGVSPVQRLIVPRVLAAMGVAVFLNGMVS 162 Query: 276 FSAIIGASI--VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 ++G VI + + P A + + F + A L +++ IKA G+VA G Sbjct: 163 VVGVLGGYFFNVIMQ-HGTPGA-YLASFSALAQLPDLWISEIKALIFGFVAGVVASYRGL 220 Query: 334 AVGVHSNSLGKKVTTCVV 351 +G V VV Sbjct: 221 NPKGGPKGVGDAVNQSVV 238 >gi|118462658|ref|YP_881590.1| hypothetical protein MAV_2390 [Mycobacterium avium 104] gi|118163945|gb|ABK64842.1| conserved hypothetical protein [Mycobacterium avium 104] Length = 286 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 55/212 (25%), Positives = 100/212 (47%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 +RQ ++ + V IL+S ++ Q A Q GA + + +R+ L+ Sbjct: 66 VRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGATSLAGAASGLAVIRQGASLVA 125 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV++A GSAI A++GS + EE DA+ MG+ VR L+ PR A ++ LT + F Sbjct: 126 AVLMASAVGSAITADLGSRTMREETDAMEVMGVSVVRRLVVPRFAAAVMIGVALTGVVCF 185 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + + + + + F S S AT ++ L+KA + IV+ ++G + Sbjct: 186 AGFFASYMFNVYFQNGAPGSFVSTSASFATTGDMILALLKAIVFGAIVAIVSSQKGLSTK 245 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + V VV++I +++I++ + Y Sbjct: 246 GGPTGVANSVNAAVVEAILLLMIVNVAISQLY 277 >gi|326331738|ref|ZP_08198026.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1] gi|325950537|gb|EGD42589.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1] Length = 257 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 63/234 (26%), Positives = 114/234 (48%), Gaps = 2/234 (0%) Query: 139 TGEFCASSYKFKGFLLSLIRQMYYV-GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 TGE ++ K L + Q +++ V+ +P V L+S GAVI+ Q Q GA+ Sbjct: 19 TGEVVKGTFTTKFQLREFLEQAWFITSVTMMPAV-LVSIPFGAVISLQVGNLAGQLGAQS 77 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 F+ + +RE + A++IAG +GSAI +++GS KI EEIDA+ +G+D V L+ Sbjct: 78 FAGATAVLAVVREAAPMAAALIIAGAAGSAICSDMGSRKIREEIDAMEVLGIDPVVRLVI 137 Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 PR+ A + ++ + + I G F S F + A+L +++ ++K+ Sbjct: 138 PRVLACLFVSVMINGIVIATGIGGGYFFTVIVQGGSAGAFLSSFTALASLPDLYISMVKS 197 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 I+ G + +G+ V V+ + ++ +++S+ YF I Sbjct: 198 ALFGFLAAIIGAYNGLNAQGGPSGVGRAVNEAVIIAFMMLFVLNSIMTAVYFQI 251 >gi|15607308|ref|NP_214681.1| integral membrane protein YRBE1A [Mycobacterium tuberculosis H37Rv] gi|15839545|ref|NP_334582.1| hypothetical protein MT0176 [Mycobacterium tuberculosis CDC1551] gi|31791345|ref|NP_853838.1| integral membrane protein YRBE1A [Mycobacterium bovis AF2122/97] gi|121636079|ref|YP_976302.1| integral membrane protein YrbE1a [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148659931|ref|YP_001281454.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis H37Ra] gi|148821359|ref|YP_001286113.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis F11] gi|167970287|ref|ZP_02552564.1| hypothetical integral membrane protein yrbE1A [Mycobacterium tuberculosis H37Ra] gi|215406160|ref|ZP_03418341.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis 02_1987] gi|215414032|ref|ZP_03422691.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis 94_M4241A] gi|215448446|ref|ZP_03435198.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis T85] gi|218755901|ref|ZP_03534697.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis GM 1503] gi|224988552|ref|YP_002643239.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253797089|ref|YP_003030090.1| hypothetical protein TBMG_00168 [Mycobacterium tuberculosis KZN 1435] gi|254233556|ref|ZP_04926882.1| hypothetical integral membrane protein yrbE1A [Mycobacterium tuberculosis C] gi|254366619|ref|ZP_04982663.1| hypothetical integral membrane protein yrbE1A [Mycobacterium tuberculosis str. Haarlem] gi|254549106|ref|ZP_05139553.1| hypothetical protein Mtube_01351 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185030|ref|ZP_05762504.1| hypothetical protein MtubCP_03112 [Mycobacterium tuberculosis CPHL_A] gi|289445698|ref|ZP_06435442.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis CPHL_A] gi|289552419|ref|ZP_06441629.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis KZN 605] gi|289747934|ref|ZP_06507312.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis 02_1987] gi|289760269|ref|ZP_06519647.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|289764283|ref|ZP_06523661.1| hypothetical integral membrane protein yrbE1A [Mycobacterium tuberculosis GM 1503] gi|294994641|ref|ZP_06800332.1| hypothetical protein Mtub2_09017 [Mycobacterium tuberculosis 210] gi|297632645|ref|ZP_06950425.1| hypothetical protein MtubK4_00901 [Mycobacterium tuberculosis KZN 4207] gi|297729620|ref|ZP_06958738.1| hypothetical protein MtubKR_00931 [Mycobacterium tuberculosis KZN R506] gi|298527559|ref|ZP_07014968.1| YrbE1A [Mycobacterium tuberculosis 94_M4241A] gi|306774257|ref|ZP_07412594.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu001] gi|306779001|ref|ZP_07417338.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu002] gi|306782789|ref|ZP_07421111.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu003] gi|306787156|ref|ZP_07425478.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu004] gi|306791712|ref|ZP_07430014.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu005] gi|306795756|ref|ZP_07434058.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu006] gi|306801752|ref|ZP_07438420.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu008] gi|306805963|ref|ZP_07442631.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu007] gi|306970359|ref|ZP_07483020.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu009] gi|306974591|ref|ZP_07487252.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu010] gi|307082300|ref|ZP_07491470.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu011] gi|307082645|ref|ZP_07491758.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu012] gi|313656946|ref|ZP_07813826.1| hypothetical protein MtubKV_00916 [Mycobacterium tuberculosis KZN V2475] gi|2213504|emb|CAB09750.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE1A [Mycobacterium tuberculosis H37Rv] gi|13879657|gb|AAK44396.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|31616930|emb|CAD93037.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE1A [Mycobacterium bovis AF2122/97] gi|110348076|gb|ABG72765.1| YrbE1A [Expression vector yrbE1AB] gi|121491726|emb|CAL70188.1| Conserved hypothetical integral membrane protein yrbE1A [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124603349|gb|EAY61624.1| hypothetical integral membrane protein yrbE1A [Mycobacterium tuberculosis C] gi|134152131|gb|EBA44176.1| hypothetical integral membrane protein yrbE1A [Mycobacterium tuberculosis str. Haarlem] gi|148504083|gb|ABQ71892.1| conserved hypothetical integral membrane protein YrbE1a [Mycobacterium tuberculosis H37Ra] gi|148719886|gb|ABR04511.1| hypothetical integral membrane protein yrbE1A [Mycobacterium tuberculosis F11] gi|224771665|dbj|BAH24471.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253318592|gb|ACT23195.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis KZN 1435] gi|289418656|gb|EFD15857.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis CPHL_A] gi|289437051|gb|EFD19544.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis KZN 605] gi|289688462|gb|EFD55950.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis 02_1987] gi|289711789|gb|EFD75805.1| hypothetical integral membrane protein yrbE1A [Mycobacterium tuberculosis GM 1503] gi|289715833|gb|EFD79845.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|298497353|gb|EFI32647.1| YrbE1A [Mycobacterium tuberculosis 94_M4241A] gi|308217091|gb|EFO76490.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu001] gi|308328029|gb|EFP16880.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu002] gi|308332309|gb|EFP21160.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu003] gi|308336191|gb|EFP25042.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu004] gi|308339691|gb|EFP28542.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu005] gi|308343698|gb|EFP32549.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu006] gi|308347571|gb|EFP36422.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu007] gi|308351470|gb|EFP40321.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu008] gi|308352197|gb|EFP41048.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu009] gi|308356146|gb|EFP44997.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu010] gi|308360101|gb|EFP48952.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu011] gi|308367649|gb|EFP56500.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu012] gi|323717156|gb|EGB26365.1| hypothetical protein TMMG_00596 [Mycobacterium tuberculosis CDC1551A] gi|326905924|gb|EGE52857.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis W-148] gi|328456876|gb|AEB02299.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis KZN 4207] gi|328864228|gb|AEB53197.1| conserved integral membrane protein YRBE1A [Mycobacterium tuberculosis] Length = 265 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 59/208 (28%), Positives = 97/208 (46%), Gaps = 32/208 (15%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P+ +L+ F ++AQ GA +S GA I ++ ++G L T +++AG +A Sbjct: 66 IPLTVLLIFTLNILLAQFGAADISGSGAAIGAVT--------QLGPLTTVLVVAGAGSTA 117 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ I EEIDA+ +G+D + L+ PR+ A ++ LL L ++G + Sbjct: 118 ICADLGARTIREEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFL--- 174 Query: 288 KYYDIPFAVFFSRFHSTATLA--NIFTGL-------IKAPFMACAIGIVAMKEGFAVGVH 338 F V+ A LA + TGL IKA G+V G V Sbjct: 175 ------FGVYLQNVSGGAYLATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGG 228 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAI 366 S LG V ++V+ + +LFA+ Sbjct: 229 SKGLGTAVNE------TVVLCVIALFAV 250 >gi|215425374|ref|ZP_03423293.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis T92] gi|215433087|ref|ZP_03431006.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis EAS054] gi|219555965|ref|ZP_03535041.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis T17] gi|260199170|ref|ZP_05766661.1| hypothetical protein MtubT4_03250 [Mycobacterium tuberculosis T46] gi|289441542|ref|ZP_06431286.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis T46] gi|289568066|ref|ZP_06448293.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis T17] gi|289748643|ref|ZP_06508021.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis T92] gi|289756232|ref|ZP_06515610.1| integral membrane protein [Mycobacterium tuberculosis EAS054] gi|289414461|gb|EFD11701.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis T46] gi|289541819|gb|EFD45468.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis T17] gi|289689230|gb|EFD56659.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis T92] gi|289696819|gb|EFD64248.1| integral membrane protein [Mycobacterium tuberculosis EAS054] Length = 265 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 59/208 (28%), Positives = 97/208 (46%), Gaps = 32/208 (15%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P+ +L+ F ++AQ GA +S GA I ++ ++G L T +++AG +A Sbjct: 66 IPLTVLLIFTLNILLAQFGAADISGSGAAIGAVT--------QLGPLTTVLVVAGAGSTA 117 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ I EEIDA+ +G+D + L+ PR+ A ++ LL L ++G + Sbjct: 118 ICADLGARTIREEIDAMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFL--- 174 Query: 288 KYYDIPFAVFFSRFHSTATLA--NIFTGL-------IKAPFMACAIGIVAMKEGFAVGVH 338 F V+ A LA + TGL IKA G+V G V Sbjct: 175 ------FGVYLQNVSGGAYLATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGG 228 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAI 366 S LG V ++V+ + +LFA+ Sbjct: 229 SKGLGTAVNE------TVVLCVIALFAV 250 >gi|325954854|ref|YP_004238514.1| hypothetical protein Weevi_1232 [Weeksella virosa DSM 16922] gi|323437472|gb|ADX67936.1| protein of unknown function DUF140 [Weeksella virosa DSM 16922] Length = 250 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 17/216 (7%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDL----- 202 KFK F +IR++ +G+S + +V IS GAV+A Q A G+EI D Sbjct: 25 KFKYFWKLIIREVMDLGMSSLGIVTFISTFMGAVVAIQMAQNFR--GSEIPVPDAYIGYA 82 Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 ++ + E + ++++AG+ GS I + IG+M++ E+IDA+ MG++ LI P+I A Sbjct: 83 TKVVLVLEFSPTIVSLILAGKVGSYIASSIGTMRVTEQIDALDVMGINSPNFLILPKIIA 142 Query: 263 LIISLPLLTILANFSAIIGASIV-----IWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 + P L ++ I+G ++ +W D F L K Sbjct: 143 CVFFFPFLIAISIGFGILGGHLIGVFTKMWAPVD-----FVQGLQMGMALKFYIYTFFKT 197 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 A I V G+ V S +G+ TT VV + Sbjct: 198 MVFAFVIATVPAYYGYYVSGGSLEVGRSSTTAVVWT 233 >gi|289642564|ref|ZP_06474707.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] gi|289507652|gb|EFD28608.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] Length = 285 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 48/192 (25%), Positives = 93/192 (48%), Gaps = 2/192 (1%) Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 A I+ +G + L Q GA ++ ++ + + ++A + G +VAE+GSM+I+E Sbjct: 86 AEISLEGHYLLRQLGAGGYTAVFTAVSDY-TVAPEMWGWILAAKVGCGLVAELGSMRISE 144 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILA-NFSAIIGASIVIWKYYDIPFAVFF 298 EIDA+ MGLD + L+S R+ A+II P + I I+ + + ++ + + Sbjct: 145 EIDALEVMGLDSMSYLVSARLLAVIIVTPFMFIAGTGIMYIVNYVLNVHVFHSVTQGAYL 204 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 S F + T ++ L+ M I ++ G+ +GK +V ++ IV Sbjct: 205 SVFWTFLTQTDVLLSLVAGGIMGTMIVLIGCFYGYTASGGPVGVGKNTAKSMVINLIIVS 264 Query: 359 IIDSLFAIFYFA 370 ++ ++F +F Sbjct: 265 VVGAIFQQLFFG 276 >gi|145222687|ref|YP_001133365.1| hypothetical protein Mflv_2099 [Mycobacterium gilvum PYR-GCK] gi|315443151|ref|YP_004076030.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|145215173|gb|ABP44577.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] gi|315261454|gb|ADT98195.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 255 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 82/162 (50%) Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L++FGA FS ++ +R+IG ++T +++AG +A+ A++G+ I EE+DA+R MG+ Sbjct: 72 LTEFGAADFSGTGAALGTVRQIGPIVTVLVVAGAGATAMCADLGARTIREELDALRVMGV 131 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 + ++ L+ PR+ A + L+ + GA ++ F + + Sbjct: 132 NPIQALVVPRVLAATLVSLALSATVILVGLAGAYFFCVYIQNVSPGAFAAGLTLIIGATD 191 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 + L+KA + G++A +G +VG +G V VV Sbjct: 192 VIIALVKAALFGLSAGMIACYKGISVGGGPAGVGNAVNETVV 233 >gi|302523958|ref|ZP_07276300.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4] gi|302432853|gb|EFL04669.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4] Length = 262 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 62/218 (28%), Positives = 111/218 (50%), Gaps = 14/218 (6%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 ++F+ F I+Q ++V + L++ GAVI+ Q Q GA+ ++ + Sbjct: 35 PFQFREF----IQQAWFVASVTILPTALVAIPFGAVISLQFGALARQLGAQSYTGAGSVL 90 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 +++ L+TA+++AG GSA+ A+IG+ I EEIDA+ +G+ V+ LI PR A+++ Sbjct: 91 ATVQQASPLVTALLVAGAGGSAVCADIGARTIREEIDAMEVLGVSAVQRLIVPRTLAMML 150 Query: 266 SLPLLTILANFSAIIGA---SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322 LL + + ++G ++V+ P A + S F + A L +++ G IKA Sbjct: 151 VALLLNGMVSVIGVLGGYFFNVVLQG--GTPGA-YLSSFSALAQLPDLWVGEIKALIFGF 207 Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 +VA G+H + K V V QS+ I ++ Sbjct: 208 IAAVVAAYR----GLHPSGGPKGVGDAVNQSVVITFLL 241 >gi|223937195|ref|ZP_03629102.1| protein of unknown function DUF140 [bacterium Ellin514] gi|223894217|gb|EEF60671.1| protein of unknown function DUF140 [bacterium Ellin514] Length = 311 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/211 (22%), Positives = 101/211 (47%), Gaps = 5/211 (2%) Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 GV +P+ + +S G V+ Q L++ A + +M ++ +REIG +LTA+++ R Sbjct: 103 GVKLLPMFLFLSLAMGLVVIGQAVSWLTRVNAVQYLGTIMVLVVVREIGPMLTALLVLAR 162 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 +G++ V E+G+ + E++A+ + +D + L+ PR+ + I + LT+ +++ S Sbjct: 163 AGTSNVIELGTARALGEVEALEALVIDPIHYLVMPRVIGMAIGVFSLTVYFILGSLL--S 220 Query: 284 IVIWKYY-DIPFAV--FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 +W + D+P +F + + + K+ I ++ G A + Sbjct: 221 GYMWAFLQDVPLRPTDYFEQLAGALSYTDFIVLGTKSILFGVIISVITCYHGLAQPLQLE 280 Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 + V QS+ + +D+LF + Y + Sbjct: 281 EVSNATVRAVAQSVIACVALDALFIVIYLVL 311 >gi|120404938|ref|YP_954767.1| hypothetical protein Mvan_3984 [Mycobacterium vanbaalenii PYR-1] gi|119957756|gb|ABM14761.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 257 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 84/172 (48%) Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L++FGA FS +I + +IG ++T ++++G +A+ A++G+ I +E+DA+R MG+ Sbjct: 73 LNEFGASDFSGTGAAIGTVNQIGPIVTVLVVSGAGATAMCADLGARTIRDELDALRVMGI 132 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 + V+ L+ PR+ A L+ + GA + + F S + Sbjct: 133 NPVQALVVPRVLAATTVALALSASVIIVGLAGAFLFCVYVQHVSAGAFISGLTLLTGAGD 192 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + LIKA A G++A +G VG +G V VV + ++ I+ Sbjct: 193 VVVSLIKATLFGAAAGLIACYKGVYVGGGPAGVGNAVNETVVFTFMVLFAIN 244 >gi|189502390|ref|YP_001958107.1| hypothetical protein Aasi_1030 [Candidatus Amoebophilus asiaticus 5a2] gi|189497831|gb|ACE06378.1| hypothetical protein Aasi_1030 [Candidatus Amoebophilus asiaticus 5a2] Length = 229 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 45/135 (33%), Positives = 74/135 (54%), Gaps = 7/135 (5%) Query: 149 FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEI---FSIDLMS 204 +K + I + +G+ + +V ++S GAV Q ++ L S F + F + M Sbjct: 8 WKTYFQQTIDECINIGICSITIVSIVSIFIGAVTCIQISYNLKSPFAQDFLVGFGVRNMV 67 Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264 IL+L + A++ AG+ GS I +++GSM+I E+IDA+ MG++ L+ P+I A I Sbjct: 68 ILELAPT---VMAIIFAGKVGSNIASQLGSMRITEQIDALEVMGINPTTYLVLPKIIASI 124 Query: 265 ISLPLLTILANFSAI 279 PLL IL+ AI Sbjct: 125 FMYPLLVILSGSLAI 139 >gi|296163926|ref|ZP_06846562.1| integral membrane protein YrbE2a [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900707|gb|EFG80077.1| integral membrane protein YrbE2a [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 243 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/235 (24%), Positives = 110/235 (46%), Gaps = 24/235 (10%) Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVS-------GVPVVILISFVTGAVIAQQGAFQLS 191 TG+ A ++++ F+L + + +GVS +P+ +LI F ++A+ GA +S Sbjct: 11 TGKALARPFQWREFIL---QGWFLLGVSFLPTVMVAIPLTVLIIFTLNILLAEFGAADVS 67 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 GA + ++ ++G L+T +++AG +AI A++G+ I EEIDA+ +G+D Sbjct: 68 GAGAALGAVT--------QLGPLVTVLVVAGAGSTAICADLGARTIREEIDAMEVLGIDP 119 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 + L+ PR+ A I LL ++G + ++ + S L + Sbjct: 120 IHRLVVPRVVASTIVALLLNGAVISIGLVGGFLFGVYIQNVSAGAYVSTLTLITGLPEVL 179 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 ++KA G+V G G + +G V ++V+ + +LFA+ Sbjct: 180 ISIVKATLFGLIAGLVGCYRGLTAGGGAKGVGTAVNE------TLVLAVVALFAV 228 >gi|300789441|ref|YP_003769732.1| ABC transporter permease [Amycolatopsis mediterranei U32] gi|299798955|gb|ADJ49330.1| ABC transport system permease protein [Amycolatopsis mediterranei U32] Length = 264 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 59/227 (25%), Positives = 108/227 (47%), Gaps = 10/227 (4%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 Y+ + F+L Q +++ + IL+S GAVI+ Q SQ GA+ F+ + Sbjct: 37 PYQVREFVL----QFWFIASVSITPAILVSIPFGAVISLQLGSLTSQIGAQQFNGAASVL 92 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 +++ ++T ++IAG GSAI A++G+ I EEI A+ +G+ + L+ PR+ A + Sbjct: 93 AVVQQASPIVTTLIIAGAGGSAICADLGARSIREEIAAMEVLGVSPIHRLVVPRVQAAVG 152 Query: 266 SLPLLTILANFSAIIGA---SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322 LL L + ++G ++I P A + + F++ A L ++ IKA Sbjct: 153 VSVLLNGLVSVVGVLGGYFFGVIIQG--GTPGA-YLASFNALAQLPDLVVSSIKAVIFGY 209 Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 G+VA G +G V VV + ++ ++++ Y Sbjct: 210 LAGVVAAYRGLNPKGGPKGVGDVVNQSVVITFLLLFFVNTVLTALYL 256 >gi|229494293|ref|ZP_04388056.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] gi|229318655|gb|EEN84513.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] Length = 281 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 6/201 (2%) Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G V V+ ISF G+ I +G L+ G S + +I RE+ L+ A+ +A + Sbjct: 65 GGGSVVVIFAISFFAGSQIGLEGYRGLNLVGLAPLSGVMSAIANTREVAPLVAAITLAAK 124 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR-IWALIISLP--LLTILANFSAII 280 G+ A++G+M+I+EEIDA+ M + +R L++ R I ALI +P L+ + A++ A Sbjct: 125 VGTGFTAQLGAMRISEEIDALEVMAIPSLRYLVTTRMIAALIAVVPLYLVGLFASYMATA 184 Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 A I + + + +FS F S +I+ LIK A + +V G+ Sbjct: 185 LAVIRVKGQSEGTYGYYFSLFLSP---NDIWLSLIKVMVFAVVVTLVHCYYGYTATGGPE 241 Query: 341 SLGKKVTTCVVQSISIVIIID 361 +G+ + SI + D Sbjct: 242 GVGRAAGRALRTSIVFLAFTD 262 >gi|291515429|emb|CBK64639.1| ABC-type transport system involved in resistance to organic solvents, permease component [Alistipes shahii WAL 8301] Length = 247 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 15/214 (7%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSILQLREIGVL 214 +I +M +GV+ + + +IS GAVI Q L S F + E Sbjct: 32 IIFEMESLGVNSIGLTAIISVFIGAVITLQMCINLDSPFIPRSLVGYATRETMILEFSSA 91 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 + A+++AG+ GS+I +EIG+M+I E+IDA+ MG++ LI P+I A ++ P LTIL+ Sbjct: 92 VVALILAGKVGSSIASEIGTMRITEQIDALEIMGVNSASYLILPKIVAAMVFFPFLTILS 151 Query: 275 NFSAIIGA-------SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327 I+G I+I Y + F + T T LIK F A I + Sbjct: 152 ILIGILGGYLIAAATGIMIPADYVDGLLMDFKPYSITYT-------LIKTVFFAYIITSI 204 Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + G+ +S +G T VV S ++++ D Sbjct: 205 SAFYGYNARGNSLEVGTASTRAVVASCVVILLFD 238 >gi|326330431|ref|ZP_08196739.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1] gi|325951706|gb|EGD43738.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1] Length = 256 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 2/156 (1%) Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 LREI T + +AG G+A+ A++G+ KI EE+DA +G+D +R L+ PR+ A+ + Sbjct: 84 SLREISPFATGMAVAGVMGTAMTADLGARKIREELDAFTVLGIDAIRTLVLPRVIAITVM 143 Query: 267 LPLLTILANFSAIIGASI-VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325 + I+ + + A I W P A F + T+ + +K + IG Sbjct: 144 MVAFNIVGSLLGMSMAMISATWLGTTSPGA-FLGNLLGSMTVPELVGTTVKCTLIGLFIG 202 Query: 326 IVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 +V+ ++G + +G+ V VV S + V + + Sbjct: 203 VVSAQKGLNAKGGAEGVGRAVNEAVVLSFAAVWVAN 238 >gi|226361938|ref|YP_002779716.1| YrbE family protein [Rhodococcus opacus B4] gi|226240423|dbj|BAH50771.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 267 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 8/184 (4%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L+ F ++ + GA LS GA + ++ +IG L+T +++AG +A Sbjct: 68 LPFTVLVVFTLNILLVEFGAADLSGAGAGLGAVT--------QIGPLVTVLIVAGAGATA 119 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ I EEIDAIR +G+D ++ L+ PR+ A + LL L + G + Sbjct: 120 ICADLGARTIREEIDAIRVLGIDPIQRLVVPRVLASMFVAVLLNGLVITIGLTGGFLFSV 179 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 ++ + S L + +KA G+VA G V S+G V Sbjct: 180 YIQNVTPGAYVSSLTFVTGLPEVIISEVKATLFGLIAGLVACHRGLTVKGGPKSVGDAVN 239 Query: 348 TCVV 351 VV Sbjct: 240 ETVV 243 >gi|226304167|ref|YP_002764125.1| YrbE family protein [Rhodococcus erythropolis PR4] gi|226183282|dbj|BAH31386.1| putative YrbE family protein [Rhodococcus erythropolis PR4] Length = 281 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 6/201 (2%) Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G V V+ ISF G+ I +G L+ G S + +I RE+ L+ A+ +A + Sbjct: 65 GGGSVVVIFAISFFAGSQIGLEGYRGLNLVGLAPLSGVMSAIANTREVAPLVAAITLAAK 124 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR-IWALIISLP--LLTILANFSAII 280 G+ A++G+M+I+EEIDA+ M + +R L++ R I ALI +P L+ + A++ A Sbjct: 125 VGTGFTAQLGAMRISEEIDALEVMAIPSLRYLVTTRMIAALIAVVPLYLVGLFASYMATA 184 Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 A I + + + +FS F S +I+ LIK A + +V G+ Sbjct: 185 LAVIRVKGQSEGTYGYYFSLFLSP---NDIWLSLIKVMVFAVVVTLVHCYYGYTATGGPE 241 Query: 341 SLGKKVTTCVVQSISIVIIID 361 +G+ + SI + D Sbjct: 242 GVGRAAGRALRTSIVFLAFTD 262 >gi|298372676|ref|ZP_06982666.1| membrane protein [Bacteroidetes oral taxon 274 str. F0058] gi|298275580|gb|EFI17131.1| membrane protein [Bacteroidetes oral taxon 274 str. F0058] Length = 248 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 73/136 (53%), Gaps = 1/136 (0%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDL-MSIL 206 ++ F L ++ +G++ V +++LIS G ++ Q +S L + Sbjct: 25 NWRVFWRQLPSEIEKLGINTVGIIVLISIFMGVIMTMQTVMNTENPMLPRYSTGLVLRDT 84 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 L E + ++++AG+ GS I +EIG+M+I E+IDA+ MG++ LI P+I L+I Sbjct: 85 LLLEFSSTIMSLLLAGKVGSNIASEIGTMRITEQIDALDIMGINSANYLILPKIIGLMIC 144 Query: 267 LPLLTILANFSAIIGA 282 +P+L L+ F + G Sbjct: 145 MPMLVTLSVFLGLAGG 160 >gi|313677561|ref|YP_004055557.1| hypothetical protein Ftrac_3477 [Marivirga tractuosa DSM 4126] gi|312944259|gb|ADR23449.1| protein of unknown function DUF140 [Marivirga tractuosa DSM 4126] Length = 243 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 29/233 (12%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSIL 206 F + I + +G + + +V + S GAV Q A+ L S + + Sbjct: 20 SFSSYFKLTINECISIGWNSILIVAITSTFMGAVTTVQTAYNLVSPLIQNYVVAQVTREM 79 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 + E+ +TA++IAG+ GS+I +G+M+I E+IDA+ MG++ L+ P+I A +I Sbjct: 80 VVLELAPTITAIVIAGKVGSSIAGGLGTMRITEQIDALEVMGVNASSYLVLPKIVAAMIM 139 Query: 267 LPLLTILANFSAIIGASIV---------IWKYYDI-----PFAVFFSRFHSTATLANIFT 312 PLL ++A F A+ G I Y I PF V F+ Sbjct: 140 YPLLVVIAGFLALYGGYIAGTLTGILTETEYVYGIRIDFNPFTVQFA------------- 186 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 LIK+ A I ++ +GF + +G+ T+ V +S V++ D + A Sbjct: 187 -LIKSLVFAFLIASISAFQGFFTTGGALEVGQSSTSAVTKSCIAVLLADYILA 238 >gi|54022502|ref|YP_116744.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54014010|dbj|BAD55380.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 263 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 8/184 (4%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L+SF ++ + GA LS GA ++ ++G ++T +++AG +A Sbjct: 65 IPFTVLVSFTLNILLREIGAADLSGAGAAFGAVT--------QVGPIVTVLIVAGAGATA 116 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ I EEIDA+R +G++ V+ L+ PR+ A + +L L I+G + Sbjct: 117 ICADLGARTIREEIDAMRVLGINPVQRLVVPRVLASMFVALMLNSLVCTIGIVGGFLFSV 176 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 D+ F + L + +KA G+VA G V S+G V Sbjct: 177 YLQDVNPGAFVNGITLLTHLPELIISEVKAGLFGLIAGLVACYLGLNVKGGPKSVGDAVN 236 Query: 348 TCVV 351 VV Sbjct: 237 QTVV 240 >gi|120403834|ref|YP_953663.1| hypothetical protein Mvan_2850 [Mycobacterium vanbaalenii PYR-1] gi|119956652|gb|ABM13657.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 282 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 58/201 (28%), Positives = 108/201 (53%), Gaps = 13/201 (6%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 ++++ F+T G +A QG L G E + L + + +R ++ + +A G+ Sbjct: 71 IVIVGFLTLAAGGTLAVQGYSSLGDIGIEALTGFLAAFINVRISAPVVAGIGLAATFGAG 130 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTI--LANFSAIIGASI 284 + A++G+M+INEEIDA+ TMG+ V L+S RI A +I++ PL +I + +F+A ++ Sbjct: 131 VTAQLGAMRINEEIDALETMGIRPVEYLVSTRIVAGMIAITPLYSIAVMLSFAASKLTTV 190 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG-FAVGVHSN--- 340 V++ + +F+ F + L F ++A MA A+ +V G FA G S Sbjct: 191 VLFGQSAGLYNHYFTTFLNPRDLLWSF---LQAILMAMAVLLVHTYFGYFATGGPSGVGV 247 Query: 341 SLGKKVTTCVVQSISIVIIID 361 ++G V T ++ IS+ +++ Sbjct: 248 AVGNAVRTSLIVVISVTLLVS 268 >gi|317125893|ref|YP_004100005.1| hypothetical protein Intca_2777 [Intrasporangium calvum DSM 43043] gi|315589981|gb|ADU49278.1| protein of unknown function DUF140 [Intrasporangium calvum DSM 43043] Length = 282 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 86/194 (44%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V+ ++F TG + QG L Q G F+ + REI L+ + +A G Sbjct: 71 VGVIAFMAFFTGTEVGLQGYSALEQLGTGAFTGFFSAYFNTREIAPLVAGLALAATVGCG 130 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 A++G+M+I+EE+DA+ MG+ + L++ R+ A +++ L ++ S+ + Sbjct: 131 FTAQLGAMRISEEVDALEVMGVPSLPYLVTTRMIAGFVAVVPLYVIGLLSSYAATRFIAT 190 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 Y+ + FH +IF K A I ++ G+ +G V Sbjct: 191 TYFGQSEGTYDHYFHLFLPPGDIFWSFGKVMVFAVVIILIHCYYGYTASGGPAGVGVAVG 250 Query: 348 TCVVQSISIVIIID 361 T V SI + ++D Sbjct: 251 TAVRTSIVAINVVD 264 >gi|331699196|ref|YP_004335435.1| hypothetical protein Psed_5449 [Pseudonocardia dioxanivorans CB1190] gi|326953885|gb|AEA27582.1| protein of unknown function DUF140 [Pseudonocardia dioxanivorans CB1190] Length = 259 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 111/222 (50%), Gaps = 14/222 (6%) Query: 157 IRQMYYVG-VSGVPVVIL-ISFVTGAVIAQQGAFQLSQFGAE--IFSIDLMSILQLREIG 212 I Q ++V VS +P + I F GA IA A QFGA+ + +++I+Q + Sbjct: 39 IEQTWFVTKVSALPTALFTIPF--GATIALLLAELTRQFGAQSQTGAGSVLAIVQ--QAA 94 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 ++TA++I+G GSA+ A++G+ I EEI A+ +G+ ++ L+ PR+ A+ + +L Sbjct: 95 PIVTALLISGAGGSAVCADLGARTIREEIAAMEVLGISPIQRLVVPRVLAMATTALVLNG 154 Query: 273 LANFSAIIGA---SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329 LA + G ++V+ P A + + F + A +++I +KA G+VA Sbjct: 155 LATVVGVAGGYFFNVVVQG--GTPGA-YIASFSAIAQVSDIVVSEVKAALFGFTAGVVAA 211 Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 G + +G V VV S +V +I+ + Y I Sbjct: 212 YRGLNPPPGAKGVGDAVNQAVVISFVLVFLINLILTALYLQI 253 >gi|325003316|ref|ZP_08124428.1| putative ABC-transporter integral membrane protein [Pseudonocardia sp. P1] Length = 259 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 8/221 (3%) Query: 153 LLSLIRQMYYVG-VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211 L LI Q ++V VS +P L + GA IA QFGA+ + + +++ Sbjct: 35 LRELIEQTWFVTKVSALPTA-LFTIPFGATIALLLGELTRQFGAQSQTGAGAVLAIVQQA 93 Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271 ++TA++I+G GSA+ A++G+ I EEI A+ +G+ ++ L+ PR+ A+ I+ +L Sbjct: 94 APIVTALLISGAGGSAVCADLGARTIREEIAAMEVLGISPIQRLVVPRVLAMGITAVVLN 153 Query: 272 ILANFSAIIGA---SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328 LA + G +++I + S F + A +++I IKA G+VA Sbjct: 154 GLATCVGVSGGYFFNVIIQGGSP---GAYISSFSAIAQVSDIVVSEIKAFLFGIVAGVVA 210 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 G + +G V VV S +V +I+ + Y Sbjct: 211 AYRGLNPPPGAKGVGDAVNQAVVISFVLVFLINLVLTALYL 251 >gi|311743965|ref|ZP_07717771.1| ABC superfamily ATP binding cassette transporter, membrane protein [Aeromicrobium marinum DSM 15272] gi|311313095|gb|EFQ83006.1| ABC superfamily ATP binding cassette transporter, membrane protein [Aeromicrobium marinum DSM 15272] Length = 275 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 67/109 (61%) Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 +L++ G +IA Q Q GA F+ + I LR+ L+T++++AG GSAI A+ Sbjct: 70 VLVAIPFGIIIAIQVGAVAQQIGAVSFTGAVNGIGILRQAAPLVTSLLMAGAVGSAICAQ 129 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280 +G+ + EE+DA++ MGL+ V+ +++PR+ A ++ LL + +A++ Sbjct: 130 LGAQTVREEVDAMKVMGLNPVQRIVAPRVAAAMVVGALLNVFVAATAMV 178 >gi|269124785|ref|YP_003298155.1| hypothetical protein Tcur_0520 [Thermomonospora curvata DSM 43183] gi|268309743|gb|ACY96117.1| protein of unknown function DUF140 [Thermomonospora curvata DSM 43183] Length = 262 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 56/225 (24%), Positives = 109/225 (48%), Gaps = 2/225 (0%) Query: 146 SYKFKGFLLSLIRQMYYVG-VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204 ++ + + + Q +++ V+ +PV IL++ GA +A Q +Q GA+ + + Sbjct: 31 TWDVRTWFWEFVEQCWFLARVTSIPV-ILVALPLGATVALQVGQVAAQLGAQSATGGAVI 89 Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264 + +RE+ + A++IAG GSA+ A++G+ +I +E+DA+ M ++ + L++PR+WA Sbjct: 90 VGLVREVAPIAAAMIIAGAGGSAMTADMGTRRIRDELDAMEVMAINPIHRLVTPRLWAAS 149 Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI 324 + LL L S G + D+ +F S +++ L+KA Sbjct: 150 LISTLLVSLVVLSGAAGGFVFNVLLQDVTPGAYFDGATSLLQTSDLVVTLLKAWLFGMIA 209 Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 GIVA G +G+ V +V + +V ++ + YF Sbjct: 210 GIVACYMGMNCASTPVGVGRAVNQAIVVAFLLVFALNYVITTVYF 254 >gi|296139955|ref|YP_003647198.1| hypothetical protein Tpau_2250 [Tsukamurella paurometabola DSM 20162] gi|296028089|gb|ADG78859.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM 20162] Length = 267 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 101/201 (50%), Gaps = 12/201 (5%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV-LL 215 I Q +++ + L++ GA+++ Q + Q GAE F+ S+L + + G ++ Sbjct: 47 IEQSWFIASVTILPTALVAVPFGAIVSLQTGSLIGQLGAESFT-GAASVLAVVQQGAPVV 105 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA+++AG +GSA+ A++G+ + EEI A+ +G++ V+ L+ PR+ ++ L+++ N Sbjct: 106 TALLVAGAAGSAVCADLGARTVREEIAAMEVLGINPVQRLVVPRVLGMM----LVSMFLN 161 Query: 276 FSAIIGASIVIWKY-----YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330 + + + + + P A + + F + A L ++ G KA G+VA Sbjct: 162 GLVSVVGVVGGYFFNVVLQHGTPGA-YLASFSALAQLPDLLVGEFKALVFGLIAGVVAAY 220 Query: 331 EGFAVGVHSNSLGKKVTTCVV 351 +G G +G V VV Sbjct: 221 KGLHPGGGPKGVGDAVNQSVV 241 >gi|88608548|ref|YP_506573.1| putative ABC transporter, permease protein [Neorickettsia sennetsu str. Miyayama] gi|88600717|gb|ABD46185.1| putative ABC transporter, permease protein [Neorickettsia sennetsu str. Miyayama] Length = 250 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 53/215 (24%), Positives = 110/215 (51%), Gaps = 2/215 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +I+Q++ +G +P+V + GA++A L F ++ +++ REIG ++ Sbjct: 34 IIKQLFLIGYYSMPIVAFSAVFIGAMLAFHTYTGLDLFQSQTMVAQILAKSITREIGPVV 93 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 +++AGR S I AEIG+M++ E++D +R++ ++ L+ P+I A +IS P+L I++ Sbjct: 94 VGIVVAGRVASTIAAEIGTMRVTEQVDLLRSLSINVHAYLVLPKIIAALISFPVLEIVST 153 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 ++G ++ + ++ S + T ++ G+ K+ F V+ Sbjct: 154 LFGMLGGYLIGTYKFAFSKMLYVSDTLTFLTSKDLIAGMTKSFFFGFITASVSCFNALRA 213 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSL--FAIFY 368 + +G VT VV S ++++ + L AIF+ Sbjct: 214 THGAKGVGIAVTNSVVASFVLILLSNYLITLAIFH 248 >gi|262201122|ref|YP_003272330.1| hypothetical protein Gbro_1129 [Gordonia bronchialis DSM 43247] gi|262084469|gb|ACY20437.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247] Length = 275 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 35/116 (30%), Positives = 67/116 (57%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V++L+S TG V+ QG L Q G++ + L + + RE+ L+ + ++ G Sbjct: 66 VMVLMSGFTGVVVGLQGYAALDQIGSQALTGFLSAYVNTREVAPLVAGLALSATVGCGFT 125 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 A++G+M+I+EEIDA+ TM + + L+S R+ A +++ L +L SA + + ++ Sbjct: 126 AQLGAMRISEEIDALETMAVPSIPFLVSTRVIAGFVAVIPLYVLGLLSAYLASRVI 181 >gi|145225117|ref|YP_001135795.1| hypothetical protein Mflv_4539 [Mycobacterium gilvum PYR-GCK] gi|315445484|ref|YP_004078363.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|145217603|gb|ABP47007.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] gi|315263787|gb|ADU00529.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 282 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 58/202 (28%), Positives = 106/202 (52%), Gaps = 9/202 (4%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V+++ F+T G +A QG L G E + L + + +R ++ + +A G+ Sbjct: 71 VVIVGFLTLAAGGTLAVQGYSSLGDIGIEALTGFLAAFINVRISAPVVAGIGLAATFGAG 130 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTI--LANFSAIIGASI 284 + A++G+M+INEEIDA+ TMG+ V L+S RI A +I++ PL +I + +F A ++ Sbjct: 131 VTAQLGAMRINEEIDALETMGIRPVEYLVSTRIVAGMIAIAPLYSIAVILSFLASKLTTV 190 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 V++ + +F+ F + L F ++A MA A+ +V G+ G + +G Sbjct: 191 VLFGQSAGLYNHYFTTFLNPRDLLWSF---LQAILMAMAVLLVHTYFGYFAGGGPSGVGV 247 Query: 345 KVTTCVVQSISIVIIIDSLFAI 366 V V S+ +VI + L ++ Sbjct: 248 AVGNAVRTSLIVVISVTLLVSL 269 >gi|118470268|ref|YP_889052.1| hypothetical protein MSMEG_4796 [Mycobacterium smegmatis str. MC2 155] gi|118171555|gb|ABK72451.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length = 257 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 9/195 (4%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L+SF ++ + GA LS GA ++ ++G ++T +++AG +A Sbjct: 58 IPFTVLVSFTLNILLRELGAADLSGAGAAFGAVT--------QLGPMVTVLIVAGAGATA 109 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + A++GS I EEIDA+ +G++ ++ L++PRI A + LL L I+G + Sbjct: 110 MCADLGSRTIREEIDAMEVLGINPIQRLVTPRILASGLVALLLNSLVVIIGILGGYVFSV 169 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKV 346 D+ F + + + IKA G+VA G VG + ++G V Sbjct: 170 FIQDVNPGAFAAGITLLTGVPEVIISCIKAALFGLIAGLVACYRGLTIVGGGAKAVGNAV 229 Query: 347 TTCVVQSISIVIIID 361 VV + + +I+ Sbjct: 230 NETVVYAFMALFVIN 244 >gi|118473565|ref|YP_887174.1| hypothetical protein MSMEG_2854 [Mycobacterium smegmatis str. MC2 155] gi|118174852|gb|ABK75748.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length = 281 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 106/202 (52%), Gaps = 9/202 (4%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V+++ F+T G +A QG L G E + L + + +R ++ + +A G+ Sbjct: 70 VVIVGFLTLAAGGTLAVQGYSSLGNIGIEALTGFLAAFINVRISAPVVAGIGLAATFGAG 129 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PL--LTILANFSAIIGASI 284 + A++G+M+INEEIDA+ +MG+ V L+S RI A ++++ PL + ++ +F+A ++ Sbjct: 130 VTAQLGAMRINEEIDALESMGIRPVEYLVSTRIVAGMVAITPLYAVAVILSFAASNLTTV 189 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 V++ + +FS F + L F ++A MA AI +V GF + +G Sbjct: 190 VMFGQSAGLYNHYFSTFLNPVDLLWSF---LQAILMAIAILLVHTYFGFFAAGGPSGVGV 246 Query: 345 KVTTCVVQSISIVIIIDSLFAI 366 V V S+ +VI + L ++ Sbjct: 247 AVGNAVRTSLIVVIAVTLLVSL 268 >gi|119717049|ref|YP_924014.1| hypothetical protein Noca_2825 [Nocardioides sp. JS614] gi|119537710|gb|ABL82327.1| protein of unknown function DUF140 [Nocardioides sp. JS614] Length = 279 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 46/194 (23%), Positives = 90/194 (46%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V+ ++F G + QG LSQ G FS + + RE+ L++A+ +A G Sbjct: 68 VGVIAFLAFFAGTEVGIQGYASLSQIGVAKFSAFISAYFNTREVAPLVSAIALAATVGCG 127 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 A +G+M+I+EEIDA+ MG+ + L++ R+ A +++ L ++A ++ + ++ Sbjct: 128 YTARLGAMRISEEIDALEVMGIPSLPFLVTTRMVAAFVAVIPLYVVALSASYLSPRLITT 187 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 Y + F ++ K F+A A+ ++ G+ +G V Sbjct: 188 LVYGQSPGTYDHYFLQFLPPIDMLWSFFKLLFLAAAVILIHCYYGYTASGGPAGVGMAVG 247 Query: 348 TCVVQSISIVIIID 361 + SI +++ D Sbjct: 248 RAIRTSIVTIVVAD 261 >gi|196229086|ref|ZP_03127952.1| ABC-type transport system involved in resistance to organic solvents permease component-like protein [Chthoniobacter flavus Ellin428] gi|196227367|gb|EDY21871.1| ABC-type transport system involved in resistance to organic solvents permease component-like protein [Chthoniobacter flavus Ellin428] Length = 261 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 39/142 (27%), Positives = 76/142 (53%), Gaps = 3/142 (2%) Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + ++I SM+ ++E+DA+ +GL ++ +PR ALI++ P L +L +SA +GA +V+W Sbjct: 114 MTSDITSMRASQEVDALEAVGLHPAEMIFAPRALALIVTAPALAVLGVYSACLGAWLVVW 173 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS--LGKK 345 F F + F S+ T + + K A A+ +++ GF VG + +G Sbjct: 174 LTAGTGFVAFVAAFASSVTSIGMLFAVGKLAITALAMSLISGYFGF-VGARAEQGFVGHI 232 Query: 346 VTTCVVQSISIVIIIDSLFAIF 367 T+ V ++ I+++ L ++ Sbjct: 233 TTSAVAMAVFSTIVVNLLLSLL 254 >gi|126436762|ref|YP_001072453.1| hypothetical protein Mjls_4190 [Mycobacterium sp. JLS] gi|126236562|gb|ABN99962.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 255 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 18/181 (9%) Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L +FGA FS ++ + +IG L++ +++AG +A+ A++GS I EE+DA+R +G+ Sbjct: 72 LLEFGAGDFSGSGAALAAVTQIGPLVSVLVVAGAGATAMCADLGSRTIREELDALRVLGI 131 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 + V+ L+ PR+ A + LL+ G IV F+VF + +A Sbjct: 132 NPVQALVVPRVLAATLVSLLLS---------GVVIVTGLVGGFGFSVFVQNVTPGSFVAG 182 Query: 310 I--FTG-------LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 I TG L+KA ++A +G +VG ++G V VV S + +I Sbjct: 183 ITLLTGAPELGIALVKAGLFGLTASLLACYKGISVGGGPAAVGNAVNETVVYSFVSLFVI 242 Query: 361 D 361 D Sbjct: 243 D 243 >gi|120404937|ref|YP_954766.1| hypothetical protein Mvan_3983 [Mycobacterium vanbaalenii PYR-1] gi|119957755|gb|ABM14760.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 284 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 72/234 (30%), Positives = 115/234 (49%), Gaps = 35/234 (14%) Query: 149 FKGFLLSLIRQM-----YYVGVSG-VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDL 202 ++ LL LI QM V V G V +V ++ TGA++A QG QL+ G E + Sbjct: 48 YRTELLRLIAQMGLGSGALVVVGGTVAIVGFLTMTTGALVAVQGYNQLASVGFEALTGFA 107 Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 + +R I T+V ++ G+A A++G+M+INEEIDA+ +G+ V L + R+ A Sbjct: 108 SAFFNVRLIVPGTTSVALSATIGAAATAQLGAMRINEEIDALEVIGIRSVTYLAATRVLA 167 Query: 263 -LIISLPLLTI---LANFSAIIGASIVIWK---YYDIPFAVFFSRFHSTATLANIFTGLI 315 +I+ +PL + +A +A G +++ + YD F F S T LI Sbjct: 168 GVIVVIPLYCVAVMMAFLAARFGTTVIYGQGSGVYDHYFGTFLSP-----------TDLI 216 Query: 316 KAPFMACAIGIVAM---------KEGFAVGVHSNSLGKKV-TTCVVQSISIVII 359 + F A+ +V M G GV ++G+ V T+ VV S+ IV+I Sbjct: 217 WSFFQCVAMTVVIMLVHTYYGFTASGGPAGV-GEAVGRAVRTSMVVASVEIVMI 269 >gi|91215158|ref|ZP_01252130.1| hypothetical protein P700755_12712 [Psychroflexus torquis ATCC 700755] gi|91186763|gb|EAS73134.1| hypothetical protein P700755_12712 [Psychroflexus torquis ATCC 700755] Length = 247 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 30/212 (14%) Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQ---------FGAEIFSIDLMSILQLREIGVLL 215 +S + +V+ ISF GAVIA Q A S F A SI+ E Sbjct: 42 ISSLGIVVFISFFIGAVIAIQTALNFSNPFVPKSLIGFAAR------QSII--LEFAPTF 93 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A+++AG+ GS I + IG+M+++E+IDA+ MG++ + L+ P+I A+ + P + ++ Sbjct: 94 VAIIMAGKVGSYITSSIGTMRVSEQIDALEVMGINSLNYLVFPKIIAMCM-FPFVIAISM 152 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA------NIFTGLIKAPFMACAIGIVAM 329 F IIGA Y + F S A L +F +K+ A + V Sbjct: 153 FVGIIGA------YTASVYGGFLSSEQFLAGLQEDFIPFQVFYAFLKSFVFAIILATVPA 206 Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 G+ + S +G+ TT V + I+I ++ Sbjct: 207 FHGYYMKGGSLEVGRAATTSFVWTSVIIIFMN 238 >gi|262203811|ref|YP_003275019.1| hypothetical protein Gbro_3952 [Gordonia bronchialis DSM 43247] gi|262087158|gb|ACY23126.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247] Length = 254 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 8/186 (4%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L+SF ++ + GA LS GA + +I +IG ++T +++AG +A Sbjct: 56 IPFTVLVSFTLNILLREIGAQDLSGAGAALGTIT--------QIGPIVTVLIVAGAGATA 107 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ I EEIDA++ +G++ + L+ PRI A LL L I G + Sbjct: 108 ICADLGARTIREEIDAMKVLGINPIHRLVVPRIIASTGVAVLLNSLVCTIGIGGGFVFSV 167 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 D+ F + + ++KA G+V +G V + +G V Sbjct: 168 YLQDVNPGAFIANLTLLTGFGELMISMVKAALFGLFAGMVGCYQGLNVKGGAKGVGDAVN 227 Query: 348 TCVVQS 353 VV S Sbjct: 228 ETVVYS 233 >gi|240170399|ref|ZP_04749058.1| hypothetical protein MkanA1_13895 [Mycobacterium kansasii ATCC 12478] Length = 247 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 9/185 (4%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L+SF ++ + GA LS GA ++ ++G L+T +++AG +A Sbjct: 48 IPFTVLVSFTLNILLRELGAADLSGAGAAFGAVT--------QVGPLVTVLIVAGAGATA 99 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + A++GS I EEIDA+ +G++ V+ L++PR+ A + LL L I+G + Sbjct: 100 MCADLGSRTIREEIDAMEVLGINPVQRLVTPRMLASGLVALLLNSLVVIIGILGGYVFSV 159 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-GVHSNSLGKKV 346 D+ F + + + +KA G+VA G V G + ++G V Sbjct: 160 FVQDVNPGAFAAGITLLTGVPEVIISCVKAALFGLIAGLVACYRGLTVSGGGAKAVGNAV 219 Query: 347 TTCVV 351 VV Sbjct: 220 NETVV 224 >gi|282866016|ref|ZP_06275064.1| protein of unknown function DUF140 [Streptomyces sp. ACTE] gi|282559055|gb|EFB64609.1| protein of unknown function DUF140 [Streptomyces sp. ACTE] Length = 267 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 62/106 (58%), Gaps = 1/106 (0%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 + V+I ++ TG+V+ QG L Q G F+ + + REI L+ + ++ G+ Sbjct: 56 IGVMIAMTLATGSVVGLQGYAALDQIGTSAFTGFISAYFNTREIAPLVAGLALSATVGAG 115 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTI 272 A++G+M+INEE+DA+ MG+ + L++ RI A +++ +PL I Sbjct: 116 FTAQLGAMRINEEVDALEAMGVRSMPYLVTTRIIAGVVAIIPLYAI 161 >gi|291298383|ref|YP_003509661.1| hypothetical protein Snas_0857 [Stackebrandtia nassauensis DSM 44728] gi|290567603|gb|ADD40568.1| protein of unknown function DUF140 [Stackebrandtia nassauensis DSM 44728] Length = 262 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 71/131 (54%), Gaps = 3/131 (2%) Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 ++F TG + QG L+Q G F+ + + REI L+ + ++ G+ A++G Sbjct: 57 LTFFTGTEVGLQGYQALNQVGTSAFTGFISAYFNTREIAPLVAGIALSATVGAGFTAQLG 116 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL--LTILANFSAIIGASIVIWKYY 290 +M++NEE+DA+ MG+ + L++ R+ A L +PL L +L+++ A G +I + Sbjct: 117 AMRVNEEVDALEVMGVRSLPYLVTTRMLAGLAACVPLYVLALLSSYVATRGVAIFYFGQS 176 Query: 291 DIPFAVFFSRF 301 + +FS F Sbjct: 177 SGTYDHYFSTF 187 >gi|289641746|ref|ZP_06473904.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] gi|289508390|gb|EFD29331.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] Length = 290 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 53/97 (54%) Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 + F+ G + ++ L Q GA ++S + LRE+ + + A + G +VAEIG Sbjct: 84 MQFIMGMQCGLEASYTLKQIGAPLYSGIFNAYCSLREMAPYMYGYIFAAKVGCGLVAEIG 143 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 SM+I +EIDA+ MG+ L+ RI A I++P L Sbjct: 144 SMRIADEIDAMEVMGVRSRSYLVGTRIMAAWIAMPFL 180 >gi|183984680|ref|YP_001852971.1| hypothetical protein MMAR_4712 [Mycobacterium marinum M] gi|183178006|gb|ACC43116.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length = 268 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 9/185 (4%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L+SF ++ + GA LS GA ++ ++G L+T +++AG +A Sbjct: 69 IPFTVLVSFTLNILLRELGAADLSGAGAAFGAVT--------QVGPLVTVLIVAGAGATA 120 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + A++GS I EEIDA+ +G++ V+ L++PR+ A + LL L I+G + Sbjct: 121 MCADLGSRTIREEIDAMEVLGINPVQRLVTPRMLASGLVALLLNSLVVIIGIVGGYVFSV 180 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-GVHSNSLGKKV 346 D+ F + + + +KA G+VA G + G + ++G V Sbjct: 181 FVQDVNPGAFAAGITLLTGVPEVIISCVKAALFGLIAGLVACYRGLTISGGGAKAVGNAV 240 Query: 347 TTCVV 351 VV Sbjct: 241 NETVV 245 >gi|326382982|ref|ZP_08204671.1| hypothetical protein SCNU_08596 [Gordonia neofelifaecis NRRL B-59395] gi|326198118|gb|EGD55303.1| hypothetical protein SCNU_08596 [Gordonia neofelifaecis NRRL B-59395] Length = 286 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 67/118 (56%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V++L+S TG V+ QG L Q G++ + L + + RE+ L+ + ++ G Sbjct: 75 VGVMVLMSGFTGVVVGMQGYAALDQIGSQALTGFLSAYVNTREVAPLVAGLALSATVGCG 134 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 A++G+M+I+EEIDA+ M + + L+S R+ A I++ L +L +A + + +V Sbjct: 135 FTAQLGAMRISEEIDALEVMAVPSIPFLVSSRVIAGFIAVIPLYVLGLMAAYLASRVV 192 >gi|134103292|ref|YP_001108953.1| putative ABC transport system permease protein [Saccharopolyspora erythraea NRRL 2338] gi|133915915|emb|CAM06028.1| putative ABC transport system permease protein [Saccharopolyspora erythraea NRRL 2338] Length = 269 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 68/118 (57%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V++ ++ TG V+ QG L+Q G F+ + + REI L+ + ++ GS Sbjct: 58 VGVMVGMTLFTGTVVGLQGYAALNQIGTSAFAGFVSAYFNTREIAPLVAGLALSATVGSG 117 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 A++G+M+I++EIDA+ TMG+ + L++ R+ A +++ L +L ++ + A +V Sbjct: 118 FTAQLGAMRISDEIDALETMGVPSLPYLVTTRVVAGFVAVVPLYVLGLLTSYLAARLV 175 >gi|108761681|ref|YP_632089.1| hypothetical protein MXAN_3909 [Myxococcus xanthus DK 1622] gi|108465561|gb|ABF90746.1| putative membrane protein [Myxococcus xanthus DK 1622] Length = 257 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 46/183 (25%), Positives = 91/183 (49%) Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G ++ Q + +FGA F L E G LL ++++ R G+ AE+ M++ Sbjct: 63 GIIVVLQSGIYVQRFGARAFLGWAAGYGVLWEFGPLLLGLIMSARLGARNAAELALMQVG 122 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 +I+ +R +GLD IL++PR+ A+ +S+ L+ + AI+ S+ +P VFF Sbjct: 123 GQIEGLRGIGLDPFAILVAPRVVAMEVSMLALSGVTFAVAILFESVAALLALGLPVRVFF 182 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 F ++ G++K AI +++ G + ++++G+ VV+S + + Sbjct: 183 GTFSQLLGPLDLLGGVVKTGIFGLAIALLSTTVGLSARGGAHAVGQAAANAVVRSCAAIF 242 Query: 359 IID 361 ++D Sbjct: 243 VLD 245 >gi|291004489|ref|ZP_06562462.1| putative ABC transport system permease protein [Saccharopolyspora erythraea NRRL 2338] Length = 279 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 68/118 (57%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V++ ++ TG V+ QG L+Q G F+ + + REI L+ + ++ GS Sbjct: 68 VGVMVGMTLFTGTVVGLQGYAALNQIGTSAFAGFVSAYFNTREIAPLVAGLALSATVGSG 127 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 A++G+M+I++EIDA+ TMG+ + L++ R+ A +++ L +L ++ + A +V Sbjct: 128 FTAQLGAMRISDEIDALETMGVPSLPYLVTTRVVAGFVAVVPLYVLGLLTSYLAARLV 185 >gi|326333403|ref|ZP_08199649.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1] gi|325948799|gb|EGD40893.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1] Length = 261 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 116/219 (52%), Gaps = 10/219 (4%) Query: 146 SYKFKGFLLSLIRQMYYVG-VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF--SIDL 202 ++F+ F I+Q +++ V+ VP L++ GAVIA Q + QFGA+ F S + Sbjct: 34 PFQFREF----IQQAWFIASVTIVPTA-LVAIPFGAVIALQVGGLVQQFGAQSFVGSAAV 88 Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 ++++Q + + TA+++AG GSAI A++G+ KI EE+DA+ +G+D ++ L+ PR+ A Sbjct: 89 LAVVQ--QAAPIATALLVAGAGGSAIAADLGARKIREELDAMMVLGIDPIQRLVVPRVLA 146 Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322 ++ L L + ++G + + + F + A +A+++ GL KA Sbjct: 147 AMMIAVFLNGLVSIVGVMGGYVFNVIIQGGTPGAYLASFTALAQMADLWQGLAKALVFGL 206 Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 IVA +G G +G V VV + ++ I++ Sbjct: 207 IAAIVAAYKGMNAGGGPKGVGDAVNESVVITFLLLFIVN 245 >gi|320007321|gb|ADW02171.1| protein of unknown function DUF140 [Streptomyces flavogriseus ATCC 33331] Length = 267 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 62/106 (58%), Gaps = 1/106 (0%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 + V+I ++ TG+V+ QG L Q G F+ + + REI L+ + ++ G+ Sbjct: 56 IGVMIAMTLATGSVVGLQGYAALDQIGTSAFTGFISAYFNTREIAPLVAGLALSATVGAG 115 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTI 272 A++G+M+INEE+DA+ MG+ + L++ RI A +++ +PL I Sbjct: 116 FTAQLGAMRINEEVDALEAMGVRSMPYLVTTRIIAGVVAIIPLYAI 161 >gi|118618294|ref|YP_906626.1| integral membrane protein YrbE3A [Mycobacterium ulcerans Agy99] gi|118570404|gb|ABL05155.1| conserved hypothetical integral membrane protein YrbE3A [Mycobacterium ulcerans Agy99] Length = 277 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/179 (23%), Positives = 86/179 (48%), Gaps = 8/179 (4%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P ++ F+ ++ GA S G IF++D + ++T +++AG +A Sbjct: 79 IPWAVISGFLFNVLLTDIGAADFSGTGCAIFTVD--------QSAPIVTVLVVAGAGATA 130 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + A++G+ I EE+DA+R MG++ ++ L+ PR+ P L+ L + +IGA + Sbjct: 131 MCADLGARTIREELDALRVMGINPIQALVVPRVLGATTVSPALSSLVIATGLIGAFLCSV 190 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + + + + ++ +IKA G++A +G +VG +G+ V Sbjct: 191 FLMHVSAGAWVTGLTTLTHTVDVVISMIKATLFGLMAGLIACYKGISVGGGPAGVGRAV 249 >gi|326330430|ref|ZP_08196738.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] gi|325951705|gb|EGD43737.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] Length = 287 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 10/196 (5%) Query: 180 AVIAQQGAFQLSQFGA----EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 A IA + + L+Q GA +FS + G +L+A + G +VAE+GSM Sbjct: 88 AEIALEAHYLLAQLGAGGYTAVFSSTADYTVAPEMWGWILSAKVACG-----LVAELGSM 142 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA-NFSAIIGASIVIWKYYDIPF 294 +I+EEIDA+ MG+D L++ R+ A++I P + + I+G + ++ ++ + Sbjct: 143 RISEEIDALDVMGIDSRAYLVNTRVLAMVIVTPFMFVAGTGLMYILGYYMNVYLFHSVSA 202 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 + S F S ++ LI+A M I +V GF +GK +V ++ Sbjct: 203 GGYLSVFWSFTAQQDLILSLIQATIMGLLIVLVGCYYGFNASGGPVGVGKATAKSMVINL 262 Query: 355 SIVIIIDSLFAIFYFA 370 IV + ++F +F Sbjct: 263 VIVSALGAVFQQLFFG 278 >gi|226349637|ref|YP_002776751.1| putative YrbE family protein [Rhodococcus opacus B4] gi|226245552|dbj|BAH55899.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 266 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 4/180 (2%) Query: 188 FQLSQFGAEIFSIDLMS----ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 +Q++ AEI ++DL + +REIG ++T +++AG +AI A++GS I EEIDA Sbjct: 80 YQINILLAEIGAVDLAGAGAGVAIVREIGPIVTVLVVAGAGSTAICADLGSRTIREEIDA 139 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 ++ +G+D + L PR+ A L L + ++G I + + Sbjct: 140 MKVLGIDPIHRLCVPRVLASTFIAIFLNGLVSAVGLVGGYIATVYMQGASPGQYVTAISI 199 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 L + F IKA G+VA G V +G V VV S ++ + +S+ Sbjct: 200 ITGLGDFFVAEIKAAVFGMLAGLVACHLGLNVRGGPKGVGDAVNQTVVFSFLLLFLANSI 259 >gi|302551012|ref|ZP_07303354.1| ABC transporter integral membrane protein [Streptomyces viridochromogenes DSM 40736] gi|302468630|gb|EFL31723.1| ABC transporter integral membrane protein [Streptomyces viridochromogenes DSM 40736] Length = 271 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 65/123 (52%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V+ +SF TG + QG L+Q G F L + REI L+ + ++ G+ Sbjct: 60 VGVIAFLSFFTGTEVGLQGYAALNQLGTSNFVAFLSAYFNTREIAPLVAGLALSATVGAG 119 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 A++G+M+I+EE DA+ MG+ + L++ R+ A +++ L ++ S+ + A + Sbjct: 120 FTAQLGAMRISEETDALEVMGVPSLPFLVTTRMIAGFVAVIPLYVIGLLSSYLAARTITT 179 Query: 288 KYY 290 YY Sbjct: 180 GYY 182 >gi|302525041|ref|ZP_07277383.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4] gi|302433936|gb|EFL05752.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4] Length = 257 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 14/203 (6%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L++Q +++ + L+S GAVIA +Q GA+ F+ + +++ ++ Sbjct: 36 LVQQFWFIASVSILPTALVSIPFGAVIALHIGSLTTQIGAQSFTGAASVLAIIQQASPIV 95 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA++IAG GSA+ A++GS I EEIDA+ +G+ ++ LI PR+ A ++ + L Sbjct: 96 TALLIAGAGGSAMCADLGSRTIREEIDAMEVLGVSPIQRLIVPRVLA---AMGVAVFLNG 152 Query: 276 FSAIIGASIVIWKYY-------DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328 +++G V+ Y+ P A + + F + A L +++ IKA +VA Sbjct: 153 MVSVVG---VLGGYFFNVIMQGGTPGA-YLASFSALAQLPDLWISEIKALLFGFVAAVVA 208 Query: 329 MKEGFAVGVHSNSLGKKVTTCVV 351 G +G V VV Sbjct: 209 SYRGLNPRGGPKGVGDAVNQSVV 231 >gi|110680422|ref|YP_683429.1| hypothetical protein RD1_3241 [Roseobacter denitrificans OCh 114] gi|109456538|gb|ABG32743.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114] Length = 257 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/101 (36%), Positives = 59/101 (58%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 Q+ +G +PVV L + TG +A Q S+F AE ++++ +RE+G +L + Sbjct: 45 QLLNIGWLSLPVVGLTAVFTGGALALQIYAGGSRFNAEAVVPQIVAVGMVRELGPVLVGL 104 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 MIA R S+I AEI +MK+ E+IDA+ T+ ++ L PR Sbjct: 105 MIAARVTSSIAAEIATMKVTEQIDALVTLSTHPMKYLTVPR 145 >gi|297191127|ref|ZP_06908525.1| ABC transporter integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] gi|197721749|gb|EDY65657.1| ABC transporter integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] Length = 272 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 49/194 (25%), Positives = 85/194 (43%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V+ +SF TG + QG L+Q G F L + REI L+ + ++ G+ Sbjct: 61 VGVIAFLSFFTGTEVGLQGYAALNQLGTSNFVAFLSAYFNTREIAPLVAGLALSATVGAG 120 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 A++G+M+I+EE DA+ MG+ + L++ R+ A +++ L ++ S+ A + Sbjct: 121 FTAQLGAMRISEETDALEVMGVPSLPFLVTTRMIAGFVAVIPLYVVGLLSSYFAARTITT 180 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 YY + F ++ K A I +V G+ +G V Sbjct: 181 GYYGQSAGTYDHYFQQYLPPVDVLWSFGKVIVFAVVIILVHCYYGYYASGGPAGVGVAVG 240 Query: 348 TCVVQSISIVIIID 361 V SI + I+D Sbjct: 241 RAVRTSIVAINILD 254 >gi|167951062|ref|ZP_02538136.1| ABC-type toluene export protein [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 189 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/93 (37%), Positives = 60/93 (64%), Gaps = 8/93 (8%) Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM----SILQL 208 L +IRQ++++G + V+++ TG V+A Q L +FG S+DL+ ++ L Sbjct: 19 LEPVIRQLHFIGARSMLVIVISGLFTGMVLALQFHNTLERFG----SVDLLGSAVALALL 74 Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 RE+G ++ A+M+ GR+GSA+ AEIG M+ +E+I Sbjct: 75 RELGPVMAALMVVGRAGSAMCAEIGIMRTSEQI 107 >gi|239945574|ref|ZP_04697511.1| putative YrbE family protein [Streptomyces roseosporus NRRL 15998] gi|239992041|ref|ZP_04712705.1| putative YrbE family protein [Streptomyces roseosporus NRRL 11379] gi|291449029|ref|ZP_06588419.1| ABC-transporter integral membrane protein [Streptomyces roseosporus NRRL 15998] gi|291351976|gb|EFE78880.1| ABC-transporter integral membrane protein [Streptomyces roseosporus NRRL 15998] Length = 267 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 62/106 (58%), Gaps = 1/106 (0%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 + V+I ++ TG V+ QG L+Q G F+ + + REI L+ + ++ G+ Sbjct: 56 IGVMIAMTLFTGTVVGLQGYAALNQIGTSAFTGFVSAYFNTREIAPLVAGLALSATVGAG 115 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTI 272 A++G+M+INEE+DA+ MG+ + L++ RI A +++ +PL I Sbjct: 116 FTAQLGAMRINEEVDALEAMGIRSMPYLVTTRIIAGVVAIIPLYAI 161 >gi|312138208|ref|YP_004005544.1| integral membrane protein yrbe2a [Rhodococcus equi 103S] gi|311887547|emb|CBH46859.1| putative integral membrane protein YrbE2A [Rhodococcus equi 103S] Length = 275 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 49/196 (25%), Positives = 92/196 (46%), Gaps = 8/196 (4%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L+SF ++ + GA LS GA + ++ ++G ++T +++AG +A Sbjct: 77 IPFTVLVSFTINILLREIGAADLSGAGAALGAVT--------QVGPIVTVLIVAGAGATA 128 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++ + I EEIDA+R +G++ + L+ PR+ A + LL L I+G + Sbjct: 129 ICADLAARTIREEIDAMRVLGINPIHRLVVPRVLASTVVALLLNGLVCTIGILGGFLFSV 188 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 D+ F + + ++KA G++A G V + S+G V Sbjct: 189 YVQDVNPGAFVNGITLLTGFGELMISMLKAGLFGMIAGLMAAYLGMNVRGGAKSVGDAVN 248 Query: 348 TCVVQSISIVIIIDSL 363 VV S + +++ L Sbjct: 249 QTVVFSFMALFVVNVL 264 >gi|239982860|ref|ZP_04705384.1| ABC-transporter integral membrane protein [Streptomyces albus J1074] gi|291454703|ref|ZP_06594093.1| ABC-transporter integral membrane protein [Streptomyces albus J1074] gi|291357652|gb|EFE84554.1| ABC-transporter integral membrane protein [Streptomyces albus J1074] Length = 268 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 61/106 (57%), Gaps = 1/106 (0%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V+I ++ TG V+ QG L Q G F+ + + REI L+ + ++ G+ Sbjct: 57 VGVMIAMTLFTGTVVGLQGYAALDQIGTAAFTGFVSAYFNTREIAPLVAGLALSATVGAG 116 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTI 272 A++G+M+INEE+DA+ MG+ + L++ RI A +++ +PL I Sbjct: 117 FTAQLGAMRINEEVDALEGMGIRSMPYLVTTRIIAGVVAIIPLYAI 162 >gi|262201204|ref|YP_003272412.1| hypothetical protein Gbro_1221 [Gordonia bronchialis DSM 43247] gi|262084551|gb|ACY20519.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247] Length = 349 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/201 (25%), Positives = 98/201 (48%), Gaps = 8/201 (3%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P+ I+++ G +I Q GA L G+ F++ +++ L +++ G SA Sbjct: 148 IPLGIIVTVQIGNIINQLGAQSLLGAGSG-FAV-------IQQAAPLAAGMLLGGAGASA 199 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ + EEIDA+RTMG+D V L+ PR+ A ++ PL+ + ++ A + Sbjct: 200 IAADLGARTVREEIDAMRTMGIDPVARLVVPRVLAAVVVAPLIALFIVLVGVLSAYYLAI 259 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + D+ ++ F S +++ +IF L KA I +V + G + V Sbjct: 260 TFQDVGPGSYWQSFGSFSSVRDIFLALFKAVVFGFIIAVVGCQRGLEARGGPRGVADGVN 319 Query: 348 TCVVQSISIVIIIDSLFAIFY 368 VV S +I ++ + + Y Sbjct: 320 ATVVVSTVGIIGVNLVLTLVY 340 >gi|182434832|ref|YP_001822551.1| putative YrbE family protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326775350|ref|ZP_08234615.1| protein of unknown function DUF140 [Streptomyces cf. griseus XylebKG-1] gi|178463348|dbj|BAG17868.1| putative YrbE family protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326655683|gb|EGE40529.1| protein of unknown function DUF140 [Streptomyces cf. griseus XylebKG-1] Length = 267 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 62/106 (58%), Gaps = 1/106 (0%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 + V++ ++ TG V+ QG L+Q G F+ + + REI L+ + ++ G+ Sbjct: 56 IGVMVAMTLFTGTVVGLQGYAALNQIGTSAFTGFISAYFNTREIAPLVAGLALSATVGAG 115 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTI 272 A++G+M+INEE+DA+ MG+ + L++ RI A +++ +PL I Sbjct: 116 FTAQLGAMRINEEVDALEAMGIRSMPYLVTTRIIAGVVAIIPLYAI 161 >gi|326333296|ref|ZP_08199543.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1] gi|325948940|gb|EGD41033.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1] Length = 284 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/79 (40%), Positives = 51/79 (64%), Gaps = 4/79 (5%) Query: 188 FQLSQFGAEIFSIDLMSILQL----REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 FQ++Q EI ++DL REIG +++ +++AG +AI A++GS KI EEIDA Sbjct: 93 FQVNQLLIEIGAVDLAGAGAAVAVVREIGPIVSVLVVAGAGATAICADLGSRKIREEIDA 152 Query: 244 IRTMGLDFVRILISPRIWA 262 + T+G+D + L+ PR+ A Sbjct: 153 MTTLGIDPIHRLVVPRVAA 171 >gi|297190650|ref|ZP_06908048.1| ABC-transporter integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] gi|197719877|gb|EDY63785.1| ABC-transporter integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] Length = 267 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/139 (28%), Positives = 74/139 (53%), Gaps = 7/139 (5%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 + V+I ++ TG V+ QG L+Q G F+ + + REI L+ + ++ G+ Sbjct: 56 IGVMIAMTLFTGTVVGLQGYAALNQIGTSAFTGFISAYFNTREIAPLVAGLALSATVGAG 115 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 A++G+M+INEE+DA+ MG+ + L++ RI A ++++ L + S+ + + V Sbjct: 116 FTAQLGAMRINEEVDALEAMGVRSMPYLVTTRIIAGVVAIVPLYAIGLLSSYLASRWVTV 175 Query: 288 KY-------YDIPFAVFFS 299 + YD FA+F S Sbjct: 176 LFNGQSAGTYDHYFALFLS 194 >gi|325674886|ref|ZP_08154573.1| membrane protein YrbE4A [Rhodococcus equi ATCC 33707] gi|325554472|gb|EGD24147.1| membrane protein YrbE4A [Rhodococcus equi ATCC 33707] Length = 263 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 49/196 (25%), Positives = 92/196 (46%), Gaps = 8/196 (4%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L+SF ++ + GA LS GA + ++ ++G ++T +++AG +A Sbjct: 65 IPFTVLVSFTINILLREIGAADLSGAGAALGAVT--------QVGPIVTVLIVAGAGATA 116 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++ + I EEIDA+R +G++ + L+ PR+ A + LL L I+G + Sbjct: 117 ICADLAARTIREEIDAMRVLGINPIHRLVVPRVLASTVVALLLNGLVCTIGILGGFLFSV 176 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 D+ F + + ++KA G++A G V + S+G V Sbjct: 177 YVQDVNPGAFVNGITLLTGFGELMISMLKAGLFGMIAGLMAAYLGMNVRGGAKSVGDAVN 236 Query: 348 TCVVQSISIVIIIDSL 363 VV S + +++ L Sbjct: 237 QTVVFSFMALFVVNVL 252 >gi|296165199|ref|ZP_06847746.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899388|gb|EFG78847.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 258 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/161 (29%), Positives = 79/161 (49%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 +RQ ++ + V IL+S ++ Q A Q GA + + +R+ L+ Sbjct: 59 VRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGATSLAGAASGLAVIRQGASLVA 118 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 AV++A GSAI A++GS + EE DA+ MG+ +R L+ PR+ A ++ LT + F Sbjct: 119 AVLMASAVGSAITADLGSRTMREETDAMEVMGVSVIRRLVVPRLAAAVMIGVALTGVVCF 178 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 + + + + + F S F S AT +I L+KA Sbjct: 179 AGFFASYMFNVYFQNGAPGSFVSTFASFATTGDIILALVKA 219 >gi|332169298|gb|AEE18553.1| protein of unknown function DUF140 [Krokinobacter diaphorus 4H-3-7-5] Length = 245 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 9/195 (4%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ----LREIGVLLTAVMIAGRSG 225 +V ISF GAV+A Q A L+ + L+ + E +V++AG+ G Sbjct: 45 IVAFISFFVGAVVAIQTALNLNN---PLLPKSLIGFAARQSIILEFAPTFVSVIMAGKVG 101 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 S I + IG+M++ E+IDA+ MG++ + L+ P+I A++I P L + F IIGA Sbjct: 102 SFITSSIGTMRVTEQIDALEVMGINSLNYLVFPKIVAMLI-YPFLIAIGMFLGIIGAYTA 160 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 P F S +F K A + + G+ + + +GK Sbjct: 161 AVYGGFAPSNDFLSGLQQDFIPFQLFYAFFKTFLFAFLLATIPAYHGYYMRGGALEVGKA 220 Query: 346 VTTCVV-QSISIVII 359 TT V S++I+++ Sbjct: 221 STTSFVWTSVAIILV 235 >gi|291287596|ref|YP_003504412.1| hypothetical protein Dacet_1692 [Denitrovibrio acetiphilus DSM 12809] gi|290884756|gb|ADD68456.1| protein of unknown function DUF140 [Denitrovibrio acetiphilus DSM 12809] Length = 258 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 78/142 (54%) Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 L RQ+Y+ GV +P+ ++S V G + + QFGA+ D++ ++ ++ + Sbjct: 45 LVFFRQIYFTGVQILPMFSVVSIVIGLALVGGLTKFMVQFGAQDRVGDVLVLVTIKHLAP 104 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 ++ A+++ RS +A+ AEI MK+N EID +R++ ++ L PRI + I+ L + Sbjct: 105 MVAAILLVLRSSTAVTAEIALMKMNNEIDTLRSLSINPFIYLYIPRIASGIVCTGALATI 164 Query: 274 ANFSAIIGASIVIWKYYDIPFA 295 + +++G +++ +I F Sbjct: 165 FVYISLLGGYMILSFNLNISFG 186 >gi|326383099|ref|ZP_08204788.1| hypothetical protein SCNU_09181 [Gordonia neofelifaecis NRRL B-59395] gi|326198235|gb|EGD55420.1| hypothetical protein SCNU_09181 [Gordonia neofelifaecis NRRL B-59395] Length = 246 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 53/186 (28%), Positives = 84/186 (45%), Gaps = 8/186 (4%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L+SF ++ + GA LS GA + +I +IG ++T +++AG +A Sbjct: 48 IPFTVLVSFTLNILLREIGAQDLSGAGAALGTIT--------QIGPIVTVLIVAGAGATA 99 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ I EEIDA+ +G++ V L+ PR+ A LL L I G I Sbjct: 100 ICADLGARTIREEIDALEVLGINPVHRLVVPRVIASTGVALLLNSLVCTIGIAGGFIFSV 159 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 D+ F + L + +IKA G+V G V + +G V Sbjct: 160 YLQDVNPGAFIANLTLLTGLGELVISMIKAALFGLFAGLVGCYRGLNVKGGAKGVGDAVN 219 Query: 348 TCVVQS 353 VV S Sbjct: 220 ETVVYS 225 >gi|145223093|ref|YP_001133771.1| hypothetical protein Mflv_2506 [Mycobacterium gilvum PYR-GCK] gi|145215579|gb|ABP44983.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] Length = 269 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 27/204 (13%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L+SF ++ + GA LS GA ++ ++G L+T +++AG +A Sbjct: 70 IPFTVLVSFTLNILLRELGAADLSGAGAAFGAVT--------QVGPLVTVLIVAGAGATA 121 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + A++GS I EEIDA+ +G++ V+ L++PR+ A + LL L I+G Sbjct: 122 MCADLGSRTIREEIDAMEVLGINPVQRLVTPRMLASGLVALLLNSLVVIIGILGG----- 176 Query: 288 KYYDIPFAVFFSRFHSTATLANI--FTGL-------IKAPFMACAIGIVAMKEGFAV-GV 337 Y+ F++F + A A I TG+ +KA G+VA G + G Sbjct: 177 -YF---FSIFVQDVNPGAFAAGITLLTGVPEVIISCVKAALFGLIAGLVACYRGLTITGG 232 Query: 338 HSNSLGKKVTTCVVQSISIVIIID 361 + ++G V VV + + +I+ Sbjct: 233 GAKAVGNAVNETVVYAFMALFVIN 256 >gi|54027083|ref|YP_121325.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54018591|dbj|BAD59961.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 264 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 59/210 (28%), Positives = 106/210 (50%), Gaps = 16/210 (7%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I Q +++ + L++ GAV+A Q + Q GAE ++ + +++ ++T Sbjct: 44 IEQSWFIASVSILPSALVAIPFGAVVALQTGSLIKQLGAESYTGATSVLATVQQAAPVVT 103 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++IAG +GSA+ A++GS I EEIDA+ +G+D + L+ PR+ + + LL L + Sbjct: 104 ALIIAGAAGSAVAADLGSRTIREEIDAMEVLGVDPIARLVVPRVLGMTLVAVLLNGLVSV 163 Query: 277 SAIIGASIVIWKYYDI------PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330 I G ++++ P A + S F + A L +++ G IKA G++A Sbjct: 164 VGIAGG-----YFFNVLLQGGTPGA-YLSSFSALAQLPDLWIGEIKAAIFGLLAGVIAAY 217 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + G+H K V V QS+ I ++ Sbjct: 218 K----GLHPKGGPKGVGDAVNQSVVITFLV 243 >gi|302560791|ref|ZP_07313133.1| ABC-transporter integral membrane protein [Streptomyces griseoflavus Tu4000] gi|302478409|gb|EFL41502.1| ABC-transporter integral membrane protein [Streptomyces griseoflavus Tu4000] Length = 268 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 72/137 (52%), Gaps = 7/137 (5%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V+I ++ TG V+ QG L Q G F+ + + REI L+ + ++ G+ Sbjct: 59 VMIAMTLFTGTVVGLQGYAALDQIGTAAFTGFVSAYFNTREIAPLVAGLALSATVGAGFT 118 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A++G+M+INEE+DA+ MG+ + L++ RI A ++++ L + S+ + + V + Sbjct: 119 AQLGAMRINEEVDALEGMGIRSMPYLVTTRIIAGVVAIVPLYAIGLLSSYLASRYVTVLF 178 Query: 290 -------YDIPFAVFFS 299 YD FA+F S Sbjct: 179 NGQSRGTYDHYFALFLS 195 >gi|315443550|ref|YP_004076429.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|315261853|gb|ADT98594.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 269 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 27/204 (13%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L+SF ++ + GA LS GA ++ ++G L+T +++AG +A Sbjct: 70 IPFTVLVSFTLNILLRELGAADLSGAGAAFGAVT--------QVGPLVTVLIVAGAGATA 121 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + A++GS I EEIDA+ +G++ V+ L++PR+ A + LL L I+G Sbjct: 122 MCADLGSRTIREEIDAMEVLGINPVQRLVTPRMLASGLVALLLNSLVVIIGILGG----- 176 Query: 288 KYYDIPFAVFFSRFHSTATLANI--FTGL-------IKAPFMACAIGIVAMKEGFAV-GV 337 Y+ F++F + A A I TG+ +KA G+VA G + G Sbjct: 177 -YF---FSIFVQDVNPGAFAAGITLLTGVPEVIISCVKAALFGLIAGLVACYRGLTITGG 232 Query: 338 HSNSLGKKVTTCVVQSISIVIIID 361 + ++G V VV + + +I+ Sbjct: 233 GAKAVGNAVNETVVYAFMALFVIN 256 >gi|269128029|ref|YP_003301399.1| hypothetical protein Tcur_3830 [Thermomonospora curvata DSM 43183] gi|268312987|gb|ACY99361.1| protein of unknown function DUF140 [Thermomonospora curvata DSM 43183] Length = 267 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 69/118 (58%), Gaps = 2/118 (1%) Query: 146 SYKFKGFLLSLIRQMYYVG-VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204 ++ + + I Q +++ V+ +PV +LI+ GA I+ Q Q GA+ + L+ Sbjct: 37 TWDVRTWWGEFIEQCWFIARVTSMPV-LLIAIPLGATISLQAGDIARQLGAQSGTGALVV 95 Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 + ++ L +A++I+G GSAI +++G+ I +E+ A+ MG++ V L++PR+WA Sbjct: 96 ANMITQVAPLASALLISGAGGSAITSDMGARNIRDELAAMEVMGINPVHRLVTPRLWA 153 >gi|29832443|ref|NP_827077.1| ABC transporter integral membrane protein [Streptomyces avermitilis MA-4680] gi|29609562|dbj|BAC73612.1| putative ABC transporter permease protein [Streptomyces avermitilis MA-4680] Length = 267 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 64/124 (51%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V+ +SF TG + QG L+Q G F L + REI L+ + ++ G+ Sbjct: 56 VGVIAFLSFFTGTEVGLQGYAALNQLGTSNFVAFLSAYFNTREIAPLVAGLALSATVGAG 115 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 A++G+M+I+EE DA+ MG+ + L++ R+ A +++ L ++ S+ A + Sbjct: 116 FTAQLGAMRISEETDALEVMGVPSLPFLVTTRMIAGFVAVIPLYVVGLLSSYFAARTITT 175 Query: 288 KYYD 291 YY Sbjct: 176 GYYG 179 >gi|15607727|ref|NP_215101.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis H37Rv] gi|15839989|ref|NP_335026.1| hypothetical protein MT0616 [Mycobacterium tuberculosis CDC1551] gi|31791769|ref|NP_854262.1| integral membrane protein YrbE2a [Mycobacterium bovis AF2122/97] gi|121636505|ref|YP_976728.1| integral membrane protein YrbE2a [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660356|ref|YP_001281879.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis H37Ra] gi|148821789|ref|YP_001286543.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis F11] gi|167969010|ref|ZP_02551287.1| hypothetical integral membrane protein yrbE2A [Mycobacterium tuberculosis H37Ra] gi|215402355|ref|ZP_03414536.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis 02_1987] gi|215410128|ref|ZP_03418936.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis 94_M4241A] gi|215425819|ref|ZP_03423738.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis T92] gi|215444700|ref|ZP_03431452.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis T85] gi|218752227|ref|ZP_03531023.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis GM 1503] gi|219556429|ref|ZP_03535505.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis T17] gi|224988977|ref|YP_002643664.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253797521|ref|YP_003030522.1| hypothetical protein TBMG_00594 [Mycobacterium tuberculosis KZN 1435] gi|254230927|ref|ZP_04924254.1| hypothetical integral membrane protein yrbE2A [Mycobacterium tuberculosis C] gi|254363545|ref|ZP_04979591.1| hypothetical integral membrane protein yrbE2A [Mycobacterium tuberculosis str. Haarlem] gi|254549542|ref|ZP_05139989.1| hypothetical protein Mtube_03615 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185464|ref|ZP_05762938.1| hypothetical protein MtubCP_05434 [Mycobacterium tuberculosis CPHL_A] gi|260199592|ref|ZP_05767083.1| hypothetical protein MtubT4_05534 [Mycobacterium tuberculosis T46] gi|260203751|ref|ZP_05771242.1| hypothetical protein MtubK8_05499 [Mycobacterium tuberculosis K85] gi|289441976|ref|ZP_06431720.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis T46] gi|289446140|ref|ZP_06435884.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis CPHL_A] gi|289552840|ref|ZP_06442050.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis KZN 605] gi|289568520|ref|ZP_06448747.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis T17] gi|289573187|ref|ZP_06453414.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis K85] gi|289744301|ref|ZP_06503679.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis 02_1987] gi|289749084|ref|ZP_06508462.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis T92] gi|289756666|ref|ZP_06516044.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|289760706|ref|ZP_06520084.1| hypothetical integral membrane protein yrbE2A [Mycobacterium tuberculosis GM 1503] gi|294996099|ref|ZP_06801790.1| hypothetical protein Mtub2_16765 [Mycobacterium tuberculosis 210] gi|297633081|ref|ZP_06950861.1| hypothetical protein MtubK4_03105 [Mycobacterium tuberculosis KZN 4207] gi|297730059|ref|ZP_06959177.1| hypothetical protein MtubKR_03150 [Mycobacterium tuberculosis KZN R506] gi|298524074|ref|ZP_07011483.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|306774691|ref|ZP_07413028.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu001] gi|306781579|ref|ZP_07419916.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu002] gi|306783229|ref|ZP_07421551.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu003] gi|306787601|ref|ZP_07425923.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu004] gi|306794365|ref|ZP_07432667.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu005] gi|306796335|ref|ZP_07434637.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu006] gi|306802195|ref|ZP_07438863.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu008] gi|306806402|ref|ZP_07443070.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu007] gi|306966602|ref|ZP_07479263.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu009] gi|306970795|ref|ZP_07483456.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu010] gi|307078518|ref|ZP_07487688.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu011] gi|307083082|ref|ZP_07492195.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu012] gi|313657386|ref|ZP_07814266.1| hypothetical protein MtubKV_03140 [Mycobacterium tuberculosis KZN V2475] gi|2222771|emb|CAB09951.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE2A [Mycobacterium tuberculosis H37Rv] gi|13880131|gb|AAK44840.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|31617356|emb|CAD93464.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE2A [Mycobacterium bovis AF2122/97] gi|121492152|emb|CAL70617.1| Conserved hypothetical integral membrane protein yrbE2A [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124599986|gb|EAY58996.1| hypothetical integral membrane protein yrbE2A [Mycobacterium tuberculosis C] gi|134149059|gb|EBA41104.1| hypothetical integral membrane protein yrbE2A [Mycobacterium tuberculosis str. Haarlem] gi|148504508|gb|ABQ72317.1| conserved hypothetical integral membrane protein YrbE2a [Mycobacterium tuberculosis H37Ra] gi|148720316|gb|ABR04941.1| hypothetical integral membrane protein yrbE2A [Mycobacterium tuberculosis F11] gi|224772090|dbj|BAH24896.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253319024|gb|ACT23627.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis KZN 1435] gi|289414895|gb|EFD12135.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis T46] gi|289419098|gb|EFD16299.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis CPHL_A] gi|289437472|gb|EFD19965.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis KZN 605] gi|289537618|gb|EFD42196.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis K85] gi|289542274|gb|EFD45922.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis T17] gi|289684829|gb|EFD52317.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis 02_1987] gi|289689671|gb|EFD57100.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis T92] gi|289708212|gb|EFD72228.1| hypothetical integral membrane protein yrbE2A [Mycobacterium tuberculosis GM 1503] gi|289712230|gb|EFD76242.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|298493868|gb|EFI29162.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308216590|gb|EFO75989.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu001] gi|308325673|gb|EFP14524.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu002] gi|308331897|gb|EFP20748.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu003] gi|308335684|gb|EFP24535.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu004] gi|308337263|gb|EFP26114.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu005] gi|308343188|gb|EFP32039.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu006] gi|308347055|gb|EFP35906.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu007] gi|308350998|gb|EFP39849.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu008] gi|308355632|gb|EFP44483.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu009] gi|308359587|gb|EFP48438.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu010] gi|308363515|gb|EFP52366.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu011] gi|308367196|gb|EFP56047.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu012] gi|323720939|gb|EGB30004.1| hypothetical protein TMMG_03290 [Mycobacterium tuberculosis CDC1551A] gi|326902419|gb|EGE49352.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis W-148] gi|328457304|gb|AEB02727.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis KZN 4207] Length = 265 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/221 (28%), Positives = 109/221 (49%), Gaps = 25/221 (11%) Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209 +G+ ++ + + + VS +P+ +LI F ++A+ GA +S GA + ++ Sbjct: 49 QGWFITSVSLLPTLAVS-IPLTVLIIFTLNILLAEFGAADISGAGAALGAVT-------- 99 Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 ++G L T ++IAG +AI A++G+ I EEIDA+ +G+D + L+ PR+ A I L Sbjct: 100 QLGPLTTVLVIAGAGATAICADLGARTIREEIDAMEVLGIDPIHRLVVPRVVAATIVAAL 159 Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA--NIFTGL---IKAPFMACAI 324 L GA I I F+VF + A + + TGL I + + Sbjct: 160 LN---------GAVITIGLVGGFVFSVFIQHVSAGAYVGTLTLVTGLPEVIISVVKSATF 210 Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 G++A G G+ + K V T V +++ + +I +LFA Sbjct: 211 GLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVI--ALFA 249 >gi|215429420|ref|ZP_03427339.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis EAS054] gi|289752626|ref|ZP_06512004.1| integral membrane protein [Mycobacterium tuberculosis EAS054] gi|289693213|gb|EFD60642.1| integral membrane protein [Mycobacterium tuberculosis EAS054] Length = 265 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/221 (28%), Positives = 109/221 (49%), Gaps = 25/221 (11%) Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209 +G+ ++ + + + VS +P+ +LI F ++A+ GA +S GA + ++ Sbjct: 49 QGWFITSVSLLPTLAVS-IPLTVLIIFTLNILLAEFGAADISGAGAALGAVT-------- 99 Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 ++G L T ++IAG +AI A++G+ I EEIDA+ +G+D + L+ PR+ A I L Sbjct: 100 QLGPLTTVLVIAGAGATAICADLGARTIREEIDAMEVLGIDPIHRLVVPRVVAATIVAAL 159 Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA--NIFTGL---IKAPFMACAI 324 L GA I I F+VF + A + + TGL I + + Sbjct: 160 LN---------GAVITIGLVGGFVFSVFIQHVSAGAYVGTLTLVTGLPEVIISVVKSATF 210 Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 G++A G G+ + K V T V +++ + +I +LFA Sbjct: 211 GLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVI--ALFA 249 >gi|294632698|ref|ZP_06711257.1| ABC-transporter integral membrane protein [Streptomyces sp. e14] gi|292830479|gb|EFF88829.1| ABC-transporter integral membrane protein [Streptomyces sp. e14] Length = 268 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 61/104 (58%), Gaps = 1/104 (0%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V+I ++ TG V+ QG L Q G F+ + + REI L++ + ++ G+ Sbjct: 59 VMIGMTLFTGTVVGLQGYAALDQIGTAAFTGFVSAYFNTREIAPLVSGLALSATVGAGFT 118 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTI 272 A++G+M+INEE+DA+ MG+ + L++ RI A ++++ PL I Sbjct: 119 AQLGAMRINEEVDALEAMGIRSLPYLVTTRIIAGVVAIVPLYAI 162 >gi|324999480|ref|ZP_08120592.1| hypothetical protein PseP1_11966 [Pseudonocardia sp. P1] Length = 246 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 60/105 (57%), Gaps = 8/105 (7%) Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 G+P V L++F ++ + GA LS G+ ++ +IG + T +IAG S + Sbjct: 44 GIPFVALVTFQFNLILVEIGAIDLSGSGSGFATVT--------QIGPVATTFIIAGASST 95 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271 AI A+IG+ KI EE+DA+ +G+D V L+ PR+ A ++ LL Sbjct: 96 AICADIGARKIREELDAMEVLGIDVVHRLVVPRVLATAVNAFLLN 140 >gi|120403833|ref|YP_953662.1| hypothetical protein Mvan_2849 [Mycobacterium vanbaalenii PYR-1] gi|119956651|gb|ABM13656.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 270 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 54/204 (26%), Positives = 103/204 (50%), Gaps = 27/204 (13%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L+SF ++ + GA LS GA ++ ++G ++T +++AG +A Sbjct: 71 IPFTVLVSFTLNILLRELGAADLSGAGAAFGAVT--------QVGPMVTVLIVAGAGATA 122 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + A++GS I EEIDA+ +G++ V+ L++PR+ A S + +L + IIG ++ Sbjct: 123 MCADLGSRTIREEIDALEVLGINPVQRLVTPRMLA---SGLVALLLNSLVVIIG---ILG 176 Query: 288 KYYDIPFAVFFSRFHSTATLANI--FTGL-------IKAPFMACAIGIVAMKEGFAV-GV 337 Y+ F++F + A A I TG+ +KA G+VA G ++ G Sbjct: 177 GYF---FSIFIQGVNPGAFAAGITLLTGVPEVIISCVKAALFGLIAGLVACYRGLSISGG 233 Query: 338 HSNSLGKKVTTCVVQSISIVIIID 361 + ++G V VV + + +++ Sbjct: 234 GAKAVGNAVNETVVYAFMALFVVN 257 >gi|120401387|ref|YP_951216.1| hypothetical protein Mvan_0362 [Mycobacterium vanbaalenii PYR-1] gi|119954205|gb|ABM11210.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 284 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 68/235 (28%), Positives = 114/235 (48%), Gaps = 35/235 (14%) Query: 148 KFKGFLLSLIRQMYY----VGVSG--VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSID 201 ++ G LL LI QM + V G V +V ++ TGA++A QG Q + G E + Sbjct: 47 RYPGELLRLIAQMGLGTGALAVVGGTVAIVGFLTITTGALVAVQGYNQFASVGVEALTGF 106 Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261 + +R I TAV ++ G+ A++G+M+INEEIDA+ +G+ V L + R+ Sbjct: 107 ASAFFNVRLIVPGTTAVALSATIGAGATAQLGAMRINEEIDALEVIGIRSVTYLAATRVL 166 Query: 262 A-LIISLPLLTI---LANFSAIIGASIVIWK---YYDIPFAVFFSRFHSTATLANIFTGL 314 A +++ +PL I +A +A G +++ + YD F F + T L Sbjct: 167 AGVVVVIPLYCIAVMMAFLAARTGTTVIYGQGSGVYDHYFNTFLNP-----------TDL 215 Query: 315 IKAPFMACAIGIVAM---------KEGFAVGVHSNSLGKKV-TTCVVQSISIVII 359 + + + AI +V M G GV ++G+ V T+ VV ++ IV+I Sbjct: 216 VWSFLQSVAITVVVMLVHTYYGYTARGGPAGV-GEAVGRAVRTSMVVAAVEIVMI 269 >gi|120405557|ref|YP_955386.1| hypothetical protein Mvan_4605 [Mycobacterium vanbaalenii PYR-1] gi|119958375|gb|ABM15380.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 284 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 47/170 (27%), Positives = 86/170 (50%), Gaps = 16/170 (9%) Query: 146 SYKFKGFLLSLIRQMYYVGVSG---------VPVVILISFVTGAVIAQQGAFQLSQFGAE 196 Y F + + LIR + +G+ V +V ++ TGA++A QG S+ G E Sbjct: 42 GYVFTHYGVELIRIIAQMGLGAGALIVIGGTVAIVGFLTVTTGALVAVQGYSDFSELGVE 101 Query: 197 IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILI 256 + + + +R I TA+ ++ G+ A++G+M+INEEIDA+ MG+ + L Sbjct: 102 ALTGFVSAYFNVRLIAPATTAIALSATIGAGATAQLGAMRINEEIDALEVMGIRSIAFLA 161 Query: 257 SPRIWA-LIISLPLLTI---LANFSAIIGASIVIWK---YYDIPFAVFFS 299 S R+ A ++ +PL + +A ++A G +++ + YD F F + Sbjct: 162 SSRVIAGFLVVIPLYCVGVLMAFWAARFGTTVIYGQSTGVYDHYFKTFLN 211 >gi|319948072|ref|ZP_08022243.1| hypothetical protein ES5_02019 [Dietzia cinnamea P4] gi|319438260|gb|EFV93209.1| hypothetical protein ES5_02019 [Dietzia cinnamea P4] Length = 254 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 8/196 (4%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L+SF ++ + GA LS GA + ++ ++G ++T +++AG +A Sbjct: 56 IPFTVLVSFTLNILLREIGAADLSGAGAALGAVT--------QVGPMVTVLIVAGAGATA 107 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ I EEIDA+ +G+D V+ L+ PR+ A LL L I+G + Sbjct: 108 ICADLGARTIREEIDAMEVLGIDPVKRLVVPRVAASTFVALLLNGLVCTIGILGGFLFSV 167 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + F + L + IKA G+VA +G V +G V Sbjct: 168 LLQGVNPGAFVNGITLLTGLGELILAQIKAGVFGMLAGLVACYKGLYVRGGPKEVGSAVN 227 Query: 348 TCVVQSISIVIIIDSL 363 VV + + +++++ Sbjct: 228 ETVVFAFMCLFVVNTV 243 >gi|169631232|ref|YP_001704881.1| hypothetical protein MAB_4154c [Mycobacterium abscessus ATCC 19977] gi|169243199|emb|CAM64227.1| Conserved hypothetical protein [Mycobacterium abscessus] Length = 286 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 3/114 (2%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V + ++ +G VIA QG L G E + L + L +R + ++ + +A G+ Sbjct: 75 VGVAVFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVVAGIAMAATIGAG 134 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL--LTILANFSA 278 A++G+M++ EEIDA+ TM + + L+S R+ A LI +PL L++LA F A Sbjct: 135 TTAQLGAMRVAEEIDALETMAVHAISYLVSTRLVAGLIAIIPLYSLSVLAAFFA 188 >gi|239931479|ref|ZP_04688432.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis ATCC 14672] gi|291439855|ref|ZP_06579245.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis ATCC 14672] gi|291342750|gb|EFE69706.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis ATCC 14672] Length = 268 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 72/137 (52%), Gaps = 7/137 (5%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V+I ++ TG V+ QG L Q G F+ + + REI L+ + ++ G+ Sbjct: 59 VMIAMTLFTGTVVGLQGYAALDQIGTAAFTGFVSAYFNTREIAPLVAGLALSATVGAGFT 118 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTILANFSAIIGASIVIW- 287 A++G+M+INEE+DA+ MG+ + L++ RI A ++++ PL I S + S+ + Sbjct: 119 AQLGAMRINEEVDALEGMGIRSMPYLVTTRIIAGVVAIVPLYAIGLLSSYLASRSVTVLF 178 Query: 288 -----KYYDIPFAVFFS 299 YD FA+F S Sbjct: 179 NGQSRGTYDHYFALFLS 195 >gi|226364205|ref|YP_002781987.1| YrbE family protein [Rhodococcus opacus B4] gi|226242694|dbj|BAH53042.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 254 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 8/196 (4%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L+SF ++ + GA LS GA + ++ ++G ++T +++AG +A Sbjct: 56 IPFTVLVSFTINILLREIGAADLSGAGAALGTVT--------QVGPIVTVLIVAGAGATA 107 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++ + I EEIDA+R +G++ + L+ PR+ A + LL L I+G + Sbjct: 108 ICADLSARTIREEIDAMRVLGINPIHRLVVPRVLASTVVALLLNGLVCTIGILGGFVFSV 167 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 D+ F + + +KA G+VA G V + S+G V Sbjct: 168 YIQDVNPGAFVNGITLLTGFGELVISEVKAGLFGMIAGLVAAYLGLNVKGGAKSVGDAVN 227 Query: 348 TCVVQSISIVIIIDSL 363 VV S + +++ L Sbjct: 228 QTVVFSFMALFVVNVL 243 >gi|108801581|ref|YP_641778.1| hypothetical protein Mmcs_4618 [Mycobacterium sp. MCS] gi|119870735|ref|YP_940687.1| hypothetical protein Mkms_4706 [Mycobacterium sp. KMS] gi|108772000|gb|ABG10722.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119696824|gb|ABL93897.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] Length = 280 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 3/114 (2%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V ++ +G VIA QG L G E + L + L +R + ++ + +A G+ Sbjct: 69 VGVAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAGIALAATIGAG 128 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PL--LTILANFSA 278 A++G+M++ EEIDA+ TM + V L+S R+ A +I++ PL L++LA F A Sbjct: 129 TTAQLGAMRVAEEIDAVETMAVHSVSYLVSTRLMAGLIAIVPLYSLSVLAAFFA 182 >gi|296179480|gb|ADG96485.1| SupA [Gordonia cholesterolivorans] Length = 257 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 8/95 (8%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +++ F ++ + GA LS GA I I REIG ++T +++AG +A Sbjct: 63 IPFCVMVVFQINVLLNEIGAIDLSGAGAGIAVI--------REIGPIVTVLVVAGAGATA 114 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 I A++GS I EEIDA+R +G+D ++ L PR+ A Sbjct: 115 ICADLGSRTIREEIDAMRVLGIDPIQRLAVPRVIA 149 >gi|254392559|ref|ZP_05007737.1| ABC-transporter integral membrane protein [Streptomyces clavuligerus ATCC 27064] gi|294816013|ref|ZP_06774656.1| ABC-transporter integral membrane protein [Streptomyces clavuligerus ATCC 27064] gi|326444355|ref|ZP_08219089.1| putative YrbE family protein [Streptomyces clavuligerus ATCC 27064] gi|197706224|gb|EDY52036.1| ABC-transporter integral membrane protein [Streptomyces clavuligerus ATCC 27064] gi|294328612|gb|EFG10255.1| ABC-transporter integral membrane protein [Streptomyces clavuligerus ATCC 27064] Length = 267 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 61/104 (58%), Gaps = 1/104 (0%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V++ ++ TG V+ QG L+Q G F+ + + REI L+ + ++ G+ Sbjct: 58 VMVAMTLFTGTVVGLQGYAALNQIGTSAFTGFVSAYFNTREIAPLVAGLALSATVGAGFT 117 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTI 272 A++G+M+INEE+DA+ MG+ + L++ RI A +++ +PL I Sbjct: 118 AQLGAMRINEEVDALEAMGVRSLPYLVTTRIIAGVVAIIPLYAI 161 >gi|120405354|ref|YP_955183.1| hypothetical protein Mvan_4401 [Mycobacterium vanbaalenii PYR-1] gi|119958172|gb|ABM15177.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 250 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 22/173 (12%) Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L++FGA FS + + +IG ++T +++AG +A+ A++G+ I +EIDA+R MG+ Sbjct: 67 LTEFGAADFSGTGAAYGAVTQIGPIVTVLVVAGAGATAMCADLGARTIRDEIDAMRVMGI 126 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY--DIPFAVFFSR-----FH 302 + ++ L+ PR+ A A+F A++ +S VI F VF F Sbjct: 127 NPLQALVLPRVLA-----------ASFVAVMLSSAVILVSLVGSYVFGVFIQNVTPGAFA 175 Query: 303 STATL----ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 + TL ++ LIKA G++A +G +VG +G V VV Sbjct: 176 AGMTLLTGVGDVVVALIKAAMFGLCAGLIACYKGLSVGGGPAGVGLAVNETVV 228 >gi|254773835|ref|ZP_05215351.1| TrnB1 protein [Mycobacterium avium subsp. avium ATCC 25291] Length = 260 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 9/185 (4%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L+SF ++ + GA LS GA ++ ++G L+T +++AG +A Sbjct: 61 IPFTVLVSFTLNILLRELGAADLSGAGAAFGAVT--------QLGPLVTVLIVAGAGATA 112 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + A++GS I EEIDA+ +G++ ++ L++PR+ A + LL L ++G + Sbjct: 113 MCADLGSRTIREEIDAMEVLGINPIQRLVTPRMLASGLVAFLLNSLVVIIGVLGGYVFSV 172 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-GVHSNSLGKKV 346 D+ F + + + IKA G+VA G ++ G + ++G V Sbjct: 173 FVQDVNPGAFAAGITLLTGVPEVVISCIKAALFGLIAGLVACYRGLSITGGGAKAVGNAV 232 Query: 347 TTCVV 351 VV Sbjct: 233 NETVV 237 >gi|313158068|gb|EFR57473.1| conserved hypothetical protein [Alistipes sp. HGB5] Length = 247 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 1/127 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL-SQFGAEIFSIDLMSILQLREIGVL 214 ++ +M +G+ + + +IS GAVI Q L S F + E Sbjct: 32 IVYEMESLGIDSIGLTAIISVFIGAVITLQMCINLDSPFIPRSLVGYATRETMILEFSST 91 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 + A+++AG+ GS+I +EIG+M+I E+IDA+ MG++ LI P+I A ++ P LTIL+ Sbjct: 92 VVALILAGKVGSSIASEIGTMRITEQIDALEIMGVNSASYLILPKIVAAVVFFPFLTILS 151 Query: 275 NFSAIIG 281 IIG Sbjct: 152 IAIGIIG 158 >gi|118463749|ref|YP_880207.1| TrnB1 protein [Mycobacterium avium 104] gi|118165036|gb|ABK65933.1| TrnB1 protein [Mycobacterium avium 104] Length = 272 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 9/185 (4%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L+SF ++ + GA LS GA ++ ++G L+T +++AG +A Sbjct: 73 IPFTVLVSFTLNILLRELGAADLSGAGAAFGAVT--------QLGPLVTVLIVAGAGATA 124 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + A++GS I EEIDA+ +G++ ++ L++PR+ A + LL L ++G + Sbjct: 125 MCADLGSRTIREEIDAMEVLGINPIQRLVTPRMLASGLVAFLLNSLVVIIGVLGGYVFSV 184 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-GVHSNSLGKKV 346 D+ F + + + IKA G+VA G ++ G + ++G V Sbjct: 185 FVQDVNPGAFAAGITLLTGVPEVVISCIKAALFGLIAGLVACYRGLSITGGGAKAVGNAV 244 Query: 347 TTCVV 351 VV Sbjct: 245 NETVV 249 >gi|111021668|ref|YP_704640.1| hypothetical protein RHA1_ro04696 [Rhodococcus jostii RHA1] gi|110821198|gb|ABG96482.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length = 254 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 8/196 (4%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L+SF ++ + GA LS GA + ++ ++G ++T +++AG +A Sbjct: 56 IPFTVLVSFTINILLREIGAADLSGAGAALGTVT--------QVGPIVTVLIVAGAGATA 107 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++ + I EEIDA+R +G++ + L+ PR+ A + LL L I+G + Sbjct: 108 ICADLSARTIREEIDAMRVLGINPIHRLVVPRVLASTVVALLLNGLVCTIGILGGFVFSV 167 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 D+ F + + +KA G+VA G V + S+G V Sbjct: 168 YIQDVNPGAFVNGITLLTGFGELVISEVKAGLFGMIAGLVAAYLGLNVRGGAKSVGDAVN 227 Query: 348 TCVVQSISIVIIIDSL 363 VV S + +++ L Sbjct: 228 QTVVFSFMALFVVNVL 243 >gi|41406855|ref|NP_959691.1| hypothetical protein MAP0757 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395205|gb|AAS03074.1| hypothetical protein MAP_0757 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 260 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 9/185 (4%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L+SF ++ + GA LS GA ++ ++G L+T +++AG +A Sbjct: 61 IPFTVLVSFTLNILLRELGAADLSGAGAAFGAVT--------QLGPLVTVLIVAGAGATA 112 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + A++GS I EEIDA+ +G++ ++ L++PR+ A + LL L ++G + Sbjct: 113 MCADLGSRTIREEIDAMEVLGINPIQRLVTPRMLASGLVAFLLNSLVVIIGVLGGYVFSV 172 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-GVHSNSLGKKV 346 D+ F + + + IKA G+VA G ++ G + ++G V Sbjct: 173 FVQDVNPGAFAAGITLLTGVPEVVISCIKAALFGLIAGLVACYRGLSITGGGAKAVGNAV 232 Query: 347 TTCVV 351 VV Sbjct: 233 NETVV 237 >gi|119717050|ref|YP_924015.1| hypothetical protein Noca_2826 [Nocardioides sp. JS614] gi|119537711|gb|ABL82328.1| protein of unknown function DUF140 [Nocardioides sp. JS614] Length = 257 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 59/223 (26%), Positives = 108/223 (48%), Gaps = 8/223 (3%) Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 L + Q +++ + IL+S GAVI+ Q Q GA+ F+ + +RE Sbjct: 33 LREFVEQAWFITSVTLMPTILVSIPFGAVISLQVGNLTGQLGAQSFAGATAVLAVVREAA 92 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 + A++IAG +GSAI +++G+ KI EEIDA+ +G+D + LI PR+ A + + + Sbjct: 93 PIAAALIIAGAAGSAICSDMGARKIREEIDAMEVLGVDPLERLIVPRVVATM----FVAL 148 Query: 273 LANFSAIIGASIVIWKYYDI----PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328 + N I + + I F S F + A+L +++ +IKA IV Sbjct: 149 MINGIVIGAGIGGGYFFTVIVQGGSAGAFLSSFTALASLPDLYISMIKAVVFGWLAAIVG 208 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +G G + +G+ V V+ + ++ ++++ YF + Sbjct: 209 SYKGLNAGGGPSGVGRAVNESVIVAFMLLFFLNAVITAIYFQV 251 >gi|126437565|ref|YP_001073256.1| hypothetical protein Mjls_5001 [Mycobacterium sp. JLS] gi|126237365|gb|ABO00766.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 280 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 3/114 (2%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V ++ +G VIA QG L G E + L + L +R + ++ + +A G+ Sbjct: 69 VGVAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAGIALAATIGAG 128 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PL--LTILANFSA 278 A++G+M++ EEIDA+ TM + V L+S R+ A +I++ PL L++LA F A Sbjct: 129 TTAQLGAMRVAEEIDAVETMAVHSVSYLVSTRLMAGLIAIVPLYSLSVLAAFFA 182 >gi|311741974|ref|ZP_07715784.1| ABC superfamily ATP binding cassette transporter membrane protein [Aeromicrobium marinum DSM 15272] gi|311314467|gb|EFQ84374.1| ABC superfamily ATP binding cassette transporter membrane protein [Aeromicrobium marinum DSM 15272] Length = 288 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 76/136 (55%), Gaps = 12/136 (8%) Query: 135 VISNTGEFCASSYKF----KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190 ++ N FC +++ + + +++Q +++ + I++S +I FQ+ Sbjct: 45 LVGNFYNFCGKTFRTMFTRRPVVDEIVQQAWFISSVSIMPAIMVSIPLCMIIV----FQV 100 Query: 191 SQFGAEIFSIDLMSILQ----LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 +Q +I ++DL +REIG +++ +++AG +A+ A++G+ KI +EIDA+ T Sbjct: 101 NQLLIQIGAVDLAGAGAAVAVIREIGPIVSVLVVAGAGATAVCADLGARKIRDEIDAMET 160 Query: 247 MGLDFVRILISPRIWA 262 +G+D + L+ PR+ A Sbjct: 161 LGIDPIHRLVVPRVIA 176 >gi|257054443|ref|YP_003132275.1| ABC-type transport system involved in resistance to organic solvents, permease component [Saccharomonospora viridis DSM 43017] gi|256584315|gb|ACU95448.1| ABC-type transport system involved in resistance to organic solvents, permease component [Saccharomonospora viridis DSM 43017] Length = 279 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 74/138 (53%), Gaps = 7/138 (5%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V++ ++ TG ++ QG L G F+ L S REI L+ + ++ GS Sbjct: 68 VGVMVGLTLFTGVLVGLQGFSALDSIGTSAFTGFLTSFFNTREIAPLVAGLALSATVGSG 127 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA-SIVI 286 A++G+M+I+EE+DA+ MG+ + L++ RI A I++ L I+ S+ + + ++V+ Sbjct: 128 FTAQLGAMRISEEVDALEVMGVPSLPYLVTTRIIAGFIAIIPLYIIGLLSSYLASRTVVV 187 Query: 287 WKY------YDIPFAVFF 298 + Y YD F +F Sbjct: 188 YLYGQSAGTYDHYFDMFL 205 >gi|324997539|ref|ZP_08118651.1| hypothetical protein PseP1_02183 [Pseudonocardia sp. P1] Length = 286 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 57/101 (56%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ ++ V G V + ++ L Q GA ++S + +RE+ + + A + G +V Sbjct: 76 IIWVMQGVMGTVCGLEASYTLKQIGAPLYSGIFNAYCSIREMAPYMWGYIFAAKVGCGLV 135 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 AE+GSM+I++EIDA+ MG+ L+ R+ A +++P L Sbjct: 136 AELGSMRISDEIDAMEVMGIKARSYLVGTRVIAAWLAIPFL 176 >gi|32141168|ref|NP_733570.1| ABC-transporter integral membrane protein [Streptomyces coelicolor A3(2)] gi|256787959|ref|ZP_05526390.1| ABC-transporter integral membrane protein [Streptomyces lividans TK24] gi|289771846|ref|ZP_06531224.1| ABC-transporter integral membrane protein [Streptomyces lividans TK24] gi|24413768|emb|CAD55305.1| putative ABC-transporter integral membrane protein [Streptomyces coelicolor A3(2)] gi|289702045|gb|EFD69474.1| ABC-transporter integral membrane protein [Streptomyces lividans TK24] Length = 268 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 60/104 (57%), Gaps = 1/104 (0%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V+I ++ TG V+ QG L Q G F+ + + REI L+ + ++ G+ Sbjct: 59 VMIAMTLFTGTVVGIQGYAALDQIGTSAFTGFVSAYFNTREIAPLVAGLALSATVGAGFT 118 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTI 272 A++G+M+INEE+DA+ MG+ + L++ RI A +++ +PL I Sbjct: 119 AQLGAMRINEEVDALEGMGIRSMPYLVTTRIIAGVVAIIPLYAI 162 >gi|126433443|ref|YP_001069134.1| hypothetical protein Mjls_0834 [Mycobacterium sp. JLS] gi|126233243|gb|ABN96643.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 281 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 53/202 (26%), Positives = 101/202 (50%), Gaps = 6/202 (2%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 + V++L+ GA +A + L+ G S + I +RE+G +++AV AG++G Sbjct: 70 ISVLLLLGIAVGASLAVEAFAVLNIIGFGGLSGIIGGIGGVRELGPIVSAVAFAGQAGCR 129 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPR-IWALIISLP--LLTILANFSAIIGASI 284 + AEIG+M+I EEIDA+ +GL + ++ R I A+I+ +P L+ ++ANF + Sbjct: 130 MTAEIGAMRIAEEIDALEAIGLRPIPFVVGTRLIGAMILVVPGYLVALIANFFVM---DT 186 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 VI +++ P + F T ++ +IK A+ ++ G+ +G+ Sbjct: 187 VIRVFHNQPGGTYNHYFAQFVTPTDLAYSVIKVAVFCMAVTLIHCYYGYFASGGPVGVGR 246 Query: 345 KVTTCVVQSISIVIIIDSLFAI 366 V S+ +I +D + + Sbjct: 247 ASGRAVRTSLITIIFLDLILTV 268 >gi|328880857|emb|CCA54096.1| toluene tolerance protein [Streptomyces venezuelae ATCC 10712] Length = 268 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 60/104 (57%), Gaps = 1/104 (0%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V++ ++ TG V+ QG L Q G F+ + + REI L+ + ++ G+ Sbjct: 59 VMVAMTLFTGTVVGLQGYAALEQIGTAAFTGFVSAYFNTREIAPLVAGLALSATVGAGFT 118 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTI 272 A++G+M+INEE+DA+ MG+ + L++ RI A ++++ PL I Sbjct: 119 AQLGAMRINEEVDALEGMGIRSMPYLVTTRIIAGVVAIVPLYAI 162 >gi|15609102|ref|NP_216481.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis H37Rv] gi|15841440|ref|NP_336477.1| hypothetical protein MT2017 [Mycobacterium tuberculosis CDC1551] gi|148661774|ref|YP_001283297.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis H37Ra] gi|148823179|ref|YP_001287933.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis F11] gi|253798987|ref|YP_003031988.1| hypothetical protein TBMG_02025 [Mycobacterium tuberculosis KZN 1435] gi|254232135|ref|ZP_04925462.1| hypothetical integral membrane protein yrbE3B [Mycobacterium tuberculosis C] gi|254364784|ref|ZP_04980830.1| hypothetical integral membrane protein yrbE3B [Mycobacterium tuberculosis str. Haarlem] gi|260201058|ref|ZP_05768549.1| hypothetical protein MtubT4_13284 [Mycobacterium tuberculosis T46] gi|289443449|ref|ZP_06433193.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis T46] gi|289570055|ref|ZP_06450282.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis T17] gi|289746096|ref|ZP_06505474.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis 02_1987] gi|289750549|ref|ZP_06509927.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis T92] gi|289754062|ref|ZP_06513440.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis EAS054] gi|289758075|ref|ZP_06517453.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|289762120|ref|ZP_06521498.1| hypothetical integral membrane protein yrbE3B [Mycobacterium tuberculosis GM 1503] gi|294996887|ref|ZP_06802578.1| hypothetical protein Mtub2_20873 [Mycobacterium tuberculosis 210] gi|297634534|ref|ZP_06952314.1| hypothetical protein MtubK4_10446 [Mycobacterium tuberculosis KZN 4207] gi|297731522|ref|ZP_06960640.1| hypothetical protein MtubKR_10551 [Mycobacterium tuberculosis KZN R506] gi|306776197|ref|ZP_07414534.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu001] gi|306779978|ref|ZP_07418315.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu002] gi|306784728|ref|ZP_07423050.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu003] gi|306789085|ref|ZP_07427407.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu004] gi|306793420|ref|ZP_07431722.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu005] gi|306797803|ref|ZP_07436105.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu006] gi|306803684|ref|ZP_07440352.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu008] gi|306808258|ref|ZP_07444926.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu007] gi|306968081|ref|ZP_07480742.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu009] gi|306972306|ref|ZP_07484967.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu010] gi|307080017|ref|ZP_07489187.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu011] gi|307084591|ref|ZP_07493704.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu012] gi|313658855|ref|ZP_07815735.1| hypothetical protein MtubKV_10561 [Mycobacterium tuberculosis KZN V2475] gi|2950435|emb|CAA17838.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE3B [Mycobacterium tuberculosis H37Rv] gi|13881679|gb|AAK46291.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|124601194|gb|EAY60204.1| hypothetical integral membrane protein yrbE3B [Mycobacterium tuberculosis C] gi|134150298|gb|EBA42343.1| hypothetical integral membrane protein yrbE3B [Mycobacterium tuberculosis str. Haarlem] gi|148505926|gb|ABQ73735.1| conserved hypothetical integral membrane protein YrbE3b [Mycobacterium tuberculosis H37Ra] gi|148721706|gb|ABR06331.1| hypothetical integral membrane protein yrbE3B [Mycobacterium tuberculosis F11] gi|253320490|gb|ACT25093.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis KZN 1435] gi|289416368|gb|EFD13608.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis T46] gi|289543809|gb|EFD47457.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis T17] gi|289686624|gb|EFD54112.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis 02_1987] gi|289691136|gb|EFD58565.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis T92] gi|289694649|gb|EFD62078.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis EAS054] gi|289709626|gb|EFD73642.1| hypothetical integral membrane protein yrbE3B [Mycobacterium tuberculosis GM 1503] gi|289713639|gb|EFD77651.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|308215377|gb|EFO74776.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu001] gi|308327132|gb|EFP15983.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu002] gi|308330568|gb|EFP19419.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu003] gi|308334402|gb|EFP23253.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu004] gi|308338198|gb|EFP27049.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu005] gi|308341893|gb|EFP30744.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu006] gi|308345382|gb|EFP34233.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu007] gi|308349685|gb|EFP38536.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu008] gi|308354315|gb|EFP43166.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu009] gi|308358257|gb|EFP47108.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu010] gi|308362185|gb|EFP51036.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu011] gi|308365842|gb|EFP54693.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu012] gi|323719530|gb|EGB28656.1| hypothetical protein TMMG_01226 [Mycobacterium tuberculosis CDC1551A] gi|326903572|gb|EGE50505.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis W-148] gi|328458742|gb|AEB04165.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis KZN 4207] Length = 271 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 59/228 (25%), Positives = 109/228 (47%), Gaps = 13/228 (5%) Query: 149 FKGFLLSLIRQMYY-VGV-----SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDL 202 ++G LL +I QM GV V +V ++ TGA++A QG Q + G E + Sbjct: 35 YRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTGAIVAVQGYNQFASVGVEALTGFA 94 Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 + REI V +A G+ A +G+M+INEEIDA+ +G+ + L S R+ A Sbjct: 95 SAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINEEIDALEVIGIRSISYLASTRVLA 154 Query: 263 -LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMA 321 +++++PL + +A + A + Y V+ F++ ++ ++ +A Sbjct: 155 GVVVAVPLFCV-GLMTAYLAARVGTTAIYGQGSGVYDHYFNTFLRPTDVLWSSVEVVVVA 213 Query: 322 CAIGIVAMKEGFAVGVHSNSLGKKV-----TTCVVQSISIVIIIDSLF 364 I +V G+A +G+ V + VV SI+I+++ +++ Sbjct: 214 LMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASIAILVMTLAIY 261 >gi|284043171|ref|YP_003393511.1| hypothetical protein Cwoe_1709 [Conexibacter woesei DSM 14684] gi|283947392|gb|ADB50136.1| protein of unknown function DUF140 [Conexibacter woesei DSM 14684] Length = 264 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 7/208 (3%) Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211 F +RQ + +S V+ + F+ G +GA+ G ++ + LRE+ Sbjct: 36 FFGEALRQAGLLILSSTLVIWGLVFIIGLQCGIEGAYFTRGTGTPNYAGVFTAWCDLREL 95 Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271 M+A + G+ IVAEIGSM+I EEIDA+ MG+ + L R+ A + LP + Sbjct: 96 VPYAFGYMMAAKVGTGIVAEIGSMRITEEIDALEVMGISSMTFLCGTRLLASWMVLPFVY 155 Query: 272 ILANFSAIIGASI-VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330 I +A I + + V+ + +++ + F + ++ L+K FMA I +V Sbjct: 156 IGGVGAAFIASYLAVVVQIHEVSAGGYELIFWAFQNPTDLLYSLLKGAFMATGIVVVGCY 215 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVI 358 G+ N+ G V + S+V+ Sbjct: 216 YGY------NASGGPVGVGTATAKSMVV 237 >gi|119714949|ref|YP_921914.1| hypothetical protein Noca_0702 [Nocardioides sp. JS614] gi|119535610|gb|ABL80227.1| protein of unknown function DUF140 [Nocardioides sp. JS614] Length = 275 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 44/194 (22%), Positives = 89/194 (45%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V++ ++F TGA + G L Q G F+ + + REI L++ + +A G Sbjct: 64 VGVILAMTFFTGAQVGLSGYAALDQLGTAAFAGFISAYFNTREIAPLVSGIALAATVGCG 123 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 A++GSM+I+EE+DA+ M + + L++ RI +I++ L ++ ++ + + Sbjct: 124 FTAQLGSMRISEEVDALEVMAIPSLPFLVTTRIVGGLIAIIPLYVVGLLASYFATRLTVT 183 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 +++ + F+S ++ K A + ++ G+ +G V Sbjct: 184 QFFGQSAGTYDHYFNSFLPPGDVLWSFGKVLVFAVTVILIHCYHGYTASGGPAGVGVAVG 243 Query: 348 TCVVQSISIVIIID 361 V SI + +ID Sbjct: 244 RAVRTSIVAINVID 257 >gi|326331737|ref|ZP_08198025.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] gi|325950536|gb|EGD42588.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] Length = 280 Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 61/107 (57%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V+ ++F G+ + QG LSQ G FS + + RE+ L++++ +A G Sbjct: 69 VGVIAFMAFFAGSEVGIQGYASLSQIGVAKFSAFISAFFNTREVAPLISSIALAATVGCG 128 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 A +G+M+I+EEIDA+ MG+ + L++ R+ A +++ L I+A Sbjct: 129 YTARLGAMRISEEIDALEAMGVPSLPYLVTTRMIAGFLAVIPLYIVA 175 >gi|300783702|ref|YP_003763993.1| ABC transporter permease [Amycolatopsis mediterranei U32] gi|299793216|gb|ADJ43591.1| ABC transport system permease protein [Amycolatopsis mediterranei U32] Length = 283 Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 88/189 (46%), Gaps = 10/189 (5%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V+I ++ TG V+ QG L+Q G F+ + + REI L++ + ++ G Sbjct: 74 VMIGMTVATGTVVGLQGYSALNQVGTSAFAGFVSAYFNTREIAPLVSGLALSATVGCGFT 133 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTILANFSAIIGASIVIWK 288 A++G+M+I+EEIDA+ MG+ V L++ R+ A ++ +PL I S + I +W Sbjct: 134 AQLGAMRISEEIDALEVMGIPSVPYLVTTRVIAGFLAVIPLYAIGLLSSYLASRQITVWF 193 Query: 289 Y------YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 + YD F +F + + I C G A VGV ++ Sbjct: 194 FGQSAGTYDHYFLLFLPPGDVLWSFGKVLVFSIVVVLAHCYYGFRASGGPAGVGV---AV 250 Query: 343 GKKVTTCVV 351 G+ V T +V Sbjct: 251 GRAVRTAIV 259 >gi|120401160|ref|YP_950989.1| hypothetical protein Mvan_0132 [Mycobacterium vanbaalenii PYR-1] gi|119953978|gb|ABM10983.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 265 Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 36/210 (17%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P+ +L+ F ++A+ GA +S GA I ++ ++G L+T +++AG +A Sbjct: 66 IPLTVLLIFTLNILLAEFGAADVSGAGAAIGAVT--------QLGPLVTVLVVAGAGSTA 117 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII--GASIV 285 I A++G+ I EEIDA+ +G+D + L+ PR+ A + F AI+ GA I Sbjct: 118 ICADLGARTIREEIDALEVLGIDPIHRLVVPRVVA-----------STFVAILLNGAVIT 166 Query: 286 IWKYYDIPFAVFFSRFHSTATLA--NIFTGL-------IKAPFMACAIGIVAMKEGFAVG 336 + F V+ + A ++ + TGL +KA G+V G V Sbjct: 167 VGLVGGFIFGVYLQNVSAGAYVSTLTLITGLPEVVISIVKAATFGLIAGLVGCYRGLTVA 226 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + +G V ++V+ + +LFA+ Sbjct: 227 GGAKGVGTAVNE------TLVLCVIALFAV 250 >gi|260186936|ref|ZP_05764410.1| hypothetical protein MtubCP_13018 [Mycobacterium tuberculosis CPHL_A] Length = 254 Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 13/229 (5%) Query: 148 KFKGFLLSLIRQMYY-VGV-----SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSID 201 ++G LL +I QM GV V +V ++ TGA++A QG Q + G E + Sbjct: 17 HYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTGAIVAVQGYNQFASVGVEALTGF 76 Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261 + REI V +A G+ A +G+M+INEEIDA+ +G+ + L S R+ Sbjct: 77 ASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINEEIDALEVIGIRSISYLASTRVL 136 Query: 262 A-LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320 A +++++PL + +A + A + Y V+ F++ ++ ++ + Sbjct: 137 AGVVVAVPLFCV-GLMTAYLAARVGTTAIYGQGSGVYDHYFNTFLRPTDVLWSSVEVVVV 195 Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKV-----TTCVVQSISIVIIIDSLF 364 A I +V G+A +G+ V + VV SI+I+++ +++ Sbjct: 196 ALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASIAILVMTLAIY 244 >gi|257054989|ref|YP_003132821.1| ABC-type transport system involved in resistance to organic solvents, permease component [Saccharomonospora viridis DSM 43017] gi|256584861|gb|ACU95994.1| ABC-type transport system involved in resistance to organic solvents, permease component [Saccharomonospora viridis DSM 43017] Length = 281 Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 10/189 (5%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V++ ++ TG V+ QG L Q G F+ + + REI L+ + ++ G Sbjct: 72 VMVGMTMFTGIVVGLQGYTALDQVGTAAFAGFISAYFNTREIAPLVAGLALSATVGCGFT 131 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTILANFSAIIGASIVIWK 288 A++GSM+I+EEIDA+ MG+ V L++ R+ A + +PL I S + I +W Sbjct: 132 AQLGSMRISEEIDALEVMGVPSVPYLVTTRVIAGFCAIIPLYAIGLLTSYVASRQITVWF 191 Query: 289 Y------YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 Y YD F +F + + + C G A VGV ++ Sbjct: 192 YGQSEGTYDHYFELFLPPEDVLWSFGKVLLFSVVVVMTHCYYGFRASGGPAGVGV---AV 248 Query: 343 GKKVTTCVV 351 G+ V T +V Sbjct: 249 GRAVRTAIV 257 >gi|118619126|ref|YP_907458.1| integral membrane protein YrbE3B_1 [Mycobacterium ulcerans Agy99] gi|183984021|ref|YP_001852312.1| integral membrane protein YrbE3B_1 [Mycobacterium marinum M] gi|118571236|gb|ABL05987.1| conserved hypothetical integral membrane protein YrbE3B_1 [Mycobacterium ulcerans Agy99] gi|183177347|gb|ACC42457.1| conserved hypothetical integral membrane protein YrbE3B_1 [Mycobacterium marinum M] Length = 284 Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 42/139 (30%), Positives = 75/139 (53%), Gaps = 7/139 (5%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V +V ++ TGA++A QG S+ G E + + +R I TA+ ++ G+ Sbjct: 73 VAIVGFLTVTTGALVAVQGYSDFSELGVEALTGFASAFFNVRLIAPATTAIALSATIGAG 132 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL--LTILANFSAIIGASI 284 A++G+M+IN+EIDA+ MG+ + L + R+ A L++ +PL + +LA+F A + Sbjct: 133 ATAQLGAMRINDEIDALEVMGIRTIAFLAASRVVAGLLVVIPLYCVGVLASFWAARFGTT 192 Query: 285 VIWKY----YDIPFAVFFS 299 V++ YD F F + Sbjct: 193 VLYSQATGVYDHYFRTFLN 211 >gi|145225118|ref|YP_001135796.1| hypothetical protein Mflv_4540 [Mycobacterium gilvum PYR-GCK] gi|145217604|gb|ABP47008.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] Length = 270 Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 56/216 (25%), Positives = 104/216 (48%), Gaps = 31/216 (14%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L+SF ++++ GA LS GA ++ ++G ++T +++AG +A Sbjct: 71 IPFTVLVSFTLNILLSELGAADLSGAGAAFGAVT--------QVGPMVTVLIVAGAGATA 122 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + A++GS I EEIDA+ +G++ V+ L++PR+ A + LL L I+G + Sbjct: 123 MCADLGSRTIREEIDALEVLGINPVQRLVTPRMLASGLVALLLNSLVVIIGIVGGYV--- 179 Query: 288 KYYDIPFAVFFSRFHSTATLANI--FTGL-------IKAPFMACAIGIVAMKEGFAVGV- 337 F++F + A A I TG+ +KA G+VA G ++ Sbjct: 180 ------FSIFVQGVNPGAFAAGITLLTGVPEVIISCVKAALFGLIAGLVACYRGLSISTG 233 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + ++G V VV + + +++ + AIGI Sbjct: 234 GAKAVGNAVNETVVYAFMALFVVN----VVVTAIGI 265 >gi|167970513|ref|ZP_02552790.1| hypothetical integral membrane protein yrbE3B [Mycobacterium tuberculosis H37Ra] gi|215404241|ref|ZP_03416422.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis 02_1987] gi|215411647|ref|ZP_03420443.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis 94_M4241A] gi|215427324|ref|ZP_03425243.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis T92] gi|215430875|ref|ZP_03428794.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis EAS054] gi|215446168|ref|ZP_03432920.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis T85] gi|218753677|ref|ZP_03532473.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis GM 1503] gi|219557919|ref|ZP_03536995.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis T17] gi|254550985|ref|ZP_05141432.1| hypothetical protein Mtube_11071 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289447582|ref|ZP_06437326.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis CPHL_A] gi|298525459|ref|ZP_07012868.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|289420540|gb|EFD17741.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis CPHL_A] gi|298495253|gb|EFI30547.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length = 258 Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 13/229 (5%) Query: 148 KFKGFLLSLIRQMYY-VGV-----SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSID 201 ++G LL +I QM GV V +V ++ TGA++A QG Q + G E + Sbjct: 21 HYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTGAIVAVQGYNQFASVGVEALTGF 80 Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261 + REI V +A G+ A +G+M+INEEIDA+ +G+ + L S R+ Sbjct: 81 ASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINEEIDALEVIGIRSISYLASTRVL 140 Query: 262 A-LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320 A +++++PL + +A + A + Y V+ F++ ++ ++ + Sbjct: 141 AGVVVAVPLFCV-GLMTAYLAARVGTTAIYGQGSGVYDHYFNTFLRPTDVLWSSVEVVVV 199 Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKV-----TTCVVQSISIVIIIDSLF 364 A I +V G+A +G+ V + VV SI+I+++ +++ Sbjct: 200 ALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASIAILVMTLAIY 248 >gi|289554258|ref|ZP_06443468.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis KZN 605] gi|289438890|gb|EFD21383.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis KZN 605] Length = 247 Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 13/229 (5%) Query: 148 KFKGFLLSLIRQMYY-VGV-----SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSID 201 ++G LL +I QM GV V +V ++ TGA++A QG Q + G E + Sbjct: 10 HYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTGAIVAVQGYNQFASVGVEALTGF 69 Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261 + REI V +A G+ A +G+M+INEEIDA+ +G+ + L S R+ Sbjct: 70 ASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINEEIDALEVIGIRSISYLASTRVL 129 Query: 262 A-LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320 A +++++PL + +A + A + Y V+ F++ ++ ++ + Sbjct: 130 AGVVVAVPLFCV-GLMTAYLAARVGTTAIYGQGSGVYDHYFNTFLRPTDVLWSSVEVVVV 188 Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKV-----TTCVVQSISIVIIIDSLF 364 A I +V G+A +G+ V + VV SI+I+++ +++ Sbjct: 189 ALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASIAILVMTLAIY 237 >gi|41410180|ref|NP_963016.1| hypothetical protein MAP4082 [Mycobacterium avium subsp. paratuberculosis K-10] gi|254776985|ref|ZP_05218501.1| hypothetical protein MaviaA2_20271 [Mycobacterium avium subsp. avium ATCC 25291] gi|41399014|gb|AAS06632.1| hypothetical protein MAP_4082 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 265 Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 24/204 (11%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P+ +LI F ++A+ GA +S GA + ++ ++G L T ++IAG +A Sbjct: 66 IPLTVLIIFTLNILLAEFGAADISGAGAALGAVT--------QLGPLTTVLVIAGAGSTA 117 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ I EEIDA+ +G+D + L+ PR+ A I LL GA I I Sbjct: 118 ICADLGARTIREEIDALEVLGIDPIHRLVVPRVVAATIVATLLN---------GAVITIG 168 Query: 288 KYYDIPFAVFFSRFHSTATLA--NIFTGL---IKAPFMACAIGIVAMKEGFAVGVHSNSL 342 F VF + A + + TGL + + + G +A G G+ + Sbjct: 169 LVGGFVFGVFIQHISAGAYVGTLTLITGLPEVVISVVKSATFGTIAGLVGCYRGLTTKGG 228 Query: 343 GKKVTTCVVQSISIVIIIDSLFAI 366 K V T V +++ + +I +LFA+ Sbjct: 229 PKGVGTAVNETLVLCVI--ALFAV 250 >gi|255534289|ref|YP_003094660.1| ABC-type transport system involved in resistance to organic solvents, permease component [Flavobacteriaceae bacterium 3519-10] gi|255340485|gb|ACU06598.1| ABC-type transport system involved in resistance to organic solvents, permease component [Flavobacteriaceae bacterium 3519-10] Length = 250 Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 67/120 (55%), Gaps = 9/120 (7%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSID------LMSILQLRE 210 +R+++ +GV+ +V+ S GAV+A Q + F A F I ++ + E Sbjct: 34 MREIHDLGVNSFGLVLFTSTFVGAVVAIQ---MFNNFSASSFPIPNSFIGYATKVVLILE 90 Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 + +V++AG+ GS I + IG+M++ E+IDA+ MG++ LI P+I A II PLL Sbjct: 91 FAPTIISVILAGKVGSYIASSIGTMRVTEQIDALDIMGVNSPNFLILPKILASIIFNPLL 150 >gi|312141009|ref|YP_004008345.1| integral membrane protein yrbe4b [Rhodococcus equi 103S] gi|325675354|ref|ZP_08155038.1| ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] gi|311890348|emb|CBH49666.1| putative integral membrane protein YrbE4B [Rhodococcus equi 103S] gi|325553325|gb|EGD23003.1| ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] Length = 286 Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 67/116 (57%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V++++S TG V+ QG L Q G+ + + L + + REI ++ A+ ++ G Sbjct: 77 VIVMMSGFTGVVVGLQGFAALDQLGSSVLTGFLSAYVNTREIAPIVAALALSATVGCGFT 136 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 A++G+M+I+EEIDA+ M + V L++ R+ A +++ L I+ +A + + +V Sbjct: 137 AQLGAMRISEEIDALEVMAVPSVPFLVTTRMIAGFVAVIPLYIVGLLAAYLASRVV 192 >gi|118466592|ref|YP_883684.1| hypothetical protein MAV_4553 [Mycobacterium avium 104] gi|118167879|gb|ABK68776.1| conserved hypothetical protein [Mycobacterium avium 104] Length = 260 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 24/204 (11%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P+ +LI F ++A+ GA +S GA + ++ ++G L T ++IAG +A Sbjct: 61 IPLTVLIIFTLNILLAEFGAADISGAGAALGAVT--------QLGPLTTVLVIAGAGSTA 112 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ I EEIDA+ +G+D + L+ PR+ A I LL GA I I Sbjct: 113 ICADLGARTIREEIDALEVLGIDPIHRLVVPRVVAATIVATLLN---------GAVITIG 163 Query: 288 KYYDIPFAVFFSRFHSTATLA--NIFTGL---IKAPFMACAIGIVAMKEGFAVGVHSNSL 342 F VF + A + + TGL + + + G +A G G+ + Sbjct: 164 LVGGFVFGVFIQHISAGAYVGTLTLITGLPEVVISVVKSATFGTIAGLVGCYRGLTTKGG 223 Query: 343 GKKVTTCVVQSISIVIIIDSLFAI 366 K V T V +++ + +I +LFA+ Sbjct: 224 PKGVGTAVNETLVLCVI--ALFAV 245 >gi|315445485|ref|YP_004078364.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|315263788|gb|ADU00530.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 270 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 56/216 (25%), Positives = 104/216 (48%), Gaps = 31/216 (14%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L+SF ++++ GA LS GA ++ ++G ++T +++AG +A Sbjct: 71 IPFTVLVSFTLNILLSELGAADLSGAGAAFGAVT--------QVGPMVTVLIVAGAGATA 122 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + A++GS I EEIDA+ +G++ V+ L++PR+ A + LL L I+G + Sbjct: 123 MCADLGSRTIREEIDALEVLGINPVQRLVTPRMLASGLVALLLNSLVVIIGIVGGYV--- 179 Query: 288 KYYDIPFAVFFSRFHSTATLANI--FTGL-------IKAPFMACAIGIVAMKEGFAVGV- 337 F++F + A A I TG+ +KA G+VA G ++ Sbjct: 180 ------FSIFVQGVNPGAFAAGITLLTGVPEVIISCVKAALFGLIAGLVACYRGLSISTG 233 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + ++G V VV + + +++ + AIGI Sbjct: 234 GAKAVGNAVNETVVYAFMALFVVN----VVVTAIGI 265 >gi|291614199|ref|YP_003524356.1| hypothetical protein Slit_1738 [Sideroxydans lithotrophicus ES-1] gi|291584311|gb|ADE11969.1| protein of unknown function DUF140 [Sideroxydans lithotrophicus ES-1] Length = 260 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 2/208 (0%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 RQ+++ GV + +V + ++GA++ Q + G ++ ++ +RE+G L A Sbjct: 49 RQIFFTGVEALRIVAVFGLLSGALVITQITSLVG--GDSELTVKILIWTLVREVGPLFAA 106 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++I RS +AI +E+ MK E+ ++ MG+ L+ PRI + +++ LTI Sbjct: 107 IIIIARSSAAIASELALMKTRHEMTSLYRMGIPPQDYLLVPRIAGVTLAVLGLTIYFQVV 166 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 AI G + + ++ + RF T L+ K AI ++ G Sbjct: 167 AIGGGLAISAMFQNVSYLDQVGRFLQTVKLSEFAVVAFKGCLFGLAISTISCYNGMQAQP 226 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + K V+QS+ V +D++ A Sbjct: 227 SVTEVPKVAIKAVLQSLLFVFTLDAVIA 254 >gi|296165083|ref|ZP_06847636.1| integral membrane protein YRBE1A [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899576|gb|EFG79029.1| integral membrane protein YRBE1A [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 264 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 9/203 (4%) Query: 149 FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL 208 + G+ L + + + VS +P +L+ F ++A+ GA +S GA I ++ Sbjct: 47 WNGWFLMRVSLLPTIAVS-IPETVLLIFTLNLLLAEIGAADVSGAGAAIGAVT------- 98 Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268 ++G ++T +++AG G+AI A++G+ I EEIDA+ +G+D + L+ PR+ A + Sbjct: 99 -QLGPIVTVLVVAGAGGTAICADLGARTIREEIDALEVLGIDPIHRLVVPRVVASTMVAV 157 Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328 LL L + G + ++ + S + L + IKA G+V Sbjct: 158 LLNGLVVAVGLGGGYLFSVYLQNVSSGAYLSTLTALTGLPEVVIAFIKAATFGLIAGLVG 217 Query: 329 MKEGFAVGVHSNSLGKKVTTCVV 351 G V S LG V VV Sbjct: 218 CYRGLIVRGGSKGLGTAVNETVV 240 >gi|117164592|emb|CAJ88138.1| putative ABC-transporter integral membrane protein [Streptomyces ambofaciens ATCC 23877] Length = 268 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 59/103 (57%), Gaps = 1/103 (0%) Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 +I ++ TG V+ QG L Q G F+ + + REI L+ + ++ G+ A Sbjct: 60 MIAMTLFTGTVVGLQGYAALDQIGTAAFTGFVSAYFNTREIAPLVAGLALSATVGAGFTA 119 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTI 272 ++G+M+INEE+DA+ MG+ + L++ RI A +++ +PL I Sbjct: 120 QLGAMRINEEVDALEGMGIRSLPYLVTTRIIAGVVAIIPLYAI 162 >gi|167753066|ref|ZP_02425193.1| hypothetical protein ALIPUT_01336 [Alistipes putredinis DSM 17216] gi|167659380|gb|EDS03510.1| hypothetical protein ALIPUT_01336 [Alistipes putredinis DSM 17216] Length = 247 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 43/135 (31%), Positives = 74/135 (54%), Gaps = 9/135 (6%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL- 214 +I +M +G++ + + +IS GAVI Q + L + I + RE +L Sbjct: 32 IIYEMESLGLNSIGLTAIISVFIGAVITLQMSINLESPFIPKYIIGYAT----RETMILE 87 Query: 215 ----LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 + A+++AG+ GS+I +EIG+M+I E+IDA+ MG++ LI P+I A ++ P L Sbjct: 88 FSSTVVALILAGKVGSSIASEIGTMRITEQIDALEIMGVNSASYLILPKIVATVLFFPFL 147 Query: 271 TILANFSAIIGASIV 285 IL+ I G ++ Sbjct: 148 AILSILIGIAGGYLI 162 >gi|305664611|ref|YP_003860898.1| hypothetical protein FB2170_17306 [Maribacter sp. HTCC2170] gi|88708628|gb|EAR00864.1| hypothetical protein FB2170_17306 [Maribacter sp. HTCC2170] Length = 265 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 52/206 (25%), Positives = 98/206 (47%), Gaps = 28/206 (13%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ----LREIGVLLTAVMIAGRSG 225 ++I ISF G V+A Q A ++ +E+ +L+ + E ++++AG+ G Sbjct: 65 ILIFISFFIGGVVAIQTALNIT---SELIPKNLVGFATRQSIILEFAPTFCSIIMAGKVG 121 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 S I + IG+M++ E+IDA+ MG++ + L+ P+I AL++ P + ++ + I G Sbjct: 122 SYITSSIGTMRVTEQIDALEVMGVNALNYLVFPKIIALLL-YPFIIAISMYVGIFGG--- 177 Query: 286 IWKYYDIPFAVFFSRFHSTATLA----------NIFTGLIKAPFMACAIGIVAMKEGFAV 335 W FA F F ++A ++ IK A + + GF + Sbjct: 178 -W------FAGVFGGFSTSADFVEGVQLDFIPFHVTYSFIKTLVFAFILATIPSYHGFYM 230 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361 + +GK TT V + ++II++ Sbjct: 231 KGGALEVGKAATTSFVWTSVVIIILN 256 >gi|326333402|ref|ZP_08199648.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] gi|325948798|gb|EGD40892.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] Length = 275 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 44/199 (22%), Positives = 90/199 (45%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V++ ++F TGA + G L Q G FS + + REI L+ + +A G Sbjct: 64 VGVILAMTFFTGAQVGLSGYTALDQLGTSAFSGFVSAYFNTREIAPLVAGIALAATVGCG 123 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 A++G+M+I+EE+DA+ M + + L++ R+ +I++ L ++ S+ + + Sbjct: 124 FTAQLGAMRISEEVDALEVMAIPSLPFLVTTRMIGGLIAIVPLYVVGLLSSYVATRFTVI 183 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 +Y + F++ ++ K A + ++ G+ +G V Sbjct: 184 LFYGQSAGTYDHYFNTFLPPVDVLWSFGKVLIFAVVVILIHCYHGYNASGGPAGVGVAVG 243 Query: 348 TCVVQSISIVIIIDSLFAI 366 V SI V ++D + ++ Sbjct: 244 KAVRTSIVAVSVLDLMLSM 262 >gi|326382401|ref|ZP_08204093.1| hypothetical protein SCNU_05666 [Gordonia neofelifaecis NRRL B-59395] gi|326199131|gb|EGD56313.1| hypothetical protein SCNU_05666 [Gordonia neofelifaecis NRRL B-59395] Length = 245 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 50/206 (24%), Positives = 105/206 (50%), Gaps = 1/206 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +++ + + V+ +P IL++ G +++ Q Q GA + + +++ ++ Sbjct: 25 VVQTWFVITVTTLPA-ILVAIPFGVIVSVQVGSLTQQVGATSIAGAAGGLGIIQQGAPIV 83 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA+++ G +GSAI +++G+ + EEIDA+ T+GL+ R +++PR A++I P+L +L Sbjct: 84 TALLLGGAAGSAIASDLGARTVREEIDAMETLGLNPTRRVVAPRFVAVLIVAPMLCMLIV 143 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 F+ ++ I+ I + + F S A+ A+I LIK+ + +A G + Sbjct: 144 FTGLVAGYILSVNVQGITPGSYVASFASFASSADIVVALIKSVVFGLVVVAIACHRGLST 203 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIID 361 + + V VV + +I+ Sbjct: 204 KGGPKGVAESVNATVVLGVVACFVIN 229 >gi|256820380|ref|YP_003141659.1| hypothetical protein Coch_1553 [Capnocytophaga ochracea DSM 7271] gi|315223460|ref|ZP_07865317.1| ABC superfamily ATP binding cassette transporter permease protein [Capnocytophaga ochracea F0287] gi|256581963|gb|ACU93098.1| protein of unknown function DUF140 [Capnocytophaga ochracea DSM 7271] gi|314946633|gb|EFS98624.1| ABC superfamily ATP binding cassette transporter permease protein [Capnocytophaga ochracea F0287] Length = 245 Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 63/114 (55%), Gaps = 2/114 (1%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTAVMIAGRSGSAI 228 +V ISF G V+A Q A + + I + + E TA+++AG+ GS I Sbjct: 45 IVTFISFFVGGVVAVQTALNIDNPFIPKYLIGFATRQSIVLEFAPTFTAIILAGKIGSFI 104 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 + IG+M++ E+IDA+ MG++ V L+ P+I AL++ +P L L + ++G Sbjct: 105 TSSIGTMRVTEQIDALDIMGVNSVNYLVFPKIVALML-MPFLIALGMYLGVLGG 157 >gi|126436263|ref|YP_001071954.1| hypothetical protein Mjls_3686 [Mycobacterium sp. JLS] gi|126236063|gb|ABN99463.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 270 Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 27/206 (13%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L+SF ++ + GA LS GA ++ ++G L+T +++AG +A Sbjct: 71 IPFTVLVSFTLNILLRELGAADLSGAGAAFGAVT--------QVGPLVTVLIVAGAGATA 122 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + A++GS I EEI A+ +G+D V+ L++PR+ A + LL L I+G Sbjct: 123 MCADLGSRTIREEISAMEVLGIDPVQRLVTPRMLASGLVALLLNSLVVIIGILGGYT--- 179 Query: 288 KYYDIPFAVFFSRFHSTATLANI--FTGL-------IKAPFMACAIGIVAMKEGFAV-GV 337 F+VF + A A I TG+ +KA G+VA G V G Sbjct: 180 ------FSVFIQDVNPGAFAAGITLLTGVPEMIISCVKALLFGLIAGLVACYRGLTVSGG 233 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++G V VV + + I+ L Sbjct: 234 GAKAVGNAVNETVVYAFMALFAINVL 259 >gi|256380616|ref|YP_003104276.1| hypothetical protein Amir_6633 [Actinosynnema mirum DSM 43827] gi|255924919|gb|ACU40430.1| protein of unknown function DUF140 [Actinosynnema mirum DSM 43827] Length = 279 Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 64/112 (57%), Gaps = 3/112 (2%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V++ +S TG V+ QG L Q G F+ + + REI L+ + ++ GS Sbjct: 70 VMVGLSVFTGTVVGLQGFTALDQIGTSAFAGFVSAYFNTREIAPLVAGLALSATVGSGFT 129 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRI---WALIISLPLLTILANFSA 278 A++G+M+I+EEIDA+ MG+ + L++ RI +A I+ L ++ +L ++ A Sbjct: 130 AQLGAMRISEEIDALEVMGVPSLPYLVTTRIVAGFAAIVPLYVIGLLTSYLA 181 >gi|15609101|ref|NP_216480.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis H37Rv] gi|15841439|ref|NP_336476.1| hypothetical protein MT2016 [Mycobacterium tuberculosis CDC1551] gi|148661773|ref|YP_001283296.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis H37Ra] gi|167970514|ref|ZP_02552791.1| conserved hypothetical integral membrane protein YrbE3A [Mycobacterium tuberculosis H37Ra] gi|215411646|ref|ZP_03420442.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis 94_M4241A] gi|215427323|ref|ZP_03425242.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis T92] gi|215430874|ref|ZP_03428793.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis EAS054] gi|215446167|ref|ZP_03432919.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis T85] gi|219557918|ref|ZP_03536994.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis T17] gi|254232134|ref|ZP_04925461.1| hypothetical integral membrane protein yrbE3A [Mycobacterium tuberculosis C] gi|254364783|ref|ZP_04980829.1| hypothetical integral membrane protein yrbE3A [Mycobacterium tuberculosis str. Haarlem] gi|260186935|ref|ZP_05764409.1| hypothetical protein MtubCP_13013 [Mycobacterium tuberculosis CPHL_A] gi|260201057|ref|ZP_05768548.1| hypothetical protein MtubT4_13279 [Mycobacterium tuberculosis T46] gi|289443448|ref|ZP_06433192.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis T46] gi|289447581|ref|ZP_06437325.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis CPHL_A] gi|289554259|ref|ZP_06443469.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis KZN 605] gi|289570054|ref|ZP_06450281.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis T17] gi|289746097|ref|ZP_06505475.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis 02_1987] gi|289750548|ref|ZP_06509926.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis T92] gi|289754061|ref|ZP_06513439.1| integral membrane protein [Mycobacterium tuberculosis EAS054] gi|289758074|ref|ZP_06517452.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|289762119|ref|ZP_06521497.1| hypothetical integral membrane protein yrbE3A [Mycobacterium tuberculosis GM 1503] gi|294996886|ref|ZP_06802577.1| hypothetical protein Mtub2_20868 [Mycobacterium tuberculosis 210] gi|297731521|ref|ZP_06960639.1| hypothetical protein MtubKR_10546 [Mycobacterium tuberculosis KZN R506] gi|298525458|ref|ZP_07012867.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|306776196|ref|ZP_07414533.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu001] gi|306784727|ref|ZP_07423049.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu003] gi|306803683|ref|ZP_07440351.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu008] gi|306968080|ref|ZP_07480741.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu009] gi|306972305|ref|ZP_07484966.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu010] gi|307080016|ref|ZP_07489186.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu011] gi|307084590|ref|ZP_07493703.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu012] gi|308369573|ref|ZP_07418314.2| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu002] gi|308372102|ref|ZP_07427406.2| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu004] gi|308373284|ref|ZP_07431721.2| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu005] gi|308374452|ref|ZP_07436104.2| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu006] gi|308375733|ref|ZP_07444925.2| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu007] gi|313658854|ref|ZP_07815734.1| hypothetical protein MtubKV_10556 [Mycobacterium tuberculosis KZN V2475] gi|2950434|emb|CAA17837.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE3A [Mycobacterium tuberculosis H37Rv] gi|13881678|gb|AAK46290.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|124601193|gb|EAY60203.1| hypothetical integral membrane protein yrbE3A [Mycobacterium tuberculosis C] gi|134150297|gb|EBA42342.1| hypothetical integral membrane protein yrbE3A [Mycobacterium tuberculosis str. Haarlem] gi|148505925|gb|ABQ73734.1| conserved hypothetical integral membrane protein YrbE3A [Mycobacterium tuberculosis H37Ra] gi|289416367|gb|EFD13607.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis T46] gi|289420539|gb|EFD17740.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis CPHL_A] gi|289438891|gb|EFD21384.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis KZN 605] gi|289543808|gb|EFD47456.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis T17] gi|289686625|gb|EFD54113.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis 02_1987] gi|289691135|gb|EFD58564.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis T92] gi|289694648|gb|EFD62077.1| integral membrane protein [Mycobacterium tuberculosis EAS054] gi|289709625|gb|EFD73641.1| hypothetical integral membrane protein yrbE3A [Mycobacterium tuberculosis GM 1503] gi|289713638|gb|EFD77650.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|298495252|gb|EFI30546.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308215376|gb|EFO74775.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu001] gi|308327131|gb|EFP15982.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu002] gi|308330567|gb|EFP19418.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu003] gi|308334401|gb|EFP23252.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu004] gi|308338197|gb|EFP27048.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu005] gi|308341892|gb|EFP30743.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu006] gi|308345381|gb|EFP34232.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu007] gi|308349684|gb|EFP38535.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu008] gi|308354314|gb|EFP43165.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu009] gi|308358256|gb|EFP47107.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu010] gi|308362184|gb|EFP51035.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu011] gi|308365841|gb|EFP54692.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu012] gi|323719529|gb|EGB28655.1| hypothetical protein TMMG_01225 [Mycobacterium tuberculosis CDC1551A] gi|326903571|gb|EGE50504.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis W-148] gi|328458743|gb|AEB04166.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis KZN 4207] Length = 265 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 89/173 (51%), Gaps = 2/173 (1%) Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L+ GA FS +I + + ++T +++AG +A+ A++G+ I EE+DA+R MG+ Sbjct: 81 LTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVMGI 140 Query: 250 DFVRILISPRIW-ALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + ++ L +PR+ A +SL L +++ + +IGA + + + + Sbjct: 141 NPIQALAAPRVLAATTVSLALNSVVTA-TGLIGAFFCSVFLMHVSAGAWVTGLTTLTHTV 199 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 ++ +IKA G++A +G +VG +G+ V VV + ++ +I+ Sbjct: 200 DVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVIN 252 >gi|319950492|ref|ZP_08024405.1| putative YrbE family protein [Dietzia cinnamea P4] gi|319435851|gb|EFV91058.1| putative YrbE family protein [Dietzia cinnamea P4] Length = 285 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 50/189 (26%), Positives = 94/189 (49%), Gaps = 10/189 (5%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V++++S TG V+ QG L Q G+ + + L + + RE+ ++ ++ ++ G Sbjct: 76 VIVMMSGFTGVVVGLQGYAALDQIGSSVLTGFLSAYVNTREVAPVVASLALSATVGCGFT 135 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWA---LIISLPLLTILANFSAIIGASIVI 286 A++G+M+I+EEIDA+ M + V L++ R+ A +I L ++ +L+++ A G + +I Sbjct: 136 AQLGAMRISEEIDALEVMAIPSVPYLVTTRVIAGFIAVIPLYVVGLLSSYLATRGVNTMI 195 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF----MACAIGIVAMKEGFAVGVHSNSL 342 F +F F + F +I F + C G A VGV ++ Sbjct: 196 QGQSTGSFDHYFHLFLPPEDVIYSFIKVIIFAFVLVMIHCYYGYTASGGPAGVGV---AV 252 Query: 343 GKKVTTCVV 351 G+ V T +V Sbjct: 253 GRAVRTTIV 261 >gi|269128542|ref|YP_003301912.1| hypothetical protein Tcur_4347 [Thermomonospora curvata DSM 43183] gi|268313500|gb|ACY99874.1| protein of unknown function DUF140 [Thermomonospora curvata DSM 43183] Length = 282 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 46/191 (24%), Positives = 93/191 (48%), Gaps = 10/191 (5%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V +V ++F TG+ + QG L+Q G ++ + S RE+ L++A+ ++ G Sbjct: 71 VAIVGFMTFFTGSQVGLQGYNSLNQIGTAAYTGFVSSYFNTRELAPLVSALALSATVGCG 130 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 A++G+M+I++EIDA+ M + V L++ R+ A +I++ L ++ ++ + +++ Sbjct: 131 FTAQLGAMRISDEIDALEVMAVPTVPFLVTTRLLAGMIAVIPLYVVGLLASYLATRLIVT 190 Query: 288 KY-------YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 + YD F +F + + + I + C G A VGV Sbjct: 191 VFYGQSTGTYDHYFNLFLPPYDILWSFGKVIVFAILVMLIHCYYGFHASGGPAGVGV--- 247 Query: 341 SLGKKVTTCVV 351 ++G+ V T +V Sbjct: 248 AVGRAVRTSIV 258 >gi|108800639|ref|YP_640836.1| hypothetical protein Mmcs_3673 [Mycobacterium sp. MCS] gi|119869778|ref|YP_939730.1| hypothetical protein Mkms_3746 [Mycobacterium sp. KMS] gi|108771058|gb|ABG09780.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119695867|gb|ABL92940.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] Length = 270 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 27/206 (13%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L+SF ++ + GA LS GA ++ ++G L+T +++AG +A Sbjct: 71 IPFTVLVSFTLNILLRELGAADLSGAGAAFGAVT--------QVGPLVTVLIVAGAGATA 122 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + A++GS I EEI A+ +G+D V+ L++PR+ A + LL L I+G Sbjct: 123 MCADLGSRTIREEISAMEVLGIDPVQRLVTPRMLASGLVALLLNSLVVIIGILGG----- 177 Query: 288 KYYDIPFAVFFSRFHSTATLANI--FTGL-------IKAPFMACAIGIVAMKEGFAV-GV 337 Y F+VF + A A I TG+ +KA G+VA G V G Sbjct: 178 --YT--FSVFIQDVNPGAFAAGITLLTGVPEMIISCVKALLFGLIAGLVACYRGLTVSGG 233 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++G V VV + + I+ L Sbjct: 234 GAKAVGNAVNETVVYAFMALFAINVL 259 >gi|120406152|ref|YP_955981.1| hypothetical protein Mvan_5204 [Mycobacterium vanbaalenii PYR-1] gi|119958970|gb|ABM15975.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 237 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 26/203 (12%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L++F ++ + GA LS G +I ++G ++T +++AG +A Sbjct: 39 IPFTVLVAFTLNILLREIGAADLSGAGTAFGTIT--------QLGPVVTVLVVAGAGATA 90 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ I EEIDA+R +G+D ++ L+ PR+ A LL L + G + Sbjct: 91 ICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLASTFVALLLNGLVCLIGLSGGYV--- 147 Query: 288 KYYDIPFAVFFSRFHSTATL--ANIFTGL-------IKAPFMACAIGIVAMKEGFAVGVH 338 F+VF + A + + TGL IKA G+V G V Sbjct: 148 ------FSVFLQGVNPGAFINGLTVLTGLGELVLAEIKALLFGVVAGLVGCYRGLTVKGG 201 Query: 339 SNSLGKKVTTCVVQSISIVIIID 361 +G V VV + + +I+ Sbjct: 202 PKGVGNAVNETVVYAFICLFVIN 224 >gi|215404242|ref|ZP_03416423.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis 02_1987] gi|218753676|ref|ZP_03532472.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis GM 1503] gi|253798988|ref|YP_003031989.1| hypothetical protein TBMG_02026 [Mycobacterium tuberculosis KZN 1435] gi|254550984|ref|ZP_05141431.1| hypothetical protein Mtube_11066 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|297634533|ref|ZP_06952313.1| hypothetical protein MtubK4_10441 [Mycobacterium tuberculosis KZN 4207] gi|253320491|gb|ACT25094.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis KZN 1435] Length = 269 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 89/173 (51%), Gaps = 2/173 (1%) Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L+ GA FS +I + + ++T +++AG +A+ A++G+ I EE+DA+R MG+ Sbjct: 85 LTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVMGI 144 Query: 250 DFVRILISPRIW-ALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + ++ L +PR+ A +SL L +++ + +IGA + + + + Sbjct: 145 NPIQALAAPRVLAATTVSLALNSVVTA-TGLIGAFFCSVFLMHVSAGAWVTGLTTLTHTV 203 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 ++ +IKA G++A +G +VG +G+ V VV + ++ +I+ Sbjct: 204 DVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLFVIN 256 >gi|291279860|ref|YP_003496695.1| ABC transporter permease [Deferribacter desulfuricans SSM1] gi|290754562|dbj|BAI80939.1| ABC transporter, permease [Deferribacter desulfuricans SSM1] Length = 258 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 73/130 (56%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 +RQ+Y+ GV +P+ I IS + G + + L G L+ +L +RE+G L+T Sbjct: 48 LRQVYFTGVQILPIYIFISLIFGIALVGILSKLLIDLGIYNELGKLLVLLIVRELGPLVT 107 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 ++++ RS +A+ AEI MK++ EI+ + +D + L PR+ A + + L+I +F Sbjct: 108 VILLSLRSSTAVGAEISVMKLSGEIETLTFFEIDPLIYLFLPRVLAGLTCMVSLSIFFSF 167 Query: 277 SAIIGASIVI 286 +I G ++I Sbjct: 168 VSITGGYLLI 177 >gi|296139954|ref|YP_003647197.1| hypothetical protein Tpau_2249 [Tsukamurella paurometabola DSM 20162] gi|296028088|gb|ADG78858.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM 20162] Length = 279 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 41/142 (28%), Positives = 76/142 (53%), Gaps = 13/142 (9%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V VV+++ TG V+ QG L Q GA + + L + + RE+ L+ A+ ++ G Sbjct: 69 VGVVLMLCGFTGIVVGLQGNAALQQLGASVMTGFLSAYVNTRELTPLVAALAMSATVGCG 128 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA---LIISLPLLTILANF-------S 277 A++G+M+I+EEIDA+ M + + L + R+ A +I L ++ +LA++ + Sbjct: 129 FTAQLGAMRISEEIDALEAMAIPSISFLTATRVIAGFVAVIPLYIVGLLASYVMTRFVNT 188 Query: 278 AIIGASIVIWKYYDIPFAVFFS 299 ++G S + +Y F +F S Sbjct: 189 TLLGQSTGTYDHY---FNLFLS 207 >gi|296169577|ref|ZP_06851197.1| integral membrane protein YrbE4a [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895843|gb|EFG75538.1| integral membrane protein YrbE4a [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 249 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 9/185 (4%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L+SF ++ + GA LS GA ++ ++G L+T +++AG +A Sbjct: 48 IPFTVLVSFTLNILLRELGAADLSGAGAAFGAVT--------QVGPLVTVLIVAGAGSTA 99 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + A++GS I EEIDA+ +G++ V+ L++PR+ A + LL L I+G + Sbjct: 100 MCADLGSRTIREEIDAMEVLGINPVQRLVTPRMLAAGLVALLLNSLVVIIGIVGGYVFSV 159 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-GVHSNSLGKKV 346 D+ F + + + +KA G+VA G + G + ++G V Sbjct: 160 FVQDVNPGAFAAGITLLTGVPEVIISCVKAALFGLIAGLVACYRGLTITGGGAKAVGNAV 219 Query: 347 TTCVV 351 VV Sbjct: 220 NETVV 224 >gi|254495378|ref|ZP_05108302.1| ABC transporter, permease protein [Polaribacter sp. MED152] gi|85819732|gb|EAQ40889.1| ABC transporter, permease protein [Polaribacter sp. MED152] Length = 234 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 20/227 (8%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 K + F +L++++ +G+ + +++ ISF G VIA Q A L + L+ Sbjct: 11 KARVFYDALLKEIEELGLKSLGIILFISFFIGGVIALQTALNLD---SAFIPRSLIGFAA 67 Query: 208 LR----EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263 R E ++++AG+ GS I + IG+M++ E+IDA+ MG++ + L+ P++ A Sbjct: 68 KRSIILEFAPTFCSIILAGKVGSYITSSIGTMRVTEQIDALEVMGINSLNHLVLPKVIAT 127 Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT------GLIKA 317 + P L L + G + + FS + L F LIK Sbjct: 128 VFFYPFLITLGMVLGMFGG------WLAGVLSGLFSGVNYIEGLQTDFQPFLIVYALIKT 181 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A I V G+ V S ++GK T VV + +I+I+I + F Sbjct: 182 LVFAFLIATVPSYHGYYVKGGSIAVGKASTQSVVWT-TILIVIANYF 227 >gi|120437216|ref|YP_862902.1| ABC-type transporter permease protein [Gramella forsetii KT0803] gi|117579366|emb|CAL67835.1| ABC-type transporter permease protein [Gramella forsetii KT0803] Length = 245 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 21/203 (10%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ----LREIGVLLTAVMIAGRSG 225 +V +SF GAV+A Q A L+ + L++ + E ++++AG+ G Sbjct: 45 IVAFLSFFIGAVVAIQTALNLNN---PLIPKSLVAFAARQSVILEFAPTFISIIMAGKVG 101 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 S I + IGSM++ E+IDA+ MG++ LI P+I A+ ++ P L +A F I GA Sbjct: 102 SFITSSIGSMRVTEQIDALEVMGINSKNYLILPKIIAM-LTYPFLIAIAMFLGIAGA--- 157 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTG------LIKAPFMACAIGIVAMKEGFAVGVHS 339 Y+ F F + L + F G IK A + V G+ + + Sbjct: 158 ---YFAAVFGGFVTSDQFLTGLQDDFNGFHLTYAFIKTFLFAFILATVPSYHGYYMKGGA 214 Query: 340 NSLGKKVTTCVVQSISIVIIIDS 362 +G+ TT V + S+V+II + Sbjct: 215 LEVGEASTTSFVWT-SVVLIITN 236 >gi|118472034|ref|YP_884758.1| hypothetical protein MSMEG_0345 [Mycobacterium smegmatis str. MC2 155] gi|118173321|gb|ABK74217.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length = 272 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/139 (30%), Positives = 75/139 (53%), Gaps = 7/139 (5%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V +V ++ TGA++A QG Q + G E + + +R I TAV ++ G+ Sbjct: 61 VAIVGFLTMTTGALVAVQGYNQFASVGVEALTGFASAFFNVRLIAPGTTAVALSATIGAG 120 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPLL---TILANFSAIIGAS 283 A++G+M+INEEIDA+ +G+ V L S R+ A +I+ +PL I++ S+ +G + Sbjct: 121 ATAQLGAMRINEEIDALEVIGIRSVSYLASTRVAAGVIVVIPLYCVAVIMSFISSRLGTT 180 Query: 284 IVIWK---YYDIPFAVFFS 299 ++ + YD F F + Sbjct: 181 VIYGQGSGVYDHYFNTFLN 199 >gi|118469614|ref|YP_884548.1| hypothetical protein MSMEG_0132 [Mycobacterium smegmatis str. MC2 155] gi|118170901|gb|ABK71797.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length = 266 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 61/235 (25%), Positives = 110/235 (46%), Gaps = 40/235 (17%) Query: 147 YKFKGFLLS---LIRQMYYVGVS-GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDL 202 +++K F+L LIR + ++ +P+ +LI F ++A+ GA +S GA + ++ Sbjct: 42 FQWKEFVLQSWFLIRVAFLPTLAVSIPLTVLIIFTLNILLAEFGAADVSGAGAALGAVT- 100 Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 ++G L+T +++AG +AI A++G+ + EEIDA+ +G+D + L+ PR+ A Sbjct: 101 -------QLGPLVTVLVVAGAGSTAICADLGARTVREEIDALEVLGIDPIERLVVPRVVA 153 Query: 263 LIISLPLLTILANFSAII--GASIVIWKYYDIPFAVFFSR-----FHSTATL----ANIF 311 + F A + GA I I F V+ + ST TL + Sbjct: 154 -----------STFVAFMLNGAVITIGLVGGFFFGVYIQNVSAGAYVSTLTLLTGFPEVL 202 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 ++KA G+V G V S +G V ++V+ + +LFA+ Sbjct: 203 ISVVKATLFGMIAGLVGCYRGLTVAGGSKGVGTAVNE------TLVLCVVALFAV 251 >gi|226364103|ref|YP_002781885.1| YrbE family protein [Rhodococcus opacus B4] gi|226242592|dbj|BAH52940.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 264 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 52/79 (65%), Gaps = 4/79 (5%) Query: 188 FQLSQFGAEIFSIDL----MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 +Q++ AEI ++DL + +REIG ++T +++AG +AI A++GS I EEIDA Sbjct: 78 YQINILLAEIGAVDLSGAGAGVAIIREIGPVVTVLVVAGAGSTAICADLGSRTIREEIDA 137 Query: 244 IRTMGLDFVRILISPRIWA 262 ++ +G+D ++ L PR+ A Sbjct: 138 MKVLGIDPIQRLCVPRVLA 156 >gi|183982884|ref|YP_001851175.1| integral membrane protein YrbE3A [Mycobacterium marinum M] gi|183176210|gb|ACC41320.1| conserved hypothetical integral membrane protein YrbE3A [Mycobacterium marinum M] Length = 282 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 42/179 (23%), Positives = 86/179 (48%), Gaps = 8/179 (4%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P ++ F+ ++ GA S G IF++D + ++T +++AG +A Sbjct: 84 IPWAVISGFLFNVLLTDIGAADFSGTGCAIFTVD--------QSAPIVTVLVVAGAGATA 135 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + A++G+ I EE+DA+R MG++ ++ L+ PR+ A L+ L + +IGA + Sbjct: 136 MCADLGARTIREELDALRVMGINPIQALVVPRVLAATTVSLALSSLVIATGLIGAFLCSV 195 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + + + + ++ +IKA G++A +G +VG +G+ V Sbjct: 196 FLMHVSAGAWVTGLTTLTHTVDVVISMIKATLFGLMAGLIACYKGISVGGGPAGVGRAV 254 >gi|300782534|ref|YP_003762825.1| ABC transporter permease [Amycolatopsis mediterranei U32] gi|41581798|gb|AAS07742.1| putative ABC-transporter permease [Amycolatopsis mediterranei S699] gi|299792048|gb|ADJ42423.1| ABC transport system permease protein [Amycolatopsis mediterranei U32] Length = 278 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 67/119 (56%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V++ ++ TG ++ QG L+ G F+ L + REI L+ + ++ G+ Sbjct: 67 VGVMVGLTLFTGVLVGLQGYSALNSIGTSAFTGFLTAFFNTREIAPLVAGLALSATVGAG 126 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A++G+M+I+EEIDA+ MG+ + L++ RI A +++ L I+ S+ + + +V+ Sbjct: 127 FTAQLGAMRISEEIDALEVMGVPSLPYLVTTRIIAGFVAVIPLYIIGLLSSYLASRLVV 185 >gi|119714948|ref|YP_921913.1| hypothetical protein Noca_0701 [Nocardioides sp. JS614] gi|119535609|gb|ABL80226.1| protein of unknown function DUF140 [Nocardioides sp. JS614] Length = 261 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 56/216 (25%), Positives = 107/216 (49%) Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 L I+Q +++ + L++ GAVIA Q + QFGA+ F+ + +++ Sbjct: 37 LREFIQQAWFIASVTIIPTALVAIPFGAVIALQVGGLIKQFGAQSFTGSASVLAVVQQAA 96 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 + TA++IAG GSAI A++G+ KI EE+DA+ +G+D ++ L+ PR+ A ++ L Sbjct: 97 PIGTALLIAGAGGSAIAADLGARKIREELDAMMVLGIDPIQRLVVPRVLAAMLVAVFLNG 156 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 L + + G + D + + F + + L +++ G+ KA +VA +G Sbjct: 157 LVSVVGVAGGYVFNVILQDGTPGAYLASFTALSQLPDLWQGMAKALVFGLIAAVVACYKG 216 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 +G V VV + ++ I++ + + Y Sbjct: 217 MNAAGGPKGVGDAVNESVVVTFILLFIVNFVMSAIY 252 >gi|326333295|ref|ZP_08199542.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] gi|325948939|gb|EGD41032.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] Length = 267 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 3/199 (1%) Query: 171 VILISFVTGAV---IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V++I F+T A + Q G S + RE+ ++ + + G+ Sbjct: 57 VLVIGFLTAASGIEVGLQAYTSFDNIGVSALSGFFSAYFNTREVAPIIAGIALTATVGAG 116 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 A+IG+M+++EEIDA+ M + V L++ RI A +I++ L +A + +V+ Sbjct: 117 FTAQIGAMRVSEEIDALEVMAVPPVPYLVTTRIMAGLIAVIPLYAIAVMMCWLATRLVVT 176 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 YD + F + ++F ++K MA + V GF +G+ V Sbjct: 177 VGYDEAPGTYQHYFDTFLIPGDLFLSMLKVTIMALVVVSVCCYHGFKAAGGPAGVGRAVG 236 Query: 348 TCVVQSISIVIIIDSLFAI 366 V ++ ++ +D +F I Sbjct: 237 RAVRSALIAIMFVDLIFGI 255 >gi|226365582|ref|YP_002783365.1| YrbE family protein [Rhodococcus opacus B4] gi|226244072|dbj|BAH54420.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 269 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 32/98 (32%), Positives = 58/98 (59%), Gaps = 8/98 (8%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P+ +LI+ G++ Q GAE ++ ++ + + + L+ A+M+AG GSA Sbjct: 67 IPIGVLIAVTIGSLA--------GQLGAEGYTGAVVGFVIVGQASALVCALMLAGVGGSA 118 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 I A++GS I EE++A+ +GLD + L+ PR+ A +I Sbjct: 119 ICADLGSRTIREEVEAMEVLGLDVIERLVVPRVLAAVI 156 >gi|296141835|ref|YP_003649078.1| hypothetical protein Tpau_4170 [Tsukamurella paurometabola DSM 20162] gi|296029969|gb|ADG80739.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM 20162] Length = 285 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 36/131 (27%), Positives = 66/131 (50%) Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 ++G+ I +E+DA+RTMG+D V L++PR+ A ++ PLL + I+ A V Sbjct: 139 DLGARTIRDEVDALRTMGIDPVHRLVAPRLIAAVVVAPLLNLFIVVVGILAAFYVAVLGQ 198 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 D+ ++ F + AT+ ++ ++KA I IV + G + + V V Sbjct: 199 DVTPGSYWLSFGAYATVRDLGFSMVKAALFGAIIAIVGCQHGLEAKGGARGVADAVNATV 258 Query: 351 VQSISIVIIID 361 V S +I+++ Sbjct: 259 VVSTVAIIVLN 269 >gi|118470891|ref|YP_884757.1| hypothetical protein MSMEG_0344 [Mycobacterium smegmatis str. MC2 155] gi|118172178|gb|ABK73074.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length = 256 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 49/73 (67%) Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L +FGA FS +I + +IG ++T +++AG +A+ A++G+ I EE+DA+R MG+ Sbjct: 72 LIEFGAADFSGTGAAIGTVSQIGPIVTVLVVAGAGSTAMCADLGARTIREELDAMRVMGI 131 Query: 250 DFVRILISPRIWA 262 D ++ L+ PR+ A Sbjct: 132 DPIQALVVPRVLA 144 >gi|302525040|ref|ZP_07277382.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4] gi|302433935|gb|EFL05751.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4] Length = 272 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 10/189 (5%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V++ ++ TG V+ QG L+Q G F+ + + REI L+ + ++ G Sbjct: 63 VMVGMTVATGTVVGLQGYSALNQVGTSAFAGFISAYFNTREIAPLVAGLALSATVGCGFT 122 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTILANFSAIIGASIVIWK 288 A++G+M+I+EEIDA+ MG+ V L++ R+ A I+ +PL + S + + +W Sbjct: 123 AQLGAMRISEEIDALEVMGIPSVPYLVTTRVIAGFIAVIPLYAVGLLSSYLASRQVTVWG 182 Query: 289 Y------YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 + YD F +F + + + C G A VGV ++ Sbjct: 183 FGQSAGTYDHYFLLFLPPGDVLWSFGKVLIFSVVVVLAHCYYGFRASGGPAGVGV---AV 239 Query: 343 GKKVTTCVV 351 G+ V T +V Sbjct: 240 GRAVRTAIV 248 >gi|108797254|ref|YP_637451.1| hypothetical protein Mmcs_0274 [Mycobacterium sp. MCS] gi|119866339|ref|YP_936291.1| hypothetical protein Mkms_0284 [Mycobacterium sp. KMS] gi|126432878|ref|YP_001068569.1| hypothetical protein Mjls_0265 [Mycobacterium sp. JLS] gi|108767673|gb|ABG06395.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119692428|gb|ABL89501.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] gi|126232678|gb|ABN96078.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 285 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 63/106 (59%), Gaps = 4/106 (3%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V+++ F+T G +A QG L G E + L + + +R ++ + +A G+ Sbjct: 74 VVIVGFLTLAAGGTLAVQGYSSLGDIGIEALTGFLAAFINVRISAPVVAGIGLAATFGAG 133 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTI 272 + A++G+M+INEE+DA+ TMG+ + L+S RI A +I++ PL ++ Sbjct: 134 VTAQLGAMRINEEVDALETMGIRPIEYLVSTRIIAGMIAITPLYSV 179 >gi|145223094|ref|YP_001133772.1| hypothetical protein Mflv_2507 [Mycobacterium gilvum PYR-GCK] gi|145215580|gb|ABP44984.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] Length = 285 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 63/106 (59%), Gaps = 4/106 (3%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V+++ F+T G +A QG L G E + L + + +R ++ + +A G+ Sbjct: 74 VVIVGFLTLAAGGTLAIQGYSSLGDIGIEALTGFLAAFINVRIAAPVVAGIGLAATFGAG 133 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTI 272 + A++G+M+INEEIDA+ +MG+ V L+S RI A ++++ PL +I Sbjct: 134 VTAQLGAMRINEEIDALESMGIRPVEYLVSTRIVAGMVAITPLYSI 179 >gi|120405105|ref|YP_954934.1| hypothetical protein Mvan_4151 [Mycobacterium vanbaalenii PYR-1] gi|119957923|gb|ABM14928.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 285 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 63/106 (59%), Gaps = 4/106 (3%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V+++ F+T G +A QG L G E + L + + +R ++ + +A G+ Sbjct: 74 VVIVGFLTLAAGGTLAIQGYSSLGNIGIEALTGFLAAFINVRIAAPVVAGIGLAATFGAG 133 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTI 272 + A++G+M+INEEIDA+ +MG+ V L+S RI A ++++ PL +I Sbjct: 134 VTAQLGAMRINEEIDALESMGIRPVEYLVSTRIVAGMVAIAPLYSI 179 >gi|296166535|ref|ZP_06848966.1| membrane protein YrbE4A [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898147|gb|EFG77722.1| membrane protein YrbE4A [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 254 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 26/203 (12%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L++F ++ + GA LS G +I ++G ++T +++AG +A Sbjct: 56 IPFTVLVAFTLNILLREIGAADLSGAGTAFGTIT--------QLGPVVTVLVVAGAGATA 107 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ I EEIDA+R +G+D V L+ PR+ A + LL L + G + Sbjct: 108 ICADLGARTIREEIDAMRVLGIDPVHRLVVPRVLASTVVALLLNGLVCAIGLSGGYV--- 164 Query: 288 KYYDIPFAVFFSRFHSTATL--ANIFTGL-------IKAPFMACAIGIVAMKEGFAVGVH 338 F+VF + A + + TGL +KA G+V G V Sbjct: 165 ------FSVFLQGVNPGAFINGLTVLTGLRELVLAEVKALLFGVMAGLVGCYRGLTVKGG 218 Query: 339 SNSLGKKVTTCVVQSISIVIIID 361 +G V VV + + +I+ Sbjct: 219 PKGVGNAVNETVVYAFICLFVIN 241 >gi|118469369|ref|YP_889051.1| ABC transporter transmembrane protein [Mycobacterium smegmatis str. MC2 155] gi|118170656|gb|ABK71552.1| ABC-transporter integral membrane protein [Mycobacterium smegmatis str. MC2 155] Length = 282 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 61/106 (57%), Gaps = 1/106 (0%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V +V ++ TG V+A QG L G E + L + + +R ++ + +A G+ Sbjct: 71 VVIVGFLTLATGGVLAIQGYSSLGNIGIEALTGFLSAFINVRIAAPVVAGIGLAATFGAG 130 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTI 272 + A++G+M+INEEIDA+ +M + V L+S RI A +I++ PL I Sbjct: 131 VTAQLGAMRINEEIDALESMAIRPVEYLVSTRIVAGMIAITPLYAI 176 >gi|254820119|ref|ZP_05225120.1| hypothetical protein MintA_09341 [Mycobacterium intracellulare ATCC 13950] Length = 256 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 22/183 (12%) Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L +FGA FS ++ + +IG L+T +++AG +A+ A++G+ I EE+DA+R +G+ Sbjct: 73 LIEFGAGDFSGSGAALATVTQIGPLVTVLVVAGAGATAMCADLGARTIREELDALRVLGI 132 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAII--GASIVIWKYYDIPFAVFFSRFH--STA 305 + + L+ PR+ A A F +++ G IV F+VF S A Sbjct: 133 NPIGSLVVPRVLA-----------ATFVSLLLSGVVIVTGLVGGFEFSVFVQHVTPGSFA 181 Query: 306 TLANIFTG-------LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + TG L+KA ++A +G +VG + ++G V VV S + Sbjct: 182 AGLTLLTGARELVIALVKAGLFGLTASLIACYKGISVGRGAAAVGNAVNETVVFSFMSLF 241 Query: 359 IID 361 ID Sbjct: 242 FID 244 >gi|120405106|ref|YP_954935.1| hypothetical protein Mvan_4152 [Mycobacterium vanbaalenii PYR-1] gi|119957924|gb|ABM14929.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 269 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 27/204 (13%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L+SF ++ + GA LS GA ++ ++G L+T +++AG +A Sbjct: 70 IPFTVLVSFTLNILLRELGAADLSGAGAAFGAVT--------QVGPLVTVLIVAGAGATA 121 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + A++GS I EEIDA+ +G++ V+ L++PR+ A + LL L I+G Sbjct: 122 MCADLGSRTIREEIDAMEVLGINPVQRLVTPRMLAAGLVALLLNSLVVIIGILGG----- 176 Query: 288 KYYDIPFAVFFSRFHSTATLANI--FTGL-------IKAPFMACAIGIVAMKEGFAV-GV 337 Y+ F+VF + A A I TG+ +KA G+VA G + G Sbjct: 177 -YF---FSVFVQDVNPGAFAAGITLLTGVPEVIISCVKAALFGLIAGLVACYRGLTITGG 232 Query: 338 HSNSLGKKVTTCVVQSISIVIIID 361 + ++G V VV + + +I+ Sbjct: 233 GAKAVGNAVNETVVYAFMALFVIN 256 >gi|315443551|ref|YP_004076430.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|315261854|gb|ADT98595.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 285 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 63/106 (59%), Gaps = 4/106 (3%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V+++ F+T G +A QG L G E + L + + +R ++ + +A G+ Sbjct: 74 VVIVGFLTLAAGGTLAIQGYSSLGDIGIEALTGFLAAFINVRIAAPVVAGIGLAATFGAG 133 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTI 272 + A++G+M+INEEIDA+ +MG+ V L+S RI A ++++ PL +I Sbjct: 134 VTAQLGAMRINEEIDALESMGIRPVEYLVSTRIVAGMVAITPLYSI 179 >gi|296179481|gb|ADG96486.1| SupB [Gordonia cholesterolivorans] Length = 287 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 50/194 (25%), Positives = 90/194 (46%), Gaps = 3/194 (1%) Query: 171 VILISFVTGAV---IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V++I F+T A + QQG+ L + G E S + + RE ++ V + GS Sbjct: 75 VVIIGFLTAAAGYEVGQQGSSSLGRVGVEAMSGFISAFFNTREAIPVIAGVALTATVGSG 134 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 A++G+M+++EEIDA+ M + + L+S RI A ++++ L +A F+ V Sbjct: 135 FTAQLGAMRVSEEIDALEVMSVQSLPYLVSTRIAAGLVAIIPLYAIALFTGYAATKFVSV 194 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 D + F +++ L+K MA A+ V G+ +G V Sbjct: 195 FLSDQSPGTYDHYFQLFLQPSDVAISLLKVIVMAVAVMAVHCYYGYNASGGPAGVGVAVG 254 Query: 348 TCVVQSISIVIIID 361 V S+ I++++D Sbjct: 255 HAVRTSLIIIMVVD 268 >gi|108798493|ref|YP_638690.1| hypothetical protein Mmcs_1523 [Mycobacterium sp. MCS] gi|108768912|gb|ABG07634.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] Length = 272 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 56/200 (28%), Positives = 102/200 (51%), Gaps = 20/200 (10%) Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 ++ TGA++A QG Q + G E + + +R IG ++ + +A G+ A++G Sbjct: 67 LTLSTGALVAVQGYNQFADVGVEALTGFASAYFNVRLIGPVIAGIGLAATIGAGATAQLG 126 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL--LTILANFSAIIGASIVIWKYY 290 +M+INEEIDA+ MG+ V L S R+ A +I+ +PL + +L+ F A +I I+ Sbjct: 127 AMRINEEIDALEVMGVRSVAYLASSRVLAGVIVVIPLYCVAVLSAFWAARFGTIAIYGQS 186 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM---------KEGFAVGVHSNS 341 + +F+ F ++ T +I + F A A+ IV M G GV + Sbjct: 187 SGVYDHYFTTFLNS-------TDIIWSFFQAIAMAIVIMLVHTYYGFTATGGPAGV-GEA 238 Query: 342 LGKKVTTCVVQSISIVIIID 361 +G+ V T ++ ++ +V+ + Sbjct: 239 VGRAVRTSLIAAVLVVLFLS 258 >gi|111018969|ref|YP_701941.1| hypothetical protein RHA1_ro01972 [Rhodococcus jostii RHA1] gi|110818499|gb|ABG93783.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length = 274 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 66/116 (56%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V+ ++S TG V+ QG L Q G+ + + L + + REI ++ A+ ++ G Sbjct: 65 VIAMMSGFTGVVVGLQGFAALEQLGSSVLTGFLSAYVNTREIAPIVAALALSATVGCGFT 124 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 A++G+M+I+EEIDA+ M + V L++ R+ A +++ L I+ +A + + I+ Sbjct: 125 AQLGAMRISEEIDALEVMAVPSVPFLVTTRMIAGFVAVIPLYIVGLLAAYLASRII 180 >gi|298208113|ref|YP_003716292.1| hypothetical protein CA2559_07665 [Croceibacter atlanticus HTCC2559] gi|83850754|gb|EAP88622.1| hypothetical protein CA2559_07665 [Croceibacter atlanticus HTCC2559] Length = 233 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 69/122 (56%), Gaps = 8/122 (6%) Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ----LREIGVLLTAVMI 220 +S + +V ISF GAV++ Q A L+ + +L+ + E +V++ Sbjct: 28 MSSLGIVTFISFFIGAVVSIQTALNLNN---PLIPKELIGFAARQSIILEFAPTFISVIM 84 Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280 AG+ GS I + IG+M++ E+IDA+ MG++ + L+ P+I A++I P L +A F I+ Sbjct: 85 AGKVGSYITSSIGTMRVTEQIDALEVMGINSLNYLVLPKIVAMMI-YPFLIGIAMFIGIL 143 Query: 281 GA 282 GA Sbjct: 144 GA 145 >gi|111021669|ref|YP_704641.1| hypothetical protein RHA1_ro04697 [Rhodococcus jostii RHA1] gi|110821199|gb|ABG96483.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length = 283 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 49/169 (28%), Positives = 87/169 (51%), Gaps = 6/169 (3%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V +V ++ TG IA QG L G E + + + +R ++ + +A G+ Sbjct: 72 VVIVGFLTLFTGGTIAVQGYSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGLAATIGAG 131 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPL--LTILANFSAIIGASI 284 A++G+M+++EEIDA+ TM + + L+S R+ A +I+ +PL L ++A+F A A++ Sbjct: 132 STAQLGAMRVSEEIDALETMAIPSIPYLVSTRVMAGMIAIIPLYALAVIASFMASRFATV 191 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 V+ YD V+ F + +I +A MA AI ++ GF Sbjct: 192 VL---YDQSSGVYDHYFSTFLIPTDILWSFAQAIVMAIAIMLIHTYYGF 237 >gi|262201121|ref|YP_003272329.1| hypothetical protein Gbro_1128 [Gordonia bronchialis DSM 43247] gi|262084468|gb|ACY20436.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247] Length = 268 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 57/207 (27%), Positives = 108/207 (52%), Gaps = 10/207 (4%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I+Q +++ + LI+ GA+++ Q + Q GAE ++ ++ +++ L+T Sbjct: 48 IQQAWFIASVTILPTALIAIPFGAIVSLQTGSLIKQLGAESYTGAASVLVVIQQGSPLVT 107 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 +++IAG +GSA+ A++GS I EEIDA+ +G++ ++ L+ PR+ A+++ LL L Sbjct: 108 SLLIAGAAGSAVAADLGSRTIREEIDAMEVLGINPIQRLVVPRVLAMVLVAMLLNGLVAV 167 Query: 277 SAIIGA---SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 I G ++V+ P A + + F + A L +++ +KA G+VA +G Sbjct: 168 IGIGGGYFFNVVVQG--GTPGA-YLASFGALAQLPDLYVSTLKAAIFGVLAGVVAAYKGL 224 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIII 360 H K V V QS+ I ++ Sbjct: 225 ----HPKGGPKGVGDAVNQSVVITFLL 247 >gi|119867594|ref|YP_937546.1| hypothetical protein Mkms_1546 [Mycobacterium sp. KMS] gi|119693683|gb|ABL90756.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] Length = 284 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 56/200 (28%), Positives = 102/200 (51%), Gaps = 20/200 (10%) Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 ++ TGA++A QG Q + G E + + +R IG ++ + +A G+ A++G Sbjct: 79 LTLSTGALVAVQGYNQFADVGVEALTGFASAYFNVRLIGPVIAGIGLAATIGAGATAQLG 138 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL--LTILANFSAIIGASIVIWKYY 290 +M+INEEIDA+ MG+ V L S R+ A +I+ +PL + +L+ F A +I I+ Sbjct: 139 AMRINEEIDALEVMGVRSVAYLASSRVLAGVIVVIPLYCVAVLSAFWAARFGTIAIYGQS 198 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM---------KEGFAVGVHSNS 341 + +F+ F ++ T +I + F A A+ IV M G GV + Sbjct: 199 SGVYDHYFTTFLNS-------TDIIWSFFQAIAMAIVIMLVHTYYGFTATGGPAGV-GEA 250 Query: 342 LGKKVTTCVVQSISIVIIID 361 +G+ V T ++ ++ +V+ + Sbjct: 251 VGRAVRTSLIAAVLVVLFLS 270 >gi|169631107|ref|YP_001704756.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977] gi|169243074|emb|CAM64102.1| Putative YrbE family protein [Mycobacterium abscessus] Length = 320 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 95/179 (53%), Gaps = 1/179 (0%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 ++I+ + + V+ VP IL+S G ++A Q +SQ GA S + +++ + Sbjct: 99 TVIQSWFILTVTVVPA-ILVSIPFGVIVAVQAGSIISQVGASSISGAAGGLGVIQQGAPI 157 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 + A+++ G +GSA+ ++G+ I EE+DA+R MG++ V+ L++PR+ A++ PLL I Sbjct: 158 VAALLLGGAAGSAVATDLGARSIREEVDAMRVMGVNPVQRLVTPRLAAILFVSPLLCIFI 217 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 F I +V + + S F + A ++++ ++K + +VA + G Sbjct: 218 IFVGIFAGYLVNVGFQGGTPGSYLSSFAAFANVSDVTVAVLKTWLFGVVVILVACQRGL 276 >gi|254822745|ref|ZP_05227746.1| hypothetical protein MintA_22639 [Mycobacterium intracellulare ATCC 13950] Length = 237 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 26/203 (12%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L++F ++ + GA LS G +I ++G ++T +++AG +A Sbjct: 39 IPFTVLVAFTLNILLREIGAADLSGAGTAFGTIT--------QLGPVVTVLVVAGAGATA 90 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ I EEIDA+R +G+D ++ L+ PR+ A + LL L + G + Sbjct: 91 ICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLASTVVALLLNGLVCAIGLSGGYV--- 147 Query: 288 KYYDIPFAVFFSRFHSTATL--ANIFTGL-------IKAPFMACAIGIVAMKEGFAVGVH 338 F+VF + A + + TGL +KA G+V G V Sbjct: 148 ------FSVFLQGVNPGAFINGLTVLTGLRELVLAEVKALLFGVMAGMVGCYRGLTVKGG 201 Query: 339 SNSLGKKVTTCVVQSISIVIIID 361 +G V VV + + +I+ Sbjct: 202 PKGVGNAVNETVVYAFICLFVIN 224 >gi|289645180|ref|ZP_06477195.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] gi|289505005|gb|EFD26088.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] Length = 283 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 15/207 (7%) Query: 173 LISFVTGAVIAQ---QGAFQLSQFGAE----IFSIDLMSILQLREIGVLLTAVMIAGRSG 225 +I F+ G + A+ +G + LSQ GA +F+ + G +L+A + G Sbjct: 74 IIWFMMGMLAAEASLEGHYLLSQLGAGSYTGVFTSTADYTVAPEMWGWILSAKVACG--- 130 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 +VAE+GSM+I+EEIDA+ MGLD LIS R+ A+II P + ++ + G V Sbjct: 131 --LVAELGSMRISEEIDALEVMGLDPHSYLISTRLLAVIIITPFMFMIGT-GIMYGVQYV 187 Query: 286 --IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 + ++ + + S F + T ++ L M I V G+ +G Sbjct: 188 LNVHVFHSVSAGGYLSVFWAFQTQQDVLLSLAMGAIMGMMIVTVGCYYGYTASGGPVGVG 247 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370 K +V ++ IV ++ ++F +F Sbjct: 248 KNTAKSMVINLVIVSVVGAVFQQMFFG 274 >gi|302523959|ref|ZP_07276301.1| ABC transporter integral membrane protein [Streptomyces sp. AA4] gi|302432854|gb|EFL04670.1| ABC transporter integral membrane protein [Streptomyces sp. AA4] Length = 278 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/119 (27%), Positives = 67/119 (56%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V++ ++ TG ++ QG L+ G F+ L + REI L+ + ++ G+ Sbjct: 67 VGVMVGLTLFTGVLVGLQGYSALNSIGTSAFTGFLTAFFNTREIAPLVAGLALSATVGAG 126 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A++G+M+I+EEIDA+ MG+ + L++ RI A +++ L ++ S+ + + +V+ Sbjct: 127 FTAQLGAMRISEEIDALEVMGVPSLPYLVTTRIIAGFVAVIPLYVIGLLSSYLASRLVV 185 >gi|145222146|ref|YP_001132824.1| hypothetical protein Mflv_1554 [Mycobacterium gilvum PYR-GCK] gi|145214632|gb|ABP44036.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] Length = 237 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 8/194 (4%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L++F ++ + GA LS G +I ++G ++T +++AG +A Sbjct: 39 IPFTVLVAFTLNILLREIGAADLSGAGTAFGTIT--------QLGPVVTVLVVAGAGATA 90 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ I EEIDA+R +G+D ++ L+ PR+ A LL L + G + Sbjct: 91 ICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLASTFVALLLNGLVCLIGLSGGYVFSV 150 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + F + L + IKA G+V G V +G V Sbjct: 151 FLQGVNPGSFINGLTVLTGLPELILAEIKALLFGVVAGLVGCYRGLTVKGGPKGVGNAVN 210 Query: 348 TCVVQSISIVIIID 361 VV + + +I+ Sbjct: 211 ETVVYAFICLFVIN 224 >gi|118619254|ref|YP_907586.1| membrane protein YrbE4A [Mycobacterium ulcerans Agy99] gi|118571364|gb|ABL06115.1| conserved membrane protein YrbE4A [Mycobacterium ulcerans Agy99] Length = 279 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 26/203 (12%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L++F ++ + GA LS G +I ++G ++T +++AG +A Sbjct: 81 IPFTVLVAFTLNILLREIGAADLSGAGTAFGTIT--------QLGPVVTVLVVAGAGATA 132 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ I EEIDA+R +G+D ++ L+ PR+ A S + +L IG S Sbjct: 133 ICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLA---STVVALLLNGLVCAIGLS---- 185 Query: 288 KYYDIPFAVFFSRFHSTATLAN--IFTGL-------IKAPFMACAIGIVAMKEGFAVGVH 338 F+VF + A + + TGL IKA G+V G V Sbjct: 186 --GGYAFSVFLQGVNPGAFINGLTVLTGLRELILAEIKALLFGVMAGLVGCYRGLTVKGG 243 Query: 339 SNSLGKKVTTCVVQSISIVIIID 361 +G V VV + + +I+ Sbjct: 244 PKGVGNAVNETVVYAFICLFVIN 266 >gi|284042176|ref|YP_003392516.1| hypothetical protein Cwoe_0708 [Conexibacter woesei DSM 14684] gi|283946397|gb|ADB49141.1| protein of unknown function DUF140 [Conexibacter woesei DSM 14684] Length = 272 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 102/197 (51%), Gaps = 1/197 (0%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P+++ ++ ++ +V Q A L FGA L + +RE ++ A+++AG +G+A Sbjct: 62 LPLILTMACISYSVPGLQAANFLMLFGALDRMGGLFVLAVIREFAPIVCAIVVAGAAGTA 121 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ KI EE+DA++ +G+D V+ L+ PR ALI L + A I G + Sbjct: 122 ITADLGARKIREELDALQVLGVDPVKNLVVPRFLALIAITALFDVFAIVFGITGG-LAAT 180 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 D FF+ F ++++ +++ L+K IV +G V + +G+ V Sbjct: 181 LLNDARIEPFFATFWTSSSTTDLWGSLLKCTIFGGVTAIVCCYKGMTVSGGAAGVGRAVN 240 Query: 348 TCVVQSISIVIIIDSLF 364 +V + + +++ +F Sbjct: 241 QAIVIAFLAIGVVNYVF 257 >gi|226364206|ref|YP_002781988.1| YrbE family protein [Rhodococcus opacus B4] gi|226242695|dbj|BAH53043.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 283 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 49/169 (28%), Positives = 87/169 (51%), Gaps = 6/169 (3%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V +V ++ TG IA QG L G E + + + +R ++ + +A G+ Sbjct: 72 VVIVGFLTLFTGGTIAVQGYSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGLAATIGAG 131 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPL--LTILANFSAIIGASI 284 A++G+M+++EEIDA+ TM + + L+S R+ A +I+ +PL L ++A+F A A++ Sbjct: 132 STAQLGAMRVSEEIDALETMAIPSIPYLVSTRVMAGMIAIIPLYALAVIASFMASRFATV 191 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 V+ YD V+ F + +I +A MA AI ++ GF Sbjct: 192 VL---YDQSSGVYDHYFSTFLIPTDILWSFAQAIVMAIAIMLIHTYYGF 237 >gi|15843113|ref|NP_338150.1| hypothetical protein MT3605 [Mycobacterium tuberculosis CDC1551] gi|13883459|gb|AAK47964.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] Length = 237 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 26/203 (12%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L++F ++ + GA LS G +I ++G ++T +++AG +A Sbjct: 39 IPFTVLVAFTLNILLREIGAADLSGAGTAFGTIT--------QLGPVVTVLVVAGAGATA 90 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ I EEIDA+R +G+D ++ L+ PR+ A L+ +L N G I Sbjct: 91 ICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLAST----LVALLLN-----GLVCAIG 141 Query: 288 KYYDIPFAVFFSRFHSTATL--ANIFTGL-------IKAPFMACAIGIVAMKEGFAVGVH 338 F+VF + A + + TGL IKA G+V G V Sbjct: 142 LSGGYAFSVFLQGVNPGAFINGLTVLTGLRELILAEIKALLFGVMAGLVGCYRGLTVKGG 201 Query: 339 SNSLGKKVTTCVVQSISIVIIID 361 +G V VV + + +I+ Sbjct: 202 PKGVGNAVNETVVYAFICLFVIN 224 >gi|240170056|ref|ZP_04748715.1| membrane protein YrbE4A [Mycobacterium kansasii ATCC 12478] Length = 254 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 26/203 (12%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L++F ++ + GA LS G +I ++G ++T +++AG +A Sbjct: 56 IPFTVLVAFTLNILLREIGAADLSGAGTAFGTIT--------QLGPVVTVLVVAGAGATA 107 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ I EEIDA+R +G+D ++ L+ PR+ A + LL L + G + Sbjct: 108 ICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLASTLVALLLNGLVCAIGLSGGYV--- 164 Query: 288 KYYDIPFAVFFSRFHSTATL--ANIFTGL-------IKAPFMACAIGIVAMKEGFAVGVH 338 F+VF + A + + TGL +KA G+V G V Sbjct: 165 ------FSVFLQGVNPGAFINGLTVLTGLRELILAEVKALLFGVMAGLVGCYRGLTVKGG 218 Query: 339 SNSLGKKVTTCVVQSISIVIIID 361 +G V VV + + +I+ Sbjct: 219 PKGVGNAVNETVVYAFICLFVIN 241 >gi|118470037|ref|YP_890128.1| hypothetical protein MSMEG_5902 [Mycobacterium smegmatis str. MC2 155] gi|118171324|gb|ABK72220.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length = 254 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 26/203 (12%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L++F ++ + GA LS G +I ++G ++T +++AG +A Sbjct: 56 IPFTVLVAFTLNILLREIGAADLSGAGTAFGTIT--------QLGPVVTVLVVAGAGATA 107 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ I EEIDA+R +G+D ++ L+ PR+ A LL L + G + Sbjct: 108 ICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGLAGGYV--- 164 Query: 288 KYYDIPFAVFFSRFHSTATL--ANIFTGL-------IKAPFMACAIGIVAMKEGFAVGVH 338 F+VF + A + + TGL IKA G+V G V Sbjct: 165 ------FSVFLQGVNPGAFINGLTVLTGLGELVLAEIKALLFGVVAGLVGCYRGLTVKGG 218 Query: 339 SNSLGKKVTTCVVQSISIVIIID 361 +G V VV + + +I+ Sbjct: 219 PKGVGNAVNETVVYAFICLFVIN 241 >gi|225010488|ref|ZP_03700959.1| protein of unknown function DUF140 [Flavobacteria bacterium MS024-3C] gi|225005317|gb|EEG43268.1| protein of unknown function DUF140 [Flavobacteria bacterium MS024-3C] Length = 245 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 74/137 (54%), Gaps = 11/137 (8%) Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ-- 207 +G +L I ++ Y + +VI +SF G V+ Q A L+ + + +L+ Sbjct: 28 RGLILKEIDELIY---GSMGIVIFVSFFIGGVVTIQTALNLN---SPLIPKNLIGFAARQ 81 Query: 208 --LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 + E T++++AG+ GS I + IGSM++ E+IDA+ MG++ + L+ P+I AL++ Sbjct: 82 SVILEFAPTFTSIIMAGKVGSFITSSIGSMRVTEQIDALEVMGINSLNYLVFPKIIALLM 141 Query: 266 SLPLLTILANFSAIIGA 282 P + +A + I G Sbjct: 142 -YPFVIAIAMYLGIFGG 157 >gi|145221308|ref|YP_001131986.1| hypothetical protein Mflv_0713 [Mycobacterium gilvum PYR-GCK] gi|315441804|ref|YP_004074683.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|145213794|gb|ABP43198.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] gi|315260107|gb|ADT96848.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 265 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 53/226 (23%), Positives = 105/226 (46%), Gaps = 18/226 (7%) Query: 145 SSYKFKGFLLS---LIRQMYYVGVS-GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSI 200 + ++++ F+L L+R + V+ +P+ +L+ F ++ + GA +S GA + ++ Sbjct: 39 TPFQWREFILQSWFLLRVAFLPTVAVSIPLTVLLIFTLNILLTEFGAADISGAGAALGAV 98 Query: 201 DLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRI 260 ++G L+T +++AG +AI A++G+ I EEIDA+ +G+D + L+ PR+ Sbjct: 99 T--------QLGPLVTVLVVAGAGSTAICADLGARTIREEIDALEVLGIDPIHRLVVPRV 150 Query: 261 WALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320 A LL ++G I ++ + S L + L+KA Sbjct: 151 IASTFVAMLLNGAVITIGLVGGFIFGVYLQNVSAGAYVSTLTLVTGLPEVLISLVKALTF 210 Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 G+V G V + +G V ++V+ + +LFA+ Sbjct: 211 GLIAGLVGCYRGLTVAGGAKGVGTAVNE------TLVLCVIALFAV 250 >gi|15610637|ref|NP_218018.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis H37Rv] gi|31794677|ref|NP_857170.1| integral membrane protein YrbE4a [Mycobacterium bovis AF2122/97] gi|121639420|ref|YP_979644.1| integral membrane protein YrbE4a [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148663365|ref|YP_001284888.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis H37Ra] gi|148824708|ref|YP_001289462.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis F11] gi|167967132|ref|ZP_02549409.1| conserved membrane protein YrbE4A [Mycobacterium tuberculosis H37Ra] gi|215405542|ref|ZP_03417723.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis 02_1987] gi|215413414|ref|ZP_03422098.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis 94_M4241A] gi|215429007|ref|ZP_03426926.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis T92] gi|215432469|ref|ZP_03430388.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis EAS054] gi|215447834|ref|ZP_03434586.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis T85] gi|218755278|ref|ZP_03534074.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis GM 1503] gi|219559568|ref|ZP_03538644.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis T17] gi|224991916|ref|YP_002646605.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253800543|ref|YP_003033544.1| hypothetical protein TBMG_03546 [Mycobacterium tuberculosis KZN 1435] gi|254234087|ref|ZP_04927412.1| hypothetical integral membrane protein yrbE4A [Mycobacterium tuberculosis C] gi|254366847|ref|ZP_04982888.1| hypothetical integral membrane protein yrbE4A [Mycobacterium tuberculosis str. Haarlem] gi|254552603|ref|ZP_05143050.1| hypothetical protein Mtube_19505 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260188553|ref|ZP_05766027.1| hypothetical protein MtubCP_21377 [Mycobacterium tuberculosis CPHL_A] gi|260202680|ref|ZP_05770171.1| hypothetical protein MtubT4_21968 [Mycobacterium tuberculosis T46] gi|260206868|ref|ZP_05774359.1| hypothetical protein MtubK8_21506 [Mycobacterium tuberculosis K85] gi|289445098|ref|ZP_06434842.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis T46] gi|289449203|ref|ZP_06438947.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis CPHL_A] gi|289555767|ref|ZP_06444977.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis KZN 605] gi|289571734|ref|ZP_06451961.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis T17] gi|289576235|ref|ZP_06456462.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis K85] gi|289747337|ref|ZP_06506715.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis 02_1987] gi|289752222|ref|ZP_06511600.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis T92] gi|289755631|ref|ZP_06515009.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis EAS054] gi|289759660|ref|ZP_06519038.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|289763681|ref|ZP_06523059.1| hypothetical integral membrane protein yrbE4A [Mycobacterium tuberculosis GM 1503] gi|294995729|ref|ZP_06801420.1| hypothetical protein Mtub2_14793 [Mycobacterium tuberculosis 210] gi|297636157|ref|ZP_06953937.1| hypothetical protein MtubK4_18625 [Mycobacterium tuberculosis KZN 4207] gi|297733157|ref|ZP_06962275.1| hypothetical protein MtubKR_18795 [Mycobacterium tuberculosis KZN R506] gi|298526981|ref|ZP_07014390.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|306777851|ref|ZP_07416188.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu001] gi|306782582|ref|ZP_07420919.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu002] gi|306786400|ref|ZP_07424722.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu003] gi|306790769|ref|ZP_07429091.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu004] gi|306795299|ref|ZP_07433601.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu005] gi|306799487|ref|ZP_07437789.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu006] gi|306805333|ref|ZP_07442001.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu008] gi|306809519|ref|ZP_07446187.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu007] gi|306969626|ref|ZP_07482287.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu009] gi|306973969|ref|ZP_07486630.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu010] gi|307081677|ref|ZP_07490847.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu011] gi|307086285|ref|ZP_07495398.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu012] gi|313660488|ref|ZP_07817368.1| hypothetical protein MtubKV_18790 [Mycobacterium tuberculosis KZN V2475] gi|2924438|emb|CAA17738.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE4A [Mycobacterium tuberculosis H37Rv] gi|31620274|emb|CAD95717.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE4A [Mycobacterium bovis AF2122/97] gi|121495068|emb|CAL73554.1| Conserved hypothetical integral membrane protein yrbE4A [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124599616|gb|EAY58720.1| hypothetical integral membrane protein yrbE4A [Mycobacterium tuberculosis C] gi|134152356|gb|EBA44401.1| hypothetical integral membrane protein yrbE4A [Mycobacterium tuberculosis str. Haarlem] gi|148507517|gb|ABQ75326.1| conserved hypothetical integral membrane protein YrbE4a [Mycobacterium tuberculosis H37Ra] gi|148723235|gb|ABR07860.1| hypothetical integral membrane protein yrbE4A [Mycobacterium tuberculosis F11] gi|224775031|dbj|BAH27837.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253322046|gb|ACT26649.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis KZN 1435] gi|289418017|gb|EFD15257.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis T46] gi|289422161|gb|EFD19362.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis CPHL_A] gi|289440399|gb|EFD22892.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis KZN 605] gi|289540666|gb|EFD45244.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis K85] gi|289545488|gb|EFD49136.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis T17] gi|289687865|gb|EFD55353.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis 02_1987] gi|289692809|gb|EFD60238.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis T92] gi|289696218|gb|EFD63647.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis EAS054] gi|289711187|gb|EFD75203.1| hypothetical integral membrane protein yrbE4A [Mycobacterium tuberculosis GM 1503] gi|289715224|gb|EFD79236.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|298496775|gb|EFI32069.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308213831|gb|EFO73230.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu001] gi|308324772|gb|EFP13623.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu002] gi|308329036|gb|EFP17887.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu003] gi|308332875|gb|EFP21726.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu004] gi|308336458|gb|EFP25309.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu005] gi|308340336|gb|EFP29187.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu006] gi|308344191|gb|EFP33042.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu007] gi|308348121|gb|EFP36972.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu008] gi|308352885|gb|EFP41736.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu009] gi|308356698|gb|EFP45549.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu010] gi|308360652|gb|EFP49503.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu011] gi|308364269|gb|EFP53120.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu012] gi|323717843|gb|EGB27034.1| hypothetical protein TMMG_03675 [Mycobacterium tuberculosis CDC1551A] gi|326905343|gb|EGE52276.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis W-148] gi|328460274|gb|AEB05697.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis KZN 4207] gi|328864220|gb|AEB53193.1| conserved integral membrane protein YRBE4A [Mycobacterium tuberculosis] Length = 254 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 26/203 (12%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L++F ++ + GA LS G +I ++G ++T +++AG +A Sbjct: 56 IPFTVLVAFTLNILLREIGAADLSGAGTAFGTIT--------QLGPVVTVLVVAGAGATA 107 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ I EEIDA+R +G+D ++ L+ PR+ A L+ +L N G I Sbjct: 108 ICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLAST----LVALLLN-----GLVCAIG 158 Query: 288 KYYDIPFAVFFSRFHSTATL--ANIFTGL-------IKAPFMACAIGIVAMKEGFAVGVH 338 F+VF + A + + TGL IKA G+V G V Sbjct: 159 LSGGYAFSVFLQGVNPGAFINGLTVLTGLRELILAEIKALLFGVMAGLVGCYRGLTVKGG 218 Query: 339 SNSLGKKVTTCVVQSISIVIIID 361 +G V VV + + +I+ Sbjct: 219 PKGVGNAVNETVVYAFICLFVIN 241 >gi|311744212|ref|ZP_07718016.1| ABC superfamily ATP binding cassette transporter, membrane protein [Aeromicrobium marinum DSM 15272] gi|311312385|gb|EFQ82298.1| ABC superfamily ATP binding cassette transporter, membrane protein [Aeromicrobium marinum DSM 15272] Length = 279 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 20/204 (9%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V+ ++F G + G LS+ G F+ + + RE+ L+ A+ +A G Sbjct: 68 VGVIAFLAFFAGTGVGLNGYAALSEIGVAKFTAFISAYFNTREVAPLVAAIALAATVGCG 127 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPR-IWALIISLPLLTI--LANFSA------ 278 A +G+M+I+EEIDA+ MG+ + L++ R I A I +PL ++ +A++ A Sbjct: 128 YTARLGAMRISEEIDALEVMGVPSLPFLVTTRMIAAFIAVIPLYSVALVASYLAPRLITT 187 Query: 279 -IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 I G S + +Y I F +I K +A I ++ G+ Sbjct: 188 LIYGESAGTYDHYFIQF----------LPPGDILWSFFKLAVLAVGIILIHCYYGYTASD 237 Query: 338 HSNSLGKKVTTCVVQSISIVIIID 361 +G+ V + SI V++ D Sbjct: 238 GPAGVGRAVGRAIRTSIVFVVVTD 261 >gi|300782533|ref|YP_003762824.1| ABC transporter permease [Amycolatopsis mediterranei U32] gi|41581797|gb|AAS07741.1| putative ABC-transporter integral membrane protein [Amycolatopsis mediterranei S699] gi|299792047|gb|ADJ42422.1| ABC transport system permease protein [Amycolatopsis mediterranei U32] Length = 250 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 56/222 (25%), Positives = 109/222 (49%), Gaps = 6/222 (2%) Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 L I+Q +++ + L++ GAVI+ Q Q GA+ ++ + +++ Sbjct: 26 LREFIQQSWFIASVTILPTALVAIPFGAVISLQFGSLARQLGAQSYTGAGSVLATVQQAS 85 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 L+TA+++AG GSA+ A+IG+ I EEI A+ +G+ V+ LI PR A+++ LL Sbjct: 86 PLVTALLVAGAGGSAVCADIGARTIREEIAAMEVLGVSAVQRLIVPRTLAMMLVALLLNG 145 Query: 273 LANFSAIIGA---SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329 + + ++G ++V+ P A + + F + A L +++ G +KA +VA Sbjct: 146 MVSVIGVLGGYFFNVVLQG--GTPGA-YLASFSALAQLPDLWVGELKALIFGFIAAVVAS 202 Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 G +G V VV + ++ +++ + + Y I Sbjct: 203 YRGLNPSGGPKGVGDAVNQSVVITFLLLFVVNFVITLIYLQI 244 >gi|54022503|ref|YP_116745.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54014011|dbj|BAD55381.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 283 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 44/138 (31%), Positives = 76/138 (55%), Gaps = 10/138 (7%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V+++ F+T G IA QG L G E + + L +R +++ + +A G+ Sbjct: 72 VVIVGFLTLFSGGTIAVQGYSSLGNIGVEALTGFFSAFLNVRIAAPVISGIGLAATIGAG 131 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PL--LTILANFSAIIGASI 284 A++G+M+++EEIDA+ TM + V LI R+ A +I++ PL L ++A+F A A++ Sbjct: 132 STAQLGAMRVSEEIDALETMAIRPVPYLIGTRVLAGMIAIVPLYALAVIASFFAARFATV 191 Query: 285 VIW----KYYDIPFAVFF 298 VI+ YD F+ F Sbjct: 192 VIYGQSAGVYDHYFSTFL 209 >gi|226305213|ref|YP_002765171.1| YrbE family protein [Rhodococcus erythropolis PR4] gi|229490562|ref|ZP_04384400.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] gi|226184328|dbj|BAH32432.1| putative YrbE family protein [Rhodococcus erythropolis PR4] gi|229322382|gb|EEN88165.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] Length = 286 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/116 (28%), Positives = 66/116 (56%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V+ ++S TG V+ QG L Q G+ + + L + + REI ++ A+ ++ G Sbjct: 77 VIAMMSGFTGVVVGLQGFAALEQLGSSVLTGFLSAYVNTREIAPIVAALALSATVGCGFT 136 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 A++G+M+I+EEIDA+ M + V L++ R+ A +++ L I+ +A + + ++ Sbjct: 137 AQLGAMRISEEIDALEVMAVPSVPFLVTTRMIAGFVAVIPLYIVGLLAAYLASRVI 192 >gi|226361226|ref|YP_002779004.1| YrbE family protein [Rhodococcus opacus B4] gi|226239711|dbj|BAH50059.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 291 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 48/162 (29%), Positives = 85/162 (52%), Gaps = 11/162 (6%) Query: 168 VPVVILISFVTGAVIAQQG--AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 V ++ + GAV+A Q AF L FGA I S +R I ++T + A ++G Sbjct: 80 VSLMFFLGLAVGAVVAIQAFMAFDLLGFGALTGIIG--SFGNVRVIAPIITGIGFAAQAG 137 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR-IWALIISLP--LLTILANFSAIIGA 282 + AEIGSM+I+EEIDA +MGL + ++ R I +++I +P L+ ++ +F Sbjct: 138 CRMTAEIGSMRISEEIDATESMGLQAIPFVVGTRLIGSMLIVIPGYLMALVVSFFT---G 194 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI 324 ++I ++ P + F ++ ++ L+KA + CA+ Sbjct: 195 GLIIKTFHRQPSGTYDHYFSQFLSVPDLMASLLKA-VVFCAV 235 >gi|226361064|ref|YP_002778842.1| YrbE family protein [Rhodococcus opacus B4] gi|226239549|dbj|BAH49897.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 286 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/116 (28%), Positives = 66/116 (56%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V+ ++S TG V+ QG L Q G+ + + L + + REI ++ A+ ++ G Sbjct: 77 VIAMMSGFTGVVVGLQGFAALEQLGSSVLTGFLSAYVNTREIAPIVAALALSATVGCGFT 136 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 A++G+M+I+EEIDA+ M + V L++ R+ A +++ L I+ +A + + ++ Sbjct: 137 AQLGAMRISEEIDALEVMAVPSVPFLVTTRMIAGFVAVIPLYIVGLLAAYLASRVI 192 >gi|183984957|ref|YP_001853248.1| membrane protein YrbE4A [Mycobacterium marinum M] gi|183178283|gb|ACC43393.1| conserved membrane protein YrbE4A [Mycobacterium marinum M] Length = 237 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 26/203 (12%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L++F ++ + GA LS G +I ++G ++T +++AG +A Sbjct: 39 IPFTVLVAFTLNILLREIGAADLSGAGTAFGTIT--------QLGPVVTVLVVAGAGATA 90 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ I EEIDA+R +G+D ++ L+ PR+ A S + +L IG S Sbjct: 91 ICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLA---STVVALLLNGLVCAIGLS---G 144 Query: 288 KYYDIPFAVFFSRFHSTATL--ANIFTGL-------IKAPFMACAIGIVAMKEGFAVGVH 338 Y F+VF + A + + TGL IKA G+V G V Sbjct: 145 GYA---FSVFLQGVNPGAFINGLTVLTGLRELILAEIKALLFGVMAGLVGCYRGLTVKGG 201 Query: 339 SNSLGKKVTTCVVQSISIVIIID 361 +G V VV + + +I+ Sbjct: 202 PKGVGNAVNETVVYAFICLFVIN 224 >gi|54024946|ref|YP_119188.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54016454|dbj|BAD57824.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 295 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 59/105 (56%) Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 VG PV++++ V GA+I G L G + + ++ RE+ L+ AV A Sbjct: 79 VGGGVAPVLVVMGVVAGAMIGLVGITALDTLGMGPLAGAMSALANPRELAPLIAAVGFAA 138 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267 ++G + AEIG+M+I EEIDA+ +D + ++S R+ A ++++ Sbjct: 139 QAGCRMTAEIGAMRIAEEIDALEAQAIDPIPYVVSTRLLAAVLTV 183 >gi|41406660|ref|NP_959496.1| hypothetical protein MAP0562 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118465663|ref|YP_879935.1| hypothetical protein MAV_0655 [Mycobacterium avium 104] gi|254773611|ref|ZP_05215127.1| hypothetical protein MaviaA2_02900 [Mycobacterium avium subsp. avium ATCC 25291] gi|41395009|gb|AAS02879.1| hypothetical protein MAP_0562 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118166950|gb|ABK67847.1| conserved hypothetical protein [Mycobacterium avium 104] Length = 254 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 26/203 (12%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L++F ++ + GA LS G +I ++G ++T +++AG +A Sbjct: 56 IPFTVLVAFTLNILLREIGAADLSGAGTAFGTIT--------QLGPVVTVLVVAGAGATA 107 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ I EEIDA+R +G+D + L+ PR+ A + LL L + G + Sbjct: 108 ICADLGARTIREEIDAMRVLGIDPIHRLVVPRVLASTVVALLLNGLVCAIGLSGGYV--- 164 Query: 288 KYYDIPFAVFFSRFHSTATLAN--IFTGL-------IKAPFMACAIGIVAMKEGFAVGVH 338 F+VF + A + + TGL +KA G+V G V Sbjct: 165 ------FSVFLQGVNPGAFINGLTVLTGLRELVLAEVKALLFGVMAGMVGCYRGLTVKGG 218 Query: 339 SNSLGKKVTTCVVQSISIVIIID 361 +G V VV + + +I+ Sbjct: 219 PKGVGNAVNETVVYAFICLFVIN 241 >gi|226304447|ref|YP_002764405.1| YrbE family protein [Rhodococcus erythropolis PR4] gi|229494370|ref|ZP_04388133.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|226183562|dbj|BAH31666.1| putative YrbE family protein [Rhodococcus erythropolis PR4] gi|229318732|gb|EEN84590.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length = 254 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 8/184 (4%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L+SF ++ + GA LS GA + ++ ++G ++T +++AG +A Sbjct: 56 IPFTVLVSFTINILLREIGAADLSGAGAALGTVT--------QVGPIVTVLIVAGAGATA 107 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++ + I EEIDA++ +G++ + L+ PR+ A LL L I+G + Sbjct: 108 ICADLSARTIREEIDAMKVLGINPIHRLVVPRVLASTGVALLLNGLVCTIGILGGFVFSV 167 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 D+ F + + ++KA G+VA G V + S+G V Sbjct: 168 FIQDVNPGAFVNGITLLTGFGELMLSMVKAGLFGMIAGLVAAYLGLNVKGGAKSVGDAVN 227 Query: 348 TCVV 351 VV Sbjct: 228 QTVV 231 >gi|108797096|ref|YP_637293.1| hypothetical protein Mmcs_0116 [Mycobacterium sp. MCS] gi|119866181|ref|YP_936133.1| hypothetical protein Mkms_0125 [Mycobacterium sp. KMS] gi|126432719|ref|YP_001068410.1| hypothetical protein Mjls_0106 [Mycobacterium sp. JLS] gi|108767515|gb|ABG06237.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119692270|gb|ABL89343.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] gi|126232519|gb|ABN95919.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 265 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 72/128 (56%), Gaps = 12/128 (9%) Query: 139 TGEFCASSYKFKGFLLS---LIRQMYYVGVS-GVPVVILISFVTGAVIAQQGAFQLSQFG 194 TG+ ++++ F+L L R + V+ VP+ +LI F ++A+ GA +S G Sbjct: 33 TGKALFRPFQWREFILQAWFLFRVSFLPTVAVSVPLTVLIIFTLNILLAEFGAADVSGAG 92 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 A + ++ ++G L+T +++AG +AI A++G+ I EEIDA+ +G+D + Sbjct: 93 AALGAVT--------QLGPLVTVLVVAGAGSTAICADLGARTIREEIDALEVLGIDPIHR 144 Query: 255 LISPRIWA 262 L+ PR+ A Sbjct: 145 LVVPRVVA 152 >gi|254818326|ref|ZP_05223327.1| hypothetical protein MintA_00280 [Mycobacterium intracellulare ATCC 13950] Length = 255 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 9/195 (4%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L+SF ++ + GA LS GA ++ +IG ++T +++AG +A Sbjct: 56 IPFTVLVSFTLNILLRELGAADLSGAGAAFGAVT--------QIGPMVTVLIVAGAGSTA 107 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + A++GS I EEIDA+ +G++ V+ L++PR+ A + LL L I+G Sbjct: 108 MCADLGSRTIREEIDAMEVLGINPVQRLVTPRMLAAGLVALLLNSLVVIIGIVGGYAFSV 167 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-GVHSNSLGKKV 346 D+ F + + + +KA G+VA G + G + ++G V Sbjct: 168 FIQDVNPGAFAAGITLLTGVPEVIISCVKAALFGLIAGLVACYRGLTITGGGAKAVGNAV 227 Query: 347 TTCVVQSISIVIIID 361 VV + +++++ Sbjct: 228 NETVVYAFMSLMVVN 242 >gi|108797253|ref|YP_637450.1| hypothetical protein Mmcs_0273 [Mycobacterium sp. MCS] gi|119866338|ref|YP_936290.1| hypothetical protein Mkms_0283 [Mycobacterium sp. KMS] gi|126432877|ref|YP_001068568.1| hypothetical protein Mjls_0264 [Mycobacterium sp. JLS] gi|108767672|gb|ABG06394.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119692427|gb|ABL89500.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] gi|126232677|gb|ABN96077.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 256 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 9/195 (4%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L+SF ++ + GA LS GA ++ ++G L+T +++AG +A Sbjct: 57 IPFTVLVSFTLNILLRELGAADLSGAGAAFGAVT--------QVGPLVTVLIVAGAGATA 108 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + A++GS I EEI+A+ +G++ V L++PR+ A + LL L I+G Sbjct: 109 MCADLGSRTIREEIEAMEVLGINPVARLVTPRMLASGLVALLLNSLVVIIGIVGGYAFSV 168 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV-HSNSLGKKV 346 D+ F + + + +KA G+VA G ++ + ++G V Sbjct: 169 FVQDVNPGAFAAGITLLTGIGEVIISCVKAALFGLIAGLVACYRGLSINRGGAKAVGNAV 228 Query: 347 TTCVVQSISIVIIID 361 VV + + +I+ Sbjct: 229 NETVVYAFMALFVIN 243 >gi|315442585|ref|YP_004075464.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|315260888|gb|ADT97629.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 237 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 8/194 (4%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L++F ++ + GA LS G +I ++G ++T +++AG +A Sbjct: 39 IPFTVLVAFTLNILLREIGAADLSGAGTAFGTIT--------QLGPVVTVLVVAGAGATA 90 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ I EEIDA+R +G+D ++ L+ PR+ A LL L + G + Sbjct: 91 ICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLASTFVALLLNGLVCLIGLSGGYVFSV 150 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + F + L + IKA G+V G V +G V Sbjct: 151 FLQGVNPGSFINGLTVLTGLPELILAEIKALLFGFVAGLVGCYRGLTVKGGPKGVGNAVN 210 Query: 348 TCVVQSISIVIIID 361 VV + + +I+ Sbjct: 211 ETVVYAFICLFVIN 224 >gi|302523372|ref|ZP_07275714.1| ABC-transporter integral membrane protein [Streptomyces sp. SPB78] gi|318059764|ref|ZP_07978487.1| ABC-transporter integral membrane protein [Streptomyces sp. SA3_actG] gi|318075808|ref|ZP_07983140.1| ABC-transporter integral membrane protein [Streptomyces sp. SA3_actF] gi|302432267|gb|EFL04083.1| ABC-transporter integral membrane protein [Streptomyces sp. SPB78] Length = 268 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 65/118 (55%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V+I ++ TG V+ QG + Q G + + + RE+ L+ + ++ G+ Sbjct: 57 VGVMIGMTAATGTVVGLQGFAAMDQIGTAPLTGFVTAYFNTREVAPLVAGLALSATVGAG 116 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 A++G+M+INEE+DA+ MG+ + L++ RI A ++++ L L S+ + + +V Sbjct: 117 FTAQLGAMRINEEVDALEGMGIRAMPYLVTTRIIAGVVAIIPLYALGLLSSYVASRVV 174 >gi|323436128|ref|ZP_01050723.2| ABC transporter, permease protein [Dokdonia donghaensis MED134] gi|321496443|gb|EAQ38641.2| ABC transporter, permease protein [Dokdonia donghaensis MED134] Length = 233 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 8/117 (6%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ----LREIGVLLTAVMIAGRSG 225 +V ISF G V+A Q A L+ + L+ + E ++++AG+ G Sbjct: 33 IVAFISFFVGGVVAIQTALNLNN---PLIPKSLIGFAARQSVILEFAPTFISIIMAGKVG 89 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 S I + IG+M++ E+IDA+ MG++ + LI P+I A+++ P + +A F IIGA Sbjct: 90 SFITSSIGTMRVTEQIDALEVMGINSLNYLIFPKIVAMLV-YPFVIAIAMFLGIIGA 145 >gi|315022937|gb|EFT35960.1| ABC-type transport system involved in resistance to organic solvents, permease component [Riemerella anatipestifer RA-YM] gi|325336426|gb|ADZ12700.1| ABC-type transport system involved in resistance to organic solvents, permease component [Riemerella anatipestifer RA-GD] Length = 253 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 9/137 (6%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G+ K F L+R++ +GV+ +V+ S GAV+A Q + F A Sbjct: 20 GKVIKRPQKHNIFFKLLMREINDLGVNSFGLVLFTSIFVGAVVAIQ---MYNNFKASTIP 76 Query: 200 IDL------MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 I L ++ + E + ++++AG+ GS I + IG+M++ E+IDA+ MG++ Sbjct: 77 IPLYFIGYATKVVLILEFSPTIISLILAGKVGSYIASSIGTMRVTEQIDALDIMGVNSPN 136 Query: 254 ILISPRIWALIISLPLL 270 LI P+I A +I PLL Sbjct: 137 FLILPKIVANVIFNPLL 153 >gi|313206130|ref|YP_004045307.1| hypothetical protein Riean_0637 [Riemerella anatipestifer DSM 15868] gi|312445446|gb|ADQ81801.1| protein of unknown function DUF140 [Riemerella anatipestifer DSM 15868] Length = 253 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 9/137 (6%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G+ K F L+R++ +GV+ +V+ S GAV+A Q + F A Sbjct: 20 GKVIKRPQKHNIFFKLLMREINDLGVNSFGLVLFTSIFVGAVVAIQ---MYNNFKASTIP 76 Query: 200 IDL------MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 I L ++ + E + ++++AG+ GS I + IG+M++ E+IDA+ MG++ Sbjct: 77 IPLYFIGYATKVVLILEFSPTIISLILAGKVGSYIASSIGTMRVTEQIDALDIMGVNSPN 136 Query: 254 ILISPRIWALIISLPLL 270 LI P+I A +I PLL Sbjct: 137 FLILPKIVANVIFNPLL 153 >gi|254820120|ref|ZP_05225121.1| hypothetical protein MintA_09346 [Mycobacterium intracellulare ATCC 13950] Length = 286 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 2/202 (0%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V +V ++ G+++ QG LS G E + + + + R + L + ++ G+ Sbjct: 74 VGIVGFLTLSGGSLVTIQGYSSLSGIGVEALTGFVSAYVNGRIVTPLTAVIGLSATIGAG 133 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 A++G+M+INEEIDA+ MG+ + L+S R+ A ++ + L + + + A Sbjct: 134 TTAQLGAMRINEEIDALEVMGIRSIAYLVSTRVIAGVVVVIPLYCIGLWMSFYAARFATT 193 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 Y P V+ F + +I L++A M + +V G+ +G+ V Sbjct: 194 SVYGQPTGVYDHYFSTFLQPTDIIWSLLQAVLMGLVVMLVHTYYGYTASGGPAGVGEAVG 253 Query: 348 TCVVQSI--SIVIIIDSLFAIF 367 V S+ ++++I+ S AI+ Sbjct: 254 RAVRSSMVSAVLVILFSSLAIY 275 >gi|149370868|ref|ZP_01890463.1| hypothetical protein SCB49_04265 [unidentified eubacterium SCB49] gi|149355654|gb|EDM44212.1| hypothetical protein SCB49_04265 [unidentified eubacterium SCB49] Length = 245 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 64/119 (53%), Gaps = 8/119 (6%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ----LREIGVLLTAVMIAGRSG 225 +V ISF G VI Q A L+ + L++ + E ++++AG+ G Sbjct: 45 IVAFISFFVGGVITIQTALNLTN---PLIPKSLIAYATRQSIILEFAPTFMSIIMAGKVG 101 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 S I + IGSM++ E+IDA+ MG++ + L+ P+I A++ PL+ LA F I+G I Sbjct: 102 SFITSSIGSMRVTEQIDALEVMGINSLNYLVFPKIVAMMF-YPLVIALAMFLGIVGGYI 159 >gi|118619947|ref|YP_908279.1| integral membrane protein YrbE6A [Mycobacterium ulcerans Agy99] gi|118572057|gb|ABL06808.1| conserved hypothetical integral membrane protein YrbE6A [Mycobacterium ulcerans Agy99] Length = 281 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 52/213 (24%), Positives = 104/213 (48%), Gaps = 2/213 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 IRQ ++ + + IL++ GA ++ Q A Q GA + + +R+ L+ Sbjct: 61 IRQASFMAATAIMPTILVALPIGATLSIQFAMLAGQVGATSLAGAASGLTVVRQAASLVA 120 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW-ALIISLPLLTILAN 275 A+++A GSAI A++G + EE DA+ MG+ VR L+ PR+ A++I + L ++ Sbjct: 121 AILLAAAVGSAITADLGVRTMREETDAMEMMGVSVVRNLVVPRLLAAMVIGVALCGVVC- 179 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 F + + + F + F + AT ++ L+KA + +VA ++G + Sbjct: 180 FVGFLASYLFNVYVQGGSAGSFLATFSAFATTGDMILALLKAAVYGFIVTVVACQKGLST 239 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + V VV+++ +++I++ + + Y Sbjct: 240 RGGPAGVANSVNAAVVEAVLLLMIVNVVVSELY 272 >gi|183980209|ref|YP_001848500.1| integral membrane protein YrbE6A [Mycobacterium marinum M] gi|183173535|gb|ACC38645.1| conserved hypothetical integral membrane protein YrbE6A [Mycobacterium marinum M] Length = 281 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 52/213 (24%), Positives = 104/213 (48%), Gaps = 2/213 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 IRQ ++ + + IL++ GA ++ Q A Q GA + + +R+ L+ Sbjct: 61 IRQASFMAATAIMPTILVALPIGATLSIQFAMLAGQVGATSLAGAASGLTVVRQAASLVA 120 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW-ALIISLPLLTILAN 275 A+++A GSAI A++G + EE DA+ MG+ VR L+ PR+ A++I + L ++ Sbjct: 121 AILLAAAVGSAITADLGVRTMREETDAMEVMGVSVVRNLVVPRLLAAMVIGVALCGVVC- 179 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 F + + + F + F + AT ++ L+KA + +VA ++G + Sbjct: 180 FVGFLASYLFNVYVQGGSAGSFLATFSAFATTGDMILALLKAAVYGFIVTVVACQKGLST 239 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + V VV+++ +++I++ + + Y Sbjct: 240 RGGPAGVANSVNAAVVEAVLLLMIVNVVVSELY 272 >gi|118471402|ref|YP_884549.1| ABC transporter transmembrane protein [Mycobacterium smegmatis str. MC2 155] gi|118172689|gb|ABK73585.1| ABC-transporter integral membrane protein [Mycobacterium smegmatis str. MC2 155] Length = 289 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 56/194 (28%), Positives = 97/194 (50%), Gaps = 19/194 (9%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V +I FVT G++IA QG L G E F+ ++ +R + ++T +A G+ Sbjct: 78 VAIIGFVTLSAGSLIAIQGFASLGNIGVEAFTGFFAALANIRVVAPVVTGQALAATVGAG 137 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA---LIISLPLLTILANFSAIIGASI 284 AE+G+M+I+EE+DA+ MG+ + L+S RI A +II L + IL +F + A + Sbjct: 138 ATAELGAMRISEEVDALEVMGIKSISYLVSTRIMAGAIVIIPLYAMAILLSF---MSAQL 194 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMA-------CAIGIVAMKEGFAVGV 337 V +Y + FH+ + ++ ++ M+ C G A G AVGV Sbjct: 195 VTTIFYSQSVGTYEHYFHTFLRVDDVMWSFLEVIIMSVIVMLNHCYFGYFA--SGGAVGV 252 Query: 338 HSNSLGKKVTTCVV 351 ++G+ + T ++ Sbjct: 253 -GEAVGRSMRTSLI 265 >gi|118465348|ref|YP_881277.1| TrnB2 protein [Mycobacterium avium 104] gi|118166635|gb|ABK67532.1| TrnB2 protein [Mycobacterium avium 104] Length = 282 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 49/149 (32%), Positives = 78/149 (52%), Gaps = 7/149 (4%) Query: 148 KFKGFLLSLIRQMYY----VGVSG--VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSID 201 ++ G LL LI +M + V G V ++ ++ TGA++A QG LS G E + Sbjct: 45 RYPGELLRLIAEMGMGTGALAVIGGTVGIIGFLTLTTGALVAVQGYDTLSNIGVEALTGF 104 Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261 L + L +R I + +A G+ A++G+M+INEEIDA+ MG+ V L S RI Sbjct: 105 LSAFLNVRMIAPCTAGLALAATIGAGATAQLGAMRINEEIDALEVMGIRAVTYLASTRII 164 Query: 262 A-LIISLPLLTILANFSAIIGASIVIWKY 289 A +++ +PL + S I + I+ Y Sbjct: 165 AGILVVIPLYAVAVLMSFIAAKLLTIYVY 193 >gi|254774785|ref|ZP_05216301.1| TrnB2 protein [Mycobacterium avium subsp. avium ATCC 25291] Length = 282 Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 49/149 (32%), Positives = 78/149 (52%), Gaps = 7/149 (4%) Query: 148 KFKGFLLSLIRQMYY----VGVSG--VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSID 201 ++ G LL LI +M + V G V ++ ++ TGA++A QG LS G E + Sbjct: 45 RYPGELLRLIAEMGMGTGALAVIGGTVGIIGFLTLTTGALVAVQGYDTLSNIGVEALTGF 104 Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261 L + L +R I + +A G+ A++G+M+INEEIDA+ MG+ V L S RI Sbjct: 105 LSAFLNVRMIAPCTAGLALAATIGAGATAQLGAMRINEEIDALEVMGIRAVTYLASTRII 164 Query: 262 A-LIISLPLLTILANFSAIIGASIVIWKY 289 A +++ +PL + S I + I+ Y Sbjct: 165 AGILVVIPLYAVAVLMSFIAAKLLTIYVY 193 >gi|126436761|ref|YP_001072452.1| hypothetical protein Mjls_4189 [Mycobacterium sp. JLS] gi|126236561|gb|ABN99961.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 285 Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 50/202 (24%), Positives = 95/202 (47%), Gaps = 2/202 (0%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V +V ++ G+++ QG LS G E + + + + R + L + ++ G+ Sbjct: 73 VGIVGFLTLTAGSLVTIQGYSSLSDIGVEALTGFVSAYVNGRIVTPLTAVISLSATIGAG 132 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 A++G+M+INEEIDA+ MG+ V L S R+ A +I + L +A + + + A Sbjct: 133 TTAQLGAMRINEEIDALEVMGIRSVAYLASTRVIAGVIVVIPLYCIAVWMSFMSARFATT 192 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 YY ++ F + ++I L +A M + +V GF +G+ V Sbjct: 193 VYYGQATGIYDHYFSTFLQPSDILWSLFQAVLMGFVVMLVHTYYGFTASGGPAGVGEAVG 252 Query: 348 TCVVQSI--SIVIIIDSLFAIF 367 V S+ ++ +I+ + AI+ Sbjct: 253 RAVRTSLIAAVFVILFASLAIY 274 >gi|41406856|ref|NP_959692.1| hypothetical protein MAP0758 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395206|gb|AAS03075.1| hypothetical protein MAP_0758 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 281 Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 63/106 (59%), Gaps = 4/106 (3%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V+++ F+T G +A QG L G E + L + + +R + ++ + +A G+ Sbjct: 70 VVIVGFLTLAAGGTLAIQGYTSLGNIGIEALTGFLAAFINVRIVAPVVAGIGLAATFGAG 129 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTI 272 + A++G+M+INEE+DA+ +M + V L+S RI A ++++ PL +I Sbjct: 130 VTAQLGAMRINEEVDALESMAIRPVAYLVSTRILAGMLAITPLYSI 175 >gi|300784334|ref|YP_003764625.1| ABC transporter permease [Amycolatopsis mediterranei U32] gi|299793848|gb|ADJ44223.1| ABC transport system permease protein [Amycolatopsis mediterranei U32] Length = 283 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 7/136 (5%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V+I ++ TG ++ QG L+Q G + + + RE+ L + ++ G Sbjct: 74 VMIGMTLFTGLIVGLQGYSALNQLGTAALTGFISAYFNTREVAPLSAGLALSATVGCGFT 133 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTILANFSAIIGASIVIWK 288 A++G+M+I+EEIDA+ MG+ + L++ R+ A + + +PL + S + I IW Sbjct: 134 AQLGAMRISEEIDALEVMGVPSMPYLVTTRVLAGVAAVIPLYAVGLLSSYLASRQITIWL 193 Query: 289 Y------YDIPFAVFF 298 Y YD F +F Sbjct: 194 YGQSAGTYDHYFTLFL 209 >gi|108801582|ref|YP_641779.1| hypothetical protein Mmcs_4619 [Mycobacterium sp. MCS] gi|119870736|ref|YP_940688.1| hypothetical protein Mkms_4707 [Mycobacterium sp. KMS] gi|108772001|gb|ABG10723.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119696825|gb|ABL93898.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] Length = 254 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 26/203 (12%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L++F ++ + GA LS G +I ++G ++T +++AG +A Sbjct: 56 IPFTVLVAFTLNILLREIGAADLSGAGTAFGTIT--------QLGPVVTVLVVAGAGATA 107 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ I EEIDA+R +G+D ++ L+ PR+ A LL L + G + Sbjct: 108 ICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGLAGGYV--- 164 Query: 288 KYYDIPFAVFFSRFHSTATL--ANIFTGL-------IKAPFMACAIGIVAMKEGFAVGVH 338 F+VF + A + + TGL IKA G+V G V Sbjct: 165 ------FSVFLQGVNPGAFINGLTVLTGLGELVLAEIKALLFGVVAGLVGCYRGLTVQGG 218 Query: 339 SNSLGKKVTTCVVQSISIVIIID 361 +G V VV + + +I+ Sbjct: 219 PKGVGIAVNETVVYAFICLFVIN 241 >gi|126437566|ref|YP_001073257.1| hypothetical protein Mjls_5002 [Mycobacterium sp. JLS] gi|126237366|gb|ABO00767.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 254 Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 56/95 (58%), Gaps = 8/95 (8%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L++F ++ + GA LS G +I ++G ++T +++AG +A Sbjct: 56 IPFTVLVAFTLNILLREIGAADLSGAGTAFGTIT--------QLGPVVTVLVVAGAGATA 107 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 I A++G+ I EEIDA+R +G+D ++ L+ PR+ A Sbjct: 108 ICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLA 142 >gi|54027606|ref|YP_121848.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54019114|dbj|BAD60484.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 287 Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 10/180 (5%) Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G + QG L+ G + + + RE+G LL ++ A ++G A++G+M+I+ Sbjct: 87 GMTVGIQGHTSLNLLGLSPITGAISAFATTRELGPLLASLAFAAQAGCRFTAQLGAMRIS 146 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ ++ + + L+S R++A I+++ L L A I ++ + D + Sbjct: 147 EEIDALESVAIRPLPYLVSTRMFAAIVAIVPLYCLGLAVAYISCALTVQLVGDTAEGTYQ 206 Query: 299 SRFHSTATLANIFTGLIKA-------PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 F+ ++ L+KA F+ C G A VGV + G+ + C++ Sbjct: 207 HYFYQFLIPTDVLYSLLKAILFVAITTFIQCYYGFFASGGPEGVGVAA---GRAIKMCII 263 >gi|111023083|ref|YP_706055.1| ABC transporter membrane protein [Rhodococcus jostii RHA1] gi|110822613|gb|ABG97897.1| possible ABC transporter integral membrane protein [Rhodococcus jostii RHA1] Length = 269 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 58/98 (59%), Gaps = 8/98 (8%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P+ +LI+ G++ Q GAE ++ ++ + + + L+ A+M+AG GSA Sbjct: 67 IPIGVLIAVTIGSLA--------GQLGAEGYTGAVVGFVIVGQASALVCALMLAGVGGSA 118 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 I A++GS I EE++A+ +GL+ + L+ PR+ A +I Sbjct: 119 ICADLGSRTIREEVEAMEVLGLNVIERLVVPRVLAAVI 156 >gi|225712538|gb|ACO12115.1| UPF0393 membrane protein RBE_1340 [Lepeophtheirus salmonis] Length = 215 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 79/155 (50%), Gaps = 11/155 (7%) Query: 135 VISNTGEFCASSY-------KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +I + G++ Y K K + +I +MY +G+ +P V +S GA++ Q + Sbjct: 3 IIEHVGKYTTLVYQALQPAEKKKVYYQQIIYEMYELGIKSIPFVAFVSIFVGAILTLQTS 62 Query: 188 FQLSQFGAEIFSIDLMSILQLR-EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 + + + + + E + ++++AG+ GS I + IG+M++ E+IDA+ Sbjct: 63 ANIKNPLIPKYLVGFATRESIMVEFSPTIISLLLAGKIGSNIASGIGTMRVTEQIDALEI 122 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281 MG++ LI P+I AL++ P + + S IIG Sbjct: 123 MGVNSAGYLIYPKIVALMLINPFII---SLSIIIG 154 >gi|126436743|ref|YP_001072434.1| hypothetical protein Mjls_4171 [Mycobacterium sp. JLS] gi|126236543|gb|ABN99943.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 284 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 62/229 (27%), Positives = 118/229 (51%), Gaps = 22/229 (9%) Query: 149 FKGFLLSLIRQMYYVGVSGVPVV----ILISFVT---GAVIAQQGAFQLSQFGAEIFSID 201 ++ ++ LI QM +GV + V+ +++ F+T G++IA Q QL Q G E + Sbjct: 48 YRTEVVRLIAQMS-LGVGALAVIGGTIVIVGFLTLSAGSLIAVQAYSQLQQVGVEALAGF 106 Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261 + L +R + L+ + +A G+ A++G+M+I+EE+DA+ MG+ V L S R+ Sbjct: 107 TSAFLNVRLVSPLVAGIGLAATIGAGATAQLGAMRISEEVDALEVMGIRSVAYLASSRVL 166 Query: 262 A-LIISLPL--LTILANFSAI-IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 A +I+ +PL + +LA F+A G ++V Y V+ F++ ++ ++A Sbjct: 167 AGVIVVIPLYCIAVLAAFAATRTGTTLV----YGQSTGVYDHYFYTFLNPTDLIYSFLQA 222 Query: 318 PFMACAIGIVAMKEGFA-----VGVHSNSLGKKVTTCVVQSISIVIIID 361 MA + +V GF GV ++G+ V T +V ++ + + + Sbjct: 223 ISMAVVVMLVHTYYGFTATGGPAGV-GEAVGRAVRTSLVAAVFVTLFVS 270 >gi|315635511|ref|ZP_07890777.1| ABC superfamily ATP binding cassette transporter, permease protein [Arcobacter butzleri JV22] gi|315480269|gb|EFU70936.1| ABC superfamily ATP binding cassette transporter, permease protein [Arcobacter butzleri JV22] Length = 91 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 30/83 (36%), Positives = 49/83 (59%) Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 D+ F F +R H+ L ++ G+ KA F AI I+ GF V ++ S+GK T V Sbjct: 9 DVTFIEFINRLHNEVPLKHLILGVFKALFFGFAIAIIGCYRGFQVQNNTTSIGKFTTMSV 68 Query: 351 VQSISIVIIIDSLFAIFYFAIGI 373 V +I +VI+ID++F++ + +GI Sbjct: 69 VNAIFVVILIDAVFSVIFTQMGI 91 >gi|300775379|ref|ZP_07085241.1| ABC superfamily ATP binding cassette transporter permease protein [Chryseobacterium gleum ATCC 35910] gi|300506119|gb|EFK37255.1| ABC superfamily ATP binding cassette transporter permease protein [Chryseobacterium gleum ATCC 35910] Length = 250 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 72/137 (52%), Gaps = 9/137 (6%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G+ K + F +R++ +GV+ +V+ S GAV+A Q + F A F Sbjct: 17 GKSLQKPQKMRVFWKLFMREINDLGVNSFGLVVFTSIFVGAVVAIQ---MFNNFDASSFP 73 Query: 200 IDLMSI------LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 I + + + E + ++++AG+ GS I + IG+M+++E+IDA+ MG++ Sbjct: 74 IPTSFVGYATKAVLVLEFSPTIISLILAGKVGSYIASSIGTMRVSEQIDALDIMGVNSPN 133 Query: 254 ILISPRIWALIISLPLL 270 LI P+I A ++ PLL Sbjct: 134 FLIFPKIVACVLFNPLL 150 >gi|118469944|ref|YP_887173.1| hypothetical protein MSMEG_2853 [Mycobacterium smegmatis str. MC2 155] gi|118171231|gb|ABK72127.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length = 270 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 27/204 (13%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L+SF ++ + GA LS GA ++ ++G ++T +++AG +A Sbjct: 71 IPFTVLVSFTLNILLRELGAADLSGAGAAFGAVT--------QVGPMVTVLIVAGAGATA 122 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + A++GS I +EIDA+ +G++ ++ L++PRI A + LL L I+G Sbjct: 123 MCADLGSRTIRDEIDAMEVLGINPIQRLVTPRILASGLVALLLNSLVVIIGILGG----- 177 Query: 288 KYYDIPFAVFFSRFHSTATLANI--FTGL-------IKAPFMACAIGIVAMKEGFAV-GV 337 Y F+VF + A A I TG+ IKA G+VA G + G Sbjct: 178 --YT--FSVFIQGVNPGAFAAGITLLTGVPEVIISCIKAMLFGFIAGMVACFRGLTIAGG 233 Query: 338 HSNSLGKKVTTCVVQSISIVIIID 361 + ++G V VV + + +++ Sbjct: 234 GAKAVGNAVNETVVYAFMALFVVN 257 >gi|254447411|ref|ZP_05060877.1| ABC transporter permease protein [gamma proteobacterium HTCC5015] gi|198262754|gb|EDY87033.1| ABC transporter permease protein [gamma proteobacterium HTCC5015] Length = 290 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 35/140 (25%), Positives = 73/140 (52%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 Q+Y+ G + ++ V GA++ Q + QL G ++ ++ +RE+ L+TA Sbjct: 70 QVYHTGFKALGTATPLAVVAGALVIFQASNQLYIVGGREHIGQIVIMIVVRELAPLVTAF 129 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++ RSG+A+ E+ +M+ N EI+++ +G+ ++ PRI A +I+ L +A Sbjct: 130 IVIARSGTAVATEVANMRANHEIESLEALGIHPYAYVVFPRIMAGMIATICLAFYFMVAA 189 Query: 279 IIGASIVIWKYYDIPFAVFF 298 + G V + ++ + +F Sbjct: 190 MYGGYFVTVPWSNLNVSTYF 209 >gi|296394454|ref|YP_003659338.1| hypothetical protein Srot_2051 [Segniliparus rotundus DSM 44985] gi|296181601|gb|ADG98507.1| protein of unknown function DUF140 [Segniliparus rotundus DSM 44985] Length = 280 Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 61/121 (50%) Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 ++G+ I EEIDA+R +G++ + L++PR+ A+++ PLL + F + I+ Y Sbjct: 134 DLGARTIREEIDAMRVIGINPTQRLVAPRLAAMLLVAPLLCLFIVFITMAAGYILAVMYQ 193 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 D+ + + A L++++ + KA F + ++A + G + + V V Sbjct: 194 DVTPGSYLGSLGAFAKLSDVYVAVGKALFFGVVVVVIACQRGLETKFGPRGVAESVNAAV 253 Query: 351 V 351 V Sbjct: 254 V 254 >gi|4580939|gb|AAD24544.1| YrbE1A [Mycobacterium leprae] Length = 112 Score = 56.2 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 8/115 (6%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P+ +L+ F ++AQ A LS GA I ++ ++G L T +++AG ++ Sbjct: 3 IPLTVLLIFTLNVLLAQFSAADLSGAGAAIGAVT--------QLGPLTTVLVVAGAGSTS 54 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 I A++G+ I EEIDA+ +G+D + L+ PR+ A + LL L ++G Sbjct: 55 ICADLGARTIREEIDAMEVLGIDPIHRLVVPRVLAATLVATLLNGLVITVGLVGG 109 >gi|229494350|ref|ZP_04388113.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] gi|229318712|gb|EEN84570.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] Length = 284 Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 1/88 (1%) Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q GA Q GA +S +++ L + + G L+ A++IAG GSAI A++G+ I EEIDA Sbjct: 91 QIGALA-DQIGAGAYSGAVVAFLIIGQAGPLVCALIIAGVGGSAICADLGARTIREEIDA 149 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLT 271 + +GL + L+ PR+ A+ + LL Sbjct: 150 LEVLGLPVLERLVVPRMIAIAVVCLLLN 177 >gi|168702230|ref|ZP_02734507.1| hypothetical protein GobsU_22062 [Gemmata obscuriglobus UQM 2246] Length = 256 Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 70/127 (55%), Gaps = 6/127 (4%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 +R Y V + G+P+ ++ G VI L++ G +++ + + + L Sbjct: 36 LRPFYSVTIGGLPLALVTGLALGVVIWMHTRDVLARTGTG--AVEYLPTFLAAAVLLELA 93 Query: 217 AV----MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 V ++A R+G+++ AE+ SM+++E+IDA+ +G+ +R L+ PRI A + + PLL + Sbjct: 94 PVGAGLIVAARTGASLGAELASMRVSEQIDAMELLGVSTIRALVGPRIVACVFAAPLLHV 153 Query: 273 LANFSAI 279 L +A+ Sbjct: 154 LIAATAL 160 >gi|150025444|ref|YP_001296270.1| ABC transporter permease [Flavobacterium psychrophilum JIP02/86] gi|149771985|emb|CAL43461.1| Probable ABC-type transport system, permease component [Flavobacterium psychrophilum JIP02/86] Length = 248 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 64/116 (55%), Gaps = 2/116 (1%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTAVMIAGRSGSAI 228 +V ISF G V+A Q A L+ + I + + E ++++AG+ GS I Sbjct: 48 IVAFISFFVGGVVAIQTALNLTNPLIPKYLIGFATRQSIILEFAPTFISIIMAGKMGSFI 107 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 + IG+M++ E+IDA+ MG++ + L+ P++ AL++ P L +A F I+G I Sbjct: 108 TSSIGTMRVTEQIDALEVMGVNSLNYLVFPKLIALLLY-PFLIGIAMFLGILGGYI 162 >gi|296163927|ref|ZP_06846563.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900708|gb|EFG80078.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 283 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 42/115 (36%), Positives = 68/115 (59%), Gaps = 7/115 (6%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V +I FVT G++IA QG L G E F+ ++ +R + ++T +A G+ Sbjct: 72 VAIIGFVTLSAGSLIAIQGFASLGNIGVEAFTGFFAALANVRVVAPIVTGTALAATVGAG 131 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPR-IWALIISLPLLTI---LANFSA 278 A++G+M+I+EEIDA+ MG+ V L+S R I A I+++PL ++ L+ FSA Sbjct: 132 ATAQLGAMRISEEIDALEVMGIKSVSYLVSTRVIGAFIVTIPLYSVAVLLSFFSA 186 >gi|254818327|ref|ZP_05223328.1| hypothetical protein MintA_00285 [Mycobacterium intracellulare ATCC 13950] Length = 261 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 60/104 (57%), Gaps = 1/104 (0%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +V ++ G V+A QG L G E + L + + +R ++ + +A G+ + Sbjct: 52 IVGFMTLAAGGVLAVQGYSSLGNIGIEALTGFLSAFINVRIAAPIVAGIGLAATFGAGVT 111 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTI 272 A++G+M+INEEIDA+ +M + V L+S RI A ++++ PL +I Sbjct: 112 AQLGAMRINEEIDALESMAIRPVSYLVSTRIVAGMLAVTPLYSI 155 >gi|54027082|ref|YP_121324.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54018590|dbj|BAD59960.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 288 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 14/199 (7%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V++ +S G V+ QG L G+ + + L + + REI L+ A+ ++ G Sbjct: 79 VIVFMSGSVGVVVGLQGFKALDAIGSSVLTGFLTAYINTREIAPLVAALALSATVGCGFT 138 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA-SIVIW- 287 A++G+M+I+EEIDA+ M + V L++ R+ A +++ L I+ A + SI IW Sbjct: 139 AQLGAMRISEEIDALEVMAVPGVPFLVTTRVIAGFLAVIPLYIVGLLGAYFASRSISIWF 198 Query: 288 -----KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 YD F++F ++ +K A I +V GF + Sbjct: 199 NGQSSGSYDHYFSLFLPP-------EDVLYSFLKVLVFAFVIILVHCYYGFTATGGPAGV 251 Query: 343 GKKVTTCVVQSISIVIIID 361 G V V +I +V ++D Sbjct: 252 GVAVGRAVRAAIVLVNVLD 270 >gi|311744833|ref|ZP_07718629.1| ABC superfamily ATP binding cassette transporter membrane protein [Aeromicrobium marinum DSM 15272] gi|311311950|gb|EFQ81871.1| ABC superfamily ATP binding cassette transporter membrane protein [Aeromicrobium marinum DSM 15272] Length = 292 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 33/123 (26%), Positives = 62/123 (50%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V+ + F TG + QG L Q G S + + REI ++ + +A G Sbjct: 81 VGVIAAMCFFTGTEVGLQGYAALDQLGTSALSGFVSAYFNTREIAPIVAGIALAATVGCG 140 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 A++G+M+I+EE+DA+ M + + L++ R+ A +I++ L I+ S+ + + Sbjct: 141 FTAQLGAMRISEEVDALEVMAIPSLPFLVTTRVIAGLIAVIPLYIVGLLSSYFATRLTVT 200 Query: 288 KYY 290 + Y Sbjct: 201 QVY 203 >gi|254773836|ref|ZP_05215352.1| TrnB2 protein [Mycobacterium avium subsp. avium ATCC 25291] Length = 281 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 62/106 (58%), Gaps = 4/106 (3%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V+++ F+T G +A QG L G E + L + + +R ++ + +A G+ Sbjct: 70 VVIVGFLTLAAGGTLAIQGYTSLGNIGIEALTGFLAAFINVRIAAPVVAGIGLAATFGAG 129 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTI 272 + A++G+M+INEE+DA+ +M + V L+S RI A ++++ PL +I Sbjct: 130 VTAQLGAMRINEEVDALESMAIRPVAYLVSTRILAGMLAITPLYSI 175 >gi|118466445|ref|YP_880208.1| TrnB2 protein [Mycobacterium avium 104] gi|118167732|gb|ABK68629.1| TrnB2 protein [Mycobacterium avium 104] Length = 281 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 62/106 (58%), Gaps = 4/106 (3%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V+++ F+T G +A QG L G E + L + + +R ++ + +A G+ Sbjct: 70 VVIVGFLTLAAGGTLAIQGYTSLGNIGIEALTGFLAAFINVRIAAPVVAGIGLAATFGAG 129 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTI 272 + A++G+M+INEE+DA+ +M + V L+S RI A ++++ PL +I Sbjct: 130 VTAQLGAMRINEEVDALESMAIRPVAYLVSTRILAGMLAITPLYSI 175 >gi|325674885|ref|ZP_08154572.1| ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] gi|325554471|gb|EGD24146.1| ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] Length = 280 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 47/169 (27%), Positives = 86/169 (50%), Gaps = 6/169 (3%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V +V ++ TG IA QG L G E + + + +R ++ + +A G+ Sbjct: 69 VVIVGFLTLFTGGTIAVQGFSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGLAATIGAG 128 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PL--LTILANFSAIIGASI 284 A++G+M+++EEIDA+ +M + V L+S R+ A +I++ PL L ++A+F A A++ Sbjct: 129 STAQLGAMRVSEEIDALESMAIPSVPYLVSTRVMAGMIAIVPLYSLAVIASFVASRFATV 188 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 + YD V+ F + +I +A MA A+ ++ GF Sbjct: 189 FL---YDQSPGVYDHYFSTFLNPTDILWSFAQAIAMALAVMLIHTYYGF 234 >gi|226304168|ref|YP_002764126.1| YrbE family protein [Rhodococcus erythropolis PR4] gi|226183283|dbj|BAH31387.1| putative YrbE family protein [Rhodococcus erythropolis PR4] Length = 259 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 31/81 (38%), Positives = 50/81 (61%) Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 Q GA +S +++ L + + G L+ A++IAG GSAI A++G+ I EEIDA+ +GL Sbjct: 72 DQIGAGSYSGAVVAFLIIGQAGPLVCALIIAGVGGSAICADLGARTIREEIDALEVLGLP 131 Query: 251 FVRILISPRIWALIISLPLLT 271 + L+ PR+ A+ + LL Sbjct: 132 VLERLVVPRMIAIAVVCLLLN 152 >gi|295135743|ref|YP_003586419.1| ABC-type transporter permease protein [Zunongwangia profunda SM-A87] gi|294983758|gb|ADF54223.1| ABC-type transporter permease protein [Zunongwangia profunda SM-A87] Length = 225 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 8/119 (6%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ----LREIGVLLTAVMIAGRSG 225 +V +SF GAV+A Q A L+ + L++ + E ++++AG+ G Sbjct: 25 IVCFLSFFIGAVVAIQTALNLNN---PLIPKSLVAFAARQSVILEFSPTFISIIMAGKVG 81 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 S I + IGSM++ E+IDA+ MG++ LI P+I A+ ++ P + ++ F I+GA + Sbjct: 82 SFITSSIGSMRVTEQIDALEVMGINSKNYLIFPKIIAM-LTYPFVIAISMFLGILGAYV 139 >gi|120401936|ref|YP_951765.1| hypothetical protein Mvan_0921 [Mycobacterium vanbaalenii PYR-1] gi|119954754|gb|ABM11759.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 284 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 23/203 (11%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 ++++ F+T GA+IA QG L+ G E + + L +R IG L T + +A G+ Sbjct: 73 IVIVGFLTMSAGALIAVQGYNTLAGVGVEALTGFASAYLNVRIIGPLTTGIGLAATIGAG 132 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL--LTILANF-------S 277 A++G+M+I EEIDA+ MG+ + L S R+ A +I+ +PL + +L +F + Sbjct: 133 ATAQLGAMRIAEEIDALEVMGVRSIAYLASTRLLAGMIVVIPLYCVAVLMSFVAARVGTT 192 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 AI G S ++ +Y F F + ++ ++A MA + ++ GF Sbjct: 193 AIYGQSTGVYDHY---FTTFLNPL-------DLVWSFVQAIAMAVTVMVIHTYYGFNASG 242 Query: 338 HSNSLGKKVTTCVVQSISIVIII 360 +G+ V V S+ +V+ + Sbjct: 243 GPAGVGEAVGRAVRASLIVVVFV 265 >gi|226365583|ref|YP_002783366.1| YrbE family protein [Rhodococcus opacus B4] gi|226244073|dbj|BAH54421.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 286 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/192 (23%), Positives = 88/192 (45%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 VV +S V + +G L G S L +IL RE+ ++ ++ +A + G+ Sbjct: 75 VVFAMSAVAATQVGIEGLRGLDLLGMGSLSGLLSAILNTRELAPVIASIALAAKVGTGFT 134 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A++G+M+I+EEI A+ M + + L S R+ + +I + L ++ S+ + + +VI + Sbjct: 135 AQLGAMRISEEISALDAMAIPSLPFLASTRLVSCLICVVPLYVVGLLSSYLASRLVIVTF 194 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 + FH T ++ +KA A I +V G+ +G+ Sbjct: 195 SGQSAGTYDYYFHLMLTPTDVAYSFVKAVVFATIIALVHCSYGYHAYGGPEGVGRAAGRA 254 Query: 350 VVQSISIVIIID 361 + SI + I+D Sbjct: 255 LRTSILAIGIVD 266 >gi|111023084|ref|YP_706056.1| hypothetical protein RHA1_ro06121 [Rhodococcus jostii RHA1] gi|110822614|gb|ABG97898.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length = 286 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/192 (23%), Positives = 88/192 (45%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 VV +S V + +G L G S L +IL RE+ ++ ++ +A + G+ Sbjct: 75 VVFAMSAVAATQVGIEGLRGLDLLGMGSLSGLLSAILNTRELAPVIASIALAAKVGTGFT 134 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A++G+M+I+EEI A+ M + + L S R+ + +I + L ++ S+ + + +VI + Sbjct: 135 AQLGAMRISEEISALDAMAIRSLPFLASTRLVSCLICVVPLYVVGLLSSYLASRLVIVTF 194 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 + FH T ++ +KA A I +V G+ +G+ Sbjct: 195 GGQSAGTYDYYFHLMLTPTDVAYSFVKAVVFATIIALVHCSYGYHAHGGPEGVGRAAGRA 254 Query: 350 VVQSISIVIIID 361 + SI + I+D Sbjct: 255 LRTSILAIGIVD 266 >gi|326382400|ref|ZP_08204092.1| putative YrbE family protein [Gordonia neofelifaecis NRRL B-59395] gi|326199130|gb|EGD56312.1| putative YrbE family protein [Gordonia neofelifaecis NRRL B-59395] Length = 268 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 48/213 (22%), Positives = 98/213 (46%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 R VG V++++ GA I QG L G + + S RE+ ++ A Sbjct: 47 RGAVLVGGGTAVVLVILGMAVGASIGIQGYASLDLVGMGSLTGFISSYANTRELAPMIAA 106 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 + A ++G + AEIGSM+I EEIDA+ +M + + ++S R+ A I ++ L I+ Sbjct: 107 IGFAAQAGCRLTAEIGSMRIAEEIDALESMAVRPIPYVVSTRVVAAITTIIPLYIVTLIL 166 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 + + A +V+ + + F++ ++ +IK ++ IV +GF Sbjct: 167 SFVAAKLVVILMHGQSGGTYDFYFNAFLKPQDLVFSVIKVLIFVVSVVIVHSYQGFYATG 226 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +G+ + S+ ++++ D + + + Sbjct: 227 GAEGVGRASGRAIRSSLIVIVVEDMILTLLMWG 259 >gi|302525561|ref|ZP_07277903.1| ABC transporter integral membrane protein [Streptomyces sp. AA4] gi|302434456|gb|EFL06272.1| ABC transporter integral membrane protein [Streptomyces sp. AA4] Length = 286 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 10/189 (5%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V+I ++ TG ++ QG L+Q G + + + RE+ L + ++ G Sbjct: 77 VMIGMTLFTGLIVGLQGYSALNQLGTAALTGFISAYFNTREVAPLSAGLALSATVGCGFT 136 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTILANFSAIIGASIVIWK 288 A++G+M+I+EEIDA+ M + + L++ R+ A + + +PL + S + I IW Sbjct: 137 AQLGAMRISEEIDALEVMAVPSMPYLVTTRVLAGVTAVIPLYAVGLLSSYLASRQITIWL 196 Query: 289 Y------YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 Y YD F +F + A + + C G A VG+ ++ Sbjct: 197 YGQSAGTYDHYFTLFLPPEDVLWSFAKVIVFSVLVILSHCYYGYTASGGPAGVGI---AV 253 Query: 343 GKKVTTCVV 351 G+ V T +V Sbjct: 254 GRAVRTSIV 262 >gi|326331672|ref|ZP_08197960.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] gi|325950471|gb|EGD42523.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] Length = 277 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 6/212 (2%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 R VG + V++L+S G + +G L G + + RE+G L+ A Sbjct: 56 RGAIIVGGGTIGVMVLLSVSVGTSLGIEGFNGLELVGLAPLVGFISATANTRELGPLVAA 115 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTILANF 276 + + + G A++G+M++NEE+DA+ M + V L++ R+ A ++++ PL I Sbjct: 116 LALGAQVGCRFTAQLGAMRVNEEVDALEVMSVRPVNYLVATRLVATMLAIVPLYVIGLLG 175 Query: 277 SAIIGASIVIWKYYDIP--FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 S I S V+ + P F +F F T+ +I LIK A + ++ G A Sbjct: 176 SYIASESTVVMLFGQSPGQFDHYFLEF---LTMRDIGFSLIKILIFAAIVVLIHCWYGLA 232 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 V S ++G+ + S ++++++ L + Sbjct: 233 VSAGSLNVGEATGRSIRASFVVIVVLNMLLTV 264 >gi|312138209|ref|YP_004005545.1| integral membrane protein yrbe2b [Rhodococcus equi 103S] gi|311887548|emb|CBH46860.1| putative integral membrane protein YrbE2B [Rhodococcus equi 103S] Length = 283 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 47/169 (27%), Positives = 86/169 (50%), Gaps = 6/169 (3%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V +V ++ TG IA QG L G E + + + +R ++ + +A G+ Sbjct: 72 VVIVGFLTLFTGGTIAVQGFSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGLAATIGAG 131 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PL--LTILANFSAIIGASI 284 A++G+M+++EEIDA+ +M + V L+S R+ A +I++ PL L ++A+F A A++ Sbjct: 132 STAQLGAMRVSEEIDALESMAIPSVPYLVSTRVMAGMIAIVPLYSLAVIASFVASRFATV 191 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 + YD V+ F + +I +A MA A+ ++ GF Sbjct: 192 FL---YDQSPGVYDHYFSTFLNPTDILWSFAQAIAMALAVMLIHTYYGF 237 >gi|146298213|ref|YP_001192804.1| hypothetical protein Fjoh_0449 [Flavobacterium johnsoniae UW101] gi|146152631|gb|ABQ03485.1| protein of unknown function DUF140 [Flavobacterium johnsoniae UW101] Length = 248 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 2/114 (1%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTAVMIAGRSGSAI 228 +V ISF G V+A Q A L+ + I + + E +V++AG+ GS I Sbjct: 48 IVCFISFFIGGVVAIQTALNLTNPLIPKYLIGFATRQSVVLEFAPTFISVIMAGKMGSYI 107 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 + IG+M++ E+IDA+ MG++ V L+ P+I AL++ P + ++ F I G Sbjct: 108 TSSIGTMRVTEQIDALEVMGVNSVNYLVFPKIIALLMY-PFVIGISMFLGIFGG 160 >gi|126436262|ref|YP_001071953.1| hypothetical protein Mjls_3685 [Mycobacterium sp. JLS] gi|126236062|gb|ABN99462.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 285 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 49/198 (24%), Positives = 97/198 (48%), Gaps = 7/198 (3%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 ++++ F+T G +A QG L G E + L + + +R + + +A G+ Sbjct: 74 LVIVGFLTLAAGGTLAVQGFSSLGDIGIEALTGFLAAFINVRIAAPTVAGIGLAATFGAG 133 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + A++G+M+INEEIDA+ +M + V L+S RI A +I++ L +A + + + V Sbjct: 134 VTAQLGAMRINEEIDALESMAIRPVEYLVSTRIAAGMIAITPLYAIAVILSFLASQFVTV 193 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG-FAVGVHSN---SLG 343 + ++ F + ++ ++A MA I +V G FA G S ++G Sbjct: 194 MLFGQSGGLYDHYFDTFLNPIDLLWSFLQAVLMAITILLVHTYFGYFASGGPSGVGVAVG 253 Query: 344 KKVTTCVVQSISIVIIID 361 V T ++ +S+ +++ Sbjct: 254 NAVRTSLILVVSVTLLVS 271 >gi|226304448|ref|YP_002764406.1| YrbE family protein [Rhodococcus erythropolis PR4] gi|229494442|ref|ZP_04388205.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] gi|226183563|dbj|BAH31667.1| putative YrbE family protein [Rhodococcus erythropolis PR4] gi|229318804|gb|EEN84662.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] Length = 283 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 7/138 (5%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V +V ++ TG IA QG L G E + + + +R ++ + +A G+ Sbjct: 72 VVIVGFLTLFTGGTIAVQGYSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGLAATIGAG 131 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPL--LTILANFSAIIGASI 284 A++G+M+++EEIDA+ TM + + L+S R+ A +I+ +PL L ++A+F A A++ Sbjct: 132 STAQLGAMRVSEEIDALETMAIPSIPYLVSTRVMAGMIAIIPLYSLAVIASFVASRFATV 191 Query: 285 VIWK----YYDIPFAVFF 298 ++ YD F F Sbjct: 192 FLYNQSGGVYDHYFTTFL 209 >gi|183984679|ref|YP_001852970.1| hypothetical protein MMAR_4711 [Mycobacterium marinum M] gi|183178005|gb|ACC43115.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length = 281 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 59/104 (56%), Gaps = 1/104 (0%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +V ++ G +A QG L G E + L + + +R ++ + +A G+ + Sbjct: 72 IVGFLTLAAGGTLAVQGYSSLGNIGIEALTGFLAAFINVRIAAPIVAGIGLAATFGAGVT 131 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTI 272 A++G+M+INEEIDA+ +M + V L+S RI A ++++ PL +I Sbjct: 132 AQLGAMRINEEIDALESMAIRPVSYLVSTRIVAGMMAITPLYSI 175 >gi|296141836|ref|YP_003649079.1| hypothetical protein Tpau_4171 [Tsukamurella paurometabola DSM 20162] gi|296029970|gb|ADG80740.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM 20162] Length = 285 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 63/112 (56%), Gaps = 3/112 (2%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +++++ G +A Q L G + + ++ +RE +L A A ++G + Sbjct: 76 MMVVLGLAVGGTVAVQAFSTLDLLGMGPLTGSISALANIREFAPILAAAGFAVQAGCRMT 135 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLP--LLTILANFSA 278 AEIG+M+INEEIDA+ ++GL + ++S R+ A LI +P L+ I+ +F A Sbjct: 136 AEIGAMRINEEIDALESLGLRSISFVVSTRVLAGLIAVIPTFLIAIVVSFFA 187 >gi|317508868|ref|ZP_07966507.1| hypothetical protein HMPREF9336_02879 [Segniliparus rugosus ATCC BAA-974] gi|316252829|gb|EFV12260.1| hypothetical protein HMPREF9336_02879 [Segniliparus rugosus ATCC BAA-974] Length = 304 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 38/158 (24%), Positives = 76/158 (48%) Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268 RE+ ++TA+ A ++G I AE+G+M+I+EEIDAI G+ + +I+ R+ A +IS+ Sbjct: 134 RELAPMVTAIGFAAQTGCRITAEVGAMRISEEIDAIEAQGIQSIPFVITTRVIAGVISII 193 Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328 L ++ + + V+ + ++ F S ++ ++KA AI + Sbjct: 194 PLYVMTTLLGYVSCAFVVNVVHGEASGTYYHYFDSFIHPIDVVYSVVKAIVFVVAIIAIH 253 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 +G+ +G + S+ V++ D + I Sbjct: 254 GYQGYYASGGPEGVGVAAGRAIRTSLITVVVADMVLTI 291 >gi|169628783|ref|YP_001702432.1| hypothetical protein MAB_1693 [Mycobacterium abscessus ATCC 19977] gi|169240750|emb|CAM61778.1| Conserved hypothetical protein (YrbE family?) [Mycobacterium abscessus] Length = 289 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 54/213 (25%), Positives = 103/213 (48%), Gaps = 2/213 (0%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 +RQ ++ + V +L++ G ++ Q A Q GA + + +R+ L+ Sbjct: 69 VRQAAFMAGTAVMPTVLVALPIGVTLSIQFALLAGQVGATSLAGAASGLAVVRQAASLVA 128 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A+++A GSA+ A++G + EE A+ MG+ VR L+ PR A I+ LT + F Sbjct: 129 AMLLASAVGSAMTADLGCRTMREETAAMEVMGVSVVRRLVVPRFAAAIVIGIALTGVVCF 188 Query: 277 SAIIGASIV-IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 + + + ++ P + F S F S AT A++ L KA + ++A ++G A Sbjct: 189 VGFLASYLFNVFVQGGAPGS-FVSTFASFATPADLLLALFKAAAYGAIVAVIACQKGLAA 247 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + V VV+S+ +++I++ + + Y Sbjct: 248 HGGPTGVANSVNAAVVESVLLLMIVNVVVSQVY 280 >gi|319950491|ref|ZP_08024404.1| putative YrbE family protein [Dietzia cinnamea P4] gi|319435850|gb|EFV91057.1| putative YrbE family protein [Dietzia cinnamea P4] Length = 262 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 2/200 (1%) Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 L++ GAV+A Q + Q GAE F+ + +++ L+T+++IAG +GSA+ A++ Sbjct: 58 LVAIPFGAVVAMQTGSLVQQLGAEAFTGATGVLAVVQQGAPLVTSLLIAGAAGSAVAADL 117 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV-IWKYYD 291 G+ I EE+DA+R +G+D ++ L+ PR+ +++ LL L + I G + I Sbjct: 118 GARTIREELDAMRVLGIDPIQRLVVPRVLGMMLVAVLLNGLVSIVGISGGYVFNIMLQGG 177 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 P A S F + A L + IKA G+VA G +G V VV Sbjct: 178 TPGAYLMS-FGALAQLPDFIMSSIKALIFGLIAGVVASYCGMNPKGGPKGVGDAVNLGVV 236 Query: 352 QSISIVIIIDSLFAIFYFAI 371 + ++ + + Y I Sbjct: 237 LTFLLLFFANLILTAMYLQI 256 >gi|296169578|ref|ZP_06851198.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895844|gb|EFG75539.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 287 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 59/104 (56%), Gaps = 1/104 (0%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +V ++ G +A QG L G E + L + + +R ++ + +A G+ + Sbjct: 78 IVGFLTLAAGGTLAVQGYSSLGNIGIEALTGFLAAFINVRIAAPIVAGIGLAATFGAGVT 137 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTI 272 A++G+M+INEEIDA+ +M + + L+S RI A ++++ PL +I Sbjct: 138 AQLGAMRINEEIDALESMAIRPISYLVSTRIAAGMMAITPLYSI 181 >gi|145222688|ref|YP_001133366.1| hypothetical protein Mflv_2100 [Mycobacterium gilvum PYR-GCK] gi|315443152|ref|YP_004076031.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|145215174|gb|ABP44578.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] gi|315261455|gb|ADT98196.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 284 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 65/227 (28%), Positives = 112/227 (49%), Gaps = 21/227 (9%) Query: 152 FLLSLIRQMYYVGVSG---------VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDL 202 + + L+RQ+ +G+ V +V ++ TGA++A QG S+ G E + Sbjct: 48 YRIELVRQIAQMGLGAGALIVIGGTVAIVGFLTVTTGALVAVQGYTDFSEIGVEALTGFA 107 Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 + +R I TAV +A G+ A++G+M+INEEIDA+ MG+ V L S R+ A Sbjct: 108 SAFFNVRLIAPATTAVALAATIGAGATAQLGAMRINEEIDALEVMGIRSVAYLASTRVLA 167 Query: 263 -LIISLPL--LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319 L++ +PL + +LA+F A + VI+ + +F F + L F I Sbjct: 168 GLLVVIPLYCVGVLASFWAARFGTTVIYGQSTGVYDHYFRTFLNPTDLVWSFAQCI---V 224 Query: 320 MACAIGIVAMKEGFA-----VGVHSNSLGKKVTTCVVQSISIVIIID 361 +A I +V GF+ GV ++G+ V T ++ S ++++I Sbjct: 225 LAIVIMLVHTYYGFSARGGPAGV-GEAVGRAVRTSLILSAFVLVMIS 270 >gi|225011579|ref|ZP_03702017.1| protein of unknown function DUF140 [Flavobacteria bacterium MS024-2A] gi|225004082|gb|EEG42054.1| protein of unknown function DUF140 [Flavobacteria bacterium MS024-2A] Length = 245 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 28/208 (13%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ----LREIGVLLTAVMIAGRSG 225 +V ISF G V+A Q A L + +L+ + E ++++AG+ G Sbjct: 45 IVSFISFFVGGVVAIQTALNLEN---PLLPKNLIGFAARQSIILEFAPTFISIIMAGKVG 101 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 S I + IG+M++ E+IDA+ MG++ LI P+I +L + PL+ ++ F I G I Sbjct: 102 SYITSSIGTMRVTEQIDALEVMGINTHNYLIFPKIVSLSL-YPLVICISMFLGIFGGYI- 159 Query: 286 IWKYYDIPFAVFFSRFHSTATLA----------NIFTGLIKAPFMACAIGIVAMKEGFAV 335 A + F S+A +I IK F + + + G+ + Sbjct: 160 ---------AAVYGGFSSSADYIEGIQMDFIPFHITYAFIKTSFFSFILATIPAYHGYYM 210 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + +GK T V + ++I+++ L Sbjct: 211 NGGALEVGKASTVSFVWTSVVIILLNYL 238 >gi|326382983|ref|ZP_08204672.1| hypothetical protein SCNU_08601 [Gordonia neofelifaecis NRRL B-59395] gi|326198119|gb|EGD55304.1| hypothetical protein SCNU_08601 [Gordonia neofelifaecis NRRL B-59395] Length = 268 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 60/239 (25%), Positives = 120/239 (50%), Gaps = 11/239 (4%) Query: 117 KIVKFINDSCSQ-AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K+ K + +Q +I+ L + + ++++ F I+Q +++ + LI+ Sbjct: 11 KLAKAGEGALAQTGNIVQLFVDVARQLFVRPFQWREF----IQQAWFIASVTILPTALIA 66 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 GA+++ Q + Q GAE ++ ++ +++ L+T++++AG +GSA+ A++GS Sbjct: 67 IPFGAIVSLQTGSLIKQLGAESYTGAASVLVVVQQGSPLVTSLLVAGAAGSAVAADLGSR 126 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA---SIVIWKYYDI 292 I EEIDA+ +G++ V+ L+ PR+ A+++ LL L I G ++V+ Sbjct: 127 TIREEIDAMEVLGINPVQRLVVPRVLAMVLVAVLLNGLVAVVGIGGGYFFNVVVQG--GT 184 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 P A + + F + A L +++ +KA G+VA +G +G V VV Sbjct: 185 PGA-YLASFGALAQLPDLYISTLKAVIFGVIAGVVAAYKGLNPKGGPKGVGDAVNQSVV 242 >gi|108800638|ref|YP_640835.1| hypothetical protein Mmcs_3672 [Mycobacterium sp. MCS] gi|119869777|ref|YP_939729.1| hypothetical protein Mkms_3745 [Mycobacterium sp. KMS] gi|108771057|gb|ABG09779.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119695866|gb|ABL92939.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] Length = 285 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 48/198 (24%), Positives = 96/198 (48%), Gaps = 7/198 (3%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 ++++ F+T G +A QG L G E + L + + +R + + +A G+ Sbjct: 74 LVIVGFLTLAAGGTLAVQGFSSLGDIGIEALTGFLAAFINVRIAAPTVAGIGLAATFGAG 133 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + A++G+M+INEEIDA+ +M + V L+S RI A +I++ L +A + + + Sbjct: 134 VTAQLGAMRINEEIDALESMAIRPVEYLVSTRIAAGMIAITPLYAIAVILSFVASQFTTV 193 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG-FAVGVHSN---SLG 343 + ++ F + ++ ++A MA I +V G FA G S ++G Sbjct: 194 MLFGQSAGLYDHYFDTFLNPIDLLWSFLQAVLMAITILLVHTYFGYFASGGPSGVGVAVG 253 Query: 344 KKVTTCVVQSISIVIIID 361 V T ++ +S+ +++ Sbjct: 254 NAVRTSLILVVSVTLLVS 271 >gi|296165592|ref|ZP_06848117.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899065|gb|EFG78546.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 318 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 47/169 (27%), Positives = 88/169 (52%), Gaps = 1/169 (0%) Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V+ VP V L++ GA+IA Q + +++ GA + + +R+ + +++ G + Sbjct: 107 VTAVPAV-LMAVPFGAMIAVQVSGLVNEVGANSLIGSAIGVGVVRQGAPMTAGLLMGGAA 165 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 SAI A+ G+ I EE+DA+RT+G+D V+ L+ PR AL++ P+L + S + A Sbjct: 166 ASAIAADFGARAIREELDALRTLGIDPVQRLVVPRFLALVLIAPILCTIVIASGVAAAFT 225 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 + D+ F+ F S A + +++ + K A + I++ G Sbjct: 226 ISVTVNDVTPGSFWLSFGSFAKMVDVWFAMGKTVTFAAFVAIISSMRGM 274 >gi|296166534|ref|ZP_06848965.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898146|gb|EFG77721.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 280 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 20/203 (9%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V ++ +G VIA QG L G E + L + L +R + ++ + +A G+ Sbjct: 69 VGVAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAG 128 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL--LTILANFSA------ 278 A++G+M+++EEIDA+ M ++ V L+S R+ A LI +PL L++LA F A Sbjct: 129 ATAQLGAMRVSEEIDAVECMAVESVSYLVSTRLIAGLIAIIPLYSLSVLAAFFAARFTTV 188 Query: 279 -IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 I G S ++ +Y F++ +++ ++A M+ A+ +V G+ Sbjct: 189 YINGQSKGLYDHY----------FNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNASG 238 Query: 338 HSNSLGKKVTTCVVQSISIVIII 360 +G V V S+ +V++I Sbjct: 239 GPVGVGIAVGQAVRTSLIVVVVI 261 >gi|126662313|ref|ZP_01733312.1| hypothetical protein FBBAL38_03140 [Flavobacteria bacterium BAL38] gi|126625692|gb|EAZ96381.1| hypothetical protein FBBAL38_03140 [Flavobacteria bacterium BAL38] Length = 233 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 2/114 (1%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ-LREIGVLLTAVMIAGRSGSAI 228 +V ISF G V+A Q A L+ F I + + E ++++AG+ GS I Sbjct: 33 IVSFISFFVGGVVAIQTALNLTNPLIPKFLIGFATRQSVILEFAPTFISIIMAGKMGSFI 92 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 + IG+M++ E+IDA+ MG++ + L+ P+I AL++ P + L+ F + G Sbjct: 93 TSSIGTMRVTEQIDALEVMGVNSLNYLVFPKIIALLL-YPFVIGLSMFLGVFGG 145 >gi|183982885|ref|YP_001851176.1| integral membrane protein, YrbE3B [Mycobacterium marinum M] gi|183176211|gb|ACC41321.1| conserved hypothetical integral membrane protein, YrbE3B [Mycobacterium marinum M] Length = 284 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 72/131 (54%), Gaps = 7/131 (5%) Query: 149 FKGFLLSLIRQMYY----VGVSGVPVVIL--ISFVTGAVIAQQGAFQLSQFGAEIFSIDL 202 ++ LL +I QM + + V G VVI+ ++ TGA++A QG Q + G E + Sbjct: 48 YRSELLRVIAQMGFGAGTLAVIGGTVVIVGFLAMTTGAIVAVQGYNQFASVGVEALTGFA 107 Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 + REI V +A G+ A++G+M+INEEIDA+ +G+ V L S R+ A Sbjct: 108 SAFFNTREIQPGTVMVALAATVGAGATAQLGAMRINEEIDALEVIGIRSVSYLASTRVLA 167 Query: 263 -LIISLPLLTI 272 +++++PL + Sbjct: 168 GVVVAIPLFCV 178 >gi|240170398|ref|ZP_04749057.1| hypothetical protein MkanA1_13890 [Mycobacterium kansasii ATCC 12478] Length = 281 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 59/104 (56%), Gaps = 1/104 (0%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +V ++ G +A QG L G E + L + + +R ++ + +A G+ + Sbjct: 72 IVGFLTLAAGGTLAVQGYSSLGNIGIEALTGFLAAFINVRISAPVVAGIGLAATFGAGVT 131 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTI 272 A++G+M+INEEIDA+ +M + + L+S RI A ++++ PL +I Sbjct: 132 AQLGAMRINEEIDALESMAIRPISYLVSTRIVAGMLAITPLYSI 175 >gi|260061863|ref|YP_003194943.1| hypothetical protein RB2501_09685 [Robiginitalea biformata HTCC2501] gi|88785996|gb|EAR17165.1| hypothetical protein RB2501_09685 [Robiginitalea biformata HTCC2501] Length = 245 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 21/162 (12%) Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 E T++++AG+ GS I + IG+M++ E+IDA+ MG++ + L+ P+I A+++ P Sbjct: 86 EFAPTFTSIIMAGKVGSYITSSIGTMRVTEQIDALEVMGVNALNYLVFPKIIAMLL-YPF 144 Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA----------NIFTGLIKAPF 319 + +A + I+G I A F F S+A ++ IK+ Sbjct: 145 VVAIAMYVGILGGWI----------AGVFGGFSSSADFIEGLQLDFIPFHVMYSFIKSVV 194 Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 A I V GF + + +GK T V + ++I+++ Sbjct: 195 FAFIIATVPSYHGFYMKGGALEVGKASTVSFVWTSVVIIVMN 236 >gi|240170055|ref|ZP_04748714.1| hypothetical integral membrane protein [Mycobacterium kansasii ATCC 12478] Length = 280 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 20/203 (9%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V ++ +G VIA QG L G E + L + L +R + ++ + +A G+ Sbjct: 69 VGVAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAG 128 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL--LTILANFSA------ 278 A++G+M+++EEIDA+ M + V L+S R+ A L+ +PL L++LA F A Sbjct: 129 ATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARFTTV 188 Query: 279 -IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 I G S ++ +Y F++ +++ ++A M+ A+ +V G+ Sbjct: 189 FINGQSKGLYDHY----------FNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNASG 238 Query: 338 HSNSLGKKVTTCVVQSISIVIII 360 S +G V V S+ +V++I Sbjct: 239 GSVGVGIAVGQAVRTSLIVVVVI 261 >gi|118470997|ref|YP_890127.1| TrnB2 protein [Mycobacterium smegmatis str. MC2 155] gi|118172284|gb|ABK73180.1| TrnB2 protein [Mycobacterium smegmatis str. MC2 155] Length = 287 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 26/209 (12%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V ++ +G VIA QG L G E + L + L +R + ++ + +A G+ Sbjct: 76 VGVAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAGIALAATIGAG 135 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PL--LTILANFSA------ 278 A++G+M++ EEIDA+ +M + V L+S R+ A +I++ PL L++LA F A Sbjct: 136 ATAQLGAMRVAEEIDAVESMAVHAVSYLVSTRLLAGLIAIVPLYSLSVLAAFFAARFTTV 195 Query: 279 -IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF---- 333 I G S ++ +Y F++ +++ ++A MA A+ +V G+ Sbjct: 196 FINGQSAGLYDHY----------FNTFLIPSDLLWSFLQAIVMAIAVMLVHTYYGYNASG 245 Query: 334 -AVGVHSNSLGKKVTTCVVQSISIVIIID 361 VGV ++G+ V T ++ ++I + I Sbjct: 246 GPVGV-GIAVGQAVRTSLIVVVTITLFIS 273 >gi|120402601|ref|YP_952430.1| hypothetical protein Mvan_1595 [Mycobacterium vanbaalenii PYR-1] gi|119955419|gb|ABM12424.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 280 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 3/110 (2%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V + ++ +G VIA QG L G E + L + L +R + ++ + +A G+ Sbjct: 71 VTVFLTLASGGVIAVQGYASLGDIGIEALTGFLSAFLNVRIVAPVIAGIALAATIGAGST 130 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL--LTILANF 276 A++G+M+I EEIDA+ M + + L++ R+ A +I+ +PL L IL +F Sbjct: 131 AQLGAMRIAEEIDALEVMAVRSMAYLVATRMIAGVIVIVPLYSLAILTSF 180 >gi|271964524|ref|YP_003338720.1| resistance to organic solvents ABC transporter permease [Streptosporangium roseum DSM 43021] gi|270507699|gb|ACZ85977.1| ABC-type transport system involved in resistance to organic solvents permease component-like protein [Streptosporangium roseum DSM 43021] Length = 269 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 65/117 (55%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 ++ + + I+Q +++ V+L+S GA +A Q Q GA + + + Sbjct: 38 TWDVRTWFWEYIQQCWFLARVTSLPVLLVSLPLGATVALQVGQLAWQLGASSATGGAVVV 97 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 +RE+ + +A++IAG GSA+ ++IG+ I +E+ A+ M ++ + L++PR+WA Sbjct: 98 GLVREVAPMASALLIAGAGGSAMTSDIGARNIRDELAAMEVMAVNPIHRLVTPRLWA 154 >gi|183980442|ref|YP_001848733.1| integral membrane protein YrbE1B [Mycobacterium marinum M] gi|183173768|gb|ACC38878.1| conserved hypothetical integral membrane protein YrbE1B [Mycobacterium marinum M] Length = 289 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 96/181 (53%), Gaps = 13/181 (7%) Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 R+ F + N + + G + + +++S A ++++ G+ + ++ +L LI Q Sbjct: 8 RARFPRAIANFNRYAGS-VTRGLDESGRLAW---FILTSLGQSGHALRYYRKEILRLIAQ 63 Query: 160 MYYVGVSGVPVV----ILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 + +G + VV ++ FVT ++IA QG L G E F+ +++ +R G Sbjct: 64 IG-MGTGAMAVVGGTAAIVGFVTLSGSSLIAIQGFASLGNIGVEAFTGFFSALVNVRIAG 122 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPLLT 271 ++T V +A G+ AE+G+M+I+EEIDA+ MG+ + L S RI A L++ +PL Sbjct: 123 PVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISYLASTRIMAGLVVIIPLYA 182 Query: 272 I 272 + Sbjct: 183 L 183 >gi|118616794|ref|YP_905126.1| integral membrane protein YrbE1B [Mycobacterium ulcerans Agy99] gi|118568904|gb|ABL03655.1| conserved hypothetical integral membrane protein YrbE1B [Mycobacterium ulcerans Agy99] Length = 289 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 96/181 (53%), Gaps = 13/181 (7%) Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 R+ F + N + + G + + +++S A ++++ G+ + ++ +L LI Q Sbjct: 8 RARFPRAIANFNRYAGS-VTRGLDESGRLAW---FILTSLGQSGHALRYYRKEILRLIAQ 63 Query: 160 MYYVGVSGVPVV----ILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 + +G + VV ++ FVT ++IA QG L G E F+ +++ +R G Sbjct: 64 IG-MGTGAMAVVGGTAAIVGFVTLSGSSLIAIQGFASLGNIGVEAFTGFFSALVNVRIAG 122 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPLLT 271 ++T V +A G+ AE+G+M+I+EEIDA+ MG+ + L S RI A L++ +PL Sbjct: 123 PVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIQSISYLASTRIMAGLVVIIPLYA 182 Query: 272 I 272 + Sbjct: 183 L 183 >gi|254822746|ref|ZP_05227747.1| ABC-transporter integral membrane protein [Mycobacterium intracellulare ATCC 13950] Length = 280 Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 55/203 (27%), Positives = 99/203 (48%), Gaps = 20/203 (9%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V ++ +G VIA QG L G E + L + L +R + ++ + +A G+ Sbjct: 69 VGVAAFLTLASGGVIAVQGYSSLGHIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAG 128 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL--LTILANFSA------ 278 A++G+M+++EEIDA+ M + V L+S R+ A LI +PL L++LA F A Sbjct: 129 ATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLIAIIPLYSLSVLAAFFAARFTTV 188 Query: 279 -IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 I G S ++ +Y F++ +++ ++A M+ A+ +V G+ Sbjct: 189 YINGQSKGLYDHY----------FNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNASG 238 Query: 338 HSNSLGKKVTTCVVQSISIVIII 360 +G V V S+ +V++I Sbjct: 239 GPVGVGIAVGQAVRTSLIVVVVI 261 >gi|119867718|ref|YP_937670.1| hypothetical protein Mkms_1677 [Mycobacterium sp. KMS] gi|120401521|ref|YP_951350.1| hypothetical protein Mvan_0499 [Mycobacterium vanbaalenii PYR-1] gi|126434219|ref|YP_001069910.1| hypothetical protein Mjls_1626 [Mycobacterium sp. JLS] gi|145221252|ref|YP_001131930.1| hypothetical protein Mflv_0653 [Mycobacterium gilvum PYR-GCK] gi|315441853|ref|YP_004074732.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|49072909|gb|AAT51760.1| TrnB2 [Mycobacterium vanbaalenii PYR-1] gi|119693807|gb|ABL90880.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] gi|119954339|gb|ABM11344.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] gi|126234019|gb|ABN97419.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] gi|145213738|gb|ABP43142.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] gi|315260156|gb|ADT96897.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 285 Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 62/200 (31%), Positives = 98/200 (49%), Gaps = 29/200 (14%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---------VPVVIL 173 D QA G IS+T + A++Y+ + ++RQ+ +G+ V VV Sbjct: 26 RDLGDQARFYGQSISSTVQ-AATTYRAE-----VLRQIAAIGLGAGSLAVVGGTVAVVAF 79 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 ++ T A +A Q Q+SQ G E + + + +R +A A G+ A++G Sbjct: 80 LNLSTSAALASQAYNQMSQVGVEALAGFTSAYVNVRLATPASSAFAFAATIGAGTTAQLG 139 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL--LTILANF-------SAIIG-A 282 +MKINEEIDA+ MG+ + L S R+ A +I+ +PL + +L +F +A G Sbjct: 140 AMKINEEIDALAVMGIRPIAYLASTRLLAGVIVVVPLYCVALLMSFFSVRVITTAFYGQG 199 Query: 283 SIVIWKYYDI---PFAVFFS 299 S V Y+D P AVFFS Sbjct: 200 SGVFDHYFDTFLNPQAVFFS 219 >gi|145222147|ref|YP_001132825.1| hypothetical protein Mflv_1555 [Mycobacterium gilvum PYR-GCK] gi|315442586|ref|YP_004075465.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|145214633|gb|ABP44037.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] gi|315260889|gb|ADT97630.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 280 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 106/209 (50%), Gaps = 26/209 (12%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V ++ +G VIA QG L G E + L + L +R + ++ + +A G+ Sbjct: 69 VGVAAFMTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAGIALAATIGAG 128 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PL--LTILANFSA------ 278 A++G+M++ EEIDA+ M + V L+S R+ A +I++ PL L++LA F A Sbjct: 129 ATAQLGAMRVAEEIDAVEAMAVHAVSYLVSTRLIAGLIAIVPLYALSVLAAFFAARFTTV 188 Query: 279 -IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF---- 333 I G S ++ +Y F++ +++ ++A M+ A+ +V G+ Sbjct: 189 YINGQSAGLYDHY----------FNTFLVPSDLLWSFLQAIVMSIAVMLVHTYYGYNASG 238 Query: 334 -AVGVHSNSLGKKVTTCVVQSISIVIIID 361 VGV ++G+ V T ++ ++IV++I Sbjct: 239 GPVGV-GIAVGQAVRTSLIVVVTIVLMIS 266 >gi|331699195|ref|YP_004335434.1| hypothetical protein Psed_5448 [Pseudonocardia dioxanivorans CB1190] gi|326953884|gb|AEA27581.1| protein of unknown function DUF140 [Pseudonocardia dioxanivorans CB1190] Length = 280 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 40/142 (28%), Positives = 76/142 (53%), Gaps = 13/142 (9%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVIL--------ISFVTGAVIAQQGAFQLSQFGAEIFS 199 +++G + L+ ++ + SG +VIL +S G+++ QG L G E + Sbjct: 43 RYRGEIARLLAEVSFG--SGALIVILGTAGVMAALSLFVGSLVGLQGFRALDSLGVEALT 100 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 + + R+I L+ A + G+ A++G+M+I+EE+DA+ M + V L++ R Sbjct: 101 GFITAYFNTRDIAPLVAASALTATLGAGFTAQLGAMRISEEVDALEVMAVPSVPFLVTTR 160 Query: 260 IWALIIS-LPLLTI--LANFSA 278 + A +I+ +P+ TI LA+F A Sbjct: 161 VIAGMIAVIPMYTIGLLASFVA 182 >gi|169631233|ref|YP_001704882.1| hypothetical protein MAB_4155c [Mycobacterium abscessus ATCC 19977] gi|169243200|emb|CAM64228.1| Conserved hypothetical protein [Mycobacterium abscessus] Length = 255 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 8/194 (4%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P +L++F ++ + GA LS A F + ++G ++T +++AG +A Sbjct: 56 IPFTVLVAFTLNILLREIGAADLSG-AATAFG-------TVTQLGPVVTVLVVAGAGATA 107 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ I EEIDA++ +G+D ++ L+ PR+ A LL L ++G + Sbjct: 108 ICADLGARTIREEIDAMQVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGMVGGYVFSV 167 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + F + L + +KA G+V G V +G V Sbjct: 168 FLQGVNPGAFINGLTVLTGLGELMISEVKAFLFGIFAGLVGCYRGLTVKGGPKGVGDAVN 227 Query: 348 TCVVQSISIVIIID 361 VV + + +I+ Sbjct: 228 ETVVYAFICLFVIN 241 >gi|134098921|ref|YP_001104582.1| putative ABC transport system permease protein [Saccharopolyspora erythraea NRRL 2338] gi|291009385|ref|ZP_06567358.1| putative ABC transport system permease protein [Saccharopolyspora erythraea NRRL 2338] gi|133911544|emb|CAM01657.1| putative ABC transport system permease protein [Saccharopolyspora erythraea NRRL 2338] Length = 279 Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 10/181 (5%) Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG + QG L+Q G + + + REI L+ + ++ G+ A++G+M+I Sbjct: 78 TGVTVGLQGFSALNQIGISTLTGFMTAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRI 137 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTILANFSAIIGASIVIWKY------Y 290 +EEIDA+ M + + L++ RI A ++ +PL I S + + +W + Y Sbjct: 138 SEEIDALEVMAVRSLPYLVTTRIVAGFVAVVPLYVIGLLTSYVASRQVTVWFFGQSGGTY 197 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 D F++F + + + C G A VGV ++G+ V T + Sbjct: 198 DHYFSLFLPPVDVLWSFGKVLVFSVAVILTHCFYGYRAAGGPAGVGV---AVGRAVRTSI 254 Query: 351 V 351 V Sbjct: 255 V 255 >gi|120406151|ref|YP_955980.1| hypothetical protein Mvan_5203 [Mycobacterium vanbaalenii PYR-1] gi|119958969|gb|ABM15974.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 280 Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 106/209 (50%), Gaps = 26/209 (12%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V ++ +G VIA QG L G E + L + L +R + ++ + +A G+ Sbjct: 69 VGVAAFMTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAGIALAATIGAG 128 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PL--LTILANFSA------ 278 A++G+M++ EEIDA+ +M + V L+S R+ A +I++ PL L++LA F A Sbjct: 129 ATAQLGAMRVAEEIDAVESMAVHAVSYLVSTRLIAGLIAIVPLYALSVLAAFFAARFTTV 188 Query: 279 -IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF---- 333 I G S ++ +Y F++ +++ ++A M+ A+ +V G+ Sbjct: 189 YINGQSAGLYDHY----------FNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNASG 238 Query: 334 -AVGVHSNSLGKKVTTCVVQSISIVIIID 361 VGV ++G+ V T ++ ++IV+ I Sbjct: 239 GPVGV-GIAVGQAVRTSLIVVVTIVLFIS 266 >gi|3123858|gb|AAC15953.1| hypothetical integral membrane protein [Campylobacter jejuni] Length = 133 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 32/89 (35%), Positives = 45/89 (50%) Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 +I+G +V DI F F RF + +I GL KAP IG++A GF V Sbjct: 5 SILGGMVVAKINLDISFGEFLRRFREAVEMKHIIIGLAKAPIFGFLIGLIACFRGFEVKN 64 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + S+G T VV +I VI D+LF++ Sbjct: 65 TTQSIGIYTTKSVVNAIFWVIAFDALFSV 93 >gi|41406661|ref|NP_959497.1| hypothetical protein MAP0563 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395010|gb|AAS02880.1| hypothetical protein MAP_0563 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 280 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 55/208 (26%), Positives = 104/208 (50%), Gaps = 23/208 (11%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V ++ +G VIA QG L G E + L + L +R + ++ + +A G+ Sbjct: 69 VGVAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAG 128 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PL--LTILANFSA------ 278 A++G+M+++EEIDA+ M + V L+S R+ A +I++ PL L++LA F A Sbjct: 129 ATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLIAIVPLYSLSVLAAFFAARFTTV 188 Query: 279 -IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 I G S ++ +Y F++ +++ ++A M+ A+ +V G+ Sbjct: 189 YINGQSKGLYDHY----------FNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGY--NA 236 Query: 338 HSNSLGKKVTTC-VVQSISIVIIIDSLF 364 H +G + V++ IV+++ +LF Sbjct: 237 HGGPVGVGIAVGQAVRTSLIVVVVITLF 264 >gi|118463834|ref|YP_879936.1| ABC transporter transmembrane protein [Mycobacterium avium 104] gi|254773612|ref|ZP_05215128.1| ABC-transporter integral membrane protein [Mycobacterium avium subsp. avium ATCC 25291] gi|118165121|gb|ABK66018.1| ABC-transporter integral membrane protein [Mycobacterium avium 104] Length = 280 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 55/208 (26%), Positives = 104/208 (50%), Gaps = 23/208 (11%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V ++ +G VIA QG L G E + L + L +R + ++ + +A G+ Sbjct: 69 VGVAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAG 128 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PL--LTILANFSA------ 278 A++G+M+++EEIDA+ M + V L+S R+ A +I++ PL L++LA F A Sbjct: 129 ATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLIAIVPLYSLSVLAAFFAARFTTV 188 Query: 279 -IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 I G S ++ +Y F++ +++ ++A M+ A+ +V G+ Sbjct: 189 YINGQSKGLYDHY----------FNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGY--NA 236 Query: 338 HSNSLGKKVTTC-VVQSISIVIIIDSLF 364 H +G + V++ IV+++ +LF Sbjct: 237 HGGPVGVGIAVGQAVRTSLIVVVVITLF 264 >gi|30468225|ref|NP_849112.1| ORF251 [Cyanidioschyzon merolae strain 10D] gi|30409325|dbj|BAC76274.1| ycxr [Cyanidioschyzon merolae strain 10D] Length = 251 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 47/207 (22%), Positives = 95/207 (45%) Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 Q+ ++ + + + S G V+ Q A +L A ++ + LRE+ + TA+ Sbjct: 33 QIAWIAEQSLSLCWIHSCFLGMVLCLQLAKELISLQATPMIGAILGLTLLRELSPVFTAI 92 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++ R S+ +E+ SM ++E+ DA+ + ++ I PR A +I LPL T ++ Sbjct: 93 LLTARVASSYTSELASMCVSEQFDALYLLQTHPFQLHIIPRYLACLIMLPLCTWFCFLTS 152 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 + + + Y IP +F + S+ +L +I T L+KA + +++ Sbjct: 153 LSASLFLACLAYGIPVNLFLTSLRSSLSLWDILTSLLKAMIFGALLALISCHYALITRGG 212 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFA 365 S + T VV + +++ D L + Sbjct: 213 SKQIAISTTRAVVHVLVLILAFDWLLS 239 >gi|326382582|ref|ZP_08204273.1| hypothetical protein SCNU_06570 [Gordonia neofelifaecis NRRL B-59395] gi|326198701|gb|EGD55884.1| hypothetical protein SCNU_06570 [Gordonia neofelifaecis NRRL B-59395] Length = 282 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 58/103 (56%), Gaps = 3/103 (2%) Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA + +G L+ G + L + REI LL A +SG A++GSM+I+ Sbjct: 82 GATVGIEGYTALNLLGMSPITGGLSAFATTREIAPLLAATAFTAQSGCRFTAQLGSMRIS 141 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIIS-LPL--LTILANFSA 278 EEIDA+ ++ + + L++ R+ A ++S +PL +++ AN+ A Sbjct: 142 EEIDALESIAIRPLPYLVTTRMAAAVLSIIPLYAISLAANYVA 184 >gi|226364102|ref|YP_002781884.1| YrbE family protein [Rhodococcus opacus B4] gi|226242591|dbj|BAH52939.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 289 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 47/202 (23%), Positives = 97/202 (48%), Gaps = 4/202 (1%) Query: 171 VILISFVTGAV---IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +++IS +T AV + QQGA + + G S + + RE ++ + + G+ Sbjct: 78 LVVISLLTTAVGYEVGQQGATSMGRIGIGALSGFISAFFNTREAIPVIAGIALTATVGAG 137 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 A++G+M+++EEIDA+ TM + + L++ R+ A II++ L +A F + A+ ++ Sbjct: 138 FTAQLGAMRVSEEIDAMETMSIPSLPYLVTTRVTAGIIAVIPLYAVALFVGYV-ATQLVT 196 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 +Y + F+ +++ ++K M+ + V G+ +G V Sbjct: 197 EYLGEASGTYQHYFNVFLVPSDVAWSMVKVLAMSVVVMCVHCYHGYNAKGGPAGVGVAVG 256 Query: 348 TCVVQSISIVIIIDSLFAIFYF 369 V S+ +++ID L I + Sbjct: 257 RAVRTSLIAIMVIDLLVGIAVY 278 >gi|326336634|ref|ZP_08202802.1| ABC superfamily ATP binding cassette transporter permease protein [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691104|gb|EGD33075.1| ABC superfamily ATP binding cassette transporter permease protein [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 273 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 7/104 (6%) Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR----EIGVLLTAVMIA 221 S + ++ IS GAVIA Q A + + L+ + E T++++A Sbjct: 69 SSLGIIAFISLFVGAVIAIQMALNIDN---PLIPKSLIGFATRQTIVLEFAPTFTSIIVA 125 Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 G+ GS I + IG+M++ E+IDA+ MG++ + LI P+I AL++ Sbjct: 126 GKVGSFITSSIGTMRVTEQIDALDIMGVNSLNYLIFPKIIALLL 169 >gi|110348077|gb|ABG72766.1| YrbE1B-HA [Expression vector yrbE1AB] Length = 300 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/103 (35%), Positives = 61/103 (59%), Gaps = 4/103 (3%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V ++ FVT +++A QG L G E F+ +++ +R G ++T V +A G+ Sbjct: 78 VAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVTGVALAATVGAG 137 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL 269 AE+G+M+I+EEIDA+ MG+ + L S RI A L++ +PL Sbjct: 138 ATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180 >gi|260203313|ref|ZP_05770804.1| hypothetical protein MtubK8_03240 [Mycobacterium tuberculosis K85] Length = 298 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 92/178 (51%), Gaps = 13/178 (7%) Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 R+ F + NL + G + ++++ + +++ G+ + ++ L LI Q Sbjct: 17 RARFPRAVANLRQY-GGAAARGLDEA---GQLTWFALTSIGQIAHALRYYRKETLRLIAQ 72 Query: 160 MYYVGVSGVPVV----ILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 + +G + VV ++ FVT +++A QG L G E F+ +++ +R G Sbjct: 73 IG-MGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAG 131 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL 269 ++T V +A G+ AE+G+M+I+EEIDA+ MG+ + L S RI A L++ +PL Sbjct: 132 PVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 189 >gi|167970289|ref|ZP_02552566.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis H37Ra] gi|215406161|ref|ZP_03418342.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis 02_1987] gi|215425375|ref|ZP_03423294.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis T92] gi|215433088|ref|ZP_03431007.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis EAS054] gi|215448447|ref|ZP_03435199.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis T85] gi|218755902|ref|ZP_03534698.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis GM 1503] gi|219555966|ref|ZP_03535042.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis T17] gi|254549107|ref|ZP_05139554.1| hypothetical protein Mtube_01356 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185031|ref|ZP_05762505.1| hypothetical protein MtubCP_03117 [Mycobacterium tuberculosis CPHL_A] gi|260199171|ref|ZP_05766662.1| hypothetical protein MtubT4_03255 [Mycobacterium tuberculosis T46] gi|294994642|ref|ZP_06800333.1| hypothetical protein Mtub2_09022 [Mycobacterium tuberculosis 210] gi|297632646|ref|ZP_06950426.1| hypothetical protein MtubK4_00906 [Mycobacterium tuberculosis KZN 4207] gi|297729621|ref|ZP_06958739.1| hypothetical protein MtubKR_00936 [Mycobacterium tuberculosis KZN R506] gi|313656947|ref|ZP_07813827.1| hypothetical protein MtubKV_00921 [Mycobacterium tuberculosis KZN V2475] Length = 298 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 92/178 (51%), Gaps = 13/178 (7%) Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 R+ F + NL + G + ++++ + +++ G+ + ++ L LI Q Sbjct: 17 RARFPRAVANLRQY-GGAAARGLDEA---GQLTWFALTSIGQIAHALRYYRKETLRLIAQ 72 Query: 160 MYYVGVSGVPVV----ILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 + +G + VV ++ FVT +++A QG L G E F+ +++ +R G Sbjct: 73 IG-MGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAG 131 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL 269 ++T V +A G+ AE+G+M+I+EEIDA+ MG+ + L S RI A L++ +PL Sbjct: 132 PVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 189 >gi|120405065|ref|YP_954894.1| hypothetical protein Mvan_4111 [Mycobacterium vanbaalenii PYR-1] gi|119957883|gb|ABM14888.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 281 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 71/140 (50%), Gaps = 13/140 (9%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +V ++ TG +A QG L G E + L + + +R ++ + +A G+ + Sbjct: 72 IVGFLTLATGGTLAVQGYSSLGDIGIEALTGFLAAFINVRISAPVVAGIGLAATFGAGVT 131 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PLLTILANFS---------AI 279 A++G+M+ NEEIDA+ M + + L+S R+ A ++++ PL ++ S + Sbjct: 132 AQLGAMRTNEEIDALEAMAIRPISFLVSTRLIAGMVAITPLYSVAVILSFLASRYTTVVL 191 Query: 280 IGASIVIWKYYDIPFAVFFS 299 +G S ++ +Y FA F S Sbjct: 192 LGQSAGLYDHY---FATFLS 208 >gi|296165591|ref|ZP_06848116.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899064|gb|EFG78545.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 230 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 46/194 (23%), Positives = 89/194 (45%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 + ++ ++ GA++A + L+ G S + +RE+ L+T V A ++G Sbjct: 19 ISILTILGVTIGAMVAIEAYATLNLIGLGALSGIIGGWGNIREMAPLVTGVAFASQAGCR 78 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + AEIGSM+I +EIDA +MGL + ++ R+ +I + +L A + +VI Sbjct: 79 MTAEIGSMRIADEIDATESMGLRSIPFVVGTRLVGGMICVVPGFLLELMVAFFTSDLVIR 138 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 Y+ P + F + +I LIKA A ++ G+ +G+ Sbjct: 139 VSYNQPAGTYNHYFVQFLSPTDIGYSLIKAIIYCAAATLIHCYYGYFASGGPVGVGQASG 198 Query: 348 TCVVQSISIVIIID 361 + S+ ++++D Sbjct: 199 RAIRASLVTIMVLD 212 >gi|15607309|ref|NP_214682.1| integral membrane protein YRBE1B [Mycobacterium tuberculosis H37Rv] gi|31791346|ref|NP_853839.1| integral membrane protein YRBE1B [Mycobacterium bovis AF2122/97] gi|121636080|ref|YP_976303.1| integral membrane protein YrbE1b [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148659932|ref|YP_001281455.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis H37Ra] gi|148821360|ref|YP_001286114.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis F11] gi|224988553|ref|YP_002643240.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253797090|ref|YP_003030091.1| hypothetical protein TBMG_00169 [Mycobacterium tuberculosis KZN 1435] gi|254233557|ref|ZP_04926883.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis C] gi|254366620|ref|ZP_04982664.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis str. Haarlem] gi|289441543|ref|ZP_06431287.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis T46] gi|289445699|ref|ZP_06435443.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis CPHL_A] gi|289552420|ref|ZP_06441630.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis KZN 605] gi|289568067|ref|ZP_06448294.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis T17] gi|289747935|ref|ZP_06507313.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis 02_1987] gi|289748644|ref|ZP_06508022.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis T92] gi|289756233|ref|ZP_06515611.1| integral membrane protein [Mycobacterium tuberculosis EAS054] gi|289760270|ref|ZP_06519648.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|289764284|ref|ZP_06523662.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis GM 1503] gi|306774258|ref|ZP_07412595.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu001] gi|306782790|ref|ZP_07421112.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu003] gi|306801753|ref|ZP_07438421.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu008] gi|307082301|ref|ZP_07491471.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu011] gi|308369322|ref|ZP_07417339.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu002] gi|308371608|ref|ZP_07425479.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu004] gi|308372825|ref|ZP_07430015.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu005] gi|308373908|ref|ZP_07434059.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu006] gi|308375089|ref|ZP_07442632.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu007] gi|308378565|ref|ZP_07483021.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu009] gi|308379713|ref|ZP_07487253.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu010] gi|308394823|ref|ZP_07491759.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu012] gi|2213505|emb|CAB09751.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE1B [Mycobacterium tuberculosis H37Rv] gi|31616931|emb|CAD93038.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE1B [Mycobacterium bovis AF2122/97] gi|121491727|emb|CAL70189.1| Conserved hypothetical integral membrane protein yrbE1B [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124603350|gb|EAY61625.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis C] gi|134152132|gb|EBA44177.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis str. Haarlem] gi|148504084|gb|ABQ71893.1| conserved hypothetical integral membrane protein YrbE1b [Mycobacterium tuberculosis H37Ra] gi|148719887|gb|ABR04512.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis F11] gi|224771666|dbj|BAH24472.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253318593|gb|ACT23196.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis KZN 1435] gi|289414462|gb|EFD11702.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis T46] gi|289418657|gb|EFD15858.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis CPHL_A] gi|289437052|gb|EFD19545.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis KZN 605] gi|289541820|gb|EFD45469.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis T17] gi|289688463|gb|EFD55951.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis 02_1987] gi|289689231|gb|EFD56660.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis T92] gi|289696820|gb|EFD64249.1| integral membrane protein [Mycobacterium tuberculosis EAS054] gi|289711790|gb|EFD75806.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis GM 1503] gi|289715834|gb|EFD79846.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|308217092|gb|EFO76491.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu001] gi|308328030|gb|EFP16881.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu002] gi|308332310|gb|EFP21161.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu003] gi|308336192|gb|EFP25043.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu004] gi|308339692|gb|EFP28543.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu005] gi|308343699|gb|EFP32550.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu006] gi|308347572|gb|EFP36423.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu007] gi|308351471|gb|EFP40322.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu008] gi|308352198|gb|EFP41049.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu009] gi|308356147|gb|EFP44998.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu010] gi|308360102|gb|EFP48953.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu011] gi|308367650|gb|EFP56501.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu012] gi|323717157|gb|EGB26366.1| hypothetical protein TMMG_00597 [Mycobacterium tuberculosis CDC1551A] gi|326905925|gb|EGE52858.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis W-148] gi|328456877|gb|AEB02300.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis KZN 4207] gi|328864230|gb|AEB53198.1| conserved integral membrane protein YRBE1B [Mycobacterium tuberculosis] Length = 289 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/103 (35%), Positives = 61/103 (59%), Gaps = 4/103 (3%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V ++ FVT +++A QG L G E F+ +++ +R G ++T V +A G+ Sbjct: 78 VAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVTGVALAATVGAG 137 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL 269 AE+G+M+I+EEIDA+ MG+ + L S RI A L++ +PL Sbjct: 138 ATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180 >gi|298527560|ref|ZP_07014969.1| YrbE1B-HA [Mycobacterium tuberculosis 94_M4241A] gi|298497354|gb|EFI32648.1| YrbE1B-HA [Mycobacterium tuberculosis 94_M4241A] Length = 289 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/103 (35%), Positives = 61/103 (59%), Gaps = 4/103 (3%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V ++ FVT +++A QG L G E F+ +++ +R G ++T V +A G+ Sbjct: 78 VAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVTGVALAATVGAG 137 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL 269 AE+G+M+I+EEIDA+ MG+ + L S RI A L++ +PL Sbjct: 138 ATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180 >gi|289572748|ref|ZP_06452975.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis K85] gi|289537179|gb|EFD41757.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis K85] Length = 289 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/103 (35%), Positives = 61/103 (59%), Gaps = 4/103 (3%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V ++ FVT +++A QG L G E F+ +++ +R G ++T V +A G+ Sbjct: 78 VAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVTGVALAATVGAG 137 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL 269 AE+G+M+I+EEIDA+ MG+ + L S RI A L++ +PL Sbjct: 138 ATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 180 >gi|215414033|ref|ZP_03422692.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis 94_M4241A] Length = 298 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/103 (35%), Positives = 61/103 (59%), Gaps = 4/103 (3%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V ++ FVT +++A QG L G E F+ +++ +R G ++T V +A G+ Sbjct: 87 VAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVTGVALAATVGAG 146 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL 269 AE+G+M+I+EEIDA+ MG+ + L S RI A L++ +PL Sbjct: 147 ATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPL 189 >gi|226349636|ref|YP_002776750.1| putative YrbE family protein [Rhodococcus opacus B4] gi|226245551|dbj|BAH55898.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 304 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 60/106 (56%), Gaps = 4/106 (3%) Query: 171 VILISFVTGAV---IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +++IS +T AV + QQGA L + G S + + RE + + + G+ Sbjct: 92 LMVISLLTAAVGYEVGQQGATSLGRVGIGALSGFISAFFNTREAIPAIAGIALTATVGAG 151 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTI 272 A++G+M+++EEIDA+ TM + + L++ R+ A +I+ +PL ++ Sbjct: 152 FTAQLGAMRVSEEIDAMETMSIPSLPYLVTTRVMAGVIAVIPLYSV 197 >gi|118467231|ref|YP_881722.1| TrnB1 protein [Mycobacterium avium 104] gi|118168518|gb|ABK69415.1| TrnB1 protein [Mycobacterium avium 104] Length = 261 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 74/151 (49%) Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 IG + T +++AG +AI A++G+ I EE+DA+R MG++ V+ L+ PR+ AL ++ LL Sbjct: 99 IGPITTVLVVAGTGATAICADLGARTIREELDAMRVMGINPVQRLLVPRVLALCLNGLLL 158 Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330 + ++G+ + + + + +A++ KA G +A Sbjct: 159 NSINTIVGLVGSFFFSVYFQHVTPGAWAASLTLLVKIADVAIAFFKAALFGLVAGTIACY 218 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 +G VG +G V VV + + +I+ Sbjct: 219 KGVTVGGGPQGVGNAVNETVVYTFMALFVIN 249 >gi|89891419|ref|ZP_01202925.1| putative ABC transporter [Flavobacteria bacterium BBFL7] gi|89516450|gb|EAS19111.1| putative ABC transporter [Flavobacteria bacterium BBFL7] Length = 246 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 8/113 (7%) Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ----LREIGVLLTAVMIAGRSGSAIV 229 IS GAV+A Q A L + L+ + E +V++AG+ GS I Sbjct: 49 ISLFMGAVVALQTALNLDN---PLIPKSLIGFATRQSIILEFAPTFISVIMAGKVGSYIT 105 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 + IG+M++ E+IDA+ MG++ + LI P+I AL+ P L + F I G Sbjct: 106 SSIGTMRVTEQIDALEVMGINPLNYLIYPKIIALLFY-PFLIAIIMFVGIFGG 157 >gi|254819936|ref|ZP_05224937.1| TrnB1 protein [Mycobacterium intracellulare ATCC 13950] Length = 262 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 74/151 (49%) Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 IG + T +++AG +AI A++G+ I EE+DA+R MG++ V+ L+ PR+ AL ++ LL Sbjct: 100 IGPITTVLVVAGTGATAICADLGARTIREELDAMRVMGINPVQRLLVPRVLALCLNGLLL 159 Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330 + ++G+ + + + + +A++ KA G +A Sbjct: 160 NSINTIVGLVGSFFFSVYFQHVTPGAWAASLTLLVKIADVAIAFFKAALFGLVAGTIACY 219 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 +G VG +G V VV + + +I+ Sbjct: 220 KGVTVGGGPQGVGNAVNETVVYTFMALFVIN 250 >gi|218463600|ref|ZP_03503691.1| probable ABC transporter, permease protein [Rhizobium etli Kim 5] Length = 191 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 87/179 (48%), Gaps = 19/179 (10%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG-- 67 R +GNW+S + + D +++ +S VDLS IT+IDT G L+ ++ Sbjct: 25 RLSGNWRSAYVHLVLRDFEKLLHQ--KSGDLTVDLSDITDIDTAGIWLLCRLKKEAEAAG 82 Query: 68 -KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 ++ +G + HI+++ ++ S K + + S + IGK ++ Sbjct: 83 RTVRFEGTNPHIDEMLAMFSEEPAKPEPEPREKISLA----ARILAPIGKMTYDVWDNLA 138 Query: 127 SQAHILGLVISNTGEFCASSYKF-KGFLLS---LIRQMYYVGVSGVPVVILISFVTGAV 181 + +ILG + + KF +G +S ++ Q+ ++GV VP+++L+SF+ GA+ Sbjct: 139 AAMYILGSAVR------GAQMKFGRGSGVSPASIVNQIDHMGVRAVPIILLMSFLIGAI 191 >gi|226306858|ref|YP_002766818.1| YrbE family protein [Rhodococcus erythropolis PR4] gi|226185975|dbj|BAH34079.1| putative YrbE family protein [Rhodococcus erythropolis PR4] Length = 257 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 26/205 (12%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 VP +L+SF ++ + GA LS GA + ++ ++G ++T +++AG +A Sbjct: 59 VPFTVLVSFTLNILLREIGAADLSGAGAALGAVT--------QVGPVVTVLIVAGAGATA 110 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++GS I EEIDA+ +G+D + L+ PR+ A + LL L I G Sbjct: 111 IAADLGSRTIREEIDAMEVLGIDPINRLVIPRVVASTVVALLLNGLVCVIGIAGGY---- 166 Query: 288 KYYDIPFAVFFSRFHSTATLANI--FTGL-------IKAPFMACAIGIVAMKEGFAVGVH 338 F+VF + A + I TGL +KA G+VA G +V Sbjct: 167 -----AFSVFLQGVNPGAFVEGITLLTGLPEVALSMVKAALFGMLAGLVACYRGLSVRGG 221 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSL 363 +G+ V VV + + +++++ Sbjct: 222 PKGVGEAVNETVVYAFMALFVVNTI 246 >gi|326799081|ref|YP_004316900.1| hypothetical protein Sph21_1668 [Sphingobacterium sp. 21] gi|326549845|gb|ADZ78230.1| protein of unknown function DUF140 [Sphingobacterium sp. 21] Length = 244 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 23/141 (16%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM------------ 203 ++ +M +GV + ++ +IS GAV+ Q AFQL DL+ Sbjct: 30 IMHEMNSIGVGSLGLIAIISTFIGAVMTMQIAFQLVS--------DLIPNSIIGQINRDS 81 Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263 SIL+L ++A+++AG+ GS+I ++IGSM++ E+IDA+ MG++ LI P+I A Sbjct: 82 SILELSPT---ISALVLAGKVGSSISSQIGSMRVTEQIDALEIMGINAPGYLILPKILAG 138 Query: 264 IISLPLLTILANFSAIIGASI 284 I +P+L IL+ F A+ G I Sbjct: 139 ITMVPVLVILSIFLALSGGLI 159 >gi|325286981|ref|YP_004262771.1| hypothetical protein Celly_2079 [Cellulophaga lytica DSM 7489] gi|324322435|gb|ADY29900.1| protein of unknown function DUF140 [Cellulophaga lytica DSM 7489] Length = 260 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 E T++++AG+ GS I + IG+M++ E+IDA+ MG++ + L+ P+I AL++ P Sbjct: 101 EFAPTFTSIIMAGKVGSYITSSIGTMRVTEQIDALEVMGVNSLNYLVFPKIIALLL-YPF 159 Query: 270 LTILANFSAIIGASI 284 +A + I G I Sbjct: 160 AIAIAMYVGIFGGWI 174 >gi|118467326|ref|YP_879397.1| ABC transporter transmembrane protein [Mycobacterium avium 104] gi|254773147|ref|ZP_05214663.1| ABC-transporter integral membrane protein [Mycobacterium avium subsp. avium ATCC 25291] gi|118168613|gb|ABK69510.1| ABC-transporter integral membrane protein [Mycobacterium avium 104] Length = 285 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 64/107 (59%), Gaps = 3/107 (2%) Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G +GV VV+ F GA++A +G L+ G + + S++ RE+ ++ ++ A + Sbjct: 72 GTAGVAVVL--GFTAGALVAVEGYNFLNLLGLGPATGIISSLVNTRELAPIMASLAFAMQ 129 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPL 269 +G A++G+M+I EEIDA+ ++ + + L++ R+ A +I+ +PL Sbjct: 130 AGCRFTAQLGAMRIAEEIDALESLAIRPIPFLVTTRLMASVIAVIPL 176 >gi|325003317|ref|ZP_08124429.1| integral membrane protein yrbe4b [Pseudonocardia sp. P1] Length = 280 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 60/108 (55%), Gaps = 3/108 (2%) Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 +S G+++ QG L G E + + + R I L+ A + G+ A++G Sbjct: 75 LSLFVGSLVGLQGFRALDALGVEALTGFITAYFNTRSIAPLVAASALTATLGAGFTAQLG 134 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLT--ILANFSA 278 +M+I+EEIDA+ M + V L++ R+ A I++ +P+ T +LA+++A Sbjct: 135 AMRISEEIDALEVMAVPSVPYLVTTRVIAGIVAIIPIYTLGLLASYAA 182 >gi|254818556|ref|ZP_05223557.1| ABC-transporter integral membrane protein [Mycobacterium intracellulare ATCC 13950] Length = 285 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 64/107 (59%), Gaps = 3/107 (2%) Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G +GV VV+ F GA++A +G L+ G + + S++ RE+ ++ ++ A + Sbjct: 72 GTAGVAVVL--GFTAGALVAVEGYNFLNLLGLGPATGIISSLVNTRELAPIMASLAFAMQ 129 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPL 269 +G A++G+M+I EEIDA+ ++ + + L++ R+ A +I+ +PL Sbjct: 130 AGCRFTAQLGAMRIAEEIDALESLAIRPIPFLVTTRLMASVIAVIPL 176 >gi|226361937|ref|YP_002779715.1| YrbE family protein [Rhodococcus opacus B4] gi|226240422|dbj|BAH50770.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 286 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 47/197 (23%), Positives = 98/197 (49%), Gaps = 9/197 (4%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V+++ F+T G ++A QG L G E + + + +R + +++ + +A G+ Sbjct: 75 VVIVGFMTLSGGTLLAIQGFSSLGNIGVEALTGFFAAFINVRIVAPVISGIALAATIGAG 134 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 A++G+M+I+EEIDA+ MG+ + L+S R+ A +IS+ L +A + + + Sbjct: 135 ATAQLGAMRISEEIDALEVMGIRSMSYLVSTRLIAGMISIVPLYSMAVIMSFVASQFTTT 194 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF-----AVGVHSNSL 342 Y V+ F + ++F ++A MA + ++ G+ GV ++ Sbjct: 195 YVYGQSSGVYDHYFTTFLRPTDLFWSFLQAVVMALVVMLIHCYYGYHARGGPAGV-GEAV 253 Query: 343 GKKVTTCVVQSISIVII 359 G+ V T ++ +S+ +I Sbjct: 254 GRAVRTSLIAVVSVTLI 270 >gi|319952306|ref|YP_004163573.1| hypothetical protein Celal_0740 [Cellulophaga algicola DSM 14237] gi|319420966|gb|ADV48075.1| protein of unknown function DUF140 [Cellulophaga algicola DSM 14237] Length = 245 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 E T++++AG+ GS I + IG+M++ E+IDA+ MG++ + L+ P+I AL++ P Sbjct: 86 EFAPTFTSIIMAGKVGSYITSSIGTMRVTEQIDALEVMGVNSLNYLVFPKIVALLL-YPF 144 Query: 270 LTILANFSAIIGASI 284 +A + I G I Sbjct: 145 AIAIAMYVGIFGGWI 159 >gi|229492731|ref|ZP_04386532.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229320390|gb|EEN86210.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length = 257 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 26/205 (12%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 VP +L+SF ++ + GA LS GA + ++ ++G ++T +++AG +A Sbjct: 59 VPFTVLVSFTLNILLREIGAADLSGAGAALGAVT--------QVGPVVTVLIVAGAGATA 110 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++GS I EEIDA+ +G+D + L+ PR+ A + LL L I G Sbjct: 111 IAADLGSRTIREEIDAMEVLGIDPITRLVIPRVVASTVVALLLNGLVCVIGIAGGY---- 166 Query: 288 KYYDIPFAVFFSRFHSTATLANI--FTGL-------IKAPFMACAIGIVAMKEGFAVGVH 338 F+VF + A + I TGL +KA G+VA G +V Sbjct: 167 -----AFSVFLQGVNPGAFVEGITLLTGLPEVALSMVKAALFGMLAGLVACYRGLSVRGG 221 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSL 363 +G+ V VV + + +++++ Sbjct: 222 PKGVGEAVNETVVYAFMALFVVNTI 246 >gi|324999496|ref|ZP_08120608.1| hypothetical protein PseP1_12046 [Pseudonocardia sp. P1] Length = 285 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 4/99 (4%) Query: 180 AVIAQQ----GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 AV+A Q G F + G ++ + S+ +R + ++ ++A + G IVAE+GSM Sbjct: 81 AVLALQSGVGGHFIFANPGINSYAGAIYSVALMRGLVEVIFGWIVAAKIGCGIVAEMGSM 140 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +INEE+DA+ MGL L R+ A ++ LP L + A Sbjct: 141 RINEEVDALDVMGLRSRAYLAGTRVAAAMLVLPFLFVTA 179 >gi|260188552|ref|ZP_05766026.1| hypothetical protein MtubCP_21372 [Mycobacterium tuberculosis CPHL_A] gi|289449202|ref|ZP_06438946.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis CPHL_A] gi|289422160|gb|EFD19361.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis CPHL_A] Length = 280 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 3/114 (2%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V ++ +G VIA QG L G E + L + L +R + ++ + +A G+ Sbjct: 69 VGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAG 128 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL--LTILANFSA 278 A++G+M+++EEIDA+ M + V L+S R+ A L+ +PL L++LA F A Sbjct: 129 ATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFA 182 >gi|15610636|ref|NP_218017.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis H37Rv] gi|15843112|ref|NP_338149.1| hypothetical protein MT3604 [Mycobacterium tuberculosis CDC1551] gi|31794676|ref|NP_857169.1| integral membrane protein YrbE4b [Mycobacterium bovis AF2122/97] gi|121639419|ref|YP_979643.1| integral membrane protein YrbE4b [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148663364|ref|YP_001284887.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis H37Ra] gi|148824707|ref|YP_001289461.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis F11] gi|215405541|ref|ZP_03417722.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis 02_1987] gi|215413413|ref|ZP_03422097.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis 94_M4241A] gi|215429006|ref|ZP_03426925.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis T92] gi|215432468|ref|ZP_03430387.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis EAS054] gi|215447833|ref|ZP_03434585.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis T85] gi|218755277|ref|ZP_03534073.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis GM 1503] gi|224991915|ref|YP_002646604.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253800542|ref|YP_003033543.1| hypothetical protein TBMG_03545 [Mycobacterium tuberculosis KZN 1435] gi|254234086|ref|ZP_04927411.1| hypothetical integral membrane protein yrbE4B [Mycobacterium tuberculosis C] gi|254366846|ref|ZP_04982887.1| hypothetical integral membrane protein yrbE4B [Mycobacterium tuberculosis str. Haarlem] gi|254552602|ref|ZP_05143049.1| hypothetical protein Mtube_19500 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260206867|ref|ZP_05774358.1| hypothetical protein MtubK8_21501 [Mycobacterium tuberculosis K85] gi|289555766|ref|ZP_06444976.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis KZN 605] gi|289576234|ref|ZP_06456461.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis K85] gi|289747336|ref|ZP_06506714.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis 02_1987] gi|289752221|ref|ZP_06511599.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis T92] gi|289755630|ref|ZP_06515008.1| integral membrane protein [Mycobacterium tuberculosis EAS054] gi|289759659|ref|ZP_06519037.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|289763680|ref|ZP_06523058.1| hypothetical integral membrane protein yrbE4B [Mycobacterium tuberculosis GM 1503] gi|294995730|ref|ZP_06801421.1| hypothetical protein Mtub2_14798 [Mycobacterium tuberculosis 210] gi|297636156|ref|ZP_06953936.1| hypothetical protein MtubK4_18620 [Mycobacterium tuberculosis KZN 4207] gi|297733156|ref|ZP_06962274.1| hypothetical protein MtubKR_18790 [Mycobacterium tuberculosis KZN R506] gi|298526980|ref|ZP_07014389.1| ABC-transporter integral membrane protein [Mycobacterium tuberculosis 94_M4241A] gi|306777850|ref|ZP_07416187.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu001] gi|306782581|ref|ZP_07420918.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu002] gi|306786399|ref|ZP_07424721.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu003] gi|306790768|ref|ZP_07429090.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu004] gi|306795298|ref|ZP_07433600.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu005] gi|306799486|ref|ZP_07437788.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu006] gi|306805332|ref|ZP_07442000.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu008] gi|306809518|ref|ZP_07446186.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu007] gi|306969625|ref|ZP_07482286.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu009] gi|306973968|ref|ZP_07486629.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu010] gi|307081676|ref|ZP_07490846.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu011] gi|307086284|ref|ZP_07495397.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu012] gi|313660487|ref|ZP_07817367.1| hypothetical protein MtubKV_18785 [Mycobacterium tuberculosis KZN V2475] gi|2924437|emb|CAA17737.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE4B [Mycobacterium tuberculosis H37Rv] gi|13883458|gb|AAK47963.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|31620273|emb|CAD95716.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE4B [Mycobacterium bovis AF2122/97] gi|121495067|emb|CAL73553.1| Conserved hypothetical integral membrane protein yrbE4B [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124599615|gb|EAY58719.1| hypothetical integral membrane protein yrbE4B [Mycobacterium tuberculosis C] gi|134152355|gb|EBA44400.1| hypothetical integral membrane protein yrbE4B [Mycobacterium tuberculosis str. Haarlem] gi|148507516|gb|ABQ75325.1| conserved hypothetical integral membrane protein YrbE4b [Mycobacterium tuberculosis H37Ra] gi|148723234|gb|ABR07859.1| hypothetical integral membrane protein yrbE4B [Mycobacterium tuberculosis F11] gi|224775030|dbj|BAH27836.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253322045|gb|ACT26648.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis KZN 1435] gi|289440398|gb|EFD22891.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis KZN 605] gi|289540665|gb|EFD45243.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis K85] gi|289687864|gb|EFD55352.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis 02_1987] gi|289692808|gb|EFD60237.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis T92] gi|289696217|gb|EFD63646.1| integral membrane protein [Mycobacterium tuberculosis EAS054] gi|289711186|gb|EFD75202.1| hypothetical integral membrane protein yrbE4B [Mycobacterium tuberculosis GM 1503] gi|289715223|gb|EFD79235.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|298496774|gb|EFI32068.1| ABC-transporter integral membrane protein [Mycobacterium tuberculosis 94_M4241A] gi|308213830|gb|EFO73229.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu001] gi|308324771|gb|EFP13622.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu002] gi|308329035|gb|EFP17886.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu003] gi|308332874|gb|EFP21725.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu004] gi|308336457|gb|EFP25308.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu005] gi|308340335|gb|EFP29186.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu006] gi|308344190|gb|EFP33041.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu007] gi|308348120|gb|EFP36971.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu008] gi|308352884|gb|EFP41735.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu009] gi|308356697|gb|EFP45548.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu010] gi|308360651|gb|EFP49502.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu011] gi|308364268|gb|EFP53119.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu012] gi|323717842|gb|EGB27033.1| hypothetical protein TMMG_03674 [Mycobacterium tuberculosis CDC1551A] gi|326905342|gb|EGE52275.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis W-148] gi|328460273|gb|AEB05696.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis KZN 4207] gi|328864232|gb|AEB53199.1| conserved integral membrane protein YRBE4B [Mycobacterium tuberculosis] Length = 280 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 3/114 (2%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V ++ +G VIA QG L G E + L + L +R + ++ + +A G+ Sbjct: 69 VGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAG 128 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL--LTILANFSA 278 A++G+M+++EEIDA+ M + V L+S R+ A L+ +PL L++LA F A Sbjct: 129 ATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFA 182 >gi|163754162|ref|ZP_02161285.1| hypothetical protein KAOT1_21107 [Kordia algicida OT-1] gi|161326376|gb|EDP97702.1| hypothetical protein KAOT1_21107 [Kordia algicida OT-1] Length = 233 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 61/114 (53%), Gaps = 2/114 (1%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ-LREIGVLLTAVMIAGRSGSAI 228 +V ISF G V++ Q A ++ + + + + E ++++AG+ GS I Sbjct: 33 IVCFISFFVGGVVSIQTALNMNNPLIPKYLVGFATRQSVILEFAPTFISIIMAGKVGSFI 92 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 + IG+M++ E+IDA+ MG++ + L+ P+I AL + P + +A F I G Sbjct: 93 TSSIGTMRVTEQIDALEVMGVNSLNYLVFPKIIALSL-YPFVITIAMFLGIFGG 145 >gi|86143923|ref|ZP_01062291.1| hypothetical protein MED217_03715 [Leeuwenhoekiella blandensis MED217] gi|85829630|gb|EAQ48093.1| hypothetical protein MED217_03715 [Leeuwenhoekiella blandensis MED217] Length = 245 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 8/117 (6%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ----LREIGVLLTAVMIAGRSG 225 +V ISF G V+A Q A + I L+ + E ++++AG+ Sbjct: 45 IVCFISFFVGGVVAIQTALNMDN---PILPKSLIGFASRQSIILEFAPTFISIIMAGKVS 101 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 S I + IG+M++ E+IDA+ MG++ + L+ P+I A++ P + +A F I+G Sbjct: 102 SFITSSIGTMRVTEQIDALEVMGINSLNYLVFPKIIAMLF-YPFVIAIAMFLGILGG 157 >gi|85860837|ref|YP_463039.1| ABC transporter permease [Syntrophus aciditrophicus SB] gi|85723928|gb|ABC78871.1| ABC transporter permease protein [Syntrophus aciditrophicus SB] Length = 269 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 33/115 (28%), Positives = 60/115 (52%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 ++ Q+Y+ V +P+ I IS + G + + G + +++ + E+ + Sbjct: 55 IVTQLYFTAVQILPLFISISVILGLFLMGIVFESIKNLGMTGYLGNILMGFIVTELCPFM 114 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 T +M+A RSG+AI EI MK+N+E DA+ +D + PRI ++S+ LL Sbjct: 115 TVLMLALRSGAAINTEIAVMKVNKEFDALSVFNIDIFDYIYVPRILNGVVSVVLL 169 >gi|118618293|ref|YP_906625.1| integral membrane protein, Yrb3B [Mycobacterium ulcerans Agy99] gi|118570403|gb|ABL05154.1| conserved hypothetical integral membrane protein, Yrb3B [Mycobacterium ulcerans Agy99] Length = 230 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 1/106 (0%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V +V + TGA++A QG Q + G E + + REI V +A G+ Sbjct: 19 VVIVGFLGMTTGAIVAVQGYNQFASVGVEALTGFASAFFNAREIQPGTVMVALAATVGAG 78 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPLLTI 272 A++G+M+INEEIDA+ +G+ V L S R+ A +++++PL + Sbjct: 79 ATAQLGAMRINEEIDALEVIGIRSVSYLASTRVLAGVVVAIPLFCV 124 >gi|262203810|ref|YP_003275018.1| hypothetical protein Gbro_3951 [Gordonia bronchialis DSM 43247] gi|262087157|gb|ACY23125.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247] Length = 283 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 84/166 (50%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V VV ++ TG IA QG L+ G E + + + +R +++ + +A G+ Sbjct: 72 VVVVGFLTLFTGGTIAVQGYSSLANIGVEALTGFFSAFINVRIAVPVISGIALAATIGAG 131 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 A++G+M+++EEIDA+ TM + + L+S RI A +I++ L LA+ ++ + + Sbjct: 132 ATAQLGAMRVSEEIDALETMAISSIPYLVSTRIVAGLIAIIPLYALASLASFLASRFATV 191 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 Y V+ F + ++I ++A MA A+ ++ GF Sbjct: 192 FIYGQSPGVYDHYFDTFLIPSDILWSFVQAICMAVAVMLIHTYYGF 237 >gi|291446775|ref|ZP_06586165.1| ABC-transporter integral membrane protein [Streptomyces roseosporus NRRL 15998] gi|291349722|gb|EFE76626.1| ABC-transporter integral membrane protein [Streptomyces roseosporus NRRL 15998] Length = 113 Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 30/98 (30%), Positives = 51/98 (52%) Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 +I+G GSAI A++GS KI EE+DA+ MG+ ++ L+ PR+ A ++ LL L + Sbjct: 16 VISGAPGSAICADLGSRKIREELDAMEVMGVSPIQRLVVPRVLATMLVAVLLNGLISVVG 75 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316 +G D + + F + A L +++ K Sbjct: 76 TLGGYFFNVIMQDGTPGAYLASFSALAQLPDLYISEFK 113 >gi|226306857|ref|YP_002766817.1| YrbE family protein [Rhodococcus erythropolis PR4] gi|229492717|ref|ZP_04386518.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] gi|226185974|dbj|BAH34078.1| putative YrbE family protein [Rhodococcus erythropolis PR4] gi|229320376|gb|EEN86196.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] Length = 290 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 1/106 (0%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V VV ++ +G IA QG L G E + + + +R ++ + ++ G+ Sbjct: 79 VAVVGFLTLASGGTIAIQGFSSLGNIGVEALTGFFSAFINVRIAAPVIAGIGLSATIGAG 138 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTI 272 A+IG+M+I+EEIDA+ +M + V ++S R+ A +I+ LPL ++ Sbjct: 139 STAQIGAMRISEEIDALESMAISSVPYVVSTRVTAGMIAILPLYSL 184 >gi|296165084|ref|ZP_06847637.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899577|gb|EFG79030.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 289 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 43/142 (30%), Positives = 78/142 (54%), Gaps = 9/142 (6%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV----ILISFVT---GAVIAQQGAF 188 +S G+ + ++++ LL ++ QM +G + VV ++ F+T G+++A QG Sbjct: 40 LSAIGQIPFAVHRYRKELLRMVAQMG-MGTGAMAVVGGTAAIVGFITLSAGSLVAIQGYA 98 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L G E F+ L +++ +R + + +A G+ AE+G+M+I+EEIDA+ M Sbjct: 99 TLGNIGVEAFTGFLAALVNVRFVAPVAAGQALAATVGAGATAELGAMRISEEIDALEVMS 158 Query: 249 LDFVRILISPRIWA-LIISLPL 269 + V L S R+ A LI+ +PL Sbjct: 159 IRSVPFLASTRVVAGLIVIIPL 180 >gi|289756667|ref|ZP_06516045.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|289712231|gb|EFD76243.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|326902420|gb|EGE49353.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis W-148] Length = 295 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 4/106 (3%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V +I FVT G++IA QG L G E F+ ++ R +++ V +A G+ Sbjct: 84 VAIIGFVTLSGGSLIAIQGFASLGNIGVETFTGFFAALANTRVAAPIVSGVALAATVGAG 143 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRI-WALIISLPLLTI 272 A++G+M+I+EEIDA+ MG+ + L+S RI L++ +PL + Sbjct: 144 ATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYAL 189 >gi|215444701|ref|ZP_03431453.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis T85] gi|294996100|ref|ZP_06801791.1| hypothetical protein Mtub2_16770 [Mycobacterium tuberculosis 210] Length = 246 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 36/103 (34%), Positives = 59/103 (57%), Gaps = 4/103 (3%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V +I FVT G++IA QG L G E F+ ++ R +++ V +A G+ Sbjct: 35 VAIIGFVTLSGGSLIAIQGFASLGNIGVETFTGFFAALANTRVAAPIVSGVALAATVGAG 94 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRI-WALIISLPL 269 A++G+M+I+EEIDA+ MG+ + L+S RI L++ +PL Sbjct: 95 ATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPL 137 >gi|226361227|ref|YP_002779005.1| YrbE family protein [Rhodococcus opacus B4] gi|226239712|dbj|BAH50060.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 302 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 60/124 (48%) Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 ++G+ I EEI+AIR MG+D V+ L+ PR A+I P+L I+ + + ++ Sbjct: 156 DLGARAIREEIEAIRVMGIDPVQRLVVPRFIAMIAIAPMLCIVIVAAGVAAGLVISANVN 215 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 D+ F+ F S AT ++ ++K+ A + ++A G + V V Sbjct: 216 DVVPGSFWQSFGSFATPTDLVFSVLKSVIFAALVVLIASLRGLEAKGGPKGVANAVNASV 275 Query: 351 VQSI 354 V S+ Sbjct: 276 VLSV 279 >gi|126432720|ref|YP_001068411.1| hypothetical protein Mjls_0107 [Mycobacterium sp. JLS] gi|126232520|gb|ABN95920.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 297 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 47/160 (29%), Positives = 84/160 (52%), Gaps = 11/160 (6%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV----VILISFVT---G 179 S H+ V++ G + ++ +L LI ++ +G + V V ++ FVT G Sbjct: 39 SVGHVAWFVVTAVGSIGHALRYYRKEVLRLIAEIG-MGTGAMAVIGGTVAIVGFVTLSGG 97 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 ++IA QG L G E F+ +++ +R +++ +A G+ AE+G+M+I+E Sbjct: 98 SLIAIQGFASLGNIGVEAFTGFFAALVNVRIAAPVVSGQALAATVGAGATAELGAMRISE 157 Query: 240 EIDAIRTMGLDFVRILISPRIWA---LIISLPLLTILANF 276 EIDA+ MG+ + L+S RI A +II L + I+ +F Sbjct: 158 EIDALEVMGIKSISYLVSTRIMAGFIVIIPLYAMAIIMSF 197 >gi|289441977|ref|ZP_06431721.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis T46] gi|289568521|ref|ZP_06448748.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis T17] gi|289749085|ref|ZP_06508463.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis T92] gi|289414896|gb|EFD12136.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis T46] gi|289542275|gb|EFD45923.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis T17] gi|289689672|gb|EFD57101.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis T92] Length = 295 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 4/106 (3%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V +I FVT G++IA QG L G E F+ ++ R +++ V +A G+ Sbjct: 84 VAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIVSGVALAATVGAG 143 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRI-WALIISLPLLTI 272 A++G+M+I+EEIDA+ MG+ + L+S RI L++ +PL + Sbjct: 144 ATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYAL 189 >gi|228473179|ref|ZP_04057934.1| conserved hypothetical protein [Capnocytophaga gingivalis ATCC 33624] gi|228275329|gb|EEK14121.1| conserved hypothetical protein [Capnocytophaga gingivalis ATCC 33624] Length = 245 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 7/100 (7%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR----EIGVLLTAVMIAGRSG 225 ++ IS GAVIA Q A + + L+ + E T++++AG+ G Sbjct: 45 IIAFISLFVGAVIAIQMALNIDN---PLIPKSLIGFATRQTIVLEFAPTFTSIIVAGKVG 101 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 S I + IG+M++ E+IDA+ MG++ + LI P+I AL++ Sbjct: 102 SFITSSIGTMRVTEQIDALDIMGVNSLNYLIFPKIIALLL 141 >gi|108797097|ref|YP_637294.1| hypothetical protein Mmcs_0117 [Mycobacterium sp. MCS] gi|119866182|ref|YP_936134.1| hypothetical protein Mkms_0126 [Mycobacterium sp. KMS] gi|108767516|gb|ABG06238.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119692271|gb|ABL89344.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] Length = 296 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 47/160 (29%), Positives = 84/160 (52%), Gaps = 11/160 (6%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV----VILISFVT---G 179 S H+ V++ G + ++ +L LI ++ +G + V V ++ FVT G Sbjct: 38 SVGHVAWFVVTAVGSIGHALRYYRKEVLRLIAEIG-MGTGAMAVIGGTVAIVGFVTLSGG 96 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 ++IA QG L G E F+ +++ +R +++ +A G+ AE+G+M+I+E Sbjct: 97 SLIAIQGFASLGNIGVEAFTGFFAALVNVRIAAPVVSGQALAATVGAGATAELGAMRISE 156 Query: 240 EIDAIRTMGLDFVRILISPRIWA---LIISLPLLTILANF 276 EIDA+ MG+ + L+S RI A +II L + I+ +F Sbjct: 157 EIDALEVMGIKSISYLVSTRIMAGFIVIIPLYAMAIIMSF 196 >gi|15607728|ref|NP_215102.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis H37Rv] gi|31791770|ref|NP_854263.1| integral membrane protein YrbE2b [Mycobacterium bovis AF2122/97] gi|121636506|ref|YP_976729.1| integral membrane protein YrbE2b [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660357|ref|YP_001281880.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis H37Ra] gi|148821790|ref|YP_001286544.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis F11] gi|224988978|ref|YP_002643665.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253797522|ref|YP_003030523.1| hypothetical protein TBMG_00595 [Mycobacterium tuberculosis KZN 1435] gi|289446141|ref|ZP_06435885.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis CPHL_A] gi|289573188|ref|ZP_06453415.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis K85] gi|289744302|ref|ZP_06503680.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis 02_1987] gi|289760707|ref|ZP_06520085.1| hypothetical integral membrane protein yrbE2B [Mycobacterium tuberculosis GM 1503] gi|298524075|ref|ZP_07011484.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308231594|ref|ZP_07413029.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu001] gi|308370001|ref|ZP_07419915.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu002] gi|308370453|ref|ZP_07421552.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu003] gi|308371712|ref|ZP_07425924.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu004] gi|308373528|ref|ZP_07432668.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu005] gi|308374049|ref|ZP_07434638.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu006] gi|308375204|ref|ZP_07443071.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu007] gi|308376450|ref|ZP_07438864.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu008] gi|308377469|ref|ZP_07479264.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu009] gi|308378677|ref|ZP_07483457.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu010] gi|308379821|ref|ZP_07487689.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu011] gi|308395898|ref|ZP_07492196.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu012] gi|2222770|emb|CAB09950.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE2B [Mycobacterium tuberculosis H37Rv] gi|31617357|emb|CAD93465.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE2B [Mycobacterium bovis AF2122/97] gi|121492153|emb|CAL70618.1| Conserved hypothetical integral membrane protein yrbE2B [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148504509|gb|ABQ72318.1| conserved hypothetical integral membrane protein YrbE2b [Mycobacterium tuberculosis H37Ra] gi|148720317|gb|ABR04942.1| hypothetical integral membrane protein yrbE2B [Mycobacterium tuberculosis F11] gi|224772091|dbj|BAH24897.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253319025|gb|ACT23628.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis KZN 1435] gi|289419099|gb|EFD16300.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis CPHL_A] gi|289537619|gb|EFD42197.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis K85] gi|289684830|gb|EFD52318.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis 02_1987] gi|289708213|gb|EFD72229.1| hypothetical integral membrane protein yrbE2B [Mycobacterium tuberculosis GM 1503] gi|298493869|gb|EFI29163.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308216591|gb|EFO75990.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu001] gi|308325672|gb|EFP14523.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu002] gi|308331898|gb|EFP20749.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu003] gi|308335685|gb|EFP24536.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu004] gi|308337264|gb|EFP26115.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu005] gi|308343189|gb|EFP32040.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu006] gi|308347056|gb|EFP35907.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu007] gi|308350999|gb|EFP39850.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu008] gi|308355633|gb|EFP44484.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu009] gi|308359588|gb|EFP48439.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu010] gi|308363516|gb|EFP52367.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu011] gi|308367197|gb|EFP56048.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu012] gi|328457305|gb|AEB02728.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis KZN 4207] Length = 295 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 4/106 (3%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V +I FVT G++IA QG L G E F+ ++ R +++ V +A G+ Sbjct: 84 VAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIVSGVALAATVGAG 143 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRI-WALIISLPLLTI 272 A++G+M+I+EEIDA+ MG+ + L+S RI L++ +PL + Sbjct: 144 ATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYAL 189 >gi|289752627|ref|ZP_06512005.1| integral membrane protein [Mycobacterium tuberculosis EAS054] gi|289693214|gb|EFD60643.1| integral membrane protein [Mycobacterium tuberculosis EAS054] Length = 295 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 4/106 (3%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V +I FVT G++IA QG L G E F+ ++ R +++ V +A G+ Sbjct: 84 VAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIVSGVALAATVGAG 143 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRI-WALIISLPLLTI 272 A++G+M+I+EEIDA+ MG+ + L+S RI L++ +PL + Sbjct: 144 ATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYAL 189 >gi|167969011|ref|ZP_02551288.1| hypothetical integral membrane protein yrbE2B [Mycobacterium tuberculosis H37Ra] gi|215402356|ref|ZP_03414537.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis 02_1987] gi|215410129|ref|ZP_03418937.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis 94_M4241A] gi|215425820|ref|ZP_03423739.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis T92] gi|215429421|ref|ZP_03427340.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis EAS054] gi|218752228|ref|ZP_03531024.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis GM 1503] gi|219556430|ref|ZP_03535506.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis T17] gi|254549543|ref|ZP_05139990.1| hypothetical protein Mtube_03620 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185465|ref|ZP_05762939.1| hypothetical protein MtubCP_05439 [Mycobacterium tuberculosis CPHL_A] gi|260199593|ref|ZP_05767084.1| hypothetical protein MtubT4_05539 [Mycobacterium tuberculosis T46] gi|260203752|ref|ZP_05771243.1| hypothetical protein MtubK8_05504 [Mycobacterium tuberculosis K85] gi|297633082|ref|ZP_06950862.1| hypothetical protein MtubK4_03110 [Mycobacterium tuberculosis KZN 4207] gi|297730060|ref|ZP_06959178.1| hypothetical protein MtubKR_03155 [Mycobacterium tuberculosis KZN R506] gi|313657387|ref|ZP_07814267.1| hypothetical protein MtubKV_03145 [Mycobacterium tuberculosis KZN V2475] Length = 246 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 4/106 (3%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V +I FVT G++IA QG L G E F+ ++ R +++ V +A G+ Sbjct: 35 VAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIVSGVALAATVGAG 94 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRI-WALIISLPLLTI 272 A++G+M+I+EEIDA+ MG+ + L+S RI L++ +PL + Sbjct: 95 ATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYAL 140 >gi|118463838|ref|YP_884136.1| hypothetical protein MAV_5016 [Mycobacterium avium 104] gi|254776558|ref|ZP_05218074.1| hypothetical protein MaviaA2_18084 [Mycobacterium avium subsp. avium ATCC 25291] gi|118165125|gb|ABK66022.1| conserved hypothetical protein [Mycobacterium avium 104] Length = 289 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 94/181 (51%), Gaps = 13/181 (7%) Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 RS F + +NL+ + G + ++D A G+ +++ S Y+ + L LI Q Sbjct: 8 RSRFPRAAENLNRY-GLAAARGLDDVGQMAWFGGVALAHI-PHALSHYRKE--TLRLIAQ 63 Query: 160 MYYVGVSGVPV----VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 + +G + V V ++ FVT +++A QG L G E F+ +++ +R Sbjct: 64 IG-MGTGAMAVIGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAA 122 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPLLT 271 ++T + +A G+ AE+G+M+I+EEIDA+ MG+ + L + RI A L++ +PL Sbjct: 123 PVVTGIAMAATVGAGATAELGAMRISEEIDALEVMGIKSISFLATTRIMAGLVVIIPLYA 182 Query: 272 I 272 + Sbjct: 183 L 183 >gi|289552841|ref|ZP_06442051.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis KZN 605] gi|289437473|gb|EFD19966.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis KZN 605] Length = 294 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 4/106 (3%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V +I FVT G++IA QG L G E F+ ++ R +++ V +A G+ Sbjct: 83 VAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIVSGVALAATVGAG 142 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRI-WALIISLPLLTI 272 A++G+M+I+EEIDA+ MG+ + L+S RI L++ +PL + Sbjct: 143 ATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYAL 188 >gi|15839990|ref|NP_335027.1| hypothetical protein MT0617 [Mycobacterium tuberculosis CDC1551] gi|254230928|ref|ZP_04924255.1| hypothetical integral membrane protein yrbE2B [Mycobacterium tuberculosis C] gi|254363546|ref|ZP_04979592.1| hypothetical integral membrane protein yrbE2B [Mycobacterium tuberculosis str. Haarlem] gi|13880132|gb|AAK44841.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|124599987|gb|EAY58997.1| hypothetical integral membrane protein yrbE2B [Mycobacterium tuberculosis C] gi|134149060|gb|EBA41105.1| hypothetical integral membrane protein yrbE2B [Mycobacterium tuberculosis str. Haarlem] gi|323720940|gb|EGB30005.1| hypothetical protein TMMG_03291 [Mycobacterium tuberculosis CDC1551A] Length = 295 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 4/106 (3%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V +I FVT G++IA QG L G E F+ ++ R +++ V +A G+ Sbjct: 84 VAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIVSGVALAATVGAG 143 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRI-WALIISLPLLTI 272 A++G+M+I+EEIDA+ MG+ + L+S RI L++ +PL + Sbjct: 144 ATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYAL 189 >gi|227536152|ref|ZP_03966201.1| ABC superfamily ATP binding cassette transporter permease protein [Sphingobacterium spiritivorum ATCC 33300] gi|300772122|ref|ZP_07081992.1| ABC superfamily ATP binding cassette transporter permease protein [Sphingobacterium spiritivorum ATCC 33861] gi|227244049|gb|EEI94064.1| ABC superfamily ATP binding cassette transporter permease protein [Sphingobacterium spiritivorum ATCC 33300] gi|300760425|gb|EFK57251.1| ABC superfamily ATP binding cassette transporter permease protein [Sphingobacterium spiritivorum ATCC 33861] Length = 244 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 46/129 (35%), Positives = 76/129 (58%), Gaps = 17/129 (13%) Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM--SIL-------QLRE 210 M +G+ + ++++IS GAV+ Q AFQL DL+ SI+ + E Sbjct: 34 MTDIGLGSLGLIVIISTFIGAVMTMQIAFQLVS--------DLIPNSIIGQINRDSNILE 85 Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 +G ++A+++ G+ GS+I ++IGSM++ E+IDA+ MG++ LI P+I A I +P L Sbjct: 86 LGPTISALVLMGKVGSSISSQIGSMRVTEQIDALEIMGINAPGYLILPKILAGITMIPAL 145 Query: 271 TILANFSAI 279 I+A F AI Sbjct: 146 VIVAIFCAI 154 >gi|54023080|ref|YP_117322.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54014588|dbj|BAD55958.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 281 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 51/97 (52%) Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 I EEIDA+ TMG+ + L+ PR+ A++I PLL +L F ++ V D+ Sbjct: 141 IREEIDALHTMGISPIHRLVIPRMVAMLIVAPLLNVLVIFVGVLAGYAVAIGGQDVTPGS 200 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 +++ F S + A+++ L KA + I+A + G Sbjct: 201 YWATFGSFTSTADVWVSLGKALIFGFLVVIIACQRGL 237 >gi|183984956|ref|YP_001853247.1| membrane protein YrbE4B [Mycobacterium marinum M] gi|183178282|gb|ACC43392.1| conserved hypothetical membrane protein YrbE4B [Mycobacterium marinum M] Length = 280 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 20/203 (9%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V ++ +G VIA QG L G E + L + L +R + ++ + +A G+ Sbjct: 69 VGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAG 128 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPLLT-------ILANFSAI 279 A++G+M+++EEIDA+ M + V L+S R+ A L+ +PL + A F+ + Sbjct: 129 ATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLAVLAAFFAARFTTV 188 Query: 280 I--GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 G S ++ +Y F++ +++ ++A MA A+ +V G+ Sbjct: 189 FINGQSAGLYDHY----------FNTFLIPSDLLWSFLQAIVMAIAVMLVHTYYGYNASG 238 Query: 338 HSNSLGKKVTTCVVQSISIVIII 360 S +G V V S+ +V++I Sbjct: 239 GSVGVGIAVGQAVRTSLIVVVVI 261 >gi|118619253|ref|YP_907585.1| membrane protein YrbE4B [Mycobacterium ulcerans Agy99] gi|118571363|gb|ABL06114.1| conserved hypothetical membrane protein YrbE4B [Mycobacterium ulcerans Agy99] Length = 280 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 20/203 (9%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V ++ +G VIA QG L G E + L + L +R + ++ + +A G+ Sbjct: 69 VGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAG 128 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPLLT-------ILANFSAI 279 A++G+M+++EEIDA+ M + V L+S R+ A L+ +PL + A F+ + Sbjct: 129 ATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLAVLAAFFAARFTTV 188 Query: 280 I--GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 G S ++ +Y F++ +++ ++A MA A+ +V G+ Sbjct: 189 FINGQSAGLYDHY----------FNTFLIPSDLLWSFLQAIVMAIAVMLVHTYYGYNASG 238 Query: 338 HSNSLGKKVTTCVVQSISIVIII 360 S +G V V S+ +V++I Sbjct: 239 GSVGVGIAVGQAVRTSLIVVVVI 261 >gi|313673540|ref|YP_004051651.1| hypothetical protein Calni_1580 [Calditerrivibrio nitroreducens DSM 19672] gi|312940296|gb|ADR19488.1| protein of unknown function DUF140 [Calditerrivibrio nitroreducens DSM 19672] Length = 258 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 1/78 (1%) Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-L 263 ++ +RE+ LTA++++ RS +A+ AEI MK+ EI +I+ G+D L PRI+A + Sbjct: 96 VVVIREVAPFLTALLLSLRSATAVGAEISMMKLGSEIRSIKIHGIDEYSYLFLPRIFAGM 155 Query: 264 IISLPLLTILANFSAIIG 281 + S L I + S IG Sbjct: 156 VCSFSLAVIFSAVSITIG 173 >gi|326383098|ref|ZP_08204787.1| hypothetical protein SCNU_09176 [Gordonia neofelifaecis NRRL B-59395] gi|326198234|gb|EGD55419.1| hypothetical protein SCNU_09176 [Gordonia neofelifaecis NRRL B-59395] Length = 283 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 50/169 (29%), Positives = 87/169 (51%), Gaps = 6/169 (3%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V VV ++ TG IA QG L+ G E + + + +R ++ + +A G+ Sbjct: 72 VVVVGFLTLFTGGTIAVQGYSSLANIGVEALTGFFSAFINVRIAVPVIAGIALAATIGAG 131 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL--LTILANFSAIIGASI 284 A++G+M+++EEIDA+ M + V L+S RI A L+ +PL L LA+F A A++ Sbjct: 132 ATAQLGAMRVSEEIDALEVMAISSVPYLVSTRIVAGLVAIIPLYSLAALASFLASRFATV 191 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 V++ + +FS F ++I ++A MA A+ ++ GF Sbjct: 192 VLYGQSSGVYDHYFSTFLIP---SDILWSFVQAICMAVAVMLIHTYYGF 237 >gi|296138973|ref|YP_003646216.1| hypothetical protein Tpau_1246 [Tsukamurella paurometabola DSM 20162] gi|296027107|gb|ADG77877.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM 20162] Length = 285 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 1/209 (0%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 +L + Y +GV+ P ILI+ G VI+ Q + Q GA+ S + + + + Sbjct: 64 TLYQTWYMIGVTAFPG-ILIAIPFGIVISIQVGNIIHQLGADSLSGAAGGLAVIAQGAPI 122 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 T +++AG SAI A++G+ I EE DA+R MG++ + L+ PR+ A I PLL +L Sbjct: 123 ATGLLLAGAGASAIAADLGARTIREETDAMRVMGINPINRLVVPRLLAAWIVSPLLNLLI 182 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 I +V + ++ F S A +++ L+K+ I I+ + G Sbjct: 183 IGVGTIAGYLVAVGGQGVTPGAYWLSFGSFAHPIDVWISLVKSIIFGTIIAIIGCQRGLE 242 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 S + V VV S ++ ++ L Sbjct: 243 AKGGSRGVADGVNATVVLSFVVIFAVNLL 271 >gi|254458766|ref|ZP_05072190.1| ABC transporter permease protein [Campylobacterales bacterium GD 1] gi|207084532|gb|EDZ61820.1| ABC transporter permease protein [Campylobacterales bacterium GD 1] Length = 262 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 18/193 (9%) Query: 156 LIRQMYYVGVSGVPVVILI-----SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210 L +Q+Y+ V +P+ + + S + G VIA + L EI SI + ++ E Sbjct: 48 LTKQIYFTTVQIIPLFMTMAILFGSVIIGVVIALATQYNLQD---EIGSIIITFVID--E 102 Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 TA++I+ RSG+A+ EI M +N+E++ + +D + L PRI + +IS L Sbjct: 103 FSPFFTALLISLRSGAAVNTEIAVMNVNKELNTLEKYKIDLIDYLFLPRIISGMISAVSL 162 Query: 271 TILANFSAIIGASIVIWK--YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328 +IL F+ I+ +S I+ Y ++ F + S ++ LIK + A G V Sbjct: 163 SIL--FAVIMLSSGYIFTLFYMNMDFHTYKYILISAIEFKDLVVLLIK----SMAFGFVT 216 Query: 329 MKEGFAVGVHSNS 341 M G+ + S Sbjct: 217 MLIPIYSGLKTTS 229 >gi|169628106|ref|YP_001701755.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977] gi|169240073|emb|CAM61101.1| Putative YrbE family protein [Mycobacterium abscessus] Length = 285 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/101 (26%), Positives = 62/101 (61%), Gaps = 1/101 (0%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V+I++ + G ++A +G L G + + S++ RE+ ++ A+ A ++G Sbjct: 76 VMIVLGVIAGGLVAIEGYNFLDLLGLGPATGIISSLVNTRELAPIMAAIAFATQAGCRFT 135 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIW-ALIISLPL 269 A++G+M+I+EEIDA+ ++ + + L++ R+ A+++++PL Sbjct: 136 AQLGAMRISEEIDAMDSIAIRPIPYLVTTRLMAAIVVTIPL 176 >gi|163786261|ref|ZP_02180709.1| hypothetical protein FBALC1_13787 [Flavobacteriales bacterium ALC-1] gi|159878121|gb|EDP72177.1| hypothetical protein FBALC1_13787 [Flavobacteriales bacterium ALC-1] Length = 245 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 62/116 (53%), Gaps = 2/116 (1%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTAVMIAGRSGSAI 228 +V I+F G V+A Q + ++ + + + + E ++++AG+ GS I Sbjct: 45 IVAFIAFFVGGVVAIQTSLNINNPLIPKYLVGFATRQSIILEFAPTFISIIMAGKVGSFI 104 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 + IG+M++ E+IDA+ MG++ + L+ P+ AL + P + +A F ++G + Sbjct: 105 TSSIGTMRVTEQIDALEVMGINAINYLVFPKFIALTL-YPFVISIAMFLGVLGGMV 159 >gi|145220617|ref|YP_001131295.1| hypothetical protein Mflv_0011 [Mycobacterium gilvum PYR-GCK] gi|145213103|gb|ABP42507.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] Length = 285 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/110 (29%), Positives = 64/110 (58%), Gaps = 3/110 (2%) Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G +GV +V+ I+ GA++ +G L G + + S++ RE+ + ++ A + Sbjct: 72 GTAGVAIVLGIT--VGALVGIEGYNFLDMLGLGPATGIISSLVNTRELAPIAASLAFATQ 129 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTI 272 +G A++GSM+I EEIDA+ ++G+ + L++ R+ A +I+ +PL + Sbjct: 130 AGCRFTAQLGSMRIAEEIDALESLGIRPIPYLVTTRLMASVIAVIPLYVV 179 >gi|219559567|ref|ZP_03538643.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis T17] gi|260202679|ref|ZP_05770170.1| hypothetical protein MtubT4_21963 [Mycobacterium tuberculosis T46] gi|289445097|ref|ZP_06434841.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis T46] gi|289571733|ref|ZP_06451960.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis T17] gi|289418016|gb|EFD15256.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis T46] gi|289545487|gb|EFD49135.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis T17] Length = 280 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 63/114 (55%), Gaps = 3/114 (2%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V ++ +G VIA QG L G E L + L +R + ++ + +A G+ Sbjct: 69 VGVAAFLTLASGGVIAVQGYSSLGDIGIEALIGFLSAFLNVRVVAPVIAGIALAATIGAG 128 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL--LTILANFSA 278 A++G+M+++EEIDA+ M + V L+S R+ A L+ +PL L++LA F A Sbjct: 129 ATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFA 182 >gi|296171120|ref|ZP_06852573.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894376|gb|EFG74129.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 284 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 61/106 (57%), Gaps = 1/106 (0%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V +V ++ TGAVIA QG QLS G E + + + + +R I + V +A G+ Sbjct: 73 VVIVGFLTLSTGAVIAVQGYNQLSGIGVEAMTGFISAYVNVRIISPAVAGVGLAATIGAG 132 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPLLTI 272 A++G+M+I +EIDA+ M + V L+S R+ A +++ +PL + Sbjct: 133 ATAQLGAMRIADEIDALEVMAVRSVAYLVSTRVAAGVVVVIPLYCV 178 >gi|15828392|ref|NP_302655.1| hypothetical protein ML2588 [Mycobacterium leprae TN] gi|221230869|ref|YP_002504285.1| hypothetical protein MLBr_02588 [Mycobacterium leprae Br4923] gi|13093822|emb|CAC32120.1| conserved membrane protein [Mycobacterium leprae] gi|219933976|emb|CAR72688.1| conserved membrane protein [Mycobacterium leprae Br4923] Length = 289 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 93/181 (51%), Gaps = 13/181 (7%) Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 R+ F + NL+ + G + I+D Q GL+ G + +++ L LI Q Sbjct: 8 RARFPRAAANLNRY-GGAAARGIDD-IGQMSWFGLI--ALGNIPNALSRYRKETLRLIAQ 63 Query: 160 MYYVGVSGVPVV----ILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 + +G + VV ++ FVT +++A QG L G E F+ +++ +R Sbjct: 64 IG-MGTGAMAVVGGTAAIVGFVTLSGSSLVAIQGFASLGAIGVEAFTGFFAALINVRIAA 122 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPLLT 271 ++T +++A G+ AE+G+M+I+EEIDA+ M + + L++ RI A L++ +PL Sbjct: 123 PVITGIVMAATVGAGATAELGAMRISEEIDALEVMSIKSISFLVTTRILAGLVVIVPLYA 182 Query: 272 I 272 + Sbjct: 183 V 183 >gi|120401973|ref|YP_951802.1| hypothetical protein Mvan_0958 [Mycobacterium vanbaalenii PYR-1] gi|119954791|gb|ABM11796.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 285 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 63/107 (58%), Gaps = 3/107 (2%) Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G +GV VV+ I+ GA++ +G L G + + S++ RE+ + ++ A + Sbjct: 72 GTAGVAVVLGIT--VGALVGIEGYNFLDLLGLGPATGIISSLVNTRELAPIAASLAFATQ 129 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPL 269 +G A++GSM+I EEIDA+ ++G+ + L++ R+ A +++ +PL Sbjct: 130 AGCRFTAQLGSMRIAEEIDALESLGIRPIPYLVTTRLMASVVAVIPL 176 >gi|317508867|ref|ZP_07966506.1| hypothetical protein HMPREF9336_02878 [Segniliparus rugosus ATCC BAA-974] gi|316252828|gb|EFV12259.1| hypothetical protein HMPREF9336_02878 [Segniliparus rugosus ATCC BAA-974] Length = 315 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 2/109 (1%) Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI-IGASI 284 SA+ ++G+ I EEIDA+ MG++ VR L+SPR+ A++ PLL + F + G I Sbjct: 164 SAVATDLGARSIREEIDAMLVMGINPVRRLVSPRLAAILFVAPLLCVFIIFMGLAAGYVI 223 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 I P + + + F + A + ++ LIK+ ++A + G Sbjct: 224 AIVGMSGTPGS-YIASFSAFARVEDMAVALIKSLLFGVVAILIACQRGL 271 >gi|54023081|ref|YP_117323.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54014589|dbj|BAD55959.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 288 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 57/105 (54%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 R VG VP+++++ V GA + + L G + + + RE+ + A Sbjct: 67 RGSIVVGGGTVPMMVVLGLVMGASVGVESFATLDMLGMGPVTGIVSAYATTRELAPIAAA 126 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 V A ++G I AEIGSM+I+EEIDAI ++GL V +++ R+ A Sbjct: 127 VGFAAQAGCRITAEIGSMRISEEIDAIESLGLRSVPFVVTTRVIA 171 >gi|254822927|ref|ZP_05227928.1| hypothetical protein MintA_23569 [Mycobacterium intracellulare ATCC 13950] Length = 289 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 92/180 (51%), Gaps = 17/180 (9%) Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 RS F + +NL+ + G + ++D A G+ +++ + + + +R Sbjct: 8 RSRFPRAAENLNRY-GLAAARGLDDIGQMAWFGGVALAHI------PHALRNYRKETLRL 60 Query: 160 MYYVGV-SGVPVVI-----LISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210 + +G+ +G VI ++ FVT +++A QG L G E F+ +++ +R Sbjct: 61 VAQIGMGTGAMAVIGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRI 120 Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL 269 ++T + +A G+ AE+G+M+I+EEIDA+ MG+ + L + RI A L++ +PL Sbjct: 121 AAPVVTGIAMAATVGAGATAELGAMRISEEIDALEVMGIKSISFLATTRIMAGLVVIIPL 180 >gi|41409701|ref|NP_962537.1| hypothetical protein MAP3603 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398533|gb|AAS06153.1| hypothetical protein MAP_3603 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 251 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/103 (33%), Positives = 60/103 (58%), Gaps = 4/103 (3%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V ++ FVT +++A QG L G E F+ +++ +R ++T + +A G+ Sbjct: 40 VAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAAPVVTGIAMAATVGAG 99 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL 269 AE+G+M+I+EEIDA+ MG+ + L + RI A L++ +PL Sbjct: 100 ATAELGAMRISEEIDALEVMGIKSISFLATTRIMAGLVVIIPL 142 >gi|300789440|ref|YP_003769731.1| ABC transporter permease [Amycolatopsis mediterranei U32] gi|299798954|gb|ADJ49329.1| ABC transport system permease protein [Amycolatopsis mediterranei U32] Length = 271 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 1/96 (1%) Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG + QG L+Q + L + REI L+ + ++ GS A++G+M+I Sbjct: 70 TGVTVGLQGFSALNQINISAMTGFLTAYFNTREIAPLVAGLALSSTVGSGFTAQLGAMRI 129 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIIS-LPLLTI 272 +EEIDA+ M + + L++ RI A I+ +PL I Sbjct: 130 SEEIDALEVMAVRSMPYLVTTRIVAGFIAIIPLYVI 165 >gi|224369539|ref|YP_002603703.1| ABC-type transport system involved in resitance to organic solvents, permease protein [Desulfobacterium autotrophicum HRM2] gi|223692256|gb|ACN15539.1| ABC-type transport system involved in resitance to organic solvents, permease protein [Desulfobacterium autotrophicum HRM2] Length = 278 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 62/116 (53%) Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 RQ+ G+ + V L++ G ++ Q L + G + L ++ +RE+ LLT Sbjct: 64 RQLLETGIKTIIPVGLVALFIGVLVVMQAQLWLGKLGQTEWLGPLFVVVVVRELAPLLTN 123 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 +++ ++GS + +E+ M ++ ++ + G+D + LI PR+ A ++S LT+L Sbjct: 124 LIMILQNGSKMTSELAGMTVSGKVRMLDAQGIDPLIYLILPRVTATVVSTFCLTLL 179 >gi|317508277|ref|ZP_07965957.1| hypothetical protein HMPREF9336_02329 [Segniliparus rugosus ATCC BAA-974] gi|316253452|gb|EFV12842.1| hypothetical protein HMPREF9336_02329 [Segniliparus rugosus ATCC BAA-974] Length = 280 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 62/121 (51%) Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 ++G+ I EEIDA+R +G++ + L++PR+ A++ P+L + F + ++ + Sbjct: 134 DLGARTIREEIDAMRVIGINPTQRLVAPRLAAMLFVSPMLCVFIVFITMTAGYLLAVMFQ 193 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 D+ + + F + A L++I+ + K+ F + IVA + G + + V V Sbjct: 194 DVTPGSYLASFGAFAKLSDIYVAIGKSVFFGIVVVIVACQRGLETKFGPRGVAESVNASV 253 Query: 351 V 351 V Sbjct: 254 V 254 >gi|169631108|ref|YP_001704757.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977] gi|169243075|emb|CAM64103.1| Putative YrbE family protein [Mycobacterium abscessus] Length = 292 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 47/73 (64%), Gaps = 3/73 (4%) Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA---LII 265 RE+ ++ A+ A ++G + AEIG+M+I+EEIDA+ G+ + +++ R+ A +I+ Sbjct: 122 REMAPMIAAIGFAAQAGCRMTAEIGAMRISEEIDALEAQGIRSIPFVVTTRVIAGIIIIV 181 Query: 266 SLPLLTILANFSA 278 L +LT+L + + Sbjct: 182 PLYVLTLLLAYGS 194 >gi|332043098|gb|EGI79296.1| protein of unknown function DUF140 [Lacinutrix algicola 5H-3-7-4] Length = 245 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 31/114 (27%), Positives = 59/114 (51%), Gaps = 2/114 (1%) Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL-REIGVLLTAVMIAGRSGSAI 228 +V I+F G VI Q A + + + + + E ++++AG+ GS I Sbjct: 45 IVAFIAFFVGGVITIQTALNIDNPLIPKYLVGFATRQSIILEFAPTFISIIMAGKVGSFI 104 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 + IG+M++ E+IDA+ MG++ + L+ P+ A+++ P + +A F I G Sbjct: 105 TSSIGTMRVTEQIDALEVMGINSINYLVFPKFVAMML-YPFVISIAMFLGIFGG 157 >gi|296167381|ref|ZP_06849783.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897325|gb|EFG76929.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 289 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 34/103 (33%), Positives = 60/103 (58%), Gaps = 4/103 (3%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V ++ FVT +++A QG L G E F+ +++ +R ++T + +A G+ Sbjct: 78 VAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAAPVVTGIAMAATVGAG 137 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL 269 AE+G+M+I+EEIDA+ MG+ + L + RI A L++ +PL Sbjct: 138 ATAELGAMRISEEIDALEVMGIKSISFLATTRIMAGLVVIIPL 180 >gi|251773083|gb|EES53637.1| probable ABC transporter, permease [Leptospirillum ferrodiazotrophum] Length = 146 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 52/90 (57%), Gaps = 1/90 (1%) Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 E+G M ++I+A+ MG+D V L++P+I A ++ LP+L+++ +F ++ V Sbjct: 1 ELGMMSTTQQIEALLVMGVDPVDRLVAPKILAGMVMLPVLSVVGDFLGVLAGLAVAMFGA 60 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFM 320 + +++S + T N+ G++K PF+ Sbjct: 61 HVAAPLYWSGVRTALTPPNLVNGIVK-PFV 89 >gi|58040452|ref|YP_192416.1| ABC transporter permease [Gluconobacter oxydans 621H] gi|58002866|gb|AAW61760.1| Putative ABC transport system permease protein [Gluconobacter oxydans 621H] Length = 274 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 17/186 (9%) Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 G+ ++ + +TG I Q + L G + ++S + +REI +L V++ GRSG Sbjct: 70 GILSTLVTAALTGFGIVAQTVYWLGFAGMAQMTGSILSTVLVREIAPVLVGVILLGRSGM 129 Query: 227 AIVAEIGSMKINEEIDAIRTMGLD-FVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 ++ E+G++ ++ A+ MG+D F+ L+ PR A+ IS L ++ + +A++ Sbjct: 130 LMLTELGTLTTGGQMRAMTGMGIDPFISFLL-PRSLAMTISGFTLGVIFSMTALL-VGYA 187 Query: 286 IWKYYD---IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 + + D +P F + S+ + F +I A F+ G+AVGV S Sbjct: 188 VCRVEDAITMPIWAFLDQVVSSVKPIDYF--VIPAKFIF---------SGYAVGVCSCLS 236 Query: 343 GKKVTT 348 G VTT Sbjct: 237 GMDVTT 242 >gi|254776984|ref|ZP_05218500.1| hypothetical protein MaviaA2_20266 [Mycobacterium avium subsp. avium ATCC 25291] Length = 292 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 4/106 (3%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V +I FVT G++IA QG L G E F+ ++ R ++ V +A G+ Sbjct: 81 VAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRIAAPIVAGVTLAATVGAG 140 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRI-WALIISLPLLTI 272 A++G+M+I+EEIDA+ MG+ + L+S RI L + +PL + Sbjct: 141 ATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLAVIVPLYAL 186 >gi|262202880|ref|YP_003274088.1| hypothetical protein Gbro_2987 [Gordonia bronchialis DSM 43247] gi|262086227|gb|ACY22195.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247] Length = 288 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%) Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA + + L+ G + L + REI LL A +SG A++GSM+I Sbjct: 88 GATVGIEAYTALNLLGMAPVTGGLSAFATTREIAPLLAATAFTAQSGCRFTAQLGSMRIA 147 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISL-PL--LTILANFSA 278 EEIDA+ + + + L++ R+ A ++++ PL +++ AN+ A Sbjct: 148 EEIDALEAIAIRPLPYLVTTRMLAAVLAIVPLYSVSLAANYIA 190 >gi|312137896|ref|YP_004005232.1| integral membrane protein yrbe1b [Rhodococcus equi 103S] gi|325673337|ref|ZP_08153029.1| ABC superfamily ATP binding cassette transporter, permease protein [Rhodococcus equi ATCC 33707] gi|311887235|emb|CBH46544.1| putative integral membrane protein YrbE1B [Rhodococcus equi 103S] gi|325555927|gb|EGD25597.1| ABC superfamily ATP binding cassette transporter, permease protein [Rhodococcus equi ATCC 33707] Length = 285 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 89/185 (48%), Gaps = 13/185 (7%) Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q+G L G S L +I RE+ ++ A+ +A + G+ A++G+M+I++EIDA Sbjct: 92 QRG---LELVGMTTLSGMLSAIANTRELAPVVVAIALAAKVGTGFTAQLGAMRISDEIDA 148 Query: 244 IRTMGLDFVRILISPRIW-ALIISLPLLTI--LANF--SAIIGASIVIWKYYDIPFAVFF 298 + +MG+ + L R+ A++ LP+ I LA++ + ++ IV+W +F Sbjct: 149 LDSMGVRSIPFLAGTRVLAAMVCVLPIFMIGLLASYLSTRLV---IVVWGGASAGTYDYF 205 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 FH + ++ IKA A + +V G+ +G+ + +I + Sbjct: 206 --FHLALSPVDLVYAAIKAIVFAGVVALVHCSYGYFASGGPAGVGQAAGRALRTAILAIG 263 Query: 359 IIDSL 363 ++D L Sbjct: 264 VLDVL 268 >gi|240170712|ref|ZP_04749371.1| hypothetical protein MkanA1_15460 [Mycobacterium kansasii ATCC 12478] Length = 284 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 42/118 (35%), Positives = 64/118 (54%), Gaps = 6/118 (5%) Query: 148 KFKGFLLSLIRQMYY----VGVSGVPVVIL--ISFVTGAVIAQQGAFQLSQFGAEIFSID 201 ++ +L LI QM + V G VVI+ ++ TGAVIA QG QLS G E + Sbjct: 47 RYGKEILRLIAQMSLGTGALAVIGGTVVIVGFLTLSTGAVIAVQGYNQLSGIGVEAMTGF 106 Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 + + + +R I + V +A G+ A++G+M+I EEIDA+ M + V L+S R Sbjct: 107 ISAYVNVRIISPAVAGVGLAATIGAGATAQLGAMRIAEEIDALEVMAVRSVAYLVSTR 164 >gi|41410181|ref|NP_963017.1| hypothetical protein MAP4083 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41399015|gb|AAS06633.1| hypothetical protein MAP_4083 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 292 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 4/106 (3%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V +I FVT G++IA QG L G E F+ ++ R ++ V +A G+ Sbjct: 81 VAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRIAAPIVAGVTLAATVGAG 140 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRI-WALIISLPLLTI 272 A++G+M+I+EEIDA+ MG+ + L+S RI L + +PL + Sbjct: 141 ATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLAVIVPLYAL 186 >gi|118467306|ref|YP_883683.1| hypothetical protein MAV_4552 [Mycobacterium avium 104] gi|118168593|gb|ABK69490.1| conserved hypothetical protein [Mycobacterium avium 104] Length = 292 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 4/106 (3%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V +I FVT G++IA QG L G E F+ ++ R ++ V +A G+ Sbjct: 81 VAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRIAAPIVAGVTLAATVGAG 140 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRI-WALIISLPLLTI 272 A++G+M+I+EEIDA+ MG+ + L+S RI L + +PL + Sbjct: 141 ATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLAVIVPLYAL 186 >gi|326383822|ref|ZP_08205507.1| hypothetical protein SCNU_12842 [Gordonia neofelifaecis NRRL B-59395] gi|326197586|gb|EGD54775.1| hypothetical protein SCNU_12842 [Gordonia neofelifaecis NRRL B-59395] Length = 286 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 41/163 (25%), Positives = 78/163 (47%), Gaps = 6/163 (3%) Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR-I 260 L +I RE+ ++ A+ +A + G+ A+IG+M+I++EI A+ M + V L + R I Sbjct: 108 LAAIANTRELAPVVVAIALAAKVGTGFTAQIGAMRISDEIAALDAMAIRSVPFLATTRMI 167 Query: 261 WALIISLP--LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318 A++ LP ++ +LA++ A +V+W Y+ + FH T ++ KA Sbjct: 168 AAMVCVLPIYMVGLLASYVAT--RLVVVW-YHGESSGTYDYFFHLALTPTDLLYSATKAV 224 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 A + +V G+ +G+ + SI + + D Sbjct: 225 VFAAIVTLVHCSYGYFASGGPEGVGQAAGRALRTSILSIGVFD 267 >gi|118467026|ref|YP_884172.1| ABC transporter transmembrane protein [Mycobacterium avium 104] gi|118168313|gb|ABK69210.1| ABC transporter integral membrane protein [Mycobacterium avium 104] Length = 235 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 48/199 (24%), Positives = 102/199 (51%), Gaps = 5/199 (2%) Query: 165 VSGVPVVIL-ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 V+ +P V++ I F GA++A Q + +++ GA + LR+ + +++ G Sbjct: 24 VTALPAVLMAIPF--GAMVAVQLSGLVNEVGANSLVGSATGVAVLRQGAPVTAGLLMGGA 81 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 + SAI ++ G+ I EE+DA++T+G+D VR L+ PR L++ P L ++ + +GA+ Sbjct: 82 AASAIASDFGARAIREELDALKTLGIDPVRRLVVPRFLGLLLITPSLVVIV-IAMGVGAA 140 Query: 284 IVIWKYYD-IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 VI + + F+ F S A + +++ + K A + +++ + G + Sbjct: 141 FVIATVVNGVTPGSFWLSFGSFAKMVDLWFTMGKGFIFAGIVAVISSQRGMEAKGGPRGV 200 Query: 343 GKKVTTCVVQSISIVIIID 361 V VV ++ +++++ Sbjct: 201 ADAVNASVVLNVIFIVVVN 219 >gi|183983838|ref|YP_001852129.1| integral ABC-type transport protein [Mycobacterium marinum M] gi|183177164|gb|ACC42274.1| conserved hypothetical integral ABC-type transport protein [Mycobacterium marinum M] Length = 287 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 61/107 (57%), Gaps = 3/107 (2%) Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G +GV VV+ GA++ +G L G + + S++ RE+ L+ ++ A + Sbjct: 74 GTAGVAVVL--GMTVGALLGIEGYNFLDLLGLGPATGLISSLVNTRELAPLMASLAFAMQ 131 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PL 269 +G A++GSM+I EEIDA+ ++ + + L++ R+ A I+++ PL Sbjct: 132 AGCRFTAQLGSMRIAEEIDAMESIAIRPIPFLVTTRLVASIVAMIPL 178 >gi|145221307|ref|YP_001131985.1| hypothetical protein Mflv_0712 [Mycobacterium gilvum PYR-GCK] gi|315441805|ref|YP_004074684.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|145213793|gb|ABP43197.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] gi|315260108|gb|ADT96849.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 290 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 47/165 (28%), Positives = 86/165 (52%), Gaps = 21/165 (12%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV----ILISFVT---G 179 S H+ V++ G + ++ +L LI ++ +G + VV ++ FVT Sbjct: 32 SIGHVAWFVVTAVGSIGHAVRYYRKEMLRLIAEIG-MGTGAMAVVGGTVAIVGFVTLSGS 90 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS-----GSAIVAEIGS 234 +++A QG L G E F+ +++ +R + A ++AG++ G+ AE+G+ Sbjct: 91 SLVAIQGFASLGNIGVEAFTGFFAALINVR-----IAAPVVAGQALAATVGAGATAELGA 145 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWA---LIISLPLLTILANF 276 M+I+EEIDA+ MG+ + L+S RI A +II L + I+ +F Sbjct: 146 MRISEEIDALEVMGIKSISYLVSTRIVAGFVVIIPLYAMAIIMSF 190 >gi|240168188|ref|ZP_04746847.1| hypothetical protein MkanA1_02657 [Mycobacterium kansasii ATCC 12478] Length = 272 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 4/101 (3%) Query: 173 LISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ FVT +++A QG L G E F+ +++ +R ++T V +A G+ Sbjct: 63 IVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAAPVVTGVAMAATVGAGAT 122 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWA-LIISLPL 269 AE+G+M+I+EEIDA+ MG+ V L + RI A L + +PL Sbjct: 123 AELGAMRISEEIDALEVMGIKSVCFLATTRILAGLTVIIPL 163 >gi|296089608|emb|CBI39427.3| unnamed protein product [Vitis vinifera] Length = 329 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 16/140 (11%) Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 ++E+ D +R +G + V L++PR+ A I+LP LT+L + ++++ Y I Sbjct: 185 PVSEQTDTLRVLGTNPVDYLVTPRVIASCIALPFLTLLCFTVGMASSALLADSVYGISIN 244 Query: 296 VFFSRFHSTATLANIFTGLIKA-------PFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + +I + +IK+ ++CA G+ M G A GV G+ T+ Sbjct: 245 IILDSAQRALNSWDIISAMIKSVAFGGIISTVSCAWGVTTM--GGAKGV-----GESTTS 297 Query: 349 CVVQSISIVIIIDSLFAIFY 368 VV S+ + I D FA+ Y Sbjct: 298 AVVISLVGIFIAD--FALSY 315 >gi|254819937|ref|ZP_05224938.1| TrnB2 protein [Mycobacterium intracellulare ATCC 13950] Length = 282 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 6/197 (3%) Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TGA I Q LS G E S + L R L +A+ +A G+ A++G+M+I Sbjct: 81 TGAFIGIQLYRSLSDVGVEALSGFASAYLNTRFAAPLTSAIGLAATIGAGATAQLGAMRI 140 Query: 238 NEEIDAIRTMGLDFVRILISPRIWA-LIISLPL--LTILANFSAIIGASIVIWKYYDIPF 294 NEEIDA+ MG+ + L S RI A +++++PL L+ LA + A ++V+ + P Sbjct: 141 NEEIDALEVMGIRAISYLASTRIVAGVLVTVPLWCLSSLAGYLAT--RTLVVVAFGQAP- 197 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 V+ F++ ++ L++ A + +V GF +G+ V V S+ Sbjct: 198 GVYDHYFNTYLQPTDLIWSLLQVIATATVVMLVHTYYGFNATGGPAGVGEAVGRSVRASL 257 Query: 355 SIVIIIDSLFAIFYFAI 371 + + + A+ + + Sbjct: 258 VVAVTVQLAVAMAAYGV 274 >gi|326331673|ref|ZP_08197961.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] gi|325950472|gb|EGD42524.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] Length = 273 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 53/93 (56%) Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 IL++ G V + Q + GA FS + + LR+ L+T+++IA GSAI ++ Sbjct: 68 ILVAIPFGVVTSIQVGAVANSIGASSFSGAVNGVGVLRQAAPLVTSLIIACVVGSAICSD 127 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264 +G I +EI A+ MG + V+ +++PRI A + Sbjct: 128 LGMRAIRDEIAALEVMGTNPVQRMVAPRIVAAV 160 >gi|120401161|ref|YP_950990.1| hypothetical protein Mvan_0133 [Mycobacterium vanbaalenii PYR-1] gi|119953979|gb|ABM10984.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 289 Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 16/117 (13%) Query: 171 VILISFVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS--- 224 V ++ FVT +++A QG L G E F+ +++ +R + A ++AG++ Sbjct: 78 VAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVR-----IAAPVVAGQALAA 132 Query: 225 --GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA---LIISLPLLTILANF 276 G+ AE+G+M+I+EEIDA+ MG+ + L+S RI A +II L + I+ +F Sbjct: 133 TVGAGATAELGAMRISEEIDALEVMGIKSISYLVSTRIMAGFVVIIPLYAMAIIMSF 189 >gi|296165200|ref|ZP_06847747.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899389|gb|EFG78848.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 287 Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 63/107 (58%), Gaps = 3/107 (2%) Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G +GV VV+ ++ GA++ +G L+ G + + S++ RE+ L+ ++ A + Sbjct: 74 GTAGVAVVLGVT--VGALVGIEGYNFLNLLGLGPATGFVSSLVNTRELAPLMASLAFAMQ 131 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PL 269 G A++GSM+I EEIDA+ ++ + + L++ R+ A ++++ PL Sbjct: 132 GGCRFTAQLGSMRIAEEIDAMESIAIRPIPYLVTTRLIASVVAIVPL 178 >gi|118469400|ref|YP_885536.1| ABC transporter transmembrane protein [Mycobacterium smegmatis str. MC2 155] gi|118170687|gb|ABK71583.1| ABC-transporter integral membrane protein [Mycobacterium smegmatis str. MC2 155] Length = 285 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 62/107 (57%), Gaps = 3/107 (2%) Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G +GV VV+ I+ GA++ +G L G + + S++ RE+ + ++ A + Sbjct: 72 GTAGVAVVLGIT--VGALVGIEGYNFLDLLGLGPATGIISSLVNTRELAPIAASLAFATQ 129 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPL 269 +G A++GSM+I EEIDA+ ++ + + L++ R+ A +++ +PL Sbjct: 130 AGCRFTAQLGSMRIAEEIDALDSIAIRPIPYLVTTRLMAAVVAVIPL 176 >gi|41407948|ref|NP_960784.1| hypothetical protein MAP1850 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118466872|ref|YP_881589.1| ABC-transporter integral membrane protein [Mycobacterium avium 104] gi|254775058|ref|ZP_05216574.1| ABC-transporter integral membrane protein [Mycobacterium avium subsp. avium ATCC 25291] gi|41396302|gb|AAS04167.1| hypothetical protein MAP_1850 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118168159|gb|ABK69056.1| ABC-transporter integral membrane protein [Mycobacterium avium 104] Length = 287 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 60/107 (56%), Gaps = 3/107 (2%) Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G +GV VV+ GA++ +G L G + + S++ RE+ L+ ++ A + Sbjct: 74 GTAGVAVVL--GMTVGALVGIEGYNFLDLLGLGPATGFVSSLVNTRELAPLMASLAFAMQ 131 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL-PL 269 G A++GSM+I EEIDA+ ++ + + L++ R+ A ++++ PL Sbjct: 132 GGCRFTAQLGSMRIAEEIDAMESIAIRPIPYLVTTRLIASVVAIVPL 178 >gi|120401935|ref|YP_951764.1| hypothetical protein Mvan_0920 [Mycobacterium vanbaalenii PYR-1] gi|119954753|gb|ABM11758.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 255 Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust. Identities = 39/111 (35%), Positives = 67/111 (60%), Gaps = 4/111 (3%) Query: 157 IRQMYYVG-VSGVPVVIL-ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 I QM++V VS P V+L I F +V L +FGA FS + + +IG L Sbjct: 39 IFQMWFVARVSIFPTVMLSIPFTVLSVFIFN--ILLVEFGAADFSGAGAAFGAVTQIGPL 96 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 +T +++AG + +A+ A++G+ I EE+DA+R MG++ ++ L+ PR+ A ++ Sbjct: 97 VTVLVVAGAAATAMCADLGARTIREELDAMRVMGINPLQALVVPRVLATVV 147 >gi|254819658|ref|ZP_05224659.1| ABC-transporter integral membrane protein [Mycobacterium intracellulare ATCC 13950] Length = 281 Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 60/107 (56%), Gaps = 3/107 (2%) Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G +GV VV+ GA++ +G L G + + S++ RE+ L+ ++ A + Sbjct: 68 GTAGVAVVL--GMTVGALVGIEGYNFLDLLGLGPATGFVSSLVNTRELAPLMASLAFAMQ 125 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPL 269 G A++GSM+I EEIDA+ ++ + + L++ R+ A +++ +PL Sbjct: 126 GGCRFTAQLGSMRIAEEIDALESIAIRPIPYLVTTRLIASVVAIIPL 172 >gi|209545500|ref|YP_002277729.1| hypothetical protein Gdia_3388 [Gluconacetobacter diazotrophicus PAl 5] gi|209533177|gb|ACI53114.1| protein of unknown function DUF140 [Gluconacetobacter diazotrophicus PAl 5] Length = 296 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 2/102 (1%) Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFG-AEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 GV + + + G + Q A+ L G A++ L+S+L +REI +L +++ GRS Sbjct: 93 GGVLSTLFTATLAGLTVVSQAAYWLGFAGMAQMTGSILVSVL-VREIAPVLVGIILLGRS 151 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 G + EIG + + ++ A++ GLD +L+ PR +A + Sbjct: 152 GMLTLTEIGMLTLGGQVRAMQAQGLDPFLLLVMPRTFAFTVG 193 >gi|118466059|ref|YP_881723.1| TrnB2 protein [Mycobacterium avium 104] gi|118167346|gb|ABK68243.1| TrnB2 protein [Mycobacterium avium 104] Length = 294 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 94/197 (47%), Gaps = 6/197 (3%) Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG+ I Q LS G E S + L R L +A+ +A G+ A++G+M+I Sbjct: 93 TGSFIGIQLYRSLSDVGVEALSGFASAYLNTRFAAPLTSAIGLAATIGAGATAQLGAMRI 152 Query: 238 NEEIDAIRTMGLDFVRILISPRIWA-LIISLPL--LTILANFSAIIGASIVIWKYYDIPF 294 NEEIDA+ MG+ + L S RI A +++++PL L+ LA + A ++V+ + P Sbjct: 153 NEEIDALEVMGIRAISYLASTRIVAGVLVTVPLWCLSSLAGYLAT--RTLVVVAFGQAP- 209 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 V+ F++ ++ L++ A + +V GF +G+ V V S+ Sbjct: 210 GVYDHYFNTYLQPTDLIWSLLQVMATATVVMLVHTYYGFNATGGPAGVGEAVGRSVRASL 269 Query: 355 SIVIIIDSLFAIFYFAI 371 + + + A+ + + Sbjct: 270 VVAVTVQLAVAMAAYGV 286 >gi|254488593|ref|ZP_05101798.1| membrane protein [Roseobacter sp. GAI101] gi|214045462|gb|EEB86100.1| membrane protein [Roseobacter sp. GAI101] Length = 254 Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust. Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 10/117 (8%) Query: 153 LLSLIRQMYYVGVSG----------VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDL 202 L+ + R +Y G G +PVV L + TG + Q ++F AE + Sbjct: 26 LVHIFRPPFYAGQFGTALVQIGWLSLPVVGLTALFTGGALVMQIYAGGARFNAEAVVPQI 85 Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 ++I +RE+G +L +M+A R +AI AEI +MK+ E++DA+ T+ D +R L PR Sbjct: 86 VAIGMVRELGPVLVGLMVAARVTAAIAAEIATMKVTEQLDALITLSTDPMRYLTVPR 142 >gi|162148733|ref|YP_001603194.1| putative ABC transport system permease [Gluconacetobacter diazotrophicus PAl 5] gi|161787310|emb|CAP56904.1| putative ABC transport system permease protein [Gluconacetobacter diazotrophicus PAl 5] Length = 296 Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 2/102 (1%) Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFG-AEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 GV + + + G + Q A+ L G A++ L+S+L +REI +L +++ GRS Sbjct: 93 GGVLSTLFTATLAGLTVVSQAAYWLGFAGMAQMTGSILVSVL-VREIAPVLVGIILLGRS 151 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 G + EIG + + ++ A++ GLD +L+ PR +A + Sbjct: 152 GMLTLTEIGMLTLGGQVRAMQAQGLDPFLLLVMPRTFAFTVG 193 >gi|311743966|ref|ZP_07717772.1| ABC superfamily ATP binding cassette transporter, membrane protein [Aeromicrobium marinum DSM 15272] gi|311313096|gb|EFQ83007.1| ABC superfamily ATP binding cassette transporter, membrane protein [Aeromicrobium marinum DSM 15272] Length = 275 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 33/167 (19%), Positives = 84/167 (50%) Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263 +++ RE+ L+ A+ +A + G A++GSM+ +EEIDA+ M + + L++ R+ A Sbjct: 100 AVVNTRELAPLVAALALAAQVGCRFTAQLGSMRTSEEIDALSVMAVPAIPYLVTTRLIAS 159 Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323 ++++ L ++ + + + + + + P + F + L +I ++K A A Sbjct: 160 MLAILPLYMIGLVGSYLASQLAVTVLFGQPVGTYQHYFGTFIALEDIALSIVKVLVFAFA 219 Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + ++ GF + +G+ + SI +V++++ + + ++ Sbjct: 220 VTLIHCWYGFMASGGAEGVGEATGRAIRASIVVVVLLNMILTLVFWG 266 >gi|54027027|ref|YP_121269.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54018535|dbj|BAD59905.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 287 Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 13/153 (8%) Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL- 267 RE+ +L + A ++G A++GSM+I+EEIDA+ ++ + + L+S R+ A +++ Sbjct: 117 RELAPILATLAFAIQAGCRFTAQLGSMRISEEIDALESIAIRPLPYLVSTRMIAATLTIV 176 Query: 268 PLLTI------LANFSAII---GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318 PL TI LA +++ G S + +Y F + F S L + ++ A Sbjct: 177 PLYTIGLATAYLATKLSVLFLGGTSAGTYDHYFFQFLIGTDVFFS---LLKVVIFVLLAT 233 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 F+ C G VA VGV + K V +V Sbjct: 234 FIQCYYGYVATGGPEGVGVAAGRAIKMVIVVMV 266 >gi|262201470|ref|YP_003272678.1| hypothetical protein Gbro_1508 [Gordonia bronchialis DSM 43247] gi|262084817|gb|ACY20785.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247] Length = 286 Score = 44.7 bits (104), Expect = 0.025, Method: Compositional matrix adjust. Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 2/164 (1%) Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR-I 260 L +I RE+ ++ + +A + G+ A++G+M+I++EI A+ +M + + L + R I Sbjct: 108 LSAIANSRELAPVVVGIALAAKVGTGFTAQVGAMRISDEIAALDSMAIRSIPFLATTRMI 167 Query: 261 WALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320 A++ LP+ + S I +V+W Y + FH T ++ KA Sbjct: 168 AAMVCILPIYMVGLLASYIATRLVVVW-YNGESSGTYDYFFHLALTPTDLLYSATKAIVF 226 Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A + +V G+ +G+ + SI + I D +F Sbjct: 227 AAIVALVHCSYGYFASGGPEGVGQAAGRALRTSILAIGIFDVIF 270 >gi|251771004|gb|EES51588.1| probable ABC transporter, permease protein [Leptospirillum ferrodiazotrophum] Length = 211 Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 53/90 (58%), Gaps = 4/90 (4%) Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE--IFSIDLMSILQLREIGVLLTAVMIA 221 G+S +P++ +++ + GA + + +L + G + + +I L I + +G TA+++ Sbjct: 4 GLSALPIITVVALLVGAGVVAETGIELPKLGIQNLVGTIVLHVIFGI--VGPFATALIVI 61 Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 RS S + EIG+M+++ E+D I +G++ Sbjct: 62 ARSTSGLAVEIGNMRVSGELDTIEMLGVNL 91 >gi|296394453|ref|YP_003659337.1| hypothetical protein Srot_2050 [Segniliparus rotundus DSM 44985] gi|296181600|gb|ADG98506.1| protein of unknown function DUF140 [Segniliparus rotundus DSM 44985] Length = 290 Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 96/211 (45%), Gaps = 6/211 (2%) Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 VG + V+ ++ G VI +G LS F+ + + RE G L A+ A Sbjct: 74 VGGGTLSVLAVLGLSIGGVIGLEGYNALSIINIAPFTSFVSAYGMTREFGPLAAALGFAA 133 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRI---WALIISLPLLTILANFSAI 279 ++G I AEIG+M+I EEIDA+ G+ + +++ R+ A+I+ + LLT++ + A Sbjct: 134 QAGCRITAEIGAMRIAEEIDALEATGIRSIPFVVTTRVIAGVAVILPVYLLTLILGYEA- 192 Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339 S+V+ + + F ++ LIK A+ ++ +G+ Sbjct: 193 --CSLVVNVLHSQSSGTYDYNFSHFLVPRDVVLSLIKTAVFIVAVVMIHGYQGYYASGGP 250 Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +G + SI IV +++ +F++ Sbjct: 251 EGVGLASGRAIRSSIVIVTVLNMFLTLFFWG 281 >gi|41406191|ref|NP_959027.1| hypothetical protein MAP0093 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394539|gb|AAS02410.1| hypothetical protein MAP_0093 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 175 Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 50/84 (59%), Gaps = 2/84 (2%) Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G +GV VV+ F GA++A +G L+ G + + S++ RE+ ++ ++ A + Sbjct: 72 GTAGVAVVL--GFTAGALVAVEGYNFLNLLGLGPATGIISSLVNTRELAPIMASLAFAMQ 129 Query: 224 SGSAIVAEIGSMKINEEIDAIRTM 247 +G A++G+M+I EEIDA+ ++ Sbjct: 130 AGCRFTAQLGAMRIAEEIDALESL 153 >gi|330994287|ref|ZP_08318215.1| Protein trigalactosyldiacylglycerol 1 [Gluconacetobacter sp. SXCC-1] gi|329758754|gb|EGG75270.1| Protein trigalactosyldiacylglycerol 1 [Gluconacetobacter sp. SXCC-1] Length = 300 Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 54/97 (55%), Gaps = 2/97 (2%) Query: 171 VILISFVTGAVIAQQGAFQLSQFG-AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +++ + + G ++ Q A+ L G A++ L+S+L +REI +L +++ GRSG + Sbjct: 102 IVITATLAGLMVVSQAAYWLGYAGMAQMTGSILVSVL-VREISPILVGIILMGRSGMLSL 160 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 EIG M + E+ ++ G+D L+ PR +A + Sbjct: 161 TEIGMMVLGGEVRGLQARGIDPFLALVMPRTFAFTLG 197 >gi|226304400|ref|YP_002764358.1| YrbE family protein [Rhodococcus erythropolis PR4] gi|229494174|ref|ZP_04387937.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] gi|226183515|dbj|BAH31619.1| putative YrbE family protein [Rhodococcus erythropolis PR4] gi|229318536|gb|EEN84394.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] Length = 285 Score = 43.9 bits (102), Expect = 0.046, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 49/78 (62%), Gaps = 3/78 (3%) Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR-I 260 L ++ RE+ ++ A+ +A + G+ A+IG+M+I++EIDA+ +M + + L R I Sbjct: 107 LSAVANTRELAPVVVAIALAAKVGTGFTAQIGAMRISDEIDALDSMAIRSIPFLAGTRVI 166 Query: 261 WALIISLP--LLTILANF 276 A+I +P ++ +LA++ Sbjct: 167 AAMICVIPIYMIGLLASY 184 >gi|258541977|ref|YP_003187410.1| ABC transporter permease [Acetobacter pasteurianus IFO 3283-01] gi|256633055|dbj|BAH99030.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-01] gi|256636112|dbj|BAI02081.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-03] gi|256639167|dbj|BAI05129.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-07] gi|256642221|dbj|BAI08176.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-22] gi|256645276|dbj|BAI11224.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-26] gi|256648331|dbj|BAI14272.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-32] gi|256651384|dbj|BAI17318.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654375|dbj|BAI20302.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-12] Length = 299 Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust. Identities = 45/210 (21%), Positives = 91/210 (43%), Gaps = 19/210 (9%) Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 GV + +TG Q + L G + ++ + +REI +L +++ GR+G Sbjct: 97 GVSASLFAGMLTGVAAVSQVIYWLGLTGLAKMTGSILVNVVIREIAPILVGILLLGRNGM 156 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV- 285 E+G + I ++ +++++G+D +L+ PR A ++ L IL + S++I ++ Sbjct: 157 LSATELGLLTIGGQVRSMQSVGMDPFLMLVLPRTLAFTVAGFTLGILFSMSSLITGYVMS 216 Query: 286 ---------IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 IW + D A ++ L I G + C G+ A E Sbjct: 217 RISGVITNPIWTFLDDVAAAMSVTDYAVIPLKFIMVGFVVG-LGGCLTGLTATNE----- 270 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 +SL + + + IV+++ LF++ Sbjct: 271 ---DSLRTLLPRGFSRGMLIVMMVSVLFSL 297 >gi|329114262|ref|ZP_08243024.1| ABC Transporter Permease Protein [Acetobacter pomorum DM001] gi|326696338|gb|EGE48017.1| ABC Transporter Permease Protein [Acetobacter pomorum DM001] Length = 298 Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust. Identities = 45/211 (21%), Positives = 91/211 (43%), Gaps = 19/211 (9%) Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 GV + +TG Q + L G + ++ + +REI +L +++ GR+G Sbjct: 95 GGVSASLFAGMLTGVAAVSQVIYWLGLTGLAKMTGSILVNVVIREIAPILVGILLLGRNG 154 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 E+G + I ++ +++++G+D +L+ PR A ++ L IL + S++I ++ Sbjct: 155 MLSATELGLLTIGGQVRSMQSVGMDPFLLLVLPRTLAFTVAGFTLGILFSMSSLITGYVM 214 Query: 286 ----------IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 IW + D A ++ L I G + C G+ A E Sbjct: 215 SRISGVITNPIWTFLDDVAAAMSVTDYAIIPLKFIMVGFVVG-LGGCLTGLTATNE---- 269 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 +SL + + + IV+++ LF++ Sbjct: 270 ----DSLRTLLPRGFSRGMLIVMMVSVLFSL 296 >gi|169631591|ref|YP_001705240.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977] gi|169243558|emb|CAM64586.1| Putative YrbE family protein [Mycobacterium abscessus] Length = 285 Score = 43.5 bits (101), Expect = 0.055, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 62/107 (57%), Gaps = 3/107 (2%) Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G +GV +V+ ++ GA++A + L G + + S+ RE+ ++ ++ A + Sbjct: 72 GTAGVALVLGVT--AGALVAIESYNFLDLLGLGPATGIISSLASTRELAPIMASLAFAMQ 129 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPL 269 +G A++GSM+I EEIDA+ ++ + + L++ R+ A II+ +PL Sbjct: 130 AGCRFTAQLGSMRIAEEIDAMDSVAIRPIPFLVTTRLMAAIIAVIPL 176 >gi|324999479|ref|ZP_08120591.1| hypothetical protein PseP1_11961 [Pseudonocardia sp. P1] Length = 274 Score = 43.5 bits (101), Expect = 0.056, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 18/109 (16%) Query: 199 SIDLMSILQLREIGVLLTAVM-------------IAGRSGSAIVAEIGSMKINEEIDAIR 245 + D +S LQL +G +A++ +A GS A++G+M+++EEIDA+ Sbjct: 81 TFDALSDLQLEALGGFTSAIIAPRLLTPIIGGAALAATVGSGFTAQLGAMRVSEEIDALE 140 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 MG+ + L++ R+ A +I++ + +A IG WK + F Sbjct: 141 VMGVRSLPYLVTTRLVAGMITIIPIFAMAMVGGWIG-----WKLTQVNF 184 >gi|31747666|gb|AAO38315.1| Lfe134p2 [Leptospirillum ferrooxidans] Length = 138 Score = 43.1 bits (100), Expect = 0.065, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 69/133 (51%), Gaps = 1/133 (0%) Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 +G+M++ E+IDA ++ ++ L++PR++A + +LPLLT LA+ I G V Sbjct: 1 LGTMRVTEQIDAFTSLAVNPQTYLMTPRVFAGLTALPLLTALADLVGIAGGYFVAVILLG 60 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 +P + L + ++GL+K+ + +++ GF + +G+ VT VV Sbjct: 61 LPHNSYVRGIAEYVNLHDFYSGLVKSAVFGGLLSLLSCHMGFYASGGAAGVGRSVTVAVV 120 Query: 352 QSISIVIIIDSLF 364 S S+ I++ F Sbjct: 121 AS-SMAILVSDYF 132 >gi|108798620|ref|YP_638817.1| putative ABC transport system permease protein [Mycobacterium sp. MCS] gi|108769039|gb|ABG07761.1| putative ABC transport system permease protein [Mycobacterium sp. MCS] Length = 161 Score = 43.1 bits (100), Expect = 0.066, Method: Compositional matrix adjust. Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 15/136 (11%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI---------L 173 D QA G IS+T + A++Y+ + ++RQ+ +G+ + + Sbjct: 26 RDLGDQARFYGQSISSTVQ-AATTYRAE-----VLRQIAAIGLGAGSLAVVGGTVAVVAF 79 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 ++ T A +A Q Q+SQ G E + + + +R +A A G+ A++G Sbjct: 80 LNLSTSAALASQAYNQMSQVGVEALAGFTSAYVNVRLATPASSAFAFAATIGAGTTAQLG 139 Query: 234 SMKINEEIDAIRTMGL 249 +MKINEEIDA+ MG+ Sbjct: 140 AMKINEEIDALAVMGI 155 >gi|118619946|ref|YP_908278.1| integral membrane protein YrbE6B [Mycobacterium ulcerans Agy99] gi|118572056|gb|ABL06807.1| conserved hypothetical integral membrane protein YrbE6B [Mycobacterium ulcerans Agy99] Length = 288 Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust. Identities = 49/194 (25%), Positives = 87/194 (44%), Gaps = 22/194 (11%) Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA++A +G L+ G + + S++ RE+ ++ A+ A ++G +IG+M++ Sbjct: 88 GALVAIEGYNFLNMMGIGPATGVVSSLVTTRELAPIMAALGFAVQAGCRFTTQIGAMRVA 147 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ M + + L++ R+ A +++ L I A + I Y V F Sbjct: 148 EEIDALNAMAIRPIPYLVTTRLLASAVAIIPLYI---------ACLTI-SYLSCQLMVTF 197 Query: 299 SRFHSTATLANIFTGLIKAP-----------FMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + S + FT LI A F+A A +V GF +G Sbjct: 198 TTHGSVGPYLHYFTMLIDARDVGYSVIKAAVFVALA-SVVQCYYGFCAEGGPEGVGVAAG 256 Query: 348 TCVVQSISIVIIID 361 + SI++VII++ Sbjct: 257 HAMRASITVVIIVN 270 >gi|296115253|ref|ZP_06833894.1| putative ABC transport system permease protein [Gluconacetobacter hansenii ATCC 23769] gi|295978354|gb|EFG85091.1| putative ABC transport system permease protein [Gluconacetobacter hansenii ATCC 23769] Length = 302 Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 52/91 (57%), Gaps = 2/91 (2%) Query: 177 VTGAVIAQQGAFQLSQFG-AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 + G ++ Q A+ L G A++ L+S+L +REI +L +++ GRSG + +IG M Sbjct: 110 LAGLMVVSQAAYWLGFAGMAQMTGSILVSVL-VREITPILMGIILLGRSGMLSLTQIGLM 168 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIIS 266 +N ++ ++ GLD L+ PR +A ++ Sbjct: 169 VLNGQVRTMQARGLDPFLTLVMPRAFAFMVG 199 >gi|319951382|ref|ZP_08025207.1| YrbE family protein [Dietzia cinnamea P4] gi|319434979|gb|EFV90274.1| YrbE family protein [Dietzia cinnamea P4] Length = 187 Score = 42.7 bits (99), Expect = 0.080, Method: Compositional matrix adjust. Identities = 38/139 (27%), Positives = 75/139 (53%), Gaps = 12/139 (8%) Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS-LPL--LTILANFSAIIGASIVIW 287 ++G+M+++EEIDA+ M +D + L+S RI A +I+ +PL L ++A+F A A++ I+ Sbjct: 39 QLGAMRVSEEIDALEVMAIDSITYLVSTRIVAGMIAVVPLYSLAVIASFLASRFATVEIY 98 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF-----AVGVHSNSL 342 + +FS F +I ++A MA I ++ G+ GV S ++ Sbjct: 99 GQSGGVYDHYFSTFLIP---TDILWSFVQAIAMAITIMLIHTYYGYNAAGGPAGVGS-AV 154 Query: 343 GKKVTTCVVQSISIVIIID 361 G V T ++ +++ +++ Sbjct: 155 GNAVRTSLIAVVTVTLLVS 173 >gi|315442435|ref|YP_004075314.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|315260738|gb|ADT97479.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 284 Score = 42.7 bits (99), Expect = 0.091, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 56/99 (56%), Gaps = 2/99 (2%) Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G +GV +V+ I+ GA++ +G L G + + S++ RE+ + ++ A + Sbjct: 71 GTAGVAIVLGIT--VGALVGIEGYNFLDLLGLGPATGIISSLVNTRELAPIALSLAFATQ 128 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 +G A++GSM+I EEIDA+ ++ + + L++ R+ A Sbjct: 129 AGCRFTAQLGSMRIAEEIDALDSIAIRPIPYLVTTRLMA 167 >gi|330875117|gb|EGH09266.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. glycinea str. race 4] Length = 113 Score = 42.7 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 43/66 (65%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 L+RQ+Y VGV + ++++ G V+A QG L+++G+E ++++ LRE+G ++ Sbjct: 48 LVRQLYSVGVMSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVV 107 Query: 216 TAVMIA 221 TA++ A Sbjct: 108 TALLFA 113 >gi|169628784|ref|YP_001702433.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977] gi|169240751|emb|CAM61779.1| Putative YrbE family protein [Mycobacterium abscessus] Length = 272 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 25/92 (27%), Positives = 54/92 (58%), Gaps = 1/92 (1%) Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA++A +G L G + + S++ RE+ ++ A+ A ++G ++GSM+I Sbjct: 72 GALVAIEGYNFLELMGLGPATGVISSLVTTRELAPIMAALAFAVQAGCRFTTQLGSMRIA 131 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIIS-LPL 269 EE+DA+ ++ + + L++ R+ A +++ +PL Sbjct: 132 EEVDAMDSLAIRPIPYLVTTRLLASVVAIIPL 163 >gi|108757210|ref|YP_632090.1| hypothetical protein MXAN_3910 [Myxococcus xanthus DK 1622] gi|108461090|gb|ABF86275.1| putative membrane protein [Myxococcus xanthus DK 1622] Length = 248 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 47/70 (67%) Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 L +RE+G ++A++ A R+G+A AE+ +M +NE+++A+ D L++PR++A ++ Sbjct: 83 LLIRELGPAVSALLTASRAGAAHAAELSTMSVNEQVEALEMSAGDPYADLVAPRVFAGVM 142 Query: 266 SLPLLTILAN 275 +PLL IL Sbjct: 143 GVPLLCILGT 152 >gi|311741975|ref|ZP_07715785.1| ABC superfamily ATP binding cassette transporter membrane protein [Aeromicrobium marinum DSM 15272] gi|311314468|gb|EFQ84375.1| ABC superfamily ATP binding cassette transporter membrane protein [Aeromicrobium marinum DSM 15272] Length = 283 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 32/163 (19%), Positives = 73/163 (44%) Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268 RE ++ + + G+ A++G+M+++EEIDA+ M + + L++ RI A ++++ Sbjct: 114 REAAPIMACIALTATVGAGFTAQLGAMRVSEEIDALDVMAVPSIPYLVTTRIVAGMVAVV 173 Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328 L + + + +++ + + F + ++ +K A I V Sbjct: 174 PLFAIGLITMFLATQVMVTVAFGQATGTYQHYFDTFLVPGDVALAGVKVLLTAVVIMCVC 233 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 G+ +G+ V V S+ V+ ID +F I ++ + Sbjct: 234 CYYGYTASGGPAGVGRSVGRAVRTSLITVMSIDLVFGIAFWGV 276 >gi|125591222|gb|EAZ31572.1| hypothetical protein OsJ_15716 [Oryza sativa Japonica Group] Length = 322 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 25/134 (18%), Positives = 63/134 (47%) Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 ++E+ D +R +G V L+ PR+ A +++LP+LT+++ + ++ + + + + Sbjct: 177 PVSEQTDTLRVLGAQPVDYLVVPRVVACVLALPVLTLMSFALGLASSAFLADSIFGVSTS 236 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + ++ + L+K+ I +V+ G + +G+ T+ VV S+ Sbjct: 237 IILESARRALRPWDLISSLLKSQVFGAIIAVVSCAWGVTTHGGAKGVGESTTSAVVVSLV 296 Query: 356 IVIIIDSLFAIFYF 369 + + D + +F Sbjct: 297 GIFVADFALSCLFF 310 >gi|296141464|ref|YP_003648707.1| hypothetical protein Tpau_3790 [Tsukamurella paurometabola DSM 20162] gi|296029598|gb|ADG80368.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM 20162] Length = 284 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 49/88 (55%) Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 +GA +A + L+ G + + + +RE+ + + A ++G + A+IGSM+I Sbjct: 83 SGAAVAIEAYAGLNLIGFGPLTGVIGGLANIREMIPISAGIGFAAQAGCRMTAQIGSMRI 142 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALII 265 EEIDA+ +G+ + ++S R+ A I+ Sbjct: 143 AEEIDAVEALGIRSIPYVVSTRLIAGIV 170 >gi|148823178|ref|YP_001287932.1| integral membrane protein YrbE3a [Mycobacterium tuberculosis F11] gi|148721705|gb|ABR06330.1| hypothetical integral membrane protein yrbE3A [Mycobacterium tuberculosis F11] Length = 141 Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust. Identities = 35/139 (25%), Positives = 68/139 (48%), Gaps = 6/139 (4%) Query: 236 KINEEIDAIRTMGLDFVRILISPRIW-ALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 I EE+DA+R MG++ ++ L +PR+ A +SL L +++ + +IGA + Sbjct: 3 TIREELDALRVMGINPIQALAAPRVLAATTVSLALNSVVTA-TGLIGAFFCSVFLMHVSA 61 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 + + + ++ +IKA G++A +G +VG +G+ V VV + Sbjct: 62 GAWVTGLTTLTHTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAF 121 Query: 355 SIVIIIDSLFAIFYFAIGI 373 ++ +I+ I A+GI Sbjct: 122 IVLFVIN----IVVTAVGI 136 >gi|183980210|ref|YP_001848501.1| integral membrane protein YrbE6B [Mycobacterium marinum M] gi|183173536|gb|ACC38646.1| conserved hypothetical integral membrane protein YrbE6B [Mycobacterium marinum M] Length = 288 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 49/194 (25%), Positives = 86/194 (44%), Gaps = 22/194 (11%) Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA++A +G L+ G + S++ RE+ ++ A+ A ++G +IG+M++ Sbjct: 88 GALVAIEGYNFLNMMGIGPAIGVVSSLVTTRELAPIMAALGFAVQAGCRFTTQIGAMRVA 147 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ M + + L++ R+ A +++ L I A + I Y V F Sbjct: 148 EEIDALNAMAIRPIPYLVTTRLLASAVAIIPLYI---------ACLTI-SYLSCQLMVTF 197 Query: 299 SRFHSTATLANIFTGLIKAP-----------FMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + S + FT LI A F+A A +V GF +G Sbjct: 198 TTHGSVGPYLHYFTMLIDARDVGYSVIKAVVFVALA-SVVQCYYGFCAEGGPEGVGVAAG 256 Query: 348 TCVVQSISIVIIID 361 + SI++VII++ Sbjct: 257 HAMRASITVVIIVN 270 >gi|169631674|ref|YP_001705323.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977] gi|169243641|emb|CAM64669.1| Putative YrbE family protein [Mycobacterium abscessus] Length = 286 Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust. Identities = 20/70 (28%), Positives = 43/70 (61%) Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263 S++ RE+ ++ A+ A ++G A++G+ +INEEIDA+ + + + L++ R+ A Sbjct: 110 SLVSTRELAPVMAALAFAMQAGCRFTAQLGAQRINEEIDALDALAIRPIPYLVTTRLLAS 169 Query: 264 IISLPLLTIL 273 +++ L +L Sbjct: 170 TVAVVPLYLL 179 >gi|114328087|ref|YP_745244.1| ABC transporter permease [Granulibacter bethesdensis CGDNIH1] gi|114316261|gb|ABI62321.1| ABC transporter permease protein [Granulibacter bethesdensis CGDNIH1] Length = 273 Score = 39.7 bits (91), Expect = 0.69, Method: Compositional matrix adjust. Identities = 19/66 (28%), Positives = 38/66 (57%) Query: 201 DLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRI 260 +++ + LRE+ +L +++ GRSG +++E+G + N I + G+D ++I PR Sbjct: 105 TILATILLRELSPILVGIILLGRSGMPMISELGMLSANGHIRTLEAQGIDPFILIIVPRT 164 Query: 261 WALIIS 266 A +S Sbjct: 165 IAFTVS 170 >gi|74316998|ref|YP_314738.1| ABC-type transport system permease [Thiobacillus denitrificans ATCC 25259] gi|74056493|gb|AAZ96933.1| ABC-type transport system ipermease component [Thiobacillus denitrificans ATCC 25259] Length = 264 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 39/69 (56%) Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 FG F+ ++ + + E+ LTA+ +A RSGSAI E+ M++N E+DA+ + Sbjct: 86 DFGLTAFASEMTIRVLVLELLPFLTALFVALRSGSAINTEVALMQVNNELDALAHCKVPP 145 Query: 252 VRILISPRI 260 ++ PR+ Sbjct: 146 MQFEFLPRL 154 >gi|126433442|ref|YP_001069133.1| hypothetical protein Mjls_0833 [Mycobacterium sp. JLS] gi|126233242|gb|ABN96642.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 297 Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust. Identities = 15/29 (51%), Positives = 21/29 (72%) Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPR 259 + G+ I EE+DA+R MG+D VR L+ PR Sbjct: 151 DFGARAIREELDAMRVMGVDPVRQLVVPR 179 >gi|317508278|ref|ZP_07965958.1| hypothetical protein HMPREF9336_02330 [Segniliparus rugosus ATCC BAA-974] gi|316253453|gb|EFV12843.1| hypothetical protein HMPREF9336_02330 [Segniliparus rugosus ATCC BAA-974] Length = 290 Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust. Identities = 35/146 (23%), Positives = 68/146 (46%), Gaps = 6/146 (4%) Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRI---WALIISLPLLTILANFSAIIGASI 284 I AE+G+M+I EEIDA+ G+ + +++ R+ A+I+ + LLT++ + A S+ Sbjct: 139 ITAEVGAMRIAEEIDALEATGIRSIPFVVTTRVIAGIAVILPVYLLTLILGYEA---CSL 195 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 V+ + + F ++ LIK + IV +G+ +G Sbjct: 196 VVNLLNNQSAGTYNYYFMRFLVPQDVVLSLIKTAIFIVVVVIVHGYQGYYASGGPEGVGL 255 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370 + SI IV+I++ L + ++ Sbjct: 256 ASGRAIRSSIVIVVILNMLLTLLFWG 281 >gi|228962766|ref|ZP_04124032.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar pakistani str. T13001] gi|228796919|gb|EEM44263.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar pakistani str. T13001] Length = 106 Score = 37.4 bits (85), Expect = 3.6, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 3/51 (5%) Query: 41 IVDLSAITEIDTIGAELIMYFMEKYH---GKIKLQGVSTHIEQLFSLISFT 88 ++D+S +T +D+ G + M ++K H G +++ GVS+ I++LF L FT Sbjct: 46 VLDVSRVTYMDSTGLGVCMGLLKKVHKQDGFLEVTGVSSRIQRLFDLTGFT 96 >gi|150401176|ref|YP_001324942.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Methanococcus aeolicus Nankai-3] gi|150013879|gb|ABR56330.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Methanococcus aeolicus Nankai-3] Length = 449 Score = 37.4 bits (85), Expect = 4.3, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 71/174 (40%), Gaps = 28/174 (16%) Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 VIA G S F I IDL + +LR I + A S SA+VA G++ + E Sbjct: 108 VIATGG----SSFIPPIEGIDLEGVFKLRTIEDGMKIKEYAENSKSAVVAGAGAIGL-EM 162 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 A++ MGLD V I ++P++ + + + + + IG +I K P A Sbjct: 163 AYALKVMGLDVVVIEMAPQVLPRALDIDMAETVKKYLEDIGIKFIIGK----PLAKIIGE 218 Query: 301 FHSTATLAN---IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 A A+ I T +I A GV SN+ K+ C V Sbjct: 219 DKVRAIYADDREIDTDMII----------------LATGVRSNTELAKMAGCEV 256 >gi|219109650|ref|XP_002176579.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217411114|gb|EEC51042.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 1159 Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust. Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 7/88 (7%) Query: 41 IVDLSAITEIDTIGAEL---IMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97 ++DL+ +T IDT ++ I + K++ K+ L GVS ++ Q+ ++ + +K Sbjct: 845 VLDLTLVTGIDTSAVDVFSDIFSMVGKHNCKLFLSGVSNNLRQVMAMAGVKPESSVDRKK 904 Query: 98 PQRSFFYNSFKNLHYHIGKKIVKFINDS 125 Q F F NL IGK ++D+ Sbjct: 905 RQLRF----FSNLDTAIGKAEDMLLDDA 928 >gi|297697565|ref|XP_002825922.1| PREDICTED: tetratricopeptide repeat protein 23-like isoform 1 [Pongo abelii] gi|297697567|ref|XP_002825923.1| PREDICTED: tetratricopeptide repeat protein 23-like isoform 2 [Pongo abelii] Length = 447 Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust. Identities = 14/38 (36%), Positives = 25/38 (65%) Query: 74 VSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLH 111 +S H++++ + +S THRKK +N+ PQ + F + LH Sbjct: 9 ISDHLDEVVAAVSITHRKKFQNKLPQTALFQPPREKLH 46 >gi|324999497|ref|ZP_08120609.1| hypothetical protein PseP1_12051 [Pseudonocardia sp. P1] Length = 263 Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust. Identities = 14/26 (53%), Positives = 21/26 (80%) Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVR 253 + A++G+ KI +E+DA+R MGLD VR Sbjct: 112 LTADLGARKIRDELDAMRVMGLDPVR 137 >gi|86607080|ref|YP_475843.1| YjgP/YjgQ family protein [Synechococcus sp. JA-3-3Ab] gi|86555622|gb|ABD00580.1| putative membrane protein, YjgP/YjgQ family [Synechococcus sp. JA-3-3Ab] Length = 392 Score = 36.2 bits (82), Expect = 9.6, Method: Compositional matrix adjust. Identities = 41/143 (28%), Positives = 72/143 (50%), Gaps = 21/143 (14%) Query: 137 SNTGEFCASSYKFKGFLLS--LIRQM---YYVGVSGVPVVILIS--FVTGAVIAQQGAFQ 189 + TG F S K GF L L ++M +++GV+G V++L + F+ ++ ++GA Sbjct: 15 AQTGSFWGS-LKLGGFFLEFYLCKEMIRPFFLGVAGGTVMMLGNQLFIYADLLVKKGAPP 73 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L+ ++ IL L +L+ IAG + + +G M + EI A+R G+ Sbjct: 74 LT----------ILHILLLNLPAILVVTFPIAGLFATLLT--LGRMGADSEITALRAAGI 121 Query: 250 DFVRILISPRIWALIIS-LPLLT 271 + ++LI L++S L LLT Sbjct: 122 PYRKVLIPVLCIGLLVSGLALLT 144 >gi|301775065|ref|XP_002922953.1| PREDICTED: tetratricopeptide repeat protein 23-like [Ailuropoda melanoleuca] Length = 446 Score = 35.8 bits (81), Expect = 9.9, Method: Compositional matrix adjust. Identities = 15/38 (39%), Positives = 24/38 (63%) Query: 74 VSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLH 111 +S H++++ + +S T RKKI+NQ PQ F + LH Sbjct: 9 ISNHLDEIVAAVSITPRKKIQNQLPQTVLFQPPQEKLH 46 Searching..................................................done Results from round 2 >gi|254780138|ref|YP_003064551.1| ABC transporter [Candidatus Liberibacter asiaticus str. psy62] gi|254039815|gb|ACT56611.1| ABC transporter [Candidatus Liberibacter asiaticus str. psy62] Length = 373 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 373/373 (100%), Positives = 373/373 (100%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY Sbjct: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK Sbjct: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA Sbjct: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE Sbjct: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR Sbjct: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII Sbjct: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 Query: 361 DSLFAIFYFAIGI 373 DSLFAIFYFAIGI Sbjct: 361 DSLFAIFYFAIGI 373 >gi|92117460|ref|YP_577189.1| hypothetical protein Nham_1921 [Nitrobacter hamburgensis X14] gi|91800354|gb|ABE62729.1| protein of unknown function DUF140 [Nitrobacter hamburgensis X14] Length = 388 Score = 317 bits (814), Expect = 1e-84, Method: Composition-based stats. Identities = 135/375 (36%), Positives = 211/375 (56%), Gaps = 10/375 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S R G+W + + + + ++ S +D+S ++E+DT+GA L+ Sbjct: 21 SRGDALELRPDGSWIAANVIALETLADAVAPQVERAKSLKMDMSGLSELDTLGAWLLEKL 80 Query: 62 MEKYHG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + +++ GVS + L + +R K + N IG+ Sbjct: 81 SRRVASADHPVEVVGVSENYAGLIEEVRHVNRHNPPPPKAR-----NPVIAKVEEIGRSA 135 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 D +LG + + L SL+ Q+Y VG +P+++LI+F+ Sbjct: 136 WGSREDVAVFLQMLGSLCVALLGIIRKPRSLR--LTSLVYQLYRVGWQAIPIILLITFLI 193 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQG F +FGA+ + +D++ IL LRE+GVL+ A+M+AGRSGSA AE+GSMK+ Sbjct: 194 GAIIAQQGFFHFRKFGADSYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAELGSMKMR 253 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ TMGLD V +LI PR+ AL+ +LP+LT + + +A+ G +V W Y + ++F Sbjct: 254 EEIDALSTMGLDPVVVLILPRVLALVSALPILTFIGSMAALYGGGLVAWFYGGMGPSIFI 313 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 +R H ++ + G+IKAPFMA IGIVA EG V + SLGK+ TT VV+SI +VI Sbjct: 314 ARLHDAVSVTHFEVGMIKAPFMALVIGIVACSEGLRVKGSAESLGKQTTTSVVKSIFLVI 373 Query: 359 IIDSLFAIFYFAIGI 373 ++D LFA+F+ +IG+ Sbjct: 374 VLDGLFAVFFASIGM 388 >gi|85716130|ref|ZP_01047106.1| ABC transporter permease protein [Nitrobacter sp. Nb-311A] gi|85697129|gb|EAQ35011.1| ABC transporter permease protein [Nitrobacter sp. Nb-311A] Length = 370 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 136/373 (36%), Positives = 214/373 (57%), Gaps = 8/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S R G W + ++ + A + ++ S +D+S ++E+DT+GA L+ Sbjct: 5 SRGDALELRPDGFWIAANVTVLEALADAAAPQVERAKSLKMDMSGLSELDTLGAWLLEKL 64 Query: 62 MEKYHG-KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 + G ++ GVS + L + +R + K + N +G+ Sbjct: 65 SRQIAGHPAEIVGVSENYAGLIEEVRHVNRHNLPPPKAR-----NPVIAKVEEVGRAAWN 119 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 D +LG + + L SL+ Q+Y VG +P+++LI+F+ GA Sbjct: 120 SREDVAVFLQMLGSLCVALLGIIRKPRSLR--LTSLVYQLYRVGWQAIPIILLITFLIGA 177 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 +IAQQG F +FGA+ + +D++ IL LRE+GVL+ A+M+AGRSGSA AE+GSMK+ EE Sbjct: 178 IIAQQGFFHFRKFGADSYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAELGSMKMREE 237 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ TMGLD V +LI PR+ AL+++LP+LT + + +A+ G +V W Y + ++F +R Sbjct: 238 IDALSTMGLDPVVVLILPRVLALVLALPILTFIGSMAALYGGGLVAWFYGGMGPSIFIAR 297 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 H ++ + G+IKAPFMA IGIVA EG V + SLGK+ TT VV+SI +VI++ Sbjct: 298 LHDAVSVTHFQVGMIKAPFMALVIGIVACSEGLRVKGSAESLGKQTTTSVVKSIFLVIVL 357 Query: 361 DSLFAIFYFAIGI 373 D LFA+F+ +IG+ Sbjct: 358 DGLFAVFFASIGM 370 >gi|209885947|ref|YP_002289804.1| ABC transporter permease protein [Oligotropha carboxidovorans OM5] gi|209874143|gb|ACI93939.1| ABC transporter permease protein [Oligotropha carboxidovorans OM5] Length = 377 Score = 314 bits (806), Expect = 1e-83, Method: Composition-based stats. Identities = 145/373 (38%), Positives = 218/373 (58%), Gaps = 11/373 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G AG+W + ++S + V A + + + +D+SA+ EIDTIGA L+ + Sbjct: 13 DGRAQMYAAGSWTASQVSALEPAVEAATRTASGARALQLDMSAVNEIDTIGAWLLERMIR 72 Query: 64 ---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 + +IK G+S L + N P N Y IG+ V Sbjct: 73 HARQAGSEIKTVGISERFAGLIEELRSA------NLNPPVYEKQNPLLLKLYQIGQSTVS 126 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + + +LG + + + + L S I Q++ VG VP+++LI+F+ GA Sbjct: 127 SLQELLIFIDMLGRLGTVLARVILHPRRLR--LTSTIYQLHKVGWQAVPIIVLITFLIGA 184 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 +IAQQG F +FGA+ + +D++ IL LREIGVL+ A+M+AGRSGSA AE+GSMK+ EE Sbjct: 185 IIAQQGIFHFRKFGADAYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMREE 244 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ TMGLD + +LI PR+ ALII+LP+LT + + +A+ G ++ W Y D+ A F +R Sbjct: 245 IDALTTMGLDPLEVLILPRVIALIIALPILTFIGSIAALYGGGLISWLYGDMMPATFIAR 304 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 H ++ + GLIKAPFMA IGIVA EG V + SLG++ TT VV+SI +VI++ Sbjct: 305 LHEAVSVTHFEVGLIKAPFMALVIGIVASSEGLRVKGSAESLGRQTTTSVVKSIFLVIVL 364 Query: 361 DSLFAIFYFAIGI 373 D LFA+F+ +IG+ Sbjct: 365 DGLFAVFFASIGM 377 >gi|115523755|ref|YP_780666.1| hypothetical protein RPE_1737 [Rhodopseudomonas palustris BisA53] gi|115517702|gb|ABJ05686.1| protein of unknown function DUF140 [Rhodopseudomonas palustris BisA53] Length = 382 Score = 312 bits (799), Expect = 6e-83, Method: Composition-based stats. Identities = 135/375 (36%), Positives = 202/375 (53%), Gaps = 10/375 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + G+ R G+W + + + +DL+ + EIDT+GA L+ Sbjct: 15 DDAGVLQLRPGGSWTAGNAVVLERLFEEVSPQLQGVRGLRIDLAGVQEIDTLGAWLLEKM 74 Query: 62 MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + + +L GV L + +R P N +G+ Sbjct: 75 SRRAAQQGVSSELVGVDERHAGLIDEVRQVNRN-----APAPHPRGNFVLGWLDQLGRLT 129 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + +LG + + L SL Q+Y VG +P+++LI+F+ Sbjct: 130 WASRVEVLVFLQMLGALAVALLGVLRRPRSLR--LTSLFYQVYRVGWQAIPIMLLITFLI 187 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQG F +FGAE + +D++ IL LREIGVL+ A+M+AGRSGSA AE+GSMK+ Sbjct: 188 GAIIAQQGIFHFRKFGAESYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMR 247 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ TM LD V +LI PR+ ALII+LP+L+ L + +A+ G +V W Y + +F Sbjct: 248 EEIDALSTMDLDPVEVLILPRVLALIIALPILSFLGSMAALYGGGLVAWFYGGMSPTIFI 307 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 +R H ++ + G+IKAPFMA IGIVA EG V + SLG++ TT VV+SI VI Sbjct: 308 ARLHEAVSVTHFEVGIIKAPFMALVIGIVACSEGLRVKGSAESLGRQTTTSVVKSIFCVI 367 Query: 359 IIDSLFAIFYFAIGI 373 ++D LFA+F+ +IG+ Sbjct: 368 VLDGLFAVFFASIGM 382 >gi|85373087|ref|YP_457149.1| ABC-type transport system permease component [Erythrobacter litoralis HTCC2594] gi|84786170|gb|ABC62352.1| ABC-type transport system permease component [Erythrobacter litoralis HTCC2594] Length = 370 Score = 312 bits (799), Expect = 8e-83, Method: Composition-based stats. Identities = 121/371 (32%), Positives = 204/371 (54%), Gaps = 14/371 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G TV R AG + I I D+ ++++ + VDL +++IDT+GA + Sbjct: 12 QDDGTTVLRLAGPYLVSTIGPIDQDL-----RALEGGFSAVDLGDVSQIDTVGAWMACTV 66 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + +I+ S +L + + K + F+ + G+++V+F Sbjct: 67 AGAHDAEIR--NASDRASRLIDAVQGSINKAETTPE-----RDPLFRRVAMMTGERVVEF 119 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 ++ G +++ G +F +L RQ+ VG++ +P++ L+SF+ G V Sbjct: 120 GHNLLDLLSFAGAIVAGFGRLLLHPGRFPH--KALFRQLELVGINALPIIGLMSFLIGIV 177 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IAQQGA QL QFGAE +++L+ + +RE+GVL+TA+M+AGRSGSA A+IG+MK+ EE+ Sbjct: 178 IAQQGAVQLEQFGAETLTVNLVGRITMRELGVLMTAIMVAGRSGSAFAAQIGTMKLTEEV 237 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+RT+G+ V L+ PRI A ++ +PLL + AI+G ++V IPF F R Sbjct: 238 DAMRTIGISPVEALVLPRILAAVLMMPLLGFYSACVAIVGGAVVSEFALGIPFWNFLERI 297 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 +++ GLIKAP + + +G V +S +G + T VVQ+I +VI++D Sbjct: 298 QDVVPTYDLWVGLIKAPVFGLIVALAGCYQGMQVRGNSEEVGSRTTKAVVQAIFMVIVLD 357 Query: 362 SLFAIFYFAIG 372 + FA+F+ IG Sbjct: 358 AFFAVFFTEIG 368 >gi|86357964|ref|YP_469856.1| ABC transporter permease [Rhizobium etli CFN 42] gi|86282066|gb|ABC91129.1| probable ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 389 Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats. Identities = 154/373 (41%), Positives = 230/373 (61%), Gaps = 11/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S+ R +GNW+S + + + + ++ + +DLS +++IDT G L+ Sbjct: 23 SDGSGQHVRLSGNWRSAYVHLVLHEFEKLQRE--KTGNLTLDLSDVSDIDTAGIWLLCRL 80 Query: 62 M---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 E ++ G + HI+++ + S K +P++ + + +GK Sbjct: 81 KKQEEAAGRTVRFVGTNPHIDEMLEMFSEEPAK----PEPEQKEKVSLAARILAPLGKMT 136 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 ++ + +ILG + S++ Q+ ++GV VP+++L+SF+ Sbjct: 137 YDIWDNLAASMYILGSAVRGAQMKLGRGS--GVSPASIVNQIDHMGVRAVPIILLMSFLI 194 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ Sbjct: 195 GAIIAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMR 254 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA++ MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA++V W Y I FA F Sbjct: 255 EEIDALKVMGLNPIGVLIFPRLVALTIALPLLTVLANFASLAGAAVVAWGYSGITFANFL 314 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 +R H TL+ + +G+IKAPFMA IGIVA EG VG + SLG+ VT VV++I +VI Sbjct: 315 ARLHEAITLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTASVVKAIFVVI 374 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 375 LMDGLFAMFYAAI 387 >gi|299132338|ref|ZP_07025533.1| protein of unknown function DUF140 [Afipia sp. 1NLS2] gi|298592475|gb|EFI52675.1| protein of unknown function DUF140 [Afipia sp. 1NLS2] Length = 377 Score = 310 bits (794), Expect = 3e-82, Method: Composition-based stats. Identities = 140/373 (37%), Positives = 218/373 (58%), Gaps = 11/373 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G AG+W + ++S + V AI+ + +D+SA+ +IDTIGA L+ + Sbjct: 13 DGSAQLYAAGSWTASQVSSLEPVVNAAIHNVSGARVLQLDMSAVDQIDTIGAWLLERMIR 72 Query: 64 KYHG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 + H +I+ G+ L + N P N+ Y IG+ V Sbjct: 73 RVHQAGSEIRTVGIHERFAGLIDELRSV------NLHPPVHERQNAVLLKLYQIGQSTVA 126 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + + +LG + S + + L S I Q++ VG VP++++I+F+ GA Sbjct: 127 SLQELLVFLEMLGRLGSVLARLAFKPSRLR--LTSTIYQLHKVGWQAVPIMVMITFLIGA 184 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 +IAQQG F +FGA+ + +D++ IL LREIGVL+ A+M+AGRSGSA AE+GSMK+ EE Sbjct: 185 IIAQQGIFHFRKFGADAYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMREE 244 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ TMGLD + +L+ PR+ AL+I+LP+L + + +A+ G ++ W Y + A+F +R Sbjct: 245 IDALTTMGLDPLEVLVLPRVLALVIALPILAFIGSIAALYGGGLISWLYGGMSPAIFIAR 304 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 H ++ + GLIKAPFMA IGIVA EG V + SLG++ TT VV+SI +VI++ Sbjct: 305 LHEAVSVTHFEVGLIKAPFMALVIGIVASSEGLRVKGSAESLGRQTTTSVVKSIFLVIVL 364 Query: 361 DSLFAIFYFAIGI 373 D LFA+F+ +IG+ Sbjct: 365 DGLFAVFFASIGM 377 >gi|152992948|ref|YP_001358669.1| ABC transporter, permease [Sulfurovum sp. NBC37-1] gi|151424809|dbj|BAF72312.1| ABC transporter, permease [Sulfurovum sp. NBC37-1] Length = 367 Score = 309 bits (792), Expect = 5e-82, Method: Composition-based stats. Identities = 115/363 (31%), Positives = 184/363 (50%), Gaps = 18/363 (4%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK--IK 70 G W + EI + + S + DLS + D+ G L M + +K K ++ Sbjct: 21 GEWTLATVPEIEKE----LKGIPMGKSVLWDLSGVEAFDSAGVLLFMEYYDKLKQKNAVE 76 Query: 71 LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAH 130 L G S ++++ L+ +K+ +K + +GK + + D Sbjct: 77 LVGYSESQKEMYDLLRKHMIEKVPERK----------TSFFEELGKSTLVVLGDIKDLIT 126 Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190 LG + + + ++ +++ G + + ++ L SF+ G VIA QGA QL Sbjct: 127 FLGHLFFTLFNVLFHPRNIR--IKEMVYHIHHSGFNALMIIGLTSFLVGMVIAYQGAVQL 184 Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 ++FGA+IF +D + I +RE+G L+TA++IAGRSGSA AEIG+MKI EEI A+RTMG D Sbjct: 185 AKFGADIFIVDTVGISMVRELGPLMTAIVIAGRSGSAYTAEIGAMKITEEIAAMRTMGFD 244 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 L+ PRI+ALI++LPLL ++ I G + +I A F R + + + Sbjct: 245 PYNFLVMPRIFALIVALPLLIFFSDIMGIFGGMVASQMELNISMAQFVDRLNEVLEVKHY 304 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+IK P A I + GF V ++ SLG + T VV SI +VI D+LF++ Y Sbjct: 305 ILGMIKGPVFAFVIAAIGCFRGFQVSDNTESLGLQTTASVVNSIFLVIAFDALFSVIYTE 364 Query: 371 IGI 373 + + Sbjct: 365 LNL 367 >gi|39937024|ref|NP_949300.1| hypothetical protein RPA3963 [Rhodopseudomonas palustris CGA009] gi|192292851|ref|YP_001993456.1| hypothetical protein Rpal_4485 [Rhodopseudomonas palustris TIE-1] gi|39650881|emb|CAE29404.1| putative permease of ABC transporter [Rhodopseudomonas palustris CGA009] gi|192286600|gb|ACF02981.1| protein of unknown function DUF140 [Rhodopseudomonas palustris TIE-1] Length = 383 Score = 308 bits (790), Expect = 7e-82, Method: Composition-based stats. Identities = 131/373 (35%), Positives = 199/373 (53%), Gaps = 5/373 (1%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 ++ +G+W + + V A + +D+S I +DT GA LI Sbjct: 16 IARGEGLALCASGSWTARFAPALERLVTEAEQLGGSKPNVSIDVSGIARLDTFGAWLIER 75 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 ++ SL+ + +P+R S + +G+ I Sbjct: 76 LRRNLGQDGTEARIAGLSTNYASLVDEVRQVSEAGPEPRRG---GSLRAPIERLGRTIYA 132 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 FI+D + ++G V++ F+ L S + + V VP+++LI+F+ G Sbjct: 133 FIDDIVALISMMGAVLAGVLRVVVRPTSFR--LTSTVHHLEQVCWRAVPIIVLITFLIGC 190 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 +IAQQG F +FGA++F +D++ +L LREIGVLL ++M+AGRSGSA AE+GSMK+ EE Sbjct: 191 IIAQQGIFHFRKFGADVFVVDMLGVLVLREIGVLLVSIMVAGRSGSAYTAELGSMKMREE 250 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+RTMG D + +LI PR+ AL++++P+LT L SA+ G +V W Y + F R Sbjct: 251 IDALRTMGFDPIDVLIVPRLIALVLAVPILTFLGAMSALYGGGLVAWMYGGVDPEAFLLR 310 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 ++ + G+IKAP MA IGIVA EG AV + SLG T VV+SI VI++ Sbjct: 311 LRDAISIDHFTVGMIKAPVMAVVIGIVACVEGLAVQGSAESLGSHTTASVVKSIFFVIVM 370 Query: 361 DSLFAIFYFAIGI 373 D +FAIF+ IGI Sbjct: 371 DGVFAIFFAGIGI 383 >gi|292490603|ref|YP_003526042.1| hypothetical protein Nhal_0469 [Nitrosococcus halophilus Nc4] gi|291579198|gb|ADE13655.1| protein of unknown function DUF140 [Nitrosococcus halophilus Nc4] Length = 380 Score = 308 bits (789), Expect = 1e-81, Method: Composition-based stats. Identities = 108/374 (28%), Positives = 190/374 (50%), Gaps = 16/374 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + + R G W IS++ + ++ VD S IT++DT GA L+ + Sbjct: 20 DPATSTLRCLGTWTLYGISQLEQTLPLS---QSHPPVHAVDASGITQMDTGGAWLLQRLL 76 Query: 63 EKYHGKIKL---QGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 + + +G+ ++L L+ + P + IG+ Sbjct: 77 ADLEQQTRPIPCKGLGQEQQKLLRLVQGGSTSQQLTTAPPP--------GILERIGRLSW 128 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + ++ S +G + A + + + + G++ +P+V L+ F+ G Sbjct: 129 AHVEEALSFLAFIGETLLYFLRSMAHPSRIR--WRPFLSNLQTAGINALPIVGLLIFLVG 186 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A QG QL +GA IF ++L+++ +RE+ L+ A++IAGR+GSA A+IG+M++ E Sbjct: 187 VVLAYQGGIQLRAYGANIFIVELVTLTMVRELAPLMAAIIIAGRTGSAFTAQIGTMQVTE 246 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDA+RT+G+ + L+ P+I+AL+++LPLLT+ A+ I G ++ ++ F F Sbjct: 247 EIDALRTLGIPPMEQLVLPKIFALVLALPLLTVFADMVGIFGGMVMSQALLEVEFREFAQ 306 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 R L++ G+ KAP A I V +GF VG + S+G+ TT VVQ+I +VII Sbjct: 307 RIPEVVPLSSFLIGVGKAPVFAVIIATVGCYQGFRVGGGAESVGRHTTTSVVQAIFLVII 366 Query: 360 IDSLFAIFYFAIGI 373 D+ F+I + +GI Sbjct: 367 ADATFSILFSWLGI 380 >gi|241204915|ref|YP_002976011.1| hypothetical protein Rleg_2195 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858805|gb|ACS56472.1| protein of unknown function DUF140 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 394 Score = 307 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 161/373 (43%), Positives = 233/373 (62%), Gaps = 11/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++ R GNW+S I + D + K ++ VDLS I+EIDT G L+ Sbjct: 28 ADGSGQRVRLQGNWRSAYIHLVLRDFEKLLQK--KTGDLTVDLSDISEIDTAGIWLLCRL 85 Query: 62 M---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 E ++ +G ++HI+++ ++S K +P+++ + + IGK Sbjct: 86 KKQEEAGGRTVRFEGTNSHIDEMLEMVSEEPAKV----EPEQTEKVSLAARIFAPIGKMT 141 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ++ + +ILG + S++ Q+ ++GV VP+++L+SF+ Sbjct: 142 YEVWDNFAAAMYILGSAVRGAQMKFGRGS--GVSPASIVNQIDHMGVRAVPIILLMSFLI 199 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ Sbjct: 200 GAIIAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMR 259 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA++ MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA+ V W Y I FA F Sbjct: 260 EEIDALKVMGLNPIGVLIFPRLVALTIALPLLTVLANFASLGGAAAVAWGYSGITFANFL 319 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H TL+ + +G+IKAPFMA IGIVA EG VG + SLG+ VT VV++I +VI Sbjct: 320 SRLHEAVTLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTAAVVKAIFVVI 379 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 380 LMDGLFAMFYAAI 392 >gi|146342154|ref|YP_001207202.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146194960|emb|CAL78985.1| putative ABC transporter (permease protein) [Bradyrhizobium sp. ORS278] Length = 378 Score = 307 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 136/375 (36%), Positives = 214/375 (57%), Gaps = 10/375 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + + R +G+W S ++++ A K + +DL +++EIDT+GA LI Sbjct: 11 ATEEVLELRASGSWVSRNVTQLESLTGSACAKLGHAGIVRLDLGSVSEIDTVGAWLIEKL 70 Query: 62 MEKYH---GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + ++++ GV+ L + +R++I + N +G+ Sbjct: 71 SRRAGVGGRRVEMTGVAASYSGLVDEVRQVNRREIA-----PAPRPNPIVARLTDLGRST 125 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + D +L + + + SL+ QMY +G +P+V+LI+F+ Sbjct: 126 MGAAKDVTIFLDMLAALSFALVRTLRRPRSLR--VTSLVYQMYRIGWQAIPIVVLITFLI 183 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQG F +FGAE + +D++ IL LRE+GVL+ A+M+AGRSGSA AEIGSMK+ Sbjct: 184 GAIIAQQGIFHFRRFGAESYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAEIGSMKMR 243 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ TMGLD V +LI PRI ALI++LP+L + + +A+ G +V Y + +F Sbjct: 244 EEIDALVTMGLDPVEVLILPRIVALILTLPILAFIGSMAALYGGGLVAQLYGGMGPPIFI 303 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 +R H ++ + G++KAPFMA IGIVA EG V + SLG++ TT VV+SI +VI Sbjct: 304 ARLHEAISVTHFEVGMLKAPFMALVIGIVACSEGLRVKGSAESLGQQTTTSVVKSIFLVI 363 Query: 359 IIDSLFAIFYFAIGI 373 ++D LFAIF+ +IG+ Sbjct: 364 VLDGLFAIFFASIGM 378 >gi|316935525|ref|YP_004110507.1| hypothetical protein Rpdx1_4222 [Rhodopseudomonas palustris DX-1] gi|315603239|gb|ADU45774.1| protein of unknown function DUF140 [Rhodopseudomonas palustris DX-1] Length = 383 Score = 307 bits (787), Expect = 2e-81, Method: Composition-based stats. Identities = 126/376 (33%), Positives = 202/376 (53%), Gaps = 11/376 (2%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 ++ +G+W + + V A +D+S I +DT GA LI Sbjct: 16 IARAEGLALCASGSWTARFAPVLERLVTEAEQLGGSKPDVFIDVSGIARLDTFGAWLIER 75 Query: 61 FME---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 + + ++ G+S + L + ++ + + +G+ Sbjct: 76 LRRNLGQAGAEARIAGLSANYASLVDEVRQVSETGPAPKR------GGALRAPIERLGRT 129 Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + F +D + ++G V++ G F+ L S + + V + VP+++LI+F+ Sbjct: 130 MYAFFDDIVALISMMGAVLAGLGRIVIRPTSFR--LTSTVHHLEQVCWNAVPIILLITFL 187 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G ++AQQG F +FGA++F +D++ +L LRE+GVLL A+M+AGRSGSA AE+GSMK+ Sbjct: 188 IGCIVAQQGIFHFRKFGADVFVVDMLGVLVLRELGVLLVAIMVAGRSGSAYTAELGSMKM 247 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EEIDA+RTMG D + +LI PR+ AL++++P+LT L +A+ G +V W Y + F Sbjct: 248 REEIDALRTMGFDPIDVLIVPRLIALVLAVPILTFLGAMAALYGGGLVAWLYGGVDPEAF 307 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 R ++ + G+IKAP MA IGIVA EG AV + SLG+ T VV+SI V Sbjct: 308 LLRLRDAISIDHFTVGMIKAPVMAAVIGIVACVEGLAVQGSAESLGRHTTASVVKSIFFV 367 Query: 358 IIIDSLFAIFYFAIGI 373 I++D +FAIF+ IGI Sbjct: 368 IVMDGVFAIFFAGIGI 383 >gi|209964745|ref|YP_002297660.1| ABC transporter, permease protein, putative [Rhodospirillum centenum SW] gi|209958211|gb|ACI98847.1| ABC transporter, permease protein, putative [Rhodospirillum centenum SW] Length = 384 Score = 307 bits (787), Expect = 2e-81, Method: Composition-based stats. Identities = 124/369 (33%), Positives = 196/369 (53%), Gaps = 11/369 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 V G W + + D + + S +DLS + +DT GA LI E+ Sbjct: 24 VLAAGGRWDLSAVPRL-DQRLRTAGPDRPASSVCIDLSGLVALDTAGALLIDRLAERLRA 82 Query: 68 K---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + + + G + L + R Y +L +G+ V+ D Sbjct: 83 EGHTVAIVGARPDLCALLREVRRASRADSPALP-----RYEPMHDLLERVGRATVEAGQD 137 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + LG+V +F+ + + + VG++ +P+V L+SF+ G V+A Sbjct: 138 AAKLLGFLGMVTVTALRLVRQPRRFR--MTPFVFHLEQVGLNALPIVGLLSFLIGIVLAY 195 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QGA QL FGAEIF ++L+ I LREIG+L+T++++AGRSGSA A+IG+MK+N+E+DA+ Sbjct: 196 QGADQLRLFGAEIFVVNLLGIGVLREIGILMTSIIVAGRSGSAFTAQIGTMKVNQEVDAM 255 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 RT+GLD V +L+ PR+ AL+++LPLL AN A+ G +++ + Y DI F F + Sbjct: 256 RTLGLDPVELLVLPRLLALMVALPLLGFYANVVALFGGAVMAYSYLDITFGQFLKQLQLA 315 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +F GL+KAP A I +V EG V + S+G+ T VV SI +VI++D+LF Sbjct: 316 VNETTLFVGLVKAPVFAIVIALVGCYEGLRVTGSAQSVGQLTTRSVVVSIFLVIVLDALF 375 Query: 365 AIFYFAIGI 373 +I + +GI Sbjct: 376 SILFSYLGI 384 >gi|116252407|ref|YP_768245.1| transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115257055|emb|CAK08149.1| putative transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 389 Score = 307 bits (787), Expect = 2e-81, Method: Composition-based stats. Identities = 161/373 (43%), Positives = 232/373 (62%), Gaps = 11/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++ R GNW+S I + D + K ++ VDLS I+EIDT G L+ Sbjct: 23 ADGSGQRVRLQGNWRSAYIHLVLRDFEKLLQK--KTGDLSVDLSDISEIDTAGIWLLCRL 80 Query: 62 M---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 E ++ +G ++HI+++ + S K +P+++ + + IGK Sbjct: 81 KKQEEAGGRTVRFEGTNSHIDEMLEMFSEEPAKV----EPEQTEKVSLAARIFAPIGKMT 136 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ++ + +ILG + S++ Q+ ++GV VP+++L+SF+ Sbjct: 137 YEVWDNFAAAMYILGSAVRGAQMKFGRGS--GVSPASIVNQIDHMGVRAVPIILLMSFLI 194 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ Sbjct: 195 GAIIAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMR 254 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA++ MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA+ V W Y I FA F Sbjct: 255 EEIDALKVMGLNPIGVLIFPRLVALTIALPLLTVLANFASLGGAAAVAWGYSGITFANFL 314 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H TL+ + +G+IKAPFMA IGIVA EG VG + SLG+ VT VV++I +VI Sbjct: 315 SRLHEAVTLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTAAVVKAIFVVI 374 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 375 LMDGLFAMFYAAI 387 >gi|119945392|ref|YP_943072.1| hypothetical protein Ping_1681 [Psychromonas ingrahamii 37] gi|119863996|gb|ABM03473.1| hypothetical protein DUF140 [Psychromonas ingrahamii 37] Length = 383 Score = 306 bits (785), Expect = 3e-81, Method: Composition-based stats. Identities = 110/373 (29%), Positives = 187/373 (50%), Gaps = 10/373 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY--- 60 +G +FR G+W + + + + + + S D+S + ++D+ G L ++ Sbjct: 18 SGSILFRCQGDWTAKALQNVLRYLEK-EAGILFNMSVQWDVSGVGKVDSAGIMLYIHYHD 76 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 ++ H ++L G + + L+ L+ R + Q + + +IGK Sbjct: 77 LLKLQHCTVELTGARSEYQNLYQLL----RSHVSQQAVSKPGLLSRLLLPFTNIGKSTEN 132 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 D +G + + S+++ + GV +P+V L S + G Sbjct: 133 LWRDINDFLTFIGEHSAALLTSLRHPSSIR--YASIVKNIEEAGVRALPIVALTSCLIGV 190 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 VI Q A QL +FGA IF +D++ I RE+ L+TA+++AGR+GS+ A++G+M I EE Sbjct: 191 VITYQSALQLQKFGANIFIVDMIGISVTRELAPLITAIVVAGRTGSSYTAQLGAMTITEE 250 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 I A+RTMG + R L+ PRI AL+I +PLL + A+ I G IV + +I +A F R Sbjct: 251 ISAMRTMGFEPHRFLVLPRIIALMIVMPLLILFADVIGIAGGMIVSNIHLNISYAEFIHR 310 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + +++ GL K PF A I I GF V ++ SLG+ T VV +I +VI Sbjct: 311 LQHVLDIKHLWIGLFKGPFFAWLIAITGCFRGFQVASNTESLGRYTTISVVNAIFLVIAC 370 Query: 361 DSLFAIFYFAIGI 373 D+LF++ + +G+ Sbjct: 371 DALFSVIFTELGL 383 >gi|222086200|ref|YP_002544732.1| ABC transporter [Agrobacterium radiobacter K84] gi|221723648|gb|ACM26804.1| ABC transporter [Agrobacterium radiobacter K84] Length = 386 Score = 306 bits (785), Expect = 3e-81, Method: Composition-based stats. Identities = 154/372 (41%), Positives = 232/372 (62%), Gaps = 10/372 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +R GNW+S + + + +S ++DLS ++++DT GA LI Sbjct: 20 DGNGHRYRLEGNWRSANVHGVLRRIDELTTRSAGGR-VVIDLSDLSDVDTAGALLIRRLK 78 Query: 63 E---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 E + + ++G ++HI++L + + +KP+ + + + IG+ + Sbjct: 79 ESQEAHGASVSIEGSNSHIDELLTAF----TEDPDAEKPEPRQKKSWTERIFAPIGETVY 134 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + + + +ILG + S++ Q+ ++GV VP+++L+S++ G Sbjct: 135 EVWGNLVAAMYILGSAVRGAQLKFGRGS--GVSPASIVNQIDHMGVRAVPIILLMSYLIG 192 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 A+IAQQGAFQL FGAE+F +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ E Sbjct: 193 AIIAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMRE 252 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DA++ MGL+ + +LI PR+ AL ++LPLLTILANF+++ GA+ V W Y I FA F + Sbjct: 253 EVDALKVMGLNPIGVLIFPRLVALTVALPLLTILANFASLFGAATVTWAYSGITFATFIA 312 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 R H +L+ + +G+IKAPFMA IGIVA EG VG + SLG+ VT VV+SI +VI+ Sbjct: 313 RLHEAISLSTVISGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTASVVKSIFVVIL 372 Query: 360 IDSLFAIFYFAI 371 +D LFA+FY AI Sbjct: 373 MDGLFAMFYAAI 384 >gi|323136828|ref|ZP_08071909.1| protein of unknown function DUF140 [Methylocystis sp. ATCC 49242] gi|322398145|gb|EFY00666.1| protein of unknown function DUF140 [Methylocystis sp. ATCC 49242] Length = 380 Score = 306 bits (784), Expect = 4e-81, Method: Composition-based stats. Identities = 131/368 (35%), Positives = 206/368 (55%), Gaps = 5/368 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 NG +G+W + +++ + +DLS + ++DT GA LI Sbjct: 16 NGGERLALSGDWILIASRRLEQKAQQLVDEGGRVKFVTIDLSGVEKLDTAGAWLINRARH 75 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + ++ + +++ ++ + +R +N+ +L +G +V + Sbjct: 76 ELAHADVGVALAHARPEHHTMLEEAAFREFEKPPRRR---FNAIVDLLADLGASVVDALR 132 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 + LG I+ F+ SL+ M +G P+++LI+ + GA++A Sbjct: 133 EFYRGVAFLGEFIAAMAYVATHPGHFR--FTSLVFHMETIGFRSAPIIVLINLLVGAIVA 190 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 QQG FQL +FGA +++ L+ IL LRE+GVLLT++MIAGRSGSAI AEIGSMK+ EEIDA Sbjct: 191 QQGIFQLLKFGASSYTVSLIGILVLRELGVLLTSIMIAGRSGSAITAEIGSMKMREEIDA 250 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R MGL + +LI+PR+ ALI+SLP+LT +A+ +A+ G +V W Y I A F S Sbjct: 251 LRVMGLSPIEVLIAPRVLALIVSLPILTFIADMAALFGGLLVSWSYGGISPAAFLSLLKE 310 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 L G+IKAPFMA IG++A +G + SLG++VT+ VV+SI +VI++D L Sbjct: 311 AIALHTFLVGMIKAPFMALVIGLIAAMDGLETKGSAESLGRQVTSSVVKSIFMVIVLDGL 370 Query: 364 FAIFYFAI 371 FAIF+ +I Sbjct: 371 FAIFFASI 378 >gi|209549578|ref|YP_002281495.1| hypothetical protein Rleg2_1984 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535334|gb|ACI55269.1| protein of unknown function DUF140 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 383 Score = 305 bits (782), Expect = 7e-81, Method: Composition-based stats. Identities = 158/367 (43%), Positives = 227/367 (61%), Gaps = 11/367 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EK 64 R GNW+S + + D +++ ++ VDLS IT+IDT G L+ E Sbjct: 23 HVRLKGNWRSAYVHFVLRDFEKLLHQ--KAGDLTVDLSDITDIDTAGIWLLCRLKKEEEA 80 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 ++ +G + HI+++ + S K +P+ + + IG+ ++ Sbjct: 81 AGRTVRFEGTNPHIDEMLEMFSEEPAK----PEPELKEKVSLAARILAPIGRMTYDIWDN 136 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + +ILG + S++ Q+ ++GV VP+++L+SF+ GA+IAQ Sbjct: 137 FAAAMYILGSAVRGAQMKFGRGS--GVSPASIVNQIDHMGVRAVPIILLMSFLIGAIIAQ 194 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QGAFQL FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ EEIDA+ Sbjct: 195 QGAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMREEIDAL 254 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 + MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA+ V W Y I FA F SR H Sbjct: 255 KVMGLNPIGVLIFPRLVALTIALPLLTVLANFASLAGAAAVAWGYSGITFANFLSRLHEA 314 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 TL+ + +G+IKAPFMA IGIVA EG VG + SLG+ VT VV++I +VI++D LF Sbjct: 315 VTLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTAAVVKAIFVVILMDGLF 374 Query: 365 AIFYFAI 371 A+FY AI Sbjct: 375 AMFYAAI 381 >gi|92116871|ref|YP_576600.1| hypothetical protein Nham_1315 [Nitrobacter hamburgensis X14] gi|91799765|gb|ABE62140.1| protein of unknown function DUF140 [Nitrobacter hamburgensis X14] Length = 377 Score = 305 bits (781), Expect = 8e-81, Method: Composition-based stats. Identities = 135/376 (35%), Positives = 206/376 (54%), Gaps = 11/376 (2%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +++ AG W + + V A + + +D+S I+ +DT GA LI Sbjct: 10 IAQGDGLALCAAGPWTARFAPALERIVADAEKLAGSRPNIFIDVSQISRLDTFGAWLIER 69 Query: 61 FMEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 + K+ G+S + SL+ R + P R + L +G+ Sbjct: 70 LRRSLTQGGVEAKIAGLSLNYS---SLVDEVRRVPAADPAPARQ---RALTGLIEDVGRN 123 Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 +V F +LG V++ +G F+ L S + + V VP+V+LI+F+ Sbjct: 124 VVGFGTTLTGLIGMLGAVLAASGRVMRHPRSFR--LTSTVHHLEQVCWRAVPIVVLITFL 181 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G +I+QQG F +FGA+IF +D++ +L LREIGVLL A+M+AGRSGSA AE+GSMK+ Sbjct: 182 IGCIISQQGIFHFRKFGADIFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMKM 241 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EEIDA+RTMG D + +L+ PR+ AL+I+LP+L L +A+ G +V W Y + F Sbjct: 242 REEIDALRTMGFDPIEVLVLPRMLALVIALPILAFLGAIAALYGGGLVAWLYGGVQPEAF 301 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 R ++ + G+IKAP MA IGIVA EG AV + SLG++ T+ VV+ I V Sbjct: 302 LIRLRDAISIDHFVVGMIKAPVMAAVIGIVACVEGLAVEGSAESLGQRTTSSVVKGIFFV 361 Query: 358 IIIDSLFAIFYFAIGI 373 I++D +FAIF+ +IG+ Sbjct: 362 IVMDGVFAIFFASIGM 377 >gi|110633893|ref|YP_674101.1| hypothetical protein Meso_1540 [Mesorhizobium sp. BNC1] gi|110284877|gb|ABG62936.1| protein of unknown function DUF140 [Chelativorans sp. BNC1] Length = 395 Score = 305 bits (781), Expect = 8e-81, Method: Composition-based stats. Identities = 159/370 (42%), Positives = 217/370 (58%), Gaps = 3/370 (0%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ENG V R +GNW + +S + DD + + I+DL + +DT GA L+ Sbjct: 27 EENGALVCRLSGNWTTRTVS-LVDDPMRRLRARKGLTHFIIDLGDVGHLDTAGAWLVSRL 85 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 +S E L++ + P+ N N+ +G+ I Sbjct: 86 AAAQKENGAQVEISGQSEAASILLAAIEPTAQEPDVPKDGRRGNLIVNILAAMGRTIYDI 145 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 +D HILG IS + ++ Q+ +GV +P+++L+S V GA+ Sbjct: 146 KDDVLYGMHILGATISGAQMKLGRGHAVNP--AAIANQIDRMGVGSIPIIVLMSAVVGAI 203 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IAQQGAFQL FGAEI+ +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE+ Sbjct: 204 IAQQGAFQLRWFGAEIYVVDLVGILILRELGVLLTAIMIAGRSGSAITAEIGSMKMREEV 263 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ +GL+ V +L+ PR+ AL++++P LTI+ANFSA+ GA +V W Y DI A F R Sbjct: 264 DALTVIGLNPVGVLVFPRLVALVVAVPCLTIVANFSALGGAILVAWLYSDIMPATFIQRL 323 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 H L +IF GLIKAPFMA IGI+A EG VG + SLGK VT VV++I +VI+ID Sbjct: 324 HDAIDLTSIFAGLIKAPFMALIIGIIASVEGMKVGGSAESLGKHVTASVVKTIFLVIVID 383 Query: 362 SLFAIFYFAI 371 LFA+FY AI Sbjct: 384 GLFAMFYAAI 393 >gi|209884491|ref|YP_002288348.1| ABC transporter permease protein [Oligotropha carboxidovorans OM5] gi|209872687|gb|ACI92483.1| ABC transporter permease protein [Oligotropha carboxidovorans OM5] Length = 378 Score = 305 bits (781), Expect = 9e-81, Method: Composition-based stats. Identities = 132/369 (35%), Positives = 201/369 (54%), Gaps = 12/369 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINK-SIQSDSAIVDLSAITEIDTIGAELIMYFME---K 64 R AG W + V ++ + ++D+S ++ +DT GA LI + Sbjct: 18 LRAAGEWTVHHAPALEKLVEHTERAGKSRNAALVIDVSQVSRLDTFGAWLIERLRRAQIR 77 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + G+S SL+ R K +P+ +F +G+ +V+ Sbjct: 78 GDVAPPIAGLSADYA---SLVEEVKRVKAPPVQPRPAFGP---IRAVEAVGRSVVEVGQT 131 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 S +++G V+ F+ S I + V VP+V+LI+F+ G +IAQ Sbjct: 132 LLSLLNMMGSVLHALWRVILHPSHFR--FTSTIHHLEQVCWRAVPIVLLITFLIGCIIAQ 189 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG FQ +FGA++F +D++ +L LREIGVLL A+M+AGRSGSA AE+GSM++ EE+DA+ Sbjct: 190 QGIFQFRKFGADVFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMRMREEVDAL 249 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 RTMG D +LI PRI ALII++P+L L +A+ G + W Y + F +R Sbjct: 250 RTMGFDPTEVLILPRILALIIAMPILAFLGAMAALYGGGLTAWLYGGVQPDAFLARLREA 309 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++ + GL+KAPFMA IGI+A EG AV + SLG+ T VV+SI VI++D +F Sbjct: 310 ISINHFTVGLVKAPFMALIIGIIACVEGAAVRGSAESLGQHTTASVVKSIFFVIVVDGIF 369 Query: 365 AIFYFAIGI 373 AIF+ +IG+ Sbjct: 370 AIFFASIGV 378 >gi|90425518|ref|YP_533888.1| hypothetical protein RPC_4043 [Rhodopseudomonas palustris BisB18] gi|90107532|gb|ABD89569.1| protein of unknown function DUF140 [Rhodopseudomonas palustris BisB18] Length = 378 Score = 304 bits (780), Expect = 1e-80, Method: Composition-based stats. Identities = 132/376 (35%), Positives = 206/376 (54%), Gaps = 10/376 (2%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +S + R G+W + + + + + Q+ + +DL+ + EIDT+GA L+ Sbjct: 10 ISTGDGLLLRPTGSWTAVHAAALEHLFDVVAPQLRQAKALTIDLAELHEIDTLGAWLLEK 69 Query: 61 FMEKYHG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 + + G + L + +R+ +P + + IG+ Sbjct: 70 ISRRAAQAGHPASVVGAAERYAGLIDQVRQVNRR-----QPANAVRGSLILTRLEDIGRA 124 Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 D + + G + + + L SL+ Q+Y VG +P++ LI+F+ Sbjct: 125 TWGAREDLFAFLQMTGALANALLGVLRRPRSLR--LTSLVYQIYRVGWQAIPIIGLITFL 182 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 GA+IAQQG F +FGAE + +D++ IL LRE+GVL+ A+M+AGRSGSA AE+GSMK+ Sbjct: 183 IGAIIAQQGIFHFRKFGAESYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAELGSMKM 242 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EEIDA+ TM LD V +LI PR+ ALII+LP+L L +A+ G +V W Y + +F Sbjct: 243 REEIDALSTMDLDPVEVLILPRVIALIIALPILAFLGAMAALYGGGLVAWFYGGMSPTIF 302 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 +R H ++ + G+IKAPFMA IGIVA EG V + SLG++ T VV+SI V Sbjct: 303 IARLHEAVSITHFEVGIIKAPFMALVIGIVACSEGLRVMGSAESLGRQTTASVVKSIFCV 362 Query: 358 IIIDSLFAIFYFAIGI 373 I++D LFA+F+ +IG+ Sbjct: 363 IVLDGLFAVFFASIGM 378 >gi|148257023|ref|YP_001241608.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146409196|gb|ABQ37702.1| putative ABC transporter (permease protein) [Bradyrhizobium sp. BTAi1] Length = 378 Score = 304 bits (780), Expect = 1e-80, Method: Composition-based stats. Identities = 136/368 (36%), Positives = 211/368 (57%), Gaps = 10/368 (2%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R +G+W S ++E+ + A K + + +DL A++EIDT+G L+ Sbjct: 18 LRPSGSWVSLNVTELENLTRSASGKVGNAKAVKLDLGAVSEIDTVGVWLLEKLSRSAAAG 77 Query: 69 ---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 +++ GV+ + L + +R+ I N +G+ + D Sbjct: 78 GRLVEMTGVAENYVGLVEEVRQVNRRDIAPPP-----RQNPIVAKLTDLGRSTLGAARDV 132 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 +L + A + + SL+ QMY +G +P+V+LI+F+ GA+IAQQ Sbjct: 133 TVFLDMLAALSLALVRTLARPRSLR--VTSLVYQMYRIGWQAIPIVVLITFLIGAIIAQQ 190 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 G F +FGAE + +D++ IL LRE+GVL+ A+M+AGRSGSA AE+GSMK+ EEIDA+ Sbjct: 191 GIFHFRRFGAESYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAELGSMKMREEIDALV 250 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 TMGLD V +LI PRI ALI++LP+L + + +A+ G +V Y + A+F +R H Sbjct: 251 TMGLDPVEVLILPRIVALILTLPILAFIGSMAALYGGGLVAQLYGGMGPAIFIARLHDAV 310 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 ++ + G+ KAPFMA IGIVA EG V + SLG++ TT VV+SI +VI++D LFA Sbjct: 311 SVTHFEVGMWKAPFMALVIGIVACSEGLRVKGSAESLGQQTTTSVVKSIFLVIVLDGLFA 370 Query: 366 IFYFAIGI 373 +F+ +IG+ Sbjct: 371 VFFASIGL 378 >gi|229587675|ref|YP_002869794.1| putative ABC transporter permease [Pseudomonas fluorescens SBW25] gi|229359541|emb|CAY46382.1| putative ABC transport system, permease [Pseudomonas fluorescens SBW25] Length = 382 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 120/365 (32%), Positives = 197/365 (53%), Gaps = 5/365 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G+W + + + ++ + A +DL+ + +DT GA L++ + + Sbjct: 21 LRITGDWTLAHYASL-KKLSDKLDGQYDAG-ARIDLNGLGALDTAGASLLVELLGPTRIE 78 Query: 69 IKLQGVSTHI-EQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + + +L+ +R P+++ + + IG+ + DS Sbjct: 79 QSAEQTDCSLSAADRALLKTVYRSLNDFCVPEKAPEEAAGIQVLARIGRAVDTVWQDSKQ 138 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +GL++ +++ L ++ + VG+ P+V L++F+ GAV+A GA Sbjct: 139 LLGFIGLILETFARGIFRPRRWR--LTPMVAHLEQVGLDAAPIVALLTFLVGAVVAFLGA 196 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L FGA IF++DL++ LRE GVLLTA++IAGR+ SA A+IGSMK NEEIDAIRT+ Sbjct: 197 TVLKSFGATIFTVDLVAFSFLREFGVLLTAILIAGRTASAFTAQIGSMKANEEIDAIRTL 256 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GLD + +L+ PR+ AL+++LP+LT LA S I+G +V DI A+F S S + Sbjct: 257 GLDPMELLVLPRVLALLVALPMLTFLAMLSGIVGGGVVCAVALDISPAMFLSLLQSDIGV 316 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + GL+KAP A I + EGF V + S+G T+ VVQSI +VI++D++ A+F Sbjct: 317 QHFLVGLVKAPIFAFLIAAIGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVLDAVAALF 376 Query: 368 YFAIG 372 + +G Sbjct: 377 FMEMG 381 >gi|299131823|ref|ZP_07025018.1| protein of unknown function DUF140 [Afipia sp. 1NLS2] gi|298591960|gb|EFI52160.1| protein of unknown function DUF140 [Afipia sp. 1NLS2] Length = 383 Score = 304 bits (779), Expect = 2e-80, Method: Composition-based stats. Identities = 131/369 (35%), Positives = 193/369 (52%), Gaps = 12/369 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAIN-KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R G W + V + S ++D+S I+ +DT GA LI Sbjct: 23 LRAGGEWTVHHAPALEKLVERTERSRDGSRASLVIDVSQISRLDTFGAWLIERLRRALTR 82 Query: 68 KIK---LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + G+S L + + P +G+ +V + Sbjct: 83 GDTAPMIAGLSADYASLVEEVKRVKAVPEPAKVPFGPV------RAVEAVGRTVVGVADT 136 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 ++ G ++S F+ L S + Q+ V VP+V+LI+F+ G +IAQ Sbjct: 137 LLGLLNMTGSILSAFWRVILHPSHFR--LTSTVHQLEQVCWRAVPIVVLITFLIGCIIAQ 194 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG FQ +FGA++F +D++ +L LREIGVLL A+M+AGRSGSA AE+GSM++ EE+DA+ Sbjct: 195 QGIFQFRKFGADVFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMRMREEVDAL 254 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 RTMG D +LI PRI AL+I++P+L L +A+ G + W Y + F SR Sbjct: 255 RTMGFDPTEVLILPRILALVIAMPILAFLGAMAALYGGGLTAWLYGGVQPDAFLSRLREA 314 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++ + GL+KAPFMA IGI+A EG AV + SLGK T VV+SI VI++D LF Sbjct: 315 ISINHFTVGLVKAPFMALIIGIIACVEGAAVQGSAESLGKHTTASVVKSIFFVIVVDGLF 374 Query: 365 AIFYFAIGI 373 AIF+ +IG+ Sbjct: 375 AIFFASIGV 383 >gi|307297001|ref|ZP_07576817.1| protein of unknown function DUF140 [Sphingobium chlorophenolicum L-1] gi|306877527|gb|EFN08755.1| protein of unknown function DUF140 [Sphingobium chlorophenolicum L-1] Length = 376 Score = 304 bits (778), Expect = 2e-80, Method: Composition-based stats. Identities = 114/370 (30%), Positives = 197/370 (53%), Gaps = 14/370 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 G TV R +GN + ++ + + +I+ +DLS + +DTIGA ++ + Sbjct: 19 REGRTVIRLSGNLSIACLHDLPNRL-----DAIEGPVDTIDLSGVDHMDTIGAWVLHRTI 73 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ K+ G E+L + + R ++ + IG+ +V Sbjct: 74 KRL--DCKITGDKCDAERLITTVGSVDE-----PVNIRPDHEPPWQRVVGQIGEAVVNSG 126 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 G + T +F+ + +++++ VGVS + ++ L+SF+ G VI Sbjct: 127 TTLLGLLGFFGGTLVATWNVIRHPGRFR--INAVVQRFEVVGVSALGIIGLMSFLIGIVI 184 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQG+ QL QFG E+ +I+L+ L RE+GVL+TA+M+AGRSGSA A++G+MK+ EE+D Sbjct: 185 AQQGSVQLRQFGMEMLTINLVGRLTFRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEVD 244 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+RT+G+ + L+ PR A+++ +PLL+ A+ AIIG + DIP F R Sbjct: 245 AMRTIGVSPMEALVLPRTLAVVVMMPLLSFYASIVAIIGGGFLCAVSLDIPPITFVQRLR 304 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + +++ GLIKAP I + +G V ++ +G + T VVQ+I +VI++D+ Sbjct: 305 EVVPIHDLWVGLIKAPVFGVIIALAGCFQGMQVKANAEEVGLRTTAAVVQAIFLVIVLDA 364 Query: 363 LFAIFYFAIG 372 FA+F+ +G Sbjct: 365 FFAVFFTWVG 374 >gi|154248034|ref|YP_001418992.1| hypothetical protein Xaut_4113 [Xanthobacter autotrophicus Py2] gi|154162119|gb|ABS69335.1| protein of unknown function DUF140 [Xanthobacter autotrophicus Py2] Length = 474 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 134/372 (36%), Positives = 200/372 (53%), Gaps = 7/372 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S++ G W S E+ V +DLSA+ +DT GA L Sbjct: 110 SQDDRLTVAGRGAWTSEYADELEQAVDDTARSYANPKGIEIDLSAVERMDTFGALLFERL 169 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + G V + LI R + P R + + G + V Sbjct: 170 KRSWKGTGVEPQVKGLAPRYKVLIEEMGRMGQEQPPPARRH-----EAILERFGHETVNV 224 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 D+ + + +G ++ G F+ +++ QM VG+ VP+++LI+F+ G + Sbjct: 225 AADAAALLNFVGASVAAMGRVLLRPRSFR--FTAMVNQMDRVGLRAVPIIVLITFLIGCI 282 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +AQQG F +FGA+I+ +D++ +L LRE+GVL+ A+MIAGRSGSA AE+GSM++ EEI Sbjct: 283 LAQQGIFNFRRFGADIYVVDMVGVLVLRELGVLIVAIMIAGRSGSAYTAELGSMRMREEI 342 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+R MG D V +L+ PR+ ALII+LPLLT + + S+++GA +V W Y I VF R Sbjct: 343 DALRVMGFDPVEVLVVPRLLALIIALPLLTFIGSMSSLLGAGLVSWGYGGITPDVFLDRL 402 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + G+IKAPFMA IGIVA EG VG + SLG T VV++I +VI++D Sbjct: 403 KGAIDMDQFNVGMIKAPFMAATIGIVACLEGLRVGGSAESLGAHTTASVVKAIFLVIVMD 462 Query: 362 SLFAIFYFAIGI 373 +FA+F+ AI + Sbjct: 463 GVFAMFFAAIDM 474 >gi|58580429|ref|YP_199445.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae KACC10331] gi|58425023|gb|AAW74060.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae KACC10331] Length = 398 Score = 303 bits (777), Expect = 3e-80, Method: Composition-based stats. Identities = 120/364 (32%), Positives = 193/364 (53%), Gaps = 13/364 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R AG+W A+ + +++ +D I ++D+ G ++ F + K Sbjct: 47 LRLAGSWVLATALPQAE-----LLQTVPDGVRRIDARGIQQLDSAGVLQLLRFASRIGLK 101 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + +L+ + KP+R + F +G+ + D Sbjct: 102 EDAIDFRDEHQ---ALVCTIEELNDERPKPKRDY---GFVAALDRLGRATHRIGQDILEL 155 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + +F+ L S + M VG+ VP+V+L+S++ GAVIA G+ Sbjct: 156 NSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFLGST 213 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAIRT+G Sbjct: 214 ILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIRTLG 273 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD + +L+ PR+ ALI +LPLLT +A + + G V DIP ++ +R H T L Sbjct: 274 LDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHETIQLR 333 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ A+++ Sbjct: 334 HFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWF 393 Query: 369 FAIG 372 +G Sbjct: 394 MKMG 397 >gi|254512708|ref|ZP_05124774.1| ABC transporter, inner membrane subunit [Rhodobacteraceae bacterium KLH11] gi|221532707|gb|EEE35702.1| ABC transporter, inner membrane subunit [Rhodobacteraceae bacterium KLH11] Length = 374 Score = 303 bits (777), Expect = 3e-80, Method: Composition-based stats. Identities = 128/371 (34%), Positives = 206/371 (55%), Gaps = 13/371 (3%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 R G+ ++ E+ ++ D + ++D+S + +DT GA LI + + Sbjct: 14 GVHIRITGDLRTQELDDVEADFGKL---RPSGQNVVLDMSQLQSLDTGGAWLIADLVRRL 70 Query: 66 HG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 +++ +G L +S + + +Q P R IG++ Sbjct: 71 GSDSSQVQFEGAKPAHASLIETVSKNIPQAVGDQAPAR-----GVVVWVSRIGERTFGAW 125 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 D+ S LGL + ++ + +L+ QM VG +P+V L+ F+ G V+ Sbjct: 126 EDTLSIMGFLGLTLHRLVRTLIMPWRLRR--AALVSQMEQVGFKALPIVALMGFLIGVVL 183 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL QFGAEIF ++L+SI LRE+G+LLTA+++AGRSGSA A IGSMK+ EEID Sbjct: 184 AFQGATQLKQFGAEIFVVELISISILRELGILLTAIIVAGRSGSAFTASIGSMKVQEEID 243 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+RT+GLD + +L+ PR+ AL+I LP+L +A+ + +IG +++ W + +F +R Sbjct: 244 AMRTLGLDPIEVLVIPRVLALLIMLPILGFIADMAGLIGGALMSWIDLGVSPGMFLTRLK 303 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 +A + G+IKAPF A IG++A + V S S+G++ T VVQSI +VI ID+ Sbjct: 304 ENTGVAQLAVGMIKAPFFALVIGVIACWQAMQVKGSSESVGQRTTASVVQSIFMVIAIDA 363 Query: 363 LFAIFYFAIGI 373 LF+IF+ +G+ Sbjct: 364 LFSIFFSELGV 374 >gi|149374946|ref|ZP_01892719.1| putative permease of ABC transporter [Marinobacter algicola DG893] gi|149360835|gb|EDM49286.1| putative permease of ABC transporter [Marinobacter algicola DG893] Length = 374 Score = 303 bits (777), Expect = 3e-80, Method: Composition-based stats. Identities = 117/364 (32%), Positives = 198/364 (54%), Gaps = 4/364 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 +G+W P + DV A+ K + D V+L+ I +DT GA L++ + + Sbjct: 14 LTVSGDWTLPNYGSLKRDVQNAVLKEV-PDGHSVNLATINALDTAGASLLVDLLGAHELH 72 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + + L+ + + + +++F N IG+ I F + Sbjct: 73 ELTEQTPELSSERQELLRLV-ANAMASPEGEKAFCSNPITEFLAGIGENIEDFWHQQRLL 131 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 G +++ A+ ++++ + SL+ ++ G++ +P+V L++F+ GAV+A GA Sbjct: 132 IGFTGQILATLASILATPWRWR--ITSLVAHVHQTGLNALPIVALLTFLVGAVVAFLGAT 189 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L FGA I++++L++ LRE GVLL A+++AGR+ SA A++GSMK NEEIDA+RT G Sbjct: 190 ILDDFGATIYTVNLVAFSFLREFGVLLAAILLAGRTASAFTAQLGSMKANEEIDALRTFG 249 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 L V +L+ PR+ A++ISLP+LT + S IIG S+V DI + + + Sbjct: 250 LSPVELLVIPRVLAMVISLPILTFVGMISGIIGGSVVCVLALDISVPQILNILETKVKVV 309 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 ++ GL KAP A I ++ EGF + S+G+ T+ VVQSI +VI++DS+ AIF+ Sbjct: 310 HLLVGLGKAPVFAFVIAVIGCLEGFKASGSAQSVGEHTTSAVVQSIFMVILLDSIAAIFF 369 Query: 369 FAIG 372 +G Sbjct: 370 MEMG 373 >gi|87200858|ref|YP_498115.1| hypothetical protein Saro_2845 [Novosphingobium aromaticivorans DSM 12444] gi|87136539|gb|ABD27281.1| protein of unknown function DUF140 [Novosphingobium aromaticivorans DSM 12444] Length = 372 Score = 303 bits (776), Expect = 3e-80, Method: Composition-based stats. Identities = 117/371 (31%), Positives = 194/371 (52%), Gaps = 13/371 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + F+G + + + I A +DLSA+T +DT+GA + Sbjct: 13 GQGAGATLAFSGPMTVSSLGLTDQRL-----RHITDPVARIDLSAVTAMDTVGAWTVWRL 67 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 ++ S ++L IS + P+ F+ + +G ++ Sbjct: 68 SRDTGA--EIVACSEEAQKLVDAISKADSNAHSIEPPR----LPLFQRVPEKVGDAMIGL 121 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + LG VI G +F+ + +L+ QM VGV+ + ++ L+SF+ G V Sbjct: 122 GLGAVQVLGFLGQVILAIGTLVRHPSRFR--MKALVHQMELVGVNALAIIGLMSFLVGIV 179 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IAQQGA QL QFGAEI++++L+ L LRE+GVL+TA+M+AGRSGSA A++G+MK+ EE+ Sbjct: 180 IAQQGAVQLRQFGAEIYTVNLVGRLTLRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEV 239 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+RT+G+ + L+ PRI A ++ +PLL + F IIG + + IPF F +R Sbjct: 240 DAMRTIGVSPMEALVVPRILATMVMMPLLGFYSAFIGIIGGAFLSSLTLGIPFFTFLARI 299 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 L +++ G+ KAP + + +G V ++ +G + T VV +I +VI++D Sbjct: 300 QEVVPLHDVWVGITKAPVFGLIVAVAGCYQGMQVKTNAEEVGTRTTAAVVMAIFMVIVLD 359 Query: 362 SLFAIFYFAIG 372 + FA+F+ IG Sbjct: 360 AFFAVFFTEIG 370 >gi|260430754|ref|ZP_05784726.1| ABC transporter, inner membrane subunit [Silicibacter lacuscaerulensis ITI-1157] gi|260418195|gb|EEX11453.1| ABC transporter, inner membrane subunit [Silicibacter lacuscaerulensis ITI-1157] Length = 374 Score = 302 bits (775), Expect = 4e-80, Method: Composition-based stats. Identities = 123/373 (32%), Positives = 199/373 (53%), Gaps = 13/373 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 N +G + + + + + DLS + +DT GA LI Sbjct: 12 NDALRIAVSGEMVTQSLESVEKGFRAL---HPDAKRIVFDLSGLGSLDTGGAWLICDLAR 68 Query: 64 KY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 + + + V+ L ++ +I + P R F +G++ V Sbjct: 69 RASAAGATVTYENVTATQSALLETVAQNIAAEIPAEAPPRGFVP-----WLESLGRRTVG 123 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 D+ S LGL + ++ + +L+ QM G+ +P+V L+ F+ G Sbjct: 124 AGRDTASMLSFLGLTLHRLARTLVMPWRLRR--AALVSQMEETGLKALPIVALMGFLIGV 181 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A QGA QL QFGAEIF ++L+SI LRE+GVLLTA+++AGRSGSA A IGSMK+ EE Sbjct: 182 VLAFQGATQLKQFGAEIFVVELISISVLRELGVLLTAIIVAGRSGSAFTASIGSMKVQEE 241 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA++T+GLD + +L+ PR+ AL+I LP+L +A+ + + G +++ W + +F +R Sbjct: 242 IDAMQTLGLDPIEVLVVPRVLALLIMLPILGFVADMAGLFGGALMSWIDLGVSPGMFVTR 301 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + ++ GLIKAPF A I ++A + V S S+G++ T+ VVQ+I +VI I Sbjct: 302 LKENTDVWHLAVGLIKAPFFAVVIAVIACWQAMQVKGSSQSVGQRTTSSVVQAIFMVIAI 361 Query: 361 DSLFAIFYFAIGI 373 D+LF+IF+ +G+ Sbjct: 362 DALFSIFFSEVGV 374 >gi|27381176|ref|NP_772705.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27354343|dbj|BAC51330.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 378 Score = 302 bits (775), Expect = 4e-80, Method: Composition-based stats. Identities = 132/368 (35%), Positives = 207/368 (56%), Gaps = 10/368 (2%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY--- 65 R G+W + ++ + +S + +D+S ++ +DT+GA ++ + Sbjct: 18 LRPQGSWTAANVAMLETLSRSVGADVDRSRAVTLDMSGVSALDTLGAWVLEKLSRRAATS 77 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 + GV+ H L + +R + N +GK V D Sbjct: 78 GRSAEFVGVADHFSGLMDEVREVNRHTPAP-----AAAPNPLLLRLGDLGKSTVGAREDI 132 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 +LG + + L SL+ Q+Y +G +P+V LI+F+ GA+IAQQ Sbjct: 133 TIFLQMLGALFMAIFGVLRRPRSLR--LTSLVYQLYRIGWQAIPIVALITFLIGAIIAQQ 190 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 G F +FGAE +++D++ IL LRE+GVL+ A+M+AGRSGSA AE+GSMK+ EEIDA+ Sbjct: 191 GFFHFRRFGAESYTVDMVGILVLRELGVLIVAIMVAGRSGSAYTAELGSMKMREEIDALS 250 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 TMGLD V +LI PR+ AL+I+LP+L + + +A+ G +V Y D+ A++ +R H Sbjct: 251 TMGLDPVGVLILPRVAALVIALPILAFIGSIAALYGGGLVAQFYGDMGPAIYIARLHEAI 310 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 ++ + G++KAPFMA IGIVA EG V + SLG++ TT VV+SI +VI++D LFA Sbjct: 311 SVTHFEVGILKAPFMALVIGIVACSEGLRVKGSAESLGRQTTTSVVKSIFLVIVLDGLFA 370 Query: 366 IFYFAIGI 373 IF+ +IG+ Sbjct: 371 IFFASIGM 378 >gi|158423837|ref|YP_001525129.1| hypothetical protein AZC_2213 [Azorhizobium caulinodans ORS 571] gi|158330726|dbj|BAF88211.1| protein of unknown function [Azorhizobium caulinodans ORS 571] Length = 408 Score = 302 bits (775), Expect = 4e-80, Method: Composition-based stats. Identities = 134/365 (36%), Positives = 207/365 (56%), Gaps = 13/365 (3%) Query: 12 AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK--- 68 G W S + V+ + ++ + +DLS + +DT GA L+ + K Sbjct: 54 QGAWTSEYADSLEQAVMQVASHYGEAKAVEIDLSRLDRMDTFGALLLERLRRVWQEKGVE 113 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 ++ G++ L ++ T R+ + IG+++V D+ S Sbjct: 114 PQIVGLNPAYSVLIEEMTRTGREPP--------PPERKPPGVFERIGREMVVITEDAVSL 165 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 + +G V++ G F+ S++ QM VG +P++ILI+F+ G +IAQQG F Sbjct: 166 LNFVGAVVAAFGRVLTRPRSFR--FTSMVNQMDRVGFRAMPIIILITFLIGCIIAQQGIF 223 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 +FGA+I+ +D++ +L LRE+GVL+ ++MIAGRSGSA AE+GSM++ EE+DA+R MG Sbjct: 224 NFRRFGADIYVVDMVGVLVLRELGVLIVSIMIAGRSGSAYTAELGSMRMREEVDALRVMG 283 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 D V +L+ PR+ ALII LPLLT + + +A+IG +V W Y I VF +R TLA Sbjct: 284 FDPVEVLVVPRLLALIICLPLLTFVGSMAAMIGGGLVAWFYGGIAPDVFINRLKDAITLA 343 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 G+IKAPFMA IG+V EG VG + SLG+ T VV++I +VI++D LFAIF+ Sbjct: 344 QFEVGMIKAPFMAAIIGVVGCMEGLRVGGSAESLGQHTTASVVKAIFLVIVVDGLFAIFF 403 Query: 369 FAIGI 373 +I + Sbjct: 404 ASIDM 408 >gi|114798707|ref|YP_761599.1| hypothetical protein HNE_2921 [Hyphomonas neptunium ATCC 15444] gi|114738881|gb|ABI77006.1| putative membrane protein [Hyphomonas neptunium ATCC 15444] Length = 375 Score = 302 bits (775), Expect = 4e-80, Method: Composition-based stats. Identities = 110/372 (29%), Positives = 189/372 (50%), Gaps = 9/372 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + V R G+W I + + + QS +D+S + +DT GA LI Sbjct: 13 DSDEGNVLRLGGDWTVATI----NQLDAQLRAVSQSVPICLDVSGLGRLDTSGAYLIDRT 68 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + + V H SL+ H P ++ + GK V F Sbjct: 69 WRENGAAWPPRIVGDHASA-ASLLEQVHAHAEPVPPPAKAD--AGLLAMLERTGKGSVDF 125 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 ++ + LG + +K + S++ M G++ +P++ +SF G V Sbjct: 126 YKETTASLAFLGETLVTIVRLLVQPWKLR--WTSIVAVMEEAGLNAMPIIAFLSFFVGMV 183 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A GA L F EI++I+L+ LRE GV+LT +++AGR+ S+ A+IG+MK+ +E+ Sbjct: 184 VAFIGATTLKDFDLEIYTIELIGFSMLREFGVVLTGIVLAGRTNSSFTAQIGTMKMRQEV 243 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA++T+GL + +L++PR+ A+++ P+LT +A + + G + V W DI AVF R Sbjct: 244 DAMQTLGLKPMDVLVAPRVLAMLVMTPILTFVATLAGVAGGATVAWAALDINPAVFVERM 303 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 ++ + + G+ K+P + ++A ++G VG SLGK TT VVQ+I +I+ID Sbjct: 304 RNSVPIDQFWIGMSKSPVFGLVVALIACRQGLQVGGSVQSLGKATTTSVVQAIFAIIVID 363 Query: 362 SLFAIFYFAIGI 373 ++FAIFY +G+ Sbjct: 364 AIFAIFYMELGL 375 >gi|86748751|ref|YP_485247.1| hypothetical protein RPB_1627 [Rhodopseudomonas palustris HaA2] gi|86571779|gb|ABD06336.1| Protein of unknown function DUF140 [Rhodopseudomonas palustris HaA2] Length = 383 Score = 302 bits (774), Expect = 5e-80, Method: Composition-based stats. Identities = 130/376 (34%), Positives = 200/376 (53%), Gaps = 11/376 (2%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 ++ AG+W + + V A + + +D+S + +DT GA LI Sbjct: 16 IARGDGLALCAAGSWTAKFAPVLERIVADAEQLTGTRPNIFIDVSEVVRLDTFGAWLIER 75 Query: 61 FMEKYHG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 + K+ G+S + L + P + + +G+ Sbjct: 76 LRRNLAQDGIEAKIAGLSANYASLVDEVRQV------EPVPADTSRGGGLRAPIEKLGRT 129 Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + F +D + +LG V++ F+ L S + + V VP+V+LI+F+ Sbjct: 130 MFAFGDDIVALISMLGAVLAGVLRAILHPSTFR--LASTVHHLEQVCWRAVPIVVLITFL 187 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G +IAQQG F +FGA++F +D++ +L LREIGVLL A+M+AGRSGSA AE+GSMK+ Sbjct: 188 IGCIIAQQGIFHFRRFGADVFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMKM 247 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EEIDA+RTMG D + +LI PR+ AL++++P+LT L +A+ G +V W Y + F Sbjct: 248 REEIDALRTMGFDPIDVLIVPRLLALLLAMPILTFLGAMAALYGGGLVAWLYGGVDPEAF 307 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 R ++ + G+IKAP MA IGIVA EG AV + SLG+ T VV+ I V Sbjct: 308 LLRLRDAISINHFTVGMIKAPVMALVIGIVACVEGLAVRGSAESLGQHTTASVVKGIFFV 367 Query: 358 IIIDSLFAIFYFAIGI 373 I++D +FAIF+ +IGI Sbjct: 368 IVMDGVFAIFFASIGI 383 >gi|115523490|ref|YP_780401.1| hypothetical protein RPE_1471 [Rhodopseudomonas palustris BisA53] gi|115517437|gb|ABJ05421.1| protein of unknown function DUF140 [Rhodopseudomonas palustris BisA53] Length = 377 Score = 302 bits (774), Expect = 5e-80, Method: Composition-based stats. Identities = 127/376 (33%), Positives = 199/376 (52%), Gaps = 11/376 (2%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +++ AG W +P + VV A S ++D+S ++ +DT GA LI Sbjct: 10 IAKGNALALCAAGPWTAPYAPALERIVVEAEALSSDGAKVLIDVSDVSRLDTFGAWLIER 69 Query: 61 FMEKYHG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 + ++ G+S + L + R + IG+ Sbjct: 70 LRRSLAQGGIEAQIAGLSANYSSLVDEVRRVEADDAPRSTKMR------LRAPLEEIGRN 123 Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 +V F + S + G V ++ F+ L S + + V VP+V+LI+F+ Sbjct: 124 VVGFGDTMVSLVAMSGAVTASVFRLIRHPLSFR--LTSTVHHLEQVCWRAVPIVVLITFL 181 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G ++AQQG F +FGA++F +D++ +L LRE+GVLL A+M+AGRSGSA AE+GSMK+ Sbjct: 182 IGCIVAQQGIFHFRKFGADVFVVDMLGVLVLRELGVLLVAIMVAGRSGSAYTAELGSMKM 241 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EEIDA+RTMG D + +L+ PR+ AL++++P+LT L +A+ G +V W Y + F Sbjct: 242 REEIDALRTMGFDPIDVLVMPRLIALVLAVPILTFLGVVAALYGGGLVAWVYGGVEPDAF 301 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 R ++ + G+IKAP MA IG+VA EG AV + SLG+ T VV+ I V Sbjct: 302 LLRLREAISIDHFTVGMIKAPVMALVIGVVACVEGLAVQGSAESLGQHTTASVVKGIFFV 361 Query: 358 IIIDSLFAIFYFAIGI 373 I++D +FAI + IG+ Sbjct: 362 IVMDGVFAIMFATIGM 377 >gi|78049251|ref|YP_365426.1| ABC transporter permease [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78037681|emb|CAJ25426.1| ABC transporter permease [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 409 Score = 302 bits (773), Expect = 8e-80, Method: Composition-based stats. Identities = 119/364 (32%), Positives = 192/364 (52%), Gaps = 13/364 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G+W A+ + +++ +D I ++D+ G ++ F + K Sbjct: 58 VRLVGSWVLATALPQAE-----LLQAVPDGVRRIDARGIQQLDSAGVLQLLRFAGRMGLK 112 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + +L+ + KP+R + F +G+ + D Sbjct: 113 EDAIDFRDEHQ---ALVCTIEELNDERPKPKRDY---GFVAALDRLGRATHRVGQDILEL 166 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + +F+ L S + M VG+ VP+V+L+S++ GAVIA G+ Sbjct: 167 NSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFLGST 224 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAIRT+G Sbjct: 225 ILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIRTLG 284 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD + +L+ PR+ ALI +LPLLT +A + + G V DIP ++ +R H T L Sbjct: 285 LDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHETIQLR 344 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ A+++ Sbjct: 345 HFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWF 404 Query: 369 FAIG 372 +G Sbjct: 405 MKMG 408 >gi|146341950|ref|YP_001206998.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146194756|emb|CAL78781.1| putative ABC transporter (permease protein) [Bradyrhizobium sp. ORS278] Length = 377 Score = 302 bits (773), Expect = 8e-80, Method: Composition-based stats. Identities = 135/375 (36%), Positives = 206/375 (54%), Gaps = 11/375 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 E R G W +P + V A + +S + +D+S ++++DT GA LI Sbjct: 11 GEGNALALRATGAWTAPFAPALERLVADAEKLAGKSGNVSIDVSQVSKLDTFGAWLIERL 70 Query: 62 MEKYHG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + + ++ G+S + L + + P + + IG+ + Sbjct: 71 RRSFTTGTVEARIDGLSANYASLVDEVRRV------SLAPGDDATNVTITGMLGQIGRSV 124 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + + +LG VI +G F+ L S I + V VP+++LI+F+ Sbjct: 125 AGIVGTVAALIDMLGAVIVASGRVLVHPRSFR--LTSTIHHLEQVCWRAVPIIVLITFLI 182 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G +IAQQG F +FGA+IF +D++ +L LREIGVLL A+MIAGRSGSA AE+GSMK+ Sbjct: 183 GCIIAQQGIFHFRRFGADIFVVDMLGVLVLREIGVLLVAIMIAGRSGSAYTAELGSMKMR 242 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+RTMG D + +LI PR+ AL+I+LP+L+ L + +A+ G +V W Y + F Sbjct: 243 EEIDALRTMGFDPIEVLILPRMLALVIALPILSFLGDIAALYGGGLVAWFYGGVDPEAFL 302 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 R ++ + GL+KAP MA IGIVA EG AV + SLG+ T+ VV+ I VI Sbjct: 303 LRLRDAISIDHFTVGLLKAPVMAAVIGIVACVEGLAVEGSAESLGRHTTSSVVKGIFFVI 362 Query: 359 IIDSLFAIFYFAIGI 373 ++D +FAIF+ A+G+ Sbjct: 363 VMDGVFAIFFAAVGM 377 >gi|319783795|ref|YP_004143271.1| hypothetical protein Mesci_4108 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169683|gb|ADV13221.1| protein of unknown function DUF140 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 395 Score = 302 bits (773), Expect = 8e-80, Method: Composition-based stats. Identities = 152/373 (40%), Positives = 226/373 (60%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 E+G+ F+G W + ++ + D + I K + +D+S I ++DT GA LI Sbjct: 27 EEDGVLGCAFSGIWTTRTVA-LVDADMRKIEKRSGFKTLALDVSKIEKMDTAGAWLIDRL 85 Query: 62 M---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + EK +I++QG S L + R++ ++ + N +G+++ Sbjct: 86 VSAFEKKGVEIQMQGQSEIASILLEAVGEAVRREPESGPVRPP---NIVIRALEAVGRRV 142 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + +D + +ILG I + ++ Q+ +GV +PVV+L+S + Sbjct: 143 YEMRDDFLASMNILGATIRGAQMKLGRGHAVNP--AAIFNQIDRMGVGAIPVVVLMSAIV 200 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA++AQQGA+QLS FGA+IF +DL+ +L LRE+GVL+TA+MIAGRSGSAI AEIGSMK+ Sbjct: 201 GAIVAQQGAYQLSYFGADIFVVDLVGVLILRELGVLMTAIMIAGRSGSAITAEIGSMKMR 260 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE+DA++ +GL+ + +L+ PR+ AL+I+LP LTI+ANF+A+ G + W Y DIP A F Sbjct: 261 EEVDALKVIGLNPIGVLVFPRLVALVIALPCLTIIANFAALGGGILAAWLYSDIPPAAFI 320 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 R L+ IF GLIKAPFMA IG +A EG VG + SLG+ VT VV+SI +VI Sbjct: 321 DRLRVAIDLSTIFAGLIKAPFMAMIIGTIASVEGMKVGGSAESLGQHVTASVVKSIFVVI 380 Query: 359 IIDSLFAIFYFAI 371 I+D LFA+FY AI Sbjct: 381 ILDGLFAMFYAAI 393 >gi|148256837|ref|YP_001241422.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146409010|gb|ABQ37516.1| putative ABC transporter (permease protein) [Bradyrhizobium sp. BTAi1] Length = 377 Score = 301 bits (772), Expect = 8e-80, Method: Composition-based stats. Identities = 133/375 (35%), Positives = 201/375 (53%), Gaps = 11/375 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 E R G W +P + V A + + +D+S ++ +DT GA LI Sbjct: 11 GEGSALSLRATGAWTAPFAPSLERLVADAEKLAGKKIDVSIDVSEVSRLDTFGAWLIERL 70 Query: 62 MEKYH---GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + + ++ G+S + L + + P + + IG+ + Sbjct: 71 RRSFTTGTAEARIDGLSANYASLVDEVRRV------SAAPDGDATAVTITGMLGQIGRSV 124 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + +LG VI +G F+ L S I + V VP+++LI+F+ Sbjct: 125 AGIFGTVAALIDMLGAVIVASGRVFIHPRSFR--LTSTIHHLEQVCWRAVPIIVLITFLI 182 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G +IAQQG F +FGA+IF +D++ +L LREIGVLL A+MIAGRSGSA AE+GSMK+ Sbjct: 183 GCIIAQQGIFHFRRFGADIFVVDMLGVLVLREIGVLLVAIMIAGRSGSAYTAELGSMKMR 242 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+RTMG D + +LI PR+ AL+I+LP+L+ L + +A+ G +V W Y + F Sbjct: 243 EEIDALRTMGFDPIEVLILPRMLALVIALPILSFLGDIAALYGGGLVAWFYGGVDPEAFL 302 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 R ++ + GL+KAP MA IGIVA EG AV + SLG+ T+ VV+ I VI Sbjct: 303 LRLREAISIDHFTVGLLKAPVMAAVIGIVACVEGLAVQGSAESLGRHTTSSVVKGIFFVI 362 Query: 359 IIDSLFAIFYFAIGI 373 ++D +FAIF+ +G+ Sbjct: 363 VMDGVFAIFFATVGM 377 >gi|149187032|ref|ZP_01865339.1| ABC-type transport system permease component [Erythrobacter sp. SD-21] gi|148829321|gb|EDL47765.1| ABC-type transport system permease component [Erythrobacter sp. SD-21] Length = 369 Score = 301 bits (772), Expect = 9e-80, Method: Composition-based stats. Identities = 118/369 (31%), Positives = 206/369 (55%), Gaps = 14/369 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G +V +G + + + +D+ + + A +DLS ++EIDT+GA L Sbjct: 13 EGGSVLALSGPYLVSTVGAVDEDL-----RGLDEPLARIDLSEVSEIDTVGAWLACQLAS 67 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 ++ ++ G S +L ++ + +++ + + + +G+K+ + Sbjct: 68 RHGA--EITGASERATRLLGALTG-----MDSEQALSAPRLPVWSRVPEAMGEKMFNARS 120 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 + LG + + G + +F+ ++L+ Q+ VGVS +P++ L+SF+ G VIA Sbjct: 121 GAIGVISFLGAALISAGNLIRNPRRFRT--VALVHQVELVGVSALPIIGLMSFLIGIVIA 178 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 QQGA QL+ FGAE +++L+ + LRE+GVL+TA+M+AGRSGSA A++G+MK+ EE+DA Sbjct: 179 QQGAVQLAAFGAETLTVNLVGRITLRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEVDA 238 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +RT+G+ + L+ PRI + ++ +PLL A+ AIIG ++V IPF F SR Sbjct: 239 MRTIGISPMEALVIPRILSAVLMMPLLGFYASCMAIIGGAVVGDLMLGIPFWTFLSRIQE 298 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +++ GLIKAP +G+ G V +S +GK+ T VV +I VI++D+ Sbjct: 299 VVPTYDVWVGLIKAPVFGLIVGLAGCYNGMQVEGNSEEVGKRTTLSVVAAIFAVIVLDAF 358 Query: 364 FAIFYFAIG 372 FA+F+ +G Sbjct: 359 FAVFFTELG 367 >gi|13470959|ref|NP_102528.1| permease of ABC transporter [Mesorhizobium loti MAFF303099] gi|14021702|dbj|BAB48314.1| permease of ABC transporter [Mesorhizobium loti MAFF303099] Length = 395 Score = 301 bits (772), Expect = 1e-79, Method: Composition-based stats. Identities = 154/373 (41%), Positives = 224/373 (60%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 E G+ F+G W + ++ + D + I K + +DLS I +IDT GA LI Sbjct: 27 EEAGVLGCAFSGIWTTRTVA-LIDADMRKIEKRSGFKTLALDLSKIEKIDTAGAWLIDRL 85 Query: 62 M---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + EK + +++LQG S L + R+ + + N +G+++ Sbjct: 86 VSAFEKKNVEVRLQGQSEIASILLDAVGEAVRR---EPESGPARPPNIIIRALEAVGRRV 142 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + +D + +ILG I + ++ Q+ +GV +PVV+L+S + Sbjct: 143 YEMRDDFLASMNILGATIRGAQMKLGRGHAVNP--AAIFNQIDRMGVGAIPVVVLMSAIV 200 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA++AQQGA+QLS FGA+IF +DL+ +L LRE+GVL+TA+MIAGRSGSAI AEIGSMK+ Sbjct: 201 GAIVAQQGAYQLSYFGADIFVVDLVGVLILRELGVLMTAIMIAGRSGSAITAEIGSMKMR 260 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE+DA++ +GL+ + +L+ PR+ AL+I+LP LTI+ANF+A+ G + W Y DIP A F Sbjct: 261 EEVDALKVIGLNPIGVLVFPRLVALVIALPCLTIIANFAALGGGIVAAWLYSDIPPAAFI 320 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 R L+ IF GLIKAPFMA IG +A EG VG + SLG+ VT VV+SI +VI Sbjct: 321 DRLRVAIDLSTIFAGLIKAPFMAMIIGTIASVEGMKVGGSAESLGQHVTASVVKSIFVVI 380 Query: 359 IIDSLFAIFYFAI 371 I+D LFA+FY AI Sbjct: 381 ILDGLFAMFYAAI 393 >gi|91976115|ref|YP_568774.1| hypothetical protein RPD_1636 [Rhodopseudomonas palustris BisB5] gi|91682571|gb|ABE38873.1| protein of unknown function DUF140 [Rhodopseudomonas palustris BisB5] Length = 383 Score = 301 bits (772), Expect = 1e-79, Method: Composition-based stats. Identities = 129/376 (34%), Positives = 198/376 (52%), Gaps = 11/376 (2%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 ++ AG+W + + V A + + +D+S + +DT GA LI Sbjct: 16 IARGEGLALCAAGSWTARFAPSLERIVADAEKLTGTRPNIFIDVSEVARLDTFGAWLIER 75 Query: 61 FMEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 + ++ G+S + L + + + +G+ Sbjct: 76 LRRNLTQDGVEARIAGLSANYASLVDEVRQVQ------PDVPAVASGGALRAPIEKLGRT 129 Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + F +D + +LG V++ F+ L S + + V VP+V+LI+F+ Sbjct: 130 MYVFADDIVALISMLGAVLAGVMRAILHPTTFR--LTSTVHHLEQVCWRAVPIVVLITFL 187 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G +IAQQG F +FGA++F +D++ +L LREIGVLL A+M+AGRSGSA AE+GSMK+ Sbjct: 188 IGCIIAQQGIFHFRRFGADVFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMKM 247 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EEIDA+RTMG D + +LI PR+ AL++++P+LT L SA+ G +V W Y + F Sbjct: 248 REEIDALRTMGFDPIDVLIVPRLIALLLAMPILTFLGAMSALYGGGLVAWLYGGVDPEAF 307 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 R ++ + G+IKAP MA IGIVA EG AV + SLG T VV+ I V Sbjct: 308 LLRLRDAISINHFTVGMIKAPVMALVIGIVACVEGLAVKGSAESLGSHTTASVVKGIFFV 367 Query: 358 IIIDSLFAIFYFAIGI 373 I++D +FAIF+ +IGI Sbjct: 368 IVMDGVFAIFFASIGI 383 >gi|39937298|ref|NP_949574.1| hypothetical protein RPA4238 [Rhodopseudomonas palustris CGA009] gi|39651156|emb|CAE29679.1| putative permease of ABC transporter [Rhodopseudomonas palustris CGA009] Length = 378 Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats. Identities = 136/375 (36%), Positives = 205/375 (54%), Gaps = 10/375 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++ + G W + + + + S +D++ I EIDTIGA ++ Sbjct: 11 ADGDTLELKPKGAWTATNSKFMEQLSQDVAPQIAAAKSLTIDMAEIGEIDTIGAWVLEKL 70 Query: 62 ME---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + + +G+ST +L + +R+ P N IG+ Sbjct: 71 SRSAAQAGRTAQFKGISTSYAELIDEVRQLNRRG-----PTPHPKPNPIIAKLDEIGRSA 125 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 D +LG + + + L SL Q+Y VG +P+++LI+F+ Sbjct: 126 WSATTDMAVFLEMLGALGAALLGVLRRPRSLR--LTSLTYQVYRVGWQAIPIMVLITFLI 183 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQG F +FGAE + +D++ IL LREIGVL+ A+M+AGRSGSA AE+GSMK+ Sbjct: 184 GAIIAQQGIFHFRKFGAESYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMR 243 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ TMGLD V +LI PRI AL+I+LP+L + + +A+ G + W Y + +VF Sbjct: 244 EEIDALSTMGLDPVEVLILPRIIALVIALPILAFVGSMAALYGGLLTAWFYGGMQPSVFI 303 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 +R H +L + G+ KAPFMA IGIVA EG V + SLG + TT VV+SI +VI Sbjct: 304 ARLHEAVSLNSFEVGMWKAPFMALVIGIVACSEGLRVKGSAESLGLQTTTSVVKSIFLVI 363 Query: 359 IIDSLFAIFYFAIGI 373 ++D LFA+F+ +IG+ Sbjct: 364 VLDGLFAVFFASIGM 378 >gi|77456265|ref|YP_345770.1| hypothetical protein Pfl01_0037 [Pseudomonas fluorescens Pf0-1] gi|77380268|gb|ABA71781.1| putative ABC transport system, permease [Pseudomonas fluorescens Pf0-1] Length = 382 Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats. Identities = 118/366 (32%), Positives = 197/366 (53%), Gaps = 7/366 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM--EKYH 66 R G+W +E+ + +N +++ +DL+ + +DT GA L++ + E+ Sbjct: 21 LRVTGDWTLAHYAEL-KQLSETLNGQYDANTP-IDLNGLGALDTAGASLLVELLGSERLG 78 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 + + +L+ +R P + + L IG+ + D+ Sbjct: 79 KSAEHPDCTISSAD-RALLQTVYRSLTDFCVPIKEPEISVSVQLLTRIGRAVDTVWQDTL 137 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 +GL++ +++ + +I + G+ P+V L++F+ GAV+A G Sbjct: 138 QLLGFVGLILETIARSLFRPKRWR--ITPMIAHIEQTGLDAAPIVALLTFLVGAVVAFLG 195 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A L+ FGA +F++DL+ LRE GVLLTA+++AGR+ SA A+IGSMK NEEIDAIRT Sbjct: 196 ATVLASFGASVFTVDLVGFAFLREFGVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRT 255 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +GLD + +L+ PR+ AL+++LP+LT LA I+G ++V DI A+F S S Sbjct: 256 LGLDPMELLVVPRVLALLVALPMLTFLAMICGIVGGAVVCAVSLDISPAMFLSLLQSDIG 315 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + + GL+KAP A I + EGF V + S+G T+ VVQSI +VI++D++ A+ Sbjct: 316 IQHFLVGLVKAPIFAFLIAAIGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVLDAVAAL 375 Query: 367 FYFAIG 372 F+ +G Sbjct: 376 FFMEMG 381 >gi|192293078|ref|YP_001993683.1| hypothetical protein Rpal_4717 [Rhodopseudomonas palustris TIE-1] gi|192286827|gb|ACF03208.1| protein of unknown function DUF140 [Rhodopseudomonas palustris TIE-1] Length = 382 Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats. Identities = 136/375 (36%), Positives = 205/375 (54%), Gaps = 10/375 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++ + G W + + + + S +D++ I EIDTIGA ++ Sbjct: 15 ADGDTLELKPKGAWTATNSKFMEQLSQDVAPQIAAAKSLTIDMAEIGEIDTIGAWVLEKL 74 Query: 62 ME---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + + +G+ST +L + +R+ P N IG+ Sbjct: 75 SRSAAQAGRTAQFKGISTSYAELIDEVRQLNRRG-----PTPHPKPNPIIAKLDEIGRSA 129 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 D +LG + + + L SL Q+Y VG +P+++LI+F+ Sbjct: 130 WSATTDMAVFLEMLGALGAALLGVLRRPRSLR--LTSLTYQVYRVGWQAIPIMVLITFLI 187 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQG F +FGAE + +D++ IL LREIGVL+ A+M+AGRSGSA AE+GSMK+ Sbjct: 188 GAIIAQQGIFHFRKFGAESYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMR 247 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ TMGLD V +LI PRI AL+I+LP+L + + +A+ G + W Y + +VF Sbjct: 248 EEIDALSTMGLDPVEVLILPRIIALVIALPILAFVGSMAALYGGLLTAWFYGGMQPSVFI 307 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 +R H +L + G+ KAPFMA IGIVA EG V + SLG + TT VV+SI +VI Sbjct: 308 ARLHEAVSLNSFEVGMWKAPFMALVIGIVACSEGLRVKGSAESLGLQTTTSVVKSIFLVI 367 Query: 359 IIDSLFAIFYFAIGI 373 ++D LFA+F+ +IG+ Sbjct: 368 VLDGLFAVFFASIGM 382 >gi|171322064|ref|ZP_02910936.1| protein of unknown function DUF140 [Burkholderia ambifaria MEX-5] gi|171092626|gb|EDT37930.1| protein of unknown function DUF140 [Burkholderia ambifaria MEX-5] Length = 427 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 100/366 (27%), Positives = 172/366 (46%), Gaps = 11/366 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R G W + ++ V + + DLS I +D +G + + + G Sbjct: 72 TVRLYGQWTALALARNRGAVARRVAGIATGRVSEWDLSGIERLDHVGGQALW----RVWG 127 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + GV+ Q ++ R + + P+R + G + F Sbjct: 128 RKLPDGVALSPTQ-RTIFERIERLDSQREAPERVVHFGPITRF----GFMLFAFAEHLQG 182 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + GLVI + +Y G +P+ L++F+ G V++ A Sbjct: 183 GIAMFGLVILDALSVLRRPNTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 240 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M Sbjct: 241 QQLQTFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 300 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ LI PR+ AL +++PLL + N A+ G ++ I F + Sbjct: 301 GIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDINYFVRSLPGVVPI 360 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN++ G+ K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI Sbjct: 361 ANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIL 420 Query: 368 YFAIGI 373 + +G+ Sbjct: 421 FQNVGL 426 >gi|312958198|ref|ZP_07772721.1| ABC transport system permease protein [Pseudomonas fluorescens WH6] gi|311287629|gb|EFQ66187.1| ABC transport system permease protein [Pseudomonas fluorescens WH6] Length = 382 Score = 301 bits (770), Expect = 2e-79, Method: Composition-based stats. Identities = 118/365 (32%), Positives = 197/365 (53%), Gaps = 5/365 (1%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + R G+W + + + ++ + A +DL+ + +DT GA L++ + Sbjct: 20 LLRITGDWTLAHYANL-KKLADKLDGQYDAG-ARIDLNGLGALDTAGASLLVELLGPTRI 77 Query: 68 KIKLQGVSTHI-EQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 + + + +L+ +R P+++ + L IG+ + DS Sbjct: 78 EQSAEQTDCTLSAADRALLKTVYRSLNDFCVPEKAPEETAGMQLLARIGRAVDTVWQDSK 137 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 +GL++ +++ + ++ + VG+ P+V L++F+ GAV+A G Sbjct: 138 QLLGFIGLILETFARGIFRPKRWR--ITPMVAHLEQVGLDAAPIVALLTFLVGAVVAFLG 195 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A L FGA IF++DL++ LRE GVLLTA++IAGR+ SA A+IGSMK NEEIDAIRT Sbjct: 196 ATVLKSFGATIFTVDLVAFSFLREFGVLLTAILIAGRTASAFTAQIGSMKANEEIDAIRT 255 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +GLD + +L+ PR+ AL+++LP+LT LA S I+G +V DI A+F S S Sbjct: 256 LGLDPMELLVLPRVLALLVALPMLTFLAMLSGIVGGGVVCAVALDISPAMFLSLLQSDIG 315 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + + G++KAP A I + EGF V + S+G T+ VVQSI +VI++D++ A+ Sbjct: 316 VQHFLVGMVKAPIFAFLIAAIGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVLDAVAAL 375 Query: 367 FYFAI 371 F+ + Sbjct: 376 FFMEM 380 >gi|316935758|ref|YP_004110740.1| hypothetical protein Rpdx1_4456 [Rhodopseudomonas palustris DX-1] gi|315603472|gb|ADU46007.1| protein of unknown function DUF140 [Rhodopseudomonas palustris DX-1] Length = 382 Score = 301 bits (770), Expect = 2e-79, Method: Composition-based stats. Identities = 135/374 (36%), Positives = 203/374 (54%), Gaps = 10/374 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + G W + + A + + S +D++AI EIDTIGA ++ Sbjct: 16 DGDTLELEPTGAWTATNSKIMEQLSAGAAQQIASAKSLTIDMAAIGEIDTIGAWVLEKLS 75 Query: 63 E---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 + + +G++ +L + +R+ P N IG+ Sbjct: 76 RSAAEAGSPAQFKGIADSYAELIDEVRQLNRRG-----PTPHPKPNPIIAKLDEIGRSAW 130 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 D +LG + + L SL Q+Y VG +P+++LI+F+ G Sbjct: 131 SATADIAVFLQMLGALGVAVLGVLRRPRSLR--LTSLTYQVYRVGWQAIPIMVLITFLIG 188 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 A+IAQQG F +FGA+ + +D++ IL LREIGVL+ A+M+AGRSGSA AE+GSMK+ E Sbjct: 189 AIIAQQGIFHFRKFGADSYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMRE 248 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDA+ TMGLD V +LI PRI AL+I+LP+L + + +A+ G + W Y + +VF + Sbjct: 249 EIDALSTMGLDPVEVLILPRIIALVIALPILAFIGSMAALYGGLLTAWFYGGMQPSVFIA 308 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 R H +L + G+ KAPFMA IGIVA EG V + SLG + TT VV+SI +VI+ Sbjct: 309 RLHEAVSLNSFQVGMWKAPFMALVIGIVACSEGLRVKGSAESLGLQTTTSVVKSIFLVIV 368 Query: 360 IDSLFAIFYFAIGI 373 +D LFA+F+ +IG+ Sbjct: 369 LDGLFAVFFASIGM 382 >gi|182680563|ref|YP_001834709.1| hypothetical protein Bind_3668 [Beijerinckia indica subsp. indica ATCC 9039] gi|182636446|gb|ACB97220.1| protein of unknown function DUF140 [Beijerinckia indica subsp. indica ATCC 9039] Length = 377 Score = 301 bits (770), Expect = 2e-79, Method: Composition-based stats. Identities = 144/365 (39%), Positives = 216/365 (59%), Gaps = 7/365 (1%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 F AG+W + + ++ A+ +L+ + +DT GA LI ++ Sbjct: 17 HFSLAGHWTLEWSKGLESAAADLLKALGKARKAVFNLAGVERLDTAGAWLI----DRTRR 72 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF-KNLHYHIGKKIVKFINDSC 126 + +GVST ++ + ++ P+ SF GK +V+ ++ Sbjct: 73 NLSERGVSTELDHVRPEYGILFQEAHFRTFPEPKRQNASFFVAPLVETGKTVVEAGRETL 132 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 LG I++ + F+G +SL+ Q+ +G+ VP++ LI+F+ G ++AQQG Sbjct: 133 RGMSFLGEAIASLAQSFVQRQHFRG--ISLVYQIETIGLRSVPIITLINFLVGCIVAQQG 190 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 FQL +FGA F++DL+ IL LRE+GVLLT++MIAGRSGSAI AEIGSMK+ EEIDA+ Sbjct: 191 LFQLRRFGASTFAVDLLGILTLRELGVLLTSIMIAGRSGSAITAEIGSMKMREEIDALTV 250 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MGL + +LI PR+ AL+ISLPLLT +A+ +A+ G +V + Y I F +R H + Sbjct: 251 MGLRPIEVLIVPRLLALVISLPLLTFIADMAALAGGLLVSYSYGGIQPVAFLNRLHDAIS 310 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L +TGLIKAPFMA IG++A EGFAV + SLG++VTT VV+SI +VI++D LFA+ Sbjct: 311 LHTFYTGLIKAPFMALVIGLIAAVEGFAVEGSAESLGRQVTTSVVKSIFMVIVLDGLFAM 370 Query: 367 FYFAI 371 F+ I Sbjct: 371 FFAGI 375 >gi|154252954|ref|YP_001413778.1| hypothetical protein Plav_2512 [Parvibaculum lavamentivorans DS-1] gi|154156904|gb|ABS64121.1| protein of unknown function DUF140 [Parvibaculum lavamentivorans DS-1] Length = 387 Score = 301 bits (770), Expect = 2e-79, Method: Composition-based stats. Identities = 129/375 (34%), Positives = 204/375 (54%), Gaps = 11/375 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++ + AG+W + + + AI + AI+ IT DT A ++ Sbjct: 21 ADGNVLRIEAAGDWSIVHLDPVDRQL-RAIGARPGTGRAIIGFKDITRFDTAAAAILGRT 79 Query: 62 ---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + + K+ + VS L I +P + + IG + Sbjct: 80 AAHLGEQGIKVDFEDVSDAQRLLLDKIDS-----CGMPEPAHVPWRPLHIQIIDKIGATM 134 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + + +G V++ G A + + + M G +P+V L++F+ Sbjct: 135 RDIGAEGLAMLGFVGAVMATAGRTIARPSRLR--WTPFVHHMEKAGFDALPLVCLLTFLI 192 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GAV+AQQGA QL QFGAE+F+++L++I+ LRE+G+LLTA+++AGRSGSA AEIGSMK+ Sbjct: 193 GAVVAQQGAVQLRQFGAEVFTVNLIAIIFLREVGLLLTAIIVAGRSGSAFTAEIGSMKMR 252 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+RT+GLD + +L+ PR+ AL+++LPLLT +A+ +IG +V+ D+P V+ Sbjct: 253 EEIDAMRTLGLDPMEMLVLPRVLALMVTLPLLTFVADIMGLIGGGLVVQVMLDMPPGVYI 312 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR GL+KAPFMA I +V + G +V + S+G T VV+SI +VI Sbjct: 313 SRVQEAVGFWTFGVGLVKAPFMAVVIALVGCRSGLSVTGSAESVGAMTTRSVVRSIFLVI 372 Query: 359 IIDSLFAIFYFAIGI 373 I+D+LFA+F+ A+GI Sbjct: 373 ILDALFAMFFTAVGI 387 >gi|294010007|ref|YP_003543467.1| ABC-type transport system permease component LinK [Sphingobium japonicum UT26S] gi|292673337|dbj|BAI94855.1| ABC-type transport system permease component LinK [Sphingobium japonicum UT26S] Length = 376 Score = 301 bits (770), Expect = 2e-79, Method: Composition-based stats. Identities = 114/370 (30%), Positives = 195/370 (52%), Gaps = 14/370 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 G TV R +GN + ++ D + +I+ +DLS + +DTIGA ++ + Sbjct: 19 REGRTVIRLSGNLSIACLHDLPDRL-----DAIEGPVDTIDLSDVGHMDTIGAWVLHRAI 73 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ + G E+L + + R ++ + IG+ +V Sbjct: 74 KRL--DCGITGDKCDAERLIATVGSVDEPVNI-----RPDHEPPWQRVVGQIGEAVVNSG 126 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 G + T +F+ + +++++ VGVS + ++ L+SF+ G VI Sbjct: 127 TTLLGLLGFFGGTLVATWNVIRHPGRFR--INAVVQRFEVVGVSALGIIGLMSFLIGIVI 184 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQG+ QL QFG E+ +I+L+ L RE+GVL+TA+M+AGRSGSA A++G+MK+ EE+D Sbjct: 185 AQQGSVQLRQFGMEMLTINLVGRLTFRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEVD 244 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+RT+G+ + L+ PR A+++ +PLL ++ AIIG + DIP F R Sbjct: 245 AMRTIGVSPMEALVLPRTLAVVVMMPLLGFYSSIVAIIGGGFLCAVSLDIPPITFVQRLR 304 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + +++ GLIKAP I + +G V ++ +G + T VVQ+I +VI+ID+ Sbjct: 305 EVVPIHDLWVGLIKAPVFGVIIALAGCFQGMQVKANAEEVGLRTTAAVVQAIFLVIVIDA 364 Query: 363 LFAIFYFAIG 372 FA+F+ +G Sbjct: 365 FFAVFFTWVG 374 >gi|307945713|ref|ZP_07661049.1| ABC transporter permease protein [Roseibium sp. TrichSKD4] gi|307771586|gb|EFO30811.1| ABC transporter permease protein [Roseibium sp. TrichSKD4] Length = 382 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 134/369 (36%), Positives = 214/369 (57%), Gaps = 12/369 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY-- 65 V +G+W ++E V + + +D SAI +DT GA L+ Sbjct: 23 VLCLSGDWTISSLAEAERLVESIMLDKYR--VTCLDTSAIDNLDTSGAWLVHRLRGSLEY 80 Query: 66 -HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 +++L G++ + LF I H + K +K + S GK++V D Sbjct: 81 QGRRVELIGLTENRFNLFCQIERHHPPEYKPEKSKVS-----LVGFLEATGKQVVNVGRD 135 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + HILG + + +G +++ Q + VP+V L+SF+ GA+I+Q Sbjct: 136 AIAMLHILGSLGVVLSTVLLQPKRLRGIAVAV--QFDRTCIGAVPIVALMSFLIGAIISQ 193 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG F L QFGA+I+ +DL IL LREIGV+LTA+M+AGRSGSA AE+G+M++ EE+DA+ Sbjct: 194 QGGFYLRQFGADIYVVDLAGILVLREIGVILTAIMVAGRSGSAFTAELGAMRMQEEVDAL 253 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 +GL +L+ PRI AL+I+LP+LT +A+ +A++GA + W Y DIP A + ++ + Sbjct: 254 HVIGLSVTEVLVLPRILALMIALPVLTFIADMAALVGAGLTTWVYLDIPPAAYLTQLQAA 313 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 T+ ++ G++KAPFMA IG++A EG VG + SLG+ T VV++I +VI++D +F Sbjct: 314 ITMKTLWVGIVKAPFMALIIGLIACVEGLKVGGSAESLGRHTTMSVVKAIFLVIVVDGVF 373 Query: 365 AIFYFAIGI 373 AIF+ +I + Sbjct: 374 AIFFASINV 382 >gi|254502466|ref|ZP_05114617.1| conserved domain protein [Labrenzia alexandrii DFL-11] gi|222438537|gb|EEE45216.1| conserved domain protein [Labrenzia alexandrii DFL-11] Length = 382 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 138/375 (36%), Positives = 211/375 (56%), Gaps = 12/375 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 G +G+W +++ + + +D+S + +DT GA LI Sbjct: 17 DSEGHQSLILSGDWTVSTLADADQQISKL--NVAKDKLTCIDVSEVDHLDTSGAWLIHRT 74 Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + K++L GV+ E LF I H +P RS F G+++ Sbjct: 75 RGQLEFSGRKVQLTGVTPVRESLFHEIEKHHP---PRWQPDRSGFT--IVGFLEATGRQM 129 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 V+ D+ + HILG + + + +++ Q + VP+V L+SF+ Sbjct: 130 VEVYKDTLAMLHILGSLGIVLSTVLLQPKRLRSIAIAV--QFDRSCIGAVPIVALMSFLI 187 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+I+QQG F L QFGA+IF +DL IL LREIGV+LTA+M+AGRSGSA AE+G+M++ Sbjct: 188 GAIISQQGGFYLRQFGADIFVVDLAGILVLREIGVILTAIMVAGRSGSAFTAELGAMRMQ 247 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE+DA+ +GL +L+ PRI AL+I+LP+LT +A+ SA+ GA ++ W Y DIP A F Sbjct: 248 EEVDALHVIGLSVTEVLVLPRILALMIALPILTFVADISALFGAGLITWAYLDIPPAAFL 307 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 ++ S T+ G+IKAPFMA +G++A EG V S SLG+ T VV++I +VI Sbjct: 308 TQLQSAITVNTFVVGIIKAPFMALIVGLIACVEGLKVEGSSESLGRHTTMAVVKAIFLVI 367 Query: 359 IIDSLFAIFYFAIGI 373 ++D +FA+F+ AIG+ Sbjct: 368 VVDGMFAMFFAAIGV 382 >gi|166713439|ref|ZP_02244646.1| ABC transporter permease [Xanthomonas oryzae pv. oryzicola BLS256] Length = 370 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 120/364 (32%), Positives = 193/364 (53%), Gaps = 13/364 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R AG+W A+ + +++ +D I ++D+ G ++ F + K Sbjct: 19 LRLAGSWVLATALPQAE-----LLQTVPDGVRRIDARGIQQLDSAGVLQLLRFASRMGLK 73 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + +L+ + KP+R + F +G+ + D Sbjct: 74 EDAIDFRDEHQ---ALVCTIEELNDERPKPKRDY---GFVAALDRLGRATHRIGQDILEL 127 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + +F+ L S + M VG+ VP+V+L+S++ GAVIA G+ Sbjct: 128 NSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFLGST 185 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAIRT+G Sbjct: 186 ILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIRTLG 245 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD + +L+ PR+ ALI +LPLLT +A + + G V DIP ++ +R H T L Sbjct: 246 LDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHETIQLR 305 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ A+++ Sbjct: 306 HFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWF 365 Query: 369 FAIG 372 +G Sbjct: 366 MKMG 369 >gi|289662615|ref|ZP_06484196.1| ABC transporter permease [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289668440|ref|ZP_06489515.1| ABC transporter permease [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 370 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 120/364 (32%), Positives = 193/364 (53%), Gaps = 13/364 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R AG+W A+ + +++ +D I ++D+ G ++ F + K Sbjct: 19 LRLAGSWVLATALPQAE-----LLQTVPDGVRRIDARGIQQLDSAGVLQLLRFASRMGLK 73 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + +L+ + KP+R + F +G+ + D Sbjct: 74 EDAIDFRDEHQ---ALVCTIEELNDERPKPKRDY---GFVAALDRLGRATHRVGQDILEL 127 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + +F+ L S + M VG+ VP+V+L+S++ GAVIA G+ Sbjct: 128 NSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFLGST 185 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAIRT+G Sbjct: 186 ILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIRTLG 245 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD + +L+ PR+ ALI +LPLLT +A + + G V DIP ++ +R H T L Sbjct: 246 LDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDTIQLR 305 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ A+++ Sbjct: 306 HFLVGLSKAPLFALVIGLIGCLEGLKVTGTAQSVGERTTSSVVQTISLVIILDAIAALWF 365 Query: 369 FAIG 372 +G Sbjct: 366 MKMG 369 >gi|260463968|ref|ZP_05812164.1| protein of unknown function DUF140 [Mesorhizobium opportunistum WSM2075] gi|259030343|gb|EEW31623.1| protein of unknown function DUF140 [Mesorhizobium opportunistum WSM2075] Length = 395 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 154/373 (41%), Positives = 223/373 (59%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 E G+ F+G W + ++ + D + I K + +DLS I +IDT GA LI Sbjct: 27 EEGGVLGCAFSGVWTTRTVA-LIDADMRKIEKRSGFKTLALDLSKIEKIDTAGAWLIDRL 85 Query: 62 M---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + EK + +++LQG S L + R+ + + N +G+++ Sbjct: 86 VSVFEKKNVEVQLQGRSEIASILLDAVGEAVRR---EPESGPARPPNIVLRALEAVGRRV 142 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + +D + +ILG I + ++ Q+ +GV +PVV+L+S + Sbjct: 143 YEMRDDFLASMNILGATIRGAQMKLGRGHAVNP--AAIFNQIDRMGVGAIPVVVLMSAIV 200 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA++AQQGA+QLS FGA+IF +DL+ +L LRE+GVL+TA+MIAGRSGSAI AEIGSMK+ Sbjct: 201 GAIVAQQGAYQLSYFGADIFVVDLVGVLILRELGVLMTAIMIAGRSGSAITAEIGSMKMR 260 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE+DA++ +GL+ + +L+ PR+ AL+I+LP LTI+ANF+A+ G W Y DIP A F Sbjct: 261 EEVDALKVIGLNPIGVLVFPRLVALVIALPCLTIIANFAALGGGIAAAWLYSDIPPAAFL 320 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 R L+ IF GLIKAPFMA IG +A EG VG + SLG+ VT VV+SI +VI Sbjct: 321 DRLRVAIDLSTIFAGLIKAPFMAMIIGTIASVEGMKVGGSAESLGQHVTASVVKSIFVVI 380 Query: 359 IIDSLFAIFYFAI 371 I+D LFA+FY AI Sbjct: 381 ILDGLFAMFYAAI 393 >gi|238784662|ref|ZP_04628667.1| ABC transporter, permease protein [Yersinia bercovieri ATCC 43970] gi|238714434|gb|EEQ06441.1| ABC transporter, permease protein [Yersinia bercovieri ATCC 43970] Length = 381 Score = 300 bits (768), Expect = 3e-79, Method: Composition-based stats. Identities = 120/361 (33%), Positives = 197/361 (54%), Gaps = 6/361 (1%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72 G+W + +V ++ + + DLS + +DT GA L++ + + K +L+ Sbjct: 25 GDWVLAHYRALEPEVTQL--RANLPAAVVFDLSQLGALDTAGATLLVLLLGEERVK-QLR 81 Query: 73 GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF-KNLHYHIGKKIVKFINDSCSQAHI 131 ++ + ++ T + + P+ + F L +IG+ + D S Sbjct: 82 KLAPTLPDERRVLLETVSHVLPDLTPEPATKAPPFWLELLSNIGRSMDNLWQDIKSLLGF 141 Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +GL + +++ + SLI + +G++ VP+++L++F+ GAVIA GA L+ Sbjct: 142 VGLTLEALLSTIFRPSRWR--MTSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLT 199 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 FGA IF++DL+ LRE VLLTA+++AGR+ SA AEIG MK NEEIDAI+T+GL+ Sbjct: 200 TFGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNP 259 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V +L+ PR+ AL+ISLP+LT + I G +V DI +F S ++ L + Sbjct: 260 VELLVLPRVLALLISLPMLTFIGMICGIFGGMVVCALTLDISPTMFLSIMQNSNGLQHFL 319 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 G+ KAP A I I+ EGF V + S+G TT VV SI +VI++D++ A+F+ + Sbjct: 320 VGISKAPVFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEM 379 Query: 372 G 372 G Sbjct: 380 G 380 >gi|241661797|ref|YP_002980157.1| hypothetical protein Rpic12D_0175 [Ralstonia pickettii 12D] gi|240863824|gb|ACS61485.1| protein of unknown function DUF140 [Ralstonia pickettii 12D] Length = 374 Score = 300 bits (768), Expect = 3e-79, Method: Composition-based stats. Identities = 101/371 (27%), Positives = 187/371 (50%), Gaps = 12/371 (3%) Query: 4 NGITVFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +G +V +G+W + ++E A ++ ++ L+ + ID GA+L+ Sbjct: 15 DGRSVAFLSGDWTTLALAERAGVRSARQQIRAGLDNANAWCLTEVGRIDHFGAQLLW--- 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + G + + +Q ++ + K + + N L G+ ++ F Sbjct: 72 -RAWGNQWPEHLDARPDQ-RRMLDRVAKLDPGGWKQRLAPRMNPVAIL----GEGMLDFF 125 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + + + ++G ++ + G F + + +G + +Y G + + L+ F+ G V+ Sbjct: 126 DHASNGIAMVGQLVFDLGRFVRAPH--RGPWREISANIYSTGYKALGITALVGFLIGIVL 183 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + A QL FGA IF ++++ + +RE+G +L A+++AGRSGSAI A+IG M++ EE+D Sbjct: 184 SYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELD 243 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R MG+ LI P++ AL I++PLL + A+ G + DI F + Sbjct: 244 AMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITSLP 303 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 +AN++ G+ K I +VA G + ++ SLG+ TT VV SI+IVI+ D+ Sbjct: 304 DAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIVILADA 363 Query: 363 LFAIFYFAIGI 373 +FAI + +GI Sbjct: 364 VFAILFKDVGI 374 >gi|17987248|ref|NP_539882.1| toluene tolerance protein Ttg2B [Brucella melitensis bv. 1 str. 16M] gi|17982923|gb|AAL52146.1| toluene tolerance protein ttg2b [Brucella melitensis bv. 1 str. 16M] Length = 390 Score = 300 bits (768), Expect = 3e-79, Method: Composition-based stats. Identities = 159/373 (42%), Positives = 229/373 (61%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G+ V +G W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 22 EQDGMRVIHLSGPWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 80 Query: 62 MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ K ++L+GV L + + + + + FF+ +F N+ +G + Sbjct: 81 RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 137 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ND HILG I G + +++ QM +GV +P+V+L+S + Sbjct: 138 ISMFNDFKMAMHILGATIR--GAQLKYGRGNGIPIAAIVTQMDRMGVGAIPIVVLMSTIV 195 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 196 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 255 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F Sbjct: 256 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 315 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 316 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 375 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 376 VVDGLFAMFYAAI 388 >gi|189024185|ref|YP_001934953.1| Sulfate transporter/antisigma-factor [Brucella abortus S19] gi|189019757|gb|ACD72479.1| Sulfate transporter/antisigma-factor [Brucella abortus S19] Length = 390 Score = 300 bits (768), Expect = 3e-79, Method: Composition-based stats. Identities = 159/373 (42%), Positives = 230/373 (61%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 22 EQDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 80 Query: 62 MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ K ++L+GV L + + + + + FF+ +F N+ +G + Sbjct: 81 RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 137 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ND HILG I G + +++ QM +GV +P+V+L+S + Sbjct: 138 ISMFNDFKMAMHILGATIR--GAQLKYGRGNGIPIAAIVTQMDRMGVGAIPIVVLMSTIV 195 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 196 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 255 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F Sbjct: 256 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 315 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 316 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 375 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 376 VVDGLFAMFYAAI 388 >gi|91975833|ref|YP_568492.1| hypothetical protein RPD_1353 [Rhodopseudomonas palustris BisB5] gi|91682289|gb|ABE38591.1| protein of unknown function DUF140 [Rhodopseudomonas palustris BisB5] Length = 378 Score = 300 bits (768), Expect = 3e-79, Method: Composition-based stats. Identities = 136/376 (36%), Positives = 202/376 (53%), Gaps = 10/376 (2%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM- 59 +++ + G W + + + + + + S +D++ + EIDTIGA L+ Sbjct: 10 VTDGDVLELHPGGAWIASQSAALERLFEGVAPQVAAAKSLKIDMTEVIEIDTIGAWLLEK 69 Query: 60 --YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 + GV L + +R +P N +G+ Sbjct: 70 ASREAAQAGRTAHFVGVGERYAGLIEEVRQVNR-----HRPTPKPKVNPIIARLDQVGRS 124 Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 D + G + + L SL Q+Y VG +P+V+LI+F+ Sbjct: 125 AWSATQDIAVFLDMFGALGVALLGVLRRPRSLR--LTSLTYQIYRVGWRAIPIVVLITFL 182 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 GA+IAQQG F +FGAE + +D++ IL LREIGVL+ A+M+AGRSGSA AE+GSMK+ Sbjct: 183 IGAIIAQQGIFHFRKFGAESYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKM 242 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EEIDA+ TMGLD V +LI PRI AL+I+LP+LT + + SA+ G + W Y + AV+ Sbjct: 243 REEIDALSTMGLDPVEVLILPRIIALVIALPILTFIGSMSALYGGLLTAWFYGGMQPAVY 302 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 +R H +L + G+ KAPFMA IGIVA EG V + SLG + TT VV+SI +V Sbjct: 303 IARLHEAVSLNSFEVGIWKAPFMALVIGIVACSEGLRVKGSAESLGLQTTTSVVKSIFLV 362 Query: 358 IIIDSLFAIFYFAIGI 373 I++D LFA+F+ +IG+ Sbjct: 363 IVLDGLFAVFFASIGL 378 >gi|254247077|ref|ZP_04940398.1| hypothetical protein BCPG_01856 [Burkholderia cenocepacia PC184] gi|124871853|gb|EAY63569.1| hypothetical protein BCPG_01856 [Burkholderia cenocepacia PC184] Length = 425 Score = 300 bits (768), Expect = 3e-79, Method: Composition-based stats. Identities = 102/366 (27%), Positives = 174/366 (47%), Gaps = 11/366 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R G W + ++ V I + DLS I +D +G + + + G Sbjct: 70 TVRLTGQWTALSLARNRGAVARRIASIAAGRVSEWDLSGIERLDHVGGQALW----RVWG 125 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + GV+ Q ++ R + + P+R ++ L G I F Sbjct: 126 RKLPAGVALSATQ-RTIFERIERLDSEREAPERIVRFDPVTRL----GLAIFAFGEHLQG 180 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + G VI + + +Y G +P+ L++F+ G V++ A Sbjct: 181 GIAMFGRVILDALSVLRRPKTMP--WKEISANIYSAGAQALPITALVAFLIGIVLSYLSA 238 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M Sbjct: 239 QQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 298 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ LI PR+ AL +++PLL + N A+ G ++ I F + Sbjct: 299 GIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKLVLGIDINYFVRSLPGVVPI 358 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN++ G+ K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI Sbjct: 359 ANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIL 418 Query: 368 YFAIGI 373 + +G+ Sbjct: 419 FQNVGL 424 >gi|83858858|ref|ZP_00952380.1| ABC transporter, permease protein, putative [Oceanicaulis alexandrii HTCC2633] gi|83853681|gb|EAP91533.1| ABC transporter, permease protein, putative [Oceanicaulis alexandrii HTCC2633] Length = 384 Score = 300 bits (768), Expect = 3e-79, Method: Composition-based stats. Identities = 114/372 (30%), Positives = 181/372 (48%), Gaps = 5/372 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + + G+W + D + I ++DLS + IDT GA ++ Sbjct: 18 QDGARLIVEPKGDWLMEAVGR-FDRRLRRIESETDPKDLVIDLSGLGRIDTAGAYVLGRT 76 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + + + + ++ ++ P+ + IG+ + Sbjct: 77 LSRCREPDADRHFIGEHQTARRMMGEMLQRLADC--PEDEIQPRGVISTLARIGQGVEDG 134 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + ++ G + + K + S I M GV +P++ ++SF GAV Sbjct: 135 LKETVESFAFFGRTFTTGLSVLVNPTKMR--WTSTIHLMETAGVDALPIISVLSFFIGAV 192 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A GA L FGA +F++DL+ I LRE GV++TA+++AGRS SA A IGSMK+ +EI Sbjct: 193 VAFMGASLLETFGASVFTVDLVGIAVLREFGVIITAILLAGRSDSAFTAAIGSMKMQQEI 252 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA++ MGLD +L+ PR+ A ++ PLLT+ A + + G +V W DI F +R Sbjct: 253 DAMKVMGLDPYEVLVLPRVIACVVMAPLLTLSAMVAGVFGGMLVSWMTLDISPNFFLTRL 312 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + T L + G+ KAP I IV + G VG SLGK+VTT VVQ+I VI+ID Sbjct: 313 NDTIDLKHFLVGMSKAPVFGLVIAIVGCRHGLQVGGDVESLGKRVTTSVVQAIFAVIVID 372 Query: 362 SLFAIFYFAIGI 373 +LFA+ Y + I Sbjct: 373 ALFAMMYLELDI 384 >gi|85707661|ref|ZP_01038727.1| ABC-type transport system permease component [Erythrobacter sp. NAP1] gi|85689195|gb|EAQ29198.1| ABC-type transport system permease component [Erythrobacter sp. NAP1] Length = 370 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 115/371 (30%), Positives = 190/371 (51%), Gaps = 14/371 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 E G T+ +G I ++ ++ + + VDLS + E+DT+GA ++ F Sbjct: 12 EEGGGTMLALSGPLLVSTIGKLERELSR-----LGHEVGRVDLSDVEEMDTVGAWVVCRF 66 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 H + G + ++L + ++ + +G+K+ Sbjct: 67 A--THQSAAITGTTPSAKRLLEAVEAASSDVEITPD-----RTPVWERVPLALGEKVYAA 119 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + G ++ G F L + +RQM VGV+ +P++ L+SF+ G V Sbjct: 120 RSGVYGVVGFFGQILIGFGSLLRHPSTFP--LKATVRQMEMVGVAALPIIGLMSFLIGIV 177 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IAQQGA QL+QFGAE +++L+ + LRE+GVL+TA+M+AGRSGSA A+IG+MK+ EE+ Sbjct: 178 IAQQGAVQLAQFGAETLTVNLVGRITLRELGVLMTAIMVAGRSGSAFAAQIGTMKLTEEV 237 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+RT+G+ + L+ PRI A + +L A+ I+G ++V IPF F R Sbjct: 238 DAMRTIGISPIERLVIPRILACTFMMVVLGFYASIVGIVGGAVVGHLSLGIPFFTFLERI 297 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 L +++ GL+KAP + + G V +S +G + T VV +I VI++D Sbjct: 298 QEVVPLHDVWVGLVKAPVFGLIVALAGCYHGMQVKGNSEQVGIRTTMAVVSAIFAVIVLD 357 Query: 362 SLFAIFYFAIG 372 + FA+F+ IG Sbjct: 358 AFFAVFFTEIG 368 >gi|86748498|ref|YP_484994.1| hypothetical protein RPB_1373 [Rhodopseudomonas palustris HaA2] gi|86571526|gb|ABD06083.1| Protein of unknown function DUF140 [Rhodopseudomonas palustris HaA2] Length = 378 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 136/376 (36%), Positives = 206/376 (54%), Gaps = 10/376 (2%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +++ + G W + + + ++ + + +D++ + EIDTIGA L+ Sbjct: 10 VTQGDVLRLHPGGAWIAMHTAVLERLFDGVASQVAAAKALEIDMTDVVEIDTIGAWLLEK 69 Query: 61 FME---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 + + GV+ L + +R+ P+ N IG+ Sbjct: 70 VSRDAAQAGRTAQFVGVADRYAGLIEEVRQVNRRG-----PKPRPSVNPIIARLDQIGRS 124 Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 D +LG + + L SL Q+Y VG +P+V+LI+F+ Sbjct: 125 AWSATQDISVFLAMLGALGVALLGVLRRPRSLR--LTSLTYQVYRVGWQAIPIVVLITFL 182 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 GA+IAQQG F +FGAE + +D++ IL LREIGVL+ A+M+AGRSGSA AE+GSMK+ Sbjct: 183 IGAIIAQQGIFHFRKFGAESYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKM 242 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EEIDA+ TMGLD V +LI PRI AL+I+LP+LT + + +A+ G + W Y + AV+ Sbjct: 243 REEIDALTTMGLDPVEVLILPRIIALVIALPILTFIGSMAALYGGLLTAWFYGGMQPAVY 302 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 +R H +L + G+ KAPFMA IGIVA EG V + SLG + TT VV+SI +V Sbjct: 303 IARLHEAVSLNSFEVGIWKAPFMALVIGIVACSEGLRVKGSAESLGLQTTTSVVKSIFLV 362 Query: 358 IIIDSLFAIFYFAIGI 373 I++D LFA+F+ +IG+ Sbjct: 363 IVLDGLFAVFFASIGM 378 >gi|23501899|ref|NP_698026.1| toulene ABC transporter permease [Brucella suis 1330] gi|62289942|ref|YP_221735.1| toulene ABC transporter permease [Brucella abortus bv. 1 str. 9-941] gi|82699870|ref|YP_414444.1| sulfate transporter [Brucella melitensis biovar Abortus 2308] gi|237815443|ref|ZP_04594441.1| toulene ABC transporter, permease protein [Brucella abortus str. 2308 A] gi|254697384|ref|ZP_05159212.1| Sulfate transporter/antisigma-factor [Brucella abortus bv. 2 str. 86/8/59] gi|254706786|ref|ZP_05168614.1| Sulfate transporter/antisigma-factor [Brucella pinnipedialis M163/99/10] gi|254730282|ref|ZP_05188860.1| Sulfate transporter/antisigma-factor [Brucella abortus bv. 4 str. 292] gi|256031600|ref|ZP_05445214.1| Sulfate transporter/antisigma-factor [Brucella pinnipedialis M292/94/1] gi|256159738|ref|ZP_05457485.1| Sulfate transporter/antisigma-factor [Brucella ceti M490/95/1] gi|256255000|ref|ZP_05460536.1| Sulfate transporter/antisigma-factor [Brucella ceti B1/94] gi|256257499|ref|ZP_05463035.1| Sulfate transporter/antisigma-factor [Brucella abortus bv. 9 str. C68] gi|256369443|ref|YP_003106951.1| toluene ABC transporter, permease protein, putative [Brucella microti CCM 4915] gi|260545309|ref|ZP_05821050.1| sulfate transporter/antisigma-factor [Brucella abortus NCTC 8038] gi|260757978|ref|ZP_05870326.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260761801|ref|ZP_05874144.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260883775|ref|ZP_05895389.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|261222188|ref|ZP_05936469.1| conserved hypothetical protein [Brucella ceti B1/94] gi|261314254|ref|ZP_05953451.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|265988688|ref|ZP_06101245.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] gi|265998152|ref|ZP_06110709.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|297248343|ref|ZP_06932061.1| ABC transport system permease [Brucella abortus bv. 5 str. B3196] gi|23347840|gb|AAN29941.1| toulene ABC transporter, permease protein, putative [Brucella suis 1330] gi|62196074|gb|AAX74374.1| hypothetical toulene ABC transporter, permease protein [Brucella abortus bv. 1 str. 9-941] gi|82615971|emb|CAJ10994.1| Sulfate transporter/antisigma-factor antagonist STAS:Protein of unknown function DUF140 [Brucella melitensis biovar Abortus 2308] gi|237790280|gb|EEP64490.1| toulene ABC transporter, permease protein [Brucella abortus str. 2308 A] gi|255999603|gb|ACU48002.1| toluene ABC transporter, permease protein, putative [Brucella microti CCM 4915] gi|260096716|gb|EEW80591.1| sulfate transporter/antisigma-factor [Brucella abortus NCTC 8038] gi|260668296|gb|EEX55236.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260672233|gb|EEX59054.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260873303|gb|EEX80372.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|260920772|gb|EEX87425.1| conserved hypothetical protein [Brucella ceti B1/94] gi|261303280|gb|EEY06777.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|262552620|gb|EEZ08610.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|264660885|gb|EEZ31146.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] gi|297175512|gb|EFH34859.1| ABC transport system permease [Brucella abortus bv. 5 str. B3196] Length = 391 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 159/373 (42%), Positives = 230/373 (61%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 23 EQDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81 Query: 62 MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ K ++L+GV L + + + + + FF+ +F N+ +G + Sbjct: 82 RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ND HILG I G + +++ QM +GV +P+V+L+S + Sbjct: 139 ISMFNDFKMAMHILGATIR--GAQLKYGRGNGIPIAAIVTQMDRMGVGAIPIVVLMSTIV 196 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 377 VVDGLFAMFYAAI 389 >gi|225852524|ref|YP_002732757.1| hypothetical protein BMEA_A1060 [Brucella melitensis ATCC 23457] gi|256044678|ref|ZP_05447582.1| hypothetical protein Bmelb1R_09298 [Brucella melitensis bv. 1 str. Rev.1] gi|256113572|ref|ZP_05454392.1| hypothetical protein Bmelb3E_12477 [Brucella melitensis bv. 3 str. Ether] gi|256263986|ref|ZP_05466518.1| sulfate transporter/antisigma-factor [Brucella melitensis bv. 2 str. 63/9] gi|260564024|ref|ZP_05834510.1| sulfate transporter/antisigma-factor [Brucella melitensis bv. 1 str. 16M] gi|265991102|ref|ZP_06103659.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] gi|265994939|ref|ZP_06107496.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|225640889|gb|ACO00803.1| protein of unknown function DUF140 [Brucella melitensis ATCC 23457] gi|260154040|gb|EEW89132.1| sulfate transporter/antisigma-factor [Brucella melitensis bv. 1 str. 16M] gi|262766052|gb|EEZ11841.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|263001886|gb|EEZ14461.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] gi|263094130|gb|EEZ18052.1| sulfate transporter/antisigma-factor [Brucella melitensis bv. 2 str. 63/9] gi|326409040|gb|ADZ66105.1| conserved hypothetical protein [Brucella melitensis M28] gi|326538749|gb|ADZ86964.1| conserved hypothetical protein [Brucella melitensis M5-90] Length = 391 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 159/373 (42%), Positives = 229/373 (61%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G+ V +G W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 23 EQDGMRVIHLSGPWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81 Query: 62 MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ K ++L+GV L + + + + + FF+ +F N+ +G + Sbjct: 82 RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ND HILG I G + +++ QM +GV +P+V+L+S + Sbjct: 139 ISMFNDFKMAMHILGATIR--GAQLKYGRGNGIPIAAIVTQMDRMGVGAIPIVVLMSTIV 196 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 377 VVDGLFAMFYAAI 389 >gi|294852390|ref|ZP_06793063.1| ABC transport system permease [Brucella sp. NVSL 07-0026] gi|294820979|gb|EFG37978.1| ABC transport system permease [Brucella sp. NVSL 07-0026] Length = 391 Score = 299 bits (767), Expect = 4e-79, Method: Composition-based stats. Identities = 158/373 (42%), Positives = 230/373 (61%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 23 EQDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81 Query: 62 MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ K ++L+GV L + + + + + FF+ +F N+ +G + Sbjct: 82 RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ND HILG I G + +++ QM +GV +P+++L+S + Sbjct: 139 ISMFNDFKMAMHILGATIR--GAQLKYGRGNGIPIAAIVTQMDRMGVGAIPIIVLMSTIV 196 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 377 VVDGLFAMFYAAI 389 >gi|218886600|ref|YP_002435921.1| hypothetical protein DvMF_1505 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757554|gb|ACL08453.1| protein of unknown function DUF140 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 430 Score = 299 bits (767), Expect = 4e-79, Method: Composition-based stats. Identities = 124/374 (33%), Positives = 204/374 (54%), Gaps = 11/374 (2%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINK-----SIQSDSAIV--DLSAITEIDTIGAELIM 59 V F+G W I + ++ + S+Q D+ +V DL+ +T +DT GA+L+ Sbjct: 61 LVLTFSGVWDVASIGRMTARLLRRCAEVGNACSVQGDAPVVHLDLAEVTRLDTAGAQLLC 120 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 V H+ + + I R+ + IG IV Sbjct: 121 RAA--ASMATAGARVVWHVSDHGQSMLLDRVRAIDISAVPRARRISPVVGALNAIGGSIV 178 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + + + + LG+ + + A ++ + +S++ M G+ VP+V L++F+ G Sbjct: 179 EELEQARAIIGFLGMFLVSLAAAVARPWRLR--WVSIVHHMEQTGIQAVPIVALLTFLIG 236 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V A G+ Q ++FGA++F ++L+ + LRE+GVLLTA+++AGRSGS+ A+IG+M NE Sbjct: 237 LVTAYMGSEQFTRFGAQVFVVNLIEVSTLRELGVLLTALIVAGRSGSSFTAQIGAMVANE 296 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DA+R+MGLD + +L+ PR+ AL++ LP+LT +A+F ++G I W I F Sbjct: 297 EVDAMRSMGLDPMEVLVIPRVVALVLMLPVLTFIADFMGVLGGGIASWLSLGISPGAFAV 356 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 RF LAN TGL+KAPF A IGIV +GF V + S+G+ T VV+SI +VI+ Sbjct: 357 RFQEITRLANFVTGLVKAPFFALIIGIVGCFQGFRVTGSAESVGRLTTQAVVESIFLVIV 416 Query: 360 IDSLFAIFYFAIGI 373 ++ FAI + ++G+ Sbjct: 417 ANAGFAILFMSLGV 430 >gi|187927276|ref|YP_001897763.1| hypothetical protein Rpic_0168 [Ralstonia pickettii 12J] gi|309780024|ref|ZP_07674777.1| competence protein ComM [Ralstonia sp. 5_7_47FAA] gi|187724166|gb|ACD25331.1| protein of unknown function DUF140 [Ralstonia pickettii 12J] gi|308921194|gb|EFP66838.1| competence protein ComM [Ralstonia sp. 5_7_47FAA] Length = 374 Score = 299 bits (767), Expect = 4e-79, Method: Composition-based stats. Identities = 101/371 (27%), Positives = 187/371 (50%), Gaps = 12/371 (3%) Query: 4 NGITVFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +G +V +G+W + ++E A ++ ++ L+ + ID GA+L+ Sbjct: 15 DGRSVAFLSGDWTTLALAERAGVRSARQQIRAGLDNANAWCLTEVGRIDHFGAQLLW--- 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + G + + +Q ++ + K + + N L G+ ++ F Sbjct: 72 -RAWGNQWPEHLDARPDQ-RRMLDRVAKLDPGGWKQRLAPRMNPVAIL----GEGMLDFF 125 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + + + ++G ++ + G F + + +G + +Y G + + L+ F+ G V+ Sbjct: 126 DHAGNGIAMVGQLVFDLGRFVRAPH--RGPWREISANIYSTGYKALGITALVGFLIGIVL 183 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + A QL FGA IF ++++ + +RE+G +L A+++AGRSGSAI A+IG M++ EE+D Sbjct: 184 SYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELD 243 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R MG+ LI P++ AL I++PLL + A+ G + DI F + Sbjct: 244 AMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITSLP 303 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 +AN++ G+ K I +VA G + ++ SLG+ TT VV SI+IVI+ D+ Sbjct: 304 DAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIVILADA 363 Query: 363 LFAIFYFAIGI 373 +FAI + +GI Sbjct: 364 VFAILFKDVGI 374 >gi|163843287|ref|YP_001627691.1| hypothetical protein BSUIS_A1062 [Brucella suis ATCC 23445] gi|163674010|gb|ABY38121.1| protein of unknown function DUF140 [Brucella suis ATCC 23445] Length = 391 Score = 299 bits (767), Expect = 4e-79, Method: Composition-based stats. Identities = 158/373 (42%), Positives = 229/373 (61%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 23 EQDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81 Query: 62 MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ K ++L+GV L + + + + + FF+ +F N+ +G + Sbjct: 82 RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ND HILG I G + +++ QM +GV +P+V+L+S + Sbjct: 139 ISMFNDFKMAMHILGATIR--GAQLKYGRGNGIPIAAIVTQMDRMGVGAIPIVVLMSTIV 196 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY I Sbjct: 377 VVDGLFAMFYATI 389 >gi|161618971|ref|YP_001592858.1| hypothetical protein BCAN_A1034 [Brucella canis ATCC 23365] gi|254704312|ref|ZP_05166140.1| hypothetical protein Bsuib36_10354 [Brucella suis bv. 3 str. 686] gi|260566441|ref|ZP_05836911.1| sulfate transporter/antisigma-factor [Brucella suis bv. 4 str. 40] gi|261754981|ref|ZP_05998690.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] gi|161335782|gb|ABX62087.1| protein of unknown function DUF140 [Brucella canis ATCC 23365] gi|260155959|gb|EEW91039.1| sulfate transporter/antisigma-factor [Brucella suis bv. 4 str. 40] gi|261744734|gb|EEY32660.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] Length = 391 Score = 299 bits (767), Expect = 4e-79, Method: Composition-based stats. Identities = 158/373 (42%), Positives = 229/373 (61%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 23 EQDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81 Query: 62 MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ K ++L+GV L + + + + + FF+ +F N+ +G + Sbjct: 82 RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ND HILG I G + +++ QM +GV +P+V+L+S + Sbjct: 139 ISMFNDFKMAMHILGATIR--GAQLKYGRGNGIPIAAIVTQMDRMGVGAIPIVVLMSTIV 196 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 S H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 317 SHLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 377 VVDGLFAMFYAAI 389 >gi|70733612|ref|YP_257252.1| ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68347911|gb|AAY95517.1| ABC transporter, permease protein, putative [Pseudomonas fluorescens Pf-5] Length = 382 Score = 299 bits (766), Expect = 4e-79, Method: Composition-based stats. Identities = 123/366 (33%), Positives = 198/366 (54%), Gaps = 7/366 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM--EKYH 66 R G+W S++ + +++ S S +DL+ + +DT GA L++ + E+ Sbjct: 21 LRIGGDWTLAHYSDLKR-LSQSLDGRYDS-STHIDLNGLGALDTAGASLLVELLGAERLG 78 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 + + +L+ + P + + L IG + D+ Sbjct: 79 QSAEHPDCTLSAAD-RALLHTVYTSLNDFCVPVKEPEISVSVQLLSRIGSAVYTVWQDTL 137 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 +GL++ +++ + ++ + G+ P+V L++F+ GAV+A G Sbjct: 138 KVLGFIGLILETLARGLLRPKRWR--ITPVVAHIEQTGLDAAPIVALLTFLVGAVVAFLG 195 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A L+ FGA IF++DL++ LRE GVLLTA+++AGR+ SA A+IGSMK NEEIDAIRT Sbjct: 196 ATVLANFGASIFTVDLVAFSFLREFGVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRT 255 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +GLD V +L+ PR+ AL++SLP+LT LA S I+G ++V DI A+F S HS Sbjct: 256 LGLDPVELLVLPRVLALLVSLPMLTFLAMLSGIVGGAVVCALSLDISPAMFLSLLHSDIG 315 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + + GL+KAP A I + EGF V + S+G T+ VVQSI +VI+ID++ A+ Sbjct: 316 VKHFLLGLVKAPIFAFLIAAIGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVIDAVAAL 375 Query: 367 FYFAIG 372 F+ +G Sbjct: 376 FFMEMG 381 >gi|332187454|ref|ZP_08389192.1| hypothetical protein SUS17_2546 [Sphingomonas sp. S17] gi|332012615|gb|EGI54682.1| hypothetical protein SUS17_2546 [Sphingomonas sp. S17] Length = 368 Score = 299 bits (766), Expect = 4e-79, Method: Composition-based stats. Identities = 112/364 (30%), Positives = 188/364 (51%), Gaps = 14/364 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 RF GN + ++ + + ++ +DLS + IDT+GA L+ F + Sbjct: 17 LRFTGNLSLATLGDLPERLDRE-----EASVQRIDLSQVDRIDTVGAWLVHRFAARNDAA 71 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 I+ G+ + L + + +P + F + +G ++ Sbjct: 72 IE--GLDENQRNLVDKVVEADQPVAMRPQP-----ISPFARVAGEVGDAVITAFKTLYGL 124 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G + +F+ +++ + VGVS + ++ L+SF+ G VIAQQGA Sbjct: 125 LGFMGATVIAGFAVLRHPRRFR--FNAVVHEFETVGVSALAIIGLMSFLIGIVIAQQGAV 182 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 QL QFGAE+F+I+L+ L LRE+GVL+TA+M+AGRSGSA A++G+MK+ EEIDA+R +G Sbjct: 183 QLRQFGAEVFTINLVGRLTLRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEIDAMRVIG 242 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + + L+ PR A + +PLL ++ A+IG + IP F +R + Sbjct: 243 VSPMEALVLPRTIAAVTLMPLLGFYSSLIAMIGGCFLAAVSLGIPPVTFIARIREVVPIT 302 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 +++ GLIKAP I I +G V + +G + T VVQ+I +VI++D+ FA+F+ Sbjct: 303 DLYVGLIKAPVFGAIIAIAGCFQGMQVKSDAEQVGLRTTAAVVQAIFLVIVLDAFFAVFF 362 Query: 369 FAIG 372 +G Sbjct: 363 TWLG 366 >gi|84622391|ref|YP_449763.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188578633|ref|YP_001915562.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae PXO99A] gi|84366331|dbj|BAE67489.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188523085|gb|ACD61030.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae PXO99A] Length = 370 Score = 299 bits (766), Expect = 4e-79, Method: Composition-based stats. Identities = 120/364 (32%), Positives = 193/364 (53%), Gaps = 13/364 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R AG+W A+ + +++ +D I ++D+ G ++ F + K Sbjct: 19 LRLAGSWVLATALPQAE-----LLQTVPDGVRRIDARGIQQLDSAGVLQLLRFASRIGLK 73 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + +L+ + KP+R + F +G+ + D Sbjct: 74 EDAIDFRDEHQ---ALVCTIEELNDERPKPKRDY---GFVAALDRLGRATHRIGQDILEL 127 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + +F+ L S + M VG+ VP+V+L+S++ GAVIA G+ Sbjct: 128 NSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFLGST 185 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAIRT+G Sbjct: 186 ILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIRTLG 245 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD + +L+ PR+ ALI +LPLLT +A + + G V DIP ++ +R H T L Sbjct: 246 LDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHETIQLR 305 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ A+++ Sbjct: 306 HFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWF 365 Query: 369 FAIG 372 +G Sbjct: 366 MKMG 369 >gi|225627497|ref|ZP_03785534.1| toulene ABC transporter permease protein [Brucella ceti str. Cudo] gi|260168729|ref|ZP_05755540.1| Sulfate transporter/antisigma-factor [Brucella sp. F5/99] gi|261758207|ref|ZP_06001916.1| sulfate transporter/antisigma-factor [Brucella sp. F5/99] gi|225617502|gb|EEH14547.1| toulene ABC transporter permease protein [Brucella ceti str. Cudo] gi|261738191|gb|EEY26187.1| sulfate transporter/antisigma-factor [Brucella sp. F5/99] Length = 391 Score = 299 bits (766), Expect = 5e-79, Method: Composition-based stats. Identities = 159/373 (42%), Positives = 229/373 (61%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 23 EQDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81 Query: 62 MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ K ++L+GV L + + + + + FF+ +F N+ +G + Sbjct: 82 RQRLAAKYVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ND HILG I G + +++ QM GV +P+V+L+S + Sbjct: 139 ISMFNDFKMAMHILGATIR--GAQLKYGRGNGIPIAAIVTQMDRTGVGAIPIVVLMSTIV 196 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 377 VVDGLFAMFYAAI 389 >gi|254714105|ref|ZP_05175916.1| Sulfate transporter/antisigma-factor [Brucella ceti M644/93/1] gi|254716838|ref|ZP_05178649.1| Sulfate transporter/antisigma-factor [Brucella ceti M13/05/1] gi|261218640|ref|ZP_05932921.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261321862|ref|ZP_05961059.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|260923729|gb|EEX90297.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261294552|gb|EEX98048.1| conserved hypothetical protein [Brucella ceti M644/93/1] Length = 391 Score = 299 bits (766), Expect = 5e-79, Method: Composition-based stats. Identities = 159/373 (42%), Positives = 229/373 (61%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++GI V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 23 EQDGIRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81 Query: 62 MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ K ++L+GV L + + + + + FF+ +F N+ +G + Sbjct: 82 RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ND HILG I G + +++ QM +GV +P+V+L+S + Sbjct: 139 ISMFNDFKMAMHILGATIR--GAQLKYGRGNGIPIAAIVTQMDRMGVGAIPIVVLMSTIV 196 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAEIF +DL+ IL LRE+G LLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGGLLTAIMIAGRSGSAITAEIGSMKMR 256 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 377 VVDGLFAMFYAAI 389 >gi|254689249|ref|ZP_05152503.1| Sulfate transporter/antisigma-factor [Brucella abortus bv. 6 str. 870] gi|260754755|ref|ZP_05867103.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260674863|gb|EEX61684.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] Length = 391 Score = 299 bits (766), Expect = 5e-79, Method: Composition-based stats. Identities = 159/373 (42%), Positives = 230/373 (61%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 23 EQDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81 Query: 62 MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ K ++L+GV L + + + + + FF+ +F N+ +G + Sbjct: 82 RQRLAAKYVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ND HILG I G + +++ QM +GV +P+V+L+S + Sbjct: 139 ISMFNDFKMAMHILGATIR--GAQLKYGRGNGIPIAAIVTQMDRMGVGAIPIVVLMSTIV 196 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 377 VVDGLFAMFYAAI 389 >gi|330806719|ref|YP_004351181.1| Putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327374827|gb|AEA66177.1| Putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 382 Score = 299 bits (766), Expect = 5e-79, Method: Composition-based stats. Identities = 116/361 (32%), Positives = 194/361 (53%), Gaps = 7/361 (1%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM--EKYHGKIK 70 G+W +++ + ++ ++ +DL+ + +DT GA L++ + E+ + Sbjct: 25 GDWTLAHYAQLKR-LSESLRGQYDENTL-IDLNGLGALDTAGASLLVELLGSERLGKTTE 82 Query: 71 LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAH 130 S + +L+ + P + L IG+ + K D+ Sbjct: 83 HPDCSLPAAE-RALLQTVYCSLTDFCVPVKEPQVGVLTQLLTRIGRAVEKVWQDTLQLLG 141 Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190 +GL++ +++ + ++ + G+ P+V L++F+ GAV+A GA L Sbjct: 142 FVGLILETLARNLLRPRRWR--MTPMVVHIEQTGLDAAPIVALLTFLVGAVVAFLGATVL 199 Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 + FGA IF++DL++ LRE GVLLTA+++AGR+ SA A+IGSMK NEEIDAIRT+GLD Sbjct: 200 ADFGASIFTVDLVAFSFLREFGVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRTLGLD 259 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 V +L+ PR+ AL+++LP+LT LA S IIG +V I A+F + S + + Sbjct: 260 PVELLVIPRVLALLVALPMLTFLAMLSGIIGGGVVCALSLGISPAMFLTLLQSDIGVQHF 319 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G++KAP A I V EGF V + S+G T+ VVQSI +VI++D++ A+F+ Sbjct: 320 LVGMVKAPIFAFLIAAVGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVLDAVAALFFME 379 Query: 371 I 371 + Sbjct: 380 M 380 >gi|256061111|ref|ZP_05451265.1| hypothetical protein Bneo5_12197 [Brucella neotomae 5K33] gi|261325112|ref|ZP_05964309.1| conserved hypothetical protein [Brucella neotomae 5K33] gi|261301092|gb|EEY04589.1| conserved hypothetical protein [Brucella neotomae 5K33] Length = 391 Score = 299 bits (766), Expect = 5e-79, Method: Composition-based stats. Identities = 158/373 (42%), Positives = 229/373 (61%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 23 EQDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81 Query: 62 MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ K ++L+GV L + + + + + FF+ +F N+ +G + Sbjct: 82 RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ND HILG I G + +++ QM +GV +P+V+L+S + Sbjct: 139 ISMFNDFKMAMHILGATIR--GAQLKYGRGNGIPIAAIVTQMDRMGVGAIPIVVLMSTIV 196 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL++ LP LTIL++ SA++GA+ V W Y +I F Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPPLTILSDLSALVGAAGVSWLYSNISPEAFI 316 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 377 VVDGLFAMFYAAI 389 >gi|254693733|ref|ZP_05155561.1| hypothetical protein Babob3T_03544 [Brucella abortus bv. 3 str. Tulya] gi|261214007|ref|ZP_05928288.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] gi|260915614|gb|EEX82475.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] Length = 391 Score = 299 bits (766), Expect = 5e-79, Method: Composition-based stats. Identities = 159/373 (42%), Positives = 230/373 (61%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 23 EQDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81 Query: 62 MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ K ++L+GV L + + + + + FF+ +F N+ +G + Sbjct: 82 RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ND HILG I G + +++ QM +GV +P+V+L+S + Sbjct: 139 ISMFNDFKMAMHILGATIR--GAQLKYGRGNGIPIAAIVTQMDRMGVGAIPIVVLMSTIV 196 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F Sbjct: 257 EETDALTVIGLNPVGVLVFPRLAALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 377 VVDGLFAMFYAAI 389 >gi|116690919|ref|YP_836542.1| hypothetical protein Bcen2424_2901 [Burkholderia cenocepacia HI2424] gi|116649008|gb|ABK09649.1| protein of unknown function DUF140 [Burkholderia cenocepacia HI2424] Length = 447 Score = 299 bits (766), Expect = 5e-79, Method: Composition-based stats. Identities = 102/366 (27%), Positives = 173/366 (47%), Gaps = 11/366 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R G W + ++ V I + DLS I +D +G + + + G Sbjct: 92 TVRLTGQWTALSLARNRGAVARRIASIAAGRVSEWDLSGIERLDHVGGQALW----RVWG 147 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + GV+ Q ++ R + + P+R ++ L G I F Sbjct: 148 RKLPAGVALSATQ-RTIFERIERLDSEREAPERIVRFDPVTRL----GLAIFAFGEHLQG 202 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + G VI + +Y G +P+ L++F+ G V++ A Sbjct: 203 GITMFGRVILDALSVLRRPKTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 260 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M Sbjct: 261 QQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 320 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ LI PR+ AL +++PLL + N A+ G ++ I F + Sbjct: 321 GIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKLVLGIDINYFVRSLPGVVPI 380 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN++ G+ K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI Sbjct: 381 ANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIL 440 Query: 368 YFAIGI 373 + +G+ Sbjct: 441 FQNVGL 446 >gi|170724242|ref|YP_001751930.1| hypothetical protein PputW619_5085 [Pseudomonas putida W619] gi|169762245|gb|ACA75561.1| protein of unknown function DUF140 [Pseudomonas putida W619] Length = 377 Score = 299 bits (765), Expect = 5e-79, Method: Composition-based stats. Identities = 121/365 (33%), Positives = 193/365 (52%), Gaps = 9/365 (2%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH-G 67 R AG+W + + D ++ A+ DLS + ++DT GA L+ + Sbjct: 20 LRIAGDWTLAHYASLKRDSERL--RTQYDADAVADLSQLGQLDTAGASLLAELLGSERLS 77 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + L ++ I ++P+R L IG+ + D+ Sbjct: 78 HCTQELPDASRALLKNVYCSVQDYCIPVKEPERHV----LILLLERIGRAVNTLWQDTLQ 133 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +GL++ ++++ L ++ + G+ P+V L++F+ GAV+A GA Sbjct: 134 LLGFIGLILETLLRRALQPHRWR--LTPVVSHIEQTGLDAAPIVALLTFLVGAVVAFLGA 191 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L+ FGA +F++DL++ LRE VLLTA+++AGR+ SA A+IGSMK NEEIDAIRT+ Sbjct: 192 TVLADFGATVFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRTL 251 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GL+ + +L+ PR+ AL+ISLPLLT +A I+G ++V DI A+F S S + Sbjct: 252 GLNPIELLVVPRVLALLISLPLLTFVAMICGIVGGAVVCALSLDISPAMFLSLLQSDIGV 311 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + GL KAPF A I + EGF V + S+G T+ VVQSI +VI++D++ A+F Sbjct: 312 QHFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVLDAVAALF 371 Query: 368 YFAIG 372 +G Sbjct: 372 CMEMG 376 >gi|239831972|ref|ZP_04680301.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] gi|239824239|gb|EEQ95807.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] Length = 391 Score = 299 bits (765), Expect = 6e-79, Method: Composition-based stats. Identities = 157/373 (42%), Positives = 224/373 (60%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +G+ R G W S + + DD V + + + ++ I+D+S ++ +DT GA LI Sbjct: 23 EHDGVRHIRMNGRWVSQSV-NLVDDKVRRLENADKREATIIDISGVSGLDTAGAWLIERL 81 Query: 62 MEKYHG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ +++L+GV L + + + + ++ FF SF +G + Sbjct: 82 RQRLVAQQVEVQLEGVRQSWLPLMEEVGQAVERTLDIPRQKKPFFLISF---LAALGGGV 138 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 V +D HILG I G +++ QM +GV +P++IL+S + Sbjct: 139 VSLGSDFKMAMHILGATIR--GAQLKYGRGSGIPFAAIVTQMDRMGVGAIPIIILMSTIV 196 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL+I LPLLTI+++ +A+IGA V W Y +I F Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVIVLPLLTIVSDLAALIGAGGVAWFYSNISPDAFI 316 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 377 VVDGLFAMFYAAI 389 >gi|167031179|ref|YP_001666410.1| hypothetical protein PputGB1_0158 [Pseudomonas putida GB-1] gi|166857667|gb|ABY96074.1| protein of unknown function DUF140 [Pseudomonas putida GB-1] Length = 377 Score = 299 bits (765), Expect = 6e-79, Method: Composition-based stats. Identities = 120/365 (32%), Positives = 193/365 (52%), Gaps = 9/365 (2%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G+W + + + ++ + + DLS + +DT GA L+ + Sbjct: 20 LRITGDWTLAHYANLKRESEQL--RTQYAADTVADLSQLGRLDTAGASLLAELLGSERLS 77 Query: 69 IKLQGVSTHIEQLF-SLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 Q + L ++ I ++P+R N L IG+ + DS Sbjct: 78 RCTQDLPEASRALLKNVYCSVQDYCIPVKEPER----NVLLMLLERIGRAVGTLWQDSMQ 133 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +G+++ ++++ ++ + G+ P+V L++F+ GAV+A GA Sbjct: 134 LLGFVGVILETLLRRALQPHRWR--FTPVVAHIEQTGLDAAPIVALLTFLVGAVVAFLGA 191 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L+ FGA IF++DL++ LRE VLLTA+++AGR+ SA A+IGSMK NEEIDAIRT+ Sbjct: 192 TVLADFGATIFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRTL 251 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GL+ + +L+ PR+ AL+ISLPLLT +A +IG ++V DI A+F S S + Sbjct: 252 GLNPMELLVVPRVLALLISLPLLTFVAMICGMIGGAVVCALTLDISPAMFLSLLQSDIGV 311 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + GL KAPF A I + EGF V + S+G T+ VVQSI +VI++D++ A+F Sbjct: 312 QHFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVIVLDAVAALF 371 Query: 368 YFAIG 372 + +G Sbjct: 372 FMEMG 376 >gi|296284592|ref|ZP_06862590.1| putative ABC transport system permease protein [Citromicrobium bathyomarinum JL354] Length = 370 Score = 299 bits (765), Expect = 6e-79, Method: Composition-based stats. Identities = 117/371 (31%), Positives = 191/371 (51%), Gaps = 14/371 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + G TV R G + I+ + + + D A ++EIDT+GA Sbjct: 12 GDGGRTVLRLKGPYLLSTIANVDRGLRKLDDDIDVIDLA-----EVSEIDTVGAWFACTL 66 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + I+ S ++L + + + N + +G+K+ + Sbjct: 67 ARNHSASIE--NASERADRLLTAVGES-----ANSSDVSAPRLPLLTRAPEAMGEKVFEA 119 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 S G +++ +F+ +++ Q VGV+ +P++ L+SF+ G V Sbjct: 120 GRGIVSVVGFFGQILAGAASLIRHPRRFRH--RAMVHQFESVGVNALPIIGLMSFLIGIV 177 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IAQQGA QL FGAE +++L+ + LRE+GVL+TA+M+AGRSGSA A+IG+MK+ EEI Sbjct: 178 IAQQGAVQLQAFGAEALTVNLVGRITLRELGVLMTAIMVAGRSGSAFAAQIGTMKLTEEI 237 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+RT+G+ V +L+ PR+ A + + LL A+ AIIG ++V IPF F R Sbjct: 238 DAMRTIGISPVEVLVIPRLVACVFMMILLGFYASCMAIIGGAVVSDVMLGIPFWTFLMRI 297 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 H +++ G+IKAP +G+ +G V +S +G + T VVQ+I VI++D Sbjct: 298 HEVVPAHDVWVGMIKAPVFGLIVGMSGCYQGMQVRGNSEEVGLRTTKAVVQAIFTVIVLD 357 Query: 362 SLFAIFYFAIG 372 + FA+F+ IG Sbjct: 358 AFFAVFFTGIG 368 >gi|148555653|ref|YP_001263235.1| hypothetical protein Swit_2742 [Sphingomonas wittichii RW1] gi|148500843|gb|ABQ69097.1| protein of unknown function DUF140 [Sphingomonas wittichii RW1] Length = 365 Score = 299 bits (765), Expect = 6e-79, Method: Composition-based stats. Identities = 116/365 (31%), Positives = 190/365 (52%), Gaps = 14/365 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 V F G I +++ + +++ +DL + IDT+GA L+ ++ Sbjct: 13 VLHFTGALTLARIGDLSRRL-----EALDEVPRTIDLGEVDRIDTVGAWLVHRIAREH-- 65 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 +++ G + QL I+ + R F + IG + Sbjct: 66 DVEIVGADADVCQLIEQIAEADK-----PLKIRPDSSPPFFRVLREIGDATSAAAHSLAG 120 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 G + +F+ ++ RQ VGV + ++ L+SF+ G VIAQQGA Sbjct: 121 LIGFFGATLIGLWGLVTHPRRFR--YNAMARQFEVVGVKALAIIGLMSFLIGIVIAQQGA 178 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL QFGAE+F+++L+ + LRE+GVL+TA+M+AGRSGSA A++GSMK+ EE+DA+RT+ Sbjct: 179 VQLRQFGAEVFAVNLIGRITLRELGVLMTAIMVAGRSGSAFAAQLGSMKLAEEVDAMRTI 238 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ + LI PR+ + ++ +PLL A AIIG I W DIP + R + Sbjct: 239 GVSPMEALILPRVLSTVVLMPLLGFYAAVIAIIGGGIFCWIDLDIPPITYVQRIREVVPM 298 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 +++ GLIKAP I + +G V ++ +G + T VVQ+I +VI++D++FA+F Sbjct: 299 TDLWVGLIKAPVFGMLIALCGCYQGMQVEGNAEEVGLRTTASVVQAIFLVIVLDAVFAVF 358 Query: 368 YFAIG 372 + +IG Sbjct: 359 FSSIG 363 >gi|21244295|ref|NP_643877.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str. 306] gi|21109945|gb|AAM38413.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str. 306] Length = 370 Score = 299 bits (765), Expect = 6e-79, Method: Composition-based stats. Identities = 120/364 (32%), Positives = 193/364 (53%), Gaps = 13/364 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R AG+W A+ + +++ +D I ++D+ G ++ F + K Sbjct: 19 VRLAGSWVLATALPQAE-----LLQAVPDGVRRIDARGIQQLDSAGVLQLLRFAGRMGLK 73 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + +L+ + KP+R + F +G+ + D Sbjct: 74 EDAIDFRDEHQ---ALVCTIEELNDERPKPKRDY---GFVAALDRLGRATHRVGQDILEL 127 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + +F+ L S + M VG+ VP+V+L+S++ GAVIA G+ Sbjct: 128 NSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFLGST 185 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAIRT+G Sbjct: 186 ILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIRTLG 245 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD + +L+ PR+ ALI +LPLLT +A + + G V DIP ++ +R H T L Sbjct: 246 LDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDTIQLR 305 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ A+++ Sbjct: 306 HFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWF 365 Query: 369 FAIG 372 +G Sbjct: 366 MKMG 369 >gi|325928564|ref|ZP_08189752.1| putative integral membrane protein [Xanthomonas perforans 91-118] gi|325541103|gb|EGD12657.1| putative integral membrane protein [Xanthomonas perforans 91-118] Length = 370 Score = 299 bits (765), Expect = 7e-79, Method: Composition-based stats. Identities = 120/364 (32%), Positives = 193/364 (53%), Gaps = 13/364 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R AG+W A+ + +++ +D I ++D+ G ++ F + K Sbjct: 19 VRLAGSWVLATALPQAE-----LLQAVPDGVRRIDARGIQQLDSAGVLQLLRFAGRMGLK 73 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + +L+ + KP+R + F +G+ + D Sbjct: 74 EDAIDFRDEHQ---ALVCTIEELNDERPKPKRDY---GFVAALDRLGRATHRVGQDILEL 127 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + +F+ L S + M VG+ VP+V+L+S++ GAVIA G+ Sbjct: 128 NSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFLGST 185 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAIRT+G Sbjct: 186 ILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIRTLG 245 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD + +L+ PR+ ALI +LPLLT +A + + G V DIP ++ +R H T L Sbjct: 246 LDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHETIQLR 305 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ A+++ Sbjct: 306 HFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWF 365 Query: 369 FAIG 372 +G Sbjct: 366 MKMG 369 >gi|241761770|ref|ZP_04759856.1| protein of unknown function DUF140 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373684|gb|EER63244.1| protein of unknown function DUF140 [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 366 Score = 299 bits (765), Expect = 7e-79, Method: Composition-based stats. Identities = 122/364 (33%), Positives = 188/364 (51%), Gaps = 15/364 (4%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 G + +++ + + SD ++DLS + +DT GA L+ + + + Sbjct: 16 LALQGVLTLAHLDSLSNTL------QMLSDVKVIDLSNLHRMDTAGAWLVHKLAQDNNAE 69 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 +K G ++ + + IS R K + +GK V Sbjct: 70 VK--GTNSAVAHILDQISHYDRPLPPEPKA-----VSPLIYTLTGVGKNTVHVWYTIVGL 122 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 + G ++ + + + L ++I QM VGV+ + +V L+S + G VIAQQGA Sbjct: 123 VNFFGALLVSIWHTICHPSRLR--LTAIICQMETVGVNALAIVGLMSILVGVVIAQQGAV 180 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 QL QFGAEI+SI+L+ L RE+GVL+TA+M+AGRSGSA A+IGSM + EEIDA+R +G Sbjct: 181 QLRQFGAEIYSINLVGRLSFRELGVLMTAIMVAGRSGSAFAAQIGSMNLAEEIDAMRIIG 240 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + + L+ PR A II +PLL A +A+IG ++ W DIP FF+R Sbjct: 241 VSPMESLVLPRFLASIIMMPLLGFYATIAAVIGGGLLCWTVLDIPPTTFFTRLREVIPYT 300 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 ++ GL+KAP I I +G V ++ LG T VV SI +VI++D+ FA+F+ Sbjct: 301 DVAVGLVKAPIFGALIAIAGCFQGTQVKGNAEQLGYCTTKAVVHSIFLVIVLDAFFAVFF 360 Query: 369 FAIG 372 IG Sbjct: 361 SEIG 364 >gi|294624127|ref|ZP_06702865.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294663966|ref|ZP_06729386.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292601572|gb|EFF45571.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292606261|gb|EFF49492.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 370 Score = 298 bits (764), Expect = 7e-79, Method: Composition-based stats. Identities = 120/364 (32%), Positives = 196/364 (53%), Gaps = 13/364 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R AG+W A +++ A+ + ++ +D I ++D+ G ++ F + K Sbjct: 19 VRLAGSWVLATALPQA-ELLQAVPEGVRR----IDARGIQQLDSAGVLQLLRFAGRMGLK 73 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + +L+ + KP+R + F +G+ + D Sbjct: 74 EDAIDFRDEHQ---ALVCTIEELNDERPKPKRDY---GFVAALDRLGRATHRVGQDILEL 127 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + +F+ L S + M VG+ VP+V+L+S++ GAVIA G+ Sbjct: 128 NSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFLGST 185 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAIRT+G Sbjct: 186 ILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIRTLG 245 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD + +L+ PR+ AL+ +LPLLT +A + + G V DIP ++ +R H T L Sbjct: 246 LDPIDLLVIPRLLALVFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDTIQLR 305 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ A+++ Sbjct: 306 HFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWF 365 Query: 369 FAIG 372 +G Sbjct: 366 MKMG 369 >gi|260752530|ref|YP_003225423.1| hypothetical protein Za10_0287 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283856391|ref|YP_162753.2| hypothetical protein ZMO1018 [Zymomonas mobilis subsp. mobilis ZM4] gi|258551893|gb|ACV74839.1| protein of unknown function DUF140 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283775390|gb|AAV89642.2| protein of unknown function DUF140 [Zymomonas mobilis subsp. mobilis ZM4] Length = 366 Score = 298 bits (764), Expect = 8e-79, Method: Composition-based stats. Identities = 122/364 (33%), Positives = 187/364 (51%), Gaps = 15/364 (4%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 G + +++ + SD ++DLS + +DT GA L+ + + + Sbjct: 16 LALQGVLTLAHLDSLSNTL------QTLSDVKVIDLSNLHRMDTAGAWLVHKLAQDNNAE 69 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 +K G ++ + + IS R K + +GK V Sbjct: 70 VK--GTNSAVAHILDQISHYDRPLPPEPKA-----VSPLIYTLTGVGKNTVHVWYTIVGL 122 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 + G ++ + + + L ++I QM VGV+ + +V L+S + G VIAQQGA Sbjct: 123 VNFFGALLVSIWHTICHPSRLR--LTAIICQMETVGVNALAIVGLMSILVGVVIAQQGAV 180 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 QL QFGAEI+SI+L+ L RE+GVL+TA+M+AGRSGSA A+IGSM + EEIDA+R +G Sbjct: 181 QLRQFGAEIYSINLVGRLSFRELGVLMTAIMVAGRSGSAFAAQIGSMNLAEEIDAMRIIG 240 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + + L+ PR A II +PLL A +A+IG ++ W DIP FF+R Sbjct: 241 VSPMESLVLPRFLASIIMMPLLGFYATIAAVIGGGLLCWTVLDIPPTTFFTRLREVIPYT 300 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 ++ GL+KAP I I +G V ++ LG T VV SI +VI++D+ FA+F+ Sbjct: 301 DVAVGLVKAPIFGALIAIAGCFQGTQVKGNAEQLGYCTTKAVVHSIFLVIVLDAFFAVFF 360 Query: 369 FAIG 372 IG Sbjct: 361 SEIG 364 >gi|254719095|ref|ZP_05180906.1| Sulfate transporter/antisigma-factor [Brucella sp. 83/13] gi|265984086|ref|ZP_06096821.1| conserved hypothetical protein [Brucella sp. 83/13] gi|306838379|ref|ZP_07471224.1| Sulfate transporter/antisigma-factor [Brucella sp. NF 2653] gi|264662678|gb|EEZ32939.1| conserved hypothetical protein [Brucella sp. 83/13] gi|306406519|gb|EFM62753.1| Sulfate transporter/antisigma-factor [Brucella sp. NF 2653] Length = 391 Score = 298 bits (764), Expect = 8e-79, Method: Composition-based stats. Identities = 158/373 (42%), Positives = 229/373 (61%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 23 EQDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81 Query: 62 MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ K ++L+GV L + + + + + FF+ +F N+ +G + Sbjct: 82 RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ND HILG I G + +++ QM +GV +P+V+L+S + Sbjct: 139 ISMFNDFKMAMHILGATIR--GAQLKYGRGNGIPIAAIVTQMDRMGVGAIPIVVLMSTIV 196 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FG EIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 197 GAIIAQQGAFQLRYFGTEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 377 VVDGLFAMFYAAI 389 >gi|26986887|ref|NP_742312.1| hypothetical protein PP_0142 [Pseudomonas putida KT2440] gi|24981490|gb|AAN65776.1|AE016203_9 ABC transporter, permease protein, putative [Pseudomonas putida KT2440] Length = 377 Score = 298 bits (763), Expect = 9e-79, Method: Composition-based stats. Identities = 120/365 (32%), Positives = 192/365 (52%), Gaps = 9/365 (2%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G+W + + + +S + DLS + +DT GA L+ + Sbjct: 20 LRITGDWTLAHYANLKRESERL--RSHCPADTVADLSQLGRLDTAGASLLAELLGSERLS 77 Query: 69 IKLQGVSTHIEQLF-SLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + + L ++ I ++P+R N L IG+ + DS Sbjct: 78 HCTHALPEASQALLKNVYCSVQDYCIPVKEPER----NVLLLLLERIGRAVGTLWQDSMQ 133 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +G+++ ++++ ++ + G+ P+V L++F+ GAV+A GA Sbjct: 134 LLGFVGVILETLLRRAFQPHRWR--FTPVVAHIEQTGLDAAPIVALLTFLVGAVVAFLGA 191 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L+ FGA IF++DL++ LRE VLLTA+++AGR+ SA A+IGSMK NEEIDAIRT+ Sbjct: 192 TVLADFGATIFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRTL 251 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GL+ + +L+ PR+ AL+ISLPLLT +A I+G ++V DI A+F S S + Sbjct: 252 GLNPMELLVVPRVLALLISLPLLTFVAMICGIVGGAVVCALTLDISPAMFLSLLQSDIGV 311 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + GL KAPF A I + EGF V + S+G T+ VVQSI +VI++D++ A+F Sbjct: 312 QHFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVIVLDAVAALF 371 Query: 368 YFAIG 372 + +G Sbjct: 372 FMEMG 376 >gi|90422963|ref|YP_531333.1| hypothetical protein RPC_1452 [Rhodopseudomonas palustris BisB18] gi|90104977|gb|ABD87014.1| protein of unknown function DUF140 [Rhodopseudomonas palustris BisB18] Length = 377 Score = 298 bits (763), Expect = 1e-78, Method: Composition-based stats. Identities = 129/376 (34%), Positives = 207/376 (55%), Gaps = 11/376 (2%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 ++ AG+W +P + V A S + +D+SA+ ++DT GA LI Sbjct: 10 IARGNGLALCAAGSWTAPFAPVLERIVAEAEALSGTRPNISIDVSAVAKLDTFGAWLIER 69 Query: 61 FMEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 + + G+S + L + +++K+ +P + S + +G+ Sbjct: 70 LRRSLTQGDAEATIAGLSANYSSLVDEV-----RRVKDPEPSKRGGI-SLRAPVERLGRS 123 Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + F++ + G V++ F+ L S + + V VP+V+LI+F+ Sbjct: 124 VAGFLDTIVGLVAMTGAVMAGMLRVVMHPGSFR--LTSTVHHLEQVCWRAVPIVMLITFL 181 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G ++AQQG F +FGA++F +D++ +L LRE+GVLL A+M+AGRSGSA AE+GSMK+ Sbjct: 182 IGCIVAQQGIFHFRKFGADVFVVDMLGVLVLRELGVLLVAIMVAGRSGSAYTAELGSMKM 241 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EEIDA+RTMG D + +LI PR+ AL++++P+LT L +A+ G +V W Y + F Sbjct: 242 REEIDALRTMGFDPIDVLIMPRMMALVLAMPILTFLGVVAALYGGGLVAWLYGGVDPDAF 301 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 R ++ + G+IKAP MA IGIVA EG AV + SLG+ T VV+ I V Sbjct: 302 LLRLRDAISIDHFTVGMIKAPVMAIVIGIVACVEGLAVAGSAESLGRHTTASVVKGIFFV 361 Query: 358 IIIDSLFAIFYFAIGI 373 I++D +FAIF+ +IG+ Sbjct: 362 IVMDGVFAIFFASIGM 377 >gi|118588764|ref|ZP_01546172.1| hypothetical protein SIAM614_18699 [Stappia aggregata IAM 12614] gi|118438750|gb|EAV45383.1| hypothetical protein SIAM614_18699 [Stappia aggregata IAM 12614] Length = 382 Score = 298 bits (763), Expect = 1e-78, Method: Composition-based stats. Identities = 138/368 (37%), Positives = 210/368 (57%), Gaps = 12/368 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY--- 65 +G+W I++ ++ + +D+S I +DT GA LI + Sbjct: 24 LALSGDWTVSTIADAERELNGLTLD--KKRLTCIDVSRIEHLDTSGAWLIHRTRGRLEFE 81 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 K+ L GVS + LF I H + KP F S G+++V +D+ Sbjct: 82 GRKVGLSGVSPVRKTLFEEIENHHP---PSWKPDPGGF--SIAGFLEATGRQMVDVYHDA 136 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + HILG + + + +S+ Q + VP+V L+SF+ GA+I+QQ Sbjct: 137 LAMLHILGSLGLVLSTVLLQPKRLRS--ISIAVQFDRSCIGAVPIVALMSFLIGAIISQQ 194 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 G F L QFGA+IF +DL IL LREIGV+LTA+M+AGRSGSA AE+G+M++ EE+DA+ Sbjct: 195 GGFYLRQFGADIFVVDLAGILVLREIGVILTAIMVAGRSGSAFTAELGAMRMQEEVDALH 254 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 +GL +L+ PRI AL+I+LP+LT +++ +A+ G+ +V W Y DIP A F ++ + Sbjct: 255 VIGLSVTEVLVLPRILALMIALPILTFISDLAALFGSGMVTWAYLDIPPAAFLTQLQAAI 314 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 T+ + GL+KAPFMA +G++A EG V S SLG+ T VV++I +VI++D FA Sbjct: 315 TINTLVVGLVKAPFMALIVGLIACVEGLKVEGSSESLGRHTTMSVVKAIFLVIVVDGFFA 374 Query: 366 IFYFAIGI 373 IF+ AIG+ Sbjct: 375 IFFAAIGV 382 >gi|254701770|ref|ZP_05163598.1| Sulfate transporter/antisigma-factor [Brucella suis bv. 5 str. 513] gi|261752323|ref|ZP_05996032.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] gi|261742076|gb|EEY30002.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] Length = 391 Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 158/373 (42%), Positives = 229/373 (61%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 23 EQDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81 Query: 62 MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ K ++L+GV L + + + + + FF+ +F N+ +G + Sbjct: 82 RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ND HILG I G + +++ QM +GV +P+V+L+S + Sbjct: 139 ISMFNDFKMAMHILGATIR--GAQLKYGRGNGIPIAAIVTQMDRMGVGAIPIVVLMSTIV 196 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V Y +I F Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSCLYSNISPEAFI 316 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 377 VVDGLFAMFYAAI 389 >gi|288962789|ref|YP_003453083.1| ABC transport system permease protein [Azospirillum sp. B510] gi|288915055|dbj|BAI76539.1| ABC transport system permease protein [Azospirillum sp. B510] Length = 401 Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 120/368 (32%), Positives = 196/368 (53%), Gaps = 10/368 (2%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 AG W E++ A D + + +DLS + +DT+GA L+ ++ Sbjct: 41 IAAAGRWTL-EVAAAASDALDHAAPPRDGAALRLDLSGVEALDTVGAYLLSRQADRMAAD 99 Query: 69 ---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 +++ GV LF + R K ++ ++ G+ V + Sbjct: 100 GRAVEVVGVRPEHAALFDAV----RDAGKAPPHPIEREHHPIHDMVVRTGETTVHAAREV 155 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 LGLV + + L S++ + G++ +P++ L+SF+ G V+A Q Sbjct: 156 LDLVGFLGLVTVTFVRLILRPSRLR--LTSVLFHIEQTGLNALPILGLLSFLIGVVLAFQ 213 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 GA QL +FGAE++ ++L+ I LREIG+L+TA+++AGRSGSA A+IG+MK+N+E+DAI Sbjct: 214 GADQLKRFGAELYVVNLLGISVLREIGILMTAIIVAGRSGSAFTAQIGTMKVNQEVDAIG 273 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 TMGLD V +L+ PR AL+I+LPLL A+ + G +++ + DI F F + HS Sbjct: 274 TMGLDPVELLVVPRALALVITLPLLAFYADVMGLFGGAVMAYATLDITFGQFIRQLHSAI 333 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + + GLIKAP A I +V EG V + S+G T VV+ I +VI+ID++F+ Sbjct: 334 GINTVLAGLIKAPVFALVIAMVGCYEGLKVSGSAESVGIMTTKAVVEGIFLVIVIDAVFS 393 Query: 366 IFYFAIGI 373 + + +G+ Sbjct: 394 VLFSLLGV 401 >gi|94496554|ref|ZP_01303130.1| hypothetical protein SKA58_17657 [Sphingomonas sp. SKA58] gi|94423914|gb|EAT08939.1| hypothetical protein SKA58_17657 [Sphingomonas sp. SKA58] Length = 369 Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 113/371 (30%), Positives = 192/371 (51%), Gaps = 14/371 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +G TV R +GN + ++ + ++Q VD+S + IDTIGA + Sbjct: 11 QRDGGTVIRLSGNLAIACLHDLPARLD-----AVQGPINAVDVSQVDHIDTIGAWTVHSA 65 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 ++ + I G + ++L + + R + + IG ++ Sbjct: 66 AKRLNAPI--TGANEDAQRLIEAVGT-----LDEPFSLRPDKVSPLTRVVGQIGDAVISA 118 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 G + +F+ + +++++ VGVS + ++ L+SF+ G V Sbjct: 119 GTTLMGLLGFFGASLVAAWGLIRHPSRFR--VNAVVQRFEVVGVSALGIIGLMSFLIGIV 176 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IAQQG+ QL QFG E+ +I+L+ L RE+GVL+TA+M+AGRSGSA A++G+MK+ EEI Sbjct: 177 IAQQGSVQLRQFGMEMLTINLVGRLTFRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEI 236 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+RT+G+ + L+ PR A+++ +PLL A+ A+IG + DIP F R Sbjct: 237 DAMRTIGVSPMEALVMPRTLAVVVMMPLLGFYASIVAVIGGGFLCAVALDIPPITFVQRL 296 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + +++ GLIKAP I + +G V ++ +G + T VVQ+I +VI+ID Sbjct: 297 REVVPITDLWVGLIKAPVFGIIIALSGCYQGMQVKANAEEVGLRTTAAVVQAIFLVIVID 356 Query: 362 SLFAIFYFAIG 372 + FA+F+ +G Sbjct: 357 AFFAVFFTWVG 367 >gi|188993114|ref|YP_001905124.1| ABC transporter permease [Xanthomonas campestris pv. campestris str. B100] gi|167734874|emb|CAP53086.1| ABC transporter permease [Xanthomonas campestris pv. campestris] Length = 370 Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 120/364 (32%), Positives = 192/364 (52%), Gaps = 13/364 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R AG+W A+ + +++ +D I ++D+ G ++ F + K Sbjct: 19 VRLAGSWVLATALPQAE-----LLQAVPDGVRRIDARGIGQLDSAGVLQLLRFASRMGLK 73 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + +L+ + KP+R + F +G+ Sbjct: 74 EDAIDFRDEHQ---ALVCTIEELNDERPKPKRDY---GFVAALDRLGRTTHGVGQGILEL 127 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + G +F+ L S + M VG+ VP+V+L+S++ GAVIA G+ Sbjct: 128 NSFLGENLVKIGRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFLGST 185 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAIRT+G Sbjct: 186 ILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIRTLG 245 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD + +L+ PR+ ALI +LPLLT +A + + G V DIP ++ +R H T L Sbjct: 246 LDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDTIQLR 305 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ A+++ Sbjct: 306 HFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWF 365 Query: 369 FAIG 372 +G Sbjct: 366 MKMG 369 >gi|83748501|ref|ZP_00945522.1| ABC transporter permease protein [Ralstonia solanacearum UW551] gi|207742154|ref|YP_002258546.1| abc-type transport system involved in resistance to organic solvents, permease component protein [Ralstonia solanacearum IPO1609] gi|83724805|gb|EAP71962.1| ABC transporter permease protein [Ralstonia solanacearum UW551] gi|206593542|emb|CAQ60469.1| abc-type transport system involved in resistance to organic solvents, permease component protein [Ralstonia solanacearum IPO1609] Length = 374 Score = 297 bits (761), Expect = 2e-78, Method: Composition-based stats. Identities = 102/371 (27%), Positives = 183/371 (49%), Gaps = 12/371 (3%) Query: 4 NGITVFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +G +V +G+W + ++E A ++ ++ L+ + ID GA+L+ Sbjct: 15 DGRSVAYLSGDWTTLALAERAGVRSARRQIRAGLDNANAWCLTEVGRIDHFGAQLLW--- 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + G + + +Q +I R K + + N L G ++ F Sbjct: 72 -RAWGNRWPEHLDARADQ-RRMIDRVARLDPGGWKKRIAPRINPVTVL----GGAMIDFA 125 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + ++G ++ + F + + +G + +Y G + + L+ F+ G V+ Sbjct: 126 DHLRIGVAMVGQLMFDLLRFVRAPH--RGPWREISANIYSTGYKALGITALVGFLIGIVL 183 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + A QL FGA IF ++++ + +RE+G +L A+++AGRSGSAI A+IG M++ EE+D Sbjct: 184 SYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELD 243 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R MG+ LI P++ AL I++PLL + A+ G + DI F + Sbjct: 244 AMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITSLP 303 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 +AN++ G+ K I +VA G + ++ SLG+ TT VV SI+IVI+ D+ Sbjct: 304 DAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIVILADA 363 Query: 363 LFAIFYFAIGI 373 +FAI + +GI Sbjct: 364 VFAILFKDVGI 374 >gi|306840506|ref|ZP_07473265.1| Sulfate transporter/antisigma-factor [Brucella sp. BO2] gi|306843893|ref|ZP_07476488.1| Sulfate transporter/antisigma-factor [Brucella sp. BO1] gi|306275648|gb|EFM57372.1| Sulfate transporter/antisigma-factor [Brucella sp. BO1] gi|306289521|gb|EFM60739.1| Sulfate transporter/antisigma-factor [Brucella sp. BO2] Length = 391 Score = 297 bits (761), Expect = 2e-78, Method: Composition-based stats. Identities = 157/373 (42%), Positives = 229/373 (61%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G V +G+W S + ++ DD + I ++ + +D+S I+ +DT GA LI Sbjct: 23 EQDGARVIHLSGHWISQSV-QLVDDKMRGIEQAGGDKATTIDISGISNLDTAGAWLIERL 81 Query: 62 MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ K ++L+GV L + + + + + FF+ +F N+ +G + Sbjct: 82 RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ND HILG I G + +++ QM +GV +P+V+L+S + Sbjct: 139 ISMFNDFKMAMHILGATIR--GAQLKYGRGNGIPIAAIVTQMDRMGVGAIPIVVLMSTIV 196 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376 Query: 359 IIDSLFAIFYFAI 371 ++D +FA+FY AI Sbjct: 377 VVDGMFAMFYAAI 389 >gi|114320361|ref|YP_742044.1| hypothetical protein Mlg_1205 [Alkalilimnicola ehrlichii MLHE-1] gi|114226755|gb|ABI56554.1| protein of unknown function DUF140 [Alkalilimnicola ehrlichii MLHE-1] Length = 377 Score = 297 bits (761), Expect = 2e-78, Method: Composition-based stats. Identities = 103/369 (27%), Positives = 191/369 (51%), Gaps = 10/369 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 + + +G+W ++ +A + + ++ +D SA+ +D GA + E+ Sbjct: 18 RGLIQCSGDWTRTGLTRLAGQDLRTLPPP-RTGGWTLDASAMGRLDLTGARQLHRLQERL 76 Query: 66 HGKIKLQGV-STHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + + E + L++FT R + + +G++ V + Sbjct: 77 RERGDSVRLGEERPEHMDGLLAFTERAVSERR------PPPPPPGPLERLGRQTVIRLGH 130 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + +G + + + L ++ GV +P++ L++F+TG VIA Sbjct: 131 FWAFLAFIGEIALEALPRLLRPWTIR--WKQLSAEIQKAGVQALPIIGLLAFLTGLVIAY 188 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L ++GA IF ++L+S+ LRE+ +LTA+++AGR+GS+ A++G+MKI EEIDA+ Sbjct: 189 QGGDTLERYGANIFLVELVSVTMLREMAPMLTAIVVAGRTGSSWAAQLGTMKITEEIDAL 248 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 RT+G+ +LI PR+ AL++ LPLLTI A+ I+G +V + + F +R Sbjct: 249 RTLGISPFDMLILPRLMALMVVLPLLTIYADVLGILGGMLVADLMFGVAMHDFINRLPEA 308 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++++ GL+KAP A I +A +G V + S+G+ T VVQ+I +VI+ D++F Sbjct: 309 IATSHLWVGLVKAPVFALIIVGIACFQGMRVKGSAESVGRATTITVVQAIFLVIVTDAVF 368 Query: 365 AIFYFAIGI 373 +I + +G+ Sbjct: 369 SILFNLVGL 377 >gi|190892035|ref|YP_001978577.1| probable ABC transporter, permease protein [Rhizobium etli CIAT 652] gi|190697314|gb|ACE91399.1| probable ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 389 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 158/373 (42%), Positives = 230/373 (61%), Gaps = 11/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S+ R +GNW+S + + D +++ ++ + VDLS IT+IDT G L+ Sbjct: 23 SDGSGQHVRLSGNWRSAYVHLVLRDFEKLLHQ--KTGNLTVDLSEITDIDTAGIWLLCRL 80 Query: 62 M---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 E ++ +G + HI+++ ++ S K + + IGK Sbjct: 81 KKEEEAAGRTVRFEGTNPHIDEMLAMFSEEPAKPEPE----PKEKVSLAARILAPIGKMT 136 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 ++ + +ILG + S++ Q+ ++GV VP+++L+SF+ Sbjct: 137 YDVWDNLAAAMYILGSAVRGAQMKFGRGS--GVSPASIVNQIDHMGVRAVPIILLMSFLI 194 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ Sbjct: 195 GAIIAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMR 254 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA++ MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA++V W Y I FA F Sbjct: 255 EEIDALKVMGLNPIGVLIFPRLVALTIALPLLTVLANFASLAGAAVVAWGYSGITFANFL 314 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 +R H TL+ + +G+IKAPFMA IGIVA EG VG + SLG+ VT VV++I +VI Sbjct: 315 ARLHEAVTLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTASVVKAIFVVI 374 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 375 LMDGLFAMFYAAI 387 >gi|300705335|ref|YP_003746938.1| ABC transporter permease [Ralstonia solanacearum CFBP2957] gi|299072999|emb|CBJ44356.1| putative abc-type transport system, permease component abc transporter protein (resistance to organic solvents) [Ralstonia solanacearum CFBP2957] Length = 374 Score = 296 bits (759), Expect = 3e-78, Method: Composition-based stats. Identities = 102/371 (27%), Positives = 182/371 (49%), Gaps = 12/371 (3%) Query: 4 NGITVFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +G +V +G+W + ++E A ++ ++ L+ + ID GA+L+ Sbjct: 15 DGRSVAYLSGDWTTLALAERAGVRGARRQIRAGLDNANAWCLTEVGRIDHFGAQLLW--- 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + G + + +Q +I R K + N L G ++ F Sbjct: 72 -RAWGNRWPEHLDARADQ-RRMIDRVARLDPGGWKKHIAPRINPVTVL----GGAMLDFA 125 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + ++G ++ + F + + +G + +Y G + + L+ F+ G V+ Sbjct: 126 DHLQIGVAMVGQLMFDLLRFVRAPH--RGPWREISANIYSTGYKALGITALVGFLIGIVL 183 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + A QL FGA IF ++++ + +RE+G +L A+++AGRSGSAI A+IG M++ EE+D Sbjct: 184 SYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELD 243 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R MG+ LI P++ AL I++PLL + A+ G + DI F + Sbjct: 244 AMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITSLP 303 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 +AN++ G+ K I +VA G + ++ SLG+ TT VV SI+IVI+ D+ Sbjct: 304 DAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIVILADA 363 Query: 363 LFAIFYFAIGI 373 +FAI + +GI Sbjct: 364 VFAILFKDVGI 374 >gi|325915744|ref|ZP_08178046.1| hypothetical integral membrane protein [Xanthomonas vesicatoria ATCC 35937] gi|325538008|gb|EGD09702.1| hypothetical integral membrane protein [Xanthomonas vesicatoria ATCC 35937] Length = 370 Score = 296 bits (759), Expect = 3e-78, Method: Composition-based stats. Identities = 118/364 (32%), Positives = 191/364 (52%), Gaps = 13/364 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R +G+W A+ + +++ +D I ++D+ G ++ F + K Sbjct: 19 VRLSGSWVLATALPQAE-----LLQAVPDGVRRIDARGIGQLDSAGVLQLLRFAGRMGLK 73 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + +L+ + KP+R + F +G+ Sbjct: 74 EDAIDFRDEHQ---ALVCTIEELNDERPKPKRDY---GFVAALDRLGRTTHGVGQGILEL 127 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + +F+ L S + M VG+ VP+V+L+S++ GAVIA G+ Sbjct: 128 NSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFLGST 185 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAIRT+G Sbjct: 186 ILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIRTLG 245 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD + +L+ PR+ ALI +LPLLT +A + + G V DIP ++ +R H T L Sbjct: 246 LDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDTIQLR 305 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ A+++ Sbjct: 306 HFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWF 365 Query: 369 FAIG 372 +G Sbjct: 366 MKMG 369 >gi|238028752|ref|YP_002912983.1| hypothetical protein bglu_1g32160 [Burkholderia glumae BGR1] gi|237877946|gb|ACR30279.1| Hypothetical protein bglu_1g32160 [Burkholderia glumae BGR1] Length = 390 Score = 296 bits (758), Expect = 4e-78, Method: Composition-based stats. Identities = 105/386 (27%), Positives = 179/386 (46%), Gaps = 27/386 (6%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI----------------VDLSAI 47 +G + R +G W + ++ VV K + A DLSAI Sbjct: 15 DGGKIVRLSGQWTALALARDRGVVVRRAEKLARGQVARGRRSREPAAADGPARRWDLSAI 74 Query: 48 TEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF 107 +D +G + + + G GV Q + R + P+ ++ Sbjct: 75 ERLDHVGGQALW----RVWGHRLPDGVVLTDNQRI-VFERIERLDEAREAPEPVVRHDPV 129 Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167 L G + +F + G VI + G + +Y G Sbjct: 130 TRL----GLAMFQFGEHLFGGVAMFGRVILDLGAIARRPKTMP--WTEISANVYNAGAKA 183 Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P+ L++F+ G V++ A QL QFGA + ++++ + +RE+G +L+A+++AGRSGSA Sbjct: 184 LPITALVAFLIGIVLSYLSAQQLQQFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSA 243 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A+IG M++ EE+DA+R MG+ ++ PR+ AL +++PLL + N A+ G ++ Sbjct: 244 ITAQIGVMRVTEELDAMRVMGIPHGLRIVLPRVLALGVAMPLLVMWTNIVALSGGALAAK 303 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 I F F +AN++ GL K I +V GF + +S SLG+ T Sbjct: 304 FALGIDFNFFMRSLPGVVPIANLWIGLGKGVVFGMLIALVGCHFGFRIKANSQSLGEGTT 363 Query: 348 TCVVQSISIVIIIDSLFAIFYFAIGI 373 T VV SI++VI+ D++FAI + +G+ Sbjct: 364 TSVVSSITVVILADAVFAILFQNVGL 389 >gi|148545417|ref|YP_001265519.1| hypothetical protein Pput_0160 [Pseudomonas putida F1] gi|148509475|gb|ABQ76335.1| protein of unknown function DUF140 [Pseudomonas putida F1] Length = 377 Score = 295 bits (757), Expect = 5e-78, Method: Composition-based stats. Identities = 120/365 (32%), Positives = 193/365 (52%), Gaps = 9/365 (2%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G+W + + + ++ + + I DLS + +DT GA L+ + Sbjct: 20 LRITGDWTLAHYANLKRESERL--RTQCAANTIADLSQLGRLDTAGASLLAELLGSERLS 77 Query: 69 IKLQGVSTHIEQLF-SLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + + L ++ I ++P+R N L IG + DS Sbjct: 78 RCTHALPEASQALLKNVYCSVQDYCIPVKEPER----NVLLLLLERIGCAVGTLWQDSMQ 133 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +G+++ ++++ ++ + G+ P+V L++F+ GAV+A GA Sbjct: 134 LLGFVGVILETLLRRAFQPHRWR--FTPVVAHIEQTGLDAAPIVALLTFLVGAVVAFLGA 191 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L+ FGA IF++DL++ LRE VLLTA+++AGR+ SA A+IGSMK NEEIDAIRT+ Sbjct: 192 TVLADFGATIFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRTL 251 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GL+ + +L+ PR+ AL+ISLPLLT +A I+G ++V DI A+F S S + Sbjct: 252 GLNPMELLVVPRVLALLISLPLLTFVAMICGIVGGAVVCALTLDISPAMFLSLLQSDIGV 311 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + GL KAPF A I + EGF V + S+G T+ VVQSI +VI++D++ A+F Sbjct: 312 QHFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVIVLDAVAALF 371 Query: 368 YFAIG 372 + +G Sbjct: 372 FMEMG 376 >gi|206575650|ref|YP_002235755.1| putative ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|206570494|gb|ACI12140.1| putative ABC transporter, permease protein [Klebsiella pneumoniae 342] Length = 382 Score = 295 bits (757), Expect = 5e-78, Method: Composition-based stats. Identities = 116/362 (32%), Positives = 197/362 (54%), Gaps = 6/362 (1%) Query: 12 AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKL 71 +G+W + + V + + +AI DLS + +DT GA L++ M + ++L Sbjct: 25 SGDWVLAHYAYLEPAVSALQPQLLS--NAIFDLSQLGTLDTAGATLLVKLMGEKKV-LEL 81 Query: 72 QGVSTHIEQLFSLISFTHRKKIKNQ-KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAH 130 + ++ + ++ T R I+N P L +IGK + F + + Sbjct: 82 ERIAPTLPIERRVLLQTVRSAIQNYVTPPAQHQPGIVTELLANIGKSVESFWQNLVALIG 141 Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190 +GL + ++ + SL+ + +G++ VP++ L++F+ GAVIA G+ L Sbjct: 142 FIGLTMEALFATLLRPAHWR--VTSLVANLQQIGLNAVPIIALLTFMVGAVIAFLGSTVL 199 Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 S FGA IF++ L++ LRE VLL A+++AGR+ SA A+IG MK NEEIDAI+TMGL+ Sbjct: 200 STFGASIFTVQLVAFSFLREFAVLLAAILMAGRTASAFTAQIGLMKANEEIDAIQTMGLN 259 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 V +L+ PR+ AL+++LP++T + I+G +V DI +F + + + Sbjct: 260 PVELLVLPRVLALLVALPMMTFIGMICGILGGIVVCALTLDISPTMFLTIMQNNVGFEHF 319 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + G+IKAP A I I+ EGF V + S+G+ T VV SI +VI++D++ A+F+ Sbjct: 320 WVGMIKAPVFAFLIAIIGCLEGFKVSGSAESVGEHTTASVVHSIFVVILLDAVAALFFME 379 Query: 371 IG 372 +G Sbjct: 380 MG 381 >gi|313682999|ref|YP_004060737.1| hypothetical protein Sulku_1877 [Sulfuricurvum kujiense DSM 16994] gi|313155859|gb|ADR34537.1| protein of unknown function DUF140 [Sulfuricurvum kujiense DSM 16994] Length = 373 Score = 295 bits (757), Expect = 5e-78, Method: Composition-based stats. Identities = 109/364 (29%), Positives = 177/364 (48%), Gaps = 18/364 (4%) Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFMEKYHG 67 +G+W +S+ A ++ I S+ D+S ITEID+ G L E+ Sbjct: 23 CSGSWTIEHLSDAARELEALIPLSL----VTWDMSGITEIDSSGIALWQLTNRTFEERGH 78 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + + +LF L+ KP R + + Y +GK+ + + Sbjct: 79 TCETVNEREDLSRLFRLL---------YSKPFRDVPIPAVPSSLYRLGKETYEIFRGIGT 129 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 LG + S+ + G +P++ L +F+ G V+A Q Sbjct: 130 FLAFLGEAFILFFYTLRHPRLIR--YRSIGVHILETGARALPIIALSAFLIGVVVAYQSV 187 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL +FGA+IF +D++ I RE+ L+TA+++AGRSGSA A+IG+MK+ +EIDA+RTM Sbjct: 188 VQLQKFGADIFIVDMIGISLTRELAPLITAIVVAGRSGSAFTAQIGTMKMTQEIDAMRTM 247 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G D L+ PR+ AL+I +PLL A+ I G ++ + + F+ F R L Sbjct: 248 GFDPFTFLVWPRVIALMIIMPLLIFFADMVGIFGGMVIAQVHSHLSFSEFIHRLQGALAL 307 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + GLIK PF A I V+ GF V +++ S+G+ T VV +I +VI D++F++ Sbjct: 308 KHYLIGLIKGPFFAFLIAFVSTYRGFQVSMNTESIGQYTTKSVVNAIFLVIACDAIFSVL 367 Query: 368 YFAI 371 + Sbjct: 368 LTEL 371 >gi|261855956|ref|YP_003263239.1| hypothetical protein Hneap_1358 [Halothiobacillus neapolitanus c2] gi|261836425|gb|ACX96192.1| protein of unknown function DUF140 [Halothiobacillus neapolitanus c2] Length = 413 Score = 295 bits (757), Expect = 5e-78, Method: Composition-based stats. Identities = 104/374 (27%), Positives = 195/374 (52%), Gaps = 14/374 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDL-SAITEIDTIGAELIMYF 61 + +TV +G W + + ++ + ++D + L S ++ D GA ++ + Sbjct: 49 DRQVTVLVLSGTWTIHSLQHVPTLDTLSGAPTKKADKPCIVLRSEMSAFDGAGALVLARW 108 Query: 62 MEKYHG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + + ++ L L L+ R P + + IG+ Sbjct: 109 IRTWRADGFEVDLGEFPPRETSLLQLLD--DRLVDTEPAPVKKPK------MIARIGQFT 160 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 V+ +++ S LG ++ + ++ + ++I ++ GV + +V L+SF+ Sbjct: 161 VEQWHETRSFLAFLGELVWRGAPLLLTFWRIR--WRAVISEIDAAGVRALGIVGLLSFMI 218 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G V+A QG L +GA + +DL+ I+ LRE+G LL A+++AGR+GS+ A++G+M+I Sbjct: 219 GMVMAYQGGATLQNYGANVLIVDLVGIITLREMGPLLAAIIVAGRTGSSYTAQLGTMRIT 278 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+R +G+ ILI P++ ALII+LPLL+I ++ ++G ++V + + F+V+F Sbjct: 279 EEIDALRAIGVPPFEILIFPKVLALIITLPLLSIFSDLMGLLGGAVVANYGFGVSFSVYF 338 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 R +L ++ GL+K P A I ++ +G V + +G T VVQ+I +VI Sbjct: 339 DRMPEAVSLTTLWLGLLKTPVFAIVIALIGCMQGLRVRGSAAEVGHATTVSVVQAIFMVI 398 Query: 359 IIDSLFAIFYFAIG 372 +ID+LF++ Y +G Sbjct: 399 VIDALFSVLYNVMG 412 >gi|78067712|ref|YP_370481.1| ABC transporter, inner membrane subunit [Burkholderia sp. 383] gi|77968457|gb|ABB09837.1| ABC transporter, inner membrane subunit [Burkholderia sp. 383] Length = 374 Score = 295 bits (757), Expect = 5e-78, Method: Composition-based stats. Identities = 103/366 (28%), Positives = 176/366 (48%), Gaps = 11/366 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R G W + ++ V + + DLS I +D +G + + + G Sbjct: 19 TVRLYGQWTALALARNRGAVARRVASIASGRVSEWDLSGIERLDHVGGQALW----RVWG 74 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + GV+ + Q ++ R + + P+R ++ L G+ I F Sbjct: 75 RKLPPGVALSVTQ-RTIFERIERLDSEREAPERVVRFDPVTRL----GQAIFGFGEHLQG 129 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + GLVI + +Y G +P+ L++F+ G V++ A Sbjct: 130 GIAMFGLVILDALSVLRRPKTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 187 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M Sbjct: 188 QQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ LI PR+ AL I++PLL + N A+ G ++ I F + Sbjct: 248 GIPHGLRLILPRVLALGIAMPLLVMWTNIVALTGGALAAKLVLGIDVNYFVRSLPGVVPI 307 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN++ G+ K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI Sbjct: 308 ANLYIGVGKGIVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIL 367 Query: 368 YFAIGI 373 + +G+ Sbjct: 368 FQNVGL 373 >gi|103485974|ref|YP_615535.1| hypothetical protein Sala_0481 [Sphingopyxis alaskensis RB2256] gi|98976051|gb|ABF52202.1| protein of unknown function DUF140 [Sphingopyxis alaskensis RB2256] Length = 368 Score = 295 bits (757), Expect = 6e-78, Method: Composition-based stats. Identities = 114/371 (30%), Positives = 195/371 (52%), Gaps = 16/371 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +G+ V RF G + ++ + A +DLSAI IDT+GA ++ Sbjct: 12 GADGVEV-RFTGRLTLARLGDLPARLDAL------GPIATLDLSAIDRIDTVGAWIVTRT 64 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + ++ G S ++L ++ K++ ++ + IG V Sbjct: 65 AADHDA--RITGASADAQRLLDALASD-----KSEYRVHRDRRPAWVRMLEQIGTASVAV 117 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 N+ G +I + + + +++ + VGV +P++ L+SF+ G V Sbjct: 118 WNELLGIVGFFGAMIVAIFNQIRARRRLR--WNAIVTRFQTVGVDALPIIGLMSFLIGIV 175 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IAQQGA QL QFG E+F+I+L+ +RE+G+L+TA+M+AGRSGSA A+IG+MK+ EE+ Sbjct: 176 IAQQGAVQLEQFGLEVFTINLVGRASIRELGLLMTAIMVAGRSGSAFAAQIGTMKLTEEV 235 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+RT+G+ + ++ PR+ A I++PLL A+ AI G + W DIP + R Sbjct: 236 DAMRTIGVSPMEAIVLPRVAASTITMPLLGFYASLCAIAGGGLFCWVGLDIPPLTYIQRL 295 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + + + LIKAP IG+ EG V ++ +G++ T+ VV +I +VI++D Sbjct: 296 REIIPMTDFWIMLIKAPVFGILIGVTGCYEGMQVRQNAEEVGQRTTSAVVAAIFLVIVLD 355 Query: 362 SLFAIFYFAIG 372 + FA+F+ ++G Sbjct: 356 AFFAVFFSSLG 366 >gi|327190640|gb|EGE57728.1| putative ABC transporter, permease protein [Rhizobium etli CNPAF512] Length = 383 Score = 295 bits (757), Expect = 6e-78, Method: Composition-based stats. Identities = 158/373 (42%), Positives = 230/373 (61%), Gaps = 11/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S+ R +GNW+S + + D +++ ++ + VDLS IT+IDT G L+ Sbjct: 17 SDGSGQHVRLSGNWRSAYVHLVLRDFEKLLHQ--KAGNLTVDLSEITDIDTAGIWLLCRL 74 Query: 62 M---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 E ++ +G + HI+++ ++ S K + + IGK Sbjct: 75 KKEEEAAGRTVRFEGTNPHIDEMLAMFSEEPAKPEPE----PKEKVSLAARILAPIGKMT 130 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 ++ + +ILG + S++ Q+ ++GV VP+++L+SF+ Sbjct: 131 YDVWDNLAAAMYILGSAVRGAQMKFGRGS--GVSPASIVNQIDHMGVRAVPIILLMSFLI 188 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ Sbjct: 189 GAIIAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMR 248 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA++ MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA++V W Y I FA F Sbjct: 249 EEIDALKVMGLNPIGVLIFPRLVALTIALPLLTVLANFASLAGAAVVAWGYSGITFANFL 308 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 +R H TL+ + +G+IKAPFMA IGIVA EG VG + SLG+ VT VV++I +VI Sbjct: 309 ARLHEAVTLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTASVVKAIFVVI 368 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 369 LMDGLFAMFYAAI 381 >gi|21230110|ref|NP_636027.1| ABC transporter permease [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769899|ref|YP_244661.1| ABC transporter permease [Xanthomonas campestris pv. campestris str. 8004] gi|21111638|gb|AAM39951.1| ABC transporter permease [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575231|gb|AAY50641.1| ABC transporter permease [Xanthomonas campestris pv. campestris str. 8004] Length = 370 Score = 295 bits (757), Expect = 6e-78, Method: Composition-based stats. Identities = 119/364 (32%), Positives = 191/364 (52%), Gaps = 13/364 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R AG+W A+ + +++ +D I ++D+ G ++ F + K Sbjct: 19 VRLAGSWVLATALPQAE-----LLQAVPDGVRRIDARGIGQLDSAGVLQLLRFASRMGLK 73 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + +L+ + KP+R + F +G+ Sbjct: 74 EDAIDFRDEHQ---ALVCTIEELNDERPKPKRDY---GFVAALDRLGRTTHGVGQGILEL 127 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + +F+ L S + M VG+ VP+V+L+S++ GAVIA G+ Sbjct: 128 NSFLGENLVKIARLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFLGST 185 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAIRT+G Sbjct: 186 ILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIRTLG 245 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD + +L+ PR+ ALI +LPLLT +A + + G V DIP ++ +R H T L Sbjct: 246 LDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDTIQLR 305 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ A+++ Sbjct: 306 HFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWF 365 Query: 369 FAIG 372 +G Sbjct: 366 MKMG 369 >gi|313496513|gb|ADR57879.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1] Length = 374 Score = 295 bits (756), Expect = 6e-78, Method: Composition-based stats. Identities = 120/365 (32%), Positives = 193/365 (52%), Gaps = 9/365 (2%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G+W + + + + +D+ DLS + +DT GA L+ + Sbjct: 17 LRITGDWTLAHYASLKRESER-LRSQCPADTVA-DLSQLGRLDTAGASLLAELLGSERLS 74 Query: 69 IKLQGVSTHIEQLF-SLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + + L ++ I ++P+R N L IG+ + DS Sbjct: 75 RCTHALPEASQALLKNVYCSVQDYCIPVKEPER----NVLLLLLERIGRAVGTLWQDSMQ 130 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +G+++ ++++ ++ + G+ P+V L++F+ GAV+A GA Sbjct: 131 LLGFVGVILETLLRRAFQPHRWR--FTPVVAHIEQTGLDAAPIVALLTFLVGAVVAFLGA 188 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L+ FGA IF++DL++ LRE VLLTA+++AGR+ SA A+IGSMK NEEIDAIRT+ Sbjct: 189 TVLADFGATIFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRTL 248 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GL+ + +L+ PR+ AL+ISLPLLT +A I+G ++V DI A+F S S + Sbjct: 249 GLNPMELLVVPRVLALLISLPLLTFVAMICGIVGGAVVCALTLDISPAMFLSLLQSDIGV 308 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + GL KAPF A I + EGF V + S+G T+ VVQSI +VI++D++ A+F Sbjct: 309 QHFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVIVLDAVAALF 368 Query: 368 YFAIG 372 + +G Sbjct: 369 FMEMG 373 >gi|182681137|ref|YP_001829297.1| hypothetical protein XfasM23_0579 [Xylella fastidiosa M23] gi|182631247|gb|ACB92023.1| protein of unknown function DUF140 [Xylella fastidiosa M23] gi|307579585|gb|ADN63554.1| ABC transporter permease [Xylella fastidiosa subsp. fastidiosa GB514] Length = 396 Score = 295 bits (756), Expect = 6e-78, Method: Composition-based stats. Identities = 123/364 (33%), Positives = 198/364 (54%), Gaps = 13/364 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 +G+W + A +++ + + SIQ ++ I ++D+ GA ++ F + K Sbjct: 45 IHLSGSWVLANLLT-ASELLQSYSNSIQH----INARNIDQLDSAGALQLLRFTTRTGLK 99 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + L S I ++ KP+R + F +G +VK + Sbjct: 100 NEAIEFREEHRPLISTIEILDD---EHPKPERDY---GFLAALERLGIAVVKTRRNIIDV 153 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + + +F+ + S + M VG+ VP+V+++S++ GAVIA G+ Sbjct: 154 CSFLGENLVKIAQLAREPRRFR--ITSTVHHMEQVGLDAVPLVVVLSYLVGAVIAFLGST 211 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L FGAEIF ++L++I LRE VLLTA+++AGR+ SA A+IG+MK EEIDAI+T+G Sbjct: 212 ILRNFGAEIFVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEIDAIQTLG 271 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD + +L+ PR+ AL++ LPLLT +A + + G V IP ++ SR H T L Sbjct: 272 LDPIDLLVIPRLIALLVMLPLLTFIAMIAGLAGGITVGAFDLGIPPQMYLSRMHETMQLR 331 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + G+ KAP A IG++ EG V + S+GK T+ VVQ+IS+VIIID+L A+++ Sbjct: 332 HFIIGMSKAPLFALIIGLIGCLEGLKVTGTAQSVGKHTTSSVVQTISLVIIIDALAALWF 391 Query: 369 FAIG 372 +G Sbjct: 392 MRMG 395 >gi|206559095|ref|YP_002229855.1| hypothetical protein BCAL0697 [Burkholderia cenocepacia J2315] gi|198035132|emb|CAR51006.1| putative membrane protein [Burkholderia cenocepacia J2315] Length = 374 Score = 295 bits (756), Expect = 7e-78, Method: Composition-based stats. Identities = 103/366 (28%), Positives = 174/366 (47%), Gaps = 11/366 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R G W + ++ V + + DLS I +D +G + + + G Sbjct: 19 TVRLTGQWTALALARNRGAVARRVASIATGRVSEWDLSGIERLDHVGGQALW----RVWG 74 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + GV+ Q ++ R + + P+R + L G+ I F Sbjct: 75 RKLPAGVALSATQ-RTIFERIERLDSEREAPERVVRVDPVTRL----GQAIFSFGEHLQG 129 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + GLVI + +Y G +P+ L++F+ G V++ A Sbjct: 130 GIAMFGLVILDALSVLRRPQTMP--WRETSANIYSAGAQALPITALVAFLIGIVLSYLSA 187 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M Sbjct: 188 QQLQTFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ L+ PR+ AL +++PLL + N A+ G +I I F + Sbjct: 248 GIPHGLRLVLPRVLALGVAMPLLVMWTNIIALTGGAIAAKFVLGIDVNYFVRSLPGVVPI 307 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN++ GL K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI Sbjct: 308 ANLYIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIL 367 Query: 368 YFAIGI 373 + +G+ Sbjct: 368 FQNVGL 373 >gi|254710104|ref|ZP_05171915.1| Sulfate transporter/antisigma-factor [Brucella pinnipedialis B2/94] gi|261317653|ref|ZP_05956850.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261296876|gb|EEY00373.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] Length = 391 Score = 295 bits (756), Expect = 8e-78, Method: Composition-based stats. Identities = 159/373 (42%), Positives = 230/373 (61%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 23 EQDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERL 81 Query: 62 MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ K ++L+GV L + + + + + FF+ +F N+ +G + Sbjct: 82 RQRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAV 138 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ND HILG I G + +++ QM +GV +P+V+L+S + Sbjct: 139 ISMFNDFKMAMHILGATIR--GAQLKYGRGNGIPIAAIVTQMDRMGVGAIPIVVLMSTIV 196 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F Sbjct: 257 EETDALTVIGLNAVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFI 316 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 377 VVDGLFAMFYAAI 389 >gi|317181149|dbj|BAJ58935.1| hypothetical protein HPF32_1353 [Helicobacter pylori F32] Length = 377 Score = 295 bits (755), Expect = 8e-78, Method: Composition-based stats. Identities = 105/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S VD S +ID + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + I+L VS + ++ K+ + + S Y + + +GK IV+ Sbjct: 72 RERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKESKKY---ELMITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +P+ IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPISILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 VFSIIFSKLNI 377 >gi|239813318|ref|YP_002942228.1| hypothetical protein Vapar_0299 [Variovorax paradoxus S110] gi|239799895|gb|ACS16962.1| protein of unknown function DUF140 [Variovorax paradoxus S110] Length = 388 Score = 295 bits (755), Expect = 9e-78, Method: Composition-based stats. Identities = 97/374 (25%), Positives = 187/374 (50%), Gaps = 15/374 (4%) Query: 2 SENGITVFRFAGNWKSPEISEI--ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 ++G + +G W + +S + + + +D DL I ++D IGA+L+ Sbjct: 24 EQDGRSWTVASGRWTTLAMSSRSAWQALSKDLAGAPPADGRAWDLRPIEQLDHIGAQLLW 83 Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ ++ ++L S + + ++ + P + F H G + Sbjct: 84 DHWRHRWPATLEL---SPQHKAVLDQVAQFTVGTPEEPPPTLAERLRHF----SHTGARG 136 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 ++ D ++G + + + + +G +Y G + + + L+ + Sbjct: 137 LEVARD---FVGLIGQLALDACTLLRAPH--RGPWRDFSGHLYQFGATALHITALVGLLI 191 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G V+A + QL Q+GAE F ++++ + +RE+G +L AV+IAGRSGSAI A+IG M++ Sbjct: 192 GVVLAYLISQQLRQYGAEAFVVNILGLSLIRELGPVLAAVLIAGRSGSAITAQIGVMRVT 251 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE+DA+R MG+ L+ PR+ AL I++PL+++ + +A++G + DI A F Sbjct: 252 EELDAMRVMGIPHGFRLVMPRVMALAIAMPLISLWTSMAALLGGMLAADAALDISPAYFL 311 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 S ++N++ L K+ I ++ G V ++ SLG+ T+ VV SI+ VI Sbjct: 312 SALPRAVPISNLWLALAKSAVFGILIALIGCYFGMKVKPNTESLGRGTTSSVVTSITAVI 371 Query: 359 IIDSLFAIFYFAIG 372 ++D+LFA+ + +G Sbjct: 372 LVDALFAVLFKGVG 385 >gi|146277759|ref|YP_001167918.1| hypothetical protein Rsph17025_1720 [Rhodobacter sphaeroides ATCC 17025] gi|145556000|gb|ABP70613.1| protein of unknown function DUF140 [Rhodobacter sphaeroides ATCC 17025] Length = 366 Score = 294 bits (754), Expect = 1e-77, Method: Composition-based stats. Identities = 109/366 (29%), Positives = 197/366 (53%), Gaps = 15/366 (4%) Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG--- 67 +G ++ ++ A + +D+ A+ +DT GA I+ ++ Sbjct: 13 ISGRLTIETLARTRHNLASAEREG------RLDMGAVEALDTAGAWAILSAQKRAEAGGR 66 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 ++ +S L + ++ + +P+R + +G+++ + S Sbjct: 67 PFEIVNLSEAHRHLLATVAD----AMPEPEPRRRTIPGRPGDGLAQLGQEVAGGLRGSLD 122 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 G V+++ G + + L L+ M G + VP+V L+ F+ G V+A QG+ Sbjct: 123 SMAFFGQVVAHLGGLLIHPRRLR--LTPLVHHMQEAGWNAVPIVTLMGFLIGIVLAFQGS 180 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGAE++ +DL++I LRE+G+LLTA+++AGRSGSA A IGSMK+ EEIDA+R + Sbjct: 181 TQLKAFGAEVYVVDLVAISILRELGILLTAIIVAGRSGSAFTAAIGSMKMREEIDAMRVL 240 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GLD + L+ PR+ AL+I LP+L +A+ + ++G +++ W I +F ++ + + Sbjct: 241 GLDPIDRLVLPRLIALVILLPVLGFIASMAGLVGGALMAWIDLGITPGMFRTQLLADTDV 300 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + GL+KAPF A I ++ +G V ++ SLG + VVQ+I +VI++D+LF++F Sbjct: 301 NHAIIGLVKAPFFAVIIAVIGCHQGMQVSGNAESLGSHTSRSVVQAIFLVIVVDALFSVF 360 Query: 368 YFAIGI 373 + G+ Sbjct: 361 FAVWGL 366 >gi|300692713|ref|YP_003753708.1| abc-type transport system, permease abc transporter protein (resistance to organic solvents) [Ralstonia solanacearum PSI07] gi|299079773|emb|CBJ52450.1| putative abc-type transport system, permease component abc transporter protein (resistance to organic solvents) [Ralstonia solanacearum PSI07] Length = 374 Score = 294 bits (754), Expect = 1e-77, Method: Composition-based stats. Identities = 102/371 (27%), Positives = 182/371 (49%), Gaps = 12/371 (3%) Query: 4 NGITVFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +G +V +G+W + ++E A ++ +++ L+ + ID GA+L+ Sbjct: 15 DGRSVAYLSGDWTTLALAERAGVRSARRQIRAGLNNANAWCLTEVGRIDHFGAQLLW--- 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + G + + +Q +I R K + + N L G + F Sbjct: 72 -RAWGNRWPERLDARPDQ-RRMIDRVARLDPGGWKKRIAPRINPVMVL----GGAMFDFA 125 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ++G ++ + F + + +G + +Y G + + L+ F+ G V+ Sbjct: 126 GHLQIGVAMVGQLMFDLLRFVRAPH--RGPWREISANIYSTGYKALGITALVGFLIGIVL 183 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + A QL FGA IF ++++ + +RE+G +L A+++AGRSGSAI A+IG M++ EE+D Sbjct: 184 SYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELD 243 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R MG+ LI P++ AL I++PLL + A+ G + DI F + Sbjct: 244 AMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITSLP 303 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 +AN++ G+ K I +VA G + ++ SLG+ TT VV SI+IVI+ D+ Sbjct: 304 DAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIVILADA 363 Query: 363 LFAIFYFAIGI 373 +FAI + +GI Sbjct: 364 VFAILFKDVGI 374 >gi|237808113|ref|YP_002892553.1| hypothetical protein Tola_1352 [Tolumonas auensis DSM 9187] gi|237500374|gb|ACQ92967.1| protein of unknown function DUF140 [Tolumonas auensis DSM 9187] Length = 381 Score = 294 bits (754), Expect = 1e-77, Method: Composition-based stats. Identities = 110/370 (29%), Positives = 198/370 (53%), Gaps = 4/370 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 E+G + R +G+W + + + I + D + +DT GA L++ Sbjct: 14 QESGHVLLRISGDWTLTHYVMLKRQITSVQEQMIADTPILWD--DLGSLDTAGAALLVEL 71 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + + + S + +L+ ++ ++ ++ + HIG+ ++ Sbjct: 72 LGQVRLSLLTTQDSGLSAERLALLHSVAAALKESTNIEKQPKESAISEMLAHIGQVVIHL 131 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + +GL I +++ + SL + G++ +P++ L++F+ GAV Sbjct: 132 GQQQIALLGFIGLTIETLVRSLIHPRRWR--ITSLAAHIEQTGLNAIPIIALLTFLVGAV 189 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A G LS FGA I+++DL++ LRE GVLLTA+++AGR+ SA A+IGSMK NEEI Sbjct: 190 VAFLGTTVLSDFGASIYTVDLVAFAFLREFGVLLTAILMAGRTASAFTAQIGSMKANEEI 249 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DAIR +GL+ + +L+ PR+ A++ISLP+LT +A +IG ++V + DI +F + Sbjct: 250 DAIRALGLNPIELLVLPRVLAMLISLPILTFIAMACGMIGGAVVCFLELDITPRLFLTIL 309 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 +++ F G+ KAP A + ++ EGF VG + S+G+ + VVQSI +VI++D Sbjct: 310 QRDIDISHFFVGIGKAPLFAFIVAVIGCLEGFKVGGSAQSVGEHTISSVVQSIFMVILLD 369 Query: 362 SLFAIFYFAI 371 +L A+F+ + Sbjct: 370 ALAALFFMEM 379 >gi|28198464|ref|NP_778778.1| ABC transporter permease [Xylella fastidiosa Temecula1] gi|28056548|gb|AAO28427.1| ABC transporter permease [Xylella fastidiosa Temecula1] Length = 372 Score = 294 bits (754), Expect = 1e-77, Method: Composition-based stats. Identities = 123/364 (33%), Positives = 198/364 (54%), Gaps = 13/364 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 +G+W + A +++ + + SIQ ++ I ++D+ GA ++ F + K Sbjct: 21 IHLSGSWVLANLLT-ASELLQSYSNSIQH----INARNIDQLDSAGALQLLRFTTRTGLK 75 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + L S I ++ KP+R + F +G +VK + Sbjct: 76 NEAIEFREEHRPLISTIEILDD---EHPKPERDY---GFLAALERLGIAVVKTRRNIIDV 129 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + + +F+ + S + M VG+ VP+V+++S++ GAVIA G+ Sbjct: 130 CSFLGENLVKIAQLAREPRRFR--ITSTVHHMEQVGLDAVPLVVVLSYLVGAVIAFLGST 187 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L FGAEIF ++L++I LRE VLLTA+++AGR+ SA A+IG+MK EEIDAI+T+G Sbjct: 188 ILRNFGAEIFVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEIDAIQTLG 247 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD + +L+ PR+ AL++ LPLLT +A + + G V IP ++ SR H T L Sbjct: 248 LDPIDLLVIPRLIALLVMLPLLTFIAMIAGLAGGITVGAFDLGIPPQMYLSRMHETMQLR 307 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + G+ KAP A IG++ EG V + S+GK T+ VVQ+IS+VIIID+L A+++ Sbjct: 308 HFIIGMSKAPLFALIIGLIGCLEGLKVTGTAQSVGKHTTSSVVQTISLVIIIDALAALWF 367 Query: 369 FAIG 372 +G Sbjct: 368 MRMG 371 >gi|71274907|ref|ZP_00651195.1| Protein of unknown function DUF140 [Xylella fastidiosa Dixon] gi|71898795|ref|ZP_00680963.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1] gi|71901849|ref|ZP_00683912.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1] gi|170729829|ref|YP_001775262.1| ABC transporter permease [Xylella fastidiosa M12] gi|71164639|gb|EAO14353.1| Protein of unknown function DUF140 [Xylella fastidiosa Dixon] gi|71728377|gb|EAO30545.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1] gi|71731381|gb|EAO33444.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1] gi|167964622|gb|ACA11632.1| ABC transporter permease [Xylella fastidiosa M12] Length = 372 Score = 294 bits (754), Expect = 1e-77, Method: Composition-based stats. Identities = 122/364 (33%), Positives = 197/364 (54%), Gaps = 13/364 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 +G+W + A +++ + + SIQ ++ I ++D+ GA ++ F + K Sbjct: 21 IHLSGSWVLANVLT-ASELLQSYSNSIQH----INARNIDQLDSAGALQLLRFATRTGLK 75 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + L S I ++ KP+R + F +G +VK + Sbjct: 76 NEAIEFREEHRPLISTIEILDD---EHPKPERDY---GFLAALERLGIAVVKTRRNIIDV 129 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + + +F+ + S + M VG+ VP+V+++S++ GAVIA G+ Sbjct: 130 CSFLGENLVKIAQLAREPRRFR--ITSTVHHMEQVGLDAVPLVVVLSYLVGAVIAFLGST 187 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L FGAEIF ++L++I LRE VLLTA+++AGR+ SA A+IG+MK EEIDAI+T+G Sbjct: 188 ILRNFGAEIFVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEIDAIQTLG 247 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD + +L+ PR+ AL++ LPLLT +A + + G V IP ++ SR H T Sbjct: 248 LDPIDLLVIPRLIALLVMLPLLTFIAMIAGLAGGITVGAFDLGIPPQMYLSRMHETMQFR 307 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + G+ KAP A IG++ EG V + S+GK T+ VVQ+IS+VIIID+L A+++ Sbjct: 308 HFIIGMSKAPLFALIIGLIGCLEGLKVTGTAQSVGKHTTSSVVQTISLVIIIDALAALWF 367 Query: 369 FAIG 372 +G Sbjct: 368 MRMG 371 >gi|319956950|ref|YP_004168213.1| hypothetical protein Nitsa_1211 [Nitratifractor salsuginis DSM 16511] gi|319419354|gb|ADV46464.1| protein of unknown function DUF140 [Nitratifractor salsuginis DSM 16511] Length = 371 Score = 294 bits (754), Expect = 1e-77, Method: Composition-based stats. Identities = 109/369 (29%), Positives = 178/369 (48%), Gaps = 16/369 (4%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---ME 63 T+ G+W + I ++ ++ +D + D+ G L++ M+ Sbjct: 15 TLIECQGDWTLDQARLIEKELRRL--PLPETPRCRIDFGKVQRFDSAGILLLLELRERMK 72 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 K ++ G+ E++ LI R + P+R + L + IGK V+ + Sbjct: 73 KAGKACEITGLDEKKEKMLHLIE---RGYGEEPLPKRR------EGLLWRIGKATVEELK 123 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 H LG + + F+ + + + + GV+ + ++ L SF+ G VIA Sbjct: 124 VVRDFFHFLGELSVSFLRLLFKPSNFR--MRETVYHIQHSGVNALFIIGLTSFLVGLVIA 181 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 + QL QFGA+I+ +D + I RE+G ++TA++IAGRS S+ AEIG+MKI EEI A Sbjct: 182 YESLVQLVQFGADIYVVDGIGIAITRELGPMITAIVIAGRSASSYAAEIGTMKITEEIAA 241 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 ++T+G D L+ PRI A++I+LPLL ++ I+G I D+ F F R Sbjct: 242 MQTLGFDPFYFLVIPRIVAMMIALPLLIFFSDVIGILGGMIATKVQVDLSFTFFIERLQE 301 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + G++K PF A I GF V + S+G + T VV +I VI D+L Sbjct: 302 VLAAKHYILGIVKGPFFALIIAATGCFHGFRVTGDTESIGIETTASVVHAIFFVIACDAL 361 Query: 364 FAIFYFAIG 372 FA+ Y +G Sbjct: 362 FAVIYTQLG 370 >gi|15837904|ref|NP_298592.1| hypothetical protein XF1303 [Xylella fastidiosa 9a5c] gi|9106294|gb|AAF84112.1|AE003963_9 conserved hypothetical protein [Xylella fastidiosa 9a5c] Length = 396 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 123/364 (33%), Positives = 196/364 (53%), Gaps = 13/364 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 +G+W + A +++ + + SIQ ++ I ++D+ GA ++ F + K Sbjct: 45 IHLSGSWVLANVLT-ASELLQSYSNSIQH----INARNIDQLDSAGALQLLRFATRTGLK 99 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 G L S I + KP+R + F +G +VK + Sbjct: 100 NDAIGFREEHRPLISTIEILDD---EYPKPERDY---GFLAALERLGIAVVKTRRNIVDV 153 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + + +F+ + S + M VG+ VP+V+++S++ GAVIA G+ Sbjct: 154 CSFLGENLVKIAQLAREPRRFR--ITSTVHHMEQVGLDAVPLVVVLSYLVGAVIAFLGST 211 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L FGAEIF ++L++I LRE VLLTA+++AGR+ SA A+IG+MK EEIDAI+T+G Sbjct: 212 ILRNFGAEIFVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEIDAIQTLG 271 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD + +L+ PR+ AL++ LPLLT +A + + G V IP ++ SR H T Sbjct: 272 LDPIDLLVIPRLIALLVMLPLLTFIAMIAGLAGGITVGAFDLGIPPQMYLSRMHETMQFR 331 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + G+ KAP A IG++ EG V + S+GK T+ VVQ+IS+VIIID+L A+++ Sbjct: 332 HFIIGMSKAPLFALIIGLIGCLEGLKVTGTAQSVGKHTTSSVVQTISLVIIIDALAALWF 391 Query: 369 FAIG 372 +G Sbjct: 392 MRMG 395 >gi|325923308|ref|ZP_08184981.1| conserved hypothetical integral membrane protein [Xanthomonas gardneri ATCC 19865] gi|325546235|gb|EGD17416.1| conserved hypothetical integral membrane protein [Xanthomonas gardneri ATCC 19865] Length = 370 Score = 294 bits (753), Expect = 2e-77, Method: Composition-based stats. Identities = 121/364 (33%), Positives = 193/364 (53%), Gaps = 13/364 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R AG+W A +++ A+ I+ +D I ++D+ G ++ F + K Sbjct: 19 VRLAGSWVLATALPQA-ELLQAVPDGIRR----IDARGIAQLDSAGVLQLLRFASRMGLK 73 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + +L+ + KP+R + F +G+ Sbjct: 74 EDAIDFRDEHQ---ALVCTIEELNDERPKPKRDY---GFVAALDRLGRTTHGVGQGILEL 127 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + +F+ L S + M VG+ VP+V+L+S++ GAVIA G+ Sbjct: 128 NSFLGENLVKIARLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFLGST 185 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAIRT+G Sbjct: 186 ILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIRTLG 245 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD + +L+ PR+ ALI +LPLLT +A + + G V DIP ++ +R H T L Sbjct: 246 LDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDTIQLR 305 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ A+++ Sbjct: 306 HFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWF 365 Query: 369 FAIG 372 +G Sbjct: 366 MKMG 369 >gi|317178170|dbj|BAJ55959.1| hypothetical protein HPF16_1362 [Helicobacter pylori F16] Length = 377 Score = 294 bits (752), Expect = 2e-77, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S VD S +ID + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + Y + + +GK IV+ Sbjct: 72 KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKEGKKY---ELMITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +P+ IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPISILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 VFSIIFSKLNI 377 >gi|154243867|ref|YP_001409440.1| hypothetical protein Xaut_5005 [Xanthobacter autotrophicus Py2] gi|154162989|gb|ABS70204.1| protein of unknown function DUF140 [Xanthobacter autotrophicus Py2] Length = 344 Score = 294 bits (752), Expect = 2e-77, Method: Composition-based stats. Identities = 131/361 (36%), Positives = 198/361 (54%), Gaps = 19/361 (5%) Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK 70 +G W + + + V+LS IT +DT GA L+ + + Sbjct: 1 MSGRWDAVCAAH------------ADAKVVSVNLSGITRMDTFGAILLERLCGAWEQEGS 48 Query: 71 LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAH 130 + VS+ + L+ R + R + + +G ++V D + Sbjct: 49 VPQVSSLDPRYQRLMQELERSDSRPHPQTRRS-----EGILERLGHEVVNTAKDGLDLLN 103 Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190 +G V+S G F+ S + Q+ VG VP+++LI+F+ G++IAQQ F Sbjct: 104 FIGAVVSAMGRVAVRPRSFR--FTSTVAQLDRVGFRAVPIILLITFLVGSIIAQQSIFHF 161 Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 +FGA+IF +D++ +L LRE+GVL+ ++MIAGRSGSA AE+GSM++ EE+DA++ MGLD Sbjct: 162 RRFGADIFVVDMVGVLVLRELGVLIVSIMIAGRSGSAYTAELGSMRMREEVDALKVMGLD 221 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 + +L+ PRI ALII LPLLT L + +A+IG +V W Y I VF R L Sbjct: 222 PIEVLVVPRILALIIGLPLLTFLGSMAALIGGGLVAWFYGGITPNVFIDRLKQAIDLTQF 281 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+ KAPFMA AIG+VA EG VG + SLG+ T VV++I +VI++D LFA+F+ + Sbjct: 282 EVGMYKAPFMAAAIGLVACLEGLKVGGSAESLGQHTTASVVKAIFLVIVMDGLFAVFFAS 341 Query: 371 I 371 I Sbjct: 342 I 342 >gi|153009437|ref|YP_001370652.1| hypothetical protein Oant_2107 [Ochrobactrum anthropi ATCC 49188] gi|151561325|gb|ABS14823.1| protein of unknown function DUF140 [Ochrobactrum anthropi ATCC 49188] Length = 391 Score = 294 bits (752), Expect = 2e-77, Method: Composition-based stats. Identities = 156/373 (41%), Positives = 226/373 (60%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G R +G W S + + DD + ++ K+ + + I+D+S ++ +DT GA LI Sbjct: 23 EQDGARHIRLSGRWVSQSV-NLVDDKMRSLEKTDEHKATIIDVSGVSGLDTAGAWLIERL 81 Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ +L+GV L + + + + ++ FF+ SF +G + Sbjct: 82 RQRLVAKSADAQLEGVRQSWLPLMEEVGQAVERTLDIPRQKKPFFFISF---LAALGGGV 138 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ND HILG I G + +++ QM +GV +P++IL+S + Sbjct: 139 ISMGNDFKMAMHILGATIR--GAQLKYGRGSGIPIAAIVTQMDRMGVGAIPIIILMSTIV 196 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 197 GAIIAQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMR 256 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ +GL+ V +L+ PR+ AL++ LPLLTI+++ +A+IGA V W Y +I F Sbjct: 257 EETDALTVIGLNPVGVLVFPRLVALVVVLPLLTIISDLAALIGAGGVAWFYSNISPDAFI 316 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 SR H L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI Sbjct: 317 SRLHDAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVI 376 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 377 VVDGLFAMFYAAI 389 >gi|308062730|gb|ADO04618.1| putative ABC transport system permease protein [Helicobacter pylori Cuz20] Length = 377 Score = 294 bits (752), Expect = 2e-77, Method: Composition-based stats. Identities = 107/371 (28%), Positives = 182/371 (49%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S VD S +ID + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + S Y + + +GK IVK Sbjct: 72 KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKASKRY---ELMITKLGKSIVKTY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 VFSIIFSKLNI 377 >gi|325273982|ref|ZP_08140141.1| hypothetical protein G1E_12667 [Pseudomonas sp. TJI-51] gi|324100871|gb|EGB98558.1| hypothetical protein G1E_12667 [Pseudomonas sp. TJI-51] Length = 374 Score = 294 bits (752), Expect = 2e-77, Method: Composition-based stats. Identities = 116/364 (31%), Positives = 190/364 (52%), Gaps = 7/364 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R AG+W + + D ++ + + DLS + +DT GA L+ + Sbjct: 17 LRIAGDWTLAHYASLKRDSERL--RAQYTPDTVADLSQLGRLDTAGASLLAELLGTERLS 74 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + +L+ ++ P + N L IG + DS Sbjct: 75 RCTHDLPEASR---ALLKNVYQSVQDYCIPVKEPERNVLLLLLERIGCAVGTLWQDSMQL 131 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G+++ ++++ + ++ + G+ P+V L++F+ GAV+A GA Sbjct: 132 LGFIGVILETLLRRALQPHRWR--ITPVVAHIEQTGLDAAPIVALLTFLVGAVVAFLGAT 189 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L+ FGA +F++DL++ LRE VLLTA+++AGR+ SA A+IGSMK NEEIDAIRT+G Sbjct: 190 VLADFGATVFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRTLG 249 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 L+ + +L+ PR+ AL+I+LPLLT +A I+G ++V I A+F S S + Sbjct: 250 LNPMELLVVPRVLALLITLPLLTFVAMLCGIVGGAVVCALSLGISPAMFLSLLQSDIGVQ 309 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + GL KAPF A I + EGF V + S+G T+ VVQSI +VI++D++ A+F+ Sbjct: 310 HFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVIVLDAVAALFF 369 Query: 369 FAIG 372 +G Sbjct: 370 MEMG 373 >gi|317182671|dbj|BAJ60455.1| hypothetical protein HPF57_1381 [Helicobacter pylori F57] Length = 377 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S VD S +ID + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + Y + + +GK IV+ Sbjct: 72 KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKKY---ELMITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +P+ IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPISILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 VFSIIFSKLNI 377 >gi|299068161|emb|CBJ39380.1| putative abc-type transport system, permease component abc transporter protein (resistance to organic solvents) [Ralstonia solanacearum CMR15] Length = 374 Score = 293 bits (751), Expect = 3e-77, Method: Composition-based stats. Identities = 98/371 (26%), Positives = 178/371 (47%), Gaps = 12/371 (3%) Query: 4 NGITVFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +G +V +G+W + ++E A ++ + + L+ + ID GA+L+ Sbjct: 15 DGRSVAYLSGDWTTLALAERAGVRSARRQIRTGLNTANAWCLTEVGRIDHFGAQLLWRAW 74 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 +L ++ ++ K + R N +G ++ F Sbjct: 75 GNRWP--ELLDARPDQRRMIDRVARLDPGGWKKRIAPR-------INPVAVLGNAMLDFA 125 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ++G ++ + F + + +G + +Y G + + L+ F+ G V+ Sbjct: 126 EHLRIGVAMVGQLVFDLLRFVRAPH--RGPWREISANIYSTGYKALGITALVGFLIGIVL 183 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + A QL FGA IF ++++ + +RE+G +L A+++AGRSGSAI A+IG M++ EE+D Sbjct: 184 SYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELD 243 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R MG+ LI P++ AL I++PLL + A+ G + DI F + Sbjct: 244 AMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITSLP 303 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 +AN++ G+ K I + A G + ++ SLG+ TT VV SI+IVI+ D+ Sbjct: 304 DAVPVANLWLGIGKGVVFGMLIALAACHFGLRIQPNTQSLGEGTTTSVVVSITIVILADA 363 Query: 363 LFAIFYFAIGI 373 +FAI + +GI Sbjct: 364 VFAILFKDVGI 374 >gi|17545032|ref|NP_518434.1| hypothetical protein RSc0313 [Ralstonia solanacearum GMI1000] gi|17427322|emb|CAD13841.1| putative abc-type transport system involved in resistance to organic solvents, permease component abc transporter protein [Ralstonia solanacearum GMI1000] Length = 374 Score = 293 bits (751), Expect = 3e-77, Method: Composition-based stats. Identities = 103/373 (27%), Positives = 184/373 (49%), Gaps = 16/373 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVD---LSAITEIDTIGAELIMY 60 +G +V +G+W + ++E A V + + I++ + L+ + ID GA+L+ Sbjct: 15 DGRSVAYLSGDWTTLALAERAG--VRSARRQIRAGLNTANAWCLTEVGRIDHFGAQLLW- 71 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 + G + + +Q +I R K + + N L G ++ Sbjct: 72 ---RAWGNRWPELLDARPDQ-RRMIDRVARLDPGGWKKRIAPRINPVTVL----GNAMLD 123 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 F ++G ++ + F + + +G + +Y G + + L+ F+ G Sbjct: 124 FARHLRIGVAMVGQLMFDLLRFVRAPH--RGPWREISANIYSTGYKALGITALVGFLIGI 181 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V++ A QL FGA IF ++++ + +RE+G +L A+++AGRSGSAI A+IG M++ EE Sbjct: 182 VLSYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEE 241 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +DA+R MG+ LI P++ AL I++PLL + A+ G + DI F + Sbjct: 242 LDAMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALGGGILAARFQLDISPTYFITS 301 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 +AN++ G+ K I + A G + ++ SLG+ TT VV SI+IVI+ Sbjct: 302 LPDAVPVANLWLGIGKGVVFGMLIALTACHFGLRIQPNTQSLGEGTTTSVVVSITIVILA 361 Query: 361 DSLFAIFYFAIGI 373 D++FAI + +GI Sbjct: 362 DAVFAILFKDVGI 374 >gi|188580085|ref|YP_001923530.1| hypothetical protein Mpop_0817 [Methylobacterium populi BJ001] gi|179343583|gb|ACB78995.1| protein of unknown function DUF140 [Methylobacterium populi BJ001] Length = 382 Score = 293 bits (751), Expect = 3e-77, Method: Composition-based stats. Identities = 136/371 (36%), Positives = 209/371 (56%), Gaps = 14/371 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF-- 61 +G + G W + + + I + +VDLS + +DT+GA ++ Sbjct: 21 DGRVILH--GRWTADQ-GPAVESASARIAAQGRRQPVLVDLSGLARLDTLGAWVLERTRA 77 Query: 62 -MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 +E G++ G L + ++ +P N L G+++ + Sbjct: 78 EIEAAGGRLAYAGARPEHRILLGEMG------LREPEPAPRDARNPVVRLLDGTGRRVAR 131 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 N+ S LG V++ G F+ + +L+ Q+ V + GVP+++LISF+ G Sbjct: 132 GGNEILSGIAFLGEVVAAGGRVARRPQTFR--MAALVNQLEQVALRGVPIIVLISFLVGG 189 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 ++AQQG FQL +FGA+ F ++L+ +L LRE+GVLLT++M+AGRSGSA AEIGSM++ EE Sbjct: 190 IVAQQGIFQLQRFGAQSFVVNLIGLLILRELGVLLTSIMVAGRSGSAFTAEIGSMRMREE 249 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +DA+R MGLD + ILI PRI AL+I LP+L L + +A+ G + Y + F +R Sbjct: 250 VDALRVMGLDPIEILILPRILALVIGLPILAFLGSLAALAGGGLTAAIYGGMTVDAFLAR 309 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + + + GLIKAPFMA IGI+A EGFAV + SLG+ VT VV+SI +VI++ Sbjct: 310 LQAAVSFHHFAVGLIKAPFMALTIGIIATIEGFAVEGSAESLGRHVTASVVKSIFMVIVL 369 Query: 361 DSLFAIFYFAI 371 D LFA+F+ AI Sbjct: 370 DGLFAVFFAAI 380 >gi|308185234|ref|YP_003929367.1| putative ABC transport system permease protein [Helicobacter pylori SJM180] gi|308061154|gb|ADO03050.1| putative ABC transport system permease protein [Helicobacter pylori SJM180] Length = 377 Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats. Identities = 106/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S VD S +ID + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + I+L VS + ++ K+ + + S Y + L +GK +V+ Sbjct: 72 RERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKASKQY---ELLITKLGKSLVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 IFSILFSKLNI 377 >gi|261840140|gb|ACX99905.1| hypothetical protein HPKB_1368 [Helicobacter pylori 52] Length = 377 Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S VD S +ID + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + Y + + +GK IV+ Sbjct: 72 KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKKY---ELMITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +P+ IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPISILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 VFSIIFSKLNI 377 >gi|317014880|gb|ADU82316.1| hypothetical protein HPGAM_07715 [Helicobacter pylori Gambia94/24] Length = 377 Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats. Identities = 103/371 (27%), Positives = 180/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + VD S +ID + + + Sbjct: 14 DGANSVLILRGDWDFRTSVFRLDELKKNLLDH--QGPLKVDFSGCQKIDFVFGMFLFDLI 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + Y + + +GK +V+ Sbjct: 72 KERSLNIELCNVSENNACALKVVKDWLEKEDDLESKKAGKKY---ELMITKLGKSLVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 IFSILFSKLNI 377 >gi|315585855|gb|ADU40236.1| ABC superfamily ATP binding cassette transporter permease protein [Helicobacter pylori 35A] Length = 377 Score = 293 bits (750), Expect = 4e-77, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 180/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S VD S +ID + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + I+L VS + ++ K+ + + Y + + +GK IV+ Sbjct: 72 RERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKVGKKY---ELMITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +P+ IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPISILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 VFSIIFSKLNI 377 >gi|104779408|ref|YP_605906.1| ABC transporter permease [Pseudomonas entomophila L48] gi|95108395|emb|CAK13089.1| putative ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 374 Score = 292 bits (749), Expect = 4e-77, Method: Composition-based stats. Identities = 121/372 (32%), Positives = 196/372 (52%), Gaps = 9/372 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++ T AG+W + + + S D VDLS + +DT GA L+ Sbjct: 10 TQQQPTRLHIAGDWTLAHYASLKRECERL--GSQYGDDTQVDLSQLGRLDTAGASLLAEL 67 Query: 62 MEKYHGKIKLQGVSTHIEQL-FSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 + G +L + + +L+ + P + L IG+ + + Sbjct: 68 L----GSERLSHCTDDLPDASRALLKNVYCSVQDYCIPVKQPEQPVLLLLLARIGRAVDQ 123 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 D+ +GL++ ++++ + ++ + G+ P+V L++F+ GA Sbjct: 124 LWQDTRQVLGFIGLILETLLLRLFQPHRWR--VTPVVAHLEQTGLDAAPIVALLTFLVGA 181 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A GA L+ FGA IF++DL++ LRE VLLTA+++AGR+ SA A+IGSMK NEE Sbjct: 182 VVAFLGATVLAAFGATIFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEE 241 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDAIRT+GL+ + +L+ PR+ AL+I+LPLLT LA ++G ++V DI A+F S Sbjct: 242 IDAIRTLGLNPIELLVVPRVLALLIALPLLTFLAMLCGLVGGAVVCALTLDISPAMFLSL 301 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 S + + GL KAPF A I + EGF V + S+G T+ VVQSI +VI++ Sbjct: 302 LQSDIGVQHFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVIVL 361 Query: 361 DSLFAIFYFAIG 372 D++ A+F+ +G Sbjct: 362 DAVAALFFMEMG 373 >gi|317179642|dbj|BAJ57430.1| hypothetical protein HPF30_1333 [Helicobacter pylori F30] Length = 377 Score = 292 bits (749), Expect = 4e-77, Method: Composition-based stats. Identities = 106/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S VD S +ID + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + Y + L +GK IV+ Sbjct: 72 KERSLDIELCNVSENNACALKVVKDWLEKEEDLESKKAGKHY---ELLITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 VFSIIFSKLNI 377 >gi|261838741|gb|ACX98507.1| ABC transport system permease [Helicobacter pylori 51] Length = 377 Score = 292 bits (749), Expect = 4e-77, Method: Composition-based stats. Identities = 105/371 (28%), Positives = 180/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S VD S +ID + + + Sbjct: 14 DGADSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + I+L VS + ++ K+ + + Y + + +GK IV+ Sbjct: 72 RERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKKY---ELMITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 VFSIIFSKLNI 377 >gi|170734244|ref|YP_001766191.1| hypothetical protein Bcenmc03_2910 [Burkholderia cenocepacia MC0-3] gi|169817486|gb|ACA92069.1| protein of unknown function DUF140 [Burkholderia cenocepacia MC0-3] Length = 374 Score = 292 bits (749), Expect = 5e-77, Method: Composition-based stats. Identities = 102/366 (27%), Positives = 173/366 (47%), Gaps = 11/366 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R G W + ++ V I + DLS I +D +G + + + G Sbjct: 19 TVRLTGQWTALSLARNRGAVARRIASIAAGRVSEWDLSGIERLDHVGGQALW----RVWG 74 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + GV+ Q ++ R + + P+R ++ L G I F Sbjct: 75 RKLPAGVALSATQ-RTIFERIERLDSEREAPERIVRFDPVTRL----GLAIFAFGEHLQG 129 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + G VI + +Y G +P+ L++F+ G V++ A Sbjct: 130 GIAMFGRVILDALSVLRRPKTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 187 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M Sbjct: 188 QQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ LI PR+ AL +++PLL + N A+ G ++ I F + Sbjct: 248 GIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKLVLGIDINYFVRSLPGVVPI 307 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN++ G+ K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI Sbjct: 308 ANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIL 367 Query: 368 YFAIGI 373 + +G+ Sbjct: 368 FQNVGL 373 >gi|188528238|ref|YP_001910925.1| hypothetical protein HPSH_07510 [Helicobacter pylori Shi470] gi|188144478|gb|ACD48895.1| hypothetical protein HPSH_07510 [Helicobacter pylori Shi470] gi|308064225|gb|ADO06112.1| putative ABC transport system permease protein [Helicobacter pylori Sat464] Length = 377 Score = 292 bits (748), Expect = 5e-77, Method: Composition-based stats. Identities = 105/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S VD S +ID + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + Y + + +GK IV+ Sbjct: 72 KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKVGKRY---ELMITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 VFSIIFSKLNI 377 >gi|153951693|ref|YP_001398923.1| ABC transporter permease [Campylobacter jejuni subsp. doylei 269.97] gi|152939139|gb|ABS43880.1| putative ABC transporter, permease protein [Campylobacter jejuni subsp. doylei 269.97] Length = 369 Score = 292 bits (747), Expect = 7e-77, Method: Composition-based stats. Identities = 114/369 (30%), Positives = 187/369 (50%), Gaps = 13/369 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 G W I ++ +A+ IQS I D + EIDT G + ++ Sbjct: 11 TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKEIDTAGVRFFLALENDLKD 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + KI +G+++ + LF L +++ K +K ++F +GK ++ + Sbjct: 68 KNIKITKEGLNSRFQTLFELCEKNYQRLNKTKKSHKNFS-----EYFIDLGKLSLELLKI 122 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G ++ + F+ ++ + + +P+VIL + + G V+A Sbjct: 123 LRKFINFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q A+QL+QFGA IF +DLM I RE+ L+ A++IAGRS S+ A+IG MKI +EI A+ Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 TMG +I PR+ AL++++PL+ +++ +IIG +V DI FA F RF Sbjct: 241 NTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREA 300 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + +IF GL+KAP IG++A GF V + S+G T VV +I VI D+LF Sbjct: 301 VDIKHIFIGLVKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF 360 Query: 365 AIFYFAIGI 373 ++ + GI Sbjct: 361 SVILTSAGI 369 >gi|226942634|ref|YP_002797707.1| ABC transporter protein [Azotobacter vinelandii DJ] gi|226717561|gb|ACO76732.1| ABC transporter protein [Azotobacter vinelandii DJ] Length = 382 Score = 291 bits (746), Expect = 9e-77, Method: Composition-based stats. Identities = 111/364 (30%), Positives = 190/364 (52%), Gaps = 12/364 (3%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH----GK 68 G+W + ++ A + + ++D + +DT GA L++ + + Sbjct: 26 GDWTLQHYPRLKREIERARPRLDDACPVVLD--GLGALDTAGAGLLVELLGARRLTDIAR 83 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 Q + L ++ ++P+RS + K+ HIG+ + + Sbjct: 84 WAPQLPAERQALLRTVAMAVAGAAGTEEEPERS----TLKDELAHIGRVVETLWEQQRTL 139 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +GL +S +++ + L+ + G+ VP+V L++F+ GAV+A GA Sbjct: 140 YGFIGLTLSTLLATLPRPRRWR--ITPLVAHIERTGLDAVPIVALLTFMVGAVVAFLGAT 197 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L QFGA I++++L++ LRE GVLL A+++AGR+ SA A+IG+MK NEEIDAIR +G Sbjct: 198 VLGQFGATIYTVNLVAYSFLREFGVLLCAILMAGRTASAFAAQIGAMKANEEIDAIRALG 257 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD + +L+ PR+ A++++LP+LT +A I+G V DI +F+ + Sbjct: 258 LDPIELLVLPRVLAMLLTLPILTFIAMLCGILGGLAVCVLALDISPVQYFAILEQEIPVN 317 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + GL KAP A I ++ EGF + S+G++ T+ VVQSI +VI+ID+L A+F Sbjct: 318 HYLVGLGKAPLFAFLIAVIGCLEGFKASGSAQSVGERTTSSVVQSIFMVILIDALAALFL 377 Query: 369 FAIG 372 +G Sbjct: 378 MEMG 381 >gi|307638119|gb|ADN80569.1| organic solvent resistant ABC transporter [Helicobacter pylori 908] gi|325996719|gb|ADZ52124.1| putative ABC transport system, permease protein [Helicobacter pylori 2018] Length = 377 Score = 291 bits (746), Expect = 9e-77, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 182/371 (49%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S +D S +ID + + + Sbjct: 14 DGANSVLILRGDWDFRTSVFRLDELKKNLLDH--QGSLKMDFSGCQKIDFVFGMFLFDLI 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + Y + + +GK +V+ Sbjct: 72 KERSLNIELCNVSENNACALKVVKDWLEKEDDLESKKAGKKY---ELMITKLGKSLVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + RFH Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRFH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 IFSILFSKLNI 377 >gi|326315184|ref|YP_004232856.1| hypothetical protein Acav_0366 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372020|gb|ADX44289.1| protein of unknown function DUF140 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 375 Score = 291 bits (746), Expect = 1e-76, Method: Composition-based stats. Identities = 90/371 (24%), Positives = 178/371 (47%), Gaps = 14/371 (3%) Query: 6 ITVFRFAGNWKSPEIS--EIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-YFM 62 V G W + E+ + + K+ + DL + +D +GA+L+ ++ Sbjct: 16 GPVAALLGRWGAAELGTRPAWKALSAQLAKTPPAAGLGWDLRGVEWLDHVGAQLLWNHWG 75 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ ++ + G ++ + + P+ + +G K++ + Sbjct: 76 REWPERLSVDGAQR------DMLERVAEYTVTRRPPESPWR---LAEEVDRLGVKVLSAL 126 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ++G ++ + + + + +Y +G + +P+ ++ F+ G V+ Sbjct: 127 GHGRHLLELVGQLMIDLVRVVRAPR--RAPWRDISGHLYRMGATALPITAIVGFLIGVVL 184 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A + QL QFGAE F ++++ I +RE+G +L A+++AGRSGSAI A+IG M++ EE+D Sbjct: 185 AYLMSLQLRQFGAESFIVNILGISLIRELGPMLAAILVAGRSGSAITAQIGVMRVTEELD 244 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R MG+ L+ PR AL I++PL+ + A+ G + ++ A F Sbjct: 245 AMRVMGIPHGFRLVMPRAVALAIAMPLIAVWTTLCALAGGMLAADIAMNVSPAYFVQALP 304 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + +N+ + K+ I ++ G V ++ SLG+ T VV +I++VII+D+ Sbjct: 305 NAVGFSNLVLAMGKSVVFGVGIALIGCHWGLRVKPNTQSLGEGTTASVVNAITMVIIVDA 364 Query: 363 LFAIFYFAIGI 373 LFAI + +GI Sbjct: 365 LFAIAFKNLGI 375 >gi|120554124|ref|YP_958475.1| hypothetical protein Maqu_1197 [Marinobacter aquaeolei VT8] gi|120323973|gb|ABM18288.1| protein of unknown function DUF140 [Marinobacter aquaeolei VT8] Length = 382 Score = 291 bits (746), Expect = 1e-76, Method: Composition-based stats. Identities = 113/373 (30%), Positives = 191/373 (51%), Gaps = 12/373 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +E G +F+G+W S + ++ + D S + +DT GA L++ Sbjct: 19 AEFGGHTLKFSGDWTLSHYSVLNRQTTALKPRAAACNP---DFSGLGRLDTAGASLMVKL 75 Query: 62 ME--KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 + ++ + L ++ NQ N IGKK+ Sbjct: 76 LGSDALISALQRAELPDEQRALIQAVAEAM-----NQPSAAVATVNPVVAFLAEIGKKVT 130 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 A +G + +++ + + ++ G++ +P+V L++F+ G Sbjct: 131 TLGQLVWLLAGFIGQTLGTLFYILPRPTRWR--ITPFVAALHDTGLNALPIVALLTFLVG 188 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 AV+A GA L FGA I+++DL++ LRE GVLL A+++AGR+ SA A+IG+MK+NE Sbjct: 189 AVVAFLGATVLEDFGATIYTVDLVAFSFLREFGVLLAAILLAGRTASAFTAQIGAMKVNE 248 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DAIRT+GL+ V +L+ PR+ A++ SLP+LT + S ++G ++V DIP + F + Sbjct: 249 ELDAIRTLGLNPVELLVVPRVLAMMFSLPILTFIGMISGMVGGAVVCAVALDIPPSQFIA 308 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 L + GL KAP A I ++ EGF V + S+G+ T+ VVQSI +VI+ Sbjct: 309 IVERDIALKHFLVGLGKAPVFAFLIAVIGCLEGFKVAGSAQSVGEHTTSSVVQSIFMVIL 368 Query: 360 IDSLFAIFYFAIG 372 +DS+ A+F+ +G Sbjct: 369 LDSVAALFFMEMG 381 >gi|218528881|ref|YP_002419697.1| hypothetical protein Mchl_0851 [Methylobacterium chloromethanicum CM4] gi|218521184|gb|ACK81769.1| protein of unknown function DUF140 [Methylobacterium chloromethanicum CM4] Length = 381 Score = 291 bits (746), Expect = 1e-76, Method: Composition-based stats. Identities = 135/374 (36%), Positives = 209/374 (55%), Gaps = 14/374 (3%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + G + G W + + + I ++ +VDLS + +DT+GA ++ Sbjct: 17 LDAGGRVILH--GRWTADQ-GPAVESASARIAAQGRTQPVLVDLSGLARLDTLGAWVLER 73 Query: 61 F---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 +E G++ G L + ++ +P N G++ Sbjct: 74 TRAEIEAAGGRLAYAGARPEHRILLGEMG------LREPEPVPQDTRNPVLRFLDTTGQR 127 Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + N+ S LG V++ G F+ + +L+ Q+ V + GVP+++LISF+ Sbjct: 128 VARGGNEILSGIAFLGEVVAAGGRVARRPQTFR--MAALVNQLEQVALRGVPIIVLISFL 185 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G ++AQQG FQL +FGA+ F ++L+ +L LRE+GVLLT++M+AGRSGSA AEIGSM++ Sbjct: 186 VGGIVAQQGIFQLQRFGAQSFVVNLIGLLILRELGVLLTSIMVAGRSGSAFTAEIGSMRM 245 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EE+DA+R MGLD + ILI PRI AL+I LP+L L + +A+ G + Y + F Sbjct: 246 REEVDALRVMGLDPIEILILPRILALVIGLPILAFLGSLAALAGGGLTAAIYGGMTTDAF 305 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 +R + + + GLIKAPFMA IGI+A EGFAV + SLG+ VT VV+SI +V Sbjct: 306 LARLQAAVSFHHFAVGLIKAPFMALTIGIIATIEGFAVEGSAESLGRHVTASVVKSIFMV 365 Query: 358 IIIDSLFAIFYFAI 371 I++D LFA+F+ AI Sbjct: 366 IVLDGLFAVFFAAI 379 >gi|240137395|ref|YP_002961866.1| putative ABC transporter, permease [Methylobacterium extorquens AM1] gi|240007363|gb|ACS38589.1| Putative ABC transporter, permease [Methylobacterium extorquens AM1] Length = 382 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 136/374 (36%), Positives = 209/374 (55%), Gaps = 13/374 (3%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + G V G W + + + I ++ +VDLS + +DT+GA ++ Sbjct: 17 LDAGGGRVI-LHGRWTADQ-GPAVESASARIAAQGRTQPVLVDLSGLARLDTLGAWVLER 74 Query: 61 F---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 +E G++ G L + ++ +P N G++ Sbjct: 75 TRAEIEAAGGRLAYAGARPEHRILLGEMG------LREPEPVPQDTRNPALRFLDTTGQR 128 Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + N+ S LG V++ G F+ + +L+ Q+ V + GVP+++LISF+ Sbjct: 129 VARGGNEILSGIAFLGEVVAAGGRVARRPQTFR--MAALVNQLEQVALRGVPIIVLISFL 186 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G ++AQQG FQL +FGA+ F ++L+ +L LRE+GVLLT++M+AGRSGSA AEIGSM++ Sbjct: 187 VGGIVAQQGIFQLQRFGAQSFVVNLIGLLILRELGVLLTSIMVAGRSGSAFTAEIGSMRM 246 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EE+DA+R MGLD + ILI PRI AL+I LP+L L + +A+ G + Y + F Sbjct: 247 REEVDALRVMGLDPIEILILPRILALVIGLPILAFLGSLAALAGGGLTAAIYGGMTTDAF 306 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 +R + + + GLIKAPFMA IGI+A EGFAV + SLG+ VT VV+SI +V Sbjct: 307 LARLQAAVSFHHFAVGLIKAPFMALTIGIIATIEGFAVEGSAESLGRHVTASVVKSIFMV 366 Query: 358 IIIDSLFAIFYFAI 371 I++D LFA+F+ AI Sbjct: 367 IVLDGLFAVFFAAI 380 >gi|163850324|ref|YP_001638367.1| hypothetical protein Mext_0891 [Methylobacterium extorquens PA1] gi|254559575|ref|YP_003066670.1| ABC transporter permease [Methylobacterium extorquens DM4] gi|163661929|gb|ABY29296.1| protein of unknown function DUF140 [Methylobacterium extorquens PA1] gi|254266853|emb|CAX22652.1| Putative ABC transporter, permease [Methylobacterium extorquens DM4] Length = 382 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 136/374 (36%), Positives = 209/374 (55%), Gaps = 13/374 (3%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + G V G W + + + I ++ +VDLS + +DT+GA ++ Sbjct: 17 LDAAGGRVI-LHGRWTADQ-GPAVESASARIAAQGRTQPVLVDLSGLARLDTLGAWVLER 74 Query: 61 F---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 +E G++ G L + ++ +P N G++ Sbjct: 75 TRAEIEAAGGRLAYAGARPEHRILLGEMG------LREPEPVPQDTRNPALRFLDTTGQR 128 Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + N+ S LG V++ G F+ + +L+ Q+ V + GVP+++LISF+ Sbjct: 129 VARGGNEILSGIAFLGEVVAAGGRVARRPQTFR--MAALVNQLEQVALRGVPIIVLISFL 186 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G ++AQQG FQL +FGA+ F ++L+ +L LRE+GVLLT++M+AGRSGSA AEIGSM++ Sbjct: 187 VGGIVAQQGIFQLQRFGAQSFVVNLIGLLILRELGVLLTSIMVAGRSGSAFTAEIGSMRM 246 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EE+DA+R MGLD + ILI PRI AL+I LP+L L + +A+ G + Y + F Sbjct: 247 REEVDALRVMGLDPIEILILPRILALVIGLPILAFLGSLAALAGGGLTAAIYGGMTTDAF 306 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 +R + + + GLIKAPFMA IGI+A EGFAV + SLG+ VT VV+SI +V Sbjct: 307 LARLQAAVSFHHFAVGLIKAPFMALTIGIIATIEGFAVEGSAESLGRHVTASVVKSIFMV 366 Query: 358 IIIDSLFAIFYFAI 371 I++D LFA+F+ AI Sbjct: 367 IVLDGLFAVFFAAI 380 >gi|254470335|ref|ZP_05083739.1| ABC transporter permease protein [Pseudovibrio sp. JE062] gi|211960646|gb|EEA95842.1| ABC transporter permease protein [Pseudovibrio sp. JE062] Length = 382 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 133/371 (35%), Positives = 207/371 (55%), Gaps = 5/371 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + + + +G W + ++++ + S+ VDL A++ +DT GA L+ F Sbjct: 16 EDGALLLLTASGAWGIRQ-GATCENLINQVAASLTHSVICVDLKAVSFLDTAGAWLLQRF 74 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + + + E+ L+ R+++ N + S NSF N +G+ + Sbjct: 75 QMEQAEQGREVKFLYEDERFDILLKEVDRQEVDNPTEEHSG--NSFLNYLEAVGEATRQL 132 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 D+ +LG + + + + + + Q + VP+V L+SF+ G + Sbjct: 133 GRDTRDILAMLGSLTATITAAATHPSRLRPISIGV--QFQRSCMGAVPIVCLMSFLIGGI 190 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IAQQG F L QFGAEIF +DL IL LREIGV+LTA+M+AGRSGSA AE+GSMK+ EEI Sbjct: 191 IAQQGGFYLKQFGAEIFVVDLSGILVLREIGVILTAIMVAGRSGSAYTAELGSMKMQEEI 250 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA++ GL +LI PR+ AL+I+LP+L LAN +A+ GA + W Y I F ++ Sbjct: 251 DALQVTGLRVTEVLILPRLVALMIALPILVFLANIAALFGAGLTCWWYLGIVPHSFIAQL 310 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + T+ + G++KAPFMA IG++A EG V S SLG+ T VV+SI +VI++D Sbjct: 311 QAAVTVDTLMVGIVKAPFMALIIGLIACMEGMKVEGSSESLGRHTTVSVVKSIFMVIVVD 370 Query: 362 SLFAIFYFAIG 372 +FA+F+ +IG Sbjct: 371 GVFAVFFASIG 381 >gi|297380678|gb|ADI35565.1| conserved hypothetical protein [Helicobacter pylori v225d] Length = 377 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S VD S ++D + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKVDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + Y + + +GK IV+ Sbjct: 72 KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKEAGKRY---ELMITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 VFSIIFSKLNI 377 >gi|308183565|ref|YP_003927692.1| putative ABC transport system permease protein [Helicobacter pylori PeCan4] gi|308065750|gb|ADO07642.1| putative ABC transport system permease protein [Helicobacter pylori PeCan4] Length = 377 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S +D S +ID + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGSLKMDFSGCQKIDFVFGMFLFDLI 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + Y + + +GK IV+ Sbjct: 72 KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKVGKKY---ELMITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 IFSILFSKLNI 377 >gi|295690462|ref|YP_003594155.1| hypothetical protein Cseg_3097 [Caulobacter segnis ATCC 21756] gi|295432365|gb|ADG11537.1| protein of unknown function DUF140 [Caulobacter segnis ATCC 21756] Length = 386 Score = 290 bits (744), Expect = 2e-76, Method: Composition-based stats. Identities = 107/372 (28%), Positives = 195/372 (52%), Gaps = 11/372 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G +G+W + + + + A++ D+ DL+ + DT GA I+ Sbjct: 26 EQDGRPTAVLSGDWTARGLFDAGLRLAEALD---GVDNPTFDLTGVNRCDTAGAYAILRA 82 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 ++ K + + +L L++ + K + + + F+ L IG+ + Sbjct: 83 ADE-RLKPEDVKARHGVVRLLQLVAAAIQV-----KSEPAVRPSGFRALLERIGRGVFGL 136 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 +D+ S LG +++ G + + ++ G+ +P+V +F GAV Sbjct: 137 FSDAFSTMAFLGHLLTAVGRSIVDPRRIR--WAPIVALCERAGLDAMPIVATTTFFIGAV 194 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A GA L+ FGA+++S++L+ I +RE +L+TA+++AGRS S+ AEIGSMK+N+EI Sbjct: 195 VALLGANMLTDFGAQVYSVELIGISVMREFNILITAILLAGRSASSFAAEIGSMKMNQEI 254 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA++ MG+D L+ PR AL++++P+LT +A + + G +V+W D+ F R Sbjct: 255 DAMQVMGVDPYEALVLPRFAALLLTIPILTFVATIAGLAGGILVVWIVLDLSPNFFLQRI 314 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + + GL KAP MA I + ++G VG +LG++VT VV +I +I+ID Sbjct: 315 VDYVGPTHFWIGLSKAPVMAAVIAAIGCRQGMEVGQDVEALGRRVTAAVVHAIFAIILID 374 Query: 362 SLFAIFYFAIGI 373 ++FA+ Y + I Sbjct: 375 AVFALIYMELDI 386 >gi|120609009|ref|YP_968687.1| hypothetical protein Aave_0306 [Acidovorax citrulli AAC00-1] gi|120587473|gb|ABM30913.1| protein of unknown function DUF140 [Acidovorax citrulli AAC00-1] Length = 375 Score = 290 bits (744), Expect = 2e-76, Method: Composition-based stats. Identities = 93/370 (25%), Positives = 175/370 (47%), Gaps = 12/370 (3%) Query: 6 ITVFRFAGNWKSPEISEI--ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 V G W + ++ +V + ++ DL ++ +D +GA+L+ Sbjct: 16 GPVAALHGRWGAADLGARRTWREVSAQLAQNAPDSGLGWDLRSVDWLDHVGAQLLW---- 71 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + G++ + ++ Q L I +G K++ + Sbjct: 72 NHWGRVWPERIALDDAQRDMLDRVAEFTVIDRPPVPPWRLVEEV----DRLGVKVLHALG 127 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 ++G ++ + G + + + +Y +G + +P+ ++ F+ G V+A Sbjct: 128 HGRHLLELVGQLVIDLGSALRAPR--RAPWRDVSGHLYRMGATALPITAIVGFLIGVVLA 185 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 + QL QFGAE F ++++ I +RE+G +L A+++AGRSGSAI A+IG M++ EE+DA Sbjct: 186 YLMSLQLRQFGAESFIVNILGISLIRELGPMLAAILVAGRSGSAITAQIGVMRVTEELDA 245 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R MG+ L+ PR AL I++PL+ + A+ G + D+ A F + Sbjct: 246 MRVMGIPHGFRLVMPRAVALAIAMPLIAVWTTLCALAGGMLAADIAMDVSPAYFVQALPN 305 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +N+ + K+ I ++ G V ++ SLG+ T VV +I++VII+D+L Sbjct: 306 AVGFSNLVLAMAKSVVFGVGIALIGCHWGLRVKPNTQSLGEGTTASVVNAITMVIIVDAL 365 Query: 364 FAIFYFAIGI 373 FAI + +GI Sbjct: 366 FAIAFKNLGI 375 >gi|159184854|ref|NP_354638.2| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] gi|159140135|gb|AAK87423.2| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] Length = 386 Score = 290 bits (744), Expect = 2e-76, Method: Composition-based stats. Identities = 160/368 (43%), Positives = 226/368 (61%), Gaps = 6/368 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G + + +G+W++ +S I + + I KS + +DLSA+ IDT GA +I + Sbjct: 23 GGGSRYVLSGSWRNSNLSGIFESLDR-IEKSKPASPVDIDLSAVEAIDTTGAWIIQRLRK 81 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 ++ +++ +I K + +P + + IG+ +V+ Sbjct: 82 DLEASGATVTLT-GNDRIEDVIGQLPDKAEMDVEP--VAREGLVERIFAPIGQAVVQNGA 138 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 D + +ILG + +++ Q+ ++GV VP+++L+SF+ GA+IA Sbjct: 139 DFLAGMYILGSAVRGAQMKLGRGR--GVSPAAIVNQIDHMGVRAVPIIMLMSFLIGAIIA 196 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 QQGAFQL FGAE+F +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EEIDA Sbjct: 197 QQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREEIDA 256 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 ++ +GL+ V +L+ PR+ AL I+LPLLTILANF+A+ GA+IV Y I F VF SR H Sbjct: 257 LKVIGLNPVGVLVFPRLVALTIALPLLTILANFAALFGAAIVALAYSGITFEVFLSRLHG 316 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + I G+IKAPFMA IGIVA EG VG + SLGK VT+ VV+SI +VI++D L Sbjct: 317 AVEESTIAAGMIKAPFMALIIGIVAAVEGMKVGGSAESLGKHVTSSVVKSIFVVILVDGL 376 Query: 364 FAIFYFAI 371 FAIFY AI Sbjct: 377 FAIFYAAI 384 >gi|254292866|ref|YP_003058889.1| hypothetical protein Hbal_0490 [Hirschia baltica ATCC 49814] gi|254041397|gb|ACT58192.1| protein of unknown function DUF140 [Hirschia baltica ATCC 49814] Length = 380 Score = 290 bits (744), Expect = 2e-76, Method: Composition-based stats. Identities = 112/373 (30%), Positives = 197/373 (52%), Gaps = 12/373 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G V G W + + I + +K + S +D+S + + DT GA ++ + + Sbjct: 16 GDPVMVLEGAWTAFTVGAIDKPLRQLTSKDV-SKDVSLDVSQLEDFDTAGAYVVDRTLRQ 74 Query: 65 YHGK----IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 K+ G + + L + ++ + +K K + F L +G V Sbjct: 75 LGAPSGSLAKIVGDTHSVISLLTAVNAAKPEPVKKAKDRH-----GFTQLLDRVGHGTVD 129 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + + +G + + K + S++ M G++ +P+V ++SF G Sbjct: 130 ALKEGWGILEFIGEAFTTVFFLLLNPKKIR--WTSVVAIMEEAGLNALPIVSMLSFFIGI 187 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 VIA G L FGA++F+++++ L LRE G++LTA+++AGR+ S+ AEIG+MK+ EE Sbjct: 188 VIAFLGVNLLQSFGAQVFTVEMVGFLMLREFGLVLTAILLAGRTDSSFTAEIGAMKMREE 247 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +DA+R MGL+ + +L++PR+ AL++ P L+ A S ++G +V+W DI A+F R Sbjct: 248 VDAMRVMGLNPMEVLVAPRLIALLVMTPFLSFFAMISGLVGGLLVMWGVMDISPAMFIQR 307 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 T N + G++KAP A I +V ++G V SLG++ T+ VVQ+I +VI+I Sbjct: 308 IQDTVPGQNFWVGIVKAPVFATVIALVGCRQGLLVSGDVQSLGQRTTSSVVQAIFLVIVI 367 Query: 361 DSLFAIFYFAIGI 373 D++FAI Y +G+ Sbjct: 368 DAIFAILYMEMGL 380 >gi|77463402|ref|YP_352906.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gi|77387820|gb|ABA79005.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] Length = 366 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 108/366 (29%), Positives = 194/366 (53%), Gaps = 15/366 (4%) Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK-- 68 G + E + +D++A+ +DT GA ++ ++ Sbjct: 13 LRGRLTIETLPETQRSLGSV------GAGEQIDMAAVEALDTAGAWALLQAQKRAEAAGQ 66 Query: 69 -IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 +++ +S L ++ + + +R + ++G+++ + + S + Sbjct: 67 ALEIVNLSESHRHLLETVAA----AMPEPERRRRTIPGRPDDGLANLGQEVAQGLRGSLT 122 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 G V+++ G + K L L+ M G + VP+V L+ F+ G V+A QG+ Sbjct: 123 SVGFFGEVVTHLGALVLHPTRLK--LTPLVHHMQEAGWNAVPIVSLMGFLIGIVLAFQGS 180 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGAE++ +DL++I LRE+G+LLTA+++AGRS SA A IGSMK+ EEIDA+R + Sbjct: 181 TQLKSFGAEVYVVDLVAISILRELGILLTAIIVAGRSASAFTAAIGSMKMREEIDAMRVL 240 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GLD + L+ PR+ AL+I LP L +A+ + ++G ++ W I +F ++ + + Sbjct: 241 GLDPIDRLVLPRLIALVILLPALGFIASLAGLVGGGLMAWIDLGITPGMFRTQLLADTDV 300 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ GL+KAPF A I ++ +G V ++ SLG + VVQ+I +VI++D+LF+IF Sbjct: 301 SHAIIGLVKAPFFAVIIAVIGCHQGMQVSGNAESLGSHTSRSVVQAIFLVIVVDALFSIF 360 Query: 368 YFAIGI 373 + G+ Sbjct: 361 FAVWGL 366 >gi|114570554|ref|YP_757234.1| hypothetical protein Mmar10_2004 [Maricaulis maris MCS10] gi|114341016|gb|ABI66296.1| protein of unknown function DUF140 [Maricaulis maris MCS10] Length = 384 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 118/375 (31%), Positives = 188/375 (50%), Gaps = 11/375 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 E T+ G+W I D+ + A+ S S +VD+S + +DT GA L+ Sbjct: 18 EEGERTILEPHGDWVIDTIGR-HDNAIRAVEASADPCSIVVDVSHLGRVDTAGAYLLGRA 76 Query: 62 MEKYH---GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 K G + +L + + ++ P F +G I Sbjct: 77 TRKCPTPDADFHFVGQHRTVRRLIEEVRMRTQVCGPDEVPTF-----GFIKALARLGAGI 131 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 ++ G ++ ++F+ L + M VGV+ +P+V ++F Sbjct: 132 EVAYQEAVDTFAFFGKTLTTGLSCFIQPWRFR--LTPTVWAMEEVGVNALPIVATLTFFI 189 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GAV+A GA L FGA +F++DL+ + LRE GVL+TA+M+A RS SA A IG+MK+ Sbjct: 190 GAVVAYMGATLLQSFGASVFTVDLVGLAVLREFGVLITAIMLAARSDSAFTASIGAMKMQ 249 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 +EIDA+R +GLD L+ PR+ A ++ PLLT A + I G +V W DI A+FF Sbjct: 250 QEIDAMRVLGLDPYEALVLPRVVACVLMAPLLTFGAMVAGIFGGMLVAWTAQDISPALFF 309 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 +R HS +++ + G+ KAP + I+ ++G V SLG++VT VVQSI +I Sbjct: 310 TRLHSEIDISHFWVGMSKAPVFGMVVAIIGCRQGMQVQGDVESLGRRVTASVVQSIFAII 369 Query: 359 IIDSLFAIFYFAIGI 373 ++++LFA+ Y + I Sbjct: 370 VLEALFAMMYLELEI 384 >gi|115353001|ref|YP_774840.1| hypothetical protein Bamb_2950 [Burkholderia ambifaria AMMD] gi|115282989|gb|ABI88506.1| protein of unknown function DUF140 [Burkholderia ambifaria AMMD] Length = 374 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 101/366 (27%), Positives = 173/366 (47%), Gaps = 11/366 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R G W + ++ V + + DLS I +D +G + + + G Sbjct: 19 TVRLYGQWTALALARNRGAVARRVAGIASGRVSEWDLSGIERLDHVGGQALW----RVWG 74 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + GV+ Q ++ R + + P+R + L G + F Sbjct: 75 RKLPDGVALSPTQ-RTIFERIERLDSQREAPERVVHFGPITRL----GFMLFAFAEHLQG 129 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + GLVI + +Y G +P+ L++F+ G V++ A Sbjct: 130 GIAMFGLVILDALSVLRRPKTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 187 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M Sbjct: 188 QQLQTFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ LI PR+ AL +++PLL + N A+ G ++ I F + Sbjct: 248 GIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDINYFVRSLPGVVPI 307 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN++ G+ K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI Sbjct: 308 ANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIM 367 Query: 368 YFAIGI 373 + +G+ Sbjct: 368 FQNVGL 373 >gi|325998313|gb|ADZ50521.1| hypothetical protein hp2017_1400 [Helicobacter pylori 2017] Length = 377 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 105/371 (28%), Positives = 182/371 (49%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S +D S +ID + + + Sbjct: 14 DGANSVLILRGDWDFRTSVFRLDELKKNLLDH--QGSLKMDFSGCQKIDFVFGMFLFDLI 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ KK + + Y + + +GK +V+ Sbjct: 72 KERSLNIELCNVSENNACALKVVKDWLVKKNDLESKKAGKKY---ELMITKLGKSLVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + RFH Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRFH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 IFSILFSKLNI 377 >gi|159044594|ref|YP_001533388.1| hypothetical protein Dshi_2050 [Dinoroseobacter shibae DFL 12] gi|157912354|gb|ABV93787.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12] Length = 384 Score = 290 bits (742), Expect = 3e-76, Method: Composition-based stats. Identities = 124/363 (34%), Positives = 206/363 (56%), Gaps = 14/363 (3%) Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK 70 +G+ ++++ + + S +DLS I IDT GA L+ ++ Sbjct: 36 LSGDLTIYGVADLQRQLAAR-----PAGSLTLDLSGIGRIDTAGAWLLAELAR--GEGVR 88 Query: 71 LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAH 130 L G + +L + ++ K + + P+R+ + + +G+++V+ Sbjct: 89 LVGAPDKVARLIANVA-----KAEPEHPERTETPPTLTDRLERLGRQVVEGTKFLGGLTG 143 Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190 +LGLV++ G +F+ + +L+ VG+ VP+V L++F+ G V+A QGA QL Sbjct: 144 MLGLVLARFGRALRHPREFR--MTALVHHCEEVGLRAVPIVALMAFLIGIVLAFQGASQL 201 Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 QFGAE+F +DL+SI LRE+G+LLTA+++AGR+ S+ A IGSMK+ EEIDA+RT+GLD Sbjct: 202 RQFGAEVFVVDLISISILRELGILLTAIIVAGRTASSFTAAIGSMKMREEIDAMRTLGLD 261 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 +L PR+ AL+I LP+L ++AN S ++G +++ W I A+F +R + + Sbjct: 262 PAMLLFLPRVLALLIMLPILGLIANLSGLLGGALMSWIELGISPAMFQTRLIEGTDINHA 321 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 GL+KAPF A IG+V G V ++ SLG+ + VV +I VI+ D+ F+IF+ Sbjct: 322 VVGLVKAPFFAILIGVVGCHAGMQVEGNAESLGRMTSGAVVTAIFAVIVTDAAFSIFFAQ 381 Query: 371 IGI 373 +GI Sbjct: 382 MGI 384 >gi|326388333|ref|ZP_08209929.1| hypothetical protein Y88_3216 [Novosphingobium nitrogenifigens DSM 19370] gi|326207065|gb|EGD57886.1| hypothetical protein Y88_3216 [Novosphingobium nitrogenifigens DSM 19370] Length = 370 Score = 290 bits (742), Expect = 3e-76, Method: Composition-based stats. Identities = 112/371 (30%), Positives = 193/371 (52%), Gaps = 14/371 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ENG T F+G + + + + I++ A +DL+ + +DT+GA Sbjct: 12 GENGDT-LVFSGPMTVATLGGLDARL-----REIETPIARIDLADVPMMDTVGAWTCWRL 65 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 +I H + + K +P ++ + + +G + Sbjct: 66 SRDTGAEI------VHPCEAAERLIGALEKVDDGGEPTQAGGLPVWLRVPAKVGDTVFGL 119 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + G ++ T +F+ +L+ QM VGV+ + +V L+SF+ G V Sbjct: 120 AAGAVEVLGFFGQMLLATWGLLRHPGRFR--FNALVHQMELVGVNALAIVGLMSFLVGIV 177 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IAQQGA QL QFGAE+++++L+ L LRE+G+L+TA+M+AGRSGSA A++G+MK+NEEI Sbjct: 178 IAQQGAVQLRQFGAEVYTVNLVGRLTLRELGILMTAIMVAGRSGSAFAAQLGTMKLNEEI 237 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+RT+G+ + L+ PRI A ++ LP+L + + IIG + + DIPF F +R Sbjct: 238 DAMRTIGVSPMEALVLPRILATVLMLPVLGVYSAVVGIIGGAFLSSLTLDIPFFSFLARI 297 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + +++ GL K P + + +G V ++ +G + T+ VV +I VI++D Sbjct: 298 REVVPVHDVWVGLFKGPVFGLIVSVAGCYQGMQVKANAEEVGLRTTSAVVMAIFTVIVLD 357 Query: 362 SLFAIFYFAIG 372 + FA+F+ +G Sbjct: 358 AFFAVFFTEVG 368 >gi|268678744|ref|YP_003303175.1| hypothetical protein Sdel_0102 [Sulfurospirillum deleyianum DSM 6946] gi|268616775|gb|ACZ11140.1| protein of unknown function DUF140 [Sulfurospirillum deleyianum DSM 6946] Length = 376 Score = 290 bits (742), Expect = 3e-76, Method: Composition-based stats. Identities = 109/373 (29%), Positives = 184/373 (49%), Gaps = 13/373 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + G +V G W + + K S D S+I DT G L+++ Sbjct: 12 NSEGFSVIV-RGKWVKESVPLLQSAFTSLTCK--PHASYTFDFSSIETFDTHGIMLLLHH 68 Query: 62 MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++K + ++ G S + LFS+ + ++ K +R + ++G+ + Sbjct: 69 IKKLEKEYCIVQTTGASDAFKTLFSICQTHYPHEVPRPKKERM-----VLSFLENVGRTM 123 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 ++ S G + G + L + + + G +P+++L SF+ Sbjct: 124 MEGYKTLASFFSFTGELSHAIGALFFKPANIR--LKATLYHIEQSGAGAIPIILLTSFLI 181 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G VIA QGA QL +FGA IF +++++I +RE+ LLTA+++AGRS S+ A+IG MK+ Sbjct: 182 GVVIAYQGASQLEKFGANIFIVEMITISAVRELAPLLTAIVVAGRSASSYTAQIGVMKLT 241 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 +EIDA+ +MG L+ PR++ALIISLPLL A+ + G ++ D+ F F Sbjct: 242 DEIDAMSSMGFSPWNFLVLPRLFALIISLPLLVFFADVVSTFGGMVIASTRLDVSFVEFI 301 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 R T L ++ GL+KAP C I + GF + ++ S+GK T VV +I VI Sbjct: 302 DRIKETVALKHLVIGLVKAPIFGCIIATIGCFRGFQITSNTESVGKYTTISVVNAIFWVI 361 Query: 359 IIDSLFAIFYFAI 371 +D+L ++F + Sbjct: 362 AMDALISVFLTEL 374 >gi|108563874|ref|YP_628190.1| hypothetical protein HPAG1_1449 [Helicobacter pylori HPAG1] gi|107837647|gb|ABF85516.1| ABC transport system permease [Helicobacter pylori HPAG1] Length = 377 Score = 290 bits (742), Expect = 3e-76, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + +D S ++D + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGPLKMDFSGCQKVDFVFGMFLFDLI 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + Y + L +GK IV+ Sbjct: 72 KERSLNIELCNVSENNACALKVVKDWLEKEEDLETKKAGKHY---ELLITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + RFH Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADSFAILGGMFAIKYQLDLGFPSYIDRFH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 VFSIVFSKLNI 377 >gi|15612424|ref|NP_224077.1| hypothetical protein jhp1359 [Helicobacter pylori J99] gi|4155971|gb|AAD06935.1| putative [Helicobacter pylori J99] Length = 377 Score = 290 bits (742), Expect = 3e-76, Method: Composition-based stats. Identities = 103/371 (27%), Positives = 182/371 (49%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S +D S +ID + + + Sbjct: 14 DGANSVLILRGDWDFRTSVFRLDELKKNLLDH--QGSLKMDFSGCQKIDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + Y + + +GK +V+ Sbjct: 72 KERSLNIELCNVSENNACALKVVKDWLEKEDDLESKKAGKKY---ELMITKLGKSLVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F ++ L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CIIPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 IFSILFSKLNI 377 >gi|15646075|ref|NP_208257.1| hypothetical protein HP1466 [Helicobacter pylori 26695] gi|2314643|gb|AAD08507.1| conserved hypothetical integral membrane protein [Helicobacter pylori 26695] Length = 377 Score = 290 bits (742), Expect = 3e-76, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + +D S ++D + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGPLKMDFSGCQKVDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + Y + L +GK IV+ Sbjct: 72 KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKHY---ELLITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + RFH Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRFH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 IFSIIFSKLNI 377 >gi|311232876|gb|ADP85730.1| protein of unknown function DUF140 [Desulfovibrio vulgaris RCH1] Length = 401 Score = 290 bits (742), Expect = 3e-76, Method: Composition-based stats. Identities = 118/367 (32%), Positives = 197/367 (53%), Gaps = 8/367 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + RF+G W + + + + DL+ + +DT GA +I F Sbjct: 42 ILRFSGAWDVATAARARGQL-QHLAIPAECGDLTFDLTGVLRLDTAGALVITTF----RT 96 Query: 68 KIKLQGVSTHIEQLFSLISFTHR-KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 ++ QG++ + + + R I + ++ IG IV+ + Sbjct: 97 ALEKQGIAPLLHCAPAHNALIDRVAAIDMSEAPTVRHASALARTLNAIGASIVEETEQAV 156 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 +G+++ + ++F+ +SL M GV VP+V L+SF+ G V A G Sbjct: 157 GILAFMGMLVISLVGLVLRPWRFR--WVSLCSHMEQTGVQAVPIVALLSFLIGLVTAYMG 214 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A Q ++FGA++F I+L+ I LRE+GVLLTA+++AGRSGS+ A+IG+M NEE+ A+R Sbjct: 215 AEQFARFGAQVFVINLLEISTLREMGVLLTALVVAGRSGSSFTAQIGAMVANEEVSAMRA 274 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +GLD + +L+ PR+ AL++ LP+L +A+ I+G + W I A F +RFH Sbjct: 275 LGLDPIEVLVVPRVLALVVMLPILAFIADIMGILGGGVAAWGTLGIDPANFTARFHEIVH 334 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L N G+IKAPF A I +V +GF V + S+G+ T VV++I +VI++++LFAI Sbjct: 335 LRNFVVGMIKAPFFALVIALVGCFQGFRVTGSAESVGRLTTQAVVEAIFMVIVLNALFAI 394 Query: 367 FYFAIGI 373 + ++G+ Sbjct: 395 LFTSLGV 401 >gi|300312192|ref|YP_003776284.1| organic solvents resistance ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300074977|gb|ADJ64376.1| ABC-type transport system involved in resistance to organic solvents, permease component protein [Herbaspirillum seropedicae SmR1] Length = 380 Score = 289 bits (741), Expect = 4e-76, Method: Composition-based stats. Identities = 108/365 (29%), Positives = 194/365 (53%), Gaps = 4/365 (1%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 V G+W ++ + A + + +++ SA++ DT+GA+L++ + Sbjct: 19 VLHVEGDWTLRNYRALSRQIAQA--RPALGEQTVLEFSALSAFDTVGAKLLVDLLGVPAA 76 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + Q ST +L++ K ++ +G + + Sbjct: 77 LRQTQADSTLAPAWRALLAVVAEAKAIAMPKPAPPRQAWITDMLERVGAATLSLRACALG 136 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +GL + +++ + +++ Q+ G+ VP+V L++F+ GAV+A GA Sbjct: 137 LLGFMGLCLQTLLSSFWRPSRWR--VTAVVAQIEQTGLDAVPIVSLLTFMVGAVVAFLGA 194 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L+ FGA I+++DL++ LRE VLLTA+++AGR+ S+ A+IGSMK NEEIDAIR + Sbjct: 195 TVLANFGASIYTVDLVAFSFLREFAVLLTAILMAGRTASSFTAQIGSMKANEEIDAIRAL 254 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GLD +++L+ PR+ AL++++P LT +A S + G ++V DI +F S + Sbjct: 255 GLDPIKLLVLPRLIALLVAMPALTFIAMLSGLFGGAMVCALSLDISPTMFLSLLQQDVGI 314 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + G++KAP A + ++ EGF V + S+G+ T+ VVQSI +VI++D+L A+F Sbjct: 315 RHFILGMVKAPLFAFVVAVIGCNEGFKVSGSAQSVGQHTTSSVVQSIFVVILLDALAALF 374 Query: 368 YFAIG 372 + +G Sbjct: 375 FMEMG 379 >gi|283957032|ref|ZP_06374504.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 1336] gi|283791533|gb|EFC30330.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 1336] Length = 369 Score = 289 bits (741), Expect = 4e-76, Method: Composition-based stats. Identities = 113/369 (30%), Positives = 186/369 (50%), Gaps = 13/369 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 G W I ++ +A+ IQS I D + IDT G + ++ Sbjct: 11 TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKD 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + KI +G+++ + LF L +++ K +K ++F +GK ++ + Sbjct: 68 KNIKITKEGLNSRFQTLFELCEKNYQRLSKTKKSHKNFS-----EYFIDLGKLSLELLKI 122 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G ++ + F+ ++ + + +P+VIL + + G V+A Sbjct: 123 LRKFINFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q A+QL+QFGA IF +DLM I RE+ L+ A++IAGRS S+ A+IG MKI +EI A+ Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 TMG +I PR+ AL++++PL+ +++ +IIG +V DI FA F RF Sbjct: 241 NTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREA 300 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + +IF GL+KAP IG++A GF V + S+G T VV +I VI D+LF Sbjct: 301 VDIKHIFIGLVKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF 360 Query: 365 AIFYFAIGI 373 ++ + GI Sbjct: 361 SVILTSAGI 369 >gi|217033903|ref|ZP_03439327.1| hypothetical protein HP9810_870g35 [Helicobacter pylori 98-10] gi|216943666|gb|EEC23111.1| hypothetical protein HP9810_870g35 [Helicobacter pylori 98-10] Length = 377 Score = 289 bits (741), Expect = 4e-76, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 179/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + +D S ++D + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGPLKMDFSGCQKVDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + I+L VS + ++ K+ + + Y + L +GK IVK Sbjct: 72 RERSLNIELCNVSENNACALKVVKDWLEKEEDLESKEAGKHY---ELLITKLGKSIVKTY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSAFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 VFSIIFSKLNI 377 >gi|172061853|ref|YP_001809505.1| hypothetical protein BamMC406_2812 [Burkholderia ambifaria MC40-6] gi|171994370|gb|ACB65289.1| protein of unknown function DUF140 [Burkholderia ambifaria MC40-6] Length = 374 Score = 289 bits (741), Expect = 4e-76, Method: Composition-based stats. Identities = 101/366 (27%), Positives = 173/366 (47%), Gaps = 11/366 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R G W + ++ V + + DLS I +D +G + + + G Sbjct: 19 TVRLYGQWTALALARNRGAVARRVAGIASGRVSEWDLSGIERLDHVGGQALW----RVWG 74 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + GV+ Q ++ R + + P+R + L G + F Sbjct: 75 RKLPDGVALSTTQ-RTIFERIERLDSQREAPERVVHFGPITRL----GFMLFAFAEHLQG 129 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + GLVI + +Y G +P+ L++F+ G V++ A Sbjct: 130 GIAMFGLVILDALSVLRRPKTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 187 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M Sbjct: 188 QQLQTFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ LI PR+ AL +++PLL + N A+ G ++ I F + Sbjct: 248 GIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDINYFVRSLPGVVPI 307 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN++ G+ K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI Sbjct: 308 ANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIM 367 Query: 368 YFAIGI 373 + +G+ Sbjct: 368 FQNVGL 373 >gi|317010161|gb|ADU80741.1| putative ABC transport system permease protein [Helicobacter pylori India7] Length = 377 Score = 289 bits (741), Expect = 4e-76, Method: Composition-based stats. Identities = 102/371 (27%), Positives = 181/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + +D S ++D + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGPLKMDFSGCQKVDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + Y + + +GK IV+ Sbjct: 72 KERSLNIELCNVSENNACALKVVKDWLEKEEDLESEKAGKKY---ELMITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL + GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQEMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAINYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 VFSIIFSKLNI 377 >gi|194364302|ref|YP_002026912.1| hypothetical protein Smal_0524 [Stenotrophomonas maltophilia R551-3] gi|194347106|gb|ACF50229.1| protein of unknown function DUF140 [Stenotrophomonas maltophilia R551-3] Length = 373 Score = 289 bits (739), Expect = 6e-76, Method: Composition-based stats. Identities = 114/364 (31%), Positives = 194/364 (53%), Gaps = 13/364 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + R +G W + A +V+ + ++ +D + I ++D+ G ++ + Sbjct: 21 LIRLSGTWTLKT-ALAAAEVLRDVPDTLTG----IDATGIEKMDSAGVLQVLRVAHRADL 75 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + +L+ KP+R F +G + ++ + Sbjct: 76 GEDALQFRPDHQ---ALVCTIEEVADDRPKPKRDF---GVLAALERLGVSVHATGHNIKA 129 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 LG + +F+ L + + QM VG+ VP+V L+S++ GAVIA G+ Sbjct: 130 LCSFLGENLVKAARLVKEPRRFR--LTATVHQMEQVGLDAVPLVALLSYLVGAVIAFLGS 187 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L FGAEI+ ++L++I LRE VLLTA+++AGR+ SA A+IG+MK EEIDA+RT+ Sbjct: 188 TILRDFGAEIYVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKAREEIDAMRTL 247 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GLD + +L+ PR++AL+++LPLLT +A + + G V DIP ++ +R H T + Sbjct: 248 GLDPIDLLVLPRLFALLVTLPLLTFIAMVAGLAGGITVGAFDLDIPPQMYIARMHDTMEV 307 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VIIID+ A++ Sbjct: 308 RHMLVGLSKAPVFALVIGLIGCLEGLKVEGTAQSVGERTTSSVVQTISLVIIIDAFAALW 367 Query: 368 YFAI 371 + + Sbjct: 368 FMHM 371 >gi|170748370|ref|YP_001754630.1| hypothetical protein Mrad2831_1952 [Methylobacterium radiotolerans JCM 2831] gi|170654892|gb|ACB23947.1| protein of unknown function DUF140 [Methylobacterium radiotolerans JCM 2831] Length = 384 Score = 289 bits (739), Expect = 6e-76, Method: Composition-based stats. Identities = 138/374 (36%), Positives = 217/374 (58%), Gaps = 16/374 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S +G G W + + + + I + ++ VDLS I +DT+GA ++ Sbjct: 21 SADGR--LALDGRWTADQ-APTVEAAAARIAAAGRAGPVAVDLSGIERLDTLGAWVL--- 74 Query: 62 MEKYHGKIKLQGVSTHI----EQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 E+ +I+ G + + L+ ++ P+R + L G++ Sbjct: 75 -ERTRAEIEQAGSALTYLGARPEHRILLGEVRLREPDAPPPRR---HGPVVGLLDATGRR 130 Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 V+ ++ + LG +I+ G F+G +LI Q+ V ++G P+++LISF+ Sbjct: 131 TVQGGHEFVTALAFLGELIAACGRVALRPGTFRGN--ALINQIQQVALNGTPIIVLISFL 188 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G ++AQQG FQL +FGA+ F ++L+ +L LRE+GVLLT++M+AGRSGSAI AEIGSM++ Sbjct: 189 VGGIVAQQGIFQLQRFGAQTFVVNLIGLLILREMGVLLTSIMVAGRSGSAITAEIGSMRM 248 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EE+DA+R MGLD V ILI PR+ AL+I LP+LT++ + +A+ G + Y + F Sbjct: 249 REEVDALRVMGLDPVEILIVPRVLALMIGLPMLTLIGDLAALAGGGLTAMLYGGLTLDQF 308 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 R + + ++ GLIKAPFMA IG++A EGFAV + SLG+ VT VV+SI +V Sbjct: 309 LVRLQAAVGVHHVMVGLIKAPFMALTIGVIATIEGFAVEGSAESLGRHVTASVVKSIFMV 368 Query: 358 IIIDSLFAIFYFAI 371 I++D LFA+F+ AI Sbjct: 369 IVLDGLFAVFFAAI 382 >gi|126462257|ref|YP_001043371.1| hypothetical protein Rsph17029_1489 [Rhodobacter sphaeroides ATCC 17029] gi|126103921|gb|ABN76599.1| protein of unknown function DUF140 [Rhodobacter sphaeroides ATCC 17029] Length = 366 Score = 289 bits (739), Expect = 6e-76, Method: Composition-based stats. Identities = 109/366 (29%), Positives = 194/366 (53%), Gaps = 15/366 (4%) Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK-- 68 G + E + +D++A+ +DT GA I+ ++ Sbjct: 13 LRGRLTIETLPETQRSLGSV------GAGGQIDMAAVEALDTAGAWAILQAQKRAEAAGQ 66 Query: 69 -IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 +++ +S L ++ + + +R + ++G+++ + + S + Sbjct: 67 ALEIVNLSESHRHLLETVAA----AMPEPERRRRTIPGRPDDGLANLGQEVAQGLRGSLT 122 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 G V+++ G + K L L+ M G + VP+V L+ F+ G V+A QG+ Sbjct: 123 SVGFFGEVVAHLGALVLHPTRLK--LTPLVHHMQEAGWNAVPIVSLMGFLIGIVLAFQGS 180 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGAE++ +DL++I LRE+G+LLTA+++AGRS SA A IGSMK+ EEIDA+R + Sbjct: 181 TQLKSFGAEVYVVDLVAISILRELGILLTAIIVAGRSASAFTAAIGSMKMREEIDAMRVL 240 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GLD + L+ PR+ AL+I LP L +A+ + ++G ++ W I +F ++ + + Sbjct: 241 GLDPIDRLVLPRLIALVILLPALGFIASLAGLVGGGLMAWIDLGITPGMFRTQLLADTDV 300 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ GL+KAPF A I ++ +G V ++ SLG + VVQ+I +VI++D+LF+IF Sbjct: 301 SHAIIGLVKAPFFAVIIAVIGCHQGMQVSGNAESLGSHTSRSVVQAIFLVIVVDALFSIF 360 Query: 368 YFAIGI 373 + G+ Sbjct: 361 FAVWGL 366 >gi|46579026|ref|YP_009834.1| STAS domain-containing protein [Desulfovibrio vulgaris str. Hildenborough] gi|46448439|gb|AAS95093.1| STAS domain protein [Desulfovibrio vulgaris str. Hildenborough] Length = 406 Score = 289 bits (739), Expect = 6e-76, Method: Composition-based stats. Identities = 118/367 (32%), Positives = 197/367 (53%), Gaps = 8/367 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + RF+G W + + + + DL+ + +DT GA +I F Sbjct: 47 ILRFSGAWDVATAARARGQL-QHLAIPAECGDLTFDLTGVLRLDTAGALVITTF----RT 101 Query: 68 KIKLQGVSTHIEQLFSLISFTHR-KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 ++ QG++ + + + R I + ++ IG IV+ + Sbjct: 102 ALEKQGIAPLLHCAPAHNALIDRVAAIDMSEAPTVRHASALARTLNAIGASIVEETEQAV 161 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 +G+++ + ++F+ +SL M GV VP+V L+SF+ G V A G Sbjct: 162 GILAFMGMLVISLVGLVLRPWRFR--WVSLCSHMEQTGVQAVPIVALLSFLIGLVTAYMG 219 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A Q ++FGA++F I+L+ I LRE+GVLLTA+++AGRSGS+ A+IG+M NEE+ A+R Sbjct: 220 AEQFARFGAQVFVINLLEISTLREMGVLLTALVVAGRSGSSFTAQIGAMVANEEVSAMRA 279 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +GLD + +L+ PR+ AL++ LP+L +A+ I+G + W I A F +RFH Sbjct: 280 LGLDPIEVLVVPRVLALVVMLPILAFIADIMGILGGGVAAWGTLGIDPANFTARFHEIVH 339 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L N G+IKAPF A I +V +GF V + S+G+ T VV++I +VI++++LFAI Sbjct: 340 LRNFVVGMIKAPFFALVIALVGCFQGFRVTGSAESVGRLTTQAVVEAIFMVIVLNALFAI 399 Query: 367 FYFAIGI 373 + ++G+ Sbjct: 400 LFTSLGV 406 >gi|90417915|ref|ZP_01225827.1| possible permease protein, ABC-type transporter [Aurantimonas manganoxydans SI85-9A1] gi|90337587|gb|EAS51238.1| possible permease protein, ABC-type transporter [Aurantimonas manganoxydans SI85-9A1] Length = 377 Score = 289 bits (739), Expect = 6e-76, Method: Composition-based stats. Identities = 141/374 (37%), Positives = 221/374 (59%), Gaps = 9/374 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +G V R +G+W + + + D V A + +VD + IDT GA L+ + Sbjct: 10 RDGGLVLRASGDWLARTVGSVEDTVAEAGAADL-GRQVVVDCGDVARIDTAGALLLEKLV 68 Query: 63 EKYHG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 ++L+ VS + LF ++ ++ + ++ N +L G+ V Sbjct: 69 RGLGANGRDVRLEAVSERDQPLFDVVRKALDRERPQPEKRK---TNRILDLVAATGRGSV 125 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 ++ +I+G + + + + ++ Q+ +G+ VP++ L+SF+ G Sbjct: 126 AVKDEIVVALNIIGGAMVGGVQRLTGKTQIRP--AAIFAQVEQMGLRAVPIIFLMSFLIG 183 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 A+IAQQGAFQL +FG E+++++L +IL LREIGVLLTA+MIAGRSGSAI AEIGSMK+ E Sbjct: 184 AIIAQQGAFQLRRFGGELYAVNLAAILILREIGVLLTAIMIAGRSGSAITAEIGSMKMRE 243 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDA+ +GL+ + +L+ PR+ AL+I LPLL +AN + ++GA + + Y DI FA F Sbjct: 244 EIDALHVIGLNPIGVLVFPRLVALVIVLPLLAFIANLAGLLGAMLTLNIYSDISFASFGQ 303 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 + + +F+G+IKAPFMA IG++A EG VG + SLG +VT VV+SI +VI+ Sbjct: 304 GVQYSVDMFTVFSGVIKAPFMAVMIGLIASAEGMKVGGSAESLGLRVTASVVKSIFLVIL 363 Query: 360 IDSLFAIFYFAIGI 373 +D LFAIFY +IG+ Sbjct: 364 MDGLFAIFYASIGL 377 >gi|221069470|ref|ZP_03545575.1| protein of unknown function DUF140 [Comamonas testosteroni KF-1] gi|220714493|gb|EED69861.1| protein of unknown function DUF140 [Comamonas testosteroni KF-1] Length = 375 Score = 289 bits (739), Expect = 6e-76, Method: Composition-based stats. Identities = 98/371 (26%), Positives = 178/371 (47%), Gaps = 10/371 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S +G G W + E+ + +A DL + +D IGA+L+ Sbjct: 14 SRDGQQWAVPVGRWSAAELGDRHIWRRLAPQIRAVPKGVAWDLQQMVWLDHIGAQLLWEQ 73 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + L + + + ++ ++ KP+ S + L G+ ++ Sbjct: 74 WGRTWPARLLT--TKNQRSMLERVA--RFSEVPEAKPEPSGWMCEVNRL----GQMVIDA 125 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + ++G ++ + + F+G + +Y G + +P+ L+ F+ G V Sbjct: 126 CGHFSNLIQLVGQLLLDCLRLLRNP--FRGPWRDISGHLYATGATALPITALVGFLIGVV 183 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A A QL QFGAE F ++++ I +RE+G LL A+++AGRSGSAI A+IG M++ EE+ Sbjct: 184 LAYLMALQLRQFGAESFIVNILGISLIRELGPLLAAILVAGRSGSAITAQIGVMRVTEEL 243 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA++ MG+ L+ PR AL +S+PL+ + +A+ G + DI + F Sbjct: 244 DAMQVMGISQGYRLVLPRALALAVSMPLVALWTILAALAGGMVAADLTMDITPSYFIQSL 303 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + + N+ + K+ I ++ G V ++ SLG+ T VV SI++VII+D Sbjct: 304 PAAVKIGNLVLAMGKSVVFGVLIALIGCHWGLKVEPNTQSLGRGTTAAVVSSITMVIIVD 363 Query: 362 SLFAIFYFAIG 372 ++FAI + +G Sbjct: 364 AIFAILFRNVG 374 >gi|210135633|ref|YP_002302072.1| ABC transporter permease protein [Helicobacter pylori P12] gi|210133601|gb|ACJ08592.1| ABC transporter permease protein [Helicobacter pylori P12] Length = 377 Score = 289 bits (739), Expect = 7e-76, Method: Composition-based stats. Identities = 103/371 (27%), Positives = 179/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + +D S ++D + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGPLKMDFSGCQKVDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + I+L VS + ++ K+ + + Y + L +GK IV+ Sbjct: 72 RERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKHY---ELLITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 VFSIVFSKLNI 377 >gi|120603385|ref|YP_967785.1| hypothetical protein Dvul_2342 [Desulfovibrio vulgaris DP4] gi|120563614|gb|ABM29358.1| protein of unknown function DUF140 [Desulfovibrio vulgaris DP4] Length = 406 Score = 289 bits (739), Expect = 7e-76, Method: Composition-based stats. Identities = 118/367 (32%), Positives = 196/367 (53%), Gaps = 8/367 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + RF+G W + + + + DL+ + +DT GA +I F Sbjct: 47 ILRFSGAWDVATAARARGQL-QHLAIPAECGDLTFDLTGVLRLDTAGALVITTF----RT 101 Query: 68 KIKLQGVSTHIEQLFSLISFTHR-KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 ++ QG++ + + + R I + ++ IG IV+ + Sbjct: 102 ALEKQGIAPLLHCAPAHNALIDRVAAIDMSEAPTVRHASALARTLNAIGASIVEETEQAV 161 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 +G+ + + ++F+ +SL M GV VP+V L+SF+ G V A G Sbjct: 162 GILAFMGMFVISLVGLVLRPWRFR--WVSLCSHMEQTGVQAVPIVALLSFLIGLVTAYMG 219 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A Q ++FGA++F I+L+ I LRE+GVLLTA+++AGRSGS+ A+IG+M NEE+ A+R Sbjct: 220 AEQFARFGAQVFVINLLEISTLREMGVLLTALVVAGRSGSSFTAQIGAMVANEEVSAMRA 279 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +GLD + +L+ PR+ AL++ LP+L +A+ I+G + W I A F +RFH Sbjct: 280 LGLDPIEVLVVPRVLALVVMLPILAFIADIMGILGGGVAAWGTLGIDPANFTARFHEIVQ 339 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L N G+IKAPF A I +V +GF V + S+G+ T VV++I +VI++++LFAI Sbjct: 340 LRNFVVGMIKAPFFALVIALVGCFQGFRVTGSAESVGRLTTQAVVEAIFMVIVLNALFAI 399 Query: 367 FYFAIGI 373 + ++G+ Sbjct: 400 LFTSLGV 406 >gi|325293034|ref|YP_004278898.1| ABC transporter transmembrane protein [Agrobacterium sp. H13-3] gi|325060887|gb|ADY64578.1| ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 386 Score = 288 bits (738), Expect = 7e-76, Method: Composition-based stats. Identities = 163/368 (44%), Positives = 223/368 (60%), Gaps = 6/368 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G + +G+W++ +S I + I KS + +DLS++ IDT GA +I E Sbjct: 23 GGGQRYALSGSWRNSNLSGIFARLEN-IEKSGPAGPVEIDLSSVEAIDTTGAWVIRRLRE 81 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 K ++ E++ LI K +P + IG+ +V+ Sbjct: 82 DMEAKGVTVTLT-GNERIEDLIGQLPDKAAMEGEP--VAKVGLAERFFSPIGQAVVQNGA 138 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 D + +ILG + +++ Q+ ++GV VP+++L+SF+ GA+IA Sbjct: 139 DFLAGMYILGSAVRGAQMKLGRGR--GVSPAAIVNQIDHMGVRAVPIIMLMSFLIGAIIA 196 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 QQGAFQL FGAE+F +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EEIDA Sbjct: 197 QQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREEIDA 256 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 ++ +GL+ V +L+ PR+ AL I+LPLLTILANF+A+ GA+IV Y I F VF SR H Sbjct: 257 LKVIGLNPVGVLVFPRLVALTIALPLLTILANFAALFGAAIVTLLYSGITFEVFLSRLHG 316 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + I G+IKAPFMA IGIVA EG VG + SLGK VT+ VV+SI +VI++D L Sbjct: 317 AVEESTIAAGMIKAPFMALIIGIVAAVEGMKVGGSAESLGKHVTSSVVKSIFVVILVDGL 376 Query: 364 FAIFYFAI 371 FAIFY AI Sbjct: 377 FAIFYAAI 384 >gi|254779978|ref|YP_003058085.1| ABC-type transport system, permease; putative membrane protein [Helicobacter pylori B38] gi|254001891|emb|CAX30141.1| ABC-type transport system, permease; putative membrane protein [Helicobacter pylori B38] Length = 377 Score = 288 bits (738), Expect = 9e-76, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 180/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + +D S ++D + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGPLKMDFSGCQKVDFVFGMFLFDLI 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + +I K+ + + Y + L +GK IV+ Sbjct: 72 KERSLNIELCNVSENNACALKVIKDWLEKEEDLESKKAGKHY---ELLITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QG QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGTLQLQDMGAPLVSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + RFH Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRFH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 IFSIVFSKLNI 377 >gi|116051201|ref|YP_789968.1| putative permease of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|218890596|ref|YP_002439460.1| putative permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254236173|ref|ZP_04929496.1| hypothetical protein PACG_02138 [Pseudomonas aeruginosa C3719] gi|254241899|ref|ZP_04935221.1| hypothetical protein PA2G_02620 [Pseudomonas aeruginosa 2192] gi|115586422|gb|ABJ12437.1| putative permease of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|126168104|gb|EAZ53615.1| hypothetical protein PACG_02138 [Pseudomonas aeruginosa C3719] gi|126195277|gb|EAZ59340.1| hypothetical protein PA2G_02620 [Pseudomonas aeruginosa 2192] gi|218770819|emb|CAW26584.1| probable permease of ABC transporter [Pseudomonas aeruginosa LESB58] Length = 381 Score = 288 bits (738), Expect = 9e-76, Method: Composition-based stats. Identities = 114/364 (31%), Positives = 186/364 (51%), Gaps = 4/364 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G+W + + +V +S + +A DLS + +DT GA L+ + Sbjct: 21 VRAIGDWTLAHYTALEREVTRL--RSEVAGNASFDLSQLGALDTAGAALLAELLGAERLA 78 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + + +L+ +P++ + L IG + F + Sbjct: 79 DLAELEPGLPRERQALLKTVGHALHDFCEPEKPKPPTTAIELLARIGCAMETFWLHLKAL 138 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +GL + ++ + L+ + G+ VP++ L++F+ GAVIA GA Sbjct: 139 LGFIGLTLETLFRSLVRPASWR--VTPLVANIEKSGLDAVPIIALLTFLVGAVIAFLGAT 196 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L+ FGA I++++L+ LRE VLLTA+++AGR+ SA A+IGSMK NEEIDAIR +G Sbjct: 197 VLANFGATIYTVNLVVFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRALG 256 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 L+ + +L+ PR+ AL++SLP+LT + I+G V DIP A+F S + Sbjct: 257 LNPIELLVLPRVLALLVSLPMLTFVGMLCGIVGGMTVCAWTLDIPPAMFLSIMEDGIGVQ 316 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + G+ KAP A I ++ EGF V + S+G+ TT VV SI +VI++D+L A+F+ Sbjct: 317 HFLVGISKAPLFAFLIAVIGCLEGFKVSGSAQSVGEHTTTSVVHSIFVVILLDALAALFF 376 Query: 369 FAIG 372 +G Sbjct: 377 MEMG 380 >gi|298735565|ref|YP_003728086.1| putative ABC transport system permease protein [Helicobacter pylori B8] gi|298354750|emb|CBI65622.1| putative ABC transport system permease protein [Helicobacter pylori B8] Length = 377 Score = 288 bits (738), Expect = 9e-76, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 182/371 (49%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S +D S ++D + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGSLKMDFSGCQKVDFVFGMFLFDLI 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + Y + L +GK IV+ Sbjct: 72 KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKKY---ELLITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QG QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGVLQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F+ + RFH Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFSSYIDRFH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 VFSIVFSKLNI 377 >gi|160895814|ref|YP_001561396.1| hypothetical protein Daci_0365 [Delftia acidovorans SPH-1] gi|160361398|gb|ABX33011.1| protein of unknown function DUF140 [Delftia acidovorans SPH-1] Length = 376 Score = 288 bits (738), Expect = 9e-76, Method: Composition-based stats. Identities = 95/364 (26%), Positives = 176/364 (48%), Gaps = 11/364 (3%) Query: 11 FAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 G+W + E+ A + A + D +L + +D +GA+L+ + G+ Sbjct: 23 LTGSWGAAELGRRAQWRKLRAQLADAKGDDLGWNLEGLDWLDHVGAQLLW----NHWGRR 78 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 ++ Q L K P R +G ++ Sbjct: 79 LPARLAASDAQRAMLERVGRFSKEPAPPPPRLNLLERI----DSLGCLVINACGHFAQMT 134 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 ++G ++ + F + + +G + +Y +G + +P+ L+ F+ G V+A A Q Sbjct: 135 RLIGQLLIDLLRFARAPH--RGPWRDISGHLYSMGATALPITALVGFLIGVVLAYLMALQ 192 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L QFGAE F ++++ I +RE+G LL A+++AGR+GSAI A+IG M++ EE+DA++ MG+ Sbjct: 193 LRQFGAESFIVNILGISLIRELGPLLAAILVAGRTGSAITAQIGVMRVTEELDAMQVMGI 252 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 L+ PR AL I++PL+++ +A+ G + + A F + + N Sbjct: 253 PHGFRLVLPRALALAIAMPLVSLWTTLAALAGGMLAADLTMGVTGAYFAEALPAAVKIGN 312 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 ++ + K+ I ++ G V ++ SLGK T VV +I++VI++D++FAI + Sbjct: 313 LWIAMGKSVVFGALIALIGCHWGLRVEPNTQSLGKGTTASVVTAITMVIVVDAIFAILFK 372 Query: 370 AIGI 373 +GI Sbjct: 373 DVGI 376 >gi|94263506|ref|ZP_01287318.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|93456144|gb|EAT06287.1| conserved hypothetical protein [delta proteobacterium MLMS-1] Length = 379 Score = 288 bits (738), Expect = 9e-76, Method: Composition-based stats. Identities = 97/375 (25%), Positives = 183/375 (48%), Gaps = 17/375 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59 S +GI G ++ I + ++ + K+ ++D+ + +D G L++ Sbjct: 19 SADGILHAVVRGRMEAGSIGPLWQELASKLKKTRAG--LVLDVEKVDYLDMSGQALLLHF 76 Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 M+ + ++++G+ + I + Q+ + +G+ Sbjct: 77 SRLMQDSNRPVEVRGLRPDFRHIQEQIDCFDYRPKPLQR---------RLSAVEELGRAA 127 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 V D +G +S+ A + ++ M VG V ++ L+ F+ Sbjct: 128 VNLGRDIGQFFSFVGEFVSSLAYCLAHPGTVR--WKDVLSHMENVGGRAVFIIALMGFLI 185 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G +IA Q A L FGAE+F L+ + +RE+G L+TA+++AGRSGSA AEIG+MK N Sbjct: 186 GVIIAFQTAITLKTFGAEMFVAKLLGLSMVRELGPLVTAIILAGRSGSAFAAEIGTMKTN 245 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEI+A++TMGL+ VR L+ PR+ A ++ PLL + + IG ++V+ D + Sbjct: 246 EEINALQTMGLNPVRFLVVPRMLATMLVTPLLCVFFLLFSFIGGALVM-LSMDFTLNSYV 304 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + ++ +A+ G++K + + V G G ++++G+ T+ VV +I ++I Sbjct: 305 HQLSTSVGMADFLGGMVKVLVFSILVAWVGCVRGLQTGSGASAVGRSTTSAVVSAIILII 364 Query: 359 IIDSLFAIFYFAIGI 373 + D +FA+ Y+ +GI Sbjct: 365 LADGIFAVVYYMLGI 379 >gi|148560485|ref|YP_001258960.1| putative toulene ABC transporter permease [Brucella ovis ATCC 25840] gi|148371742|gb|ABQ61721.1| putative toulene ABC transporter, permease protein [Brucella ovis ATCC 25840] Length = 365 Score = 288 bits (737), Expect = 1e-75, Method: Composition-based stats. Identities = 156/367 (42%), Positives = 225/367 (61%), Gaps = 9/367 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI ++ Sbjct: 3 VIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLRQRLAA 61 Query: 68 K---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 K ++L+GV L + + + + + FF+ +F N+ +G ++ ND Sbjct: 62 KHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNV---LGGAVISMFND 118 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 HILG I G + +++ QM +GV +P+++L+S + GA+IAQ Sbjct: 119 FKMAMHILGATIR--GAQLKYGRGNGIPIAAIVTQMDRMGVGAIPIIVLMSTIVGAIIAQ 176 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEI SMK+ EE DA+ Sbjct: 177 QGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEISSMKMREETDAL 236 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F SR H Sbjct: 237 TVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISRLHDA 296 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI++D LF Sbjct: 297 VALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDGLF 356 Query: 365 AIFYFAI 371 A+FY AI Sbjct: 357 AMFYAAI 363 >gi|207091861|ref|ZP_03239648.1| hypothetical protein HpylHP_01931 [Helicobacter pylori HPKX_438_AG0C1] Length = 377 Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S +D S ++D + + + Sbjct: 14 DGADSVLILRGDWDFKTSVFRLDELKKNLLDH--QGSLKMDFSGCQKVDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + Y + L +GK IV+ Sbjct: 72 KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKHY---ELLITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 VFSIVFSKLNI 377 >gi|152984282|ref|YP_001347296.1| ABC transporter permease [Pseudomonas aeruginosa PA7] gi|150959440|gb|ABR81465.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7] Length = 381 Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 114/364 (31%), Positives = 185/364 (50%), Gaps = 4/364 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G+W + + +V +S + A DLS + +DT GA L+ + Sbjct: 21 VRAIGDWTLAHYTALEREVTRL--RSQVAGDASFDLSQLGALDTAGAALLAELLGAERLA 78 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + + +L+ +P++ + L IG + F + Sbjct: 79 DLAELEPGLPRERQALLKTVGHALHDFCEPEKPKPPTTAIELLARIGCAMETFWLHLKAL 138 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +GL + ++ + L+ + G+ VP++ L++F+ GAVIA GA Sbjct: 139 LGFIGLTLETLLRSLVRPASWR--VTPLVANIEKSGLDAVPIIALLTFLVGAVIAFLGAT 196 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L+ FGA I++++L+ LRE VLLTA+++AGR+ SA A+IGSMK NEEIDAIR +G Sbjct: 197 VLANFGATIYTVNLVVFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRALG 256 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 L+ + +L+ PR+ AL++SLP+LT + I+G V DIP A+F S + Sbjct: 257 LNPIELLVLPRVLALLVSLPMLTFVGMLCGIVGGMTVCAWSLDIPPAMFLSIMEDGIGVQ 316 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + G+ KAP A I ++ EGF V + S+G+ TT VV SI +VI++D+L A+F+ Sbjct: 317 HFLVGISKAPLFAFLIAVIGCLEGFKVSGSAQSVGEHTTTSVVHSIFVVILLDALAALFF 376 Query: 369 FAIG 372 +G Sbjct: 377 MEMG 380 >gi|84516868|ref|ZP_01004226.1| ABC transporter, inner membrane subunit [Loktanella vestfoldensis SKA53] gi|84509336|gb|EAQ05795.1| ABC transporter, inner membrane subunit [Loktanella vestfoldensis SKA53] Length = 380 Score = 287 bits (736), Expect = 2e-75, Method: Composition-based stats. Identities = 124/373 (33%), Positives = 199/373 (53%), Gaps = 13/373 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++ G + DV+ S + +VD++ ++ +DT GA ++ Sbjct: 19 DSDGARLSVQGRLTIDSFEHLDRDVI----AQQASRAEVVDIAQLSHMDTAGAWFLLDLA 74 Query: 63 EKYHGKIK--LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 + + G S L + K KP + +G+++ Sbjct: 75 GRTSAGAASVITGASDAQTLLIEAVRTNLPPKAAGAKPAVR-----LVDHFETLGRRVAL 129 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + + LG VI+ + L S++ VG+ VP+V L++F+ G Sbjct: 130 AGSHALEMLSFLGQVIAAMARVIRHPRALR--LTSVVHHCQQVGLQAVPIVALMAFLIGV 187 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A QG+ QL QFGAE+F +DL++I LRE+G+LLTA+++AGRSGSA A IGSMK+ EE Sbjct: 188 VLAFQGSAQLRQFGAEVFVVDLIAISILRELGILLTAIIVAGRSGSAFTAAIGSMKMREE 247 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+RT+GLD V IL+ PR+ AL++ LP L ++AN S + G +++ W D+ AVF +R Sbjct: 248 IDAMRTLGLDPVAILVVPRVLALVLMLPALGLIANVSGLFGGALMSWIELDVSPAVFQAR 307 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 S + + G+IKAP A IGI+ +G VG + SLG++ + VV +I +VI+ Sbjct: 308 LVSNTDVWHFNVGMIKAPVFALIIGIIGCYQGMKVGGDAESLGRQTSASVVMAIFMVIVA 367 Query: 361 DSLFAIFYFAIGI 373 D+LF+IF+ +G+ Sbjct: 368 DALFSIFFAIVGV 380 >gi|208435334|ref|YP_002267000.1| ABC transport system permease [Helicobacter pylori G27] gi|208433263|gb|ACI28134.1| ABC transport system permease [Helicobacter pylori G27] Length = 377 Score = 287 bits (736), Expect = 2e-75, Method: Composition-based stats. Identities = 103/371 (27%), Positives = 181/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S +D S ++D + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGSLKMDFSGCQKVDFVFGMFLFDLI 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + Y + + +GK IV+ Sbjct: 72 KERSLSIELCNVSENNACALKVVKDWLEKEEDLESKKAGKKY---ELMITKLGKSIVETC 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 IFSILFSKLNI 377 >gi|86149247|ref|ZP_01067478.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|88596442|ref|ZP_01099679.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|218563235|ref|YP_002345015.1| putative ABC transporter permease [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85840029|gb|EAQ57287.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|88191283|gb|EAQ95255.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|112360942|emb|CAL35743.1| putative ABC transport system permease [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926840|gb|ADC29192.1| putative ABC transport system permease [Campylobacter jejuni subsp. jejuni IA3902] gi|315929480|gb|EFV08676.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 305] Length = 369 Score = 287 bits (736), Expect = 2e-75, Method: Composition-based stats. Identities = 112/369 (30%), Positives = 185/369 (50%), Gaps = 13/369 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 G W I ++ +A+ IQS I D + IDT G + ++ Sbjct: 11 TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKN 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + KI +G+++ + LF L +++ K +K ++F +GK ++ + Sbjct: 68 KNIKITKEGLNSRFQTLFELCEKNYQRLGKTKKSHQNFS-----EYFIDLGKLSLELLKI 122 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G ++ + F+ ++ + + +P+VIL + + G V+A Sbjct: 123 LRKFINFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q A+QL+QFGA IF +DLM I RE+ L+ A++IAGRS S+ A+IG MKI +EI A+ Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 TMG ++ PR+ AL++++PL+ +++ +IIG +V DI FA F RF Sbjct: 241 NTMGFRSFEFIVIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREA 300 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + +IF GL KAP IG++A GF V + S+G T VV +I VI D+LF Sbjct: 301 VDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF 360 Query: 365 AIFYFAIGI 373 ++ + GI Sbjct: 361 SVILTSTGI 369 >gi|57238657|ref|YP_179788.1| ABC transporter, permease protein, putative [Campylobacter jejuni RM1221] gi|57167461|gb|AAW36240.1| ABC transporter, permease protein, putative [Campylobacter jejuni RM1221] gi|315059096|gb|ADT73425.1| Putative ABC transport system permease protein [Campylobacter jejuni subsp. jejuni S3] Length = 369 Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats. Identities = 114/369 (30%), Positives = 185/369 (50%), Gaps = 13/369 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 G W I ++ +A+ IQS I D + IDT G + ++ Sbjct: 11 TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKD 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + KI +G+++ + LF L +++ K +K ++F +GK ++ + Sbjct: 68 KNIKITKEGLNSRFQTLFELCEKNYQRLSKTKKSHKNFS-----EYFIDLGKLSLELLKI 122 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G ++ + F+ ++ + + +P+VIL + + G V+A Sbjct: 123 LRKFINFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q A+QL+QFGA IF +DLM I RE+ L+ A++IAGRS S+ A+IG MKI +EI A+ Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 TMG +I PR+ ALI+++PL+ +++ +IIG +V DI FA F RF Sbjct: 241 NTMGFRSFEFIIIPRVMALIVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREA 300 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + +IF GL KAP IG++A GF V + S+G T VV +I VI D+LF Sbjct: 301 VDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF 360 Query: 365 AIFYFAIGI 373 ++ + GI Sbjct: 361 SVVLTSAGI 369 >gi|86152328|ref|ZP_01070539.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|121613751|ref|YP_001001289.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 81-176] gi|167006183|ref|ZP_02271941.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 81-176] gi|315125046|ref|YP_004067050.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85840817|gb|EAQ58068.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|87249848|gb|EAQ72807.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 81-176] gi|315018768|gb|ADT66861.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 369 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 113/369 (30%), Positives = 185/369 (50%), Gaps = 13/369 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 G W I ++ +A+ IQS I D + IDT G + ++ Sbjct: 11 TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKD 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + KI +G+++ + LF L +++ K +K ++F +GK ++ + Sbjct: 68 KNIKITKEGLNSSFQTLFELCEKNYQRLSKTKKSHKNFS-----EYFIDLGKLSLELLKI 122 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G ++ + F+ ++ + + +P+VIL + + G V+A Sbjct: 123 LRKFINFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q A+QL+QFGA IF +DLM I RE+ L+ A++IAGRS S+ A+IG MKI +EI A+ Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 TMG +I PR+ AL++++PL+ +++ +IIG +V DI FA F RF Sbjct: 241 NTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREA 300 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + +IF GL KAP IG++A GF V + S+G T VV +I VI D+LF Sbjct: 301 VDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF 360 Query: 365 AIFYFAIGI 373 ++ + GI Sbjct: 361 SVILTSAGI 369 >gi|238759499|ref|ZP_04620662.1| ABC transporter, permease protein [Yersinia aldovae ATCC 35236] gi|238702274|gb|EEP94828.1| ABC transporter, permease protein [Yersinia aldovae ATCC 35236] Length = 381 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 121/365 (33%), Positives = 192/365 (52%), Gaps = 6/365 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 G W + V + SA+ D S + +DT GA L+ + + Sbjct: 21 VYIRGEWVLAHYRFLEPKVAQL--RVDLPASAMFDFSQLGGLDTAGATLLATLLGELRVS 78 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF-KNLHYHIGKKIVKFINDSCS 127 L+ ++ + ++ T + + N PQ + F L IG+ + D S Sbjct: 79 -NLRELAPRLPDERRVLLETVSQVLPNLVPQLTVKPQPFWIGLLVPIGQSVDNLWQDFKS 137 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +GL + +++ + SLI + +G++ VP+++L++F+ GAVIA GA Sbjct: 138 LLGFVGLTLEALLGTVFRPARWR--VTSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGA 195 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L+ FGA IF++DL+ LRE VLLTA+++AGR+ SA AEIG MK NEEIDAI+T+ Sbjct: 196 TVLTTFGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTL 255 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GL+ V +L+ PR+ AL+ISLP+LT + I G +V DI +F + ++ L Sbjct: 256 GLNPVELLVLPRVLALLISLPMLTFIGMICGIFGGMVVCALALDISPTMFLTIMQNSNGL 315 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ G+ KAP A I I+ EGF V + S+G TT VV SI +VI++D++ A+F Sbjct: 316 QHLLVGISKAPIFAFLIAIIGCLEGFKVSGSAESVGMHTTTSVVHSIFVVILLDAVAALF 375 Query: 368 YFAIG 372 + +G Sbjct: 376 FMEMG 380 >gi|222148407|ref|YP_002549364.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] gi|221735395|gb|ACM36358.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] Length = 376 Score = 287 bits (734), Expect = 3e-75, Method: Composition-based stats. Identities = 149/373 (39%), Positives = 226/373 (60%), Gaps = 11/373 (2%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + R +G+W++ + + ++ + + +D++ I+ +DT GA +I Sbjct: 11 LEGEAGQRLRLSGSWRNTTVDTVIPKLLEL--RETLNGHVEIDITGISSLDTSGAWIIRR 68 Query: 61 --FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 G +++ G S + +L S + + + F+ + +GK Sbjct: 69 IELAASKQGDVQIVGGSDAMRELISAL-----PEQPPLPEKVVDRRPFFQRVLEPVGKMS 123 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 V D + +++LG + T + + S++ Q+ ++G+ VP+++L+SF+ Sbjct: 124 VSLFEDVLAMSYVLGSAVRGTQS--KERRGGRASIASIVNQLDHMGLRAVPIILLMSFLI 181 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQGAFQL FGAE+F +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ Sbjct: 182 GAIIAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMR 241 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE+DA++ +GL+ + +L+ PRI AL+I+LPLLT++ANF+A+ GA++V + Y I F VF Sbjct: 242 EEVDALKVIGLNPIGVLVLPRIVALVIALPLLTVIANFAALYGAAVVSFAYSGITFQVFV 301 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 +R H A GLIKAPFMA IGIVA EG VG + SLG+ VT VV+SI +VI Sbjct: 302 TRLHDAVDYATFAAGLIKAPFMAVVIGIVAAVEGMKVGGSAESLGQHVTASVVKSIFVVI 361 Query: 359 IIDSLFAIFYFAI 371 ++D LFA+FY AI Sbjct: 362 LMDGLFAVFYAAI 374 >gi|296445994|ref|ZP_06887944.1| protein of unknown function DUF140 [Methylosinus trichosporium OB3b] gi|296256512|gb|EFH03589.1| protein of unknown function DUF140 [Methylosinus trichosporium OB3b] Length = 382 Score = 286 bits (733), Expect = 3e-75, Method: Composition-based stats. Identities = 135/373 (36%), Positives = 212/373 (56%), Gaps = 12/373 (3%) Query: 3 ENGITV-FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +G V F AG+W +I + + A+VDL ++ +DT GA +I Sbjct: 16 RDGAAVSFALAGDWVLAAAMDIERAAEKMVADGRGATRAVVDLVHVSRLDTAGAWVIGRA 75 Query: 62 M---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + + + ++G E L F R+ + +P+ S ++ +G+ + Sbjct: 76 LDELARAGVEASVEGARPEHELLLREAHF--RRFETDSRPRSSLCI----DILADLGRSV 129 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 V D+ + A LG ++ TG A + +F+ S + + G+ VP++ LI+ + Sbjct: 130 VTAGRDAFAGAVFLGEFVAVTGRAVAIARRFR--FTSFVYHLENFGLRSVPIIALINLLV 187 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA++AQQG FQL +FGA +++DL+ +L LRE+GVLL+++MIAGRSGSAI AE+GSMK+ Sbjct: 188 GAIVAQQGIFQLRRFGASTYAVDLIGVLVLRELGVLLSSIMIAGRSGSAITAELGSMKMR 247 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+R MGL + L++PRI AL++++PLL +A+ SA+ G +V W Y I + Sbjct: 248 EEIDALRVMGLSPMDALVTPRILALVVAMPLLAFIADMSALFGGLLVCWGYEGISPVAYL 307 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + G+IKAPFMA IGIV+ EG + + SLG+ VT VV+SI +VI Sbjct: 308 EWLQAAIGRNTFMVGIIKAPFMAFTIGIVSAMEGMSTKGSAESLGRHVTAAVVKSIFMVI 367 Query: 359 IIDSLFAIFYFAI 371 ++D LFAIF+ +I Sbjct: 368 VLDGLFAIFFASI 380 >gi|317013234|gb|ADU83842.1| putative ABC transport system permease protein [Helicobacter pylori Lithuania75] Length = 377 Score = 286 bits (733), Expect = 3e-75, Method: Composition-based stats. Identities = 103/371 (27%), Positives = 180/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S +D S ++D + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGSLKMDFSGCQKVDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + I+L VS + ++ K+ + + Y + L +GK IV+ Sbjct: 72 RERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKHY---ELLITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 STFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 VFSIVFSKLNI 377 >gi|319791003|ref|YP_004152643.1| hypothetical protein Varpa_0310 [Variovorax paradoxus EPS] gi|315593466|gb|ADU34532.1| protein of unknown function DUF140 [Variovorax paradoxus EPS] Length = 388 Score = 286 bits (733), Expect = 3e-75, Method: Composition-based stats. Identities = 92/374 (24%), Positives = 185/374 (49%), Gaps = 15/374 (4%) Query: 2 SENGITVFRFAGNWKSPEISEI--ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 + G G W + +S + + ++ + +D DL I ++D IGA+L+ Sbjct: 24 EQEGRQWTVATGRWTALGMSSLPAWQALSKSLAAAPPADDRAWDLRPIEQLDHIGAQLLW 83 Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ ++ ++++ Q +++ + + + + ++ + + Sbjct: 84 EHWRHEWPATLEME------AQHKAVLDQVAQYTVATPVEPPKTLADRIRTFSHNGPRAM 137 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 V + ++G + + G + + + +Y G + + + L+ + Sbjct: 138 VV----ARDFIGLIGQLAIDVGTLIRAPH--RAPWRDFSGHLYQFGATALHITALVGLLI 191 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G V+A + QL +GAE F ++++ + +RE+G +L AV+IAGRSGSAI A+IG M++ Sbjct: 192 GVVLAYLISQQLRNYGAEAFVVNILGLSLVRELGPVLAAVLIAGRSGSAITAQIGVMRVT 251 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE+DA+R MG+ L+ PR+ AL I++PL+++ + +A++G + DI A F Sbjct: 252 EELDAMRVMGIPHGFRLVMPRVLALAIAMPLISLWTSMAALLGGMLAADAALDISPAYFL 311 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 S +AN++ + K+ I ++ G V ++ SLG+ T+ VV SI+ VI Sbjct: 312 SALPRAVPIANLWLAMAKSAVFGILIALIGCYFGMKVKPNTESLGRGTTSSVVTSITAVI 371 Query: 359 IIDSLFAIFYFAIG 372 ++D+LFA+ + IG Sbjct: 372 LVDALFAVLFKGIG 385 >gi|152980330|ref|YP_001354931.1| ABC transport system permease protein [Janthinobacterium sp. Marseille] gi|151280407|gb|ABR88817.1| ABC transport system permease protein [Janthinobacterium sp. Marseille] Length = 374 Score = 286 bits (733), Expect = 3e-75, Method: Composition-based stats. Identities = 99/363 (27%), Positives = 176/363 (48%), Gaps = 13/363 (3%) Query: 12 AGNWKSPEI--SEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 AG+W+ + D + + + D DLS I +D IGA+L+ K Sbjct: 22 AGSWQVRALIDPGAMDKLTATLRGVRKVDETRWDLSGIEALDYIGAQLLWNAWGKKRPPQ 81 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 ++ E F + T ++K R + ++++ ++ + Sbjct: 82 LT--LAPQHESFFQRLEQTGTLQVKRPPQHRWYTFSAYLQFK-------LRMADHMLGFI 132 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 ++G ++ + G F +G + +++ G + + L+ F+ G V++ A Q Sbjct: 133 TLIGQLVMDMGRFIRQPQ--RGPWKEISANIFHTGYQALGITALVGFLIGVVLSYLSAQQ 190 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L QFG +IF ++++ + +RE+G LL A+++AGRSGS+I A++G M++ EE+DA+ MGL Sbjct: 191 LHQFGGDIFLVNILGMSVIRELGPLLAAILVAGRSGSSITAQLGVMRVTEELDAMLVMGL 250 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 LI P++ AL IS+PLL + + A+IG + F F LAN Sbjct: 251 PHGYRLIMPKVIALAISMPLLVVWTDAMALIGGMAAANVELGLSFKYFLRELPDAVPLAN 310 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + GL K I +VA G + ++ SLG+ T VV +I++VI+ D++FAI + Sbjct: 311 YWIGLGKGVVFGSLIALVACHFGLRIKPNTESLGEGTTISVVTAITVVILADAVFAIVFS 370 Query: 370 AIG 372 +G Sbjct: 371 GVG 373 >gi|283953736|ref|ZP_06371267.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 414] gi|283794777|gb|EFC33515.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 414] Length = 369 Score = 286 bits (733), Expect = 3e-75, Method: Composition-based stats. Identities = 111/364 (30%), Positives = 186/364 (51%), Gaps = 13/364 (3%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEKYHGKI 69 G W I ++ + + IQS I D + +IDT G + ++ + KI Sbjct: 16 GIWDKASIYKLKIKDFLTL---IQSKEVIFDFKDLEKIDTAGVRFFLALENDLKNKNIKI 72 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 QG+++ LF L +++ K +K ++F ++GK ++ + Sbjct: 73 TKQGLNSRFLTLFELCEKNYQRLNKTKKSHKNFS-----EYFINLGKLSLELLKILREFI 127 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 + G ++ + F+ L++ + + +P+VIL + + G V+A Q A+Q Sbjct: 128 NFTGAFFTSLFLCLKNPKNFR--LIAFLYHIENSAFKALPIVILTALLVGVVLAYQAAYQ 185 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L+QFGA IF +DLM I RE+ L+ A++IAGRS S+ A+IG MKI +EI A+ TMG Sbjct: 186 LAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAMNTMGF 245 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 +I PR+ AL++++PL+ +++ +I+G ++ DI FA F RF + + Sbjct: 246 RSFEFIIIPRVMALVVAMPLIVAISDAISIVGGMMIAKLNLDISFAEFLRRFREAVDIKH 305 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 I GL+KAP IG++A GF V + S+G T VV +I VI D+LF++ Sbjct: 306 ILIGLVKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALFSVVLT 365 Query: 370 AIGI 373 + GI Sbjct: 366 SAGI 369 >gi|260219765|emb|CBA26623.1| hypothetical protein Csp_H39530 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 387 Score = 286 bits (732), Expect = 4e-75, Method: Composition-based stats. Identities = 94/370 (25%), Positives = 191/370 (51%), Gaps = 21/370 (5%) Query: 11 FAGNWKSPEISEIADDVVMAINKSIQ------SDSAIVDLSAITEIDTIGAELIM-YFME 63 G W + +S A V + K++Q + + DL ID GA+++ + Sbjct: 32 LRGRWTADALS--AKHVWQPLEKALQGVPGNGAPAVAWDLREAQRIDHTGAQVLWNAWGR 89 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 ++ K++ + + +L+ + + +R ++ L +G+K+ + + Sbjct: 90 QWPAKLQAEPLQ------KALLDRVAKFTVPTPPVERLDWH----ALLVSLGRKLARVES 139 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 ++G ++ + + + G + +Y +G + +P+ L+ F+ G V+A Sbjct: 140 HLGGMVRLIGQLMLDVLQLLRHPLQ--GPWRDVSGHLYRIGATALPITALVGFLIGVVLA 197 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 + QL Q+GA+ F ++++ + +RE+G +L A+++AGRSGSAI A+IG M++ EE+DA Sbjct: 198 YLMSKQLRQYGADSFIVNILGMSLIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELDA 257 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R MG+ L+ PR A+ I++PL+ + +A++G + + A FF+ Sbjct: 258 MRVMGIPKGFRLVMPRTLAMAIAMPLVAVWTTMAALLGGMLASDLSMGLTPAYFFTALPK 317 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 T ++N++ L+K+ I ++A G V + SLG+ T VV SI++VI++D+L Sbjct: 318 TVEISNLWLSLVKSCVFGVLISLLACHHGLRVKPDTQSLGEGTTASVVSSITMVILVDAL 377 Query: 364 FAIFYFAIGI 373 FA+ + ++G+ Sbjct: 378 FAVIFKSVGL 387 >gi|221639257|ref|YP_002525519.1| ABC transporter inner membrane subunit [Rhodobacter sphaeroides KD131] gi|221160038|gb|ACM01018.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides KD131] Length = 356 Score = 286 bits (732), Expect = 4e-75, Method: Composition-based stats. Identities = 109/366 (29%), Positives = 194/366 (53%), Gaps = 15/366 (4%) Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK-- 68 G + E + +D++A+ +DT GA I+ ++ Sbjct: 3 LRGRLTIETLPETQRSLGSV------GAGGQIDMAAVEALDTAGAWAILQAQKRAEAAGQ 56 Query: 69 -IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 +++ +S L ++ + + +R + ++G+++ + + S + Sbjct: 57 ALEIVNLSESHRHLLETVAA----AMPEPERRRRTIPGRPDDGLANLGQEVAQGLRGSLT 112 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 G V+++ G + K L L+ M G + VP+V L+ F+ G V+A QG+ Sbjct: 113 SVGFFGEVVAHLGALVLHPTRLK--LTPLVHHMQEAGWNAVPIVSLMGFLIGIVLAFQGS 170 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGAE++ +DL++I LRE+G+LLTA+++AGRS SA A IGSMK+ EEIDA+R + Sbjct: 171 TQLKSFGAEVYVVDLVAISILRELGILLTAIIVAGRSASAFTAAIGSMKMREEIDAMRVL 230 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GLD + L+ PR+ AL+I LP L +A+ + ++G ++ W I +F ++ + + Sbjct: 231 GLDPIDRLVLPRLIALVILLPALGFIASLAGLVGGGLMAWIDLGITPGMFRTQLLADTDV 290 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ GL+KAPF A I ++ +G V ++ SLG + VVQ+I +VI++D+LF+IF Sbjct: 291 SHAIIGLVKAPFFAVIIAVIGCHQGMQVSGNAESLGSHTSRSVVQAIFLVIVVDALFSIF 350 Query: 368 YFAIGI 373 + G+ Sbjct: 351 FAVWGL 356 >gi|157415866|ref|YP_001483122.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 81116] gi|157386830|gb|ABV53145.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 81116] gi|307748503|gb|ADN91773.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni M1] gi|315931385|gb|EFV10354.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 327] Length = 369 Score = 286 bits (732), Expect = 4e-75, Method: Composition-based stats. Identities = 113/369 (30%), Positives = 185/369 (50%), Gaps = 13/369 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 G W I ++ +A+ IQS I D + IDT G + ++ Sbjct: 11 TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKD 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + KI +G+++ + LF L +++ K +K ++F +GK ++ + Sbjct: 68 KNIKITKEGLNSRFQTLFELCEKNYQRLSKTKKSHKNFS-----EYFIDLGKLSLELLKI 122 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G ++ + F+ ++ + + +P+VIL + + G V+A Sbjct: 123 LIKFTNFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q A+QL+QFGA IF +DLM I RE+ L+ A++IAGRS S+ A+IG MKI +EI A+ Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 TMG +I PR+ AL++++PL+ +++ +IIG +V DI FA F RF Sbjct: 241 NTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREA 300 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + +IF GL KAP IG++A GF V + S+G T VV +I VI D+LF Sbjct: 301 VDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF 360 Query: 365 AIFYFAIGI 373 ++ + GI Sbjct: 361 SVVLTSAGI 369 >gi|94263144|ref|ZP_01286962.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|93456515|gb|EAT06629.1| conserved hypothetical protein [delta proteobacterium MLMS-1] Length = 379 Score = 286 bits (732), Expect = 4e-75, Method: Composition-based stats. Identities = 98/375 (26%), Positives = 183/375 (48%), Gaps = 17/375 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59 S +GI G ++ I + ++ + K+ ++D+ + +D G L++ Sbjct: 19 SADGILHAVVRGRMEAGSIGPLWQELASKLKKTRAG--LVLDVEKVDYLDMSGQALLLHF 76 Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 M+ + ++++G+ + IS Q+ + +G+ Sbjct: 77 SRLMQDGNLPVEIRGLHPDFRHIQEQISRFDCHSKPAQR---------RLSAVEELGRAA 127 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 V D +G +S+ A + ++ M VG V ++ L+ F+ Sbjct: 128 VNLGRDIGQFFSFVGEFVSSLAYCLAHPGTVR--WKDVLSHMENVGGRAVFIIALMGFLI 185 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G +IA Q A L FGAE+F L+ + +RE+G L+TA+++AGRSGSA AEIG+MK N Sbjct: 186 GVIIAFQTAITLKTFGAEMFVAKLLGLSMVRELGPLVTAIILAGRSGSAFAAEIGTMKTN 245 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEI+A++TMGL+ VR L+ PR+ A ++ PLL + + IG ++V+ D + Sbjct: 246 EEINALQTMGLNPVRFLVVPRMLATMLVTPLLCVFFLLFSFIGGALVM-LSMDFTLNSYV 304 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + ++ +A+ G++K + + V G G ++++G+ T+ VV +I ++I Sbjct: 305 HQLSTSVGMADFLGGMVKVLVFSILVAWVGCVRGLQTGSGASAVGRSTTSAVVSAIILII 364 Query: 359 IIDSLFAIFYFAIGI 373 + D +FA+ Y+ +GI Sbjct: 365 LADGIFAVVYYMLGI 379 >gi|264676422|ref|YP_003276328.1| inner membrane ABC-transporter component [Comamonas testosteroni CNB-2] gi|299533747|ref|ZP_07047119.1| putative ABC transporter, permease protein [Comamonas testosteroni S44] gi|262206934|gb|ACY31032.1| putative inner membrane ABC-transporter component [Comamonas testosteroni CNB-2] gi|298718296|gb|EFI59281.1| putative ABC transporter, permease protein [Comamonas testosteroni S44] Length = 375 Score = 285 bits (731), Expect = 5e-75, Method: Composition-based stats. Identities = 103/371 (27%), Positives = 176/371 (47%), Gaps = 10/371 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S G AG W + E+ + +A A DL + D IGA+L+ Sbjct: 14 SREGQQWAVPAGRWSAAELGDRHIWRRLAPQIRAVPKGAAWDLQQMVWFDHIGAQLLWE- 72 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 GK + T Q L ++ KP+ S + L G+ ++ Sbjct: 73 ---QWGKAWPAQLLTTKTQRSMLERVARFSEVPESKPEPSGWMCEVNRL----GQMVIDA 125 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + ++G ++ + + +G + +Y G + +P+ L+ F+ G V Sbjct: 126 CGHFSNLIQLVGQLLLDCLRLLRNP--LRGPWRDISGHLYATGATALPITALVGFLIGVV 183 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A A QL QFGAE F ++++ I +RE+G LL A+++AGRSGSAI A+IG M++ EE+ Sbjct: 184 LAYLMALQLRQFGAESFIVNILGISLIRELGPLLAAILVAGRSGSAITAQIGVMRVTEEL 243 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA++ MG+ L+ PR AL +S+PL+ + +A+ G + DI + F Sbjct: 244 DAMQVMGISQGYRLVLPRALALAVSMPLVALWTILAALAGGMVAADLTMDITPSYFVQSL 303 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + + N+ + K+ I ++ G V ++ SLG+ T VV SI++VII+D Sbjct: 304 PAAVKVGNLVLAMGKSVVFGVLIALIGCHWGLKVEPNTQSLGRGTTAAVVSSITMVIIVD 363 Query: 362 SLFAIFYFAIG 372 ++FAI + +G Sbjct: 364 AIFAILFRNVG 374 >gi|222823161|ref|YP_002574734.1| ABC transporter permease (DUF140 domain protein) [Campylobacter lari RM2100] gi|222538382|gb|ACM63483.1| putative ABC transporter, permease protein (DUF140 domain protein) [Campylobacter lari RM2100] Length = 370 Score = 285 bits (731), Expect = 5e-75, Method: Composition-based stats. Identities = 108/372 (29%), Positives = 187/372 (50%), Gaps = 16/372 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF-- 61 N +F G W + ++ + I D + + IDT G + Sbjct: 11 NHECIFSVFGIWDKTSVGKLEKLDF------PTQKNIIFDFTNLDFIDTAGIRYFLALEN 64 Query: 62 -MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 +++ ++ + + +LF L ++ + + +++ K+ ++GKK+V+ Sbjct: 65 ELKQKGFELSRVNLKSEHAKLFELCQKHYKSFCDSYEDKKT-----IKDFFENLGKKVVE 119 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + +GL+I+ K + + + + ++ +P+++L S + G Sbjct: 120 SFTLLVQFLNFIGLIIATCFNTLFHLKKLR--FRAFLYHVENSAINALPIIMLTSLLVGV 177 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A Q A+QL+QFGA I+ +DLM I RE+ L++A++IAGRS S+ A+IG MK+ +E Sbjct: 178 VLAYQAAYQLAQFGANIYIVDLMGISATRELAPLISAIVIAGRSASSYTAQIGVMKLTDE 237 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA++TMG +I PR+ AL +++PL+ I+A+ +IIG IV W +I + F SR Sbjct: 238 IDAMKTMGFKESEFIILPRVLALALAMPLVVIVADILSIIGGIIVAWFSLEISASEFMSR 297 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 F L +I GLIKAP I +A GF V + S+G T VV +I VI Sbjct: 298 FKEAVELKHIIIGLIKAPIFGFLIASIACFRGFFVQKTTESIGVYTTKSVVNAIFWVIAF 357 Query: 361 DSLFAIFYFAIG 372 D++F++F G Sbjct: 358 DAIFSVFLTKAG 369 >gi|154706662|ref|YP_001424136.1| ABC transporter permease protein [Coxiella burnetii Dugway 5J108-111] gi|154355948|gb|ABS77410.1| ABC transporter permease protein [Coxiella burnetii Dugway 5J108-111] Length = 377 Score = 285 bits (731), Expect = 5e-75, Method: Composition-based stats. Identities = 114/364 (31%), Positives = 189/364 (51%), Gaps = 13/364 (3%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAEL---IMYFMEKYHGKI 69 G+W +S + D + + K S+ I+ IT++D+ GA L ++ ++ I Sbjct: 24 GDWTVSHLSPLEDQLPLCAEKL--SEKVIIHADKITKMDSAGALLFYTLINHLKSLGKAI 81 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 ++ G+S + + L LI + + ++ + Y +G+ V Sbjct: 82 EITGLSENAQSLLKLIGNESKFLRQPLPSSKTP------GVVYLLGEWAVTKWRVLIDFL 135 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 +G V + G+ + +++R + G +P+V L+SF+ G V+ Q A Q Sbjct: 136 TFVGEVATTAGQGILKPQ--RIQWRAILRAIEETGYQALPIVALLSFLVGVVLTYQIALQ 193 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L + A+IF +D+ LRE G L+TA++ AGR+ +A A+IG+MK+NEEIDA+ TMG+ Sbjct: 194 LDSYNADIFVVDITGAAILREFGPLITAIIAAGRTSTAFTAQIGTMKVNEEIDALNTMGV 253 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 + L+ P+I ALIISL LLT+ A+ G+ I+ DI + F RFH + + Sbjct: 254 VPIEHLVLPKIIALIISLTLLTVWADIFGTFGSMIMAKSQLDIGYLAFLDRFHHAIAVRH 313 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 GLIKAP I V +GF VG ++S+G+K T VQSI ++II D++F++ + Sbjct: 314 YIAGLIKAPVFGLIIATVGCFQGFQVGASADSVGQKTTQSAVQSIFLIIIADAIFSVIFS 373 Query: 370 AIGI 373 GI Sbjct: 374 LRGI 377 >gi|94309017|ref|YP_582227.1| hypothetical protein Rmet_0072 [Cupriavidus metallidurans CH34] gi|93352869|gb|ABF06958.1| ABC transporter, inner membrane subunit [Cupriavidus metallidurans CH34] Length = 376 Score = 285 bits (731), Expect = 5e-75, Method: Composition-based stats. Identities = 105/368 (28%), Positives = 176/368 (47%), Gaps = 14/368 (3%) Query: 9 FRFAGNWKSPEIS---EIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 + G W + ++ E S A L IT +D IGA+LI + Sbjct: 20 VQLQGEWTAVALAGCHEARGLRAQLHELSEAPRHAEWSLDGITRLDHIGAQLIWQAWNGH 79 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 ++ +++F+ I+ + K +R N +G ++ F+ Sbjct: 80 MPD--NVSLNDGQKRVFARIAGLRTEGWKKHMVERF-------NPVTIVGASVLSFLAQL 130 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 +LG ++ + F + +G + +Y VG + + L++F+ G V++ Sbjct: 131 GVGVTMLGQLVFDLLRFLRAPQ--RGPWREISANIYNVGYKALGITALVAFLIGIVLSYL 188 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A QL FGA F ++++ + +RE+G +L A++IAGRSGSAI A+IG M++ EE+DA+ Sbjct: 189 SANQLRIFGASTFIVNILGMAVIRELGPVLAAILIAGRSGSAITAQIGVMRVTEELDAMS 248 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MG+ L+ PR+ AL IS+PLL + A+ G + DI + F + Sbjct: 249 VMGISHGFRLVMPRVIALAISMPLLVAWTDLLALFGGMVAARLQLDISYVYFLRQLPDAV 308 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 +AN++ GL K I + A G V ++ SLG+ T VV SI++VII D++FA Sbjct: 309 PVANLWFGLCKGVVFGMLIALTACHFGLRVKPNTQSLGQGTTASVVTSITVVIIADAVFA 368 Query: 366 IFYFAIGI 373 I + IGI Sbjct: 369 ILFKDIGI 376 >gi|328543112|ref|YP_004303221.1| ABC transporter permease protein [Polymorphum gilvum SL003B-26A1] gi|326412858|gb|ADZ69921.1| ABC transporter permease protein [Polymorphum gilvum SL003B-26A1] Length = 381 Score = 285 bits (731), Expect = 6e-75, Method: Composition-based stats. Identities = 131/374 (35%), Positives = 209/374 (55%), Gaps = 12/374 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +G+W + + + + + + +DLS I+ +DT GA L+ Sbjct: 17 DGDRLAVALSGDWTIHT--AMDAEAALGVIDTSDVGTVRIDLSGISVLDTSGAWLLHRMR 74 Query: 63 EK---YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 + ++ L GV+ E L S + H ++ + S ++ G+ +V Sbjct: 75 GRIEFAGVRVILTGVAPKYELLLSEVDAHHPPPWSPER-----YRYSIVSVLETTGRHVV 129 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 D + HILG + + +G +S+ Q + VP++ L+SF+ G Sbjct: 130 DAGKDLVAMMHILGSLSVVVAGVLFRPGRLRG--ISIAVQFDKSCIGAVPIIALMSFLIG 187 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 A+IAQQG F L QFGA++F +DL +L LREIGVLLTA+M+AGRSGSA AE+GSMK+ E Sbjct: 188 AIIAQQGGFYLRQFGADLFVVDLAGVLVLREIGVLLTAIMVAGRSGSAFTAELGSMKMQE 247 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDA+ +GL +LI PR+ AL++++P+LT +++ +A+ G+ +V W Y IP A + + Sbjct: 248 EIDALHVIGLSVTEVLILPRLLALMVAMPVLTFVSDIAALFGSGLVTWSYLGIPPAAYMA 307 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 R + G++KAPFMA IG++A EG VG ++SLG+ T VV++I +VI+ Sbjct: 308 RLEEAISFQTFLVGMVKAPFMALIIGLIACVEGLKVGGSADSLGRHTTMSVVKAIFLVIV 367 Query: 360 IDSLFAIFYFAIGI 373 +D LFAIF+ AI + Sbjct: 368 VDGLFAIFFAAIDV 381 >gi|217031805|ref|ZP_03437308.1| hypothetical protein HPB128_199g13 [Helicobacter pylori B128] gi|216946457|gb|EEC25059.1| hypothetical protein HPB128_199g13 [Helicobacter pylori B128] Length = 367 Score = 285 bits (730), Expect = 6e-75, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 182/371 (49%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S +D S ++D + + + Sbjct: 4 DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGSLKMDFSGCQKVDFVFGMFLFDLI 61 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + Y + L +GK IV+ Sbjct: 62 KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKKY---ELLITKLGKSIVETY 118 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 119 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 176 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QG QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 177 ALQGVLQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 236 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F+ + RFH Sbjct: 237 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFSSYIDRFH 296 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 297 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 356 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 357 VFSIVFSKLNI 367 >gi|27381005|ref|NP_772534.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27354171|dbj|BAC51159.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 367 Score = 285 bits (730), Expect = 7e-75, Method: Composition-based stats. Identities = 127/368 (34%), Positives = 193/368 (52%), Gaps = 11/368 (2%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG- 67 G W + + V A + S +D+S + ++DT GA LI Sbjct: 8 LCATGTWTASFAPVLERMVADAEKLAGSPQSIFIDVSEVAKLDTFGAWLIERLRRSLTQG 67 Query: 68 --KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 + ++ G+S + L + P + + IG+ + Sbjct: 68 TVEAQIAGLSANYSSLVDEVRRVRA------TPVVDAGTITITGMLDQIGRAVAGVAGTV 121 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 +LG V++ G F+ L S + M V VP+++LI+F+ G +IAQQ Sbjct: 122 AGLIDMLGAVLAAGGRVLIHPRSFR--LTSTVHHMEQVCWRAVPIIVLITFLIGCIIAQQ 179 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 G F +FGA+IF +D++ +L LREIGVLL A+M+AGRSGSA AE+GSMK+ EEIDA+R Sbjct: 180 GIFHFRRFGADIFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMKMREEIDALR 239 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 TMG D + +L+ PR+ AL+++LP+L L +A+ G +V W Y + F R Sbjct: 240 TMGFDPIEVLVLPRMLALVLALPILAFLGAMAALYGGGLVAWLYGGVDPEAFLLRLRDAI 299 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 ++ + G++KAP MA IGIVA EG AV + SLG+ T VV+ I VI++D +FA Sbjct: 300 SIDHFIVGIVKAPVMAAVIGIVACVEGLAVQGSAESLGQHTTASVVKGIFFVIVMDGVFA 359 Query: 366 IFYFAIGI 373 IF+ +IG+ Sbjct: 360 IFFASIGM 367 >gi|163759630|ref|ZP_02166715.1| ABC transporter, membrane spanning protein [Hoeflea phototrophica DFL-43] gi|162283227|gb|EDQ33513.1| ABC transporter, membrane spanning protein [Hoeflea phototrophica DFL-43] Length = 428 Score = 285 bits (730), Expect = 7e-75, Method: Composition-based stats. Identities = 151/371 (40%), Positives = 226/371 (60%), Gaps = 10/371 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM- 62 G G+W+ I+ + +++ ++ K I ++DLS ++ DT GA L+ M Sbjct: 63 GGRQRLALWGDWRHAAIAGVYGELL-SVQKKISGADLVIDLSDLSNFDTAGAWLVRKTMV 121 Query: 63 --EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 + ++++G S + L S I + + F+ + +G+ + + Sbjct: 122 VAKGQGASVEIEGASKPVSGLLSAI----PDPADRAEVAATERAPLFQRIFAPVGRALYE 177 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 +D + +ILG + S +++ Q+ ++GV VP+++L+SF+ GA Sbjct: 178 LFDDLIASMYILGSAVRGAQLKLDRSAGISP--AAIVTQIDHMGVRAVPIIMLMSFLIGA 235 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 +IAQQGAFQL FGAE+F +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EE Sbjct: 236 IIAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREE 295 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +DA++ +GL+ V +L+ PR+ AL ++LPLLT++ANF+A+ GA+ V W Y I VF SR Sbjct: 296 VDALKVIGLNPVGVLVFPRLVALTVALPLLTVVANFAALAGAAAVAWSYSGITPDVFTSR 355 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + + +G+IKAPFMA IGIVA EG VG + SLG++VT VV+SI +VI++ Sbjct: 356 LREAIDMTTVASGMIKAPFMALIIGIVASVEGMKVGGSAESLGRRVTASVVKSIFVVILV 415 Query: 361 DSLFAIFYFAI 371 D LFAIFY AI Sbjct: 416 DGLFAIFYAAI 426 >gi|163793381|ref|ZP_02187356.1| ABC transporter, inner membrane subunit [alpha proteobacterium BAL199] gi|159181183|gb|EDP65698.1| ABC transporter, inner membrane subunit [alpha proteobacterium BAL199] Length = 391 Score = 285 bits (730), Expect = 8e-75, Method: Composition-based stats. Identities = 118/375 (31%), Positives = 213/375 (56%), Gaps = 12/375 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + +G V R G W + + +++ + S VD ++++ +D+ GA +I Sbjct: 26 TRDGTLVVRLRGPWTLQTALSVDAAIRALADRA--AASVTVDATSLSRLDSAGAWVIQRT 83 Query: 62 MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + ++ + +++ G+ ++ + + + P +S N +G++ Sbjct: 84 VAQFDRRGVPVEIVGLDEGLQAILDKAAEHDQSADIAPAPT-----SSLLNFLERLGRRS 138 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 V+ ++ + +LG+V+ +G +G +++ Q+ GV+ +P+V L+ F+ Sbjct: 139 VEGLHTGRNLLGLLGVVVVASGRIVVRPMTLRG--TAVVAQIEATGVTALPIVGLLCFLV 196 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G V+A GA QL++FGA +++L+ I LREIG+LLTA+++AGRSGSA A+IG+MK+N Sbjct: 197 GVVLAYMGALQLTRFGAANLTVNLVGISVLREIGILLTAIIVAGRSGSAFAAQIGTMKVN 256 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 +EIDA+ TMGL + +L+ PR+ ALII LP LT+ A+ + ++G ++V D+ F Sbjct: 257 QEIDALETMGLSVIDVLVLPRVIALIIVLPALTVFADVAGLVGGAMVCMFQLDMTIGQFL 316 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 ++ + T+ + TGLIKAP A AI +V G V + S+G++ T VV+SI +VI Sbjct: 317 TQLSAGVTVWSFATGLIKAPVFALAIALVGCHSGLGVSGSAESVGRQTTRAVVESIFLVI 376 Query: 359 IIDSLFAIFYFAIGI 373 I++++FAI + IGI Sbjct: 377 ILNAIFAIAFAKIGI 391 >gi|114707109|ref|ZP_01440007.1| permease of ABC transporter [Fulvimarina pelagi HTCC2506] gi|114537305|gb|EAU40431.1| permease of ABC transporter [Fulvimarina pelagi HTCC2506] Length = 394 Score = 285 bits (729), Expect = 8e-75, Method: Composition-based stats. Identities = 142/374 (37%), Positives = 228/374 (60%), Gaps = 9/374 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 G V AG+W + I I D+ + +D A+ DLS + +IDT GA ++ Sbjct: 27 RGGTLVLEAAGDWLARTIGSIESDLERTARADLGADVAM-DLSRVGQIDTAGAFVLERLK 85 Query: 63 EKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 K ++++G++ LF+ + ++ ++ +RS N +G ++ Sbjct: 86 RDLRAKREHVEVEGLAERNTALFAAVGSAMDRERPVRQRERS---KILTNAVIAVGSFVI 142 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 ++ + +++G + G + + + ++ Q+ +GV +P+++LI+F+ G Sbjct: 143 GIKDELVNGLNLIGGAMYGAGSRISGRTQSRP--AAIFNQIDQMGVKAIPIIVLITFLVG 200 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 +IAQQGAFQL ++G E+++++L+SIL LREIGVLL A+MIAGRSGSAI AEIGSMK+ E Sbjct: 201 GIIAQQGAFQLRRYGGEVYAVNLISILVLREIGVLLAAIMIAGRSGSAICAEIGSMKMRE 260 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DA+ +GL+ + +L+ PR+ AL I+LPLLT++AN +A++G +I + Y DI F F Sbjct: 261 EVDALHVIGLNPIGVLVFPRLVALSIALPLLTVIANLAALVGGAITLRIYSDISFLNFLQ 320 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 + L +F+GL+KAPFMA IG+VA EG VG + SLG +VT VV+SI +VI+ Sbjct: 321 GLQQSIDLFTVFSGLLKAPFMAILIGLVAANEGMKVGGSAESLGLRVTAAVVKSIFLVIV 380 Query: 360 IDSLFAIFYFAIGI 373 +D LFAIFY +IG+ Sbjct: 381 MDGLFAIFYASIGL 394 >gi|107102741|ref|ZP_01366659.1| hypothetical protein PaerPA_01003808 [Pseudomonas aeruginosa PACS2] Length = 372 Score = 285 bits (729), Expect = 9e-75, Method: Composition-based stats. Identities = 114/364 (31%), Positives = 186/364 (51%), Gaps = 4/364 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G+W + + +V +S + +A DLS + +DT GA L+ + Sbjct: 12 VRAIGDWTLAHYTALEREVTRL--RSEVAANASFDLSQLGALDTAGAALLAELLGAERLA 69 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + + +L+ +P++ + L IG + F + Sbjct: 70 DLAELEPGLPRERQALLKTVGHALHDFCEPEKPKPPTTAIELLARIGCAMETFWLHLKAL 129 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +GL + ++ + L+ + G+ VP++ L++F+ GAVIA GA Sbjct: 130 LGFIGLTLETLFRSLVRPASWR--VTPLVANIEKSGLDAVPIIALLTFLVGAVIAFLGAT 187 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L+ FGA I++++L+ LRE VLLTA+++AGR+ SA A+IGSMK NEEIDAIR +G Sbjct: 188 VLANFGATIYTVNLVVFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRALG 247 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 L+ + +L+ PR+ AL++SLP+LT + I+G V DIP A+F S + Sbjct: 248 LNPIELLVLPRVLALLVSLPMLTFVGMLCGIVGGMTVCAWTLDIPPAMFLSIMEDGIGVQ 307 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + G+ KAP A I ++ EGF V + S+G+ TT VV SI +VI++D+L A+F+ Sbjct: 308 HFLVGISKAPLFAFLIAVIGCLEGFKVSGSAQSVGEHTTTSVVHSIFVVILLDALAALFF 367 Query: 369 FAIG 372 +G Sbjct: 368 MEMG 371 >gi|325982943|ref|YP_004295345.1| hypothetical protein NAL212_2362 [Nitrosomonas sp. AL212] gi|325532462|gb|ADZ27183.1| protein of unknown function DUF140 [Nitrosomonas sp. AL212] Length = 370 Score = 285 bits (729), Expect = 9e-75, Method: Composition-based stats. Identities = 88/372 (23%), Positives = 179/372 (48%), Gaps = 11/372 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +++G G++ + + + +++ ++ + DL+ I +IDT G L+ Sbjct: 9 TKDGSPHIILTGDYTLATLESLLKPLEDELSREARNQNLYWDLTGIGQIDTAGTILLWRV 68 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 K +LQ + E++F + Q + +GK ++ Sbjct: 69 -WKTKRPDRLQ-LRPEHEKMFQRLERLPTH-------QSGIKHRDLLWPITTLGKLVLVL 119 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 S ++G ++ + + +Y G + + L+ F+ G V Sbjct: 120 WQHSVGLITLIGQLMLDVIYLIRHPVYIP--WREISANLYRTGAQALGITALVGFLIGIV 177 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 ++ + QL FGA+IF I+++ I +RE+G +L A+++AGRSGSA+ A++G M++ +E+ Sbjct: 178 LSYLSSKQLQLFGADIFIINILGISIIRELGPMLAAILVAGRSGSAMTAQLGVMRVTQEL 237 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ MG+ + LI P++ L I++PLL + + A++G + + + F + Sbjct: 238 DALTVMGISHSQRLILPKVLGLGIAMPLLVMWTSAVALLGGMVAAEIQLGLHYHYFITAL 297 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + + N++ GL K I ++A G + ++ SLG+ T VV +I++VIIID Sbjct: 298 PDSVPVGNLWLGLGKGIVCGMVIALIACHFGLKIKPNTESLGEGTTASVVTAITMVIIID 357 Query: 362 SLFAIFYFAIGI 373 ++FA+ + +G+ Sbjct: 358 AIFAVLFSDVGL 369 >gi|29654061|ref|NP_819753.1| ABC transporter permease [Coxiella burnetii RSA 493] gi|161830426|ref|YP_001596961.1| ABC transporter, permease protein [Coxiella burnetii RSA 331] gi|165924016|ref|ZP_02219848.1| ABC transporter, permease protein [Coxiella burnetii RSA 334] gi|212212807|ref|YP_002303743.1| ABC transporter permease protein [Coxiella burnetii CbuG_Q212] gi|29541327|gb|AAO90267.1| ABC transporter permease protein [Coxiella burnetii RSA 493] gi|161762293|gb|ABX77935.1| ABC transporter, permease protein [Coxiella burnetii RSA 331] gi|165916539|gb|EDR35143.1| ABC transporter, permease protein [Coxiella burnetii RSA 334] gi|212011217|gb|ACJ18598.1| ABC transporter permease protein [Coxiella burnetii CbuG_Q212] Length = 377 Score = 285 bits (729), Expect = 1e-74, Method: Composition-based stats. Identities = 114/364 (31%), Positives = 189/364 (51%), Gaps = 13/364 (3%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAEL---IMYFMEKYHGKI 69 G+W +S + D + + K S+ I+ IT++D+ GA L ++ ++ I Sbjct: 24 GDWTVSHLSPLEDQLPLYAEKL--SEKVIIHADKITKMDSAGALLFYTLINHLKSLGKAI 81 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 ++ G+S + + L LI + + ++ + Y +G+ V Sbjct: 82 EITGLSENAQSLLKLIGNESKFLRQPLPSSKTP------GVVYLLGEWAVTKWRVLIDFL 135 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 +G V + G+ + +++R + G +P+V L+SF+ G V+ Q A Q Sbjct: 136 TFVGEVATTAGQGILKPQ--RIQWRAILRAIEETGYQALPIVALLSFLVGVVLTYQIALQ 193 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L + A+IF +D+ LRE G L+TA++ AGR+ +A A+IG+MK+NEEIDA+ TMG+ Sbjct: 194 LDSYNADIFVVDITGAAILREFGPLITAIIAAGRTSTAFTAQIGTMKVNEEIDALNTMGV 253 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 + L+ P+I ALIISL LLT+ A+ G+ I+ DI + F RFH + + Sbjct: 254 VPIEHLVLPKIIALIISLTLLTVWADIFGTFGSMIMAKSQLDIGYLAFLDRFHHAIAVRH 313 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 GLIKAP I V +GF VG ++S+G+K T VQSI ++II D++F++ + Sbjct: 314 YIAGLIKAPVFGLIIATVGCFQGFQVGASADSVGQKTTQSAVQSIFLIIIADAIFSVIFS 373 Query: 370 AIGI 373 GI Sbjct: 374 LRGI 377 >gi|217969575|ref|YP_002354809.1| hypothetical protein Tmz1t_1154 [Thauera sp. MZ1T] gi|217506902|gb|ACK53913.1| protein of unknown function DUF140 [Thauera sp. MZ1T] Length = 385 Score = 285 bits (729), Expect = 1e-74, Method: Composition-based stats. Identities = 113/373 (30%), Positives = 198/373 (53%), Gaps = 5/373 (1%) Query: 1 MSENGIT-VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 ++ +G+ V R G+W + + + + V+L+ + +DT GA L+ Sbjct: 16 LAGDGVAAVLRLRGDWTLAHHAALRRQADALRGRI--DAATRVELAELGTLDTAGARLLH 73 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 + L + +L+ ++ + + ++ HIG ++ Sbjct: 74 GLLGGERVAALLADEGALSRERRALLKAVADAIEGREERPAADEGYALGDVLAHIGHTML 133 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 F + +GL++ +++ + +L+ + G+ VP++ L++F+ G Sbjct: 134 VFWRHVSALTGFIGLILETALRVSVQPRRWR--VTALVANLERTGLDAVPIIALLTFLVG 191 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 AV+A GA L FGA IF++DL++ LRE GVLLTA+++AGR+ S+ A+IGSM+ NE Sbjct: 192 AVVAFLGATVLQNFGASIFTVDLVAYSFLREFGVLLTAIIVAGRTASSFTAQIGSMRANE 251 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDAIR +GLD V +L+ PR++AL+++LP+LT +A + I+G +V DI +F S Sbjct: 252 EIDAIRVLGLDPVELLVLPRVYALLVALPILTFVAMIAGIVGGMLVSAMTLDISPVLFLS 311 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 R L + + G+ KAP A I ++ EGF V + S+G+ T+ VVQSI +VI+ Sbjct: 312 RIEDNVGLIHFWVGMAKAPIFAFLIAVIGCLEGFRVQGSAQSVGEHTTSAVVQSIFVVIV 371 Query: 360 IDSLFAIFYFAIG 372 +D++ A+F +G Sbjct: 372 VDAIAALFCMEMG 384 >gi|16126557|ref|NP_421121.1| ABC transporter permease [Caulobacter crescentus CB15] gi|221235339|ref|YP_002517776.1| ABC transporter permease protein [Caulobacter crescentus NA1000] gi|13423841|gb|AAK24289.1| ABC transporter, permease protein, putative [Caulobacter crescentus CB15] gi|220964512|gb|ACL95868.1| ABC transporter permease protein [Caulobacter crescentus NA1000] Length = 371 Score = 285 bits (729), Expect = 1e-74, Method: Composition-based stats. Identities = 109/372 (29%), Positives = 188/372 (50%), Gaps = 11/372 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G V AG+W + + + + A+ DL+ + DT GA I+ Sbjct: 11 EQDGGLVAVLAGDWTARGLFDAGPRLTEALE---DRRDLRFDLTGVNRCDTAGAYAILRA 67 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 ++ + +L L+ + + PQR+ F L IG+ + Sbjct: 68 AGDRLKSDRII-ARKQVLRLLELVGAAIKVE-----PQRAARPTGFYALLERIGRGVFGL 121 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 D LG ++ G S ++ + ++ G+ +P++ +F GAV Sbjct: 122 FADGYGTLVFLGHLLVALGRSIVSPHRIR--WAPIVALCERAGLDAMPIIATTTFFIGAV 179 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A GA L+ FGA++++++L+ I +RE +L+TA+++AGRS S+ AEIGSMK+N+EI Sbjct: 180 VALLGANMLTDFGAQVYAVELIGISVMREFNILITAILLAGRSASSFAAEIGSMKMNQEI 239 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA++ MG+D L+ PR AL++++PLLT +A + + G +V+W D+ F R Sbjct: 240 DAMQVMGVDPYEALVLPRFAALLLTIPLLTFVATIAGLAGGILVVWSVLDLSPTFFLQRI 299 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + + GL KAP MA I + ++G VG SLG++VT VV +I +I+ID Sbjct: 300 VDYVGATHFWIGLSKAPVMAMVIAAIGCRQGMEVGKDIESLGRRVTAAVVHAIFAIILID 359 Query: 362 SLFAIFYFAIGI 373 ++FA+ Y + I Sbjct: 360 AVFALIYMELDI 371 >gi|148925785|ref|ZP_01809473.1| putative ABC transport system permease protein [Campylobacter jejuni subsp. jejuni CG8486] gi|145845795|gb|EDK22886.1| putative ABC transport system permease protein [Campylobacter jejuni subsp. jejuni CG8486] Length = 369 Score = 284 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 112/369 (30%), Positives = 184/369 (49%), Gaps = 13/369 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 G W I ++ +A+ IQS I D + IDT G + ++ Sbjct: 11 TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKD 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + KI + +++ + LF L +++ K +K ++F +GK ++ + Sbjct: 68 KNIKITKESLNSRFQILFELCEKNYQRLGKTKKSHKNFS-----EYFIDLGKLSLELLKI 122 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G ++ + F+ ++ + + +P+VIL + + G V+A Sbjct: 123 LIKFINFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q A+QL+QFGA IF +DLM I RE+ L+ A++IAGRS S+ A+IG MKI +EI A+ Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 TMG ++ PR+ AL+I++PL+ +++ +IIG +V DI FA F RF Sbjct: 241 NTMGFRSFEFIVIPRVMALVIAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREA 300 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + +IF GL KAP IG++A GF V + S+G T VV +I VI D+LF Sbjct: 301 VDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF 360 Query: 365 AIFYFAIGI 373 ++ + GI Sbjct: 361 SVILTSTGI 369 >gi|317011599|gb|ADU85346.1| putative ABC transport system permease protein [Helicobacter pylori SouthAfrica7] Length = 377 Score = 284 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 105/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + +D SA ++D + + + Sbjct: 14 DGADSVLILRGDWDFKTSVFRLDELKKILLDH--QGPLKMDFSACQKVDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + I+L VS + ++ K+ + + Y + L +GK IV+ Sbjct: 72 KGRSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKKY---ELLITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + RFH Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRFH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 IFSIVFSKLNI 377 >gi|198282934|ref|YP_002219255.1| hypothetical protein Lferr_0798 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665617|ref|YP_002425137.1| ABC transporter, permease protein, putative [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247455|gb|ACH83048.1| protein of unknown function DUF140 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517830|gb|ACK78416.1| ABC transporter, permease protein, putative [Acidithiobacillus ferrooxidans ATCC 23270] Length = 378 Score = 284 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 94/367 (25%), Positives = 170/367 (46%), Gaps = 17/367 (4%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-FMEKYH 66 R +G W + A+ S DLSA+ +D+ GA L+ + Sbjct: 26 TLRLSGRWTLRRLGGRFAAQEAALRNI--SPEVCWDLSAVEVLDSAGALLLWRAWGNHLP 83 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 I++ + +F+ ++ + + P +G +++ D Sbjct: 84 NNIRM---ADQHHSIFARLADIQPVAARPRHPWH---------FLDQLGAFLIETGRDLW 131 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 ++G ++ G F + + G + +P++ LI F+ G VI+ Q Sbjct: 132 GLFLLMGALLLEFGRGLRHPRSFP--WREISATIVNTGPNSLPILTLIGFLIGVVISFQS 189 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A L+Q+GA I+ I++ + LRE G L+TA++++GRSGSA A+IG M + EE+DA+RT Sbjct: 190 ASTLAQYGANIYIINIAGLSILREFGPLITAIILSGRSGSAFTAQIGGMCVTEELDALRT 249 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 G+ +R LI P++ L + +PLL + + + GA +V I F + Sbjct: 250 FGIPPIRRLILPKVIGLALVMPLLVLWTDMVGLYGAMLVAKLELGISNRFFIQQMPVVVP 309 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 N++ G++K I +A G V ++ SL ++ T VV SI+++I+ID++ A+ Sbjct: 310 SFNLWLGVVKGALFGILIAWIAGFHGLKVKPNTTSLSRETTNSVVMSITVMILIDAILAL 369 Query: 367 FYFAIGI 373 + GI Sbjct: 370 VFANTGI 376 >gi|91786141|ref|YP_547093.1| hypothetical protein Bpro_0230 [Polaromonas sp. JS666] gi|91695366|gb|ABE42195.1| protein of unknown function DUF140 [Polaromonas sp. JS666] Length = 383 Score = 284 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 90/378 (23%), Positives = 186/378 (49%), Gaps = 22/378 (5%) Query: 6 ITVFRFAGNWKSP---------EISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAE 56 F G W + ++ + + + ++ + DLS + ++D +GA+ Sbjct: 18 GRRFVVRGAWTASDLTGRLVWDTLTAQLEILRRHAAPAGEASTVRWDLSGLEKLDHLGAQ 77 Query: 57 LIM-YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIG 115 ++ ++ + +++++ + ++ K + +K+L +G Sbjct: 78 VLWNHWGRDWPAQLQVE---PSQRAVLETVA-------KFAVVPPKPRGSDWKDLLVLLG 127 Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + ++ S ++G ++ + + G L +Y++G + +P+ L+ Sbjct: 128 NRALDLVDHSKGLVRLVGQLLLDIIRLVRHPKE--GPWRDLSGHLYHIGATALPITALVG 185 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 F+ G V+A + QL QFGA+ + ++++ I +RE+G +L A++IAGRSGSAI A+IG M Sbjct: 186 FLIGVVLAYLISQQLRQFGADAYIVNILGISLIRELGPVLAAILIAGRSGSAITAQIGVM 245 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 ++ EE+DA+R MG+ L+ PR AL + +PL+++ +A++G + + + Sbjct: 246 RVTEELDAMRVMGIARGFRLVMPRALALAVVMPLISVWTTIAALLGGMLAADISMGVTPS 305 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F + AN+ K+ I +V G V ++ SLG+ T VV SI+ Sbjct: 306 YFINSLPRAVDAANLTLATGKSVVFGVLIAMVGCHYGLRVKPNTESLGQGTTASVVTSIT 365 Query: 356 IVIIIDSLFAIFYFAIGI 373 +VI++D+LFA+ + ++GI Sbjct: 366 VVILVDALFAVVFKSVGI 383 >gi|186474974|ref|YP_001856444.1| hypothetical protein Bphy_0205 [Burkholderia phymatum STM815] gi|184191433|gb|ACC69398.1| protein of unknown function DUF140 [Burkholderia phymatum STM815] Length = 379 Score = 284 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 102/374 (27%), Positives = 182/374 (48%), Gaps = 14/374 (3%) Query: 4 NGITVFRFAGNWKSPEISE--IADDVVMAINKSI--QSDSAIVDLSAITEIDTIGAELIM 59 + R +G W + ++ + + + + + ++ A DLS + +D +G + + Sbjct: 15 GQGKIVRLSGQWTALALARDRLHGQALPRLRELVDSRAHVAQWDLSNVERMDHVGGQALW 74 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 Y L ++ +F I+ + +N +P R F + +G I Sbjct: 75 RVWG-YKLPRDLVALNDTQRDIFDRIALLDTVR-ENPEPVRRF------DPFTQLGLGIF 126 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 F+ + G VI + + + +Y G +P+ L++F+ G Sbjct: 127 SFVEHVYGGVAMFGRVILDLLSIARNPKL--APWKEISANVYSAGTQALPITALVAFLIG 184 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V++ A QL FGA F ++++ + LRE+G +L+A+++AGRSGSAI A+IG M++ E Sbjct: 185 IVLSYLSAQQLRLFGANQFIVNILGMSVLRELGPVLSAILVAGRSGSAITAQIGVMRVTE 244 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DA+R MG+ LI PR+ AL +++PLL + N +++G ++ I + F Sbjct: 245 ELDAMRVMGIPHGLRLILPRVIALSLAMPLLVMWTNIISLLGGALAAKLVLQIDVSYFVR 304 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 +AN++ GL K I I GF + +S SLG+ TT VV SI+IVI+ Sbjct: 305 ALPGVVPVANLWIGLGKGMVFGMLIAIAGCHFGFRIKANSQSLGEGTTTSVVSSITIVIL 364 Query: 360 IDSLFAIFYFAIGI 373 D++FAI + +G+ Sbjct: 365 ADAVFAILFQNVGL 378 >gi|182680400|ref|YP_001834546.1| hypothetical protein Bind_3500 [Beijerinckia indica subsp. indica ATCC 9039] gi|182636283|gb|ACB97057.1| protein of unknown function DUF140 [Beijerinckia indica subsp. indica ATCC 9039] Length = 376 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 126/365 (34%), Positives = 208/365 (56%), Gaps = 12/365 (3%) Query: 12 AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK- 70 G+W + + + ++ + + + + VD+ + EIDT GA L+ ++ + + K Sbjct: 21 TGSWIGAHAAAL-EPLIEGVRRDGRGRTLSVDMRGVDEIDTFGACLLERLIQSWKAEGKE 79 Query: 71 --LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + G+S L + + R + + S + G+ + D+ + Sbjct: 80 TTITGLSDRFGDLVAEVDHVSRSMSQAAAKRTS------LDSLRAFGRAAMDLWLDTRNF 133 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +LG +++ K + SL+ Q+ VG+ VP+++LI+F+ G +IAQQG F Sbjct: 134 LVVLGRLVAVFLVVLRHPKKMR--FTSLVAQLDRVGLQAVPIILLITFLIGGIIAQQGLF 191 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 +FGA+ + +DL++ L LRE+GVL+ A+M+AGRSGS+ AEIGSMK+ EEIDA+RTMG Sbjct: 192 NFRKFGADTYVVDLLAFLVLRELGVLIVAIMVAGRSGSSYTAEIGSMKMREEIDALRTMG 251 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD V +L+ PR+ AL+++LP+LT L +A+ G +V W Y + +F R A+L Sbjct: 252 LDPVEVLLLPRVLALVLALPMLTFLGFMAALYGGGVVSWIYGGMSPPIFIERIRDAASLT 311 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 GLIKAPFMA IG++A EG AV + SLG + T+ VV+SI ++I++D + +F+ Sbjct: 312 QFEVGLIKAPFMALVIGVIACTEGLAVQGSAESLGLRTTSSVVKSIFLIIVLDGILDLFF 371 Query: 369 FAIGI 373 A G+ Sbjct: 372 AATGM 376 >gi|223040212|ref|ZP_03610491.1| ABC transport system permease [Campylobacter rectus RM3267] gi|222878573|gb|EEF13675.1| ABC transport system permease [Campylobacter rectus RM3267] Length = 378 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 107/373 (28%), Positives = 188/373 (50%), Gaps = 11/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 G +W ++I A+ S + D +++ + E+D A + Sbjct: 16 QSGGKLAINLKNDWTYKLPAQIWTQT-AALIGSRKFDKIVLNFKDVKELDYAAALFLKNT 74 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + +L ++ H +++F+ I+ N K ++ +N IGK + F Sbjct: 75 LLNARKNYELVNLTPHAQRIFASINSEV-----NPKIKQIINAKPHENPLSQIGKNLAAF 129 Query: 122 INDSCSQAHILGLVISNTGE-FCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 C+ + G + + F + + K ++ G+ V +V L SF+ G Sbjct: 130 FAGFCAFLNFTGEFLVKFSKIFMLKNIRVK----EILAYFEDAGIKSVFIVCLTSFLIGI 185 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A QG+ L +FGA I +++M +L LREI L+ A+++AGR S+ A+IG MKI EE Sbjct: 186 VLAYQGSNLLERFGATIIIVEMMGLLTLREIAPLIAAIIVAGRLASSFTAQIGVMKITEE 245 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA++TMG D + L+ PR+ ALI+++PL+ LA+ + I G +V+ Y +I F + +R Sbjct: 246 IDAMKTMGFDPFKFLVLPRVIALIVAMPLIVFLADVAGIFGEMVVMENYLNIGFDSYLAR 305 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 F + +++ GL KAPF I + GF + ++ S+G T VV +I VI++ Sbjct: 306 FEQEVEIKHLYVGLFKAPFFGVVIAFIGCMRGFQISGNTQSVGTYTTVSVVNAIFGVIMV 365 Query: 361 DSLFAIFYFAIGI 373 D+LF++ + +GI Sbjct: 366 DALFSVIFTHLGI 378 >gi|188590871|ref|YP_001795471.1| hypothetical protein RALTA_A0076 [Cupriavidus taiwanensis LMG 19424] gi|170937765|emb|CAP62749.1| conserved hypothetical protein, DUF140; putative TRANSMEMBRANE PROTEIN [Cupriavidus taiwanensis LMG 19424] Length = 376 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 101/374 (27%), Positives = 181/374 (48%), Gaps = 16/374 (4%) Query: 4 NGITVFRFAGNWKSPEIS--EIADDVVMAINKSIQS-DSAIVDLSAITEIDTIGAELIMY 60 +G + G+W + ++ A + +++ Q+ D A L+ + +D IG +L+ Sbjct: 15 DGTVSVQLRGDWTALALAGCHQARQLRAQLHELAQAPDHAQWSLAGVERLDHIGGQLLW- 73 Query: 61 FMEKYHGKIKLQ-GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 + ++G + + S ++F+ I+ + K R N +G ++ Sbjct: 74 --QAWNGALPQRLEASEGQRRVFARIAAVQDEGWKKHMVDRF-------NPVTLLGANVM 124 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 F + +LG + + F +G + +Y VG + + L+ F+ G Sbjct: 125 SFGVQLGNGITMLGQLAFDLLRFARMPQ--RGPWREISANIYNVGYKALGITALVGFLIG 182 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V++ A QL FGA F ++++ + +RE+G +L A++IAGRSGSAI A+IG M++ E Sbjct: 183 IVLSYLSANQLRTFGASTFIVNILGMAVIRELGPVLAAILIAGRSGSAITAQIGVMRVTE 242 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DA+R MG+ LI PR+ AL I++PLL + A+ G + I F Sbjct: 243 ELDAMRVMGISHGFRLIMPRVIALAIAMPLLVAWTDVMALAGGMLAARMQLGISATFFLR 302 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 +AN++ GL K I + A G + ++ SLG+ T VV +I+IVI+ Sbjct: 303 ELPDAVPVANLWLGLGKGVVFGILIALTACHFGLRIKPNTQSLGEGTTASVVTAITIVIL 362 Query: 360 IDSLFAIFYFAIGI 373 D++FAI + +G+ Sbjct: 363 ADAVFAILFKDVGL 376 >gi|146305413|ref|YP_001185878.1| hypothetical protein Pmen_0373 [Pseudomonas mendocina ymp] gi|145573614|gb|ABP83146.1| protein of unknown function DUF140 [Pseudomonas mendocina ymp] Length = 379 Score = 284 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 123/373 (32%), Positives = 204/373 (54%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S + + R G+W S + V+ + VDL + +DT GA L++ Sbjct: 13 STDAASGLRIGGDWTLAHYSRLEPQVLALRERL--HGQESVDLDELAALDTAGAALLVEL 70 Query: 62 M--EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 + E+ + +ST L ++ +Q+ Q+ ++ + + HIG+ + Sbjct: 71 LGSERLRQLAQQDNLSTERRALLLAVADAMAG---SQQVQQHATPSALREVLGHIGEAVE 127 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 +GL +S +++ L SL + G++ VP+V L++F+ G Sbjct: 128 TTWCHGRELLGFMGLTLSGMLTILLRPARWR--LTSLAAHLEQCGLNAVPIVALLTFLVG 185 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 AV+A GA L+ FGA I++++L++ LRE GVLLTA+++AGR+ SA A+IGSMK NE Sbjct: 186 AVVAFLGATILADFGASIYTVNLVAFSFLREFGVLLTAILMAGRTASAFTAQIGSMKANE 245 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDAIRT+GL + +L+ PR++A++I+LP+LT +A S I+G ++V DIP ++ S Sbjct: 246 EIDAIRTLGLSPIELLVLPRVFAMLIALPILTFIAMLSGIVGGAVVCAVSLDIPLTMYMS 305 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 + L + GL+KAP A I ++ EGF V + S+G+ T+ VVQSI +VI+ Sbjct: 306 ILQDSDLLRHFLVGLLKAPIFAFLIALIGCLEGFKVSGSAQSVGEHTTSAVVQSIFVVIL 365 Query: 360 IDSLFAIFYFAIG 372 +D+L A+F +G Sbjct: 366 LDALAALFLMEMG 378 >gi|255322244|ref|ZP_05363390.1| ABC transport system permease [Campylobacter showae RM3277] gi|255300617|gb|EET79888.1| ABC transport system permease [Campylobacter showae RM3277] Length = 378 Score = 284 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 110/373 (29%), Positives = 186/373 (49%), Gaps = 11/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 G NW ++I A+ S + + +++ I E+D A Sbjct: 16 QSGGKLTINLKNNWNYKLPAQIWTQT-AALIGSKKFNKIVLNFKEIKELDYAAALFFKNT 74 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 +L ++ H +++F+ I+ N K ++ +N IGK + F Sbjct: 75 FLNACKNYELVNLTPHAQKIFASINSEI-----NPKIKQIIDAKPHENPFSQIGKNLTAF 129 Query: 122 INDSCSQAHILGLVISNTGE-FCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 C+ + G + + F + + K ++ G+ V +V L SF+ G Sbjct: 130 FAGFCAFLNFTGEFLVKFSKIFMLKNIRVK----EILAYFEDAGIKSVFIVCLTSFLIGI 185 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A QG+ L FGA I +++M +L LREI L+ A+++AGR S+ A+IG MKI EE Sbjct: 186 VLAYQGSNLLESFGATIIIVEMMGLLTLREIAPLIAAIIVAGRLASSFTAQIGVMKITEE 245 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA++TMG D + L+ PR+ ALI+++PL+ LA+ + I G +V+ Y +I F + +R Sbjct: 246 IDAMKTMGFDPFKFLVLPRVIALIVAMPLIVFLADVAGIFGEMVVMENYLNISFDSYLAR 305 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 F + +++ GL KAPF I + GF +G ++ S+G T VV +I VI++ Sbjct: 306 FSQEVDIKHLYVGLFKAPFFGIVIAFIGCMRGFQIGGNTQSVGTYTTVSVVNAIFGVIMV 365 Query: 361 DSLFAIFYFAIGI 373 D+LF+I + +GI Sbjct: 366 DALFSIIFTQLGI 378 >gi|254487283|ref|ZP_05100488.1| ABC transporter, inner membrane subunit [Roseobacter sp. GAI101] gi|214044152|gb|EEB84790.1| ABC transporter, inner membrane subunit [Roseobacter sp. GAI101] Length = 369 Score = 284 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 130/371 (35%), Positives = 211/371 (56%), Gaps = 14/371 (3%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 T +G+ + + D + + + ++D+S +T IDT GA L++Y ++ Sbjct: 10 GTRLVVSGDLRIAAV----DALDRSALLKKAAGVTVIDISGLTRIDTAGAWLLVYAQDRL 65 Query: 66 HG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++++ G S QL ++ + + ++ + +G+ + Sbjct: 66 AAPGKRVEITGTSDAQAQLIDVVRASMPPADIAEPKPKT-----LADQVETLGRMVTSGA 120 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + LG V++ +F+ L SL+ VG++ VP+V L+SF+ G V+ Sbjct: 121 RKTVELTSFLGQVVATMAGTLIHPRRFR--LTSLVHHCQEVGLNAVPIVALMSFLIGVVL 178 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL QFGAE+F +DL++I LRE+G+LLTA+++AGRSGSA A IGSMK+ EEID Sbjct: 179 AFQGAVQLRQFGAEVFVVDLIAISVLRELGILLTAIIVAGRSGSAFTAAIGSMKMREEID 238 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+RT+GLD V IL+ PR+ AL++ LP L +LA+ S ++G +++ W + AVF SR Sbjct: 239 AMRTIGLDPVTILVVPRVLALMLMLPALGLLADISGLVGGAVMSWIELGVSPAVFQSRLV 298 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + + G+IKAPF A IGI+ EG VG + SLG+ +T VV SI +VI++D+ Sbjct: 299 GNTDVWHFGVGMIKAPFFALIIGIIGCYEGMKVGGDAESLGRLTSTSVVLSIFMVIVMDA 358 Query: 363 LFAIFYFAIGI 373 +F+IF+ +G+ Sbjct: 359 MFSIFFAIVGV 369 >gi|86152962|ref|ZP_01071167.1| ABC transporter, permease [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843847|gb|EAQ61057.1| ABC transporter, permease [Campylobacter jejuni subsp. jejuni HB93-13] Length = 369 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 110/369 (29%), Positives = 184/369 (49%), Gaps = 13/369 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 G W I ++ +A+ IQS I D + IDT G + ++ Sbjct: 11 TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKD 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + KI +G+++ + LF L +++ K +K ++F +GK ++ + Sbjct: 68 KNIKITKEGLNSRFQILFELCEKNYQRLGKTKKSHKNFS-----EYFIDLGKLSLELLKI 122 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G ++ + F+ ++ + + +P+VIL + + G V+A Sbjct: 123 LIKFINFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q A+QL+QFGA IF +DLM I RE+ L+ A++IAGRS S+ A+IG MKI +EI A+ Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 TMG ++ PR+ AL++++PL+ +++ +IIG ++ DI F F RF Sbjct: 241 NTMGFRSFEFIVIPRVMALVVAMPLIVAISDAISIIGGMMIAKLNLDISFVEFLRRFREA 300 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + +IF GL KAP IG++A GF V + S+G T VV +I VI D+LF Sbjct: 301 VDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF 360 Query: 365 AIFYFAIGI 373 ++ + GI Sbjct: 361 SVVLTSAGI 369 >gi|109948194|ref|YP_665422.1| putative ABC transport system permease protein [Helicobacter acinonychis str. Sheeba] gi|109715415|emb|CAK00423.1| putative ABC transport system permease protein [Helicobacter acinonychis str. Sheeba] Length = 377 Score = 283 bits (724), Expect = 3e-74, Method: Composition-based stats. Identities = 103/371 (27%), Positives = 183/371 (49%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W + D++ + S +D S ++D + + + Sbjct: 14 DGSGSVLILGGDWDFRTSVFLLDELKKTL--SNHQGRLKMDFSRCQKVDFVFGMFLFDLI 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS ++ K + + ++ + +GK IV+ Sbjct: 72 KERSLNIELCNVSESNACALKVVRDWLEKDGNIESQK---TIKKYELVVTKMGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F L+ + G +PV IL F+ G I Sbjct: 129 NTFLNALNFCGMILFYFIKGVFNPKRF--CFTPLVYHINESGFKVLPVSILTVFIVGFAI 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 QGA QL G + ++++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 TLQGALQLQDMGVPLTTVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ ALII LPL+ +A+ AI+G+ + D+ F+ + RFH Sbjct: 247 AMKTMGFNPFEFLVLPRVLALIIVLPLMVFIADAIAILGSMCAVKYQLDLTFSSYVDRFH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 ST T + + G+IKAPF AI +V GF V + S+G+ T VV ++ +I +++ Sbjct: 307 STVTWNHFWVGIIKAPFWGFAIAVVGCMRGFEVRGDTESVGRLTTISVVNALFWIIFLNA 366 Query: 363 LFAIFYFAIGI 373 F+I + +GI Sbjct: 367 TFSIVFSRLGI 377 >gi|113866165|ref|YP_724654.1| putative uncharacterized transport protein [Ralstonia eutropha H16] gi|113524941|emb|CAJ91286.1| putative uncharacterized transport protein [Ralstonia eutropha H16] Length = 378 Score = 283 bits (724), Expect = 3e-74, Method: Composition-based stats. Identities = 102/374 (27%), Positives = 179/374 (47%), Gaps = 16/374 (4%) Query: 4 NGITVFRFAGNWKSPEIS--EIADDVVMAINKSIQS-DSAIVDLSAITEIDTIGAELIMY 60 +G G+W + ++ A + +++ Q+ DSA L+ + +D IG +L+ Sbjct: 17 DGTVSVALRGDWTALALAGCHQARQLRAQLHELAQAPDSAQWSLAGVERLDHIGGQLLW- 75 Query: 61 FMEKYHGKIKLQ-GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 + ++G + + S ++F I+ + K R N G ++ Sbjct: 76 --QAWNGALPQRLDASEGQRRVFERIAAVQNEGWKKHMVDRF-------NPITLFGANVL 126 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 F S +LG + + F +G + +Y VG + + L+ F+ G Sbjct: 127 SFGAQLRSGITMLGQLAFDLLRFAGVPQ--RGPWREISANIYNVGYKALGITALVGFLIG 184 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V++ A QL FGA F ++++ + +RE+G +L A++IAGRSGSAI A+IG M++ E Sbjct: 185 IVLSYLSANQLRTFGASTFIVNILGMAVIRELGPVLAAILIAGRSGSAITAQIGVMRVTE 244 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DA+R MG+ LI PR+ AL I++PLL + A+ G + I F Sbjct: 245 ELDAMRVMGISHGFRLIMPRVIALAIAMPLLVAWTDVMALAGGMLAARMQLGISATFFLR 304 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 +AN++ GL K I + A G + ++ SLG+ T VV +I+IVI+ Sbjct: 305 ELPDAVPVANLWLGLGKGVVFGILIALTACHFGLRIKPNTQSLGEGTTASVVTAITIVIL 364 Query: 360 IDSLFAIFYFAIGI 373 D++FA+ + +G+ Sbjct: 365 ADAVFAVLFKDVGL 378 >gi|220924819|ref|YP_002500121.1| hypothetical protein Mnod_4961 [Methylobacterium nodulans ORS 2060] gi|219949426|gb|ACL59818.1| protein of unknown function DUF140 [Methylobacterium nodulans ORS 2060] Length = 386 Score = 282 bits (723), Expect = 5e-74, Method: Composition-based stats. Identities = 126/367 (34%), Positives = 202/367 (55%), Gaps = 10/367 (2%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEKYH 66 R +G W + + + + +DLS ++ +DT+GA ++ + Sbjct: 27 RLSGRWTADQAPAVEAAAAGIAASPAGAGRIQIDLSGLSRLDTLGAWVLERTRSEIAAAG 86 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 ++ G L ++ + P R +L +G + + + Sbjct: 87 RAVEYAGARPEHRILLREVA----YREPETAPARRRGLGPV-DLLAGLGAGMRQLGAEGL 141 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 S LG V++ A F+ + + QM + + G P+++LI+F+ G ++ QQG Sbjct: 142 SWLGFLGEVVAACLRVLARPRSFRR--AAFVNQMEQIALRGTPIIMLIAFLVGCIVTQQG 199 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 QL +FGA+ F ++++ IL LRE+GVLLTA+M+AGRSGSA AEIGSM++ EE+DA+R Sbjct: 200 IIQLQRFGAQSFVVNMIGILTLRELGVLLTAIMVAGRSGSAFTAEIGSMRMREEVDALRV 259 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MGLD + ILI PRI AL+++LP+L LA+ +A+ G ++ Y ++ F +R + + Sbjct: 260 MGLDPIEILIVPRILALMMALPMLGFLADLAALAGGALTSLAYGNLSLDAFLARLQNAVS 319 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + GLIKAPFMA IGI+A EGF V + SLG+ VT VV+SI +VI++D +FAI Sbjct: 320 YRHALVGLIKAPFMALIIGIIATSEGFRVEGSAESLGRHVTASVVKSIFMVIVLDGVFAI 379 Query: 367 FYFAIGI 373 F+ AI + Sbjct: 380 FFAAIDL 386 >gi|238796784|ref|ZP_04640289.1| ABC transporter, permease protein [Yersinia mollaretii ATCC 43969] gi|238719272|gb|EEQ11083.1| ABC transporter, permease protein [Yersinia mollaretii ATCC 43969] Length = 381 Score = 282 bits (723), Expect = 5e-74, Method: Composition-based stats. Identities = 119/360 (33%), Positives = 189/360 (52%), Gaps = 4/360 (1%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72 G+W + +V+ ++ I DL+ + +DT GA L+ + + + Sbjct: 25 GDWVLAHYRALEPEVMQL--RANLPSGVIFDLNQLGALDTAGATLLALLLGEARVGNLRE 82 Query: 73 GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHIL 132 E+ L+ R + + L +IG+ +V D S + Sbjct: 83 LAPKLPEERRVLLETVSRVLPDLSPEPSTKAPPFWLELLSNIGRSMVNLWEDIKSLLGFI 142 Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 GL + +++ + SLI + +G++ VP+++L++F+ GAVIA GA L+ Sbjct: 143 GLTLEALLGTLFRPARWR--MTSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTT 200 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 FGA IF++DL+ LRE VLLTA+++AGR+ SA AEIG MK NEEIDAI+T+GL+ V Sbjct: 201 FGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPV 260 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 +L+ PR+ AL+ISLP+LT + I G +V DI +F S ++ L + Sbjct: 261 ELLVLPRVLALLISLPMLTFIGMVCGIFGGMVVCALTLDISPTMFLSIMQNSNGLQHFLV 320 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 G+ KAP A I I+ EGF V + S+G TT VV SI +VI++D++ A+F+ +G Sbjct: 321 GISKAPIFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEMG 380 >gi|298530599|ref|ZP_07018001.1| protein of unknown function DUF140 [Desulfonatronospira thiodismutans ASO3-1] gi|298509973|gb|EFI33877.1| protein of unknown function DUF140 [Desulfonatronospira thiodismutans ASO3-1] Length = 379 Score = 282 bits (722), Expect = 5e-74, Method: Composition-based stats. Identities = 93/373 (24%), Positives = 181/373 (48%), Gaps = 17/373 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 GI G ++ I + ++ + K+ ++D+ + +D G L+++F Sbjct: 21 EGILHAVVRGRMEAGSIGPLWKELASKLKKNRAG--LVLDVEKVDYMDMSGQALLLHFSR 78 Query: 64 KYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 + + ++++G+ + ++ I + Q+ + +G+ V Sbjct: 79 QMQDRNLSVEVRGLRPELREIQEEIDCFDCRPRPMQRK---------LSALEELGRAAVN 129 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 D+ +G +S+ + ++ M VG V ++ L+ F+ G Sbjct: 130 LGRDTRQFFSFVGEFVSSFAYSLTHPGTVR--WKDVLSHMEAVGGRAVFIIALMGFLIGV 187 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 +IA Q A L FGAEIF L+ + +RE+G L+T++++AGRSGSA AEIG+MK NEE Sbjct: 188 IIAFQTAITLRAFGAEIFVAKLLGLSIVRELGPLVTSIILAGRSGSAFAAEIGTMKTNEE 247 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 I+A++TMGL VR L+ PR+ A ++ PLL I + IG ++V+ D + + Sbjct: 248 INALQTMGLSPVRFLVVPRMLAAMLVTPLLCIFFLLFSFIGGALVM-LSMDFTLTTYIHQ 306 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 ++ + + ++K + + + G G ++++G+ T+ VV +I ++I+ Sbjct: 307 LKTSVGMTDFLGSMVKVFVFSILVAWIGCVRGLQTGSGASAVGRSTTSAVVSAIVLIILA 366 Query: 361 DSLFAIFYFAIGI 373 D +FA+ Y+ +GI Sbjct: 367 DGIFAVVYYMLGI 379 >gi|238789963|ref|ZP_04633742.1| ABC transporter, permease protein [Yersinia frederiksenii ATCC 33641] gi|238721911|gb|EEQ13572.1| ABC transporter, permease protein [Yersinia frederiksenii ATCC 33641] Length = 381 Score = 282 bits (722), Expect = 6e-74, Method: Composition-based stats. Identities = 122/361 (33%), Positives = 196/361 (54%), Gaps = 6/361 (1%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72 G+W S + +V ++ + I DL+ + +DT GA L+ + KL+ Sbjct: 25 GDWVLAHYSVLEPEVTQL--RANLPHAVIFDLNQLGALDTAGATLLALLLGDERIN-KLR 81 Query: 73 GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF-KNLHYHIGKKIVKFINDSCSQAHI 131 ++ + Q ++ T + +P+ S SF L + G+ + D S Sbjct: 82 ELAPKLPQERRVLLETVSHVLPGLEPESSEKPPSFWLELLANTGRSMDNLWQDIKSLLGF 141 Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +GL + +++ + SLI + +G++ VP+++L++F+ GAVIA GA L+ Sbjct: 142 VGLTLEALFGTVFRPSRWR--VTSLIANVQQIGLNAVPIIMLLTFLVGAVIAFLGATVLT 199 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 FGA IF++DL+ LRE VLLTA+++AGR+ SA AEIG MK NEEIDAI+T+GL+ Sbjct: 200 TFGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNP 259 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V +L+ PR+ AL+ISLP+LT + I G +V +I +F S ++ L + Sbjct: 260 VELLVLPRVLALLISLPMLTFIGMVCGIFGGMVVCALTLNISPTMFLSIMQNSNGLQHFL 319 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 G+ KAP A I I+ EGF V + S+G TT VV SI +VI++D++ A+F+ + Sbjct: 320 VGISKAPIFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEM 379 Query: 372 G 372 G Sbjct: 380 G 380 >gi|153209306|ref|ZP_01947341.1| ABC transporter, permease protein [Coxiella burnetii 'MSU Goat Q177'] gi|212219048|ref|YP_002305835.1| ABC transporter permease protein [Coxiella burnetii CbuK_Q154] gi|120575422|gb|EAX32046.1| ABC transporter, permease protein [Coxiella burnetii 'MSU Goat Q177'] gi|212013310|gb|ACJ20690.1| ABC transporter permease protein [Coxiella burnetii CbuK_Q154] Length = 377 Score = 282 bits (722), Expect = 6e-74, Method: Composition-based stats. Identities = 113/364 (31%), Positives = 188/364 (51%), Gaps = 13/364 (3%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAEL---IMYFMEKYHGKI 69 G+W +S + D + + K S+ I+ I ++D+ GA L ++ ++ I Sbjct: 24 GDWTVSHLSPLEDQLPLYAEKL--SEKVIIHADKIIKMDSAGALLFYTLINHLKSLGKAI 81 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 ++ G+S + + L LI + + ++ + Y +G+ V Sbjct: 82 EITGLSENAQSLLKLIGNESKFLRQPLPSSKTP------GVVYLLGEWAVTKWRVLIDFL 135 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 +G V + G+ + +++R + G +P+V L+SF+ G V+ Q A Q Sbjct: 136 TFVGEVATTAGQGILKPQ--RIQWRAILRAIEETGYQALPIVALLSFLVGVVLTYQIALQ 193 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L + A+IF +D+ LRE G L+TA++ AGR+ +A A+IG+MK+NEEIDA+ TMG+ Sbjct: 194 LDSYNADIFVVDITGAAILREFGPLITAIIAAGRTSTAFTAQIGTMKVNEEIDALNTMGV 253 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 + L+ P+I ALIISL LLT+ A+ G+ I+ DI + F RFH + + Sbjct: 254 VPIEHLVLPKIIALIISLTLLTVWADIFGTFGSMIMAKSQLDIGYLAFLDRFHHAIAVRH 313 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 GLIKAP I V +GF VG ++S+G+K T VQSI ++II D++F++ + Sbjct: 314 YIAGLIKAPVFGLIIATVGCFQGFQVGASADSVGQKTTQSAVQSIFLIIIADAIFSVIFS 373 Query: 370 AIGI 373 GI Sbjct: 374 LRGI 377 >gi|330861182|emb|CBX71439.1| hypothetical protein YEW_CA08640 [Yersinia enterocolitica W22703] Length = 381 Score = 282 bits (722), Expect = 7e-74, Method: Composition-based stats. Identities = 117/360 (32%), Positives = 186/360 (51%), Gaps = 4/360 (1%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72 G+W + V ++ Q S + DL+ + +DT GA L+ + + Sbjct: 25 GDWVLAHYRVLEPVVTQ--FRASQPQSVVFDLTQLGALDTAGATLLALLLGDERINHLRE 82 Query: 73 GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHIL 132 E+ +L+ R + + + G+ + D S + Sbjct: 83 LAPKLPEERRTLLETVSRVLPDLASESSEKPPSFWLEFLANTGRSVDNLWQDIKSLLGFV 142 Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 GL + +++ + SLI + +G++ VP+++L++F+ GAVIA GA L+ Sbjct: 143 GLTLEALFSTIFRPSRWR--MTSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTT 200 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 FGA IF++DL+ LRE VLLTA+++AGR+ SA AEIG MK NEEIDAI+T+GL+ V Sbjct: 201 FGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPV 260 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 +L+ PR+ AL+ISLP+LT + I G +V DI +F S ++ L + Sbjct: 261 ELLVLPRVLALLISLPMLTFIGMICGIFGGMVVCALALDISPTMFLSIMQNSNGLQHFLV 320 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 G+ KAP A I I+ EGF V + S+G TT VV SI +VI++D++ A+F+ +G Sbjct: 321 GISKAPIFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEMG 380 >gi|217978940|ref|YP_002363087.1| protein of unknown function DUF140 [Methylocella silvestris BL2] gi|217504316|gb|ACK51725.1| protein of unknown function DUF140 [Methylocella silvestris BL2] Length = 379 Score = 282 bits (721), Expect = 8e-74, Method: Composition-based stats. Identities = 144/370 (38%), Positives = 216/370 (58%), Gaps = 6/370 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 SE G+ + AG+W ++I + + + AI DL+ + +DT GA LI Sbjct: 14 SEEGVR-LKLAGHWTLDACADIEEGAQALVGAGAGAKHAIFDLAGVQRMDTAGAWLIDGA 72 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 ++ K + ++ L+ H + + ++ F+ L +G+ +V Sbjct: 73 RQQLDAKGVSADFAGGRPEIDILLKEAHFRSFEQPPGRKGFY---IVTLLADVGESVVAS 129 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 D LG V+++ G+ F+G +L+ Q+ + + GVP+++LI+F+ GA+ Sbjct: 130 GRDIYRGVEFLGEVVASIGKSVIQPAHFRG--TALVAQIETIALRGVPIIVLINFLVGAI 187 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +AQQG FQL +FGA I +DL+ IL LRE+GVLLTA+MI+GRSGSAI AE+GSMK+ EEI Sbjct: 188 VAQQGIFQLRRFGATILVVDLIGILILRELGVLLTAIMISGRSGSAITAELGSMKMREEI 247 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ MGL + +LI+PRI ALI+SLPLLT LA+ +A+ G +V W Y I F + Sbjct: 248 DALVVMGLRPIDVLIAPRILALILSLPLLTFLADMAALAGGILVSWLYGGITPKSFIALL 307 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 L +GLIKAPFM IG++A EG AV + SLG++VT VV+SI +VI++D Sbjct: 308 PEAIALRTFLSGLIKAPFMGLIIGLIACMEGLAVAGSAESLGRQVTASVVKSIFMVIVVD 367 Query: 362 SLFAIFYFAI 371 LFA+F+ I Sbjct: 368 GLFAVFFATI 377 >gi|327478710|gb|AEA82020.1| ABC transporter permease [Pseudomonas stutzeri DSM 4166] Length = 385 Score = 282 bits (721), Expect = 9e-74, Method: Composition-based stats. Identities = 114/369 (30%), Positives = 192/369 (52%), Gaps = 11/369 (2%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 R G+W + + +V + + + ++LS + +DT GA L++ + Sbjct: 24 LRARIVGDWTLAHYAALRREVQRLRARI--DERSQIELSGLGALDTAGAGLLVELL---- 77 Query: 67 GKIKLQGVSTHIEQLFS---LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 G ++ + QL + + T + S F + HIG+ + Sbjct: 78 GPERIAAIEAWAPQLPAERLALLRTVATALDQPDAAESPRGYEFGYVLAHIGRTVAAVWK 137 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 + +GL + +++ L SL + G+ VP+V L++F+ GAV+A Sbjct: 138 QQRALLGFIGLTLQTLLLTLPRPRRWR--LTSLAVHIEQTGLDAVPIVALLTFLVGAVVA 195 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 GA L+ FGA I++++L+ LRE GVLL A+++AGRS SA A+IGSMK NEE+DA Sbjct: 196 FLGATVLADFGATIYTVNLVGFSFLREFGVLLAAILLAGRSASAFAAQIGSMKSNEEVDA 255 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 IRT+GL + +L+ PR+ A++I+LP+LT + S I G +V DI +FF+ Sbjct: 256 IRTLGLSPIELLVLPRVLAMLITLPILTFVGMLSGIAGGLVVCVLALDISPTMFFNIMAR 315 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +++ GL KAP A I ++ EGF V + S+G+ T+ VVQ+I +VI++D++ Sbjct: 316 DIAVSHFLVGLGKAPVFAFVIAVIGCLEGFKVSGSAQSVGEHTTSSVVQAIFMVILLDAI 375 Query: 364 FAIFYFAIG 372 A+F+ +G Sbjct: 376 AALFFMEMG 384 >gi|123441584|ref|YP_001005570.1| ABC transporter, membrane permease [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088545|emb|CAL11339.1| ABC transporter, membrane permease [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 381 Score = 281 bits (720), Expect = 9e-74, Method: Composition-based stats. Identities = 117/360 (32%), Positives = 186/360 (51%), Gaps = 4/360 (1%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72 G+W + V ++ Q S + DL+ + +DT GA L+ + + Sbjct: 25 GDWVLAHYRVLEPVVTQ--FRASQPQSVVFDLTQLGALDTAGATLLALLLGDERINHLRE 82 Query: 73 GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHIL 132 E+ +L+ R + + + G+ + D S + Sbjct: 83 LAPKLPEERRTLLETVSRVLPDLASESSEKPPSFWLEFLANTGRSVDNLWQDIKSLLGFV 142 Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 GL + +++ + SLI + +G++ VP+++L++F+ GAVIA GA L+ Sbjct: 143 GLTLEALFSTIFRPSRWR--MTSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTT 200 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 FGA IF++DL+ LRE VLLTA+++AGR+ SA AEIG MK NEEIDAI+T+GL+ V Sbjct: 201 FGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPV 260 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 +L+ PR+ AL+ISLP+LT + I G +V DI +F S ++ L + Sbjct: 261 ELLVLPRVLALLISLPMLTFIGMICGIFGGMVVCALALDISPTMFLSIMQNSNGLQHFLV 320 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 G+ KAP A I I+ EGF V + S+G TT VV SI +VI++D++ A+F+ +G Sbjct: 321 GISKAPIFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEMG 380 >gi|119897565|ref|YP_932778.1| putative ABC transporter permease [Azoarcus sp. BH72] gi|119669978|emb|CAL93891.1| putative ABC transporter permease protein [Azoarcus sp. BH72] Length = 380 Score = 281 bits (720), Expect = 1e-73, Method: Composition-based stats. Identities = 127/372 (34%), Positives = 206/372 (55%), Gaps = 5/372 (1%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 ++ G V R +G+W IAD V A+ ++Q +A VD S + +DT GA L++ Sbjct: 13 LAAAGGGVLRLSGDWTLAHYRSIAD-TVSALRANVQHGTA-VDASGLGALDTAGASLLVQ 70 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 + + G L + +L+ +P+ + ++ ++ HIG + Sbjct: 71 LLG-HDGLQALSTDPALAPERRALLRAVADALATPPEPEPADTGSALGDVLEHIGIAMGV 129 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 F + +GL + + A +++ L +L + + VP+V L++F+ GA Sbjct: 130 FWRHAVGLLGFIGLTLESAFRIIAQPARWR--LTALAANLEKTALDAVPIVALLTFLVGA 187 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A GA L+ FGA IF++DL++ LRE GVLLTA+++AGR+ SA A+IGSMK NEE Sbjct: 188 VVAFLGATVLADFGASIFTVDLVAFSFLREFGVLLTAILVAGRTASAFTAQIGSMKANEE 247 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDAIR +GLD V +L+ PR++AL+++LP+LT +A S I+G +V DI +F S Sbjct: 248 IDAIRVLGLDPVELLVLPRVYALLLALPMLTFVAMLSGIVGGMLVCALTLDISPVMFLSI 307 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 F + L + G+ KAP A I ++ EGF V + S+G+ T+ VVQSI +VI++ Sbjct: 308 FENDVGLRHFIVGIAKAPIFAFLIAVIGCLEGFKVSGSAQSVGEHTTSAVVQSIFVVIVV 367 Query: 361 DSLFAIFYFAIG 372 D++ A+ +G Sbjct: 368 DAVAALLCMELG 379 >gi|304319773|ref|YP_003853416.1| hypothetical protein PB2503_00972 [Parvularcula bermudensis HTCC2503] gi|303298676|gb|ADM08275.1| hypothetical protein PB2503_00972 [Parvularcula bermudensis HTCC2503] Length = 380 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 131/366 (35%), Positives = 200/366 (54%), Gaps = 11/366 (3%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72 G W D + A+N + D A +DLS I +DT GA ++ + G+ + Q Sbjct: 21 GEWTLRGGLTKIDSKIRALNFGPREDLAEIDLSQIEALDTAGALMLQRLRHRCMGEGRPQ 80 Query: 73 GVST-----HIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 ++T + H + P+R SF L +G+ + N+ + Sbjct: 81 AIATLTGMTDPQHELMERMAAHIADCEGDPPRRK----SFILLLNRVGQGTIAVGNEGLA 136 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +G V++ S +F+ L + + M G++ +V L+SF+ GAV+A GA Sbjct: 137 ILSFVGSVVARLAGTIMSPARFR--LTATVAHMEEAGLNSTLIVGLMSFLIGAVVAFMGA 194 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 LS+FGAE+FS++L+ I LRE GVLLTA++IAGRSGSA A IGSMK+ EEIDA+R + Sbjct: 195 RVLSEFGAEVFSVELVGISVLREFGVLLTAILIAGRSGSAFTASIGSMKLREEIDAMRAL 254 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ + LI PR AL+++LP+L LA F ++G +V W DIP +F R T+ Sbjct: 255 GISPLDALILPRTIALVLTLPVLAFLAGFLGLLGGGVVGWLALDIPPQLFIGRLQEIVTV 314 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 N+F GL+KAPF A I +V G +V + LG++ T VVQS+ +VI++D+LFA+ Sbjct: 315 ENLFVGLVKAPFFAFVIAVVGCYHGMSVENSAEELGRRTTMAVVQSLFLVILLDALFAML 374 Query: 368 YFAIGI 373 + + I Sbjct: 375 FLELDI 380 >gi|157736379|ref|YP_001489062.1| ABC transporter, permease protein [Arcobacter butzleri RM4018] gi|157698233|gb|ABV66393.1| ABC transporter, permease protein [Arcobacter butzleri RM4018] Length = 370 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 107/365 (29%), Positives = 182/365 (49%), Gaps = 12/365 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 W + I + + ++ +D + + E D+ ++ F+ + K Sbjct: 18 LTLLNIWNKQTLPNIIKKIE--LLNFSKNSKLNIDFANLKECDSSAIIYLISFLNTFEEK 75 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + + E++F ++ K+ ++ + FF +GKK +S Sbjct: 76 NITILNNKNHEKIFDFYKKHYQTKVLEEEKKNLFF--------EDLGKKSYDIYKESKEF 127 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G V + K + ++++ + + +V + SF+ G VIA QG+ Sbjct: 128 IGFIGKVFYFFIYAIFNPSKIR--FKAMLKYIETSAFDALLIVAVTSFLVGVVIAYQGSV 185 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 QL +FGA IF ++++SI REI L+TA++IAGRS S+ AEIG+MKI EEIDA++TM Sbjct: 186 QLEKFGANIFIVEMISITIFREIAPLVTAIVIAGRSASSYTAEIGAMKITEEIDAMKTMN 245 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + L PRI+AL ISLPLL A+ + G ++ D+ F F +R H+ L Sbjct: 246 FEPTLFLTLPRIFALCISLPLLVFFADIIGVFGGMVIASSSLDVTFIEFINRLHNEVPLK 305 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 ++ G+ KA F AI I+ GF V ++ S+GK T VV +I +VI+ID++F++ + Sbjct: 306 HLILGVFKALFFGFAIAIIGCYRGFQVQNNTTSIGKFTTMSVVNAIFVVILIDAVFSVIF 365 Query: 369 FAIGI 373 +GI Sbjct: 366 TQMGI 370 >gi|238764189|ref|ZP_04625142.1| ABC transporter, permease protein [Yersinia kristensenii ATCC 33638] gi|238697602|gb|EEP90366.1| ABC transporter, permease protein [Yersinia kristensenii ATCC 33638] Length = 381 Score = 280 bits (718), Expect = 2e-73, Method: Composition-based stats. Identities = 116/360 (32%), Positives = 185/360 (51%), Gaps = 4/360 (1%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72 G+W ++ V ++ S + DL+ + +DT GA L+ + + Sbjct: 25 GDWVLAHYRDLEPVVAQ--FRTNPPPSVVFDLNQLGALDTAGATLLALLLGESRINNLRD 82 Query: 73 GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHIL 132 E+ L+ R + L + G+ + D S + Sbjct: 83 LAPKLPEERRILLETVSRVLPDLTAASSEKLPPFWLELLANTGRSVDNLWQDIKSLLGFV 142 Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 GL + +++ + SLI + +G++ VP+++L++F+ GAVIA GA L+ Sbjct: 143 GLTLEALFSTIFRPSRWR--MTSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTT 200 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 FGA IF++DL+ LRE VLLTA+++AGR+ SA AEIG MK NEEIDAI+T+GL+ V Sbjct: 201 FGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPV 260 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 +L+ PR+ AL++SLP+LT + I G +V DI +F S ++ L + Sbjct: 261 ELLVLPRVLALLVSLPMLTFIGMVCGIFGGMVVCALTLDISPTMFLSIMQNSNGLQHFLV 320 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 G+ KAP A I I+ EGF V + S+G TT VV SI +VI++D++ A+F+ +G Sbjct: 321 GISKAPIFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEMG 380 >gi|312797432|ref|YP_004030354.1| ABC transporter permease protein [Burkholderia rhizoxinica HKI 454] gi|312169207|emb|CBW76210.1| ABC transporter permease protein [Burkholderia rhizoxinica HKI 454] Length = 390 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 95/371 (25%), Positives = 172/371 (46%), Gaps = 18/371 (4%) Query: 9 FRFAGNWKSPEISEIADD-----VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 R G W + ++ + + + + DLS I +D +GA+ + Sbjct: 31 IRLGGQWTALSLALDQRRGGIAAKLRTLRDAAARADTLWDLSPIQRLDHVGAQALWQIWG 90 Query: 64 K-YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + + L I + +L+ T + + +G + F Sbjct: 91 RHLPCGLSLTDTQREIFERIALLDATREPAEPA----------AAIDPITRLGLAVFGFA 140 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 +LG ++ + G + + +Y G +P+ L++F+ G V+ Sbjct: 141 GHLRDGITLLGGLVIDCGRLLRDPRRIP--WSEISANVYAAGAQALPITALVAFLIGIVL 198 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + A QL FGA + ++++ + +RE+G +L A+++AGRSGSAI A++G M++ EE+D Sbjct: 199 SYLSAQQLRLFGANAYIVNILGLSIIRELGPVLAAILVAGRSGSAITAQLGVMRVTEELD 258 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R MG+ LI PR+ AL +++PLL I + A+ G + +I + F Sbjct: 259 AMRVMGISHGLRLILPRVIALGVAMPLLVIWTDAIALAGGMLAAQLVLNIDMSFFIRSLP 318 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 S +AN++ GL K I +V G + +S SLG+ TT VV SI++V++ D+ Sbjct: 319 SVVPVANLYLGLGKGVAFGMLIALVGCHFGLRIKPNSQSLGEGTTTSVVSSITVVMLADA 378 Query: 363 LFAIFYFAIGI 373 +FAI + IG+ Sbjct: 379 VFAIMFQRIGL 389 >gi|218780630|ref|YP_002431948.1| hypothetical protein Dalk_2788 [Desulfatibacillum alkenivorans AK-01] gi|218762014|gb|ACL04480.1| protein of unknown function DUF140 [Desulfatibacillum alkenivorans AK-01] Length = 377 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 97/369 (26%), Positives = 178/369 (48%), Gaps = 12/369 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++ ++ R G +A + AI K + ++DL +T +D GA L+ + Sbjct: 13 NDGKGSILRLHGPLDQDAYFALAGPLRQAIKKGC-AGELVIDLKDVTRLDDFGALLLAHV 71 Query: 62 MEKYHG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + H ++ + ++ L+ F + + +N +G I Sbjct: 72 HKAAHAVNSPCSIEAARPSVREVLDLLHFQRLINAPALEKPKH------ENPFVALGGAI 125 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + + + G V+ + + ++ M VGV VP+V LI+F+ Sbjct: 126 IDKVLGAKELIDFTGDVLLCAAIVVRHPFSMR--WDDMLTAMRKVGVDAVPIVGLINFLL 183 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G ++A + QL QFGA I+ L++I +RE+G ++TA+++ GRSGSA +EIG+MKI+ Sbjct: 184 GFIMAFMTSVQLKQFGANIYVAPLVAIAMVRELGPIMTAIVVTGRSGSAFASEIGAMKIS 243 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE+DA+ TMG + V L+ P++ A +I +P+LT+ A I+G +V + D+ + + Sbjct: 244 EEVDALSTMGFNPVVFLVMPKMTAAMIVMPILTVFACLFGILGGLLVGVVFLDLTLSNYL 303 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 S + ++ + KA A I + GF V S+++G+ T+ VV I ++I Sbjct: 304 SETIDSLSMYAVNWCFFKAVVFAFLITWIGCLRGFQVKGGSSAVGEATTSSVVSGIFLII 363 Query: 359 IIDSLFAIF 367 + D +FA Sbjct: 364 LWDCIFAFI 372 >gi|238751983|ref|ZP_04613468.1| ABC transporter, permease protein [Yersinia rohdei ATCC 43380] gi|238709817|gb|EEQ02050.1| ABC transporter, permease protein [Yersinia rohdei ATCC 43380] Length = 381 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 120/361 (33%), Positives = 198/361 (54%), Gaps = 6/361 (1%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72 G+W E+ V ++ + DL+ + +DT GA L+ + + L+ Sbjct: 25 GDWVLVHYRELEPQVAQL--RANLPHGVVFDLNQLGALDTAGAALLAVLLGEERIS-HLR 81 Query: 73 GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF-KNLHYHIGKKIVKFINDSCSQAHI 131 ++ ++ Q ++ T + + N +P+ + +F L G+ + D S Sbjct: 82 ELAPNLPQERRVLLETVSQVLPNIEPESTEKPPAFWLELLAGTGRTVDNLWQDIKSLLGF 141 Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +GL + +++ + SLI + +G++ VP+++L++F+ GAVIA GA L+ Sbjct: 142 VGLTLETLLGTLFRPSRWR--VTSLIANVQQIGLNAVPIIMLLTFLVGAVIAFLGATVLT 199 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 FGA IF++DL+ LRE VLLTA+++AGR+ SA AEIG MK NEEIDAI+T+GL+ Sbjct: 200 TFGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNP 259 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V +L+ PR+ AL+ISLP+LT + I G +V +I +F S ++ L + Sbjct: 260 VELLVLPRVLALLISLPMLTFIGMVCGIFGGMVVCALELNISPTMFLSIMQNSNGLQHFL 319 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 G+ KAP A I I+ EGF V + S+G+ TT VVQSI +VI++D++ A+F+ + Sbjct: 320 VGISKAPIFAFLIAIIGCLEGFKVTGSAESVGEHTTTSVVQSIFVVILLDAIAALFFMEM 379 Query: 372 G 372 G Sbjct: 380 G 380 >gi|34558310|ref|NP_908125.1| toluene ABC transporter permease [Wolinella succinogenes DSM 1740] gi|34484029|emb|CAE11025.1| conserved hypothetical protein-ABC-type toluene export system, permease component [Wolinella succinogenes] Length = 366 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 101/375 (26%), Positives = 189/375 (50%), Gaps = 20/375 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLS--AITEIDTIGAELI 58 + + + G W E+ +++ + + + DS V +S ++ +D A L+ Sbjct: 4 IERDLMLRLILRGQWDY----ELPKELISRLFLACKRDSVRVSVSLLGVSSLDYSAATLL 59 Query: 59 MYF---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIG 115 + +++ G+ +GV I + ++ + R + +G Sbjct: 60 LELSMAVKRRGGEWAWEGVPPAIAPILGIVKESKRDLPAPPPS---------LSSLLRLG 110 Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +KI + + A LG + G S + L + + + G+ VP++ L S Sbjct: 111 EKIKESLKGLGRFASFLGETLFAMGRSLKESRLIR--LKATLYHIEESGIKAVPIIALTS 168 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 F+ G V+A QGA QL +FGA I +++ +L LRE+G ++ A+++AGRS S+ A+IG M Sbjct: 169 FLVGIVMAYQGAIQLEKFGASIIVVEMTGMLTLRELGPVIAAIVVAGRSASSYAAQIGVM 228 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 KI EEIDA++TM + L+ PR+ AL++ +PL+ L+N + ++G ++I Y I + Sbjct: 229 KITEEIDAMKTMNFNPYAFLVIPRVIALVVVMPLVIFLSNVAGLLGEMLIIKSYLGIGYL 288 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + RF+ + +++ GLIKAPF I ++ GF + + S+G+ T VV +I Sbjct: 289 QYIERFYEMVEIRHLWVGLIKAPFYGAIIALIGCFRGFQITGSTESVGRYTTISVVNAIF 348 Query: 356 IVIIIDSLFAIFYFA 370 VI ++++F+I + Sbjct: 349 WVIALNAMFSIIFTE 363 >gi|304391808|ref|ZP_07373750.1| ABC transporter, membrane spanning protein [Ahrensia sp. R2A130] gi|303296037|gb|EFL90395.1| ABC transporter, membrane spanning protein [Ahrensia sp. R2A130] Length = 385 Score = 280 bits (717), Expect = 3e-73, Method: Composition-based stats. Identities = 133/368 (36%), Positives = 212/368 (57%), Gaps = 7/368 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G+ V +G W I E+ DD+ S +++ +A T++DT GA LI + Sbjct: 23 DGVLV-TASGPWTIAFIEEVDDDI--RAFSIEGSAKLVLNTTAATQLDTSGAWLIERLRQ 79 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + + L+ HR+ + + S++ +G+ ++F Sbjct: 80 RVEEAGIAFSHEDDEPRRQQLVDVIHRR--ERPETDAPTQTKSWRGPIVRLGEIGIEFGR 137 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 D + +ILG + S + ++S++ Q+ +G VPVV ++SF+ GA+IA Sbjct: 138 DLMTALYILGSSVRGPSSNGGSGRGLR--VMSILNQIDQMGWRAVPVVFVMSFLIGAIIA 195 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 QQGA+Q+ +G E+ +I L+ IL RE+GVLLT++M+AGRSGSAI AEIG+MK+ EEIDA Sbjct: 196 QQGAYQMQAYGEELLAISLVGILHFREVGVLLTSIMVAGRSGSAITAEIGTMKMREEIDA 255 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 ++ MGL+ V +L+ PR+ A++I LP+LT+L+N + I+GA +V+ Y I + F + Sbjct: 256 LQVMGLNPVGVLLFPRLLAIMICLPILTLLSNIAGIMGAMVVMDIYVGITPSQFITTLTE 315 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++ GL KAP MA IG+VA EG VG S SLG++ T VV+SI +VI++D L Sbjct: 316 DISPRHLAVGLAKAPVMALIIGLVAAVEGLKVGGSSESLGQRTTAAVVKSIFLVIVVDGL 375 Query: 364 FAIFYFAI 371 F IF+ A+ Sbjct: 376 FTIFFSAM 383 >gi|15965586|ref|NP_385939.1| hypothetical protein SMc00174 [Sinorhizobium meliloti 1021] gi|307302706|ref|ZP_07582462.1| protein of unknown function DUF140 [Sinorhizobium meliloti BL225C] gi|307318554|ref|ZP_07597988.1| protein of unknown function DUF140 [Sinorhizobium meliloti AK83] gi|15074767|emb|CAC46412.1| Probable ABC transporter [Sinorhizobium meliloti 1021] gi|306895894|gb|EFN26646.1| protein of unknown function DUF140 [Sinorhizobium meliloti AK83] gi|306903070|gb|EFN33661.1| protein of unknown function DUF140 [Sinorhizobium meliloti BL225C] Length = 379 Score = 280 bits (716), Expect = 3e-73, Method: Composition-based stats. Identities = 153/370 (41%), Positives = 218/370 (58%), Gaps = 10/370 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + + F+G+W+ +A + + + D S IT +DT GA +I F Sbjct: 18 AAGNGRRYVFSGDWRHETAEAMAAKLKRLEKPA--GGQSEFDFSGITRMDTAGAWIIRRF 75 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 M +++ G + E + +L R + + + F+ L +G+ V Sbjct: 76 MNGTADEVRFTGGERYAELVRALPKQLRRPE------ESATRMPLFQRLFTPVGELTVSI 129 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 D+ + ILG + G +++ Q+ +GV P++ L+SF+ GA+ Sbjct: 130 WTDTVAAMFILGSAVR--GAQMKLGRHAGVSPAAIVHQIDRMGVMATPIITLMSFLIGAI 187 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IAQQGAFQL FGAEIF +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EE+ Sbjct: 188 IAQQGAFQLRSFGAEIFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREEV 247 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA++ MGL V +L+ PR+ AL I LPLLTI+ANF+A+ GA++V W Y DI F +R Sbjct: 248 DALKVMGLSPVGVLVFPRLVALTIVLPLLTIIANFAALAGAAMVAWTYSDITIPTFLARL 307 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 +++ G+IKAPFMA IG+VA EG VG + SLG++VT+ VV+SI +VI+ID Sbjct: 308 QEAVDFSSVAAGMIKAPFMALIIGVVAAVEGLKVGGSAESLGRRVTSSVVKSIFVVILID 367 Query: 362 SLFAIFYFAI 371 LFA+FY AI Sbjct: 368 GLFAMFYAAI 377 >gi|256828281|ref|YP_003157009.1| protein of unknown function DUF140 [Desulfomicrobium baculatum DSM 4028] gi|256577457|gb|ACU88593.1| protein of unknown function DUF140 [Desulfomicrobium baculatum DSM 4028] Length = 380 Score = 280 bits (716), Expect = 3e-73, Method: Composition-based stats. Identities = 105/356 (29%), Positives = 184/356 (51%), Gaps = 17/356 (4%) Query: 16 KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEKYHGKIKLQ 72 +PEI + + + + + I++ DLS +T +D GA +I+ EK +K+ Sbjct: 34 TTPEIMDRLAQLPLPLPRRIRA-----DLSGVTRMDDCGALVILQLRRMAEKNGCDLKMH 88 Query: 73 GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHIL 132 G H+++L + PQ + + G K + N + + + Sbjct: 89 GTPGHVQELLDFLRLDD-------PPQSVGIKRAKPDFMTRFGIKTLDVTNQAVTHVSFV 141 Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G V+ + + L + M VGV +P+V LISF+ G ++A A QL Q Sbjct: 142 GEVVVTLLSLLRHPDRLR--LGDTVLYMQRVGVDALPIVGLISFLLGLIMAFMSAVQLQQ 199 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 FGA I+ L+++ +RE+G ++TA+++AGRSGSA AEIG+MK++EE+DA+ TMG Sbjct: 200 FGANIYVASLVALAMVRELGPIMTAILVAGRSGSAFAAEIGTMKVSEEVDALVTMGFKPA 259 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 L++P+I A ++ +PLL + +N AI G ++ D+ + ++ +T ++ +I Sbjct: 260 MFLVAPKIIASVLVVPLLAMYSNLFAIAGGLLIGVTTLDLTVNAYMAQTMNTLSIFDINW 319 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 GL K+ A I V +G+ V + S+G+ T+ VV I +VI++DS+ A+ Sbjct: 320 GLFKSAIFAVLIATVGCFKGYQVRGGAASVGQATTSAVVTGIFLVILVDSILAVIL 375 >gi|285019443|ref|YP_003377154.1| ABC transporter permease [Xanthomonas albilineans GPE PC73] gi|283474661|emb|CBA17160.1| probable abc transporter permease protein [Xanthomonas albilineans] Length = 405 Score = 279 bits (714), Expect = 5e-73, Method: Composition-based stats. Identities = 119/366 (32%), Positives = 197/366 (53%), Gaps = 13/366 (3%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 + R G+W V + +S+ + + +D S I ++D+ G ++ + + Sbjct: 52 SRVRLTGSWTLSTAL-----VASEVLRSMPAGTTGIDASGIAQLDSAGVLQLIRYATRNG 106 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 + L S I + + +P+R Y F +G + + + Sbjct: 107 IAQESLDFRQDHRALVSTIE-----DVADDRPKRKRDYG-FAAALERLGYTVHRNGKEIV 160 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + LG + + +F+ L S + M VG+ VP+V L+S++ GAVIA G Sbjct: 161 ALVGFLGETLVKLMRLMHAPRRFR--LTSTVHHMEQVGLDAVPLVALLSYLVGAVIAFLG 218 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 + L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EEIDAI+T Sbjct: 219 STVLRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKAREEIDAIQT 278 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +GLD + +L+ PR+ AL++ LPLLT +A + + G V IP ++ +R H T Sbjct: 279 LGLDPMDLLVIPRLLALLLMLPLLTFVAMIAGLAGGVTVGAFDLGIPPQMYLARMHDTIQ 338 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + ++ GL KAP A AIG++ EG V + S+G++ T+ VVQ+IS+VIIID++ A+ Sbjct: 339 IRHMLVGLAKAPIFAIAIGLIGCLEGLRVEGTAQSVGERTTSSVVQTISLVIIIDAIAAL 398 Query: 367 FYFAIG 372 ++ +G Sbjct: 399 WFMKMG 404 >gi|330501346|ref|YP_004378215.1| hypothetical protein MDS_0432 [Pseudomonas mendocina NK-01] gi|328915632|gb|AEB56463.1| hypothetical protein MDS_0432 [Pseudomonas mendocina NK-01] Length = 381 Score = 279 bits (714), Expect = 5e-73, Method: Composition-based stats. Identities = 120/373 (32%), Positives = 201/373 (53%), Gaps = 9/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S + + R G+W S++ V+ + VDL + +DT GA L++ Sbjct: 15 STDAASGLRLGGDWTLAHYSQLEPQVLALRERL--HGKESVDLGDLAALDTAGAALLVEL 72 Query: 62 M--EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 E+ I+ + L ++ Q + + + + HIG+ + Sbjct: 73 FGSERLRQLIQQAELDERRRALLLTVADAMAGSAPAQA---ASEPSVLREVLGHIGEVVE 129 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + + +GL +++ +++ L SL + G++ VP+V L++F+ G Sbjct: 130 GMWHQGRALLGFMGLTLTSMLAILVRPMRWR--LTSLAAHLEQCGLNAVPIVALLTFLVG 187 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 AV+A GA L+ FGA I++++L++ LRE GVLLTA+++AGR+ SA A+IGSMK NE Sbjct: 188 AVVAFLGATILADFGATIYTVNLVAFSFLREFGVLLTAILMAGRTASAFTAQIGSMKANE 247 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDAIRT+GL + +L+ PR++A++I+LP+LT +A S I+G +V DIP ++ S Sbjct: 248 EIDAIRTLGLSPIELLVLPRVFAMLIALPILTFIAMLSGIVGGGLVCAVSLDIPVTMYLS 307 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 + L + GL+KAP A I ++ EGF V + S+G+ T+ VVQSI +VI+ Sbjct: 308 ILQDSDLLRHFLVGLLKAPIFAFLIALIGCLEGFKVSGSAQSVGEHTTSAVVQSIFVVIL 367 Query: 360 IDSLFAIFYFAIG 372 +D+L A+F +G Sbjct: 368 LDALAALFLMEMG 380 >gi|298292077|ref|YP_003694016.1| hypothetical protein Snov_2101 [Starkeya novella DSM 506] gi|296928588|gb|ADH89397.1| protein of unknown function DUF140 [Starkeya novella DSM 506] Length = 382 Score = 279 bits (714), Expect = 5e-73, Method: Composition-based stats. Identities = 129/372 (34%), Positives = 202/372 (54%), Gaps = 12/372 (3%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAIN--KSIQSDSAIVDLSAITEIDTIGAEL---IMYF 61 VF G W + + + V A+ K ++A +DLS + DT+GA + ++ Sbjct: 18 LVFVGNGRWVAGQGRALEGGVDTALAELKVGAVETARLDLSGVRGFDTVGAVMVDRLLRA 77 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 +E + ++ G+ L I K + P R N+ +G+ +V Sbjct: 78 LEVAGVRFQIVGLERRFRPLLDEI-----VKGSHDVPPRRHHVNAVIGGIQLVGQTVVNT 132 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 DS +G V++ F+G S++ + G+ VP++ LI+F+ G + Sbjct: 133 GRDSLVFLSFIGAVVAALLRVIVRPQTFRG--TSMVYHLERTGLRAVPIIALITFLIGCI 190 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IAQQG F +FGA + +D++ IL LRE+GVL+ ++M+AGRSGSA AE+GSM++ EE+ Sbjct: 191 IAQQGIFHFRKFGATTYVVDMVGILTLRELGVLIVSIMVAGRSGSAFTAELGSMRMREEV 250 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+R MG D +L+ PR+ ALII++PLLT + N A+ G +V W Y I +F +R Sbjct: 251 DALRVMGFDPNEVLVLPRLVALIIAVPLLTFIGNMCALFGGGLVAWLYGGISPEIFLNRL 310 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 L G+IKAPFMA +G++A EG VG + SLG T VV++I +VI++D Sbjct: 311 QEAIALNTFEVGMIKAPFMAAIVGLIACMEGMRVGGSAESLGAHTTAAVVKAIFLVIVVD 370 Query: 362 SLFAIFYFAIGI 373 LFA+F+ AI + Sbjct: 371 GLFAMFFAAIDM 382 >gi|311694463|gb|ADP97336.1| ABC transporter, permease protein [marine bacterium HP15] Length = 388 Score = 279 bits (713), Expect = 6e-73, Method: Composition-based stats. Identities = 105/365 (28%), Positives = 187/365 (51%), Gaps = 5/365 (1%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 G+W ++ ++ + ++LS +T IDT GA + + Sbjct: 28 TLSVNGDWLLSHYRSLSSLASSMSSRDL--IKLSINLSGLTRIDTAGASQLASLIGPERL 85 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 S + +LI+ +KNQ + + G+K+ Sbjct: 86 LEAASADSELPRETSALIAAVCE-AMKNQPEADRRSPSLVWSFVTGTGQKVESIFRLLWI 144 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +G + ++++ + + ++ G++ +P+V L++F+ GAV+A GA Sbjct: 145 LVGFIGQTLGTLAWNLPRPWRWR--MTPFVAAVHDTGLNALPIVALLTFLVGAVVAFLGA 202 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L FGA I++++L++ LRE GVLL A+++AGR+ SA A IG+MK+NEE+DAIRT+ Sbjct: 203 TVLDDFGATIYTVNLVAFSFLREFGVLLAAILLAGRTASAFTAHIGAMKVNEELDAIRTL 262 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GL+ + +L+ PR+ A+++SLP+LT + S ++G ++V DI F + L Sbjct: 263 GLNPIELLVLPRVMAMMVSLPILTFVGMISGMVGGAMVCALVLDITPTQFMAIVERDIAL 322 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + G++KAP A I ++ EGF V + S+G+ T+ VVQSI +VI++DS+ A+F Sbjct: 323 QHFVVGIVKAPIFAFLIAVIGCLEGFKVAGSAQSVGEHTTSSVVQSIFMVILLDSIAALF 382 Query: 368 YFAIG 372 + +G Sbjct: 383 FMEMG 387 >gi|300917987|ref|ZP_07134613.1| conserved hypothetical protein [Escherichia coli MS 115-1] gi|300414813|gb|EFJ98123.1| conserved hypothetical protein [Escherichia coli MS 115-1] Length = 381 Score = 279 bits (713), Expect = 6e-73, Method: Composition-based stats. Identities = 114/365 (31%), Positives = 189/365 (51%), Gaps = 6/365 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 G+W + V ++ + DL+ + +DT ++ + Sbjct: 21 VYIRGDWVLAHYCVLEPRVAQL--RANMPSGGVFDLNQLGALDTA-GATLLALLLGEDRV 77 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF-KNLHYHIGKKIVKFINDSCS 127 L+ ++ + + ++ T + + P+ S F + + G+ + D S Sbjct: 78 ANLRELAPKLPEERRILLETVSHVLPDLTPELSEKPTRFWLEMLANTGRSVDNLWQDIKS 137 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +GL + +++ + SLI + +G++ VP+++L++F+ GAVIA GA Sbjct: 138 LLGFIGLALETLLGTLFRPSRWR--ITSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGA 195 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L+ FGA IF++DL+ LRE VLLTA+++AGR+ SA AEIG MK NEEIDAI+T+ Sbjct: 196 TVLTTFGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTL 255 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GL+ V +L+ PR+ AL+ISLP+LT + I G +V DI +F S ++ L Sbjct: 256 GLNPVELLVLPRVLALLISLPMLTFIGMVCGIFGGMVVCALTLDISPTMFLSIMQNSNGL 315 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + G+ KAP A I I+ EGF V + S+G TT VV SI +VI++D++ A+F Sbjct: 316 QHFLVGISKAPIFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALF 375 Query: 368 YFAIG 372 + +G Sbjct: 376 FMEMG 380 >gi|238791990|ref|ZP_04635626.1| ABC transporter, permease protein [Yersinia intermedia ATCC 29909] gi|238728621|gb|EEQ20139.1| ABC transporter, permease protein [Yersinia intermedia ATCC 29909] Length = 381 Score = 278 bits (712), Expect = 8e-73, Method: Composition-based stats. Identities = 115/367 (31%), Positives = 186/367 (50%), Gaps = 10/367 (2%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EKY 65 G+W + V ++ + DL+ + +DT GA L+ + Sbjct: 21 VYIRGDWVLAHYCVLEPRVAQL--RANMPSGGVFDLNQLGALDTAGATLLALLLGEDRVA 78 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 + + + L +S + + F + + + G+ + D Sbjct: 79 NLRELAPKLPEERRILLETVSHVLPDLTPELSEKPARF---WLEMLANTGRSVDNLWQDI 135 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 S +GL + +++ + SLI + +G++ VP+++L++F+ GAVIA Sbjct: 136 KSLLGFIGLALETLLGTLFRPSRWR--ITSLIANIQQIGLNAVPIIMLLTFLVGAVIAFL 193 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 GA L+ FGA IF++DL+ LRE VLLTA+++AGR+ SA AEIG MK NEEIDAI+ Sbjct: 194 GATVLTTFGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQ 253 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 T+GL+ V +L+ PR+ AL+ISLP+LT + I G +V DI +F S ++ Sbjct: 254 TLGLNPVELLVLPRVLALLISLPMLTFIGMVCGIFGGMVVCALTLDISPTMFLSIMQNSN 313 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 L + G+ KAP A I I+ EGF V + S+G TT VV SI +VI++D++ A Sbjct: 314 GLQHFLVGISKAPIFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAA 373 Query: 366 IFYFAIG 372 +F+ +G Sbjct: 374 LFFMEMG 380 >gi|78777725|ref|YP_394040.1| hypothetical protein Suden_1528 [Sulfurimonas denitrificans DSM 1251] gi|78498265|gb|ABB44805.1| conserved hypothetical protein [Sulfurimonas denitrificans DSM 1251] Length = 373 Score = 278 bits (712), Expect = 9e-73, Method: Composition-based stats. Identities = 106/370 (28%), Positives = 188/370 (50%), Gaps = 8/370 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + +F G + + ++ + ++ ++DL ++ +D+ G+ + + Sbjct: 12 DNKLSLKFKGELTLYNLMKYKKEIDKIAFS--KENAVVIDLLELSFLDSAGSIFLNNLQK 69 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + K ++ H + ++ +KI + +N IG+K K Sbjct: 70 ELELKELKVDITCHNRDVLDMLELIRVQKITL----KKIAKKKKRNRVEKIGEKSYKAYL 125 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 S +G + S+ + S + + +M + + ++ L SF+ G V+A Sbjct: 126 GILSFMAFMGELFSHKLRYLISFKNIRH--KEIAFEMNECAIKALGIISLTSFLIGVVVA 183 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q A+QL +GA IF +D++ + LRE+ L+TA++IAGRSGSA A+IG+MKI +E+DA Sbjct: 184 YQSAYQLKLYGANIFIVDMLGLSILRELSPLITAIVIAGRSGSAFTAQIGAMKITQELDA 243 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 ++TMG D R L+ P+I AL+I++PLL +++ AIIG IV +I +F RF+ Sbjct: 244 MQTMGFDPYRFLVVPKIIALMITMPLLIFVSDIMAIIGGMIVANLDLNITVDMFLDRFNE 303 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + + G+ K PF A I +A+ +G V + S+G T VV+SI VII D++ Sbjct: 304 VINIKHFIVGISKGPFFAFLIATIAIYQGLLVKDDTQSIGLNTTKSVVESIFAVIICDAI 363 Query: 364 FAIFYFAIGI 373 F+I + +GI Sbjct: 364 FSIAFTNLGI 373 >gi|146280488|ref|YP_001170641.1| ABC transporter permease [Pseudomonas stutzeri A1501] gi|145568693|gb|ABP77799.1| probable permease of ABC transporter [Pseudomonas stutzeri A1501] Length = 362 Score = 278 bits (712), Expect = 1e-72, Method: Composition-based stats. Identities = 115/366 (31%), Positives = 191/366 (52%), Gaps = 11/366 (3%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 R G+W + + +V + + + ++LS + +DT GA L+ + G Sbjct: 4 RIVGDWTLAHYAALRREVQRLRARI--DERSQIELSGLGALDTAGAGLLAELL----GPE 57 Query: 70 KLQGVSTHIEQLFS---LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 ++ + QL + + T + S F + HIG+ + Sbjct: 58 RIAAIEAWAPQLPAERLALLRTVATALDQPDAAESPRGYEFGYVLAHIGRTVAAVWKQQR 117 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + +GL + +++ L SL + G+ VP+V L++F+ GAV+A G Sbjct: 118 ALLGFIGLTLQTLLLTLPRPRRWR--LTSLAVHIEQTGLDAVPIVALLTFLVGAVVAFLG 175 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A L+ FGA I++++L+ LRE GVLL A+++AGRS SA A+IGSMK NEEIDAIRT Sbjct: 176 ATVLADFGATIYTVNLVGFSFLREFGVLLAAILLAGRSASAFAAQIGSMKSNEEIDAIRT 235 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +GL + +L+ PR+ A++I+LP+LT + S I G +V DI +FF+ Sbjct: 236 LGLSPIELLVLPRVLAMLITLPILTFVGMLSGIAGGLVVCVLALDISPTMFFNIMARDIA 295 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 +++ GL KAP A I ++ EGF V + S+G+ T+ VVQ+I +VI++D++ A+ Sbjct: 296 VSHFLVGLGKAPVFAFVIAVIGCLEGFKVTGSAQSVGEHTTSSVVQAIFMVILLDAIAAL 355 Query: 367 FYFAIG 372 F+ +G Sbjct: 356 FFMEMG 361 >gi|323524591|ref|YP_004226744.1| hypothetical protein BC1001_0219 [Burkholderia sp. CCGE1001] gi|323381593|gb|ADX53684.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1001] Length = 389 Score = 278 bits (711), Expect = 1e-72, Method: Composition-based stats. Identities = 95/370 (25%), Positives = 169/370 (45%), Gaps = 16/370 (4%) Query: 8 VFRFAGNWKSPEISEIADD---VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-FME 63 + R +G W + ++ + + DLS I +D +G + + + Sbjct: 31 IVRLSGQWTALALARDRATGHVIPQLRSLEGAEGIGQWDLSRIDRMDHVGGQALWRVWGH 90 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + +L I + +L+ + +G I F+ Sbjct: 91 RMPPDTELTDTQRDIFERIALLDTVRETAEPVVRFDP----------FTRLGLAIFSFLE 140 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 + G V+ + + +Y G +P+ L++F+ G V++ Sbjct: 141 HLYGGVAMFGRVVLDLLAIARKPAI--TPWTEISANVYNAGTKALPITALVAFLIGIVLS 198 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA Sbjct: 199 YLSAQQLRLFGANQYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDA 258 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R MG+ LI PR+ AL +++PLL + N A+ G ++ I + F Sbjct: 259 MRVMGIPHGLRLILPRVVALGVAMPLLVMWTNIIALTGGALAAKIVLGIDMSYFARALPG 318 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +AN++ GL K I IV GF + +S SLG+ T+ VV SI+IVI+ D++ Sbjct: 319 VVPVANLWIGLGKGVAFGMLIAIVGCHFGFRIKANSQSLGEGTTSSVVTSITIVILADAV 378 Query: 364 FAIFYFAIGI 373 FAI + +G+ Sbjct: 379 FAILFQNVGL 388 >gi|305432464|ref|ZP_07401626.1| ABC superfamily ATP binding cassette transporter, ABC protein [Campylobacter coli JV20] gi|304444503|gb|EFM37154.1| ABC superfamily ATP binding cassette transporter, ABC protein [Campylobacter coli JV20] Length = 371 Score = 278 bits (711), Expect = 1e-72, Method: Composition-based stats. Identities = 112/373 (30%), Positives = 184/373 (49%), Gaps = 16/373 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 EN + +F G W +S+I + + I + I D S + EID G + Sbjct: 10 EENKVFIF---GIWDKTSVSKIK---IKDLLSQISQTNCIFDFSQLNEIDMAGVRFFLAL 63 Query: 62 ---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++K I QG++T + LF L +++ + Q+ + + F + +G Sbjct: 64 EHDLKKNDILILKQGLNTRFKSLFELCEKNYQRINEKQEKKFN-----FTDFFISLGILS 118 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + + G ++ + F+ +S + + +P+VIL + + Sbjct: 119 FDLLKILQKFINFTGAFFTSLFLCIKNPKNFR--FISFLYHIENSAFKALPIVILTALLV 176 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G V+A Q A+QL+QFGA IF +DL+ I RE+ L+ A++IAGRS S+ A+IG MKI Sbjct: 177 GVVLAYQAAYQLAQFGANIFIVDLVGISATRELAPLIAAIVIAGRSASSYTAQIGVMKIT 236 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 +EI+A+ TMG +I PR+ AL+I++PL+ L++ +I+G +V DI F F Sbjct: 237 DEINAMNTMGFRSFEFIIIPRVMALVIAMPLIVALSDAISILGGMVVAKINLDISFGEFL 296 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 RF + +I GL KAP IG++A GF V + S+G T VV +I VI Sbjct: 297 RRFREAVEMKHIIIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVI 356 Query: 359 IIDSLFAIFYFAI 371 D+LF++ + Sbjct: 357 AFDALFSVVLTIM 369 >gi|126666401|ref|ZP_01737380.1| ABC transporter, permease protein, putative [Marinobacter sp. ELB17] gi|126629202|gb|EAZ99820.1| ABC transporter, permease protein, putative [Marinobacter sp. ELB17] Length = 387 Score = 278 bits (711), Expect = 1e-72, Method: Composition-based stats. Identities = 110/360 (30%), Positives = 192/360 (53%), Gaps = 4/360 (1%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72 G+W P + V A S + ++L + IDT GA L+ + ++ + L Sbjct: 31 GDWTLPYYHALYSSVTAAGQDSDRYQ--TLNLQTLGRIDTAGAALLAELVGPHNLEQWLA 88 Query: 73 GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHIL 132 + + + + + +Q+P + + L +G + + + + Sbjct: 89 DNPQAVSRETAALLSAVATAMADQQPLPAPPGFTLSGLVRDVGAWVNELYQLVVTLIGFI 148 Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G +I+ +++ + + + + G++ VP+V L++F+ GAV+A GA L+ Sbjct: 149 GQIIAALAWTTLHPRRWR--MTAFVAAVQDTGLNAVPIVALLTFLVGAVVAFLGATVLAD 206 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 FGA I++++L++ LRE GVLL A+++AGR+ S+ A+IG+MK+NEE+DA+RT+GL + Sbjct: 207 FGATIYTVNLVAFSFLREFGVLLAAILLAGRTASSFTAQIGAMKVNEELDALRTLGLSPI 266 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 +L+ PR+ A+++SLPLLT + S ++G ++V DI F S L ++ Sbjct: 267 ELLVLPRVLAMMVSLPLLTFVGMISGMVGGALVCSMTLDITPTQFISIVSQDVALKHLLV 326 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 GL KAP A I VA EGF V + S+G T+ VVQSI +VI+ DS+ A+F+ +G Sbjct: 327 GLSKAPIFAFLIAAVACLEGFKVSGSAQSVGVHTTSSVVQSIFMVILFDSIAALFFMEMG 386 >gi|301062341|ref|ZP_07203004.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300443545|gb|EFK07647.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 390 Score = 278 bits (711), Expect = 1e-72, Method: Composition-based stats. Identities = 91/376 (24%), Positives = 182/376 (48%), Gaps = 12/376 (3%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +SE +F G+W ++ ++ D ++ D+ + Sbjct: 24 LSEQKTLQIKFQGDWILENKRPSISALIKQMDSEAAVRQITFDTLGLSRWDSALLICLTK 83 Query: 61 FMEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 +EK K + +G+ +L L S KK ++K N + + +G + Sbjct: 84 IIEKASQKDIPLDGKGLPEGAFKLLDLASTVPEKKGVHKK-------NGRPSFLFQVGSE 136 Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 V F N +G + +F +F+ L+R + G+ +P+V LIS + Sbjct: 137 SVAFFNSFLEALGFVGEAFNAFSKFLTGKARFRR--SDLMRIIQDCGIEALPIVSLISLL 194 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G ++A GA QL+ FGA+I+ +L+ I +R +G ++ +++AGR+G+A A++G+M++ Sbjct: 195 VGLILAFVGAVQLTMFGAQIYVANLVGIAMVRVMGAVMAGIIMAGRTGAAFAAQLGTMQV 254 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 NEEIDA +TMG+ + L+ PR+ AL + +PLL + A+ I+G IV D+ + Sbjct: 255 NEEIDAFKTMGISPMEFLVLPRMLALTLMMPLLCLYADLMGILGGFIVGVGMLDLNMMEY 314 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 +++ + TL++++ G++++ + + G G ++++G T+ VV I + Sbjct: 315 YNQTKAAVTLSDLWIGIVQSAVFGMLVALAGCLRGMQCGRSASAVGDATTSAVVTGIVSI 374 Query: 358 IIIDSLFAIFYFAIGI 373 I+ ++ + +GI Sbjct: 375 IVATAVITVITNMMGI 390 >gi|57168794|ref|ZP_00367925.1| conserved hypothetical integral membrane protein [Campylobacter coli RM2228] gi|57019841|gb|EAL56524.1| conserved hypothetical integral membrane protein [Campylobacter coli RM2228] Length = 371 Score = 278 bits (711), Expect = 1e-72, Method: Composition-based stats. Identities = 112/373 (30%), Positives = 184/373 (49%), Gaps = 16/373 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 EN + +F G W +S+I + + I + I D S + EID G + Sbjct: 10 EENKVFIF---GIWDKTSVSKIK---IKDLLSQISQTNCIFDFSQLNEIDMAGVRFFLAL 63 Query: 62 ---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++K I QG++T + LF L +++ + Q+ + + F + +G Sbjct: 64 EHDLKKNDILILKQGLNTRFKSLFELCEKNYQRINEKQEKKFN-----FTDFFISLGILS 118 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + + G ++ + F+ +S + + +P+VIL + + Sbjct: 119 FDLLKILQKFINFTGTFFTSLFLCIKNPKNFR--FISFLYHIENSAFKALPIVILTALLV 176 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G V+A Q A+QL+QFGA IF +DL+ I RE+ L+ A++IAGRS S+ A+IG MKI Sbjct: 177 GVVLAYQAAYQLAQFGANIFIVDLVGISATRELAPLIAAIVIAGRSASSYTAQIGVMKIT 236 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 +EI+A+ TMG +I PR+ AL+I++PL+ L++ +I+G +V DI F F Sbjct: 237 DEINAMNTMGFRSFEFIIIPRVMALVIAMPLIVALSDAISILGGMVVAKINLDISFGEFL 296 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 RF + +I GL KAP IG++A GF V + S+G T VV +I VI Sbjct: 297 RRFREAVEMKHIIIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVI 356 Query: 359 IIDSLFAIFYFAI 371 D+LF++ + Sbjct: 357 AFDALFSVVLTIM 369 >gi|167647526|ref|YP_001685189.1| hypothetical protein Caul_3564 [Caulobacter sp. K31] gi|167349956|gb|ABZ72691.1| protein of unknown function DUF140 [Caulobacter sp. K31] Length = 371 Score = 277 bits (710), Expect = 2e-72, Method: Composition-based stats. Identities = 113/372 (30%), Positives = 197/372 (52%), Gaps = 11/372 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 G +G+W + + + + ++ A++ SD+ +DL ++ DT GA I+ Sbjct: 11 DHEGRKTVMLSGDWTARGMVDAGERLITALD---GSDAVDLDLRDLSRCDTAGAYAIIRA 67 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + ++ S + +L L+ + + + PQ+ F+ L IG+ + Sbjct: 68 ADGRVSAGHIKANSRTL-RLLQLVGDAIQVEPEAAPPQK-----GFQALLERIGRGVYGL 121 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 +D LG ++ G A + + ++ G+ +P+V + +F GAV Sbjct: 122 GDDLYGTLGFLGHLLVAIGRCIAKPSRIR--WAPVVALAERSGLDAIPIVAVTTFFIGAV 179 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A GA L+QFGA++F+++L+ I LRE +L+TA+++AGRS S+ AEIGSMK+N+EI Sbjct: 180 VALLGANLLTQFGAQVFAVELIGISVLREFNILITAILLAGRSASSFAAEIGSMKMNQEI 239 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA++ MG+D L+ PR AL+I++PLLT +A + + G +V W D+ F R Sbjct: 240 DAMQVMGVDPYEALVLPRFAALLITIPLLTFIATLAGLAGGMLVTWAVLDLSPTFFLQRM 299 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + + + + GL KAP MA I + ++G VG SLG++VT VV +I +I ID Sbjct: 300 QDSVGVQHYWIGLSKAPVMAMVIAAIGCRQGMEVGNDVESLGRRVTAAVVHAIFAIIAID 359 Query: 362 SLFAIFYFAIGI 373 ++FA+ Y + + Sbjct: 360 AVFALIYMELDL 371 >gi|134096148|ref|YP_001101223.1| putative transmembrane protein [Herminiimonas arsenicoxydans] gi|133740051|emb|CAL63102.1| Conserved hypothetical protein, putative ABC transporter [Herminiimonas arsenicoxydans] Length = 374 Score = 277 bits (710), Expect = 2e-72, Method: Composition-based stats. Identities = 96/373 (25%), Positives = 182/373 (48%), Gaps = 13/373 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIA--DDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 + N AG+W+ ++ + + + ++++ DLS IT +D IGA+L+ Sbjct: 12 TPNDNATATAAGSWQVRALAAPETMAAITAVLQTAGKAETVHWDLSQITALDYIGAQLLW 71 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 GK + ++ + + ++ +KP + ++Y+ + + Sbjct: 72 ----NAWGKKRPAQLTLAPQHADFFLRLEQTGPLEWKKPPQKYWYS-----LTSLLQLKH 122 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 ++ ++G + + G F +G + +++ G + + L+ F+ G Sbjct: 123 NILDHLLGFISLIGQLTMDIGRFAREPQ--RGPWKEISANIFHAGYQALGITALVGFLIG 180 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V++ A QL QFG ++F ++++ + +RE+G LL A+++AGRSGS+I A++G M++ E Sbjct: 181 VVLSYLSAQQLHQFGGDVFLVNILGMSVIRELGPLLAAILVAGRSGSSITAQLGVMRVTE 240 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DA+ MGL L+ P++ AL I++PLL + + A+IG + + F Sbjct: 241 ELDAMLVMGLPHGYRLVMPKVIALAIAMPLLVVWTDAMALIGGMAAANLELGLSYKYFIR 300 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 LAN + GL K I +VA G + ++ SLG T VV +I+IVI+ Sbjct: 301 ELPDAVPLANYWIGLGKGVVFGALIALVACHFGLRIKPNTESLGAGTTISVVSAITIVIL 360 Query: 360 IDSLFAIFYFAIG 372 D+LFAI + +G Sbjct: 361 ADALFAIIFSKVG 373 >gi|28974221|gb|AAO64222.1| putative ABC transport system permease protein Cf0016 [Campylobacter fetus] Length = 367 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 105/345 (30%), Positives = 175/345 (50%), Gaps = 13/345 (3%) Query: 29 MAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFT 88 ++ + +DL + ID A K++ KL + +++F+L+S Sbjct: 36 KSLKELRSLKVDTLDLKNLIRIDYSAATFF----AKHYNCPKLINSNDKFDKIFALVSDK 91 Query: 89 HRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYK 148 + ++ K ++S NL IGK I+ N+ S LG + N + + + Sbjct: 92 YILNLQIIKFKKS-------NLIEQIGKNIINLKNELVSFCIFLGEFLFNLTKSLLNPFT 144 Query: 149 FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL 208 + L Y G+S V +V L SF+ G V+A QGA L FGA I+ +D+M I+ L Sbjct: 145 VR--FKELSNHFYSAGISAVFIVCLTSFLIGIVLAYQGATMLENFGASIYVVDIMGIMTL 202 Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268 RE+G L+ A+++AGRS S+ A+IG MKI +E++A++TMG + R ++ P + Sbjct: 203 REVGPLIAAIVVAGRSASSYTAQIGVMKITDELEAMKTMGFEPFRFIVMPACFGSYFGYA 262 Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328 +I + G +V Y D+ F+ + RF S+ L + + GL KAPF I ++ Sbjct: 263 FYSIFSKRGKYFGQMMVCNWYLDLSFSDYLERFRSSIALRHFWVGLFKAPFFGAVIALIG 322 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 K GF V +NS+G+ T VV +I +I +D++F+I Y + I Sbjct: 323 CKRGFEVSGSTNSVGELTTRSVVNAIFWIIALDAIFSIIYTELKI 367 >gi|238754554|ref|ZP_04615908.1| ABC transporter, permease protein [Yersinia ruckeri ATCC 29473] gi|238707185|gb|EEP99548.1| ABC transporter, permease protein [Yersinia ruckeri ATCC 29473] Length = 343 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 113/336 (33%), Positives = 175/336 (52%), Gaps = 2/336 (0%) Query: 37 SDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96 S DLS + +DT GA L+ + + ++ L+ + Sbjct: 9 PASITFDLSQLGRLDTAGATLLATLLGGERISHLRELAPLLPDERRILLETVSQVLPNLA 68 Query: 97 KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156 + L IG+ + D S GL + +++ + SL Sbjct: 69 SQPTVKPPPFWIGLLVPIGQSVDNLWQDFKSLLGFTGLTLEALFGTVFRPSRWR--MTSL 126 Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I + +G++ VP+++L++F+ GAVIA GA L+ FGA IF++DL+ LRE VLLT Sbjct: 127 IANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTTFGAGIFTVDLVVFSFLREFAVLLT 186 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A+++AGR+ SA AEIG MK NEEIDAI+T+GL+ V +L+ PR+ AL+ISLP+LT + Sbjct: 187 AILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPVELLVLPRVLALLISLPMLTFIGMV 246 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 I G +V +I +F S ++ L + G+ KAP A I I+ EGF V Sbjct: 247 CGIFGGMVVCALALNISPTMFLSIMQNSNGLQHFLVGISKAPIFAFLIAIIGCLEGFKVS 306 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 + S+G TT VV SI +VI++D++ A+F+ +G Sbjct: 307 GSAESVGIHTTTSVVHSIFVVILLDAVAALFFMEMG 342 >gi|121603099|ref|YP_980428.1| hypothetical protein Pnap_0182 [Polaromonas naphthalenivorans CJ2] gi|120592068|gb|ABM35507.1| protein of unknown function DUF140 [Polaromonas naphthalenivorans CJ2] Length = 382 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 92/372 (24%), Positives = 182/372 (48%), Gaps = 20/372 (5%) Query: 11 FAGNWKSP---------EISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 G W + ++ + S + LS + ++D +GA+++ Sbjct: 22 LQGAWTAANLTQKPLWDALAAQLKALRAQTASSASPAALRWSLSPLEKLDYLGAQVLWSA 81 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + G+ EQ +++ + ++ P R + +G++++ Sbjct: 82 WNHHW----PAGLQIEPEQ-RAMLETVEKFTVRPLPPPRPSWLEPVL----MLGERLLSL 132 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 ++ + +LG ++ + G + G L +Y G + +P+ L+ F+ G V Sbjct: 133 LSHAKGMLRLLGQLLLDMGRLVRHPQQ--GPWRDLSGHLYNFGATALPITALVGFLIGVV 190 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A + QL QFGA+ F ++++ I +RE+G +L A++IAGRSGSAI A+IG M++ EE+ Sbjct: 191 LAYLISQQLRQFGADAFIVNILGISLIRELGPVLAAILIAGRSGSAITAQIGVMRVTEEL 250 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+R MG+ L+ PR AL + +PL+++ +A++G + + + FF+ Sbjct: 251 DAMRVMGIARGFRLVMPRAMALALVMPLISVWTTIAALLGGMLAADISMGVTPSFFFNAL 310 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + ++N+ K+ I ++ G V ++ SLG+ T VV SI++VI++D Sbjct: 311 PAAVKVSNLVLATAKSVVFGLLIALIGCHYGLRVKPNTESLGQGTTASVVTSITVVILVD 370 Query: 362 SLFAIFYFAIGI 373 +LFA+ + ++GI Sbjct: 371 ALFAVLFKSVGI 382 >gi|237747194|ref|ZP_04577674.1| ABC transport system permease [Oxalobacter formigenes HOxBLS] gi|229378545|gb|EEO28636.1| ABC transport system permease [Oxalobacter formigenes HOxBLS] Length = 374 Score = 276 bits (707), Expect = 3e-72, Method: Composition-based stats. Identities = 94/370 (25%), Positives = 179/370 (48%), Gaps = 13/370 (3%) Query: 5 GITVFRFAGNWKSPEISE--IADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 G T GNW+ ++ + + + + + S DL+ I E+D IGA+L+ Sbjct: 15 GNTCVIARGNWRVESLAASGVINRIRSTVRSFSKKGSVSWDLTQILELDYIGAQLLWDNW 74 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 K + L V++ +LFS + ++ +KP + + Sbjct: 75 NKTRPRELL--VTSEQNKLFSRLESAGNLQLPAEKPAHWQLFGRIRKFPQ-------AAA 125 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ++G ++ + F + + +G + +Y+ G + + ++ F+ G V+ Sbjct: 126 EHFSGIVGLVGQLMIDLARFAKAPH--RGPWTEISANIYHAGAQALGITAIVGFLIGVVL 183 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + A QL FG ++F ++L+ + +RE+G LL A+++AGRSGS++ A++G M++ EE+ Sbjct: 184 SYLSAQQLHMFGGDVFLVNLLGMSVIRELGPLLAAILVAGRSGSSMTAQLGVMRVTEELS 243 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++ MG+ LI P++ AL I +PLL I + A++G + + F S Sbjct: 244 AMQVMGMSHGFRLIMPKVIALSIVMPLLIIWTDIVALLGGMLAASFEIGLSIPYFLSALP 303 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + +AN + G+ K I ++A G + ++ SLG+ T VV SI+IVI+ D+ Sbjct: 304 NAVPMANFWIGIGKGIVFGILIALIACYYGMKIKPNTESLGQGTTNSVVTSITIVILADA 363 Query: 363 LFAIFYFAIG 372 +FA+ +G Sbjct: 364 IFAVVLQGVG 373 >gi|107023833|ref|YP_622160.1| hypothetical protein Bcen_2286 [Burkholderia cenocepacia AU 1054] gi|105894022|gb|ABF77187.1| protein of unknown function DUF140 [Burkholderia cenocepacia AU 1054] Length = 425 Score = 276 bits (707), Expect = 3e-72, Method: Composition-based stats. Identities = 100/366 (27%), Positives = 169/366 (46%), Gaps = 33/366 (9%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R G W + ++ V I + DLS I +D +G + + + G Sbjct: 92 TVRLTGQWTALSLARNRGAVARRIASIAAGRVSEWDLSGIERLDHVGGQALW----RVWG 147 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + GV+ Q ++ R + + P+R ++ L G I F Sbjct: 148 RKLPAGVALSATQ-RTIFERIERLDSEREAPERIVRFDPVTRL----GLAIFAFGEHLQG 202 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + G VI + +Y G +P+ L++F+ G V++ A Sbjct: 203 GITMFGRVILDALSVLRRPKTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 260 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M Sbjct: 261 QQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 320 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ LI PR+ AL +++PLL + N A+ G + Sbjct: 321 GIPHGLRLILPRVLALGVAMPLLVMWTNIIALPG----------------------VVPI 358 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN++ G+ K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI Sbjct: 359 ANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIL 418 Query: 368 YFAIGI 373 + +G+ Sbjct: 419 FQNVGL 424 >gi|15598407|ref|NP_251901.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|9949331|gb|AAG06599.1|AE004744_14 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1] Length = 381 Score = 276 bits (707), Expect = 3e-72, Method: Composition-based stats. Identities = 112/364 (30%), Positives = 184/364 (50%), Gaps = 4/364 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G+W + + +V +S + + DLS + +DT GA L+ + Sbjct: 21 VRAIGDWTLAHYTALEREVTRL--RSEVAANVSFDLSQLGALDTAGAALLAELLGAERLA 78 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + + +L+ +P++ + L IG + F + Sbjct: 79 DLAELEPGLPRERQALLKTVGHALHDFCEPEKPKPPTTAIELLARIGCAMETFWLHLKAL 138 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +GL + ++ + L+ + G+ VP++ L++F+ GAVIA GA Sbjct: 139 LGFIGLTLETLFRSLVRPASWR--VTPLVANIEKSGLDAVPIIALLTFLVGAVIAFLGAT 196 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L+ FGA I++++L+ LRE VLLTA+++AGR+ SA A+IGSMK NEEIDAIR +G Sbjct: 197 VLANFGATIYTVNLVVFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRALG 256 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 L+ + +L+ PR+ AL++SLP+LT + I+G V DIP A+F S + Sbjct: 257 LNPIELLVLPRVLALLVSLPMLTFVGMLCGIVGGMTVCAWTLDIPPAMFLSIMEDGIGVQ 316 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + G+ KAP A I ++ EGF V + S+G+ TT VV SI +VI++D+L A+ + Sbjct: 317 HFLVGISKAPLFAFLIAVIGCLEGFKVSGSAQSVGEHTTTSVVHSIFVVILLDALAALLF 376 Query: 369 FAIG 372 +G Sbjct: 377 MEMG 380 >gi|160872209|ref|ZP_02062341.1| ABC transporter, permease [Rickettsiella grylli] gi|159121008|gb|EDP46346.1| ABC transporter, permease [Rickettsiella grylli] Length = 375 Score = 276 bits (707), Expect = 3e-72, Method: Composition-based stats. Identities = 112/376 (29%), Positives = 195/376 (51%), Gaps = 13/376 (3%) Query: 1 MSENGITVFRFAGNWKSPEISE-IADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 +S+ G G W I + D +N+ I+S I++ + IT++D+ GA + Sbjct: 10 LSKQGNHQIDCQGAWTLSGIRKKNLDQSFQKLNRHIES-PLILNAAFITQMDSSGAWQLY 68 Query: 60 YFMEKYH--GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 + ++ K+ L G+++ + LF +I + + + +GKK Sbjct: 69 QWKKQLAKKRKVHLIGLNSKHQALFGMIETAAEQIKPLPREK-------TFRGLGLLGKK 121 Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 ++ N+ S +G + + + + +++ + G+ + ++ L+SF+ Sbjct: 122 SIEQWNELKSYLAFIGKNFISACHAFLHPRQLR--VRAILGIIENTGLDALGIIALLSFM 179 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ Q FQL FGA F IDL+ + LRE LLTA+M+AGRSGSA A++G MKI Sbjct: 180 IGIVLTYQMGFQLKNFGATRFIIDLLGLAILREFSPLLTAIMVAGRSGSAFTAQLGMMKI 239 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EEIDA+ TMG+ ++LI PR+W L+++LPLLT+ A+ ++G + +I + F Sbjct: 240 KEEIDALNTMGVLPRQLLILPRLWGLLLALPLLTVWADIFGLLGGMAMTHNMMNISYLDF 299 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 RF +L+++ G+ KAP A I A +G V ++S+G++ T VVQ I + Sbjct: 300 LHRFPKVVSLSSLIIGVGKAPVFALIIASTACFQGLRVSGSADSVGRQTTRSVVQGIFFI 359 Query: 358 IIIDSLFAIFYFAIGI 373 I+ D+LF+I + + I Sbjct: 360 IVADALFSILFSTLNI 375 >gi|82702739|ref|YP_412305.1| hypothetical protein Nmul_A1612 [Nitrosospira multiformis ATCC 25196] gi|82410804|gb|ABB74913.1| Protein of unknown function DUF140 [Nitrosospira multiformis ATCC 25196] Length = 384 Score = 276 bits (706), Expect = 4e-72, Method: Composition-based stats. Identities = 111/366 (30%), Positives = 191/366 (52%), Gaps = 5/366 (1%) Query: 9 FRFAGNWKSPEISEIADD--VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 GNW + + + ++ ++ + + VDL + +DT GA + + Sbjct: 21 LNVRGNWTLENYAALGEQIALLRHRSRGLAAAGRNVDLGGLAALDTAGAARLYELLG-AE 79 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 +L + +L+ + K + +F + H G + F Sbjct: 80 LAGELAASDALSRERSALLLMVAKAMEAAGKVSQRRQRGAFIEIFGHAGVALEIFRQQIL 139 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + +G + +++ L S++ Q++ G++ VP++ L++F+ GAVIA G Sbjct: 140 ALLGFMGFTLDALARGLLHPKRWR--LTSIVAQIHETGLNAVPIIALLNFMVGAVIAFLG 197 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A L+ FGA I++++L++ LRE+GVLLTA+++AGR+ S A++GSMKINEEIDA R Sbjct: 198 ATVLANFGASIYTVNLVTFAFLRELGVLLTAILMAGRTASTFTAQLGSMKINEEIDATRV 257 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +GL+ V +L+ PR+ AL +SLP+LT + S I+G ++V DI A+F + F Sbjct: 258 LGLNPVNLLVLPRVLALFVSLPILTFVGMISGILGGALVCALQLDISLAMFLTIFQDQIE 317 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L + G+ KAP A IG++ EG V + S+G+ T VV SI +VI +D++ A+ Sbjct: 318 LRHFLVGMSKAPVFAFVIGVIGCLEGLKVSGSALSVGQHTTASVVHSIFVVIFLDAMAAL 377 Query: 367 FYFAIG 372 F+ +G Sbjct: 378 FFMEMG 383 >gi|83720699|ref|YP_440931.1| ABC transporter permease [Burkholderia thailandensis E264] gi|83654524|gb|ABC38587.1| ABC transporter, permease protein [Burkholderia thailandensis E264] Length = 404 Score = 276 bits (706), Expect = 5e-72, Method: Composition-based stats. Identities = 98/366 (26%), Positives = 175/366 (47%), Gaps = 11/366 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R +G W + ++ +V I + + DLS + +D +G + + + G Sbjct: 49 TVRLSGQWTALALARDRGNVARRIARLAKEPVGEWDLSGVDRLDHVGGQALW----RVWG 104 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + G++ Q ++ R + P+ + G+ + F Sbjct: 105 RRLPAGIALTDNQ-RTVFERIERLDAGREAPEPVVRIDPVTRF----GQGLFTFGEHLYG 159 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +LG +I + + +Y G +P+ L++F+ G V++ A Sbjct: 160 GIALLGGLIVDLLSVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIVLSYLSA 217 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M Sbjct: 218 QQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 277 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ + PR+ AL +++PLL + N A+ G ++ I F S + Sbjct: 278 GIPHGLRITLPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDLNFFVRSLPSVVPI 337 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN+F GL K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI Sbjct: 338 ANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAIL 397 Query: 368 YFAIGI 373 + +G+ Sbjct: 398 FQNVGL 403 >gi|315453380|ref|YP_004073650.1| ABC transport system permease protein (pseudogene) [Helicobacter felis ATCC 49179] gi|315132432|emb|CBY83060.1| putative ABC transport system permease protein (pseudogene) [Helicobacter felis ATCC 49179] Length = 369 Score = 275 bits (705), Expect = 5e-72, Method: Composition-based stats. Identities = 104/366 (28%), Positives = 172/366 (46%), Gaps = 8/366 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 GNW ++ + + + VD + +D + L+ + + Sbjct: 12 TLFLRGNWDFKTPAQTLLRLEKLLKNA--PPIRAVDFREVERLDFVFLMLLYDLLGRK-- 67 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 K + + + + ++ ++ R N +G+ IV F N + Sbjct: 68 KPAILNANAYNAHVLEVVQHWVKEDPSIL--SREHSKPPKINPLNKLGQSIVDFFNTMLN 125 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + G+V+ G L LI ++ G +PV IL FV G IA QGA Sbjct: 126 TFNFCGMVLYFLGRAIIKPKTL--CLTPLIHHIHESGFKVLPVSILTVFVVGFAIALQGA 183 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL Q G + SI++ + L LRE+G + +++AGRS S+ A+IG MKI EE+DA+ TM Sbjct: 184 IQLQQLGFPLMSIEMTAKLALREMGPFILTLVVAGRSASSFTAQIGVMKITEELDAMHTM 243 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GL L+ PR+ AL+I +PL+ +A+ A++G + I + F + +R H L Sbjct: 244 GLSPFAWLVLPRVLALVIVMPLMVFIADAFALLGTMVAIKYQLGVTFNHYIARLHENVGL 303 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ F GLIKAPF AI IV GF V + S+G T VV ++ +I +++LF++ Sbjct: 304 SHFFVGLIKAPFWGFAIAIVGCMRGFEVKGDTESIGTLTTISVVNALFWIIFLNALFSVI 363 Query: 368 YFAIGI 373 + + I Sbjct: 364 FSKLNI 369 >gi|328954405|ref|YP_004371739.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM 11109] gi|328454729|gb|AEB10558.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM 11109] Length = 418 Score = 275 bits (705), Expect = 5e-72, Method: Composition-based stats. Identities = 103/368 (27%), Positives = 181/368 (49%), Gaps = 12/368 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G +G + +++ I + + + Q S +DL + +D+ GA ++ E Sbjct: 57 DGGQKLLISGRLELFDLA-IFSREIQPLLQQPQLSSVGLDLGGLEYLDSAGALAVLQLAE 115 Query: 64 KYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 K + L +S I+++ LI I+ +G+ + Sbjct: 116 KLKSQGIICTLDNISPKIKKILDLID------IQALTHPPLITVGKRFGWISQVGEASLA 169 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 F D G ++ + C + + ++ M GV G+P+V LI + G Sbjct: 170 FWRDIIEVIAFFGELLLDLASVCLRPRRVR--WEYVMFYMKRAGVDGLPIVSLIGLLLGL 227 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 +IA + QL QFGA I+ L+ + +RE+G ++TA+++AGRSGSA AEIGSMK++EE Sbjct: 228 IIAFMSSLQLQQFGANIYVASLLGVAMVRELGPIMTAILVAGRSGSAFAAEIGSMKVSEE 287 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +DA+ MG + +R+L +P++ A ++ +PLLTI A+ IIG IV D+ + Sbjct: 288 VDALTVMGFNPMRMLTTPKVIASLVVVPLLTIYADLLGIIGGLIVGVTMLDLTVYSYIQE 347 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 TL + + IK+ A I + + GF V ++++G T+ VV +I ++I++ Sbjct: 348 TRRILTLFDFTSSFIKSVVFAFLIAAIGCQRGFQVRGGASAVGSATTSAVVAAIFLIIVV 407 Query: 361 DSLFAIFY 368 DS+FAI Sbjct: 408 DSIFAIVL 415 >gi|33599154|ref|NP_886714.1| putative integral membrane protein [Bordetella bronchiseptica RB50] gi|33575200|emb|CAE30663.1| putative integral membrane protein [Bordetella bronchiseptica RB50] Length = 378 Score = 275 bits (705), Expect = 5e-72, Method: Composition-based stats. Identities = 95/367 (25%), Positives = 177/367 (48%), Gaps = 12/367 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-YFMEKYH 66 V +G+W ++ + + DL + +DTIGA L+ + ++ Sbjct: 23 VCHVSGDWSMQALAAPGEVERRRAALARVDPDQRWDLRGVERLDTIGAHLLWGAWGQQLP 82 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 +++ S ++F + + + P + + IG + + Sbjct: 83 ERVRW---SDGQREVFQTLQRNRGEALPAPAPADRWGW------LRAIGDAVFDAGRNGR 133 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + + G ++ + G F +G + Q+Y G + + L+ F+ G V++ Sbjct: 134 ALIIMFGQLVLDLGAFLRRPS--RGPWREISAQVYRTGAQALGITALVGFLIGVVLSYLS 191 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A QL FGA+ F + L+ + +RE+G +L A+++AGRSGSAI A+IG M++ +E+DA+ Sbjct: 192 AQQLQMFGADRFIVRLLGVSIVRELGPVLAAILVAGRSGSAITAQIGVMRVTQELDAMLV 251 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG+ + LI PR+ AL I++PLL + + A++G + + F + + Sbjct: 252 MGISHGQRLILPRVIALAITMPLLVVWTDAMALLGGMLAAQMQLGVSAQWFLTSLPDAIS 311 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L N + G+ K I +VA G + ++ SLG+ TT VV SI+ VI++D+L+A+ Sbjct: 312 LTNYWIGMFKGVSFGVLIALVACHFGLCIQPNTESLGRGTTTSVVTSITGVILVDALYAV 371 Query: 367 FYFAIGI 373 + +IGI Sbjct: 372 IFSSIGI 378 >gi|329905881|ref|ZP_08274264.1| ABC-type transport system [Oxalobacteraceae bacterium IMCC9480] gi|327547452|gb|EGF32273.1| ABC-type transport system [Oxalobacteraceae bacterium IMCC9480] Length = 372 Score = 275 bits (705), Expect = 5e-72, Method: Composition-based stats. Identities = 95/368 (25%), Positives = 175/368 (47%), Gaps = 15/368 (4%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 +V +G W+ +++ + + + DL+ IT ID IGA+ ++ Sbjct: 17 SVIVASGAWQVHALADAGVIGQLDAALARLTKPTGWDLTQITAIDHIGAQ----WLWNVW 72 Query: 67 GKIKLQGV--STHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 GK + G+ S ++ F + + + R +G + Sbjct: 73 GKTRPPGLVLSDRQDEFFQRLEQAGPLTLPEVQKPRWKQ-------LIRLGARTQSLTGH 125 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +LG ++ + F + +G + +Y G + + L+ + G V++ Sbjct: 126 LIDVVGLLGQLMFDLRRFALNPR--RGPWKEISSNIYRTGYQALGITALVGMLIGVVLSY 183 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 A QL FG +I+ ++++ + +RE+G LL A+++AGRSGS+I A++G M++NEE+DA+ Sbjct: 184 LSAQQLHSFGGDIYLVNILGMSIIRELGPLLAAILVAGRSGSSITAQLGVMRVNEELDAM 243 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MGL LI P++ AL I++PLL I + A++G + + F + Sbjct: 244 LVMGLPHGFRLIMPKVLALAIAMPLLVIWTDAMALLGGMVAANLELGLSPRYFLHKLPDA 303 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 LAN + G+ K I +VA GF + ++ SLG T+ VV +I++VI+ D++F Sbjct: 304 VPLANYWIGIGKGVVFGGLIALVACHFGFRIKANTESLGAGTTSSVVTAITVVILADAVF 363 Query: 365 AIFYFAIG 372 AI + +G Sbjct: 364 AIVFSGVG 371 >gi|307825468|ref|ZP_07655686.1| protein of unknown function DUF140 [Methylobacter tundripaludum SV96] gi|307733354|gb|EFO04213.1| protein of unknown function DUF140 [Methylobacter tundripaludum SV96] Length = 379 Score = 275 bits (705), Expect = 5e-72, Method: Composition-based stats. Identities = 102/374 (27%), Positives = 183/374 (48%), Gaps = 16/374 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY- 60 +G + + G+W + A ++ I+ + + DLS+I +D+ + ++ Sbjct: 19 QSDGQSCVKLTGSWNLRSLVT-ATELNRKISSHAANKNIQWDLSSIEVLDSASSLILWKA 77 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIG-KKIV 119 + +K ++L+ ++LF + + QK S +L G + Sbjct: 78 WGKKLPVALQLK---PEHQRLFD--------RWQAQKIPEPEPVGSSSSLIIKYGYQLFA 126 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 F +LG + + G + +Y GV + + L+ F+ G Sbjct: 127 NFWGQLLQLVTLLGQLFLDIGYLLLHPGDIP--WSEISITIYESGVRALGITALVGFLIG 184 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V++ A QL FGAEI+ ID++ + +RE+G LL A+++AGRSGSA+ A+IG M++ E Sbjct: 185 IVLSYLSALQLKIFGAEIYIIDILGLSVIRELGPLLAAILVAGRSGSAMTAQIGIMRVTE 244 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DA+ MG+ L P++ AL I LPL+ + + A+IG + DI + FF Sbjct: 245 ELDALSAMGISHSLRLTLPKVMALTIVLPLIGVWTSALALIGGMVSAQNTLDISYQQFFL 304 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 + L N+F GL K+ I ++A GF + ++ SLG + T VV +I++VI+ Sbjct: 305 KLPDVVPLTNVFIGLGKSAVFGLMIALIACHFGFRIKPNTESLGNETTNSVVAAITVVIM 364 Query: 360 IDSLFAIFYFAIGI 373 +D++FAI + +G+ Sbjct: 365 VDAVFAILFMNVGM 378 >gi|33594879|ref|NP_882522.1| putative integral membrane protein [Bordetella parapertussis 12822] gi|33564955|emb|CAE39902.1| putative integral membrane protein [Bordetella parapertussis] Length = 378 Score = 275 bits (705), Expect = 5e-72, Method: Composition-based stats. Identities = 95/367 (25%), Positives = 177/367 (48%), Gaps = 12/367 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-YFMEKYH 66 V +G+W ++ + + DL + +DTIGA L+ + ++ Sbjct: 23 VCHVSGDWSMQALAAPGEVERRRAALARVDPDQRWDLRGVERLDTIGAHLLWGAWGQQLP 82 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 +++ S ++F + + + P + + IG + + Sbjct: 83 ERVRW---SDGQREVFQTLQRNRGEALPAPAPADRWGW------LRAIGDAVFDAGRNGR 133 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + + G ++ + G F +G + Q+Y G + + L+ F+ G V++ Sbjct: 134 ALIIMFGQLVLDLGAFLRRPS--RGPWREISAQVYRTGAQALGITALVGFLIGVVLSYLS 191 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A QL FGA+ F + L+ + +RE+G +L A+++AGRSGSAI A+IG M++ +E+DA+ Sbjct: 192 AQQLQMFGADRFIVRLLGVSIVRELGPVLAAILVAGRSGSAITAQIGVMRVTQELDAMLV 251 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG+ + LI PR+ AL I++PLL + + A++G + + F + + Sbjct: 252 MGISHGQRLILPRVIALAITMPLLVVWTDAMALLGGMLAAQMQLGVSAQWFLTSLPDAIS 311 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L N + G+ K I +VA G + ++ SLG+ TT VV SI+ VI++D+L+A+ Sbjct: 312 LTNYWIGMFKGVSFGILIALVACHFGLCIQPNTESLGRGTTTSVVTSITGVILVDALYAV 371 Query: 367 FYFAIGI 373 + +IGI Sbjct: 372 IFSSIGI 378 >gi|150396764|ref|YP_001327231.1| hypothetical protein Smed_1554 [Sinorhizobium medicae WSM419] gi|150028279|gb|ABR60396.1| protein of unknown function DUF140 [Sinorhizobium medicae WSM419] Length = 379 Score = 275 bits (705), Expect = 6e-72, Method: Composition-based stats. Identities = 150/370 (40%), Positives = 217/370 (58%), Gaps = 10/370 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + + F+G+W+ ++ + + + D S IT +DT GA +I F Sbjct: 18 AAGNGRRYVFSGDWRHETAEAMSAKLKRLGKPA--GGQSEFDFSGITAMDTAGAWIIRRF 75 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 M +++ G + E + +L + + + F+ L +G+ V Sbjct: 76 MNGTADEVRFAGSDRYAELILALPKQLRSPEGETARAP------LFQRLFAPVGELTVSI 129 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 D+ + +ILG + G +++ Q+ +GV P++ L+SF+ GA+ Sbjct: 130 WTDTVAAMYILGSAVR--GAQMKLGRHAGVSPAAIVHQIDRMGVMATPIITLMSFLIGAI 187 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IAQQGAFQL FGAEIF +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EE+ Sbjct: 188 IAQQGAFQLRSFGAEIFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREEV 247 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA++ MGL + +L+ PR+ AL I LPLLTI+ANF+A+ GA++V W Y I F +R Sbjct: 248 DALKVMGLSPIGVLVFPRLVALTIVLPLLTIIANFAALAGAAMVAWAYSGITIPTFLARL 307 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 +++ G+IKAPFMA IG+VA EG VG + SLG++VT+ VV+SI +VI+ID Sbjct: 308 QEAVDFSSVAAGMIKAPFMALIIGVVAAVEGLKVGGSAESLGRRVTSSVVKSIFVVILID 367 Query: 362 SLFAIFYFAI 371 LFAIFY AI Sbjct: 368 GLFAIFYAAI 377 >gi|241767246|ref|ZP_04764987.1| protein of unknown function DUF140 [Acidovorax delafieldii 2AN] gi|241362094|gb|EER58209.1| protein of unknown function DUF140 [Acidovorax delafieldii 2AN] Length = 373 Score = 275 bits (704), Expect = 7e-72, Method: Composition-based stats. Identities = 90/365 (24%), Positives = 180/365 (49%), Gaps = 14/365 (3%) Query: 11 FAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-YFMEKYHGK 68 G W + E+ + + + A + + + DL + +D +GA+L+ ++ + + G+ Sbjct: 21 LLGRWGAAELGQRSQWRALSAQLRDNTAPAGGWDLRGLDWLDHVGAQLLWDHWGQAWPGR 80 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 ++L + + + P + H+G ++ ++ + Sbjct: 81 LEL---TDPQRAMLERVG-------AFTAPPPPAEPWRLADQADHLGVLVLHGLDHARHV 130 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 ++G + + + + + + +Y +G + +P+ L+ F+ G V+A + Sbjct: 131 VQLIGQLALDLLRLVRAPH--RAPWRDMSGHVYRMGATALPITALVGFLIGVVLAYLMSL 188 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 QL Q+GAE F ++++ I +RE+G +L A+++AGRSGS+I A+IG M++ EE+DA+R MG Sbjct: 189 QLRQYGAESFIVNILGISLIRELGPMLAAILVAGRSGSSITAQIGVMRVTEELDAMRVMG 248 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + L+ PR AL +++PL+++ +A+ G + I A F + + Sbjct: 249 IPHGFRLVMPRTLALALAMPLISVWTTLAALAGGMLAADVSMGISPAYFVEALPAAVKIG 308 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 N+ K+ I ++ G V ++ SLG+ T VV SI++VII+D+LFA+ + Sbjct: 309 NLGLATAKSVVFGALIALIGCHWGLRVKPNTQSLGEGTTASVVTSITMVIIVDALFAVAF 368 Query: 369 FAIGI 373 IGI Sbjct: 369 KNIGI 373 >gi|319788025|ref|YP_004147500.1| hypothetical protein Psesu_2437 [Pseudoxanthomonas suwonensis 11-1] gi|317466537|gb|ADV28269.1| protein of unknown function DUF140 [Pseudoxanthomonas suwonensis 11-1] Length = 371 Score = 275 bits (704), Expect = 8e-72, Method: Composition-based stats. Identities = 122/364 (33%), Positives = 188/364 (51%), Gaps = 13/364 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G+W E+A + + I D A VD S + ID+ G + F + Sbjct: 20 VRLQGDWILDHALEMAARL-----REIPGDVASVDASGVGRIDSAGMMQLARFARRRELA 74 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 S L LI + + +P+R Y F +G+ + Sbjct: 75 DDALHFSESHLPLVQLIE-----DVPDDRPRRKRDYG-FAAALERLGRATHTVGRNIVEL 128 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 G + + L + + M VG+ +P+V L+S++ GAVIA G+ Sbjct: 129 LGFTGENLVKLLRLLRQPRR--FRLTATVSHMEQVGLDALPLVALLSYLVGAVIAFLGST 186 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L+ FGAEIF ++L+SI LRE VLLTA+++AGR+ SA A+IGSMK EEIDAIRT+G Sbjct: 187 ILADFGAEIFVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGSMKAREEIDAIRTLG 246 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD + +L+ PR+ AL++ LPLLT +A + + G V +IP ++ +R T + Sbjct: 247 LDPIELLVIPRLVALLVMLPLLTFVAMMAGLAGGVTVGAFDLEIPPQMYLARMEETMQVR 306 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + G+ KAP A IG++ EG V + S+G++ T+ VVQ+IS+VIIID+L A+++ Sbjct: 307 HFLVGMSKAPVFAMVIGLIGCLEGMRVQGSAQSVGERTTSSVVQTISLVIIIDALAALWF 366 Query: 369 FAIG 372 +G Sbjct: 367 MNMG 370 >gi|322378616|ref|ZP_08053052.1| hypothetical protein HSUHS1_0274 [Helicobacter suis HS1] gi|322380555|ref|ZP_08054721.1| hypothetical integral membrane protein [Helicobacter suis HS5] gi|321147017|gb|EFX41751.1| hypothetical integral membrane protein [Helicobacter suis HS5] gi|321148923|gb|EFX43387.1| hypothetical protein HSUHS1_0274 [Helicobacter suis HS1] Length = 368 Score = 275 bits (703), Expect = 9e-72, Method: Composition-based stats. Identities = 108/366 (29%), Positives = 181/366 (49%), Gaps = 8/366 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 G+W ++ + + + +D + +D + L+ + + Sbjct: 11 TLVLQGSWDFKTSAKALTHLKTILKDA--PPIEAIDFKGVASLDFVFLMLLYDLLGR--R 66 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 K + S + ++ ++ R K + F N +G+ +V F N + Sbjct: 67 KPEFLNPSAYNAKVLEVVETWIRANPSILKQEHVSRV--FINPLEKLGRGVVSFYNTLLN 124 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + G++I G LI ++ G +PV IL FV G IA +GA Sbjct: 125 TFNFCGMIIYYVGLAFIRPKS--VCWTPLIHHIHESGFKVLPVSILTVFVVGFAIALEGA 182 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL + G + SI++ + L LRE+G + A+++AGRS S+ A+IG+MKI EE+DA+ TM Sbjct: 183 VQLQELGFPMMSIEMTAKLALREMGPFILALVVAGRSASSFTAQIGAMKITEELDAMETM 242 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GL+ L+ PR+ AL+I++PLL LA+ A++GA I I I FA + +R H L Sbjct: 243 GLNPFAFLVLPRVVALVIAMPLLVFLADAFALLGAMIAIKYQLGIGFAHYVARLHENVGL 302 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ F GLIKAPF AI +V GF V ++ S+G+ T VV S+ +I +D+LF++ Sbjct: 303 SHFFIGLIKAPFWGFAIALVGCMRGFEVKGNTESIGQLTTISVVNSLFWIIFLDALFSVI 362 Query: 368 YFAIGI 373 + + + Sbjct: 363 FSRLDV 368 >gi|33591357|ref|NP_879001.1| putative integral membrane protein [Bordetella pertussis Tohama I] gi|33570999|emb|CAE40477.1| putative integral membrane protein [Bordetella pertussis Tohama I] Length = 376 Score = 275 bits (703), Expect = 1e-71, Method: Composition-based stats. Identities = 95/367 (25%), Positives = 177/367 (48%), Gaps = 12/367 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-YFMEKYH 66 V +G+W ++ + + DL + +DTIGA L+ + ++ Sbjct: 21 VCHVSGDWSMQALAAPGEVERRRAALARVDPDQRWDLRGVERLDTIGAHLLWGAWGQQLP 80 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 +++ S ++F + + + P + + IG + + Sbjct: 81 ERVRW---SDGQREVFQTLQRNRGEALPAPAPADRWGW------LRAIGDAVFDAGRNGR 131 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + + G ++ + G F +G + Q+Y G + + L+ F+ G V++ Sbjct: 132 ALVIMFGQLVLDLGAFLRRPS--RGPWREISAQVYRTGAQALGITALVGFLIGVVLSYLS 189 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A QL FGA+ F + L+ + +RE+G +L A+++AGRSGSAI A+IG M++ +E+DA+ Sbjct: 190 AQQLQMFGADRFIVRLLGVSIVRELGPVLAAILVAGRSGSAITAQIGVMRVTQELDAMLV 249 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG+ + LI PR+ AL I++PLL + + A++G + + F + + Sbjct: 250 MGISHGQRLILPRVIALAITMPLLVVWTDAMALLGGMLAAQMQLGVSAQWFLTSLPDAIS 309 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L N + G+ K I +VA G + ++ SLG+ TT VV SI+ VI++D+L+A+ Sbjct: 310 LTNYWIGMFKGVSFGILIALVACHFGLCIQPNTESLGRGTTTSVVTSITGVILVDALYAV 369 Query: 367 FYFAIGI 373 + +IGI Sbjct: 370 IFSSIGI 376 >gi|302039183|ref|YP_003799505.1| putative ABC transporter permease [Candidatus Nitrospira defluvii] gi|300607247|emb|CBK43580.1| putative ABC-type transport system, permease component [Candidatus Nitrospira defluvii] Length = 373 Score = 274 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 113/366 (30%), Positives = 182/366 (49%), Gaps = 15/366 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM--- 62 R G W P+++ + + + + + + S I DT GA ++ + Sbjct: 15 GRTLRCRGAWTMPDVAPVERALRRMTWPA--RSALVFEASGIEAFDTGGAVVLYRALMEA 72 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + ++ +QG+ QL SL+S + P++ N I + Sbjct: 73 RRQGCEVSIQGLRPDYAQLMSLVSSHWAAMVAEVAPRQ--------NGSERFRASIRNRV 124 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 LG + AS + + S + + GV +P+ L++F+ G VI Sbjct: 125 AQGAGALEFLGESATALVRLVASPRRLR--WRSCLNSLRLDGVHALPITGLLTFLIGVVI 182 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL +FG IF +DL+ I LREI L+ A++IAGRSGSA A+IG+MK+ EE+D Sbjct: 183 AYQGAEQLRKFGTNIFIVDLVGISLLREIAPLIAAILIAGRSGSAYAAQIGTMKVTEELD 242 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++T GL + +L+ PR+ AL+++LPLLT A+ + G ++ ++ F F SRF Sbjct: 243 ALQTFGLSPIELLVLPRVLALVVALPLLTAYADVLGVFGGMLIASNQLNVSFTAFLSRFE 302 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L ++ GL KAPF A I +V +GF + + +G+ T VVQSI +VII D+ Sbjct: 303 EAVALRHMLIGLGKAPFFAVIIALVGCYQGFQIRGGVDDVGRHTTISVVQSIFLVIIFDA 362 Query: 363 LFAIFY 368 + +I Sbjct: 363 ICSILL 368 >gi|124386096|ref|YP_001027344.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10229] gi|124294116|gb|ABN03385.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10229] Length = 428 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 101/372 (27%), Positives = 176/372 (47%), Gaps = 12/372 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 G TV R G W + ++ +V I + + DLS + +D +G + + Sbjct: 68 GSQGRTV-RLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALW-- 124 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + G+ G++ Q + R + P+ + G+ + F Sbjct: 125 --RVWGRRLPDGIALTDNQRV-VFKRIERLDAGRESPEPVVRIDPVTRF----GQGLFTF 177 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 +LG +I + + +Y G +P+ L++F+ G V Sbjct: 178 GEHLYGGIALLGGLIVDLLAVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIV 235 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 ++ A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+ Sbjct: 236 LSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEEL 295 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+R MG+ + PR+ AL +++PLL + N A+ G ++ I F Sbjct: 296 DAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSL 355 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 S +AN+F GL K I +VA GF + +S SLG+ TT VV SI++VI+ D Sbjct: 356 PSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILAD 415 Query: 362 SLFAIFYFAIGI 373 ++FAI + +G+ Sbjct: 416 AVFAILFQNVGL 427 >gi|119385048|ref|YP_916104.1| hypothetical protein Pden_2317 [Paracoccus denitrificans PD1222] gi|119374815|gb|ABL70408.1| protein of unknown function DUF140 [Paracoccus denitrificans PD1222] Length = 364 Score = 273 bits (699), Expect = 3e-71, Method: Composition-based stats. Identities = 122/366 (33%), Positives = 196/366 (53%), Gaps = 19/366 (5%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 V R AG + + ++ + A + ++LS +T +DT A Y + Sbjct: 18 VLRLAGEFTVWTLGQLPPEAGTA---------SRLELSGLTRLDTAAAW---YLTGRERE 65 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 L G++ QL + + + + G+++V + Sbjct: 66 GASLDGLTGTQAQLLDTVRQALPQPEAESAGPAGWRL-----MLEQTGRRMVAALVFLRE 120 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 A LG ++ F+ SL+ G+ VP+V L+SF+ G V+A QGA Sbjct: 121 IAEYLGRFLAALARGIRHPGDFR--FTSLVYHCQETGLRAVPIVALMSFLIGIVLAFQGA 178 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL QFGAE+F IDL++I LRE+G+LLTA+++AGR+ SA+ A IGSMK+NEEIDA+RT+ Sbjct: 179 VQLRQFGAEVFVIDLIAISILRELGILLTAIIVAGRTASALTASIGSMKMNEEIDAMRTL 238 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GLD +LI PR+ ALII+LP+L ++AN + ++G +++ W I ++F R + ++ Sbjct: 239 GLDPDMVLILPRVLALIITLPILGLIANIAGLVGGALMSWIELGISPSMFRYRLLADTSV 298 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ GL KAP A IG++ G VG + SLG + + VV +I VI+ D+LF+IF Sbjct: 299 DHVIVGLSKAPVFALIIGVIGCHAGMKVGKDAESLGAETSRAVVNAIFAVIVADALFSIF 358 Query: 368 YFAIGI 373 + +G+ Sbjct: 359 FSEVGL 364 >gi|82703102|ref|YP_412668.1| hypothetical protein Nmul_A1981 [Nitrosospira multiformis ATCC 25196] gi|82411167|gb|ABB75276.1| Protein of unknown function DUF140 [Nitrosospira multiformis ATCC 25196] Length = 378 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 91/372 (24%), Positives = 172/372 (46%), Gaps = 12/372 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +GI GN + E + +++ + DL+ I +D GA L+ Sbjct: 18 GADGIPRVIVEGNCTLTALGERIRPIAAELSEYATAPEIRWDLTQIARMDDAGAVLLWRG 77 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + L V E+LF + T + + +GK + Sbjct: 78 WGNQRPRYLL--VRPEHERLFDRLEETWTPPSEAAPDRLWPIMV--------LGKAVFLL 127 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 ++G ++ + + +Y G + + L+ F+ G V Sbjct: 128 WEHLVGLVILMGQLVLEIKYLAGRPSRIP--WREISANLYRTGAQALGITALVGFLIGVV 185 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 ++ + QL FGA +F ++++ I +RE+G +L A+++AGRSGS++ A++G M++ EE+ Sbjct: 186 LSYLSSRQLQIFGAHVFIVNILGISVIRELGPMLAAILVAGRSGSSMTAQLGVMRVTEEL 245 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ MG+ LI P++ AL +++PL+ + + A+IG V + + F SR Sbjct: 246 DALTVMGIPHSLRLILPKVIALGLAMPLVVLWTSAVALIGGMTVAELQLGLGYKFFLSRL 305 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 ++N++ GL K AI +++ G + ++ SLG+ T VV SI++VIIID Sbjct: 306 PDAVAVSNLWLGLGKGIVCGMAIALISCHFGLRIKSNTESLGEGTTNSVVTSITVVIIID 365 Query: 362 SLFAIFYFAIGI 373 ++FA+ + +G+ Sbjct: 366 AIFAVIFSDVGL 377 >gi|197105491|ref|YP_002130868.1| ABC transporter, permease protein [Phenylobacterium zucineum HLK1] gi|196478911|gb|ACG78439.1| ABC transporter, permease protein [Phenylobacterium zucineum HLK1] Length = 375 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 110/370 (29%), Positives = 190/370 (51%), Gaps = 11/370 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 G+W + + + A++ + +DLS + +DT GA ++ Sbjct: 15 RPTVALTGDWTARALGGAGTALAEALDGLT---NIAIDLSGVRRLDTAGAYAVVRAAGPA 71 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 K++ + +L ++ R + ++ + F +L +GK +V F +D Sbjct: 72 FDASKVE-ARPEVRRLLEVVDEAARIQPAVRQEPKGFH-----DLTIRVGKGVVGFGHDF 125 Query: 126 CSQAHILGLVISNTGEFCASSY--KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 LG ++ + K +L+ M G+ +PVV + +F GAV+A Sbjct: 126 IDTMGFLGHLLVVLARSLVLLFVNPRKIRWPALVSIMERAGLDAIPVVAVATFFIGAVVA 185 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 GA L QFGAE+F+++L+ I +RE +++TAV++AGRS S+ AEIGSMK+++EIDA Sbjct: 186 FIGADMLQQFGAEVFAVELIGISMMREFNIVITAVLLAGRSASSFAAEIGSMKMSQEIDA 245 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 ++ MG+D L+ PR AL+I++PLLT +A + ++G +V W + A F R Sbjct: 246 MKVMGIDPFEALVFPRFAALLITIPLLTFVATLAGLLGGIVVTWSVLGLGPAFFLQRIVD 305 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + + + L KAP MA I + ++G G SLG++VT VV +I +I+ID++ Sbjct: 306 NVGVDHFWIALSKAPVMAGVIAGIGCRQGLETGGDVESLGRRVTAAVVHAIFAIIVIDAI 365 Query: 364 FAIFYFAIGI 373 FA+ Y +G+ Sbjct: 366 FAMIYMELGL 375 >gi|220934666|ref|YP_002513565.1| protein of unknown function DUF140 [Thioalkalivibrio sp. HL-EbGR7] gi|219995976|gb|ACL72578.1| protein of unknown function DUF140 [Thioalkalivibrio sp. HL-EbGR7] Length = 375 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 100/368 (27%), Positives = 179/368 (48%), Gaps = 8/368 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 V R AG +S + + + + K VD S + D G L++ + + Sbjct: 16 GVVLRLAGRLDVHTVSTVWGEALAGL-KVRSGRPVRVDTSGVDYCDGAGVALVVDLLRQP 74 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 G+ E++ ++ + + L H+ + Sbjct: 75 RDPGAEVGLGETPEEVRRMLVPFDVRDFSGEAVPPQRGPG----LKQHLANGMHDLGRYL 130 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 Q +G + + + + G + +P+V+LI+F+ G ++A Q Sbjct: 131 YLQVAFVGEATAAMFHAARHPRQVR--WRDALNLAQEAGANALPIVMLIAFLMGVILAFQ 188 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A + QFGAEIF +L+++ LRE+ L+TA+++AGRSG+A AEIG+MK+NEEI+A+ Sbjct: 189 SAVAMRQFGAEIFVANLVALSLLRELAPLMTAILLAGRSGAAFAAEIGTMKVNEEINALT 248 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 TMGLD VR L+ R+ A + +PLLT++AN ++G ++V+ + DIPF +F++ S Sbjct: 249 TMGLDPVRFLVVTRVLAAVAVMPLLTLVANLVGLVGGAVVMKGF-DIPFVTYFNQVTSAV 307 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 TL+++ GL KA + V G + ++G T VV +I ++++ D +FA Sbjct: 308 TLSDLLGGLFKATVFGLLVAGVGCLRGLETRSGAAAVGISTTRAVVSAIILIVVADGVFA 367 Query: 366 IFYFAIGI 373 + ++ + I Sbjct: 368 VVFYHLDI 375 >gi|221199880|ref|ZP_03572923.1| putative ABC transporter, permease protein [Burkholderia multivorans CGD2M] gi|221207452|ref|ZP_03580461.1| putative ABC transporter, permease protein [Burkholderia multivorans CGD2] gi|221172655|gb|EEE05093.1| putative ABC transporter, permease protein [Burkholderia multivorans CGD2] gi|221180119|gb|EEE12523.1| putative ABC transporter, permease protein [Burkholderia multivorans CGD2M] Length = 446 Score = 273 bits (698), Expect = 4e-71, Method: Composition-based stats. Identities = 101/366 (27%), Positives = 171/366 (46%), Gaps = 11/366 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R G W + ++ VV + DLS I +D +G + + + G Sbjct: 91 TVRLTGQWTALALARNRGAVVRRAESVATGSVSEWDLSGIGRLDHVGGQALW----RVWG 146 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + G++ Q ++ R + + P+R L G + F Sbjct: 147 RKLPPGIALTATQ-RTIFERIERLDSQREAPERVVRVGPITRL----GLMLFAFAEHLHG 201 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + G VI + +Y G +P+ L++F+ G V++ A Sbjct: 202 GIAMFGRVILDALSVLRRPQTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 259 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M Sbjct: 260 QQLQMFGANRYIVNILGLAVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 319 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ LI PR+ AL +++PLL + N A+ G ++ I F + Sbjct: 320 GIPHGLRLILPRVLALGVAMPLLVMWTNIVALTGGALAAKMVLGIDVNYFVRSLPGVVPI 379 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN++ GL K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI Sbjct: 380 ANLYIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAIL 439 Query: 368 YFAIGI 373 + +G+ Sbjct: 440 FQNVGL 445 >gi|261885878|ref|ZP_06009917.1| MTA/SAH nucleosidase [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 354 Score = 272 bits (697), Expect = 5e-71, Method: Composition-based stats. Identities = 109/336 (32%), Positives = 178/336 (52%), Gaps = 13/336 (3%) Query: 29 MAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFT 88 ++ + +DL + ID A K++ KL + +++F+L+S Sbjct: 26 KSLKELRSLKVDTLDLKNLIRIDYSAATFF----AKHYNCPKLINSNDKFDKIFALVSDK 81 Query: 89 HRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYK 148 + ++ K ++S NL IGK I+ N+ S LG + N + + + Sbjct: 82 YILNLQIIKFKKS-------NLIEQIGKNIINLKNELVSFCIFLGEFLFNLTKSLLNPFT 134 Query: 149 FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL 208 + L Y G+S V +V L SF+ G V+A QGA L FGA I+ +D+M I+ L Sbjct: 135 VR--FKELSNHFYSAGISAVFIVCLTSFLIGIVLAYQGATMLENFGASIYVVDIMGIMTL 192 Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268 RE+G L+ A+++AGRS S+ A+IG MKI +E++A++TMG + R ++ PR+ ALI+++P Sbjct: 193 REVGPLIAAIVVAGRSASSYTAQIGVMKITDELEAMKTMGFEPFRFIVMPRVLALILAMP 252 Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328 + LAN +I G +V Y D+ F+ + RF S+ L + + GL KAPF I ++ Sbjct: 253 FIVFLANAVSIFGQMMVCNWYLDLSFSDYLERFRSSIALRHFWVGLFKAPFFGAVIALIG 312 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 K GF V NS+G+ T VV I + +D++F Sbjct: 313 CKRGFEVSGSINSVGELTTRSVVHEIFWISALDAIF 348 >gi|114764121|ref|ZP_01443360.1| ABC transporter, inner membrane subunit [Pelagibaca bermudensis HTCC2601] gi|114543479|gb|EAU46494.1| ABC transporter, inner membrane subunit [Roseovarius sp. HTCC2601] Length = 377 Score = 272 bits (697), Expect = 5e-71, Method: Composition-based stats. Identities = 124/375 (33%), Positives = 196/375 (52%), Gaps = 14/375 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 V +G +S + S +VDL+ + IDT GA L++ Sbjct: 14 ETGAEAVLSLSGALSIRTVSVL----RQRFAALGFDRSLVVDLAGVERIDTAGAWLLVDL 69 Query: 62 ---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + G L+ VS L + ++ R + L IG+ + Sbjct: 70 EARAQAAGGSFGLRNVSDTTALLLDNVRQARPEREDRPAAAR-----GIQALLEQIGRAV 124 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 V + LGL ++ G +F+ L +L+ VG+ VP+V L+SF+ Sbjct: 125 VGGLRYFADLTGFLGLFLARLGRVLRHPSQFR--LTALVAHCEDVGLRAVPIVALMSFLI 182 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G V+A QG+ QL QFGAE+F +DL++I LRE+G+LLTA+++AGR+ SA A IGSMK+ Sbjct: 183 GVVLAFQGSEQLRQFGAEVFVVDLIAISVLRELGILLTAIIVAGRTASAFTAAIGSMKMR 242 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+RT+GLD +L PRI AL++ LP+L ++A+F + G +++ W I ++F Sbjct: 243 EEIDAMRTLGLDPGVMLFVPRILALLLMLPILGLIADFMGLFGGALMAWLELGISPSMFV 302 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 +R + ++ GL+KAP A IG+V G V ++ SLG+ + VV +I VI Sbjct: 303 TRLIEGTGVGHLLVGLVKAPAFALIIGVVGCHAGMQVKGNAESLGRMTSGAVVAAIFAVI 362 Query: 359 IIDSLFAIFYFAIGI 373 + D+LF++F+ +GI Sbjct: 363 LADALFSVFFAKVGI 377 >gi|91776717|ref|YP_546473.1| hypothetical protein Mfla_2365 [Methylobacillus flagellatus KT] gi|91710704|gb|ABE50632.1| protein of unknown function DUF140 [Methylobacillus flagellatus KT] Length = 373 Score = 272 bits (696), Expect = 7e-71, Method: Composition-based stats. Identities = 97/373 (26%), Positives = 175/373 (46%), Gaps = 11/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY- 60 G G W + ++ A+ + A DL+ + ++DT GA ++ Sbjct: 11 DTQGGKRIVLNGQWSLRALDNDFAELRRALKPYFSDEKAQWDLTQVEQLDTAGAAVLWNG 70 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 + K G++ L + LF ++ + + P+ + L GK + Sbjct: 71 WQGKMEGRVTL---TDEQVALFDTLASIETTTVAEKPPRFDWL-----KLVAGFGKLTIF 122 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + ++GL++ G F +Y GV+ +PV L+ F+ G Sbjct: 123 ISSHVVDFVKLIGLLVLELGYLLRRPQDFP--WREFSANIYKSGVTALPVTALLGFMIGI 180 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 ++ A QL FGA+IF ++++ + +RE+G +L AV++AGRSGS++ A+IG M++ EE Sbjct: 181 AMSYLMATQLRTFGADIFIVNILGLAVIRELGPILMAVLVAGRSGSSMAAQIGVMRVTEE 240 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ TMG+ + ++ P++ L + P L I + A++G ++ + F FF Sbjct: 241 IDALATMGISRILRVVLPKVLGLTVIAPFLVIWTSCWALLGGALSANIELGLGFRFFFDY 300 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + NI GLIK + ++A G + ++ SL + T+ VV +I+ VI+I Sbjct: 301 LAAVVQPVNITLGLIKGVMFGFIVAVMACHFGLRIKPNTESLSRSTTSSVVTAITCVILI 360 Query: 361 DSLFAIFYFAIGI 373 D+ FAI IG+ Sbjct: 361 DAAFAIITSGIGV 373 >gi|57505618|ref|ZP_00371545.1| conserved hypothetical integral membrane protein [Campylobacter upsaliensis RM3195] gi|57016165|gb|EAL52952.1| conserved hypothetical integral membrane protein [Campylobacter upsaliensis RM3195] Length = 377 Score = 272 bits (695), Expect = 7e-71, Method: Composition-based stats. Identities = 101/337 (29%), Positives = 165/337 (48%), Gaps = 10/337 (2%) Query: 40 AIVDLSAITEIDTIGAELIMYF---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96 I+D + ID G + ++K + +S + LF L +++ +K Sbjct: 48 CILDFHHLEFIDMAGVRFFLALEYELQKRGITSQRVHLSEKFDALFELCEKNYQRILKEP 107 Query: 97 KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156 K L ++G + + +G + + F+ ++ Sbjct: 108 KKHFD-----TAELFVNLGVLSLNLLGILKQFICFVGEFFTAFFQCFKKPKTFR--FVAF 160 Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + + + +P+VIL + + G V+A Q AFQL+QFGA IF +DL+ I RE+ L+ Sbjct: 161 LYHIENSALKALPIVILTALLVGVVLAYQTAFQLAQFGANIFIVDLVGISATRELAPLIA 220 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++IAGRS S+ A+IG MKI +EI A+ TMG +I PR+ AL++++PL+ +++F Sbjct: 221 AIVIAGRSASSYTAQIGVMKITDEIAAMNTMGFSTFHFIIIPRVVALVVAMPLIVAVSDF 280 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 +I G +V DI F F RF L ++ GLIKAP IG++A G V Sbjct: 281 VSIFGGMMVAHLNLDINFIEFLRRFKEAVDLKHVIIGLIKAPIFGFLIGLIACFRGLEVK 340 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + S+G T VV +I VI D+LF++ +GI Sbjct: 341 HTTQSIGIYTTKSVVNAIFWVIAFDALFSVILTQMGI 377 >gi|221211088|ref|ZP_03584067.1| putative ABC transporter, permease protein [Burkholderia multivorans CGD1] gi|221168449|gb|EEE00917.1| putative ABC transporter, permease protein [Burkholderia multivorans CGD1] Length = 446 Score = 272 bits (695), Expect = 8e-71, Method: Composition-based stats. Identities = 101/366 (27%), Positives = 171/366 (46%), Gaps = 11/366 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R G W + ++ VV + DLS I +D +G + + + G Sbjct: 91 TVRLTGQWTALALARNRGAVVRRAESVATGSVSEWDLSGIGRLDHVGGQALW----RVWG 146 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + G++ Q ++ R + + P+R L G + F Sbjct: 147 RKLPPGIALTATQ-RTIFERIERLDSQREAPERIVRVGPVTRL----GLMLFAFAEHLHG 201 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + G VI + +Y G +P+ L++F+ G V++ A Sbjct: 202 GIAMFGRVILDALSVLRRPQTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 259 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M Sbjct: 260 QQLQMFGANRYIVNILGLAVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 319 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ LI PR+ AL +++PLL + N A+ G ++ I F + Sbjct: 320 GIPHGLRLILPRVLALGVAMPLLVMWTNIVALTGGALAAKMVLGIDVNYFVRSLPGVVPI 379 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN++ GL K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI Sbjct: 380 ANLYIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAIL 439 Query: 368 YFAIGI 373 + +G+ Sbjct: 440 FQNVGL 445 >gi|332162490|ref|YP_004299067.1| ABC transporter, membrane permease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325666720|gb|ADZ43364.1| ABC transporter, membrane permease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 354 Score = 271 bits (694), Expect = 1e-70, Method: Composition-based stats. Identities = 114/340 (33%), Positives = 181/340 (53%), Gaps = 2/340 (0%) Query: 33 KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKK 92 ++ Q S + DL+ + +DT GA L+ + + E+ +L+ R Sbjct: 16 RASQPQSVVFDLTQLGALDTAGATLLALLLGDERINHLRELAPKLPEERRTLLETVSRVL 75 Query: 93 IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGF 152 + + + G+ + D S +GL + +++ Sbjct: 76 PDLASESSEKPPSFWLEFLANTGRSVDNLWQDIKSLLGFVGLTLEALFSTIFRPSRWR-- 133 Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 + SLI + +G++ VP+++L++F+ GAVIA GA L+ FGA IF++DL+ LRE Sbjct: 134 MTSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTTFGAGIFTVDLVVFSFLREFA 193 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 VLLTA+++AGR+ SA AEIG MK NEEIDAI+T+GL+ V +L+ PR+ AL+ISLP+LT Sbjct: 194 VLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPVELLVLPRVLALLISLPMLTF 253 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 + I G +V DI +F S ++ L + G+ KAP A I I+ EG Sbjct: 254 IGMICGIFGGMVVCALALDISPTMFLSIMQNSNGLQHFLVGISKAPIFAFLIAIIGCLEG 313 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 F V + S+G TT VV SI +VI++D++ A+F+ +G Sbjct: 314 FKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEMG 353 >gi|302382565|ref|YP_003818388.1| hypothetical protein Bresu_1453 [Brevundimonas subvibrioides ATCC 15264] gi|302193193|gb|ADL00765.1| protein of unknown function DUF140 [Brevundimonas subvibrioides ATCC 15264] Length = 372 Score = 270 bits (692), Expect = 2e-70, Method: Composition-based stats. Identities = 108/373 (28%), Positives = 187/373 (50%), Gaps = 12/373 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + G +V R G+W + + A + ++ VDLS + DT GA ++ Sbjct: 11 ATGGGSVLRLTGDWTTMSLGRTAARLSDGLSGRT---IQSVDLSGLGRFDTAGALALVQA 67 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 K Q +++ ++ RK + + S + +G + Sbjct: 68 SGLTLPKDAWQ-SRPEAGRIYDMVETLERKSMPAPR-----RQASLTRIFARMGHGVHDA 121 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + LG +++ TG + + + Q G+ +P++ + +F GAV Sbjct: 122 AAEFLLSMAFLGRLMAATGNAVRHPGAIR--WPAWVSQAERSGLDAMPIIAVTNFFIGAV 179 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IA GA L+QFGA +F++DL+ + LRE+ VL+TA+++AGRS S+ AE+GSM++N+E+ Sbjct: 180 IAFLGADLLTQFGAGVFAVDLIGVSILRELAVLITAILLAGRSASSFAAEVGSMRMNQEV 239 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA++ MG+D + L+ PR+ A+++ +PLLT + + + G IV W + A F R Sbjct: 240 DAMQVMGVDPFQALVIPRLAAMLVMVPLLTFVGMIAGLFGGLIVTWSQLALGPAFFLQRM 299 Query: 302 HSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 T ++ GL KAP A I + ++G AV SLG++VT VVQ+I +I + Sbjct: 300 VDTPDMFTHMLVGLSKAPVFAIVIAAIGCRQGLAVSGDVESLGRRVTAAVVQAIFAIIFL 359 Query: 361 DSLFAIFYFAIGI 373 D++FA+ Y + I Sbjct: 360 DAVFALIYLELDI 372 >gi|318606570|emb|CBY28068.1| ABC-type transport system involved in resistance to organic solvents, permease component USSDB6A [Yersinia enterocolitica subsp. palearctica Y11] Length = 354 Score = 270 bits (692), Expect = 2e-70, Method: Composition-based stats. Identities = 114/340 (33%), Positives = 181/340 (53%), Gaps = 2/340 (0%) Query: 33 KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKK 92 ++ Q S + DL+ + +DT GA L+ + + E+ +L+ R Sbjct: 16 RASQPQSVVFDLTQLGALDTAGATLLALLLGDERINHLRELAPKLPEERRTLLETVSRVL 75 Query: 93 IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGF 152 + + + G+ + D S +GL + +++ Sbjct: 76 PDLASESSEKPPSFWLEFLANTGRSVDNLWQDIKSLLGFVGLTLEVLFSTIFRPSRWR-- 133 Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 + SLI + +G++ VP+++L++F+ GAVIA GA L+ FGA IF++DL+ LRE Sbjct: 134 MTSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTTFGAGIFTVDLVVFSFLREFA 193 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 VLLTA+++AGR+ SA AEIG MK NEEIDAI+T+GL+ V +L+ PR+ AL+ISLP+LT Sbjct: 194 VLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPVELLVLPRVLALLISLPMLTF 253 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 + I G +V DI +F S ++ L + G+ KAP A I I+ EG Sbjct: 254 IGMICGIFGGMVVCALALDISPTMFLSIMQNSNGLQHFLVGISKAPIFAFLIAIIGCLEG 313 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 F V + S+G TT VV SI +VI++D++ A+F+ +G Sbjct: 314 FKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEMG 353 >gi|255019625|ref|ZP_05291705.1| ABC-type transport system involved in resistance to organic solvents, permease component [Acidithiobacillus caldus ATCC 51756] gi|254970928|gb|EET28410.1| ABC-type transport system involved in resistance to organic solvents, permease component [Acidithiobacillus caldus ATCC 51756] Length = 380 Score = 270 bits (692), Expect = 2e-70, Method: Composition-based stats. Identities = 102/365 (27%), Positives = 171/365 (46%), Gaps = 13/365 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 G W ++ D V + ++ + DL AI +D++GA +I Sbjct: 26 LTLRGRWTLRRLTGAMDRVREQLAQAGRGRP--WDLRAIERLDSVGALVIWRAWG----- 78 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 GV +L + R+ + Q P +G I+ + D Sbjct: 79 ----GVLPADARLSAEQEAVFRRFAQMQTPTAPRRPWGLWARLDALGAHILGVLVDLWGL 134 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +LG +++ F + + G +P++ LI F+ G VI+ Q A Sbjct: 135 FLLLGALLTELWRALRHPRHFP--WREISATVVRTGPDSLPILSLIGFLIGIVISFQSAP 192 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L+ +GA I+ I + + LRE G L+TAV++AGR+GSA A+IG+M++ EE+DA+RT G Sbjct: 193 TLASYGANIYIISIAGLSILREFGPLITAVILAGRTGSAFTAQIGAMRVTEELDALRTFG 252 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + V+ LI P++ AL I+LPLL + + AI+GA IV I + F Sbjct: 253 ISPVQRLILPKVIALAITLPLLVVWTDAVAILGAIIVAKLDLGISASFFLREMPIMVPDF 312 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 N + G+ K I V+ G V +++SL ++ T VV ++++VI+ID++ A+ + Sbjct: 313 NFWLGIGKGILFGILIAWVSGYHGLKVQPNTDSLSRETTDSVVLTLTLVIVIDAVLAMVF 372 Query: 369 FAIGI 373 GI Sbjct: 373 ANTGI 377 >gi|254458263|ref|ZP_05071689.1| stas domain protein [Campylobacterales bacterium GD 1] gi|207085099|gb|EDZ62385.1| stas domain protein [Campylobacterales bacterium GD 1] Length = 357 Score = 270 bits (692), Expect = 2e-70, Method: Composition-based stats. Identities = 102/364 (28%), Positives = 179/364 (49%), Gaps = 8/364 (2%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 +F+G + ++ + + ++ DL + DT + I + K K Sbjct: 2 KFSGEFTLYTVTSYQNKIDEIDFSQVR--KVDFDLEDVVYFDTAASIFINSLIHKLTQKN 59 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 + T + + + +K++K ++ + N IG+ + + + Sbjct: 60 ITSNIITTNKDILDTLELV----LKSKKTSQAIPEETRPNFLNIIGENTYLYYSGFVAFM 115 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 +G + + + + + ++ + + ++ L SF+ G V+A Q A+Q Sbjct: 116 AFIGQLFATKINTLKTIKNIR--FKEIAFEINESAIKALGIISLTSFLIGLVVAYQSAYQ 173 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L +GA IF +D++ I LRE+ L+TA++IAGRSGSA A+IG+MKI EE+DA+RTMG Sbjct: 174 LKIYGANIFIVDMLGISMLRELAPLMTAIVIAGRSGSAFTAQIGAMKITEELDAMRTMGF 233 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 D L+ PRI AL+I++P+L +A+ ++ G +V DI +F RF+ + Sbjct: 234 DPYIFLVLPRIIALMIAMPILIFVADIMSVFGGLLVAVIDLDISPQLFIDRFNDVVAAKH 293 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 F G+ K PF A I + + G V + S+G T VV+SI VII D++F+I + Sbjct: 294 FFIGIGKGPFFAFIIASIGVYRGLEVKDDTQSIGFNTTKSVVESIFAVIICDAIFSILFT 353 Query: 370 AIGI 373 +GI Sbjct: 354 NLGI 357 >gi|170743041|ref|YP_001771696.1| hypothetical protein M446_4933 [Methylobacterium sp. 4-46] gi|168197315|gb|ACA19262.1| protein of unknown function DUF140 [Methylobacterium sp. 4-46] Length = 394 Score = 270 bits (692), Expect = 2e-70, Method: Composition-based stats. Identities = 125/367 (34%), Positives = 200/367 (54%), Gaps = 10/367 (2%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEKYH 66 R G+W + + + VDLS + +DT+GA ++ +E Sbjct: 35 RLTGSWTADQAPAVEAAAAAIAAPGEPGPRVQVDLSGLVRLDTLGAFVLERTRSEIEAAG 94 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 + G L +++ + +G + + + Sbjct: 95 RAVDYAGARPEHRILLREVAYRRDTPPPP-----RRRRLGLLDGLEALGAGLRRLGAEGL 149 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 S LG V++ A +F+ S + QM + G P+++LI+F+ G ++ QQG Sbjct: 150 SWLGFLGEVVAACLRVLARPRRFRA--ASFVNQMEQIAYRGTPIIMLIAFLVGCIVTQQG 207 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 QL +FGA+ F ++++ IL LRE+GVLLTA+M+AGRSGSA AEIGSM++ EE+DA+R Sbjct: 208 IIQLQRFGAQSFVVNMIGILTLRELGVLLTAIMVAGRSGSAFTAEIGSMRMREEVDALRV 267 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MGLD + ILI PRI AL+++LP+L LA+ +A++G ++ Y ++ F F +R + + Sbjct: 268 MGLDPIEILIVPRILALMLALPMLGFLADVAALLGGALTSMAYGNLSFDAFLARLQAVIS 327 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + + G++KAPFMA IGI+A EGF V + SLG+ VT VV+SI +VI++D +FAI Sbjct: 328 VRHGLVGMLKAPFMALIIGIIATSEGFRVEGSAESLGRHVTASVVKSIFMVIVLDGVFAI 387 Query: 367 FYFAIGI 373 F+ AI + Sbjct: 388 FFAAIDL 394 >gi|207727753|ref|YP_002256147.1| abc-type transport system involved in resistance to organic solvents, permease component protein [Ralstonia solanacearum MolK2] gi|206590994|emb|CAQ56606.1| abc-type transport system involved in resistance to organic solvents, permease component protein [Ralstonia solanacearum MolK2] Length = 374 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 101/371 (27%), Positives = 182/371 (49%), Gaps = 12/371 (3%) Query: 4 NGITVFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +G +V +G+W + ++E A ++ ++ L+ + ID GA+L+ Sbjct: 15 DGRSVAYLSGDWTTLALAERAGVRSARRQIRAGLDNANAWCLTEVGRIDHFGAQLLW--- 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + G + + +Q +I R K + + N L G ++ F Sbjct: 72 -RAWGNRWPEHLDARADQ-RRMIDRVARLDPGGWKKRIAPRINPVTVL----GGAMLDFA 125 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ++G ++ + F + + +G + +Y G + + L+ F+ G V+ Sbjct: 126 GHLRIGVAMVGQLMFDLLRFARAPH--RGPWREISANIYSTGYKALGITALVGFLIGIVL 183 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + A QL FGA IF ++++ + +RE+G +L A+++AGRSGSAI A+IG M++ EE+D Sbjct: 184 SYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELD 243 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R MG+ LI P++ AL I++PLL + A+ G + DI F + Sbjct: 244 AMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITSLP 303 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 +AN++ G+ K I +VA G + ++ SLG+ TT VV SI++VI+ D+ Sbjct: 304 DAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITVVILADA 363 Query: 363 LFAIFYFAIGI 373 +FAI + +GI Sbjct: 364 VFAILFKDVGI 374 >gi|312115045|ref|YP_004012641.1| hypothetical protein Rvan_2318 [Rhodomicrobium vannielii ATCC 17100] gi|311220174|gb|ADP71542.1| protein of unknown function DUF140 [Rhodomicrobium vannielii ATCC 17100] Length = 385 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 117/371 (31%), Positives = 190/371 (51%), Gaps = 6/371 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 E G +G+W + + V ++ + +D+ + +DT GA ++ Sbjct: 20 EERGTRRLIVSGDWTLAALGDAQAAVDD--FEAPHGAAHEIDIGDVRRLDTAGALTLVGL 77 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + E L + + + Sbjct: 78 RDGKAAAKTADFFRARPEHRILLDEIARAAPAAFEP--PPPRAGAAVEILRRFLSAATSI 135 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 D+ LG + G +F+ + + Q+ G+S VP++ L+SF+ G V Sbjct: 136 GRDAIRLTMFLGETTAALGRVVVHPGRFR--IKAFTHQLQQTGLSAVPIIALVSFLIGGV 193 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 + QQ AFQL +FGAE SID++ IL LRE+GV+L AVM+AGRS SA A+IG+MK+ EEI Sbjct: 194 VMQQSAFQLQKFGAETMSIDMLGILALRELGVILAAVMVAGRSASAFTAQIGTMKMREEI 253 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+RT+G+D + L+ PR+ AL+I+LPLL LA+ A+ G +++ Y + ++ R Sbjct: 254 DAMRTLGIDPIETLVLPRVLALMIALPLLVFLADMMALAGGAVMAKLYLSLDTDMYLQRL 313 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 +S+ +++ GLIKAPF A IG+V EG + + S+G +VTT VV++I +V+++D Sbjct: 314 NSSVQAKHLYVGLIKAPFAALVIGLVGCLEGLSAQGSAESVGTQVTTAVVKAIFLVLVLD 373 Query: 362 SLFAIFYFAIG 372 ++FAIF A G Sbjct: 374 AVFAIFLSAAG 384 >gi|297538919|ref|YP_003674688.1| hypothetical protein M301_1733 [Methylotenera sp. 301] gi|297258266|gb|ADI30111.1| protein of unknown function DUF140 [Methylotenera sp. 301] Length = 378 Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats. Identities = 105/375 (28%), Positives = 184/375 (49%), Gaps = 11/375 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAEL---I 58 S N + +G W + + I + + AI +I+ + + D S + +D GA + + Sbjct: 12 SMNALPNLTLSGAWVASTLHNIVEKI-HAIPTTIE-LNIVADGSGVEALDMSGAWVMQSL 69 Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ I L G + ++ + + ++ L HIG Sbjct: 70 FSLLKAQGNSITLIGFKPEFVERLKVV----TYEFSHHANPQNNIEIKPPTLLEHIGMAT 125 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + + ++ +G V S A + + ++ + G++ VP+V +++F+ Sbjct: 126 TEALKEAKDLLSFVGEVSSVFLASFADPQRIR--WRPILFNIREAGLNAVPIVGILAFLL 183 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G V+A Q A QL +GA IF +DL+ I LRE L+ A++IAGRSGSA A+IG+M + Sbjct: 184 GVVVAYQSADQLRHYGANIFVVDLIGISMLREFAPLIAAIIIAGRSGSAYAAQIGTMSVT 243 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+R +G+ + +L+ P++ L ISLPLLT+ A+ I G + D+ F F Sbjct: 244 EEIDAMRILGIAPMEMLVLPKLIGLAISLPLLTVWADMLGIFGGMLTASAQLDVSFVDFV 303 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 R + GL KA A I ++ +GF ++++G++ T VVQSI +VI Sbjct: 304 GRLVKAVEMTTYTVGLGKAFVFAIIITMIGCFQGFRTKGGADNVGRQTTRSVVQSIFLVI 363 Query: 359 IIDSLFAIFYFAIGI 373 + D+LF++ + + I Sbjct: 364 VADALFSVLFSILKI 378 >gi|56479165|ref|YP_160754.1| ABC transporter permease [Aromatoleum aromaticum EbN1] gi|56315208|emb|CAI09853.1| Possible ABC transport permease [Aromatoleum aromaticum EbN1] Length = 374 Score = 269 bits (689), Expect = 4e-70, Method: Composition-based stats. Identities = 97/372 (26%), Positives = 181/372 (48%), Gaps = 12/372 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 R G+W ++ AD+ + ++ +A L +T +D+ GA L+ + Sbjct: 13 GSGARPECRLEGDWTLRALAPRADEFRRLLARA--GPAASWKLDGVTRLDSFGATLLWHA 70 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + Q +S ++L ++I + R+F + +G ++ F Sbjct: 71 WREQW----PQDLSAD-DELRAVIGRIEATAAEPLPEARAFT---LTDAIVVLGAGLLGF 122 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 N + + G + + + L + +Y VG PV L+ F+ G V Sbjct: 123 ANHLAAFVQLAGQLCLDIAYLLRHPRDWP--LREISANLYKVGARATPVAALVGFLIGVV 180 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 ++ A QL FGA+I+ ++++ + +RE+G +L +V++AGRSGSA+ A++G M++ +E+ Sbjct: 181 LSYLSALQLQAFGADIYIVNILGLGIVRELGPVLVSVLVAGRSGSAMTAQLGVMRVTDEL 240 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ MG+ L+ P++ AL +++PLL + + A+ G + W D+ F F Sbjct: 241 DALSAMGISRTVRLVLPKVVALTVAMPLLVLWTSAVALFGGMVSAWVQLDLGFGFFLDTL 300 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 +AN++ GL K +I +VA G V ++ SL T VV +I++VI+ID Sbjct: 301 PRVVPVANLYIGLAKGAVFGLSIALVACHFGLRVRPNTESLSANTTASVVSAITVVILID 360 Query: 362 SLFAIFYFAIGI 373 ++FAI +IG+ Sbjct: 361 AVFAIATRSIGV 372 >gi|167561346|ref|ZP_02354262.1| ABC transporter, permease protein [Burkholderia oklahomensis EO147] gi|167568578|ref|ZP_02361452.1| ABC transporter, permease protein [Burkholderia oklahomensis C6786] Length = 374 Score = 269 bits (689), Expect = 4e-70, Method: Composition-based stats. Identities = 96/366 (26%), Positives = 175/366 (47%), Gaps = 11/366 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R G W + ++ +V I + + DLS + +D +G + + + G Sbjct: 19 TVRLYGQWTALALARDRGNVARRIARLAKEPVGEWDLSGVVRLDHVGGQALW----RVWG 74 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + +G++ Q ++ R + P+ + G+ + F Sbjct: 75 RRLPEGLALTDNQ-RTVFERIERLDEGREAPEPVVRIDPITRF----GQGLFTFGEHLYG 129 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +LG ++ + + +Y G +P+ L++F+ G V++ A Sbjct: 130 GIGLLGRLVIDLLSVLRRPRTMP--WTEISANVYAAGAKALPITALVAFLIGIVLSYLSA 187 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M Sbjct: 188 QQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ + PR+ AL +++PLL + N A+ G ++ I F S + Sbjct: 248 GIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLAIDLNFFVRSLPSVVPI 307 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN++ GL K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI Sbjct: 308 ANLWIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAIL 367 Query: 368 YFAIGI 373 + +G+ Sbjct: 368 FQNVGL 373 >gi|315639122|ref|ZP_07894289.1| ABC superfamily ATP binding cassette transporter, ABC protein [Campylobacter upsaliensis JV21] gi|315480826|gb|EFU71463.1| ABC superfamily ATP binding cassette transporter, ABC protein [Campylobacter upsaliensis JV21] Length = 368 Score = 269 bits (688), Expect = 5e-70, Method: Composition-based stats. Identities = 101/337 (29%), Positives = 166/337 (49%), Gaps = 10/337 (2%) Query: 40 AIVDLSAITEIDTIGAELIMYF---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96 I+D + ID G + ++K + +S + LF L +++ +K Sbjct: 39 CILDFHHLEFIDMAGVRFFLALEYELQKRGIVSQRVHLSEKFDALFELCEKNYQRILKEP 98 Query: 97 KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156 K L ++G + + +G + ++ F+ ++ Sbjct: 99 KKHFD-----TAELFVNLGVLSLNLLGILKQFICFVGEFFTAFFQYFKKPKAFR--FIAF 151 Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + + + +P+VIL + + G V+A Q AFQL+QFGA IF +DL+ I RE+ L+ Sbjct: 152 LYHIENSALKALPIVILTALLVGVVLAYQAAFQLAQFGANIFIVDLVGISATRELAPLIA 211 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A++IAGRS S+ A+IG MKI +EI A+ TMG +I PR+ AL++++PL+ +++F Sbjct: 212 AIVIAGRSASSYTAQIGVMKITDEIAAMNTMGFSTFHFIIIPRVIALVVAMPLIVAVSDF 271 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 +I G +V DI F F RF L ++ GLIKAP IG++A G V Sbjct: 272 VSIFGGMMVAHLNLDINFIEFLRRFKEAVDLKHVIIGLIKAPIFGFLIGLIACFRGLEVK 331 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + S+G T VV +I VI D+LF++ +GI Sbjct: 332 HTTQSIGIYTTKSVVNAIFWVIAFDALFSVILTQMGI 368 >gi|313108528|ref|ZP_07794529.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016] gi|310881031|gb|EFQ39625.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016] Length = 343 Score = 269 bits (688), Expect = 6e-70, Method: Composition-based stats. Identities = 110/340 (32%), Positives = 179/340 (52%), Gaps = 2/340 (0%) Query: 33 KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKK 92 +S + +A DLS + +DT GA L+ + + + + +L+ Sbjct: 5 RSEVAGNASFDLSQLGALDTAGAALLAELLGAERLADLAELEPSLPRERQALLKTVGHAL 64 Query: 93 IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGF 152 +P++ + L IG + F + +GL + ++ Sbjct: 65 HDFCEPEKPKPPTTAIELLARIGCAMETFWLHLKALLGFIGLTLETLLRSLVRPASWR-- 122 Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 + L+ + G+ VP++ L++F+ GAVIA GA L+ FGA I++++L+ LRE Sbjct: 123 VTPLVANIEKSGLDAVPIIALLTFLVGAVIAFLGATVLANFGATIYTVNLVVFSFLREFA 182 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 VLLTA+++AGR+ SA A+IGSMK NEEIDAIR +GL+ + +L+ PR+ AL++SLP+LT Sbjct: 183 VLLTAILMAGRTASAFTAQIGSMKANEEIDAIRALGLNPIELLVLPRVLALLVSLPMLTF 242 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 + I+G V DIP A+F S + + G+ KAP A I ++ EG Sbjct: 243 VGMLCGIVGGMTVCAWTLDIPPAMFLSIMEDGIGVQHFLVGISKAPLFAFLIAVIGCLEG 302 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 F V + S+G+ TT VV SI +VI++D+L A+F+ +G Sbjct: 303 FKVSGSAQSVGEHTTTSVVHSIFVVILLDALAALFFMEMG 342 >gi|134297087|ref|YP_001120822.1| hypothetical protein Bcep1808_2996 [Burkholderia vietnamiensis G4] gi|134140244|gb|ABO55987.1| protein of unknown function DUF140 [Burkholderia vietnamiensis G4] Length = 374 Score = 269 bits (687), Expect = 7e-70, Method: Composition-based stats. Identities = 104/372 (27%), Positives = 176/372 (47%), Gaps = 12/372 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 E G TV R G W + ++ + + + DLS I +D +G + + Sbjct: 14 GEQGQTV-RLYGQWTALALARNRGAITRRVAGLASARPREWDLSGIERLDHVGGQALW-- 70 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + G+ GV Q ++ R + + P+R ++ L G I F Sbjct: 71 --RVWGRKLPAGVELSDTQ-RTIFERIERLDSQREAPERVVRFDPVTRL----GLAIFTF 123 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + G VI + +Y G +P+ L++F+ G V Sbjct: 124 GEHLQGGIAMFGRVILDALSVLRRPQTMP--WKETSANIYSAGAQALPITALVAFLIGIV 181 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 ++ A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A IG M++ EE+ Sbjct: 182 LSYLSAQQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITARIGVMRVTEEL 241 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+R MG+ L+ PR+ AL +++PLL + N A+ G ++ I F F Sbjct: 242 DAMRVMGIPHGLRLVLPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLAIDFNYFVRSL 301 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 +AN++ G+ K I +VA GF + +S SLG+ TT VV SI++VI+ D Sbjct: 302 PGVVPIANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILAD 361 Query: 362 SLFAIFYFAIGI 373 ++FAI + +G+ Sbjct: 362 AVFAILFQNVGL 373 >gi|167617722|ref|ZP_02386353.1| ABC transporter, permease protein [Burkholderia thailandensis Bt4] gi|257140414|ref|ZP_05588676.1| ABC transporter, permease protein [Burkholderia thailandensis E264] Length = 374 Score = 269 bits (687), Expect = 7e-70, Method: Composition-based stats. Identities = 98/366 (26%), Positives = 175/366 (47%), Gaps = 11/366 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R +G W + ++ +V I + + DLS + +D +G + + + G Sbjct: 19 TVRLSGQWTALALARDRGNVARRIARLAKEPVGEWDLSGVDRLDHVGGQALW----RVWG 74 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + G++ Q ++ R + P+ + G+ + F Sbjct: 75 RRLPAGIALTDNQ-RTVFERIERLDAGREAPEPVVRIDPVTRF----GQGLFTFGEHLYG 129 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +LG +I + + +Y G +P+ L++F+ G V++ A Sbjct: 130 GIALLGGLIVDLLSVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIVLSYLSA 187 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M Sbjct: 188 QQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ + PR+ AL +++PLL + N A+ G ++ I F S + Sbjct: 248 GIPHGLRITLPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDLNFFVRSLPSVVPI 307 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN+F GL K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI Sbjct: 308 ANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAIL 367 Query: 368 YFAIGI 373 + +G+ Sbjct: 368 FQNVGL 373 >gi|307720548|ref|YP_003891688.1| hypothetical protein Saut_0627 [Sulfurimonas autotrophica DSM 16294] gi|306978641|gb|ADN08676.1| protein of unknown function DUF140 [Sulfurimonas autotrophica DSM 16294] Length = 368 Score = 269 bits (687), Expect = 8e-70, Method: Composition-based stats. Identities = 108/373 (28%), Positives = 188/373 (50%), Gaps = 14/373 (3%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + ++G++ F+G +++ ++ NK S I++L+ +DT A + Sbjct: 10 VQKDGLS-LDFSGELTLYNLTQ--AQNLIETNKLSNSQKIIINLANAQYLDTAFALFLTD 66 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 E+Y+ +I+ + L ++ N + K++ + GK + Sbjct: 67 IQEEYNAEIECNN--KNFLHTLELTREHKKRLDSNDDIHK-------KSIFEYFGKIFYE 117 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 S +G + + + S + + + ++ V + +V L SF+ G Sbjct: 118 SYLSFISFMEFIGKIFISFLLYFKSIKNIR--IKEIAFEINESAVRALGIVALTSFLIGL 175 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V A Q A+QL ++G IF +D+M I RE+ L+TA++IAGRSGSA A+IG+MKI +E Sbjct: 176 VTAYQAAYQLQRYGGNIFIVDMMGISVFRELAPLITAIVIAGRSGSAYTAQIGAMKITQE 235 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+RTMG D L+ PRI ALII LP+L +++ A++G IV D+ ++F +R Sbjct: 236 IDAMRTMGFDPYTFLVLPRIIALIIMLPILIFVSDMMAMLGGIIVADLSLDLIPSLFINR 295 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + + + GL+K PF A I + + G V + S+G T VV+S+ VI+ Sbjct: 296 LSEVVAIKHFYVGLVKGPFFAFLIASIGIYRGLMVKDDTQSIGFNTTKSVVESLFAVIVC 355 Query: 361 DSLFAIFYFAIGI 373 D++F+I + +GI Sbjct: 356 DAIFSIAFTNLGI 368 >gi|163744195|ref|ZP_02151555.1| ABC transporter, inner membrane subunit [Oceanibulbus indolifex HEL-45] gi|161381013|gb|EDQ05422.1| ABC transporter, inner membrane subunit [Oceanibulbus indolifex HEL-45] Length = 376 Score = 269 bits (687), Expect = 8e-70, Method: Composition-based stats. Identities = 130/370 (35%), Positives = 209/370 (56%), Gaps = 13/370 (3%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME-- 63 + G+ +++ + D + S ++++D++ + IDT GA +++ Sbjct: 18 GSRLSICGDLDIGKVACLDRDWLH----SEMHGASVIDIAGLARIDTAGAWVLIDLQAHA 73 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 G L+G + QL + + P +S + +G+ +V + Sbjct: 74 TVPGGAALEGATQAQAQLIETVRRSMLSDAVAAPPTKS-----VGDRLEILGRTVVLGAH 128 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 + + LG V++ G A + + L SL+ VG++ VP+V L+SF+ G V+A Sbjct: 129 KTVALISFLGQVVATMGGILAHPSRLR--LTSLVHHCQEVGLNAVPIVALMSFLIGVVLA 186 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 QGA QL QFGAE+F +DL++I LRE+G+LLTA+++AGRSGSA A IGSMK+ EE+DA Sbjct: 187 FQGAAQLRQFGAEVFVVDLIAISVLRELGILLTAIIVAGRSGSAFTAAIGSMKMREEVDA 246 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +RT+GLD V IL+ PR+ AL++ LP L +A+ S ++G +I+ W + AVF R S Sbjct: 247 MRTIGLDPVTILVVPRVLALMLMLPALGFIADISGLLGGAIMSWIDLGVSPAVFQMRLTS 306 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + + G+IKAPF A IGI+ EG VG + SLG+ +T VV SI +VI+ D++ Sbjct: 307 NTDVWHFGVGMIKAPFFALIIGIIGCFEGLKVGGDAESLGRLTSTSVVLSIFMVIVADAM 366 Query: 364 FAIFYFAIGI 373 F+IF+ +G+ Sbjct: 367 FSIFFAIVGV 376 >gi|224371971|ref|YP_002606137.1| ABC-type transporter, permease protein [Desulfobacterium autotrophicum HRM2] gi|223694690|gb|ACN17973.1| ABC-type transporter, permease protein [Desulfobacterium autotrophicum HRM2] Length = 373 Score = 268 bits (686), Expect = 8e-70, Method: Composition-based stats. Identities = 108/372 (29%), Positives = 179/372 (48%), Gaps = 15/372 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY----F 61 T +G+ +S++ + A+ + ++DL + +D+ GA L+ + + Sbjct: 13 GTTVTLSGSLDIAGVSKVWEKAEKAL---FGTGDLVIDLKRVDHMDSAGAALVWFIKTTW 69 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 ++ GKI + G+ +Q+ L + + GK Sbjct: 70 KQRTGGKISVLGLKPAFKQVMDLTETIPDTRDGE-----KKPKKKPPSFVETRGKNFADQ 124 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + + S ++G + + + GV+ +P+V LISF+ G V Sbjct: 125 MEKATSFIALVGQITRALIHAFFHPLSVR--WKDALLTAERSGVNALPIVALISFIVGLV 182 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A Q A + FGAEI+ +L+ I +RE+G L+TA+++AGRSGSA AEIG+MKINEEI Sbjct: 183 MAFQAAMPMKMFGAEIYVANLIGIAMVRELGPLMTAIILAGRSGSAFAAEIGTMKINEEI 242 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ TMGLD VR L+ PRI A + PLLTI +NF I+G SIV+ P ++S+ Sbjct: 243 DALSTMGLDPVRFLMVPRILAAVFITPLLTIFSNFVGIMGGSIVL-LSMGYPAITYYSQV 301 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 S T + GL+K I G ++G T+ VV I+++ + D Sbjct: 302 ISFVTWIDFTGGLVKCFVFGILISAAGCIRGIETQSGPGAVGASTTSAVVTGITLIAVFD 361 Query: 362 SLFAIFYFAIGI 373 +F++ ++ +GI Sbjct: 362 GIFSVLFYCLGI 373 >gi|241668212|ref|ZP_04755790.1| ABC-type transport system permease protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876747|ref|ZP_05249457.1| ABC transporter, permease protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842768|gb|EET21182.1| ABC transporter, permease protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 365 Score = 268 bits (686), Expect = 1e-69, Method: Composition-based stats. Identities = 106/350 (30%), Positives = 179/350 (51%), Gaps = 4/350 (1%) Query: 17 SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVST 76 + +I ++ + D +DL+ +T +DT GA +I+ + ++ + + Sbjct: 15 ILTLKQIDSKLIDKKISRSKDDIKQIDLTKVTLLDTAGAYIIIKTAKNL--RLSKENIIF 72 Query: 77 HIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVI 136 E+ +L+ + + + S N N Y +GK +++ + LG + Sbjct: 73 ANEKDKNLVDIVFKNFPSTAEEELSNKSNVVFNSIYTLGKNTNNLLSEVKTSISFLGAIF 132 Query: 137 SNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE 196 +K F ++ Y + + +VIL+S + G V+ L Q+G + Sbjct: 133 LGYITLIRRP--YKAFFSIVLNICYDSTIRALSIVILLSLIIGLVLTYLPLNLLMQYGTQ 190 Query: 197 IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILI 256 IF +D++ I RE L TA++IAGRSGSA +EIG MK+NEEIDA++T+G D ++ L+ Sbjct: 191 IFVVDMLGISSFREFAPLFTAIIIAGRSGSAFTSEIGIMKVNEEIDALQTIGEDPMQRLV 250 Query: 257 SPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316 PRI AL+ISLP+LT++A + I G I+ I F R S + + + GL+K Sbjct: 251 LPRITALVISLPVLTVIAMIANIAGGIIIADLIAGITPLQFIERLFSNVNVNHFYIGLLK 310 Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 PF A I + +G +V S S+GK TT VV SI ++I++D++FA+ Sbjct: 311 TPFFALVIAGIGCHQGLSVKRDSQSVGKATTTSVVYSIFLIILVDAIFAV 360 >gi|301057238|ref|ZP_07198367.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300448689|gb|EFK12325.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 352 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 106/357 (29%), Positives = 182/357 (50%), Gaps = 12/357 (3%) Query: 19 EISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---KYHGKIKLQGVS 75 + ++ ++ D VDL +T +D G +++ + K HG L+ Sbjct: 5 NAGSLIQELSQHFAENPPGD-LTVDLENVTYLDDFGTLVLVELRKLAAKEHGAFNLENTG 63 Query: 76 THIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLV 135 I ++ ++F + + SF + + +G+K I D +G + Sbjct: 64 KKIREMLMFLNF------DSLFQKVSFEKKRRQGIFVRLGEKTFDIILDLKYAISFIGAI 117 Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + G A + + M GV G+P+V LISF+ G ++A + QL QFGA Sbjct: 118 TLSLGYHLAHPRALRKD--DTLDYMQKTGVDGLPIVALISFLMGLIMAFMSSVQLEQFGA 175 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 I+ L+S+ RE+G ++TA+++AGRSGSA AEIG+MKI+EE+DA+ TMG D V L Sbjct: 176 NIYVASLVSLAMTRELGPIMTAIIVAGRSGSAFAAEIGTMKISEEVDALYTMGFDPVGFL 235 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + P++ A +I +P+LT+ ++ AI G +V D+ + ++ +T L ++F G++ Sbjct: 236 VIPKLIAALIMVPILTLFSDIFAIAGGLLVGVFMLDLTVGAYVAQTINTLALFDVFWGVL 295 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 K+ A I V GF V + S+G+ T+ VV SI ++I+ DS+F++ G Sbjct: 296 KSGVFALLITWVGCLRGFQVSGGAASVGQATTSAVVSSIFLIILFDSVFSVVLRYTG 352 >gi|167585308|ref|ZP_02377696.1| hypothetical protein BuboB_08232 [Burkholderia ubonensis Bu] Length = 374 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 99/368 (26%), Positives = 175/368 (47%), Gaps = 11/368 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 R G W + ++ V + + DLS I ID +G + + + Sbjct: 17 GPTVRLYGQWTALALARNRGAVARRVAGLAKGRVREWDLSGIERIDHVGGQALW----RV 72 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 G+ G++ Q ++ R + + P+R + L G+ + F Sbjct: 73 WGRKLPDGIALSETQ-RTIFERIERLDRQREAPERIERIDPVTRL----GRALFTFAEHL 127 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + G V+ + +Y G +P+ L++F+ G V++ Sbjct: 128 QGGIAMFGRVMLDALSVLRRPKTMP--WKETSANVYSAGAQALPITALVAFLIGIVLSYL 185 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R Sbjct: 186 SAQQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMR 245 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MG+ L+ PR+ AL +++PLL + N A+ G ++ I F+ F Sbjct: 246 VMGIPHGLRLVLPRVLALGVAMPLLVMWTNIIALTGGALAAKLALGIDFSFFVRSLPGVV 305 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 +AN++ GL K I +VA GF + +S SLG+ TT VV SI++VI+ D++FA Sbjct: 306 PIANLYIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFA 365 Query: 366 IFYFAIGI 373 + + +G+ Sbjct: 366 MLFQNVGL 373 >gi|167579644|ref|ZP_02372518.1| ABC transporter, permease protein [Burkholderia thailandensis TXDOH] Length = 374 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 98/366 (26%), Positives = 175/366 (47%), Gaps = 11/366 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R +G W + ++ +V I + + DLS + +D +G + + + G Sbjct: 19 TARLSGQWTALALARDRGNVARRIARLAKEPVGEWDLSGVDRLDHVGGQALW----RVWG 74 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + G++ Q ++ R + P+ + G+ + F Sbjct: 75 RRLPAGIALTDNQ-RTVFERIERLDAGREAPEPVVRIDPVTRF----GQGLFTFGEHLYG 129 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +LG +I + + +Y G +P+ L++F+ G V++ A Sbjct: 130 GIALLGGLIVDLLSVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIVLSYLSA 187 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M Sbjct: 188 QQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ + PR+ AL +++PLL + N A+ G ++ I F S + Sbjct: 248 GIPHGLRITLPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDLNFFVRSLPSVVPI 307 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN+F GL K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI Sbjct: 308 ANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAIL 367 Query: 368 YFAIGI 373 + +G+ Sbjct: 368 FQNVGL 373 >gi|270159818|ref|ZP_06188474.1| putative ABC transporter permease [Legionella longbeachae D-4968] gi|289165424|ref|YP_003455562.1| ABC transporter permease protein [Legionella longbeachae NSW150] gi|269988157|gb|EEZ94412.1| putative ABC transporter permease [Legionella longbeachae D-4968] gi|288858597|emb|CBJ12478.1| putative ABC transporter permease protein [Legionella longbeachae NSW150] Length = 375 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 103/373 (27%), Positives = 187/373 (50%), Gaps = 14/373 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61 + + G W +I + + ++ ++ + I+ D+ GA ++ Sbjct: 11 DKERIRYHCTGIWSVLQIDSLVKRF--SADELPETKKVTISGEGISHFDSAGALALIKCI 68 Query: 62 --MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 +E+ +++L + +QL LI + + + P +NL Y +GK+ Sbjct: 69 DKLEQRENQVELTDFTETQQQLLELI-KSKKDILDYHIPS-----APKENLFYQLGKESE 122 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 ++G + + E + +F+ L S+I +Y GV+ +P++ L+SF+ G Sbjct: 123 NKFRQVDGLLVLVGDLTTKIIEAFGNWRRFQ--LPSIISNIYTTGVTALPILALLSFLIG 180 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A Q QL +GA F L + RE L+TA+++AGR+ SA A+IGSMK+NE Sbjct: 181 VVLAYQMGLQLQTYGANSFIAYLSGMAIFREFAPLITAIIVAGRTSSAFTAQIGSMKLNE 240 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DA+ TMGL +L+ P++ L+I+ PLL ++ +I+G+ I+ I F F Sbjct: 241 EVDALLTMGLSPTELLVLPKVIGLLIAFPLLIFWSDLFSILGSMIMSNNMLGINFTDFLQ 300 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN-SLGKKVTTCVVQSISIVI 358 R T L+ + GL KAP A I +V +GF V + ++G + T VVQ++ ++I Sbjct: 301 RLRDTVGLSQLNLGLYKAPAFALLIALVGCFQGFKVEAGTEKNIGSQTTKSVVQALFLII 360 Query: 359 IIDSLFAIFYFAI 371 I D+++++ Y + Sbjct: 361 IADAIYSVIYSRM 373 >gi|88810292|ref|ZP_01125549.1| hypothetical protein NB231_14468 [Nitrococcus mobilis Nb-231] gi|88791922|gb|EAR23032.1| hypothetical protein NB231_14468 [Nitrococcus mobilis Nb-231] Length = 364 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 95/363 (26%), Positives = 183/363 (50%), Gaps = 17/363 (4%) Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH---G 67 +G+W ++ + + N + S ++L I+ +DT GA ++ + Sbjct: 12 CSGDWSVERLAAVERQIRR--NAPMTSGEWRINLGEISTLDTAGAVMVQRLCRRLRTAGA 69 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 ++L+ VS + L++ + + N +G+++ Sbjct: 70 SVQLEDVSAERHAVLKLVASEMEVTPRRP----------YSNPLERLGRRVTDGCFGITE 119 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +G + +++ ++ + + ++ GV +P++ L++F+ G V+A Q Sbjct: 120 YLAFIGRLTADSLPRMLRPHRLR--WHEIAVELERAGVMAIPIIGLLAFLIGIVMAYQSG 177 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L +GA IF +DL+ ++ LRE+G L+TAV++AGR+G++ A+IG+M + EE+DA+RTM Sbjct: 178 DILQTYGANIFLVDLLGVIILREMGPLMTAVIVAGRTGASYTAQIGTMHLTEEVDALRTM 237 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ +L+ P+ AL+I+LPLLT+ A+ ++G +V Y + F VF R + Sbjct: 238 GVTPFEMLVLPKFLALLIALPLLTVWADAIGLLGGMLVSSLLYGVDFDVFLRRLPTAVPP 297 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + G+ KAP A I + +GF + ++ +G+ T VVQ I VI+ D++F+I Sbjct: 298 NMFWVGIAKAPVFAALIASIGCYQGFRIRYSADEVGRYTTISVVQGIFWVIVADAVFSIV 357 Query: 368 YFA 370 F+ Sbjct: 358 LFS 360 >gi|296388302|ref|ZP_06877777.1| ABC transporter permease [Pseudomonas aeruginosa PAb1] Length = 343 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 110/340 (32%), Positives = 178/340 (52%), Gaps = 2/340 (0%) Query: 33 KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKK 92 +S + +A DLS + +DT GA L+ + + + +L+ Sbjct: 5 RSEVAGNASFDLSQLGALDTAGAALLAELLGAERLADLAELEPGLPRERQALLKTVGHAL 64 Query: 93 IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGF 152 +P++ + L IG + F + +GL + ++ Sbjct: 65 HDFCEPEKPKPPTTAIELLARIGCAMETFWLHLKALLGFIGLTLETLLRSLVRPASWR-- 122 Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 + L+ + G+ VP++ L++F+ GAVIA GA L+ FGA I++++L+ LRE Sbjct: 123 VTPLVANIEKSGLDAVPIIALLTFLVGAVIAFLGATVLANFGATIYTVNLVVFSFLREFA 182 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 VLLTA+++AGR+ SA A+IGSMK NEEIDAIR +GL+ + +L+ PR+ AL++SLP+LT Sbjct: 183 VLLTAILMAGRTASAFTAQIGSMKANEEIDAIRALGLNPIELLVLPRVLALLVSLPMLTF 242 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 + I+G V DIP A+F S + + G+ KAP A I ++ EG Sbjct: 243 VGMLCGIVGGMTVCAWTLDIPPAMFLSIMEDGIGVQHFLVGISKAPLFAFLIAVIGCLEG 302 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 F V + S+G+ TT VV SI +VI++D+L A+F+ +G Sbjct: 303 FKVSGSAQSVGEHTTTSVVHSIFVVILLDALAALFFMEMG 342 >gi|315498539|ref|YP_004087343.1| hypothetical protein Astex_1526 [Asticcacaulis excentricus CB 48] gi|315416551|gb|ADU13192.1| protein of unknown function DUF140 [Asticcacaulis excentricus CB 48] Length = 377 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 105/363 (28%), Positives = 172/363 (47%), Gaps = 6/363 (1%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 V G+W + + + + + A+ + DL DT GA + + Sbjct: 18 VVSLTGDWTAIGLRDAGERLKSALKSASAVRVETDDLKG---FDTAGAYALRTALGALGD 74 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + ++ LI + ++ QK + +G+ ND Sbjct: 75 DALFSH-DPRLSAVYELIRDIQPQVVEAQKKTAQQKAHPIIAELAQLGRNTEDVFNDLRD 133 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +G +I + + + L+ QM G + VV + +F GAVIA G Sbjct: 134 LNVFIGQLIVTAFMSLVTPGRIR--WTPLVAQMQQAGFGALMVVCVTNFFVGAVIAFLGI 191 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL QFGA +F+++L+ I LRE G ++ AV+IAGRS S+ AEIG+MK+N+EI A+R M Sbjct: 192 LQLQQFGAAVFAVELIGISVLREFGPVIAAVLIAGRSASSFTAEIGAMKMNQEISAMRVM 251 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ LI PR+ AL++++PL+T + + ++G +V+W F R Sbjct: 252 GINPFDALIFPRLAALVLTMPLITFAGSMAGLLGGFVVVWAQLGYGPHFFSIRMTEYVPF 311 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 N F G+IK P A AI I+ + G V SLG++VT VVQ+I +I+ID++ A+ Sbjct: 312 VNFFVGMIKVPLFAIAITIIGCRLGMNVTEDVISLGRQVTRAVVQAIFTIILIDAIVAMM 371 Query: 368 YFA 370 + Sbjct: 372 FNG 374 >gi|302342029|ref|YP_003806558.1| hypothetical protein Deba_0592 [Desulfarculus baarsii DSM 2075] gi|301638642|gb|ADK83964.1| protein of unknown function DUF140 [Desulfarculus baarsii DSM 2075] Length = 380 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 95/366 (25%), Positives = 177/366 (48%), Gaps = 11/366 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G G ++ E + + K + S ++DLS + +DT GA + + Sbjct: 19 GGDLHVSLRGRLGVNQLPE-FQTAIARVLKELAPRSVLLDLSRLDYLDTSGAMAVKIWAA 77 Query: 64 KYHGK--IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 ++L+ + + +LI +K +R + +G+ + Sbjct: 78 APPQDLAVRLEAGQSRFRDMLALIDVDQVRKPAINPDKRD------AGMLEGMGQSARRM 131 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 +G + A + + ++ M VGV G+P+V LI + G + Sbjct: 132 GEQIGQLLAFVGQATKSVLMVVARPATLR--MGDVLAYMQQVGVDGLPIVSLIGLLLGMI 189 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A + QL FGA+++ L+++ +RE+G ++TA+++AGRSGS+ AEIG+MK+NEE+ Sbjct: 190 MAFMSSLQLKSFGADVYVATLVAVAMVRELGPIMTAILVAGRSGSSFAAEIGTMKVNEEV 249 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ MG D V L P++ A ++ +PLLT+ + +AI+G IV D+ + + Sbjct: 250 DALTVMGYDPVIFLALPKVIAAVLMVPLLTLFSIAAAIMGGLIVGVAGLDLTPYTYLNES 309 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 S+ ++ T + KA I ++ ++GF V + +GK T+ VV ++ ++I+ D Sbjct: 310 ISSFDAGDLMTSMFKAAVFGLLIAVIGCQKGFTVEGGAAGVGKATTSAVVAALFLIIVTD 369 Query: 362 SLFAIF 367 S+FAI Sbjct: 370 SVFAII 375 >gi|167717852|ref|ZP_02401088.1| ABC transporter, permease protein [Burkholderia pseudomallei DM98] Length = 374 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 101/372 (27%), Positives = 176/372 (47%), Gaps = 12/372 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 G TV R G W + ++ +V I + + DLS + +D +G + + Sbjct: 14 GSQGRTV-RLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALW-- 70 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + G+ G++ Q + R + P+ + G+ + F Sbjct: 71 --RVWGRRLPDGIALTDNQRV-VFERIERLDAGRESPEPVVRIDPVTRF----GQGLFTF 123 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 +LG +I + + +Y G +P+ L++F+ G V Sbjct: 124 GEHLYGGIALLGSLIVDLLAVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIV 181 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 ++ A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+ Sbjct: 182 LSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEEL 241 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+R MG+ + PR+ AL +++PLL + N A+ G ++ I F Sbjct: 242 DAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSL 301 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 S +AN+F GL K I +VA GF + +S SLG+ TT VV SI++VI+ D Sbjct: 302 PSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILAD 361 Query: 362 SLFAIFYFAIGI 373 ++FAI + +G+ Sbjct: 362 AVFAILFQNVGL 373 >gi|289208500|ref|YP_003460566.1| hypothetical protein TK90_1322 [Thioalkalivibrio sp. K90mix] gi|288944131|gb|ADC71830.1| protein of unknown function DUF140 [Thioalkalivibrio sp. K90mix] Length = 382 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 101/370 (27%), Positives = 191/370 (51%), Gaps = 16/370 (4%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQS--DSAIVDLSAITEIDTIGAELIMYF---ME 63 + +G + + + + + + +D+ + D GA L+ +E Sbjct: 24 LQLSGRLDVHAVERVWSPLRRRARELAEGTQAAVTLDVGGLEYCDGAGAALLHALERDIE 83 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + +++L GV +E+ T ++++ +P R + + L + + + Sbjct: 84 RAGRQVELVGVQGLVEE-----QLTPYRELETVEPAR---HETRGGLLAQSFEAVSRVGQ 135 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 + SQ +G + G + + + R G +P+V LI+F+ G ++A Sbjct: 136 AAYSQFGFIGELTRALGSALLNPRQVR--WGDTFRVAEAAGFQALPIVSLIAFLLGVILA 193 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q A + QFG EIF +L+++ RE+G L+ A+++AGRSG+A AEIG+MK+NEE++A Sbjct: 194 FQSAIAMRQFGGEIFVANLVAVSLFRELGPLMMAILLAGRSGAAFAAEIGTMKVNEEVNA 253 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 ++TMGLD VR L+ P++ A I+ PLL + AN ++GA++V+ + IP+ FF++ Sbjct: 254 LKTMGLDPVRFLVLPKVLAGILVAPLLALYANMIGLLGAAVVMQGF-GIPWTAFFNQVTV 312 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +L+++F+GL KA I V G + ++G T+ VV SI ++++ D L Sbjct: 313 ALSLSDLFSGLFKAVIFGLLIAGVGCLRGLQTASGAAAVGISTTSAVVTSIILIVVFDGL 372 Query: 364 FAIFYFAIGI 373 FA+ ++ +G+ Sbjct: 373 FAVLFYHMGV 382 >gi|317153918|ref|YP_004121966.1| hypothetical protein Daes_2214 [Desulfovibrio aespoeensis Aspo-2] gi|316944169|gb|ADU63220.1| protein of unknown function DUF140 [Desulfovibrio aespoeensis Aspo-2] Length = 431 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 93/376 (24%), Positives = 174/376 (46%), Gaps = 14/376 (3%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 ++ G F G +P + + D+ + + + D S I +D G L++ Sbjct: 67 VTGAGQLRFEIRGRLDAPGTAHVWDEASR-VASAGSGGAVEADCSGIEYMDGSGMALLLK 125 Query: 61 FME---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 E + G + L ++ QL L P + + + L +G+ Sbjct: 126 LREVVAEAGGTLSLVNLAPRHRQLIDLTG-------DRPLPGWNPADSERRGLAERVGRA 178 Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + +G + + ++ +VGV + ++ L+ F+ Sbjct: 179 TRDALTGIREMVEFVGEASVIITRSLLHPSRVR--WKDVLLSCVHVGVDSLFIISLLGFL 236 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G +++ Q A L +FG EIF +++ ++ RE+G L+TA+++A RSGSA AEIG+MKI Sbjct: 237 MGLIMSFQSAISLQRFGGEIFVPNMLGLVMFREMGPLVTAILLAARSGSAFAAEIGTMKI 296 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 NEE+DA+ TMGL +R L+ P++ + + +PL+T+ N ++++G ++V+ P F Sbjct: 297 NEELDALTTMGLSPMRFLVVPKLLSALAMVPLMTLFFNLASLVGGALVM-LSLGFPLVTF 355 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 SR S ++ F G+ KA + + V G ++++G T+ VV I + Sbjct: 356 TSRVFSYVHYSDFFGGMAKALVFSILVAGVGCLRGMQTRSGASAVGLSTTSAVVTGIIFI 415 Query: 358 IIIDSLFAIFYFAIGI 373 D LFA+ ++ + I Sbjct: 416 AFADGLFAVAFYYLKI 431 >gi|89902676|ref|YP_525147.1| hypothetical protein Rfer_3917 [Rhodoferax ferrireducens T118] gi|89347413|gb|ABD71616.1| protein of unknown function DUF140 [Rhodoferax ferrireducens T118] Length = 376 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 95/368 (25%), Positives = 182/368 (49%), Gaps = 15/368 (4%) Query: 10 RFAGNWKSPEISEIAD----DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 R +G+W + ++E A+ +A+ + + DL + +D GA+++ + Sbjct: 20 RLSGDWSAARLAEPANWASLQSGLALGAAGAALEVSWDLRDLQRLDHTGAQVLWNAWGRQ 79 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 + L + + S + P S L +G + I+ Sbjct: 80 WPRQLL--IEPAQRAMLSRVEQ-------YALPPPVARRTSAWQLFLALGALVWLLIDHL 130 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 +LG ++ +T + KG + ++ +G + +P+ L+ F+ G V+A Sbjct: 131 RDATRLLGQLLLDTLRLLRAPA--KGPWRDVSGHLFSIGATALPITALLGFLIGVVLAYL 188 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 + QL QFGA+ F ++++ + +RE+G +L A++IAGRSGS I A+IG M++ EE+DA+R Sbjct: 189 MSLQLRQFGADSFIVNILGLSVIRELGPVLAAILIAGRSGSTITAQIGVMRVTEELDAMR 248 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MG+ L+ PR A+ +++PLLT+ + +A++G + + A FF+ Sbjct: 249 VMGIAKGYRLVLPRAIAMALAMPLLTVWTSLAALLGGMLAADLTMGVTPAYFFAALPRAV 308 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 ++N+ + K+ I ++ G V ++ SLG+ T VV SI++VI++D++FA Sbjct: 309 EVSNLTLAMGKSVVFGLLIALIGCHYGLRVKPNTESLGQGTTASVVTSIAMVILVDAVFA 368 Query: 366 IFYFAIGI 373 + + IGI Sbjct: 369 LVFKDIGI 376 >gi|187476645|ref|YP_784668.1| membrane protein [Bordetella avium 197N] gi|115421231|emb|CAJ47736.1| putative membrane protein [Bordetella avium 197N] Length = 377 Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats. Identities = 96/367 (26%), Positives = 171/367 (46%), Gaps = 12/367 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM-EKYH 66 V G+W ++ + DL I +DTIGA L+ E+ Sbjct: 22 VVYLGGDWSLQALAVRGQVQARRDALAQTHAHTRWDLRGIQRLDTIGANLLWRLWGERLP 81 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 +++L + ++F+ ++ + IG+ I ++ Sbjct: 82 ERVRL---TDGQREVFNALAVNPGAVAPAPPVTDRLSW------VRAIGQAIFDAAHNGI 132 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 +LG ++ + +G + Q+Y G + + L+ F+ G V++ Sbjct: 133 MLLRMLGQLVLDFIGLLLRPS--RGPWREISAQIYRTGAQALGITALVGFLIGVVLSYLS 190 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A QL FGA+ F + L+ + +RE+G +L A+++AGRSGSAI A+IG M++ +E+DA+ Sbjct: 191 AQQLQMFGADRFIVRLLGVSIVRELGPVLAAILVAGRSGSAITAQIGVMRVTQELDAMSV 250 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG+ + LI PR+ AL I++PLL + + A++G + I F + T Sbjct: 251 MGISQSQRLILPRVVALAITMPLLVLWTDAMALLGGMLAAQMQLGISAQWFLESLPNAVT 310 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + N + G++K I +VA G + + SLG+ TT VV SI+ VI++D+L+A+ Sbjct: 311 ITNYWIGMVKGVSFGVLIALVACHFGLRIKPDTESLGRGTTTSVVTSITGVILVDALYAV 370 Query: 367 FYFAIGI 373 +GI Sbjct: 371 ILSGMGI 377 >gi|329890329|ref|ZP_08268672.1| hypothetical protein BDIM_20300 [Brevundimonas diminuta ATCC 11568] gi|328845630|gb|EGF95194.1| hypothetical protein BDIM_20300 [Brevundimonas diminuta ATCC 11568] Length = 372 Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats. Identities = 106/373 (28%), Positives = 192/373 (51%), Gaps = 12/373 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S++G T R AG+W + + + D + ++ +DL + DT GA + Sbjct: 11 SQDGQTRLRLAGDWSTVAVGRMGDRLKAELD---GRSVTALDLDDLGRFDTAGALAVAQA 67 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 M + + V +L+ +++ + + P+RS +G+ + F Sbjct: 68 MSRPIPESAWS-VRPEAGRLYRMVAKLD--CMTAEPPRRSA---PMTRGFAKVGRGVYDF 121 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 ++ LG +++ + + + Q G+ +P+V++ +F GAV Sbjct: 122 GAEAMLSLAFLGRLMAAVLTTLKHPGRIR--WAAWFSQAERTGLDAIPIVVVTNFFIGAV 179 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A G L+QFGA +F++ L+ + RE V++TAV++AGRS S+ AEIGSM++ +E+ Sbjct: 180 VAFIGVDLLTQFGAGVFTVQLIGVAVFREFAVVITAVLLAGRSASSFAAEIGSMRMTQEV 239 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA++ MG+D + L+ PR+ AL++ LPLLT LA ++G +V W ++ A FF R Sbjct: 240 DAMKVMGVDPFQALVIPRLAALLVMLPLLTFLAMVGGLLGGVLVAWSQLNLGPAFFFQRL 299 Query: 302 -HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 ++ GLIKAP A + + ++G +V SLG++VT VVQ+I +I++ Sbjct: 300 VEDGYMPTHMMVGLIKAPVFALVVAAIGCRQGMSVAGDVESLGRRVTAAVVQAIFAIILL 359 Query: 361 DSLFAIFYFAIGI 373 D++FA+ + + I Sbjct: 360 DAVFALIFIELKI 372 >gi|254524872|ref|ZP_05136927.1| ABC transporter permease [Stenotrophomonas sp. SKA14] gi|219722463|gb|EED40988.1| ABC transporter permease [Stenotrophomonas sp. SKA14] Length = 370 Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats. Identities = 114/364 (31%), Positives = 192/364 (52%), Gaps = 13/364 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + R +G W A+ + + + +D + I ++D+ G ++ + Sbjct: 18 LIRLSGTWTLKTALAAAE-----VLRGVPEKLTGIDATGIEQMDSAGVLQVLRVAHR--A 70 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + + + +L+ KP+R F +G + ++ + Sbjct: 71 DLGEDALHFRQDH-QALVCTIEEVADDRPKPKRDF---GVLAALERLGVSVHATGHNIKA 126 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 LG + +F+ L + + QM VG+ VP+V L+S++ GAVIA G+ Sbjct: 127 LCSFLGENLVKAARLVKEPRRFR--LTATVHQMEQVGLDAVPLVALLSYLVGAVIAFLGS 184 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L FGAEI+ ++L++I LRE VLLTA+++AGR+ SA A+IG+MK EEIDA+RT+ Sbjct: 185 TILRDFGAEIYVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKAREEIDAMRTL 244 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GLD V +L+ PR+ AL+++LPLLT +A + + G V DIP ++ +R H T + Sbjct: 245 GLDPVDLLVLPRLLALLVTLPLLTFIAMVAGLAGGITVGAFDLDIPPQMYIARMHETMEV 304 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VIIID+ A++ Sbjct: 305 RHMLVGLSKAPVFALVIGLIGCLEGLKVEGTAQSVGERTTSSVVQTISLVIIIDAFAALW 364 Query: 368 YFAI 371 + + Sbjct: 365 FMHM 368 >gi|190572714|ref|YP_001970559.1| putative ABC transporter permease [Stenotrophomonas maltophilia K279a] gi|190010636|emb|CAQ44245.1| putative permease component of ABC transporter protein [Stenotrophomonas maltophilia K279a] Length = 373 Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats. Identities = 113/364 (31%), Positives = 193/364 (53%), Gaps = 13/364 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + R +G W + A +V+ + ++ +D + I ++D+ G ++ + Sbjct: 21 LIRLSGTWTLKT-ALAAAEVLRGVPDTLTG----IDATGIEKMDSAGVLQVLRVAHRADL 75 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + +L+ +P+R F +G + ++ + Sbjct: 76 GEDALQFRPDHQ---ALVCTIEEVADDRPRPKRDF---GVLAALERLGVSVHATGHNIKA 129 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 LG + +F+ L + + QM VG+ VP+V L+S++ GAVIA G+ Sbjct: 130 LCSFLGENLVKAARLVKEPRRFR--LTATVHQMEQVGLDAVPLVALLSYLVGAVIAFLGS 187 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L FGAEI+ ++L++I LRE VLLTA+++AGR+ SA A+IG+MK EEIDA+RT+ Sbjct: 188 TILRDFGAEIYVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKAREEIDAMRTL 247 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GLD + +L+ PR+ AL+++LPLLT +A + + G V DIP ++ +R H T + Sbjct: 248 GLDPIDLLVLPRLLALLVTLPLLTFIAMIAGLAGGITVGAFDLDIPPQMYIARMHETMEV 307 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VIIID+ A++ Sbjct: 308 RHMLVGLSKAPVFALVIGLIGCLEGLKVEGTAQSVGERTTSSVVQTISLVIIIDAFAALW 367 Query: 368 YFAI 371 + + Sbjct: 368 FMHM 371 >gi|53718041|ref|YP_107027.1| hypothetical protein BPSL0401 [Burkholderia pseudomallei K96243] gi|76809874|ref|YP_332026.1| ABC transporter permease [Burkholderia pseudomallei 1710b] gi|126441439|ref|YP_001057484.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 668] gi|126452246|ref|YP_001064733.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|134279780|ref|ZP_01766492.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|167736870|ref|ZP_02409644.1| ABC transporter, permease protein [Burkholderia pseudomallei 14] gi|167813976|ref|ZP_02445656.1| ABC transporter, permease protein [Burkholderia pseudomallei 91] gi|167822497|ref|ZP_02453968.1| ABC transporter, permease protein [Burkholderia pseudomallei 9] gi|167844078|ref|ZP_02469586.1| ABC transporter, permease protein [Burkholderia pseudomallei B7210] gi|167892582|ref|ZP_02479984.1| ABC transporter, permease protein [Burkholderia pseudomallei 7894] gi|167901079|ref|ZP_02488284.1| ABC transporter, permease protein [Burkholderia pseudomallei NCTC 13177] gi|167909299|ref|ZP_02496390.1| ABC transporter, permease protein [Burkholderia pseudomallei 112] gi|167917331|ref|ZP_02504422.1| ABC transporter, permease protein [Burkholderia pseudomallei BCC215] gi|226193717|ref|ZP_03789320.1| putative ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|237810635|ref|YP_002895086.1| putative ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] gi|242316672|ref|ZP_04815688.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|254181998|ref|ZP_04888595.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 1655] gi|254187927|ref|ZP_04894439.1| putative ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|254196514|ref|ZP_04902938.1| putative ABC transporter, permease protein [Burkholderia pseudomallei S13] gi|254260256|ref|ZP_04951310.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 1710a] gi|254295953|ref|ZP_04963410.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 406e] gi|52208455|emb|CAH34389.1| putative membrane protein [Burkholderia pseudomallei K96243] gi|76579327|gb|ABA48802.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710b] gi|126220932|gb|ABN84438.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 668] gi|126225888|gb|ABN89428.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|134248980|gb|EBA49062.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|157805700|gb|EDO82870.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 406e] gi|157935607|gb|EDO91277.1| putative ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|169653257|gb|EDS85950.1| putative ABC transporter, permease protein [Burkholderia pseudomallei S13] gi|184212536|gb|EDU09579.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 1655] gi|225934295|gb|EEH30279.1| putative ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|237504399|gb|ACQ96717.1| putative ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] gi|242139911|gb|EES26313.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|254218945|gb|EET08329.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 1710a] Length = 374 Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats. Identities = 101/372 (27%), Positives = 176/372 (47%), Gaps = 12/372 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 G TV R G W + ++ +V I + + DLS + +D +G + + Sbjct: 14 GSQGRTV-RLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALW-- 70 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + G+ G++ Q + R + P+ + G+ + F Sbjct: 71 --RVWGRRLPDGIALTDNQRV-VFERIERLDAGRESPEPVVRIDPVTRF----GQGLFTF 123 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 +LG +I + + +Y G +P+ L++F+ G V Sbjct: 124 GEHLYGGIALLGGLIVDLLAVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIV 181 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 ++ A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+ Sbjct: 182 LSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEEL 241 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+R MG+ + PR+ AL +++PLL + N A+ G ++ I F Sbjct: 242 DAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSL 301 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 S +AN+F GL K I +VA GF + +S SLG+ TT VV SI++VI+ D Sbjct: 302 PSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILAD 361 Query: 362 SLFAIFYFAIGI 373 ++FAI + +G+ Sbjct: 362 AVFAILFQNVGL 373 >gi|118497851|ref|YP_898901.1| ABC transporter membrane protein [Francisella tularensis subsp. novicida U112] gi|194323824|ref|ZP_03057600.1| conserved hypothetical protein [Francisella tularensis subsp. novicida FTE] gi|254373206|ref|ZP_04988695.1| ABC superfamily ATP binding cassette transporter [Francisella tularensis subsp. novicida GA99-3549] gi|118423757|gb|ABK90147.1| ABC-type transport system permease protein [Francisella novicida U112] gi|151570933|gb|EDN36587.1| ABC superfamily ATP binding cassette transporter [Francisella novicida GA99-3549] gi|194322188|gb|EDX19670.1| conserved hypothetical protein [Francisella tularensis subsp. novicida FTE] Length = 366 Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats. Identities = 106/356 (29%), Positives = 178/356 (50%), Gaps = 6/356 (1%) Query: 17 SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK-LQGVS 75 + +I +V + +D++ I +DT GA I+ ++ + L + Sbjct: 15 LLTLKQINPKLVEKKVSRSKVKLNRIDITKIQALDTAGAYFILKVLKDLELTKEDLVFDN 74 Query: 76 THIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLV 135 + L L++ K+ + +S N Y +GK + + + LG + Sbjct: 75 HKDKNLIELVANNFPTKVDKENSHKS---NIVFTSIYTLGKNTNNLLQEVKASIGFLGAI 131 Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + ++ F ++ Y + + +V+L+S + G V+ + Q+G Sbjct: 132 LLGYLTLIRKP--YRSFFSIVLNIAYDSTIKALSIVMLLSLIIGLVLTYLPLNLMMQYGT 189 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 +IF +D++ I RE L TA++IAGRSGSA +EIG MK+NEEIDA++T+G D ++ L Sbjct: 190 QIFVVDMLGISSFREFAPLFTAIIIAGRSGSAFTSEIGIMKVNEEIDALQTIGEDPIQRL 249 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PRI ALIISLP+LT++A + IIG I+ I F R S + + + GL+ Sbjct: 250 VLPRITALIISLPVLTVIAMIANIIGGIIIADVIAGITPLQFIERLFSNVNVNHFYIGLL 309 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 K PF A I + +G AV S S+GK TT VV SI ++I++D++FA+ + Sbjct: 310 KTPFFALVIAGIGCHQGLAVRRDSQSVGKATTTSVVYSIFLIIVVDAIFAVALNGV 365 >gi|167627644|ref|YP_001678144.1| ABC-type transport system permease [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597645|gb|ABZ87643.1| ABC-type transport system permease protein [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 365 Score = 265 bits (679), Expect = 5e-69, Method: Composition-based stats. Identities = 106/350 (30%), Positives = 177/350 (50%), Gaps = 4/350 (1%) Query: 17 SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVST 76 + +I ++ + D DL+ +T +DT GA +I+ + + + + Sbjct: 15 ILTLKQIDSKLIDKKISRSKDDIKQFDLTKVTLLDTAGAYIIIKTAKNLS--LSKENIIF 72 Query: 77 HIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVI 136 E+ +L+ + + + S N N Y +GK +++ + LG + Sbjct: 73 ANEKDKNLVDIVFKNFPSTAEEELSSKSNVVFNSIYTLGKNTNNLLSEIKTSISFLGAIF 132 Query: 137 SNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE 196 +K F ++ Y + + +VIL+S + G V+ L Q+G + Sbjct: 133 LGYITLIRRP--YKAFFSIVLNICYDSTIRALSIVILLSLIIGLVLTYLPLNLLMQYGTQ 190 Query: 197 IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILI 256 IF +D++ I RE L TA++IAGRSGSA +EIG MK+NEEIDA++T+G D ++ L+ Sbjct: 191 IFVVDMLGISSFREFAPLFTAIIIAGRSGSAFTSEIGIMKVNEEIDALQTIGEDPMQRLV 250 Query: 257 SPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316 PRI AL+ISLP+LT++A + I G I+ I F R S + + + GL+K Sbjct: 251 LPRITALVISLPVLTVIAMIANIAGGIIIADLIAGITPLQFIERLFSNVNVNHFYIGLLK 310 Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 PF A I + +G +V S S+GK TT VV SI ++I++D++FA+ Sbjct: 311 TPFFALVIAGIGCHQGLSVKRDSQSVGKATTTSVVYSIFLIILVDAIFAV 360 >gi|254176752|ref|ZP_04883409.1| putative ABC transporter, permease protein [Burkholderia mallei ATCC 10399] gi|254202028|ref|ZP_04908392.1| putative ABC transporter, permease protein [Burkholderia mallei FMH] gi|254207359|ref|ZP_04913710.1| putative ABC transporter, permease protein [Burkholderia mallei JHU] gi|147747922|gb|EDK54998.1| putative ABC transporter, permease protein [Burkholderia mallei FMH] gi|147752901|gb|EDK59967.1| putative ABC transporter, permease protein [Burkholderia mallei JHU] gi|160697793|gb|EDP87763.1| putative ABC transporter, permease protein [Burkholderia mallei ATCC 10399] Length = 374 Score = 265 bits (679), Expect = 6e-69, Method: Composition-based stats. Identities = 101/372 (27%), Positives = 176/372 (47%), Gaps = 12/372 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 G TV R G W + ++ +V I + + DLS + +D +G + + Sbjct: 14 GSQGRTV-RLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALW-- 70 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + G+ G++ Q + R + P+ + G+ + F Sbjct: 71 --RVWGRRLPDGIALTDNQRV-VFKRIERLDAGRESPEPVVRIDPVTRF----GQGLFTF 123 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 +LG +I + + +Y G +P+ L++F+ G V Sbjct: 124 GEHLYGGIALLGGLIVDLLAVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIV 181 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 ++ A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+ Sbjct: 182 LSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEEL 241 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+R MG+ + PR+ AL +++PLL + N A+ G ++ I F Sbjct: 242 DAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSL 301 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 S +AN+F GL K I +VA GF + +S SLG+ TT VV SI++VI+ D Sbjct: 302 PSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILAD 361 Query: 362 SLFAIFYFAIGI 373 ++FAI + +G+ Sbjct: 362 AVFAILFQNVGL 373 >gi|332184385|gb|AEE26639.1| ABC-type transport system permease protein [Francisella cf. novicida 3523] Length = 366 Score = 265 bits (679), Expect = 6e-69, Method: Composition-based stats. Identities = 113/365 (30%), Positives = 181/365 (49%), Gaps = 9/365 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 FAG + +I +V + +D++ I +DT GA I+ ++ Sbjct: 9 TIYFAG---LLTLKQINPKLVEKKISRTKVKLKQIDITKIQSLDTAGAYFILRVLKDLGL 65 Query: 68 -KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 K L S + L L++ KI + +S N Y +GK + + Sbjct: 66 TKKDLILNSDKDKNLIELVANNFPTKIDKEYSHKS---NIVFTSIYTLGKNTNNLLQEIK 122 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + LG ++ +K F ++ Y + + +V+L+S + G V+ Sbjct: 123 ASIGFLGAILLGYLTLIRKP--YKSFFSIVLNIAYDSTIKALSIVMLLSLIIGLVLTYLP 180 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 + Q+G +IF +D++ I RE L TA++IAGRSGSA +EIG MK+NEEIDA++T Sbjct: 181 LNLMMQYGTQIFVVDMLGISSFREFAPLFTAIIIAGRSGSAFTSEIGIMKVNEEIDALQT 240 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +G D ++ L+ PRI ALIISLP+LT++A + IIG I+ I F R S Sbjct: 241 IGEDPIQRLVLPRITALIISLPVLTVIAMIANIIGGIIIADIIAGITPLQFIERLFSNVN 300 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + + + GL+K PF A I + +G AV S S+GK TT VV SI ++I++D++FA+ Sbjct: 301 VNHFYIGLLKTPFFALVIAGIGCHQGLAVRRDSQSVGKATTTSVVYSIFLIIVVDAIFAV 360 Query: 367 FYFAI 371 + Sbjct: 361 ALNGV 365 >gi|208779915|ref|ZP_03247259.1| conserved hypothetical protein [Francisella novicida FTG] gi|254374661|ref|ZP_04990142.1| hypothetical protein FTDG_00836 [Francisella novicida GA99-3548] gi|151572380|gb|EDN38034.1| hypothetical protein FTDG_00836 [Francisella novicida GA99-3548] gi|208744370|gb|EDZ90670.1| conserved hypothetical protein [Francisella novicida FTG] Length = 366 Score = 265 bits (679), Expect = 6e-69, Method: Composition-based stats. Identities = 105/356 (29%), Positives = 178/356 (50%), Gaps = 6/356 (1%) Query: 17 SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK-LQGVS 75 + +I +V + +D++ I +DT GA I+ ++ + L + Sbjct: 15 LLTLKQINPKLVEKKVSRSKVKLNRIDITKIQALDTAGAYFILKVLKDLELTKEDLVFDN 74 Query: 76 THIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLV 135 + L L++ ++ + +S N Y +GK + + + LG + Sbjct: 75 HKDKNLIELVANNFPTRVDKENSHKS---NIVFTSIYTLGKNTNNLLQEVKASIGFLGAI 131 Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + ++ F ++ Y + + +V+L+S + G V+ + Q+G Sbjct: 132 LLGYLTLIRKP--YRSFFSIVLNIAYDSTIKALSIVMLLSLIIGLVLTYLPLNLMMQYGT 189 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 +IF +D++ I RE L TA++IAGRSGSA +EIG MK+NEEIDA++T+G D ++ L Sbjct: 190 QIFVVDMLGISSFREFAPLFTAIIIAGRSGSAFTSEIGIMKVNEEIDALQTIGEDPIQRL 249 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PRI ALIISLP+LT++A + IIG I+ I F R S + + + GL+ Sbjct: 250 VLPRITALIISLPVLTVIAMIANIIGGIIIADVIAGITPLQFIERLFSNVNVNHFYIGLL 309 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 K PF A I + +G AV S S+GK TT VV SI ++I++D++FA+ + Sbjct: 310 KTPFFALVIAGIGCHQGLAVRRDSQSVGKATTTSVVYSIFLIIVVDAIFAVALNGV 365 >gi|254417869|ref|ZP_05031593.1| conserved hypothetical protein [Brevundimonas sp. BAL3] gi|196184046|gb|EDX79022.1| conserved hypothetical protein [Brevundimonas sp. BAL3] Length = 372 Score = 265 bits (679), Expect = 6e-69, Method: Composition-based stats. Identities = 102/373 (27%), Positives = 190/373 (50%), Gaps = 16/373 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G R G+W + + + + ++ VD + DT GA ++ + Sbjct: 13 DGTAKLRLVGDWTTTALGRLPQRLGKDLD---GRKIESVDTRDLGRFDTAGALALV---Q 66 Query: 64 KYHGKIKLQGVSTHIE--QLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 H + + E +++++I RK K +F + IG+ + F Sbjct: 67 ASHCGVPKSAWTERPEAGRIYTMIEALERKSSPPPK-----QPGAFTSAFAKIGRGVYDF 121 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 ++ LG ++ E + + + + Q G+ +P+V++ +F GAV Sbjct: 122 GAEAMLSLAFLGRLMEAVVEAAKNPGGIR--WPAWVSQAERAGLDAIPIVMVTNFFIGAV 179 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A G L+ FGA++F++ L+ + RE V++ +V++AGRS SA AEIGSM++N+E+ Sbjct: 180 VAFIGVDLLTDFGAQVFAVQLIGVAMFREFAVVIASVLLAGRSASAFAAEIGSMRMNQEV 239 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA++ MG++ + L+ PR+ AL++ LPLLT + ++G IV W ++ A FF R Sbjct: 240 DAMQVMGVNPFQALVVPRLAALVLMLPLLTFMGMIGGLLGGLIVCWSSLNLGPAFFFQRL 299 Query: 302 HSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 ++ ++ GL+KAP A I + ++G +V SLG++VT VVQ+I +I++ Sbjct: 300 VEDGSMAQHMMVGLVKAPVFALVIAAIGCRQGMSVAGDVESLGRRVTAAVVQAIFAIILL 359 Query: 361 DSLFAIFYFAIGI 373 D++FA+ + + I Sbjct: 360 DAVFALMFLELDI 372 >gi|308272474|emb|CBX29078.1| hypothetical protein N47_J00590 [uncultured Desulfobacterium sp.] Length = 381 Score = 265 bits (679), Expect = 7e-69, Method: Composition-based stats. Identities = 107/365 (29%), Positives = 180/365 (49%), Gaps = 6/365 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + G F G + I ++ ++ S+ S DL ++ D G +++ Sbjct: 17 DKEGFFTIHFHGEMDAQSSPGIIGKLLGEVD-SLSLLSITADLDDVSYFDDFGLLVLIEL 75 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + K V+ + + +++ ++ P + N + +G+ ++ Sbjct: 76 QKAAKNKNSSFNVTDNSGKAKNILYLLESNFERSVLPAKQ---NRLQLKITQLGESVLDN 132 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 I++S +G V + + C + + I M GV+ +P++ LISF+ G V Sbjct: 133 ISNSRVFVSFIGSVALSFYQICRHPKSLR--INDTILHMEKTGVNALPIIALISFLLGLV 190 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IA + QL QFGA ++ L+SI + E+G ++TA++IAGRSGSA AEIG+MKI+EE Sbjct: 191 IAFMSSLQLEQFGANLYVASLVSIGMVSELGPIMTAIVIAGRSGSAFAAEIGTMKISEET 250 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ MG D L PRI A II +PLLT+ A+ AI G +V D+ + + ++ Sbjct: 251 DALFVMGFDPTLFLAVPRILASIIVVPLLTLFADIFAIAGGLVVGVFILDLTTSSYLTQT 310 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + L I G+ K+ A I V GF ++++G T+ VV SI ++I+ID Sbjct: 311 MNVLNLFEICWGISKSIVFAVIISWVGCLRGFQTKGGADAVGNAATSAVVSSIFLIILID 370 Query: 362 SLFAI 366 S+FAI Sbjct: 371 SMFAI 375 >gi|139001578|dbj|BAF51698.1| putative innermembrane component of ABC transporter system [Sphingobium japonicum] Length = 316 Score = 265 bits (677), Expect = 1e-68, Method: Composition-based stats. Identities = 103/323 (31%), Positives = 175/323 (54%), Gaps = 9/323 (2%) Query: 50 IDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 +DTIGA ++ +++ + G E+L + + R ++ Sbjct: 1 MDTIGAWVLHRAIKRL--DCGITGDKCDAERLIATVGSVDEPVNI-----RPDHEPPWQR 53 Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ +V G + T +F+ + +++++ VGVS + Sbjct: 54 VVGQIGEAVVNSGTTLLGLLGFFGGTLVATWNVIRHPGRFR--INAVVQRFEVVGVSALG 111 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ L+SF+ G VIAQQG+ QL QFG E+ +I+L+ L RE+GVL+TA+M+AGRSGSA Sbjct: 112 IIGLMSFLIGIVIAQQGSVQLRQFGMEMLTINLVGRLTFRELGVLMTAIMVAGRSGSAFA 171 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A++G+MK+ EE+DA+RT+G+ + L+ PR A+++ +PLL ++ AIIG + Sbjct: 172 AQLGTMKLTEEVDAMRTIGVSPMEALVLPRTLAVVVMMPLLGFYSSIVAIIGGGFLCAVS 231 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 DIP F R + +++ GLIKAP I + +G V ++ +G + T Sbjct: 232 LDIPPITFVQRLREVVPIHDLWVGLIKAPVFGVIIALAGCFQGMQVKANAEEVGLRTTAA 291 Query: 350 VVQSISIVIIIDSLFAIFYFAIG 372 VVQ+I +VI+ID+ FA+F+ +G Sbjct: 292 VVQAIFLVIVIDAFFAVFFTWVG 314 >gi|225165545|ref|ZP_03727365.1| protein of unknown function DUF140 [Opitutaceae bacterium TAV2] gi|224800218|gb|EEG18628.1| protein of unknown function DUF140 [Opitutaceae bacterium TAV2] Length = 371 Score = 265 bits (677), Expect = 1e-68, Method: Composition-based stats. Identities = 92/364 (25%), Positives = 172/364 (47%), Gaps = 19/364 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLS-AITEIDTIGAEL--- 57 + + R G W+ + + + ++L+ + +D+ Sbjct: 23 EDGDLLRIRLGGRWRVTA----PRPSLAGVIGDRKPRRIRIELAPNLERLDSALLLFTHE 78 Query: 58 IMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 I + E++ +S + L + ++ + + + + NL IG+ Sbjct: 79 IRSWCEQHKTDYDTSALSPEVAALCNKLATATQAEPAHDR---------RTNLLTSIGEA 129 Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 ++ ++ + LG + + KF+ +M G +P+V LISF+ Sbjct: 130 TIETVDRATGIMSFLGECLLSFFHLARRPRKFR--WGDCSEEMQQCGAMALPIVGLISFL 187 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G ++A Q A + QFGA+I+ D ++++ RE+G ++T +++AGR+G+A A IG+MK Sbjct: 188 VGVIMAYQSAVLMRQFGADIYVADAVALVMAREMGAMMTGIILAGRTGAAFAATIGNMKA 247 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 NEEIDA+ T G+ V L+ PR+ AL + +PLLT+ AN I+G V DIP + Sbjct: 248 NEEIDALSTFGIRPVDFLVLPRLVALALMMPLLTLYANALGIVGGMGVAMGVLDIPPITY 307 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 +++ + L++I TGLIKA +G+ G ++ +G+ T+ VV + ++ Sbjct: 308 WNQTVNALDLSDISTGLIKASCFGILVGLSGCHRGMNADRSASGVGRAATSAVVIGMLLI 367 Query: 358 IIID 361 II D Sbjct: 368 IIAD 371 >gi|319761111|ref|YP_004125048.1| hypothetical protein Alide_0383 [Alicycliphilus denitrificans BC] gi|317115672|gb|ADU98160.1| protein of unknown function DUF140 [Alicycliphilus denitrificans BC] Length = 388 Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats. Identities = 83/372 (22%), Positives = 170/372 (45%), Gaps = 13/372 (3%) Query: 3 ENGITVFR--FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 ++G R G+W + ++ +A L + +D +GA+++ Sbjct: 27 QDGTATPRALPQGDWVAAAFADRRAWRRLAAQLKACGPGHAWSLQGLARLDHVGAQVLWN 86 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 + +S ++ ++ + +G +++ Sbjct: 87 HWGRAWPA--QVDLSAAQREMLERVARFSTPCAPAPP-------WRLADQIDRLGVLVLR 137 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + ++G ++ + + + + +Y +G + + L+ F+ G Sbjct: 138 ALGHLADMVELVGQLLLDLLRLVRNPA--RAPWRDISGHVYQMGAKALHITALVGFLIGV 195 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A + QL QFGAE F ++++ I +RE+G +L A+++AGRSGSAI A+IG M++ EE Sbjct: 196 VLAYLMSLQLRQFGAEAFIVNILGISLIRELGPMLGAILVAGRSGSAITAQIGVMRVTEE 255 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +DA+R MG+ L+ PR AL +++PL+ + +A+ G + I A F Sbjct: 256 LDAMRVMGIAHGFRLVMPRALALGLAMPLIALWTTLAALAGGMLAADLTMGISSAYFLQA 315 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + ++N++ + K+ I ++ G V ++ SLG+ T VV +I++VI++ Sbjct: 316 LPAAVKVSNLWLAMAKSVVFGVFIALIGCHWGLRVKPNTQSLGEGTTASVVSAITMVIVV 375 Query: 361 DSLFAIFYFAIG 372 D+LFA+ + +G Sbjct: 376 DALFAVAFKNLG 387 >gi|217419400|ref|ZP_03450906.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 576] gi|217396704|gb|EEC36720.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 576] Length = 366 Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats. Identities = 101/372 (27%), Positives = 176/372 (47%), Gaps = 12/372 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 G TV R G W + ++ +V I + + DLS + +D +G + + Sbjct: 6 GSQGRTV-RLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALW-- 62 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + G+ G++ Q + R + P+ + G+ + F Sbjct: 63 --RVWGRRLPDGIALTDNQRV-VFERIERLDAGRESPEPVVRIDPVTRF----GQGLFTF 115 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 +LG +I + + +Y G +P+ L++F+ G V Sbjct: 116 GEHLYGGIALLGGLIVDLLAVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIV 173 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 ++ A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+ Sbjct: 174 LSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEEL 233 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+R MG+ + PR+ AL +++PLL + N A+ G ++ I F Sbjct: 234 DAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSL 293 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 S +AN+F GL K I +VA GF + +S SLG+ TT VV SI++VI+ D Sbjct: 294 PSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILAD 353 Query: 362 SLFAIFYFAIGI 373 ++FAI + +G+ Sbjct: 354 AVFAILFQNVGL 365 >gi|317401487|gb|EFV82119.1| integral membrane protein [Achromobacter xylosoxidans C54] Length = 377 Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats. Identities = 98/368 (26%), Positives = 185/368 (50%), Gaps = 13/368 (3%) Query: 8 VFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-FMEKY 65 V G+W ++E + + A A DL I+ +DTIGA LI + EK Sbjct: 21 VCHVGGDWSVLALAEPGEVERRRAAMAKATDAGARWDLQGISRLDTIGALLIWQAWGEKL 80 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 +++ S + +F+ ++ K +P+ ++ + +G +++ + Sbjct: 81 PERVRW---SAGQQDVFTALATNKGGKQALPRPEPAWGW------LRALGGAVLQAGENG 131 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + +LG ++ + + +G + Q+Y G + + L+ F+ G V++ Sbjct: 132 RALLTMLGQLVLDLFGMLSRPS--RGPWREISAQVYRTGAQALGITALVGFLIGVVLSYL 189 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A QL GA+ F + L+ + +RE+G +L A+++AGRSGSAI A+IG M++ +E+DA+ Sbjct: 190 SAQQLQMIGADRFIVRLLGVSIVRELGPVLAAILVAGRSGSAITAQIGVMRVTQELDAML 249 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MG+ + LI PR+ AL +++PLL + + AI+G + + F Sbjct: 250 VMGISHGQRLILPRVVALAVTMPLLVLWTDAMAILGGMLAAQVQLGVSAQWFLQSLPDAI 309 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 +L N + G++K I ++A G + ++ SLG+ TT VV SI+ VI++D+L+A Sbjct: 310 SLTNYWIGILKGVTFGILIALIACHFGLRIQPNTESLGRGTTTSVVTSITGVILLDALYA 369 Query: 366 IFYFAIGI 373 + + ++GI Sbjct: 370 VIFSSVGI 377 >gi|56708309|ref|YP_170205.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110670780|ref|YP_667337.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis FSC198] gi|134301737|ref|YP_001121705.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis WY96-3418] gi|187931809|ref|YP_001891794.1| ABC-type transport system permease protein [Francisella tularensis subsp. mediasiatica FSC147] gi|224457429|ref|ZP_03665902.1| ABC-type transport system permease protein [Francisella tularensis subsp. tularensis MA00-2987] gi|254370792|ref|ZP_04986797.1| ABC superfamily ATP binding cassette transporter [Francisella tularensis subsp. tularensis FSC033] gi|254875129|ref|ZP_05247839.1| ABC transporter [Francisella tularensis subsp. tularensis MA00-2987] gi|56604801|emb|CAG45880.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110321113|emb|CAL09263.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis FSC198] gi|134049514|gb|ABO46585.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis WY96-3418] gi|151569035|gb|EDN34689.1| ABC superfamily ATP binding cassette transporter [Francisella tularensis subsp. tularensis FSC033] gi|187712718|gb|ACD31015.1| ABC-type transport system permease protein [Francisella tularensis subsp. mediasiatica FSC147] gi|254841128|gb|EET19564.1| ABC transporter [Francisella tularensis subsp. tularensis MA00-2987] gi|282159540|gb|ADA78931.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis NE061598] Length = 366 Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats. Identities = 103/356 (28%), Positives = 176/356 (49%), Gaps = 6/356 (1%) Query: 17 SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK-LQGVS 75 + +I +V + +D++ I +DT GA I+ ++ + L + Sbjct: 15 LLTLKQINPKLVEKKVSRSKVKLNRIDITKIQALDTAGAYFILKVLKDLELTKEDLVFDN 74 Query: 76 THIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLV 135 + L L++ ++ + +S N Y +GK + + + LG + Sbjct: 75 HKDKNLIELVANNFPTRVDKENSHKS---NIVFTSIYTLGKNTNNLLQEIKASIGFLGAI 131 Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + ++ F ++ Y + + +V+L+S + G V+ + Q+G Sbjct: 132 LLGYLTLIRKP--YRSFFSIVLNIAYDSTIKALSIVMLLSLIIGLVLTYLPLNLMMQYGT 189 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 +IF +D++ I RE L TA++IAGRS SA +EIG MK+NEEIDA++T+G D ++ L Sbjct: 190 QIFVVDMLGISSFREFAPLFTAIIIAGRSSSAFTSEIGIMKVNEEIDALQTIGEDPIQRL 249 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PRI ALIISLP+LT++A + II I+ I F R S + + + GL+ Sbjct: 250 VLPRITALIISLPVLTVIAMIANIISGIIIADVIAGITPLQFIERLFSNVNVNHFYIGLL 309 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 K PF A I + +G AV S S+GK TT VV SI ++I++D++FA+ + Sbjct: 310 KTPFFALVIAGIGCHQGLAVRRDSQSVGKATTTSVVYSIFLIIVVDAIFAVALNGV 365 >gi|67642420|ref|ZP_00441177.1| putative ABC transporter, permease protein [Burkholderia mallei GB8 horse 4] gi|121598966|ref|YP_991583.1| putative ABC transporter, permease protein [Burkholderia mallei SAVP1] gi|126450485|ref|YP_001082718.1| putative ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|251768288|ref|ZP_02270158.2| putative ABC transporter, permease protein [Burkholderia mallei PRL-20] gi|254357616|ref|ZP_04973890.1| putative ABC transporter, permease protein [Burkholderia mallei 2002721280] gi|121227776|gb|ABM50294.1| putative ABC transporter, permease protein [Burkholderia mallei SAVP1] gi|126243355|gb|ABO06448.1| putative ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|148026680|gb|EDK84765.1| putative ABC transporter, permease protein [Burkholderia mallei 2002721280] gi|238523569|gb|EEP87007.1| putative ABC transporter, permease protein [Burkholderia mallei GB8 horse 4] gi|243060282|gb|EES42468.1| putative ABC transporter, permease protein [Burkholderia mallei PRL-20] Length = 366 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 101/372 (27%), Positives = 176/372 (47%), Gaps = 12/372 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 G TV R G W + ++ +V I + + DLS + +D +G + + Sbjct: 6 GSQGRTV-RLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALW-- 62 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + G+ G++ Q + R + P+ + G+ + F Sbjct: 63 --RVWGRRLPDGIALTDNQRV-VFKRIERLDAGRESPEPVVRIDPVTRF----GQGLFTF 115 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 +LG +I + + +Y G +P+ L++F+ G V Sbjct: 116 GEHLYGGIALLGGLIVDLLAVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIV 173 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 ++ A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+ Sbjct: 174 LSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEEL 233 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+R MG+ + PR+ AL +++PLL + N A+ G ++ I F Sbjct: 234 DAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSL 293 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 S +AN+F GL K I +VA GF + +S SLG+ TT VV SI++VI+ D Sbjct: 294 PSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILAD 353 Query: 362 SLFAIFYFAIGI 373 ++FAI + +G+ Sbjct: 354 AVFAILFQNVGL 365 >gi|294054794|ref|YP_003548452.1| protein of unknown function DUF140 [Coraliomargarita akajimensis DSM 45221] gi|293614127|gb|ADE54282.1| protein of unknown function DUF140 [Coraliomargarita akajimensis DSM 45221] Length = 366 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 98/374 (26%), Positives = 183/374 (48%), Gaps = 9/374 (2%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIM 59 M + R G+W + ++ A++ S+ AI D + E DT ++ Sbjct: 1 MDSSQGLCVRIYGDWLLGNTRPGSQELESALSVVTTSEQAIRFDAGDLGEWDTG----LL 56 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 F+ + + + +G+ L + +P ++ + +G++ + Sbjct: 57 IFIRRCYDLAQERGLEVDFSGLPEGAQNMMALSLAVPEPAKADGRK--VSWLSRVGERSL 114 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 S G + + F + + L+ Q GV +P+V+L++ +TG Sbjct: 115 AVGGGVRSYCDFFGQFLLDLLAFVTGRGQVRRRDFFLLCQ--ETGVQALPIVMLLNCLTG 172 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 +IA G QL +F A+IF DL+ + RE+G ++T V++AGR+G+A A+IGSM++NE Sbjct: 173 LIIAFIGVIQLQKFAADIFVADLVGLATARELGAVITGVIMAGRTGAAFAAQIGSMQVNE 232 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DA+ T G+ ++ L+ PR+ AL++ +PLL ++A+ I+G I+ D+ +F+ Sbjct: 233 EVDALTTFGISPMQFLVVPRVVALVLMMPLLGVVADIVGILGGLIIAVSISDVSVIQYFN 292 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 + H L + F G+ K IGI G G ++S+G T+ VV SI+ +++ Sbjct: 293 QVHQAVGLNDFFIGIFKCAVFGLIIGIAGCYRGLNCGRDASSVGLATTSAVVTSITWLVV 352 Query: 360 IDSLFAIFYFAIGI 373 D++FA+ +GI Sbjct: 353 ADAIFAVLCHLLGI 366 >gi|32266623|ref|NP_860655.1| hypothetical protein HH1124 [Helicobacter hepaticus ATCC 51449] gi|32262674|gb|AAP77721.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 348 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 95/350 (27%), Positives = 166/350 (47%), Gaps = 4/350 (1%) Query: 24 ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFS 83 I +D +++ D + I + ++ G +T ++F Sbjct: 3 KKQREALSEAIISQHKLTIDFKRVSKADFVFCAFIYGLI--VDKDTQIIGTNTRTNEIFQ 60 Query: 84 LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFC 143 +S + K+ + +F + +GK+I +F + + G+ + Sbjct: 61 TLSSSLPKENEENAINNAFSLKISHMVLIPLGKRIEQFFESFLNFLNFCGMCLWYFFLSL 120 Query: 144 ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203 S +FK S+ M G +PV +L +F+ IA QG QL + G + S++++ Sbjct: 121 LSPRRFK--CGSIFYHMNEAGFKALPVALLTAFIVSYAIALQGVLQLEKMGVPLMSVEIV 178 Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263 + L LRE+G + A++IAGRS SA A++G M + EE DA++TM L LI PR+ AL Sbjct: 179 AKLSLRELGPFILAIVIAGRSSSAFSAQLGVMNLTEENDALKTMNLSLFDYLILPRVLAL 238 Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323 II +PLL LA+ ++ A + + I F + RF+ + + G+IKAPF A Sbjct: 239 IIVMPLLVFLADSVSLFAAMLAVKMQTGINFMQYLERFYEYVGINHFLVGMIKAPFFGAA 298 Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 I +V G V + S+G + T VV ++ VI+I+++F++ + I Sbjct: 299 IALVGCFRGLYVKGDTESIGLETTKSVVNALFWVILINAIFSVITTRLDI 348 >gi|189426230|ref|YP_001953407.1| hypothetical protein Glov_3181 [Geobacter lovleyi SZ] gi|189422489|gb|ACD96887.1| protein of unknown function DUF140 [Geobacter lovleyi SZ] Length = 261 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 68/265 (25%), Positives = 134/265 (50%), Gaps = 7/265 (2%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 N IG++ + + + + L + + + +++Q+ ++G Sbjct: 4 RQMTNFLRAIGRRTIAQVQELGNCGQFL---VYALYSILRRPGRP----VHILKQVSFIG 56 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 + V++L + TG V+ QG + L++FG+E +++ +RE+G +L+A+M+ GR+ Sbjct: 57 AKSLFVIVLTAAFTGMVLGLQGYYTLTKFGSEGMLGTAVALSLIRELGPVLSALMVTGRA 116 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 GSAI AEIG M+I+E+IDA+ TM LD + LISP+ A +IS+PLL + + I G + Sbjct: 117 GSAITAEIGIMRISEQIDALETMALDPYKYLISPKFIAAMISMPLLCAIFDVVGIYGGWM 176 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 V K + +FS + + ++++G +K+ I + +G+ G + + + Sbjct: 177 VGVKLLGVNPGAYFSEMYKSVEWKDVYSGFVKSYSFGIIIAWIGCYKGYYAGHGAEGVSR 236 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYF 369 T VV + ++++ D Sbjct: 237 ATTESVVLTSVLILVWDYFLTSILL 261 >gi|52842264|ref|YP_096063.1| ABC transporter, permease [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629375|gb|AAU28116.1| ABC transporter, permease [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 374 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 112/374 (29%), Positives = 191/374 (51%), Gaps = 13/374 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---M 59 E ++ G+W + + + + S ++ I+ D+ GA + + Sbjct: 11 EQKNATYQCCGSWSVLTLDGLPKKF--STSPLPDSQQITINGEKISAFDSAGALALKKCI 68 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 ++K + +I+L S +Q+ LI + + + Q P S + + Y IGK+ Sbjct: 69 DELKKRNNQIELVNFSDSQQQMLELIE-SKQDILSYQLPAVSK-----EGVLYQIGKESE 122 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 ++ ++G + + E A +F L S++ + G+ +P++ L+SF+ G Sbjct: 123 NKLHQVDGLIILIGDLSTRLFEAFAYWRRF--HLPSIVSVIDSAGLKALPIIGLLSFLIG 180 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A Q QL +GA IF L + RE G L+TA+++AGR+ S+ A+IGSMKINE Sbjct: 181 VVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMKINE 240 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DAI TMGL +L+ P++ L+I PLL A+ +I GA I+ +I F F S Sbjct: 241 EVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFEDFLS 300 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 R + L + GL KAP + I +V +GF V ++S+G + T VVQ++ ++II Sbjct: 301 RLRDSVGLNQMMLGLYKAPAFSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFLIII 360 Query: 360 IDSLFAIFYFAIGI 373 D+ F+I Y +G+ Sbjct: 361 ADAAFSIAYSWMGL 374 >gi|114332197|ref|YP_748419.1| hypothetical protein Neut_2236 [Nitrosomonas eutropha C91] gi|114309211|gb|ABI60454.1| protein of unknown function DUF140 [Nitrosomonas eutropha C91] Length = 381 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 85/372 (22%), Positives = 177/372 (47%), Gaps = 12/372 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +E G + + G++ ++ V + + DL+ I ++D GA ++ Sbjct: 18 TEAGNSCLQLTGSYTLVSLNPSLPAVARELAQLASQPGLYWDLTNIHQLDYAGAVMLWQI 77 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + L + EQ+F + + ++ F S +G+++++F Sbjct: 78 WGEQRPDHLL--LRPEQEQMFQRLEKVV--SLPEPTQRKWFLPVSL------LGQQLLRF 127 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + + G ++ + + + + +Y G + + ++ F+ G V Sbjct: 128 FDHLAGMISLSGQIVLDIVYLMTHPSRIP--VREISANLYRTGAQALGITAIVGFLIGIV 185 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 ++ + QL GA+I+ ++++ + +RE+G +L A+++AGRSGSA+ A++G M++ EE+ Sbjct: 186 LSYLSSEQLHMLGADIYIVNILGMSIIRELGPMLAAILVAGRSGSAMTAQLGVMRVTEEL 245 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ MG+ L+ +I L ++LPL+ + + A++G + + + Sbjct: 246 DALTVMGIPHSLRLVLSKIIGLSLALPLIVLWTSSVALLGGLLAADLQVGLSIRYAVTTL 305 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 +AN++ GL K AI ++A G + ++ SLG+ T VV SI+ VIIID Sbjct: 306 PDAVPIANLWLGLGKGVVCGMAIALIACHFGLRIKPNTESLGEGTTNSVVTSITAVIIID 365 Query: 362 SLFAIFYFAIGI 373 ++FA+ + +IGI Sbjct: 366 AIFAVAFSSIGI 377 >gi|237749352|ref|ZP_04579832.1| ABC transport system permease [Oxalobacter formigenes OXCC13] gi|229380714|gb|EEO30805.1| ABC transport system permease [Oxalobacter formigenes OXCC13] Length = 374 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 90/367 (24%), Positives = 177/367 (48%), Gaps = 15/367 (4%) Query: 9 FRFAGNWKSPEISEIA--DDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-FMEKY 65 G W+ ++ + + I+ + DL+ I E+D I A+ + + EK Sbjct: 19 VVARGCWRVEVLASAGTINRLKSTIHSYSGKTGIVWDLTRIRELDYISAQFLWESWGEKR 78 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 + L + + F+ + + K+ + + + F+N+ + + + Sbjct: 79 PANLAL---TEEQGRFFARLEQAGQLKLPDTTKPFLWPWQRFRNIVHKVSE-------HF 128 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 ++G ++ + F + +G + +Y+ G + + ++ F+ G V++ Sbjct: 129 SGMVALVGQLMIDIVNFAKAPR--RGPWTEISANIYHAGAQALGITAVVGFLIGVVLSYL 186 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A QL FG ++F ++L+ I LRE+G LL A+++AGRSGS++ A++G M++ EE+ A++ Sbjct: 187 SAQQLHMFGGDVFLVNLLGISVLRELGPLLAAILVAGRSGSSMTAQLGVMRVTEELSAMQ 246 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MGL LI P++ AL I +PLL I + A++G + + + F + Sbjct: 247 VMGLPQGFRLIMPKVIALSIVMPLLVIWTDVIALLGGMLAGSYEIGLSMSYFLASLPDAV 306 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 +AN + G+ K I ++A G + ++ SLG+ T VV SI++VI+ D++FA Sbjct: 307 PIANFWIGVGKGYVFGILIALIACYYGLKIKPNTESLGEGTTRSVVTSITVVILADAIFA 366 Query: 366 IFYFAIG 372 I +G Sbjct: 367 IVLQGVG 373 >gi|154149262|ref|YP_001406165.1| ABC transport system permease [Campylobacter hominis ATCC BAA-381] gi|153805271|gb|ABS52278.1| ABC transport system permease [Campylobacter hominis ATCC BAA-381] Length = 367 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 116/371 (31%), Positives = 180/371 (48%), Gaps = 12/371 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQ-SDSAIVDLSAITEIDTIGAELIMYFM 62 NGI F GN+ +IA + + SI+ S+ I++ + D A I + Sbjct: 8 NGILNIFFNGNFDYKLNPKIAHNFKNIVKNSIKNSEKIILNFKDVENFDYFFAVFIKKSL 67 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 K + ++ + I+++F + + ++K N IG + Sbjct: 68 IKAN--YEIINENEKIKKIFKTLENADFSENIHKKN-----INFIIKTLNEIGIATIDAK 120 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + + +G F + K + L + G+ V +V L +F+ G V+ Sbjct: 121 KNLTNLTSFMGEFFIKF--FALTPKKMR--LKEMSNCAKDAGIDAVFIVSLTAFLVGIVL 176 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A G+ L+QFGA I+ ID+M +L LREI L+ A++IAGRS S+ A+IG MKI EEID Sbjct: 177 AYIGSDMLAQFGASIYIIDIMGMLTLREIAPLIAAIVIAGRSASSFTAQIGVMKITEEID 236 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG D L PRI A+II P + LA+ +I IV Y +I FA + RF Sbjct: 237 AMKTMGFDPFYFLCMPRILAMIIITPFVIFLADAVSIFSQMIVCDAYLEISFADYLERFK 296 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 ST + + G++KAPF I IV GF V + S+G+ T VV +I VI +D+ Sbjct: 297 STIEIRHFLVGIVKAPFFGAIIAIVGCLRGFEVKNDTQSIGEYTTISVVNAIFWVIALDA 356 Query: 363 LFAIFYFAIGI 373 FA+ + + I Sbjct: 357 FFAVMFSELKI 367 >gi|296134762|ref|YP_003642004.1| protein of unknown function DUF140 [Thiomonas intermedia K12] gi|295794884|gb|ADG29674.1| protein of unknown function DUF140 [Thiomonas intermedia K12] Length = 380 Score = 263 bits (672), Expect = 4e-68, Method: Composition-based stats. Identities = 104/366 (28%), Positives = 192/366 (52%), Gaps = 20/366 (5%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 V R G W + ++ + + A + +D SA T +DT GA L++ M ++ Sbjct: 27 RRVCRLQGAWNAQGLAREPNTHLPAGTRH-----VTLDASA-TTLDTPGALLLVRSMAQW 80 Query: 66 ---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + + G+S +QL L+ ++ + R L IG+ + + Sbjct: 81 QSAGATVDVSGLSPPQQQLLDLV---RQRALALPPAARR------LGLLGDIGRATLIAL 131 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ++ + +G ++ ++ + +I ++ G+ + ++ L+SF+ G V+ Sbjct: 132 DELRALLAFVGELVWRGAPLLLQPWRVR--WREVIHEIDAAGLRAIGIIGLLSFLIGMVM 189 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A Q L+ +GA I ++L+SI+ LRE+G LLTA+++AGR+GS+ A+IG+M+I EE+D Sbjct: 190 AYQAGATLATYGANILIVNLVSIITLRELGPLLTAILVAGRTGSSYTAQIGTMRITEEVD 249 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R +GL +L+ P++ AL+I+LPLL + A+ + G +V Y +P + + +R Sbjct: 250 ALRALGLSPFEMLVLPKVIALVITLPLLALFADVMGLAGGGVVAAVGYGVPLSEYVARIP 309 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L + GL+KAP A I +V +G V + ++G+ T VVQ+I +VI+ID+ Sbjct: 310 QVVGLKTLVLGLVKAPVFAVVIALVGCMQGLRVAGSAAAVGRATTVSVVQAIFLVIVIDA 369 Query: 363 LFAIFY 368 F++ Y Sbjct: 370 SFSVLY 375 >gi|121592684|ref|YP_984580.1| hypothetical protein Ajs_0250 [Acidovorax sp. JS42] gi|120604764|gb|ABM40504.1| protein of unknown function DUF140 [Acidovorax sp. JS42] Length = 372 Score = 263 bits (672), Expect = 4e-68, Method: Composition-based stats. Identities = 85/371 (22%), Positives = 177/371 (47%), Gaps = 11/371 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + + G+W + ++ +A L + +D +GA+++ Sbjct: 12 DHAARPLAQPQGDWVAAAFADRRAWRRVAAQLKECGPGVAWSLQGVQRLDHVGAQILWNH 71 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + + ++ + ++ ++ + + P R + +G ++ Sbjct: 72 WGRAWP--EQLELTENQREMLERVAQ-YTTPCEPPAPWR------LGDQVDRLGVMVLHA 122 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 ++ ++G ++ + + +G + +Y +G + +P+ L+ F+ G V Sbjct: 123 LDHVRHLVILVGQLVLDVLRLLRNPR--RGPWRDISGHLYRMGATALPITALVGFLIGVV 180 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A + QL QFGAE F ++++ I +RE+G +L A+++AGRSGSAI A+IG M++ EE+ Sbjct: 181 LAYLMSLQLRQFGAEAFIVNILGISLIRELGPMLGAILVAGRSGSAITAQIGVMRVTEEL 240 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+R MG+ L+ PR AL +++PL+ + +A+ G + I A F Sbjct: 241 DAMRVMGIPHGFRLVMPRALALALAMPLVALWTTLAALAGGMLAADLTMGISSAYFAQAL 300 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + ++N++ + K+ I ++ G V ++ SLG+ T VV +I++VII+D Sbjct: 301 PAAVNVSNLWLAMSKSVVFGVFIALIGCHWGLRVKPNTQSLGEGTTASVVSAITMVIIVD 360 Query: 362 SLFAIFYFAIG 372 +LFA+ + +G Sbjct: 361 ALFAVAFKNVG 371 >gi|54297975|ref|YP_124344.1| hypothetical protein lpp2030 [Legionella pneumophila str. Paris] gi|53751760|emb|CAH13182.1| hypothetical protein lpp2030 [Legionella pneumophila str. Paris] Length = 374 Score = 262 bits (671), Expect = 5e-68, Method: Composition-based stats. Identities = 111/374 (29%), Positives = 193/374 (51%), Gaps = 13/374 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---M 59 E ++ G+W + + +I+ S ++ I+ D+ GA + + Sbjct: 11 EQKNATYQCCGSWSVLTLDGLPKKF--SISPLPDSQQITINGEKISVFDSAGALALKKCI 68 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 ++K + +++L S +Q+ LI + ++ + Q P S + + Y IGK+ Sbjct: 69 DELKKRNNQVELVNFSDSQQQMLELIE-SKQEILSYQLPAVSK-----EGVLYQIGKESE 122 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 ++ ++G + + E A +F L S++ + G+ +P++ L+SF+ G Sbjct: 123 NKLHQVDGLIILIGDLSTRLFEAFAYWRRF--HLPSIVSVIDSAGLKALPIIGLLSFLIG 180 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A Q QL +GA IF L + RE G L+TA+++AGR+ S+ A+IGSMKINE Sbjct: 181 VVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMKINE 240 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DAI TMGL +L+ P++ L+I PLL A+ +I GA I+ +I F F + Sbjct: 241 EVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFEDFLT 300 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 R + L + GL KAP + I +V +GF V ++S+G + T VVQ++ ++II Sbjct: 301 RLRDSVGLNQMMLGLYKAPAFSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFLIII 360 Query: 360 IDSLFAIFYFAIGI 373 D+ F+I Y +G+ Sbjct: 361 ADAAFSIAYSWMGL 374 >gi|294338723|emb|CAZ87055.1| putative ABC-type transport system, permease component [Thiomonas sp. 3As] Length = 380 Score = 262 bits (670), Expect = 6e-68, Method: Composition-based stats. Identities = 104/366 (28%), Positives = 191/366 (52%), Gaps = 20/366 (5%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 V R G W + ++ + + A + +D SA T +DT GA L++ M ++ Sbjct: 27 RRVCRLQGAWNAQGLAREPNTHLPAGTRH-----VTLDASA-TTLDTPGALLLVRSMAQW 80 Query: 66 ---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + G+S +QL L+ ++ + R L IG+ + + Sbjct: 81 QSAGATVDASGLSPPQQQLLDLV---RQRALALPPAARR------LGLLGDIGRATLIAL 131 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ++ + +G ++ ++ + +I ++ G+ + ++ L+SF+ G V+ Sbjct: 132 DELRALLAFVGELVWRGAPLLLQPWRVR--WREVIHEIDAAGLRAIGIIGLLSFLIGMVM 189 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A Q L+ +GA I ++L+SI+ LRE+G LLTA+++AGR+GS+ A+IG+M+I EE+D Sbjct: 190 AYQAGATLATYGANILIVNLVSIITLRELGPLLTAILVAGRTGSSYTAQIGTMRITEEVD 249 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R +GL +L+ P++ AL+I+LPLL + A+ + G +V Y +P + + +R Sbjct: 250 ALRALGLSPFEMLVLPKVIALVITLPLLALFADVMGLAGGGVVAAVGYGVPLSEYVARIP 309 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L + GL+KAP A I +V +G V + ++G+ T VVQ+I +VI+ID+ Sbjct: 310 QVVGLKTLVLGLVKAPVFAVVIALVGCMQGLRVAGSAAAVGRATTVSVVQAIFLVIVIDA 369 Query: 363 LFAIFY 368 F++ Y Sbjct: 370 SFSVLY 375 >gi|257459529|ref|ZP_05624638.1| ABC transport system permease [Campylobacter gracilis RM3268] gi|257442954|gb|EEV18088.1| ABC transport system permease [Campylobacter gracilis RM3268] Length = 367 Score = 262 bits (670), Expect = 6e-68, Method: Composition-based stats. Identities = 114/372 (30%), Positives = 174/372 (46%), Gaps = 14/372 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S G G W ++ + + LS I+ +D A +I Sbjct: 10 SSGGKNTLSLRGQW---NYKSSRSQLLALKKAVKNLNELELSLSEISNLDYFMALMIKNA 66 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + ++ L S ++ S + + +R N IG Sbjct: 67 L--AGKRVSLVEDSCKAAKILSFMDDKTIDFSYVPESRR-------LNFLAQIGLYCHLG 117 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 I S A LG S F KF+ + + G+ + +V L +F+ G V Sbjct: 118 ILGLLSLASFLGEFFSKLAAFIIHPMKFR--FKETVNFIKDSGIDALFIVSLTAFLIGIV 175 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A G+ LS+FGA I+ ID+M L LRE+ L+ A++IAGRS S+ A+IG MKI EEI Sbjct: 176 LAYIGSDMLSKFGASIYIIDIMGALTLREVAPLIAAIVIAGRSASSFTAQIGVMKITEEI 235 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+RTMG D L PRI A+++ +PL+ +A+ +I IV Y DI F+ + RF Sbjct: 236 DAMRTMGFDPFYFLAMPRIIAMVLIMPLVIFIADSVSIFAQMIVCDAYLDIAFSDYLDRF 295 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 ++ L + G+IKAPF I I+ GF V ++ S+G+ T VV +I VI ID Sbjct: 296 KASVELRHFLVGMIKAPFFGAFIAIIGCMRGFEVKGNTQSIGEYTTISVVNAIFWVIAID 355 Query: 362 SLFAIFYFAIGI 373 ++FA+ + IG+ Sbjct: 356 AVFAVLFSEIGL 367 >gi|260425314|ref|ZP_05779294.1| ABC transporter, inner membrane subunit [Citreicella sp. SE45] gi|260423254|gb|EEX16504.1| ABC transporter, inner membrane subunit [Citreicella sp. SE45] Length = 366 Score = 262 bits (670), Expect = 7e-68, Method: Composition-based stats. Identities = 116/355 (32%), Positives = 198/355 (55%), Gaps = 7/355 (1%) Query: 22 EIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK---IKLQGVSTHI 78 +A + DLS + +DT GA L+ + I + G S Sbjct: 16 NLASLASTRAILGCEGTIKAFDLSGVGVLDTAGAWLLASCRNAAALRGETIAVIGASPAQ 75 Query: 79 EQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISN 138 L ++ K ++P+ +++ + +G+ + K ++ LGLV++ Sbjct: 76 TLLLETVTDAMADAAKVRQPR--GLHHAMGDGLVGLGEAVSKKVSSIAESLGFLGLVMAQ 133 Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198 G + + L +L+ M+ G++ VP+V+L+ F+ G V++ QGA QL QFGAE++ Sbjct: 134 FGWTVLHPSRLR--LTALVHHMHLAGLNAVPIVVLMGFLIGIVLSFQGASQLKQFGAEVY 191 Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258 +DL++I LRE+G+LLTAV++AGRS SA A IGSMK+ EEIDA+R +GLD + +L+ P Sbjct: 192 VVDLIAISILRELGILLTAVIVAGRSASAFTATIGSMKMREEIDAMRVLGLDPIELLVLP 251 Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318 R+ AL+I LPLL +A+ + ++G +++ W I +F ++ + ++++ GL KAP Sbjct: 252 RVLALVILLPLLGFIADMAGLVGGALMAWIELGISPGMFRTQLLNNTDVSHLLIGLAKAP 311 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 A IG+V +G V + SLG + + VV +I +VI++D++F+IF+ GI Sbjct: 312 VFAVIIGVVGCHQGMQVKGDTESLGNRTSRSVVAAIFLVIVVDAMFSIFFAVWGI 366 >gi|330822969|ref|YP_004386272.1| hypothetical protein Alide2_0328 [Alicycliphilus denitrificans K601] gi|329308341|gb|AEB82756.1| protein of unknown function DUF140 [Alicycliphilus denitrificans K601] Length = 372 Score = 262 bits (669), Expect = 7e-68, Method: Composition-based stats. Identities = 83/372 (22%), Positives = 170/372 (45%), Gaps = 13/372 (3%) Query: 3 ENGITVFR--FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 ++G R G+W + ++ +A L + +D +GA+++ Sbjct: 11 QDGTATPRALPQGDWVAAAFADRRAWRRLAAQLKACGPGHAWSLQGLARLDHVGAQVLWN 70 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 + +S ++ ++ + +G +++ Sbjct: 71 HWGRAWPA--QVDLSAAQREMLERVARFSTPCAPAPP-------WRLADQIDRLGVLVLR 121 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + ++G ++ + + + + +Y +G + + L+ F+ G Sbjct: 122 ALGHLADMVELVGQLLLDLLRLVRNPA--RAPWRDISGHVYQMGAKALHITALVGFLIGV 179 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A + QL QFGAE F ++++ I +RE+G +L A+++AGRSGSAI A+IG M++ EE Sbjct: 180 VLAYLMSLQLRQFGAEAFIVNILGISLIRELGPMLGAILVAGRSGSAITAQIGVMRVTEE 239 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +DA+R MG+ L+ PR AL +++PL+ + +A+ G + I A F Sbjct: 240 LDAMRVMGIAHGFRLVMPRALALGLAMPLIALWTTLAALAGGMLAADLTMGISSAYFLQA 299 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + ++N++ + K+ I ++ G V ++ SLG+ T VV +I++VI++ Sbjct: 300 LPAAVKVSNLWLAMAKSVVFGVFIALIGCHWGLRVKPNTQSLGEGTTASVVSAITMVIVV 359 Query: 361 DSLFAIFYFAIG 372 D+LFA+ + +G Sbjct: 360 DALFAVAFKNLG 371 >gi|254496222|ref|ZP_05109116.1| ABC transporter, permease [Legionella drancourtii LLAP12] gi|254354527|gb|EET13168.1| ABC transporter, permease [Legionella drancourtii LLAP12] Length = 375 Score = 262 bits (669), Expect = 8e-68, Method: Composition-based stats. Identities = 102/373 (27%), Positives = 185/373 (49%), Gaps = 14/373 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-- 60 + + F G W ++ + + + Q V+ I+ +D+ GA ++ Sbjct: 11 DEELAQFNCTGRWSVMDVGSLLKKITASTLPKTQ--KIKVNGEGISHLDSAGALALIKCV 68 Query: 61 -FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 +++ ++ L G S +QL LI + + Q P +N Y +GK+ Sbjct: 69 NALKQRDNEVALVGFSKIQQQLLDLIQE-KQGILDYQIPSP-----PKENFLYKLGKESE 122 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + ++G + + + + +F+ S++ + G+ +P++ L+SF+ G Sbjct: 123 TKLAQVDGLIILIGDLATKLFDAFGNWRRFQ--WPSIMSNIDATGIKALPILALLSFLIG 180 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A Q QL+ +GA F L + RE L+TA+++AGR+ SA A++GSMK+NE Sbjct: 181 VVLAYQMGLQLTTYGANSFIAYLSGMAIFREFAPLITAIIVAGRTSSAYTAQLGSMKVNE 240 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDA+ TMGL +L+ P++ L+I+ PLL A+ +I+G+ I+ I F F Sbjct: 241 EIDALLTMGLSPTELLVLPKVLGLLIAFPLLIFWADIFSILGSMIMANNMLGIGFLDFLQ 300 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN-SLGKKVTTCVVQSISIVI 358 R + ++ GL KAP A I +V +GF V + ++G + T VVQS+ ++I Sbjct: 301 RLRDSVGISQFKLGLYKAPAFALLIALVGCFQGFRVEAGTEKNIGSQTTKSVVQSLFLII 360 Query: 359 IIDSLFAIFYFAI 371 I D++++I Y + Sbjct: 361 IADAIYSIIYSWM 373 >gi|182416429|ref|YP_001821495.1| hypothetical protein Oter_4625 [Opitutus terrae PB90-1] gi|177843643|gb|ACB77895.1| protein of unknown function DUF140 [Opitutus terrae PB90-1] Length = 376 Score = 262 bits (669), Expect = 8e-68, Method: Composition-based stats. Identities = 90/374 (24%), Positives = 174/374 (46%), Gaps = 18/374 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-- 60 + + G+W+ + DVV S + + + A+ D+ + Sbjct: 18 DGNVLEVELGGSWRITDRRPAWMDVV----SSHRPAKLRLHVDAVERWDSSLLLFLFEIG 73 Query: 61 -FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 + + ++ L + ++ +H + + + N +G + Sbjct: 74 EWCRANQVACDTTVLPPRVQTLLTQLASSHATSVPHDRS---------VNFLAVVGNATM 124 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + + G + + KF+ + +M G +P+V LI+F+ G Sbjct: 125 ELSRKTQDFVQFFGECVLGAVKLLKRPDKFR--WRDCLEEMQQCGAMALPIVSLIAFLVG 182 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 +A GA L Q+G +I+ DL+ + +RE+G ++TAV++AGR+G+A A++G+MK NE Sbjct: 183 VTLAYIGALVLRQYGGDIYVADLIGMAMVREMGAVMTAVVLAGRTGAAFAAQLGNMKANE 242 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDA+ T+G+ V+ L+ PR+ AL + +PLL + AN I+G V DI + ++ Sbjct: 243 EIDALETLGISPVQFLVMPRLLALGVMMPLLALYANALGILGGMAVSAGVLDISPSAYWV 302 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 + TL ++ +G IKA +G+ G + +G+ T+ VV SI ++++ Sbjct: 303 EMGTIVTLRDVASGFIKAIAFGGIVGLSGCLRGLQAERSAAGVGRAATSAVVTSILLLVV 362 Query: 360 IDSLFAIFYFAIGI 373 D++FA+ + IG+ Sbjct: 363 ADAIFAVLFNVIGL 376 >gi|161523583|ref|YP_001578595.1| hypothetical protein Bmul_0403 [Burkholderia multivorans ATCC 17616] gi|189351647|ref|YP_001947275.1| putative ABC transporter permease [Burkholderia multivorans ATCC 17616] gi|160341012|gb|ABX14098.1| protein of unknown function DUF140 [Burkholderia multivorans ATCC 17616] gi|189335669|dbj|BAG44739.1| putative ABC transport system permease protein [Burkholderia multivorans ATCC 17616] Length = 374 Score = 262 bits (669), Expect = 8e-68, Method: Composition-based stats. Identities = 101/366 (27%), Positives = 171/366 (46%), Gaps = 11/366 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R G W + ++ VV + DLS I +D +G + + + G Sbjct: 19 TVRLTGQWTALALARNRGAVVRRAESVATGSVSEWDLSGIGRLDHVGGQALW----RVWG 74 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + G++ Q ++ R + + P+R L G + F Sbjct: 75 RKLPPGIALTATQ-RTIFERIERLDSQREAPERIVRVGPVTRL----GLMLFAFAEHLHG 129 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + G VI + +Y G +P+ L++F+ G V++ A Sbjct: 130 GIAMFGRVILDALSVLRRPQTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 187 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M Sbjct: 188 QQLQMFGANRYIVNILGLAVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ LI PR+ AL +++PLL + N A+ G ++ I F + Sbjct: 248 GIPHGLRLILPRVLALGVAMPLLVMWTNIVALTGGALAAKMVLGIDVNYFVRSLPGVVPI 307 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN++ GL K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI Sbjct: 308 ANLYIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAIL 367 Query: 368 YFAIGI 373 + +G+ Sbjct: 368 FQNVGL 373 >gi|53724609|ref|YP_101915.1| ABC transporter permease [Burkholderia mallei ATCC 23344] gi|52428032|gb|AAU48625.1| ABC transporter, permease protein [Burkholderia mallei ATCC 23344] Length = 355 Score = 262 bits (669), Expect = 8e-68, Method: Composition-based stats. Identities = 98/364 (26%), Positives = 173/364 (47%), Gaps = 11/364 (3%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 R G W + ++ +V I + + DLS + +D +G + + + G+ Sbjct: 2 RLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALW----RVWGRR 57 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 G++ Q + R + P+ + G+ + F Sbjct: 58 LPDGIALTDNQRV-VFKRIERLDAGRESPEPVVRIDPVTRF----GQGLFTFGEHLYGGI 112 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 +LG +I + + +Y G +P+ L++F+ G V++ A Q Sbjct: 113 ALLGGLIVDLLAVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIVLSYLSAQQ 170 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R MG+ Sbjct: 171 LQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVMGI 230 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 + PR+ AL +++PLL + N A+ G ++ I F S +AN Sbjct: 231 PHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSLPSVVPIAN 290 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 +F GL K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI + Sbjct: 291 LFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAILFQ 350 Query: 370 AIGI 373 +G+ Sbjct: 351 NVGL 354 >gi|121998618|ref|YP_001003405.1| hypothetical protein Hhal_1839 [Halorhodospira halophila SL1] gi|121590023|gb|ABM62603.1| protein of unknown function DUF140 [Halorhodospira halophila SL1] Length = 376 Score = 262 bits (669), Expect = 9e-68, Method: Composition-based stats. Identities = 109/367 (29%), Positives = 187/367 (50%), Gaps = 12/367 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G+W ++ + ++ VDLSA+ +DT GA L+ + + Sbjct: 18 VRIRGDWTLAHY----RTLLRQVEQTRLGGEPRVDLSALGRLDTAGATLLARLLGAARVE 73 Query: 69 I---KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 +S +L ++ + +P+ ++ L +G ++ + Sbjct: 74 ALARSTPELSAERRKLLQAVAAASERARTAPEPRGDPYF--LGQLTIGLGAQMTHAGHQL 131 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 GLVI+ ++++ L ++ RQ+ + + +P+V L++F GAVIA Sbjct: 132 ARAIGFTGLVIAAFAAGLLRPWRWR--LAAVSRQLQHTALEALPIVALLTFAVGAVIAVL 189 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 G L +FGA IF++DL++ LRE GV+LTA+++AGRS SA A+IGSMK NEE+DA+R Sbjct: 190 GVTVLGRFGAGIFTVDLVAYAFLREFGVVLTAILLAGRSASAFTAQIGSMKANEELDAMR 249 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 G + +L+ PR+ AL+I++PLL+ +A + G +V D+P + +S Sbjct: 250 AQGFSPIEMLVIPRVVALLIAVPLLSFVAVVCGLAGGGLVTLLNVDVPAGRIIA-LYSDI 308 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 ++++ GL KAP A I I+ EG + S+G T+ VVQSI VII++++ A Sbjct: 309 SVSHYLAGLAKAPIFAFVIAIIGCLEGIKCSASAQSVGTHTTSAVVQSIFWVIILNAVAA 368 Query: 366 IFYFAIG 372 + Y +G Sbjct: 369 LIYVELG 375 >gi|89256086|ref|YP_513448.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica LVS] gi|115314562|ref|YP_763285.1| ABC transporter ATP-binding protein [Francisella tularensis subsp. holarctica OSU18] gi|156502103|ref|YP_001428168.1| ABC transporter membrane protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010771|ref|ZP_02275702.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica FSC200] gi|254367414|ref|ZP_04983440.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica 257] gi|290954528|ref|ZP_06559149.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica URFT1] gi|295312044|ref|ZP_06802859.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica URFT1] gi|89143917|emb|CAJ79136.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica LVS] gi|115129461|gb|ABI82648.1| ABC superfamily ATP binding cassette transporter, ABC protein [Francisella tularensis subsp. holarctica OSU18] gi|134253230|gb|EBA52324.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica 257] gi|156252706|gb|ABU61212.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 366 Score = 261 bits (668), Expect = 1e-67, Method: Composition-based stats. Identities = 101/355 (28%), Positives = 171/355 (48%), Gaps = 4/355 (1%) Query: 17 SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVST 76 + +I +V + +D++ I +DT GA I+ ++ ++ + + Sbjct: 15 LLTLKQINPKLVEKKVSRSKVKLNRIDITKIQALDTAGAYFILKVLKDL--ELTKEDLIF 72 Query: 77 HIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVI 136 + +LI + S N Y +GK + + + LG ++ Sbjct: 73 DNHKDKNLIELVANNFPTRVDKENSHKSNIVFTSIYTLGKNTNNLLQEIKASIGFLGAIL 132 Query: 137 SNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE 196 ++ F ++ Y + + +V+L+S + G V+ + Q+ + Sbjct: 133 LGYLTLIRKP--YRSFFSIVLNIAYDSTIKALSIVMLLSLIIGLVLTYLPLNLMMQYSTQ 190 Query: 197 IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILI 256 IF +D++ I RE L TA++IAGRS SA +EIG MK+NEEIDA++T+G D ++ L+ Sbjct: 191 IFVVDMLGISSFREFAPLFTAIIIAGRSSSAFTSEIGIMKVNEEIDALQTIGEDPIQRLV 250 Query: 257 SPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316 PRI ALIISLP+LT++A + II I+ I F R S + + + GL+K Sbjct: 251 LPRITALIISLPVLTVIAMIANIISGIIIADVIAGITPLQFIERLFSNVNVNHFYIGLLK 310 Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 PF A I + +G AV S S+GK T VV SI ++I+ID++FA+ + Sbjct: 311 TPFFALVIAGIGCHQGLAVRRDSQSVGKATTNSVVYSIFLIIVIDAIFAVALNGV 365 >gi|30248137|ref|NP_840207.1| ABC transporter permease [Nitrosomonas europaea ATCC 19718] gi|30180022|emb|CAD84017.1| possible ABC transport permease [Nitrosomonas europaea ATCC 19718] Length = 386 Score = 261 bits (668), Expect = 1e-67, Method: Composition-based stats. Identities = 90/375 (24%), Positives = 183/375 (48%), Gaps = 15/375 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINK---SIQSDSAIVDLSAITEIDTIGAELI 58 + G T+ + G++ + V + K + S DL+ ++++D GA ++ Sbjct: 20 TAAGDTLLQLTGSFTLTSLDRSFPTVTKELAKLASQSDASSLHWDLTDVSQLDYAGAVML 79 Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + G+ + + EQ + + Q + F S +GK++ Sbjct: 80 W----RIWGEQRPAHLLLRPEQERMFLRLEKSVSLPEQPRRILFLPISM------LGKQL 129 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 ++F++ + G ++ + F ++ + + +Y G + + ++ F+ Sbjct: 130 LRFLDHLTGMITLSGQIVLDL--FFLMTHPGRIPAREISANLYRTGAQALGITAVVGFLI 187 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G V++ + QL FGA+I+ ++++ + +RE+G +L A+++AGRSGSA+ A++G M++ Sbjct: 188 GIVLSYLTSEQLHMFGADIYIVNILGMSIIRELGPMLAAILVAGRSGSAMTAQLGVMRVT 247 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE+DA+ MG+ L+ P+I L I+LPL+ + + A++G + + Sbjct: 248 EELDALTVMGIPHSMRLVLPKIIGLGIALPLIVLWTSAIALLGGLVAAELQIGLSIHYAL 307 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + T +AN++ GL K I ++A G + ++ SLG+ T VV SI+ VI Sbjct: 308 TALPDTVPIANLWLGLGKGMVCGMTIALIACHFGLRIKPNTESLGEGTTNSVVTSITAVI 367 Query: 359 IIDSLFAIFYFAIGI 373 +ID++FA+ + IGI Sbjct: 368 LIDAIFAVAFSNIGI 382 >gi|54294946|ref|YP_127361.1| hypothetical protein lpl2025 [Legionella pneumophila str. Lens] gi|53754778|emb|CAH16265.1| hypothetical protein lpl2025 [Legionella pneumophila str. Lens] Length = 374 Score = 261 bits (668), Expect = 1e-67, Method: Composition-based stats. Identities = 112/374 (29%), Positives = 191/374 (51%), Gaps = 13/374 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---M 59 E ++ G+W + + + S ++ I+ D+ GA + + Sbjct: 11 EQKNATYQCCGSWSVLTLEGLPKKFI--TGSLPDSQQITINGEKISAFDSAGALALKKCI 68 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 ++K + +I+L S +Q+ LI + ++ + Q P S + + Y IGK+ Sbjct: 69 DELKKRNNQIELVNFSDSQQQMLELIE-SKQEILSYQLPAVSK-----EGVLYQIGKESE 122 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 ++ ++G + + E A +F L S++ + G+ +P++ L+SF+ G Sbjct: 123 NKLHQVDGLIILIGDLSTRLFEAFAYWRRF--HLPSIVSVIDSAGLKALPIIGLLSFLIG 180 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A Q QL +GA IF L + RE G L+TA+++AGR+ S+ A+IGSMKINE Sbjct: 181 VVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMKINE 240 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DAI TMGL +L+ P++ L+I PLL A+ +I GA I+ +I F F S Sbjct: 241 EVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFEDFLS 300 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 R + L + GL KAP + I +V +GF V ++S+G + T VVQ++ ++II Sbjct: 301 RLRDSVGLNQMMLGLYKAPAFSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFLIII 360 Query: 360 IDSLFAIFYFAIGI 373 D+ F+I Y +G+ Sbjct: 361 ADAAFSIAYSWMGL 374 >gi|329851286|ref|ZP_08266043.1| hypothetical protein ABI_41270 [Asticcacaulis biprosthecum C19] gi|328840132|gb|EGF89704.1| hypothetical protein ABI_41270 [Asticcacaulis biprosthecum C19] Length = 363 Score = 261 bits (668), Expect = 1e-67, Method: Composition-based stats. Identities = 113/365 (30%), Positives = 180/365 (49%), Gaps = 9/365 (2%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R GNW I +++ + A+ VD S I +DT GA L+ + Sbjct: 2 LRPKGNWIVTRIEGLSERLRQALKS---YQQITVDGSQIEALDTAGAYLLRTAVGDRLQG 58 Query: 69 IKLQGVSTHIEQLFSLISFTHRKK---IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 G + +L+ ++ + + + F +GK +F Sbjct: 59 EVFAG-QDNFARLYGIVGNHAAPISNYAQENPEPPKMWLHPFYFGLVKLGKLAERFKTGF 117 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 +QA +G +I+ A + +L+ M G+ +P+V++ SF GAV+ Sbjct: 118 IAQAVFMGHIIAQLMISIAKPGSMR--WAALVNVMQRAGIEAIPIVLMTSFFIGAVLGFI 175 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 G QL+QFG+ IF++D++++ LRE L+TAV++AGRS SA AE+G+MK+N+EIDA+R Sbjct: 176 GVLQLNQFGSGIFAVDMVAMFALREFAPLVTAVLLAGRSASAFAAEVGAMKMNQEIDAMR 235 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MG+D LI PR+ L++ +T L+ + G + IW +VF R Sbjct: 236 VMGIDPYEALILPRLIGLVLMSTFITFLSTLGMMFGGMLAIWSALGAGPSVFLQRVQDYV 295 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 N F G+++ PF A I IV +G V SLG++VTT VVQSI +V ++D+LFA Sbjct: 296 PFYNFFVGIVRPPFFAATIAIVGCWQGMQVKDDVLSLGRQVTTAVVQSIFLVFMLDALFA 355 Query: 366 IFYFA 370 I + Sbjct: 356 ILFNG 360 >gi|121607910|ref|YP_995717.1| hypothetical protein Veis_0920 [Verminephrobacter eiseniae EF01-2] gi|121552550|gb|ABM56699.1| protein of unknown function DUF140 [Verminephrobacter eiseniae EF01-2] Length = 374 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 94/365 (25%), Positives = 175/365 (47%), Gaps = 13/365 (3%) Query: 11 FAGNWKSPEISEIADDVVMA--INKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 G W + E+ A ++ + K + DL A+ +D +GA+L+ ++ Sbjct: 21 LYGRWGAAELGNAAQWQALSGQLRKHPAVPTLGWDLRALQWLDHVGAQLLWNHWQRAWP- 79 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + + + + ++ P R H+G ++ + + Sbjct: 80 -QQLACTDSQRSMLARVAQ-FSTTAPPPAPWR------LAAQVDHLGLLVLHGVEHARHI 131 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +LG ++ + + +G + +Y +G + +P+ L+ F+ G V+A + Sbjct: 132 LEMLGQLVLDLARLARAPR--RGPWRDVSGHLYRMGATALPITALVGFLIGVVLAYLMSL 189 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 QL QFGAE F ++++ I +RE+G +L A+++AGRSGSAI A+IG M++ EE+DA+R MG Sbjct: 190 QLRQFGAESFIVNILGISLIRELGPMLAAILVAGRSGSAITAQIGVMRVTEELDAMRVMG 249 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + L+ PR AL +++PLL++ +A+ G + I A F + Sbjct: 250 IAHGFRLVLPRTLALALAMPLLSLWTTLAALAGGMLAADLTMGISPAYFAQALPAAVRPG 309 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 N+ + K+ I ++ G V + SLG+ T VV +I++VI++D+LFA+ + Sbjct: 310 NLGLAMAKSVVFGAGIALIGCHWGLRVRPDTQSLGEGTTASVVSAITMVIVVDALFAVTF 369 Query: 369 FAIGI 373 IGI Sbjct: 370 KTIGI 374 >gi|307610778|emb|CBX00391.1| hypothetical protein LPW_21111 [Legionella pneumophila 130b] Length = 374 Score = 261 bits (667), Expect = 2e-67, Method: Composition-based stats. Identities = 112/374 (29%), Positives = 190/374 (50%), Gaps = 13/374 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---M 59 E ++ G+W + + + S ++ I+ D+ GA + + Sbjct: 11 EQKNATYQCCGSWSVLTLEGLPKKFI--TGSLPDSQQITINGEKISAFDSAGALALKKCI 68 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 ++K + +I+L S +Q+ LI + + + Q P S + + Y IGK+ Sbjct: 69 DELKKRNNQIELVNFSDSQQQMLELIE-SKQDILSYQLPAVSK-----EGVLYQIGKESE 122 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 ++ ++G + + E A +F L S++ + G+ +P++ L+SF+ G Sbjct: 123 NKLHQVDGLIILIGDLSTRLFEAFAYWRRF--HLPSIVSVIDSAGLKALPIIGLLSFLIG 180 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A Q QL +GA IF L + RE G L+TA+++AGR+ S+ A+IGSMKINE Sbjct: 181 VVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMKINE 240 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DAI TMGL +L+ P++ L+I PLL A+ +I GA I+ +I F F S Sbjct: 241 EVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFEDFLS 300 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 R + L + GL KAP + I +V +GF V ++S+G + T VVQ++ ++II Sbjct: 301 RLRDSVGLNQMMLGLYKAPAFSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFLIII 360 Query: 360 IDSLFAIFYFAIGI 373 D+ F+I Y +G+ Sbjct: 361 ADAAFSIAYSWMGL 374 >gi|222109464|ref|YP_002551728.1| hypothetical protein Dtpsy_0244 [Acidovorax ebreus TPSY] gi|221728908|gb|ACM31728.1| protein of unknown function DUF140 [Acidovorax ebreus TPSY] Length = 372 Score = 260 bits (666), Expect = 2e-67, Method: Composition-based stats. Identities = 85/371 (22%), Positives = 176/371 (47%), Gaps = 11/371 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + + G W + ++ +A L + +D +GA+++ Sbjct: 12 DHAARPLAQPQGEWVAAAFADRRAWRRVAAQLKDCGPGVAWSLQGVQRLDHVGAQILWNH 71 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + + ++ + ++ ++ + + P R + +G ++ Sbjct: 72 WGRAWP--EQLELTENQREMLERVAQ-YTTPCEPPAPWR------LGDQVDRLGVLVLHA 122 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 ++ ++G ++ + + +G + +Y +G + +P+ L+ F+ G V Sbjct: 123 LDHVRHLVILVGQLVLDVLRLLRNPR--RGPWRDISGHLYRMGATALPITALVGFLIGVV 180 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A + QL QFGAE F ++++ I +RE+G +L A+++AGRSGSAI A+IG M++ EE+ Sbjct: 181 LAYLMSLQLRQFGAEAFIVNILGISLIRELGPMLGAILVAGRSGSAITAQIGVMRVTEEL 240 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+R MG+ L+ PR AL +++PL+ + +A+ G + I A F Sbjct: 241 DAMRVMGIPHGFRLVMPRALALALAMPLVALWTTLAALAGGMLAADLTMGISSAYFAQAL 300 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + ++N++ + K+ I ++ G V ++ SLG+ T VV +I++VII+D Sbjct: 301 PAAVNVSNLWLAMSKSVVFGVFIALIGCHWGLRVKPNTQSLGEGTTASVVSAITMVIIVD 360 Query: 362 SLFAIFYFAIG 372 +LFA+ + +G Sbjct: 361 ALFAVAFKNVG 371 >gi|71906845|ref|YP_284432.1| hypothetical protein Daro_1206 [Dechloromonas aromatica RCB] gi|71846466|gb|AAZ45962.1| Protein of unknown function DUF140 [Dechloromonas aromatica RCB] Length = 368 Score = 260 bits (666), Expect = 2e-67, Method: Composition-based stats. Identities = 93/365 (25%), Positives = 169/365 (46%), Gaps = 13/365 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 +G W E+ + + + + DLSA+T +D+ A L+ Sbjct: 14 VVLSGAWTLAEMLPMLSFLQAELTNQ-SHHTRHWDLSAVTRLDSAAAVLLWRTWGGQWP- 71 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 S ++++ + ++ + P++ +L IG + K + + Sbjct: 72 -----ASLDVDEMHRAV-LVRVAELPREMPEQVL---PRVHLPEFIGVLLFKALANVRGM 122 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 + G ++ + +Y G +PV L+ F+ G I+ A Sbjct: 123 VALFGQLLLDCAYLFRHPKDVP--WREFTSNVYKAGALALPVTALVGFLIGVTISYLSAL 180 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 QL FGA++F ++++ I +RE+G +L AV++AGRSGSA+ A+IG M++ EEIDA+ TMG Sbjct: 181 QLKSFGADLFIVNILGISIIRELGPVLVAVLVAGRSGSAMTAQIGVMRVTEEIDALSTMG 240 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + ++ P+++ L +++PLL + + A+ G + D+ F +A Sbjct: 241 ISRSIRVVLPKVFGLTVAMPLLVLWTSAVALFGGMLAALMQLDLSLIYFLENLPRAVPVA 300 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 N+F GL K +VA G V ++ SL T+ VV +I+ VI++D++FAIF Sbjct: 301 NLFIGLGKGLVFGFVTAVVACHFGLHVKPNTESLSANTTSAVVTAITSVILVDAIFAIFT 360 Query: 369 FAIGI 373 IG+ Sbjct: 361 RQIGV 365 >gi|301060039|ref|ZP_07200913.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300445918|gb|EFK09809.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 376 Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats. Identities = 96/376 (25%), Positives = 179/376 (47%), Gaps = 12/376 (3%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAEL--- 57 ++E+ GNW+ + ++ +++ D + + D+ Sbjct: 10 LTESETLTVHLQGNWQMESGVPSSGALLDQLDQHSSIKRIEFDATELGSWDSSLPIFFFE 69 Query: 58 IMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 I + K++ G+ + QL L + +K+ Q R+ F+ H+G + Sbjct: 70 ISKLAVEKKTKVQKDGLPAGVRQLIDLATAVPKKEDARQTVSRAGFFG-------HVGSE 122 Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 ++ F + +G +F+ L + Q G VP+V LISF+ Sbjct: 123 VIDFTKSAGELITFIGAAFEAFVRMITGRARFRATDLGIFLQ--EAGAQAVPIVSLISFL 180 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G ++A G QLS FGA+++ DL+ I +RE+G ++T +++AGR+G+A A++G+M++ Sbjct: 181 VGLILAFVGILQLSMFGAQVYVADLVGIAMVREMGAIMTGIIMAGRTGAAYAAQLGTMQV 240 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 NEEIDA+ T+ + + L+ PR+ AL + +PLL + A+ I+G ++V Y I V+ Sbjct: 241 NEEIDALETLAIPPMEFLVLPRMVALAVMMPLLVLYADLMGILGGALVAVGMYKIDIIVY 300 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 SR S TL+++F GL + + G G ++++G T+ VV I + Sbjct: 301 LSRTKSAVTLSDLFIGLFMGAVFGVLVALSGCLRGIQCGRSASAVGDATTSAVVTGIVAI 360 Query: 358 IIIDSLFAIFYFAIGI 373 II ++ + +GI Sbjct: 361 IIATAVITVLCSILGI 376 >gi|217970678|ref|YP_002355912.1| hypothetical protein Tmz1t_2277 [Thauera sp. MZ1T] gi|217508005|gb|ACK55016.1| protein of unknown function DUF140 [Thauera sp. MZ1T] Length = 371 Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats. Identities = 101/369 (27%), Positives = 174/369 (47%), Gaps = 12/369 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G R AG+W + E + A+ A L A+ +D+ GA L+ + Sbjct: 13 GAEGIRLAGDWTLRGLDECLPTLRRALATV--PPDARWSLRAVRRMDSFGALLLW----Q 66 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 G + Q + + +P R+ ++ L GK + F Sbjct: 67 AWGGRWPAALEADDAQRAIIGRIENASARALPEPPRASALDAVALL----GKGLFAFAGH 122 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +LG ++ + G + LL + ++ VGV +PV L+ F+ G V++ Sbjct: 123 LSGFVALLGRLVLDLGHLLHHPRDWP--LLEISANLHKVGVKAMPVSALVGFLIGVVLSY 180 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 A QL FGA+ F ++++ + +RE+G +L +V++AGRSGSA+ A++G M++ EEIDA+ Sbjct: 181 LSALQLRTFGADAFIVNILGMGIIRELGPVLVSVLVAGRSGSAMTAQLGVMRVTEEIDAL 240 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ L+ P++ AL +++PLL + + A+ G + W I F Sbjct: 241 AAMGVSRSLRLVLPKVVALSLAMPLLVLWTSAIALFGGWVSAWVELGIGLQFFLRALPDA 300 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +AN++ GL K I +VA G V + SL T VV +I++VI++D++F Sbjct: 301 VPVANLYIGLAKGAVFGFLIALVACHFGLRVKPDTESLSANTTASVVAAITVVILVDAVF 360 Query: 365 AIFYFAIGI 373 AI +IG+ Sbjct: 361 AIATRSIGL 369 >gi|148359621|ref|YP_001250828.1| ABC transporter permease [Legionella pneumophila str. Corby] gi|296107663|ref|YP_003619364.1| putative ABC transport system permease protein [Legionella pneumophila 2300/99 Alcoy] gi|148281394|gb|ABQ55482.1| ABC transporter, permease [Legionella pneumophila str. Corby] gi|295649565|gb|ADG25412.1| putative ABC transport system permease protein [Legionella pneumophila 2300/99 Alcoy] Length = 374 Score = 259 bits (663), Expect = 4e-67, Method: Composition-based stats. Identities = 110/374 (29%), Positives = 190/374 (50%), Gaps = 13/374 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---M 59 E ++ G+W + + + S ++ I+ D+ GA + + Sbjct: 11 EQKNATYQCCGSWSVLTLEGLPKKFI--TGPLPDSQQITINGEKISVFDSAGALALKKCI 68 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 ++K + +++L S +Q+ LI + + + Q P S + + Y IGK+ Sbjct: 69 DELKKRNNQVELVNFSDSQQQMLELIE-SKQDILSYQLP-----IVSKEGVLYQIGKESE 122 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 ++ ++G + + E A +F L S++ + G+ +P++ L+SF+ G Sbjct: 123 NKLHQVDGLIILIGDLSTRLFEAFAYWRRF--HLPSIVSVIDSAGLKALPIIGLLSFLIG 180 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A Q QL +GA IF L + RE G L+TA+++AGR+ S+ A+IGSMKINE Sbjct: 181 VVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMKINE 240 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DAI TMGL +L+ P++ L+I PLL A+ +I GA I+ +I F F + Sbjct: 241 EVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFEDFLT 300 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 R + L + GL KAP + I +V +GF V ++S+G + T VVQ++ ++II Sbjct: 301 RLRDSVGLNQMMLGLYKAPAFSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFLIII 360 Query: 360 IDSLFAIFYFAIGI 373 D+ F+I Y +G+ Sbjct: 361 ADAAFSIAYSWMGL 374 >gi|330818440|ref|YP_004362145.1| hypothetical protein bgla_1g35860 [Burkholderia gladioli BSR3] gi|327370833|gb|AEA62189.1| hypothetical protein bgla_1g35860 [Burkholderia gladioli BSR3] Length = 395 Score = 259 bits (663), Expect = 4e-67, Method: Composition-based stats. Identities = 101/387 (26%), Positives = 183/387 (47%), Gaps = 32/387 (8%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDS---------------------AIVDLSA 46 + R +G W + ++ VV ++K + + + DLSA Sbjct: 19 IVRLSGQWTALALARDRGVVVRRVHKLARGPARAGGRMPALGAGSAAAQGGPVSRWDLSA 78 Query: 47 ITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106 I +D +G + + + G +G++ Q ++ R ++P+ ++ Sbjct: 79 IDRLDHVGGQALW----RVWGHRLPEGLTLTDNQ-RTIFERIQRLDEAREEPEPVIRHDP 133 Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 L G +++F + G VI + G + +Y G Sbjct: 134 VTRL----GLALMQFGEHLFGGIAMFGRVILDLGSIARRPKTMP--WTEISANVYNAGAK 187 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +P+ L++F+ G V++ A QL QFGA + ++++ + +RE+G +L A+++AGRSGS Sbjct: 188 ALPITALVAFLIGIVLSYLSAQQLQQFGANRYIVNILGLSVIRELGPVLAAILVAGRSGS 247 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 AI A+IG M++ EE+DA+R MG+ ++ PR+ AL +++PLL + N A+ G ++ Sbjct: 248 AITAQIGVMRVTEELDAMRVMGIPHGLRIVLPRVLALGVAMPLLVMWTNIVALSGGALAA 307 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 I F +AN++ GL K I +V GF + +S SLG+ Sbjct: 308 KLALGIDVNFFIRSLPGVVPIANLWIGLGKGVVFGMLIALVGCHFGFRIKANSQSLGEGT 367 Query: 347 TTCVVQSISIVIIIDSLFAIFYFAIGI 373 TT VV SI++VI+ D++FAI + +G+ Sbjct: 368 TTSVVTSITVVILADAVFAILFQNVGL 394 >gi|323700846|ref|ZP_08112758.1| protein of unknown function DUF140 [Desulfovibrio sp. ND132] gi|323460778|gb|EGB16643.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans ND132] Length = 381 Score = 259 bits (662), Expect = 6e-67, Method: Composition-based stats. Identities = 94/374 (25%), Positives = 175/374 (46%), Gaps = 14/374 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +G V +G + + + + V + S S D +T +D G L++ Sbjct: 19 RDGGLVLALSGRLDAAGTTAVWAEAVKGASGSGFSR-LTADCGGVTYMDGSGVALLLKLK 77 Query: 63 E---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 E + I+L + +L L P++ + L +G Sbjct: 78 ELCAEKKAAIELTNLREEDSRLVDL-------TWDTALPKQRDSERERRGLAEAVGAAGG 130 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + ++ +G S G + ++ VGV + +++LI F+ G Sbjct: 131 ELWHNVREMIAFVGESFSLLGRAAVHPGMVR--WKDVVLACINVGVESMFIIVLIGFLMG 188 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 +++ Q A L +FG EIF +++ ++ RE+G L+T++++A RSGSA AEIG+MKINE Sbjct: 189 LIMSFQSAISLQRFGGEIFVPNMLGLVMFREMGPLVTSILLAARSGSAFAAEIGTMKINE 248 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DA+ TMGL +R L+ P++ A + +PL+T+ N ++++G ++V+ P F S Sbjct: 249 ELDALTTMGLSPMRFLVVPKLLATMAMVPLMTMFFNLASLVGGALVM-LSMGYPLVTFTS 307 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 R + + + + G+ K + + V G ++++G T+ VV I ++ Sbjct: 308 RVFANVSATDFWGGMAKGLVFSFLVAGVGCLRGMQTRSGASAVGLSTTSAVVSGIILIAF 367 Query: 360 IDSLFAIFYFAIGI 373 D LFA+ Y+ +GI Sbjct: 368 ADGLFAVAYYYLGI 381 >gi|311109431|ref|YP_003982284.1| hypothetical protein AXYL_06276 [Achromobacter xylosoxidans A8] gi|310764120|gb|ADP19569.1| hypothetical protein AXYL_06276 [Achromobacter xylosoxidans A8] Length = 354 Score = 259 bits (661), Expect = 7e-67, Method: Composition-based stats. Identities = 97/365 (26%), Positives = 181/365 (49%), Gaps = 13/365 (3%) Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDS-AIVDLSAITEIDTIGAELIMY-FMEKYHGK 68 AG+W ++E + + +D A DL I +DTIGA LI + K + Sbjct: 1 MAGDWSVLALAEPGEVQRRREALACATDGGARWDLHGIGRLDTIGALLIWEAWGHKLPER 60 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 ++ S + +F+ ++ + + + + +G+ I + I++ + Sbjct: 61 VRW---SAGQQDVFNALAMNKGETPAAAPKRDPWSWP------RAVGEAIFQAIDNGRAL 111 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +LG ++ + G G + Q+Y G + + L+ F+ G V++ A Sbjct: 112 LVMLGQLVLDFGGMLRRPRL--GPWREISAQVYRTGAQALGITALVGFLIGVVLSYLSAQ 169 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 QL GA+ F + L+ + +RE+G +L A+++AGRSGSAI A+IG M++ +E+DA+ MG Sbjct: 170 QLQMIGADRFIVRLLGVSIVRELGPVLAAILVAGRSGSAITAQIGVMRVTQELDAMLVMG 229 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + + LI PR+ AL +++PLL + + AI+G + + F +L Sbjct: 230 ISHGQRLILPRVVALAVTMPLLVLWTDAMAILGGMLAAQMQLGVSAQWFLQSLPDAISLT 289 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 N + G++K I ++A G + ++ SLG+ TT VV SI+ VI++D+ +A+ + Sbjct: 290 NYWIGILKGVTFGMLIALIACHFGLRIQPNTESLGRGTTTSVVTSITGVILLDAFYAVIF 349 Query: 369 FAIGI 373 ++GI Sbjct: 350 SSVGI 354 >gi|223936767|ref|ZP_03628677.1| protein of unknown function DUF140 [bacterium Ellin514] gi|223894618|gb|EEF61069.1| protein of unknown function DUF140 [bacterium Ellin514] Length = 384 Score = 258 bits (660), Expect = 9e-67, Method: Composition-based stats. Identities = 96/371 (25%), Positives = 177/371 (47%), Gaps = 6/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E G +G+WKS E+ V ++ + D+S +T + L+M Sbjct: 20 ETGKLQVVASGDWKSGEVFPDVGGVSNKLDVDESIRALSFDVSKVTSWSSGLIGLVMRCR 79 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 E + ++ L + + + + + + + IG ++ Sbjct: 80 ELAMERK----IAFDQSGLPQSVQRLIVLALAVPEKKDARSLQTRPGIFEKIGLGVLGLR 135 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 +G +++ + LI Q G +P+V LI+F+ GA++ Sbjct: 136 RSGEETLKFIGDCTIAFLALAKRKARYRWTEVWLIMQ--QCGPDALPIVALINFLVGAIL 193 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A GA QLS+FGA I+ DL+ I +RE+GV++ AV++ GR+G+A A++G+MK+N+EID Sbjct: 194 AFVGAVQLSKFGAAIYVADLVGIATMREMGVIMMAVIMCGRTGAAFAAQLGTMKVNQEID 253 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A +T+G+ + L+ PRI L + P+L I A+ AI+G +V + FA ++ Sbjct: 254 AYKTLGISPIEFLVMPRIMCLWLMFPVLCIFADLMAIVGGGVVALAMLNFSFAEYWQETV 313 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + TL + F G++K+ + + + G G + ++G T+ VV I++++I D+ Sbjct: 314 AAVTLTHFFIGIVKSFVFGVLVAMTSCLRGIQCGNDAAAVGLATTSAVVTGITVIVIADA 373 Query: 363 LFAIFYFAIGI 373 +FA+ GI Sbjct: 374 IFAVILNVFGI 384 >gi|254450464|ref|ZP_05063901.1| ABC transporter, inner membrane subunit [Octadecabacter antarcticus 238] gi|198264870|gb|EDY89140.1| ABC transporter, inner membrane subunit [Octadecabacter antarcticus 238] Length = 376 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 115/374 (30%), Positives = 186/374 (49%), Gaps = 14/374 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S + G P ++ +V + + LS +T DT A I Sbjct: 13 STDAAVTMTLRGAMTLPYVT----QIVAKFDTLPMDRTVRAYLSGVTRFDTSAAWAIASL 68 Query: 62 ---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 +E ++++G E L ++ IG + Sbjct: 69 RTRLETAGQHLEIRGAGIGHESLLKSVTDAMPVITPAP-----VVAGGLIEWVAAIGSSM 123 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 V + GL +S +F+ L +L+ VG VP+V L++F+ Sbjct: 124 VDAVTFVLELIGYFGLFLSRLLRAIRHPKEFR--LTALVHHCQEVGFKAVPIVALMAFLI 181 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G V+A QG+ QL QFGAE+F +DL+++ LRE+G+LLT++++AGR+ SA A IGSMK+ Sbjct: 182 GVVLAFQGSTQLKQFGAEVFIVDLIAVSILRELGILLTSIIVAGRTASAFTAAIGSMKMR 241 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+R++GLD L PRI AL++ LP+L ++AN + G +I+ W I +F Sbjct: 242 EEIDAMRSLGLDPAATLFVPRILALVLMLPILGLIANVMGLFGGAIMAWIDLGISPEMFM 301 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 +R + ++++ G+IKAP A IG+V G V ++ SLG+ ++ VV +I VI Sbjct: 302 TRLVNGTDVSHLAAGMIKAPVFALIIGVVGCHAGMQVQSNAESLGRMTSSSVVAAIFAVI 361 Query: 359 IIDSLFAIFYFAIG 372 + D++F+IF+ IG Sbjct: 362 MADAVFSIFFAQIG 375 >gi|77920339|ref|YP_358154.1| ABC transporter permease [Pelobacter carbinolicus DSM 2380] gi|77546422|gb|ABA89984.1| ABC-type transport system, permease component [Pelobacter carbinolicus DSM 2380] Length = 386 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 102/375 (27%), Positives = 177/375 (47%), Gaps = 14/375 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++ I FAG + + + ++ + +++ I D G L M Sbjct: 23 NDAEILSLSFAGKLDAAATALLWKPLLE-LAHQTAPRLLLIEADQINYCDGAGIGLFMEL 81 Query: 62 MEKYHGKI---KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + + +L+G+ +L+SL ++ +P L IG++ Sbjct: 82 ARQQQKRQQRFELKGLKEEFARLWSLYRPEDFMDLRGSRPHPCC-------LPEEIGRQA 134 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 A G + S + + L+ M GV+ +P+V LISF+ Sbjct: 135 CLAGQGIVDMARFTGELTSALLHAARHPRSVRWPEVWLV--MEKAGVNSLPIVGLISFLI 192 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G ++A Q + QFG EI+ +L ++ LRE+G L+TA+++AGRS SA AE+G+MKIN Sbjct: 193 GLIMAFQATIPMRQFGVEIYVANLTALSMLRELGPLMTALLLAGRSSSAFAAELGTMKIN 252 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ TMGL + L+ R+ A +I LPLL++ AN +IG ++V+ P + Sbjct: 253 EEIDALTTMGLAPIPFLVVTRVLATVIILPLLSLFANLMGLIGGAVVL-LSLGYPLVTYT 311 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 ++ + L ++ GL+K A + V G ++++G T VV I +++ Sbjct: 312 NQVKAAVNLGDLTGGLVKTLVFALIVAGVGCLYGLKTRSGASAVGDSATRAVVSGIILIV 371 Query: 359 IIDSLFAIFYFAIGI 373 + D LFA+ Y+ +GI Sbjct: 372 VADGLFAVVYYFLGI 386 >gi|242278699|ref|YP_002990828.1| hypothetical protein Desal_1226 [Desulfovibrio salexigens DSM 2638] gi|242121593|gb|ACS79289.1| protein of unknown function DUF140 [Desulfovibrio salexigens DSM 2638] Length = 371 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 96/371 (25%), Positives = 170/371 (45%), Gaps = 14/371 (3%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---M 62 + +G + E+ D A+ + +V+ S I +D GA L M Sbjct: 12 GSTMNISGRLDAEGAGEVWDKARAAVA----AGCLVVECSGIEYLDGGGASLFMMMKAGC 67 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + + G+ L Q ++ + +G+ Sbjct: 68 RDRGSSLVINGLRPEFASFLELFDLDKAAPPSGQVKRK----GGIRGWITSVGQSGQAVA 123 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 D Q G + ++ K K VG G+P+++LI F+ G ++ Sbjct: 124 ADMREQIEFTGNCV--LASLSTATLKNKLRWPDFWLTCEKVGADGLPIILLIGFLMGLIM 181 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + Q A L +FGAEIF +++ ++ RE+G ++TA+++AGR+GSA AEIG+MK+NEE+D Sbjct: 182 SFQSAVSLMRFGAEIFVPNMLGLVMFRELGPMVTAILLAGRTGSAFAAEIGTMKVNEELD 241 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ TMGL+ V L+ PR+ A + PLLT+ NF +++G ++V+ P A + R Sbjct: 242 ALNTMGLNPVSFLVLPRVLATVCMTPLLTLFFNFMSLVGGALVM-LSMGYPLATYCGRVF 300 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + G+IKA + + + + G ++++G T+ VV I ++ + D Sbjct: 301 ENVQWMDFSGGMIKAVVFSFLVAGIGCQRGLVTKSGASAVGDSTTSAVVSGIILIAVFDG 360 Query: 363 LFAIFYFAIGI 373 +FA+ +F GI Sbjct: 361 IFAVIFFLTGI 371 >gi|157165030|ref|YP_001466748.1| MTA/SAH nucleosidase [Campylobacter concisus 13826] gi|112799982|gb|EAT97326.1| ABC transport system permease [Campylobacter concisus 13826] Length = 368 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 108/375 (28%), Positives = 183/375 (48%), Gaps = 20/375 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQS--DSAIVDLSAITEIDTIGAELIM 59 NG +FAG + + + +I K IQ + D S + ID +++ Sbjct: 11 EANGTATIKFAGEFSYKDAKNL-----QSIFKKIQKLKGNVKFDFSELKSIDYA---VLI 62 Query: 60 YFMEKYHGK-IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 +GK ++ I+ + L++ + K P S N +G+KI Sbjct: 63 LLKNTLNGKKFEIITNDEKIKAMSDLLND-EKIDFKYMPPHNS------LNFFSRLGEKI 115 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + + LG + + + + + GV+ V +V L +F+ Sbjct: 116 CEGFVNLLEFGSFLGEFLIKSVRILFNPANLR--FREFSNYIKDGGVNAVFIVSLTAFLI 173 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G V+A G+ L+ FGA IF +++M +L LRE+ L+ A+++AGRS S+ A+IG+MK+ Sbjct: 174 GVVLAYLGSAMLASFGASIFIVEIMGMLTLREVAPLIAAIVVAGRSASSFTAQIGAMKLT 233 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA++TMG + L+ PRI A+++ +P++ +A+ +I+G I+ DI F+ + Sbjct: 234 EEIDAMKTMGFEPFNFLVLPRIIAMVLCVPVIIFIADSISILGQMIICQTILDISFSDYL 293 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 +RF L + G+IKAPF I I+ GF V ++ SLG T VV +I VI Sbjct: 294 NRFREMVELRHFAVGMIKAPFFGAVIAIIGCMRGFGVSQNAQSLGAMTTVSVVNAIFWVI 353 Query: 359 IIDSLFAIFYFAIGI 373 +D+ FAI + + I Sbjct: 354 ALDAFFAIIFMWLKI 368 >gi|224437093|ref|ZP_03658074.1| hypothetical protein HcinC1_03955 [Helicobacter cinaedi CCUG 18818] gi|313143563|ref|ZP_07805756.1| ABC transport system permease [Helicobacter cinaedi CCUG 18818] gi|313128594|gb|EFR46211.1| ABC transport system permease [Helicobacter cinaedi CCUG 18818] Length = 367 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 99/370 (26%), Positives = 176/370 (47%), Gaps = 11/370 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G + +F G + + S ++ +D IT++D + I +E Sbjct: 9 SGRMLIKFQG---ACDYSLDKKSKDFLSKLISANERITLDFLEITKVDFVFCAFIYGLLE 65 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 ++ + ++++F + + K ++ S FY + + GK + Sbjct: 66 --GKDYEILNADSQVKEIFQSMVESLPKLENSKSKSHSMFYGALFDF----GKFCERSYQ 119 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 S + G+ C + FK L S++ + G +PV +L +F+ IA Sbjct: 120 SSLDFLNFFGMCSFYFFRSCWNLRHFK--LGSIMYHINESGFKALPVALLTAFIVSYAIA 177 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 QG QL + G + S+++++ L LRE+G + A++IAGRS S+ A+IG M + EE DA Sbjct: 178 LQGVLQLEKMGVPLMSVEIVAKLSLREMGPFILAIVIAGRSSSSFAAQIGVMNLTEENDA 237 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 ++TM L +I PRI AL+I +PLL LA+ ++ + I + F + RF+ Sbjct: 238 LKTMNLSLFDYIILPRILALVIIMPLLVFLADAVSLFACFLAINMQTGLDFMQYLERFYE 297 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + N + G+IKAPF A+ +V G V + S+G + T VV +I VI+I+++ Sbjct: 298 YVGINNFWVGVIKAPFFGAAVALVGCFRGLYVKGDTESVGIETTKSVVNAIFWVILINAI 357 Query: 364 FAIFYFAIGI 373 F+I + I Sbjct: 358 FSIITTGLNI 367 >gi|325527206|gb|EGD04595.1| putative ABC transporter permease [Burkholderia sp. TJI49] Length = 351 Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats. Identities = 100/361 (27%), Positives = 171/361 (47%), Gaps = 11/361 (3%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72 G W + ++ VV + DLS I +D +G + + + G+ Sbjct: 1 GQWTALALARNRGAVVRRAESVATGRVSEWDLSGIGRLDHVGGQALW----RVWGRKLPA 56 Query: 73 GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHIL 132 G++ Q ++ R + + P+R + L G + F + Sbjct: 57 GIALTATQ-RTIFERIERLDSQREAPERIVRVDPVTRL----GLMLFAFAEHLQGGIAMF 111 Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G VI + +Y G +P+ L++F+ G V++ A QL Sbjct: 112 GRVILDALSVLRRPQTMP--WKETSANIYSAGTQALPITALVAFLIGIVLSYLSAQQLQM 169 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R MG+ Sbjct: 170 FGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVMGIPHG 229 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 LI PR+ AL I++PLL + N A+ G ++ I F +AN++ Sbjct: 230 LRLILPRVLALGIAMPLLVMWTNIIALTGGALAAKLVLGIDVNYFVRSLPGVVPIANLYI 289 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 G+ K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI + +G Sbjct: 290 GIGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAILFQNVG 349 Query: 373 I 373 + Sbjct: 350 L 350 >gi|73539807|ref|YP_294327.1| hypothetical protein Reut_A0101 [Ralstonia eutropha JMP134] gi|72117220|gb|AAZ59483.1| Protein of unknown function DUF140 [Ralstonia eutropha JMP134] Length = 357 Score = 255 bits (653), Expect = 7e-66, Method: Composition-based stats. Identities = 100/367 (27%), Positives = 179/367 (48%), Gaps = 16/367 (4%) Query: 11 FAGNWKSPEIS--EIADDVVMAINKSIQS-DSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 G+W + ++ A + +++ Q+ D A L+ + ++D IG +L+ + + G Sbjct: 3 LCGDWTALGLAGCHQARAMRSRLHELCQTPDDAHWSLAGVDKLDHIGGQLLW---QAWDG 59 Query: 68 KIKLQ-GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 K+ + S ++F I+ H + +R N G ++ F + Sbjct: 60 KLPQRLDASEGQRRVFERIADLHADGWRKHIVERF-------NPITLFGASVLSFCAQAA 112 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + +LG + + F +G + +Y +G + + L+ F+ G V++ Sbjct: 113 NGVSMLGQLTFDLIRFARMPQ--RGPWREISANIYNIGYKALGITALVGFLIGIVLSYLS 170 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A QL FGA F ++++ + +RE+G +L A+++AGRSGSAI A+IG M++ EE+DA+R Sbjct: 171 ANQLRTFGASTFIVNILGMAVIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELDAMRV 230 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG+ LI PR+ AL + +PLL + A+ G I I F Sbjct: 231 MGISHGFRLIMPRVIALAVCMPLLVAWTDVLALAGGIIAARMQLGISPTFFLRALPDAVP 290 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 +AN++ GL K IG+ A G + ++ SLG+ T VV SI+IVI+ D++FA+ Sbjct: 291 VANLWLGLGKGVAFGILIGLAACHFGLRIKPNTQSLGEGTTASVVVSITIVIVADAIFAV 350 Query: 367 FYFAIGI 373 + +G+ Sbjct: 351 MFKDVGL 357 >gi|183220168|ref|YP_001838164.1| ABC transporter permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910288|ref|YP_001961843.1| ABC transporter membrane protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774964|gb|ABZ93265.1| Membrane protein of an ABC transporter complex [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778590|gb|ABZ96888.1| ABC-type transport system, permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 374 Score = 255 bits (652), Expect = 8e-66, Method: Composition-based stats. Identities = 92/337 (27%), Positives = 167/337 (49%), Gaps = 8/337 (2%) Query: 37 SDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96 + I+ + + E DT G + + + + + + + +L + + Sbjct: 46 PRNIIIFANQLKETDTSGISFL----KLIRTECESRNIHFVLRELNDKFQYRLNITNDDS 101 Query: 97 KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156 K S + IGK + + + G + + K + Sbjct: 102 KKYNEQLAVSLRK-SEQIGKLTIDSLLEFKYLITFTGELTVSFWRSFLHPSKIR--WKDS 158 Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 R +GV+ P++ +I F+ G +++ Q A + +FGAEIF +L+ + RE+G L+T Sbjct: 159 FRVAESMGVNAFPIIAMIGFLLGLIMSFQSAIPMRRFGAEIFVANLVGLSLFRELGPLMT 218 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A +++GRSGS+ AE+G+MK++EEIDA+ TMGL V+ LI PR+ A +I PLLTI+ N Sbjct: 219 AFILSGRSGSSFAAELGTMKVSEEIDALTTMGLPPVQFLIIPRLVASLIVTPLLTIVFNL 278 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 +IG ++V+ + P F ++ + L++I GL+K+ F I + G Sbjct: 279 FGLIGGAVVLVSF-GFPLITFVNQVNIAVGLSDILGGLLKSYFFGMIIASIGCYRGLKTA 337 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + ++G+ T+ VV SI +V I+D +F++ +F + I Sbjct: 338 SGAGAVGESTTSAVVGSIILVSILDGIFSVLFFYLRI 374 >gi|237752254|ref|ZP_04582734.1| toluene ABC transporter permease [Helicobacter winghamensis ATCC BAA-430] gi|229376496|gb|EEO26587.1| toluene ABC transporter permease [Helicobacter winghamensis ATCC BAA-430] Length = 373 Score = 254 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 98/358 (27%), Positives = 169/358 (47%), Gaps = 14/358 (3%) Query: 16 KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVS 75 + + D + + K A D +D G E+++ ++E ++ Sbjct: 28 TLNALYTLLDTLKKSPQKVRIQKDASFD------LDFCGGEVLINWLEHLSECCTIENTL 81 Query: 76 THIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND-SCSQAHILGL 134 + + + K +K + K+ I+K LG Sbjct: 82 LEHSKTAEIFAILQSKTTLEKKEFTQDVIQAHKDTLE-----ILKVWGSRLVITLSFLGE 136 Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 ++ + F+ + +L Q+ + VP++ L F+ G VIA QG+ QL QFG Sbjct: 137 IVYLLYHSVLNPRDFR--IRALFFQIQEAVIKAVPIISLACFLIGIVIAYQGSLQLRQFG 194 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 A + +++ ++L LRE+ ++ A+++AGRS SA AEIG M+ +EIDA+R MG + V Sbjct: 195 ASVLIVEMSAMLTLREMAPIIVAIIVAGRSASAFSAEIGMMRATQEIDAMRVMGFNPVTF 254 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 LI PRI+AL+ +LPL+ +A+ ++G ++ I F RF T + + + G+ Sbjct: 255 LIFPRIFALLFALPLVVFVADMFGLLGGMLISQLQLGISSEHFIERFLQTVEMRHFWIGM 314 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 +KAPF IG++ GFA + S+G T VV+SI VI D+L ++ + IG Sbjct: 315 LKAPFFGLIIGLIGCYHGFATQKDTRSIGVHTTKSVVESIFCVIAFDALCSVLFTQIG 372 >gi|254000132|ref|YP_003052195.1| hypothetical protein Msip34_2431 [Methylovorus sp. SIP3-4] gi|313202095|ref|YP_004040753.1| hypothetical protein MPQ_2372 [Methylovorus sp. MP688] gi|253986811|gb|ACT51668.1| protein of unknown function DUF140 [Methylovorus sp. SIP3-4] gi|312441411|gb|ADQ85517.1| conserved hypothetical protein [Methylovorus sp. MP688] Length = 371 Score = 254 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 93/370 (25%), Positives = 168/370 (45%), Gaps = 13/370 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G R G W + ++ A+ DL A ++DT GA ++ + Sbjct: 14 GRRRVRLLGQWSLRALDNDFAELKQALQPFFSDPFTQWDLLATEQLDTAGATIL---LNG 70 Query: 65 YHGKIKLQ-GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + GK+ + V+ LF+ + P R+ + G+ ++KF Sbjct: 71 WEGKLDARMQVTEEQRALFTTLQGLR-------VPARTGSQFDWAFPLVATGELVMKFAQ 123 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 ++GL++ F + +Y GV+ +PV L+ F+ G ++ Sbjct: 124 HLTDFVQLIGLLLLEMLYLVRRPSAFP--WREFMANIYKSGVTALPVTGLLGFMIGVAMS 181 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 + QL FGA+IF ++++ + +RE+G +L A+++AGRSGSA+ A+IG M++ EEIDA Sbjct: 182 YLMSSQLRTFGADIFIVNILGLSMIRELGPILMAILVAGRSGSAMTAQIGVMRVTEEIDA 241 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + TMG+ + ++ P++ L P L + +F + G ++ + F FF Sbjct: 242 LTTMGVSRILRIVLPKVLGLTFVAPFLVLWTSFWGLAGGALSANTELGLSFRFFFDYLPM 301 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 N+ L K + +VA G + ++ SL T+ VV +I+ VI++D+ Sbjct: 302 VVEPVNLTLSLFKGLLFGFVVTLVACHFGLRIMPNTESLSASTTSSVVTAITSVILLDAA 361 Query: 364 FAIFYFAIGI 373 FAI IG+ Sbjct: 362 FAILTSGIGV 371 >gi|297569477|ref|YP_003690821.1| protein of unknown function DUF140 [Desulfurivibrio alkaliphilus AHT2] gi|296925392|gb|ADH86202.1| protein of unknown function DUF140 [Desulfurivibrio alkaliphilus AHT2] Length = 368 Score = 254 bits (650), Expect = 2e-65, Method: Composition-based stats. Identities = 91/364 (25%), Positives = 176/364 (48%), Gaps = 14/364 (3%) Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-YFMEKYHGKI 69 AG+W E++ + + + A L + +D+ GA L+ ++ + + Sbjct: 16 LAGSWTLGELARHLAAIRPQLQATPAG--ASWSLREVERLDSFGAMLLWQHWGRSWPKNL 73 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 ++ + + + + ++ + + + +G + F+ + Sbjct: 74 EI---NDELRGVIAAVAAHSGRPLPRP------HRFTLLEALVLLGSMLFTFLGHARDLV 124 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 +LG ++ + ++ L L MY VGV +PV L+ F+ G V++ A Q Sbjct: 125 TLLGQLLLDLLFLVRHPRQWP--LRELSANMYKVGVKAMPVAALVGFLIGVVLSYLSAMQ 182 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L FG E++ ID++ + +RE+G +L A+++AGRSGSA+ A++G M++ EEIDA+ MG+ Sbjct: 183 LEAFGVEVYLIDILGLGIIRELGPVLVAILVAGRSGSAMTAQLGVMRVTEEIDALAAMGI 242 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 L+ P++ AL + +PLL + + A++G + I FA F + +AN Sbjct: 243 SRTIRLVLPKVLALTLVMPLLVLWTSAVALLGGMLSANMQLGISFAFFMEKLPQVVPIAN 302 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 ++ GL K I +VA G + ++ SL T VV +I+ VI++D++FA+ Sbjct: 303 LYIGLGKGAVFGLLIALVACHFGLRIRPNTESLAAHTTASVVTAITTVILVDAVFAVMLR 362 Query: 370 AIGI 373 +G+ Sbjct: 363 NVGV 366 >gi|218961389|ref|YP_001741164.1| transporter, putative (modular protein) [Candidatus Cloacamonas acidaminovorans] gi|167730046|emb|CAO80958.1| transporter, putative (modular protein) [Candidatus Cloacamonas acidaminovorans] Length = 358 Score = 254 bits (650), Expect = 2e-65, Method: Composition-based stats. Identities = 102/366 (27%), Positives = 176/366 (48%), Gaps = 20/366 (5%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + G+ + + E +V + +DLS I +D+ G + + Sbjct: 9 ILYLEGSLNAETVPETFIEVNSLLKHQ---SPNTIDLSNINVLDSAGVAFLDELNTRLSA 65 Query: 68 K--IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 + + QG + I+++ S KIK P+R IG +V + Sbjct: 66 EGILLFQGATPEIQEVIDSFSSL---KIKVPAPERKM------GFFEKIGDSLVLAGQNF 116 Query: 126 CSQAHILGLVI--SNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 + + V + G F + F + Q +G +P++ L+SF+ G +++ Sbjct: 117 YNVMLLASEVFYWAVIGIFSRKGQRKGSFTI----QCSLLGSQALPILSLLSFIVGFILS 172 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + QL+ FGA +F DLM+ +REI L+TA+++AGRSGSAI +EI +M++ EEIDA Sbjct: 173 LQASVQLANFGANVFIADLMAFAMVREIAPLITAIIVAGRSGSAIASEIATMQVTEEIDA 232 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 ++TM L VR ++ P+ A+ + +P+L + + + IG ++ Y D+ F R + Sbjct: 233 LKTMALSPVRYVVVPKFHAITVVMPILVMFSILVSEIGGGLIAIDYLDLSVYTFVQRSIN 292 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 TL ++ T K+ A I I+ GF V + +GK T+ VV SI VII D++ Sbjct: 293 VLTLKDLVTSFGKSVIFAWTIVIIGAYCGFQVKGGAEGVGKATTSSVVASIFAVIIWDAI 352 Query: 364 FAIFYF 369 F++ Y Sbjct: 353 FSLLYL 358 >gi|298530716|ref|ZP_07018118.1| protein of unknown function DUF140 [Desulfonatronospira thiodismutans ASO3-1] gi|298510090|gb|EFI33994.1| protein of unknown function DUF140 [Desulfonatronospira thiodismutans ASO3-1] Length = 256 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 79/263 (30%), Positives = 140/263 (53%), Gaps = 7/263 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 K++ +G + + F+ + + + ++ + F +QM ++GV+ Sbjct: 1 MKSILGWLGHQTLGFLQELGRIMVLF---LQALSWLVRPPFRIRLFF----KQMEFIGVN 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + VV L S TG V+A Q + S FGAE +++ RE+G ++T +M+ GR+GS Sbjct: 54 SLFVVALTSLFTGMVLALQTFYAFSMFGAETLVGATVALSMTRELGPVITGLMVTGRAGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 AI AEIG+M++ E++DA+ M ++ V+ L+ PRI A +I LPLLTI++N I+G +V Sbjct: 114 AICAEIGTMRVTEQVDALTVMAINPVQYLVLPRIVAGVIMLPLLTIISNTMGILGGYLVG 173 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + DI +F ++ T+A+++ GLIKA + +V +GF + +G+ Sbjct: 174 VQLLDIHGGMFLNKIQEHVTMADVYNGLIKASAFGGILTLVGCYKGFYTRGGAEGVGRST 233 Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369 T VV S ++++ D F Sbjct: 234 TQAVVMSSVLILVSDYFLTALMF 256 >gi|313672871|ref|YP_004050982.1| hypothetical protein Calni_0908 [Calditerrivibrio nitroreducens DSM 19672] gi|312939627|gb|ADR18819.1| protein of unknown function DUF140 [Calditerrivibrio nitroreducens DSM 19672] Length = 256 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 77/248 (31%), Positives = 136/248 (54%), Gaps = 4/248 (1%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 +N + I L+I + +++K LI+QM ++G + + V+IL TG V Sbjct: 13 LNLALESGRIFLLLIDSILWIFRPPFRWKL----LIKQMEFIGANSISVIILTGTFTGMV 68 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 A Q +FGAE ++ + RE+G +L+A+M+A R+GSAI AEIG+MK+ E+I Sbjct: 69 FAFQSYIGFHKFGAEYMVGTVVGLGMARELGPVLSAIMVAARAGSAITAEIGTMKVTEQI 128 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ ++ +D V+ L++PRI A ++ +PLL +A F ++G V K DI ++ Sbjct: 129 DALHSLAVDPVQYLVTPRILAGLLVMPLLNSIAVFCGVLGGYFVGVKILDINRTLYLQYM 188 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + L++++ G+IK+ + +V +G AV + +G+ T VV S ++++ D Sbjct: 189 YQYVDLSDLYNGMIKSVVFGLILTLVGCYKGMAVSGGAEGVGRATTESVVLSCILILVFD 248 Query: 362 SLFAIFYF 369 + F F Sbjct: 249 YILTAFMF 256 >gi|237751540|ref|ZP_04582020.1| ABC transport system permease [Helicobacter bilis ATCC 43879] gi|229372906|gb|EEO23297.1| ABC transport system permease [Helicobacter bilis ATCC 43879] Length = 387 Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats. Identities = 90/271 (33%), Positives = 144/271 (53%), Gaps = 2/271 (0%) Query: 98 PQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLI 157 P R N F + IG+ V F + S + +G+ + C F+ SLI Sbjct: 114 PYRPKRLNIFSSFFSFIGQWCVSFYQTALSFFNFMGMFLHFFMLGCLKPSNFR--FKSLI 171 Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Y G +PV ++ S + G I QGA+QL+ G I S+D + L LRE+G + A Sbjct: 172 YHIYEQGFKALPVGLMTSLIIGYAITLQGAYQLNSMGVPIMSVDTTAKLALREMGPFILA 231 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++IAGRS S+ A++GSM++ EE+ A++ M L+ LI PRI ALII +PL+ A+ Sbjct: 232 LVIAGRSASSFTAQLGSMRLTEELSAMKAMNLNIFYFLIIPRILALIIVMPLMVFAADAI 291 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 A+ G + I +I F + RF+ T ++ + + G++KAP IGIV G Sbjct: 292 ALFGGMVAIKTSINIGFETYLERFYETVSITHFWIGVVKAPVFGAIIGIVGCFRGLECRG 351 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + S+GK T VV +I +I+ +++F+ + Sbjct: 352 DTQSIGKMTTMSVVNAIFWIIMANAIFSFIF 382 >gi|209521691|ref|ZP_03270381.1| protein of unknown function DUF140 [Burkholderia sp. H160] gi|209497882|gb|EDZ98047.1| protein of unknown function DUF140 [Burkholderia sp. H160] Length = 388 Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats. Identities = 97/370 (26%), Positives = 174/370 (47%), Gaps = 16/370 (4%) Query: 8 VFRFAGNWKSPEISEIADD---VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-FME 63 + R +G W + ++ + + + + DLS + +D +G + + + Sbjct: 31 IVRLSGQWTALALARDRETGHVIPLLRALTGAQGIGEWDLSGVDRMDHVGGQALWRVWGR 90 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 K L I + +L+ + + +G I F++ Sbjct: 91 KMPPGTALTDTQRDIFERIALLDTVRESAEPVSR----------IDPFTRLGLGIFSFLD 140 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 +LG V+ + + +Y G +P+ L++F+ G V++ Sbjct: 141 HMQGGVTMLGRVVLDLLAIARKPKL--TPWTEISANIYNAGARALPITALVAFLIGIVLS 198 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 A QL FGA F ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA Sbjct: 199 YLSAQQLRIFGANQFIVNILGLAVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDA 258 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R MG+ LI PR+ AL +++PLL + N ++ G ++ I + F + S Sbjct: 259 MRVMGIPHGLRLILPRVVALAVAMPLLVMWTNVISLTGGALAAKLVLGIEMSFFARQLPS 318 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +AN++ GL K I I GF + +S SLG+ TT VV SI+IVI+ D++ Sbjct: 319 VVPIANLWIGLGKGAVFGMLIAIAGCHFGFRIKANSQSLGEGTTTSVVTSITIVILADAV 378 Query: 364 FAIFYFAIGI 373 FAI + +G+ Sbjct: 379 FAILFQNVGL 388 >gi|205355658|ref|ZP_03222428.1| putative ABC transport system permease protein [Campylobacter jejuni subsp. jejuni CG8421] gi|205346435|gb|EDZ33068.1| putative ABC transport system permease protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 337 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 100/332 (30%), Positives = 164/332 (49%), Gaps = 13/332 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 G W I ++ +A+ IQS I D + IDT G + ++ Sbjct: 11 TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKD 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + KI +G+++ + LF L +++ K +K ++F +GK ++ + Sbjct: 68 KNIKIAKEGLNSRFQTLFELCEKNYQRLSKTKKSHKNFS-----EYFIDLGKLSLELLKI 122 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G ++ + F+ ++ + + +P+VIL + + G V+A Sbjct: 123 LRKFINFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q A+QL+QFGA IF +DLM I RE+ L+ A++IAGRS S+ A+IG MKI +EI A+ Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 TMG +I PR+ AL+I++PL+ +++ +IIG +V DI FA F F Sbjct: 241 NTMGFRSFEFIIIPRVMALVIAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRHFREA 300 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + +IF GL KAP IG++A GF V Sbjct: 301 VDIKHIFIGLAKAPIFGFLIGLIACFRGFEVK 332 >gi|239907930|ref|YP_002954671.1| putative ABC transporter permease protein [Desulfovibrio magneticus RS-1] gi|239797796|dbj|BAH76785.1| putative ABC transporter permease protein [Desulfovibrio magneticus RS-1] Length = 384 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 89/376 (23%), Positives = 176/376 (46%), Gaps = 12/376 (3%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG---AEL 57 ++ G+ F+G+W+ + + V A+ S ++ +T D++ Sbjct: 18 VASGGVVTLTFSGSWRMDQTLPDIEAVRQALAASPAPQKLVLAGEGVTGWDSLFLTQCRA 77 Query: 58 IMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 I+ + + + +E L +L + ++ + +R+ F ++ Y + Sbjct: 78 IIALARERGVAVDAGALPPGVESLLALAAKVPERQGAARAAKRTPFLERMADMGYGAAQG 137 Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + ++ + +++ F S L +Y + + +V LISF+ Sbjct: 138 VRNLLDFTGDVTLAAWALVTGRAVFQRS---------QLTTLIYQASIDALGIVSLISFL 188 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G ++A GA QLSQFGA+I+ ++ I +R +G ++T +++AGR+G+A AE+G+M++ Sbjct: 189 VGLILAFVGAIQLSQFGAQIYVSTIVGIAMVRVMGAIMTGIIMAGRTGAAYAAELGTMQV 248 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 NEEIDA+RT G + L+ PR+ AL++ +PLL I A+ I+G +V I + Sbjct: 249 NEEIDALRTFGFSPTQFLVLPRMIALVLMMPLLCIYADLMGIMGGFVVGVFMLKINPIQY 308 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + + LAN + GL+ + + + G G + +G+ T VV SI + Sbjct: 309 LTHTWQSVPLANFWIGLVHSTVFGVLVAMAGCYRGMRCGRSALGVGQATTAAVVTSILAI 368 Query: 358 IIIDSLFAIFYFAIGI 373 +I ++ + IG+ Sbjct: 369 VIATAILTVCCNIIGV 384 >gi|258404804|ref|YP_003197546.1| hypothetical protein Dret_0676 [Desulfohalobium retbaense DSM 5692] gi|257797031|gb|ACV67968.1| protein of unknown function DUF140 [Desulfohalobium retbaense DSM 5692] Length = 256 Score = 252 bits (645), Expect = 5e-65, Method: Composition-based stats. Identities = 77/263 (29%), Positives = 138/263 (52%), Gaps = 7/263 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 L +G ++ + A +LG S G ++ + F +QM +VGV Sbjct: 1 MLQLFGALGAGTMRGLQQMGQMALLLG---SACGWLLRRPFRIRLFF----KQMEFVGVH 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 VVIL TG V+A Q + F AE +++ RE+G ++TA+M+ GR+GS Sbjct: 54 SGFVVILTGLFTGMVLALQTYYAFRMFSAESLVGATVALSMTRELGPVITALMVTGRAGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG+M++ E++DA+ M ++ V+ L++PR+ A ++ LPLLT++++F I G +V Sbjct: 114 AMAAEIGTMRVTEQVDALEVMAINPVQYLVTPRLLAGMVMLPLLTVISDFVGIAGGYLVG 173 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 K I ++F ++ + L++I+ GL KA + +V +GF + +G+ Sbjct: 174 VKMLGINSSMFMNKIYDLLELSDIYNGLTKAVVFGLILTLVGCYKGFYTSGGAEGVGRST 233 Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369 T VV + ++++ D + F Sbjct: 234 TQAVVLASVLILMSDYILTALMF 256 >gi|307728301|ref|YP_003905525.1| hypothetical protein BC1003_0230 [Burkholderia sp. CCGE1003] gi|307582836|gb|ADN56234.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1003] Length = 389 Score = 252 bits (643), Expect = 9e-65, Method: Composition-based stats. Identities = 97/370 (26%), Positives = 169/370 (45%), Gaps = 16/370 (4%) Query: 8 VFRFAGNWKSPEISEIADD---VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-FME 63 + R +G W + ++ + + DLS I +D +G + + + Sbjct: 31 IVRLSGQWTALALARDRATGHVIPQLRSLEGAEGIGQWDLSRIDRMDHVGGQALWRVWGH 90 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + +L I + +L+ + +G I F Sbjct: 91 RMPPDTELTATQRDIFERIALLDTVRETAEPVVRFDP----------LTRLGLGIFSFFE 140 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 +LG V+ + + +Y G +P+ L++F+ G V++ Sbjct: 141 HLYGGVAMLGRVVLDLLAIARKPAI--TPWTEISANIYNAGTRALPITALVAFLIGIVLS 198 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA Sbjct: 199 YLSAQQLRLFGANQYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDA 258 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R MG+ LI PR+ AL +++PLL + N A+ G ++ I + F Sbjct: 259 MRVMGIPHGLRLILPRVVALGVAMPLLVMWTNIIALTGGAVAAKIVLGIDMSYFARALPG 318 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +AN++ GL K I IV GF + +S SLG+ TT VV SI+IVI+ D++ Sbjct: 319 VVPVANLWIGLGKGVAFGMLIAIVGCHFGFRIKANSQSLGEGTTTSVVTSITIVILADAV 378 Query: 364 FAIFYFAIGI 373 FAI + +G+ Sbjct: 379 FAILFQNVGL 388 >gi|116749843|ref|YP_846530.1| hypothetical protein Sfum_2414 [Syntrophobacter fumaroxidans MPOB] gi|116698907|gb|ABK18095.1| protein of unknown function DUF140 [Syntrophobacter fumaroxidans MPOB] Length = 384 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 88/374 (23%), Positives = 165/374 (44%), Gaps = 12/374 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + + GNW+ + D ++ + D + E D+ ++ + Sbjct: 20 REDVLLVGLRGNWRIADEPIPVDAIIREFESDPRIRILAFDTGELGEWDSSLLTFLIKVI 79 Query: 63 E---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 + + + G+ + +L SL S ++ + F +G + + Sbjct: 80 DTGVRRGLEADRTGLPEGVGRLLSLASAVPEATDARRQEAKQPF-------LTRVGTQAI 132 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 LG + + + L + Q G +P+V LIS + G Sbjct: 133 SLAAAVGQMMEFLGEAAIAFFQLVRGRARLRRVDLMTLIQ--DCGADALPIVSLISVLVG 190 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 ++A GA QL FGA+I+ DL+ + RE+G ++TAV++AGR+G+A A++G+M++NE Sbjct: 191 LILAFVGAVQLRMFGAQIYVADLVGLGMAREMGAMMTAVIMAGRTGAAFAAQLGTMQVNE 250 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDA++T+G+ + L+ PR+ AL++ +P L + A+ I+G IV + ++ Sbjct: 251 EIDALQTLGVSPMEFLVLPRMLALVLMMPFLCLYADLMGILGGGIVGVGMLGLSPLEYYH 310 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 L + GLIK I + G G S ++G T+ VV I +++ Sbjct: 311 ETVQAVGLMDFGAGLIKGAVFGVLIALSGCLRGMQCGRSSAAVGLATTSAVVTGIVAIVV 370 Query: 360 IDSLFAIFYFAIGI 373 D++ + Y +GI Sbjct: 371 SDAILTVIYDRLGI 384 >gi|53802513|ref|YP_112711.1| ABC transporter permease [Methylococcus capsulatus str. Bath] gi|53756274|gb|AAU90565.1| putative ABC transporter, permease protein [Methylococcus capsulatus str. Bath] Length = 406 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 91/371 (24%), Positives = 178/371 (47%), Gaps = 13/371 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E+G V G+W + + D+ + ++ + DL + +D+ GA ++ Sbjct: 48 EDGTAVVH--GHWNLRGLIAASPDLRERLCRAARRPDLEWDLRGVNVLDSAGAFVLW--- 102 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + G+ + ++ EQ R+ P + I I Sbjct: 103 -QAWGERLPERIALRHEQ-----QSAFRRWQTGGIPAVRDGRRPPVPIRRRIIAAIAGLG 156 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + + +LG +I + + ++ G + + L+ F+ G V+ Sbjct: 157 SHLLAVLALLGQLILDLAHLARHPADIP--WREISATIHETGGRALGITALVGFLIGVVV 214 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + + QL FGA+++ ++++ + +RE+G LL A+++AGRSGS++ A IG M++ +E+D Sbjct: 215 SYLSSLQLKTFGAQVYIVNILGMSIIRELGPLLAAILVAGRSGSSMTARIGVMRVTQELD 274 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ MG+ LI P++ AL+++LPLL + + A+ G ++ +I + FF + Sbjct: 275 ALAAMGISQSLRLILPKVVALVVALPLLVVWTDVVALAGGAVSAHLELEIGYHQFFQKLP 334 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 S +AN GL KA + ++A G + ++ SLG + T VV SI++VI++D+ Sbjct: 335 SAVPVANFAIGLGKAAVFGLFVALIACHYGLRIAPNTESLGNETTNSVVVSITLVILVDA 394 Query: 363 LFAIFYFAIGI 373 +FAI + ++GI Sbjct: 395 VFAILFRSVGI 405 >gi|293602529|ref|ZP_06684975.1| ABC superfamily ATP binding cassette transporter, ABC protein [Achromobacter piechaudii ATCC 43553] gi|292819291|gb|EFF78326.1| ABC superfamily ATP binding cassette transporter, ABC protein [Achromobacter piechaudii ATCC 43553] Length = 383 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 98/368 (26%), Positives = 181/368 (49%), Gaps = 13/368 (3%) Query: 8 VFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-FMEKY 65 V AG+W +++ + + A DL I+ +DTIGA LI + EK Sbjct: 27 VCHVAGDWSVLALAQAGEVERRRAAMAQAAEQGMRWDLHGISRLDTIGALLIWQAWGEKL 86 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 +++ S + +F+ ++ + +F + +G I++ + Sbjct: 87 PERVRW---SAGQQDVFNALAMNKGEVQTAPPKPETFGW------VRGLGGAILQAAENG 137 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + +LG ++ + G G + Q+Y G + + L+ F+ G V++ Sbjct: 138 RALLIMLGQLMLDLGGMLRRPRL--GPWREISAQVYRTGAQALGITALVGFLIGVVLSYL 195 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A QL GA+ F + L+ + +RE+G +L A+++AGRSGSAI A+IG M++ +E+DA+ Sbjct: 196 SAQQLQMIGADRFIVRLLGVSIVRELGPVLAAILVAGRSGSAITAQIGVMRVTQELDAML 255 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MG+ + LI PR+ AL +++PLL + + AI+G + + F + Sbjct: 256 VMGISHGQRLILPRVVALAVTMPLLVLWTDAMAILGGMLAAQMQLGVSAQWFLTSLPDAI 315 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 +L N + G+ K I ++A G + ++ SLG+ TT VV SI+ VI++D+L+A Sbjct: 316 SLTNYWIGIFKGVTFGILIALIACHFGLRIQPNTESLGRGTTTSVVTSITGVILLDALYA 375 Query: 366 IFYFAIGI 373 I + ++G+ Sbjct: 376 IIFSSVGV 383 >gi|170691590|ref|ZP_02882755.1| protein of unknown function DUF140 [Burkholderia graminis C4D1M] gi|170143795|gb|EDT11958.1| protein of unknown function DUF140 [Burkholderia graminis C4D1M] Length = 389 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 95/370 (25%), Positives = 168/370 (45%), Gaps = 16/370 (4%) Query: 8 VFRFAGNWKSPEISEIADD---VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-FME 63 + R +G W + ++ + + DLS I +D +G + + + Sbjct: 31 IVRLSGQWTALALARDRATGHVIPQLRSLEGAEGIGQWDLSRIDRMDHVGGQALWRVWGH 90 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + +L I + +L+ + +G I F Sbjct: 91 RMPPDTELTDTQRDIFERIALLDTVRETAEPVIRFDP----------FTRLGLAIFSFFE 140 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 +LG V+ + + +Y G +P+ L++F+ G V++ Sbjct: 141 HLYGGVAMLGRVVLDLLAIARKPAI--TPWTEISANIYNAGTKALPITALVAFLIGIVLS 198 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA Sbjct: 199 YLSAQQLRLFGANQYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDA 258 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R MG+ LI PR+ AL +++PLL + + A+ G ++ I + F Sbjct: 259 MRVMGIPHGLRLILPRVIALGVAMPLLVMWTDIIALTGGAVAAKIVLGIDMSYFARALPG 318 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +AN++ GL K I I GF + +S SLG+ TT VV SI+IVI+ D++ Sbjct: 319 VVPVANLWIGLGKGVAFGMLIAIAGCHFGFRIKANSQSLGEGTTTSVVTSITIVILADAV 378 Query: 364 FAIFYFAIGI 373 FAI + +G+ Sbjct: 379 FAILFQNVGL 388 >gi|296160361|ref|ZP_06843178.1| protein of unknown function DUF140 [Burkholderia sp. Ch1-1] gi|295889342|gb|EFG69143.1| protein of unknown function DUF140 [Burkholderia sp. Ch1-1] Length = 377 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 99/370 (26%), Positives = 171/370 (46%), Gaps = 16/370 (4%) Query: 8 VFRFAGNWKSPEISEIADD---VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-FME 63 + R +G W + ++ + + ++ DLS I +D +G + + + Sbjct: 19 IVRLSGQWTALALARDRATGHVIPLLLSLVGAEGIGGWDLSRIDRMDHVGGQALWRVWGH 78 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 K L I + +L+ K + +G I F Sbjct: 79 KMPADTTLTDTQRDIFERIALLDTVRETAEPVIK----------LDPFTRLGLAIFSFFE 128 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 +LG V+ + + +Y G +P+ L++F+ G V++ Sbjct: 129 HLYGGVAMLGRVVLDLLAIARKPKI--TPWTEISANVYNAGTQALPITALVAFLIGIVLS 186 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA Sbjct: 187 YLSAQQLRLFGANQYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDA 246 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R MG+ LI PR+ AL +++PLL + N A+ G ++ I + F Sbjct: 247 MRVMGIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKIVLGIDMSYFARALPG 306 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +AN++ GL K I IV GF + +S SLG+ TT VV SI+IVI+ D++ Sbjct: 307 VVPVANLWIGLGKGVVFGMLIAIVGCHFGFRIKANSQSLGEGTTTSVVTSITIVILADAV 366 Query: 364 FAIFYFAIGI 373 FAI + +G+ Sbjct: 367 FAILFQNVGL 376 >gi|327399071|ref|YP_004339940.1| hypothetical protein Hipma_0911 [Hippea maritima DSM 10411] gi|327181700|gb|AEA33881.1| protein of unknown function DUF140 [Hippea maritima DSM 10411] Length = 349 Score = 250 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 105/347 (30%), Positives = 182/347 (52%), Gaps = 18/347 (5%) Query: 27 VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLIS 86 + I K + AI+D+ +++DT + K ++ + + L +++ Sbjct: 21 LSKLITKINECKPAIIDVRGASKLDTSSLVYLASLNIKLL-------LNKNDQSLLNIVL 73 Query: 87 FTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASS 146 +K K + + Y +G V+ + + LG V F + Sbjct: 74 QHIPEKKKKKDSR---------GFLYSLGYAFVERLKELYVFMSFLGEVFVGFIGFILNP 124 Query: 147 YKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206 +F+ L S ++ + +G + +P++ ISF+ GAVIA G+ +L QFGA IF +DL+SI Sbjct: 125 KRFR--LKSTLKDVELMGFNAIPILTTISFLIGAVIAYHGSVRLKQFGANIFVVDLVSIS 182 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 LRE+G L+ A+++AGRS S+ A+IG MK+ EE+D I+TMG++ IL+ P+I ++++ Sbjct: 183 VLRELGPLIVAILLAGRSSSSYTAQIGIMKVTEEVDVIKTMGVNPYDILVFPKIVSMLVC 242 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326 +PLL +LA+ ++G +V +I F R H + +G++KAP A I Sbjct: 243 VPLLIVLADVMGVLGGMVVAHLSLNITVRDFILRLHQAIGIKTFVSGILKAPAFAFLIAT 302 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + +GF + S+GK VT VV SI VII D++F++ + +GI Sbjct: 303 IGAFKGFQTKKNVESIGKSVTVSVVDSIFGVIIADAIFSVLFRWMGI 349 >gi|148263112|ref|YP_001229818.1| hypothetical protein Gura_1039 [Geobacter uraniireducens Rf4] gi|146396612|gb|ABQ25245.1| protein of unknown function DUF140 [Geobacter uraniireducens Rf4] Length = 256 Score = 250 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 72/252 (28%), Positives = 131/252 (51%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + K + + S +G +++ + G + +++Q+ ++G V+ L + Sbjct: 5 VEKLGSLTLSILQEMGRMVNFIIYAFYLIIRSPGKPVHILKQIRFIGAKSFFVIFLTASF 64 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG V+ QG + L++FG+E +++ +RE+G +LTA+M+ GR+GSAI AEIG M+I Sbjct: 65 TGMVLGLQGYYTLAKFGSEGMLGSAVALSLIRELGPVLTALMVTGRAGSAISAEIGIMRI 124 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+ TM L+ + L+SP++ A IISLPLL + + I G +V K + + Sbjct: 125 TEQIDALETMALEPCKYLVSPKLLAAIISLPLLCAIFDVVGIYGGYLVGVKLLGVNPGAY 184 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 F + ++++G+IK+ I + +G+ G + + + T VV S +V Sbjct: 185 FHEMEKSVEWKDVYSGIIKSVSFGVIIAWICCYKGYFAGHGAEGVSRATTAAVVMSSVMV 244 Query: 358 IIIDSLFAIFYF 369 +I D Sbjct: 245 LIWDYFLTSVLL 256 >gi|91781621|ref|YP_556827.1| ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91685575|gb|ABE28775.1| Putative ABC transporter, inner membrane subunit [Burkholderia xenovorans LB400] Length = 377 Score = 250 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 99/370 (26%), Positives = 171/370 (46%), Gaps = 16/370 (4%) Query: 8 VFRFAGNWKSPEISEIADD---VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-FME 63 + R +G W + ++ + + ++ DLS I +D +G + + + Sbjct: 19 IVRLSGQWTALALARDRATGHVIPLLLSLVGAEGIGGWDLSRIDRMDHVGGQALWRVWGH 78 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 K L I + +L+ K + +G I F Sbjct: 79 KMPADTTLTDTQRDIFERIALLDTVRETAEPVIK----------LDPFTRLGLAIFSFFE 128 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 +LG V+ + + +Y G +P+ L++F+ G V++ Sbjct: 129 HLYGGVAMLGRVVLDLLAIVRKPKI--TPWTEISANVYNAGTQALPITALVAFLIGIVLS 186 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA Sbjct: 187 YLSAQQLRLFGANQYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDA 246 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R MG+ LI PR+ AL +++PLL + N A+ G ++ I + F Sbjct: 247 MRVMGIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAARIVLGIDMSYFARALPG 306 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +AN++ GL K I IV GF + +S SLG+ TT VV SI+IVI+ D++ Sbjct: 307 VVPVANLWIGLGKGVVFGMLIAIVGCHFGFRIKANSQSLGEGTTTSVVTSITIVILADAV 366 Query: 364 FAIFYFAIGI 373 FAI + +G+ Sbjct: 367 FAILFQNVGL 376 >gi|192359616|ref|YP_001982090.1| ABC-type transport system, permease [Cellvibrio japonicus Ueda107] gi|190685781|gb|ACE83459.1| ABC-type transport system, permease component [Cellvibrio japonicus Ueda107] Length = 375 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 88/369 (23%), Positives = 179/369 (48%), Gaps = 18/369 (4%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFMEK 64 + GNW+ + A + S + + ++ + D+ A ++ + + Sbjct: 22 ILCLYGNWQLGSAPDGATLCASLMAASGTTQTLQLNTDQLGTWDSSLAIALLQLARWCDT 81 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + + ++ V ++QL L + + + + + + Sbjct: 82 HQITLDIRAVPEGLQQLLRLATAIPPHQPSQSNDRHPWH------------QSLQDAWQG 129 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + +G ++ K + ++ + G + +V LI+ + G ++A Sbjct: 130 TRTTLIFIGDTSLALSQWVRGQAKTRRSDIAFF--IEQAGPRALAIVTLIALLVGMILAY 187 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 G+ QL Q GA+++ DL+++ +RE+G L+TAV++AGR+G+A A++G+M++NEEIDA+ Sbjct: 188 LGSVQLRQLGAQVYVADLVALGMVREMGALMTAVIMAGRTGAAYAAQLGTMQVNEEIDAL 247 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 +TMG+ + L+ PR+ AL++ +PLL I AN ++G ++V D+ F + + Sbjct: 248 KTMGISSIEFLVLPRLLALVLVMPLLCIYANVIGMVGGALVATSM-DVNFIQYILQTQGA 306 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +I TGL+K+ F I I + G G +S+++G T VV++I +++ D+ F Sbjct: 307 VGWVDISTGLVKSVFFGVLIAIAGCQAGIHCGRNSDAVGMAATNAVVRAIVYLVVADAAF 366 Query: 365 AIFYFAIGI 373 I Y +GI Sbjct: 367 NILYDKLGI 375 >gi|328953206|ref|YP_004370540.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM 11109] gi|328453530|gb|AEB09359.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM 11109] Length = 256 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 73/263 (27%), Positives = 139/263 (52%), Gaps = 7/263 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 K+L +G+ + FI ++ L + G F YK +L++Q+Y +GV Sbjct: 1 MKDLLRTLGRATIDFIQEAGRMQLFLFQTL---GLFFLPPYKP----FNLVKQVYVIGVR 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +++L + TG V+ QG + L +FGAE +++ +RE+G +LTA+M+ GR+GS Sbjct: 54 SSSIILLTAMFTGMVLGLQGYYTLRKFGAESALGSAVALSLIRELGPVLTALMVTGRAGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 AI AEIG M+I E++DA+ TM ++ ++ ++ P++ A +I++PLLT +F I+G +V Sbjct: 114 AITAEIGIMRITEQLDALDTMAINPMQYVVMPKVIAGLIAVPLLTAFFDFVGIVGGYLVG 173 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + +FS + ++ G +K+ + +VA +G+ + + + Sbjct: 174 VVMLGVSSGSYFSGMIQSVETLDVNGGFVKSIVFGLTVTLVACYKGYFTSHGAEGVSQST 233 Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369 T VV + +++ D + F+ Sbjct: 234 TEAVVLAAILILGWDYVLTSFFM 256 >gi|307635079|gb|ADI85448.2| ABC transporter, membrane protein of unknown function DUF140 [Geobacter sulfurreducens KN400] Length = 380 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 87/375 (23%), Positives = 166/375 (44%), Gaps = 14/375 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S +G R G+W + + V + + S + + + D+ ++ Sbjct: 17 SADGTLSLRLEGDWLAGSLPLPPGAVEDELAVAPASR-LLFETGDLGRWDSGLITFLIRV 75 Query: 62 MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 G+ + +L +L + + + + + L I ++ Sbjct: 76 QALCAGQGMAFDGGNLPEGARRLLALATAVPEQTLTHGGSRPP--------LLERIADRV 127 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + + LG V G A +F+ L+ M G +P+V LISF+ Sbjct: 128 IGMWKSMVEMSAFLGEVTVACGRLLAGRARFRR--SELLAIMQECGAQALPIVSLISFLV 185 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G ++A GA QLS FGA+I+ L+ I +R +G ++T +++AGR+G+A A +G+M++N Sbjct: 186 GLILAFVGAVQLSMFGAQIYVASLVGIGIVRIMGAIMTGIIMAGRTGAAFAARLGTMQVN 245 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ T+G+ V L+ PR+ AL++ +PLL + A+ I+G V D+ + Sbjct: 246 EEIDALATLGISPVEFLVIPRVAALVLMMPLLCLYADLMGILGGLAVGVLMLDLNVTEYI 305 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + L + + GL + + + G G ++S+G T+ VV I ++ Sbjct: 306 TMTKKAVRLKDFWVGLFHSGVFGVLVALAGCLRGIQCGRSASSVGDAATSAVVTGIVSIV 365 Query: 359 IIDSLFAIFYFAIGI 373 + ++ + +GI Sbjct: 366 VATAVITVICNILGI 380 >gi|303247224|ref|ZP_07333498.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans JJ] gi|302491383|gb|EFL51271.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans JJ] Length = 368 Score = 249 bits (637), Expect = 4e-64, Method: Composition-based stats. Identities = 90/355 (25%), Positives = 161/355 (45%), Gaps = 12/355 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG---AELI 58 +G+ F+G W+ S + A+ KS + + + +T+ D+ I Sbjct: 3 ESDGVLTLTFSGTWRIDRPSPDLSPIRAALGKSPAPKTLAFESAKVTDWDSRFLTQCRAI 62 Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + + + L G+ + L L ++ +K + F ++ Sbjct: 63 LALAKAHGVTPDLSGLPAGAKSLLELAEKVPERQGAARKEASTPFLTRVADM-------A 115 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + +G V F+ +L +Y GV +P+V LIS + Sbjct: 116 FGAWQGVHNLLDFVGDVTLACLALAGGRAVFQR--SNLFALIYQAGVEALPIVSLISLLV 173 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G ++A GA QLSQFGA+I+ ++ I +R +G ++T +++AGR+G+A AE+G+M++N Sbjct: 174 GLILAFVGAIQLSQFGAQIYVSTIVGIAMVRVMGAIMTGIIMAGRTGAAYAAELGTMQVN 233 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+RT G + L+ PR+ AL++ +PLL I A+ I+G IV I + Sbjct: 234 EEIDALRTFGFSPTQFLVLPRMIALVLMMPLLCIYADIMGILGGFIVGVFMLKINPIQYL 293 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 + + LAN + GL+ + + + G G + ++G+ T VV S Sbjct: 294 THTWQSVPLANFWIGLVHSTVFGVLVAMAGCYRGMRCGRSALAVGQATTAAVVTS 348 >gi|283853770|ref|ZP_06370995.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B] gi|283570832|gb|EFC18867.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B] Length = 385 Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats. Identities = 91/352 (25%), Positives = 163/352 (46%), Gaps = 12/352 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDT---IGAELIMY 60 NGI +G W+ V A+ S + +A+T D+ ++ Sbjct: 22 NGILTLTLSGVWRLDRPFPPLAPVKDALATSPAPRKLVFAATAVTGWDSRFLADCRAVLV 81 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 + ++++ G+ L L + ++ +K + F S +L + Sbjct: 82 LARERGVEVEVSGLPEGAASLLDLAAKVPERQGAARKTSHAAFLESMGDLG-------LG 134 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 F + LG V F+ +L+ +Y GV +P+V LIS + G Sbjct: 135 FAQGVVNLLEFLGEVTLACLALLRGRAVFQR--SNLVTLIYQAGVEALPIVSLISLLVGL 192 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 ++A GA QLSQFGA+I+ ++ I +R +G ++T +++AGR+G+A AE+G+M++NEE Sbjct: 193 ILAFVGAIQLSQFGAQIYVSTIVGIAMVRVMGAIMTGIIMAGRTGAAYAAELGTMQVNEE 252 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA++T G + L+ PR+ AL++ LPLL + A+ I+G IV I + + Sbjct: 253 IDALKTFGFSPTQFLVLPRMIALVLMLPLLCVYADLMGILGGFIVGVFMLHINPIQYLTH 312 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 + LAN + GL+ + + + G G + ++G+ T+ VV Sbjct: 313 TWQSVPLANFWIGLVHSTVFGVLVAMAGCYRGMRCGRSALAVGQAATSAVVT 364 >gi|187922498|ref|YP_001894140.1| hypothetical protein Bphyt_0491 [Burkholderia phytofirmans PsJN] gi|187713692|gb|ACD14916.1| protein of unknown function DUF140 [Burkholderia phytofirmans PsJN] Length = 377 Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats. Identities = 99/370 (26%), Positives = 169/370 (45%), Gaps = 16/370 (4%) Query: 8 VFRFAGNWKSPEISEIADD---VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-FME 63 + R +G W + ++ + + + DLS I +D +G + + + Sbjct: 19 IVRLSGQWTALALARDRATGHVIPLLRSLVGAEGIGQWDLSRIDRMDHVGGQALWRVWGH 78 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 K L I + +L+ K + +G I F Sbjct: 79 KMPPDTTLTDTQRDIFERIALLDTVREKAEPVIRFDP----------LTRLGLAIFSFFE 128 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 +LG V+ + + +Y G +P+ L++F+ G V++ Sbjct: 129 HLYGGVAMLGRVVLDLLAIARKPKI--TPWTEISANIYNAGTKALPITALVAFLIGIVLS 186 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 A QL FGA + ++++ + +RE+G +L A+++AGRSGSAI A+IG M++ EE+DA Sbjct: 187 YLSAQQLRLFGANQYIVNILGLSVIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELDA 246 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R MG+ LI PR+ AL +++PLL + N A+ G ++ I + F Sbjct: 247 MRVMGIPHGLRLILPRVVALGVAMPLLVMWTNIIALTGGALAAKIALGIDMSYFARALPG 306 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +AN++ GL K I IV GF + +S SLG+ TT VV SI+IVI+ D++ Sbjct: 307 VVPVANLWIGLGKGVAFGMLIAIVGCHFGFRIKANSQSLGEGTTTSVVTSITIVILADAV 366 Query: 364 FAIFYFAIGI 373 FAI + +G+ Sbjct: 367 FAILFQNVGL 376 >gi|154173911|ref|YP_001408228.1| stas domain-containing protein [Campylobacter curvus 525.92] gi|112802195|gb|EAT99539.1| stas domain protein [Campylobacter curvus 525.92] Length = 368 Score = 248 bits (634), Expect = 9e-64, Method: Composition-based stats. Identities = 111/372 (29%), Positives = 186/372 (50%), Gaps = 14/372 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + +G+T F+F G + + ++I + + I K+ S D + +D + Sbjct: 11 AASGVTSFKFIGKFTYKD-AKILQNTLSRIAKA--RGSLRFDFLQLLHVDYA-----VLI 62 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + K K K T ++ ++IS + I N +G+KI Sbjct: 63 LVKNAIKGKKAEFVTSDTKIKAMISLLDDESIDFSYIPPQNKL----NFFARLGEKICDG 118 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + LG + T + + + L + GV+ V +V L +F+ G V Sbjct: 119 FKNLLEFGSFLGEFLIKTIKIFVNPMSLR--LREFSNYIKDGGVNAVFIVSLTAFLIGVV 176 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A G+ L+ FGA IF +++M +L LRE+ L+ A+++AGRS S+ A+IG+MK+ EEI Sbjct: 177 LAYLGSAMLANFGASIFIVEIMGMLTLREVAPLIAAIVVAGRSASSFTAQIGAMKLTEEI 236 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA++TMG + L+ PRI A+++SLP++ +A+ +I+G ++ DI FA + SRF Sbjct: 237 DAMKTMGFEPFNFLVLPRIIAMVLSLPIIIFIADAISILGQMLICQGVLDISFADYLSRF 296 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 L + G+IKAPF I I+ GF V ++ SLG+ T VV +I VI +D Sbjct: 297 KDMVELRHFAVGMIKAPFFGAIIAIIGCMRGFDVNSNAQSLGEMTTISVVNAIFWVIALD 356 Query: 362 SLFAIFYFAIGI 373 + FAI + + I Sbjct: 357 AFFAIIFMWLKI 368 >gi|223940090|ref|ZP_03631954.1| protein of unknown function DUF140 [bacterium Ellin514] gi|223891275|gb|EEF57772.1| protein of unknown function DUF140 [bacterium Ellin514] Length = 399 Score = 248 bits (634), Expect = 9e-64, Method: Composition-based stats. Identities = 95/369 (25%), Positives = 181/369 (49%), Gaps = 14/369 (3%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME-- 63 V R +G + + + A+ + V+++ +T D+ G + + Sbjct: 40 RFVLRLSGRLDADSTPFLWQRLQSAL-VVPPGATLEVNVAPLTYSDSAGFAFLYLLSKGC 98 Query: 64 -KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ L G+ ++ S + + ++P R ++L IG ++ Sbjct: 99 MTPQSQVSLNGLKPEYQKALQNYSMEDVQAYQGEQPVR-------QSLMDEIGMAVIAKT 151 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + + +G VIS G + ++R G + +P+V LIS + G VI Sbjct: 152 LEVRQKVIFVGDVISGLGYVLTHPRWMRRN--EIVRIFETAGANALPIVSLISLLLGLVI 209 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A + A ++FGA+I+ +L+ ++ +RE+ ++TA+++AGRSGSA AE+G+MK+NEE++ Sbjct: 210 AFEAAQPFARFGAKIYIANLIGLIMVRELSPVMTAILLAGRSGSAFAAELGTMKVNEELN 269 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ T+GLD +R L+ RI A ++ PLLTI + + ++G +V+ P ++ + + Sbjct: 270 ALETIGLDPMRFLVVQRILASLLLTPLLTIYSMATGVLGGVLVM-LGLGFPLSIAWHQLQ 328 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 S+ + +I G++KA + A G ++G+ T VV I ++II DS Sbjct: 329 SSVRINDIAFGILKAFVFGGIVAGTACLRGLETKSGPAAVGESTTRSVVSGILLIIIADS 388 Query: 363 LFAIFYFAI 371 +FAI F + Sbjct: 389 VFAILKFVL 397 >gi|295675321|ref|YP_003603845.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1002] gi|295435164|gb|ADG14334.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1002] Length = 389 Score = 248 bits (634), Expect = 1e-63, Method: Composition-based stats. Identities = 97/370 (26%), Positives = 171/370 (46%), Gaps = 16/370 (4%) Query: 8 VFRFAGNWKSPEISEIADD---VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-FME 63 + R +G W + ++ D + + + DLS + +D +G + + + Sbjct: 31 IVRLSGQWTALALARDRDTGHVIPQLRSLTGAQGIGGWDLSRVDSMDHVGGQALWRVWGR 90 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 K L I + +L+ + +G I F+ Sbjct: 91 KLPPGTALTDTQRDIFERIALLDTVRESAEPVTRFDP----------FTRLGLGIFSFVE 140 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 +LG V+ + + +Y G +P+ L++F+ G V++ Sbjct: 141 HMQGGVAMLGRVVLDLLAILRKPKL--TPWTEISANIYNAGARALPITALVAFLIGIVLS 198 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 A QL FGA F ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA Sbjct: 199 YLSAQQLRIFGANQFIVNILGLAVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDA 258 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R MG+ LI PR+ AL +++PLL + N ++ G ++ I + F + Sbjct: 259 MRVMGIPHGLRLILPRVIALAVAMPLLVMWTNVISLTGGALAAKLVLGIDMSFFARQLPV 318 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +AN++ GL K I I GF + +S SLG+ TT VV SI+IVI+ D++ Sbjct: 319 VVPIANLWIGLGKGAVFGMLIAIAGCHFGFRIKANSQSLGEGTTTSVVTSITIVILADAV 378 Query: 364 FAIFYFAIGI 373 FAI + +G+ Sbjct: 379 FAILFQNVGL 388 >gi|227822231|ref|YP_002826202.1| toulene ABC transporter, permease protein, putative [Sinorhizobium fredii NGR234] gi|227341231|gb|ACP25449.1| toulene ABC transporter, permease protein, putative [Sinorhizobium fredii NGR234] Length = 321 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 146/326 (44%), Positives = 204/326 (62%), Gaps = 11/326 (3%) Query: 50 IDTIGAELIMYFME----KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105 +DT GA +I FM + G+I +L + R+ ++++ Sbjct: 1 MDTAGAWIIRRFMNGIGSEAGGEIHFAHGGDRYVELVRALPGELRQPERSKRKDPL---- 56 Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 F+ L IG+ V D+ + +ILG + G +++ Q+ +GV Sbjct: 57 -FQRLFAPIGEVTVSIWTDTVAAMYILGSAVR--GAQMKLGRHAGVSPAAIVHQIDRMGV 113 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 P++ L+SF+ GA+IAQQGAFQL FGAEIF +DL+ ILQLREIGVLLTA+MIAGRSG Sbjct: 114 MATPIITLMSFLIGAIIAQQGAFQLRSFGAEIFVVDLVGILQLREIGVLLTAIMIAGRSG 173 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 SAI AEIGSMK+ EE+DA++ MGL V +L+ PR+ AL I+LPLLTI+ANF+A++GA++V Sbjct: 174 SAITAEIGSMKMREEVDALKVMGLSPVGVLVFPRLVALTIALPLLTIIANFAALVGAALV 233 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 W Y I A F +R +++ G+IKAPFMA IG+VA EG VG + SLG++ Sbjct: 234 AWTYSGITVATFVARLQEAVDFSSVAAGMIKAPFMALIIGVVAAVEGLKVGGSAESLGRR 293 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAI 371 VT+ VV+SI +VI+ID LFA+FY AI Sbjct: 294 VTSSVVKSIFVVILIDGLFAMFYAAI 319 >gi|88706598|ref|ZP_01104301.1| conserved hypothetical protein, membrane (DUF140) [Congregibacter litoralis KT71] gi|88699094|gb|EAQ96210.1| conserved hypothetical protein, membrane (DUF140) [Congregibacter litoralis KT71] Length = 370 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 97/376 (25%), Positives = 169/376 (44%), Gaps = 17/376 (4%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDT---IGAEL 57 +S +G + +G+W S E+ + + DS VD+S +++ D G Sbjct: 9 LSADGD-QLQISGDWTSAELPALVPLFTTLLE---TRDSPAVDVSEVSDWDPRLEAGLLR 64 Query: 58 IMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 + + I+ G QL +L + + F + IG Sbjct: 65 LQRLAQAKARDIRYLGAPDSQTQLMNLATAVAPYEAPAASATGFFSTKQLRRSLADIG-- 122 Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 +D LG V + + + G + ++ L S + Sbjct: 123 -----DDLLDSLEFLGGVGIALWRTLTGRSGMRR--REFVESLAQAGPQAIGIITLTSIL 175 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G ++A GA QL QFGA +F DL++I LRE+G L+TAV++AGR+G+A A++ +M+ Sbjct: 176 VGMILAYLGAAQLQQFGAAVFVADLVAIGMLREMGALMTAVVMAGRTGAAYAAQLSTMQT 235 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 NEEIDAI T+G+D + L++PR+ AL + +PLL + A+ ++G ++V P + Sbjct: 236 NEEIDAISTLGIDPMEFLVAPRVLALFLMMPLLVVYADALGVLGGAVVAGGMGVTPLQ-Y 294 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 S+ + T + F G+ K A I + G G +S ++G+ T VV ++ + Sbjct: 295 ISQLSAAITPTHFFVGIFKGFVFAALIATAGCRAGMNAGRNSEAVGQATTEAVVTAVVYL 354 Query: 358 IIIDSLFAIFYFAIGI 373 I+ D+ I + I Sbjct: 355 IVADAGINILCQLLDI 370 >gi|300114239|ref|YP_003760814.1| hypothetical protein Nwat_1606 [Nitrosococcus watsonii C-113] gi|299540176|gb|ADJ28493.1| protein of unknown function DUF140 [Nitrosococcus watsonii C-113] Length = 376 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 118/369 (31%), Positives = 194/369 (52%), Gaps = 12/369 (3%) Query: 9 FRFAGNWKSPEISEIAD--DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 G+W +E+ DV A + + +A V+LS + +DT GA L++ + Sbjct: 14 LHVIGDWTLEYYAELQSRIDVFKAQAEKNNTLNATVELSGLNRLDTAGAVLLVELLGAER 73 Query: 67 GKI---KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + G++ L + T + Q+ RS L G++I F Sbjct: 74 LAAFVKEGSGLTPARRALLDAVVRTMSMPLAPQRQARS----PLVALLAGTGERIELFWR 129 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 +GL++ + +++ L +L+ Q+ G++ + +V L++F+ GAV+A Sbjct: 130 QQLLLLGFIGLILGSLTATFWRPNRWR--LTALVAQIQQTGLNAIGIVALLTFLVGAVVA 187 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 GA L FGA I+++DL++ LRE GVLL A+++AGR+ SA A+IGSMK NEEIDA Sbjct: 188 FLGATVLQNFGATIYTVDLIAFSFLREFGVLLAAILLAGRTASAFTAQIGSMKANEEIDA 247 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +RT+GL +L+ PR+ AL++SLP+LT + S ++G +V DI F + Sbjct: 248 LRTLGLSTAELLVLPRVLALLLSLPILTFIGMLSGMLGGGLVCLVVLDISALQFVTILQ- 306 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +L + GL KAP A I + EGF V + S+G+ T+ VVQSI +VI++D++ Sbjct: 307 GISLKHFLVGLSKAPIFAFFIAAIGCLEGFKVSGSAQSVGEHTTSSVVQSIFMVILLDAI 366 Query: 364 FAIFYFAIG 372 A+F+ +G Sbjct: 367 AALFFMEMG 375 >gi|294084216|ref|YP_003550974.1| organic solvents resistance ABC transporter [Candidatus Puniceispirillum marinum IMCC1322] gi|292663789|gb|ADE38890.1| ABC-type transport system involved in resistance to organic solvents [Candidatus Puniceispirillum marinum IMCC1322] Length = 258 Score = 245 bits (627), Expect = 7e-63, Method: Composition-based stats. Identities = 69/265 (26%), Positives = 128/265 (48%), Gaps = 7/265 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 +IG+ ++ F LG + T ++ + L RQ +G Sbjct: 1 MTGFVRNIGRAVLNF-------LASLGRITLFTLAAIRWTFFPPYYWQQLWRQTLDIGYY 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PVV L + +G V+A Q ++F AE ++ + RE+G +L +M+AGR G+ Sbjct: 54 SLPVVGLTTLFSGMVLALQSYTGFARFSAEDTVATVVVLSVTRELGPVLAGLMVAGRIGA 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 ++ AEIG+M++ ++IDA+ T+ ++ L++PRI A + LP L ++ + + G IV Sbjct: 114 SMAAEIGTMRVTDQIDALDTLSTRPMQYLVAPRIMAGTLCLPFLVLIGDIIGVFGGYIVG 173 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 +++ SR +++I GL+KA I ++ G+ G + +G+ Sbjct: 174 VYRLGFNPSIYLSRTLEYLEVSDITLGLVKAAVFGFLIALMGCYHGYHSGRGAEGVGRAT 233 Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371 T VV S +++I + L YF + Sbjct: 234 TNAVVSSSILILIANYLVTALYFGV 258 >gi|67458472|ref|YP_246096.1| ABC transporter permease protein [Rickettsia felis URRWXCal2] gi|75537058|sp|Q4UNC7|Y080_RICFE RecName: Full=Probable ABC transporter permease protein RF_0080 gi|67004005|gb|AAY60931.1| ABC transporter permease protein [Rickettsia felis URRWXCal2] Length = 259 Score = 245 bits (626), Expect = 8e-63, Method: Composition-based stats. Identities = 71/265 (26%), Positives = 137/265 (51%), Gaps = 7/265 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N+ +GK+ +KF S + + +S + +L +IRQ+ ++G Sbjct: 2 LLNIANSVGKRTIKFAQSVGSFSLF-------SFAAVSSIIRPPLYLSLIIRQLLFIGFH 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PVV + +F +GAV+A Q S+F AE ++ + RE+G +L +M+AGR G+ Sbjct: 55 SLPVVAMTTFFSGAVLALQSYTGFSRFSAESSIATVVVLSLTRELGPVLAGLMVAGRVGA 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 +I AEI +M++ E++DA+ T+ D ++ L+ PR+ A II++P L ++ + ++G +V Sbjct: 115 SIAAEIATMRVTEQVDALYTLSTDPIKYLVFPRVIAAIITMPCLVLIGDIIGVMGGYLVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 D + + ++ +GL+KA I I++ G+ G + +G+ Sbjct: 175 VYKLDFNSTAYLTSTFHYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRAT 234 Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371 T+ VV S +++I + L +F + Sbjct: 235 TSAVVNSSILILISNYLITELFFKV 259 >gi|145589257|ref|YP_001155854.1| hypothetical protein Pnuc_1074 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047663|gb|ABP34290.1| protein of unknown function DUF140 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 393 Score = 245 bits (626), Expect = 9e-63, Method: Composition-based stats. Identities = 99/371 (26%), Positives = 174/371 (46%), Gaps = 16/371 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK- 64 + V+ G W ++ A + + + + S D++ + +D G I+ E Sbjct: 34 VNVYTLGGVWTQVRAAQDA-WLHSSSTVNSAAKSLTCDVTKVETLDGAGIAFIIALQEAQ 92 Query: 65 --YHGKIKLQGVSTHIEQLFSLISFTHRK-KIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 G +L G++ + L KPQR F N IG Sbjct: 93 TVAGGNFELIGLAERYQPLLKEFDPISNLFPAPVAKPQRGFVTN--------IGMGTANL 144 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 I DS LG + S+ + + + G++ +P++ L++F+ G + Sbjct: 145 IKDSKGLITFLGHLGSDLVWSVRNLKHVR--WGDFVNAAVEAGINALPIIGLVAFLIGVI 202 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 ++ Q A + QFGA F L ++ +RE+G L+TA+++AGRS +A AEIG+M +N E+ Sbjct: 203 LSFQAAIGMKQFGAVSFVGPLAALGIVREMGPLITAILLAGRSSAAFAAEIGTMTVNSEV 262 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ + GL +R L+ PR+ A I+ P+LT+ A+ +I + + + Y IPF F++ Sbjct: 263 DALVSGGLSPMRFLVVPRVLAGILVAPILTLFADIVSIFASMLTM-LIYGIPFINFYNGM 321 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 S + ++ +GLIKA + V G G + ++G T VV SI +++I+D Sbjct: 322 LSAVDVEDVTSGLIKATLFGVVVSAVGCLRGMQTGNGAAAVGISATRAVVSSIVMIVIVD 381 Query: 362 SLFAIFYFAIG 372 +FA + G Sbjct: 382 GIFAFISYKTG 392 >gi|257092687|ref|YP_003166328.1| hypothetical protein CAP2UW1_1065 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045211|gb|ACV34399.1| protein of unknown function DUF140 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 370 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 98/368 (26%), Positives = 175/368 (47%), Gaps = 15/368 (4%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-FMEKY 65 + AG+W + + + + + S A DL +I +D+ A ++ + ++ Sbjct: 15 LQVQLAGDWTLATLPQPISRFEARL-RELASREAAWDLLSIARLDSAAAVVLWRSWGRRW 73 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 + L G L + + + G+ + +++ Sbjct: 74 PASLALSG---EHRLLLERVEAIPADLPARPSERLGWLLVP--------GRLALAAVDNL 122 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 ++G ++ + G CA +Y G +PV LI F+ G V++ Sbjct: 123 AGMVALVGQMVLDVGHLCAHPRDIP--WREFSANLYKSGAQALPVTALIGFLIGIVLSYL 180 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A QL FGA++F ++L+ I +RE+G +L AV++AGRSGSA+ A++G M++ EEIDA+ Sbjct: 181 SALQLKTFGADVFIVNLLGISIVRELGPVLVAVLVAGRSGSAMTAQLGVMRVTEEIDALA 240 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 TMG+ L+ P+I AL +++PLL + + + I+G I D+ + F Sbjct: 241 TMGVSRSLRLVLPKIIALAVAMPLLVVWCSAAGIVGGMIAARLQMDLSYGFFIDTLPRVV 300 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 +AN++ G+ K IG+VA G V ++ SL + TT VV SI++ I++D++FA Sbjct: 301 PVANLWIGMSKGLVFGMLIGLVACHFGLRVKPNTESLSSQTTTSVVTSITVAILVDAVFA 360 Query: 366 IFYFAIGI 373 I + GI Sbjct: 361 IMTRSFGI 368 >gi|294506238|ref|YP_003570296.1| ABC transporter permease [Salinibacter ruber M8] gi|294342566|emb|CBH23344.1| ABC transporter, permease [Salinibacter ruber M8] Length = 371 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 88/364 (24%), Positives = 167/364 (45%), Gaps = 13/364 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + V G+W A V++ S + D S + + D+ + E Sbjct: 9 DDTLVLAPVGDWTLDRPLPDARAVMVNAAPSSPVAAVAFDTSGLGDWDSSLVTFLFEAAE 68 Query: 64 ---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 + +++ + T +E+L +L + L +G + Sbjct: 69 YGRAHDLDVRIDTLPTSLERLVALSQAVPEADTTPEAED--------TALLARLGHWGLA 120 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 +++ + LG + + G + + + Q S +P+V +IS + G Sbjct: 121 AYDEAHALVTFLGQAVRSVGAILTGRGRMRWRTFGVALQ--ESTASALPIVTVISLLVGL 178 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 ++A GA L +FGA+ F L+S LRE+G L+TA+++ GR+G+A AE+GSM++NEE Sbjct: 179 IVAFLGAVVLQRFGADYFVSYLVSYGMLRELGALMTAIIMTGRTGAAFAAELGSMQVNEE 238 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ T G+ + L++PRI A++++LP+LT+ A+ I+G V D+ F + Sbjct: 239 IDALETFGISPIDFLVTPRILAVVLALPMLTLYADALGIVGGMGVAVTMLDLTTTQFLTG 298 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 L++ G+ KA IG+ G G ++++G+ T+ VV I +++ Sbjct: 299 LLEPVVLSDALVGIFKAVVYGGIIGLAGCMRGLQAGDDASAVGQATTSAVVTGILLIVFA 358 Query: 361 DSLF 364 +++ Sbjct: 359 NAVI 362 >gi|160872193|ref|ZP_02062325.1| toluene tolerance protein Ttg2B [Rickettsiella grylli] gi|159120992|gb|EDP46330.1| toluene tolerance protein Ttg2B [Rickettsiella grylli] Length = 262 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 69/258 (26%), Positives = 125/258 (48%), Gaps = 1/258 (0%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 I +K+ + G + +F+ LI Q+Y++GV + ++++ Sbjct: 3 ILEKLQQLGQRGLRLLVNFGRATLFLTQLLIRKPRFRKSFPLLIEQLYFIGVLSLIIMVI 62 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 G V+ QG L++FGA L+++ +RE+G ++TA++ AGR+GSA+ AEIG Sbjct: 63 SGLFIGMVVGLQGYNTLNKFGASQQLGQLVALSVVRELGPVITALLFAGRAGSALTAEIG 122 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 MK E++ ++ MG+D + +ISPR W IS+P L I+ + AI G +V + + Sbjct: 123 LMKSTEQLASMEMMGIDPLWRVISPRFWGGFISMPFLMIIFSTVAIWGGYLVGVVWLGVD 182 Query: 294 FAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 F+S S +I G+IK+ + +A+ +G+ +G+ T VV Sbjct: 183 GGTFWSAMQSAVNFHDDIINGIIKSIVFGGVVTWIAVFQGYDTIPTPQGVGRATTHTVVY 242 Query: 353 SISIVIIIDSLFAIFYFA 370 S ++ +D + Sbjct: 243 SSLAILGLDFVLTAVMMG 260 >gi|218679258|ref|ZP_03527155.1| putative transmembrane component of ABC transporter [Rhizobium etli CIAT 894] Length = 281 Score = 243 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 135/281 (48%), Positives = 189/281 (67%), Gaps = 2/281 (0%) Query: 91 KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFK 150 ++ +P++ + + +GK ++ + +ILG + Sbjct: 1 EEPAKPEPEQQEKVSLVARIFAPVGKMTYDLWDNFAASMYILGSAVRGAQMKFGRGS--G 58 Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210 S++ Q+ ++GV VP+++L+SF+ GA+IAQQGAFQL FGAE+F +DL+ ILQLRE Sbjct: 59 VSPASIVNQIDHMGVRAVPIILLMSFLIGAIIAQQGAFQLRYFGAEVFVVDLVGILQLRE 118 Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 IGVLLT++MIAGRSGSAI AEIGSMK+ EEIDA++ MGL+ + +LI PR+ AL I+LPLL Sbjct: 119 IGVLLTSIMIAGRSGSAITAEIGSMKMREEIDALKVMGLNPIGVLIFPRLVALTIALPLL 178 Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330 T+LANF+++ GA+ V W Y I FA F SR H TL+ + +G+IKAPFMA IGIVA Sbjct: 179 TVLANFASLAGAAAVAWGYSGITFANFLSRLHEAVTLSTVLSGMIKAPFMALVIGIVAAV 238 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 EG VG + SLG+ VT VV++I +VI++D LFA+FY AI Sbjct: 239 EGLKVGGSAESLGQHVTASVVKAIFVVILMDGLFAMFYAAI 279 >gi|157964160|ref|YP_001498984.1| ABC transporter permease protein [Rickettsia massiliae MTU5] gi|157843936|gb|ABV84437.1| ABC transporter permease protein [Rickettsia massiliae MTU5] Length = 264 Score = 243 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 71/265 (26%), Positives = 136/265 (51%), Gaps = 7/265 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N+ +GK+ +KF S + + +S + +L +IRQ+ +G Sbjct: 7 LLNIANSVGKRTIKFAQSVGSFSLF-------SFAAVSSIIRPPLYLSLIIRQLLLIGFH 59 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PVV + +F +GAV+A Q S+F AE ++ + RE+G +L +M+AGR G+ Sbjct: 60 SLPVVAMTTFFSGAVLALQSYTGFSRFSAESSIATVVVLSLTRELGPVLAGLMVAGRVGA 119 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 +I AEI +M++ E++DA+ T+ D ++ L+ PR+ II++P L ++ + ++G +V Sbjct: 120 SIAAEIATMRVTEQVDALYTLSTDPIKYLVFPRVITAIITMPCLVLIGDIIGVMGGYLVG 179 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 D A + + ++ +GL+KA I I++ G+ G + +G+ Sbjct: 180 VYKLDFNSAAYLTSTFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRAT 239 Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371 T+ VV S +++I + L +F + Sbjct: 240 TSAVVNSSILILISNYLITELFFKV 264 >gi|83814459|ref|YP_444490.1| ABC transporter, permease [Salinibacter ruber DSM 13855] gi|83755853|gb|ABC43966.1| ABC transporter, permease [Salinibacter ruber DSM 13855] Length = 371 Score = 243 bits (622), Expect = 3e-62, Method: Composition-based stats. Identities = 88/364 (24%), Positives = 167/364 (45%), Gaps = 13/364 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + V G+W A V++ S + D S + + D+ + E Sbjct: 9 DDTLVLAPVGDWTLDRPLPDARAVMVNAAPSSPVAAVAFDTSGLGDWDSSLVTFLFEAAE 68 Query: 64 ---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 + +++ + T +E+L +L + L +G + Sbjct: 69 YGRAHDLDVRIDTLPTSLERLVALSQAVPEADTTPEAAD--------TALLARLGHWGLA 120 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 +++ + LG + + G + + + Q S +P+V +IS + G Sbjct: 121 AYDEAHALVTFLGQAVRSVGAILTGRGRMRWRTFGVALQ--ESTASALPIVTVISLLVGL 178 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 ++A GA L +FGA+ F L+S LRE+G L+TA+++ GR+G+A AE+GSM++NEE Sbjct: 179 IVAFLGAVVLQRFGADYFVSYLVSYGMLRELGALMTAIIMTGRTGAAFAAELGSMQVNEE 238 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ T G+ + L++PRI A++++LP+LT+ A+ I+G V D+ F + Sbjct: 239 IDALETFGISPIDFLVTPRILAVVLALPMLTLYADALGIVGGMGVAVTMLDLTTTQFLTG 298 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 L++ G+ KA IG+ G G ++++G+ T+ VV I +++ Sbjct: 299 LLEPVVLSDALVGIFKAVVYGGIIGLAGCMRGLQAGDDASAVGQATTSAVVTGILLIVFA 358 Query: 361 DSLF 364 +++ Sbjct: 359 NAII 362 >gi|15892052|ref|NP_359766.1| ABC transporter permease protein [Rickettsia conorii str. Malish 7] gi|34580917|ref|ZP_00142397.1| ABC transporter permease protein [Rickettsia sibirica 246] gi|229586334|ref|YP_002844835.1| ABC transporter permease protein [Rickettsia africae ESF-5] gi|81528535|sp|Q92JD8|Y129_RICCN RecName: Full=Probable ABC transporter permease protein RC0129 gi|15619171|gb|AAL02667.1| ABC transporter permease protein [Rickettsia conorii str. Malish 7] gi|28262302|gb|EAA25806.1| ABC transporter permease protein [Rickettsia sibirica 246] gi|228021384|gb|ACP53092.1| ABC transporter permease protein [Rickettsia africae ESF-5] Length = 259 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 73/265 (27%), Positives = 137/265 (51%), Gaps = 7/265 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N+ +GK+ VKF S + + +S + +L +IRQ+ ++G Sbjct: 2 LFNIANSVGKRTVKFAQSVGSFSLF-------SFAAVSSIIRPPLYLSLIIRQLLFIGFH 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PVV + +F +GAV+A Q S+F AE ++ + RE+G +L +M+AGR G+ Sbjct: 55 SLPVVAMTTFFSGAVLALQSYIGFSRFSAESSIATVVVLSLTRELGPVLAGLMVAGRVGA 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 +I AEI +M++ E+IDA+ T+ D ++ L+ PR+ II++P L ++ + ++G +V Sbjct: 115 SIAAEIATMRVTEQIDALYTLSTDPIKYLVFPRVITAIITMPCLVLIGDIIGVMGGYLVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 D A + + ++ +GL+KA I I++ G+ G + +G+ Sbjct: 175 VYKLDFNSAAYLTSTFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRAT 234 Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371 T+ VV S +++I + L +F + Sbjct: 235 TSAVVNSSILILISNYLITELFFKV 259 >gi|157803278|ref|YP_001491827.1| ABC transporter permease protein [Rickettsia canadensis str. McKiel] gi|157784541|gb|ABV73042.1| ABC transporter permease protein [Rickettsia canadensis str. McKiel] Length = 259 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 66/265 (24%), Positives = 135/265 (50%), Gaps = 7/265 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N+ +GK+ +KF + S + + +S + + +IRQ+ ++G Sbjct: 2 LLNIANAVGKRTIKFAQNIGSFSLF-------SFAAVSSIIRPPLYFSLIIRQLLFIGFY 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PVV + +F +GAV+A Q S+F AE ++ + RE+G +L +M+AGR G+ Sbjct: 55 SLPVVTMTTFFSGAVLALQSYNGFSRFSAESSIATVVVLSLTRELGPVLVGLMVAGRVGA 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 +I AEI +M++ E++DA+ T+ D ++ L+ PR+ ++++P L ++ + ++G +V Sbjct: 115 SIAAEIATMRVTEQVDALYTLSTDPIKYLVFPRVITAMLTMPCLVLIGDVIGVMGGYLVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + + ++ +GL+KA I I++ G+ G + +G+ Sbjct: 175 VYKLGFNSTAYLTSTFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRAT 234 Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371 T+ VV S +++I + L +F + Sbjct: 235 TSAVVNSSILILISNYLITELFFKV 259 >gi|239947145|ref|ZP_04698898.1| membrane protein [Rickettsia endosymbiont of Ixodes scapularis] gi|239921421|gb|EER21445.1| membrane protein [Rickettsia endosymbiont of Ixodes scapularis] Length = 261 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 72/267 (26%), Positives = 139/267 (52%), Gaps = 7/267 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N+ +GK+ +KF S + + +S+ + +L +IRQ+ ++G Sbjct: 2 LLNIANSVGKRTIKFAQSVGSFSLFIFAAVSSI-------IRPPLYLSLIIRQLLFIGFH 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + VV + +F +GAV+A Q S+F AE ++ + RE+G +L +M+AGR G+ Sbjct: 55 SLSVVAMTTFFSGAVLALQSYTGFSRFSAESSIATVVILSLTRELGPVLAGLMVAGRVGA 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 +I AEI +M++ E++DA+ T+ D ++ L+ PR+ A II++P L ++ + ++G +V Sbjct: 115 SIAAEIATMRVTEQVDALYTLSTDPIKYLVFPRVIAAIITMPCLVLIGDIIGVMGGYLVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 D A + + ++ +GL+KA I I++ G+ G + +G+ Sbjct: 175 VYKLDFNSAAYLTSTFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRAT 234 Query: 347 TTCVVQSISIVIIIDSLFAIFYFAIGI 373 T+ VV S +++I + L +F + I Sbjct: 235 TSAVVNSSILILISNYLITELFFKVQI 261 >gi|157828003|ref|YP_001494245.1| ABC transporter permease protein [Rickettsia rickettsii str. 'Sheila Smith'] gi|165932699|ref|YP_001649488.1| ABC transporter permease [Rickettsia rickettsii str. Iowa] gi|157800484|gb|ABV75737.1| ABC transporter permease protein [Rickettsia rickettsii str. 'Sheila Smith'] gi|165907786|gb|ABY72082.1| ABC transporter permease protein [Rickettsia rickettsii str. Iowa] Length = 259 Score = 242 bits (619), Expect = 5e-62, Method: Composition-based stats. Identities = 72/265 (27%), Positives = 137/265 (51%), Gaps = 7/265 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N+ +GK+ VKF S + + +S + +L +IRQ+ ++G Sbjct: 2 LFNIANSVGKRTVKFAQSVGSFSLF-------SFAAVSSIIRPPLYLSLIIRQLLFIGFH 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PVV + +F +GAV+A Q S+F AE ++ + RE+G +L +M+AGR G+ Sbjct: 55 SLPVVAMTTFFSGAVLALQSYIGFSRFSAESSIATVVVLSLTRELGPVLAGLMVAGRVGA 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 +I AEI +M++ E++DA+ T+ D ++ L+ PR+ II++P L ++ + ++G +V Sbjct: 115 SIAAEIATMRVTEQVDALYTLSTDPIKYLVFPRVITAIITMPCLVLIGDIIGVMGGYLVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 D A + + ++ +GL+KA I I++ G+ G + +G+ Sbjct: 175 VYKLDFNSAAYLTSTFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRAT 234 Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371 T+ VV S +++I + L +F + Sbjct: 235 TSAVVNSSILILISNYLITELFFKV 259 >gi|119897982|ref|YP_933195.1| hypothetical protein azo1691 [Azoarcus sp. BH72] gi|119670395|emb|CAL94308.1| conserved hypothetical membrane protein [Azoarcus sp. BH72] Length = 365 Score = 242 bits (619), Expect = 6e-62, Method: Composition-based stats. Identities = 99/366 (27%), Positives = 169/366 (46%), Gaps = 12/366 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 V +G+W +S V + A + + +D+ GA L+ + Sbjct: 10 VCELSGDWTLRALSPHIAGV--RAALAAVPADAAWSCAGVLRLDSFGAALLWQAWGRNW- 66 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 IE +L R + P + +G +V F Sbjct: 67 -------PATIEISAALREVVARVAAAAEHPPAPPRPFTTTEAITLLGAGLVGFRRHLAD 119 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +LG ++ + ++ +L + +Y V V +PV L+ F+ G V++ A Sbjct: 120 LTVLLGQLVLDVVHLLRHPREWP--VLEISANLYKVAVRAMPVTALVGFLIGVVLSYLSA 177 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA+IF ++++ + +RE+G +L +V++AGRSGSA+ A++G M++ EEIDA+ M Sbjct: 178 LQLRAFGADIFIVNILGLGIIRELGPVLVSVLVAGRSGSAMTAQLGVMRVTEEIDALAAM 237 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ L+ P++ AL +++PLL + + A+ G + W + F F L Sbjct: 238 GISASLRLVLPKVLALTLAMPLLVLWTSAVALFGGMVSAWMELGMSFGFFLETLPRVVPL 297 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN+F GL K I +VA G V ++ SL T VV +I++VI++D+LFAI Sbjct: 298 ANVFVGLTKGLVFGLLISLVACHFGLRVKPNTESLSANTTASVVTAITVVILVDALFAIA 357 Query: 368 YFAIGI 373 IG+ Sbjct: 358 TRRIGV 363 >gi|291287315|ref|YP_003504131.1| hypothetical protein Dacet_1405 [Denitrovibrio acetiphilus DSM 12809] gi|290884475|gb|ADD68175.1| protein of unknown function DUF140 [Denitrovibrio acetiphilus DSM 12809] Length = 256 Score = 242 bits (618), Expect = 6e-62, Method: Composition-based stats. Identities = 72/263 (27%), Positives = 134/263 (50%), Gaps = 7/263 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 G +V+ IN + S + + I ++ + LI+Q+ ++G + Sbjct: 1 MTKFFEFFGNPLVRLINATGSMSLMFFDTIRLI---FVPPFRLRL----LIKQIEFIGAN 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + V+IL TG V A Q +FGAE ++++ RE+G +L+A+M+A R+GS Sbjct: 54 SLSVIILTGSFTGMVFAFQSYIGFHKFGAEQIVGTVVALGMARELGPVLSAIMVAARAGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 AI AEIG+MK+ E++DA+ + +D V+ L PRI A +I +P+L +A F ++G +V Sbjct: 114 AITAEIGTMKVTEQVDALNALAVDPVQYLFVPRILAGLIVMPMLNAIAVFCGMVGGFLVS 173 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 I ++ + + ++ F+G++KA + +V +G+ + +GK Sbjct: 174 ITVLGINKTLYLNYMYQYIEFSDFFSGMVKAFVFGGIVTLVGCYKGYMTTGGAEGVGKST 233 Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369 T VV + ++++ D + F F Sbjct: 234 TESVVLACILILVFDYILTAFMF 256 >gi|15603974|ref|NP_220489.1| hypothetical protein RP096 [Rickettsia prowazekii str. Madrid E] gi|81554918|sp|Q9ZE51|Y096_RICPR RecName: Full=Probable ABC transporter permease protein RP096 gi|3860665|emb|CAA14566.1| unknown [Rickettsia prowazekii] gi|292571688|gb|ADE29603.1| ABC transporter permease protein [Rickettsia prowazekii Rp22] Length = 259 Score = 242 bits (618), Expect = 6e-62, Method: Composition-based stats. Identities = 70/265 (26%), Positives = 135/265 (50%), Gaps = 7/265 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + + +GK +KF + + +S K +L +IRQ+ ++G Sbjct: 2 LLKIAHLVGKHTIKFAQSVGIFSLF-------SFIAISSIIKPPLYLSLIIRQLLFIGFH 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PVV + +F +GAV+A Q S+F AE ++ + RE+G +L +++AGR G+ Sbjct: 55 SLPVVAMTTFFSGAVLALQSYTGFSRFSAENSIATVVVLSLTRELGPVLAGLIVAGRVGA 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 +I AEI +M++ E++DA+ T+ D ++ L+ PR+ A II++P L ++ + ++G +V Sbjct: 115 SIAAEIATMRVTEQVDALYTLSTDPIKYLVCPRVIAAIITMPCLVLIGDIIGVMGGYLVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 D + + ++ +GLIKA I I++ G+ G + +G+ Sbjct: 175 IYKLDFNSTAYLTSTFQYLEPIDVISGLIKATVFGFIISIISCYSGYYSGKGAKGVGRAT 234 Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371 T+ VV S +++I + L +F + Sbjct: 235 TSAVVNSSILILISNYLITELFFKV 259 >gi|328954039|ref|YP_004371373.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM 11109] gi|328454363|gb|AEB10192.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM 11109] Length = 377 Score = 242 bits (618), Expect = 7e-62, Method: Composition-based stats. Identities = 94/375 (25%), Positives = 171/375 (45%), Gaps = 12/375 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S +G+W AD V + S+ + + D + DT +M Sbjct: 12 SSADTLKVMISGDWLLGGELPAADRVQQRLEGSLGVRNLVFDTRELAHWDTGLLTFLMSL 71 Query: 62 M---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + + + G+ ++L L S KK ++ +R + +G + Sbjct: 72 ATFCSQQNIYLDRDGLPPGAKRLLELASAVPEKKDAHKVEER-------LSFLAFLGNET 124 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 V F + +G + +++ L LI Q VGV +P+V LI F+ Sbjct: 125 VNFFQSAGELLEFIGDAVIAVLRLIRGQAQYRRADLGLIMQA--VGVQALPIVSLICFLV 182 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G ++A GA QL FGA+I+ DL+ I +R + ++T +++AGR+G A A++G+M++N Sbjct: 183 GLILAFIGAIQLKLFGAQIYVADLVGIAMVRLMAAIMTGIVMAGRTGGAFAAQLGTMQVN 242 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 +EIDA++T+G+ + L+ PR+ AL + +PLL + AN I+G V I F ++ Sbjct: 243 QEIDALKTLGISPMEFLVLPRMLALALMMPLLCLYANVMGILGGMAVGVGMLGIGFIQYY 302 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 ++ + L N+ GL + + G G ++++G T+ VV +I +I Sbjct: 303 NQTAAAVGLWNLGIGLFSGTVFGVIVALAGCMRGMQCGRSASAVGDAATSAVVTAIVGII 362 Query: 359 IIDSLFAIFYFAIGI 373 + + I +GI Sbjct: 363 VSTAAITILCNFLGI 377 >gi|118579001|ref|YP_900251.1| hypothetical protein Ppro_0562 [Pelobacter propionicus DSM 2379] gi|118501711|gb|ABK98193.1| protein of unknown function DUF140 [Pelobacter propionicus DSM 2379] Length = 256 Score = 242 bits (618), Expect = 7e-62, Method: Composition-based stats. Identities = 71/263 (26%), Positives = 127/263 (48%), Gaps = 7/263 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 L IG + I L + G + +++Q+ ++G Sbjct: 1 MSALIQAIGHSTIGSIRALGRMGWFLVHSFITM-------VRTPGNPVHVLKQLSFIGAK 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + V+ L + TG V+ QG + L++FG+E +++ +RE+G +LTA+M+ GR+GS Sbjct: 54 SLFVIFLTAAFTGMVLGLQGYYTLTKFGSEGMLGTAVALSLIRELGPVLTALMVTGRAGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 AI AEIG M+I E+IDA+ TM LD + LI+P++ A +I+LPLL + + I G +V Sbjct: 114 AIAAEIGIMRITEQIDALETMALDPFKYLITPKLIAAMIALPLLCAIFDTIGIYGGWLVG 173 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 K + +FS + ++++G K+ I + +G+ G + + K Sbjct: 174 VKLLGVNPGAYFSEMEKSVVWRDVYSGFAKSFSFGVIIAWIGCYKGYFAGHGAEGVSKAT 233 Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369 T VV + ++++ D Sbjct: 234 TEAVVLTSVLILVWDYFLTSVLL 256 >gi|91206155|ref|YP_538510.1| ABC transporter permease protein [Rickettsia bellii RML369-C] gi|157826543|ref|YP_001495607.1| ABC transporter permease protein [Rickettsia bellii OSU 85-389] gi|122425169|sp|Q1RGU3|Y1340_RICBR RecName: Full=Probable ABC transporter permease protein RBE_1340 gi|91069699|gb|ABE05421.1| ABC transporter permease protein [Rickettsia bellii RML369-C] gi|157801847|gb|ABV78570.1| ABC transporter permease protein [Rickettsia bellii OSU 85-389] Length = 259 Score = 242 bits (618), Expect = 7e-62, Method: Composition-based stats. Identities = 67/265 (25%), Positives = 135/265 (50%), Gaps = 7/265 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N+ IGK+ ++ + + S + + +I+Q+ ++G Sbjct: 2 LLNIANSIGKRTIRLAQSIGKFSIF-------SLAAITSIIRPPLYFSLIIKQLLFIGFY 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PVV + +F +GAV+A Q S+F AE ++ + RE+G +L +M+AGR G+ Sbjct: 55 SLPVVAMTTFFSGAVLALQSYTGFSRFSAESSIATVVVLSLTRELGPVLAGLMVAGRVGA 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 +I AEIG+M++ E++DA+ T+ D ++ L+ P++ A II++P L ++ + ++G +V Sbjct: 115 SIAAEIGTMRVTEQVDALYTLSTDSIKYLVFPKVIAAIITMPCLVLIGDVIGVMGGYLVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 D + + + ++ +GL+KA I I++ G+ G + +G+ Sbjct: 175 VYKLDFNSSTYLTSTFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRAT 234 Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371 T+ VV S +++I + L +F + Sbjct: 235 TSAVVNSSILILISNYLITELFFKV 259 >gi|91792032|ref|YP_561683.1| hypothetical protein Sden_0670 [Shewanella denitrificans OS217] gi|91714034|gb|ABE53960.1| protein of unknown function DUF140 [Shewanella denitrificans OS217] Length = 369 Score = 242 bits (617), Expect = 8e-62, Method: Composition-based stats. Identities = 99/370 (26%), Positives = 174/370 (47%), Gaps = 18/370 (4%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFME 63 G+W+ + AD + AI QS S I+D A+ D+ A ++ + E Sbjct: 15 CHIALRGDWQLGH-ALDADSICAAIPS--QSRSVIIDTQALGLWDSSLAVALLQLSRWCE 71 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + + L ++QL L + P + +L + + + Sbjct: 72 QAELPLSLDACPPSLQQLLKLATEV---------PSNQTQSQAQLSLKQKLRANLTEQGQ 122 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 LG + + K + +I + G G+ +V LIS + G ++A Sbjct: 123 GVYDSLLFLGNSVLAISHWLRGKAKTRA--SDIIFFIEQAGPQGLAIVTLISLLVGMILA 180 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 G+ QL Q GA+++ DL++I +RE+G L+TAV++AGR+G+A A++G+M+ NEE+DA Sbjct: 181 YLGSVQLRQLGAQVYVADLVAIGMVREMGPLMTAVIMAGRTGAAYAAQLGTMQANEEVDA 240 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG+ + L+ PR+ AL+ +PL+ I ++ IIG IV + + + Sbjct: 241 LSVMGISAMEFLVVPRLVALVFIMPLMCIYSDAIGIIGGGIVANGM-GVSATQYLLQAQV 299 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +I TGL+K+ I I + G A G +SN++G T VV++I +++ D+ Sbjct: 300 AVDWLDITTGLVKSLIFGILIAIAGCQAGLACGRNSNAVGVATTKAVVKAIVFLVVSDAA 359 Query: 364 FAIFYFAIGI 373 I Y +GI Sbjct: 360 LNILYDKLGI 369 >gi|104780316|ref|YP_606814.1| toluene tolerance ABC efflux transporter permease [Pseudomonas entomophila L48] gi|95109303|emb|CAK14000.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas entomophila L48] Length = 265 Score = 242 bits (617), Expect = 8e-62, Method: Composition-based stats. Identities = 70/256 (27%), Positives = 136/256 (53%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 ++I F + +LG G + G L++Q+Y VGV + ++++ Sbjct: 8 ERIRLFGRSAIDVLAVLGRSCLFLGHALSGRGGIGGGFQLLVKQLYSVGVLSLAIIVVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+M Sbjct: 68 VFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +++PR+WA ISLPLL ++ + I G S V + + Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 187 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+ ++ + + ++ GLIK+ A + +A+ +G+ S + + T VV + Sbjct: 188 SFWGNMQNSVSFSDDVINGLIKSLVFAFVVTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|157825268|ref|YP_001492988.1| ABC transporter permease protein [Rickettsia akari str. Hartford] gi|157799226|gb|ABV74480.1| ABC transporter permease protein [Rickettsia akari str. Hartford] Length = 259 Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats. Identities = 69/265 (26%), Positives = 137/265 (51%), Gaps = 7/265 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N+ +GK+ +K S + + +S+ + +L +IRQ+ ++G Sbjct: 2 LLNIANLVGKRTIKCAQSVGSFSLF-------SFAAVSSTIRPPLYLSLIIRQLLFIGFH 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PVV + +F +GAV+A Q S+F AE ++ + RE+G +L +M++GR G+ Sbjct: 55 SLPVVAMTTFFSGAVLALQSYTGFSRFSAENSIATVVVLSLTRELGPVLAGLMVSGRVGA 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 +I AEI +M++ E++DA+ T+ D ++ L+ PR+ A I+++P L ++ + ++G +V Sbjct: 115 SIAAEIATMRVTEQVDALYTLSTDPIKYLVFPRVIATIVTMPCLVLIGDIIGVMGGYLVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 D + + ++ +GL+KA I I++ G+ G + +G+ Sbjct: 175 VYKLDFNSTAYLTSTLHYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRAT 234 Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371 T+ VV S I++I + L +F + Sbjct: 235 TSAVVNSSIIILISNYLITELFFKV 259 >gi|15599651|ref|NP_253145.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|107099960|ref|ZP_01363878.1| hypothetical protein PaerPA_01000981 [Pseudomonas aeruginosa PACS2] gi|116052487|ref|YP_792800.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14] gi|218893546|ref|YP_002442415.1| putative permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254238883|ref|ZP_04932206.1| hypothetical protein PACG_05051 [Pseudomonas aeruginosa C3719] gi|254244732|ref|ZP_04938054.1| hypothetical protein PA2G_05604 [Pseudomonas aeruginosa 2192] gi|296391165|ref|ZP_06880640.1| putative ABC transport system permease protein [Pseudomonas aeruginosa PAb1] gi|313107040|ref|ZP_07793243.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016] gi|9950690|gb|AAG07843.1|AE004859_12 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|115587708|gb|ABJ13723.1| putative toluene tolerance ABC efflux transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|126170814|gb|EAZ56325.1| hypothetical protein PACG_05051 [Pseudomonas aeruginosa C3719] gi|126198110|gb|EAZ62173.1| hypothetical protein PA2G_05604 [Pseudomonas aeruginosa 2192] gi|218773774|emb|CAW29588.1| probable permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|310879745|gb|EFQ38339.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016] Length = 265 Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats. Identities = 66/256 (25%), Positives = 129/256 (50%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 ++I F LG G L L++Q+Y VGV + ++++ Sbjct: 8 ERIRLFGRAGLDVVAALGRSTLFLGHALLGRRTPGTGLHLLVKQLYSVGVLSLAIIVVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L +G+E ++++ LRE+G ++T ++ AGR+GSA+ AEIG+M Sbjct: 68 LFIGMVLALQGYNILISYGSEQAVGQMVALTLLRELGPVVTGLLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +++PR+WA IS+PLL + + I G ++V + + Sbjct: 128 KATEQLSSLEMIGVDPLKYIVAPRLWAGFISMPLLAAIFSVVGIWGGAMVAVDWLGVYEG 187 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ ++ ++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 188 SFWANMQNSVQFTEDVLNGVIKSIVFAFVVTWIAVYQGYDCEPTSEGISRATTRTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|302036233|ref|YP_003796555.1| putative toluene efflux ABC transporter ATP-binding protein [Candidatus Nitrospira defluvii] gi|300604297|emb|CBK40629.1| ABC transporter, membrane component, putative ATP-dependent toluene efflux transporter [Candidatus Nitrospira defluvii] Length = 255 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 68/259 (26%), Positives = 127/259 (49%), Gaps = 7/259 (2%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170 IG+ + V+S+ ++ + +++Q+ ++G V Sbjct: 4 IARIGRYTIDLTEQMGRMMLF---VLSSFAWLTRPPFR----VYQIVKQLNFIGYKSTFV 56 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 V+L + TG V+A QG + L +FG+E +++ +RE+G +L A+M+ R+GSA+ A Sbjct: 57 VVLTAVFTGMVLALQGHYTLRKFGSEAVLGSAVALSIIRELGPVLAALMVTARAGSAMTA 116 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 EIG M+I E+IDA+ TM ++ ++ LI P++ A +I++PLL L + I G +V + Sbjct: 117 EIGIMRITEQIDALDTMAINPLQYLIGPKLVASLIAVPLLVALFDVVGIYGGYVVGVQLL 176 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 + ++S S +++ G++K+ I V +GF + LG T V Sbjct: 177 NGNEGAYWSSIESAVEWKDVYGGILKSISFGLLISWVCCYKGFHTKHSAEGLGTATTEAV 236 Query: 351 VQSISIVIIIDSLFAIFYF 369 V S ++++ D Sbjct: 237 VLSAVLILVWDYFLTSVLL 255 >gi|49082890|gb|AAT50845.1| PA4455 [synthetic construct] Length = 266 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 66/256 (25%), Positives = 129/256 (50%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 ++I F LG G L L++Q+Y VGV + ++++ Sbjct: 8 ERIRLFGRAGLDVVAALGRSTLFLGHALLGRRTPGTGLHLLVKQLYSVGVLSLAIIVVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L +G+E ++++ LRE+G ++T ++ AGR+GSA+ AEIG+M Sbjct: 68 LFIGMVLALQGYNILISYGSEQAVGQMVALTLLRELGPVVTGLLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +++PR+WA IS+PLL + + I G ++V + + Sbjct: 128 KATEQLSSLEMIGVDPLKYIVAPRLWAGFISMPLLAAIFSVVGIWGGAMVAVDWLGVYEG 187 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ ++ ++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 188 SFWANMQNSVQFTEDVLNGVIKSIVFAFVVTWIAVYQGYDCEPTSEGISRATTRTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|152985726|ref|YP_001350363.1| ABC transporter permease [Pseudomonas aeruginosa PA7] gi|150960884|gb|ABR82909.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7] Length = 265 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 65/256 (25%), Positives = 129/256 (50%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +++ F LG G L L++Q+Y VGV + ++++ Sbjct: 8 ERVRLFGRAGLDVVAALGRSTLFLGHALLGRRTPGAGLHLLVKQLYSVGVLSLAIIVVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L +G+E ++++ LRE+G ++T ++ AGR+GSA+ AEIG+M Sbjct: 68 LFIGMVLALQGYNILISYGSEQAVGQMVALTLLRELGPVVTGLLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +++PR+WA IS+PLL + + I G ++V + + Sbjct: 128 KATEQLSSLEMIGVDPLKYIVAPRLWAGFISMPLLAAIFSVVGIWGGAMVAVDWLGVYEG 187 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ ++ ++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 188 SFWANMQNSVQFTEDVLNGVIKSIVFAFVVTWIAVYQGYDCEPTSEGISRATTRTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|149190595|ref|ZP_01868864.1| putative ABC superfamily transport protein [Vibrio shilonii AK1] gi|148835593|gb|EDL52561.1| putative ABC superfamily transport protein [Vibrio shilonii AK1] Length = 262 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 74/254 (29%), Positives = 125/254 (49%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I K + S G S + K LI+Q++ VGV + ++++ Sbjct: 8 IQKVGQRTLSLCQSWGRATFMLFGVLFSKPQPKKHFPLLIKQLHNVGVQSLAIIMVSGLF 67 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V++ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 68 IGMVLSLQGYVVLVDYGAEGSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 127 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D ++ +ISPR WA +IS+PLL ++ I G +V + I F Sbjct: 128 TEQLSSMEMMAVDPLKRVISPRFWAGVISMPLLAMIFMAIGIWGGQLVGVDWKGIDHGSF 187 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S S+ L +I +IK A + +A+ G+ S + + T VV S Sbjct: 188 WSAMQSSVELGRDIGNSVIKCLVFAITVTWIALFNGYDAIPTSEGISQATTRTVVHSSLA 247 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 VLGLDFVLTALMFG 261 >gi|315125511|ref|YP_004067514.1| ABC transporter membrane protein [Pseudoalteromonas sp. SM9913] gi|315014024|gb|ADT67362.1| ABC transporter membrane protein [Pseudoalteromonas sp. SM9913] Length = 259 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 81/264 (30%), Positives = 132/264 (50%), Gaps = 8/264 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 +L IG K + + LG FK L+RQ+Y VG Sbjct: 1 MLDLLQKIGHKTL-------GRFAALGRSTQMLASALWHVPNFKKGTPLLVRQLYMVGSQ 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++++ G V+A QG L +GAE L+++ LRE+G ++TA++ AGR+GS Sbjct: 54 SLLIIVVSGLFIGMVLALQGYTVLVDYGAEDSLGPLVALSLLRELGPVVTALLFAGRAGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+P+L ++ + AIIGA +V Sbjct: 114 ALTAEIGLMKATEQLSSLEMMAIDPLRRIIAPRFWAGLISMPMLALIFSAVAIIGAHLVG 173 Query: 287 WKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + + F+S S + +I GLIK+ A + +A+ +G+ S + K Sbjct: 174 VDWLGVDTGSFWSIMQSQVSFEKDILNGLIKSIVFAIVVTWIALYKGYDCVPTSEGISKA 233 Query: 346 VTTCVVQSISIVIIIDSLFAIFYF 369 T VV S V+ D + F Sbjct: 234 TTETVVHSSLAVLGFDFILTAVMF 257 >gi|85858832|ref|YP_461034.1| organic solvents resistance ABC transporter permease [Syntrophus aciditrophicus SB] gi|85721923|gb|ABC76866.1| ABC-type transport system involved in resistance to organic solvents, permease component [Syntrophus aciditrophicus SB] Length = 259 Score = 240 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 76/265 (28%), Positives = 131/265 (49%), Gaps = 7/265 (2%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 +G++I+ + + G +I A +++ L + +QM +VG Sbjct: 2 GILTAFADSLGRRILHGVEEM-------GRIILLFLSVVAWTFRPPLRLRLIFKQMEFVG 54 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V + VV+L TG V+A QG F AE +++ RE+G +LT++M+ R+ Sbjct: 55 VKSIFVVVLTGAFTGMVMALQGYHGFKMFSAESLVGATVALGMTRELGPVLTSLMVTARA 114 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 GSA+ AE+G+M++ E+IDA+ M + ++ LI PR+ A I+ LPLLT++++F I+G Sbjct: 115 GSAMAAELGTMRVTEQIDALYVMAANPIQHLIVPRMIASILMLPLLTVVSDFVGILGGYF 174 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 V +I VF L +I+ GLIKA + ++ +GF + +G+ Sbjct: 175 VGVSVLNINEGVFVKNITRIVELGDIYNGLIKAACFGLILSLIGCYKGFHARGGAEGVGR 234 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYF 369 T VV S +++ D F Sbjct: 235 ATTEAVVLSSISILVGDYFLTAIMF 259 >gi|317484538|ref|ZP_07943446.1| hypothetical protein HMPREF0179_00797 [Bilophila wadsworthia 3_1_6] gi|316924199|gb|EFV45377.1| hypothetical protein HMPREF0179_00797 [Bilophila wadsworthia 3_1_6] Length = 388 Score = 240 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 86/377 (22%), Positives = 162/377 (42%), Gaps = 11/377 (2%) Query: 2 SENGITVFRFAGNWKSPEISEI---ADDVVMAINKSIQSDSAIVDLSA--ITEIDTIGAE 56 S G+ F+G WK + D + + + ++ V+L + E D+ Sbjct: 18 SSEGVLRVIFSGEWKRDLLGPNFFTERDEALRETERLLKEARSVELLGEALGEWDSG--- 74 Query: 57 LIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116 ++ + K + +L I + + + +G Sbjct: 75 -VLVVTTRLVTLAKEHNIPLDDARLPEGIRNLTKLALAVPPNTAAQRKAQKTTFLERVGG 133 Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + +C +G ++ + G L Q GV +P+V LIS Sbjct: 134 FTLAVPRMACDIFDFIGELVLSAGRLFRGRSSCTPGNAWLAVQ--ESGVDALPIVSLISL 191 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 + G ++A G QL FGAEI+ L+++ R +G ++T +++AGR+G++ A IG+M+ Sbjct: 192 LVGLILAFVGVIQLKMFGAEIYVSSLVAVSMTRIMGAIMTGIILAGRTGASYAAVIGTMQ 251 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 +NEEIDA+ T+G+ LI PR+ AL PLL + ++F I+G IV + Sbjct: 252 VNEEIDALTTLGVAPSDYLIMPRVLALTAMTPLLVLYSDFMGIMGGFIVGVGILGLDPME 311 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +++ + N++ G++ I I +G G ++ ++GK T+ VV SI Sbjct: 312 YYTFTQKGFNINNLWVGMVHGAVYGMLIAITGCYQGLRCGRNAEAVGKATTSAVVYSIVG 371 Query: 357 VIIIDSLFAIFYFAIGI 373 +++ ++ I + I Sbjct: 372 IVLSTAVLTILCNILNI 388 >gi|238650558|ref|YP_002916410.1| ABC transporter permease protein [Rickettsia peacockii str. Rustic] gi|238624656|gb|ACR47362.1| ABC transporter permease protein [Rickettsia peacockii str. Rustic] Length = 259 Score = 240 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 71/265 (26%), Positives = 137/265 (51%), Gaps = 7/265 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N+ +GK+ VKF S + + +S + +L +IRQ+ ++G Sbjct: 2 LFNIANSVGKRTVKFAQSVGSFSLF-------SFAAVSSIIRPPLYLSLIIRQLLFIGFH 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PVV + +F +GAV+A Q S+F AE ++ + RE+G +L +M+AGR G+ Sbjct: 55 SLPVVAMTTFFSGAVLALQSYIGFSRFSAESSIATVVVLSLTRELGPVLAGLMVAGRVGA 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 +I AEI +M++ E++DA+ T+ D ++ L+ PR+ II++P L ++ + ++G +V Sbjct: 115 SIAAEIATMRVTEQVDALYTLSTDPIKYLVFPRVITAIITMPCLVLIGDIIGVMGGYLVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 D A + + ++ +GL+KA I I++ G+ G + +G+ Sbjct: 175 VYKLDFNSAAYLTSTFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRAT 234 Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371 T+ VV + +++I + L +F + Sbjct: 235 TSAVVNASILILISNYLITELFFKV 259 >gi|114777488|ref|ZP_01452485.1| ABC-type transport system involved in resistance to organic solvents [Mariprofundus ferrooxydans PV-1] gi|114552270|gb|EAU54772.1| ABC-type transport system involved in resistance to organic solvents [Mariprofundus ferrooxydans PV-1] Length = 257 Score = 240 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 80/239 (33%), Positives = 125/239 (52%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +GL S L L++Q VGV +PVV+L + TG V+A Q Sbjct: 19 IGLYASTFAGTVRRMSSRPWHLRMLLQQAEEVGVQSLPVVMLTALFTGMVLALQSYIVFH 78 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 +F AE + ++S+ +RE+G +L +M+AGR G+A AE+G+M++ E+IDA+ T+ D Sbjct: 79 RFAAESLTGLVVSMSLVRELGPVLVGLMVAGRVGAAFAAELGTMRVTEQIDALWTLSTDP 138 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 VR LI PR+ A+ + +PLL ++A+F I G + D +V+ L++ + Sbjct: 139 VRYLIMPRLIAVTLMMPLLVVVADFIGIYGGYAISIYLLDQNPSVYIENTTQYMELSDFY 198 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 TGL+KA F IGI+ EGF + +G T VV S ++I D + FA Sbjct: 199 TGLVKAGFFGILIGIIGCTEGFNCKGGAAGVGTATTRAVVISCMSILISDYFLTAWMFA 257 >gi|254284160|ref|ZP_04959128.1| ABC transporter permease protein [gamma proteobacterium NOR51-B] gi|219680363|gb|EED36712.1| ABC transporter permease protein [gamma proteobacterium NOR51-B] Length = 377 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 95/365 (26%), Positives = 171/365 (46%), Gaps = 15/365 (4%) Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME--KYHGK 68 G+W+S + ++ + VD + D+ L++ + G Sbjct: 26 LKGSWESSAVLP---ELGALFQPDDTVTALRVDALEVARWDSRLISLLLKLHRYCESRGI 82 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + QL +L + + +G ++ F+N Sbjct: 83 SITTELPEGASQLLALAVAVPPAVESPSQSAGWLHSLNPLPYLERLGARVTDFLN----- 137 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G ++S+TG + + + L+ Y G + +P++ L S + G ++ GA Sbjct: 138 --FVGSLVSSTGRVVTG--RGRVRVSDLLAFAYQTGPNALPIIGLTSLLVGMILGYLGAV 193 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 QL QFGA IF DL++I LRE+G L+TA++IAGR+G+A A++G+M++NEE+DAI +G Sbjct: 194 QLQQFGAGIFVADLVTIGVLREMGALMTAIIIAGRTGAAYAAQLGTMRVNEEVDAIEILG 253 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + + L+ PR+ A+ + +PLL++ A I+G IV I ++++ ++ L Sbjct: 254 ISLMDFLVLPRVLAVTLMVPLLSLYAAIMGIVGGGIVSIS-LGITPLQYWTQAQTSLGLD 312 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 ++ GL KA IGI + G G S +GK TT VV ++ +I+ D+ + Sbjct: 313 HLLVGLSKALLFGALIGIAGCRAGMQSGRSSEGVGKATTTAVVVALVYLILADAAVNLLC 372 Query: 369 FAIGI 373 +GI Sbjct: 373 QLLGI 377 >gi|325294995|ref|YP_004281509.1| hypothetical protein Dester_0809 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065443|gb|ADY73450.1| protein of unknown function DUF140 [Desulfurobacterium thermolithotrophum DSM 11699] Length = 260 Score = 240 bits (612), Expect = 4e-61, Method: Composition-based stats. Identities = 77/260 (29%), Positives = 132/260 (50%), Gaps = 7/260 (2%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 L IG+ + F+ S I + +FK +L Q+ +G + Sbjct: 3 KLLEAIGRVTINFLEFWGSWLII---SVKAIVLAFRKPIRFKHYL----YQLASIGTGSL 55 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 PV+ + S TG VIA + +F AE +++I RE+G +LTA++I RSGSA+ Sbjct: 56 PVIAITSLFTGGVIALETYEAFHRFNAEYMIGGVVAISMARELGPVLTALLITARSGSAM 115 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG+MK+ E+IDA+R M ++ ++ LI+PR++ +I++ LLTI+++ IG IV Sbjct: 116 AAEIGTMKVTEQIDALRMMAVNPIKYLITPRVYTSVIAVTLLTIISDIVGYIGGYIVSVV 175 Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 ++I ++ + A + +++ GLIKA I ++ G+ + +G+ T Sbjct: 176 VFNINKTLYIRYTQNLAEMNDVYHGLIKAAIFGFLIATISCLYGYFTKGGAKGVGESTTK 235 Query: 349 CVVQSISIVIIIDSLFAIFY 368 VV S ++I D L Sbjct: 236 AVVVSSISILIFDYLITFIL 255 >gi|269104097|ref|ZP_06156794.1| uncharacterized ABC transporter permease component YrbE [Photobacterium damselae subsp. damselae CIP 102761] gi|268163995|gb|EEZ42491.1| uncharacterized ABC transporter permease component YrbE [Photobacterium damselae subsp. damselae CIP 102761] Length = 260 Score = 239 bits (611), Expect = 4e-61, Method: Composition-based stats. Identities = 76/265 (28%), Positives = 133/265 (50%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + IG++ + + +L G K F L L++Q+Y VGV Sbjct: 2 ITDFIAAIGRRTLNLCKTVGRASLML------YGALICKPQPRKMFPL-LLKQLYSVGVL 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++++ G V++ QG L FGAE ++++ LRE+G ++TA++ AGR+GS Sbjct: 55 SIAIILVSGLFIGMVLSLQGYIVLVDFGAETSLGQMVALSLLRELGPVVTALLFAGRAGS 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+PLL ++ I G +V Sbjct: 115 ALTAEIGLMKATEQLSSMEMMAVDPLRRVIAPRFWAGVISMPLLAMMFTAVGIWGGQLVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + I + ++S S+ + +I GL+KA A + +A+ G+ S + + Sbjct: 175 VDWKGIDYGSYWSVMQSSVDVWYDIGNGLLKAVVFAITVTWIAVFNGYDAVPTSEGISRA 234 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV S V+ +D + F Sbjct: 235 TTRTVVNSSLAVLGLDFVLTALMFG 259 >gi|27364141|ref|NP_759669.1| ABC transporter permease YrbE [Vibrio vulnificus CMCP6] gi|320157526|ref|YP_004189905.1| ABC transporter permease YrbE [Vibrio vulnificus MO6-24/O] gi|27360259|gb|AAO09196.1| Uncharacterized ABC transporter, permease component YrbE [Vibrio vulnificus CMCP6] gi|319932838|gb|ADV87702.1| uncharacterized ABC transporter permease component YrbE [Vibrio vulnificus MO6-24/O] Length = 262 Score = 239 bits (611), Expect = 4e-61, Method: Composition-based stats. Identities = 72/254 (28%), Positives = 125/254 (49%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I S G A + + L L++Q+Y VGV + ++++ Sbjct: 8 ISALGRRFLSLCQSFGKASLMLAGALAGRPQPRKTLPLLVKQIYNVGVQSLAIIVVSGLF 67 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V++ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 68 IGMVLSLQGYVILVDYGAEGSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 127 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D ++ +I+PR+WA IIS+PLL ++ I G +V + I F Sbjct: 128 TEQLSSMEMMAVDPLKRIIAPRLWAGIISMPLLAMIFMAVGIWGGQLVGVDWKGIDHGSF 187 Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S ++ L +I +IK A + +A+ G+ S + + T VV S Sbjct: 188 WSAMQASVELGQDIGNSMIKCVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLA 247 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 VLGLDFVLTALMFG 261 >gi|224418846|ref|ZP_03656852.1| toluene ABC transporter permease [Helicobacter canadensis MIT 98-5491] Length = 375 Score = 239 bits (611), Expect = 4e-61, Method: Composition-based stats. Identities = 106/375 (28%), Positives = 183/375 (48%), Gaps = 18/375 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINK-SIQSDSAIVDLSAITEIDTIGAELIMYF 61 +N I + + +G W +I +++ ++ + + ++L+ ++D G E++ + Sbjct: 13 DNDIYILKLSGLWDY----KIPKSLLLRLDSIKLTNVKIKIELAENFDLDFCGGEILERW 68 Query: 62 MEKYHGK-IKLQGV---STHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 + K I L+ + +Q+F +++ + P + F LH+ + Sbjct: 69 ILALESKNIVLENALKNHSKSQQIFQILAT-------RKNPLKQDMVQDFIKLHWDSFQI 121 Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I F DS G ++ + L + + + V + +V L F+ Sbjct: 122 IKGFFKDSLMAIGFFGEILYAWFSSLLQPKNIR--LKATLYCIQESLVKAIGIVALACFL 179 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G VIA QG+ QL QFGA I +++ S+L LRE+ ++TA++IAGRS SA AEIG M+ Sbjct: 180 IGIVIAYQGSIQLGQFGASILIVEMSSMLTLREMAPIITAIIIAGRSASAFSAEIGMMRA 239 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 +EIDA+R MG D + L+ PR+ AL + LPL+ +A+ ++GA +V I F Sbjct: 240 TQEIDAMRVMGFDPITFLVLPRMLALCLVLPLVVFIADLFGLLGAMLVCQLQLGIGTEQF 299 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 RF + + + G+ KAPF I V GF V + S+G T VV+SI +V Sbjct: 300 VERFLQVVDMRHFWVGIAKAPFFGLIISFVGCFHGFIVAKDTRSIGVHTTKSVVESIFLV 359 Query: 358 IIIDSLFAIFYFAIG 372 I D+L ++ + +G Sbjct: 360 IAFDALCSVVFTEMG 374 >gi|77361458|ref|YP_341033.1| ABC transporter membrane protein [Pseudoalteromonas haloplanktis TAC125] gi|76876369|emb|CAI87591.1| putative transport protein (ABC superfamily, membrane) [Pseudoalteromonas haloplanktis TAC125] Length = 260 Score = 239 bits (611), Expect = 4e-61, Method: Composition-based stats. Identities = 82/264 (31%), Positives = 134/264 (50%), Gaps = 8/264 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N IG K + A++L + + FK LIRQ+Y VG Sbjct: 2 MLNFLQKIGHKTLGRFAALGRSANMLFGALVHI-------PNFKKGTPLLIRQLYMVGSQ 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++++ G V+A QG L +GAE L+++ LRE+G ++TA++ AGR+GS Sbjct: 55 SLLIIVVSGLFIGMVLALQGYTVLVGYGAEDSLGPLVALSLLRELGPVVTALLFAGRAGS 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ ++ M +D ++ +I+PR WA +IS+PLL ++ + AIIGA +V Sbjct: 115 ALTAEIGLMKATEQLSSLEMMAIDPLKRIIAPRFWAGLISMPLLALIFSAVAIIGAHLVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + + F+S S + +I G+IK+ A + +A+ +G+ S + K Sbjct: 175 VDWLGVDTGSFWSIMQSQVSFQQDILNGIIKSVVFAIVVTWIALYKGYDCVPTSEGISKA 234 Query: 346 VTTCVVQSISIVIIIDSLFAIFYF 369 T VV S V+ D L F Sbjct: 235 TTETVVHSSLAVLGFDFLLTAVMF 258 >gi|37678640|ref|NP_933249.1| ABC-type transport system, permease component [Vibrio vulnificus YJ016] gi|37197380|dbj|BAC93220.1| ABC-type transport system, permease component [Vibrio vulnificus YJ016] Length = 262 Score = 239 bits (611), Expect = 5e-61, Method: Composition-based stats. Identities = 71/251 (28%), Positives = 124/251 (49%), Gaps = 1/251 (0%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 S G A + + L L++Q+Y VGV + ++++ G Sbjct: 11 LGRRFLSLCQSFGKASLMLAGALAGRPQPRKTLPLLVKQIYNVGVQSLAIIVVSGLFIGM 70 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V++ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK E+ Sbjct: 71 VLSLQGYVILVDYGAEGSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQ 130 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 + ++ M +D ++ +I+PR+WA IIS+PLL ++ I G +V + I F+S Sbjct: 131 LSSMEMMAVDPLKRIIAPRLWAGIISMPLLAMIFMAVGIWGGQLVGVDWKGIDHGSFWSA 190 Query: 301 FHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 ++ L +I +IK A + +A+ G+ S + + T VV S V+ Sbjct: 191 MQASVELGQDIGNSMIKCVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLAVLG 250 Query: 360 IDSLFAIFYFA 370 +D + F Sbjct: 251 LDFVLTALMFG 261 >gi|303327433|ref|ZP_07357874.1| ABC transporter, permease protein [Desulfovibrio sp. 3_1_syn3] gi|302862373|gb|EFL85306.1| ABC transporter, permease protein [Desulfovibrio sp. 3_1_syn3] Length = 375 Score = 239 bits (611), Expect = 5e-61, Method: Composition-based stats. Identities = 81/373 (21%), Positives = 153/373 (41%), Gaps = 8/373 (2%) Query: 2 SENGITVFR-FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 S G G W E D +A + ++ + + DT ++ Sbjct: 10 SAQGPLWLVSVGGRWNMEEPWPEEADAALAGIADQRVRELRLEANGLGRWDTSLLVFLVQ 69 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 ++ + ++ L + + + S +G + Sbjct: 70 MVKAARARKLDVDLA-----LPEGLERLLHMAFAVPAQEGAARKKSDATFLSGLGDAALS 124 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 G V + K + + MY GV +P++ + S + G Sbjct: 125 LPPTVGDFLSFCGEVTLSIWRLFLGRSKMRS--QDFVAAMYECGVQALPIISVTSMLFGL 182 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 ++A GA QL+QFGA+I+ L+ I LR +G ++ V+++GR G+A A IG+M++NEE Sbjct: 183 ILAFVGAVQLTQFGAQIYVAGLVGIGMLRVMGAVMVGVVMSGRVGAAYAALIGTMQVNEE 242 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +DA+ T+G+ V L+ PR+ AL +PLLT+ A+ ++G +V D+ + + Sbjct: 243 VDALATLGISPVDFLVLPRVLALTAMVPLLTLYADLMGVLGGYLVGVMMLDLNPMEYINA 302 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 ++ GL+ I + +G G + ++G+ TT VV SI +I+ Sbjct: 303 TTQMVPFKHVLIGLVYGTVFGVVIAVAGCYQGMRCGRSAQAVGQATTTAVVHSIVGIIVA 362 Query: 361 DSLFAIFYFAIGI 373 + + +G+ Sbjct: 363 TAAITVICNVLGV 375 >gi|291532196|emb|CBL05309.1| conserved hypothetical integral membrane protein [Megamonas hypermegale ART12/1] Length = 256 Score = 239 bits (610), Expect = 6e-61, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 127/263 (48%), Gaps = 9/263 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 IG+ ++ + ++G I+ ++ + + +QM ++GV Sbjct: 2 IIRFFEKIGRFVIGHLETLGQFTILIGNTIAQL--------RYPPRMRHVFQQMSHLGVD 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +P++ L TG VI Q A + + GA+ +++I RE+G +L V+ AGR G+ Sbjct: 54 TLPIITLTMLFTGMVITLQTATEFIRLGAQSTVGGIVTIAVGRELGPVLAGVVTAGRVGA 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 AI AEI +MK+ E+IDA++ M + + L+ PR+ A + LP+L + + IG +V Sbjct: 114 AITAEISTMKVTEQIDALKVMATNPIGYLVVPRLIACMFMLPILVVFGDVIGSIGGWMVA 173 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 +YYDI ++ + + +I GL+K+ I IV G + +GK Sbjct: 174 -EYYDINIYMYLHSIDTFVDVHDITGGLLKSIVFGAIIAIVGCYYGLNAQNGAEGVGKAT 232 Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369 T VV SI ++ + L ++ + Sbjct: 233 TRSVVISIIVIFFSNCLLSMLLY 255 >gi|149907972|ref|ZP_01896640.1| membrane protein, putative [Moritella sp. PE36] gi|149808978|gb|EDM68909.1| membrane protein, putative [Moritella sp. PE36] Length = 262 Score = 239 bits (610), Expect = 6e-61, Method: Composition-based stats. Identities = 81/266 (30%), Positives = 140/266 (52%), Gaps = 12/266 (4%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G+ + + L I + + ++++ +I Q+Y++G + Sbjct: 4 NPFAQLGRATLALLQGFGKATLFL---IHSVVHMFSRPWQWR----RVIEQLYFIGAKSI 56 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 V+ + TG V+ QG + LS+FG+ +++ +RE+G +LTA+MI GR+GSA+ Sbjct: 57 IVICVTGLFTGMVLGLQGYYTLSKFGSTGLLGSAVALTLIRELGPVLTAIMIIGRAGSAM 116 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG M+I+E+IDA++TM +D +R L+SPRI A +IS PLLT + + I G + + Sbjct: 117 TAEIGIMRISEQIDALKTMTIDPIRFLVSPRIIAALISFPLLTAIFDTVGIFGGYLTGSQ 176 Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG-----VHSNSLG 343 I A +F R S+ +A++ G IK+ F + + V G+ + +G Sbjct: 177 LLGINPATYFYRVESSVIMADVAGGFIKSIFFSITVITVCCYHGYYTHIRRDNFGAKGVG 236 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYF 369 TT VVQ+ +V++ID + F Sbjct: 237 LSTTTAVVQASILVLVIDYILTTFLL 262 >gi|332038535|gb|EGI74978.1| uncharacterized ABC transporter, permease component YrbE [Pseudoalteromonas haloplanktis ANT/505] Length = 259 Score = 239 bits (610), Expect = 6e-61, Method: Composition-based stats. Identities = 78/251 (31%), Positives = 129/251 (51%), Gaps = 1/251 (0%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 K + + + LG A FK L+RQ+Y VG + ++++ G Sbjct: 7 KLGHKTLGRFAALGRSAYMLFSALAHVPNFKKGTPLLVRQLYMVGSQSLLIIMVSGLFIG 66 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A QG L +GAE L+++ LRE+G ++TA++ AGR+GSA+ AEIG MK E Sbjct: 67 MVLALQGYTVLVGYGAEDSLGPLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATE 126 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++ ++ M +D ++ +I+PR WA IS+PLL ++ + AIIGA +V + + F+S Sbjct: 127 QLSSLEMMAIDPLKRIIAPRFWAGFISMPLLALIFSAVAIIGAHLVGVDWLGVDTGSFWS 186 Query: 300 RFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 S + +I G+IK+ A + +A+ +G+ S + K T VV S V+ Sbjct: 187 IMQSQVSFQQDILNGIIKSFVFAIVVTWIALYKGYDCVPTSEGISKATTETVVHSSLAVL 246 Query: 359 IIDSLFAIFYF 369 D + F Sbjct: 247 GFDFILTAVMF 257 >gi|260772164|ref|ZP_05881081.1| uncharacterized ABC transporter permease component YrbE [Vibrio metschnikovii CIP 69.14] gi|260613031|gb|EEX38233.1| uncharacterized ABC transporter permease component YrbE [Vibrio metschnikovii CIP 69.14] Length = 263 Score = 239 bits (610), Expect = 6e-61, Method: Composition-based stats. Identities = 74/256 (28%), Positives = 125/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + I +F G + L L++Q+Y VGV + ++I+ Sbjct: 7 QAISRFGRRCLGVGESFGRASLMLFGALVGRPRPIQHLPLLMKQLYSVGVQSLAIIIVSG 66 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V++ QG L FGAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 67 LFIGMVLSLQGYVILVDFGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 126 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D ++ +I+PR+WA +IS+PLL ++ I G +V + I Sbjct: 127 KATEQISSLEMMAVDPLKRIIAPRLWAGLISMPLLAMIFMAVGIWGGHLVGVDWKGIDQG 186 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S S+ L +I +IK A + +A+ G+ S + + T VV S Sbjct: 187 SFWSVMQSSVELGRDIGNSVIKCVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 246 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 247 LAVLALDFVLTALMFG 262 >gi|114563133|ref|YP_750646.1| hypothetical protein Sfri_1962 [Shewanella frigidimarina NCIMB 400] gi|114334426|gb|ABI71808.1| protein of unknown function DUF140 [Shewanella frigidimarina NCIMB 400] Length = 370 Score = 239 bits (610), Expect = 6e-61, Method: Composition-based stats. Identities = 88/371 (23%), Positives = 174/371 (46%), Gaps = 11/371 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + + AG+W+ + + + D+ + + QS + I + ++ D+ A ++ Sbjct: 11 HDDNCLLNLAGDWQLGQ-APLGADICAELPSNCQSITLI--TTELSHWDSSLAIALLQLS 67 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + + + T + +P + L + + ++K Sbjct: 68 R--WCEQQKISLDTQQTPQGLQQLLQLATDVPVYQPTND---GAIGGLWPTLRRSLIKQG 122 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 +G G + + + +I + G G+ +V LIS + G ++ Sbjct: 123 LQVHDGLVFVGDCTLVLGRWLGGKARTRR--SDIIFFIEQAGPKGLAIVTLISLLVGMIL 180 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A G+ QL Q GA+++ +L++I +RE+G L+T V++AGR+G+A A++G+M++NEEID Sbjct: 181 AYLGSVQLRQLGAQVYVANLVAIGMVREMGALMTGVIMAGRTGAAYAAQLGTMQVNEEID 240 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R MG+ + L+ PR+ ALI +PL+ I ++ ++G ++V + + + + Sbjct: 241 ALRVMGIPTMEFLVLPRLLALIFIMPLMCIYSDVIGMLGGALVANGM-GVSYTQYILQTQ 299 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 +I TGLIK+ I I + G G SN++G T VV++I +++ D+ Sbjct: 300 VAIDWVDISTGLIKSLIFGFLIAIAGCQAGLLCGRDSNAVGLATTHAVVKAIVFLVVADA 359 Query: 363 LFAIFYFAIGI 373 I Y +GI Sbjct: 360 ALNILYDKLGI 370 >gi|254480123|ref|ZP_05093371.1| conserved domain protein [marine gamma proteobacterium HTCC2148] gi|214039685|gb|EEB80344.1| conserved domain protein [marine gamma proteobacterium HTCC2148] Length = 376 Score = 239 bits (610), Expect = 7e-61, Method: Composition-based stats. Identities = 99/375 (26%), Positives = 177/375 (47%), Gaps = 14/375 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + + V G+W + + + I + +VD S + D++ ++ Sbjct: 13 EDREVAVLLLTGDWVQGQSHRDFHVLKDDL-LGITASELVVDGSQLGLWDSVLMAFLLQS 71 Query: 62 MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + + + + IE+L + + + ++ + S +L + + Sbjct: 72 FNQCREDNIVFRTRALPDGIERLLDVATAVPTHVPPSAPNKQWYESFSPGSLVLELWEST 131 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 V+ + L + G+ F+ F Y G ++ L S + Sbjct: 132 VESLAFIGELGIALWRL--ALGKANTRFSDFRTF-------CYQAGPDAFAIISLTSVLV 182 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G ++A GA QL QFGAE++ DL+ I LRE+GVL+ A+++AGR+G+A A++G+M+ N Sbjct: 183 GMILAYLGAVQLQQFGAEVYVADLVVIGMLREMGVLMAAIVMAGRTGAAYAAQLGTMQAN 242 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDAIRTMG+ + L+ PR+ AL++++PLLT+ AN IIG IV P ++ Sbjct: 243 EEIDAIRTMGISPMEFLVVPRMLALVVAMPLLTLYANLLGIIGGGIVSGGLGVTPL-MYI 301 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 S + L+++ GLIK+ I + + G G S ++G+ T VV +I +I Sbjct: 302 SEGETALQLSHLSVGLIKSVVFGVLIAVAGCRSGINSGRSSAAVGQAATQAVVTAIVYLI 361 Query: 359 IIDSLFAIFYFAIGI 373 + D+ I + +GI Sbjct: 362 VADAAINILFQQVGI 376 >gi|288962766|ref|YP_003453060.1| ABC transport system permease protein [Azospirillum sp. B510] gi|288915032|dbj|BAI76516.1| ABC transport system permease protein [Azospirillum sp. B510] Length = 258 Score = 238 bits (609), Expect = 7e-61, Method: Composition-based stats. Identities = 67/262 (25%), Positives = 128/262 (48%), Gaps = 7/262 (2%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 G+ + F+ + A G +S+ + + ++RQM +G + Sbjct: 2 GFLAATGRAFLIFLEATGRLALFTGSALSHC-------VRPPLYPRQILRQMIDIGYYSL 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 PVV L + TG V+A Q S+F AE ++ + RE+G +L +M+AGR G+A+ Sbjct: 55 PVVGLTALFTGMVLALQSYSGFSRFQAEGAIATVVVLSITRELGPVLAGLMVAGRIGAAM 114 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG+M++ E+IDA+ T+ + + L++PR+ A + +PLL ++A+ + G +V Sbjct: 115 AAEIGTMRVTEQIDALSTLSTNPYKYLVAPRLIAGLTMVPLLVVVADIIGVFGGFLVGVY 174 Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 D A + +R ++ +GL+KA I ++ G+ + +G T Sbjct: 175 RLDFNAASYINRTWEFLQPVDVISGLVKAAIFGFLIALMGCYHGYHSKGGAQGVGAATTN 234 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + ++++ + L +F+ Sbjct: 235 AVVSASIMILVWNYLITGLFFS 256 >gi|51473253|ref|YP_067010.1| ABC transporter permease protein [Rickettsia typhi str. Wilmington] gi|81390296|sp|Q68XW4|Y041_RICTY RecName: Full=Probable ABC transporter permease protein RT0041 gi|51459565|gb|AAU03528.1| ABC transporter permease protein [Rickettsia typhi str. Wilmington] Length = 259 Score = 238 bits (609), Expect = 8e-61, Method: Composition-based stats. Identities = 71/265 (26%), Positives = 135/265 (50%), Gaps = 7/265 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N+ +GK +KF A + +S K +L ++RQ+ ++G Sbjct: 2 LLNIANLVGKHTIKFAQSVGIFALF-------SFIAISSIIKPPLYLSLIMRQLLFIGFH 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PVV + +F +GAV+A Q S+F AE ++ + RE+G +L +++AGR G+ Sbjct: 55 SLPVVAMTTFFSGAVLALQSYTGFSRFSAENSIATVVVLSLTRELGPVLAGLIVAGRVGA 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 +I AEI +MK+ E++DA+ T+ D ++ L+ PR+ A II++P L ++ + ++G +V Sbjct: 115 SIAAEIATMKVTEQVDALYTLSTDPIKYLVCPRVIAAIITMPCLVLIGDVIGVMGGYLVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + + + L ++ +GL+KA I I++ G+ G + +G+ Sbjct: 175 IYKLNFNSTAYLTSTFQYLELIDVISGLVKATVFGFIISIISCYSGYYSGKGAKGVGRAT 234 Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371 T+ VV S +++I + L F + Sbjct: 235 TSAVVNSSILILISNYLITELLFKV 259 >gi|327479601|gb|AEA82911.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas stutzeri DSM 4166] Length = 265 Score = 238 bits (608), Expect = 9e-61, Method: Composition-based stats. Identities = 70/255 (27%), Positives = 131/255 (51%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 +I LG + L++Q+Y VGV + +V++ Sbjct: 9 RIALLGRAGLDVLAALGRSTIFLVHVLFGRSGLRNGFSLLVKQLYSVGVLSLAIVVVSGI 68 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG LS +G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+MK Sbjct: 69 FIGMVLALQGYNILSSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALAAEIGNMK 128 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ +G+D ++ +I+PR+WA ISLPLLT++ N I G ++V + + Sbjct: 129 STEQLSSLEMIGVDPLKYIIAPRLWAGFISLPLLTLIFNVVGIWGGAMVAVDWLGVYEGS 188 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F++ ++ +++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 189 FWANMQNSVDFHSDVLNGVIKSVVFALVVTWIAVFQGYDCEPTSEGISRATTRTVVYASL 248 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 249 AVLGLDFILTALMFG 263 >gi|253828165|ref|ZP_04871050.1| inner membrane protein yrbE [Helicobacter canadensis MIT 98-5491] gi|313142364|ref|ZP_07804557.1| ABC transporter [Helicobacter canadensis MIT 98-5491] gi|253511571|gb|EES90230.1| inner membrane protein yrbE [Helicobacter canadensis MIT 98-5491] gi|313131395|gb|EFR49012.1| ABC transporter [Helicobacter canadensis MIT 98-5491] Length = 371 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 106/375 (28%), Positives = 183/375 (48%), Gaps = 18/375 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINK-SIQSDSAIVDLSAITEIDTIGAELIMYF 61 +N I + + +G W +I +++ ++ + + ++L+ ++D G E++ + Sbjct: 9 DNDIYILKLSGLWDY----KIPKSLLLRLDSIKLTNVKIKIELAENFDLDFCGGEILERW 64 Query: 62 MEKYHGK-IKLQGV---STHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 + K I L+ + +Q+F +++ + P + F LH+ + Sbjct: 65 ILALESKNIVLENALKNHSKSQQIFQILAT-------RKNPLKQDMVQDFIKLHWDSFQI 117 Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I F DS G ++ + L + + + V + +V L F+ Sbjct: 118 IKGFFKDSLMAIGFFGEILYAWFSSLLQPKNIR--LKATLYCIQESLVKAIGIVALACFL 175 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G VIA QG+ QL QFGA I +++ S+L LRE+ ++TA++IAGRS SA AEIG M+ Sbjct: 176 IGIVIAYQGSIQLGQFGASILIVEMSSMLTLREMAPIITAIIIAGRSASAFSAEIGMMRA 235 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 +EIDA+R MG D + L+ PR+ AL + LPL+ +A+ ++GA +V I F Sbjct: 236 TQEIDAMRVMGFDPITFLVLPRMLALCLVLPLVVFIADLFGLLGAMLVCQLQLGIGTEQF 295 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 RF + + + G+ KAPF I V GF V + S+G T VV+SI +V Sbjct: 296 VERFLQVVDMRHFWVGIAKAPFFGLIISFVGCFHGFIVAKDTRSIGVHTTKSVVESIFLV 355 Query: 358 IIIDSLFAIFYFAIG 372 I D+L ++ + +G Sbjct: 356 IAFDALCSVVFTEMG 370 >gi|119469173|ref|ZP_01612157.1| putative transport protein (ABC superfamily, membrane) [Alteromonadales bacterium TW-7] gi|119447425|gb|EAW28693.1| putative transport protein (ABC superfamily, membrane) [Alteromonadales bacterium TW-7] Length = 259 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 78/251 (31%), Positives = 129/251 (51%), Gaps = 1/251 (0%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 K + + + LG A FK L+RQ+Y VG + ++++ G Sbjct: 7 KLGHKTLGRFAALGRSAYMLFSALAHVPNFKKGTPLLVRQLYMVGSQSLLIIMVSGLFIG 66 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A QG L +GAE L+++ LRE+G ++TA++ AGR+GSA+ AEIG MK E Sbjct: 67 MVLALQGYTVLVGYGAEDSLGPLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATE 126 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++ ++ M +D ++ +I+PR WA IS+PLL I+ + AIIGA +V + + F+S Sbjct: 127 QLSSLEMMAIDPLKRIIAPRFWAGFISMPLLAIIFSAVAIIGAHLVGVDWLGVDTGSFWS 186 Query: 300 RFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 S + ++ G+IK+ A + +A+ +G+ S + K T VV S V+ Sbjct: 187 IMQSQVSFQADVLNGIIKSFVFAIVVTWIALYKGYDCVPTSEGISKATTETVVHSSLAVL 246 Query: 359 IIDSLFAIFYF 369 D + F Sbjct: 247 GFDFILTAVMF 257 >gi|146281424|ref|YP_001171577.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas stutzeri A1501] gi|145569629|gb|ABP78735.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas stutzeri A1501] Length = 265 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 70/255 (27%), Positives = 131/255 (51%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 +I LG + L++Q+Y VGV + +V++ Sbjct: 9 RIALLGRAGLDVLAALGRSTIFLVHALFGRSGLRNGFSLLVKQLYSVGVLSLAIVVVSGI 68 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG LS +G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+MK Sbjct: 69 FIGMVLALQGYNILSSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALAAEIGNMK 128 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ +G+D ++ +I+PR+WA ISLPLLT++ N I G ++V + + Sbjct: 129 STEQLSSLEMIGVDPLKYIIAPRLWAGFISLPLLTLIFNVVGIWGGAMVAVDWLGVYEGS 188 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F++ ++ +++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 189 FWANMQNSVDFHSDVLNGVIKSVVFALVVTWIAVFQGYDCEPTSEGISRATTRTVVYASL 248 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 249 AVLGLDFILTALMFG 263 >gi|78357028|ref|YP_388477.1| ABC transporter permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219433|gb|ABB38782.1| ABC transporter permease protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 373 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 91/372 (24%), Positives = 166/372 (44%), Gaps = 13/372 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G V F G W + + + + + + + +T D+ +E Sbjct: 12 GRCVIVFQGRWTLHDTVPSVGKLALRLESDCRGGAVSFSCAGLTAWDSRFLTFCRSVLET 71 Query: 65 YHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 G+ G+ + +L SL + ++ + L +G+ + Sbjct: 72 LEGRGIAYDTSGLPDGVLRLLSLAAQVPEREGAAVSRKSP--------LSARMGEALHAA 123 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + S +G V + C F+ + + G +P+V LIS + G + Sbjct: 124 FAGTISVMEFIGDVTLSVLRMCIGRAVFR--WSDTFALLRFCGAQSLPIVSLISMLAGLI 181 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 A GA QL FGAEI+ L+ I LR +G ++TA++++GR G+A AE+G+M++NEEI Sbjct: 182 FAFVGAVQLKMFGAEIYVASLVGIAMLRVMGAVMTAIIVSGRVGAAFAAELGTMQVNEEI 241 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA T G+ + L+ PR+ AL++ +PLL + AN I+G + V W DI +F+ Sbjct: 242 DAFSTFGISPLDFLVLPRMLALVLMMPLLCVYANLMGIVGGAAVGWLMLDINLHQYFNMT 301 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 T +L + G+ + + + + G G ++++GK T+ VV SI +++ Sbjct: 302 WQTVSLTHFGVGIAHSVVFGFVVAVCSCYMGIHCGRSASAVGKATTSAVVSSIVSIVVAT 361 Query: 362 SLFAIFYFAIGI 373 ++ +GI Sbjct: 362 AVITFLCNILGI 373 >gi|15223672|ref|NP_173410.1| TGD1 (TRIGALACTOSYLDIACYLGLYCEROL 1); lipid transporter [Arabidopsis thaliana] gi|42571555|ref|NP_973868.1| TGD1 (TRIGALACTOSYLDIACYLGLYCEROL 1); lipid transporter [Arabidopsis thaliana] gi|42571557|ref|NP_973869.1| TGD1 (TRIGALACTOSYLDIACYLGLYCEROL 1); lipid transporter [Arabidopsis thaliana] gi|75153743|sp|Q8L4R0|TGD1_ARATH RecName: Full=Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic; AltName: Full=ABC transporter I family member 14; Short=ABC transporter ABCI.14; Short=AtABCI14; Flags: Precursor gi|20465620|gb|AAM20141.1| unknown protein [Arabidopsis thaliana] gi|21281062|gb|AAM45069.1| unknown protein [Arabidopsis thaliana] gi|45680900|gb|AAS75319.1| permease-like protein [Arabidopsis thaliana] gi|222424205|dbj|BAH20061.1| AT1G19800 [Arabidopsis thaliana] gi|332191778|gb|AEE29899.1| trigalactosyldiacylglycerol 1 [Arabidopsis thaliana] gi|332191779|gb|AEE29900.1| trigalactosyldiacylglycerol 1 [Arabidopsis thaliana] gi|332191780|gb|AEE29901.1| trigalactosyldiacylglycerol 1 [Arabidopsis thaliana] Length = 350 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 55/232 (23%), Positives = 113/232 (48%) Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198 G+ K K + ++Q+ G + V +L S G Q + ++ G Sbjct: 109 AGQVVLRILKGKIHWRNTLQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFTRLGLNRS 168 Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258 ++++ RE+ ++T++++AGR GSA AE+G+M+++E+ D +R +G D + LI+P Sbjct: 169 IGGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADPIDYLITP 228 Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318 R+ A ++LP LT++ + ++++ Y I + H +I + +IK+ Sbjct: 229 RVIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMDSAHRALRPWDIVSAMIKSQ 288 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 I +++ G + +G+ T+ VV S+ + I D + + F+F Sbjct: 289 VFGAIISVISCSWGVTTTGGAKGVGESTTSAVVMSLVGIFIADFVLSSFFFQ 340 >gi|88861156|ref|ZP_01135790.1| putative transport protein (ABC superfamily, membrane) [Pseudoalteromonas tunicata D2] gi|88816878|gb|EAR26699.1| putative transport protein (ABC superfamily, membrane) [Pseudoalteromonas tunicata D2] Length = 259 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 76/252 (30%), Positives = 134/252 (53%), Gaps = 1/252 (0%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + ++ ++ +G + S F+ LI+Q+Y VG + ++++ G Sbjct: 7 QLGKETLNRFASVGRALMMLIGAIFSVPNFRKGTPLLIKQLYMVGFLSLMIIVVSGLFIG 66 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A QG L +GAE L+++ LRE+G ++TA++ AGR+GSA+ AEIG MK E Sbjct: 67 MVLALQGYTVLVDYGAEDSLGPLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATE 126 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++ ++ M +D ++ +I+PR WA IIS+PLL ++ + AI+GA +V + I F+S Sbjct: 127 QLSSLEMMAIDPLKRIIAPRFWAGIISMPLLALIFSAVAILGAHLVGVDWLGIDSGSFWS 186 Query: 300 RFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + + +I G+IK+ A + +A+ +G+ S + K T VVQS V+ Sbjct: 187 VMQAQVSFEKDILNGMIKSLVFAFVVTWIALYKGYFCIPTSEGISKATTETVVQSSLAVL 246 Query: 359 IIDSLFAIFYFA 370 D + F+ Sbjct: 247 GFDFVLTAVMFS 258 >gi|83591748|ref|YP_425500.1| hypothetical protein Rru_A0408 [Rhodospirillum rubrum ATCC 11170] gi|83574662|gb|ABC21213.1| Protein of unknown function DUF140 [Rhodospirillum rubrum ATCC 11170] Length = 257 Score = 237 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 63/262 (24%), Positives = 124/262 (47%), Gaps = 7/262 (2%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N IG+ + F+ + G +S+ + F + RQ+ +G + Sbjct: 2 NFLAIIGRVFLTFLRHVGRLSVFTGTALSHC-------VRPPFFPRLIGRQLVEIGYYSL 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 PVV L + TG V++ Q ++F AE + ++ + RE+G +L +M+AGR G+A+ Sbjct: 55 PVVGLTAIFTGMVLSLQSHSGFARFSAEGATATVVVLSMTRELGPVLAGLMVAGRIGAAM 114 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG+MK+ E+IDA+ T+ + + L+ PR+ A + LP+L + A+ + G ++ Sbjct: 115 AAEIGTMKVTEQIDALTTLATNPYKYLVVPRLIAGVTMLPILVLTADIIGVFGGYLIGVY 174 Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + + + ++ +GL+KA I ++ G + +G T Sbjct: 175 KLGFNPSNYIASTWEFLEPMDVISGLVKASVFGFIIALMGCYHGSQSKGGAQGVGAATTN 234 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + ++++ + + +FA Sbjct: 235 AVVSASILILVCNYMITELFFA 256 >gi|52425767|ref|YP_088904.1| hypothetical protein MS1712 [Mannheimia succiniciproducens MBEL55E] gi|52307819|gb|AAU38319.1| unknown [Mannheimia succiniciproducens MBEL55E] Length = 260 Score = 237 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 74/266 (27%), Positives = 134/266 (50%), Gaps = 7/266 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 +L +G+ ++ + +L G + K LI+Q+Y +GV Sbjct: 2 MVDLISALGRNVINSVKALGRAGFML------FGSLVGKP-QIKKHFPLLIKQLYVLGVQ 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + +++L F G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GS Sbjct: 55 SLLIILLSGFFIGMVLGLQGYVILVDFAAEANVGQLVALSLLRELGPVVTALLFAGRAGS 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ ++ M +D +R +I+PR WA +I++P+LT+L IIG ++ Sbjct: 115 ALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPVLTVLFTAVGIIGGHLIG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 ++ I F+S + +++ G IK+ A + +A+ G+ S + + Sbjct: 175 VEWKGIDSGSFWSVMQNAVRTLDLWDGFIKSLVFAFTVTWIALFNGYDCIPTSEGISQAT 234 Query: 347 TTCVVQSISIVIIIDSLFAIFYFAIG 372 T VV + +V+ +D + F G Sbjct: 235 TRTVVNASLLVLGLDFVLTAIMFGAG 260 >gi|121727423|ref|ZP_01680551.1| conserved hypothetical protein [Vibrio cholerae V52] gi|229507423|ref|ZP_04396928.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae BX 330286] gi|229509652|ref|ZP_04399133.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae B33] gi|229516777|ref|ZP_04406223.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae RC9] gi|229606930|ref|YP_002877578.1| ABC transporter permease [Vibrio cholerae MJ-1236] gi|254851063|ref|ZP_05240413.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255744503|ref|ZP_05418455.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholera CIRS 101] gi|262154673|ref|ZP_06028799.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae INDRE 91/1] gi|262167549|ref|ZP_06035254.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae RC27] gi|262191035|ref|ZP_06049244.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae CT 5369-93] gi|297581366|ref|ZP_06943289.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|298500651|ref|ZP_07010455.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|121630195|gb|EAX62595.1| conserved hypothetical protein [Vibrio cholerae V52] gi|229345840|gb|EEO10812.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae RC9] gi|229353126|gb|EEO18065.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae B33] gi|229354928|gb|EEO19849.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae BX 330286] gi|229369585|gb|ACQ60008.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae MJ-1236] gi|254846768|gb|EET25182.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255738028|gb|EET93421.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholera CIRS 101] gi|262024002|gb|EEY42698.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae RC27] gi|262030513|gb|EEY49151.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae INDRE 91/1] gi|262033098|gb|EEY51627.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae CT 5369-93] gi|297534204|gb|EFH73042.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297540820|gb|EFH76877.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|327485006|gb|AEA79413.1| Uncharacterized ABC transporter, permease component YrbE [Vibrio cholerae LMA3894-4] Length = 263 Score = 237 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 73/268 (27%), Positives = 129/268 (48%), Gaps = 8/268 (2%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 N +G++ + + +L G + F L L+RQ+Y + Sbjct: 2 LNDVMRWVSSVGQRTLAVSETFGRASLML------FGALVGRPQPIRHFPL-LVRQLYSI 54 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 GV + ++I+ G V++ QG L +GAE ++++ LRE+G ++TA++ AGR Sbjct: 55 GVQSLAIIIVSGLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGR 114 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 +GSA+ AEIG MK E++ ++ M +D ++ +I+PR WA +IS+PLL ++ I G Sbjct: 115 AGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQ 174 Query: 284 IVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 +V + I F+S ++ L +I IK A + +A+ G+ S + Sbjct: 175 LVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGI 234 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + T VV S V+ +D + F Sbjct: 235 SRATTRTVVHSSLAVLGLDFVLTALMFG 262 >gi|262170539|ref|ZP_06038217.1| uncharacterized ABC transporter permease component YrbE [Vibrio mimicus MB-451] gi|261891615|gb|EEY37601.1| uncharacterized ABC transporter permease component YrbE [Vibrio mimicus MB-451] Length = 263 Score = 237 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 73/268 (27%), Positives = 129/268 (48%), Gaps = 8/268 (2%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 N IG++ + + +L G + F L L+RQ+Y + Sbjct: 2 LNDVMRWVSSIGQRTLAVSETIGRASLML------FGALVGRPQPIRNFPL-LVRQLYSI 54 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 GV + ++++ G V++ QG L +GAE ++++ LRE+G ++TA++ AGR Sbjct: 55 GVQSLAIIMVSGLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGR 114 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 +GSA+ AEIG MK E++ ++ M +D ++ +I+PR WA +IS+PLL ++ I G Sbjct: 115 AGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQ 174 Query: 284 IVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 +V + I F+S ++ L +I IK A + +A+ G+ S + Sbjct: 175 LVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGI 234 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + T VV S V+ +D + F Sbjct: 235 SRATTRTVVHSSLAVLGLDFVLTALMFG 262 >gi|289547869|ref|YP_003472857.1| hypothetical protein Thal_0093 [Thermocrinis albus DSM 14484] gi|289181486|gb|ADC88730.1| protein of unknown function DUF140 [Thermocrinis albus DSM 14484] Length = 245 Score = 237 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 75/245 (30%), Positives = 123/245 (50%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G T ++ L ++Q+ Y+G VPVV++ S +G VIA Sbjct: 1 MLRVFEEVGKAALLTFLGIYFLFRNPPRLYHFVKQLAYLGAETVPVVVITSLFSGGVIAL 60 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q +F AE ++++ RE+G +LTA+M+ R GSA+ A IG+M+I E+IDA+ Sbjct: 61 QTYSTFHRFNAEFLIGAVVALSMFRELGPVLTALMVTARVGSAMTASIGTMRITEQIDAL 120 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG++ V L++PRI A ++ LPLLTI+++ + I+G V + + +F+ R Sbjct: 121 EVMGMNPVSYLVTPRIVAGVLGLPLLTIISDVAGILGGWFVAVGLFGVNNHLFWERMRDL 180 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + GL KA F + V+ GF + +G+ T+ VV S +V+I D Sbjct: 181 VEFYDFVGGLYKAVFFGLVVSAVSCYFGFYTKGGTEGVGRATTSSVVTSSMLVLISDYFL 240 Query: 365 AIFYF 369 F Sbjct: 241 TAIIF 245 >gi|262401810|ref|ZP_06078375.1| uncharacterized ABC transporter permease component YrbE [Vibrio sp. RC586] gi|262351782|gb|EEZ00913.1| uncharacterized ABC transporter permease component YrbE [Vibrio sp. RC586] Length = 263 Score = 237 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 72/268 (26%), Positives = 129/268 (48%), Gaps = 8/268 (2%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 N +G++ + + +L G + F L L+RQ+Y + Sbjct: 2 LNDVMRWVSSVGQRTLAVSETFGRASLML------FGALVGRPQPIRNFPL-LVRQLYSI 54 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 GV + ++++ G V++ QG L +GAE ++++ LRE+G ++TA++ AGR Sbjct: 55 GVQSLAIIMVSGLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGR 114 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 +GSA+ AEIG MK E++ ++ M +D ++ +I+PR WA +IS+PLL ++ I G Sbjct: 115 AGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQ 174 Query: 284 IVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 +V + I F+S ++ L +I IK A + +A+ G+ S + Sbjct: 175 LVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGI 234 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + T VV S V+ +D + F Sbjct: 235 SRATTRTVVHSSLAVLGLDFVLTALMFG 262 >gi|229527546|ref|ZP_04416938.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae 12129(1)] gi|229335178|gb|EEO00663.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae 12129(1)] Length = 263 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 74/268 (27%), Positives = 130/268 (48%), Gaps = 8/268 (2%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 N +G++ + + +L G + F L L+RQ+Y + Sbjct: 2 LNDVMRWVSSVGQRTLAVSETFGRASLML------FGALVGRPQPIRHFPL-LVRQLYSI 54 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 GV + ++I+ G V++ QG L +GAEI ++++ LRE+G ++TA++ AGR Sbjct: 55 GVQSLAIIIVSGLFIGMVLSLQGYVILVDYGAEISLGQMVALSLLRELGPVVTALLFAGR 114 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 +GSA+ AEIG MK E++ ++ M +D ++ +I+PR WA +IS+PLL ++ I G Sbjct: 115 AGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQ 174 Query: 284 IVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 +V + I F+S ++ L +I IK A + +A+ G+ S + Sbjct: 175 LVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGI 234 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + T VV S V+ +D + F Sbjct: 235 SRATTRTVVHSSLAVLGLDFVLTALMFG 262 >gi|229521585|ref|ZP_04411003.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae TM 11079-80] gi|229341179|gb|EEO06183.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae TM 11079-80] Length = 263 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 72/268 (26%), Positives = 129/268 (48%), Gaps = 8/268 (2%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 N +G++ + + +L G + F L L+RQ+Y + Sbjct: 2 LNDVMRWVSSVGQRTLAVSETFGRASLML------FGALVGRPQPIRHFPL-LVRQLYSI 54 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 GV + ++I+ G V++ QG L +GAE ++++ LRE+G ++TA++ AGR Sbjct: 55 GVQSLAIIIVSGLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGR 114 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 +GSA+ AEIG MK E++ ++ M +D ++ +I+PR WA +IS+PLL ++ + G Sbjct: 115 AGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGVWGGQ 174 Query: 284 IVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 +V + I F+S ++ L +I IK A + +A+ G+ S + Sbjct: 175 LVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGI 234 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + T VV S V+ +D + F Sbjct: 235 SRATTRTVVHSSLAVLGLDFVLTALMFG 262 >gi|74316265|ref|YP_314005.1| ABC transporter permease [Thiobacillus denitrificans ATCC 25259] gi|74055760|gb|AAZ96200.1| ABC transport system permease protein [Thiobacillus denitrificans ATCC 25259] Length = 364 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 94/345 (27%), Positives = 170/345 (49%), Gaps = 11/345 (3%) Query: 31 INKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK--LQGVSTHIEQLFSLISFT 88 + ++D + +T +DT GA L++ + L+ + L++ Sbjct: 29 LPDLSGKRVRVIDGAGVTHLDTNGAWLLLAAAQPKADAPAPDLRDFQPRHLSMLRLVAQH 88 Query: 89 HRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYK 148 P++ + + G+ + + +G + Sbjct: 89 RAATPPLPAPRQ-------EGVLALTGRGALTVWSHLVGLLDFVGRLALELAGLVGQPGL 141 Query: 149 FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL 208 ++ L Q+ V V +P+V + F+ G V A Q QFGA IF +D + + L Sbjct: 142 WR--WRELAAQVRDVFVGAIPIVSGMMFLLGVVFAYLLGDQARQFGANIFVVDGLLLAVL 199 Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268 REI ++ AV++AGR+G+AI A++G+MK+ EEIDAI T+GL + +L+ PR+ ALI+++P Sbjct: 200 REISPVIVAVLVAGRTGAAITAQLGTMKVAEEIDAIATLGLSPLAVLVIPRVLALIVAMP 259 Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328 LL + + + ++G +V+ + I +F R + L + GL KAP A I +++ Sbjct: 260 LLVFIGDIAGLVGGMLVVQQQLAISPPIFLDRLYDVILLKTLMVGLGKAPVFALFIALIS 319 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + G AV + S+G T+ VVQS+ VII++++FA+ + +GI Sbjct: 320 CRMGLAVSRDARSVGVNTTSTVVQSLVAVIILNAVFAVAFVRLGI 364 >gi|71282011|ref|YP_271183.1| hypothetical protein CPS_4535 [Colwellia psychrerythraea 34H] gi|71147751|gb|AAZ28224.1| putative membrane protein [Colwellia psychrerythraea 34H] Length = 258 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 72/255 (28%), Positives = 129/255 (50%), Gaps = 1/255 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 ++I + + LG + + L++Q+Y VGV + ++++ Sbjct: 2 QQIQFLGKQTLNMISGLGRAVILLISALMHVPNIRKGTPLLMQQLYSVGVLSLLIIVVSG 61 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L +GAE ++++ LRE+G ++ A++ AGR+GSA+ AEIG M Sbjct: 62 TFIGMVLALQGYTILVGYGAEASLGPMVALSLLRELGPVVAALLFAGRAGSALTAEIGLM 121 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +I+PR WA ISLPLL + + I+GA +V + + Sbjct: 122 KATEQLSSLEMMAIDPLRRVIAPRFWAGFISLPLLAAIFSMVGILGAHVVGVDWLGVDGG 181 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S +I G+IK+ A + +A+ +G+ S + + T+ VVQS Sbjct: 182 TFWSVMQDQVDFQKDILNGIIKSIVFAFVVMWIAVYKGYDCEPTSEGISRATTSTVVQSS 241 Query: 355 SIVIIIDSLFAIFYF 369 +V+ +D + F Sbjct: 242 LLVLFLDFILTALMF 256 >gi|229513445|ref|ZP_04402909.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae TMA 21] gi|229524502|ref|ZP_04413907.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae bv. albensis VL426] gi|261211081|ref|ZP_05925370.1| uncharacterized ABC transporter permease component YrbE [Vibrio sp. RC341] gi|229338083|gb|EEO03100.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae bv. albensis VL426] gi|229349322|gb|EEO14278.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae TMA 21] gi|260839582|gb|EEX66193.1| uncharacterized ABC transporter permease component YrbE [Vibrio sp. RC341] Length = 263 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 73/268 (27%), Positives = 129/268 (48%), Gaps = 8/268 (2%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 N +G++ + + +L G + F L L+RQ+Y + Sbjct: 2 LNDVMRWVSSVGQRTLAVSETFGRASLML------FGALVGRPQPVRHFPL-LVRQLYSI 54 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 GV + ++I+ G V++ QG L +GAE ++++ LRE+G ++TA++ AGR Sbjct: 55 GVQSLAIIIVSGLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGR 114 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 +GSA+ AEIG MK E++ ++ M +D ++ +I+PR WA +IS+PLL ++ I G Sbjct: 115 AGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQ 174 Query: 284 IVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 +V + I F+S ++ L +I IK A + +A+ G+ S + Sbjct: 175 LVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGI 234 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + T VV S V+ +D + F Sbjct: 235 SRATTRTVVHSSLAVLGLDFVLTALMFG 262 >gi|22124065|ref|NP_667488.1| hypothetical protein y0145 [Yersinia pestis KIM 10] gi|45443560|ref|NP_995099.1| hypothetical protein YP_3829 [Yersinia pestis biovar Microtus str. 91001] gi|51597810|ref|YP_072001.1| ABC transporter, permease subunit, toluene tolerance protein [Yersinia pseudotuberculosis IP 32953] gi|108809720|ref|YP_653636.1| hypothetical protein YPA_3729 [Yersinia pestis Antiqua] gi|108813616|ref|YP_649383.1| hypothetical protein YPN_3456 [Yersinia pestis Nepal516] gi|145597639|ref|YP_001161715.1| hypothetical protein YPDSF_0323 [Yersinia pestis Pestoides F] gi|153950379|ref|YP_001399442.1| ABC transporter permease [Yersinia pseudotuberculosis IP 31758] gi|153997349|ref|ZP_02022449.1| putative membrane protein [Yersinia pestis CA88-4125] gi|162419182|ref|YP_001605691.1| hypothetical protein YpAngola_A1145 [Yersinia pestis Angola] gi|165928109|ref|ZP_02223941.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Orientalis str. F1991016] gi|165937439|ref|ZP_02226002.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Orientalis str. IP275] gi|166011407|ref|ZP_02232305.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Antiqua str. E1979001] gi|166212216|ref|ZP_02238251.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Antiqua str. B42003004] gi|167400680|ref|ZP_02306189.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420726|ref|ZP_02312479.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426982|ref|ZP_02318735.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470182|ref|ZP_02334886.1| putative ABC transporter, permease protein YrbE [Yersinia pestis FV-1] gi|170022764|ref|YP_001719269.1| hypothetical protein YPK_0513 [Yersinia pseudotuberculosis YPIII] gi|186897002|ref|YP_001874114.1| hypothetical protein YPTS_3704 [Yersinia pseudotuberculosis PB1/+] gi|218930586|ref|YP_002348461.1| hypothetical protein YPO3574 [Yersinia pestis CO92] gi|229836870|ref|ZP_04457035.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Yersinia pestis Pestoides A] gi|229839230|ref|ZP_04459389.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229899795|ref|ZP_04514936.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229904110|ref|ZP_04519221.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Yersinia pestis Nepal516] gi|270488545|ref|ZP_06205619.1| conserved hypothetical protein [Yersinia pestis KIM D27] gi|294505304|ref|YP_003569366.1| hypothetical protein YPZ3_3195 [Yersinia pestis Z176003] gi|21956812|gb|AAM83739.1|AE013614_13 hypothetical protein y0145 [Yersinia pestis KIM 10] gi|45438429|gb|AAS63976.1| putative membrane protein [Yersinia pestis biovar Microtus str. 91001] gi|51591092|emb|CAH22756.1| ABC transporter, permease subunit, toluene tolerance protein [Yersinia pseudotuberculosis IP 32953] gi|108777264|gb|ABG19783.1| membrane protein [Yersinia pestis Nepal516] gi|108781633|gb|ABG15691.1| putative membrane protein [Yersinia pestis Antiqua] gi|115349197|emb|CAL22162.1| putative membrane protein [Yersinia pestis CO92] gi|145209335|gb|ABP38742.1| membrane protein [Yersinia pestis Pestoides F] gi|149288986|gb|EDM39066.1| putative membrane protein [Yersinia pestis CA88-4125] gi|152961874|gb|ABS49335.1| putative ABC transporter, permease protein YrbE [Yersinia pseudotuberculosis IP 31758] gi|162351997|gb|ABX85945.1| putative ABC transporter, permease protein YrbE [Yersinia pestis Angola] gi|165914544|gb|EDR33158.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Orientalis str. IP275] gi|165919883|gb|EDR37184.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Orientalis str. F1991016] gi|165989791|gb|EDR42092.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Antiqua str. E1979001] gi|166206962|gb|EDR51442.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Antiqua str. B42003004] gi|166961532|gb|EDR57553.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050048|gb|EDR61456.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054022|gb|EDR63850.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169749298|gb|ACA66816.1| protein of unknown function DUF140 [Yersinia pseudotuberculosis YPIII] gi|186700028|gb|ACC90657.1| protein of unknown function DUF140 [Yersinia pseudotuberculosis PB1/+] gi|229678228|gb|EEO74333.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Yersinia pestis Nepal516] gi|229687287|gb|EEO79362.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229695596|gb|EEO85643.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229705813|gb|EEO91822.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Yersinia pestis Pestoides A] gi|262363367|gb|ACY60088.1| hypothetical protein YPD4_3184 [Yersinia pestis D106004] gi|262367255|gb|ACY63812.1| hypothetical protein YPD8_3142 [Yersinia pestis D182038] gi|270337049|gb|EFA47826.1| conserved hypothetical protein [Yersinia pestis KIM D27] gi|294355763|gb|ADE66104.1| hypothetical protein YPZ3_3195 [Yersinia pestis Z176003] gi|320017116|gb|ADW00688.1| putative toluene transporter subunit: membrane component of ABC superfamily [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 260 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 71/256 (27%), Positives = 122/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K + + G + + LI+Q+Y VGV + ++++ Sbjct: 4 KSLASLGRRGINVCASFGRAGLMLFNALVGRPEPRKQWPLLIKQLYSVGVQSLLIIVVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++S+ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +++PR WA +IS+PLLT + I G S+V + I Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDSG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQNAVEWRTDLLNCLIKSLVFALTVTWIALFNGYDAVPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|117618508|ref|YP_858369.1| putative ABC transporter, permease protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559915|gb|ABK36863.1| putative ABC transporter, permease protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 259 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 72/255 (28%), Positives = 124/255 (48%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 ++ K +G A + L++Q+Y VGV V ++++ Sbjct: 5 QVSKLGRSGVRFISAIGRATIMLFHALAGKPAPRKHFPLLVQQLYVVGVQSVAIILVSGL 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V++ QG L FGAE L+S+ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 65 FIGMVLSLQGYNVLKDFGAEQSLGPLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMK 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +++PR WA +IS+PLL + + I G +V + + Sbjct: 125 ATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLAFMFSLIGIFGGKLVGVDWLGVDEGS 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ +I G IK+ A + +A+ G+ S + + T VV S Sbjct: 185 FWSAMQASVDWQDDIMQGAIKSLIFALVVTWIALFNGYDAKPTSAGISQATTRTVVHSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFILTAVMFG 259 >gi|304396326|ref|ZP_07378207.1| protein of unknown function DUF140 [Pantoea sp. aB] gi|304355835|gb|EFM20201.1| protein of unknown function DUF140 [Pantoea sp. aB] Length = 260 Score = 237 bits (605), Expect = 3e-60, Method: Composition-based stats. Identities = 71/256 (27%), Positives = 123/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K + F G F+ LI+Q+Y VGV + ++++ Sbjct: 4 KALASFGRQGIETCASFGRAGLMLFHALVGKPAFRRHTPLLIKQLYSVGVLSLLIIVVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ +GAE L+++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLVLNTYGAETSLGMLVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R ++SPR WA IS+PLLT++ I G ++V + I Sbjct: 124 KATEQLSSMEMMAVDPLRRVVSPRFWAGFISMPLLTMIFTAVGIAGGALVGVSWKGIDPG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + ++ +IK+ A + +A+ G+ S + + T VV + Sbjct: 184 FFWSAMQNAVDFRTDVVNCIIKSAVFAVTVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|146305912|ref|YP_001186377.1| hypothetical protein Pmen_0877 [Pseudomonas mendocina ymp] gi|145574113|gb|ABP83645.1| protein of unknown function DUF140 [Pseudomonas mendocina ymp] Length = 265 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 133/256 (51%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +++ F LG + + L LI+Q++ VGV + ++++ Sbjct: 8 ERLRLFGRAGIDVVATLGRSVLFLVGAVFGRSRAGKPLQLLIKQLFAVGVMSLAIIVVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L +G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+M Sbjct: 68 IFIGMVLALQGYNILVSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +I+PR+WA IS+PLL ++ + I G ++V + + Sbjct: 128 KSTEQLSSLEMIGVDPLKYIIAPRLWAGFISMPLLAMIFSVVGIWGGAMVAVDWLGVYEG 187 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ + ++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 188 SFWSNMQNSVSFYDDVLNGVIKSIVFAFVVTWIAVFQGYDCEPTSEGISRATTRTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|302341646|ref|YP_003806175.1| hypothetical protein Deba_0204 [Desulfarculus baarsii DSM 2075] gi|301638259|gb|ADK83581.1| protein of unknown function DUF140 [Desulfarculus baarsii DSM 2075] Length = 244 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 71/237 (29%), Positives = 122/237 (51%) Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G ++ + + + +++QM +VG + VV+L TG V A Q + S Sbjct: 8 GEIVLLLAQAALWLLRPPWRMRLVLKQMEFVGNKSINVVMLTGAFTGGVFALQSYYGFSL 67 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 FGAE +++ RE+G +LT++M+ GR+GSA+ AEIG+M++ E+IDA+ M ++ V Sbjct: 68 FGAESLVGSTVALALTRELGPVLTSLMVTGRAGSAMAAEIGTMRVTEQIDALYVMAVNPV 127 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 + L+ PR+ A +I LP LTI+ANF I+G V I VF ++ +I Sbjct: 128 QYLVLPRVLAAVIMLPALTIVANFIGILGGYAVGVGMLGINEGVFVAKIIEYVEFDDIGM 187 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 GL+K+ + ++ +GF + +G+ T VV + +++ D F Sbjct: 188 GLVKSAIFGLILSLIGCYKGFYTSGGAEGVGRATTEAVVLASVLILAADYALTAIMF 244 >gi|325273317|ref|ZP_08139589.1| hypothetical protein G1E_09861 [Pseudomonas sp. TJI-51] gi|324101550|gb|EGB99124.1| hypothetical protein G1E_09861 [Pseudomonas sp. TJI-51] Length = 265 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 70/256 (27%), Positives = 132/256 (51%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +++ + +LG G LIRQ+Y VGV + +V++ Sbjct: 8 ERVRLLGRSAIDVVAVLGRSCLFLFHALVGRGGIGGGFQLLIRQLYSVGVLSLAIVVVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+M Sbjct: 68 VFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +++PR+WA ISLPLL ++ + I G S V + + Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 187 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ ++ + ++ GLIK+ A +A+ +G+ S + + T VV + Sbjct: 188 SFWANMQNSVSFTDDVLNGLIKSLVFAFVATWIAVFQGYDCEPTSEGISRATTKTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|126663828|ref|ZP_01734823.1| ABC transporter, permease [Flavobacteria bacterium BAL38] gi|126624092|gb|EAZ94785.1| ABC transporter, permease [Flavobacteria bacterium BAL38] Length = 261 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 69/244 (28%), Positives = 123/244 (50%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 I + +G + G F +K +RQ Y++G + +V + F+ G Sbjct: 7 NIIKVIKAFLIEIGEISYFAGRFFKEFWKPPYEFKEFLRQCYFIGNRSLFLVGVTGFIIG 66 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V Q L +FGA + ++S+ +REIG ++TA++ AGR GS I AE+GSMK+ E Sbjct: 67 LVFTLQSRPTLQEFGAVSWMASMVSVSIIREIGPIITALICAGRIGSGIGAELGSMKVTE 126 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +IDA+ G + + L+ RI A + LPLL I + AI G+ +V ++ F ++F+ Sbjct: 127 QIDAMEVSGTNPFKYLVITRILATSLMLPLLVIFGDVLAIYGSYLVENVKDNVSFQLYFN 186 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 + + +++ +K F AIG++ +G+ + +GK VV + ++ + Sbjct: 187 QVFNILEFSDLIPATLKTFFFGFAIGLIGCYKGYYCKKGTAGVGKAANEAVVYTSMLLFV 246 Query: 360 IDSL 363 ID + Sbjct: 247 IDFI 250 >gi|330807561|ref|YP_004352023.1| putative ABC transporter, membrane protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375669|gb|AEA67019.1| putative ABC transporter, membrane protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 265 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 68/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +++ F +LG G L++Q++ VGV + ++++ Sbjct: 8 ERVRLFGRSGIDVVAVLGRSSLFLMHALLGRNSTGGGFGLLVKQLHSVGVMSLVIIVVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG LS +G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+M Sbjct: 68 IFIGMVLALQGFNILSSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +I+PR+WA ISLP+L I+ + I G S V + + Sbjct: 128 KSTEQLSSLEMIGVDPLKYIIAPRLWAGFISLPVLAIIFSVVGIWGGSWVAVDWLGVYEG 187 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 ++S ++ ++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 188 SYWSNMQNSVDFLDDVLNGVIKSAVFAFVVTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|144899037|emb|CAM75901.1| ABC transporter permease protein [Magnetospirillum gryphiswaldense MSR-1] Length = 257 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 63/262 (24%), Positives = 124/262 (47%), Gaps = 7/262 (2%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 + IG+ + F++ + G +S+ + + +R M +G + Sbjct: 2 DFVAAIGRIFLAFLSHVGRLSAFAGTALSHV-------VRPPFYPRLTLRAMVEIGYYSL 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 PVV L + TG V+A Q S+F AE ++ + RE+ +L +M+AGR G+++ Sbjct: 55 PVVGLTAVFTGMVLALQSYSGFSRFAAESAVATVVVLSVTRELAPVLAGLMVAGRIGASM 114 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG+M++ E+IDA+ T+ + + L++PR+ A ++ +P L ++A+ + G IV Sbjct: 115 AAEIGTMRVTEQIDALTTLSTNPFKYLVAPRLLAGLLMVPCLVLVADIIGVFGGYIVGVY 174 Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + + +R ++ +GL KA I ++ G+ + +G T Sbjct: 175 KLGFNPSTYLARTWEFLEPLDVISGLTKAAVFGFIISLMGCYHGYYSRGGAQGVGAATTN 234 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + +++I + + YF Sbjct: 235 SVVSAAIMILIFNYVITALYFG 256 >gi|85713028|ref|ZP_01044065.1| ABC-type transport system involved in resistance to organic solvents, permease component [Idiomarina baltica OS145] gi|85693131|gb|EAQ31092.1| ABC-type transport system involved in resistance to organic solvents, permease component [Idiomarina baltica OS145] Length = 258 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 64/255 (25%), Positives = 125/255 (49%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 ++ + +G ++ + ++QMY VGV + ++++ Sbjct: 3 RLARLGATVTDAIAGIGRALAMLLGAIIGKPTPRKSWPLFVQQMYVVGVLSLIIIVVSGL 62 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 63 FIGMVLGLQGYTILVDYGAEQSLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 122 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +++PR WA +S+PLL ++ + I G +V + + Sbjct: 123 ATEQLSSLEMMAVDPLRRVVAPRFWAGFVSMPLLALIFSAVGIYGGYLVGSGWLGVDEGA 182 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S S ++ G+IK+ A + +A+ +G+ S + K T+ VV + Sbjct: 183 FWSVMQSAVDWRDDLMNGIIKSLVFAFVVTWIALYKGYRCEPTSAGISKATTSTVVTASL 242 Query: 356 IVIIIDSLFAIFYFA 370 ++ +D + F Sbjct: 243 AILGLDFILTALMFG 257 >gi|90413007|ref|ZP_01221005.1| hypothetical protein P3TCK_24185 [Photobacterium profundum 3TCK] gi|90326022|gb|EAS42461.1| hypothetical protein P3TCK_24185 [Photobacterium profundum 3TCK] Length = 260 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 73/254 (28%), Positives = 126/254 (49%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + +G S + K L++Q+Y VGV + ++++ Sbjct: 6 IASVGRQGIEKFQTIGRATLLLYGALVSKPQPKKMFPLLMKQLYSVGVLSIAIIMVSGLF 65 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V++ QG L FGAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 IGMVLSLQGYIVLVDFGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +I+PR WA +IS+PLL ++ + I G +V + I + F Sbjct: 126 TEQLSSMEMMAVDPLRRVIAPRFWAGVISMPLLAMMFSAVGIWGGQLVGVDWKGIDYGSF 185 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S ++ L +I IK+ A I +A+ G+ S + + T VV S Sbjct: 186 WSVMQASVELGEDIGNSFIKSVVFAITITWIAVFNGYDAVPTSEGISRATTRTVVNSSLA 245 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 246 VLGLDFVLTALMFG 259 >gi|312898371|ref|ZP_07757761.1| conserved hypothetical protein [Megasphaera micronuciformis F0359] gi|310620290|gb|EFQ03860.1| conserved hypothetical protein [Megasphaera micronuciformis F0359] Length = 264 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 73/263 (27%), Positives = 119/263 (45%), Gaps = 9/263 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 ++L IG+ + + + + G I + I QM ++GV Sbjct: 11 LQHLLERIGRFTLHIFEEVGVISVLFGQTIKQM---------PRIRRDLTINQMAHLGVD 61 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 P+V L G V+ Q L ++GA+ +MS+ RE+G +LT V++AGR G+ Sbjct: 62 SFPIVALTMLFAGMVMTLQIVDILMRYGAQSTLGGIMSVAMGRELGPILTGVVVAGRVGA 121 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG+MK+ E+IDA+R M D V L+ PR A + +PLLT G V Sbjct: 122 AMTAEIGTMKVTEQIDALRCMATDPVAYLVVPRFVACVFMVPLLTFFGYLIGTGGGYCVA 181 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + + ++++ GLIKA I +VA EG + +G+ Sbjct: 182 VFSAGLTDYTYMHSIEFFTEISDVLFGLIKAGVFGGIIALVACFEGMHAKSGAEGVGQAT 241 Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369 T VV SI + I + + ++ + Sbjct: 242 TKSVVTSIIFIFITNYILSVILY 264 >gi|330501880|ref|YP_004378749.1| hypothetical protein MDS_0966 [Pseudomonas mendocina NK-01] gi|328916166|gb|AEB56997.1| hypothetical protein MDS_0966 [Pseudomonas mendocina NK-01] Length = 265 Score = 236 bits (603), Expect = 4e-60, Method: Composition-based stats. Identities = 65/256 (25%), Positives = 133/256 (51%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +++ F LG + + L LI+Q++ VGV + ++++ Sbjct: 8 ERLRLFGRAGIDVVATLGRSVLFLLGALFGRSRAGKPLQLLIKQLFAVGVMSLAIIVVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L +G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+M Sbjct: 68 IFIGMVLALQGYNILVSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +++PR+WA IS+PLL ++ + I G ++V + + Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPLLAMIFSVVGIWGGAMVAVDWLGVYEG 187 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ ++ + ++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 188 SFWANMQNSVSFYDDVLNGVIKSIVFAFVVTWIAVFQGYDCEPTSEGISRATTRTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|78357340|ref|YP_388789.1| hypothetical protein Dde_2297 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219745|gb|ABB39094.1| Protein of unknown function DUF140 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 270 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 74/270 (27%), Positives = 136/270 (50%), Gaps = 12/270 (4%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 + +G+ ++FI + LG V+ + + +++Q+Y++G Sbjct: 8 SGLTAPLQQLGRNTLRFIGE-------LGAVLLFFLDAVRHIFIASRLFRKVVQQVYFIG 60 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 + V+ LI TG V+ QG + L +FG+E +++ +RE+G +LTA+M+ GR+ Sbjct: 61 SKSLFVIALIGIFTGMVLGLQGYYTLVKFGSEGLLGAAVALTLIRELGPVLTAIMVTGRA 120 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 GSA+ AEIG M+I+++IDA+ M + + L++PR+ A +I P+LT L N IIG + Sbjct: 121 GSAMAAEIGVMRISDQIDALEVMDVPPMGYLVTPRLLASLIVFPMLTALFNTIGIIGGYL 180 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHS 339 I V+F R S+ +++ G +K A + I++ +G+ G+ Sbjct: 181 TGVVLLGINSGVYFYRIDSSVGWSDVSGGFLKTMVFAVIVSIISCYQGYFTHMRKDGMGP 240 Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + T+ VV S +V++ D + F Sbjct: 241 EGVSNSTTSAVVMSCVLVLVSDYVLTSFLL 270 >gi|330827998|ref|YP_004390950.1| ABC transporter permease [Aeromonas veronii B565] gi|328803134|gb|AEB48333.1| ABC-type transporter, permease subunit [Aeromonas veronii B565] Length = 259 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 74/255 (29%), Positives = 125/255 (49%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 +I K +G A + + LI+Q+Y VGV V ++++ Sbjct: 5 QISKLGRVGVRFISSVGRATIMLFHALAGKPEPRKHFPLLIQQLYVVGVQSVAIILVSGL 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V++ QG L FGAE L+S+ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 65 FIGMVLSLQGYNVLKDFGAEQSLGPLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMK 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +++PR WA +IS+PLL + + I G +V + + Sbjct: 125 ATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLAFMFSLIGIFGGKLVGVDWLGVDEGG 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ +I G IK+ A + +A+ G+ S + + T VV S Sbjct: 185 FWSAMQASVDWHEDIMQGAIKSLIFALVVTWIALFNGYDAKPTSAGISQATTRTVVHSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFILTAVMFG 259 >gi|312881882|ref|ZP_07741649.1| hypothetical protein VIBC2010_12694 [Vibrio caribbenthicus ATCC BAA-2122] gi|309370461|gb|EFP97946.1| hypothetical protein VIBC2010_12694 [Vibrio caribbenthicus ATCC BAA-2122] Length = 263 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 78/268 (29%), Positives = 131/268 (48%), Gaps = 8/268 (2%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 NL G++ ++ + +L G K L LIRQ+Y V Sbjct: 2 IKGVINLTASTGQRALQICESFGRASLMLW------GALVNRPQPLKNAPL-LIRQLYSV 54 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 GV + +++L G V++ QG L FGAE ++++ LRE+G ++TA++ AGR Sbjct: 55 GVQSLLIIVLSGLFIGMVLSLQGYVILVDFGAEGALGQMVALSLLRELGPVVTALLFAGR 114 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 +GSA+ AEIG MK E++ ++ M +D ++ +I+PR WA +IS+P+L ++ I G Sbjct: 115 AGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPMLAMIFMAVGIWGGQ 174 Query: 284 IVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 +V + I F+S ++ L +I LIK+ A + VA+ G+ S + Sbjct: 175 LVGVDWKGIDNGSFWSAMQASVELGQDIGNSLIKSMVFAFTVTWVALFNGYDAVPTSEGI 234 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + T VV S V+ +D + F Sbjct: 235 SRATTRTVVHSSLAVLGLDFVLTALMFG 262 >gi|308189078|ref|YP_003933209.1| ABC transport system, permease protein yrbE [Pantoea vagans C9-1] gi|308059588|gb|ADO11760.1| Putative ABC transport system, permease protein yrbE [Pantoea vagans C9-1] Length = 260 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 71/256 (27%), Positives = 123/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K + F G F+ LI+Q+Y VGV + ++++ Sbjct: 4 KALASFGRQGIETCASFGRAGLMLFHALVGKPAFRRHSPLLIKQLYSVGVLSLLIIVVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ +GAE L+++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLVLTTYGAETSLGMLVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R ++SPR WA IS+PLLT++ I G ++V + I Sbjct: 124 KATEQLSSMEMMAVDPLRRVVSPRFWAGFISMPLLTMIFTAVGIAGGALVGVSWKGIDPG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + ++ +IK+ A + +A+ G+ S + + T VV + Sbjct: 184 FFWSAMQNAVDFRTDVVNCIIKSAVFAVTVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|312959004|ref|ZP_07773523.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas fluorescens WH6] gi|311286774|gb|EFQ65336.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas fluorescens WH6] Length = 265 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +K+ F +LG G LI+Q++ VGV + ++++ Sbjct: 8 EKVRLFGRSGIDMVEVLGRSTIFLFHALLGRGGIGGGFGLLIKQLHSVGVMSLVIIVVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG LS +G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+M Sbjct: 68 IFIGMVLALQGFNILSGYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +++PR+WA ISLPLL ++ + I G S V + + Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLAMIFSVVGIWGGSWVAVDWLGVYDG 187 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 ++ ++ T ++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 188 SYWGNMQNSVTFNGDVLNGIIKSIVFAFVVTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|170723417|ref|YP_001751105.1| hypothetical protein PputW619_4256 [Pseudomonas putida W619] gi|169761420|gb|ACA74736.1| protein of unknown function DUF140 [Pseudomonas putida W619] Length = 265 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 ++I F + +LG G L +Q+Y VGV + +V + Sbjct: 8 ERIRLFGRSAIDVLAVLGRSCLFLFHALVGRGGIGGGFQLLTKQLYSVGVLSLAIVAVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+M Sbjct: 68 VFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +++PR+WA ISLPLL ++ + I G S V + + Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 187 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ ++ + ++ GL+K+ A +A+ +G+ S + + T VV + Sbjct: 188 SFWANMQNSVSFTDDVLNGLVKSLVFAFVTTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|15642515|ref|NP_232148.1| hypothetical protein VC2519 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121591413|ref|ZP_01678693.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|147675288|ref|YP_001218017.1| hypothetical protein VC0395_A2101 [Vibrio cholerae O395] gi|153215706|ref|ZP_01950087.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|153801107|ref|ZP_01955693.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|153818001|ref|ZP_01970668.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|153822409|ref|ZP_01975076.1| conserved hypothetical protein [Vibrio cholerae B33] gi|153825790|ref|ZP_01978457.1| conserved hypothetical protein [Vibrio cholerae MZO-2] gi|153829794|ref|ZP_01982461.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|227082638|ref|YP_002811189.1| hypothetical protein VCM66_2441 [Vibrio cholerae M66-2] gi|254225914|ref|ZP_04919516.1| conserved hypothetical protein [Vibrio cholerae V51] gi|254291437|ref|ZP_04962229.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|9657102|gb|AAF95661.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121546729|gb|EAX56904.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|124114624|gb|EAY33444.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|124123340|gb|EAY42083.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|125621540|gb|EAZ49872.1| conserved hypothetical protein [Vibrio cholerae V51] gi|126511436|gb|EAZ74030.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|126520052|gb|EAZ77275.1| conserved hypothetical protein [Vibrio cholerae B33] gi|146317171|gb|ABQ21710.1| conserved hypothetical protein [Vibrio cholerae O395] gi|148874712|gb|EDL72847.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|149740513|gb|EDM54628.1| conserved hypothetical protein [Vibrio cholerae MZO-2] gi|150422627|gb|EDN14582.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|227010526|gb|ACP06738.1| conserved hypothetical protein [Vibrio cholerae M66-2] gi|227014409|gb|ACP10619.1| conserved hypothetical protein [Vibrio cholerae O395] Length = 258 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 71/257 (27%), Positives = 127/257 (49%), Gaps = 3/257 (1%) Query: 116 KKIVKFINDSCSQAHILGLV-ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 + + + + + G + G + F L L+RQ+Y +GV + ++I+ Sbjct: 2 RWVSSVGQRTLAVSETFGRASLMLFGALVGRPQPIRHFPL-LVRQLYSIGVQSLAIIIVS 60 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 G V++ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG Sbjct: 61 GLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGL 120 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 MK E++ ++ M +D ++ +I+PR WA +IS+PLL ++ I G +V + I Sbjct: 121 MKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDH 180 Query: 295 AVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 F+S ++ L +I IK A + +A+ G+ S + + T VV S Sbjct: 181 GSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHS 240 Query: 354 ISIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 241 SLAVLGLDFVLTALMFG 257 >gi|127514231|ref|YP_001095428.1| hypothetical protein Shew_3303 [Shewanella loihica PV-4] gi|126639526|gb|ABO25169.1| protein of unknown function DUF140 [Shewanella loihica PV-4] Length = 261 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 75/255 (29%), Positives = 128/255 (50%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 +I + + LG A + + LI+Q+Y +GV + ++++ Sbjct: 6 QIARLGRGAIDSVTGLGRAGLMLWGAIAKIPRVRKGTPLLIKQLYVIGVQSMVIILVSGL 65 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L FG E ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 FIGMVLALQGYNILVGFGTEDSLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 125 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +I+PR WA +ISLPLL ++ I G +V ++ I Sbjct: 126 STEQLSSLEMMAIDPLRQVIAPRFWAGVISLPLLALMFTAVGIYGGHLVGVEWKGIDSGS 185 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ +I LIK+ A + +A+ G+ V + + + T VVQS Sbjct: 186 FWSILQASVEWRQDIVNCLIKSLVFAVVVTWIALYRGYHVIPNPEGISRATTQTVVQSSL 245 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D L F Sbjct: 246 AVLALDFLLTAMMFG 260 >gi|260779434|ref|ZP_05888325.1| uncharacterized ABC transporter permease component YrbE [Vibrio coralliilyticus ATCC BAA-450] gi|260604524|gb|EEX30824.1| uncharacterized ABC transporter permease component YrbE [Vibrio coralliilyticus ATCC BAA-450] Length = 263 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 126/262 (48%), Gaps = 1/262 (0%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + + + G AS + L L++Q+Y VGV + Sbjct: 1 MLSDFANFVASTGRRAMGVCESFGRASLMLFGALASRPRPIQNLPLLVKQLYSVGVQSLI 60 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +++L G V++ QG L FGAE ++++ LRE+G ++TA++ AGR+GSA+ Sbjct: 61 IIVLSGLFIGMVLSLQGYVILVDFGAEGALGQMVALSLLRELGPVVTALLFAGRAGSALT 120 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ ++ M +D ++ +I+PR WA +IS+P+L ++ I G +V + Sbjct: 121 AEIGLMKATEQLSSMEMMAVDPLKRVIAPRFWAGVISMPMLAMIFMAVGIWGGQLVGVDW 180 Query: 290 YDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 I F+S ++ L +I +IK+ A + +A+ G+ S + + T Sbjct: 181 KGIDHGSFWSAMQASVELGQDIGNSMIKSLVFAITVTWIALFNGYDAIPTSEGISRATTR 240 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV S V+ +D + F Sbjct: 241 TVVHSSLAVLGLDFVLTALMFG 262 >gi|46579657|ref|YP_010465.1| hypothetical protein DVU1246 [Desulfovibrio vulgaris str. Hildenborough] gi|46449072|gb|AAS95724.1| membrane protein, putative [Desulfovibrio vulgaris str. Hildenborough] gi|311233455|gb|ADP86309.1| protein of unknown function DUF140 [Desulfovibrio vulgaris RCH1] Length = 267 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 72/257 (28%), Positives = 129/257 (50%), Gaps = 5/257 (1%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + LG + + + L ++ Q+Y +G + V++LI Sbjct: 11 VTALGRSFLRLLGELGAMFIFMLDGFRHIFASTKQLPKIVNQVYVIGYKSLFVILLIGIF 70 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG V+ QG + L +FG+E +++ +RE+G +LTA+M+ GR+GS++ AEIG M+I Sbjct: 71 TGMVLGLQGYYTLVKFGSEGLLGAAVALTLIRELGPVLTAIMVTGRAGSSMAAEIGVMRI 130 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 ++IDA+ M ++ + L+SPRI A +++ PLLT L + IIG + I V+ Sbjct: 131 TDQIDALDVMDINPMGYLVSPRIAASLVAFPLLTALFDVIGIIGGYVTGVMLLGINEGVY 190 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCVVQ 352 F R ++ LA++ G +K+ A + V+ +G+ G+ + T+ VV Sbjct: 191 FHRIATSVELADVTGGFMKSLLFALIVSTVSCYQGYFTHMRRDGMGPEGVSNSTTSAVVM 250 Query: 353 SISIVIIIDSLFAIFYF 369 S +V++ D + F Sbjct: 251 SCVLVLVADYVLTSFLL 267 >gi|24375440|ref|NP_719483.1| hypothetical protein SO_3953 [Shewanella oneidensis MR-1] gi|24350284|gb|AAN56927.1|AE015826_12 conserved hypothetical protein TIGR00056 [Shewanella oneidensis MR-1] Length = 261 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 125/255 (49%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I + G + + L+RQ+Y VGV + ++++ Sbjct: 6 NIADLGRSAIELVLGFGRAGLMLWGAIVRWPRVRKGFPLLVRQIYVVGVQSMVIIVVSGL 65 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L FG E ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 125 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +I+PR WA +IS+PLL ++ I G +V ++ I Sbjct: 126 STEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLALMFTAVGIYGGHLVGVEWKGIDSGA 185 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ +I LIK+ A + +A+ G+ V + + + T+ VVQS Sbjct: 186 FWSILQASVEWRQDIVNCLIKSGVFAVVVTWIALYRGYQVIPNPEGISRATTSTVVQSSL 245 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D L F Sbjct: 246 AVLALDFLLTALMFG 260 >gi|323498697|ref|ZP_08103687.1| hypothetical protein VISI1226_21911 [Vibrio sinaloensis DSM 21326] gi|323316253|gb|EGA69274.1| hypothetical protein VISI1226_21911 [Vibrio sinaloensis DSM 21326] Length = 262 Score = 235 bits (601), Expect = 6e-60, Method: Composition-based stats. Identities = 73/254 (28%), Positives = 125/254 (49%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + + G AS K L L++Q+Y VGV + +++L Sbjct: 8 VASTGRRALAVLESFGRASLMLFGALASKPKPIQNLPLLVKQLYSVGVQSLLIIVLSGLF 67 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V++ QG L FGAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 68 IGMVLSLQGYVILIDFGAEGALGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 127 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D ++ +I+PR WA +IS+PLL ++ I G V + I F Sbjct: 128 TEQLSSMEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQSVGVDWKGIDHGSF 187 Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S ++ L +I +IK+ A + +A+ G+ S + + T VV S Sbjct: 188 WSTMQASVELGQDIGNSMIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLA 247 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 VLGLDFVLTALMFG 261 >gi|258622787|ref|ZP_05717805.1| conserved hypothetical protein [Vibrio mimicus VM573] gi|258625813|ref|ZP_05720692.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|262166549|ref|ZP_06034286.1| uncharacterized ABC transporter permease component YrbE [Vibrio mimicus VM223] gi|258582051|gb|EEW06921.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|258584975|gb|EEW09706.1| conserved hypothetical protein [Vibrio mimicus VM573] gi|262026265|gb|EEY44933.1| uncharacterized ABC transporter permease component YrbE [Vibrio mimicus VM223] Length = 258 Score = 235 bits (601), Expect = 6e-60, Method: Composition-based stats. Identities = 70/257 (27%), Positives = 127/257 (49%), Gaps = 3/257 (1%) Query: 116 KKIVKFINDSCSQAHILGLV-ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 + + + + + G + G + F L L+RQ+Y +GV + ++++ Sbjct: 2 RWVSSIGQRTLAVSETFGRASLMLFGALVGRPQPIRNFPL-LVRQLYSIGVQSLAIIMVS 60 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 G V++ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG Sbjct: 61 GLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGL 120 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 MK E++ ++ M +D ++ +I+PR WA +IS+PLL ++ I G +V + I Sbjct: 121 MKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDH 180 Query: 295 AVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 F+S ++ L +I IK A + +A+ G+ S + + T VV S Sbjct: 181 GSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHS 240 Query: 354 ISIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 241 SLAVLGLDFVLTALMFG 257 >gi|120600243|ref|YP_964817.1| hypothetical protein Sputw3181_3451 [Shewanella sp. W3-18-1] gi|146291827|ref|YP_001182251.1| hypothetical protein Sputcn32_0722 [Shewanella putrefaciens CN-32] gi|120560336|gb|ABM26263.1| protein of unknown function DUF140 [Shewanella sp. W3-18-1] gi|145563517|gb|ABP74452.1| protein of unknown function DUF140 [Shewanella putrefaciens CN-32] gi|319425062|gb|ADV53136.1| ABC phospholipid transporter, inner membrane subunit, MlaE [Shewanella putrefaciens 200] Length = 261 Score = 235 bits (601), Expect = 6e-60, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 125/255 (49%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I + G + + L+RQ+Y VGV + ++++ Sbjct: 6 SIADLGRSAIELVLGFGRAGLMLWGAIFRWPRVRKGFPLLVRQIYVVGVQSMVIIVVSGL 65 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L FG E ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 125 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +I+PR WA +IS+PLL ++ I G +V ++ I Sbjct: 126 STEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLALMFTAVGIYGGHLVGVEWKGIDSGA 185 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ +I LIK+ A + +A+ G+ V + + + T+ VVQS Sbjct: 186 FWSILQASVEWQKDILNCLIKSGVFAVVVTWIALYRGYQVIPNPEGISRATTSTVVQSSL 245 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D L F Sbjct: 246 AVLALDFLLTALMFG 260 >gi|238899004|ref|YP_002924686.1| putative ABC transporter, permease protein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466764|gb|ACQ68538.1| putative ABC transporter, permease protein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 261 Score = 235 bits (601), Expect = 7e-60, Method: Composition-based stats. Identities = 72/255 (28%), Positives = 123/255 (48%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + LG + + L LI+Q+Y VGV + ++++ Sbjct: 5 ESVSSLGRKGIDACSTLGRAGCMLLNIVFGKPEPRKNLPILIKQLYRVGVQSILIIVISG 64 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ +GAE L+++ RE+G +++A++ AGR+GSA+ AEIG M Sbjct: 65 LFIGMVLGLQGYLTLTTYGAEGSLGMLVALSLFRELGPVVSALLFAGRAGSALTAEIGLM 124 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +I+PR WA +ISLPLL L I G+S+V + I Sbjct: 125 KATEQLSSLEMMAIDPLRRVIAPRFWAGVISLPLLAALFISVGIFGSSMVAIDWKGIDAG 184 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S H + +++ K+ A I +++ G+ S + T VV S Sbjct: 185 FFWSAMHDSVMPSDVINCFFKSVSFAVIITWISVFNGYDATPTSEGISLATTRTVVNSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D L + F Sbjct: 245 AVLAVDFLLTVLMFG 259 >gi|167625602|ref|YP_001675896.1| hypothetical protein Shal_3697 [Shewanella halifaxensis HAW-EB4] gi|167355624|gb|ABZ78237.1| protein of unknown function DUF140 [Shewanella halifaxensis HAW-EB4] Length = 261 Score = 235 bits (601), Expect = 7e-60, Method: Composition-based stats. Identities = 78/266 (29%), Positives = 135/266 (50%), Gaps = 8/266 (3%) Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 S + +G+ ++F+ +L I A +F+ L+RQ+Y VGV Sbjct: 2 SLIDQIARLGRASIEFVIGLGKAGLMLWGAI-------AHRPRFRKGAPLLLRQLYVVGV 54 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 + ++++ G V+A QG L FG E ++++ LRE+G ++TA++ AGR+G Sbjct: 55 QSMVIILVSGLFIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAG 114 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 SA+ AE+G MK E++ ++ M +D +R +I+PR WA +ISLPLL ++ I G IV Sbjct: 115 SALTAELGLMKSTEQLASLEMMAIDPLRQIIAPRFWAGVISLPLLALMFTAVGIYGGHIV 174 Query: 286 IWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 ++ I F+S ++ +I +IK+ A + +A+ G+ V + + + Sbjct: 175 GVEWKGIDSGSFWSILQASVEWREDIVNCMIKSLLFAVVVTWIALYRGYHVIPNPEGISR 234 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370 T VVQS V+ +D L F Sbjct: 235 ATTQTVVQSSLAVLALDFLLTAIMFG 260 >gi|270263239|ref|ZP_06191509.1| hypothetical protein SOD_d02560 [Serratia odorifera 4Rx13] gi|270042927|gb|EFA16021.1| hypothetical protein SOD_d02560 [Serratia odorifera 4Rx13] Length = 260 Score = 235 bits (601), Expect = 7e-60, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + + G + + L++QM+ VGV + ++++ Sbjct: 4 QALASLGRRGINTSASFGRAGLMLFNALVGRPEPRKQWPLLLKQMHSVGVQSLLIIMVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +++PR WA +IS+PLLTI+ I G SIV + I Sbjct: 124 KATEQISSLEMMAVDPLRRIVAPRFWAGLISMPLLTIIFVAVGIWGGSIVGVDWKGIDSG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ L+K+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQGAVEWRKDLLNCLLKSVVFAITVTWIAIFNGYDAVPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|238785100|ref|ZP_04629095.1| hypothetical protein yberc0001_210 [Yersinia bercovieri ATCC 43970] gi|238796191|ref|ZP_04639701.1| hypothetical protein ymoll0001_34470 [Yersinia mollaretii ATCC 43969] gi|238713992|gb|EEQ06009.1| hypothetical protein yberc0001_210 [Yersinia bercovieri ATCC 43970] gi|238719884|gb|EEQ11690.1| hypothetical protein ymoll0001_34470 [Yersinia mollaretii ATCC 43969] Length = 260 Score = 235 bits (601), Expect = 7e-60, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 122/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + G + + L++Q+Y VGV + ++++ Sbjct: 4 QALASLGRRGINVCASFGRAGLMLFNALVGRPEPRKQWPLLVKQLYSVGVQSLLIIVVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++S+ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +++PR WA +IS+PLLT + I G S+V + I Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDGG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQNAVEWRTDLLNCLIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|260770986|ref|ZP_05879915.1| uncharacterized ABC transporter permease component YrbE [Vibrio furnissii CIP 102972] gi|260614223|gb|EEX39413.1| uncharacterized ABC transporter permease component YrbE [Vibrio furnissii CIP 102972] gi|315179032|gb|ADT85946.1| ABC-type transport system involved in resistance to organic solvents, permease component [Vibrio furnissii NCTC 11218] Length = 263 Score = 235 bits (600), Expect = 7e-60, Method: Composition-based stats. Identities = 72/262 (27%), Positives = 128/262 (48%), Gaps = 1/262 (0%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + ++ + I S G A + L LI+Q+Y VGV + Sbjct: 1 MLDNLQRWISGVGRRVLSICESFGRASLMLFGALAGRPRPIQNLPLLIKQLYSVGVQSLA 60 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++++ G V++ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ Sbjct: 61 IIVVSGLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALT 120 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ ++ M +D ++ +I+PR+WA +IS+PLL ++ I G +V + Sbjct: 121 AEIGLMKATEQLSSLEMMAVDPLKRVIAPRLWAGLISMPLLAMIFMAVGIWGGQLVGVDW 180 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 I F+S ++ L +I +IK A + +A+ G+ S + + T Sbjct: 181 KGIDHGSFWSAMQASVELGEDIGNSVIKCVAFAITVTWIALFNGYDAIPTSEGISRATTR 240 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV S V+ +D + F Sbjct: 241 TVVHSSLAVLGLDFVLTALMFG 262 >gi|227326638|ref|ZP_03830662.1| hypothetical protein PcarcW_04664 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 260 Score = 235 bits (600), Expect = 8e-60, Method: Composition-based stats. Identities = 66/256 (25%), Positives = 123/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + S + G +F+ L++Q+Y VGV + ++++ Sbjct: 4 RTLASLGRQGISTSASFGRAGLMLFNALVGKPEFRKQWPLLVKQLYSVGVQSLLIIMVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLILTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +++PR WA +IS+PLL ++ I G ++V + I Sbjct: 124 KATEQLSSMEMMAVDPLRRVVAPRFWAGLISMPLLAVIFVAVGIWGGALVGVDWKGIDSG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ +IK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQGAVDWRQDVLNCVIKSIVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|197335795|ref|YP_002155152.1| toluene tolerance protein Ttg2B, putative [Vibrio fischeri MJ11] gi|197317285|gb|ACH66732.1| toluene tolerance protein Ttg2B, putative [Vibrio fischeri MJ11] Length = 264 Score = 235 bits (600), Expect = 8e-60, Method: Composition-based stats. Identities = 83/266 (31%), Positives = 133/266 (50%), Gaps = 8/266 (3%) Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 S + IG++ + +L G A K F L L++Q+Y VGV Sbjct: 5 SLVSSIEQIGRRALSVCEAFGRATFML------LGAIFAKPQPIKMFPL-LLKQLYSVGV 57 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 + ++++ G VI+ QG L +GAE L+S+ LRE+G ++TA++ AGR+G Sbjct: 58 LSLVIIVVSGLFIGMVISLQGYIILVDYGAETSLGQLVSLSLLRELGPVVTALLFAGRAG 117 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 SA+ AEIG MK E+I ++ M +D +R +I+PR+WA IIS+P+L ++ I G IV Sbjct: 118 SALTAEIGLMKTTEQISSMEMMAVDPLRQIIAPRLWAGIISMPILAVIFMAVGIWGGQIV 177 Query: 286 IWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 ++ I + F+S S+ + +I LIK A + +A+ G+ S + Sbjct: 178 GVEWKGIDYGSFWSVMQSSVDVRYDIVNSLIKCVVFAFIVTWIALFNGYDATPTSEGISL 237 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370 T VV S V+ ID + F Sbjct: 238 ATTRTVVHSSLAVLGIDFVLTALMFG 263 >gi|227112741|ref|ZP_03826397.1| hypothetical protein PcarbP_07254 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 260 Score = 235 bits (600), Expect = 8e-60, Method: Composition-based stats. Identities = 66/256 (25%), Positives = 123/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + S + G +F+ L++Q+Y VGV + ++++ Sbjct: 4 RTLASLGRQGISTSASFGRAGLMLFNALVGKPEFRKQWPLLVKQLYSVGVQSLLIIMVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYIILTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +++PR WA +IS+PLL ++ I G ++V + I Sbjct: 124 KATEQLSSMEMMAVDPLRRVVAPRFWAGLISMPLLAVIFVAVGIWGGALVGVDWKGIDSG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ +IK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQGAVDWRQDVLNCVIKSIVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|238793703|ref|ZP_04637325.1| hypothetical protein yinte0001_800 [Yersinia intermedia ATCC 29909] gi|238726944|gb|EEQ18476.1| hypothetical protein yinte0001_800 [Yersinia intermedia ATCC 29909] Length = 260 Score = 235 bits (600), Expect = 8e-60, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 122/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + G + + L++Q+Y VGV + ++++ Sbjct: 4 QALASLGRRGINVCASFGRAGLMLFNALVGRPEPRKQWPLLVKQLYSVGVQSLLIIVVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++S+ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +++PR WA +IS+PLLT + I G S+V + I Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDGG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQNAVEWRTDLLNCLIKSLVFAITVTWIALFNGYDAVPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|109896888|ref|YP_660143.1| hypothetical protein Patl_0560 [Pseudoalteromonas atlantica T6c] gi|109699169|gb|ABG39089.1| protein of unknown function DUF140 [Pseudoalteromonas atlantica T6c] Length = 259 Score = 235 bits (600), Expect = 8e-60, Method: Composition-based stats. Identities = 70/257 (27%), Positives = 129/257 (50%), Gaps = 1/257 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + ++ G + +F I+Q+Y VGV + ++++ Sbjct: 2 QWLASIGRNTIDTVGSFGRAFLMLMGAIIAKPQFIKNTPLTIKQIYVVGVQSLLIIVVSG 61 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 62 LFIGMVMALQGYTILVDYGAEGSLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 121 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +++PR+WA IIS+P+L ++ + I+G +V + + Sbjct: 122 KATEQLSSLEMMAVDPLRRVVAPRLWAGIISMPMLALIFSAVGILGGHLVGVDWLGVDVG 181 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 ++S S+ ++ G+IK A I +A+ +G+ S + K T VV S Sbjct: 182 SYWSIMQSSVDWNEDVVNGIIKTLVFAFVITWIAIFKGYDAVPTSEGISKATTETVVFSS 241 Query: 355 SIVIIIDSLFAIFYFAI 371 V+ +D + F I Sbjct: 242 LAVLGLDFILTALMFGI 258 >gi|242277698|ref|YP_002989827.1| hypothetical protein Desal_0221 [Desulfovibrio salexigens DSM 2638] gi|242120592|gb|ACS78288.1| protein of unknown function DUF140 [Desulfovibrio salexigens DSM 2638] Length = 270 Score = 235 bits (600), Expect = 8e-60, Method: Composition-based stats. Identities = 72/270 (26%), Positives = 132/270 (48%), Gaps = 12/270 (4%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 N +GK + +N++ + L + + G ++++Y++G Sbjct: 8 NKLLLPINMVGKLSINLLNEAGAMFIFLMHGLLHIFSSL-------GIFKKSVKELYFIG 60 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V + V+ LI TG V+ Q + LS+FG+E F +++ +RE+G +LTA+M+ GR+ Sbjct: 61 VKSITVISLIGLFTGMVVGLQTQYALSKFGSEGFLGAAVALSLVRELGPVLTAIMLTGRA 120 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 GS++ AEIG M+I+E+IDA+ M ++ + L+SP++ A +IS P+LT + I+G + Sbjct: 121 GSSMTAEIGVMRISEQIDALELMDINPINYLVSPKLVASLISFPILTAFFDLIGIVGGYL 180 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHS 339 V++ R H+ +I G K+ A + V +G+ G Sbjct: 181 SGVMLMGGNAGVYWHRVHTALGWDDISAGFNKSLVFAVLVCTVCCFQGYFTHHRKDGKGP 240 Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + + TT VV S +V++ D + Sbjct: 241 EGVSQATTTAVVMSCVLVLVADYIITSLLL 270 >gi|229588433|ref|YP_002870552.1| putative ABC transporter membrane protein [Pseudomonas fluorescens SBW25] gi|229360299|emb|CAY47156.1| putative ABC transport system, membrane protein [Pseudomonas fluorescens SBW25] Length = 265 Score = 235 bits (600), Expect = 9e-60, Method: Composition-based stats. Identities = 70/256 (27%), Positives = 133/256 (51%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +K+ F +LG G L++Q++ VGV + ++++ Sbjct: 8 EKVRLFGRSGIDIVEVLGRSTIFLFHALLGRGGIGGGFGLLVKQLHAVGVMSLVIIVVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG LS +G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+M Sbjct: 68 VFIGMVLALQGFNILSSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +++PR+WA ISLPLLTI+ + I G S V + + Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLTIIFSVVGIWGGSWVAVDWLGVYDG 187 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 +++ ++ T ++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 188 SYWANMQNSVTFTGDVLNGIIKSIVFAFVVTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|319789984|ref|YP_004151617.1| protein of unknown function DUF140 [Thermovibrio ammonificans HB-1] gi|317114486|gb|ADU96976.1| protein of unknown function DUF140 [Thermovibrio ammonificans HB-1] Length = 260 Score = 235 bits (600), Expect = 9e-60, Method: Composition-based stats. Identities = 70/262 (26%), Positives = 128/262 (48%), Gaps = 7/262 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 L +G+ ++ F+ G + + ++K L I + +G Sbjct: 1 MVKLLEAVGRWVIAFLE-------FWGRWFLLSAKAVTLAFKPPLRLKRFIYYLATIGSD 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PV+ + S TG VIA + +F AE +++I RE+ +L+A+++ RSGS Sbjct: 54 SIPVIAVTSLFTGGVIALETYNAFHRFNAEFMIGAVVAISMARELSPVLSALLVTARSGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG+M++ E+IDA+ M ++ ++ LI+PRI+A ISL LT++A+ IG +V Sbjct: 114 AMAAEIGTMRVTEQIDALEMMAVNPIKFLITPRIYATTISLVFLTVIADIIGYIGGYLVS 173 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + + ++ + A + ++F GLIKA + ++ G+ + +G+ Sbjct: 174 VHIFGVNKTLYLRYTQNFAHMEDVFHGLIKAAVFGFLLSTISCLYGYYTRGGAKGVGEST 233 Query: 347 TTCVVQSISIVIIIDSLFAIFY 368 T VV S ++I D L Sbjct: 234 TKAVVSSSIAILIFDYLITYLL 255 >gi|59711002|ref|YP_203778.1| toluene ABC transporter membrane protein [Vibrio fischeri ES114] gi|59479103|gb|AAW84890.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Vibrio fischeri ES114] Length = 264 Score = 235 bits (600), Expect = 9e-60, Method: Composition-based stats. Identities = 83/266 (31%), Positives = 133/266 (50%), Gaps = 8/266 (3%) Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 S + IG++ + +L G A K F L L++Q+Y VGV Sbjct: 5 SLVSSIEQIGRRALSVCEAFGRATFML------LGAIFAKPQPIKMFPL-LLKQLYSVGV 57 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 + ++++ G VI+ QG L +GAE L+S+ LRE+G ++TA++ AGR+G Sbjct: 58 LSLVIIVVSGLFIGMVISLQGYIILVDYGAETSLGQLVSLSLLRELGPVVTALLFAGRAG 117 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 SA+ AEIG MK E+I ++ M +D +R +I+PR+WA IIS+P+L ++ I G IV Sbjct: 118 SALTAEIGLMKTTEQISSMEMMAVDPLRQIIAPRLWAGIISMPVLAVIFMAVGIWGGQIV 177 Query: 286 IWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 ++ I + F+S S+ + +I LIK A + +A+ G+ S + Sbjct: 178 GVEWKGIDYGSFWSVMQSSVDVRYDIINSLIKCVVFAFIVTWIALFNGYDATPTSEGISL 237 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370 T VV S V+ ID + F Sbjct: 238 ATTRTVVHSSLAVLGIDFVLTALMFG 263 >gi|212711087|ref|ZP_03319215.1| hypothetical protein PROVALCAL_02156 [Providencia alcalifaciens DSM 30120] gi|212686255|gb|EEB45783.1| hypothetical protein PROVALCAL_02156 [Providencia alcalifaciens DSM 30120] Length = 262 Score = 235 bits (600), Expect = 9e-60, Method: Composition-based stats. Identities = 73/256 (28%), Positives = 122/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K I F G +F L++Q+Y VGV + +V + Sbjct: 6 KAIAAFGRRWIETFAAFGRAGYLLFGALFGKPEFGKQWPLLVKQLYSVGVQSLLIVAVSG 65 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ F AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 66 LFIGMVLGLQGYLVLTTFSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 125 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +++PR WA IS+PLL+++ IIG +IV + I Sbjct: 126 KATEQISSLEMMAVDPLRRVVAPRFWAGFISMPLLSLIFVAVGIIGGAIVGVDWKGIDPG 185 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S S+ ++ IK+ A + +A+ G+ S + + T VV + Sbjct: 186 FFWSSMQSSVEWRLDLVNCFIKSVVFAITVTWIALFNGYDAIPTSEGISRATTKTVVHAS 245 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 246 LSVLGLDFVLTALMFG 261 >gi|292486812|ref|YP_003529682.1| hypothetical protein EAMY_0324 [Erwinia amylovora CFBP1430] gi|292900790|ref|YP_003540159.1| membrane protein [Erwinia amylovora ATCC 49946] gi|291200638|emb|CBJ47770.1| putative membrane protein [Erwinia amylovora ATCC 49946] gi|291552229|emb|CBA19266.1| UPF0393 inner membrane protein yrbE [Erwinia amylovora CFBP1430] gi|312170880|emb|CBX79139.1| UPF0393 inner membrane protein yrbE [Erwinia amylovora ATCC BAA-2158] Length = 260 Score = 235 bits (600), Expect = 9e-60, Method: Composition-based stats. Identities = 71/256 (27%), Positives = 124/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + LG +F+ L++Q+Y +GV + +V++ Sbjct: 4 QALALLGRQGIRFCASLGRAGLMLFHALFGIPRFRRHAPLLVKQLYSIGVLSLLIVVVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLVLKTYGAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +ISPR WA IS+PLLT++ I+G ++V + I Sbjct: 124 KATEQLSSMEMMAVDPLRRIISPRFWAGFISMPLLTLIFVAVGILGGTLVGVSWKGIDPG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + L +I IK+ A + +A+ G+ S + + T VV + Sbjct: 184 YFWSAMQNAVDLQTDIINCTIKSAVFALTVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|152999232|ref|YP_001364913.1| hypothetical protein Shew185_0693 [Shewanella baltica OS185] gi|160873845|ref|YP_001553161.1| hypothetical protein Sbal195_0723 [Shewanella baltica OS195] gi|217971905|ref|YP_002356656.1| hypothetical protein Sbal223_0714 [Shewanella baltica OS223] gi|304411204|ref|ZP_07392819.1| protein of unknown function DUF140 [Shewanella baltica OS183] gi|307306499|ref|ZP_07586242.1| protein of unknown function DUF140 [Shewanella baltica BA175] gi|151363850|gb|ABS06850.1| protein of unknown function DUF140 [Shewanella baltica OS185] gi|160859367|gb|ABX47901.1| protein of unknown function DUF140 [Shewanella baltica OS195] gi|217497040|gb|ACK45233.1| protein of unknown function DUF140 [Shewanella baltica OS223] gi|304350397|gb|EFM14800.1| protein of unknown function DUF140 [Shewanella baltica OS183] gi|306910790|gb|EFN41218.1| protein of unknown function DUF140 [Shewanella baltica BA175] gi|315266072|gb|ADT92925.1| protein of unknown function DUF140 [Shewanella baltica OS678] Length = 261 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 74/255 (29%), Positives = 124/255 (48%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I + G + + L+RQ+Y VGV + ++++ Sbjct: 6 SIADLGRSAIELVLGFGRAGLMLWGAIFRWPRVRKGFPLLVRQIYVVGVQSMVIILVSGL 65 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L FG E ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 125 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +I+PR WA +IS+PLL ++ I G IV ++ I Sbjct: 126 STEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLALMFTAVGIYGGHIVGVEWKGIDSGA 185 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ +I LIK+ A + +A+ G+ V + + + T VVQS Sbjct: 186 FWSILQASVEWRQDIVNCLIKSGVFAVVVTWIALYRGYQVIPNPEGISRATTQTVVQSSL 245 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D L F Sbjct: 246 AVLALDFLLTALMFG 260 >gi|126175856|ref|YP_001052005.1| hypothetical protein Sbal_3661 [Shewanella baltica OS155] gi|125999061|gb|ABN63136.1| protein of unknown function DUF140 [Shewanella baltica OS155] Length = 261 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 74/255 (29%), Positives = 124/255 (48%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I + G + + L+RQ+Y VGV + ++++ Sbjct: 6 SIANLGRSAIELVLGFGRAGLMLWGAIFRWPRVRKGFPLLVRQIYVVGVQSMVIILVSGL 65 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L FG E ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 125 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +I+PR WA +IS+PLL ++ I G IV ++ I Sbjct: 126 STEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLALMFTAVGIYGGHIVGVEWKGIDSGA 185 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ +I LIK+ A + +A+ G+ V + + + T VVQS Sbjct: 186 FWSILQASVEWRQDIVNCLIKSGVFAVVVTWIALYRGYQVIPNPEGISRATTQTVVQSSL 245 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D L F Sbjct: 246 AVLALDFLLTALMFG 260 >gi|326795053|ref|YP_004312873.1| hypothetical protein Marme_1781 [Marinomonas mediterranea MMB-1] gi|326545817|gb|ADZ91037.1| protein of unknown function DUF140 [Marinomonas mediterranea MMB-1] Length = 260 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 81/257 (31%), Positives = 134/257 (52%), Gaps = 2/257 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 KK+ Q +G + A ++ L+ Q+Y VGV + +VI+ Sbjct: 2 KKVRNVGQSLFDQLESIGRAGIFLFQTLARLPVRWDESCRLLVNQVYSVGVLSLVIVIVS 61 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 G V+A QG L++FG+E L+++ LRE+G ++TA++ AGR+GSA+ AEIG Sbjct: 62 GCFIGMVLALQGYTILAKFGSEQAVGQLLALSLLRELGPVVTALLFAGRAGSALTAEIGL 121 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 MK E++ + MG+D +R +I+PR A +I +PLL ++ + + I+G +V + I Sbjct: 122 MKATEQLSSYEMMGVDPLRRVIAPRFIAGMICMPLLCLIFSATGILGGMLVSVHWLGIYD 181 Query: 295 AVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 F+S + ++F G+IK+ F ACAI +A+ +GF S +GK T VV Sbjct: 182 GSFWSLMQQSVYFDIDVFNGIIKSIFFACAITWIAVYQGFECDPTSEGIGKATTRTVVLG 241 Query: 354 ISIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 242 SLAVLFLDFILTAAMFG 258 >gi|332163079|ref|YP_004299656.1| hypothetical protein YE105_C3459 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325667309|gb|ADZ43953.1| hypothetical protein YE105_C3459 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330862752|emb|CBX72894.1| UPF0393 inner membrane protein yrbE [Yersinia enterocolitica W22703] Length = 260 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + G + + L++Q+Y VGV + ++++ Sbjct: 4 QALASLGRRGINVCASFGRAGLMLFNALVGRPEPRKQWPLLVKQLYSVGVQSLLIIVVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++S+ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +++PR WA +IS+PLLT + I G S+V + I Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDGG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S S ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQSAVEWRTDLLNCLIKSLVFAVTVTWIALFNGYDAVPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|297844946|ref|XP_002890354.1| hypothetical protein ARALYDRAFT_472206 [Arabidopsis lyrata subsp. lyrata] gi|297336196|gb|EFH66613.1| hypothetical protein ARALYDRAFT_472206 [Arabidopsis lyrata subsp. lyrata] Length = 350 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 55/232 (23%), Positives = 113/232 (48%) Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198 G+ K K + ++Q+ G + V +L S G Q + ++ G Sbjct: 109 AGQVVLRILKGKIHWRNTLQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFTRLGLNRS 168 Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258 ++++ RE+ ++T++++AGR GSA AE+G+M+++E+ D +R +G D + LI+P Sbjct: 169 IGGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADPIDYLITP 228 Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318 R+ A ++LP LT++ + ++++ Y I + H +I + +IK+ Sbjct: 229 RVIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMDSAHRALRPWDIVSAMIKSQ 288 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 I +++ G + +G+ T+ VV S+ + I D + + F+F Sbjct: 289 VFGAIISVISCSWGVTTTGGAKGVGESTTSAVVMSLVGIFIADFVLSSFFFQ 340 >gi|123443934|ref|YP_001007905.1| hypothetical protein YE3751 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090895|emb|CAL13777.1| putative membrane protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 260 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + G + + L++Q+Y VGV + ++++ Sbjct: 4 QALASLGRRGINVCASFGRAGLMLFNALVGRPEPRKQWPLLVKQLYSVGVQSLLIIVVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++S+ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +++PR WA +IS+PLLT + I G S+V + I Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDGG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S S ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQSAVEWRTDLLNCLIKSLVFAITVTWIALFNGYDAVPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|167031981|ref|YP_001667212.1| hypothetical protein PputGB1_0966 [Pseudomonas putida GB-1] gi|166858469|gb|ABY96876.1| protein of unknown function DUF140 [Pseudomonas putida GB-1] Length = 265 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +++ + +LG G L +Q+Y VGV + +V++ Sbjct: 8 ERVRLLGRSAIDVLAVLGRSCLFLFHALVGRGGIGGGFQLLTKQLYSVGVLSLAIVVVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+M Sbjct: 68 VFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +++PR+WA ISLPLL ++ + I G S V + + Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 187 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ ++ + ++ GL+K+ A +A+ +G+ S + + T VV + Sbjct: 188 SFWANMQNSVSFTDDVLNGLVKSLVFAFVTTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|170717850|ref|YP_001784909.1| hypothetical protein HSM_1589 [Haemophilus somnus 2336] gi|168825979|gb|ACA31350.1| protein of unknown function DUF140 [Haemophilus somnus 2336] Length = 261 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 73/258 (28%), Positives = 126/258 (48%), Gaps = 1/258 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + I LG + + LI+Q+Y +GV + +++L Sbjct: 3 RVISSLGRWGMDFCRSLGRAGFMLFGALVGKQQMRKHFPLLIKQLYVLGVQSLLIIMLSG 62 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 63 LFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 122 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +ISPR WA +IS+P+L ++ I G S+V + + Sbjct: 123 KATEQLSSLEMMAVDPLRRVISPRFWAGVISMPILAVIFTAIGIWGGSLVGVDWKGVDAG 182 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ + ++ G IK+ A A+ +A+ G+ S + K T VV + Sbjct: 183 SFWSVMQNSVSWGYDLLNGCIKSLCFAIAVVWIALFNGYDCIPTSEGISKATTKTVVHAS 242 Query: 355 SIVIIIDSLFAIFYFAIG 372 +V+ +D + F G Sbjct: 243 LVVLGLDFVLTALMFGAG 260 >gi|269960373|ref|ZP_06174747.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269834984|gb|EEZ89069.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 263 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 76/267 (28%), Positives = 132/267 (49%), Gaps = 8/267 (2%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 +SF +G++ + +L G K F L LI+Q+Y VG Sbjct: 3 DSFIQFVASLGRRTLAICEAFGRATLML------IGALVTRPQPIKNFPL-LIKQLYSVG 55 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V + ++++ G V++ QG L +GAE ++++ LRE+G ++TA++ AGR+ Sbjct: 56 VQSLAIIVVSGLFIGMVLSLQGYVVLVDYGAEGSLGQMVALSLLRELGPVVTALLFAGRA 115 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 GSA+ AEIG MK E++ ++ M +D ++ +I+PR WA +IS+PLL ++ I GA I Sbjct: 116 GSALTAEIGLMKATEQLSSMEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGAQI 175 Query: 285 VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 V + + F++ S+ L +I +IK A + +A+ G+ S + Sbjct: 176 VGVDWKGVDHGSFWAAMQSSVELGQDIGNSMIKCIVFAITVTWIALFNGYDAIPTSEGIS 235 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370 + T VV S V+ +D + F Sbjct: 236 RATTRTVVHSSLAVLGLDFVLTALMFG 262 >gi|238756123|ref|ZP_04617444.1| hypothetical protein yruck0001_2780 [Yersinia ruckeri ATCC 29473] gi|238705662|gb|EEP98058.1| hypothetical protein yruck0001_2780 [Yersinia ruckeri ATCC 29473] Length = 260 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 121/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + G + + L++Q+Y VGV + ++++ Sbjct: 4 QTLASVGRKGINVCATFGRAGLMLFNAIVGRPQLRQQWPLLVKQLYSVGVQSLLIIMVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++S+ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +++PR WA +IS+PLLT + I G S+V + I Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDSG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQGAVEWRTDLLNCLIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|157963422|ref|YP_001503456.1| hypothetical protein Spea_3608 [Shewanella pealeana ATCC 700345] gi|157848422|gb|ABV88921.1| protein of unknown function DUF140 [Shewanella pealeana ATCC 700345] Length = 261 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 127/255 (49%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I + + LG +F+ L++Q+Y +GV + ++I+ Sbjct: 6 HIARLGRAAIELVIGLGQAGLMLWGAIVHRPRFRKGTPLLLKQLYVIGVQSMVIIIVSGL 65 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L FG E ++++ LRE+G ++TA++ AGR+GSA+ AE+G MK Sbjct: 66 FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAELGLMK 125 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +I+PR WA +ISLPLL ++ I G +V ++ I Sbjct: 126 STEQLSSLEMMAIDPLRQIIAPRFWAGVISLPLLALMFTAVGIYGGHLVGVEWKGIDSGS 185 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ +I +IK+ A + +A+ G+ V + + + T VVQS Sbjct: 186 FWSILQASVEWREDIVNCIIKSLLFAVVVTWIALYRGYHVIPNPEGISRATTQTVVQSSL 245 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D L F Sbjct: 246 AVLALDFLLTAVMFG 260 >gi|50119256|ref|YP_048423.1| hypothetical protein ECA0296 [Pectobacterium atrosepticum SCRI1043] gi|49609782|emb|CAG73216.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043] Length = 260 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + S + G +F+ L++Q+Y VGV + ++I+ Sbjct: 4 RTLASLGRQGISASASFGRAGLMLFNALVGKPEFRKQWPLLVKQLYSVGVQSLLIIIVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYIILTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +++PR WA +IS+PLL ++ I G ++V + I Sbjct: 124 KATEQLSSMEMMAVDPLRRVVAPRFWAGLISMPLLAVIFVAVGIWGGALVGVDWKGIDSG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ +IK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQGAVDWRQDVLNCVIKSIVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|117919131|ref|YP_868323.1| hypothetical protein Shewana3_0679 [Shewanella sp. ANA-3] gi|117611463|gb|ABK46917.1| protein of unknown function DUF140 [Shewanella sp. ANA-3] Length = 261 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 125/255 (49%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I + G + + L+RQ+Y VGV + ++++ Sbjct: 6 SIADLGRSAIDLVLGFGRAGLMLWGAIFRWPRVRKGFPLLVRQIYVVGVQSMVIIVVSGL 65 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L FG E ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 125 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +I+PR WA +IS+PLL ++ I G +V ++ I Sbjct: 126 STEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLALMFTAVGIYGGHLVGVEWKGIDGGA 185 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ +I LIK+ A + +A+ G+ V + + + T+ VVQS Sbjct: 186 FWSILQASVEWRQDIVNCLIKSGVFAVVVTWIALYRGYQVVPNPEGISRATTSTVVQSSL 245 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D L F Sbjct: 246 AVLALDFLLTALMFG 260 >gi|113969024|ref|YP_732817.1| hypothetical protein Shewmr4_0680 [Shewanella sp. MR-4] gi|114048831|ref|YP_739381.1| hypothetical protein Shewmr7_3342 [Shewanella sp. MR-7] gi|113883708|gb|ABI37760.1| protein of unknown function DUF140 [Shewanella sp. MR-4] gi|113890273|gb|ABI44324.1| protein of unknown function DUF140 [Shewanella sp. MR-7] Length = 261 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 125/255 (49%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I + G + + L+RQ+Y VGV + ++++ Sbjct: 6 SIADLGRSAIELVLGFGRAGLMLWGAIVRWPRVRKGFPLLVRQIYVVGVQSMVIIVVSGL 65 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L FG E ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 125 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +I+PR WA +IS+PLL ++ I G +V ++ I Sbjct: 126 STEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLALMFTAVGIYGGHLVGVEWKGIDGGA 185 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ +I LIK+ A + +A+ G+ V + + + T+ VVQS Sbjct: 186 FWSILQASVEWRQDIVNCLIKSGVFAVVVTWIALYRGYQVVPNPEGISRATTSTVVQSSL 245 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D L F Sbjct: 246 AVLALDFLLTALMFG 260 >gi|197287459|ref|YP_002153331.1| hypothetical protein PMI3656 [Proteus mirabilis HI4320] gi|194684946|emb|CAR47136.1| putative membrane protein [Proteus mirabilis HI4320] Length = 259 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 69/254 (27%), Positives = 122/254 (48%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + S S G +F+ L++Q+Y VGV + ++++ Sbjct: 5 LARLGARSLSIFATFGRAGIMLFRALIGKPEFRKQWPLLMKQLYSVGVQSLLIIMVSGLF 64 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L+ F AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 65 IGMVLGLQGYLVLTTFSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 124 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+I ++ M +D +R +++PR WA IS+PLL+++ I G +IV + I F Sbjct: 125 TEQISSLEMMAVDPLRRVVAPRFWAGFISMPLLSLIFVAVGIWGGAIVGVDWKGIDEGFF 184 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 ++ ++ IK+ A + +A+ G+ S + + T VV S Sbjct: 185 WASMQGAVEWQKDLVNCFIKSVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLA 244 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 VLGLDFVLTALMFG 258 >gi|258593363|emb|CBE69702.1| toluene transporter subunit: membrane component of ABC superfamily [NC10 bacterium 'Dutch sediment'] Length = 247 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 81/244 (33%), Positives = 136/244 (55%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +LG + T + + LIRQ+ ++GV + + + + TG V+A Q A Sbjct: 1 MLELLGGLSQLTYDTVCCACTPPFNPRELIRQVDHIGVKSISIAGVAAAFTGLVLALQTA 60 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + LS+FGA+ + ++S+ +RE+G +LTA+++ GR GS I AE+GSMK+ E+IDA+R M Sbjct: 61 YGLSRFGAKAYVGIIVSLSMVRELGPVLTALLVGGRVGSGITAELGSMKVTEQIDAMRAM 120 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G + V+ L+ PR+ + ++ LPLLT++A+ I+G ++ + + + +++ TL Sbjct: 121 GANPVKKLVVPRVLSTMLVLPLLTVMADILGILGGMVISKYEFQVDYHFYYNTVTRNLTL 180 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 A+I +GL K I IV +G A + LGK T VV S VII D F Sbjct: 181 ADIVSGLGKTVVFGFIIAIVGCYKGLATVGGTEGLGKATTATVVTSAIAVIISDFFLTKF 240 Query: 368 YFAI 371 ++ + Sbjct: 241 FWWL 244 >gi|188532480|ref|YP_001906277.1| ABC transporter, permease subunit, probable toluene tolerance protein [Erwinia tasmaniensis Et1/99] gi|188027522|emb|CAO95369.1| ABC transporter, permease subunit, probable toluene tolerance protein [Erwinia tasmaniensis Et1/99] Length = 260 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + G +F+ L++Q+Y +GV + +V++ Sbjct: 4 QALASLGRQGINFCASFGRAGLMLFHALFGIPRFRKHAPLLVKQLYSIGVLSLLIVVVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLVLKTYSAETSLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +ISPR WA IS+PLLT++ I+G ++V + I Sbjct: 124 KATEQLSSMEMMAVDPLRRIISPRFWAGFISMPLLTLIFVAVGILGGALVGVSWKGIDPG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + L +I IK+ A + +A+ G+ S + + T VV + Sbjct: 184 FFWSAMQNAVDLRTDIINCTIKSAVFALTVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|113461315|ref|YP_719384.1| ABC transporter permease [Haemophilus somnus 129PT] gi|112823358|gb|ABI25447.1| permease component, possible ABC transporter [Haemophilus somnus 129PT] Length = 261 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 72/258 (27%), Positives = 127/258 (49%), Gaps = 1/258 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + I LG + + LI+Q+Y +GV + +++L Sbjct: 3 RVISSLGRWGMDFCRSLGRAGFMLFGALVGKQQMRKHFPLLIKQLYVLGVQSLLIIMLSG 62 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 63 LFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 122 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +ISPR WA +IS+P+L ++ I G S++ + + Sbjct: 123 KATEQLSSLEMMAVDPLRRVISPRFWAGVISMPILAVIFTAIGIWGGSLIGVDWKGVDAG 182 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ + + ++ G IK+ A A+ +A+ G+ S + K T VV + Sbjct: 183 SFWSVMQNSVSWSYDLLNGFIKSLCFAIAVVWIALFNGYDCIPTSEGISKATTKTVVHAS 242 Query: 355 SIVIIIDSLFAIFYFAIG 372 +V+ +D + F G Sbjct: 243 LVVLGLDFVLTALMFGAG 260 >gi|238764271|ref|ZP_04625223.1| hypothetical protein ykris0001_25370 [Yersinia kristensenii ATCC 33638] gi|238697552|gb|EEP90317.1| hypothetical protein ykris0001_25370 [Yersinia kristensenii ATCC 33638] Length = 260 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + G + + L++Q+Y VGV + ++++ Sbjct: 4 QALASLGRRGINVCVSFGRAGLMLFNALVGRPEPRKQWPLLVKQLYSVGVQSLLIIVVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++S+ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +++PR WA +IS+PLLT + I G S+V + I Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDSG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S S ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQSAVEWRTDLLNCLIKSLVFAITVTWIALFNGYDAVPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|90580197|ref|ZP_01236004.1| hypothetical protein VAS14_19736 [Vibrio angustum S14] gi|90438499|gb|EAS63683.1| hypothetical protein VAS14_19736 [Vibrio angustum S14] Length = 260 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 74/255 (29%), Positives = 129/255 (50%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I + +G S + + LI+Q+Y VGV + ++++ Sbjct: 5 AIAHLGRSGIEKCQTMGRATLMLFGALVSKPQPRKMFPLLIKQLYSVGVLSIAIILVSGL 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V++ QG L+ FGAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 65 FIGMVLSLQGYLVLADFGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +I+PR WA +IS+PLL ++ + + GA IV + I + Sbjct: 125 ATEQLSSMEMMAVDPLRRVIAPRFWAGVISMPLLALMFSVVGLWGAQIVGVDWKGIDYGS 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S S+ + +I +IKA A + +A+ G+ S + + T VV S Sbjct: 185 FWSVMQSSVNFSYDIGNSIIKAVAFAITVTWIAVFNGYDAVPTSEGISRATTRTVVNSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFILTALMFG 259 >gi|261250143|ref|ZP_05942719.1| uncharacterized ABC transporter permease component YrbE [Vibrio orientalis CIP 102891] gi|260939259|gb|EEX95245.1| uncharacterized ABC transporter permease component YrbE [Vibrio orientalis CIP 102891] Length = 262 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 73/254 (28%), Positives = 126/254 (49%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + S + G AS + L LI+Q+Y VGV + +++L Sbjct: 8 VASVGQRSMAICESFGRASLMLFGAIASRPQPIKNLPLLIKQLYSVGVQSLIIIVLSGLF 67 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V++ QG L FGAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 68 IGMVLSLQGYVILVDFGAEGALGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 127 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D ++ +I+PR WA +IS+P+L ++ I G +V + I F Sbjct: 128 TEQLSSMEMMAVDPLKRVIAPRFWAGVISMPMLAMIFMAVGIWGGQLVGVDWKGIDHGSF 187 Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S ++ L +I +IK+ A + +A+ G+ S + + T VV S Sbjct: 188 WSAMQASVELGQDIGNSMIKSVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLA 247 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 VLGLDFVLTALMFG 261 >gi|253686687|ref|YP_003015877.1| hypothetical protein PC1_0282 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753265|gb|ACT11341.1| protein of unknown function DUF140 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 260 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 66/256 (25%), Positives = 123/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + S + G +F+ L++Q+Y VGV + ++++ Sbjct: 4 RTLASLGRQGISTSAAFGRAGLMLFNALVGKPEFRKQWPLLVKQLYSVGVQSLLIIMVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYIVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +++PR WA +IS+PLL ++ I G ++V + I Sbjct: 124 KATEQLSSMEMMAVDPLRRVVAPRFWAGLISMPLLAVIFVAVGIWGGALVGVDWKGIDSG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ +IK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQGAVDWRQDVLNCVIKSVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|294139194|ref|YP_003555172.1| hypothetical protein SVI_0423 [Shewanella violacea DSS12] gi|293325663|dbj|BAJ00394.1| conserved hypothetical protein [Shewanella violacea DSS12] Length = 258 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 76/255 (29%), Positives = 126/255 (49%), Gaps = 2/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + LG + KGF L ++Q+Y VGV + ++++ Sbjct: 4 SLANLGRGGIDLVTGLGRAGLMLWGAVVRKPRLKGFSL-FVKQLYVVGVQSMVLILISGL 62 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L FG E ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 63 FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 122 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +I+PR WA ++SLPLLT++ I G +V ++ I Sbjct: 123 STEQLSSLEMMAIDPLRQIIAPRFWAGVVSLPLLTLMFTAVGIYGGHLVGVEWKGIDSGS 182 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ +I LIK+ + +A+ G+ V + + K T VVQS Sbjct: 183 FWSILQASVEWRQDIVNCLIKSFLFGIVVTWIALYRGYQVTPNPEGISKATTQTVVQSSL 242 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D L F Sbjct: 243 AVLALDFLLTALMFG 257 >gi|56710306|dbj|BAD81021.1| permease component of ABC-type transport system [uncultured bacterium] Length = 405 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 94/368 (25%), Positives = 167/368 (45%), Gaps = 17/368 (4%) Query: 3 ENGITVFRFAGNWK----SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI 58 + V +G W+ +P + +A+ + A + Q+ VD +A+ D+ + Sbjct: 38 QGDSLVVALSGAWQLGRPAPRFAPLAESALSAGTGATQTARVTVDAAALGSWDSSLLIFL 97 Query: 59 M---YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIG 115 F E + + I L +L + + + P L +G Sbjct: 98 RQGQEFCEAHKLDFVTDALPDRITSLLALARAVPERAVDAEVPALP--------LRARVG 149 Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 V + S + LG V+ + + ++ Q G +P+V LI+ Sbjct: 150 LAGVSAWDASMAAVTFLGEVLQRGALLLRGRVRMRWREFWVVVQ--SNGSGALPIVTLIA 207 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 + G +IA G L +FGA ++ L+ LRE+G L+T ++IAGR+G+A AE+GSM Sbjct: 208 LLVGVIIAFLGVVVLKRFGAGYYASYLVGFGMLREMGALMTGIIIAGRTGAAFAAELGSM 267 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 KI EEIDA+ T+G+ V L+ PR+ L + +PLL + A+ I+G V D+ Sbjct: 268 KITEEIDALTTLGISPVDHLVLPRVLGLFVMMPLLVVYADLVGIVGGMGVAVAMLDVTPT 327 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F + + L++ G+ K IG+ +G G + ++G+ T+ VV SI+ Sbjct: 328 QFMNGLLTAVVLSDALLGVFKGLIFGAIIGLAGCMKGLQAGSDAGAVGRAATSAVVISIT 387 Query: 356 IVIIIDSL 363 +VI+ +++ Sbjct: 388 LVILANAV 395 >gi|18149137|dbj|BAB83590.1| toluene resistance protein Trg1 [Pseudomonas putida] gi|269200089|gb|ACZ28672.1| Ttg2B [Pseudomonas putida] Length = 265 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +++ + +LG G L +Q+Y VGV + +V++ Sbjct: 8 ERVRLLGRSAIDVLAVLGRSCLFLFHALVGRGGIGGGFQLLTKQLYSVGVLSLAIVVVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+M Sbjct: 68 VFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +++PR+WA ISLPLL ++ + I G S V + + Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 187 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ ++ + ++ GL+K+ A +A+ +G+ S + + T VV + Sbjct: 188 SFWANMQNSVSFTDDVLNGLVKSVVFAFVSTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|39995923|ref|NP_951874.1| hypothetical protein GSU0817 [Geobacter sulfurreducens PCA] gi|39982687|gb|AAR34147.1| conserved hypothetical protein [Geobacter sulfurreducens PCA] gi|298504937|gb|ADI83660.1| transporter membrane protein of unknown function DUF140 [Geobacter sulfurreducens KN400] Length = 257 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 129/263 (49%), Gaps = 7/263 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + IG + + + L + N + +Q++++G Sbjct: 2 LVSSIEKIGALTLFVVREMGKMLIFLTYALVNIVIRPGKPIH-------IYKQIHFIGAK 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + V++L + TG V+ QG + L++FG+E +++ +RE+G +L+A+M+ GR+GS Sbjct: 55 SLFVIVLTAAFTGMVLGLQGYYTLAKFGSEGMLGSAVALSLIRELGPVLSALMVVGRAGS 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 AI AEIG KI E+IDA++TM L+ + L+SP+I A +I+LPLL + + I G +V Sbjct: 115 AITAEIGIKKITEQIDALKTMALEPFKYLVSPKILAALIALPLLCAIFDVVGIYGGYVVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 K + +FS + ++++G++K+ I V +G+ + + + Sbjct: 175 VKLLGVNPGAYFSEMERSVEWKDVWSGIVKSFSFGGIIAWVCCYKGYHASHGAEGVSRAT 234 Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369 T VV S +V+I D Sbjct: 235 TEAVVMSSVLVLIWDYFLTSVML 257 >gi|268590740|ref|ZP_06124961.1| toluene tolerance ABC efflux transporter, permease [Providencia rettgeri DSM 1131] gi|291313512|gb|EFE53965.1| toluene tolerance ABC efflux transporter, permease [Providencia rettgeri DSM 1131] Length = 260 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K I F G +F+ L++Q+Y +GV + ++ + Sbjct: 4 KAIAAFGRRWIDIFSAFGRAGYMLFRALLGKPEFRKQWPLLMKQLYAIGVQSLLIIAVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ F AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLVLTTFSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +I+PR WA IS+PLL+++ I+G ++V + I Sbjct: 124 KATEQISSLEMMAVDPLRRVIAPRFWAGFISMPLLSLIFVAVGILGGALVGVDWKGIDEG 183 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ S+ ++ +IK+ A + +A+ G+ S + + T VV + Sbjct: 184 FFWASMQSSVDWRLDLVNCVIKSLVFAITVTWIALFNGYDAIPTSEGISQATTRTVVHAS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LSVLGLDFVLTALMFG 259 >gi|145297399|ref|YP_001140240.1| ABC-type transporter, permease subunit [Aeromonas salmonicida subsp. salmonicida A449] gi|142850171|gb|ABO88492.1| ABC-type transporter, permease subunit [Aeromonas salmonicida subsp. salmonicida A449] Length = 259 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 71/255 (27%), Positives = 123/255 (48%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 ++ K +G A + + L++Q+Y VGV V ++++ Sbjct: 5 QVSKLGRVGVRVISSIGRATIMLFHALAGKPEPRKHFPLLLQQLYVVGVQSVAIILVSGL 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V++ QG L FGAE L+S+ LRE+G ++T ++ AGR+GSA+ AEIG MK Sbjct: 65 FIGMVLSLQGYNVLKDFGAEQSLGPLVSLSLLRELGPVVTGLLFAGRAGSALTAEIGLMK 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +++PR WA +IS+PLL + + I G +V + Sbjct: 125 ATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLAFMFSLIGIFGGKLVGVDLLGVDEGS 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ +I G IK+ A + +A+ G+ S + + T VV S Sbjct: 185 FWSAMQASVDWQDDIMQGAIKSLIFALVVTWIALFNGYDAKPTSAGISQATTRTVVHSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFILTAVMFG 259 >gi|15605864|ref|NP_213241.1| hypothetical protein aq_355 [Aquifex aeolicus VF5] gi|2983037|gb|AAC06647.1| hypothetical protein aq_355 [Aquifex aeolicus VF5] Length = 245 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 75/242 (30%), Positives = 119/242 (49%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +G T +K L I Q+ YV PVV++ S TG VIA Q Sbjct: 4 FLEEVGRATLLTLWSIFFLFKKPPRLKHFISQLTYVAAETTPVVLVTSLFTGGVIALQTY 63 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 +F AE +++I RE+G +LT++M+ R GSA+ A IG+M+I ++IDA+ M Sbjct: 64 STFHRFNAEYLIGAVVAISMGRELGPVLTSLMVVARVGSAMTASIGTMRITQQIDALEVM 123 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 ++ + L++PRI+A +PLLT+L++ + I G V K + + +++ + Sbjct: 124 AINPISFLVTPRIFATTFGVPLLTVLSDVAGIFGGWFVATKLFGVNEYLYWQKMVDLTEF 183 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 +I GL KA F IG V+ GF + +GK T VV S +++I D Sbjct: 184 HDIVGGLYKATFFGFIIGAVSCYYGFYTKGGTAGVGKATTNSVVTSSMLILISDYFLTAV 243 Query: 368 YF 369 F Sbjct: 244 IF 245 >gi|148546241|ref|YP_001266343.1| hypothetical protein Pput_0998 [Pseudomonas putida F1] gi|148510299|gb|ABQ77159.1| protein of unknown function DUF140 [Pseudomonas putida F1] Length = 265 Score = 234 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +++ + +LG G L +Q+Y VGV + +V++ Sbjct: 8 ERVRLLGRSAIDVLAVLGRSCLFLFHALVGRGGIGGGFQLLTKQLYSVGVLSLAIVVVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+M Sbjct: 68 VFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +++PR+WA ISLPLL ++ + I G S V + + Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 187 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ ++ + ++ GL+K+ A +A+ +G+ S + + T VV + Sbjct: 188 SFWANMQNSVSFTDDVLNGLVKSLVFAFVSTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|300718605|ref|YP_003743408.1| toluene tolerance ABC transporter, permease subunit [Erwinia billingiae Eb661] gi|299064441|emb|CAX61561.1| toluene tolerance ABC transporter, permease subunit [Erwinia billingiae Eb661] Length = 257 Score = 234 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 71/254 (27%), Positives = 125/254 (49%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + G +F+ LI+Q+Y +GV + +V++ Sbjct: 3 LRALGRQGINTCASFGRAGLMLFHALVGIPRFRKHAPLLIKQLYSIGVLSLLIVVVSGLF 62 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L+ +GA+ L+++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 63 IGMVLGLQGYLVLNTYGADSSLGMLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 122 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +ISPR WA IS+PLLT++ I+G +IV + I F Sbjct: 123 TEQLSSMEMMAVDPLRRIISPRFWAGFISMPLLTLIFVAVGIMGGAIVGVSWKGIDSGFF 182 Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S + + +I +IK+ A + +A+ G+ S + + T VV + Sbjct: 183 WSAMQNAVDVRTDILNCVIKSAVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHASLA 242 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 243 VLGLDFVLTALMFG 256 >gi|227358279|ref|ZP_03842620.1| ABC superfamily ATP binding cassette transporter, membrane protein [Proteus mirabilis ATCC 29906] gi|227161615|gb|EEI46652.1| ABC superfamily ATP binding cassette transporter, membrane protein [Proteus mirabilis ATCC 29906] Length = 259 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 69/254 (27%), Positives = 122/254 (48%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + S S G +F+ L++Q+Y VGV + ++++ Sbjct: 5 LAQLGARSLSIFATFGRAGIMLFRALIGKPEFRKQWPLLMKQLYSVGVQSLLIIMVSGLF 64 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L+ F AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 65 IGMVLGLQGYLVLTTFSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 124 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+I ++ M +D +R +++PR WA IS+PLL+++ I G +IV + I F Sbjct: 125 TEQISSLEMMAVDPLRRVVAPRFWAGFISMPLLSLIFVAVGIWGGAIVGVDWKGIDEGFF 184 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 ++ ++ IK+ A + +A+ G+ S + + T VV S Sbjct: 185 WASMQGAVEWQKDLVNCFIKSVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLA 244 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 VLGLDFVLTALMFG 258 >gi|323491744|ref|ZP_08096921.1| hypothetical protein VIBR0546_01054 [Vibrio brasiliensis LMG 20546] gi|323314000|gb|EGA67087.1| hypothetical protein VIBR0546_01054 [Vibrio brasiliensis LMG 20546] Length = 262 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 74/254 (29%), Positives = 126/254 (49%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + S G AS + L LI+Q+Y VGV + +++L Sbjct: 8 VASVGRRALSVTESFGRASLMLFGALASKPQPIKNLPLLIKQLYTVGVQSLIIIVLSGLF 67 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V++ QG L FGAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 68 IGMVLSLQGYVILVDFGAEGALGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 127 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D ++ +I+PR WA +IS+PLL ++ I G +V + I F Sbjct: 128 TEQLSSMEMMAVDPLKRVIAPRFWAGVISMPLLVMIFMAVGIWGGQLVGVDWKGIDHGSF 187 Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S ++ L +I +IK+ A + +A+ G+ S + + T VV S Sbjct: 188 WSAMQASVELGQDIGNSMIKSIVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLA 247 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 VLGLDFVLTALMFG 261 >gi|303256383|ref|ZP_07342397.1| ABC transporter, permease protein [Burkholderiales bacterium 1_1_47] gi|331001491|ref|ZP_08325109.1| hypothetical protein HMPREF9439_02780 [Parasutterella excrementihominis YIT 11859] gi|302859874|gb|EFL82951.1| ABC transporter, permease protein [Burkholderiales bacterium 1_1_47] gi|329568220|gb|EGG50037.1| hypothetical protein HMPREF9439_02780 [Parasutterella excrementihominis YIT 11859] Length = 354 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 94/348 (27%), Positives = 162/348 (46%), Gaps = 13/348 (3%) Query: 26 DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLI 85 + + + S I D S +T D G L+ + KL VS IE L++ + Sbjct: 20 KIWEQVLGAESSGQTIFDASDLTFCDESGLTLLYELRSR-PDAFKLINVSASIETLYNTM 78 Query: 86 SFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCAS 145 K +K + +GK + + + LG + Sbjct: 79 LKNFSPKPVEKKS---------LGVVSSLGKWLYDAASSTKQSIIFLGSACCALTDVLLH 129 Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 + + ++ G V ++ LI F+ G +IA + A FGA IF ++ + I Sbjct: 130 PSQIR--FGEILSVSDEAGSRAVGIICLIGFLMGVIIAFETALVAQIFGAVIFVVNGIGI 187 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 RE+G L+TA++ AGRSGSA A++G+ K+NEE++A+ T GL + L+ PR+ A + Sbjct: 188 AMTRELGPLMTAILFAGRSGSAFAAQLGTQKVNEELNALTTFGLSPMYFLVVPRLIASSL 247 Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325 +PLL++ A I+G +V+ YDI + F+ + + T+ +I GL+KA I Sbjct: 248 VVPLLSVFATILGILGGGLVM-AMYDITYTQFYVQLLKSVTVTDIVFGLVKAVIFGFVIA 306 Query: 326 IVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 ++ + G G + ++G T VV+SI +++ID A+ +GI Sbjct: 307 LIGCQCGMNTGAGAAAVGSSTTKSVVKSIIWIVVIDGAAALLTNRLGI 354 >gi|26987695|ref|NP_743120.1| hypothetical protein PP_0959 [Pseudomonas putida KT2440] gi|24982381|gb|AAN66584.1|AE016286_8 toluene tolerance ABC efflux transporter, permease [Pseudomonas putida KT2440] Length = 266 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +++ + +LG G L +Q+Y VGV + +V++ Sbjct: 9 ERVRLLGRSAIDVLAVLGRSCLFLFHALVGRGGIGGGFQLLTKQLYSVGVLSLAIVVVSG 68 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+M Sbjct: 69 VFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 128 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +++PR+WA ISLPLL ++ + I G S V + + Sbjct: 129 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 188 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ ++ + ++ GL+K+ A +A+ +G+ S + + T VV + Sbjct: 189 SFWANMQNSVSFTDDVLNGLVKSVVFAFVSTWIAVFQGYDCEPTSEGISRATTKTVVYAS 248 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 249 LAVLGLDFILTALMFG 264 >gi|225433662|ref|XP_002265320.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 474 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 57/236 (24%), Positives = 111/236 (47%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 V G+ K ++ ++Q+ VG V V IL + G Q + ++ G Sbjct: 229 VFIMAGQVIIRILTGKVHWVNTLQQLERVGPRSVGVCILTAAFVGMAFTIQFVREFTRLG 288 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 ++++ RE+ ++T++++AGR GSA AE+G+M+++E+ D +R +G + V Sbjct: 289 LNRSVGGVLALAFSRELSPVVTSIVVAGRIGSAFAAELGTMQVSEQTDTLRVLGTNPVDY 348 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L++PR+ A I+LP LT+L + ++++ Y I + +I + + Sbjct: 349 LVTPRVIASCIALPFLTLLCFTVGMASSALLADSVYGISINIILDSAQRALNSWDIISAM 408 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 IK+ I V+ G + +G+ T+ VV S+ + I D + +F Sbjct: 409 IKSVAFGGIISTVSCAWGVTTMGGAKGVGESTTSAVVISLVGIFIADFALSYCFFQ 464 >gi|259907019|ref|YP_002647375.1| ABC transporter, permease subunit, probable toluene tolerance protein [Erwinia pyrifoliae Ep1/96] gi|224962641|emb|CAX54096.1| ABC transporter, permease subunit, probable toluene tolerance protein [Erwinia pyrifoliae Ep1/96] gi|283476814|emb|CAY72652.1| UPF0393 inner membrane protein yrbE [Erwinia pyrifoliae DSM 12163] Length = 260 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 70/256 (27%), Positives = 125/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + LG +F+ L++Q+Y +GV + +V++ Sbjct: 4 QALASLGRQGINFCASLGRAGLMLFHALFGIPRFRKHAPLLVKQLYNIGVLSLLIVVVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L +GAE ++++ LRE+G +++A++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLILKTYGAEASLGMMVALSLLRELGPVVSALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +ISPR WA IS+PLLT++ I+G ++V + I Sbjct: 124 KATEQLSSMEMMAVDPLRRIISPRFWAGFISMPLLTLIFVAVGILGGALVGVSWKGIDSG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + L +I IK+ A + +A+ G+ S + + T VV + Sbjct: 184 FFWSAMQNAVDLQTDIINCTIKSAVFAVTVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|78222008|ref|YP_383755.1| hypothetical protein Gmet_0788 [Geobacter metallireducens GS-15] gi|78193263|gb|ABB31030.1| protein of unknown function DUF140 [Geobacter metallireducens GS-15] Length = 257 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 66/263 (25%), Positives = 127/263 (48%), Gaps = 7/263 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + +G + + L + + N + + +Q++++G Sbjct: 2 LRTFLEKLGAVTIFIFREMGRMLIFLVMALVNIIIRPGRPFH-------IFKQIHFIGTK 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + V+ L + TG V+ QG + L++FG+E +++ +RE+G +LTA+M+ GR+GS Sbjct: 55 SLFVITLTASFTGMVLGLQGYYTLAKFGSEGMLGSAVALSLIRELGPVLTALMVVGRAGS 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 AI AEIG MKI E+IDA++TM L+ + LISP+I ++++PLL + + I G +V Sbjct: 115 AITAEIGIMKITEQIDAMKTMALEPFKYLISPKIVGALVAVPLLCAIFDVVGIYGGYLVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 K + +F + ++++G +K+ + V +G+ + + + Sbjct: 175 VKLLGVNPGAYFHEMERSVEWKDVWSGFVKSISFGGILAWVCCYKGYHASHGAEGVSRAT 234 Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369 T VV S +V++ D Sbjct: 235 TEAVVMSSVLVLVWDYFLTSVML 257 >gi|330446812|ref|ZP_08310463.1| mlaE [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491003|dbj|GAA04960.1| mlaE [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 260 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 78/265 (29%), Positives = 134/265 (50%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N IG+ + +L G + K F L L++Q+Y VGV Sbjct: 2 IVNAIARIGRSGIDKCQTIGRATLML------FGALVSKPQPVKMFPL-LMKQLYSVGVL 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++++ G V++ QG L+ FGAE ++++ LRE+G ++TA++ AGR+GS Sbjct: 55 SMAIILVSGLFIGMVLSLQGYIVLADFGAETSLGQMVALSLLRELGPVVTALLFAGRAGS 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+PLL ++ + + GA IV Sbjct: 115 ALTAEIGLMKATEQLSSMEMMAVDPLRRVIAPRFWAGVISMPLLALMFSVVGLWGAQIVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + I + F+S S+ + +I +IKA A + +A+ G+ S + + Sbjct: 175 VDWKGIDYGSFWSVMQSSVNFSYDIGNSIIKAVVFAITVTWIAVFNGYDAVPTSEGISRA 234 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV S V+ +D + F Sbjct: 235 TTRTVVNSSLAVLGLDFILTALMFG 259 >gi|261344896|ref|ZP_05972540.1| toluene tolerance ABC efflux transporter, permease [Providencia rustigianii DSM 4541] gi|282567036|gb|EFB72571.1| toluene tolerance ABC efflux transporter, permease [Providencia rustigianii DSM 4541] Length = 260 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 75/256 (29%), Positives = 122/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K I F G +F L++Q+Y VGV + +V + Sbjct: 4 KAIAAFGRRWIETFAAFGRAGYMLFRALFGKPEFAKQWPLLMQQLYSVGVQSLLIVAVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ F AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLVLTTFSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +I+PR WA IS+PLL+++ IIG +IV + I Sbjct: 124 KATEQISSLEMMAVDPLRRVIAPRFWAGFISMPLLSLIFVAVGIIGGAIVGVDWKGIDPG 183 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S S+ +I IK+ A + +A+ G+ S + + T VV + Sbjct: 184 FFWSSMQSSIEWRLDIVNCFIKSLVFAITVTWIALFNGYDAIPTSEGISRATTKTVVHAS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LSVLGLDFVLTALMFG 259 >gi|261819643|ref|YP_003257749.1| hypothetical protein Pecwa_0289 [Pectobacterium wasabiae WPP163] gi|261603656|gb|ACX86142.1| protein of unknown function DUF140 [Pectobacterium wasabiae WPP163] Length = 260 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 66/256 (25%), Positives = 123/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + S + G +F+ L++Q+Y VGV + ++++ Sbjct: 4 RTLASLGRQGISASAAFGRAGLMLFNALVGKPEFRKQWPLLVKQLYSVGVQSLLIIMVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYIILTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +++PR WA +IS+PLL ++ I G ++V + I Sbjct: 124 KATEQLSSMEMMAVDPLRRVVAPRFWAGLISMPLLAVIFVAVGIWGGALVGVDWKGIDSG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ +IK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQGAVDWRQDVLNCVIKSIVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|297537487|ref|YP_003673256.1| hypothetical protein M301_0292 [Methylotenera sp. 301] gi|297256834|gb|ADI28679.1| protein of unknown function DUF140 [Methylotenera sp. 301] Length = 268 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 78/273 (28%), Positives = 139/273 (50%), Gaps = 8/273 (2%) Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 +S S IG ++V+ I + A + L I +GE +R+ Sbjct: 3 KSNPLVSIIKTLQGIGHRMVERIWRLGAGARLFFLTIVYSGESFKR-------FHLTMRE 55 Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219 +Y GV + ++I+ +F G V+A QG L ++G+ L+S+ +RE+G ++TA++ Sbjct: 56 IYSTGVMSLLIIIVSAFFVGMVLALQGYNTLQKYGSSEAIGVLVSLSLVRELGPVVTALL 115 Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279 AGR+G+AI AEIG MK E++ A+ M ++ + +++PR WA +IS+P+L L + I Sbjct: 116 FAGRAGTAITAEIGLMKTTEQLSAMEMMAVNPIARVVAPRFWAGVISMPILATLFSMVGI 175 Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 +G IV + F+S+ ++ ++I G+IK+ A ++A+ EGF Sbjct: 176 LGGYIVAVPLIGVDEGAFWSQMQASVDFQSDIVNGIIKSLVFGVACTMIALFEGFDAPPT 235 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 + + + T VV S V+ +D + F I Sbjct: 236 AEGVSRATTRTVVISSLTVLGLDFVLTSFMLVI 268 >gi|291615986|ref|YP_003518728.1| YrbE [Pantoea ananatis LMG 20103] gi|291151016|gb|ADD75600.1| YrbE [Pantoea ananatis LMG 20103] gi|327396238|dbj|BAK13660.1| inner membrane protein YrbE [Pantoea ananatis AJ13355] Length = 260 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 68/256 (26%), Positives = 122/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K + G F+ LI+Q+Y +GV + ++++ Sbjct: 4 KALASLGRRGIGTCASFGRAGLMLFHALVGKPAFRKHFPLLIKQLYSIGVLSLVIIVVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ +GAE L+++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLVLTTYGAETSLGMLVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R ++SPR WA IS+PLL ++ I G ++V + I Sbjct: 124 KATEQLSSMEMMAVDPLRRVVSPRFWAGFISMPLLALIFTAVGITGGALVGVSWKGIDPG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + +++ +IK+ A + +A+ G+ S + + T VV + Sbjct: 184 FFWSAMQNAVDFRSDVVNCIIKSAVFAVTVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|226943414|ref|YP_002798487.1| organic solvent tolerance ABC efflux transporter, permease [Azotobacter vinelandii DJ] gi|226718341|gb|ACO77512.1| organic solvent tolerance ABC efflux transporter, permease component [Azotobacter vinelandii DJ] Length = 265 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 68/260 (26%), Positives = 132/260 (50%), Gaps = 1/260 (0%) Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171 + +++ + LG G L++Q++ +GV +P++ Sbjct: 4 RSLFEQVGLLGRAAIDVIEALGRSALFLMHATFGRSGAGGGFQLLVKQIHSIGVLSLPII 63 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 ++ G V+A QG L +G+E L+++ LRE+G ++T ++ AGR+GSA+ AE Sbjct: 64 VVSGLFIGMVLALQGYNILVSYGSEQAVGQLVALTLLRELGPVVTGLLFAGRAGSALTAE 123 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 IG+MK E++ ++ +G+D ++ +I+PR+WA +S+PLL + N I GA++V + Sbjct: 124 IGNMKSTEQLSSLEMIGVDPLKYIIAPRLWAGFLSMPLLAAIFNVVGIWGAAMVAVDWLG 183 Query: 292 IPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 + F++ S+ L ++ G IK+ A + +A+ +G+ S +G+ T V Sbjct: 184 VYDGSFWASMQSSVDLYDDVVNGAIKSIAFAFVVTWIAVFQGYDCEPTSEGIGRATTRTV 243 Query: 351 VQSISIVIIIDSLFAIFYFA 370 V + V+ +D + F Sbjct: 244 VYASLAVLGLDFILTALMFG 263 >gi|313497328|gb|ADR58694.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1] Length = 265 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +++ + +LG G L +Q+Y VGV + +V++ Sbjct: 8 ERVRLLGRSAIDVLAVLGRSCLFLFHALVGRGGIGGGFQLLTKQLYSVGVLSLAIVVVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+M Sbjct: 68 VFIGMVLALQGYSILAKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +++PR+WA ISLPLL ++ + I G S V + + Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 187 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ ++ + ++ GL+K+ A +A+ +G+ S + + T VV + Sbjct: 188 SFWANMQNSVSFTDDVLNGLVKSLVFAFVSTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|148977765|ref|ZP_01814321.1| putative ABC superfamily transport protein [Vibrionales bacterium SWAT-3] gi|145962979|gb|EDK28249.1| putative ABC superfamily transport protein [Vibrionales bacterium SWAT-3] Length = 259 Score = 233 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 75/258 (29%), Positives = 128/258 (49%), Gaps = 2/258 (0%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 I K I + + G + K F L L++Q+Y VGV + ++++ Sbjct: 2 IAKTIAGVGKRTLAICESFGRASLMLFGALFGIPRLKNFPL-LVKQLYSVGVQSLAIILV 60 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 G V++ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG Sbjct: 61 SGLFIGMVLSLQGYVVLIDYGAEGNLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIG 120 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 MK E+I ++ M +D ++ +I+PR+WA +IS+PLL ++ I G +V + I Sbjct: 121 LMKATEQISSLEMMAVDPLKRIIAPRLWAGLISMPLLAMIFMAVGIWGGQLVGVDWKGID 180 Query: 294 FAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 F+S S+ L +I +IK A + +A+ G+ S + + T VV Sbjct: 181 HGSFWSAMQSSVELGRDIGNSMIKCMVFAITVTWIALFNGYDAVPTSEGISQATTRTVVH 240 Query: 353 SISIVIIIDSLFAIFYFA 370 S V+ +D + F Sbjct: 241 SSLAVLGLDFVLTALMFG 258 >gi|322834661|ref|YP_004214688.1| hypothetical protein Rahaq_3972 [Rahnella sp. Y9602] gi|321169862|gb|ADW75561.1| protein of unknown function DUF140 [Rahnella sp. Y9602] Length = 260 Score = 233 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 122/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K + + G +F LI+Q+Y VGV + ++++ Sbjct: 4 KALASVGRRGINTCASFGRAGLMLFRALVGKPQFAKQWPLLIKQLYSVGVLSLLIILVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AE+G M Sbjct: 64 LFIGMVLGLQGYLILTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAELGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +++PR WA +IS+PLLT + + G S+V + I Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGVWGGSLVGVDWKGIDSG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQTAVDWRTDLLNCLIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|318604041|emb|CBY25539.1| uncharacterized ABC transporter, permease component YrbE [Yersinia enterocolitica subsp. palearctica Y11] Length = 260 Score = 233 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + G + + L++Q+Y VGV + ++++ Sbjct: 4 QALASLGRRGINVCASFGRAGLMLFNALVGRPEPRKQWPLLVKQLYSVGVQSLLIIVVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++S+ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +++PR WA +IS+PLLT + I G S+V + I Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDGG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S S ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQSAVEWRTDLLNCLIKSLVFAITVMWIALFNGYDAVPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|254362425|ref|ZP_04978534.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica PHL213] gi|261494094|ref|ZP_05990597.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496065|ref|ZP_05992475.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|153094014|gb|EDN74930.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica PHL213] gi|261308315|gb|EEY09608.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261310260|gb|EEY11460.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 258 Score = 233 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 76/264 (28%), Positives = 132/264 (50%), Gaps = 7/264 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N IG ++ FI A +L G +F+ LI+Q+Y +GV Sbjct: 1 MVNFISSIGAVVINFIRTLGRSAFMLW------GALIGKP-EFRKHTPLLIKQLYVLGVQ 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + +++L G V+ QG L F AE L+S+ LRE+G ++TA++ AGR+GS Sbjct: 54 SLLIIMLSGLFIGMVLGLQGYVVLVDFAAESSLGTLVSLSLLRELGPVVTALLFAGRAGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+P+L + I G S+V Sbjct: 114 ALTAEIGLMKATEQLSSLEMMAVDPLRRIIAPRFWAGVISMPVLAAIFTAIGIWGGSLVG 173 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + + F+S ++ +++ G IK+ A A+ +A+ G+ S + + Sbjct: 174 VDWKGVDGGSFWSVMQNSVNTSDLINGFIKSVIFAFAVVWIALFNGYDCVPTSEGISQAT 233 Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370 T VV + +++ +D + F Sbjct: 234 TRTVVNASLVILGLDFILTAIMFG 257 >gi|91791861|ref|YP_561512.1| hypothetical protein Sden_0497 [Shewanella denitrificans OS217] gi|91713863|gb|ABE53789.1| protein of unknown function DUF140 [Shewanella denitrificans OS217] Length = 265 Score = 233 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 73/269 (27%), Positives = 134/269 (49%), Gaps = 8/269 (2%) Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162 + N +G+ + F+ +L + + + L++Q+Y Sbjct: 3 KMSQLLNQIALVGQSAIAFMRGFGKAGLMLWGALFHI-------PNVRKGGPLLLKQIYV 55 Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 +GV + ++I+ G V+A QG L FG E ++++ LRE+G ++TA++ AG Sbjct: 56 LGVRSMIIIIVSGLFIGMVMALQGYNVLVGFGTEESLGPMVALSLLREMGPVVTALLFAG 115 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 R+GSA+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+PLL ++ + I G Sbjct: 116 RAGSALTAEIGLMKSTEQLSSLEMMAIDPLRQVIAPRFWAGVISMPLLAVMFSLVGIYGG 175 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341 +V ++ I F+S ++ +I LIK+ A + +A+ G+ V + Sbjct: 176 HLVGVEWKGIDSGTFWSILQASIEWRQDIVNCLIKSTVFAVVVTWIALYRGYEVNPNPEG 235 Query: 342 LGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T+ VVQ+ V+ +D L F Sbjct: 236 ISRATTSTVVQASLAVLGLDFLLTAIMFG 264 >gi|120602860|ref|YP_967260.1| hypothetical protein Dvul_1816 [Desulfovibrio vulgaris DP4] gi|120563089|gb|ABM28833.1| protein of unknown function DUF140 [Desulfovibrio vulgaris DP4] Length = 267 Score = 233 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 72/243 (29%), Positives = 128/243 (52%), Gaps = 5/243 (2%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + + + L ++ Q+Y +G + V++LI TG V+ QG + L Sbjct: 25 LGAMFIFMLDGFRHIFASTKQLPKIVNQVYVIGYKSLFVILLIGIFTGMVLGLQGYYTLV 84 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 +FG+E +++ +RE+G +LTA+M+ GR+GS++ AEIG M+I ++IDA+ M ++ Sbjct: 85 KFGSEGLLGAAVALTLIRELGPVLTAIMVTGRAGSSMAAEIGVMRITDQIDALDVMDINP 144 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 + L+SPRI A +++ PLLT L + IIG + I V+F R ++ LA++ Sbjct: 145 MGYLVSPRIAASLVAFPLLTALFDVIGIIGGYVTGVMLLGINEGVYFHRIATSVELADVT 204 Query: 312 TGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 G +K+ A + V+ +G+ G+ + T+ VV S +V++ D + Sbjct: 205 GGFMKSLLFALIVSTVSCYQGYFTHMRRDGMGPEGVSNSTTSAVVMSCVLVLVADYVLTS 264 Query: 367 FYF 369 F Sbjct: 265 FLL 267 >gi|238751354|ref|ZP_04612847.1| hypothetical protein yrohd0001_15400 [Yersinia rohdei ATCC 43380] gi|238710412|gb|EEQ02637.1| hypothetical protein yrohd0001_15400 [Yersinia rohdei ATCC 43380] Length = 260 Score = 233 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 121/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + G + + L++Q+Y VGV + ++++ Sbjct: 4 QALASLGRRGIKVCASFGRAGLMLFNALVGRPEPRKQWPLLVKQLYSVGVQSLLIIVVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGFLILTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +++PR WA +IS+PLLT + I G ++V + I Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGAVVGVDWKGIDGG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQNAVEWRTDLLNCLIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|260914439|ref|ZP_05920908.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Pasteurella dagmatis ATCC 43325] gi|260631540|gb|EEX49722.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Pasteurella dagmatis ATCC 43325] Length = 260 Score = 233 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 72/265 (27%), Positives = 129/265 (48%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + +G+ + F +L G + K L++Q++ +GV Sbjct: 1 MIDFISQLGRSAIDFCRSLGRAGFML------FGALVGKP-QIKKHFPLLVKQLHVLGVQ 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + +++L G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GS Sbjct: 54 SLLIIMLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+P+L ++ I G S+V Sbjct: 114 ALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPILAVIFTAIGIWGGSLVG 173 Query: 287 WKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + + F+S + T ++ G IK+ A A+ +A+ G+ S + K Sbjct: 174 VDWKGVDSGSFWSVMQNAVTWEKDLLNGFIKSLCFAIAVVWIALFNGYDCLPTSEGISKA 233 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + +V+ +D + F Sbjct: 234 TTRTVVHASLVVLGLDFVLTALMFG 258 >gi|172039649|ref|YP_001806150.1| hypothetical protein cce_4736 [Cyanothece sp. ATCC 51142] gi|171701103|gb|ACB54084.1| DUF140-containing protein [Cyanothece sp. ATCC 51142] Length = 263 Score = 233 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 68/248 (27%), Positives = 116/248 (46%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 L + G+ K K + + QM VG V + ++ + G V Sbjct: 9 RGLGIWFERLVAAVLLGGQVFFHLLKTKIHRRNTLEQMSVVGPESVTIALITAGFVGMVF 68 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 Q A + FGA ++++ RE+ +LTAV++AGR GSA AEIG+M++ E+ID Sbjct: 69 TIQVAREFISFGAASTVGGVLALALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQID 128 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ + D + L+ PR+ A + LP+L IL+ + + G ++ YDI VF + Sbjct: 129 ALYMLKTDPIDYLVVPRVLACCLMLPVLNILSLLTGMTGGLLIANGLYDISPYVFLTSVR 188 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + L ++ T +IK+ I ++ G + +G+ TT VV S+ V +I+ Sbjct: 189 NFLELWDLVTSMIKSVAFGGLIAVIGCSWGLTTTGGAKGVGQSTTTAVVTSLLAVFVINF 248 Query: 363 LFAIFYFA 370 + F Sbjct: 249 FLSWVMFQ 256 >gi|317494033|ref|ZP_07952449.1| hypothetical protein HMPREF0864_03218 [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917806|gb|EFV39149.1| hypothetical protein HMPREF0864_03218 [Enterobacteriaceae bacterium 9_2_54FAA] Length = 260 Score = 233 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 72/255 (28%), Positives = 121/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + F + G +F L +Q+Y VGV + ++I+ Sbjct: 5 ALASFGRRGINVCASFGRAGLMMFNALIGKPEFAKQWPLLRKQLYSVGVQSLLIIIVSGL 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 65 FIGMVLGLQGYLILTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSAVTAEIGLMK 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E+I ++ M +D +R +++PR WA IIS+PLLT + I G S+V + I Sbjct: 125 ATEQISSMEMMAVDPLRRIVAPRFWAGIISMPLLTAIFVAVGIWGGSVVGVDWKGIDSGF 184 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S + ++ +IK+ A I +A+ G+ S + + T VV S Sbjct: 185 FWSAMQGSVDFHTDLVNCMIKSVVFAITIMWIALFNGYDAIPTSEGISRATTRTVVHSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|157372592|ref|YP_001480581.1| hypothetical protein Spro_4359 [Serratia proteamaculans 568] gi|157324356|gb|ABV43453.1| protein of unknown function DUF140 [Serratia proteamaculans 568] Length = 260 Score = 233 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 68/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + + G + + L++QM+ VGV + ++++ Sbjct: 4 QALASLGRRGINTSASFGRAGLMLWGALVGRPEPRKQWPLLLKQMHSVGVQSLLIIMVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +++PR WA +IS+PLLT++ I G SIV + I Sbjct: 124 KATEQISSLEMMAVDPLRRIVAPRFWAGLISMPLLTLIFVAIGIWGGSIVGVDWKGIDGG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ L+K+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQGAVEWKKDLLNCLLKSVVFAITVTWIAIFNGYDAVPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|114328116|ref|YP_745273.1| ABC transporter permease [Granulibacter bethesdensis CGDNIH1] gi|114316290|gb|ABI62350.1| ABC transporter permease protein [Granulibacter bethesdensis CGDNIH1] Length = 392 Score = 233 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 86/375 (22%), Positives = 166/375 (44%), Gaps = 16/375 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 SE + +G W + + ++ ++D+SA+ D+ + Sbjct: 31 SEGMVATLSLSGEWTVASGGLNTRPINAF---PVGTERLLIDVSALQRWDSALISFLWSL 87 Query: 62 MEKYHG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ + + + L +L+ + IG Sbjct: 88 EQRCNTSGITLDNSTLPHSARGLLALLPEHPHPSAPAPAKHFAP--------VQAIGAST 139 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + + + + + + G + + L+R + G S + +V +++F+ Sbjct: 140 LSMLTECGTVTELGVETLRGAGATLFGGHGMR--WRDLLRDISDAGPSALLIVGIVNFLM 197 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G+++A GA QL +F A+I+ +L+ + +RE+ ++TA+++AGR+G A A I +M N Sbjct: 198 GSILAFVGAVQLRKFAADIYVANLVGLASVREMSAVMTAIIMAGRTGGAYAARIATMTGN 257 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+R G+ R L+ P I AL++++P+L + A +++G IV D+ A F+ Sbjct: 258 EEIDALRVFGIPVSRYLLLPSIAALVLTMPILYLYACLISLVGGYIVSQGMLDVTMAGFW 317 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + + + G +K A IG+V+ + G G + +G T VV I VI Sbjct: 318 NHLFGSVHIDQFVFGFVKTITFAMLIGLVSCRIGLKAGRSAADVGVAATRAVVSGIVGVI 377 Query: 359 IIDSLFAIFYFAIGI 373 +DS+FA+ IGI Sbjct: 378 ALDSMFAVLATIIGI 392 >gi|91225579|ref|ZP_01260653.1| putative ABC superfamily transport protein [Vibrio alginolyticus 12G01] gi|269967998|ref|ZP_06182036.1| conserved hypothetical protein [Vibrio alginolyticus 40B] gi|91189699|gb|EAS75973.1| putative ABC superfamily transport protein [Vibrio alginolyticus 12G01] gi|269827355|gb|EEZ81651.1| conserved hypothetical protein [Vibrio alginolyticus 40B] Length = 263 Score = 233 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 74/268 (27%), Positives = 134/268 (50%), Gaps = 8/268 (2%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 ++F + +G++ + +L G + + F L L++Q+Y V Sbjct: 2 VDNFIHFVASLGRRTLSICGAFGRATFML------IGALFSKPQPIRSFPL-LVKQLYSV 54 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 GV + ++++ G V++ QG L +GAE ++++ LRE+G ++TA++ AGR Sbjct: 55 GVQSLAIIVVSGLFIGMVLSLQGYVVLVDYGAEGSLGQMVALSLLRELGPVVTALLFAGR 114 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 +GSA+ AEIG MK E++ ++ M +D ++ +I+PR WA +IS+PLL ++ I GA Sbjct: 115 AGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGAQ 174 Query: 284 IVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 +V + + F+S S+ L +I +IK A + VA+ G+ S + Sbjct: 175 LVGVDWKGVDHGSFWSAMQSSVELGQDIGNSMIKCFAFAITVTWVALFNGYDAIPTSEGI 234 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + T VV S V+ +D + F Sbjct: 235 SRATTRTVVHSSLAVLGLDFVLTALMFG 262 >gi|331011542|gb|EGH91598.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 265 Score = 233 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 66/255 (25%), Positives = 132/255 (51%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 ++ + +LG L+RQ+Y VGV + ++++ Sbjct: 9 RVRLLGRSAIDIVTVLGRSGLFLVNALLGRGGGGSSFQLLVRQLYSVGVMSLVIIVVSGM 68 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+MK Sbjct: 69 FIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNMK 128 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ +G+D ++ +++PR+WA IS+P+L ++ + I GAS V + + Sbjct: 129 STEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFSVVGIWGASWVAIDWLGVYDGS 188 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ + ++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 189 FWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCEPTSEGISRATTRTVVYASL 248 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 249 AVLGLDFILTALMFG 263 >gi|163803754|ref|ZP_02197611.1| putative ABC superfamily transport protein [Vibrio sp. AND4] gi|159172438|gb|EDP57307.1| putative ABC superfamily transport protein [Vibrio sp. AND4] Length = 263 Score = 233 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 74/268 (27%), Positives = 130/268 (48%), Gaps = 8/268 (2%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 +S +G++ + +L G K L LI+Q+Y V Sbjct: 2 VDSVIQFVASLGRRTLDICEAFGRATLML------IGALVTRPQPIKN-LPFLIKQLYSV 54 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 GV + ++I+ G V++ QG L +GAE ++++ LRE+G ++TA++ AGR Sbjct: 55 GVQSLAIIIVSGLFIGMVLSLQGYIVLVDYGAEGSLGQMVALSLLRELGPVVTALLFAGR 114 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 +GSA+ AEIG MK E++ ++ M +D ++ +I+PR WA IS+PLL ++ I GA Sbjct: 115 AGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGAISMPLLAMIFMAVGIWGAQ 174 Query: 284 IVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 +V + + + F++ S+ L +I +IK A + +A+ G+ S + Sbjct: 175 LVGVDWKGVDYGSFWAAMQSSVELGQDIGNSMIKCIVFAITVTWIALFNGYDAIPTSEGI 234 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + T VV S V+ +D + F Sbjct: 235 SRATTRTVVHSSLAVLGLDFVLTALMFG 262 >gi|15602040|ref|NP_245112.1| hypothetical protein PM0175 [Pasteurella multocida subsp. multocida str. Pm70] gi|12720395|gb|AAK02259.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 261 Score = 233 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 71/254 (27%), Positives = 128/254 (50%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + + + S +G +++ LI+Q++ +GV + +++L Sbjct: 5 ISELGHHAISSCRAIGRAGFMLFGALIGKPQWRKHTPLLIKQLHVLGVQSLLIIMLSGLF 64 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 65 IGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 124 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +I+PR WA +I++P+L I+ I G S+V + + F Sbjct: 125 TEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPILAIIFTAIGIWGGSLVGVDWKGVDAGSF 184 Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S + T ++ G IK+ A A+ +A+ G+ S + K T VV + + Sbjct: 185 WSVMQNAVTWEKDLLNGFIKSLCFAIAVVWIALFNGYDCIPTSEGISKATTRTVVHASLV 244 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 VLGLDFVLTALMFG 258 >gi|116789794|gb|ABK25388.1| unknown [Picea sitchensis] Length = 462 Score = 233 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 54/232 (23%), Positives = 115/232 (49%) Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198 G+ A +K K + ++Q+ VG V +L + G Q + ++ G Sbjct: 220 AGQVIARVFKGKIHTRNTLQQLEVVGPGSSGVCLLTAAFVGMAFTIQFVREFTRLGLTRS 279 Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258 ++++ RE+ ++T+++IAGR GSA AE+G+M+++E+ D +R +G D V LI P Sbjct: 280 VGGVLALAFSRELSPVVTSIIIAGRVGSAFAAELGTMQVSEQTDTLRVLGTDPVDYLIIP 339 Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318 R+ A ++LP+LT++ ++ + ++ Y++ + + +I + ++K+ Sbjct: 340 RVIACCLALPILTLICFSVSLAASVLLADGVYNVSANIILESARRSLHPWDIISAMVKST 399 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 I +++ G + +G+ T+ VV S+ + I D + + +F Sbjct: 400 VFGGLISVISCAWGVTTLGGAKGVGESTTSAVVISLVCIFIADFILSWCFFQ 451 >gi|22298988|ref|NP_682235.1| hypothetical protein tlr1445 [Thermosynechococcus elongatus BP-1] gi|22295170|dbj|BAC08997.1| ycf63 [Thermosynechococcus elongatus BP-1] Length = 267 Score = 233 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 71/251 (28%), Positives = 122/251 (48%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + + LG + G+ + + L +LI QM VG + + V ++ + G Sbjct: 8 RLRWRASQGVQRLGTALLLGGQVIYRVLRGRIALRNLIEQMALVGPASLSVALITAAFVG 67 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V Q A + FGA +++I RE+G +LTAV++AGR GSA AEIG+MK+ E Sbjct: 68 MVFTIQVAREFIAFGATSAVGGVLAIALARELGPVLTAVVLAGRVGSAFAAEIGTMKVTE 127 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +IDA+ +G + V L+ PR A ++ LP+L ILA + + G I+ Y IP V+ Sbjct: 128 QIDALYMLGTNPVDYLVVPRFIACVVMLPILNILALVTGLWGGLIIGDYLYGIPPGVYIE 187 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 + ++++ +IK+ + I+ G + +G+ T VV S+ + I Sbjct: 188 SIQNFLQTWDLWSSIIKSGIFGGVVAIIGCSWGITTTGGAKGVGQSTTAAVVISLLAIFI 247 Query: 360 IDSLFAIFYFA 370 ++ + F Sbjct: 248 LNFFLSWALFG 258 >gi|4336799|gb|AAD17958.1| toluene tolerance protein Ttg2B [Pseudomonas putida] Length = 265 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +++ + +LG G L +Q+Y VGV + ++++ Sbjct: 8 ERVRLLGRSAIDVLAVLGRSCLFLFHALIGRGGIGGGFQLLTKQLYSVGVLSLAIIVVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+M Sbjct: 68 VFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +++PR+WA ISLPLL ++ + I G S V + + Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 187 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ ++ + ++ GLIK+ A +A+ +G+ S + + T VV + Sbjct: 188 SFWANMQNSVSFTDDVLNGLIKSLVFAFVTTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|284008692|emb|CBA75353.1| conserved hypothetical protein [Arsenophonus nasoniae] Length = 261 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 71/254 (27%), Positives = 121/254 (47%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + S + G +F LI+Q+Y VG+ + ++ + Sbjct: 7 LTALGRRSLAVVATFGRAGYLLFRALFGKPEFAKQWPLLIKQLYNVGILSLLIIAVSGLF 66 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L+ F AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 67 IGMVLGLQGYLVLTMFSAESSLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 126 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+I ++ M +D +R +I+PR WA +IS+PLL ++ I+G ++V + I F Sbjct: 127 TEQISSLEMMAVDPLRRVIAPRFWAGLISMPLLALIFVAVGILGGALVGVDWKGIDEGFF 186 Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S S +I IK+ A + +A+ G+ S + + T VV S Sbjct: 187 WSSMQSAIEWKKDILNCFIKSVVFAFTVSWIALFNGYDAIPTSEGISRATTRTVVHSSLA 246 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 247 VLGLDFVLTALMFG 260 >gi|293394224|ref|ZP_06638524.1| toluene tolerance ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] gi|291423202|gb|EFE96431.1| toluene tolerance ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] Length = 260 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + F + + G + + L++Q++ VGV + ++++ Sbjct: 4 QALASFGRRGINTSAAFGRAGLMLWGALVGRPEPRRQWPLLVKQLHSVGVQSLLIIMVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R + +PR WA +IS+PLLTI+ I G S+V + I Sbjct: 124 KATEQISSLEMMAVDPLRRIAAPRFWAGLISMPLLTIIFVAVGIWGGSVVGVDWKGIDSG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQGAVEWRQDLLNCLIKSVVFAITVTWIAIFNGYDAVPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|253997969|ref|YP_003050032.1| hypothetical protein Msip34_0256 [Methylovorus sp. SIP3-4] gi|253984648|gb|ACT49505.1| protein of unknown function DUF140 [Methylovorus sp. SIP3-4] Length = 263 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 70/266 (26%), Positives = 134/266 (50%), Gaps = 8/266 (3%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 N + +G +I+ + S A + +GE + IR++Y+ Sbjct: 2 LNRLAEVLRGMGHRIIDRVWRLGSGARFFVYTLIYSGESFRRIH-------LTIREIYFT 54 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 GV + ++++ +F G V+A QG L ++G+ L+++ +RE+G ++TA++ AGR Sbjct: 55 GVMSLLIILVSAFFVGMVLALQGYNTLQKYGSSEAIGVLVALSLVRELGPVVTALLFAGR 114 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 +G+AI AEIG MK E++ A+ M + + +++PR WA ++S+PLL L + ++G Sbjct: 115 AGTAITAEIGLMKTTEQLSAMEMMAVSPIARVVAPRFWAGVVSMPLLAALFSMVGVLGGY 174 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 +V + F+S+ ++ +I G+IK+ A ++A+ EGF + + Sbjct: 175 LVAVPVIGVDNGAFWSQMQASVDFQADIVNGVIKSVVFGVACTMIALFEGFDAPPTAEGV 234 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFY 368 + T VV S V+ +D + F Sbjct: 235 SRATTRTVVNSSLAVLGLDFILTSFM 260 >gi|119776212|ref|YP_928952.1| hypothetical protein Sama_3080 [Shewanella amazonensis SB2B] gi|119768712|gb|ABM01283.1| putative membrane protein [Shewanella amazonensis SB2B] Length = 260 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 76/255 (29%), Positives = 130/255 (50%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + + +Q +G S K + L++Q+Y VGV + ++++ Sbjct: 6 AVARLGRGAINQVAGMGRAGVMLWGAIFSVPKPQKGFPLLVKQLYVVGVQSLIIILVSGL 65 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L FG E ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 FIGMVLALQGYTILVDFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 125 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +I+PR WA +IS+PLL ++ I G IV ++ I Sbjct: 126 STEQLSSLEMMAVDPLRQIIAPRFWAGVISMPLLALMFTAVGIWGGHIVGVEWKGIDNGA 185 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ +I LIK+ A + +A+ G+ V + + K T+ VVQS Sbjct: 186 FWSILQASVEWRQDIVNCLIKSLVFAVVVTWIALYRGYEVVPNPEGISKATTSTVVQSSL 245 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D L F Sbjct: 246 AVLALDFLLTALMFG 260 >gi|283853085|ref|ZP_06370341.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B] gi|283571552|gb|EFC19556.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B] Length = 274 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 79/273 (28%), Positives = 134/273 (49%), Gaps = 5/273 (1%) Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY 161 N+ + I S LG + G+ +++Q+Y Sbjct: 2 PRPNTMTQALALLLSPIAALGRAVLSLVAELGGLCIFMGKGLWRIVFPSPAWRKIVQQVY 61 Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221 ++GV V V++LI TG V+ QG + L +FG+E +++ +RE+G +LTA+MI Sbjct: 62 FIGVKSVFVIVLIGLFTGMVLGLQGYYTLVKFGSEGLLGAAVALSIIRELGPVLTAIMIT 121 Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281 GR+GS++ AEIG M+I+E+IDA+ TMG++ +R LI+PR+ A ++ PLLT + + I G Sbjct: 122 GRAGSSMAAEIGIMRISEQIDALSTMGINPLRFLIAPRLAASLVCFPLLTAIFDVVGIGG 181 Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----G 336 + I V+F R ST L ++ G +K+ A + + EG+ G Sbjct: 182 GYLTGVVLLGINPGVYFDRIDSTVELGDVTGGFVKSLVFALLVAAICCFEGYFTHTRREG 241 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + + T+ VV S +++ D + F Sbjct: 242 FGAKGVSLATTSAVVLSCITILVADYVLTSFLL 274 >gi|195952743|ref|YP_002121033.1| protein of unknown function DUF140 [Hydrogenobaculum sp. Y04AAS1] gi|195932355|gb|ACG57055.1| protein of unknown function DUF140 [Hydrogenobaculum sp. Y04AAS1] Length = 246 Score = 233 bits (595), Expect = 4e-59, Method: Composition-based stats. Identities = 71/243 (29%), Positives = 123/243 (50%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + LG +K + + + ++ Y+G VPVV+ S TG V+A Sbjct: 1 MVEFINALGEAFYIFLTALLHIFKDRPKIRHFVDRVIYIGADTVPVVVTTSLFTGGVLAL 60 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q L +F +E L+++ RE+G +LT++M+ R GSAI A IG+MK+ E+IDA+ Sbjct: 61 QTYSTLHKFNSEYLIGALVALSMGRELGPVLTSLMVVARVGSAITASIGTMKVTEQIDAL 120 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 T+ ++ + SP ++A ++ LPLLTIL++ S IIG +V + + +++ + Sbjct: 121 ETLAINPYAYITSPILFACMVDLPLLTILSDISGIIGGYLVSTIIFHVNGHMYWDKTKEI 180 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +I+ GL KA I V+ GF + +G+ T+ VV S +++I+D Sbjct: 181 VDFYDIYGGLYKAFVYGIVIATVSNYFGFKTSGGNQGVGRATTSSVVISSMLILILDYFL 240 Query: 365 AIF 367 Sbjct: 241 TAI 243 >gi|240948315|ref|ZP_04752701.1| permease [Actinobacillus minor NM305] gi|240297354|gb|EER47895.1| permease [Actinobacillus minor NM305] Length = 258 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 77/264 (29%), Positives = 133/264 (50%), Gaps = 7/264 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N IGK + I A +L G +F+ LI+Q+Y VGV Sbjct: 1 MINFINQIGKTTIDIIRAFGRSAFMLW------GALIGKP-QFRKHSPLLIKQLYVVGVQ 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + +++L G V+ QG L F AE L+S+ LRE+G ++TA++ AGR+GS Sbjct: 54 SLLIIMLSGLFIGMVLGLQGYVVLVDFAAETSLGTLVSLSLLRELGPVVTALLFAGRAGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+P+L ++ I G S+V Sbjct: 114 ALTAEIGLMKATEQLSSLEMMAVDPLRRIIAPRFWAGVISMPILAVIFTAIGIWGGSLVG 173 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + + F+S ++ + +++ G IK+ A A+ +A+ G+ S + + Sbjct: 174 VDWKGVDSGSFWSVMQNSVSASDLINGFIKSIIFAFAVVWIALFNGYDSTATSEGISQAT 233 Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370 T VV + +++ +D + F Sbjct: 234 TKTVVNASLVILGLDFILTAIMFG 257 >gi|163783076|ref|ZP_02178071.1| hypothetical protein HG1285_00835 [Hydrogenivirga sp. 128-5-R1-1] gi|159881756|gb|EDP75265.1| hypothetical protein HG1285_00835 [Hydrogenivirga sp. 128-5-R1-1] Length = 248 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 69/236 (29%), Positives = 117/236 (49%), Gaps = 4/236 (1%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 L + K + F I Q Y+ VV++ S TG VIA Q +F Sbjct: 17 LALQAVYFLFKKPPKVRHF----IDQFTYIAAETSLVVLVTSTFTGGVIALQTYSTFHRF 72 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 AE ++++ RE+G +LT++M+ R GSA+ A IG+M+I ++IDA+ M ++ VR Sbjct: 73 NAEYLIGAVVALSMGRELGPVLTSLMVVARVGSAMTANIGTMRITQQIDALEVMAVNPVR 132 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 L++PRI+A + +PLLTI++N + + G +V K + + +++ + +I G Sbjct: 133 YLVTPRIFATTVGVPLLTIVSNVAGMFGGWLVATKLFKVNEYLYWQKMIDLTEFYDIVGG 192 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 L KA I V+ GF + +G+ T VV + +++I D F Sbjct: 193 LYKAFVFGFIIAAVSCYFGFYTRGGTEGVGRSTTNSVVTASMLILITDYFLTAIIF 248 >gi|116619717|ref|YP_821873.1| hypothetical protein Acid_0582 [Candidatus Solibacter usitatus Ellin6076] gi|116222879|gb|ABJ81588.1| protein of unknown function DUF140 [Candidatus Solibacter usitatus Ellin6076] Length = 265 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 74/239 (30%), Positives = 132/239 (55%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 G+ + ++ + +I QM +GV +P+V+L F +GAV+A Q + L+Q+ Sbjct: 25 EFFVLAGKAFQNIFRRPHYGDDIILQMDTIGVGSLPIVVLTGFFSGAVMALQMSRALAQY 84 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 G + ++S+ RE+G +LTA+M+AGR+ S I +E+GSMK+ E+IDA+R +G D V+ Sbjct: 85 GQVGKTGTVVSVTLARELGPVLTALMVAGRNASGIASELGSMKVTEQIDAMRALGTDPVQ 144 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 L++PR+ A + LPLLTI+A+F + G I+ + ++P +++ ++ G Sbjct: 145 KLVTPRLIATGVMLPLLTIIADFVGMFGGFIIAKFFLNLPPRQYWTSVWRALEWNDVTQG 204 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 L+K A I +V G + +G+ T VV + +V ++D L + + G Sbjct: 205 LLKPLIFAIVISLVGCFYGLRTTGGTQGVGRSTTQAVVLATVLVFVLDLLITKIFVSQG 263 >gi|209694101|ref|YP_002262029.1| toluene tolerance protein Ttg2B [Aliivibrio salmonicida LFI1238] gi|208008052|emb|CAQ78191.1| toluene tolerance protein Ttg2B [Aliivibrio salmonicida LFI1238] Length = 264 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 81/266 (30%), Positives = 132/266 (49%), Gaps = 8/266 (3%) Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 S +IGK+ + +L G A + F L L++Q+Y VGV Sbjct: 5 SLILFVENIGKRALSTCEAIGRATFML------FGAIIAKPQPVRMFPL-LLQQLYSVGV 57 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 + ++++ G VI+ QG L +GAE L+S+ LRE+G ++TA++ AGR+G Sbjct: 58 LSLVIIVVSGLFIGMVISLQGYVILVDYGAETSLGQLVSLSLLRELGPVVTALLFAGRAG 117 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 SA+ AEIG MK E++ ++ M +D +R +I+PR+WA +IS+PLL ++ I G IV Sbjct: 118 SALTAEIGLMKTTEQLSSMEMMAIDPLRRIIAPRLWAGVISMPLLAMIFMAVGIWGGQIV 177 Query: 286 IWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 ++ I F+S ++ + +I LIK A + +A+ G+ S + Sbjct: 178 GVEWKGIDHGSFWSVMQASVDVRHDIVNSLIKCVVFAFVVTWIALFNGYDATPTSEGISL 237 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370 T VV S V+ ID + F Sbjct: 238 ATTRTVVHSSLAVLGIDFVLTALMFG 263 >gi|70728304|ref|YP_258053.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas fluorescens Pf-5] gi|68342603|gb|AAY90209.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas fluorescens Pf-5] Length = 265 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 68/256 (26%), Positives = 133/256 (51%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +++ F +LG G L++Q++ VGV + ++++ Sbjct: 8 ERVRLFGRSGIDVLAVLGRSTLFLFHALLGRGGIGGSFGLLVKQLHSVGVMSLVIIVVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG LS +G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+M Sbjct: 68 IFIGMVLALQGFNILSSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +I+PR+WA ISLPLL ++ + I G S V + + Sbjct: 128 KSTEQLSSLEMIGVDPLKYIIAPRLWAGFISLPLLAMIFSVVGIWGGSWVAVDWLGVYDG 187 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 +++ ++ T + ++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 188 SYWANMQNSVTFSGDVLNGVIKSIVFAFVVTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|126657935|ref|ZP_01729088.1| hypothetical protein CY0110_13761 [Cyanothece sp. CCY0110] gi|126620875|gb|EAZ91591.1| hypothetical protein CY0110_13761 [Cyanothece sp. CCY0110] Length = 263 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 68/248 (27%), Positives = 116/248 (46%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 L I G+ K K + + QM VG + + ++ + G V Sbjct: 9 RGLGIWFERLVAAILLGGQVFFHLLKTKIHRRNTLEQMSVVGPESLTIALITAGFVGMVF 68 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 Q A + FGA ++++ RE+ +LTAV++AGR GSA AEIG+M++ E+ID Sbjct: 69 TIQVAREFISFGAASTVGGVLALALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQID 128 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ + D + L+ PR+ A + LP+L IL+ + + G ++ YDI VF + Sbjct: 129 ALYMLKTDPIDYLVLPRVLACCLMLPVLNILSLLTGMTGGLLIANGLYDISPYVFLTSIR 188 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + L ++ T +IK+ I ++ G + +G+ TT VV S+ V +I+ Sbjct: 189 NFLELWDLVTSVIKSIAFGGLIAVIGCSWGLTTTGGAKGVGQSTTTAVVTSLLAVFVINF 248 Query: 363 LFAIFYFA 370 + F Sbjct: 249 FLSWVMFQ 256 >gi|254229285|ref|ZP_04922703.1| conserved hypothetical protein [Vibrio sp. Ex25] gi|262393183|ref|YP_003285037.1| ABC transporter permease component YrbE [Vibrio sp. Ex25] gi|151938209|gb|EDN57049.1| conserved hypothetical protein [Vibrio sp. Ex25] gi|262336777|gb|ACY50572.1| uncharacterized ABC transporter permease component YrbE [Vibrio sp. Ex25] Length = 263 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 75/268 (27%), Positives = 132/268 (49%), Gaps = 8/268 (2%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 ++F + +G++ + +L G K F L L++Q+Y V Sbjct: 2 VDNFMHFVASLGRRTLSICGAFGRATFML------IGALFTKPQPLKSFPL-LVKQLYSV 54 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 GV + ++++ G V++ QG L +GAE ++++ LRE+G ++TA++ AGR Sbjct: 55 GVQSLAIIVVSGLFIGMVLSLQGYVVLVDYGAEGSLGQMVALSLLRELGPVVTALLFAGR 114 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 +GSA+ AEIG MK E++ ++ M +D ++ +I+PR WA IS+PLL ++ I GA Sbjct: 115 AGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGAISMPLLAMIFMAVGIWGAQ 174 Query: 284 IVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 +V + + F+S S+ L +I +IK A + VA+ G+ S + Sbjct: 175 LVGVDWKGVDHGSFWSAMQSSVELGQDIGNSMIKCFAFAITVTWVALFNGYDAIPTSEGI 234 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + T VV S V+ +D + F Sbjct: 235 SRATTRTVVHSSLAVLGLDFVLTALMFG 262 >gi|89075259|ref|ZP_01161686.1| hypothetical protein SKA34_22619 [Photobacterium sp. SKA34] gi|89048940|gb|EAR54508.1| hypothetical protein SKA34_22619 [Photobacterium sp. SKA34] Length = 260 Score = 233 bits (594), Expect = 5e-59, Method: Composition-based stats. Identities = 74/255 (29%), Positives = 129/255 (50%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I + +G S + + LI+Q+Y VGV + ++I+ Sbjct: 5 AIAHLGRSGIEKCQTMGRATLMLFGALVSKPQPRKMFPLLIKQLYSVGVLSIAIIIVSGL 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V++ QG L+ FGAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 65 FIGMVLSLQGYLVLAGFGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +I+PR WA +IS+PLL ++ + + GA +V + I + Sbjct: 125 ATEQLSSMEMMAVDPLRRVIAPRFWAGVISMPLLALMFSVVGLWGAQVVGVDWKGIDYGS 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S S+ + +I +IKA A + +A+ G+ S + + T VV S Sbjct: 185 FWSVMQSSVNFSYDIGNSIIKAVAFAITVTWIAVFNGYDAVPTSEGISRATTRTVVNSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFILTALMFG 259 >gi|71736723|ref|YP_276266.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. phaseolicola 1448A] gi|257483485|ref|ZP_05637526.1| toluene tolerance proteinTtg2B, putative [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289627577|ref|ZP_06460531.1| putative ABC transport system permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647003|ref|ZP_06478346.1| putative ABC transport system permease protein [Pseudomonas syringae pv. aesculi str. 2250] gi|71557276|gb|AAZ36487.1| toluene tolerance proteinTtg2B, putative [Pseudomonas syringae pv. phaseolicola 1448A] gi|330869989|gb|EGH04698.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330987098|gb|EGH85201.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. lachrymans str. M301315] Length = 265 Score = 233 bits (594), Expect = 5e-59, Method: Composition-based stats. Identities = 69/267 (25%), Positives = 138/267 (51%), Gaps = 8/267 (2%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 S + +G+ + + L + G +S L+RQ+Y VG Sbjct: 4 KSLMDRVRLLGRSAIDIVTVLGRSGLFLVNALLGRGGAGSS-------FQLLVRQLYSVG 56 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V + ++++ G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+ Sbjct: 57 VMSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRA 116 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA IS+P+L ++ + I GAS Sbjct: 117 GSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFSVVGIWGASW 176 Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 V + + F+S ++ + ++ G+IK+ A + +A+ +G+ S + Sbjct: 177 VAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCEPTSEGIS 236 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370 + T VV + V+ +D + F Sbjct: 237 RATTRTVVYASLAVLGLDFILTALMFG 263 >gi|218710669|ref|YP_002418290.1| ABC transport protein: transmembrane protein (IM) [Vibrio splendidus LGP32] gi|218323688|emb|CAV20020.1| ABC transport protein: transmembrane protein (IM) [Vibrio splendidus LGP32] Length = 261 Score = 233 bits (594), Expect = 5e-59, Method: Composition-based stats. Identities = 77/258 (29%), Positives = 128/258 (49%), Gaps = 2/258 (0%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 I K I + + G K K F L L++Q Y VGV + ++++ Sbjct: 4 IAKTIAGVGKRALAICESFGRASLMLFGALFGIPKLKNFPL-LVKQFYSVGVQSLAIILV 62 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 G V++ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG Sbjct: 63 SGLFIGMVLSLQGYVVLIDYGAEGNLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIG 122 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 MK E+I ++ M +D ++ +I+PR+WA +IS+PLL ++ I GA +V + I Sbjct: 123 LMKATEQISSLEMMAVDPLKRIIAPRLWAGLISMPLLAMIFMAVGIWGAQLVGVDWKGID 182 Query: 294 FAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 F+S S+ L +I +IK A + +A+ G+ S + + T VV Sbjct: 183 HGSFWSAMQSSVELGRDIGNSMIKCMVFAITVTWIALFNGYDAVPTSEGISQATTRTVVH 242 Query: 353 SISIVIIIDSLFAIFYFA 370 S V+ +D + F Sbjct: 243 SSLAVLGLDFVLTALMFG 260 >gi|332172346|gb|AEE21600.1| protein of unknown function DUF140 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 259 Score = 233 bits (594), Expect = 5e-59, Method: Composition-based stats. Identities = 76/264 (28%), Positives = 133/264 (50%), Gaps = 8/264 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 IG+ + + +L G A K L+ I+Q+Y VGV + Sbjct: 2 QWLASIGRNTIDTVGAFGRAFLML------LGAVIAKPQLIKNTPLT-IKQIYVVGVQSL 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++++ G V+A QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ Sbjct: 55 LIIVVSGLFIGMVMALQGYTILVGYGAEGSLGPMVALSLLRELGPVVTALLFAGRAGSAL 114 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG MK E++ ++ M +D +R +++PR+WA IIS+P+L I+ + I+G +V Sbjct: 115 TAEIGLMKATEQLSSLEMMAVDPLRRIVAPRLWAGIISMPMLAIIFSAVGILGGHVVGVD 174 Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + ++S S+ ++ G+IK A I +A+ +G+ S + K T Sbjct: 175 WLGVDAGSYWSIMQSSVDWNEDVVNGIIKTFVFAFVITWIAIFKGYDAIPTSEGISKATT 234 Query: 348 TCVVQSISIVIIIDSLFAIFYFAI 371 VV S V+ +D + F I Sbjct: 235 ETVVFSSLAVLGLDFILTALMFGI 258 >gi|315633782|ref|ZP_07889072.1| toluene efflux ABC superfamily ATP binding cassette transporter, membrane protein [Aggregatibacter segnis ATCC 33393] gi|315477824|gb|EFU68566.1| toluene efflux ABC superfamily ATP binding cassette transporter, membrane protein [Aggregatibacter segnis ATCC 33393] Length = 261 Score = 232 bits (593), Expect = 5e-59, Method: Composition-based stats. Identities = 74/251 (29%), Positives = 128/251 (50%), Gaps = 1/251 (0%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 F + + LG + + I+Q++ +GV + +++L G Sbjct: 9 FGRHAINFGRALGRAGFLLFGALIGKPQVRKHFPLFIKQLHVLGVQSLLIIMLSGLFIGM 68 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+ QG L F AE L+++ LRE+G ++TA++ AGR+GSA+ AEIG MK E+ Sbjct: 69 VLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQ 128 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 + ++ M +D +R +I+PR WA II++P+L+I+ I G S+V + + F+S Sbjct: 129 LSSLEMMAVDPLRRVIAPRFWAGIIAMPILSIIFIAIGIWGGSLVGVDWKGVDAGSFWSV 188 Query: 301 FHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 S+ T + +I G IK+ F A A+ +A+ G+ S + K T VV + +V+ Sbjct: 189 MQSSVTWSHDILNGTIKSVFFAIAVVWIALFNGYDCIPTSEGISKATTRTVVHASLVVLG 248 Query: 360 IDSLFAIFYFA 370 +D + F Sbjct: 249 LDFVLTAIMFG 259 >gi|254509100|ref|ZP_05121202.1| ABC-type transport system involved in resistance to organic solvents, permease component [Vibrio parahaemolyticus 16] gi|219547981|gb|EED25004.1| ABC-type transport system involved in resistance to organic solvents, permease component [Vibrio parahaemolyticus 16] Length = 263 Score = 232 bits (593), Expect = 5e-59, Method: Composition-based stats. Identities = 75/262 (28%), Positives = 129/262 (49%), Gaps = 1/262 (0%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + H+ + + S G AS + L LI+Q+Y VGV + Sbjct: 1 MMAHLTDFVASTGRRALSVIASFGRASLMLFGALASRPQPIANLPLLIKQLYSVGVQSLL 60 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +++L G V++ QG L FGAE ++++ LRE+G ++TA++ AGR+GSA+ Sbjct: 61 IIVLSGLFIGMVLSLQGYVILIDFGAEGALGQMVALSLLRELGPVVTALLFAGRAGSALT 120 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ ++ M +D ++ +I+PR WA +IS+PLL ++ I G +V + Sbjct: 121 AEIGLMKATEQLSSMEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDW 180 Query: 290 YDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 I F++ S+ L +I +IK+ A + +A+ G+ S + + T Sbjct: 181 KGIDHGSFWAAMQSSVELGQDIGNSMIKSLAFAITVTWIALFNGYDAIPTSEGISRATTR 240 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV S V+ +D + F Sbjct: 241 TVVHSSLAVLGLDFVLTALMFG 262 >gi|77457091|ref|YP_346596.1| hypothetical protein Pfl01_0864 [Pseudomonas fluorescens Pf0-1] gi|77381094|gb|ABA72607.1| putative ABC transport system, membrane protein [Pseudomonas fluorescens Pf0-1] Length = 265 Score = 232 bits (593), Expect = 5e-59, Method: Composition-based stats. Identities = 66/256 (25%), Positives = 132/256 (51%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +++ +F + G G L++Q++ VGV + ++++ Sbjct: 8 ERVRRFGLAGIDSVAVFGRSTLFLFHALLGRGGIGGGFGLLVKQLHSVGVMSLVIIVVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG LS +G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+M Sbjct: 68 IFIGMVLALQGFNILSSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +I+PR+WA ISLP+L ++ + I G S V + + Sbjct: 128 KSTEQLSSLEMIGVDPLKYIIAPRLWAGFISLPVLAMIFSVVGIWGGSWVAVDWLGVYEG 187 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 ++S ++ + ++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 188 SYWSNMQNSVSFGDDVLNGIIKSAVFAFVVTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|320330045|gb|EFW86032.1| putative ABC transport system permease protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 265 Score = 232 bits (593), Expect = 5e-59, Method: Composition-based stats. Identities = 69/267 (25%), Positives = 138/267 (51%), Gaps = 8/267 (2%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 S + +G+ + + L + G +S L+RQ+Y VG Sbjct: 4 KSLMDRVRLLGRSAIDIVTVLGRSGLFLVNALLGRGGAGSS-------FQLLVRQLYSVG 56 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V + ++++ G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+ Sbjct: 57 VMSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRA 116 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA IS+P+L ++ + I GAS Sbjct: 117 GSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFSVVGIWGASW 176 Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 V + + F+S ++ + ++ G+IK+ A + +A+ +G+ S + Sbjct: 177 VAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCEPTSEGIS 236 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370 + T VV + V+ +D + F Sbjct: 237 RATTRTVVYASLAVLGLDFILTALMFG 263 >gi|114564530|ref|YP_752044.1| hypothetical protein Sfri_3369 [Shewanella frigidimarina NCIMB 400] gi|114335823|gb|ABI73205.1| protein of unknown function DUF140 [Shewanella frigidimarina NCIMB 400] Length = 261 Score = 232 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 69/239 (28%), Positives = 124/239 (51%), Gaps = 1/239 (0%) Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G + K LI+Q+Y +GV + ++++ G V+A QG L + Sbjct: 22 GRAGIMLWRAIVHVPRIKKGTPLLIKQVYVLGVRSMVIILVSGLFIGMVLALQGYNILVE 81 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 FG E ++++ LRE+G ++ A++ AGR+GSA+ AEIG MK E++ ++ M +D + Sbjct: 82 FGTEESLGPMVALSLLRELGPVVAALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAIDPL 141 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIF 311 R +I+PR WA +IS+PLL ++ + I+G +V ++ I F+S ++ +I Sbjct: 142 RQIIAPRFWAGVISMPLLALMFSLVGILGGHLVGVEWKGIDSGAFWSILRASVEWREDIV 201 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 LIK+ + +A+ G+ V + + + T+ VVQ+ V+ +D L F Sbjct: 202 NCLIKSVIFGVVVTWIALYRGYEVQPNPEGISRATTSTVVQASLAVLALDFLLTAIMFG 260 >gi|257465526|ref|ZP_05629897.1| permease [Actinobacillus minor 202] gi|257451186|gb|EEV25229.1| permease [Actinobacillus minor 202] Length = 260 Score = 232 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 77/264 (29%), Positives = 133/264 (50%), Gaps = 7/264 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N IGK + I A +L G +F+ LI+Q+Y VGV Sbjct: 1 MINFINQIGKTTIDIIRAFGRSAFMLW------GALIGKP-QFRKHSPLLIKQLYVVGVQ 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + +++L G V+ QG L F AE L+S+ LRE+G ++TA++ AGR+GS Sbjct: 54 SLLIIMLSGLFIGMVLGLQGYVVLVDFAAETSLGTLVSLSLLRELGPVVTALLFAGRAGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+P+L ++ I G S+V Sbjct: 114 ALTAEIGLMKATEQLSSLEMMAVDPLRRIIAPRFWAGVISMPILAVIFTAIGIWGGSLVG 173 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + + F+S ++ + +++ G IK+ A A+ +A+ G+ S + + Sbjct: 174 VDWKGVDSGSFWSVMQNSVSASDLINGFIKSIIFAFAVVWIALFNGYDSTATSEGISQAT 233 Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370 T VV + +++ +D + F Sbjct: 234 TKTVVNASLVILGLDFILTAIMFG 257 >gi|66047367|ref|YP_237208.1| hypothetical protein Psyr_4140 [Pseudomonas syringae pv. syringae B728a] gi|289676091|ref|ZP_06496981.1| putative ABC transport system permease protein [Pseudomonas syringae pv. syringae FF5] gi|63258074|gb|AAY39170.1| Protein of unknown function DUF140 [Pseudomonas syringae pv. syringae B728a] gi|330895265|gb|EGH27603.1| hypothetical protein PSYJA_00595 [Pseudomonas syringae pv. japonica str. M301072PT] gi|330937995|gb|EGH41776.1| hypothetical protein PSYPI_04838 [Pseudomonas syringae pv. pisi str. 1704B] gi|330969694|gb|EGH69760.1| hypothetical protein PSYAR_04288 [Pseudomonas syringae pv. aceris str. M302273PT] Length = 265 Score = 232 bits (592), Expect = 6e-59, Method: Composition-based stats. Identities = 70/267 (26%), Positives = 138/267 (51%), Gaps = 8/267 (2%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 S + +G+ + + L + G +S L+RQ+Y VG Sbjct: 4 KSLMDRVRLLGRSAIDIVTVLGRSGLFLVHALLGRGGAGSS-------FQLLVRQLYSVG 56 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V + ++++ G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+ Sbjct: 57 VMSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRA 116 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA ISLP+L ++ + I GAS Sbjct: 117 GSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFSVVGIWGASW 176 Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 V + + F+S ++ + ++ G+IK+ A + +A+ +G+ S + Sbjct: 177 VAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCEPTSEGIS 236 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370 + T VV + V+ +D + F Sbjct: 237 RATTRTVVYASLAVLGLDFILTALMFG 263 >gi|190150611|ref|YP_001969136.1| hypothetical protein APP7_1342 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|189915742|gb|ACE61994.1| hypothetical protein APP7_1342 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] Length = 276 Score = 232 bits (592), Expect = 7e-59, Method: Composition-based stats. Identities = 76/264 (28%), Positives = 131/264 (49%), Gaps = 7/264 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N IG ++ FI +L G +F+ LI+Q+Y +GV Sbjct: 19 VINFISGIGSTVIDFIRAFGRATFML------LGALIGKP-QFRKHTPLLIKQLYVLGVQ 71 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + +++L G V+ QG L F AE L+S+ LRE+G ++TA++ AGR+GS Sbjct: 72 SLLIIMLSGLFIGMVLGLQGYVVLVDFAAETSLGTLVSLSLLRELGPVVTALLFAGRAGS 131 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+P+L + I G S+V Sbjct: 132 ALTAEIGLMKATEQLSSLEMMAVDPLRRIIAPRFWAGVISMPILAAIFTAIGIWGGSLVG 191 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + + F+S ++ +++ G IK+ A A+ +A+ G+ S + + Sbjct: 192 VDWKGVDGGSFWSVMQNSVDWSDLINGFIKSIIFAFAVVWIALFNGYDSVATSEGISQAT 251 Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370 T VV + +V+ +D + F Sbjct: 252 TRTVVHASLVVLGLDFILTAIMFG 275 >gi|156975891|ref|YP_001446798.1| hypothetical protein VIBHAR_03657 [Vibrio harveyi ATCC BAA-1116] gi|156527485|gb|ABU72571.1| hypothetical protein VIBHAR_03657 [Vibrio harveyi ATCC BAA-1116] Length = 263 Score = 232 bits (592), Expect = 7e-59, Method: Composition-based stats. Identities = 74/268 (27%), Positives = 130/268 (48%), Gaps = 8/268 (2%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 +SF +G++ + +L G K L LI+Q+Y V Sbjct: 2 VDSFIQFVASLGRRTLAICEAFGRATLML------VGALVTRPQPIKN-LPLLIKQLYSV 54 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 GV + ++++ G V++ QG L +GAE ++++ LRE+G ++TA++ AGR Sbjct: 55 GVQSLAIIVVSGLFIGMVLSLQGYVVLVDYGAEGSLGQMVALSLLRELGPVVTALLFAGR 114 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 +GSA+ AEIG MK E++ ++ M +D ++ +I+PR WA IS+PLL ++ I GA Sbjct: 115 AGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGAISMPLLAMIFMAVGIWGAQ 174 Query: 284 IVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 +V + + F++ S+ L +I +IK A + +A+ G+ S + Sbjct: 175 LVGVDWKGVDHGSFWAAMQSSVELGQDIGNSMIKCIVFAITVTWIALFNGYDAIPTSEGI 234 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + T VV S V+ +D + F Sbjct: 235 SRATTRTVVHSSLAVLGLDFVLTALMFG 262 >gi|218248789|ref|YP_002374160.1| hypothetical protein PCC8801_4068 [Cyanothece sp. PCC 8801] gi|257061848|ref|YP_003139736.1| hypothetical protein Cyan8802_4107 [Cyanothece sp. PCC 8802] gi|218169267|gb|ACK68004.1| protein of unknown function DUF140 [Cyanothece sp. PCC 8801] gi|256592014|gb|ACV02901.1| protein of unknown function DUF140 [Cyanothece sp. PCC 8802] Length = 263 Score = 232 bits (592), Expect = 7e-59, Method: Composition-based stats. Identities = 72/255 (28%), Positives = 120/255 (47%), Gaps = 6/255 (2%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 ++ + + A +LG G+ K + + QM VG + + ++ + Sbjct: 8 RRGIGVWFERLMAAMLLG------GQVFFHLLKTPIHRRNTLEQMSVVGPESLTIALVTA 61 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V Q A + FGA +++I RE+ +LTAV++AGR GSA AEIG+M Sbjct: 62 GFVGMVFTIQVAREFIHFGAASTVGGVLAIALTRELSPVLTAVVVAGRVGSAFAAEIGTM 121 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 ++ E+IDA+ + D + L+ PR+ A + LP+L ILA + + G ++ YDI Sbjct: 122 RVTEQIDALYVLKTDPIDYLVVPRVLACCMMLPVLNILALMTGMAGGLLIADSLYDISPD 181 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 +F + L +I T LIK+ I ++ G + +G+ TT VV S+ Sbjct: 182 LFLKSARNFLELWDIVTSLIKSAVFGGLIAVIGCSWGLTTTGGAKGVGQSTTTAVVTSLL 241 Query: 356 IVIIIDSLFAIFYFA 370 V I + + F F Sbjct: 242 AVFIANFFLSWFMFQ 256 >gi|298488498|ref|ZP_07006528.1| permease component of an ABC superfamily transporter [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156839|gb|EFH97929.1| permease component of an ABC superfamily transporter [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 265 Score = 232 bits (592), Expect = 7e-59, Method: Composition-based stats. Identities = 69/267 (25%), Positives = 138/267 (51%), Gaps = 8/267 (2%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 S + +G+ + + L + G +S L+RQ+Y VG Sbjct: 4 KSLMDRVRLLGRSAIDIVTVLGRSGLFLVNALLGRGGAGSS-------FQLLVRQLYSVG 56 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V + ++++ G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+ Sbjct: 57 VMSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRA 116 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA IS+P+L ++ + I GAS Sbjct: 117 GSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFSVVGIWGASW 176 Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 V + + F+S ++ + ++ G+IK+ A + +A+ +G+ S + Sbjct: 177 VAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCDPTSEGIS 236 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370 + T VV + V+ +D + F Sbjct: 237 RATTRTVVYASLAVLGLDFILTALMFG 263 >gi|166363947|ref|YP_001656220.1| hypothetical protein MAE_12060 [Microcystis aeruginosa NIES-843] gi|166086320|dbj|BAG01028.1| hypothetical protein MAE_12060 [Microcystis aeruginosa NIES-843] Length = 264 Score = 232 bits (592), Expect = 8e-59, Method: Composition-based stats. Identities = 64/239 (26%), Positives = 115/239 (48%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG G+ K + + QM VG + + ++ + G V Q A + Sbjct: 18 LGAAGLLAGQTFLHILNGKIHRRNTLEQMSIVGPESLTIALITAAFVGMVFTIQVAREFI 77 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 FGA F ++S+ RE+ +LTAV++AGR GSA AEIG+M++ E+IDA+ + D Sbjct: 78 FFGAGSFVGGVLSLALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQIDALYILKTDP 137 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 + L+ PR+ A + LPLLTI++ + ++G + Y I +++F + ++ Sbjct: 138 IDYLVIPRVIACSLMLPLLTIISLVTGLLGGLFISDSLYGISYSLFLQSAQNFLETWDLI 197 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + ++K+ I I+ G + +G+ TT VV S+ + + + + F Sbjct: 198 SSMLKSLIFGVLIAIIGCSWGLTTTGGAKGVGQSTTTAVVTSLLAIFVANFFLSWLMFQ 256 >gi|86147572|ref|ZP_01065882.1| putative ABC superfamily transport protein [Vibrio sp. MED222] gi|85834611|gb|EAQ52759.1| putative ABC superfamily transport protein [Vibrio sp. MED222] Length = 259 Score = 232 bits (592), Expect = 8e-59, Method: Composition-based stats. Identities = 77/258 (29%), Positives = 128/258 (49%), Gaps = 2/258 (0%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 I K I + + G K K F L L++Q Y VGV + ++++ Sbjct: 2 IAKTIAGVGKRALAICESFGRASLMLFGALFGIPKLKNFPL-LVKQFYSVGVQSLAIILV 60 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 G V++ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG Sbjct: 61 SGLFIGMVLSLQGYVVLIDYGAEGNLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIG 120 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 MK E+I ++ M +D ++ +I+PR+WA +IS+PLL ++ I GA +V + I Sbjct: 121 LMKATEQISSLEMMAVDPLKRIIAPRLWAGLISMPLLAMIFMAVGIWGAQLVGVDWKGID 180 Query: 294 FAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 F+S S+ L +I +IK A + +A+ G+ S + + T VV Sbjct: 181 HGSFWSAMQSSVELGRDIGNSMIKCMVFAITVTWIALFNGYDAVPTSEGISQATTRTVVH 240 Query: 353 SISIVIIIDSLFAIFYFA 370 S V+ +D + F Sbjct: 241 SSLAVLGLDFVLTALMFG 258 >gi|330950264|gb|EGH50524.1| hypothetical protein PSYCIT7_02422 [Pseudomonas syringae Cit 7] Length = 265 Score = 232 bits (592), Expect = 8e-59, Method: Composition-based stats. Identities = 70/267 (26%), Positives = 138/267 (51%), Gaps = 8/267 (2%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 S + +G+ + + L + G +S L+RQ+Y VG Sbjct: 4 KSLMDRVSLLGRSAIDIVTVLGRSGLFLVHALLGRGGAGSS-------FQLLVRQLYSVG 56 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V + ++++ G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+ Sbjct: 57 VMSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRA 116 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA ISLP+L ++ + I GAS Sbjct: 117 GSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFSVVGIWGASW 176 Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 V + + F+S ++ + ++ G+IK+ A + +A+ +G+ S + Sbjct: 177 VAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCEPTSEGIS 236 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370 + T VV + V+ +D + F Sbjct: 237 RATTRTVVYASLAVLGLDFILTALMFG 263 >gi|85860995|ref|YP_463197.1| ABC transporter permease [Syntrophus aciditrophicus SB] gi|85724086|gb|ABC79029.1| ABC transporter permease protein [Syntrophus aciditrophicus SB] Length = 381 Score = 232 bits (592), Expect = 8e-59, Method: Composition-based stats. Identities = 82/367 (22%), Positives = 165/367 (44%), Gaps = 6/367 (1%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 V R +G+W + A+++ A+++ I + I D+ + D+ ++ F+ K Sbjct: 21 LVLRLSGDWMANGRLPDAEEIRQALSQQIPAPRIIFDVVGLGAWDSG----LLIFLAKVF 76 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 + G+S L + ++ S + + + F Sbjct: 77 DICRGNGISVDSSGLPPGVCRLLELASPEKQRSGVTREKSPPSFLVRVADATLDFGRGFK 136 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 +G + F+ L LI Q G +P+V LIS + G ++A Sbjct: 137 DMLAFVGDATLSVLRMLRGKPGFRRSDLILILQ--ETGAQALPIVSLISLLVGMILAFVA 194 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A QL FG +I+ D++ I +R +G ++T +++AGR+G+A A++G M++NEEIDA+ Sbjct: 195 AIQLRMFGVQIYVADVVGIAMVRVMGAIMTGIIMAGRTGAAFAAQLGMMQVNEEIDALEV 254 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +G+ V L+ PR+ AL++ +PLL I ++ ++G IV D+ ++ + + Sbjct: 255 LGVSPVDFLVLPRLLALMLMMPLLCIYSDLMGVVGGLIVGVGMLDLGVIEYYHETVNAVS 314 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L + GL + + + G +++++G T+ VV I +++ ++ + Sbjct: 315 LTYFWIGLFHSFVFGVLVALAGCLRGLQCERNASAVGFAATSAVVTGIVSIVVATAIITL 374 Query: 367 FYFAIGI 373 +GI Sbjct: 375 LCQVLGI 381 >gi|163749276|ref|ZP_02156525.1| hypothetical protein KT99_08438 [Shewanella benthica KT99] gi|161330995|gb|EDQ01921.1| hypothetical protein KT99_08438 [Shewanella benthica KT99] Length = 260 Score = 232 bits (591), Expect = 8e-59, Method: Composition-based stats. Identities = 77/256 (30%), Positives = 128/256 (50%), Gaps = 2/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + LG A + KG L ++Q+Y VGV + ++++ Sbjct: 5 ESLANLGRGGIALVTGLGKAGIMLWGAIAHKPRLKG-LPLFVKQLYVVGVQSMVLILISG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L FG E ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +I+PR WA ++SLPLLT++ I G IV ++ I Sbjct: 124 KSTEQLSSLEMMAIDPLRQIIAPRFWAGVVSLPLLTLMFTAIGIYGGYIVGVEWKGIDGG 183 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ +I LIK+ + +A+ G+ V + + K T VVQS Sbjct: 184 SFWSILQASVEWREDIVNCLIKSFLFGIVVTWIALYRGYQVVPNPEGISKATTQTVVQSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D L F Sbjct: 244 LAVLALDFLLTAIMFG 259 >gi|255549070|ref|XP_002515591.1| Inner membrane protein yrbE, putative [Ricinus communis] gi|223545535|gb|EEF47040.1| Inner membrane protein yrbE, putative [Ricinus communis] Length = 350 Score = 232 bits (591), Expect = 9e-59, Method: Composition-based stats. Identities = 57/236 (24%), Positives = 115/236 (48%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 V+ G+ K K + ++Q+ VG V V +L S G Q + ++ G Sbjct: 105 VLVVAGQVIIRILKGKVHWRNTLQQLERVGPKSVGVCLLTSAFVGMAFTIQFVREFTKLG 164 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 + ++++ RE+ ++T++++AGR GSA AE+G+M+++E+ D +R +G + V Sbjct: 165 LQRSVGGVLALAFSRELSPVVTSIVVAGRIGSAYAAELGTMQVSEQTDTLRVLGTNPVDY 224 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L++PR+ A ++LPLLT++ + ++I+ + + + +I + + Sbjct: 225 LVTPRVIASCVALPLLTLMCFTVGLASSAILADGVFGVSINIILDSAQRVLKSWDIISAM 284 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 IK+ I IV+ G + +G+ T+ VV S+ + I D + +F Sbjct: 285 IKSQVFGAIISIVSCAWGVTTSGGAKGVGESTTSAVVISLVGIFIADFALSYCFFQ 340 >gi|157373873|ref|YP_001472473.1| hypothetical protein Ssed_0734 [Shewanella sediminis HAW-EB3] gi|157316247|gb|ABV35345.1| protein of unknown function DUF140 [Shewanella sediminis HAW-EB3] Length = 260 Score = 232 bits (591), Expect = 9e-59, Method: Composition-based stats. Identities = 79/265 (29%), Positives = 133/265 (50%), Gaps = 9/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N +G+ + F+ +L I A + KGF L ++Q+Y VGV Sbjct: 3 MTNQLASLGRLTIDFVVGLGRAGVMLWGAI-------ARKPRIKGFPL-FVKQLYVVGVQ 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++ + G V+A QG L FG E ++++ LRE+G ++TA++ AGR+GS Sbjct: 55 SMVLIFVSGLFIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGS 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ ++ M +D +R +I+PR WA ++SLPLL ++ I G +V Sbjct: 115 ALTAEIGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVVSLPLLALIFTAVGIYGGHVVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 ++ I F+S ++ +I +IK+ A + +A+ G+ V + + K Sbjct: 175 VEWKGIDSGSFWSILQASVEWREDIVNCIIKSLVFAVVVTWIALYRGYRVIPNPEGISKA 234 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VVQS V+ +D L F Sbjct: 235 TTQTVVQSSLAVLALDFLLTAVMFG 259 >gi|323699476|ref|ZP_08111388.1| protein of unknown function DUF140 [Desulfovibrio sp. ND132] gi|323459408|gb|EGB15273.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans ND132] Length = 267 Score = 232 bits (591), Expect = 9e-59, Method: Composition-based stats. Identities = 71/243 (29%), Positives = 125/243 (51%), Gaps = 5/243 (2%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G + + + G ++RQ+Y++GV V V+ LI TG V+ Q + LS Sbjct: 25 IGSLTLFLLDSMRLVFAGLGQFPKIVRQIYFIGVQSVSVIALIGLFTGMVMGMQLYYALS 84 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 FGA+ F +++ +RE+ +LTA+M+ GR+GSA+ AEIG M+I+E+IDA+ M ++ Sbjct: 85 VFGADGFLGTGVALSMVRELAPVLTAIMLTGRAGSAMTAEIGVMRISEQIDALTIMDINP 144 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 +R L++P++ A +IS P+LT N A+ G + K V++SR + +I Sbjct: 145 MRYLVAPKMAACLISFPILTAFFNLIALWGGWLTGVKLLGANAGVYWSRVSGSLDWDDIE 204 Query: 312 TGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 G IK+ + + EG+ + + T+ VV+S I++ D + Sbjct: 205 GGFIKSIVFGLLVCTICCFEGYNTHLRSGHAGPEGVSQSTTSAVVKSCVIILAADYILTS 264 Query: 367 FYF 369 + Sbjct: 265 LLW 267 >gi|262273844|ref|ZP_06051657.1| uncharacterized ABC transporter permease component YrbE [Grimontia hollisae CIP 101886] gi|262222259|gb|EEY73571.1| uncharacterized ABC transporter permease component YrbE [Grimontia hollisae CIP 101886] Length = 260 Score = 232 bits (591), Expect = 9e-59, Method: Composition-based stats. Identities = 68/254 (26%), Positives = 126/254 (49%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + + + +G + K L+ Q+Y VGV + ++++ Sbjct: 6 VQSLGARAMAVSQTMGRATFVLLGALVGKPQPKKMFPLLLTQIYSVGVRSLAIIMVSGLF 65 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V++ QG L+ FGAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 IGMVLSLQGYLVLADFGAESSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +++PR WA +IS+PLL ++ I G +V + I + + Sbjct: 126 TEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLAMIFMMVGIWGGQLVGVDWKGIDYGSY 185 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 ++ S+ L +I IK+ A + +A+ G+ S + + T VV S Sbjct: 186 WAVMQSSVELGYDIGQSFIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLA 245 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 246 VLGLDFVLTALMFG 259 >gi|83311193|ref|YP_421457.1| ABC-type transport system involved in resistance to organic solvents [Magnetospirillum magneticum AMB-1] gi|82946034|dbj|BAE50898.1| ABC-type transport system involved in resistance to organic solvents [Magnetospirillum magneticum AMB-1] Length = 258 Score = 232 bits (591), Expect = 9e-59, Method: Composition-based stats. Identities = 64/264 (24%), Positives = 123/264 (46%), Gaps = 7/264 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N+ +G+ + F+ + + +S+T + + L I +G Sbjct: 1 MSNVLAPVGRVFLAFLAHVGRLSAFTAMAVSHT---VRPPFYPRLILREFIE----IGYF 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PVV L + TG V+A Q S+F AE ++ + RE+ +L +M+AGR G+ Sbjct: 54 SLPVVGLTAVFTGMVLALQSYSGFSRFAAEGAVATVVVLSVTRELAPVLAGLMVAGRIGA 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 ++ AEIG+M++ E+IDA+ T+ + + L++PRI A + LP L ++A+ + G IV Sbjct: 114 SMAAEIGTMRVTEQIDALTTLSTNPFKYLVAPRILAGTLMLPFLVLIADIIGVFGGYIVG 173 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 A + +R ++ +GL KA I ++ G+ + +G Sbjct: 174 VYKLGFNSATYIARTWEFLEPLDVISGLTKAAVFGFLITLMGCYNGYYSKGGAQGVGAAT 233 Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370 T VV + ++++ + + +F Sbjct: 234 TNAVVSAAIMILVFNYVITAMFFG 257 >gi|212703465|ref|ZP_03311593.1| hypothetical protein DESPIG_01509 [Desulfovibrio piger ATCC 29098] gi|212673125|gb|EEB33608.1| hypothetical protein DESPIG_01509 [Desulfovibrio piger ATCC 29098] Length = 264 Score = 232 bits (591), Expect = 9e-59, Method: Composition-based stats. Identities = 70/255 (27%), Positives = 126/255 (49%), Gaps = 5/255 (1%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + LG V + + + I+Q+Y +G + V++LI G Sbjct: 10 RLGAAVLRMLDSLGAVTLFMLDGLRHIFTSPRIVPRTIQQLYVIGYKSLFVILLIGIFCG 69 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+ QG + L QFG+ +S+ +RE+G +LTA+M+AGR+GS++ AEIG M+I++ Sbjct: 70 MVLGLQGYYTLVQFGSVGMLGSAVSLSLIRELGPVLTAIMLAGRAGSSMAAEIGVMRISD 129 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +IDA+ M ++ + L+SPR+ A +++ PLLT + + IIG + I + Sbjct: 130 QIDALDVMDINSMAYLVSPRLVASLLAFPLLTAIFDVIGIIGGYLTGVLMLHINEGAYLY 189 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCVVQSI 354 R S+ T+ ++ G IK+ + V +G+ V ++G T+ VV S Sbjct: 190 RIASSVTMNDVAGGFIKSLVFGLLVATVCCHQGYTTHMRRDSVGPEAVGNATTSAVVISC 249 Query: 355 SIVIIIDSLFAIFYF 369 ++++ D + F Sbjct: 250 VLILVADYVLTSFLL 264 >gi|152978463|ref|YP_001344092.1| hypothetical protein Asuc_0787 [Actinobacillus succinogenes 130Z] gi|150840186|gb|ABR74157.1| protein of unknown function DUF140 [Actinobacillus succinogenes 130Z] Length = 259 Score = 232 bits (591), Expect = 9e-59, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 127/255 (49%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K I F LG + +F+ LI+Q++ +GV + ++++ Sbjct: 4 KLISGFGATVIKSVQALGRSGFMLFGALVGTPQFRKHTPLLIKQLHVLGVQSLLIILMSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 F G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 FFIGMVLGLQGYVVLVDFAAEANVGQLVALALLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +I+PR WA +I++P+L +L +IG S++ + I Sbjct: 124 KATEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPILAVLFTAVGVIGGSLIGVDWKGIDGG 183 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S + ++ G IK+ A + VA+ G+ S + + T VV S Sbjct: 184 SFWSVMQNAVASKDLLYGFIKSVVFAFTVVWVALFNGYDCVPTSEGISQATTKTVVHSSL 243 Query: 356 IVIIIDSLFAIFYFA 370 +V+ +D + F Sbjct: 244 LVLGLDFVLTAIMFG 258 >gi|330815311|ref|YP_004359016.1| ABC transporter, inner membrane subunit [Burkholderia gladioli BSR3] gi|327367704|gb|AEA59060.1| ABC transporter, inner membrane subunit [Burkholderia gladioli BSR3] Length = 255 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ +V + + + + ++ + +Q++++G Sbjct: 1 MISAIGRYVVGGLERTGYASRLFVRLVLECFALLRRP-------RLVTKQIHFLGNYSFV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++GAE L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGAEQSLGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D ++ +++PR+WA II++PLL+ + ++G V Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKTVVAPRMWAGIITMPLLSAIFCAVGVLGGYFVGVVL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + ++ G++K+ A+ A+ +G+ + + T Sbjct: 174 IGVDPGAFWSQMQGGVDVWSDVGNGVLKSVVFGFAVTFTALYQGYEAKPTPEGVSRATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVYASLAVLGLDFLLTALMFS 255 >gi|223940418|ref|ZP_03632271.1| protein of unknown function DUF140 [bacterium Ellin514] gi|223890913|gb|EEF57421.1| protein of unknown function DUF140 [bacterium Ellin514] Length = 259 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 72/244 (29%), Positives = 123/244 (50%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 LG + T E +S + KG + I Q+Y++GV VV++ TG V+ Sbjct: 7 RFVAEWLQGLGRISLLTKEALSSLFSLKGSWGNFIYQLYFIGVKSQSVVLITGAFTGMVL 66 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 Q +Q Q + ++ ++S+ E+G +LTA+M+AGR G+A+ AEIG+MK+ E++D Sbjct: 67 CAQTYYQFHQVKLDTATLAVVSVSMCSELGPVLTALMVAGRVGAAMAAEIGTMKVTEQVD 126 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+RT+ V L+ PR+ A ++SLPLLT A II +V I ++ Sbjct: 127 ALRTLATHPVDYLVVPRLTASVVSLPLLTAEAIAVGIISGYMVGVYLLGIDPVYSYTNML 186 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 +++ TG+IK+ I I+ +G G + +G+ T VV + ++I + Sbjct: 187 KYTNSSDVMTGIIKSVIFGVIIAIIGCYKGMTCGEGAEGVGRATTEAVVYASITILISNF 246 Query: 363 LFAI 366 + Sbjct: 247 FLTL 250 >gi|163788065|ref|ZP_02182511.1| ABC transporter, permease [Flavobacteriales bacterium ALC-1] gi|159876385|gb|EDP70443.1| ABC transporter, permease [Flavobacteriales bacterium ALC-1] Length = 260 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 78/237 (32%), Positives = 126/237 (53%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 S +G + TG F +K L+ Q Y +G + +V + F+ G V+ Q Sbjct: 13 SFLIEIGDMSYFTGRFFKELFKRPFEFKELLNQCYSMGNKSLLLVGITGFIIGLVLTLQT 72 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 L +FGA + ++SI +REIG +LTA++ AGR GS I AEIGSMK+ E+IDA+ Sbjct: 73 RPTLMEFGAVSWMPSMVSISIVREIGPILTALVCAGRIGSGIGAEIGSMKVTEQIDAMEV 132 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 G + + L+ R+ A+ + LPLL I+ + A++G+ +V D+ F ++F++ Sbjct: 133 SGTNPFKYLVVTRVLAVTLMLPLLVIIGDAVALLGSYLVESVKGDVSFVLYFNQVFDALK 192 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +I IK+ F AIGIV +G+ + +GK T VV + ++ IID + Sbjct: 193 FGDIMPATIKSFFFGLAIGIVGCYKGYYCKKGTAGVGKAANTAVVFTSLLLFIIDFI 249 >gi|302185305|ref|ZP_07261978.1| putative ABC transport system permease protein [Pseudomonas syringae pv. syringae 642] Length = 265 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 70/267 (26%), Positives = 138/267 (51%), Gaps = 8/267 (2%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 S + +G+ + + L + G +S L+RQ+Y VG Sbjct: 4 KSLMDRVRLLGRSAIDIVTVLGRSGLFLVHALLGRGGAGSS-------FQLLVRQLYSVG 56 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V + ++++ G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+ Sbjct: 57 VMSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRA 116 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA ISLP+L ++ + I GAS Sbjct: 117 GSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFSVVGIWGASW 176 Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 V + + F+S ++ + ++ G+IK+ A + +A+ +G+ S + Sbjct: 177 VAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCDPTSEGIS 236 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370 + T VV + V+ +D + F Sbjct: 237 RATTRTVVYASLAVLGLDFILTALMFG 263 >gi|54310335|ref|YP_131355.1| hypothetical protein PBPRA3247 [Photobacterium profundum SS9] gi|46914776|emb|CAG21553.1| conserved hypothetical protein [Photobacterium profundum SS9] Length = 260 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 73/254 (28%), Positives = 127/254 (50%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + +G S + K L++Q+Y VGV + ++++ Sbjct: 6 IASVGRQGIEKFQTIGRATLLLYGALVSKPQPKKMFPLLMKQLYSVGVLSIAIIMVSGLF 65 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V++ QG L FGAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 IGMVLSLQGYIVLVDFGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +I+PR WA +IS+PLL+++ + I G +V + I + F Sbjct: 126 TEQLSSMEMMAVDPLRQVIAPRFWAGVISMPLLSMMFSAVGIWGGQLVGVDWKGIDYGSF 185 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S ++ L +I LIK+ A I +A+ G+ S + T VV + Sbjct: 186 WSVMQASVELGEDIGNSLIKSVVFAITITWIAVFNGYDAVPTSEGISLATTRTVVNASLA 245 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 246 VLGLDFVLTALMFG 259 >gi|91201081|emb|CAJ74139.1| strongly similar to ABC-transporter, permease [Candidatus Kuenenia stuttgartiensis] Length = 260 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 7/255 (2%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 IG + KFI + + Y F+ +I+Q+ ++GV V V++L Sbjct: 11 IGNSLHKFIRELGKMGCFFANALFYM---LFPPYLFR----RIIKQINFIGVKTVLVIVL 63 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 TG V+A Q + L +FGAE +++ ++E+G ++ A+M+ GR+GSAI AEIG Sbjct: 64 TGTFTGMVLALQMYYVLIKFGAEARLGPAVAMSLIKELGPVICALMVTGRAGSAITAEIG 123 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 M+I+E++DA+ M L+ + LI P I A +ISLPLL + + G V + Sbjct: 124 IMRISEQVDALDAMALNPYKYLIIPNIIAGVISLPLLNAIFVVLGVFGGYAVGVGLMGVS 183 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 +F + ++F G K+ I ++ +GF G + + K T VV S Sbjct: 184 SGTYFGGINDFVAARDVFEGFYKSLSFGVLITWISCYKGFYTGYGAEGVSKATTQSVVIS 243 Query: 354 ISIVIIIDSLFAIFY 368 +++I D Sbjct: 244 SVVILIWDYFMTSLL 258 >gi|320107063|ref|YP_004182653.1| hypothetical protein AciPR4_1853 [Terriglobus saanensis SP1PR4] gi|319925584|gb|ADV82659.1| protein of unknown function DUF140 [Terriglobus saanensis SP1PR4] Length = 259 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 77/254 (30%), Positives = 127/254 (50%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 +V ++ + L +G S + + QM +G +P+VIL F Sbjct: 3 LVSPVDFTKRSIAALQEYSLLSGRAMKSLLTPPIYWDEIFTQMDSIGFGSLPIVILAGFF 62 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG V+A Q A L QFGA + L+++ ++E+G +LT +M++GR+ S I +E+GSM++ Sbjct: 63 TGCVLALQSATALQQFGAVSKTGSLVALSMVKELGPVLTGLMVSGRNASGIASELGSMRV 122 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+R +G D VR L+ PRI A +I L L+IL+ I G ++V + + + Sbjct: 123 TEQIDAMRALGTDPVRKLVLPRIAATVIMLAFLSILSAAMGIAGGALVSVALLGLNSSAY 182 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 F +++ ++ GL+K F I V G + +GK T VV S + Sbjct: 183 FHSSYASLVYGDVVQGLVKPVFFGFIIASVGCYFGMTTKGGTQGVGKSTTQAVVISSVCI 242 Query: 358 IIIDSLFAIFYFAI 371 I++D L I Sbjct: 243 IVVDFLLTRLMIGI 256 >gi|165976711|ref|YP_001652304.1| permease [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|303250627|ref|ZP_07336824.1| permease [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303252079|ref|ZP_07338248.1| permease [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307246209|ref|ZP_07528290.1| hypothetical protein appser1_14130 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307250543|ref|ZP_07532487.1| hypothetical protein appser4_13230 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307252926|ref|ZP_07534814.1| hypothetical protein appser6_14370 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307255189|ref|ZP_07537007.1| hypothetical protein appser9_14250 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|165876812|gb|ABY69860.1| probable permease [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|302649061|gb|EFL79248.1| permease [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302650615|gb|EFL80774.1| permease [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306852818|gb|EFM85042.1| hypothetical protein appser1_14130 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306857436|gb|EFM89548.1| hypothetical protein appser4_13230 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306859564|gb|EFM91589.1| hypothetical protein appser6_14370 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306862062|gb|EFM94038.1| hypothetical protein appser9_14250 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] Length = 258 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 76/264 (28%), Positives = 131/264 (49%), Gaps = 7/264 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N IG ++ FI +L G +F+ LI+Q+Y +GV Sbjct: 1 MINFISGIGSTVIDFIRAFGRATFML------LGALIGKP-QFRKHTPLLIKQLYVLGVQ 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + +++L G V+ QG L F AE L+S+ LRE+G ++TA++ AGR+GS Sbjct: 54 SLLIIMLSGLFIGMVLGLQGYVVLVDFAAETSLGTLVSLSLLRELGPVVTALLFAGRAGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+P+L + I G S+V Sbjct: 114 ALTAEIGLMKATEQLSSLEMMAVDPLRRIIAPRFWAGVISMPILAAIFTAIGIWGGSLVG 173 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + + F+S ++ +++ G IK+ A A+ +A+ G+ S + + Sbjct: 174 VDWKGVDGGSFWSVMQNSVDWSDLINGFIKSIIFAFAVVWIALFNGYDSVATSEGISQAT 233 Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370 T VV + +V+ +D + F Sbjct: 234 TRTVVHASLVVLGLDFILTAIMFG 257 >gi|221134714|ref|ZP_03561017.1| hypothetical protein GHTCC_07282 [Glaciecola sp. HTCC2999] Length = 258 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 69/255 (27%), Positives = 132/255 (51%), Gaps = 2/255 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 +V+ ++ G + + K + ++Q+Y VGV + ++++ Sbjct: 4 VVQVGANTLDTIRSFGRAFLMLTGALIAVPQLKN-IRLTLQQIYVVGVQSLLIILVSGLF 62 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+A QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 63 IGMVMALQGYTILVGYGAEGSLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 122 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +++PR+WA IIS+P+L I+ + I+G +V + + + Sbjct: 123 TEQLSSLEMMAVDPLRRVVAPRVWAGIISMPMLAIIFSAIGILGGHLVGVDWLGVDSGSY 182 Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S +T ++ G+IK+ A + +A+ +G+ S + + T VV S Sbjct: 183 WSIMQATVDWNKDVVNGIIKSIVFAIVVTWIAIFKGYDAVPTSEGISQATTQTVVYSSLA 242 Query: 357 VIIIDSLFAIFYFAI 371 V+ +D + F I Sbjct: 243 VLGLDFVLTALMFGI 257 >gi|183597953|ref|ZP_02959446.1| hypothetical protein PROSTU_01302 [Providencia stuartii ATCC 25827] gi|188022725|gb|EDU60765.1| hypothetical protein PROSTU_01302 [Providencia stuartii ATCC 25827] Length = 260 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 71/256 (27%), Positives = 121/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + I G +F LI+Q+Y VGV + +V + Sbjct: 4 EAIAALGRRWIEIFSAFGRAGYMLFRSLIGKPEFSKQWPLLIKQLYAVGVQSLLIVAVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ F AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLVLTTFSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +I+PR WA IS+PLL+++ I+G ++V + I Sbjct: 124 KATEQISSLEMMAVDPLRRVIAPRFWAGFISMPLLSLIFVAVGILGGALVGVDWKGIDEG 183 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ S+ +I IK+ A + +A+ G+ S + + T VV + Sbjct: 184 FFWASMQSSVDWRMDIVNCFIKSLVFAITVTWIALFNGYDAIPTSEGISQATTRTVVHAS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|28899437|ref|NP_799042.1| ABC transporter [Vibrio parahaemolyticus RIMD 2210633] gi|153839285|ref|ZP_01991952.1| toluene tolerance protein Ttg2B [Vibrio parahaemolyticus AQ3810] gi|260363394|ref|ZP_05776246.1| organic solvent ABC transporter, permease protein [Vibrio parahaemolyticus K5030] gi|260879329|ref|ZP_05891684.1| organic solvent ABC transporter, permease protein [Vibrio parahaemolyticus AN-5034] gi|260895712|ref|ZP_05904208.1| organic solvent ABC transporter, permease protein [Vibrio parahaemolyticus Peru-466] gi|260900285|ref|ZP_05908680.1| organic solvent ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037] gi|28807673|dbj|BAC60926.1| putative ABC superfamily transport protein [Vibrio parahaemolyticus RIMD 2210633] gi|149747186|gb|EDM58174.1| toluene tolerance protein Ttg2B [Vibrio parahaemolyticus AQ3810] gi|308087410|gb|EFO37105.1| organic solvent ABC transporter, permease protein [Vibrio parahaemolyticus Peru-466] gi|308093131|gb|EFO42826.1| organic solvent ABC transporter, permease protein [Vibrio parahaemolyticus AN-5034] gi|308107579|gb|EFO45119.1| organic solvent ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037] gi|308111178|gb|EFO48718.1| organic solvent ABC transporter, permease protein [Vibrio parahaemolyticus K5030] gi|328471426|gb|EGF42321.1| ABC transporter [Vibrio parahaemolyticus 10329] Length = 263 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + + G S + LI+Q+Y VGV + ++++ Sbjct: 7 QFVASLGRRTLAICEAFGRATLMLVGAIFSKPQPSKSFPLLIKQLYSVGVQSLAIIVVSG 66 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V++ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 67 LFIGMVLSLQGYVVLVDYGAEGSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 126 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D ++ +I+PR WA IS+PLL ++ I GA +V + + Sbjct: 127 KATEQLSSLEMMAVDPLKRVIAPRFWAGAISMPLLAMIFMAVGIWGAQLVGVDWKGVDHG 186 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ S+ L +I +IK A + +A+ G+ S + + T VV S Sbjct: 187 SFWAAMQSSVELGQDIGNSMIKCFVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 246 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 247 LAVLGLDFVLTALMFG 262 >gi|296532300|ref|ZP_06895039.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] gi|296267376|gb|EFH13262.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] Length = 261 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 64/266 (24%), Positives = 129/266 (48%), Gaps = 7/266 (2%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 N N IG+ ++ + + A + + + FL + + +G Sbjct: 2 NLILNALAAIGRGVLGACRAAGAIALF---AVEGVSHLVRPPFYPRLFLRAFVE----IG 54 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 +PVV L + TG V+A Q S+FGAE +++ + RE+G +L +M+AGR Sbjct: 55 YFSLPVVSLTAIFTGMVLALQSYSGFSRFGAESAIANVVVLSITRELGPVLAGLMVAGRI 114 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 G+A AEIG+M++ ++IDA+ T+ + ++ L++PR+ A +++PLL ++A+ ++G + Sbjct: 115 GAAFAAEIGTMRVTDQIDALTTLSTNPMKYLVAPRLLAGTLAMPLLVVVADILGVMGGWL 174 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 + A + + + ++ +GL+KA I ++ G+ + +G Sbjct: 175 IGTAQLGFTSASYLTSTLNFVQPMDVISGLVKAAVFGFTITLMGCYSGYNSRGGAQGVGA 234 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370 T VV S +++ +D + +F Sbjct: 235 ATTRAVVASSILILALDYILTAMFFG 260 >gi|320538922|ref|ZP_08038598.1| putative phospholipid transporter subunit: membrane component of ABC superfamily [Serratia symbiotica str. Tucson] gi|320031082|gb|EFW13085.1| putative phospholipid transporter subunit: membrane component of ABC superfamily [Serratia symbiotica str. Tucson] Length = 260 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 68/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + G + + L++QMY +GV + ++++ Sbjct: 4 QALASLGRRCIDTSASFGRAGLMLFNALVGQPEPRKQWPLLLKQMYSIGVQSLLIIMVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYIVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +++PR WA +ISLPLLTI+ ++G +IV + I Sbjct: 124 KATEQISSLEMMAVDPLRRIVAPRFWAGLISLPLLTIIFVALGMLGGAIVGVDWKGIDSG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ L+K+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQGAVEWKKDLLNCLLKSVVFAITVTWIAIFNGYDAVPTSTGISQATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|89093955|ref|ZP_01166900.1| probable permease of ABC transporter [Oceanospirillum sp. MED92] gi|89081841|gb|EAR61068.1| probable permease of ABC transporter [Oceanospirillum sp. MED92] Length = 259 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 61/251 (24%), Positives = 122/251 (48%), Gaps = 1/251 (0%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + G + + + L++Q+Y+VGV + ++++ G Sbjct: 7 LGRHGLDRLAAFGRSSMILFQALVAKPQPLMMFPLLVQQIYFVGVLSLIIIVVSGLFIGM 66 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+ QG L +G+E ++++ +RE+ ++TA++ AGR+GSA+ AEIG MK E+ Sbjct: 67 VLGLQGYTILVDYGSEQAVGQMVALSLVRELAPVVTALLFAGRAGSALTAEIGLMKATEQ 126 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 + ++ +G+D +R +I+PR WA I LP+L+ + + G ++V + I F++ Sbjct: 127 LSSLEMIGVDPLRRIIAPRFWAGFICLPILSAIFAIVGVYGGALVSIDWLGIYDGSFWAN 186 Query: 301 FHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 ++ ++ GL+KA + +A+ +G+ S + + T VV S V+ Sbjct: 187 MQNSVNFYEDVMNGLVKAVVFGFVVTWIAVFQGYDCIPTSEGISQATTKTVVYSSLAVLG 246 Query: 360 IDSLFAIFYFA 370 +D + F Sbjct: 247 LDFILTAVMFG 257 >gi|237749420|ref|ZP_04579900.1| ABC transport system permease [Oxalobacter formigenes OXCC13] gi|229380782|gb|EEO30873.1| ABC transport system permease [Oxalobacter formigenes OXCC13] Length = 258 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 65/265 (24%), Positives = 127/265 (47%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N ++G K K I++ I + + + Q++++G Sbjct: 1 MSNFVSNLGYKTRKLIDNIGYATRIFATMFKALPQILKRP-------RLITDQIFFIGNK 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++ + G V+ QG + L ++G+E ++++ RE+G ++TA++ AGR+G+ Sbjct: 54 SLLIICVSGLFVGFVLGLQGYYILIRYGSEQALGVMVALSLTRELGPVVTALLYAGRAGT 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 ++ AEIG MK E++ A+ M ++ V +++PR WA IIS+PLL L + + +IG IV Sbjct: 114 SLTAEIGLMKAGEQLAAMDMMAVNPVDRILAPRFWAGIISMPLLATLFSAAGVIGGYIVG 173 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + F+S+ + +I G+IK+ A+ +A+ +G+ + Sbjct: 174 VVLIGVDDGAFWSQMQQGVDIWNDIGNGVIKSLVFGFAVTFMALFQGYEARPTPEGVSSA 233 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV S +V+ +D + F Sbjct: 234 TTRTVVYSSLLVLWLDFIMTALMFN 258 >gi|145630177|ref|ZP_01785959.1| hypothetical protein CGSHi22421_08998 [Haemophilus influenzae R3021] gi|260581861|ref|ZP_05849657.1| ABC transporter permease [Haemophilus influenzae NT127] gi|144984458|gb|EDJ91881.1| hypothetical protein CGSHi22421_08998 [Haemophilus influenzae R3021] gi|260095054|gb|EEW78946.1| ABC transporter permease [Haemophilus influenzae NT127] Length = 261 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 78/267 (29%), Positives = 136/267 (50%), Gaps = 8/267 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N +GK+++ F +L G + + L++QM+ +GV Sbjct: 2 IVNFISTLGKQVIDFFRALGRAGFML------FGALIGKP-QIRKHFPLLVKQMHVLGVQ 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + +++L G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GS Sbjct: 55 SLLIILLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGS 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+P+L+IL I G S+V Sbjct: 115 ALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPILSILFIAIGIWGGSLVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + + F+S ++ + + +I G IKA F A A+ +A+ G+ S + + Sbjct: 175 VDWKGVDSGSFWSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYDCMPTSEGISQA 234 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAIG 372 T VV + +V+ +D + F G Sbjct: 235 TTRTVVHASLVVLGLDFILTAIMFGAG 261 >gi|67926111|ref|ZP_00519354.1| Protein of unknown function DUF140 [Crocosphaera watsonii WH 8501] gi|67852045|gb|EAM47561.1| Protein of unknown function DUF140 [Crocosphaera watsonii WH 8501] Length = 263 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 67/248 (27%), Positives = 116/248 (46%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 L I G+ K K + + QM VG + + ++ + G V Sbjct: 9 RGLGIWFERLIAAILLGGQVFFHLLKTKIHRRNTLDQMSVVGPESLTIALITAGFVGMVF 68 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 Q A + FGA ++++ RE+ +LTAV++AGR GSA AEIG+M++ E+ID Sbjct: 69 TIQVAREFISFGAASTVGGVLALALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQID 128 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ + D V L+ PR+ A + LP+L IL+ + + G ++ YDI VF + Sbjct: 129 ALYMLKTDPVDYLVVPRVLACCLMLPVLNILSLITGMTGGLLIANGLYDISPYVFLTSIR 188 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + L ++ T +IK+ I ++ G + +G+ TT VV ++ V +++ Sbjct: 189 NFLELWDLVTSVIKSVAFGGLIAVIGCSWGLTTTGGAKGVGQSTTTAVVTALLAVFVVNF 248 Query: 363 LFAIFYFA 370 + F Sbjct: 249 FLSWVMFQ 256 >gi|261868147|ref|YP_003256069.1| ABC transporter permease [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413479|gb|ACX82850.1| conserved ABC-type transport system protein, permease component [Aggregatibacter actinomycetemcomitans D11S-1] Length = 261 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 76/265 (28%), Positives = 133/265 (50%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 NL +G+ + F +L G + LI+Q++ +GV Sbjct: 2 LTNLISALGRNAINFARAMGRAGFLL------FGALIGKP-QINKHFPLLIKQLHVLGVQ 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + +++L G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GS Sbjct: 55 SLLIIMLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGS 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ ++ M +D +R +I+PR WA +I++P+L+I+ I G S+V Sbjct: 115 ALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPILSIIFIAIGIWGGSLVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + + F+S S+ T + +I G IK+ F A A+ +A+ G+ S + K Sbjct: 175 VDWKGVDSGSFWSVMQSSVTWSHDILNGFIKSLFFAIAVVWIALFNGYDCIPTSEGISKA 234 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + +++ +D + F Sbjct: 235 TTRTVVHASLVILGLDFVLTAIMFG 259 >gi|307824571|ref|ZP_07654796.1| protein of unknown function DUF140 [Methylobacter tundripaludum SV96] gi|307734555|gb|EFO05407.1| protein of unknown function DUF140 [Methylobacter tundripaludum SV96] Length = 260 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 67/265 (25%), Positives = 117/265 (44%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 +G K L +S L+ QM+ +GV Sbjct: 1 MIEFLQQLGIKTRTSFTKLGRGTFFLLQTMSGVLSVLPRP-------RLLLNQMHSIGVL 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 ++ + G V+ QG + LS FGAE +++ +RE+G +++A++ AGR+GS Sbjct: 54 SFLIITISGLFVGMVLGLQGYYTLSDFGAEESLGVMVAASLVRELGPVVSALLFAGRAGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ + M +D ++ +ISPR A +S+PLL L + IIG +V Sbjct: 114 ALTAEIGLMKATEQLSGMEMMAVDPIKRIISPRFLAGFLSMPLLAALFSAVGIIGGQLVG 173 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + ++S+ + +I G+IK+ +A+ EG+ S + + Sbjct: 174 SGLLGVDEGAYWSQMQAKLDFQDDIINGVIKSIVFGFVASWIALFEGYDAIPTSEGVSRA 233 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV S ++ +D + F Sbjct: 234 TTRTVVNSAFSILGLDFILTTLMFG 258 >gi|187250741|ref|YP_001875223.1| ABC transporter-like protein [Elusimicrobium minutum Pei191] gi|186970901|gb|ACC97886.1| ABC transporter related [Elusimicrobium minutum Pei191] Length = 258 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 78/265 (29%), Positives = 141/265 (53%), Gaps = 8/265 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG++I+ F N+ ++L + +++ ++Q +G++ + Sbjct: 1 MFAVIGREIIIFFNECGKAFNMLRSC---MFWLFKAPFEW----AQAMQQSVTIGINSLT 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAE-IFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 V L S TG V+A QG +S +E +F L+S +RE+G +LTAV++ GR+G+A+ Sbjct: 54 VTTLTSIFTGMVLALQGGNTISNILSEPMFVGTLVSFSLIRELGPVLTAVVVVGRAGAAV 113 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG+M++ E+IDA+ T+G + VR L+ PR++A ++++P+LT+ ANFS I G +V Sbjct: 114 TAEIGTMQVTEQIDALYTLGTNPVRQLVLPRMFAFMLTVPILTLFANFSGIFGGYLVAVH 173 Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 +P + + + G IK+ F A +G V +G + +G+ T Sbjct: 174 GLGVPDVTYLEDITNYMNTLDFMHGFIKSIFFAFMVGTVCCYKGLDTKGGAEGVGRSTTI 233 Query: 349 CVVQSISIVIIIDSLFAIFYFAIGI 373 VV S+ +++++D A GI Sbjct: 234 AVVTSMVLILVLDYFLTAILTAFGI 258 >gi|121534945|ref|ZP_01666764.1| protein of unknown function DUF140 [Thermosinus carboxydivorans Nor1] gi|121306544|gb|EAX47467.1| protein of unknown function DUF140 [Thermosinus carboxydivorans Nor1] Length = 256 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 68/263 (25%), Positives = 124/263 (47%), Gaps = 9/263 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + +G+ ++ + + + I + F L +RQ ++GV Sbjct: 2 LIPMLEKLGRTVLVQLETTGRVILLFTETIYHLRRF---------NLKLTLRQAAHLGVD 52 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +P+V+L TG V+ Q A + ++GA+ ++++ RE+ +LT V+ AGR G+ Sbjct: 53 SLPIVLLTILFTGMVMTVQTAHEFIKYGAQSSVGGVVAVAMGRELAPVLTGVVAAGRVGA 112 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 AI AEIGSMK+ E+IDA+R M + + L+ PR+ A + LP+L + A+ G +V Sbjct: 113 AITAEIGSMKVTEQIDALRVMATNPIAYLVVPRLVACVFMLPILVVFADVIGTFGGYLVA 172 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 Y I + + ++ GLIKA I I+ +G + +G+ Sbjct: 173 TLYAGIGSFTYLHSIKVFTAINDVTGGLIKAMVFGAIIAIIGCYKGLTTDEGAEGVGRAT 232 Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369 T VV SI ++ + + ++ + Sbjct: 233 TGSVVASIILIFVTNYFLSLLLY 255 >gi|302328064|gb|ADL27265.1| putative ABC transporter, permease protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 364 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 81/353 (22%), Positives = 155/353 (43%), Gaps = 16/353 (4%) Query: 21 SEIADDVVMAINKSIQSDSAIVDLSAITEIDT---IGAELIMYFMEKYHGKIKLQGVSTH 77 + + ++ + ++ +D S++ +D L+ EK K+ L+ Sbjct: 24 AANSKKLLSSCKSALTKGELHLDGSSLASMDYSADAFFALLAELSEKTGNKLVLEHFPPE 83 Query: 78 IEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVIS 137 I+Q + RK + +KPQR N+ +G + + +L L+ + Sbjct: 84 IKQHLQNL----RKMVPPEKPQRE-----TNNILEMMGGAGFSLLKEV---FEVLVLLFT 131 Query: 138 NTGEFCASSY-KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE 196 + K K + +QM+ G + + L + +A Q + L+ G Sbjct: 132 AIYWTIVGPFDKGKIHFGGITKQMFKSGSEAMGICFLFVGLICLTMALQSSVMLNAVGGG 191 Query: 197 IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILI 256 + + L EIG LLT +++AGRSGSA+ AEI +M + EE+ A+++M + V+ L+ Sbjct: 192 SYLASGLGFLIFAEIGPLLTTIILAGRSGSAMAAEIANMSVCEEVKALKSMAIPPVQYLV 251 Query: 257 SPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316 PR AL I+ P+L+ A+ ++ + + DI F+ + IK Sbjct: 252 VPRFIALSITTPILSFSASIVGSFAGFLIAYFFCDISFSNYMMGLRDGIDPMTFLKSTIK 311 Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 A + ++A +G + ++GK T+ VV +I ++I D+LFA ++ Sbjct: 312 ALVFGWIVTLIACNKGLNAHGGAEAVGKATTSSVVAAICTIVISDTLFAFIFY 364 >gi|213966604|ref|ZP_03394755.1| membrane protein [Pseudomonas syringae pv. tomato T1] gi|301383114|ref|ZP_07231532.1| putative ABC transport system permease protein [Pseudomonas syringae pv. tomato Max13] gi|302058647|ref|ZP_07250188.1| putative ABC transport system permease protein [Pseudomonas syringae pv. tomato K40] gi|302133824|ref|ZP_07259814.1| putative ABC transport system permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928454|gb|EEB61998.1| membrane protein [Pseudomonas syringae pv. tomato T1] gi|330877179|gb|EGH11328.1| hypothetical protein PSYMP_16986 [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330964018|gb|EGH64278.1| hypothetical protein PSYAC_05120 [Pseudomonas syringae pv. actinidiae str. M302091] gi|331016694|gb|EGH96750.1| hypothetical protein PLA106_11700 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 265 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 69/267 (25%), Positives = 138/267 (51%), Gaps = 8/267 (2%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 S + +G+ + + L + G +S L++Q+Y VG Sbjct: 4 KSLMDRVRLLGRSAIDIVAVLGRSGLFLVHALLGRGGAGSS-------FQLLVKQLYSVG 56 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V + ++++ G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+ Sbjct: 57 VMSLVIIVVSGMFIGMVLALQGFSILAKYGSEQAVGQMVALTLLRELGPVVTALLFAGRA 116 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA ISLP+L ++ + I GAS Sbjct: 117 GSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFSVVGIWGASW 176 Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 V + + F+S ++ + ++ G+IK+ A + +A+ +G+ S + Sbjct: 177 VAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCDPTSEGIS 236 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370 + T VV + V+ +D + F Sbjct: 237 RATTKTVVYASLAVLGLDFILTALMFG 263 >gi|237798606|ref|ZP_04587067.1| hypothetical protein POR16_07195 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021459|gb|EGI01516.1| hypothetical protein POR16_07195 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 265 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 70/267 (26%), Positives = 138/267 (51%), Gaps = 8/267 (2%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 S + +G+ + + L + G +S LI+Q+Y VG Sbjct: 4 KSLMDRVRLLGRSAIDIVAVLGRSGLFLVHALLGRGGAGSS-------FQLLIKQLYSVG 56 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V + ++++ G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+ Sbjct: 57 VMSLVIIVVSGVFIGMVLALQGFSILAKYGSEQAVGQMVALTLLRELGPVVTALLFAGRA 116 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA ISLP+L ++ + I GAS Sbjct: 117 GSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFSVVGIWGASW 176 Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 V + + F+S ++ + ++ G+IK+ A + +A+ +G+ S + Sbjct: 177 VAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCDPTSEGIS 236 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370 + T VV + V+ +D + F Sbjct: 237 RATTRTVVYASLAVLGLDFILTALMFG 263 >gi|329297311|ref|ZP_08254647.1| hypothetical protein Pstas_13477 [Plautia stali symbiont] Length = 260 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 121/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + G F+ L++Q+Y VGV + ++++ Sbjct: 4 QALASLGRQGINTYAAFGRASLMLFHALVGKPAFRKHAPLLVKQLYSVGVLSLLIIVVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE L+++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R ++SPR WA IS+PLL ++ I G ++V + I Sbjct: 124 KATEQLSSMEMMAVDPLRRVVSPRFWAGFISMPLLALIFTAVGIAGGALVGVAWKGIDPG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + ++ LIK+ A + +A+ G+ S + + T VV + Sbjct: 184 FFWSTMQNAVDFRTDVINCLIKSAVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|146313264|ref|YP_001178338.1| hypothetical protein Ent638_3630 [Enterobacter sp. 638] gi|145320140|gb|ABP62287.1| protein of unknown function DUF140 [Enterobacter sp. 638] Length = 260 Score = 230 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 75/255 (29%), Positives = 123/255 (48%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++I+ Sbjct: 5 ALAALGHRGIKTIRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGL 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLTIL I G S+V ++ I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTILFVAVGIWGGSLVGVQWKGIDAGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S L ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 185 FWSAMQDAVDLRMDLVNCLIKSVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|16329621|ref|NP_440349.1| hypothetical protein slr1045 [Synechocystis sp. PCC 6803] gi|81670420|sp|P73009|Y1045_SYNY3 RecName: Full=Probable ABC transporter permease protein slr1045 gi|1652104|dbj|BAA17029.1| slr1045 [Synechocystis sp. PCC 6803] Length = 263 Score = 230 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 65/239 (27%), Positives = 113/239 (47%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 L TG+ + + + + QM VG + + ++ + G V Q A + Sbjct: 17 LVAAFFLTGQVFLHILQGRINRRNTLEQMNMVGPESMAIALITAGFVGMVFTIQVAREFI 76 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 +GA ++S+ RE+ +LTAV+IAGR GSA AEIG+M++ E++DA+ + D Sbjct: 77 YYGATTTIGGVLSLSLTRELAPVLTAVVIAGRVGSAFAAEIGTMRVTEQLDALYMLRTDP 136 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 + L+ PR+ A + LP+LT L+ F + G ++ Y I +F + + L ++F Sbjct: 137 IDYLVVPRVIACGLMLPILTGLSLFVGMAGGLVISSSLYAINPTIFLNSVQNFTQLWDVF 196 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 L K+ I I+ G + +G+ TT VV S+ + I + + F Sbjct: 197 ACLFKSLVFGVIIAIIGCSWGLTTTGGAKGVGESTTTAVVTSLLAIFISNFFLSWLMFQ 255 >gi|114769304|ref|ZP_01446930.1| ABC transporter, inner membrane subunit [alpha proteobacterium HTCC2255] gi|114550221|gb|EAU53102.1| ABC transporter, inner membrane subunit [alpha proteobacterium HTCC2255] Length = 259 Score = 230 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 60/254 (23%), Positives = 120/254 (47%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K + + + +G ++ + + ++ Q+ +G +PVV L + Sbjct: 6 KLLRSIGSSVLAFCSSVGRIVIFALNAILHLVRPPFYGREVLSQLMQIGFYSLPVVGLTA 65 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 TGA +A Q +F AE +++I +RE+G +L +M+AGR S+I AE+G+M Sbjct: 66 LFTGAALALQIYSGGVRFSAESVVPSIVAIGMVRELGPVLGGLMVAGRVSSSIAAELGTM 125 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 ++ E++DA+ T+ D ++ L++PR+ A I++P+L + + I+G +V Sbjct: 126 RVTEQLDALVTLSTDPMKYLVAPRVLAATIAMPILVAVGDTIGILGGYLVGTGRLGFNSN 185 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + L +I +GL KA I ++ G+ G + +GK VV + Sbjct: 186 NYLQNTVDFMELEDITSGLAKAAVFGFIIALMGCYHGYNSGRGAQGVGKATINAVVSASV 245 Query: 356 IVIIIDSLFAIFYF 369 +++ + + +F Sbjct: 246 MILAANYVLTEAFF 259 >gi|149200416|ref|ZP_01877432.1| ABC-type transport system, permease component [Lentisphaera araneosa HTCC2155] gi|149136485|gb|EDM24922.1| ABC-type transport system, permease component [Lentisphaera araneosa HTCC2155] Length = 265 Score = 230 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 78/265 (29%), Positives = 135/265 (50%), Gaps = 2/265 (0%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 KNL G+ V F +S + +G V + +K K S + M G Sbjct: 1 MKNLVSSFGRNFVGFFQESKNILAFIGEVTEELIFGIRNPHKIK--WKSTLYYMDGCGRE 58 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +V LI F+ G ++ Q A Q+ QFG +I+ +L+ + ++E+G L+ A++ GR+GS Sbjct: 59 ATGIVALICFLMGLILGFQSAVQMKQFGTDIYVANLVGLSIVKELGPLMVAMIATGRAGS 118 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A AE+G+M++NEEIDA+ TMG R LI P++ A+++ +P+LT++ + I+G V Sbjct: 119 AFAAELGTMRVNEEIDALTTMGFVPPRFLIIPKLIAMMVVMPILTLIGDLLGILGGFFVG 178 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 +PF + ++ ++ + KA A I +V G + +GK Sbjct: 179 VVQLKLPFIAYLNQTIKAIHYLDVMESMAKAFAFAIIISMVGCYRGMNSSSDAQGVGKAA 238 Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371 T+ VV I ++I+ D+L I + + Sbjct: 239 TSSVVSGIFLIIVADTLMTIIFTQL 263 >gi|313200036|ref|YP_004038694.1| hypothetical protein MPQ_0269 [Methylovorus sp. MP688] gi|312439352|gb|ADQ83458.1| conserved hypothetical protein [Methylovorus sp. MP688] Length = 259 Score = 230 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 69/263 (26%), Positives = 133/263 (50%), Gaps = 8/263 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + +G +I+ + S A + +GE + IR++Y+ GV Sbjct: 1 MAEVLRGMGHRIIDRVWRLGSGARFFVYTLIYSGESFRRIH-------LTIREIYFTGVM 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++++ +F G V+A QG L ++G+ L+++ +RE+G ++TA++ AGR+G+ Sbjct: 54 SLLIILVSAFFVGMVLALQGYNTLQKYGSSEAIGVLVALSLVRELGPVVTALLFAGRAGT 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 AI AEIG MK E++ A+ M + + +++PR WA ++S+PLL L + ++G +V Sbjct: 114 AITAEIGLMKTTEQLSAMEMMAVSPIARVVAPRFWAGVVSMPLLAALFSMVGVLGGYLVA 173 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + F+S+ ++ +I G+IK+ A ++A+ EGF + + + Sbjct: 174 VPVIGVDNGAFWSQMQASVDFQADIVNGVIKSVVFGVACTMIALFEGFDAPPTAEGVSRA 233 Query: 346 VTTCVVQSISIVIIIDSLFAIFY 368 T VV S V+ +D + F Sbjct: 234 TTRTVVNSSLAVLGLDFILTSFM 256 >gi|317046704|ref|YP_004114352.1| hypothetical protein Pat9b_0470 [Pantoea sp. At-9b] gi|316948321|gb|ADU67796.1| protein of unknown function DUF140 [Pantoea sp. At-9b] Length = 260 Score = 230 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 121/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + G F+ L++Q+Y VGV + ++++ Sbjct: 4 QALASLGRQGINTCAAFGRAGMMLFHALVGKPAFRKHAPLLVKQLYSVGVMSLLIIMVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE L+++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R ++SPR WA IS+PLL ++ I G ++V + I Sbjct: 124 KATEQLSSMEMMAVDPLRRVVSPRFWAGFISMPLLALIFTAVGIAGGALVGVSWKGIDPG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + +I +IK+ A + +A+ G+ S + + T VV + Sbjct: 184 FFWSAMQNAVDFRTDIINCIIKSAVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|237747263|ref|ZP_04577743.1| ABC transport system permease [Oxalobacter formigenes HOxBLS] gi|229378614|gb|EEO28705.1| ABC transport system permease [Oxalobacter formigenes HOxBLS] Length = 258 Score = 230 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 67/265 (25%), Positives = 129/265 (48%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N ++G K K IND I +I + + Q++++G Sbjct: 1 MSNFISNLGYKTRKSINDIGYATRIFLSLIRALPQVLKRP-------RLITDQIFFIGNK 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++ + G V+ QG + L ++G+E L+++ RE+G ++TA++ AGR+G+ Sbjct: 54 SLIIICVSGLFVGFVLGLQGYYILVRYGSEQALGVLVTLALTRELGPVVTALLYAGRAGT 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 ++ AEIG MK E++ A+ M ++ V+ +++PR WA I+S+P+L L + + +IG IV Sbjct: 114 SLTAEIGLMKAGEQLAAMDMMAVNPVKRILAPRFWAGIVSMPILATLFSAAGVIGGYIVG 173 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + F+S+ + +I G+IK+ A+ +A+ +G+ + Sbjct: 174 VILIGVDDGAFWSQMQEGVDIWNDIGNGVIKSLVFGFAVTFMALFQGYESRPTPEGVSSA 233 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV S +V+ +D + F Sbjct: 234 TTRTVVYSSLLVLWLDFIMTALMFN 258 >gi|238789753|ref|ZP_04633535.1| hypothetical protein yfred0001_29030 [Yersinia frederiksenii ATCC 33641] gi|238722112|gb|EEQ13770.1| hypothetical protein yfred0001_29030 [Yersinia frederiksenii ATCC 33641] Length = 235 Score = 230 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 69/233 (29%), Positives = 118/233 (50%), Gaps = 1/233 (0%) Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198 + + L++Q+Y VGV + ++++ G V+ QG L+ + AE Sbjct: 2 LFNALVGRPEPRKQWPLLLKQLYSVGVQSLLIIVVSGLFIGMVLGLQGFLILTTYSAEAS 61 Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258 ++S+ LRE+G ++TA++ AGR+GSA+ AEIG MK E+I ++ M +D +R +++P Sbjct: 62 LGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQISSLEMMAIDPLRRVVAP 121 Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKA 317 R WA +IS+PLLT + I G S+V + I F+S S ++ LIK+ Sbjct: 122 RFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDGGFFWSAMQSAVEWRTDLLNCLIKS 181 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 A + +A+ G+ S + + T VV S V+ +D + F Sbjct: 182 LVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 234 >gi|170728557|ref|YP_001762583.1| hypothetical protein Swoo_4232 [Shewanella woodyi ATCC 51908] gi|169813904|gb|ACA88488.1| protein of unknown function DUF140 [Shewanella woodyi ATCC 51908] Length = 260 Score = 230 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 77/255 (30%), Positives = 127/255 (49%), Gaps = 2/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 ++ + G A + KGF L ++Q+Y VGV + ++ + Sbjct: 6 RVANLGRAAIELVIGFGSAGLMLWGAIARKPRAKGFPL-FVKQLYVVGVQSMVLIFVSGL 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L FG E ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 65 FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +I+PR WA ++SLPLL ++ I G IV ++ I Sbjct: 125 STEQLSSLEMMAIDPLRQIIAPRFWAGVVSLPLLALIFTAVGIYGGHIVGVEWKGIDSGS 184 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ +I LIK+ A + +A+ G+ V + + K T VVQS Sbjct: 185 FWSILQASVEWRQDIVNCLIKSLVFAVVVTWIALYRGYQVIPNPEGISKATTQTVVQSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D L F Sbjct: 245 AVLALDFLLTALMFG 259 >gi|77918062|ref|YP_355877.1| toluene export protein [Pelobacter carbinolicus DSM 2380] gi|77544145|gb|ABA87707.1| ABC-type toluene export protein [Pelobacter carbinolicus DSM 2380] Length = 269 Score = 230 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 66/266 (24%), Positives = 130/266 (48%), Gaps = 6/266 (2%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 L +G+ K + G + S + ++RQ++++G Sbjct: 4 LVQAVGRFFQKLGAEFIFYLEQAGRMGIFLAACLFSVVRPPYKFGPILRQIHFIGSRSSF 63 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V++ TG V+A QG + L +FG+E +++ +RE+G ++ A+M+ GR+GSAI Sbjct: 64 VILFTGSFTGMVLALQGYYTLRKFGSEGLLGAAVALSLIRELGPVIAALMVVGRAGSAIC 123 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AE+G M+ +E+IDA+ M +D + L++P+ A I+S+PLLT + + + I+G +V Sbjct: 124 AEVGIMRNSEQIDALECMAIDPYKYLMAPKFVAGILSMPLLTAIFDMAGIVGGYLVGVAM 183 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV------GVHSNSLG 343 + +F + +S+ ++ GL+K+ I + +G+ + G + + Sbjct: 184 LGVNKGAYFQQMYSSVVWNDVEMGLVKSLIFGLLIIWIGAAKGYYLHLERSGGFGAEGVS 243 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYF 369 + T VV S +++ D L + Sbjct: 244 RVTTDAVVLSSVAILVWDYLLSAIML 269 >gi|254468843|ref|ZP_05082249.1| ABC-type transporter, permease component involved in toluene tolerance [beta proteobacterium KB13] gi|207087653|gb|EDZ64936.1| ABC-type transporter, permease component involved in toluene tolerance [beta proteobacterium KB13] Length = 259 Score = 230 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 70/266 (26%), Positives = 130/266 (48%), Gaps = 8/266 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N IG I I + + +IS + + IR++Y+ GV Sbjct: 1 MLNFFEKIGGAIRSKITRLGAATRLFFSIISYSSDSFKR-------FNLTIREIYFTGVL 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++++ +F G V+ QG + L ++G+ L+++ +RE+G ++TA++ AGR+G+ Sbjct: 54 SLVIIVVSAFFVGMVLGLQGYYTLQKYGSSEAIGVLVALALVRELGPVVTALLFAGRAGT 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 AI AEIG MK E++ A+ M + + +++PR WA II++PLL + + I+G +V Sbjct: 114 AITAEIGLMKATEQLSAMEMMAVSPIARIVAPRFWAGIITMPLLASIFSMVGILGGYVVA 173 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + F+S+ + +I G IK+ A I+A+ EG+ + + + Sbjct: 174 VPMIGVDEGAFWSQMQANVDFNYDIVNGFIKSVVFGIACTIIALFEGYDAPPTAEGVSRA 233 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAI 371 T VV S V+ +D + F + Sbjct: 234 TTRTVVTSSLAVLGLDFVLTSFMLTV 259 >gi|39996998|ref|NP_952949.1| transporter [Geobacter sulfurreducens PCA] gi|39983886|gb|AAR35276.1| transporter, putative [Geobacter sulfurreducens PCA] gi|298506015|gb|ADI84738.1| transporter membrane protein of unknown function DUF140 [Geobacter sulfurreducens KN400] Length = 257 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 73/263 (27%), Positives = 132/263 (50%), Gaps = 9/263 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 + +GKK++ F +LG ++ G + L S+ QM +G V Sbjct: 2 GMFDRVGKKVLSFHE-------VLGEMLMLLGRTVWFFREAPRNLPSIFNQMAIIGYETV 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 P+ +++F G V+A Q +L ++G + ++ + +RE+G ++T+ ++AGR GSA+ Sbjct: 55 PIASVMAFFVGMVLALQTGVELQKYGTQNIIGGIVGLSMVRELGPVMTSFLVAGRVGSAM 114 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG MK+ EEIDA++T+ ++ VR L PR+ A ++ +P L I AN I+G +I+ Sbjct: 115 AAEIGVMKVYEEIDALKTLDINPVRYLAMPRLIACLVCVPALVIFANAVGIVGGAIMSHL 174 Query: 289 Y--YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + I ++ ++ + L + GL+KA I +VA GF + + + Sbjct: 175 HPKIFISYSTYYDSLKTALKLKEVGAGLVKATVFGGIIALVACYTGFKTSGGARGIAQAT 234 Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369 T VV S ++++ D Sbjct: 235 TRAVVLSFMLILVADYFLTRILM 257 >gi|145640771|ref|ZP_01796354.1| hypothetical protein CGSHiR3021_06880 [Haemophilus influenzae R3021] gi|319776661|ref|YP_004139149.1| ABC transporter permease [Haemophilus influenzae F3047] gi|329124179|ref|ZP_08252726.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Haemophilus aegyptius ATCC 11116] gi|145274697|gb|EDK14560.1| hypothetical protein CGSHiR3021_06880 [Haemophilus influenzae 22.4-21] gi|317451252|emb|CBY87486.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae F3047] gi|327467604|gb|EGF13102.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Haemophilus aegyptius ATCC 11116] Length = 261 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 78/267 (29%), Positives = 136/267 (50%), Gaps = 8/267 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N +GK+++ F +L G + + L++QM+ +GV Sbjct: 2 IVNFISALGKQVIDFFRALGRAGFML------FGALIGKP-QIRKHFPLLVKQMHVLGVQ 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + +++L G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GS Sbjct: 55 SLLIILLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGS 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+P+L+IL I G S+V Sbjct: 115 ALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPVLSILFIAIGIWGGSLVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + + F+S ++ + + +I G IKA F A A+ +A+ G+ S + + Sbjct: 175 VDWKGVDSGSFWSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYDCMPTSEGISQA 234 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAIG 372 T VV + +V+ +D + F G Sbjct: 235 TTRTVVHASLVVLGLDFILTAIMFGAG 261 >gi|330958007|gb|EGH58267.1| hypothetical protein PMA4326_05446 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 265 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 69/269 (25%), Positives = 138/269 (51%), Gaps = 8/269 (2%) Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162 S + +G+ + + L + G +S L++Q+Y Sbjct: 2 RKKSLMDRVALLGRSAIDIVAVLGRSGLFLVHALLGRGGAGSS-------FQLLVKQLYS 54 Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 VGV + ++++ G V+A QG L+++G+E ++++ LRE+G ++TA++ AG Sbjct: 55 VGVMSLVIIVVSGIFIGMVLALQGFSILAKYGSEQAVGQMVALTLLRELGPVVTALLFAG 114 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 R+GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA ISLP+L ++ + I GA Sbjct: 115 RAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFSVVGIWGA 174 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341 S V + + F+S ++ + ++ G+IK+ A + +A+ +G+ S Sbjct: 175 SWVAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCDPTSEG 234 Query: 342 LGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D + F Sbjct: 235 ISRATTKTVVYASLAVLGLDFILTALMFG 263 >gi|308051140|ref|YP_003914706.1| hypothetical protein Fbal_3434 [Ferrimonas balearica DSM 9799] gi|307633330|gb|ADN77632.1| protein of unknown function DUF140 [Ferrimonas balearica DSM 9799] Length = 260 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 127/256 (49%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 ++I + + + LG + L LI+Q+Y VGV + ++++ Sbjct: 4 ERIRRLGSGALKWVAGLGRAGLMLVGALVRRPQPGKMLPLLIKQLYQVGVLSMVIILVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L FG E ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYIILVDFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D ++ +I+PR WA +IS+PLL ++ I G +V ++ I Sbjct: 124 KATEQLASMEMMAVDPLQRVIAPRFWAGVISMPLLALMFTTIGIWGGHLVGVEWKGIDPG 183 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ +I LIK+ A + +A+ +G+ + + + T VV + Sbjct: 184 AFWSILTASVEWQKDILNCLIKSVVFAFVVTWIALFKGYDAVPTAEGISRATTETVVHAS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLALDFVLTAVMFG 259 >gi|242241047|ref|YP_002989228.1| hypothetical protein Dd703_3649 [Dickeya dadantii Ech703] gi|242133104|gb|ACS87406.1| protein of unknown function DUF140 [Dickeya dadantii Ech703] Length = 260 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 68/256 (26%), Positives = 120/256 (46%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + S G + L RQ+Y VGV + ++I+ Sbjct: 4 QALASLGRSGISTCASFGRAGLMLFNALVGKPEPAKQWPLLARQLYSVGVQSLLIIIVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 CFIGMVLGLQGYIVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +++PR WA IS+PLLT++ I G ++V + I Sbjct: 124 KATEQLSSMEMMAVDPLRRVVAPRFWAGFISMPLLTLIFVAVGIWGGALVGVDWKGIDSG 183 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ ++K+ F A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQGAVEWRHDVMNCVLKSLFFAMTVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|154253915|ref|YP_001414739.1| hypothetical protein Plav_3483 [Parvibaculum lavamentivorans DS-1] gi|154157865|gb|ABS65082.1| protein of unknown function DUF140 [Parvibaculum lavamentivorans DS-1] Length = 257 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 69/262 (26%), Positives = 129/262 (49%), Gaps = 7/262 (2%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N IG+ ++ + + + + L +S+ + F +QM +G + Sbjct: 2 NFFAVIGRVVLALLGEIGRLSLFVWLSVSHI-------LRPPFFWRLTAQQMLRIGYFSL 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 PVV L +F TG +A Q + + F +E ++++ RE+G +L +M+AGR +AI Sbjct: 55 PVVALTAFFTGGALALQIYYGGNSFNSESIVATIVALGITRELGPVLGGLMVAGRVSAAI 114 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AE+G+M++ E+IDA+ T+ + + L+ PR+ A +I+LPLL ++A+ I+G +V Sbjct: 115 AAELGTMRVTEQIDALTTLSTNPHKYLVVPRVVAAVITLPLLVLVADIIGIMGGYVVGTA 174 Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 D V+ L ++ +GLIKA I ++ GF + +G+ T Sbjct: 175 SLDFNGGVYIKNTADFLKLDDVTSGLIKAAVFGFIIAVMGCFHGFNSKGGAQGVGRATTN 234 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + +++ + + FA Sbjct: 235 AVVTASILILAANYVMTSLLFA 256 >gi|255658873|ref|ZP_05404282.1| toluene tolerance ABC efflux transporter, permease [Mitsuokella multacida DSM 20544] gi|260848821|gb|EEX68828.1| toluene tolerance ABC efflux transporter, permease [Mitsuokella multacida DSM 20544] Length = 256 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 73/263 (27%), Positives = 131/263 (49%), Gaps = 8/263 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + IG +++ + + + G + + K L ++ QM ++GV Sbjct: 2 LLRILSTIGAFVLRRFEELGTIVLLYGETLRAL--------RHKPRLRHILAQMSHLGVD 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + +V L TG VI+ Q A L +FGA+ +++I RE+G +L AV+ AGR GS Sbjct: 54 SLMIVSLTLLFTGVVISLQTADVLIRFGAQGTLGGIVTIAIGRELGPVLVAVVCAGRVGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 AI AEI +MK+ E+IDA+R M + V L+ PR+ A +I +P+LT+ + + G ++ Sbjct: 114 AITAEIATMKVTEQIDALRVMAVSPVDYLLVPRMLACMIVVPILTVFGDVIGVFGGWLIA 173 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 Y + + + H A L ++ G+IKA F I ++ G + +G+ Sbjct: 174 VFYKGLTTYSYMNSIHIFADLFDMTGGVIKAIFFGNVIAVLGCYYGLHCPDGAEGVGRAT 233 Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369 T VV SI ++ +++++ + Sbjct: 234 TKTVVASIIVIFLLNAVLTFLLY 256 >gi|84387816|ref|ZP_00990831.1| putative ABC superfamily transport protein [Vibrio splendidus 12B01] gi|84377331|gb|EAP94199.1| putative ABC superfamily transport protein [Vibrio splendidus 12B01] Length = 259 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 74/256 (28%), Positives = 126/256 (49%), Gaps = 2/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K I + + G + K F L ++Q+Y VGV + ++++ Sbjct: 4 KAIAGVGKRTLAICESFGRASLMLFGALFGIPRLKNFPL-FVKQLYSVGVQSLAIILVSG 62 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V++ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 63 LFIGMVLSLQGYVVLIDYGAEGNLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 122 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D ++ +I+PR+WA +IS+PLL ++ I GA +V + I Sbjct: 123 KATEQISSLEMMAVDPLKRIIAPRLWAGLISMPLLAMIFMAVGIWGAQLVGVDWKGIDHG 182 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S S+ L +I IK A + +A+ G+ S + + T VV S Sbjct: 183 SFWSAMQSSVELGRDIGNSTIKCMVFAITVTWIALFNGYDAVPTSEGISQATTRTVVHSS 242 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 243 LAVLGLDFVLTALMFG 258 >gi|222054639|ref|YP_002537001.1| protein of unknown function DUF140 [Geobacter sp. FRC-32] gi|221563928|gb|ACM19900.1| protein of unknown function DUF140 [Geobacter sp. FRC-32] Length = 258 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 71/265 (26%), Positives = 129/265 (48%), Gaps = 9/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 IG+K++KF +LG + E L S+ QM +G Sbjct: 1 MAGAIDRIGRKVIKFHEIIGEMLILLGQTVYFFREA-------PRNLASIFAQMAIIGYE 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PV +++F G V+A Q +L+++G++ ++ +RE+G ++T+ ++AGR GS Sbjct: 54 TLPVASVMAFFVGMVLALQTGVELNKYGSQDIIGAIVGHSMVRELGPVMTSFLVAGRVGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AE+G MK+ EEIDA++T+ ++ VR L PR A I+ +P L I ++ I+G +I+ Sbjct: 114 AMAAELGVMKVYEEIDALKTLDINPVRYLAMPRFIACIVCVPALVIYSDCIGIVGGAIIS 173 Query: 287 WKY--YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 + + ++ ++ + I GLIKA + +V+ GF + +G Sbjct: 174 NLHPKIFVSYSTYYDSLTAALKFQEIGNGLIKAFVFGAIVALVSCYVGFKTSGGARGIGI 233 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYF 369 T VV S ++++ D Sbjct: 234 STTRSVVWSFMLILVADYFLTRLLM 258 >gi|74313731|ref|YP_312150.1| hypothetical protein SSON_3342 [Shigella sonnei Ss046] gi|73857208|gb|AAZ89915.1| conserved hypothetical protein [Shigella sonnei Ss046] Length = 260 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++++ Sbjct: 5 ALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGV 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLT++ I G S+V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGIWGGSLVGVSWKGIDSGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S + ++ LIK+ A + +++ G+ S + + T VV S Sbjct: 185 FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDTIPTSAGISRATTRTVVHSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|320174559|gb|EFW49695.1| Uncharacterized ABC transporter, permease component YrbE [Shigella dysenteriae CDC 74-1112] Length = 260 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++++ Sbjct: 5 ALASLGHKGIKTLRTFGRTGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGV 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLT++ I G S+V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGIWGGSLVGVSWKGIDSGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S + ++ LIK+ A + +++ G+ S + + T VV S Sbjct: 185 FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|16273014|ref|NP_439243.1| ABC transporter permease [Haemophilus influenzae Rd KW20] gi|260580171|ref|ZP_05848001.1| conserved hypothetical protein [Haemophilus influenzae RdAW] gi|1176838|sp|P45030|Y1086_HAEIN RecName: Full=Probable ABC transporter permease protein HI_1086 gi|1574640|gb|AAC22742.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20] gi|260093455|gb|EEW77388.1| conserved hypothetical protein [Haemophilus influenzae RdAW] Length = 261 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 78/267 (29%), Positives = 136/267 (50%), Gaps = 8/267 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N +GK+++ F +L G + + L++QM+ +GV Sbjct: 2 IVNFISALGKQVIDFFRALGRAGFML------FGALIGKP-QIRKHFPLLVKQMHVLGVQ 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + +++L G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GS Sbjct: 55 SLLIILLSGLFIGMVLGLQGYVVLIDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGS 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+P+L+IL I G S+V Sbjct: 115 ALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPVLSILFIAIGIWGGSLVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + + F+S ++ + + +I G IKA F A A+ +A+ G+ S + + Sbjct: 175 VDWKGVDSGSFWSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYDCMPTSEGISQA 234 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAIG 372 T VV + +V+ +D + F G Sbjct: 235 TTRTVVHASLVVLGLDFILTAIMFGAG 261 >gi|74317917|ref|YP_315657.1| hypothetical protein Tbd_1899 [Thiobacillus denitrificans ATCC 25259] gi|74057412|gb|AAZ97852.1| Protein of unknown function DUF140 [Thiobacillus denitrificans ATCC 25259] Length = 262 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 66/264 (25%), Positives = 126/264 (47%), Gaps = 8/264 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + ++G + + + + ++G +R++Y+ GV Sbjct: 2 LRQAIENLGARTIDAVWRIGFATRFFAATLLHSGTAFRR-------FGLTVRELYFTGVL 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++++ G V+ QG L +G+E L+++ +RE+G ++ A++ A R+GS Sbjct: 55 SLIIILVSGLFVGMVLGLQGYETLQTYGSEEALGILVALSLVRELGPVVAALLFASRAGS 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 AI AEIG MK E++ A+ M +D + +++PR WA +IS+PLL L + + G +V Sbjct: 115 AITAEIGLMKATEQLSAMEMMAVDPIARVVAPRFWAGVISMPLLAALFSAMGVFGGYLVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + + F+S+ S +I G+IK+ AI +A+ EG+ + + + Sbjct: 175 VQLIGVDEGAFWSQMQSAVDFEQDILNGVIKSVVFGVAITAIALFEGYDAPPTAEGVSRA 234 Query: 346 VTTCVVQSISIVIIIDSLFAIFYF 369 T VV S V+ +D + F F Sbjct: 235 TTRTVVTSSLAVLALDFVLTAFMF 258 >gi|23014157|ref|ZP_00053989.1| COG0767: ABC-type transport system involved in resistance to organic solvents, permease component [Magnetospirillum magnetotacticum MS-1] Length = 258 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 63/264 (23%), Positives = 122/264 (46%), Gaps = 7/264 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + IG+ + F+ + + +S+T + + L + +G Sbjct: 1 MTSFLATIGRVFLAFLAHVGRLSAFTAMAVSHT---VRPPFYPRLILREFVE----IGYF 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PVV L + TG V+A Q S+F AE ++ + RE+ +L +M+AGR G+ Sbjct: 54 SLPVVGLTAVFTGMVLALQSYSGFSRFAAEGAVATVVVLSVTRELAPVLAGLMVAGRIGA 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 ++ AEIG+M++ E+IDA+ T+ + + L++PRI A + LP L ++A+ + G IV Sbjct: 114 SMAAEIGTMRVTEQIDALTTLSTNPFKYLVAPRILAGTLMLPFLVLIADIIGVFGGYIVG 173 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 A + +R ++ +GL KA I ++ G+ + +G Sbjct: 174 VYKLGFNSATYIARTWEFLEPLDVISGLTKAAVFGFLITLMGCYNGYYSKGGAQGVGAAT 233 Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370 T VV + ++++ + + +F Sbjct: 234 TNAVVSAAIMILVFNYIITAMFFG 257 >gi|108762257|ref|YP_631903.1| putative ABC transporter permease [Myxococcus xanthus DK 1622] gi|108466137|gb|ABF91322.1| putative ABC transporter, permease protein [Myxococcus xanthus DK 1622] Length = 271 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 69/254 (27%), Positives = 125/254 (49%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + +F LG +I+ + S + L++L Q+ +VGV + +V L Sbjct: 18 QAVTRFGQGLIDIVSTLGGIITMGLDVFRWSVRRPFRLVNLFAQLDFVGVGSIFIVSLTG 77 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 TG V A Q + F AE +++ RE+ + +A+M+ R+GSA+ E+G+M Sbjct: 78 TFTGMVFALQTSTAFQLFDAESLVGPTVALTLTRELAAVFSALMVTMRAGSAMCTELGTM 137 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 ++ E++DA+ TM ++ V+ L+ PR+ A + +P LT+L N + GA +V I Sbjct: 138 RVTEQVDALETMAVNPVQYLLVPRVLAGLFMVPALTMLFNTMGMGGAYVVAVGGLGISPG 197 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F SR +IF GL+K ++ ++ +GF + +G+ T +V S Sbjct: 198 TFLSRTQQWLAPEDIFQGLLKGAVFGLSVSLICCFKGFNASGGAKGVGQATTEAMVASAL 257 Query: 356 IVIIIDSLFAIFYF 369 + I+D + I +F Sbjct: 258 SIFILDFILGILFF 271 >gi|197120798|ref|YP_002132749.1| hypothetical protein AnaeK_0378 [Anaeromyxobacter sp. K] gi|196170647|gb|ACG71620.1| protein of unknown function DUF140 [Anaeromyxobacter sp. K] Length = 370 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 90/367 (24%), Positives = 159/367 (43%), Gaps = 14/367 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 +G W ++ + + + + ++D S + +DT GA L+ Sbjct: 16 VHCSGAWTVHLVAGLDRALRRLAWP--EHVAVVIDASGVAAMDTAGAWLLRRAARDLERG 73 Query: 69 IKLQGVS--THIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 + ++ E L +L++ + +G+ Sbjct: 74 GRPVTLTLRPEHEALLALVTSSGEVAP--------RRARERARFLSELGRSAWSSALAIG 125 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 ++G + A + + + + G +P L+SF G V+A QG Sbjct: 126 GVLTLVGELAGRVARARAGPLRVRA--RQAVLHVQSAGFEALPTTALLSFFVGVVLASQG 183 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A L FGA I DL+ + LRE+ L+TA+++AGRSGSA A+IG+MK+ EI+++R Sbjct: 184 ATLLRPFGAGILIADLVGLAMLRELSPLVTAIVVAGRSGSAYAAQIGAMKMAGEIESLRA 243 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 G+ V L+ PRI AL + +PLLT+ A+ + GA++V + F R Sbjct: 244 GGVSPVDALVVPRIAALALVVPLLTVAADVLGLAGATLVARAELGMHAPEFLGRVAREVH 303 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 ++ G+ KAP + V +G + S+G++ T VVQS+ +V++ D L + Sbjct: 304 ASSYLLGVAKAPVFGVIVAAVGCHQGLRASDDAGSVGRRTTGAVVQSMFLVVLADGLVLV 363 Query: 367 FYFAIGI 373 +GI Sbjct: 364 VSRQLGI 370 >gi|27363501|ref|NP_759029.1| putative ABC transport system permease [Vibrio vulnificus CMCP6] gi|27359617|gb|AAO08556.1| Putative ABC transport system permease protein [Vibrio vulnificus CMCP6] Length = 357 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 96/356 (26%), Positives = 166/356 (46%), Gaps = 17/356 (4%) Query: 16 KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG---KIKLQ 72 S + + + ++ S + +V+ +T ID G + ++ +I + Sbjct: 15 TSEIVGNLWEKANRILDTHPNS-AIVVNAHNLTFIDISGIAFLSDLQTRFRAPGAEISIV 73 Query: 73 GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHIL 132 G+ + +L + +G+ + + D S A + Sbjct: 74 GLKPSLAELV----------PPAPVENNPSIVGRERGFFERVGRATKEMLIDVGSVARFV 123 Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 S + ++ G VP+++LI F+ G +IA + Q Sbjct: 124 KDC--AVVFKIGISRRKNVNWATVSDIASRAGADAVPIIMLIGFLMGVIIAFEIGLVAEQ 181 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 FGA +F D + I LRE+G L+TA++ AGR+G+A AEIG+ K+NEEI+A+RT G+ V Sbjct: 182 FGAVLFVADGIGISMLRELGPLMTAIVFAGRTGAAFAAEIGTQKVNEEINALRTFGISPV 241 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 L+ PRI+A I+ LPLLT+ A+ + G ++V+ K+ DI F ++ + S ++ + Sbjct: 242 EFLVIPRIYASILVLPLLTVFADIIGVFGGALVLLKF-DISFVQYYHQLLSALSIWDFGF 300 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 GLIKA I ++ + G A G S S+G T+ VV SI +++ID F + Sbjct: 301 GLIKATTFGFIIAVIGCERGLATGQGSTSVGLAATSAVVSSIIWIVVIDGFFTVLL 356 >gi|260596176|ref|YP_003208747.1| hypothetical protein CTU_03840 [Cronobacter turicensis z3032] gi|260215353|emb|CBA27350.1| UPF0393 inner membrane protein yrbE [Cronobacter turicensis z3032] Length = 262 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 77/265 (29%), Positives = 131/265 (49%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 NL +G++ +KF + G +F+ L+RQ+Y+VGV Sbjct: 4 LLNLLASMGQRGLKF-------SASFGRAGLMLFNAIVGKPEFRKHGPLLVRQLYHVGVL 56 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++I+ G V+ QG L+ +GAE L+++ LRE+G ++ A++ AGR+GS Sbjct: 57 SMIIIIVSGLFIGMVLGLQGYLVLTTYGAETSLGMLVALSLLRELGPVVAALLFAGRAGS 116 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ ++ M +D +R +ISPR WA +ISLPLLT++ + G S+V Sbjct: 117 ALTAEIGLMKATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGVWGGSLVG 176 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + I F+S ++ LIK+ A + +A+ G+ S + + Sbjct: 177 VNWKGIDAGFFWSAMQDAVDWRMDLINCLIKSVVFAITVTWIALFNGYDAIPTSAGISRA 236 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + V+ +D + F Sbjct: 237 TTRTVVHASLAVLGLDFVLTALMFG 261 >gi|320103291|ref|YP_004178882.1| hypothetical protein Isop_1750 [Isosphaera pallida ATCC 43644] gi|319750573|gb|ADV62333.1| protein of unknown function DUF140 [Isosphaera pallida ATCC 43644] Length = 280 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 64/252 (25%), Positives = 124/252 (49%), Gaps = 7/252 (2%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170 +G++I+ +++ S + G A + L+ + +GV +PV Sbjct: 15 LTRVGERIITMVSEFGSWVQF---SAATLGWMVARPPR----RSHLVPNFFTIGVRSLPV 67 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 V + G V++ Q + G E +++I ++E+G +L A M+AGR GSA+ A Sbjct: 68 VAVTGLFIGMVLSVQSFNSFKEMGLETRLGSVVNISLVKELGPVLAATMLAGRVGSAMAA 127 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 E+G+M++ E+IDA+ +G++ + L+ PR A ++ +P LT++A+F+ +G S V K Sbjct: 128 ELGTMRVTEQIDALHALGVNPIAYLVVPRFLACVVLIPALTLVADFAGALGGSFVSVKML 187 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 + ++ S ++ GL K+ F AI +++ GF + +G+ T Sbjct: 188 GVDGYYYWKHSQSFVEPLDVVAGLFKSVFFGAAIALISCHRGFHSKGGAEGVGQAATEAF 247 Query: 351 VQSISIVIIIDS 362 V S ++ +D Sbjct: 248 VSSFIAILFLDF 259 >gi|212633565|ref|YP_002310090.1| hypothetical protein swp_0685 [Shewanella piezotolerans WP3] gi|212555049|gb|ACJ27503.1| Conserved hypothetical protein [Shewanella piezotolerans WP3] Length = 235 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 72/230 (31%), Positives = 121/230 (52%), Gaps = 1/230 (0%) Query: 142 FCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSID 201 A + K L L +Q+Y +GV + ++++ G V+A QG L FG E Sbjct: 5 AIAHRPRLKKGLPLLTKQLYVIGVQSMVIILVSGLFIGMVLALQGYNILVGFGTEESLGP 64 Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261 ++++ LRE+G ++TA++ AGR+GSA+ AE+ MK E++ ++ M +D +R +I+PR W Sbjct: 65 MVALSLLRELGPVVTALLFAGRAGSALTAELALMKSTEQLSSLEMMAVDPLRQIIAPRFW 124 Query: 262 ALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFM 320 A +ISLPLL ++ I G IV ++ I F+S S+ +I +IK+ Sbjct: 125 AGVISLPLLALMFTAIGIYGGHIVGVEWKGIDSGAFWSILQSSVEWRQDIVNCMIKSLLF 184 Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 A + +A+ G+ V + + + T VVQS V+ +D L F Sbjct: 185 AVVVTWIALYRGYHVIPNPEGISRATTQTVVQSSLAVLALDFLLTAMMFG 234 >gi|78485324|ref|YP_391249.1| hypothetical protein Tcr_0980 [Thiomicrospira crunogena XCL-2] gi|78363610|gb|ABB41575.1| ATP-binding cassette (ABC) superfamily transporter, permease component [Thiomicrospira crunogena XCL-2] Length = 261 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 64/266 (24%), Positives = 126/266 (47%), Gaps = 8/266 (3%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 N +G+ ++ A + ++ L L++Q+Y+ G Sbjct: 2 NPLFRFLASLGESALRLFTSFGRGAIFILSLLPALPYSILR-------LDLLVKQVYFSG 54 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V +P+++ G V++ QG L + +E + ++ LRE+G ++ A++ AGR+ Sbjct: 55 VLSLPIILTAGLFVGMVLSLQGYNVLVDYNSEEAVGTMTALSLLRELGPVVAALLFAGRA 114 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 GSA+ AEIG M+ E++ A+ M +D ++ + SPR A +I LP+L+++ I G I Sbjct: 115 GSALTAEIGLMRSTEQLSALEMMAIDPLKFVFSPRFTAALIVLPMLSLMFIAMGIFGGYI 174 Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 V + + F+++ + ++ G+IK+ A I I+++ +G+ S + Sbjct: 175 VGVGWLGVDEGAFWTQMNEHVDWNEDVVNGIIKSIAFAVLIAIISLFQGYDAIPTSEGVS 234 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYF 369 + T VV S V+ +D + F Sbjct: 235 RATTRTVVHSSLGVLGLDFILTAIMF 260 >gi|317152440|ref|YP_004120488.1| hypothetical protein Daes_0725 [Desulfovibrio aespoeensis Aspo-2] gi|316942691|gb|ADU61742.1| protein of unknown function DUF140 [Desulfovibrio aespoeensis Aspo-2] Length = 268 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 72/253 (28%), Positives = 124/253 (49%), Gaps = 5/253 (1%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 LG + A + G +RQ+Y++GV V V+ LI TG V Sbjct: 16 GRMFGRVLDELGGMFLFFLSAVALMFAGWGQFSKTVRQIYFIGVQSVTVIALIGLFTGMV 75 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 + Q + LS FGA+ F +++ +RE+ +L A+M+ GR+GSA+ AEIG M+I+E+I Sbjct: 76 MGMQLYYALSVFGADGFLGTGVALSMVRELAPVLAAIMLTGRAGSAMTAEIGVMRISEQI 135 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ MG++ +R L++P++ A +IS P+L N A+ G + K V+++R Sbjct: 136 DALTIMGINPMRYLVAPKMAACLISFPILNAFFNLIALWGGWLTGVKLLGANEGVYWARV 195 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCVVQSISI 356 + ++I G IK+ A + + EG+ + + T VV+S I Sbjct: 196 QGSLDWSDIQGGFIKSMVFAVLVCTICCFEGYYTHTRSGHAGPEGVSQSTTNAVVKSCVI 255 Query: 357 VIIIDSLFAIFYF 369 ++ D + + Sbjct: 256 ILAADYVLTSLLW 268 >gi|319954485|ref|YP_004165752.1| hypothetical protein Celal_2978 [Cellulophaga algicola DSM 14237] gi|319423145|gb|ADV50254.1| protein of unknown function DUF140 [Cellulophaga algicola DSM 14237] Length = 258 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 65/250 (26%), Positives = 129/250 (51%), Gaps = 3/250 (1%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G + +G F + + +RQ Y +G + +V++ F+ G V+ Sbjct: 9 IKQALTEIGELTYFSGRFFREALRPPFEFNEFLRQCYQIGNRSLTLVLVTGFIIGLVLDL 68 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q + QFGA + +++ I +RE+G ++TA++ AGR S I AE+GSM++ E+IDA+ Sbjct: 69 QSRPTMIQFGAISWMPNMVGISIVRELGPVITALVCAGRISSGIGAELGSMRVTEQIDAM 128 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 G + + L+ R+ A I+ LPLL IL++ ++ G++++ ++ F ++F+ Sbjct: 129 EVSGTNPFKYLVVTRVMASILMLPLLVILSDAVSLFGSALIENIKGNVSFQLYFNTIFDA 188 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL- 363 + ++ +IK F AIG+V +G+ + +G T VV + ++ +ID + Sbjct: 189 LSYTDLIPAIIKTFFFGFAIGLVGCFKGYYCKKGTAGVGIAANTAVVMTSLLLFVIDFVA 248 Query: 364 --FAIFYFAI 371 + +F + Sbjct: 249 VFISNIFFDV 258 >gi|322515301|ref|ZP_08068298.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Actinobacillus ureae ATCC 25976] gi|322118677|gb|EFX90889.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Actinobacillus ureae ATCC 25976] Length = 258 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 70/239 (29%), Positives = 122/239 (51%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 G +F+ LI+Q+Y +GV + +++L G V+ QG L Sbjct: 19 FGRATFMLFGALIGKPQFRKHTPLLIKQLYVLGVQSLLIIMLSGLFIGMVLGLQGYVVLV 78 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 F AE L+S+ LRE+G ++TA++ AGR+GSA+ AEIG MK E++ ++ M +D Sbjct: 79 DFAAETSLGTLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDP 138 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 +R +I+PR WA +IS+P+L + I G S+V + + F+S ++ +++ Sbjct: 139 LRRIIAPRFWAGVISMPILAAIFTAIGIWGGSLVGVDWKGVDGGSFWSVMQNSVDWSDLI 198 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G IK+ A A+ +A+ G+ S + + T VV + +V+ +D + F Sbjct: 199 NGFIKSIIFAFAVVWIALFNGYDSVATSEGISQATTRTVVHASLVVLGLDFILTAIMFG 257 >gi|186477517|ref|YP_001858987.1| hypothetical protein Bphy_2769 [Burkholderia phymatum STM815] gi|184193976|gb|ACC71941.1| protein of unknown function DUF140 [Burkholderia phymatum STM815] Length = 255 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 60/262 (22%), Positives = 132/262 (50%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + A + ++ + +Q+++VG + Sbjct: 1 MISTIGRSVICGLGQTGYAARMFLRLVLEFFPLLRRP-------RLVTKQIHFVGNYSLV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D ++++++PR+WA II++P+L + + +IG IV Sbjct: 114 AEIGLMKAGEQLTAMEMMAVDPLKVVVAPRMWAGIIAMPVLAAIFSAVGVIGGYIVGVLM 173 Query: 290 YDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ ++ G+IK+ A+ +A+ +G+ + + T Sbjct: 174 IGVDAGAFWSQMQGGVDAYRDVGNGVIKSIVFGFAVTFIALYQGYEAKPTPEGVSRATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVYASLAVLGLDFLLTALMFS 255 >gi|28871581|ref|NP_794200.1| hypothetical protein PSPTO_4446 [Pseudomonas syringae pv. tomato str. DC3000] gi|28854833|gb|AAO57895.1| membrane protein, putative [Pseudomonas syringae pv. tomato str. DC3000] Length = 265 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 69/267 (25%), Positives = 138/267 (51%), Gaps = 8/267 (2%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 S + +G+ + + L + G +S L++Q+Y VG Sbjct: 4 KSLMDRVRLLGRSAIDIVAVLGRSGLFLVHALLGRGGAGSS-------FQLLVKQLYSVG 56 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V + ++++ G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+ Sbjct: 57 VMSLVIIVVSGMFIGMVLALQGFSILAKYGSEQAVGQMVALTLLRELGPVVTALLFAGRA 116 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA ISLP+L ++ + I GAS Sbjct: 117 GSALSAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFSVVGIWGASW 176 Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 V + + F+S ++ + ++ G+IK+ A + +A+ +G+ S + Sbjct: 177 VAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCDPTSEGIS 236 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370 + T VV + V+ +D + F Sbjct: 237 RATTKTVVYASLAVLGLDFILTALMFG 263 >gi|271498870|ref|YP_003331895.1| hypothetical protein Dd586_0293 [Dickeya dadantii Ech586] gi|270342425|gb|ACZ75190.1| protein of unknown function DUF140 [Dickeya dadantii Ech586] Length = 260 Score = 229 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 65/256 (25%), Positives = 120/256 (46%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + G + L +Q+Y VGV + ++++ Sbjct: 4 QALASLGRVGIQVCASFGRAGLMLFNALVGKPEPARQWPLLRKQLYSVGVQSLLIIMVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 VFIGMVLGLQGYLVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +++PR WA +IS+PLLT++ I G ++V + I Sbjct: 124 KATEQLSSMEMMAVDPLRRVVAPRFWAGVISMPLLTVIFVAVGIWGGALVGVDWKGIDSG 183 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + ++ +IK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQNAVEWQKDLLNCVIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|307153262|ref|YP_003888646.1| hypothetical protein Cyan7822_3422 [Cyanothece sp. PCC 7822] gi|306983490|gb|ADN15371.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7822] Length = 264 Score = 229 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 65/248 (26%), Positives = 119/248 (47%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + S L I G+ K+K + + QM VG + + ++ + G V Sbjct: 9 SGFSSWFARLSAAILLGGQVFFHLLKYKIHRRNTLDQMAIVGPESLTISLVTAAFVGMVF 68 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 Q + + FGA + ++S+ RE+ +LTAV++AGR GSA AEIG+M++ E+ID Sbjct: 69 TIQVSREFIYFGAGSYVGGVLSLALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQID 128 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ + D + L+ PR+ A + LP+LT+LA + I G + Y+I AVF + Sbjct: 129 ALHMLKTDPIDYLVIPRVLACSLMLPILTVLALLTGIAGGIAIADSLYNISPAVFLNSAR 188 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + ++ + ++K+ I ++ G + +G+ TT VV ++ + + + Sbjct: 189 NFLQTWDLVSCILKSAVFGSLIAVIGCSWGLTTSGGAKGVGQSTTTAVVTALLAIFVTNF 248 Query: 363 LFAIFYFA 370 + F Sbjct: 249 FLSWLMFQ 256 >gi|163797504|ref|ZP_02191455.1| hypothetical protein BAL199_23507 [alpha proteobacterium BAL199] gi|159177253|gb|EDP61812.1| hypothetical protein BAL199_23507 [alpha proteobacterium BAL199] Length = 282 Score = 229 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 59/253 (23%), Positives = 115/253 (45%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + S LG + G + + + RQ +G +PVV L + Sbjct: 29 LATIGSTFLSFLTALGRLALFAGSAVGHCVRPPIYPRLIGRQFLEIGYYSLPVVGLTTLF 88 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 +G V+A Q ++F AE ++ + RE+ +L +M+AGR G+A+ AEIG+M++ Sbjct: 89 SGMVLALQSYSGFARFSAESAVATVVVLSITRELAPVLAGLMVAGRVGAAMAAEIGTMRV 148 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+ T+ + + LI+PR+ A +SLP+L ++ + + G +V + Sbjct: 149 TEQIDALTTLSTNPFKYLIAPRLIAATLSLPILVLIGDVIGVFGGYVVGVYKLGFNAGNY 208 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 ++ +GL+KA + ++ G+ + +G T VV + ++ Sbjct: 209 IQSTVQFLEQIDVISGLVKAGVFGFIVALMGCYHGYHSRGGAQGVGAATTNAVVTASIMI 268 Query: 358 IIIDSLFAIFYFA 370 +I + +F Sbjct: 269 LIANYAITELFFG 281 >gi|82778508|ref|YP_404857.1| hypothetical protein SDY_3375 [Shigella dysenteriae Sd197] gi|170765889|ref|ZP_02900700.1| toluene ABC transporter, permease protein [Escherichia albertii TW07627] gi|81242656|gb|ABB63366.1| conserved hypothetical protein [Shigella dysenteriae Sd197] gi|170125035|gb|EDS93966.1| toluene ABC transporter, permease protein [Escherichia albertii TW07627] Length = 260 Score = 229 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 71/255 (27%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++++ Sbjct: 5 ALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGV 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLTI+ I G S+V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDSGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S + ++ LIK+ A + +++ G+ S + + T VV S Sbjct: 185 FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|33151499|ref|NP_872852.1| permease [Haemophilus ducreyi 35000HP] gi|33147719|gb|AAP95241.1| probable permease [Haemophilus ducreyi 35000HP] Length = 259 Score = 229 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 76/264 (28%), Positives = 130/264 (49%), Gaps = 7/264 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N H+G+ ++ + +L G +F LI+Q+Y +GV Sbjct: 2 VLNFINHLGEHCIQLVKTFGRATLMLW------GALIGKP-QFSKHTPLLIKQLYILGVQ 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++IL G V+A QG L F AE L+S+ LRE+G ++TA++ AGR+GS Sbjct: 55 SLLIIILSGLFIGMVLALQGYVVLVDFAAESSLGTLISLSLLRELGPVVTALLFAGRAGS 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEI MK E++ ++ M +D +R +I+PR WA +IS+P+L ++ I G S+V Sbjct: 115 ALTAEIALMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPILAVIFTAIGIWGGSLVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + + F+S + ++ G IK+ A A+ +A+ G+ S + + Sbjct: 175 VDWKGVDSGSFWSVMQHSVNGQDLINGFIKSIIFAIAVVWIALFNGYDSTATSEGISQAT 234 Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370 T VV + IV+ +D + F Sbjct: 235 TRTVVHASLIVLGLDFILTAMMFG 258 >gi|307129071|ref|YP_003881087.1| putative toluene transporter subunit: membrane protein [Dickeya dadantii 3937] gi|306526600|gb|ADM96530.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Dickeya dadantii 3937] Length = 260 Score = 229 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 65/256 (25%), Positives = 120/256 (46%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + G + L +Q+Y VGV + ++++ Sbjct: 4 QALASLGRVGIQVCAAFGRAGLMLFNALVGKPEPAKQWPLLRKQLYSVGVQSLLIIMVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 VFIGMVLGLQGYLVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +++PR WA +IS+PLLT++ I G ++V + I Sbjct: 124 KTTEQLSSMEMMAVDPLRRVVAPRFWAGVISMPLLTVIFVAVGIWGGALVGVDWKGIDSG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + ++ +IK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQNAVEWRKDLLNCVIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|148828248|ref|YP_001293001.1| ABC transporter permease [Haemophilus influenzae PittGG] gi|148719490|gb|ABR00618.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae PittGG] Length = 261 Score = 229 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 77/265 (29%), Positives = 135/265 (50%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N +GK+++ F +L G + + L++QM+ +GV Sbjct: 2 IVNFISTLGKQVIDFFRALGRAGFML------FGALIGKP-QIRKHFPLLVKQMHVLGVQ 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + +++L G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GS Sbjct: 55 SLLIILLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGS 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+P+L+IL I G S+V Sbjct: 115 ALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPILSILFIAIGIWGGSLVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + + F+S ++ + + +I G IKA F A A+ +A+ G+ S + + Sbjct: 175 VDWKGVDSGSFWSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYDCMPTSEGISQA 234 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + +V+ +D + F Sbjct: 235 TTRTVVHASLVVLGLDFILTAIMFG 259 >gi|91774594|ref|YP_544350.1| hypothetical protein Mfla_0238 [Methylobacillus flagellatus KT] gi|91708581|gb|ABE48509.1| protein of unknown function DUF140 [Methylobacillus flagellatus KT] Length = 263 Score = 229 bits (585), Expect = 5e-58, Method: Composition-based stats. Identities = 69/266 (25%), Positives = 136/266 (51%), Gaps = 8/266 (3%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 +++ N+ IG +++ + + V+ +GE L IR++Y+ Sbjct: 2 FSAVANMLRGIGHRVIDRLWRFGAGIRFFFYVLIYSGESFRR-------LHLTIREIYFT 54 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 GV + ++++ +F G V+A QG L ++G+ L+++ +RE+G ++TA++ AGR Sbjct: 55 GVLSLIIILVSAFFVGMVLALQGYNTLQRYGSSEAIGVLVALSLVRELGPVVTALLFAGR 114 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 +G+AI AEIG M+ E++ A+ M + + +++PR WA + S+PLL L + ++G Sbjct: 115 AGTAITAEIGLMRATEQLSAMEMMAVSPIARVVAPRFWAGLFSMPLLAALFSMVGVLGGY 174 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 +V + F+S+ ++ +I G+IK+ A ++A+ EGF + + Sbjct: 175 LVAVPLIGVDAGAFWSQMQASVDFREDIVNGVIKSLVFGIACTMIALFEGFDAPPTAEGV 234 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFY 368 + T VV S V+ +D + F Sbjct: 235 SRATTRTVVNSSLAVLGLDFIMTSFM 260 >gi|94264494|ref|ZP_01288281.1| Protein of unknown function DUF140 [delta proteobacterium MLMS-1] gi|94266598|ref|ZP_01290280.1| Protein of unknown function DUF140 [delta proteobacterium MLMS-1] gi|93452769|gb|EAT03307.1| Protein of unknown function DUF140 [delta proteobacterium MLMS-1] gi|93455053|gb|EAT05280.1| Protein of unknown function DUF140 [delta proteobacterium MLMS-1] Length = 263 Score = 229 bits (585), Expect = 5e-58, Method: Composition-based stats. Identities = 75/265 (28%), Positives = 130/265 (49%), Gaps = 13/265 (4%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170 +G++ + + D L + G ++F ++RQ +G + +PV Sbjct: 6 VERLGERSLYILGDLGRMGVFL---LLAVGGLFKRPFRF----AEVVRQTRLIGANSLPV 58 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 + + TG V+ QG + L QFGAE +++ +RE+G +LTA+M+ GR+GSA+ A Sbjct: 59 IFFTAAFTGMVLGLQGYYTLRQFGAESALGSAVALSLIRELGPVLTALMVIGRAGSAMCA 118 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 EIG M+ +E+IDA+ M +D R LI+P++ A +IS+PLLT++ N I G + Sbjct: 119 EIGIMRNSEQIDALECMAVDPFRYLIAPKLLATMISIPLLTLIFNVVGIFGGYVAGVMLL 178 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV------GVHSNSLGK 344 + +F+ + A+I G+IK+ A + + G+ V G + + + Sbjct: 179 GVNPGSYFAGMEQSVVDADIRMGIIKSLVFALLVVWICTARGYYVHAIRGAGFGAEGVSR 238 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYF 369 T VV S V++ D L Sbjct: 239 ATTQAVVFSSISVLLFDYLLTAVLL 263 >gi|292670497|ref|ZP_06603923.1| ABC superfamily ATP binding cassette transporter, permease protein [Selenomonas noxia ATCC 43541] gi|292647907|gb|EFF65879.1| ABC superfamily ATP binding cassette transporter, permease protein [Selenomonas noxia ATCC 43541] Length = 310 Score = 229 bits (585), Expect = 5e-58, Method: Composition-based stats. Identities = 75/306 (24%), Positives = 133/306 (43%), Gaps = 1/306 (0%) Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + + L + Q P Y + + + Sbjct: 6 QRRSSTDADAERPYRALLLPAAGYRPCSDEGRQLPAAVEAYIKTGGGGKTVQRILEAVGA 65 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 + +G V GE + + + S+I QM ++G + +V L TG V+ Sbjct: 66 FVLTHLANIGRVTLLYGETIRQVTR-RLRVRSIIYQMAHLGADSLLIVGLTLLFTGVVLT 124 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q A + ++GA+ +++I RE+G +L V+ AGR G+AI AE+ +MK+ E+IDA Sbjct: 125 LQIAHEFIRYGAQSTVGAVIAIGIGRELGPVLVGVVCAGRVGAAITAEVSTMKVTEQIDA 184 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R M + V LI PR+ A ++ +P+LT+ + ++G + Y I F + Sbjct: 185 LRVMAVSPVNYLIVPRMLACMVVVPILTVFGDVIGVLGGYLTAVYYSGISAYTFTNSITQ 244 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 A + ++ GLIKA F I ++ G + +GK VV SI ++ I++++ Sbjct: 245 FALIYDMTGGLIKAIFFGNVIAVLGCHYGLNAPSGAEGVGKATMHTVVTSIIVIFILNAV 304 Query: 364 FAIFYF 369 F F Sbjct: 305 LTFFLF 310 >gi|107024236|ref|YP_622563.1| hypothetical protein Bcen_2692 [Burkholderia cenocepacia AU 1054] gi|116688439|ref|YP_834062.1| hypothetical protein Bcen2424_0415 [Burkholderia cenocepacia HI2424] gi|206558708|ref|YP_002229468.1| hypothetical protein BCAL0302 [Burkholderia cenocepacia J2315] gi|105894425|gb|ABF77590.1| protein of unknown function DUF140 [Burkholderia cenocepacia AU 1054] gi|116646528|gb|ABK07169.1| protein of unknown function DUF140 [Burkholderia cenocepacia HI2424] gi|198034745|emb|CAR50612.1| putative membrane protein [Burkholderia cenocepacia J2315] Length = 255 Score = 229 bits (585), Expect = 5e-58, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + + ++ + +Q++++G Sbjct: 1 MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D ++ +I+PR+WA II++PLL + N ++G V Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKNVIAPRMWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + ++ G+IK+ A+ +A+ +G+ + + T Sbjct: 174 IGVDPGAFWSQMQGGVQVWADVGNGVIKSIVFGFAVTFIALYQGYEAKPTPEGVSRATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255 >gi|15803734|ref|NP_289768.1| hypothetical protein Z4557 [Escherichia coli O157:H7 EDL933] gi|15833327|ref|NP_312100.1| hypothetical protein ECs4073 [Escherichia coli O157:H7 str. Sakai] gi|16131084|ref|NP_417661.1| ABC transporter maintaining OM lipid asymmetry, inner membrane permease protein [Escherichia coli str. K-12 substr. MG1655] gi|24114483|ref|NP_708993.1| integral membrane protein [Shigella flexneri 2a str. 301] gi|26249780|ref|NP_755820.1| hypothetical protein c3954 [Escherichia coli CFT073] gi|30064532|ref|NP_838703.1| integral membrane protein [Shigella flexneri 2a str. 2457T] gi|82545568|ref|YP_409515.1| hypothetical protein SBO_3188 [Shigella boydii Sb227] gi|89109957|ref|AP_003737.1| predicted toluene transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|91212619|ref|YP_542605.1| hypothetical protein UTI89_C3630 [Escherichia coli UTI89] gi|110643434|ref|YP_671164.1| hypothetical protein ECP_3281 [Escherichia coli 536] gi|110807060|ref|YP_690580.1| integral membrane protein [Shigella flexneri 5 str. 8401] gi|117625486|ref|YP_858809.1| putative toluene transporter subunit: permease component [Escherichia coli APEC O1] gi|157156689|ref|YP_001464672.1| toluene ABC transporter, permease protein [Escherichia coli E24377A] gi|157162678|ref|YP_001459996.1| toluene ABC transporter, permease protein [Escherichia coli HS] gi|168751600|ref|ZP_02776622.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4113] gi|168754176|ref|ZP_02779183.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4401] gi|168763731|ref|ZP_02788738.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4501] gi|168769050|ref|ZP_02794057.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4486] gi|168777249|ref|ZP_02802256.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4196] gi|168781338|ref|ZP_02806345.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4076] gi|168786080|ref|ZP_02811087.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC869] gi|168800908|ref|ZP_02825915.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC508] gi|170018556|ref|YP_001723510.1| hypothetical protein EcolC_0506 [Escherichia coli ATCC 8739] gi|170082728|ref|YP_001732048.1| toluene ABC transporter membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|170684208|ref|YP_001745466.1| toluene ABC transporter permease [Escherichia coli SMS-3-5] gi|187733158|ref|YP_001881891.1| toluene ABC transporter permease [Shigella boydii CDC 3083-94] gi|188492313|ref|ZP_02999583.1| toluene ABC transporter, permease protein [Escherichia coli 53638] gi|191168635|ref|ZP_03030417.1| toluene ABC transporter, permease protein [Escherichia coli B7A] gi|191174475|ref|ZP_03035975.1| toluene ABC transporter, permease protein [Escherichia coli F11] gi|193070286|ref|ZP_03051229.1| toluene ABC transporter, permease protein [Escherichia coli E110019] gi|194429132|ref|ZP_03061662.1| toluene ABC transporter, permease protein [Escherichia coli B171] gi|194434508|ref|ZP_03066768.1| toluene ABC transporter, permease protein [Shigella dysenteriae 1012] gi|194439172|ref|ZP_03071253.1| toluene ABC transporter, permease protein [Escherichia coli 101-1] gi|195940050|ref|ZP_03085432.1| toluene ABC transporter membrane protein [Escherichia coli O157:H7 str. EC4024] gi|208805807|ref|ZP_03248144.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4206] gi|208814152|ref|ZP_03255481.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4045] gi|208818401|ref|ZP_03258721.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4042] gi|209399676|ref|YP_002272664.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4115] gi|209920669|ref|YP_002294753.1| putative ABC transporter permease [Escherichia coli SE11] gi|215488510|ref|YP_002330941.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|217327544|ref|ZP_03443627.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. TW14588] gi|218555764|ref|YP_002388677.1| toluene ABC transporter membrane protein [Escherichia coli IAI1] gi|218560264|ref|YP_002393177.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli S88] gi|218691484|ref|YP_002399696.1| toluene ABC transporter membrane protein [Escherichia coli ED1a] gi|218696899|ref|YP_002404566.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli 55989] gi|218701963|ref|YP_002409592.1| toluene ABC transporter membrane protein [Escherichia coli IAI39] gi|218706814|ref|YP_002414333.1| toluene ABC transporter membrane protein [Escherichia coli UMN026] gi|227887915|ref|ZP_04005720.1| ABC superfamily ATP binding cassette transporter, membrane protein [Escherichia coli 83972] gi|237706054|ref|ZP_04536535.1| integral membrane protein [Escherichia sp. 3_2_53FAA] gi|238902296|ref|YP_002928092.1| putative toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli BW2952] gi|253771972|ref|YP_003034803.1| hypothetical protein ECBD_0548 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254038359|ref|ZP_04872417.1| toluene ABC transporter membrane protein [Escherichia sp. 1_1_43] gi|254163136|ref|YP_003046244.1| putative toluene transporter subunit membrane component of ABC superfamily [Escherichia coli B str. REL606] gi|254795143|ref|YP_003079980.1| putative toluene ABC transporter membrane protein [Escherichia coli O157:H7 str. TW14359] gi|256018887|ref|ZP_05432752.1| predicted toluene transporter subunit: membrane component of ABC superfamily protein [Shigella sp. D9] gi|256024231|ref|ZP_05438096.1| predicted toluene transporter subunit: membrane component of ABC superfamily protein [Escherichia sp. 4_1_40B] gi|260846007|ref|YP_003223785.1| putative toluene transporter subunit [Escherichia coli O103:H2 str. 12009] gi|260857321|ref|YP_003231212.1| putative toluene transporter subunit [Escherichia coli O26:H11 str. 11368] gi|260869945|ref|YP_003236347.1| putative toluene transporter subunit [Escherichia coli O111:H- str. 11128] gi|261228205|ref|ZP_05942486.1| predicted toluene transporter subunit: membrane component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK2000] gi|261255061|ref|ZP_05947594.1| putative toluene transporter subunit [Escherichia coli O157:H7 str. FRIK966] gi|291284568|ref|YP_003501386.1| hypothetical protein G2583_3919 [Escherichia coli O55:H7 str. CB9615] gi|293406803|ref|ZP_06650729.1| ABC transporter [Escherichia coli FVEC1412] gi|293412565|ref|ZP_06655288.1| conserved hypothetical protein [Escherichia coli B354] gi|293416623|ref|ZP_06659262.1| inner membrane protein yrbE [Escherichia coli B185] gi|293449527|ref|ZP_06663948.1| UPF0393 inner membrane protein yrbE [Escherichia coli B088] gi|298382544|ref|ZP_06992141.1| ABC transport system permease [Escherichia coli FVEC1302] gi|300817551|ref|ZP_07097767.1| toluene tolerance protein Ttg2B [Escherichia coli MS 107-1] gi|300823840|ref|ZP_07103964.1| toluene tolerance protein Ttg2B [Escherichia coli MS 119-7] gi|300897962|ref|ZP_07116338.1| toluene tolerance protein Ttg2B [Escherichia coli MS 198-1] gi|300904386|ref|ZP_07122234.1| toluene tolerance protein Ttg2B [Escherichia coli MS 84-1] gi|300918956|ref|ZP_07135511.1| toluene tolerance protein Ttg2B [Escherichia coli MS 115-1] gi|300926061|ref|ZP_07141883.1| toluene tolerance protein Ttg2B [Escherichia coli MS 182-1] gi|300929890|ref|ZP_07145332.1| toluene tolerance protein Ttg2B [Escherichia coli MS 187-1] gi|300938110|ref|ZP_07152884.1| toluene tolerance protein Ttg2B [Escherichia coli MS 21-1] gi|300948849|ref|ZP_07162914.1| toluene tolerance protein Ttg2B [Escherichia coli MS 116-1] gi|300955783|ref|ZP_07168125.1| toluene tolerance protein Ttg2B [Escherichia coli MS 175-1] gi|300979957|ref|ZP_07174809.1| toluene tolerance protein Ttg2B [Escherichia coli MS 200-1] gi|300990924|ref|ZP_07179376.1| toluene tolerance protein Ttg2B [Escherichia coli MS 45-1] gi|301022096|ref|ZP_07186022.1| toluene tolerance protein Ttg2B [Escherichia coli MS 69-1] gi|301025904|ref|ZP_07189391.1| toluene tolerance protein Ttg2B [Escherichia coli MS 196-1] gi|301047959|ref|ZP_07195004.1| toluene tolerance protein Ttg2B [Escherichia coli MS 185-1] gi|301306740|ref|ZP_07212794.1| toluene tolerance protein Ttg2B [Escherichia coli MS 124-1] gi|301326373|ref|ZP_07219737.1| toluene tolerance protein Ttg2B [Escherichia coli MS 78-1] gi|301644908|ref|ZP_07244877.1| toluene tolerance protein Ttg2B [Escherichia coli MS 146-1] gi|306816464|ref|ZP_07450596.1| toluene ABC transporter, permease protein [Escherichia coli NC101] gi|307139880|ref|ZP_07499236.1| toluene ABC transporter, permease protein [Escherichia coli H736] gi|307313101|ref|ZP_07592727.1| protein of unknown function DUF140 [Escherichia coli W] gi|309793773|ref|ZP_07688199.1| toluene tolerance protein Ttg2B [Escherichia coli MS 145-7] gi|312968467|ref|ZP_07782676.1| toluene tolerance protein Ttg2B [Escherichia coli 2362-75] gi|312972532|ref|ZP_07786706.1| toluene tolerance protein Ttg2B [Escherichia coli 1827-70] gi|331643892|ref|ZP_08345023.1| putative ABC superfamily (membrane) transport protein [Escherichia coli H736] gi|331648994|ref|ZP_08350082.1| putative ABC superfamily (membrane) transport protein [Escherichia coli M605] gi|331654798|ref|ZP_08355798.1| putative ABC superfamily (membrane) transport protein [Escherichia coli M718] gi|331659481|ref|ZP_08360423.1| putative ABC superfamily (membrane) transport protein [Escherichia coli TA206] gi|331664807|ref|ZP_08365712.1| putative ABC superfamily (membrane) transport protein [Escherichia coli TA143] gi|331670021|ref|ZP_08370866.1| putative ABC superfamily (membrane) transport protein [Escherichia coli TA271] gi|331674724|ref|ZP_08375483.1| putative ABC superfamily (membrane) transport protein [Escherichia coli TA280] gi|331679273|ref|ZP_08379945.1| putative ABC superfamily (membrane) transport protein [Escherichia coli H591] gi|331684841|ref|ZP_08385433.1| putative ABC superfamily (membrane) transport protein [Escherichia coli H299] gi|54040598|sp|P64607|MLAE_ECOL6 RecName: Full=Probable phospholipid ABC transporter permease protein mlaE gi|54040599|sp|P64608|MLAE_ECO57 RecName: Full=Probable phospholipid ABC transporter permease protein mlaE gi|54040600|sp|P64609|MLAE_SHIFL RecName: Full=Probable phospholipid ABC transporter permease protein mlaE gi|54042861|sp|P64606|MLAE_ECOLI RecName: Full=Probable phospholipid ABC transporter permease protein mlaE gi|12517809|gb|AAG58328.1|AE005547_14 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] gi|26110208|gb|AAN82394.1|AE016767_154 Hypothetical protein yrbE [Escherichia coli CFT073] gi|606132|gb|AAA57995.1| ORF_f260 [Escherichia coli str. K-12 substr. MG1655] gi|1789585|gb|AAC76226.1| ABC transporter maintaining OM lipid asymmetry, inner membrane permease protein [Escherichia coli str. K-12 substr. MG1655] gi|13363546|dbj|BAB37496.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|24053666|gb|AAN44700.1| integral membrane protein [Shigella flexneri 2a str. 301] gi|30042791|gb|AAP18514.1| integral membrane protein [Shigella flexneri 2a str. 2457T] gi|81246979|gb|ABB67687.1| conserved hypothetical protein [Shigella boydii Sb227] gi|85675988|dbj|BAE77238.1| predicted toluene transporter subunit [Escherichia coli str. K12 substr. W3110] gi|91074193|gb|ABE09074.1| hypothetical protein UTI89_C3630 [Escherichia coli UTI89] gi|110345026|gb|ABG71263.1| putative membrane protein [Escherichia coli 536] gi|110616608|gb|ABF05275.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] gi|115514610|gb|ABJ02685.1| putative toluene transporter subunit: permease component [Escherichia coli APEC O1] gi|157068358|gb|ABV07613.1| toluene ABC transporter, permease protein [Escherichia coli HS] gi|157078719|gb|ABV18427.1| toluene ABC transporter, permease protein [Escherichia coli E24377A] gi|169753484|gb|ACA76183.1| protein of unknown function DUF140 [Escherichia coli ATCC 8739] gi|169890563|gb|ACB04270.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|170521926|gb|ACB20104.1| toluene ABC transporter, permease protein [Escherichia coli SMS-3-5] gi|187430150|gb|ACD09424.1| toluene ABC transporter, permease protein [Shigella boydii CDC 3083-94] gi|187767468|gb|EDU31312.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4196] gi|188014389|gb|EDU52511.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4113] gi|188487512|gb|EDU62615.1| toluene ABC transporter, permease protein [Escherichia coli 53638] gi|189001139|gb|EDU70125.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4076] gi|189358631|gb|EDU77050.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4401] gi|189361791|gb|EDU80210.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4486] gi|189366134|gb|EDU84550.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4501] gi|189373916|gb|EDU92332.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC869] gi|189376865|gb|EDU95281.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC508] gi|190901329|gb|EDV61096.1| toluene ABC transporter, permease protein [Escherichia coli B7A] gi|190905230|gb|EDV64869.1| toluene ABC transporter, permease protein [Escherichia coli F11] gi|192956345|gb|EDV86805.1| toluene ABC transporter, permease protein [Escherichia coli E110019] gi|194412857|gb|EDX29149.1| toluene ABC transporter, permease protein [Escherichia coli B171] gi|194417287|gb|EDX33396.1| toluene ABC transporter, permease protein [Shigella dysenteriae 1012] gi|194421868|gb|EDX37874.1| toluene ABC transporter, permease protein [Escherichia coli 101-1] gi|208725608|gb|EDZ75209.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4206] gi|208735429|gb|EDZ84116.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4045] gi|208738524|gb|EDZ86206.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4042] gi|209161076|gb|ACI38509.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4115] gi|209758098|gb|ACI77361.1| hypothetical protein ECs4073 [Escherichia coli] gi|209758100|gb|ACI77362.1| hypothetical protein ECs4073 [Escherichia coli] gi|209758102|gb|ACI77363.1| hypothetical protein ECs4073 [Escherichia coli] gi|209758104|gb|ACI77364.1| hypothetical protein ECs4073 [Escherichia coli] gi|209758106|gb|ACI77365.1| hypothetical protein ECs4073 [Escherichia coli] gi|209913928|dbj|BAG79002.1| putative ABC transporter permease component [Escherichia coli SE11] gi|215266582|emb|CAS11021.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|217319911|gb|EEC28336.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. TW14588] gi|218353631|emb|CAU99839.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli 55989] gi|218362532|emb|CAR00156.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli IAI1] gi|218367033|emb|CAR04804.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli S88] gi|218371949|emb|CAR19805.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli IAI39] gi|218429048|emb|CAR09855.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli ED1a] gi|218433911|emb|CAR14828.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli UMN026] gi|222034911|emb|CAP77654.1| UPF0393 inner membrane protein yrbE [Escherichia coli LF82] gi|226839983|gb|EEH72004.1| toluene ABC transporter membrane protein [Escherichia sp. 1_1_43] gi|226899094|gb|EEH85353.1| integral membrane protein [Escherichia sp. 3_2_53FAA] gi|227835311|gb|EEJ45777.1| ABC superfamily ATP binding cassette transporter, membrane protein [Escherichia coli 83972] gi|238863136|gb|ACR65134.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli BW2952] gi|242378737|emb|CAQ33527.1| MlaE, subunit of phospholipid ABC transporter [Escherichia coli BL21(DE3)] gi|253323016|gb|ACT27618.1| protein of unknown function DUF140 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975037|gb|ACT40708.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli B str. REL606] gi|253979193|gb|ACT44863.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli BL21(DE3)] gi|254594543|gb|ACT73904.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|257755970|dbj|BAI27472.1| predicted toluene transporter subunit [Escherichia coli O26:H11 str. 11368] gi|257761154|dbj|BAI32651.1| predicted toluene transporter subunit [Escherichia coli O103:H2 str. 12009] gi|257766301|dbj|BAI37796.1| predicted toluene transporter subunit [Escherichia coli O111:H- str. 11128] gi|260447779|gb|ACX38201.1| protein of unknown function DUF140 [Escherichia coli DH1] gi|281180236|dbj|BAI56566.1| putative ABC transporter permease component [Escherichia coli SE15] gi|281602577|gb|ADA75561.1| inner membrane protein yrbE [Shigella flexneri 2002017] gi|284923216|emb|CBG36310.1| putative organic solvent tolerance protein [Escherichia coli 042] gi|290764441|gb|ADD58402.1| UPF0393 inner membrane protein yrbE [Escherichia coli O55:H7 str. CB9615] gi|291322617|gb|EFE62046.1| UPF0393 inner membrane protein yrbE [Escherichia coli B088] gi|291426809|gb|EFE99841.1| ABC transporter [Escherichia coli FVEC1412] gi|291431979|gb|EFF04962.1| inner membrane protein yrbE [Escherichia coli B185] gi|291469336|gb|EFF11827.1| conserved hypothetical protein [Escherichia coli B354] gi|294493221|gb|ADE91977.1| putative ABC transporter, permease protein [Escherichia coli IHE3034] gi|298277684|gb|EFI19200.1| ABC transport system permease [Escherichia coli FVEC1302] gi|299879926|gb|EFI88137.1| toluene tolerance protein Ttg2B [Escherichia coli MS 196-1] gi|300300191|gb|EFJ56576.1| toluene tolerance protein Ttg2B [Escherichia coli MS 185-1] gi|300307892|gb|EFJ62412.1| toluene tolerance protein Ttg2B [Escherichia coli MS 200-1] gi|300317329|gb|EFJ67113.1| toluene tolerance protein Ttg2B [Escherichia coli MS 175-1] gi|300358310|gb|EFJ74180.1| toluene tolerance protein Ttg2B [Escherichia coli MS 198-1] gi|300397692|gb|EFJ81230.1| toluene tolerance protein Ttg2B [Escherichia coli MS 69-1] gi|300403660|gb|EFJ87198.1| toluene tolerance protein Ttg2B [Escherichia coli MS 84-1] gi|300407000|gb|EFJ90538.1| toluene tolerance protein Ttg2B [Escherichia coli MS 45-1] gi|300413898|gb|EFJ97208.1| toluene tolerance protein Ttg2B [Escherichia coli MS 115-1] gi|300417919|gb|EFK01230.1| toluene tolerance protein Ttg2B [Escherichia coli MS 182-1] gi|300451654|gb|EFK15274.1| toluene tolerance protein Ttg2B [Escherichia coli MS 116-1] gi|300456873|gb|EFK20366.1| toluene tolerance protein Ttg2B [Escherichia coli MS 21-1] gi|300462176|gb|EFK25669.1| toluene tolerance protein Ttg2B [Escherichia coli MS 187-1] gi|300523608|gb|EFK44677.1| toluene tolerance protein Ttg2B [Escherichia coli MS 119-7] gi|300529849|gb|EFK50911.1| toluene tolerance protein Ttg2B [Escherichia coli MS 107-1] gi|300838019|gb|EFK65779.1| toluene tolerance protein Ttg2B [Escherichia coli MS 124-1] gi|300846937|gb|EFK74697.1| toluene tolerance protein Ttg2B [Escherichia coli MS 78-1] gi|301076759|gb|EFK91565.1| toluene tolerance protein Ttg2B [Escherichia coli MS 146-1] gi|305850029|gb|EFM50488.1| toluene ABC transporter, permease protein [Escherichia coli NC101] gi|306907012|gb|EFN37520.1| protein of unknown function DUF140 [Escherichia coli W] gi|307555287|gb|ADN48062.1| toluene ABC transporter [Escherichia coli ABU 83972] gi|307625207|gb|ADN69511.1| toluene ABC transporter, permease protein [Escherichia coli UM146] gi|308122730|gb|EFO59992.1| toluene tolerance protein Ttg2B [Escherichia coli MS 145-7] gi|309703620|emb|CBJ02960.1| putative organic solvent tolerance protein [Escherichia coli ETEC H10407] gi|310334909|gb|EFQ01114.1| toluene tolerance protein Ttg2B [Escherichia coli 1827-70] gi|312286685|gb|EFR14596.1| toluene tolerance protein Ttg2B [Escherichia coli 2362-75] gi|312947751|gb|ADR28578.1| putative toluene transporter subunit [Escherichia coli O83:H1 str. NRG 857C] gi|313648563|gb|EFS13005.1| toluene tolerance protein Ttg2B [Shigella flexneri 2a str. 2457T] gi|315062500|gb|ADT76827.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli W] gi|315137780|dbj|BAJ44939.1| hypothetical protein ECDH1ME8569_3083 [Escherichia coli DH1] gi|315257122|gb|EFU37090.1| toluene tolerance protein Ttg2B [Escherichia coli MS 85-1] gi|315289007|gb|EFU48405.1| toluene tolerance protein Ttg2B [Escherichia coli MS 110-3] gi|315294854|gb|EFU54193.1| toluene tolerance protein Ttg2B [Escherichia coli MS 153-1] gi|315297940|gb|EFU57210.1| toluene tolerance protein Ttg2B [Escherichia coli MS 16-3] gi|315617277|gb|EFU97886.1| toluene tolerance protein Ttg2B [Escherichia coli 3431] gi|320181469|gb|EFW56387.1| Uncharacterized ABC transporter, permease component YrbE [Shigella boydii ATCC 9905] gi|320186681|gb|EFW61405.1| Uncharacterized ABC transporter, permease component YrbE [Shigella flexneri CDC 796-83] gi|320189547|gb|EFW64206.1| Uncharacterized ABC transporter, permease component YrbE [Escherichia coli O157:H7 str. EC1212] gi|320194679|gb|EFW69309.1| Uncharacterized ABC transporter, permease component YrbE [Escherichia coli WV_060327] gi|320202108|gb|EFW76683.1| Uncharacterized ABC transporter, permease component YrbE [Escherichia coli EC4100B] gi|320645562|gb|EFX14571.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli O157:H- str. 493-89] gi|320650872|gb|EFX19329.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli O157:H- str. H 2687] gi|320656253|gb|EFX24165.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661943|gb|EFX29351.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli O55:H7 str. USDA 5905] gi|320666778|gb|EFX33757.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli O157:H7 str. LSU-61] gi|323154409|gb|EFZ40610.1| toluene tolerance protein Ttg2B [Escherichia coli EPECa14] gi|323162886|gb|EFZ48721.1| toluene tolerance protein Ttg2B [Escherichia coli E128010] gi|323165155|gb|EFZ50945.1| toluene tolerance protein Ttg2B [Shigella sonnei 53G] gi|323173546|gb|EFZ59175.1| toluene tolerance protein Ttg2B [Escherichia coli LT-68] gi|323178630|gb|EFZ64206.1| toluene tolerance protein Ttg2B [Escherichia coli 1180] gi|323183148|gb|EFZ68546.1| toluene tolerance protein Ttg2B [Escherichia coli 1357] gi|323189185|gb|EFZ74469.1| toluene tolerance protein Ttg2B [Escherichia coli RN587/1] gi|323376912|gb|ADX49180.1| protein of unknown function DUF140 [Escherichia coli KO11] gi|323936112|gb|EGB32406.1| inner membrane protein yrbE [Escherichia coli E1520] gi|323941706|gb|EGB37885.1| inner membrane protein yrbE [Escherichia coli E482] gi|323946952|gb|EGB42968.1| inner membrane protein yrbE [Escherichia coli H120] gi|323951287|gb|EGB47162.1| inner membrane protein yrbE [Escherichia coli H252] gi|323957659|gb|EGB53373.1| inner membrane protein yrbE [Escherichia coli H263] gi|323961151|gb|EGB56765.1| inner membrane protein yrbE [Escherichia coli H489] gi|323966374|gb|EGB61808.1| inner membrane protein yrbE [Escherichia coli M863] gi|323970243|gb|EGB65514.1| inner membrane protein yrbE [Escherichia coli TA007] gi|323979089|gb|EGB74167.1| inner membrane protein yrbE [Escherichia coli TW10509] gi|324008706|gb|EGB77925.1| toluene tolerance protein Ttg2B [Escherichia coli MS 57-2] gi|324012162|gb|EGB81381.1| toluene tolerance protein Ttg2B [Escherichia coli MS 60-1] gi|324018354|gb|EGB87573.1| toluene tolerance protein Ttg2B [Escherichia coli MS 117-3] gi|324119559|gb|EGC13441.1| inner membrane protein yrbE [Escherichia coli E1167] gi|326337894|gb|EGD61728.1| Uncharacterized ABC transporter, permease component YrbE [Escherichia coli O157:H7 str. 1125] gi|326347464|gb|EGD71189.1| Uncharacterized ABC transporter, permease component YrbE [Escherichia coli O157:H7 str. 1044] gi|327251285|gb|EGE62974.1| toluene tolerance protein Ttg2B [Escherichia coli STEC_7v] gi|330909246|gb|EGH37760.1| uncharacterized ABC transporter, permease component YrbE [Escherichia coli AA86] gi|331037363|gb|EGI09587.1| putative ABC superfamily (membrane) transport protein [Escherichia coli H736] gi|331042741|gb|EGI14883.1| putative ABC superfamily (membrane) transport protein [Escherichia coli M605] gi|331048180|gb|EGI20257.1| putative ABC superfamily (membrane) transport protein [Escherichia coli M718] gi|331054063|gb|EGI26092.1| putative ABC superfamily (membrane) transport protein [Escherichia coli TA206] gi|331058055|gb|EGI30037.1| putative ABC superfamily (membrane) transport protein [Escherichia coli TA143] gi|331062934|gb|EGI34848.1| putative ABC superfamily (membrane) transport protein [Escherichia coli TA271] gi|331068163|gb|EGI39559.1| putative ABC superfamily (membrane) transport protein [Escherichia coli TA280] gi|331073338|gb|EGI44661.1| putative ABC superfamily (membrane) transport protein [Escherichia coli H591] gi|331078456|gb|EGI49662.1| putative ABC superfamily (membrane) transport protein [Escherichia coli H299] gi|332086231|gb|EGI91389.1| toluene tolerance protein Ttg2B [Shigella boydii 5216-82] gi|332086452|gb|EGI91599.1| toluene tolerance protein Ttg2B [Shigella dysenteriae 155-74] gi|332090701|gb|EGI95795.1| toluene tolerance protein Ttg2B [Shigella boydii 3594-74] gi|332102327|gb|EGJ05673.1| membrane component of ABC superfamily [Shigella sp. D9] Length = 260 Score = 229 bits (585), Expect = 5e-58, Method: Composition-based stats. Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++++ Sbjct: 5 ALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGV 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLT++ I G S+V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGIWGGSLVGVSWKGIDSGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S + ++ LIK+ A + +++ G+ S + + T VV S Sbjct: 185 FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|288817534|ref|YP_003431881.1| ABC transporter permease protein [Hydrogenobacter thermophilus TK-6] gi|288786933|dbj|BAI68680.1| ABC transporter permease protein [Hydrogenobacter thermophilus TK-6] gi|308751137|gb|ADO44620.1| protein of unknown function DUF140 [Hydrogenobacter thermophilus TK-6] Length = 245 Score = 229 bits (585), Expect = 5e-58, Method: Composition-based stats. Identities = 76/237 (32%), Positives = 125/237 (52%), Gaps = 2/237 (0%) Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G++++ G + K L I Q+ Y+G VPVV++ S +G VIA Q + Sbjct: 11 GVILTLMGIYFMFVNPPK--LRHFISQLAYLGAETVPVVVITSIFSGGVIALQTYSTFHR 68 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 F AE +++I RE+G +L ++M+ R GSA+ A IG+M+I E+IDA+ MG++ V Sbjct: 69 FNAEFLIGAVVAISMGRELGPVLASLMVVARVGSAMTASIGTMRITEQIDALEVMGINPV 128 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 L+SPR++A ++ +P+L ILA+ + + G V K + + +F+ + A + Sbjct: 129 SYLVSPRVFAGVLGVPMLVILADIAGVFGGWFVAVKLFGVNEYLFWEKMRDIAEFYDFIG 188 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 GL KA F I V+ GF G + +G+ T VV S +++I D F Sbjct: 189 GLYKAVFFGLIISAVSCYFGFYTGGGTEGVGRATTNSVVVSSMLILISDYFLTAIIF 245 >gi|186684391|ref|YP_001867587.1| hypothetical protein Npun_R4269 [Nostoc punctiforme PCC 73102] gi|186466843|gb|ACC82644.1| protein of unknown function DUF140 [Nostoc punctiforme PCC 73102] Length = 265 Score = 229 bits (585), Expect = 5e-58, Method: Composition-based stats. Identities = 67/239 (28%), Positives = 117/239 (48%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 L I G+ + K + + QM VG + + +L + GAV Q A + Sbjct: 17 LLAAIFLGGQVLVHLLRGKIHRRNTLEQMAAVGPDSLFIALLTAIFVGAVFTIQVAREFI 76 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 FGA ++SI RE+ +LTAV++AGR GSA AEIG+M++ E+IDA+ + D Sbjct: 77 NFGAGNIIGGVLSIALTRELSPVLTAVVLAGRVGSAFAAEIGTMRVTEQIDAMLMLKTDP 136 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 + L+ PR+ A + LP+LT+L+ + + G I+ Y++ VF + + +I Sbjct: 137 IDYLVIPRVIACCLMLPILTLLSLITGMFGGFIIATNVYNLSDTVFLDSARNFLGIWDII 196 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + ++KA I ++ G + +G+ TT VV ++ I+ + + + F Sbjct: 197 SAMLKAFCFGILIAVIGCSWGLTTTGGAKGVGQSTTTAVVTALLIIFVSNFFLSWLMFQ 255 >gi|300113019|ref|YP_003759594.1| hypothetical protein Nwat_0303 [Nitrosococcus watsonii C-113] gi|299538956|gb|ADJ27273.1| protein of unknown function DUF140 [Nitrosococcus watsonii C-113] Length = 260 Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + +++ LG G+ S LI Q+Y VGV +P++++ Sbjct: 3 EALLRLGRWGLGTFERLGRGHLFLGQLLLSIAALLLRFPLLITQVYSVGVLTLPIIVVSG 62 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L FGAE ++S+ +RE+G +++A++ AGR+GSA+ AEIG M Sbjct: 63 AFVGMVLGLQGYNTLVDFGAEESLGVIVSLSLVRELGPVVSALLFAGRAGSALTAEIGLM 122 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ + M +D VR + +PR +A S+PLL + + ++G V + Sbjct: 123 KATEQLSGMEMMAVDPVRRIAAPRFFAGCFSMPLLAAIFSAVGVLGGYFVGVGLLGVDEG 182 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S+ ++ ++ G+IK+ + +A+ EG+ S+ +G+ T VV S Sbjct: 183 AFWSQMQASTDWEEDVLNGVIKSIVFGIVVTWIAVFEGYDTVPTSDGVGRATTRTVVHSA 242 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 243 FAVLALDFVLTALMFG 258 >gi|320640265|gb|EFX09837.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli O157:H7 str. G5101] Length = 260 Score = 229 bits (584), Expect = 6e-58, Method: Composition-based stats. Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++++ Sbjct: 5 ALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGV 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLT++ I G S+V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFAAVGIWGGSLVGVSWKGIDSGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S + ++ LIK+ A + +++ G+ S + + T VV S Sbjct: 185 FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|319897434|ref|YP_004135631.1| abc-type transport system protein, permease component [Haemophilus influenzae F3031] gi|317432940|emb|CBY81307.1| conserved ABC-type transport system protein,permease component [Haemophilus influenzae F3031] Length = 261 Score = 229 bits (584), Expect = 6e-58, Method: Composition-based stats. Identities = 78/267 (29%), Positives = 135/267 (50%), Gaps = 8/267 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N +GK+ + F +L G + + L++QM+ +GV Sbjct: 2 IVNFISALGKQAIDFFRALGRAGFML------FGALIGKP-QIRKHFPLLVKQMHVLGVQ 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + +++L G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GS Sbjct: 55 SLLIILLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGS 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+P+L+IL I G S+V Sbjct: 115 ALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPVLSILFIAIGIWGGSLVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + + F+S ++ + + +I G IKA F A A+ +A+ G+ S + + Sbjct: 175 VDWKGVDSGSFWSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYDCMPTSEGISQA 234 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAIG 372 T VV + +V+ +D + F G Sbjct: 235 TTRTVVHASLVVLGLDFILTAIMFGAG 261 >gi|145627949|ref|ZP_01783750.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae 22.1-21] gi|145632451|ref|ZP_01788186.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae 3655] gi|145634244|ref|ZP_01789955.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae PittAA] gi|145636462|ref|ZP_01792130.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae PittHH] gi|145638100|ref|ZP_01793710.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae PittII] gi|148826300|ref|YP_001291053.1| ABC transporter permease [Haemophilus influenzae PittEE] gi|229843875|ref|ZP_04464016.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae 6P18H1] gi|229846118|ref|ZP_04466230.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae 7P49H1] gi|144979724|gb|EDJ89383.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae 22.1-21] gi|144987358|gb|EDJ93888.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae 3655] gi|145268688|gb|EDK08681.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae PittAA] gi|145270287|gb|EDK10222.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae PittHH] gi|145272429|gb|EDK12336.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae PittII] gi|148716460|gb|ABQ98670.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae PittEE] gi|229811122|gb|EEP46839.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae 7P49H1] gi|229812869|gb|EEP48557.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae 6P18H1] gi|301169827|emb|CBW29431.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Haemophilus influenzae 10810] gi|309751266|gb|ADO81250.1| Phospholipid ABC transporter, permease component [Haemophilus influenzae R2866] Length = 261 Score = 229 bits (584), Expect = 6e-58, Method: Composition-based stats. Identities = 77/265 (29%), Positives = 135/265 (50%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N +GK+++ F +L G + + L++QM+ +GV Sbjct: 2 IVNFISALGKQVIDFFRALGRAGFML------FGALIGKP-QIRKHFPLLVKQMHVLGVQ 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + +++L G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GS Sbjct: 55 SLLIILLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGS 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+P+L+IL I G S+V Sbjct: 115 ALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPILSILFIAIGIWGGSLVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + + F+S ++ + + +I G IKA F A A+ +A+ G+ S + + Sbjct: 175 VDWKGVDSGSFWSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYDCMPTSEGISQA 234 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + +V+ +D + F Sbjct: 235 TTRTVVHASLVVLGLDFILTAIMFG 259 >gi|77166237|ref|YP_344762.1| hypothetical protein Noc_2785 [Nitrosococcus oceani ATCC 19707] gi|254435217|ref|ZP_05048724.1| conserved hypothetical protein [Nitrosococcus oceani AFC27] gi|76884551|gb|ABA59232.1| Protein of unknown function DUF140 [Nitrosococcus oceani ATCC 19707] gi|207088328|gb|EDZ65600.1| conserved hypothetical protein [Nitrosococcus oceani AFC27] Length = 260 Score = 229 bits (584), Expect = 6e-58, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + +++ LG G+ S LI Q+Y VGV +P++++ Sbjct: 3 EALLRLGRWGLGTFERLGRGHLFLGQLLLSIATLLLRFPLLITQVYSVGVLTLPIIVVSG 62 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L FGAE ++S+ +RE+G +++A++ AGR+GSA+ AEIG M Sbjct: 63 AFVGMVLGLQGYNTLVDFGAEESLGVIVSLSLVRELGPVVSALLFAGRAGSALTAEIGLM 122 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ + M +D VR + +PR +A S+PLL + + ++G V + Sbjct: 123 KATEQLSGMEMMAVDPVRRIAAPRFFAGCFSMPLLAAIFSAVGVLGGYFVGVGLLGVDEG 182 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S+ ++ ++ G+IK+ + +A+ EG+ S+ +G+ T VV S Sbjct: 183 AFWSQMQASTDWKEDVLNGVIKSIVFGIVVTWIAVFEGYDAVPTSDGVGRATTRTVVHSA 242 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 243 FAVLALDFVLTALMFG 258 >gi|17231507|ref|NP_488055.1| hypothetical protein alr4015 [Nostoc sp. PCC 7120] gi|17133150|dbj|BAB75714.1| alr4015 [Nostoc sp. PCC 7120] Length = 263 Score = 229 bits (584), Expect = 6e-58, Method: Composition-based stats. Identities = 70/255 (27%), Positives = 120/255 (47%), Gaps = 6/255 (2%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K + + A LG G+ + K + QM VG + + +L + Sbjct: 5 KSSIGTWSQRLLAAIFLG------GQAIVHLLRGKIHWRNTKEQMAAVGPDSLFIALLTA 58 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 GAV Q A + FGA ++++ RE+ +LTAV++AGR GSA AEIG+M Sbjct: 59 VFVGAVFTIQVAREFINFGAGNLVGGVLAVALTRELSPVLTAVILAGRVGSAFAAEIGTM 118 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 ++ E+IDA+ + D + L+ PR+ A + LP+LT+L+ + ++G I+ Y I Sbjct: 119 RVTEQIDAMLMLKTDPIDYLVIPRLLACFLMLPILTLLSLVTGMLGGLIIATNMYGISDT 178 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 VF + + +I + +IKA I I+ G + +G+ TT VV ++ Sbjct: 179 VFLDSARNLLEIWDICSAMIKACCFGVLIAIIGCSWGLTTTGGAKGVGQSTTTAVVTALL 238 Query: 356 IVIIIDSLFAIFYFA 370 I+ + + + F Sbjct: 239 IIFVSNFFLSWVMFQ 253 >gi|37527885|ref|NP_931230.1| hypothetical protein plu4033 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787321|emb|CAE16405.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 260 Score = 229 bits (584), Expect = 6e-58, Method: Composition-based stats. Identities = 68/256 (26%), Positives = 119/256 (46%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + G + L +Q+Y VGV + ++I+ Sbjct: 4 QALAALGRRAIEVFASFGRAGFMLFRAIIGKPEPARQWPLLRQQLYSVGVRSLLIIIVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE +++I LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLILTTYSAEASLGMMVAISLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +I+PR WA IS+PLL+++ I G ++V + I Sbjct: 124 KATEQISSLEMMAVDPLRRVIAPRFWAGFISMPLLSLIFVAVGIWGGAMVGVDWKGIDSG 183 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S S ++ IK+ A + +A+ G+ S + + T VV + Sbjct: 184 FFWSSMQSAIEWQKDLLNCFIKSVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|193065385|ref|ZP_03046456.1| toluene ABC transporter, permease protein [Escherichia coli E22] gi|192927026|gb|EDV81649.1| toluene ABC transporter, permease protein [Escherichia coli E22] Length = 260 Score = 229 bits (584), Expect = 6e-58, Method: Composition-based stats. Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++++ Sbjct: 5 ALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGV 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLT++ I G S+V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGIWGGSLVGVSWKGIDSGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S + ++ LIK+ A + +++ G+ S + + T VV S Sbjct: 185 FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGVDFVLTALMFG 259 >gi|116747921|ref|YP_844608.1| hypothetical protein Sfum_0473 [Syntrophobacter fumaroxidans MPOB] gi|116696985|gb|ABK16173.1| protein of unknown function DUF140 [Syntrophobacter fumaroxidans MPOB] Length = 258 Score = 229 bits (584), Expect = 7e-58, Method: Composition-based stats. Identities = 73/257 (28%), Positives = 127/257 (49%), Gaps = 5/257 (1%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + Q LG + G A + G LS+++Q+ ++G V+ + Sbjct: 2 IRSLGAYTVVQVGFLGRLGLFLGRMLAGITRPPGKFLSVVKQIQFIGTKSFLVIGFTAIF 61 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG V+A QG + L+ G+E + +S+ +RE+G +LTA+M+ GR+GSA+ AEIG M+I Sbjct: 62 TGMVLALQGYYALASVGSEGWLGKAVSLSLIRELGPVLTALMVTGRAGSAMCAEIGIMRI 121 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 +E+IDAI M +D LI+PR+ A +I+LPLLT + I+G +V + + Sbjct: 122 DEQIDAIECMAIDPHSYLITPRLLAALIALPLLTAFCDVVGIVGGYLVGVNLLGVNAGAY 181 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV-----HSNSLGKKVTTCVVQ 352 S+ +++ G++K+ I + +G+ GV + + T VV Sbjct: 182 LDSMESSVVWKDVYMGIVKSICFGVLIIWICTYKGYYAGVDENNFGPEQVSRATTNAVVL 241 Query: 353 SISIVIIIDSLFAIFYF 369 S +++ D + Sbjct: 242 SSISILVCDYVVTSVLL 258 >gi|305664733|ref|YP_003861020.1| organic solvents resistance ABC transporter [Maribacter sp. HTCC2170] gi|88707855|gb|EAR00094.1| ABC-type transport system involved in resistance to organic solvents [Maribacter sp. HTCC2170] Length = 264 Score = 228 bits (583), Expect = 7e-58, Method: Composition-based stats. Identities = 65/246 (26%), Positives = 121/246 (49%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 ++ + +G + + F + K L+RQ Y +G + +V + F+ Sbjct: 8 TIQSVQKLRQFFVEIGELSNFAMRFFKEALKPPYEFKELLRQCYNMGNRSLVLVGVTGFI 67 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ Q L +FGA + +++ I +REIG ++TA++ AGR S I AE+GSM++ Sbjct: 68 IGLVLTLQSRPTLIEFGAVSWMPNMVGISIVREIGPVITALICAGRIASGIGAELGSMRV 127 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+ G + + L+ RI A + LPLL I + A+ G+++V ++ F ++ Sbjct: 128 TEQIDAMEVSGTNPFKYLVVTRIMATTLMLPLLVIFGDLVALYGSALVENLKGNVSFQLY 187 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 F+ ++ IK+ F IG+V +G+ + +G T VV + ++ Sbjct: 188 FNTVFDALEFGDLIPATIKSFFFGFTIGLVGCYKGYYSKKGTAGVGVAANTAVVLASLLL 247 Query: 358 IIIDSL 363 +D + Sbjct: 248 FFVDFI 253 >gi|16330753|ref|NP_441481.1| hypothetical protein slr1344 [Synechocystis sp. PCC 6803] gi|1653246|dbj|BAA18161.1| slr1344 [Synechocystis sp. PCC 6803] Length = 283 Score = 228 bits (583), Expect = 7e-58, Method: Composition-based stats. Identities = 67/249 (26%), Positives = 120/249 (48%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + + S G I G + K + +Q+ +VG + +P+ ++ + V G + Sbjct: 24 LAELSSWLRRSGQAILLLGNTSFQLFTGKIDGRNTTQQLMFVGPASLPITLITAAVIGMI 83 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 Q A + FGA ++ + RE+ ++TAV++AGR GSA AEIG+M++ E+I Sbjct: 84 FTIQVAREFLAFGAGSAVGGILMLALGRELCPIMTAVVVAGRVGSAFAAEIGTMRVTEQI 143 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ + + V L+ PR+ A I +P L++LA + ++G +++ Y I VFF Sbjct: 144 DALYMLNTNPVEYLVIPRLLACCIMVPTLSVLALVTGMMGGAVISSNVYGIANQVFFESI 203 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + T +IF G +K I I+ G + +G+ T VV S+ + + + Sbjct: 204 QTFVTPWDIFCGPVKGIVFGVLIAIIGCNWGLTTRGGAKGVGESTTAAVVTSLLAIFVSN 263 Query: 362 SLFAIFYFA 370 L + F Sbjct: 264 FLMSWIMFQ 272 >gi|304310283|ref|YP_003809881.1| Toluene tolerance ABC efflux transporter, permease [gamma proteobacterium HdN1] gi|301796016|emb|CBL44220.1| Toluene tolerance ABC efflux transporter, permease [gamma proteobacterium HdN1] Length = 260 Score = 228 bits (583), Expect = 7e-58, Method: Composition-based stats. Identities = 66/256 (25%), Positives = 128/256 (50%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + D +G + + L++Q+Y +GV + ++++ Sbjct: 3 EWLRRIGADGLGTLRTIGAAGIFLFNALWALPNPRSGTPLLVKQIYSIGVLSLVIIVVSG 62 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L+QFG+E L+++ LRE+G ++ A++ AGR+GSA+ AEIG M Sbjct: 63 VFIGMVLALQGYHILTQFGSEEALGQLVALSLLRELGPVVAALLFAGRAGSALTAEIGLM 122 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ + +G+D +R +I+PR WA I +P L ++ + +IGA +V K+ + Sbjct: 123 KATEQLASFEMIGVDPLRRIIAPRFWAGFICMPTLAVIFSAVGVIGAYLVGVKWLGVYDG 182 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ ++ ++ G+IK+ + +A+ +G+ S + + T VV S Sbjct: 183 SFWANMQNSVEWGEDVVNGVIKSFAFGAVVTWIAVFQGYDCIPTSEGISRATTRTVVFSS 242 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 243 LAVLGLDFILTAVMFG 258 >gi|85058184|ref|YP_453886.1| hypothetical protein SG0206 [Sodalis glossinidius str. 'morsitans'] gi|84778704|dbj|BAE73481.1| conserved hypothetical protein [Sodalis glossinidius str. 'morsitans'] Length = 260 Score = 228 bits (583), Expect = 7e-58, Method: Composition-based stats. Identities = 67/258 (25%), Positives = 124/258 (48%), Gaps = 1/258 (0%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 + + I F + H G + L++++Y VGV + ++++ Sbjct: 2 VREAIASFGRRGINICHGFGRAGVMLFNALIGKPALREQWPLLVKKLYGVGVLSLVIIMV 61 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 G V+ QG L+ + AE L+++ LRE+G ++TA++ AGR+GSA+ AEIG Sbjct: 62 SGLFIGMVLGLQGYIILTTYSAESSLGMLVALSLLRELGPVVTALLFAGRAGSALTAEIG 121 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 MK E++ ++ M +D +R +++PR WA +IS+PLLT + I G ++V ++ I Sbjct: 122 LMKATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLTAIFVAVGIWGGAVVGVEWKGID 181 Query: 294 FAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 F+S ++ +IK+ A + +A+ G+ S + + T VV Sbjct: 182 SGFFWSAMQGAVDWRQDLVNCVIKSVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVH 241 Query: 353 SISIVIIIDSLFAIFYFA 370 + V+ +D + F Sbjct: 242 ASLAVLGLDFVLTALMFG 259 >gi|261416607|ref|YP_003250290.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373063|gb|ACX75808.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 354 Score = 228 bits (583), Expect = 8e-58, Method: Composition-based stats. Identities = 81/353 (22%), Positives = 155/353 (43%), Gaps = 16/353 (4%) Query: 21 SEIADDVVMAINKSIQSDSAIVDLSAITEIDT---IGAELIMYFMEKYHGKIKLQGVSTH 77 + + ++ + ++ +D S++ +D L+ EK K+ L+ Sbjct: 14 AANSKKLLSSCKSALTKGELHLDGSSLASMDYSADAFFALLAELSEKTGNKLVLEHFPPE 73 Query: 78 IEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVIS 137 I+Q + RK + +KPQR N+ +G + + +L L+ + Sbjct: 74 IKQHLQNL----RKMVPPEKPQRE-----TNNILEMMGGAGFSLLKEV---FEVLVLLFT 121 Query: 138 NTGEFCASSY-KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE 196 + K K + +QM+ G + + L + +A Q + L+ G Sbjct: 122 AIYWTIVGPFDKGKIHFGGITKQMFKSGSEAMGICFLFVGLICLTMALQSSVMLNAVGGG 181 Query: 197 IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILI 256 + + L EIG LLT +++AGRSGSA+ AEI +M + EE+ A+++M + V+ L+ Sbjct: 182 SYLASGLGFLIFAEIGPLLTTIILAGRSGSAMAAEIANMSVCEEVKALKSMAIPPVQYLV 241 Query: 257 SPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316 PR AL I+ P+L+ A+ ++ + + DI F+ + IK Sbjct: 242 VPRFIALSITTPILSFSASIVGSFAGFLIAYFFCDISFSNYMMGLRDGIDPMTFLKSTIK 301 Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 A + ++A +G + ++GK T+ VV +I ++I D+LFA ++ Sbjct: 302 ALVFGWIVTLIACNKGLNAHGGAEAVGKATTSSVVAAICTIVISDTLFAFIFY 354 >gi|311695326|gb|ADP98199.1| ABC-type transport system involved in resistance to organic solvents, permease component [marine bacterium HP15] Length = 260 Score = 228 bits (583), Expect = 8e-58, Method: Composition-based stats. Identities = 66/255 (25%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 +I F G + L++Q+Y VGV + +V++ Sbjct: 4 RIAAFGRLGLDIVSSFGRSGRFLAGVLGGVPRPATGFPLLMKQIYAVGVLSLAIVVVSGL 63 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG LS +G+E ++++ +RE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 64 FIGMVLGLQGYTILSDYGSEAAIGQMIALTLVRELGPVVTALLFAGRAGSALTAEIGLMK 123 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ MG+D +R +I+PR+WA I++P+L ++ + I G +V + + Sbjct: 124 ATEQLSSMEMMGVDPLRRVIAPRLWAGFIAMPVLAVIFSVVGIWGGMLVGVDWLGVFEGS 183 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+ S+ ++ G+IK+ +A+ +G+ S + T VV S Sbjct: 184 FWGNMQSSVDFVDDVLNGVIKSVVFGFVCAWIAVYQGYDCVPTSAGISSATTKTVVYSSL 243 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 AVLGLDFVLTAVMFG 258 >gi|251793143|ref|YP_003007871.1| ABC transporter permease [Aggregatibacter aphrophilus NJ8700] gi|247534538|gb|ACS97784.1| conserved ABC-type transport system protein, permease component [Aggregatibacter aphrophilus NJ8700] Length = 261 Score = 228 bits (583), Expect = 8e-58, Method: Composition-based stats. Identities = 78/265 (29%), Positives = 132/265 (49%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N +G+ + F +L G K F L I+Q++ +GV Sbjct: 2 LVNFISALGRNTINFGRALGRAGFLL------FGALVGKPQVSKHFPL-FIKQLHVLGVQ 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + +++L G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GS Sbjct: 55 SLLIIMLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGS 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ ++ M +D +R +I+PR WA II++P+L+I+ I G S+V Sbjct: 115 ALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGIIAMPILSIIFIAIGIWGGSLVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + + F+S ++ T +I G IK+ F A A+ +A+ G+ S + K Sbjct: 175 VDWKGVDAGSFWSVMQNSVTWGHDILNGSIKSLFFAIAVVWIALFNGYDCIPTSEGISKA 234 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + +V+ +D + F Sbjct: 235 TTRTVVHASLVVLGLDFVLTAIMFG 259 >gi|281356267|ref|ZP_06242760.1| protein of unknown function DUF140 [Victivallis vadensis ATCC BAA-548] gi|281317636|gb|EFB01657.1| protein of unknown function DUF140 [Victivallis vadensis ATCC BAA-548] Length = 272 Score = 228 bits (583), Expect = 8e-58, Method: Composition-based stats. Identities = 68/268 (25%), Positives = 136/268 (50%), Gaps = 2/268 (0%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 + S K L + + +D C + T + K + + + M Sbjct: 3 ARSPRSLKQLCIEVADSAIALRDDLCLFCTFSRQLGKATLDAIRHPRKIRRY--DVYYYM 60 Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 G +P++ L+ F+ G ++A Q QL +FG E + ++L+ + + E+ L+TAV++ Sbjct: 61 DNCGSDAMPIIALLGFLIGVILAFQAIVQLRRFGVESYVVNLVGTVIVTELAPLVTAVVL 120 Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280 AGR+GS+ AE+G+MK +EEIDA+ TMG D R L+ P++ AL++ +P LTI+++ I Sbjct: 121 AGRTGSSFAAELGTMKADEEIDAMVTMGFDPGRFLLFPKMLALLLIMPGLTIISDVCGIA 180 Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 G +++ + + ++ ++ GL+K+ A + + +G ++ Sbjct: 181 GGMVIVCSMLQVSTGEYLTKTFEIIQPIDLAQGLVKSFVFAVIVAGIGCMKGLNAERNAQ 240 Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFY 368 +G+ T+ VV SI ++++ D++ + Sbjct: 241 GVGRSATSAVVTSIFLIVVTDAILTSCF 268 >gi|239994339|ref|ZP_04714863.1| putative transport protein (ABC superfamily, membrane) [Alteromonas macleodii ATCC 27126] Length = 258 Score = 228 bits (583), Expect = 8e-58, Method: Composition-based stats. Identities = 71/264 (26%), Positives = 131/264 (49%), Gaps = 9/264 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 IG K + + A +L + +I+Q+Y VGV + Sbjct: 2 KFFQSIGAKTIGKVTAVGRAALMLFGALIAVPRLKNVPL--------VIKQLYVVGVQSL 53 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++++ G V+A QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ Sbjct: 54 LIIMVSGLFIGMVMALQGYTILVDYGAEGSLGPMVALSLLRELGPVVTALLFAGRAGSAL 113 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG MK E++ ++ M +D +R +++PR WA ++++P+L I+ + I+G +V Sbjct: 114 TAEIGLMKATEQLSSLEMMAVDPLRRIVAPRFWAGMLAMPMLAIIFSAIGILGGHLVGVD 173 Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + ++S ST ++ G+IK+ A + +A+ +G+ S + K T Sbjct: 174 WLGVDAGSYWSIMQSTVDWNQDVINGVIKSLVFALVVTWIAIFKGYDSIPTSEGISKATT 233 Query: 348 TCVVQSISIVIIIDSLFAIFYFAI 371 VV S V+ +D + F I Sbjct: 234 ETVVYSSLAVLGLDFVLTALMFGI 257 >gi|283779915|ref|YP_003370670.1| hypothetical protein Psta_2136 [Pirellula staleyi DSM 6068] gi|283438368|gb|ADB16810.1| protein of unknown function DUF140 [Pirellula staleyi DSM 6068] Length = 289 Score = 228 bits (583), Expect = 9e-58, Method: Composition-based stats. Identities = 65/266 (24%), Positives = 121/266 (45%) Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 + + ++ + +G + + +L+ Y VGV Sbjct: 12 PPAGILQSLADQVTDWGAVVVDGLITIGDLTIFAMRTISWMLFKLPRRETLLPNFYQVGV 71 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 +PV+ L G V+A Q F G E ++++ +RE+G +L A M+AGR G Sbjct: 72 LSLPVIALTGTFIGMVLAVQSYFTFRDLGLETRMGAVINMTLVRELGPVLAATMLAGRVG 131 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 A+ AE+G+M++ E+IDA+ +MG D + L+ PR A + +P LTI+A+F ++G Sbjct: 132 CAMAAELGTMRVTEQIDALESMGADPIYYLVVPRFLACLFLIPTLTIMADFMGVVGGYFY 191 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 I ++ ++F+G++K+ F AI +V+ GF + +G+ Sbjct: 192 STVVLSIDKHHYWYNSEQFVGNFDLFSGILKSLFFGAAIAVVSCYRGFHCTPGAEGVGRA 251 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAI 371 T V S ++++ID + + Sbjct: 252 ATAAFVHSFVLILVIDLFLGKMLYTL 277 >gi|33594617|ref|NP_882261.1| hypothetical protein BP3758 [Bordetella pertussis Tohama I] gi|33564693|emb|CAE44015.1| putative membrane protein [Bordetella pertussis Tohama I] Length = 261 Score = 228 bits (582), Expect = 9e-58, Method: Composition-based stats. Identities = 63/261 (24%), Positives = 128/261 (49%), Gaps = 8/261 (3%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170 +G + I LG +++ +G + +Q++++G + + Sbjct: 7 LNGLGGWVRGQIGGIGYFTRFLGALLARSGIAVRRP-------GLVSQQVHFIGNYSLLI 59 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 + + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ A Sbjct: 60 IAVSGLFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTALLFAGRAGTSLTA 119 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 EIG MK E++ A+ M +D +R ++ PR W II++P+L + + I+G IV Sbjct: 120 EIGLMKAGEQLSAMEVMAVDPMRRVLVPRFWGGIIAMPVLAAVFSMVGILGGWIVGVLMI 179 Query: 291 DIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 + F+S+ + L ++ G+IK+ + +VA+ EG+ +G+ T Sbjct: 180 GVDAGAFWSQMQNGVDVLDDVLNGVIKSLVFGVTVTLVALYEGWQARPTPEGVGRATTRT 239 Query: 350 VVQSISIVIIIDSLFAIFYFA 370 VV V+ +D + F Sbjct: 240 VVVGSLAVLGLDFILTALMFG 260 >gi|68249643|ref|YP_248755.1| ABC transporter permease [Haemophilus influenzae 86-028NP] gi|68057842|gb|AAX88095.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae 86-028NP] gi|309973443|gb|ADO96644.1| Phospholipid ABC transporter, permease component [Haemophilus influenzae R2846] Length = 261 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 77/265 (29%), Positives = 136/265 (51%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N +GK+++ F +L G + + L++QM+ +GV Sbjct: 2 IVNFISALGKQVIDFFRALGRAGFML------FGALIGKP-QIRKHFPLLVKQMHVLGVQ 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + +++L G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GS Sbjct: 55 SLLIILLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGS 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+P+L+IL I G+S+V Sbjct: 115 ALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVISMPILSILFIAIGIWGSSLVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + + F+S ++ + + +I G IKA F A A+ +A+ G+ S + + Sbjct: 175 VDWKGVDSGSFWSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYDCMPTSEGISQA 234 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + +V+ +D + F Sbjct: 235 TTRTVVHASLVVLGLDFILTAIMFG 259 >gi|303327746|ref|ZP_07358186.1| thioredoxin family protein [Desulfovibrio sp. 3_1_syn3] gi|302862107|gb|EFL85041.1| thioredoxin family protein [Desulfovibrio sp. 3_1_syn3] Length = 267 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 74/266 (27%), Positives = 132/266 (49%), Gaps = 12/266 (4%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 +G+ ++ I+ + ++ G+ S+ F L +Q+Y +G + Sbjct: 9 GFLRLLGRPCLRGIDAVGGMTLFM---LAGLGQIFTSARIFPRSL----QQIYVIGYKSL 61 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 V++LI G V+ QG + L QFG+ +S+ +RE+G +LTA+M+ GR+GS++ Sbjct: 62 FVILLIGIFCGMVLGLQGYYTLIQFGSVGMLGSAVSLTLIRELGPVLTAIMLTGRAGSSM 121 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG M+I ++IDA+ M ++ + L+SPR+ A +IS PLLT + + I+G + Sbjct: 122 AAEIGVMRITDQIDALDVMDINSLGYLVSPRLVAALISFPLLTAIFDVIGILGGYLTGVL 181 Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLG 343 I +F R S+ T+ +I G +KA + V +G+ V ++G Sbjct: 182 MLGINEGAYFYRIASSVTMTDISGGFVKALVFGLLVTTVCCHQGYYTHRRRDSVGPEAVG 241 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYF 369 T+ VV S +++ D + F Sbjct: 242 NATTSAVVISCVLILAADYVLTSFLL 267 >gi|56459515|ref|YP_154796.1| ABC-type transport system involved in resistance to organic solvents, permease [Idiomarina loihiensis L2TR] gi|56178525|gb|AAV81247.1| ABC-type transport system involved in resistance to organic solvents, permease component [Idiomarina loihiensis L2TR] Length = 259 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 67/254 (26%), Positives = 122/254 (48%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I +G ++ + I+QMY VGV + +VI+ Sbjct: 5 IRSVGRQVLDSLAGIGYALAMLMGAIIGKPQPAKSWPLFIKQMYVVGVLSMLIVIVSGLF 64 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L +GAE ++++ LRE+G ++T ++ AGR+GSA+ AEIG MK Sbjct: 65 IGMVLGLQGYTILVDYGAEQSLGPMVALSLLRELGPVVTGLLFAGRAGSALTAEIGLMKA 124 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +I+PR WA ++S+PLL ++ + I G +V + + F Sbjct: 125 TEQLSSLEMMAVDPLRRVIAPRFWAGVVSMPLLALMFSAVGIYGGYLVGSGWLGVDEGAF 184 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S S ++ G+IK+ A + +A+ +G+ S + T+ VV + Sbjct: 185 WSVMQSAVDWQDDLLNGIIKSIVFAFVVTWIALYKGYRSVPTSAGISAATTSTVVTASLA 244 Query: 357 VIIIDSLFAIFYFA 370 ++ +D + F Sbjct: 245 ILGLDFILTAIMFG 258 >gi|78064990|ref|YP_367759.1| ABC transporter, inner membrane subunit [Burkholderia sp. 383] gi|77965735|gb|ABB07115.1| ABC transporter, inner membrane subunit [Burkholderia sp. 383] Length = 255 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + + ++ + +Q++++G Sbjct: 1 MISAIGRYVIGGLERTGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D ++ +I+PR+WA II++PLL + N ++G V Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKNVIAPRMWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + ++ G++K+ A+ +A+ +G+ + + T Sbjct: 174 IGVDPGAFWSQMQGGVQVWADVGNGVLKSIVFGFAVTFIALYQGYEAKPTPEGVSRATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255 >gi|218439944|ref|YP_002378273.1| hypothetical protein PCC7424_3003 [Cyanothece sp. PCC 7424] gi|218172672|gb|ACK71405.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7424] Length = 264 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 64/239 (26%), Positives = 115/239 (48%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 L I G+ K K + + QM VG + + ++ + G V Q + + Sbjct: 18 LSAAILLGGQVFLHLLKNKIHHRNTLDQMAIVGPESLTISLVTAAFVGMVFTIQVSREFI 77 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 FGA + ++S+ RE+ +LTAV++AGR GSA AEIG+M++ E+IDA+ + D Sbjct: 78 YFGAGSYVGGVLSLALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQIDALYMLKTDP 137 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 + L+ PR+ A + LP+LT+L+ + I G V Y+I VF + + ++ Sbjct: 138 IDYLVIPRVLACSLMLPILTVLSLLTGIAGGIAVAESLYNISPVVFLNSARNFLQTWDLV 197 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +IK+ I ++ G + +G+ TT VV ++ + + + + F Sbjct: 198 SCMIKSGIFGSLIAVIGCSWGLTTSGGAKGVGQSTTTAVVTALLAIFVANFFLSWLMFQ 256 >gi|159029293|emb|CAO90159.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 264 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 63/239 (26%), Positives = 116/239 (48%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG G+ K + + QM VG + + ++ + G V Q A + Sbjct: 18 LGAAGLLAGQTFLHILNGKIHRRNTLEQMSIVGPESLTIALITAAFVGMVFTIQVAREFI 77 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 FGA F ++S+ RE+ +LTAV++AGR GSA AEIG+M++ E+IDA+ + D Sbjct: 78 FFGAGSFVGGVLSLALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQIDALYILKTDP 137 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 + L+ PR+ A + LPLLTI++ + ++G ++ Y + +++F + ++ Sbjct: 138 IDYLVIPRVIACSLMLPLLTIISLVTGLLGGLLISDSLYGVSYSLFLQSAQNFLQTWDLI 197 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + ++K+ I I+ G + +G+ TT VV S+ + + + + F Sbjct: 198 SSMLKSLIFGILIAIIGCSWGLTTTGGAKGVGQSTTTAVVTSLLAIFVANFFLSWLMFQ 256 >gi|218550477|ref|YP_002384268.1| toluene ABC transporter membrane protein [Escherichia fergusonii ATCC 35469] gi|218358018|emb|CAQ90664.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia fergusonii ATCC 35469] gi|324115202|gb|EGC09166.1| inner membrane protein yrbE [Escherichia fergusonii B253] gi|325498775|gb|EGC96634.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia fergusonii ECD227] Length = 260 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 74/255 (29%), Positives = 123/255 (48%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + F + G +F+ LIRQ+Y VGV + ++I+ Sbjct: 5 ALAAFGRKGITTLRTFGRAGLMLFNAIVGKPEFRKHTPLLIRQIYNVGVLSMLIIIVSGV 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLTI+ I G S+V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S + ++ LIK+ A + +A+ G+ S + + T VV + Sbjct: 185 FWSAMQNAVDWRLDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|283788167|ref|YP_003368032.1| putative organic solvent tolerance protein [Citrobacter rodentium ICC168] gi|282951621|emb|CBG91321.1| putative organic solvent tolerance protein [Citrobacter rodentium ICC168] Length = 260 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++++ Sbjct: 5 ALATLGHKGIKTVSTFGRAGLMLFNALVGKPEFRKHTPLLVRQLYNVGVLSMLIILVSGV 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLTIL I G S+V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTILFVAVGIWGGSLVGVSWKGIDAGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S + ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 185 FWSAMQNAVDWRLDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|85858103|ref|YP_460305.1| organic solvents resistance ABC transporter permease [Syntrophus aciditrophicus SB] gi|85721194|gb|ABC76137.1| ABC-type transport system involved in resistance to organic solvents, permease component [Syntrophus aciditrophicus SB] Length = 284 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 80/290 (27%), Positives = 142/290 (48%), Gaps = 13/290 (4%) Query: 84 LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFC 143 ++ + +++ +G+ ++ +IN+S G Sbjct: 2 TVAMRPDIQESSEEKAGWNAIRLLSWPFAQLGRSVISWINNS-------GAAAIFLLLAA 54 Query: 144 ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203 ++ + L+ + +Q+YY+G +++L+ TG V+ Q L Q GAE L+ Sbjct: 55 LKIFRPRQ-LMKITQQIYYIGARSTMIIMLVGLFTGMVLGLQSYHALVQVGAEGALGTLV 113 Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263 ++ +RE+G +LTA+MI R+GSAI A+IG +I+E+IDA+ TM +D +R LISPRI A Sbjct: 114 ALSLIRELGPVLTAIMITARAGSAITAQIGIERISEQIDALDTMHIDPLRYLISPRIAAA 173 Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323 IIS P+LT L + I+G+ I FF R S+ ++++ G IKA A Sbjct: 174 IISFPVLTALFDLIGILGSYISGVLIMGANAGTFFHRVQSSVEMSDVNEGFIKAIVFAVI 233 Query: 324 IGIVAMKEGFAVGV-----HSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + V +G+ + + ++G T+ VV S ++++ D + Sbjct: 234 VSTVCCYQGYFAHMRPDSHGAKAVGLSTTSAVVLSCVLILVSDYVVTSLL 283 >gi|254497755|ref|ZP_05110528.1| toluene tolerance protein Ttg2B [Legionella drancourtii LLAP12] gi|254353048|gb|EET11810.1| toluene tolerance protein Ttg2B [Legionella drancourtii LLAP12] Length = 260 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 65/265 (24%), Positives = 126/265 (47%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 +G + + ++D + L ++ L Q+Y+VGV Sbjct: 1 MLEFITRLGNRGTRVLHDLGTSGLFLFFMLF-------RRPNISRLWPLLCHQIYFVGVL 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 ++++ + G V+ QG L +FGA L+++ RE+G +++A++ AGR+GS Sbjct: 54 SCLIIVVSALFIGMVVGLQGYNTLQKFGASSQLGQLLALSISRELGPVISALLFAGRAGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ ++ MG+D + +I PR A I+LP+L+++ + AI+G + Sbjct: 114 ALTAEIGLMKTTEQLSSMDMMGVDPLGRVIYPRFMAGFITLPVLSLIFSAVAILGGYFIG 173 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + + F+S + ++ +G+IK+ A + +A+ +GF + + + Sbjct: 174 VHWLGVDAGSFWSNMQAAVNFRIDVLSGIIKSLVFAFVVTWIAVFQGFECVPTAEGISQA 233 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV S V+ +D L Sbjct: 234 TTKTVVYSSLAVLGLDFLLTAMMIG 258 >gi|113476613|ref|YP_722674.1| hypothetical protein Tery_3053 [Trichodesmium erythraeum IMS101] gi|110167661|gb|ABG52201.1| protein of unknown function DUF140 [Trichodesmium erythraeum IMS101] Length = 249 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 74/237 (31%), Positives = 119/237 (50%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 G+ + K + + I QM VG + +V+L + G V Q A +L F Sbjct: 3 AATYLAGQVFVHLFHGKIYRRNTIEQMAIVGPESLLIVLLTASFVGMVFTIQVARELVAF 62 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 G ++++ RE+G +LTAV++AGR GSA AEIG+MK+ E+IDA+ + D V Sbjct: 63 GTANMVGGMLALTLSRELGPVLTAVVVAGRVGSAFAAEIGTMKVTEQIDALYILKTDPVD 122 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 L+ PR+ A + +P+LT+L +AI G I+ YDIP +++ S TL ++ +G Sbjct: 123 YLVIPRVIACGVMMPILTLLCLVAAIFGGLIIAVNLYDIPQSMYIDSVRSFLTLWDLCSG 182 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 L K+ I ++ G + +GK TT VV S+ + I + + F Sbjct: 183 LTKSVVFGVLIAVIGTSWGLTTTGGAKGVGKSTTTAVVTSLISIFIFNFFLSWAMFQ 239 >gi|209964880|ref|YP_002297795.1| ABC transporter permease protein, putative [Rhodospirillum centenum SW] gi|209958346|gb|ACI98982.1| ABC transporter permease protein, putative [Rhodospirillum centenum SW] Length = 256 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 63/253 (24%), Positives = 123/253 (48%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + G + T + + +L + RQM +G +PVV L + Sbjct: 4 IAGIGRATLVFMEATGRLALFTAIALSHCLRPPFYLRHIGRQMIDIGYYSLPVVGLTALF 63 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG V+A Q S+F AE ++ + RE+G +L +M+AGR G+A+ AE+G+M++ Sbjct: 64 TGMVLALQSYSGFSRFEAESAIATVVVLSITRELGPVLAGLMVAGRIGAAMAAELGTMRV 123 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++DA+ T+ + + L+ PR+ A + LPLL ++A+ + G +V + + Sbjct: 124 TEQVDALTTLSTNPFKYLVVPRLLAGTLMLPLLVLVADIIGVFGGFLVGVYRLNFNAGGY 183 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + + ++ +GL+KA AI ++ G+ + +G T VV + ++ Sbjct: 184 ITSTWKYLEVMDVVSGLVKAGAFGFAISLMGCYHGYHSRGGAQGVGAATTNAVVSASILI 243 Query: 358 IIIDSLFAIFYFA 370 ++++ L +F+ Sbjct: 244 LVLNYLLTGIFFS 256 >gi|149194581|ref|ZP_01871677.1| abc transporter, permease protein [Caminibacter mediatlanticus TB-2] gi|149135325|gb|EDM23805.1| abc transporter, permease protein [Caminibacter mediatlanticus TB-2] Length = 259 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 115/263 (43%), Gaps = 7/263 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 L +IG + I ++ Y+ K L Q+Y++G Sbjct: 2 LLKLLDNIGTFTLNLIKGFGDFTLFQFNILKLI---FTPPYRIK----ELFNQIYFMGYG 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + V+ L SF TG V A Q +FG E F + I ++E+G + ++M+ R S Sbjct: 55 SLGVIFLTSFFTGLVEAVQLYNGFHKFGVEDFMGYTIFISIVKELGPVFASLMVISRGIS 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A AE+GSMK+ E+IDA+ M ++ + LI PRI A IISLPLL + + + IGA ++ Sbjct: 115 AYAAELGSMKVTEQIDALEVMAVNSKQYLIVPRILATIISLPLLILFFDAVSNIGAYLIS 174 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + + + +I G+IK I + G+ + +G+ Sbjct: 175 TYSLGVNGFAYLDHIRQFGEIRDIIEGVIKGAVFGYIISAIGTYIGYNTRGGAKGVGQST 234 Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369 T VV S V + D + + + Sbjct: 235 TKAVVYSSVAVFVADYVLSAIFL 257 >gi|332140253|ref|YP_004425991.1| putative transport protein (ABC superfamily, membrane) [Alteromonas macleodii str. 'Deep ecotype'] gi|327550275|gb|AEA96993.1| putative transport protein (ABC superfamily, membrane) [Alteromonas macleodii str. 'Deep ecotype'] Length = 258 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 69/248 (27%), Positives = 130/248 (52%), Gaps = 2/248 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + +G + + K L+ I+Q+Y VGV + ++++ G V+A Sbjct: 11 TIGKITAIGRAALMLFGALIAIPRAKNIPLT-IKQLYVVGVQSLLIIMVSGLFIGMVMAL 69 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK E++ ++ Sbjct: 70 QGYTILVDYGAEGSLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSL 129 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D +R +++PR WA ++++P+L I+ + I+G +V + + ++S ST Sbjct: 130 EMMAVDPLRRIVAPRFWAGMLAMPMLAIIFSAIGILGGHLVGVDWLGVDAGSYWSIMQST 189 Query: 305 ATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 ++ G+IK+ A + +A+ +G+ S + K T VV S V+ +D + Sbjct: 190 VDWNQDVINGVIKSLVFALVVTWIAIFKGYDSIPTSEGISKATTETVVYSSLAVLGLDFV 249 Query: 364 FAIFYFAI 371 F I Sbjct: 250 LTALMFGI 257 >gi|170731749|ref|YP_001763696.1| hypothetical protein Bcenmc03_0394 [Burkholderia cenocepacia MC0-3] gi|254246538|ref|ZP_04939859.1| hypothetical protein BCPG_01288 [Burkholderia cenocepacia PC184] gi|124871314|gb|EAY63030.1| hypothetical protein BCPG_01288 [Burkholderia cenocepacia PC184] gi|169814991|gb|ACA89574.1| protein of unknown function DUF140 [Burkholderia cenocepacia MC0-3] Length = 255 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + + ++ + +Q++++G Sbjct: 1 MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D ++ +I+PR+WA II++PLL + N ++G V Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKNVIAPRMWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + ++ G++K+ A+ +A+ +G+ + + T Sbjct: 174 IGVDPGAFWSQMQGGVQVWADVGNGVLKSIVFGFAVTFIALYQGYEAKPTPEGVSRATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255 >gi|10086491|gb|AAG12551.1|AC007797_11 Hypothetical Protein [Arabidopsis thaliana] Length = 283 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 55/232 (23%), Positives = 113/232 (48%) Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198 G+ K K + ++Q+ G + V +L S G Q + ++ G Sbjct: 42 AGQVVLRILKGKIHWRNTLQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFTRLGLNRS 101 Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258 ++++ RE+ ++T++++AGR GSA AE+G+M+++E+ D +R +G D + LI+P Sbjct: 102 IGGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADPIDYLITP 161 Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318 R+ A ++LP LT++ + ++++ Y I + H +I + +IK+ Sbjct: 162 RVIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMDSAHRALRPWDIVSAMIKSQ 221 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 I +++ G + +G+ T+ VV S+ + I D + + F+F Sbjct: 222 VFGAIISVISCSWGVTTTGGAKGVGESTTSAVVMSLVGIFIADFVLSSFFFQ 273 >gi|206890273|ref|YP_002248716.1| toluene tolerance protein Ttg2B [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742211|gb|ACI21268.1| toluene tolerance protein Ttg2B [Thermodesulfovibrio yellowstonii DSM 11347] Length = 256 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 70/260 (26%), Positives = 127/260 (48%), Gaps = 7/260 (2%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 IG+ ++ L + + +KF+ FL RQ+ + G + Sbjct: 4 FIKFIGRYSIELFVFLGKMFIFL---VDSIYYIFIPPFKFRNFL----RQVRFFGNKSMI 56 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 VVI +G V+A QG + L++FGAE ++++ +RE+G +L A+M+ GR+GSA+ Sbjct: 57 VVIFTGAFSGMVLALQGYYALNKFGAEALLGPVVALSLIRELGPVLCALMVTGRAGSAVT 116 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG M+I E+IDA+ M ++ ++ ++ P I A I++ PLLT + + I G +V Sbjct: 117 AEIGIMRITEQIDALTVMAVNPMKYVVVPNILAGIVAFPLLTAVFDVIGIYGGYLVSVHA 176 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 + +FS+ + +I GL K+ + + G+ G + + + T Sbjct: 177 LGLSEGTYFSQMELYVDMEDIRIGLYKSLSFGLLVTWICTFMGYTSGYGARGVSRATTNA 236 Query: 350 VVQSISIVIIIDSLFAIFYF 369 VV S ++++ D + F Sbjct: 237 VVLSSVVILLWDYMLGAFLL 256 >gi|239906932|ref|YP_002953673.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1] gi|239796798|dbj|BAH75787.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1] Length = 269 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 75/271 (27%), Positives = 141/271 (52%), Gaps = 12/271 (4%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 + + +G+ ++F+ + LG + T + +++Q+Y++ Sbjct: 6 LSVLLSPATALGRVTLRFVAE-------LGGLFLFTLQGLWRILVPAPSWSKIVQQVYFI 58 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 GV + V+ LI TG V+ QG + L +FG+E +++ +RE+G +LTA+MI GR Sbjct: 59 GVKSIFVIALIGLFTGMVLGLQGYYTLVKFGSEGLLGAAVALSIIRELGPVLTAIMITGR 118 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 +GS++ AE+G M+I+E+IDA+ TM ++ +R L++PR+ A +I PLLT + + I+G Sbjct: 119 AGSSMAAELGIMRISEQIDALSTMDINPMRFLVAPRLAASLICFPLLTAIFDVVGILGGY 178 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVH 338 + I V+F R +T LA++ G +K+ A + ++ EG+ G Sbjct: 179 LSGCVLLGINPGVYFDRIDATVELADVTGGFVKSVVFALLVAVICCYEGYFTHARQGGFG 238 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + + T+ VV S ++++ D + F Sbjct: 239 AKGVSLATTSAVVLSCVVILVADYVLTSFLL 269 >gi|33598744|ref|NP_886387.1| hypothetical protein BPP4258 [Bordetella parapertussis 12822] gi|33603818|ref|NP_891378.1| hypothetical protein BB4845 [Bordetella bronchiseptica RB50] gi|33574874|emb|CAE39537.1| putative membrane protein [Bordetella parapertussis] gi|33577943|emb|CAE35208.1| putative membrane protein [Bordetella bronchiseptica RB50] Length = 261 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 63/261 (24%), Positives = 128/261 (49%), Gaps = 8/261 (3%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170 +G + I LG +++ +G + +Q++++G + + Sbjct: 7 LSGLGGWVRGQIGGIGYFTRFLGALLARSGIAVRRP-------GLVSQQVHFIGNYSLLI 59 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 + + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ A Sbjct: 60 IAVSGLFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTALLFAGRAGTSLTA 119 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 EIG MK E++ A+ M +D +R ++ PR W II++P+L + + I+G IV Sbjct: 120 EIGLMKAGEQLSAMEVMAVDPMRRVLVPRFWGGIIAMPVLAAVFSMVGILGGWIVGVLMI 179 Query: 291 DIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 + F+S+ + L ++ G+IK+ + +VA+ EG+ +G+ T Sbjct: 180 GVDAGAFWSQMQNGVDVLDDVLNGVIKSLVFGVTVTLVALYEGWQARPTPEGVGRATTRT 239 Query: 350 VVQSISIVIIIDSLFAIFYFA 370 VV V+ +D + F Sbjct: 240 VVVGSLAVLGLDFILTALMFG 260 >gi|224827292|ref|ZP_03700385.1| protein of unknown function DUF140 [Lutiella nitroferrum 2002] gi|224600505|gb|EEG06695.1| protein of unknown function DUF140 [Lutiella nitroferrum 2002] Length = 261 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 74/267 (27%), Positives = 136/267 (50%), Gaps = 8/267 (2%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 + + H+G + I + L ++ +G+ L IR++Y+ Sbjct: 2 FETLTAPLRHLGHVTINAIWRLGFASRFLLAILLQSGQSFRR-------LNLTIREVYFA 54 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 GV + ++++ G V+ QG LS+FG+ L+++ LRE+G +L A++ A R Sbjct: 55 GVLSLIIIVVSGLFVGMVLGLQGYNTLSRFGSADALGALVALSLLRELGPVLAALLFASR 114 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 SGSA+ AEIG MK E++DA+ M ++ + +++PR WA +IS+P+L L N + I G Sbjct: 115 SGSAMTAEIGLMKATEQLDAMSVMAVNPIARVVAPRFWAGVISMPVLAALFNVTGIFGGY 174 Query: 284 IVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 V + + F+S+ ++ L ++ GLIK+ F A+ ++A+ EG+ + + Sbjct: 175 FVGVQLIGLDEGTFWSQMQNSVDLHNDVINGLIKSLFFGIAVTLIAVFEGYDATPTAAGV 234 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYF 369 T VV S +++ +D + F F Sbjct: 235 SSATTRTVVTSALVILALDFVLTAFMF 261 >gi|330432403|gb|AEC17462.1| conserved hypothetical protein [Gallibacterium anatis UMN179] Length = 261 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 70/254 (27%), Positives = 126/254 (49%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + LG +F+ +++Q+Y +GV + +++L Sbjct: 6 IERLGKRGVHWLCTLGKSALMLYGALVGVPQFRKNFPLVVKQLYVLGVQSLLIIVLSGLF 65 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 IGMVLGLQGYVILVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ + M ++ +R +I+PR WA +I++PLL ++ I G S+V + + F Sbjct: 126 TEQLSGLEMMAVNPLRRVIAPRFWAGMIAMPLLALIFTAVGIWGGSLVGVDWKGVDGGSF 185 Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S S+ +I G+IK+ A ++ +A+ G+ S + + T VVQ+ + Sbjct: 186 WSVMQSSVVWGKDIGNGIIKSLCFALSVVWIALFNGYNALPTSEGISQATTKTVVQASLV 245 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 246 VLALDFILTALMFG 259 >gi|75907908|ref|YP_322204.1| hypothetical protein Ava_1687 [Anabaena variabilis ATCC 29413] gi|75701633|gb|ABA21309.1| Protein of unknown function DUF140 [Anabaena variabilis ATCC 29413] Length = 263 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 69/239 (28%), Positives = 116/239 (48%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 L I G+ + K + QM VG + + +L + GAV Q A + Sbjct: 15 LLAAIFLGGQAIVHLLRGKIHWRNTREQMAAVGPDSLFIALLTAVFVGAVFTIQVAREFI 74 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 FGA ++++ RE+ +LTAV++AGR GSA AEIG+M++ E+IDA+ + D Sbjct: 75 NFGAGNLVGGVLAVALTRELSPVLTAVILAGRVGSAFAAEIGTMRVTEQIDAMLMLKTDP 134 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 + L+ PR+ A + LP+LT+L+ + I+G I+ Y I VF + + +I Sbjct: 135 IDYLVIPRLLACFLMLPILTLLSLVTGILGGLIIATNMYGISDTVFLDSARNLLEVWDIC 194 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +IKA I I+ G + +G+ TT VV ++ I+ + + + F Sbjct: 195 SAMIKACCFGVLIAIIGCSWGLTTTGGAKGVGQSTTTAVVTALLIIFVSNFFLSWVMFQ 253 >gi|284929638|ref|YP_003422160.1| hypothetical protein UCYN_11070 [cyanobacterium UCYN-A] gi|284810082|gb|ADB95779.1| conserved hypothetical integral membrane protein [cyanobacterium UCYN-A] Length = 263 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 68/239 (28%), Positives = 114/239 (47%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 L I G+ K K + + QM VG + + ++ + G V Q A + Sbjct: 18 LVAAILLGGQVFFHILKTKIHKRNTLEQMSVVGPESLTISMITAAFVGMVFTIQVAREFI 77 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 FGA ++++ RE+ +LTAV++AGR GSA AEIG+M++ E++DA+ + D Sbjct: 78 SFGAVSTVGGVLALALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQVDALYMLKTDP 137 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 + L+ PR+ A + LP+L IL+ + + G ++ YDI VF + + ++ Sbjct: 138 ISYLVVPRVLACCLMLPILNILSLITGMAGGLLIANGLYDISVYVFLTSVRNFLEFWDLI 197 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 T IKA I ++ G + +G+ TT VV S+ V II+ + F Sbjct: 198 TSTIKAITFGGLIAVIGCSWGLTTSGGAKGVGQSTTTAVVTSLLAVFIINFFLSWIMFQ 256 >gi|301155764|emb|CBW15232.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Haemophilus parainfluenzae T3T1] Length = 261 Score = 228 bits (581), Expect = 2e-57, Method: Composition-based stats. Identities = 75/267 (28%), Positives = 135/267 (50%), Gaps = 8/267 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 ++ +G+ ++KF +L G + + L++Q+Y +GV Sbjct: 2 IVDMISSLGRSVIKFFRALGRSGFML------FGALVGKP-QIRKHFPLLVKQLYALGVQ 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + +++L G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GS Sbjct: 55 SLLIILLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGS 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ ++ M +D +R +I+PR WA +I++P+L IL I G S+V Sbjct: 115 ALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPILAILFTAIGIWGGSLVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + + F+S + + + +I G IK+ F A A+ +A+ G+ S + + Sbjct: 175 VDWKGVDAGSFWSVMQNAVSWSYDILNGFIKSVFFAIAVVWIALFNGYDCIPTSEGISQA 234 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAIG 372 T VV + +V+ +D + F G Sbjct: 235 TTRTVVHASLVVLGLDFILTAIMFGAG 261 >gi|295691537|ref|YP_003595230.1| hypothetical protein Cseg_4204 [Caulobacter segnis ATCC 21756] gi|295433440|gb|ADG12612.1| protein of unknown function DUF140 [Caulobacter segnis ATCC 21756] Length = 269 Score = 227 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 73/254 (28%), Positives = 122/254 (48%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + + ++G V A++ F L+RQ +G +PVV L + Sbjct: 15 IQALGRSTLAAVRMVGAVGVFAARGTAAALSPPWFPGQLLRQFMAIGFFSLPVVGLTAVF 74 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TGA +A +F AE ++++ RE+G +L A+M+AGR +AI AEIG+M+ Sbjct: 75 TGAALALNIFTGGGRFNAEQVMPQIVALGITRELGPVLAALMLAGRVSAAIAAEIGAMRA 134 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+RT+ D R L+ PR+ A ++ LPLLT +A+ + G +V + D V+ Sbjct: 135 TEQIDAMRTLSTDPFRYLVGPRLLAGVLMLPLLTAVADTIGVAGGWLVATRVLDFSPTVY 194 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 +I +GLIKA + ++ G+ + +G+ T VV S ++ Sbjct: 195 IRNTIDFLESWDIVSGLIKAAVFGFIVALMGCYHGYNASGGARGVGRATTHAVVSSAILI 254 Query: 358 IIIDSLFAIFYFAI 371 D L F+ + Sbjct: 255 FASDYLLTTFFTHM 268 >gi|145588286|ref|YP_001154883.1| hypothetical protein Pnuc_0097 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145046692|gb|ABP33319.1| protein of unknown function DUF140 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 265 Score = 227 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 68/265 (25%), Positives = 128/265 (48%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 +L +G I + + A + VI +G +I Q+ +VG Sbjct: 7 ILDLFGDLGFFIRRNLTSLGLAARMFTAVIWRSGFLLKRP-------RLVIDQILFVGNH 59 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 ++ + G V+ QG + L+++G+E L+++ RE+G ++TA++ AGR+G+ Sbjct: 60 SFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLTRELGPVITALLFAGRAGT 119 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 ++ AEIG MK E++ A+ M +D + +I+PR+WA IIS+P+L + ++G +V Sbjct: 120 SLTAEIGLMKAGEQLSAMEMMAVDPLGRVIAPRLWAGIISMPILATIFTAVGVLGGYLVG 179 Query: 287 WKYYDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + F+S+ ++I GLIK+ A+ +A+ +G+ + + Sbjct: 180 VPLIGVDSGAFWSQMQGGVDLFSDIGNGLIKSLVFGVAVTFIALYQGYEAKPTPEGVSQA 239 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV S V+ +D L F+ Sbjct: 240 TTRTVVISSLSVLALDFLLTAMMFS 264 >gi|219870961|ref|YP_002475336.1| resistance to organic solvents ABC transporter permease [Haemophilus parasuis SH0165] gi|219691165|gb|ACL32388.1| ABC-type transport system involved in resistance to organic solvents, permease component [Haemophilus parasuis SH0165] Length = 257 Score = 227 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 73/262 (27%), Positives = 132/262 (50%), Gaps = 7/262 (2%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 IG +++ I +L + + +F+ I+Q++ +GV + Sbjct: 2 EFISSIGASVIQAIRAMGRATFMLWGALVD-------KPEFRKHTPLFIKQLHVLGVQSL 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 +++L G V+ QG L F AE L+S+ LRE+G ++TA++ AGR+GSA+ Sbjct: 55 LIIMLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVSLSLLRELGPVVTALLFAGRAGSAL 114 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG MK E++ ++ M +D +R +I+PR WA II++P+L ++ I G S+V Sbjct: 115 TAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGIIAMPILAVIFTAIGIWGGSLVGVD 174 Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + + F+S ST T+ ++ G IK+ A A+ +A+ G+ S + + T Sbjct: 175 WKGVDVGSFWSVMQSTVTMGDLLNGFIKSIVFAFAVVWIALFNGYDALPTSEGISQATTR 234 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + +++ +D + F Sbjct: 235 TVVHASLVILGLDFILTAIMFG 256 >gi|156935718|ref|YP_001439634.1| hypothetical protein ESA_03587 [Cronobacter sakazakii ATCC BAA-894] gi|156533972|gb|ABU78798.1| hypothetical protein ESA_03587 [Cronobacter sakazakii ATCC BAA-894] Length = 260 Score = 227 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 76/265 (28%), Positives = 129/265 (48%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 NL +G++ +KF + G +F+ L+RQ+Y VGV Sbjct: 2 LLNLLASMGQRGLKF-------SASFGRAGLMLFNAIVGKPEFRKHGPLLVRQLYNVGVL 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++I+ G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GS Sbjct: 55 SMIIIIVSGLFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGS 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ ++ M +D +R +ISPR WA +ISLPLLT++ + G S+V Sbjct: 115 ALTAEIGLMKATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGVWGGSLVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + I F+S ++ LIK+ A + +A+ G+ S + + Sbjct: 175 VNWKGIDAGFFWSAMQDAVDWRMDLINCLIKSVVFAITVTWIALFNGYDAIPTSAGISRA 234 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + V+ +D + F Sbjct: 235 TTRTVVHASLAVLGLDFVLTALMFG 259 >gi|310766231|gb|ADP11181.1| ABC transporter, permease subunit, probable toluene tolerance protein [Erwinia sp. Ejp617] Length = 235 Score = 227 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 68/233 (29%), Positives = 120/233 (51%), Gaps = 1/233 (0%) Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198 +F+ L++Q+Y +GV + +V++ G V+ QG L +GAE Sbjct: 2 LFHALFGIPRFRKHAPLLVKQLYNIGVLSLLIVVVSGLFIGMVLGLQGYLILKTYGAEAS 61 Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258 ++++ LRE+G +++A++ AGR+GSA+ AEIG MK E++ ++ M +D +R +ISP Sbjct: 62 LGMMVALSLLRELGPVVSALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRIISP 121 Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKA 317 R WA IS+PLLT++ I+G ++V + I F+S + L +I IK+ Sbjct: 122 RFWAGFISMPLLTLIFVAVGILGGALVGVSWKGIDSGFFWSAMQNAVDLQTDIINCTIKS 181 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 A + +A+ G+ S + + T VV + V+ +D + F Sbjct: 182 AVFAVTVTWIALFNGYDAIPTSEGISRATTRTVVHASLAVLGLDFVLTALMFG 234 >gi|226939556|ref|YP_002794629.1| ABC transport system permease protein [Laribacter hongkongensis HLHK9] gi|226714482|gb|ACO73620.1| putative ABC transport system permease protein [Laribacter hongkongensis HLHK9] Length = 371 Score = 227 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 93/363 (25%), Positives = 169/363 (46%), Gaps = 16/363 (4%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK---Y 65 R G + + I + + A+ Q+ +D SA+T++D+ G L+ + Sbjct: 16 LRLEGPLTTHSVGSIWAEALAALAAQPQT-PLTLDASAVTQLDSAGLVLLHRLLHDPRPA 74 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 + L G++ + L I + IG + ++ Sbjct: 75 SAPVALSGLAAEYQPLLERIRTASLT---------PPASPPPLSPVERIGAATLSGLHTG 125 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 G S + +G ++ M G +P+V+LI F+ G ++A Q Sbjct: 126 RDSVVWTGASASALWRALCRPARLEG--ARVLDIMASAGTQALPIVLLIGFLMGTILAFQ 183 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 FGA + ++ + I LRE+G L+TA++ AGRSG+A AE+G+ K+NEEI A+ Sbjct: 184 MGLVAQGFGAGLLVVNGIGIAMLRELGPLMTAIVFAGRSGAAFAAELGTQKVNEEIYALH 243 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 T G+D V L+ PR+ A ++ LPLLT+LA+ ++G ++V+ + + F+ + +T Sbjct: 244 TFGIDPVAFLVLPRLVAAVLVLPLLTVLADVIGLLGGALVMQAF-SVTPMQFYHQTLATV 302 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 +L +++ GL K+ I + ++G + G ++G T VV S+ +++ID LFA Sbjct: 303 SLTDLYFGLGKSMVFGLFIAQIGCRQGLSAGQGPTAVGVAATRAVVSSLIWIVVIDGLFA 362 Query: 366 IFY 368 Sbjct: 363 ALL 365 >gi|293391911|ref|ZP_06636245.1| conserved ABC-type transport system protein, permease component [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952445|gb|EFE02564.1| conserved ABC-type transport system protein, permease component [Aggregatibacter actinomycetemcomitans D7S-1] Length = 261 Score = 227 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 76/265 (28%), Positives = 132/265 (49%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 NL +G+ + F +L G + LI+Q++ +GV Sbjct: 2 LTNLISALGRNAINFARAMGRAGFLL------FGALIGKP-QINKHFPLLIKQLHVLGVQ 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + +++L G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GS Sbjct: 55 SLLIIMLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGS 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ ++ M +D +R +I+ R WA +I++P+L+I+ I G S+V Sbjct: 115 ALTAEIGLMKATEQLSSLEMMAVDPLRRVIASRFWAGVIAMPILSIIFIAIGIWGGSLVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + + F+S S+ T + +I G IK+ F A A+ +A+ G+ S + K Sbjct: 175 VDWKGVDSGSFWSVMQSSVTWSHDILNGFIKSLFFAIAVVWIALFNGYDCIPTSEGISKA 234 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + +V+ +D + F Sbjct: 235 TTRTVVHASLVVLGLDFVLTTIMFG 259 >gi|327399719|ref|YP_004340588.1| hypothetical protein Hipma_1573 [Hippea maritima DSM 10411] gi|327182348|gb|AEA34529.1| protein of unknown function DUF140 [Hippea maritima DSM 10411] Length = 254 Score = 227 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 68/261 (26%), Positives = 111/261 (42%), Gaps = 8/261 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 + IG+ + F D + I E K QMY++GV Sbjct: 2 GIIAAIGRFTINFTRDMGGVFLLFISTIKALFE--------KPRFHLTAEQMYFIGVKST 53 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 +V L S G V Q +FGAE +++ RE+ +LTA+MI R+ SA+ Sbjct: 54 LIVALTSMFVGMVEVLQIYHGFHKFGAESMIGYTVAVSLGRELSPVLTALMIVARNVSAM 113 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AE+G+M++ ++IDA+ M ++ + L++PR+ A + LP L L+N IG +V Sbjct: 114 AAELGTMRVTQQIDALEVMAVNPINFLVAPRVIATTVMLPALVSLSNAIGNIGGYLVGIG 173 Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + + + ++ GLIKA I ++ G S +G T Sbjct: 174 VLGLNPTSYTKNIQVYIDMTDLTYGLIKAAVFGLIISLIGCYMGLTTKGGSRGVGISTTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYF 369 VV + V++ D F F Sbjct: 234 AVVAASISVLVADYFLTAFLF 254 >gi|323143323|ref|ZP_08078012.1| toluene tolerance protein Ttg2B [Succinatimonas hippei YIT 12066] gi|322416895|gb|EFY07540.1| toluene tolerance protein Ttg2B [Succinatimonas hippei YIT 12066] Length = 257 Score = 227 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 73/253 (28%), Positives = 124/253 (49%), Gaps = 1/253 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + + LG FK LI Q+Y+VGV V ++++ Sbjct: 5 ISSLGRYAIRKVTSLGRSTIMLYHALVGKPDFKKHFPLLISQIYFVGVQSVIIILVSGLF 64 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L F A L+++ +RE+G ++TA++ AGR+GSA+ AEIG +K Sbjct: 65 IGMVLGLQGFNILKDFMATGSLGTLVALAIIRELGPVVTALLYAGRAGSALTAEIGQLKA 124 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 +E++ ++ M +D +R +ISPR WA IS+PLL+I+ I G +V + + ++ Sbjct: 125 SEQLSSMEMMAVDPLRRIISPRFWAGAISMPLLSIMFCLVGIYGGKLVGVDWLGLDDGIY 184 Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S S+ L +I ++K+ A +A+ G+ S+ + T VVQS Sbjct: 185 WSGMQSSVDLVEDIGCMVVKSIVFAIVCTWIALFNGYDCTPTSSGISNATTATVVQSSLA 244 Query: 357 VIIIDSLFAIFYF 369 V+ +D + F Sbjct: 245 VLGLDFVLTALMF 257 >gi|120555619|ref|YP_959970.1| hypothetical protein Maqu_2708 [Marinobacter aquaeolei VT8] gi|120325468|gb|ABM19783.1| protein of unknown function DUF140 [Marinobacter aquaeolei VT8] Length = 260 Score = 227 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 64/255 (25%), Positives = 123/255 (48%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 +I + G A + L++Q+Y VGV + +V++ Sbjct: 4 RIAGLGRLGIAIIASFGRSGQFLFGVLAGVPRPATGFPLLVKQLYAVGVLSLAIVVVSGL 63 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG LS +G+E ++++ +RE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 64 FIGMVLGLQGYTILSDYGSESAIGQMIALTLVRELGPVVTALLFAGRAGSALTAEIGLMK 123 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ MG+D +R +++PR+WA +++P+L ++ + I G +V ++ + Sbjct: 124 ATEQLSSMEMMGVDPLRRVVAPRLWAGFLAMPVLAMIFSVVGIWGGMLVGVEWLGVFEGS 183 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+ S+ ++ G IK+ +A+ +G+ S + T VV S Sbjct: 184 FWGNMQSSVDFVDDVLNGFIKSVVFGFVCAWIAVYQGYDCVPTSAGISSATTKTVVYSSL 243 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 AVLGLDFVLTAVMFG 258 >gi|114328883|ref|YP_746040.1| ABC transporter permease [Granulibacter bethesdensis CGDNIH1] gi|114317057|gb|ABI63117.1| ABC transporter permease protein [Granulibacter bethesdensis CGDNIH1] Length = 259 Score = 227 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 125/264 (47%), Gaps = 7/264 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + +G+ + ++ + + FL +L+ +G Sbjct: 2 ILSPLAWLGRGFFSACASTGRMGVFG---LTALSHLLRPPFYGRMFLRALVE----IGYF 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PVV L + TG V+A Q ++F AE L+S+ RE+G +L +M+AGR G+ Sbjct: 55 SLPVVALTAIFTGMVLALQSYTGFARFSAESAIASLVSLSVTRELGPVLAGLMVAGRVGA 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AE+G+M++ ++IDA+ T+ ++ L++PR+ A I+LPLL I+A+ ++G +V Sbjct: 115 AMAAELGTMRVTDQIDALTTLSTHPMKYLVAPRLLAGTIALPLLVIIADILGVMGGWLVA 174 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + + ++ + ++ +GL KA I + G+ + +G Sbjct: 175 SIKLGFNSHTYLANTIASIHMDDVMSGLTKAAVFGFLIALQGCYHGYNSRGGAQGVGSAT 234 Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370 T+ VV + +++ D + +F+ Sbjct: 235 TSAVVTASVLILAFDYVLTELFFS 258 >gi|254253460|ref|ZP_04946778.1| ABC-type organic solvent resistance transport system permease protein [Burkholderia dolosa AUO158] gi|124896069|gb|EAY69949.1| ABC-type organic solvent resistance transport system permease protein [Burkholderia dolosa AUO158] Length = 255 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 130/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + + ++ + +Q++++G Sbjct: 1 MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D ++ +I+PR+WA II++PLL + N ++G V Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKNVIAPRMWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ S + ++ G++K+ A+ +A+ +G+ + + T Sbjct: 174 IGVDPGAFWSQMQSGVQVWADVGNGVLKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255 >gi|296104907|ref|YP_003615053.1| putative ABC transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059366|gb|ADF64104.1| putative ABC transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 260 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 75/255 (29%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++I+ Sbjct: 5 ALAALGHRGIKTIRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGL 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLTIL I G S+V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTILFVAVGIWGGSLVGVHWKGIDAGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S L ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 185 FWSAMQDAIDLRMDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|114776717|ref|ZP_01451760.1| hypothetical protein SPV1_10896 [Mariprofundus ferrooxydans PV-1] gi|114552803|gb|EAU55234.1| hypothetical protein SPV1_10896 [Mariprofundus ferrooxydans PV-1] Length = 266 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 73/265 (27%), Positives = 133/265 (50%), Gaps = 7/265 (2%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 ++ +G+ ++ I A +LG + F ++ K F+L Q+ +G Sbjct: 9 SATATFFGRLGRHALRGIEQIGD-ATMLG--LGALSLFFVRPWQGKHFVL----QLSALG 61 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V + ++I+ TG V+A QG + L++FG+E + + +RE+G +L A M+ GR+ Sbjct: 62 VGSLIIIIITGAFTGMVLALQGYYTLAKFGSESLLGAGVGMSIIRELGPVLGAFMVIGRA 121 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 GS+I AEIG M++ E+ DA+ M ++ + ++ PRI A I++PLL + + I I Sbjct: 122 GSSITAEIGIMRVTEQTDALEMMAINPKQRILLPRIVATTIAVPLLVSIFDVIGIGSGYI 181 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 V + + + + ST T+ +I+ G +KA IG++ G+ + + + Sbjct: 182 VGVELLGVNPGAYMAELVSTVTMHDIYGGWVKAVVFGFMIGMICTYMGYRSEPTTEGVAR 241 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYF 369 T VV S V+I+D + FY Sbjct: 242 ATTQAVVVSSVTVLILDYILTSFYL 266 >gi|301060804|ref|ZP_07201619.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300445201|gb|EFK09151.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 258 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 65/257 (25%), Positives = 125/257 (48%), Gaps = 4/257 (1%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + K + S +G + ++ + ++Q+ ++G + +++L Sbjct: 2 AVRKLGFSTLSYVRKMGAMGLFFLNTLFYTFVPPVKIYRCLKQIRFIGFQSLLLILLTGA 61 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 +G ++ QG + LS+FG++ F ++ + ++E+G ++ A+M+ GR+GSAI AEIG M+ Sbjct: 62 FSGMILGFQGFYSLSRFGSDAFLGPMVGLALIKELGPVIAALMVTGRAGSAITAEIGIMR 121 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 I+E+IDA+ MGL+ R L+ P + A +I LPLLT + + I G ++ + + Sbjct: 122 ISEQIDALELMGLNPYRYLVVPNLLAAVICLPLLTAIFDVVGIFGGYLIGGELLGVGAGT 181 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF----AVGVHSNSLGKKVTTCVVQ 352 +F + ++ G+ K+ I V +GF G S + K T VV Sbjct: 182 YFGEMAHYVEMKDVLEGIYKSFSFGVIIAWVCCFKGFYSGIYTGFGSEGVSKATTQAVVL 241 Query: 353 SISIVIIIDSLFAIFYF 369 S ++++ D F Sbjct: 242 SSVLILVWDYFMTSILF 258 >gi|162456584|ref|YP_001618951.1| putative ABC transport system permease protein [Sorangium cellulosum 'So ce 56'] gi|161167166|emb|CAN98471.1| putative ABC transport system permease protein [Sorangium cellulosum 'So ce 56'] Length = 266 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 66/252 (26%), Positives = 121/252 (48%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + + + +G +++ T + + + M ++G V +V L +G Sbjct: 15 RALEPVLAFLDNIGNIVTLTFQTIVWLVRPPFRPAQFLAAMDFMGAQSVFIVGLTGVFSG 74 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+ Q ++ L F AE L+++ RE+ + +A+M+ R+GSA+ AE+G+M++ E Sbjct: 75 MVVTLQTSYALRAFSAEGRVGGLVAVSLARELAPVFSAIMVTARAGSAMAAELGNMRVTE 134 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +IDAI TMG+ V+ L+SPR++A + LPLL IL + G+ +V + FF Sbjct: 135 QIDAIATMGVSPVQYLLSPRLFAATVMLPLLCILYTSVGMCGSYLVAVLWLGGDEGAFFQ 194 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 A +I GLIKA + ++ + GF + +G T VV+S V++ Sbjct: 195 SIRDFALPKDISMGLIKACVFGFIVSSISCRHGFYASGGARGVGVATTRAVVESCVTVLV 254 Query: 360 IDSLFAIFYFAI 371 + + + Sbjct: 255 TNYILTQLLLDM 266 >gi|78222485|ref|YP_384232.1| hypothetical protein Gmet_1271 [Geobacter metallireducens GS-15] gi|78193740|gb|ABB31507.1| protein of unknown function DUF140 [Geobacter metallireducens GS-15] Length = 255 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 72/262 (27%), Positives = 137/262 (52%), Gaps = 9/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + +GK+++ F I+G ++ + + +LS+ QM +G +P Sbjct: 1 MFERVGKRVIAF-------NEIVGEMVMLLCQTVWFFREAPRNILSIFTQMSIIGYETLP 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 + +++F G V+A Q +L ++G + ++ + +RE+G ++T+ ++AGR+GSA+ Sbjct: 54 MASVMAFFVGMVLALQTGAELQKYGTQNIIGGIVGLSMVRELGPVMTSFLVAGRAGSAMA 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK+ EEIDA++T+ ++ VR L PR+ A +I +P L I A+F I+G +++ + Sbjct: 114 AEIGVMKVYEEIDALKTLDINPVRYLAMPRLIACLICVPALVIYADFVGILGGALLSHLH 173 Query: 290 --YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 I ++ ++ ++ L I GL+KA C IG+V+ GF + + + T Sbjct: 174 PKIFISYSTYYDSLNTALKLKEIGAGLLKATVFGCIIGVVSCYTGFKTTGGARGIAQSTT 233 Query: 348 TCVVQSISIVIIIDSLFAIFYF 369 VV S +++ D Sbjct: 234 RAVVLSFMLILAADYFLTRLLL 255 >gi|320353203|ref|YP_004194542.1| hypothetical protein Despr_1079 [Desulfobulbus propionicus DSM 2032] gi|320121705|gb|ADW17251.1| protein of unknown function DUF140 [Desulfobulbus propionicus DSM 2032] Length = 371 Score = 227 bits (579), Expect = 3e-57, Method: Composition-based stats. Identities = 97/374 (25%), Positives = 173/374 (46%), Gaps = 21/374 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S+ G W ++V A++ SI+ + + + E DT L+++ Sbjct: 12 SQPSRLTVHLQGAWTLRTDPPPPTELVGALDSSIR--TLAFLSTDLAEWDT---RLLVFL 66 Query: 62 MEKYHGK------IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIG 115 + L+G+ + +L +L K ++ N + L IG Sbjct: 67 KATTAAARNGGIAVDLEGLPPGVRRLLALSEAVPEKV--------TYGKNVRELLVTRIG 118 Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + A G +I A FK + GV +P+V LI+ Sbjct: 119 RLTLALSGQAREAAAFTGEIILACMALAAGKKPFK--WRDFFYFIQSCGVESLPIVSLIA 176 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 + G +++ GA QL FGA+I+ +L+ + + E+G L++ V+IAGR G+A A++G+M Sbjct: 177 VLVGVILSFVGAVQLQMFGAQIYVANLVGLGMVLEMGALMSGVIIAGRIGAAYAAQLGTM 236 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 ++NEEIDA+RTMG+ V L+ PR+ AL++ LPLL + A+ I+G S++ D+ Sbjct: 237 QVNEEIDALRTMGISPVGFLVLPRMLALMLMLPLLCVYADIMGILGGSVIGVTMLDLSLI 296 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + + T L G++KA IG G G + ++G+ T+ VV SI Sbjct: 297 EYLEQTRKTLRLGQCGQGILKASIFGVLIGYAGCLRGMQCGRSALAVGEATTSAVVTSIV 356 Query: 356 IVIIIDSLFAIFYF 369 ++++ DS+ + Sbjct: 357 LIVVSDSIITFLLY 370 >gi|220904331|ref|YP_002479643.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868630|gb|ACL48965.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 375 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 82/372 (22%), Positives = 158/372 (42%), Gaps = 13/372 (3%) Query: 6 ITVFRFA--GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + R + G+W + ++ + D+ ++ ++ Sbjct: 13 GPLLRVSVGGSWNIDRAWPPEARTALESLTDQSIREVRLESDNLGVWDSSLLVFLVQLVQ 72 Query: 64 KYHGKIKL--QGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + + + +E+L L K ++K + N +G+ + Sbjct: 73 TANERKANLHTSLPDGLERLLKLAFAVPAKAGSDRKKEE-------LNFVQRVGQVAIDL 125 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + +G V G + + L+ M GV +P++ + S + G + Sbjct: 126 PPRVTDFLNFVGDVTLAVGRLFVGRTQMRP--QDLLAAMQECGVQALPIISITSMLFGLI 183 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A GA QL+QFGA+I+ L+ I LR +G ++ V++AGR G+A A IG+M++NEE+ Sbjct: 184 LAFVGAVQLTQFGAQIYVAGLVGIGMLRVMGAVMVGVVMAGRVGAAYAALIGTMQVNEEV 243 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ T+G+ V L+ PR+ AL +PLLT+ A+ ++G IV +I + + Sbjct: 244 DALATLGIAPVDFLVLPRVVALTAMIPLLTLYADLMGVVGGYIVATTMLNINPMEYINAT 303 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 ++F GL I + +G G + ++G TT VV +I +I+ Sbjct: 304 MQMVPYKHVFIGLAYGTVFGVIIAMTGCYQGMRCGRSAQAVGLATTTAVVHAIVGIIVAT 363 Query: 362 SLFAIFYFAIGI 373 ++ + + I Sbjct: 364 AVITVICNVLDI 375 >gi|254489694|ref|ZP_05102890.1| conserved hypothetical protein [Methylophaga thiooxidans DMS010] gi|224465103|gb|EEF81356.1| conserved hypothetical protein [Methylophaga thiooxydans DMS010] Length = 260 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 69/265 (26%), Positives = 125/265 (47%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 NL +G+ + L ++ +++Q++ VGV Sbjct: 1 MINLIRSLGRWGLGTFERQGRAHLFLFNMLLGIPGLFLR-------FSLVVQQLFSVGVL 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++++ G V+ QG L FGAE L+S+ +RE+G +++A++ AGR+GS Sbjct: 54 SILIILISGLFVGMVLGLQGYNTLVDFGAEESLGVLVSLSLVRELGPVVSALLFAGRAGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ + M +D +R +I+PR A II++PLL + + I+G +V Sbjct: 114 ALTAEIGLMKSTEQLSGMEMMAVDPIRRIIAPRFLAGIIAMPLLAAIFSAVGILGGFLVG 173 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + F+S+ + L +I G+IK+ + +A+ EG S +G+ Sbjct: 174 HGLLGVDDGAFWSQMQAKTDLYDDILNGVIKSVVFGFVVTWIALFEGHDATPTSEGVGRA 233 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV S ++ +D + F Sbjct: 234 TTRTVVHSAFAILGLDFVLTALMFG 258 >gi|330888613|gb|EGH21274.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. mori str. 301020] Length = 230 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 63/219 (28%), Positives = 126/219 (57%), Gaps = 1/219 (0%) Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 L+RQ+Y VGV + ++++ G V+A QG L+++G+E ++++ LRE+G Sbjct: 10 FQLLVRQLYSVGVMSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELG 69 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 ++TA++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA IS+P+L + Sbjct: 70 PVVTALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAM 129 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKE 331 + + + GAS V + + F+S ++ + ++ G+IK+ A + +A+ + Sbjct: 130 IFSVVGVWGASWVAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQ 189 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+ S + + T VV + V+ +D + F Sbjct: 190 GYDCDPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 228 >gi|312795842|ref|YP_004028764.1| Toluene transport system permease [Burkholderia rhizoxinica HKI 454] gi|312167617|emb|CBW74620.1| Toluene transport system permease [Burkholderia rhizoxinica HKI 454] Length = 255 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 63/262 (24%), Positives = 134/262 (51%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + +G+ ++ ++ + A + + S ++I+Q++++G + Sbjct: 1 MIATVGRAVLDGLSRTGYGARMFARLASECFPLLRRP-------RTVIQQIHFLGNYSLV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYNTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D +R++++PR WA +I++P+L + + I+G +V Sbjct: 114 AEIGLMKAGEQLTAMEMMAVDPIRVVVAPRFWAGVIAMPILAAIFSAVGIVGGYVVGVVL 173 Query: 290 YDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ S L +I G+IK+ A+ VA+ +G+ + + T Sbjct: 174 IGVDPGAFWSQMQSGVDLRQDIGNGVIKSIVFGFAVTFVALFQGYEAKPTPEGVSRATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F Sbjct: 234 TVVFASLAVLGLDFLLTALMFN 255 >gi|167854684|ref|ZP_02477464.1| hypothetical protein HPS_01292 [Haemophilus parasuis 29755] gi|167854221|gb|EDS25455.1| hypothetical protein HPS_01292 [Haemophilus parasuis 29755] Length = 258 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 71/253 (28%), Positives = 125/253 (49%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I +G +F+ I+Q++ +GV + +++L Sbjct: 5 ISSIGASVIQAIRAMGRATFMLWGALVGKPEFRKHTPLFIKQLHVLGVQSLLIIMLSGLF 64 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L F AE L+S+ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 65 IGMVLGLQGYVVLVDFSAETSLGQLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 124 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +I+PR WA II++P+L ++ I G S+V + + F Sbjct: 125 TEQLSSLEMMAVDPLRRVIAPRFWAGIIAMPILAVIFTAIGIWGGSLVGVDWKGVDVGSF 184 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 +S ST T+ ++ G IK+ A A+ +A+ G+ S + + T VV + ++ Sbjct: 185 WSVMQSTVTMGDLLNGFIKSIVFAFAVVWIALFNGYDALPTSEGISQATTRTVVHASLVI 244 Query: 358 IIIDSLFAIFYFA 370 + +D + F Sbjct: 245 LGLDFILTAIMFG 257 >gi|261342639|ref|ZP_05970497.1| toluene tolerance ABC efflux transporter, permease [Enterobacter cancerogenus ATCC 35316] gi|288315287|gb|EFC54225.1| toluene tolerance ABC efflux transporter, permease [Enterobacter cancerogenus ATCC 35316] Length = 260 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 75/255 (29%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++I+ Sbjct: 5 ALAALGHRGIKTIRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMVIIIVSGL 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLTIL I G S+V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTILFVAVGIWGGSLVGVHWKGIDAGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S L ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 185 FWSAMQDAIDLRMDLINCLIKSLVFAVTVTWIALFNGYDAIPTSAGISRATTRTVVHSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|295097681|emb|CBK86771.1| conserved hypothetical integral membrane protein [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 260 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 74/255 (29%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++I+ Sbjct: 5 ALAGLGHRGLKTISTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGL 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLTIL I G ++V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTILFVAVGIWGGALVGVNWKGIDAGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S L ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 185 FWSAMQDAIDLRMDLVNCLIKSVVFAVTVTWIALFNGYDAIPTSAGISRATTRTVVHSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|87311113|ref|ZP_01093237.1| probable permease of ABC transporter [Blastopirellula marina DSM 3645] gi|87286204|gb|EAQ78114.1| probable permease of ABC transporter [Blastopirellula marina DSM 3645] Length = 280 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 75/255 (29%), Positives = 122/255 (47%), Gaps = 4/255 (1%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLL----SLIRQMYYVGVSGVPVV 171 + +I D + + + + F + ++ L +L+ Y VGV +PVV Sbjct: 6 EAFFNWIADWGTLGIEFTIAVGDMSLFALRTMQWLFNRLPKRETLVPNFYQVGVMSLPVV 65 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 L G V+A Q FQ Q G E ++++ +RE+G +L A M+AGR GSA+ AE Sbjct: 66 ALTGTFIGMVLAVQSYFQFRQLGLETRLGAVINMTLVRELGPVLAATMLAGRVGSAMAAE 125 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 +G+M++ E+IDA+ +MG + + L+ PR A +I +P LT++A+F +G Sbjct: 126 LGTMRVTEQIDALDSMGTNPIHYLVVPRFLACVILIPALTVMADFMGFVGGYFYSVNILG 185 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 I + +IF GLIK+ F I IV+ GF + +G+ T V Sbjct: 186 IDQHYYMYNSEQFVQSWDIFYGLIKSVFFGGTIAIVSCHRGFHCEAGAEGVGRAATAAFV 245 Query: 352 QSISIVIIIDSLFAI 366 S ++ ID I Sbjct: 246 YSFVFILAIDLALGI 260 >gi|152980680|ref|YP_001354988.1| ABC transport system permease protein [Janthinobacterium sp. Marseille] gi|151280757|gb|ABR89167.1| ABC transport system permease protein [Janthinobacterium sp. Marseille] Length = 258 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 61/262 (23%), Positives = 131/262 (50%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 L IG+ + +F+ + +I +G + Q++++G + Sbjct: 4 LLETIGRLVREFVVNIGFATRTFFGIIGASGGLLRR-------FRLVTSQIHFIGNYSLV 56 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ RE+G ++TA++ AGR+G+++ Sbjct: 57 LIAVSGLFVGFVLGLQGYYTLNKYGSEQALGLLVALSLTRELGPVVTALLFAGRAGTSLT 116 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M ++ ++ +++PR WA +I++P+L + + I+G IV + Sbjct: 117 AEIGLMKAGEQLSAMEMMAVNPLQRVLAPRFWAGVIAMPILAAIFSAVGILGGYIVGVQL 176 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + +I G+IK+ A+ +A+ +G+ + + T Sbjct: 177 IGVDEGAFWSQMQGGVDVWNDIVNGVIKSIVFGFAVTFIALYQGYEAQPTPEGVARATTR 236 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 237 TVVIASLSVLWLDFLLTALMFS 258 >gi|115350388|ref|YP_772227.1| hypothetical protein Bamb_0333 [Burkholderia ambifaria AMMD] gi|172059407|ref|YP_001807059.1| hypothetical protein BamMC406_0342 [Burkholderia ambifaria MC40-6] gi|115280376|gb|ABI85893.1| protein of unknown function DUF140 [Burkholderia ambifaria AMMD] gi|171991924|gb|ACB62843.1| protein of unknown function DUF140 [Burkholderia ambifaria MC40-6] Length = 255 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + + ++ + +Q++++G Sbjct: 1 MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D ++ +I+PR+WA II++PLL + N ++G V Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKTVIAPRLWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + ++ G+IK+ A+ +A+ +G+ + + T Sbjct: 174 IGVDPGAFWSQMQGGVQVWADVGNGVIKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255 >gi|83647976|ref|YP_436411.1| organis solvents resistance ABC transporter permease [Hahella chejuensis KCTC 2396] gi|83636019|gb|ABC31986.1| ABC-type transport system involved in resistance to organic solvents, permease component [Hahella chejuensis KCTC 2396] Length = 259 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 66/252 (26%), Positives = 128/252 (50%), Gaps = 2/252 (0%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + + LG + + KGF L L++Q+Y VGV + ++++ G Sbjct: 7 RLGRNGLLSLGALGRAGIFLVGSLLGAPRMKGFPL-LLKQLYSVGVLSLVIIVVSGLFIG 65 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+ QG L +G+E ++++ +RE+G ++TA++ AGR+GSA+ AEIG MK E Sbjct: 66 MVLGLQGYNILVDYGSEQAIGQMIALTLVRELGPVVTALLFAGRAGSALTAEIGLMKATE 125 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++ ++ MG+D +R +I+PR+ A I++P+L ++ + + G +V ++ + F+S Sbjct: 126 QLSSLEMMGVDPLRQIIAPRLLAGFIAMPMLAMIFSVVGVWGGKMVGVEWLGVYEGSFWS 185 Query: 300 RFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 ++ + +I G+IK+ +A+ +G+ S + T VV S V+ Sbjct: 186 NMQASVDFSDDILNGIIKSIVFGVVCTWIAVFQGYDSVPTSEGISSATTKTVVYSSLAVL 245 Query: 359 IIDSLFAIFYFA 370 +D + F Sbjct: 246 GLDFILTAVMFG 257 >gi|297621446|ref|YP_003709583.1| putative permease component of ABC transporter [Waddlia chondrophila WSU 86-1044] gi|297376747|gb|ADI38577.1| putative permease component of ABC transporter [Waddlia chondrophila WSU 86-1044] Length = 274 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 71/245 (28%), Positives = 124/245 (50%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 +N + LG ++K + QMY +GV +PVV + F TG V Sbjct: 13 LNILVNTLAALGDYFRLIALVIWEAFKNPPQAKLIRNQMYEIGVLSLPVVAITGFSTGMV 72 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A Q FQL+ G + +++ + E+G +LTA M+ GR G+++ AE+G+MK+ E+I Sbjct: 73 LAAQSFFQLADKGLASATGLMVAKAMMVELGPVLTAFMVTGRVGASMCAELGTMKVTEQI 132 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+++M ++ + LI+PR A + LPLLT+ + I G ++ +Y +P F Sbjct: 133 DALKSMTVNPLGYLIAPRFIAGTLMLPLLTVFSTVMGIGGGYMIAVWFYKMPSNTFLDPL 192 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 T + F+GL+KA I ++ +G + +G+ T VV S+++I + Sbjct: 193 PINITNFDFFSGLVKAISFGIVIVTISCYKGMTTRGGAAGVGRATTNSVVICYSVILIGN 252 Query: 362 SLFAI 366 L + Sbjct: 253 FLLTV 257 >gi|148261999|ref|YP_001236126.1| hypothetical protein Acry_3017 [Acidiphilium cryptum JF-5] gi|146403680|gb|ABQ32207.1| protein of unknown function DUF140 [Acidiphilium cryptum JF-5] Length = 362 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 96/367 (26%), Positives = 173/367 (47%), Gaps = 19/367 (5%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 V G + ++E + A+ ++ Q +DLS IDT GA L++ + Sbjct: 14 GPVIALTGPLTAAALTEAWPRAI-AVARAAQG-VMTLDLSRAARIDTSGAALLLALERGH 71 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 G+ + QG++ E L + + + P R+ + Sbjct: 72 DGETRWQGLTPAAEGLIARLRAALPETGAPPPPPRTVRGPGP--------------LRTL 117 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + G I T A +G + R G +P+VI++ F+ G ++A Q Sbjct: 118 GVRIAFFGETILATTGLPARRRFLRG--GNFFRIAERAGAQALPLVIMLGFLIGMILAFQ 175 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A + QFGA+I+ L+S+ RE+G LL AV++AGR+GSA AE+G+M +NEE+ A+ Sbjct: 176 SAIPMRQFGADIYVAALVSLSLFRELGPLLAAVILAGRTGSAFAAELGTMMVNEEVAALT 235 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 TMG+D +L+ PR+ A ++ +P L + + S ++G V+ P + ++ Sbjct: 236 TMGIDPGTMLVIPRMAAAMLVMPALALGIDVSGVLGMGFVM-GILGFPPSAIVAQMQMAT 294 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + ++ GL+K+ A+G++ + G G ++G+ T+ VV I I++D LFA Sbjct: 295 SPHDVLLGLMKSVVFGAAVGLIGCRAGLTAGGGPRAVGEAATSAVVGGIVATILLDGLFA 354 Query: 366 IFYFAIG 372 + + +G Sbjct: 355 VILYRLG 361 >gi|283836259|ref|ZP_06356000.1| toluene tolerance ABC efflux transporter, permease [Citrobacter youngae ATCC 29220] gi|291067623|gb|EFE05732.1| toluene tolerance ABC efflux transporter, permease [Citrobacter youngae ATCC 29220] Length = 260 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ LIRQ+Y VGV + ++I+ Sbjct: 5 ALASLGHRGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLLIRQLYNVGVLSMLIIIVSGV 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLTI+ I G S+V + I Sbjct: 125 ATEQLSSLEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S + ++ LIK+ A + +A+ G+ S + + T VV + Sbjct: 185 FWSAMQNAVDWRLDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|115379773|ref|ZP_01466845.1| ABC-type transport system involved in resistance to organic solvents [Stigmatella aurantiaca DW4/3-1] gi|310821468|ref|YP_003953826.1| ABC transporter permease [Stigmatella aurantiaca DW4/3-1] gi|115363220|gb|EAU62383.1| ABC-type transport system involved in resistance to organic solvents [Stigmatella aurantiaca DW4/3-1] gi|309394540|gb|ADO71999.1| ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1] Length = 272 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 63/277 (22%), Positives = 129/277 (46%), Gaps = 11/277 (3%) Query: 91 KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFK 150 + + F + +N GK + ++D A++ V+ ++ + Sbjct: 4 ENADKAPKEPHFLIQAIENF----GKGTIAVVSDVGGVAYLGFQVLR---WAFKRPFRPQ 56 Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210 F Q+ +VGV + +V L TG V AQQ + + F AE +++ RE Sbjct: 57 IFFS----QLDFVGVGSIFIVALTGLFTGMVFAQQVSTAFALFDAESLVGPTVALTLSRE 112 Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 + + +A+M+ R+GS++ E+G+M++ E++DA+ TM ++ V+ L+ PR+ + +I P+L Sbjct: 113 LAPVFSALMVTMRAGSSMCTELGTMRVTEQVDALETMAVNPVQYLLVPRVLSGLIMGPVL 172 Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330 T+L S + GA ++ + F SR +++ G +K I ++ Sbjct: 173 TMLFFTSGMSGAYMISVFVQNTSAGTFISRTQQWMEPLDLYEGTLKGAVFGLTITLICCY 232 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 +G+ + +G+ T +V S + I+D + + Sbjct: 233 KGYNASGGAKGVGQATTEAMVSSALAIFILDFIIGVL 269 >gi|171322154|ref|ZP_02911012.1| protein of unknown function DUF140 [Burkholderia ambifaria MEX-5] gi|171092530|gb|EDT37852.1| protein of unknown function DUF140 [Burkholderia ambifaria MEX-5] Length = 255 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 60/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + + ++ + +Q++++G Sbjct: 1 MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D V+ +I+PR+WA II++PLL + N ++G V Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPVKTVIAPRLWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + ++ G+IK+ A+ +A+ +G+ + + T Sbjct: 174 IGVDPGAFWSQMQGGVQVWADVGNGVIKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255 >gi|157148765|ref|YP_001456084.1| hypothetical protein CKO_04597 [Citrobacter koseri ATCC BAA-895] gi|157085970|gb|ABV15648.1| hypothetical protein CKO_04597 [Citrobacter koseri ATCC BAA-895] Length = 260 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++I+ Sbjct: 5 ALAALGHRGIKTLRTFGRAGLMLFNAVIGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGV 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR+WA +ISLPLLTI+ I G S+V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRLWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 185 FWSAMQDAVDWRLDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|134294506|ref|YP_001118241.1| hypothetical protein Bcep1808_0394 [Burkholderia vietnamiensis G4] gi|134137663|gb|ABO53406.1| protein of unknown function DUF140 [Burkholderia vietnamiensis G4] Length = 255 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + + ++ + +Q++++G Sbjct: 1 MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D ++ +I+PR+WA II++PLL + N ++G V Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPLKTVIAPRLWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + ++ G+IK+ A+ +A+ +G+ + + T Sbjct: 174 IGVDPGAFWSQMQGGVEVWADVGNGVIKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255 >gi|320354123|ref|YP_004195462.1| hypothetical protein Despr_2023 [Desulfobulbus propionicus DSM 2032] gi|320122625|gb|ADW18171.1| protein of unknown function DUF140 [Desulfobulbus propionicus DSM 2032] Length = 272 Score = 226 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 80/266 (30%), Positives = 130/266 (48%), Gaps = 10/266 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 L IG+ + I + + + ++F+ LI+Q+ ++G + Sbjct: 11 LLRLIGRMGDQAIYTLTDLGRMGIFLFFSLLGLLKRPFRFR----ELIKQVGFIGAGSLT 66 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V+ + TG V+ QG + L +FGAE +S+ + E+G +LTA+M+AGR+GSA+ Sbjct: 67 VIFFTALSTGMVLGLQGYYSLHKFGAEGMLGSAVSLSLIMELGPVLTALMVAGRAGSAMC 126 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG M+I+E+IDA+ M +D R ISP++ A +IS+PLLT + I G + K Sbjct: 127 AEIGIMRISEQIDALECMAIDPFRYFISPKLLATLISVPLLTAFFDVIGITGGYLAGVKL 186 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV------GVHSNSLG 343 + FFS + T ++ G+IK+ A + + G+ V G + S+ Sbjct: 187 MGVNSGAFFSGMEQSVTNHDVRLGVIKSFVFALLVAWICTGRGYFVQTIRGAGFGAESVS 246 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYF 369 K T VV S V+I D L Sbjct: 247 KVTTQAVVMSSISVLIFDYLLTAVLL 272 >gi|46143493|ref|ZP_00135103.2| COG0767: ABC-type transport system involved in resistance to organic solvents, permease component [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208757|ref|YP_001053982.1| hypothetical protein APL_1291 [Actinobacillus pleuropneumoniae L20] gi|307248316|ref|ZP_07530341.1| hypothetical protein appser2_12940 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307257357|ref|ZP_07539127.1| hypothetical protein appser10_13550 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307259627|ref|ZP_07541351.1| hypothetical protein appser11_14250 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307261768|ref|ZP_07543434.1| hypothetical protein appser12_13270 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307263956|ref|ZP_07545559.1| hypothetical protein appser13_13640 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|126097549|gb|ABN74377.1| hypothetical protein APL_1291 [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|306855186|gb|EFM87364.1| hypothetical protein appser2_12940 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306864207|gb|EFM96120.1| hypothetical protein appser10_13550 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306866272|gb|EFM98136.1| hypothetical protein appser11_14250 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306868586|gb|EFN00397.1| hypothetical protein appser12_13270 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306870718|gb|EFN02459.1| hypothetical protein appser13_13640 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 234 Score = 226 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 70/234 (29%), Positives = 122/234 (52%), Gaps = 1/234 (0%) Query: 137 SNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE 196 G +F+ LI+Q+Y +GV + +++L G V+ QG L F AE Sbjct: 1 MLLGALIGKP-QFRKHTPLLIKQLYVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFAAE 59 Query: 197 IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILI 256 L+S+ LRE+G ++TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I Sbjct: 60 TSLGTLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRII 119 Query: 257 SPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316 +PR WA +IS+P+L + I G S+V + + F+S ++ +++ G IK Sbjct: 120 APRFWAGVISMPILAAIFTAIGIWGGSLVGVDWKGVDGGSFWSVMQNSVDWSDLINGFIK 179 Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + A A+ +A+ G+ S + + T VV + +V+ +D + F Sbjct: 180 SIIFAFAVVWIALFNGYDSVATSEGISQATTRTVVHASLVVLGLDFILTAIMFG 233 >gi|313891881|ref|ZP_07825486.1| conserved hypothetical protein [Dialister microaerophilus UPII 345-E] gi|313119875|gb|EFR43062.1| conserved hypothetical protein [Dialister microaerophilus UPII 345-E] Length = 253 Score = 226 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 74/260 (28%), Positives = 128/260 (49%), Gaps = 9/260 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 +IGK +K I +L + K L +Q +GV+ P Sbjct: 3 FLENIGKYSLKVIAQIGVTILLLIETLKKIN---------KIKLYETCKQCLLLGVNSFP 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +V L TG V + Q +L ++GAE + +++I RE+G +L V++AGR G+AI Sbjct: 54 IVFLTLLFTGMVFSAQIVGELVKYGAEFTAGSIVAIGLGRELGPVLCGVVLAGRVGAAIT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AE+G+M++ E+IDA+R M +D V L+ PR+ A +I LP+L + A + + G IV Sbjct: 114 AELGTMRVTEQIDALRCMAVDPVEYLVLPRVIACMIMLPILDVFAVTTGVGGGMIVASVT 173 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 +I +++ S ++++ G+IK F I + G + +GK T Sbjct: 174 GNISSHMYWDSITSFCVASDLYIGMIKTVFFGMIIALTGCDRGLTCETGAEGVGKATTQS 233 Query: 350 VVQSISIVIIIDSLFAIFYF 369 VV S+ ++ I++ + + F Sbjct: 234 VVYSMIMIFIVNYILSTILF 253 >gi|325519291|gb|EGC98730.1| hypothetical protein B1M_40153 [Burkholderia sp. TJI49] Length = 255 Score = 226 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + + ++ + +Q++++G Sbjct: 1 MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D ++ +I+PR+WA II++PLL + N ++G V Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKNVIAPRMWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + ++ G++K+ A+ +A+ +G+ + + T Sbjct: 174 IGVDPGAFWSQMQGGVEVWADVGNGVLKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255 >gi|170703432|ref|ZP_02894205.1| protein of unknown function DUF140 [Burkholderia ambifaria IOP40-10] gi|170131663|gb|EDT00218.1| protein of unknown function DUF140 [Burkholderia ambifaria IOP40-10] Length = 255 Score = 226 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + + ++ + +Q++++G Sbjct: 1 MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ +GR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFSGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D ++ +I+PR+WA II++PLL + N ++G V Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKTVIAPRLWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + ++ G+IK+ A+ +A+ +G+ + + T Sbjct: 174 IGVDPGAFWSQMQGGVQVWADVGNGVIKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255 >gi|187479775|ref|YP_787800.1| membrane protein [Bordetella avium 197N] gi|115424362|emb|CAJ50915.1| putative membrane protein [Bordetella avium 197N] Length = 262 Score = 226 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 60/267 (22%), Positives = 128/267 (47%), Gaps = 8/267 (2%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 ++ IG + I G +++ +G + +Q++++G Sbjct: 2 SALGRFITAIGAWVGDLIRSVGFFTRFFGAILARSGIIFRRP-------RLVSQQVHFIG 54 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 + ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+ Sbjct: 55 NYSLLIIAVSGLFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTALLFAGRA 114 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 G+++ AEIG MK E++ A+ M +D +R ++ PR W +I++P+L + + I+G + Sbjct: 115 GTSLTAEIGLMKAGEQLAAMEVMAVDPMRRVLVPRFWGGVIAMPILASVFSMVGILGGWV 174 Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 V + F+S+ + + ++ G+IK+ + +VA+ EG+ + Sbjct: 175 VGVVMIGVDTGAFWSQMQAGVDIWDDVLNGVIKSVVFGITVTLVALYEGWQARPTPEGVA 234 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370 + T VV V+ +D L F Sbjct: 235 RATTRTVVVGSLAVLALDFLLTALMFG 261 >gi|237730114|ref|ZP_04560595.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226908720|gb|EEH94638.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 260 Score = 226 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ LIRQ+Y VGV + ++I+ Sbjct: 5 ALASLGHRGIKTLRTFGRAGLMLFNAVVGKPEFRKHAPLLIRQLYNVGVLSMLIIIVSGV 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLTI+ I G S+V + I Sbjct: 125 ATEQLSSLEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S + ++ LIK+ A + +A+ G+ S + + T VV + Sbjct: 185 FWSAMQNAVDWRLDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|220904015|ref|YP_002479327.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868314|gb|ACL48649.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 267 Score = 226 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 12/269 (4%) Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 + IG ++ I+ A + A + + ++Q+Y +G Sbjct: 6 APTAFLRRIGSPCLRAIDALGGTAIFF-------FDGLAQIFASRKIFPRTMQQLYIIGS 58 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 +++LI G V+ QG + L QFG+ +S+ +RE+G +LTA+M+ GR+G Sbjct: 59 KSFFLIMLIGVFCGMVLGLQGYYTLVQFGSVGMLGSAVSLTLIRELGPVLTAIMLTGRAG 118 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 S++ AEIG M+I ++IDA+ M ++ + L+SPR+ A +I+ PLLT + + IIG + Sbjct: 119 SSMTAEIGVMRITDQIDALDVMDINSMGYLVSPRLVASLIAFPLLTAVFDVIGIIGGYLT 178 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSN 340 I +F R S+ T+ ++ G IK+ + + ++G+ V Sbjct: 179 GVLMLGINEGAYFYRIASSVTMTDVAGGFIKSVVFGLLVTTICCRQGYYTNKRRDSVGPE 238 Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 ++G T+ VV S +++ D + F Sbjct: 239 AVGNATTSAVVISCVLILAADYVITSFLL 267 >gi|94498322|ref|ZP_01304881.1| ABC transporter, permease protein, putative [Sphingomonas sp. SKA58] gi|94422202|gb|EAT07244.1| ABC transporter, permease protein, putative [Sphingomonas sp. SKA58] Length = 303 Score = 226 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 94/301 (31%), Positives = 161/301 (53%), Gaps = 7/301 (2%) Query: 73 GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHIL 132 G +++L L+ + Q+ G++++ D+ Sbjct: 10 GEREDLQRLIDLV-----RPALEQESSGKAGVTGVLGFFERFGRQVIGTAGDAYQMLVFT 64 Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G +I G + + + + L+ M G++G+P+V +++F GAVIA G L+ Sbjct: 65 GQLIIALGRTLGNPRRLR--MTPLVAFMQDAGINGLPIVFIMTFFIGAVIALVGTNLLTT 122 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 G E+F+I L+ + LRE GV++TA++++GRS S+ A+IGSM++N+E DA++ MG+D Sbjct: 123 LGVEVFTIQLVGVAILREFGVVITAILLSGRSASSFAAQIGSMRMNQETDAMQVMGVDRF 182 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 L+ PRI A ++ +PL+T A+ + G +V W DI F R T + + + Sbjct: 183 DALVIPRILAALLMMPLMTFCADIGGLAGGLLVSWVTIDISPVFFIQRTLETVDIKHFWI 242 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 G+ KAPF+A I + G VG SLG+ VT+ VVQSI +VI+ D++FA+ + A+ Sbjct: 243 GMCKAPFLALIIAAAGCRHGLMVGGDVQSLGQNVTSAVVQSIFMVIMFDAIFAVIFMALD 302 Query: 373 I 373 + Sbjct: 303 L 303 >gi|82703861|ref|YP_413427.1| hypothetical protein Nmul_A2748 [Nitrosospira multiformis ATCC 25196] gi|82411926|gb|ABB76035.1| Protein of unknown function DUF140 [Nitrosospira multiformis ATCC 25196] Length = 265 Score = 226 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 68/267 (25%), Positives = 126/267 (47%), Gaps = 8/267 (2%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 +G +++ I + L + +G +IR++Y+ Sbjct: 2 PRRIVTGIQSVGHRVIDSIWRLGYASRFFLLTLIKSGTSLRR-------FTLVIRELYFT 54 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 GV + ++++ G V+ QG L ++GAE ++++ LRE+G +++A++ A R Sbjct: 55 GVQSLIIILVSGLFVGMVLGLQGFETLQRYGAESAVGTMVALSLLRELGPVVSALLFASR 114 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 +GSAI AEIG MK E++ A+ M +D + +++PR WA +IS+PLL L + I G Sbjct: 115 AGSAITAEIGLMKATEQLAAMEMMAVDPIARVVAPRFWAGVISMPLLAALFSAIGIYGGY 174 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 +V + F+S+ S ++ G+IK A+ +A+ EG+ + + Sbjct: 175 LVAVVLIGVDEGSFWSQMQSAVDFRYDVVNGIIKTCVFGIAVTAIAVFEGYDAAPTAEGV 234 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYF 369 T VV S ++ +D + F F Sbjct: 235 SGATTRTVVTSSLAILGLDFILTSFMF 261 >gi|241762837|ref|ZP_04760900.1| protein of unknown function DUF140 [Acidovorax delafieldii 2AN] gi|241368012|gb|EER62217.1| protein of unknown function DUF140 [Acidovorax delafieldii 2AN] Length = 260 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 60/260 (23%), Positives = 125/260 (48%), Gaps = 8/260 (3%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172 +G + + + D A + G ++ + Q++++G + ++ Sbjct: 8 DVGLAVRRQLADVGQAARLFGQLVRLFPAAVQRPGLVR-------DQVHFLGNYSLAIIA 60 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 + G V+A QG + L FG+ L+++ LRE+G ++TA++ AGR+G+++ AEI Sbjct: 61 VSGLFVGFVMALQGYYTLQDFGSTEALGQLVALSLLRELGPVITALLFAGRAGTSLTAEI 120 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 G M+ E++ A+ M +D VR ++ PR WA +I++P+L + + ++G +V + Sbjct: 121 GLMRAGEQLSAMEMMAVDPVRRILVPRFWAGVIAMPVLATVFSAVGVMGGWVVAVVMIGL 180 Query: 293 PFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 F+S+ +++ LIK+ + VA+ +G+ + + T VV Sbjct: 181 DGGAFWSQMQGGVDVFSDLGNSLIKSLVFGFTVTFVALLQGYTAKPTPEGVSRATTRTVV 240 Query: 352 QSISIVIIIDSLFAIFYFAI 371 + V+ +D + F+I Sbjct: 241 MASLAVLALDFVLTATMFSI 260 >gi|303230190|ref|ZP_07316958.1| putative membrane protein [Veillonella atypica ACS-134-V-Col7a] gi|302515116|gb|EFL57090.1| putative membrane protein [Veillonella atypica ACS-134-V-Col7a] Length = 253 Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats. Identities = 70/261 (26%), Positives = 127/261 (48%), Gaps = 9/261 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N IG+ ++ +++ + +L I A +++QM ++GV + Sbjct: 2 NWLETIGRNVMAGLSNVGTAMLLLWQTIKQLKMLNA---------WHVLQQMAHLGVDSL 52 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 P++ L G V+ Q L +GA+ LM++ RE+G +L V++AGR G+AI Sbjct: 53 PIISLTLLFAGGVMTLQITDVLITYGAQGTVGGLMAVAMGRELGPILVGVVLAGRVGAAI 112 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG+MK+ E+IDA+R M ++ + L+ PR+ A +I +P+L I G V Sbjct: 113 TAEIGTMKVTEQIDALRVMAVNPIGYLVVPRVVACMIMVPILAFYGVVIGIAGGYFVATT 172 Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + A + +T+++ GLIK+ I +V +G + + ++G T+ Sbjct: 173 IKGLAPATYLDSIQMFSTISDFTLGLIKSSVFGAVIALVGCYKGMHTKMGAEAVGFSTTS 232 Query: 349 CVVQSISIVIIIDSLFAIFYF 369 VV SI +V +++ + F Sbjct: 233 SVVTSIILVFVLNYFLSTLLF 253 >gi|322420104|ref|YP_004199327.1| hypothetical protein GM18_2600 [Geobacter sp. M18] gi|320126491|gb|ADW14051.1| protein of unknown function DUF140 [Geobacter sp. M18] Length = 258 Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats. Identities = 71/265 (26%), Positives = 130/265 (49%), Gaps = 9/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + +GK+++ F A ++G ++ E + S++ QM +G Sbjct: 1 MTQVFEPLGKRVLYFYQVMGEMAILMGKIVYFVREA-------PRNIPSILAQMAIIGWD 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PV +++F G V+A Q +L ++G + ++ +RE+G ++T+ ++AGR GS Sbjct: 54 TLPVASVMAFFVGMVLALQTGVELQKYGGQNIIGAIVGHSMVRELGPVMTSFLVAGRCGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AE+G M + EEIDA++T+ +D VR L PR A II +P L I A+ I G +++ Sbjct: 114 AMAAELGVMTVYEEIDALKTLDIDPVRYLAMPRFIACIICVPALVIYADLIGITGGALIS 173 Query: 287 WK--YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 + +A ++ + + I GL K+ I +V+ GFA + +G+ Sbjct: 174 NLHPQIFVSYATYYDSLTAALKMKEIGIGLTKSMVFGAIIALVSCYVGFATSGGARGIGQ 233 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYF 369 T VV S +++I D + Sbjct: 234 STTRSVVLSFMLILIADYVLTRLLM 258 >gi|253995674|ref|YP_003047738.1| hypothetical protein Mmol_0301 [Methylotenera mobilis JLW8] gi|253982353|gb|ACT47211.1| protein of unknown function DUF140 [Methylotenera mobilis JLW8] Length = 267 Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats. Identities = 72/269 (26%), Positives = 137/269 (50%), Gaps = 8/269 (2%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 N F +G +++ I + A + L I+ +GE +R++Y+ Sbjct: 6 INMFSRFLSGVGNRMIARIWRLGAGARLFMLAIAYSGESFRR-------FHLTLREVYFT 58 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 GV + ++I+ +F G V+A QG L ++G+ L+++ +RE+G ++TA++ AGR Sbjct: 59 GVMSLLIIIVSAFFVGMVLALQGYNTLQKYGSSEAIGVLVALALVRELGPVVTALLFAGR 118 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 +G+AI AEIG MK E++ A+ M ++ + +++PR WA +IS+P+L L + ++G Sbjct: 119 AGTAITAEIGLMKTTEQLSAMEMMAVNPIARVVAPRFWAGVISMPILAALFSMVGVLGGY 178 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 +V + F+S+ + + +I G+IK+ A ++A+ EGF + + Sbjct: 179 LVAVPLIGVDDGAFWSQMQANVDVRADIINGVIKSVVFGVACTMIALFEGFDAPPTAEGV 238 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 T VV S V+ +D + F + Sbjct: 239 SHATTRTVVISSLTVLFLDFVLTSFMLVV 267 >gi|302340503|ref|YP_003805709.1| protein of unknown function DUF140 [Spirochaeta smaragdinae DSM 11293] gi|301637688|gb|ADK83115.1| protein of unknown function DUF140 [Spirochaeta smaragdinae DSM 11293] Length = 253 Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats. Identities = 60/249 (24%), Positives = 118/249 (47%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 G + +++ ++ Q ++GV V ++ L S G + Sbjct: 3 RRLVRTFEQFGSFCLFALDSFRWTFRRPWRPGLVLEQAEHIGVDSVLIIALSSLSIGMIF 62 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + Q ++ F AE +++ RE+ + T++M+ ++GSA+ AEIG+M+++E+ID Sbjct: 63 SLQVTDLMAMFRAETMVGSAVAMTMGRELAPVFTSLMLVAKNGSAMAAEIGTMRVSEQID 122 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ TM ++ ++ L+ PRI II P+LT L+N ++G+ +V + A + + + Sbjct: 123 AMETMSVNPIQYLVVPRIIGSIIVFPILTALSNVVGVLGSYVVSIHMKGVDPAGYLDQLY 182 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 +I++G IKA M + ++ GF S +G T VV + V++ D Sbjct: 183 RFVDPVDIWSGFIKAAIMGALVSLICCFFGFTTSGGSKEVGTASTKAVVTASVAVLVSDY 242 Query: 363 LFAIFYFAI 371 + + I Sbjct: 243 IMSDIMLKI 251 >gi|149925791|ref|ZP_01914055.1| ABC-type transporter, permease component involved in toluene tolerance [Limnobacter sp. MED105] gi|149825908|gb|EDM85116.1| ABC-type transporter, permease component involved in toluene tolerance [Limnobacter sp. MED105] Length = 261 Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats. Identities = 65/263 (24%), Positives = 130/263 (49%), Gaps = 8/263 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 L +G ++ I A +G + + +I Q++++G + Sbjct: 6 LVSRLGAGVIATIAGLGVFARFVGNLFMLLPKALFRP-------RLVIDQIHFIGNYSLV 58 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++++ G V+ QG + L+++GAE L+++ +RE+G +++A++ AGR+G+++ Sbjct: 59 IIVVSGLFVGFVLGLQGYYTLNRYGAEQALGLLVALSLVRELGPVVSALLFAGRAGTSLT 118 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D +++PR A +ISLPLL L + I G +V Sbjct: 119 AEIGLMKAGEQLTAMEMMAVDPKARIVAPRWIAGLISLPLLAGLFSAVGIFGGYVVGVLL 178 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + + +I G+IK+ A+ +A+ +G+A + + T Sbjct: 179 IGVDSGAFWSQMQAGVDVRDDILNGVIKSVVFGVAVSSIALFQGYACQPTPEGVSRATTR 238 Query: 349 CVVQSISIVIIIDSLFAIFYFAI 371 VV S ++ +D + F+I Sbjct: 239 TVVISSLTILGLDFVLTALMFSI 261 >gi|317403202|gb|EFV83724.1| membrane protein [Achromobacter xylosoxidans C54] Length = 262 Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats. Identities = 62/263 (23%), Positives = 128/263 (48%), Gaps = 8/263 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G + I G +++ +G + + +Q++++G + Sbjct: 6 NAIGALGGWVRTRIAGVGFFTRFFGAMLARSGIALSRP-------RLVSQQIHFIGNYSL 58 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG + L+++GAE L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 59 LIIAVSGMFVGFVLGLQGYYTLNRYGAEESLGLLVALSLVRELGPVVTALLFAGRAGTSL 118 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG MK E++ A+ M +D +R ++ PR+W II++P+L + + I+G +V Sbjct: 119 TAEIGLMKAGEQLSAMEVMAVDPMRRVLVPRLWGGIIAMPILAAVFSMVGILGGWVVGVL 178 Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + F+S+ + ++ G+IK+ + +VA+ EG+ + + T Sbjct: 179 MIGVDAGAFWSQMQGGVDVWNDVVNGVIKSLVFGVTVTLVALYEGWQAKPTPEGVARATT 238 Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370 VV V+ +D L F Sbjct: 239 RTVVVGSLAVLGLDFLLTALMFG 261 >gi|119510442|ref|ZP_01629575.1| hypothetical protein N9414_01612 [Nodularia spumigena CCY9414] gi|119464864|gb|EAW45768.1| hypothetical protein N9414_01612 [Nodularia spumigena CCY9414] Length = 265 Score = 226 bits (576), Expect = 6e-57, Method: Composition-based stats. Identities = 72/255 (28%), Positives = 120/255 (47%), Gaps = 6/255 (2%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K + + A LG G+ + K + + QM VG + + +L + Sbjct: 7 KSSLGAWSQRLLAAIFLG------GQVIVHLLRGKINWRNTVEQMAAVGPGSLFIALLTA 60 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 GAV Q A + FGA ++++ RE+ +LTAV++AGR GSA AEIG+M Sbjct: 61 VFVGAVFTIQVAREFINFGAANLVGGVLAVALTRELSPVLTAVVLAGRVGSAFAAEIGTM 120 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 ++ E+IDA+ + D + L+ PR+ A + LP+LT+L+ + I+G I+ Y I Sbjct: 121 RVTEQIDALFILKTDPIDYLVIPRLLACCLMLPILTLLSLITGILGGLIIATSIYGIADT 180 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 VF + + +I + LIKA I ++ G + +G+ TT VV S+ Sbjct: 181 VFLDSARNLVGIWDIISALIKACCFGLLIAVIGCSWGLTTKGGAKGVGQSTTTAVVTSLL 240 Query: 356 IVIIIDSLFAIFYFA 370 I+ + + F Sbjct: 241 IIFTSNFFLSWLMFQ 255 >gi|161523498|ref|YP_001578510.1| hypothetical protein Bmul_0318 [Burkholderia multivorans ATCC 17616] gi|189351729|ref|YP_001947357.1| putative ABC transporter permease [Burkholderia multivorans ATCC 17616] gi|221201636|ref|ZP_03574674.1| toluene tolerance ABC transporter, permease protein [Burkholderia multivorans CGD2M] gi|221207289|ref|ZP_03580299.1| toluene tolerance ABC transporter, permease protein [Burkholderia multivorans CGD2] gi|221213427|ref|ZP_03586402.1| toluene tolerance ABC transporter, permease protein [Burkholderia multivorans CGD1] gi|160340927|gb|ABX14013.1| protein of unknown function DUF140 [Burkholderia multivorans ATCC 17616] gi|189335751|dbj|BAG44821.1| putative ABC transport system permease protein [Burkholderia multivorans ATCC 17616] gi|221166879|gb|EED99350.1| toluene tolerance ABC transporter, permease protein [Burkholderia multivorans CGD1] gi|221172877|gb|EEE05314.1| toluene tolerance ABC transporter, permease protein [Burkholderia multivorans CGD2] gi|221178452|gb|EEE10861.1| toluene tolerance ABC transporter, permease protein [Burkholderia multivorans CGD2M] Length = 255 Score = 226 bits (576), Expect = 6e-57, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + + ++ + +Q++++G Sbjct: 1 MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D ++ +I+PR+WA II++PLL + N ++G V Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKTVIAPRMWAGIITMPLLAAIFNAVGVLGGYFVGVVL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + ++ G++K+ A+ +A+ +G+ + + T Sbjct: 174 IGVDPGAFWSQMQGGVEVWADVGNGVLKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255 >gi|300724964|ref|YP_003714289.1| putative ABC transporter membrane protein [Xenorhabdus nematophila ATCC 19061] gi|297631506|emb|CBJ92213.1| putative transport protein (ABC superfamily, membrane) [Xenorhabdus nematophila ATCC 19061] Length = 262 Score = 225 bits (575), Expect = 6e-57, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 122/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + G + L L +Q+Y VGV + ++++ Sbjct: 6 RALAVLGRRAIEVTASFGRAGFMLFSAIIGKPEPAKQWLLLRQQLYSVGVQSLLIIVVSG 65 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L+ F AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 66 LFIGMVLALQGYLVLTTFSAEGSLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 125 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +++PR WA IS+PLLT++ I+G +IV + I Sbjct: 126 KATEQISSLEMMAVDPLRRVVAPRFWAGFISMPLLTLIFVAVGILGGAIVGVDWKGIDAG 185 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S S ++ +K+ A + +A+ G+ S + + T VV + Sbjct: 186 FFWSSMQSAVEWKKDLLNCFLKSVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHAS 245 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 246 LAVLGLDFVLTALMFG 261 >gi|161506125|ref|YP_001573237.1| hypothetical protein SARI_04313 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160867472|gb|ABX24095.1| hypothetical protein SARI_04313 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 260 Score = 225 bits (575), Expect = 6e-57, Method: Composition-based stats. Identities = 71/255 (27%), Positives = 121/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + G +F+ L+RQ+Y VGV + ++++ Sbjct: 5 ALASLGRSGIKTVRTFGRAGLMLFNAVIGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGV 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLTI+ I G S+V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S + ++ LIK+ A + +A+ G+ S + + T VV + Sbjct: 185 FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|329121164|ref|ZP_08249793.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Dialister micraerophilus DSM 19965] gi|327470327|gb|EGF15786.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Dialister micraerophilus DSM 19965] Length = 253 Score = 225 bits (575), Expect = 6e-57, Method: Composition-based stats. Identities = 74/260 (28%), Positives = 128/260 (49%), Gaps = 9/260 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 +IGK +K I + +L + K L +Q +GV+ P Sbjct: 3 FLENIGKYSLKVIAQIGATILLLIETLKKIN---------KIKLYETCKQCLLLGVNSFP 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +V L TG V + Q +L ++GAE + +++I RE+G +L V++AGR G+AI Sbjct: 54 IVFLTLLFTGMVFSAQIVGELVKYGAEFTAGSIVAIGLGRELGPVLCGVVLAGRVGAAIT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AE+G+M++ E+IDA+R M +D V L+ PR+ A +I LP+L + A + G IV Sbjct: 114 AELGTMRVTEQIDALRCMAVDPVEYLVLPRVIACMIMLPILDVFAVTIGVGGGMIVASVT 173 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 +I +++ S ++++ G+IK F I + G + +GK T Sbjct: 174 GNISSHMYWDSITSFCVASDLYIGMIKTVFFGMIIALTGCDRGITCETGAEGVGKATTQS 233 Query: 350 VVQSISIVIIIDSLFAIFYF 369 VV S+ ++ I++ + + F Sbjct: 234 VVYSMIMIFIVNYILSTILF 253 >gi|290476800|ref|YP_003469711.1| putative ABC transporter membrane protein [Xenorhabdus bovienii SS-2004] gi|289176144|emb|CBJ82949.1| putative transport protein (ABC superfamily, membrane) [Xenorhabdus bovienii SS-2004] Length = 262 Score = 225 bits (575), Expect = 7e-57, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 122/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + A G + L +Q+Y VGV + ++++ Sbjct: 6 RALAALGKRAIEVAASFGRAGFMLFSAIIGKPELAKQWKLLCQQLYSVGVQSLLIIVVSG 65 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V++ QG L+ F AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 66 LFIGMVLSLQGYLVLTTFSAEGSLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 125 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +I+PR WA IS+PLL+++ IIG +IV + I Sbjct: 126 KATEQISSLEMMAIDPLRRVIAPRFWAGFISMPLLSLIFVAVGIIGGAIVGVDWKGIDAG 185 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S S ++ +K+ A + +A+ G+ S + + T VV + Sbjct: 186 FFWSSMQSAVDWQKDLLNCFLKSVAFAITVTWIALFNGYDAIPTSEGISRATTRTVVHAS 245 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 246 LAVLGLDFVLTALMFG 261 >gi|325983137|ref|YP_004295539.1| hypothetical protein NAL212_2576 [Nitrosomonas sp. AL212] gi|325532656|gb|ADZ27377.1| protein of unknown function DUF140 [Nitrosomonas sp. AL212] Length = 265 Score = 225 bits (575), Expect = 7e-57, Method: Composition-based stats. Identities = 67/267 (25%), Positives = 130/267 (48%), Gaps = 8/267 (2%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 + IG ++++ I + LV+ +G +IR++Y+ Sbjct: 2 PKRIVSGIQSIGHRVIESIWRLGLASRFFILVLLKSGTSLRR-------FNLVIRELYFT 54 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 GV + ++++ G V+ QG L ++G+E L+++ +RE+G ++ A++ A R Sbjct: 55 GVLSLIIIVVSGLFVGMVLGLQGYETLQKYGSESAVGTLVALSLVRELGPVVAALLFASR 114 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 +GSAI AEIG MK E++ A+ M +D + +++PR WA +IS+P L + + + G Sbjct: 115 AGSAITAEIGLMKATEQLAAMGMMAVDPIARVVAPRFWAGVISMPFLAAMFSVMGVFGGY 174 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 +V + + ++S+ S +I G IK+ F A+ +A+ EG+ + + Sbjct: 175 LVTVIFIGVDEGSYWSQMQSAVDFRFDILNGFIKSCFFGVAVTAIAVFEGYDAPPTAEGV 234 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYF 369 T VV S +++ +D + F F Sbjct: 235 SGATTRTVVTSSLVILGLDFILTAFMF 261 >gi|218885955|ref|YP_002435276.1| hypothetical protein DvMF_0852 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756909|gb|ACL07808.1| protein of unknown function DUF140 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 267 Score = 225 bits (575), Expect = 7e-57, Method: Composition-based stats. Identities = 72/270 (26%), Positives = 133/270 (49%), Gaps = 12/270 (4%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 +G ++ + + + L + AS + ++ Q++ +G Sbjct: 5 PGILAPVTALGAATLRLLGEMGAMFLFLADGLRLI---FASPKQIPK----ILNQVFVIG 57 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 + V++LI TG V+ QG + L +FG+E +++ +RE+G +LTA+M+ GR+ Sbjct: 58 SKSLFVILLIGVFTGMVLGLQGYYTLVKFGSEGLLGAAVALSLIRELGPVLTAIMVTGRA 117 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 GS++ AEIG M+I ++IDA+ M ++ + L++PRI A +IS PLLT + + I+G + Sbjct: 118 GSSMAAEIGVMRITDQIDALDVMDINPMAYLVAPRIAASLISFPLLTAIFDVVGILGGYV 177 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHS 339 I V+F R ++ +A+I G +K+ A + V+ +G+ GV Sbjct: 178 TGVTLLGINEGVYFYRIQTSVEMADITGGFMKSVLFAVIVATVSCYQGYFTHMRRDGVGP 237 Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + T+ VV S V++ D + F Sbjct: 238 EGVSNSTTSAVVLSCVFVLVADYVLTSFLL 267 >gi|304413072|ref|ZP_07394545.1| permease component of phospholipid ABC transporter [Candidatus Regiella insecticola LSR1] gi|304283915|gb|EFL92308.1| permease component of phospholipid ABC transporter [Candidatus Regiella insecticola LSR1] Length = 260 Score = 225 bits (575), Expect = 7e-57, Method: Composition-based stats. Identities = 65/256 (25%), Positives = 120/256 (46%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K + + G + + L++Q++ +G + ++++ Sbjct: 4 KALASLGGKAIDVCTSFGRAGWMLFHALVGKPEPRKQWPLLVKQLHNLGTQSLSIIVVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLILMTYSAEASLGMMVALSLLRELGPVITALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +I+PR WA +IS+PLL + I+G +IV + I Sbjct: 124 KATEQLASLEMMAIDPLRRVIAPRFWAGVISMPLLMAIFIAVGIVGGAIVGVDWKGIDAG 183 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + ++ LIK+ A+ +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQNAIEWRVDLINSLIKSLVFTVAVTWIALFNGYDALPTSEGISQATTRTVVYSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTTLMFG 259 >gi|292490486|ref|YP_003525925.1| hypothetical protein Nhal_0342 [Nitrosococcus halophilus Nc4] gi|291579081|gb|ADE13538.1| protein of unknown function DUF140 [Nitrosococcus halophilus Nc4] Length = 260 Score = 225 bits (575), Expect = 7e-57, Method: Composition-based stats. Identities = 67/255 (26%), Positives = 117/255 (45%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 +++ LG LI QMY VGV +P++++ Sbjct: 4 ALLRLGRWGLGTFERLGRGHLFLARLLLGIAALLLRFPLLIAQMYSVGVLTLPIIVVSGA 63 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L FGAE ++S+ +RE+G +++A++ AGR+GSA+ AEIG MK Sbjct: 64 FVGMVLGLQGYNTLVDFGAEESLGVIVSLSLVRELGPVVSALLFAGRAGSALTAEIGLMK 123 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ + M +D +R + +PR +A S+PLL + + ++G V + Sbjct: 124 ATEQLSGMEMMAVDPMRRVAAPRFFAGCFSMPLLAAIFSAVGVLGGYFVGVGLLGVDEGA 183 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S+ + +I G+IK+ + +A+ EG+ S + + T VV S Sbjct: 184 FWSQMQANTDWEEDILNGVIKSLVFGLVVTWIAVFEGYDTAPTSEGVARATTRTVVHSAF 243 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 AVLALDFVLTALMFG 258 >gi|126668782|ref|ZP_01739730.1| ABC-type transport system involved in resistance to organic solvents, permease component [Marinobacter sp. ELB17] gi|126626765|gb|EAZ97414.1| ABC-type transport system involved in resistance to organic solvents, permease component [Marinobacter sp. ELB17] Length = 259 Score = 225 bits (575), Expect = 7e-57, Method: Composition-based stats. Identities = 67/255 (26%), Positives = 126/255 (49%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I + ++ G K L L++Q+Y VGV + +V++ Sbjct: 3 AIARLGKNTLDFLASFGRASQFLLGVLVGVPKPSVGLPLLLKQIYSVGVLSLVIVVVSGL 62 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG LS FG+E ++++ +RE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 63 FIGMVLGLQGYTILSDFGSESAIGQMIALTLVRELGPVVTALLFAGRAGSALTAEIGLMK 122 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ MG+D +R +I+PR+WA +S+P+L ++ + I+G +V ++ + Sbjct: 123 ATEQLSSMEMMGVDPLRRVIAPRLWAGFLSMPILALVFSMVGILGGMLVGVEWLGVFEGS 182 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+ ++ ++ G+IK+ +A+ +G+ S + T VV S Sbjct: 183 FWGNMQASVDFRDDVLNGVIKSVVFGFVCAWIAVYQGYDCVPTSAGISSATTKTVVYSSL 242 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 243 AVLGLDFILTAVMFG 257 >gi|308272145|emb|CBX28752.1| UPF0393 membrane protein RBE_1340 [uncultured Desulfobacterium sp.] Length = 288 Score = 225 bits (575), Expect = 7e-57, Method: Composition-based stats. Identities = 80/271 (29%), Positives = 136/271 (50%), Gaps = 12/271 (4%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 + N +GK I+ I + A + F + +++Q++++ Sbjct: 25 LSVLINPVTALGKWIIFVIQEMGRIAIFFSKSFYLM-------FSFPFQIKKILQQIHFI 77 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G V V+ L TG V+ QG L +FG+ F ++++ +RE+G +L A+M+ GR Sbjct: 78 GSKSVFVICLTGAFTGMVLGLQGYHTLVKFGSAGFLGAVVALSLIRELGPVLAAIMVTGR 137 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 +GSAI AE+G M+I+EEIDA+ TM ++ +R L+SP++ A +IS+PLLT L + IIG Sbjct: 138 AGSAIAAEVGIMRISEEIDALDTMDINPLRFLVSPKLAAALISMPLLTALFDVVGIIGGY 197 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVH 338 I I ++FSR ++ +A++ G IK+ A I V +G+ G Sbjct: 198 ISGSLLLGISGGIYFSRIETSVEMADVTGGFIKSLVFAAVIVTVCCFQGYYTHTRKEGFG 257 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + + T+ VV S ++I D + Sbjct: 258 AKGVSLSTTSAVVISCVTILITDYVLTSLLL 288 >gi|326405508|ref|YP_004285590.1| putative ABC transporter permease [Acidiphilium multivorum AIU301] gi|325052370|dbj|BAJ82708.1| putative ABC transporter permease protein [Acidiphilium multivorum AIU301] Length = 362 Score = 225 bits (575), Expect = 7e-57, Method: Composition-based stats. Identities = 98/367 (26%), Positives = 174/367 (47%), Gaps = 19/367 (5%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 V G + ++E + A+ ++ Q +DLS IDT GA L++ + Sbjct: 14 GPVIALTGPLTAAALTEAWPRAI-AVARAAQG-VMTLDLSRAARIDTSGAALLLALERGH 71 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 G+ + QG++ E L + + + P R+ + Sbjct: 72 DGETRWQGLTPAAEGLIARLRAALPETGAPPPPPRTVRGPGP--------------LRTL 117 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + G I T A +G + R G +P+VI++ F+ G ++A Q Sbjct: 118 GVRIAFFGETILATTGLPARRRFLRG--GNFFRIAERAGAQALPLVIMLGFLIGMILAFQ 175 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A + QFGA+I+ L+S+ RE+G LL AV++AGR+GSA AE+G+M +NEE+ A+ Sbjct: 176 SAIPMRQFGADIYVAALVSLSLFRELGPLLAAVILAGRTGSAFAAELGTMMVNEEVAALT 235 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 TMG+D +L+ PR+ A ++ +P L + + S ++G V+ P + ++ A Sbjct: 236 TMGIDPGTMLVIPRMAAAMLVMPALALGIDVSGVLGMGFVM-GILGFPPSAIVAQMQMAA 294 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + ++ GL+K+ A+G++ + G G ++G+ T+ VV I I+ID LFA Sbjct: 295 SPHDVLLGLMKSVVFGAAVGLIGCRAGLTAGGGPRAVGEAATSAVVGGIVATILIDGLFA 354 Query: 366 IFYFAIG 372 + + +G Sbjct: 355 VVLYRLG 361 >gi|297569270|ref|YP_003690614.1| protein of unknown function DUF140 [Desulfurivibrio alkaliphilus AHT2] gi|296925185|gb|ADH85995.1| protein of unknown function DUF140 [Desulfurivibrio alkaliphilus AHT2] Length = 264 Score = 225 bits (575), Expect = 7e-57, Method: Composition-based stats. Identities = 70/270 (25%), Positives = 128/270 (47%), Gaps = 13/270 (4%) Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 + +G++ + + D L ++ ++ L +IRQ+ +G Sbjct: 2 ALLANIERVGERTLYVVGDLGRMGGFLARALAG---LFKRPFR----LAEVIRQIRLIGA 54 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 + +PV+ + TG V+ QG + L +FGAE ++++ +RE+G +LTA+M+ GR+G Sbjct: 55 NSLPVIFFTAAFTGMVLGLQGYYTLRKFGAEGALGTMVALSLVRELGPVLTALMVIGRAG 114 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 SA+ AEIG M+ +E+IDA+ M +D R LI+P+ A +IS+PLLT++ N I G + Sbjct: 115 SAMCAEIGIMRNSEQIDALECMAVDPFRYLIAPKFLATVISIPLLTMIFNVVGIFGGYLA 174 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV------GVHS 339 + +F+ + +I G IK+ + + G+ V G + Sbjct: 175 GVVLLGVNAGSYFAAMEQSVLAQDINMGFIKSLVFGLLVVWICSGRGYFVHQIRGAGFGA 234 Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + T VV + V++ + L Sbjct: 235 EGVSCATTQAVVLASISVLLWNYLLTAILL 264 >gi|251791365|ref|YP_003006086.1| hypothetical protein Dd1591_3807 [Dickeya zeae Ech1591] gi|247539986|gb|ACT08607.1| protein of unknown function DUF140 [Dickeya zeae Ech1591] Length = 260 Score = 225 bits (574), Expect = 8e-57, Method: Composition-based stats. Identities = 63/256 (24%), Positives = 120/256 (46%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + G + L +Q+Y VGV + ++++ Sbjct: 4 QALASLGRVGIQVCAAFGRAGLMLFNALVGKPEPARQWPLLRKQLYSVGVQSLLIIMVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 VFIGMVLGLQGYLVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +++PR WA +I++PLLT++ I G ++V + I Sbjct: 124 KATEQLSSMEMMAVDPLRRVVAPRFWAGVITMPLLTVIFVAVGIWGGALVGVDWKGIDSG 183 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + ++ ++K+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQNAVAWQKDLLNCVLKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|325579009|ref|ZP_08148965.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Haemophilus parainfluenzae ATCC 33392] gi|325159244|gb|EGC71378.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Haemophilus parainfluenzae ATCC 33392] Length = 261 Score = 225 bits (574), Expect = 8e-57, Method: Composition-based stats. Identities = 72/267 (26%), Positives = 135/267 (50%), Gaps = 8/267 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 ++ +G+ ++KF +L G + + L++Q++ +GV Sbjct: 2 IVDMISSLGRSVIKFFRALGRSGFML------FGALVGKP-QVRKHFPLLVKQLHVLGVQ 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + +++L G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GS Sbjct: 55 SLLIILLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGS 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ ++ M +D +R +I+PR WA +I++P+L +L I G ++V Sbjct: 115 ALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGLIAMPILALLFTAIGIWGGALVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + + F+S + + + +I G IK+ F A A+ +A+ G+ S + + Sbjct: 175 VDWKGVDAGSFWSVMQNAVSWSYDILNGFIKSVFFAIAVVWIALFNGYDCIPTSEGISQA 234 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAIG 372 T VV + +V+ +D + F G Sbjct: 235 TTRTVVHASLVVLGLDFILTAIMFGAG 261 >gi|253991145|ref|YP_003042501.1| hypothetical protein PAU_03671 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782595|emb|CAQ85759.1| conserved hypothetical Protein [Photorhabdus asymbiotica] Length = 262 Score = 225 bits (574), Expect = 9e-57, Method: Composition-based stats. Identities = 68/265 (25%), Positives = 126/265 (47%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 +G++ ++ +L G + + L L +Q++ VGV Sbjct: 4 LTQALAALGRRAIEVFASFGRAGFML------FGAIIGRPEPARQWPL-LRQQLFSVGVQ 56 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++++ G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GS Sbjct: 57 SLLIIVVSGLFIGMVLGLQGYLVLTTYSAEASLGMMVAVSLLRELGPVVTALLFAGRAGS 116 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E+I ++ M +D +R +I+PR WA IS+PLL+++ I G ++V Sbjct: 117 ALTAEIGLMKATEQISSLEMMAIDPLRRVIAPRFWAGFISMPLLSLIFVAVGICGGAMVG 176 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + I F+S S ++ IK+ A + +A+ G+ S + + Sbjct: 177 VDWKGIDSGFFWSSMQSAIEWQKDLLNCFIKSVVFAITVTWIALFNGYDAIPTSEGISQA 236 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + V+ +D + F Sbjct: 237 TTRTVVHASLAVLGLDFVLTALMFG 261 >gi|237809666|ref|YP_002894106.1| hypothetical protein Tola_2931 [Tolumonas auensis DSM 9187] gi|237501927|gb|ACQ94520.1| protein of unknown function DUF140 [Tolumonas auensis DSM 9187] Length = 259 Score = 225 bits (574), Expect = 9e-57, Method: Composition-based stats. Identities = 73/253 (28%), Positives = 125/253 (49%), Gaps = 1/253 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + G + + + LI+Q+Y VGV V ++++ Sbjct: 6 ISRLGRRGIQSLTATGRAGIMLYQALVGRPEPRKHFPLLIQQLYVVGVESVLIILVSGLF 65 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L FGAE L+++ LRE+G +++A++ AGR+GSA+ AEIG MK Sbjct: 66 IGMVLGFQGYRVLVDFGAEASLGPLVALSLLRELGPVVSALLFAGRAGSALTAEIGLMKA 125 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R ++SPR WA ISLPLL+++ F IIG +V + F Sbjct: 126 TEQLSSLEMMAVDPLRRIVSPRFWAGAISLPLLSLIFCFIGIIGGKLVGVDWLGADEGGF 185 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S ++ +I G+IK+ A + VA+ G+ + + + T VV + + Sbjct: 186 WSAMQASVDWQEDIVQGIIKSVAFALVVTWVALFNGYDSLPTAAGISQATTRTVVHASLL 245 Query: 357 VIIIDSLFAIFYF 369 V+ +D + F Sbjct: 246 VLGLDFVMTAVMF 258 >gi|53803964|ref|YP_114401.1| hypothetical protein MCA1968 [Methylococcus capsulatus str. Bath] gi|53757725|gb|AAU92016.1| conserved hypothetical protein TIGR00056 [Methylococcus capsulatus str. Bath] Length = 263 Score = 225 bits (574), Expect = 9e-57, Method: Composition-based stats. Identities = 73/267 (27%), Positives = 124/267 (46%), Gaps = 8/267 (2%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 N +G+ + I + V++ A L LI QMY VG Sbjct: 2 NIVLKPFQLLGQSALVGIRKLGRAHLFILHVLTGLPGLVAR-------LDLLIVQMYSVG 54 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V + ++++ G V+ QG + LS FGAE +++ +RE+G ++TA++ AGR+ Sbjct: 55 VLSILLIMISGLFVGMVLGLQGYYVLSDFGAEESLGVMVAASLVRELGPVVTALLFAGRA 114 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 GSA+ AEIG MK E++ + M +D V+ +I+PR +A ++S+PLL L + ++G Sbjct: 115 GSALTAEIGLMKATEQLSGMEMMAVDPVKRIIAPRYFAGVVSMPLLAALFSIIGVLGGYF 174 Query: 285 VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 V + F S+ + +I G IK+ + +A+ EG+ S + Sbjct: 175 VGVGLLGVDEGAFRSQMQAKIDFDEDIVNGFIKSLVFGAVVTWIAVFEGYDATPTSEGVS 234 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370 + T VV S V+ D + F Sbjct: 235 RATTRSVVYSAFAVLGCDFVLTALMFG 261 >gi|148265726|ref|YP_001232432.1| hypothetical protein Gura_3706 [Geobacter uraniireducens Rf4] gi|146399226|gb|ABQ27859.1| protein of unknown function DUF140 [Geobacter uraniireducens Rf4] Length = 258 Score = 225 bits (574), Expect = 9e-57, Method: Composition-based stats. Identities = 73/265 (27%), Positives = 128/265 (48%), Gaps = 9/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + IGKK++ F +LG I E + S+ QM +G Sbjct: 1 MTGVFDRIGKKVILFHEIVGEMLILLGQTIYFFREA-------PRNIASIFAQMAIIGYE 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PV +++F G V+A Q +L ++G++ ++ +RE+G ++T+ ++AGR+GS Sbjct: 54 TLPVASVMAFFVGMVLALQTGVELQKYGSQNIIGAIVGHSMVRELGPVMTSFLVAGRAGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AE+G M + EEIDA++T+ ++ VR L PR A I+ LP L I ++F I G +I+ Sbjct: 114 AMAAELGVMTVYEEIDALKTLDINPVRYLAMPRFIACIVCLPALVIYSDFIGITGGAIIS 173 Query: 287 WKY--YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 + + ++ ++ + I GLIKA I +V+ GF + +G Sbjct: 174 NLHPKIFVSYSTYYDSLTAALKFHEIGIGLIKAFVFGAIIALVSCYIGFKTSGGARGIGI 233 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYF 369 T VV S ++++ D Sbjct: 234 STTRSVVLSFMLILVADYFLTRILM 258 >gi|92114341|ref|YP_574269.1| hypothetical protein Csal_2219 [Chromohalobacter salexigens DSM 3043] gi|91797431|gb|ABE59570.1| protein of unknown function DUF140 [Chromohalobacter salexigens DSM 3043] Length = 260 Score = 225 bits (574), Expect = 9e-57, Method: Composition-based stats. Identities = 66/256 (25%), Positives = 127/256 (49%), Gaps = 2/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 IV + LG + + + +RQM+++GV + +V++ Sbjct: 3 HHIVALGRGTLETVSALGRAVIFLVQAAWGVPS-REGWHLWLRQMHFIGVMSLAIVLVSG 61 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L FGAE ++++ LRE+ ++ A++ AGR+GSA+ AEIG M Sbjct: 62 LFIGMVLGLQGFTILVDFGAEDALGQMVALSLLRELAPVVAALLFAGRAGSALTAEIGLM 121 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D +R +++PR+WA +S+PLLT+ + I G +V ++ + Sbjct: 122 KATEQLTSMEMIGVDPLRRIVAPRLWAGFVSMPLLTVGFSVVGIWGGYLVGVQWLGVFDG 181 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 ++S S+ +I G++K+ + +A+ +G+ + S + + T VV S Sbjct: 182 SYWSNMQSSVAFVDDILNGMLKSVVFGLVVTWIAVFQGYDLVPTSEGISRATTRTVVYSS 241 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 242 LAVLGLDFVLTALMFG 257 >gi|309785522|ref|ZP_07680153.1| toluene tolerance protein Ttg2B [Shigella dysenteriae 1617] gi|308926642|gb|EFP72118.1| toluene tolerance protein Ttg2B [Shigella dysenteriae 1617] Length = 235 Score = 225 bits (574), Expect = 9e-57, Method: Composition-based stats. Identities = 70/233 (30%), Positives = 119/233 (51%), Gaps = 1/233 (0%) Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198 +F+ L+RQ+Y VGV + ++++ G V+ QG L+ + AE Sbjct: 2 LFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGVFIGMVLGLQGYLVLTTYSAETS 61 Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258 L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ E++ ++ M +D +R +ISP Sbjct: 62 LGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISP 121 Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKA 317 R WA +ISLPLLTI+ I G S+V + I F+S + ++ LIK+ Sbjct: 122 RFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDSGFFWSAMQNAVDWRMDLVNCLIKS 181 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 A + +++ G+ S + + T VV S V+ +D + F Sbjct: 182 VVFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 234 >gi|218961384|ref|YP_001741159.1| hypothetical protein CLOAM1090 [Candidatus Cloacamonas acidaminovorans] gi|167730041|emb|CAO80953.1| conserved hypothetical protein; putative membrane protein [Candidatus Cloacamonas acidaminovorans] Length = 263 Score = 225 bits (574), Expect = 9e-57, Method: Composition-based stats. Identities = 67/248 (27%), Positives = 117/248 (47%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N S + +G G+ + Q +G + +++L + TG V Sbjct: 14 NMSSNLFAGIGEYTIFVGKCLGKIPSLFKRYQEFLIQFKRIGFDSLFLILLTAAFTGLVT 73 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A Q +Q + L+ + E+ +LTA+++ G+ G++I AEIG+M+++E+ID Sbjct: 74 ALQAVYQSKGYVPVNLLSVLIGKSTMIELAPVLTALVLTGKVGASIAAEIGTMRVSEQID 133 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +M +D L PRI A +++ PL+T+ AN II A W Y I + FF+ Sbjct: 134 ALESMNIDPYEFLYMPRILAGVLAFPLVTVFANAVGIICAWYFSWLRYGIHYYTFFNNMR 193 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 S ++++ GL K+ I A G + +GK T+ VV S ++++D Sbjct: 194 SYFIPSDLWGGLAKSFVFGFIITSFACYHGDRCFGGAEGVGKATTSTVVYSSVAILVMDF 253 Query: 363 LFAIFYFA 370 + A F F Sbjct: 254 IVAWFLFG 261 >gi|149178242|ref|ZP_01856835.1| probable permease of ABC transporter [Planctomyces maris DSM 8797] gi|148842891|gb|EDL57261.1| probable permease of ABC transporter [Planctomyces maris DSM 8797] Length = 280 Score = 225 bits (574), Expect = 1e-56, Method: Composition-based stats. Identities = 64/257 (24%), Positives = 126/257 (49%), Gaps = 7/257 (2%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 L + +G+ ++ + ++ + + + L S MY++G+ +P Sbjct: 13 LIHGLGRGVINTVCLLGDLFLFGWEMLG----WIITRLPPRSNLWSC---MYHIGIQSIP 65 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V+++ G V+A Q Q E +++I + E+G +L A+M+AGR G+++ Sbjct: 66 VILITGGFIGMVLAVQSYDQFKLMHLENQIGAVIAISLVEELGPVLAAIMLAGRVGTSMS 125 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AE+G+M++ E+IDA+R +G D + L+ PR A + +PLLTI+A+ I+G + Sbjct: 126 AELGTMRVTEQIDALRALGADPIHYLVVPRFLACCLLIPLLTIVADAVGILGGWFFSTQI 185 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 + ++ ++ G+ K+ F AI +++ GF G + +GK T Sbjct: 186 LGVDSFYYWHYSEQFVYAYDVMGGIFKSFFFGAAISLISCHRGFHCGAGAEGVGKAATEA 245 Query: 350 VVQSISIVIIIDSLFAI 366 V S +++I+D L + Sbjct: 246 FVYSFIVIMILDFLLGV 262 >gi|270159893|ref|ZP_06188549.1| toluene tolerance protein Ttg2B [Legionella longbeachae D-4968] gi|289165353|ref|YP_003455491.1| toluene transporter subunit: membrane component of ABC superfamily [Legionella longbeachae NSW150] gi|269988232|gb|EEZ94487.1| toluene tolerance protein Ttg2B [Legionella longbeachae D-4968] gi|288858526|emb|CBJ12407.1| toluene transporter subunit: membrane component of ABC superfamily [Legionella longbeachae NSW150] Length = 260 Score = 225 bits (574), Expect = 1e-56, Method: Composition-based stats. Identities = 67/263 (25%), Positives = 124/263 (47%), Gaps = 8/263 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 IG + + + D S L L++ + Q+Y+VGV Sbjct: 3 EFITRIGSRGSRILQDLGSSGIFLFLMLF-------RKPDISKLWSLVRYQIYFVGVLSC 55 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++I+ + G V+ QG L +FGA L+++ RE+G +++A++ AGR+GSA+ Sbjct: 56 LIIIVSALFIGMVVGLQGYNTLQKFGASSQLGQLLALSISRELGPVISALLFAGRAGSAL 115 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG MK E++ ++ MG+D + +I PR A I+LPLL ++ + A+ G + Sbjct: 116 TAEIGLMKATEQLSSMDMMGVDPLGRVIYPRFLAGFIALPLLALIFSAVAVFGGYFIGVH 175 Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + F+S + ++ +G+IK+ A + +++ +GF + + + T Sbjct: 176 WLGVDAGSFWSNMQAAVDFRIDVLSGIIKSLVFAFVVTWISVFQGFECVPTAEGISQATT 235 Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370 VV S V+ +D L Sbjct: 236 KTVVYSSLAVLGLDFLLTAMMIG 258 >gi|311103421|ref|YP_003976274.1| toluene tolerance protein Ttg2B [Achromobacter xylosoxidans A8] gi|310758110|gb|ADP13559.1| toluene tolerance protein Ttg2B [Achromobacter xylosoxidans A8] Length = 262 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 60/263 (22%), Positives = 130/263 (49%), Gaps = 8/263 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G + ++ G +++ +G + + +Q++++G + Sbjct: 6 NAIGALGGWVRTRVSGIGYFTRFFGAMLARSGIALSRP-------RLVSQQVHFIGNYSL 58 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 59 LIIAVSGMFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTALLFAGRAGTSL 118 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG MK E++ A+ M +D +R ++ PR+W II++P+L + + I+G +V Sbjct: 119 TAEIGLMKAGEQLAAMEVMAVDPIRRVLVPRLWGGIIAMPILAAVFSMVGILGGWVVGVL 178 Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + F+S+ + + ++ G+IK+ + +VA+ EG+ + + T Sbjct: 179 LIGVDAGAFWSQMQNGVDVWKDVANGVIKSLVFGVTVTLVALYEGWQAKPTPEGVARATT 238 Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370 VV V+ +D L F Sbjct: 239 RTVVVGSLAVLGLDFLLTALMFG 261 >gi|330721190|gb|EGG99301.1| Uncharacterized ABC transporter2C permease component YrbE [gamma proteobacterium IMCC2047] Length = 225 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 66/223 (29%), Positives = 125/223 (56%), Gaps = 1/223 (0%) Query: 149 FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL 208 + L L++Q+Y VGV +P++I+ G V++ QG L +G+E ++S+ + Sbjct: 1 MRKGLPLLLKQLYAVGVLSLPIIIVSGLFIGMVMSLQGYSILVDYGSEQAVGQMVSLSLV 60 Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268 RE+G ++TA++ AGR+GS++ AEIG MK E+I ++ +G+D +R +++PR+ A I+LP Sbjct: 61 RELGPVVTALLFAGRAGSSLTAEIGLMKATEQITSLEMLGVDPLRYVMAPRLLAGFIALP 120 Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIV 327 LLT++ N I G ++V + + F++ + ++ G++K+ A + + Sbjct: 121 LLTLIFNVVGIWGGALVAVDWLGVYDGSFWANMQAATDFRTDVVNGMVKSIAFAFVVTWI 180 Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 A+ +G + S +G+ T VV S V+ +D + F Sbjct: 181 AVFQGHDLTPTSEGIGRATTKTVVYSSLAVLGLDFVLTAVMFG 223 >gi|257092255|ref|YP_003165896.1| hypothetical protein CAP2UW1_0620 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044779|gb|ACV33967.1| protein of unknown function DUF140 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 271 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 59/272 (21%), Positives = 133/272 (48%), Gaps = 8/272 (2%) Query: 99 QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158 +R + IG + + + +++ +G+ IR Sbjct: 3 KRESGPGPLLSTIASIGHHVTDALQRLGFASRFFVMLLLCSGQSFRRP-------NLTIR 55 Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 ++YY G + ++++ G V+ QG L ++G+ L+++ +RE+G ++ A+ Sbjct: 56 EIYYSGFQSLLIIMVSGLFIGMVLGMQGYETLQRYGSADALGILVALSLVRELGPVVAAL 115 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 + A R+GS+I AEIG MK E++ A+ M ++ + +++PR W +IS+PLL L + + Sbjct: 116 LFASRAGSSITAEIGLMKATEQLTAMDMMAVNPIARVVAPRFWGGVISMPLLAALFSATG 175 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 + G ++ + + F+S+ ++ +I++G++K+ A+ ++A+ EG+ Sbjct: 176 VFGGYLIGVVFIGVDDGAFWSQMQASVDFRYDIWSGIVKSFVFGVAVSLIAVFEGYDALP 235 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + + + + VV+S ++ +D + F F Sbjct: 236 TAEGVSSSIKSTVVKSALAILALDFVLTSFMF 267 >gi|124516678|gb|EAY58186.1| putative integral membrane protein [Leptospirillum rubarum] Length = 255 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 68/244 (27%), Positives = 127/244 (52%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 I G ++ T ++ + + Q+ VG PVV++ + TG V+A Q Sbjct: 12 IGLFSISGDLLITTVTALTGMFRPAFLWWNFLVQLVKVGADSTPVVLVTALFTGMVLALQ 71 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 +F AE ++S+ RE+G ++T +M++GRSGS++ AE+G+M++ E+IDA+ Sbjct: 72 AWIGFQKFNAEGMVGAVVSLSLTRELGPVITGLMVSGRSGSSMAAELGTMRVTEQIDALE 131 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 ++ + + L++PR +A +I+LPLLT++A+F I+G V +P V+ Sbjct: 132 SLAVSPLVYLVTPRFYAGLIALPLLTVMADFVGIVGGYFVAVNLLGLPSNVYVKGIARYV 191 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 L + ++GL+KA + I + G+ + +G+ VT VV S ++++D Sbjct: 192 NLHDFYSGLVKACIFGAVLSIFSCYMGYHARGGAAGVGQSVTKAVVSSSMAILVLDYFLT 251 Query: 366 IFYF 369 + F Sbjct: 252 AWLF 255 >gi|311277833|ref|YP_003940064.1| hypothetical protein Entcl_0502 [Enterobacter cloacae SCF1] gi|308747028|gb|ADO46780.1| protein of unknown function DUF140 [Enterobacter cloacae SCF1] Length = 260 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 72/255 (28%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++I+ Sbjct: 5 ALAALGHRGIKTTAAFGRAGLMLFNAVVGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGV 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLTI+ I G S+V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F++ + ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 185 FWTAMQNAVEWRMDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|312887098|ref|ZP_07746702.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM 18603] gi|311300410|gb|EFQ77475.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM 18603] Length = 256 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 130/255 (50%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + I D+ S G + TG F + + + + L+ Q Y +G P++ L F+ Sbjct: 1 MALIEDTRSFLDETGSMAKFTGHFFSHGLRPRFEVKELLGQCYTIGYKSFPLIGLTGFIM 60 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G V+ Q L +G + ++ I +REIG ++TA++ AG+ GS+I AE+GSMK+ Sbjct: 61 GLVLTMQLRPSLVSYGVQSELPVMVGIAIVREIGPVITALIFAGKIGSSIGAELGSMKVT 120 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 E+IDA+ G + + L++ R+ A + LP+LT+L + ++ GA I + FF Sbjct: 121 EQIDAMEVSGTNPYKYLVATRVLATTLMLPILTVLGDAISLFGAYIGVNLSSVTSLHFFF 180 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 ++ + + ++I + K F A+GI+ +GF + +G + VV S ++ Sbjct: 181 TQVFQSLSFSDILPAITKTFFFGFAVGIIGCYKGFNSSKGTQGVGVSANSAVVLSSVLIF 240 Query: 359 IIDSLFAIFYFAIGI 373 IID L F +G+ Sbjct: 241 IIDLLAVQFTNILGL 255 >gi|320322486|gb|EFW78579.1| putative ABC transport system permease protein [Pseudomonas syringae pv. glycinea str. B076] Length = 265 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 69/267 (25%), Positives = 138/267 (51%), Gaps = 8/267 (2%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 S + +G+ + + L + G +S L+RQ+Y VG Sbjct: 4 KSLMDRVRLLGRSAIDIVTVLGRSGLFLVNALLGRGGAGSS-------FQLLVRQLYSVG 56 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V + ++++ G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+ Sbjct: 57 VVSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRA 116 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA IS+P+L ++ + I GAS Sbjct: 117 GSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFSVVGIWGASW 176 Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 V + + F+S ++ + ++ G+IK+ A + +A+ +G+ S + Sbjct: 177 VAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCEPTSEGIS 236 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370 + T VV + V+ +D + F Sbjct: 237 RATTRTVVYASLAVLGLDFILTALMFG 263 >gi|91786696|ref|YP_547648.1| hypothetical protein Bpro_0794 [Polaromonas sp. JS666] gi|91695921|gb|ABE42750.1| protein of unknown function DUF140 [Polaromonas sp. JS666] Length = 264 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 132/264 (50%), Gaps = 8/264 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 + ++G + + A ++ +++ TG A + Q++++G + Sbjct: 8 RMLSNLGFGTRSQLAELGHAARLMSRLLALTGPALARFGLVR-------DQIFFLGNYSL 60 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG + L ++G+ L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 61 AIITVSGLFVGFVLGLQGYYTLQRYGSSEALGLLVALSLVRELGPVVTALLFAGRAGTSL 120 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG MK E++ A+ M +D VR +++PR W +I++PLL + + IIG +V Sbjct: 121 TAEIGLMKAGEQLSAMEMMAVDPVRRILAPRFWGGVIAMPLLAAVFSAVGIIGGWVVGVV 180 Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + F+S+ + + ++ G+IK+ + VA+ +GF + + T Sbjct: 181 MIGVDAGSFWSQMQAGVDVWRDVGNGVIKSFVFGVTVTFVALHQGFEAQPTPEGVSRATT 240 Query: 348 TCVVQSISIVIIIDSLFAIFYFAI 371 VV + V+ +D L + F++ Sbjct: 241 RTVVVASLAVLGLDFLLTAWMFSL 264 >gi|16762074|ref|NP_457691.1| hypothetical protein STY3491 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16766607|ref|NP_462222.1| transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29143563|ref|NP_806905.1| hypothetical protein t3229 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56415241|ref|YP_152316.1| hypothetical protein SPA3179 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62181820|ref|YP_218237.1| ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161616322|ref|YP_001590287.1| hypothetical protein SPAB_04130 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167552038|ref|ZP_02345791.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167994505|ref|ZP_02575596.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168231923|ref|ZP_02656981.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168238014|ref|ZP_02663072.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168243148|ref|ZP_02668080.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168262675|ref|ZP_02684648.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168463462|ref|ZP_02697379.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168819618|ref|ZP_02831618.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194443328|ref|YP_002042570.1| toluene ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194449369|ref|YP_002047341.1| toluene ABC transporter permease [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194470890|ref|ZP_03076874.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194737604|ref|YP_002116262.1| toluene ABC transporter permease [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197251770|ref|YP_002148237.1| toluene ABC transporter permease [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197262344|ref|ZP_03162418.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197364171|ref|YP_002143808.1| hypothetical protein SSPA2967 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|200388463|ref|ZP_03215075.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204931189|ref|ZP_03221983.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205354213|ref|YP_002228014.1| hypothetical protein SG3202 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858560|ref|YP_002245211.1| hypothetical protein SEN3145 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213163395|ref|ZP_03349105.1| hypothetical protein Salmoneentericaenterica_26575 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213420406|ref|ZP_03353472.1| hypothetical protein Salmonentericaenterica_22736 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213426645|ref|ZP_03359395.1| hypothetical protein SentesTyphi_14148 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213618602|ref|ZP_03372428.1| hypothetical protein SentesTyp_19883 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213646981|ref|ZP_03377034.1| hypothetical protein SentesTy_06536 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213857745|ref|ZP_03384716.1| hypothetical protein SentesT_21720 [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|224585109|ref|YP_002638908.1| hypothetical protein SPC_3382 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238910106|ref|ZP_04653943.1| hypothetical protein SentesTe_03070 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289825822|ref|ZP_06544990.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25319166|pir||AG0904 probable membrane protein STY3491 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16421869|gb|AAL22181.1| putative ABC superfamily transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16504377|emb|CAD07829.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29139198|gb|AAO70765.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56129498|gb|AAV79004.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62129453|gb|AAX67156.1| putative ABC superfamily (membr) transport protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161365686|gb|ABX69454.1| hypothetical protein SPAB_04130 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194401991|gb|ACF62213.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407673|gb|ACF67892.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194457254|gb|EDX46093.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194713106|gb|ACF92327.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195633368|gb|EDX51782.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197095648|emb|CAR61216.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197215473|gb|ACH52870.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197240599|gb|EDY23219.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289146|gb|EDY28515.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|199605561|gb|EDZ04106.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204319956|gb|EDZ05162.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205273994|emb|CAR39000.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205323252|gb|EDZ11091.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205327645|gb|EDZ14409.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205333943|gb|EDZ20707.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205337808|gb|EDZ24572.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343404|gb|EDZ30168.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205348318|gb|EDZ34949.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206710363|emb|CAR34721.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224469637|gb|ACN47467.1| hypothetical protein SPC_3382 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261248477|emb|CBG26314.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995511|gb|ACY90396.1| putative transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159861|emb|CBW19380.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914339|dbj|BAJ38313.1| toluene ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320087757|emb|CBY97521.1| UPF0393 inner membrane protein yrbE [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321225264|gb|EFX50323.1| Uncharacterized ABC transporter, permease component YrbE [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322615316|gb|EFY12237.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618325|gb|EFY15216.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622870|gb|EFY19714.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626808|gb|EFY23605.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631377|gb|EFY28137.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635356|gb|EFY32070.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643355|gb|EFY39919.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647073|gb|EFY43574.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648876|gb|EFY45321.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655068|gb|EFY51379.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657671|gb|EFY53939.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664167|gb|EFY60365.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667450|gb|EFY63612.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674698|gb|EFY70790.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675669|gb|EFY71742.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682305|gb|EFY78328.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684908|gb|EFY80906.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322716309|gb|EFZ07880.1| putative phospholipid ABC transporter permease protein mlaE [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323131672|gb|ADX19102.1| putative transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323195887|gb|EFZ81058.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199004|gb|EFZ84101.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204296|gb|EFZ89305.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207643|gb|EFZ92590.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211304|gb|EFZ96148.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214754|gb|EFZ99503.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221234|gb|EGA05660.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224025|gb|EGA08318.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230326|gb|EGA14445.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233302|gb|EGA17396.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239339|gb|EGA23389.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242410|gb|EGA26436.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246920|gb|EGA30886.1| toluene transporter subunit: membrane component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254147|gb|EGA37967.1| toluene transporter subunit: membrane component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255264|gb|EGA39041.1| toluene transporter subunit: membrane component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262727|gb|EGA46283.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264037|gb|EGA47545.1| toluene transporter subunit: membrane component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269423|gb|EGA52878.1| toluene transporter subunit: membrane component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326625062|gb|EGE31407.1| putative phospholipid ABC transporter permease protein mlaE [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326629335|gb|EGE35678.1| Putative membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 260 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 72/255 (28%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++I+ Sbjct: 5 ALAALGHSGIKTVRTFGRAGLMLFNAIIGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGV 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLTI+ I G S+V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S + ++ LIK+ A + +A+ G+ S + + T VV + Sbjct: 185 FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|15606674|ref|NP_214054.1| hypothetical protein aq_1530 [Aquifex aeolicus VF5] gi|2983906|gb|AAC07457.1| hypothetical protein aq_1530 [Aquifex aeolicus VF5] Length = 340 Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 101/366 (27%), Positives = 173/366 (47%), Gaps = 33/366 (9%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 V + G + I + I + +DLS + ++DT GA + +++ + Sbjct: 8 VLKVEGELTAENIKSL----------KIPKNIEKIDLSDLKKLDTFGATFLALLIKENNI 57 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 ++ +L L+ + + + + SF + + S Sbjct: 58 PLERVEGGEKHVELIKLVLDNLKLPKEIPEKKVSFS------------------LKNLFS 99 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 LGL + ++ ++ + +++ G+ V +++ +SF+ G VIA Q A Sbjct: 100 FPEFLGLFLIHSFKYIKQ-----FEFSAFFKELQTSGLGSVLILVSLSFLIGVVIAYQSA 154 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA IF +DL+ I RE+ LLT +++AGR S A +G KINEEIDA+R M Sbjct: 155 VQLRAFGAGIFIVDLVGISTFRELAPLLTGIILAGRVSSGYTANVGLRKINEEIDALRVM 214 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GL V +L+ PR+ A +I PLLT L+ + ++G +I+ + I FF + Sbjct: 215 GLSPVVLLVLPRVLASLIYTPLLTSLSAVAMLLGGAIIAQVFLGIGVEEFFKKLPEAVAK 274 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++F G +K PF AI + + GF SLG V VV IS++I++D++F+I Sbjct: 275 EDLFAGYVKTPFFGVAIALNGVYYGFLTDPKPESLGYSVMRSVVTGISVIILLDAVFSII 334 Query: 368 YFAIGI 373 + +GI Sbjct: 335 FLRLGI 340 >gi|322435258|ref|YP_004217470.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX9] gi|321162985|gb|ADW68690.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX9] Length = 259 Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 71/233 (30%), Positives = 123/233 (52%) Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198 G A+ + + + QM +GV +P+V+L F TG V+A Q A L QFG+ Sbjct: 24 AGRGVANLFSPPVYWDDIFTQMDSIGVGSLPIVVLTGFFTGCVLALQSATALKQFGSISL 83 Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258 + L+++ ++E+G +LT +M++GR+ S + +E+GSM + E+IDA+R +G D +R L++P Sbjct: 84 TGSLVALSMVKELGPVLTGLMVSGRNASGMASELGSMMVTEQIDAMRALGTDPIRKLVTP 143 Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318 RI A ++ L LTIL++ I G ++V + + + + + ++ GL K Sbjct: 144 RIIATVVMLFFLTILSDAVGIAGGALVSVTILGLNLSSYLHTSYQSLLYGDVVQGLTKPL 203 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 F A I V G + +GK T VV S +I++D L + + Sbjct: 204 FSAFIIATVGCFFGLKTKGGTQGVGKATTQAVVYSSVFIIVVDFLVSRLMIGL 256 >gi|224369296|ref|YP_002603460.1| ABC-type transporter involved in resistance to organic solvents, permease protein [Desulfobacterium autotrophicum HRM2] gi|223692013|gb|ACN15296.1| ABC-type transporter involved in resistance to organic solvents, permease protein [Desulfobacterium autotrophicum HRM2] Length = 269 Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 71/273 (26%), Positives = 128/273 (46%), Gaps = 13/273 (4%) Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162 N F +G + F+ L + ++ L +I +++ Sbjct: 4 KINEFTGRVGALGSNTLDFVQGIGRAWLFLSQ---GLFQLLIPPFQ----LSKIIEHIWF 56 Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 +G+ + V+IL TG V+ QG + L +FG+E +++ +RE+G +LTA+M+ Sbjct: 57 IGMKSMMVIILTGIFTGMVLGLQGYYTLVRFGSEGMLGSAVALTLIRELGPVLTAIMVTA 116 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 R+GSA+ AE+G M+I+++IDA+ TM ++ VR L +PRI A +IS PLLT L + I G Sbjct: 117 RAGSAMAAELGVMRISQQIDALDTMDINPVRYLFTPRIIAAVISFPLLTALFDVIGIFGG 176 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV------G 336 + I ++ R + + ++ G +K+ + + V G+ G Sbjct: 177 YLTGSLMLGINSGIYLFRVEESVLMTDVTGGFVKSLVFSLVVTTVCCSRGYFTHLHRGGG 236 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + + TT VV S +V++ D + Sbjct: 237 FGAKGVSFSTTTAVVNSCVLVLVCDYVITYLLL 269 >gi|255020159|ref|ZP_05292228.1| hypothetical protein ACA_0896 [Acidithiobacillus caldus ATCC 51756] gi|254970301|gb|EET27794.1| hypothetical protein ACA_0896 [Acidithiobacillus caldus ATCC 51756] Length = 260 Score = 224 bits (572), Expect = 2e-56, Method: Composition-based stats. Identities = 68/264 (25%), Positives = 133/264 (50%), Gaps = 8/264 (3%) Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167 +G+ + + + + + L + G + + +L RQ+Y GV Sbjct: 4 LEFIPELGRVVRESVPRLGAASRFL---LLGLGRVVHRHFSIQQWL----RQVYGFGVLS 56 Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 + ++++ +F TG V+ QG + L +FGA L+++ LRE+G +LTA++ AGR+GSA Sbjct: 57 LALMVVAAFFTGMVLGFQGYYALVRFGATSALGTLVALSLLRELGPVLTALLFAGRAGSA 116 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + AEI +MK E++ A+ M +D + ++SPR+WA + ++P+L ++ + I G ++ Sbjct: 117 LTAEIATMKATEQLSAMEMMAVDPLAWVVSPRLWAAVFTVPILCVIFDLVGIFGGYLIAV 176 Query: 288 KYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + F+S+ S + +I GL KA + +A +G++ + +G Sbjct: 177 PVLGVDSGTFWSQMQSNVSFRGDILNGLFKALCFGLVVAWIAAWQGYSAKPTAEGVGNAT 236 Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370 T VV + V+ +D + F+ Sbjct: 237 TRSVVAASLAVLGLDFILTALLFS 260 >gi|254411230|ref|ZP_05025007.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] gi|196181731|gb|EDX76718.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] Length = 261 Score = 224 bits (572), Expect = 2e-56, Method: Composition-based stats. Identities = 70/239 (29%), Positives = 118/239 (49%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 L I G+ K + + + QM VG + + ++ + GAV Q + Sbjct: 16 LLAAILLGGQVIVHLLGGKIYRRNTLEQMAVVGPDSLTIALITATFIGAVFTIQVTREFI 75 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 FGA ++++ RE+ +LTAV+IAGR GSA AEIG+M++ E+IDA+ + D Sbjct: 76 NFGATTAIGGVLALALSRELAPVLTAVVIAGRVGSAFAAEIGTMRVTEQIDALYMLKTDP 135 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 + L+ PR+ A I+ LPLLTIL+ + G ++ Y+IP +VF + + ++F Sbjct: 136 IDYLVIPRVIACILMLPLLTILSIILGMTGGVLIAVNLYNIPQSVFLDSARNFLGIWDLF 195 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 T +IKA I ++ G + +G+ TT VV ++ + I + + F Sbjct: 196 TAMIKAAVFGMLIAVIGCSWGLTTSGGAKGVGQSTTTAVVTALLAIFITNFFLSWLMFQ 254 >gi|149378023|ref|ZP_01895747.1| ABC-type transport system involved in resistance to organic solvents, permease component [Marinobacter algicola DG893] gi|149357678|gb|EDM46176.1| ABC-type transport system involved in resistance to organic solvents, permease component [Marinobacter algicola DG893] Length = 259 Score = 224 bits (572), Expect = 2e-56, Method: Composition-based stats. Identities = 67/255 (26%), Positives = 126/255 (49%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 ++ F S LG A + L++Q+Y VGV + ++++ Sbjct: 3 RLAAFGRLGMSVIASLGRSGRFLVGALAGVPRPSVGFPLLLKQLYSVGVLSLAIIVVSGL 62 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG LS +G+E ++++ +RE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 63 FIGMVLGLQGYTILSDYGSEAAIGQMIALTLVRELGPVVTALLFAGRAGSALTAEIGLMK 122 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ MG+D +R +I+PR+WA IS+P+L + + I G +V ++ + Sbjct: 123 ATEQLSSMEMMGVDPLRRVIAPRLWAGFISVPVLAAVFSVVGIWGGMLVGVEWLGVFEGS 182 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+ S+ + ++ G++K+ +A+ +G+ S + T VV S Sbjct: 183 FWGNMQSSVSFTADVLNGVVKSLVFGFVCTWIAVYQGYDCVPTSAGISAATTKTVVYSSL 242 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 243 AVLGLDFVLTAVMFG 257 >gi|46447386|ref|YP_008751.1| hypothetical protein pc1752 [Candidatus Protochlamydia amoebophila UWE25] gi|46401027|emb|CAF24476.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila UWE25] Length = 240 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 66/221 (29%), Positives = 120/221 (54%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 S + + + Q++ +GV +PVV + F TG V+A Q FQLS G + +++ Sbjct: 3 SLRRPPTWILIRDQLFDIGVMSLPVVAITGFSTGMVLAAQSFFQLSDKGLASATGLMVAK 62 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 L E+G +LTA M+ GR G+A+ AE+G+M++ E+IDA+RTM ++ + L++PR A +I Sbjct: 63 AMLVELGPVLTAFMVTGRVGAAMCAELGTMRVTEQIDAMRTMSVNPLGYLVAPRFLAGMI 122 Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325 +PLLT+ + I G ++ +Y +P + F + +G++KA I Sbjct: 123 MMPLLTVFSAIMGIFGGYLIAVYFYKMPASSFIDPLPLHINTFDFISGMVKAFVFGIIIV 182 Query: 326 IVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 ++ +G + +G+ T VV S+++II+ + + Sbjct: 183 TISCYKGMKTRGGAAGVGRSTTNSVVICYSVILIINFILTL 223 >gi|152972118|ref|YP_001337264.1| ABC transporter membrane protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206579237|ref|YP_002236394.1| hypothetical protein KPK_0517 [Klebsiella pneumoniae 342] gi|238896701|ref|YP_002921446.1| putative ABC transport system permease component [Klebsiella pneumoniae NTUH-K2044] gi|288933378|ref|YP_003437437.1| hypothetical protein Kvar_0495 [Klebsiella variicola At-22] gi|290511571|ref|ZP_06550940.1| ABC transporter, permease component YrbE [Klebsiella sp. 1_1_55] gi|329997630|ref|ZP_08302887.1| toluene tolerance protein Ttg2B [Klebsiella sp. MS 92-3] gi|150956967|gb|ABR78997.1| putative transport protein (ABC superfamily, membrane) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206568295|gb|ACI10071.1| putative membrane protein [Klebsiella pneumoniae 342] gi|238549028|dbj|BAH65379.1| putative ABC transport system permease component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|288888107|gb|ADC56425.1| protein of unknown function DUF140 [Klebsiella variicola At-22] gi|289776564|gb|EFD84563.1| ABC transporter, permease component YrbE [Klebsiella sp. 1_1_55] gi|328538940|gb|EGF64994.1| toluene tolerance protein Ttg2B [Klebsiella sp. MS 92-3] Length = 260 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++I+ Sbjct: 5 ALAALGHRGIKTTATFGRAGLMLFNAVVGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGL 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLTI+ I G ++V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGALVGVSWKGIDGGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F++ + ++ LIK+ A + +A+ G+ S + + T VV + Sbjct: 185 FWTAMQNAVDWRMDLVNCLIKSLVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|198242766|ref|YP_002217283.1| toluene ABC transporter permease [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197937282|gb|ACH74615.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] Length = 260 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 72/255 (28%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++I+ Sbjct: 5 ALAALGHSGIKTVRTFGRAGLMLFNAIIGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGV 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLTI+ I G S+V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S + ++ LIK+ A + +A+ G+ S + + T VV + Sbjct: 185 FWSVMQNAVDWRMDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|294634664|ref|ZP_06713197.1| toluene tolerance ABC efflux transporter, permease [Edwardsiella tarda ATCC 23685] gi|291091910|gb|EFE24471.1| toluene tolerance ABC efflux transporter, permease [Edwardsiella tarda ATCC 23685] Length = 260 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 68/255 (26%), Positives = 119/255 (46%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G + L RQ+Y VGV + ++++ Sbjct: 5 GLASLGRRGINVCAAFGRAGLMLFSALVGRPEPAKQWPLLRRQLYSVGVQSLLIIMVSGL 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 65 FIGMVLGLQGYLVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +++PR WA +IS+PLLT++ I G S+V + I Sbjct: 125 ATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLTVIFVAIGIWGGSVVGVDWKGIDAGF 184 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 185 FWSAMQGAVDYRTDLLNCLIKSLVFAITVMWIALFNGYDAIPTSAGISRATTRTVVHSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|160900967|ref|YP_001566549.1| hypothetical protein Daci_5535 [Delftia acidovorans SPH-1] gi|160366551|gb|ABX38164.1| protein of unknown function DUF140 [Delftia acidovorans SPH-1] Length = 260 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 59/261 (22%), Positives = 127/261 (48%), Gaps = 8/261 (3%) Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171 IG + + + + G +++ G + Q++++G + ++ Sbjct: 7 ARIGAAVRQQLTQLGMGTRLFGRLLALMGPALGRP-------RLIGDQIHFLGNYSLAII 59 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 + G V+ QG + L ++G+ L+++ +RE+G ++TA++ AGR+G+A+ AE Sbjct: 60 GVSGLFVGFVLGLQGYYTLQRYGSAEALGLLVALSLVRELGPVVTALLFAGRAGTALTAE 119 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 IG MK E++ A+ M +D VR +++PR A +I++PLL + + +IG +V Sbjct: 120 IGLMKAGEQLSAMEMMAVDPVRRILAPRFVAGLIAMPLLAAVFSAVGVIGGWLVGVVMIG 179 Query: 292 IPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 + F+ + + ++ G++K+ A+ +A+ +G+A + + T V Sbjct: 180 VDGGAFWGQMQNGVDWWYDLGNGVLKSLVFGVAVTFIALLQGYAAKPTPEGVSRATTRTV 239 Query: 351 VQSISIVIIIDSLFAIFYFAI 371 V + V+ +D L F++ Sbjct: 240 VMASLAVLGLDFLLTATMFSL 260 >gi|258645550|ref|ZP_05733019.1| toluene tolerance ABC efflux transporter, permease [Dialister invisus DSM 15470] gi|260402906|gb|EEW96453.1| toluene tolerance ABC efflux transporter, permease [Dialister invisus DSM 15470] Length = 253 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 69/249 (27%), Positives = 120/249 (48%), Gaps = 2/249 (0%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + + H LG VI C + I+Q +GV P+V L TG Sbjct: 7 LGSKTIGLFHQLGAVILLLNSSCKELNHLR--FRETIKQCLDLGVLSFPIVALTLLFTGM 64 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V++ Q A +L+++GA +++I RE+G +L V++AGR G+AI AEIG+M++ E+ Sbjct: 65 VLSVQIAGELTKYGAGFTVGAIVAIGMGRELGPVLCGVVLAGRVGAAITAEIGTMRVTEQ 124 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+R M + V L+ PR+ + + LP+LT+ + G IV + + VF Sbjct: 125 IDALRCMAVSPVGYLVLPRLLSCMAMLPILTVFGVSIGVFGGMIVASLTHGVSSYVFIHS 184 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 ++++ G++K+ + +V G + +G+ T VV SI ++ Sbjct: 185 IEVFCIPSDLYIGVMKSVVFGMIVALVGCDRGMTCEAGAEGVGRATTQSVVYSIIMIFAA 244 Query: 361 DSLFAIFYF 369 + L + F Sbjct: 245 NYLLSSILF 253 >gi|94969917|ref|YP_591965.1| hypothetical protein Acid345_2890 [Candidatus Koribacter versatilis Ellin345] gi|94551967|gb|ABF41891.1| protein of unknown function DUF140 [Candidatus Koribacter versatilis Ellin345] Length = 258 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 63/233 (27%), Positives = 117/233 (50%) Query: 137 SNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE 196 G + + +L ++Q +GV +P+VIL F TGA +A + L +FG+ Sbjct: 22 QLAGRSLTNLFSQPRYLSDTLQQADLIGVGSLPIVILAGFFTGAALALNTSATLQKFGSI 81 Query: 197 IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILI 256 + L+S +RE+G +LT +M+AGR+ S + +E+GSMK+ E+IDA+R +G D + L+ Sbjct: 82 TLTGQLVSYSMVRELGPVLTGLMVAGRNSSGMASELGSMKVTEQIDAMRALGTDPSKKLV 141 Query: 257 SPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316 +PR+ + ++ L L+I+++ + G I+ W + +++ + ++ GL+K Sbjct: 142 TPRVISTVVMLFFLSIISDLLGMAGGFIISWTLLGLDANQYWTTAYQALVFQDVLMGLVK 201 Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 I V G + +G+ T VV + ++I D F Sbjct: 202 PVVFGFFIASVGCYYGMNATGGTQGVGRATTQAVVTASVLIIASDLFITRFLM 254 >gi|225848307|ref|YP_002728470.1| toluene tolerance protein Ttg2B [Sulfurihydrogenibium azorense Az-Fu1] gi|225643396|gb|ACN98446.1| putative toluene tolerance protein Ttg2B [Sulfurihydrogenibium azorense Az-Fu1] Length = 247 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 68/235 (28%), Positives = 119/235 (50%) Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G + + +++K L +++ M +GV+ ++IL F TG V+ + + Sbjct: 11 GEITLFFIKTLIATFKRFPKLKHILKYMEDIGVNAALLIILTGFFTGGVLVVETYPTFHK 70 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 F AE L+S+ RE+ +L A+++ RSGSAI A IG+M+I E+IDA+ M ++ Sbjct: 71 FNAEYLMGALVSLSLARELSPVLVALLVTARSGSAIAANIGTMRITEQIDALEVMAVNPY 130 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 L+SPR+ A ++ +P LT+L+ S +IG Y I +++ + L +IF Sbjct: 131 SYLVSPRLIAAVVMVPALTVLSYVSGVIGGYFTSVYIYGINEYMYWEKLKDFTELKDIFG 190 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 GL KA + IV G+ + +G+ TT VV + +++I+D Sbjct: 191 GLYKAAVFGAVLTIVTSYFGYITKGGAEGVGRSTTTAVVVASVLILILDYFLTAL 245 >gi|170695754|ref|ZP_02886896.1| protein of unknown function DUF140 [Burkholderia graminis C4D1M] gi|170139359|gb|EDT07545.1| protein of unknown function DUF140 [Burkholderia graminis C4D1M] Length = 259 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 60/265 (22%), Positives = 130/265 (49%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 L +G+ ++ + + ++ + +Q+++VG Sbjct: 2 IGTLISSVGRVVLDGLGTAGYATRFFLRLLVEFFPLLRRP-------RLVTKQIHFVGNY 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+ Sbjct: 55 SLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGT 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 ++ AEIG MK E++ A+ M +D V+++++PR+WA IIS+P+L + + I G +V Sbjct: 115 SLTAEIGLMKAGEQLTAMEMMAVDPVKVVVAPRLWAGIISMPILAAIFSAVGIAGGYVVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + F+S+ + ++ G++K+ A+ VA+ +G+ + + Sbjct: 175 VLLIGVDAGAFWSQMQGGVDVWRDVGAGVVKSVVFGLAVTFVALFQGYEARPTPEGVSRA 234 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + V+ +D L F+ Sbjct: 235 TTKTVVYASLAVLGLDFLLTALMFS 259 >gi|290968738|ref|ZP_06560276.1| putative membrane protein [Megasphaera genomosp. type_1 str. 28L] gi|290781391|gb|EFD93981.1| putative membrane protein [Megasphaera genomosp. type_1 str. 28L] Length = 253 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 72/248 (29%), Positives = 115/248 (46%), Gaps = 2/248 (0%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 N S +G G K L I QM +GV +P+V L G V Sbjct: 8 GNRVLSLFSQVGAFTLLWGRTIRQLPNIKWHLT--IYQMAKLGVDSLPIVSLTLLFAGMV 65 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 + Q L ++GA+ MS+ RE+G +LT V++AGR G+A+ AEIG+MK+ E+I Sbjct: 66 MTLQIVDILLRYGAQSTLGGAMSVSMGRELGPILTGVVMAGRVGAAMTAEIGTMKVTEQI 125 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+R + ++ + L+ PR A ++ +PLL G V + + + Sbjct: 126 DALRCLAVNPIAYLVVPRFVACVLMVPLLAFYGYVIGTAGGYAVAVWGAGLAHFTYVNSI 185 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + +I GLIKA F I ++A EGF + +G+ T VV SI + I + Sbjct: 186 AVLTAVGDIVYGLIKAMFFGGIIAVIACYEGFHAESGAEGVGRATTKSVVTSIVFIFICN 245 Query: 362 SLFAIFYF 369 + ++ + Sbjct: 246 YILSVILY 253 >gi|258543490|ref|YP_003188923.1| ABC transporter permease [Acetobacter pasteurianus IFO 3283-01] gi|256634568|dbj|BAI00544.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-01] gi|256637626|dbj|BAI03595.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-03] gi|256640678|dbj|BAI06640.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-07] gi|256643735|dbj|BAI09690.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-22] gi|256646790|dbj|BAI12738.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-26] gi|256649843|dbj|BAI15784.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-32] gi|256652831|dbj|BAI18765.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655887|dbj|BAI21814.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-12] Length = 385 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 81/375 (21%), Positives = 158/375 (42%), Gaps = 16/375 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + +G+ G W A + +D + + D+ + Sbjct: 24 TADGVC-LNVEGAWTVQAGG--ATPFPQDKLPVEPGHTLHIDTTGLKGWDSAFVAFLWDV 80 Query: 62 ME---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + K Q + ++L +L+ + + + + + + +G Sbjct: 81 KQAASKAQLHFDEQNLPAPAQRLLALL--------PDAPAEPAQPPRNTEGIFARVGDAT 132 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 +K + ++ + + + + + + L+ ++ G + +V +++F+ Sbjct: 133 LKGLTETGTVSELALETAKGATQAVRGKSAMR--MKDLLLDIWNAGPDALLIVGIVNFLV 190 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA++A G +L +F AEI+ DL+ I REI ++TA+++AGR+G A A I +M N Sbjct: 191 GAILAFVGLVELRKFAAEIYVTDLVGIACAREISAIMTAIIMAGRTGGAYAARISTMLGN 250 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA++ G+ ++ P I +L + +PLL + AI G V D+ ++ Sbjct: 251 EEIDALQVFGIPISSYILLPSIVSLALMMPLLYLYGTIVAIFGGFAVSMSMMDVSPIGYW 310 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 L G IK+ F A I + A + G G + +G T VV I +I Sbjct: 311 ISTFDGVELKEFIFGFIKSFFFASFIALAACRVGLKAGRSAADVGVAATRAVVIGIVGII 370 Query: 359 IIDSLFAIFYFAIGI 373 +D++FA+ A+GI Sbjct: 371 AMDAIFAVIANALGI 385 >gi|56751145|ref|YP_171846.1| putative ABC transporter permease [Synechococcus elongatus PCC 6301] gi|81299189|ref|YP_399397.1| hypothetical protein Synpcc7942_0378 [Synechococcus elongatus PCC 7942] gi|56686104|dbj|BAD79326.1| putative ABC transporter permease protein [Synechococcus elongatus PCC 6301] gi|81168070|gb|ABB56410.1| Protein of unknown function DUF140 [Synechococcus elongatus PCC 7942] Length = 264 Score = 223 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 65/249 (26%), Positives = 116/249 (46%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 +N + L L + G+ ++ + + QM VG S + + +L GAV Sbjct: 6 LNGLKRWVNRLLLALLLAGQVVLHLFRARIDPYNTREQMANVGPSSLLITLLTGVSVGAV 65 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 Q A + FGA ++++ RE+ +LT V++AGR GSA AEIG+M++ E+I Sbjct: 66 FTIQVAREFINFGAGNIVGGILALALFRELAPVLTGVVVAGRIGSAFAAEIGTMQVTEQI 125 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ + D V L+ PR A + +P+L + + S+V Y IP +VFF Sbjct: 126 DALLMLRTDPVDYLVVPRTLACCLMMPILCLGFGLIGVTAGSLVAQSAYGIPVSVFFDGI 185 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + ++ + LIKA + + G + +G+ T VV ++ ++ ++D Sbjct: 186 RNFLEPWDVVSSLIKAVIFGWVVAAIGTNWGLTTTGGARGVGESTTGAVVTALLVIFVLD 245 Query: 362 SLFAIFYFA 370 + F+ Sbjct: 246 FFLSQLMFS 254 >gi|238025995|ref|YP_002910226.1| ABC transporter inner membrane subunit [Burkholderia glumae BGR1] gi|237875189|gb|ACR27522.1| ABC transporter, inner membrane subunit [Burkholderia glumae BGR1] Length = 255 Score = 223 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 60/262 (22%), Positives = 130/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + + ++ + +Q++++G Sbjct: 1 MISAIGRFVLGGLERTGYATRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++GAE L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGAEQSLGLLVALSLVRELGPVVTALLYAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D ++ +I+PR+WA II++PLL+ + +IG +V Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKTVIAPRMWAGIIAMPLLSAIFCAVGVIGGYVVGVIL 173 Query: 290 YDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ +++ G++K+ A+ VA+ +G+ + + T Sbjct: 174 IGVDPGAFWSQMQGGVDAWSDVGNGVLKSVVFGFAVTFVALYQGYEAKPTPEGVSRATTR 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVYASLAVLGLDFLLTALMFS 255 >gi|52841078|ref|YP_094877.1| toluene tolerance protein Ttg2B [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54293817|ref|YP_126232.1| hypothetical protein lpl0873 [Legionella pneumophila str. Lens] gi|54296863|ref|YP_123232.1| hypothetical protein lpp0904 [Legionella pneumophila str. Paris] gi|52628189|gb|AAU26930.1| toluene tolerance protein Ttg2B [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53750648|emb|CAH12055.1| hypothetical protein lpp0904 [Legionella pneumophila str. Paris] gi|53753649|emb|CAH15107.1| hypothetical protein lpl0873 [Legionella pneumophila str. Lens] gi|307609634|emb|CBW99138.1| hypothetical protein LPW_09231 [Legionella pneumophila 130b] Length = 260 Score = 223 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 65/265 (24%), Positives = 126/265 (47%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + +G + V+ + S L ++ + + L L Q+Y++GV Sbjct: 1 MLDTIARLGNRGVQALQGIGSSGLFLFSML------FRKPNVLRLWPL-LRYQLYFIGVL 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 ++++ + G V+ QG L +FGA L+++ RE+G +++A++ AGR+GS Sbjct: 54 SCLIIVVSALFIGMVVGLQGYNTLQKFGASSQLGQLLALSVARELGPVISALLFAGRAGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ ++ MG+D + ++ PR A I+LP+L ++ + AI G + Sbjct: 114 ALTAEIGLMKATEQLSSMDMMGVDPLGRVVYPRFVAGFIALPILALIFSAVAIYGGYFIG 173 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + + F+S + +I +G+IK+ A + +++ +GF + + Sbjct: 174 VYWLGVDAGSFWSNMQAAVNFRIDILSGIIKSLVFAFVVTWISVYQGFECVPTAEGISHA 233 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV S V+ +D L Sbjct: 234 TTKTVVYSSLAVLGLDFLLTAMMIG 258 >gi|119493784|ref|ZP_01624353.1| hypothetical protein L8106_03769 [Lyngbya sp. PCC 8106] gi|119452479|gb|EAW33666.1| hypothetical protein L8106_03769 [Lyngbya sp. PCC 8106] Length = 259 Score = 223 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 64/238 (26%), Positives = 115/238 (48%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 + G+ + K + + + QM VG + + ++ + G V Q + + Sbjct: 14 FVAALFLGGQVIVHLLQGKIYRRNTLEQMAAVGPESLLIALITAGFVGMVFTIQVSREFI 73 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 GA + ++++ RE+ +LTAV+I GR GSA AEIG+M++ E+IDA+ + D Sbjct: 74 TLGAGNLAGGVLALSLARELSPVLTAVIITGRVGSAFAAEIGTMQVTEQIDALYVLKTDP 133 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A + LPLL I+ + + G ++ Y+IP +F + TL ++ Sbjct: 134 VDYLVIPRVIACCLMLPLLNIICLMTGLAGGLLISSSLYNIPPNMFLESVQNFLTLWDLV 193 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 +G IKA I +++ G + +G+ TT VV + + I+D + F Sbjct: 194 SGEIKALIFGGTIAVISTNWGLTTTGGAKGVGQSTTTAVVTCLLSIFILDFFLSWSMF 251 >gi|302877779|ref|YP_003846343.1| hypothetical protein Galf_0536 [Gallionella capsiferriformans ES-2] gi|302580568|gb|ADL54579.1| protein of unknown function DUF140 [Gallionella capsiferriformans ES-2] Length = 262 Score = 223 bits (570), Expect = 3e-56, Method: Composition-based stats. Identities = 66/265 (24%), Positives = 126/265 (47%), Gaps = 8/265 (3%) Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 + IG +IV + A L + +G +I++++ GV Sbjct: 2 AVVKTISAIGHRIVDTVWRIGVAARFFFLTLLYSGNCLRR-------FHLVIKELFSTGV 54 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 + ++I+ G V+ QG L ++G+E ++++ +RE+G ++ A++ A R+G Sbjct: 55 MSLIIIIVAGLFVGMVLGLQGYETLKRYGSESALGVMVALGLVRELGPVMAALLFASRAG 114 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 SA+ AEIG MK E+I A+ M ++ + +++PR WA +IS+PLL L + I G +V Sbjct: 115 SAMTAEIGLMKATEQISAMEMMAVNPIARIVAPRFWAGVISMPLLAALFSAVGIFGGYLV 174 Query: 286 IWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 + F+S+ + +I G+IK+ + ++A+ EGF + + Sbjct: 175 GVVQIGVDEGSFWSQMQAAVDFREDIMNGIIKSVVFGTVVTVIALFEGFDAPPTAEGVSG 234 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYF 369 T VV S ++++D + F Sbjct: 235 ATTRTVVTSSLAILMLDFVLTAIMF 259 >gi|303230959|ref|ZP_07317702.1| putative membrane protein [Veillonella atypica ACS-049-V-Sch6] gi|302514341|gb|EFL56340.1| putative membrane protein [Veillonella atypica ACS-049-V-Sch6] Length = 253 Score = 223 bits (570), Expect = 3e-56, Method: Composition-based stats. Identities = 69/261 (26%), Positives = 127/261 (48%), Gaps = 9/261 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N IG+ ++ +++ + ++ I A +++QM ++GV + Sbjct: 2 NWLEVIGRNVIAGLSNVGTAMLLVWQTIKQLKMLNA---------WHVLQQMAHLGVDSL 52 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 P++ L G V+ Q L +GA+ LM++ RE+G +L V++AGR G+AI Sbjct: 53 PIISLTLLFAGGVMTLQITDVLITYGAQGTVGGLMAVAMGRELGPILVGVVLAGRVGAAI 112 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG+MK+ E+IDA+R M ++ + L+ PR+ A +I +P+L I G V Sbjct: 113 TAEIGTMKVTEQIDALRVMAVNPIGYLVVPRVVACMIMVPILAFYGVVIGIAGGYFVATA 172 Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + A + +T+++ GLIK+ I +V +G + + ++G T+ Sbjct: 173 IKGLAPATYLDSIQMFSTISDFTLGLIKSSVFGAVIALVGCYKGMHTKMGAEAVGFSTTS 232 Query: 349 CVVQSISIVIIIDSLFAIFYF 369 VV SI +V +++ + F Sbjct: 233 SVVTSIILVFVLNYFLSTLLF 253 >gi|197119107|ref|YP_002139534.1| transporter membrane protein [Geobacter bemidjiensis Bem] gi|197088467|gb|ACH39738.1| transporter membrane protein of unknown function DUF140 [Geobacter bemidjiensis Bem] Length = 258 Score = 223 bits (570), Expect = 3e-56, Method: Composition-based stats. Identities = 68/261 (26%), Positives = 130/261 (49%), Gaps = 9/261 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 +GK+++ F +LG ++ G+ + + S++ QM +G Sbjct: 1 MTQFLEPLGKRVLYFNQ-------VLGEMVILQGKILYFLREAPRNVQSILTQMAVIGWD 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PV +++F G V+A Q +L ++G + ++ +RE+G ++T+ ++AGR GS Sbjct: 54 TLPVASVMAFFVGMVLALQTGVELQKYGGQNIIGAIVGHSMVRELGPVMTSFLVAGRCGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AE+G M + EEIDA++T+ +D VR L PR A I+ +P L I ++ IIG +++ Sbjct: 114 AMAAELGVMTVYEEIDALKTLDIDPVRYLAMPRFIACIVCVPALVIYSDVIGIIGGALIS 173 Query: 287 WK--YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 + +A ++ + I GL K+ I +V+ GF+ + +G+ Sbjct: 174 NLHPQIFVSYATYYDSLTDALKIKEIGIGLTKSVAFGSIIALVSCYVGFSTSGGARGIGQ 233 Query: 345 KVTTCVVQSISIVIIIDSLFA 365 T VV S ++++ D + Sbjct: 234 STTRSVVLSFMLILVADYILT 254 >gi|32474659|ref|NP_867653.1| ABC transporter permease [Rhodopirellula baltica SH 1] gi|32445198|emb|CAD75200.1| probable permease of ABC transporter [Rhodopirellula baltica SH 1] Length = 296 Score = 223 bits (570), Expect = 3e-56, Method: Composition-based stats. Identities = 70/253 (27%), Positives = 118/253 (46%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + I+++ +G + T + + +++ Y VGV +PVV L Sbjct: 29 RWIMQWGTAVVGGVTAVGDLAMFTWQMFVWMFTRMPRRDTVLVNFYQVGVLSLPVVALTG 88 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A Q +Q G E +++ +RE+G +L A M+AGR G A+ A +G+M Sbjct: 89 SFIGMVLAVQSYYQFHTIGLETHLGVVINTSLVRELGPVLAATMLAGRVGGAMAAVLGTM 148 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 ++ E+IDA+ TMG D + L+ PR A ++ +P LTI+A+F I+G I A Sbjct: 149 RVTEQIDALTTMGADPIHYLVVPRFMACLLLIPALTIVADFMGIVGGYFYSVIILGIDRA 208 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + ++F G+ K+ F I I++ GF + +GK T V S Sbjct: 209 AYLHHSREGVVAFDLFNGIFKSIFFGGVIAIISCYRGFNCQPGAEGVGKAATEAFVYSFV 268 Query: 356 IVIIIDSLFAIFY 368 +++ ID I Sbjct: 269 MILAIDLFLNIVL 281 >gi|302828760|ref|XP_002945947.1| hypothetical protein VOLCADRAFT_72591 [Volvox carteri f. nagariensis] gi|300268762|gb|EFJ52942.1| hypothetical protein VOLCADRAFT_72591 [Volvox carteri f. nagariensis] Length = 348 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 55/237 (23%), Positives = 116/237 (48%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 + G+ +K + + Q+ VG + + V +L + G V Q + ++ Sbjct: 102 ACLVLGGQVVLRIFKGNIHWRNTVEQLRLVGPASLGVSLLTAGFVGMVFTIQFVREFAKL 161 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 G ++++ RE+ ++TA+++AGR GSA AE+G+M+++E++D++R + D V Sbjct: 162 GLTRSVGGVLALALSRELTPVVTAIILAGRVGSAFAAELGTMQVSEQMDSLRVLFTDPVD 221 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 L++PR+ A +I+ P+L +L + A ++ Y++P V T ++ T Sbjct: 222 YLVTPRVLASMIAGPILNVLCFCMGMGAAVLLADLVYNVPANVIVDSARRALTSYDVLTS 281 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 ++K+ + ++ GF + +G+ T+ VV S+ + I D + +F Sbjct: 282 MVKSWVFGTVVATISCAWGFTTSGGAKGVGESTTSAVVISLVTIFIADFFLSFIFFQ 338 >gi|288942538|ref|YP_003444778.1| hypothetical protein Alvin_2840 [Allochromatium vinosum DSM 180] gi|288897910|gb|ADC63746.1| protein of unknown function DUF140 [Allochromatium vinosum DSM 180] Length = 259 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 64/265 (24%), Positives = 126/265 (47%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + +G+ ++ + +L ++ GE L Q++ +GV Sbjct: 1 MLDPLARLGRGVLDALERLGRGHLLLLAILLGLGEVLRRP-------RLLWEQLFNIGVL 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + +V + G V+A QG + LSQFGA +++ +RE+G ++TA+++AGR+GS Sbjct: 54 SLLIVGVSGLFVGMVLALQGYYVLSQFGAAESLGVMVAASLVRELGPVVTALLVAGRAGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ + M +D VR ++ PR ++S+PLL + + ++G V Sbjct: 114 ALTAEIGLMKATEQLSGLEMMAVDPVRRILVPRFVGGVLSMPLLAAIFSAVGVLGGYFVG 173 Query: 287 WKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + ++S+ + ++ G+IK+ + VA+ +G+ S + + Sbjct: 174 VGLLGVDEGAYWSQMQAKIDFDEDLVNGVIKSLAFGVVVTWVALFQGYDTVPTSEGVSRS 233 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + +V+ +D + F Sbjct: 234 TTRAVVHAALVVLGLDFVLTALMFG 258 >gi|260220241|emb|CBA27582.1| UPF0393 membrane protein HI1086 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 260 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 64/261 (24%), Positives = 129/261 (49%), Gaps = 8/261 (3%) Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171 +G + + D + A ++G ++++ G + Q++++G + ++ Sbjct: 7 AELGFAVRSKLADWGAGARLMGRLVASLGAVLRRPALLR-------DQIHFMGNYSLAII 59 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 + G V+ Q + L +FGA L+S+ +RE G +LTA++ AGR+G+++ AE Sbjct: 60 AVSGVFVGFVMGLQYYYGLQRFGAADSVGMLISLSLVREFGPVLTALLFAGRAGTSLTAE 119 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 IG MK E++ A+ M +D V +++PR W +I++P+L + + ++G IV Sbjct: 120 IGLMKAGEQLSAMEMMAVDPVSRILAPRFWGAVIAMPILAAVFSAVGVLGGWIVSVPMIG 179 Query: 292 IPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 I F+S+ S + ++ G+IK+ A+ +A+ +GF + + T V Sbjct: 180 IDSGAFWSQMQSGVDVWVDVGNGVIKSVVFGFAVSFIALLQGFEAQPTPEGVARATTRTV 239 Query: 351 VQSISIVIIIDSLFAIFYFAI 371 V + V+ +D + F+I Sbjct: 240 VVASLTVLALDFVLTAMMFSI 260 >gi|71909013|ref|YP_286600.1| hypothetical protein Daro_3401 [Dechloromonas aromatica RCB] gi|71848634|gb|AAZ48130.1| Protein of unknown function DUF140 [Dechloromonas aromatica RCB] Length = 263 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 63/261 (24%), Positives = 132/261 (50%), Gaps = 8/261 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 L +G + V+ I A V+ ++G L +R++Y+ GV + Sbjct: 7 LVRRLGHETVERIWRLGFAARFFWAVLMHSGSSFRR-------LPLTLREIYFSGVLSLL 59 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++++ G V+ QG L +FG+ L+++ RE+G +L A+ A R+GS++ Sbjct: 60 IIMVSGLFVGLVLGLQGYEILQRFGSTEALGTLVALSLTRELGPVLAAIFFASRAGSSVT 119 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M ++ + +++PR W +IS+PLL + + ++G ++ + Sbjct: 120 AEIGLMKATEQLKAMDMMAVNPIARVVAPRFWGGVISMPLLAAIFSAMGVLGGWLIGVVF 179 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + ++S+ ++ +I+ G++K+ A+ ++A+ EG+ + + + +T Sbjct: 180 IGVDDGAYWSQMQASVDFRYDIWNGVVKSFVFGIAVSLIAVFEGYDSVPTAEGVSRAITR 239 Query: 349 CVVQSISIVIIIDSLFAIFYF 369 VV S+ V+ +D + F F Sbjct: 240 TVVTSVLTVLALDFVLTSFMF 260 >gi|85703132|ref|ZP_01034236.1| ABC transporter, inner membrane subunit [Roseovarius sp. 217] gi|85672060|gb|EAQ26917.1| ABC transporter, inner membrane subunit [Roseovarius sp. 217] Length = 261 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 121/266 (45%), Gaps = 7/266 (2%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 N IG+ ++ + A + ++ FL +L++ +G Sbjct: 2 NFILGFLASIGRTVLNGLASMGRIALF---ASDTLSHLARPPFYWREFLHALVQ----IG 54 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 +PVV + + TG +A Q ++F AE +++I RE+G +L +M+A R Sbjct: 55 WLSLPVVGMTALFTGGALALQIYAGGARFNAETVVPSIVAIGLTRELGPVLGGLMVAARV 114 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 S+I AEIG+MK+ E+IDA+ T+ + ++ L PR+ A +++P+L + + I+G + Sbjct: 115 ASSIAAEIGTMKVTEQIDALTTLSTNPMKYLTLPRVLAATLAVPVLVGVGDVIGIMGGFL 174 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 V D A + ++ +GLIK + ++ G G + +G+ Sbjct: 175 VGVGRLDFSAATYLHNTMDFLETWDVVSGLIKGAAFGFIVALMGCYYGMNSGRGAQGVGR 234 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370 + VV + +++ + + +F+ Sbjct: 235 ATKSAVVAASVLILASNYILTEVFFS 260 >gi|34558257|ref|NP_908072.1| ABC transporter permease [Wolinella succinogenes DSM 1740] gi|34483976|emb|CAE10972.1| ABC TRANSPORTER, PERMEASE PROTEIN [Wolinella succinogenes] Length = 268 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 72/265 (27%), Positives = 121/265 (45%), Gaps = 4/265 (1%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 +G+ ++ L + + ++ + L QM +GV Sbjct: 6 VTAFFGALGRPVLLLWKSLEKFGEFLMFHLRLIPAYFTPPFRAR----ELFIQMESIGVG 61 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 V++L S TG V+A Q QFGAE F + + RE+G + A+M+ R+ S Sbjct: 62 SFWVIVLTSVFTGMVLAIQFYQGFHQFGAENFMSYPIFLAITRELGPVFAALMLTSRAIS 121 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AE+G+M++ E+IDAI T+ +D R LI PRI A +SLPLL IL NF + A + Sbjct: 122 AMAAELGTMRVTEQIDAIDTLAIDSKRYLIVPRILASTLSLPLLVILFNFIGNLSAYFIS 181 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + + S L+++ L+KA + +V G+ + +G+ Sbjct: 182 IHVLGVNEESYRSIVRQYLELSDLVISLVKAFVFGYLVSLVGTYIGYNTRGGARGVGRST 241 Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371 T+ VV S + + L + F+ A+ Sbjct: 242 TSAVVFSAVTIFGANYLLSAFFLAM 266 >gi|327540665|gb|EGF27237.1| ABC transporter permease protein [Rhodopirellula baltica WH47] Length = 296 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 70/253 (27%), Positives = 118/253 (46%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + I+++ +G + T + + +++ Y VGV +PVV L Sbjct: 29 RWIMQWGTAVVGGVTAVGDLAMFTWQMFVWMFTRMPRRDTVLVNFYQVGVLSLPVVALTG 88 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A Q +Q G E +++ +RE+G +L A M+AGR G A+ A +G+M Sbjct: 89 SFIGMVLAVQSYYQFHTIGLETHLGVVINTSLVRELGPVLAATMLAGRVGGAMAAVLGTM 148 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 ++ E+IDA+ TMG D + L+ PR A ++ +P LTI+A+F I+G I A Sbjct: 149 RVTEQIDALTTMGADPIHYLVVPRFMACLLLIPALTIVADFMGIVGGYFYSVIILGIDRA 208 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + ++F G+ K+ F I I++ GF + +GK T V S Sbjct: 209 AYLHHSREGVVAFDLFNGIFKSIFFGGVIAIISCYRGFNCQPGAEGVGKAATEAFVYSFV 268 Query: 356 IVIIIDSLFAIFY 368 +++ ID I Sbjct: 269 MILAIDLFLNIVL 281 >gi|299136991|ref|ZP_07030174.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX8] gi|298601506|gb|EFI57661.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX8] Length = 259 Score = 223 bits (569), Expect = 4e-56, Method: Composition-based stats. Identities = 71/255 (27%), Positives = 128/255 (50%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 K+V + + + +G + + ++ QM +GV +P+V+L F Sbjct: 2 KLVSPGAFAKNVVASVQEYSLLSGRAIGNLFTNPRYIADTFTQMDSIGVGSLPIVVLTGF 61 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 TG V+A Q A L +FGA + L+++ ++E+G +LT +M++GR+ S + +E+GSMK Sbjct: 62 FTGCVLALQAAVSLKEFGAINMTGKLVALSMVKELGPVLTGLMVSGRNASGMASELGSMK 121 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 + E+IDA+R +G D +R L++PR+ A + L LTI+++ G ++V + Sbjct: 122 VTEQIDAMRALGTDPIRKLVTPRLVATVFMLFFLTIISDACGTGGGALVAVVLLRLNGPA 181 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 FF + + ++ GL+K F I + G + +GK T VV S + Sbjct: 182 FFHTAYMSLVGGDVVEGLVKPLFSGFIIATIGCYYGLRTTGGTQGVGKATTQAVVASSVL 241 Query: 357 VIIIDSLFAIFYFAI 371 +I++D L I Sbjct: 242 IILVDFLVTQLMIGI 256 >gi|253700132|ref|YP_003021321.1| hypothetical protein GM21_1507 [Geobacter sp. M21] gi|251774982|gb|ACT17563.1| protein of unknown function DUF140 [Geobacter sp. M21] Length = 258 Score = 223 bits (569), Expect = 4e-56, Method: Composition-based stats. Identities = 68/261 (26%), Positives = 130/261 (49%), Gaps = 9/261 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 +GK+++ F +LG ++ G+ + + S++ QM +G Sbjct: 1 MTQFLEPLGKRVLYFNQ-------VLGEMVILQGKILYFLREAPRNVQSILTQMAVIGWD 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PV +++F G V+A Q +L ++G + ++ +RE+G ++T+ ++AGR GS Sbjct: 54 TLPVASVMAFFVGMVLALQTGVELQKYGGQNIIGAIVGHSMVRELGPVMTSFLVAGRCGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AE+G M + EEIDA++T+ +D VR L PR A I+ +P L I ++ IIG +++ Sbjct: 114 AMAAELGVMTVYEEIDALKTLDIDPVRYLAMPRFIACIVCVPALVIYSDVIGIIGGALIS 173 Query: 287 WK--YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 + +A ++ + I GL K+ I +V+ GF+ + +G+ Sbjct: 174 NLHPQIFVSYATYYDSLTDALKIREIGIGLTKSVAFGSIIALVSCYVGFSTSGGARGIGQ 233 Query: 345 KVTTCVVQSISIVIIIDSLFA 365 T VV S ++++ D + Sbjct: 234 STTRSVVLSFMLILVADYILT 254 >gi|148360512|ref|YP_001251719.1| toluene tolerance protein Ttg2B [Legionella pneumophila str. Corby] gi|296106421|ref|YP_003618121.1| toluene tolerance protein [Legionella pneumophila 2300/99 Alcoy] gi|148282285|gb|ABQ56373.1| toluene tolerance protein Ttg2B [Legionella pneumophila str. Corby] gi|295648322|gb|ADG24169.1| toluene tolerance protein [Legionella pneumophila 2300/99 Alcoy] Length = 260 Score = 223 bits (569), Expect = 4e-56, Method: Composition-based stats. Identities = 65/265 (24%), Positives = 126/265 (47%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + +G + V+ + S L ++ + + L L Q+Y++GV Sbjct: 1 MLDTIARLGNRGVQALQGIGSSGLFLFSML------FRKPNVLRLWPL-LRYQLYFIGVL 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 ++++ + G V+ QG L +FGA L+++ RE+G +++A++ AGR+GS Sbjct: 54 SCLIIVVSALFIGMVVGLQGYNTLQKFGASSQLGQLLALSVARELGPVISALLFAGRAGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ ++ MG+D + ++ PR A I+LP+L ++ + AI G + Sbjct: 114 ALTAEIGLMKATEQLSSMDMMGVDPLGRVVYPRFAAGFIALPILALIFSAVAIYGGYFIG 173 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + + F+S + +I +G+IK+ A + +++ +GF + + Sbjct: 174 VYWLGVDAGSFWSNMQAAVNFRIDILSGIIKSLVFAFVVTWISVYQGFECVPTAEGISHA 233 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV S V+ +D L Sbjct: 234 TTKTVVYSSLAVLGLDFLLTAMMIG 258 >gi|167838138|ref|ZP_02464997.1| toluene tolerance ABC transporter, permease protein [Burkholderia thailandensis MSMB43] Length = 255 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 57/262 (21%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + + V+ + +Q++++G Sbjct: 1 MISAIGRFVIGGLGRTGYATRMFLRVVLEFFSLLRRP-------RLVTKQIHFLGNYSFV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G +++A++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVSALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D ++ +I+PR+WA +I++PLL + + ++G IV Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPLKNVIAPRMWAGVIAMPLLAAIFSAVGVLGGYIVGVLL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + ++ G++K+ A+ +A+ +G+ + T Sbjct: 174 IGVDPGAFWSQMQGGVEVWADVGNGVLKSVVFGFAVTFIALFQGYEAKPTPEGVSHATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVYASLAVLGLDFLLTALMFS 255 >gi|206603562|gb|EDZ40042.1| Putative integral membrane protein [Leptospirillum sp. Group II '5-way CG'] Length = 255 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 68/244 (27%), Positives = 126/244 (51%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 I G ++ T ++ + Q+ VG PVV++ + TG V+A Q Sbjct: 12 IGLFSISGDLLLTTVTALTGMFRPAFLWWNFFVQLVKVGADSTPVVLVTALFTGMVLALQ 71 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 +F AE ++S+ RE+G ++T +M++GRSGS++ AE+G+M++ E+IDA+ Sbjct: 72 AWIGFQKFNAEGMVGAVVSLSLTRELGPVITGLMVSGRSGSSMAAELGTMRVTEQIDALE 131 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 ++ + + L++PR +A +I+LPLLT++A+F I+G V +P V+ Sbjct: 132 SLAVSPLVYLVTPRFYAGLIALPLLTVMADFVGIVGGYFVAVNLLGLPSNVYVKGIARYV 191 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 L + ++GL+KA + I + G+ + +G+ VT VV S ++++D Sbjct: 192 NLHDFYSGLVKACIFGAVLSIFSCYMGYHARGGAAGVGQSVTKAVVSSSMAILVLDYFLT 251 Query: 366 IFYF 369 + F Sbjct: 252 AWLF 255 >gi|261855373|ref|YP_003262656.1| hypothetical protein Hneap_0760 [Halothiobacillus neapolitanus c2] gi|261835842|gb|ACX95609.1| protein of unknown function DUF140 [Halothiobacillus neapolitanus c2] Length = 266 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 64/267 (23%), Positives = 127/267 (47%), Gaps = 8/267 (2%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 N+F N +G+ + + + G ++ +++++Y +G Sbjct: 6 NAFFNGLALLGQGALAAVAHAGQMILFTGQLLWRLLPAWTRP-------RLIVQELYAIG 58 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V + ++++ G V+ QG LS+F A ++++ +RE+G ++TA++ AGR+ Sbjct: 59 VLSLVIILISGGFVGLVLGLQGYNILSKFNATESLGVMVALSLVRELGPVVTALLFAGRA 118 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 GSA+ AEI MK E++ A+ M +D +R +++PR W + S+PLL L + I G Sbjct: 119 GSAVTAEIALMKTTEQLSAMEMMAVDPLRRVVAPRFWGAVFSMPLLAGLFSLVGIAGGYF 178 Query: 285 VIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 + + A ++ + ++ G+IK+ +G++A+ EGF S + Sbjct: 179 IGVVVLGVDPASYWGQIQQQMQPVDDVLNGVIKSLVFGAVVGLIAVFEGFNAEPTSLGIS 238 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370 + T VV S V+ +D + + F Sbjct: 239 RATTRTVVLSSLCVLGLDFILTAWMFG 265 >gi|319791928|ref|YP_004153568.1| hypothetical protein Varpa_1241 [Variovorax paradoxus EPS] gi|315594391|gb|ADU35457.1| protein of unknown function DUF140 [Variovorax paradoxus EPS] Length = 260 Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats. Identities = 54/248 (21%), Positives = 118/248 (47%), Gaps = 1/248 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 S LG + + Q++++G + ++ + G V+ Sbjct: 13 VRSHLANLGYGAKLFMRLLGPGAQIMRRFSLVRDQIHFLGNYSLAIIGVSGLFVGFVLGL 72 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q + L ++G+ L+++ +RE+G ++ A++ GR+G+++ AEIG MK +E++ A+ Sbjct: 73 QMYYALQRYGSSEALGLLVTLSLVRELGPVVAALLFTGRAGTSLTAEIGLMKADEQLSAM 132 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D V+ +++PR WA +I++PLL + + I+G +V + F+ + Sbjct: 133 EMMAVDPVQRILAPRFWAGVITMPLLAAVFSAVGIMGGYVVGVLMLGVDPGAFWGQMQGG 192 Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++ G+IK+ + +A+ +G++ + + T VV + V+ +D L Sbjct: 193 VDVWRDVGNGVIKSIVFGFTVTFIALLQGYSAQPTPEGVSRATTRTVVTASLAVLGLDFL 252 Query: 364 FAIFYFAI 371 F+I Sbjct: 253 LTAMMFSI 260 >gi|220933918|ref|YP_002512817.1| protein of unknown function DUF140 [Thioalkalivibrio sp. HL-EbGR7] gi|219995228|gb|ACL71830.1| protein of unknown function DUF140 [Thioalkalivibrio sp. HL-EbGR7] Length = 260 Score = 222 bits (567), Expect = 5e-56, Method: Composition-based stats. Identities = 66/261 (25%), Positives = 121/261 (46%), Gaps = 8/261 (3%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170 +G + + L V+ + G +I+++Y VGV + + Sbjct: 5 LQKLGHWGLGVLERLGRGHLFLLRVLMSLGTAVTRP-------RLVIKELYSVGVLSLLI 57 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 + + G V+ QG L FGAE ++++ +RE+G ++TA++ AGR+GSA+ A Sbjct: 58 IAVSGLFVGMVLGYQGYITLVNFGAEEALGSVVALSLVRELGPVITALLFAGRAGSALSA 117 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 EIG MK E++ + M +D V+ +I PR A ISLPLL + + A++G + Sbjct: 118 EIGLMKTTEQLSGMEMMAVDPVKRVILPRFVAAFISLPLLAAIFSAVAVMGGYFIGVGLL 177 Query: 291 DIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 + ++S+ + ++ G+IK+ + +A+ EG+ S + + T Sbjct: 178 GVDGGSYWSQMQANVDFYEDVMNGIIKSLVFGFVVAWIAVFEGYDTVPTSEGVSRATTRT 237 Query: 350 VVQSISIVIIIDSLFAIFYFA 370 VV S V+ +D + F Sbjct: 238 VVHSALAVLALDFILTGLMFG 258 >gi|221069030|ref|ZP_03545135.1| protein of unknown function DUF140 [Comamonas testosteroni KF-1] gi|220714053|gb|EED69421.1| protein of unknown function DUF140 [Comamonas testosteroni KF-1] Length = 258 Score = 222 bits (567), Expect = 5e-56, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 128/264 (48%), Gaps = 8/264 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N IG + + + A +L ++ G + Q++++G + Sbjct: 2 NFLARIGLAVRCQLVNMGIGARLLWRLLGLMGPALRRP-------RLIGDQIHFLGNYSL 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG + L ++G+ ++++ LRE+G ++TA++ AGR+G+A+ Sbjct: 55 AIIGVSGLFVGFVLGLQGYYILQRYGSAEALGMMVALSLLRELGPVVTALLFAGRAGTAL 114 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG MK E++ A+ M +D V+ +++PR WA +I++PLL + + ++G +V Sbjct: 115 TAEIGLMKAGEQLSAMEMMAVDPVKRILAPRFWAGLITMPLLAAVFSAVGVLGGWLVGVV 174 Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + F+ + ++ G++K+ A+ VA+ +G+A + + T Sbjct: 175 MIGVDSGAFWGQMQQGVDWWSDLGNGVLKSFVFGLAVTFVALLQGYAAKPTPEGVSRATT 234 Query: 348 TCVVQSISIVIIIDSLFAIFYFAI 371 VV + V+ +D L F+I Sbjct: 235 RTVVVASLAVLGLDFLLTATMFSI 258 >gi|269137863|ref|YP_003294563.1| putative transport protein [Edwardsiella tarda EIB202] gi|267983523|gb|ACY83352.1| putative transport protein [Edwardsiella tarda EIB202] gi|304557916|gb|ADM40580.1| hypothetical protein ETAF_0456 [Edwardsiella tarda FL6-60] Length = 260 Score = 222 bits (567), Expect = 5e-56, Method: Composition-based stats. Identities = 69/255 (27%), Positives = 119/255 (46%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + F G + L RQ+Y VGV + ++I+ Sbjct: 5 GLAAFGRRGIRVCAAFGRAGLMLFSALVGRPEPGKQWPLLRRQLYSVGVQSLLIIIVSGL 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 65 FIGMVLGLQGYLVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +++PR WA +IS+PLLT++ I G S+V + I Sbjct: 125 ATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLTVIFVAVGIWGGSVVGVDWKGIDAGF 184 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ LIK+ A + +A+ G+ S + + T VV + Sbjct: 185 FWSAMQGAVDYRTDLLNCLIKSLVFAITVMWIALFNGYDAVPTSAGISRATTRTVVHASL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|264676838|ref|YP_003276744.1| hypothetical protein CtCNB1_0702 [Comamonas testosteroni CNB-2] gi|299529658|ref|ZP_07043095.1| hypothetical protein CTS44_02750 [Comamonas testosteroni S44] gi|262207350|gb|ACY31448.1| hypothetical conserved protein [Comamonas testosteroni CNB-2] gi|298722521|gb|EFI63441.1| hypothetical protein CTS44_02750 [Comamonas testosteroni S44] Length = 258 Score = 222 bits (567), Expect = 6e-56, Method: Composition-based stats. Identities = 63/264 (23%), Positives = 128/264 (48%), Gaps = 8/264 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N IG + + + A +L ++ G + Q++++G + Sbjct: 2 NFLARIGLAVRCQLVNMGIGARLLWRLLGLMGPALRRP-------RLIGDQIHFLGNYSL 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG + L ++G+ ++++ LRE+G ++TA++ AGR+G+A+ Sbjct: 55 AIIGVSGLFVGFVLGLQGYYILQRYGSAEALGMMVALSLLRELGPVVTALLFAGRAGTAL 114 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG MK E++ A+ M +D V+ +++PR WA +I++PLL + + ++G +V Sbjct: 115 TAEIGLMKAGEQLSAMEMMAVDPVKRILAPRFWAGLITMPLLAAVFSAVGVLGGWLVGVV 174 Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + F+ + ++ G++K+ A+ VA+ EG+A + + T Sbjct: 175 MIGVDSGAFWGQMQQGVDWWSDLGNGVLKSFVFGLAVTFVALLEGYAAKPTPEGVSRATT 234 Query: 348 TCVVQSISIVIIIDSLFAIFYFAI 371 VV + V+ +D L F+I Sbjct: 235 RTVVVASLAVLGLDFLLTATMFSI 258 >gi|121998898|ref|YP_001003685.1| hypothetical protein Hhal_2119 [Halorhodospira halophila SL1] gi|121590303|gb|ABM62883.1| protein of unknown function DUF140 [Halorhodospira halophila SL1] Length = 258 Score = 222 bits (567), Expect = 6e-56, Method: Composition-based stats. Identities = 65/264 (24%), Positives = 132/264 (50%), Gaps = 8/264 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 L +G++ + + ++G ++ E LI Q+Y VGV Sbjct: 1 MIGLFQALGQRTLTALRGLGEAVLLMGRILRAAPEVVVRP-------RLLIEQVYAVGVL 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++++ + G V+ QG + L+ FGA ++++ +RE+G ++TA++ AGR+GS Sbjct: 54 SLVIILVSALFVGMVLGLQGYYTLADFGATEAVGTMVALSLVRELGPVVTALLFAGRAGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 ++ AE+G MK E++ ++ M +D R +++PR +A ++++PLL + + + G +V Sbjct: 114 SLTAEVGLMKATEQLSSMEMMAVDPERRILAPRFFAAVLAVPLLAAVFSAVGVFGGYLVA 173 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 I F+S + T+ +I G+IK+ +G +A+ +G+ S+ + + Sbjct: 174 VGMVGIDSGAFWSNMQNAVTIQDDILNGVIKSVVFGFLVGWIALHKGYMAEPTSSGVSRA 233 Query: 346 VTTCVVQSISIVIIIDSLFAIFYF 369 T VV + V+ +D L F Sbjct: 234 TTLGVVHASLAVLGLDFLLTALMF 257 >gi|187930306|ref|YP_001900793.1| hypothetical protein Rpic_3239 [Ralstonia pickettii 12J] gi|187727196|gb|ACD28361.1| protein of unknown function DUF140 [Ralstonia pickettii 12J] Length = 255 Score = 222 bits (566), Expect = 7e-56, Method: Composition-based stats. Identities = 62/262 (23%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ I+ A L +I +G+ +I Q+ ++G Sbjct: 1 MISTIGRFVLVLISRFGYAARTLISLIGASGDVLRRP-------RLVIEQLRFIGNDSFI 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYNTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D + +++PR WA I++PLL + + I+G V Sbjct: 114 AEIGLMKAGEQLIAMEMMAVDPLARVLAPRFWAGFIAMPLLAAIFSAVGILGGYFVGVGL 173 Query: 290 YDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + + ++ G+IK+ A+ +A+ +G+ + + T Sbjct: 174 IGVDPGAFWSQMQAGVDVMDDVLNGVIKSVVFGVAVTFIALYQGYEAKATPEGVSRATTR 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D + F+ Sbjct: 234 TVVIASLTVLALDFVLTALMFS 255 >gi|309782892|ref|ZP_07677612.1| toluene tolerance ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] gi|308918316|gb|EFP63993.1| toluene tolerance ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] Length = 255 Score = 222 bits (566), Expect = 7e-56, Method: Composition-based stats. Identities = 62/262 (23%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ I+ A L +I +G+ +I Q+ ++G Sbjct: 1 MISTIGRFVLVLISRFGYAARTLISLIGASGDVLRRP-------RLVIEQLRFIGNDSFI 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYNTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D + +++PR WA I++PLL + + I+G V Sbjct: 114 AEIGLMKAGEQLIAMEMMAVDPLARVLAPRFWAGFIAMPLLAAIFSAVGILGGYFVGVGL 173 Query: 290 YDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + + ++ G+IK+ A+ +A+ +G+ + + T Sbjct: 174 IGVDPGAFWSQMQAGVDVMDDVLNGVIKSFVFGVAVTFIALYQGYEAKATPEGVSRATTR 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D + F+ Sbjct: 234 TVVIASLTVLALDFVLTALMFS 255 >gi|302755016|ref|XP_002960932.1| ATP-binding cassette transporter, subfamily I, member 10, SmABCI10 [Selaginella moellendorffii] gi|300171871|gb|EFJ38471.1| ATP-binding cassette transporter, subfamily I, member 10, SmABCI10 [Selaginella moellendorffii] Length = 342 Score = 222 bits (566), Expect = 7e-56, Method: Composition-based stats. Identities = 55/237 (23%), Positives = 115/237 (48%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 + G+ + + + + + ++Q+ VG + V +L + G V Q + ++ Sbjct: 95 ATLVIGGQVILRTLQGRIHVRNTVQQLEAVGPGSLGVNLLTASFVGMVFTIQFVREFAKL 154 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 G ++++ RE+ ++TAV++AGR GSA AE+G+M+++E+ D +R +G D V Sbjct: 155 GLTRSVGGVLALALARELSPVVTAVILAGRVGSAFAAELGTMQVSEQTDTLRVLGTDPVD 214 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 LI+PR+ A +++P LT++ + + ++ Y + + +I + Sbjct: 215 YLITPRVLACCLAMPFLTLMCFSVGMAASVLLADSVYRVSANIILDSAARALQPWDIVST 274 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +IK+ I IV+ G + +G+ T+ VV S+ + I D + + +F Sbjct: 275 MIKSFVFGGIISIVSCAWGVTTLGGAKGVGESTTSAVVISLVCIFIADFILSWCFFQ 331 >gi|134096234|ref|YP_001101309.1| ABC transporter membrane protein [Herminiimonas arsenicoxydans] gi|133740137|emb|CAL63188.1| ABC transporter, permease protein [Herminiimonas arsenicoxydans] Length = 259 Score = 222 bits (566), Expect = 7e-56, Method: Composition-based stats. Identities = 63/265 (23%), Positives = 133/265 (50%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + IG+ + +F+ + I +I +G +I Q++++G Sbjct: 2 IAAVLTAIGRGVREFVTNLGFATRIFFKIIGVSGGLLRRPQ-------LVISQIHFIGNY 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++ + G V+ QG + L+++G+E L+++ RE+G ++TA++ AGR+G+ Sbjct: 55 SLVLIAVSGLFVGFVLGLQGYYTLNKYGSEQALGLLVALSLTRELGPVVTALLFAGRAGT 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 ++ AEIG MK E++ A+ M ++ ++ +++PR WA ++++P+L + + IIG IV Sbjct: 115 SLTAEIGLMKAGEQLSAMEMMAVNPLQRVLAPRFWAGVVAMPVLAAIFSAIGIIGGYIVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 K + F+S+ + ++ G+IK+ A+ VA+ +G+ + + Sbjct: 175 VKMIGVDEGAFWSQMQGGVDVWDDVLNGVIKSVVFGFAVTFVALYQGYQAQPTPEGVARA 234 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + V+ +D L F+ Sbjct: 235 TTRTVVIASLSVLWLDFLLTALMFS 259 >gi|196232812|ref|ZP_03131662.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428] gi|196223011|gb|EDY17531.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428] Length = 245 Score = 222 bits (566), Expect = 7e-56, Method: Composition-based stats. Identities = 76/228 (33%), Positives = 127/228 (55%), Gaps = 1/228 (0%) Query: 143 CASSYKFKGF-LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSID 201 + ++ + F + + QM +GV +P+ L SF G +A Q A QL + GA F D Sbjct: 16 LLAPWRGQFFKIGEVFHQMVLIGVRALPMASLTSFSIGLTLAMQAAGQLRKMGASQFVPD 75 Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261 L+ + LRE+G LL AV++ GRSGSA+ AE+G+M+++EEI+A+ M ++ +R LI PR Sbjct: 76 LVILSLLRELGPLLVAVVVIGRSGSAVTAELGTMRVSEEIEALEVMAINPIRFLIVPRFL 135 Query: 262 ALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMA 321 A++I LP+LTI ++ ++G + D A + A ++++GLIK+ A Sbjct: 136 AMMIMLPVLTIFGSYVGMVGGWSICHFALDYSTASYILHSFERARPWDLYSGLIKSVVFA 195 Query: 322 CAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 I +A G V + +G+ T VV S+ I++I ++ +F Sbjct: 196 WIIITIACHMGLRVEGGAEGVGQATTGSVVWSLLIMLIANATLTALFF 243 >gi|239814162|ref|YP_002943072.1| hypothetical protein Vapar_1155 [Variovorax paradoxus S110] gi|239800739|gb|ACS17806.1| protein of unknown function DUF140 [Variovorax paradoxus S110] Length = 260 Score = 222 bits (566), Expect = 7e-56, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 122/261 (46%), Gaps = 8/261 (3%) Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171 IG + + D A + ++ + + Q++++G + ++ Sbjct: 7 ADIGFAVRSKLADLGYGAKLFLRLLVQGAQSLQRFGLVR-------DQIHFLGNYSLAII 59 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 + G V+ Q + L ++G+ L+++ +RE+G ++ A++ GR+G+++ AE Sbjct: 60 AVSGLFVGFVLGLQMYYALQRYGSSEALGLLVALSLVRELGPVVAALLFTGRAGTSLTAE 119 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 IG MK E++ A+ M +D V+ +++PR WA +I++PLL + + I+G +V Sbjct: 120 IGLMKAGEQLSAMEMMAVDPVQRILAPRFWAGVITMPLLAAVFSAVGIMGGYVVGVLMLG 179 Query: 292 IPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 + F+ + + ++ G+IK+ + +A+ +G+ + + T V Sbjct: 180 VDPGAFWGQMQGGVDVWRDVGNGVIKSIVFGFTVTFIALLQGYEAQPTPEGVSRATTRTV 239 Query: 351 VQSISIVIIIDSLFAIFYFAI 371 V + V+ +D L F+I Sbjct: 240 VMASLSVLGLDFLLTAMMFSI 260 >gi|91215888|ref|ZP_01252857.1| ABC transporter permease protein [Psychroflexus torquis ATCC 700755] gi|91185865|gb|EAS72239.1| ABC transporter permease protein [Psychroflexus torquis ATCC 700755] Length = 262 Score = 222 bits (566), Expect = 8e-56, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 129/255 (50%), Gaps = 10/255 (3%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 +F + + I E S +++K LIRQ + +G +V + F+ G Sbjct: 15 RFFEEIGDMTYF---AIRFFKEVVTSPFEWK----ELIRQCFQMGNRSFLLVGVTGFILG 67 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V Q L +FGA + ++SI +REIG ++ A++ AGR GS+I AE+GSMK+ E Sbjct: 68 LVFTLQSRPTLLEFGAVSWMPSMVSISIVREIGPVIIALICAGRIGSSIGAELGSMKVTE 127 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +IDA+ G + + L+ RI A + LPLL I+ + A+ G++IV ++ + ++F+ Sbjct: 128 QIDAMEVSGTNPFKYLVVTRILATTLMLPLLIIMGDAVALFGSAIVENLMGEVSYLLYFN 187 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 + ++I IK+ F AIG+V +G+ + +G+ VV + ++ + Sbjct: 188 KVFDALKFSDIIPATIKSFFFGFAIGLVGCYKGYNCSKGTVGVGEASNAAVVYTSMLLFV 247 Query: 360 IDSL---FAIFYFAI 371 ID + +F I Sbjct: 248 IDFIAVFLTDIFFYI 262 >gi|86158287|ref|YP_465072.1| ABC amino acid transporter, inner membrane subunit [Anaeromyxobacter dehalogenans 2CP-C] gi|85774798|gb|ABC81635.1| ABC amino acid transporter, inner membrane subunit [Anaeromyxobacter dehalogenans 2CP-C] Length = 251 Score = 222 bits (566), Expect = 8e-56, Method: Composition-based stats. Identities = 65/247 (26%), Positives = 115/247 (46%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 ++ G +I GE A +++ ++ QM ++G +V + G Sbjct: 1 MLSRLRDAFEDFGRMILFAGEIVAWAFRPPFRPDQILAQMAFIGAGSAFIVGVTGTFAGM 60 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V Q + L QF AE ++ + RE+ + TA+M+ GR+GSAI E+G+M++ E+ Sbjct: 61 VFGLQMNYALRQFAAEGYTGGSTAFALARELSPVFTALMVTGRAGSAITTELGTMRVTEQ 120 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ TM + ++ L+ PR+ A I+ P+LT+L N GA ++ IP F Sbjct: 121 IDAMETMAVSPIQYLVVPRVLASILMFPVLTMLFNALGYGGAYVMGVFVSGIPEGPFIQH 180 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 +IF GL KA + ++ G++ + +G+ T VV S +++ Sbjct: 181 TREFLGPDDIFHGLGKAVLFGYIVAVITTWRGYSASGGARGVGEGTTRAVVASSVAILVA 240 Query: 361 DSLFAIF 367 D + Sbjct: 241 DYAGTVL 247 >gi|291279509|ref|YP_003496344.1| ABC transporter permease [Deferribacter desulfuricans SSM1] gi|290754211|dbj|BAI80588.1| ABC transporter, permease [Deferribacter desulfuricans SSM1] Length = 256 Score = 222 bits (566), Expect = 8e-56, Method: Composition-based stats. Identities = 70/245 (28%), Positives = 128/245 (52%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + G + +F ++ + L +QM ++GV+ + V+IL TG V A Sbjct: 12 ILNFIYGSGRIFLFFIDFFRWAFIPPYRVRLLFKQMEFIGVNSLSVIILTGTFTGMVFAF 71 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q +FGAE ++ + RE+G +L+++M+A R+GSAI AEIG+M++ E+IDA+ Sbjct: 72 QSYIGFHRFGAEYMVGTVVGLGMARELGPVLSSIMVAARAGSAIAAEIGTMRVTEQIDAL 131 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 + ++ V+ L+ PR+ A +I +P+L I+A F ++G V + I ++ + Sbjct: 132 YALAVEPVQYLVVPRMLAGVIVMPILNIIAVFCGVVGGYFVGVEILGINKTLYLEYMYRY 191 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +I+ G+IKA + +V +GF + +GK T VV S ++++ D + Sbjct: 192 VDFDDIYNGIIKATVFGLILTLVGCYKGFYTSGGAEGVGKSTTESVVLSSVLILVFDYIL 251 Query: 365 AIFYF 369 F F Sbjct: 252 TAFMF 256 >gi|302767312|ref|XP_002967076.1| hypothetical protein SELMODRAFT_169002 [Selaginella moellendorffii] gi|300165067|gb|EFJ31675.1| hypothetical protein SELMODRAFT_169002 [Selaginella moellendorffii] Length = 342 Score = 222 bits (566), Expect = 8e-56, Method: Composition-based stats. Identities = 55/237 (23%), Positives = 115/237 (48%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 + G+ + + + + + ++Q+ VG + V +L + G V Q + ++ Sbjct: 95 ATLVIGGQVILRTLQGRIHVRNTVQQLEAVGPGSLGVNLLTASFVGMVFTIQFVREFAKL 154 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 G ++++ RE+ ++TAV++AGR GSA AE+G+M+++E+ D +R +G D V Sbjct: 155 GLTRSVGGVLALALARELSPVVTAVILAGRVGSAFAAELGTMQVSEQTDTLRVLGTDPVD 214 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 LI+PR+ A +++P LT++ + + ++ Y + + +I + Sbjct: 215 YLITPRVLACCLAMPFLTLMCFSVGMAASVLLADSVYRVSANIILDSAARALQPWDIVST 274 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +IK+ I IV+ G + +G+ T+ VV S+ + I D + + +F Sbjct: 275 MIKSFVFGGIISIVSCAWGVTTLGGAKGVGESTTSAVVISLVCIFIADFILSWCFFQ 331 >gi|312888063|ref|ZP_07747647.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM 18603] gi|311299544|gb|EFQ76629.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM 18603] Length = 256 Score = 222 bits (566), Expect = 8e-56, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 130/255 (50%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ++D+ G + TG F + K + + L+ Q Y +G P+V L F+ Sbjct: 1 MSLLSDTNDFLEQTGKISRFTGHFFSRGIKPRFEIKELLAQCYLIGYKSFPLVGLTGFIM 60 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G V+ Q L +G + ++ I +REIG ++TA++ AG+ GS+I AE+GSMK+ Sbjct: 61 GLVLTMQLRPSLVVYGVQSELPVMVGIAIVREIGPVITALIFAGKIGSSIGAELGSMKVT 120 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 E+IDA+ G + + L++ R+ A + LP+LT+L + ++ GA I + FF Sbjct: 121 EQIDAMDVSGTNPFKYLVATRVVATTLMLPVLTLLGDAISLFGAYIGVNINAVTSVRFFF 180 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 ++ + T ++I +IK F A+GI+ +GF + +G + VV S ++ Sbjct: 181 TQVFQSLTYSDIVPAIIKTLFFGFAVGIIGCYKGFNSTKGTQGVGNSANSAVVLSSVVIF 240 Query: 359 IIDSLFAIFYFAIGI 373 +ID L +G+ Sbjct: 241 VIDLLTVQLTNLLGL 255 >gi|298490672|ref|YP_003720849.1| hypothetical protein Aazo_1524 ['Nostoc azollae' 0708] gi|298232590|gb|ADI63726.1| protein of unknown function DUF140 ['Nostoc azollae' 0708] Length = 261 Score = 222 bits (565), Expect = 8e-56, Method: Composition-based stats. Identities = 62/236 (26%), Positives = 110/236 (46%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 + G+ + K + ++ G + +P V+L+S G + Q A +L +FG Sbjct: 22 TVLLFGQISLHILQGKTYYGKVLEHTVTAGPASLPPVLLVSGFAGMIFTIQTARELVRFG 81 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 A ++ RE+ +LTA +IAG+ GSA AEIG+M++ E+IDA+ + D + Sbjct: 82 AVENVGGAFALAFCRELAPILTASIIAGQVGSAFAAEIGAMRVTEQIDALYMLKTDPIDY 141 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L+ PR+ A + +PL+ ILA I G + +Y + F T +++F L Sbjct: 142 LVLPRVIACCLMMPLMMILAVIMGITGGAFAASYFYQVQPETFLESVRDFLTPSDVFIIL 201 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +K + + G + +G+ TT VV + + I+D + A+ F Sbjct: 202 LKGLIFGLIVAVNGCSWGLTTKGGAKEVGESATTAVVTTWVAIFIMDFILALILFE 257 >gi|124268284|ref|YP_001022288.1| hypothetical protein Mpe_A3100 [Methylibium petroleiphilum PM1] gi|124261059|gb|ABM96053.1| putative membrane protein [Methylibium petroleiphilum PM1] Length = 260 Score = 222 bits (565), Expect = 8e-56, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 126/260 (48%), Gaps = 8/260 (3%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172 +G + + + A + G ++++ G ++ Q++++G + ++ Sbjct: 8 DVGYAVRAQLTGLGAAARLFGRMLASFGPALRRG-------RLVVDQVHFLGNHSLAIIT 60 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 + G V+ QG + L ++G+ L+++ +RE+G ++TA++ AGR+G+++ AEI Sbjct: 61 VSGLFVGFVLGLQGYYTLQRYGSSEALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEI 120 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 G MK E++ A+ M +D V+ +++PR W + ++PLL + + I+G V I Sbjct: 121 GLMKAGEQLTAMEMMAVDPVQRVLAPRFWGGVFAMPLLAAVFSAVGILGGWAVGVLLIGI 180 Query: 293 PFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 F+S+ ++ G++K+ + VA+ EG+ + + T VV Sbjct: 181 DAGGFWSQMQGGVDVFKDVGNGIVKSMVFGVTVTFVALWEGYTCQPTPEGVSRATTRTVV 240 Query: 352 QSISIVIIIDSLFAIFYFAI 371 + V+ +D + F+I Sbjct: 241 VASLAVLGLDFVLTAMMFSI 260 >gi|241664474|ref|YP_002982834.1| hypothetical protein Rpic12D_2892 [Ralstonia pickettii 12D] gi|240866501|gb|ACS64162.1| protein of unknown function DUF140 [Ralstonia pickettii 12D] Length = 255 Score = 222 bits (565), Expect = 9e-56, Method: Composition-based stats. Identities = 61/262 (23%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ I+ A L +I +G+ ++ Q+ ++G Sbjct: 1 MISTIGRFVLVLISRFGYAARTLISLIGASGDVLRRP-------RLVLEQLRFIGNDSFI 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYNTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D + +++PR WA I++PLL + + I+G V Sbjct: 114 AEIGLMKAGEQLIAMEMMAVDPLARVLAPRFWAGFIAMPLLAAIFSAVGILGGYFVGVGL 173 Query: 290 YDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + + ++ G+IK+ A+ +A+ +G+ + + T Sbjct: 174 IGVDPGAFWSQMQAGVDVMDDVLNGVIKSVVFGVAVTFIALYQGYEAKATPEGVSRATTR 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D + F+ Sbjct: 234 TVVIASLTVLALDFVLTALMFS 255 >gi|171462919|ref|YP_001797032.1| protein of unknown function DUF140 [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192457|gb|ACB43418.1| protein of unknown function DUF140 [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 262 Score = 222 bits (565), Expect = 9e-56, Method: Composition-based stats. Identities = 69/266 (25%), Positives = 130/266 (48%), Gaps = 8/266 (3%) Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 + NL +G I + ++ A +L V+ +G +I Q+ +VG Sbjct: 3 ALLNLFGDLGFFIRRNLSSLGLAARMLVAVVFRSGFLLKRP-------RLVIDQILFVGN 55 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 ++ + G V+ QG + L+++G+E L+++ RE+G ++TA++ AGR+G Sbjct: 56 HSFVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLTRELGPVITALLFAGRAG 115 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 +++ AEIG MK E++ A+ M +D + +I+PR+WA IIS+P+L + I+G +V Sbjct: 116 TSLTAEIGLMKAGEQLTAMEMMAVDPLGRVIAPRLWAGIISMPILATIFTAVGILGGYLV 175 Query: 286 IWKYYDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 + F+S+ ++ GLIK+ A+ +A+ +G+ + + Sbjct: 176 GVPLIGVDSGAFWSQMQGGVDLFSDTGNGLIKSMVYGVAVTFIALYQGYESRPTPEGVSQ 235 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370 T VV S V+ +D L F+ Sbjct: 236 ATTRTVVISSLSVLALDFLLTAMMFS 261 >gi|148264681|ref|YP_001231387.1| hypothetical protein Gura_2637 [Geobacter uraniireducens Rf4] gi|146398181|gb|ABQ26814.1| protein of unknown function DUF140 [Geobacter uraniireducens Rf4] Length = 401 Score = 222 bits (565), Expect = 9e-56, Method: Composition-based stats. Identities = 75/368 (20%), Positives = 160/368 (43%), Gaps = 6/368 (1%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 + AG+W+ D V+ + + + + + D+ ++ F+ K Sbjct: 40 GALLTLAGDWRLGSAIPSPDGVIAGLGAAEKGQRLAFETGNLQGWDSG----LLVFLAKL 95 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 + G+S L + + ++ + + + + + Sbjct: 96 FDICRRNGISVDESGLPAGVRKLIDLASPEKQRSGVTHGGEHPSFLVWVADTALAQVKGA 155 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 +G + F+ + LI + G +P+V LIS + G ++A Sbjct: 156 KEVLAFIGEATLAFVKMLRGKADFRR--MDLIVTIQETGAQALPIVTLISLLVGMILAFI 213 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 + QL FGA+I+ D++ I +R +G ++T ++++GR+G+A A++G+M++NEEIDA+ Sbjct: 214 ASIQLKMFGAQIYVADVVGIGIVRVMGAIMTGIIMSGRTGAAFAAQLGTMQVNEEIDALE 273 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 T+G V L+ PR+ AL++ +PLL + ++ ++G IV D+ F + + S Sbjct: 274 TLGFSPVEFLVLPRMLALMLMMPLLCVYSDLMGVLGGMIVGVGMLDLGFMEYVHQSRSAL 333 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 L + GL + + + G ++++G T+ VV I +++ ++ Sbjct: 334 NLTHFLVGLFHSFVFGILVAVAGCLRGLQCERSASAVGYAATSAVVTGIVCIVVATAIIT 393 Query: 366 IFYFAIGI 373 + +GI Sbjct: 394 LSCQVLGI 401 >gi|225024503|ref|ZP_03713695.1| hypothetical protein EIKCOROL_01378 [Eikenella corrodens ATCC 23834] gi|224942654|gb|EEG23863.1| hypothetical protein EIKCOROL_01378 [Eikenella corrodens ATCC 23834] Length = 258 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 131/262 (50%), Gaps = 8/262 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G K + F+ + L V++ +G L IRQ+Y+ GV + Sbjct: 2 NFFRTLGAKTLDFLQELGKTTLFLFAVLARSGTLLPR-------LQLGIRQIYFTGVLSI 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG QL++F + +++ LRE+G +L ++ A +G A+ Sbjct: 55 VIIAVSGLFVGMVLGLQGYTQLAKFKSADILGYMVAASLLRELGPVLAGILFASSAGGAM 114 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 +EIG MK E+++A++ M +D V ++ PR WA +IS+PLL + N + I GA ++ + Sbjct: 115 TSEIGLMKTTEQLEAMKVMAVDPVARVVVPRFWAGVISMPLLASICNVAGIYGAYLIGVR 174 Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 Y + +F+S+ + + ++ GLIK+ AI ++A+ +GF + + T Sbjct: 175 YLGLDGGIFWSQMQANIDVGYDVVNGLIKSVVFGVAISLIAVYQGFHCRSTPEGILRAST 234 Query: 348 TCVVQSISIVIIIDSLFAIFYF 369 VV S V+ +D + F Sbjct: 235 RTVVSSALTVLALDFVLTAIMF 256 >gi|328952205|ref|YP_004369539.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM 11109] gi|328452529|gb|AEB08358.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM 11109] Length = 255 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 70/260 (26%), Positives = 125/260 (48%), Gaps = 7/260 (2%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 +G+ V F+ + A +L Y+++ F RQ+ ++GV Sbjct: 3 FLTTLGRLWVHFLQELGGMALLLAQ---AGLWLPRRPYRWRHFF----RQLEFIGVKSFF 55 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +V+L TG V+A Q + +FG E +++ RE+G +LT++M+A R+GSA+ Sbjct: 56 IVVLTGLFTGMVLALQAYYGFRKFGGESLLGGAVALSMTRELGPVLTSLMVAARAGSAMA 115 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AE+G+MK+ E++DA+ M + V L PR+ A +I PLLT++A + I+G V Sbjct: 116 AELGAMKVTEQVDALLAMAVQPVHYLALPRLLAAVIMTPLLTVIAVYIGIVGGYFVGVIL 175 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 D+ F + ++++ GL K+ + +++ EG + +G T Sbjct: 176 LDVNPGTFMQKMLEMVNSSDLYNGLFKSVIFGLLLALISCYEGLQAKGGAEGVGLVTTRA 235 Query: 350 VVQSISIVIIIDSLFAIFYF 369 VV S ++I D + F Sbjct: 236 VVYSAISILIADYILTALLF 255 >gi|256422329|ref|YP_003122982.1| hypothetical protein Cpin_3314 [Chitinophaga pinensis DSM 2588] gi|256037237|gb|ACU60781.1| protein of unknown function DUF140 [Chitinophaga pinensis DSM 2588] Length = 245 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 74/235 (31%), Positives = 125/235 (53%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 I+G + TG F + ++ IRQ + VG V +V + F+ G V+ Q Sbjct: 1 MEIVGDQVLFTGRFARNIFRGGFEWGEFIRQCFIVGYLSVGLVGITGFIIGLVMTLQTQP 60 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L FGAE + ++SI +REIG ++ A++ AG+ S+I AE+GSMK+ E+IDA+ Sbjct: 61 TLKDFGAESYVPGMVSISIIREIGPVIIALICAGKIASSIGAELGSMKVTEQIDAMEVSA 120 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + V+ L+ RI A I +PLLTI+A+ A++G + + + +FF + + Sbjct: 121 ANPVQYLVVTRILACTIMVPLLTIMADGLAMLGGWVGVNIQDHVSATLFFKKSFKALEFS 180 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 ++ +IK F AIG V +G+ + S+GK + VV + +I+ID++ Sbjct: 181 DVVPSVIKTFFFGYAIGFVGCYKGYHSARGTESVGKAANSAVVSASLWIILIDAI 235 >gi|284051975|ref|ZP_06382185.1| hypothetical protein AplaP_10931 [Arthrospira platensis str. Paraca] gi|291567910|dbj|BAI90182.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 261 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 65/236 (27%), Positives = 114/236 (48%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + G+ + K + + QM VG + + +L + G V Q A + GA Sbjct: 21 LFLGGQVLLHVLQGKIHRRNTLEQMAIVGPESLFIALLTASFVGMVFTIQVAQEFIALGA 80 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 ++++ RE+ +LT+V+IAGR SA AE+G+M++ E+IDA+ M D V L Sbjct: 81 GHLVGGVLALSLSRELTPVLTSVIIAGRVCSAFAAELGTMQVTEQIDALYMMKTDPVDYL 140 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PR+ A + LPLLTI+ + + G ++ +Y+IP +F L ++ + I Sbjct: 141 VIPRVLACSLMLPLLTIICLITGLAGGLLIATSFYNIPSVLFLDSIRDLMGLWDLISAEI 200 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 K+ AI ++ G + +G+ TT VV S+ + I+D + F + Sbjct: 201 KSVVFGWAIAVIGTSWGLTTTGGAKGVGQSTTTAVVTSLLAIFILDFFLSWLLFKV 256 >gi|256828811|ref|YP_003157539.1| protein of unknown function DUF140 [Desulfomicrobium baculatum DSM 4028] gi|256577987|gb|ACU89123.1| protein of unknown function DUF140 [Desulfomicrobium baculatum DSM 4028] Length = 263 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 72/254 (28%), Positives = 128/254 (50%), Gaps = 6/254 (2%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 S +G + + + ++ +Y++G + ++IL++F TG Sbjct: 11 LGATSLGIIKNVGQWGVFSLTAVLGMIHIRRLIPKILYDIYFIGFKSLNIIILVAFFTGM 70 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+ QG + L +F AE +++ +RE+G +LTA+M+ GR+GS+I AEIG M+I+E+ Sbjct: 71 VLGLQGYYTLIKFSAEGMLGVAVALSLVRELGPVLTAIMLIGRAGSSISAEIGIMRISEQ 130 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ TM +D VR L++P+I A +I PLLT + + I+G +FFS+ Sbjct: 131 IDALSTMDVDPVRYLVTPKIIASLICFPLLTAIFDCVGILGGYFSSVL-LSSRSGIFFSK 189 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCVVQSIS 355 S+ L+++ G IK+ A + ++ G+ + + T+ VVQS Sbjct: 190 IQSSLLLSDVTGGFIKSFVFAFIVITISCYCGYYTHQNQSSAGAEGVSNSTTSAVVQSCV 249 Query: 356 IVIIIDSLFAIFYF 369 V++ D + F Sbjct: 250 YVLVSDYVITSFLM 263 >gi|293602880|ref|ZP_06685319.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292818674|gb|EFF77716.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 262 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 61/263 (23%), Positives = 132/263 (50%), Gaps = 8/263 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N+ +G + K I+ G +++ +G + + +Q++++G + Sbjct: 6 NMVGALGGWVRKQISGIGFFTRFFGGMLARSGIIFSRP-------RLVSQQVHFIGNYSL 58 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 59 LIIAVSGMFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTALLFAGRAGTSL 118 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG MK E++ A+ M +D +R ++ PR+W II++P+L + + ++G +V Sbjct: 119 TAEIGLMKAGEQLSAMEMMAVDPIRRVLVPRLWGGIIAMPILAAVFSMVGVLGGWVVGVL 178 Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + F+S+ + + ++ G+IK+ + +VA+ EG+ + + T Sbjct: 179 MIGVDAGAFWSQMQNGVDVWNDVANGVIKSVVFGITVTLVALYEGWQAKPTPEGVARATT 238 Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370 VV V+ +D L F Sbjct: 239 RTVVVGSLAVLGLDFLLTALMFG 261 >gi|330430336|gb|AEC21670.1| hypothetical protein PT7_3130 [Pusillimonas sp. T7-7] Length = 262 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 59/263 (22%), Positives = 130/263 (49%), Gaps = 8/263 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 L +G ++ I+ + + G +++ + + +Q++++G + Sbjct: 6 QLIAALGARVRNSISGMGAFMRLAGAILARSDIVFKRP-------GLISQQIHFIGNYSL 58 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 59 LIIAVSGLFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTALLFAGRAGTSL 118 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG MK E+I A+ M +D +R +++PR W ++++P+L + + IIG IV Sbjct: 119 TAEIGLMKAGEQIAAMEVMAVDPIRRVLAPRFWGGVVAMPVLAAVFSMVGIIGGWIVGVV 178 Query: 289 YYDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 I F+S+ ++ G +K+ A+ ++A+ G+ + + T Sbjct: 179 LIGIDPGAFWSQMQGGVDVFKDVLNGFVKSVVFGVAVTLIALHAGWTAKATPEGVSRATT 238 Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370 VV +V+ +D + F+ Sbjct: 239 RTVVSGSLMVLGLDFILTALMFS 261 >gi|16127925|ref|NP_422489.1| ABC transporter permease [Caulobacter crescentus CB15] gi|221236745|ref|YP_002519182.1| organic solvent resistance transport system permease [Caulobacter crescentus NA1000] gi|13425459|gb|AAK25657.1| ABC transporter, permease protein, putative [Caulobacter crescentus CB15] gi|220965918|gb|ACL97274.1| organic solvent resistance transport system permease [Caulobacter crescentus NA1000] Length = 269 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 72/254 (28%), Positives = 123/254 (48%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + + ++G V ++ FL L RQ+ +G +PVV L + Sbjct: 15 IQALGRSTLATVRMVGAVGVFAVRGVIAALTPIWFLSQLRRQIVAIGFFSLPVVGLTAVF 74 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TGA +A +F AE ++++ RE+G +L A+M+AGR +AI AEIG+M+ Sbjct: 75 TGAALALNIFTGGGRFNAEQVMPQIVALGITRELGPVLAALMLAGRVSAAIAAEIGAMRA 134 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+RT+ D R L++PR+ A +++LPLLT +A+ I G +V + + V+ Sbjct: 135 TEQIDAMRTLSTDPFRYLVAPRLLAAVLTLPLLTAVADIIGIAGGWLVATRVLEFNPTVY 194 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 +I +GLIKA + ++ G+ + +G+ T VV S ++ Sbjct: 195 IRNTIDFLESWDIISGLIKAAVFGFIVALMGCYHGYNASGGARGVGRATTHAVVSSAILI 254 Query: 358 IIIDSLFAIFYFAI 371 D L + + Sbjct: 255 FATDYLLTTLFTHM 268 >gi|114321371|ref|YP_743054.1| hypothetical protein Mlg_2222 [Alkalilimnicola ehrlichii MLHE-1] gi|114227765|gb|ABI57564.1| protein of unknown function DUF140 [Alkalilimnicola ehrlichii MLHE-1] Length = 259 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 127/264 (48%), Gaps = 8/264 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 ++G + + + ++ +++ A +I+Q+Y VGV Sbjct: 2 ITAAFRNLGARTLAALGGVGRAHLLMFRLLAGLLRVLAQPRY-------IIQQLYAVGVL 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++++ G V+A QG + L FGA L+++ LRE+G ++TA++ AGR+GS Sbjct: 55 SLVIIVVSGLFVGMVLALQGYYTLVDFGAAESVGVLVALSLLRELGPVVTALLFAGRAGS 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 ++ AE+G MK E++ ++ M +D +I+PR A ++++PLL + + I G +V Sbjct: 115 SLTAEVGLMKATEQLSSMEMMAVDPELRVIAPRFLACVVAVPLLAGIFSLVGIYGGYLVS 174 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + ++ S + + ++ G+IK+ +G +A+ +G+ S + + Sbjct: 175 VGLIGLDGGAYWGNMQSAVSFSDDVLNGVIKSVVFGIVVGWIALYKGYEAVPTSEGVSRA 234 Query: 346 VTTCVVQSISIVIIIDSLFAIFYF 369 T VV + V+ +D L F Sbjct: 235 TTHGVVHASLAVLGLDFLLTALMF 258 >gi|313894582|ref|ZP_07828145.1| conserved hypothetical protein [Veillonella sp. oral taxon 158 str. F0412] gi|313440772|gb|EFR59201.1| conserved hypothetical protein [Veillonella sp. oral taxon 158 str. F0412] Length = 256 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 126/263 (47%), Gaps = 9/263 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N IG+ ++ ++ S ++ I L + +QM ++GV Sbjct: 3 LLNWLESIGRTVINGLSQMGSATLLVWHTIKQLKMI---------NLWHVFQQMAHLGVD 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +P++ L GAV+ Q L +GA+ LM++ RE+G +L V++AGR G+ Sbjct: 54 SLPIISLTLLFAGAVMTLQITDVLITYGAQSTVGGLMAVAMGRELGPILVGVVLAGRVGA 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 AI AEIG+MK+ E+IDA+R M +D V L+ PR+ A ++ +P+L I G V Sbjct: 114 AITAEIGTMKVTEQIDALRVMAVDPVGYLVVPRVVACMVMVPILAFYGVVIGIAGGYFVA 173 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + + + +T+++ GLIK+ I +V +G + + ++G Sbjct: 174 TAIKGLAPSTYLDSIQMFSTISDFTLGLIKSSVFGAVIALVGAYKGMETKMGAEAVGFST 233 Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369 T+ VV SI +V +++ + + Sbjct: 234 TSSVVTSIILVFVLNYFLSTLLY 256 >gi|94987489|ref|YP_595422.1| ABC-type transport system involved in resistance to organic solvents, permease component [Lawsonia intracellularis PHE/MN1-00] gi|94731738|emb|CAJ55101.1| ABC-type transport system involved in resistance to organic solvents, permease component [Lawsonia intracellularis PHE/MN1-00] Length = 386 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 87/365 (23%), Positives = 164/365 (44%), Gaps = 7/365 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 F+GNW+ + A +N + + +++ D+ ++ F++ K Sbjct: 29 ISFSGNWQLNQPIPDATRFASQLNYPV-VKELYLKTNSLGIWDSS----LIAFIKTLINK 83 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + Q ++ + +L + I + + + + + + +IG + + Sbjct: 84 AQSQQITINDHELPAGIKNLIQLAFQTPPNKEAHKKTTQISFLEYIGDITLSLPSTIQKI 143 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + +T ++ R M GV +P+V LIS + G ++A G Sbjct: 144 LTFLGEMTLSTKRLITGHSD--CSSTNIWRCMQQAGVEALPIVSLISLLVGLILAFVGVI 201 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 QL FGAEI+ L++I R +G ++T V+++GR+G++ A IG+M +NEEIDA+ T G Sbjct: 202 QLRMFGAEIYVSSLVAIGMTRIMGAVMTGVILSGRTGASYAATIGTMNVNEEIDALMTFG 261 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + L+ PR+ AL PLL + ++F ++G IV I + + L Sbjct: 262 IRPSDFLVMPRLIALTTMTPLLVVYSDFMGMLGGFIVGVGVLGIEPLEYINFTQKGFALK 321 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 N++ G+I I I +G G +++++G T+ VV SI ++I + I + Sbjct: 322 NLWVGIIHGIAFGIIIAITGCYQGLNSGKNASAVGLATTSAVVYSIVGIVIATACLTIIF 381 Query: 369 FAIGI 373 I Sbjct: 382 NIFNI 386 >gi|209526324|ref|ZP_03274853.1| protein of unknown function DUF140 [Arthrospira maxima CS-328] gi|209493253|gb|EDZ93579.1| protein of unknown function DUF140 [Arthrospira maxima CS-328] Length = 261 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 65/236 (27%), Positives = 114/236 (48%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + G+ + K + + QM VG + + +L + G V Q A + GA Sbjct: 21 LFLGGQVLLHILQGKIHRRNTLEQMAIVGPESLFIALLTASFVGMVFTIQVAQEFITLGA 80 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 ++++ RE+ +LT+V+IAGR SA AE+G+M++ E+IDA+ M D V L Sbjct: 81 GHLVGGILALSLSRELTPVLTSVIIAGRVCSAFAAELGTMRVTEQIDALYIMKTDPVDYL 140 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PR+ A + LPLLTI+ + + G ++ +Y+IP +F L ++ + I Sbjct: 141 VIPRVLACSLMLPLLTIICLITGLAGGLLIATSFYNIPSVLFLDSIRDLMGLWDLISAEI 200 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 K+ AI ++ G + +G+ TT VV S+ + I+D + F + Sbjct: 201 KSLVFGWAIAVIGTSWGLTTTGGAKGVGQSTTTAVVTSLLAIFILDFFLSWLLFKV 256 >gi|167645294|ref|YP_001682957.1| hypothetical protein Caul_1329 [Caulobacter sp. K31] gi|167347724|gb|ABZ70459.1| protein of unknown function DUF140 [Caulobacter sp. K31] Length = 270 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 72/251 (28%), Positives = 121/251 (48%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + + ++G V ++ FL L RQ +G +PVV L + Sbjct: 15 IRALGRSTLAAVRMVGGVGVFAVRGTVAALTPPWFLGQLWRQFVAIGFFSLPVVGLTAVF 74 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TGA +A +F AE ++++ RE+G +L A+M+AGR +AI AEIG+M+ Sbjct: 75 TGAALALNIFTGGGRFNAEQVMPQIVALGITRELGPVLAALMLAGRVSAAIAAEIGAMRA 134 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+RT+ D R L+ PR+ A ++ LP+LT +A+ + G +V + D AV+ Sbjct: 135 TEQIDAMRTLSTDPFRYLVGPRLLAGVLMLPILTAVADTIGVAGGWLVATRVLDFSSAVY 194 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 ++ +GLIKA + ++ G+ + +G+ T VV S ++ Sbjct: 195 IRNTLDFLQGWDVISGLIKAAVFGFIVALMGCYHGYNAKGGARGVGRATTHAVVSSAILI 254 Query: 358 IIIDSLFAIFY 368 D L F+ Sbjct: 255 FASDYLLTTFF 265 >gi|83748206|ref|ZP_00945233.1| toluene tolerance protein TTG2B [Ralstonia solanacearum UW551] gi|207721840|ref|YP_002252278.1| abc-type transport system involved in resistance to organic solvents, permease component protein [Ralstonia solanacearum MolK2] gi|207744518|ref|YP_002260910.1| abc-type transport system involved in resistance to organic solvents, permease component protein [Ralstonia solanacearum IPO1609] gi|300702838|ref|YP_003744439.1| hypothetical protein RCFBP_10489 [Ralstonia solanacearum CFBP2957] gi|83725174|gb|EAP72325.1| toluene tolerance protein TTG2B [Ralstonia solanacearum UW551] gi|206587007|emb|CAQ17591.1| abc-type transport system involved in resistance to organic solvents, permease component protein [Ralstonia solanacearum MolK2] gi|206595924|emb|CAQ62851.1| abc-type transport system involved in resistance to organic solvents, permease component protein [Ralstonia solanacearum IPO1609] gi|299070500|emb|CBJ41795.1| conserved membrane protein of unknown function, DUF140 [Ralstonia solanacearum CFBP2957] Length = 255 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 63/262 (24%), Positives = 127/262 (48%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG + I+ A +L ++ + LI Q+ ++G Sbjct: 1 MISSIGFLVRVLISRLGYAARMLMALLGAWRDVLRRP-------RLLIEQLRFIGNDSFI 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK NEE+ A+ M +D + +++PR W I++PLL + + I+G V Sbjct: 114 AEIGLMKANEELIAMEMMAVDPLARVLAPRFWGGFIAMPLLAAIFSAVGIVGGYFVGVGL 173 Query: 290 YDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + + ++ G+IK+ A+ VA+ +G+ + + T Sbjct: 174 IGVDPGAFWSQMQAGVDVVDDVINGVIKSVVFGVAVTFVALYQGYEAKATPEGVSRATTR 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D + F+ Sbjct: 234 TVVIASLAVLALDFVLTALMFS 255 >gi|226953846|ref|ZP_03824310.1| toluene tolerance efflux ABC transporter membrane protein [Acinetobacter sp. ATCC 27244] gi|294651661|ref|ZP_06728964.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Acinetobacter haemolyticus ATCC 19194] gi|226835406|gb|EEH67789.1| toluene tolerance efflux ABC transporter membrane protein [Acinetobacter sp. ATCC 27244] gi|292822440|gb|EFF81340.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Acinetobacter haemolyticus ATCC 19194] Length = 258 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 72/263 (27%), Positives = 132/263 (50%), Gaps = 9/263 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G+ +++ I + + +L ++ + KG I QMY VGV + Sbjct: 2 NTIAWLGRLVIERIKGIGAASLMLLQILFSM--------PSKGGFQRFIYQMYRVGVMSL 53 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG L G+E ++S+ LRE+ ++ A++ AGR+GSA+ Sbjct: 54 LIISVSGLFIGLVLGLQGYSILVNVGSEAMLGTMVSLTLLRELAPVVAALLFAGRAGSAL 113 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIGSMK +E++ ++ +G+D ++ ++SPR+WA I+SLP+LT++ I+G +V Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIVGGKLVGVD 173 Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + F+ S+ ++ G+IK+ A VA+ +G+A + +T Sbjct: 174 FLGVDEGSFWGGMQSSVQFGHDVVNGIIKSIVFALICTWVAVYQGYACDPTPEGIATSMT 233 Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370 VV S V+ D + F Sbjct: 234 RTVVYSSLCVLGFDFVLTAVMFG 256 >gi|289207570|ref|YP_003459636.1| hypothetical protein TK90_0385 [Thioalkalivibrio sp. K90mix] gi|288943201|gb|ADC70900.1| protein of unknown function DUF140 [Thioalkalivibrio sp. K90mix] Length = 260 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 67/257 (26%), Positives = 120/257 (46%), Gaps = 1/257 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I S + + G + AS + Q+Y VGV + ++I+ Sbjct: 4 AIASLGRSSLNALVVFGRAFLFLLQVLASLDIVIRRFGLTVVQIYSVGVRSLLIIIVSGL 63 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L FGA ++++ +RE+G ++TA++ AGR+GSA+ AE+G MK Sbjct: 64 FVGMVLGYQGYITLVNFGAAEALGGVVALSLVRELGPVVTALLFAGRAGSALTAELGLMK 123 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ A+ M ++ R + +PR A +S+PLL + + ++G IV + Sbjct: 124 TTEQLSAMEMMAVNPYRRIFAPRFVAGFLSMPLLAAIFSAVGVMGGYIVGVGMLGVDSGA 183 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 +FS+ S ++ +G+IK+ + +A+ +GF S + + T VV S Sbjct: 184 YFSQMQSVTDWNEDVLSGVIKSIVFGFVVTWIAVFQGFNAMPTSEGISRATTQTVVVSSL 243 Query: 356 IVIIIDSLFAIFYFAIG 372 V+ +D + F G Sbjct: 244 AVLGLDFILTGLMFGTG 260 >gi|146302050|ref|YP_001196641.1| hypothetical protein Fjoh_4314 [Flavobacterium johnsoniae UW101] gi|146156468|gb|ABQ07322.1| protein of unknown function DUF140 [Flavobacterium johnsoniae UW101] Length = 252 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 63/239 (26%), Positives = 114/239 (47%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + +G F + ++Q Y +G +P+V + F+ G V+ Sbjct: 5 LKNTFAQIGNAALFANRFFKEVFIPPYETKEFLKQCYLIGYKSLPLVAITGFIMGLVLTI 64 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q L FGAE + ++++ +REI ++TA++ AG+ S I AE+GSMK+ E+IDA+ Sbjct: 65 QSRPTLVTFGAESWLPGMVALSLIREIAPVITALICAGKISSGIGAELGSMKVTEQIDAM 124 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 ++ L+ RI A + +P+L I A+ IIG I + D+ F + ++ + Sbjct: 125 EVSAINPYNYLVVTRILACTLMVPILVIFADAVGIIGGYAGINIHGDVNFYRYLTQIIQS 184 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +++ IK F IG++ +GF + S+G + VV + + IID + Sbjct: 185 LEFSDLIPATIKTFFFGYFIGMIGCYKGFNAANGTESVGHAANSAVVTASLSIFIIDMV 243 >gi|198282478|ref|YP_002218799.1| hypothetical protein Lferr_0338 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667295|ref|YP_002424668.1| toluene tolerance protein Ttg2B, putative [Acidithiobacillus ferrooxidans ATCC 23270] gi|198246999|gb|ACH82592.1| protein of unknown function DUF140 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519508|gb|ACK80094.1| toluene tolerance protein Ttg2B, putative [Acidithiobacillus ferrooxidans ATCC 23270] Length = 260 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 71/265 (26%), Positives = 139/265 (52%), Gaps = 8/265 (3%) Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 +F ++G++ ++ + + + + L L + S + L++Q+Y GV Sbjct: 2 AFMEFIPNLGRRTLRTVPNLGTASRFLLLSLFAVANRHFS-------IQQLLKQVYGFGV 54 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 + ++++ +F TG V+ QG + L +FGA L+++ LRE+G +LTA++ AGR+G Sbjct: 55 RSLLLMMVAAFFTGMVLGFQGYYALVRFGATSALGTLVALSLLRELGPVLTALLFAGRAG 114 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 SA+ AEI SMK E++ A+ M ++ + +++PR+WA I+ +P+L ++ + I G ++ Sbjct: 115 SALTAEISSMKATEQLSAMEMMAVNPLAWVVAPRLWAGILVVPILCVIFDLVGIFGGYLI 174 Query: 286 IWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 + F+++ S + +I TGL KA + +A +G+A + +G Sbjct: 175 SVPVLGVDGGTFWAQMQSNVAFSGDILTGLFKALCFGLVVTWIAAWQGYAAQPTAEGVGN 234 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYF 369 T VV + V+ +D + F F Sbjct: 235 ATTISVVTASLAVLGLDFILTAFLF 259 >gi|317485263|ref|ZP_07944144.1| hypothetical protein HMPREF0179_01497 [Bilophila wadsworthia 3_1_6] gi|316923554|gb|EFV44759.1| hypothetical protein HMPREF0179_01497 [Bilophila wadsworthia 3_1_6] Length = 265 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 67/250 (26%), Positives = 122/250 (48%), Gaps = 5/250 (2%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG E + + +++Q+Y +G + V+ LI+ TG V+ Sbjct: 15 FLRWIDALGDTFLFLLEGLRQIFIAPKLFIKVLQQLYVIGTKSLFVICLIALFTGMVLGL 74 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG + L +FG+ F +S+ +RE+G +LTA+M+ GR+GS++ AEIG M+I ++IDA+ Sbjct: 75 QGYYVLVKFGSVGFLGAAVSLTLIRELGPVLTAIMVTGRAGSSMAAEIGVMRITDQIDAL 134 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M + + L++PR A +I+ PLLT + + IIG + + +F S+ Sbjct: 135 EVMDIPGMGYLVAPRFVASLIAFPLLTAIFDVVGIIGGYLTGVLLLGVNEGAYFHGIESS 194 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCVVQSISIVII 359 + ++ G IK+ A I ++ +G+ G+ ++ T+ VV S V++ Sbjct: 195 VLMPDVTEGFIKSFVFALLIALICCYQGYNAHRRRDGMGPEAVANATTSAVVISCVFVLV 254 Query: 360 IDSLFAIFYF 369 D + Sbjct: 255 ADYVVTSAML 264 >gi|262373545|ref|ZP_06066823.1| toluene tolerance efflux transporter [Acinetobacter junii SH205] gi|262311298|gb|EEY92384.1| toluene tolerance efflux transporter [Acinetobacter junii SH205] Length = 258 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 71/263 (26%), Positives = 132/263 (50%), Gaps = 9/263 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G+ +++ + + + +L ++ + KG I QMY VGV + Sbjct: 2 NTIAWLGRLVIERVKGIGAASLMLIQILFSM--------PSKGGFQRFIYQMYRVGVMSL 53 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG L G+E ++S+ LRE+ ++ A++ AGR+GSA+ Sbjct: 54 LIISVSGLFIGLVLGLQGYSILVNVGSEAMLGTMVSLTLLRELAPVVAALLFAGRAGSAL 113 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIGSMK +E++ ++ +G+D ++ ++SPR+WA I+SLP+LT++ I+G +V Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIVGGKLVGVD 173 Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + F+ S+ ++ G+IK+ A VA+ +G+A + +T Sbjct: 174 FLGVDEGSFWGGMQSSVQFGHDVVNGIIKSVVFALICTWVAVYQGYACDPTPEGIATSMT 233 Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370 VV S V+ D + F Sbjct: 234 RTVVYSSLCVLGFDFVLTAVMFG 256 >gi|238928172|ref|ZP_04659932.1| ABC superfamily ATP binding cassette transporter permease protein [Selenomonas flueggei ATCC 43531] gi|238884132|gb|EEQ47770.1| ABC superfamily ATP binding cassette transporter permease protein [Selenomonas flueggei ATCC 43531] Length = 255 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 70/252 (27%), Positives = 122/252 (48%), Gaps = 1/252 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + +G V+ GE + + + S+I QM ++G + +V L Sbjct: 5 LESVGAFVLTHLANIGRVVLLYGETMRQVTR-RLRVRSIIYQMAHLGADSLLIVGLTLLF 63 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG V+ Q A + ++GA+ +++I RE+G +L V+ AGR G+AI AE+ +MK+ Sbjct: 64 TGIVLTLQIAHEFIRYGAQSTIGAVIAIGIGRELGPVLVGVVCAGRVGAAITAEVSTMKV 123 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+R M + V LI PR+ A ++ +P+LT+ + ++G Y I F Sbjct: 124 TEQIDALRVMAVSPVNYLIVPRMLACMVVVPILTVFGDVIGVLGGYFTAVYYSGISGYTF 183 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 A + ++ GLIKA F I ++ G + +G VV SI ++ Sbjct: 184 LHSITQYAEIYDMTGGLIKAIFFGNVIAVLGCHYGLNAPGGAEGVGTATMQTVVTSIIVI 243 Query: 358 IIIDSLFAIFYF 369 I++++ F F Sbjct: 244 FILNAVLTFFLF 255 >gi|326800463|ref|YP_004318282.1| hypothetical protein Sph21_3067 [Sphingobacterium sp. 21] gi|326551227|gb|ADZ79612.1| protein of unknown function DUF140 [Sphingobacterium sp. 21] Length = 254 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 73/228 (32%), Positives = 116/228 (50%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG V F +I Q Y VGV +P++ L F+TG V Q L Sbjct: 13 LGNVHHFIMRFFKELVMPPYEFKEIINQCYEVGVKSLPLISLTGFITGIVFTNQSRPSLE 72 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 FGA L++I +R + L+TA++ AG+ GS I AE+GSMK+ E+IDA+ G + Sbjct: 73 DFGATAMLPSLIAIAIVRALAPLVTALIAAGKVGSNIGAELGSMKVTEQIDAMEVSGTNP 132 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 + L+ R+ A I +P+L+ F ++G+ + ++++ + F FF + T T +IF Sbjct: 133 FKFLVVSRVLATTIMIPILSCYTGFVGLMGSFLNVYQHESVSFISFFDQVFETVTFLDIF 192 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 +IKA F IGIV +G+ + +GK VV S+ ++ I Sbjct: 193 QAIIKAAFFGFTIGIVGCYQGYNSSKGTEGVGKAANAAVVASMFLIFI 240 >gi|220917185|ref|YP_002492489.1| protein of unknown function DUF140 [Anaeromyxobacter dehalogenans 2CP-1] gi|219955039|gb|ACL65423.1| protein of unknown function DUF140 [Anaeromyxobacter dehalogenans 2CP-1] Length = 251 Score = 220 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 66/247 (26%), Positives = 115/247 (46%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 ++ G +I GE A +++ ++ QM ++G +V + G Sbjct: 1 MLSRLRDAFEDFGRMILFAGEIVAWAFRPPFRPDQILAQMAFIGAGSAFIVGVTGTFAGM 60 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V Q + L QF AE ++ + RE+ + TA+M+ GR+GSAI E+G+M++ E+ Sbjct: 61 VFGLQMNYALRQFAAEGYTGGSTAFALARELSPVFTALMVTGRAGSAITTELGTMRVTEQ 120 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ TM + ++ L+ PR+ A I+ P+LT+L N GA ++ IP F Sbjct: 121 IDAMETMAVSPIQYLVVPRVVASILMFPVLTMLFNALGYGGAYVMGVFVSGIPEGPFIQH 180 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 +IF GL KA + ++ G+A + +G+ T VV S +++ Sbjct: 181 TREFLGPNDIFHGLGKAVLFGYIVAVITTWRGYAASGGARGVGEGTTRAVVASSVAILVA 240 Query: 361 DSLFAIF 367 D + Sbjct: 241 DYAGTVL 247 >gi|94986675|ref|YP_594608.1| ABC-type transport system involved in resistance to organic solvents, permease component [Lawsonia intracellularis PHE/MN1-00] gi|94730924|emb|CAJ54287.1| ABC-type transport system involved in resistance to organic solvents, permease component [Lawsonia intracellularis PHE/MN1-00] Length = 266 Score = 220 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 78/259 (30%), Positives = 128/259 (49%), Gaps = 5/259 (1%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + ++ + S LG + E + IRQ+Y +G + V+ LI Sbjct: 7 QLVILLGQWTISICITLGEIFLFLLEGFRQIFITPKLCSKAIRQIYVIGTKSLFVISLIG 66 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 TG V+ QG + L +FG+ F +S+ +RE+G +LTA+MI R+GS++ AEIG M Sbjct: 67 LFTGMVLGLQGYYVLIKFGSVGFLGSAVSLTLIRELGPVLTAIMIIARAGSSMTAEIGVM 126 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 +I ++IDA+ M + + L+SPRI A +IS PLLT + + IIG + + Sbjct: 127 RITDQIDALEVMDIPGIGYLVSPRIVASLISFPLLTAVFDVIGIIGGYLTGVCLLGVNEG 186 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCV 350 +FS S+ TL++I G IKA A + ++ +G+ G ++ T+ V Sbjct: 187 AYFSSIESSTTLSDINEGSIKALTFAILVILICCYKGYNAHRRRDGRGPEAVANATTSAV 246 Query: 351 VQSISIVIIIDSLFAIFYF 369 V S +V+I D + Sbjct: 247 VVSCVLVLIADYVVTSAML 265 >gi|56476144|ref|YP_157733.1| organic solvent resistance ABC transporter permease [Aromatoleum aromaticum EbN1] gi|56312187|emb|CAI06832.1| predicted ABC-type transport system involved in resistance to organic solvents, permease component [Aromatoleum aromaticum EbN1] Length = 264 Score = 220 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 64/266 (24%), Positives = 129/266 (48%), Gaps = 8/266 (3%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 N L +G + + A GL++ +G+ + IR++Y+ G Sbjct: 2 NGLLALVRRLGGAVTDAVWRLGFAARFFGLLLLYSGQSLLRVH-------LTIREVYFSG 54 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V + ++++ G V+ QG L +FG+ L+++ RE+G ++ A++ A R+ Sbjct: 55 VLSLLIIVVSGLFVGMVLGLQGYETLQRFGSGDALGVLVALSLTRELGPVVAALLFASRA 114 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 GSA+ AEIG MK E++ A+ M ++ + +++PR W +IS+PLL L + + G + Sbjct: 115 GSAVTAEIGLMKATEQLKAMDMMAVNPIARVVAPRFWGGVISMPLLAALFSAMGVFGGWL 174 Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 + + F+S+ + ++ G+IK+ A+ ++A+ EG+ + + Sbjct: 175 IGVVLIGVDEGAFWSQMQAAVDFRFDVVNGVIKSVVFGAAVSLIAVFEGYDCTPTAEGVS 234 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYF 369 + +T VV S ++ +D + F F Sbjct: 235 RAITRTVVSSALAILALDFVLTSFMF 260 >gi|284049033|ref|YP_003399372.1| protein of unknown function DUF140 [Acidaminococcus fermentans DSM 20731] gi|283953254|gb|ADB48057.1| protein of unknown function DUF140 [Acidaminococcus fermentans DSM 20731] Length = 260 Score = 220 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 71/261 (27%), Positives = 123/261 (47%), Gaps = 9/261 (3%) Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171 +G+K+V + ++ G ++RQM +G +P+V Sbjct: 8 RWVGRKMVDLCARTGRVVNLFLEACRAAGTADRR---------EVLRQMARLGADSLPIV 58 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 + TG V++ Q A + +FGA +++I RE+ +LT V++AGR G+AI AE Sbjct: 59 SMTILCTGMVMSVQTAKEFVRFGAADSVGGIVAIAMGRELSPILTGVVVAGRIGAAIAAE 118 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 IG+MK+ E+IDA+R M + +R L++PR+ A+++ +P+L + AN +G V Y Sbjct: 119 IGTMKVTEQIDALRVMAVSPIRFLVTPRLLAIVLMMPVLVVYANLVGDVGGWFVAENYAG 178 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 I +F +I GLIK I + +G + +G T VV Sbjct: 179 ISSHMFLESIRGFIEPWDIIGGLIKGAVFGAIIATIGCHKGLNAQQGAEGVGMATTKSVV 238 Query: 352 QSISIVIIIDSLFAIFYFAIG 372 SI ++ I + ++ + G Sbjct: 239 LSIILIFIANYFLSVILYVHG 259 >gi|30250308|ref|NP_842378.1| hypothetical protein NE2383 [Nitrosomonas europaea ATCC 19718] gi|30181103|emb|CAD86295.1| Domain of unknown function DUF140 [Nitrosomonas europaea ATCC 19718] Length = 271 Score = 220 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 64/266 (24%), Positives = 126/266 (47%), Gaps = 8/266 (3%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 + + IG ++ I + LV+ + + R++Y+ G Sbjct: 9 KRIRTIIESIGHRVADSIWRLGCATRFVLLVLLKSLPSFLR-------FHLITREIYFAG 61 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V + ++++ G V+ QG L +FG+E L+++ +RE+G ++ A++ A R+ Sbjct: 62 VLSLIIILVSGLFVGMVLGLQGYETLQKFGSESAVGTLVALSLVRELGPVIAALLFASRA 121 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 GSA+ AEIG MK E++ A+ M +D + +++PR W + S+PLL + + + G + Sbjct: 122 GSAMTAEIGLMKATEQLAAMGMMAVDPIARIVAPRFWGGVFSMPLLAAMFSVMGVFGGYL 181 Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 V + + F+S+ ++ +I G+IK+ F + +A+ EGF + + Sbjct: 182 VTVVFIGVDEGSFWSQMQNSVDFRYDIVNGVIKSCFFGVVVTAIAVFEGFDAPPTAEGVS 241 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYF 369 T VV S ++ +D + F F Sbjct: 242 GATTRTVVTSSLAILGLDFVLTAFMF 267 >gi|242310202|ref|ZP_04809357.1| ABC transporter [Helicobacter pullorum MIT 98-5489] gi|239523499|gb|EEQ63365.1| ABC transporter [Helicobacter pullorum MIT 98-5489] Length = 365 Score = 220 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 100/381 (26%), Positives = 169/381 (44%), Gaps = 26/381 (6%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAIT---------EID 51 M++ R G W I+KSI S + L+ + ++D Sbjct: 1 MTKKENATLRLDGIWDY------------RISKSILSQLQAIKLTNVKINIVLGEHFDLD 48 Query: 52 TIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLH 111 G +++ F+ + + ++ + Q + + P + + +H Sbjct: 49 FCGGGVLLEFVTELESQQRIL---ENQLQQNPKSQKIFKILSTKEIPSNTNLTQNIIKIH 105 Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171 I I LG ++ + + L + + + V +V Sbjct: 106 SDSFIIIKNNIKTLILSLGFLGEILYTFLASFINFKSIR--LKATFYFIQESLIKAVGIV 163 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 L F+ G VIA QG+ QL QFGA I +++ S+L LRE+ ++TA++IAGRS SA AE Sbjct: 164 ALACFLIGIVIAYQGSIQLRQFGASILIVEMSSMLTLREMAPIITAIIIAGRSASAFSAE 223 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 IG M+ +EIDA+R MG + + L+ PR+ AL LPL+ +A+ ++G+ V D Sbjct: 224 IGMMRATQEIDAMRVMGFNPMTFLVVPRMLALCCVLPLVVFIADLFGLVGSMFVCQIQLD 283 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 I F RF + + + G+ KAPF I + GF+V + S+G T VV Sbjct: 284 ISTEQFLERFLQMVDMRHFWVGIAKAPFFGLIISFIGCFHGFSVAKDTRSIGVHTTKSVV 343 Query: 352 QSISIVIIIDSLFAIFYFAIG 372 +SI VI D++ ++ + +G Sbjct: 344 ESIFFVIAFDAICSVIFTEMG 364 >gi|262042753|ref|ZP_06015907.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259039978|gb|EEW41095.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 260 Score = 220 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++I+ Sbjct: 5 ALAALGHRGIKTTATFGRAGLMLFNAVVGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGL 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGSVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLTI+ I G ++V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGALVGVSWKGIDGGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F++ + ++ LIK+ A + +A+ G+ S + + T VV + Sbjct: 185 FWTAMQNAVDWRMDLVNCLIKSLVFAITVTWIALFNGYDAVPTSAGISRATTRTVVHASL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|329113573|ref|ZP_08242353.1| Putative ABC transporter permease protein [Acetobacter pomorum DM001] gi|326697095|gb|EGE48756.1| Putative ABC transporter permease protein [Acetobacter pomorum DM001] Length = 385 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 79/375 (21%), Positives = 158/375 (42%), Gaps = 16/375 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + +G+ G W A + ++ +++ D+ + Sbjct: 24 TADGVC-LNVEGAWTVQAGG--ATPFPQDKLPIEPGHTLHINTTSLKNWDSAFVAFLWDV 80 Query: 62 ME---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + K Q + ++L +L+ + + + + + + +G Sbjct: 81 KQAASKAQLHFDEQNLPAPAQRLLALL--------PDAPAEPAQPPRNNEGIFARVGDMT 132 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + + ++ + + + + + + L+ ++ G + +V +++F+ Sbjct: 133 LNGLTETGTVSELALDTAKGAAQAVRGKSAMR--MKDLLLDIWNAGPDALLIVGIVNFLV 190 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA++A G +L +F AEI+ DL+ I REI ++TA+++AGR+G A A I +M N Sbjct: 191 GAILAFVGLVELRKFAAEIYVTDLVGIACAREISAIMTAIIMAGRTGGAYAARISTMLGN 250 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA++ G+ ++ P I +L + +PLL + AI G V D+ ++ Sbjct: 251 EEIDALQVFGIPISSYILLPSIVSLALMMPLLYLYGTIVAIFGGFAVSMSMMDVSPIGYW 310 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 L G IK+ F A I + A + G G + +G T VV I +I Sbjct: 311 ISTFDGVELKEFIFGFIKSFFFASFIALAACRVGLKAGRSAADVGIAATRAVVIGIVGII 370 Query: 359 IIDSLFAIFYFAIGI 373 +D++FA+ A+GI Sbjct: 371 AMDAIFAVIANALGI 385 >gi|282899746|ref|ZP_06307709.1| protein of unknown function DUF140 [Cylindrospermopsis raciborskii CS-505] gi|281195361|gb|EFA70295.1| protein of unknown function DUF140 [Cylindrospermopsis raciborskii CS-505] Length = 264 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 70/261 (26%), Positives = 124/261 (47%), Gaps = 6/261 (2%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + I K + +A LG G+ + K + + Q+ VG + Sbjct: 1 MSQTISKSSLGLWGQRLVEAIFLG------GQVTLHLLRGKIHRRNTLEQLAVVGPDSLF 54 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 + +L + GAV Q A + FGA ++++ RE+ +LTAV++AGR GSA Sbjct: 55 IALLTAIFVGAVFTIQVAREFINFGAGNLVGGVLAVALTRELSPVLTAVILAGRVGSAFA 114 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG+M++ E+IDA+ + D + L+ PR+ A ++ LP+LT+L+ + + G I+ Sbjct: 115 AEIGTMRVTEQIDALLMLKTDPIDFLVIPRLLACLLMLPILTLLSLVTGMWGGLIIATNL 174 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 Y++ VF + L +I + +IKA I I+ G + +G+ TT Sbjct: 175 YNLSDTVFLDSARNFLDLRDITSAMIKAACFGILIAIIGCSWGLTTTGGAKGVGQSTTTA 234 Query: 350 VVQSISIVIIIDSLFAIFYFA 370 VV ++ ++ I + + F Sbjct: 235 VVTALLVIFISNFFLSWLMFQ 255 >gi|197122403|ref|YP_002134354.1| hypothetical protein AnaeK_1997 [Anaeromyxobacter sp. K] gi|196172252|gb|ACG73225.1| protein of unknown function DUF140 [Anaeromyxobacter sp. K] Length = 251 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 66/247 (26%), Positives = 115/247 (46%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 ++ G +I GE A +++ ++ QM ++G +V + G Sbjct: 1 MLSRLRDAFEDFGRMILFAGEIVAWAFRPPFRPDQILAQMAFIGAGSAFIVGVTGTFAGM 60 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V Q + L QF AE ++ + RE+ + TA+M+ GR+GSAI E+G+M++ E+ Sbjct: 61 VFGLQMNYALRQFAAEGYTGGSTAFALARELSPVFTALMVTGRAGSAITTELGTMRVTEQ 120 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ TM + ++ L+ PR+ A I+ P+LT+L N GA ++ IP F Sbjct: 121 IDAMETMAVSPIQYLVVPRVVASILMFPVLTMLFNALGYGGAYVMGVFVSGIPEGPFIQH 180 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 +IF GL KA + ++ G+A + +G+ T VV S +++ Sbjct: 181 TREFLGPDDIFHGLGKAVLFGYIVAVITTWRGYAASGGARGVGEGTTRAVVASSVAILVA 240 Query: 361 DSLFAIF 367 D + Sbjct: 241 DYAGTVL 247 >gi|167587707|ref|ZP_02380095.1| hypothetical protein BuboB_20349 [Burkholderia ubonensis Bu] Length = 255 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + A + ++ + +Q++++G Sbjct: 1 MISAIGRFVIGGLVRAGYGARMFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D ++ +I+PR+W II++PLL + N ++G V Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKTVIAPRMWGGIITMPLLAAIFNAVGVLGGYFVGVIL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + ++ G++K+ A+ +A+ +G+ + + T Sbjct: 174 IGVDSGAFWSQMQGGVQVWADVGNGVLKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255 >gi|295677863|ref|YP_003606387.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1002] gi|295437706|gb|ADG16876.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1002] Length = 255 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 61/262 (23%), Positives = 132/262 (50%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + ++ + +Q+++VG + Sbjct: 1 MISTIGRSVITGLGTAGYATRFFLRLVLEIFPLLRRP-------RLVTKQIHFVGNYSLV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D V+++I+PR+WA IIS+P+L + + ++G +V Sbjct: 114 AEIGLMKAGEQLTAMEMMAVDPVKVVIAPRLWAGIISMPILAAIFSAVGVLGGYVVGVLL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ S + ++ G++K+ A+ VA+ +G+ + + T Sbjct: 174 IGVDAGAFWSQMQSGVDVWRDVGAGVVKSVVFGLAVTFVALFQGYEAKPTPEGVSRATTR 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVYASLAVLGLDFLLTALMFS 255 >gi|195952560|ref|YP_002120850.1| protein of unknown function DUF140 [Hydrogenobaculum sp. Y04AAS1] gi|195932172|gb|ACG56872.1| protein of unknown function DUF140 [Hydrogenobaculum sp. Y04AAS1] Length = 327 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 105/350 (30%), Positives = 165/350 (47%), Gaps = 27/350 (7%) Query: 24 ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFS 83 + + I+ SI +D+ I ++DT GA ++ +EKY K +L G HIE + Sbjct: 5 KETIEGKIDVSIFIKEHTIDIKDIEKLDTFGAIFVLELLEKYKDK-ELVGKKEHIEFIQK 63 Query: 84 LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFC 143 + K N+K ++ N +IG + + Sbjct: 64 VKELL---KYNNEKTKKDSNINLSLTFLEYIGILVYHSFKNIKDI--------------- 105 Query: 144 ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203 S ++++ G+ + ++ ++SF+ G VIA Q A +L FGA IF ++L+ Sbjct: 106 --------EFESFLKEVESSGIGSLFILAVLSFLVGIVIAYQSANELISFGANIFIVNLI 157 Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263 I RE+G L+T +++AGR S A IG + EEIDAI M + + PRI L Sbjct: 158 GISAFRELGPLITGIILAGRVSSGYTANIGIRNVYEEIDAIEVMSISPYVVFGLPRIITL 217 Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323 + PLL + ++ ++G +I+ DIPF +FF R +F GL+KAPF Sbjct: 218 TLITPLLVLFSSNVMVLGGAIIANTSLDIPFDMFFDRLREVVGFNQVFVGLVKAPFFGAY 277 Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 IG+V GF G + V VV SIS +I+ID+LF+I + IGI Sbjct: 278 IGLVGTYFGFYSGKKPEDVTLNVMKSVVISISGIIVIDALFSIIFAKIGI 327 >gi|118594041|ref|ZP_01551388.1| hypothetical protein MB2181_00195 [Methylophilales bacterium HTCC2181] gi|118439819|gb|EAV46446.1| hypothetical protein MB2181_00195 [Methylophilales bacterium HTCC2181] Length = 261 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 70/266 (26%), Positives = 132/266 (49%), Gaps = 8/266 (3%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 N+ N +G + + + L++ + + + IR++Y+ G Sbjct: 2 NNMLNFIAGVGSSFRSKMTRLGAGTRLFFLILIYSVDSFKR-------IGLTIREIYFTG 54 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V + ++I+ +F G V+ QG + L ++G+ L+++ +RE+G ++TA++ AGR+ Sbjct: 55 VLSLVIIIVSAFFVGMVLGLQGYYTLEKYGSSEAIGVLVALALVRELGPVVTALLFAGRA 114 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 G+AI AEIG MK E++ A+ M + V +I+PR WA +IS+P+L + + I+G Sbjct: 115 GTAITAEIGLMKATEQLSAMEVMAVSPVARIIAPRFWAGMISMPILATIFSMVGILGGYF 174 Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 + + F+S+ + + +I G IK+ A I+A+ EGF + + Sbjct: 175 IAVLVIGVDEGAFWSQMQANVDFSNDIVDGAIKSIVFGFACTIIALFEGFDAPPTAEGVS 234 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYF 369 + T VV S V+ +D + F F Sbjct: 235 RATTRTVVISSLAVLGLDFILTSFMF 260 >gi|34495903|ref|NP_900118.1| ABC transporter permease [Chromobacterium violaceum ATCC 12472] gi|34101758|gb|AAQ58126.1| probable ABC transport system permease protein [Chromobacterium violaceum ATCC 12472] Length = 257 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 69/264 (26%), Positives = 131/264 (49%), Gaps = 8/264 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + +G V + + L ++ N+G+ L IR++Y+ GV Sbjct: 1 MTSPLRRLGHLTVNAVWRLGFASRFLAAILLNSGQSLLR-------LQMTIREIYFAGVM 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++++ G V+ QG L++FG+ ++++ LRE+G +L A++ A R+GS Sbjct: 54 SLIIIVVSGLFVGMVLGLQGYTTLAKFGSADALGAMVALALLRELGPVLAALLFASRAGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++DA+ M ++ + +I+PR WA ++S+P+L L N I G +V Sbjct: 114 AMTAEIGLMKTTEQLDAMSVMAVNPMARVIAPRFWAGVVSMPILAALFNVVGIFGGYLVG 173 Query: 287 WKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + F+S+ L ++ G+IK+ A+ ++A+ EG+ + + Sbjct: 174 VVMIGLDAGTFWSQMQGNVDLHYDVVNGIIKSLVFGIAVTLIAVFEGYDATPTAAGVSAA 233 Query: 346 VTTCVVQSISIVIIIDSLFAIFYF 369 T VV S +++ +D + F F Sbjct: 234 TTRTVVTSALVILALDFVLTAFMF 257 >gi|114330858|ref|YP_747080.1| hypothetical protein Neut_0852 [Nitrosomonas eutropha C91] gi|114307872|gb|ABI59115.1| protein of unknown function DUF140 [Nitrosomonas eutropha C91] Length = 265 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 68/266 (25%), Positives = 128/266 (48%), Gaps = 8/266 (3%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 + + IG ++V I H + LV+ + + R++YY G Sbjct: 3 RRIRIVIESIGHRMVDSIWRLGCATHFMLLVLLKSVPGFLR-------FRLITREIYYAG 55 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V + ++++ G V+ QG L +FG+E L+++ +RE+G ++ A++ A R+ Sbjct: 56 VMSLIIILVSGLFVGMVLGLQGYETLQKFGSESAVGTLVALSLVRELGPVIAALLFASRA 115 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 GSA+ AEIG MK E++ A+ M +D + +++PR W + S+PLL + + + G + Sbjct: 116 GSAMTAEIGLMKATEQLAAMGMMAVDPIARIVAPRFWGGVFSMPLLAAMFSVMGVFGGYL 175 Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 V + + F+S+ S+ +I G+IK+ F + +A+ EGF + + Sbjct: 176 VTVIFIGVDEGSFWSQMQSSVDFRYDIVNGVIKSCFFGVVVTAIAVFEGFDAPPTAEGVS 235 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYF 369 T VV S ++ +D + F F Sbjct: 236 GATTRTVVTSALAILGLDFVLTAFMF 261 >gi|171060067|ref|YP_001792416.1| hypothetical protein Lcho_3393 [Leptothrix cholodnii SP-6] gi|170777512|gb|ACB35651.1| protein of unknown function DUF140 [Leptothrix cholodnii SP-6] Length = 259 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 55/222 (24%), Positives = 113/222 (50%), Gaps = 1/222 (0%) Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210 + Q++++G + ++ + G V+ QG + L ++G+ L+++ +RE Sbjct: 38 RRWRLVFDQIHFLGNHSLAIIGVSGLFVGFVLGLQGYYTLQRYGSSEALGLLVALSLVRE 97 Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 +G ++TA++ AGR+G+A+ AEIG MK E++ A+ M +D ++ +++PR ++++PLL Sbjct: 98 LGPVVTALLFAGRAGTALTAEIGLMKSGEQLAAMEMMAVDPIQRVLAPRFIGGMVAMPLL 157 Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAM 329 + + IIG +V + F+S+ +I G+IK+ A + +A+ Sbjct: 158 AAVFSAVGIIGGWLVGVVMIGVDAGSFWSQMQGGVDVFKDIGNGVIKSVVFALIVTFIAL 217 Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +G+ + + T VV S V+ D + F+I Sbjct: 218 LQGYECQPTPEGVARATTRTVVVSSLAVLAFDFVLTALMFSI 259 >gi|119511793|ref|ZP_01630895.1| hypothetical protein N9414_16364 [Nodularia spumigena CCY9414] gi|119463566|gb|EAW44501.1| hypothetical protein N9414_16364 [Nodularia spumigena CCY9414] Length = 257 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 62/237 (26%), Positives = 113/237 (47%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 + G+ + K + +++ M G + V VIL+S G + Q A +L +F Sbjct: 17 AAVLLFGQVLLHLLQGKTYYRKILQHMVTAGPASVSPVILVSGFAGMIFTIQTARELVRF 76 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 GA ++ RE+ LLTA +IAG+ GSA AEIG+M++ E+IDA+ + + + Sbjct: 77 GALDAVGGAFALAFCRELAPLLTASIIAGQVGSAFAAEIGAMRVTEQIDALYMLKTNPID 136 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 L+ PR+ A I+ +P++ + A I G ++Y++ F S L+++F Sbjct: 137 YLVLPRVIACILMMPIMMVFALIVGISGGVFAASQFYNVDPEAFLESVRSFLQLSDLFMV 196 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 L+K + I G + +G+ TT VV + ++ ++D ++ F Sbjct: 197 LVKGLIFGAIVAINGCSWGLTTKGGAKEVGESATTAVVTTWVLIFMMDFFLSLLMFE 253 >gi|313896753|ref|ZP_07830301.1| putative membrane protein [Selenomonas sp. oral taxon 137 str. F0430] gi|320530066|ref|ZP_08031136.1| hypothetical protein HMPREF9555_01216 [Selenomonas artemidis F0399] gi|312974670|gb|EFR40137.1| putative membrane protein [Selenomonas sp. oral taxon 137 str. F0430] gi|320137499|gb|EFW29411.1| hypothetical protein HMPREF9555_01216 [Selenomonas artemidis F0399] Length = 255 Score = 219 bits (559), Expect = 5e-55, Method: Composition-based stats. Identities = 72/254 (28%), Positives = 124/254 (48%), Gaps = 1/254 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + +G V GE + + + S++ QM ++G + +V L Sbjct: 3 RILEAVGAFVLTHLANIGRVTLLYGETMRQVTR-RLRVRSIVYQMSHLGADSLLIVGLTL 61 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 TG V+ Q A + ++GA+ +++I RE+G +L V+ AGR G+AI AE+ +M Sbjct: 62 LFTGVVLTLQTAHEFIRYGAQSTIGAVIAISIGRELGPVLVGVVCAGRVGAAITAEVSTM 121 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K+ E+IDA+R M + V LI PR+ A + +P+LT+ + + G + Y I Sbjct: 122 KVTEQIDALRVMAVSPVNYLIVPRMLACMCVVPILTVFGDVIGVFGGYLTAVHYSGISAY 181 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F AT+ ++ GLIKA F I ++ G A + +GK VV SI Sbjct: 182 TFTHSITQFATIYDLTGGLIKAIFFGNVIAVLGCHYGLAAPNGAEGVGKATMQTVVTSII 241 Query: 356 IVIIIDSLFAIFYF 369 ++ I++++ F F Sbjct: 242 VIFILNAVLTFFLF 255 >gi|220905696|ref|YP_002481007.1| hypothetical protein Cyan7425_0250 [Cyanothece sp. PCC 7425] gi|219862307|gb|ACL42646.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7425] Length = 248 Score = 219 bits (559), Expect = 5e-55, Method: Composition-based stats. Identities = 68/236 (28%), Positives = 114/236 (48%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 G+ + + + QM VG + V ++ + G V Q A + F Sbjct: 3 AAFLLGGQVFVHLLMGRINRRNTLEQMSVVGPESLLVALITATFVGMVFTIQVAREFINF 62 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 GA +++I RE+ +LTAV++AGR GSA AEIG+M++ E+IDA+ + D V Sbjct: 63 GAVSAVGGVLAIALTRELAPVLTAVILAGRVGSAFAAEIGTMRVTEQIDALYLLSTDPVD 122 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 L+ PR A + LP+LT+LA +A+ G ++ Y IPF++F S L +I++ Sbjct: 123 YLVLPRFLACCLMLPVLTLLALVTAMGGGMLLAESLYGIPFSLFLDSAKSFLELWDIWSA 182 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 ++K+ + I+ G + +G+ T VV S+ + I D + F Sbjct: 183 VLKSIVFGALVAIIGCNWGLTTSGGAKGVGQSTTAAVVISLLSIFIADFFLSWVMF 238 >gi|294056022|ref|YP_003549680.1| protein of unknown function DUF140 [Coraliomargarita akajimensis DSM 45221] gi|293615355|gb|ADE55510.1| protein of unknown function DUF140 [Coraliomargarita akajimensis DSM 45221] Length = 258 Score = 219 bits (559), Expect = 5e-55, Method: Composition-based stats. Identities = 65/256 (25%), Positives = 122/256 (47%), Gaps = 5/256 (1%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I K + + H G + +G + + + L+ ++ +GV VP+V+++ Sbjct: 2 IRKLGQSALATVHEFGEMTVFSGMALSGFIQQRRRSQKLLSAIFEIGVRCVPIVLVVGLF 61 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ Q + L + GAE D + + +RE+G +LTA+M+ G++GSA+ +E+G + Sbjct: 62 AGLVMGLQLYYTLVRLGAEAALGDAIGLSLVRELGPVLTALMVVGQAGSALASELGIQRN 121 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 +E+IDA++TMG++ L+ PR+WA +I P+LT L + I G + + V+ Sbjct: 122 DEQIDALQTMGIEPRGYLVGPRLWAALICFPMLTALFDLIGIYGGYLTGSVLLHVDSGVY 181 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG-----VHSNSLGKKVTTCVVQ 352 ++ + + +++ G IKA + G+ + + T VV Sbjct: 182 WTHVYKSVQWDDVWGGFIKALVFGLLTISICSYRGYYTHLKSSFRGVRGVSQSATRAVVY 241 Query: 353 SISIVIIIDSLFAIFY 368 S V+ D L F Sbjct: 242 SSVAVLAADYLITSFL 257 >gi|218782260|ref|YP_002433578.1| hypothetical protein Dalk_4431 [Desulfatibacillum alkenivorans AK-01] gi|218763644|gb|ACL06110.1| protein of unknown function DUF140 [Desulfatibacillum alkenivorans AK-01] Length = 268 Score = 219 bits (559), Expect = 5e-55, Method: Composition-based stats. Identities = 74/272 (27%), Positives = 127/272 (46%), Gaps = 12/272 (4%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 S F G+K + F+ + L + + ++ Q+ Sbjct: 2 SVFAGVVVEPVSATGRKTIAFVQEMGRMFIFL-------MHSVLHMFTLPFQFVKILTQI 54 Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 +G + VV LI TG V+ Q L+ FG+E + ++E+G +L A+M+ Sbjct: 55 NIIGAQSLYVVSLIGLFTGMVLGLQLYNALANFGSEGMLGTSIVHTLIKEMGPVLAAIMV 114 Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280 R+GSA+ AEIG M+I+EEIDA+ TM ++ +R L+SPR+ A IIS PLLT L + A+ Sbjct: 115 TARAGSAMAAEIGIMRISEEIDALDTMQINPIRFLVSPRLAAAIISFPLLTALFDVIALF 174 Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV----- 335 G + K + A ++ ++ + +I G +KA A + V +G+ Sbjct: 175 GGYLTGCKLKGLNDATYWYTVENSLVMEDINGGFLKAIVFAVIVITVCCYQGYTTHMRPN 234 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 G + + T+ VV S ++++ D + F Sbjct: 235 GFGAKGVSASTTSAVVMSCVLILMADFVLTAF 266 >gi|163784036|ref|ZP_02178993.1| hypothetical protein HG1285_11198 [Hydrogenivirga sp. 128-5-R1-1] gi|159880693|gb|EDP74240.1| hypothetical protein HG1285_11198 [Hydrogenivirga sp. 128-5-R1-1] Length = 248 Score = 219 bits (559), Expect = 5e-55, Method: Composition-based stats. Identities = 67/236 (28%), Positives = 117/236 (49%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G + E + + +I+Q+ +G P++I+ F TG V+ + Sbjct: 11 IGSITLLFLETLKFVFIKPPKIKHIIKQIAVIGADAAPLIIITGFFTGGVLVVETYPTFH 70 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 +F AE L+S+ RE+ +L A+++ RSGSA+ A IG+M+I E+IDA+ + ++ Sbjct: 71 KFNAEFLIGALVSLSLSRELSPVLVALLVTARSGSAMAANIGTMRITEQIDALEVLAVNP 130 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 VR LI+PRI A + +P LTIL+ S I G V + Y + +F + +I Sbjct: 131 VRYLIAPRIIASVFVVPSLTILSIASGIAGGYFVATELYSVNSFMFIEKMKDLTEFYDIL 190 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 G+ K+ + IV+ G+ + +G+ TT VV S +++I+D Sbjct: 191 GGIYKSIAFGVLLTIVSCYFGYVAKGGAEGVGRATTTAVVTSSVLILIVDYFLTAL 246 >gi|88811866|ref|ZP_01127119.1| hypothetical protein NB231_05736 [Nitrococcus mobilis Nb-231] gi|88790750|gb|EAR21864.1| hypothetical protein NB231_05736 [Nitrococcus mobilis Nb-231] Length = 258 Score = 219 bits (559), Expect = 5e-55, Method: Composition-based stats. Identities = 62/250 (24%), Positives = 113/250 (45%), Gaps = 1/250 (0%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 F + + LG +I Q+Y GV + ++++ G Sbjct: 8 FGEQTLAATARLGRGYLFLLRVLLGLPGLLLRPGLVITQIYATGVLSLLIIVVSGLFVGM 67 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+ QG L FGAE L+++ RE+G +++A++ +GR+GSA+ AEIG MK E+ Sbjct: 68 VLGLQGYNTLVNFGAEQSLGVLVALSLTRELGPVVSALLFSGRAGSALTAEIGLMKATEQ 127 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 + + M +D R +++PR+ +I+LPLL + + G V + ++S+ Sbjct: 128 LSGMEMMAVDPERRVVAPRLLGGMIALPLLAAIFTLVGVFGGYFVGTVLLGVDSGAYWSQ 187 Query: 301 FHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 + + ++ G+IK+ + A+ EGF S + + T VV S V+ Sbjct: 188 MQAQVSFTDDVVNGVIKSLVFGFVVSWTAVFEGFDCAPTSEGVSRATTRAVVHSSLAVLG 247 Query: 360 IDSLFAIFYF 369 +D + F Sbjct: 248 LDFILTALMF 257 >gi|255319835|ref|ZP_05361040.1| toluene tolerance efflux transporter [Acinetobacter radioresistens SK82] gi|262380367|ref|ZP_06073521.1| toluene tolerance efflux transporter [Acinetobacter radioresistens SH164] gi|255303154|gb|EET82366.1| toluene tolerance efflux transporter [Acinetobacter radioresistens SK82] gi|262297813|gb|EEY85728.1| toluene tolerance efflux transporter [Acinetobacter radioresistens SH164] Length = 258 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 69/263 (26%), Positives = 129/263 (49%), Gaps = 9/263 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G+ +++ + +L +I + + + I QMY VGV + Sbjct: 2 NAVAWLGRLVIERVRGIGVATLMLLQIIFSLPTWLG--------VKLFIYQMYRVGVMSL 53 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG L G+E ++++ LRE+ ++ A++ AGR+GSA+ Sbjct: 54 LIITVSGLFIGLVLGLQGYSILVNVGSEAMLGTMVALTLLRELAPVVAALLFAGRAGSAL 113 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG MK E++ ++ +G+D ++ ++SPR+WA I+SLP+LT++ I+G +V Sbjct: 114 TAEIGLMKATEQLSSMEMIGVDPLKRIVSPRLWAGIVSLPMLTVIFGAVGILGGKLVGVD 173 Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + F+S S+ ++ G+IK+ A +A+ +G+A S + T Sbjct: 174 FLGVDEGSFWSGMQSSVQFGHDVVNGIIKSTVFALICTWIAVYQGYACEPTSEGIATSTT 233 Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370 VV S V+ D + F Sbjct: 234 RTVVFSSLCVLGFDFVLTAVMFG 256 >gi|225871870|ref|YP_002753324.1| transporter, putative ER-chloroplast lipid translocase (ECLT) family [Acidobacterium capsulatum ATCC 51196] gi|225792942|gb|ACO33032.1| transporter, putative ER-chloroplast lipid translocase (ECLT) family [Acidobacterium capsulatum ATCC 51196] Length = 259 Score = 219 bits (558), Expect = 6e-55, Method: Composition-based stats. Identities = 64/233 (27%), Positives = 120/233 (51%) Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198 T + ++ + ++ Q Y+G+ +P+VIL F TG V+A A L+QFGA Sbjct: 24 TTRALLNLFRRPFYWSDIVFQADYIGIGSLPIVILTGFFTGGVLALNSASTLAQFGATAV 83 Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258 + L+S+ ++E+G +LT++M++GR+ S + +E+GSM + E++DA+R +G D ++ L+ P Sbjct: 84 TGQLVSLSMIKELGPVLTSLMVSGRNASGMASELGSMIVTEQVDAMRALGTDPMKKLVMP 143 Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318 RI A + + LTI+++ +G + V + +F + ++F GLIK Sbjct: 144 RIVATVCMMFFLTIVSDAIGTLGGAFVSGILLGQNTSQYFHTAYQALRYPDVFEGLIKPV 203 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 I + G + +G+ T VV + ++I D + +I Sbjct: 204 IFGFIIATIGCFYGMKTRGGTQGVGRSTTQAVVVASVLIIATDFFISQIVISI 256 >gi|163854451|ref|YP_001628749.1| hypothetical protein Bpet0147 [Bordetella petrii DSM 12804] gi|163258179|emb|CAP40478.1| putative membrane protein [Bordetella petrii] Length = 259 Score = 219 bits (558), Expect = 6e-55, Method: Composition-based stats. Identities = 61/258 (23%), Positives = 131/258 (50%), Gaps = 8/258 (3%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 +G + ++ LG +++ +G + + +Q++++G + ++I+ Sbjct: 8 LGGWVRAQVSGVGFFTRFLGALLARSGIAVSRP-------RLVSQQVHFIGNYSLLIIIV 60 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ AEIG Sbjct: 61 SGMFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIG 120 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 MK E++ A+ M +D +R ++ PR+W II++P+L + + I+G +V + Sbjct: 121 LMKAGEQLAAMEVMAVDPMRRVLVPRLWGGIIAMPVLAAVFSMVGILGGWVVGVLLIGVD 180 Query: 294 FAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 F+S+ S + ++ G++K+ + +VA+ EG+ + + T VV Sbjct: 181 AGAFWSQMQSGVDVWDDVANGVLKSLVFGVTVTLVALYEGWQARPTPEGVARATTRTVVV 240 Query: 353 SISIVIIIDSLFAIFYFA 370 V+ +D L F Sbjct: 241 GSLAVLGLDFLLTALMFG 258 >gi|158337358|ref|YP_001518533.1| hypothetical protein AM1_4236 [Acaryochloris marina MBIC11017] gi|158307599|gb|ABW29216.1| conserved hypothetical protein [Acaryochloris marina MBIC11017] Length = 249 Score = 219 bits (558), Expect = 6e-55, Method: Composition-based stats. Identities = 70/237 (29%), Positives = 116/237 (48%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 I G+ + K + I QM VG + V +L + G V Q A + F Sbjct: 3 AAIFLGGQVVVHLLRGKIHRRNTIEQMAIVGPESLLVALLTASFVGMVFTIQVAREFIAF 62 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 G ++++ RE+ +LTAV+I GR SA AEIG+M++ E+IDA++ + D V Sbjct: 63 GLVQTVGGVLALALTRELAPVLTAVIITGRVCSAFAAEIGTMRVTEQIDALQMLDTDPVD 122 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 L+ PR+ A + LP+LT+++ + + G +V YDIP++VF HS + +I+ Sbjct: 123 YLVVPRLLACTLMLPILTLISLVAGVTGGMVVASVLYDIPYSVFLDSVHSFLGVWDIWNS 182 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +IKA I IV G + +G+ T VV ++ +V + + + F Sbjct: 183 MIKAAIFGGIIAIVGSSWGLTTYGGAKGVGQSTTAAVVTALVMVFMTNFFLSWVMFQ 239 >gi|291613160|ref|YP_003523317.1| hypothetical protein Slit_0691 [Sideroxydans lithotrophicus ES-1] gi|291583272|gb|ADE10930.1| protein of unknown function DUF140 [Sideroxydans lithotrophicus ES-1] Length = 262 Score = 219 bits (558), Expect = 7e-55, Method: Composition-based stats. Identities = 67/266 (25%), Positives = 132/266 (49%), Gaps = 8/266 (3%) Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 + + IGK++V I + A + + +G +R++++ GV Sbjct: 2 AIVSGLRGIGKRVVNAIWRTGYGARFFLMTLLYSGMSFKR-------FRLTVREIFFSGV 54 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 + ++++ G V+ QG L ++G+E L+++ +RE+G +L A++ A R+G Sbjct: 55 MSLIIILVAGMFVGMVLGLQGYETLKRYGSESALGSLVALSLVRELGPVLAALLFASRAG 114 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 SA+ AEIG MK E+I A+ M ++ + +++PR WA +IS+PLL L + + G +V Sbjct: 115 SAMTAEIGLMKATEQISAMELMAVNPIARVVAPRFWAGVISMPLLAALFSAMGVFGGYVV 174 Query: 286 IWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 + F+S+ ++ +I G+IK+ A+ +A+ EG+ + + Sbjct: 175 GVVNIGVDEGSFWSQMQASVDFQHDILNGVIKSLVFGLAVTAIALFEGYDAPPTAEGVSG 234 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370 T VV+S ++++D + F F Sbjct: 235 ATTRTVVESSLAILMLDFILTAFMFQ 260 >gi|293610802|ref|ZP_06693102.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827146|gb|EFF85511.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|325123627|gb|ADY83150.1| toluene tolerance efflux transporter (ABC superfamily, membrane) [Acinetobacter calcoaceticus PHEA-2] Length = 258 Score = 219 bits (558), Expect = 7e-55, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 131/263 (49%), Gaps = 9/263 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G+ +++ I A +L ++ S+ G I QM+ VGV + Sbjct: 2 NTIAWLGRLVIERIRGIGVAALMLLQIVF--------SFPSSGGFGRFIYQMHRVGVMSL 53 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG L G+E ++S+ LRE+ ++ A++ AGR+GSA+ Sbjct: 54 LIITVSGLFIGLVLGLQGYSILVNVGSESMLGTMVSLTLLRELAPVVAALLFAGRAGSAL 113 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIGSMK +E++ ++ +G+D ++ ++SPR+WA ++SLP+LT++ I+G +V Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGVVSLPMLTVIFAAIGIVGGKMVGVD 173 Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + F+S + ++ G+IK+ A +A+ +G+A + +T Sbjct: 174 FLGVDEGSFWSGMQNNVQFGHDVVNGIIKSIVFALLCTWIAVYQGYACDPTPEGIATAMT 233 Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370 VV S V+ D + F Sbjct: 234 RTVVYSSLCVLGFDFVLTAVMFG 256 >gi|294788757|ref|ZP_06753998.1| putative membrane protein [Simonsiella muelleri ATCC 29453] gi|294483239|gb|EFG30925.1| putative membrane protein [Simonsiella muelleri ATCC 29453] Length = 258 Score = 219 bits (558), Expect = 7e-55, Method: Composition-based stats. Identities = 75/263 (28%), Positives = 135/263 (51%), Gaps = 8/263 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +IG K + FI + L ++S + +IRQMY+ GV + Sbjct: 2 NFIQNIGSKTLTFIQILGANTLFLLKILSLLPQNILRP-------RLMIRQMYFSGVLSI 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG QL++F A +++ LRE+G +L A++ A SG A+ Sbjct: 55 LIIAVSGLFVGMVLGLQGYTQLAKFKAADVLGFMVAAALLRELGPVLAAILFASSSGGAM 114 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 +EIG MK E+++A+ M ++ V +++PR WA ++S+PLL + N + I G +V + Sbjct: 115 TSEIGLMKTTEQLEAMNVMAINPVARVVAPRFWAGVVSMPLLASIFNVAGIWGGYLVGVQ 174 Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + VF+S ++ T + ++ GLIK+ A+ ++A+ +GF + + + T Sbjct: 175 WLGLDSGVFWSHMQNSMTFSYDVLNGLIKSMIFGTAVSLIAVYQGFHCRPTAEGILRAST 234 Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370 VV S V+ +D + F FA Sbjct: 235 RTVVSSALTVLALDFILTAFMFA 257 >gi|53720756|ref|YP_109742.1| hypothetical protein BPSL3149 [Burkholderia pseudomallei K96243] gi|53724275|ref|YP_104245.1| ABC transporter permease [Burkholderia mallei ATCC 23344] gi|67641604|ref|ZP_00440380.1| ABC transporter, permease protein [Burkholderia mallei GB8 horse 4] gi|76810397|ref|YP_335067.1| ABC transporter permease [Burkholderia pseudomallei 1710b] gi|83719902|ref|YP_443507.1| ABC transporter permease [Burkholderia thailandensis E264] gi|121601502|ref|YP_994512.1| ABC transporter, permease protein [Burkholderia mallei SAVP1] gi|124386292|ref|YP_001027757.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10229] gi|126441452|ref|YP_001060680.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 668] gi|126450665|ref|YP_001082296.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|126451565|ref|YP_001067964.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|134283213|ref|ZP_01769914.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|167002607|ref|ZP_02268397.1| toluene tolerance ABC transporter, permease protein [Burkholderia mallei PRL-20] gi|167582553|ref|ZP_02375427.1| toluene tolerance ABC transporter, permease protein [Burkholderia thailandensis TXDOH] gi|167721498|ref|ZP_02404734.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei DM98] gi|167740468|ref|ZP_02413242.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 14] gi|167817681|ref|ZP_02449361.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 91] gi|167826076|ref|ZP_02457547.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 9] gi|167847585|ref|ZP_02473093.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei B7210] gi|167896161|ref|ZP_02483563.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 7894] gi|167904546|ref|ZP_02491751.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei NCTC 13177] gi|167912808|ref|ZP_02499899.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 112] gi|167920767|ref|ZP_02507858.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei BCC215] gi|217424760|ref|ZP_03456257.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 576] gi|226198280|ref|ZP_03793851.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|237814076|ref|YP_002898527.1| ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] gi|242317944|ref|ZP_04816960.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|254175241|ref|ZP_04881902.1| ABC transporter, permease protein [Burkholderia mallei ATCC 10399] gi|254180406|ref|ZP_04887004.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 1655] gi|254190369|ref|ZP_04896877.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|254198428|ref|ZP_04904849.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei S13] gi|254201319|ref|ZP_04907683.1| toluene tolerance ABC transporter, permease protein [Burkholderia mallei FMH] gi|254206661|ref|ZP_04913012.1| toluene tolerance ABC transporter, permease protein [Burkholderia mallei JHU] gi|254258882|ref|ZP_04949936.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 1710a] gi|254300642|ref|ZP_04968087.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 406e] gi|254357286|ref|ZP_04973560.1| toluene tolerance ABC transporter, permease protein [Burkholderia mallei 2002721280] gi|257137708|ref|ZP_05585970.1| ABC transporter, permease protein [Burkholderia thailandensis E264] gi|52211170|emb|CAH37159.1| putative membrane protein [Burkholderia pseudomallei K96243] gi|52427698|gb|AAU48291.1| ABC transporter, permease protein [Burkholderia mallei ATCC 23344] gi|76579850|gb|ABA49325.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710b] gi|83653727|gb|ABC37790.1| ABC transporter, permease protein [Burkholderia thailandensis E264] gi|121230312|gb|ABM52830.1| ABC transporter, permease protein [Burkholderia mallei SAVP1] gi|124294312|gb|ABN03581.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10229] gi|126220945|gb|ABN84451.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 668] gi|126225207|gb|ABN88747.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|126243535|gb|ABO06628.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|134245408|gb|EBA45501.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|147747213|gb|EDK54289.1| toluene tolerance ABC transporter, permease protein [Burkholderia mallei FMH] gi|147752203|gb|EDK59269.1| toluene tolerance ABC transporter, permease protein [Burkholderia mallei JHU] gi|148026350|gb|EDK84435.1| toluene tolerance ABC transporter, permease protein [Burkholderia mallei 2002721280] gi|157810484|gb|EDO87654.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 406e] gi|157938045|gb|EDO93715.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|160696286|gb|EDP86256.1| ABC transporter, permease protein [Burkholderia mallei ATCC 10399] gi|169655168|gb|EDS87861.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei S13] gi|184210945|gb|EDU07988.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 1655] gi|217392216|gb|EEC32241.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 576] gi|225929800|gb|EEH25816.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|237505137|gb|ACQ97455.1| ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] gi|238522557|gb|EEP86001.1| ABC transporter, permease protein [Burkholderia mallei GB8 horse 4] gi|242141183|gb|EES27585.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|243061712|gb|EES43898.1| toluene tolerance ABC transporter, permease protein [Burkholderia mallei PRL-20] gi|254217571|gb|EET06955.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 1710a] Length = 255 Score = 218 bits (557), Expect = 7e-55, Method: Composition-based stats. Identities = 57/262 (21%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + + V+ + +Q++++G Sbjct: 1 MISAIGRFVIGGLERTGYATRMFVRVVLEFFSLLRRP-------RLVTKQIHFLGNYSFV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G +++A++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVSALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D ++ +I+PR+WA +I++PLL + + ++G +V Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPLKNVIAPRMWAGVIAMPLLAAIFSAVGVLGGYVVGVLL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + ++ G+IK+ A+ +A+ +G+ + T Sbjct: 174 IGVDPGAFWSQMQGGVEVWADVGNGVIKSVVFGFAVTFIALFQGYEAKPTPEGVSHATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVYASLAVLGLDFLLTALMFS 255 >gi|315122740|ref|YP_004063229.1| ABC transporter [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496142|gb|ADR52741.1| ABC transporter [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 211 Score = 218 bits (557), Expect = 7e-55, Method: Composition-based stats. Identities = 184/211 (87%), Positives = 206/211 (97%) Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 +GV+GVPV+ILISFVTGAVIAQQGAFQLS FGAEIF+IDLMSILQLREIGVLLTAVM+AG Sbjct: 1 MGVTGVPVIILISFVTGAVIAQQGAFQLSNFGAEIFAIDLMSILQLREIGVLLTAVMVAG 60 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 RSGSAIVAEIGSMKINEEID+++T+G+D VR+LISPRIWALIISLPLLTILAN+SAI+GA Sbjct: 61 RSGSAIVAEIGSMKINEEIDSLKTIGIDLVRVLISPRIWALIISLPLLTILANYSAIVGA 120 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 SI++WKYYDIPF+VFF+RFHSTATL N+FTGLIKAPFMACAIGIVAMKEGF VG +S+SL Sbjct: 121 SIIVWKYYDIPFSVFFARFHSTATLGNVFTGLIKAPFMACAIGIVAMKEGFGVGTNSDSL 180 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 GK+VTTCVVQSIS+VIIIDSLFAIFYFAIGI Sbjct: 181 GKRVTTCVVQSISMVIIIDSLFAIFYFAIGI 211 >gi|170077985|ref|YP_001734623.1| hypothetical protein SYNPCC7002_A1371 [Synechococcus sp. PCC 7002] gi|169885654|gb|ACA99367.1| conserved hypothetical protein TIGR00056 [Synechococcus sp. PCC 7002] Length = 264 Score = 218 bits (557), Expect = 8e-55, Method: Composition-based stats. Identities = 66/239 (27%), Positives = 112/239 (46%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 L G+ + + I QM VG + + ++ + G V Q A + Sbjct: 18 LVAATLLGGQVIVHLLRGRFNRRITIEQMAAVGPDSLLIALVTAGFVGMVFTIQVAREFI 77 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 FGA ++ + RE+ +LTAV++AGR GSA AEIG+M++ E+IDA+ + D Sbjct: 78 YFGAGTAVGGVLGLSLSRELAPVLTAVVLAGRVGSAFAAEIGTMRVTEQIDALHILRTDP 137 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 + L+ PR A + LPLLT+L+ + + G I+ Y IP ++F + S +I Sbjct: 138 IDYLVVPRFLACCLMLPLLTVLSLLTGMAGGLIIAINLYQIPQSIFINSAQSFLEYWDII 197 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +IK+ I ++ G + +G+ TT VV S+ + I + + F Sbjct: 198 SAMIKSVVFGGLIAVIGCSWGLTTTGGAKGVGQSTTTAVVTSLLAIFIANFFLSWLMFQ 256 >gi|94312189|ref|YP_585399.1| hypothetical protein Rmet_3258 [Cupriavidus metallidurans CH34] gi|93356041|gb|ABF10130.1| toluene transporter subunit: membrane component of ABC superfamily [Cupriavidus metallidurans CH34] Length = 258 Score = 218 bits (557), Expect = 8e-55, Method: Composition-based stats. Identities = 57/263 (21%), Positives = 129/263 (49%), Gaps = 8/263 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 IG + +F+ + +++ + + Q+++VG + Sbjct: 3 GFFTSIGSTVRQFVGGLGHATRMFLTMLALSPALLRR-------FRLVTDQVFFVGNLSL 55 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG + L++FG+E L+++ +RE+G ++ A++ AGR+G+++ Sbjct: 56 VIIAVSGLFVGFVLGLQGYYTLNRFGSEQALGLLVALSLVRELGPVVAALLFAGRAGTSL 115 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG MK E++ A+ M ++ ++ +I+PR WA +I++P+L + + ++G +V + Sbjct: 116 TAEIGLMKAGEQLSAMEMMAVNPLQRVIAPRFWAGVIAMPVLATIFSALGVLGGYLVGVQ 175 Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + F+S+ + + ++ G+IK+ + +A+ +GF + + T Sbjct: 176 LIGVDAGAFWSQMQNGVDVRADVLNGVIKSFIFGITVTFIALYQGFEAKPTPEGVSRATT 235 Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 236 RTVVLASLAVLGLDFLLTALMFS 258 >gi|262280246|ref|ZP_06058030.1| toluene tolerance efflux transporter [Acinetobacter calcoaceticus RUH2202] gi|262258024|gb|EEY76758.1| toluene tolerance efflux transporter [Acinetobacter calcoaceticus RUH2202] Length = 258 Score = 218 bits (557), Expect = 8e-55, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 131/263 (49%), Gaps = 9/263 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G+ +++ I A +L ++ S+ G I QM+ VGV + Sbjct: 2 NAIAWLGRLVIERIRGIGVAALMLVQIVF--------SFPTTGGFGRFIYQMHRVGVMSL 53 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG L G+E ++S+ LRE+ ++ A++ AGR+GSA+ Sbjct: 54 LIITVSGLFIGLVLGLQGYSILVNIGSESMLGTMVSLTLLRELAPVVAALLFAGRAGSAL 113 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIGSMK +E++ ++ +G+D ++ ++SPR+WA ++SLP+LT++ I+G +V Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGVVSLPMLTVIFAAIGIVGGKMVGVD 173 Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + F+S + ++ G+IK+ A +A+ +G+A + +T Sbjct: 174 FLGVDEGSFWSGMQNNVQFGHDVVNGIIKSIVFALLCTWIAVYQGYACDPTPEGIATAMT 233 Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370 VV S V+ D + F Sbjct: 234 RTVVYSSLCVLGFDFVLTAVMFG 256 >gi|269797585|ref|YP_003311485.1| hypothetical protein Vpar_0522 [Veillonella parvula DSM 2008] gi|282850033|ref|ZP_06259415.1| conserved hypothetical protein [Veillonella parvula ATCC 17745] gi|269094214|gb|ACZ24205.1| protein of unknown function DUF140 [Veillonella parvula DSM 2008] gi|282580222|gb|EFB85623.1| conserved hypothetical protein [Veillonella parvula ATCC 17745] Length = 253 Score = 218 bits (557), Expect = 8e-55, Method: Composition-based stats. Identities = 71/260 (27%), Positives = 125/260 (48%), Gaps = 9/260 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 IG+ ++ ++ S ++ I L + +QM ++GV +P Sbjct: 3 WLESIGRVVINGLSQMGSATLLVWQTIKQLKMI---------NLWHVFQQMAHLGVDSLP 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ L GAV+ Q L +GA+ LM++ RE+G +L V++AGR G+AI Sbjct: 54 IISLTLLFAGAVMTLQITDVLITYGAQSTVGGLMAVAMGRELGPILVGVVLAGRVGAAIT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG+MK+ E+IDA+R M +D V L+ PR+ A +I +P+L I G V Sbjct: 114 AEIGTMKVTEQIDALRVMAVDPVGYLVVPRVVACMIMVPILAFYGVVIGIAGGYFVATVI 173 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 + + + +T+++ GLIK+ I +V +G + + ++G T+ Sbjct: 174 KGLAPSTYLDSIQMFSTISDFTLGLIKSSVFGAVIALVGAYKGMETKMGAEAVGFSTTSS 233 Query: 350 VVQSISIVIIIDSLFAIFYF 369 VV SI +V +++ + F Sbjct: 234 VVTSIILVFVLNYFLSTLLF 253 >gi|238918531|ref|YP_002932045.1| hypothetical protein NT01EI_0581 [Edwardsiella ictaluri 93-146] gi|238868099|gb|ACR67810.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 235 Score = 218 bits (557), Expect = 9e-55, Method: Composition-based stats. Identities = 67/233 (28%), Positives = 116/233 (49%), Gaps = 1/233 (0%) Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198 + L RQ+Y VGV + ++I+ G V+ QG L+ + AE Sbjct: 2 LFSALVGRPEPGKQWPLLRRQLYSVGVQSLLIIIVSGLFIGMVLGLQGYLVLTTYSAEAS 61 Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258 ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +++P Sbjct: 62 LGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVVAP 121 Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKA 317 R WA +IS+PLLT++ I G S+V + I F+S ++ LIK+ Sbjct: 122 RFWAGVISMPLLTVIFVAVGIWGGSVVGVDWKGIDAGFFWSAMQGAVDYRTDLLNCLIKS 181 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 A + +A+ G+ S + + T VV + V+ +D + F Sbjct: 182 LIFAITVMWIALFNGYDAVPTSAGISRATTRTVVHASLAVLGLDFVLTALMFG 234 >gi|294677110|ref|YP_003577725.1| ABC transporter permease [Rhodobacter capsulatus SB 1003] gi|294475930|gb|ADE85318.1| ABC transporter, permease protein [Rhodobacter capsulatus SB 1003] Length = 259 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 58/254 (22%), Positives = 119/254 (46%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G + TG + + + ++ + +G +PVV + +F Sbjct: 5 ALAGLGRTVLAALAGAGRISLFTGAVLSHMLRPPFYSREFLQALLQIGWLSLPVVGMTAF 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 TGA +A Q ++F AE +++I +RE+G +L +M+A R S+I AEIG+MK Sbjct: 65 FTGAALALQIYAGGARFSAESVVPSIVAIGMVRELGPVLGGLMVAARVASSIAAEIGTMK 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 + E+IDA+ T+ + ++ L PR+ A +S+PLL + + ++G ++ + A Sbjct: 125 VTEQIDALVTLSTNPLKYLAVPRVLAATLSVPLLVAVGDVIGVLGGWLIGTERLGFNSAT 184 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 + L ++ +GL+K + ++ G G + +G+ + VV + Sbjct: 185 YIRNTWEYLELWDVGSGLVKGAAFGFLVALMGCYYGMNSGRGAQGVGRATKSAVVAASVA 244 Query: 357 VIIIDSLFAIFYFA 370 ++ + L +F+ Sbjct: 245 ILASNYLLTEVFFS 258 >gi|120609708|ref|YP_969386.1| hypothetical protein Aave_1014 [Acidovorax citrulli AAC00-1] gi|326315802|ref|YP_004233474.1| hypothetical protein Acav_0985 [Acidovorax avenae subsp. avenae ATCC 19860] gi|120588172|gb|ABM31612.1| protein of unknown function DUF140 [Acidovorax citrulli AAC00-1] gi|323372638|gb|ADX44907.1| protein of unknown function DUF140 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 260 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 125/260 (48%), Gaps = 8/260 (3%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172 +G + D A + + G + Q++++G + ++ Sbjct: 8 DVGFATRSLLADMGRAARLFVRLAGLIGPTLQRFGLVR-------DQLHFLGNYSLSIIS 60 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 + G V+ QG + L ++G+ L+++ +RE+G +++A++ AGR+G+++ AEI Sbjct: 61 VSGLFVGFVLGLQGYYTLQRYGSAQALGLLVALSLVRELGPVVSALLFAGRAGTSLTAEI 120 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 G M+ E++ A+ M +D VR +++PR WA +I++PLL + + +IG IV + Sbjct: 121 GLMRAGEQLSAMEMMAVDPVRRILAPRFWAGVIAMPLLAAVFSAVGVIGGWIVGVVMLGV 180 Query: 293 PFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 F+ + S + ++ G++K+ + +A+ +G+ + + T VV Sbjct: 181 DGGAFWGQMQSGVDVWADVGNGVLKSFVFGVTVTFIALLQGYIAKPTPEGVSRATTRTVV 240 Query: 352 QSISIVIIIDSLFAIFYFAI 371 + V+ +D L + F+I Sbjct: 241 MASLTVLGLDFLLTAWMFSI 260 >gi|254442342|ref|ZP_05055818.1| conserved hypothetical protein [Verrucomicrobiae bacterium DG1235] gi|198256650|gb|EDY80958.1| conserved hypothetical protein [Verrucomicrobiae bacterium DG1235] Length = 260 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 70/266 (26%), Positives = 132/266 (49%), Gaps = 12/266 (4%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG++ ++ +++ LG + + + + K + L R ++ +GV VP Sbjct: 1 MISKIGRQSIRLVSE-------LGELAGFSAQASVALPKQRHIFEKLSRAIFEIGVRCVP 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 + +++ TG V+ Q + L++F +E +++ + EIG + TA+MI G++GSA+ Sbjct: 54 ITLIVGLFTGLVLGLQLYYVLAKFSSESLLGQAVALSIILEIGPVFTAIMIVGQAGSALS 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG + E+IDA+ TM +D + L+SPR+WA II+ P+LT + I G + + Sbjct: 114 AEIGIQRNAEQIDALHTMQIDPIGFLVSPRLWAAIIAFPILTTFFDLIGIYGGYLTGVEL 173 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG-----VHSNSLGK 344 + +++R + NI+ GLIKA ++ +G+ + + + Sbjct: 174 LGVDPGAYWNRIFEAVSPQNIYNGLIKALAFGIITTLICAFQGYFTHIKADIPGARGVSQ 233 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370 T VV S +++ D L F A Sbjct: 234 TTTRAVVYSSIAILMFDYLITSFQMA 259 >gi|294793372|ref|ZP_06758517.1| putative membrane protein [Veillonella sp. 6_1_27] gi|294795191|ref|ZP_06760325.1| putative membrane protein [Veillonella sp. 3_1_44] gi|294453983|gb|EFG22358.1| putative membrane protein [Veillonella sp. 3_1_44] gi|294455803|gb|EFG24168.1| putative membrane protein [Veillonella sp. 6_1_27] Length = 254 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 71/263 (26%), Positives = 126/263 (47%), Gaps = 9/263 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + IG+ ++ ++ S ++ I L + +QM ++GV Sbjct: 1 MLSWLESIGRVVINGLSQMGSATLLVWQTIKQLKMI---------NLWHVFQQMAHLGVD 51 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +P++ L GAV+ Q L +GA+ LM++ RE+G +L V++AGR G+ Sbjct: 52 SLPIISLTLLFAGAVMTLQITDVLITYGAQSTVGGLMAVAMGRELGPILVGVVLAGRVGA 111 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 AI AEIG+MK+ E+IDA+R M +D V L+ PR+ A +I +P+L I G V Sbjct: 112 AITAEIGTMKVTEQIDALRVMAVDPVGYLVVPRVVACMIMVPILAFYGVVIGIAGGYFVA 171 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + + + +T+++ GLIK+ I +V +G + + ++G Sbjct: 172 TVIKGLAPSTYLDSIQMFSTISDFTLGLIKSSVFGAVIALVGAYKGMETKMGAEAVGFST 231 Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369 T+ VV SI +V +++ + F Sbjct: 232 TSSVVTSIILVFVLNYFLSTLLF 254 >gi|149202595|ref|ZP_01879567.1| ABC transporter, inner membrane subunit [Roseovarius sp. TM1035] gi|149143877|gb|EDM31911.1| ABC transporter, inner membrane subunit [Roseovarius sp. TM1035] Length = 261 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 121/264 (45%), Gaps = 7/264 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 IG+ ++ + A + + F+ FL +L++ +G Sbjct: 4 ILGFLASIGRTVLSGLAAIGRIALF---AADTISQLARPPFYFREFLHALVQ----IGWL 56 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PVV + + TG +A Q ++F AE +++I RE+G +L +M+A R S Sbjct: 57 SLPVVGMTALFTGGALALQIYAGGARFNAETVVPSIVAIGLTRELGPVLGGLMVAARVAS 116 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 +I AEIG+MK+ E+IDA+ T+ + ++ L PR+ A +++P+L + + I+G +V Sbjct: 117 SIAAEIGTMKVTEQIDALTTLSTNPMKYLTLPRVLAATLAVPVLVGVGDVLGIMGGFLVG 176 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 D A + ++ +GLIK + ++ G G + +G+ Sbjct: 177 VGRLDFSAATYLHNTIDFLETWDVVSGLIKGAAFGFIVALMGCYYGMNSGRGAQGVGRAT 236 Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370 + VV + +++ + L +FA Sbjct: 237 KSAVVAASVLILASNYLLTELFFA 260 >gi|17547680|ref|NP_521082.1| hypothetical protein RSc2961 [Ralstonia solanacearum GMI1000] gi|17429984|emb|CAD16668.1| putative abc-type transport system involved in resistance to organic solvents, permease component abc transporter protein [Ralstonia solanacearum GMI1000] Length = 255 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 62/262 (23%), Positives = 126/262 (48%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG + I+ +L +I + L+ Q+ ++G Sbjct: 1 MISSIGFLVRILISRLGYATRMLLALIGAGRDVLRRP-------RLLVEQLRFIGNDSFI 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK NEE+ A+ M +D + +++PR W I++PLL + + I+G V Sbjct: 114 AEIGLMKANEELIAMEMMAVDPLARVLAPRFWGGFIAMPLLAAIFSAVGILGGYFVGVGL 173 Query: 290 YDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + + ++ G+IK+ A+ VA+ +G+ + + T Sbjct: 174 IGVDAGAFWSQMQAGVDVVKDVLNGVIKSVVFGVAVTFVALYQGYEAKATPEGVSRATTR 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D + F+ Sbjct: 234 TVVIASLAVLALDFVLTALMFS 255 >gi|299065474|emb|CBJ36643.1| conserved membrane protein of unknown function, DUF140 [Ralstonia solanacearum CMR15] Length = 255 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 61/262 (23%), Positives = 126/262 (48%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG + I+ +L ++ + L+ Q+ ++G Sbjct: 1 MISSIGFLVRVLISRLGYATRMLLALLGAGRDVLRRP-------RLLVEQLRFIGNDSFI 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK NEE+ A+ M +D + +++PR W I++PLL + + I+G V Sbjct: 114 AEIGLMKANEELIAMEMMAVDPLARVLAPRFWGGFIAMPLLAAIFSAVGIVGGYFVGVGL 173 Query: 290 YDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + + ++ G+IK+ A+ VA+ +G+ + + T Sbjct: 174 IGVDAGAFWSQMQAGVDVVKDVLNGVIKSVVFGVAVTFVALYQGYEAKATPEGVSRATTR 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D + F+ Sbjct: 234 TVVIASLAVLALDFVLTALMFS 255 >gi|121593173|ref|YP_985069.1| hypothetical protein Ajs_0749 [Acidovorax sp. JS42] gi|222109932|ref|YP_002552196.1| hypothetical protein Dtpsy_0717 [Acidovorax ebreus TPSY] gi|120605253|gb|ABM40993.1| protein of unknown function DUF140 [Acidovorax sp. JS42] gi|221729376|gb|ACM32196.1| protein of unknown function DUF140 [Acidovorax ebreus TPSY] Length = 260 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 60/261 (22%), Positives = 128/261 (49%), Gaps = 8/261 (3%) Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171 H+G + + D A + ++ G+ + Q++++G + ++ Sbjct: 7 THVGYAVRTKLADVGMGARLFARLLGLFGDVMRRPGLVR-------DQVHFLGNYSLSII 59 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 + G V+A QG L +G+ ++++ +RE+G ++TA++ AGR+G+++ AE Sbjct: 60 AMSGLFVGFVLALQGYNVLQLYGSANSLGLVVTLGLVRELGPVVTALLFAGRAGTSLTAE 119 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 IG M+ E++ A+ M +D VR +++PR W +I++PLL ++ N +IG +V Sbjct: 120 IGLMRAGEQLSAMEMMAVDPVRRILAPRFWGGVIAMPLLALVFNAVGVIGGWLVGVVLIG 179 Query: 292 IPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 + F+ + S + ++ G++K+ A+ +A+ +GF + + T V Sbjct: 180 VDGGAFWGQMQSGVDVWKDVGNGIVKSLAFGVAVTFIAVLQGFVAKPTPEGVSRATTRTV 239 Query: 351 VQSISIVIIIDSLFAIFYFAI 371 V + V+ +D + F+I Sbjct: 240 VMASLSVLGLDFVLTALMFSI 260 >gi|149913819|ref|ZP_01902351.1| ABC transporter, inner membrane subunit [Roseobacter sp. AzwK-3b] gi|149812103|gb|EDM71934.1| ABC transporter, inner membrane subunit [Roseobacter sp. AzwK-3b] Length = 261 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 55/264 (20%), Positives = 119/264 (45%), Gaps = 4/264 (1%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + + +G+ + + + + + + + F +L++ +G Sbjct: 1 MRLILSLLGRLGAQVLAMLGAVGRVTLFALETVTHLMRPPFYAREFGHALVQ----IGWL 56 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PVV + + TG +A Q ++F AE +++I RE+G +L +M+A R S Sbjct: 57 SLPVVGMTALFTGGALALQIYAGGARFNAETVVPSIVAIGLTRELGPVLGGLMVAARVAS 116 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 +I AEIG+MK+ E+IDA+ T+ + ++ L PR+ A +++PLL + + I+G +V Sbjct: 117 SIAAEIGTMKVTEQIDALTTLSTNPMKYLTLPRVLAATLAVPLLVGVGDVIGIMGGFLVG 176 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 D + ++ +G+IK + ++ G G + +G+ Sbjct: 177 VGRLDFGAGTYLHNTLDFLETWDVVSGMIKGAVFGFIVALMGCYYGMNSGRGAQGVGRAT 236 Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370 VV + +++ + + +F+ Sbjct: 237 KAAVVAASVLILASNYILTELFFS 260 >gi|77463016|ref|YP_352520.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gi|126461890|ref|YP_001043004.1| hypothetical protein Rsph17029_1122 [Rhodobacter sphaeroides ATCC 17029] gi|77387434|gb|ABA78619.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gi|126103554|gb|ABN76232.1| protein of unknown function DUF140 [Rhodobacter sphaeroides ATCC 17029] Length = 260 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 58/252 (23%), Positives = 116/252 (46%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + +G + G + ++ + L+ + +G +PVV L + Sbjct: 7 IAALGRATLGMLAAVGRIALFAGAVVSHIFRPPFYPRELLTALIQIGWLSLPVVGLTAIF 66 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG +A Q ++F AE +++I RE+G +L +M+A R S+I AEIG+MK+ Sbjct: 67 TGGALALQIYAGGARFSAEAVVPSIVAIGMTRELGPVLGGLMVAARVASSIAAEIGTMKV 126 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+ T+ + ++ L PR+ A +++P+L + + I G +V D A + Sbjct: 127 TEQIDALVTLSTNPLKYLAVPRVLAATLAVPILVAVGDSIGIAGGWLVGVNRLDFNSATY 186 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + ++ +GL+K + ++ G G + +G+ + VV + ++ Sbjct: 187 IKNTTDFLEVWDVGSGLVKGAAFGFIVALMGCYHGMNSGRGAQGVGRATKSAVVAASVLI 246 Query: 358 IIIDSLFAIFYF 369 + + L +F Sbjct: 247 LAANYLLTEVFF 258 >gi|50086238|ref|YP_047748.1| toluene tolerance efflux ABC transporter membrane protein [Acinetobacter sp. ADP1] gi|49532214|emb|CAG69926.1| toluene tolerance efflux transporter (ABC superfamily, membrane) [Acinetobacter sp. ADP1] Length = 258 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 72/263 (27%), Positives = 130/263 (49%), Gaps = 9/263 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G+ +++ + A +L ++ + G I QMY VGV + Sbjct: 2 NAIAWLGRLVIERVRGIGVAALMLLQILFSMPST--------GGFRRFIYQMYRVGVMSL 53 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G VI QG L G+E ++S+ LRE+ ++ A++ AGR+GSA+ Sbjct: 54 LIITVSGLFIGLVIGLQGYSILVNVGSEAMLGTMVSLTLLRELAPVVAALLFAGRAGSAL 113 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIGSMK +E++ ++ +G+D ++ ++SPR+WA I+SLP+LT++ I+G +V Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGILGGKMVGVD 173 Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + F+S S ++ G+IK+ A +A+ +G+A + +T Sbjct: 174 FLGVDEGSFWSGMQSNVQFGHDVVNGIIKSIVFALVCTWIAVYQGYACDPTPEGIATSMT 233 Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370 VV S V+ D + F Sbjct: 234 RTVVYSSLCVLGSDFVLTAVMFG 256 >gi|251771480|gb|EES52057.1| putative integral membrane protein [Leptospirillum ferrodiazotrophum] Length = 253 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 69/250 (27%), Positives = 127/250 (50%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 F I G + ++ + Q+ +G VV++ +F TG Sbjct: 4 DFSGRLVRVPEIAGSLFMMGLSGLRGIFRPSFLGRNFFEQLLRIGADSTLVVVVTAFFTG 63 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A Q +F AE ++++ RE+G ++T++M+ GRSGSA+ AE+GSM+++E Sbjct: 64 MVLALQAWIGFRKFNAEGLVGAVVTLSMTRELGPVITSLMVTGRSGSAMAAELGSMRVSE 123 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +IDA+ T+ +D V L++PR++A +++LPLLT LA+ I G +V K + ++F Sbjct: 124 QIDALETLAVDPVDYLVTPRLYASLVALPLLTALADLVGIGGGYVVAVKLLGLSPHLYFQ 183 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 L + +G++K+ F + + A + GF + +G+ VT VV +++ Sbjct: 184 EISHYVDLHDFISGIVKSVFFGGLLALWACRTGFVASGGAAGVGRAVTFAVVSGSMSILV 243 Query: 360 IDSLFAIFYF 369 +D + F Sbjct: 244 VDYFLTAWLF 253 >gi|51246140|ref|YP_066024.1| toluene ABC-transporter, permease protein [Desulfotalea psychrophila LSv54] gi|50877177|emb|CAG37017.1| related to toluene ABC-transporter, permease protein [Desulfotalea psychrophila LSv54] Length = 262 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 70/255 (27%), Positives = 132/255 (51%), Gaps = 11/255 (4%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 I+ + +++ G+ ++ + ++ ++++G + VVIL F TG Sbjct: 13 AIDRVTNLGRFCLFLLTGIGQIFQKPFQ----IFRIVENIWFIGTKSMAVVILTGFFTGM 68 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A QG + L++FG+ +++ +RE+G +LTA+MI R+GSA+ AEIG+M+I+E+ Sbjct: 69 VLALQGYYALAKFGSAGMLGSAVALTLIRELGPVLTAIMITARAGSAMAAEIGTMRISEQ 128 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +DA++TM ++ V+ + SPR+ A II PLLT + + I G + + ++ R Sbjct: 129 LDALQTMDINPVKFVFSPRLIASIICFPLLTSIFDVVGIFGGLFIATT-LKVNGYIYMYR 187 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV------GVHSNSLGKKVTTCVVQSI 354 H + + +I +G+IK+ A + +G+ G S ++ T VV S Sbjct: 188 VHESVVMEDIRSGIIKSLVFAVVVVSTCCFKGYYAHIQKEGGFGSRAVSLATTNAVVSSS 247 Query: 355 SIVIIIDSLFAIFYF 369 +++I D L Sbjct: 248 VLILIYDYLITYILL 262 >gi|217969318|ref|YP_002354552.1| hypothetical protein Tmz1t_0889 [Thauera sp. MZ1T] gi|217506645|gb|ACK53656.1| protein of unknown function DUF140 [Thauera sp. MZ1T] Length = 262 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 62/266 (23%), Positives = 129/266 (48%), Gaps = 8/266 (3%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 ++ + IG + I L V+ N+G+ + IR++Y+ G Sbjct: 2 SAIASALRRIGALTIDGIWRLGFATRFLFAVLLNSGQSLRRIH-------LTIRELYFSG 54 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V + ++++ G V+ QG L ++G+ ++++ LRE+G ++ A++ A R+ Sbjct: 55 VLSLLIIMVSGLFVGLVLGLQGYDILQRYGSADAVGVMVALSLLRELGPVIAALLFASRA 114 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 GSAI AEIG MK E++ A+ M ++ + +++PR W ++S+PLL L + + G + Sbjct: 115 GSAITAEIGLMKTTEQLKAMDMMAVNPIARVVAPRFWGGVLSMPLLAALFSAMGVFGGWL 174 Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 + + F+S+ + ++ G+IK+ + ++A+ EG+ + + Sbjct: 175 ITVVVIGVDDGAFWSQMQAAVEFRYDVVNGVIKSAVFGTVVSLIAVFEGYDCQPTAEGVS 234 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYF 369 + +T VV S ++ +D + F F Sbjct: 235 RAITRTVVTSALAILALDFVLTSFMF 260 >gi|152996434|ref|YP_001341269.1| hypothetical protein Mmwyl1_2412 [Marinomonas sp. MWYL1] gi|150837358|gb|ABR71334.1| protein of unknown function DUF140 [Marinomonas sp. MWYL1] Length = 260 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 71/261 (27%), Positives = 133/261 (50%), Gaps = 7/261 (2%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170 +G ++ ++ L +FK + L++Q+Y VGV + + Sbjct: 4 IELLGASLLDWLEAVGRAGIFL------VQSIFRLPVRFKESVNLLVKQLYSVGVLSLVI 57 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 +I+ G V++ QG L++FG+E L+++ LRE+ ++TA++ AGR+GS++ A Sbjct: 58 IIVSGAFIGMVLSLQGYSILAKFGSEEAVGQLLALSLLRELSPVVTALLFAGRAGSSLTA 117 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 EIG MK E++ + MG+D +R +I+PR A +I LP+L+++ + S I+G +V ++ Sbjct: 118 EIGLMKATEQLSSFEMMGVDPLRRVIAPRFIAGVICLPILSLIFSASGILGGHLVSVQWL 177 Query: 291 DIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 + F+S + +I GLIKA + + +A+ +G+ S +GK T Sbjct: 178 GVYDGAFWSSMQQSVYFDTDIMNGLIKALCFSVVVTWIAVYQGYECVPTSEGIGKATTRT 237 Query: 350 VVQSISIVIIIDSLFAIFYFA 370 VV ++ +D + F Sbjct: 238 VVLGSLAILALDFILTAAMFG 258 >gi|261379496|ref|ZP_05984069.1| toluene tolerance ABC efflux transporter, permease [Neisseria subflava NJ9703] gi|319638901|ref|ZP_07993659.1| ABC transport inner membrane subunit [Neisseria mucosa C102] gi|284797959|gb|EFC53306.1| toluene tolerance ABC efflux transporter, permease [Neisseria subflava NJ9703] gi|317399805|gb|EFV80468.1| ABC transport inner membrane subunit [Neisseria mucosa C102] Length = 258 Score = 218 bits (555), Expect = 2e-54, Method: Composition-based stats. Identities = 73/262 (27%), Positives = 132/262 (50%), Gaps = 8/262 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G K + FI S +++ +G A IRQ+Y+ GV V Sbjct: 2 NFIRSVGAKTLGFIQSLGSITLFFLQILAKSGTAFARP-------RLSIRQIYFAGVLSV 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 +V + G V+ QG QL++F + +++ LRE+G +L A++ A +G A+ Sbjct: 55 LIVAVSGLFVGMVLGLQGYTQLAKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAM 114 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 +EIG MK E+++A+ M +D V +++PR WA + S+PLL + N + I GA +V + Sbjct: 115 TSEIGLMKTTEQLEAMNVMAVDPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVE 174 Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + +F+S+ + T ++ GLIK+ A+ ++A+ +GF S + + T Sbjct: 175 WLGLDGGIFWSQMQNNITFHYDVLNGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRAST 234 Query: 348 TCVVQSISIVIIIDSLFAIFYF 369 VV S ++ +D + + F Sbjct: 235 RTVVSSALTILAVDFILTAWMF 256 >gi|304437504|ref|ZP_07397462.1| ABC superfamily ATP binding cassette transporter permease protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369554|gb|EFM23221.1| ABC superfamily ATP binding cassette transporter permease protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 255 Score = 218 bits (555), Expect = 2e-54, Method: Composition-based stats. Identities = 70/252 (27%), Positives = 122/252 (48%), Gaps = 1/252 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + +G V+ GE + + + S++ QM ++G + +V L Sbjct: 5 LESVGAFVLTHLANIGRVVLLYGETMRQVTR-RLRVRSIVYQMAHLGADSLLIVGLTLLF 63 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG V+ Q A + ++GA+ +++I RE+G +L V+ AGR G+AI AE+ +MK+ Sbjct: 64 TGIVLTLQIAHEFIRYGAQSTIGAVIAIGIGRELGPVLVGVVCAGRVGAAITAEVSTMKV 123 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+R M + V LI PR+ A ++ +P+LT+ + ++G Y I F Sbjct: 124 TEQIDALRVMAVSPVNYLIVPRMLACMVVVPILTVFGDVIGVLGGYFTAVYYSGISGYTF 183 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 A L ++ GLIKA F I ++ G + +G VV SI ++ Sbjct: 184 LHSITQYALLYDMTGGLIKAIFFGNVIAVLGCYYGLHAPSGAEGVGTATMQTVVTSIIVI 243 Query: 358 IIIDSLFAIFYF 369 I++++ F F Sbjct: 244 FILNAVLTFFLF 255 >gi|260886513|ref|ZP_05897776.1| toluene tolerance ABC efflux transporter, permease [Selenomonas sputigena ATCC 35185] gi|330839644|ref|YP_004414224.1| protein of unknown function DUF140 [Selenomonas sputigena ATCC 35185] gi|260863656|gb|EEX78156.1| toluene tolerance ABC efflux transporter, permease [Selenomonas sputigena ATCC 35185] gi|329747408|gb|AEC00765.1| protein of unknown function DUF140 [Selenomonas sputigena ATCC 35185] Length = 256 Score = 217 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 72/261 (27%), Positives = 118/261 (45%), Gaps = 8/261 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 L IG +++ S +L + +F+ + QM ++GV Sbjct: 4 RLLEKIGSFVLERFEWVGSVILLLAAAVKEMCR----PLRFRH----IFAQMSHLGVDSF 55 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 +V L TG V+ Q A + +FGA+ +++I RE+G +L V+ AGR GSAI Sbjct: 56 AIVSLTMLFTGMVMTLQVAHEFIRFGAQSTIGGVIAIAIGRELGPVLVGVVCAGRVGSAI 115 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEI +MK+ E+IDA+R M + L+ PR+ A + +PLLTI + + G V Sbjct: 116 TAEISTMKVTEQIDALRVMATSPIGYLVVPRMIACMCMVPLLTIFGDVIGVFGGWFVAVH 175 Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 Y I F + H A ++ GLIKA I ++ G + +G+ T Sbjct: 176 YAGIASYTFTNSIHVFAVPHDVTGGLIKAAVFGIVIAVLGAWYGLHAPEGAEGVGRATTK 235 Query: 349 CVVQSISIVIIIDSLFAIFYF 369 VV +I + ++ + + Sbjct: 236 SVVAAIVCIFFLNVFLSFLLY 256 >gi|319942210|ref|ZP_08016526.1| ABC-type transporter [Sutterella wadsworthensis 3_1_45B] gi|319804263|gb|EFW01155.1| ABC-type transporter [Sutterella wadsworthensis 3_1_45B] Length = 259 Score = 217 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 68/264 (25%), Positives = 134/264 (50%), Gaps = 10/264 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 NL +G ++ ++ G V++ G S +I Q++++G Sbjct: 2 IVNLLAQLGSWVLSLLSSVGRFGIFSGRVLARLGGAGLSP---------IISQIHFIGNY 52 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++ + G V+ QG + L +G+E L+++ +RE+G ++TA++ AGR+G+ Sbjct: 53 SLLIISVSGLFVGFVLGLQGYYVLVTYGSEEALGTLVALSLVRELGPVVTALLFAGRAGT 112 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG M+ E++ A+ MG+D +R + +PR IS+P+L ++ + IIGA +V Sbjct: 113 ALTAEIGLMRSGEQLAAMEMMGVDPIRRVFAPRFIGGFISMPILALIFSAVGIIGAWMVG 172 Query: 287 WKYYDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 F+S+ S ++I G +K+ A+ ++A+ +G+A + + + Sbjct: 173 VLLIGTDNGAFWSQMESAVDVFSDICNGFVKSVVFGAAVTLIALYQGWASRPTPDGVARA 232 Query: 346 VTTCVVQSISIVIIIDSLFAIFYF 369 TT VV S +V+ +D + + F Sbjct: 233 TTTTVVVSSLLVLGLDFIMTAWMF 256 >gi|294339439|emb|CAZ87798.1| Toluene tolerance protein Ttg2B [Thiomonas sp. 3As] Length = 261 Score = 217 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 67/265 (25%), Positives = 128/265 (48%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + IG + ++ A + +I G LI+QMY++G Sbjct: 3 VADRLVSIGAGTRQLLSSLGYAARLFARLILLVGRVFMRP-------SLLIQQMYFLGNL 55 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++ + G V+ QG + LS++G+ L+++ +RE+G ++TA++ AGR+G+ Sbjct: 56 SLVIIAVSGLFVGFVLGLQGYYTLSRYGSSSALGVLVALSLVRELGPVVTALLFAGRAGT 115 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 ++ AEIG MK E+I A+ M +D V +++PR WA +I +PLL + + I+G +V Sbjct: 116 SLTAEIGLMKAGEQIAAMEMMAVDPVVRVLAPRFWAGVIVMPLLAAVFSAVGIMGGYVVG 175 Query: 287 WKYYDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + F+S+ S ++ G+IK+ A+ VA+ +G+ + + Sbjct: 176 VVMIGVDAGQFWSQMQSGVDVFKDVGNGVIKSVVFGLAVTFVALLQGWRSQPTPEGVSRA 235 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + V+ +D + F+ Sbjct: 236 TTRTVVIASLAVLALDFVLTAMMFS 260 >gi|152990804|ref|YP_001356526.1| ABC transporter, permease [Nitratiruptor sp. SB155-2] gi|151422665|dbj|BAF70169.1| ABC transporter, permease [Nitratiruptor sp. SB155-2] Length = 263 Score = 217 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 67/265 (25%), Positives = 122/265 (46%), Gaps = 4/265 (1%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + + +++G V+F + I F Y+ K ++QM +GV Sbjct: 1 MEQVFFYLGYPFVQFFRMLERFGAFILFQIKILPLFFKPPYRVK----ETLQQMDIIGVG 56 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + V+ L + TG V A Q +FGAE F + + +E+G + A+M+ R+ S Sbjct: 57 SLFVISLTAIFTGLVEAIQLYHGFHKFGAEEFMGYTIFVSISKELGPVFGALMLVSRAVS 116 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AE+G+M++ E+IDAI T+ +D + LI PR+ A +S P+L I+ F I A ++ Sbjct: 117 AMTAELGTMRVTEQIDAIDTLAVDSKKYLIVPRVIAATLSTPILVIVFVFLGNIAAYLIS 176 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + + + + ++I TG+IKA I I+ G+ + +G Sbjct: 177 VYALGVNPNSYKNTITTYLEFSDIGTGIIKAFVFGYLISIIGTYIGYFTRGGARGVGLST 236 Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371 T VV + V + + + + + Sbjct: 237 TKSVVYAAMTVFVANYFLSTLFLYL 261 >gi|296135334|ref|YP_003642576.1| protein of unknown function DUF140 [Thiomonas intermedia K12] gi|295795456|gb|ADG30246.1| protein of unknown function DUF140 [Thiomonas intermedia K12] Length = 261 Score = 217 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 66/265 (24%), Positives = 128/265 (48%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + IG + ++ A + ++ G LI+QMY++G Sbjct: 3 VADRLVSIGVGTRQLLSSLGYAARLFVRLLWLVGRVFMRP-------SLLIQQMYFLGNL 55 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++ + G V+ QG + LS++G+ L+++ +RE+G ++TA++ AGR+G+ Sbjct: 56 SLVIIAVSGLFVGFVLGLQGYYTLSRYGSSSALGVLVALSLVRELGPVVTALLFAGRAGT 115 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 ++ AEIG MK E+I A+ M +D V +++PR WA +I +PLL + + I+G +V Sbjct: 116 SLTAEIGLMKAGEQIAAMEMMAVDPVVRVLAPRFWAGVIVMPLLAAVFSAVGIMGGYVVG 175 Query: 287 WKYYDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + F+S+ S ++ G+IK+ A+ VA+ +G+ + + Sbjct: 176 VVMIGVDAGQFWSQMQSGVDVFKDVGNGVIKSVVFGLAVTFVALLQGWRSQPTPEGVSRA 235 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + V+ +D + F+ Sbjct: 236 TTRTVVIASLAVLALDFVLTAMMFS 260 >gi|113869373|ref|YP_727862.1| ABC-type transporter, permease component involved in toluene tolerance [Ralstonia eutropha H16] gi|113528149|emb|CAJ94494.1| ABC-type transporter, permease component involved in toluene tolerance [Ralstonia eutropha H16] Length = 259 Score = 217 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 58/265 (21%), Positives = 130/265 (49%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + IG + + ++ + ++ + + Q+++VG Sbjct: 1 MTDFFITIGAAVRRSVSGLGRATRMFLTLLGLSPALLRR-------FRLVTDQVFFVGNL 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+ Sbjct: 54 SLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGT 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 ++ AEIG MK E++ A+ M ++ ++ +I+PR WA +I++P+L + + I+G +V Sbjct: 114 SLTAEIGLMKAGEQLTAMEMMAVNPLQRVIAPRFWAGVIAMPVLAAIFSAVGILGGYVVG 173 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + + F+S+ + ++ G+IK+ A+ +A+ +GF + + Sbjct: 174 VQLIGVDAGAFWSQMQGGVDVRADVLNGVIKSFIFGIAVTFIALYQGFEAKPTPEGVSRA 233 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + V+ +D L F+ Sbjct: 234 TTRTVVIASLAVLGLDFLLTALMFS 258 >gi|325109134|ref|YP_004270202.1| hypothetical protein Plabr_2580 [Planctomyces brasiliensis DSM 5305] gi|324969402|gb|ADY60180.1| protein of unknown function DUF140 [Planctomyces brasiliensis DSM 5305] Length = 271 Score = 217 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 72/273 (26%), Positives = 129/273 (47%), Gaps = 7/273 (2%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 S + + +G+ IV I + A I S L + Sbjct: 2 SIAHEPRTTPIHWLGELIVAPIAAAGDFALFAWATIRWLAIKWPRS-------SVLWPNL 54 Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 Y +GV +PVV++ G V+A Q QL E ++++ ++E+G +L A M+ Sbjct: 55 YQIGVLSLPVVMVTGGFIGMVLAIQTYDQLRLMHMESHLGSVINLALVKELGPVLAATML 114 Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280 AGR GSAI AE+G+M++ E+IDA+ +G D V+ L+ PR ++ +PLLTI+A+ ++ Sbjct: 115 AGRVGSAIAAELGTMRVTEQIDALEALGADPVQYLVVPRFLGCVLLIPLLTIVADTVGML 174 Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 + I ++ ++ TL ++++G++K+ F AI +V+ GF + Sbjct: 175 CGWLFSTSVLGINSYFYWHHTYAYITLFDVYSGIMKSVFFGAAIALVSCHRGFQAKAGAE 234 Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 +G T V S ++ +D L + + I Sbjct: 235 GVGTAATQTFVYSFVCILFLDFLAGMLLSQVYI 267 >gi|319761579|ref|YP_004125516.1| hypothetical protein Alide_0863 [Alicycliphilus denitrificans BC] gi|330823447|ref|YP_004386750.1| hypothetical protein Alide2_0819 [Alicycliphilus denitrificans K601] gi|317116140|gb|ADU98628.1| protein of unknown function DUF140 [Alicycliphilus denitrificans BC] gi|329308819|gb|AEB83234.1| protein of unknown function DUF140 [Alicycliphilus denitrificans K601] Length = 260 Score = 217 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 127/260 (48%), Gaps = 8/260 (3%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172 H+G + + D A + ++ G + Q++++G + ++ Sbjct: 8 HVGYAVRSKLADLGMGARLFVRLVGLFGTAMRRFGLVR-------DQVHFLGNYSLSIIA 60 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 + G V+A QG L +G+ ++++ +RE+G ++TA++ AGR+G+++ AEI Sbjct: 61 MSGLFVGFVLALQGYNVLQLYGSANSLGLVVTLGLVRELGPVVTALLFAGRAGTSLTAEI 120 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 G M+ E++ A+ M +D V+ +++PR W +I++PLL + + +IG +V + Sbjct: 121 GLMRAGEQLSAMEMMAVDPVQRILAPRFWGGVIAMPLLAAVFSAVGVIGGWLVGVVLIGV 180 Query: 293 PFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 F+ + S+ + ++ G++K+ A+ +A+ +G+ + + T VV Sbjct: 181 DGGAFWGQMQSSVDVWKDVGNGVVKSVVFGVAVTFIAVLQGYMAKPTPEGVSRATTRTVV 240 Query: 352 QSISIVIIIDSLFAIFYFAI 371 + V+ +D + F+I Sbjct: 241 MASLTVLGLDFVLTALMFSI 260 >gi|224373004|ref|YP_002607376.1| abc transporter, permease protein [Nautilia profundicola AmH] gi|223589585|gb|ACM93321.1| abc transporter, permease protein [Nautilia profundicola AmH] Length = 259 Score = 217 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 71/263 (26%), Positives = 114/263 (43%), Gaps = 7/263 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + Y IGK + FI ++ + + + Q+ ++G Sbjct: 2 ISDFFYIIGKSAIDFIEGLGKFTIFQLKLLPLFLKPPFR-------IRQIFEQINFMGFG 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + V+ L SF TG V A Q +FG E F + I +E+G + A+M+ R S Sbjct: 55 SLGVIFLTSFFTGLVEAVQLYNGFHKFGVEDFMGYTIFISICKELGPVFAALMVVSRGIS 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A AE+GSM++ E+IDA+ M +D + LI PRI IISLPLL + + A IGA ++ Sbjct: 115 AYAAELGSMRVTEQIDALDVMAVDSKQYLIVPRIIGTIISLPLLILFFDAVANIGAYLIS 174 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 D+ + L + G++K I V G+ + +G Sbjct: 175 VYTLDVNGYTYIENIKQFGELGDFTEGIVKGIVFGYLISAVGTYIGYNTRGGAKGVGVST 234 Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369 T VV S ++ + D + + FY Sbjct: 235 TKAVVISSILIFVADYIVSAFYL 257 >gi|307105433|gb|EFN53682.1| hypothetical protein CHLNCDRAFT_10117 [Chlorella variabilis] Length = 256 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 53/237 (22%), Positives = 116/237 (48%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 + G+ + K + + Q+ VG + V +L + G V Q + ++ Sbjct: 10 AAVVLGGQALVRILQGKIHWKNTLDQLNMVGPRSLGVCLLTAAFVGMVFTIQFIREFAKL 69 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 G ++++ RE+ ++T++++AGR GSA AE+G+M+++E+ D++R +G D V Sbjct: 70 GLTRSVGGVLALALSRELTPVVTSIIVAGRVGSAFAAELGTMQVSEQTDSLRVLGSDPVD 129 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 LI+PR+ A +++ P+L +L + + ++ Y++ V + ++ T Sbjct: 130 YLITPRVMACMVAGPILNLLCFCMGMGASVLLADTVYNVSCNVILDSAMRAISSWDVITS 189 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +IK I V+ G+ + +G+ T+ VV S+ ++ + D ++ +F+ Sbjct: 190 MIKCWVFGTIIATVSCAWGYTTTGGAKGVGESTTSAVVISLVLIFVFDFALSLLFFS 246 >gi|28898136|ref|NP_797741.1| putative ABC transport system permease [Vibrio parahaemolyticus RIMD 2210633] gi|153836560|ref|ZP_01989227.1| ABC-type transport system, permease component [Vibrio parahaemolyticus AQ3810] gi|260366435|ref|ZP_05778874.1| ABC transporter, permease protein [Vibrio parahaemolyticus K5030] gi|260878481|ref|ZP_05890836.1| ABC-type transport system, permease protein [Vibrio parahaemolyticus AN-5034] gi|260897062|ref|ZP_05905558.1| ABC transporter, permease protein [Vibrio parahaemolyticus Peru-466] gi|260901858|ref|ZP_05910253.1| ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037] gi|28806350|dbj|BAC59625.1| putative ABC transport system permease protein [Vibrio parahaemolyticus RIMD 2210633] gi|149750158|gb|EDM60903.1| ABC-type transport system, permease component [Vibrio parahaemolyticus AQ3810] gi|308087695|gb|EFO37390.1| ABC transporter, permease protein [Vibrio parahaemolyticus Peru-466] gi|308091102|gb|EFO40797.1| ABC-type transport system, permease protein [Vibrio parahaemolyticus AN-5034] gi|308108149|gb|EFO45689.1| ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037] gi|308113110|gb|EFO50650.1| ABC transporter, permease protein [Vibrio parahaemolyticus K5030] Length = 357 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 93/356 (26%), Positives = 168/356 (47%), Gaps = 17/356 (4%) Query: 16 KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH---GKIKLQ 72 S + ++ + I +S +V+ S +T +D G + ++ +I + Sbjct: 15 TSAMVGDLWEK-ANDILESYPDSPIVVNASNLTFVDISGVAFLSDLQTRFRPPGAEISII 73 Query: 73 GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHIL 132 G+S + +L + +G + + S + Sbjct: 74 GLSASLAELV----------PPSNIENAPQIPRGEDGFFERVGNATREMLVYVGSVVRFI 123 Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 + + + ++ G VP+++LI F+ G +IA + Q Sbjct: 124 KECVLVFK--LGINRRKNVNWTTVSNIATRAGADAVPIILLIGFLMGVIIAFEIGLVAQQ 181 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 FGA +F D + I RE+G L+TA++ AGR+G+A AEIG+ K+NEEI+A+ T G+ V Sbjct: 182 FGAVLFVADGIGISMFRELGPLMTAIVFAGRTGAAFAAEIGTQKVNEEINALHTFGICPV 241 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 L+ PRI+A ++ LPLLT+LA+ ++G ++V+ K+ DI F ++ + + ++ ++F Sbjct: 242 EFLVIPRIYASVLVLPLLTVLADIIGVLGGALVLLKF-DISFVQYYHQLLNALSVWDLFF 300 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 GLIKA I ++ + G A G S S+G T+ VV SI +++ID F + Sbjct: 301 GLIKATTFGFIIAVIGCERGLATGQGSTSVGLAATSAVVSSIIWIVVIDGFFTVLL 356 >gi|312890492|ref|ZP_07750028.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM 18603] gi|311296950|gb|EFQ74083.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM 18603] Length = 257 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 61/245 (24%), Positives = 119/245 (48%), Gaps = 3/245 (1%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +G + F + + +RQ Y +G + +V + SF+ G V+ Q Sbjct: 12 LMEEVGEQATFFTGFFRNLFTGGFEWSEFVRQCYEIGYRSITLVGITSFIMGVVLTLQSR 71 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L +FGA ++ + +REIG ++TA++ AG+ S I AE+GSMK+ E+IDA+ Sbjct: 72 PTLVKFGASSMLPFMVCVSIIREIGPVITAIICAGKISSGIGAELGSMKVTEQIDAMEVS 131 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G + ++ L+ RI A I +P+LT++ + + G + + + ++F++ S+ Sbjct: 132 GANPMQYLVVTRILATTIMIPILTLMGDVLGLFGGFLAVHFADHTSWQLYFNKCVSSVDF 191 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL---F 364 +++ +IK F A+G + +GF + S+G + VV + + +D + Sbjct: 192 SDLLPAVIKTVFFGFAVGFIGCYKGFNSNRGTESVGIAANSAVVSASLWIFFLDVIAVQI 251 Query: 365 AIFYF 369 +F Sbjct: 252 TQLFF 256 >gi|119946509|ref|YP_944189.1| ABC-type transporter inner membrane protein [Psychromonas ingrahamii 37] gi|119865113|gb|ABM04590.1| ABC-type transporter inner membrane protein [Psychromonas ingrahamii 37] Length = 234 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 63/219 (28%), Positives = 120/219 (54%), Gaps = 1/219 (0%) Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 I Q++ +G+ +P+++ G V++ QG L + AE ++++ LRE+G Sbjct: 15 FPLFIGQIFQLGILSLPIILTAGLFIGMVLSLQGYNVLVDYAAEESLGSMVALSLLRELG 74 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 ++TA++ AGR+GSA+ AEIG M+ E+I ++ M + ++ +I+PR A I++LPLLT+ Sbjct: 75 PVVTALLFAGRAGSALTAEIGLMQSTEQIASMEMMAVSPLKRVIAPRFLAGIVTLPLLTL 134 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKE 331 + N AI G ++ + + ++S + L ++ G+IK+ I VA+ Sbjct: 135 MFNVVAIWGGYLIGVSWMGVDGGAYWSVMQGSVDYLPDVMNGVIKSIVFGVMITWVALYN 194 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+ V ++ + + T VV S +V+ +D + +F F Sbjct: 195 GYYVMPNAIGISRSTTQTVVVSSLLVLAMDFILTVFMFG 233 >gi|73542805|ref|YP_297325.1| hypothetical protein Reut_A3121 [Ralstonia eutropha JMP134] gi|72120218|gb|AAZ62481.1| Protein of unknown function DUF140 [Ralstonia eutropha JMP134] Length = 258 Score = 217 bits (553), Expect = 3e-54, Method: Composition-based stats. Identities = 58/265 (21%), Positives = 130/265 (49%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 IG + + + A + V+ + + Q+++VG Sbjct: 1 MTGFFAAIGSAVRQGVAGLGHAAGMFFTVLGLSPALLRR-------FRLVTDQIFFVGNL 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+ Sbjct: 54 SLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVITALLFAGRAGT 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 ++ AEIG MK E++ A+ M ++ ++ +I+PR WA ++++P+L + + ++G +V Sbjct: 114 SLTAEIGLMKAGEQLTAMEMMAVNPLQRVIAPRFWAGVVAMPVLAAIFSAVGVLGGYLVG 173 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + + F+S+ + + ++ G+IK+ A+ +A+ +GF + + Sbjct: 174 VQLIGVDAGAFWSQMQAGVDVRDDVVNGVIKSFIFGIAVTFIALYQGFEAKPTPEGVSRA 233 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + V+ +D L F+ Sbjct: 234 TTRTVVIASLAVLGLDFLLTALMFS 258 >gi|284036726|ref|YP_003386656.1| hypothetical protein Slin_1812 [Spirosoma linguale DSM 74] gi|283816019|gb|ADB37857.1| protein of unknown function DUF140 [Spirosoma linguale DSM 74] Length = 271 Score = 217 bits (553), Expect = 3e-54, Method: Composition-based stats. Identities = 73/244 (29%), Positives = 123/244 (50%), Gaps = 7/244 (2%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +++ +F+ + +G E Y+FK ++RQ Y VG + ++ Sbjct: 20 RRLDRFLLGLADVSSFIGRFFR---EALLPPYEFK----EIVRQCYEVGFRSLLLISTTG 72 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 F+TG V Q LS+FGA + L++I +R +G L+TA++ AG+ GS+I AE+GSM Sbjct: 73 FITGIVFTNQSRPSLSEFGATSWLPSLIAIAIVRALGPLVTALIAAGKVGSSIGAELGSM 132 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 + E+IDA+ G D + L+ R+ A ++PLLT+ F +IGA I + + F Sbjct: 133 NVTEQIDAMEVSGTDPFKFLVVTRVLATSFTIPLLTMYTIFVGLIGAYINVNQNEQTSFT 192 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F T +IF ++K+ IG+V +G+ + +GK + VV S+ Sbjct: 193 SFMQEVFGAITYLDIFASVLKSIVFGFTIGMVGCYKGYHSSKGTEGVGKAANSAVVTSMF 252 Query: 356 IVII 359 +V I Sbjct: 253 LVFI 256 >gi|146277114|ref|YP_001167273.1| hypothetical protein Rsph17025_1067 [Rhodobacter sphaeroides ATCC 17025] gi|145555355|gb|ABP69968.1| protein of unknown function DUF140 [Rhodobacter sphaeroides ATCC 17025] Length = 260 Score = 217 bits (553), Expect = 3e-54, Method: Composition-based stats. Identities = 56/252 (22%), Positives = 114/252 (45%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + +G + + ++ + + + +G +PVV L + Sbjct: 7 IAALGRATLGALAAIGRIALFAAAVISHLFRPPFYPREFLNALIQIGWLSLPVVGLTAIF 66 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG +A Q ++F AE +++I RE+G +L +M+A R S+I AEIG+MK+ Sbjct: 67 TGGALALQIYAGGARFSAEAVVPSIVAIGMTRELGPVLGGLMVAARVASSIAAEIGTMKV 126 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+ T+ + ++ L PR+ A +++P+L + + I G +V D A + Sbjct: 127 TEQIDALVTLSTNPLKYLAVPRVLAATLAVPVLVAVGDSIGIAGGWLVGVNRLDFNSATY 186 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + ++ +GL+K + ++ G G + +G+ + VV + ++ Sbjct: 187 IKNTVDFLEVWDVGSGLVKGAAFGFIVALMGCYHGMNSGRGAQGVGRATKSAVVAASVLI 246 Query: 358 IIIDSLFAIFYF 369 + + L +F Sbjct: 247 LAANYLLTEVFF 258 >gi|297171834|gb|ADI22824.1| ABC-type transport system involved in resistance to organic solvents, permease component [uncultured Oceanospirillales bacterium HF0500_29K23] Length = 260 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 72/258 (27%), Positives = 130/258 (50%), Gaps = 3/258 (1%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 +G+ + D+ + LG V + S + + L+ Q++++GV VV+L Sbjct: 1 MGRSADNPLKDAFAG---LGSVTVLFLDTVRSIFAKRFRGRDLVEQLHFIGVKSQSVVLL 57 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 TG V+ Q Q + + + ++++ RE+G +LT++MIAGR G+A+ A++G Sbjct: 58 TGAFTGMVMCAQFYIQFHKVKMDSAVMSVVTVAMARELGAVLTSLMIAGRVGAAMAAQLG 117 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 +MK+ E+IDA+RT+ V L++PR+ A++ISLPLLT A +++ +V + Sbjct: 118 TMKVTEQIDALRTLATSPVDYLVAPRLLAMLISLPLLTAEAIAISMVSGMLVAVYLLGLD 177 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 +S +I+ GLIKA A I VA +G G + +GK T VV + Sbjct: 178 PVFLWSNMVFYTGSVDIWMGLIKAFIFAGIIATVACHKGMHCGQGAEGVGKATTEAVVAA 237 Query: 354 ISIVIIIDSLFAIFYFAI 371 +++ + + + Sbjct: 238 SISILVSNFFVTLVLNNL 255 >gi|83952043|ref|ZP_00960775.1| ABC transporter, inner membrane subunit [Roseovarius nubinhibens ISM] gi|83837049|gb|EAP76346.1| ABC transporter, inner membrane subunit [Roseovarius nubinhibens ISM] Length = 261 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 64/264 (24%), Positives = 123/264 (46%), Gaps = 7/264 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 IG ++ F+ G +S+ + + F +LI+ +G Sbjct: 4 IAQFLASIGATVLGFLATIGRVTIFAGNTVSH---LIRPPFYGREFGAALIQ----IGWL 56 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PVV + + TG +A Q ++F AE +++I RE+G +L +M+A R S Sbjct: 57 SLPVVGMTALFTGGALALQIYAGGARFNAETVVPSIVAIGLTRELGPVLGGLMVAARVAS 116 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 +I AEIG+MK+ E+IDA+ T+ + ++ L PR+ A +++P+L + + I+G +V Sbjct: 117 SIAAEIGTMKVTEQIDALTTLSTNPMKYLTLPRVLAATLAVPVLVGVGDVLGIMGGFLVG 176 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 D A + TL ++ +GLIK + ++ G G + +G+ Sbjct: 177 VGRLDFGAATYLHNTLDFLTLWDVTSGLIKGAVFGFLVALMGCYFGMNSGRGAQGVGRAT 236 Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370 + VV + +++ + L +F+ Sbjct: 237 KSAVVAASVLILASNYLLTELFFS 260 >gi|121609355|ref|YP_997162.1| hypothetical protein Veis_2398 [Verminephrobacter eiseniae EF01-2] gi|121553995|gb|ABM58144.1| protein of unknown function DUF140 [Verminephrobacter eiseniae EF01-2] Length = 260 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 61/264 (23%), Positives = 130/264 (49%), Gaps = 8/264 (3%) Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167 + +G + + D A +L ++ G C + Q++++G Sbjct: 3 RQPIADLGFAVRSKLADIGMAARLLARLLLLAGAVCRRPALVR-------DQLHFLGNYS 55 Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 + ++++ G V+ QG + L ++GA L+++ +RE+G ++TA++ AGR+G++ Sbjct: 56 LAIIVVSGLFVGFVLGLQGYYTLQRYGASEALGLLVALSLVRELGPVVTALLFAGRAGTS 115 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + AEIG M+ E++ A+ M +D VR +++PR WA +I++PLL + + +IG ++V Sbjct: 116 LTAEIGLMRSGEQLSAMEMMAIDPVRRILAPRFWAGVIAMPLLAAMFSAVGVIGGAVVGV 175 Query: 288 KYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 I F+S+ + ++ G++K+ + VA+ +G+ + + Sbjct: 176 LMIGIDPGAFWSQMQGGVDIWRDLGNGVLKSLVFGFTVSFVALLQGYVARPTPEGVARAT 235 Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370 T VV + V+ +D + F+ Sbjct: 236 TRTVVLASLAVLALDFILTALMFS 259 >gi|254513828|ref|ZP_05125889.1| ABC transporter permease protein [gamma proteobacterium NOR5-3] gi|219676071|gb|EED32436.1| ABC transporter permease protein [gamma proteobacterium NOR5-3] Length = 369 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 94/366 (25%), Positives = 165/366 (45%), Gaps = 16/366 (4%) Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDT---IGAELIMYFMEKYHG 67 AG+W + + + + VD++++T D + Sbjct: 17 IAGDWSAAVLPTLDSLFTTLLE---TEGPLKVDVTSVTVWDPRLEAKLLHLQRLAYAGQR 73 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 +++L G QLF L + F + ++ IG +D Sbjct: 74 QLELLGTPDSQTQLFKLATAVAPYAGTAATSSGLFTLKNLRSTLADIG-------DDLLE 126 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 LG S + I + G + ++ L S + G ++A GA Sbjct: 127 SLEFLGATTSAVLRTLLGRSGMRR--REFIESLAQAGPQAMGIITLTSVLVGMILAYLGA 184 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL QFGA +F DL++I LRE+G L+TA+++AGR+G+A A++ +M+ NEEIDAI T+ Sbjct: 185 AQLQQFGAAVFVADLVAIGMLREMGALMTAIVMAGRTGAAYAAQLSTMQTNEEIDAITTL 244 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ + L+ PR+ AL++ +PLL + A+ I+G ++V P + S+ S T+ Sbjct: 245 GINPLEFLVVPRMLALLLMMPLLVVYADALGIVGGAVVAGGMGVTPLQ-YISQLDSAITI 303 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + G++K A I I + G G +S ++G+ T VV ++ +I+ D+ I Sbjct: 304 THFLVGVVKGLIFALLIAIAGCRAGMNAGRNSEAVGRATTEAVVTAVVYLIVADAAINIL 363 Query: 368 YFAIGI 373 +GI Sbjct: 364 CQLLGI 369 >gi|58697152|ref|ZP_00372577.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of Drosophila simulans] gi|58698663|ref|ZP_00373555.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of Drosophila ananassae] gi|58699132|ref|ZP_00373959.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of Drosophila ananassae] gi|225630652|ref|YP_002727443.1| hypothetical protein WRi_009360 [Wolbachia sp. wRi] gi|58534353|gb|EAL58525.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of Drosophila ananassae] gi|58534816|gb|EAL58923.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of Drosophila ananassae] gi|58536541|gb|EAL59904.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of Drosophila simulans] gi|225592633|gb|ACN95652.1| hypothetical protein WRi_009360 [Wolbachia sp. wRi] Length = 260 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 7/259 (2%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N IG+ + F+ S + + + ++ RQ+ +G + Sbjct: 7 NSVRIIGRYFINFLLRLGSAFIFFIQSLYHCLV-------PPYYFSNVARQIIEIGFFSL 59 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 P+V L GA I Q + E L++I ++E+G +L ++++ G+ GS++ Sbjct: 60 PIVGLTGVFIGAAIVLQSSLSDPLINQEQIIPKLVTITIIKELGPVLISLIMVGKVGSSV 119 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG+M+I E+IDA+ T+ ++ + LI+PRI A II P+LT+ A+ I G I Sbjct: 120 AAEIGTMRITEQIDALTTLNINPFKYLIAPRILASIIVFPILTVCADLIGIFGGCITAVF 179 Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 ++ ++ + TGLIKA I + + G+ + +G T+ Sbjct: 180 EFNHNLNIYIKHTAQFFNTYDFITGLIKATVFGAIISVSSCYYGYHCKEGARGVGVATTS 239 Query: 349 CVVQSISIVIIIDSLFAIF 367 VV S ++I+ + + + Sbjct: 240 TVVLSSILIILANYMITLI 258 >gi|300690218|ref|YP_003751213.1| hypothetical protein RPSI07_0537 [Ralstonia solanacearum PSI07] gi|299077278|emb|CBJ49904.1| conserved membrane protein of unknown function, DUF140 [Ralstonia solanacearum PSI07] Length = 255 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 61/262 (23%), Positives = 127/262 (48%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG + I+ A +L ++ + +I Q+ ++G Sbjct: 1 MISSIGFLVRVLISRLGYAARMLVALVGAWRDVLRRP-------RLVIEQLRFIGNDSFI 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK NEE+ A+ M +D + +++PR W I++PLL + + ++G V Sbjct: 114 AEIGLMKANEELIAMEMMAVDPLARVLAPRFWGGFIAMPLLAAIFSAVGVLGGYFVGVGL 173 Query: 290 YDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + + ++ G+IK+ A+ VA+ +G+ + + T Sbjct: 174 IGVDAGAFWSQMQAGVDVVDDVLNGVIKSVVFGVAVTFVALYQGYEAKATPEGVARATTR 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D + F+ Sbjct: 234 TVVIASLAVLALDFVLTALMFS 255 >gi|241758953|ref|ZP_04757065.1| ABC transport inner membrane subunit [Neisseria flavescens SK114] gi|241320774|gb|EER57007.1| ABC transport inner membrane subunit [Neisseria flavescens SK114] Length = 258 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 73/262 (27%), Positives = 132/262 (50%), Gaps = 8/262 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G K + FI S +++ +G A IRQ+Y+ GV V Sbjct: 2 NFIRSVGAKTLGFIQSLGSITLFFLQILAKSGTAFARP-------RLSIRQVYFAGVLSV 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 +V + G V+ QG QL++F + +++ LRE+G +L A++ A +G A+ Sbjct: 55 LIVAVSGLFVGMVLGLQGYTQLAKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAM 114 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 +EIG MK E+++A+ M +D V +++PR WA + S+PLL + N + I GA +V + Sbjct: 115 TSEIGLMKTTEQLEAMNVMAVDPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVE 174 Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + +F+S+ + T ++ GLIK+ A+ ++A+ +GF S + + T Sbjct: 175 WLGLDGGIFWSQMQNNITFHYDVLNGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRAST 234 Query: 348 TCVVQSISIVIIIDSLFAIFYF 369 VV S ++ +D + + F Sbjct: 235 RTVVSSALTILAVDFMLTAWMF 256 >gi|167564342|ref|ZP_02357258.1| toluene tolerance ABC transporter, permease protein [Burkholderia oklahomensis EO147] gi|167571490|ref|ZP_02364364.1| toluene tolerance ABC transporter, permease protein [Burkholderia oklahomensis C6786] Length = 255 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 56/262 (21%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + + V+ + +Q++++G Sbjct: 1 MISAIGRFVLGGLERTGYATRMFVRVVLEFFSLLRRP-------RLVTKQVHFLGNYSFV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G +++A++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVSALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D ++ +I+PR+WA +I++PLL + + ++G +V Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPLKNVIAPRMWAGVIAMPLLAAIFSAVGVLGGYVVGVLL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + ++ G++K+ A+ +A+ +G+ + T Sbjct: 174 IGVDPGAFWSQMQGGVEVWADVGNGVLKSVVFGFAVTFIALFQGYEAKPTPEGVSHATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVYASLAVLGLDFLLTALMFS 255 >gi|260753847|ref|YP_003226740.1| hypothetical protein Za10_1620 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283856508|ref|YP_163326.2| hypothetical protein ZMO1591 [Zymomonas mobilis subsp. mobilis ZM4] gi|258553210|gb|ACV76156.1| protein of unknown function DUF140 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283775512|gb|AAV90215.2| protein of unknown function DUF140 [Zymomonas mobilis subsp. mobilis ZM4] Length = 273 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 64/260 (24%), Positives = 120/260 (46%), Gaps = 7/260 (2%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170 IG+ + F+ A G+ I G + + + +G + +PV Sbjct: 21 LAAIGRLFIAFLAGIGRIARF-GMTILLRGAL------PPYYPGRFFHEFFEIGWNSLPV 73 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 V L + TG+ +AQQ S+F A+ + I +RE+G +L +M+ GR SAI A Sbjct: 74 VALTAVFTGSALAQQVYAAASRFSAQSTVPAAVVIGMVRELGPVLVGLMVVGRVTSAIAA 133 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 E+G+M++ E+IDA+ T+ D R L++PR++A ++LP L +LAN I G ++ Sbjct: 134 ELGAMRVTEQIDAMETLHTDPYRYLLAPRLYAATLALPFLVMLANVIGIFGGYLLSISKL 193 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 + ++ L+K+ + ++ GF + +G+ T V Sbjct: 194 GFNPENYLKVTREFLKAEDVHMALVKSAVFGFLVALLGCYNGFFATGGAAGVGRSTTRAV 253 Query: 351 VQSISIVIIIDSLFAIFYFA 370 V + +++ + + +F+F Sbjct: 254 VSAFIMILFSNLMITMFFFG 273 >gi|184159620|ref|YP_001847959.1| ABC transporter [Acinetobacter baumannii ACICU] gi|294842631|ref|ZP_06787314.1| ABC-type transport system [Acinetobacter sp. 6014059] gi|183211214|gb|ACC58612.1| ABC-type transport system [Acinetobacter baumannii ACICU] gi|322509530|gb|ADX04984.1| ttg2B [Acinetobacter baumannii 1656-2] gi|323519550|gb|ADX93931.1| ABC-type transport system [Acinetobacter baumannii TCDC-AB0715] Length = 258 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 130/263 (49%), Gaps = 9/263 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G+ +++ I A +L +I + G + QM+ VGV + Sbjct: 2 NTIAWLGRLVIERIRGIGVAALMLLQIIFSLPSA--------GGFGRFVYQMHRVGVMSL 53 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG L G+E ++S+ LRE+ ++ A++ AGR+GSA+ Sbjct: 54 LIITVSGLFIGLVLGLQGYSILVNVGSESMLGTMVSLTLLRELAPVVAALLFAGRAGSAL 113 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIGSMK +E++ ++ +G+D ++ ++SPR+WA I+SLP+LT++ I+G +V Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIVGGKLVGVD 173 Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + F+S + ++ G+IK+ A +A+ +G+A + +T Sbjct: 174 FLGVDEGSFWSGMQNNVQFGHDVVNGIIKSIVFALLCTWIAVFQGYACEPTPEGIATAMT 233 Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370 VV S V+ D + F Sbjct: 234 RTVVYSSLCVLGFDFVLTAVMFG 256 >gi|226939988|ref|YP_002795061.1| ABC transport system permease protein [Laribacter hongkongensis HLHK9] gi|226714914|gb|ACO74052.1| probable ABC transport system permease protein [Laribacter hongkongensis HLHK9] Length = 261 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 69/267 (25%), Positives = 131/267 (49%), Gaps = 8/267 (2%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 + IG +I++ + L ++ ++G IR++Y+ Sbjct: 2 LDGILKAVAGIGHRIIEGVWRLGFALRFLAAIVRHSGTALLR-------FQLTIREIYFA 54 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 GV + ++++ G V+ QG L +FG+ L+++ LRE+G +L A++ A R Sbjct: 55 GVLSLIIIVVSGTFVGMVLGLQGYTTLMRFGSADALGGLVALSLLRELGPVLAAILFASR 114 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 SGSA+ AEIG MK E++DA+ M ++ V +++PR WA ++S+PLL L + I G Sbjct: 115 SGSAMTAEIGLMKATEQLDAMAVMAVNPVARVVAPRFWAGVLSMPLLAALFSVMGIFGGY 174 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 V + ++S+ + +L ++ G+IK+ A+ ++A+ EG+ + + Sbjct: 175 FVGVVMIGLDHGAYWSQMQAAVSLHEDVINGIIKSGVFGVAVTLIAVFEGYDAQPTAAGV 234 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYF 369 T VV S +++ +D + F F Sbjct: 235 SAATTRTVVTSALVILALDFVLTAFMF 261 >gi|119897098|ref|YP_932311.1| hypothetical protein azo0807 [Azoarcus sp. BH72] gi|119669511|emb|CAL93424.1| conserved hypothetical membrane protein [Azoarcus sp. BH72] Length = 263 Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats. Identities = 59/266 (22%), Positives = 129/266 (48%), Gaps = 8/266 (3%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 + +G + + L +V+ +G+ + +R++Y+ G Sbjct: 2 SGLVAALRRLGGMSIDAVWRLGFATRFLLMVLVYSGQSVRRIH-------LTLREIYFAG 54 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V + ++++ G V+ QG L +FG+ L+++ RE+G ++ A++ A R+ Sbjct: 55 VLSLLIILVSGLFVGLVLGLQGYETLQRFGSSDALGVLVALSLTRELGPVVAALLFASRA 114 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 GSA+ AEIG MK E++ A+ M ++ + +++PR W +IS+PLL + + + G + Sbjct: 115 GSAVTAEIGLMKATEQLKAMDMMAVNPLARVVAPRFWGGVISMPLLAAMFSAMGVFGGWL 174 Query: 285 VIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 + + + F+S+ + + ++ G+IK+ A+ ++A+ EG+ + + Sbjct: 175 IGVVFIGVDDGAFWSQMQAAVDVRYDVLNGVIKSFVFGVAVSLIAVFEGYDCTPTAEGVS 234 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYF 369 + +T VV S ++ +D + F F Sbjct: 235 RAITRTVVSSALAILALDFVLTSFMF 260 >gi|300865432|ref|ZP_07110232.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] gi|300336571|emb|CBN55382.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] Length = 274 Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats. Identities = 65/239 (27%), Positives = 111/239 (46%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 I G+ + + + QM VG + + ++ + G V Q A + Sbjct: 24 FLAAILLGGQVTLHLFTRTIHRRNTLDQMVAVGPESLLIALVTAGFVGMVFTIQVAREFI 83 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 G ++++ RE+G +LTAV+IAGR GSA AEIG+M++ E+IDA+ + D Sbjct: 84 ALGVTNAVGGVLAVSLARELGPVLTAVIIAGRVGSAFAAEIGTMQVTEQIDALYILKTDP 143 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 + L+ PR+ A + LP+LTIL+ + + G ++ + Y +P VF + T +I Sbjct: 144 IDYLVIPRVIACCLMLPILTILSLVTGMAGGLLIATRMYGVPPVVFLESARNFLTPWDIC 203 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 IKA I ++ G + +G+ TT VV S+ + I + + F Sbjct: 204 APAIKAFVFGALIAVIGTSWGLTTTGGAKGVGQSTTTAVVTSMLAIFICNFFLSWLMFQ 262 >gi|326405357|ref|YP_004285439.1| putative ABC transporter permease [Acidiphilium multivorum AIU301] gi|325052219|dbj|BAJ82557.1| putative ABC transporter permease protein [Acidiphilium multivorum AIU301] Length = 260 Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats. Identities = 65/253 (25%), Positives = 123/253 (48%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + +LG + + + L + R + +G S +PVV L + Sbjct: 8 IAALGRLALGFVIMLGELALFAAAGLSGLVRPPFHLRNFGRALMEIGYSSLPVVALTAVF 67 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG V+A Q S+F + ++ + RE+G +L +M+AGR+GSAI AE+G+M++ Sbjct: 68 TGMVLALQSYIGFSRFDSSSVIASVVVLSLTRELGPVLAGLMVAGRAGSAIAAEMGTMRV 127 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 ++IDA+ T+ D +R L++PR+ A +I+LPLL ++A+ + G +V + Sbjct: 128 TDQIDALTTLATDPMRYLVTPRLLAGVIALPLLVVIADILGVAGGFLVSTVRLGFEPNAY 187 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + ++ +GL+KA I ++ G+ + +G T VV + ++ Sbjct: 188 LRDTVNYLHSNDVVSGLVKAAVFGFVIALMGCFHGYRSRGGAQGVGGATTAAVVSASVLI 247 Query: 358 IIIDSLFAIFYFA 370 + +D L +F+ Sbjct: 248 LALDYLMTQAFFS 260 >gi|148261852|ref|YP_001235979.1| hypothetical protein Acry_2870 [Acidiphilium cryptum JF-5] gi|146403533|gb|ABQ32060.1| protein of unknown function DUF140 [Acidiphilium cryptum JF-5] Length = 260 Score = 216 bits (550), Expect = 6e-54, Method: Composition-based stats. Identities = 65/253 (25%), Positives = 123/253 (48%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + +LG + + + L + R + +G S +PVV L + Sbjct: 8 IAALGRLALGFVIMLGELALFAAAGLSGLVRPPFHLRNFGRALMEIGYSSLPVVALTAVF 67 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG V+A Q S+F + ++ + RE+G +L +M+AGR+GSAI AE+G+M++ Sbjct: 68 TGMVLALQSYVGFSRFDSSSVIASVVVLSLTRELGPVLAGLMVAGRAGSAIAAEMGTMRV 127 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 ++IDA+ T+ D +R L++PR+ A +I+LPLL ++A+ + G +V + Sbjct: 128 TDQIDALTTLATDPMRYLVTPRLLAGVIALPLLVVIADILGVAGGFLVSTVRLGFEPNAY 187 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + ++ +GL+KA I ++ G+ + +G T VV + ++ Sbjct: 188 LRDTVNYLHSNDVVSGLVKAAVFGFVIALMGCFHGYRSRGGAQGVGGATTAAVVSASVLI 247 Query: 358 IIIDSLFAIFYFA 370 + +D L +F+ Sbjct: 248 LALDYLMTQAFFS 260 >gi|194290964|ref|YP_002006871.1| hypothetical protein RALTA_A2885 [Cupriavidus taiwanensis LMG 19424] gi|193224799|emb|CAQ70810.1| conserved hypothetical protein, DUF140; Putative abc-type transporter, membrane component [Cupriavidus taiwanensis LMG 19424] Length = 259 Score = 216 bits (550), Expect = 6e-54, Method: Composition-based stats. Identities = 59/265 (22%), Positives = 130/265 (49%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 IG + + I+ + V++ + + Q+++VG Sbjct: 1 MTGFFSAIGAAVRRSISGLGHATRMFLAVLALSPALLRR-------FRLVTDQVFFVGNL 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+ Sbjct: 54 SLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGT 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 ++ AEIG MK E++ A+ M ++ ++ +++PR WA +I++P+L + + I+G +V Sbjct: 114 SLTAEIGLMKAGEQLTAMEMMAVNPLQRVVAPRFWAGVIAMPVLAAIFSAVGILGGYVVG 173 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + + F+S+ + ++ G+IK+ A+ +A+ +GF + + Sbjct: 174 VQLIGVDAGAFWSQMQGGVDVRADVLNGVIKSFIFGIAVTFIALYQGFEARPTPEGVSRA 233 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + V+ +D L F+ Sbjct: 234 TTRTVVIASLAVLGLDFLLTALMFS 258 >gi|42520801|ref|NP_966716.1| hypothetical protein WD0989 [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410541|gb|AAS14650.1| membrane protein, putative [Wolbachia endosymbiont of Drosophila melanogaster] Length = 260 Score = 215 bits (549), Expect = 6e-54, Method: Composition-based stats. Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 7/259 (2%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N IG+ + F+ S + + + ++ RQ+ +G + Sbjct: 7 NSVRIIGRYFINFLLRLGSAFIFFIQSLYHCLV-------PPYYFSNIARQIIEIGFFSL 59 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 P+V L GA I Q + E L++I ++E+G +L ++++ G+ GS++ Sbjct: 60 PIVGLTGVFIGAAIVLQSSLSDPSINQEQIIPKLVTITIIKELGPVLISLIMVGKVGSSV 119 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG+M+I E+IDA+ T+ ++ + LI+PRI A II P+LT+ A+ I G I Sbjct: 120 AAEIGTMRITEQIDALTTLNINPFKYLIAPRILASIIVFPILTVCADLIGIFGGCITAVF 179 Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 ++ ++ + TGLIKA I + + G+ + +G T+ Sbjct: 180 EFNHNLNIYIKHTAQFFNTYDFITGLIKATAFGAIISVSSCYYGYHCKEGARGVGVATTS 239 Query: 349 CVVQSISIVIIIDSLFAIF 367 VV S ++I+ + + + Sbjct: 240 TVVLSSILIILANYMITLI 258 >gi|323140905|ref|ZP_08075818.1| hypothetical protein HMPREF9443_00583 [Phascolarctobacterium sp. YIT 12067] gi|322414643|gb|EFY05449.1| hypothetical protein HMPREF9443_00583 [Phascolarctobacterium sp. YIT 12067] Length = 283 Score = 215 bits (549), Expect = 7e-54, Method: Composition-based stats. Identities = 69/216 (31%), Positives = 115/216 (53%) Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 ++RQM +G +P+V++ TG V + Q A + + GA +++I RE+ Sbjct: 67 KEVVRQMALLGADSLPIVMMTILCTGMVFSVQTAKEFVRLGASSSVGGIVAIAMARELVP 126 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 +LT V++AGR G+AI AE+G+MK+ E+IDA+R M + V L+ PR AL++ +P+L + Sbjct: 127 VLTGVVVAGRIGAAIAAELGTMKVTEQIDALRVMAANPVSYLVVPRFIALVLMMPVLVVF 186 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 ANF IG +V Y I + + + A ++F G++K+ I IV +G Sbjct: 187 ANFIGNIGGWVVAHYYAGIGSFTYENSIRTLAEFYDVFGGMVKSCVFGAIIAIVGCYKGL 246 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G T VV SI +V I + +I + Sbjct: 247 NAPNGAEGVGLATTASVVLSIILVFITNYFLSIVLY 282 >gi|169632329|ref|YP_001706065.1| toluene tolerance efflux ABC transporter membrane protein [Acinetobacter baumannii SDF] gi|239503256|ref|ZP_04662566.1| toluene tolerance efflux ABC transporter membrane protein [Acinetobacter baumannii AB900] gi|260549862|ref|ZP_05824078.1| toluene tolerance efflux transporter [Acinetobacter sp. RUH2624] gi|169151121|emb|CAO99787.1| toluene tolerance efflux transporter (ABC superfamily, membrane) [Acinetobacter baumannii] gi|193078493|gb|ABO13499.2| toluene tolerance efflux transporter [Acinetobacter baumannii ATCC 17978] gi|260407112|gb|EEX00589.1| toluene tolerance efflux transporter [Acinetobacter sp. RUH2624] Length = 258 Score = 215 bits (549), Expect = 7e-54, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 130/263 (49%), Gaps = 9/263 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G+ +++ I A +L +I + G + QM+ VGV + Sbjct: 2 NTIAWLGRLVIERIRGIGVAALMLLQIIFSLPSA--------GGFGRFVYQMHRVGVMSL 53 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG L G+E ++S+ LRE+ ++ A++ AGR+GSA+ Sbjct: 54 LIITVSGLFIGLVLGLQGYSILVNVGSESMLGTMVSLTLLRELAPVVAALLFAGRAGSAL 113 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIGSMK +E++ ++ +G+D ++ ++SPR+WA I+SLP+LT++ I+G +V Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIVGGKLVGVD 173 Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + F+S + ++ G+IK+ A +A+ +G+A + +T Sbjct: 174 FLGVDEGSFWSGMQNNVQFGHDVVNGIIKSIVFALLCTWIAVFQGYACDPTPEGIATAMT 233 Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370 VV S V+ D + F Sbjct: 234 RTVVYSSLCVLGFDFVLTAVMFG 256 >gi|126727195|ref|ZP_01743032.1| ABC transporter, inner membrane subunit [Rhodobacterales bacterium HTCC2150] gi|126703623|gb|EBA02719.1| ABC transporter, inner membrane subunit [Rhodobacterales bacterium HTCC2150] Length = 258 Score = 215 bits (549), Expect = 7e-54, Method: Composition-based stats. Identities = 61/253 (24%), Positives = 115/253 (45%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + +G V + ++ + + +G +PVV L + Sbjct: 4 ALATLGQSTLGLLAAIGRVCLFAFSVVTHMLRPPFYIREFSQALLNIGFFSLPVVGLTAL 63 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 TG +A Q ++F AE ++SI +RE+G +L+ +M+AGR ++I AE+ SMK Sbjct: 64 FTGGALALQIYAGGARFNAEAVVPSIVSIGMVRELGPVLSGLMVAGRVSASIAAELASMK 123 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 + E+IDA+ T+ + ++ L PR+ A ++LP+L + + I G +V D A Sbjct: 124 VTEQIDALVTLSSNPLKYLAVPRVLAATLTLPILVAVGDSIGIFGGYLVGVNSLDFNAAG 183 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 + + L ++ +GLIK + I+ G G + +G+ VV S + Sbjct: 184 YLKNTVTFLELWDVTSGLIKGAVFGFILSIMGCYHGMNSGRGAQGVGRATINAVVSSSIL 243 Query: 357 VIIIDSLFAIFYF 369 ++ + L +F Sbjct: 244 ILAANYLLTSLFF 256 >gi|255067843|ref|ZP_05319698.1| toluene tolerance ABC efflux transporter, permease [Neisseria sicca ATCC 29256] gi|255047934|gb|EET43398.1| toluene tolerance ABC efflux transporter, permease [Neisseria sicca ATCC 29256] Length = 258 Score = 215 bits (549), Expect = 7e-54, Method: Composition-based stats. Identities = 73/262 (27%), Positives = 131/262 (50%), Gaps = 8/262 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G K + FI S L +++ +G +RQ+Y+ GV V Sbjct: 2 NFIRSVGAKTLGFIQSLGSITLFLLNILAKSGTAFVRP-------RLSVRQVYFAGVLSV 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 +V + G V+ QG QLS+F + +++ LRE+G +L A++ A +G A+ Sbjct: 55 LIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAM 114 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 +EIG MK E+++A+ M ++ V +++PR WA + S+PLL + N + I GA +V Sbjct: 115 TSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVT 174 Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + +F+S+ + T+ ++ GLIK+ A+ ++A+ +GF S + + T Sbjct: 175 WLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRAST 234 Query: 348 TCVVQSISIVIIIDSLFAIFYF 369 VV S ++ ID + F Sbjct: 235 RTVVSSALTILAIDFVLTALMF 256 >gi|261364829|ref|ZP_05977712.1| toluene tolerance ABC efflux transporter, permease [Neisseria mucosa ATCC 25996] gi|288566867|gb|EFC88427.1| toluene tolerance ABC efflux transporter, permease [Neisseria mucosa ATCC 25996] Length = 258 Score = 215 bits (549), Expect = 7e-54, Method: Composition-based stats. Identities = 73/262 (27%), Positives = 131/262 (50%), Gaps = 8/262 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G K + FI S L +++ +G +RQ+Y+ GV V Sbjct: 2 NFIRSVGAKTLGFIQSLGSITLFLLNILAKSGTAFVRP-------RLSVRQVYFAGVLSV 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 +V + G V+ QG QLS+F + +++ LRE+G +L A++ A +G A+ Sbjct: 55 LIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAM 114 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 +EIG MK E+++A+ M ++ V +++PR WA + S+PLL + N + I GA +V Sbjct: 115 TSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVT 174 Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + +F+S+ + T+ ++ GLIK+ A+ ++A+ +GF S + + T Sbjct: 175 WLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRAST 234 Query: 348 TCVVQSISIVIIIDSLFAIFYF 369 VV S ++ ID + F Sbjct: 235 RTVVSSALTILAIDFVLTALMF 256 >gi|148263316|ref|YP_001230022.1| hypothetical protein Gura_1245 [Geobacter uraniireducens Rf4] gi|146396816|gb|ABQ25449.1| protein of unknown function DUF140 [Geobacter uraniireducens Rf4] Length = 257 Score = 215 bits (549), Expect = 7e-54, Method: Composition-based stats. Identities = 66/246 (26%), Positives = 121/246 (49%), Gaps = 1/246 (0%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N S + + + S + Q+ +GV + +VIL TG V+ Sbjct: 8 NTLKSFLLEVQEFFTLSLRAVRSIVSPPYYYRDFTTQLDKIGVGSLFIVILTGLFTGMVM 67 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A Q QL F A + ++++ ++E+G +L+A+M+ GR GSAI AEIG+M + E+ID Sbjct: 68 ALQALIQLKPFAATSYVGGMVAVTMIKELGPVLSALMVTGRVGSAITAEIGTMVVTEQID 127 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R G D V+ L++ R+ A+++++PLLTI+ + +++G I+ YD+ +++ Sbjct: 128 AMRVEGTDIVKRLVTSRLKAILVAMPLLTIITDAISLLGGYIMSAS-YDMNPIMYWKSIP 186 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 ++ G+ K F I ++ GF + +G VV S I+++ D Sbjct: 187 QFMVFQDLIEGVAKPAFFGFVIAMIGCHVGFNTRGGAEGVGASAKRAVVISSVIILVSDF 246 Query: 363 LFAIFY 368 + Sbjct: 247 FLTKIF 252 >gi|225077106|ref|ZP_03720305.1| hypothetical protein NEIFLAOT_02159 [Neisseria flavescens NRL30031/H210] gi|224951663|gb|EEG32872.1| hypothetical protein NEIFLAOT_02159 [Neisseria flavescens NRL30031/H210] Length = 258 Score = 215 bits (549), Expect = 8e-54, Method: Composition-based stats. Identities = 72/262 (27%), Positives = 131/262 (50%), Gaps = 8/262 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G K + FI S +++ +G IRQ+Y+ GV V Sbjct: 2 NFIRSVGAKTLGFIQSLGSITLFFLHILAKSGTAFTRP-------RLSIRQVYFAGVLSV 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 +V + G V+ QG QL++F + +++ LRE+G +L A++ A +G A+ Sbjct: 55 LIVAVSGLFVGMVLGLQGYTQLAKFKSADVLGYMVAASLLRELGPVLAAILFASSAGGAM 114 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 +EIG MK E+++A+ M +D V +++PR WA + S+PLL + N + I GA +V + Sbjct: 115 TSEIGLMKTTEQLEAMNVMAVDPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVE 174 Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + +F+S+ + T ++ GLIK+ A+ ++A+ +GF S + + T Sbjct: 175 WLGLDGGIFWSQMQNNITFHYDVLNGLIKSAAFGVAVTLIAVHQGFHCVSTSEGILRAST 234 Query: 348 TCVVQSISIVIIIDSLFAIFYF 369 VV S ++ +D + + F Sbjct: 235 RTVVSSSLTILAVDFMLTAWMF 256 >gi|241762420|ref|ZP_04760498.1| protein of unknown function DUF140 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373014|gb|EER62672.1| protein of unknown function DUF140 [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 273 Score = 215 bits (548), Expect = 8e-54, Method: Composition-based stats. Identities = 64/260 (24%), Positives = 120/260 (46%), Gaps = 7/260 (2%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170 IG+ + F+ A G+ I G + + + +G + +PV Sbjct: 21 LAAIGRLFIAFLAGIGRIARF-GITILLRGAL------PPYYPGRFFHEFFEIGWNSLPV 73 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 V L + TG+ +AQQ S+F A+ + I +RE+G +L +M+ GR SAI A Sbjct: 74 VALTAVFTGSALAQQVYAAASRFSAQSTVPAAVVIGMVRELGPVLVGLMVVGRVTSAIAA 133 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 E+G+M++ E+IDA+ T+ D R L++PR++A ++LP L +LAN I G ++ Sbjct: 134 ELGAMRVTEQIDAMETLHTDPYRYLLAPRLYAATLALPFLVMLANVIGIFGGYLLSISKL 193 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 + ++ L+K+ + ++ GF + +G+ T V Sbjct: 194 GFNPENYLKVTREFLKAEDVHMALVKSTVFGFLVALLGCYNGFFATGGAAGVGRSTTRAV 253 Query: 351 VQSISIVIIIDSLFAIFYFA 370 V + +++ + + +F+F Sbjct: 254 VSAFIMILFSNLMITMFFFG 273 >gi|190571416|ref|YP_001975774.1| hypothetical protein WPa_1028 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190357688|emb|CAQ55136.1| Putative membrane protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 260 Score = 215 bits (548), Expect = 8e-54, Method: Composition-based stats. Identities = 59/251 (23%), Positives = 115/251 (45%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + +G + + + ++ RQ+ +G +P+V L Sbjct: 8 SVRIIGRCFMNFLLRIGNAFVFFIQSLYHCFIPPYYFSNVARQIIEIGFFSLPIVGLTGV 67 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 GAVI Q + E L++I ++E+G +L ++++ G+ GS+I AEIG+M+ Sbjct: 68 FIGAVIVLQSSLSGILINQEQVVPKLVTITIIKELGPVLISLIMVGKVGSSIAAEIGTMR 127 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 I E+IDA+ T+ ++ + LI PRI A +I P+LT+ A+ I G + ++ + Sbjct: 128 ITEQIDALTTLDINPFKYLIVPRILASVIVFPILTVCADLIGIFGGYVTAVFEFNHNLNI 187 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 + + + GL+KA I + + G+ + +G T+ VV S + Sbjct: 188 YIKYTAQFFNMYDFIVGLMKATAFGAIISVSSCYYGYHCREGARGVGIATTSTVVISSIL 247 Query: 357 VIIIDSLFAIF 367 +I+ + L + Sbjct: 248 IILANYLITLI 258 >gi|221638873|ref|YP_002525135.1| ABC transporter inner membrane subunit [Rhodobacter sphaeroides KD131] gi|221159654|gb|ACM00634.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides KD131] Length = 260 Score = 215 bits (548), Expect = 9e-54, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 119/264 (45%), Gaps = 7/264 (2%) Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 S +G+ + +G + G + ++ + L+ + +G Sbjct: 2 SAAAPIAALGRATL-------GMLAAVGRIALFAGAVVSHLFRPPFYPRELLTALIQIGW 54 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 +PVV L + TG +A Q ++F AE +++I RE+G +L +M+A R Sbjct: 55 LSLPVVGLTAIFTGGALALQIYAGGARFSAEAVVPSIVAIGMTRELGPVLGGLMVAARVA 114 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 S+I AEIG+MK+ E+IDA+ T+ + ++ L PR+ A +++P+L + + I G +V Sbjct: 115 SSIAAEIGTMKVTEQIDALVTLSTNPLKYLAVPRVLAATLAVPILVAVGDSIGIAGGWLV 174 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 D A + + ++ +GL+K + ++ G G + +G+ Sbjct: 175 GVNRLDFNSATYIKNTTDFLEVWDVGSGLVKGAAFGFIVALMGCYHGMNSGRGAQGVGRA 234 Query: 346 VTTCVVQSISIVIIIDSLFAIFYF 369 + VV + +++ + L +F Sbjct: 235 TKSAVVAASVLILAANYLLTEVFF 258 >gi|153004838|ref|YP_001379163.1| hypothetical protein Anae109_1976 [Anaeromyxobacter sp. Fw109-5] gi|152028411|gb|ABS26179.1| protein of unknown function DUF140 [Anaeromyxobacter sp. Fw109-5] Length = 250 Score = 215 bits (548), Expect = 1e-53, Method: Composition-based stats. Identities = 65/243 (26%), Positives = 116/243 (47%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + LG ++ GE + + L ++ QM ++GV +V + G V A Sbjct: 4 LKAGLEDLGRMLMFAGEMVGWAVRPPFRLELVLAQMAFIGVGSAFIVGVTGTFAGMVFAL 63 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q F + QF AE + ++ RE+ + TA+M+ GRSGSAI E+G+M++ E+IDA+ Sbjct: 64 QMNFAMKQFAAEGYVGGSVAFSLARELSPVFTALMVTGRSGSAIATELGTMRVTEQIDAM 123 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 +M ++ ++ L+ PR+ A +I P LT+L N G ++ IP + + Sbjct: 124 ESMAVNPIQYLVVPRVIASLIMFPFLTMLFNSLGYAGGFVMGVYVAGIPIGPYLAHTQEF 183 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + +I GL KA + ++ G+A + +G+ T VV S +++ D + Sbjct: 184 MDVGDILHGLFKAVVFGLIVSVITTWRGYAAFGGAKGVGEGTTRGVVASSITILLADYVI 243 Query: 365 AIF 367 Sbjct: 244 TFI 246 >gi|298491186|ref|YP_003721363.1| hypothetical protein Aazo_2257 ['Nostoc azollae' 0708] gi|298233104|gb|ADI64240.1| protein of unknown function DUF140 ['Nostoc azollae' 0708] Length = 265 Score = 215 bits (548), Expect = 1e-53, Method: Composition-based stats. Identities = 69/239 (28%), Positives = 118/239 (49%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 L I G+ K K + + Q+ VG + + +L + GAV Q A + Sbjct: 17 LLAAILLGGQVIVHLMKGKIHRRNTLEQLAAVGPDSLFIALLTAVFVGAVFTIQVAREFI 76 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 FGA ++++ RE+ +LTAV++AGR GSA AEIG+M++ E+IDA+ + D Sbjct: 77 NFGAGNLVGGVLAVALTRELTPVLTAVILAGRVGSAFAAEIGTMRVTEQIDALLILKTDP 136 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 + L+ PRI A ++ LP+LT+L+ + + G I+ Y++ VF + + +I Sbjct: 137 IDYLVIPRIIACLLMLPILTLLSLLAGMFGGLIIATHIYNLSDTVFLDSARNFLDIWDIC 196 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +IKA I I+ G + +G+ TT VV ++ I+ I + + F Sbjct: 197 SAMIKAGCFGVLIAIIGCSWGLTTTGGAKGVGQSTTTAVVTALLIIFISNFFLSWLMFQ 255 >gi|57238787|ref|YP_179923.1| hypothetical protein Erum0570 [Ehrlichia ruminantium str. Welgevonden] gi|58578712|ref|YP_196924.1| hypothetical protein ERWE_CDS_00480 [Ehrlichia ruminantium str. Welgevonden] gi|58616774|ref|YP_195973.1| hypothetical protein ERGA_CDS_00470 [Ehrlichia ruminantium str. Gardel] gi|57160866|emb|CAH57768.1| putative integral membrane protein [Ehrlichia ruminantium str. Welgevonden] gi|58416386|emb|CAI27499.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel] gi|58417338|emb|CAI26542.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Welgevonden] Length = 265 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 64/267 (23%), Positives = 119/267 (44%), Gaps = 7/267 (2%) Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY 161 YN L IGK + + + + + + + +Q Sbjct: 5 PLYNKLCWLFQSIGKYAIVLVFNIGDAFIFFIRFVYHCLC-------PPYYYCVIWKQFI 57 Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221 + +P+V + + TGAV+ Q A ++ + F ++ + +RE+G +L ++IA Sbjct: 58 EIFFFSLPIVGVTAIFTGAVLILQNALIINTNVSNDFIAGVVVVAIVRELGPVLIGLIIA 117 Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281 GR G++I AEIG+M+I E+IDA+ T+ + + L+ PR+ A +IS+P+L + A+ G Sbjct: 118 GRVGASIAAEIGTMRITEQIDALFTLNTNPFKYLVVPRVIAAMISMPILILCADLIGSYG 177 Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341 IV ++ ++ GLIKA I + G+ + Sbjct: 178 GYIVGSFQLGCTPEIYIRGVMKFLHTRDVVLGLIKATVFGFIISFMGCYNGYYCSGGARG 237 Query: 342 LGKKVTTCVVQSISIVIIIDSLFAIFY 368 +G T VV S ++I ++ + +FY Sbjct: 238 VGIATTYVVVISSMLIIFLNYIVTVFY 264 >gi|169794572|ref|YP_001712365.1| toluene tolerance efflux ABC transporter membrane protein [Acinetobacter baumannii AYE] gi|213158857|ref|YP_002320855.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB0057] gi|215482161|ref|YP_002324343.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB307-0294] gi|260557005|ref|ZP_05829222.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii ATCC 19606] gi|294839769|ref|ZP_06784452.1| toluene tolerance protein Ttg2B [Acinetobacter sp. 6013113] gi|294860447|ref|ZP_06798216.1| toluene tolerance protein Ttg2B [Acinetobacter sp. 6013150] gi|301347321|ref|ZP_07228062.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB056] gi|301510049|ref|ZP_07235286.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB058] gi|301597237|ref|ZP_07242245.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB059] gi|169147499|emb|CAM85360.1| toluene tolerance efflux transporter (ABC superfamily, membrane) [Acinetobacter baumannii AYE] gi|213058017|gb|ACJ42919.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB0057] gi|213988817|gb|ACJ59116.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB307-0294] gi|260409611|gb|EEX02912.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii ATCC 19606] Length = 259 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 80/264 (30%), Positives = 135/264 (51%), Gaps = 10/264 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G+ +++ I + AH+L +I S+ KG + QM+ VGV + Sbjct: 2 NTIAWLGRLVIERIRGIGAAAHMLLQIIF--------SFPTKGGFGRFVYQMHRVGVMSL 53 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + GAV+ Q L FGAE +S+ LRE+ ++ A++ AGR+GSA+ Sbjct: 54 LIIAVSGLFIGAVLGLQMYSILVTFGAESMLGTAISLTLLRELASVVAALLFAGRAGSAL 113 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIGSMK +E++ ++ +G+D ++ ++SPR+WA I+SLP+LT++ IIG +V Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIIGGKMVGVD 173 Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTG-LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + F+S +T +IF G +IK+ A VA+ +G+A + + Sbjct: 174 FLGADEGSFWSGMQNTVRFGHDIFNGTIIKSIVFALICTWVAVYQGYACDPTPEGIATAM 233 Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370 T VV S V+ D + F Sbjct: 234 TRTVVYSSLCVLGFDFVLTAVMFG 257 >gi|261378129|ref|ZP_05982702.1| toluene tolerance ABC efflux transporter, permease [Neisseria cinerea ATCC 14685] gi|269145589|gb|EEZ72007.1| toluene tolerance ABC efflux transporter, permease [Neisseria cinerea ATCC 14685] Length = 258 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 73/262 (27%), Positives = 132/262 (50%), Gaps = 8/262 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G K + FI S L +++ +G +RQ+Y+ GV V Sbjct: 2 NFIRSVGAKTLGFIQSLGSITLFLLNILAKSGTAFVRP-------CLSVRQVYFAGVLSV 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 +V + G V+ QG QLS+F + +++ LRE+G +L A++ A +G A+ Sbjct: 55 LIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAM 114 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 +EIG MK E+++A+ M ++ V +++PR WA + S+PLL + N + I GA +V Sbjct: 115 TSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVS 174 Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + +F+S+ + T+ ++ GLIK+ A+ ++A+ +GF S + + T Sbjct: 175 WLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRAST 234 Query: 348 TCVVQSISIVIIIDSLFAIFYF 369 VV S ++ ID + + F Sbjct: 235 RTVVSSALTILAIDFVLTAWMF 256 >gi|37521379|ref|NP_924756.1| hypothetical protein glr1810 [Gloeobacter violaceus PCC 7421] gi|35212376|dbj|BAC89751.1| glr1810 [Gloeobacter violaceus PCC 7421] Length = 255 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 62/231 (26%), Positives = 114/231 (49%) Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198 G+ + + + + Q+ VG V V ++ + G V Q A + FGA Sbjct: 14 AGQVLIHLLRGRIHWRNTVDQLSVVGTESVLVAVITAITIGMVFTIQVAREFISFGASSA 73 Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258 +++I RE+ +LTAV+IAGR GSA AE+G+M++ E+IDA+ + D + L++P Sbjct: 74 IGGVLAIALTRELAPVLTAVIIAGRVGSAFAAEVGTMRVTEQIDALEVLRTDPIDYLVTP 133 Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318 R+ A + LP+LTI+A+ + + G + + Y I ++ + ++ +GLIKA Sbjct: 134 RVIACAVMLPVLTIVADVTGLAGGLFITTQLYGISATLYLDSARNLLESWDMISGLIKAG 193 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 I ++ G + +G T VV ++ + I++ + + F Sbjct: 194 IFGVLIALIGTNWGLTTTGGARGVGNSTTQSVVTALLTIFIVNFILSALMF 244 >gi|238023142|ref|ZP_04603568.1| hypothetical protein GCWU000324_03068 [Kingella oralis ATCC 51147] gi|237865525|gb|EEP66665.1| hypothetical protein GCWU000324_03068 [Kingella oralis ATCC 51147] Length = 257 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 72/262 (27%), Positives = 130/262 (49%), Gaps = 8/262 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N G K + FI + A L ++ + + IRQMY+ GV V Sbjct: 2 NFIQSTGAKTLAFIQTLGANALFLLKILLLLPQTLLRA-------RLTIRQMYFSGVLSV 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G VI QG QL++F + +++ LRE+G +L A++ A +G A+ Sbjct: 55 LIIAVSGLFVGMVIGLQGYTQLAKFKSADVLGFMVAASLLRELGPVLAAILFASSAGGAM 114 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 +EIG MK E+++A+ M ++ V +++PR WA ++S+PLL + N + I G +V + Sbjct: 115 TSEIGLMKTTEQLEAMDVMAVNPVARVVAPRFWAGVVSMPLLACIFNVAGIYGGYLVGVQ 174 Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + VF+S + + ++F GL K+ A+ ++A+ +GF + + + T Sbjct: 175 WLGLDTGVFWSNMQNNIDWSYDVFNGLTKSLIFGSAVALIAVYQGFHCTPTAEGILRAST 234 Query: 348 TCVVQSISIVIIIDSLFAIFYF 369 VV S V+ +D + F F Sbjct: 235 RTVVSSALTVLALDFILTAFMF 256 >gi|238019665|ref|ZP_04600091.1| hypothetical protein VEIDISOL_01539 [Veillonella dispar ATCC 17748] gi|237863706|gb|EEP64996.1| hypothetical protein VEIDISOL_01539 [Veillonella dispar ATCC 17748] Length = 242 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 64/217 (29%), Positives = 114/217 (52%) Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 L + +QM ++GV +P++ L GAV+ Q L +GA+ LM++ RE+G Sbjct: 26 LWHVFQQMAHLGVDSLPIISLTLLFAGAVMTLQITDVLITYGAQSTVGGLMAVAMGRELG 85 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 +L V++AGR G+AI AEIG+MK+ E+IDA+R M +D + L+ PR+ A +I +P+L Sbjct: 86 PILVGVVLAGRVGAAITAEIGTMKVTEQIDALRVMAVDPIGYLVVPRVVACMIMVPILAF 145 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 I G V + + + +T+++ GL+K+ I +V +G Sbjct: 146 YGVVIGIAGGYFVATAIKGLAPSTYLDSIQMFSTISDFTLGLVKSSVFGAVIALVGSYKG 205 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + + ++G T+ VV SI +V +++ + + Sbjct: 206 METKMGAEAVGFSTTSSVVTSIILVFVLNYFLSTLLY 242 >gi|254423355|ref|ZP_05037073.1| conserved hypothetical protein [Synechococcus sp. PCC 7335] gi|196190844|gb|EDX85808.1| conserved hypothetical protein [Synechococcus sp. PCC 7335] Length = 264 Score = 214 bits (546), Expect = 2e-53, Method: Composition-based stats. Identities = 69/239 (28%), Positives = 116/239 (48%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 L I G+ + I QM VG + + ++ S G V Q + Sbjct: 17 LLSAILLGGQVIIHVISKPIHRRNTIEQMSAVGPESLLIALVTSVFVGMVFTIQVTREFI 76 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 FGA +++I RE+ +LTAV++AGR GSA AEIG+M++ E+IDA++ + D Sbjct: 77 TFGATTAIGGVLAITLSRELAPVLTAVVLAGRVGSAFAAEIGTMRVTEQIDALQMLRSDP 136 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A + +P+L +LA + ++G +V Y IPFAVF + + T+ ++ Sbjct: 137 VDYLVIPRVIACALMVPMLNVLAIITGLLGGLVVATTLYAIPFAVFLNSARNFLTIWDLA 196 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 LIK+ I ++ G + +G+ TT VV S+ + + + + F Sbjct: 197 ASLIKSLIFGVLIAVIGSSWGLTTTGGAKGVGQSTTTAVVTSLLAIFVSNFFLSWMMFQ 255 >gi|227825164|ref|ZP_03989996.1| membrane protein [Acidaminococcus sp. D21] gi|226905663|gb|EEH91581.1| membrane protein [Acidaminococcus sp. D21] Length = 260 Score = 214 bits (546), Expect = 2e-53, Method: Composition-based stats. Identities = 71/266 (26%), Positives = 124/266 (46%), Gaps = 9/266 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 K + ++G + V + ++ + + ++RQM +G Sbjct: 3 LKTICAYLGHRAVYAFRATGRIMNLFFATCAALSKATPR---------EVLRQMAKLGAD 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +P+V + S TG V++ Q A + +FGA +++I RE+ +L V++AGR G+ Sbjct: 54 SLPIVSMTSMCTGMVLSVQTAKEFVRFGAADSVGGIVAIAMARELAPILAGVVVAGRIGA 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 AI AEIG+MK+ E+IDA+R M + L++PR A+++ +P+L I AN IG V Sbjct: 114 AIAAEIGTMKVTEQIDALRVMATSPTQYLVAPRFLAIVLMMPILVIYANLVGDIGGGFVA 173 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 Y I +F ++ GLIK I ++ +G + +GK Sbjct: 174 MNYAGIGSHMFIESIRGFVESWDLVGGLIKGSVFGAIIAVIGCHKGLNAQQGAEGVGKAT 233 Query: 347 TTCVVQSISIVIIIDSLFAIFYFAIG 372 T VV SI ++ I + ++ + G Sbjct: 234 TASVVLSIILIFIFNYFLSVMLYVHG 259 >gi|262370600|ref|ZP_06063925.1| toluene tolerance protein Ttg2B [Acinetobacter johnsonii SH046] gi|262314400|gb|EEY95442.1| toluene tolerance protein Ttg2B [Acinetobacter johnsonii SH046] Length = 259 Score = 214 bits (546), Expect = 2e-53, Method: Composition-based stats. Identities = 67/264 (25%), Positives = 129/264 (48%), Gaps = 10/264 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G+++++ + + +L ++ + + + QMY VGV + Sbjct: 2 NAIALLGRRVIERVRGIGVASLMLLQILFSMPTALG--------VRLFVYQMYRVGVLSL 53 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++++ GAV+ Q L FG+E +++ LRE+ ++ A++ AGR+GSA+ Sbjct: 54 LIIVVSGLFIGAVLGLQMYSILVTFGSEAMLGTAVALTLLRELAPVVAALLFAGRAGSAL 113 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG MK E++ ++ +G+D ++ +ISPR+WA I SLP+L+++ I+G +V Sbjct: 114 TAEIGLMKATEQLSSMEMIGVDPLKRVISPRLWAGIFSLPMLSVIFAAVGIMGGKMVGVD 173 Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTG-LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + ++S S+ ++ G +IK+ A +A+ +G+A S + Sbjct: 174 FLGADEGSYWSGIQSSVEFYKDVLNGTIIKSFVFALICTWIAVYQGYACEPTSEGIATST 233 Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370 T VV S V+ D + F Sbjct: 234 TRTVVYSSLCVLGFDFVLTAVMFG 257 >gi|148284291|ref|YP_001248381.1| ABC transporter permease protein [Orientia tsutsugamushi str. Boryong] gi|146739730|emb|CAM79561.1| ABC transporter permease protein [Orientia tsutsugamushi str. Boryong] Length = 301 Score = 214 bits (546), Expect = 2e-53, Method: Composition-based stats. Identities = 61/257 (23%), Positives = 120/257 (46%), Gaps = 7/257 (2%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 IG++ +K + + L I + + I+ + +G +P+V Sbjct: 49 IGQRTIKIFYNIILFQNFLFASIKGI-------FTLPYYFNITIQAIINIGFYSLPIVAA 101 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 S +GAV+A Q + + A ++ RE+G ++ +++AGR G++IVAEIG Sbjct: 102 TSLCSGAVLALQTYEGVVRSSAIHAIPMIIVTSITRELGPVIVGLIVAGRIGASIVAEIG 161 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 +M++ E+IDA+ T+ D ++ L++PR+ A +SLP L + ++ + G +V + Sbjct: 162 TMRVTEQIDALFTLATDPIKYLVTPRLVATTLSLPFLVLTSDVIGVFGGYLVSVYRLNFN 221 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 + T ++ +GLIKA IGI + G+ + +G T VV S Sbjct: 222 SYEYIQSTIHHLTSTDVISGLIKAIVFGMIIGITSCFHGYYSDKGAKGVGIATTYGVVHS 281 Query: 354 ISIVIIIDSLFAIFYFA 370 ++++ + + + Sbjct: 282 SILILLSNYIMTELLLS 298 >gi|325105498|ref|YP_004275152.1| protein of unknown function DUF140 [Pedobacter saltans DSM 12145] gi|324974346|gb|ADY53330.1| protein of unknown function DUF140 [Pedobacter saltans DSM 12145] Length = 260 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 65/240 (27%), Positives = 115/240 (47%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 F + + L LV F + +++Q Y +G + ++ L F+TG Sbjct: 7 GFRKKLNNIFYELYLVHKFIVRFFKELFSAPVEWKEIMKQCYLLGFKSLSLITLTGFITG 66 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V +Q L++FGA + L++I +R + LLTA++ AG+ GS I AE+GSMK+ E Sbjct: 67 IVFTKQSRPSLAEFGATSWLPSLVAIAIIRSLAPLLTALITAGKVGSNIGAELGSMKVTE 126 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +IDA+ G + + L+ R A I++P+LT ++GA + + + + + F Sbjct: 127 QIDAMEVSGTNPFKFLVVTRTLATTITIPILTFYTGLVGLLGAFLNVTTFENTSYQAFMQ 186 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 + + +IF IKA IGIV +G+ + +G+ VV + +V + Sbjct: 187 SAFESISFLDIFASTIKAIVFGFTIGIVGCYQGYNSSKGTEGVGRAANASVVIGMFLVFL 246 >gi|242277489|ref|YP_002989618.1| hypothetical protein Desal_0007 [Desulfovibrio salexigens DSM 2638] gi|242120383|gb|ACS78079.1| protein of unknown function DUF140 [Desulfovibrio salexigens DSM 2638] Length = 249 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 82/237 (34%), Positives = 130/237 (54%), Gaps = 1/237 (0%) Query: 134 LVISNTGEFCASSYKFKGFLL-SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 +V G + K F LIR + VG +P+V +IS TG ++A Q A QL + Sbjct: 10 MVSRLLGCLRLTPGNKKSFYRKRLIRDLASVGADSIPIVSVISACTGIILALQSAQQLEK 69 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 GA + +L+ + +RE+G LLTA+++ GRSG+A AEI +M+I+EEIDA+ MG++ V Sbjct: 70 VGAISYVANLVGVTIIRELGPLLTAIIVTGRSGAAFTAEIATMQISEEIDALEVMGIEPV 129 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 R L+ P++ A++I +P LT+ A+F I I +F+ L ++ Sbjct: 130 RFLVVPKMIAMLIMVPCLTVWADFVGIFSGGAFSAIALGINEVTYFNNSVEFLKLHDVLA 189 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 GL+KA A AI ++ +GF + +G+K T VV SI ++I++D F F Sbjct: 190 GLVKAGGFAVAITLIGCWQGFLAREGAADVGRKTTNSVVISIFMIILLDLFFTALNF 246 >gi|261401680|ref|ZP_05987805.1| toluene tolerance ABC efflux transporter, permease [Neisseria lactamica ATCC 23970] gi|269208206|gb|EEZ74661.1| toluene tolerance ABC efflux transporter, permease [Neisseria lactamica ATCC 23970] Length = 258 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 131/262 (50%), Gaps = 8/262 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G K + I S L +++ +G +RQ+Y+ GV V Sbjct: 2 NFIRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRP-------RLSVRQVYFAGVLSV 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 +V + G V+ QG QLS+F + +++ LRE+G +L A++ A +G A+ Sbjct: 55 LIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAM 114 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 +EIG MK E+++A+ M ++ V +++PR WA + S+PLL + N + I GA +V Sbjct: 115 TSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVT 174 Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + +F+S+ + T+ ++ GLIK+ A+ ++A+ +GF S + + T Sbjct: 175 WLGLDSGIFWSQMQNNITIHYDVINGLIKSVAFGVAVTLIAVHQGFHCVPTSEGILRAST 234 Query: 348 TCVVQSISIVIIIDSLFAIFYF 369 VV S ++ +D + + F Sbjct: 235 RTVVSSALTILAVDFILTAWMF 256 >gi|329913017|ref|ZP_08275865.1| putative transport protein (ABC superfamily, membrane) [Oxalobacteraceae bacterium IMCC9480] gi|327545454|gb|EGF30661.1| putative transport protein (ABC superfamily, membrane) [Oxalobacteraceae bacterium IMCC9480] Length = 258 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 59/265 (22%), Positives = 128/265 (48%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + +G ++ F+ A ++ + + Q+++VG Sbjct: 1 MLDWIAALGSRVTGFLYQIGYAARAFLAILRASAGLWRRP-------RLITDQIHFVGNY 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+ Sbjct: 54 SLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGT 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 ++ AEIG MK E++ A+ M +D ++ +++PR WA +I++P+L + + I+G +V Sbjct: 114 SLTAEIGLMKAGEQLSAMEMMAVDPIQRVLAPRFWAGVIAMPVLAAIFSAVGIVGGYVVG 173 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + I F+S+ + +I G++K+ A+ +A+ +G+ + + Sbjct: 174 VQMIGIDEGAFWSQMQGGVDVWQDIANGVLKSFVFGIAVTFIALFQGYEAQPTPEGVARA 233 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV V+ +D L F Sbjct: 234 TTRTVVIGSLTVLWLDFLMTALMFN 258 >gi|254670842|emb|CBA07277.1| putative membrane protein [Neisseria meningitidis alpha153] gi|308390063|gb|ADO32383.1| putative ABC transport inner membrane subunit [Neisseria meningitidis alpha710] gi|309378880|emb|CBX22467.1| unnamed protein product [Neisseria lactamica Y92-1009] gi|319409726|emb|CBY90032.1| conserved hypothetical membrane protein [Neisseria meningitidis WUE 2594] gi|325127428|gb|EGC50359.1| putative membrane protein [Neisseria meningitidis N1568] gi|325137489|gb|EGC60074.1| putative membrane protein [Neisseria meningitidis ES14902] Length = 258 Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 131/262 (50%), Gaps = 8/262 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G K + I S L +++ +G +RQ+Y+ GV V Sbjct: 2 NFIRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRP-------RLSVRQVYFAGVLSV 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 +V + G V+ QG QLS+F + +++ LRE+G +L A++ A +G A+ Sbjct: 55 LIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAM 114 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 +EIG MK E+++A+ M ++ V +++PR WA + S+PLL + N + I GA +V Sbjct: 115 TSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVS 174 Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + +F+S+ + T+ ++ GLIK+ A+ ++A+ +GF S + + T Sbjct: 175 WLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRAST 234 Query: 348 TCVVQSISIVIIIDSLFAIFYF 369 VV S ++ +D + + F Sbjct: 235 RTVVSSALTILAVDFILTAWMF 256 >gi|325266930|ref|ZP_08133601.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Kingella denitrificans ATCC 33394] gi|324981671|gb|EGC17312.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Kingella denitrificans ATCC 33394] Length = 257 Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 130/262 (49%), Gaps = 8/262 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +IG K + FI LG + + + +RQMY+ GV V Sbjct: 2 NPIQNIGAKTIAFIQ-------ALGATVLFLLNILMLLPQSLFRMRLTVRQMYFSGVMSV 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G VI QG QL++F + +++ LRE+G +L A++ A +G A+ Sbjct: 55 LIIAVSGLFVGMVIGLQGYTQLAKFKSADVLGFMVAASLLRELGPVLAAILFASSAGGAM 114 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 +EIG MK E+++A+ M ++ V +++PR WA ++S+PLL + N + I G +V + Sbjct: 115 TSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVLSMPLLACIFNVAGIYGGYLVGVQ 174 Query: 289 YYDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + VF+S + + ++ GL+K+ A+ ++A+ +GF + + + T Sbjct: 175 WLGLDSGVFWSNMQNNIDVVYDVGNGLLKSLIFGTAVSLIAVYQGFHCTPTAEGILRAST 234 Query: 348 TCVVQSISIVIIIDSLFAIFYF 369 VV S V+ +D + F F Sbjct: 235 RTVVSSALTVLALDFILTAFMF 256 >gi|294669772|ref|ZP_06734838.1| hypothetical protein NEIELOOT_01672 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308338|gb|EFE49581.1| hypothetical protein NEIELOOT_01672 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 258 Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 74/262 (28%), Positives = 136/262 (51%), Gaps = 8/262 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 NL +G K + FI S L +++++G +RQ+Y+ GV V Sbjct: 2 NLIRTVGAKTLGFIQALGSVCLFLLQILAHSGTSLLR-------FRLSVRQVYFAGVLSV 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG QL++F + +++ LRE+G +L A++ A +G A+ Sbjct: 55 LIIAVSGLFVGMVLGLQGYTQLAKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAM 114 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 +EIG MK E+++A+ M ++ V +++PR WA + S+PLL + N + I GA +V + Sbjct: 115 TSEIGLMKATEQLEAMNVMAINPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVQ 174 Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + +F+S+ + + ++ GLIK+ F A+ ++A+ +GF S + + T Sbjct: 175 WLGLDGGIFWSQMQNNISFGYDVLNGLIKSAFFGVAVTLIAVHQGFHALPTSEGILRAST 234 Query: 348 TCVVQSISIVIIIDSLFAIFYF 369 VV S +V+ ID + F F Sbjct: 235 RTVVSSALVVLAIDFILTAFMF 256 >gi|303246386|ref|ZP_07332665.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans JJ] gi|302492096|gb|EFL51971.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans JJ] Length = 268 Score = 213 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 77/264 (29%), Positives = 134/264 (50%), Gaps = 12/264 (4%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170 +G+ + +++ L + S K +++Q+Y++GV + V Sbjct: 12 VTWLGRTALSILSELGGFFIFLCQGLWRILVPFPSVPK-------IVQQVYFIGVKSIFV 64 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 ++LI TG V+ QG + L +FG+E +++ +RE+G +LTA+M+ GR+GS+I A Sbjct: 65 IVLIGLFTGMVLGLQGYYTLVKFGSEGLLGAAVALSIIRELGPVLTAIMLTGRAGSSIAA 124 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 EIG M+I+E+IDA+ TMG++ +R LI+PR+ A +I PLLT + + I G + Sbjct: 125 EIGIMRISEQIDALTTMGINPMRFLIAPRLAASLICFPLLTAIFDVVGIGGGYLTGVVLL 184 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKK 345 I V+F R + LA++ G K+ A + + EG+ G + + Sbjct: 185 GINPGVYFDRIDAAVELADVTGGFEKSIVFALLVAAICCYEGYFTHTRREGFGAKGVSLA 244 Query: 346 VTTCVVQSISIVIIIDSLFAIFYF 369 T+ VV S V++ D + F Sbjct: 245 TTSAVVVSCVTVLVADYVLTSFLL 268 >gi|167645542|ref|YP_001683205.1| hypothetical protein Caul_1577 [Caulobacter sp. K31] gi|167347972|gb|ABZ70707.1| protein of unknown function DUF140 [Caulobacter sp. K31] Length = 268 Score = 213 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 67/253 (26%), Positives = 119/253 (47%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + ++G V S + F +RQ+ +G +PVV L + Sbjct: 13 RPLRTIGRSTLGALRMVGGVGVFALRGVVSVFTPPWFASQFLRQLVAIGFFSLPVVGLTA 72 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 TGA + +F AE ++++ RE+G +L A+M+AGR +AI AEIG+M Sbjct: 73 IFTGAALGLNIYTGGGRFNAEQVMPQIVALGITRELGPVLAALMLAGRVSAAIAAEIGAM 132 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 + E+IDA+RT+ D R L++PR+ A + LPLLT++A+ + G +V + D Sbjct: 133 RATEQIDAMRTLSTDPFRYLVAPRLLAATLVLPLLTLVADVIGVAGGWLVAVRILDFNST 192 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 V+ + ++ +GLIKA + ++ G+ + +G+ T VV S Sbjct: 193 VYIRNTANFIQGWDVGSGLIKAAVFGFIVALMGCYHGYNAKGGARGVGRATTHAVVSSAI 252 Query: 356 IVIIIDSLFAIFY 368 ++ D + Sbjct: 253 LIFASDYFLTTLF 265 >gi|15677795|ref|NP_274959.1| hypothetical protein NMB1965 [Neisseria meningitidis MC58] gi|218767464|ref|YP_002341976.1| putative ABC transport inner membrane subunit [Neisseria meningitidis Z2491] gi|254804222|ref|YP_003082443.1| putative ABC transport system permease protein [Neisseria meningitidis alpha14] gi|296313905|ref|ZP_06863846.1| toluene tolerance ABC efflux transporter, permease [Neisseria polysaccharea ATCC 43768] gi|313669181|ref|YP_004049465.1| ABC transport inner membrane subunit [Neisseria lactamica ST-640] gi|7227225|gb|AAF42294.1| conserved hypothetical protein [Neisseria meningitidis MC58] gi|121051472|emb|CAM07765.1| putative ABC transport inner membrane subunit [Neisseria meningitidis Z2491] gi|254667764|emb|CBA03695.1| putative ABC transport system permease protein [Neisseria meningitidis alpha14] gi|254672981|emb|CBA07458.1| putative ABC transport system permease protein [Neisseria meningitidis alpha275] gi|261393293|emb|CAX50921.1| conserved hypothetical membrane protein [Neisseria meningitidis 8013] gi|296839439|gb|EFH23377.1| toluene tolerance ABC efflux transporter, permease [Neisseria polysaccharea ATCC 43768] gi|313006643|emb|CBN88109.1| putative ABC transport inner membrane subunit [Neisseria lactamica 020-06] gi|316985593|gb|EFV64540.1| toluene tolerance protein Ttg2B [Neisseria meningitidis H44/76] gi|325129426|gb|EGC52257.1| putative membrane protein [Neisseria meningitidis OX99.30304] gi|325135556|gb|EGC58174.1| putative membrane protein [Neisseria meningitidis M0579] gi|325139615|gb|EGC62155.1| putative membrane protein [Neisseria meningitidis CU385] gi|325201013|gb|ADY96468.1| putative membrane protein [Neisseria meningitidis H44/76] gi|325201398|gb|ADY96852.1| putative membrane protein [Neisseria meningitidis M01-240149] gi|325204915|gb|ADZ00369.1| putative membrane protein [Neisseria meningitidis M01-240355] gi|325207379|gb|ADZ02831.1| putative membrane protein [Neisseria meningitidis NZ-05/33] Length = 258 Score = 213 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 131/262 (50%), Gaps = 8/262 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G K + I S L +++ +G +RQ+Y+ GV V Sbjct: 2 NFIRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRP-------RLSVRQVYFAGVLSV 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 +V + G V+ QG QLS+F + +++ LRE+G +L A++ A +G A+ Sbjct: 55 LIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAM 114 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 +EIG MK E+++A+ M ++ V +++PR WA + S+PLL + N + I GA +V Sbjct: 115 TSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVT 174 Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + +F+S+ + T+ ++ GLIK+ A+ ++A+ +GF S + + T Sbjct: 175 WLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRAST 234 Query: 348 TCVVQSISIVIIIDSLFAIFYF 369 VV S ++ +D + + F Sbjct: 235 RTVVSSALTILAVDFILTAWMF 256 >gi|213018814|ref|ZP_03334622.1| putative membrane protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212995765|gb|EEB56405.1| putative membrane protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 244 Score = 213 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 59/242 (24%), Positives = 114/242 (47%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + +G + + + ++ RQ+ +G +P+V L GAVI Q Sbjct: 1 MNFLLRIGNAFVFFIQSLYHCFIPPYYFSNVARQIIEIGFFSLPIVGLTGVFIGAVIVLQ 60 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 + E L++I ++E+G +L ++++ G+ GS+I AEIG+M+I E+IDA+ Sbjct: 61 SSLSGILINQEQVVPKLVTITIIKELGPVLISLIMVGKVGSSIAAEIGTMRITEQIDALT 120 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 T+ ++ + LI PRI A +I P+LT+ A+ I G + ++ ++ Sbjct: 121 TLDINPFKYLIVPRILASVIVFPILTVCADLIGIFGGYVTAVFEFNHNLNIYIKYTAQFF 180 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + + GL+KA I + + G+ + +G T+ VV S ++I+ + L Sbjct: 181 NMYDFIVGLMKATAFGAIISVSSCYYGYHCREGARGVGIATTSTVVISSILIILANYLIT 240 Query: 366 IF 367 + Sbjct: 241 LI 242 >gi|110639360|ref|YP_679569.1| ABC transporter permease [Cytophaga hutchinsonii ATCC 33406] gi|110282041|gb|ABG60227.1| ABC transporter, permease [Cytophaga hutchinsonii ATCC 33406] Length = 263 Score = 213 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 67/225 (29%), Positives = 113/225 (50%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 + F +K L +I Q Y VG+ +P++ L FVTG V +Q L FG Sbjct: 24 AFAFVALFFKQVFKPPFNLRQVIDQCYEVGIKSLPLITLTGFVTGLVFTKQSRPSLEVFG 83 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 A + L+SI +R +G L+TA++ AG+ GS+I AE+GSMK+ E+IDA+ ++ + Sbjct: 84 ATSWLPSLISIALVRALGPLVTALICAGKVGSSIGAELGSMKVTEQIDAMEVSAINPFKY 143 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L+ R+ A + +L+ + ++GA + + FA FF S +IF+ + Sbjct: 144 LVVTRVLATTFMVSILSFYCSLVGLLGAFVNVHANDTTSFANFFQSGFSDINFIDIFSSV 203 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 K+ IGIV +GF + +GK VV ++ ++ + Sbjct: 204 TKSLVFGFTIGIVGCYKGFNATQGTRGVGKAANQAVVTAMFLIFV 248 >gi|121635620|ref|YP_975865.1| putative ABC transport inner membrane subunit [Neisseria meningitidis FAM18] gi|120867326|emb|CAM11097.1| putative ABC transport inner membrane subunit [Neisseria meningitidis FAM18] gi|325131371|gb|EGC54080.1| putative membrane protein [Neisseria meningitidis M6190] gi|325133423|gb|EGC56087.1| putative membrane protein [Neisseria meningitidis M13399] gi|325141491|gb|EGC63964.1| putative membrane protein [Neisseria meningitidis 961-5945] gi|325143674|gb|EGC65993.1| putative membrane protein [Neisseria meningitidis M01-240013] gi|325199054|gb|ADY94510.1| putative membrane protein [Neisseria meningitidis G2136] gi|325206870|gb|ADZ02323.1| putative membrane protein [Neisseria meningitidis M04-240196] Length = 258 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 131/262 (50%), Gaps = 8/262 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G K + I S L +++ +G +RQ+Y+ GV V Sbjct: 2 NFIRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRP-------RLSVRQVYFAGVLSV 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 +V + G V+ QG QLS+F + +++ LRE+G +L A++ A +G A+ Sbjct: 55 LIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAM 114 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 +EIG MK E+++A+ M ++ V +++PR WA + S+PLL + N + I GA +V Sbjct: 115 TSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVS 174 Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + +F+S+ + T+ ++ GLIK+ A+ ++A+ +GF S + + T Sbjct: 175 WLSLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRAST 234 Query: 348 TCVVQSISIVIIIDSLFAIFYF 369 VV S ++ +D + + F Sbjct: 235 RTVVSSALTILAVDFILTAWMF 256 >gi|224069577|ref|XP_002303003.1| ABC transporter family protein [Populus trichocarpa] gi|222844729|gb|EEE82276.1| ABC transporter family protein [Populus trichocarpa] Length = 258 Score = 213 bits (543), Expect = 4e-53, Method: Composition-based stats. Identities = 58/236 (24%), Positives = 112/236 (47%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 V+ G+ S K + ++Q+ VG V V +L S G Q + ++ G Sbjct: 16 VLVLAGQVIIRSLMGKIHWRNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLG 75 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 ++++ RE+ ++T++++AGR GSA AE+G+M+++E+ID +R +G D V Sbjct: 76 LNRSIGGVLALAFSRELSPVVTSIVVAGRIGSAFAAELGTMQVSEQIDTLRVLGADPVDY 135 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L+ PR+ A ++LP LT++ + + ++ Y I + +I + + Sbjct: 136 LVIPRVIASCLALPFLTLMCFTVGMASSGLLADSVYGISLNIILDSAQRALNSWDIISAM 195 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 IK+ I IV+ G + +G+ T+ VV S+ + + D + +F Sbjct: 196 IKSGVFGAIISIVSCAWGVTTMGGAKGVGESTTSAVVISLVGIFMADFALSYCFFQ 251 >gi|161869245|ref|YP_001598412.1| putative ABC transport system permease protein [Neisseria meningitidis 053442] gi|304388521|ref|ZP_07370624.1| ABC superfamily ATP binding cassette transporter, membrane protein [Neisseria meningitidis ATCC 13091] gi|161594798|gb|ABX72458.1| putative ABC transport system permease protein [Neisseria meningitidis 053442] gi|304337518|gb|EFM03684.1| ABC superfamily ATP binding cassette transporter, membrane protein [Neisseria meningitidis ATCC 13091] Length = 258 Score = 213 bits (543), Expect = 4e-53, Method: Composition-based stats. Identities = 70/262 (26%), Positives = 131/262 (50%), Gaps = 8/262 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G + + I S L +++ +G +RQ+Y+ GV V Sbjct: 2 NFIRSVGARTLGLIQSLGSITLFLLNILAKSGTAFVRP-------RLSVRQVYFAGVLSV 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 +V + G V+ QG QLS+F + +++ LRE+G +L A++ A +G A+ Sbjct: 55 LIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAM 114 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 +EIG MK E+++A+ M ++ V +++PR WA + S+PLL + N + I GA +V Sbjct: 115 TSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVT 174 Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + +F+S+ + T+ ++ GLIK+ A+ ++A+ +GF S + + T Sbjct: 175 WLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRAST 234 Query: 348 TCVVQSISIVIIIDSLFAIFYF 369 VV S ++ +D + + F Sbjct: 235 RTVVSSALTILAVDFILTAWMF 256 >gi|262377332|ref|ZP_06070556.1| toluene tolerance protein Ttg2B [Acinetobacter lwoffii SH145] gi|262307785|gb|EEY88924.1| toluene tolerance protein Ttg2B [Acinetobacter lwoffii SH145] Length = 259 Score = 213 bits (543), Expect = 4e-53, Method: Composition-based stats. Identities = 69/264 (26%), Positives = 130/264 (49%), Gaps = 10/264 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G+++++ + +L ++ + + + I QMY VGV + Sbjct: 2 NAIAALGRRVIERVQGIGVATLMLLQILFSMPTWLG--------VKLFIYQMYRVGVLSL 53 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++++ GAV+ Q LS FG+E +++ LRE+ ++ A++ AGR+GSA+ Sbjct: 54 LIIVVSGLFIGAVLGLQMFSILSTFGSESMLGTAVALTLLRELAPVVAALLFAGRAGSAL 113 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG MK E++ ++ +G+D ++ +ISPR+WA I SLP+L+++ I+G +V Sbjct: 114 TAEIGLMKATEQLSSMEMIGVDPLKRVISPRLWAGIFSLPMLSVIFAAVGIMGGKMVGVD 173 Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTG-LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + ++S S+ ++ G +IK+ A +A+ +G+A S + Sbjct: 174 FLGADEGAYWSGMESSVQFYKDVLNGTIIKSFVFALICTWIAVYQGYACVPTSEGIATST 233 Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370 T VV S V+ D + F Sbjct: 234 TRTVVYSSLCVLGFDFVLTAVMFG 257 >gi|225619573|ref|YP_002720830.1| ABC transporter permease [Brachyspira hyodysenteriae WA1] gi|225214392|gb|ACN83126.1| Ttg2B, ABC-type transport system, permease component [Brachyspira hyodysenteriae WA1] Length = 268 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 64/248 (25%), Positives = 119/248 (47%), Gaps = 2/248 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 LG + E +++ L Q+ +GV V + TG V++ Q A Sbjct: 21 FLATLGEFATLMIEVFRYTFRPTFSFKLLKEQIIRMGVDSFVVAAVTVLCTGMVMSLQIA 80 Query: 188 FQLSQF--GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 L G F ++ ++E+ +L A++ AGR GS++ AEIG+M+++E++DA++ Sbjct: 81 VVLDSVLKGISQFVGSMVGKAMVKELSPMLLALIFAGRVGSSVTAEIGTMQVSEQLDALK 140 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 T+ + + + PR WA +ISLP+LT+ A+ ++G ++V +F R + Sbjct: 141 TLYTNPIEYVAVPRFWAAVISLPMLTVSADVIGVLGGAVVTVFVLRSDPMHYFDRAIAVI 200 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 ++ + LIK+ + +++ GF + +GK TT VV S I++I D + Sbjct: 201 SVGDFIGSLIKSTIFGAEVMLISCFYGFRTSGGAEGVGKATTTSVVYSFMIILITDYILV 260 Query: 366 IFYFAIGI 373 G+ Sbjct: 261 SILGMFGM 268 >gi|298369697|ref|ZP_06981014.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314] gi|298282254|gb|EFI23742.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314] Length = 258 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 69/262 (26%), Positives = 131/262 (50%), Gaps = 8/262 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G K + FI S L +++ + IRQ+Y+ GV V Sbjct: 2 NFIRTVGAKTLDFIQSLGSITLFLLRILTKSATAFTRP-------RLSIRQVYFSGVMSV 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG QL++F + +++ LRE+G +L A++ A +G A+ Sbjct: 55 LIIAVSGLFVGMVLGLQGYTQLAKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAM 114 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 +EIG MK E+++A+ M +D V +++PR WA + S+PLL + N + I GA +V + Sbjct: 115 TSEIGLMKTTEQLEAMNVMAVDPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVQ 174 Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + +F+++ + + ++ GLIK+ A+ ++A+ +GF S + + T Sbjct: 175 WLGLDGGIFWAQMQNNISFGYDVANGLIKSAAFGTAVTLIAVHQGFHCVPTSEGILRAST 234 Query: 348 TCVVQSISIVIIIDSLFAIFYF 369 VV S ++ +D + + F Sbjct: 235 RTVVSSALTILAVDFVLTAWMF 256 >gi|73666683|ref|YP_302699.1| hypothetical protein Ecaj_0050 [Ehrlichia canis str. Jake] gi|72393824|gb|AAZ68101.1| protein of unknown function DUF140 [Ehrlichia canis str. Jake] Length = 265 Score = 213 bits (542), Expect = 5e-53, Method: Composition-based stats. Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 7/259 (2%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 L +GK ++ I + + N + + + +Q + +P Sbjct: 13 LLETVGKYVINLIFNIGHSFVFFVKFVCNC-------FMPPYYYGVIFKQFIEIFFFSLP 65 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +V + + TGAV+ Q + + + F ++ + +RE+G +L ++IAGR G+AI Sbjct: 66 IVGITAIFTGAVLILQNSLIIHNNVSGDFVSGVVVVAIVRELGPVLIGLIIAGRVGAAIA 125 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG+M+I E+IDA+ T+ + + LI PRI + +I++PLL + A+ G IV Sbjct: 126 AEIGTMRITEQIDALFTLDTNPFKYLIVPRIISAMIAMPLLILCADLIGAYGGYIVGSYQ 185 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 ++ + ++ GLIKA I + G+ + +G T Sbjct: 186 LGYTPEIYVRGIMKFLHVKDVILGLIKATVFGFIISFMGCYSGYYCSGGARGVGMATTYV 245 Query: 350 VVQSISIVIIIDSLFAIFY 368 VV S +I+++ + +FY Sbjct: 246 VVVSSMFIILLNYVITVFY 264 >gi|308814916|dbj|BAJ22980.1| L-glutamate ABC transporter [Neisseria meningitidis] Length = 258 Score = 213 bits (542), Expect = 5e-53, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 131/262 (50%), Gaps = 8/262 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G K + I S L +++ +G +RQ+Y+ GV V Sbjct: 2 NFIRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRP-------RLSVRQVYFAGVLSV 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 +V + G V+ QG QLS+F + +++ LRE+G +L A++ A +G A+ Sbjct: 55 LIVAVSGMFVGIVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAM 114 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 +EIG MK E+++A+ M ++ V +++PR WA + S+PLL + N + I GA +V Sbjct: 115 TSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVS 174 Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + +F+S+ + T+ ++ GLIK+ A+ ++A+ +GF S + + T Sbjct: 175 WLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRAST 234 Query: 348 TCVVQSISIVIIIDSLFAIFYF 369 VV S ++ +D + + F Sbjct: 235 RTVVSSALTILAVDFILTAWMF 256 >gi|311746375|ref|ZP_07720160.1| putative ABC transporter, permease protein [Algoriphagus sp. PR1] gi|126575261|gb|EAZ79593.1| putative ABC transporter, permease protein [Algoriphagus sp. PR1] Length = 263 Score = 212 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 68/246 (27%), Positives = 122/246 (49%), Gaps = 7/246 (2%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 I KK KF + S + F + L + Q Y +GV +P++ L Sbjct: 10 ITKKTDKFFSGLASAWNF-------VRRFFKEVFIPPYELKEVFHQCYRIGVESLPLISL 62 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 F+ G V Q LS+FGA + L+SI +R +G L+TA++ AG+ GS+I AEIG Sbjct: 63 TGFIVGIVFTNQSRPSLSEFGATSWLPSLISIAVVRAMGPLVTALIAAGKMGSSIGAEIG 122 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 SMK+ E+IDA+ + + L+ R+ A +P+L + +F A++G+ + + + Sbjct: 123 SMKVTEQIDAMEVSATNPFKFLVVTRVLATTFMIPILVMYTDFVALMGSFLSVNANEMVS 182 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 FF + + + +I + ++K+ IGIV +G+ + +G+ + VV + Sbjct: 183 MTTFFVQVFESISFLDITSSVLKSLLFGFTIGIVGCYKGYNSSKGTEGVGRAANSAVVMA 242 Query: 354 ISIVII 359 + ++ I Sbjct: 243 MFLIFI 248 >gi|329120837|ref|ZP_08249497.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Neisseria bacilliformis ATCC BAA-1200] gi|327459709|gb|EGF06050.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Neisseria bacilliformis ATCC BAA-1200] Length = 258 Score = 212 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 70/262 (26%), Positives = 132/262 (50%), Gaps = 8/262 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 + +G K + FI S +++++G L +RQ+Y+ GV V Sbjct: 2 DFIQTVGAKTLAFIRSIGSVCLFFAQILAHSGTSLLR-------LRLSVRQVYFAGVLSV 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG QL++F + +++ LRE+G +L A++ A +G A+ Sbjct: 55 LIIAVSGLFVGMVLGLQGYTQLAKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAM 114 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 +EIG MK E+++A+ M ++ V +++PR WA + S+PLL + N + I GA +V + Sbjct: 115 TSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVE 174 Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + +F+S+ + ++ GLIK+ A+ ++A+ +GF S + + T Sbjct: 175 WLGLDGGIFWSQMQNNIAFGYDVLNGLIKSACFGVAVTLIAVHQGFHCVPTSEGILRAST 234 Query: 348 TCVVQSISIVIIIDSLFAIFYF 369 VV S V+ +D + F F Sbjct: 235 RTVVSSALTVLAVDFILTAFMF 256 >gi|83593780|ref|YP_427532.1| hypothetical protein Rru_A2445 [Rhodospirillum rubrum ATCC 11170] gi|83576694|gb|ABC23245.1| Protein of unknown function DUF140 [Rhodospirillum rubrum ATCC 11170] Length = 389 Score = 212 bits (541), Expect = 6e-53, Method: Composition-based stats. Identities = 82/373 (21%), Positives = 162/373 (43%), Gaps = 4/373 (1%) Query: 2 SENGITVFRFAGNWKSPEIS-EIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 E +V +G+W + + A ++ + S D+S + D+ Sbjct: 20 QEGADSVVVLSGDWLASQTGLRSAVEITRLLGDGAVKGSLRYDVSGLGRWDSALVAF-AR 78 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 M G+ + + L + N+ + + ++ +G + Sbjct: 79 MMRAAAGEGANKRFTLDESTLPEAALRLLKLAETNEPLPSASGDKAAASVVARVGHGTLG 138 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 F + + A ++G + + + ++ M G + + +V +++ + GA Sbjct: 139 FGAELGAIATLVGESVFGVARGLGGRAFTRS--VDILHLMREAGANALVIVAIVNGLIGA 196 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 ++A GA QL +FGA IF DL+ I +RE+ ++TA+++AGR+G A A + +M+ NEE Sbjct: 197 ILAFVGAVQLQRFGAGIFVADLVGIAMVREMAAVMTAIVMAGRTGGAYAAHLATMQGNEE 256 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA++ +G+ L+ PR+ AL+ +PLL + ++G +V D+ F + Sbjct: 257 IDALKVLGIPAYDFLVLPRVVALVTMMPLLYLYGCAIGLLGGFVVSLAILDMSATTFLDQ 316 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 GL+K+ + + G G + +G+ T+ VV I VI + Sbjct: 317 IQGAIAGRQFAIGLVKSVAFGFLVALAGCHIGLRAGRSAADVGRAATSAVVVGIVGVIAL 376 Query: 361 DSLFAIFYFAIGI 373 D++FA+ +GI Sbjct: 377 DAVFAVCADRLGI 389 >gi|167626717|ref|YP_001677217.1| ABC-type transport system permease [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|241667292|ref|ZP_04754870.1| ABC-type transport system permease protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254875843|ref|ZP_05248553.1| ABC transporter, permease protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|167596718|gb|ABZ86716.1| ABC-type transport system permease protein [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|254841864|gb|EET20278.1| ABC transporter, permease protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 254 Score = 212 bits (541), Expect = 6e-53, Method: Composition-based stats. Identities = 64/221 (28%), Positives = 120/221 (54%) Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209 K + I Q+ VGV+ + +++ G V++ QG + LS+FGA ++++ LR Sbjct: 32 KLSIRDCITQIKAVGVNSIIIIVTSGIFIGLVLSLQGYYTLSKFGAHSLLGVMVALSVLR 91 Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 E+G ++TA++ AGR+ S+I +EIG MK ++I++++ M ++ + ++S R WA +IS P+ Sbjct: 92 ELGPVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFILSTRFWACVISGPI 151 Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329 L ++ AI+ ++ I + F+S S+ T+++I G+IK+ A +A+ Sbjct: 152 LALIFATVAILAGFVLAEAGLGISYGEFWSNIQSSVTISDITNGIIKSLVFAFITAWIAL 211 Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +G+ SN + K T VV V+ D + F Sbjct: 212 YQGYYCIADSNGIAKATTKTVVYCCMSVLGADLILTSIMFG 252 >gi|189184336|ref|YP_001938121.1| toluene export ABC transporter permease protein [Orientia tsutsugamushi str. Ikeda] gi|189181107|dbj|BAG40887.1| toluene export ABC transporter permease protein [Orientia tsutsugamushi str. Ikeda] Length = 288 Score = 212 bits (541), Expect = 6e-53, Method: Composition-based stats. Identities = 60/257 (23%), Positives = 120/257 (46%), Gaps = 7/257 (2%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 IG++ +K + + L I + + I+ + +G +P+V Sbjct: 36 IGQRTIKIFYNIILFQNFLFASIKGI-------FTLPYYFNITIQAIINIGFYSLPIVAA 88 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 S +GAV+A Q + + A ++ RE+G ++ +++AGR G+++VAEIG Sbjct: 89 TSLCSGAVLALQTYEGVVRSSAIHAIPMIIVTSITRELGPVIVGLIVAGRIGASMVAEIG 148 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 +M++ E+IDA+ T+ D ++ L++PR+ A +SLP L + ++ + G +V + Sbjct: 149 TMRVTEQIDALFTLATDPIKYLVTPRLVATTLSLPFLVLTSDVIGVFGGYLVSVYRLNFN 208 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 + T ++ +GLIKA IGI + G+ + +G T VV S Sbjct: 209 SYEYIQSTIHHLTSNDVISGLIKAIVFGMIIGITSCFHGYYSDKGAKGVGIATTYGVVHS 268 Query: 354 ISIVIIIDSLFAIFYFA 370 ++++ + + + Sbjct: 269 SILILLSNYIMTELLLS 285 >gi|283852492|ref|ZP_06369760.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B] gi|283572100|gb|EFC20092.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B] Length = 256 Score = 212 bits (541), Expect = 6e-53, Method: Composition-based stats. Identities = 73/249 (29%), Positives = 134/249 (53%), Gaps = 1/249 (0%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLS-LIRQMYYVGVSGVPVVILISFVT 178 K ND+ + ++ +++ + + K + S + M ++G +P++ +IS Sbjct: 3 KAGNDTATLVWLVTGLLACARASLSPLTRVKTYQRSRIWSHMAWIGADSLPIISIISACV 62 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G ++A Q A QL + GA + +L+ + E+G LLT +++AGR+G+A AEI +M+I+ Sbjct: 63 GIILALQAATQLEKVGALSYVANLVGFSIITELGPLLTCLILAGRAGAAFTAEIATMQIS 122 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ MGLD VR L+ P+ A+ + PLLT+ + I + + + +F Sbjct: 123 EEIDALEVMGLDPVRFLVWPKFLAMCVMAPLLTLWGDAVGITAGGVFSALFLGLAGKAYF 182 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + T+ ++ GL+K+ AI IV+ +GF + +G++ T VV+SI ++I Sbjct: 183 LQTAHFLTMRDLLAGLVKSAGFGVAITIVSCWQGFLAKEGAADVGRRTTKAVVESIFLMI 242 Query: 359 IIDSLFAIF 367 ++D F Sbjct: 243 LLDLFFTAL 251 >gi|303256524|ref|ZP_07342538.1| toluene tolerance ABC transporter, permease protein [Burkholderiales bacterium 1_1_47] gi|331000622|ref|ZP_08324280.1| toluene tolerance protein Ttg2B [Parasutterella excrementihominis YIT 11859] gi|302860015|gb|EFL83092.1| toluene tolerance ABC transporter, permease protein [Burkholderiales bacterium 1_1_47] gi|329571184|gb|EGG52889.1| toluene tolerance protein Ttg2B [Parasutterella excrementihominis YIT 11859] Length = 263 Score = 212 bits (541), Expect = 6e-53, Method: Composition-based stats. Identities = 71/267 (26%), Positives = 133/267 (49%), Gaps = 8/267 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N +G + + + + L ++ N G ++Q+Y+VG Sbjct: 4 IFNWISSVGAWALSGVRTLGNFSRFLFRLVVNLGPSFTR-------FQDTLKQLYFVGNY 56 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++++ G V+ QG + LS +G+E L+++ LRE+G ++TA++ AGR+G+ Sbjct: 57 SLVIILVSGLFVGFVLGLQGDYVLSSYGSEQALGVLVALSLLRELGPVVTALLFAGRAGT 116 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 ++ AEIG M E++ A+ MG+D +R ++ PR A +IS+PLL I+ + IIG+ +V Sbjct: 117 SLTAEIGLMNAGEQLSALEMMGVDPIRRILGPRFLACVISMPLLAIMFSAVGIIGSWVVA 176 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + F+++ + + +I G+IK A+G +A+ EG+ + Sbjct: 177 VPLIGLDSGAFWAQMQAGVEVGPDIGNGIIKTFVFGVAVGAIALYEGYTARATPEGVSSA 236 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAIG 372 T VV S +V+ +D + F F G Sbjct: 237 TTRTVVVSSLVVLGLDFILTAFMFTHG 263 >gi|225850834|ref|YP_002731068.1| ABC-type transport system involved in resistance to organic solvents, permease component [Persephonella marina EX-H1] gi|225645536|gb|ACO03722.1| ABC-type transport system involved in resistance to organic solvents, permease component [Persephonella marina EX-H1] Length = 248 Score = 212 bits (540), Expect = 8e-53, Method: Composition-based stats. Identities = 74/252 (29%), Positives = 125/252 (49%), Gaps = 7/252 (2%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +KI F+ + + + + S K K +++ M +GV+ P++ + Sbjct: 2 EKIKNFVEHTGAAFLLF---LETLKVIILSPPKVKH----ILKYMEEIGVTAAPLIAITG 54 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 F TG V+ + +F AE L+S+ RE+ +L A+++ RSGSA+ A IG+M Sbjct: 55 FFTGGVLVVETYPTFHKFNAEFLIGALVSLSLSRELSPVLVALLVTARSGSAMAANIGTM 114 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 KI E+IDA++ M ++ VR LI+PR+ A ++ +P L IL+ ++G V Y I Sbjct: 115 KITEQIDALKVMAVNPVRYLIAPRLIASLLMVPALVILSYTFGLLGGYFVGVNLYGINPY 174 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 +F + L +I GL K+ A I IV+ G+ + +G+ TT VV S Sbjct: 175 LFVEKMKDFTELYDILGGLYKSMGFATIITIVSCYFGYVTKGGAEGVGRSTTTAVVVSSV 234 Query: 356 IVIIIDSLFAIF 367 +V+I+D Sbjct: 235 LVLIVDYFLTAI 246 >gi|307150966|ref|YP_003886350.1| hypothetical protein Cyan7822_1067 [Cyanothece sp. PCC 7822] gi|306981194|gb|ADN13075.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7822] Length = 266 Score = 212 bits (540), Expect = 8e-53, Method: Composition-based stats. Identities = 65/239 (27%), Positives = 114/239 (47%), Gaps = 1/239 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 L I TG + K + + QM VG + + + ++ + V G + Q A + Sbjct: 18 LWAAILLTGRVVFYLFTRKIDARNTLEQMMAVGPASLAIALITATVIGMIFTIQVAREFL 77 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 GA ++++ RE+ ++ AV++AGR GSA AEIG+M++ E+IDA+ + D Sbjct: 78 ALGAGSAVGGILALALSRELCPIMMAVVVAGRVGSAFAAEIGTMRVTEQIDALYMLNADP 137 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A I +P LT+LA + + G ++I ++Y I VF + + ++ Sbjct: 138 VEYLVIPRVVACCIMVPALTVLALITGLAGGLLMI-RFYGIADTVFLESIQNFVRVWDVI 196 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G IK C I I+ G + +G+ T VV + + I + + + F Sbjct: 197 CGPIKGIVFGCLIAIIGCNWGLTTTGGAKGVGESTTAAVVTCLLAIFIANFILSWIMFK 255 >gi|307731184|ref|YP_003908408.1| hypothetical protein BC1003_3170 [Burkholderia sp. CCGE1003] gi|307585719|gb|ADN59117.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1003] Length = 259 Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats. Identities = 59/265 (22%), Positives = 133/265 (50%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 +L +G+ +++ + + ++ + +Q+++VG Sbjct: 2 IGSLISTVGRSVLEGLGTAGYATRFFFRLLFEFFALLRRP-------RLVTKQIHFVGNY 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+ Sbjct: 55 SLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGT 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 ++ AEIG MK E++ A+ M +D V+++++PR+WA IIS+P+L + + ++G +V Sbjct: 115 SLTAEIGLMKAGEQLTAMEMMAVDPVKVVVAPRLWAGIISMPILAAIFSAVGVLGGYVVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + F+S+ + ++ G++K+ A+ VA+ +G+ + + Sbjct: 175 VLLIGVDAGAFWSQMQGGVDVWRDVGAGVVKSVVFGLAVTFVALFQGYEARPTPEGVSRA 234 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + V+ +D L F+ Sbjct: 235 TTKTVVYASLAVLGLDFLLTALMFS 259 >gi|323527530|ref|YP_004229683.1| hypothetical protein BC1001_3209 [Burkholderia sp. CCGE1001] gi|323384532|gb|ADX56623.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1001] Length = 259 Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats. Identities = 59/265 (22%), Positives = 131/265 (49%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 +L +G+ ++ + + ++ + +Q+++VG Sbjct: 2 IGSLISTLGRSVLDGLGTAGYATRFFFRLLFQFFPLLRRP-------RLVTKQIHFVGNY 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+ Sbjct: 55 SLVIIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGT 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 ++ AEIG MK E++ A+ M +D V+++++PR+WA IIS+P+L + + + G +V Sbjct: 115 SLTAEIGLMKAGEQLTAMEMMAVDPVKVVVAPRLWAGIISMPILAAIFSAVGVAGGYVVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + F+S+ + ++ G++K+ A+ VA+ +G+ + + Sbjct: 175 VLLIGVDAGAFWSQMQGGVDVWRDVGAGVVKSVVFGLAVTFVALFQGYEARPTPEGVSRA 234 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + V+ +D L F+ Sbjct: 235 TTKTVVYASLAVLGLDFLLTALMFS 259 >gi|149277771|ref|ZP_01883911.1| ABC transporter, permease [Pedobacter sp. BAL39] gi|149231459|gb|EDM36838.1| ABC transporter, permease [Pedobacter sp. BAL39] Length = 269 Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats. Identities = 67/244 (27%), Positives = 120/244 (49%), Gaps = 1/244 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 L V F + L+RQ Y +G + ++ L F+TG V +Q Sbjct: 24 MFLTLYDVCQFVTRFFKEGFLPPYEGKELMRQCYDIGYRSLALISLTGFITGVVFTKQSR 83 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L++FGA + L+ I LR + LLTA++ AG+ GS+I AE+GSM++ E+IDA+ Sbjct: 84 PSLAEFGATSWLPSLVGIALLRTLAPLLTALIAAGKVGSSIGAELGSMRVTEQIDAMEVS 143 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 + + L+S R+ A I++P+LT ++GA + + + D FF + T Sbjct: 144 ATNPFKFLVSTRVMASTITIPILTFYTAMVGMLGALLNVSLFEDTSARAFFQMSLESITF 203 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 +I +KA IG+V +G+ + +GK + VV + ++ I + + ++ Sbjct: 204 LDITASTVKAILFGFTIGMVGCYQGYNSSKGTEGVGKAANSAVVIGMFLIFI-EEVISVQ 262 Query: 368 YFAI 371 +F++ Sbjct: 263 FFSL 266 >gi|312888834|ref|ZP_07748397.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM 18603] gi|311298709|gb|EFQ75815.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM 18603] Length = 267 Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats. Identities = 67/257 (26%), Positives = 118/257 (45%) Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171 I K F L V F + +++Q Y VGV + ++ Sbjct: 7 TAIAKTGFSFKRWLTGIFIDLYNVYKFVLRFFKEVFFPPYEFKEILKQCYDVGVKSLLLI 66 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 + F+ G + +Q LS+FGA + L+SI LR + L+TA++ AG+ GS+I AE Sbjct: 67 SVTGFIVGVIFTKQSRPSLSEFGATSWLPSLVSIAILRALASLVTALIAAGKVGSSIGAE 126 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 +GSM++ E+IDA+ G + L+ R+ A I++PLL F A++G + + + Sbjct: 127 LGSMRVTEQIDAMEVSGTKPFKYLVCTRVLATTITIPLLASYTAFIALLGGYLNVSQNEG 186 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 + F + T + ++ L K+ IGIV +G+ + +GK VV Sbjct: 187 TSYTTFMEQVFEPLTFIDFWSTLAKSIMFGFTIGIVGCYQGYNSSRGTEGVGKAANAAVV 246 Query: 352 QSISIVIIIDSLFAIFY 368 ++ +V I + + + Sbjct: 247 TAMFLVFIEEVIIVQIF 263 >gi|193215278|ref|YP_001996477.1| hypothetical protein Ctha_1571 [Chloroherpeton thalassium ATCC 35110] gi|193088755|gb|ACF14030.1| protein of unknown function DUF140 [Chloroherpeton thalassium ATCC 35110] Length = 265 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 122/245 (49%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + S ++ + + K + ++ Q Y G +P+V++ S G+++ Sbjct: 14 DRIKSFFLVMQEFFLFSLRTFTTIGAIKKYWRDILNQAYISGTESIPIVLVSSISIGSLL 73 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + QL +FGA++ + ++ +RE+G +LT +M++ R G+ +E+G+MKI+E+ID Sbjct: 74 TMEVGNQLEEFGAKLMTGRTTALSVIRELGPMLTGLMLSARVGARNGSELGAMKISEQID 133 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R G D + L+ PR+ A ++ LT L++F+ + +++ Y+ I +++ Sbjct: 134 ALRAFGTDPIAKLVMPRLIASLLMFLPLTALSDFAGLTSGALIAEHYHHIDPGFYWNSVL 193 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + + + G +K P A I +V+ GF + +G+ +V S +V+I + Sbjct: 194 NLLIVKDFVVGFLKPPVFAVIITLVSCFNGFDATGGTAGVGRSTIKGIVVSSGLVLIANF 253 Query: 363 LFAIF 367 + Sbjct: 254 YVSKL 258 >gi|256424262|ref|YP_003124915.1| hypothetical protein Cpin_5283 [Chitinophaga pinensis DSM 2588] gi|256039170|gb|ACU62714.1| protein of unknown function DUF140 [Chitinophaga pinensis DSM 2588] Length = 264 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 67/246 (27%), Positives = 119/246 (48%), Gaps = 7/246 (2%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 I K I F D + +G + ++K + +IRQ Y VG + ++ + Sbjct: 13 ISKGIDGFFKDIFNIVLFIGRI-------FKEAFKRPVEIREVIRQCYQVGYKSLALITM 65 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 F+TG V +Q LS+FGA + L++I +R + L+TA++ AG+ GS+I AE+ Sbjct: 66 TGFITGLVFTKQSRPSLSEFGATSWLPSLIAIAVIRALAPLVTALICAGKVGSSIGAELA 125 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 SM++ E+IDA+ ++ + L++ R+ A IS+P+L ++G+ + I Sbjct: 126 SMRVTEQIDAMEVSAINPFKFLVTTRVMATTISIPILVGYTGLVGLLGSFLDIHLNEQTS 185 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 F FF + T +KA IG+V+ +G+ + +GK VV S Sbjct: 186 FTSFFQEAFKNIYFLDFITTGVKAVVFGFTIGVVSCYQGYHATQGTQGVGKAANISVVIS 245 Query: 354 ISIVII 359 + ++ I Sbjct: 246 MFLIFI 251 >gi|91203173|emb|CAJ72812.1| similar to ABC-type transport system permease protein [Candidatus Kuenenia stuttgartiensis] Length = 258 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 69/254 (27%), Positives = 128/254 (50%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 ++ + +G V + + L++++ G +V +I+ Sbjct: 4 LISIDHTVKKFLLSMGQVTLLAFKGFWGIFLPPFNPKLLLKEIDNFGAGSFLLVNIIALF 63 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG V++ Q + L +GAE++ ++S+ +RE+G +LT++M+ R GS I AEIGSM++ Sbjct: 64 TGMVMSLQTIYGLRMYGAEMYVGSVVSLSIVRELGPVLTSIMVGARIGSGIAAEIGSMQV 123 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+R +G ++ L+SP+I+A +I+LPLLT+ A+F I G I+ DI + Sbjct: 124 TEQIDAMRALGASPIKKLVSPKIFAGLITLPLLTVTADFIGIFGGLIIATFELDIDHIFY 183 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + +T T+++ +G+ K F I ++ G + +G+ T VV + Sbjct: 184 INSILTTITISDFISGIGKTVFFGLLIAVIGCYFGLKTSGGTTGVGRSTTISVVTISISI 243 Query: 358 IIIDSLFAIFYFAI 371 +I D + I Sbjct: 244 LIADFFLTKLFLMI 257 >gi|187925542|ref|YP_001897184.1| hypothetical protein Bphyt_3570 [Burkholderia phytofirmans PsJN] gi|187716736|gb|ACD17960.1| protein of unknown function DUF140 [Burkholderia phytofirmans PsJN] Length = 255 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 60/262 (22%), Positives = 130/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + ++ + +Q+++VG + Sbjct: 1 MISAIGRSVIGGLGTAGYATRFFFRLLLEFFPLLRRP-------RLVTKQIHFVGNYSLV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D V+++++PR+WA IIS+P+L + + + G +V Sbjct: 114 AEIGLMKAGEQLTAMEMMAVDPVKVVVAPRLWAGIISMPILAAIFSAVGVFGGYVVGVLL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + ++ G+IK+ A+ VA+ +G+ + + T Sbjct: 174 IGVDAGAFWSQMQGGVDVWRDVGAGVIKSVVFGLAVTFVALFQGYEAKPTPEGVSRATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVYASLAVLGLDFLLTALMFS 255 >gi|296159550|ref|ZP_06842374.1| protein of unknown function DUF140 [Burkholderia sp. Ch1-1] gi|295890258|gb|EFG70052.1| protein of unknown function DUF140 [Burkholderia sp. Ch1-1] Length = 255 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 60/262 (22%), Positives = 130/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + ++ + +Q+++VG + Sbjct: 1 MISAIGRSVLDGLGTAGYATRFFFRLLLEFFALLRRP-------RLVTKQIHFVGNYSLV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLTRYGSEEALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D V+++I+PR+WA IIS+P+L + + + G +V Sbjct: 114 AEIGLMKAGEQLTAMEMMAVDPVKVVIAPRLWAGIISMPILAAIFSAVGVFGGYVVGVLL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + ++ G++K+ A+ VA+ +G+ + + T Sbjct: 174 IGVDAGAFWSQMQGGVDVWHDVGAGVVKSVVFGLAVTFVALFQGYEAKPTPEGVSRATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVYASLAVLGLDFLLTALMFS 255 >gi|58584874|ref|YP_198447.1| ABC-type transport system involved in resistance to organic solvents, permease component [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419190|gb|AAW71205.1| ABC-type transport system involved in resistance to organic solvents, permease component [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 260 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 61/243 (25%), Positives = 114/243 (46%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG + + +L ++ +Q+ +G +P+V L GAVI Sbjct: 16 FIKLLLRLGSAFIFFIQSLYHCFVPPYYLGNIAKQIIEIGFFSLPIVGLTGIFIGAVIVL 75 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q + E L+++ ++E+G +L ++++ G+ GS+I AEIG+M+I E+IDA+ Sbjct: 76 QSSLSGPLISPEQIIPKLVTVTIIKELGPVLISLIMVGKVGSSIAAEIGTMRITEQIDAL 135 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 T+ ++ + LI+PRI A +I P+ TI A+ I G I ++ ++ Sbjct: 136 TTLNINPFKYLIAPRILASVIVFPIFTICADLIGIFGGYITAVFKFNHNLNIYIKYTTQF 195 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + N TGLIKA I + + G+ + + T+ VV S ++I+ + + Sbjct: 196 FNMYNFITGLIKATAFGAIISVSSCYYGYHCQEGARGVSIATTSTVVLSSILIILANYMI 255 Query: 365 AIF 367 + Sbjct: 256 TLI 258 >gi|299768645|ref|YP_003730671.1| toluene tolerance protein Ttg2B [Acinetobacter sp. DR1] gi|298698733|gb|ADI89298.1| toluene tolerance protein Ttg2B [Acinetobacter sp. DR1] Length = 259 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 78/264 (29%), Positives = 132/264 (50%), Gaps = 10/264 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G+ +++ I + AH+L +I + KG QM+ VGV + Sbjct: 2 NTIAWLGRLVIERIRGIGAAAHMLLQIIFSL--------PSKGGFGRFGYQMHRVGVMSL 53 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + GAV+ Q L FGAE +S+ LRE+ ++ A++ AGR+GSA+ Sbjct: 54 LIITVSGLFIGAVLGLQMYSILVTFGAESMLGTAISLTLLRELASVVAALLFAGRAGSAL 113 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIGSMK +E++ ++ +G+D ++ ++SPR+WA I+SLP+LT++ IIG +V Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIIGGKMVGVD 173 Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTG-LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + F+S +T +I G +IK+ A VA+ +G+A + + Sbjct: 174 FLGADEGSFWSGMQNTVRFGHDIINGTIIKSIVFALICTWVAVYQGYACDPTPEGIATAM 233 Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370 T VV S V+ D + F Sbjct: 234 TRTVVYSSLCVLGFDFVLTAVMFG 257 >gi|297603137|ref|NP_001053506.2| Os04g0553000 [Oryza sativa Japonica Group] gi|38345475|emb|CAE01691.2| OSJNBa0010H02.13 [Oryza sativa Japonica Group] gi|255675668|dbj|BAF15420.2| Os04g0553000 [Oryza sativa Japonica Group] Length = 344 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 50/236 (21%), Positives = 110/236 (46%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 + G+ + +L+ Q+ VG V +L + G Q + ++ G Sbjct: 98 ALLLAGQVFHRVLTGRVHRRNLLAQLRRVGPGSAGVSLLTAAFVGMAFTIQFVREFTRLG 157 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 ++++ RE+ ++TAV+ AGR GSA AE+G+M+++E+ D +R +G V Sbjct: 158 LHRSVGGVLALALSRELSPVVTAVVAAGRVGSAFAAELGTMQVSEQTDTLRVLGAQPVDY 217 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L+ PR+ A +++LP+LT+++ + ++ + + + ++ ++ + L Sbjct: 218 LVVPRVVACVLALPVLTLMSFALGLASSAFLADSIFGVSTSIILESARRALRPWDLISSL 277 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +K+ I +V+ G + +G+ T+ VV S+ + + D + +F Sbjct: 278 LKSQVFGAIIAVVSCAWGVTTHGGAKGVGESTTSAVVVSLVGIFVADFALSCLFFQ 333 >gi|307544520|ref|YP_003896999.1| ABC transporter permease [Halomonas elongata DSM 2581] gi|307216544|emb|CBV41814.1| probable ABC-type transport system permease protein [Halomonas elongata DSM 2581] Length = 260 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 70/256 (27%), Positives = 133/256 (51%), Gaps = 2/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 ++I + C+ LG + +G + +RQM++VGV + +V++ Sbjct: 3 ERIARLGRWGCNTLESLGDAGIFLVQSMFGKPSAEG-MRLWLRQMHFVGVMSLAIVLVSG 61 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L FGAE ++++ LRE+ ++ A++ AGR+GSA+ AEIG M Sbjct: 62 LFIGMVLALQGYTILVDFGAEDALGQMVALSLLRELAPVVAALLFAGRAGSALTAEIGLM 121 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D +R +++PR+WA ++LPLLTI + G +V ++ + Sbjct: 122 KATEQLTSMEMIGVDPLRRVVAPRLWAGFVALPLLTIGFGVVGVWGGQLVGVQWLGVFEG 181 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 ++ ++ A++ GLIK+ A + +A+ +G+A+ S + + T VV + Sbjct: 182 SYWGNMQASVDFIADVGNGLIKSLVFALVVTWIAVYQGYALVPTSEGISRATTRTVVYAS 241 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 242 LAVLGLDFILTAVMFG 257 >gi|186684564|ref|YP_001867760.1| hypothetical protein Npun_F4449 [Nostoc punctiforme PCC 73102] gi|186467016|gb|ACC82817.1| protein of unknown function DUF140 [Nostoc punctiforme PCC 73102] Length = 218 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 60/213 (28%), Positives = 105/213 (49%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 ++ + G + V+L+S G + Q A +L +FGAE ++ RE+ +LT Sbjct: 1 MQHLVTAGPGSISPVLLVSGFAGMIFTIQTARELVRFGAENAVGGAFALAFCRELAPILT 60 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A ++AG+ GSA AEIG+M++ E+IDA+ + D + L+ PR+ A + +PL+TILA Sbjct: 61 ASIMAGQVGSAFAAEIGAMRVTEQIDALYMLKTDPIDYLVLPRVIACCLMVPLMTILALV 120 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + IIG +Y I F + +++F L+K + ++ G Sbjct: 121 TGIIGGVFAGSYFYKIIPETFLESVRNFLEPSDLFIILLKGFIFGVLVAVIGCSWGLTTK 180 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+ T VV S + I+D ++ F Sbjct: 181 GGAKEVGESATKAVVTSWVSIFIMDFFLSLLLF 213 >gi|126643117|ref|YP_001086101.1| toluene tolerance efflux transporter [Acinetobacter baumannii ATCC 17978] Length = 235 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 64/221 (28%), Positives = 116/221 (52%), Gaps = 1/221 (0%) Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210 G + QM+ VGV + ++ + G V+ QG L G+E ++S+ LRE Sbjct: 13 GGFGRFVYQMHRVGVMSLLIITVSGLFIGLVLGLQGYSILVNVGSESMLGTMVSLTLLRE 72 Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 + ++ A++ AGR+GSA+ AEIGSMK +E++ ++ +G+D ++ ++SPR+WA I+SLP+L Sbjct: 73 LAPVVAALLFAGRAGSALTAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPML 132 Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAM 329 T++ I+G +V + + F+S + ++ G+IK+ A +A+ Sbjct: 133 TVIFAAIGIVGGKLVGVDFLGVDEGSFWSGMQNNVQFGHDVVNGIIKSIVFALLCTWIAV 192 Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +G+A + +T VV S V+ D + F Sbjct: 193 FQGYACDPTPEGIATAMTRTVVYSSLCVLGFDFVLTAVMFG 233 >gi|89054229|ref|YP_509680.1| hypothetical protein Jann_1738 [Jannaschia sp. CCS1] gi|88863778|gb|ABD54655.1| protein of unknown function DUF140 [Jannaschia sp. CCS1] Length = 260 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 64/251 (25%), Positives = 117/251 (46%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + +G + + ++ RQ +G +PVV L +F TG Sbjct: 9 ALGRATLIALATIGQIALFALDALRHLATPPFYIRETARQFLTIGWLSLPVVGLTAFFTG 68 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 +A Q ++F AE +++I RE+G +L +M+AGR +AI AEI +MK+ E Sbjct: 69 GALALQIYAGGARFNAEAVVPQIVAISIARELGPVLGGLMVAGRVAAAIAAEIATMKVTE 128 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +IDA+RT+ ++ L +PR+ A +SLP+L + + I G +V D A + S Sbjct: 129 QIDALRTLSTHPMKYLTAPRLIAATLSLPVLVAVGDSIGIFGGYLVSTSRLDFNPAAYLS 188 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 T+ ++ +GL+K + ++ G G + +G+ T VV + +++ Sbjct: 189 NTRDFLTIRDVTSGLVKGAVFGFIVALMGCYHGMNSGRGARGVGRATTQAVVSASILILA 248 Query: 360 IDSLFAIFYFA 370 + L +F+ Sbjct: 249 ANYLLTEAFFS 259 >gi|91785391|ref|YP_560597.1| ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91689345|gb|ABE32545.1| Putatitive ABC transporter, inner membrane subunit, toluene tolerance Ttg2B-like protein [Burkholderia xenovorans LB400] Length = 255 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 61/262 (23%), Positives = 130/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + ++ + +Q+++VG + Sbjct: 1 MISAIGRSVLDGLGTAGYATRFFFRLLLEFFPLLRRP-------RLVTKQIHFVGNYSLV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLTRYGSEEALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D V+I+I+PR+WA IIS+P+L + + + G +V Sbjct: 114 AEIGLMKAGEQLTAMEMMAVDPVKIVIAPRLWAGIISMPILAAIFSAVGVFGGYVVGVLL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + ++ G++K+ A+ VA+ +G+ + + T Sbjct: 174 IGVDAGAFWSQMQGGVDVWHDVGAGVVKSVVFGLAVTFVALFQGYEAKPTPEGVSRATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVYASLAVLGLDFLLTALMFS 255 >gi|296125262|ref|YP_003632514.1| hypothetical protein Bmur_0208 [Brachyspira murdochii DSM 12563] gi|296017078|gb|ADG70315.1| protein of unknown function DUF140 [Brachyspira murdochii DSM 12563] Length = 268 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 67/248 (27%), Positives = 118/248 (47%), Gaps = 2/248 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 LG E +++ L Q+ +GV V + TG V++ Q A Sbjct: 21 FLATLGEFAFLIIEVFRYTFRSSFSFKLLKEQIIRMGVDSFVVAAVTVLCTGMVMSLQIA 80 Query: 188 FQLSQF--GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 L G F ++ ++E+ +L A++ AGR GS++ AEIG+M+++E++DA++ Sbjct: 81 VVLDSVLKGISQFVGSMVGKAMVKELSPMLLALIFAGRVGSSVTAEIGTMQVSEQLDALK 140 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 T+ + + + PR WA +ISLP+LT+ AN ++G +IV +F R + Sbjct: 141 TLYTNPIEYVAVPRFWAAVISLPMLTVSANIIGVVGGAIVTVFVLHSDPMHYFDRAIAVI 200 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 ++ + LIK+ + I++ GF + +GK TT VV S I++I D + Sbjct: 201 SVGDFIGSLIKSTIFGAEVIIISCFYGFRTSGGAEGVGKATTTSVVYSFMIILITDYILV 260 Query: 366 IFYFAIGI 373 G+ Sbjct: 261 SILGLFGM 268 >gi|116749878|ref|YP_846565.1| hypothetical protein Sfum_2450 [Syntrophobacter fumaroxidans MPOB] gi|116698942|gb|ABK18130.1| protein of unknown function DUF140 [Syntrophobacter fumaroxidans MPOB] Length = 266 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 78/253 (30%), Positives = 126/253 (49%), Gaps = 4/253 (1%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKG-FLLSLIRQMYYVGVSGVPVVILISF 176 + F+ S A++ + K L + + QM VGV +P+V L+SF Sbjct: 14 TILFLRHLTSIAYLF---RDTMRWAIVKPLQGKPLRLRAALIQMDEVGVKSIPIVALVSF 70 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 V G ++ Q A+QL +FGA ++ L + RE+ LLTA+++AGR +A AE+G+M Sbjct: 71 VIGIILVLQTAYQLEKFGAINYAASLAGVALTREMAPLLTAIVVAGRVSAAFTAELGTML 130 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 + EEI A+ M ++ V L+ PR A+++ LP LT+LA+ +IG V I ++ Sbjct: 131 VTEEILALEVMAINPVAYLVVPRFIAMLVMLPCLTVLADLIGMIGGYAVGTTAVGIRSSL 190 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 + L +I TGL K+ A I +V F V + +GK VV S+ Sbjct: 191 YIQNTIDALLLKDILTGLTKSVVFAGIIAMVGCYMAFVVRGGAEGVGKATMISVVTSLIS 250 Query: 357 VIIIDSLFAIFYF 369 +I+ D F ++ Sbjct: 251 IILADCFFTTVFY 263 >gi|303246825|ref|ZP_07333102.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans JJ] gi|302491842|gb|EFL51722.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans JJ] Length = 254 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 70/246 (28%), Positives = 129/246 (52%), Gaps = 1/246 (0%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLS-LIRQMYYVGVSGVPVVILISFVTGAV 181 ++ + ++ ++ + K +L S M ++G +P++ +IS G + Sbjct: 4 GEAATLVWLVSGLMRCARGTVNPLRRTKTYLRSRTWSHMAWIGADSLPIISIISACVGII 63 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A Q A QL + GA + +L+ + E+G LLT +++AGR+G+A AEI +M+I+EEI Sbjct: 64 LALQSATQLEKVGAMSYVANLVGYSIITELGPLLTCLILAGRAGAAFTAEIATMRISEEI 123 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ MG+D VR L+ P+ A+ + PLLT+ + I I + +F + Sbjct: 124 DALEVMGVDPVRFLVWPKFAAMCVMAPLLTLWGDCIGISAGGIFSALALGLSGKAYFLQT 183 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 T+ ++ +GL+K+ I I++ +GF + +G++ T VVQSI ++I++D Sbjct: 184 AGFLTMRDLLSGLVKSAGFGVTITIISCWQGFLAREGAADVGRRTTRAVVQSIFLMILLD 243 Query: 362 SLFAIF 367 F Sbjct: 244 LFFTAL 249 >gi|59802415|ref|YP_209127.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae FA 1090] gi|194100076|ref|YP_002003216.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae NCCP11945] gi|239998068|ref|ZP_04717992.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae 35/02] gi|240079831|ref|ZP_04724374.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae FA19] gi|240112039|ref|ZP_04726529.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae MS11] gi|240116987|ref|ZP_04731049.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae PID1] gi|240122625|ref|ZP_04735581.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae PID332] gi|240127329|ref|ZP_04739990.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae SK-93-1035] gi|268593920|ref|ZP_06128087.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae 35/02] gi|268595976|ref|ZP_06130143.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae FA19] gi|268598097|ref|ZP_06132264.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae MS11] gi|268602671|ref|ZP_06136838.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID1] gi|268681221|ref|ZP_06148083.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID332] gi|268685698|ref|ZP_06152560.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae SK-93-1035] gi|59719310|gb|AAW90715.1| putative abc transport protein, inner membrane protein [Neisseria gonorrhoeae FA 1090] gi|193935366|gb|ACF31190.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae NCCP11945] gi|268547309|gb|EEZ42727.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae 35/02] gi|268549764|gb|EEZ44783.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae FA19] gi|268582228|gb|EEZ46904.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae MS11] gi|268586802|gb|EEZ51478.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID1] gi|268621505|gb|EEZ53905.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID332] gi|268625982|gb|EEZ58382.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae SK-93-1035] Length = 258 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 70/262 (26%), Positives = 130/262 (49%), Gaps = 8/262 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G K + I S L +++ +G A +RQ+Y+ GV V Sbjct: 2 NFIRSVGAKTLGLIQSFGSITLFLLNILAKSGTAFARP-------RLSVRQVYFAGVLSV 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 +V + G V+ QG QLS+F + +++ LRE+G +L A++ A +G A+ Sbjct: 55 LIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAM 114 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 +EIG MK +++A+ M ++ V +++PR WA + S+PLL + N + I GA +V Sbjct: 115 TSEIGLMKTTGQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVS 174 Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + +F+ + + T+ ++ GLIK+ A+ ++A+ +GF S + + T Sbjct: 175 WLGLDSGIFWPQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCIPTSEGILRAST 234 Query: 348 TCVVQSISIVIIIDSLFAIFYF 369 VV S ++ +D + + F Sbjct: 235 RTVVSSALTILAVDFILTAWMF 256 >gi|209516602|ref|ZP_03265456.1| protein of unknown function DUF140 [Burkholderia sp. H160] gi|209503043|gb|EEA03045.1| protein of unknown function DUF140 [Burkholderia sp. H160] Length = 255 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 131/262 (50%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + ++ + +Q+++VG + Sbjct: 1 MISAIGRAVMSGLGTAGYATRFFLRLLLEFFPLLRRP-------RLVTKQIHFVGNYSLV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D V+++I+PR+WA I+S+P+L + + ++G +V Sbjct: 114 AEIGLMKAGEQLTAMEMMAVDPVKVVIAPRLWAGIVSMPILAAIFSAVGVLGGYVVGVLL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + ++ G++K+ A+ VA+ +G+ + + T Sbjct: 174 IGVDAGAFWSQMQGGVDVWKDVGAGVVKSVVFGLAVTFVALFQGYEAKPTPEGVSRATTR 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVYASLAVLGLDFLLTALMFS 255 >gi|189218795|ref|YP_001939436.1| organic solvents resistance ABC-type transport system permease component [Methylacidiphilum infernorum V4] gi|189185653|gb|ACD82838.1| organic solvents resistance ABC-type transport system permease component [Methylacidiphilum infernorum V4] Length = 258 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 67/259 (25%), Positives = 130/259 (50%), Gaps = 7/259 (2%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + Y +G +KF+ + I L++ F + +++ FL+ Q+ +G Sbjct: 1 MIYRVGSLFIKFLK---ATGEIFFLLLDTLYSFFSFPLRWRLFLM----QILTIGAKSQI 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +V++ TGAV A Q F + G + ++++ LRE+G +L A+M++GR GSA+ Sbjct: 54 IVLVTGAFTGAVFAAQVQFHFGKLGMSSATGPVVTLAMLRELGPVLCALMVSGRVGSAMA 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEI +MK+ E+IDA+R++G+ + LI PR L++S+PLL + + I+ +V Sbjct: 114 AEISTMKVTEQIDALRSLGVYVTQYLIVPRFLGLVVSMPLLVAITSGVGILCGYLVSVPL 173 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 + A ++ +L +++ G +K F I +++ G + + +G T Sbjct: 174 LGVEPAYYWENTIRFTSLDDVWMGELKGMFFGGLIVLISCYRGLNCQLSAEGVGIAATQA 233 Query: 350 VVQSISIVIIIDSLFAIFY 368 +V S ++I + F+ Sbjct: 234 MVYSSIAILISNFFFSFLM 252 >gi|83309431|ref|YP_419695.1| ABC-type transport system [Magnetospirillum magneticum AMB-1] gi|82944272|dbj|BAE49136.1| ABC-type transport system [Magnetospirillum magneticum AMB-1] Length = 271 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 75/261 (28%), Positives = 132/261 (50%), Gaps = 2/261 (0%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 F +G++ V I + A +LG + G + L ++ Q + Sbjct: 7 PRGFIGFLDRLGRRAVAGIVEFGFGASLLGESLYWLGMGGKRRQPVR--LAPVVAQAMEI 64 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G+ +P+V ++S G ++A QG + L FGAE +++ +RE G L+T +++AGR Sbjct: 65 GIGALPIVTVLSATIGIMLAIQGIYTLRLFGAESRVSLGVAMSVVREFGPLITGILVAGR 124 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 SGSA+ A +G+M+IN+EIDA+ MG+ VR L+ P + A++ LP LT+ ++ + A Sbjct: 125 SGSALAARLGTMRINQEIDALTVMGVSPVRFLVVPPLLAMMAMLPALTLWSDLVGLFAAG 184 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 + I + L +I+ GL K+ + I +V + G +V + +G Sbjct: 185 LYIAPQLGSSMGAYVDEMTDLVRLNDIWHGLGKSAIFSVLITVVGVVNGASVTGGAEGVG 244 Query: 344 KKVTTCVVQSISIVIIIDSLF 364 + T VV +IS ++I D +F Sbjct: 245 RMTTRSVVHAISAIVITDMIF 265 >gi|224588219|gb|ACN58843.1| ABC transporter permease protein [uncultured bacterium BLR12] Length = 264 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 64/248 (25%), Positives = 118/248 (47%), Gaps = 7/248 (2%) Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171 YH+ K + F + + ++ ++ ++RQ Y +G +P++ Sbjct: 11 YHLSKSVDSFFINVAQTLRFI-------LDYFVQLFRPPYEFSEIVRQCYKIGCDSLPLI 63 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 L F+ G V +Q LS+FGA + L+ I + + L+TA++ AG+ GS+I AE Sbjct: 64 SLTGFIIGVVFTKQSRPSLSEFGATSWLPSLIGIAVFKALAPLVTALICAGKVGSSIGAE 123 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 +G+MK+ E+I+A+ + L+ R+ A + LP+L + + +++G+ + I Sbjct: 124 LGAMKVTEQIEAMDVSASKPYKYLVFTRVTACLFMLPILMLFTSLVSLMGSYLDISSNEH 183 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 I A F + ++ LIKA IG+VA +GF + +GK VV Sbjct: 184 ISLATFITNAFDKINFLDLKASLIKALVFGFTIGMVACYKGFNTIRGTEGVGKAANAAVV 243 Query: 352 QSISIVII 359 S+ ++ I Sbjct: 244 TSMYLIFI 251 >gi|23016441|ref|ZP_00056197.1| COG0767: ABC-type transport system involved in resistance to organic solvents, permease component [Magnetospirillum magnetotacticum MS-1] Length = 271 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 72/261 (27%), Positives = 132/261 (50%), Gaps = 2/261 (0%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 F +G++ I + A +LG + G + L ++ Q + Sbjct: 7 PQGFIGFLDRLGRRAAAAIAEFGFGATLLGESLYWLGMGKKRRQPVR--LAPVVAQAMEI 64 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G+ +P+V ++S G ++A QG + L FGAE +++ +RE G L+T +++AGR Sbjct: 65 GIGALPIVTVLSATIGIMLAIQGIYTLRLFGAESRVSLGVAMSVVREFGPLITGILVAGR 124 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 SGSA+ A +G+M+IN+EIDA+ MG+ VR L+ P + A+++ LP LT+ ++ + A Sbjct: 125 SGSALAARLGTMRINQEIDALTVMGVSPVRFLVVPPLLAMMVMLPALTLWSDLVGLFAAG 184 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 + I + L +++ GL K+ + I +V + G +V + +G Sbjct: 185 LYIAPQLGSSMGAYVDEMTDLVRLNDVWHGLGKSAIFSVLITLVGVVNGASVTGGAEGVG 244 Query: 344 KKVTTCVVQSISIVIIIDSLF 364 + T VV +IS +++ D +F Sbjct: 245 RLTTRSVVHAISAIVVTDMIF 265 >gi|240013249|ref|ZP_04720162.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae DGI18] gi|240015696|ref|ZP_04722236.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae FA6140] gi|240114786|ref|ZP_04728848.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae PID18] gi|240120321|ref|ZP_04733283.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae PID24-1] gi|240124812|ref|ZP_04737698.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae SK-92-679] gi|254492848|ref|ZP_05106019.1| ABC transporter inner membrane subunit [Neisseria gonorrhoeae 1291] gi|260441401|ref|ZP_05795217.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae DGI2] gi|268600440|ref|ZP_06134607.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID18] gi|268683391|ref|ZP_06150253.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae SK-92-679] gi|291044759|ref|ZP_06570468.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae DGI2] gi|293397855|ref|ZP_06642061.1| ABC transport system permease [Neisseria gonorrhoeae F62] gi|226511888|gb|EEH61233.1| ABC transporter inner membrane subunit [Neisseria gonorrhoeae 1291] gi|268584571|gb|EEZ49247.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID18] gi|268623675|gb|EEZ56075.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae SK-92-679] gi|291011653|gb|EFE03649.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae DGI2] gi|291611801|gb|EFF40870.1| ABC transport system permease [Neisseria gonorrhoeae F62] gi|317165512|gb|ADV09053.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae TCDC-NG08107] Length = 258 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 70/262 (26%), Positives = 130/262 (49%), Gaps = 8/262 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G K + I S L +++ +G A +RQ+Y+ GV V Sbjct: 2 NFIRSVGAKTLGLIQPFGSITLFLLNILAKSGTAFARP-------RLSVRQVYFAGVLSV 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 +V + G V+ QG QLS+F + +++ LRE+G +L A++ A +G A+ Sbjct: 55 LIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAM 114 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 +EIG MK +++A+ M ++ V +++PR WA + S+PLL + N + I GA +V Sbjct: 115 TSEIGLMKTTGQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVS 174 Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + +F+ + + T+ ++ GLIK+ A+ ++A+ +GF S + + T Sbjct: 175 WLGLDSGIFWPQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCIPTSEGILRAST 234 Query: 348 TCVVQSISIVIIIDSLFAIFYF 369 VV S ++ +D + + F Sbjct: 235 RTVVSSALTILAVDFILTAWMF 256 >gi|326527561|dbj|BAK08055.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 341 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 61/327 (18%), Positives = 125/327 (38%), Gaps = 6/327 (1%) Query: 52 TIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLH 111 T G L++ + + L L S R + S Sbjct: 5 TAGGALLLRPTSATTNPLLRLAIPCPKSHLLRLHSSRRRLPVLRLPLTPHATAGSNSAPS 64 Query: 112 YHIGKKIVKFINDSCS------QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 S + G+ + +L+ Q+ VG Sbjct: 65 PSPPPPPPTAPPPLFSNWTPPRAIWRGLSALLLAGQVFHRVLTGRVHRRNLLAQLRRVGP 124 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 V +L + G Q + ++ G ++++ RE+ ++TAV+ AGR G Sbjct: 125 GSAGVSLLTAAFVGMAFTIQFVREFTRLGLHRSVGGVLALALARELTPVVTAVVAAGRVG 184 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 SA AE+G+M+++E+ D +R +G + L+ PR+ A +++LP+LT+++ + ++ + Sbjct: 185 SAFAAELGTMQVSEQTDTLRVLGSQPIDYLVVPRVLACVLALPVLTLISFALGLASSAFL 244 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + + ++ ++ + LIK+ I +V+ G + +G+ Sbjct: 245 ADAVFGVSTSIILESARKALRPWDLISALIKSQVFGAIIAVVSCAWGVTTHGGAKGVGES 304 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAIG 372 T+ VV S+ + I D + +F G Sbjct: 305 TTSAVVISLVGIFIADFALSCLFFQAG 331 >gi|258592962|emb|CBE69271.1| toluene transporter subunit: membrane component of ABC superfamily [NC10 bacterium 'Dutch sediment'] Length = 256 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 74/263 (28%), Positives = 133/263 (50%), Gaps = 7/263 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N +G+ ++K + A LG S KF+ ++ Q+Y++GV Sbjct: 1 MGNPLEAVGRTVLKQVRMMGHMAIFLG---STGLWAVLPPLKFR----RIVSQIYFIGVK 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +++L + +G V+ QG + L +FG+E + + +RE+G ++ A+M+A R+GS Sbjct: 54 SSSIILLTAAFSGMVLGLQGYYTLRKFGSEALLGPAVGLSLIRELGPVMAALMVAARAGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A AEIG M+I E+IDA+ M ++ V+ L+ P++ A +IS+PLLT + + I G +V Sbjct: 114 ASAAEIGIMRITEQIDALEAMAVNPVKHLVVPKVVAGLISVPLLTAIFDVVGIFGGYLVG 173 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 K + +FS + +++I G +K+ + V +GF G + +GK Sbjct: 174 VKMLGVGAGTYFSEMRNMVEMSDIQGGFLKSLSFGLIVTWVCTYKGFYTGYGAEGVGKAT 233 Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369 T VV S +V++ + F Sbjct: 234 TEAVVLSSVLVLVWNYFMTAVLF 256 >gi|86606727|ref|YP_475490.1| hypothetical protein CYA_2087 [Synechococcus sp. JA-3-3Ab] gi|86555269|gb|ABD00227.1| conserved hypothetical protein [Synechococcus sp. JA-3-3Ab] Length = 255 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 66/239 (27%), Positives = 118/239 (49%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G G+ + + + + Q+ VG+ + +V++ + V V Q A + Sbjct: 7 VGSSFLLAGQVTLHLLRGRIHRRNTLEQLAAVGLESLLIVLITAVVISGVFTIQLAREFI 66 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 FGA +++I RE+ ++TAV++AGR GSA AE+G+MK+ E+IDA+ + D Sbjct: 67 NFGASSLIGGVLAIALARELTPVVTAVILAGRVGSAFAAELGTMKVTEQIDALYLLRTDP 126 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A + LP+LTIL+ + ++G I+ Y+IP VF + + ++ Sbjct: 127 VDYLVIPRVVAAGLMLPVLTILSLLTGLVGGMIICASVYNIPSTVFLTSAQNLLAPWDLI 186 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +KA I IV G + + +G+ T VV ++ V + + L + F Sbjct: 187 VCCLKAMVFGSLIAIVGSNWGLSTSGGAKGVGRSTTDAVVTALLGVFVTNFLISWLAFQ 245 >gi|319778667|ref|YP_004129580.1| Uncharacterized ABC transporter, permease component YrbE [Taylorella equigenitalis MCE9] gi|317108691|gb|ADU91437.1| Uncharacterized ABC transporter, permease component YrbE [Taylorella equigenitalis MCE9] Length = 258 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 69/262 (26%), Positives = 127/262 (48%), Gaps = 8/262 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 IG+ I+ I + A ++ V N +I Q++++G + Sbjct: 3 KFISRIGELIISAICAVGAFARLMWSVFLNVAFIFKRP-------SLVIEQLHFIGNHSL 55 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG LS +G+E ++S+ RE+G ++TA++ AGR+G+A Sbjct: 56 IIIAVSGLFVGFVLGLQGYHTLSMYGSEESLGLVVSLALTRELGPVVTALLFAGRAGTAT 115 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG MK E++ A+ MG++ +R ++ PR W I++P+L + + ++G +V Sbjct: 116 TAEIGLMKSGEQLAAMDVMGINPIRRILVPRFWGGTIAMPILATIFSAIGVVGGWVVGVV 175 Query: 289 YYDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 D+ F+S+ S + +I G IK+ A+ ++A+ EG+ + K T Sbjct: 176 LIDVDSGSFWSQMQSGTDIVEDILNGFIKSVVFGVAVMLIALFEGWYSVPTPEGVAKATT 235 Query: 348 TCVVQSISIVIIIDSLFAIFYF 369 VV+S V+ +D L F Sbjct: 236 HTVVKSSLCVLGLDFLLTAVMF 257 >gi|89901707|ref|YP_524178.1| hypothetical protein Rfer_2936 [Rhodoferax ferrireducens T118] gi|89346444|gb|ABD70647.1| protein of unknown function DUF140 [Rhodoferax ferrireducens T118] Length = 260 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 58/261 (22%), Positives = 122/261 (46%), Gaps = 8/261 (3%) Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171 IG + + A + +++ G + Q++++G + ++ Sbjct: 7 ADIGFAARGQLANLGLGARLFIRLLTTLGPSFKRFGLIR-------DQIHFLGNYSLAII 59 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 + G V QG + L ++G+ L+++ +RE+G ++TA++ AGR+G+++ AE Sbjct: 60 AVSGLFVGFVFGLQGYYTLQRYGSSSALGLLVTLTLVRELGPVVTALLFAGRAGTSLTAE 119 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 IG MK E+I + M +D V+ +++PR WA +I++PLL + + IIG +V Sbjct: 120 IGLMKAGEQISVMEMMAVDPVQRILAPRFWAGVITMPLLAAVFSAMGIIGGWVVGVLMIG 179 Query: 292 IPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 + F+S+ + ++ G++K+ + +A+ +GF + T V Sbjct: 180 VDGGSFWSQIQEGVDVWQDLGNGIVKSIVFGFTVTFIALLQGFEAQPTPEGVASATTRTV 239 Query: 351 VQSISIVIIIDSLFAIFYFAI 371 V + V+ +D + F + Sbjct: 240 VVASLAVLGLDFILTAMMFTV 260 >gi|254368757|ref|ZP_04984770.1| ABC-type transport system permease protein [Francisella tularensis subsp. holarctica FSC022] gi|157121678|gb|EDO65848.1| ABC-type transport system permease protein [Francisella tularensis subsp. holarctica FSC022] Length = 254 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 64/235 (27%), Positives = 121/235 (51%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + + K + I Q+ VGV+ + +++ G V++ QG + LS+FGA Sbjct: 18 LVKSLSLILRIVISKLNIRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGA 77 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 ++++ LRE+G ++TA++ AGR+ S+I +EIG MK ++I++++ M ++ + + Sbjct: 78 HSLLGVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFI 137 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 +S R WA +IS P+L ++ AI+ I+ I + F+S S+ T ++I G+I Sbjct: 138 LSTRFWACMISGPILALIFASVAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGII 197 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 K+ A +A+ +G+ SN + K T VV ++ D + F Sbjct: 198 KSIVFAFITAWIALYQGYYCIPDSNGIAKATTKTVVYCCMSILGADLILTSIMFG 252 >gi|268316272|ref|YP_003289991.1| hypothetical protein Rmar_0705 [Rhodothermus marinus DSM 4252] gi|262333806|gb|ACY47603.1| protein of unknown function DUF140 [Rhodothermus marinus DSM 4252] Length = 269 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 62/248 (25%), Positives = 120/248 (48%), Gaps = 3/248 (1%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + G ++ G F ++ + LI QM G + + G V+A Q Sbjct: 20 RAFFEKAGGLVLFMGRFFRDVWRPPYEVRELINQMDEAGSKSFILTAVTGIAIGVVLAMQ 79 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 L++FGAE +++++ +EIG ++T++++AGR G+ + AEIGSM++ E+IDA+ Sbjct: 80 SRGTLARFGAEAVLPNMLALSVFKEIGPVITSLVLAGRLGAGMAAEIGSMRVTEQIDALE 139 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 L L+ R+ A I+ P+LT N A+ G + D+ + +F++ S+ Sbjct: 140 VAALKPFHYLVITRVVACIVMFPVLTTWTNMIALAGGYVESVISADMDYRLFWNSAFSSL 199 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL-- 363 +++ +K +GIV+ G+ V + +G+ VV S ++++ D + Sbjct: 200 RFSDLIVDTLKTSVFGFLVGIVSCYLGYTVRGGTREVGQAAMQAVVISSLLILLADVVVV 259 Query: 364 -FAIFYFA 370 ++F F Sbjct: 260 RISLFLFG 267 >gi|118496937|ref|YP_897987.1| ABC-type transport system permease protein [Francisella tularensis subsp. novicida U112] gi|254372307|ref|ZP_04987798.1| hypothetical protein FTCG_01374 [Francisella tularensis subsp. novicida GA99-3549] gi|118422843|gb|ABK89233.1| ABC-type transport system permease protein [Francisella novicida U112] gi|151570036|gb|EDN35690.1| hypothetical protein FTCG_01374 [Francisella novicida GA99-3549] gi|328676409|gb|AEB27279.1| ABC-type transport system involved in resistance to organic solvents, permease component [Francisella cf. novicida Fx1] Length = 254 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 65/235 (27%), Positives = 121/235 (51%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + + K + I Q+ VGV+ + +++ G V++ QG + LS+FGA Sbjct: 18 LVKSLSLILRIVISKLNIRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGA 77 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 ++++ LRE+G ++TA++ AGR+ S+I +EIG MK ++I++++ M ++ + + Sbjct: 78 HSLLGVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFI 137 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 +S R WA +IS P+L ++ AI+ I+ I + F+S S+ T ++I G+I Sbjct: 138 LSTRFWACMISGPILALIFASVAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGII 197 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 K+ A +A+ +G+ SN + K T VV V+ D + F Sbjct: 198 KSIVFAFITAWIALYQGYYCIPDSNGIAKATTKTVVYCCMSVLGADLILTSIMFG 252 >gi|289523217|ref|ZP_06440071.1| STAS domain protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503760|gb|EFD24924.1| STAS domain protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 259 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 76/264 (28%), Positives = 129/264 (48%), Gaps = 8/264 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 +GK F++ +LG + S + + L S+ QM VGV Sbjct: 1 MVKWLETLGKATASFLD-------LLGWIASLAFHVLVHLPRARVDLRSVTDQMERVGVQ 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 V +V +IS TG V+A Q Q +FGA + ++++ +RE+ +LT +++AGR GS Sbjct: 54 SVFMVSVISAFTGMVMAVQTLDQFLKFGASGYIGGVIALSMIREMSPVLTGIVVAGRVGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 ++ AEIG+MK+ E++DA+R GLD + PRI A ++ +P+LTI + G + Sbjct: 114 SMAAEIGTMKVTEQLDALRAFGLDEYVFVGVPRILASLVMVPILTIFSMTVGTFGGYLY- 172 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + I +F + +I GL+K+ I IVA GF + +G+ Sbjct: 173 VAFRGIHPLIFKDSITLLVNVYDINGGLLKSLVYGFVISIVACACGFRAEGGAKGVGETT 232 Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370 T VV S +++I++ + + F Sbjct: 233 TLAVVWSNMLILILNYMLSTLLFG 256 >gi|313682719|ref|YP_004060457.1| hypothetical protein Sulku_1596 [Sulfuricurvum kujiense DSM 16994] gi|313155579|gb|ADR34257.1| protein of unknown function DUF140 [Sulfuricurvum kujiense DSM 16994] Length = 264 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 68/265 (25%), Positives = 121/265 (45%), Gaps = 4/265 (1%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + L +IG+ F+ + ++ F FK + ++ Q+ +G+ Sbjct: 2 VETLLGYIGR---PFVQGFEAIERFGLFILFQLQLFKLYPLTFKRY-KIVLTQIEVIGLG 57 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + V+ L + TG V A Q QFGAE F+ + RE+G + ++M+ RS S Sbjct: 58 CMGVITLTALFTGMVEAIQLYNGFHQFGAENFTGYTIFYSISRELGPVFASLMLISRSIS 117 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AE+G+M+++E+IDAI +G++ LI+PRI A +ISLPLL I +F A+ A + Sbjct: 118 AMAAELGTMRVSEQIDAIDILGVNSKEYLITPRIIATVISLPLLVIWFDFIAVGSAYFIS 177 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 I + +I TG+IKA + + G+ + +G+ Sbjct: 178 IGVLGINPVAYQDTLMRLGEFEDIMTGVIKAAVFGFIVSSIGSYIGYHTSGGARGVGQST 237 Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371 VV S + + + + + + Sbjct: 238 IYAVVYSAVAIFVTNYFLSALFLYL 262 >gi|171915264|ref|ZP_02930734.1| hypothetical protein VspiD_28855 [Verrucomicrobium spinosum DSM 4136] Length = 264 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 66/254 (25%), Positives = 120/254 (47%), Gaps = 3/254 (1%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + +G + + E + + + +Q+ +G VVI+ TGAV Sbjct: 8 GRLFLNFLIYMGQLAALLRELGIAIKSGVWRMRLVAQQIVSIGYGSQVVVIVTGAFTGAV 67 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 Q F+ FG E ++S+ RE+G +L +M+ GR G+A+ AEIG+MK+ E+I Sbjct: 68 FTAQTYFKFKDFGVETGVGAIVSVAMCRELGPVLAGLMVTGRVGAAMAAEIGTMKVTEQI 127 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+R +G+ V L+ PR +A++IS+PLL + + + V+ + +P A F+ Sbjct: 128 DALRALGVHPVDYLMLPRFFAMLISMPLLIAESITFGLAASYCVVVFGFGVPSAWFWQHV 187 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 +I G+IK I +++ +G + +G T VV S ++I + Sbjct: 188 VEHTNEEDIIYGMIKGLIFGILITVISCHQGLTASDGAVGVGIGTTRAVVYSSLALLICN 247 Query: 362 SLFAIF---YFAIG 372 ++ +F +G Sbjct: 248 FFLSLLLNYFFPLG 261 >gi|148552943|ref|YP_001260525.1| hypothetical protein Swit_0014 [Sphingomonas wittichii RW1] gi|148498133|gb|ABQ66387.1| protein of unknown function DUF140 [Sphingomonas wittichii RW1] Length = 264 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 61/251 (24%), Positives = 119/251 (47%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + +G V + + + + L Q+ +G +PVV + + +G Sbjct: 14 SIGRLFIAALAAIGRVTVFAATTISRAVRPPYYPSRLFEQLMQIGWFSLPVVGMTAIFSG 73 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 A +AQQ S+F A ++ + +RE+G +L +M+AGR SA+ AE+G+M++ E Sbjct: 74 AALAQQTFTAGSRFNATSTVPAIVVLGIVRELGPVLVGLMVAGRVSSAMAAELGTMRVTE 133 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++DA+ T+ D R LI+PR++A +I++PL+ ++AN I G V + Sbjct: 134 QLDALTTLRTDPYRYLIAPRLFAALIAIPLMVLVANAIGIFGGYFVAVYKLGFNAVGYLD 193 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 T ++ L+K+ F I ++ GF + +G+ T VV + ++++ Sbjct: 194 TTRQFLTATDLQMALVKSAFFGFFIALMGCYHGFRAQGGAAGVGRATTDAVVSAFILILL 253 Query: 360 IDSLFAIFYFA 370 + + + F Sbjct: 254 SNMIITLMAFG 264 >gi|226532225|ref|NP_001143055.1| hypothetical protein LOC100275524 [Zea mays] gi|194697070|gb|ACF82619.1| unknown [Zea mays] gi|195613586|gb|ACG28623.1| hypothetical protein [Zea mays] Length = 335 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 51/236 (21%), Positives = 110/236 (46%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 + G+ + +L+ Q+ VG V +L + G Q + ++ G Sbjct: 89 ALLLAGQVFHRVLTGRVHRRNLLAQLRRVGPGSAGVALLTAAFVGMAFTIQFVREFTRLG 148 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 ++++ RE+ ++TAV+ AGR GSA AE+G+M+++E+ D +R +G V Sbjct: 149 LHRSVGGVLALALARELSPVVTAVVAAGRVGSAFAAELGTMQVSEQTDTLRVLGAHPVDY 208 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L+ PR+ A +++LP+LT+++ + ++ + + + ++ ++ + L Sbjct: 209 LVVPRVLACVLALPVLTLISFALGLASSAFLADSVFGVSVSIILESARRALRPWDLISSL 268 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +K+ I +V+ G + +G+ T+ VV S+ + I D + +F Sbjct: 269 LKSQVFGAIIAVVSCAWGVTTHGGAKGVGESTTSAVVVSLVGIFIADFALSCLFFQ 324 >gi|108761216|ref|YP_628530.1| putative ABC transporter permease [Myxococcus xanthus DK 1622] gi|108465096|gb|ABF90281.1| putative ABC transporter, permease protein [Myxococcus xanthus DK 1622] Length = 250 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 65/249 (26%), Positives = 121/249 (48%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + + + LG + TG+ + + + L+ +GV +P+ +L + G VI Sbjct: 2 DRAKERLESLGALSRMTGQVFSRAVRPPFDWRGLVYHTESLGVRSLPIALLTAMFAGLVI 61 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + Q + LS+FG + ++ + RE+ +LTA+ + R GS I AE+G+M + E++D Sbjct: 62 SLQFGYFLSRFGVQYTVGRVVILTLFRELAPVLTALTVGARIGSGIAAELGAMTVTEQVD 121 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 AIR +G D +R L+ PR+ A +I LP+LT+ A+ ++ ++V+ Y I +FF Sbjct: 122 AIRALGADPLRKLVVPRVLACLIVLPVLTVFADVVGLVAGALVVNIQYAITLNLFFQGAL 181 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + + +G+ K IG+V G V + +G+ T V + V + D Sbjct: 182 DAVLMPDFASGVFKGAVFGLIIGLVGCFRGLTVEGGTEGVGRATTQTVATTSVSVCLADF 241 Query: 363 LFAIFYFAI 371 ++ Sbjct: 242 FITQLTLSL 250 >gi|194324165|ref|ZP_03057939.1| toluene tolerance protein Ttg2B [Francisella tularensis subsp. novicida FTE] gi|194321612|gb|EDX19096.1| toluene tolerance protein Ttg2B [Francisella tularensis subsp. novicida FTE] Length = 222 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 64/218 (29%), Positives = 118/218 (54%) Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 + I Q+ VGV+ + +++ G V++ QG + LS+FGA ++++ LRE+G Sbjct: 3 IRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGAHSLLGVMVALSVLRELG 62 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 ++TA++ AGR+ S+I +EIG MK ++I++++ M ++ + ++S R WA +IS P+L + Sbjct: 63 PVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFILSTRFWACMISGPILAL 122 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 + AI+ I+ I + F+S S+ T ++I G+IK+ A +A+ +G Sbjct: 123 IFASVAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGIIKSIVFAFITAWIALYQG 182 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + SN + K T VV V+ D + F Sbjct: 183 YYCIPDSNGIAKATTKTVVYCCMSVLGADLILTSIMFG 220 >gi|282895910|ref|ZP_06303950.1| Putative uncharacterized protein [Raphidiopsis brookii D9] gi|281199155|gb|EFA74024.1| Putative uncharacterized protein [Raphidiopsis brookii D9] Length = 238 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 57/227 (25%), Positives = 102/227 (44%) Query: 144 ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203 + K + + Q+ VG + + +L + GAV Q A + FGA ++ Sbjct: 3 LHLIRGKIHRRNTVEQLAVVGPDSLFIALLTAIFVGAVFTIQVAREFINFGAGNLVGGVL 62 Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263 ++ RE+ +LTAV++AGR GSA AEIG+M++ E+IDA+ + D + + L Sbjct: 63 AVALTRELSPVLTAVILAGRVGSAFAAEIGTMRVTEQIDALLMLKTDPIDFFSHTSSFGL 122 Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323 I+ + +G I+ Y++ VF + L +I + +IKA Sbjct: 123 FINATNFDLAIPGYWNVGRLIIATNLYNLSDTVFLDSARNFLDLRDIISAMIKAACFGIL 182 Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 I I+ G + +G+ TT VV ++ ++ I + + F Sbjct: 183 IAIIGCSWGLTTTGGAKGVGQSTTTAVVTALLVIFISNFFLSWLMFQ 229 >gi|115378323|ref|ZP_01465489.1| ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1] gi|115364677|gb|EAU63746.1| ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1] Length = 274 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 66/241 (27%), Positives = 121/241 (50%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + +LG + TG + + + +L+ ++GV +P+ +L S G VI+ Sbjct: 28 VRQRLEVLGAMAMMTGRVFSRAVRPPYDWGALVYHTEFLGVRSMPIALLTSTFAGLVISL 87 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q F L++FG + ++ + RE+ +LTA+ + R GS + AE+G+M + E++DAI Sbjct: 88 QFGFFLARFGVQYTVGRVVVLTLFRELAPVLTALTVGARIGSGMAAELGAMTVTEQVDAI 147 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R +G D +R L+ PR+ A ++ +P LT+LA+ + ++V+ Y I F +FF Sbjct: 148 RALGADPLRKLVVPRVLACLLVMPTLTVLADVIGLGAGALVVNMQYAISFDLFFQGALDA 207 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + + +G+IK IG+V +G V + +G+ T V + V + D Sbjct: 208 VLMTDFVSGVIKGAIFGVIIGLVGCFKGLTVEGGTEGVGRATTQTVAITSVSVCLADFFI 267 Query: 365 A 365 Sbjct: 268 T 268 >gi|254373781|ref|ZP_04989264.1| hypothetical protein FTDG_01565 [Francisella novicida GA99-3548] gi|151571502|gb|EDN37156.1| hypothetical protein FTDG_01565 [Francisella novicida GA99-3548] Length = 254 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 65/235 (27%), Positives = 120/235 (51%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + K + I Q+ VGV+ + +++ G V++ QG + LS+FGA Sbjct: 18 LVKALSLILRIVISKLNIRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGA 77 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 ++++ LRE+G ++TA++ AGR+ S+I +EIG MK ++I++++ M ++ + + Sbjct: 78 HSLLGVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFI 137 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 +S R WA +IS P+L ++ AI+ I+ I + F+S S+ T ++I G+I Sbjct: 138 LSTRFWACMISGPILALIFASVAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGII 197 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 K+ A +A+ +G+ SN + K T VV V+ D + F Sbjct: 198 KSIVFAFITAWIALYQGYYCIPDSNGIAKATTKTVVYCCMSVLGADLILTSIMFG 252 >gi|269128543|ref|YP_003301913.1| hypothetical protein Tcur_4348 [Thermomonospora curvata DSM 43183] gi|268313501|gb|ACY99875.1| protein of unknown function DUF140 [Thermomonospora curvata DSM 43183] Length = 285 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 59/239 (24%), Positives = 111/239 (46%) Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G + + + +K I Q +++ +L++ GA+++ Q + Q Sbjct: 41 GRFFALCLDAFRAMFKRPLQWREFIEQAWFIVSVTAIPTMLVAIPFGAILSLQVGGLIRQ 100 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 GA+ F+ + +RE L+TA++IAG +GSA+ A+IGS KI EEIDA+ +G++ + Sbjct: 101 LGAQSFTGATAVVAIVREASPLVTALLIAGAAGSAMCADIGSRKIREEIDAMEVLGINPL 160 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 L+ PR+WA L L + ++G D + + F++ A L ++ Sbjct: 161 HRLVVPRMWACAFIGLFLNGLVSVVGLVGGYFFNVVLQDGTPGAYLASFNAMAQLPDLIQ 220 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +KA G+VA +G +G V VV + ++ + + + + YF + Sbjct: 221 AEVKAFIFGLTAGLVAAYKGLNAKGGPKGVGDAVNQTVVITFMLLFVENFVISALYFQL 279 >gi|208780390|ref|ZP_03247731.1| toluene tolerance protein Ttg2B [Francisella novicida FTG] gi|208743758|gb|EDZ90061.1| toluene tolerance protein Ttg2B [Francisella novicida FTG] Length = 241 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 65/235 (27%), Positives = 120/235 (51%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + K + I Q+ VGV+ + +++ G V++ QG + LS+FGA Sbjct: 5 LVKALSLILRIVISKLNIRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGA 64 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 ++++ LRE+G ++TA++ AGR+ S+I +EIG MK ++I++++ M ++ + + Sbjct: 65 HSLLGVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFI 124 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 +S R WA +IS P+L ++ AI+ I+ I + F+S S+ T ++I G+I Sbjct: 125 LSTRFWACMISGPILALIFASVAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGII 184 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 K+ A +A+ +G+ SN + K T VV V+ D + F Sbjct: 185 KSIVFAFITAWIALYQGYYCIPDSNGIAKATTKTVVYCCMSVLGADLILTSIMFG 239 >gi|242073950|ref|XP_002446911.1| hypothetical protein SORBIDRAFT_06g024700 [Sorghum bicolor] gi|241938094|gb|EES11239.1| hypothetical protein SORBIDRAFT_06g024700 [Sorghum bicolor] Length = 338 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 50/236 (21%), Positives = 110/236 (46%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 + G+ + +L+ Q+ VG V +L + G Q + ++ G Sbjct: 92 ALLLAGQVFHRVLTGRVHRRNLLAQLRRVGPGSAGVALLTAAFVGMAFTIQFVREFTRLG 151 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 ++++ RE+ ++TAV+ AGR GSA AE+G+M+++E+ D +R +G V Sbjct: 152 LHRSVGGVLALALARELSPVVTAVVAAGRVGSAFAAELGTMQVSEQTDTLRVLGAHPVDY 211 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L+ PR+ A +++LP+LT+++ + ++ + + + ++ ++ + L Sbjct: 212 LVVPRVLACVLALPVLTLISFALGLASSAFLADSVFGVSVSIILESARRALRPWDLISSL 271 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +K+ I +V+ G + +G+ T+ VV S+ + + D + +F Sbjct: 272 LKSQVFGAIIAVVSCAWGVTTHGGAKGVGESTTSAVVVSLVGIFVADFALSCLFFQ 327 >gi|328675485|gb|AEB28160.1| ABC-type transport system permease protein [Francisella cf. novicida 3523] Length = 222 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 64/218 (29%), Positives = 118/218 (54%) Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 + I Q+ VGV+ + +++ G V++ QG + LS+FGA ++++ LRE+G Sbjct: 3 IRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGAHSLLGVMVALSVLRELG 62 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 ++TA++ AGR+ S+I +EIG MK ++I++++ M ++ + ++S R WA +IS P+L + Sbjct: 63 PVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFILSTRFWACMISGPILAL 122 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 + AI+ I+ I + F+S S+ T ++I G+IK+ A +A+ +G Sbjct: 123 IFASVAILAGFILAEATLGISYGEFWSNIQSSVTASDISNGIIKSIVFAFITAWIALYQG 182 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + SN + K T VV V+ D + F Sbjct: 183 YYCIPDSNGIAKATTKTVVYCCMSVLGADLILTSIMFG 220 >gi|116071211|ref|ZP_01468480.1| hypothetical protein BL107_16235 [Synechococcus sp. BL107] gi|116066616|gb|EAU72373.1| hypothetical protein BL107_16235 [Synechococcus sp. BL107] Length = 249 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 64/239 (26%), Positives = 114/239 (47%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + G+ ++ + + + L Q+ G + +V++IS G+V Q A +L+ Sbjct: 10 LGASLLIGGQAVTATMRGRINTVELSDQLMEAGPGSLLIVLIISVAAGSVFNIQVAAELT 69 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + GA ++++ REI LLTA ++AG+ +A A++G+MK+ E+IDAI + D Sbjct: 70 RQGAGSTVGGILALGLAREIAPLLTACLLAGKVATAYAAQLGTMKVTEQIDAITMLRTDP 129 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ AL++ PL A+ I Y+IP +VF++ + ++ Sbjct: 130 VEYLVVPRLIALVVMAPLQCFFFFIVAVWSGQITSTALYNIPPSVFWTSVRTWMHPEDLP 189 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 L+KA I ++ G +G T VV + +V I+D + F Sbjct: 190 FMLVKAVVFGLIIATISCGWGLTTRGGPKEVGTSTTGAVVMILILVCIMDVVLTQVLFG 248 >gi|296117337|ref|ZP_06835927.1| hypothetical protein GXY_16012 [Gluconacetobacter hansenii ATCC 23769] gi|295976103|gb|EFG82891.1| hypothetical protein GXY_16012 [Gluconacetobacter hansenii ATCC 23769] Length = 433 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 82/375 (21%), Positives = 153/375 (40%), Gaps = 14/375 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +E T+ +G W + D + + + + DT + Sbjct: 70 AEANRTLITLSGEW-IAQTGTTPDFPNNGLAPATKGKPLEFSTDGLGRWDTSLISFLWEL 128 Query: 62 MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + + + +L L+ +G+ Sbjct: 129 KRDARQADLSVSAETLPDSARKLLDLLPEIPPDAH--------APPPHHFAPVTAVGQFT 180 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + +N+ + + V + G A K + L+ + G + + +V +++F+ Sbjct: 181 LDTLNEIGCVSEM--GVATAKGGLAALLGKGMMRTIDLMSDVRAAGPTALVIVGVVNFLV 238 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA++A GA QL +F A+I+ L+ I +RE+ ++TA+++AGR+G A A I +M+ N Sbjct: 239 GAILAFVGAVQLHKFAADIYVASLVGIAMVREMSAVMTAIIMAGRTGGAYAARISTMQGN 298 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ G+ LI P + ALI+++PLL + + G V + ++ +F Sbjct: 299 EEIDALTVFGIPVASYLILPSVLALILTMPLLYLYGCLIGMFGGFFVSYIMLNVTPLGYF 358 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 L+ G IK+ IG+ + + G G + +G T VV I VI Sbjct: 359 HETLYAVALSQFVFGFIKSIVFGGFIGLTSCRIGLKAGRSAADVGIAATRAVVVGIVGVI 418 Query: 359 IIDSLFAIFYFAIGI 373 ID++FA+ + I Sbjct: 419 AIDAIFAVIANVLDI 433 >gi|121603597|ref|YP_980926.1| hypothetical protein Pnap_0686 [Polaromonas naphthalenivorans CJ2] gi|120592566|gb|ABM36005.1| protein of unknown function DUF140 [Polaromonas naphthalenivorans CJ2] Length = 260 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 120/259 (46%), Gaps = 8/259 (3%) Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171 +G ++ + + +++ G + Q++++G + ++ Sbjct: 7 ADVGFATRSWLANLGYGCRLFLRLLATFGSSFKRFGLVR-------DQIHFLGNYSLVII 59 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 + G V QG + L +FG+ L++ +RE+G ++TA++ AGR+G+++ AE Sbjct: 60 AISGLFVGFVFGLQGYYTLLRFGSTEALGQLVTFTLVRELGPVVTALLFAGRAGTSLTAE 119 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 IG MK E+I + M +D ++ +++PR W +I++PLL + + +IG +V Sbjct: 120 IGLMKAGEQISVMEMMAVDPIQRILAPRFWGGVITMPLLAAVFSAMGVIGGWVVGVLMLG 179 Query: 292 IPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 + F+S+ + + ++ G++K+ + +A+ +GF + T V Sbjct: 180 VDSGSFWSQIQGSVDVWRDVGNGIVKSIVFGFTVTFIALLQGFEAQPTPEGVASATTRTV 239 Query: 351 VQSISIVIIIDSLFAIFYF 369 V + V+ +D + F Sbjct: 240 VVASLAVLALDFILTAMMF 258 >gi|89255923|ref|YP_513285.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica LVS] gi|115314405|ref|YP_763128.1| toluene ABC transporter ATP-binding/membrane protein [Francisella tularensis subsp. holarctica OSU18] gi|167009174|ref|ZP_02274105.1| toluene ABC superfamily ATP binding cassette transporter, membrane protein [Francisella tularensis subsp. holarctica FSC200] gi|169656537|ref|YP_001427977.2| toluene tolerance protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|254367281|ref|ZP_04983308.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica 257] gi|290953704|ref|ZP_06558325.1| putative ABC transport system permease protein [Francisella tularensis subsp. holarctica URFT1] gi|295312939|ref|ZP_06803658.1| putative ABC transport system permease protein [Francisella tularensis subsp. holarctica URFT1] gi|89143754|emb|CAJ78956.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica LVS] gi|115129304|gb|ABI82491.1| toluene ABC superfamily ATP binding cassette transporter, membrane protein [Francisella tularensis subsp. holarctica OSU18] gi|134253098|gb|EBA52192.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica 257] gi|164551605|gb|ABU61021.2| toluene tolerance protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 254 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 64/235 (27%), Positives = 122/235 (51%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + + K + I Q+ VGV+ + +++ G V++ QG + LS+FGA Sbjct: 18 LVKSLSLILRIVISKLNIRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGA 77 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 ++++ LRE+G ++TA++ AGR+ S+I +EIG MK ++I++++ M ++ + + Sbjct: 78 HSLLGVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFI 137 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 +S R WA +IS P+L ++ AI+ + I+ I + F+S S+ T ++I G+I Sbjct: 138 LSTRFWACMISGPILALIFASVAILASFILAEAALGISYGEFWSNIQSSVTASDISNGII 197 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 K+ A +A+ +G+ SN + K T VV ++ D + F Sbjct: 198 KSIVFAFITAWIALYQGYYCIPDSNGIAKATTKTVVYCCMSILGADLILTSIMFG 252 >gi|332041054|gb|EGI77422.1| hypothetical protein HGR_06456 [Hylemonella gracilis ATCC 19624] Length = 260 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 56/241 (23%), Positives = 121/241 (50%), Gaps = 1/241 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G F + + Q++ +G + ++++ G V+ QG + L Sbjct: 20 IGRATRLFIRFWQLARPTFRRFGLVSEQIHLLGNHSLAIIVVSGLFVGFVLGLQGYYILV 79 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 FG+E ++++ +RE+G ++ A++ AGR+G+++ AEIG +K E+++A+ M +D Sbjct: 80 DFGSEQALGQMVTLSLVRELGPVVAALLFAGRAGTSLTAEIGLLKAGEQLNAMAMMAVDP 139 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NI 310 V+ +++PR WA +I+LPLLT + + ++G +V I F+ + ++ ++ ++ Sbjct: 140 VQRILAPRFWAGVIALPLLTAVFSAVGVLGGWVVGVVMIGIDPGAFWGQMQASVSVWSDV 199 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+IK+ + A+ +G+ + + T VV + V+ +D + F Sbjct: 200 GNGVIKSIVFGFTVSFTALLQGYEAQPTPEGVSRATTRTVVMASLAVLGLDFVLTALMFT 259 Query: 371 I 371 I Sbjct: 260 I 260 >gi|300871878|ref|YP_003786751.1| ABC transporter permease-like protein [Brachyspira pilosicoli 95/1000] gi|300689579|gb|ADK32250.1| ABC-type transport system permease protein-like protein [Brachyspira pilosicoli 95/1000] Length = 268 Score = 209 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 66/253 (26%), Positives = 122/253 (48%), Gaps = 2/253 (0%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N LG S + +++ L Q+ +GV V + TG V+ Sbjct: 16 NKIIILLDTLGEFASLLIQIFKYTFRPSFSFKLLTDQIVRMGVESFIVAAVTVLCTGMVM 75 Query: 183 AQQGAFQLSQF--GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 + Q A L G F ++ ++E+ +L A++ AGR GS++ AEIG+M+++E+ Sbjct: 76 SLQIAVVLDSVLKGISQFVGSMVGKAMVKELSPMLLALIFAGRVGSSVTAEIGTMQVSEQ 135 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +DA++T+ + + + PR WA +ISLP+LT+ A+ ++G ++V + A++F R Sbjct: 136 LDALKTLYTNPIEYVAVPRFWAAVISLPMLTVSADIIGVLGGAVVTVFVLNNDPAIYFDR 195 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + +L + LIK+ + +++ GF + +GK T VV S +++I Sbjct: 196 AIAVISLGDFIGSLIKSTIFGAEVILISCFYGFRTNGGAEGVGKATTISVVYSFMLILIT 255 Query: 361 DSLFAIFYFAIGI 373 D L G+ Sbjct: 256 DYLLVSILGMFGM 268 >gi|78184152|ref|YP_376587.1| hypothetical protein Syncc9902_0575 [Synechococcus sp. CC9902] gi|78168446|gb|ABB25543.1| Protein of unknown function DUF140 [Synechococcus sp. CC9902] Length = 249 Score = 209 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 65/239 (27%), Positives = 113/239 (47%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + G+ ++ + + + L Q+ G + +V +IS G+V Q A +L+ Sbjct: 10 LGSSLLIGGQAVTATMRGRINTVDLSDQLMEAGPGSLLIVFIISVAAGSVFNIQVAAELT 69 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + GA +++I REI LLTA ++AG+ +A A++G+MK+ E+IDAI + D Sbjct: 70 RQGAGSTVGGILAIGLAREIAPLLTACLLAGKVATAYAAQLGTMKVTEQIDAITMLRTDP 129 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ AL++ PL A+ I Y+IP +VF++ + ++ Sbjct: 130 VEYLVVPRLIALVVMAPLQCFFFFIVAVWSGQITSTALYNIPPSVFWTSVRTWMHPEDLP 189 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 L+KA I ++ G +G T VV + +V I+D + F Sbjct: 190 FMLVKAVVFGLIIATISCGWGLTTKGGPKEVGTSTTGAVVMILILVCIMDVVLTQVLFG 248 >gi|323343316|ref|ZP_08083543.1| ABC superfamily ATP binding cassette transporter permease protein [Prevotella oralis ATCC 33269] gi|323095135|gb|EFZ37709.1| ABC superfamily ATP binding cassette transporter permease protein [Prevotella oralis ATCC 33269] Length = 260 Score = 209 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 57/241 (23%), Positives = 109/241 (45%), Gaps = 1/241 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 G + G + + + F +++M +G+ + +V+LISF GAVI Q Sbjct: 19 LTTFGRYLILMGRSFSRPERMRMFFKQYVKEMSQLGIDSIGIVLLISFFIGAVICIQMKL 78 Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + + + L E + +++AG+ GS I +E+G+M++ ++IDA+ M Sbjct: 79 NIQSPWMPRWVSGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALDIM 138 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ LI P+I L+ +P L I ++ + I+GA + + + + Sbjct: 139 GVNSASYLILPKIMGLVTIMPFLVIFSSLTGILGAYGTAYIGHILTPEDLTLGLQHSFNP 198 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ +IK+ F A I V+ G++V S +GK T VV S +++ D Sbjct: 199 WFVWMSIIKSLFFAFIIASVSSYFGYSVEGGSVEVGKASTDAVVSSSVLILFSDVFLTQL 258 Query: 368 Y 368 Sbjct: 259 L 259 >gi|116331506|ref|YP_801224.1| membrane protein of an ABC transporter complex [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116125195|gb|ABJ76466.1| Membrane protein of an ABC transporter complex [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 259 Score = 209 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 68/241 (28%), Positives = 112/241 (46%), Gaps = 4/241 (1%) Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G I E + ++ QMY GV + VV +++ TG +++ L Sbjct: 17 GFTILLVYESILNLPHGFFKRKEILDQMYITGVGSISVVSIVAIFTGMIMSLNTGLGLKD 76 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 FGAE LM+I RE+ +TA+++A GSA+ AEIG+MKI+EEIDA+ M +D V Sbjct: 77 FGAEGQIGLLMTITLTREMSPFMTALILAASIGSAMAAEIGTMKISEEIDALEVMSIDPV 136 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA----TLA 308 R LI PRI I +P+L + + I+G +IV + I + +F L Sbjct: 137 RYLIFPRILGFSIMVPVLCVYSTILGILGGAIVGYFQLGIDYFTYFRDVFDRVASIPGLK 196 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 +++ G++K + ++ G + +G+ VV S +VI + Sbjct: 197 DLYVGILKGFIFGVIVSAISCSHGLRTSGGAIGVGRATRESVVTSFLMVIFTGYMITALL 256 Query: 369 F 369 + Sbjct: 257 Y 257 >gi|238758308|ref|ZP_04619486.1| hypothetical protein yaldo0001_1950 [Yersinia aldovae ATCC 35236] gi|238703431|gb|EEP95970.1| hypothetical protein yaldo0001_1950 [Yersinia aldovae ATCC 35236] Length = 208 Score = 209 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 62/206 (30%), Positives = 107/206 (51%), Gaps = 1/206 (0%) Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 + ++++ G V+ QG L+ + AE ++S+ LRE+G ++TA++ AGR+G Sbjct: 2 QSLLIIVVSGLFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAG 61 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 SA+ AEIG MK E+I ++ M +D +R +++PR WA +IS+PLLT + I G S+V Sbjct: 62 SALTAEIGLMKATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVV 121 Query: 286 IWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 + I F+S + ++ LIK+ A + +A+ G+ S + + Sbjct: 122 GVDWKGIDAGFFWSAMQNAVEWRTDLLNCLIKSLVFAITVTWIALFNGYDAIPTSEGISR 181 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370 T VV S V+ +D + F Sbjct: 182 ATTRTVVHSSLAVLGLDFVLTALMFG 207 >gi|288801493|ref|ZP_06406945.1| ABC transporter, permease [Prevotella sp. oral taxon 299 str. F0039] gi|288331574|gb|EFC70060.1| ABC transporter, permease [Prevotella sp. oral taxon 299 str. F0039] Length = 248 Score = 209 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 59/241 (24%), Positives = 109/241 (45%), Gaps = 1/241 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG I G + + + F I++M +GV + +V+LISF GAVI Q Sbjct: 7 LTSLGEYIMLMGRSFSRPERMRMFFKRYIKEMSSLGVDSIGIVLLISFFIGAVICIQMKL 66 Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + + + + E + ++++G+ GS I +E+G+M++ ++IDA+ M Sbjct: 67 NIQSPWMPRWVSGYTTREILILEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALDIM 126 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ LI P+I L+ +P L I ++ + I+GA + + + + Sbjct: 127 GINSASYLIMPKILGLVTIMPFLVIFSSVTGILGAYATAYIGHILSPEDLTLGLQHSFNP 186 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ +IK+ F A I V+ G+ V S +GK T VV S +++ D Sbjct: 187 WFVWMSIIKSLFFAFIIASVSSYYGYTVQGGSVEVGKSSTDAVVSSSILILFSDVFLTQI 246 Query: 368 Y 368 Sbjct: 247 L 247 >gi|300777429|ref|ZP_07087287.1| ABC superfamily ATP binding cassette transporter permease protein [Chryseobacterium gleum ATCC 35910] gi|300502939|gb|EFK34079.1| ABC superfamily ATP binding cassette transporter permease protein [Chryseobacterium gleum ATCC 35910] Length = 253 Score = 209 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 61/239 (25%), Positives = 118/239 (49%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 S G + T + ++ + L+ Q Y +G + ++ + F+ G V+ Sbjct: 4 IRSFLQETGNIAQFTKNYFLLGFRPPYEIKELLAQCYLIGYKSLGLISMTGFIIGLVLTM 63 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q L ++G E ++ I +REI ++ A++ AG+ S+I AE+GSM++ E+IDA+ Sbjct: 64 QLRPSLVRYGVESQLPVMVGIAIIREIAPVIAALIFAGKIASSIGAELGSMRVTEQIDAM 123 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 G + L++ R+ A LP+L ILA+ ++ GA I + ++F+S+ + Sbjct: 124 EVSGTHPFKYLVATRVLATTFMLPVLIILADAISLYGAWIGVNIGGTTSLSLFYSQVFDS 183 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 ++I IK+ F A+GIV +G+ + +G + VV S ++ ++D + Sbjct: 184 LDFSDIIPAFIKSFFFGFAVGIVGAYKGYNAVKGTRGVGNAANSAVVLSSILIFVLDLI 242 >gi|125549278|gb|EAY95100.1| hypothetical protein OsI_16916 [Oryza sativa Indica Group] Length = 345 Score = 209 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 50/236 (21%), Positives = 110/236 (46%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 + G+ + +L+ Q+ VG V +L + G Q + ++ G Sbjct: 99 ALLLAGQVFHRVLTGRVHRRNLLAQLRRVGPGSAGVSLLTAAFVGMAFTIQFVREFTRLG 158 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 ++++ RE+ ++TAV+ AGR GSA AE+G+M+++E+ D +R +G V Sbjct: 159 LHRSVGGVLALALSRELSPVVTAVVAAGRVGSAFAAELGTMQVSEQTDTLRVLGAQPVDY 218 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L+ PR+ A +++LP+LT+++ + ++ + + + ++ ++ + L Sbjct: 219 LVVPRVVACVLALPVLTLMSFALGLASSAFLADSIFGVSTSIILESARRALRPWDLISSL 278 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +K+ I +V+ G + +G+ T+ VV S+ + + D + +F Sbjct: 279 LKSQVFGAIIAVVSCAWGVTTHGGAKGVGESTTSAVVVSLVGIFVADFALSCLFFQ 334 >gi|116328041|ref|YP_797761.1| membrane protein of an ABC transporter complex [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116120785|gb|ABJ78828.1| Membrane protein of an ABC transporter complex [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 259 Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats. Identities = 68/241 (28%), Positives = 112/241 (46%), Gaps = 4/241 (1%) Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G I E + ++ QMY GV + VV +++ TG +++ L Sbjct: 17 GFTILLVYESILNLPHGFFKRKEILDQMYITGVGSIFVVSIVAIFTGMIMSLNTGLGLKD 76 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 FGAE LM+I RE+ +TA+++A GSA+ AEIG+MKI+EEIDA+ M +D V Sbjct: 77 FGAEGQIGLLMTITLTREMSPFMTALILAASIGSAMAAEIGTMKISEEIDALEVMSIDPV 136 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA----TLA 308 R LI PRI I +P+L + + I+G +IV + I + +F L Sbjct: 137 RYLIFPRILGFSIMVPVLCVYSTILGILGGAIVGYFQLGIDYFTYFRDVFDRVASIPGLK 196 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 +++ G++K + ++ G + +G+ VV S +VI + Sbjct: 197 DLYVGILKGFIFGVIVSAISCSHGLRTSGGAIGVGRATRESVVTSFLMVIFTGYMITALL 256 Query: 369 F 369 + Sbjct: 257 Y 257 >gi|163739574|ref|ZP_02146983.1| hypothetical protein RGBS107_12532 [Phaeobacter gallaeciensis BS107] gi|163741440|ref|ZP_02148831.1| membrane protein [Phaeobacter gallaeciensis 2.10] gi|161385174|gb|EDQ09552.1| membrane protein [Phaeobacter gallaeciensis 2.10] gi|161387033|gb|EDQ11393.1| hypothetical protein RGBS107_12532 [Phaeobacter gallaeciensis BS107] Length = 266 Score = 209 bits (532), Expect = 7e-52, Method: Composition-based stats. Identities = 58/254 (22%), Positives = 116/254 (45%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + + +G V + + + L+ + VG +PVV L + Sbjct: 13 LARLGQMVLAGLGAVGRVTLFGLSTFSHMLRPPYYPRELLNALLQVGWLSLPVVGLTAIF 72 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TGA +A Q ++F AE +++I +RE+G +L +MIA R S+I AEI +MK+ Sbjct: 73 TGAALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKV 132 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+ T+ ++ L++PR+ A +I++P+L + + I+G +V + A + Sbjct: 133 TEQIDALVTLSTHPMKYLVAPRVLAALITVPVLVGVGDIIGIMGGYVVATQNLGFNPAAY 192 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 L +I + L+K + G G + +G+ V + ++ Sbjct: 193 LKNTVDFLELRDIVSSLVKGAAFGTIAATMGCYYGMQSGRGAQGVGRATKGSVEAAAVLI 252 Query: 358 IIIDSLFAIFYFAI 371 + + + +F++ Sbjct: 253 LAANFVLTGIFFSL 266 >gi|223937293|ref|ZP_03629199.1| protein of unknown function DUF140 [bacterium Ellin514] gi|223894078|gb|EEF60533.1| protein of unknown function DUF140 [bacterium Ellin514] Length = 244 Score = 209 bits (532), Expect = 7e-52, Method: Composition-based stats. Identities = 66/244 (27%), Positives = 116/244 (47%), Gaps = 2/244 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +G ++ S Q + +G + + +V ++SF G VIA Sbjct: 1 MFQNIGELMLLFWRTVRSLPLVWRQRQKTFDQFFEIGNASLLMVCILSFFIGGVIALLTG 60 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L + G L+ I +E+ ++ +++IAGR GS++ AEIGSM++ +EIDA+RTM Sbjct: 61 PVLVERGLTNSVGGLVGISMAKELAPVMMSILIAGRIGSSMTAEIGSMRVYQEIDALRTM 120 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI--PFAVFFSRFHSTA 305 ++ + L+ PR+ A+ ++LPLL I + G ++V + I F FF+ Sbjct: 121 NINPIHYLVLPRLTAIAVALPLLVIFSILVGWGGGALVSALNHKIAVSFQAFFTNLREVV 180 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 ++ GL+K+ A IG+V +G +G+ VT VV I +++I+D Sbjct: 181 DFGDVINGLVKSFIFALVIGVVCCHQGLQTIGGPRGIGRSVTKAVVNCIVLIVILDYFLT 240 Query: 366 IFYF 369 Sbjct: 241 RLML 244 >gi|56708629|ref|YP_170525.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110671100|ref|YP_667657.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis FSC198] gi|134301425|ref|YP_001121393.1| ABC-type transporter involved in resistance to organic solvents, permease protein [Francisella tularensis subsp. tularensis WY96-3418] gi|224457822|ref|ZP_03666295.1| ABC-type transporter involved in resistance to organic solvents, permease protein [Francisella tularensis subsp. tularensis MA00-2987] gi|254371262|ref|ZP_04987264.1| toluene ABC superfamily ATP binding cassette transporter [Francisella tularensis subsp. tularensis FSC033] gi|254875493|ref|ZP_05248203.1| toluene ABC superfamily ATP binding cassette transporter [Francisella tularensis subsp. tularensis MA00-2987] gi|56605121|emb|CAG46242.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110321433|emb|CAL09625.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis FSC198] gi|134049202|gb|ABO46273.1| ABC-type transporter involved in resistance to organic solvents, permease protein [Francisella tularensis subsp. tularensis WY96-3418] gi|151569502|gb|EDN35156.1| toluene ABC superfamily ATP binding cassette transporter [Francisella tularensis subsp. tularensis FSC033] gi|254841492|gb|EET19928.1| toluene ABC superfamily ATP binding cassette transporter [Francisella tularensis subsp. tularensis MA00-2987] gi|282159866|gb|ADA79257.1| ABC-type transporter involved in resistance to organic solvents, permease protein [Francisella tularensis subsp. tularensis NE061598] Length = 254 Score = 208 bits (531), Expect = 8e-52, Method: Composition-based stats. Identities = 64/235 (27%), Positives = 120/235 (51%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + + K + I Q+ VGV+ + +++ G V++ QG + LS+FGA Sbjct: 18 LVKSLSLILRIVISKLNIRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGA 77 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 ++++ LRE+G ++TA++ AGR+ S+I +EIG MK ++I++++ M ++ + + Sbjct: 78 HSLLGVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFI 137 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 +S R WA +IS P+L ++ AI+ I+ I + F+S S+ ++I G+I Sbjct: 138 LSTRFWACMISGPILALIFASVAILAGFILAEAALGISYGEFWSNIQSSVIASDISNGII 197 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 K+ A +A+ +G+ SN + K T VV V+ D + F Sbjct: 198 KSIVFAFITAWIALYQGYYCIPDSNGIAKATTKTVVYCCMSVLGADLILTSIMFG 252 >gi|167835250|ref|ZP_02462133.1| ABC transporter, permease protein [Burkholderia thailandensis MSMB43] Length = 281 Score = 208 bits (531), Expect = 8e-52, Method: Composition-based stats. Identities = 85/286 (29%), Positives = 144/286 (50%), Gaps = 6/286 (2%) Query: 88 THRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSY 147 R + P+ + G+ + F +LG +I + Sbjct: 1 IERLDAGREAPEPVVRIDPVTRF----GQGLFTFGEHLYGGIALLGGLIVDLLSVLRRPR 56 Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 + +Y G +P+ L++F+ G V++ A QL FGA + ++++ + Sbjct: 57 TMP--WTEISANVYAAGAKALPITALVAFLIGIVLSYLSAQQLQLFGANRYIVNILGLSV 114 Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267 +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R MG+ + PR+ AL +++ Sbjct: 115 IRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVMGIPHGLRITLPRVLALGVAM 174 Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327 PLL + N A+ G ++ I F S +AN+F GL K I +V Sbjct: 175 PLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSLPSVVPIANLFIGLGKGVVFGMLIALV 234 Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 A GF + +S SLG+ TT VV SI++VI+ D++FAI + +G+ Sbjct: 235 ACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAILFQNVGL 280 >gi|87120456|ref|ZP_01076350.1| hypothetical protein MED121_21902 [Marinomonas sp. MED121] gi|86164099|gb|EAQ65370.1| hypothetical protein MED121_21902 [Marinomonas sp. MED121] Length = 260 Score = 208 bits (531), Expect = 8e-52, Method: Composition-based stats. Identities = 68/248 (27%), Positives = 123/248 (49%), Gaps = 2/248 (0%) Query: 125 SCSQAHILGLV-ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 + + G + G + L++Q+Y VGV + ++++ G V+ Sbjct: 11 ALNTIGAFGQAGLFLIQVMLHRPKSLSGAMGLLMKQIYSVGVLSLVIILVSGLFIGMVLG 70 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 QG L++FG+E L+++ LRE+G ++TA++ AGR+ SA+ AEIG MK E++ + Sbjct: 71 LQGYTILAKFGSEQAVGQLLALTLLRELGPVVTALLFAGRACSALTAEIGLMKATEQLSS 130 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG+D R +I+PR A +I LP+L ++ + I+G V + I F+S Sbjct: 131 LEMMGVDPYRRIIAPRFIAGLICLPILCVIFSAVGILGGEFVAVTWLQIHGGSFWSLMQQ 190 Query: 304 TATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + + ++ G+IKA A A +A+ +G+ S +GK T VV ++ +D Sbjct: 191 SVYFSTDVVNGIIKAFCFAIATTWIAVFQGYQCEPTSEGIGKATTRTVVLGSLSILALDF 250 Query: 363 LFAIFYFA 370 + Sbjct: 251 ILTAAMIG 258 >gi|255070247|ref|XP_002507205.1| ATP-binding cassette superfamily [Micromonas sp. RCC299] gi|226522480|gb|ACO68463.1| ATP-binding cassette superfamily [Micromonas sp. RCC299] Length = 297 Score = 208 bits (531), Expect = 8e-52, Method: Composition-based stats. Identities = 55/224 (24%), Positives = 109/224 (48%) Query: 147 YKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206 + K + ++Q+ VG + V +L S G V Q + S+ G L+ + Sbjct: 73 WHRKLNMQQTLQQISRVGPDTLGVSMLTSSFVGMVFTIQFCKEFSKVGLTRVIGGLLGLA 132 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 RE+ ++ A+++AGR GSA+ AE+G+M+++E++D +RT+G D V L++PR+ A +S Sbjct: 133 FTRELTPVICAIVLAGRVGSAVAAELGTMQVSEQVDQLRTLGSDPVDYLVAPRVVACAVS 192 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326 LP+L++++ + + ++ Y I ++ K I I Sbjct: 193 LPILSVISFTIGMAASILLADIRYGISPNAIVDSAAKYLESFDVGVMCAKGFAFGSVISI 252 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 ++ G + +G+ T VV S+ + ++D ++F+F Sbjct: 253 ISCGWGQTTTGGAKGVGESTTASVVISLVAIFVVDFFLSMFFFK 296 >gi|86609938|ref|YP_478700.1| hypothetical protein CYB_2505 [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558480|gb|ABD03437.1| putative membrane protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 252 Score = 208 bits (531), Expect = 8e-52, Method: Composition-based stats. Identities = 66/239 (27%), Positives = 119/239 (49%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G G+ + + + + Q+ VG+ + +V++ + V V Q A + Sbjct: 4 VGSSFLLAGQVILHLMRGRIHRRNTLDQLSAVGLESLLIVLITAVVISGVFTIQLAREFI 63 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 FGA +++I RE+ ++TAV++AGR GSA AE+G+MK+ E+IDA+ + D Sbjct: 64 NFGASSLIGGVLAIALARELTPVVTAVILAGRVGSAFAAELGTMKVTEQIDALLLLRTDP 123 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A + LP+LTIL+ + ++G I+ Y+I AVF + + + ++ Sbjct: 124 VDYLVIPRVLAAGLMLPVLTILSLLTGLVGGMIICASAYNISPAVFLNSAQTLLSSWDLL 183 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +KA I IV G + + +G+ T VV ++ V + + L + F Sbjct: 184 VCCLKAMVFGSLIAIVGSNWGLSTSGGAKGVGRSTTDAVVTALLGVFVTNFLISWLLFQ 242 >gi|88658302|ref|YP_506914.1| hypothetical protein ECH_0084 [Ehrlichia chaffeensis str. Arkansas] gi|88599759|gb|ABD45228.1| conserved hypothetical protein [Ehrlichia chaffeensis str. Arkansas] Length = 275 Score = 208 bits (531), Expect = 9e-52, Method: Composition-based stats. Identities = 60/259 (23%), Positives = 118/259 (45%), Gaps = 7/259 (2%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 L IG+ ++ I + + N + + +++Q + +P Sbjct: 23 LLETIGRYVINVIFNVGHSFIFFVKFVYNC-------FVPPYYYGVILKQFIEIFFFSLP 75 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +V + + TGAV+ Q + + + F ++ + +RE+G +L ++IAGR G+AI Sbjct: 76 IVGITAIFTGAVLILQNSLIIHNNVSGDFVSGVVVVAIVRELGPVLIGLIIAGRVGAAIA 135 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG+M+I E+IDA+ T+ + + L+ PRI + ++++P+L + A+ G IV Sbjct: 136 AEIGTMRITEQIDALFTLDTNPFKYLVVPRIISAMVAMPILILCADLIGAYGGYIVGSYQ 195 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 ++ ++ GL+KA I + G+ + +G T Sbjct: 196 LGYTSEMYIKGVIKFLHAKDVALGLVKATVFGFIISFMGCYSGYYCSGGARGVGLATTYV 255 Query: 350 VVQSISIVIIIDSLFAIFY 368 VV S +I+ + + +FY Sbjct: 256 VVVSSMFIILFNYIITVFY 274 >gi|282860201|ref|ZP_06269275.1| conserved hypothetical protein [Prevotella bivia JCVIHMP010] gi|282587022|gb|EFB92253.1| conserved hypothetical protein [Prevotella bivia JCVIHMP010] Length = 248 Score = 208 bits (531), Expect = 9e-52, Method: Composition-based stats. Identities = 63/245 (25%), Positives = 112/245 (45%), Gaps = 1/245 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G + G + + + FL S IR+M +GV + +V+LISF GAVI Sbjct: 3 IVNWLTSFGKYLMLMGRTFSRPERIRMFLKSYIREMSQLGVDSIGIVLLISFFIGAVICI 62 Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + + ++ + L E + ++++G+ GS I +E+G+M++ ++IDA Sbjct: 63 QIRLNVQSPWMPHWVSGYVTREIMLLEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDA 122 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I L+ +P L I + + ++GA + + I + Sbjct: 123 LEIMGINSASYLILPKILGLVTIMPFLVIFSAATGMLGAYATAYIGHIISPSDLTDGVQH 182 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 ++ +IK+ F A I VA G+ V S +GK T VV S +V+ D Sbjct: 183 QFNQWFMWMSIIKSLFFAFIIASVAAYMGYTVKGGSQEVGKASTDAVVTSSVLVLFSDVF 242 Query: 364 FAIFY 368 Sbjct: 243 LTQIL 247 >gi|159026095|emb|CAO86324.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 288 Score = 208 bits (531), Expect = 9e-52, Method: Composition-based stats. Identities = 61/267 (22%), Positives = 115/267 (43%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 ++ +++ + + F + S L I TG + K QM Sbjct: 11 FSLVRSILVAMKDLLAIFSKELSSWFRRCWLAILLTGRVFYFLFTRKPDWRVTQEQMVAA 70 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G + + + ++ + V G + Q A + GA ++++ RE+ ++ A+++AGR Sbjct: 71 GPASLIIAMITAAVIGMIFTIQVAREFQALGAGSMVGGILALALGRELCPIMMAIVVAGR 130 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 GSA AEIG+MK+ E+IDA+ + D V L+ PR+ A + +P L+I+A + Sbjct: 131 VGSAFAAEIGTMKVTEQIDALYMLKTDPVEYLVLPRLIACCLMVPALSIMALLIGLGSGL 190 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 +V Y I +VF + ++ +G +K I I+ G + +G Sbjct: 191 LVGQSLYGIANSVFLDSVRGFLRVGDVLSGPVKGLVFGALIAIIGCNWGLTTDGGAKGVG 250 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370 + T VV + + + + L F Sbjct: 251 QATTAAVVTMLLAIFVSNLLMTWILFQ 277 >gi|89068948|ref|ZP_01156330.1| membrane protein [Oceanicola granulosus HTCC2516] gi|89045529|gb|EAR51593.1| membrane protein [Oceanicola granulosus HTCC2516] Length = 258 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 58/264 (21%), Positives = 117/264 (44%), Gaps = 7/264 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 L IG + + + +S+ + + F +++ VG Sbjct: 1 MTGLLARIGAATLALLAGIGRMVIFVAETLSH---LVRPPFYAREFGHAVMS----VGWQ 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PVV L +F TG +A Q ++F AE ++++ +RE+G +L +MIA R S Sbjct: 54 SLPVVGLTAFFTGGALALQIYSGGARFSAEALVPQIVAVGMVRELGPVLVGLMIAARVTS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 +I AEI +MK+ E++DA+ T+ + ++ L PR+ A ++++P+L + + I G +V Sbjct: 114 SIAAEIATMKVTEQLDALVTLSTNPMKYLTLPRVLAALLTVPVLVAVGDVIGIFGGYLVG 173 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 D A + + ++ + L+K + G + +G+ Sbjct: 174 IYRLDFNPANYITNTVDFLEAHDVISSLVKGGAFGLIAALTGCYYGMQSDRGAQGVGRAT 233 Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370 T VV + +++ + L +F+ Sbjct: 234 KTAVVVAAVLILAANFLLTEAFFS 257 >gi|187931162|ref|YP_001891146.1| ABC-type transport system permease protein [Francisella tularensis subsp. mediasiatica FSC147] gi|187712071|gb|ACD30368.1| ABC-type transport system permease protein [Francisella tularensis subsp. mediasiatica FSC147] Length = 254 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 65/235 (27%), Positives = 120/235 (51%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + + K + I Q+ VGV+ + +++ G V++ QG + LS+FGA Sbjct: 18 LVKSLSLILRIVISKLNIRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGA 77 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 ++++ LRE+G ++TA++ AGR+ S+I +EIG MK ++I++ + M ++ + + Sbjct: 78 HSLLGVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKATDQINSFKVMNVNPISFI 137 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 +S R WA +IS P+L ++ AI+ I+ I + F+S S+ T ++I G+I Sbjct: 138 LSTRFWACMISGPILALIFASVAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGII 197 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 K+ A +A+ +G+ SN + K T VV V+ D + F Sbjct: 198 KSIVFAFITAWIALYQGYYCIPDSNGIAKATTKTVVYCCMSVLGADLILTSIMFG 252 >gi|196228069|ref|ZP_03126936.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428] gi|196227472|gb|EDY21975.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428] Length = 260 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 68/248 (27%), Positives = 117/248 (47%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + S LG + + E C S ++RQ+ VG VV++ Sbjct: 2 VTTIGRIALSLLQYLGELATLVSETCVSLVVAPIRWRLVLRQIVEVGWRSQMVVVVTGGF 61 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TGAV+A Q FQ S+ G + ++++ RE+ +LT +M++GR G+AI AEIG+MK+ Sbjct: 62 TGAVLAAQAYFQFSRLGMKSAVGSMVAVSMFRELAPVLTGLMVSGRVGAAIAAEIGTMKV 121 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+R++G+ L+ PR+ AL+ S+PLL +++ ++ DI A + Sbjct: 122 TEQIDALRSLGVHPTDYLVVPRVLALLFSMPLLVAECCAVSVLAGYVLGVHVLDISAAYY 181 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 A ++ L K I +A +G + +G+ T VV V Sbjct: 182 VRNMLLYAGPRDLKMALTKGLVFGIVIVFIACHQGLKTSNGAVGVGRAPTEAVVNGSLAV 241 Query: 358 IIIDSLFA 365 +I++ Sbjct: 242 LILNFFLT 249 >gi|126740431|ref|ZP_01756119.1| membrane protein [Roseobacter sp. SK209-2-6] gi|126718567|gb|EBA15281.1| membrane protein [Roseobacter sp. SK209-2-6] Length = 260 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 55/254 (21%), Positives = 115/254 (45%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + + +G V ++ + ++ + VG +PVV L + Sbjct: 7 LARLGRMALGALAAIGRVTLFALSTFTHMFRPPYYPREVLLSLLQVGWLSLPVVGLTAVF 66 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG +A Q ++F AE +++I +RE+G +L +MIA R S+I AEI +MK+ Sbjct: 67 TGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKV 126 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+ T+ + ++ L++PR+ A ++++P+L + + I G V D A + Sbjct: 127 TEQIDALVTLSTNPMQYLVAPRVLAALVTVPVLVGVGDIIGIAGGYTVAVYNLDFNSAAY 186 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 ++ + L+K F + G G + +G+ + V + ++ Sbjct: 187 LKNTVDFLEPLDLISSLVKGAFFGTIAATMGCYYGMQSGRGAQGVGRATKSSVEAAAVLI 246 Query: 358 IIIDSLFAIFYFAI 371 + + + +F++ Sbjct: 247 LAANFILTGVFFSL 260 >gi|255034005|ref|YP_003084626.1| hypothetical protein Dfer_0190 [Dyadobacter fermentans DSM 18053] gi|254946761|gb|ACT91461.1| protein of unknown function DUF140 [Dyadobacter fermentans DSM 18053] Length = 262 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 61/210 (29%), Positives = 111/210 (52%) Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209 + +++Q Y +G + ++ L F+TG V +Q LS+FGA + L++I +R Sbjct: 39 RMEFQEIVKQCYAIGNKSLLLISLTGFITGMVFTKQSRPSLSEFGATSWLPSLVAIAIVR 98 Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 + L+TA++ AG+ GS+I AE+GSM++ E+IDA+ ++ + L+ R+ A I++P+ Sbjct: 99 ALAPLVTALISAGKIGSSIGAELGSMRVTEQIDAMEVSAVNPFKFLVVTRVVACTIAIPV 158 Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329 L +++GA + + F FF T +I+T + KA IGIV Sbjct: 159 LMFYCALVSLLGAYLNVTLNEGTSFIAFFENAFEQITFLDIWTSVAKAIAYGFTIGIVGS 218 Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 +G+ + +GK + VV S+ ++ I Sbjct: 219 YQGYNASKGTEGVGKAANSAVVTSMFLIFI 248 >gi|313109004|ref|ZP_07794978.1| hypothetical protein PA39016_001650017 [Pseudomonas aeruginosa 39016] gi|310881480|gb|EFQ40074.1| hypothetical protein PA39016_001650017 [Pseudomonas aeruginosa 39016] Length = 240 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 94/241 (39%), Positives = 144/241 (59%), Gaps = 2/241 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G +I +++ S+I Q+ V +P+V L+SF+ G V+A GA L+ Sbjct: 1 MGQIIETWSRTVRHPRRWRA--TSVIAQIQRSAVDAIPIVALLSFMVGMVVAFLGATVLA 58 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 FGA IFS+ L++ +RE GVLL A++IAGR+ SA A+IGSMK NEEIDA+R+ LD Sbjct: 59 NFGASIFSVHLVAFSFMREFGVLLPAILIAGRTASAYTAQIGSMKANEEIDALRSNALDP 118 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 + +L+ PR+ AL++SLPLLT++ + I G + V +IP A F + + + Sbjct: 119 IELLVLPRVLALLVSLPLLTLVGILAGIAGGATVCALSLEIPPAQFLAIVQEKIEVRHFL 178 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 G+ K+P A I + EGF V + S+G T+ VVQSI +VI+ID++ A+F+ + Sbjct: 179 VGMSKSPLFAVMIAAIGCHEGFKVAGSAESVGDHTTSSVVQSIFMVILIDAIAALFFMEM 238 Query: 372 G 372 G Sbjct: 239 G 239 >gi|317050884|ref|YP_004112000.1| hypothetical protein Selin_0700 [Desulfurispirillum indicum S5] gi|316945968|gb|ADU65444.1| protein of unknown function DUF140 [Desulfurispirillum indicum S5] Length = 256 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 76/254 (29%), Positives = 126/254 (49%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + G++ ++ L + +Q +GV+ + VV+L Sbjct: 3 RILNSLGQGMYHAMQVSGMIFFTFLHSALWLFRPPLRLRVIFKQFESIGVNSIFVVLLTG 62 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 TG V+A Q SQF AE + ++ RE+G +LTA+M+ R+GSA+ AE+G+M Sbjct: 63 TFTGMVLALQLYIGFSQFHAEYLVGAVSALAIFRELGPVLTALMVTARAGSAMAAELGTM 122 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K+ E+IDA+RTM +D + L +PRI A + LP+LT++AN AI G V K I Sbjct: 123 KVTEQIDALRTMAVDPHQYLATPRILASFVMLPVLTMVANAVAIGGCYFVGVKLLGINPV 182 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 VF + + +I GLIK+ +G V G + +G+ TT VV + + Sbjct: 183 VFVDQIIIFVDMGDIINGLIKSAAFGLVMGSVCCGIGMNASKGAAGVGQATTTSVVLTST 242 Query: 356 IVIIIDSLFAIFYF 369 +++ +D + F Sbjct: 243 LILAVDYILTALMF 256 >gi|260910011|ref|ZP_05916695.1| ABC superfamily ATP binding cassette transporter, permease protein [Prevotella sp. oral taxon 472 str. F0295] gi|260635870|gb|EEX53876.1| ABC superfamily ATP binding cassette transporter, permease protein [Prevotella sp. oral taxon 472 str. F0295] Length = 248 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 58/245 (23%), Positives = 110/245 (44%), Gaps = 1/245 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + LG + G + + + F +++M +GV V +V+LISF GAVI Sbjct: 3 ILNYLNTLGQYLILMGRSFSRPERMRMFFKRYVKEMSQLGVDSVGIVLLISFFIGAVICI 62 Query: 185 QGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + + + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 63 QMKLNIQSPWMPRWVSGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 122 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P++ L+ +P L I ++ I+GA + + + Sbjct: 123 LDIMGVNSASYLILPKVLGLVTIMPFLVIFSSAMGILGAYATAYIGHILTPDDLTLGIQH 182 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++ ++K+ F A I V+ G+ V S +GK T VV S +++ D Sbjct: 183 SFNPWFMWMSIVKSLFFAYIIASVSSYFGYTVEGGSVEVGKASTDAVVSSSVLILFSDVF 242 Query: 364 FAIFY 368 Sbjct: 243 LTQML 247 >gi|289806792|ref|ZP_06537421.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 212 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 1/211 (0%) Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 Y VGV + ++I+ G V+ QG L+ + AE L+++ LRE+G ++ A++ Sbjct: 1 YNVGVLSMLIIIVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLF 60 Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280 AGR+GSA+ AEIG M+ E++ ++ M +D +R +ISPR WA +ISLPLLTI+ I Sbjct: 61 AGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIW 120 Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339 G S+V + I F+S + ++ LIK+ A + +A+ G+ S Sbjct: 121 GGSLVGVSWKGIDAGFFWSAMQNAVDWRMDLVNCLIKSVVFAITVTWIALFNGYDAIPTS 180 Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D + F Sbjct: 181 AGISRATTRTVVHASLAVLGLDFVLTALMFG 211 >gi|260435355|ref|ZP_05789325.1| ABC-type transport system, permease component [Synechococcus sp. WH 8109] gi|260413229|gb|EEX06525.1| ABC-type transport system, permease component [Synechococcus sp. WH 8109] Length = 249 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 66/239 (27%), Positives = 115/239 (48%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + G+ A++ + + L QM G + +V++IS G+V Q A +L+ Sbjct: 10 LGTSLLIGGQAVAATLRGRINRGELFEQMLEAGPGSLLIVLIISVAAGSVFNIQVAAELT 69 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + GA +++I REI LLT+ ++AG+ +A A++G+MK+ E+IDAI + D Sbjct: 70 RQGAGSTVGGILAIGLAREIAPLLTSCLLAGKVATAYAAQLGTMKVTEQIDAITMLRTDP 129 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A+++ P+ F A+ + Y+IP AVF++ + ++ Sbjct: 130 VEYLVVPRMIAMVVMAPVQCFFFFFVAVWSGQLTSTALYNIPPAVFWTSVQTWMNPLDLP 189 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 L+KA I VA G +G T VV + +V ++D + F Sbjct: 190 FMLVKALVFGLIIATVACGWGLTTRGGPKEVGTSTTGAVVMILILVALMDVVLTQVLFG 248 >gi|114798102|ref|YP_759452.1| hypothetical protein HNE_0724 [Hyphomonas neptunium ATCC 15444] gi|114738276|gb|ABI76401.1| putative membrane protein [Hyphomonas neptunium ATCC 15444] Length = 261 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 72/267 (26%), Positives = 132/267 (49%), Gaps = 7/267 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 +N IG+ + + +G + G +++ + + ++RQ+ +G Sbjct: 2 MQNPIQLIGRATLGLFGE-------VGRLAVFAGRVKGAAFTPRWYGGEILRQIVRIGFY 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PVV L + GA +A S++GAE F ++ + RE+GV++T +M+AGR + Sbjct: 55 SLPVVGLAAVFIGAALALNIYEGGSRYGAEQFVPSIVVLGITRELGVVITGLMLAGRVSA 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 I AEIG+M++ E+IDA+ T+ R L +PR A +I+LP+L LA+ ++G +V Sbjct: 115 GIAAEIGAMRVTEQIDALETLSASRYRYLYAPRFIAALITLPMLVALADIIGVMGGWLVS 174 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 D V+ TL +IF GLIKA I I+ +G + +G+ Sbjct: 175 VYGLDFDSTVYLRNTLDFLTLNDIFAGLIKAVVFGGVIAIMGCYQGDRSQAGATGVGRAA 234 Query: 347 TTCVVQSISIVIIIDSLFAIFYFAIGI 373 T +V + +++ + + + + IG+ Sbjct: 235 TLSMVGAAVLILAFNYVMSTVFVEIGL 261 >gi|226305212|ref|YP_002765170.1| YrbE family protein [Rhodococcus erythropolis PR4] gi|229490705|ref|ZP_04384543.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] gi|226184327|dbj|BAH32431.1| putative YrbE family protein [Rhodococcus erythropolis PR4] gi|229322525|gb|EEN88308.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] Length = 264 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 115/245 (46%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 G ++ + ++++ I Q +++ + L++ GAV++ Q Sbjct: 14 GALTQAGNIVELFVDVVRNTFRRPFQFREFIEQAWFIASVTILPTALVAIPFGAVVSLQT 73 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 + Q GAE F+ + +++ L+TA+++AG +GSA+ A++GS I EEIDA+ Sbjct: 74 GSLIKQLGAESFTGAASVLAVIQQGSPLVTALLVAGAAGSAVTADLGSRTIREEIDAMEV 133 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +G++ ++ L+ PR+ A+++ LL L + I G + S F + A Sbjct: 134 LGINPIQRLVVPRVLAMVLIAVLLNGLVSVVGIAGGYFFNVILQGGNPGAYISSFSAFAQ 193 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L +I++G IKA G+++ +G +G+ V VV + ++ + + + Sbjct: 194 LPDIWSGEIKAAVFGVIAGVISAYKGLHPSGGPKGVGEAVNQAVVITFLLLFFANLILTM 253 Query: 367 FYFAI 371 Y I Sbjct: 254 VYLQI 258 >gi|329114428|ref|ZP_08243190.1| Putative ABC transporter permease protein [Acetobacter pomorum DM001] gi|326696504|gb|EGE48183.1| Putative ABC transporter permease protein [Acetobacter pomorum DM001] Length = 321 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 63/271 (23%), Positives = 128/271 (47%), Gaps = 7/271 (2%) Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 +S + +L +G+ + I + + A S + + FL + + Sbjct: 57 QSTLMDMVLDLVARLGRATLSLIRAAGALAL---FAASGLSHIVRPPFYGRVFLSTFLE- 112 Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219 G +PVV L + +G VIA Q +Q+ A+ ++ + RE+G +L +M Sbjct: 113 ---TGFFSLPVVALTALFSGGVIALQSYTGFAQYHAQSAIAGIVVLAVTRELGPVLAGLM 169 Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279 +AGR G+A+ A+IG+M++ ++IDA+ T+ + ++ L++PR+ A +I+LPLL ++A+ + Sbjct: 170 VAGRVGAAMAAQIGTMRVTDQIDALTTLSTNPMKYLVAPRLLAGLIALPLLVLVADILGV 229 Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339 G V + + ++ ++ GL+KA I ++ G+ + Sbjct: 230 AGGFTVAVVKLGFSAPAYITATLNSLKAIDVTVGLVKAALFGFLIALMGCYYGYNSKGGA 289 Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +G T VV + +++ D L +F+ Sbjct: 290 EGVGSATTAAVVAASIMLLAFDYLLTDLFFS 320 >gi|11465859|ref|NP_054003.1| hypothetical protein PopuCp208 [Porphyra purpurea] gi|1723414|sp|P51393|YCF63_PORPU RecName: Full=Probable ABC transporter permease protein ycf63 gi|1276859|gb|AAC08279.1| ORF263 [Porphyra purpurea] Length = 263 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 62/250 (24%), Positives = 113/250 (45%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 F + L +S A K SL Q+Y VG + + +L + Sbjct: 2 FQFELKKWIQKLNSTLSLFVSLLARLRTMKINTSSLAEQIYLVGPGSLNITLLTACFISM 61 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V Q A + A ++ I RE+ +LTAV+IAG+ GS+ AEI +M+ E+ Sbjct: 62 VFTMQIAKEFLHLDAASALGAVIVIAFTRELSPVLTAVIIAGKIGSSFTAEIATMETTEQ 121 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ + + + L+ P++ A I LP+L+ ++ ++I + V + Y IP ++F Sbjct: 122 IDALYLLNTNPIDYLVFPKVAACCIMLPILSTISLTASIAISIFVSFVMYGIPSSIFLKS 181 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 ++++ F+ L K+ I ++ + G + +G T+ VV + + I Sbjct: 182 AFLALSVSDFFSCLQKSLCFGTIIAFISCQWGLTSSGGAKGVGNSTTSSVVTILLTIFIT 241 Query: 361 DSLFAIFYFA 370 D + + F F Sbjct: 242 DFILSYFMFQ 251 >gi|282891606|ref|ZP_06300097.1| hypothetical protein pah_c180o100 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498574|gb|EFB40902.1| hypothetical protein pah_c180o100 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 262 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 73/244 (29%), Positives = 123/244 (50%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N LG + + K + QM+ +GV +PVV + F TG V+ Sbjct: 2 NTMTKMLATLGDYFLLILKVIWVTIKRPPAWSLIRDQMFEIGVMSLPVVAITGFSTGLVL 61 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A Q FQLS G + +++ + E+G +LTA M+ GR G+++ AE+G+M++ E+ID Sbjct: 62 AAQSFFQLSDKGLASATGLMVTKAMMVELGPILTAFMVTGRVGASMCAELGTMRVTEQID 121 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R+M ++ +R LI+PR A LPLLTI + I+G ++ YY +P + F Sbjct: 122 ALRSMSVNPLRYLIAPRFIAGTTMLPLLTIFSCLMGILGGYLLSVYYYQMPPSTFLDPLP 181 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 ++ +GLIKA I ++ G + + +G+ T VV S+++I + Sbjct: 182 LHIKTFDMVSGLIKAFIFGIIIITISCYRGLSTRGGAAGVGRATTNSVVICYSVILISNF 241 Query: 363 LFAI 366 + I Sbjct: 242 IITI 245 >gi|83945272|ref|ZP_00957621.1| ABC transporter, permease protein, putative [Oceanicaulis alexandrii HTCC2633] gi|83851442|gb|EAP89298.1| ABC transporter, permease protein, putative [Oceanicaulis alexandrii HTCC2633] Length = 255 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 68/249 (27%), Positives = 122/249 (48%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + G V G+ A+ + F L++Q++ +G +PVV L + TG Sbjct: 6 AIGAGLLALLRSAGAVALFAGQALAALVRPPYFGGQLVQQIFKIGFLSLPVVGLTALFTG 65 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 A +A S+F AE F +++++ +RE+G ++ A+M+AGR S I AEIG+M+ E Sbjct: 66 AALALNIYTGGSRFNAESFVPNIVAMGIVRELGPVIAALMLAGRVSSGIAAEIGAMRATE 125 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +IDA+ T+ D +R LI+PR+ A ++ LP+L A+ I G +V D ++ Sbjct: 126 QIDALHTLATDPMRYLIAPRVLAGVLVLPILVATADIIGIYGGYLVSVHTLDFNPTIYVR 185 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 + +I +GLIKA + ++ G+ + +G+ T VV + ++ Sbjct: 186 NTWDFLSDWDIISGLIKAAVFGFILTLMGCYHGYYAQGGAQGVGRAATNAVVAAAVLIFA 245 Query: 360 IDSLFAIFY 368 + L + Sbjct: 246 ANFLLTSLF 254 >gi|182412508|ref|YP_001817574.1| hypothetical protein Oter_0685 [Opitutus terrae PB90-1] gi|177839722|gb|ACB73974.1| protein of unknown function DUF140 [Opitutus terrae PB90-1] Length = 250 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 63/245 (25%), Positives = 120/245 (48%), Gaps = 2/245 (0%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + +G + + LI Q + +G + +P+V ++SF G+V+ Sbjct: 2 KQFHAIFEGIGSTVLLLVRSLSFIGTLPRQRARLIEQCFTIGYTTLPIVAILSFFIGSVL 61 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A Q + + GA+ + L+ + RE+G ++ A+++AGR GS+I AE+ SMK+ +E+D Sbjct: 62 ALQAGYAMQNVGAKQYIGSLVGLSMARELGPVMVAILLAGRVGSSIAAELASMKVYQEVD 121 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI--WKYYDIPFAVFFSR 300 A+ TM + R+L+ PR+ A++ +P+L ++AN G +IV + I +F+ Sbjct: 122 ALVTMNIPPERMLVLPRLIAVLFMMPVLVMIANLVGWFGGAIVAKYTTFISIDPPAYFAV 181 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 ++ GLIKA + +V G +G VT VV S+ +++++ Sbjct: 182 LRRYTEFKDVLNGLIKAEVFGFGVVLVCCNIGLNTRGGPREIGAAVTQAVVTSLILILVL 241 Query: 361 DSLFA 365 + Sbjct: 242 NYFVT 246 >gi|239904657|ref|YP_002951395.1| putative ABC transporter permease protein [Desulfovibrio magneticus RS-1] gi|239794520|dbj|BAH73509.1| putative ABC transporter permease protein [Desulfovibrio magneticus RS-1] Length = 256 Score = 207 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 70/246 (28%), Positives = 128/246 (52%), Gaps = 1/246 (0%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLL-SLIRQMYYVGVSGVPVVILISFVTGAV 181 +D + ++ G K +L I + +VG + +V +I+ G + Sbjct: 6 DDLGVLVGLAVDLMRCAGRALRPWRPEKPYLRARTISHLAWVGADSLAIVSVIAACVGII 65 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 ++ Q A QL + GA + +L+ + E+G LLT ++++GR+G+A AEI +M+I+EEI Sbjct: 66 LSLQAAIQLEKVGAMSYVANLVGFSLVTELGPLLTCLILSGRAGAAFTAEIATMRISEEI 125 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ MG+D VR L+ P+ A+ + PLLT+ A+ I I + V+F++ Sbjct: 126 DALAVMGIDPVRFLVWPKFVAMAVMAPLLTLWADAVGITAGGIFSSLALGLSGKVYFNQI 185 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 ++ +GL+K+ AI +++ +GF + +G++ T VVQSI ++I++D Sbjct: 186 AYFLGFKDLLSGLVKSAGFGVAITVISCWQGFLAREGAADVGRRTTAAVVQSIFVMILLD 245 Query: 362 SLFAIF 367 F Sbjct: 246 LFFTAL 251 >gi|149918249|ref|ZP_01906741.1| putative ABC transporter, permease protein [Plesiocystis pacifica SIR-1] gi|149821009|gb|EDM80416.1| putative ABC transporter, permease protein [Plesiocystis pacifica SIR-1] Length = 273 Score = 207 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 64/275 (23%), Positives = 121/275 (44%), Gaps = 7/275 (2%) Query: 94 KNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFL 153 + ++ +G I + I A + G + A + L Sbjct: 3 DPKSDAPPAKKPGIRDWAEGVGANINETIRWCGGMAVMFGQAM-------ARGPRRPWGL 55 Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 + Q+ +G+ +PV ++S G ++A Q L+ FGA + S+ +RE+ Sbjct: 56 FDISYQILQLGIRSIPVTTMMSIFVGMILAWQFGEALADFGATNSIGYVTSLALVRELVP 115 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 L AV + + + + AE+GSMK+ E+IDAI +G D ++ L+ PR+ A +++PLL Sbjct: 116 TLLAVTVGTKMATGMTAELGSMKVTEQIDAIAALGADPIKKLVWPRLVAACVAMPLLVAW 175 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 N A++G ++ +DIP F++ + + KA GI+ +GF Sbjct: 176 GNVIAMLGGMLISEAVFDIPAGYFYNSYIDELEPIHYVMSQTKALVFGALAGIIGCYQGF 235 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + + ++G+ T V+ +V+I D + Sbjct: 236 STKFGTEAVGQSTTETVIAVSVLVLIADFALTALF 270 >gi|170078977|ref|YP_001735615.1| ABC-type toluene export system, permease component [Synechococcus sp. PCC 7002] gi|169886646|gb|ACB00360.1| ABC-type toluene export system, permease component [Synechococcus sp. PCC 7002] Length = 259 Score = 207 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 63/219 (28%), Positives = 107/219 (48%) Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198 G+ + K + QM G + V+L++F G + Q A +L+ FGAE F Sbjct: 23 LGQVLWRLLRGKLRRDQITEQMLTAGPKALVPVLLVAFFGGMIFTIQTARELTTFGAESF 82 Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258 +I RE+ +LTA +IAG+ GSA AE+GSMKI E+IDA+ + + V L+ P Sbjct: 83 VGGAFAIAFCRELAPILTASIIAGQVGSAFAAELGSMKITEQIDALYMLRSNPVDYLVMP 142 Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318 R+ A + LP+LT+ A +IG + +++YD+ F + + ++ +K Sbjct: 143 RVVACCLMLPILTVFALVVGVIGGTGAAYQFYDLAPINFLTSVQTFLQPRDLINVGVKGI 202 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 +GI+ G + +G+ T+ VV + + Sbjct: 203 LFGLLVGIIGCSWGLTTVGSTQQVGRSATSAVVTTWIGI 241 >gi|281421763|ref|ZP_06252762.1| ABC transporter, permease [Prevotella copri DSM 18205] gi|281404258|gb|EFB34938.1| ABC transporter, permease [Prevotella copri DSM 18205] Length = 248 Score = 207 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 109/241 (45%), Gaps = 1/241 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 G + G + + + FL I++M +G+ + +V+LISF GAVI Q Sbjct: 7 LTTFGKYLILMGRSFSRPERMRMFLKQYIKEMSQLGIDSIGIVLLISFFIGAVICIQMKL 66 Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + + + L E + +++AG+ GS I +E+G+M++ ++IDA+ M Sbjct: 67 NIQSPWMPRWVSGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALDIM 126 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ LI P+I L+ +P L I ++ IIGA + + +P + Sbjct: 127 GVNSACYLILPKILGLVTIMPFLVIFSSGMGIIGAYGTAYIGHILPPDDLTLGLQHSFNQ 186 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ +IK+ F A I V+ G+ V S +GK T VV S +++ D Sbjct: 187 WFVWMSIIKSLFFAFIISSVSSYFGYTVEGGSVEVGKSSTDAVVCSSVLILFSDVFLTQI 246 Query: 368 Y 368 Sbjct: 247 L 247 >gi|218441471|ref|YP_002379800.1| hypothetical protein PCC7424_4570 [Cyanothece sp. PCC 7424] gi|218174199|gb|ACK72932.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7424] Length = 266 Score = 207 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 61/246 (24%), Positives = 110/246 (44%) Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 S + +G K + QM VG + + ++ + V G + Sbjct: 9 GFGSWIQRTWAAVLLSGRAIFFVSIGKIDRQLTLEQMMAVGPGSLVIALITAAVIGMIFT 68 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q A + GA ++++ RE+ ++TAV++AGR GSA AEIG+M++ E+IDA Sbjct: 69 IQVAREFLALGAGSAVGGILALSLARELSPIMTAVIVAGRVGSAFAAEIGTMQVTEQIDA 128 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + + D + L+ PR+ A + +PL+TI+A + G ++ YDI VF + Sbjct: 129 LYMLKTDPIEYLVVPRLVACCVMVPLMTIIALVIGLAGGLLIASSIYDISIEVFLDSIQT 188 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +++I +G IK I I+ G + +G+ T VV + + + + Sbjct: 189 FLKISDILSGPIKGIVFGALIAIIGCNWGLTTTGGAKGVGESTTAAVVTCLLAIFVSNFF 248 Query: 364 FAIFYF 369 + F Sbjct: 249 LSWIMF 254 >gi|159476846|ref|XP_001696522.1| lipid transfer machine permease [Chlamydomonas reinhardtii] gi|158282747|gb|EDP08499.1| lipid transfer machine permease [Chlamydomonas reinhardtii] Length = 245 Score = 207 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 55/231 (23%), Positives = 114/231 (49%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G+ +K + Q+ VG + + V +L + G V Q + ++ G Sbjct: 5 GQVVLRIFKGNIHWKNTAEQLRLVGPASLGVSLLTAGFVGMVFTIQFVREFAKLGLTRSV 64 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 ++++ RE+ ++TA+++AGR GSA AE+G+M+++E++D++R + D V L++PR Sbjct: 65 GGVLALALSRELTPVVTAIILAGRVGSAFAAELGTMQVSEQMDSLRVLYTDPVDYLVTPR 124 Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319 + A +I+ P+L +L + A + Y++P V T ++ T ++K+ Sbjct: 125 VLASMIAGPILNVLCFLMGMGAAVFLADIVYNVPANVIVDSARRALTSYDVMTSMVKSWV 184 Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + ++ GF + +G+ T+ VV S+ + I D ++ +F Sbjct: 185 FGTVVATISCAWGFTTSGGAKGVGESTTSAVVISLVTIFIADFFLSLVFFQ 235 >gi|288930100|ref|ZP_06423938.1| ABC transporter, permease [Prevotella sp. oral taxon 317 str. F0108] gi|288328573|gb|EFC67166.1| ABC transporter, permease [Prevotella sp. oral taxon 317 str. F0108] Length = 248 Score = 207 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 59/245 (24%), Positives = 109/245 (44%), Gaps = 1/245 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + LG + G + + + F +++M +GV V +V+LISF GAVI Sbjct: 3 ILNYLNTLGQYLILMGRSFSRPERMRMFFKRYVKEMSQLGVDSVGIVLLISFFIGAVICI 62 Query: 185 QGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + + + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 63 QMKLNIQSPWMPRWVSGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 122 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I L+ +P L I ++ I+GA + + + Sbjct: 123 LDIMGVNSASYLILPKILGLVTIMPFLVIFSSAMGILGAYATAYIGHILTPDDLTLGIQH 182 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 ++ ++K+ F A I V+ G+ V S +GK T VV S +++ D Sbjct: 183 AFKPWFMWMSIVKSLFFAYIIASVSSYFGYTVEGGSVEVGKASTDAVVSSSVLILFSDVF 242 Query: 364 FAIFY 368 Sbjct: 243 LTQML 247 >gi|222055035|ref|YP_002537397.1| protein of unknown function DUF140 [Geobacter sp. FRC-32] gi|221564324|gb|ACM20296.1| protein of unknown function DUF140 [Geobacter sp. FRC-32] Length = 257 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 62/246 (25%), Positives = 123/246 (50%), Gaps = 5/246 (2%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + + L G + ++ F Q+ +GV + +VIL TG V+ Sbjct: 12 SFVLEVQELFFLSTRAIGCIVTPPFYYRDFTT----QLDKIGVGSLFIVILTGLFTGMVM 67 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A Q QL F A + ++++ ++E+G +L+++M+AGR GSAI AE+G+M + E++D Sbjct: 68 ALQALIQLKPFAATSYVGGMVAVTMVKELGPVLSSLMVAGRVGSAITAELGTMVVTEQVD 127 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++ G D ++ L++ R+ A++I++PLL I+ + +++G I+ YDI +++ Sbjct: 128 AMQVEGTDIIKRLVTSRLKAIVIAMPLLAIITDAVSLVGGYIMAAN-YDINIIMYWKSIP 186 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 ++ G++K I +V G + + +G+ VV S +++ D Sbjct: 187 QFMVFQDLIEGVVKPAVFGFIIAMVGCHVGLSTNGGAAGVGESAKRAVVISSVSILVTDF 246 Query: 363 LFAIFY 368 A + Sbjct: 247 FIAKIF 252 >gi|116310403|emb|CAH67412.1| OSIGBa0143N19.6 [Oryza sativa Indica Group] Length = 345 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 49/236 (20%), Positives = 110/236 (46%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 + G+ + +L+ Q+ VG V +L + G Q + ++ G Sbjct: 99 ALLLAGQVFHRVLTGRVHRRNLLAQLRRVGPGSAGVSLLTAAFVGMAFTIQFVREFTRLG 158 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 ++++ RE+ ++TAV+ AGR GSA A++G+M+++E+ D +R +G V Sbjct: 159 LHRSVGGVLALALSRELSPVVTAVVAAGRVGSAFAAKLGTMQVSEQTDTLRVLGAQPVDY 218 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L+ PR+ A +++LP+LT+++ + ++ + + + ++ ++ + L Sbjct: 219 LVVPRVVACVLALPVLTLMSFALGLASSAFLADSIFGVSTSIILESARRALRPWDLISSL 278 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +K+ I +V+ G + +G+ T+ VV S+ + + D + +F Sbjct: 279 LKSQVFGAIIAVVSCAWGVTTHGGAKGVGESTTSAVVVSLVGIFVADFALSCLFFQ 334 >gi|78355070|ref|YP_386519.1| transporter [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217475|gb|ABB36824.1| transporter, putative [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 250 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 69/217 (31%), Positives = 125/217 (57%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 + Q+ G + +V +I+ TG ++A Q A QL + GA + +++S+ ++E+G LL Sbjct: 34 MWHQLAETGTRSLGIVSVIAACTGMILALQAAQQLEKVGALSYVANMVSVTIVKELGPLL 93 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA+++AGRSG+A AEI +M+I EEIDA+ +G+ VR L+ P++ A++I LP+LT+ A+ Sbjct: 94 TAIILAGRSGAAFCAEISTMQIYEEIDALEVIGISPVRYLVVPKLCAMLIMLPVLTLWAD 153 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 II + + F+ + ++ ++ + ++KA AI ++ +GF Sbjct: 154 LVGIISGGLFAALGLGLSFSGYLNQAVYFLGTGDVVSSVVKAAGFGTAITLICCWQGFMA 213 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 + +G++ T VVQSI +VI++D F + G Sbjct: 214 QGGAADVGRRTTKAVVQSIFMVILLDLFFTAINYLAG 250 >gi|260433527|ref|ZP_05787498.1| membrane protein [Silicibacter lacuscaerulensis ITI-1157] gi|260417355|gb|EEX10614.1| membrane protein [Silicibacter lacuscaerulensis ITI-1157] Length = 260 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 55/254 (21%), Positives = 112/254 (44%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + + G V + + ++ + L + +G +PVV L + Sbjct: 7 LAELGRAVLNLLAAFGRVTLFALDALSHIFRPPFYPRELGMALLNIGWLSLPVVGLTTIF 66 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG +A Q ++F AE +++I +RE+G ++ +MIA R S+I AEI +MK+ Sbjct: 67 TGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVMVGLMIAARVTSSIAAEIATMKV 126 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+ T+ ++ L +PR+ A +I++P L + + I G V + A + Sbjct: 127 TEQIDALVTLSTHPMKYLTAPRVLAALITVPALVAVGDIIGIAGGYAVATQNLGFNPAAY 186 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 +I + L+K I+ G G + +G+ + V + ++ Sbjct: 187 LKNTVDFLEPLDILSSLVKGAAFGMIAAIMGCYFGMNSGRGAQGVGRATKSSVEAAAVLI 246 Query: 358 IIIDSLFAIFYFAI 371 + + + +F++ Sbjct: 247 LAANFVLTGVFFSL 260 >gi|212702437|ref|ZP_03310565.1| hypothetical protein DESPIG_00454 [Desulfovibrio piger ATCC 29098] gi|212674098|gb|EEB34581.1| hypothetical protein DESPIG_00454 [Desulfovibrio piger ATCC 29098] Length = 375 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 77/354 (21%), Positives = 150/354 (42%), Gaps = 11/354 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G+W + + + +++ D+ ++ + Sbjct: 13 GERLQVTVSGSWAINTPWPPQCADALQQLQGPGIRQLHLAAASLDAWDSSLLVFLVQLHK 72 Query: 64 KY-HGKIKL-QGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 +I++ Q + + +L L + + R + L +G ++ Sbjct: 73 AASAARIEISQDLPAGLARLLHLAFAIPAQAGAARSDHR-------QGLFARVGGAVMSL 125 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 LG V + + + + MY GV +P++ + S + G + Sbjct: 126 PPRCADFLEFLGDVTLSIWRLILGRAGMR--MQDFVEAMYECGVRALPIISITSLLFGLI 183 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A GA QL+QFGA+I+ L+ I LR +G ++ V+++GR G+A A IG+M++NEE+ Sbjct: 184 LAFVGAVQLTQFGAQIYVAGLVGIGMLRVMGAVMVGVVMSGRVGAAYAAMIGTMQVNEEV 243 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ T+G+ + L+ PR+ AL+ +PLLT+ A+ I+G +V + A + + Sbjct: 244 DALTTLGISPIDFLVLPRMLALMFMVPLLTVYADLMGILGGYVVGVSMLGLSSAEYLNAT 303 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + + G+ I + +G G + ++G TT VVQSI Sbjct: 304 MQMVSFVHGLIGIAYGTVFGVIIALAGCYQGIRCGRSAQAVGLATTTAVVQSIV 357 >gi|24214757|ref|NP_712238.1| ABC transporter membrane protein [Leptospira interrogans serovar Lai str. 56601] gi|45657720|ref|YP_001806.1| ABC transporter permease protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24195758|gb|AAN49256.1| membrane protein of an ABC transporter complex [Leptospira interrogans serovar Lai str. 56601] gi|45600960|gb|AAS70443.1| ABC transporter permease protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 259 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 4/241 (1%) Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G I E + ++ QMY GV + VV +++ TG +++ L Sbjct: 17 GFTILLVYESILNLPYSFFKRKEILDQMYITGVGSISVVSIVAVFTGMIMSLNTGLGLKD 76 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 FGAE LM+I RE+ +TA+++A GSA+ AEIG+MK++EE+DA+ M +D V Sbjct: 77 FGAEGQIGLLMTITLTREMSPFMTALILAASIGSAMAAEIGTMKVSEEVDALEVMSIDPV 136 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA----TLA 308 R LI PRI + +P+L + + I+G +IV + I + +F L Sbjct: 137 RYLIFPRILGFSVMVPVLCVYSTALGILGGAIVGYFQLGIDYFTYFRDVFDRIASIPGLK 196 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 +++ G++K + ++ G + +G+ VV S +VI + + Sbjct: 197 DLYVGILKGFIFGIIVSAISCSHGLRTSGGAIGVGRATRESVVASFLMVIFTGYMITALF 256 Query: 369 F 369 + Sbjct: 257 Y 257 >gi|319945411|ref|ZP_08019671.1| tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Lautropia mirabilis ATCC 51599] gi|319741197|gb|EFV93624.1| tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Lautropia mirabilis ATCC 51599] Length = 260 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 68/265 (25%), Positives = 128/265 (48%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + +G+ IND L ++ + + Q+Y+VG Sbjct: 1 MIGMLARLGRWARHVINDLGFAGRFLMQLLWASLLSLKRP-------RLISEQVYFVGNR 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++++ G V+ QG + L ++GAE L+++ LRE+G +++A++ AGR+ + Sbjct: 54 SLSIILISGLFVGFVLGLQGYYNLERYGAESSLGLLVALSLLRELGPVVSALLFAGRACT 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 +I A IG MK E++ A+ MG+D ++ +++PR A++I+LPLL +L + I+GA +V Sbjct: 114 SITAGIGLMKSGEQLIAMEMMGVDPMKRVLAPRFMAVMIALPLLALLFSAVGIVGAWVVG 173 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + + F+S+ + ++ G+IK+ A G +A+ G + + Sbjct: 174 VQMIGVDPGSFWSQMQGGVSFRADVLNGVIKSFVFALLCGFIALVVGHESDATPEGVARA 233 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 TT VV S V+ D L F Sbjct: 234 TTTTVVISSLAVLASDVLMTALMFG 258 >gi|90994584|ref|YP_537074.1| hypothetical protein 26 [Porphyra yezoensis] gi|122194637|sp|Q1XD94|YCF63_PORYE RecName: Full=Probable ABC transporter permease protein ycf63 gi|90819148|dbj|BAE92517.1| unnamed protein product [Porphyra yezoensis] Length = 263 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 62/236 (26%), Positives = 113/236 (47%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 I K +L+ Q+Y VG + + +L + V Q A + Sbjct: 16 TIRLFFRLLIRLKTIKVNTNNLVEQIYIVGPGSLNITLLTACFISMVFTMQIAKEFLYLD 75 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 A ++ I RE+ +LTAV+IAG+ GS+ AEI +M+ E+IDA+ + + + Sbjct: 76 AASAIGAVIVIAFTRELSPVLTAVIIAGKIGSSFTAEIATMETTEQIDALYLLNTNPIDY 135 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L+ P++ + + LP+L+I++ ++I + V + YDIP +VF + ++++ L Sbjct: 136 LVFPKVASCFLMLPILSIISLTASIAISLFVAFVMYDIPSSVFLKSAFNALSISDFLICL 195 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 K+ F A IG ++ + G + +G T+ VV + V I D + + F F Sbjct: 196 EKSMFFAIIIGFISCQWGLTSNGGAKGVGNSTTSSVVTILFTVFITDFVLSYFMFQ 251 >gi|296122312|ref|YP_003630090.1| hypothetical protein Plim_2064 [Planctomyces limnophilus DSM 3776] gi|296014652|gb|ADG67891.1| protein of unknown function DUF140 [Planctomyces limnophilus DSM 3776] Length = 260 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 68/247 (27%), Positives = 123/247 (49%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + +G T + L Y +G +PV+++ G V+A Sbjct: 2 LLTSVRTVGDAAIFTSTVALGLATRRSRSAILWPIFYEIGCRSMPVILITGGFIGMVLAV 61 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q QL+ G + ++++ ++E+G +L A M+AGR GSA+ AEIG+MK+ E+IDA+ Sbjct: 62 QSFDQLAAIGLQSRLGSVVNVSLVKELGPVLAATMLAGRVGSAMAAEIGTMKVTEQIDAL 121 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 + +G + V L+ PR A ++ +P LT+LA+ ++ + + I +++ S Sbjct: 122 QALGANPVMFLVCPRFLACVLLIPALTLLADGIGMLSGWYLSVQVLGISSHLYWFYSDSY 181 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 T +I +G+IK+ F AI +VA GF + +G+ T V S +V+ +D L Sbjct: 182 ITSLDIISGVIKSIFFGGAIALVACHRGFHCSSGAEGVGRAATEAFVCSFILVLAMDFLL 241 Query: 365 AIFYFAI 371 +F+ + Sbjct: 242 GVFFIQL 248 >gi|254476887|ref|ZP_05090273.1| membrane protein [Ruegeria sp. R11] gi|214031130|gb|EEB71965.1| membrane protein [Ruegeria sp. R11] Length = 266 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 113/254 (44%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + +G V + + + ++ + VG +PVV L + Sbjct: 13 LARLGQMVLGALGAVGRVAIFGLSTFSHMVRPPYYPREVLNALLQVGWLSLPVVGLTAIF 72 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG +A Q ++F AE +++I +RE+G +L +MIA R S+I AEI +MK+ Sbjct: 73 TGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKV 132 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+ T+ ++ L++PR+ A ++++P+L + + I+G +V + A + Sbjct: 133 TEQIDALVTLSTHPMKYLVAPRVLAALLTVPVLVGVGDIIGIMGGYVVATQNLGFNPAAY 192 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 +I + L+K + G G + +G+ V + ++ Sbjct: 193 LKNTVDFLEARDIISSLVKGAAFGTIAATMGCYYGMQSGRGAQGVGRATKGSVEAAAVLI 252 Query: 358 IIIDSLFAIFYFAI 371 + + + +F++ Sbjct: 253 LAANFVLTGVFFSL 266 >gi|33240854|ref|NP_875796.1| putative transporter, membrane component [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33238383|gb|AAQ00449.1| ABC-type transport system involved in resistance to organic solvents permease component [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 248 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 67/239 (28%), Positives = 112/239 (46%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG G+ S+ K + LI Q+ G + +V++ G V Q A +LS Sbjct: 10 LGSSCIIGGQAVTSTTKGRFNKADLIDQLMEAGPASFLIVLITGVSAGTVFNIQVAAELS 69 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + G L++I REI LLTA ++ G+ +A A++G+MK+ E+IDAI + D Sbjct: 70 RQGLGSEVGGLLAIGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLKTDP 129 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A+++ PL +L A+ + +Y IP VF++ L ++ Sbjct: 130 VEYLVVPRLIAMVVMAPLQCLLFFSVALWSGQVSSTAFYSIPPNVFWNSVKEWIVLTDLP 189 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 LIKA I ++A G + +G T VV ++ V ++D + F+ Sbjct: 190 FMLIKAVVFGLQIAVIACGWGLTTRGGAKEVGTSTTGAVVMTLLTVSLMDVVLTKVLFS 248 >gi|255530709|ref|YP_003091081.1| hypothetical protein Phep_0797 [Pedobacter heparinus DSM 2366] gi|255343693|gb|ACU03019.1| protein of unknown function DUF140 [Pedobacter heparinus DSM 2366] Length = 269 Score = 206 bits (525), Expect = 5e-51, Method: Composition-based stats. Identities = 65/247 (26%), Positives = 113/247 (45%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 L V F + L RQ Y +G ++ F+TG V + Sbjct: 21 LARMFLTLYDVYKFIARFFKEGFLPPYEARELFRQCYEIGYRSALLISTTGFITGIVFTK 80 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q LS+FGA + L+ I LR + LLT ++ AG+ GS+I AE+GSM++ E+IDA+ Sbjct: 81 QSRPSLSEFGATSWLPSLVGIALLRTLAPLLTGLIAAGKVGSSIGAELGSMRVTEQIDAM 140 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 + + L+S R+ A I++P+LT ++GA + + FF Sbjct: 141 EVSATNPFKFLVSTRVLAATITIPILTFYTAMVGMLGALLNVSLSEGTSARAFFQSSLEQ 200 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 T +I +KA IG+V +G+ + +GK + VV ++ ++ I + + Sbjct: 201 ITFLDITASTVKAILFGFTIGMVGCYQGYNSSKGTEGVGKAANSAVVIAMFLIFI-EEVV 259 Query: 365 AIFYFAI 371 ++ +F + Sbjct: 260 SVQFFGL 266 >gi|259416059|ref|ZP_05739979.1| membrane protein [Silicibacter sp. TrichCH4B] gi|259347498|gb|EEW59275.1| membrane protein [Silicibacter sp. TrichCH4B] Length = 260 Score = 206 bits (525), Expect = 5e-51, Method: Composition-based stats. Identities = 58/250 (23%), Positives = 115/250 (46%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 S + LG + + + + + VG +PVV L + TG Sbjct: 11 GRTSLGRLAALGRITRFAASTFSHMLRPPFYPREFANALLQVGWLSLPVVALTAIFTGGA 70 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A Q ++F AE +++I +RE+G +L +MIA R S+I AEI +MK+ E+I Sbjct: 71 LALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQI 130 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ T+ + ++ L++PR+ A +I++P+L + + I+G +V + D A + Sbjct: 131 DALVTLSTNPMKYLVAPRVLAALITVPVLVGVGDIIGIMGGYVVATETLDFNAAAYLKNT 190 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 L +I + L+K ++ G G + +G+ V + +++ + Sbjct: 191 VDFLELRDIVSSLVKGAAFGTIAALMGCYYGMQSGRGAQGVGRATKGSVEAAAVLILAAN 250 Query: 362 SLFAIFYFAI 371 + +F++ Sbjct: 251 FVLTGVFFSL 260 >gi|297190651|ref|ZP_06908049.1| ABC-transporter integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] gi|197719878|gb|EDY63786.1| ABC-transporter integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] Length = 281 Score = 206 bits (525), Expect = 5e-51, Method: Composition-based stats. Identities = 64/273 (23%), Positives = 112/273 (41%) Query: 99 QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158 G V+ + + G + + E + ++ L I Sbjct: 3 APPPVRPPALADDRPAGVPAVRGPSKLLAPLRETGKLFALAAEVTRAIFRRPFQLREFIE 62 Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 Q ++V + L+S GAVIA Q Q GA+ F+ + +++ L+ A+ Sbjct: 63 QFWFVASVTILPAALVSIPFGAVIALQVGSLTQQLGAQSFTGGASVLAVIQQASPLIVAL 122 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 +IAG GSAI A++GS KI EE+DA+ MG+ V+ L+ PR+ A ++ LL + + Sbjct: 123 LIAGAGGSAICADLGSRKIREELDAMEVMGVSPVQRLVVPRVLATMLVAVLLNGMVSVVG 182 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 +G + + F + A L +++ +KA GIVA G Sbjct: 183 TLGGYFFNVIMQGGTPGAYLASFSALAQLPDLYVSELKALIFGFIAGIVAAYRGLGPRGG 242 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +G V VV + ++ ++ + Y I Sbjct: 243 PKGVGDAVNQSVVITFMLLFFVNMVLTAIYLQI 275 >gi|159903919|ref|YP_001551263.1| putative transporter, membrane component [Prochlorococcus marinus str. MIT 9211] gi|159889095|gb|ABX09309.1| possible transporter, membrane component [Prochlorococcus marinus str. MIT 9211] Length = 248 Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats. Identities = 70/239 (29%), Positives = 113/239 (47%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + G+ SS K LI Q+ G + +V++ G V Q A +LS Sbjct: 10 LGSSMLIGGQAITSSTKGNINKSDLIDQLMEAGPASFIIVLITGISAGTVFNIQVAAELS 69 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + G L++I REI LLTA ++ G+ +A A++G+MK+ E+IDAI + D Sbjct: 70 RQGVGSEVGGLLAIGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLQTDP 129 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 + L+ PR+ A++I PL +L A+ I +Y IP VF++ + +++I Sbjct: 130 IDYLVVPRVIAMVIMAPLQCLLFFTVALWSGQISSTYFYSIPINVFWNSVNEWLVISDIP 189 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 LIKA I ++A G + +G T VV ++ V ++D L F Sbjct: 190 FMLIKAVVFGFQIAVIACGWGLTTRGGAKEVGTSTTGAVVMTLLSVSLMDVLLTKVLFG 248 >gi|87303089|ref|ZP_01085887.1| possible transporter, membrane component [Synechococcus sp. WH 5701] gi|87282256|gb|EAQ74216.1| possible transporter, membrane component [Synechococcus sp. WH 5701] Length = 249 Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats. Identities = 64/242 (26%), Positives = 112/242 (46%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 H LG + G+ ++ K + L L QM G +VI+ + G V Q A Sbjct: 7 IHRLGSSVMIGGQSISALAKGRINLNDLFEQMLEAGPGSFLIVIITALAAGTVFNIQVAA 66 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 +L++ GA ++++ REI LLTA ++ G+ +A A++G+MK+ E+IDAI + Sbjct: 67 ELTRQGAGFSVGGILALGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLR 126 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 D V L+ PR+ A+++ P+ +L I + Y IP VF++ + + Sbjct: 127 TDPVEYLVVPRVLAMVVMAPVQCLLFFVVGIWSGQVSSTFLYSIPPTVFWNSVRTWMEPS 186 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 ++ + L+KA I ++A G +G T VV + V ++D + Sbjct: 187 DLPSMLVKALVFGLQIAVIACGWGLTTRGGPKEVGTSTTGAVVMILVTVSLVDVVLTQVL 246 Query: 369 FA 370 F Sbjct: 247 FG 248 >gi|294816012|ref|ZP_06774655.1| Putative YrbE family protein [Streptomyces clavuligerus ATCC 27064] gi|326444354|ref|ZP_08219088.1| putative YrbE family protein [Streptomyces clavuligerus ATCC 27064] gi|294328611|gb|EFG10254.1| Putative YrbE family protein [Streptomyces clavuligerus ATCC 27064] Length = 293 Score = 206 bits (524), Expect = 6e-51, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 110/247 (44%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + H G + T E S ++ L I Q ++V + L+S GAVIA Sbjct: 41 ALAPLHETGRFFALTAEIVRSVFRRPFQLREFIEQFWFVASVTILPAALVSIPFGAVIAL 100 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q GA+ F+ + +++ L+ A++IAG GSAI A++GS KI EE+DA+ Sbjct: 101 QVGSLTQQLGAQSFTGGASVLAVIQQASPLIVALLIAGAGGSAICADLGSRKIREELDAM 160 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ ++ L+ PR+ A ++ LL + + +G D + + F + Sbjct: 161 EVMGVSPIQRLVVPRVLATMLVAFLLNGMISVVGTLGGYFFNVIMQDGTPGAYLASFSAL 220 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A L +++ KA G+VA G +G V VV + ++ ++ + Sbjct: 221 AQLPDLYISEFKALVFGFIAGVVAAHRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMII 280 Query: 365 AIFYFAI 371 Y + Sbjct: 281 TAIYLQV 287 >gi|255533344|ref|YP_003093716.1| hypothetical protein Phep_3461 [Pedobacter heparinus DSM 2366] gi|255346328|gb|ACU05654.1| protein of unknown function DUF140 [Pedobacter heparinus DSM 2366] Length = 244 Score = 206 bits (524), Expect = 6e-51, Method: Composition-based stats. Identities = 69/239 (28%), Positives = 115/239 (48%), Gaps = 1/239 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL- 190 G + KFK +L ++ +QM ++GV + ++ +IS GAV+ Q AFQL Sbjct: 6 FGRYLLLLKAVFRRPEKFKIYLKAIFKQMDFIGVGSLGLIAIISTFIGAVMTLQIAFQLV 65 Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 S F + + + E+ ++A+++AG+ GSAI +EIG+M+++E+IDA+ MG++ Sbjct: 66 SDFIPKTIIGSVNRDSSILELSPTISAIVLAGKIGSAISSEIGTMRVSEQIDALEIMGIN 125 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 LI P+I A I +PLL I++ F +I G I + A + + I Sbjct: 126 SPGYLILPKIIAGITMVPLLVIMSMFLSITGGYIGGTLSGAVSPAEYIQGITTDFNPYTI 185 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 L+KA I V EGF V + + + T VV S ++ D + Sbjct: 186 TVALVKAFVFGFIITSVPAYEGFYVKGGALEVAQASTRAVVVSCISILACDYIVTQLLL 244 >gi|33865118|ref|NP_896677.1| transporter, membrane component [Synechococcus sp. WH 8102] gi|33638802|emb|CAE07097.1| possible transporter, membrane component [Synechococcus sp. WH 8102] Length = 249 Score = 206 bits (524), Expect = 6e-51, Method: Composition-based stats. Identities = 64/239 (26%), Positives = 115/239 (48%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + G+ ++ + + + L Q+ G + +V++IS G+V Q A +L+ Sbjct: 10 LGASLLIGGQAVTATLRGRINTVDLQDQLMEAGPGTLLIVLIISIAAGSVFNIQVAAELT 69 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + GA +++I REI LLT+ ++AG+ +A A++G+MK+ E+IDAI + D Sbjct: 70 RQGAGSTVGGILAIGLAREIAPLLTSCLLAGKVATAYAAQLGTMKVTEQIDAITMLRTDP 129 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A+++ P+ A+ I Y+IP AVF++ + ++ Sbjct: 130 VEYLVVPRMIAMVVMAPVQCFFFFLMAVWSGQITSTALYNIPPAVFWTSVRTWMDPTDLP 189 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 L+KA I ++A G +G T VV + +V I+D + F Sbjct: 190 FMLVKALVFGLIIAVIACGWGLTTKGGPKEVGTSTTGAVVMILILVAIMDVVLTQVLFG 248 >gi|166365969|ref|YP_001658242.1| hypothetical protein MAE_32280 [Microcystis aeruginosa NIES-843] gi|166088342|dbj|BAG03050.1| hypothetical protein MAE_32280 [Microcystis aeruginosa NIES-843] Length = 268 Score = 205 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 58/250 (23%), Positives = 108/250 (43%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 F + S L + TG + + QM G + + + ++ + V G Sbjct: 8 FSKELSSWFRRCWLAVLLTGRVFYFLFTRQPDWRVTQEQMVAAGPASLIIAMITAAVIGM 67 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 + Q A + GA ++++ RE+ ++ A+++AGR GSA AEIG+MK+ E+ Sbjct: 68 IFTIQVAREFQALGAGSMVGGILALALGRELCPIMMAIVVAGRVGSAFAAEIGTMKVTEQ 127 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ + D V L+ PR+ A + +P L+++A + +V Y I +VF Sbjct: 128 IDALYMLKTDPVEYLVLPRLIACCLMVPALSVMALLIGLGSGLLVGQSLYGIANSVFLDS 187 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + ++ +G +K I I+ G + +G+ T VV + + + Sbjct: 188 VRGFLGVGDVLSGPVKGVVFGALIAIIGCNWGLTTDGGAKGVGQATTAAVVTMLLAIFVS 247 Query: 361 DSLFAIFYFA 370 + L F Sbjct: 248 NLLMTWILFQ 257 >gi|237708018|ref|ZP_04538499.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|237725290|ref|ZP_04555771.1| conserved hypothetical protein [Bacteroides sp. D4] gi|265754195|ref|ZP_06089384.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|229436556|gb|EEO46633.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] gi|229458004|gb|EEO63725.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|263234904|gb|EEZ20459.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 251 Score = 205 bits (523), Expect = 7e-51, Method: Composition-based stats. Identities = 67/243 (27%), Positives = 112/243 (46%), Gaps = 1/243 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G I G A + + F + +M +GV+ + +V+LISF GAVI Q Sbjct: 9 ITTVGKYIMLMGRTFARPERMRMFFKQYLNEMVQLGVNSIGIVLLISFFIGAVITIQIKL 68 Query: 189 QLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + F + + + L E + +++AG+ GS I +EIG+M++ ++IDA+ M Sbjct: 69 NIESPWMPRFVVGYTTREIMLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALEIM 128 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ LI P+I AL+ +P L I + FS IIGA W + + Sbjct: 129 GVNSAGYLILPKIIALMTMIPFLVIFSIFSGIIGAFCTCWFGGVMNAEDLAYGLQYSFQE 188 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ IK+ F A I V+ G+ V S ++GK T VV S +++ D + Sbjct: 189 WFVWCSFIKSIFFAFIISSVSAYFGYTVEGGSIAVGKASTDSVVMSSVLILFSDLVLTQL 248 Query: 368 YFA 370 Sbjct: 249 LMG 251 >gi|209543397|ref|YP_002275626.1| hypothetical protein Gdia_1228 [Gluconacetobacter diazotrophicus PAl 5] gi|209531074|gb|ACI51011.1| protein of unknown function DUF140 [Gluconacetobacter diazotrophicus PAl 5] Length = 383 Score = 205 bits (523), Expect = 7e-51, Method: Composition-based stats. Identities = 84/377 (22%), Positives = 157/377 (41%), Gaps = 17/377 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVV----MAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 +G TV +GNW + + + ++ A+ DT + Sbjct: 17 DGATVIVLSGNWLAQGGQGPGGPIPTFPPDGLRQAAPGRPLTFRSDALGRWDTGLIAFLW 76 Query: 60 YFMEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116 ++ H ++ + +L L+ P +G Sbjct: 77 DLKQRATQAHLDLRTDTLPDSARKLLDLL--------PEAPPPPPTPRPRTFAPVTALGA 128 Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 ++ + + + + E + + + L+ + G S + +V +++F Sbjct: 129 FTIESLTEIGTVTELGVETARGGLEAVTGRGRMRS--IDLMSNIRDAGPSALLIVSVVNF 186 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 + GA++A GA QL +F A+I+ L+ I +RE+ ++TA+++AGR+G A A I +M+ Sbjct: 187 LVGAILAFVGAVQLRKFAADIYVASLVGIAMVREMSAVMTAIIMAGRTGGAYAARIATMQ 246 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 NEEIDA+ G+ LI P I L+ ++P L + ++G V + A Sbjct: 247 GNEEIDALTVFGIPVSSYLILPSILGLVATMPFLYLYGCLIGMLGGFTVAISMLAVTGAG 306 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +F + + L G IK+ F A IG+ + + G G + +G T VV I Sbjct: 307 YFHQTINAVGLNQFEFGFIKSIFFAILIGLTSCRIGLRSGRSAADVGVAATRAVVVGIVG 366 Query: 357 VIIIDSLFAIFYFAIGI 373 VI +D++FA+ +GI Sbjct: 367 VITLDAIFAVIATTLGI 383 >gi|261880035|ref|ZP_06006462.1| ABC superfamily ATP binding cassette transporter, permease protein [Prevotella bergensis DSM 17361] gi|270333275|gb|EFA44061.1| ABC superfamily ATP binding cassette transporter, permease protein [Prevotella bergensis DSM 17361] Length = 252 Score = 205 bits (523), Expect = 7e-51, Method: Composition-based stats. Identities = 59/241 (24%), Positives = 111/241 (46%), Gaps = 1/241 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 G + G + + + FL +++M +GV + +V+LISF GAVI Q Sbjct: 11 LTTFGNYLILMGRAFSRPERMRMFLKRYVKEMAQLGVDSIGIVLLISFFIGAVICIQMKV 70 Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + + + L E + +++AG+ GS I +E+G+M++ ++IDA+ M Sbjct: 71 NIQSPWMPRWVTGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALDIM 130 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ LI P+I L+ +P L I ++ I+GA + + A + + + Sbjct: 131 GINSASYLILPKIAGLVTIMPFLVIFSSAMGIVGAYATAYIGQLMSPADLTAGMNHSFNE 190 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ +IK+ F A I V+ G++V S +G+ T VV S +++ D Sbjct: 191 WYMWMSIIKSLFFAFIIASVSSYFGYSVKGGSVDVGEASTDAVVSSSVLILFSDVFLTQL 250 Query: 368 Y 368 Sbjct: 251 L 251 >gi|307564910|ref|ZP_07627431.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A] gi|307346383|gb|EFN91699.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A] Length = 248 Score = 205 bits (523), Expect = 7e-51, Method: Composition-based stats. Identities = 59/245 (24%), Positives = 111/245 (45%), Gaps = 1/245 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G + + + + F S +R+M +GV+ + +V+LISF GAVI Sbjct: 3 IKDRLFSFGEYLMLMKRTFSRPERMRMFFKSYVREMSQLGVNSIGIVLLISFFIGAVICI 62 Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + + ++ + L E + ++++G+ GS I +E+GSM++ ++IDA Sbjct: 63 QIRLNVQSPWMPHWVSGYVTREIMLLEFSSSIMCLILSGKVGSNIASELGSMRVTQQIDA 122 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I L+ +P L I + ++GA + + I A Sbjct: 123 LEIMGINSASYLILPKILGLMTLMPFLVIFSAAIGMVGAYSTAYIGHVISPADLTEGVQH 182 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 ++ ++K F A I V+ G++V S +GK T VV+S +++ D Sbjct: 183 HFNQWFMWMSILKGFFFAFIISSVSSYMGYSVKGGSQEVGKASTDAVVKSSVLILFSDVF 242 Query: 364 FAIFY 368 Sbjct: 243 LTQLL 247 >gi|254512036|ref|ZP_05124103.1| membrane protein [Rhodobacteraceae bacterium KLH11] gi|221535747|gb|EEE38735.1| membrane protein [Rhodobacteraceae bacterium KLH11] Length = 260 Score = 205 bits (523), Expect = 7e-51, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 117/262 (44%), Gaps = 7/262 (2%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 L +G+ I+ + A + + + F ++L+ +G +P Sbjct: 6 LLGELGRAILTMLAAFGRVALF---ALDAVSHIFRPPFYPREFGIALLN----IGWLSLP 58 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 VV L + TG +A Q ++F AE +++I +RE+G +L +MIA R S+I Sbjct: 59 VVGLTAIFTGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIA 118 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEI +MK+ E+IDA+ T+ ++ L +PR+ A +I++P+L + + I G V + Sbjct: 119 AEIATMKVTEQIDALVTLSTHPMKYLTAPRVLAALITVPVLVGVGDIIGIAGGYTVATQN 178 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 A + + +I + L+K I+ G G + +G+ Sbjct: 179 LGFNPAAYLKNTVDFLEMRDIVSSLVKGAAFGVIAAIMGCYYGMNSGRGAQGVGRATKGS 238 Query: 350 VVQSISIVIIIDSLFAIFYFAI 371 V + +++ + + +F++ Sbjct: 239 VEAAAVLILAANFVLTGVFFSL 260 >gi|33863666|ref|NP_895226.1| putative transporter, membrane component [Prochlorococcus marinus str. MIT 9313] gi|33635249|emb|CAE21574.1| possible transporter, membrane component [Prochlorococcus marinus str. MIT 9313] Length = 248 Score = 205 bits (523), Expect = 7e-51, Method: Composition-based stats. Identities = 64/239 (26%), Positives = 113/239 (47%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + G+ A++ + + + L Q+ G +V++ G V Q A +LS Sbjct: 10 LGNSLIIGGQAVAATARGRINKVDLFDQLMEAGPGSFLIVLITGLAAGTVFNIQVAAELS 69 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + GA +++I REI LLTA ++ G+ +A A++G+MK+ E+IDAI + + Sbjct: 70 RQGAGSTVGGILAIGMAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTEP 129 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A+++ P+ IL A+ + Y IP VF++ + T ++ Sbjct: 130 VEYLVVPRVIAMVVMAPVQCILFFGIALWSGQVSSTNLYQIPPEVFWNSVRTWLTPDDLP 189 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 LIK+ I ++A G +G T VV ++ V ++D L F+ Sbjct: 190 FMLIKSLVFGLQIAVLACGWGLTTRGGPKEVGTSTTGAVVMTLVTVSLMDVLLTQILFS 248 >gi|168022425|ref|XP_001763740.1| ATP-binding cassette transporter, subfamily I, member 14, ABC component protein PpABCI14 [Physcomitrella patens subsp. patens] gi|162684984|gb|EDQ71382.1| ATP-binding cassette transporter, subfamily I, member 14, ABC component protein PpABCI14 [Physcomitrella patens subsp. patens] Length = 263 Score = 205 bits (523), Expect = 8e-51, Method: Composition-based stats. Identities = 53/237 (22%), Positives = 114/237 (48%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 G+ + + + + + ++Q+ VG + V +L + G V Q + ++ Sbjct: 16 AAFIIAGQVIIRTLRGRIHVRNTLQQLELVGPRSLGVSLLTASFVGMVFTIQFVREFARL 75 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 G ++++ RE+ ++TA+++AGR GSA AE+G+M+++E+ D +R + D V Sbjct: 76 GLTRSVGGVLALALARELSPVVTAIIMAGRVGSAFAAELGTMQVSEQTDTLRVLRTDPVD 135 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 L++PR+ A ++LP+LT + A+ + ++ Y++ + ++ + Sbjct: 136 YLVTPRVIACCLALPILTTMCFAVAMAASVLLADSVYNVSANIILESAARALQPWDLIST 195 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 IK+ I IV+ G + +G+ T+ VV S+ + I D + + +F Sbjct: 196 TIKSVVFGGIISIVSCTWGVTTLGGAKGVGESTTSAVVISLVCIFIADFILSWVFFQ 252 >gi|42524509|ref|NP_969889.1| ABC-type organic solvent resistance transport system permease protein [Bdellovibrio bacteriovorus HD100] gi|39576718|emb|CAE80882.1| ABC-type organic solvent resistance transport system permease protein [Bdellovibrio bacteriovorus HD100] Length = 275 Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats. Identities = 69/271 (25%), Positives = 129/271 (47%), Gaps = 7/271 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 L +G+ + +++ S G +I E + +IR M ++G Sbjct: 7 LYKLIAGVGRYFMGTLSEVVSST---GKIILFFNESVRLIFAKPSRFAEIIRHMEFIGNQ 63 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++ L TG ++ Q F A +++ RE+G +LT +++A R+G Sbjct: 64 SIGIICLTGGFTGLALSLQLYLGFKLFNAVNMVGPTVALGITRELGPVLTGLIVAARAGG 123 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ A +G+M++NE+IDA+ MG++ + L+SPR+ A I +PLL + +F A++G+ + Sbjct: 124 AMAARLGTMRVNEQIDALDVMGVNTKQYLVSPRLVAAFICMPLLVAVFDFVAMLGSWFLC 183 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 K + AVF+ + + +I GL+K ++ GF + +G+ Sbjct: 184 VKMVGLDEAVFWQKIADFIEIRHINEGLLKGMVFGIYFALMCTYRGFNTTGGAKGVGEAT 243 Query: 347 TTCVVQSISIVIIIDSLFA----IFYFAIGI 373 VVQS+ +II+D +FY +GI Sbjct: 244 NQGVVQSMVGIIILDYFATNMIRLFYSLVGI 274 >gi|225164012|ref|ZP_03726299.1| ABC-type transport system involved in resistance to organic solvents, permease component [Opitutaceae bacterium TAV2] gi|224801394|gb|EEG19703.1| ABC-type transport system involved in resistance to organic solvents, permease component [Opitutaceae bacterium TAV2] Length = 258 Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 118/256 (46%), Gaps = 5/256 (1%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + N + LG + TG+ S+ + + R +Y G+ VPV++++ Sbjct: 2 LRTLGNHTLLTIQELGDLAQFTGKAFTSAIGSRKLSRRIFRAIYEQGIRCVPVILIVGLF 61 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG V+ QG L++FGA L+S+ +RE+G +LTA+M+ G++GSA+ AE+G + Sbjct: 62 TGLVLGLQGYHVLNRFGASGMLGTLVSLTLVRELGPVLTALMLVGQAGSALAAELGIQRN 121 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 +E+IDA+ TMG D LISPR+ A +I P+ T + G + + V+ Sbjct: 122 SEQIDALETMGADAHAYLISPRLIAALIVYPIHTAFFCLIGMFGGYLSGSVVLPLEPGVY 181 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV-----HSNSLGKKVTTCVVQ 352 +S + ++ +KA + GF + ++G T VV Sbjct: 182 WSSIDAAVQGGDVRECFLKAAIFGLLTIAICAHNGFNAHRRRSVTGARAVGASTTRAVVI 241 Query: 353 SISIVIIIDSLFAIFY 368 S V+ D + F Sbjct: 242 SCITVLAADYVITSFL 257 >gi|310817867|ref|YP_003950225.1| ABC transporter permease [Stigmatella aurantiaca DW4/3-1] gi|309390939|gb|ADO68398.1| ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1] Length = 250 Score = 205 bits (522), Expect = 9e-51, Method: Composition-based stats. Identities = 66/241 (27%), Positives = 121/241 (50%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + +LG + TG + + + +L+ ++GV +P+ +L S G VI+ Sbjct: 4 VRQRLEVLGAMAMMTGRVFSRAVRPPYDWGALVYHTEFLGVRSMPIALLTSTFAGLVISL 63 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q F L++FG + ++ + RE+ +LTA+ + R GS + AE+G+M + E++DAI Sbjct: 64 QFGFFLARFGVQYTVGRVVVLTLFRELAPVLTALTVGARIGSGMAAELGAMTVTEQVDAI 123 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R +G D +R L+ PR+ A ++ +P LT+LA+ + ++V+ Y I F +FF Sbjct: 124 RALGADPLRKLVVPRVLACLLVMPTLTVLADVIGLGAGALVVNMQYAISFDLFFQGALDA 183 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + + +G+IK IG+V +G V + +G+ T V + V + D Sbjct: 184 VLMTDFVSGVIKGAIFGVIIGLVGCFKGLTVEGGTEGVGRATTQTVAITSVSVCLADFFI 243 Query: 365 A 365 Sbjct: 244 T 244 >gi|301167973|emb|CBW27559.1| putative membrane protein [Bacteriovorax marinus SJ] Length = 292 Score = 205 bits (522), Expect = 9e-51, Method: Composition-based stats. Identities = 69/267 (25%), Positives = 124/267 (46%), Gaps = 7/267 (2%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 N + IG ++ + S + Y+FK F Q Y++G Sbjct: 32 NQIRKFVEAIGSMTMENVQGLGSICRFIFKFFY---WVFKPPYRFKLF----AEQFYFIG 84 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 + ++ L TG V+A Q F + +++I +E+ +L+ +++AGR+ Sbjct: 85 NKSLFIITLAGSFTGMVMAYQTYFGFKLINVDSLVGSVVAISLAKELAPVLSGLIVAGRA 144 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 G+A+ A+IG+MK+ E++DA+ MG+D + L PRI A +SLP+L+I+ F +G+ I Sbjct: 145 GAAMAAQIGTMKVTEQVDALEVMGIDSYQYLAVPRILAATLSLPMLSIVFLFVGNVGSYI 204 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 V I ++ S+ + +I G+IKA I ++ GF V + +GK Sbjct: 205 VGTVALLIDETMYLSKLGDFMFVGDIVQGIIKATVFGFVIAVIGTYFGFNVTKGAEGVGK 264 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFAI 371 VV + V+++D F + Sbjct: 265 GTNLAVVWGMISVLVLDYFLTSFLVQV 291 >gi|86159557|ref|YP_466342.1| hypothetical protein Adeh_3136 [Anaeromyxobacter dehalogenans 2CP-C] gi|85776068|gb|ABC82905.1| protein of unknown function DUF140 [Anaeromyxobacter dehalogenans 2CP-C] Length = 386 Score = 205 bits (522), Expect = 9e-51, Method: Composition-based stats. Identities = 87/374 (23%), Positives = 162/374 (43%), Gaps = 15/374 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +G V AG W+ + A DV ++++ +A+ + + D+ A + Sbjct: 24 EGDGALVIALAGIWRLADGLPPAADVARELDRTPAPRAAVD-AAGVAAWDSALAVFVHGV 82 Query: 62 MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + + + L+ + + +L L+ + + +G + Sbjct: 83 AQTCRTRGVPLDLRALPAGLARLLDLVREPAAP---------ASRAAPASHGIARLGVRA 133 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 ++ + +G A + + L L+ Q + G +P+V L+SF+ Sbjct: 134 LRREERLRAAVAFVGETAIAFARLAARRARLRPQDLWLLVQ--HSGAEALPIVALVSFLV 191 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G ++A G QL FGAE F D++ I +R++ L+T V +AGRSG A A++ +M + Sbjct: 192 GIILAFVGITQLRFFGAEAFVADIVGIAIVRDMAALITGVTLAGRSGGAFAAQLATMNVT 251 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 +EIDA+RT+G+ V L+ PR+ AL +PLLT+ A+ S I+G ++V P A + Sbjct: 252 QEIDALRTLGISPVEYLVVPRVLALTAMMPLLTLFADASGILGGAMVGTTMLHQPLAGYL 311 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + ++ GL+K I + G + +G+ T VV I +I Sbjct: 312 HQTALALVPGDLAGGLVKGATYGLLIALTGAFRGMQAERSAERVGEAATQAVVTGIVAII 371 Query: 359 IIDSLFAIFYFAIG 372 ++ +F G Sbjct: 372 SACGVYQYVFFLFG 385 >gi|212690525|ref|ZP_03298653.1| hypothetical protein BACDOR_00007 [Bacteroides dorei DSM 17855] gi|212666874|gb|EEB27446.1| hypothetical protein BACDOR_00007 [Bacteroides dorei DSM 17855] Length = 248 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 67/243 (27%), Positives = 112/243 (46%), Gaps = 1/243 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G I G A + + F + +M +GV+ + +V+LISF GAVI Q Sbjct: 6 ITTVGKYIMLMGRTFARPERMRMFFKQYLNEMVQLGVNSIGIVLLISFFIGAVITIQIKL 65 Query: 189 QLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + F + + + L E + +++AG+ GS I +EIG+M++ ++IDA+ M Sbjct: 66 NIESPWMPRFVVGYTTREIMLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALEIM 125 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ LI P+I AL+ +P L I + FS IIGA W + + Sbjct: 126 GVNSAGYLILPKIIALMTMIPFLVIFSIFSGIIGAFCTCWFGGVMNAEDLAYGLQYSFQE 185 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ IK+ F A I V+ G+ V S ++GK T VV S +++ D + Sbjct: 186 WFVWCSFIKSIFFAFIISSVSAYFGYTVEGGSIAVGKASTDSVVMSSVLILFSDLVLTQL 245 Query: 368 YFA 370 Sbjct: 246 LMG 248 >gi|99081621|ref|YP_613775.1| hypothetical protein TM1040_1780 [Ruegeria sp. TM1040] gi|99037901|gb|ABF64513.1| protein of unknown function DUF140 [Ruegeria sp. TM1040] Length = 260 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 57/250 (22%), Positives = 116/250 (46%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 S + LG + + + + L + VG +PVV L + TG Sbjct: 11 GRASLGRLAALGRITRFAASTFSHMLRPPFYPRELANALLQVGWLSLPVVALTAIFTGGA 70 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A Q ++F AE +++I +RE+G +L +MIA R S+I AEI +M++ E+I Sbjct: 71 LALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMRVTEQI 130 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ T+ + ++ L++PR+ A ++++P+L + + I+G +V + D A + Sbjct: 131 DALVTLSTNPMKYLVAPRVLAALLTVPVLVGVGDIIGIMGGYVVATETLDFNAAAYLKNT 190 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 L +I + L+K ++ G G + +G+ V + +++ + Sbjct: 191 VDFLELRDIVSSLVKGAAFGTIAALMGCYYGMQSGRGAQGVGRATKGSVEAAAVLILAAN 250 Query: 362 SLFAIFYFAI 371 + +F++ Sbjct: 251 FVLTGVFFSL 260 >gi|51210044|ref|YP_063708.1| conserved hypothetical plastid protein [Gracilaria tenuistipitata var. liui] gi|50657798|gb|AAT79783.1| conserved hypothetical plastid protein [Gracilaria tenuistipitata var. liui] Length = 252 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 58/216 (26%), Positives = 107/216 (49%) Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 S++ Q+ VG + +VI+ +F G V Q + A +++I +RE+ + Sbjct: 28 SVLEQIKIVGPDSLNIVIITAFFLGMVFTIQIVKEFLYINAAALIGSVLTIAFIRELSPV 87 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 LT+V+I GR S AE+ +M + E+++A+ + + ++ L+ PR+ A I+ LP L I + Sbjct: 88 LTSVIIVGRIASYFTAELATMSVTEQLNALYLLETNPLKYLVLPRVIACILMLPCLNIFS 147 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 +++ +S + + Y I +FF S+ + +IF L+K I ++ G Sbjct: 148 FITSLFSSSFICFTVYSIHPEIFFVSSFSSLIVQDIFKSLLKTIVFGFLIASISCFWGLK 207 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +GK T VV S+ V I D L + F+ Sbjct: 208 ATGGAKGVGKSTTLSVVTSLLAVFIFDFLLSYIMFS 243 >gi|304383590|ref|ZP_07366049.1| ABC superfamily ATP binding cassette transporter permease protein [Prevotella marshii DSM 16973] gi|304335114|gb|EFM01385.1| ABC superfamily ATP binding cassette transporter permease protein [Prevotella marshii DSM 16973] Length = 261 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 61/238 (25%), Positives = 110/238 (46%), Gaps = 1/238 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + G A + + FL + +M +GV+ + +V+LISF GAVI Q Sbjct: 20 LTTLGAYLILMGRAVAKPERMRMFLKRYVAEMSALGVNSIGIVLLISFFIGAVICIQMKL 79 Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + F + L E + +++AG+ GS I +E+G+M++ ++IDA+ M Sbjct: 80 NIQSPWMPRFVTGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALDIM 139 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ LI P+I ++ +P L I+++ + I+GA + + + Sbjct: 140 GVNSACYLILPKIIGMVTIMPFLVIISSATGILGAYATSYIGHVLSPEDLTIGLQHQFNP 199 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 ++ +IK+ F A I V+ G+ V S +GK T VV S +++ D Sbjct: 200 WFVWMSIIKSLFFAFIISSVSSYFGYTVQGGSVEVGKASTDAVVSSSVLILFSDVFLT 257 >gi|300313364|ref|YP_003777456.1| organic solvents resistance ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300076149|gb|ADJ65548.1| ABC-type transport system involved in resistance to organic solvents, permease component protein [Herbaspirillum seropedicae SmR1] Length = 259 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 57/265 (21%), Positives = 131/265 (49%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 L +G+ + +F+ + ++ ++ + Q++++G Sbjct: 2 IAGLVSGLGRSLREFVVGVGFAGRMFASMLGSSLGLLRRP-------RLITDQIHFIGNY 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++ + G V+ QG + L+++G+E L+++ RE+G ++TA++ AGR+G+ Sbjct: 55 SLVIIAVSGLFVGFVLGLQGYYTLNKYGSEQALGLLVALSLTRELGPVVTALLFAGRAGT 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 ++ AEIG MK E++ A+ M ++ ++ +++PR WA +I++P+L + + +IG +V Sbjct: 115 SLTAEIGLMKAGEQLSAMEMMAVNPLQRVVAPRFWAGVIAMPVLAAIFSAVGVIGGYVVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + F+S+ + +I G++K+ A+ VA+ +G+ + + Sbjct: 175 VLLIGVDEGAFWSQMQGGVDVWNDIANGVLKSVVFGVAVTFVALFQGYEAKPTPEGVARA 234 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + +V+ +D L F+ Sbjct: 235 TTRTVVIASLLVLGLDFLLTALMFS 259 >gi|58039399|ref|YP_191363.1| ABC transporter permease protein [Gluconobacter oxydans 621H] gi|58001813|gb|AAW60707.1| ABC transporter permease protein [Gluconobacter oxydans 621H] Length = 261 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 61/266 (22%), Positives = 126/266 (47%), Gaps = 7/266 (2%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 N+ + +G+ + I + + A + + ++ F SLI G Sbjct: 2 NAVLDPIAALGRAALGLIKQAGALAL---FALEALSHLVRPPFYWRIFFSSLIE----TG 54 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 +PVV L + +GAVIA Q Q+ + ++ + RE+G +L +M+AGR Sbjct: 55 FFSLPVVALTALFSGAVIALQSYVGFGQYHVQSAIAGIVVLAVTRELGPVLAGLMVAGRV 114 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 G+A+ A+IG+M++ ++IDA+ T+ + ++ L++PR+ A ++LP L ++A+ ++G Sbjct: 115 GAAMSAQIGTMRVTDQIDALTTLSTNPMKYLVTPRLLAGTLALPCLVLVADILGVMGGFT 174 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 V + + + + ++ GL+KA I ++ G+ + +G Sbjct: 175 VSVAKLGFSPSTYITATLDSLKTMDVVVGLVKAAVFGFLIALLGCYNGYNSRGGAEGVGS 234 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + ++++ D L +F+ Sbjct: 235 ATTAAVVGASILLLLFDYLLTDLFFS 260 >gi|300728342|ref|ZP_07061707.1| conserved hypothetical protein [Prevotella bryantii B14] gi|299774407|gb|EFI71034.1| conserved hypothetical protein [Prevotella bryantii B14] Length = 252 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 62/241 (25%), Positives = 112/241 (46%), Gaps = 1/241 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +LG I G+ + + + + I++M +GV + +V+LISF GAVI Q Sbjct: 11 LTVLGTYIQLMGKVFSRPERLRMYSKQYIKEMTQLGVDSIGIVLLISFFIGAVICIQMKL 70 Query: 189 QLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + + + + L E + ++++G+ GS I +E+G+M++ ++IDA+ M Sbjct: 71 NIQSPWMPRWVAGYTTREIMLLEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALDIM 130 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ LI P+I AL+ +P L I ++ I+GA + + + Sbjct: 131 GVNSASYLILPKIAALVTIMPFLVIFSSAMGIVGAYGTAYIGQILSPEDLTLGIQHSFNQ 190 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 I+ +IK+ F A I V+ G+ V S +GK TT VV S +++ D Sbjct: 191 WFIWMSIIKSLFFAFIISSVSSYFGYTVEGGSVEVGKASTTAVVNSSVLILFSDVFLTQM 250 Query: 368 Y 368 Sbjct: 251 L 251 >gi|320007322|gb|ADW02172.1| protein of unknown function DUF140 [Streptomyces flavogriseus ATCC 33331] Length = 282 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 62/247 (25%), Positives = 108/247 (43%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G + + + ++ + I Q ++V + L+S GAVIA Sbjct: 30 LLAPLRQTGQLFALALAVARAIFRRPFQVREFIEQFWFVASVTILPAALVSIPFGAVIAL 89 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q GA+ F+ + +++ L+ A++IAG +GSAI A++GS KI EE+DA+ Sbjct: 90 QVGSLTEQLGAQSFTGGASVLAVIQQASPLIVALLIAGAAGSAICADLGSRKIREELDAM 149 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ V+ L+ PR+ A + LL L + +G + + F + Sbjct: 150 EVMGVSPVQRLVVPRVLATMFVAVLLNGLVSVVGTLGGYFFNVIMQGGTPGAYLASFSAL 209 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A L +++ G +KA GIVA G +G V VV + ++ ++ + Sbjct: 210 AQLPDLYVGELKALIFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFAVNMVL 269 Query: 365 AIFYFAI 371 Y I Sbjct: 270 TAIYLQI 276 >gi|158521034|ref|YP_001528904.1| hypothetical protein Dole_1017 [Desulfococcus oleovorans Hxd3] gi|158509860|gb|ABW66827.1| protein of unknown function DUF140 [Desulfococcus oleovorans Hxd3] Length = 385 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 88/362 (24%), Positives = 161/362 (44%), Gaps = 2/362 (0%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 +G ++ D+ + + + +DL+ IT +D G + F Sbjct: 21 GITIHVSGALTIDSHQSLSADLHKILERRQGACPIRLDLADITSVDDFGVLAVENFKSVA 80 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 K V Q L N P + + ++ +G ++ I Sbjct: 81 IQKGCGVVVVQVTGQAQRLFQLFSGIADLNAVPPHASASHGLLDVIPEVGNTVIGGIKRV 140 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 S +G ++ S F+ + I + GV +P++ LI + G + A Sbjct: 141 DSSIAFVGSILFAFMRALFSPRSFR--MADTIELIRRDGVDAIPIIGLIGIIIGLISAFV 198 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 + QL++ G +I+ +++ + EIG ++TA+++AGR+GSA AEIG+MKI+EE+DA+ Sbjct: 199 SSVQLTKLGGDIYIPAMITFAMVAEIGPMMTAIVVAGRTGSAYAAEIGTMKISEEVDALI 258 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 +MG D L PRI AL++ LP+LT+ + A++G +V ++ + Sbjct: 259 SMGFDPTLFLAIPRITALVVVLPILTVCSVIFALLGGLVVCVTLLNLQMGPYLEGVSDAL 318 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + ++ L K+ A I ++ GF V + S+G T+ VV I +I+ DS+ A Sbjct: 319 FIDDVLWALAKSGIFALLIAVIGCLRGFQVRGGAASVGGAATSAVVTGIFFIILADSVVA 378 Query: 366 IF 367 + Sbjct: 379 LI 380 >gi|162448883|ref|YP_001611250.1| putative ABC transporter permease protein [Sorangium cellulosum 'So ce 56'] gi|161159465|emb|CAN90770.1| putative ABC transporter permease protein [Sorangium cellulosum 'So ce 56'] Length = 287 Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats. Identities = 68/243 (27%), Positives = 111/243 (45%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ++ LG T S + + S + QM +GV + + + G V+ Sbjct: 35 ENAVGFVEHLGQFGRMTWGALRSMVERPLEIRSTLYQMEALGVRSAAIASVTALFVGMVM 94 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A Q A L +FG ++ ++ + RE+ LTAV++ GR G+ I AE+GSM + E+ID Sbjct: 95 AVQFAIGLQKFGGMEYTGRIIGLSFSRELAPTLTAVIVGGRIGAGIAAEVGSMAVTEQID 154 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 AIR +G ++ L+ PR+ A I+ +P+L A GA +V + IP F Sbjct: 155 AIRALGASPLKKLVLPRLLASIVVMPVLGAFALVLGFGGAMLVCATEFGIPAGFFLRTAL 214 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + T + F+G+ K PF I +V G + +G T VV + ++I D Sbjct: 215 GSVTFMDYFSGMYKTPFFGAIIALVGCHFGLITRGGTEGVGHATTRTVVVTSITILIADF 274 Query: 363 LFA 365 Sbjct: 275 FLT 277 >gi|187734672|ref|YP_001876784.1| protein of unknown function DUF140 [Akkermansia muciniphila ATCC BAA-835] gi|187424724|gb|ACD04003.1| protein of unknown function DUF140 [Akkermansia muciniphila ATCC BAA-835] Length = 266 Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats. Identities = 73/262 (27%), Positives = 134/262 (51%), Gaps = 10/262 (3%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 IG+ ++ ++ LG + + + + + + L+ Q+ +GV PVVI+ Sbjct: 9 IGRAALRLVDR-------LGSIGLLLYQVASCMWSGQFRMRVLVEQIAKIGVQSQPVVII 61 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 TGAV+ Q FQL E ++++ RE+G ++T +M+AGR GSA+ AEIG Sbjct: 62 TGAFTGAVLEAQTLFQLQTVRMETMGGAVVAVGMFRELGPVITGLMLAGRVGSAMAAEIG 121 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 +MK+ E++DA+++M +D V L+ PRI A++IS+P+L + A I A IV +++ Sbjct: 122 TMKVTEQVDALKSMNVDPVDYLVKPRIQAMLISMPILMMEAVLVGIASAYIVSVTAFNVD 181 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 A + T+ +I L+KA I ++ +EG + +GK +V + Sbjct: 182 QAYWMHFMSKFVTMGDIIVALVKALAFGLIISTISCREGLNTTNGAVGVGKSTMQAMVYA 241 Query: 354 ISIVIIIDSLFAIF---YFAIG 372 ++I + + + +F +G Sbjct: 242 SVALLIANFILTMILNSFFPMG 263 >gi|281356107|ref|ZP_06242600.1| protein of unknown function DUF140 [Victivallis vadensis ATCC BAA-548] gi|281317476|gb|EFB01497.1| protein of unknown function DUF140 [Victivallis vadensis ATCC BAA-548] Length = 263 Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats. Identities = 75/242 (30%), Positives = 126/242 (52%), Gaps = 3/242 (1%) Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190 +G V S + + L + + G +P+V+LI F+ G V+A G QL Sbjct: 24 FIGRVASAL-PLLRQKRQLR--LKETLYYLDLCGAQSLPLVLLICFLMGGVLAINGQIQL 80 Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 S+FG+EIF +D++ L+E G L+ A++ G++GSA +EIG+MK++EEI A+ T+G+ Sbjct: 81 SKFGSEIFIVDMVGFSVLKEFGPLMVALIATGQAGSAFASEIGTMKVDEEISALETLGIR 140 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 L+ P++ A++I+LPLLT+ +F+ + G V +P A + R Sbjct: 141 PAAYLVLPKLIAMLIALPLLTVFGDFAGLTGGLAVGITVAGLPLAAYVERTLDILDSTTF 200 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G++K+ A I + GF + +G+ T VV SI V++ +L + Y Sbjct: 201 LLGVLKSFVFAVLITLAGCYCGFRSSGDAQGVGRAATAAVVISILFVVVATALLTVLYSF 260 Query: 371 IG 372 IG Sbjct: 261 IG 262 >gi|220907786|ref|YP_002483097.1| hypothetical protein Cyan7425_2378 [Cyanothece sp. PCC 7425] gi|219864397|gb|ACL44736.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7425] Length = 255 Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats. Identities = 61/234 (26%), Positives = 111/234 (47%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 + G+ + + +L+ Q+ VG + V+LI+ TG + Q +LSQFG Sbjct: 21 TLFIFGQVWMRILQRRIHRDNLLEQLAIVGWGSLLAVVLINTFTGVLFTIQTTRELSQFG 80 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 A+ ++ RE+ +LTA ++ G SA AEIG M++ ++IDA+ + D + Sbjct: 81 AKSLVGGAFALGYCRELAPVLTAGLLVGEVSSAFAAEIGEMRVTDQIDALYILHTDPIDY 140 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L+ PR+ + + LP+LT+LA A++G ++ K Y IP VF + + + ++ + Sbjct: 141 LVVPRVLSCCLMLPVLTVLAIGGAMLGGTLAGAKIYGIPPTVFLNSIQAVLEVGDLCGIV 200 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 +KA G+V G + + K VV +V + + I+ Sbjct: 201 LKAFIFGIITGLVGCGWGLTTTGGAKGVSKSTKAAVVNGWILVFFANFVLTIWL 254 >gi|332178184|gb|AEE13873.1| protein of unknown function DUF140 [Thermodesulfobium narugense DSM 14796] Length = 250 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 68/246 (27%), Positives = 120/246 (48%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G + + + + Q + +GV VP+V + S G V A Sbjct: 4 FIEFFSDVGQLSYLFFRSIVAVLTARFRFFLFLDQCFMIGVESVPIVFITSLFVGMVFAI 63 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q A + +GA ++ I +RE+G ++T V++AGR GSA+ AEIG+MK+ E+IDA+ Sbjct: 64 QTAREFVFYGAGSVVGGVVGIAIIRELGPMITGVVVAGRVGSAMAAEIGTMKVTEQIDAL 123 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 +M +D + L++PR++A ++ LPLLT++AN + +IG V Y + + F Sbjct: 124 LSMSVDPIFYLVAPRVFACMLMLPLLTVIANLAGVIGGYFVAVYYGGVIPSSFVESVRFL 183 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + +I LIKA I ++ G + +G VV S+ ++ I + Sbjct: 184 VKVWDIEASLIKAMIFGSIISLIGTFIGLRTKAGARGVGNSTMLSVVISLILIFIFNYFL 243 Query: 365 AIFYFA 370 ++ F+ Sbjct: 244 SMVMFS 249 >gi|303270959|ref|XP_003054841.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545] gi|226462815|gb|EEH60093.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545] Length = 251 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 56/223 (25%), Positives = 110/223 (49%) Query: 147 YKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206 ++ K + I+Q+ VG + V +L S G V Q + S+ G L+ + Sbjct: 29 WQRKLNMAQTIQQIARVGPDTLGVAMLTSSFVGMVFTIQFCKEFSKVGLTRVIGGLLGLA 88 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 RE+ ++ A+++AGR GSAI AE+G+M+++E++D +RT+G D V L++PR+ A +S Sbjct: 89 FTRELTPVICAIVLAGRVGSAIAAELGTMQVSEQVDQLRTLGSDPVDYLVAPRVVACALS 148 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326 LP+L++++ + + ++ Y I ++I +K I Sbjct: 149 LPILSVVSFTIGMAASILLADLRYGISPNAIVDSAAKYLETSDIGVMCVKGLAFGGVIAT 208 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 ++ G + +G+ T VV S+ + ++D ++ +F Sbjct: 209 ISCGWGQTTTGGAKGVGESTTASVVISLVAIFVVDFFLSMIFF 251 >gi|325855171|ref|ZP_08171794.1| hypothetical protein HMPREF9303_0352 [Prevotella denticola CRIS 18C-A] gi|327312571|ref|YP_004328008.1| hypothetical protein HMPREF9137_0267 [Prevotella denticola F0289] gi|325483908|gb|EGC86852.1| hypothetical protein HMPREF9303_0352 [Prevotella denticola CRIS 18C-A] gi|326944406|gb|AEA20291.1| conserved hypothetical protein [Prevotella denticola F0289] Length = 248 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 60/241 (24%), Positives = 110/241 (45%), Gaps = 1/241 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 + G + G + + + FL +++M +GV + +V+LISF GAVI Q Sbjct: 7 LNTFGNYLILMGRSFSRPERMRMFLKRYVKEMSQLGVDSIGIVLLISFFIGAVICIQIKL 66 Query: 189 QLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + + ++ + L E + ++++G+ GS I +E+G+M++ ++IDA+ M Sbjct: 67 NVQSPWMPHWVSGYVTREIMLLEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALEIM 126 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ LI P++ LI +P L I + + IIGA + + I + Sbjct: 127 GINSASYLILPKMLGLITIMPFLVIFSAATGIIGAYATAYIGHIITPIDLTAGLQHDFNP 186 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ +IK F A I V+ G+ V S +GK T VV S +++ D Sbjct: 187 WFMWMSIIKGFFFAFIISSVSSYMGYTVKGGSVEVGKASTDAVVCSSVLILFSDVFLTQV 246 Query: 368 Y 368 Sbjct: 247 L 247 >gi|124022277|ref|YP_001016584.1| transporter membrane component [Prochlorococcus marinus str. MIT 9303] gi|123962563|gb|ABM77319.1| possible transporter, membrane component [Prochlorococcus marinus str. MIT 9303] Length = 248 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 61/239 (25%), Positives = 113/239 (47%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + G+ A++ + + + L Q+ G +V++ G V Q A +LS Sbjct: 10 LGSSLIIGGQAVAATARGRINKVDLFDQLMEAGPGSFLIVLITGLAAGTVFNIQVAAELS 69 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + GA +++I REI LLTA ++ G+ +A A++G+MK+ E+IDAI + + Sbjct: 70 RQGAGSTVGGILAIGMAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTEP 129 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A+++ P+ +L A+ + Y IP VF++ + T ++ Sbjct: 130 VEYLVVPRVIAMVVMAPVQCMLFFGIALWSGQVSSTNLYQIPPEVFWNSVRTWLTPDDMP 189 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 L+K+ I +++ G +G T VV ++ V ++D L F+ Sbjct: 190 FMLVKSLVFGLQIAVLSCGWGLTTRGGPKEVGTSTTGAVVMTLVTVSLMDVLLTQILFS 248 >gi|282878075|ref|ZP_06286880.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310] gi|281299815|gb|EFA92179.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310] Length = 250 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 113/245 (46%), Gaps = 2/245 (0%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 I + G + G + + F +++M +GV +P+V+LISF GAV Sbjct: 3 IKLLITYLTTFGEYLILMGRTFRRPERMRMFFKRYVKEMCQLGVDSIPLVLLISFFIGAV 62 Query: 182 IAQQGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 I Q + ++ + + L E +++AG+ GS I +E+G+M++ ++ Sbjct: 63 ICIQMKVNVQSPWMPRWTTGYVTREIFLLEFASAFMCLILAGKVGSNIASELGTMRVTQQ 122 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ MG++ LI P+I LI +P L I ++ + IIGA + + + Sbjct: 123 IDALDIMGVNPASYLILPKIAGLITIMPFLVIFSSVAGIIGAYGTAYS-GVLSPDDLTAG 181 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 F + + ++ +IK+ A I V+ G++V S +G+ T VV S +V+ Sbjct: 182 FQYSFNVWFVWMSIIKSIVFAFIIASVSSFYGYSVRGGSVEVGEASTNAVVSSSVLVLFA 241 Query: 361 DSLFA 365 D Sbjct: 242 DVFLT 246 >gi|332107650|gb|EGJ08874.1| hypothetical protein RBXJA2T_01025 [Rubrivivax benzoatilyticus JA2] Length = 260 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 58/265 (21%), Positives = 122/265 (46%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 IG+ ++++ A+ ++ ++ ++ Q++ +G Sbjct: 1 MTAALQFIGRFTLEWLRALGHAAYFFVDLLRHSPAALRR-------FSLVVAQIHAIGNR 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + +++ G V+A Q + L +GA ++++ +RE+G ++ A++ AGR+G+ Sbjct: 54 SLVIILASGMAVGFVLALQMYYALVTYGAAESLGLVVNLSLVRELGPVVAALLFAGRAGT 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 ++ AEIG MK E++ A+ M +D +++PR IIS+PLL L + I+GA +V Sbjct: 114 SLTAEIGLMKAGEQLAAMELMAIDPRSRVLAPRFLGGIISMPLLAALFSAIGILGAWVVA 173 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + F+S S+ + ++ G++K+ VA+ +G+ + Sbjct: 174 VLLIGVDAGNFWSIMQSSVDVWRDVGNGIVKSFVFGVICTAVALYQGYETQATPEGVAHA 233 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + V+ +D L F+ Sbjct: 234 TTRTVVIASLAVLAMDFLLTALMFS 258 >gi|78213612|ref|YP_382391.1| hypothetical protein Syncc9605_2096 [Synechococcus sp. CC9605] gi|78198071|gb|ABB35836.1| Protein of unknown function DUF140 [Synechococcus sp. CC9605] Length = 249 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 65/239 (27%), Positives = 115/239 (48%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + G+ A++ + + L+ Q+ G V +V++IS G+V Q A +L+ Sbjct: 10 LGASLLIGGQAVAATLRGRIDRGELLEQLLDAGPGSVLIVLIISVAAGSVFNIQVAAELT 69 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + GA +++I REI LLT+ ++AG+ +A A++G+MK+ E+IDAI + D Sbjct: 70 RQGAGSTVGGILAIGLAREIAPLLTSCLLAGKVATAYAAQLGTMKVTEQIDAITMLRTDP 129 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A+++ P+ A+ + Y+IP AVF++ + ++ Sbjct: 130 VEYLVVPRMIAMVVMAPVQCFFFFLVAVWSGQLTSTALYNIPPAVFWTSVRTWMAPLDLP 189 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 L+KA I VA G +G T VV + +V ++D + F Sbjct: 190 FMLVKAVVFGMIIATVACGWGLTTRGGPKEVGTSTTGAVVMILILVALMDVVLTQVLFG 248 >gi|189500799|ref|YP_001960269.1| hypothetical protein Cphamn1_1871 [Chlorobium phaeobacteroides BS1] gi|189496240|gb|ACE04788.1| protein of unknown function DUF140 [Chlorobium phaeobacteroides BS1] Length = 264 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 61/243 (25%), Positives = 115/243 (47%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + + K + + + Q G +P+V++ S GA++A Sbjct: 17 MKEFFLTMQDFFLFSLRAFITIPKIRRYWRDFLDQAKIAGADSLPIVLVSSIAIGALLAV 76 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 + L FGA+ ++ +RE+G L+ +M++ R GS AE+G+MKI+E+IDA+ Sbjct: 77 EVGNLLEDFGAKTMLGRSTALSVIRELGPLIMGLMLSARYGSRNGAELGAMKISEQIDAL 136 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R G D V L+ PR+ A +I LT +A+FS + A+++ Y+ I +F++ Sbjct: 137 RAFGTDPVAKLVMPRLVAALIMFIPLTAIADFSGLYSAALLAEHYHKIDPGIFWNAVFPR 196 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + G +KAP A I +V+ GF + +G+ +V S ++++ + Sbjct: 197 LVFKDFVVGFLKAPVFAIIITLVSCFNGFIAQGGTAGVGRSTIKGIVVSSGLILVANFYV 256 Query: 365 AIF 367 + Sbjct: 257 SKL 259 >gi|218885146|ref|YP_002434467.1| hypothetical protein DvMF_0038 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756100|gb|ACL06999.1| protein of unknown function DUF140 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 381 Score = 203 bits (518), Expect = 3e-50, Method: Composition-based stats. Identities = 85/375 (22%), Positives = 164/375 (43%), Gaps = 9/375 (2%) Query: 2 SENGITVFRF--AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLS-AITEIDTIGAELI 58 G T R +G W + A + ++ ++ + + D+ A + Sbjct: 13 GTQGATSLRLAVSGAWNLDAPPDGAARASAMARLREPGVATVILVAEGLGDWDSSLAIFV 72 Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + + + +S L + + + + ++ L IG+ + Sbjct: 73 AGVVR----ACRERNLSVDTSGLPAGLIRLVDLSFAVPERAGAARGDARSGLLERIGEAV 128 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + S +G V + L++ M G + +P+V LIS + Sbjct: 129 LALPMPVGSTLDFIGEVAFALYRLARGKADMRR--RDLLQFMSESGSAALPIVSLISMLV 186 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G ++A GA QL FGA+I+ L++I +R +G ++T + +AGR+G++ A +G+M++N Sbjct: 187 GLILAFVGAVQLRVFGAQIYVASLVAIAMVRVMGAIMTGITMAGRTGASYAAILGTMQVN 246 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE+DA+ TMGL V L+ PR+ AL++ LPLLT+ A+ ++G IV D+ + Sbjct: 247 EEVDALATMGLRPVEQLVLPRLLALVVMLPLLTVYADLMGMLGGFIVGVFMLDLNPMEYL 306 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + +LAN++ G+ + + G G ++++G T VV I +I Sbjct: 307 NATREALSLANLWIGITHGAVFGVVVALCGCYHGMRCGRSASAVGAATTAAVVSGIVSII 366 Query: 359 IIDSLFAIFYFAIGI 373 + + + +GI Sbjct: 367 VCTAFITVACEVLGI 381 >gi|111018970|ref|YP_701942.1| ABC transporter permease [Rhodococcus jostii RHA1] gi|226361065|ref|YP_002778843.1| YrbE family protein [Rhodococcus opacus B4] gi|110818500|gb|ABG93784.1| possible ABC transport system, permease component [Rhodococcus jostii RHA1] gi|226239550|dbj|BAH49898.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 264 Score = 203 bits (518), Expect = 3e-50, Method: Composition-based stats. Identities = 58/256 (22%), Positives = 122/256 (47%), Gaps = 5/256 (1%) Query: 117 KIVKFINDSCSQAHILGLVISNTGE-FCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +++ +N + +QA + + + ++F+ F I Q +++ + +++ Sbjct: 7 SVLRPVNGALTQAGNIVELFVDVARNTFKRPFQFREF----IEQAWFIASVTILPTAMVA 62 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 GAV++ Q + Q GAE F+ + +++ L+TA+++AG +GSA+ A++G+ Sbjct: 63 IPFGAVVSLQTGSLIKQLGAESFTGAASVLAVIQQGSPLVTALLVAGAAGSAVTADLGAR 122 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 I EEIDA+ +G++ ++ L+ PR+ A+++ LL L + I G Sbjct: 123 TIREEIDAMEVLGINPIQRLVVPRVLAMVLVAILLNGLVSVVGIAGGYFFNVILQGGNPG 182 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + + F + A L +I+ G +KA G++A +G +G V VV + Sbjct: 183 AYLASFSAFAQLPDIWVGELKAAVFGVIAGVIAAYKGLHPKGGPKGVGDAVNQSVVITFL 242 Query: 356 IVIIIDSLFAIFYFAI 371 ++ + + + Y I Sbjct: 243 LLFFANLILTMVYLQI 258 >gi|288924563|ref|ZP_06418500.1| ABC transporter, permease [Prevotella buccae D17] gi|315607425|ref|ZP_07882421.1| ABC superfamily ATP binding cassette transporter permease protein [Prevotella buccae ATCC 33574] gi|288338350|gb|EFC76699.1| ABC transporter, permease [Prevotella buccae D17] gi|315250857|gb|EFU30850.1| ABC superfamily ATP binding cassette transporter permease protein [Prevotella buccae ATCC 33574] Length = 248 Score = 203 bits (518), Expect = 3e-50, Method: Composition-based stats. Identities = 58/245 (23%), Positives = 108/245 (44%), Gaps = 1/245 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + G + + + F+ +++M +GV + +V+LISF GAVI Sbjct: 3 ILKWLTTFGKYLILMGRSFSRPERMRMFMKRYVKEMSQLGVDSIGIVLLISFFIGAVICI 62 Query: 185 QGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + + + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 63 QMKLNIQSPWMPRWVSGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 122 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I L+ +P L I ++ IIGA + + + Sbjct: 123 LDIMGVNSAGYLILPKILGLVTIMPFLVIFSSAMGIIGAYATAYVGHILSPDDLTLGLQH 182 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++ +IK+ F A I V+ G+ V S +G+ T VV S +++ D Sbjct: 183 SFNAWFVWMSIIKSLFFAFIIASVSSYFGYTVEGGSVEVGESSTDAVVCSSVLILFSDVF 242 Query: 364 FAIFY 368 Sbjct: 243 LTQVL 247 >gi|288803886|ref|ZP_06409311.1| ABC transporter, permease [Prevotella melaninogenica D18] gi|302345895|ref|YP_003814248.1| hypothetical protein HMPREF0659_A6184 [Prevotella melaninogenica ATCC 25845] gi|288333651|gb|EFC72101.1| ABC transporter, permease [Prevotella melaninogenica D18] gi|302149082|gb|ADK95344.1| conserved hypothetical protein [Prevotella melaninogenica ATCC 25845] Length = 248 Score = 203 bits (518), Expect = 3e-50, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 109/241 (45%), Gaps = 1/241 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 G + G + + + FL +++M +GV + +V+LISF GAVI Q Sbjct: 7 LTTFGNYLILMGRSFSRPERMRMFLKRYVKEMSQLGVDSIGIVLLISFFIGAVICIQIKL 66 Query: 189 QLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + + ++ + L E + ++++G+ GS I +E+G+M++ ++IDA+ M Sbjct: 67 NVQSPWMPHWVSGYVTREIMLLEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALEIM 126 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ LI P+I LI +P L I + + IIGA + + I + Sbjct: 127 GINSASYLILPKIMGLITIMPFLVIFSAATGIIGAYATAYLAHIITPVDLTAGLQHDFNP 186 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ +IK F A I V+ G+ V S +GK T VV S +++ D Sbjct: 187 WFMWMSIIKGFFFAFIISSVSSYMGYTVKGGSVEVGKASTDAVVCSSVLILFSDVFLTQM 246 Query: 368 Y 368 Sbjct: 247 L 247 >gi|329962630|ref|ZP_08300578.1| hypothetical protein HMPREF9446_02167 [Bacteroides fluxus YIT 12057] gi|328529661|gb|EGF56559.1| hypothetical protein HMPREF9446_02167 [Bacteroides fluxus YIT 12057] Length = 258 Score = 203 bits (517), Expect = 4e-50, Method: Composition-based stats. Identities = 67/254 (26%), Positives = 119/254 (46%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 VK++ +G I G A + + F I +M +GV+ + +V+LISF Sbjct: 5 AVKYLRVMIKALKTVGRYIMLMGRVFARPERMRMFFRQYINEMEQLGVNSIGIVLLISFF 64 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 GAVI Q + +++ ++ + L E + +++AG+ GS I +E+G+M+ Sbjct: 65 IGAVITIQIKLNIESPFMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 + ++IDA+ MG++ LI P+I A++ ++PL+ + F+ IIGA W + Sbjct: 125 VTQQIDALEIMGVNSANYLILPKISAMVTTIPLMVTFSIFAGIIGAFCTCWFGGIMSAVD 184 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 I+ G+IK+ F A I V+ G+ V S +GK T VV S + Sbjct: 185 LEYGLQYMFVEWFIWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVL 244 Query: 357 VIIIDSLFAIFYFA 370 ++ D + Sbjct: 245 ILFSDLILTQLLMG 258 >gi|260590590|ref|ZP_05856048.1| ABC transporter, permease [Prevotella veroralis F0319] gi|260537463|gb|EEX20080.1| ABC transporter, permease [Prevotella veroralis F0319] Length = 248 Score = 203 bits (517), Expect = 4e-50, Method: Composition-based stats. Identities = 59/241 (24%), Positives = 109/241 (45%), Gaps = 1/241 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 + G + G + + + F +++M +GV + +V+LISF GAVI Q Sbjct: 7 LNTFGNYLMLMGRSLSRPERMRMFFKRYLKEMSQLGVDSIGIVLLISFFIGAVICIQIKL 66 Query: 189 QLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + + ++ + L E + ++++G+ GS I +E+G+M++ ++IDA+ M Sbjct: 67 NVQSAWMPHWVSGYVTREIMLLEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALEIM 126 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ LI P+I L+ +P L I + + IIGA + + I + Sbjct: 127 GINSASYLILPKILGLMTIMPFLVIFSAATGIIGAYATAYFAHIITPVDLTAGLQHDFNP 186 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ +IK F A I V+ G+ V S +GK T VV S +++ D Sbjct: 187 WFMWMSIIKGFFFAFIISSVSSYMGYTVKGGSVEVGKASTDAVVCSSVLILFSDVFLTQM 246 Query: 368 Y 368 Sbjct: 247 L 247 >gi|281425287|ref|ZP_06256200.1| hypothetical protein HMPREF0971_02259 [Prevotella oris F0302] gi|299141487|ref|ZP_07034623.1| ABC transporter, permease [Prevotella oris C735] gi|281400580|gb|EFB31411.1| ABC transporter, permease [Prevotella oris F0302] gi|298576823|gb|EFI48693.1| ABC transporter, permease [Prevotella oris C735] Length = 252 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 59/248 (23%), Positives = 107/248 (43%), Gaps = 1/248 (0%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 G + G A + + F +++M +GV + +V+LISF GAV Sbjct: 4 FKLFYKYLTTFGSYLLLMGRSIAVPERMRMFFKRYVKEMSQLGVDSIGIVLLISFFIGAV 63 Query: 182 IAQQGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 I Q + + + L E + +++AG+ GS I +E+G+M++ ++ Sbjct: 64 ICIQMKVNIQSPWMPRWVSGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQ 123 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ MG++ LI P+I L+ +P L + ++ I+GA + + + Sbjct: 124 IDALDIMGVNSANYLILPKILGLVTMMPFLVVFSSALGILGAYSTAYIGHMLSPDDLTLG 183 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + I+ +IK+ F A I V+ G+ V S +GK T VV S +++ Sbjct: 184 IQHSFNAWFIWMSIIKSMFFAFVIASVSSFFGYTVEGGSVEVGKASTDAVVSSSVLILFS 243 Query: 361 DSLFAIFY 368 D Sbjct: 244 DVFLTQLL 251 >gi|189462219|ref|ZP_03011004.1| hypothetical protein BACCOP_02902 [Bacteroides coprocola DSM 17136] gi|189431072|gb|EDV00057.1| hypothetical protein BACCOP_02902 [Bacteroides coprocola DSM 17136] Length = 246 Score = 203 bits (516), Expect = 5e-50, Method: Composition-based stats. Identities = 64/241 (26%), Positives = 111/241 (46%), Gaps = 1/241 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + G A +F+ +L +M +G++ + +V+LISF GAVI Q Sbjct: 5 ITTLGKYLMLMGRVFARPERFRMYLKQYRNEMAQLGINSIGIVLLISFFIGAVICIQIKL 64 Query: 189 QLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + F + + + L E + +++AG+ GS I +EIG+M++ ++IDA+ M Sbjct: 65 NIESPWMPRFVVGYTTREILLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALDIM 124 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ LI P+I L+ +PLL + F+ +IGA W F + Sbjct: 125 GVNSASYLILPKILGLMTMIPLLVTFSIFAGVIGAFCTAWFAGITNATDLEYGFQYSFVE 184 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ IK+ A I V+ G+ V S ++GK T VV S +++ D + Sbjct: 185 WYVWCSFIKSLVFAFIIASVSAYFGYTVEGGSIAVGKASTDSVVCSSVLILFSDLILTQL 244 Query: 368 Y 368 Sbjct: 245 L 245 >gi|183221249|ref|YP_001839245.1| ABC transporter permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911340|ref|YP_001962895.1| ABC transporter membrane protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776016|gb|ABZ94317.1| Membrane protein of an ABC transporter complex [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779671|gb|ABZ97969.1| ABC-type transport system, permease; putative resistance to organic solvant; putative membrane protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 258 Score = 203 bits (516), Expect = 5e-50, Method: Composition-based stats. Identities = 64/247 (25%), Positives = 115/247 (46%), Gaps = 4/247 (1%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + +G + S++ ++ QM+ GV + VV ++S TG ++ Sbjct: 12 LLYAIGYTVLLLFRAIGQSHQLYFKRREILEQMFIAGVGSLFVVSIVSVFTGMILGLNTG 71 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L FGAE L++I RE+ +T++++A GSA+ AEIG+MK++EEIDA+ M Sbjct: 72 LGLRDFGAEGQIGLLLTITLTREMSPFMTSLILAASVGSAMAAEIGTMKVSEEIDALEVM 131 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS----RFHS 303 + +R L+ PRI + +P+L + + I+G IV I +F R S Sbjct: 132 SISPIRYLVMPRIVGFSLMVPVLCVYSAALGILGGGIVGHFQLGIDIISYFQDVYYRISS 191 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 L +++ GL+K +I ++ +G + +G+ VV S +VI + Sbjct: 192 VPGLKDLYVGLLKGYVFGLSIATISCSQGLRTEGGAIGVGQTTRKAVVTSFLMVIFSGYV 251 Query: 364 FAIFYFA 370 ++ Sbjct: 252 LTALFYK 258 >gi|116073591|ref|ZP_01470853.1| possible transporter, membrane component [Synechococcus sp. RS9916] gi|116068896|gb|EAU74648.1| possible transporter, membrane component [Synechococcus sp. RS9916] Length = 248 Score = 203 bits (516), Expect = 5e-50, Method: Composition-based stats. Identities = 67/239 (28%), Positives = 114/239 (47%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + G+ +++ + K + L Q+ G +V++ G+V Q A +LS Sbjct: 10 LGSSLLIGGQAVSATARGKINTIDLFDQLMEAGPGSFLIVLITGVAAGSVFNIQVAAELS 69 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 GA +++I REI LLTA ++ G+ +A A++G+MK+ E+IDAI + D Sbjct: 70 GMGAGSTVGGVLAIGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTDP 129 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A+++ P+ +L AI I ++Y+IP AVF++ + ++ Sbjct: 130 VEYLVVPRLIAMVVMAPVQCLLFFAVAIYSGQITSTEFYNIPPAVFWNSVRTWLQPDDLP 189 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 LIKA I ++A G +G T VV + V ++D L F Sbjct: 190 FMLIKALVFGLQIAVLACGWGLTTSGGPKEVGTSTTGSVVMILVTVALMDVLLTQILFG 248 >gi|116747850|ref|YP_844537.1| hypothetical protein Sfum_0402 [Syntrophobacter fumaroxidans MPOB] gi|116696914|gb|ABK16102.1| protein of unknown function DUF140 [Syntrophobacter fumaroxidans MPOB] Length = 258 Score = 203 bits (516), Expect = 5e-50, Method: Composition-based stats. Identities = 59/255 (23%), Positives = 120/255 (47%), Gaps = 7/255 (2%) Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 G++ V + + LG + G K + L Q+ ++G + ++ + Sbjct: 11 GRRCVHAVRLAGRSLLFLGEAL---GYGFVPPLKIRRSL----EQIVFIGAKSLIIIFVT 63 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 + TG V+A + L E L+++ +RE+G +L+A+++ GR+GSA+ AEIG Sbjct: 64 ALSTGMVLALEALHMLRGGATENILGALVALSIVRELGPVLSALIVTGRAGSAMTAEIGI 123 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 M++ E+IDA+ M ++ ++ +++P+I A ++S+P+L + I+G V Y +P Sbjct: 124 MRLTEQIDALEMMAVNPIKHVVTPKIVAGVVSMPVLCAFFDVVGILGGYFVGVVIYGVPE 183 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 FF ++ GL K+ A+ + G+ + + + T VV + Sbjct: 184 VHFFGGMTKAVAYLDVAGGLFKSAVFGLAMSWICSMMGYGAAATAEGVSRATTNAVVITS 243 Query: 355 SIVIIIDSLFAIFYF 369 V+++D + Sbjct: 244 IAVLVLDYMVTSLLL 258 >gi|317504956|ref|ZP_07962905.1| ABC superfamily ATP binding cassette transporter permease protein [Prevotella salivae DSM 15606] gi|315663948|gb|EFV03666.1| ABC superfamily ATP binding cassette transporter permease protein [Prevotella salivae DSM 15606] Length = 252 Score = 202 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 58/245 (23%), Positives = 106/245 (43%), Gaps = 1/245 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G + A + + F ++M +GV + +V+LISF GAVI Sbjct: 7 LYNYLTTFGSYLILMWRSLAIPDRMRMFFKRYTKEMSQLGVDSIGIVLLISFFIGAVICI 66 Query: 185 QGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + + + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 67 QMKVNIQSPWMPRWVSGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 126 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I L+ +P L I ++ I+GA + + + Sbjct: 127 LDIMGVNSANYLILPKILGLVTMMPFLVIFSSALGILGAYSTAYIGHLLTPDDLTLGIQH 186 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + I+ ++K+ F A I V+ G+ V S +GK T VV S +++ D Sbjct: 187 SFNSWFIWMSILKSMFFAFIIASVSSYFGYTVEGGSVEVGKASTDAVVSSSVLILFSDVF 246 Query: 364 FAIFY 368 Sbjct: 247 LTQLL 251 >gi|254251295|ref|ZP_04944613.1| hypothetical protein BDAG_00477 [Burkholderia dolosa AUO158] gi|124893904|gb|EAY67784.1| hypothetical protein BDAG_00477 [Burkholderia dolosa AUO158] Length = 386 Score = 202 bits (515), Expect = 6e-50, Method: Composition-based stats. Identities = 80/240 (33%), Positives = 131/240 (54%), Gaps = 2/240 (0%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 VI + +Y G +P+ L++F+ G V++ A QL F Sbjct: 148 RVILDALSVLRRPQTMP--WKETSANVYSAGAQALPITALVAFLIGIVLSYLSAQQLQMF 205 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 GA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R MG+ Sbjct: 206 GANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVMGIPHGL 265 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 LI PR+ AL +++PLL + N A+ G ++ I F +AN++ G Sbjct: 266 RLILPRVLALGVAMPLLVMWTNIVALTGGALAAKMVLGIDVNYFVRSLPGVVPIANLYIG 325 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 L K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI + +G+ Sbjct: 326 LGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAILFQNVGL 385 >gi|188997595|ref|YP_001931846.1| protein of unknown function DUF140 [Sulfurihydrogenibium sp. YO3AOP1] gi|188932662|gb|ACD67292.1| protein of unknown function DUF140 [Sulfurihydrogenibium sp. YO3AOP1] Length = 247 Score = 202 bits (515), Expect = 6e-50, Method: Composition-based stats. Identities = 70/245 (28%), Positives = 124/245 (50%), Gaps = 6/245 (2%) Query: 129 AHILGLVISNTGE----FCASSYKFKGF--LLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ++ +I +TG F + FK F + +++ M +GV+ P+++L F TG V+ Sbjct: 1 MGVINSLIEHTGNITIFFLRTLLSFKKFPKIKHILKYMEDIGVNAAPLIVLTGFFTGGVL 60 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + +F AE L+S+ RE+ +L A+++ RSGSAI A IG+M+I E+ID Sbjct: 61 VVETYPTFHKFNAEFLMGALVSLSLARELSPVLVALLVTARSGSAIAANIGTMRITEQID 120 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ M +D +R L++PRI I+ +P LT+L+ S +IG Y I +++ + Sbjct: 121 ALEVMAVDPMRYLVAPRIITAILMVPFLTVLSYTSGVIGGYFTSVYVYGINEYMYWEKLK 180 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L +I GL K+ + + G+ + +G+ TT VV + +++I+D Sbjct: 181 DFTELKDIMGGLYKSAVFGVILVTITAYFGYITKGGAEGVGRSTTTAVVVASVVILILDY 240 Query: 363 LFAIF 367 Sbjct: 241 FLTAL 245 >gi|206890031|ref|YP_002249467.1| toluene tolerance protein Ttg2B [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741969|gb|ACI21026.1| toluene tolerance protein Ttg2B [Thermodesulfovibrio yellowstonii DSM 11347] Length = 258 Score = 202 bits (515), Expect = 6e-50, Method: Composition-based stats. Identities = 64/231 (27%), Positives = 115/231 (49%), Gaps = 1/231 (0%) Query: 143 CASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDL 202 ++ + ++ QM Y G S V +V L+ G ++ Q + +LS G ++++ + Sbjct: 25 IIRLFRKPLYFDDIVEQMEYAGSSSVFIVSLVCLFVGMALSLQLSAELSGLGLKMYTGKI 84 Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 + I +REIG L+TA++ GR G+ AEIGSM + +ID +R G+D ++ ++ PR+ A Sbjct: 85 VGIAVIREIGPLVTALVFIGRVGAGQTAEIGSMILGHQIDTLRVYGIDPIKKVVVPRVVA 144 Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322 ++ LP LTI+ + + G + + + ++S T N+ +G IK Sbjct: 145 SVVMLPCLTIIGDLVCLFGGYYIAVFVSNQSGSFYWSSIIKELTFQNVLSGSIKPFIFGY 204 Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-IFYFAIG 372 I ++ G + L T VV SI +VI +D + I +A+G Sbjct: 205 LISCISCFYGLTTRGGAKGLRTSTTKAVVTSIVVVIAMDFVLTRILLYALG 255 >gi|95928284|ref|ZP_01311032.1| protein of unknown function DUF140 [Desulfuromonas acetoxidans DSM 684] gi|95135555|gb|EAT17206.1| protein of unknown function DUF140 [Desulfuromonas acetoxidans DSM 684] Length = 261 Score = 202 bits (515), Expect = 7e-50, Method: Composition-based stats. Identities = 68/267 (25%), Positives = 135/267 (50%), Gaps = 13/267 (4%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 +G + F+ + L + + YK K ++RQ++++G + + Sbjct: 2 RFVALLGHHTLHFLETAGRFGMFL---LVSVYSMIKPPYKVKP----IVRQIHFIGANSL 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 V++ TG V+ QG + L++FG+ F +++ +RE+G +L A+M+ GR+GSAI Sbjct: 55 FVILFTGLFTGMVLGLQGYYTLAKFGSVGFLGGAVALSLIRELGPVLAALMVIGRAGSAI 114 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AE+G M+ +E+IDA+ M +D + LI P++ A +I++PLLT + + I G ++ + Sbjct: 115 CAEVGIMRNSEQIDALECMAIDPISYLIVPKLVAGLIAMPLLTAIFDVIGIFGGFMIGVQ 174 Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV------GVHSNSL 342 +D+ +F +S+ +I GL+K+ + + +GF + G + + Sbjct: 175 LFDVSAGSYFQGMYSSVVWLDIEMGLVKSLVFGLLLVWICAAKGFYLHLERGGGFGAEGV 234 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYF 369 + T+ VV + V++ D L + Sbjct: 235 SRTTTSAVVLASVSVLVWDYLISAILL 261 >gi|297191126|ref|ZP_06908524.1| ABC transporter integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] gi|197721750|gb|EDY65658.1| ABC transporter integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] Length = 256 Score = 202 bits (514), Expect = 7e-50, Method: Composition-based stats. Identities = 65/239 (27%), Positives = 112/239 (46%) Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G + + + + K + I+Q ++V + L+S GAVIA Q Q Sbjct: 13 GSLFAMGLDVLRTIPKRPFQVREFIQQAWFVASVTILPTALVSIPFGAVIALQIGSLTRQ 72 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 GA+ FS + LRE ++TA++IAG G+AI A++G+ KI EEIDA+R +G+D + Sbjct: 73 LGAQSFSGAASVLAVLREASPIVTALLIAGAGGTAICADLGARKIREEIDAMRVLGIDPI 132 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 L+ PR+ A ++ LL L + + G + + + F + A L++++ Sbjct: 133 HRLVVPRVLATMLVAVLLNGLVSVVGVAGGYFFNVVLQNGTPGAYLASFTTLAQLSDLWA 192 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +KA IVA +G +G V VV + ++ + + + YF I Sbjct: 193 AELKALVFGAIAAIVASYKGLTAKGGPKGVGDAVNQSVVITFMLLFVTNFVMTAVYFQI 251 >gi|113954700|ref|YP_731394.1| transporter membrane component [Synechococcus sp. CC9311] gi|113882051|gb|ABI47009.1| possible transporter, membrane component [Synechococcus sp. CC9311] Length = 248 Score = 202 bits (514), Expect = 7e-50, Method: Composition-based stats. Identities = 69/242 (28%), Positives = 115/242 (47%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 + LG + G+ +++ K + + L Q+ G +VI+ + G V Q Sbjct: 7 LNRLGSSLLIGGQAVSATTKGRINTIDLFDQLQEAGPGSFLIVIITALAAGTVFNIQITA 66 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 +L+ GA +++I REI LLTA ++ G+ +A A++G+MK+ E+IDAI + Sbjct: 67 ELNSMGAGSTVGGVLAIGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLR 126 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 D V L+ PR+ A+++ P+ +L AI A I Y IP AVF++ + T Sbjct: 127 TDPVEYLVVPRLIAMVVMAPVQCLLFFGVAIWSAQISSTNLYSIPPAVFWTAVRTWLTPD 186 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 ++ LIKA IG++A G + +G T VV + V ++D L Sbjct: 187 DLPFMLIKALVFGLQIGVIACGWGMTTKGGAKEVGTSTTGAVVMILVSVALMDVLLTQIL 246 Query: 369 FA 370 F Sbjct: 247 FG 248 >gi|325268715|ref|ZP_08135344.1| ABC superfamily ATP binding cassette transporter permease protein [Prevotella multiformis DSM 16608] gi|324988959|gb|EGC20913.1| ABC superfamily ATP binding cassette transporter permease protein [Prevotella multiformis DSM 16608] Length = 248 Score = 202 bits (514), Expect = 7e-50, Method: Composition-based stats. Identities = 60/241 (24%), Positives = 110/241 (45%), Gaps = 1/241 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 + G + G + + + FL +++M +GV + +V+LISF GAVI Q Sbjct: 7 LNTFGNYLILMGRSFSRPERMRMFLKRYVKEMSQLGVDSIGIVLLISFFIGAVICIQIKL 66 Query: 189 QLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + + ++ + L E + ++++G+ GS I +E+G+M++ ++IDA+ M Sbjct: 67 NVQSPWMPHWVSGYVTREIMLLEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALEIM 126 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ LI P++ LI +P L I + + IIGA + + I + Sbjct: 127 GINSASYLILPKMLGLITIMPFLVIFSAATGIIGAYATAYIGHIITPIDLTAGLQHDFNA 186 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ +IK F A I V+ G+ V S +GK T VV S +++ D Sbjct: 187 WFMWMSIIKGFFFAFIISSVSSYMGYTVKGGSVEVGKASTDAVVCSSVLILFSDVFLTQI 246 Query: 368 Y 368 Sbjct: 247 L 247 >gi|330991860|ref|ZP_08315809.1| putative ABC transporter permease protein [Gluconacetobacter sp. SXCC-1] gi|329760881|gb|EGG77376.1| putative ABC transporter permease protein [Gluconacetobacter sp. SXCC-1] Length = 382 Score = 202 bits (514), Expect = 8e-50, Method: Composition-based stats. Identities = 79/374 (21%), Positives = 156/374 (41%), Gaps = 14/374 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61 E T+ +GNW + E I + + + D + DT + Sbjct: 20 EANRTLVTLSGNWIAQE-GRIPAFPETGLKDVPRGAALEFDTGRLGRWDTSLISFLWELK 78 Query: 62 --MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 + H + + + +L L+ + + +G+ + Sbjct: 79 RSAREAHVDVHIDTLPESAHKLLDLLPEIPPEPAPPTPHHFAP--------VAAVGQFTL 130 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 +N+ + + + + L+ + G + + +V +++F+ G Sbjct: 131 DTLNEIGCVSEMGAAAARGGIAALVGRGMMRT--VDLMSDLAAAGPAALLIVGVVNFLVG 188 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 A++A G+ +L +F A+I+ L++I +RE+ ++TA+++AGR+G A A I +M+ NE Sbjct: 189 AILAFVGSVELHKFAADIYVASLVAIAMVREMSAVMTAIIMAGRTGGAYAARISTMQANE 248 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDA++ G+ LI P + AL ++PLL + ++G +V + + +F Sbjct: 249 EIDALQVFGIPVASYLILPSVLALGFTMPLLYLYGCLIGMLGGFVVSFIMLHVSPLGYFH 308 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 L G IK+ +G+ + + G G + +G T VV I VI Sbjct: 309 ETLQALPLDQFTFGFIKSLVFGTFVGLTSCRIGLKAGRSAADVGIAATKAVVVGIVGVIA 368 Query: 360 IDSLFAIFYFAIGI 373 +D++FA+ IGI Sbjct: 369 LDAVFAVIANVIGI 382 >gi|196231158|ref|ZP_03130018.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428] gi|196224988|gb|EDY19498.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428] Length = 264 Score = 202 bits (514), Expect = 8e-50, Method: Composition-based stats. Identities = 74/255 (29%), Positives = 129/255 (50%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + S A +L + G+ + Q GV VP+V L+SF Sbjct: 7 AVRSALQHVSSIAWLLIYTVQEMGDHMLRRRRLPFRPSIFFEQADRTGVGSVPLVALVSF 66 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G +A L+ +G E ++I RE+G L+T +M+A R G+A AE+G+M Sbjct: 67 FLGLTMALLTGHVLAPYGQETLVPAAVAIGFTRELGPLITGIMVAARVGAAFTAELGTMV 126 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 + EE++AI MGL +R+L+SPR+ A + +P L++++N A+ G +++ +DIP Sbjct: 127 VAEEVEAIEAMGLGPLRLLVSPRVLAAFLLMPCLSVVSNMMALSGGALISRWAFDIPMQG 186 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 F+ + +I G++K+ IG++A +G V + +G T+ VV +I+ Sbjct: 187 FWQSSLENLFIRDIVAGVLKSFLFGLLIGLIACYKGLTVRGGAAGVGTATTSSVVTAITT 246 Query: 357 VIIIDSLFAIFYFAI 371 VI D++F I A+ Sbjct: 247 VIGFDTVFNIVLVAL 261 >gi|171058394|ref|YP_001790743.1| hypothetical protein Lcho_1711 [Leptothrix cholodnii SP-6] gi|170775839|gb|ACB33978.1| protein of unknown function DUF140 [Leptothrix cholodnii SP-6] Length = 369 Score = 202 bits (514), Expect = 8e-50, Method: Composition-based stats. Identities = 82/374 (21%), Positives = 153/374 (40%), Gaps = 20/374 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + G+W D + VD A+ D A + Sbjct: 12 QDGAGWTLILRGDW-------CGDAGTRLTPPPAAARQVSVDARALGAWDGGLAAALHQC 64 Query: 62 MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + H + ++LQ + + + L R + IG ++ Sbjct: 65 LAPLHQRAVPLQLQDLPPGVRSVLELALSVVRVSAPERAAAPVG--------VAAIGHRL 116 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + + A G V+ G +G + L RQ+ G VP+V L F+ Sbjct: 117 AISWVECMATAAFFGEVLIALGRLLRGRSDLQG--VDLWRQVDQAGPLSVPIVSLTCFLV 174 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G ++A G QL + GA F D++++ +RE+ L+T V++AGR G+A A+IGSM+ Sbjct: 175 GLMLAYMGGAQLHRIGAPSFIPDVVTVGMVRELAGLMTGVILAGRLGAAFAAQIGSMQAG 234 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+R +G+D + L+ PR+ AL++ P+L + ++ Y + + Sbjct: 235 EEIDALRALGVDPIGYLVLPRLLALLLVAPMLVAIGMLVGVLAGLPAAVAAYGLSPTEYL 294 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + + T +++ GL K + + +EG G + ++G TT VV+++ ++ Sbjct: 295 HKSAAALTWTHLWIGLFKGMMYLGLVALAGCREGLRAGRDAQAVGAATTTAVVKALVWIV 354 Query: 359 IIDSLFAIFYFAIG 372 + ++G Sbjct: 355 AAACGSTVVLQSLG 368 >gi|90408209|ref|ZP_01216376.1| hypothetical protein PCNPT3_11414 [Psychromonas sp. CNPT3] gi|90310655|gb|EAS38773.1| hypothetical protein PCNPT3_11414 [Psychromonas sp. CNPT3] Length = 259 Score = 202 bits (514), Expect = 8e-50, Method: Composition-based stats. Identities = 68/256 (26%), Positives = 137/256 (53%), Gaps = 4/256 (1%) Query: 118 IVKFINDSCSQAHILGL-VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + +S + + G + T C + K I Q++ +G+ +P+++ Sbjct: 6 VSAVGRESLALIQVSGRACLLLTRTLCVKPH--KKLFSLFIVQIFQLGILSLPIILTAGL 63 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V++ QG + L + AE ++++ LRE+G +++A++ AGR+GSA+ AEIG M+ Sbjct: 64 FIGMVLSLQGYYVLVAYAAEENLGSMVALSLLRELGPVVSALLFAGRAGSALTAEIGLMQ 123 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ MG+ ++ +++PR+ A +I+LP+LT+L N AI G ++ + I Sbjct: 124 STEQLASMEMMGVSPLKRVLAPRLLAGVITLPMLTLLFNVFAIWGGYLIGVHWMGIDAGS 183 Query: 297 FFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S + +++ G+IK+ A I VA+ G+ V ++ + + TT VV S Sbjct: 184 FWSVMQGSVDLFSDVGNGIIKSVIFALIITWVALYNGYYVIPNAQGISRSTTTTVVVSSL 243 Query: 356 IVIIIDSLFAIFYFAI 371 +++ +D + +F F + Sbjct: 244 LILAMDFILTVFMFGM 259 >gi|325915573|ref|ZP_08177883.1| hypothetical integral membrane protein [Xanthomonas vesicatoria ATCC 35937] gi|325538211|gb|EGD09897.1| hypothetical integral membrane protein [Xanthomonas vesicatoria ATCC 35937] Length = 249 Score = 202 bits (514), Expect = 9e-50, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + S + F+ L+R++Y VG +P++ + G V+ Sbjct: 3 FVESIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ +GA L+ + RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ Sbjct: 63 QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D V ++PR WA ++++PLLT + AI G I F+S ++ Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVHVLGIDNGTFWSGLSNS 182 Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++K+ +VA GF T VV + +V++ + + Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSIATTRAVVNASLLVLMFNFV 242 Query: 364 FAIFYF 369 + F Sbjct: 243 LSAMLF 248 >gi|297172194|gb|ADI23174.1| ABC-type transport system involved in resistance to organic solvents, permease component [uncultured gamma proteobacterium HF0770_11A05] Length = 220 Score = 202 bits (514), Expect = 9e-50, Method: Composition-based stats. Identities = 64/215 (29%), Positives = 112/215 (52%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + Q++++GV VV+L TG V+ Q Q + + + + ++ RE+G + T Sbjct: 1 MEQLHFIGVKSQSVVLLTGAFTGMVMCAQFYIQFHKVKMDSAVMSVXTVXMXRELGAVXT 60 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 +MIAGR G+A+ A++G+MK+ E+IDA+RT+ V L++PR+ A++ISLPLLT A Sbjct: 61 XLMIAGRVGAAMAAQLGTMKVTEQIDALRTLATSPVDYLVAPRLLAMLISLPLLTAEAIA 120 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 +++ +V + +S +I+ GLIKA A I VA +G G Sbjct: 121 ISMVSGMLVAVYLLGLDPVFLWSNMVFYTGSVDIWMGLIKAFIFAGIIATVACHKGMHCG 180 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 + +GK T VV + +++ + + + Sbjct: 181 QGAEGVGKATTEAVVAASISILVSNFFVTLVLNNL 215 >gi|87123683|ref|ZP_01079533.1| possible transporter, membrane component [Synechococcus sp. RS9917] gi|86168252|gb|EAQ69509.1| possible transporter, membrane component [Synechococcus sp. RS9917] Length = 248 Score = 202 bits (514), Expect = 9e-50, Method: Composition-based stats. Identities = 65/239 (27%), Positives = 113/239 (47%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + G+ A++ + + + L Q+ G +VI+ G+V Q A +LS Sbjct: 10 LGSSLLIGGQAVAATARGRINTIDLFDQLLEAGPGSFLIVIITGIAAGSVFNIQVAAELS 69 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + GA ++++ REI LLTA ++ G+ +A A++G+MK+ E+IDAI + D Sbjct: 70 RQGAGSTVGGILALGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTDP 129 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A+++ P+ +L AI I + Y IP +VF++ + ++ Sbjct: 130 VEYLVVPRLIAMVVMAPVQCLLFFGVAIWSGQITSTELYSIPPSVFWTSVRTWMQPDDLP 189 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 LIKA I +++ G +G T VV + V ++D L F Sbjct: 190 FMLIKALVFGLQIAVLSCGWGLTTEGGPKEVGTSTTGSVVMILVTVALMDVLLTQILFG 248 >gi|42525130|ref|NP_970510.1| ABC-type organic solvent resistance transport system, permease protein [Bdellovibrio bacteriovorus HD100] gi|39577341|emb|CAE81164.1| ABC-type organic solvent resistance transport system, permease protein [Bdellovibrio bacteriovorus HD100] Length = 239 Score = 202 bits (513), Expect = 9e-50, Method: Composition-based stats. Identities = 56/242 (23%), Positives = 114/242 (47%), Gaps = 5/242 (2%) Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190 ++ L+ ++ K F +Q+++VG + +V+ V + +F + Sbjct: 1 MITLIAETLTGVFTPPFRRKEFF----QQLHFVGNKSLFIVVFCVCFAAIVTILESSFHM 56 Query: 191 SQFGA-EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 + ++L LRE+G ++TA++++ R G+ +E+GSM+I E++DA++ +G+ Sbjct: 57 KMVIQNDSMVPGFAAVLILRELGAIVTALLLSSRVGAGYASEVGSMQITEQVDALKMLGI 116 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 D V L+ PR A ++ ++T++AN + I A V Y +F + + Sbjct: 117 DPVNYLVVPRFLACVLGAMMITVVANMACIFSAMAVSQFYLGYTPGMFLTSMQRFVDFKD 176 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +IK I +VA GF + +G+ T VV S +I+ID + + + Sbjct: 177 LIFAMIKGACFGGVIPLVACYFGFRCQQGAEGVGRATTNTVVVSSIAIIVIDFILSYTFS 236 Query: 370 AI 371 + Sbjct: 237 YL 238 >gi|150003041|ref|YP_001297785.1| hypothetical protein BVU_0448 [Bacteroides vulgatus ATCC 8482] gi|254883679|ref|ZP_05256389.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|294775665|ref|ZP_06741173.1| putative membrane protein [Bacteroides vulgatus PC510] gi|149931465|gb|ABR38163.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] gi|254836472|gb|EET16781.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|294450509|gb|EFG19001.1| putative membrane protein [Bacteroides vulgatus PC510] Length = 255 Score = 202 bits (513), Expect = 9e-50, Method: Composition-based stats. Identities = 65/243 (26%), Positives = 110/243 (45%), Gaps = 1/243 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G I G A + F + +M +GV+ + +V+LISF GAVI Q Sbjct: 13 ITTVGKYIMLMGRTFARPERMHMFFKQYLNEMVQLGVNSIGIVLLISFFIGAVITIQIKL 72 Query: 189 QLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + F + + + L E + ++++G+ GS I +EIG+M++ ++IDA+ M Sbjct: 73 NIESPWMPRFVVGYTTREIMLLEFSSSIMCLILSGKVGSNIASEIGTMRVTQQIDALEIM 132 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ LI P+I AL+ +P L I + S IIGA W + + Sbjct: 133 GVNSAGYLILPKIIALMTMIPFLVIFSISSGIIGAFCTCWFGGVMNAEDLAYGLQYSFQE 192 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ IK+ F A I V+ G+ V S ++GK T VV S +++ D + Sbjct: 193 WFVWCSFIKSIFFAFIISSVSAYFGYTVEGGSIAVGKASTDSVVMSSVLILFSDLVLTQL 252 Query: 368 YFA 370 Sbjct: 253 LMG 255 >gi|318042383|ref|ZP_07974339.1| putative transporter, membrane component [Synechococcus sp. CB0101] Length = 261 Score = 202 bits (513), Expect = 9e-50, Method: Composition-based stats. Identities = 59/239 (24%), Positives = 109/239 (45%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG G+ A+ K + + L+ ++ G +VI+ G V Q A +L Sbjct: 22 LGESCLIGGQAMAALAKGQVGINDLMAELMEAGPGSFLIVIITGLAAGTVFNIQAASELV 81 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + GA ++++ REI +LTA ++ G+ +A A++G+MK+ E+IDAI + D Sbjct: 82 KQGAGSTVGGILALGLAREIAPILTATLVTGKVATAYAAQLGTMKVTEQIDAITMLRTDP 141 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V+ L+ PR+ A++I P+ + A+ + Y IP VF++ + +++ Sbjct: 142 VQYLVVPRVLAMLIMTPVQCLAFFAVAMWSGQVSSTLLYQIPPGVFWNSVRTWMEPSDLP 201 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 L+KA I +++ G +G T VV + V ++D + F Sbjct: 202 AMLLKAVVFGLQIAVISCGWGLTTRGGPKEVGTSTTGAVVMILVTVSLMDVVLTQLLFG 260 >gi|21245052|ref|NP_644634.1| toluene tolerance protein [Xanthomonas axonopodis pv. citri str. 306] gi|294627465|ref|ZP_06706049.1| toluene tolerance protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294664971|ref|ZP_06730282.1| toluene tolerance protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|21110783|gb|AAM39170.1| toluene tolerance protein [Xanthomonas axonopodis pv. citri str. 306] gi|292598286|gb|EFF42439.1| toluene tolerance protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292605249|gb|EFF48589.1| toluene tolerance protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 249 Score = 202 bits (513), Expect = 9e-50, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + S + F+ L+R++Y VG +P++ + G V+ Sbjct: 3 FADSIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ +GA L+ + RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ Sbjct: 63 QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D V ++PR WA ++++PLLT + AI G I F+S ++ Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVHVLGIDNGTFWSGLSNS 182 Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++K+ +VA GF T VV + +V++ + + Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242 Query: 364 FAIFYF 369 + F Sbjct: 243 LSAMLF 248 >gi|34540774|ref|NP_905253.1| hypothetical protein PG1033 [Porphyromonas gingivalis W83] gi|34397088|gb|AAQ66152.1| conserved hypothetical protein [Porphyromonas gingivalis W83] Length = 248 Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats. Identities = 63/235 (26%), Positives = 119/235 (50%), Gaps = 1/235 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +G + +++ LI+++ +GV V +VI+ISF GAVI Q + Sbjct: 5 TLQQIGEYTKLMQRTFSLPNRWRMSFRELIKEIDKLGVDSVWIVIIISFFIGAVITIQLS 64 Query: 188 FQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 ++ F+I + + L E + +++AG+ GS+I +E+G+M++ E+IDA+ Sbjct: 65 LNMTSPLIPRFTIGYSTREIILLEFSSTVMCLILAGKVGSSIASELGTMRVTEQIDAMEV 124 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG++ LI P+I ++ +P+L+I++ + I+G + ++P + F + Sbjct: 125 MGVNSANYLILPKIIGFMLFVPVLSIISMSTGIVGGYLACSLVPNLPRSDFEYGLQLFFS 184 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 N+F +IK+ A I VA G+ V + +GK T VVQ +V++ D Sbjct: 185 PYNVFYSIIKSVAYAFIISSVAGYYGYTVKGGALQVGKASTNAVVQCSILVLVAD 239 >gi|325922508|ref|ZP_08184271.1| conserved hypothetical integral membrane protein [Xanthomonas gardneri ATCC 19865] gi|325924178|ref|ZP_08185738.1| conserved hypothetical integral membrane protein [Xanthomonas gardneri ATCC 19865] gi|325545309|gb|EGD16603.1| conserved hypothetical integral membrane protein [Xanthomonas gardneri ATCC 19865] gi|325547016|gb|EGD18107.1| conserved hypothetical integral membrane protein [Xanthomonas gardneri ATCC 19865] Length = 249 Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats. Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + S + F+ L+R++Y VG +P++ + G V+ Sbjct: 3 MVESIRAFGRAGLFSLTVLRGSVPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ +GA L+ + RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ Sbjct: 63 QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D + ++PR WA ++++PLLT + AI G I F+S ++ Sbjct: 123 ELMAIDPIAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVHVLGIDNGTFWSGLSNS 182 Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++K+ +VA GF T VV + +V++ + + Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSIATTRAVVNASLLVLMFNFV 242 Query: 364 FAIFYF 369 + F Sbjct: 243 LSAMLF 248 >gi|29832444|ref|NP_827078.1| ABC transporter integral membrane protein [Streptomyces avermitilis MA-4680] gi|29609563|dbj|BAC73613.1| putative ABC transporter permease protein [Streptomyces avermitilis MA-4680] Length = 256 Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats. Identities = 62/239 (25%), Positives = 110/239 (46%) Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G + + + + + I+Q ++V + L+S GAVIA Q Q Sbjct: 13 GSLFAMALDVVRTIPRRPFQAREFIQQAWFVASVTILPTALVSIPFGAVIALQIGSLTRQ 72 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 GA+ FS + LRE ++TA++IAG G+AI A++G+ KI EEIDA++ +G+D + Sbjct: 73 LGAQSFSGAASVLAVLREASPIVTALLIAGAGGTAICADLGARKIREEIDAMQVLGIDPI 132 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 L+ PR+ A ++ LL L + + G + + + F + A L++++ Sbjct: 133 HRLVVPRVLASMVVAVLLNGLVSVVGVAGGYFFNVVLQNGTPGAYLASFTTLAQLSDLWA 192 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 KA IVA +G +G V VV + ++ + + + YF + Sbjct: 193 AEAKALVFGAIAAIVASYKGLTAKGGPKGVGDAVNQSVVITFMLLFVTNFVMTAVYFQV 251 >gi|282866015|ref|ZP_06275063.1| protein of unknown function DUF140 [Streptomyces sp. ACTE] gi|282559054|gb|EFB64608.1| protein of unknown function DUF140 [Streptomyces sp. ACTE] Length = 283 Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats. Identities = 62/247 (25%), Positives = 106/247 (42%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G + + + +K + Q ++V + L+S GAVIA Sbjct: 31 LLAPLRQTGQLFALALAVARAVFKRPFQFREFVEQFWFVASVTILPAALVSIPFGAVIAL 90 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q GA+ F+ + +++ L+ A++IAG +GSAI A++GS KI EE+DA+ Sbjct: 91 QVGSLTEQLGAQSFTGGASVLAVIQQASPLIVALLIAGAAGSAICADLGSRKIREELDAM 150 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ V+ L+ PR+ A + LL L + +G + + F + Sbjct: 151 EVMGVSPVQRLVVPRVLATMGVAVLLNGLVSVVGTLGGYFFNVIMQGGTPGAYLASFSAL 210 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A L +++ G +KA GIVA G +G V VV + ++ ++ Sbjct: 211 AQLPDLYIGELKALIFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFAVNMAL 270 Query: 365 AIFYFAI 371 Y I Sbjct: 271 TAIYLQI 277 >gi|166710003|ref|ZP_02241210.1| ABC transporter permease [Xanthomonas oryzae pv. oryzicola BLS256] Length = 249 Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 110/246 (44%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + S + F+ L+R++Y VG +P++ + G V+ Sbjct: 3 FVDSIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ +GA L+ + RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ Sbjct: 63 QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D V ++PR WA ++++PLLT + AI G I F+S ++ Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVHVLGIDNGTFWSGLSNS 182 Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + + ++K+ +VA GF T VV + +V++ + + Sbjct: 183 VDVWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242 Query: 364 FAIFYF 369 + F Sbjct: 243 LSAMLF 248 >gi|186472351|ref|YP_001859693.1| hypothetical protein Bphy_3498 [Burkholderia phymatum STM815] gi|184194683|gb|ACC72647.1| protein of unknown function DUF140 [Burkholderia phymatum STM815] Length = 382 Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats. Identities = 81/367 (22%), Positives = 160/367 (43%), Gaps = 6/367 (1%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66 V G+W + + V I K++ + + ++ S + D+ +M E Sbjct: 21 VLHLRGDWITCATGVRSAAEVHEIVKAVGACALRLETSNLGRWDSALIVFLMMLRESVRK 80 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 G + + + + + ++L +G+ + ++ Sbjct: 81 GGTRPFEIDESDLPHAAQRLLALAAAGSG---EVAGIAAVHRSLATQVGEAYFQAWANAV 137 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 S ++G + A + +G + +++ M G + +V +++ + GA++A G Sbjct: 138 SIVALVGETALHCTAAFAHRVRTRG--VDVLQLMREAGAGALAIVAIVNGLVGAILAFIG 195 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A Q +FGA I+ +L+ I +RE+ L TA+++AGR+G A A + +M+ NEEIDA+ Sbjct: 196 AVQFQRFGAGIYVANLVGIAVVREMAALATAIVMAGRTGGAYAAHLATMQGNEEIDALNA 255 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +G+ L+ PR+ AL+ +PLL + + ++ IV DI + + Sbjct: 256 VGIPVFDFLVLPRVIALVSMMPLLYVYSCAVGLLSGFIVTLATLDITAVTYLQQLRGAVD 315 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 GL K+ + + G G + +G+ T+ VV I VI +D++FA+ Sbjct: 316 GVQFAIGLAKSIAFGSFVALAGCHIGLKAGRSAAEVGRAATSAVVVGIVGVISLDAIFAV 375 Query: 367 FYFAIGI 373 A+GI Sbjct: 376 CTNALGI 382 >gi|58579932|ref|YP_198948.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84621937|ref|YP_449309.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|58424526|gb|AAW73563.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae KACC10331] gi|84365877|dbj|BAE67035.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 249 Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 111/246 (45%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + S + F+ L+R++Y VG +P++ + G V+ Sbjct: 3 FVDSIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ +GA L+ + RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ Sbjct: 63 QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D V ++PR WA ++++PLLT + AI G + I F+S ++ Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYVEAVHVLGIDNGTFWSGLSNS 182 Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + + ++K+ +VA GF T VV + +V++ + + Sbjct: 183 VDVWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242 Query: 364 FAIFYF 369 + F Sbjct: 243 LSAMLF 248 >gi|21233625|ref|NP_639542.1| toluene tolerance protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770590|ref|YP_245352.1| toluene tolerance protein [Xanthomonas campestris pv. campestris str. 8004] gi|21115493|gb|AAM43424.1| toluene tolerance protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575922|gb|AAY51332.1| toluene tolerance protein [Xanthomonas campestris pv. campestris str. 8004] Length = 249 Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats. Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + S + F+ L+R++Y VG +P++ + G V+ Sbjct: 3 IAESIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ +GA L+ + RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ Sbjct: 63 QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D + ++PR WA ++++PLLT + AI G I F+S ++ Sbjct: 123 ELMAIDPIAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVHVLGIDNGTFWSGLSNS 182 Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++K+ +VA GF T VV + +V++ + + Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSIATTRAVVNASLLVLMFNFV 242 Query: 364 FAIFYF 369 + F Sbjct: 243 LSAMLF 248 >gi|319642184|ref|ZP_07996844.1| hypothetical protein HMPREF9011_02444 [Bacteroides sp. 3_1_40A] gi|317386170|gb|EFV67089.1| hypothetical protein HMPREF9011_02444 [Bacteroides sp. 3_1_40A] Length = 251 Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats. Identities = 65/243 (26%), Positives = 110/243 (45%), Gaps = 1/243 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G I G A + F + +M +GV+ + +V+LISF GAVI Q Sbjct: 9 ITTVGKYIMLMGRTFARPERMHMFFKQYLNEMVQLGVNSIGIVLLISFFIGAVITIQIKL 68 Query: 189 QLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + F + + + L E + ++++G+ GS I +EIG+M++ ++IDA+ M Sbjct: 69 NIESPWMPRFVVGYTTREIMLLEFSSSIMCLILSGKVGSNIASEIGTMRVTQQIDALEIM 128 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ LI P+I AL+ +P L I + S IIGA W + + Sbjct: 129 GVNSAGYLILPKIIALMTMIPFLVIFSISSGIIGAFCTCWFGGVMNAEDLAYGLQYSFQE 188 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ IK+ F A I V+ G+ V S ++GK T VV S +++ D + Sbjct: 189 WFVWCSFIKSIFFAFIISSVSAYFGYTVEGGSIAVGKASTDSVVMSSVLILFSDLVLTQL 248 Query: 368 YFA 370 Sbjct: 249 LMG 251 >gi|289662322|ref|ZP_06483903.1| toluene tolerance protein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 249 Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + S + F+ L+R++Y VG +P++ + G V+ Sbjct: 3 FADSIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ +GA L+ + RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ Sbjct: 63 QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D V ++PR WA ++++PLLT + AI G I F+S ++ Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVYVLGIDNGTFWSGLSNS 182 Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++K+ +VA GF T VV + +V++ + + Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSIATTRAVVNASLLVLMFNFV 242 Query: 364 FAIFYF 369 + F Sbjct: 243 LSAMLF 248 >gi|86137545|ref|ZP_01056122.1| membrane protein [Roseobacter sp. MED193] gi|85825880|gb|EAQ46078.1| membrane protein [Roseobacter sp. MED193] Length = 260 Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 115/254 (45%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + + + ++G V T A + + L + +G +PVV L + Sbjct: 7 LARLGRSTLAALAMIGRVALFTVSAFAHMLRPPYYPRELALSLLQIGWLSLPVVALTAVF 66 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG +A Q ++F AE +++I +RE+G +L +MIA R S+I AEI +MK+ Sbjct: 67 TGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKV 126 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+ T+ + ++ L++PR+ A ++++P+L + + I G V A + Sbjct: 127 TEQIDALVTLSTNPMQYLVAPRVLAALLTVPVLVGIGDIIGIAGGYTVSVHNLGFNSAAY 186 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 ++ + L+K F + G G + +G + V + ++ Sbjct: 187 LKNTVDFLEPLDLISSLVKGAFFGVIAATMGCYYGMQSGRGAQGVGSATKSSVEAAAVLI 246 Query: 358 IIIDSLFAIFYFAI 371 + + + +F++ Sbjct: 247 LATNFILTGVFFSL 260 >gi|239945573|ref|ZP_04697510.1| putative YrbE family protein [Streptomyces roseosporus NRRL 15998] gi|239992040|ref|ZP_04712704.1| putative YrbE family protein [Streptomyces roseosporus NRRL 11379] Length = 293 Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 4/256 (1%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 ++ + + + L ++ ++ + F I Q ++V + L+S Sbjct: 36 RRPSRLLAPLRETGKLFALAVAVARAIFRRPFQVREF----IEQFWFVASVTILPAALVS 91 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 GAVIA Q Q GA+ F+ + +++ L+ A++I+G +GSAI A++GS Sbjct: 92 IPFGAVIALQVGSLTQQLGAQSFTGGASVLAVIQQASPLIVALLISGAAGSAICADLGSR 151 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 KI EE+DA+ MG+ ++ L+ PR+ A ++ LL L + +G D Sbjct: 152 KIREELDAMEVMGVSPIQRLVVPRVLATMLVAVLLNGLISVVGTLGGYFFNVIMQDGTPG 211 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + + F + A L +++ KA GIVA G +G V VV + Sbjct: 212 AYLASFSALAQLPDLYISEFKALIFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFM 271 Query: 356 IVIIIDSLFAIFYFAI 371 ++ ++ + Y I Sbjct: 272 LLFFVNMVLTAIYLQI 287 >gi|258647414|ref|ZP_05734883.1| ABC transporter, permease [Prevotella tannerae ATCC 51259] gi|260852782|gb|EEX72651.1| ABC transporter, permease [Prevotella tannerae ATCC 51259] Length = 248 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 61/242 (25%), Positives = 109/242 (45%), Gaps = 1/242 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + G I G +++ F +++M +GV + +V+LISF GAVI Sbjct: 3 ILNFLNSFGRYIELLGRTFQRPERWRMFGKQYLKEMAQLGVDSIGIVLLISFFIGAVICI 62 Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + + ++ + L E + ++++G+ GS I +E+G+M+ ++IDA Sbjct: 63 QIKLNIQSAWMPTWVSGYVTREIMLLEFSSSIMCLILSGKVGSNIASELGTMRTTQQIDA 122 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I L+ +PLL I + S I+GA + + I + Sbjct: 123 LEIMGVNSASFLILPKILGLVTMIPLLVIFSTASGIVGAYATAYIGHIITATDLTAGMQH 182 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + G IK+ F A I V+ G+ V S +GK T VV +++ D Sbjct: 183 DFAPWFFWMGTIKSLFFAFIIASVSSFYGYTVEGGSIEVGKASTNAVVSCSMLILFSDLF 242 Query: 364 FA 365 Sbjct: 243 LT 244 >gi|88607911|ref|YP_504642.1| putative ABC transporter, permease protein [Anaplasma phagocytophilum HZ] gi|88598974|gb|ABD44444.1| putative ABC transporter, permease protein [Anaplasma phagocytophilum HZ] Length = 244 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 62/237 (26%), Positives = 116/237 (48%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G V + S +L +Q + V +P+V + S TG +A Q S Sbjct: 7 VGRVAIFCVKAVFHSLVPPYYLWITTKQFFEVWFFSLPIVAVTSLFTGGALALQDTLVGS 66 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + F ++++ +RE+G +L +++AGR G+A+ AEIG+M+I E+IDA+ T+ D Sbjct: 67 AKVSGNFMAGIVTVAIVRELGPVLLGLIVAGRIGAAVAAEIGTMRITEQIDALTTLDTDP 126 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 LI+PR+ AL++++P+L I A+ + G +V + L ++ Sbjct: 127 FHYLIAPRVIALVLAMPVLMIYADILGVFGGFVVGTLGLGYGQEEYLGGVMEFLLLQDVI 186 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 GL+KA I +V G+ + + +G T V + ++I+++ + +FY Sbjct: 187 EGLVKAVSFGLVISLVGCYNGYHCEIGARGVGTATTKTSVAASMLIILLNYIITVFY 243 >gi|325927586|ref|ZP_08188818.1| putative integral membrane protein [Xanthomonas perforans 91-118] gi|325542051|gb|EGD13561.1| putative integral membrane protein [Xanthomonas perforans 91-118] Length = 249 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 110/246 (44%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + S + F+ L+R++Y VG +P++ + G V+ Sbjct: 3 FADSIRAFGRAGLFSLTVLRGSLPTRDFMAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ +GA L+ + RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ Sbjct: 63 QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D V ++PR WA ++++PLLT + AI G I F+S ++ Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVHVLGIDNGTFWSGLSNS 182 Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + + ++K+ +VA GF T VV + +V++ + + Sbjct: 183 VDVWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242 Query: 364 FAIFYF 369 + F Sbjct: 243 LSAMLF 248 >gi|254392558|ref|ZP_05007736.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] gi|197706223|gb|EDY52035.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] Length = 255 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 64/247 (25%), Positives = 110/247 (44%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 S + H G + T E S ++ L I Q ++V + L+S GAVIA Sbjct: 3 SLASLHETGRFFALTAEIVRSVFRRPFQLREFIEQFWFVASVTILPAALVSIPFGAVIAL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q GA+ F+ + +++ L+ A++IAG GSAI A++GS KI EE+DA+ Sbjct: 63 QVGSLTQQLGAQSFTGGASVLAVIQQASPLIVALLIAGAGGSAICADLGSRKIREELDAM 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ ++ L+ PR+ A ++ LL + + +G D + + F + Sbjct: 123 EVMGVSPIQRLVVPRVLATMLVAFLLNGMISVVGTLGGYFFNVIMQDGTPGAYLASFSAL 182 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A L +++ KA G+VA G +G V VV + ++ ++ + Sbjct: 183 AQLPDLYISEFKALVFGFIAGVVAAHRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMII 242 Query: 365 AIFYFAI 371 Y + Sbjct: 243 TAIYLQV 249 >gi|188993823|ref|YP_001905833.1| putative transporter [Xanthomonas campestris pv. campestris str. B100] gi|167735583|emb|CAP53801.1| putative transporter [Xanthomonas campestris pv. campestris] Length = 249 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + S + F+ L+R++Y VG +P++ + G V+ Sbjct: 3 IAESIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ +GA L+ + RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ Sbjct: 63 QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D V ++PR WA ++++PLLT + AI G I F+S ++ Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVHVLGIDNGTFWSGLSNS 182 Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++K+ +VA GF T VV + +V++ + + Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSIATTRAVVNASLLVLMFNFV 242 Query: 364 FAIFYF 369 + F Sbjct: 243 LSAMLF 248 >gi|78050007|ref|YP_366182.1| ABC transporter permease [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78038437|emb|CAJ26182.1| ABC transporter permease [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 249 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 110/246 (44%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + S + F+ L+R++Y VG +P++ + G V+ Sbjct: 3 FADSIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ +GA L+ + RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ Sbjct: 63 QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D V ++PR WA ++++PLLT + AI G I F+S ++ Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVHVLGIDNGTFWSGLSNS 182 Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + + ++K+ +VA GF T VV + +V++ + + Sbjct: 183 VDVWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242 Query: 364 FAIFYF 369 + F Sbjct: 243 LSAMLF 248 >gi|289667685|ref|ZP_06488760.1| toluene tolerance protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 249 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + S + F+ L+R++Y VG +P++ + G V+ Sbjct: 3 FADSVRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ +GA L+ + RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ Sbjct: 63 QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D V ++PR WA ++++PLLT + AI G I F+S ++ Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVYVLGIDNGTFWSGLSNS 182 Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++K+ +VA GF T VV + +V++ + + Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSIATTRAVVNASLLVLMFNFV 242 Query: 364 FAIFYF 369 + F Sbjct: 243 LSAMLF 248 >gi|148240268|ref|YP_001225655.1| ABC-type transport system, permease component [Synechococcus sp. WH 7803] gi|147848807|emb|CAK24358.1| ABC-type transport system, permease component [Synechococcus sp. WH 7803] Length = 257 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 66/242 (27%), Positives = 113/242 (46%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 + LG + G+ ++ + + + L+ Q+ G +VI+ S G V Q Sbjct: 16 LNRLGSSLIIGGQAVTATARGRINTVDLLDQLQEAGPGSFLIVIITSLAAGTVFNIQVTK 75 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 +LS GA+ ++++ REI LLTA ++ G+ +A A++G+MK+ E+IDAI + Sbjct: 76 ELSSMGADATVGGVLAVGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLR 135 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 D V L+ PR+ A+++ P+ +L AI A I + Y IP VF+ S Sbjct: 136 TDPVEYLVVPRLIAMVVMAPVQCLLFFGVAIWSAQISSTELYAIPPEVFWMSVRSWLLPD 195 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 +I LIKA I +++ G +G T VV + V ++D++ Sbjct: 196 DIPFMLIKALVFGLQIAVLSCGWGMTTQGGPKEVGTSTTGAVVMILVTVALMDTVLTQIL 255 Query: 369 FA 370 F Sbjct: 256 FG 257 >gi|318059765|ref|ZP_07978488.1| ABC-transporter integral membrane protein [Streptomyces sp. SA3_actG] gi|318075809|ref|ZP_07983141.1| ABC-transporter integral membrane protein [Streptomyces sp. SA3_actF] Length = 287 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 62/239 (25%), Positives = 108/239 (45%) Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G + + T E + ++ I Q +++ + L+S GAVIA Q Q Sbjct: 43 GRLFALTLEVLRAIFRRPFQFREFIEQFWFIASVTILPAALVSIPFGAVIALQVGSLTQQ 102 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 GA+ F+ + +++ L+ +++IAG GSAI A++GS KI EE+DA+ MG+ V Sbjct: 103 LGAQSFTGGASVLAVIQQASPLIVSLLIAGAGGSAICADLGSRKIREELDAMEVMGVSPV 162 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 + L+ PR+ A + LL L + +G + + F + A L +++ Sbjct: 163 QRLVVPRVLATMFVALLLNGLVSVVGTLGGYFLNVGLQHGTPGAYLQSFSALAQLPDLYV 222 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 G +KA GIVA G +G V VV + ++++++ Y I Sbjct: 223 GELKALVFGLIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFILLLVVNMAMTAVYLQI 281 >gi|302523371|ref|ZP_07275713.1| ABC-transporter integral membrane protein [Streptomyces sp. SPB78] gi|302432266|gb|EFL04082.1| ABC-transporter integral membrane protein [Streptomyces sp. SPB78] Length = 253 Score = 201 bits (512), Expect = 2e-49, Method: Composition-based stats. Identities = 62/247 (25%), Positives = 108/247 (43%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + + T E + ++ I Q +++ + L+S GAVIA Sbjct: 1 MLGPLRQTGRLFALTLEVLRAIFRRPFQFREFIEQFWFIASVTILPAALVSIPFGAVIAL 60 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q GA+ F+ + +++ L+ +++IAG GSAI A++GS KI EE+DA+ Sbjct: 61 QVGSLTQQLGAQSFTGGASVLAVIQQASPLIVSLLIAGAGGSAICADLGSRKIREELDAM 120 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ V+ L+ PR+ A + LL L + +G + + F + Sbjct: 121 EVMGVSPVQRLVVPRVLATMFVALLLNGLVSVVGTLGGYFLNVGLQHGTPGAYLQSFSAL 180 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A L +++ G +KA GIVA G +G V VV + ++++++ Sbjct: 181 AQLPDLYVGELKALVFGLIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFILLLVVNMAM 240 Query: 365 AIFYFAI 371 Y I Sbjct: 241 TAVYLQI 247 >gi|88807464|ref|ZP_01122976.1| possible transporter, membrane component [Synechococcus sp. WH 7805] gi|88788678|gb|EAR19833.1| possible transporter, membrane component [Synechococcus sp. WH 7805] Length = 257 Score = 201 bits (512), Expect = 2e-49, Method: Composition-based stats. Identities = 66/242 (27%), Positives = 112/242 (46%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 + LG + G+ ++ + + + L+ Q+ G +VI+ S G V Q Sbjct: 16 LNRLGSSLIIGGQAVTATVRGRINTVDLLDQLQEAGPGSFLIVIITSLAAGTVFNIQVTK 75 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 +LS GA ++++ REI LLTA ++ G+ +A A++G+MK+ E+IDAI + Sbjct: 76 ELSSMGASATVGGVLAVGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLR 135 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 D V L+ PR+ A+++ P+ +L AI A + Y IP VF+S S Sbjct: 136 TDPVEYLVVPRLIAMVVMAPVQCLLFFGVAIWSAQWSSTELYMIPPQVFWSSVRSWLMPD 195 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 +I LIKA I +++ G +G T VV + V ++D++ Sbjct: 196 DIPFMLIKALVFGLQIAVLSCGWGMTTAGGPKEVGTSTTGAVVMILVTVALMDTVLTQLL 255 Query: 369 FA 370 F Sbjct: 256 FG 257 >gi|78779806|ref|YP_397918.1| putative transporter, membrane component [Prochlorococcus marinus str. MIT 9312] gi|78713305|gb|ABB50482.1| Protein of unknown function DUF140 [Prochlorococcus marinus str. MIT 9312] Length = 251 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 65/254 (25%), Positives = 114/254 (44%), Gaps = 10/254 (3%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 KF S I G I+ ++ K L Q+ G + +V++ G Sbjct: 5 KFFKRLLSSIMIGGQAINFI-------FRGKISKNDLFEQLMESGPGSLLIVLITGIAAG 57 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V Q A QL+ G L+++ RE+ LLTA ++ G+ +A A++G+MK+ E Sbjct: 58 TVFNIQVASQLTSMGVSSEIGGLLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTE 117 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +IDAI + + ++ L+ PR+ +++I P+ +L A+ I +Y +P VF++ Sbjct: 118 QIDAITMLRTEPIQYLVVPRLLSMVIMSPIQCLLFLSVALWSGQIWSTIFYKVPPIVFWT 177 Query: 300 RFHS---TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 S + T ++ + LIK+ I I+A G +G T VV ++ Sbjct: 178 SVRSGNVSLTSTDLTSMLIKSVVFGLIISIIACGYGLTTKGGPKEVGTSTTGAVVMTLVT 237 Query: 357 VIIIDSLFAIFYFA 370 V ++D L F Sbjct: 238 VSLMDVLLTQILFG 251 >gi|302551013|ref|ZP_07303355.1| ABC transporter integral membrane protein [Streptomyces viridochromogenes DSM 40736] gi|302468631|gb|EFL31724.1| ABC transporter integral membrane protein [Streptomyces viridochromogenes DSM 40736] Length = 256 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 63/239 (26%), Positives = 112/239 (46%) Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G + + + + + I+Q ++V + L+S GAVIA Q Q Sbjct: 13 GSLFAMALDVVRTIPRRPFQAREFIQQAWFVASVTIMPTALVSIPFGAVIALQIGSLTRQ 72 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 GA+ FS + LRE ++TA++IAG G+AI A++G+ KI +EIDA++ +G+D V Sbjct: 73 LGAQSFSGAASVLAVLREASPIVTALLIAGAGGTAICADLGARKIRDEIDAMQVLGIDPV 132 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 L+ PR+ A ++ LL L + + G + + + F + A L++++ Sbjct: 133 HRLVVPRVLASMLVAVLLNGLVSVVGVAGGYFFNVVLQNGTPGAYLASFTTLAQLSDLWA 192 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +KA GIVA +G +G V VV + ++ + + + YF + Sbjct: 193 AEVKALVFGAIAGIVASYKGLTAKGGPKGVGDAVNQSVVITFMLLFVTNFVMTAVYFQV 251 >gi|188579086|ref|YP_001916015.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae PXO99A] gi|188523538|gb|ACD61483.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 249 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 111/246 (45%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + S + F+ L+R++Y VG +P++ + G V+ Sbjct: 3 FVDSIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ +GA L+ + RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ Sbjct: 63 QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D V ++PR WA ++++PLLT + AI G + I F+S ++ Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYVEAVHVLGIDNGTFWSGLSNS 182 Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + + ++K+ +VA GF T VV + +V++ + + Sbjct: 183 VDVWDDFGVAMLKSAIFGGTTALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242 Query: 364 FAIFYF 369 + F Sbjct: 243 LSAMLF 248 >gi|303236789|ref|ZP_07323368.1| conserved hypothetical protein [Prevotella disiens FB035-09AN] gi|302482957|gb|EFL45973.1| conserved hypothetical protein [Prevotella disiens FB035-09AN] Length = 248 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 113/245 (46%), Gaps = 1/245 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G + G + +F+ FL +++M +GV + +V+LISF GAVI Sbjct: 3 IINWLTNFGKYLLLMGRTFSRPERFRMFLKQYVKEMSQLGVDSIGIVLLISFFIGAVICI 62 Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + ++ ++ + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 63 QIKLNVQSPWMPLWVSGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 122 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I LI +P L I + I+GA + + I S Sbjct: 123 LEIMGINSASYLILPKIAGLITIMPFLVIFSAAMGIVGAYATAYFAHIITPVDLTSGLQH 182 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++ ++K+ F A I V+ G+ V S +GK T VV S +++ D Sbjct: 183 SFNSWFMYMSIMKSLFFAFIIASVSSYFGYTVKGGSFDVGKSSTDAVVSSSVLILFSDVF 242 Query: 364 FAIFY 368 Sbjct: 243 LTQLL 247 >gi|326775351|ref|ZP_08234616.1| protein of unknown function DUF140 [Streptomyces cf. griseus XylebKG-1] gi|326655684|gb|EGE40530.1| protein of unknown function DUF140 [Streptomyces cf. griseus XylebKG-1] Length = 290 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 59/247 (23%), Positives = 108/247 (43%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G + + + ++ + I Q ++V + L+S GAVIA Sbjct: 38 LLAPLRETGKLFALAVAVARAIFRRPFQVREFIEQFWFVASVTILPAALVSIPFGAVIAL 97 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q GA+ F+ + +++ ++ A++I+G +GSAI A++GS KI EE+DA+ Sbjct: 98 QVGSLTQQLGAQSFTGGASVLAVIQQASPIIVALLISGAAGSAICADLGSRKIREELDAM 157 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ ++ L+ PR+ A ++ LL L + +G D + + F + Sbjct: 158 EVMGVSPIQRLVVPRVLATMLVAVLLNGLISVVGTLGGYFFNVIMQDGTPGAYLASFSAL 217 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A L +++ KA GIVA G +G V VV + ++ ++ + Sbjct: 218 AQLPDLYISEFKALIFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFFVNMVL 277 Query: 365 AIFYFAI 371 Y I Sbjct: 278 TAIYLQI 284 >gi|182434833|ref|YP_001822552.1| putative YrbE family protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|178463349|dbj|BAG17869.1| putative YrbE family protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 290 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 59/247 (23%), Positives = 108/247 (43%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G + + + ++ + I Q ++V + L+S GAVIA Sbjct: 38 LLAPLRETGKLFALAVAVARAIFRRPFQVREFIEQFWFVASVTILPAALVSIPFGAVIAL 97 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q GA+ F+ + +++ ++ A++I+G +GSAI A++GS KI EE+DA+ Sbjct: 98 QVGSLTQQLGAQSFTGGASVLAVIQQASPIIVALLISGAAGSAICADLGSRKIREELDAM 157 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ ++ L+ PR+ A ++ LL L + +G D + + F + Sbjct: 158 EVMGVSPIQRLVVPRVLATMLVAVLLNGLISVVGTLGGYFFNVIMQDGTPGAYLASFSAL 217 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A L +++ KA GIVA G +G V VV + ++ ++ + Sbjct: 218 AQLPDLYISEFKALIFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFFVNMVL 277 Query: 365 AIFYFAI 371 Y I Sbjct: 278 TAIYLQI 284 >gi|124026456|ref|YP_001015571.1| putative transporter, membrane component [Prochlorococcus marinus str. NATL1A] gi|123961524|gb|ABM76307.1| possible transporter, membrane component [Prochlorococcus marinus str. NATL1A] Length = 249 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 66/239 (27%), Positives = 106/239 (44%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 I G+ AS K LI Q+ G +V++ G V Q A +LS Sbjct: 11 FFSSILIGGQAIASIAKGNINKSDLIDQLMEAGPGSFLIVLITGIAAGTVFNIQVAAELS 70 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + G L++I REI LLTA ++ G+ +A A+IG+MK+ E+IDAI + D Sbjct: 71 KQGLGSAVGGLLAIGMAREIAPLLTATLLTGKVATAYAAQIGTMKVTEQIDAITMLQTDP 130 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A+++ P+ +L A+ Y IP ++F++ +++ Sbjct: 131 VEYLVVPRLCAMVVMAPIQCLLFFSIALFSGQFSSTILYQIPPSIFWNSVREWLITSDLP 190 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 L+KA I I+A G +G T VV ++ V ++D L F Sbjct: 191 FMLVKALVFGLLIAIIACGWGLTTRGGPKEVGSSTTGAVVMTLITVSLVDVLLTQVLFG 249 >gi|282880876|ref|ZP_06289569.1| conserved hypothetical protein [Prevotella timonensis CRIS 5C-B1] gi|281305258|gb|EFA97325.1| conserved hypothetical protein [Prevotella timonensis CRIS 5C-B1] Length = 250 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 63/246 (25%), Positives = 115/246 (46%), Gaps = 2/246 (0%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 I + G + G + + + F I++M +GV +P+V+LISF GA Sbjct: 2 VIKLIITYLITFGKYLLLMGRTFSRPERMRMFFKQYIKEMTKLGVDSIPLVLLISFFIGA 61 Query: 181 VIAQQGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 VI Q + ++ + + L E +++AG+ GS I +E+G+M++ + Sbjct: 62 VICIQMKINVQSPWMPRWTTGYVTREILLLEFSSAFMCLILAGKIGSNIASELGTMRVTQ 121 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +IDA+ MG++ LI P+I LI +P L I ++ + +IGA + + A + Sbjct: 122 QIDALDIMGVNPACYLILPKIMGLITIMPFLVIFSSVAGMIGAYATAYS-GVLSPADLTT 180 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 + + I+ +IK+ A I V+ GF+V + ++G+ T VV S +V+ Sbjct: 181 GLQYSFKVWFIWMSIIKSLVFAFIIASVSSYYGFSVEGGAVAVGEASTNAVVSSSVLVLF 240 Query: 360 IDSLFA 365 D Sbjct: 241 ADVFLT 246 >gi|256380617|ref|YP_003104277.1| hypothetical protein Amir_6634 [Actinosynnema mirum DSM 43827] gi|255924920|gb|ACU40431.1| protein of unknown function DUF140 [Actinosynnema mirum DSM 43827] Length = 260 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 113/245 (46%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 G + + G+ A+S++ + ++Q +++ V L+S GAVIA Q Sbjct: 10 GLLRETGRLFALAGQVVAASFRRPFQVREFVQQCWFLVSVTVLPTALVSIPFGAVIALQL 69 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 Q GA+ F+ + +++ ++TA++IAG GSAI A++GS I EEIDA+ Sbjct: 70 GSLTRQIGAQSFTGAASVLAIIQQASPIVTALLIAGAGGSAICADLGSRTIREEIDAMEV 129 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +G+ V L+ PR+ A ++ LL + + ++G D + + F + A Sbjct: 130 LGVSPVHRLVVPRVLAAMVVAVLLNGMVSVVGVMGGYFFNVVLQDGTPGAYLASFSALAQ 189 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L++++ G +KA GIVA G +G V VV + ++ + + Sbjct: 190 LSDLWIGELKALVFGFIAGIVAAYRGLNPAGGPKGVGDAVNQAVVVTFLLLFFANFVLTT 249 Query: 367 FYFAI 371 Y + Sbjct: 250 IYLQV 254 >gi|72382734|ref|YP_292089.1| putative transporter, membrane component [Prochlorococcus marinus str. NATL2A] gi|72002584|gb|AAZ58386.1| Protein of unknown function DUF140 [Prochlorococcus marinus str. NATL2A] Length = 249 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 68/239 (28%), Positives = 107/239 (44%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 I G+ AS K LI Q+ G +V++ G V Q A +LS Sbjct: 11 FFSSILIGGQAIASIAKGNINKSDLIDQLMEAGPGSFLIVLITGIAAGTVFNIQVAAELS 70 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + G L++I REI LLTA ++ G+ +A A+IG+MK+ E+IDAI + D Sbjct: 71 KQGLGSAVGGLLAIGMAREIAPLLTATLLTGKVATAYAAQIGTMKVTEQIDAITMLQTDP 130 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PRI A+++ P+ +L A+ Y IP ++F++ +++ Sbjct: 131 VEYLVVPRICAMVVMAPIQCLLFFSIALFSGQFSSTILYQIPPSIFWNSVREWLITSDLP 190 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 L+KA I I+A G +G T VV ++ V ++D L FA Sbjct: 191 FMLVKALVFGLLIAIIACGWGLTTRGGPKEVGSSTTGAVVMTLITVSLVDVLLTQVLFA 249 >gi|114766131|ref|ZP_01445135.1| membrane protein [Pelagibaca bermudensis HTCC2601] gi|114541591|gb|EAU44633.1| membrane protein [Roseovarius sp. HTCC2601] Length = 260 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 57/250 (22%), Positives = 107/250 (42%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + +G V + + + + + +G +PVV L + TG Sbjct: 11 GRAALGLLAAIGRVALFACAAISHVVRPPVYGREFLNALLQIGWLSLPVVGLTAVFTGGA 70 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A Q ++F AE +++I +RE+G +L +MIA R S+I AEI +MK+ E+I Sbjct: 71 LALQIYSGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQI 130 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ T+ ++ L+ PR+ A +I +PLL + + I G V A + Sbjct: 131 DALVTLSTHPMKYLVVPRLLAALIVVPLLVAVGDVIGIFGGYFVATGSLGFNPAAYLENT 190 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 +I + L+K ++ G G + +G+ V + +++ + Sbjct: 191 VDFLEPLDIVSSLVKGCAFGGIAALMGCFYGMQSGRGAQGVGRATKGSVEAAAVLILAAN 250 Query: 362 SLFAIFYFAI 371 L +F+I Sbjct: 251 FLLTGVFFSI 260 >gi|114564855|ref|YP_752369.1| hypothetical protein Sfri_3703 [Shewanella frigidimarina NCIMB 400] gi|114336148|gb|ABI73530.1| protein of unknown function DUF140 [Shewanella frigidimarina NCIMB 400] Length = 264 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 62/268 (23%), Positives = 121/268 (45%), Gaps = 12/268 (4%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 N+ N ++G K I+ L ++S+ S +I+Q+Y++G Sbjct: 2 NALFNSVSNLGAATRKNIDSIGLATLFLLRIVSSLFTGLVS-------FKQVIKQIYFIG 54 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 + V+I+ + TG V+A Q L +FG+ +++ ++E+G ++TA+M+ R Sbjct: 55 NRSLIVIIVAALFTGMVVALQFYDTLVRFGSVDLLGSAVALSLIKELGPVMTALMVIARV 114 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 GSA +EIG M+ ++ DA+ M ++ R ++ PR+ A + +P+LT + + I G I Sbjct: 115 GSATCSEIGIMRNEQQFDALDCMAINSYRYVMLPRLLAALFCVPMLTAVFDLVGIGGGYI 174 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG-----VHS 339 V + T + ++ G IK+ I + + GF + + + Sbjct: 175 VGVHIQGESPGAYIQGVMDTISFKDVLVGQIKSLVFGLFIMWIPLYYGFYLHLNQKNMGA 234 Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + T VV S I++ D + + Sbjct: 235 EGVSNGTTQAVVMSAIIMLFSDYIVSSL 262 >gi|284034024|ref|YP_003383955.1| hypothetical protein Kfla_6153 [Kribbella flavida DSM 17836] gi|283813317|gb|ADB35156.1| protein of unknown function DUF140 [Kribbella flavida DSM 17836] Length = 257 Score = 200 bits (510), Expect = 3e-49, Method: Composition-based stats. Identities = 62/239 (25%), Positives = 112/239 (46%) Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G + + + +S + L ++Q ++V + L++ GAVIA Q + Q Sbjct: 13 GSLFAFALDTARASVRRPFQLREFLQQAWFVASVTIIPTALVAIPFGAVIALQVGGLIQQ 72 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 FGA+ F+ + +RE + TA++IAG GSAI A++GS KI EE+DA+ +G+D + Sbjct: 73 FGAQAFTGSAAVLAVVREASPIATALLIAGAGGSAICADLGSRKIREELDAMMVLGIDPI 132 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 L+ PR+ A ++ L + ++G + D + + F + A L +++ Sbjct: 133 HRLVVPRVLATMLVAFFLNGFVSVVGVMGGYVFNVVLQDGTPGAYIASFTALAHLPDLWQ 192 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 G KA +VA +G G +G V VV + ++ + + YF + Sbjct: 193 GQAKALVFGFIAAVVASYKGVNAGGGPKGVGDAVNQSVVITFMLLFVANFSMTAIYFQL 251 >gi|329957353|ref|ZP_08297873.1| hypothetical protein HMPREF9445_02751 [Bacteroides clarus YIT 12056] gi|328523066|gb|EGF50169.1| hypothetical protein HMPREF9445_02751 [Bacteroides clarus YIT 12056] Length = 247 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 64/247 (25%), Positives = 115/247 (46%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G I G A + + F I ++ +GV+ + +V+LISF GAVI Sbjct: 1 MIKALRTVGRYIMLMGRVFARPERMRMFFRQYINEIEQLGVNSIGIVLLISFFIGAVITI 60 Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + +++ ++ + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 61 QIKLNIESPFMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I A++ ++PL+ + F+ IIGA W + Sbjct: 121 LEIMGVNSANYLILPKIAAMVSTIPLMVTFSIFAGIIGAFCTCWFGGIMSAVDLEYGLQY 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 I+ G+IK+ F A I V+ G+ V S +GK T VV S +++ D + Sbjct: 181 MFVEWFIWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLILFADLI 240 Query: 364 FAIFYFA 370 Sbjct: 241 LTQLLMG 247 >gi|254431004|ref|ZP_05044707.1| ABC-type transport system involved in resistance to organic solvents permease component [Cyanobium sp. PCC 7001] gi|197625457|gb|EDY38016.1| ABC-type transport system involved in resistance to organic solvents permease component [Cyanobium sp. PCC 7001] Length = 258 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 59/231 (25%), Positives = 111/231 (48%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G+ ++ + + L L++++ G +V++ + G V Q +LS+ GA Sbjct: 28 GQAISAIARGRIGLNDLMQELLEAGPGSFLIVVITALAAGTVFNIQVVAELSKQGANAAV 87 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 L+++ REI LLTA ++ G+ +A A++G+MK+ E+IDAI + D V+ L+ PR Sbjct: 88 GGLLALGLSREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTDPVQYLVVPR 147 Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319 + A+++ P+ +L I + Y+IP +VF++ + ++ L+KA Sbjct: 148 VLAMVVMAPVQCLLFFGVGIWSGQLSSSLLYNIPPSVFWTSVRTWMQPEDLPFMLVKALV 207 Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 I ++A G +G T VV + V ++D+L F Sbjct: 208 FGLQIAVIACGWGLTTRGGPKEVGTSTTGAVVMILVTVALMDALLTKVLFG 258 >gi|218128442|ref|ZP_03457246.1| hypothetical protein BACEGG_00010 [Bacteroides eggerthii DSM 20697] gi|317475731|ref|ZP_07934990.1| hypothetical protein HMPREF1016_01972 [Bacteroides eggerthii 1_2_48FAA] gi|217989333|gb|EEC55646.1| hypothetical protein BACEGG_00010 [Bacteroides eggerthii DSM 20697] gi|316908114|gb|EFV29809.1| hypothetical protein HMPREF1016_01972 [Bacteroides eggerthii 1_2_48FAA] Length = 247 Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats. Identities = 64/247 (25%), Positives = 115/247 (46%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G I G A + + F I ++ +GV+ + +V+LISF GAVI Sbjct: 1 MIKALRTVGKYIMLMGRVFARPERMRMFFRQYINEIEQLGVNSIGIVLLISFFIGAVITI 60 Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + +++ ++ + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 61 QIKLNIESPFMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I A++ ++PL+ + F+ IIGA W + Sbjct: 121 LEIMGVNSANYLILPKIAAMVSTIPLMVTFSIFAGIIGAFCTCWFGGIMSAVDLEYGLQY 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 I+ G+IK+ F A I V+ G+ V S +GK T VV S +++ D + Sbjct: 181 MFVEWFIWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLILFADLI 240 Query: 364 FAIFYFA 370 Sbjct: 241 LTQLLMG 247 >gi|160890565|ref|ZP_02071568.1| hypothetical protein BACUNI_03008 [Bacteroides uniformis ATCC 8492] gi|270295705|ref|ZP_06201905.1| conserved hypothetical protein [Bacteroides sp. D20] gi|317479890|ref|ZP_07939007.1| hypothetical protein HMPREF1007_02124 [Bacteroides sp. 4_1_36] gi|156859564|gb|EDO52995.1| hypothetical protein BACUNI_03008 [Bacteroides uniformis ATCC 8492] gi|270273109|gb|EFA18971.1| conserved hypothetical protein [Bacteroides sp. D20] gi|316903964|gb|EFV25801.1| hypothetical protein HMPREF1007_02124 [Bacteroides sp. 4_1_36] Length = 247 Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats. Identities = 63/244 (25%), Positives = 115/244 (47%), Gaps = 1/244 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +G I G A + + F + ++ +GV+ + +V+LISF GAVI Q Sbjct: 4 ALKTVGRYIILMGRVFARPERMRMFFRQYVNELEQLGVNSIGIVLLISFFIGAVITIQIK 63 Query: 188 FQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 + +++ ++ + L E + +++AG+ GS I +E+G+M++ ++IDA+ Sbjct: 64 LNIESPFMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEI 123 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG++ LI P+I A++ ++PL+ + F+ IIGA W + Sbjct: 124 MGVNSANYLILPKIAAMVTTIPLMVTFSIFAGIIGAFCTCWFGGIMSAVDLEYGLQYMFV 183 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 I+ G+IK+ F A I V+ G+ V S +GK T VV S +++ D + Sbjct: 184 EWFIWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLILFADLILTQ 243 Query: 367 FYFA 370 Sbjct: 244 LLMG 247 >gi|134103293|ref|YP_001108954.1| putative ABC-transporter integral membrane protein [Saccharopolyspora erythraea NRRL 2338] gi|291004488|ref|ZP_06562461.1| putative ABC-transporter integral membrane protein [Saccharopolyspora erythraea NRRL 2338] gi|133915916|emb|CAM06029.1| putative ABC-transporter integral membrane protein [Saccharopolyspora erythraea NRRL 2338] Length = 263 Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats. Identities = 56/239 (23%), Positives = 109/239 (45%) Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G + + + + K + ++Q +++ + L++ GAVIA Q Q Sbjct: 19 GRLFALMLDVGRALPKRPFQVREFVQQCWFIASVTILPTALVAIPFGAVIALQLGSLTRQ 78 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 GA+ F+ + +++ ++TA++IAG GSAI A++GS KI +EIDA+ +G+ V Sbjct: 79 IGAQSFTGGASVLAIIQQASPIVTALLIAGAGGSAICADLGSRKIRDEIDAMEVLGVSPV 138 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 L+ PR+ A ++ LL + + ++G + + F++ A L +I+ Sbjct: 139 HRLVVPRVLAAMLVAVLLNGMVSVVGVMGGYFFNVIMQGGTPGAYMASFNALAQLPDIWI 198 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +KA G+VA G +G V VV + ++ ++ + Y + Sbjct: 199 SELKALIFGFLAGVVAAYRGLNPPPGPKGVGDAVNQSVVITFLLLFAVNFVLTTIYLQL 257 >gi|319900088|ref|YP_004159816.1| hypothetical protein Bache_0200 [Bacteroides helcogenes P 36-108] gi|319415119|gb|ADV42230.1| protein of unknown function DUF140 [Bacteroides helcogenes P 36-108] Length = 247 Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats. Identities = 65/247 (26%), Positives = 116/247 (46%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G I G A + + F + ++ +GV+ + +V+LISF GAVI Sbjct: 1 MIKALRTVGRYIILMGRVFARPERMRMFFRQYLNEVEQLGVNSIGIVLLISFFIGAVITI 60 Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + +++ ++ + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 61 QIKLNIESPFMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I AL+ ++PL+ + F+ IIGA W + Sbjct: 121 LEIMGVNSANYLILPKISALVTTIPLMVTFSIFAGIIGAFCTCWFGGIMSAVDLEYGLQY 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 T I+ G+IK+ F A I V+ G+ V S +GK T VV S +++ D + Sbjct: 181 TFVEWFIWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLILFADLI 240 Query: 364 FAIFYFA 370 Sbjct: 241 LTQLLMG 247 >gi|56697513|ref|YP_167881.1| membrane protein [Ruegeria pomeroyi DSS-3] gi|56679250|gb|AAV95916.1| membrane protein [Ruegeria pomeroyi DSS-3] Length = 260 Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 110/245 (44%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 S G V + + + + L + +G +PVV L + TG +A Q Sbjct: 16 SVLASFGRVTLFALDAVSHILRPPYYPRELAIALLNIGWLSLPVVGLTAIFTGGALALQI 75 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 ++F AE +++I +RE+G +L +MIA R S+I AEI +MK+ E+IDA+ T Sbjct: 76 YAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQIDALVT 135 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 + ++ L +PR+ A +I++PLL + + I+G V + A + Sbjct: 136 LSTHPMKYLTAPRVLAALITVPLLVGIGDIIGIMGGYTVAVQNLGFNAAAYLQNTVDFLE 195 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 ++ + L+K ++ G G + +G+ V + +++ + + Sbjct: 196 TRDVVSSLVKGAVFGVIAALMGCYYGMNSGRGAQGVGRATKGSVEAAAVLILAANFVLTG 255 Query: 367 FYFAI 371 +F+I Sbjct: 256 VFFSI 260 >gi|160882382|ref|ZP_02063385.1| hypothetical protein BACOVA_00331 [Bacteroides ovatus ATCC 8483] gi|237719054|ref|ZP_04549535.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|260172011|ref|ZP_05758423.1| hypothetical protein BacD2_09110 [Bacteroides sp. D2] gi|299148138|ref|ZP_07041200.1| putative membrane protein [Bacteroides sp. 3_1_23] gi|315920324|ref|ZP_07916564.1| conserved hypothetical protein [Bacteroides sp. D2] gi|156112195|gb|EDO13940.1| hypothetical protein BACOVA_00331 [Bacteroides ovatus ATCC 8483] gi|229451433|gb|EEO57224.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|298512899|gb|EFI36786.1| putative membrane protein [Bacteroides sp. 3_1_23] gi|313694199|gb|EFS31034.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 247 Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 114/247 (46%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G G + + + F + ++ +GV+ + +V+LISF GAVI Sbjct: 1 MIKALRTVGRYFMLMGRTFSRPERMRMFFRQYLNELEQLGVNSIGIVLLISFFIGAVITI 60 Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + +++ ++ + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 61 QIKLNIESPWMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I A++ +P+L + F+ IIGA W + Sbjct: 121 LEIMGINSANYLILPKITAMVTVIPILVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQY 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 I+ G+IK+ F A I V+ G+ V S ++GK T VV S +++ D + Sbjct: 181 MFNEWFIWAGIIKSLFFAFIIASVSAFFGYTVEGGSIAVGKASTDAVVSSSVLILFSDLI 240 Query: 364 FAIFYFA 370 Sbjct: 241 LTKLLMG 247 >gi|84502659|ref|ZP_01000778.1| membrane protein [Oceanicola batsensis HTCC2597] gi|84389054|gb|EAQ01852.1| membrane protein [Oceanicola batsensis HTCC2597] Length = 258 Score = 199 bits (507), Expect = 5e-49, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 116/264 (43%), Gaps = 7/264 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 L IG +++ + A + + + + + FL +L+ +G Sbjct: 1 MTRLLGGIGAQVLAVLAAVGRVAIFAAVTLRH---LVTPPFYGREFLGALLN----IGWL 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PVV L + TG +A Q S+F AE +++I +RE+G +L +MIA R S Sbjct: 54 SLPVVGLTAVFTGGALALQIYAGGSRFDAEAVVPQIVAIGMVRELGPVLVGLMIAARVTS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 +I AEI +MK+ E+IDA+ T+ ++ L PR+ A ++++PLL + + I G V Sbjct: 114 SIAAEIATMKVTEQIDALVTLSTHPMKYLTVPRVLAGLVTVPLLVGVGDIIGIFGGYQVA 173 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + A + ++ + L+K ++ G G + +G Sbjct: 174 VRSLGFNPATYLQNTVDFLEPLDVLSSLVKGAAFGVIATLMGCYSGMNSGRGAQGVGAAT 233 Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370 + V + +++ + L +F+ Sbjct: 234 KSSVEAASVLILAANFLLTGVFFS 257 >gi|239931478|ref|ZP_04688431.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis ATCC 14672] gi|291439854|ref|ZP_06579244.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis ATCC 14672] gi|291342749|gb|EFE69705.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis ATCC 14672] Length = 254 Score = 199 bits (507), Expect = 5e-49, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 106/247 (42%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + + E + ++ + Q ++V + L+S GAVIA Sbjct: 2 ITGALRQTGRLFALAAEVSRAIFRRPFQFREFVEQFWFVAGVTILPAALVSIPFGAVIAL 61 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q GA+ F+ + +++ L+ A++IAG GSAI A++GS KI EE+DA+ Sbjct: 62 QVGSLTQQLGAQSFTGGASVLAVVQQASPLIVALLIAGAGGSAICADLGSRKIREELDAM 121 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ V+ L+ PR+ A + LL L + +G D + S F + Sbjct: 122 EVMGVSPVQRLVVPRVLATMGVAVLLNGLVSVVGTLGGYFFNVVLQDGTPGAYLSSFSAL 181 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A A+++ +KA GIVA G +G V VV + ++ ++ + Sbjct: 182 AQPADLYISELKALVFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMVM 241 Query: 365 AIFYFAI 371 Y I Sbjct: 242 TALYLQI 248 >gi|58040555|ref|YP_192519.1| ABC transporter permease protein [Gluconobacter oxydans 621H] gi|58002969|gb|AAW61863.1| ABC transporter permease protein [Gluconobacter oxydans 621H] Length = 387 Score = 199 bits (507), Expect = 5e-49, Method: Composition-based stats. Identities = 83/375 (22%), Positives = 158/375 (42%), Gaps = 15/375 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 E V +G W++ + K S + DT + Sbjct: 25 GEQTAPVMVLSGTWQAR--AGNIPVFPKDGLKKAPGAHLSFQTSDLQVWDTGLVAFLWDL 82 Query: 62 MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 H + +Q + + QL L+ + + ++ + F +G Sbjct: 83 KRVAHDAGISLDMQTLPGPMRQLLELLPEVPDEPVHHKTARTPF--------LETVGNHA 134 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + + + + + ++ G + + ++ L+ G + +V +++F+ Sbjct: 135 IASMTEVGVVSEL--GALTAKGAVLTLLGRSRMRMVDLLANTADAGPYALLIVGIVNFLI 192 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA++A GA +L +F A I+ L+ I +RE+ ++TA+++AGR+G A A I +M+ N Sbjct: 193 GAILAFVGAVELQKFAAGIYVASLVGIAMVREMAAVMTAIIMAGRTGGAYAARISTMQGN 252 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ G+ LI P + +LII++P L + ++G +V DI A +F Sbjct: 253 EEIDALNVFGIPTSTYLILPAVLSLIITMPFLYLYGCLIGMLGGFVVAISMLDITAAGYF 312 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + + + G K+ IG+ + + G G + +G T VV I VI Sbjct: 313 HQTVTAFGIGQFIFGFTKSLVFGAFIGLTSCRIGLKAGRSAADVGIAATRAVVVGIVGVI 372 Query: 359 IIDSLFAIFYFAIGI 373 ID++FA+ +GI Sbjct: 373 AIDAIFAVIADVLGI 387 >gi|126728696|ref|ZP_01744511.1| membrane protein [Sagittula stellata E-37] gi|126710626|gb|EBA09677.1| membrane protein [Sagittula stellata E-37] Length = 260 Score = 199 bits (507), Expect = 5e-49, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 109/251 (43%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 +G V + + + + M VG +PVV L +F TGA Sbjct: 10 LGRALLHWLAAIGRVTRFGLTALSHTLRPPFYAGEFGAAMMNVGWLSLPVVGLTAFFTGA 69 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 +A Q ++F AE +++I +RE+G +L +MIA R S+I AEI +MK+ E+ Sbjct: 70 ALALQIYSGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQ 129 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ T+ + ++ L++PR+ A ++ +P L + + + G V A + Sbjct: 130 IDALTTLSTNPMKYLVAPRLLAALLVVPALVGIGDVIGVFGGYAVATGSLGFNPAAYLKN 189 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 ++ + L+K ++ G G + +G+ V + +++ Sbjct: 190 TVDFLEPLDVISSLVKGCAFGGIAALMGCYFGMMSGRGAQGVGRATKGSVEAAAVLILAA 249 Query: 361 DSLFAIFYFAI 371 + L +F++ Sbjct: 250 NFLLTGAFFSL 260 >gi|224535957|ref|ZP_03676496.1| hypothetical protein BACCELL_00821 [Bacteroides cellulosilyticus DSM 14838] gi|224522412|gb|EEF91517.1| hypothetical protein BACCELL_00821 [Bacteroides cellulosilyticus DSM 14838] Length = 247 Score = 199 bits (507), Expect = 5e-49, Method: Composition-based stats. Identities = 65/247 (26%), Positives = 115/247 (46%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G I G A + + F I +M +GV+ + +V+LISF GAVI Sbjct: 1 MIKALKTVGRYIMLMGRTFARPERMRMFFRQYINEMGQLGVNSIGIVLLISFFIGAVITI 60 Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + +++ ++ + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 61 QIKLNIESPFMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I+A++ ++P L + F+ IIGA W + Sbjct: 121 LEIMGVNSANYLILPKIFAMVTTIPFLVTFSIFAGIIGAFATCWFGGIMSAVDLEYGLQY 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 I+ G+IK+ F A I V+ G+ V S +GK T VV S +++ D + Sbjct: 181 MFVEWFIWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLILFADLI 240 Query: 364 FAIFYFA 370 Sbjct: 241 LTKLLMG 247 >gi|190576453|ref|YP_001974298.1| putative transmembrane component of ABC transporter protein [Stenotrophomonas maltophilia K279a] gi|254522804|ref|ZP_05134859.1| toluene tolerance protein [Stenotrophomonas sp. SKA14] gi|190014375|emb|CAQ48023.1| putative transmembrane component of ABC transporter protein [Stenotrophomonas maltophilia K279a] gi|219720395|gb|EED38920.1| toluene tolerance protein [Stenotrophomonas sp. SKA14] Length = 249 Score = 199 bits (507), Expect = 5e-49, Method: Composition-based stats. Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG + S + FL L R++Y +G +P++ + G V+ Sbjct: 3 FVQATRSLGRAGLFSLTVLRGSLPTRDFLAELTREIYKIGARSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ FGA L+ + RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ Sbjct: 63 QGYRTLTTFGAADALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D V ++PR WA ++++PLLT + AI + + VF+S ++ Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGIFCSLAISASYFEAVHVLGLDNGVFWSALRNS 182 Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++K+ +VA GF T VV + +V++ + + Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242 Query: 364 FAIFYF 369 + F Sbjct: 243 LSAMLF 248 >gi|167765445|ref|ZP_02437558.1| hypothetical protein BACSTE_03835 [Bacteroides stercoris ATCC 43183] gi|167697073|gb|EDS13652.1| hypothetical protein BACSTE_03835 [Bacteroides stercoris ATCC 43183] Length = 247 Score = 199 bits (507), Expect = 6e-49, Method: Composition-based stats. Identities = 64/247 (25%), Positives = 116/247 (46%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G I G A + + F I ++ +GV+ + +V+LISF GAVI Sbjct: 1 MIKALRTVGRYIILMGRVFARPERMRMFFRQYINEIEQLGVNSIGIVLLISFFIGAVITI 60 Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + +++ ++ + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 61 QIKLNIESPFMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I A++ ++PL+ + F+ IIGA W + Sbjct: 121 LEIMGVNSANYLILPKIAAMVSTIPLMVTFSIFAGIIGAFCTCWFGGIMSAVDLEYGLQY 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 I+ G+IK+ F A I V+ G++V S +GK T VV S +++ D + Sbjct: 181 MFVEWFIWCGIIKSLFFAFIIASVSAFFGYSVEGGSIEVGKASTDSVVCSSVLILFADLI 240 Query: 364 FAIFYFA 370 Sbjct: 241 LTQLLMG 247 >gi|150009005|ref|YP_001303748.1| ABC transporter permease [Parabacteroides distasonis ATCC 8503] gi|256840994|ref|ZP_05546501.1| ABC transporter permease [Parabacteroides sp. D13] gi|262383895|ref|ZP_06077031.1| ABC transporter permease [Bacteroides sp. 2_1_33B] gi|298375763|ref|ZP_06985719.1| membrane protein [Bacteroides sp. 3_1_19] gi|301312055|ref|ZP_07217977.1| putative membrane protein [Bacteroides sp. 20_3] gi|149937429|gb|ABR44126.1| conserved hypothetical protein, putative ABC transporter permease protein [Parabacteroides distasonis ATCC 8503] gi|256736837|gb|EEU50164.1| ABC transporter permease [Parabacteroides sp. D13] gi|262294793|gb|EEY82725.1| ABC transporter permease [Bacteroides sp. 2_1_33B] gi|298266800|gb|EFI08457.1| membrane protein [Bacteroides sp. 3_1_19] gi|300830157|gb|EFK60805.1| putative membrane protein [Bacteroides sp. 20_3] Length = 248 Score = 199 bits (507), Expect = 6e-49, Method: Composition-based stats. Identities = 65/244 (26%), Positives = 117/244 (47%), Gaps = 2/244 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 H +G + ++ F LI+++Y +GV + +VI+IS G VIA Q + Sbjct: 4 ALHRMGEYTLLMMKSITLPDRWSMFFKQLIKEIYKLGVDSLWIVIIISVFIGTVIAIQIS 63 Query: 188 FQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 +S F+I + + L E + A+++AG+ GS I +EIG+M++ E+IDA+ Sbjct: 64 LNISSPLIPKFTIGYTTREIILLEFSSSIMALILAGKVGSNIASEIGTMRVTEQIDAMEI 123 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY-DIPFAVFFSRFHSTA 305 MG++ LI P++ L+I +P+L I + F+ I+G + + + F Sbjct: 124 MGVNSANFLILPKMLGLMIFIPVLVIFSMFTGIMGGIFASYSTSTGMTPSSFEYGLQFYF 183 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 I+ +IK+ A I +A G+ V + +GK T VV S ++++ D + Sbjct: 184 NEFYIWYSIIKSVVYAFIISSIAAYFGYNVKGGALEVGKASTNAVVMSSIMILLADVILT 243 Query: 366 IFYF 369 Sbjct: 244 HLML 247 >gi|189463681|ref|ZP_03012466.1| hypothetical protein BACINT_00012 [Bacteroides intestinalis DSM 17393] gi|189438631|gb|EDV07616.1| hypothetical protein BACINT_00012 [Bacteroides intestinalis DSM 17393] Length = 247 Score = 199 bits (507), Expect = 6e-49, Method: Composition-based stats. Identities = 64/247 (25%), Positives = 114/247 (46%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G I G A + + F + +M +GV+ + +V+LISF GAVI Sbjct: 1 MIKALKTVGRYIMLMGRTFARPERMRMFFRQYLNEMGQLGVNSIGIVLLISFFIGAVITI 60 Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + +++ ++ + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 61 QIKLNIESPFMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I A++ ++P L + F+ IIGA W + Sbjct: 121 LEIMGVNSANYLILPKICAMVTTIPFLVTFSIFAGIIGAFATCWFGGIMSAVDLEYGLQY 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 I+ G+IK+ F A I V+ G+ V S +GK T VV S +++ D + Sbjct: 181 MFVEWFIWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLILFADLI 240 Query: 364 FAIFYFA 370 Sbjct: 241 LTKLLMG 247 >gi|159044922|ref|YP_001533716.1| hypothetical protein Dshi_2379 [Dinoroseobacter shibae DFL 12] gi|157912682|gb|ABV94115.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12] Length = 258 Score = 199 bits (506), Expect = 7e-49, Method: Composition-based stats. Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 7/264 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 L IG ++ + + A +G S+ + ++ F +L+ +G Sbjct: 1 MIRLIAAIGASVLGILGAAGRFAIFVGAAFSHM---VRPPFYWREFGQALLN----IGYF 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PVV L +F TG +A Q ++F AE +++I +RE+G +L +MIA R S Sbjct: 54 SLPVVGLTAFFTGGALALQIYAGGARFSAEAVVPQIVAIGMVRELGPVLGGLMIAARVTS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 +I AEI +MK+ E+IDA+ T+ ++ L +PR+ A I+ +PLL + + I+G +V Sbjct: 114 SIAAEIATMKVTEQIDALVTLSTHPMKYLTAPRVLAAILVVPLLVAVGDTIGIMGGYLVS 173 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 A + L +I + L K ++ G G + +G Sbjct: 174 TSRLGFNPATYLQNTVDFLELHDIVSSLAKGAVFGAIAALMGCYSGMNSGRGAQGVGAAT 233 Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370 + VV + +++ + + +F+ Sbjct: 234 KSSVVAAAVLILAANYMLTELFFS 257 >gi|154494356|ref|ZP_02033676.1| hypothetical protein PARMER_03711 [Parabacteroides merdae ATCC 43184] gi|154085800|gb|EDN84845.1| hypothetical protein PARMER_03711 [Parabacteroides merdae ATCC 43184] Length = 248 Score = 199 bits (506), Expect = 7e-49, Method: Composition-based stats. Identities = 63/244 (25%), Positives = 118/244 (48%), Gaps = 2/244 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 H +G + G+ + ++ F LI+++Y +GV + +V++IS G VIA Q + Sbjct: 4 ALHQVGEYVMLMGKCISVPNRWSMFFKQLIKEIYKLGVDSLWIVVIISIFIGTVIAIQIS 63 Query: 188 FQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 +S F+I + + L E + ++++AG+ GS I +EIG+M++ E+IDA+ Sbjct: 64 LNISSPLIPKFTIGYTTREIILLEFSSSIMSLILAGKVGSNIASEIGTMRVTEQIDAMEI 123 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY-DIPFAVFFSRFHSTA 305 MG++ LI P++ ++ +P+L I + F+ I+G + A F Sbjct: 124 MGVNSANFLILPKMVGMMTFIPVLVIFSMFTGILGGIAASHSTGTGMTPASFEYGLQFYF 183 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 I+ +IK+ A I +A G+ V + +GK T VV S ++++ D + Sbjct: 184 NEFYIWYSIIKSVVYAFIISSIAAYFGYNVKGGALEVGKASTNAVVMSSIMILLADVILT 243 Query: 366 IFYF 369 Sbjct: 244 NLML 247 >gi|298384787|ref|ZP_06994346.1| membrane protein [Bacteroides sp. 1_1_14] gi|298261931|gb|EFI04796.1| membrane protein [Bacteroides sp. 1_1_14] Length = 247 Score = 199 bits (506), Expect = 7e-49, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G I G + + + F + +M +GV+ + +V+LISF GAVI Sbjct: 1 MIKALRTVGRYIMLMGRTFSRPERMRMFFRQYLNEMEQLGVNSIGIVLLISFFIGAVITI 60 Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + +++ ++ + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 61 QIKLNIESPWMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I A++ +P+L + F+ IIGA W + Sbjct: 121 LEIMGINSANYLILPKITAMVTVIPVLVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQY 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 I+ G+IK+ F A I V+ G+ V S ++GK T VV S +++ D + Sbjct: 181 MFVEWFIWAGIIKSLFFAFIIASVSAFFGYTVDGGSIAVGKASTDAVVSSSVLILFADLV 240 Query: 364 FAIFYFA 370 Sbjct: 241 LTKLLMG 247 >gi|21220886|ref|NP_626665.1| ABC-transporter integral membrane protein [Streptomyces coelicolor A3(2)] gi|256787958|ref|ZP_05526389.1| ABC-transporter integral membrane protein [Streptomyces lividans TK24] gi|289771845|ref|ZP_06531223.1| ABC-transporter integral membrane protein [Streptomyces lividans TK24] gi|8247037|emb|CAB92895.1| putative ABC-transporter integral membrane protein [Streptomyces coelicolor A3(2)] gi|289702044|gb|EFD69473.1| ABC-transporter integral membrane protein [Streptomyces lividans TK24] Length = 254 Score = 199 bits (506), Expect = 7e-49, Method: Composition-based stats. Identities = 62/247 (25%), Positives = 106/247 (42%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + + E + ++ + Q ++V + L+S GAVIA Sbjct: 2 ITGALRQTGRLFALAAEVVRAVFRRPFQFREFVEQFWFVASVTILPAALVSIPFGAVIAL 61 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q GA+ F+ + +++ L+ A++IAG GSAI A++GS +I EE+DA+ Sbjct: 62 QVGSLTEQLGAQSFTGGASVLAVVQQASPLIVALLIAGAGGSAICADLGSRRIREELDAM 121 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ V+ L+ PR+ A + LL L + I+G + S F + Sbjct: 122 EVMGVSPVQRLVVPRVLAAMGVAVLLNGLVSVVGILGGYFFNVIMQGGTPGAYLSSFSAL 181 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A L +++ +KA GIVA G +G V VV + ++ ++ + Sbjct: 182 AQLPDLYVSELKALVFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMVM 241 Query: 365 AIFYFAI 371 Y I Sbjct: 242 TAVYLQI 248 >gi|91070487|gb|ABE11396.1| putative transporter, membrane component [uncultured Prochlorococcus marinus clone HOT0M-1A11] Length = 251 Score = 198 bits (505), Expect = 8e-49, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 112/247 (45%), Gaps = 3/247 (1%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + L + G+ ++ K L Q+ G + +V++ G V Q Sbjct: 5 NFFKRLLSSLIIGGQAMNFIFRGKISKNDLFDQLMESGPGSLLIVLITGIAAGTVFNIQV 64 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A QL+ G L+++ RE+ LLTA ++ G+ +A A++G+MK+ E+I+AI Sbjct: 65 ASQLTSMGVSSEIGGLLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTEQIEAITM 124 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS--- 303 + + V+ L+ PR+ +++I P+ +L A+ I +Y +P VF++ S Sbjct: 125 LRTEPVQYLVVPRLLSMVIMSPIQCLLFLSVALWSGQIWSTIFYKVPPIVFWTSVRSGNV 184 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + T ++ + LIK+ I I+A G +G T VV ++ V ++D L Sbjct: 185 SLTSTDLTSMLIKSVVFGLIISIIACGYGLTTKGGPKEVGTSTTGAVVMTLVTVSLMDVL 244 Query: 364 FAIFYFA 370 F Sbjct: 245 LTQILFG 251 >gi|302560790|ref|ZP_07313132.1| YrbE family protein [Streptomyces griseoflavus Tu4000] gi|302478408|gb|EFL41501.1| YrbE family protein [Streptomyces griseoflavus Tu4000] Length = 254 Score = 198 bits (505), Expect = 8e-49, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 107/247 (43%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + + E + ++ I Q +++ + L+S GAVIA Sbjct: 2 ITGALRQTGRLFALAAEVSRAVFRRPFQFREFIEQFWFIAGVTILPAALVSIPFGAVIAL 61 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q GA+ F+ + +++ L+ A++IAG GSAI A++GS KI EE+DA+ Sbjct: 62 QVGSLTQQLGAQSFTGGASVLAVVQQASPLIVALLIAGAGGSAICADLGSRKIREELDAM 121 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ V+ L+ PR+ A + LL L + +G D + S F + Sbjct: 122 EVMGVSPVQRLVVPRVLATMGVAVLLNGLVSVVGTLGGYFFNVVMQDGTPGAYLSSFSAL 181 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A L++++ +KA GIVA G +G V VV + ++ ++ + Sbjct: 182 AQLSDLYISELKALVFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMVM 241 Query: 365 AIFYFAI 371 Y I Sbjct: 242 TGIYLQI 248 >gi|294672817|ref|YP_003573433.1| hypothetical protein PRU_0026 [Prevotella ruminicola 23] gi|294473166|gb|ADE82555.1| putative membrane protein [Prevotella ruminicola 23] Length = 251 Score = 198 bits (505), Expect = 9e-49, Method: Composition-based stats. Identities = 60/241 (24%), Positives = 110/241 (45%), Gaps = 1/241 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 G + G + + + FL I +M +G++ + +V++ISF GAVI Q Sbjct: 10 LTTFGRYLMLMGRVFSRPERMRMFLKQYITEMTQLGINSIGIVLIISFFIGAVICIQMKL 69 Query: 189 QLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + + + + L E + +++AG+ GS I +E+G+M++ ++IDA+ M Sbjct: 70 NIQSPWMPRWVAGYTTREILLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIM 129 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ LI P+I L+ +P L I ++ + IIGA + + I + Sbjct: 130 GINSACYLILPKIIGLLTIMPFLVIFSSATGIIGAYGTAYIGHIIAPDDLTAGLQHAFIP 189 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ +IK+ F A I V G+ V S ++GK T VV S +++ D Sbjct: 190 WFVWMSIIKSQFFAFIISSVPAFCGYTVEGGSVNVGKASTDAVVTSSVLILFSDVFLTQL 249 Query: 368 Y 368 Sbjct: 250 L 250 >gi|29349246|ref|NP_812749.1| hypothetical protein BT_3838 [Bacteroides thetaiotaomicron VPI-5482] gi|253573093|ref|ZP_04850484.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|29341154|gb|AAO78943.1| putative ABC transporter [Bacteroides thetaiotaomicron VPI-5482] gi|251837316|gb|EES65416.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 247 Score = 198 bits (505), Expect = 9e-49, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G I G + + + F + +M +GV+ + +V+LISF GAVI Sbjct: 1 MIKALRTVGRYIILMGRTFSRPERMRMFFRQYLNEMEQLGVNSIGIVLLISFFIGAVITI 60 Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + +++ ++ + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 61 QIKLNIESPWMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I A++ +P+L + F+ IIGA W + Sbjct: 121 LEIMGINSANYLILPKITAMVTVIPVLVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQY 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 I+ G+IK+ F A I V+ G+ V S ++GK T VV S +++ D + Sbjct: 181 MFVEWFIWAGIIKSLFFAFIIASVSAFFGYTVDGGSIAVGKASTDAVVSSSVLILFADLV 240 Query: 364 FAIFYFA 370 Sbjct: 241 LTKLLMG 247 >gi|317968902|ref|ZP_07970292.1| putative transporter, membrane component [Synechococcus sp. CB0205] Length = 257 Score = 198 bits (505), Expect = 1e-48, Method: Composition-based stats. Identities = 58/239 (24%), Positives = 109/239 (45%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + G+ ++ K + LI ++ G ++++ G V Q A +L Sbjct: 18 LGESLLIGGQAVSALAKGQINPNDLIAELMEAGPGSFLIILITGLAAGTVFNIQAASELV 77 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + GA ++++ REI +LTA ++ G+ +A A++G+MK+ E+IDAI + D Sbjct: 78 KQGAGSTVGGILALGLAREIAPILTATLVTGKVATAYAAQLGTMKVTEQIDAITMLRTDP 137 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V+ L+ PR+ A+++ P+ + AI + Y+IP VF++ +++ Sbjct: 138 VQYLVVPRLLAMVVMTPVQCLAFFGVAIWSGQVSSAILYNIPPDVFWTSVRGWMQPSDLP 197 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 L+KA I ++A G +G T VV + V ++D + F Sbjct: 198 AMLLKAGVFGLQIAVIACGWGLTTRGGPKEVGTSTTGAVVMILVTVSLMDVVLTQLLFG 256 >gi|193214677|ref|YP_001995876.1| hypothetical protein Ctha_0964 [Chloroherpeton thalassium ATCC 35110] gi|193088154|gb|ACF13429.1| protein of unknown function DUF140 [Chloroherpeton thalassium ATCC 35110] Length = 248 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 71/245 (28%), Positives = 116/245 (47%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + LG + + ++ QM ++GV +P+V+L+S TGA+ A Sbjct: 4 FTNFFSELGEATLLFWAVLKALPRIFRDRTLVLAQMSHIGVDSLPLVLLVSIFTGAIAAW 63 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q A+Q+ + S + + E+G +LT ++IAGR G++I AE+G+MK+ E+IDA+ Sbjct: 64 QAAYQMKGLAPLSLVGGITSRVIIIELGPVLTGIIIAGRVGASIAAELGTMKVTEQIDAL 123 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M + R L PRI A I +P+L I AN AI+GA IV + I VFF + Sbjct: 124 EIMAISPSRYLAMPRILATTIMMPVLVIFANIIAIVGAFIVSNMFLGISKQVFFDSLKTF 183 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++ L+K+ + GF + +G V S ++++I D Sbjct: 184 FYTGDVVGALVKSGIFGLMTSLAGCHIGFRTDGGAEGVGISTIRSFVVSSAMILIADYFL 243 Query: 365 AIFYF 369 F F Sbjct: 244 WFFLF 248 >gi|254451544|ref|ZP_05064981.1| membrane protein [Octadecabacter antarcticus 238] gi|198265950|gb|EDY90220.1| membrane protein [Octadecabacter antarcticus 238] Length = 258 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 111/254 (43%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + +G + + TG+ + + + + +G +PVV L +F Sbjct: 4 SLASLGAGVLGLLAAVGRLATFTGQTISHLVRPPFYGREFANALLQIGYLSLPVVGLTAF 63 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 TG +A Q ++F AE +++I +RE+G +L +MIA R S+I AEI +MK Sbjct: 64 FTGGALALQIYSGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMK 123 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 + E+IDA+ T+ ++ L PR+ A + +P+L + + I G +V + A Sbjct: 124 VTEQIDALVTLSTHPMKYLTLPRVLAATLVMPILVGVGDIIGIYGGFLVGTERLGFNAAA 183 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 + ++I + L K ++ G + +G+ + VV + + Sbjct: 184 YLQNTADFLEPSDIVSSLAKGAVFGFIAALMGCYYGMNSERGAMGVGRATKSSVVAAAIL 243 Query: 357 VIIIDSLFAIFYFA 370 ++ + L +F+ Sbjct: 244 ILAANFLLTEAFFS 257 >gi|33861880|ref|NP_893441.1| putative transporter, membrane component [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33640248|emb|CAE19783.1| possible transporter, membrane component [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 251 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 59/246 (23%), Positives = 113/246 (45%), Gaps = 3/246 (1%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 L + G+ ++ K L Q+ G + +V++ G V Q A Sbjct: 6 FFKRLVSSLIIGGQAINYIFRGKISKNDLFEQLMESGPGSLVIVLITGIAAGTVFNIQVA 65 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL+ G L+++ RE+ LLTA ++ G+ +A A++G+MK+ E+I+AI + Sbjct: 66 SQLTSMGVSSEIGGLLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTEQIEAITML 125 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS---T 304 + ++ L+ PR+ ++II P+ +L A+ I +Y++P VF++ S + Sbjct: 126 RTEPIQYLVVPRLLSMIIMSPIQCLLFLSVALWSGQIWSTIFYNVPPIVFWTSVRSGNVS 185 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 T +++ + +IK+ I I+A G +G T VV ++ V ++D + Sbjct: 186 LTSSDLSSMIIKSVVFGLLISIIACGYGLTTKGGPKEVGTSTTGAVVMTLVTVSLMDVVL 245 Query: 365 AIFYFA 370 F Sbjct: 246 TQILFG 251 >gi|28199532|ref|NP_779846.1| toluene tolerance protein [Xylella fastidiosa Temecula1] gi|71274637|ref|ZP_00650925.1| Protein of unknown function DUF140 [Xylella fastidiosa Dixon] gi|71899306|ref|ZP_00681467.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1] gi|71899651|ref|ZP_00681805.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1] gi|170730903|ref|YP_001776336.1| toluene tolerance protein [Xylella fastidiosa M12] gi|182682267|ref|YP_001830427.1| hypothetical protein XfasM23_1749 [Xylella fastidiosa M23] gi|28057647|gb|AAO29495.1| toluene tolerance protein [Xylella fastidiosa Temecula1] gi|71164369|gb|EAO14083.1| Protein of unknown function DUF140 [Xylella fastidiosa Dixon] gi|71730603|gb|EAO32680.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1] gi|71730932|gb|EAO33002.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1] gi|167965696|gb|ACA12706.1| toluene tolerance protein [Xylella fastidiosa M12] gi|182632377|gb|ACB93153.1| protein of unknown function DUF140 [Xylella fastidiosa M23] gi|307578543|gb|ADN62512.1| hypothetical protein XFLM_02565 [Xylella fastidiosa subsp. fastidiosa GB514] Length = 249 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 S LG SS + F LIR++Y +G +P++ + G V+ Sbjct: 3 LVSSISSLGRSGLFALTVLRSSLPTRDFFAELIREIYKIGARSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ +GA L+ + RE+ +LTA++ GR+GS++ AE+ M+ ++I A+ Sbjct: 63 QGYRTLTLYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSVAAELSLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D + ++PR WA ++++PLLT + AI I +F+S ++ Sbjct: 123 ELMAIDPIAKAVAPRFWAAVLTVPLLTGVFCSLAICSGYFQAVHVLGIDNGLFWSGLSNS 182 Query: 305 ATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++K+ +VA GF T VV + +V++ + + Sbjct: 183 VDFLEDFGVAMLKSAIFGGTSALVAAYVGFHAQPTIEGTSIATTRAVVNASLLVLMFNFV 242 Query: 364 FAIFYF 369 + F Sbjct: 243 LSALLF 248 >gi|228471177|ref|ZP_04055990.1| conserved hypothetical protein [Porphyromonas uenonis 60-3] gi|228306992|gb|EEK16074.1| conserved hypothetical protein [Porphyromonas uenonis 60-3] Length = 251 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 57/244 (23%), Positives = 116/244 (47%), Gaps = 1/244 (0%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + ++G + K+ F LIR++ G+ + +V++ISF G VI Q Sbjct: 7 NALSVMGEYTLLMAQVFRRPKKWGIFFKQLIREIAKYGLDSIWIVVIISFFIGTVITIQL 66 Query: 187 AFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 + ++ F+ + E + +++AG+ GS+I +E+ +M++ E+IDA+ Sbjct: 67 SINMNSPLIPHFTIGYASREIMFLEFSSSIMCLILAGKVGSSIASELATMRVTEQIDAME 126 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MG++ LI P+I L++ +P+L++++ + ++G + + I + F + Sbjct: 127 IMGVNSANFLILPKILGLMLFIPVLSVISMSTGLVGGYLATYFIPTITPSDFEMGLQTFF 186 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 NIF +IK+ A I A G+ V + +G+ T VV S ++++ D + Sbjct: 187 VTRNIFYSIIKSLVYAFIISSGASYFGYTVKGGALGVGRASTNAVVSSCVLILLADVVLT 246 Query: 366 IFYF 369 F Sbjct: 247 SLLF 250 >gi|332177068|gb|AEE12758.1| protein of unknown function DUF140 [Porphyromonas asaccharolytica DSM 20707] Length = 251 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 118/246 (47%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + ++G + K+ F LIR+M G+ + +V++ISF G VI Sbjct: 5 IGNALSVMGEYTLLMVQVFRRPKKWGIFFKQLIREMAKYGLDSIWIVVIISFFIGTVITI 64 Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + +S F+I + E + +++AG+ GS+I +E+ +M++ E+IDA Sbjct: 65 QLSINMSSPLIPRFTIGYAGREIMFLEFSSSIMCLILAGKVGSSIASELATMRVTEQIDA 124 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I L++ +P+L++++ + ++G + + I + F + Sbjct: 125 MEIMGVNSANFLILPKILGLMLFIPVLSVISMATGLVGGYLATFFIPSITPSDFEMGLQT 184 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + NIF +IK+ A I A G+ V + +G+ T VV S ++++ D + Sbjct: 185 FFVVKNIFYSIIKSLVYAFIISSGASYFGYTVKGGALGVGRASTNAVVSSCVLILLADVV 244 Query: 364 FAIFYF 369 F Sbjct: 245 LTSLLF 250 >gi|268317890|ref|YP_003291609.1| hypothetical protein Rmar_2342 [Rhodothermus marinus DSM 4252] gi|262335424|gb|ACY49221.1| protein of unknown function DUF140 [Rhodothermus marinus DSM 4252] Length = 253 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 116/241 (48%), Gaps = 1/241 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + ++ LG ++ +FK + +L QM +G+ +P+V + + Sbjct: 1 MQSALSRFLLPFRALGQYTLLLVHAFSALGEFKTYRKNLFDQMVRIGIDSIPIVSMAAAF 60 Query: 178 TGAVIAQQGAFQL-SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 +GAV+ Q A+QL S F + +++ + E+ V++T ++AGR G+ I AE+G+M+ Sbjct: 61 SGAVMTVQTAYQLVSPFIPKTVIGAVVAPSMILELAVVVTGFILAGRVGARIAAELGTMR 120 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 + E+IDA+ MGL+ V L+ PR+ A ++ LP+L ++A F I+ +V + Sbjct: 121 VTEQIDALEAMGLNSVSYLVVPRVVAGMVMLPVLYVVACFVGIVSGILVANLGGFLSTGE 180 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 F + G+IKA I ++ +G+ + +G+ T V S Sbjct: 181 FLQGARQFFKPFDPIFGVIKAFVFGFVITSISCYKGYFTQGGAEGVGRSTTQAAVLSCVY 240 Query: 357 V 357 + Sbjct: 241 I 241 >gi|15837022|ref|NP_297710.1| toluene tolerance protein [Xylella fastidiosa 9a5c] gi|9105260|gb|AAF83230.1|AE003893_7 toluene tolerance protein [Xylella fastidiosa 9a5c] Length = 249 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 S LG SS + F LIR++Y +G +P++ + G V+ Sbjct: 3 LVSSISSLGRSGLFALTVLRSSLPTRDFFAELIREIYKIGARSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ +GA L+ + RE+ +LTA++ GR+GS++ AE+ M+ ++I A+ Sbjct: 63 QGYRTLTLYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSVAAELSLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D + ++PR WA I+++PLLT + AI I +F+S ++ Sbjct: 123 ELMAIDPIAKAVAPRFWAAILTVPLLTGVFCSLAICSGYFQAVHVLGIDNGLFWSGLSNS 182 Query: 305 ATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++K+ +VA GF T VV + +V++ + + Sbjct: 183 VDFLEDFGVAMLKSAIFGGTSALVAAYVGFHAQPTIEGTSIATTRAVVNASLLVLMFNFV 242 Query: 364 FAIFYF 369 + F Sbjct: 243 LSALLF 248 >gi|254464755|ref|ZP_05078166.1| membrane protein [Rhodobacterales bacterium Y4I] gi|206685663|gb|EDZ46145.1| membrane protein [Rhodobacterales bacterium Y4I] Length = 260 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 53/254 (20%), Positives = 114/254 (44%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + + + +G + + + ++ + +G +PVV L + Sbjct: 7 LARLGRTALAGLSAVGRAALFALGAFSHMLRPPYYPREVLNSLLNIGWLSLPVVGLTAIF 66 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG +A Q ++F AE +++I +RE+G +L +MIA R S+I AEI +MK+ Sbjct: 67 TGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKV 126 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+ T+ ++ L++PR+ A +I++P+L + + I+G V + A + Sbjct: 127 TEQIDALVTLSTHPMKYLVAPRVLAALITVPVLVGIGDIIGIMGGYTVAVQNLGFNAAAY 186 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 +I + L+K ++ G G + +G+ V + ++ Sbjct: 187 LKNTVDFLEPLDIISSLVKGAAFGTIAAMMGCYYGMQSGRGAQGVGRATKGSVEAAAVLI 246 Query: 358 IIIDSLFAIFYFAI 371 + + + +F++ Sbjct: 247 LAANFVLTGVFFSL 260 >gi|312141010|ref|YP_004008346.1| integral membrane protein yrbe4a [Rhodococcus equi 103S] gi|325675353|ref|ZP_08155037.1| ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] gi|311890349|emb|CBH49667.1| putative integral membrane protein YrbE4A [Rhodococcus equi 103S] gi|325553324|gb|EGD23002.1| ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] Length = 264 Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 56/245 (22%), Positives = 113/245 (46%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 G ++ + +++K I Q +++ + L++ GAV++ Q Sbjct: 14 GALTQAGNIVQLFVDVVRNTFKRPFQFKEFIEQAWFIASVTILPTALVAIPFGAVVSLQT 73 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 + Q GAE F+ + +++ ++TA++IAG +GSA+ A++GS I EEIDA+ Sbjct: 74 GSLIKQLGAESFTGAASVLAVIQQGSPIVTALLIAGAAGSAVTADLGSRTIREEIDAMEV 133 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +G++ V+ L+ PR+ A+++ LL L + I G + + F + A Sbjct: 134 LGINPVQRLVVPRVLAMVLVAVLLNGLVSVVGIAGGYFFNVILQGGTPGAYLASFSALAQ 193 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L +++ +KA G++A +G +G+ V VV + ++ + + + Sbjct: 194 LPDLYIAEVKAAIFGVIAGVIAAYKGLTPKGGPKGVGEAVNQAVVITFLVLFFANLILTM 253 Query: 367 FYFAI 371 Y I Sbjct: 254 VYLQI 258 >gi|194367789|ref|YP_002030399.1| hypothetical protein Smal_4017 [Stenotrophomonas maltophilia R551-3] gi|194350593|gb|ACF53716.1| protein of unknown function DUF140 [Stenotrophomonas maltophilia R551-3] Length = 249 Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG + S + FL L R++Y +G +P++ + G V+ Sbjct: 3 FVQATRSLGRAGLFSLTVLRGSLPTRDFLAELTREIYKIGARSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ FGA L+ + RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ Sbjct: 63 QGYRTLTTFGAADALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D V ++PR WA ++++PLLT + AI + + VF+S + Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGIFCSLAISASYFEAVHVLGLDNGVFWSALRGS 182 Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++K+ +VA GF T VV + +V++ + + Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242 Query: 364 FAIFYF 369 + F Sbjct: 243 LSAMLF 248 >gi|291449028|ref|ZP_06588418.1| ABC-transporter integral membrane protein [Streptomyces roseosporus NRRL 15998] gi|291351975|gb|EFE78879.1| ABC-transporter integral membrane protein [Streptomyces roseosporus NRRL 15998] Length = 253 Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 60/247 (24%), Positives = 108/247 (43%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G + + + ++ + I Q ++V + L+S GAVIA Sbjct: 1 MLAPLRETGKLFALAVAVARAIFRRPFQVREFIEQFWFVASVTILPAALVSIPFGAVIAL 60 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q GA+ F+ + +++ L+ A++I+G +GSAI A++GS KI EE+DA+ Sbjct: 61 QVGSLTQQLGAQSFTGGASVLAVIQQASPLIVALLISGAAGSAICADLGSRKIREELDAM 120 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ ++ L+ PR+ A ++ LL L + +G D + + F + Sbjct: 121 EVMGVSPIQRLVVPRVLATMLVAVLLNGLISVVGTLGGYFFNVIMQDGTPGAYLASFSAL 180 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A L +++ KA GIVA G +G V VV + ++ ++ + Sbjct: 181 AQLPDLYISEFKALIFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFFVNMVL 240 Query: 365 AIFYFAI 371 Y I Sbjct: 241 TAIYLQI 247 >gi|123969056|ref|YP_001009914.1| putative transporter, membrane component [Prochlorococcus marinus str. AS9601] gi|123199166|gb|ABM70807.1| possible transporter, membrane component [Prochlorococcus marinus str. AS9601] Length = 251 Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 111/247 (44%), Gaps = 3/247 (1%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + L + G+ +K K L Q+ G + +V++ G V Q Sbjct: 5 NFFKRLLSSLIIGGQAINFIFKGKISKNDLFDQLMESGPGSLLIVLITGIAAGTVFNIQV 64 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A QL+ G L+++ RE+ LLTA ++ G+ +A A++G+MK+ E+I+AI Sbjct: 65 ASQLTSMGVSSEIGGLLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTEQIEAITM 124 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS--- 303 + + V+ L+ PR+ +++I P+ +L A+ I +Y +P VF++ S Sbjct: 125 LRTEPVQYLVVPRLLSMVIMSPIQCLLFLSVALWSGQIWSTIFYKVPPIVFWTSVRSGNV 184 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + T ++ + LIK+ I I+A G +G T VV ++ V ++D Sbjct: 185 SLTSTDLTSMLIKSVVFGLLISIIACGYGLTTKGGPKEVGTSTTGAVVMTLVTVSLMDVF 244 Query: 364 FAIFYFA 370 F Sbjct: 245 LTQILFG 251 >gi|126696848|ref|YP_001091734.1| putative transporter, membrane component [Prochlorococcus marinus str. MIT 9301] gi|126543891|gb|ABO18133.1| possible transporter, membrane component [Prochlorococcus marinus str. MIT 9301] Length = 251 Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 111/247 (44%), Gaps = 3/247 (1%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + L + G+ +K K L Q+ G + +V++ G V Q Sbjct: 5 NFFKRLLSSLIIGGQAINFIFKGKISKNDLFDQLMESGPGSLLIVLITGIAAGTVFNIQV 64 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A QL+ G L+++ RE+ LLTA ++ G+ +A A++G+MK+ E+I+AI Sbjct: 65 ASQLTSMGVSSEIGGLLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTEQIEAITM 124 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS--- 303 + + V+ L+ PR+ +++I P+ +L A+ I +Y +P VF++ S Sbjct: 125 LRTEPVQYLVVPRLLSMVIMSPIQCLLFLSVALWSGQIWSTIFYKVPPIVFWTSVRSGNV 184 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + T ++ + LIK+ I I+A G +G T VV ++ V ++D Sbjct: 185 SLTSTDLTSMLIKSVVFGLLIAIIACGYGLTTKGGPKEVGTSTTGAVVMTLVTVSLMDVF 244 Query: 364 FAIFYFA 370 F Sbjct: 245 LTQILFG 251 >gi|237712741|ref|ZP_04543222.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262408122|ref|ZP_06084669.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|293369494|ref|ZP_06616073.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f] gi|294644221|ref|ZP_06721991.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a] gi|294808601|ref|ZP_06767341.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b] gi|298480165|ref|ZP_06998363.1| membrane protein [Bacteroides sp. D22] gi|229447218|gb|EEO53009.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262353674|gb|EEZ02767.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292635379|gb|EFF53892.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f] gi|292640431|gb|EFF58679.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a] gi|294444200|gb|EFG12927.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b] gi|298273446|gb|EFI15009.1| membrane protein [Bacteroides sp. D22] Length = 247 Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 114/247 (46%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G G + + + F + ++ +GV+ + +V+LISF GAVI Sbjct: 1 MIKALRTVGRYFMLMGRTFSRPERMRMFFRQYLNELEQLGVNSIGIVLLISFFIGAVITI 60 Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + +++ ++ + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 61 QIKLNIESPWMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I A++ +P+L + F+ IIGA W + Sbjct: 121 LEIMGINSANYLILPKITAMVTVIPILVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQY 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 I+ G+IK+ F A I V+ G+ V S ++GK T VV S +++ D + Sbjct: 181 MFVEWFIWAGIIKSLFFAFIIASVSAFFGYTVDGGSIAVGKASTDAVVSSSVLILFADLI 240 Query: 364 FAIFYFA 370 Sbjct: 241 LTKLLMG 247 >gi|256420257|ref|YP_003120910.1| hypothetical protein Cpin_1211 [Chitinophaga pinensis DSM 2588] gi|256035165|gb|ACU58709.1| protein of unknown function DUF140 [Chitinophaga pinensis DSM 2588] Length = 247 Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 65/243 (26%), Positives = 107/243 (44%), Gaps = 1/243 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 H G + + + F +RQ +G+ + +V++IS G V Q A Sbjct: 5 FFHHFGSYLLMLKGMFSRPENMRMFWKEFMRQCVDIGIGSLGIVLIISMFMGGVTTLQIA 64 Query: 188 FQL-SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 +QL S + ++ + E LT +++AG GS I +E+G+M+++E+IDA Sbjct: 65 YQLISPVIPKSTIAQIVRDTIILEFAPTLTCIVLAGVVGSKIASELGNMRVSEQIDAQEI 124 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG++ LI P+I A II +P L +A F I G + ++ Sbjct: 125 MGINTKGYLIMPKILAAIIMIPCLIAIAGFLGIWGGQKAGELGGILSAEQYWQGLRQDFR 184 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 NIF L KA A I V G+ V + +GK T+ VV + +++ +D L A Sbjct: 185 AYNIFFALFKAFVFAFIIASVPSYYGYNVQGGALEIGKASTSAVVVTCVLILFMDYLLAA 244 Query: 367 FYF 369 Sbjct: 245 LLL 247 >gi|313886966|ref|ZP_07820667.1| conserved hypothetical protein [Porphyromonas asaccharolytica PR426713P-I] gi|312923573|gb|EFR34381.1| conserved hypothetical protein [Porphyromonas asaccharolytica PR426713P-I] Length = 251 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 118/246 (47%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + ++G + K+ F LIR+M G+ + +V++ISF G VI Sbjct: 5 IGNALSVMGEYTLLMVQVFRRPKKWGIFFKQLIREMAKYGLDSIWIVVIISFFIGTVITI 64 Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + +S F+I + E + +++AG+ GS+I +E+ +M++ E+IDA Sbjct: 65 QLSINMSSPLIPRFTIGYAGREIMFLEFSSSIMCLILAGKVGSSIASELATMRVTEQIDA 124 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I L++ +P+L++++ + ++G + + I + F + Sbjct: 125 MEIMGVNSANFLILPKILGLMLFIPVLSVISMATGLVGGYLATFFIPSITPSDFEMGLQT 184 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + NIF +IK+ A I A G+ V + +G+ T VV S ++++ D + Sbjct: 185 FFVVKNIFYSIIKSLVYAFIISSGASYFGYTVKGGALGVGRASTNAVVSSCVLILLADVM 244 Query: 364 FAIFYF 369 F Sbjct: 245 LTSLLF 250 >gi|149278644|ref|ZP_01884780.1| ABC transporter, permease [Pedobacter sp. BAL39] gi|149230639|gb|EDM36022.1| ABC transporter, permease [Pedobacter sp. BAL39] Length = 244 Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats. Identities = 67/239 (28%), Positives = 113/239 (47%), Gaps = 1/239 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL- 190 G I K ++ ++ +QM ++GV + ++ +IS GAV+ Q AFQL Sbjct: 6 FGRYILLLKAVFRKPEKASIYMKAIFKQMDFIGVGSLGLIAIISTFIGAVMTLQIAFQLV 65 Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 S F + + + E+ ++A+++AG+ GSAI +EIG+M+++E+IDA+ MG++ Sbjct: 66 SDFIPKTIIGSVNRDSSILELSPTISAIVLAGKIGSAISSEIGTMRVSEQIDALEIMGIN 125 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 LI P+I A I +PLL I++ F +I G I + A + + I Sbjct: 126 SPGYLILPKIIAGITMVPLLVIMSMFLSITGGYIGGTLSGAVSAAEYVQGITTDFNPYTI 185 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 L+KA I V EGF V + + + T VV S ++ D + Sbjct: 186 VVALVKAFVFGFIITSVPAYEGFYVKGGALEVAQASTRAVVVSCITILACDYIVTQLLL 244 >gi|148241576|ref|YP_001226733.1| ABC-type transport system, permease component [Synechococcus sp. RCC307] gi|147849886|emb|CAK27380.1| ABC-type transport system, permease component [Synechococcus sp. RCC307] Length = 250 Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats. Identities = 62/239 (25%), Positives = 110/239 (46%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG G+ A++ + + + L + G S VV++I G V Q A +L+ Sbjct: 12 LGSSCLIGGQALAAAARGRVPIGELSENLMEAGPSSFLVVLIIGMAAGTVFNIQVAAELT 71 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + GA ++++ REI LLTA+++ G+ +A A +G+MK+ E+IDAI + D Sbjct: 72 KQGAGSTVGGILALGLAREIAPLLTAMLLTGKVATAYAASLGTMKVTEQIDAITMLRTDP 131 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A+++ P+ +L + + Y IP VF+S + +++ Sbjct: 132 VEYLVVPRVIAMLVMSPVQCLLFFGIGMWSGMLSSSMLYRIPPPVFWSSMRTWMQPSDVP 191 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + L+KA I I+A G +G T VV + + I D + + Sbjct: 192 SMLLKATVFGLEIAIIACGWGLTTRGGPKEVGTSTTGAVVMILLTIAITDVILTQVLYG 250 >gi|319788633|ref|YP_004148108.1| hypothetical protein Psesu_3054 [Pseudoxanthomonas suwonensis 11-1] gi|317467145|gb|ADV28877.1| protein of unknown function DUF140 [Pseudoxanthomonas suwonensis 11-1] Length = 249 Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats. Identities = 62/247 (25%), Positives = 110/247 (44%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + LG + +S + FL L R+ Y +G +P++ + G V+ Sbjct: 3 AVGAVRSLGRAGLFSLSVLRASLPSRDFLAELARETYKIGGRSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ FGA L+ + RE+G +LTA++ GR+GS+I AE+G M+ ++I A+ Sbjct: 63 QGYRTLTTFGAADALSTLLGLSLYRELGPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D V ++PR WA ++ +PLLT AI + K + F++ + Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLCVPLLTGFFCSLAISASWFEAVKVLGLDNGTFWAALQGS 182 Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + L+K+ +VA GF T VV + +V++++ + Sbjct: 183 VDFWDDFGVALLKSAVFGGVSALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMLNFV 242 Query: 364 FAIFYFA 370 + F Sbjct: 243 MSALLFQ 249 >gi|91070390|gb|ABE11304.1| putative transporter, membrane component [uncultured Prochlorococcus marinus clone HF10-88H9] Length = 251 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 61/248 (24%), Positives = 111/248 (44%), Gaps = 3/248 (1%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + L + G+ +K K L Q+ G + +V++ G V Q Sbjct: 4 LNFFKRLLSSLIIGGQAINFIFKGKISKNDLFDQLMESGPGSLLIVLITGIAAGTVFNIQ 63 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A QL+ G L+++ RE+ LLTA ++ G+ +A A++G+MK+ E+I+AI Sbjct: 64 VASQLTSMGVSSEIGGLLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTEQIEAIT 123 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS-- 303 + + V+ L+ PR+ +++I P+ +L A+ I +Y +P VF++ S Sbjct: 124 MLRTEPVQYLVVPRLLSMVIMSPIQCLLFLSVALWSGQIWSTIFYKVPPIVFWTSVRSGN 183 Query: 304 -TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + T ++ + LIK+ I I+A G +G T VV ++ V ++D Sbjct: 184 VSLTSTDLTSMLIKSVVFGLLISIIACGYGLTTKGGPKEVGTSTTGAVVMTLVTVSLMDV 243 Query: 363 LFAIFYFA 370 F Sbjct: 244 FLTQILFG 251 >gi|117164593|emb|CAJ88139.1| putative ABC-transporter integral membrane protein [Streptomyces ambofaciens ATCC 23877] Length = 254 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 60/247 (24%), Positives = 108/247 (43%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + + E + ++ + Q +++ + L+S GAVIA Sbjct: 2 ITGALRQTGRLFALAAEVARAIFRRPFQFREFVEQFWFIASVTILPAALVSIPFGAVIAL 61 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q GA+ F+ + +++ L+ A++IAG +GSAI A++GS I EE+DA+ Sbjct: 62 QVGSLTQQLGAQSFTGGASVLAVVQQASPLIVALLIAGAAGSAICADLGSRTIREELDAM 121 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ V+ L+ PR+ A + LL L + I+G + D + S F + Sbjct: 122 EVMGVSPVQRLVVPRVLATMGVAVLLNGLVSVVGILGGYVFNVFLQDGTPGAYLSSFSAL 181 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A L +++ +KA G+VA G +G V VV + ++ ++ + Sbjct: 182 AQLPDLYVSELKALVFGFIAGVVAAYRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMVM 241 Query: 365 AIFYFAI 371 Y + Sbjct: 242 TGVYLQL 248 >gi|239982859|ref|ZP_04705383.1| ABC-transporter integral membrane protein [Streptomyces albus J1074] gi|291454702|ref|ZP_06594092.1| ABC-transporter integral membrane protein [Streptomyces albus J1074] gi|291357651|gb|EFE84553.1| ABC-transporter integral membrane protein [Streptomyces albus J1074] Length = 254 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 60/247 (24%), Positives = 105/247 (42%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + + E + ++ + Q +++ + L+S GAVIA Sbjct: 2 ITGALRQTGRLFALAAEVTRAIFRRPFQFREFVEQFWFIASVTILPAALVSIPFGAVIAL 61 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q GA+ F+ + +++ L+ A++IAG GSAI A++GS KI EE+DA+ Sbjct: 62 QVGSLTQQLGAQSFTGGASVLAVIQQASPLIVALLIAGAGGSAICADLGSRKIREELDAM 121 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ V+ L+ PR+ A + LL + + +G + S F + Sbjct: 122 EVMGVSPVQRLVVPRVLATMSVAVLLNGMVSVVGTLGGYFFNIILQGGTPGAYLSSFSAL 181 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A L +++ +KA GIVA G +G V VV + ++ ++ + Sbjct: 182 AQLPDLYISELKALIFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFFVNMVM 241 Query: 365 AIFYFAI 371 Y I Sbjct: 242 TGLYLQI 248 >gi|229496605|ref|ZP_04390319.1| conserved hypothetical protein [Porphyromonas endodontalis ATCC 35406] gi|229316502|gb|EEN82421.1| conserved hypothetical protein [Porphyromonas endodontalis ATCC 35406] Length = 256 Score = 197 bits (500), Expect = 4e-48, Method: Composition-based stats. Identities = 61/251 (24%), Positives = 118/251 (47%), Gaps = 1/251 (0%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 K + + +G + + ++ F L+R++ +G+ + +V++ISF G Sbjct: 5 KRLGKFTASFRTIGEYTLLMRQVFSRPARWSMFFKQLVREIAKIGLDSILIVMIISFFIG 64 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 VI Q A +S F+I + + L E + +++AG+ GS+I +E+G+M++ Sbjct: 65 TVITIQLAINISSPMIPRFTIGYSTREIVLLEFSSSIMCLILAGKIGSSIASELGTMRVT 124 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 E+IDA+ MG++ LI P+I L++ +P+L+I++ +AI G + W + F Sbjct: 125 EQIDALEVMGINSANFLILPKIIGLLLFIPVLSIISMATAIGGGFLATWLTPSLTAEDFE 184 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 N+ +IK+ A I + G+ V + +G T VV S +++ Sbjct: 185 YGMQLYFNPYNVLYSVIKSLVYAFIITSGSSYFGYNVKGGALGVGVASTNAVVTSSVLIL 244 Query: 359 IIDSLFAIFYF 369 + D L Sbjct: 245 LADVLLTNLLL 255 >gi|328880858|emb|CCA54097.1| putative ABC-transporter integral membrane protein [Streptomyces venezuelae ATCC 10712] Length = 254 Score = 197 bits (500), Expect = 4e-48, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 105/247 (42%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + + E + ++ + Q ++V + L+S GAVIA Sbjct: 2 ITGALRQTGRLFALAAEVSRAVFRRPFQFREFLEQFWFVASVTILPAALVSIPFGAVIAL 61 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q GA+ F+ + +++ L+ A++IAG GSAI A++GS KI EE+DA+ Sbjct: 62 QVGSLTQQLGAQSFTGGASVLAVIQQASPLIVALLIAGAGGSAICADLGSRKIREELDAM 121 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ V+ L+ PR+ A + LL + + +G + S F + Sbjct: 122 EVMGVSPVQRLVVPRVLATMAVAVLLNGMVSVVGTLGGYFFNIILQGGTPGAYLSSFSAL 181 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A L +++ +KA GIVA G +G V VV + ++ ++ + Sbjct: 182 AQLPDLYISELKALIFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFFVNMVL 241 Query: 365 AIFYFAI 371 Y I Sbjct: 242 TGIYLQI 248 >gi|29840386|ref|NP_829492.1| ABC transporter, permease protein, putative [Chlamydophila caviae GPIC] gi|29834735|gb|AAP05370.1| ABC transporter, permease protein, putative [Chlamydophila caviae GPIC] Length = 263 Score = 197 bits (500), Expect = 4e-48, Method: Composition-based stats. Identities = 70/253 (27%), Positives = 117/253 (46%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + C LG + T S K S+ Q Y +GV+ +PVV+L VTG Sbjct: 10 RIFRVLCLFPLELGRWMGFTCAVIKSCSWKKSLFRSVSLQGYDIGVASLPVVMLTGAVTG 69 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A Q +QL G + L EIG +LTA+ ++GR G AI A +G+M++ E Sbjct: 70 IVLALQSYYQLGIHGLSCAIGFFVVKSILVEIGPVLTALALSGRVGGAISAFLGTMRMTE 129 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++ A+ T+G++ + PRI A II++P L I A +S I ++ + +P V+ Sbjct: 130 QVSAMETLGVNPLEYFALPRIIAGIIAMPALVIAAVWSGIFCGYLLCRYAFQLPAQVYLH 189 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 L++I ++K+ I +A +G + K T VV S ++ Sbjct: 190 MVSGNVLLSDIVMVIVKSLVFGFIITSLACYQGLGKHCRITDVAKVTTAGVVTSYISILF 249 Query: 360 IDSLFAIFYFAIG 372 + + F+ +G Sbjct: 250 ANCVITSFFHVLG 262 >gi|254462404|ref|ZP_05075820.1| membrane protein [Rhodobacterales bacterium HTCC2083] gi|206678993|gb|EDZ43480.1| membrane protein [Rhodobacteraceae bacterium HTCC2083] Length = 261 Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats. Identities = 56/239 (23%), Positives = 106/239 (44%) Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G + ++ +L L + VG +PVV L + TG +A Q ++ Sbjct: 23 GRISIYAFSTLHHIFRRPFYLRELGIAILNVGWLSLPVVGLTAVFTGGALALQIYAGGAR 82 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 F AE +++I +RE+G +L +MIA R S+I AEI +MK+ E+IDA+ T+ + Sbjct: 83 FNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQIDALVTLSTHPM 142 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 + L PR+ A +I +P+L + + I+G +V + + ++F+ Sbjct: 143 QYLTVPRVLAGLICVPVLVGVGDVIGILGGYLVATGTLEFNSTTYLVNTFDFLEPRDVFS 202 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 L K ++ G G + +G V + +++ + + +F+I Sbjct: 203 SLAKGAVFGTIATLMGCYYGMNSGRGAQGVGAATKGSVEAAAILILAANFVLTGVFFSI 261 >gi|325300148|ref|YP_004260065.1| hypothetical protein Bacsa_3064 [Bacteroides salanitronis DSM 18170] gi|324319701|gb|ADY37592.1| protein of unknown function DUF140 [Bacteroides salanitronis DSM 18170] Length = 246 Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 1/241 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG I G + + + + + +M +G++ + +V+LISF GAVI Q Sbjct: 5 ISTLGKYIMLMGRVFSRPERVRMYFKQYVNEMAQLGINSIGIVLLISFFIGAVICIQIKL 64 Query: 189 QLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + F + + + L E + +++AG+ GS I +E+G+M++ ++IDA+ M Sbjct: 65 NIESPWMPRFVVGYTTREILLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIM 124 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ LI P+I LI +P+L + F+ +IGA W + Sbjct: 125 GVNSASYLILPKILGLITMIPVLVTFSIFAGVIGAFCTAWFAGIMNATDLEYGIQYCFVE 184 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ IK+ F A I V+ G+ V S ++GK T VV S +++ D + Sbjct: 185 WYVWCSFIKSFFFAFIISSVSAFFGYTVEGGSIAVGKASTDAVVSSSVLILFSDLILTKL 244 Query: 368 Y 368 Sbjct: 245 L 245 >gi|255014836|ref|ZP_05286962.1| ABC transporter permease [Bacteroides sp. 2_1_7] Length = 241 Score = 196 bits (499), Expect = 5e-48, Method: Composition-based stats. Identities = 64/240 (26%), Positives = 116/240 (48%), Gaps = 2/240 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G + ++ F LI+++Y +GV + +VI+IS G VIA Q + +S Sbjct: 1 MGEYTLLMMKSITLPDRWSMFFKQLIKEIYKLGVDSLWIVIIISVFIGTVIAIQISLNIS 60 Query: 192 QFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 F+I + + L E + A+++AG+ GS I +EIG+M++ E+IDA+ MG++ Sbjct: 61 SPLIPKFTIGYTTREIILLEFSSSIMALILAGKVGSNIASEIGTMRVTEQIDAMEIMGVN 120 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY-DIPFAVFFSRFHSTATLAN 309 LI P++ L+I +P+L I + F+ I+G + + + F Sbjct: 121 SANFLILPKMLGLMIFIPVLVIFSMFTGIMGGIFASYSTSTGMTPSSFEYGLQFYFNEFY 180 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 I+ +IK+ A I +A G+ V + +GK T VV S ++++ D + Sbjct: 181 IWYSIIKSVVYAFIISSIAAYFGYNVKGGALEVGKASTNAVVMSSIMILLADVILTHLML 240 >gi|296114211|ref|ZP_06832866.1| ABC transporter permease protein [Gluconacetobacter hansenii ATCC 23769] gi|295979287|gb|EFG86010.1| ABC transporter permease protein [Gluconacetobacter hansenii ATCC 23769] Length = 261 Score = 196 bits (499), Expect = 5e-48, Method: Composition-based stats. Identities = 64/264 (24%), Positives = 126/264 (47%), Gaps = 7/264 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + IG+ ++ + + A + + ++ F SLI +G Sbjct: 4 ILDFIAGIGRTLLDMVRMAGQVALFG---LLAVSHLVRPPFYWRTFCGSLIE----IGYF 56 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PVV L + +G VIA Q +Q+ A+ ++ + RE+G +L +M+AGR G+ Sbjct: 57 SLPVVALTALFSGGVIALQSYTGFAQYHAQSAIAGIVILAVTRELGPVLAGLMVAGRVGA 116 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG+M++ +IDA+ T+ + ++ L++PR+ A ++LP L I+A+ ++G IV Sbjct: 117 AMSAEIGTMRVTNQIDALSTLSTNPIKYLVTPRLLAGTLALPFLVIIADILGVMGGFIVC 176 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + + S ++ + ++ GL KA I ++ G+ + +G Sbjct: 177 VMKLNFVPQAYISATIASFRMMDVTVGLAKAAIFGFLIALMGCYHGYHSRGGAEGVGAAT 236 Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370 T VV + +++ D L +F+ Sbjct: 237 TAAVVAASILLLTFDYLLTDVFFS 260 >gi|162146610|ref|YP_001601069.1| hypothetical protein GDI_0788 [Gluconacetobacter diazotrophicus PAl 5] gi|161785185|emb|CAP54731.1| putative membrane protein [Gluconacetobacter diazotrophicus PAl 5] Length = 373 Score = 196 bits (499), Expect = 5e-48, Method: Composition-based stats. Identities = 78/346 (22%), Positives = 147/346 (42%), Gaps = 13/346 (3%) Query: 31 INKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY---HGKIKLQGVSTHIEQLFSLISF 87 + ++ A+ DT + ++ H ++ + +L L+ Sbjct: 38 LRQAAPGRPLTFRSDALGRWDTGLIAFLWDLKQRATQAHLDLRTDTLPDSARKLLDLL-- 95 Query: 88 THRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSY 147 P +G ++ + + + + E Sbjct: 96 ------PEAPPPPPTPRPRTFAPVTALGAFTIESLTEIGTVTELGVETARGGLEAVTGRG 149 Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 + + + L+ + G S + +V +++F+ GA++A GA QL +F A+I+ L+ I Sbjct: 150 RMRS--IDLMSNIRDAGPSALLIVSVVNFLVGAILAFVGAVQLRKFAADIYVASLVGIAM 207 Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267 +RE+ ++TA+++AGR+G A A I +M+ NEEIDA+ G+ LI P I L+ ++ Sbjct: 208 VREMSAVMTAIIMAGRTGGAYAARIATMQGNEEIDALTVFGIPVSSYLILPSILGLVATM 267 Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327 P L + ++G V + A +F + + L G IK+ F A IG+ Sbjct: 268 PFLYLYGCLIGMLGGFTVAISMLAVTGAGYFHQTINAVGLNQFEFGFIKSIFFAILIGLT 327 Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + + G G + +G T VV I VI +D++FA+ +GI Sbjct: 328 SCRIGLRSGRSAADVGVAATRAVVVGIVGVITLDAIFAVIATTLGI 373 >gi|227538358|ref|ZP_03968407.1| ABC superfamily ATP binding cassette transporter permease protein [Sphingobacterium spiritivorum ATCC 33300] gi|300774198|ref|ZP_07084065.1| ABC superfamily ATP binding cassette transporter permease protein [Sphingobacterium spiritivorum ATCC 33861] gi|227241873|gb|EEI91888.1| ABC superfamily ATP binding cassette transporter permease protein [Sphingobacterium spiritivorum ATCC 33300] gi|300758877|gb|EFK55706.1| ABC superfamily ATP binding cassette transporter permease protein [Sphingobacterium spiritivorum ATCC 33861] Length = 252 Score = 196 bits (498), Expect = 6e-48, Method: Composition-based stats. Identities = 65/237 (27%), Positives = 110/237 (46%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + F + +IRQ Y +G +P++ + F+ G V Sbjct: 3 NKVRNLLIEFANIHRFLMRFLKEVVSPPFEIKEIIRQCYEIGWRSLPLISVTGFIVGFVF 62 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 +Q L +FGA + L+SI +R + L+TA++ +G+ GS I AE+ SM + E+ID Sbjct: 63 TKQSRPSLEEFGATSWLPSLISIAIIRALAPLVTALIASGKVGSQIGAELSSMNVTEQID 122 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ G + + LI R+WA I +P+L ++G + I D+ F FF++ Sbjct: 123 AMEVSGTNPFKFLIVSRVWATTIGIPILCFYTAGIGLLGGYLSIASKDDVSFLSFFTQVF 182 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 +IF + +A IG V+ G+ + +GK + VV S+ IV I Sbjct: 183 EAIAYKDIFAMVFRAVVFGFTIGAVSSYCGYFSSKGTEGVGKAANSAVVASMFIVFI 239 >gi|262195117|ref|YP_003266326.1| hypothetical protein Hoch_1886 [Haliangium ochraceum DSM 14365] gi|262078464|gb|ACY14433.1| protein of unknown function DUF140 [Haliangium ochraceum DSM 14365] Length = 328 Score = 196 bits (498), Expect = 6e-48, Method: Composition-based stats. Identities = 58/266 (21%), Positives = 108/266 (40%) Query: 98 PQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLI 157 P + S + + LG I + + L + + Sbjct: 46 PAEATAEESEGGFKRAVFTGVRDAFAPVPRFLDRLGEHIILAVRALSWLPRRPLRLANYL 105 Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 Y+G +P+++L+ TGAV+A Q F FG E + E+ +L A Sbjct: 106 DAAEYIGFGSLPIILLVGLFTGAVMALQSVFAFRDFGLESMVGGVTGKALATELAPVLAA 165 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +M+ GR+ + I E+G+M+I+E+IDA+ +M ++ ++ L+ PR+ A P+LT++ Sbjct: 166 LMLTGRAAAGIATELGTMRISEQIDALESMAVNPIQFLVLPRLVAGFFMAPILTLIFFVI 225 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 + GA V + F ++ G++K+ + ++ +GF Sbjct: 226 GMGGAYFVSVISEGVDHGQFVHNTKDILNFVDVLQGILKSAVFGFVVVLIGCYQGFFASG 285 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSL 363 +G T VV V+I D Sbjct: 286 GGRGVGLGTTRAVVIGSVTVLITDYF 311 >gi|326382581|ref|ZP_08204272.1| hypothetical protein SCNU_06565 [Gordonia neofelifaecis NRRL B-59395] gi|326198700|gb|EGD55883.1| hypothetical protein SCNU_06565 [Gordonia neofelifaecis NRRL B-59395] Length = 281 Score = 195 bits (497), Expect = 7e-48, Method: Composition-based stats. Identities = 59/245 (24%), Positives = 109/245 (44%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + L + + K + IRQ ++ + V +L++ G +++ Q Sbjct: 31 TFGRQLAMFVEVFKVLIEDILKKRFPFGEFIRQCAFMASTSVFPTLLVAIPIGVIVSIQV 90 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 + Q GA FS + +R+ L+T++++AG GSAI A++GS I EEIDA+R Sbjct: 91 SNIAGQIGATSFSGAATGLGVIRQGAPLVTSLLLAGAVGSAIAADLGSRTIREEIDAMRV 150 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG++ ++ LISPR+ A ++ LL F I + + + F S A Sbjct: 151 MGVNPIQRLISPRLLATMVVSFLLCGFVCFVGFITGYLFNVYFQGGTPGSYTGTFASFAG 210 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + ++ L+KA + IVA G + + V VV S+ ++ ++ + Sbjct: 211 VPDLLFALVKAVIFGAIVAIVACDRGLSTSGGPAGVANSVNAAVVNSVILLFTVNVVLTQ 270 Query: 367 FYFAI 371 + + Sbjct: 271 VFALV 275 >gi|157413886|ref|YP_001484752.1| putative transporter, membrane component [Prochlorococcus marinus str. MIT 9215] gi|254526072|ref|ZP_05138124.1| ABC-type transport system involved in resistance to organic solvents permease component [Prochlorococcus marinus str. MIT 9202] gi|157388461|gb|ABV51166.1| possible transporter, membrane component [Prochlorococcus marinus str. MIT 9215] gi|221537496|gb|EEE39949.1| ABC-type transport system involved in resistance to organic solvents permease component [Prochlorococcus marinus str. MIT 9202] Length = 251 Score = 195 bits (497), Expect = 7e-48, Method: Composition-based stats. Identities = 62/238 (26%), Positives = 111/238 (46%), Gaps = 3/238 (1%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + G+ +K K L Q+ G + +V++ G V Q A QL+ G Sbjct: 14 LVIGGQAINFIFKGKISKNDLFEQLMESGPGSLLIVLITGIAAGTVFNIQVASQLTSMGV 73 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 L+++ RE+ LLTA ++ G+ +A A++G+MK+ E+I+AI + + V+ L Sbjct: 74 SSEIGGLLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTEQIEAITMLRTEPVQYL 133 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS---TATLANIFT 312 + PR+ +++I P+ +L A+ I +Y +P VF++ S + T A++ + Sbjct: 134 VVPRLLSMVIMSPIQCLLFLSVALWSGQIWSTIFYKVPPIVFWTSVRSGNVSLTSADLTS 193 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 LIK+ I I+A G +G T VV ++ V ++D L F Sbjct: 194 MLIKSVVFGLLISIIACGYGLTTKGGPKEVGTSTTGAVVMTLVTVSLMDVLLTQILFG 251 >gi|317125894|ref|YP_004100006.1| hypothetical protein Intca_2778 [Intrasporangium calvum DSM 43043] gi|315589982|gb|ADU49279.1| protein of unknown function DUF140 [Intrasporangium calvum DSM 43043] Length = 256 Score = 195 bits (497), Expect = 7e-48, Method: Composition-based stats. Identities = 63/239 (26%), Positives = 115/239 (48%) Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G + + + + + + I+Q +++ + L+S GAVIA Q Q Sbjct: 13 GSLFALALDVLRALPRRPFQVKEFIQQSWFLASVTILPTALVSIPFGAVIALQLGTLTRQ 72 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 GA+ ++ + LRE ++TA++IAG GSAI A++GS KI EEIDA+ +G+ + Sbjct: 73 LGAQSYTGAASVLAVLREASPIVTALLIAGAGGSAICADLGSRKIREEIDAMEVLGISPI 132 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 + L+ PR+ A ++ LL L + ++G + + + F + A L +++ Sbjct: 133 QRLVVPRVLASMLVAVLLNGLVSVVGVVGGYVFNVIVQGGTPGAYIASFTAMAQLPDLWA 192 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 G +KA GIVA +G G +G V VV + ++ +++ + YF + Sbjct: 193 GELKALVFGAIAGIVAAHKGLTAGGGPKGVGDAVNQSVVITFMLLFVVNFVITAVYFQV 251 >gi|254436878|ref|ZP_05050372.1| conserved hypothetical protein [Octadecabacter antarcticus 307] gi|198252324|gb|EDY76638.1| conserved hypothetical protein [Octadecabacter antarcticus 307] Length = 258 Score = 195 bits (497), Expect = 7e-48, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 110/254 (43%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + +G + + TG+ + + + + +G +PVV L +F Sbjct: 4 ALASLGAAFLGLLAAIGRLATFTGQTISHLVRPPFYGREFATALLQIGYFSLPVVGLTAF 63 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 TG +A Q ++F AE +++I +RE+G +L +MIA R S+I AEI +MK Sbjct: 64 FTGGALALQIYSGGARFSAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMK 123 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 + E+IDA+ T+ ++ L PR+ A + +P+L + + I G +V + A Sbjct: 124 VTEQIDALVTLSTHPMKYLTLPRVLAATLVMPILVGVGDIIGIYGGFLVGTERLGFNAAA 183 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 + +I + L K ++ G + +G+ + VV + + Sbjct: 184 YLQNTVDFLEPRDIISSLAKGAVFGFIAALMGCYHGMNSERGAMGVGRATKSSVVAAAIL 243 Query: 357 VIIIDSLFAIFYFA 370 ++ + L +F+ Sbjct: 244 ILAANFLLTEAFFS 257 >gi|163732016|ref|ZP_02139462.1| hypothetical protein RLO149_01157 [Roseobacter litoralis Och 149] gi|161394314|gb|EDQ18637.1| hypothetical protein RLO149_01157 [Roseobacter litoralis Och 149] Length = 256 Score = 195 bits (497), Expect = 7e-48, Method: Composition-based stats. Identities = 54/247 (21%), Positives = 108/247 (43%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G + G+ + + + + Q+ +G +PVV L + TG +A Sbjct: 10 IMGALAAIGRIAIFGGQCISHLVRPPFYGREFVTQLVNIGWLSLPVVGLTALFTGGALAL 69 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q S+F AE ++++ +RE+G +L +MIA R S+I AEI +MK+ E+IDA+ Sbjct: 70 QIYAGGSRFNAESVVPQIVAVGMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQIDAL 129 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 T+ ++ L PR+ A ++ +PLL + + I G V A + + + Sbjct: 130 VTLSTHPMKYLTVPRVLAAVLVVPLLVAIGDIIGIFGGYAVATGTLGFNAATYINNTVNF 189 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++ + L K ++ G G + +G+ V + +++ + + Sbjct: 190 LEPLDVISSLTKGAVFGFCAALMGCYHGMNSGRGAMGVGRATKGAVEGAAILILAANFVL 249 Query: 365 AIFYFAI 371 +F + Sbjct: 250 TGVFFTL 256 >gi|300784333|ref|YP_003764624.1| ABC transporter permease [Amycolatopsis mediterranei U32] gi|299793847|gb|ADJ44222.1| ABC transport system permease protein [Amycolatopsis mediterranei U32] Length = 262 Score = 195 bits (497), Expect = 8e-48, Method: Composition-based stats. Identities = 60/245 (24%), Positives = 116/245 (47%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + +G + + + E + +K I+Q ++ + L++ GAVIA Q Sbjct: 12 AALTQVGRLATLSWEVLRAIFKRPFQAREWIQQCWFFASVTILPTALVAIPFGAVIALQL 71 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 +Q GA+ F+ ++ +++ L+TA+++AG GSA+ A+IG+ KI EEIDA+ Sbjct: 72 GSLTAQIGAQSFTGAASALAIVQQASPLITALLVAGAGGSAVCADIGARKIREEIDAMEV 131 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +G++ ++ LI PR+ A ++ LL L + ++G + + F++ A Sbjct: 132 LGVNPIQRLIVPRVLAAMVVSVLLNGLVSVVGVLGGYFFNVVLQGGTPGAYLASFNALAQ 191 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + +++ IKA G+VA G +G V VV + ++ +I+ + Sbjct: 192 VPDLWVSEIKALLYGFVAGVVAAFRGLNPAGGPKGVGDAVNQAVVITFLLLFLINVVLTA 251 Query: 367 FYFAI 371 Y I Sbjct: 252 IYLRI 256 >gi|262202881|ref|YP_003274089.1| hypothetical protein Gbro_2988 [Gordonia bronchialis DSM 43247] gi|262086228|gb|ACY22196.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247] Length = 285 Score = 195 bits (497), Expect = 8e-48, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 110/245 (44%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + +G+ + +K + IRQ ++ + V +L++ G +++ Q Sbjct: 35 TFGRQMGMFVEVFKVLFVDIFKRRFPFGEFIRQCAFMSSTSVFPTLLVAIPIGVIVSIQV 94 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 + Q GA FS + +R+ L+T++++AG GSAI A++GS I +EIDA+R Sbjct: 95 SNIAGQIGATSFSGAATGLGVIRQGAPLVTSLLLAGAVGSAIAADLGSRTIRDEIDAMRV 154 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG++ ++ LISPR+ A ++ LL F I + + F S A+ Sbjct: 155 MGVNPIQRLISPRLLATMVVSFLLCGFVCFVGFITGYAFNVYFQGGTPGSYTGTFASFAS 214 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 +++ L KA + +VA G + + V VV S+ ++ ++ + Sbjct: 215 TSDLLFALGKAVIFGAIVAVVACDRGLSTKGGPAGVANSVNAAVVNSVLLLFTVNVILTQ 274 Query: 367 FYFAI 371 + + Sbjct: 275 LFAIL 279 >gi|291298382|ref|YP_003509660.1| hypothetical protein Snas_0856 [Stackebrandtia nassauensis DSM 44728] gi|290567602|gb|ADD40567.1| protein of unknown function DUF140 [Stackebrandtia nassauensis DSM 44728] Length = 253 Score = 195 bits (497), Expect = 8e-48, Method: Composition-based stats. Identities = 57/247 (23%), Positives = 111/247 (44%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G T + + + I+Q +++ + L++ GAVIA Sbjct: 1 MGRMFAGVGRFTGFTIDTFKAVPRRPFQWSEAIKQAWFIASVSILPTALVAIPFGAVIAL 60 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q GAE F+ + +RE G ++TA++I+G GSA+ A++G+ KI EE+DA+ Sbjct: 61 QLGSLSKQIGAESFAGAASVLAVVREAGPIVTALLISGAGGSAMCADLGARKIREELDAM 120 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 T+G+D ++ L+ PR++A + L + + I G I D + + F + Sbjct: 121 ETLGVDPIQRLVVPRMFAGAVVAFFLNGVVSAVGIAGGYIFNVYMQDGTPGSYLASFAAL 180 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +A++ + ++A ++A G +G+ V VV + ++ + + Sbjct: 181 GQVADVVSAQLRAIVFGMVAALIACYLGMNAKGGPKGVGQAVNVSVVVNFMVLFAFNFVM 240 Query: 365 AIFYFAI 371 YF + Sbjct: 241 VALYFQL 247 >gi|258541792|ref|YP_003187225.1| ABC transporter permease [Acetobacter pasteurianus IFO 3283-01] gi|256632870|dbj|BAH98845.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-01] gi|256635927|dbj|BAI01896.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-03] gi|256638982|dbj|BAI04944.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-07] gi|256642036|dbj|BAI07991.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-22] gi|256645091|dbj|BAI11039.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-26] gi|256648146|dbj|BAI14087.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-32] gi|256651199|dbj|BAI17133.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654190|dbj|BAI20117.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-12] Length = 261 Score = 195 bits (497), Expect = 8e-48, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 125/264 (47%), Gaps = 7/264 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 +L +G+ + I + + A S + + FL + + G Sbjct: 4 VLDLVARLGRATLSLIRAAGALAL---FAASGLSHIVRPPFYGRVFLSTFLE----TGFF 56 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PVV L + +G VIA Q +Q+ A+ ++ + RE+G +L +M+AGR G+ Sbjct: 57 SLPVVALTALFSGGVIALQSYTGFAQYHAQSAIAGIVVLAVTRELGPVLAGLMVAGRVGA 116 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ A+IG+M++ ++IDA+ T+ + ++ L++PR+ A +I+LPLL ++A+ + G V Sbjct: 117 AMAAQIGTMRVTDQIDALTTLSTNPMKYLVAPRLLAGLIALPLLVLVADILGVAGGFTVA 176 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + + ++ ++ GL+KA I ++ G+ + +G Sbjct: 177 VVKLGFSAPAYITATLNSLKAIDVTVGLVKAALFGFLIALMGCYYGYNSKGGAEGVGSAT 236 Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370 T VV + +++ D L +F+ Sbjct: 237 TAAVVAASIMLLAFDYLLTDLFFS 260 >gi|261415260|ref|YP_003248943.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371716|gb|ACX74461.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327576|gb|ADL26777.1| putative membrane protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 261 Score = 195 bits (496), Expect = 9e-48, Method: Composition-based stats. Identities = 69/263 (26%), Positives = 130/263 (49%), Gaps = 7/263 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + +G+ + +F+N + + N + L + + QM++VG++ Sbjct: 5 INKIAEGLGRAVRRFLNKVVGYVLFIWELFKNIPGAFTN-------LHTTVEQMHHVGIT 57 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PVV S TGA+++ Q A+Q +F + + E+ +LTA+++AGR G+ Sbjct: 58 SIPVVFAASLATGAIMSWQLAYQFGDMIPMMFVGMAVGKSVMVELCPILTAMVLAGRIGA 117 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 ++ +E+G+M + E++DA + +GL+ + L++PR+ A +I LP+LTIL+ F I+G V Sbjct: 118 SMCSELGTMAVTEQLDAYKVLGLNPYKYLLAPRLIATVIMLPVLTILSIFIGIVGGYEVA 177 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 Y ++ ++VFF ++ GLIKA I A GF + +GK Sbjct: 178 HLYKEVSWSVFFYGVRMFYQNWDLVVGLIKATLYGFFISSYACFFGFFTHSGAEGVGKST 237 Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369 VV ++ ++I + Sbjct: 238 KATVVAGMTSILIGGFTLSKLLL 260 >gi|302525560|ref|ZP_07277902.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4] gi|302434455|gb|EFL06271.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4] Length = 267 Score = 195 bits (496), Expect = 9e-48, Method: Composition-based stats. Identities = 58/245 (23%), Positives = 116/245 (47%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + +G + + + E + +K I+Q ++ + L++ GAVIA Q Sbjct: 17 AALTQVGRLATLSWEVLRAIFKRPFQFREWIQQCWFFASVTILPTALVAIPFGAVIALQL 76 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 +Q GA+ F+ ++ +++ L+TA+++AG GSA+ A+IG+ KI EEIDA+ Sbjct: 77 GSLTTQIGAQSFTGAASALAIVQQASPLITALLVAGAGGSAVCADIGARKIREEIDAMEV 136 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +G++ ++ ++ PR+ A I+ LL L + ++G + + F++ A Sbjct: 137 LGVNPIQRIVVPRVLAAIVVSVLLNGLVSVVGVLGGYFFNVVLQGGTPGAYLASFNALAQ 196 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + +++ IKA G+VA G +G V VV + ++ +I+ + Sbjct: 197 VPDLWISEIKAFLYGFVAGVVAAFRGLNPAGGPKGVGDAVNQAVVITFLLLFLINVVLTA 256 Query: 367 FYFAI 371 Y + Sbjct: 257 VYLKV 261 >gi|162146934|ref|YP_001601395.1| hypothetical protein GDI_1139 [Gluconacetobacter diazotrophicus PAl 5] gi|209543998|ref|YP_002276227.1| hypothetical protein Gdia_1852 [Gluconacetobacter diazotrophicus PAl 5] gi|161785511|emb|CAP55082.1| putative membrane protein [Gluconacetobacter diazotrophicus PAl 5] gi|209531675|gb|ACI51612.1| protein of unknown function DUF140 [Gluconacetobacter diazotrophicus PAl 5] Length = 261 Score = 195 bits (496), Expect = 1e-47, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 128/266 (48%), Gaps = 7/266 (2%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 N+ + +G+ + + + + +S+ + ++ F +L+ +G Sbjct: 2 NAVLDFIAALGRAALNLVRTAGALTLFGAQALSH---LVRPPFYWRIFFGALVE----IG 54 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 +PVV L + +G VIA Q +Q+ + ++ + RE+G +L +M+AGR Sbjct: 55 FFSLPVVALTALFSGGVIALQSYTGFAQYHVQSAIAGIVVLAVTRELGPVLAGLMVAGRV 114 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 G+A+ AEIG+M++ ++IDA+ T+ + ++ L++PR+ A ++LP L ++A+ ++G Sbjct: 115 GAAMAAEIGTMRVTDQIDALTTLSTNPMKYLVTPRLLAGTLALPCLVLVADILGVLGGFT 174 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 V D V+ + + ++ GL+KA I ++ G+ + +G Sbjct: 175 VSVAKLDFSAPVYIAATFAAVKPIDVTVGLVKAGVFGFLIALMGCYHGYNSRGGAEGVGA 234 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + +++ D L +F+ Sbjct: 235 ATTAAVVAASILLLASDYLLTDVFFS 260 >gi|330991409|ref|ZP_08315360.1| putative ABC transporter permease protein [Gluconacetobacter sp. SXCC-1] gi|329761428|gb|EGG77921.1| putative ABC transporter permease protein [Gluconacetobacter sp. SXCC-1] Length = 261 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 130/266 (48%), Gaps = 7/266 (2%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 N + +G+ ++ + + A +S+ + ++ +L+ +G Sbjct: 2 NGVLDFVAGLGRAVLDIVRMAGKVALFAARALSHV---VRPPFYWRILWGTLVE----IG 54 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 +PVV L + +G VIA Q +Q+ A+ ++ + RE+G +L +M+AGR Sbjct: 55 FFSLPVVALTALFSGGVIALQSYTGFAQYHAQNAIAGIVILAVTRELGPVLAGLMVAGRV 114 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 G+A+ AEIG+M++ ++IDA+ T+ + ++ L++PR+ A ++LP L ++A+ ++G Sbjct: 115 GAAMSAEIGTMRVTDQIDALSTLSTNPMKYLVTPRLVAGTLALPFLVLVADILGVLGGFT 174 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 V D + + + ++ + ++ GL+KA I ++ G+ + +G Sbjct: 175 VCVMKLDFSPSAYIAATIASLKVMDVTVGLVKAAIFGFLIALMGCYHGYNSRGGAEGVGA 234 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + +++ D L +F+ Sbjct: 235 ATTAAVVAASILLLTFDYLLTDVFFS 260 >gi|261415153|ref|YP_003248836.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371609|gb|ACX74354.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp. succinogenes S85] gi|302325884|gb|ADL25085.1| putative ABC transporter, permease protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 260 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 7/263 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 IG+KIV I IL + + + ++++M VGVS Sbjct: 4 ILKPITWIGQKIVDAIAAVGECICILFITLKQFRYVHKNP-------SLIVKEMISVGVS 56 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +P++ + S TG V F+ ++ F + L E+G LLTA++++GR GS Sbjct: 57 SLPLLFVTSIFTGMVATIMAEFEFHNLVSDKFVGTAACKMVLIELGPLLTAIVLSGRVGS 116 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AE+GSMK EE+ A +GLD R L PR +A + +P LT ++N A+IG IV Sbjct: 117 AVAAELGSMKEKEELSAYVVLGLDPYRYLAMPRFFAFLTMIPCLTAISNALALIGGWIVC 176 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 DI + + + +++ G+IK+ I ++A G ++ +G Sbjct: 177 VLALDITTYTYSTGMQYLFSNMDLWAGIIKSIVFGTIIFVLAYYHGTHSKPGAHGVGLAT 236 Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369 + VV S ++++ D + F F Sbjct: 237 MSVVVASCLMILVSDFILDAFMF 259 >gi|311741974|ref|ZP_07715784.1| ABC superfamily ATP binding cassette transporter membrane protein [Aeromicrobium marinum DSM 15272] gi|311314467|gb|EFQ84374.1| ABC superfamily ATP binding cassette transporter membrane protein [Aeromicrobium marinum DSM 15272] Length = 288 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 112/279 (40%), Gaps = 2/279 (0%) Query: 95 NQKPQRSFFYNSFKNLHYHIGKKIVKF--INDSCSQAHILGLVISNTGEFCASSYKFKGF 152 + +P+ I ++ + F S ++G + G+ + + + Sbjct: 7 SSRPEGDTPNEPTPPTRAEIEREALTFNPFAKVLSGFGLVGNFYNFCGKTFRTMFTRRPV 66 Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 + +++Q +++ + I++S +I Q L Q GA + ++ +REIG Sbjct: 67 VDEIVQQAWFISSVSIMPAIMVSIPLCMIIVFQVNQLLIQIGAVDLAGAGAAVAVIREIG 126 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 +++ +++AG +A+ A++G+ KI +EIDA+ T+G+D + L+ PR+ A L Sbjct: 127 PIVSVLVVAGAGATAVCADLGARKIRDEIDAMETLGIDPIHRLVVPRVIASTFIAVALNG 186 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 + + + GA +F + + +KA G+ G Sbjct: 187 MVSIVGLAGAYYFSVVLQGATPGLFIDGLTLLVGTPDFWASSLKAAIFGLLAGLAGCYLG 246 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +G V VV + ++ +++ + + Sbjct: 247 LNAKGGPKGVGDAVNQTVVLAFLMLFAANTVITTIFLQL 285 >gi|257054442|ref|YP_003132274.1| ABC-type transport system involved in resistance to organic solvents, permease component [Saccharomonospora viridis DSM 43017] gi|256584314|gb|ACU95447.1| ABC-type transport system involved in resistance to organic solvents, permease component [Saccharomonospora viridis DSM 43017] Length = 250 Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats. Identities = 54/244 (22%), Positives = 110/244 (45%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 G + + + ++ I+Q +++ + L++ GAVI+ Q Sbjct: 1 MLRETGKLFALALDVARGVFRRPFQFREFIQQAWFIASVTILPTALVAIPFGAVISMQFG 60 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 Q GA+ ++ + +++ L+ A+++AG GSAI A+IG+ I EEIDA+ + Sbjct: 61 SLAKQLGAQSYTGAGSVLATVQQASPLVVALLVAGAGGSAICADIGARTIREEIDAMEVL 120 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ V+ L+ PR+ A + LL + + ++G D + + F + A L Sbjct: 121 GVSAVQRLVVPRVLACMFVALLLNGMVSVIGVLGGYFFNVVLQDGTPGAYLASFSALAQL 180 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++++ G IKA +VA G +G V VV + ++ +++++ + Sbjct: 181 SDLWIGEIKALIFGFIAAVVAAYRGLNPPPGPKGVGDAVNQSVVITFLLLFVVNTVLTLI 240 Query: 368 YFAI 371 Y + Sbjct: 241 YLQL 244 >gi|294632699|ref|ZP_06711258.1| YrbE family protein [Streptomyces sp. e14] gi|292830480|gb|EFF88830.1| YrbE family protein [Streptomyces sp. e14] Length = 254 Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 104/247 (42%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + + E + ++ + Q +++ + L+S GAVIA Sbjct: 2 ITGALRQTGRLFALAAEVGRAIFRRPFQAREFVEQFWFLASVTILPAALVSIPFGAVIAL 61 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q GA+ F+ + +++ L+ A++I+G GSAI A++GS I EE+DA+ Sbjct: 62 QVGSLTQQLGAQSFTGGASVLAVVQQASPLIVALLISGAGGSAICADLGSRTIREELDAM 121 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ V+ L+ PR+ A + LL L + I+G + S F S Sbjct: 122 EVMGVSPVQRLVVPRVLAAMGVAVLLNGLVSVVGILGGYFFNVYLQHGTPGAYVSSFSSL 181 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A L +++ KA GIVA G +G V VV + ++ ++ + Sbjct: 182 AQLPDLYVSEFKALVFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMVI 241 Query: 365 AIFYFAI 371 Y I Sbjct: 242 TGVYLQI 248 >gi|315927603|gb|EFV06934.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 194 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 81/194 (41%), Positives = 117/194 (60%) Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A Q A+QL+QFGA IF +DLM I RE+ L+ A++IAGRS S+ A+IG MKI + Sbjct: 1 MVLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITD 60 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EI A+ TMG ++ PR+ AL++++PL+ +++ +IIG +V DI FA F Sbjct: 61 EIAAMNTMGFRSFEFIVIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLR 120 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 RF + +IF GL KAP IG++A GF V + S+G T VV +I VI Sbjct: 121 RFREAVDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIA 180 Query: 360 IDSLFAIFYFAIGI 373 D+LF++ + GI Sbjct: 181 FDALFSVILTSTGI 194 >gi|327402880|ref|YP_004343718.1| hypothetical protein Fluta_0879 [Fluviicola taffensis DSM 16823] gi|327318388|gb|AEA42880.1| protein of unknown function DUF140 [Fluviicola taffensis DSM 16823] Length = 246 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 52/239 (21%), Positives = 106/239 (44%), Gaps = 1/239 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G + K++ F +M +G+ +P+V L+S GAVIA Q A + Sbjct: 7 IGKYFMMMYIVFSKPEKWRIFRRRFFEEMEIIGIKSIPIVALMSAFMGAVIALQTASNMD 66 Query: 192 QFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 + + + E + ++++AG+ GS I +E+G+M++ E+IDA+ MG++ Sbjct: 67 NPLLPAYTVGFITRSSTILEFSPTIISLILAGKVGSNIASEVGTMRVTEQIDALEIMGVN 126 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 + L+ P++ + +I P+L I + ++IG + + + ++I Sbjct: 127 SLSYLVLPKVTSAMIFFPILIIFSIGLSLIGGWLSLQLSGLSSTEEYVYGIRFFFKGSDI 186 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 L K A I +A +G+ + +GK T VV + ++I + + Sbjct: 187 IYALGKTVVFAFLITSIASFKGYYTKGGALDVGKSSTEAVVSASVAILISNFFLTQMFL 245 >gi|42524770|ref|NP_970150.1| ABC transporter, permease protein [Bdellovibrio bacteriovorus HD100] gi|39576980|emb|CAE78209.1| ABC transporter, permease protein [Bdellovibrio bacteriovorus HD100] Length = 262 Score = 193 bits (492), Expect = 3e-47, Method: Composition-based stats. Identities = 61/251 (24%), Positives = 129/251 (51%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 F +G V + + + + + + Q+Y +G+ +P++++ + G Sbjct: 8 FTVFMMEVLFFIGGVGLLSRDVFRETIHGRIYYKLISEQIYQIGMRSLPLIVITAVSIGM 67 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V++ Q L +FG +++ L+++ LRE+G + T++M+A R G+ I +EIGSM + ++ Sbjct: 68 VMSLQFGMGLEKFGGKLYVPKLLAVTILREMGPVFTSLMLAARVGAGIASEIGSMVVTQQ 127 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDAIR +G ++ ++ PR+ A +I+LP+L +AN +G I+ ++ ++ + Sbjct: 128 IDAIRALGTSPIKKIVIPRVLACLITLPILVSIANIVGNLGGLIIGATELNLDPNFYYLK 187 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 +T+ + + +G K F A I I + G V + +G T VV S ++++ Sbjct: 188 VMTTSNIQDYLSGFAKTFFFAIFIAIPSCYFGLNVKAGTKEVGIATTKAVVVSSILIVVG 247 Query: 361 DSLFAIFYFAI 371 D + ++ + Sbjct: 248 DFFLSKLFWIV 258 >gi|295088056|emb|CBK69579.1| ABC-type transport system involved in resistance to organic solvents, permease component [Bacteroides xylanisolvens XB1A] Length = 235 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 60/235 (25%), Positives = 112/235 (47%), Gaps = 1/235 (0%) Query: 137 SNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE 196 G + + + F + ++ +GV+ + +V+LISF GAVI Q + Sbjct: 1 MLMGRTFSRPERMRMFFRQYLNELEQLGVNSIGIVLLISFFIGAVITIQIKLNIESPWMP 60 Query: 197 IFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 +++ ++ + L E + +++AG+ GS I +E+G+M++ ++IDA+ MG++ L Sbjct: 61 RWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGINSANYL 120 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 I P+I A++ +P+L + F+ IIGA W + I+ G+I Sbjct: 121 ILPKITAMVTVIPILVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQYMFVEWFIWAGII 180 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 K+ F A I V+ G+ V S ++GK T VV S +++ D + Sbjct: 181 KSLFFAFIIASVSAFFGYTVDGGSIAVGKASTDAVVSSSVLILFADLILTKLLMG 235 >gi|330996070|ref|ZP_08319964.1| hypothetical protein HMPREF9442_01039 [Paraprevotella xylaniphila YIT 11841] gi|329574067|gb|EGG55645.1| hypothetical protein HMPREF9442_01039 [Paraprevotella xylaniphila YIT 11841] Length = 248 Score = 193 bits (491), Expect = 4e-47, Method: Composition-based stats. Identities = 62/241 (25%), Positives = 104/241 (43%), Gaps = 1/241 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 G + G + + + F I++M +GV + +V+LISF GAVI Q Sbjct: 7 LATFGRYLMLMGRTFSRPERMRMFFKQYIKEMSQLGVDSIGIVLLISFFIGAVICIQIKL 66 Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + F + L E + +++AG+ GS I +EIG+M++ ++IDA+ M Sbjct: 67 NIQSPWMPKFVTGYTTREIMLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALEIM 126 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ LI P++ ++ +P L + FS +GA I Sbjct: 127 GVNSANYLILPKVLGMMTMMPFLVCFSIFSGFVGAYATSIIGQVITMDDLTLGLQHDFNE 186 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ G IK+ F A I V+ G+ V S +GK T VV S +++ D L Sbjct: 187 WYVWMGFIKSIFFAFVITSVSAFYGYTVEGGSVEVGKASTDSVVSSSVLILFSDVLLTQL 246 Query: 368 Y 368 Sbjct: 247 L 247 >gi|297191127|ref|ZP_06908525.1| ABC transporter integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] gi|197721749|gb|EDY65657.1| ABC transporter integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] Length = 272 Score = 193 bits (491), Expect = 4e-47, Method: Composition-based stats. Identities = 57/251 (22%), Positives = 105/251 (41%), Gaps = 9/251 (3%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVILIS 175 + + Q G ++ TG ++K L L+ ++ + V V V+ +S Sbjct: 12 LEELGRQLVFYGRSLAWTGRTLR---RYKKETLRLLAEVSFGRGALAVVGGTVGVIAFLS 68 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 F TG + QG L+Q G F L + REI L+ + ++ G+ A++G+M Sbjct: 69 FFTGTEVGLQGYAALNQLGTSNFVAFLSAYFNTREIAPLVAGLALSATVGAGFTAQLGAM 128 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 +I+EE DA+ MG+ + L++ R+ A +++ L ++ S+ A + YY Sbjct: 129 RISEETDALEVMGVPSLPFLVTTRMIAGFVAVIPLYVVGLLSSYFAARTITTGYYGQSAG 188 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + F ++ K A I +V G+ +G V V SI Sbjct: 189 TYDHYFQQYLPPVDVLWSFGKVIVFAVVIILVHCYYGYYASGGPAGVGVAVGRAVRTSIV 248 Query: 356 IVIIIDSLFAI 366 + I+D ++ Sbjct: 249 AINILDFFLSL 259 >gi|329942978|ref|ZP_08291752.1| hypothetical protein G5Q_0652 [Chlamydophila psittaci Cal10] gi|313848135|emb|CBY17136.1| putative permease component of ABC transporter [Chlamydophila psittaci RD1] gi|325506979|gb|ADZ18617.1| putative permease component of ABC transporter [Chlamydophila psittaci 6BC] gi|328814525|gb|EGF84515.1| hypothetical protein G5Q_0652 [Chlamydophila psittaci Cal10] gi|328914810|gb|AEB55643.1| ABC transporter, permease protein, putative [Chlamydophila psittaci 6BC] Length = 261 Score = 193 bits (491), Expect = 4e-47, Method: Composition-based stats. Identities = 68/253 (26%), Positives = 116/253 (45%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + C LG + T S K S+ Q Y +GV+ +PVV+L VTG Sbjct: 8 RIFQILCVFPLELGRWMGFTCAVIKSFSWKKSLFRSISIQGYDIGVASLPVVMLTGAVTG 67 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A Q +QL G + L EIG +LTA+ ++GR G AI A +G+M++ E Sbjct: 68 IVLALQSYYQLGIHGLSCAIGFFVVKSILVEIGPVLTALALSGRVGGAISAFLGTMRMTE 127 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++ A+ T+G++ + PRI A I+++P L I A +S I ++ + + V+ Sbjct: 128 QVSAMETLGVNPLEYFALPRIIAGIMAMPALVIAAVWSGIFCGYLLCRYAFQLSAQVYLH 187 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 L++I ++K+ I +A +G + K T VV S ++ Sbjct: 188 MVSGNVFLSDIVMVIVKSLVFGFIITSLACYQGLGKHCRITDVAKVTTAGVVTSYISILF 247 Query: 360 IDSLFAIFYFAIG 372 + + F+ +G Sbjct: 248 ANCVITAFFHVLG 260 >gi|254294304|ref|YP_003060327.1| hypothetical protein Hbal_1946 [Hirschia baltica ATCC 49814] gi|254042835|gb|ACT59630.1| protein of unknown function DUF140 [Hirschia baltica ATCC 49814] Length = 264 Score = 193 bits (491), Expect = 4e-47, Method: Composition-based stats. Identities = 67/268 (25%), Positives = 125/268 (46%), Gaps = 7/268 (2%) Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 + N IG+ ++ + +G + T + +L ++RQ +G Sbjct: 4 ALFNPFAAIGRAVLGTAAE-------IGRLAIFTARTVWACITPTIYLREVVRQCIQIGF 56 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 +PVV L + GA +A S+F AE F +++ + RE+G +M+AGR G Sbjct: 57 FSLPVVGLTAVFIGAALALNIYMGGSRFNAEQFVPNIVVLGITRELGPAFAGLMLAGRVG 116 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 + I AEIG+M++ E+IDA+ T+ R L +PR+ A I+LP L ++A+ ++G +V Sbjct: 117 AGIAAEIGAMRVTEQIDALHTLSAKPERYLFAPRVIAATITLPALVLIADIIGVMGGWLV 176 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 D ++ T+ ++ +GLIKA I I+ +G + +G+ Sbjct: 177 SVGALDFNSTIYLRNTLDFMTINDVLSGLIKAGVFGAIIAIMGCYQGTNSKGGAGGVGRA 236 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAIGI 373 T VV +++ + + + +G+ Sbjct: 237 ATLAVVSGAVLILASNYILTSIFVQVGL 264 >gi|123966718|ref|YP_001011799.1| putative transporter, membrane component [Prochlorococcus marinus str. MIT 9515] gi|123201084|gb|ABM72692.1| possible transporter, membrane component [Prochlorococcus marinus str. MIT 9515] Length = 251 Score = 193 bits (490), Expect = 5e-47, Method: Composition-based stats. Identities = 58/238 (24%), Positives = 113/238 (47%), Gaps = 3/238 (1%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + G+ +K K L Q+ G + +V++ G V Q A QL+ G Sbjct: 14 LIIGGQAINYIFKGKISKNDLFEQLMESGPGSLLIVLITGVAAGTVFNIQVASQLTSMGV 73 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 L+++ RE+ LLTA ++ G+ +A A++G+MK+ E+I+AI + + ++ L Sbjct: 74 SSEIGGLLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTEQIEAITMLRTEPIQYL 133 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS---TATLANIFT 312 + PR+ ++II P+ +L A+ I +Y++P +VF++ S + + +++ + Sbjct: 134 VVPRLLSMIIMSPIQCLLFLSVALWSGQIWSTIFYNVPPSVFWTSVRSGNVSLSSSDLSS 193 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +IK+ I I+A G +G T VV ++ V ++D + F Sbjct: 194 MIIKSVVFGLLISIIACGYGLTTKGGPKEVGTSTTGAVVMTLVTVSLMDVVLTQILFG 251 >gi|144898324|emb|CAM75188.1| ABC transporter permease protein [Magnetospirillum gryphiswaldense MSR-1] Length = 267 Score = 193 bits (490), Expect = 5e-47, Method: Composition-based stats. Identities = 71/255 (27%), Positives = 134/255 (52%), Gaps = 2/255 (0%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 L +G+ + +++ A +LG + + S+ Q +G++ +P Sbjct: 9 LLERLGRAAARGLSEFGFAATLLGQSLYWL--VLGHWRRQPVRAASVAAQAMDIGIAALP 66 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ ++S G ++A QG + L FGAE +++ +RE L+T +++AGRSGSA+ Sbjct: 67 IITVLSTTIGLMLAIQGIYTLKTFGAESRVTLGVALSVVREFAPLITGILVAGRSGSALA 126 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A +G+M+IN+EID++ MG++ VR L++P + A+++ +PLLT+ A+ + A + I Sbjct: 127 ARLGTMRINQEIDSLTVMGINPVRFLVAPPLAAMMVLMPLLTLWADLVGLFAAGLYISIE 186 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 A + S L ++ GL K+ + IV + G +V + +G+ T Sbjct: 187 LQGTMAGYADEVLSLLKLNDLLHGLAKSAIFGVLVTIVGVVNGASVSGGAEGVGRMTTRS 246 Query: 350 VVQSISIVIIIDSLF 364 VV +IS ++I D +F Sbjct: 247 VVHAISAIVITDMIF 261 >gi|39996027|ref|NP_951978.1| ABC transporter permease [Geobacter sulfurreducens PCA] gi|39982792|gb|AAR34251.1| ABC transporter, permease protein, putative [Geobacter sulfurreducens PCA] Length = 256 Score = 193 bits (490), Expect = 5e-47, Method: Composition-based stats. Identities = 58/245 (23%), Positives = 118/245 (48%), Gaps = 1/245 (0%) Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 S + ++ G+ + Q +GV + ++ L TG V+A Sbjct: 9 TVKSFLAEFQAFCVLSLRAVVRIFRRPGYYREFVIQFDKMGVGSLFIICLTGLFTGMVMA 68 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q QL F A + ++++ ++E+G +L+++M+AGR GS+I AE+G+M + E++DA Sbjct: 69 LQALIQLKPFAATSYVGGMVAVTMVKELGPVLSSLMVAGRVGSSITAELGTMVVTEQVDA 128 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R G D V L++ R+ AL++++P+L ++ + A++G I+ YDI +++ Sbjct: 129 MRVEGTDIVSRLVTSRLKALMLAMPMLALVTDAVALLGGYIIAAG-YDINLLMYWKSLPQ 187 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 ++ G++K I ++ G + + +G VV S +V++ D Sbjct: 188 FMVFQDLIEGVMKPFVFGTLIALIGCYVGLSTSGGAEGVGTSAKRAVVLSSVMVLVADFF 247 Query: 364 FAIFY 368 + Sbjct: 248 MTKIF 252 >gi|162451968|ref|YP_001614335.1| putative ABC transport system permease protein [Sorangium cellulosum 'So ce 56'] gi|161162550|emb|CAN93855.1| putative ABC transport system permease protein [Sorangium cellulosum 'So ce 56'] Length = 296 Score = 193 bits (490), Expect = 5e-47, Method: Composition-based stats. Identities = 70/268 (26%), Positives = 129/268 (48%), Gaps = 1/268 (0%) Query: 99 QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158 + + + + A +G + G+ A + +R Sbjct: 25 PPAPPVKRPRAPIAQEPSGVHQLGGSFLQIAATVGGMAVLAGKIAARVATLRVDGAEFMR 84 Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 +Y +GV +P+V++ + TGA++ Q A + +FGA LREI LLTA+ Sbjct: 85 NLYRMGVKSMPIVVVTALFTGAIMVIQAAPLVERFGAHGLLGWGAGFGTLREIAPLLTAL 144 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 MI GR G+ AE+G+M + E+IDA+R + +D V LI+PR A++++L L I A+ A Sbjct: 145 MINGRVGANNTAELGTMVVTEQIDALRVLAIDPVSFLIAPRFLAMVLTLLLSVIFADALA 204 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHS-TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 ++GA++ + AVF++ S + ++ +GL+K+ + + + + G V Sbjct: 205 LLGAALTGDLLLGVAPAVFYNGLTSGLLDIGDVMSGLVKSVVFGVVLALSSCQYGLGVTG 264 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + +G+ V VV S + + I+D + Sbjct: 265 GAPGVGRAVNATVVASAAGIFILDYFVS 292 >gi|307634769|gb|ADI83773.2| transporter membrane protein of unknown function DUF140 [Geobacter sulfurreducens KN400] Length = 256 Score = 192 bits (489), Expect = 6e-47, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 117/245 (47%), Gaps = 1/245 (0%) Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 S + ++ + + Q +GV + ++ L TG V+A Sbjct: 9 TVKSFLAEFQAFCVLSLRAVVRIFRRPSYYREFVIQFDKMGVGSLFIICLTGLFTGMVMA 68 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q QL F A + ++++ ++E+G +L+++M+AGR GS+I AE+G+M + E++DA Sbjct: 69 LQALIQLKPFAATSYVGGMVAVTMVKELGPVLSSLMVAGRVGSSITAELGTMVVTEQVDA 128 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R G D V L++ R+ AL++++P+L ++ + A++G I+ YDI +++ Sbjct: 129 MRVEGTDIVSRLVTSRLKALMLAMPMLALVTDAVALLGGYIIAAG-YDINLLMYWKSLPQ 187 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 ++ G++K I ++ G + + +G VV S +V++ D Sbjct: 188 FMVFQDLIEGVMKPFVFGTLIALIGCYVGLSTSGGAEGVGTSAKRAVVLSSVMVLVADFF 247 Query: 364 FAIFY 368 + Sbjct: 248 MTKIF 252 >gi|312888399|ref|ZP_07747975.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM 18603] gi|311299233|gb|EFQ76326.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM 18603] Length = 243 Score = 192 bits (489), Expect = 6e-47, Method: Composition-based stats. Identities = 61/243 (25%), Positives = 116/243 (47%), Gaps = 1/243 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + LG I KF + ++R+M +G+ + ++ +IS GAV Q A Sbjct: 1 MLYHLGRYILLMKLSFKRPEKFSVYWAEVMREMVSIGLGSLGIISIISVFIGAVATIQTA 60 Query: 188 FQL-SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 FQL S F + + + E ++A+++AGR GS+I ++IG+M++ E+IDA+ Sbjct: 61 FQLVSDFIPKTIVGTITRDSTILEFSPTISALVLAGRVGSSIASQIGTMRVTEQIDALEI 120 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG++ LISP+I + ++ +PLLT+++ ++G I ++ A + + Sbjct: 121 MGVNAPGYLISPKIISGVLMIPLLTVISISLGLLGGYIACAASSEVSTADYITGLTDGFK 180 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + ++KA F I + +GF + +G+ T VV S ++ D + + Sbjct: 181 TIILQVSMVKATFFGFIITSICAYQGFYTSGGALEVGQSATRGVVFSCIFILFADLVISR 240 Query: 367 FYF 369 Sbjct: 241 LML 243 >gi|84494808|ref|ZP_00993927.1| putative ABC transporter integral membrane protein [Janibacter sp. HTCC2649] gi|84384301|gb|EAQ00181.1| putative ABC transporter integral membrane protein [Janibacter sp. HTCC2649] Length = 276 Score = 192 bits (488), Expect = 8e-47, Method: Composition-based stats. Identities = 55/239 (23%), Positives = 103/239 (43%), Gaps = 9/239 (3%) Query: 137 SNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---------VPVVILISFVTGAVIAQQGA 187 S + + ++R + V + V V+ ++F TG+ + QG Sbjct: 25 FYVRSIAWSPRTIRRYKKEILRLLAEVSLGSGALSVIAGTVGVLTFMAFFTGSQVGLQGY 84 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L+Q G F+ L + L REI L+ + +A G A++G+M+I+EE+DA+ M Sbjct: 85 SSLNQLGTGAFAGFLAAYLNTREIAPLVAGLSLAATVGCGFTAQLGAMRISEEVDALEVM 144 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ + L++ R+ A I++ L ++ S+ ++ Y+ + FH Sbjct: 145 GIPSLPFLVTTRMIAGFIAVIPLYVIGLLSSYAATRFIVTDYFGQSKGTYDHYFHLFLPP 204 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 +IF +K A I ++ G+ +G V V SI V ++D F++ Sbjct: 205 IDIFYSFLKVLVFAVIIILIHCYYGYTASGGPAGVGVAVGKAVRTSIVAVNLVDFFFSL 263 >gi|29832443|ref|NP_827077.1| ABC transporter integral membrane protein [Streptomyces avermitilis MA-4680] gi|29609562|dbj|BAC73612.1| putative ABC transporter permease protein [Streptomyces avermitilis MA-4680] Length = 267 Score = 192 bits (488), Expect = 8e-47, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 111/262 (42%), Gaps = 9/262 (3%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPV 170 ++ + + SQ G ++ TG ++K +L L+ ++ + V V V Sbjct: 2 ALLNRLEELGSQLSFYGRSLAWTGRTVR---RYKKEILRLLAEVSFGRGALAVVGGTVGV 58 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 + +SF TG + QG L+Q G F L + REI L+ + ++ G+ A Sbjct: 59 IAFLSFFTGTEVGLQGYAALNQLGTSNFVAFLSAYFNTREIAPLVAGLALSATVGAGFTA 118 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 ++G+M+I+EE DA+ MG+ + L++ R+ A +++ L ++ S+ A + YY Sbjct: 119 QLGAMRISEETDALEVMGVPSLPFLVTTRMIAGFVAVIPLYVVGLLSSYFAARTITTGYY 178 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 + F ++ K A I +V G+ +G V V Sbjct: 179 GQSAGTYDHYFQQYLPPVDVLWSFGKVLVFAVLIILVHCFYGYYASGGPAGVGVAVGRAV 238 Query: 351 VQSISIVIIIDSLFAIFYFAIG 372 SI + ++D ++ + G Sbjct: 239 RTSIVAINVLDFFLSLAIWGAG 260 >gi|298372676|ref|ZP_06982666.1| membrane protein [Bacteroidetes oral taxon 274 str. F0058] gi|298275580|gb|EFI17131.1| membrane protein [Bacteroidetes oral taxon 274 str. F0058] Length = 248 Score = 192 bits (488), Expect = 8e-47, Method: Composition-based stats. Identities = 54/246 (21%), Positives = 104/246 (42%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + + ++ ++ F L ++ +G++ V +++LIS G ++ Sbjct: 2 VKKLLTTTGRYVQLMRQTFSAPDNWRVFWRQLPSEIEKLGINTVGIIVLISIFMGVIMTM 61 Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + + ++ L E + ++++AG+ GS I +EIG+M+I E+IDA Sbjct: 62 QTVMNTENPMLPRYSTGLVLRDTLLLEFSSTIMSLLLAGKVGSNIASEIGTMRITEQIDA 121 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I L+I +P+L L+ F + G V I + F Sbjct: 122 LDIMGINSANYLILPKIIGLMICMPMLVTLSVFLGLAGGCGVAVFTDMITLSDFIYGIQY 181 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +IK+ F I V+ G+ + +G+ T VV S + + + L Sbjct: 182 AFVPYYFTYSIIKSFFFGFIISSVSAFYGYYAYGGALDVGRASTNAVVNSSILTLAANVL 241 Query: 364 FAIFYF 369 Sbjct: 242 LTQLLL 247 >gi|296139955|ref|YP_003647198.1| hypothetical protein Tpau_2250 [Tsukamurella paurometabola DSM 20162] gi|296028089|gb|ADG78859.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM 20162] Length = 267 Score = 192 bits (488), Expect = 9e-47, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 113/256 (44%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + K S G++ + ++++ I Q +++ + L++ Sbjct: 6 RSVAKAAQGGTSALTQAGMIFQLFADIVRNTFRRPFQYREFIEQSWFIASVTILPTALVA 65 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 GA+++ Q + Q GAE F+ + +++ ++TA+++AG +GSA+ A++G+ Sbjct: 66 VPFGAIVSLQTGSLIGQLGAESFTGAASVLAVVQQGAPVVTALLVAGAAGSAVCADLGAR 125 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 + EEI A+ +G++ V+ L+ PR+ +++ L L + ++G Sbjct: 126 TVREEIAAMEVLGINPVQRLVVPRVLGMMLVSMFLNGLVSVVGVVGGYFFNVVLQHGTPG 185 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + + F + A L ++ G KA G+VA +G G +G V VV + Sbjct: 186 AYLASFSALAQLPDLLVGEFKALVFGLIAGVVAAYKGLHPGGGPKGVGDAVNQSVVITFL 245 Query: 356 IVIIIDSLFAIFYFAI 371 ++ + + Y + Sbjct: 246 LLFFANIILTAVYLQV 261 >gi|255037710|ref|YP_003088331.1| hypothetical protein Dfer_3962 [Dyadobacter fermentans DSM 18053] gi|254950466|gb|ACT95166.1| protein of unknown function DUF140 [Dyadobacter fermentans DSM 18053] Length = 242 Score = 192 bits (488), Expect = 9e-47, Method: Composition-based stats. Identities = 59/242 (24%), Positives = 109/242 (45%), Gaps = 1/242 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 ++G G K + L+ + +GVS + +V ++S GAV Q A+ Sbjct: 1 MSVIGKYFIFLGTLFGKGEKLSVYWRRLMEECVGIGVSSIFIVAIVSTFIGAVSCIQTAY 60 Query: 189 QLSQFGAEIFSIDLMSILQ-LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L I ++ L+ + E+ +T +++AG+ GS I +E+G+M+I E+IDA+ M Sbjct: 61 NLVSPIIPISTVALIVRDMEILELAPTITCIVLAGKVGSNIASELGTMRITEQIDALEVM 120 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ L+ P++ A +++ P+L I + F I+G + I + + Sbjct: 121 GINSSSYLVLPKVVAAMLTFPMLVIFSAFLGILGGYLAGTLTGVITERDYLYGIRDSFVP 180 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 NIF +K I ++ +GF + +GK T V S +++ D L A Sbjct: 181 YNIFFMCVKPFVFGFLIASISSFKGFFTSGGALEVGKASTQAVTNSCISILVADYLLAQL 240 Query: 368 YF 369 Sbjct: 241 LL 242 >gi|89898182|ref|YP_515292.1| ABC transporter [Chlamydophila felis Fe/C-56] gi|89331554|dbj|BAE81147.1| ABC transporter [Chlamydophila felis Fe/C-56] Length = 261 Score = 192 bits (488), Expect = 9e-47, Method: Composition-based stats. Identities = 68/253 (26%), Positives = 117/253 (46%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + + LG + T S K L S Q Y +GV+ +PVV+L VTG Sbjct: 8 RIFRILYTFPLELGRWMGFTYAVIKSFSWKKSLLRSTSMQGYDIGVASLPVVMLTGAVTG 67 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A Q +QL G + L EIG +LTA+ ++GR G AI A +G+M++ E Sbjct: 68 IVLALQSYYQLGIHGLSCAIGFFVVKSILVEIGPVLTALALSGRVGGAISAFLGTMRMTE 127 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++ A+ T+G++ + PRI A II++P L I A ++ I ++ + +P V+ Sbjct: 128 QVSAMETLGVNPLEYFALPRIIAGIIAMPALVIAAVWAGIFCGYLLCRCAFQLPAHVYLH 187 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 +++I ++K+ I +A +G + K T VV S ++ Sbjct: 188 MVSGNVLISDIVMVIVKSLVFGFIITSLACYQGLGKHCRIMDVAKVTTAGVVTSYISILF 247 Query: 360 IDSLFAIFYFAIG 372 + + F+ +G Sbjct: 248 ANCVITTFFHLLG 260 >gi|317125893|ref|YP_004100005.1| hypothetical protein Intca_2777 [Intrasporangium calvum DSM 43043] gi|315589981|gb|ADU49278.1| protein of unknown function DUF140 [Intrasporangium calvum DSM 43043] Length = 282 Score = 191 bits (487), Expect = 1e-46, Method: Composition-based stats. Identities = 53/270 (19%), Positives = 109/270 (40%), Gaps = 9/270 (3%) Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162 + + + + + +Q ++ +G ++K ++ L+ ++ Sbjct: 3 PVQAVSRPLARLAGRPGRGLESLGAQMRFYVRSLAWSGRTVR---RYKKEVVRLLAEVSL 59 Query: 163 ------VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 V V V+ ++F TG + QG L Q G F+ + REI L+ Sbjct: 60 GTGALSVIGGTVGVIAFMAFFTGTEVGLQGYSALEQLGTGAFTGFFSAYFNTREIAPLVA 119 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 + +A G A++G+M+I+EE+DA+ MG+ + L++ R+ A +++ L ++ Sbjct: 120 GLALAATVGCGFTAQLGAMRISEEVDALEVMGVPSLPYLVTTRMIAGFVAVVPLYVIGLL 179 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 S+ + Y+ + FH +IF K A I ++ G+ Sbjct: 180 SSYAATRFIATTYFGQSEGTYDHYFHLFLPPGDIFWSFGKVMVFAVVIILIHCYYGYTAS 239 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 +G V T V SI + ++D ++ Sbjct: 240 GGPAGVGVAVGTAVRTSIVAINVVDFFLSL 269 >gi|285016849|ref|YP_003374560.1| ABC transporter permease [Xanthomonas albilineans GPE PC73] gi|283472067|emb|CBA14574.1| putative abc transporter permease abc transporter, permease protein [Xanthomonas albilineans] Length = 249 Score = 191 bits (487), Expect = 1e-46, Method: Composition-based stats. Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + LG S + L LIR++Y VG +P++ + G V+ Sbjct: 3 MAASIRALGRAGLFFLTVLRGSLPSRDLLAELIREIYKVGARSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ +GA L+ + RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ Sbjct: 63 QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D V ++PR WA ++++PLLT + AI + + F+S S+ Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGIFCSLAISASYFEAIGALGLDRGTFWSALSSS 182 Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++K+ +VA GF T VV + +V++ + + Sbjct: 183 VDFWADFGVAMLKSAVFGGTAALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242 Query: 364 FAIFYF 369 + F Sbjct: 243 MSALLF 248 >gi|226349637|ref|YP_002776751.1| putative YrbE family protein [Rhodococcus opacus B4] gi|226245552|dbj|BAH55899.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 266 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 56/253 (22%), Positives = 104/253 (41%) Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 G++ K +G + + E +K L ++Q +++ + +L+ Sbjct: 11 GERSAKARAALRVAPRAVGAFYATSLETYRCMFKRPFHLREFLQQAWFIASVSIMPALLM 70 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 + + Q L++ GA + + +REIG ++T +++AG +AI A++GS Sbjct: 71 AIPFCMMFVYQINILLAEIGAVDLAGAGAGVAIVREIGPIVTVLVVAGAGSTAICADLGS 130 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 I EEIDA++ +G+D + L PR+ A L L + ++G I Sbjct: 131 RTIREEIDAMKVLGIDPIHRLCVPRVLASTFIAIFLNGLVSAVGLVGGYIATVYMQGASP 190 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 + + L + F IKA G+VA G V +G V VV S Sbjct: 191 GQYVTAISIITGLGDFFVAEIKAAVFGMLAGLVACHLGLNVRGGPKGVGDAVNQTVVFSF 250 Query: 355 SIVIIIDSLFAIF 367 ++ + +S+ Sbjct: 251 LLLFLANSIITTL 263 >gi|258546129|ref|ZP_05706363.1| membrane protein [Cardiobacterium hominis ATCC 15826] gi|258518554|gb|EEV87413.1| membrane protein [Cardiobacterium hominis ATCC 15826] Length = 263 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 66/266 (24%), Positives = 125/266 (46%), Gaps = 9/266 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + +G + + ++ + L +R Y GV Sbjct: 4 VSDFLAAVGATTLACLAALGDFCLFALALLRHVAILLRKP-------LLTLRATYAAGVL 56 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +P++++ G V++ Q + +FGAE ++++ LRE+G +++A++ AGR+GS Sbjct: 57 SLPIILVAGLFVGMVLSFQAYTTMVRFGAEQALGTMVALSLLRELGPVVSALLFAGRAGS 116 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 AI AEIG MK E++ A+ M ++ V + PR +LPLLTIL AIIGA +V Sbjct: 117 AITAEIGLMKTTEQLVAMEMMAIEPVAQVGVPRFLGAWFALPLLTILFVAVAIIGAHLVG 176 Query: 287 WKYYDIPFAVFFSRFHSTATL-ANIFTGL-IKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 Y + +F+S ++ +++ G+ +K+ +A+ +GF+ ++ + + Sbjct: 177 VVYLGLDDGIFWSGMQNSVDFGSDVVRGMLLKSLVFGWVCAAIAVFQGFSSLPTASGMSR 236 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370 TT VV S V+ ++ + F Sbjct: 237 ATTTTVVMSSLAVLGLNFVLTAMLFG 262 >gi|198276177|ref|ZP_03208708.1| hypothetical protein BACPLE_02366 [Bacteroides plebeius DSM 17135] gi|198270989|gb|EDY95259.1| hypothetical protein BACPLE_02366 [Bacteroides plebeius DSM 17135] Length = 247 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 63/240 (26%), Positives = 111/240 (46%), Gaps = 1/240 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + G + +F+ + + +M +G++ + +V+LISF GAVI Q + Sbjct: 8 LGKYLMLMGRVFSRPERFRMYFKQYLNEMVQLGINSIGIVLLISFFIGAVICIQIKLNIE 67 Query: 192 QFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 F + + + L E + +++AG+ GS I +EIG+M++ ++IDA+ MG++ Sbjct: 68 SPWMPRFVVGYTTREILLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALEIMGVN 127 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 LI P+I L+ +P L I + F+ +IGA W + I Sbjct: 128 SASYLILPKILGLMTMIPFLVIFSIFAGVIGAFCTAWFAGIMNATDLEYGLQYCFVEWYI 187 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + IK+ F A I V+ G+ V S ++GK T VV S +++ D + Sbjct: 188 WCSFIKSLFFAFIIASVSAYFGYTVEGGSIAVGKASTDSVVSSSVLILFSDLILTQLLMG 247 >gi|62185216|ref|YP_220001.1| putative permease component of ABC transporter [Chlamydophila abortus S26/3] gi|62148283|emb|CAH64049.1| putative permease component of ABC transporter [Chlamydophila abortus S26/3] Length = 261 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 70/253 (27%), Positives = 117/253 (46%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + C LG + T S K S+ Q Y +GV+ +PVVIL VTG Sbjct: 8 RIFQILCVFPLELGRWMGFTCAVIKSLSWKKSLFRSVNIQGYDIGVASLPVVILTGAVTG 67 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A Q +QL G + L EIG +LTA+ ++GR G AI A +G+M++ E Sbjct: 68 IVLALQSCYQLGIHGLSCAIGFFVVKSILVEIGPVLTALALSGRVGGAISAFLGTMRMTE 127 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++ A+ T+G++ + PRI A I++P L I A +S I G ++ + +P V+ Sbjct: 128 QVSAMETLGVNPLAYFALPRIIAGTIAMPALVIAAVWSGIFGGYLLCRYAFQLPAQVYLH 187 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 +++I ++K+ I +A +G + K T VV S ++ Sbjct: 188 MVSGNVFISDIVMVIVKSLVFGFIITSLACYQGLGKHCRITDVAKVTTAGVVTSYISILF 247 Query: 360 IDSLFAIFYFAIG 372 + + F+ +G Sbjct: 248 ANCVITAFFHVLG 260 >gi|226229261|ref|YP_002763367.1| putative transporter [Gemmatimonas aurantiaca T-27] gi|226092452|dbj|BAH40897.1| putative transporter [Gemmatimonas aurantiaca T-27] Length = 275 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 55/267 (20%), Positives = 114/267 (42%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 L + +I + +G + ++ +L + Sbjct: 4 PREPAGLPERLHDRITALGGVTRRLIEPIGTGARFVRDVARATKDTAQWLPEFSTHARVL 63 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 GV +P+ I I+ TG V+A ++ + F L+ E+ +LT + +AGR Sbjct: 64 GVDSLPIGIFIALFTGIVLALLASYSVGDLVPPYFVGTLVQKTITLELAPVLTGLALAGR 123 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 G+ I AE+G+M++ E+IDA+ T+ D + L+ PR+ A + P++ +A ++ Sbjct: 124 VGANIAAELGTMRVTEQIDALETLTFDPMSHLVVPRVLASALMFPIVVGMAMLVGLLSGW 183 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 + DI F ++ GL+K+ A+ ++ + G + +G Sbjct: 184 VASIVLLDIATPQFLKGVRLFFQPFDVQYGLVKSASFGAAVALIGCRAGLNTLGGAQGVG 243 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370 + T VV S +++++D+ +AI + + Sbjct: 244 RSATRAVVISAVMILVLDAFWAIVWLS 270 >gi|226364103|ref|YP_002781885.1| YrbE family protein [Rhodococcus opacus B4] gi|226242592|dbj|BAH52940.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 264 Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats. Identities = 51/236 (21%), Positives = 99/236 (41%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G + + E +K ++Q +++ + +L++ + Q L+ Sbjct: 26 VGAFYATSMETVRCMFKRPFHAREFVQQAWFIAGVSIMPALLMAIPFCMMFVYQINILLA 85 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + GA S + +REIG ++T +++AG +AI A++GS I EEIDA++ +G+D Sbjct: 86 EIGAVDLSGAGAGVAIIREIGPVVTVLVVAGAGSTAICADLGSRTIREEIDAMKVLGIDP 145 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 ++ L PR+ A + L L + ++G I + + L + Sbjct: 146 IQRLCVPRVLASTLIGMFLNGLVSAVGLVGGYIATVYMQGASPGQYVTAISILTGLPDFL 205 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 +KA G+VA G +G V VV S ++ + +S+ Sbjct: 206 VSEVKAAVFGMLAGLVACHLGLNAKGGPKGVGDAVNQTVVFSFLLLFLANSVITTL 261 >gi|218262319|ref|ZP_03476833.1| hypothetical protein PRABACTJOHN_02507 [Parabacteroides johnsonii DSM 18315] gi|218223470|gb|EEC96120.1| hypothetical protein PRABACTJOHN_02507 [Parabacteroides johnsonii DSM 18315] Length = 248 Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats. Identities = 63/244 (25%), Positives = 117/244 (47%), Gaps = 2/244 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 H +G + + + ++ F LI+++Y +GV + +VI+IS G VIA Q + Sbjct: 4 ALHQVGEYVMLMAKCISVPNRWSMFFKQLIKEIYKLGVDSLWIVIIISIFIGTVIAIQIS 63 Query: 188 FQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 +S F+I + + L E + ++++AG+ GS I +EIG+M++ E+IDA+ Sbjct: 64 LNISSPLIPKFTIGYTTREIILLEFSSSIMSLILAGKVGSNIASEIGTMRVTEQIDAMEI 123 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY-DIPFAVFFSRFHSTA 305 MG++ LI P++ ++ +P+L I + F+ I+G + A F Sbjct: 124 MGVNSANFLILPKMVGMMTFIPVLVIFSMFTGILGGIAASHSTGTGMTPASFEYGLQFYF 183 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 I+ +IK+ A I +A G+ V + +GK T VV S ++++ D + Sbjct: 184 NEFYIWYSIIKSVVYAFIISSIAAYFGYNVKGGALEVGKASTNAVVMSSIMILLADVILT 243 Query: 366 IFYF 369 Sbjct: 244 NLML 247 >gi|269128029|ref|YP_003301399.1| hypothetical protein Tcur_3830 [Thermomonospora curvata DSM 43183] gi|268312987|gb|ACY99361.1| protein of unknown function DUF140 [Thermomonospora curvata DSM 43183] Length = 267 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 105/252 (41%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + + + GL+ E ++ + + I Q +++ V+LI+ G Sbjct: 11 RVLRRAGKALDETGLLFVIFLEGLRRTWDVRTWWGEFIEQCWFIARVTSMPVLLIAIPLG 70 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 A I+ Q Q GA+ + L+ + ++ L +A++I+G GSAI +++G+ I + Sbjct: 71 ATISLQAGDIARQLGAQSGTGALVVANMITQVAPLASALLISGAGGSAITSDMGARNIRD 130 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+ A+ MG++ V L++PR+WA LL + S G + +F Sbjct: 131 ELAAMEVMGINPVHRLVTPRLWAASTVAVLLCSVVILSGTAGGFYFNVIQQGVSPGAYFD 190 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 S +++ L KA VA G + +G+ V VV + +V Sbjct: 191 GATSLLQFSDLVVTLFKAWIFGFIAAAVACYAGMNCDLGPVGVGRAVNKAVVVTSILVFS 250 Query: 360 IDSLFAIFYFAI 371 + + + Y + Sbjct: 251 ANYVITMLYQVL 262 >gi|254423231|ref|ZP_05036949.1| conserved domain protein [Synechococcus sp. PCC 7335] gi|196190720|gb|EDX85684.1| conserved domain protein [Synechococcus sp. PCC 7335] Length = 291 Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats. Identities = 55/234 (23%), Positives = 106/234 (45%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 + + G+ + + ++ + G V VI + G + Q A ++S+F Sbjct: 51 MALLLAGQVIHRLLRGRFGQRQIMDHLMSAGPRCVASVIATNVCAGLIFGIQTAREMSRF 110 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 GA + E+ +LTA ++A + GSA AEI +MK+ ++IDA++ + D + Sbjct: 111 GAVSSLGSAFAAGYCSELAPILTAGVLACQVGSAFAAEIAAMKLTQQIDALKMLRTDPID 170 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 L+ PR+ A + LP+LT+LA ++ + YY +P F +++++ Sbjct: 171 YLVMPRVIACAVMLPMLTVLALVCGVMSGGFLTTYYYHLPMGTFLDGVRGALSVSDVLLI 230 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + KA I I + G +H +G+ T+ V+ + + ID + A Sbjct: 231 MGKAILFGLVIAIASCSRGLTSALHGKGVGQSATSAVMMAWIALFFIDLVIAFL 284 >gi|54027083|ref|YP_121325.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54018591|dbj|BAD59961.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 264 Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats. Identities = 57/249 (22%), Positives = 114/249 (45%), Gaps = 4/249 (1%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + ++ L + + ++++ F I Q +++ + L++ GAV+ Sbjct: 14 SGFAQAGNVFALFVDVLRKMFRRPFQWREF----IEQSWFIASVSILPSALVAIPFGAVV 69 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A Q + Q GAE ++ + +++ ++TA++IAG +GSA+ A++GS I EEID Sbjct: 70 ALQTGSLIKQLGAESYTGATSVLATVQQAAPVVTALIIAGAAGSAVAADLGSRTIREEID 129 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +G+D + L+ PR+ + + LL L + I G + S F Sbjct: 130 AMEVLGVDPIARLVVPRVLGMTLVAVLLNGLVSVVGIAGGYFFNVLLQGGTPGAYLSSFS 189 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + A L +++ G IKA G++A +G +G V VV + ++ ++ Sbjct: 190 ALAQLPDLWIGEIKAAIFGLLAGVIAAYKGLHPKGGPKGVGDAVNQSVVITFLVLFFVNL 249 Query: 363 LFAIFYFAI 371 + + Y + Sbjct: 250 ILTLVYLQV 258 >gi|296532685|ref|ZP_06895378.1| ABC superfamily ATP binding cassette transporter, ABC protein [Roseomonas cervicalis ATCC 49957] gi|296266987|gb|EFH12919.1| ABC superfamily ATP binding cassette transporter, ABC protein [Roseomonas cervicalis ATCC 49957] Length = 278 Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats. Identities = 78/263 (29%), Positives = 139/263 (52%), Gaps = 3/263 (1%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 IG V + D + LG + T + + + L+R + G+ P Sbjct: 18 FVAGIGAWAVAVLRDVRAATGFLGEAVVMTLSLLPRPRRLR--VGDLLRHLDEAGLRAFP 75 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 + +L+ + G ++A Q + + Q+GAEI+ L+ I LRE+G L+ A+++AGR+GSA Sbjct: 76 LTLLLGLLIGVILAFQSSIPMRQYGAEIYIPSLVGISLLRELGPLIAAIILAGRTGSAFA 135 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AE+G+M +NEE+DA+R MG+D + +L+ PR+ A ++ +P+LT+L N S +IG + Sbjct: 136 AELGTMTVNEEVDALRIMGIDPMVMLVLPRLIAAMLVMPVLTLLMNLSGLIG-MGTVMGA 194 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 P A+ ++ TL + GL K+ + + + G + G ++G T Sbjct: 195 LGFPAALVINQLSYWLTLGTLLGGLGKSVVFGLVVAGIGCRAGLSAGRGPRAVGDAATAA 254 Query: 350 VVQSISIVIIIDSLFAIFYFAIG 372 VV I +++D LFA+ ++ +G Sbjct: 255 VVGGIVSTVVLDGLFAVLFYRLG 277 >gi|325104961|ref|YP_004274615.1| protein of unknown function DUF140 [Pedobacter saltans DSM 12145] gi|324973809|gb|ADY52793.1| protein of unknown function DUF140 [Pedobacter saltans DSM 12145] Length = 244 Score = 190 bits (482), Expect = 4e-46, Method: Composition-based stats. Identities = 62/243 (25%), Positives = 111/243 (45%), Gaps = 1/243 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 G I KF + + ++M Y+G+ + ++ +IS GAV+ Q A Sbjct: 2 FFSYFGKYILLLKAVFRKPEKFSLYWKEIAKEMVYIGIGSLALISIISVFVGAVMTLQIA 61 Query: 188 FQL-SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 FQL S F + + + E+ + A+++AG+ GS+I +EIG+M++ E+IDA+ Sbjct: 62 FQLVSDFIPKTIVGSVNRDSAILELSPTICALVLAGKIGSSISSEIGTMRVTEQIDALEI 121 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG++ LI P+I A I +P+L ++ F A++G + + + + + Sbjct: 122 MGINAPGYLILPKIIAGITMIPILVYISIFLALLGGYVGGVASGVVSSSDYIQGITTGFI 181 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + +KA I VA +GF V + +GK T VV S ++ D + Sbjct: 182 PYTMAVAGVKAFIFGFIITSVASYQGFYVNGGALEVGKAGTKTVVISCIAILSADYIITE 241 Query: 367 FYF 369 Sbjct: 242 LML 244 >gi|289641747|ref|ZP_06473905.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] gi|289508391|gb|EFD29332.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] Length = 286 Score = 189 bits (481), Expect = 5e-46, Method: Composition-based stats. Identities = 55/241 (22%), Positives = 110/241 (45%), Gaps = 2/241 (0%) Query: 133 GLVISNTGEFCASSYKFK-GFLLSLIRQMYYV-GVSGVPVVILISFVTGAVIAQQGAFQL 190 G ++ G+ S+ + G+ + QM+ + + +P+++ + QG Sbjct: 38 GEMVQLAGQVFGSAIRHPVGYWGEVRDQMFEILKLCWIPMMVSCTAFGFGAPGLQGGNLF 97 Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 FG + +RE + A+++AG G+A+ A++G+ +I EEIDA+ +G+D Sbjct: 98 LLFGIPERLGSFFIMASVREFAPWINAMVVAGVMGTAMTADLGARRIREEIDAMEVLGVD 157 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 +R LI PR+ A+ + LL ++A ++G + + FF F + AT+ ++ Sbjct: 158 PIRTLIVPRVLAITLMTGLLDLVALAFGVLGGYMASVWVLGANSSAFFENFFANATVTDV 217 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + K IG+V +G +G+ V VV S + + I + +F Sbjct: 218 WASVAKTTIFGLLIGVVCCYKGLHTQGGPIGVGRAVNQAVVISFAAIWIFNYVFTTILLG 277 Query: 371 I 371 + Sbjct: 278 L 278 >gi|54027607|ref|YP_121849.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54019115|dbj|BAD60485.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 284 Score = 189 bits (481), Expect = 5e-46, Method: Composition-based stats. Identities = 57/236 (24%), Positives = 102/236 (43%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 IS E + ++ + +RQ ++ +L++ G +++ Q Q GA Sbjct: 43 ISAVAELFIAIFRRRFPFDEFVRQCAFMANVAAAPTLLVAIPIGVIVSIQVGAVAGQVGA 102 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 F + +++ L+T++MIAG GSAI A++GS I EEIDA++ MG+D +R L Sbjct: 103 TSFIGAANGLGIVQQGAPLVTSIMIAGAVGSAICADLGSRTIREEIDAMKVMGVDPMRRL 162 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 ++PR+ A ++ LL F + I + F S A ++ L+ Sbjct: 163 VAPRLGAAMLVSVLLCGFVVFVGFLTGYIFNIFAQGGTPGSYIGTFSSFAVTRDLLVALV 222 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 K+ I+A G + V + VV S ++ ++ Y A+ Sbjct: 223 KSLIFGLLAAIIACDTGLNTRGGPGGVANSVNSAVVSSAIMLFGVNLGITQIYSAL 278 >gi|60683336|ref|YP_213480.1| hypothetical protein BF3899 [Bacteroides fragilis NCTC 9343] gi|60494770|emb|CAH09576.1| putative membrane protein [Bacteroides fragilis NCTC 9343] gi|301164825|emb|CBW24385.1| putative membrane protein [Bacteroides fragilis 638R] Length = 254 Score = 189 bits (481), Expect = 6e-46, Method: Composition-based stats. Identities = 63/250 (25%), Positives = 116/250 (46%), Gaps = 1/250 (0%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 I +G I G + + + F I+++ +GV+ + +V+LISF GAV Sbjct: 5 IRVMIKALRTVGRYIMLMGRTFSRPERMRMFFRQYIKEIEQLGVNSIGIVLLISFFIGAV 64 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 I Q + +++ ++ + L E + +++AG+ GS I +E+G+M++ ++ Sbjct: 65 ITIQIKLNIESPWMPRWTVGYVTREILLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQ 124 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ MG++ LI P+I A++ +P+L + F+ IIGA W + Sbjct: 125 IDALEIMGVNSANYLILPKITAMVTMIPILVTFSIFAGIIGAFATCWFGGIMTATDLEYG 184 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 ++ G+IK+ F A I V+ G+ V S +GK T VV S +++ Sbjct: 185 LQYMFVEWFVWCGIIKSLFFAFIIASVSSFFGYTVEGGSIEVGKASTDSVVSSSVLILFA 244 Query: 361 DSLFAIFYFA 370 D + Sbjct: 245 DLVLTKLLMG 254 >gi|189347228|ref|YP_001943757.1| hypothetical protein Clim_1737 [Chlorobium limicola DSM 245] gi|189341375|gb|ACD90778.1| protein of unknown function DUF140 [Chlorobium limicola DSM 245] Length = 264 Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats. Identities = 62/238 (26%), Positives = 114/238 (47%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + + + K K + + Q G +P+V++ + G+++A Sbjct: 17 AKDFLLTMQEFFLFSMRAFFTLPKLKRYWRDFLDQATICGTDSIPIVLVSAVSIGSLLAI 76 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 + L FGA+ SI +RE+G LL +M++ R GS AE+G+MKI+E+IDA+ Sbjct: 77 EVGNLLEDFGAKTMLGRSTSISVIRELGPLLMGLMLSARFGSRNGAELGAMKISEQIDAL 136 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R G D V L+ PR+ A ++ LT L++F+ + A+ + Y+ + +F++ + Sbjct: 137 RAFGTDPVAKLVMPRLAAALVMFIPLTALSDFAGLQSAAYLAEHYHHLDPGIFWNAVYPR 196 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + G KAP A I +V+ GF + +G+ +V S +V+I + Sbjct: 197 LGPKDFVVGFAKAPVFAIIITLVSSYNGFIAKGGTAGVGRATIKGIVVSSGLVLIANF 254 >gi|145219305|ref|YP_001130014.1| hypothetical protein Cvib_0490 [Prosthecochloris vibrioformis DSM 265] gi|145205469|gb|ABP36512.1| protein of unknown function DUF140 [Chlorobium phaeovibrioides DSM 265] Length = 264 Score = 189 bits (480), Expect = 7e-46, Method: Composition-based stats. Identities = 63/245 (25%), Positives = 118/245 (48%), Gaps = 4/245 (1%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + + + + F K + + + Q G +P+V++ + Sbjct: 14 VYRLKDFFLTMQDFF---LFGVRSFLTIP-KIRRYWRDFLDQAKICGADSIPIVLVSAIS 69 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G+++A + L FGA+ SI +RE+G LL +M++ R GS AE+G+MKI Sbjct: 70 IGSLLAIEVGNLLEDFGAKTMLGRSTSISVIRELGPLLMGLMLSARFGSRNGAELGAMKI 129 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 +E+IDA+R G D + L+ PR+ A +I LT L++F+ + A+ + Y+ + +F Sbjct: 130 SEQIDALRAFGTDPIAKLVMPRLVAALIMFLPLTALSDFAGLYSAAYMAEHYHHLDPGIF 189 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 ++ + L + G KAP A I +V+ GF+ + +G+ +V S +V Sbjct: 190 WNSVYPRLALKDFVVGFAKAPVFAVIITLVSSFNGFSASGGTAGVGRSTIKGIVVSSGLV 249 Query: 358 IIIDS 362 +I + Sbjct: 250 LIANF 254 >gi|296179480|gb|ADG96485.1| SupA [Gordonia cholesterolivorans] Length = 257 Score = 189 bits (480), Expect = 8e-46, Method: Composition-based stats. Identities = 53/247 (21%), Positives = 101/247 (40%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 I + + +G E + + L+ Q +++ + +L+S Sbjct: 8 AIGKARNGVQTVGSFFLTFWEILKALPRRPFQWRELVAQAWFIASVSIVPTMLMSIPFCV 67 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 ++ Q L++ GA S I +REIG ++T +++AG +AI A++GS I EE Sbjct: 68 MVVFQINVLLNEIGAIDLSGAGAGIAVIREIGPIVTVLVVAGAGATAICADLGSRTIREE 127 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+R +G+D ++ L PR+ A + L L + G + + + Sbjct: 128 IDAMRVLGIDPIQRLAVPRVIASCVVAVFLNGLVTAIGLTGGYLYGVFLQGATPGQYITA 187 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 +++ +KA +VA GF G +G V VV S ++ + Sbjct: 188 IPILTGTSDLLISELKAGIFGLLAAVVACHLGFKAGGGPKGVGDAVNQTVVLSFVLLFLA 247 Query: 361 DSLFAIF 367 +++ Sbjct: 248 NAVITTL 254 >gi|224025978|ref|ZP_03644344.1| hypothetical protein BACCOPRO_02729 [Bacteroides coprophilus DSM 18228] gi|224019214|gb|EEF77212.1| hypothetical protein BACCOPRO_02729 [Bacteroides coprophilus DSM 18228] Length = 247 Score = 189 bits (480), Expect = 8e-46, Method: Composition-based stats. Identities = 66/243 (27%), Positives = 111/243 (45%), Gaps = 1/243 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + G A + + + I +M +G++ + +V+LISF GAVI Q Sbjct: 5 ISTLGKYLMLMGRVFARPERIRMYFKQYINEMVQLGINSIGIVLLISFFIGAVICIQIKL 64 Query: 189 QLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + F + + + L E + +++AG+ GS I +EIG+M++ ++IDA+ M Sbjct: 65 NIESPWMPRFVVGYTTREILLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALEIM 124 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ LI P+I L+ +PLL I + F+ IIGA W + Sbjct: 125 GINSASYLILPKILGLMTIIPLLVIFSIFAGIIGAFCTAWFAGIMNATDLEYGLQYCFIE 184 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 I+ IK+ F A I V+ G+ V S ++GK T VV S +++ D + Sbjct: 185 WYIWCSFIKSLFFAFIIASVSAYFGYTVEGGSIAVGKASTDSVVSSSVLILFSDLILTQL 244 Query: 368 YFA 370 Sbjct: 245 LMG 247 >gi|78223740|ref|YP_385487.1| hypothetical protein Gmet_2543 [Geobacter metallireducens GS-15] gi|78194995|gb|ABB32762.1| protein of unknown function DUF140 [Geobacter metallireducens GS-15] Length = 253 Score = 188 bits (479), Expect = 8e-46, Method: Composition-based stats. Identities = 57/241 (23%), Positives = 116/241 (48%), Gaps = 1/241 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 L + ++ + I Q+ +GV + +V L TG V+A Q Sbjct: 10 FLQELQAFFVLSARAVVRIFRRPWYYREFITQLDKMGVGSLFIVCLTGLFTGMVMALQAL 69 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL F A + ++++ ++E+G +L+++M+AGR GS+I AE+G+M + E++DA+R Sbjct: 70 IQLKPFAATSYVGGMVAVTMVKELGPVLSSLMVAGRVGSSITAELGTMVVTEQVDAMRVE 129 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G D + L++ R+ A+++++PLL ++ + A++G ++ YDI +++ Sbjct: 130 GTDIITRLVTSRLKAMLVAMPLLAVVTDALALLGGYVIASG-YDINLLMYWKSLSQFMVF 188 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ G+ K I ++ G + +G VV S +V++ D Sbjct: 189 QDLVEGVAKPFVFGFLIAMIGSYAGLTTSGGAEGVGAAAKRAVVVSSIMVLVCDFFMTKI 248 Query: 368 Y 368 + Sbjct: 249 F 249 >gi|56417212|ref|YP_154286.1| hypothetical protein AM1212 [Anaplasma marginale str. St. Maries] gi|222475576|ref|YP_002563993.1| hypothetical protein AMF_912 [Anaplasma marginale str. Florida] gi|254995379|ref|ZP_05277569.1| hypothetical protein AmarM_05554 [Anaplasma marginale str. Mississippi] gi|255003566|ref|ZP_05278530.1| hypothetical protein AmarPR_05019 [Anaplasma marginale str. Puerto Rico] gi|255004692|ref|ZP_05279493.1| hypothetical protein AmarV_05379 [Anaplasma marginale str. Virginia] gi|56388444|gb|AAV87031.1| hypothetical protein AM1212 [Anaplasma marginale str. St. Maries] gi|222419714|gb|ACM49737.1| Conserved hypothetical protein [Anaplasma marginale str. Florida] Length = 259 Score = 188 bits (479), Expect = 8e-46, Method: Composition-based stats. Identities = 58/249 (23%), Positives = 112/249 (44%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 +G + + A + RQ + + +P+V + + TG Sbjct: 10 AVGRYFIGLVVPVGRMSIFCAKSVALGALPPYYFPIAARQFFEMWFFSLPIVGMTALFTG 69 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 + Q A F ++++ +RE+G +L +++AGR G+A+ AEIG+M+I E Sbjct: 70 GALVLQDTLVGGGKVAAHFMAGIVTVAIVRELGPVLIGLIVAGRVGAAVAAEIGTMRITE 129 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +IDA+ T+ D + L++PR+ AL++++P+L I +F I G V + Sbjct: 130 QIDALDTLEADPFQYLVAPRVIALMVAMPVLIIYTDFLGIFGGYAVGTLGLGYNPNEYIG 189 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 ++ GL+KA I +V G+ + +G T VV S ++++ Sbjct: 190 GVAEFLRFKDVTEGLVKAVSFGFVIAMVGCYSGYYCSGGARGVGAATTNTVVSSSMLIVL 249 Query: 360 IDSLFAIFY 368 ++ + +FY Sbjct: 250 LNYVITVFY 258 >gi|284034023|ref|YP_003383954.1| hypothetical protein Kfla_6152 [Kribbella flavida DSM 17836] gi|283813316|gb|ADB35155.1| protein of unknown function DUF140 [Kribbella flavida DSM 17836] Length = 275 Score = 188 bits (479), Expect = 1e-45, Method: Composition-based stats. Identities = 56/255 (21%), Positives = 110/255 (43%), Gaps = 6/255 (2%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVV 171 + K +N L + S +++ +L L+ ++ V V V+ Sbjct: 8 VKKPLNSLDRLGEQLAFYLKALAWSGRSVTRYRKEILRLLAEVTLGTGALAVIGGTVGVI 67 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 ++F TG + QG L+Q G F+ + + + REIG L+ + +A G A+ Sbjct: 68 TFLAFFTGTEVGLQGYSALNQIGTSAFAGFVSAYINTREIGPLIAGIALAATVGCGFTAQ 127 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 +G+M+I+EEIDA+ M + + L++ RI A +I++ L ++ S+ + + +Y Sbjct: 128 LGAMRISEEIDALEVMAIPSLPFLVTTRIIAGLIAVVPLYVVGLLSSYFATRLTVTTFYG 187 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 + FH ++ K A + +V G+ +G V V Sbjct: 188 QSTGTYDHYFHLFLPPGDVLWSFGKVLVFAVLVILVHCYHGYHASGGPAGVGVAVGRAVR 247 Query: 352 QSISIVIIIDSLFAI 366 SI ++ ++D L ++ Sbjct: 248 TSIVVINVVDLLLSM 262 >gi|302551012|ref|ZP_07303354.1| ABC transporter integral membrane protein [Streptomyces viridochromogenes DSM 40736] gi|302468630|gb|EFL31723.1| ABC transporter integral membrane protein [Streptomyces viridochromogenes DSM 40736] Length = 271 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 57/254 (22%), Positives = 109/254 (42%), Gaps = 9/254 (3%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVI 172 +K + +Q G ++ TG ++K +L L+ ++ + V V V+ Sbjct: 8 LKALEALGTQLSFYGRSLAWTGRTLR---RYKKEVLRLLAEVSFGRGALAVVGGTVGVIA 64 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 +SF TG + QG L+Q G F L + REI L+ + ++ G+ A++ Sbjct: 65 FLSFFTGTEVGLQGYAALNQLGTSNFVAFLSAYFNTREIAPLVAGLALSATVGAGFTAQL 124 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 G+M+I+EE DA+ MG+ + L++ R+ A +++ L ++ S+ + A + YY Sbjct: 125 GAMRISEETDALEVMGVPSLPFLVTTRMIAGFVAVIPLYVIGLLSSYLAARTITTGYYGQ 184 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 + F ++ K A I +V G+ +G V V Sbjct: 185 STGTYDHYFQQYLPPVDVLWSFGKVLVFAVLIILVHCFYGYHASGGPAGVGVAVGRAVRT 244 Query: 353 SISIVIIIDSLFAI 366 SI + ++D ++ Sbjct: 245 SIVAINVLDLFLSL 258 >gi|53715368|ref|YP_101360.1| hypothetical protein BF4084 [Bacteroides fragilis YCH46] gi|253567257|ref|ZP_04844707.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|265767855|ref|ZP_06095387.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|52218233|dbj|BAD50826.1| conserved hypothetical protein [Bacteroides fragilis YCH46] gi|251944088|gb|EES84607.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|263252527|gb|EEZ24055.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 247 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 62/247 (25%), Positives = 115/247 (46%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G I G + + + F I+++ +GV+ + +V+LISF GAVI Sbjct: 1 MIKALRTVGRYIMLMGRTFSRPERMRMFFRQYIKEIEQLGVNSIGIVLLISFFIGAVITI 60 Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + +++ ++ + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 61 QIKLNIESPWMPRWTVGYVTREILLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I A++ +P+L + F+ IIGA W + Sbjct: 121 LEIMGVNSANYLILPKITAMVTMIPILVTFSIFAGIIGAFATCWFGGIMTATDLEYGLQY 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 ++ G+IK+ F A I V+ G+ V S +GK T VV S +++ D + Sbjct: 181 MFVEWFVWCGIIKSLFFAFIIASVSSFFGYTVEGGSIEVGKASTDSVVSSSVLILFADLV 240 Query: 364 FAIFYFA 370 Sbjct: 241 LTKLLMG 247 >gi|194337270|ref|YP_002019064.1| protein of unknown function DUF140 [Pelodictyon phaeoclathratiforme BU-1] gi|194309747|gb|ACF44447.1| protein of unknown function DUF140 [Pelodictyon phaeoclathratiforme BU-1] Length = 264 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 62/247 (25%), Positives = 120/247 (48%), Gaps = 4/247 (1%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K +++ + + + + K K + + Q G +P+V++ + Sbjct: 12 KLVLRLKDFFLTMQDFF----LFSLRAFMAMPKIKRYWRDFLDQAGICGTDSIPIVLVSA 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 GA++A + L FGA+ ++ +RE+G LL +M++ R GS AE+G+M Sbjct: 68 ISIGALLAIEVGNLLEDFGAKTMLGRSTALSVIRELGPLLMGLMLSARFGSRNGAELGAM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 +I+E+IDA+R G D + L+ PR+ A +I LT L++F+ + A+ + Y+ I Sbjct: 128 QISEQIDALRAFGTDPIAKLVMPRLVAALIMFLPLTALSDFAGLQSAAYMAEHYHRIDPG 187 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 +F++ + + G +KAP A I +V+ GF+ + +G+ +V S Sbjct: 188 IFWNAVYPRLAPKDFVVGFLKAPVFAIIITLVSSFNGFSARGGTAGVGRATIKGIVVSSG 247 Query: 356 IVIIIDS 362 +V+I + Sbjct: 248 LVLIANF 254 >gi|325003316|ref|ZP_08124428.1| putative ABC-transporter integral membrane protein [Pseudonocardia sp. P1] Length = 259 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 61/240 (25%), Positives = 105/240 (43%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G I E S + L LI Q ++V L + GA IA Sbjct: 14 VGKFIGLGAEIGKQSLRRPFQLRELIEQTWFVTKVSALPTALFTIPFGATIALLLGELTR 73 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 QFGA+ + + +++ ++TA++I+G GSA+ A++G+ I EEI A+ +G+ Sbjct: 74 QFGAQSQTGAGAVLAIVQQAAPIVTALLISGAGGSAVCADLGARTIREEIAAMEVLGISP 133 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 ++ L+ PR+ A+ I+ +L LA + G + S F + A +++I Sbjct: 134 IQRLVVPRVLAMGITAVVLNGLATCVGVSGGYFFNVIIQGGSPGAYISSFSAIAQVSDIV 193 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 IKA G+VA G + +G V VV S +V +I+ + Y + Sbjct: 194 VSEIKAFLFGIVAGVVAAYRGLNPPPGAKGVGDAVNQAVVISFVLVFLINLVLTALYLEL 253 >gi|83816537|ref|YP_446599.1| hypothetical protein SRU_2501 [Salinibacter ruber DSM 13855] gi|294508531|ref|YP_003572590.1| Conserved hypothetical protein, membrane, containing DUF140 domain [Salinibacter ruber M8] gi|83757931|gb|ABC46044.1| domain of unknown function superfamily [Salinibacter ruber DSM 13855] gi|294344860|emb|CBH25638.1| Conserved hypothetical protein, membrane, containing DUF140 domain [Salinibacter ruber M8] Length = 250 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 65/238 (27%), Positives = 113/238 (47%), Gaps = 1/238 (0%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 ++ S LG + G AS K + +L QM VG+ +P+V L + TGA Sbjct: 1 MLDALLSPFRALGRYATLMGRAFASIDKVGTYWNNLFIQMVRVGIDSIPIVALAAAFTGA 60 Query: 181 VIAQQGAFQL-SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V Q A+QL + F + +++ + E+G ++ ++AGR G+ I AE+G+M+++E Sbjct: 61 VFTVQTAYQLETPFIPKTIIGSIVAPSIMLELGAVIAGFILAGRVGARIAAELGTMRVSE 120 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +IDA+ MGL+ V L+ PR+ A ++ P+L +++ I V + + F Sbjct: 121 QIDALEVMGLNSVGFLVLPRVLAGVLMFPVLYVVSCVVGIGTGIGVGHFGGFLSASEFLE 180 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 L + GLIK+ I +A +G+ G + +G T V S + Sbjct: 181 GARQFFKLLDPTIGLIKSFAFGFIITSIACYKGYYTGGGAVGVGDSTTQAAVLSCVFI 238 >gi|269958397|ref|YP_003328184.1| putative ABC transporter [Anaplasma centrale str. Israel] gi|269848226|gb|ACZ48870.1| putative ABC transporter [Anaplasma centrale str. Israel] Length = 259 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 61/264 (23%), Positives = 117/264 (44%), Gaps = 7/264 (2%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 N+ + IG+ + I + + Y F RQ + + Sbjct: 2 NAIVAIFAAIGRYFIGLIIPVGRMSVFCAQ---SVMRGILPPYYFPIA----ARQFFEMW 54 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 +P+V + + TG + Q A F ++++ +RE+G +L +++AGR Sbjct: 55 FFSLPIVGMTALFTGGALVLQDTLVGGGKVAAHFMAGIVTVATVRELGPVLIGLIVAGRV 114 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 G+A+ AEIG+M+I E+IDA+ T+ + + L+ PR+ AL+I++P+L + +F I G Sbjct: 115 GAAVAAEIGTMRITEQIDALDTLEANPFQYLVMPRVIALMIAMPVLIVYTDFLGIFGGYA 174 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 V + ++ GL+KA I +V G+ + +G Sbjct: 175 VGTLGLGYDSNEYLGGVAEFLHFKDVAEGLVKAVSFGFVISLVGCYSGYYCSGGARGVGV 234 Query: 345 KVTTCVVQSISIVIIIDSLFAIFY 368 T VV S ++++++ + +FY Sbjct: 235 ATTNTVVASSMLIVLLNYVITVFY 258 >gi|225677253|ref|ZP_03788238.1| hypothetical protein WUni_007540 [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590703|gb|EEH11945.1| hypothetical protein WUni_007540 [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 187 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 93/185 (50%) Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + Q + E L++I ++E+G +L ++++ G+ GS++ AEIG+M+I E+ID Sbjct: 1 SLQSSLSDPLINQEQIIPKLVTITIIKELGPVLISLIMVGKVGSSVAAEIGTMRITEQID 60 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 + T+ ++ + LI+PRI A II P+LT+ A+ I G I ++ ++ Sbjct: 61 VLTTLNINPFKYLIAPRILASIIVFPILTVCADLIGIFGGCITAVFEFNHNLNIYIKHTA 120 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + TGLIKA I + + G+ + +G T+ VV S ++I+ + Sbjct: 121 QFFNTYDFITGLIKATVFGAIISVSSCYYGYHCKEGARGVGVATTSTVVLSSILIILANY 180 Query: 363 LFAIF 367 + + Sbjct: 181 MITLI 185 >gi|302523958|ref|ZP_07276300.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4] gi|302432853|gb|EFL04669.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4] Length = 262 Score = 188 bits (477), Expect = 2e-45, Method: Composition-based stats. Identities = 56/245 (22%), Positives = 109/245 (44%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 G + + + ++ I+Q ++V + L++ GAVI+ Q Sbjct: 12 GMLRETGNLFALGLDIVRGIFQRPFQFREFIQQAWFVASVTILPTALVAIPFGAVISLQF 71 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 Q GA+ ++ + +++ L+TA+++AG GSA+ A+IG+ I EEIDA+ Sbjct: 72 GALARQLGAQSYTGAGSVLATVQQASPLVTALLVAGAGGSAVCADIGARTIREEIDAMEV 131 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +G+ V+ LI PR A+++ LL + + ++G + S F + A Sbjct: 132 LGVSAVQRLIVPRTLAMMLVALLLNGMVSVIGVLGGYFFNVVLQGGTPGAYLSSFSALAQ 191 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L +++ G IKA +VA G +G V VV + ++ +++ + + Sbjct: 192 LPDLWVGEIKALIFGFIAAVVAAYRGLHPSGGPKGVGDAVNQSVVITFLLLFVVNFVITL 251 Query: 367 FYFAI 371 Y + Sbjct: 252 IYLQL 256 >gi|255011705|ref|ZP_05283831.1| hypothetical protein Bfra3_21365 [Bacteroides fragilis 3_1_12] gi|313149539|ref|ZP_07811732.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313138306|gb|EFR55666.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 247 Score = 188 bits (477), Expect = 2e-45, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 115/247 (46%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G + G + + + F I+++ +GV+ + +V+LISF GAVI Sbjct: 1 MIKALRTVGRYMMLMGRTFSRPERMRMFFRQYIKEIEQLGVNSIGIVLLISFFIGAVITI 60 Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + +++ ++ + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 61 QIKLNIESPWMPRWTVGYVTREILLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I A++ +P+L + F+ IIGA W + Sbjct: 121 LEIMGVNSANYLILPKITAMVTMIPILVTFSIFAGIIGAFATCWFGGIMTATDLEYGLQY 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 ++ G+IK+ F A I V+ G+ V S +GK T VV S +++ D + Sbjct: 181 MFVEWFVWCGIIKSLFFAFIIASVSSFFGYTVEGGSIEVGKASTDSVVSSSVLILFADLV 240 Query: 364 FAIFYFA 370 Sbjct: 241 LTKLLMG 247 >gi|110680422|ref|YP_683429.1| hypothetical protein RD1_3241 [Roseobacter denitrificans OCh 114] gi|109456538|gb|ABG32743.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114] Length = 257 Score = 188 bits (477), Expect = 2e-45, Method: Composition-based stats. Identities = 55/247 (22%), Positives = 107/247 (43%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 S +G + G+ + + Q+ +G +PVV L + TG +A Sbjct: 11 VLSALAAIGRIAIFGGQTIGHLARPPFYAREFATQLLNIGWLSLPVVGLTAVFTGGALAL 70 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q S+F AE ++++ +RE+G +L +MIA R S+I AEI +MK+ E+IDA+ Sbjct: 71 QIYAGGSRFNAEAVVPQIVAVGMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQIDAL 130 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 T+ ++ L PR+ A ++ +PLL + + I G V A + + + Sbjct: 131 VTLSTHPMKYLTVPRVLAAVLVVPLLVAVGDIIGIFGGFAVATGTLGFNAATYINNTVNF 190 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++ + L K ++ G G + +G+ V + +++ + + Sbjct: 191 LEPLDVISSLTKGAVFGFCAALMGCYHGMNSGRGAMGVGRATKGAVEGAAVLILAANFVL 250 Query: 365 AIFYFAI 371 +F + Sbjct: 251 TGVFFTL 257 >gi|299137710|ref|ZP_07030891.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX8] gi|298600351|gb|EFI56508.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX8] Length = 256 Score = 188 bits (477), Expect = 2e-45, Method: Composition-based stats. Identities = 57/237 (24%), Positives = 107/237 (45%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +G + + S + RQ+ G + ++++ F GAV+ Sbjct: 7 LFEFVGKLGLFSLRVVGDSLRPPFEFAQFFRQVAEAGNKSLILIVVSGFALGAVMTLHTR 66 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L FGA + ++ EIG L+ +++AGR GS I A + +M+ E+IDAI ++ Sbjct: 67 STLVMFGATAMIPAVQAVAFFVEIGPLVAGLLLAGRVGSGIGAVLANMRATEQIDAIESL 126 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 +D + L+ PR+ A ++ LP+LT+ +F+ ++G + I ++ +R Sbjct: 127 SIDSFKFLVVPRVLACVVVLPILTLFMDFAGLLGGFLSEGLTSHIGPTLYVNRAFDYIQW 186 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +N +K IG V+ G+ + +G+ T VV S ++I+ D L Sbjct: 187 SNFIAPTLKTTVFGFIIGSVSSYFGYTTDKGAKGVGEAATNSVVLSSLLIIVADVLL 243 >gi|206602089|gb|EDZ38571.1| Probable ABC transporter, permease [Leptospirillum sp. Group II '5-way CG'] Length = 251 Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 56/248 (22%), Positives = 118/248 (47%), Gaps = 4/248 (1%) Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 D L++S + + + ++ + QM +GV +P+V L S G +A Sbjct: 3 DLFQSMGDFALMVSKSFRYMVTHFR----TGDTLIQMDRIGVGSIPIVFLASIFAGLDMA 58 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q ++ +GA +++ +R++G +L +++++ R + I +E+G M ++IDA Sbjct: 59 LQFEVVMAPYGARALLGKVVTTSIIRDMGPVLASLVMSARVTAGISSELGMMNSTQQIDA 118 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R MG+D + L++PRI+A I+ +P+L+I +F A++ + +P +F+S Sbjct: 119 LRVMGVDPLDRLVAPRIFAGIVMMPILSISGDFLALLAGLGISMAVGHVPAPLFWSGVRD 178 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 T N+ +K F + + G + +GK T VV + +++ + L Sbjct: 179 ALTAQNLTDAFLKPLFFGFILTSIGCYYGMKSASGAFGVGKSTTKAVVSAAIWILVANFL 238 Query: 364 FAIFYFAI 371 + + Sbjct: 239 LSKLLINV 246 >gi|78186330|ref|YP_374373.1| putative ABC transport system permease protein [Chlorobium luteolum DSM 273] gi|78166232|gb|ABB23330.1| putative ABC transport system permease protein [Chlorobium luteolum DSM 273] Length = 256 Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 63/238 (26%), Positives = 117/238 (49%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + A+ K + + + Q G +P+V++ + G+++A Sbjct: 9 IKGFFLTMQDFFFFSVRAFATMPKIRRYWRDFLDQAAICGADSIPIVLVSAISIGSLLAI 68 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 + L FGA+ SI +RE+G LL +M++ R GS AE+G+M+I+E+IDA+ Sbjct: 69 EVGNLLEDFGAKTMLGRSTSISVIRELGPLLMGLMLSARFGSRNGAELGAMQISEQIDAL 128 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R G D V L+ PR+ A +I LT L++F+ + A+ + Y+ + +F++ + Sbjct: 129 RAFGTDPVAKLVMPRLLAALIMFLPLTALSDFAGLYSAAYMAEHYHHLDPGIFWNSVYPR 188 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L + G KAP A I +V+ GF+ ++ +G+ +V S +V+I + Sbjct: 189 LALKDFVVGFAKAPVFAVIITLVSSFNGFSASGGTSGVGRSTIKGIVVSSGLVLIANF 246 >gi|254495378|ref|ZP_05108302.1| ABC transporter, permease protein [Polaribacter sp. MED152] gi|85819732|gb|EAQ40889.1| ABC transporter, permease protein [Polaribacter sp. MED152] Length = 234 Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 53/230 (23%), Positives = 97/230 (42%), Gaps = 1/230 (0%) Query: 141 EFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ-FGAEIFS 199 + K + F +L++++ +G+ + +++ ISF G VIA Q A L F Sbjct: 4 QVFKRPQKARVFYDALLKEIEELGLKSLGIILFISFFIGGVIALQTALNLDSAFIPRSLI 63 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 + E ++++AG+ GS I + IG+M++ E+IDA+ MG++ + L+ P+ Sbjct: 64 GFAAKRSIILEFAPTFCSIILAGKVGSYITSSIGTMRVTEQIDALEVMGINSLNHLVLPK 123 Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319 + A + P L L + G + + + I LIK Sbjct: 124 VIATVFFYPFLITLGMVLGMFGGWLAGVLSGLFSGVNYIEGLQTDFQPFLIVYALIKTLV 183 Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 A I V G+ V S ++GK T VV + +++I + Sbjct: 184 FAFLIATVPSYHGYYVKGGSIAVGKASTQSVVWTTILIVIANYFLTQMLL 233 >gi|313206130|ref|YP_004045307.1| hypothetical protein Riean_0637 [Riemerella anatipestifer DSM 15868] gi|312445446|gb|ADQ81801.1| protein of unknown function DUF140 [Riemerella anatipestifer DSM 15868] Length = 253 Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 58/249 (23%), Positives = 106/249 (42%), Gaps = 3/249 (1%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 S +G + G+ K F L+R++ +GV+ +V+ S GAV+A Sbjct: 5 SKRMLTSVGEYVLLLGKVIKRPQKHNIFFKLLMREINDLGVNSFGLVLFTSIFVGAVVAI 64 Query: 185 QGAFQLSQFGAEI---FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 Q I F ++ + E + ++++AG+ GS I + IG+M++ E+I Sbjct: 65 QMYNNFKASTIPIPLYFIGYATKVVLILEFSPTIISLILAGKVGSYIASSIGTMRVTEQI 124 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ MG++ LI P+I A +I PLL ++ I G + + A + + Sbjct: 125 DALDIMGVNSPNFLILPKIVANVIFNPLLIAISIVFGIYGGYLAGVATGNWTEADYITGI 184 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 I+ K A I + G+ V S +G+ T VV ++ +II + Sbjct: 185 QRYIPDYFIWYAFFKTVVFAFLIATIPAYFGYNVKGGSLEVGRASTQAVVWTMVAIIIAE 244 Query: 362 SLFAIFYFA 370 + + + Sbjct: 245 LVSTQLFLS 253 >gi|282900961|ref|ZP_06308894.1| protein of unknown function DUF140 [Cylindrospermopsis raciborskii CS-505] gi|281194052|gb|EFA69016.1| protein of unknown function DUF140 [Cylindrospermopsis raciborskii CS-505] Length = 259 Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 57/228 (25%), Positives = 104/228 (45%) Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198 G+ + K + ++ VG + V+L+S G + Q A +L +FGA Sbjct: 25 FGQISLHIIQGKTYYRKILDHALKVGPGSLSPVLLVSGFAGMIFTIQTARELIRFGAVDN 84 Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258 ++ RE+ +LTA +IAG+ GSA AEIG+M++ E+IDA+ + D + L+ P Sbjct: 85 LGGAFAVAFCRELAPILTASVIAGQVGSAFAAEIGAMQVTEQIDALYLLKTDPIDYLVLP 144 Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318 R+ A + +P++ I A + G ++Y + F T ++ ++K Sbjct: 145 RVIACGLMMPVMMIFALIMGVSGGIFAGLQFYQVQPENFLESVRDFLTPGDMMMIIVKGV 204 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + + G + +G+ TT VV + ++ I D L A+ Sbjct: 205 IFGIIVAVNGCSWGLTTRGGAKEVGESATTAVVTTWVVLFITDFLLAL 252 >gi|118581609|ref|YP_902859.1| hypothetical protein Ppro_3208 [Pelobacter propionicus DSM 2379] gi|118504319|gb|ABL00802.1| protein of unknown function DUF140 [Pelobacter propionicus DSM 2379] Length = 256 Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 60/244 (24%), Positives = 117/244 (47%), Gaps = 1/244 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 H L S G A ++ + + Q +G + + + +L +G V+A Sbjct: 10 LIRFFHGLQSYFSLGGGMLARIFRRPSYYREFVVQFDKLGFASLFICLLTGLFSGMVMAL 69 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q QL F A + +++ ++E+G +L ++M+AGR GSAI AE+G+M + E++DA+ Sbjct: 70 QALIQLKPFAATSYVGGMVAATMIKELGPVLASLMVAGRGGSAITAELGTMVVTEQVDAM 129 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R G D ++ L +PR+ A+++++PLLT+ + +++G ++ Y I ++ S Sbjct: 130 RVEGTDIIQRLATPRLKAMLLAMPLLTVATDVISLVGGYVMSAG-YGINPIMYVSGLSQF 188 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++ GL+K F I + G + +G VV S +++ D Sbjct: 189 MVFQDLIEGLVKPLFFGLIIAVTGCYVGLNTRGGAEGVGAAAKQAVVLSSVTILVSDFFI 248 Query: 365 AIFY 368 + + Sbjct: 249 SKIF 252 >gi|315022937|gb|EFT35960.1| ABC-type transport system involved in resistance to organic solvents, permease component [Riemerella anatipestifer RA-YM] gi|325336426|gb|ADZ12700.1| ABC-type transport system involved in resistance to organic solvents, permease component [Riemerella anatipestifer RA-GD] Length = 253 Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 58/249 (23%), Positives = 106/249 (42%), Gaps = 3/249 (1%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 S +G + G+ K F L+R++ +GV+ +V+ S GAV+A Sbjct: 5 SKRMLTSVGEYVLLLGKVIKRPQKHNIFFKLLMREINDLGVNSFGLVLFTSIFVGAVVAI 64 Query: 185 QGAFQLSQFGAEI---FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 Q I F ++ + E + ++++AG+ GS I + IG+M++ E+I Sbjct: 65 QMYNNFKASTIPIPLYFIGYATKVVLILEFSPTIISLILAGKVGSYIASSIGTMRVTEQI 124 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ MG++ LI P+I A +I PLL ++ I G + + A + + Sbjct: 125 DALDIMGVNSPNFLILPKIVANVIFNPLLIAISIVFGIYGGYLAGVATGNWTEADYITGI 184 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 I+ K A I + G+ V S +G+ T VV ++ +II + Sbjct: 185 QRYIPDYFIWYAFFKTVVFAFLIATIPAYFGYNVKGGSLEVGRASTQAVVWTMVAIIIAE 244 Query: 362 SLFAIFYFA 370 + + + Sbjct: 245 LISTQLFLS 253 >gi|124515845|gb|EAY57354.1| probable ABC transporter, permease [Leptospirillum rubarum] Length = 251 Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 56/248 (22%), Positives = 118/248 (47%), Gaps = 4/248 (1%) Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 D L++S + + + ++ + QM +GV +P+V L S G +A Sbjct: 3 DLFQSMGDFTLMVSKSFRYMVTHFR----TGDTLIQMDRIGVGSIPIVFLASIFAGLDMA 58 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q ++ +GA +++ +R++G +L +++++ R + I +E+G M ++IDA Sbjct: 59 LQFEVVMAPYGARALLGKVVTTSIIRDMGPVLASLVMSARVTAGISSELGMMNSTQQIDA 118 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R MG+D + L++PRI+A I+ +P+L+I +F A++ + +P +F+S Sbjct: 119 LRVMGVDPLDRLVAPRIFAGIVMMPILSISGDFLALLAGLGISMAVGHVPAPLFWSGVRD 178 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 T N+ +K F + + G + +GK T VV + +++ + L Sbjct: 179 ALTAQNLTDAFLKPLFFGFILTSIGCYYGMKSASGAFGVGKSTTKAVVSAAIWILVANFL 238 Query: 364 FAIFYFAI 371 + + Sbjct: 239 LSKLLINV 246 >gi|83594240|ref|YP_427992.1| hypothetical protein Rru_A2908 [Rhodospirillum rubrum ATCC 11170] gi|83577154|gb|ABC23705.1| Protein of unknown function DUF140 [Rhodospirillum rubrum ATCC 11170] Length = 275 Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 77/276 (27%), Positives = 143/276 (51%), Gaps = 6/276 (2%) Query: 95 NQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVIS--NTGEFCASSYKFKGF 152 + + + +G+ ++ + + + + + G F + Sbjct: 2 DSPKTKPGLSQALLKAVERLGQGVIAGVAEIGQASLLGAESLYWLVVGRFRGQPVR---- 57 Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 L +++ Q +G+ +P+V++++F G ++A QG + L FGAE + ++ +RE Sbjct: 58 LGAIVEQAMEMGIRALPIVLVMNFTIGMMLAIQGIYSLRMFGAEQQVVLGVAFSVVREFA 117 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 L+T +++AGRSGSAI A +G+M IN+EIDA+ MG+ VR L++P + A ++ +PL+T Sbjct: 118 PLITGILVAGRSGSAIAARLGTMTINQEIDALTVMGIVPVRYLVAPPLIAALVMVPLMTF 177 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 L A++GAS+ + + + FF + L ++ GL K+ A I +V + G Sbjct: 178 LGMLVALLGASLTVRIDLGMSLSAFFHQTLDILRLIDLTHGLGKSALFALQIVLVGVVNG 237 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 +V + +GK T VVQ+IS +I+ D +FA Sbjct: 238 VSVSGGAEGVGKMTTRSVVQAISAIIVTDMVFAFIL 273 >gi|269124784|ref|YP_003298154.1| hypothetical protein Tcur_0519 [Thermomonospora curvata DSM 43183] gi|268309742|gb|ACY96116.1| protein of unknown function DUF140 [Thermomonospora curvata DSM 43183] Length = 288 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 55/205 (26%), Positives = 101/205 (49%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V+ +SF G I QG L GAE F + S +REI ++ AV +A + GSA Sbjct: 77 VFVIFTMSFFVGTEIGLQGYTGLRSIGAESFMGLVGSFANVREITPVIAAVALAAQCGSA 136 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 AE+G+M+I+EEIDA+ MG+ L+ R+ A +I+L L ++A F++ ++ Sbjct: 137 FTAELGAMRISEEIDALEVMGISSFTYLVCTRVLAALIALVPLYLIALFASFFSTRLITT 196 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 +++ + V+ F + ++ IK A A+ + G+ +G+ Sbjct: 197 QFFGLAPGVYDYYFQLYLPMIDLVYSSIKVAVFAFAVIAIHCYYGYYATGGPAGVGRATG 256 Query: 348 TCVVQSISIVIIIDSLFAIFYFAIG 372 + SI +++ ++ L + ++ G Sbjct: 257 RAIRLSIIVIVTLNLLLSYLFWGNG 281 >gi|269128542|ref|YP_003301912.1| hypothetical protein Tcur_4347 [Thermomonospora curvata DSM 43183] gi|268313500|gb|ACY99874.1| protein of unknown function DUF140 [Thermomonospora curvata DSM 43183] Length = 282 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 112/260 (43%), Gaps = 10/260 (3%) Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVS------- 166 G+ + + I ++ G +S A + + + + + R + V + Sbjct: 8 GRALARVIGKPLNRVEDFGHQLSFYARAFAWTLRVLRRYRTEVARLLAEVSLGTGGLAVI 67 Query: 167 --GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V +V ++F TG+ + QG L+Q G ++ + S RE+ L++A+ ++ Sbjct: 68 GGSVAIVGFMTFFTGSQVGLQGYNSLNQIGTAAYTGFVSSYFNTRELAPLVSALALSATV 127 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 G A++G+M+I++EIDA+ M + V L++ R+ A +I++ L ++ ++ + + Sbjct: 128 GCGFTAQLGAMRISDEIDALEVMAVPTVPFLVTTRLLAGMIAVIPLYVVGLLASYLATRL 187 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 ++ +Y + F+ +I K A + ++ GF +G Sbjct: 188 IVTVFYGQSTGTYDHYFNLFLPPYDILWSFGKVIVFAILVMLIHCYYGFHASGGPAGVGV 247 Query: 345 KVTTCVVQSISIVIIIDSLF 364 V V SI ++ + D Sbjct: 248 AVGRAVRTSIVVINLADLFL 267 >gi|282897686|ref|ZP_06305685.1| Protein of unknown function DUF140 [Raphidiopsis brookii D9] gi|281197365|gb|EFA72262.1| Protein of unknown function DUF140 [Raphidiopsis brookii D9] Length = 241 Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats. Identities = 62/235 (26%), Positives = 108/235 (45%) Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198 G+ + K + ++ VG + V+L+S G + Q A +L +FGA Sbjct: 7 FGQISLHIIQGKTYYRKILDHALKVGPGSLSPVLLVSGFAGMIFTIQTARELVRFGAVDN 66 Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258 ++ RE+ LLTA +IAG++GSA AEIG+M++ E+IDA+ + D + L+ P Sbjct: 67 LGGAFAVAFCRELAPLLTASVIAGQAGSAFAAEIGAMQVTEQIDALYLLKTDPIDYLVLP 126 Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318 R+ A + +P++ I A + G ++Y I F T ++ +IK Sbjct: 127 RVIACGLMMPVMMIFALIIGVSGGIFAGLEFYQIQPENFLESVRDFLTPGDMMMIIIKGV 186 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + + G + +G+ TT VV + ++ I D L A+ +GI Sbjct: 187 IFGIIVAVNGCSWGLTTRGGAKEVGESATTAVVTTWVVLFITDFLLALPGITVGI 241 >gi|227206406|dbj|BAH57258.1| AT1G19800 [Arabidopsis thaliana] Length = 201 Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats. Identities = 46/191 (24%), Positives = 97/191 (50%) Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 Q + ++ G ++++ RE+ ++T++++AGR GSA AE+G+M+++E Sbjct: 1 MAFTIQFVREFTRLGLNRSIGGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSE 60 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 + D +R +G D + LI+PR+ A ++LP LT++ + ++++ Y I + Sbjct: 61 QTDTLRVLGADPIDYLITPRVIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMD 120 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 H +I + +IK+ I +++ G + +G+ T+ VV S+ + I Sbjct: 121 SAHRALRPWDIVSAMIKSQVFGAIISVISCSWGVTTTGGAKGVGESTTSAVVMSLVGIFI 180 Query: 360 IDSLFAIFYFA 370 D + + F+F Sbjct: 181 ADFVLSSFFFQ 191 >gi|313158068|gb|EFR57473.1| conserved hypothetical protein [Alistipes sp. HGB5] Length = 247 Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats. Identities = 61/246 (24%), Positives = 107/246 (43%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 ++G G+ + K + ++ +M +G+ + + +IS GAVI Sbjct: 1 MLKIFELIGRYFILMGKVFSRPEKAAIYRRRIVYEMESLGIDSIGLTAIISVFIGAVITL 60 Query: 185 QGAFQL-SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q L S F + E + A+++AG+ GS+I +EIG+M+I E+IDA Sbjct: 61 QMCINLDSPFIPRSLVGYATRETMILEFSSTVVALILAGKVGSSIASEIGTMRITEQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I A ++ P LTIL+ IIG + + + A + Sbjct: 121 LEIMGVNSASYLILPKIVAAVVFFPFLTILSIAIGIIGGWAIAYLTGIMIPADYIDGLLM 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +I LIK A I ++ G+ +S +G T VV S +++I + + Sbjct: 181 DFKPYSIVYSLIKTAVFAYIITSISAFYGYYAKGNSLEVGAASTRAVVASSVVIMIFNLI 240 Query: 364 FAIFYF 369 Sbjct: 241 LTQVLL 246 >gi|312131750|ref|YP_003999090.1| hypothetical protein Lbys_3075 [Leadbetterella byssophila DSM 17132] gi|311908296|gb|ADQ18737.1| protein of unknown function DUF140 [Leadbetterella byssophila DSM 17132] Length = 243 Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats. Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 1/238 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 G + E K + I + +G+ + +V +++F GAV Q L Sbjct: 5 FGKFLLFLYELFTRRESLKVYWKRFIDECMMIGIDSLLIVCIVAFFIGAVTCVQINANLV 64 Query: 192 QFGAEIFSI-DLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 + + +++ + L E+ V++AG+ GS I +E+G+M+I E+I+A+ MG++ Sbjct: 65 SPIIPTYIVSNIVRDMMLLELSSTFICVILAGKVGSNIASELGTMRITEQIEALEVMGIN 124 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 L+ P++ A + P+L IL+ F I+G I I + + N+ Sbjct: 125 AASYLVLPKVLAAFVMFPILAILSGFIGIVGGYIAGTATGIITPEQYIYGIRFSFIPFNL 184 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 +IK+ I ++ +GF + +GK TT V S ++I D L A Sbjct: 185 VIPIIKSAVFGVLIATISAYKGFYTRGGALEVGKVSTTAVTNSCIAILIADYLLAELL 242 >gi|119356498|ref|YP_911142.1| hypothetical protein Cpha266_0663 [Chlorobium phaeobacteroides DSM 266] gi|119353847|gb|ABL64718.1| protein of unknown function DUF140 [Chlorobium phaeobacteroides DSM 266] Length = 264 Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats. Identities = 59/238 (24%), Positives = 115/238 (48%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + + K K + + Q G +P+V++ + G+++A Sbjct: 17 LKDFFLTMQEFFMFSVRAFLTIPKIKRYWRDFLDQATICGTDSIPIVLVSAISIGSLLAI 76 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 + L FGA+ SI +RE+G LL +M++ R G+ AE+G+M+I+E+IDA+ Sbjct: 77 EVGNLLEDFGAKTMLGRSTSISVIRELGPLLMGLMLSARFGARNGAELGAMQISEQIDAL 136 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R G D V L+ PR+ A ++ LT L++F+ + A+ + Y+ + +F++ + Sbjct: 137 RAFGTDPVAKLVMPRLIAALVMFLPLTALSDFAGLHSAAYMAEHYHRLDPGMFWNAVYPR 196 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + G +KAP A I +V+ GF+ + +G+ +V S +V++ + Sbjct: 197 LAPKDFVVGFVKAPVFAIIITLVSSFNGFSARGGTAGVGRSTIKGIVVSSGLVLVANF 254 >gi|302525041|ref|ZP_07277383.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4] gi|302433936|gb|EFL05752.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4] Length = 257 Score = 186 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 54/245 (22%), Positives = 109/245 (44%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + H G + + + +++ L++Q +++ + L+S GAVIA Sbjct: 7 AALHQTGRLYALGLDVVRLTFRRPFQFRELVQQFWFIASVSILPTALVSIPFGAVIALHI 66 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 +Q GA+ F+ + +++ ++TA++IAG GSA+ A++GS I EEIDA+ Sbjct: 67 GSLTTQIGAQSFTGAASVLAIIQQASPIVTALLIAGAGGSAMCADLGSRTIREEIDAMEV 126 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +G+ ++ LI PR+ A + L + + ++G + + F + A Sbjct: 127 LGVSPIQRLIVPRVLAAMGVAVFLNGMVSVVGVLGGYFFNVIMQGGTPGAYLASFSALAQ 186 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L +++ IKA +VA G +G V VV + ++ +++ + Sbjct: 187 LPDLWISEIKALLFGFVAAVVASYRGLNPRGGPKGVGDAVNQSVVITFLLLFVLNLILTT 246 Query: 367 FYFAI 371 Y + Sbjct: 247 VYLQL 251 >gi|300783703|ref|YP_003763994.1| ABC transporter permease [Amycolatopsis mediterranei U32] gi|299793217|gb|ADJ43592.1| ABC transport system permease protein [Amycolatopsis mediterranei U32] Length = 264 Score = 186 bits (473), Expect = 4e-45, Method: Composition-based stats. Identities = 56/245 (22%), Positives = 108/245 (44%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + G + + +++ LI+Q +++ + L+S GAVIA Sbjct: 14 AALRQTGRLYGLGLDVVRLTFRRPFQARELIQQFWFIASVSILPTALVSIPFGAVIALHI 73 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 +Q GA+ F+ + +++ ++TA++IAG GSA+ A++GS I EEIDA+ Sbjct: 74 GSLTTQIGAQSFTGAASVLAIIQQASPIVTALLIAGAGGSAMCADLGSRTIREEIDAMEV 133 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +G+ V+ LI PR+ A + L + + ++G + + F + A Sbjct: 134 LGVSPVQRLIVPRVLAAMGVAVFLNGMVSVVGVLGGYFFNVIMQHGTPGAYLASFSALAQ 193 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L +++ IKA G+VA G +G V VV + ++ +++ + Sbjct: 194 LPDLWISEIKALIFGFVAGVVASYRGLNPKGGPKGVGDAVNQSVVITFLLLFVLNLILTT 253 Query: 367 FYFAI 371 Y + Sbjct: 254 VYLQL 258 >gi|193213347|ref|YP_001999300.1| hypothetical protein Cpar_1708 [Chlorobaculum parvum NCIB 8327] gi|193086824|gb|ACF12100.1| protein of unknown function DUF140 [Chlorobaculum parvum NCIB 8327] Length = 265 Score = 186 bits (473), Expect = 5e-45, Method: Composition-based stats. Identities = 63/252 (25%), Positives = 120/252 (47%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170 IG + + + ++ K K + ++ Q GV +P+ Sbjct: 3 LTLIGNFVDSKVLQLKELLLTMQEFFYFALRAFSTLPKAKRYWRDVLDQALICGVESIPI 62 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 V++ S GA+++ + L +FGA+ S LRE+G LL +M++ R GS A Sbjct: 63 VLVSSISIGALMSMEVGNLLEEFGAKTMLGRSTSNAVLRELGPLLMGLMLSARYGSRNGA 122 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 E+G+M+I+E+IDA+R G D + L+ PR+ A +I L L++F+ + A++V Y+ Sbjct: 123 ELGAMQISEQIDALRAFGTDPIAKLVMPRLLAALIMFVPLIALSDFAGLQTAALVAQFYH 182 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 + +F++ + + +KAP A I +V+ GF+ + +G+ + Sbjct: 183 KLDPGIFWNSIYPRLLPKDFVVSFLKAPVFAIIITLVSSFNGFSAHGGTAGVGRSTIKGI 242 Query: 351 VQSISIVIIIDS 362 V S +V++ + Sbjct: 243 VASSGLVLVANF 254 >gi|153809065|ref|ZP_01961733.1| hypothetical protein BACCAC_03373 [Bacteroides caccae ATCC 43185] gi|149128398|gb|EDM19617.1| hypothetical protein BACCAC_03373 [Bacteroides caccae ATCC 43185] Length = 247 Score = 186 bits (472), Expect = 6e-45, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 114/247 (46%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G G + + + F + ++ +GV+ + +V+LISF GAVI Sbjct: 1 MIKALRTVGRYFMLMGRTFSRPERMRMFFRQYLNELEQLGVNSIGIVLLISFFIGAVITI 60 Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + +++ ++ + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 61 QIKLNIESPWMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I A++ +P+L + F+ IIGA W + Sbjct: 121 LEIMGVNSANYLILPKIAAMVTVIPILVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQY 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 I+ G+IK+ F A I V+ G+ V S ++GK T VV S +++ D + Sbjct: 181 MFNEWFIWAGIIKSLFFAFIIASVSAFFGYTVEGGSIAVGKASTDSVVSSSVLILFADLI 240 Query: 364 FAIFYFA 370 Sbjct: 241 LTKLLMG 247 >gi|331699196|ref|YP_004335435.1| hypothetical protein Psed_5449 [Pseudonocardia dioxanivorans CB1190] gi|326953885|gb|AEA27582.1| protein of unknown function DUF140 [Pseudonocardia dioxanivorans CB1190] Length = 259 Score = 185 bits (471), Expect = 7e-45, Method: Composition-based stats. Identities = 56/240 (23%), Positives = 106/240 (44%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G + + + +++ L I Q ++V L + GA IA A Sbjct: 14 VGQLFALGVDIVRMTFRRPFQLGEYIEQTWFVTKVSALPTALFTIPFGATIALLLAELTR 73 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 QFGA+ + + +++ ++TA++I+G GSA+ A++G+ I EEI A+ +G+ Sbjct: 74 QFGAQSQTGAGSVLAIVQQAAPIVTALLISGAGGSAVCADLGARTIREEIAAMEVLGISP 133 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 ++ L+ PR+ A+ + +L LA + G + + F + A +++I Sbjct: 134 IQRLVVPRVLAMATTALVLNGLATVVGVAGGYFFNVVVQGGTPGAYIASFSAIAQVSDIV 193 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +KA G+VA G + +G V VV S +V +I+ + Y I Sbjct: 194 VSEVKAALFGFTAGVVAAYRGLNPPPGAKGVGDAVNQAVVISFVLVFLINLILTALYLQI 253 >gi|88803715|ref|ZP_01119239.1| hypothetical protein PI23P_00445 [Polaribacter irgensii 23-P] gi|88780448|gb|EAR11629.1| hypothetical protein PI23P_00445 [Polaribacter irgensii 23-P] Length = 246 Score = 185 bits (471), Expect = 7e-45, Method: Composition-based stats. Identities = 57/239 (23%), Positives = 102/239 (42%), Gaps = 1/239 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL- 190 +G KF F +L++++ +G+ + +++ ISF G VIA Q A L Sbjct: 7 VGKYFMMLRLVFKRPQKFHIFYTALMKEIEDLGLKSIGIIMFISFFIGGVIALQTALNLD 66 Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 S F + + E +++AG+ GS I + IG+M++ E+IDA+ MG++ Sbjct: 67 SPFIPDSLIGFAAKRSIILEFAPTFCCIILAGKVGSYITSSIGAMRVTEQIDALEVMGIN 126 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 + L+ P+I A + P L ILA I G + + + I Sbjct: 127 ALNFLVLPKILAALFFYPFLIILAMVLGIFGGWLAGVASGLFSGVDYIIGIQTEFNSFLI 186 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 +IK + I V G+ V S ++G+ T VV + +++I + + Sbjct: 187 VYAMIKTLVFSFIIATVPAYHGYYVKGGSIAVGRASTQAVVWTTILIVISNYILTQLLL 245 >gi|255693535|ref|ZP_05417210.1| ABC transporter, permease [Bacteroides finegoldii DSM 17565] gi|260620673|gb|EEX43544.1| ABC transporter, permease [Bacteroides finegoldii DSM 17565] Length = 247 Score = 185 bits (470), Expect = 9e-45, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 114/247 (46%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G G + + + F + ++ +GV+ + +V+LISF GAVI Sbjct: 1 MIKALRTVGRYFMLMGRTFSRPERMRMFFRQYLNELEQLGVNSIGIVLLISFFIGAVITI 60 Query: 185 QGAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + +++ ++ + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 61 QIKLNIESPWMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I A++ +P+L + F+ IIGA W + Sbjct: 121 LEIMGVNSANYLILPKITAMVTVIPILVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQY 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 I+ G+IK+ F A I V+ G+ V S ++GK T VV S +++ D + Sbjct: 181 MFNEWFIWAGIIKSLFFAFIIASVSAFFGYTVDGGSIAVGKASTDSVVSSSVLILFADLV 240 Query: 364 FAIFYFA 370 Sbjct: 241 LTKLLMG 247 >gi|213584877|ref|ZP_03366703.1| hypothetical protein SentesTyph_28030 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 179 Score = 185 bits (470), Expect = 9e-45, Method: Composition-based stats. Identities = 57/177 (32%), Positives = 94/177 (53%), Gaps = 1/177 (0%) Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ E++ ++ M +D +R Sbjct: 2 AETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRR 61 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTG 313 +ISPR WA +ISLPLLTI+ I G S+V + I F+S + ++ Sbjct: 62 VISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGFFWSAMQNAVDWRMDLVNC 121 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 LIK+ A + +A+ G+ S + + T VV + V+ +D + F Sbjct: 122 LIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASLAVLGLDFVLTALMFG 178 >gi|325281943|ref|YP_004254485.1| hypothetical protein Odosp_3346 [Odoribacter splanchnicus DSM 20712] gi|324313752|gb|ADY34305.1| protein of unknown function DUF140 [Odoribacter splanchnicus DSM 20712] Length = 245 Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats. Identities = 60/243 (24%), Positives = 111/243 (45%), Gaps = 1/243 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + LG + + + K + +I + +G++ + +V++ISF GAV+ Q A Sbjct: 3 FLYKLGSYLIFIRKAFSRPEKRSVYTKEVIVEFEKLGLNSIVLVVIISFFIGAVLTLQTA 62 Query: 188 FQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 + + + L L E + ++++AG+ GS I +EIGSM+I E+I+A+ T Sbjct: 63 YNMQSPLLPRYLIGYLTRETMLLEFSSTIVSLILAGKIGSNIASEIGSMRITEQIEALET 122 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG++ V L+ P+I A ++ P+L I + F I+G I + F F H + Sbjct: 123 MGVNSVSYLVGPKILASLVINPILYIFSVFIGILGGIISGLISGVVNFEDFVYGLHFSFN 182 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + ++K F A + G+ V + +GK T VV S ++ + + Sbjct: 183 PYYVTYSIVKTLFFAFIFTSIPAFYGYYVQGGAREVGKAGTKAVVDSSIAILTANLVLTQ 242 Query: 367 FYF 369 Sbjct: 243 IML 245 >gi|330444642|ref|YP_004377628.1| ABC transporter permease [Chlamydophila pecorum E58] gi|328807752|gb|AEB41925.1| ABC transporter, permease protein [Chlamydophila pecorum E58] Length = 271 Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats. Identities = 65/228 (28%), Positives = 112/228 (49%), Gaps = 1/228 (0%) Query: 142 FCASSYKFKGFLLSLI-RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSI 200 S+ FK L + Q Y +GVS +PVVIL +TG V+A Q +QL +G Sbjct: 40 AVVKSFSFKKCLFHAVCVQGYAIGVSSLPVVILTGVITGVVLALQSYYQLGVYGLSCAIG 99 Query: 201 DLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRI 260 + L EIG +LTA+ ++GR G AI A +G++++ E+I A+ ++G++ + PRI Sbjct: 100 FFVVKSILVEIGPVLTALALSGRVGGAIAAFLGTLRMTEQISAMSSLGVNPLEYFALPRI 159 Query: 261 WALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320 A II++P L I+A +S I ++ + IP ++ ++F ++K+ Sbjct: 160 IAGIITMPALVIIAVWSGIFSGYMICRYAFQIPSQEYWYMVAGHILPFDVFMVIVKSLIF 219 Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 I +A +G + + T VV S +I I+ + + Sbjct: 220 GFFITSLACYQGLGRYRRITGVTEVTTEGVVISYVSIIFINCVITTIF 267 >gi|302036847|ref|YP_003797169.1| putative ABC transporter permease [Candidatus Nitrospira defluvii] gi|300604911|emb|CBK41244.1| putative ABC transporter, permease component [Candidatus Nitrospira defluvii] Length = 291 Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 62/262 (23%), Positives = 124/262 (47%), Gaps = 2/262 (0%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 + + + +G+K + + A + + + + L L+RQ+ + G Sbjct: 28 DGLQRMIEWVGRKAIAGYTYLAALATLFTQAVLDL--LLPTRQGRGETLRVLVRQILFTG 85 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V +PV +I+ + G +I Q QL + GA ++ + +RE+G L+TA ++ GRS Sbjct: 86 VDALPVTTVIALLLGIIIVTQAGTQLPRLGAGGLVGSIIVVTVIRELGPLITAFIVVGRS 145 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 G+AI E+G+M + E+ A+R MG+ R +I PR+ +++S+ LT+ + A++G + Sbjct: 146 GTAIATELGNMSVTREVVALRLMGISISRFVIMPRMVGMVLSMLCLTLYFDVVAVLGGYL 205 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 + IPF F + ++ IK A+ + G AV + + Sbjct: 206 IADAQLTIPFYAFVESITKALSTTDVLMTAIKGLSFGSAVAAICCYHGLAVRSSFTEVPQ 265 Query: 345 KVTTCVVQSISIVIIIDSLFAI 366 + T ++ S + ++ID + + Sbjct: 266 QTTRAMINSFVLCLLIDVVVTV 287 >gi|291515429|emb|CBK64639.1| ABC-type transport system involved in resistance to organic solvents, permease component [Alistipes shahii WAL 8301] Length = 247 Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 63/246 (25%), Positives = 109/246 (44%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 ++G G+ + K + +I +M +GV+ + + +IS GAVI Sbjct: 1 MLKIFELIGRYFMLMGKVFSRPEKAAIYRRRIIFEMESLGVNSIGLTAIISVFIGAVITL 60 Query: 185 QGAFQL-SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q L S F + E + A+++AG+ GS+I +EIG+M+I E+IDA Sbjct: 61 QMCINLDSPFIPRSLVGYATRETMILEFSSAVVALILAGKVGSSIASEIGTMRITEQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I A ++ P LTIL+ I+G ++ + A + Sbjct: 121 LEIMGVNSASYLILPKIVAAMVFFPFLTILSILIGILGGYLIAAATGIMIPADYVDGLLM 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +I LIK F A I ++ G+ +S +G T VV S ++++ D + Sbjct: 181 DFKPYSITYTLIKTVFFAYIITSISAFYGYNARGNSLEVGTASTRAVVASCVVILLFDLI 240 Query: 364 FAIFYF 369 Sbjct: 241 LTQVLL 246 >gi|110596847|ref|ZP_01385137.1| Protein of unknown function DUF140 [Chlorobium ferrooxidans DSM 13031] gi|110341534|gb|EAT59994.1| Protein of unknown function DUF140 [Chlorobium ferrooxidans DSM 13031] Length = 264 Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 60/239 (25%), Positives = 115/239 (48%) Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 + + + K + ++ Q G +P+V++ + GA++A Sbjct: 16 QLKDFFLTMQEFFLFSLRTFMAIPKTIRYWRDVLDQATICGTDSIPIVLVSAISIGALLA 75 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 + L FGA+ ++ +RE+G LL +M++ R GS AE+G+M+I+E+IDA Sbjct: 76 IEVGNLLEDFGAKTMLGRSTALSVIRELGPLLMGLMLSARFGSRNGAELGAMQISEQIDA 135 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R G D + L+ PR+ A +I LT L++F+ + A+ + Y+ I +F++ + Sbjct: 136 LRAFGTDPIAKLVMPRLVAALIMFLPLTALSDFAGLQSAAYMAEHYHRIDPGIFWNAVYP 195 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + G +KAP A I +V+ GF+ + +G+ +V S +V+I + Sbjct: 196 RLAPKDFVVGFLKAPVFAVIITLVSSFNGFSARGGTAGVGRATIKGIVVSSGLVLIANF 254 >gi|21673166|ref|NP_661231.1| hypothetical protein CT0327 [Chlorobium tepidum TLS] gi|21646245|gb|AAM71573.1| conserved hypothetical protein [Chlorobium tepidum TLS] Length = 252 Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 62/247 (25%), Positives = 119/247 (48%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + A+ K K + ++ Q + GV +P+V++ S GA+++ Sbjct: 4 FKELVLTMQEFFYFALRAFATLPKAKRYWRDVLDQAFICGVESIPIVLVSSISIGALMSM 63 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 + L +FGA+ S LRE+G LL +M++ R G+ AE+G+M+I+E+IDA+ Sbjct: 64 EVGNLLEEFGAKTMLGRSTSNAVLRELGPLLMGLMLSARYGARNGAELGAMQISEQIDAL 123 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R G D + L+ PR+ A +I L L++F+ + ++V Y+ + +F++ + Sbjct: 124 RAFGTDPIAKLVMPRLLAALIMFVPLIALSDFAGLQTGALVAQYYHKLDPGIFWNSIYPR 183 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + +KAP A I +V+ GF+ + +G+ +V S +V++ + Sbjct: 184 LLPMDFVVSFLKAPVFAIIITLVSSFNGFSARGGTAGVGRSTIKGIVASSGLVLVANFYV 243 Query: 365 AIFYFAI 371 + F I Sbjct: 244 SKLVFDI 250 >gi|284039999|ref|YP_003389929.1| hypothetical protein Slin_5158 [Spirosoma linguale DSM 74] gi|283819292|gb|ADB41130.1| protein of unknown function DUF140 [Spirosoma linguale DSM 74] Length = 243 Score = 184 bits (468), Expect = 2e-44, Method: Composition-based stats. Identities = 60/239 (25%), Positives = 109/239 (45%), Gaps = 1/239 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G G + K +L +I + +GV + +V L++ GAV Q A+ L+ Sbjct: 4 IGSYFLFLGTLFRNREKLSVYLGLIINECTSIGVGSIFIVALVNIFIGAVTCVQTAYNLT 63 Query: 192 QFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 + I L+ + E+ L+ +++AG+ GS I +E+G+M+I E++DA+ MG++ Sbjct: 64 NPFVPKYIIALIVRDSSILELAPTLSCIVLAGKVGSNIASELGTMRITEQVDALEVMGIN 123 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 LI P++ A ++ PLL I+A F AI+G I I + + + Sbjct: 124 SSSYLILPKVIASVLMFPLLVIMAAFLAILGGYIAGTLAGVISAEEYVTGLRFDYKPFGV 183 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 LIK A I ++ +G+ V + +G T+ V S ++ D + Sbjct: 184 AFALIKTVVFAFLISTISAFQGYNVSGGALEVGAASTSAVTNSCIAIVAADFVLTQLLL 242 >gi|297518302|ref|ZP_06936688.1| toluene ABC transporter, permease protein [Escherichia coli OP50] Length = 174 Score = 184 bits (468), Expect = 2e-44, Method: Composition-based stats. Identities = 54/173 (31%), Positives = 92/173 (53%), Gaps = 1/173 (0%) Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258 L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ E++ ++ M +D +R +ISP Sbjct: 1 MGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISP 60 Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKA 317 R WA +ISLPLLT++ I G S+V + I F+S + ++ LIK+ Sbjct: 61 RFWAGVISLPLLTVIFVAVGIWGGSLVGVSWKGIDSGFFWSAMQNAVDWRMDLVNCLIKS 120 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 A + +++ G+ S + + T VV S V+ +D + F Sbjct: 121 VVFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 173 >gi|326333402|ref|ZP_08199648.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] gi|325948798|gb|EGD40892.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] Length = 275 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 50/241 (20%), Positives = 105/241 (43%), Gaps = 6/241 (2%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVILISFVTGAVIAQQ 185 LG + F + ++K +L ++ ++ V V V++ ++F TGA + Sbjct: 22 LGFYLRAVSWFPRTLRRYKKEILRILAEVTLGSGALAVIGGTVGVILAMTFFTGAQVGLS 81 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 G L Q G FS + + REI L+ + +A G A++G+M+I+EE+DA+ Sbjct: 82 GYTALDQLGTSAFSGFVSAYFNTREIAPLVAGIALAATVGCGFTAQLGAMRISEEVDALE 141 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 M + + L++ R+ +I++ L ++ S+ + + +Y + F++ Sbjct: 142 VMAIPSLPFLVTTRMIGGLIAIVPLYVVGLLSSYVATRFTVILFYGQSAGTYDHYFNTFL 201 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 ++ K A + ++ G+ +G V V SI V ++D + + Sbjct: 202 PPVDVLWSFGKVLIFAVVVILIHCYHGYNASGGPAGVGVAVGKAVRTSIVAVSVLDLMLS 261 Query: 366 I 366 + Sbjct: 262 M 262 >gi|311744833|ref|ZP_07718629.1| ABC superfamily ATP binding cassette transporter membrane protein [Aeromicrobium marinum DSM 15272] gi|311311950|gb|EFQ81871.1| ABC superfamily ATP binding cassette transporter membrane protein [Aeromicrobium marinum DSM 15272] Length = 292 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 51/273 (18%), Positives = 103/273 (37%), Gaps = 1/273 (0%) Query: 94 KNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFL 153 QK R +G + ++ V + ++ + Sbjct: 8 DPQKDARPSLVQRASAAPVKLGNGLDDLGKQMLFYLRVIKSVPRTIKNYSREIFRLLAEV 67 Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 + VG V V+ + F TG + QG L Q G S + + REI Sbjct: 68 TFGSGSLALVG-GTVGVIAAMCFFTGTEVGLQGYAALDQLGTSALSGFVSAYFNTREIAP 126 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 ++ + +A G A++G+M+I+EE+DA+ M + + L++ R+ A +I++ L I+ Sbjct: 127 IVAGIALAATVGCGFTAQLGAMRISEEVDALEVMAIPSLPFLVTTRVIAGLIAVIPLYIV 186 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 S+ + + + Y + F + ++ K A + ++ G+ Sbjct: 187 GLLSSYFATRLTVTQVYGQSSGTYDHYFTTFLPPGDVLWSFAKVLIFAVVVILIHCYYGY 246 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 +G V V SI + ++D L ++ Sbjct: 247 YASGGPAGVGVAVGLAVRTSIVAINVVDLLASM 279 >gi|78188458|ref|YP_378796.1| putative ABC transport system permease protein [Chlorobium chlorochromatii CaD3] gi|78170657|gb|ABB27753.1| putative ABC transport system permease protein [Chlorobium chlorochromatii CaD3] Length = 264 Score = 183 bits (466), Expect = 3e-44, Method: Composition-based stats. Identities = 64/251 (25%), Positives = 118/251 (47%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I K + + + + K + + Q G +P+V++ S Sbjct: 9 SINKLSAQAKEFFFTMQEFFLFSLRAFMAIPKMGRYWRDVFDQATICGTDSIPIVLVSSI 68 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 GA++A + L FGA+ ++ +RE+G LL +M++ R GS AE+G+M+ Sbjct: 69 SIGALLAVEVGNLLEDFGAKTMLGRSTALSVIRELGPLLMGLMLSARFGSRNGAELGAMQ 128 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 I+E+IDA+R G D V L+ PR+ A ++ LT L++F+ + A+ + Y+ I + Sbjct: 129 ISEQIDALRAFGTDPVAKLVMPRLVAALVMFLPLTALSDFAGLQSAAYMAEHYHHIDAGI 188 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 F++ + L + G +KAP A I +V+ GF + +G+ +V S + Sbjct: 189 FWNAVYPRLVLKDFVLGFLKAPVFAVIITLVSSFNGFNARGGTAGVGRATIKGIVVSSGL 248 Query: 357 VIIIDSLFAIF 367 V+I + + Sbjct: 249 VLIANFYVSKL 259 >gi|189502390|ref|YP_001958107.1| hypothetical protein Aasi_1030 [Candidatus Amoebophilus asiaticus 5a2] gi|189497831|gb|ACE06378.1| hypothetical protein Aasi_1030 [Candidatus Amoebophilus asiaticus 5a2] Length = 229 Score = 183 bits (466), Expect = 3e-44, Method: Composition-based stats. Identities = 53/222 (23%), Positives = 99/222 (44%), Gaps = 1/222 (0%) Query: 149 FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF-SIDLMSILQ 207 +K + I + +G+ + +V ++S GAV Q ++ L A+ F + + Sbjct: 8 WKTYFQQTIDECINIGICSITIVSIVSIFIGAVTCIQISYNLKSPFAQDFLVGFGVRNMV 67 Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267 + E+ + A++ AG+ GS I +++GSM+I E+IDA+ MG++ L+ P+I A I Sbjct: 68 ILELAPTVMAIIFAGKVGSNIASQLGSMRITEQIDALEVMGINPTTYLVLPKIIASIFMY 127 Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327 PLL IL+ AI + + + I + K+ A + + Sbjct: 128 PLLVILSGSLAIYSGYLAAKFVLTMAAEDYIYGIRFMFEPYTIQFAIYKSIAFAFLVSSI 187 Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 A +GF V + ++G+ T V S ++ D + Sbjct: 188 ASYKGFYVFRGAVAVGQASTEAVTNSCIAILAADYVLTQLLL 229 >gi|167753066|ref|ZP_02425193.1| hypothetical protein ALIPUT_01336 [Alistipes putredinis DSM 17216] gi|167659380|gb|EDS03510.1| hypothetical protein ALIPUT_01336 [Alistipes putredinis DSM 17216] Length = 247 Score = 183 bits (466), Expect = 3e-44, Method: Composition-based stats. Identities = 57/246 (23%), Positives = 105/246 (42%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 ++G G+ + K + +I +M +G++ + + +IS GAVI Sbjct: 1 MLKIFELIGRYFILMGKVFSRPEKRAIYRRRIIYEMESLGLNSIGLTAIISVFIGAVITL 60 Query: 185 QGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + L + + E + A+++AG+ GS+I +EIG+M+I E+IDA Sbjct: 61 QMSINLESPFIPKYIIGYATRETMILEFSSTVVALILAGKVGSSIASEIGTMRITEQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I A ++ P L IL+ I G ++ + + Sbjct: 121 LEIMGVNSASYLILPKIVATVLFFPFLAILSILIGIAGGYLISALTGIMIPDDYVQGLLY 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +I LIK A I ++ G+ +S +G T VV S +++I + + Sbjct: 181 DFRPYSITYTLIKMAVFAFIITSISAFYGYYAKGNSLEVGAASTKAVVASSIVIMIFNLI 240 Query: 364 FAIFYF 369 Sbjct: 241 LTQILL 246 >gi|189423561|ref|YP_001950738.1| hypothetical protein Glov_0490 [Geobacter lovleyi SZ] gi|189419820|gb|ACD94218.1| protein of unknown function DUF140 [Geobacter lovleyi SZ] Length = 257 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 63/228 (27%), Positives = 118/228 (51%), Gaps = 1/228 (0%) Query: 141 EFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSI 200 + + + Q +G S + + +L TG V+A Q QL F A + Sbjct: 27 QAFVRIFHKPYYYRDFAIQFDKLGFSSLFICVLTGLFTGMVMALQALIQLKPFAATSYVG 86 Query: 201 DLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRI 260 ++++ ++E+G +L A+M+AGR GSAI AE+G+M + E++DA+R G D ++ L++PR+ Sbjct: 87 GMVAVTMIKELGPVLAALMVAGRVGSAITAELGTMVVTEQVDAMRVEGTDIIQRLVTPRL 146 Query: 261 WALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320 A++++LPLLTI+ + +++G ++ Y I ++ S F + G+ K Sbjct: 147 KAMLLALPLLTIITDAVSMLGGYLIASG-YSISPVMYLSTFTQFMVPLDYLEGVTKPLVF 205 Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 A I +++ + G G + +G VV S +V++ D A + Sbjct: 206 AFLITMISCQTGLNTGGGAEGVGAAAKRAVVLSSVLVLMCDFFIAKIF 253 >gi|300789441|ref|YP_003769732.1| ABC transporter permease [Amycolatopsis mediterranei U32] gi|299798955|gb|ADJ49330.1| ABC transport system permease protein [Amycolatopsis mediterranei U32] Length = 264 Score = 183 bits (465), Expect = 4e-44, Method: Composition-based stats. Identities = 58/252 (23%), Positives = 109/252 (43%), Gaps = 4/252 (1%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 K N + + + Y+ + F+L Q +++ + IL+S G Sbjct: 11 KAANGLREFGRMCAMGLDVLLAMLRRPYQVREFVL----QFWFIASVSITPAILVSIPFG 66 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 AVI+ Q SQ GA+ F+ + +++ ++T ++IAG GSAI A++G+ I E Sbjct: 67 AVISLQLGSLTSQIGAQQFNGAASVLAVVQQASPIVTTLIIAGAGGSAICADLGARSIRE 126 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EI A+ +G+ + L+ PR+ A + LL L + ++G + + Sbjct: 127 EIAAMEVLGVSPIHRLVVPRVQAAVGVSVLLNGLVSVVGVLGGYFFGVIIQGGTPGAYLA 186 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 F++ A L ++ IKA G+VA G +G V VV + ++ Sbjct: 187 SFNALAQLPDLVVSSIKAVIFGYLAGVVAAYRGLNPKGGPKGVGDVVNQSVVITFLLLFF 246 Query: 360 IDSLFAIFYFAI 371 ++++ Y + Sbjct: 247 VNTVLTALYLQL 258 >gi|119714948|ref|YP_921913.1| hypothetical protein Noca_0701 [Nocardioides sp. JS614] gi|119535609|gb|ABL80226.1| protein of unknown function DUF140 [Nocardioides sp. JS614] Length = 261 Score = 183 bits (465), Expect = 4e-44, Method: Composition-based stats. Identities = 56/252 (22%), Positives = 115/252 (45%), Gaps = 4/252 (1%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + + + + ++ + F I+Q +++ + L++ G Sbjct: 8 RALAPVGTAGKFFAFGLDVMRALFKRPFQLREF----IQQAWFIASVTIIPTALVAIPFG 63 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 AVIA Q + QFGA+ F+ + +++ + TA++IAG GSAI A++G+ KI E Sbjct: 64 AVIALQVGGLIKQFGAQSFTGSASVLAVVQQAAPIGTALLIAGAGGSAIAADLGARKIRE 123 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DA+ +G+D ++ L+ PR+ A ++ L L + + G + D + + Sbjct: 124 ELDAMMVLGIDPIQRLVVPRVLAAMLVAVFLNGLVSVVGVAGGYVFNVILQDGTPGAYLA 183 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 F + + L +++ G+ KA +VA +G +G V VV + ++ I Sbjct: 184 SFTALSQLPDLWQGMAKALVFGLIAAVVACYKGMNAAGGPKGVGDAVNESVVVTFILLFI 243 Query: 360 IDSLFAIFYFAI 371 ++ + + Y + Sbjct: 244 VNFVMSAIYIQL 255 >gi|313677561|ref|YP_004055557.1| hypothetical protein Ftrac_3477 [Marivirga tractuosa DSM 4126] gi|312944259|gb|ADR23449.1| protein of unknown function DUF140 [Marivirga tractuosa DSM 4126] Length = 243 Score = 183 bits (465), Expect = 4e-44, Method: Composition-based stats. Identities = 58/243 (23%), Positives = 108/243 (44%), Gaps = 1/243 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G G F + I + +G + + +V + S GAV Q A+ Sbjct: 1 MKSIGAYFIFLGSMFVRRESFSSYFKLTINECISIGWNSILIVAITSTFMGAVTTVQTAY 60 Query: 189 QLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L + + + ++ + + E+ +TA++IAG+ GS+I +G+M+I E+IDA+ M Sbjct: 61 NLVSPLIQNYVVAQVTREMVVLELAPTITAIVIAGKVGSSIAGGLGTMRITEQIDALEVM 120 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ L+ P+I A +I PLL ++A F A+ G I + + Sbjct: 121 GVNASSYLVLPKIVAAMIMYPLLVVIAGFLALYGGYIAGTLTGILTETEYVYGIRIDFNP 180 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + LIK+ A I ++ +GF + +G+ T+ V +S V++ D + A Sbjct: 181 FTVQFALIKSLVFAFLIASISAFQGFFTTGGALEVGQSSTSAVTKSCIAVLLADYILAEL 240 Query: 368 YFA 370 Sbjct: 241 LLN 243 >gi|194334499|ref|YP_002016359.1| hypothetical protein Paes_1694 [Prosthecochloris aestuarii DSM 271] gi|194312317|gb|ACF46712.1| protein of unknown function DUF140 [Prosthecochloris aestuarii DSM 271] Length = 264 Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats. Identities = 63/240 (26%), Positives = 115/240 (47%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + + + K + + + Q G +P+V++ S GA++ Sbjct: 15 QSMKEFFLTMQEFFFFSVRAFVTLPKLRRYWRDFLDQATIAGTDSIPIVLVSSISIGALL 74 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A + L FGA+ ++ +RE+G LL +M++ R GS AE+G+MKI+E+ID Sbjct: 75 AVEVGNLLEDFGAKTMLGRSTALSVIRELGPLLMGLMLSARYGSRNGAELGAMKISEQID 134 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R G D V L+ PR+ A +I LT +A+F+ + A+ + Y+ I +F++ Sbjct: 135 ALRAFGTDPVAKLVMPRLAAALIVFIPLTAIADFAGLHSAAWLAEHYHKIDPGIFWNAVF 194 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L + G +KAP A I +V+ GF+ + +G+ +V S +++I + Sbjct: 195 PRLVLKDFVVGFLKAPVFAIIITLVSSFNGFSATGGTAGVGRSTIKGIVVSSGLILIANF 254 >gi|226227980|ref|YP_002762086.1| putative transporter [Gemmatimonas aurantiaca T-27] gi|226091171|dbj|BAH39616.1| putative transporter [Gemmatimonas aurantiaca T-27] Length = 264 Score = 183 bits (464), Expect = 5e-44, Method: Composition-based stats. Identities = 68/244 (27%), Positives = 112/244 (45%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + H G + ++ IRQM +GV VP+ ++++ G V A Sbjct: 15 TAGLLHAFGRRAYFARDIARGLRDPGTWIPETIRQMQRIGVESVPLTVIVAAFLGGVTAF 74 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q +QL + + E+G LLTA+++ GR G+ + AEIG+M++ E+IDA+ Sbjct: 75 QTRYQLFPGVQLSVVGLIARQSIVLELGPLLTALVLTGRVGARMTAEIGTMRVTEQIDAL 134 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 T+ D V L +PR A ++ LP L +LAN +AI A + D+ + F Sbjct: 135 ETLAFDPVAYLATPRFIAGVVMLPTLVMLANATAIFSAWATLVLATDVRTSDFLGGLRLA 194 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 T + LIKA AI V EG+ + +GK VV + ++++D++ Sbjct: 195 FTAFQVVYSLIKATCFGAAIAFVCSYEGYVTEAGAEGVGKSTALAVVIASVSILVLDAIV 254 Query: 365 AIFY 368 A Sbjct: 255 AAVL 258 >gi|54027028|ref|YP_121270.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54018536|dbj|BAD59906.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 284 Score = 183 bits (464), Expect = 5e-44, Method: Composition-based stats. Identities = 57/234 (24%), Positives = 98/234 (41%) Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 E + + IRQ ++ + ++ V++ Q ++Q GA Sbjct: 45 AVIELFRALAARRFPYHEFIRQCAFMSNVSAAPTVFVAIPIAVVVSIQVGALVNQVGATT 104 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 F + + +R+ L+T++MIAG GSAI A++GS I EEIDA+ MG++ VR L++ Sbjct: 105 FIGAVAGLGIIRQGAPLVTSLMIAGAVGSAICADLGSRTIREEIDAMMVMGVNPVRRLVA 164 Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 PR+ A ++ LL F A + F F S A +++ L+KA Sbjct: 165 PRLVAAVLVSMLLCGFIVFVGFATAYMFNVYAQSGTPGSFIGSFASFAVASDLIVALVKA 224 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 I+A G + V + VV S ++ + + Y + Sbjct: 225 AIFGALTAIIACDIGLHAKGGPGGVANAVNSAVVTSALMLFATNIILTQLYNTL 278 >gi|255534289|ref|YP_003094660.1| ABC-type transport system involved in resistance to organic solvents, permease component [Flavobacteriaceae bacterium 3519-10] gi|255340485|gb|ACU06598.1| ABC-type transport system involved in resistance to organic solvents, permease component [Flavobacteriaceae bacterium 3519-10] Length = 250 Score = 183 bits (464), Expect = 5e-44, Method: Composition-based stats. Identities = 59/249 (23%), Positives = 103/249 (41%), Gaps = 3/249 (1%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + +G + K F +R+++ +GV+ +V+ S GAV+A Sbjct: 2 FKNLLSQIGAYFLLLSKTMKRPQKSSVFGKLFMREIHDLGVNSFGLVLFTSTFVGAVVAI 61 Query: 185 QGAFQLSQ---FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 Q S F ++ + E + +V++AG+ GS I + IG+M++ E+I Sbjct: 62 QMFNNFSASSFPIPNSFIGYATKVVLILEFAPTIISVILAGKVGSYIASSIGTMRVTEQI 121 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ MG++ LI P+I A II PLL ++ I G + A + + Sbjct: 122 DALDIMGVNSPNFLILPKILASIIFNPLLIAISIVFGIWGGYLAGIATGSWSKADYITGI 181 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 I+ K A I V G+ V S +G+ T VV +I +II + Sbjct: 182 QMYMPQHFIWYAFFKTAVFAFLIATVPAYFGYNVKGGSLEVGRASTQAVVWTIVAIIITN 241 Query: 362 SLFAIFYFA 370 + + + Sbjct: 242 LILTQMFLS 250 >gi|118619254|ref|YP_907586.1| membrane protein YrbE4A [Mycobacterium ulcerans Agy99] gi|118571364|gb|ABL06115.1| conserved membrane protein YrbE4A [Mycobacterium ulcerans Agy99] Length = 279 Score = 183 bits (464), Expect = 5e-44, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 102/256 (39%), Gaps = 1/256 (0%) Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171 +G+ + I A +G + + ++++ + Q + V + Sbjct: 18 RRLGRGT-ELIQQLAVPARAVGGFFEMSIDTARAAFRRPFQFREFLDQTWMVARVSLVPT 76 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 +L+S ++A L + GA S + + ++G ++T +++AG +AI A+ Sbjct: 77 LLVSIPFTVLVAFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICAD 136 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 +G+ I EEIDA+R +G+D ++ L+ PR+ A + LL L + G Sbjct: 137 LGARTIREEIDAMRVLGIDPIQRLVVPRVLASTVVALLLNGLVCAIGLSGGYAFSVFLQG 196 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 + F + L + IKA G+V G V +G V VV Sbjct: 197 VNPGAFINGLTVLTGLRELILAEIKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVV 256 Query: 352 QSISIVIIIDSLFAIF 367 + + +I+ + Sbjct: 257 YAFICLFVINVVMTAI 272 >gi|149921452|ref|ZP_01909904.1| ABC-type transport system involved in resistance to organic solvents [Plesiocystis pacifica SIR-1] gi|149817655|gb|EDM77122.1| ABC-type transport system involved in resistance to organic solvents [Plesiocystis pacifica SIR-1] Length = 259 Score = 182 bits (463), Expect = 6e-44, Method: Composition-based stats. Identities = 49/241 (20%), Positives = 104/241 (43%), Gaps = 2/241 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 L + G + I Q G + ++ +++ G ++ Q Sbjct: 19 LVDFVRFVGLALRVQFTRVPPRDVFITQFVDAGWGSLALLTMLTAFAGLNLSVQSYASFE 78 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 +FG + + +RE+ ++ AV+ R G+ + A + +M+I+E+I+A+ M +D Sbjct: 79 RFGGQDLLGMFAGVGGVRELYPVMAAVVCGARIGANLAASLANMRISEQIEALEVMAVDP 138 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 + LISPR+WA+ ++LPLL A+ I + D+ F ++ L +I Sbjct: 139 LDYLISPRLWAVTLALPLLCGYADVVGIAASYAGAVYQLDLDAGSFMTQIQEQVGLVDIG 198 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGV--HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 G++K M + ++A G++V ++ +G +V I+++ + + Sbjct: 199 AGMLKGLIMGWLVAVIACFHGYSVSKRDGADGVGISTNLAIVHGAVTCIVVNLFLSWLIY 258 Query: 370 A 370 Sbjct: 259 G 259 >gi|262201121|ref|YP_003272329.1| hypothetical protein Gbro_1128 [Gordonia bronchialis DSM 43247] gi|262084468|gb|ACY20436.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247] Length = 268 Score = 182 bits (463), Expect = 7e-44, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 114/256 (44%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + G ++ + ++ I+Q +++ + LI+ Sbjct: 7 RGVDRIAKAGTGALEQTGNIVQLFVDVARQTFVRPFQWREFIQQAWFIASVTILPTALIA 66 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 GA+++ Q + Q GAE ++ ++ +++ L+T+++IAG +GSA+ A++GS Sbjct: 67 IPFGAIVSLQTGSLIKQLGAESYTGAASVLVVIQQGSPLVTSLLIAGAAGSAVAADLGSR 126 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 I EEIDA+ +G++ ++ L+ PR+ A+++ LL L I G Sbjct: 127 TIREEIDAMEVLGINPIQRLVVPRVLAMVLVAMLLNGLVAVIGIGGGYFFNVVVQGGTPG 186 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + + F + A L +++ +KA G+VA +G +G V VV + Sbjct: 187 AYLASFGALAQLPDLYVSTLKAAIFGVLAGVVAAYKGLHPKGGPKGVGDAVNQSVVITFL 246 Query: 356 IVIIIDSLFAIFYFAI 371 ++ + + + Y I Sbjct: 247 LLFLANLIITAVYLQI 262 >gi|110638590|ref|YP_678799.1| ABC transporter permease [Cytophaga hutchinsonii ATCC 33406] gi|110281271|gb|ABG59457.1| ABC transporter, permease [Cytophaga hutchinsonii ATCC 33406] Length = 243 Score = 182 bits (463), Expect = 7e-44, Method: Composition-based stats. Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 1/230 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 G + G KF + I + +G + + +V ++S GAV Q A Sbjct: 1 MKSFGKYMILMGSLFVRREKFSVYWKLTIDECILIGTNSIFIVAIVSSFIGAVTCIQTAA 60 Query: 189 QLSQFGAEIFSIDLMSILQ-LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L I+ + + + E+ T V++AG+ GS+I ++G+M+I E++DA+ M Sbjct: 61 NLVSPLVPIYVVASVVREMSILELAPTFTCVVLAGKVGSSIAGQLGTMRITEQVDALEVM 120 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ LI P+I A +I++P+L A +I+G I I F Sbjct: 121 GINSASYLILPKILASLITIPMLVTFAGLLSILGGYIAGILGNIITTQDFVYGVQIDFNE 180 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 N+ LIKA A I ++ +G+ + +G+ TT VV S V Sbjct: 181 FNVTFALIKAFVFAFLISSISAYQGYFTKGGALEVGQSSTTAVVNSCIGV 230 >gi|229494293|ref|ZP_04388056.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] gi|229318655|gb|EEN84513.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] Length = 281 Score = 182 bits (462), Expect = 7e-44, Method: Composition-based stats. Identities = 55/265 (20%), Positives = 115/265 (43%), Gaps = 9/265 (3%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVS 166 + + V ++ Q VI++ ++ + L+ Q+ + G Sbjct: 11 RVSSRTVDGLSRLGDQFTFHARVITSIPATLKRYWR---EVARLVAQVAFGSGTLLAGGG 67 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 V V+ ISF G+ I +G L+ G S + +I RE+ L+ A+ +A + G+ Sbjct: 68 SVVVIFAISFFAGSQIGLEGYRGLNLVGLAPLSGVMSAIANTREVAPLVAAITLAAKVGT 127 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A++G+M+I+EEIDA+ M + +R L++ R+ A +I++ L ++ F++ + ++ + Sbjct: 128 GFTAQLGAMRISEEIDALEVMAIPSLRYLVTTRMIAALIAVVPLYLVGLFASYMATALAV 187 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + + F + +I+ LIK A + +V G+ +G+ Sbjct: 188 IRVKGQSEGTYGYYFSLFLSPNDIWLSLIKVMVFAVVVTLVHCYYGYTATGGPEGVGRAA 247 Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371 + SI + D I + + Sbjct: 248 GRALRTSIVFLAFTDVAMTIALWGL 272 >gi|134098920|ref|YP_001104581.1| putative ABC-transporter integral membrane protein [Saccharopolyspora erythraea NRRL 2338] gi|133911543|emb|CAM01656.1| putative ABC-transporter integral membrane protein [Saccharopolyspora erythraea NRRL 2338] Length = 243 Score = 182 bits (462), Expect = 8e-44, Method: Composition-based stats. Identities = 59/241 (24%), Positives = 112/241 (46%), Gaps = 4/241 (1%) Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190 + L + ++F+ F ++Q +++ + IL+S GAVI+ Q Sbjct: 1 MFALGLDVAVLMFRRPFQFREF----VQQFWFIASVSITPAILVSIPFGAVISLQLGTLT 56 Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 +Q GA+ F+ + +++ ++T ++IAG GSAI A++GS I EEI A+ +G+ Sbjct: 57 AQIGAKSFNGAASVLAVVQQASPIVTTLVIAGAGGSAICADLGSRTIREEIAAMEVLGVS 116 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 V+ LI PR+ A +++ LL L + + G D + + F++ A L ++ Sbjct: 117 PVQRLIVPRVLAAVLTAMLLNGLVSVVGVAGGYFFNVIVQDGTPGAYLASFNALAQLPDL 176 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + KA G+VA G S +G V VV + ++ ++++ Y Sbjct: 177 WVSTFKALIFGFLAGVVAAYRGLNPRGGSKGVGDVVNQSVVITFLLLFFVNTVITALYLQ 236 Query: 371 I 371 + Sbjct: 237 L 237 >gi|315635512|ref|ZP_07890778.1| ABC superfamily ATP binding cassette transporter, permease protein [Arcobacter butzleri JV22] gi|315480270|gb|EFU70937.1| ABC superfamily ATP binding cassette transporter, permease protein [Arcobacter butzleri JV22] Length = 285 Score = 181 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 74/266 (27%), Positives = 126/266 (47%), Gaps = 12/266 (4%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 W + I + + ++ +D + + D+ ++ F+ + K Sbjct: 18 LTLLNIWDKQTLPNIIKKIE--LLNFSKNSKLSIDFANLKGCDSSAIIYLISFLNTFEEK 75 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + + E++F ++ K+ ++ + FF +GKK +S Sbjct: 76 NITILNNKNHEKIFDFYKKHYQTKLLEEEKKNLFF--------EDLGKKSYDIYKESKEF 127 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G V + K + ++++ + + +V + SF+ G VIA QG+ Sbjct: 128 IGFIGKVFYFFIYAIFNPSKIR--FKAMLKYIETSAFDALLIVAVTSFLVGVVIAYQGSV 185 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 QL +FGA IF ++++SI REI L+TA++IAGRS S+ AEIG+MKI EEIDA++TM Sbjct: 186 QLEKFGANIFIVEMISITMFREIAPLVTAIVIAGRSASSYTAEIGAMKITEEIDAMKTMN 245 Query: 249 LDFVRILISPRIWALIISLPLLTILA 274 + L PRI+AL ISLPLL Sbjct: 246 FEPTLFLTLPRIFALCISLPLLVFFC 271 >gi|302338250|ref|YP_003803456.1| protein of unknown function DUF140 [Spirochaeta smaragdinae DSM 11293] gi|301635435|gb|ADK80862.1| protein of unknown function DUF140 [Spirochaeta smaragdinae DSM 11293] Length = 258 Score = 181 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 69/260 (26%), Positives = 121/260 (46%), Gaps = 3/260 (1%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + +G +++ I + I + F + + L+ Q+ + GV + Sbjct: 1 MFQELGHRVIASIRELFYACGFFLRTIKESVPFFR---RRQIGYRVLVMQLLFTGVEALG 57 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V+ LI+ + G VI G L QFG ++ + +RE+G LL A +I RSG+AI Sbjct: 58 VISLIALILGGVIIVYGVDLLPQFGQGELIYSILITVIMRELGPLLCAFIIIARSGTAIA 117 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 E+G M ++ +I+A ++G+D + L+ PR +I S+ LL I N +I + V Sbjct: 118 TELGQMVVSHQIEAYTSVGVDPISYLVVPRFLGVIFSMILLNIYFNLFGLIASFFVTSFI 177 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 IP + + +I + +IK+ I + A GF V S + + V Sbjct: 178 QPIPMRDYMYDLITHIRSVDIVSSMIKSLIFGAIIALSATYNGFRVEQSSTEVPQVVIKA 237 Query: 350 VVQSISIVIIIDSLFAIFYF 369 VVQS ++I+ D+L + Y+ Sbjct: 238 VVQSFVLIIVADALITLIYY 257 >gi|296089608|emb|CBI39427.3| unnamed protein product [Vitis vinifera] Length = 329 Score = 181 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 91/236 (38%), Gaps = 23/236 (9%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 V G+ K ++ ++Q+ VG V V IL + G Q + ++ G Sbjct: 107 VFIMAGQVIIRILTGKVHWVNTLQQLERVGPRSVGVCILTAAFVGMAFTIQFVREFTRLG 166 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 ++++ RE+ + +E+ D +R +G + V Sbjct: 167 LNRSVGGVLALAFSRELSPV-----------------------SEQTDTLRVLGTNPVDY 203 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L++PR+ A I+LP LT+L + ++++ Y I + +I + + Sbjct: 204 LVTPRVIASCIALPFLTLLCFTVGMASSALLADSVYGISINIILDSAQRALNSWDIISAM 263 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 IK+ I V+ G + +G+ T+ VV S+ + I D + +F Sbjct: 264 IKSVAFGGIISTVSCAWGVTTMGGAKGVGESTTSAVVISLVGIFIADFALSYCFFQ 319 >gi|145352678|ref|XP_001420665.1| ABC(membrane) family transporter: toluene tolerance [Ostreococcus lucimarinus CCE9901] gi|144580900|gb|ABO98958.1| ABC(membrane) family transporter: toluene tolerance [Ostreococcus lucimarinus CCE9901] Length = 308 Score = 181 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 117/251 (46%), Gaps = 5/251 (1%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 KF+ S + + G V+ + ++Q+ VG + V +L S G Sbjct: 62 KFLWRSAATGLLFGSVLYRCAR-----QPRRVNWEQTLQQIARVGPQTLGVSLLTSSFVG 116 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V Q + ++ G + L+ + RE+ ++ A+++ GR GS+I AE+G+M++ E Sbjct: 117 MVFTIQFCKEFAKVGLKNAIGGLLGLAFARELTPVICAIVLTGRIGSSIAAELGTMQVTE 176 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++D + +G D V L+ PR+ A +SLP+L+I++ A+ + ++ Y + V Sbjct: 177 QVDQLTVLGTDPVDYLVIPRVIACAVSLPILSIISFAQALGASILLADLRYGVSPNVIID 236 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 ++I K+ I +++ G + +G+ T VV S++ + + Sbjct: 237 SAAKYLEPSDIGIMTAKSIAFGAVIAVISCGWGTTTTGGAKGVGESTTASVVISLTAIFV 296 Query: 360 IDSLFAIFYFA 370 +D + ++ +F Sbjct: 297 VDFVLSLVFFQ 307 >gi|146328846|ref|YP_001209755.1| hypothetical protein DNO_0858 [Dichelobacter nodosus VCS1703A] gi|146232316|gb|ABQ13294.1| conserved hypothetical membrane protein [Dichelobacter nodosus VCS1703A] Length = 262 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 68/249 (27%), Positives = 126/249 (50%), Gaps = 2/249 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +Q L T + + I+ +++ GV +P++++ G V+A Sbjct: 14 VLTQLAALAEFSFLTLQLHWQLSILWRRPMLWIKALFHAGVLSLPIIMVSGLFVGMVLAL 73 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q +S FGAE + L+++ +RE+G ++TA++ AGR+GSAI AEIG MK E++DA+ Sbjct: 74 QAFINMSLFGAEQSTSTLVALSLMRELGSVVTALLFAGRAGSAITAEIGLMKTTEQLDAM 133 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG++ + + PR + +++LPLL I+ +A++GA V + + +F+S+ Sbjct: 134 TMMGVEPLAQIGVPRFFGALLALPLLAIIFVATAMVGAYWVAVPHLGLDNGIFWSQLQRG 193 Query: 305 ATL-ANIFTGL-IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 NI G+ +K+ +++ +GF + + + T VV S V+ +D Sbjct: 194 VGFYQNIVLGIGVKSLVFGWLCAAISVFQGFVCVPTAQGMAQATTKTVVLSSLAVLAVDF 253 Query: 363 LFAIFYFAI 371 L FA+ Sbjct: 254 LLTSLMFAL 262 >gi|226304167|ref|YP_002764125.1| YrbE family protein [Rhodococcus erythropolis PR4] gi|226183282|dbj|BAH31386.1| putative YrbE family protein [Rhodococcus erythropolis PR4] Length = 281 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 114/261 (43%), Gaps = 9/261 (3%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPV 170 + V ++ Q VI++ ++ + L+ Q+ + G V V Sbjct: 15 RTVDGLSRLGDQFTFHARVITSIPATLKRYWR---EVARLVAQVAFGSGTLLAGGGSVVV 71 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 + ISF G+ I +G L+ G S + +I RE+ L+ A+ +A + G+ A Sbjct: 72 IFAISFFAGSQIGLEGYRGLNLVGLAPLSGVMSAIANTREVAPLVAAITLAAKVGTGFTA 131 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 ++G+M+I+EEIDA+ M + +R L++ R+ A +I++ L ++ F++ + ++ + + Sbjct: 132 QLGAMRISEEIDALEVMAIPSLRYLVTTRMIAALIAVVPLYLVGLFASYMATALAVIRVK 191 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 + F + +I+ LIK A + +V G+ +G+ + Sbjct: 192 GQSEGTYGYYFSLFLSPNDIWLSLIKVMVFAVVVTLVHCYYGYTATGGPEGVGRAAGRAL 251 Query: 351 VQSISIVIIIDSLFAIFYFAI 371 SI + D I + + Sbjct: 252 RTSIVFLAFTDVAMTIALWGL 272 >gi|326382983|ref|ZP_08204672.1| hypothetical protein SCNU_08601 [Gordonia neofelifaecis NRRL B-59395] gi|326198119|gb|EGD55304.1| hypothetical protein SCNU_08601 [Gordonia neofelifaecis NRRL B-59395] Length = 268 Score = 181 bits (460), Expect = 2e-43, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 112/256 (43%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + K G ++ + + I+Q +++ + LI+ Sbjct: 7 RGVDKLAKAGEGALAQTGNIVQLFVDVARQLFVRPFQWREFIQQAWFIASVTILPTALIA 66 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 GA+++ Q + Q GAE ++ ++ +++ L+T++++AG +GSA+ A++GS Sbjct: 67 IPFGAIVSLQTGSLIKQLGAESYTGAASVLVVVQQGSPLVTSLLVAGAAGSAVAADLGSR 126 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 I EEIDA+ +G++ V+ L+ PR+ A+++ LL L I G Sbjct: 127 TIREEIDAMEVLGINPVQRLVVPRVLAMVLVAVLLNGLVAVVGIGGGYFFNVVVQGGTPG 186 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + + F + A L +++ +KA G+VA +G +G V VV + Sbjct: 187 AYLASFGALAQLPDLYISTLKAVIFGVIAGVVAAYKGLNPKGGPKGVGDAVNQSVVVTFL 246 Query: 356 IVIIIDSLFAIFYFAI 371 ++ + + + I Sbjct: 247 LLFFANLIITAVFLQI 262 >gi|300782533|ref|YP_003762824.1| ABC transporter permease [Amycolatopsis mediterranei U32] gi|41581797|gb|AAS07741.1| putative ABC-transporter integral membrane protein [Amycolatopsis mediterranei S699] gi|299792047|gb|ADJ42422.1| ABC transport system permease protein [Amycolatopsis mediterranei U32] Length = 250 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 54/244 (22%), Positives = 109/244 (44%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 G + + + ++ L I+Q +++ + L++ GAVI+ Q Sbjct: 1 MLRETGNLFALGLDIVRGLFQRPFQLREFIQQSWFIASVTILPTALVAIPFGAVISLQFG 60 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 Q GA+ ++ + +++ L+TA+++AG GSA+ A+IG+ I EEI A+ + Sbjct: 61 SLARQLGAQSYTGAGSVLATVQQASPLVTALLVAGAGGSAVCADIGARTIREEIAAMEVL 120 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ V+ LI PR A+++ LL + + ++G + + F + A L Sbjct: 121 GVSAVQRLIVPRTLAMMLVALLLNGMVSVIGVLGGYFFNVVLQGGTPGAYLASFSALAQL 180 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 +++ G +KA +VA G +G V VV + ++ +++ + + Sbjct: 181 PDLWVGELKALIFGFIAAVVASYRGLNPSGGPKGVGDAVNQSVVITFLLLFVVNFVITLI 240 Query: 368 YFAI 371 Y I Sbjct: 241 YLQI 244 >gi|269128028|ref|YP_003301398.1| hypothetical protein Tcur_3829 [Thermomonospora curvata DSM 43183] gi|268312986|gb|ACY99360.1| protein of unknown function DUF140 [Thermomonospora curvata DSM 43183] Length = 288 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 62/257 (24%), Positives = 119/257 (46%), Gaps = 6/257 (2%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVPVVILIS 175 ++ + LG V+ + K+ LL I + +G + VV ++ Sbjct: 25 LSTALDMPVFLGRVLYHLVVDIVLRRKYGKMLLRQISDITVGVGALVIGGGMIFVVATMA 84 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 TGA++ QG L + GAE FS + S +RE+ ++ V + + GSA AEIG+M Sbjct: 85 MATGAMVGMQGYPSLERIGAEAFSGVMASFANVREVTPIIAGVALIAQVGSAFTAEIGAM 144 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 +I+EEIDA+ MG++ + L+ R+ A +I+L L +LA F++ ++ +Y+ + Sbjct: 145 RISEEIDALEVMGINSLTFLVCTRVAAGVIALLPLYLLALFASFFATRLITVQYFGLSPG 204 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 ++ F+ ++ IK A + + G+ +G + +S Sbjct: 205 IYDYYFNLYLPPIDVLYSGIKVAVFAFVVMFIHCYRGYYATGGPVGVGVAAGRAIRESSV 264 Query: 356 IVIIIDSLFAIFYFAIG 372 +I+I+ L + ++ G Sbjct: 265 AIIVINLLLSYIFWGHG 281 >gi|317508868|ref|ZP_07966507.1| hypothetical protein HMPREF9336_02879 [Segniliparus rugosus ATCC BAA-974] gi|316252829|gb|EFV12260.1| hypothetical protein HMPREF9336_02879 [Segniliparus rugosus ATCC BAA-974] Length = 304 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 55/279 (19%), Positives = 112/279 (40%), Gaps = 15/279 (5%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 + + L + K +V + Q LGLV+ + + + Q+ Sbjct: 23 PPGFRTAVQLQSALRKAVVSGFVSAGHQITFLGLVLGAV------PKTIRHYRRQIGAQL 76 Query: 161 Y---------YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211 VG + +++ + GA I G L G + + + RE+ Sbjct: 77 QDVIWGNGSIIVGGGSIGMLLFMGVCIGASIGVVGFATLDLVGLGPLVGFVSAYVNTREL 136 Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271 ++TA+ A ++G I AE+G+M+I+EEIDAI G+ + +I+ R+ A +IS+ L Sbjct: 137 APMVTAIGFAAQTGCRITAEVGAMRISEEIDAIEAQGIQSIPFVITTRVIAGVISIIPLY 196 Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 ++ + + V+ + ++ F S ++ ++KA AI + + Sbjct: 197 VMTTLLGYVSCAFVVNVVHGEASGTYYHYFDSFIHPIDVVYSVVKAIVFVVAIIAIHGYQ 256 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+ +G + S+ V++ D + I + Sbjct: 257 GYYASGGPEGVGVAAGRAIRTSLITVVVADMVLTIVLWG 295 >gi|302525561|ref|ZP_07277903.1| ABC transporter integral membrane protein [Streptomyces sp. AA4] gi|302434456|gb|EFL06272.1| ABC transporter integral membrane protein [Streptomyces sp. AA4] Length = 286 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 47/260 (18%), Positives = 102/260 (39%), Gaps = 10/260 (3%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCA-SSYKFKGFLLSLIRQMYYVGVSG-------- 167 + ++ I + LG +S G A S + + R + V Sbjct: 14 RTLEIIARPGASLEGLGKQLSFYGRALAWSPRTIRRYGRETTRLLTEVCFGTGGLAVIGG 73 Query: 168 -VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + V+I ++ TG ++ QG L+Q G + + + RE+ L + ++ G Sbjct: 74 TLGVMIGMTLFTGLIVGLQGYSALNQLGTAALTGFISAYFNTREVAPLSAGLALSATVGC 133 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A++G+M+I+EEIDA+ M + + L++ R+ A + ++ L + S+ + + + Sbjct: 134 GFTAQLGAMRISEEIDALEVMAVPSMPYLVTTRVLAGVTAVIPLYAVGLLSSYLASRQIT 193 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 Y + F ++ K + + + G+ +G V Sbjct: 194 IWLYGQSAGTYDHYFTLFLPPEDVLWSFAKVIVFSVLVILSHCYYGYTASGGPAGVGIAV 253 Query: 347 TTCVVQSISIVIIIDSLFAI 366 V SI ++ ++D ++ Sbjct: 254 GRAVRTSIVLISVLDFFLSL 273 >gi|305664611|ref|YP_003860898.1| hypothetical protein FB2170_17306 [Maribacter sp. HTCC2170] gi|88708628|gb|EAR00864.1| hypothetical protein FB2170_17306 [Maribacter sp. HTCC2170] Length = 265 Score = 180 bits (458), Expect = 3e-43, Method: Composition-based stats. Identities = 51/247 (20%), Positives = 103/247 (41%), Gaps = 2/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 S + +G E K+ +++++ + + ++I ISF G V+A Sbjct: 20 SMNYLASIGSYAIMIKEVFRKPTKWSIMRSLILKEIDELIFGSLGILIFISFFIGGVVAI 79 Query: 185 QGAFQL-SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q A + S+ + + E ++++AG+ GS I + IG+M++ E+IDA Sbjct: 80 QTALNITSELIPKNLVGFATRQSIILEFAPTFCSIIMAGKVGSYITSSIGTMRVTEQIDA 139 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ + L+ P+I AL++ P + ++ + I G A F Sbjct: 140 LEVMGVNALNYLVFPKIIALLL-YPFIIAISMYVGIFGGWFAGVFGGFSTSADFVEGVQL 198 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 ++ IK A + + GF + + +GK TT V + ++II++ + Sbjct: 199 DFIPFHVTYSFIKTLVFAFILATIPSYHGFYMKGGALEVGKAATTSFVWTSVVIIILNYI 258 Query: 364 FAIFYFA 370 Sbjct: 259 LTQLLLG 265 >gi|134103292|ref|YP_001108953.1| putative ABC transport system permease protein [Saccharopolyspora erythraea NRRL 2338] gi|133915915|emb|CAM06028.1| putative ABC transport system permease protein [Saccharopolyspora erythraea NRRL 2338] Length = 269 Score = 180 bits (458), Expect = 3e-43, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 111/257 (43%), Gaps = 9/257 (3%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVP 169 ++ ++F++D Q + + ++ + L+ ++ + V V Sbjct: 3 RRPLEFLDDLGDQMSF---YLRTLAWIPKAVTRYVKETMRLLAEVSFGSGALAVIGGTVG 59 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V++ ++ TG V+ QG L+Q G F+ + + REI L+ + ++ GS Sbjct: 60 VMVGMTLFTGTVVGLQGYAALNQIGTSAFAGFVSAYFNTREIAPLVAGLALSATVGSGFT 119 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A++G+M+I++EIDA+ TMG+ + L++ R+ A +++ L +L ++ + A +V Sbjct: 120 AQLGAMRISDEIDALETMGVPSLPYLVTTRVVAGFVAVVPLYVLGLLTSYLAARLVTVHV 179 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 Y + F+ ++ K + + + G+ +G V Sbjct: 180 YGQSAGTYDHYFNLFLPPEDVLWSFGKVLVFSVVVIMTHCYYGYRASGGPAGVGVAVGRA 239 Query: 350 VVQSISIVIIIDSLFAI 366 V +I ++D ++ Sbjct: 240 VRTAIVTTALLDFFLSL 256 >gi|84684701|ref|ZP_01012601.1| membrane protein [Maritimibacter alkaliphilus HTCC2654] gi|84667036|gb|EAQ13506.1| membrane protein [Rhodobacterales bacterium HTCC2654] Length = 244 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 55/243 (22%), Positives = 104/243 (42%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +G V + L R +G +PVV L + TGA +A Q Sbjct: 1 MLRRIGSVTLFFLNAVIRFPATLRYPRELARAFLQIGWLSLPVVGLTAVFTGAALALQIY 60 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 S+ AE +++I +RE+G ++ +MIA R S+I AE+ +MK++E++DA+ T+ Sbjct: 61 AGGSRISAEAVVPQIVAIGIVRELGPVMVGLMIAARVTSSIAAELATMKVSEQVDALTTL 120 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 D + L +PR+ A ++++P+L L + + G +V + + + + Sbjct: 121 STDPMTYLTAPRVLAGLVTVPILVGLGDILGLFGGFVVATQGLGFNGPSYVTTSWNFLDP 180 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 +I L K +A G G + +G + V + +V+ + Sbjct: 181 VDIVLSLTKGAVFGGIAVTLACHAGLNAGRGAQGVGLATKSAVQAAAILVLAANVALTGL 240 Query: 368 YFA 370 +F Sbjct: 241 FFG 243 >gi|257054443|ref|YP_003132275.1| ABC-type transport system involved in resistance to organic solvents, permease component [Saccharomonospora viridis DSM 43017] gi|256584315|gb|ACU95448.1| ABC-type transport system involved in resistance to organic solvents, permease component [Saccharomonospora viridis DSM 43017] Length = 279 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 55/264 (20%), Positives = 106/264 (40%), Gaps = 10/264 (3%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCA-SSYKFKGFLLSLIRQMYYVGVSG-- 167 + + + N +LG +S A + + + ++R + V Sbjct: 1 MARLMQNVKNLANRPLRTLDMLGDQMSFYLRALAWTPRAIRRYSKEVLRLLAEVSFGSGS 60 Query: 168 -------VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 V V++ ++ TG ++ QG L G F+ L S REI L+ + + Sbjct: 61 LAVIGGTVGVMVGLTLFTGVLVGLQGFSALDSIGTSAFTGFLTSFFNTREIAPLVAGLAL 120 Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280 + GS A++G+M+I+EE+DA+ MG+ + L++ RI A I++ L I+ S+ + Sbjct: 121 SATVGSGFTAQLGAMRISEEVDALEVMGVPSLPYLVTTRIIAGFIAIIPLYIIGLLSSYL 180 Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 + V+ Y + F ++F +K + I + G+ Sbjct: 181 ASRTVVVYLYGQSAGTYDHYFDMFLPPEDVFYSFVKVLIFSVLIILTHCYYGYRATGGPA 240 Query: 341 SLGKKVTTCVVQSISIVIIIDSLF 364 +G V V SI V +++ Sbjct: 241 GVGVAVGKAVRLSIVTVAVVNFFI 264 >gi|326333403|ref|ZP_08199649.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1] gi|325948799|gb|EGD40893.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1] Length = 261 Score = 180 bits (457), Expect = 4e-43, Method: Composition-based stats. Identities = 58/239 (24%), Positives = 115/239 (48%) Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G + + + + ++ I+Q +++ + L++ GAVIA Q + Q Sbjct: 17 GSLFAFGLDVGRAVFRRPFQFREFIQQAWFIASVTIVPTALVAIPFGAVIALQVGGLVQQ 76 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 FGA+ F + +++ + TA+++AG GSAI A++G+ KI EE+DA+ +G+D + Sbjct: 77 FGAQSFVGSAAVLAVVQQAAPIATALLVAGAGGSAIAADLGARKIREELDAMMVLGIDPI 136 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 + L+ PR+ A ++ L L + ++G + + + F + A +A+++ Sbjct: 137 QRLVVPRVLAAMMIAVFLNGLVSIVGVMGGYVFNVIIQGGTPGAYLASFTALAQMADLWQ 196 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 GL KA IVA +G G +G V VV + ++ I++ + + + I Sbjct: 197 GLAKALVFGLIAAIVAAYKGMNAGGGPKGVGDAVNESVVITFLLLFIVNFVMSAIFLQI 255 >gi|324999480|ref|ZP_08120592.1| hypothetical protein PseP1_11966 [Pseudonocardia sp. P1] Length = 246 Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats. Identities = 52/242 (21%), Positives = 97/242 (40%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G + + + +K ++Q ++V + IL+ A++ Q L Sbjct: 1 MGSFFAFVADTFVAMFKRPFHWREFVQQTWFVASVSLGPAILLGIPFVALVTFQFNLILV 60 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + GA S + +IG + T +IAG S +AI A+IG+ KI EE+DA+ +G+D Sbjct: 61 EIGAIDLSGSGSGFATVTQIGPVATTFIIAGASSTAICADIGARKIREELDAMEVLGIDV 120 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A ++ LL + + G + + ++ Sbjct: 121 VHRLVVPRVLATAVNAFLLNGVMILIGLTGGYVFGVYLQGASPGQYVDSLKLLVGFPDLV 180 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 G I+A ++ G +G V VV + + I+ L +++ Sbjct: 181 HGEIRAVVFGMVGALIGCYRGMTCAAGPRGVGNAVNETVVYTFLALFPINILLTQIPYSL 240 Query: 372 GI 373 GI Sbjct: 241 GI 242 >gi|262196627|ref|YP_003267836.1| hypothetical protein Hoch_3441 [Haliangium ochraceum DSM 14365] gi|262079974|gb|ACY15943.1| protein of unknown function DUF140 [Haliangium ochraceum DSM 14365] Length = 258 Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats. Identities = 62/239 (25%), Positives = 114/239 (47%), Gaps = 7/239 (2%) Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 S +G+ + D+ A + V+ + +I QMY +GV Sbjct: 2 SPGAPLRALGRSALGLCRDTGGIAALGVEVVRAL-------VPPRIDGRMVIDQMYKMGV 54 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 +P+V L +F G ++A Q + Q GA RE+G ++ A+M +GR G Sbjct: 55 QSLPIVALAAFFAGVLMALQSGVIVRQLGATSLLGWGGGFAIFRELGPVVIALMFSGRVG 114 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 + A++G+MKI E++D +R + +D VR L++PRI A++ +L LTI+ N A+ G ++ Sbjct: 115 ANNAADLGNMKITEQLDGLRALAIDPVRYLVAPRIVAMVGALVSLTIIGNSIALQGGTVF 174 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 +D+ F F+ + ++ G+IK+ I + + G +V + +G+ Sbjct: 175 SMLLFDVEFITLFTSLVDNISPFDLLHGVIKSAVFGVFIALTSCYFGLSVRGGAVGVGR 233 >gi|302523959|ref|ZP_07276301.1| ABC transporter integral membrane protein [Streptomyces sp. AA4] gi|302432854|gb|EFL04670.1| ABC transporter integral membrane protein [Streptomyces sp. AA4] Length = 278 Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 106/261 (40%), Gaps = 15/261 (5%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG----- 167 I + ++ ++ Q G + + + + ++R + V Sbjct: 9 RIANRPLETLDTLGDQMSFYGRAL------LWTPRTLRRYTKEVLRLLAEVSFGSGSLAV 62 Query: 168 ----VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 V V++ ++ TG ++ QG L+ G F+ L + REI L+ + ++ Sbjct: 63 IGGTVGVMVGLTLFTGVLVGLQGYSALNSIGTSAFTGFLTAFFNTREIAPLVAGLALSAT 122 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 G+ A++G+M+I+EEIDA+ MG+ + L++ RI A +++ L ++ S+ + + Sbjct: 123 VGAGFTAQLGAMRISEEIDALEVMGVPSLPYLVTTRIIAGFVAVIPLYVIGLLSSYLASR 182 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 +V+ Y + F ++ IK + I + G+ +G Sbjct: 183 LVVIYIYGQSAGTYDHYFDLFLPPQDVLYSFIKVLIFSVLIILSHCYFGYRASGGPAGVG 242 Query: 344 KKVTTCVVQSISIVIIIDSLF 364 V V SI V +++ Sbjct: 243 VAVGRAVRLSIVTVSVVNFFI 263 >gi|271964524|ref|YP_003338720.1| resistance to organic solvents ABC transporter permease [Streptosporangium roseum DSM 43021] gi|270507699|gb|ACZ85977.1| ABC-type transport system involved in resistance to organic solvents permease component-like protein [Streptosporangium roseum DSM 43021] Length = 269 Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats. Identities = 52/249 (20%), Positives = 104/249 (41%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + S +G + E ++ + + I+Q +++ V+L+S GA Sbjct: 13 LVRRSTDVFGRVGDMSVIALEGFRRTWDVRTWFWEYIQQCWFLARVTSLPVLLVSLPLGA 72 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 +A Q Q GA + + + +RE+ + +A++IAG GSA+ ++IG+ I +E Sbjct: 73 TVALQVGQLAWQLGASSATGGAVVVGLVREVAPMASALLIAGAGGSAMTSDIGARNIRDE 132 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 + A+ M ++ + L++PR+WA LL L + G + +F Sbjct: 133 LAAMEVMAVNPIHRLVTPRLWAASTVAVLLVPLVIVAGAGGGYFFNVVIQGVTPGAYFDG 192 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 S +++ L KA I++ G +G+ V V + +V + Sbjct: 193 AVSLLVTSDLLVTLFKAWIFGFIAAIMSCYFGMTCQTSPVGVGRAVNQSTVVTFMLVFAV 252 Query: 361 DSLFAIFYF 369 + + + YF Sbjct: 253 NYVITMIYF 261 >gi|169631233|ref|YP_001704882.1| hypothetical protein MAB_4155c [Mycobacterium abscessus ATCC 19977] gi|169243200|emb|CAM64228.1| Conserved hypothetical protein [Mycobacterium abscessus] Length = 255 Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 100/245 (40%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + A +G +S + + ++ + Q +++ + +L++ ++ Sbjct: 3 QQLAAPARAVGGFVSMSLATFRNIFRRPFQGQEFLDQTWFIARVSLLPTLLVAIPFTVLV 62 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A L + GA S + + ++G ++T +++AG +AI A++G+ I EEID Sbjct: 63 AFTLNILLREIGAADLSGAATAFGTVTQLGPVVTVLVVAGAGATAICADLGARTIREEID 122 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++ +G+D ++ L+ PR+ A LL L ++G + + F + Sbjct: 123 AMQVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGMVGGYVFSVFLQGVNPGAFINGLT 182 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L + +KA G+V G V +G V VV + + +I+ Sbjct: 183 VLTGLGELMISEVKAFLFGIFAGLVGCYRGLTVKGGPKGVGDAVNETVVYAFICLFVINV 242 Query: 363 LFAIF 367 + Sbjct: 243 VMTAI 247 >gi|326331738|ref|ZP_08198026.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1] gi|325950537|gb|EGD42589.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1] Length = 257 Score = 180 bits (456), Expect = 5e-43, Method: Composition-based stats. Identities = 62/248 (25%), Positives = 115/248 (46%) Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 S +G + TGE ++ K L + Q +++ + +L+S GAVI+ Sbjct: 4 QFASLVRGVGGMGLMTGEVVKGTFTTKFQLREFLEQAWFITSVTMMPAVLVSIPFGAVIS 63 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q Q GA+ F+ + +RE + A++IAG +GSAI +++GS KI EEIDA Sbjct: 64 LQVGNLAGQLGAQSFAGATAVLAVVREAAPMAAALIIAGAAGSAICSDMGSRKIREEIDA 123 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + +G+D V L+ PR+ A + ++ + + I G F S F + Sbjct: 124 MEVLGIDPVVRLVIPRVLACLFVSVMINGIVIATGIGGGYFFTVIVQGGSAGAFLSSFTA 183 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 A+L +++ ++K+ I+ G + +G+ V V+ + ++ +++S+ Sbjct: 184 LASLPDLYISMVKSALFGFLAAIIGAYNGLNAQGGPSGVGRAVNEAVIIAFMMLFVLNSI 243 Query: 364 FAIFYFAI 371 YF I Sbjct: 244 MTAVYFQI 251 >gi|300784334|ref|YP_003764625.1| ABC transporter permease [Amycolatopsis mediterranei U32] gi|299793848|gb|ADJ44223.1| ABC transport system permease protein [Amycolatopsis mediterranei U32] Length = 283 Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats. Identities = 47/260 (18%), Positives = 104/260 (40%), Gaps = 10/260 (3%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCA-SSYKFKGFLLSLIRQMYYVGVSG-------- 167 + +++I LG ++ + A S + + +R + V Sbjct: 11 RTLEYIARPGQSLEGLGKQLAFAAKALAWSPRTIRRYSRETLRLLTEVCFGTGGLAVIGG 70 Query: 168 -VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + V+I ++ TG ++ QG L+Q G + + + RE+ L + ++ G Sbjct: 71 TLGVMIGMTLFTGLIVGLQGYSALNQLGTAALTGFISAYFNTREVAPLSAGLALSATVGC 130 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A++G+M+I+EEIDA+ MG+ + L++ R+ A + ++ L + S+ + + + Sbjct: 131 GFTAQLGAMRISEEIDALEVMGVPSMPYLVTTRVLAGVAAVIPLYAVGLLSSYLASRQIT 190 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 Y + F ++ K + + + GF +G V Sbjct: 191 IWLYGQSAGTYDHYFTLFLPPGDVLWSFGKVIVFSVLVILSHCYYGFNASGGPAGVGVAV 250 Query: 347 TTCVVQSISIVIIIDSLFAI 366 V SI ++ ++D ++ Sbjct: 251 GRAVRTSIVLISVLDFFLSL 270 >gi|300782534|ref|YP_003762825.1| ABC transporter permease [Amycolatopsis mediterranei U32] gi|41581798|gb|AAS07742.1| putative ABC-transporter permease [Amycolatopsis mediterranei S699] gi|299792048|gb|ADJ42423.1| ABC transport system permease protein [Amycolatopsis mediterranei U32] Length = 278 Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 106/259 (40%), Gaps = 10/259 (3%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGE-FCASSYKFKGFLLSLIRQMYYVGVSG------- 167 + + +N LG +S G + + + ++R + V Sbjct: 5 QGAKRVVNRPLQTLDTLGDQMSFYGRALLWTPRTLRRYTKEVLRLLAEVSFGSGSLAVIG 64 Query: 168 --VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 V V++ ++ TG ++ QG L+ G F+ L + REI L+ + ++ G Sbjct: 65 GTVGVMVGLTLFTGVLVGLQGYSALNSIGTSAFTGFLTAFFNTREIAPLVAGLALSATVG 124 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 + A++G+M+I+EEIDA+ MG+ + L++ RI A +++ L I+ S+ + + +V Sbjct: 125 AGFTAQLGAMRISEEIDALEVMGVPSLPYLVTTRIIAGFVAVIPLYIIGLLSSYLASRLV 184 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + Y + F ++ IK + I + G+ +G Sbjct: 185 VIYIYHQSAGTYDHYFDLFLPPQDVLYSFIKVLLFSVLIILSHCYFGYRATGGPAGVGVA 244 Query: 346 VTTCVVQSISIVIIIDSLF 364 V V SI V I++ Sbjct: 245 VGKAVRLSIVTVSIMNFFI 263 >gi|119714949|ref|YP_921914.1| hypothetical protein Noca_0702 [Nocardioides sp. JS614] gi|119535610|gb|ABL80227.1| protein of unknown function DUF140 [Nocardioides sp. JS614] Length = 275 Score = 179 bits (455), Expect = 6e-43, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 108/254 (42%), Gaps = 6/254 (2%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVPVVI 172 VK + S L I + ++K +L ++ ++ V V V++ Sbjct: 9 VKPLKTLDSLGEELAFFIKALAWTPRAIRRYKKEILRILAEVTLGSGALAVIGGTVGVIL 68 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 ++F TGA + G L Q G F+ + + REI L++ + +A G A++ Sbjct: 69 AMTFFTGAQVGLSGYAALDQLGTAAFAGFISAYFNTREIAPLVSGIALAATVGCGFTAQL 128 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 GSM+I+EE+DA+ M + + L++ RI +I++ L ++ ++ + + +++ Sbjct: 129 GSMRISEEVDALEVMAIPSLPFLVTTRIVGGLIAIIPLYVVGLLASYFATRLTVTQFFGQ 188 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 + F+S ++ K A + ++ G+ +G V V Sbjct: 189 SAGTYDHYFNSFLPPGDVLWSFGKVLVFAVTVILIHCYHGYTASGGPAGVGVAVGRAVRT 248 Query: 353 SISIVIIIDSLFAI 366 SI + +ID ++ Sbjct: 249 SIVAINVIDLFLSM 262 >gi|262201122|ref|YP_003272330.1| hypothetical protein Gbro_1129 [Gordonia bronchialis DSM 43247] gi|262084469|gb|ACY20437.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247] Length = 275 Score = 179 bits (455), Expect = 6e-43, Method: Composition-based stats. Identities = 53/251 (21%), Positives = 109/251 (43%), Gaps = 7/251 (2%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV-----SGVPVVIL 173 +K ++ + Q G ++ + + + L L + G + V++L Sbjct: 12 LKVLDGAGEQMSFYGRTLAWMPKTLV--HYTREVLRLLAEVAFGSGGLAVIGGTIGVMVL 69 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 +S TG V+ QG L Q G++ + L + + RE+ L+ + ++ G A++G Sbjct: 70 MSGFTGVVVGLQGYAALDQIGSQALTGFLSAYVNTREVAPLVAGLALSATVGCGFTAQLG 129 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 +M+I+EEIDA+ TM + + L+S R+ A +++ L +L SA + + ++ + Sbjct: 130 AMRISEEIDALETMAVPSIPFLVSTRVIAGFVAVIPLYVLGLLSAYLASRVITTVFNGQS 189 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 + F+ A++ K A I +V G+ +G V V + Sbjct: 190 GGSYDHYFNLFLPPADVLWSFGKVLVFAFVIILVHCYYGYYASGGPAGVGVAVGHAVRAA 249 Query: 354 ISIVIIIDSLF 364 + ++ I+D Sbjct: 250 LVLIAILDFFL 260 >gi|326333296|ref|ZP_08199543.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1] gi|325948940|gb|EGD41033.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1] Length = 284 Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats. Identities = 51/252 (20%), Positives = 99/252 (39%), Gaps = 2/252 (0%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N G + + + Q +++ +L++ VI Sbjct: 32 NALFKALASFGDFYAFVVSVFRKGFTHSFQFREFVSQAWFITTVSFWPALLVAIPFCVVI 91 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 Q L + GA + ++ +REIG +++ +++AG +AI A++GS KI EEID Sbjct: 92 IFQVNQLLIEIGAVDLAGAGAAVAVVREIGPIVSVLVVAGAGATAICADLGSRKIREEID 151 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ T+G+D + L+ PR+ A + L L ++G ++ + Sbjct: 152 AMTTLGIDPIHRLVVPRVAASTLVGIALNGLVTVVGLVGGYFFSVVLQGATPGLYLNDLT 211 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L++ KA G+ A G +G+ V VV + ++ +S Sbjct: 212 LLVGLSDFIAAEAKAAIFGLLAGLTACYLGLNAKGGPKGVGEAVNQTVVFAFMLLFAANS 271 Query: 363 LFAIFY--FAIG 372 + + + F +G Sbjct: 272 VISTLFLQFKLG 283 >gi|168699832|ref|ZP_02732109.1| probable permease of ABC transporter [Gemmata obscuriglobus UQM 2246] Length = 276 Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats. Identities = 69/236 (29%), Positives = 115/236 (48%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 G A + +R VG + V VV + G V+A Q Q Sbjct: 24 FGDWWLFAFRSLAGIFGRAFRAGEFLRVAVEVGTNSVGVVAITGTFIGMVLAVQAYGQFH 83 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 G E ++ I +RE+G +L AVM+AGR GSA+ AE+ +M++ E++DA+ +G+D Sbjct: 84 TIGMETSLGAVIHISVVRELGPVLAAVMLAGRVGSAMAAELATMRVTEQLDALACLGVDP 143 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V+ L+ PR+ A + LPLLT+LA+ + G+S++ Y I ++ L ++ Sbjct: 144 VKYLVGPRLLACFLLLPLLTVLADVMGLFGSSLICLHVYHIDSHHYWRHTREFVKLWDVS 203 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 GL+KA + ++A GF + +G+ T V + ++IID L A+ Sbjct: 204 VGLMKAFVFGAVLSLIACHRGFNSKAGAAGVGRAATEAFVIAFVAILIIDFLLAML 259 >gi|312141009|ref|YP_004008345.1| integral membrane protein yrbe4b [Rhodococcus equi 103S] gi|325675354|ref|ZP_08155038.1| ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] gi|311890348|emb|CBH49666.1| putative integral membrane protein YrbE4B [Rhodococcus equi 103S] gi|325553325|gb|EGD23003.1| ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] Length = 286 Score = 179 bits (454), Expect = 7e-43, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 115/257 (44%), Gaps = 9/257 (3%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVP 169 +K + ++++ Q I+ T +++ +L L+ ++ + V + Sbjct: 20 RKPLDVLDNAGEQMSFYSRAIAWTPRTLR---RYRKEMLRLLAEVTFGSGALAVIGGTIG 76 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V++++S TG V+ QG L Q G+ + + L + + REI ++ A+ ++ G Sbjct: 77 VIVMMSGFTGVVVGLQGFAALDQLGSSVLTGFLSAYVNTREIAPIVAALALSATVGCGFT 136 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A++G+M+I+EEIDA+ M + V L++ R+ A +++ L I+ +A + + +V + Sbjct: 137 AQLGAMRISEEIDALEVMAVPSVPFLVTTRMIAGFVAVIPLYIVGLLAAYLASRVVSTVF 196 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 + F+ ++ K A + ++ GF +G V Sbjct: 197 NGQSSGSYDHYFNLFLPPEDVLWSFGKVLVFAFVLILIHCYYGFHARGGPAGVGVAVGHA 256 Query: 350 VVQSISIVIIIDSLFAI 366 V +I + ++D ++ Sbjct: 257 VRTAIVTIAVLDFFLSL 273 >gi|315442585|ref|YP_004075464.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|315260888|gb|ADT97629.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 237 Score = 178 bits (453), Expect = 8e-43, Method: Composition-based stats. Identities = 49/234 (20%), Positives = 96/234 (41%), Gaps = 4/234 (1%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 + + + ++F+ FL Q + + + +L++ ++A L + Sbjct: 1 MSLDTFVKTFRRPFQFREFL----EQTWMIARVSLVPTLLVAIPFTVLVAFTLNILLREI 56 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 GA S + + ++G ++T +++AG +AI A++G+ I EEIDA+R +G+D ++ Sbjct: 57 GAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQ 116 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 L+ PR+ A LL L + G + + F + L + Sbjct: 117 RLVVPRVLASTFVALLLNGLVCLIGLSGGYVFSVFLQGVNPGSFINGLTVLTGLPELILA 176 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 IKA G+V G V +G V VV + + +I+ + Sbjct: 177 EIKALLFGFVAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVIMTAI 230 >gi|296139954|ref|YP_003647197.1| hypothetical protein Tpau_2249 [Tsukamurella paurometabola DSM 20162] gi|296028088|gb|ADG78858.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM 20162] Length = 279 Score = 178 bits (453), Expect = 8e-43, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 111/268 (41%), Gaps = 9/268 (3%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY-- 162 SF + +K ++ + Q G I + A ++ + ++ ++ + Sbjct: 3 RSFTDKARKAAGAPLKVLDGAGEQMSFYGRSIGFIPQSIA---RYPKEVGRVLAEVAFGS 59 Query: 163 ----VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 V V VV+++ TG V+ QG L Q GA + + L + + RE+ L+ A+ Sbjct: 60 GALAVIAGTVGVVLMLCGFTGIVVGLQGNAALQQLGASVMTGFLSAYVNTRELTPLVAAL 119 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++ G A++G+M+I+EEIDA+ M + + L + R+ A +++ L I+ ++ Sbjct: 120 AMSATVGCGFTAQLGAMRISEEIDALEAMAIPSISFLTATRVIAGFVAVIPLYIVGLLAS 179 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 + V + F+ + ++ K A + +V G+ Sbjct: 180 YVMTRFVNTTLLGQSTGTYDHYFNLFLSPDDVLWSFGKVLVFAFVLVLVHCYYGYNASGG 239 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAI 366 +G V V S+ + ++D ++ Sbjct: 240 PAGVGVAVGRAVRTSLVAIALLDFFLSL 267 >gi|257054989|ref|YP_003132821.1| ABC-type transport system involved in resistance to organic solvents, permease component [Saccharomonospora viridis DSM 43017] gi|256584861|gb|ACU95994.1| ABC-type transport system involved in resistance to organic solvents, permease component [Saccharomonospora viridis DSM 43017] Length = 281 Score = 178 bits (453), Expect = 9e-43, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 105/263 (39%), Gaps = 10/263 (3%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVSG----- 167 + +++ ++ S LG + + A + + ++R + V Sbjct: 6 VRQRVAHTLDRRLSFLDTLGESVLFSLRALAWIPRALRRYPREIVRLLAEVSFGSGALAV 65 Query: 168 ----VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 + V++ ++ TG V+ QG L Q G F+ + + REI L+ + ++ Sbjct: 66 IGGTIGVMVGMTMFTGIVVGLQGYTALDQVGTAAFAGFISAYFNTREIAPLVAGLALSAT 125 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 G A++GSM+I+EEIDA+ MG+ V L++ R+ A ++ L + ++ + + Sbjct: 126 VGCGFTAQLGSMRISEEIDALEVMGVPSVPYLVTTRVIAGFCAIIPLYAIGLLTSYVASR 185 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 + +Y + F ++ K + + + GF +G Sbjct: 186 QITVWFYGQSEGTYDHYFELFLPPEDVLWSFGKVLLFSVVVVMTHCYYGFRASGGPAGVG 245 Query: 344 KKVTTCVVQSISIVIIIDSLFAI 366 V V +I V ++D ++ Sbjct: 246 VAVGRAVRTAIVAVALLDFFASL 268 >gi|256380616|ref|YP_003104276.1| hypothetical protein Amir_6633 [Actinosynnema mirum DSM 43827] gi|255924919|gb|ACU40430.1| protein of unknown function DUF140 [Actinosynnema mirum DSM 43827] Length = 279 Score = 178 bits (453), Expect = 9e-43, Method: Composition-based stats. Identities = 51/261 (19%), Positives = 103/261 (39%), Gaps = 6/261 (2%) Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGV 165 + + S L + + ++ +L L+ ++ + V Sbjct: 6 ERARRAASAPLRGLDSLGDQLWFYLRALAWAPRAITRYHREVLRLLAEVSFGSGALAVIG 65 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 + V++ +S TG V+ QG L Q G F+ + + REI L+ + ++ G Sbjct: 66 GTIGVMVGLSVFTGTVVGLQGFTALDQIGTSAFAGFVSAYFNTREIAPLVAGLALSATVG 125 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 S A++G+M+I+EEIDA+ MG+ + L++ RI A ++ L ++ ++ + A V Sbjct: 126 SGFTAQLGAMRISEEIDALEVMGVPSLPYLVTTRIVAGFAAIVPLYVIGLLTSYLAARTV 185 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 +Y + F ++ K A I + G+ +G Sbjct: 186 TVHFYGQSAGTYDHYFTLFLPPEDVLWSFGKVLVFAVVIILTHCYYGYRASGGPAGVGVA 245 Query: 346 VTTCVVQSISIVIIIDSLFAI 366 V V +I ++D ++ Sbjct: 246 VGRAVRTAIVTTSLLDFFLSL 266 >gi|291004489|ref|ZP_06562462.1| putative ABC transport system permease protein [Saccharopolyspora erythraea NRRL 2338] Length = 279 Score = 178 bits (453), Expect = 9e-43, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 109/254 (42%), Gaps = 9/254 (3%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVI 172 ++F++D Q + + ++ + L+ ++ + V V V++ Sbjct: 16 LEFLDDLGDQMSF---YLRTLAWIPKAVTRYVKETMRLLAEVSFGSGALAVIGGTVGVMV 72 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 ++ TG V+ QG L+Q G F+ + + REI L+ + ++ GS A++ Sbjct: 73 GMTLFTGTVVGLQGYAALNQIGTSAFAGFVSAYFNTREIAPLVAGLALSATVGSGFTAQL 132 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 G+M+I++EIDA+ TMG+ + L++ R+ A +++ L +L ++ + A +V Y Sbjct: 133 GAMRISDEIDALETMGVPSLPYLVTTRVVAGFVAVVPLYVLGLLTSYLAARLVTVHVYGQ 192 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 + F+ ++ K + + + G+ +G V V Sbjct: 193 SAGTYDHYFNLFLPPEDVLWSFGKVLVFSVVVIMTHCYYGYRASGGPAGVGVAVGRAVRT 252 Query: 353 SISIVIIIDSLFAI 366 +I ++D ++ Sbjct: 253 AIVTTALLDFFLSL 266 >gi|119717049|ref|YP_924014.1| hypothetical protein Noca_2825 [Nocardioides sp. JS614] gi|119537710|gb|ABL82327.1| protein of unknown function DUF140 [Nocardioides sp. JS614] Length = 279 Score = 178 bits (453), Expect = 1e-42, Method: Composition-based stats. Identities = 51/264 (19%), Positives = 106/264 (40%), Gaps = 11/264 (4%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG--- 167 +G + DS Q ++ + + + ++ + V Sbjct: 4 ISALGGSFYRGRRDSLEQYGD--QLLFYVKALSWTPRAIRRYPREIVNTLAEVTFGAGGL 61 Query: 168 ------VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221 V V+ ++F G + QG LSQ G FS + + RE+ L++A+ +A Sbjct: 62 SLIAGTVGVIAFLAFFAGTEVGIQGYASLSQIGVAKFSAFISAYFNTREVAPLVSAIALA 121 Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281 G A +G+M+I+EEIDA+ MG+ + L++ R+ A +++ L ++A ++ + Sbjct: 122 ATVGCGYTARLGAMRISEEIDALEVMGIPSLPFLVTTRMVAAFVAVIPLYVVALSASYLS 181 Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341 ++ Y + F ++ K F+A A+ ++ G+ Sbjct: 182 PRLITTLVYGQSPGTYDHYFLQFLPPIDMLWSFFKLLFLAAAVILIHCYYGYTASGGPAG 241 Query: 342 LGKKVTTCVVQSISIVIIIDSLFA 365 +G V + SI +++ D + Sbjct: 242 VGMAVGRAIRTSIVTIVVADFFLS 265 >gi|149921451|ref|ZP_01909903.1| ABC-type transport system involved in resistance to organic solvents, permease component [Plesiocystis pacifica SIR-1] gi|149817654|gb|EDM77121.1| ABC-type transport system involved in resistance to organic solvents, permease component [Plesiocystis pacifica SIR-1] Length = 251 Score = 178 bits (453), Expect = 1e-42, Method: Composition-based stats. Identities = 61/249 (24%), Positives = 112/249 (44%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G ++ + +++ +L + M + + V L GAVI+ Sbjct: 3 LLRMLQTIGGLVVFMAQVARATFSRPFYLRQTLDIMAILVQRCIVPVGLAVAPVGAVISL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG FGAE + +RE L +VM+A ++GS+I A IG+MK+ +IDA+ Sbjct: 63 QGIAVFKLFGAERMLSAFLGTAIIREYSPALASVMVAAQAGSSIAARIGTMKVRGQIDAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D VR ++ P + A ++ PLL+++ N I+ I + F + Sbjct: 123 AVMSVDPVRYVVVPGVLACVLVTPLLSVVTNLLGILSGWIFAVPLGGVDHGAFMDNLTAQ 182 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 T +++ GL K +G++A G VG + +GK VV +I +++ D + Sbjct: 183 ITPMDLWVGLGKCAVFGLGVGMIAGYLGLNVGRGAADVGKAANDTVVSTIVLILFTDYVV 242 Query: 365 AIFYFAIGI 373 ++ G+ Sbjct: 243 SMALLGAGL 251 >gi|84494809|ref|ZP_00993928.1| putative ABC transporter integral membrane protein [Janibacter sp. HTCC2649] gi|84384302|gb|EAQ00182.1| putative ABC transporter integral membrane protein [Janibacter sp. HTCC2649] Length = 203 Score = 178 bits (453), Expect = 1e-42, Method: Composition-based stats. Identities = 60/198 (30%), Positives = 99/198 (50%) Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 +S GAVIA Q Q GA+ F+ + +RE ++TA++IAG GSAI A++G Sbjct: 1 MSIPFGAVIALQLGTLTRQLGAQSFTGAASVLAVVREASPIVTALLIAGAGGSAICADLG 60 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 S KI EE+DA+ +G+ ++ L+ PR+ A ++ LL L + + G Sbjct: 61 SRKIREELDAMEVLGISPIQRLVVPRVLATMLVAVLLNGLVSVVGVGGGYFFNVVIQGGT 120 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 + + F + A LA+++T IKA IVA +G G +G V VV + Sbjct: 121 PGAYLASFTALAQLADLWTSEIKALLFGAVAAIVASYKGLTAGGGPKGVGDAVNQSVVIT 180 Query: 354 ISIVIIIDSLFAIFYFAI 371 ++ +I+ + + YF + Sbjct: 181 FMLLFVINFVISAIYFQV 198 >gi|313204340|ref|YP_004042997.1| hypothetical protein Palpr_1873 [Paludibacter propionicigenes WB4] gi|312443656|gb|ADQ80012.1| protein of unknown function DUF140 [Paludibacter propionicigenes WB4] Length = 246 Score = 178 bits (453), Expect = 1e-42, Method: Composition-based stats. Identities = 58/246 (23%), Positives = 106/246 (43%), Gaps = 1/246 (0%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 S + G + A ++K F +++ +G+ +P+V +IS G ++ Q Sbjct: 1 MSLLNNTGKYVLLMKRVFAKPDRWKMFFRQFPKELEKLGLQSLPIVAIISIFIGFIMTMQ 60 Query: 186 GAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 + +++ L++ L E + +++AG+ GS I +EIG+M+I E+IDA+ Sbjct: 61 TKLNTANPLLPVYTTGLVTRDTLLLEFSSTILCLILAGKVGSNIASEIGTMRITEQIDAL 120 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG++ LI P+I A II +P L + + I G V + + + Sbjct: 121 EIMGVNSANYLILPKIAAFIIMMPFLVVFSMALGIFGGYFVGVLTSIMTTGDYLTGIQYA 180 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +F LIK+ A I VA G+ + +GK T VV +++ + L Sbjct: 181 FVPFYVFYSLIKSMIFAFIISSVAAYYGYYAYGGALDVGKASTNAVVNGSVLILFFNILI 240 Query: 365 AIFYFA 370 Sbjct: 241 TKIMLN 246 >gi|257054990|ref|YP_003132822.1| ABC-type transport system involved in resistance to organic solvents, permease component [Saccharomonospora viridis DSM 43017] gi|256584862|gb|ACU95995.1| ABC-type transport system involved in resistance to organic solvents, permease component [Saccharomonospora viridis DSM 43017] Length = 267 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 50/223 (22%), Positives = 96/223 (43%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + G + + E + ++Q +++ + L++ G VIA Sbjct: 17 AAIRQAGKLYALALEVLRCIPRRPFQFREFVQQFWFIASVSILPTALVAIPFGGVIALHV 76 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 +Q GA+ F+ + +++ ++TA++IAG GSA+ A++GS I EEIDA++ Sbjct: 77 GSLTTQIGAQSFTGAASVLAIIQQASPIVTALLIAGAGGSAMCADLGSRTIREEIDALKV 136 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +G+ ++ L+ PR+ A + L + + + G D + + F + A Sbjct: 137 LGVSPIQRLVVPRVLAAMAVAVFLNGMVSVVGVCGGYFFNVIMQDGTPGAYLASFSALAQ 196 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 L +++ G IKA G+VA G +G V Sbjct: 197 LPDLWIGEIKALVFGFVAGVVAAHRGLNPSAGPKGVGDAVNQS 239 >gi|145220618|ref|YP_001131296.1| hypothetical protein Mflv_0012 [Mycobacterium gilvum PYR-GCK] gi|145213104|gb|ABP42508.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] Length = 312 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 55/233 (23%), Positives = 106/233 (45%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + F + + +RQ ++ + V +L++ G ++ Q A Q GA Sbjct: 71 VRTLQWFFVDLFTGRFQFQEFVRQGAFMAGTAVLPTVLVALPIGVTLSIQFALLAGQVGA 130 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 + + +R+ L A+++A GSAI A++GS K+ EE DA+ MG+ +R L Sbjct: 131 TSLAGAASGLAVIRQAASLTAAILMAAAVGSAITADLGSRKMREETDAMEVMGVSVIRRL 190 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PR A I+ LT + F + + + + + F + F S AT ++ L+ Sbjct: 191 VVPRFAAAIMIGVALTGVVCFVGFLASYLFNVYFQNGAPGSFVATFASFATTGDMIVALV 250 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 KA + IV+ ++G + + V VV+SI ++++++ + Y Sbjct: 251 KAVIFGAIVAIVSCQKGLSTQGGPTGVANSVNAAVVESILVLMVVNVAISQLY 303 >gi|226361064|ref|YP_002778842.1| YrbE family protein [Rhodococcus opacus B4] gi|226239549|dbj|BAH49897.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 286 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 113/261 (43%), Gaps = 9/261 (3%) Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGV 165 +G+ + ++ + Q I+ + ++ +L L+ ++ + V Sbjct: 16 RRVGRAPLNVLDRAGEQMSFYARAIAWSPHTLVH---YRKEVLRLLAEVTFGSGALAVIG 72 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 + V+ ++S TG V+ QG L Q G+ + + L + + REI ++ A+ ++ G Sbjct: 73 GTIGVIAMMSGFTGVVVGLQGFAALEQLGSSVLTGFLSAYVNTREIAPIVAALALSATVG 132 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 A++G+M+I+EEIDA+ M + V L++ R+ A +++ L I+ +A + + ++ Sbjct: 133 CGFTAQLGAMRISEEIDALEVMAVPSVPFLVTTRMIAGFVAVIPLYIVGLLAAYLASRVI 192 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + + F+ ++ K A + ++ G+ +G Sbjct: 193 STVFNGQSTGSYDHYFNLFLPPQDVLYSFAKVLIFAFVLILIHCYYGYHASGGPAGVGVA 252 Query: 346 VTTCVVQSISIVIIIDSLFAI 366 V V +I + ++D ++ Sbjct: 253 VGRAVRTAIVTIAVLDFFLSL 273 >gi|311744834|ref|ZP_07718630.1| ABC superfamily ATP binding cassette transporter permease protein [Aeromicrobium marinum DSM 15272] gi|311311951|gb|EFQ81872.1| ABC superfamily ATP binding cassette transporter permease protein [Aeromicrobium marinum DSM 15272] Length = 258 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 4/247 (1%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + + ++ ++ + FLL Q Y+ + L++ GAVIA Sbjct: 10 ARAAGGLFAFMLDVFMALFKRPFQMREFLL----QAYFTIRVTIVPTALVAIPFGAVIAL 65 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q + QFGA+ F+ + +R G + TA++IAG +GSAI A+ G+ KI EE+DA+ Sbjct: 66 QVGGLIKQFGAQSFTGSAAVLAVVRNAGPIATALLIAGAAGSAIAADFGARKIREELDAM 125 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 +G+D ++ L+ PR+ A+++ L L F + G + D + + F + Sbjct: 126 MVLGIDPIQRLVVPRVLAVMLIAVFLNGLVTFVGVAGGYVFNVLLQDGTPGAYLASFTAL 185 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A L +I G++KA IVA +G +G V VV + ++ ++ + Sbjct: 186 AQLPDILQGMVKAVIFGFLAAIVASYKGMNAKGGPKGVGDAVNEAVVITFVLLFAVNFVV 245 Query: 365 AIFYFAI 371 + Y + Sbjct: 246 SALYIQL 252 >gi|124005927|ref|ZP_01690765.1| domain of unknown function superfamily [Microscilla marina ATCC 23134] gi|123988610|gb|EAY28251.1| domain of unknown function superfamily [Microscilla marina ATCC 23134] Length = 248 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 59/244 (24%), Positives = 112/244 (45%), Gaps = 1/244 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + +FK ++ I + +G+ V +V++ S GAV A Q A+ Sbjct: 1 MQTLGKYCIFIASLFYNRERFKVYVRLTIDECMRIGIDSVFIVVITSTFIGAVAAVQTAY 60 Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L ++ ++ + + E +T +++AG+ GS I +G+M+I E++DAI M Sbjct: 61 NLVSPAIPLYVIGTIVRDMAILEFAPTITCIVLAGKVGSNIAGGLGTMRITEQVDAIEVM 120 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ L+ P+I A +I++P+L ++A F +I+G I + + + Sbjct: 121 GINAASYLVLPKITAALITIPMLCVIAGFLSIMGGFISGTVTGALTESQYIYGIRWDFNP 180 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 I+ +IK+ A I ++ +GF + +G+ T V S V+ D + A Sbjct: 181 GGIYFAIIKSFVFAYLISSISAFKGFFTTGGALEVGQSSTNAVTSSTIAVLFADYILAQL 240 Query: 368 YFAI 371 I Sbjct: 241 LAGI 244 >gi|254797049|ref|YP_003081887.1| ABC transporter permease protein [Neorickettsia risticii str. Illinois] gi|254590296|gb|ACT69658.1| ABC transporter permease protein [Neorickettsia risticii str. Illinois] Length = 250 Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats. Identities = 60/249 (24%), Positives = 119/249 (47%), Gaps = 2/249 (0%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 N + ILG S K + L +I+Q++ +G +P+V + GA Sbjct: 1 MYNHIKNTIKILGDFTLFNLNIFLSGRKM--YFLEIIKQLFLIGYYSMPIVAFSAVFMGA 58 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 ++A L F ++ +++ REIG ++ +++AGR S I AEIG+M++ E+ Sbjct: 59 MLALHTYTGLDLFQSQTMVAQILAKSITREIGPVVVGIVVAGRVASTIAAEIGTMRVTEQ 118 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +D +R++ ++ L+ P+I A +IS P+L I++ ++G ++ + ++ S Sbjct: 119 VDLLRSLSINVHAYLVLPKIIAALISFPVLEIISALFGMLGGYLIGTYKFAFSKMLYISD 178 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + T A++ +G+ KA F V+ + +G VT VV S ++++ Sbjct: 179 TLTFITYADLMSGMTKAFFFGFITASVSCFNALRATHGAKGVGIAVTNSVVASFVLILLS 238 Query: 361 DSLFAIFYF 369 + L + F Sbjct: 239 NYLITLAIF 247 >gi|111018969|ref|YP_701941.1| hypothetical protein RHA1_ro01972 [Rhodococcus jostii RHA1] gi|110818499|gb|ABG93783.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length = 274 Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 113/261 (43%), Gaps = 9/261 (3%) Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGV 165 +G+ + ++ + Q I+ + ++ +L L+ ++ + V Sbjct: 4 RRVGRAPLNVLDRAGEQMSFYARAIAWSPHTLVH---YRKEVLRLLAEVTFGSGALAVIG 60 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 + V+ ++S TG V+ QG L Q G+ + + L + + REI ++ A+ ++ G Sbjct: 61 GTIGVIAMMSGFTGVVVGLQGFAALEQLGSSVLTGFLSAYVNTREIAPIVAALALSATVG 120 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 A++G+M+I+EEIDA+ M + V L++ R+ A +++ L I+ +A + + I+ Sbjct: 121 CGFTAQLGAMRISEEIDALEVMAVPSVPFLVTTRMIAGFVAVIPLYIVGLLAAYLASRII 180 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + + F+ ++ K A + ++ G+ +G Sbjct: 181 STVFNGQSTGSYDHYFNLFLPPQDVLYSFAKVLVFAFVLILIHCYYGYHASGGPAGVGVA 240 Query: 346 VTTCVVQSISIVIIIDSLFAI 366 V V +I + ++D ++ Sbjct: 241 VGRAVRTAIVTIAVLDFFLSL 261 >gi|145222146|ref|YP_001132824.1| hypothetical protein Mflv_1554 [Mycobacterium gilvum PYR-GCK] gi|145214632|gb|ABP44036.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] Length = 237 Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 49/234 (20%), Positives = 96/234 (41%), Gaps = 4/234 (1%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 + + + ++F+ FL Q + + + +L++ ++A L + Sbjct: 1 MSLDTFVKTFRRPFQFREFL----EQTWMIARVSLVPTLLVAIPFTVLVAFTLNILLREI 56 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 GA S + + ++G ++T +++AG +AI A++G+ I EEIDA+R +G+D ++ Sbjct: 57 GAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQ 116 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 L+ PR+ A LL L + G + + F + L + Sbjct: 117 RLVVPRVLASTFVALLLNGLVCLIGLSGGYVFSVFLQGVNPGSFINGLTVLTGLPELILA 176 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 IKA G+V G V +G V VV + + +I+ + Sbjct: 177 EIKALLFGVVAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVIMTAI 230 >gi|190343261|gb|ACE75649.1| ABC transporter permease protein [Candidatus Nitrospira defluvii] Length = 259 Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 62/257 (24%), Positives = 122/257 (47%), Gaps = 2/257 (0%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + +G+K + + A + + + + L L+RQ+ + GV +P Sbjct: 1 MIEWVGRKAIAGYTYLAALATLFTQAVLDL--LLPTRQGRGETLRVLVRQILFTGVDALP 58 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V +I+ + G +I Q QL + GA ++ + +RE+G L+TA ++ GRSG+AI Sbjct: 59 VTTVIALLLGIIIVTQAGTQLPRLGAGGLVGSIIVVTVIRELGPLITAFIVVGRSGTAIA 118 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 E+G+M + E+ A+R MG+ R +I PR+ +++S+ LT+ + A++G ++ Sbjct: 119 TELGNMSVTREVVALRLMGISISRFVIMPRMVGMVLSMLCLTLYFDVVAVLGGYLIADAQ 178 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 IPF F + ++ IK A+ + G AV + ++ T Sbjct: 179 LTIPFYAFVESITKALSTTDVLMTAIKGLSFGSAVAAICCYHGLAVRSSFTEVPQQTTRA 238 Query: 350 VVQSISIVIIIDSLFAI 366 ++ S + ++ID + + Sbjct: 239 MINSFVLCLLIDVVVTV 255 >gi|240170056|ref|ZP_04748715.1| membrane protein YrbE4A [Mycobacterium kansasii ATCC 12478] Length = 254 Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 98/243 (40%), Gaps = 4/243 (1%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + + I ++F+ FL Q + V + +L+S ++A Sbjct: 9 ARAVGGFFEMSIDTGRAALRRPFQFREFL----DQTWMVARVSLVPTLLVSIPFTVLVAF 64 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 L + GA S + + ++G ++T +++AG +AI A++G+ I EEIDA+ Sbjct: 65 TLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAM 124 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R +G+D ++ L+ PR+ A + LL L + G + + F + Sbjct: 125 RVLGIDPIQRLVVPRVLASTLVALLLNGLVCAIGLSGGYVFSVFLQGVNPGAFINGLTVL 184 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L + +KA G+V G V +G V VV + + +I+ + Sbjct: 185 TGLRELILAEVKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVM 244 Query: 365 AIF 367 Sbjct: 245 TAI 247 >gi|88608548|ref|YP_506573.1| putative ABC transporter, permease protein [Neorickettsia sennetsu str. Miyayama] gi|88600717|gb|ABD46185.1| putative ABC transporter, permease protein [Neorickettsia sennetsu str. Miyayama] Length = 250 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 56/249 (22%), Positives = 116/249 (46%), Gaps = 2/249 (0%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 N + I G + S K + +I+Q++ +G +P+V + GA Sbjct: 1 MYNHIKNTIKIFGDFTLFSLSTFLSGR--KIYFSEIIKQLFLIGYYSMPIVAFSAVFIGA 58 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 ++A L F ++ +++ REIG ++ +++AGR S I AEIG+M++ E+ Sbjct: 59 MLAFHTYTGLDLFQSQTMVAQILAKSITREIGPVVVGIVVAGRVASTIAAEIGTMRVTEQ 118 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +D +R++ ++ L+ P+I A +IS P+L I++ ++G ++ + ++ S Sbjct: 119 VDLLRSLSINVHAYLVLPKIIAALISFPVLEIVSTLFGMLGGYLIGTYKFAFSKMLYVSD 178 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + T ++ G+ K+ F V+ + +G VT VV S ++++ Sbjct: 179 TLTFLTSKDLIAGMTKSFFFGFITASVSCFNALRATHGAKGVGIAVTNSVVASFVLILLS 238 Query: 361 DSLFAIFYF 369 + L + F Sbjct: 239 NYLITLAIF 247 >gi|300775379|ref|ZP_07085241.1| ABC superfamily ATP binding cassette transporter permease protein [Chryseobacterium gleum ATCC 35910] gi|300506119|gb|EFK37255.1| ABC superfamily ATP binding cassette transporter permease protein [Chryseobacterium gleum ATCC 35910] Length = 250 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 3/246 (1%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G I G+ K + F +R++ +GV+ +V+ S GAV+A Sbjct: 2 LKKFFTAVGEYIILLGKSLQKPQKMRVFWKLFMREINDLGVNSFGLVVFTSIFVGAVVAI 61 Query: 185 QGAFQLSQ---FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 Q F + + E + ++++AG+ GS I + IG+M+++E+I Sbjct: 62 QMFNNFDASSFPIPTSFVGYATKAVLVLEFSPTIISLILAGKVGSYIASSIGTMRVSEQI 121 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ MG++ LI P+I A ++ PLL ++ I G I + + Sbjct: 122 DALDIMGVNSPNFLIFPKIVACVLFNPLLIAISIVFGIGGGYIAGILTGNWTENDYIVGI 181 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 I+ IK A I V G+ V S +G+ T VV ++ +II + Sbjct: 182 QMYMPNLFIYYAFIKTTVFAFIIATVPSYFGYNVKGGSLEVGRASTQAVVWTMVFIIISE 241 Query: 362 SLFAIF 367 + Sbjct: 242 LILTQL 247 >gi|225010488|ref|ZP_03700959.1| protein of unknown function DUF140 [Flavobacteria bacterium MS024-3C] gi|225005317|gb|EEG43268.1| protein of unknown function DUF140 [Flavobacteria bacterium MS024-3C] Length = 245 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 54/244 (22%), Positives = 100/244 (40%), Gaps = 2/244 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 Q +G E ++K +++++ + + +VI +SF G V+ Q A Sbjct: 3 QLAAIGQYFLMIREVFKKPTRWKVMRGLILKEIDELIYGSMGIVIFVSFFIGGVVTIQTA 62 Query: 188 FQLSQFGAE-IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 L+ + E T++++AG+ GS I + IGSM++ E+IDA+ Sbjct: 63 LNLNSPLIPKNLIGFAARQSVILEFAPTFTSIIMAGKVGSFITSSIGSMRVTEQIDALEV 122 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG++ + L+ P+I AL + P + +A + I G + A F Sbjct: 123 MGINSLNYLVFPKIIAL-LMYPFVIAIAMYLGIFGGFLAGVFGGFSTAADFIEGVRIDFV 181 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 ++ IK F A I V G+ + + +GK TT V + ++I + + Sbjct: 182 PFHVAYAFIKTMFFAFIIATVPSFHGYYMKGGALEVGKASTTSFVWTAVVIITTNYILTQ 241 Query: 367 FYFA 370 Sbjct: 242 LLLG 245 >gi|118470037|ref|YP_890128.1| hypothetical protein MSMEG_5902 [Mycobacterium smegmatis str. MC2 155] gi|118171324|gb|ABK72220.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length = 254 Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats. Identities = 51/247 (20%), Positives = 99/247 (40%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 I A +G + + + A ++ L + Q + + + +L++ Sbjct: 1 MIEQLAVPARAVGGFVEMSLDTFAKIFRRPFQLKEFLDQTWMIARVSLVPTLLVAIPFTV 60 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 ++A L + GA S + + ++G ++T +++AG +AI A++G+ I EE Sbjct: 61 LVAFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREE 120 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+R +G+D ++ L+ PR+ A LL L + G + + F + Sbjct: 121 IDAMRVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGLAGGYVFSVFLQGVNPGAFING 180 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 L + IKA G+V G V +G V VV + + +I Sbjct: 181 LTVLTGLGELVLAEIKALLFGVVAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVI 240 Query: 361 DSLFAIF 367 + + Sbjct: 241 NVIMTAV 247 >gi|89891419|ref|ZP_01202925.1| putative ABC transporter [Flavobacteria bacterium BBFL7] gi|89516450|gb|EAS19111.1| putative ABC transporter [Flavobacteria bacterium BBFL7] Length = 246 Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 93/243 (38%), Gaps = 2/243 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +G I K +++++ + + + + IS GAV+A Q A Sbjct: 3 FLRHIGKYILMLIGIFKRPTKTSVLRELILKEIDDLVIGSIGITAFISLFMGAVVALQTA 62 Query: 188 FQLSQFGAE-IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 L + E +V++AG+ GS I + IG+M++ E+IDA+ Sbjct: 63 LNLDNPLIPKSLIGFATRQSIILEFAPTFISVIMAGKVGSYITSSIGTMRVTEQIDALEV 122 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG++ + LI P+I AL+ P L + F I G + + F + Sbjct: 123 MGINPLNYLIYPKIIALLF-YPFLIAIIMFVGIFGGFLASVYGNLVSLEDFIVGLQDSFI 181 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 ++ IK + + G+ + + +GK TT V + +I+ + + Sbjct: 182 PWHVAYAFIKTMVFGILLATIPSYHGYYMEGGALEVGKASTTSFVWTCVAIIVANYILTQ 241 Query: 367 FYF 369 Sbjct: 242 ILL 244 >gi|15610637|ref|NP_218018.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis H37Rv] gi|31794677|ref|NP_857170.1| integral membrane protein YrbE4a [Mycobacterium bovis AF2122/97] gi|121639420|ref|YP_979644.1| integral membrane protein YrbE4a [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148663365|ref|YP_001284888.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis H37Ra] gi|148824708|ref|YP_001289462.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis F11] gi|167967132|ref|ZP_02549409.1| conserved membrane protein YrbE4A [Mycobacterium tuberculosis H37Ra] gi|215405542|ref|ZP_03417723.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis 02_1987] gi|215413414|ref|ZP_03422098.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis 94_M4241A] gi|215429007|ref|ZP_03426926.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis T92] gi|215432469|ref|ZP_03430388.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis EAS054] gi|215447834|ref|ZP_03434586.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis T85] gi|218755278|ref|ZP_03534074.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis GM 1503] gi|219559568|ref|ZP_03538644.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis T17] gi|224991916|ref|YP_002646605.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253800543|ref|YP_003033544.1| hypothetical protein TBMG_03546 [Mycobacterium tuberculosis KZN 1435] gi|254234087|ref|ZP_04927412.1| hypothetical integral membrane protein yrbE4A [Mycobacterium tuberculosis C] gi|254366847|ref|ZP_04982888.1| hypothetical integral membrane protein yrbE4A [Mycobacterium tuberculosis str. Haarlem] gi|254552603|ref|ZP_05143050.1| hypothetical protein Mtube_19505 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260188553|ref|ZP_05766027.1| hypothetical protein MtubCP_21377 [Mycobacterium tuberculosis CPHL_A] gi|260202680|ref|ZP_05770171.1| hypothetical protein MtubT4_21968 [Mycobacterium tuberculosis T46] gi|260206868|ref|ZP_05774359.1| hypothetical protein MtubK8_21506 [Mycobacterium tuberculosis K85] gi|289445098|ref|ZP_06434842.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis T46] gi|289449203|ref|ZP_06438947.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis CPHL_A] gi|289555767|ref|ZP_06444977.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis KZN 605] gi|289571734|ref|ZP_06451961.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis T17] gi|289576235|ref|ZP_06456462.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis K85] gi|289747337|ref|ZP_06506715.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis 02_1987] gi|289752222|ref|ZP_06511600.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis T92] gi|289755631|ref|ZP_06515009.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis EAS054] gi|289759660|ref|ZP_06519038.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|289763681|ref|ZP_06523059.1| hypothetical integral membrane protein yrbE4A [Mycobacterium tuberculosis GM 1503] gi|294995729|ref|ZP_06801420.1| hypothetical protein Mtub2_14793 [Mycobacterium tuberculosis 210] gi|297636157|ref|ZP_06953937.1| hypothetical protein MtubK4_18625 [Mycobacterium tuberculosis KZN 4207] gi|297733157|ref|ZP_06962275.1| hypothetical protein MtubKR_18795 [Mycobacterium tuberculosis KZN R506] gi|298526981|ref|ZP_07014390.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|306777851|ref|ZP_07416188.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu001] gi|306782582|ref|ZP_07420919.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu002] gi|306786400|ref|ZP_07424722.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu003] gi|306790769|ref|ZP_07429091.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu004] gi|306795299|ref|ZP_07433601.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu005] gi|306799487|ref|ZP_07437789.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu006] gi|306805333|ref|ZP_07442001.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu008] gi|306809519|ref|ZP_07446187.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu007] gi|306969626|ref|ZP_07482287.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu009] gi|306973969|ref|ZP_07486630.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu010] gi|307081677|ref|ZP_07490847.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu011] gi|307086285|ref|ZP_07495398.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu012] gi|313660488|ref|ZP_07817368.1| hypothetical protein MtubKV_18790 [Mycobacterium tuberculosis KZN V2475] gi|2924438|emb|CAA17738.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE4A [Mycobacterium tuberculosis H37Rv] gi|31620274|emb|CAD95717.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE4A [Mycobacterium bovis AF2122/97] gi|121495068|emb|CAL73554.1| Conserved hypothetical integral membrane protein yrbE4A [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124599616|gb|EAY58720.1| hypothetical integral membrane protein yrbE4A [Mycobacterium tuberculosis C] gi|134152356|gb|EBA44401.1| hypothetical integral membrane protein yrbE4A [Mycobacterium tuberculosis str. Haarlem] gi|148507517|gb|ABQ75326.1| conserved hypothetical integral membrane protein YrbE4a [Mycobacterium tuberculosis H37Ra] gi|148723235|gb|ABR07860.1| hypothetical integral membrane protein yrbE4A [Mycobacterium tuberculosis F11] gi|224775031|dbj|BAH27837.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253322046|gb|ACT26649.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis KZN 1435] gi|289418017|gb|EFD15257.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis T46] gi|289422161|gb|EFD19362.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis CPHL_A] gi|289440399|gb|EFD22892.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis KZN 605] gi|289540666|gb|EFD45244.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis K85] gi|289545488|gb|EFD49136.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis T17] gi|289687865|gb|EFD55353.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis 02_1987] gi|289692809|gb|EFD60238.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis T92] gi|289696218|gb|EFD63647.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis EAS054] gi|289711187|gb|EFD75203.1| hypothetical integral membrane protein yrbE4A [Mycobacterium tuberculosis GM 1503] gi|289715224|gb|EFD79236.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|298496775|gb|EFI32069.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308213831|gb|EFO73230.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu001] gi|308324772|gb|EFP13623.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu002] gi|308329036|gb|EFP17887.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu003] gi|308332875|gb|EFP21726.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu004] gi|308336458|gb|EFP25309.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu005] gi|308340336|gb|EFP29187.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu006] gi|308344191|gb|EFP33042.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu007] gi|308348121|gb|EFP36972.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu008] gi|308352885|gb|EFP41736.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu009] gi|308356698|gb|EFP45549.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu010] gi|308360652|gb|EFP49503.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu011] gi|308364269|gb|EFP53120.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu012] gi|323717843|gb|EGB27034.1| hypothetical protein TMMG_03675 [Mycobacterium tuberculosis CDC1551A] gi|326905343|gb|EGE52276.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis W-148] gi|328460274|gb|AEB05697.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis KZN 4207] gi|328864220|gb|AEB53193.1| conserved integral membrane protein YRBE4A [Mycobacterium tuberculosis] Length = 254 Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 97/243 (39%), Gaps = 4/243 (1%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + + + ++F+ FL Q + V + +L+S ++A Sbjct: 9 ARAVGGFFEMSMDTARAAFRRPFQFREFL----DQTWMVARVSLVPTLLVSIPFTVLVAF 64 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 L + GA S + + ++G ++T +++AG +AI A++G+ I EEIDA+ Sbjct: 65 TLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAM 124 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R +G+D ++ L+ PR+ A + LL L + G + F + Sbjct: 125 RVLGIDPIQRLVVPRVLASTLVALLLNGLVCAIGLSGGYAFSVFLQGVNPGAFINGLTVL 184 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L + IKA G+V G V +G V VV + + +I+ + Sbjct: 185 TGLRELILAEIKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVM 244 Query: 365 AIF 367 Sbjct: 245 TAI 247 >gi|226305213|ref|YP_002765171.1| YrbE family protein [Rhodococcus erythropolis PR4] gi|229490562|ref|ZP_04384400.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] gi|226184328|dbj|BAH32432.1| putative YrbE family protein [Rhodococcus erythropolis PR4] gi|229322382|gb|EEN88165.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] Length = 286 Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats. Identities = 51/272 (18%), Positives = 115/272 (42%), Gaps = 9/272 (3%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 + F + + V ++ + Q I+ T ++++ L L+ ++ Sbjct: 5 RGRGDQFLLKSRKVARIPVNALDRAGEQMSFYARAIAWTPRTL---HRYRKETLRLLAEV 61 Query: 161 YY------VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 + V + V+ ++S TG V+ QG L Q G+ + + L + + REI + Sbjct: 62 TFGSGALAVIGGTIGVIAMMSGFTGVVVGLQGFAALEQLGSSVLTGFLSAYVNTREIAPI 121 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 + A+ ++ G A++G+M+I+EEIDA+ M + V L++ R+ A +++ L I+ Sbjct: 122 VAALALSATVGCGFTAQLGAMRISEEIDALEVMAVPSVPFLVTTRMIAGFVAVIPLYIVG 181 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 +A + + ++ + + F+ ++ K A + ++ GF Sbjct: 182 LLAAYLASRVISTVFNGQSTGSYDHYFNLFLPPQDVLYSFAKVLVFAFVLILIHCYYGFH 241 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 +G V V +I + ++D ++ Sbjct: 242 ASGGPAGVGVAVGRAVRAAIVTIAVLDFFLSL 273 >gi|120406152|ref|YP_955981.1| hypothetical protein Mvan_5204 [Mycobacterium vanbaalenii PYR-1] gi|119958970|gb|ABM15975.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 237 Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats. Identities = 49/234 (20%), Positives = 96/234 (41%), Gaps = 4/234 (1%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 + + + ++F+ FL Q + + + +L++ ++A L + Sbjct: 1 MSLDTFVKTFRRPFQFREFL----EQTWMIARVSLVPTLLVAIPFTVLVAFTLNILLREI 56 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 GA S + + ++G ++T +++AG +AI A++G+ I EEIDA+R +G+D ++ Sbjct: 57 GAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQ 116 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 L+ PR+ A LL L + G + + F + L + Sbjct: 117 RLVVPRVLASTFVALLLNGLVCLIGLSGGYVFSVFLQGVNPGAFINGLTVLTGLGELVLA 176 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 IKA G+V G V +G V VV + + +I+ + Sbjct: 177 EIKALLFGVVAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVIMTAV 230 >gi|269124785|ref|YP_003298155.1| hypothetical protein Tcur_0520 [Thermomonospora curvata DSM 43183] gi|268309743|gb|ACY96117.1| protein of unknown function DUF140 [Thermomonospora curvata DSM 43183] Length = 262 Score = 176 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 56/243 (23%), Positives = 110/243 (45%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + +G + E ++ + + + Q +++ VIL++ GA +A Q Sbjct: 12 GLLNQVGELFVVALEGLRRTWDVRTWFWEFVEQCWFLARVTSIPVILVALPLGATVALQV 71 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 +Q GA+ + + + +RE+ + A++IAG GSA+ A++G+ +I +E+DA+ Sbjct: 72 GQVAAQLGAQSATGGAVIVGLVREVAPIAAAMIIAGAGGSAMTADMGTRRIRDELDAMEV 131 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 M ++ + L++PR+WA + LL L S G + D+ +F S Sbjct: 132 MAINPIHRLVTPRLWAASLISTLLVSLVVLSGAAGGFVFNVLLQDVTPGAYFDGATSLLQ 191 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 +++ L+KA GIVA G +G+ V +V + +V ++ + Sbjct: 192 TSDLVVTLLKAWLFGMIAGIVACYMGMNCASTPVGVGRAVNQAIVVAFLLVFALNYVITT 251 Query: 367 FYF 369 YF Sbjct: 252 VYF 254 >gi|42523258|ref|NP_968638.1| ABC transporter permease protein [Bdellovibrio bacteriovorus HD100] gi|39575463|emb|CAE79631.1| ABC transporter permease protein [Bdellovibrio bacteriovorus HD100] Length = 274 Score = 176 bits (448), Expect = 4e-42, Method: Composition-based stats. Identities = 64/264 (24%), Positives = 129/264 (48%), Gaps = 2/264 (0%) Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 S +G+ + K + + ++ L + T + F+ + + Q+Y+ G Sbjct: 3 SLLAQIDSLGRSVTKNLEYTARVLLMVYLSLRAT--ILDRAQGFRQIVGVISAQIYFTGW 60 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 +P++ +++ TG++I Q LS G + + ++ +RE G LL A+++ RSG Sbjct: 61 QALPLISVLALGTGSIILLQSLSNLSLLGGTQMIGNFLIVMIVREAGPLLVALVVIARSG 120 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 +A+ +E+G+M+ N EI+A+ +MG++ + ++ PR+ IIS+ L NF A+IG +V Sbjct: 121 TAVASEVGNMRANREIEALESMGINPLSFIVFPRVLGGIISVLGLAFYFNFIALIGGFLV 180 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 D+P A + ++ L+K F I +V +G +V + + + Sbjct: 181 TKFVQDLPLAFYTDSLMRAFAKEDVLIFLLKNGFSGMIIFVVCCYQGLSVKRSPHEVPQV 240 Query: 346 VTTCVVQSISIVIIIDSLFAIFYF 369 T VV SI V++ + + ++ Sbjct: 241 TTQAVVNSIIFVVVFNLIVTALFY 264 >gi|91215158|ref|ZP_01252130.1| hypothetical protein P700755_12712 [Psychroflexus torquis ATCC 700755] gi|91186763|gb|EAS73134.1| hypothetical protein P700755_12712 [Psychroflexus torquis ATCC 700755] Length = 247 Score = 176 bits (448), Expect = 4e-42, Method: Composition-based stats. Identities = 56/245 (22%), Positives = 105/245 (42%), Gaps = 2/245 (0%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + +G E K +++++ + +S + +V+ ISF GAVIA Q Sbjct: 4 NYIKSIGQYFIMIYETFRKMTKTSELKRLILQELDDLIISSLGIVVFISFFIGAVIAIQT 63 Query: 187 AFQLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A S F + + E A+++AG+ GS I + IG+M+++E+IDA+ Sbjct: 64 ALNFSNPFVPKSLIGFAARQSIILEFAPTFVAIIMAGKVGSYITSSIGTMRVSEQIDALE 123 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MG++ + L+ P+I A+ P + ++ F IIGA + F + Sbjct: 124 VMGINSLNYLVFPKIIAMC-MFPFVIAISMFVGIIGAYTASVYGGFLSSEQFLAGLQEDF 182 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 +F +K+ A + V G+ + S +G+ TT V + I+I ++ Sbjct: 183 IPFQVFYAFLKSFVFAIILATVPAFHGYYMKGGSLEVGRAATTSFVWTSVIIIFMNYFIT 242 Query: 366 IFYFA 370 + Sbjct: 243 QLLLS 247 >gi|319950492|ref|ZP_08024405.1| putative YrbE family protein [Dietzia cinnamea P4] gi|319435851|gb|EFV91058.1| putative YrbE family protein [Dietzia cinnamea P4] Length = 285 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 52/265 (19%), Positives = 110/265 (41%), Gaps = 6/265 (2%) Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGV 165 + + +N S L + + ++ +L LI ++ + V Sbjct: 12 ARLRALVRGPVNSFDSLGDQLAFHLRAIRWIPQTIVHYRHEVLRLIAEVTFGVGTLAVLG 71 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 + V++++S TG V+ QG L Q G+ + + L + + RE+ ++ ++ ++ G Sbjct: 72 GTIGVIVMMSGFTGVVVGLQGYAALDQIGSSVLTGFLSAYVNTREVAPVVASLALSATVG 131 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 A++G+M+I+EEIDA+ M + V L++ R+ A I++ L ++ S+ + V Sbjct: 132 CGFTAQLGAMRISEEIDALEVMAIPSVPYLVTTRVIAGFIAVIPLYVVGLLSSYLATRGV 191 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 F FH ++ IK A + ++ G+ +G Sbjct: 192 NTMIQGQSTGSFDHYFHLFLPPEDVIYSFIKVIIFAFVLVMIHCYYGYTASGGPAGVGVA 251 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 V V +I +V I++ + + Sbjct: 252 VGRAVRTTIVVVAILNFFVGLALWG 276 >gi|120401520|ref|YP_951349.1| hypothetical protein Mvan_0498 [Mycobacterium vanbaalenii PYR-1] gi|119954338|gb|ABM11343.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 269 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 54/243 (22%), Positives = 114/243 (46%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 I+G + + T + + +K + Q ++V + + +S + + Sbjct: 25 LSIIGGLYAMTLDMFVAMFKPPFQWREFLLQTWFVARVSMVPALTLSIPLVVLTSFTFNT 84 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L +FGA FS ++ + +IG +T +++AG SA+ A++GS I EE+DA+R +G Sbjct: 85 LLGEFGAADFSGTGAALGAVNQIGPFVTVLVVAGAGASAMCADLGSRTIREEVDAMRVLG 144 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD + L+ PR+ A + LL+ + + ++GA + + + F + L Sbjct: 145 LDPIHSLVVPRVLATTLVAVLLSSVVTVTGLLGAFLFSVYFQHVTPGSFVASMTLITGLG 204 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 ++ L+KA G++A +G V + +G V+ VV + ++ +++++ Sbjct: 205 DVLVSLVKATLFGFVAGLIACYQGLRVQKGAAGVGNAVSETVVIAFLLLFVVNAIVTAVG 264 Query: 369 FAI 371 F + Sbjct: 265 FEV 267 >gi|254818557|ref|ZP_05223558.1| hypothetical protein MintA_01474 [Mycobacterium intracellulare ATCC 13950] Length = 289 Score = 176 bits (447), Expect = 5e-42, Method: Composition-based stats. Identities = 57/255 (22%), Positives = 111/255 (43%), Gaps = 4/255 (1%) Query: 121 FINDSCSQAHILG----LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + + LG L + + + +RQ ++ + V +L++ Sbjct: 29 VVRHPLASLNTLGEQYILAVRTVEYCMVDLFTGRFQWAEFVRQGAFMAATAVLPTVLVAL 88 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G ++ Q A +Q GA + + +R+ L+ AV++A GSAI A++GS Sbjct: 89 PIGVTLSIQFALLANQVGATSLAGAASGLAVIRQAASLVAAVLMASAVGSAITADLGSRT 148 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 + EE DA+ MG+ +R L+ PR A I+ LT + F + + + + Sbjct: 149 MREETDAMEVMGVSVIRRLVVPRFAAAIMVGVALTGITCFVGFLASYLFNVYFQRGAPGS 208 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 F + F S AT ++ L+KA + ++A ++G + V VV+SI + Sbjct: 209 FVATFSSFATTEDMIVALLKAVIYGAIVAVIACQKGLFTKGGPAGVANSVNAAVVESILV 268 Query: 357 VIIIDSLFAIFYFAI 371 ++I++ + Y + Sbjct: 269 LMIVNVGISQLYNTL 283 >gi|296166535|ref|ZP_06848966.1| membrane protein YrbE4A [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898147|gb|EFG77722.1| membrane protein YrbE4A [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 254 Score = 176 bits (447), Expect = 5e-42, Method: Composition-based stats. Identities = 50/239 (20%), Positives = 97/239 (40%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 A +G + ++++ L + Q + + + +L+S ++A Sbjct: 9 ARAVGGFFEMMIDTGRATFRRPFQLGEFLEQTWMIARVSLVPTLLVSIPFTVLVAFTLNI 68 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L + GA S + + ++G ++T +++AG +AI A++G+ I EEIDA+R +G Sbjct: 69 LLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLG 128 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 +D V L+ PR+ A + LL L + G + + F + L Sbjct: 129 IDPVHRLVVPRVLASTVVALLLNGLVCAIGLSGGYVFSVFLQGVNPGAFINGLTVLTGLR 188 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + +KA G+V G V +G V VV + + +I+ + Sbjct: 189 ELVLAEVKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVMTAI 247 >gi|300783702|ref|YP_003763993.1| ABC transporter permease [Amycolatopsis mediterranei U32] gi|299793216|gb|ADJ43591.1| ABC transport system permease protein [Amycolatopsis mediterranei U32] Length = 283 Score = 176 bits (447), Expect = 5e-42, Method: Composition-based stats. Identities = 47/260 (18%), Positives = 107/260 (41%), Gaps = 10/260 (3%) Query: 117 KIVKFINDSCSQAHILG-LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG-------- 167 ++ + ++ LG ++ + + +L ++R + V Sbjct: 11 RVREAVDRRFGFLDTLGDQILFFIRAIAWTPRALRRYLREVVRLLAEVSFGSGALAVIGG 70 Query: 168 -VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + V+I ++ TG V+ QG L+Q G F+ + + REI L++ + ++ G Sbjct: 71 TIGVMIGMTVATGTVVGLQGYSALNQVGTSAFAGFVSAYFNTREIAPLVSGLALSATVGC 130 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A++G+M+I+EEIDA+ MG+ V L++ R+ A +++ L + S+ + + + Sbjct: 131 GFTAQLGAMRISEEIDALEVMGIPSVPYLVTTRVIAGFLAVIPLYAIGLLSSYLASRQIT 190 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 ++ + F ++ K + + + GF +G V Sbjct: 191 VWFFGQSAGTYDHYFLLFLPPGDVLWSFGKVLVFSIVVVLAHCYYGFRASGGPAGVGVAV 250 Query: 347 TTCVVQSISIVIIIDSLFAI 366 V +I + ++D ++ Sbjct: 251 GRAVRTAIVAISVLDFFLSL 270 >gi|134098921|ref|YP_001104582.1| putative ABC transport system permease protein [Saccharopolyspora erythraea NRRL 2338] gi|291009385|ref|ZP_06567358.1| putative ABC transport system permease protein [Saccharopolyspora erythraea NRRL 2338] gi|133911544|emb|CAM01657.1| putative ABC transport system permease protein [Saccharopolyspora erythraea NRRL 2338] Length = 279 Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 108/266 (40%), Gaps = 10/266 (3%) Query: 111 HYHIGKKIVKFINDSCSQAHILG-LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG-- 167 IG++ + + LG ++ A+ + +L ++R + V Sbjct: 1 MIGIGQRARTVLRRPGDTLYNLGDQLLFYLYALGAAPLAVRRYLREVVRLLAEVTFGSGA 60 Query: 168 -------VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 + V++ + TG + QG L+Q G + + + REI L+ + + Sbjct: 61 LAVIGGTIGVILGMCVFTGVTVGLQGFSALNQIGISTLTGFMTAYFNTREIAPLVAGLAL 120 Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280 + G+ A++G+M+I+EEIDA+ M + + L++ RI A +++ L ++ ++ + Sbjct: 121 SATVGAGFTAQLGAMRISEEIDALEVMAVRSLPYLVTTRIVAGFVAVVPLYVIGLLTSYV 180 Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 + V ++ + F ++ K + A+ + G+ Sbjct: 181 ASRQVTVWFFGQSGGTYDHYFSLFLPPVDVLWSFGKVLVFSVAVILTHCFYGYRAAGGPA 240 Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAI 366 +G V V SI ++ ++D ++ Sbjct: 241 GVGVAVGRAVRTSIVLISVLDLFLSL 266 >gi|108798619|ref|YP_638816.1| hypothetical protein Mmcs_1650 [Mycobacterium sp. MCS] gi|119867717|ref|YP_937669.1| hypothetical protein Mkms_1676 [Mycobacterium sp. KMS] gi|126434218|ref|YP_001069909.1| hypothetical protein Mjls_1625 [Mycobacterium sp. JLS] gi|108769038|gb|ABG07760.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119693806|gb|ABL90879.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] gi|126234018|gb|ABN97418.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 266 Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats. Identities = 54/243 (22%), Positives = 114/243 (46%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 I+G + + T + + +K + Q ++V + + +S + + Sbjct: 22 LSIIGGLYAMTLDMFVAMFKPPFQWREFLLQTWFVARVSMVPALTLSIPLVVLTSFTFNT 81 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L +FGA FS ++ + +IG +T +++AG SA+ A++GS I EE+DA+R +G Sbjct: 82 LLGEFGAADFSGTGAALGAVNQIGPFVTVLVVAGAGASAMCADLGSRTIREEVDAMRVLG 141 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD + L+ PR+ A + LL+ + + ++GA + + + F + L Sbjct: 142 LDPIHSLVVPRVLATTLVAVLLSSVVTVTGLLGAFLFSVYFQHVTPGSFVASMTLITGLG 201 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 ++ L+KA G++A +G V + +G V+ VV + ++ +++++ Sbjct: 202 DVLVSLVKATLFGFVAGLIACYQGLRVQKGAAGVGNAVSETVVIAFLLLFVVNAIVTAVG 261 Query: 369 FAI 371 F + Sbjct: 262 FEV 264 >gi|328880857|emb|CCA54096.1| toluene tolerance protein [Streptomyces venezuelae ATCC 10712] Length = 268 Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 102/246 (41%), Gaps = 9/246 (3%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVIAQ 184 ++ + +L + R + V + V++ ++ TG V+ Sbjct: 14 QLLFYVKALLWIPRTLRRYLKEVQRLLAEVAFGSGGLGVIGGTIGVMVAMTLFTGTVVGL 73 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L Q G F+ + + REI L+ + ++ G+ A++G+M+INEE+DA+ Sbjct: 74 QGYAALEQIGTAAFTGFVSAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVDAL 133 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ + L++ RI A ++++ L + S+ + + V + + F+ Sbjct: 134 EGMGIRSMPYLVTTRIIAGVVAIVPLYAIGLLSSYLASRYVTVLFNGQSQGTYDHYFNLF 193 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + ++ ++K + + I GF +G V V +I ++ + D Sbjct: 194 LSPTDVLLSVLKVLIFSVMVIIAHCYYGFRASGGPAGVGIAVGRSVRNAIVLISVTDFFL 253 Query: 365 AIFYFA 370 ++ + Sbjct: 254 SLALWG 259 >gi|325286981|ref|YP_004262771.1| hypothetical protein Celly_2079 [Cellulophaga lytica DSM 7489] gi|324322435|gb|ADY29900.1| protein of unknown function DUF140 [Cellulophaga lytica DSM 7489] Length = 260 Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats. Identities = 53/246 (21%), Positives = 101/246 (41%), Gaps = 2/246 (0%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + +G E K+ +++++ + + ++I ISF G V+ Q Sbjct: 16 MNYIASIGSYFIMIKEVFKKPTKWSIMKKLILKEIDELVFGSLGIIIFISFFIGGVVTIQ 75 Query: 186 GAFQLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 A L+ E + E T++++AG+ GS I + IG+M++ E+IDA+ Sbjct: 76 TALNLTNPLIPESLIGFAARQSVILEFAPTFTSIIMAGKVGSYITSSIGTMRVTEQIDAL 135 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG++ + L+ P+I AL++ P +A + I G I A F Sbjct: 136 EVMGVNSLNYLVFPKIIALLL-YPFAIAIAMYVGIFGGWIAGVFGGFTTSASFIEGIQLD 194 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++ IK+ A I + G+ + + +GK TT V + +II++ + Sbjct: 195 FIPYHVTYAFIKSIIFAFVIATIPSFHGYYMKGGALEVGKASTTAFVWTSVAIIILNYIL 254 Query: 365 AIFYFA 370 Sbjct: 255 TQLLLG 260 >gi|315185558|gb|EFU19327.1| protein of unknown function DUF140 [Spirochaeta thermophila DSM 6578] Length = 263 Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats. Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 2/262 (0%) Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167 ++ +G + + +D + VI T F + L+ Q+ + GV Sbjct: 3 GDILSSLGNRAITRTHDILYGIGYVATVIKETVLFFRK--RRGEAGRVLVLQILFTGVEA 60 Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 + V+ L++ GA+I QG L QFG ++ + RE+G +LTA ++ RSG+A Sbjct: 61 LNVIALLALGIGALIIIQGVSLLPQFGQGDLVYPILIAVITRELGPILTAFIVTARSGTA 120 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I EIG+M ++ EI+A G+D + L+ PR I+++ LL + N ++G+ V Sbjct: 121 IATEIGTMVVSHEIEAYMAFGIDPISYLVVPRFLGAIVAVTLLNVYFNIFGLLGSFFVTS 180 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + I FA +F +I + L+K+ I +V GF V S + + Sbjct: 181 LIHPIQFAEYFHNLLLRLKPVDILSSLVKSATFGAVIALVGTYSGFQVERASTEIPQVAI 240 Query: 348 TCVVQSISIVIIIDSLFAIFYF 369 V + I+ D+L + Y+ Sbjct: 241 KAVGKGFVYCIVADALLTLVYY 262 >gi|254773146|ref|ZP_05214662.1| hypothetical protein MaviaA2_00471 [Mycobacterium avium subsp. avium ATCC 25291] Length = 289 Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats. Identities = 57/255 (22%), Positives = 111/255 (43%), Gaps = 4/255 (1%) Query: 121 FINDSCSQAHILG----LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + + LG L + + + +RQ ++ + V +L++ Sbjct: 29 VVRHPLASLNTLGEQYILAVRTVEYCVVDLFTGRFQWAEFVRQGAFMAATAVLPTVLVAL 88 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G ++ Q A +Q GA + + +R+ L+ AV++A GSAI A++GS Sbjct: 89 PIGVTLSIQFALLANQVGATSLAGAASGLAVIRQAASLVAAVLMASAVGSAITADLGSRT 148 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 + EE DA+ MG+ +R L+ PR A I+ LT + F + + + + Sbjct: 149 MREETDAMEVMGVSVIRRLVVPRFAAAIMVGVALTGITCFVGFLASYLFNVYFQRGAPGS 208 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 F + F S AT ++ L+KA + ++A ++G + V VV+SI + Sbjct: 209 FVATFSSFATTEDMIVALLKAVIYGAIVAVIACQKGLFTKGGPAGVANSVNAAVVESILV 268 Query: 357 VIIIDSLFAIFYFAI 371 ++I++ + Y + Sbjct: 269 LMIVNVGISELYNTL 283 >gi|307718422|ref|YP_003873954.1| transporter [Spirochaeta thermophila DSM 6192] gi|306532147|gb|ADN01681.1| putative transporter [Spirochaeta thermophila DSM 6192] Length = 263 Score = 176 bits (446), Expect = 7e-42, Method: Composition-based stats. Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 2/262 (0%) Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167 ++ +G + + +D + VI T F + L+ Q+ + GV Sbjct: 3 GDILSSLGNRAIARTHDILYGIGYVATVIKETVLFFRK--RRGEAGRVLVLQILFTGVEA 60 Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 + V+ L++ GA+I QG L QFG ++ + RE+G +LTA ++ RSG+A Sbjct: 61 LNVIALLALGIGALIIIQGVSLLPQFGQGDLVYPILIAVITRELGPILTAFIVTARSGTA 120 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I EIG+M ++ EI+A G+D + L+ PR I+++ LL + N ++G+ V Sbjct: 121 IATEIGTMVVSHEIEAYMAFGIDPISYLVVPRFLGAIVAVTLLNVYFNIFGLLGSFFVTS 180 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + I FA +F +I + L+K+ I +V GF V S + + Sbjct: 181 LIHPIQFAEYFHNLLLRLKPVDILSSLVKSATFGAVIALVGTYSGFQVERASTEIPQVAI 240 Query: 348 TCVVQSISIVIIIDSLFAIFYF 369 V + I+ D+L + Y+ Sbjct: 241 KAVGKGFVYCIVADALLTLVYY 262 >gi|332169298|gb|AEE18553.1| protein of unknown function DUF140 [Krokinobacter diaphorus 4H-3-7-5] Length = 245 Score = 175 bits (445), Expect = 7e-42, Method: Composition-based stats. Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 2/246 (0%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 S H +G K K + +++ + + + +V ISF GAV+A Q Sbjct: 1 MSYLHSIGEYFLMIKNTFVKPTKGKVLRDLIFKEIDDLIIGSLGIVAFISFFVGAVVAIQ 60 Query: 186 GAFQLSQFGAE-IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 A L+ + E +V++AG+ GS I + IG+M++ E+IDA+ Sbjct: 61 TALNLNNPLLPKSLIGFAARQSIILEFAPTFVSVIMAGKVGSFITSSIGTMRVTEQIDAL 120 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG++ + L+ P+I A++I P L + F IIGA P F S Sbjct: 121 EVMGINSLNYLVFPKIVAMLI-YPFLIAIGMFLGIIGAYTAAVYGGFAPSNDFLSGLQQD 179 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +F K A + + G+ + + +GK TT V + +I+++ + Sbjct: 180 FIPFQLFYAFFKTFLFAFLLATIPAYHGYYMRGGALEVGKASTTSFVWTSVAIILVNFIT 239 Query: 365 AIFYFA 370 + Sbjct: 240 TQLLLS 245 >gi|326382982|ref|ZP_08204671.1| hypothetical protein SCNU_08596 [Gordonia neofelifaecis NRRL B-59395] gi|326198118|gb|EGD55303.1| hypothetical protein SCNU_08596 [Gordonia neofelifaecis NRRL B-59395] Length = 286 Score = 175 bits (445), Expect = 7e-42, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 109/252 (43%), Gaps = 9/252 (3%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVI 172 +K ++ + Q ++ + + ++ L+ ++ + V V V++ Sbjct: 23 LKLLDGAGEQMSFYARTLAWIPKTLVH---YTREVMRLLAEVAFGSGGLAVIGGTVGVMV 79 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 L+S TG V+ QG L Q G++ + L + + RE+ L+ + ++ G A++ Sbjct: 80 LMSGFTGVVVGMQGYAALDQIGSQALTGFLSAYVNTREVAPLVAGLALSATVGCGFTAQL 139 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 G+M+I+EEIDA+ M + + L+S R+ A I++ L +L +A + + +V + Sbjct: 140 GAMRISEEIDALEVMAVPSIPFLVSSRVIAGFIAVIPLYVLGLMAAYLASRVVNTVFNGQ 199 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 + F+ ++ K A I ++ G+ +G V V Sbjct: 200 STGSYDHYFNLFLPPVDVLWSFGKVLIFAFVIILIHCYYGYFASGGPAGVGVAVGHAVRT 259 Query: 353 SISIVIIIDSLF 364 ++ ++ ++D Sbjct: 260 ALVLIAVMDFFL 271 >gi|150025444|ref|YP_001296270.1| ABC transporter permease [Flavobacterium psychrophilum JIP02/86] gi|149771985|emb|CAL43461.1| Probable ABC-type transport system, permease component [Flavobacterium psychrophilum JIP02/86] Length = 248 Score = 175 bits (445), Expect = 9e-42, Method: Composition-based stats. Identities = 51/246 (20%), Positives = 101/246 (41%), Gaps = 2/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G E K+ + +++ + + + +V ISF G V+A Sbjct: 3 LLRYLSQIGRYFLMIVEIFKKPTKWSVMRTLIFKEIDDLIIGSLGIVAFISFFVGGVVAI 62 Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q A L+ + + E ++++AG+ GS I + IG+M++ E+IDA Sbjct: 63 QTALNLTNPLIPKYLIGFATRQSIILEFAPTFISIIMAGKMGSFITSSIGTMRVTEQIDA 122 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ + L+ P++ AL++ P L +A F I+G I A F + Sbjct: 123 LEVMGVNSLNYLVFPKLIALLL-YPFLIGIAMFLGILGGYIASVYGGFGTHADFLNGLQK 181 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +I IK A + + G+ + + +GK T V + ++I+++ + Sbjct: 182 EFIPFHITYAFIKTLIFALILATIPSFHGYYMKGGALEVGKASTVSFVWTSVMIILMNYI 241 Query: 364 FAIFYF 369 Sbjct: 242 LTQLLL 247 >gi|108801582|ref|YP_641779.1| hypothetical protein Mmcs_4619 [Mycobacterium sp. MCS] gi|119870736|ref|YP_940688.1| hypothetical protein Mkms_4707 [Mycobacterium sp. KMS] gi|108772001|gb|ABG10723.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119696825|gb|ABL93898.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] Length = 254 Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats. Identities = 50/243 (20%), Positives = 99/243 (40%), Gaps = 4/243 (1%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + + + I + ++F+ FL Q + + + +L++ ++A Sbjct: 9 ARAVGGFVEMSIDTFVKTFRRPFQFREFL----DQTWMIARVSLIPTLLVAIPFTVLVAF 64 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 L + GA S + + ++G ++T +++AG +AI A++G+ I EEIDA+ Sbjct: 65 TLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAM 124 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R +G+D ++ L+ PR+ A LL L + G + + F + Sbjct: 125 RVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGLAGGYVFSVFLQGVNPGAFINGLTVL 184 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L + IKA G+V G V +G V VV + + +I+ + Sbjct: 185 TGLGELVLAEIKALLFGVVAGLVGCYRGLTVQGGPKGVGIAVNETVVYAFICLFVINVIM 244 Query: 365 AIF 367 Sbjct: 245 TAV 247 >gi|49072908|gb|AAT51759.1| TrnB1 [Mycobacterium vanbaalenii PYR-1] Length = 269 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 53/243 (21%), Positives = 114/243 (46%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 ++G + + T + + +K + Q ++V + + +S + + Sbjct: 25 LSVIGGLYAMTLDMFVAMFKPPFQWREFLLQTWFVARVSMVPALTLSIPLVVLTSFTFNT 84 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L +FGA FS ++ + +IG +T +++AG SA+ A++GS I EE+DA+R +G Sbjct: 85 LLGEFGAADFSGTGAALGAVNQIGPFVTVLVVAGAGASAMCADLGSRTIREEVDAMRVLG 144 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD + L+ PR+ A + LL+ + + ++GA + + + F + L Sbjct: 145 LDPIHSLVVPRVLATTLVAVLLSSVVTVTGLLGAFLFSVYFQHVTPGSFVASMTLITGLG 204 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 ++ L+KA G++A +G V + +G V+ VV + ++ +++++ Sbjct: 205 DVLVSLVKATLFGFVAGLIACYQGLRVQKGAAGVGNAVSETVVIAFLLLFVVNAIVTAVG 264 Query: 369 FAI 371 F + Sbjct: 265 FEV 267 >gi|295690359|ref|YP_003594052.1| hypothetical protein Cseg_2991 [Caulobacter segnis ATCC 21756] gi|295432262|gb|ADG11434.1| protein of unknown function DUF140 [Caulobacter segnis ATCC 21756] Length = 266 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 66/250 (26%), Positives = 115/250 (46%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + +G V G L RQ+ +G +PVV L + Sbjct: 12 IRSLGARATIAVRAVGAVGLFAGRGVICILTPPWRLGHWGRQLTTIGFFSLPVVALTALF 71 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TGA +A + A ++++ RE+G +L A+M+AGR +AI AEIG+M+ Sbjct: 72 TGAALALNIHIGGGRLNAAQAMPQIVALGITRELGPVLAALMLAGRVSAAIAAEIGAMRA 131 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++DA+RT+ D +R L++PR+ A +++LPLLT++A+ + G +V D + Sbjct: 132 TEQLDAMRTLSTDPIRYLVAPRLAAAVLALPLLTLVADIIGVAGGGVVAVGVLDFSAPTY 191 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 T +I +GL+KA + ++ G+ + +G+ T VV + ++ Sbjct: 192 ARAAARFLTGWDIGSGLVKAAVFGFVVALMGCYHGYVATGGARGVGRATTRAVVSAAILI 251 Query: 358 IIIDSLFAIF 367 D L Sbjct: 252 FACDYLLTTL 261 >gi|146298213|ref|YP_001192804.1| hypothetical protein Fjoh_0449 [Flavobacterium johnsoniae UW101] gi|146152631|gb|ABQ03485.1| protein of unknown function DUF140 [Flavobacterium johnsoniae UW101] Length = 248 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 52/247 (21%), Positives = 98/247 (39%), Gaps = 2/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G E K+ + +++ + + + +V ISF G V+A Sbjct: 3 LIRYLSQIGKYFLMLKEIFNKQTKWPVMKNLIFKEIDDLIIDSLGIVCFISFFIGGVVAI 62 Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q A L+ + + E +V++AG+ GS I + IG+M++ E+IDA Sbjct: 63 QTALNLTNPLIPKYLIGFATRQSVVLEFAPTFISVIMAGKMGSYITSSIGTMRVTEQIDA 122 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ V L+ P+I AL + P + ++ F I G + A F Sbjct: 123 LEVMGVNSVNYLVFPKIIAL-LMYPFVIGISMFLGIFGGWLACAYGGFSTGADFIMGAQK 181 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +I IK A + + G+ + + +GK TT V + +I+++ + Sbjct: 182 DFIPFHITYAFIKTLIFAMLLATIPSFHGYYMKGGALEVGKASTTSFVWTSVTIILLNYI 241 Query: 364 FAIFYFA 370 Sbjct: 242 LTQLLLG 248 >gi|118463749|ref|YP_880207.1| TrnB1 protein [Mycobacterium avium 104] gi|118165036|gb|ABK65933.1| TrnB1 protein [Mycobacterium avium 104] Length = 272 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 110/262 (41%), Gaps = 1/262 (0%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + + G ++ D +G + + + + ++ + Q ++V Sbjct: 4 LRAERWSTGLPALRLKVDVSGAMQAVGALFAMSADAVKYLFRRPFQWREFLEQSWFVARV 63 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + +L++ +++ L + GA S + + ++G L+T +++AG + Sbjct: 64 SLAPTLLVAIPFTVLVSFTLNILLRELGAADLSGAGAAFGAVTQLGPLVTVLIVAGAGAT 123 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ A++GS I EEIDA+ +G++ ++ L++PR+ A + LL L ++G + Sbjct: 124 AMCADLGSRTIREEIDAMEVLGINPIQRLVTPRMLASGLVAFLLNSLVVIIGVLGGYVFS 183 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKK 345 D+ F + + + IKA G+VA G + G + ++G Sbjct: 184 VFVQDVNPGAFAAGITLLTGVPEVVISCIKAALFGLIAGLVACYRGLSITGGGAKAVGNA 243 Query: 346 VTTCVVQSISIVIIIDSLFAIF 367 V VV + + +++ + Sbjct: 244 VNETVVYAFMSLFVVNVVVTAI 265 >gi|32141168|ref|NP_733570.1| ABC-transporter integral membrane protein [Streptomyces coelicolor A3(2)] gi|256787959|ref|ZP_05526390.1| ABC-transporter integral membrane protein [Streptomyces lividans TK24] gi|289771846|ref|ZP_06531224.1| ABC-transporter integral membrane protein [Streptomyces lividans TK24] gi|24413768|emb|CAD55305.1| putative ABC-transporter integral membrane protein [Streptomyces coelicolor A3(2)] gi|289702045|gb|EFD69474.1| ABC-transporter integral membrane protein [Streptomyces lividans TK24] Length = 268 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 45/246 (18%), Positives = 102/246 (41%), Gaps = 9/246 (3%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVIAQ 184 ++ + +L + R + V + V+I ++ TG V+ Sbjct: 14 QLLFYVRALLWVPRTLRRYLKEVQRLLAEVAFGSGGLGVIGGTIGVMIAMTLFTGTVVGI 73 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L Q G F+ + + REI L+ + ++ G+ A++G+M+INEE+DA+ Sbjct: 74 QGYAALDQIGTSAFTGFVSAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVDAL 133 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ + L++ RI A ++++ L + S+ + + V + + F+ Sbjct: 134 EGMGIRSMPYLVTTRIIAGVVAIIPLYAIGLLSSFLASRYVTVLFNGQSRGTYDHYFNLF 193 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + ++ ++K + + + G+ +G V V +I ++ + D Sbjct: 194 LSPTDVLLSVLKVLIFSVMVIVAHCYYGYRASGGPAGVGVAVGRSVRNAIVLISVTDFFL 253 Query: 365 AIFYFA 370 ++ + Sbjct: 254 SLALWG 259 >gi|260061863|ref|YP_003194943.1| hypothetical protein RB2501_09685 [Robiginitalea biformata HTCC2501] gi|88785996|gb|EAR17165.1| hypothetical protein RB2501_09685 [Robiginitalea biformata HTCC2501] Length = 245 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 52/246 (21%), Positives = 103/246 (41%), Gaps = 2/246 (0%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + +G E K+ +++++ + + ++I ISF G V+A Q Sbjct: 1 MNYLASIGSYAIMIVETFKKPTKWPIMRSLILKEIDELIYGSMGIIIFISFFIGGVVAIQ 60 Query: 186 GAFQLSQFGAE-IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 A +S + E T++++AG+ GS I + IG+M++ E+IDA+ Sbjct: 61 TALNISNPLIPKNLIGFATRQSVILEFAPTFTSIIMAGKVGSYITSSIGTMRVTEQIDAL 120 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG++ + L+ P+I A+++ P + +A + I+G I A F Sbjct: 121 EVMGVNALNYLVFPKIIAMLL-YPFVVAIAMYVGILGGWIAGVFGGFSSSADFIEGLQLD 179 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++ IK+ A I V GF + + +GK T V + ++I+++ + Sbjct: 180 FIPFHVMYSFIKSVVFAFIIATVPSYHGFYMKGGALEVGKASTVSFVWTSVVIIVMNYIL 239 Query: 365 AIFYFA 370 Sbjct: 240 TQLLLG 245 >gi|326799081|ref|YP_004316900.1| hypothetical protein Sph21_1668 [Sphingobacterium sp. 21] gi|326549845|gb|ADZ78230.1| protein of unknown function DUF140 [Sphingobacterium sp. 21] Length = 244 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 63/243 (25%), Positives = 108/243 (44%), Gaps = 1/243 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 G + K + ++ +M +GV + ++ +IS GAV+ Q A Sbjct: 2 FFTSFGKYLLLLKSVFKKPEKASIYWKEIMHEMNSIGVGSLGLIAIISTFIGAVMTMQIA 61 Query: 188 FQL-SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 FQL S + + E+ ++A+++AG+ GS+I ++IGSM++ E+IDA+ Sbjct: 62 FQLVSDLIPNSIIGQINRDSSILELSPTISALVLAGKVGSSISSQIGSMRVTEQIDALEI 121 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG++ LI P+I A I +P+L IL+ F A+ G I + A + Sbjct: 122 MGINAPGYLILPKILAGITMVPVLVILSIFLALSGGLIGGALSGAVTPADYIMGITGDFN 181 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + L+KA I VA GF V + +G+ T VV S +++ D + Sbjct: 182 GYTVAVALVKAFVFGFVITSVAAYHGFYVKGGALEVGQASTKSVVVSCIMILATDYVITA 241 Query: 367 FYF 369 Sbjct: 242 LML 244 >gi|326383821|ref|ZP_08205506.1| YrbE family protein [Gordonia neofelifaecis NRRL B-59395] gi|326197585|gb|EGD54774.1| YrbE family protein [Gordonia neofelifaecis NRRL B-59395] Length = 258 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 59/247 (23%), Positives = 112/247 (45%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + H LG + G + +F+ L + Q ++G +L+ G IA Sbjct: 5 AVEAGHTLGFALQAIGSLFVAIARFRLSLSETLNQTVFIGRVSTGPSLLLMIPVGVFIAV 64 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 + GA +S +++ + + + L+ A+M+AG +GSAI ++GS KI EEIDA+ Sbjct: 65 SVGELAGRIGAGGYSGAVVAFIIVGQASSLVCALMMAGVAGSAICTDLGSRKIREEIDAM 124 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG++ + L++PRI A II +L L + + + +P F + F Sbjct: 125 EVMGVNILERLVAPRIAAAIIVALVLCSLITVTGVGACFLYHVYVQHLPAGSFMATFSQY 184 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +++ L+K+ A IVA +G + + V VV + ++V + +++ Sbjct: 185 GRMSDFVMALVKSSIFALLATIVACFKGLHARGGPSGVADAVNEAVVIAFALVFVFNTVL 244 Query: 365 AIFYFAI 371 + Y + Sbjct: 245 SQLYAVM 251 >gi|324997539|ref|ZP_08118651.1| hypothetical protein PseP1_02183 [Pseudonocardia sp. P1] Length = 286 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 99/253 (39%), Gaps = 1/253 (0%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + G + + + + ++ Q + ++ ++ ++ V G Sbjct: 26 SLGTQLRNGVSTAGEIFRFSTATIRGFRDVRHYSSEVLHQAGILILTSGLIIWVMQGVMG 85 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V + ++ L Q GA ++S + +RE+ + + A + G +VAE+GSM+I++ Sbjct: 86 TVCGLEASYTLKQIGAPLYSGIFNAYCSIREMAPYMWGYIFAAKVGCGLVAELGSMRISD 145 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY-DIPFAVFF 298 EIDA+ MG+ L+ R+ A +++P L + + +V + + Sbjct: 146 EIDAMEVMGIKARSYLVGTRVIAAWLAIPFLYTVGLGIMYVTMYLVTVVQLGGVSPGGYL 205 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 F + LIK I V GF +G+ ++ ++ ++ Sbjct: 206 YIFWLYQNPLDFLYSLIKVMSFGTTIVFVGCYFGFNATGGPVGVGRNTAKAMMINMVLIH 265 Query: 359 IIDSLFAIFYFAI 371 I+ L ++ + Sbjct: 266 ILGVLGTQLFWGL 278 >gi|41406190|ref|NP_959026.1| hypothetical protein MAP0092 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394538|gb|AAS02409.1| hypothetical protein MAP_0092 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 289 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 57/255 (22%), Positives = 110/255 (43%), Gaps = 4/255 (1%) Query: 121 FINDSCSQAHILG----LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + + LG L + + + +RQ ++ + V +L++ Sbjct: 29 VVRHPLASLNTLGEQYILAVRTVEYCVVDLFTGRFQWAEFVRQGAFMAATAVLPTVLVAL 88 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G ++ Q A +Q GA + + +R+ L+ AV+ A GSAI A++GS Sbjct: 89 PIGVTLSIQFALLANQVGATSLAGAASGLAVIRQAASLVAAVLTASAVGSAITADLGSRT 148 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 + EE DA+ MG+ +R L+ PR A I+ LT + F + + + + Sbjct: 149 MREETDAMEVMGVSVIRRLVVPRFAAAIMVGVALTGITCFVGFLASYLFNVYFQRGAPGS 208 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 F + F S AT ++ L+KA + ++A ++G + V VV+SI + Sbjct: 209 FVATFSSFATTEDMIVALLKAVIYGAIVAVIACQKGLFTKGGPAGVANSVNAAVVESILV 268 Query: 357 VIIIDSLFAIFYFAI 371 ++I++ + Y + Sbjct: 269 LMIVNVGISELYNTL 283 >gi|41406660|ref|NP_959496.1| hypothetical protein MAP0562 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118465663|ref|YP_879935.1| hypothetical protein MAV_0655 [Mycobacterium avium 104] gi|254773611|ref|ZP_05215127.1| hypothetical protein MaviaA2_02900 [Mycobacterium avium subsp. avium ATCC 25291] gi|41395009|gb|AAS02879.1| hypothetical protein MAP_0562 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118166950|gb|ABK67847.1| conserved hypothetical protein [Mycobacterium avium 104] Length = 254 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 50/243 (20%), Positives = 97/243 (39%), Gaps = 4/243 (1%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + ++I ++F FL Q + + + +L+S ++A Sbjct: 9 ARAVGGFFEMMIDTGRAAFRRPFQFGEFL----DQTWMIARVSLVPTLLVSIPFTVLVAF 64 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 L + GA S + + ++G ++T +++AG +AI A++G+ I EEIDA+ Sbjct: 65 TLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAM 124 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R +G+D + L+ PR+ A + LL L + G + + F + Sbjct: 125 RVLGIDPIHRLVVPRVLASTVVALLLNGLVCAIGLSGGYVFSVFLQGVNPGAFINGLTVL 184 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L + +KA G+V G V +G V VV + + +I+ + Sbjct: 185 TGLRELVLAEVKALLFGVMAGMVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVM 244 Query: 365 AIF 367 Sbjct: 245 TAI 247 >gi|315442434|ref|YP_004075313.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|315260737|gb|ADT97478.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 285 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 54/236 (22%), Positives = 105/236 (44%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + F + + +RQ ++ + V +L++ G ++ Q A Q GA Sbjct: 44 VRTLQWFFVDLFTGRFQWQEFVRQGAFMAGTAVLPTVLVALPIGVTLSIQFALLAGQVGA 103 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 + + +R+ L A+++A GSAI A++GS + EE DA+ MG+ +R L Sbjct: 104 TSLAGAASGLAVIRQAASLTAAILMAAAVGSAITADLGSRTMREETDAMEVMGVSVIRRL 163 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PR A I+ LT + F + + + + + F + F S T ++ L+ Sbjct: 164 VVPRFAAAIMIGVALTGVVCFVGFLASYLFNVYFQNGAPGSFVATFASFTTTGDMIVALV 223 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 KA + IV+ ++G + + V VV+SI I+++++ + Y + Sbjct: 224 KAVIFGAIVAIVSCQKGMSTRGGPTGVANSVNAAVVESILILMVVNVAISQLYIML 279 >gi|118469389|ref|YP_885535.1| ABC transporter transmembrane protein [Mycobacterium smegmatis str. MC2 155] gi|118170676|gb|ABK71572.1| ABC-transporter integral membrane protein [Mycobacterium smegmatis str. MC2 155] Length = 289 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 57/236 (24%), Positives = 106/236 (44%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + + + IRQ ++ + V +L++ G ++ Q A Q GA Sbjct: 48 VRTVQYLFTELFTGRFQWQEFIRQGAFMASTAVVPTVLVALPIGVTLSIQFALLAGQVGA 107 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 + + +R+ L AV++A GSAI A++GS K+ EE DA+ MG+ ++ L Sbjct: 108 TSLAGAASGLAVIRQAASLTAAVLMAAAVGSAITADLGSRKMREETDAMEVMGVSVIKRL 167 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PR A I+ LT + F I + + + D F + F S AT ++ LI Sbjct: 168 VVPRFAAAIMIGVALTGVVCFVGFIASFLFNVYFQDGAPGSFVATFASFATTGDMIVALI 227 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 KA + +V+ ++G + + V VV+SI ++++++ + Y + Sbjct: 228 KAVIFGAIVAVVSCQKGLSTVGGPTGVANSVNAAVVESILLLMVVNVAISQLYIML 283 >gi|183984957|ref|YP_001853248.1| membrane protein YrbE4A [Mycobacterium marinum M] gi|183178283|gb|ACC43393.1| conserved membrane protein YrbE4A [Mycobacterium marinum M] Length = 237 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 52/234 (22%), Positives = 95/234 (40%), Gaps = 4/234 (1%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 + I ++F+ FL Q + V + +L+S ++A L + Sbjct: 1 MSIDTARAAFRRPFQFREFL----DQTWMVARVSLVPTLLVSIPFTVLVAFTLNILLREI 56 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 GA S + + ++G ++T +++AG +AI A++G+ I EEIDA+R +G+D ++ Sbjct: 57 GAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQ 116 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 L+ PR+ A + LL L + G + F + L + Sbjct: 117 RLVVPRVLASTVVALLLNGLVCAIGLSGGYAFSVFLQGVNPGAFINGLTVLTGLRELILA 176 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 IKA G+V G V +G V VV + + +I+ + Sbjct: 177 EIKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVMTAI 230 >gi|145221253|ref|YP_001131931.1| hypothetical protein Mflv_0654 [Mycobacterium gilvum PYR-GCK] gi|315441852|ref|YP_004074731.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|145213739|gb|ABP43143.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] gi|315260155|gb|ADT96896.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 269 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 54/243 (22%), Positives = 113/243 (46%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 I+G + + T + + K + Q ++V + + +S + + Sbjct: 25 LSIIGGLYAMTLDMFVAMVKPPFQWREFLLQTWFVARVSMVPALTLSIPLVVLTSFTFNT 84 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L +FGA FS ++ + +IG +T +++AG SA+ A++GS I EE+DA+R +G Sbjct: 85 LLGEFGAADFSGTGAALGAVNQIGPFVTVLVVAGAGASAMCADLGSRTIREEVDAMRVLG 144 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD + L+ PR+ A + LL+ + + ++GA + + + F + L Sbjct: 145 LDPIHSLVVPRVLATTLVAVLLSSVVTVTGLLGAFLFSVYFQHVTPGSFVASMTLITGLG 204 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 ++ L+KA G++A +G V + +G V+ VV + ++ +++++ Sbjct: 205 DVLVSLVKATLFGFVAGLIACYQGLRVQKGAAGVGNAVSETVVIAFLLLFVVNAIVTAVG 264 Query: 369 FAI 371 F + Sbjct: 265 FEV 267 >gi|294086102|ref|YP_003552862.1| hypothetical protein SAR116_2535 [Candidatus Puniceispirillum marinum IMCC1322] gi|292665677|gb|ADE40778.1| Protein of unknown function DUF140 [Candidatus Puniceispirillum marinum IMCC1322] Length = 266 Score = 175 bits (443), Expect = 2e-41, Method: Composition-based stats. Identities = 74/258 (28%), Positives = 134/258 (51%), Gaps = 2/258 (0%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170 IG ++ F+ S + I I + L ++ + G+ +PV Sbjct: 11 LTRIGMPVLNFVAFSGFISQIFATAILLLCSGFRRGQPVR--LRHVVSDIRSSGIDALPV 68 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 VIL++ G +++ QG L FGAE +++ RE L+T +++AGRSGS + + Sbjct: 69 VILMAATIGIMLSIQGVHSLRIFGAESQVTFGLALSIPREFAPLITGIIVAGRSGSQLTS 128 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 +GSM++N E+DA++ MG+ +R +++P + AL+ +LP+L +AN SA AS+ I Sbjct: 129 RVGSMQLNGELDALKVMGISPIRFVVAPALVALLFALPILVAIANVSAFWTASLYIDAVL 188 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 I A +++ + T+ ++ G KA A I ++ + +G V ++ LG T+ V Sbjct: 189 GIAPAAYWADILAVVTITDLIHGFGKAIIFAVLIALIGICKGLRVSGGADRLGAATTSSV 248 Query: 351 VQSISIVIIIDSLFAIFY 368 V I+ +I D++FA+ Sbjct: 249 VSCIAAIIAADAMFALIL 266 >gi|169628107|ref|YP_001701756.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977] gi|169240074|emb|CAM61102.1| Putative YrbE family protein [Mycobacterium abscessus] Length = 285 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 58/236 (24%), Positives = 106/236 (44%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + F + +RQ + + V VIL++ G ++ Q A Q GA Sbjct: 44 VRTIQWFFVDLFTGNFQWQEFVRQGAFQAGTAVVPVILVTLPIGVTLSIQFALLAGQVGA 103 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 + I +R+ L+ A++++ GSAI A++GS + EE DA+ MG+ +R L Sbjct: 104 TSLAGAASGIAIIRQAASLVAALLMSAAVGSAITADLGSRTMREETDAMEVMGVSVIRRL 163 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PR A I+ LT + F +GA + + + F + F + AT ++ LI Sbjct: 164 VVPRFAAAIMIGIALTGVVCFVGFLGAYLFNVYWQNGAPGSFVTTFSAFATPGDMILALI 223 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 KA + +VA ++G + + V VV+SI +++ ++ + Y + Sbjct: 224 KAVIYGAIVAVVACQKGLSTKGGPIGVANSVNAAVVESILLLMTVNLAISQLYIMM 279 >gi|239982860|ref|ZP_04705384.1| ABC-transporter integral membrane protein [Streptomyces albus J1074] gi|291454703|ref|ZP_06594093.1| ABC-transporter integral membrane protein [Streptomyces albus J1074] gi|291357652|gb|EFE84554.1| ABC-transporter integral membrane protein [Streptomyces albus J1074] Length = 268 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 103/246 (41%), Gaps = 9/246 (3%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVIAQ 184 +I A + +L + R + V V V+I ++ TG V+ Sbjct: 14 QLIFYVKALAAIPRTLRRYLKEVQRLLAEVAFGSGGLGVIGGTVGVMIAMTLFTGTVVGL 73 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L Q G F+ + + REI L+ + ++ G+ A++G+M+INEE+DA+ Sbjct: 74 QGYAALDQIGTAAFTGFVSAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVDAL 133 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ + L++ RI A ++++ L + S+ + + + + + F+ Sbjct: 134 EGMGIRSMPYLVTTRIIAGVVAIIPLYAIGLLSSYVASRYITVFFNGQSRGTYDHYFNLF 193 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + ++ ++K + + + GF +G V V +I ++ + D Sbjct: 194 LSPTDVLLSVLKVLIFSVLVILAHCYYGFRAQGGPAGVGVAVGRSVRNAIVLISVTDFFL 253 Query: 365 AIFYFA 370 ++ + Sbjct: 254 SLALWG 259 >gi|15843113|ref|NP_338150.1| hypothetical protein MT3605 [Mycobacterium tuberculosis CDC1551] gi|13883459|gb|AAK47964.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] Length = 237 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 51/234 (21%), Positives = 95/234 (40%), Gaps = 4/234 (1%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 + + ++F+ FL Q + V + +L+S ++A L + Sbjct: 1 MSMDTARAAFRRPFQFREFL----DQTWMVARVSLVPTLLVSIPFTVLVAFTLNILLREI 56 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 GA S + + ++G ++T +++AG +AI A++G+ I EEIDA+R +G+D ++ Sbjct: 57 GAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQ 116 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 L+ PR+ A + LL L + G + F + L + Sbjct: 117 RLVVPRVLASTLVALLLNGLVCAIGLSGGYAFSVFLQGVNPGAFINGLTVLTGLRELILA 176 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 IKA G+V G V +G V VV + + +I+ + Sbjct: 177 EIKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVMTAI 230 >gi|226361938|ref|YP_002779716.1| YrbE family protein [Rhodococcus opacus B4] gi|226240423|dbj|BAH50771.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 267 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 102/251 (40%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 K + + +G GE + K L+ Q +++ + +L++ Sbjct: 9 ATAKIASGVGTGLRAVGGFFELCGETFRAMAKRPFQWRELVLQSWFIVRVALLPTLLVAL 68 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 ++ L +FGA S + + +IG L+T +++AG +AI A++G+ Sbjct: 69 PFTVLVVFTLNILLVEFGAADLSGAGAGLGAVTQIGPLVTVLIVAGAGATAICADLGART 128 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 I EEIDAIR +G+D ++ L+ PR+ A + LL L + G + ++ Sbjct: 129 IREEIDAIRVLGIDPIQRLVVPRVLASMFVAVLLNGLVITIGLTGGFLFSVYIQNVTPGA 188 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 + S L + +KA G+VA G V S+G V VV + Sbjct: 189 YVSSLTFVTGLPEVIISEVKATLFGLIAGLVACHRGLTVKGGPKSVGDAVNETVVYAFMA 248 Query: 357 VIIIDSLFAIF 367 + ++ + Sbjct: 249 LFAVNVVVTAI 259 >gi|239945574|ref|ZP_04697511.1| putative YrbE family protein [Streptomyces roseosporus NRRL 15998] gi|239992041|ref|ZP_04712705.1| putative YrbE family protein [Streptomyces roseosporus NRRL 11379] gi|291449029|ref|ZP_06588419.1| ABC-transporter integral membrane protein [Streptomyces roseosporus NRRL 15998] gi|291351976|gb|EFE78880.1| ABC-transporter integral membrane protein [Streptomyces roseosporus NRRL 15998] Length = 267 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 45/242 (18%), Positives = 101/242 (41%), Gaps = 9/242 (3%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVIAQ 184 + + +L + R + V + V+I ++ TG V+ Sbjct: 13 QLTFYIRTLVWIPRTLRRYLREVQRLLAEVAFGSGGLGVIGGTIGVMIAMTLFTGTVVGL 72 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+Q G F+ + + REI L+ + ++ G+ A++G+M+INEE+DA+ Sbjct: 73 QGYAALNQIGTSAFTGFVSAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVDAL 132 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ + L++ RI A ++++ L + S+ + + + + + F+ Sbjct: 133 EAMGIRSMPYLVTTRIIAGVVAIIPLYAIGLLSSYVASRWITIFFNGQSAGTYDHYFNLF 192 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + ++ ++K + + + GF +G V V +I ++ + D Sbjct: 193 LSPQDVLLSVLKVLIFSVLVILAHCYYGFHATGGPAGVGVAVGRSVRNAIVLISVTDFFL 252 Query: 365 AI 366 ++ Sbjct: 253 SL 254 >gi|126437566|ref|YP_001073257.1| hypothetical protein Mjls_5002 [Mycobacterium sp. JLS] gi|126237366|gb|ABO00767.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 254 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 50/243 (20%), Positives = 99/243 (40%), Gaps = 4/243 (1%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + + + I + ++F+ FL Q + + + +L++ ++A Sbjct: 9 ARAVGGFVDMSIDTFVKMFRRPFQFREFL----DQTWMIARVSLIPTLLVAIPFTVLVAF 64 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 L + GA S + + ++G ++T +++AG +AI A++G+ I EEIDA+ Sbjct: 65 TLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAM 124 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R +G+D ++ L+ PR+ A LL L + G + + F + Sbjct: 125 RVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGLAGGYVFSVFLQGVNPGAFINGLTVL 184 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L + IKA G+V G V +G V VV + + +I+ + Sbjct: 185 TGLGELVLAEIKALLFGVVAGLVGCYRGLTVQGGPKGVGIAVNETVVYAFICLFVINVIM 244 Query: 365 AIF 367 Sbjct: 245 TAV 247 >gi|182434832|ref|YP_001822551.1| putative YrbE family protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326775350|ref|ZP_08234615.1| protein of unknown function DUF140 [Streptomyces cf. griseus XylebKG-1] gi|178463348|dbj|BAG17868.1| putative YrbE family protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326655683|gb|EGE40529.1| protein of unknown function DUF140 [Streptomyces cf. griseus XylebKG-1] Length = 267 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 101/242 (41%), Gaps = 9/242 (3%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVIAQ 184 + + +L + R + V + V++ ++ TG V+ Sbjct: 13 QLTFYVKALVWIPRTLRRYLREVQRLLAEVAFGSGGLGVIGGTIGVMVAMTLFTGTVVGL 72 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+Q G F+ + + REI L+ + ++ G+ A++G+M+INEE+DA+ Sbjct: 73 QGYAALNQIGTSAFTGFISAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVDAL 132 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ + L++ RI A ++++ L + S+ + + + + + F+ Sbjct: 133 EAMGIRSMPYLVTTRIIAGVVAIIPLYAIGLLSSYVASRWITIFFNGQSAGTYDHYFNLF 192 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + ++ ++K + + + GF +G V V +I ++ + D Sbjct: 193 LSPQDVLLSVLKVLIFSVLVILAHCYYGFHATGGPAGVGVAVGRSVRNAIVLISVTDFFL 252 Query: 365 AI 366 ++ Sbjct: 253 SL 254 >gi|119717050|ref|YP_924015.1| hypothetical protein Noca_2826 [Nocardioides sp. JS614] gi|119537711|gb|ABL82328.1| protein of unknown function DUF140 [Nocardioides sp. JS614] Length = 257 Score = 174 bits (441), Expect = 3e-41, Method: Composition-based stats. Identities = 60/239 (25%), Positives = 110/239 (46%) Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G + E + L + Q +++ + IL+S GAVI+ Q Q Sbjct: 13 GEIAVMVVEVTKRMFTRPFQLREFVEQAWFITSVTLMPTILVSIPFGAVISLQVGNLTGQ 72 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 GA+ F+ + +RE + A++IAG +GSAI +++G+ KI EEIDA+ +G+D + Sbjct: 73 LGAQSFAGATAVLAVVREAAPIAAALIIAGAAGSAICSDMGARKIREEIDAMEVLGVDPL 132 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 LI PR+ A + ++ + + I G F S F + A+L +++ Sbjct: 133 ERLIVPRVVATMFVALMINGIVIGAGIGGGYFFTVIVQGGSAGAFLSSFTALASLPDLYI 192 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +IKA IV +G G + +G+ V V+ + ++ ++++ YF + Sbjct: 193 SMIKAVVFGWLAAIVGSYKGLNAGGGPSGVGRAVNESVIVAFMLLFFLNAVITAIYFQV 251 >gi|294632698|ref|ZP_06711257.1| ABC-transporter integral membrane protein [Streptomyces sp. e14] gi|292830479|gb|EFF88829.1| ABC-transporter integral membrane protein [Streptomyces sp. e14] Length = 268 Score = 174 bits (441), Expect = 3e-41, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 102/246 (41%), Gaps = 9/246 (3%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP---------VVILISFVTGAVIAQ 184 +I + +L + R + V V+I ++ TG V+ Sbjct: 14 RMIFYVRAVFWVPRTLRRYLKEVRRLLAEVAFGTGGLGVIGGTIGVMIGMTLFTGTVVGL 73 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L Q G F+ + + REI L++ + ++ G+ A++G+M+INEE+DA+ Sbjct: 74 QGYAALDQIGTAAFTGFVSAYFNTREIAPLVSGLALSATVGAGFTAQLGAMRINEEVDAL 133 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ + L++ RI A ++++ L + S+ + + V + + F+ Sbjct: 134 EAMGIRSLPYLVTTRIIAGVVAIVPLYAIGLLSSYLASRAVTVMFQGQSRGTYDHYFNLF 193 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + ++ ++K + + I G+ +G V V +I ++ + D Sbjct: 194 LSPTDVLLSVLKVLIFSVIVIIAHCYHGYHAHGGPAGVGVAVGRSVRNAIVLIALTDFFL 253 Query: 365 AIFYFA 370 ++ + Sbjct: 254 SLALWG 259 >gi|326333295|ref|ZP_08199542.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] gi|325948939|gb|EGD41032.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] Length = 267 Score = 173 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 107/254 (42%), Gaps = 11/254 (4%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV----VILIS 175 + + Q S+ ++++ ++ L+ ++ +G + + V++I Sbjct: 6 SALRELGEQLAFHARAYSHVPHAF---HRYRKEVVRLLAEVA-MGTGALALIGGTVLVIG 61 Query: 176 FVT---GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 F+T G + Q G S + RE+ ++ + + G+ A+I Sbjct: 62 FLTAASGIEVGLQAYTSFDNIGVSALSGFFSAYFNTREVAPIIAGIALTATVGAGFTAQI 121 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 G+M+++EEIDA+ M + V L++ RI A +I++ L +A + +V+ YD Sbjct: 122 GAMRVSEEIDALEVMAVPPVPYLVTTRIMAGLIAVIPLYAIAVMMCWLATRLVVTVGYDE 181 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 + F + ++F ++K MA + V GF +G+ V V Sbjct: 182 APGTYQHYFDTFLIPGDLFLSMLKVTIMALVVVSVCCYHGFKAAGGPAGVGRAVGRAVRS 241 Query: 353 SISIVIIIDSLFAI 366 ++ ++ +D +F I Sbjct: 242 ALIAIMFVDLIFGI 255 >gi|240168187|ref|ZP_04746846.1| integral membrane protein YrbE1A [Mycobacterium kansasii ATCC 12478] Length = 268 Score = 173 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 101/238 (42%), Gaps = 4/238 (1%) Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 + + ++++ F+L Q +++ + IL+S ++ Sbjct: 27 GFFRMCVLTGKALFRRPFQWREFIL----QCWFIMRVALLPAILVSVPFTVLLIFTLNVL 82 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L+QFGA S +I + ++G +T +++AG +AI A++G+ I EEIDA+ +G+ Sbjct: 83 LAQFGAADLSGAGAAIGAVTQLGPQVTVLVVAGAGSTAICADLGARTIREEIDAMEVLGI 142 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 D + L+ PR+ A + LL L ++G + ++ + + + L Sbjct: 143 DPIHRLVVPRVIAATLIATLLNALVITVGLVGGYLFGVYLQNVSGGAYLATLTTITGLPE 202 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + ++KA G+V G V S LG V VV + + ++ + Sbjct: 203 VVIAMVKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVVALFAVNVVLTTV 260 >gi|297190650|ref|ZP_06908048.1| ABC-transporter integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] gi|197719877|gb|EDY63785.1| ABC-transporter integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] Length = 267 Score = 173 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 47/242 (19%), Positives = 101/242 (41%), Gaps = 9/242 (3%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVIAQ 184 +I + +L + R + V + V+I ++ TG V+ Sbjct: 13 QLIFYVRALLWIPKTLRRYLREVQRLLAEVAFGSGGLGVIGGTIGVMIAMTLFTGTVVGL 72 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+Q G F+ + + REI L+ + ++ G+ A++G+M+INEE+DA+ Sbjct: 73 QGYAALNQIGTSAFTGFISAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVDAL 132 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ + L++ RI A ++++ L + S+ + + V + + F Sbjct: 133 EAMGVRSMPYLVTTRIIAGVVAIVPLYAIGLLSSYLASRWVTVLFNGQSAGTYDHYFALF 192 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + ++ ++K + + + GF +G V V +I ++ + D Sbjct: 193 LSPDDVLLSILKVLIFSVMVILAHCYHGFRASGGPAGVGVAVGRSVRNAIVLISVTDFFL 252 Query: 365 AI 366 ++ Sbjct: 253 SL 254 >gi|332043098|gb|EGI79296.1| protein of unknown function DUF140 [Lacinutrix algicola 5H-3-7-4] Length = 245 Score = 173 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 46/243 (18%), Positives = 97/243 (39%), Gaps = 2/243 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 H +G E K+ +++ + + + + +V I+F G VI Q A Sbjct: 4 LHNIGSYFLMIVEMFRKPTKWSVMKQLILKDIDDLIIGSLGIVAFIAFFVGGVITIQTAL 63 Query: 189 QLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + + + E ++++AG+ GS I + IG+M++ E+IDA+ M Sbjct: 64 NIDNPLIPKYLVGFATRQSIILEFAPTFISIIMAGKVGSFITSSIGTMRVTEQIDALEVM 123 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ + L+ P+ A+++ P + +A F I G F + Sbjct: 124 GINSINYLVFPKFVAMML-YPFVISIAMFLGIFGGLTACVLGGYSSVEDFITGVQIDLIP 182 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ IK A + + G+ + + +G+ TT V + +I+++ L Sbjct: 183 FHVAYAFIKTIIFAFILATIPSYHGYFMKGGALEVGEASTTSFVWTSVAIILLNYLLTQM 242 Query: 368 YFA 370 + Sbjct: 243 LLS 245 >gi|319950491|ref|ZP_08024404.1| putative YrbE family protein [Dietzia cinnamea P4] gi|319435850|gb|EFV91057.1| putative YrbE family protein [Dietzia cinnamea P4] Length = 262 Score = 173 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 57/252 (22%), Positives = 106/252 (42%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + G V + ++ I Q +++ + L++ G Sbjct: 5 DVGGGFRTAVGGAGEVFRLFLDVLRGVFRRPFQFREFIEQSWFIASVTILPSALVAIPFG 64 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 AV+A Q + Q GAE F+ + +++ L+T+++IAG +GSA+ A++G+ I E Sbjct: 65 AVVAMQTGSLVQQLGAEAFTGATGVLAVVQQGAPLVTSLLIAGAAGSAVAADLGARTIRE 124 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DA+R +G+D ++ L+ PR+ +++ LL L + I G + + Sbjct: 125 ELDAMRVLGIDPIQRLVVPRVLGMMLVAVLLNGLVSIVGISGGYVFNIMLQGGTPGAYLM 184 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 F + A L + IKA G+VA G +G V VV + ++ Sbjct: 185 SFGALAQLPDFIMSSIKALIFGLIAGVVASYCGMNPKGGPKGVGDAVNLGVVLTFLLLFF 244 Query: 360 IDSLFAIFYFAI 371 + + Y I Sbjct: 245 ANLILTAMYLQI 256 >gi|296167380|ref|ZP_06849782.1| integral membrane protein YrbE1A [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897324|gb|EFG76928.1| integral membrane protein YrbE1A [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 271 Score = 173 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 100/245 (40%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + + ++G + +++ + Q +++ I++S ++ Sbjct: 19 DQLQTPLTVIGGFFRMCVLTGRALFRWPFQWREFVLQCWFIMRVAFLPTIMVSIPLTVLL 78 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 L+QFGA S +I + ++G L T +++AG +AI A++G+ I EEID Sbjct: 79 IFTLNVLLAQFGAADLSGAGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEID 138 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +G+D + L+ PR+ A + LL L ++G + ++ + + Sbjct: 139 AMEVLGIDPIHRLVVPRVIAATLVATLLNGLVITVGLVGGYLFGVYLQNVSGGAYLATLT 198 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + L + +KA G+V G V S LG V VV + + ++ Sbjct: 199 TITGLPEVVIATVKAAIFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVVALYAVNV 258 Query: 363 LFAIF 367 + Sbjct: 259 VLTTI 263 >gi|254392559|ref|ZP_05007737.1| ABC-transporter integral membrane protein [Streptomyces clavuligerus ATCC 27064] gi|294816013|ref|ZP_06774656.1| ABC-transporter integral membrane protein [Streptomyces clavuligerus ATCC 27064] gi|326444355|ref|ZP_08219089.1| putative YrbE family protein [Streptomyces clavuligerus ATCC 27064] gi|197706224|gb|EDY52036.1| ABC-transporter integral membrane protein [Streptomyces clavuligerus ATCC 27064] gi|294328612|gb|EFG10255.1| ABC-transporter integral membrane protein [Streptomyces clavuligerus ATCC 27064] Length = 267 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 43/241 (17%), Positives = 104/241 (43%), Gaps = 6/241 (2%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS------GVPVVILISFVTGAVIAQQ 185 L + + +++ + L+ ++ + + V++ ++ TG V+ Q Sbjct: 14 LAFYLRALLWIPRTLHRYLREVQRLLAEVAFGSGGLGVIGGTIGVMVAMTLFTGTVVGLQ 73 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 G L+Q G F+ + + REI L+ + ++ G+ A++G+M+INEE+DA+ Sbjct: 74 GYAALNQIGTSAFTGFVSAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVDALE 133 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MG+ + L++ RI A ++++ L + S+ + + + + + F Sbjct: 134 AMGVRSLPYLVTTRIIAGVVAIIPLYAIGLLSSYLASRWITVVFNGQSTGTYDHYFQLFL 193 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + ++ ++K + + + GF +G V V +I ++ + D + Sbjct: 194 SPDDVLLSILKVLIFSVMVILAHCYYGFRAEGGPAGVGVAVGRSVRNAIVLISVTDFFLS 253 Query: 366 I 366 + Sbjct: 254 L 254 >gi|302525040|ref|ZP_07277382.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4] gi|302433935|gb|EFL05751.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4] Length = 272 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 104/259 (40%), Gaps = 10/259 (3%) Query: 118 IVKFINDSCSQAHILG-LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG--------- 167 +++ I+ LG ++ + +L ++R + V Sbjct: 1 MLEAIDRRLGFLDTLGDQILFFLRALGWVPRAVRRYLREIVRLLAEVSFGSGALAVIGGT 60 Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 + V++ ++ TG V+ QG L+Q G F+ + + REI L+ + ++ G Sbjct: 61 IGVMVGMTVATGTVVGLQGYSALNQVGTSAFAGFISAYFNTREIAPLVAGLALSATVGCG 120 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 A++G+M+I+EEIDA+ MG+ V L++ R+ A I++ L + S+ + + V Sbjct: 121 FTAQLGAMRISEEIDALEVMGIPSVPYLVTTRVIAGFIAVIPLYAVGLLSSYLASRQVTV 180 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + F ++ K + + + GF +G V Sbjct: 181 WGFGQSAGTYDHYFLLFLPPGDVLWSFGKVLIFSVVVVLAHCYYGFRASGGPAGVGVAVG 240 Query: 348 TCVVQSISIVIIIDSLFAI 366 V +I + ++D ++ Sbjct: 241 RAVRTAIVAISVLDFFLSL 259 >gi|226304401|ref|YP_002764359.1| YrbE family protein [Rhodococcus erythropolis PR4] gi|226183516|dbj|BAH31620.1| putative YrbE family protein [Rhodococcus erythropolis PR4] Length = 269 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 57/247 (23%), Positives = 110/247 (44%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + +++G + + + + L + Q ++G +L+ G IA Sbjct: 16 ALQGGYLIGFSVQALFGLFTAILRRRLSLHETVTQTLFIGRVSTGPSLLLMIPIGVFIAV 75 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 + GA +S +++ + + + L+ A+M+AG +GSAI ++GS KI EEIDA+ Sbjct: 76 SVGELAGRIGAGGYSGAVVAFIIVGQAAALVCALMMAGVAGSAICTDLGSRKIREEIDAM 135 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+D + L++PR+ A +I L + F +I + +P F + F Sbjct: 136 EVMGIDVIERLVAPRLVAAVIVSLALCSMVTFGGVIACYLYHIYVQHLPAGTFMATFSQY 195 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++ L+KA A +VA +G + V VV + ++V I++++ Sbjct: 196 GRSSDFVMALVKAAIFGLASTLVATFKGLHAKGGPRGVADAVNEAVVIAFALVFIVNTVL 255 Query: 365 AIFYFAI 371 + Y I Sbjct: 256 SALYTVI 262 >gi|254822745|ref|ZP_05227746.1| hypothetical protein MintA_22639 [Mycobacterium intracellulare ATCC 13950] Length = 237 Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 46/224 (20%), Positives = 93/224 (41%) Query: 144 ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203 ++++ + Q + + + +L+S ++A L + GA S Sbjct: 7 RAAFRRPFQFGEFLDQTWMIARVSLVPTLLVSIPFTVLVAFTLNILLREIGAADLSGAGT 66 Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263 + + ++G ++T +++AG +AI A++G+ I EEIDA+R +G+D ++ L+ PR+ A Sbjct: 67 AFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLAS 126 Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323 + LL L + G + + F + L + +KA Sbjct: 127 TVVALLLNGLVCAIGLSGGYVFSVFLQGVNPGAFINGLTVLTGLRELVLAEVKALLFGVM 186 Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 G+V G V +G V VV + + +I+ + Sbjct: 187 AGMVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVMTAI 230 >gi|291298383|ref|YP_003509661.1| hypothetical protein Snas_0857 [Stackebrandtia nassauensis DSM 44728] gi|290567603|gb|ADD40568.1| protein of unknown function DUF140 [Stackebrandtia nassauensis DSM 44728] Length = 262 Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 104/248 (41%), Gaps = 6/248 (2%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVILISFVT 178 S L + + +++ + L+ ++ + V V VV+ ++F T Sbjct: 2 LTSLGTQLQFYVRAIAWMPKAVVRYRKEVARLLGEVSFGAGGLTVVGGTVGVVVFLTFFT 61 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G + QG L+Q G F+ + + REI L+ + ++ G+ A++G+M++N Sbjct: 62 GTEVGLQGYQALNQVGTSAFTGFISAYFNTREIAPLVAGIALSATVGAGFTAQLGAMRVN 121 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE+DA+ MG+ + L++ R+ A + + L +LA S+ + V Y+ + Sbjct: 122 EEVDALEVMGVRSLPYLVTTRMLAGLAACVPLYVLALLSSYVATRGVAIFYFGQSSGTYD 181 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 F + ++ K + + V G+ +G V V +I V Sbjct: 182 HYFSTFLVPGDVLWSFGKVLCFSVIVIGVHCYYGYHASGGPAGVGVAVGRAVRTAIVAVN 241 Query: 359 IIDSLFAI 366 I+D ++ Sbjct: 242 IVDFFVSL 249 >gi|183980441|ref|YP_001848732.1| integral membrane protein YrbE1A [Mycobacterium marinum M] gi|183173767|gb|ACC38877.1| conserved hypothetical integral membrane protein YrbE1A [Mycobacterium marinum M] Length = 267 Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 105/254 (41%), Gaps = 1/254 (0%) Query: 115 GKKIVKFINDSCSQ-AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 G ++ ++ D ++G + ++ LI Q ++V + I+ Sbjct: 6 GPHLMGYLRDQLETPLTMVGGFFRMCVLTGKALFRRPFQWRELILQCWFVMRVALLPTIM 65 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 +S ++ L+QFGA S +I + ++G L T +++AG +AI A++G Sbjct: 66 VSIPLTVLLIFTLNVLLAQFGAADISGAGAAIGAVTQLGPLTTVLVVAGAGSTAICADLG 125 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 + I EEIDA+ +G+D + L+ PR+ A LL L ++G + +I Sbjct: 126 ARTIREEIDAMEVLGIDPIHRLVVPRVIAATFVATLLNALVITVGLVGGYLFGVYLQNIN 185 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 + + + + + ++KA G+V G V S LG V VV Sbjct: 186 GGAYLATLTTITGMPEVTIAMVKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLC 245 Query: 354 ISIVIIIDSLFAIF 367 + + ++ + Sbjct: 246 VVALYAVNVILTTI 259 >gi|325954854|ref|YP_004238514.1| hypothetical protein Weevi_1232 [Weeksella virosa DSM 16922] gi|323437472|gb|ADX67936.1| protein of unknown function DUF140 [Weeksella virosa DSM 16922] Length = 250 Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats. Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 3/226 (1%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + + KFK F +IR++ +G+S + +V IS GAV+A Q A Sbjct: 9 LGRYVLLMTKVFQKPIKFKYFWKLIIREVMDLGMSSLGIVTFISTFMGAVVAIQMAQNFR 68 Query: 192 Q---FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 + + ++ + E + ++++AG+ GS I + IG+M++ E+IDA+ MG Sbjct: 69 GSEIPVPDAYIGYATKVVLVLEFSPTIVSLILAGKVGSYIASSIGTMRVTEQIDALDVMG 128 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ LI P+I A + P L ++ I+G ++ F L Sbjct: 129 INSPNFLILPKIIACVFFFPFLIAISIGFGILGGHLIGVFTKMWAPVDFVQGLQMGMALK 188 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 K A I V G+ V S +G+ TT VV + Sbjct: 189 FYIYTFFKTMVFAFVIATVPAYYGYYVSGGSLEVGRSSTTAVVWTS 234 >gi|169631675|ref|YP_001705324.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977] gi|169243642|emb|CAM64670.1| Putative YrbE family protein [Mycobacterium abscessus] Length = 288 Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats. Identities = 63/275 (22%), Positives = 118/275 (42%), Gaps = 5/275 (1%) Query: 95 NQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGE-FCASSYKFKGFL 153 +P L ++ K V+ + + SQ + + ++ ++ F Sbjct: 9 PARPATPSRDAVSGALKEYVRKHPVQAVETAGSQIVLGVRAMQYMFSDIVHRAFPWREF- 67 Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 I Q ++ S V +L++ G ++ Q A Q GA + + +R+ Sbjct: 68 ---IHQGAFMAGSAVVPTLLVAIPIGVTLSIQFALLAGQVGASSLAGAASGVAIVRQGAS 124 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 L+ AV++A GSAI A++GS + EEIDA+ MG+ +R L+ PR+ A ++ LT Sbjct: 125 LVAAVLMASAVGSAITADLGSRTMREEIDAMEVMGVSVIRRLVVPRVAAAVLVGVGLTGT 184 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 F + + + + F + F S + ++ L+KA + IVA +G Sbjct: 185 TCFVGFLASYLFNVYFQHGAPGSFVATFASFTRVDDLVLALLKAILYGLIVAIVACDKGL 244 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + V VV+SI ++++I+ L + Y Sbjct: 245 TTKGGPAGVANSVNAAVVESILVLMLINVLVSQVY 279 >gi|169631592|ref|YP_001705241.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977] gi|169243559|emb|CAM64587.1| Putative YrbE family protein [Mycobacterium abscessus] Length = 285 Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats. Identities = 59/236 (25%), Positives = 107/236 (45%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + F + + +RQ + + V VIL++ G ++ Q A Q GA Sbjct: 44 VRTLQWFFVDLFTGQFQWQEFVRQGAFQAATAVMPVILVTLPIGVTLSIQFALLAGQVGA 103 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 + I +R+ L+ AV++A GSAI A++GS + EE DA+ MG+ +R L Sbjct: 104 TSLAGAASGIAIIRQAASLVAAVLMASAVGSAITADLGSRTMREETDAMEVMGVSVIRRL 163 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PR A I+ LT + F +GA + + F S F S AT ++ ++ Sbjct: 164 VVPRFAAAIMIAVALTAVVCFVGFLGAYLFNVYWQGGAPGSFVSTFASFATPDDMVLAVL 223 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 KA + +V+ ++G + + V VV+SI ++++++ + Y + Sbjct: 224 KAIIYGAIVAVVSCQKGLSTKGGPIGVANSVNAAVVESILLLMVVNVAISQLYIMM 279 >gi|229494168|ref|ZP_04387931.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229318530|gb|EEN84388.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length = 269 Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats. Identities = 57/247 (23%), Positives = 110/247 (44%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + +++G + + + + L + Q ++G +L+ G IA Sbjct: 16 ALQGGYLIGFSVQALFGLFTAILRRRLSLHETVTQTLFIGRVSTGPSLLLMIPIGVFIAV 75 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 + GA +S +++ + + + L+ A+M+AG +GSAI ++GS KI EEIDA+ Sbjct: 76 SVGELAGRIGAGGYSGAVVAFIIVGQAAALVCALMMAGVAGSAICTDLGSRKIREEIDAM 135 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+D + L++PR+ A +I L + F +I + +P F + F Sbjct: 136 EVMGIDVIERLVAPRLVAAVIVSLALCSMVTFGGVIACYLYHIYVQHLPAGTFMATFSQY 195 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++ L+KA A +VA +G + V VV + ++V I++++ Sbjct: 196 GRSSDFVMALVKAAVFGIASTLVATFKGLHAKGGPRGVADAVNEAVVIAFALVFIVNTVL 255 Query: 365 AIFYFAI 371 + Y I Sbjct: 256 SALYTVI 262 >gi|118616793|ref|YP_905125.1| integral membrane protein YrbE1A [Mycobacterium ulcerans Agy99] gi|118568903|gb|ABL03654.1| conserved hypothetical integral membrane protein YrbE1A [Mycobacterium ulcerans Agy99] Length = 267 Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats. Identities = 52/245 (21%), Positives = 101/245 (41%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + + ++G + ++ LI Q ++V + I++S ++ Sbjct: 15 DQLETSLTMVGGFFRMCVLTGKALFRRPFQWRELILQCWFVMRVALLPTIMVSIPLTVLL 74 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 L+QFGA S +I + ++G L T +++AG +AI A++G+ I EEID Sbjct: 75 IFTLNVLLAQFGAADISGAGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEID 134 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +G+D + L+ PR+ A LL L ++G + +I + + Sbjct: 135 AMEVLGIDPIHRLVVPRVIAATFVATLLNALVITVGLVGGYLFGVYLQNINGGAYLATLT 194 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + + + ++KA G+V G V S LG V VV + + ++ Sbjct: 195 TITGMPEVTIAMVKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVVALYAVNV 254 Query: 363 LFAIF 367 + Sbjct: 255 ILTTI 259 >gi|42525131|ref|NP_970511.1| ABC-type organic solvent resistance transporter, permease protein. [Bdellovibrio bacteriovorus HD100] gi|39577342|emb|CAE81165.1| ABC-type organic solvent resistance transporter, permease protein [Bdellovibrio bacteriovorus HD100] Length = 259 Score = 173 bits (438), Expect = 6e-41, Method: Composition-based stats. Identities = 56/243 (23%), Positives = 112/243 (46%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 S +G + + K + Q++ V V P + F GA++ Sbjct: 4 ITSLLDQMGATLLFLQRILRTMIFKKLKTHEIFEQIWKVTVDSFPTTAMAGFFVGAIMTV 63 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q A Q+ +FGA + L + RE+G LL A M++G+ G+ AE+G+MK+ E+IDA+ Sbjct: 64 QFAMQVKEFGALGYLGALATSATFREVGPLLIAFMLSGKVGAFTSAELGTMKVTEQIDAV 123 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R +G D ++ +I PR +I+S L ++ G ++ + + + + Sbjct: 124 RCLGADPIQEIIVPRFVGIIVSSFFLLAAGLMMSVFGGMLLGELFAGVNYEEYLRHVPLI 183 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + +I +GL+K A + + +G+A + +G+ V V ++ ++++D + Sbjct: 184 VSPVSILSGLVKCGTFAVVLATICTYQGYATTGGAKGVGRAVVATAVTTMICIVVMDWMT 243 Query: 365 AIF 367 + Sbjct: 244 SFI 246 >gi|239931479|ref|ZP_04688432.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis ATCC 14672] gi|291439855|ref|ZP_06579245.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis ATCC 14672] gi|291342750|gb|EFE69706.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis ATCC 14672] Length = 268 Score = 173 bits (438), Expect = 6e-41, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 101/245 (41%), Gaps = 9/245 (3%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVIAQQ 185 ++ + +L + R + V + V+I ++ TG V+ Q Sbjct: 15 LLFYARALLWIPRTLRRYLKEVQRLLAEVAFGSGGLGVIGGTIGVMIAMTLFTGTVVGLQ 74 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 G L Q G F+ + + REI L+ + ++ G+ A++G+M+INEE+DA+ Sbjct: 75 GYAALDQIGTAAFTGFVSAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVDALE 134 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MG+ + L++ RI A ++++ L + S+ + + V + + F Sbjct: 135 GMGIRSMPYLVTTRIIAGVVAIVPLYAIGLLSSYLASRSVTVLFNGQSRGTYDHYFALFL 194 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + ++ ++K + + + G+ +G V V +I ++ + D + Sbjct: 195 SPTDVLLSVLKVLIFSVMVILAHCYYGYRATGGPAGVGVAVGRSVRNAIVLISVTDFFLS 254 Query: 366 IFYFA 370 + + Sbjct: 255 LALWG 259 >gi|30468225|ref|NP_849112.1| ORF251 [Cyanidioschyzon merolae strain 10D] gi|30409325|dbj|BAC76274.1| ycxr [Cyanidioschyzon merolae strain 10D] Length = 251 Score = 172 bits (437), Expect = 6e-41, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 105/240 (43%), Gaps = 1/240 (0%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + ++ + + ++ + L + Q+ ++ + + + S G V+ Q Sbjct: 1 MQMISSILSILRFQAQIIVHLFHWR-YPLMIKWQIAWIAEQSLSLCWIHSCFLGMVLCLQ 59 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A +L A ++ + LRE+ + TA+++ R S+ +E+ SM ++E+ DA+ Sbjct: 60 LAKELISLQATPMIGAILGLTLLRELSPVFTAILLTARVASSYTSELASMCVSEQFDALY 119 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 + ++ I PR A +I LPL T +++ + + Y IP +F + S+ Sbjct: 120 LLQTHPFQLHIIPRYLACLIMLPLCTWFCFLTSLSASLFLACLAYGIPVNLFLTSLRSSL 179 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 +L +I T L+KA + +++ S + T VV + +++ D L + Sbjct: 180 SLWDILTSLLKAMIFGALLALISCHYALITRGGSKQIAISTTRAVVHVLVLILAFDWLLS 239 >gi|296138972|ref|YP_003646215.1| hypothetical protein Tpau_1245 [Tsukamurella paurometabola DSM 20162] gi|296027106|gb|ADG77876.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM 20162] Length = 287 Score = 172 bits (437), Expect = 6e-41, Method: Composition-based stats. Identities = 63/274 (22%), Positives = 116/274 (42%), Gaps = 4/274 (1%) Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLI-- 157 R F NL GK F + + VI ++L+ I Sbjct: 6 RPRGTRWFYNLFGSSGKAWTGF-DSLGHVVSFIAEVIRTVPHAIKHYRSQIMYILTDITW 64 Query: 158 -RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 R VG PV+ ++ GA++A QG L+ G + S RE LL Sbjct: 65 GRGALVVGGGTAPVLAVLGITVGAIVAVQGFAILNMLGMGPLTAVAASFANTREFAPLLA 124 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 V A ++G + AEIG+M+INEEIDA+ ++GL V +++ R+ A +I++ + ++ Sbjct: 125 GVGFAAQAGCRMTAEIGAMRINEEIDALESLGLRSVSFVVTTRVLAGLIAVIPVYLITLI 184 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + + + ++ Y +P + F + ++I +IK A+ I+ +GF Sbjct: 185 LSWLSCAWMVTSVYGMPTGTYQHYFSQFVSASDIIFSVIKVAVFLVAVIIIHCYQGFFAS 244 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +G + S+ V+I++ + + + Sbjct: 245 GGPEGVGTASGRAIRASLVAVVILNLVMTVALWG 278 >gi|41406855|ref|NP_959691.1| hypothetical protein MAP0757 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395205|gb|AAS03074.1| hypothetical protein MAP_0757 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 260 Score = 172 bits (437), Expect = 6e-41, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 107/251 (42%), Gaps = 1/251 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 ++ D +G + + + + ++ + Q ++V + +L++ Sbjct: 3 ALRLKVDMSGAMQAVGALFAMSADAVKYLFRRPFQWREFLEQSWFVARVSLAPTLLVAIP 62 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 +++ L + GA S + + ++G L+T +++AG +A+ A++GS I Sbjct: 63 FTVLVSFTLNILLRELGAADLSGAGAAFGAVTQLGPLVTVLIVAGAGATAMCADLGSRTI 122 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EEIDA+ +G++ ++ L++PR+ A + LL L ++G + D+ F Sbjct: 123 REEIDAMEVLGINPIQRLVTPRMLASGLVAFLLNSLVVIIGVLGGYVFSVFVQDVNPGAF 182 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISI 356 + + + IKA G+VA G + G + ++G V VV + Sbjct: 183 AAGITLLTGVPEVVISCIKAALFGLIAGLVACYRGLSITGGGAKAVGNAVNETVVYAFMS 242 Query: 357 VIIIDSLFAIF 367 + +++ + Sbjct: 243 LFVVNVVVTAI 253 >gi|162451969|ref|YP_001614336.1| putative ABC transport system permease protein [Sorangium cellulosum 'So ce 56'] gi|161162551|emb|CAN93856.1| putative ABC transport system permease protein [Sorangium cellulosum 'So ce 56'] Length = 285 Score = 172 bits (437), Expect = 6e-41, Method: Composition-based stats. Identities = 57/283 (20%), Positives = 109/283 (38%), Gaps = 10/283 (3%) Query: 90 RKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKF 149 + + IG + + + + K Sbjct: 10 DRPSAGPPSSELRDLAPEASGVAAIGAAALSLFQSARELYSVFVRTLYYCA-------KG 62 Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE-IFSIDLMSILQL 208 + ++++QMY +G + + ++ G ++ Q Q + + L + Sbjct: 63 RREPGAVLQQMYEIGNKSLFFLTVVMGFIGMIMVFQAGQQAKRVIPDLTMLGATYLELLV 122 Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268 R++ + A+M+A R G+ I AEIGSM + E++DA+R D + LI PR A ++ Sbjct: 123 RDLAASIAALMLATRVGAGIAAEIGSMVVTEQVDALRMCAADPIDYLIKPRFIASLLMTT 182 Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328 L + + + + + +D+ F + S ++ TGL K AI +V+ Sbjct: 183 CLIVWSAAVSFTTGMVTAYSMFDVSPETFMN--VSLVDAGDLATGLAKCVAYGAAIPVVS 240 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 G + S +G T VV S VI+++ L + F I Sbjct: 241 GHSGLSTFGGSEGVGWATTRAVVNSSLAVIVLNMLISAAAFLI 283 >gi|296179481|gb|ADG96486.1| SupB [Gordonia cholesterolivorans] Length = 287 Score = 172 bits (437), Expect = 7e-41, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 109/278 (39%), Gaps = 6/278 (2%) Query: 96 QKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLL- 154 P R F+ L +++ + Q G + + LL Sbjct: 3 SAPTREPSRARFERLAPG---RLLTPADRLGRQLAFYGASLRAVPRAFTHYRRETIRLLA 59 Query: 155 --SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 SL V V ++ ++ G + QQG+ L + G E S + + RE Sbjct: 60 EVSLGAGALAVIGGTVVIIGFLTAAAGYEVGQQGSSSLGRVGVEAMSGFISAFFNTREAI 119 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 ++ V + GS A++G+M+++EEIDA+ M + + L+S RI A ++++ L Sbjct: 120 PVIAGVALTATVGSGFTAQLGAMRVSEEIDALEVMSVQSLPYLVSTRIAAGLVAIIPLYA 179 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 +A F+ V D + F +++ L+K MA A+ V G Sbjct: 180 IALFTGYAATKFVSVFLSDQSPGTYDHYFQLFLQPSDVAISLLKVIVMAVAVMAVHCYYG 239 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +G V V S+ I++++D + I + Sbjct: 240 YNASGGPAGVGVAVGHAVRTSLIIIMVVDFVVGIALYG 277 >gi|41409700|ref|NP_962536.1| hypothetical protein MAP3602 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398532|gb|AAS06152.1| hypothetical protein MAP_3602 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 271 Score = 172 bits (437), Expect = 7e-41, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 100/245 (40%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + + ++G + +++ + Q +++ I++S ++ Sbjct: 19 DQLETPLTLVGGFFRMCVLTGKALFRWPFQWREFVLQCWFIMRVAFLPTIMVSIPLTVLL 78 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 L+QFGA S +I + ++G L T +++AG +AI A++G+ I EEID Sbjct: 79 IFTLNVLLAQFGAADLSGAGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEID 138 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +G+D + L+ PR+ A + LL L ++G + ++ + + Sbjct: 139 AMEVLGIDPIHRLVVPRVIAATLVATLLNGLVITVGLVGGYLFGVYLQNVSGGAYLATLT 198 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + L + +KA G+V G V S LG V VV + + ++ Sbjct: 199 TITGLPEVVIATVKAAVFGLIAGLVGCFRGLTVRGGSKGLGTAVNETVVLCVVALYAVNV 258 Query: 363 LFAIF 367 + Sbjct: 259 VLTTI 263 >gi|254773835|ref|ZP_05215351.1| TrnB1 protein [Mycobacterium avium subsp. avium ATCC 25291] Length = 260 Score = 172 bits (437), Expect = 8e-41, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 107/251 (42%), Gaps = 1/251 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 ++ D +G + + + + ++ + Q ++V + +L++ Sbjct: 3 ALRLKVDVSGAMQAVGALFAMSADAVKYLFRRPFQWREFLEQSWFVARVSLAPTLLVAIP 62 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 +++ L + GA S + + ++G L+T +++AG +A+ A++GS I Sbjct: 63 FTVLVSFTLNILLRELGAADLSGAGAAFGAVTQLGPLVTVLIVAGAGATAMCADLGSRTI 122 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EEIDA+ +G++ ++ L++PR+ A + LL L ++G + D+ F Sbjct: 123 REEIDAMEVLGINPIQRLVTPRMLASGLVAFLLNSLVVIIGVLGGYVFSVFVQDVNPGAF 182 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISI 356 + + + IKA G+VA G + G + ++G V VV + Sbjct: 183 AAGITLLTGVPEVVISCIKAALFGLIAGLVACYRGLSITGGGAKAVGNAVNETVVYAFMS 242 Query: 357 VIIIDSLFAIF 367 + +++ + Sbjct: 243 LFVVNVVVTAI 253 >gi|284043083|ref|YP_003393423.1| hypothetical protein Cwoe_1620 [Conexibacter woesei DSM 14684] gi|283947304|gb|ADB50048.1| protein of unknown function DUF140 [Conexibacter woesei DSM 14684] Length = 246 Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats. Identities = 54/233 (23%), Positives = 104/233 (44%), Gaps = 2/233 (0%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYY-VGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 ++I +S + + Q + + + P+++ Q A L Sbjct: 1 MMILTGKTLVSSVRPPYPYGGEFVSQFLFALKLCWFPLLVSTVAFGYGAPGLQAANFLVL 60 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 FGA + +RE +TA+++AG +G+AI A++G+ KI EE+DA++ +G+D V Sbjct: 61 FGALDRLGGFFVLASIREFAPFVTAIVLAGVAGTAITADLGARKIREELDALQVLGVDPV 120 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 + L+ PR AL++ L + A + G ++ P FF+ F + A+ +++ Sbjct: 121 KNLVVPRFLALMLVTGLFDVYALLFGVFGG-VIATLVNGAPLGPFFATFLTNASTTDLWG 179 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 L+K I IV +G + +G+ V VV + + + +F Sbjct: 180 SLLKTTLFGAIIAIVCCYKGMTASGGAEGVGRAVNQAVVIAFMGIFAFNYVFT 232 >gi|120401972|ref|YP_951801.1| hypothetical protein Mvan_0957 [Mycobacterium vanbaalenii PYR-1] gi|119954790|gb|ABM11795.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 281 Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats. Identities = 55/236 (23%), Positives = 106/236 (44%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + F + + IRQ ++ + V +L++ G ++ Q A Q GA Sbjct: 40 VRTVQYFLLDLFSGRFQWQEFIRQGAFMAGTAVLPTVLVALPIGVTLSIQFALLAGQVGA 99 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 + + +R+ L A+++A GSAI A++GS + EE DA+ MG+ +R L Sbjct: 100 TSLAGAASGLAVIRQAASLTAAILMAAAVGSAITADLGSRTMREETDAMEVMGVSVIRRL 159 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PR A I+ LT + F + + + + + F + F S AT ++ L+ Sbjct: 160 VVPRFAAAIMIGVALTGVVCFVGFLASYLFNVYFQNGAPGSFVATFASFATTGDMIVALV 219 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 KA + +V+ ++G A + V VV+SI ++++++ + Y + Sbjct: 220 KAVIFGAIVAVVSCQKGLATQGGPTGVANSVNAAVVESILLLMVVNVAISQLYIMM 275 >gi|326331737|ref|ZP_08198025.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] gi|325950536|gb|EGD42588.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] Length = 280 Score = 171 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 110/268 (41%), Gaps = 11/268 (4%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N +G +IVK + ++ + + + ++ + V Sbjct: 1 MTNTLAQVGNQIVKEQRQAVEGYGD--QLLFYAKALAWAPRTIRRYKREVLNILAEVAFG 58 Query: 167 G---------VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 V V+ ++F G+ + QG LSQ G FS + + RE+ L+++ Sbjct: 59 AGGLTMIAGTVGVIAFMAFFAGSEVGIQGYASLSQIGVAKFSAFISAFFNTREVAPLISS 118 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 + +A G A +G+M+I+EEIDA+ MG+ + L++ R+ A +++ L I+A + Sbjct: 119 IALAATVGCGYTARLGAMRISEEIDALEAMGVPSLPYLVTTRMIAGFLAVIPLYIVALCA 178 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 + + ++ Y + F + +I +K +A AI ++ G+ Sbjct: 179 SYLSPRLITTLMYGQSGGTYDHYFLAFLPPIDILYSFLKLIILAVAIILIHCYYGYTASG 238 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFA 365 +G V + SI V++ D + Sbjct: 239 GPAGVGIAVGKAIRTSIVTVVVADFFLS 266 >gi|117164592|emb|CAJ88138.1| putative ABC-transporter integral membrane protein [Streptomyces ambofaciens ATCC 23877] Length = 268 Score = 171 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 100/246 (40%), Gaps = 9/246 (3%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV---------VILISFVTGAVIAQ 184 ++ +L + R + V + +I ++ TG V+ Sbjct: 14 QLLFYVRSLLWIPRTLHRYLREVQRLLAEVAFGTGGLGVVGGTIGVMIAMTLFTGTVVGL 73 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L Q G F+ + + REI L+ + ++ G+ A++G+M+INEE+DA+ Sbjct: 74 QGYAALDQIGTAAFTGFVSAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVDAL 133 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ + L++ RI A ++++ L + S+ + + V + + F+ Sbjct: 134 EGMGIRSLPYLVTTRIIAGVVAIIPLYAIGLLSSYLASRYVTVLFNGQSRGTYDHYFNLF 193 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + ++ ++K + + + G+ +G V V +I ++ + D Sbjct: 194 LSPTDVLLSVLKVFIFSVMVIVAHCYYGYRASGGPAGVGTAVGRSVRNAIVLISVTDFFL 253 Query: 365 AIFYFA 370 ++ + Sbjct: 254 SLALWG 259 >gi|320007321|gb|ADW02171.1| protein of unknown function DUF140 [Streptomyces flavogriseus ATCC 33331] Length = 267 Score = 171 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 45/242 (18%), Positives = 101/242 (41%), Gaps = 9/242 (3%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVIAQ 184 + + +L + R + V + V+I ++ TG+V+ Sbjct: 13 QLTFYVRALVWIPRTLRRYLKEVQRLLAEVAFGSGGLGVIGGTIGVMIAMTLATGSVVGL 72 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L Q G F+ + + REI L+ + ++ G+ A++G+M+INEE+DA+ Sbjct: 73 QGYAALDQIGTSAFTGFISAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVDAL 132 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ + L++ RI A ++++ L + S+ + + + + + F+ Sbjct: 133 EAMGVRSMPYLVTTRIIAGVVAIIPLYAIGLLSSYLASRWITVLFNGQSAGTYDHYFNLF 192 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + ++ ++K + + + GF +G V V +I ++ + D Sbjct: 193 LSPDDVLLSVLKVLIFSVLVILAHCYYGFHATGGPAGVGVAVGRSVRNAIVLISVTDFFL 252 Query: 365 AI 366 ++ Sbjct: 253 SL 254 >gi|254447411|ref|ZP_05060877.1| ABC transporter permease protein [gamma proteobacterium HTCC5015] gi|198262754|gb|EDY87033.1| ABC transporter permease protein [gamma proteobacterium HTCC5015] Length = 290 Score = 171 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 112/257 (43%), Gaps = 2/257 (0%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172 +G+ +V+ ++ L + + Y + L + Q+Y+ G + Sbjct: 26 QVGRYVVQRTVFLFELLRLIYLGVRT--SWFEQGYASRARLAVIGAQVYHTGFKALGTAT 83 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 ++ V GA++ Q + QL G ++ ++ +RE+ L+TA ++ RSG+A+ E+ Sbjct: 84 PLAVVAGALVIFQASNQLYIVGGREHIGQIVIMIVVRELAPLVTAFIVIARSGTAVATEV 143 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 +M+ N EI+++ +G+ ++ PRI A +I+ L +A+ G V + ++ Sbjct: 144 ANMRANHEIESLEALGIHPYAYVVFPRIMAGMIATICLAFYFMVAAMYGGYFVTVPWSNL 203 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 + +F + + + K I ++ G V + + T V+ Sbjct: 204 NVSTYFYALDEAIQIRDYVLFITKTLVSGALIFSISCYYGLQVKQGHDEVPIATTRAVIH 263 Query: 353 SISIVIIIDSLFAIFYF 369 ++S +I + ++ ++ Sbjct: 264 ALSYIIFFNLAASVVFY 280 >gi|262203811|ref|YP_003275019.1| hypothetical protein Gbro_3952 [Gordonia bronchialis DSM 43247] gi|262087158|gb|ACY23126.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247] Length = 254 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 47/234 (20%), Positives = 97/234 (41%), Gaps = 4/234 (1%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + L + + E ++++ + Q + + + +L++ +++ Sbjct: 9 LGGIGDFVALGVDSARELFHRPFQWR----ETVEQSWAIARVSMVPTLLVAIPFTVLVSF 64 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 L + GA+ S ++ + +IG ++T +++AG +AI A++G+ I EEIDA+ Sbjct: 65 TLNILLREIGAQDLSGAGAALGTITQIGPIVTVLIVAGAGATAICADLGARTIREEIDAM 124 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 + +G++ + L+ PRI A LL L I G + D+ F + Sbjct: 125 KVLGINPIHRLVVPRIIASTGVAVLLNSLVCTIGIGGGFVFSVYLQDVNPGAFIANLTLL 184 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + ++KA G+V +G V + +G V VV S + Sbjct: 185 TGFGELMISMVKAALFGLFAGMVGCYQGLNVKGGAKGVGDAVNETVVYSFMALF 238 >gi|302560791|ref|ZP_07313133.1| ABC-transporter integral membrane protein [Streptomyces griseoflavus Tu4000] gi|302478409|gb|EFL41502.1| ABC-transporter integral membrane protein [Streptomyces griseoflavus Tu4000] Length = 268 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 100/245 (40%), Gaps = 9/245 (3%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVIAQQ 185 ++ +L + R + V + V+I ++ TG V+ Q Sbjct: 15 LLFYARALLWVPRTLHRYLREVQRLLAEVAFGSGGLGVIGGTIGVMIAMTLFTGTVVGLQ 74 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 G L Q G F+ + + REI L+ + ++ G+ A++G+M+INEE+DA+ Sbjct: 75 GYAALDQIGTAAFTGFVSAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVDALE 134 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MG+ + L++ RI A ++++ L + S+ + + V + + F Sbjct: 135 GMGIRSMPYLVTTRIIAGVVAIVPLYAIGLLSSYLASRYVTVLFNGQSRGTYDHYFALFL 194 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + ++ ++K + + + G+ +G V V +I ++ + D + Sbjct: 195 SPTDVLLSVLKVLIFSVMVILAHCYYGYRATGGPAGVGVAVGRSVRNAIVLISVTDFFLS 254 Query: 366 IFYFA 370 + + Sbjct: 255 LALWG 259 >gi|54027082|ref|YP_121324.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54018590|dbj|BAD59960.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 288 Score = 171 bits (434), Expect = 2e-40, Method: Composition-based stats. Identities = 51/273 (18%), Positives = 109/273 (39%), Gaps = 9/273 (3%) Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 R+ I + + ++ + Q I+ ++ ++ L+ + Sbjct: 6 RNPALAKTVRRAGEIARAPLNVVDRAGEQMSFYARAIAWIPRAAVH---YRKEVMRLLAE 62 Query: 160 MYY------VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 + + V + V++ +S G V+ QG L G+ + + L + + REI Sbjct: 63 VTFGSGALAVIGGTIGVIVFMSGSVGVVVGLQGFKALDAIGSSVLTGFLTAYINTREIAP 122 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 L+ A+ ++ G A++G+M+I+EEIDA+ M + V L++ R+ A +++ L I+ Sbjct: 123 LVAALALSATVGCGFTAQLGAMRISEEIDALEVMAVPGVPFLVTTRVIAGFLAVIPLYIV 182 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 A + + + + F ++ +K A I +V GF Sbjct: 183 GLLGAYFASRSISIWFNGQSSGSYDHYFSLFLPPEDVLYSFLKVLVFAFVIILVHCYYGF 242 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 +G V V +I +V ++D ++ Sbjct: 243 TATGGPAGVGVAVGRAVRAAIVLVNVLDFFLSL 275 >gi|254822928|ref|ZP_05227929.1| hypothetical protein MintA_23574 [Mycobacterium intracellulare ATCC 13950] Length = 255 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 100/245 (40%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + + ++G + +++ + Q +++ I++S ++ Sbjct: 3 DQLQTPLELVGGFFRMCVLTGKALFRWPFQWREFVLQCWFIMRVAFLPTIMVSIPLTVLL 62 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 L+QFGA S +I + ++G L T +++AG +AI A++G+ I EEID Sbjct: 63 IFTLNVLLAQFGAADLSGAGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEID 122 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +G+D + L+ PR+ A + LL L ++G + ++ + + Sbjct: 123 AMEVLGIDPIHRLVVPRVIAATLVATLLNGLVITVGLVGGYLFGVYLQNVSGGAYLATLT 182 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + L + +KA G+V G V S LG V VV + + ++ Sbjct: 183 TITGLPEVVIATVKAAVFGLIAGLVGCFRGLTVRGGSKGLGTAVNETVVLCVVALYAVNV 242 Query: 363 LFAIF 367 + Sbjct: 243 VLTTI 247 >gi|296171119|ref|ZP_06852572.1| integral membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894375|gb|EFG74128.1| integral membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 256 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 55/245 (22%), Positives = 107/245 (43%), Gaps = 4/245 (1%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 S + + + ++ FLL Q ++V + +L++ ++ Sbjct: 12 LRSAGEFFAMSLDTFVAMFKLPFPWREFLL----QTWFVARVSIIPTLLLTIPFTVLVVF 67 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 L +FGA FS + + +IG ++T +++AG +A+ A++G+ I++E+DA+ Sbjct: 68 TMNILLVEFGAADFSGTGAATASVTQIGPVVTVLVVAGTGATAMCADLGARAIHDELDAL 127 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R MG+D VR L +PR+ A + L L + G+ + F + Sbjct: 128 RVMGVDPVRRLAAPRVLAATVVAVSLVSLVTLVGLGGSFFFSVFIQHVTPGAFAAGLTLL 187 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L ++ GL+K A ++A +G +VG +G V VV S + +I+ + Sbjct: 188 THLPDLVLGLVKGALFGMAAALIACYKGISVGGGPQGVGNAVNETVVYSFIALFVINIVA 247 Query: 365 AIFYF 369 Y+ Sbjct: 248 TAVYY 252 >gi|218961658|ref|YP_001741433.1| hypothetical protein; putative membrane protein [Candidatus Cloacamonas acidaminovorans] gi|167730315|emb|CAO81227.1| hypothetical protein; putative membrane protein [Candidatus Cloacamonas acidaminovorans] Length = 253 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 62/239 (25%), Positives = 118/239 (49%) Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190 + E + LL +IRQ+ + GV +P++ I+ G + QG L Sbjct: 12 FFLFLEETVTELLHIKHNRHVSLLVVIRQILFTGVEALPLIGFIALAIGCLTIMQGYAFL 71 Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 S FG I+ ++ + + E+ ++TA+++ RSG+AI E+G+M +N E+ +++ + Sbjct: 72 SNFGQGIWVHIILVRVVVGELSGIITALVVIARSGTAISTELGNMVVNREMQLLKSFDIA 131 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 + L+ RI ++IS+ +LT+ N A++G + + + F F + F S T I Sbjct: 132 PMGYLVVSRILGVVISMLVLTLYFNIIAVLGGWLFAQFFNHLSFGAFMNDFLSVLTFPYI 191 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 ++K+ I I A EG +V S + ++ VV SI V+I+D + + ++ Sbjct: 192 LMTILKSVIFGFVIAITASYEGMSVYRASTEVPQRTIKAVVISIFSVLILDLIISWLFW 250 >gi|311744213|ref|ZP_07718017.1| ABC superfamily ATP binding cassette transporter, membrane protein [Aeromicrobium marinum DSM 15272] gi|311312386|gb|EFQ82299.1| ABC superfamily ATP binding cassette transporter, membrane protein [Aeromicrobium marinum DSM 15272] Length = 257 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 60/239 (25%), Positives = 112/239 (46%) Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G + + ++ + + Q +++ + IL+S GA+IA Q Q Sbjct: 13 GQIAGMAIDVLRLTFTTRFQTREFVEQAWFITSVTLVPTILVSIPFGAIIALQVGSLTGQ 72 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 GA+ F+ + +RE + A++IAG +GSAI +++G+ KI EEIDA+ +G+D + Sbjct: 73 LGAQSFAGATAVLATVREAAPIAAALVIAGAAGSAICSDLGARKIREEIDAMEVLGIDPL 132 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 L+ PR A + L+ + + I G F S F + ATL +++ Sbjct: 133 ARLVVPRALATVAVALLINGIVITAGIAGGYFFTVVVQGGSAGAFLSSFAALATLPDVYV 192 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 ++KA IVA +G G + +G+ V V+ + ++ +++++ YF I Sbjct: 193 AMVKAAVFGFLTAIVAANKGLTAGGGPSGVGRAVNEAVILAFMLLFLLNAIITALYFQI 251 >gi|326383099|ref|ZP_08204788.1| hypothetical protein SCNU_09181 [Gordonia neofelifaecis NRRL B-59395] gi|326198235|gb|EGD55420.1| hypothetical protein SCNU_09181 [Gordonia neofelifaecis NRRL B-59395] Length = 246 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 51/230 (22%), Positives = 95/230 (41%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 + +G +S E ++ + Q + + + +L++ +++ Sbjct: 1 MNGVGEFVSLAVESARELFRRPFQWRETVEQSWAIARVSLVPTLLVAIPFTVLVSFTLNI 60 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L + GA+ S ++ + +IG ++T +++AG +AI A++G+ I EEIDA+ +G Sbjct: 61 LLREIGAQDLSGAGAALGTITQIGPIVTVLIVAGAGATAICADLGARTIREEIDALEVLG 120 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ V L+ PR+ A LL L I G I D+ F + L Sbjct: 121 INPVHRLVVPRVIASTGVALLLNSLVCTIGIAGGFIFSVYLQDVNPGAFIANLTLLTGLG 180 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + +IKA G+V G V + +G V VV S + Sbjct: 181 ELVISMIKAALFGLFAGLVGCYRGLNVKGGAKGVGDAVNETVVYSFMALF 230 >gi|118470268|ref|YP_889052.1| hypothetical protein MSMEG_4796 [Mycobacterium smegmatis str. MC2 155] gi|118171555|gb|ABK72451.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length = 257 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 49/250 (19%), Positives = 107/250 (42%), Gaps = 1/250 (0%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + + +G + S + + +++ + Q +++ + +L++ Sbjct: 1 MNLGRNLSGPMQAVGALFSMSLDAIMFAFRRPFQGREFLDQCWFIARVSMAPTLLVAIPF 60 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 +++ L + GA S + + ++G ++T +++AG +A+ A++GS I Sbjct: 61 TVLVSFTLNILLRELGAADLSGAGAAFGAVTQLGPMVTVLIVAGAGATAMCADLGSRTIR 120 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ +G++ ++ L++PRI A + LL L I+G + D+ F Sbjct: 121 EEIDAMEVLGINPIQRLVTPRILASGLVALLLNSLVVIIGILGGYVFSVFIQDVNPGAFA 180 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISIV 357 + + + IKA G+VA G VG + ++G V VV + + Sbjct: 181 AGITLLTGVPEVIISCIKAALFGLIAGLVACYRGLTIVGGGAKAVGNAVNETVVYAFMAL 240 Query: 358 IIIDSLFAIF 367 +I+ + Sbjct: 241 FVINVVVTAI 250 >gi|226349636|ref|YP_002776750.1| putative YrbE family protein [Rhodococcus opacus B4] gi|226245551|dbj|BAH55898.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 304 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 49/238 (20%), Positives = 98/238 (41%), Gaps = 9/238 (3%) Query: 142 FCASSYKFKGFLLSLIRQMYYVGVSG---------VPVVILISFVTGAVIAQQGAFQLSQ 192 A F+ + +R + V + + V+ L++ G + QQGA L + Sbjct: 57 IAAIPRTFRRYRAETVRLLAEVSMGTGALAVIGGTLMVISLLTAAVGYEVGQQGATSLGR 116 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 G S + + RE + + + G+ A++G+M+++EEIDA+ TM + + Sbjct: 117 VGIGALSGFISAFFNTREAIPAIAGIALTATVGAGFTAQLGAMRVSEEIDAMETMSIPSL 176 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 L++ R+ A +I++ L +A F +V F+ F+ +++ Sbjct: 177 PYLVTTRVMAGVIAVIPLYSVALFVGYAATQLVTVYMIGEAKGTFWHYFNVFLVPSDVIW 236 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +K M+ + V G+ +G V V S+ +++ID L I + Sbjct: 237 SAVKVLAMSVVVMCVHCYHGYNASGGPAGVGVAVGRAVRTSLISIMVIDLLIGIAVYG 294 >gi|262196626|ref|YP_003267835.1| hypothetical protein Hoch_3440 [Haliangium ochraceum DSM 14365] gi|262079973|gb|ACY15942.1| protein of unknown function DUF140 [Haliangium ochraceum DSM 14365] Length = 268 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 3/225 (1%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSIL 206 + + RQMY +G + + G V QGA QL + G S L Sbjct: 41 RRGWRRREVARQMYDIGNRSFVFIAVTMGFFGMVFIYQGALQLDRIVGDVSLLGREFSKL 100 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 ++++G LTA+M+A R G+ I AE+GSM + E++DA+R G+ + L++PR+ A ++ Sbjct: 101 LVKDLGPSLTAMMLATRVGAGIAAELGSMTVTEQVDALRMSGVRPIDYLVAPRLLAALVM 160 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326 + L I A + W Y+D+ +F S ++ GL+KA A I + Sbjct: 161 VTALAIFGTAVAFAAGGLTAWAYFDLNPRAYFD--LSQVEFGHLGLGLVKAVVYAANIPL 218 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +A G S +G+ T V+ S V+ D ++ + Sbjct: 219 IAAFCGLRAHGGSAGVGRATTAAVIGSSFAVLSWDLALSLVALQL 263 >gi|15607308|ref|NP_214681.1| integral membrane protein YRBE1A [Mycobacterium tuberculosis H37Rv] gi|15839545|ref|NP_334582.1| hypothetical protein MT0176 [Mycobacterium tuberculosis CDC1551] gi|31791345|ref|NP_853838.1| integral membrane protein YRBE1A [Mycobacterium bovis AF2122/97] gi|121636079|ref|YP_976302.1| integral membrane protein YrbE1a [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148659931|ref|YP_001281454.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis H37Ra] gi|148821359|ref|YP_001286113.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis F11] gi|167970287|ref|ZP_02552564.1| hypothetical integral membrane protein yrbE1A [Mycobacterium tuberculosis H37Ra] gi|215406160|ref|ZP_03418341.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis 02_1987] gi|215414032|ref|ZP_03422691.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis 94_M4241A] gi|215448446|ref|ZP_03435198.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis T85] gi|218755901|ref|ZP_03534697.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis GM 1503] gi|224988552|ref|YP_002643239.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253797089|ref|YP_003030090.1| hypothetical protein TBMG_00168 [Mycobacterium tuberculosis KZN 1435] gi|254233556|ref|ZP_04926882.1| hypothetical integral membrane protein yrbE1A [Mycobacterium tuberculosis C] gi|254366619|ref|ZP_04982663.1| hypothetical integral membrane protein yrbE1A [Mycobacterium tuberculosis str. Haarlem] gi|254549106|ref|ZP_05139553.1| hypothetical protein Mtube_01351 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185030|ref|ZP_05762504.1| hypothetical protein MtubCP_03112 [Mycobacterium tuberculosis CPHL_A] gi|289445698|ref|ZP_06435442.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis CPHL_A] gi|289552419|ref|ZP_06441629.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis KZN 605] gi|289747934|ref|ZP_06507312.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis 02_1987] gi|289760269|ref|ZP_06519647.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|289764283|ref|ZP_06523661.1| hypothetical integral membrane protein yrbE1A [Mycobacterium tuberculosis GM 1503] gi|294994641|ref|ZP_06800332.1| hypothetical protein Mtub2_09017 [Mycobacterium tuberculosis 210] gi|297632645|ref|ZP_06950425.1| hypothetical protein MtubK4_00901 [Mycobacterium tuberculosis KZN 4207] gi|297729620|ref|ZP_06958738.1| hypothetical protein MtubKR_00931 [Mycobacterium tuberculosis KZN R506] gi|298527559|ref|ZP_07014968.1| YrbE1A [Mycobacterium tuberculosis 94_M4241A] gi|306774257|ref|ZP_07412594.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu001] gi|306779001|ref|ZP_07417338.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu002] gi|306782789|ref|ZP_07421111.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu003] gi|306787156|ref|ZP_07425478.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu004] gi|306791712|ref|ZP_07430014.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu005] gi|306795756|ref|ZP_07434058.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu006] gi|306801752|ref|ZP_07438420.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu008] gi|306805963|ref|ZP_07442631.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu007] gi|306970359|ref|ZP_07483020.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu009] gi|306974591|ref|ZP_07487252.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu010] gi|307082300|ref|ZP_07491470.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu011] gi|307082645|ref|ZP_07491758.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu012] gi|313656946|ref|ZP_07813826.1| hypothetical protein MtubKV_00916 [Mycobacterium tuberculosis KZN V2475] gi|2213504|emb|CAB09750.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE1A [Mycobacterium tuberculosis H37Rv] gi|13879657|gb|AAK44396.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|31616930|emb|CAD93037.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE1A [Mycobacterium bovis AF2122/97] gi|110348076|gb|ABG72765.1| YrbE1A [Expression vector yrbE1AB] gi|121491726|emb|CAL70188.1| Conserved hypothetical integral membrane protein yrbE1A [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124603349|gb|EAY61624.1| hypothetical integral membrane protein yrbE1A [Mycobacterium tuberculosis C] gi|134152131|gb|EBA44176.1| hypothetical integral membrane protein yrbE1A [Mycobacterium tuberculosis str. Haarlem] gi|148504083|gb|ABQ71892.1| conserved hypothetical integral membrane protein YrbE1a [Mycobacterium tuberculosis H37Ra] gi|148719886|gb|ABR04511.1| hypothetical integral membrane protein yrbE1A [Mycobacterium tuberculosis F11] gi|224771665|dbj|BAH24471.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253318592|gb|ACT23195.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis KZN 1435] gi|289418656|gb|EFD15857.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis CPHL_A] gi|289437051|gb|EFD19544.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis KZN 605] gi|289688462|gb|EFD55950.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis 02_1987] gi|289711789|gb|EFD75805.1| hypothetical integral membrane protein yrbE1A [Mycobacterium tuberculosis GM 1503] gi|289715833|gb|EFD79845.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|298497353|gb|EFI32647.1| YrbE1A [Mycobacterium tuberculosis 94_M4241A] gi|308217091|gb|EFO76490.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu001] gi|308328029|gb|EFP16880.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu002] gi|308332309|gb|EFP21160.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu003] gi|308336191|gb|EFP25042.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu004] gi|308339691|gb|EFP28542.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu005] gi|308343698|gb|EFP32549.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu006] gi|308347571|gb|EFP36422.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu007] gi|308351470|gb|EFP40321.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu008] gi|308352197|gb|EFP41048.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu009] gi|308356146|gb|EFP44997.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu010] gi|308360101|gb|EFP48952.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu011] gi|308367649|gb|EFP56500.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu012] gi|323717156|gb|EGB26365.1| hypothetical protein TMMG_00596 [Mycobacterium tuberculosis CDC1551A] gi|326905924|gb|EGE52857.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis W-148] gi|328456876|gb|AEB02299.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis KZN 4207] gi|328864228|gb|AEB53197.1| conserved integral membrane protein YRBE1A [Mycobacterium tuberculosis] Length = 265 Score = 170 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 52/245 (21%), Positives = 101/245 (41%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + + ++G + +++ I Q +++ G I++S ++ Sbjct: 13 DQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTVLL 72 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 L+QFGA S +I + ++G L T +++AG +AI A++G+ I EEID Sbjct: 73 IFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEID 132 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +G+D + L+ PR+ A ++ LL L ++G + ++ + + Sbjct: 133 AMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLATLT 192 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L + IKA G+V G V S LG V VV + + ++ Sbjct: 193 LITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFAVNV 252 Query: 363 LFAIF 367 + Sbjct: 253 ILTTI 257 >gi|118464753|ref|YP_884137.1| hypothetical protein MAV_5017 [Mycobacterium avium 104] gi|254776559|ref|ZP_05218075.1| hypothetical protein MaviaA2_18089 [Mycobacterium avium subsp. avium ATCC 25291] gi|118166040|gb|ABK66937.1| conserved hypothetical protein [Mycobacterium avium 104] Length = 258 Score = 170 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 100/245 (40%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + + ++G + +++ + Q +++ I++S ++ Sbjct: 6 DQLETPLTLVGGFFRMCVLTGKALFRWPFQWREFVLQCWFIMRVAFLPTIMVSIPLTVLL 65 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 L+QFGA S +I + ++G L T +++AG +AI A++G+ I EEID Sbjct: 66 IFTLNVLLAQFGAADLSGAGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEID 125 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +G+D + L+ PR+ A + LL L ++G + ++ + + Sbjct: 126 AMEVLGIDPIHRLVVPRVIAATLVATLLNGLVITVGLVGGYLFGVYLQNVSGGAYLATLT 185 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + L + +KA G+V G V S LG V VV + + ++ Sbjct: 186 TITGLPEVVIATVKAAVFGLIAGLVGCFRGLTVRGGSKGLGTAVNETVVLCVVALYAVNV 245 Query: 363 LFAIF 367 + Sbjct: 246 VLTTI 250 >gi|108800639|ref|YP_640836.1| hypothetical protein Mmcs_3673 [Mycobacterium sp. MCS] gi|119869778|ref|YP_939730.1| hypothetical protein Mkms_3746 [Mycobacterium sp. KMS] gi|108771058|gb|ABG09780.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119695867|gb|ABL92940.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] Length = 270 Score = 170 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 104/247 (42%), Gaps = 1/247 (0%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + + +G + + + + + ++ + Q ++V + +L++ + Sbjct: 17 VKNLAGPMAAVGGLFAMSADAIRNVFRRPFQWREFLEQSWFVAKVSLAPTVLVAIPFTVL 76 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 ++ L + GA S + + ++G L+T +++AG +A+ A++GS I EEI Sbjct: 77 VSFTLNILLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEI 136 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 A+ +G+D V+ L++PR+ A + LL L I+G D+ F + Sbjct: 137 SAMEVLGIDPVQRLVTPRMLASGLVALLLNSLVVIIGILGGYTFSVFIQDVNPGAFAAGI 196 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-GVHSNSLGKKVTTCVVQSISIVIII 360 + + +KA G+VA G V G + ++G V VV + + I Sbjct: 197 TLLTGVPEMIISCVKALLFGLIAGLVACYRGLTVSGGGAKAVGNAVNETVVYAFMALFAI 256 Query: 361 DSLFAIF 367 + L Sbjct: 257 NVLVTTV 263 >gi|260203312|ref|ZP_05770803.1| hypothetical protein MtubK8_03235 [Mycobacterium tuberculosis K85] gi|289572747|ref|ZP_06452974.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis K85] gi|289537178|gb|EFD41756.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis K85] Length = 265 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 52/245 (21%), Positives = 101/245 (41%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + + ++G + +++ I Q +++ G I++S ++ Sbjct: 13 DQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTVLL 72 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 L+QFGA S +I + ++G L T +++AG +AI A++G+ I EEID Sbjct: 73 IFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEID 132 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +G+D + L+ PR+ A ++ LL L ++G + ++ + + Sbjct: 133 AMEVLGIDPIHRLVVPRVLASMLVATLLNSLVITVGLVGGFLFGVYLQNVSGGAYLATLT 192 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L + IKA G+V G V S LG V VV + + ++ Sbjct: 193 LITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFAVNV 252 Query: 363 LFAIF 367 + Sbjct: 253 ILTTI 257 >gi|325673338|ref|ZP_08153030.1| ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] gi|325555928|gb|EGD25598.1| ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] Length = 269 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 55/247 (22%), Positives = 110/247 (44%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + +++G + + + + L ++Q ++G +L+ G +A Sbjct: 16 ALQGGYLIGFSVQAMVSLARALLRGRLSLEETVKQTLFIGRVSTGPSLLLMVPIGVFVAV 75 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 + GA +S +++ + + + L+ A+M+AG +GSAI ++GS KI EEIDA+ Sbjct: 76 SVGELAGRIGAGGYSGAVVAFIIVGQASALVCALMMAGVAGSAICTDLGSRKIREEIDAM 135 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+D V L++PR+ A ++ L + F ++ + +P F + F Sbjct: 136 EVMGIDVVERLVAPRLLAAVVVSVALCAMVTFGGVMACYLYHIYVQHLPAGTFLATFGQY 195 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A+ L+KA A +VA +G + V VV + ++V ++++ Sbjct: 196 GRTADFVMALVKAAIFALTSTLVATFKGLHAKGGPRGVADAVNEAVVIAFALVFVVNTAL 255 Query: 365 AIFYFAI 371 + Y I Sbjct: 256 SALYTVI 262 >gi|271964523|ref|YP_003338719.1| resistance to organic solvents ABC transporter permease [Streptosporangium roseum DSM 43021] gi|270507698|gb|ACZ85976.1| ABC-type transport system involved in resistance to organic solvents permease component-like protein [Streptosporangium roseum DSM 43021] Length = 288 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 59/210 (28%), Positives = 103/210 (49%) Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 +G V V ++F GA + QG L GAE F + S +REI ++ AV +A Sbjct: 72 IGGGMVFVAFTMAFAVGATVGLQGYQGLQAIGAESFIGLVGSFANVREITPIIAAVALAA 131 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 + GS+ AE+G+M+I+EEIDA+ M ++ LI R+ A +I+L + ++A F++ Sbjct: 132 QVGSSFTAELGAMRISEEIDALEVMAINAFTYLICTRVVAALIALVPVYLIALFASFFAT 191 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 ++ + + V+ F+ L +I +IK A A+ + GF + Sbjct: 192 RLMCTVLFGMSPGVYDYYFYLGLPLIDIVYSVIKVIVFAFAVISIHCYYGFNATGGPVGV 251 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 G + QSI VI+++ L + ++ G Sbjct: 252 GTAAGRAIRQSIVTVILLNLLLSYLFWGNG 281 >gi|215425374|ref|ZP_03423293.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis T92] gi|215433087|ref|ZP_03431006.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis EAS054] gi|219555965|ref|ZP_03535041.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis T17] gi|260199170|ref|ZP_05766661.1| hypothetical protein MtubT4_03250 [Mycobacterium tuberculosis T46] gi|289441542|ref|ZP_06431286.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis T46] gi|289568066|ref|ZP_06448293.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis T17] gi|289748643|ref|ZP_06508021.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis T92] gi|289756232|ref|ZP_06515610.1| integral membrane protein [Mycobacterium tuberculosis EAS054] gi|289414461|gb|EFD11701.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis T46] gi|289541819|gb|EFD45468.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis T17] gi|289689230|gb|EFD56659.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis T92] gi|289696819|gb|EFD64248.1| integral membrane protein [Mycobacterium tuberculosis EAS054] Length = 265 Score = 170 bits (431), Expect = 4e-40, Method: Composition-based stats. Identities = 52/245 (21%), Positives = 101/245 (41%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + + ++G + +++ I Q +++ G I++S ++ Sbjct: 13 DQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTVLL 72 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 L+QFGA S +I + ++G L T +++AG +AI A++G+ I EEID Sbjct: 73 IFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEID 132 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +G+D + L+ PR+ A ++ LL L ++G + ++ + + Sbjct: 133 AMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLATLT 192 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L + IKA G+V G V S LG V VV + + ++ Sbjct: 193 LITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFAVNV 252 Query: 363 LFAIF 367 + Sbjct: 253 ILTTI 257 >gi|325003317|ref|ZP_08124429.1| integral membrane protein yrbe4b [Pseudonocardia sp. P1] Length = 280 Score = 170 bits (430), Expect = 5e-40, Method: Composition-based stats. Identities = 53/271 (19%), Positives = 104/271 (38%), Gaps = 10/271 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILG-LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG- 167 + +G + + +Q LG + T K + + R + V Sbjct: 1 MATQLGTRARRLAQAPLNQLEELGDQLSLYTRSIVWIPKTLKDYRKEVARLLAEVSFGSG 60 Query: 168 --------VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219 V V+ +S G+++ QG L G E + + + R I L+ A Sbjct: 61 ALIVILGTVGVMASLSLFVGSLVGLQGFRALDALGVEALTGFITAYFNTRSIAPLVAASA 120 Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279 + G+ A++G+M+I+EEIDA+ M + V L++ R+ A I+++ + L ++ Sbjct: 121 LTATLGAGFTAQLGAMRISEEIDALEVMAVPSVPYLVTTRVIAGIVAIIPIYTLGLLASY 180 Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339 A + + + + F ++++ +K A I ++ G+A Sbjct: 181 AAARLNVTLVNGLSGGTYDHYFDLFLPVSDVLLSYLKVIVFATVIILIHCHYGYAAKGGP 240 Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +G V V SI I+D + F Sbjct: 241 AGVGVAVGRAVRLSIVSTAILDFFLTLVMFG 271 >gi|256820380|ref|YP_003141659.1| hypothetical protein Coch_1553 [Capnocytophaga ochracea DSM 7271] gi|315223460|ref|ZP_07865317.1| ABC superfamily ATP binding cassette transporter permease protein [Capnocytophaga ochracea F0287] gi|256581963|gb|ACU93098.1| protein of unknown function DUF140 [Capnocytophaga ochracea DSM 7271] gi|314946633|gb|EFS98624.1| ABC superfamily ATP binding cassette transporter permease protein [Capnocytophaga ochracea F0287] Length = 245 Score = 170 bits (430), Expect = 5e-40, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 102/243 (41%), Gaps = 2/243 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G + ++ ++R++ + + +V ISF G V+A Q A Sbjct: 4 IAAVGGYFIMLYDVFRKRTRWSIMKDLILREIDDLIFGSIGIVTFISFFVGGVVAVQTAL 63 Query: 189 QLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + F + + E TA+++AG+ GS I + IG+M++ E+IDA+ M Sbjct: 64 NIDNPFIPKYLIGFATRQSIVLEFAPTFTAIILAGKIGSFITSSIGTMRVTEQIDALDIM 123 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ V L+ P+I AL++ +P L L + ++G A F Sbjct: 124 GVNSVNYLVFPKIVALML-MPFLIALGMYLGVLGGWASAVMSGYTTSAEFVQGVQYDFKP 182 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ K A + + G+ + + +GK T V + ++I+ +S+ Sbjct: 183 YSMIYAFTKTVVFAFFLATIPSYHGYYMKGGALDVGKASTVSFVWTSIVIILSNSVLTQL 242 Query: 368 YFA 370 ++A Sbjct: 243 FYA 245 >gi|126436263|ref|YP_001071954.1| hypothetical protein Mjls_3686 [Mycobacterium sp. JLS] gi|126236063|gb|ABN99463.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 270 Score = 170 bits (430), Expect = 5e-40, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 103/247 (41%), Gaps = 1/247 (0%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + + +G + + + + ++ + Q ++V + +L++ + Sbjct: 17 VKNLAGPMAAVGGLFAMSADAIRYVFRRPFQWREFLEQSWFVAKVSLAPTVLVAIPFTVL 76 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 ++ L + GA S + + ++G L+T +++AG +A+ A++GS I EEI Sbjct: 77 VSFTLNILLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEI 136 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 A+ +G+D V+ L++PR+ A + LL L I+G D+ F + Sbjct: 137 SAMEVLGIDPVQRLVTPRMLASGLVALLLNSLVVIIGILGGYTFSVFIQDVNPGAFAAGI 196 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-GVHSNSLGKKVTTCVVQSISIVIII 360 + + +KA G+VA G V G + ++G V VV + + I Sbjct: 197 TLLTGVPEMIISCVKALLFGLIAGLVACYRGLTVSGGGAKAVGNAVNETVVYAFMALFAI 256 Query: 361 DSLFAIF 367 + L Sbjct: 257 NVLVTTV 263 >gi|282866016|ref|ZP_06275064.1| protein of unknown function DUF140 [Streptomyces sp. ACTE] gi|282559055|gb|EFB64609.1| protein of unknown function DUF140 [Streptomyces sp. ACTE] Length = 267 Score = 169 bits (429), Expect = 5e-40, Method: Composition-based stats. Identities = 45/242 (18%), Positives = 100/242 (41%), Gaps = 9/242 (3%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVIAQ 184 + +L + R + V + V+I ++ TG+V+ Sbjct: 13 QLTFYVRALVWIPRTLHRYLREVQRLLAEVAFGSGGLGVIGGTIGVMIAMTLATGSVVGL 72 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L Q G F+ + + REI L+ + ++ G+ A++G+M+INEE+DA+ Sbjct: 73 QGYAALDQIGTSAFTGFISAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVDAL 132 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ + L++ RI A ++++ L + S+ + + + + + F+ Sbjct: 133 EAMGVRSMPYLVTTRIIAGVVAIIPLYAIGLLSSYLASRYITVLFNGQSAGTYDHYFNLF 192 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + ++ ++K + + + GF +G V V +I ++ + D Sbjct: 193 LSPDDVLLSVLKVLIFSVLVILAHCYYGFHATGGPAGVGVAVGRSVRNAIVLISVTDFFL 252 Query: 365 AI 366 ++ Sbjct: 253 SL 254 >gi|324997538|ref|ZP_08118650.1| hypothetical protein PseP1_02178 [Pseudonocardia sp. P1] Length = 246 Score = 169 bits (429), Expect = 6e-40, Method: Composition-based stats. Identities = 58/245 (23%), Positives = 104/245 (42%), Gaps = 8/245 (3%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI-AQQG 186 A +LG V+ + G+ + Q++ V + + G Q Sbjct: 1 MAELLGRVVYSAVRHPV------GYWGDVRDQLFEVLKLCWFPMAVACVAFGFGAPGLQA 54 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 FG + +RE + A+++AG G+A+ A++G+ +I EEIDA+ Sbjct: 55 GNLFILFGIPERLGSFFVMASVREFAPWINAMVVAGVVGTAMTADLGARRIREEIDAMEV 114 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +G+D VR LI PRI A+ I L+ ++A ++G + D A F F S AT Sbjct: 115 LGIDPVRALILPRIIAVTIMTGLMDLIALSFGVLGGYLAA-IQLDAGSAAFQQNFFSNAT 173 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 +++ ++K IG+V +GF +G+ V VV + + + + +F Sbjct: 174 TIDLWGSVLKTTLFGLIIGVVCCYKGFRAQGGPAGVGRAVNQAVVIAFAAIWSFNFVFTT 233 Query: 367 FYFAI 371 + Sbjct: 234 ILLGL 238 >gi|300789440|ref|YP_003769731.1| ABC transporter permease [Amycolatopsis mediterranei U32] gi|299798954|gb|ADJ49329.1| ABC transport system permease protein [Amycolatopsis mediterranei U32] Length = 271 Score = 169 bits (428), Expect = 8e-40, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 95/242 (39%), Gaps = 9/242 (3%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---------VPVVILISFVTGAVIAQ 184 ++ A + ++R + V + V++ + TG + Sbjct: 17 QLLFYVRALAAVPLAVTRYFREVVRLLAEVTFGSGALAVIGGTIGVMVGLCVFTGVTVGL 76 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+Q + L + REI L+ + ++ GS A++G+M+I+EEIDA+ Sbjct: 77 QGFSALNQINISAMTGFLTAYFNTREIAPLVAGLALSSTVGSGFTAQLGAMRISEEIDAL 136 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M + + L++ RI A I++ L ++ + +G+ + ++ + F Sbjct: 137 EVMAVRSMPYLVTTRIVAGFIAIIPLYVIGLLISYLGSRLTTVVFFGQSGGTYDHYFTLF 196 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++ K + + + G+ +G V V SI ++ ++D Sbjct: 197 LPPGDVLWSFGKVLVFSVGVILTHCFYGYRASGGPAGVGVAVGRAVRTSIVLISVLDLFL 256 Query: 365 AI 366 ++ Sbjct: 257 SL 258 >gi|145223093|ref|YP_001133771.1| hypothetical protein Mflv_2506 [Mycobacterium gilvum PYR-GCK] gi|145215579|gb|ABP44983.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] Length = 269 Score = 169 bits (428), Expect = 8e-40, Method: Composition-based stats. Identities = 49/244 (20%), Positives = 102/244 (41%), Gaps = 5/244 (2%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + + ++++ FL Q ++V + +L++ +++ Sbjct: 23 MQAVGGFFSMALDAVRFVFVRPFQWREFL----EQSWFVAKVSMAPTLLVAIPFTVLVSF 78 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 L + GA S + + ++G L+T +++AG +A+ A++GS I EEIDA+ Sbjct: 79 TLNILLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEIDAM 138 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 +G++ V+ L++PR+ A + LL L I+G D+ F + Sbjct: 139 EVLGINPVQRLVTPRMLASGLVALLLNSLVVIIGILGGYFFSIFVQDVNPGAFAAGITLL 198 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + + +KA G+VA G G + ++G V VV + + +I+ + Sbjct: 199 TGVPEVIISCVKAALFGLIAGLVACYRGLTITGGGAKAVGNAVNETVVYAFMALFVINVV 258 Query: 364 FAIF 367 Sbjct: 259 VTAI 262 >gi|183984680|ref|YP_001852971.1| hypothetical protein MMAR_4712 [Mycobacterium marinum M] gi|183178006|gb|ACC43116.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length = 268 Score = 169 bits (428), Expect = 8e-40, Method: Composition-based stats. Identities = 47/240 (19%), Positives = 104/240 (43%), Gaps = 1/240 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G + + + + +++ + Q ++V + +L++ +++ Sbjct: 22 MQAVGGLFAMSADAIKFAFRRPFQWREFLEQSWFVARVAMLPTLLVAIPFTVLVSFTLNI 81 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L + GA S + + ++G L+T +++AG +A+ A++GS I EEIDA+ +G Sbjct: 82 LLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEIDAMEVLG 141 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ V+ L++PR+ A + LL L I+G + D+ F + + Sbjct: 142 INPVQRLVTPRMLASGLVALLLNSLVVIIGIVGGYVFSVFVQDVNPGAFAAGITLLTGVP 201 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + +KA G+VA G G + ++G V VV + + +++ + Sbjct: 202 EVIISCVKAALFGLIAGLVACYRGLTISGGGAKAVGNAVNETVVYAFMSLFVVNVVVTAI 261 >gi|289641746|ref|ZP_06473904.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] gi|289508390|gb|EFD29331.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] Length = 290 Score = 169 bits (428), Expect = 8e-40, Method: Composition-based stats. Identities = 50/250 (20%), Positives = 98/250 (39%), Gaps = 1/250 (0%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 G + + + + + Q + +S ++ + F+ G Sbjct: 33 RGVKQAVTTGGEIAQFSARTIRDFGDIRHYASEVFHQAGILILSSGLIIWSMQFIMGMQC 92 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + ++ L Q GA ++S + LRE+ + + A + G +VAEIGSM+I +EID Sbjct: 93 GLEASYTLKQIGAPLYSGIFNAYCSLREMAPYMYGYIFAAKVGCGLVAEIGSMRIADEID 152 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY-DIPFAVFFSRF 301 A+ MG+ L+ RI A I++P L + I +V + + F Sbjct: 153 AMEVMGVRSRSYLVGTRIMAAWIAMPFLFTVGLGLMYISMYLVTVVQLGGVSAGGYNYIF 212 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + +IK M I V+ G+ S +GK ++ ++ ++ +I Sbjct: 213 WLYQNPLDFLFSMIKMLSMGTTIVFVSCYYGYTASGGSVGVGKNTAKSMMLNMVLIHVIG 272 Query: 362 SLFAIFYFAI 371 L ++ + Sbjct: 273 LLTTQLFWGL 282 >gi|315443550|ref|YP_004076429.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|315261853|gb|ADT98594.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 269 Score = 169 bits (428), Expect = 8e-40, Method: Composition-based stats. Identities = 49/244 (20%), Positives = 102/244 (41%), Gaps = 5/244 (2%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + + ++++ FL Q ++V + +L++ +++ Sbjct: 23 MQAVGGFFSMALDAVRFVFVRPFQWREFL----EQSWFVAKVSMAPTLLVAIPFTVLVSF 78 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 L + GA S + + ++G L+T +++AG +A+ A++GS I EEIDA+ Sbjct: 79 TLNILLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEIDAM 138 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 +G++ V+ L++PR+ A + LL L I+G D+ F + Sbjct: 139 EVLGINPVQRLVTPRMLASGLVALLLNSLVVIIGILGGYFFSIFVQDVNPGAFAAGITLL 198 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + + +KA G+VA G G + ++G V VV + + +I+ + Sbjct: 199 TGVPEVIISCVKAALFGLIAGLVACYRGLTITGGGAKAVGNAVNETVVYAFMALFVINVV 258 Query: 364 FAIF 367 Sbjct: 259 VTAI 262 >gi|188995184|ref|YP_001929436.1| hypothetical protein PGN_1320 [Porphyromonas gingivalis ATCC 33277] gi|188594864|dbj|BAG33839.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC 33277] Length = 217 Score = 169 bits (428), Expect = 8e-40, Method: Composition-based stats. Identities = 53/208 (25%), Positives = 105/208 (50%), Gaps = 1/208 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +G + +++ LI+++ +GV V +VI+ISF GAVI Q + Sbjct: 5 TLQQIGEYTKLMQRTFSLPNRWRMSFRELIKEIDKLGVDSVWIVIIISFFIGAVITIQLS 64 Query: 188 FQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 ++ F+I + + L E + +++AG+ GS+I +E+G+M++ E+IDA+ Sbjct: 65 LNMTSPLIPRFTIGYSTREIILLEFSSTVMCLILAGKVGSSIASELGTMRVTEQIDAMEV 124 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +G++ LI P+I ++ +P+L+I++ + I+G + ++P + F + Sbjct: 125 IGVNSANYLILPKIIGFMLFVPVLSIISMSTGIVGGYLACSLVPNLPRSDFEYGLQLFFS 184 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFA 334 N+F +IK+ A I VA G+ Sbjct: 185 PYNVFYSIIKSVAYAFIISSVAGYYGYT 212 >gi|240170711|ref|ZP_04749370.1| hypothetical protein MkanA1_15455 [Mycobacterium kansasii ATCC 12478] Length = 255 Score = 168 bits (427), Expect = 9e-40, Method: Composition-based stats. Identities = 51/247 (20%), Positives = 108/247 (43%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + +G + + + + +K+ + Q ++V + +L++ ++ Sbjct: 5 DTVIKPLRSVGEFFAMSLDTLVAMFKWPFPWREFLLQSWFVARVSIIPTLLLAIPFTVLV 64 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 L +FGA FS + + +IG ++T +++AG +A+ A++G+ I++E+D Sbjct: 65 VFTLNILLVEFGAADFSGTGAATASVTQIGPIVTVLVVAGTGATAMCADLGARTIHDELD 124 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R MG+D +R L +PR+ A + L L + G+ + F + Sbjct: 125 ALRVMGVDPIRRLAAPRVLAATVVAVSLVSLVTLVGLAGSFAFSVFVQHVTPGAFAAGLT 184 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L + GL+K A ++A +G +VG +G V VV S + +I+ Sbjct: 185 LITHLPELILGLVKGALFGMAAALIACYKGISVGGGPQGVGNAVNETVVYSFIALFVINI 244 Query: 363 LFAIFYF 369 + ++ Sbjct: 245 VATAVFY 251 >gi|225011579|ref|ZP_03702017.1| protein of unknown function DUF140 [Flavobacteria bacterium MS024-2A] gi|225004082|gb|EEG42054.1| protein of unknown function DUF140 [Flavobacteria bacterium MS024-2A] Length = 245 Score = 168 bits (427), Expect = 9e-40, Method: Composition-based stats. Identities = 51/239 (21%), Positives = 97/239 (40%), Gaps = 2/239 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G K+K +++ + + + + +V ISF G V+A Q A L Sbjct: 7 IGNYFIMLKLTFGKFTKWKILKQLILKDIDTLIIGSLGIVSFISFFVGGVVAIQTALNLE 66 Query: 192 QFGAE-IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 + E ++++AG+ GS I + IG+M++ E+IDA+ MG++ Sbjct: 67 NPLLPKNLIGFAARQSIILEFAPTFISIIMAGKVGSYITSSIGTMRVTEQIDALEVMGIN 126 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 LI P+I +L + PL+ ++ F I G I A + +I Sbjct: 127 THNYLIFPKIVSLSL-YPLVICISMFLGIFGGYIAAVYGGFSSSADYIEGIQMDFIPFHI 185 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 IK F + + + G+ + + +GK T V + ++I+++ L Sbjct: 186 TYAFIKTSFFSFILATIPAYHGYYMNGGALEVGKASTVSFVWTSVVIILLNYLITQLLL 244 >gi|120437216|ref|YP_862902.1| ABC-type transporter permease protein [Gramella forsetii KT0803] gi|117579366|emb|CAL67835.1| ABC-type transporter permease protein [Gramella forsetii KT0803] Length = 245 Score = 168 bits (427), Expect = 9e-40, Method: Composition-based stats. Identities = 53/246 (21%), Positives = 101/246 (41%), Gaps = 2/246 (0%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + H +G K + +++ + + + +V +SF GAV+A Q Sbjct: 1 MTYLHSIGEYFIMLKGVFGRMTKGSVLRNLIFKEINELIMGSLGIVAFLSFFIGAVVAIQ 60 Query: 186 GAFQLSQFGAEIFSIDLMSI-LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 A L+ + + + E ++++AG+ GS I + IGSM++ E+IDA+ Sbjct: 61 TALNLNNPLIPKSLVAFAARQSVILEFAPTFISIIMAGKVGSFITSSIGSMRVTEQIDAL 120 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG++ LI P+I A +++ P L +A F I GA + F + Sbjct: 121 EVMGINSKNYLILPKIIA-MLTYPFLIAIAMFLGIAGAYFAAVFGGFVTSDQFLTGLQDD 179 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++ IK A + V G+ + + +G+ TT V + ++II + Sbjct: 180 FNGFHLTYAFIKTFLFAFILATVPSYHGYYMKGGALEVGEASTTSFVWTSVVLIITNYAI 239 Query: 365 AIFYFA 370 + Sbjct: 240 TQLLLS 245 >gi|326382400|ref|ZP_08204092.1| putative YrbE family protein [Gordonia neofelifaecis NRRL B-59395] gi|326199130|gb|EGD56312.1| putative YrbE family protein [Gordonia neofelifaecis NRRL B-59395] Length = 268 Score = 168 bits (427), Expect = 9e-40, Method: Composition-based stats. Identities = 47/208 (22%), Positives = 97/208 (46%) Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 VG V++++ GA I QG L G + + S RE+ ++ A+ A Sbjct: 52 VGGGTAVVLVILGMAVGASIGIQGYASLDLVGMGSLTGFISSYANTRELAPMIAAIGFAA 111 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 ++G + AEIGSM+I EEIDA+ +M + + ++S R+ A I ++ L I+ + + A Sbjct: 112 QAGCRLTAEIGSMRIAEEIDALESMAVRPIPYVVSTRVVAAITTIIPLYIVTLILSFVAA 171 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 +V+ + + F++ ++ +IK ++ IV +GF + + Sbjct: 172 KLVVILMHGQSGGTYDFYFNAFLKPQDLVFSVIKVLIFVVSVVIVHSYQGFYATGGAEGV 231 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+ + S+ ++++ D + + + Sbjct: 232 GRASGRAIRSSLIVIVVEDMILTLLMWG 259 >gi|262201204|ref|YP_003272412.1| hypothetical protein Gbro_1221 [Gordonia bronchialis DSM 43247] gi|262084551|gb|ACY20519.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247] Length = 349 Score = 168 bits (427), Expect = 1e-39, Method: Composition-based stats. Identities = 47/193 (24%), Positives = 89/193 (46%) Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G ++ Q ++Q GA+ +++ L +++ G SAI A++G+ Sbjct: 148 IPLGIIVTVQIGNIINQLGAQSLLGAGSGFAVIQQAAPLAAGMLLGGAGASAIAADLGAR 207 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 + EEIDA+RTMG+D V L+ PR+ A ++ PL+ + ++ A + + D+ Sbjct: 208 TVREEIDAMRTMGIDPVARLVVPRVLAAVVVAPLIALFIVLVGVLSAYYLAITFQDVGPG 267 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 ++ F S +++ +IF L KA I +V + G + V VV S Sbjct: 268 SYWQSFGSFSSVRDIFLALFKAVVFGFIIAVVGCQRGLEARGGPRGVADGVNATVVVSTV 327 Query: 356 IVIIIDSLFAIFY 368 +I ++ + + Y Sbjct: 328 GIIGVNLVLTLVY 340 >gi|311744212|ref|ZP_07718016.1| ABC superfamily ATP binding cassette transporter, membrane protein [Aeromicrobium marinum DSM 15272] gi|311312385|gb|EFQ82298.1| ABC superfamily ATP binding cassette transporter, membrane protein [Aeromicrobium marinum DSM 15272] Length = 279 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 104/256 (40%), Gaps = 10/256 (3%) Query: 120 KFINDSCSQAHILG-LVISNTGEFCASSYKFKGFLLSLIRQMYYV--GVSGV-------P 169 F+ + + LG +I + + + + + + V GV G+ Sbjct: 10 AFVTERRRRVETLGDQLIFYVKALAWTPRTVRLYRKEISKTLAEVVFGVGGISVIAGTVG 69 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V+ ++F G + G LS+ G F+ + + RE+ L+ A+ +A G Sbjct: 70 VIAFLAFFAGTGVGLNGYAALSEIGVAKFTAFISAYFNTREVAPLVAAIALAATVGCGYT 129 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A +G+M+I+EEIDA+ MG+ + L++ R+ A I++ L +A ++ + ++ Sbjct: 130 ARLGAMRISEEIDALEVMGVPSLPFLVTTRMIAAFIAVIPLYSVALVASYLAPRLITTLI 189 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 Y + F +I K +A I ++ G+ +G+ V Sbjct: 190 YGESAGTYDHYFIQFLPPGDILWSFFKLAVLAVGIILIHCYYGYTASDGPAGVGRAVGRA 249 Query: 350 VVQSISIVIIIDSLFA 365 + SI V++ D Sbjct: 250 IRTSIVFVVVTDFFLT 265 >gi|149370868|ref|ZP_01890463.1| hypothetical protein SCB49_04265 [unidentified eubacterium SCB49] gi|149355654|gb|EDM44212.1| hypothetical protein SCB49_04265 [unidentified eubacterium SCB49] Length = 245 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 53/240 (22%), Positives = 98/240 (40%), Gaps = 2/240 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G + K + +++ + + + +V ISF G VI Q A L+ Sbjct: 7 IGSYFLMLKKVFGGFTKGSVLRELIFKEIDDLVIGSLGIVAFISFFVGGVITIQTALNLT 66 Query: 192 QFGAE-IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 + E ++++AG+ GS I + IGSM++ E+IDA+ MG++ Sbjct: 67 NPLIPKSLIAYATRQSIILEFAPTFMSIIMAGKVGSFITSSIGSMRVTEQIDALEVMGIN 126 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 + L+ P+I A++ PL+ LA F I+G I F T ++ Sbjct: 127 SLNYLVFPKIVAMMF-YPLVIALAMFLGIVGGYIAGVYGGFTNSTDFGIGLRDTFEPFHL 185 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +K A I V +GF + + +GK T V + ++I+ + + + Sbjct: 186 VYAFVKTFIFAFIIATVPSWQGFYMKGGALEVGKASTNSFVWTSVLIILANYIVTQLLLS 245 >gi|326331672|ref|ZP_08197960.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] gi|325950471|gb|EGD42523.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] Length = 277 Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats. Identities = 45/208 (21%), Positives = 96/208 (46%) Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 VG + V++L+S G + +G L G + + RE+G L+ A+ + Sbjct: 61 VGGGTIGVMVLLSVSVGTSLGIEGFNGLELVGLAPLVGFISATANTRELGPLVAALALGA 120 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 + G A++G+M++NEE+DA+ M + V L++ R+ A ++++ L ++ + I + Sbjct: 121 QVGCRFTAQLGAMRVNEEVDALEVMSVRPVNYLVATRLVATMLAIVPLYVIGLLGSYIAS 180 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 + + F F T+ +I LIK A + ++ G AV S ++ Sbjct: 181 ESTVVMLFGQSPGQFDHYFLEFLTMRDIGFSLIKILIFAAIVVLIHCWYGLAVSAGSLNV 240 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+ + S ++++++ L + + Sbjct: 241 GEATGRSIRASFVVIVVLNMLLTVAMWG 268 >gi|326330430|ref|ZP_08196738.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] gi|325951705|gb|EGD43737.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] Length = 287 Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats. Identities = 55/253 (21%), Positives = 113/253 (44%), Gaps = 2/253 (0%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + +D S LG + + S + + ++RQ + + ++ + + Sbjct: 27 MGGYSDGSSLIADLGGIALFGIQIVKSMPDVRHYGTEVLRQAGIIILKSTFIIWFMMCML 86 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 A IA + + L+Q GA ++ S + + +++ + +VAE+GSM+I+ Sbjct: 87 AAEIALEAHYLLAQLGAGGYTAVFSSTADYT-VAPEMWGWILSAKVACGLVAELGSMRIS 145 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN-FSAIIGASIVIWKYYDIPFAVF 297 EEIDA+ MG+D L++ R+ A++I P + + I+G + ++ ++ + + Sbjct: 146 EEIDALDVMGIDSRAYLVNTRVLAMVIVTPFMFVAGTGLMYILGYYMNVYLFHSVSAGGY 205 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 S F S ++ LI+A M I +V GF +GK +V ++ IV Sbjct: 206 LSVFWSFTAQQDLILSLIQATIMGLLIVLVGCYYGFNASGGPVGVGKATAKSMVINLVIV 265 Query: 358 IIIDSLFAIFYFA 370 + ++F +F Sbjct: 266 SALGAVFQQLFFG 278 >gi|118466063|ref|YP_881276.1| TrnB1 protein [Mycobacterium avium 104] gi|254774784|ref|ZP_05216300.1| TrnB1 protein [Mycobacterium avium subsp. avium ATCC 25291] gi|118167350|gb|ABK68247.1| TrnB1 protein [Mycobacterium avium 104] Length = 255 Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats. Identities = 54/239 (22%), Positives = 107/239 (44%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + E A++ + ++ Q+++V + I++S +I Sbjct: 10 MTALGQFFLLSAEALAAAVRGPWAWREILEQIWFVARVSIFPTIMLSIPYTVLIVFVLNI 69 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L + GA S + + ++G ++TA++++G +A+ A++G+ I EEIDA++ +G Sbjct: 70 LLVEIGAGDLSGAGAGLASVTQVGPVVTAMVVSGAGSTAMCADLGARTIREEIDAMKVIG 129 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ V+ L+ PRI A +L + + + G+ I + + F + L Sbjct: 130 VNPVQALVVPRIIAATFVAVMLYAVVAVTGLTGSYIFVVFVQHVTPGAFVAGMTLVTGLP 189 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + LIKA + G++A +G +VG +G V VV S + I+ L Sbjct: 190 QVVISLIKATLFGLSAGLIACYKGLSVGGGPTGVGNAVNETVVFSFMALFFINILTTAL 248 >gi|298208113|ref|YP_003716292.1| hypothetical protein CA2559_07665 [Croceibacter atlanticus HTCC2559] gi|83850754|gb|EAP88622.1| hypothetical protein CA2559_07665 [Croceibacter atlanticus HTCC2559] Length = 233 Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats. Identities = 50/216 (23%), Positives = 100/216 (46%), Gaps = 2/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE-IFSIDLMSILQLREIGVL 214 +++++ + +S + +V ISF GAV++ Q A L+ + E Sbjct: 19 ILKEIDDLIMSSLGIVTFISFFIGAVVSIQTALNLNNPLIPKELIGFAARQSIILEFAPT 78 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +V++AG+ GS I + IG+M++ E+IDA+ MG++ + L+ P+I A++I P L +A Sbjct: 79 FISVIMAGKVGSYITSSIGTMRVTEQIDALEVMGINSLNYLVLPKIVAMMI-YPFLIGIA 137 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 F I+GA + + + F S ++ +K A + V G+ Sbjct: 138 MFIGILGAYMAGVYGGFLGSSEFLSGLQDDFISFHLVYAFLKTFLFAFILATVPAYHGYY 197 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + +G+ T V + ++II + + + Sbjct: 198 MKGGALEVGQASTQSFVWTSVVIIITNYVLTQVLLS 233 >gi|41408215|ref|NP_961051.1| hypothetical protein MAP2117c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396570|gb|AAS04434.1| hypothetical protein MAP_2117c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 255 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 54/239 (22%), Positives = 106/239 (44%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + E A++ + ++ Q+++V + I++S +I Sbjct: 10 MTALGQFFLLSAEALAAAVRGPWAWREILEQIWFVARVSIFPTIMLSIPYTVLIVFVLNI 69 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L + GA S + + ++G ++TA++++G +A+ A++G+ I EEIDA++ +G Sbjct: 70 LLVEIGAGDLSGAGAGLASVTQVGPVVTAMVVSGAGSTAMCADLGARTIREEIDAMKVIG 129 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ V+ L+ PRI A +L + + G+ I + + F + L Sbjct: 130 VNPVQALVVPRIIAATFVAVMLYAVVAVIGLTGSYIFVVFVQHVTPGAFVAGMTLVTGLP 189 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + LIKA + G++A +G +VG +G V VV S + I+ L Sbjct: 190 QVVISLIKATLFGLSAGLIACYKGLSVGGGPTGVGNAVNETVVFSFMALFFINILTTAL 248 >gi|312138208|ref|YP_004005544.1| integral membrane protein yrbe2a [Rhodococcus equi 103S] gi|311887547|emb|CBH46859.1| putative integral membrane protein YrbE2A [Rhodococcus equi 103S] Length = 275 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 47/243 (19%), Positives = 101/243 (41%), Gaps = 4/243 (1%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + + ++ + F + Q ++V + +L++ +++ Sbjct: 30 LRAAGGFFAMSADTLRAVFSRPFQRREF----VDQAWFVARVSMVPTVLVAIPFTVLVSF 85 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 L + GA S ++ + ++G ++T +++AG +AI A++ + I EEIDA+ Sbjct: 86 TINILLREIGAADLSGAGAALGAVTQVGPIVTVLIVAGAGATAICADLAARTIREEIDAM 145 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R +G++ + L+ PR+ A + LL L I+G + D+ F + Sbjct: 146 RVLGINPIHRLVVPRVLASTVVALLLNGLVCTIGILGGFLFSVYVQDVNPGAFVNGITLL 205 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + ++KA G++A G V + S+G V VV S + +++ L Sbjct: 206 TGFGELMISMLKAGLFGMIAGLMAAYLGMNVRGGAKSVGDAVNQTVVFSFMALFVVNVLV 265 Query: 365 AIF 367 Sbjct: 266 TAV 268 >gi|54027606|ref|YP_121848.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54019114|dbj|BAD60484.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 287 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 110/277 (39%), Gaps = 6/277 (2%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 S + + + ++ H + + + G + ++ + L+ + Sbjct: 3 STYVPPLLRPLQQLKRSAQAPVDLIARIGHQVFFFLRSVGSIPLALKQYPKEVWRLLTDV 62 Query: 161 ------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 VG + VV+++S G + QG L+ G + + + RE+G L Sbjct: 63 TWGNGNLVVGGGTIGVVVILSAFGGMTVGIQGHTSLNLLGLSPITGAISAFATTRELGPL 122 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 L ++ A ++G A++G+M+I+EEIDA+ ++ + + L+S R++A I+++ L L Sbjct: 123 LASLAFAAQAGCRFTAQLGAMRISEEIDALESVAIRPLPYLVSTRMFAAIVAIVPLYCLG 182 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 A I ++ + D + F+ ++ L+KA + GF Sbjct: 183 LAVAYISCALTVQLVGDTAEGTYQHYFYQFLIPTDVLYSLLKAILFVAITTFIQCYYGFF 242 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +G + I +V+ D + + + Sbjct: 243 ASGGPEGVGVAAGRAIKMCIILVVFADLFMTLAIWGV 279 >gi|193215869|ref|YP_001997068.1| hypothetical protein Ctha_2170 [Chloroherpeton thalassium ATCC 35110] gi|193089346|gb|ACF14621.1| protein of unknown function DUF140 [Chloroherpeton thalassium ATCC 35110] Length = 264 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 70/247 (28%), Positives = 126/247 (51%), Gaps = 3/247 (1%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 +G+ + + + VI++ +F + L L+RQ+ + G + Sbjct: 7 FLEQLGQNVRSSLRAYITFLSFAAAVIASFPKFFKQTQ---VGYLVLLRQVLFTGYEALS 63 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +V+LIS G +I +G L+ FG ++ + RE+ LLTA +I RSG+AI Sbjct: 64 IVVLISVSIGGLIILEGYSILANFGQSDLLYVILVSVITRELSNLLTAFIIVARSGTAIA 123 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 E+G+M +N EIDA+ ++G+ + L+ PR +++SL +L + N + I+G +V + Sbjct: 124 TELGNMVVNHEIDALLSIGISPISYLVVPRTIGVVVSLLVLNVYFNITGILGGWMVSNWF 183 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 Y I F VFFS+ + TL +I ++K+ AI I++ G V S + ++ Sbjct: 184 YPIDFNVFFSKLLAKLTLVDISASILKSMLFGFAIAIISSFHGLQVNFASTEVPQRTIRA 243 Query: 350 VVQSISI 356 VV S+++ Sbjct: 244 VVYSLTM 250 >gi|240170399|ref|ZP_04749058.1| hypothetical protein MkanA1_13895 [Mycobacterium kansasii ATCC 12478] Length = 247 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 104/240 (43%), Gaps = 1/240 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G + + + + ++ + Q ++V + +L++ +++ Sbjct: 1 MQAVGGLFAMSADAIKFVFRRPFQWREFLEQSWFVARVSMAPTLLVAIPFTVLVSFTLNI 60 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L + GA S + + ++G L+T +++AG +A+ A++GS I EEIDA+ +G Sbjct: 61 LLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEIDAMEVLG 120 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ V+ L++PR+ A + LL L I+G + D+ F + + Sbjct: 121 INPVQRLVTPRMLASGLVALLLNSLVVIIGILGGYVFSVFVQDVNPGAFAAGITLLTGVP 180 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAV-GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + +KA G+VA G V G + ++G V VV + + +++ + Sbjct: 181 EVIISCVKAALFGLIAGLVACYRGLTVSGGGAKAVGNAVNETVVYAFMSLFVVNVVVTAI 240 >gi|86143923|ref|ZP_01062291.1| hypothetical protein MED217_03715 [Leeuwenhoekiella blandensis MED217] gi|85829630|gb|EAQ48093.1| hypothetical protein MED217_03715 [Leeuwenhoekiella blandensis MED217] Length = 245 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 47/240 (19%), Positives = 94/240 (39%), Gaps = 2/240 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +GL K +++++ + + + +V ISF G V+A Q A + Sbjct: 7 IGLYFMMLKGVFIKPTKTSVLRNLVLKEIDDLIIGSLGIVCFISFFVGGVVAIQTALNMD 66 Query: 192 Q-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 + + E ++++AG+ S I + IG+M++ E+IDA+ MG++ Sbjct: 67 NPILPKSLIGFASRQSIILEFAPTFISIIMAGKVSSFITSSIGTMRVTEQIDALEVMGIN 126 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 + L+ P+I A++ P + +A F I+G F + Sbjct: 127 SLNYLVFPKIIAMLF-YPFVIAIAMFLGILGGYTAAVLGGFATGDQFIQGLQEDFVPFQL 185 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 IK A + + G+ + + +GK TT V + +I+ + L + Sbjct: 186 VYAFIKTFVFAILLATIPSYFGYYMKGGALEVGKASTTSFVWTSVFIILSNYLITQLLLS 245 >gi|163786261|ref|ZP_02180709.1| hypothetical protein FBALC1_13787 [Flavobacteriales bacterium ALC-1] gi|159878121|gb|EDP72177.1| hypothetical protein FBALC1_13787 [Flavobacteriales bacterium ALC-1] Length = 245 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 44/231 (19%), Positives = 96/231 (41%), Gaps = 2/231 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 H +G + K+ +++ + + + + +V I+F G V+A Q + Sbjct: 4 LHNIGAYFIMIKDIFRKPTKWSVMKTLILKDIDDLIIGSLGIVAFIAFFVGGVVAIQTSL 63 Query: 189 QLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 ++ + + E ++++AG+ GS I + IG+M++ E+IDA+ M Sbjct: 64 NINNPLIPKYLVGFATRQSIILEFAPTFISIIMAGKVGSFITSSIGTMRVTEQIDALEVM 123 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ + L+ P+ AL + P + +A F ++G + + + Sbjct: 124 GINAINYLVFPKFIALTL-YPFVISIAMFLGVLGGMVACVYGGYGTLEDYIQGIQTDFIP 182 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 +I IK A + + G+ + + +GK TT V + ++I Sbjct: 183 FHIVYAFIKTLVFAFILATIPSFYGYFMKGGALEVGKASTTSFVWTSVVII 233 >gi|331699195|ref|YP_004335434.1| hypothetical protein Psed_5448 [Pseudonocardia dioxanivorans CB1190] gi|326953884|gb|AEA27581.1| protein of unknown function DUF140 [Pseudonocardia dioxanivorans CB1190] Length = 280 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 107/269 (39%), Gaps = 6/269 (2%) Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY----- 162 + + ++ L L + +++G + L+ ++ + Sbjct: 3 TAFGTRTRRALRGPLDQLAELGDQLSLYARAIAWIPRTVRRYRGEIARLLAEVSFGSGAL 62 Query: 163 -VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221 V + V+ +S G+++ QG L G E + + + R+I L+ A + Sbjct: 63 IVILGTAGVMAALSLFVGSLVGLQGFRALDSLGVEALTGFITAYFNTRDIAPLVAASALT 122 Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281 G+ A++G+M+I+EE+DA+ M + V L++ R+ A +I++ + + ++ + Sbjct: 123 ATLGAGFTAQLGAMRISEEVDALEVMAVPSVPFLVTTRVIAGMIAVIPMYTIGLLASFVA 182 Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341 + + + +P + F ++++ +K + I ++ G+ Sbjct: 183 SRLNVTVVNGLPGGTYDHYFDLFLPVSDVLFSYLKVIVFSVVIILIHCHYGYRAKGGPAG 242 Query: 342 LGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +G V V SI ++D + + Sbjct: 243 VGVAVGRAVRLSIVSTAVLDFFLTLVIYG 271 >gi|312137895|ref|YP_004005231.1| integral membrane protein yrbe1a [Rhodococcus equi 103S] gi|311887234|emb|CBH46543.1| putative integral membrane protein YrbE1A [Rhodococcus equi 103S] Length = 258 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 55/247 (22%), Positives = 110/247 (44%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + +++G + + + + L ++Q ++G +L+ G +A Sbjct: 5 ALQGGYLIGFSVQAMVSLARALLRGRLSLEETVKQTLFIGRVSTGPSLLLMVPIGVFVAV 64 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 + GA +S +++ + + + L+ A+M+AG +GSAI ++GS KI EEIDA+ Sbjct: 65 SVGELAGRIGAGGYSGAVVAFIIVGQASALVCALMMAGVAGSAICTDLGSRKIREEIDAM 124 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+D V L++PR+ A ++ L + F ++ + +P F + F Sbjct: 125 EVMGIDVVERLVAPRLLAAVVVSVALCAMVTFGGVMACYLYHIYVQHLPAGTFLATFGQY 184 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A+ L+KA A +VA +G + V VV + ++V ++++ Sbjct: 185 GRTADFVMALVKAAIFALTSTLVATFKGLHAKGGPRGVADAVNEAVVIAFALVFVVNTAL 244 Query: 365 AIFYFAI 371 + Y I Sbjct: 245 SALYTVI 251 >gi|326383822|ref|ZP_08205507.1| hypothetical protein SCNU_12842 [Gordonia neofelifaecis NRRL B-59395] gi|326197586|gb|EGD54775.1| hypothetical protein SCNU_12842 [Gordonia neofelifaecis NRRL B-59395] Length = 286 Score = 166 bits (422), Expect = 4e-39, Method: Composition-based stats. Identities = 47/274 (17%), Positives = 111/274 (40%), Gaps = 10/274 (3%) Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYV--- 163 ++ + + ++ + S G ++ + + + +IRQ+ V Sbjct: 4 ADVSARVERGYRNRMDTAVSGLVRFGEYVTFVVRAVRAVPFTLIHYRKHVIRQIAEVTFG 63 Query: 164 ------GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 G + +V+ +S A++ + L G S L +I RE+ ++ A Sbjct: 64 NKSLLSGGGTIGIVLAMSLAAAAMLGIETYRGLQLVGMTSMSGMLAAIANTRELAPVVVA 123 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 + +A + G+ A+IG+M+I++EI A+ M + V L + R+ A ++ + + ++ + Sbjct: 124 IALAAKVGTGFTAQIGAMRISDEIAALDAMAIRSVPFLATTRMIAAMVCVLPIYMVGLLA 183 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 + + +V+ Y+ + FH T ++ KA A + +V G+ Sbjct: 184 SYVATRLVVVWYHGESSGTYDYFFHLALTPTDLLYSATKAVVFAAIVTLVHCSYGYFASG 243 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +G+ + SI + + D + + + Sbjct: 244 GPEGVGQAAGRALRTSILSIGVFDVILTFGLWGL 277 >gi|163754162|ref|ZP_02161285.1| hypothetical protein KAOT1_21107 [Kordia algicida OT-1] gi|161326376|gb|EDP97702.1| hypothetical protein KAOT1_21107 [Kordia algicida OT-1] Length = 233 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 48/232 (20%), Positives = 96/232 (41%), Gaps = 2/232 (0%) Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198 + K+ + + + + + + +V ISF G V++ Q A ++ + Sbjct: 2 LQSVFSKMTKWSMLRKLIFKDIDDLIIGSMGIVCFISFFVGGVVSIQTALNMNNPLIPKY 61 Query: 199 -SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 + E ++++AG+ GS I + IG+M++ E+IDA+ MG++ + L+ Sbjct: 62 LVGFATRQSVILEFAPTFISIIMAGKVGSFITSSIGTMRVTEQIDALEVMGVNSLNYLVF 121 Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 P+I AL + P + +A F I G + A F ++ IK Sbjct: 122 PKIIALSL-YPFVITIAMFLGIFGGWLASIYGGFSTSADFIQGLQIEFIPFHVTYAFIKT 180 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 A + + G+ + + +GK TT V + ++I+I+ L Sbjct: 181 FVFAFVLATIPSFYGYYMKGGALEVGKASTTSFVWTSVVIILINYLITQLLL 232 >gi|169628106|ref|YP_001701755.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977] gi|169240073|emb|CAM61101.1| Putative YrbE family protein [Mycobacterium abscessus] Length = 285 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 51/276 (18%), Positives = 111/276 (40%), Gaps = 7/276 (2%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 S + I ++ K + I+ + +K FL L Sbjct: 4 STYVPPIARPFVGIYNRVQKPVTRLGHMVAFFFRAIAGVPIVLR--HYWKEFLRHLSDIA 61 Query: 161 Y-----YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 + VG V+I++ + G ++A +G L G + + S++ RE+ ++ Sbjct: 62 WGNGSLVVGGGTAGVMIVLGVIAGGLVAIEGYNFLDLLGLGPATGIISSLVNTRELAPIM 121 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A+ A ++G A++G+M+I+EEIDA+ ++ + + L++ R+ A I+ L + Sbjct: 122 AAIAFATQAGCRFTAQLGAMRISEEIDAMDSIAIRPIPYLVTTRLMAAIVVTIPLYVACL 181 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 + + +++ + F + +I +IKA + GF Sbjct: 182 AVSYLSCQVMVGIMSGGSIGSYLHYFGIGVSGIDIVYSVIKAIIFVWIASTIQCYYGFYA 241 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +G + +I++VIII+ L + +++ Sbjct: 242 SGGPEGVGVAAGHAMRAAITLVIIINMLLTMALWSV 277 >gi|326382401|ref|ZP_08204093.1| hypothetical protein SCNU_05666 [Gordonia neofelifaecis NRRL B-59395] gi|326199131|gb|EGD56313.1| hypothetical protein SCNU_05666 [Gordonia neofelifaecis NRRL B-59395] Length = 245 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 50/218 (22%), Positives = 104/218 (47%) Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209 + ++ Q ++V IL++ G +++ Q Q GA + + ++ Sbjct: 18 RFPFREVVVQTWFVITVTTLPAILVAIPFGVIVSVQVGSLTQQVGATSIAGAAGGLGIIQ 77 Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 + ++TA+++ G +GSAI +++G+ + EEIDA+ T+GL+ R +++PR A++I P+ Sbjct: 78 QGAPIVTALLLGGAAGSAIASDLGARTVREEIDAMETLGLNPTRRVVAPRFVAVLIVAPM 137 Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329 L +L F+ ++ I+ I + + F S A+ A+I LIK+ + +A Sbjct: 138 LCMLIVFTGLVAGYILSVNVQGITPGSYVASFASFASSADIVVALIKSVVFGLVVVAIAC 197 Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 G + + + V VV + +I+ + Sbjct: 198 HRGLSTKGGPKGVAESVNATVVLGVVACFVINVVITQL 235 >gi|325674886|ref|ZP_08154573.1| membrane protein YrbE4A [Rhodococcus equi ATCC 33707] gi|325554472|gb|EGD24147.1| membrane protein YrbE4A [Rhodococcus equi ATCC 33707] Length = 263 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 47/243 (19%), Positives = 101/243 (41%), Gaps = 4/243 (1%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + + ++ + F + Q ++V + +L++ +++ Sbjct: 18 LRAAGGFFAMSADTLRAVFSRPFQRREF----VDQAWFVARVSMVPTVLVAIPFTVLVSF 73 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 L + GA S ++ + ++G ++T +++AG +AI A++ + I EEIDA+ Sbjct: 74 TINILLREIGAADLSGAGAALGAVTQVGPIVTVLIVAGAGATAICADLAARTIREEIDAM 133 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R +G++ + L+ PR+ A + LL L I+G + D+ F + Sbjct: 134 RVLGINPIHRLVVPRVLASTVVALLLNGLVCTIGILGGFLFSVYVQDVNPGAFVNGITLL 193 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + ++KA G++A G V + S+G V VV S + +++ L Sbjct: 194 TGFGELMISMLKAGLFGMIAGLMAAYLGMNVRGGAKSVGDAVNQTVVFSFMALFVVNVLV 253 Query: 365 AIF 367 Sbjct: 254 TAV 256 >gi|54024947|ref|YP_119189.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54016455|dbj|BAD57825.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 287 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 55/248 (22%), Positives = 111/248 (44%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + ++ + + L + T A + L + Q ++ + ILIS G Sbjct: 30 RILSAVRTFGRTVRLGVRATVLAVADLAAGRFPLREAVVQAWFFASVSLLPAILISLPMG 89 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 VIA Q GA + + + +++I L A+++ G SAI +++G+ I E Sbjct: 90 VVIAVQVGSLTENVGAGSMAGAVGGMGVMQQIAPLAAALLVGGAGASAIASDLGARTIRE 149 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDA+RTMG+D R L++PR+ A+ + P+L +L +I+ + +V + ++ Sbjct: 150 EIDALRTMGIDPHRRLVAPRVVAMTVVAPMLAVLVILMSILASFLVASVGQGVAPGSYWL 209 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 F S A++ ++ L K+ + ++A + G + V VV + ++ Sbjct: 210 SFGSFASVTDLVICLGKSAVFGYLVAVIASQRGLQAQGGPKGVADCVNAAVVLGLLACLV 269 Query: 360 IDSLFAIF 367 ++ + Sbjct: 270 VNLIITQI 277 >gi|169631107|ref|YP_001704756.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977] gi|169243074|emb|CAM64102.1| Putative YrbE family protein [Mycobacterium abscessus] Length = 320 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 59/307 (19%), Positives = 130/307 (42%), Gaps = 4/307 (1%) Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 +L+ + + + S + + P I + + ++ Sbjct: 4 VAADARLEPAADDWTETPDVESGSKSEDDHTSDPAAGALPQLLDRAPRLIKRPVAYAVSQ 63 Query: 125 SCSQAHILG----LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + S LG LV+ + + + + + Q +++ V IL+S G Sbjct: 64 TDSMLKTLGRYVDLVVQSFAFLISDIVRLRHPWQDTVIQSWFILTVTVVPAILVSIPFGV 123 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 ++A Q +SQ GA S + +++ ++ A+++ G +GSA+ ++G+ I EE Sbjct: 124 IVAVQAGSIISQVGASSISGAAGGLGVIQQGAPIVAALLLGGAAGSAVATDLGARSIREE 183 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +DA+R MG++ V+ L++PR+ A++ PLL I F I +V + + S Sbjct: 184 VDAMRVMGVNPVQRLVTPRLAAILFVSPLLCIFIIFVGIFAGYLVNVGFQGGTPGSYLSS 243 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 F + A ++++ ++K + +VA + G + + V VV + V+++ Sbjct: 244 FAAFANVSDVTVAVLKTWLFGVVVILVACQRGLEAKGGARGVADAVNATVVIGVVTVMVL 303 Query: 361 DSLFAIF 367 +++ Sbjct: 304 NTVITQI 310 >gi|41407947|ref|NP_960783.1| hypothetical protein MAP1849 [Mycobacterium avium subsp. paratuberculosis K-10] gi|254775059|ref|ZP_05216575.1| hypothetical protein MaviaA2_10356 [Mycobacterium avium subsp. avium ATCC 25291] gi|41396301|gb|AAS04166.1| hypothetical protein MAP_1849 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 286 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 57/236 (24%), Positives = 105/236 (44%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + F + +RQ ++ + V IL+S ++ Q A Q GA Sbjct: 45 VRTIQYFFYDLITGRFQWQEFVRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGA 104 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 + + +R+ L+ AV++A GSAI A++GS + EE DA+ MG+ VR L Sbjct: 105 TSLAGAASGLAVIRQGASLVAAVLMASAVGSAITADLGSRTMREETDAMEVMGVSVVRRL 164 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PR A ++ LT + F+ + + + + F S F S AT ++ L+ Sbjct: 165 VVPRFAAAVMIGVALTGVVCFAGFFASYMFNVYFQNGAPGSFVSTFASFATTGDMILALL 224 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 KA + IV+ ++G + + V VV++I +++I++ + Y + Sbjct: 225 KAIVFGAIVAIVSSQKGLSTKGGPTGVANSVNAAVVEAILLLMIVNVAISQLYIML 280 >gi|330875108|gb|EGH09257.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. glycinea str. race 4] Length = 148 Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats. Identities = 39/146 (26%), Positives = 79/146 (54%), Gaps = 1/146 (0%) Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 SA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA IS+P+L ++ + I GAS V Sbjct: 1 SALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFSVVGIWGASWV 60 Query: 286 IWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 + + F+S ++ + ++ G+IK+ A + +A+ +G+ S + + Sbjct: 61 AIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCEPTSEGISR 120 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + V+ +D + F Sbjct: 121 ATTRTVVYASLAVLGLDFILTALMFG 146 >gi|54022502|ref|YP_116744.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54014010|dbj|BAD55380.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 263 Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats. Identities = 49/230 (21%), Positives = 97/230 (42%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G + + +S + I Q +++ + +L++ +++ Sbjct: 18 LRAVGGFFELSADVARASVRRPFQAREFIDQSWFIARVSIVPTLLVAIPFTVLVSFTLNI 77 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L + GA S + + ++G ++T +++AG +AI A++G+ I EEIDA+R +G Sbjct: 78 LLREIGAADLSGAGAAFGAVTQVGPIVTVLIVAGAGATAICADLGARTIREEIDAMRVLG 137 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ V+ L+ PR+ A + +L L I+G + D+ F + L Sbjct: 138 INPVQRLVVPRVLASMFVALMLNSLVCTIGIVGGFLFSVYLQDVNPGAFVNGITLLTHLP 197 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + +KA G+VA G V S+G V VV + + Sbjct: 198 ELIISEVKAGLFGLIAGLVACYLGLNVKGGPKSVGDAVNQTVVFAFMALF 247 >gi|254819657|ref|ZP_05224658.1| hypothetical protein MintA_07029 [Mycobacterium intracellulare ATCC 13950] Length = 280 Score = 166 bits (420), Expect = 7e-39, Method: Composition-based stats. Identities = 56/236 (23%), Positives = 105/236 (44%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + F + +RQ ++ + V IL+S ++ Q A Q GA Sbjct: 39 VRTVQYFFVDLITGRFQWHEFVRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGA 98 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 + + +R+ L+ AV++A GSAI A++GS + EE DA+ MG+ +R L Sbjct: 99 TSLAGAASGLAVIRQGASLVAAVLMASAVGSAITADLGSRTMREETDAMEVMGVSVIRRL 158 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PR A ++ LT + F+ + + + + F S F S AT ++ L+ Sbjct: 159 VVPRFAAAVMIGVALTGVVCFAGFFASYMFNVYFQNGAPGSFVSTFASFATTGDMVLALL 218 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 KA + IV+ ++G + + V VV++I +++I++ + Y + Sbjct: 219 KAIVFGAIVAIVSSQKGLSTKGGPTGVANSVNAAVVEAILLLMIVNVAISQLYIML 274 >gi|323436128|ref|ZP_01050723.2| ABC transporter, permease protein [Dokdonia donghaensis MED134] gi|321496443|gb|EAQ38641.2| ABC transporter, permease protein [Dokdonia donghaensis MED134] Length = 233 Score = 165 bits (419), Expect = 7e-39, Method: Composition-based stats. Identities = 51/229 (22%), Positives = 96/229 (41%), Gaps = 2/229 (0%) Query: 143 CASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE-IFSID 201 K K + +++ + + + +V ISF G V+A Q A L+ Sbjct: 6 FVKPTKGKVLSDLIFKEIDDLIIGSLGIVAFISFFVGGVVAIQTALNLNNPLIPKSLIGF 65 Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261 + E ++++AG+ GS I + IG+M++ E+IDA+ MG++ + LI P+I Sbjct: 66 AARQSVILEFAPTFISIIMAGKVGSFITSSIGTMRVTEQIDALEVMGINSLNYLIFPKIV 125 Query: 262 ALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMA 321 A+++ P + +A F IIGA F S +F K A Sbjct: 126 AMLV-YPFVIAIAMFLGIIGAYTAAVYGGFTSNDAFLSGLQEDFIPFQLFYAFFKTFLFA 184 Query: 322 CAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + G+ + + +GK TT V + +I+++ + + Sbjct: 185 FLLATIPSYHGYFMRGGALEVGKASTTSFVWTSVAIILVNFIVTQLLLS 233 >gi|120405106|ref|YP_954935.1| hypothetical protein Mvan_4152 [Mycobacterium vanbaalenii PYR-1] gi|119957924|gb|ABM14929.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 269 Score = 165 bits (419), Expect = 8e-39, Method: Composition-based stats. Identities = 49/244 (20%), Positives = 102/244 (41%), Gaps = 5/244 (2%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + + ++++ FL Q ++V + +L++ +++ Sbjct: 23 MAAVGGFFSMALDAVRFVFVRPFQWREFL----EQCWFVARVSMAPTLLVAIPFTVLVSF 78 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 L + GA S + + ++G L+T +++AG +A+ A++GS I EEIDA+ Sbjct: 79 TLNILLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEIDAM 138 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 +G++ V+ L++PR+ A + LL L I+G D+ F + Sbjct: 139 EVLGINPVQRLVTPRMLAAGLVALLLNSLVVIIGILGGYFFSVFVQDVNPGAFAAGITLL 198 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + + +KA G+VA G G + ++G V VV + + +I+ + Sbjct: 199 TGVPEVIISCVKAALFGLIAGLVACYRGLTITGGGAKAVGNAVNETVVYAFMALFVINVV 258 Query: 364 FAIF 367 Sbjct: 259 VTAI 262 >gi|308810118|ref|XP_003082368.1| unnamed protein product [Ostreococcus tauri] gi|116060836|emb|CAL57314.1| unnamed protein product [Ostreococcus tauri] Length = 361 Score = 165 bits (419), Expect = 8e-39, Method: Composition-based stats. Identities = 48/210 (22%), Positives = 97/210 (46%), Gaps = 5/210 (2%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 KF+ + + A + G V+ + ++Q+ VG + V +L S G Sbjct: 105 KFLWRATATALLFGSVLY---RLVREPK--RVNWEQTLQQIARVGPQTLGVSLLTSSFVG 159 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V Q + ++ G + L+ + RE+ ++ A+++ GR GS+I AE+G+M++ E Sbjct: 160 MVFTIQFCKEFAKVGLKNAIGGLLGLAFARELTPVICAIVLTGRIGSSIAAELGTMQVTE 219 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++D + +G D V L+ PR+ A ISLP+L++L+ ++ + ++ Y + V Sbjct: 220 QVDQLTVLGTDPVDYLVIPRVIACSISLPILSVLSFAQSLGASILLADLRYGVSPNVIID 279 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAM 329 ++I K+ I ++ Sbjct: 280 SVAKYVEPSDIGVMAAKSIAFGAVIAAISC 309 >gi|126662313|ref|ZP_01733312.1| hypothetical protein FBBAL38_03140 [Flavobacteria bacterium BAL38] gi|126625692|gb|EAZ96381.1| hypothetical protein FBBAL38_03140 [Flavobacteria bacterium BAL38] Length = 233 Score = 165 bits (419), Expect = 9e-39, Method: Composition-based stats. Identities = 47/231 (20%), Positives = 100/231 (43%), Gaps = 2/231 (0%) Query: 141 EFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF-S 199 E K+ +++++ + + + +V ISF G V+A Q A L+ F Sbjct: 4 EIFNKPTKWSVMKQLILKEVDDLIIGSLGIVSFISFFVGGVVAIQTALNLTNPLIPKFLI 63 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 + E ++++AG+ GS I + IG+M++ E+IDA+ MG++ + L+ P+ Sbjct: 64 GFATRQSVILEFAPTFISIIMAGKMGSFITSSIGTMRVTEQIDALEVMGVNSLNYLVFPK 123 Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319 I AL++ P + L+ F + G + F + + +I IK Sbjct: 124 IIALLL-YPFVIGLSMFLGVFGGWMAAVYGGFTTSFEFTTGLQTEFIPFHIAYAFIKTIV 182 Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 A + + G+ + + +G+ T V + ++I+++ + + Sbjct: 183 FALLLATIPSFHGYYMKGGALEVGQASTVSFVWTSVVIILMNFILTQLLLS 233 >gi|108798492|ref|YP_638689.1| hypothetical protein Mmcs_1522 [Mycobacterium sp. MCS] gi|119867593|ref|YP_937545.1| hypothetical protein Mkms_1545 [Mycobacterium sp. KMS] gi|108768911|gb|ABG07633.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119693682|gb|ABL90755.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] Length = 271 Score = 165 bits (418), Expect = 9e-39, Method: Composition-based stats. Identities = 50/243 (20%), Positives = 107/243 (44%), Gaps = 4/243 (1%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + + + ++ FL Q ++V + ++++ ++ Sbjct: 27 IRALGGFFAMALDTLVTIPRRPFAWREFL----EQSWFVARVSLVPTLMLAIPFTVLLIF 82 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 L +FGA F+ + + +IG ++T +++AG +A+ A++G+ I +E+DA+ Sbjct: 83 TFNILLLEFGAADFAGTGAAYGTVTQIGPVVTVLVVAGAGATAMCADLGARTIRDELDAL 142 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R MG+D ++ L+ PR+ A + LL+ + ++G + F S Sbjct: 143 RVMGVDPIQTLVVPRVLAATVVATLLSSVVILVGLVGGFAFSVFVQHVTPGAFISGLTVI 202 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + A++ LIKA A G++A +G +VG +G V VV + + I+ + Sbjct: 203 TSAADVVISLIKAALFGLAAGLIACYKGISVGGGPAGVGNAVNETVVFTFVALFAINIIA 262 Query: 365 AIF 367 + Sbjct: 263 SAV 265 >gi|295135743|ref|YP_003586419.1| ABC-type transporter permease protein [Zunongwangia profunda SM-A87] gi|294983758|gb|ADF54223.1| ABC-type transporter permease protein [Zunongwangia profunda SM-A87] Length = 225 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 49/216 (22%), Positives = 98/216 (45%), Gaps = 2/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI-LQLREIGVL 214 + +++ + + + +V +SF GAV+A Q A L+ + + + E Sbjct: 11 IFKEIDELIIGSLGIVCFLSFFIGAVVAIQTALNLNNPLIPKSLVAFAARQSVILEFSPT 70 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 ++++AG+ GS I + IGSM++ E+IDA+ MG++ LI P+I A +++ P + ++ Sbjct: 71 FISIIMAGKVGSFITSSIGSMRVTEQIDALEVMGINSKNYLIFPKIIA-MLTYPFVIAIS 129 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 F I+GA + + F S ++ IK A + V G+ Sbjct: 130 MFLGILGAYVAAVLGGFVKPDDFVSGLQDDFVTFHLIYAFIKTFLFAFILATVPAYHGYY 189 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + +G+ TT V + ++II + + Sbjct: 190 MKGGALEVGQASTTAFVWTSVVLIITNYATTQLLLS 225 >gi|226364205|ref|YP_002781987.1| YrbE family protein [Rhodococcus opacus B4] gi|226242694|dbj|BAH53042.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 254 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 50/239 (20%), Positives = 101/239 (42%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G + +GE + + + Q ++V + +L++ +++ Sbjct: 9 LRAVGGFFTMSGETLRAVFSRPFQRREFVDQAWFVARVSMVPTVLVAIPFTVLVSFTINI 68 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L + GA S ++ + ++G ++T +++AG +AI A++ + I EEIDA+R +G Sbjct: 69 LLREIGAADLSGAGAALGTVTQVGPIVTVLIVAGAGATAICADLSARTIREEIDAMRVLG 128 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ + L+ PR+ A + LL L I+G + D+ F + Sbjct: 129 INPIHRLVVPRVLASTVVALLLNGLVCTIGILGGFVFSVYIQDVNPGAFVNGITLLTGFG 188 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + +KA G+VA G V + S+G V VV S + +++ L Sbjct: 189 ELVISEVKAGLFGMIAGLVAAYLGLNVKGGAKSVGDAVNQTVVFSFMALFVVNVLVTAV 247 >gi|118469944|ref|YP_887173.1| hypothetical protein MSMEG_2853 [Mycobacterium smegmatis str. MC2 155] gi|118171231|gb|ABK72127.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length = 270 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 45/246 (18%), Positives = 104/246 (42%), Gaps = 1/246 (0%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + + +G + + + + +++ + Q ++V + +L++ ++ Sbjct: 18 GGTSTTLEAIGGLFAMSSDAVRFAFRRPFQGREFLEQSWFVARVSLAPTLLVAIPFTVLV 77 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + L + GA S + + ++G ++T +++AG +A+ A++GS I +EID Sbjct: 78 SFTLNILLRELGAADLSGAGAAFGAVTQVGPMVTVLIVAGAGATAMCADLGSRTIRDEID 137 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +G++ ++ L++PRI A + LL L I+G + F + Sbjct: 138 AMEVLGINPIQRLVTPRILASGLVALLLNSLVVIIGILGGYTFSVFIQGVNPGAFAAGIT 197 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISIVIIID 361 + + IKA G+VA G G + ++G V VV + + +++ Sbjct: 198 LLTGVPEVIISCIKAMLFGFIAGMVACFRGLTIAGGGAKAVGNAVNETVVYAFMALFVVN 257 Query: 362 SLFAIF 367 + Sbjct: 258 VVVTAI 263 >gi|261415551|ref|YP_003249234.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372007|gb|ACX74752.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 292 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 60/275 (21%), Positives = 118/275 (42%), Gaps = 14/275 (5%) Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162 L + +G I+K ++ L + S+ FK ++I Q ++ Sbjct: 11 KMTPVGRLFHTLGIFILK-----TRMGQLIALFLRTVASLFDKSHNFKSDSRNIILQTFF 65 Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 GV P + ++ + G V+ + + G L+ ++ +RE+ + TA +IAG Sbjct: 66 TGVEIFPPLFAVATLFGTVVIIYLFSLMGKMGFSNNIGFLIVVIIIRELSPIFTAFLIAG 125 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 R+GS++ IGSM IN E+DA+ TMG++ +R L+ P + I++ ++ I+ + SAI Sbjct: 126 RTGSSLTTYIGSMVINSEVDALATMGINPIRYLVMPSVIGGTIAMIIMNIIFSTSAIGAG 185 Query: 283 SIVIWKYYDIPFAV--------FFSR-FHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 ++ I + S T + ++K I I A + Sbjct: 186 FLLTKGIIFITGNAPNVQITWSYLSTEIIKALTKPDFVFAIVKPLIFGIIITINACYQAL 245 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + + K + V+ S ++ D+LF +++ Sbjct: 246 NIKRDIRQVPKATSRSVIMSFLYIVFTDALFLMYF 280 >gi|254441414|ref|ZP_05054907.1| conserved domain protein [Octadecabacter antarcticus 307] gi|198251492|gb|EDY75807.1| conserved domain protein [Octadecabacter antarcticus 307] Length = 551 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 72/198 (36%), Positives = 108/198 (54%), Gaps = 2/198 (1%) Query: 99 QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158 IG + GL +S +F+ L +L+ Sbjct: 10 PAPVVAGGLIEWVADIGSSTTNAVKFVLKLIGYFGLFLSRLARSIRHPKEFR--LTALVH 67 Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 VG+ VP+V L++F+ G V+A QG+ QL QFGAE+F +DL+++ LRE+G+LLT++ Sbjct: 68 HCQEVGLKAVPIVALMAFLIGVVLAFQGSTQLKQFGAEVFVVDLIAVYILRELGILLTSI 127 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++AGR+ SA A IGSMK+ EEIDA+R++GLD IL PRI AL++ LP+L ++AN Sbjct: 128 IVAGRTASAFTAAIGSMKMREEIDAMRSLGLDPATILFVPRILALVLMLPILGLVANVMG 187 Query: 279 IIGASIVIWKYYDIPFAV 296 + G + DI Sbjct: 188 LFGDPMAAQVPVDINGHT 205 >gi|126436761|ref|YP_001072452.1| hypothetical protein Mjls_4189 [Mycobacterium sp. JLS] gi|126236561|gb|ABN99961.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 285 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 59/261 (22%), Positives = 109/261 (41%), Gaps = 14/261 (5%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVI 172 V +QA + E ++G L +I QM + V +V Sbjct: 21 VAGWRRIGAQARFYAKTLGAMWEALV---YYRGETLRMIAQMGLGAGALAMIGGTVGIVG 77 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 ++ G+++ QG LS G E + + + + R + L + ++ G+ A++ Sbjct: 78 FLTLTAGSLVTIQGYSSLSDIGVEALTGFVSAYVNGRIVTPLTAVISLSATIGAGTTAQL 137 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 G+M+INEEIDA+ MG+ V L S R+ A +I + L +A + + + A YY Sbjct: 138 GAMRINEEIDALEVMGIRSVAYLASTRVIAGVIVVIPLYCIAVWMSFMSARFATTVYYGQ 197 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 ++ F + ++I L +A M + +V GF +G+ V V Sbjct: 198 ATGIYDHYFSTFLQPSDILWSLFQAVLMGFVVMLVHTYYGFTASGGPAGVGEAVGRAVRT 257 Query: 353 SISIVIIIDSLFAIFYFAIGI 373 S+ ++F I + ++ I Sbjct: 258 SLIA-----AVFVILFASLAI 273 >gi|215404242|ref|ZP_03416423.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis 02_1987] gi|218753676|ref|ZP_03532472.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis GM 1503] gi|253798988|ref|YP_003031989.1| hypothetical protein TBMG_02026 [Mycobacterium tuberculosis KZN 1435] gi|254550984|ref|ZP_05141431.1| hypothetical protein Mtube_11066 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|297634533|ref|ZP_06952313.1| hypothetical protein MtubK4_10441 [Mycobacterium tuberculosis KZN 4207] gi|253320491|gb|ACT25094.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis KZN 1435] Length = 269 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 107/253 (42%), Gaps = 4/253 (1%) Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 G+ + + + + + + ++ +LL Q ++V +L+ Sbjct: 14 GRVADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLL----QCWFVARVSTLPGVLM 69 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 + + L+ GA FS +I + + ++T +++AG +A+ A++G+ Sbjct: 70 TIPWAVISGFLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGA 129 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 I EE+DA+R MG++ ++ L +PR+ A L + + +IGA + Sbjct: 130 RTIREELDALRVMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSA 189 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 + + + ++ +IKA G++A +G +VG +G+ V VV + Sbjct: 190 GAWVTGLTTLTHTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAF 249 Query: 355 SIVIIIDSLFAIF 367 ++ +I+ + Sbjct: 250 IVLFVINIVVTAV 262 >gi|183983837|ref|YP_001852128.1| YrbE family protein, YrbE5A [Mycobacterium marinum M] gi|183177163|gb|ACC42273.1| YrbE family protein, YrbE5A [Mycobacterium marinum M] Length = 289 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 61/276 (22%), Positives = 116/276 (42%), Gaps = 5/276 (1%) Query: 97 KPQRSFFYNSFKNLHYHIGKKIVKFIN-DSCSQAHILG----LVISNTGEFCASSYKFKG 151 +P+ + + + IG ++ + +G L + F + Sbjct: 4 QPEPALLGSRNDDGVAAIGDWAAGYVRRHPLAALTTVGEQFVLGVRTIQYFFVDLVTGRF 63 Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211 +RQ ++ + V IL+S ++ Q A Q GA + + +R+ Sbjct: 64 QWQEFVRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGATSLAGAASGLAVIRQG 123 Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271 L+ AV++A GSAI A++GS + EE DA+ MG+ +R L+ PR A I+ LT Sbjct: 124 ASLVAAVLMASAVGSAITADLGSRTMREETDAMEVMGVSVIRRLVVPRFAAAIMIGVALT 183 Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 + F + + + + F + F S AT ++F L KA + +V+ ++ Sbjct: 184 GVVCFVGFFASYMFNVYFQNGAPGSFVATFASFATTDDMFLALFKAVIFGAIVAVVSAQK 243 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 G + + V VV+SI +++I++ + Sbjct: 244 GLSTKGGPTGVANSVNAAVVESILVLMIVNVSISQL 279 >gi|15609101|ref|NP_216480.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis H37Rv] gi|15841439|ref|NP_336476.1| hypothetical protein MT2016 [Mycobacterium tuberculosis CDC1551] gi|148661773|ref|YP_001283296.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis H37Ra] gi|167970514|ref|ZP_02552791.1| conserved hypothetical integral membrane protein YrbE3A [Mycobacterium tuberculosis H37Ra] gi|215411646|ref|ZP_03420442.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis 94_M4241A] gi|215427323|ref|ZP_03425242.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis T92] gi|215430874|ref|ZP_03428793.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis EAS054] gi|215446167|ref|ZP_03432919.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis T85] gi|219557918|ref|ZP_03536994.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis T17] gi|254232134|ref|ZP_04925461.1| hypothetical integral membrane protein yrbE3A [Mycobacterium tuberculosis C] gi|254364783|ref|ZP_04980829.1| hypothetical integral membrane protein yrbE3A [Mycobacterium tuberculosis str. Haarlem] gi|260186935|ref|ZP_05764409.1| hypothetical protein MtubCP_13013 [Mycobacterium tuberculosis CPHL_A] gi|260201057|ref|ZP_05768548.1| hypothetical protein MtubT4_13279 [Mycobacterium tuberculosis T46] gi|289443448|ref|ZP_06433192.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis T46] gi|289447581|ref|ZP_06437325.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis CPHL_A] gi|289554259|ref|ZP_06443469.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis KZN 605] gi|289570054|ref|ZP_06450281.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis T17] gi|289746097|ref|ZP_06505475.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis 02_1987] gi|289750548|ref|ZP_06509926.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis T92] gi|289754061|ref|ZP_06513439.1| integral membrane protein [Mycobacterium tuberculosis EAS054] gi|289758074|ref|ZP_06517452.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|289762119|ref|ZP_06521497.1| hypothetical integral membrane protein yrbE3A [Mycobacterium tuberculosis GM 1503] gi|294996886|ref|ZP_06802577.1| hypothetical protein Mtub2_20868 [Mycobacterium tuberculosis 210] gi|297731521|ref|ZP_06960639.1| hypothetical protein MtubKR_10546 [Mycobacterium tuberculosis KZN R506] gi|298525458|ref|ZP_07012867.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|306776196|ref|ZP_07414533.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu001] gi|306784727|ref|ZP_07423049.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu003] gi|306803683|ref|ZP_07440351.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu008] gi|306968080|ref|ZP_07480741.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu009] gi|306972305|ref|ZP_07484966.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu010] gi|307080016|ref|ZP_07489186.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu011] gi|307084590|ref|ZP_07493703.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu012] gi|308369573|ref|ZP_07418314.2| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu002] gi|308372102|ref|ZP_07427406.2| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu004] gi|308373284|ref|ZP_07431721.2| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu005] gi|308374452|ref|ZP_07436104.2| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu006] gi|308375733|ref|ZP_07444925.2| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu007] gi|313658854|ref|ZP_07815734.1| hypothetical protein MtubKV_10556 [Mycobacterium tuberculosis KZN V2475] gi|2950434|emb|CAA17837.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE3A [Mycobacterium tuberculosis H37Rv] gi|13881678|gb|AAK46290.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|124601193|gb|EAY60203.1| hypothetical integral membrane protein yrbE3A [Mycobacterium tuberculosis C] gi|134150297|gb|EBA42342.1| hypothetical integral membrane protein yrbE3A [Mycobacterium tuberculosis str. Haarlem] gi|148505925|gb|ABQ73734.1| conserved hypothetical integral membrane protein YrbE3A [Mycobacterium tuberculosis H37Ra] gi|289416367|gb|EFD13607.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis T46] gi|289420539|gb|EFD17740.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis CPHL_A] gi|289438891|gb|EFD21384.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis KZN 605] gi|289543808|gb|EFD47456.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis T17] gi|289686625|gb|EFD54113.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis 02_1987] gi|289691135|gb|EFD58564.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis T92] gi|289694648|gb|EFD62077.1| integral membrane protein [Mycobacterium tuberculosis EAS054] gi|289709625|gb|EFD73641.1| hypothetical integral membrane protein yrbE3A [Mycobacterium tuberculosis GM 1503] gi|289713638|gb|EFD77650.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|298495252|gb|EFI30546.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308215376|gb|EFO74775.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu001] gi|308327131|gb|EFP15982.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu002] gi|308330567|gb|EFP19418.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu003] gi|308334401|gb|EFP23252.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu004] gi|308338197|gb|EFP27048.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu005] gi|308341892|gb|EFP30743.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu006] gi|308345381|gb|EFP34232.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu007] gi|308349684|gb|EFP38535.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu008] gi|308354314|gb|EFP43165.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu009] gi|308358256|gb|EFP47107.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu010] gi|308362184|gb|EFP51035.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu011] gi|308365841|gb|EFP54692.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu012] gi|323719529|gb|EGB28655.1| hypothetical protein TMMG_01225 [Mycobacterium tuberculosis CDC1551A] gi|326903571|gb|EGE50504.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis W-148] gi|328458743|gb|AEB04166.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis KZN 4207] Length = 265 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 107/253 (42%), Gaps = 4/253 (1%) Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 G+ + + + + + + ++ +LL Q ++V +L+ Sbjct: 10 GRVADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLL----QCWFVARVSTLPGVLM 65 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 + + L+ GA FS +I + + ++T +++AG +A+ A++G+ Sbjct: 66 TIPWAVISGFLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGA 125 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 I EE+DA+R MG++ ++ L +PR+ A L + + +IGA + Sbjct: 126 RTIREELDALRVMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSA 185 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 + + + ++ +IKA G++A +G +VG +G+ V VV + Sbjct: 186 GAWVTGLTTLTHTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAF 245 Query: 355 SIVIIIDSLFAIF 367 ++ +I+ + Sbjct: 246 IVLFVINIVVTAV 258 >gi|15828391|ref|NP_302654.1| hypothetical protein ML2587 [Mycobacterium leprae TN] gi|221230868|ref|YP_002504284.1| hypothetical protein MLBr_02587 [Mycobacterium leprae Br4923] gi|13093821|emb|CAC32119.1| conserved membrane protein [Mycobacterium leprae] gi|219933975|emb|CAR72687.1| conserved membrane protein [Mycobacterium leprae Br4923] Length = 267 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 48/243 (19%), Positives = 100/243 (41%), Gaps = 4/243 (1%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +++ ++++ F+L Q +++ +++S ++ Sbjct: 21 LVLVGGFFRMLVLTGKALFRRPFQWREFIL----QCWFIMRVAFLPTVMVSIPLTVLLIF 76 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 L+QF A S +I + ++G L T +++AG ++I A++G+ I EEIDA+ Sbjct: 77 TLNVLLAQFSAADLSGAGAAIGAVTQLGPLTTVLVVAGAGSTSICADLGARTIREEIDAM 136 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 +G+D + L+ PR+ A + LL L ++G + ++ + + + Sbjct: 137 EVLGIDPIHRLVVPRVLAATLVATLLNGLVITVGLVGGYLFGVYLQNVSGGAYLATLTTI 196 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L + +KA G+V G V SN LG V VV + + ++ + Sbjct: 197 TGLPEVVIATVKAATFGLIAGLVGCYRGLIVRGGSNGLGAAVNETVVLCVVALYAVNVVL 256 Query: 365 AIF 367 Sbjct: 257 TTI 259 >gi|111023084|ref|YP_706056.1| hypothetical protein RHA1_ro06121 [Rhodococcus jostii RHA1] gi|110822614|gb|ABG97898.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length = 286 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 53/256 (20%), Positives = 103/256 (40%), Gaps = 10/256 (3%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVSG------- 167 + LG + G A + ++RQ+ + G Sbjct: 11 HWVRARARQPLDLMTGLGREFTFYGSVIAGVPLAIVKYWRHIMRQIGDISFGGATLLAGG 70 Query: 168 --VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 + VV +S V + +G L G S L +IL RE+ ++ ++ +A + G Sbjct: 71 GAIGVVFAMSAVAATQVGIEGLRGLDLLGMGSLSGLLSAILNTRELAPVIASIALAAKVG 130 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 + A++G+M+I+EEI A+ M + + L S R+ + +I + L ++ S+ + + +V Sbjct: 131 TGFTAQLGAMRISEEISALDAMAIRSLPFLASTRLVSCLICVVPLYVVGLLSSYLASRLV 190 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 I + + FH T ++ +KA A I +V G+ +G+ Sbjct: 191 IVTFGGQSAGTYDYYFHLMLTPTDVAYSFVKAVVFATIIALVHCSYGYHAHGGPEGVGRA 250 Query: 346 VTTCVVQSISIVIIID 361 + SI + I+D Sbjct: 251 AGRALRTSILAIGIVD 266 >gi|41410180|ref|NP_963016.1| hypothetical protein MAP4082 [Mycobacterium avium subsp. paratuberculosis K-10] gi|254776985|ref|ZP_05218501.1| hypothetical protein MaviaA2_20271 [Mycobacterium avium subsp. avium ATCC 25291] gi|41399014|gb|AAS06632.1| hypothetical protein MAP_4082 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 265 Score = 165 bits (417), Expect = 2e-38, Method: Composition-based stats. Identities = 43/241 (17%), Positives = 92/241 (38%), Gaps = 4/241 (1%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + + ++++ I Q +++ + + ++ +I Sbjct: 21 AVGGFFRTCVLTGKALFRRPFQWR----ETIEQGWFITSVSLLPTLAVAIPLTVLIIFTL 76 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 L++FGA S ++ + ++G L T ++IAG +AI A++G+ I EEIDA+ Sbjct: 77 NILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGSTAICADLGARTIREEIDALEV 136 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +G+D + L+ PR+ A I LL ++G + I + Sbjct: 137 LGIDPIHRLVVPRVVAATIVATLLNGAVITIGLVGGFVFGVFIQHISAGAYVGTLTLITG 196 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L + ++K+ G+V G +G V +V + + ++ + Sbjct: 197 LPEVVISVVKSATFGTIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFAVNVVLTT 256 Query: 367 F 367 Sbjct: 257 I 257 >gi|111021668|ref|YP_704640.1| hypothetical protein RHA1_ro04696 [Rhodococcus jostii RHA1] gi|110821198|gb|ABG96482.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length = 254 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 50/239 (20%), Positives = 101/239 (42%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G + +GE + + + Q ++V + +L++ +++ Sbjct: 9 LRAVGGFFTMSGETLRAVFSRPFQRREFVDQAWFVARVSMVPTVLVAIPFTVLVSFTINI 68 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L + GA S ++ + ++G ++T +++AG +AI A++ + I EEIDA+R +G Sbjct: 69 LLREIGAADLSGAGAALGTVTQVGPIVTVLIVAGAGATAICADLSARTIREEIDAMRVLG 128 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ + L+ PR+ A + LL L I+G + D+ F + Sbjct: 129 INPIHRLVVPRVLASTVVALLLNGLVCTIGILGGFVFSVYIQDVNPGAFVNGITLLTGFG 188 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + +KA G+VA G V + S+G V VV S + +++ L Sbjct: 189 ELVISEVKAGLFGMIAGLVAAYLGLNVRGGAKSVGDAVNQTVVFSFMALFVVNVLVTAV 247 >gi|118462658|ref|YP_881590.1| hypothetical protein MAV_2390 [Mycobacterium avium 104] gi|118163945|gb|ABK64842.1| conserved hypothetical protein [Mycobacterium avium 104] Length = 286 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 56/236 (23%), Positives = 104/236 (44%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + F + +RQ ++ + V IL+S ++ Q A Q GA Sbjct: 45 VRTIQYFFYDLITGRFQWQEFVRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGA 104 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 + + +R+ L+ AV++A GSAI A++GS + EE DA+ MG+ VR L Sbjct: 105 TSLAGAASGLAVIRQGASLVAAVLMASAVGSAITADLGSRTMREETDAMEVMGVSVVRRL 164 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PR A ++ LT + F+ + + + + F S S AT ++ L+ Sbjct: 165 VVPRFAAAVMIGVALTGVVCFAGFFASYMFNVYFQNGAPGSFVSTSASFATTGDMILALL 224 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 KA + IV+ ++G + + V VV++I +++I++ + Y + Sbjct: 225 KAIVFGAIVAIVSSQKGLSTKGGPTGVANSVNAAVVEAILLLMIVNVAISQLYIML 280 >gi|300865114|ref|ZP_07109939.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] gi|300336885|emb|CBN55089.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] Length = 290 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 63/252 (25%), Positives = 112/252 (44%), Gaps = 2/252 (0%) Query: 120 KFINDSCSQAHI--LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + +++ + + G+ K K +I + VG+ + V+LI+ Sbjct: 32 RAFDETLEDRWFQRFFVTLLLGGQVWLRLLKGKVCRKLVIEHLVTVGLGSLRAVLLIALF 91 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G + Q A +L +FGA +I RE+ +LTA ++AG+ GS AEIG M++ Sbjct: 92 AGMIFTIQSARELIRFGAVGAVGGAFAIAFCRELAPVLTAGVVAGQVGSGFAAEIGEMQV 151 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++DA+ + + V L+ PR+ A I LP+LTI + I G + +Y +P +F Sbjct: 152 TEQVDALYMLKTNPVDYLVLPRVVACCIMLPILTIFSVVVGIGGGAFAAAIFYHLPPGMF 211 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + ++ T ++K IGI+ G +G+ T VV S + Sbjct: 212 LESVRTFLEPWDLVTVVVKGVIFGAIIGIIGCGWGLTTTGGGKGVGRSATAAVVTSWVSI 271 Query: 358 IIIDSLFAIFYF 369 + D ++ F Sbjct: 272 FMADFFLSLLMF 283 >gi|118466592|ref|YP_883684.1| hypothetical protein MAV_4553 [Mycobacterium avium 104] gi|118167879|gb|ABK68776.1| conserved hypothetical protein [Mycobacterium avium 104] Length = 260 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 43/241 (17%), Positives = 92/241 (38%), Gaps = 4/241 (1%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + + ++++ I Q +++ + + ++ +I Sbjct: 16 AVGGFFRTCVLTGKALFRRPFQWR----ETIEQGWFITSVSLLPTLAVAIPLTVLIIFTL 71 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 L++FGA S ++ + ++G L T ++IAG +AI A++G+ I EEIDA+ Sbjct: 72 NILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGSTAICADLGARTIREEIDALEV 131 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +G+D + L+ PR+ A I LL ++G + I + Sbjct: 132 LGIDPIHRLVVPRVVAATIVATLLNGAVITIGLVGGFVFGVFIQHISAGAYVGTLTLITG 191 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L + ++K+ G+V G +G V +V + + ++ + Sbjct: 192 LPEVVISVVKSATFGTIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFAVNVVLTT 251 Query: 367 F 367 Sbjct: 252 I 252 >gi|120403833|ref|YP_953662.1| hypothetical protein Mvan_2849 [Mycobacterium vanbaalenii PYR-1] gi|119956651|gb|ABM13656.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 270 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 104/249 (41%), Gaps = 1/249 (0%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + +G ++S + + ++ + Q ++V + +L++ Sbjct: 15 ALGAGMAAPMQGVGGLLSMSADAVKFLFRRPFQGREFLEQSWFVARVSLMPTLLVAIPFT 74 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 +++ L + GA S + + ++G ++T +++AG +A+ A++GS I E Sbjct: 75 VLVSFTLNILLRELGAADLSGAGAAFGAVTQVGPMVTVLIVAGAGATAMCADLGSRTIRE 134 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDA+ +G++ V+ L++PR+ A + LL L I+G + F + Sbjct: 135 EIDALEVLGINPVQRLVTPRMLASGLVALLLNSLVVIIGILGGYFFSIFIQGVNPGAFAA 194 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISIVI 358 + + +KA G+VA G + G + ++G V VV + + Sbjct: 195 GITLLTGVPEVIISCVKAALFGLIAGLVACYRGLSISGGGAKAVGNAVNETVVYAFMALF 254 Query: 359 IIDSLFAIF 367 +++ + Sbjct: 255 VVNVVVTAI 263 >gi|226365583|ref|YP_002783366.1| YrbE family protein [Rhodococcus opacus B4] gi|226244073|dbj|BAH54421.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 286 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 53/256 (20%), Positives = 104/256 (40%), Gaps = 10/256 (3%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVSG------- 167 + + LG + G A + ++RQ+ + G Sbjct: 11 HWVRARVRQPLGLMTGLGREFTFYGSVIAGVPLAVVKYWRHIMRQIGDISFGGATLLAGG 70 Query: 168 --VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 + VV +S V + +G L G S L +IL RE+ ++ ++ +A + G Sbjct: 71 GAIGVVFAMSAVAATQVGIEGLRGLDLLGMGSLSGLLSAILNTRELAPVIASIALAAKVG 130 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 + A++G+M+I+EEI A+ M + + L S R+ + +I + L ++ S+ + + +V Sbjct: 131 TGFTAQLGAMRISEEISALDAMAIPSLPFLASTRLVSCLICVVPLYVVGLLSSYLASRLV 190 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 I + + FH T ++ +KA A I +V G+ +G+ Sbjct: 191 IVTFSGQSAGTYDYYFHLMLTPTDVAYSFVKAVVFATIIALVHCSYGYHAYGGPEGVGRA 250 Query: 346 VTTCVVQSISIVIIID 361 + SI + I+D Sbjct: 251 AGRALRTSILAIGIVD 266 >gi|15607727|ref|NP_215101.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis H37Rv] gi|15839989|ref|NP_335026.1| hypothetical protein MT0616 [Mycobacterium tuberculosis CDC1551] gi|31791769|ref|NP_854262.1| integral membrane protein YrbE2a [Mycobacterium bovis AF2122/97] gi|121636505|ref|YP_976728.1| integral membrane protein YrbE2a [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660356|ref|YP_001281879.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis H37Ra] gi|148821789|ref|YP_001286543.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis F11] gi|167969010|ref|ZP_02551287.1| hypothetical integral membrane protein yrbE2A [Mycobacterium tuberculosis H37Ra] gi|215402355|ref|ZP_03414536.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis 02_1987] gi|215410128|ref|ZP_03418936.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis 94_M4241A] gi|215425819|ref|ZP_03423738.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis T92] gi|215444700|ref|ZP_03431452.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis T85] gi|218752227|ref|ZP_03531023.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis GM 1503] gi|219556429|ref|ZP_03535505.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis T17] gi|224988977|ref|YP_002643664.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253797521|ref|YP_003030522.1| hypothetical protein TBMG_00594 [Mycobacterium tuberculosis KZN 1435] gi|254230927|ref|ZP_04924254.1| hypothetical integral membrane protein yrbE2A [Mycobacterium tuberculosis C] gi|254363545|ref|ZP_04979591.1| hypothetical integral membrane protein yrbE2A [Mycobacterium tuberculosis str. Haarlem] gi|254549542|ref|ZP_05139989.1| hypothetical protein Mtube_03615 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185464|ref|ZP_05762938.1| hypothetical protein MtubCP_05434 [Mycobacterium tuberculosis CPHL_A] gi|260199592|ref|ZP_05767083.1| hypothetical protein MtubT4_05534 [Mycobacterium tuberculosis T46] gi|260203751|ref|ZP_05771242.1| hypothetical protein MtubK8_05499 [Mycobacterium tuberculosis K85] gi|289441976|ref|ZP_06431720.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis T46] gi|289446140|ref|ZP_06435884.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis CPHL_A] gi|289552840|ref|ZP_06442050.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis KZN 605] gi|289568520|ref|ZP_06448747.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis T17] gi|289573187|ref|ZP_06453414.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis K85] gi|289744301|ref|ZP_06503679.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis 02_1987] gi|289749084|ref|ZP_06508462.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis T92] gi|289756666|ref|ZP_06516044.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|289760706|ref|ZP_06520084.1| hypothetical integral membrane protein yrbE2A [Mycobacterium tuberculosis GM 1503] gi|294996099|ref|ZP_06801790.1| hypothetical protein Mtub2_16765 [Mycobacterium tuberculosis 210] gi|297633081|ref|ZP_06950861.1| hypothetical protein MtubK4_03105 [Mycobacterium tuberculosis KZN 4207] gi|297730059|ref|ZP_06959177.1| hypothetical protein MtubKR_03150 [Mycobacterium tuberculosis KZN R506] gi|298524074|ref|ZP_07011483.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|306774691|ref|ZP_07413028.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu001] gi|306781579|ref|ZP_07419916.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu002] gi|306783229|ref|ZP_07421551.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu003] gi|306787601|ref|ZP_07425923.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu004] gi|306794365|ref|ZP_07432667.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu005] gi|306796335|ref|ZP_07434637.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu006] gi|306802195|ref|ZP_07438863.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu008] gi|306806402|ref|ZP_07443070.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu007] gi|306966602|ref|ZP_07479263.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu009] gi|306970795|ref|ZP_07483456.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu010] gi|307078518|ref|ZP_07487688.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu011] gi|307083082|ref|ZP_07492195.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu012] gi|313657386|ref|ZP_07814266.1| hypothetical protein MtubKV_03140 [Mycobacterium tuberculosis KZN V2475] gi|2222771|emb|CAB09951.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE2A [Mycobacterium tuberculosis H37Rv] gi|13880131|gb|AAK44840.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|31617356|emb|CAD93464.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE2A [Mycobacterium bovis AF2122/97] gi|121492152|emb|CAL70617.1| Conserved hypothetical integral membrane protein yrbE2A [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124599986|gb|EAY58996.1| hypothetical integral membrane protein yrbE2A [Mycobacterium tuberculosis C] gi|134149059|gb|EBA41104.1| hypothetical integral membrane protein yrbE2A [Mycobacterium tuberculosis str. Haarlem] gi|148504508|gb|ABQ72317.1| conserved hypothetical integral membrane protein YrbE2a [Mycobacterium tuberculosis H37Ra] gi|148720316|gb|ABR04941.1| hypothetical integral membrane protein yrbE2A [Mycobacterium tuberculosis F11] gi|224772090|dbj|BAH24896.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253319024|gb|ACT23627.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis KZN 1435] gi|289414895|gb|EFD12135.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis T46] gi|289419098|gb|EFD16299.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis CPHL_A] gi|289437472|gb|EFD19965.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis KZN 605] gi|289537618|gb|EFD42196.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis K85] gi|289542274|gb|EFD45922.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis T17] gi|289684829|gb|EFD52317.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis 02_1987] gi|289689671|gb|EFD57100.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis T92] gi|289708212|gb|EFD72228.1| hypothetical integral membrane protein yrbE2A [Mycobacterium tuberculosis GM 1503] gi|289712230|gb|EFD76242.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|298493868|gb|EFI29162.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308216590|gb|EFO75989.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu001] gi|308325673|gb|EFP14524.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu002] gi|308331897|gb|EFP20748.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu003] gi|308335684|gb|EFP24535.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu004] gi|308337263|gb|EFP26114.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu005] gi|308343188|gb|EFP32039.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu006] gi|308347055|gb|EFP35906.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu007] gi|308350998|gb|EFP39849.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu008] gi|308355632|gb|EFP44483.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu009] gi|308359587|gb|EFP48438.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu010] gi|308363515|gb|EFP52366.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu011] gi|308367196|gb|EFP56047.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu012] gi|323720939|gb|EGB30004.1| hypothetical protein TMMG_03290 [Mycobacterium tuberculosis CDC1551A] gi|326902419|gb|EGE49352.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis W-148] gi|328457304|gb|AEB02727.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis KZN 4207] Length = 265 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 43/241 (17%), Positives = 90/241 (37%), Gaps = 4/241 (1%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + + + ++ I Q +++ + + +S +I Sbjct: 21 AIGGFYRTCVLTGKALVRRPFHWR----EAIEQGWFITSVSLLPTLAVSIPLTVLIIFTL 76 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 L++FGA S ++ + ++G L T ++IAG +AI A++G+ I EEIDA+ Sbjct: 77 NILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREEIDAMEV 136 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +G+D + L+ PR+ A I LL ++G + + + Sbjct: 137 LGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGTLTLVTG 196 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L + ++K+ G+V G +G V +V + + + + Sbjct: 197 LPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFATNVVLTT 256 Query: 367 F 367 Sbjct: 257 I 257 >gi|120405558|ref|YP_955387.1| hypothetical protein Mvan_4606 [Mycobacterium vanbaalenii PYR-1] gi|119958376|gb|ABM15381.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 255 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 49/236 (20%), Positives = 105/236 (44%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 G S + + ++ I Q ++V + +L++ ++ L+ Sbjct: 14 FGGFYSMALDTFVAMFQPPFAWREFISQAWFVARVSILPTLLLTIPYTVLLTFIETILLT 73 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + GA FS ++ +R+IG ++T +++AG +A+ A++G+ I EE+DA+R MG++ Sbjct: 74 EIGASDFSGTGAALGTVRQIGPIVTVLVVAGAGATAMCADLGARTIREELDALRVMGINP 133 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 ++ L+ PR+ A ++ L+ + GA + D+ F + ++ Sbjct: 134 IQALVVPRVLAAMVVSLALSATVILVGLSGAYFFVVYIQDVSPGAFAAGLTLIIGATDVV 193 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 L+KA + G++A +G +V +G V VV + + I+ + Sbjct: 194 IALVKAALFGLSAGLIACYKGISVRGGPAGVGNAVNETVVFTFMALFAINIVATAV 249 >gi|262201470|ref|YP_003272678.1| hypothetical protein Gbro_1508 [Gordonia bronchialis DSM 43247] gi|262084817|gb|ACY20785.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247] Length = 286 Score = 164 bits (415), Expect = 3e-38, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 106/274 (38%), Gaps = 10/274 (3%) Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFC-ASSYKFKGFLLSLIRQMYYV--- 163 + + ++ +G ++ A + + ++ Q+ V Sbjct: 4 ADFSVRVQRRYSARAQQLTGGIVRIGEFVTFIARAIIAIPFTVVHYRKHVLNQIAEVTFG 63 Query: 164 ------GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 G + +V+ +S ++ + L G S L +I RE+ ++ Sbjct: 64 SKSLLSGGGTLGIVLAMSLAAAMMLGVETYRGLQLVGMTSLSGMLSAIANSRELAPVVVG 123 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 + +A + G+ A++G+M+I++EI A+ +M + + L + R+ A ++ + + ++ + Sbjct: 124 IALAAKVGTGFTAQVGAMRISDEIAALDSMAIRSIPFLATTRMIAAMVCILPIYMVGLLA 183 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 + I +V+ Y + FH T ++ KA A + +V G+ Sbjct: 184 SYIATRLVVVWYNGESSGTYDYFFHLALTPTDLLYSATKAIVFAAIVALVHCSYGYFASG 243 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +G+ + SI + I D +F + + Sbjct: 244 GPEGVGQAAGRALRTSILAIGIFDVIFTFGLWGL 277 >gi|227536152|ref|ZP_03966201.1| ABC superfamily ATP binding cassette transporter permease protein [Sphingobacterium spiritivorum ATCC 33300] gi|300772122|ref|ZP_07081992.1| ABC superfamily ATP binding cassette transporter permease protein [Sphingobacterium spiritivorum ATCC 33861] gi|227244049|gb|EEI94064.1| ABC superfamily ATP binding cassette transporter permease protein [Sphingobacterium spiritivorum ATCC 33300] gi|300760425|gb|EFK57251.1| ABC superfamily ATP binding cassette transporter permease protein [Sphingobacterium spiritivorum ATCC 33861] Length = 244 Score = 164 bits (415), Expect = 3e-38, Method: Composition-based stats. Identities = 62/239 (25%), Positives = 108/239 (45%), Gaps = 1/239 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL- 190 +G I K K + + M +G+ + ++++IS GAV+ Q AFQL Sbjct: 6 IGKYILLLKSVFKKPEKGKIYWKETMFAMTDIGLGSLGLIVIISTFIGAVMTMQIAFQLV 65 Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 S + + E+G ++A+++ G+ GS+I ++IGSM++ E+IDA+ MG++ Sbjct: 66 SDLIPNSIIGQINRDSNILELGPTISALVLMGKVGSSISSQIGSMRVTEQIDALEIMGIN 125 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 LI P+I A I +P L I+A F AI+G + + A + + + Sbjct: 126 APGYLILPKILAGITMIPALVIVAIFCAILGGLLGGALSGAVSTADYIQGIQGSFNGFTV 185 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 ++KA I V +GF V + +G+ T VV ++ D L Sbjct: 186 SVAMVKAVVFGFIITSVPAYKGFYVSGGALEVGEAGTQAVVIGCITILASDYLITALML 244 >gi|319948072|ref|ZP_08022243.1| hypothetical protein ES5_02019 [Dietzia cinnamea P4] gi|319438260|gb|EFV93209.1| hypothetical protein ES5_02019 [Dietzia cinnamea P4] Length = 254 Score = 163 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 50/236 (21%), Positives = 98/236 (41%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G + T + S I Q +++ +L++ +++ L Sbjct: 12 IGEFFAMTLDTFVSFPSIVRQGREFIEQSWFIARVSTMATVLVAIPFTVLVSFTLNILLR 71 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + GA S ++ + ++G ++T +++AG +AI A++G+ I EEIDA+ +G+D Sbjct: 72 EIGAADLSGAGAALGAVTQVGPMVTVLIVAGAGATAICADLGARTIREEIDAMEVLGIDP 131 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V+ L+ PR+ A LL L I+G + + F + L + Sbjct: 132 VKRLVVPRVAASTFVALLLNGLVCTIGILGGFLFSVLLQGVNPGAFVNGITLLTGLGELI 191 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 IKA G+VA +G V +G V VV + + +++++ Sbjct: 192 LAQIKAGVFGMLAGLVACYKGLYVRGGPKEVGSAVNETVVFAFMCLFVVNTVITAV 247 >gi|296165200|ref|ZP_06847747.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899389|gb|EFG78848.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 287 Score = 163 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 104/253 (41%), Gaps = 6/253 (2%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVILISFVT 178 H+L + + +++G L L+ + + VG V +++ Sbjct: 27 IIRLGHLLVFFVRALAAVPLALRQYRGEFLRLLSNITWGNGSIVVGGGTAGVAVVLGVTV 86 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA++ +G L+ G + + S++ RE+ L+ ++ A + G A++GSM+I Sbjct: 87 GALVGIEGYNFLNLLGLGPATGFVSSLVNTRELAPLMASLAFAMQGGCRFTAQLGSMRIA 146 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ ++ + + L++ R+ A ++++ L + +V+ + Sbjct: 147 EEIDAMESIAIRPIPYLVTTRLIASVVAIVPLYAACLAIGYLSTQLVVGIGSGGSTGSYL 206 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 F +I LIKA + G+ +G + SI++VI Sbjct: 207 HYFTLMLAGQDIVYSLIKAVIFVWIASTIQCYYGYYASGGPEGVGVAAGHGMRASITVVI 266 Query: 359 IIDSLFAIFYFAI 371 I++ L + + + Sbjct: 267 IVNMLLTMALWGV 279 >gi|215429420|ref|ZP_03427339.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis EAS054] gi|289752626|ref|ZP_06512004.1| integral membrane protein [Mycobacterium tuberculosis EAS054] gi|289693213|gb|EFD60642.1| integral membrane protein [Mycobacterium tuberculosis EAS054] Length = 265 Score = 163 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 43/241 (17%), Positives = 90/241 (37%), Gaps = 4/241 (1%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + + + ++ I Q +++ + + +S +I Sbjct: 21 AIGGFYRTCVLTGKALVRRPFHWR----EAIEQGWFITSVSLLPTLAVSIPLTVLIIFTL 76 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 L++FGA S ++ + ++G L T ++IAG +AI A++G+ I EEIDA+ Sbjct: 77 NILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREEIDAMEV 136 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +G+D + L+ PR+ A I LL ++G + + + Sbjct: 137 LGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGTLTLVTG 196 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L + ++K+ G+V G +G V +V + + + + Sbjct: 197 LPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFATNVVLTT 256 Query: 367 F 367 Sbjct: 257 I 257 >gi|118619035|ref|YP_907367.1| YrbE family protein, YrbE5A [Mycobacterium ulcerans Agy99] gi|118571145|gb|ABL05896.1| YrbE family protein, YrbE5A [Mycobacterium ulcerans Agy99] Length = 289 Score = 163 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 63/276 (22%), Positives = 116/276 (42%), Gaps = 5/276 (1%) Query: 97 KPQRSFFYNSFKNLHYHIGKKIVKFIN-DSCSQAHILG----LVISNTGEFCASSYKFKG 151 +P+ + + + IG +I + +G L + F + Sbjct: 4 QPEPALLGSRNDDGVAAIGDWAAGYIRRHPLAALTTVGEQFVLGVRTIQYFFVDLVTGRF 63 Query: 152 FLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREI 211 +RQ ++ + V IL+S ++ Q A Q GA + + +R+ Sbjct: 64 QWQEFVRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGATSLAGAASGLAVIRQG 123 Query: 212 GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271 L+ AV++A GSAI A++GS + EE DA+ MGL +R L+ PR A I+ LT Sbjct: 124 ASLVAAVLMASAVGSAITADLGSRTMREETDAMEVMGLSVIRRLVVPRFAAAIMIGVALT 183 Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 + F + + + + F + F S AT ++F L KA + +V+ ++ Sbjct: 184 GVVCFVGFFASYMFNVYFQNGAPGSFVATFASFATTDDMFLALFKAVMFGAIVAVVSAQK 243 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 G + + V VV+SI +++I++ + Sbjct: 244 GLSTKGGPTGVANSVNAAVVESILVLMIVNVSISQL 279 >gi|125591222|gb|EAZ31572.1| hypothetical protein OsJ_15716 [Oryza sativa Japonica Group] Length = 322 Score = 163 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 37/236 (15%), Positives = 91/236 (38%), Gaps = 23/236 (9%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 + G+ + +L+ Q+ VG V +L + G Q + ++ G Sbjct: 99 ALLLAGQVFHRVLTGRVHRRNLLAQLRRVGPGSARVSLLTAAFVGMAFTIQFVREFTRLG 158 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 ++++ RE+ + +E+ D +R +G V Sbjct: 159 LHRSVDSVLALALSRELSPV-----------------------SEQTDTLRVLGAQPVDY 195 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L+ PR+ A +++LP+LT+++ + ++ + + + ++ ++ + L Sbjct: 196 LVVPRVVACVLALPVLTLMSFALGLASSAFLADSIFGVSTSIILESARRALRPWDLISSL 255 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +K+ I +V+ G + +G+ T+ VV S+ + + D + +F Sbjct: 256 LKSQVFGAIIAVVSCAWGVTTHGGAKGVGESTTSAVVVSLVGIFVADFALSCLFFQ 311 >gi|328951866|ref|YP_004369200.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM 11109] gi|328452190|gb|AEB08019.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM 11109] Length = 274 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 68/242 (28%), Positives = 120/242 (49%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 S A+I GL +++ RQ+Y +G G P+V L + G I Sbjct: 31 SLANIFGLFYRLLTLGLVGMTRYRLIRREFARQIYLIGGRGWPIVALTGMLLGLAIIVYA 90 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 + QL++ G E F +L+ I+ +RE+G +LTA+++ RSG+A++ EIG M + EI+A+ Sbjct: 91 SAQLAKIGGEQFVGNLLVIIVIRELGPVLTALLVLLRSGAAMIVEIGGMVLEREIEALEL 150 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MGL+ ++ PR W L+ISL L + A+ G + + D+ + VF+ F + Sbjct: 151 MGLEPEIVIGGPRFWGLVISLITLYFIFVVCAVWGGFLFSQIFADMYWGVFWLSFVNALG 210 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 ++ K IG+VA+ G H S+ + + V S+ + +I++ ++ Sbjct: 211 WPDLVLNFAKVVLFGMFIGVVAIYHGLQTADHWESIVAQTSRGAVISLLFLGLINTALSV 270 Query: 367 FY 368 Y Sbjct: 271 LY 272 >gi|296165083|ref|ZP_06847636.1| integral membrane protein YRBE1A [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899576|gb|EFG79029.1| integral membrane protein YRBE1A [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 264 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 103/251 (41%), Gaps = 4/251 (1%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 K+ + A + TG+ ++++ F+ + +++ + I +S Sbjct: 10 KVGSRLRPGTEVAGGFFRMCVLTGKALKQPFEWREFIWN----GWFLMRVSLLPTIAVSI 65 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 ++ L++ GA S +I + ++G ++T +++AG G+AI A++G+ Sbjct: 66 PETVLLIFTLNLLLAEIGAADVSGAGAAIGAVTQLGPIVTVLVVAGAGGTAICADLGART 125 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 I EEIDA+ +G+D + L+ PR+ A + LL L + G + ++ Sbjct: 126 IREEIDALEVLGIDPIHRLVVPRVVASTMVAVLLNGLVVAVGLGGGYLFSVYLQNVSSGA 185 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 + S + L + IKA G+V G V S LG V VV Sbjct: 186 YLSTLTALTGLPEVVIAFIKAATFGLIAGLVGCYRGLIVRGGSKGLGTAVNETVVLCFIA 245 Query: 357 VIIIDSLFAIF 367 + +++ Sbjct: 246 LFAVNAALTTI 256 >gi|126433443|ref|YP_001069134.1| hypothetical protein Mjls_0834 [Mycobacterium sp. JLS] gi|126233243|gb|ABN96643.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 281 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 111/266 (41%), Gaps = 10/266 (3%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVS-------- 166 + + +GL + + +S + ++QM + Sbjct: 8 RLFEATVGMVGGVFREVGLWVVFIAKAFSSVPVAVFKYRRQTLQQMNSLAWGRGSLIVDG 67 Query: 167 -GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 + V++L+ GA +A + L+ G S + I +RE+G +++AV AG++G Sbjct: 68 GAISVLLLLGIAVGASLAVEAFAVLNIIGFGGLSGIIGGIGGVRELGPIVSAVAFAGQAG 127 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 + AEIG+M+I EEIDA+ +GL + ++ R+ +I + ++A + V Sbjct: 128 CRMTAEIGAMRIAEEIDALEAIGLRPIPFVVGTRLIGAMILVVPGYLVALIANFFVMDTV 187 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 I +++ P + F T ++ +IK A+ ++ G+ +G+ Sbjct: 188 IRVFHNQPGGTYNHYFAQFVTPTDLAYSVIKVAVFCMAVTLIHCYYGYFASGGPVGVGRA 247 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAI 371 V S+ +I +D + + + + Sbjct: 248 SGRAVRTSLITIIFLDLILTVAMWGL 273 >gi|108797253|ref|YP_637450.1| hypothetical protein Mmcs_0273 [Mycobacterium sp. MCS] gi|119866338|ref|YP_936290.1| hypothetical protein Mkms_0283 [Mycobacterium sp. KMS] gi|126432877|ref|YP_001068568.1| hypothetical protein Mjls_0264 [Mycobacterium sp. JLS] gi|108767672|gb|ABG06394.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119692427|gb|ABL89500.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] gi|126232677|gb|ABN96077.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 256 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 48/244 (19%), Positives = 103/244 (42%), Gaps = 5/244 (2%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + G+ + ++ + FL Q ++V + +L++ +++ Sbjct: 10 LGAVGGLFGMALDAVRFTFRRPFQAREFL----EQSWFVARVSLAPTLLVAIPFTVLVSF 65 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 L + GA S + + ++G L+T +++AG +A+ A++GS I EEI+A+ Sbjct: 66 TLNILLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEIEAM 125 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 +G++ V L++PR+ A + LL L I+G D+ F + Sbjct: 126 EVLGINPVARLVTPRMLASGLVALLLNSLVVIIGIVGGYAFSVFVQDVNPGAFAAGITLL 185 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAV-GVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + + +KA G+VA G ++ + ++G V VV + + +I+ + Sbjct: 186 TGIGEVIISCVKAALFGLIAGLVACYRGLSINRGGAKAVGNAVNETVVYAFMALFVINVV 245 Query: 364 FAIF 367 Sbjct: 246 VTAI 249 >gi|120405557|ref|YP_955386.1| hypothetical protein Mvan_4605 [Mycobacterium vanbaalenii PYR-1] gi|119958375|gb|ABM15380.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 284 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 54/246 (21%), Positives = 100/246 (40%), Gaps = 9/246 (3%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVPV 170 ++ N +Q G + + G + L+ +I QM V V + Sbjct: 19 RVADPWNHIGTQTKFYGRTLRSVGYVFTH---YGVELIRIIAQMGLGAGALIVIGGTVAI 75 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 V ++ TGA++A QG S+ G E + + + +R I TA+ ++ G+ A Sbjct: 76 VGFLTVTTGALVAVQGYSDFSELGVEALTGFVSAYFNVRLIAPATTAIALSATIGAGATA 135 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 ++G+M+INEEIDA+ MG+ + L S R+ A + + L + A A Y Sbjct: 136 QLGAMRINEEIDALEVMGIRSIAFLASSRVIAGFLVVIPLYCVGVLMAFWAARFGTTVIY 195 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 V+ F + ++ + ++ I +V G+ +G+ V V Sbjct: 196 GQSTGVYDHYFKTFLNPTDLMWSFGQCIALSVIIMLVHTYYGYTARGGPAGVGEAVGRAV 255 Query: 351 VQSISI 356 S+ + Sbjct: 256 RTSLIV 261 >gi|326336634|ref|ZP_08202802.1| ABC superfamily ATP binding cassette transporter permease protein [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691104|gb|EGD33075.1| ABC superfamily ATP binding cassette transporter permease protein [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 273 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 52/229 (22%), Positives = 93/229 (40%), Gaps = 2/229 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G E K+ +++++ + S + ++ IS GAVIA Q A Sbjct: 32 LEAIGRYFLMIYEIFRKRTKWSIMKKLIMKEIDDLMYSSLGIIAFISLFVGAVIAIQMAL 91 Query: 189 QLSQFGAE-IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + + E T++++AG+ GS I + IG+M++ E+IDA+ M Sbjct: 92 NIDNPLIPKSLIGFATRQTIVLEFAPTFTSIIVAGKVGSFITSSIGTMRVTEQIDALDIM 151 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ + LI P+I AL++ P +A I G I + A F Sbjct: 152 GVNSLNYLIFPKIIALLL-YPFAITMAMALGIYGGYIAATVGHYATSAEFLEGLKLQFRS 210 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +I LIK+ A + + G+ + + +GK T V + Sbjct: 211 FDITYALIKSVIFAFVLATIPAYHGYYMKGGALDVGKASTVSFVWTSVA 259 >gi|296394453|ref|YP_003659337.1| hypothetical protein Srot_2050 [Segniliparus rotundus DSM 44985] gi|296181600|gb|ADG98506.1| protein of unknown function DUF140 [Segniliparus rotundus DSM 44985] Length = 290 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 57/273 (20%), Positives = 105/273 (38%), Gaps = 3/273 (1%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLI-- 157 F I + F LGLV+ S + + L+ L Sbjct: 9 PPLVAPFVRGVKAIFNGPLNFFEQMGHVLTFLGLVLGAIPHTFRSYGRQIRDTLIDLTWG 68 Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 VG + V+ ++ G VI +G LS F+ + + RE G L A Sbjct: 69 NGRIIVGGGTLSVLAVLGLSIGGVIGLEGYNALSIINIAPFTSFVSAYGMTREFGPLAAA 128 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 + A ++G I AEIG+M+I EEIDA+ G+ + +++ R+ A + + + +L Sbjct: 129 LGFAAQAGCRITAEIGAMRIAEEIDALEATGIRSIPFVVTTRVIAGVAVILPVYLLTLIL 188 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 S+V+ + + F ++ LIK A+ ++ +G+ Sbjct: 189 GYEACSLVVNVLHSQSSGTYDYNFSHFLVPRDVVLSLIKTAVFIVAVVMIHGYQGYYASG 248 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +G + SI IV +++ +F++ Sbjct: 249 GPEGVGLASGRAIRSSIVIVTVLNMFLTLFFWG 281 >gi|171463508|ref|YP_001797621.1| protein of unknown function DUF140 [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193046|gb|ACB44007.1| protein of unknown function DUF140 [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 216 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 114/209 (54%), Gaps = 5/209 (2%) Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G SG+ L S + G +++ Q A + QFGA F L ++ +RE+G ++TA+++AGR Sbjct: 12 GHSGIADRWLGSLLIGVILSFQAAIGMQQFGAVSFVGPLAALDIVREMGPIITAILLAGR 71 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 S +A EIG+M +N E+DA+ + G L+ RI A I+ P+LT+ A+ +I + Sbjct: 72 SSAAFAVEIGTMTVNSEVDALVSGG----YFLVVSRILAGILVAPILTLFADIVSIFSSM 127 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 + + Y IPF F++ S + +I +GL+KA I + G G + ++G Sbjct: 128 LTM-LIYGIPFVNFYNGMLSAVDVEDILSGLLKATLFGVVISAMGCLRGMQTGTGAAAVG 186 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 T VV SI +++I+D +FA + G Sbjct: 187 ISATRAVVSSIVMIVIVDGIFAFISYKTG 215 >gi|145222687|ref|YP_001133365.1| hypothetical protein Mflv_2099 [Mycobacterium gilvum PYR-GCK] gi|315443151|ref|YP_004076030.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|145215173|gb|ABP44577.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] gi|315261454|gb|ADT98195.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 255 Score = 163 bits (412), Expect = 6e-38, Method: Composition-based stats. Identities = 48/243 (19%), Positives = 106/243 (43%), Gaps = 4/243 (1%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + + + ++ F I Q ++V + ++++ ++ Sbjct: 11 MRAFGGFFSMALDTFVAMVKPPFAWREF----ISQSWFVARVSIVPTLMLTIPYTVLLTF 66 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 L++FGA FS ++ +R+IG ++T +++AG +A+ A++G+ I EE+DA+ Sbjct: 67 TFNILLTEFGAADFSGTGAALGTVRQIGPIVTVLVVAGAGATAMCADLGARTIREELDAL 126 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R MG++ ++ L+ PR+ A + L+ + GA ++ F + Sbjct: 127 RVMGVNPIQALVVPRVLAATLVSLALSATVILVGLAGAYFFCVYIQNVSPGAFAAGLTLI 186 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++ L+KA + G++A +G +VG +G V VV + + I+ + Sbjct: 187 IGATDVIIALVKAALFGLSAGMIACYKGISVGGGPAGVGNAVNETVVFTFMALFAINIVA 246 Query: 365 AIF 367 Sbjct: 247 TAV 249 >gi|126436262|ref|YP_001071953.1| hypothetical protein Mjls_3685 [Mycobacterium sp. JLS] gi|126236062|gb|ABN99462.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 285 Score = 163 bits (412), Expect = 6e-38, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 113/260 (43%), Gaps = 6/260 (2%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVS 166 + + + + ++ + I G ++ F+ ++ LI ++ + Sbjct: 13 RLARGVRRPVDVLGRLGDHMLFYIRAIGGVPHATVHFRKEIIRLIAEISMGAGTLAMIGG 72 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + +V ++ G +A QG L G E + L + + +R + + +A G+ Sbjct: 73 TLVIVGFLTLAAGGTLAVQGFSSLGDIGIEALTGFLAAFINVRIAAPTVAGIGLAATFGA 132 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 + A++G+M+INEEIDA+ +M + V L+S RI A +I++ L +A + + + V Sbjct: 133 GVTAQLGAMRINEEIDALESMAIRPVEYLVSTRIAAGMIAITPLYAIAVILSFLASQFVT 192 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + ++ F + ++ ++A MA I +V G+ + +G V Sbjct: 193 VMLFGQSGGLYDHYFDTFLNPIDLLWSFLQAVLMAITILLVHTYFGYFASGGPSGVGVAV 252 Query: 347 TTCVVQSISIVIIIDSLFAI 366 V S+ +V+ + L ++ Sbjct: 253 GNAVRTSLILVVSVTLLVSL 272 >gi|145225118|ref|YP_001135796.1| hypothetical protein Mflv_4540 [Mycobacterium gilvum PYR-GCK] gi|145217604|gb|ABP47008.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] Length = 270 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 105/237 (44%), Gaps = 1/237 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G ++S + + ++ + Q ++V + +L++ +++ LS Sbjct: 27 IGGLLSMSADAVKFLFRRPFQTSEFLLQSWFVARVSLAPTLLVAIPFTVLVSFTLNILLS 86 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + GA S + + ++G ++T +++AG +A+ A++GS I EEIDA+ +G++ Sbjct: 87 ELGAADLSGAGAAFGAVTQVGPMVTVLIVAGAGATAMCADLGSRTIREEIDALEVLGINP 146 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V+ L++PR+ A + LL L I+G + + F + + + Sbjct: 147 VQRLVTPRMLASGLVALLLNSLVVIIGIVGGYVFSIFVQGVNPGAFAAGITLLTGVPEVI 206 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVG-VHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 +KA G+VA G ++ + ++G V VV + + +++ + Sbjct: 207 ISCVKAALFGLIAGLVACYRGLSISTGGAKAVGNAVNETVVYAFMALFVVNVVVTAI 263 >gi|145225117|ref|YP_001135795.1| hypothetical protein Mflv_4539 [Mycobacterium gilvum PYR-GCK] gi|315445484|ref|YP_004078363.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|145217603|gb|ABP47007.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] gi|315263787|gb|ADU00529.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 282 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 116/268 (43%), Gaps = 10/268 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------ 162 L +G+ + + G ++ ++ ++ L+ ++ Sbjct: 10 QLVRRLGRPV-DTLGGIGEHTAFYGRALAGVPHAVVH---YRREIIRLVAEISMGAGTLA 65 Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 + V +V ++ G +A QG L G E + L + + +R ++ + +A Sbjct: 66 MIGGTVVIVGFLTLAAGGTLAVQGYSSLGDIGIEALTGFLAAFINVRISAPVVAGIGLAA 125 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 G+ + A++G+M+INEEIDA+ TMG+ V L+S RI A +I++ L +A + + + Sbjct: 126 TFGAGVTAQLGAMRINEEIDALETMGIRPVEYLVSTRIVAGMIAIAPLYSIAVILSFLAS 185 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 + + ++ F + ++ ++A MA A+ +V G+ G + + Sbjct: 186 KLTTVVLFGQSAGLYNHYFTTFLNPRDLLWSFLQAILMAMAVLLVHTYFGYFAGGGPSGV 245 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G V V S+ +VI + L ++ + Sbjct: 246 GVAVGNAVRTSLIVVISVTLLVSLAVYG 273 >gi|226364102|ref|YP_002781884.1| YrbE family protein [Rhodococcus opacus B4] gi|226242591|dbj|BAH52939.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 289 Score = 162 bits (411), Expect = 7e-38, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 103/248 (41%), Gaps = 10/248 (4%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---------VPVVILIS 175 + + T A F+ + IR + V + + V+ L++ Sbjct: 26 IGHMEEMGRQLHFYTHAVTAIPRTFRRYRKETIRLLAEVSMGTGALAVIGGTLVVISLLT 85 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G + QQGA + + G S + + RE ++ + + G+ A++G+M Sbjct: 86 TAVGYEVGQQGATSMGRIGIGALSGFISAFFNTREAIPVIAGIALTATVGAGFTAQLGAM 145 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 +++EEIDA+ TM + + L++ R+ A II++ L +A F + +V +Y Sbjct: 146 RVSEEIDAMETMSIPSLPYLVTTRVTAGIIAVIPLYAVALFVGYVATQLV-TEYLGEASG 204 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + F+ +++ ++K M+ + V G+ +G V V S+ Sbjct: 205 TYQHYFNVFLVPSDVAWSMVKVLAMSVVVMCVHCYHGYNAKGGPAGVGVAVGRAVRTSLI 264 Query: 356 IVIIIDSL 363 +++ID L Sbjct: 265 AIMVIDLL 272 >gi|315445485|ref|YP_004078364.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|315263788|gb|ADU00530.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 270 Score = 162 bits (411), Expect = 7e-38, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 105/237 (44%), Gaps = 1/237 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G ++S + + ++ + Q ++V + +L++ +++ LS Sbjct: 27 IGGLLSMSADAVKFLFRRPFQTSEFLLQSWFVARVSLAPTLLVAIPFTVLVSFTLNILLS 86 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + GA S + + ++G ++T +++AG +A+ A++GS I EEIDA+ +G++ Sbjct: 87 ELGAADLSGAGAAFGAVTQVGPMVTVLIVAGAGATAMCADLGSRTIREEIDALEVLGINP 146 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V+ L++PR+ A + LL L I+G + + F + + + Sbjct: 147 VQRLVTPRMLASGLVALLLNSLVVIIGIVGGYVFSIFVQGVNPGAFAAGITLLTGVPEVI 206 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVG-VHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 +KA G+VA G ++ + ++G V VV + + +++ + Sbjct: 207 ISCVKAALFGLIAGLVACYRGLSISTGGAKAVGNAVNETVVYAFMALFVVNVVVTAI 263 >gi|218658451|ref|ZP_03514381.1| probable ABC transporter, permease protein [Rhizobium etli IE4771] Length = 184 Score = 162 bits (411), Expect = 7e-38, Method: Composition-based stats. Identities = 89/155 (57%), Positives = 117/155 (75%) Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 ++MIAGRSGSAI AEIGSMK+ EEIDA++ MGL+ + +LI PR+ AL I+LPLLT+LANF Sbjct: 28 SIMIAGRSGSAITAEIGSMKMREEIDALKVMGLNPIGVLIFPRLVALTIALPLLTVLANF 87 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 +++ GA+ V W Y I FA F +R H TL+ + +G+IKAPFMA IGIVA EG VG Sbjct: 88 ASLAGAAAVAWGYSGITFANFLARLHEAVTLSTVLSGMIKAPFMALVIGIVAAVEGLKVG 147 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 + SLG+ VT VV++I +VI++D LFA+FY AI Sbjct: 148 GSAESLGQHVTASVVKAIFVVILMDGLFAMFYAAI 182 >gi|254820120|ref|ZP_05225121.1| hypothetical protein MintA_09346 [Mycobacterium intracellulare ATCC 13950] Length = 286 Score = 162 bits (411), Expect = 7e-38, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 108/261 (41%), Gaps = 14/261 (5%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVI 172 V +QA + + +S +K L +I +M V V +V Sbjct: 22 VAGWRRIGAQARFYARTLGAIRDALSS---YKHETLRMIAEMGLGAGALAVIGGTVGIVG 78 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 ++ G+++ QG LS G E + + + + R + L + ++ G+ A++ Sbjct: 79 FLTLSGGSLVTIQGYSSLSGIGVEALTGFVSAYVNGRIVTPLTAVIGLSATIGAGTTAQL 138 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 G+M+INEEIDA+ MG+ + L+S R+ A ++ + L + + + A Y Sbjct: 139 GAMRINEEIDALEVMGIRSIAYLVSTRVIAGVVVVIPLYCIGLWMSFYAARFATTSVYGQ 198 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 P V+ F + +I L++A M + +V G+ +G+ V V Sbjct: 199 PTGVYDHYFSTFLQPTDIIWSLLQAVLMGLVVMLVHTYYGYTASGGPAGVGEAVGRAVRS 258 Query: 353 SISIVIIIDSLFAIFYFAIGI 373 S+ ++ I + ++ I Sbjct: 259 SMV-----SAVLVILFSSLAI 274 >gi|326382582|ref|ZP_08204273.1| hypothetical protein SCNU_06570 [Gordonia neofelifaecis NRRL B-59395] gi|326198701|gb|EGD55884.1| hypothetical protein SCNU_06570 [Gordonia neofelifaecis NRRL B-59395] Length = 282 Score = 162 bits (411), Expect = 8e-38, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 104/272 (38%), Gaps = 6/272 (2%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY-- 162 + K + + H++ ++ + G + ++ + L+ + + Sbjct: 2 PPLLKPLEWLKKLWQAPRDGIVAMGHLITFLVKSIGLAPITFTHYRKEVWRLLSDVAWGN 61 Query: 163 ----VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 VG V V++++ + GA + +G L+ G + L + REI LL A Sbjct: 62 GAIVVGGGTVGVMVILGVMGGATVGIEGYTALNLLGMSPITGGLSAFATTREIAPLLAAT 121 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 +SG A++GSM+I+EEIDA+ ++ + + L++ R+ A ++S+ L ++ + Sbjct: 122 AFTAQSGCRFTAQLGSMRISEEIDALESIAIRPLPYLVTTRMAAAVLSIIPLYAISLAAN 181 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 + + + F ++ +K + G+ Sbjct: 182 YVACQFMFQVQSGQGAGTYLHYFDQFILSRDVVFSFLKVIVFVLLTTFIQCYYGYFASGG 241 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +G + SI ++ + + + ++ Sbjct: 242 PEGVGVAAGHAIRLSIITIVFANLILTLVFWG 273 >gi|289642564|ref|ZP_06474707.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] gi|289507652|gb|EFD28608.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] Length = 285 Score = 162 bits (411), Expect = 8e-38, Method: Composition-based stats. Identities = 55/259 (21%), Positives = 111/259 (42%), Gaps = 2/259 (0%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172 +G + LG K + + + RQ + +S ++ Sbjct: 19 RVGGSTSDAYGGGQALVTDLGEAALFAVRAFRDIPKTRRYASEVFRQTGIIILSSSGIIW 78 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 + + A I+ +G + L Q GA ++ ++ + + ++A + G +VAE+ Sbjct: 79 FMMAMLAAEISLEGHYLLRQLGAGGYTAVFTAVSDYT-VAPEMWGWILAAKVGCGLVAEL 137 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN-FSAIIGASIVIWKYYD 291 GSM+I+EEIDA+ MGLD + L+S R+ A+II P + I I+ + + ++ Sbjct: 138 GSMRISEEIDALEVMGLDSMSYLVSARLLAVIIVTPFMFIAGTGIMYIVNYVLNVHVFHS 197 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 + + S F + T ++ L+ M I ++ G+ +GK +V Sbjct: 198 VTQGAYLSVFWTFLTQTDVLLSLVAGGIMGTMIVLIGCFYGYTASGGPVGVGKNTAKSMV 257 Query: 352 QSISIVIIIDSLFAIFYFA 370 ++ IV ++ ++F +F Sbjct: 258 INLIIVSVVGAIFQQLFFG 276 >gi|118619125|ref|YP_907457.1| integral membrane protein YrbE3A_1 [Mycobacterium ulcerans Agy99] gi|118571235|gb|ABL05986.1| conserved hypothetical integral membrane protein YrbE3A_1 [Mycobacterium ulcerans Agy99] Length = 255 Score = 162 bits (410), Expect = 8e-38, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 104/249 (41%), Gaps = 4/249 (1%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 V + + + + ++ + I Q ++V + ++++ Sbjct: 5 VAVAKPLRAFGGFYSMALDTFVAMVHPPFAWREY----IAQAWFVARVSLLPTLMLTIPY 60 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 ++ L++ GA FS ++ +R+IG ++T +++AG +A+ A++G+ I Sbjct: 61 TVLLTFIENILLTEIGAADFSGTGAALGSVRQIGPIVTVLVVAGAGATAMCADLGARTIR 120 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE+DA+R MG+D ++ L+ PR+ A L+ + GA + F Sbjct: 121 EELDALRVMGVDPIQALVVPRVLAATTVSLALSASVILVGLSGAYFFCVFIQHVSPGAFA 180 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + ++ L+KA + G++A +G +VG +G V VV + + Sbjct: 181 AGLTLIIGTTDVVIALVKAALFGLSAGLIACYKGISVGGGPAGVGNAVNETVVFTFMALF 240 Query: 359 IIDSLFAIF 367 I+ + Sbjct: 241 AINIVATAV 249 >gi|296141835|ref|YP_003649078.1| hypothetical protein Tpau_4170 [Tsukamurella paurometabola DSM 20162] gi|296029969|gb|ADG80739.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM 20162] Length = 285 Score = 162 bits (410), Expect = 8e-38, Method: Composition-based stats. Identities = 54/274 (19%), Positives = 113/274 (41%), Gaps = 3/274 (1%) Query: 95 NQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLL 154 + + + +I + + + A L + + + + + + Sbjct: 6 APTEAPARRPSDLRIFLDNIDRNALGPLRTLGRTAQ---LATTTVMAAISDTIRGRLAVK 62 Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 + Q +++ L++ G ++ Q + Q GAE + +++ L Sbjct: 63 ETVIQAWFLVSVTAVPAFLMAIPFGVIVTIQVGGVVQQIGAESLLGAASGLAVIQQAAPL 122 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +++ G SAI A++G+ I +E+DA+RTMG+D V L++PR+ A ++ PLL + Sbjct: 123 AAGLLLGGAGASAIAADLGARTIRDEVDALRTMGIDPVHRLVAPRLIAAVVVAPLLNLFI 182 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 I+ A V D+ ++ F + AT+ ++ ++KA I IV + G Sbjct: 183 VVVGILAAFYVAVLGQDVTPGSYWLSFGAYATVRDLGFSMVKAALFGAIIAIVGCQHGLE 242 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + + V VV S +I+++ Y Sbjct: 243 AKGGARGVADAVNATVVVSTVAIIVLNFALTQAY 276 >gi|108797254|ref|YP_637451.1| hypothetical protein Mmcs_0274 [Mycobacterium sp. MCS] gi|119866339|ref|YP_936291.1| hypothetical protein Mkms_0284 [Mycobacterium sp. KMS] gi|126432878|ref|YP_001068569.1| hypothetical protein Mjls_0265 [Mycobacterium sp. JLS] gi|108767673|gb|ABG06395.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119692428|gb|ABL89501.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] gi|126232678|gb|ABN96078.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 285 Score = 162 bits (410), Expect = 8e-38, Method: Composition-based stats. Identities = 52/260 (20%), Positives = 111/260 (42%), Gaps = 10/260 (3%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVSG-------- 167 ++V S LG I G A + + ++R + + + Sbjct: 13 RVVSQFRKPASLVGRLGDHILFYGRALAGTPHAAMHYRKEIVRLIAEISMGAGTLAMIGG 72 Query: 168 -VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 V +V ++ G +A QG L G E + L + + +R ++ + +A G+ Sbjct: 73 TVVIVGFLTLAAGGTLAVQGYSSLGDIGIEALTGFLAAFINVRISAPVVAGIGLAATFGA 132 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 + A++G+M+INEE+DA+ TMG+ + L+S RI A +I++ L +A + + + + Sbjct: 133 GVTAQLGAMRINEEVDALETMGIRPIEYLVSTRIIAGMIAITPLYSVAVILSFLASQLTT 192 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + ++ F++ ++ ++A MA + + G+ +G V Sbjct: 193 VVLFGQSGGLYDHYFNTFLNPVDLLWSFLQAILMALTVLFIHTYFGYFATGGPAGVGVAV 252 Query: 347 TTCVVQSISIVIIIDSLFAI 366 V S+ +V+ + L ++ Sbjct: 253 GNAVRTSLIVVVAVTLLVSL 272 >gi|226361226|ref|YP_002779004.1| YrbE family protein [Rhodococcus opacus B4] gi|226239711|dbj|BAH50059.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 291 Score = 162 bits (410), Expect = 9e-38, Method: Composition-based stats. Identities = 44/279 (15%), Positives = 107/279 (38%), Gaps = 9/279 (3%) Query: 99 QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158 +R +G+ I + + + ++ ++ + Sbjct: 8 RRGSSGGILLQPIRSVGRAATSVIEEIGQVTVF---SVKTVALLPKTLRHYRKQTMTTMN 64 Query: 159 QMYY------VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 M + V V ++ + GAV+A Q G + + S +R I Sbjct: 65 NMAWGNGSLVVDGGVVSLMFFLGLAVGAVVAIQAFMAFDLLGFGALTGIIGSFGNVRVIA 124 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 ++T + A ++G + AEIGSM+I+EEIDA +MGL + ++ R+ ++ + + Sbjct: 125 PIITGIGFAAQAGCRMTAEIGSMRISEEIDATESMGLQAIPFVVGTRLIGSMLIVIPGYL 184 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 +A + ++I ++ P + F ++ ++ L+KA + ++ G Sbjct: 185 MALVVSFFTGGLIIKTFHRQPSGTYDHYFSQFLSVPDLMASLLKAVVFCAVVTMIHCYYG 244 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 + +G + S+ +++++ + + + Sbjct: 245 YFADGGPAGVGAASGRAIRASLVAIVVLNFCMTVAIWGL 283 >gi|226361937|ref|YP_002779715.1| YrbE family protein [Rhodococcus opacus B4] gi|226240422|dbj|BAH50770.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 286 Score = 162 bits (410), Expect = 9e-38, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 110/257 (42%), Gaps = 15/257 (5%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---------VP 169 V+ + QA G I + + + +R + +G+ V Sbjct: 23 VRILKAIGHQADFFGKTIR------LAPHAISSYKKETVRLIAEIGMGSGAMAIIGGTVV 76 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +V ++ G ++A QG L G E + + + +R + +++ + +A G+ Sbjct: 77 IVGFMTLSGGTLLAIQGFSSLGNIGVEALTGFFAAFINVRIVAPVISGIALAATIGAGAT 136 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A++G+M+I+EEIDA+ MG+ + L+S R+ A +IS+ L +A + + + Sbjct: 137 AQLGAMRISEEIDALEVMGIRSMSYLVSTRLIAGMISIVPLYSMAVIMSFVASQFTTTYV 196 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 Y V+ F + ++F ++A MA + ++ G+ +G+ V Sbjct: 197 YGQSSGVYDHYFTTFLRPTDLFWSFLQAVVMALVVMLIHCYYGYHARGGPAGVGEAVGRA 256 Query: 350 VVQSISIVIIIDSLFAI 366 V S+ V+ + + ++ Sbjct: 257 VRTSLIAVVSVTLIASL 273 >gi|120404938|ref|YP_954767.1| hypothetical protein Mvan_3984 [Mycobacterium vanbaalenii PYR-1] gi|119957756|gb|ABM14761.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 257 Score = 162 bits (410), Expect = 9e-38, Method: Composition-based stats. Identities = 50/243 (20%), Positives = 105/243 (43%), Gaps = 4/243 (1%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + + + F+ +++ Q ++V V ++++ ++ Sbjct: 12 VRALGGFFAMSLDTFILMFQRPFAFREYVI----QTWFVARVSVLPALMLTMPYSVLLVF 67 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 L++FGA FS +I + +IG ++T ++++G +A+ A++G+ I +E+DA+ Sbjct: 68 TFNILLNEFGASDFSGTGAAIGTVNQIGPIVTVLVVSGAGATAMCADLGARTIRDELDAL 127 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R MG++ V+ L+ PR+ A L+ + GA + + F S Sbjct: 128 RVMGINPVQALVVPRVLAATTVALALSASVIIVGLAGAFLFCVYVQHVSAGAFISGLTLL 187 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++ LIKA A G++A +G VG +G V VV + ++ I+ + Sbjct: 188 TGAGDVVVSLIKATLFGAAAGLIACYKGVYVGGGPAGVGNAVNETVVFTFMVLFAINVIV 247 Query: 365 AIF 367 Sbjct: 248 TAV 250 >gi|296169577|ref|ZP_06851197.1| integral membrane protein YrbE4a [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895843|gb|EFG75538.1| integral membrane protein YrbE4a [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 249 Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats. Identities = 47/240 (19%), Positives = 103/240 (42%), Gaps = 1/240 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G + + + + ++ + Q ++V + +L++ +++ Sbjct: 1 MEAVGGLFAMSADAIKFVFRRPFQWREFLEQSWFVARVAIAPTLLVAIPFTVLVSFTLNI 60 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L + GA S + + ++G L+T +++AG +A+ A++GS I EEIDA+ +G Sbjct: 61 LLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGSTAMCADLGSRTIREEIDAMEVLG 120 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ V+ L++PR+ A + LL L I+G + D+ F + + Sbjct: 121 INPVQRLVTPRMLAAGLVALLLNSLVVIIGIVGGYVFSVFVQDVNPGAFAAGITLLTGVP 180 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + +KA G+VA G G + ++G V VV + + +++ + Sbjct: 181 EVIISCVKAALFGLIAGLVACYRGLTITGGGAKAVGNAVNETVVYAFMSLFVVNVVVTAI 240 >gi|108800638|ref|YP_640835.1| hypothetical protein Mmcs_3672 [Mycobacterium sp. MCS] gi|119869777|ref|YP_939729.1| hypothetical protein Mkms_3745 [Mycobacterium sp. KMS] gi|108771057|gb|ABG09779.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119695866|gb|ABL92939.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] Length = 285 Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats. Identities = 50/260 (19%), Positives = 112/260 (43%), Gaps = 6/260 (2%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVS 166 + + + + ++ + I G ++ F+ ++ LI ++ + Sbjct: 13 RLARGVRRPVDVLGRLGDHMLFYIRAIGGVPHATLHFRKEIIRLIAEISMGAGTLAMIGG 72 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + +V ++ G +A QG L G E + L + + +R + + +A G+ Sbjct: 73 TLVIVGFLTLAAGGTLAVQGFSSLGDIGIEALTGFLAAFINVRIAAPTVAGIGLAATFGA 132 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 + A++G+M+INEEIDA+ +M + V L+S RI A +I++ L +A + + + Sbjct: 133 GVTAQLGAMRINEEIDALESMAIRPVEYLVSTRIAAGMIAITPLYAIAVILSFVASQFTT 192 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + ++ F + ++ ++A MA I +V G+ + +G V Sbjct: 193 VMLFGQSAGLYDHYFDTFLNPIDLLWSFLQAVLMAITILLVHTYFGYFASGGPSGVGVAV 252 Query: 347 TTCVVQSISIVIIIDSLFAI 366 V S+ +V+ + L ++ Sbjct: 253 GNAVRTSLILVVSVTLLVSL 272 >gi|119386398|ref|YP_917453.1| hypothetical protein Pden_3690 [Paracoccus denitrificans PD1222] gi|119376993|gb|ABL71757.1| protein of unknown function DUF140 [Paracoccus denitrificans PD1222] Length = 252 Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats. Identities = 62/261 (23%), Positives = 116/261 (44%), Gaps = 10/261 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N G+ + + ++ G+ A L RQ+ +G + Sbjct: 2 NPIRLTGRAAIGLTRMTGQVTIFAARGLARVGQHPA----------ELARQVVQIGWLSL 51 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 PVV L + TGA +A Q +F A +++I RE+G +L +M+A R SAI Sbjct: 52 PVVGLTALFTGAALALQIHSGGERFQAGDVVPAIVAIGMARELGPVLGGLMVAARVASAI 111 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AE+G+M++ E+IDA+ T+ D V L+SPR+WA ++ +P+L + + I+G ++ Sbjct: 112 AAELGTMRVTEQIDALVTLSTDPVGWLVSPRLWAALLCVPMLVGVGDVIGIMGGWLIGVN 171 Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 A++ S + ++ +GL+K + + G + +G+ T Sbjct: 172 ALGFNSAIYLSNSWAYLESWDVVSGLLKGAVFGLIVALSGCWFGMTAAGGAAGVGRATTN 231 Query: 349 CVVQSISIVIIIDSLFAIFYF 369 VV + ++ + +F Sbjct: 232 AVVAASVGILAANFALTGLFF 252 >gi|183984020|ref|YP_001852311.1| integral membrane protein YrbE3A_1 [Mycobacterium marinum M] gi|183177346|gb|ACC42456.1| conserved hypothetical integral membrane protein YrbE3A_1 [Mycobacterium marinum M] Length = 255 Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 104/249 (41%), Gaps = 4/249 (1%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 V + + + + ++ + I Q ++V + ++++ Sbjct: 5 VAVAKPLRAFGGFYSMALDTFVAMVHPPFAWREY----IAQAWFVARVSLLPTLMLTIPY 60 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 ++ L++ GA FS ++ +R+IG ++T +++AG +A+ A++G+ I Sbjct: 61 TVLLTFIENILLTEIGAADFSGTGAALGSVRQIGPIVTVLVVAGAGATAMCADLGARTIR 120 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE+DA+R MG+D ++ L+ PR+ A L+ + GA + F Sbjct: 121 EELDALRVMGVDPIQALVVPRVLAATTVSLALSASVILVGLSGAYFFCVFIQHVSPGAFA 180 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + ++ L+KA + G++A +G +VG +G V VV + + Sbjct: 181 AGLTLIIGTTDVVIALVKAALFGLSAGLIACYKGISVGGGPAGVGNAVNETVVFTFMALF 240 Query: 359 IIDSLFAIF 367 I+ + Sbjct: 241 AINIVATAV 249 >gi|120401973|ref|YP_951802.1| hypothetical protein Mvan_0958 [Mycobacterium vanbaalenii PYR-1] gi|119954791|gb|ABM11796.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 285 Score = 161 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 106/253 (41%), Gaps = 6/253 (2%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVILISFVT 178 H+L + + ++ + L+ + + VG V +++ Sbjct: 25 LVRLGHMLVFFVRALHGLPVALRHYRKEFVRLLSDIAWGNGSLVVGGGTAGVAVVLGITV 84 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA++ +G L G + + S++ RE+ + ++ A ++G A++GSM+I Sbjct: 85 GALVGIEGYNFLDLLGLGPATGIISSLVNTRELAPIAASLAFATQAGCRFTAQLGSMRIA 144 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ ++G+ + L++ R+ A ++++ L +L + + IV+ + Sbjct: 145 EEIDALESLGIRPIPYLVTTRLMASVVAVIPLYVLCLAVSYLTTQIVVQIISGGSAGSYL 204 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 F + +I ++K + GF +G + SI++VI Sbjct: 205 HYFTLMLSGQDILYSVLKTVIFVWIASTIQCYYGFYASGGPVGVGVAAGHAMRASITVVI 264 Query: 359 IIDSLFAIFYFAI 371 +++ L + +++ Sbjct: 265 MVNMLLTMALWSV 277 >gi|226304447|ref|YP_002764405.1| YrbE family protein [Rhodococcus erythropolis PR4] gi|229494370|ref|ZP_04388133.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|226183562|dbj|BAH31666.1| putative YrbE family protein [Rhodococcus erythropolis PR4] gi|229318732|gb|EEN84590.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length = 254 Score = 161 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 99/239 (41%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G + + + + I Q ++V + +L++ +++ Sbjct: 9 LRAVGGFFQMSAQTLRAVFSRPFQRQEFIDQAWFVARVSMVPTVLVAIPFTVLVSFTINI 68 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L + GA S ++ + ++G ++T +++AG +AI A++ + I EEIDA++ +G Sbjct: 69 LLREIGAADLSGAGAALGTVTQVGPIVTVLIVAGAGATAICADLSARTIREEIDAMKVLG 128 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ + L+ PR+ A LL L I+G + D+ F + Sbjct: 129 INPIHRLVVPRVLASTGVALLLNGLVCTIGILGGFVFSVFIQDVNPGAFVNGITLLTGFG 188 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + ++KA G+VA G V + S+G V VV + + +++ L Sbjct: 189 ELMLSMVKAGLFGMIAGLVAAYLGLNVKGGAKSVGDAVNQTVVFAFMALFVVNVLITTI 247 >gi|120403834|ref|YP_953663.1| hypothetical protein Mvan_2850 [Mycobacterium vanbaalenii PYR-1] gi|119956652|gb|ABM13657.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 282 Score = 161 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 113/264 (42%), Gaps = 10/264 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------ 162 L IG+ + + G ++ ++ ++ L+ ++ Sbjct: 10 RLAQQIGRPV-GALGRIGDHTSFYGRALAGVPHAAMH---YRKEIIRLVAEISMGAGTLA 65 Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 + + +V ++ G +A QG L G E + L + + +R ++ + +A Sbjct: 66 MIGGTIVIVGFLTLAAGGTLAVQGYSSLGDIGIEALTGFLAAFINVRISAPVVAGIGLAA 125 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 G+ + A++G+M+INEEIDA+ TMG+ V L+S RI A +I++ L +A + + Sbjct: 126 TFGAGVTAQLGAMRINEEIDALETMGIRPVEYLVSTRIVAGMIAITPLYSIAVMLSFAAS 185 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 + + ++ F + ++ ++A MA A+ +V G+ + + Sbjct: 186 KLTTVVLFGQSAGLYNHYFTTFLNPRDLLWSFLQAILMAMAVLLVHTYFGYFATGGPSGV 245 Query: 343 GKKVTTCVVQSISIVIIIDSLFAI 366 G V V S+ +VI + L ++ Sbjct: 246 GVAVGNAVRTSLIVVISVTLLVSL 269 >gi|317508867|ref|ZP_07966506.1| hypothetical protein HMPREF9336_02878 [Segniliparus rugosus ATCC BAA-974] gi|316252828|gb|EFV12259.1| hypothetical protein HMPREF9336_02878 [Segniliparus rugosus ATCC BAA-974] Length = 315 Score = 161 bits (408), Expect = 2e-37, Method: Composition-based stats. Identities = 52/301 (17%), Positives = 123/301 (40%), Gaps = 5/301 (1%) Query: 71 LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAH 130 VS ++L + + + + ++ S + +G +V I + S Sbjct: 6 PDDVSLGEDRLDAGTADSGKGAKSSEADTPSASPDKPGFAEQCVG-AVVGGIRQADSSLQ 64 Query: 131 ILGLVISNTGEFCA----SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 +G ++ + + + + Q ++ +L+S G +++ Q Sbjct: 65 TVGRLVVLSLHAFRFLAVDLIRLQHPWRETVSQCAFLIRVTATPALLMSVPFGVILSVQV 124 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 + Q GA S + + +++ ++ A+++ G +GSA+ ++G+ I EEIDA+ Sbjct: 125 NSLVKQIGAVSMSGAVGGMGVMQQGAPIVAALLLGGAAGSAVATDLGARSIREEIDAMLV 184 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG++ VR L+SPR+ A++ PLL + F + ++ + + F + A Sbjct: 185 MGINPVRRLVSPRLAAILFVAPLLCVFIIFMGLAAGYVIAIVGMSGTPGSYIASFSAFAR 244 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + ++ LIK+ ++A + G + + VV + ++ ++ + Sbjct: 245 VEDMAVALIKSLLFGVVAILIACQRGLETRGGARGVADAANASVVLGVISIVGMNLVLTE 304 Query: 367 F 367 Sbjct: 305 L 305 >gi|126436744|ref|YP_001072435.1| hypothetical protein Mjls_4172 [Mycobacterium sp. JLS] gi|126236544|gb|ABN99944.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 257 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 53/243 (21%), Positives = 108/243 (44%), Gaps = 4/243 (1%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + + + + ++ FLL Q ++V + I+++ + Sbjct: 13 MRALGGFFAMSLDAFVQMFRPPFAWREFLL----QTWFVARVALFPTIMLAIPFTVLTVF 68 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 L + GA FS ++ + +IG ++T ++IAG +A+ A++G+ I EEIDA+ Sbjct: 69 TINVLLVEIGAADFSGTGAALGAVTQIGPIVTVLVIAGAGATAMCADLGARTIREEIDAL 128 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R +G++ ++ L+ PRI A + +LT L I+G+ I + ++ F + Sbjct: 129 RVLGINPIQALVVPRIVAATVVSLMLTSLVTMVGIVGSFIFSVYFQNVTPGAFAAGLTLL 188 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + L+KA A ++A +G +VG +G V VV + + +I+ + Sbjct: 189 VGTPEVVVNLLKAAIFGLAASLIACYKGISVGGGPQGVGNAVNETVVYTFMALFVINVIA 248 Query: 365 AIF 367 Sbjct: 249 TAV 251 >gi|120401160|ref|YP_950989.1| hypothetical protein Mvan_0132 [Mycobacterium vanbaalenii PYR-1] gi|119953978|gb|ABM10983.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 265 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 46/240 (19%), Positives = 95/240 (39%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +G + ++ + I Q +++ + +S ++ Sbjct: 18 GLEAVGGFVRMCVLVGKATLRPPFQWREFILQSWFLMRVAFLPTLAVSIPLTVLLIFTLN 77 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L++FGA S +I + ++G L+T +++AG +AI A++G+ I EEIDA+ + Sbjct: 78 ILLAEFGAADVSGAGAAIGAVTQLGPLVTVLVVAGAGSTAICADLGARTIREEIDALEVL 137 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+D + L+ PR+ A LL ++G I ++ + S L Sbjct: 138 GIDPIHRLVVPRVVASTFVAILLNGAVITVGLVGGFIFGVYLQNVSAGAYVSTLTLITGL 197 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + ++KA G+V G V + +G V +V + + ++ + Sbjct: 198 PEVVISIVKAATFGLIAGLVGCYRGLTVAGGAKGVGTAVNETLVLCVIALFAVNVVLTTI 257 >gi|296163926|ref|ZP_06846562.1| integral membrane protein YrbE2a [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900707|gb|EFG80077.1| integral membrane protein YrbE2a [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 243 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 48/239 (20%), Positives = 103/239 (43%), Gaps = 4/239 (1%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 + TG+ A ++++ F+L Q +++ ++++ +I Sbjct: 1 MASFTQMCVLTGKALARPFQWREFIL----QGWFLLGVSFLPTVMVAIPLTVLIIFTLNI 56 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L++FGA S ++ + ++G L+T +++AG +AI A++G+ I EEIDA+ +G Sbjct: 57 LLAEFGAADVSGAGAALGAVTQLGPLVTVLVVAGAGSTAICADLGARTIREEIDAMEVLG 116 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 +D + L+ PR+ A I LL ++G + ++ + S L Sbjct: 117 IDPIHRLVVPRVVASTIVALLLNGAVISIGLVGGFLFGVYIQNVSAGAYVSTLTLITGLP 176 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + ++KA G+V G G + +G V +V ++ + ++ + Sbjct: 177 EVLISIVKATLFGLIAGLVGCYRGLTAGGGAKGVGTAVNETLVLAVVALFAVNVVLTTI 235 >gi|311743965|ref|ZP_07717771.1| ABC superfamily ATP binding cassette transporter, membrane protein [Aeromicrobium marinum DSM 15272] gi|311313095|gb|EFQ83006.1| ABC superfamily ATP binding cassette transporter, membrane protein [Aeromicrobium marinum DSM 15272] Length = 275 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 49/229 (21%), Positives = 97/229 (42%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 K + + ++ L I K Q +++ +L++ G Sbjct: 18 KTFDGIDTFGAMVILGIGALRYIATDIVTRKFSWKEFYDQAWFMTRVAFLPTVLVAIPFG 77 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 +IA Q Q GA F+ + I LR+ L+T++++AG GSAI A++G+ + E Sbjct: 78 IIIAIQVGAVAQQIGAVSFTGAVNGIGILRQAAPLVTSLLMAGAVGSAICAQLGAQTVRE 137 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DA++ MGL+ V+ +++PR+ A ++ LL + +A++ ++ + + Sbjct: 138 EVDAMKVMGLNPVQRIVAPRVAAAMVVGALLNVFVAATAMVTGYLINVGGGAVSSGAYLG 197 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 F + A ++ KA I+A +G + V Sbjct: 198 SFIAFAQPTDLLLAEGKAVIFGFLATIIAAHKGLNASGGPKGVADAVNQ 246 >gi|296141836|ref|YP_003649079.1| hypothetical protein Tpau_4171 [Tsukamurella paurometabola DSM 20162] gi|296029970|gb|ADG80740.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM 20162] Length = 285 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 47/260 (18%), Positives = 105/260 (40%), Gaps = 6/260 (2%) Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLI------RQMYYVGV 165 +G+ H++G + ++ + +S + R VG Sbjct: 12 RTLGRVYTWLRGVLARLGHMMGFCVQAVIMIPHAARHYSRQTISTVTDLTWGRGAVIVGG 71 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 +++++ G +A Q L G + + ++ +RE +L A A ++G Sbjct: 72 GTSLMMVVLGLAVGGTVAVQAFSTLDLLGMGPLTGSISALANIREFAPILAAAGFAVQAG 131 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 + AEIG+M+INEEIDA+ ++GL + ++S R+ A +I++ ++A + S++ Sbjct: 132 CRMTAEIGAMRINEEIDALESLGLRSISFVVSTRVLAGLIAVIPTFLIAIVVSFFACSVI 191 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + + F + ++ +K + ++ +GF +G Sbjct: 192 VTVVQGESAGAYTHYFRQFLSGPDLLASTVKVIVFLIVVILIHCYQGFFAAGGPEGVGVA 251 Query: 346 VTTCVVQSISIVIIIDSLFA 365 V S+ ++++D L Sbjct: 252 SGRAVRASLVSIVVLDMLLT 271 >gi|229494350|ref|ZP_04388113.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] gi|229318712|gb|EEN84570.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] Length = 284 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 63/250 (25%), Positives = 108/250 (43%), Gaps = 4/250 (1%) Query: 123 NDSCSQAHILGLVISNTGEFCASSY----KFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 N + +GL+ + T C +++ + + QM+++ L+ Sbjct: 25 NMFSNLLSEIGLLFTFTVRVCVAAFTSLRHKRLAWREALDQMWFLAHVTSVASALVMIPL 84 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G +A Q Q GA +S +++ L + + G L+ A++IAG GSAI A++G+ I Sbjct: 85 GVGVALQIGALADQIGAGAYSGAVVAFLIIGQAGPLVCALIIAGVGGSAICADLGARTIR 144 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ +GL + L+ PR+ A+ + LL + + + V D F Sbjct: 145 EEIDALEVLGLPVLERLVVPRMIAIAVVCLLLNSIVLVIGLGASLFVHVLILDGNAQSFL 204 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + ++ IKA A GIVA +G V + +G V VV S +V Sbjct: 205 RNLVQFSQPSDFVVSGIKAVAFALISGIVACYKGLTVKRGAQGVGDAVNETVVLSFVLVF 264 Query: 359 IIDSLFAIFY 368 + + FY Sbjct: 265 VANLAITQFY 274 >gi|289642565|ref|ZP_06474708.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] gi|289507653|gb|EFD28609.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] Length = 286 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 111/279 (39%), Gaps = 6/279 (2%) Query: 93 IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGF 152 R + N+ + + I D +L ++S + + +G+ Sbjct: 6 AAGPSRHRPRSSPAVTNVMIKFPPSLQRVIVDVGQSGQLLAQLVST------AVRQPRGY 59 Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 +MY + L +I L+ GA+ + REI Sbjct: 60 WAETRDEMYAMLRFCWLSCTLAVGGFCFLIGNYAYNILTLLGAQNRLGTVFVFASAREIS 119 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 T + +AG G+A+ A++G+ +I EE+DA++ +GLD +R+L+ PR+ A+ + I Sbjct: 120 PFCTGMAVAGVMGTALTADLGARRIREELDAMKVLGLDAMRVLVLPRVIAITVMTAAFNI 179 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 + + A I D FFS F S T+ ++ ++K + IGIV ++G Sbjct: 180 VGVAVGVAMAMISGTVIGDTSAGSFFSVFLSNVTVPDLVGTVVKTVLIGFFIGIVCAQKG 239 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +G+ V VV + V +I+ + + Sbjct: 240 LNARGGPEGVGRAVNEAVVLCFAAVWVINFVANAVLLGL 278 >gi|148263953|ref|YP_001230659.1| hypothetical protein Gura_1896 [Geobacter uraniireducens Rf4] gi|146397453|gb|ABQ26086.1| protein of unknown function DUF140 [Geobacter uraniireducens Rf4] Length = 258 Score = 160 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 71/258 (27%), Positives = 129/258 (50%), Gaps = 3/258 (1%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + +G+ I+ I D I+ N + ++Q+Y+ G+ + Sbjct: 1 MITALGRWIIYRILDLSDLVDIILQACINIPATIRYGR--RPVFTVFMKQVYFTGLEALK 58 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V+++IS G VI Q L G EI + ++ + +RE+G LLTA+++ RSG+AI Sbjct: 59 VIVVISLTIGVVIITQI-ISLVGAGNEILTGKVLIWVVIRELGPLLTAIVVIARSGTAIA 117 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 E+G MKIN EI++I ++G+ + LI PRI+ + ++ +LTI ++I G IV Sbjct: 118 TELGYMKINNEIESIESLGIPAGQYLIMPRIFGVTTAVMILTIYFEIASIFGGFIVASIG 177 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 + +PF F ++ TL + + K+ F + K+G VG + + + T Sbjct: 178 WHVPFDRFSEGVFTSLTLKELGRSVAKSFFFGLFLSAACCKQGLGVGKSATQIPQAATKG 237 Query: 350 VVQSISIVIIIDSLFAIF 367 V+QS+ +V ++D + + Sbjct: 238 VMQSLFLVFLLDGIITVV 255 >gi|111023083|ref|YP_706055.1| ABC transporter membrane protein [Rhodococcus jostii RHA1] gi|110822613|gb|ABG97897.1| possible ABC transporter integral membrane protein [Rhodococcus jostii RHA1] Length = 269 Score = 160 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 52/242 (21%), Positives = 104/242 (42%) Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 ++G I+ T + K L+ Q + + +L+ G +IA Sbjct: 21 ALIGFSIATTVAAVRVLVRRKLAWRELLDQAWRLASVTSAPALLLMIPIGVLIAVTIGSL 80 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 Q GAE ++ ++ + + + L+ A+M+AG GSAI A++GS I EE++A+ +GL Sbjct: 81 AGQLGAEGYTGAVVGFVIVGQASALVCALMLAGVGGSAICADLGSRTIREEVEAMEVLGL 140 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 + + L+ PR+ A +I L + + + + F + L++ Sbjct: 141 NVIERLVVPRVLAAVIVGIALCAMVTAVGVSACFLFQVIVQNSSAGSFLTALSQYTRLSD 200 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 L+K+ A +VA +G + + V VV + +V I++++ + Y Sbjct: 201 FVVALVKSMAFAVTSALVASFKGLHAKGGPSGVADAVNEAVVLAFILVFIVNTVLSQLYS 260 Query: 370 AI 371 + Sbjct: 261 VL 262 >gi|126437565|ref|YP_001073256.1| hypothetical protein Mjls_5001 [Mycobacterium sp. JLS] gi|126237365|gb|ABO00766.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 280 Score = 160 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 55/266 (20%), Positives = 112/266 (42%), Gaps = 9/266 (3%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVG 164 + + + ++ QA G I +++ + LI +M + Sbjct: 9 LRRVFRWVPGAVDTVGEQALFYGETIRYIPNALT---RYRKETIRLIAEMTMGAGALVMI 65 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V V ++ +G VIA QG L G E + L + L +R + ++ + +A Sbjct: 66 GGTVGVAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAGIALAATI 125 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 G+ A++G+M++ EEIDA+ TM + V L+S R+ A +I++ L L+ +A A Sbjct: 126 GAGTTAQLGAMRVAEEIDAVETMAVHSVSYLVSTRLMAGLIAIVPLYSLSVLAAFFAARF 185 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 ++ F++ +++ ++A M+ A+ +V G+ +G Sbjct: 186 TTVFINGQSAGLYDHYFNTFLVPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGPVGVGI 245 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370 V V S+ +V+ I ++ + Sbjct: 246 AVGQAVRTSLIVVVTITLFISLAVYG 271 >gi|118473565|ref|YP_887174.1| hypothetical protein MSMEG_2854 [Mycobacterium smegmatis str. MC2 155] gi|118174852|gb|ABK75748.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length = 281 Score = 160 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 113/261 (43%), Gaps = 9/261 (3%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVP 169 ++ V G ++ T ++ ++ LI ++ + V Sbjct: 15 RRPVDVAGRLGDHTSFYGRALAGTPHAAMH---YRREVIRLIAEISMGAGTLAMIGGTVV 71 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +V ++ G +A QG L G E + L + + +R ++ + +A G+ + Sbjct: 72 IVGFLTLAAGGTLAVQGYSSLGNIGIEALTGFLAAFINVRISAPVVAGIGLAATFGAGVT 131 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A++G+M+INEEIDA+ +MG+ V L+S RI A ++++ L +A + +++ Sbjct: 132 AQLGAMRINEEIDALESMGIRPVEYLVSTRIVAGMVAITPLYAVAVILSFAASNLTTVVM 191 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 + ++ F + ++ ++A MA AI +V GF + +G V Sbjct: 192 FGQSAGLYNHYFSTFLNPVDLLWSFLQAILMAIAILLVHTYFGFFAAGGPSGVGVAVGNA 251 Query: 350 VVQSISIVIIIDSLFAIFYFA 370 V S+ +VI + L ++ + Sbjct: 252 VRTSLIVVIAVTLLVSLAVYG 272 >gi|223937195|ref|ZP_03629102.1| protein of unknown function DUF140 [bacterium Ellin514] gi|223894217|gb|EEF60671.1| protein of unknown function DUF140 [bacterium Ellin514] Length = 311 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 115/261 (44%), Gaps = 5/261 (1%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ-MYYVGVSGVPVV 171 + G+K+++F+ + G + + + LI Q + GV +P+ Sbjct: 54 YFGRKVIRFLLTIQGLGAFF---LITLGVIFTKFRRARSVVWPLIWQELNRSGVKLLPMF 110 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 + +S G V+ Q L++ A + +M ++ +REIG +LTA+++ R+G++ V E Sbjct: 111 LFLSLAMGLVVIGQAVSWLTRVNAVQYLGTIMVLVVVREIGPMLTALLVLARAGTSNVIE 170 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY-Y 290 +G+ + E++A+ + +D + L+ PR+ + I + LT+ +++ + + Sbjct: 171 LGTARALGEVEALEALVIDPIHYLVMPRVIGMAIGVFSLTVYFILGSLLSGYMWAFLQDV 230 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 + +F + + + K+ I ++ G A + + V Sbjct: 231 PLRPTDYFEQLAGALSYTDFIVLGTKSILFGVIISVITCYHGLAQPLQLEEVSNATVRAV 290 Query: 351 VQSISIVIIIDSLFAIFYFAI 371 QS+ + +D+LF + Y + Sbjct: 291 AQSVIACVALDALFIVIYLVL 311 >gi|302327111|gb|ADL26312.1| putative ABC transporter, permease protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 262 Score = 160 bits (405), Expect = 4e-37, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 111/250 (44%), Gaps = 9/250 (3%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 ++ L + S+ FK ++I Q ++ GV P + ++ + G V+ Sbjct: 1 MGQLIALFLRTVASLFDKSHNFKSDSRNIILQTFFTGVEIFPPLFAVATLFGTVVIIYLF 60 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + + G L+ ++ +RE+ + TA +IAGR+GS++ IGSM IN E+DA+ TM Sbjct: 61 SLMGKMGFSNNIGFLIVVIIIRELSPIFTAFLIAGRTGSSLTTYIGSMVINSEVDALATM 120 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV--------FFS 299 G++ +R L+ P + I++ ++ I+ + SAI ++ I + S Sbjct: 121 GINPIRYLVMPSVIGGTIAMIIMNIIFSTSAIGAGFLLTKGIIFITGNAPNVQITWSYLS 180 Query: 300 R-FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 T + ++K I I A + + + K + V+ S ++ Sbjct: 181 TEIIKALTKPDFVFAIVKPLIFGIIITINACYQALNIKRDIRQVPKATSRSVIMSFLYIV 240 Query: 359 IIDSLFAIFY 368 D+LF +++ Sbjct: 241 FTDALFLMYF 250 >gi|262202880|ref|YP_003274088.1| hypothetical protein Gbro_2987 [Gordonia bronchialis DSM 43247] gi|262086227|gb|ACY22195.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247] Length = 288 Score = 160 bits (405), Expect = 4e-37, Method: Composition-based stats. Identities = 42/265 (15%), Positives = 97/265 (36%), Gaps = 10/265 (3%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVS-------- 166 + +G +I+ +S F+ + + R + V Sbjct: 15 EAAKGLYRGPRDALAAMGHLITFLVRSISSVPLAFRHYSKEVWRLLADVAWGNGAIVVGG 74 Query: 167 -GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 V V++++ + GA + + L+ G + L + REI LL A +SG Sbjct: 75 GTVGVMVILGIMGGATVGIEAYTALNLLGMAPVTGGLSAFATTREIAPLLAATAFTAQSG 134 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 A++GSM+I EEIDA+ + + + L++ R+ A ++++ L ++ + I ++ Sbjct: 135 CRFTAQLGSMRIAEEIDALEAIAIRPLPYLVTTRMLAAVLAIVPLYSVSLAANYIACQVM 194 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + F ++ IK + G+ +G Sbjct: 195 FQFQSGQGAGTYLYYFTQFLVSWDVVFSFIKVIIFVLLTTFIQCYYGYFASGGPEGVGVA 254 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 + +I +++ + + + ++ Sbjct: 255 AGHAIRLAIIVIVFANLVMTLVFWG 279 >gi|145221308|ref|YP_001131986.1| hypothetical protein Mflv_0713 [Mycobacterium gilvum PYR-GCK] gi|315441804|ref|YP_004074683.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|145213794|gb|ABP43198.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] gi|315260107|gb|ADT96848.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 265 Score = 160 bits (405), Expect = 4e-37, Method: Composition-based stats. Identities = 46/240 (19%), Positives = 96/240 (40%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +G + ++++ I Q +++ + +S ++ Sbjct: 18 GLLAVGGFVRMCVLVGKATFRTPFQWREFILQSWFLLRVAFLPTVAVSIPLTVLLIFTLN 77 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L++FGA S ++ + ++G L+T +++AG +AI A++G+ I EEIDA+ + Sbjct: 78 ILLTEFGAADISGAGAALGAVTQLGPLVTVLVVAGAGSTAICADLGARTIREEIDALEVL 137 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+D + L+ PR+ A LL ++G I ++ + S L Sbjct: 138 GIDPIHRLVVPRVIASTFVAMLLNGAVITIGLVGGFIFGVYLQNVSAGAYVSTLTLVTGL 197 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + L+KA G+V G V + +G V +V + + ++ + Sbjct: 198 PEVLISLVKALTFGLIAGLVGCYRGLTVAGGAKGVGTAVNETLVLCVIALFAVNVVLTTI 257 >gi|118469614|ref|YP_884548.1| hypothetical protein MSMEG_0132 [Mycobacterium smegmatis str. MC2 155] gi|118170901|gb|ABK71797.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length = 266 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 44/243 (18%), Positives = 96/243 (39%), Gaps = 4/243 (1%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + + +++K F+L Q +++ + +S +I Sbjct: 20 LATVGGFFKMSVMTGKALFTRPFQWKEFVL----QSWFLIRVAFLPTLAVSIPLTVLIIF 75 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 L++FGA S ++ + ++G L+T +++AG +AI A++G+ + EEIDA+ Sbjct: 76 TLNILLAEFGAADVSGAGAALGAVTQLGPLVTVLVVAGAGSTAICADLGARTVREEIDAL 135 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 +G+D + L+ PR+ A +L ++G ++ + S Sbjct: 136 EVLGIDPIERLVVPRVVASTFVAFMLNGAVITIGLVGGFFFGVYIQNVSAGAYVSTLTLL 195 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + ++KA G+V G V S +G V +V + + ++ + Sbjct: 196 TGFPEVLISVVKATLFGMIAGLVGCYRGLTVAGGSKGVGTAVNETLVLCVVALFAVNVVL 255 Query: 365 AIF 367 Sbjct: 256 TTI 258 >gi|254488593|ref|ZP_05101798.1| membrane protein [Roseobacter sp. GAI101] gi|214045462|gb|EEB86100.1| membrane protein [Roseobacter sp. GAI101] Length = 254 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 109/254 (42%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + + +G V ++ + + +G +PVV L + Sbjct: 1 MAALGRLTLAALATIGSVTLFACSALVHIFRPPFYAGQFGTALVQIGWLSLPVVGLTALF 60 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG + Q ++F AE +++I +RE+G +L +M+A R +AI AEI +MK+ Sbjct: 61 TGGALVMQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMVAARVTAAIAAEIATMKV 120 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++DA+ T+ D +R L PR+ A ++++PLL + + I+G V + Sbjct: 121 TEQLDALITLSTDPMRYLTVPRVLAALLAVPLLVAVGDIIGIMGGYFVATGSLGFSSGAY 180 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + +I + LIK ++ G G + +G+ + V + ++ Sbjct: 181 LRNTVNFLEPLDIASSLIKGTAFGLIAALMGCYFGLNAGRGARGVGRATKSAVEAAAILI 240 Query: 358 IIIDSLFAIFYFAI 371 + + + FA+ Sbjct: 241 LAANFILTAVIFAL 254 >gi|120401387|ref|YP_951216.1| hypothetical protein Mvan_0362 [Mycobacterium vanbaalenii PYR-1] gi|119954205|gb|ABM11210.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 284 Score = 160 bits (404), Expect = 5e-37, Method: Composition-based stats. Identities = 57/251 (22%), Positives = 106/251 (42%), Gaps = 9/251 (3%) Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGV 165 Y ++ N+ QA + + ++ G LL LI QM V Sbjct: 14 YRAAHEVAAGWNELGDQARFYAGTLRAVPDAVR---RYPGELLRLIAQMGLGTGALAVVG 70 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 V +V ++ TGA++A QG Q + G E + + +R I TAV ++ G Sbjct: 71 GTVAIVGFLTITTGALVAVQGYNQFASVGVEALTGFASAFFNVRLIVPGTTAVALSATIG 130 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 + A++G+M+INEEIDA+ +G+ V L + R+ A ++ + L +A A + A Sbjct: 131 AGATAQLGAMRINEEIDALEVIGIRSVTYLAATRVLAGVVVVIPLYCIAVMMAFLAARTG 190 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 Y V+ F++ ++ +++ + + +V G+ +G+ Sbjct: 191 TTVIYGQGSGVYDHYFNTFLNPTDLVWSFLQSVAITVVVMLVHTYYGYTARGGPAGVGEA 250 Query: 346 VTTCVVQSISI 356 V V S+ + Sbjct: 251 VGRAVRTSMVV 261 >gi|41407948|ref|NP_960784.1| hypothetical protein MAP1850 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118466872|ref|YP_881589.1| ABC-transporter integral membrane protein [Mycobacterium avium 104] gi|254775058|ref|ZP_05216574.1| ABC-transporter integral membrane protein [Mycobacterium avium subsp. avium ATCC 25291] gi|41396302|gb|AAS04167.1| hypothetical protein MAP_1850 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118168159|gb|ABK69056.1| ABC-transporter integral membrane protein [Mycobacterium avium 104] Length = 287 Score = 160 bits (404), Expect = 5e-37, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 101/253 (39%), Gaps = 6/253 (2%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVILISFVT 178 H+L + + ++ G L L+ + + VG V +++ Sbjct: 27 VIRLGHLLVFFVRALVAVPLALRQYSGEFLRLLSNITWGNGSIVVGGGTAGVAVVLGMTV 86 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA++ +G L G + + S++ RE+ L+ ++ A + G A++GSM+I Sbjct: 87 GALVGIEGYNFLDLLGLGPATGFVSSLVNTRELAPLMASLAFAMQGGCRFTAQLGSMRIA 146 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ ++ + + L++ R+ A ++++ L + IV+ + Sbjct: 147 EEIDAMESIAIRPIPYLVTTRLIASVVAIVPLYAACLAIGYLSTQIVVSIGSGGSTGSYL 206 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 F +I L KA + G+ +G + SI++VI Sbjct: 207 HYFTLMLAGQDIVYSLFKAVVFVWIASTIQCYYGYYASGGPEGVGVAAGHGMRASITVVI 266 Query: 359 IIDSLFAIFYFAI 371 I++ L + + + Sbjct: 267 IVNMLLTMALWGV 279 >gi|289645180|ref|ZP_06477195.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] gi|289505005|gb|EFD26088.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] Length = 283 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 55/257 (21%), Positives = 107/257 (41%), Gaps = 2/257 (0%) Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 G S LG + T + + ++RQ + +S ++ + Sbjct: 19 GTGSFGSYTGEGSLIRDLGEIARFTVTSVRRMPGVRHYGSEVLRQAGIMILSSSGIIWFM 78 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 + A + +G + LSQ GA ++ S + + +++ + +VAE+GS Sbjct: 79 MGMLAAEASLEGHYLLSQLGAGSYTGVFTSTADYT-VAPEMWGWILSAKVACGLVAELGS 137 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV-IWKYYDIP 293 M+I+EEIDA+ MGLD LIS R+ A+II P + ++ ++ + ++ + Sbjct: 138 MRISEEIDALEVMGLDPHSYLISTRLLAVIIITPFMFMIGTGIMYGVQYVLNVHVFHSVS 197 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 + S F + T ++ L M I V G+ +GK +V + Sbjct: 198 AGGYLSVFWAFQTQQDVLLSLAMGAIMGMMIVTVGCYYGYTASGGPVGVGKNTAKSMVIN 257 Query: 354 ISIVIIIDSLFAIFYFA 370 + IV ++ ++F +F Sbjct: 258 LVIVSVVGAVFQQMFFG 274 >gi|254818326|ref|ZP_05223327.1| hypothetical protein MintA_00280 [Mycobacterium intracellulare ATCC 13950] Length = 255 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 47/240 (19%), Positives = 104/240 (43%), Gaps = 1/240 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 A +G + + + + ++ + Q +++ + +L++ +++ Sbjct: 9 AQAIGGLFAMSADAVKFLFQRPFQWREFLEQSWFIARVAIAPTLLVAIPFTVLVSFTLNI 68 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L + GA S + + +IG ++T +++AG +A+ A++GS I EEIDA+ +G Sbjct: 69 LLRELGAADLSGAGAAFGAVTQIGPMVTVLIVAGAGSTAMCADLGSRTIREEIDAMEVLG 128 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ V+ L++PR+ A + LL L I+G D+ F + + Sbjct: 129 INPVQRLVTPRMLAAGLVALLLNSLVVIIGIVGGYAFSVFIQDVNPGAFAAGITLLTGVP 188 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + +KA G+VA G G + ++G V VV + +++++ + Sbjct: 189 EVIISCVKAALFGLIAGLVACYRGLTITGGGAKAVGNAVNETVVYAFMSLMVVNVVVTAI 248 >gi|118469369|ref|YP_889051.1| ABC transporter transmembrane protein [Mycobacterium smegmatis str. MC2 155] gi|118170656|gb|ABK71552.1| ABC-transporter integral membrane protein [Mycobacterium smegmatis str. MC2 155] Length = 282 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 48/226 (21%), Positives = 98/226 (43%), Gaps = 6/226 (2%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVILISFVTGAVIAQQGA 187 + ++ ++ L+ LI ++ + V +V ++ TG V+A QG Sbjct: 31 FYLRAIAGTPHAALHYRKELVRLIAEISMGAGTLAMIGGTVVIVGFLTLATGGVLAIQGY 90 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L G E + L + + +R ++ + +A G+ + A++G+M+INEEIDA+ +M Sbjct: 91 SSLGNIGIEALTGFLSAFINVRIAAPVVAGIGLAATFGAGVTAQLGAMRINEEIDALESM 150 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 + V L+S RI A +I++ L +A + + + ++ F + Sbjct: 151 AIRPVEYLVSTRIVAGMIAITPLYAIAVILSFLASQFTTVVLLGQSGGLYNHYFDTFLNP 210 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 ++ ++A MA I ++ G+ + +G V V S Sbjct: 211 IDLLWSFLQAILMAITILLIHTYFGYFASGGPSGVGVAVGNAVRTS 256 >gi|296169578|ref|ZP_06851198.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895844|gb|EFG75539.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 287 Score = 159 bits (403), Expect = 6e-37, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 102/249 (40%), Gaps = 10/249 (4%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVSG-------- 167 ++ + I +G G+ A + + + +IR + + + Sbjct: 15 RLTRQIEKPVGTLGRIGDHTLFYGKALAGVPFAVRHYRREVIRLIAEISMGAGTLAMIGG 74 Query: 168 -VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + +V ++ G +A QG L G E + L + + +R ++ + +A G+ Sbjct: 75 TLVIVGFLTLAAGGTLAVQGYSSLGNIGIEALTGFLAAFINVRIAAPIVAGIGLAATFGA 134 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 + A++G+M+INEEIDA+ +M + + L+S RI A ++++ L +A + + + Sbjct: 135 GVTAQLGAMRINEEIDALESMAIRPISYLVSTRIAAGMMAITPLYSIAVILSFLASQFTT 194 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + ++ F + ++ ++A MA I ++ G+ +G Sbjct: 195 VVLFGQSGGLYQHYFTTFLNPIDLLWSFLQAVLMAITILLIHTYFGYFASGGPAGVGVAT 254 Query: 347 TTCVVQSIS 355 V S+ Sbjct: 255 GNAVRTSLI 263 >gi|226304168|ref|YP_002764126.1| YrbE family protein [Rhodococcus erythropolis PR4] gi|226183283|dbj|BAH31387.1| putative YrbE family protein [Rhodococcus erythropolis PR4] Length = 259 Score = 159 bits (403), Expect = 6e-37, Method: Composition-based stats. Identities = 62/248 (25%), Positives = 107/248 (43%), Gaps = 4/248 (1%) Query: 125 SCSQAHILGLVISNTGEFCASSY----KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + +GL+ + T C +++ + + QM+++ L+ G Sbjct: 2 FSNLLSEIGLLFTFTVRVCVAAFTTLRHKRLAWREALDQMWFLAHVTSVASALVMIPLGV 61 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 +A Q Q GA +S +++ L + + G L+ A++IAG GSAI A++G+ I EE Sbjct: 62 GVALQIGSLADQIGAGSYSGAVVAFLIIGQAGPLVCALIIAGVGGSAICADLGARTIREE 121 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ +GL + L+ PR+ A+ + LL + + + V D F Sbjct: 122 IDALEVLGLPVLERLVVPRMIAIAVVCLLLNSIVLVIGLGASLFVHVLILDGNAQSFLRN 181 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + ++ IKA A GIVA +G V + +G V VV S +V + Sbjct: 182 LVQFSQPSDFVVSGIKAVAFALISGIVACYKGLTVKRGAQGVGDAVNETVVLSFVLVFVA 241 Query: 361 DSLFAIFY 368 + FY Sbjct: 242 NLAITQFY 249 >gi|120402601|ref|YP_952430.1| hypothetical protein Mvan_1595 [Mycobacterium vanbaalenii PYR-1] gi|119955419|gb|ABM12424.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 280 Score = 159 bits (403), Expect = 6e-37, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 111/266 (41%), Gaps = 9/266 (3%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VG 164 + + ++ QA G +++ ++ LI +M + V Sbjct: 9 LRRAFRHTPRLVDIFGEQALFYGQSLASLPLAVRL---YRRETARLIAEMAFGAGGLLVI 65 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 + V + ++ +G VIA QG L G E + L + L +R + ++ + +A Sbjct: 66 GGTLGVTVFLTLASGGVIAVQGYASLGDIGIEALTGFLSAFLNVRIVAPVIAGIALAATI 125 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 G+ A++G+M+I EEIDA+ M + + L++ R+ A +I + L LA ++ A Sbjct: 126 GAGSTAQLGAMRIAEEIDALEVMAVRSMAYLVATRMIAGVIVIVPLYSLAILTSFFSARF 185 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 ++ F++ ++ ++A M+ A+ +V G+ +G Sbjct: 186 TTVYLSGQSRGLYDHYFNTFLIPTDLLWSFLQAIAMSIAVMLVHTYYGYNAKGGPVGVGV 245 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370 V S+ +V++I L ++ + Sbjct: 246 ATGDAVRTSLIVVVVITLLISLAVYG 271 >gi|183983838|ref|YP_001852129.1| integral ABC-type transport protein [Mycobacterium marinum M] gi|183177164|gb|ACC42274.1| conserved hypothetical integral ABC-type transport protein [Mycobacterium marinum M] Length = 287 Score = 159 bits (403), Expect = 7e-37, Method: Composition-based stats. Identities = 51/273 (18%), Positives = 112/273 (41%), Gaps = 10/273 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCA----SSYKFKGFLLSLIRQMYY-- 162 I +++V+ + LG ++ A + +++G L L+ + + Sbjct: 7 RPLAPITEQVVRLYRRTTKPIIRLGHMLVFFFRALAGVPIAVRQYRGEFLRLLSNITWGN 66 Query: 163 ----VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 VG V +++ GA++ +G L G + + S++ RE+ L+ ++ Sbjct: 67 GSIVVGGGTAGVAVVLGMTVGALLGIEGYNFLDLLGLGPATGLISSLVNTRELAPLMASL 126 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 A ++G A++GSM+I EEIDA+ ++ + + L++ R+ A I+++ L Sbjct: 127 AFAMQAGCRFTAQLGSMRIAEEIDAMESIAIRPIPFLVTTRLVASIVAMIPLYAACLAIG 186 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 + +V+ + F +IF L+K + GF Sbjct: 187 YLTTQVVVGISSGGSTGSYLHYFSLMLAGQDIFYSLLKTVIFVWIASTIQCYYGFYASGG 246 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +G + SI++VI+++ L + + + Sbjct: 247 PEGVGVAAGHGMRASITVVIMVNMLITMALWGV 279 >gi|312137896|ref|YP_004005232.1| integral membrane protein yrbe1b [Rhodococcus equi 103S] gi|325673337|ref|ZP_08153029.1| ABC superfamily ATP binding cassette transporter, permease protein [Rhodococcus equi ATCC 33707] gi|311887235|emb|CBH46544.1| putative integral membrane protein YrbE1B [Rhodococcus equi 103S] gi|325555927|gb|EGD25597.1| ABC superfamily ATP binding cassette transporter, permease protein [Rhodococcus equi ATCC 33707] Length = 285 Score = 159 bits (403), Expect = 7e-37, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 108/261 (41%), Gaps = 9/261 (3%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPV 170 +V + D + + +++ +L+ I ++ + G + + Sbjct: 19 AVVDGLADVGRHVTFFFRTLVSLPYAAT---RYRKHVLAQISEVSFGTNSVLSGGGTIGI 75 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 V +S ++ + L G S L +I RE+ ++ A+ +A + G+ A Sbjct: 76 VFAMSLAAAMMLGVETQRGLELVGMTTLSGMLSAIANTRELAPVVVAIALAAKVGTGFTA 135 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 ++G+M+I++EIDA+ +MG+ + L R+ A ++ + + ++ ++ + +VI + Sbjct: 136 QLGAMRISDEIDALDSMGVRSIPFLAGTRVLAAMVCVLPIFMIGLLASYLSTRLVIVVWG 195 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 + FH + ++ IKA A + +V G+ +G+ + Sbjct: 196 GASAGTYDYFFHLALSPVDLVYAAIKAIVFAGVVALVHCSYGYFASGGPAGVGQAAGRAL 255 Query: 351 VQSISIVIIIDSLFAIFYFAI 371 +I + ++D L + + Sbjct: 256 RTAILAIGVLDVLMTFALWGL 276 >gi|296141464|ref|YP_003648707.1| hypothetical protein Tpau_3790 [Tsukamurella paurometabola DSM 20162] gi|296029598|gb|ADG80368.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM 20162] Length = 284 Score = 159 bits (402), Expect = 8e-37, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 88/199 (44%) Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 ++ +GA +A + L+ G + + + +RE+ + + A ++G + A+I Sbjct: 78 ILGAASGAAVAIEAYAGLNLIGFGPLTGVIGGLANIREMIPISAGIGFAAQAGCRMTAQI 137 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 GSM+I EEIDA+ +G+ + ++S R+ A I+ + +L A + +++ ++ Sbjct: 138 GSMRIAEEIDAVEALGIRSIPYVVSTRLIAGIVVVIPAYLLTLLLAFLTCKLIVVVFHGQ 197 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 + F + +I +KA A+ I+ G+ +G V Sbjct: 198 AQGTYNHYFEQFLSPGDILLSTVKAVVFCAAVTIIHCYYGYFAKGGPEGVGLASGRAVRA 257 Query: 353 SISIVIIIDSLFAIFYFAI 371 S+ V+ +D + I + + Sbjct: 258 SLVTVLTLDFILTIVMWGV 276 >gi|226306858|ref|YP_002766818.1| YrbE family protein [Rhodococcus erythropolis PR4] gi|226185975|dbj|BAH34079.1| putative YrbE family protein [Rhodococcus erythropolis PR4] Length = 257 Score = 159 bits (402), Expect = 8e-37, Method: Composition-based stats. Identities = 47/243 (19%), Positives = 98/243 (40%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG + ++ + + + Q + + + +L++ +++ Sbjct: 8 LAGPMRELGQFYRMGADVAVGLFRTRFQVQEFLEQSWMIARVSIVPTVLVAVPFTVLVSF 67 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 L + GA S ++ + ++G ++T +++AG +AI A++GS I EEIDA+ Sbjct: 68 TLNILLREIGAADLSGAGAALGAVTQVGPVVTVLIVAGAGATAIAADLGSRTIREEIDAM 127 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 +G+D + L+ PR+ A + LL L I G + F Sbjct: 128 EVLGIDPINRLVIPRVVASTVVALLLNGLVCVIGIAGGYAFSVFLQGVNPGAFVEGITLL 187 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L + ++KA G+VA G +V +G+ V VV + + +++++ Sbjct: 188 TGLPEVALSMVKAALFGMLAGLVACYRGLSVRGGPKGVGEAVNETVVYAFMALFVVNTIV 247 Query: 365 AIF 367 Sbjct: 248 TAV 250 >gi|226365582|ref|YP_002783365.1| YrbE family protein [Rhodococcus opacus B4] gi|226244072|dbj|BAH54420.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 269 Score = 159 bits (402), Expect = 8e-37, Method: Composition-based stats. Identities = 52/242 (21%), Positives = 103/242 (42%) Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 ++G I+ + K L+ Q + + +L+ G +IA Sbjct: 21 ALIGFSIATAVAAVRVVVRRKLAWRELLDQAWRIASVTSAPALLLMIPIGVLIAVTIGSL 80 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 Q GAE ++ ++ + + + L+ A+M+AG GSAI A++GS I EE++A+ +GL Sbjct: 81 AGQLGAEGYTGAVVGFVIVGQASALVCALMLAGVGGSAICADLGSRTIREEVEAMEVLGL 140 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 D + L+ PR+ A +I L + + + + F + L++ Sbjct: 141 DVIERLVVPRVLAAVIVGVALCAMVTAVGVSACFLFQVVVQNSSAGSFLAALSQYTRLSD 200 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 L+K+ A +VA +G + + V VV + +V I++++ + Y Sbjct: 201 FVVALVKSMAFAVTSALVASFKGLHAKGGPSGVADAVNEAVVLAFILVFIVNTVLSQLYS 260 Query: 370 AI 371 + Sbjct: 261 VL 262 >gi|254819658|ref|ZP_05224659.1| ABC-transporter integral membrane protein [Mycobacterium intracellulare ATCC 13950] Length = 281 Score = 159 bits (402), Expect = 8e-37, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 102/253 (40%), Gaps = 6/253 (2%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVILISFVT 178 H+L + + ++ G L L+ + + VG V +++ Sbjct: 21 IIRLGHLLVFFVRAAVAVPLAVRQYSGEFLRLLSNITWGNGSIVVGGGTAGVAVVLGMTV 80 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA++ +G L G + + S++ RE+ L+ ++ A + G A++GSM+I Sbjct: 81 GALVGIEGYNFLDLLGLGPATGFVSSLVNTRELAPLMASLAFAMQGGCRFTAQLGSMRIA 140 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ ++ + + L++ R+ A ++++ L + +V+ + Sbjct: 141 EEIDALESIAIRPIPYLVTTRLIASVVAIIPLYAACLAIGYLSTQVVVGIGSGGSTGSYL 200 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 F +I LIKA + G+ +G + SI++VI Sbjct: 201 HYFTLMLAGQDIVYSLIKAVIFVWIASTIQCYYGYYASGGPEGVGVAAGHGMRASITVVI 260 Query: 359 IIDSLFAIFYFAI 371 I++ L + + + Sbjct: 261 IVNMLLTMALWGV 273 >gi|183980442|ref|YP_001848733.1| integral membrane protein YrbE1B [Mycobacterium marinum M] gi|183173768|gb|ACC38878.1| conserved hypothetical integral membrane protein YrbE1B [Mycobacterium marinum M] Length = 289 Score = 159 bits (402), Expect = 9e-37, Method: Composition-based stats. Identities = 60/257 (23%), Positives = 116/257 (45%), Gaps = 12/257 (4%) Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 R+ F + N + + G + + +++S A ++++ G+ + ++ +L LI Q Sbjct: 8 RARFPRAIANFNRYAG-SVTRGLDESGRLAWF---ILTSLGQSGHALRYYRKEILRLIAQ 63 Query: 160 MYYVGVSGVPVVILISFVTGAV-------IAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 + +G + VV + + G V IA QG L G E F+ +++ +R G Sbjct: 64 IG-MGTGAMAVVGGTAAIVGFVTLSGSSLIAIQGFASLGNIGVEAFTGFFSALVNVRIAG 122 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 ++T V +A G+ AE+G+M+I+EEIDA+ MG+ + L S RI A ++ + L Sbjct: 123 PVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISYLASTRIMAGLVVIIPLYA 182 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 LA + +V Y + F + ++F ++A +A + + G Sbjct: 183 LAMIMSFFSPQMVTTVLYGQSSGTYEHYFRTFLRPDDVFWSFLEAIIIAAIVMVTHCYYG 242 Query: 333 FAVGVHSNSLGKKVTTC 349 + G +G+ V Sbjct: 243 YNAGGGPVGVGEAVGRS 259 >gi|118467326|ref|YP_879397.1| ABC transporter transmembrane protein [Mycobacterium avium 104] gi|254773147|ref|ZP_05214663.1| ABC-transporter integral membrane protein [Mycobacterium avium subsp. avium ATCC 25291] gi|118168613|gb|ABK69510.1| ABC-transporter integral membrane protein [Mycobacterium avium 104] Length = 285 Score = 158 bits (401), Expect = 9e-37, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 107/253 (42%), Gaps = 6/253 (2%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVILISFVT 178 + H+L + +++ L L+ + + VG V +++ F Sbjct: 25 TMRLGHMLVFFVRAVLAVPTVLRQYRTEFLRLLSNIAWGNGSIVVGGGTAGVAVVLGFTA 84 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA++A +G L+ G + + S++ RE+ ++ ++ A ++G A++G+M+I Sbjct: 85 GALVAVEGYNFLNLLGLGPATGIISSLVNTRELAPIMASLAFAMQAGCRFTAQLGAMRIA 144 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ ++ + + L++ R+ A +I++ L I + +V + Sbjct: 145 EEIDALESLAIRPIPFLVTTRLMASVIAVIPLYIACLAVTYLTCQVVANIISGGSIGPYL 204 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 F + +I ++K V GF +G + SI++VI Sbjct: 205 HYFTMMLSAKDIAYSVLKCVVFVWLSSTVQCYYGFYAAGGPEGVGVAAGHAMRASITVVI 264 Query: 359 IIDSLFAIFYFAI 371 +++ L + ++I Sbjct: 265 MVNMLLTMALWSI 277 >gi|50261859|gb|AAT72482.1| AT1G19800 [Arabidopsis lyrata subsp. lyrata] Length = 205 Score = 158 bits (401), Expect = 9e-37, Method: Composition-based stats. Identities = 44/181 (24%), Positives = 90/181 (49%) Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198 G+ K K + ++Q+ G + V +L S G Q + ++ G Sbjct: 25 AGQVVLRILKGKIHWRNTLQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFTRLGLNRS 84 Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258 ++++ RE+ ++T++++AGR GSA AE+G+M+++E+ D +R +G D + LI+P Sbjct: 85 IGGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADPIDYLITP 144 Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318 R+ A ++LP LT++ + ++++ Y I + H +I + +IK+ Sbjct: 145 RVIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMDSAHRALRPWDIVSAMIKSQ 204 Query: 319 F 319 Sbjct: 205 V 205 >gi|222055776|ref|YP_002538138.1| protein of unknown function DUF140 [Geobacter sp. FRC-32] gi|221565065|gb|ACM21037.1| protein of unknown function DUF140 [Geobacter sp. FRC-32] Length = 257 Score = 158 bits (401), Expect = 1e-36, Method: Composition-based stats. Identities = 74/260 (28%), Positives = 135/260 (51%), Gaps = 8/260 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR-QMYYVGVSGV 168 + +GK I+K + + ++ +I S + + +++++R Q+Y+ G+ + Sbjct: 1 MITALGKWILKLL---LTGMGLVETIIQAFRNLFLSFKQGRRPIMAVLRKQIYFTGLESL 57 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGA-EIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V+++IS G VI +S GA E + ++ + +RE+G +LTA++I RSG+A Sbjct: 58 KVIVIISVTIGIVI---ITQIISLVGANETLTGRVLVWVIIRELGPVLTAIIIIARSGTA 114 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I E+G MKIN EI++I ++G+ R LI PRI + S+ +LTI +AI+G IV Sbjct: 115 IATELGYMKINNEIESIESLGIPADRYLIMPRIIGVTTSVVILTIYFEIAAILGGFIVAA 174 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + +PF F S T+ + IK+ F + + G VG + + + T Sbjct: 175 IGWHVPFDKFAQSIFSILTIKELGMSFIKSLFFGLFLSAACCRHGLGVGKSATQIPQAAT 234 Query: 348 TCVVQSISIVIIIDSLFAIF 367 V+QS+ +V ++D + + Sbjct: 235 KGVMQSLFLVFVLDGVITLI 254 >gi|120405105|ref|YP_954934.1| hypothetical protein Mvan_4151 [Mycobacterium vanbaalenii PYR-1] gi|119957923|gb|ABM14928.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 285 Score = 158 bits (401), Expect = 1e-36, Method: Composition-based stats. Identities = 54/251 (21%), Positives = 109/251 (43%), Gaps = 10/251 (3%) Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY--- 162 F L H+G+ + ++ G I G ++ F+ ++ LI ++ Sbjct: 10 RFPRLVDHLGRPV-ALLSRLGDHVLFYGRAI---GGVPHAAVHFRKEIVRLIAEISMGAG 65 Query: 163 ---VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219 + V +V ++ G +A QG L G E + L + + +R ++ + Sbjct: 66 TLAMIGGTVVIVGFLTLAAGGTLAIQGYSSLGNIGIEALTGFLAAFINVRIAAPVVAGIG 125 Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279 +A G+ + A++G+M+INEEIDA+ +MG+ V L+S RI A ++++ L +A + Sbjct: 126 LAATFGAGVTAQLGAMRINEEIDALESMGIRPVEYLVSTRIVAGMVAIAPLYSIAVILSF 185 Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339 + + + ++ F + ++ ++A MA AI +V G+ Sbjct: 186 VASQFTTVVLFGQSGGLYDHYFDTFLNPIDLLWSFLQAVLMAIAILLVHTYFGYFASGGP 245 Query: 340 NSLGKKVTTCV 350 + +G V V Sbjct: 246 SGVGAAVGNAV 256 >gi|120401386|ref|YP_951215.1| hypothetical protein Mvan_0361 [Mycobacterium vanbaalenii PYR-1] gi|119954204|gb|ABM11209.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 256 Score = 158 bits (401), Expect = 1e-36, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 106/243 (43%), Gaps = 4/243 (1%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + I + F+ ++L Q ++V V ++++ ++ Sbjct: 11 LRGVGGFFAMSIDTFVAMVRPPFAFREYVL----QSWFVARVSVLPALMLTLPYSVLLVF 66 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 L +FGA F+ +I + +IG ++T ++++G +A+ A++G+ I EE+DA+ Sbjct: 67 TFNILLKEFGAADFAGTGAAIGTVSQIGPIVTVLVVSGAGATAMCADLGARTIREELDAM 126 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 + MG++ ++ L+ PR+ A L+ + + GA ++ F S Sbjct: 127 KVMGINPIQALVVPRVLAATTVALALSATVIIAGLAGAFFFCVFVQNVSAGAFISGMTLL 186 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A++F L KA A G++A +G +VG +G V VV + ++ I+ + Sbjct: 187 TGAADVFVSLAKATLFGLAAGLIACYKGISVGGGPAGVGNAVNETVVFTFMVLFAINVIA 246 Query: 365 AIF 367 Sbjct: 247 TAV 249 >gi|229492731|ref|ZP_04386532.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229320390|gb|EEN86210.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length = 257 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 47/243 (19%), Positives = 98/243 (40%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG + ++ + + + Q + + + +L++ +++ Sbjct: 8 LAGPMRELGQFYRMGADVAVGLFRTRFQMQEFLEQSWMIARVSIVPTVLVAVPFTVLVSF 67 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 L + GA S ++ + ++G ++T +++AG +AI A++GS I EEIDA+ Sbjct: 68 TLNILLREIGAADLSGAGAALGAVTQVGPVVTVLIVAGAGATAIAADLGSRTIREEIDAM 127 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 +G+D + L+ PR+ A + LL L I G + F Sbjct: 128 EVLGIDPITRLVIPRVVASTVVALLLNGLVCVIGIAGGYAFSVFLQGVNPGAFVEGITLL 187 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L + ++KA G+VA G +V +G+ V VV + + +++++ Sbjct: 188 TGLPEVALSMVKAALFGMLAGLVACYRGLSVRGGPKGVGEAVNETVVYAFMALFVVNTIV 247 Query: 365 AIF 367 Sbjct: 248 TAV 250 >gi|254818556|ref|ZP_05223557.1| ABC-transporter integral membrane protein [Mycobacterium intracellulare ATCC 13950] Length = 285 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 107/253 (42%), Gaps = 6/253 (2%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVILISFVT 178 + H+L + +++ L L+ + + VG V +++ F Sbjct: 25 TMRLGHMLVFFVRAVLAVPIVLRQYRTEFLRLLSNIAWGNGSIVVGGGTAGVAVVLGFTA 84 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA++A +G L+ G + + S++ RE+ ++ ++ A ++G A++G+M+I Sbjct: 85 GALVAVEGYNFLNLLGLGPATGIISSLVNTRELAPIMASLAFAMQAGCRFTAQLGAMRIA 144 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ ++ + + L++ R+ A +I++ L I + +V + Sbjct: 145 EEIDALESLAIRPIPFLVTTRLMASVIAVIPLYIACLAVTYLTCQVVANIISGGSIGPYL 204 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 F + +I ++K V GF +G + SI++VI Sbjct: 205 HYFTMMLSTKDIAYSVLKCVVFVWLSSTVQCYYGFYAAGGPEGVGVAAGHAMRASITVVI 264 Query: 359 IIDSLFAIFYFAI 371 +++ L + ++I Sbjct: 265 MVNMLLTMALWSI 277 >gi|118469400|ref|YP_885536.1| ABC transporter transmembrane protein [Mycobacterium smegmatis str. MC2 155] gi|118170687|gb|ABK71583.1| ABC-transporter integral membrane protein [Mycobacterium smegmatis str. MC2 155] Length = 285 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 111/277 (40%), Gaps = 9/277 (3%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 S + + G++ K I ++ ++G + L+ + Sbjct: 4 SPYVPTLLAPWVRFGQRASKPIVRLGHMLVFFVRAVAAIPIVLRH---YRGEFVRLLSDI 60 Query: 161 YY------VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 + VG V +++ GA++ +G L G + + S++ RE+ + Sbjct: 61 AWGNGSLVVGGGTAGVAVVLGITVGALVGIEGYNFLDLLGLGPATGIISSLVNTRELAPI 120 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 ++ A ++G A++GSM+I EEIDA+ ++ + + L++ R+ A ++++ L ++ Sbjct: 121 AASLAFATQAGCRFTAQLGSMRIAEEIDALDSIAIRPIPYLVTTRLMAAVVAVIPLYVMC 180 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 + + V++ + F + +I L+K V GF Sbjct: 181 LAVSYLTTQTVVFLISGGSTGSYLHYFTLMLSGQDILYSLLKTIIFVWIASTVQCYYGFY 240 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +G + SI++VII++ L + +++ Sbjct: 241 ASGGPVGVGVAAGHAMRASITVVIIVNMLLTMALWSV 277 >gi|108801581|ref|YP_641778.1| hypothetical protein Mmcs_4618 [Mycobacterium sp. MCS] gi|119870735|ref|YP_940687.1| hypothetical protein Mkms_4706 [Mycobacterium sp. KMS] gi|108772000|gb|ABG10722.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119696824|gb|ABL93897.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] Length = 280 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 57/273 (20%), Positives = 115/273 (42%), Gaps = 10/273 (3%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM--- 160 +++ L G + ++ QA G I +++ + LI +M Sbjct: 3 FDATVRLRRAFG-WVPGAVDTMGEQALFYGETIRYIPNAVT---RYRKETIRLIAEMTMG 58 Query: 161 ---YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 + V V ++ +G VIA QG L G E + L + L +R + ++ Sbjct: 59 AGALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAG 118 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 + +A G+ A++G+M++ EEIDA+ TM + V L+S R+ A +I++ L L+ + Sbjct: 119 IALAATIGAGTTAQLGAMRVAEEIDAVETMAVHSVSYLVSTRLMAGLIAIVPLYSLSVLA 178 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 A A ++ F++ +++ ++A M+ A+ +V G+ Sbjct: 179 AFFAARFTTVYINGQSAGLYDHYFNTFLVPSDLLWSFLQAIVMSIAVMLVHTYYGYNASG 238 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +G V V S+ +V+ I ++ + Sbjct: 239 GPVGVGIAVGQAVRTSLIVVVTITLFISLAVYG 271 >gi|41406856|ref|NP_959692.1| hypothetical protein MAP0758 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395206|gb|AAS03075.1| hypothetical protein MAP_0758 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 281 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 101/245 (41%), Gaps = 7/245 (2%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV-----SGVPV 170 ++ V + A G ++ G A++ + + + G V + Sbjct: 15 ERPVALLAGIGDHALFYGKALA--GMPFAATRYTREVVRLVAEISMGAGTLAMIGGTVVI 72 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 V ++ G +A QG L G E + L + + +R + ++ + +A G+ + A Sbjct: 73 VGFLTLAAGGTLAIQGYTSLGNIGIEALTGFLAAFINVRIVAPVVAGIGLAATFGAGVTA 132 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 ++G+M+INEE+DA+ +M + V L+S RI A ++++ L +A + + + Sbjct: 133 QLGAMRINEEVDALESMAIRPVAYLVSTRILAGMLAITPLYSIAVILSFVASQFTTTFLL 192 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 ++ F++ ++ ++A MA I ++ G+ +G V Sbjct: 193 GQSQGLYQHYFNTFLNPIDLLWSFLQAILMALTILLIHTYYGYFASGGPAGVGNATGNAV 252 Query: 351 VQSIS 355 S+ Sbjct: 253 RTSLI 257 >gi|169631674|ref|YP_001705323.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977] gi|169243641|emb|CAM64669.1| Putative YrbE family protein [Mycobacterium abscessus] Length = 286 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 103/263 (39%), Gaps = 8/263 (3%) Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY-----YVGVSGVP 169 G++I + I I++ Y K F L + G V Sbjct: 18 GQRIAQSIRRLGHMLAFFVEAIASIPNALR--YYSKEFFRLLADVTWGNGSLVTGGGTVG 75 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V ++ GA+I + L+ G + + S++ RE+ ++ A+ A ++G Sbjct: 76 VAAVLGATIGALIGIEAYNLLNIIGLGPATGFISSLVSTRELAPVMAALAFAMQAGCRFT 135 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS-AIIGASIVIWK 288 A++G+ +INEEIDA+ + + + L++ R+ A +++ L +L I +V Sbjct: 136 AQLGAQRINEEIDALDALAIRPIPYLVTTRLLASTVAVVPLYLLCLVISYITCRLLVGIS 195 Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F + ++ +IKA + GF +G Sbjct: 196 SGGSIGGAYNHYFTMMLSGTDVVYSVIKAVVFVWIASTIQCYFGFNASGGPEGVGVAAGH 255 Query: 349 CVVQSISIVIIIDSLFAIFYFAI 371 + +I++VII++ L + + + Sbjct: 256 AMRAAITVVIIVNMLLTMALWGV 278 >gi|120405354|ref|YP_955183.1| hypothetical protein Mvan_4401 [Mycobacterium vanbaalenii PYR-1] gi|119958172|gb|ABM15177.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 250 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 49/236 (20%), Positives = 109/236 (46%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + + + + + +RQ ++V + +L++ ++ L+ Sbjct: 9 LGGLFAMSVDTMVLLSRRPFAWQEFLRQSWFVARVSLLPTLLLAIPFSVLLVFTFNILLT 68 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 +FGA FS + + +IG ++T +++AG +A+ A++G+ I +EIDA+R MG++ Sbjct: 69 EFGAADFSGTGAAYGAVTQIGPIVTVLVVAGAGATAMCADLGARTIRDEIDAMRVMGINP 128 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 ++ L+ PR+ A +L+ +++G+ + ++ F + + ++ Sbjct: 129 LQALVLPRVLAASFVAVMLSSAVILVSLVGSYVFGVFIQNVTPGAFAAGMTLLTGVGDVV 188 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 LIKA G++A +G +VG +G V VV + + I+ + + Sbjct: 189 VALIKAAMFGLCAGLIACYKGLSVGGGPAGVGLAVNETVVFTFMALFGINIVTSAV 244 >gi|145220617|ref|YP_001131295.1| hypothetical protein Mflv_0011 [Mycobacterium gilvum PYR-GCK] gi|145213103|gb|ABP42507.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] Length = 285 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 46/253 (18%), Positives = 105/253 (41%), Gaps = 6/253 (2%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVILISFVT 178 H+L + + ++ + L+ + + VG V I++ Sbjct: 25 IIRLGHMLVFFVRALLGIPVAISHYRKEFVRLLSDIAWGNGSLVVGGGTAGVAIVLGITV 84 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA++ +G L G + + S++ RE+ + ++ A ++G A++GSM+I Sbjct: 85 GALVGIEGYNFLDMLGLGPATGIISSLVNTRELAPIAASLAFATQAGCRFTAQLGSMRIA 144 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ ++G+ + L++ R+ A +I++ L ++ + + V+ + Sbjct: 145 EEIDALESLGIRPIPYLVTTRLMASVIAVIPLYVVCLAVSYLTTQAVVMVISGGSTGSYM 204 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 F + +I ++K V GF +G + SI++VI Sbjct: 205 HYFTLMLSGQDILYSVLKTVIFVWIASTVQCYYGFYASGGPVGVGVAAGHAMRASITVVI 264 Query: 359 IIDSLFAIFYFAI 371 +++ L + +++ Sbjct: 265 MVNMLLTMALWSV 277 >gi|228473179|ref|ZP_04057934.1| conserved hypothetical protein [Capnocytophaga gingivalis ATCC 33624] gi|228275329|gb|EEK14121.1| conserved hypothetical protein [Capnocytophaga gingivalis ATCC 33624] Length = 245 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 51/229 (22%), Positives = 92/229 (40%), Gaps = 2/229 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G E K+ +++++ + + ++ IS GAVIA Q A Sbjct: 4 LEAIGRYFLMLYEIFRKRTKWAMMKRLIMKEIDDLMYGSLGIIAFISLFVGAVIAIQMAL 63 Query: 189 QLSQFGAE-IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + + E T++++AG+ GS I + IG+M++ E+IDA+ M Sbjct: 64 NIDNPLIPKSLIGFATRQTIVLEFAPTFTSIIVAGKVGSFITSSIGTMRVTEQIDALDIM 123 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ + LI P+I AL++ P +A I G I + A F Sbjct: 124 GVNSLNYLIFPKIIALLL-YPFAITMAMALGIYGGYIAATVGHYATSAEFLEGLKLQFRA 182 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +I LIK+ A + + G+ + + +GK T V + Sbjct: 183 FDITYALIKSVIFAFVLATIPAYHGYYMKGGALDVGKASTISFVWTSVA 231 >gi|226361227|ref|YP_002779005.1| YrbE family protein [Rhodococcus opacus B4] gi|226239712|dbj|BAH50060.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 302 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 54/285 (18%), Positives = 120/285 (42%), Gaps = 2/285 (0%) Query: 84 LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFC 143 + + + ++ +GK + + S + G + +N + Sbjct: 9 AVDAVPAGPAQADRSAPEKRRRPRLSV-AAVGKYLKETPIRSLATLGRSGELAANILRYT 67 Query: 144 AS-SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDL 202 S + + L + QM+ + +L++ GA ++ Q ++Q GA + Sbjct: 68 VSDTIALRLPLEEVATQMWKLLKVTALPALLMAVPIGAEVSVQVGGIMNQVGANSLAGAA 127 Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 + + + + ++++G + SAI +++G+ I EEI+AIR MG+D V+ L+ PR A Sbjct: 128 SGLGVVGQGAPMAAGLLMSGAAASAIASDLGARAIREEIEAIRVMGIDPVQRLVVPRFIA 187 Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322 +I P+L I+ + + ++ D+ F+ F S AT ++ ++K+ A Sbjct: 188 MIAIAPMLCIVIVAAGVAAGLVISANVNDVVPGSFWQSFGSFATPTDLVFSVLKSVIFAA 247 Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + ++A G + V VV S+ + + + + + Sbjct: 248 LVVLIASLRGLEAKGGPKGVANAVNASVVLSVFCIFMTNLVVSQI 292 >gi|169631108|ref|YP_001704757.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977] gi|169243075|emb|CAM64103.1| Putative YrbE family protein [Mycobacterium abscessus] Length = 292 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 55/265 (20%), Positives = 113/265 (42%), Gaps = 10/265 (3%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSY----KFKGFLLSLIRQM------YYVGV 165 + + F + A LG I+ G A+ +++ L+ M VG Sbjct: 19 RSVWNFTKGAGGSAEYLGHQITFVGLVLAAIPQTLKRYRRQTGILLVDMTWGNGSIIVGG 78 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 + V++ + GA + G L G + + + + RE+ ++ A+ A ++G Sbjct: 79 GVIGVLVFMGIAVGASVGIVGFSTLDMVGMGSLTGFISAYVNTREMAPMIAAIGFAAQAG 138 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 + AEIG+M+I+EEIDA+ G+ + +++ R+ A II + L +L A + + Sbjct: 139 CRMTAEIGAMRISEEIDALEAQGIRSIPFVVTTRVIAGIIIIVPLYVLTLLLAYGSCAFM 198 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 ++ ++ V+ F S ++ +IKA I + +G+ G +G Sbjct: 199 VFFVHNQSQGVYKHYFDSFVHPVDVLYSVIKAVVFVVIIIAIQCYQGYYAGGGPEGVGMA 258 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 + S+ V++ D L + ++ Sbjct: 259 SGRAIRASLVAVVLFDMLLTLLFWG 283 >gi|118466445|ref|YP_880208.1| TrnB2 protein [Mycobacterium avium 104] gi|118167732|gb|ABK68629.1| TrnB2 protein [Mycobacterium avium 104] Length = 281 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 100/245 (40%), Gaps = 7/245 (2%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV-----SGVPV 170 ++ V + A G ++ G A++ + + + G V + Sbjct: 15 ERPVALLAGIGDHALFYGKALA--GMPFAATRYTREVVRLVAEISMGAGTLAMIGGTVVI 72 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 V ++ G +A QG L G E + L + + +R ++ + +A G+ + A Sbjct: 73 VGFLTLAAGGTLAIQGYTSLGNIGIEALTGFLAAFINVRIAAPVVAGIGLAATFGAGVTA 132 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 ++G+M+INEE+DA+ +M + V L+S RI A ++++ L +A + + + Sbjct: 133 QLGAMRINEEVDALESMAIRPVAYLVSTRILAGMLAITPLYSIAVILSFVASQFTTTFLL 192 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 ++ F++ ++ ++A MA I ++ G+ +G V Sbjct: 193 GQSQGLYQHYFNTFLNPIDLLWSFLQAILMALTILLIHTYYGYFASGGPAGVGNATGNAV 252 Query: 351 VQSIS 355 S+ Sbjct: 253 RTSLI 257 >gi|284042176|ref|YP_003392516.1| hypothetical protein Cwoe_0708 [Conexibacter woesei DSM 14684] gi|283946397|gb|ADB49141.1| protein of unknown function DUF140 [Conexibacter woesei DSM 14684] Length = 272 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 57/243 (23%), Positives = 116/243 (47%), Gaps = 3/243 (1%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFK-GFLLSLIRQMYYVGVSG-VPVVILISFVTGAVI 182 +G ++ TG+ S+ + + + Q + +P+++ ++ ++ +V Sbjct: 17 LRDALEEVGDMLILTGKTLVSAIRPPYPYGDEFVSQFMFALRQCFLPLILTMACISYSVP 76 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 Q A L FGA L + +RE ++ A+++AG +G+AI A++G+ KI EE+D Sbjct: 77 GLQAANFLMLFGALDRMGGLFVLAVIREFAPIVCAIVVAGAAGTAITADLGARKIREELD 136 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++ +G+D V+ L+ PR ALI L + A I G + D FF+ F Sbjct: 137 ALQVLGVDPVKNLVVPRFLALIAITALFDVFAIVFGITGG-LAATLLNDARIEPFFATFW 195 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 ++++ +++ L+K IV +G V + +G+ V +V + + +++ Sbjct: 196 TSSSTTDLWGSLLKCTIFGGVTAIVCCYKGMTVSGGAAGVGRAVNQAIVIAFLAIGVVNY 255 Query: 363 LFA 365 +F Sbjct: 256 VFT 258 >gi|254773836|ref|ZP_05215352.1| TrnB2 protein [Mycobacterium avium subsp. avium ATCC 25291] Length = 281 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 97/241 (40%), Gaps = 7/241 (2%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV-----SGVPVVILI 174 + A G ++ G A++ + + + G V +V + Sbjct: 19 ALLAGIGDHALFYGKALA--GMPFAATRYTREVVRLVAEISMGAGTLAMIGGTVVIVGFL 76 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 + G +A QG L G E + L + + +R ++ + +A G+ + A++G+ Sbjct: 77 TLAAGGTLAIQGYTSLGNIGIEALTGFLAAFINVRIAAPVVAGIGLAATFGAGVTAQLGA 136 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 M+INEE+DA+ +M + V L+S RI A ++++ L +A + + + Sbjct: 137 MRINEEVDALESMAIRPVAYLVSTRILAGMLAITPLYSIAVILSFVASQFTTTFLLGQSQ 196 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 ++ F++ ++ ++A MA I ++ G+ +G V S+ Sbjct: 197 GLYQHYFNTFLNPIDLLWSFLQAILMALTILLIHTYYGYFASGGPAGVGNATGNAVRTSL 256 Query: 355 S 355 Sbjct: 257 I 257 >gi|189425024|ref|YP_001952201.1| hypothetical protein Glov_1965 [Geobacter lovleyi SZ] gi|189421283|gb|ACD95681.1| protein of unknown function DUF140 [Geobacter lovleyi SZ] Length = 270 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 59/258 (22%), Positives = 120/258 (46%), Gaps = 3/258 (1%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 IG +++ + ++ + + S + L++Q+Y+ G+ Sbjct: 9 FPERIGAFVLRRGQFFVTITRLILQSLVSLIS--PPSLGNPAIRMVLLKQLYFTGLEAAK 66 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +++L++ + G VI Q L G ++ + E+G LLTA+++ RSG+AI Sbjct: 67 IIVLVAVILGTVIVSQV-IGLVGGGNGSLIGKVLVWVVFLELGPLLTAMIVIARSGTAIA 125 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AE+G+MKIN EI A+ +G+D R L+ PR+ S+ LLTI ++ +G +++ Sbjct: 126 AELGAMKINGEIAALERLGIDPERYLLLPRVIGAATSVMLLTIYFVLTSFVGGFLIVSFG 185 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 + I + F ++ + + + KA I ++ G +VG + + + T Sbjct: 186 HHISYDQFIQGIVASLGIREVVVLMAKAAAFGLIIPLICCNAGMSVGTSATEIPQAATRA 245 Query: 350 VVQSISIVIIIDSLFAIF 367 V+ S+ + ++D + Sbjct: 246 VITSLFSIFVLDGVITYL 263 >gi|296394454|ref|YP_003659338.1| hypothetical protein Srot_2051 [Segniliparus rotundus DSM 44985] gi|296181601|gb|ADG98507.1| protein of unknown function DUF140 [Segniliparus rotundus DSM 44985] Length = 280 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 115/269 (42%), Gaps = 3/269 (1%) Query: 99 QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158 Q++ + + ++ ++ + L S + L IR Sbjct: 5 QQAGRPSIVERFVSYLFDTVLTSLRTLG---RWFMLAADAFRYLVVDSVMLRYPLRETIR 61 Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 Q +++ +L+S G ++ Q Q GA + + +R+ ++ A+ Sbjct: 62 QCWFITSVTALPSLLVSIPFGVIVMVQVGNITQQVGAASLTGAAGGLAVIRQGAPIVAAL 121 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++ G +GSAI A++G+ I EEIDA+R +G++ + L++PR+ A+++ PLL + F Sbjct: 122 LLGGAAGSAIAADLGARTIREEIDAMRVIGINPTQRLVAPRLAAMLLVAPLLCLFIVFIT 181 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 + I+ Y D+ + + A L++++ + KA F + ++A + G Sbjct: 182 MAAGYILAVMYQDVTPGSYLGSLGAFAKLSDVYVAVGKALFFGVVVVVIACQRGLETKFG 241 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + + V VV + +++ + Sbjct: 242 PRGVAESVNAAVVLGVLSTFVLNVVATQI 270 >gi|315443551|ref|YP_004076430.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|315261854|gb|ADT98595.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 285 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 107/252 (42%), Gaps = 10/252 (3%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY-- 162 + F L ++G+ + + G ++ F+ ++ LI ++ Sbjct: 9 SRFPRLVDNLGRPV-AVLGRLGDHVLFYGRAVAGVPHAAVH---FRKEIIRLIAEISMGA 64 Query: 163 ----VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 + V +V ++ G +A QG L G E + L + + +R ++ + Sbjct: 65 GTLAMIGGTVVIVGFLTLAAGGTLAIQGYSSLGDIGIEALTGFLAAFINVRIAAPVVAGI 124 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 +A G+ + A++G+M+INEEIDA+ +MG+ V L+S RI A ++++ L +A + Sbjct: 125 GLAATFGAGVTAQLGAMRINEEIDALESMGIRPVEYLVSTRIVAGMVAITPLYSIAVILS 184 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 I + + ++ F + ++ ++A MA AI +V G+ Sbjct: 185 FIASQFTTVVLFGQSGGLYDHYFDTFLNPIDLLWSFLQAVLMAIAILLVHTYFGYFASGG 244 Query: 339 SNSLGKKVTTCV 350 + +G V V Sbjct: 245 PSGVGAAVGNAV 256 >gi|158520050|ref|YP_001527920.1| hypothetical protein Dole_0033 [Desulfococcus oleovorans Hxd3] gi|158508876|gb|ABW65843.1| protein of unknown function DUF140 [Desulfococcus oleovorans Hxd3] Length = 258 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 68/258 (26%), Positives = 127/258 (49%), Gaps = 8/258 (3%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLL-SLIRQMYYVGVSGVPVV 171 +IG+K + +++ + A I AS K + + ++ Q+Y+ V + ++ Sbjct: 7 YIGRKTLAYVDHLQNMAAF---AIDLCAVLLASPLKGRAVVRWGVVEQIYFTAVQALFLI 63 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 I +S +TG+++ Q ++F ++ LM IL +REIG ++TA+++ RS +A+ E Sbjct: 64 IPLSLLTGSMMLIQ----FAKFSGQVDLGKLMIILVIREIGPVVTAMLVVLRSATAVTIE 119 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 IG M + EID++ G+D +R+L PR + ++ L I+ + AI+G V+ Sbjct: 120 IGYMNVFNEIDSLEMTGIDPLRLLAIPRFVGITSAIVCLFIVFDLVAILGGYGVVRLTTS 179 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 IP F S S T A+I GL+KA I +V + GF + K +T + Sbjct: 180 IPVGNFLSDIGSAITGADIIVGLVKALCFGVVISVVTLYHGFEAQKRITVIPKITSTAAI 239 Query: 352 QSISIVIIIDSLFAIFYF 369 + I+ + + ++ Sbjct: 240 ECFFYCIVTNIFISGLFY 257 >gi|226306857|ref|YP_002766817.1| YrbE family protein [Rhodococcus erythropolis PR4] gi|229492717|ref|ZP_04386518.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] gi|226185974|dbj|BAH34078.1| putative YrbE family protein [Rhodococcus erythropolis PR4] gi|229320376|gb|EEN86196.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] Length = 290 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 108/263 (41%), Gaps = 15/263 (5%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG--------- 167 + + I+D QA I++ + + ++R + + + Sbjct: 25 RTSRSIDDVGRQAVFFARAIAHI------PWAIRKHPKEVLRLVAEISMGTGALAVIGGT 78 Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V VV ++ +G IA QG L G E + + + +R ++ + ++ G+ Sbjct: 79 VAVVGFLTLASGGTIAIQGFSSLGNIGVEALTGFFSAFINVRIAAPVIAGIGLSATIGAG 138 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 A+IG+M+I+EEIDA+ +M + V ++S R+ A +I++ L LA + + Sbjct: 139 STAQIGAMRISEEIDALESMAISSVPYVVSTRVTAGMIAILPLYSLALVGSFLAGRFTTV 198 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + ++ F + ++ ++ MA + ++ G+ + +G V Sbjct: 199 VLFGQSSGLYDHYFTTFLDPVDVAWSFVQVLVMALLVMLIHTYYGYNASGGPSGVGTAVG 258 Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370 V S+ V+ + L ++ + Sbjct: 259 RGVRLSLICVVAVTLLVSLALYG 281 >gi|289645181|ref|ZP_06477196.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] gi|289505006|gb|EFD26089.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] Length = 286 Score = 156 bits (396), Expect = 4e-36, Method: Composition-based stats. Identities = 60/273 (21%), Positives = 118/273 (43%), Gaps = 6/273 (2%) Query: 99 QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158 RS +++ + + + + D +LG +++ + + +G+ S Sbjct: 12 HRSGSGTITESVLTRLPPLLQRVVVDVGQCGQLLGRLVTT------AVRQPRGYWGSTRD 65 Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 +MY + +L +IA LS G + + +REI T + Sbjct: 66 EMYAMLRFCWLPCVLAVGGFTFLIANYAYDLLSLLGGQNRIGTYFVMASIREISPFCTGM 125 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 +AG G+A+ A++G+ +I EE+DA++ +G+D R+L+ PR+ A+ I TI+ Sbjct: 126 AVAGVMGTAMAADLGARRIREELDALKVLGVDSTRMLVLPRVLAITIMTVAFTIIGGLLG 185 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 II A + +F+ F S+ T + ++K+ IG+V ++G V Sbjct: 186 IIMAMTSATVFGTTSVGGYFANFLSSLTTPELVGVVVKSTLTGTFIGVVCAQKGLTVRGG 245 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 S +G+ V VV + V +I+ + + Sbjct: 246 SEGVGRAVNEAVVLCFAAVWVINFVLNATMLGL 278 >gi|296138973|ref|YP_003646216.1| hypothetical protein Tpau_1246 [Tsukamurella paurometabola DSM 20162] gi|296027107|gb|ADG77877.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM 20162] Length = 285 Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats. Identities = 56/248 (22%), Positives = 106/248 (42%), Gaps = 2/248 (0%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ-MYYVGVSGVPVVILISFVTG 179 ++ + + +++ + + + Q Y +GV+ P + LI+ G Sbjct: 29 VVDSIRTMGRAVRMLVLTLVSMVTDIVRGQLQWKETLYQTWYMIGVTAFPGI-LIAIPFG 87 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 VI+ Q + Q GA+ S + + + + T +++AG SAI A++G+ I E Sbjct: 88 IVISIQVGNIIHQLGADSLSGAAGGLAVIAQGAPIATGLLLAGAGASAIAADLGARTIRE 147 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E DA+R MG++ + L+ PR+ A I PLL +L I +V + ++ Sbjct: 148 ETDAMRVMGINPINRLVVPRLLAAWIVSPLLNLLIIGVGTIAGYLVAVGGQGVTPGAYWL 207 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 F S A +++ L+K+ I I+ + G S + V VV S ++ Sbjct: 208 SFGSFAHPIDVWISLVKSIIFGTIIAIIGCQRGLEAKGGSRGVADGVNATVVLSFVVIFA 267 Query: 360 IDSLFAIF 367 ++ L Sbjct: 268 VNLLITQI 275 >gi|319952306|ref|YP_004163573.1| hypothetical protein Celal_0740 [Cellulophaga algicola DSM 14237] gi|319420966|gb|ADV48075.1| protein of unknown function DUF140 [Cellulophaga algicola DSM 14237] Length = 245 Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats. Identities = 53/246 (21%), Positives = 102/246 (41%), Gaps = 2/246 (0%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + +G E K++ +++++ + + ++I ISF G V+A Q Sbjct: 1 MNYLASIGSYFIMIREVFKKPTKWRIMKSLILKEIDELIYGSLGIIIFISFFIGGVVAIQ 60 Query: 186 GAFQLSQFGAE-IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 A ++ + E T++++AG+ GS I + IG+M++ E+IDA+ Sbjct: 61 TALNMTNPLIPRNLIGFATRQSVILEFAPTFTSIIMAGKVGSYITSSIGTMRVTEQIDAL 120 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG++ + L+ P+I AL++ P +A + I G I A F Sbjct: 121 EVMGVNSLNYLVFPKIVALLL-YPFAIAIAMYVGIFGGWIAGVFGGFSTSADFVEGIQLD 179 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++ IK A I + GF + + +GK TT V + ++II++ + Sbjct: 180 FIPFHVTYSFIKTIIFAFIIATIPSFHGFYMKGGALEVGKASTTSFVWTSVVIIIVNYVL 239 Query: 365 AIFYFA 370 Sbjct: 240 TQLLLG 245 >gi|145223094|ref|YP_001133772.1| hypothetical protein Mflv_2507 [Mycobacterium gilvum PYR-GCK] gi|145215580|gb|ABP44984.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] Length = 285 Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 105/248 (42%), Gaps = 10/248 (4%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------ 162 L ++G+ + + G ++ F+ ++ LI ++ Sbjct: 13 RLVGNLGRPV-AVLGRLGDHVLFYGRAVAGVPHAAVH---FRKEIIRLIAEISMGAGTLA 68 Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 + V +V ++ G +A QG L G E + L + + +R ++ + +A Sbjct: 69 MIGGTVVIVGFLTLAAGGTLAIQGYSSLGDIGIEALTGFLAAFINVRIAAPVVAGIGLAA 128 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 G+ + A++G+M+INEEIDA+ +MG+ V L+S RI A ++++ L +A + I + Sbjct: 129 TFGAGVTAQLGAMRINEEIDALESMGIRPVEYLVSTRIVAGMVAITPLYSIAVILSFIAS 188 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 + ++ F + ++ ++A MA AI +V G+ + + Sbjct: 189 QFTTVVLFGQSGGLYDHYFDTFLNPIDLLWSFLQAVLMAIAILLVHTYFGYFASGGPSGV 248 Query: 343 GKKVTTCV 350 G V V Sbjct: 249 GAAVGNAV 256 >gi|311741975|ref|ZP_07715785.1| ABC superfamily ATP binding cassette transporter membrane protein [Aeromicrobium marinum DSM 15272] gi|311314468|gb|EFQ84375.1| ABC superfamily ATP binding cassette transporter membrane protein [Aeromicrobium marinum DSM 15272] Length = 283 Score = 156 bits (394), Expect = 6e-36, Method: Composition-based stats. Identities = 46/257 (17%), Positives = 96/257 (37%), Gaps = 8/257 (3%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ-------MYYVGVSGVPVVILI 174 I L + K+ + LI + M +G V VV + Sbjct: 21 IRSVGDLGTQLMFYARAIAWIPLTIRKYPKEIRRLIAEVSMGSGAMAAIG-GTVFVVFFL 79 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 S G + + G S + RE ++ + + G+ A++G+ Sbjct: 80 SLAIGIQVGLEAFTTFGNIGVGALSGFFSAYFNTREAAPIMACIALTATVGAGFTAQLGA 139 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 M+++EEIDA+ M + + L++ RI A ++++ L + + + +++ + Sbjct: 140 MRVSEEIDALDVMAVPSIPYLVTTRIVAGMVAVVPLFAIGLITMFLATQVMVTVAFGQAT 199 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 + F + ++ +K A I V G+ +G+ V V S+ Sbjct: 200 GTYQHYFDTFLVPGDVALAGVKVLLTAVVIMCVCCYYGYTASGGPAGVGRSVGRAVRTSL 259 Query: 355 SIVIIIDSLFAIFYFAI 371 V+ ID +F I ++ + Sbjct: 260 ITVMSIDLVFGIAFWGV 276 >gi|296165591|ref|ZP_06848116.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899064|gb|EFG78545.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 230 Score = 156 bits (394), Expect = 7e-36, Method: Composition-based stats. Identities = 46/203 (22%), Positives = 92/203 (45%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 + ++ ++ GA++A + L+ G S + +RE+ L+T V A ++G Sbjct: 19 ISILTILGVTIGAMVAIEAYATLNLIGLGALSGIIGGWGNIREMAPLVTGVAFASQAGCR 78 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + AEIGSM+I +EIDA +MGL + ++ R+ +I + +L A + +VI Sbjct: 79 MTAEIGSMRIADEIDATESMGLRSIPFVVGTRLVGGMICVVPGFLLELMVAFFTSDLVIR 138 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 Y+ P + F + +I LIKA A ++ G+ +G+ Sbjct: 139 VSYNQPAGTYNHYFVQFLSPTDIGYSLIKAIIYCAAATLIHCYYGYFASGGPVGVGQASG 198 Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370 + S+ ++++D + + + Sbjct: 199 RAIRASLVTIMVLDIMTTVMIWG 221 >gi|41406661|ref|NP_959497.1| hypothetical protein MAP0563 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395010|gb|AAS02880.1| hypothetical protein MAP_0563 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 280 Score = 156 bits (394), Expect = 7e-36, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 116/262 (44%), Gaps = 11/262 (4%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV-------P 169 ++ + ++D QA G + +++ + LI +M +G + Sbjct: 15 RLQEPVDDFGEQALFYGQTMRYVPNALT---RYRKETIRLIAEM-TMGAGALVMIGGTVG 70 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V ++ +G VIA QG L G E + L + L +R + ++ + +A G+ Sbjct: 71 VAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGAT 130 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A++G+M+++EEIDA+ M + V L+S R+ A +I++ L L+ +A A Sbjct: 131 AQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLIAIVPLYSLSVLAAFFAARFTTVYI 190 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 ++ F++ +++ ++A M+ A+ +V G+ +G V Sbjct: 191 NGQSKGLYDHYFNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNAHGGPVGVGIAVGQA 250 Query: 350 VVQSISIVIIIDSLFAIFYFAI 371 V S+ +V++I ++ + + Sbjct: 251 VRTSLIVVVVITLFISLAVYGV 272 >gi|315442435|ref|YP_004075314.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|315260738|gb|ADT97479.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 284 Score = 156 bits (394), Expect = 7e-36, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 105/250 (42%), Gaps = 6/250 (2%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVILISFVTGAV 181 H+L + + ++ + L+ + + VG V I++ GA+ Sbjct: 27 LGHMLVFFVRALVAIPLALRHYRAEFVRLLSDIAWGNGSLVVGGGTAGVAIVLGITVGAL 86 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 + +G L G + + S++ RE+ + ++ A ++G A++GSM+I EEI Sbjct: 87 VGIEGYNFLDLLGLGPATGIISSLVNTRELAPIALSLAFATQAGCRFTAQLGSMRIAEEI 146 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ ++ + + L++ R+ A ++++ L ++ + + IV+ + F Sbjct: 147 DALDSIAIRPIPYLVTTRLMASVVAVVPLYVVCLAVSYLTTQIVVRAISGGATGSYMHYF 206 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + +I L+KA + GF +G + SI++VII++ Sbjct: 207 TLMLSGQDILYSLLKAIIFVWIATTIQCYYGFYASGGPEGVGVAAGHAMRASITVVIIVN 266 Query: 362 SLFAIFYFAI 371 L + + I Sbjct: 267 MLLTMALWNI 276 >gi|183984679|ref|YP_001852970.1| hypothetical protein MMAR_4711 [Mycobacterium marinum M] gi|183178005|gb|ACC43115.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length = 281 Score = 155 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 99/242 (40%), Gaps = 7/242 (2%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV-----SGVPVVIL 173 V ++ G I+ G A+++ + + + G + +V Sbjct: 18 VGTLSRIGDHTLFYGKAIA--GAPFAATHYRREIIRLVAEISMGAGTLAMIGGTLVIVGF 75 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 ++ G +A QG L G E + L + + +R ++ + +A G+ + A++G Sbjct: 76 LTLAAGGTLAVQGYSSLGNIGIEALTGFLAAFINVRIAAPIVAGIGLAATFGAGVTAQLG 135 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 +M+INEEIDA+ +M + V L+S RI A ++++ L +A + + + + Sbjct: 136 AMRINEEIDALESMAIRPVSYLVSTRIVAGMMAITPLYSIAVILSFLASQFTTVILFGQS 195 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 ++ F + ++ ++A MA I ++ G+ +G V S Sbjct: 196 GGLYQHYFTTFLNPIDLLWSFLQAVLMAITILLIHTYFGYFASGGPAGVGVATGNAVRTS 255 Query: 354 IS 355 + Sbjct: 256 LI 257 >gi|118618294|ref|YP_906626.1| integral membrane protein YrbE3A [Mycobacterium ulcerans Agy99] gi|118570404|gb|ABL05155.1| conserved hypothetical integral membrane protein YrbE3A [Mycobacterium ulcerans Agy99] Length = 277 Score = 155 bits (393), Expect = 8e-36, Method: Composition-based stats. Identities = 49/236 (20%), Positives = 105/236 (44%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + T + S ++ + Q ++V +L++ + L+ Sbjct: 35 LGDFFAMTLDTFVSMFRPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLFNVLLT 94 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 GA FS +I + + ++T +++AG +A+ A++G+ I EE+DA+R MG++ Sbjct: 95 DIGAADFSGTGCAIFTVDQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVMGINP 154 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 ++ L+ PR+ P L+ L + +IGA + + + + + ++ Sbjct: 155 IQALVVPRVLGATTVSPALSSLVIATGLIGAFLCSVFLMHVSAGAWVTGLTTLTHTVDVV 214 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 +IKA G++A +G +VG +G+ V VV + ++ +I+ + Sbjct: 215 ISMIKATLFGLMAGLIACYKGISVGGGPAGVGRAVNETVVFAFVVLFVINIVVTAV 270 >gi|120405353|ref|YP_955182.1| hypothetical protein Mvan_4400 [Mycobacterium vanbaalenii PYR-1] gi|119958171|gb|ABM15176.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 281 Score = 155 bits (393), Expect = 8e-36, Method: Composition-based stats. Identities = 63/258 (24%), Positives = 114/258 (44%), Gaps = 11/258 (4%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP-------VVI 172 ++ Q G + +TG+ ++ +L I QM + GV + +V Sbjct: 19 AGLDRLGLQTLFYGHTLRSTGDAAIH---YRAEILRQIAQMGF-GVGALAAIGGTVVIVS 74 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 ++ GA++A G QLSQ G E + + + +R IG L+ + +A G+ A++ Sbjct: 75 FLTVSVGALVAVIGFNQLSQVGVEALTGFISAFFNVRLIGPLIAGIALAATIGAGTTAQL 134 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 G+M+INEEIDA+ MG+ V L S R+ A + + L +A SA + A + +Y Sbjct: 135 GAMRINEEIDALEVMGVRSVSYLASTRLIAGTLVVVPLYCVALISAFVAAKVGTTVFYGQ 194 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 V+ F++ ++ + A MA I +V GF +G+ V V Sbjct: 195 SVGVYEHYFYTFLNPDSVVWSFLLAVTMAVVIMLVHTYYGFNAAGGPAGVGQAVGQSVRA 254 Query: 353 SISIVIIIDSLFAIFYFA 370 S+ ++ ++ + Sbjct: 255 SLVAATVMTMFVSLALYG 272 >gi|254820119|ref|ZP_05225120.1| hypothetical protein MintA_09341 [Mycobacterium intracellulare ATCC 13950] Length = 256 Score = 155 bits (393), Expect = 8e-36, Method: Composition-based stats. Identities = 53/247 (21%), Positives = 104/247 (42%), Gaps = 4/247 (1%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 F S L + + + + FLL Q ++V + +++S Sbjct: 8 FAKPVRSVGDFFALALDTLLQIPRRPFAGREFLL----QSWFVARVSIAPTMMLSIPFTV 63 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 + L +FGA FS ++ + +IG L+T +++AG +A+ A++G+ I EE Sbjct: 64 LTVFTINILLIEFGAGDFSGSGAALATVTQIGPLVTVLVVAGAGATAMCADLGARTIREE 123 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +DA+R +G++ + L+ PR+ A LL+ + + ++G + F + Sbjct: 124 LDALRVLGINPIGSLVVPRVLAATFVSLLLSGVVIVTGLVGGFEFSVFVQHVTPGSFAAG 183 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + L+KA ++A +G +VG + ++G V VV S + I Sbjct: 184 LTLLTGARELVIALVKAGLFGLTASLIACYKGISVGRGAAAVGNAVNETVVFSFMSLFFI 243 Query: 361 DSLFAIF 367 D + Sbjct: 244 DVVVTAV 250 >gi|120401936|ref|YP_951765.1| hypothetical protein Mvan_0921 [Mycobacterium vanbaalenii PYR-1] gi|119954754|gb|ABM11759.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 284 Score = 155 bits (393), Expect = 9e-36, Method: Composition-based stats. Identities = 58/256 (22%), Positives = 110/256 (42%), Gaps = 9/256 (3%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPV 170 + N +Q G + + G+ ++ + I QM V + + Sbjct: 19 GLAAGWNRIGTQTEFYGRTVRSIGDAVVH---YRTEIAVQIAQMSLGTGALAVVGGTIVI 75 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 V ++ GA+IA QG L+ G E + + L +R IG L T + +A G+ A Sbjct: 76 VGFLTMSAGALIAVQGYNTLAGVGVEALTGFASAYLNVRIIGPLTTGIGLAATIGAGATA 135 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 ++G+M+I EEIDA+ MG+ + L S R+ A +I + L +A + + A + Y Sbjct: 136 QLGAMRIAEEIDALEVMGVRSIAYLASTRLLAGMIVVIPLYCVAVLMSFVAARVGTTAIY 195 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 V+ F + ++ ++A MA + ++ GF +G+ V V Sbjct: 196 GQSTGVYDHYFTTFLNPLDLVWSFVQAIAMAVTVMVIHTYYGFNASGGPAGVGEAVGRAV 255 Query: 351 VQSISIVIIIDSLFAI 366 S+ +V+ + + ++ Sbjct: 256 RASLIVVVFVTLVISL 271 >gi|118619947|ref|YP_908279.1| integral membrane protein YrbE6A [Mycobacterium ulcerans Agy99] gi|118572057|gb|ABL06808.1| conserved hypothetical integral membrane protein YrbE6A [Mycobacterium ulcerans Agy99] Length = 281 Score = 155 bits (393), Expect = 9e-36, Method: Composition-based stats. Identities = 51/236 (21%), Positives = 105/236 (44%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 ++ + IRQ ++ + + IL++ GA ++ Q A Q GA Sbjct: 40 VAALRYLAIDLVTGRFPWTECIRQASFMAATAIMPTILVALPIGATLSIQFAMLAGQVGA 99 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 + + +R+ L+ A+++A GSAI A++G + EE DA+ MG+ VR L Sbjct: 100 TSLAGAASGLTVVRQAASLVAAILLAAAVGSAITADLGVRTMREETDAMEMMGVSVVRNL 159 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PR+ A ++ L + F + + + F + F + AT ++ L+ Sbjct: 160 VVPRLLAAMVIGVALCGVVCFVGFLASYLFNVYVQGGSAGSFLATFSAFATTGDMILALL 219 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 KA + +VA ++G + + V VV+++ +++I++ + + Y + Sbjct: 220 KAAVYGFIVTVVACQKGLSTRGGPAGVANSVNAAVVEAVLLLMIVNVVVSELYTVL 275 >gi|284043171|ref|YP_003393511.1| hypothetical protein Cwoe_1709 [Conexibacter woesei DSM 14684] gi|283947392|gb|ADB50136.1| protein of unknown function DUF140 [Conexibacter woesei DSM 14684] Length = 264 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 57/248 (22%), Positives = 105/248 (42%), Gaps = 3/248 (1%) Query: 126 CSQAHILGLVISNTGEFCASSYKFK--GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 G ++ T Y + F +RQ + +S V+ + F+ G Sbjct: 8 RGWVESFGDIVRFTMRMFGEVYGGRVFRFFGEALRQAGLLILSSTLVIWGLVFIIGLQCG 67 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 +GA+ G ++ + LRE+ M+A + G+ IVAEIGSM+I EEIDA Sbjct: 68 IEGAYFTRGTGTPNYAGVFTAWCDLRELVPYAFGYMMAAKVGTGIVAEIGSMRITEEIDA 127 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI-VIWKYYDIPFAVFFSRFH 302 + MG+ + L R+ A + LP + I +A I + + V+ + +++ + F Sbjct: 128 LEVMGISSMTFLCGTRLLASWMVLPFVYIGGVGAAFIASYLAVVVQIHEVSAGGYELIFW 187 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + ++ L+K FMA I +V G+ +G +V ++ V +I Sbjct: 188 AFQNPTDLLYSLLKGAFMATGIVVVGCYYGYNASGGPVGVGTATAKSMVVNLVYVHLIGM 247 Query: 363 LFAIFYFA 370 + ++ Sbjct: 248 MGTQLFWG 255 >gi|311743966|ref|ZP_07717772.1| ABC superfamily ATP binding cassette transporter, membrane protein [Aeromicrobium marinum DSM 15272] gi|311313096|gb|EFQ83007.1| ABC superfamily ATP binding cassette transporter, membrane protein [Aeromicrobium marinum DSM 15272] Length = 275 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 114/260 (43%), Gaps = 10/260 (3%) Query: 121 FINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVSG---------VPV 170 + S ++G ++ G S + + + R + + V V Sbjct: 7 LLERPTSMLALVGTQMTFAGRAIGSIPMTLRHYRAEVFRILLDISWGTGALLVGGGTVGV 66 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 ++L++ G + +G L G + + +++ RE+ L+ A+ +A + G A Sbjct: 67 MVLLAVSAGTSLGIEGFNGLETIGLAPLTGFISAVVNTRELAPLVAALALAAQVGCRFTA 126 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 ++GSM+ +EEIDA+ M + + L++ R+ A ++++ L ++ + + + + + + Sbjct: 127 QLGSMRTSEEIDALSVMAVPAIPYLVTTRLIASMLAILPLYMIGLVGSYLASQLAVTVLF 186 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 P + F + L +I ++K A A+ ++ GF + +G+ + Sbjct: 187 GQPVGTYQHYFGTFIALEDIALSIVKVLVFAFAVTLIHCWYGFMASGGAEGVGEATGRAI 246 Query: 351 VQSISIVIIIDSLFAIFYFA 370 SI +V++++ + + ++ Sbjct: 247 RASIVVVVLLNMILTLVFWG 266 >gi|239787370|emb|CAX83846.1| ABC transporter permease protein [uncultured bacterium] Length = 168 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 61/163 (37%), Positives = 101/163 (61%) Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 M++ +RE L+T +++AGRSGSA+ A +G+M+IN+EIDA+ MG+D VR L++P + A Sbjct: 1 MALSVVREFAPLITGIVVAGRSGSALAARLGTMRINQEIDALHVMGIDPVRFLVAPALLA 60 Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322 +++ LPLLT+LA+F A+ GA + I + F ++ R + ++ GL K+ A Sbjct: 61 MLVVLPLLTLLADFVALTGAGMYICMDLGMDFPAYWERVIEALKVDDLGHGLGKSVIFAV 120 Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + +V + G V + +GK T VV +IS +++ D LFA Sbjct: 121 LVTLVGVVNGSLVQGGAEGVGKATTRSVVHAISAIVVTDMLFA 163 >gi|118463834|ref|YP_879936.1| ABC transporter transmembrane protein [Mycobacterium avium 104] gi|254773612|ref|ZP_05215128.1| ABC-transporter integral membrane protein [Mycobacterium avium subsp. avium ATCC 25291] gi|118165121|gb|ABK66018.1| ABC-transporter integral membrane protein [Mycobacterium avium 104] Length = 280 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 115/261 (44%), Gaps = 11/261 (4%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV-------P 169 ++ + ++D QA G + +++ + LI +M +G + Sbjct: 15 RLQEPVDDFGEQALFYGQTMRYVPNALT---RYRKETIRLIAEM-TMGAGALVMIGGTVG 70 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V ++ +G VIA QG L G E + L + L +R + ++ + +A G+ Sbjct: 71 VAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGAT 130 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A++G+M+++EEIDA+ M + V L+S R+ A +I++ L L+ +A A Sbjct: 131 AQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLIAIVPLYSLSVLAAFFAARFTTVYI 190 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 ++ F++ +++ ++A M+ A+ +V G+ +G V Sbjct: 191 NGQSKGLYDHYFNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNAHGGPVGVGIAVGQA 250 Query: 350 VVQSISIVIIIDSLFAIFYFA 370 V S+ +V++I ++ + Sbjct: 251 VRTSLIVVVVITLFISLAVYG 271 >gi|118616794|ref|YP_905126.1| integral membrane protein YrbE1B [Mycobacterium ulcerans Agy99] gi|118568904|gb|ABL03655.1| conserved hypothetical integral membrane protein YrbE1B [Mycobacterium ulcerans Agy99] Length = 289 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 60/257 (23%), Positives = 115/257 (44%), Gaps = 12/257 (4%) Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 R+ F + N + + G + + +++S A ++++ G+ + ++ +L LI Q Sbjct: 8 RARFPRAIANFNRYAG-SVTRGLDESGRLAWF---ILTSLGQSGHALRYYRKEILRLIAQ 63 Query: 160 MYYVGVSGVPVVILISFVTGAV-------IAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 + +G + VV + + G V IA QG L G E F+ +++ +R G Sbjct: 64 IG-MGTGAMAVVGGTAAIVGFVTLSGSSLIAIQGFASLGNIGVEAFTGFFSALVNVRIAG 122 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 ++T V +A G+ AE+G+M+I+EEIDA+ MG+ + L S RI A ++ + L Sbjct: 123 PVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIQSISYLASTRIMAGLVVIIPLYA 182 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 LA + +V Y + F + ++F ++A +A + + G Sbjct: 183 LAMIMSFFSPQMVTTVLYGQSSGTYEHYFRTFLRPDDVFWSFLEAIIIAAIVMVTHCYYG 242 Query: 333 FAVGVHSNSLGKKVTTC 349 + G G+ V Sbjct: 243 YNAGGGPVGEGEAVGRS 259 >gi|118619126|ref|YP_907458.1| integral membrane protein YrbE3B_1 [Mycobacterium ulcerans Agy99] gi|183984021|ref|YP_001852312.1| integral membrane protein YrbE3B_1 [Mycobacterium marinum M] gi|118571236|gb|ABL05987.1| conserved hypothetical integral membrane protein YrbE3B_1 [Mycobacterium ulcerans Agy99] gi|183177347|gb|ACC42457.1| conserved hypothetical integral membrane protein YrbE3B_1 [Mycobacterium marinum M] Length = 284 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 52/244 (21%), Positives = 100/244 (40%), Gaps = 9/244 (3%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVI 172 V N +Q G + + ++ L+ LI QM V V +V Sbjct: 21 VAGWNQIGTQTKFFGRTLRSIHYMLIH---YRVELIRLIAQMGLGAGALMVIGGTVAIVG 77 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 ++ TGA++A QG S+ G E + + +R I TA+ ++ G+ A++ Sbjct: 78 FLTVTTGALVAVQGYSDFSELGVEALTGFASAFFNVRLIAPATTAIALSATIGAGATAQL 137 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 G+M+IN+EIDA+ MG+ + L + R+ A ++ + L + ++ A Y Sbjct: 138 GAMRINDEIDALEVMGIRTIAFLAASRVVAGLLVVIPLYCVGVLASFWAARFGTTVLYSQ 197 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 V+ F + ++ ++ ++ I +V G+ +G+ V V Sbjct: 198 ATGVYDHYFRTFLNPTDLVWSFVQCIALSLVIMLVHTYYGYTARGGPAGVGEAVGRAVRT 257 Query: 353 SISI 356 S+ Sbjct: 258 SLIF 261 >gi|118619946|ref|YP_908278.1| integral membrane protein YrbE6B [Mycobacterium ulcerans Agy99] gi|118572056|gb|ABL06807.1| conserved hypothetical integral membrane protein YrbE6B [Mycobacterium ulcerans Agy99] Length = 288 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 103/254 (40%), Gaps = 8/254 (3%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS-------FV 177 H++ + + +++ + L+ + + G + V Sbjct: 28 LARFGHMIAFYLHTVLAIPVALRRYRREFMRLLSDITW-GNGSIVVGGGTVGVVLVLGIT 86 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 GA++A +G L+ G + + S++ RE+ ++ A+ A ++G +IG+M++ Sbjct: 87 AGALVAIEGYNFLNMMGIGPATGVVSSLVTTRELAPIMAALGFAVQAGCRFTTQIGAMRV 146 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EEIDA+ M + + L++ R+ A +++ L I + + +++ + Sbjct: 147 AEEIDALNAMAIRPIPYLVTTRLLASAVAIIPLYIACLTISYLSCQLMVTFTTHGSVGPY 206 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 F ++ +IKA +V GF +G + SI++V Sbjct: 207 LHYFTMLIDARDVGYSVIKAAVFVALASVVQCYYGFCAEGGPEGVGVAAGHAMRASITVV 266 Query: 358 IIIDSLFAIFYFAI 371 II++ + + +++ Sbjct: 267 IIVNMVLTMALWSV 280 >gi|183980209|ref|YP_001848500.1| integral membrane protein YrbE6A [Mycobacterium marinum M] gi|183173535|gb|ACC38645.1| conserved hypothetical integral membrane protein YrbE6A [Mycobacterium marinum M] Length = 281 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 51/236 (21%), Positives = 105/236 (44%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 ++ + IRQ ++ + + IL++ GA ++ Q A Q GA Sbjct: 40 VAALRYLAIDLVTGRFPWTECIRQASFMAATAIMPTILVALPIGATLSIQFAMLAGQVGA 99 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 + + +R+ L+ A+++A GSAI A++G + EE DA+ MG+ VR L Sbjct: 100 TSLAGAASGLTVVRQAASLVAAILLAAAVGSAITADLGVRTMREETDAMEVMGVSVVRNL 159 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PR+ A ++ L + F + + + F + F + AT ++ L+ Sbjct: 160 VVPRLLAAMVIGVALCGVVCFVGFLASYLFNVYVQGGSAGSFLATFSAFATTGDMILALL 219 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 KA + +VA ++G + + V VV+++ +++I++ + + Y + Sbjct: 220 KAAVYGFIVTVVACQKGLSTRGGPAGVANSVNAAVVEAVLLLMIVNVVVSELYTVL 275 >gi|118470997|ref|YP_890127.1| TrnB2 protein [Mycobacterium smegmatis str. MC2 155] gi|118172284|gb|ABK73180.1| TrnB2 protein [Mycobacterium smegmatis str. MC2 155] Length = 287 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 56/282 (19%), Positives = 121/282 (42%), Gaps = 12/282 (4%) Query: 96 QKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLS 155 +K ++ Y++ + + + K ++ QA G + +++ + Sbjct: 2 RKKEKPMSYDATLRF-RRLFRGVPKTVDTVGEQALFYGETMRYLPNAFT---RYRKETIR 57 Query: 156 LIRQMYYVGVSGV-------PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL 208 L+ +M +G + V ++ +G VIA QG L G E + L + L + Sbjct: 58 LVAEM-TMGAGALVMIGGTVGVAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNV 116 Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268 R + ++ + +A G+ A++G+M++ EEIDA+ +M + V L+S R+ A +I++ Sbjct: 117 RIVAPVIAGIALAATIGAGATAQLGAMRVAEEIDAVESMAVHAVSYLVSTRLLAGLIAIV 176 Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328 L L+ +A A ++ F++ +++ ++A MA A+ +V Sbjct: 177 PLYSLSVLAAFFAARFTTVFINGQSAGLYDHYFNTFLIPSDLLWSFLQAIVMAIAVMLVH 236 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+ +G V V S+ +V+ I ++ + Sbjct: 237 TYYGYNASGGPVGVGIAVGQAVRTSLIVVVTITLFISLAVYG 278 >gi|183980210|ref|YP_001848501.1| integral membrane protein YrbE6B [Mycobacterium marinum M] gi|183173536|gb|ACC38646.1| conserved hypothetical integral membrane protein YrbE6B [Mycobacterium marinum M] Length = 288 Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 102/254 (40%), Gaps = 8/254 (3%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS-------FV 177 H++ + + +++ + L+ + + G + V Sbjct: 28 LARFGHMIAFYLHTVLAIPVALRRYRREFMRLLSDITW-GNGSIVVGGGTVGVVLVLGIT 86 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 GA++A +G L+ G + S++ RE+ ++ A+ A ++G +IG+M++ Sbjct: 87 AGALVAIEGYNFLNMMGIGPAIGVVSSLVTTRELAPIMAALGFAVQAGCRFTTQIGAMRV 146 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EEIDA+ M + + L++ R+ A +++ L I + + +++ + Sbjct: 147 AEEIDALNAMAIRPIPYLVTTRLLASAVAIIPLYIACLTISYLSCQLMVTFTTHGSVGPY 206 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 F ++ +IKA +V GF +G + SI++V Sbjct: 207 LHYFTMLIDARDVGYSVIKAVVFVALASVVQCYYGFCAEGGPEGVGVAAGHAMRASITVV 266 Query: 358 IIIDSLFAIFYFAI 371 II++ + + +++ Sbjct: 267 IIVNMVLTMALWSV 280 >gi|240170398|ref|ZP_04749057.1| hypothetical protein MkanA1_13890 [Mycobacterium kansasii ATCC 12478] Length = 281 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 93/225 (41%), Gaps = 9/225 (4%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---------VPVVILISFVTGAVIAQQ 185 + + + + ++R + + + + +V ++ G +A Q Sbjct: 28 TLFYGKALAGAPFAATHYRREIVRLVAEISMGAGTLAMIGGTLVIVGFLTLAAGGTLAVQ 87 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 G L G E + L + + +R ++ + +A G+ + A++G+M+INEEIDA+ Sbjct: 88 GYSSLGNIGIEALTGFLAAFINVRISAPVVAGIGLAATFGAGVTAQLGAMRINEEIDALE 147 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 +M + + L+S RI A ++++ L +A + + + V + ++ F + Sbjct: 148 SMAIRPISYLVSTRIVAGMLAITPLYSIAVILSFLASQFVTVVLFGQSGGLYQHYFTTFL 207 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 ++ ++A MA I ++ G+ +G V Sbjct: 208 NPIDLLWSFLQAVLMALTILLIHTYFGYFASGGPAGVGVATGNAV 252 >gi|126436743|ref|YP_001072434.1| hypothetical protein Mjls_4171 [Mycobacterium sp. JLS] gi|126236543|gb|ABN99943.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 284 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 60/262 (22%), Positives = 111/262 (42%), Gaps = 16/262 (6%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP-------VV 171 V N +Q G I + ++ ++ LI QM +GV + +V Sbjct: 21 VNGWNRIGTQTQFYGETIKGIWDAVVH---YRTEVVRLIAQM-SLGVGALAVIGGTIVIV 76 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 ++ G++IA Q QL Q G E + + L +R + L+ + +A G+ A+ Sbjct: 77 GFLTLSAGSLIAVQAYSQLQQVGVEALAGFTSAFLNVRLVSPLVAGIGLAATIGAGATAQ 136 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 +G+M+I+EE+DA+ MG+ V L S R+ A +I + L +A +A Y Sbjct: 137 LGAMRISEEVDALEVMGIRSVAYLASSRVLAGVIVVIPLYCIAVLAAFAATRTGTTLVYG 196 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 V+ F++ ++ ++A MA + +V GF +G+ V V Sbjct: 197 QSTGVYDHYFYTFLNPTDLIYSFLQAISMAVVVMLVHTYYGFTATGGPAGVGEAVGRAVR 256 Query: 352 QSISIVIIIDSLFAIFYFAIGI 373 S+ ++F + ++ I Sbjct: 257 TSLVA-----AVFVTLFVSLAI 273 >gi|126432720|ref|YP_001068411.1| hypothetical protein Mjls_0107 [Mycobacterium sp. JLS] gi|126232520|gb|ABN95920.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 297 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 106/248 (42%), Gaps = 6/248 (2%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVP 169 K + S H+ V++ G + ++ +L LI ++ V V Sbjct: 28 KLVAAPSRGLDSVGHVAWFVVTAVGSIGHALRYYRKEVLRLIAEIGMGTGAMAVIGGTVA 87 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +V ++ G++IA QG L G E F+ +++ +R +++ +A G+ Sbjct: 88 IVGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALVNVRIAAPVVSGQALAATVGAGAT 147 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AE+G+M+I+EEIDA+ MG+ + L+S RI A I + L +A + + A + + Sbjct: 148 AELGAMRISEEIDALEVMGIKSISYLVSTRIMAGFIVIIPLYAMAIIMSFLSAQVTTTLF 207 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 Y + F + ++ ++A ++ + + G+ +G+ V Sbjct: 208 YGQSTGTYEHYFRTFLRPDDVAWSFVQAIIISIIVMLNHCYYGYYASGGPVGVGEAVGRS 267 Query: 350 VVQSISIV 357 + S+ + Sbjct: 268 MRASLIAI 275 >gi|296166534|ref|ZP_06848965.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898146|gb|EFG77721.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 280 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 117/261 (44%), Gaps = 11/261 (4%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV-------P 169 ++ + ++D QA G + + K++ + LI +M +G + Sbjct: 15 RLQEPVDDFGEQALFYGQTVRHVPHAIT---KYRKETIRLIAEM-TMGAGALVMIGGTVG 70 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V ++ +G VIA QG L G E + L + L +R + ++ + +A G+ Sbjct: 71 VAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGAT 130 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A++G+M+++EEIDA+ M ++ V L+S R+ A +I++ L L+ +A A Sbjct: 131 AQLGAMRVSEEIDAVECMAVESVSYLVSTRLIAGLIAIIPLYSLSVLAAFFAARFTTVYI 190 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 ++ F++ +++ ++A M+ A+ +V G+ +G V Sbjct: 191 NGQSKGLYDHYFNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGPVGVGIAVGQA 250 Query: 350 VVQSISIVIIIDSLFAIFYFA 370 V S+ +V++I ++ + Sbjct: 251 VRTSLIVVVVITLFISLAVYG 271 >gi|254822746|ref|ZP_05227747.1| ABC-transporter integral membrane protein [Mycobacterium intracellulare ATCC 13950] Length = 280 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 116/267 (43%), Gaps = 11/267 (4%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV-- 168 + ++ + ++D QA G + +++ + LI +M +G + Sbjct: 9 FRRLFSRLQEPVDDFGEQALFYGQTVRYVPNALT---RYRKETVRLIAEM-TMGAGALVM 64 Query: 169 -----PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 V ++ +G VIA QG L G E + L + L +R + ++ + +A Sbjct: 65 IGGTVGVAAFLTLASGGVIAVQGYSSLGHIGIEALTGFLSAFLNVRVVAPVIAGIALAAT 124 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 G+ A++G+M+++EEIDA+ M + V L+S R+ A +I++ L L+ +A A Sbjct: 125 IGAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLIAIIPLYSLSVLAAFFAAR 184 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 ++ F++ +++ ++A M+ A+ +V G+ +G Sbjct: 185 FTTVYINGQSKGLYDHYFNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGPVGVG 244 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFA 370 V V S+ +V++I ++ + Sbjct: 245 IAVGQAVRTSLIVVVVITLFISLAVYG 271 >gi|206889329|ref|YP_002249685.1| ABC transporter permease protein [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741267|gb|ACI20324.1| ABC transporter permease protein [Thermodesulfovibrio yellowstonii DSM 11347] Length = 223 Score = 154 bits (389), Expect = 3e-35, Method: Composition-based stats. Identities = 54/212 (25%), Positives = 104/212 (49%), Gaps = 1/212 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +RQ+Y+ G+ VP V + + G +I Q A ++ G+ ++ L L+EIG Sbjct: 8 FLRQIYFTGIQAVPAVTISGLLIGLIIVLQTAS-IAGTGSSNMIGKILLWLVLKEIGPFF 66 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 T ++I RSGSAI E+ +MK+ EI+ + MG+ LI PR++ ++ S +L+I Sbjct: 67 TGLIILTRSGSAIATELATMKLGREIEYLEAMGIKPEVYLIKPRLYGVVCSAVILSIYFQ 126 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 +A+ G + IPF+ + + ++ I +K+ I ++ + +G +V Sbjct: 127 LTAMFGGVFLATLMSGIPFSDYANAIVFHLSIKEIVISFLKSLIFGFLISLICIWQGLSV 186 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + ++ T V S+ + +ID + + Sbjct: 187 MKSPTEIPQRATKAVTGSLFSLFLIDVIIDVI 218 >gi|54023081|ref|YP_117323.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54014589|dbj|BAD55959.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 288 Score = 153 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 110/262 (41%), Gaps = 9/262 (3%) Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGV 168 G +++ I A + V+S + +++ + I M + VG V Sbjct: 21 GGLVLRGIESFGFVAVFVWQVLSAVPLTLS---RYRAETMRAITNMTWGRGSIVVGGGTV 77 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 P+++++ V GA + + L G + + + RE+ + AV A ++G I Sbjct: 78 PMMVVLGLVMGASVGVESFATLDMLGMGPVTGIVSAYATTRELAPIAAAVGFAAQAGCRI 137 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIGSM+I+EEIDAI ++GL V +++ R+ A +++ ++A A +I Sbjct: 138 TAEIGSMRISEEIDAIESLGLRSVPFVVTTRVIAGALAIVPTFLIALILAYAACRGLITL 197 Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + V+ F + ++ +IK + +V GF +G Sbjct: 198 LHGQSAGVYDHYFFQFVSGFDVIAAVIKVAVFGTVVILVHSYYGFFAKGGPEGVGIASGR 257 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 V S +I ID + +I + Sbjct: 258 AVRTSFVAIIAIDMVLSIVLWG 279 >gi|119867594|ref|YP_937546.1| hypothetical protein Mkms_1546 [Mycobacterium sp. KMS] gi|119693683|gb|ABL90756.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] Length = 284 Score = 153 bits (388), Expect = 4e-35, Method: Composition-based stats. Identities = 64/276 (23%), Positives = 112/276 (40%), Gaps = 13/276 (4%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 S + +++ +++ G +K L L+ QM +G Sbjct: 4 GSPSRFRPRVHRRVAGWVDGLSRIGTQAQFYFQTLGSTKDVVIHYKVELFRLVAQM-SLG 62 Query: 165 VSGVPVVI-------LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 V + VV ++ TGA++A QG Q + G E + + +R IG ++ Sbjct: 63 VGALAVVGGTVVIVGFLTLSTGALVAVQGYNQFADVGVEALTGFASAYFNVRLIGPVIAG 122 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 + +A G+ A++G+M+INEEIDA+ MG+ V L S R+ A +I + L +A S Sbjct: 123 IGLAATIGAGATAQLGAMRINEEIDALEVMGVRSVAYLASSRVLAGVIVVIPLYCVAVLS 182 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 A A Y V+ F + +I +A MA I +V GF Sbjct: 183 AFWAARFGTIAIYGQSSGVYDHYFTTFLNSTDIIWSFFQAIAMAIVIMLVHTYYGFTATG 242 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 +G+ V V S+ ++ + + ++ I Sbjct: 243 GPAGVGEAVGRAVRTSLIA-----AVLVVLFLSLAI 273 >gi|326331673|ref|ZP_08197961.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] gi|325950472|gb|EGD42524.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] Length = 273 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 53/260 (20%), Positives = 109/260 (41%), Gaps = 4/260 (1%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYK----FKGFLLSLIRQMYYVGVSGVPVV 171 + +G I+ E CA + + + Q +++ + Sbjct: 8 RLATGLWRRFAEGLRTVGETIALGAEACAYAARDIVTGRFDWAQAADQAWFMARVSLLPT 67 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 IL++ G V + Q + GA FS + + LR+ L+T+++IA GSAI ++ Sbjct: 68 ILVAIPFGVVTSIQVGAVANSIGASSFSGAVNGVGVLRQAAPLVTSLIIACVVGSAICSD 127 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 +G I +EI A+ MG + V+ +++PRI A + +LT + +AI ++ Sbjct: 128 LGMRAIRDEIAALEVMGTNPVQRMVAPRIVAAVFLSVMLTAIVAVAAIATGYVMNVGRGV 187 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 + + F + + A+++ KA VA +G + V VV Sbjct: 188 VGAGTYLDAFTNFSQSADLWLAEGKAVLFGLIGTTVAAHKGLGATGGPQGVADAVNQTVV 247 Query: 352 QSISIVIIIDSLFAIFYFAI 371 ++ ++ +++++ Y A+ Sbjct: 248 LNVIVLAVVNAVVTQGYLAL 267 >gi|118471402|ref|YP_884549.1| ABC transporter transmembrane protein [Mycobacterium smegmatis str. MC2 155] gi|118172689|gb|ABK73585.1| ABC-transporter integral membrane protein [Mycobacterium smegmatis str. MC2 155] Length = 289 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 114/267 (42%), Gaps = 16/267 (5%) Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 RS F +F I +F++ A + I + + F+ + +R Sbjct: 8 RSRFPRAFSR-SSEIAATPARFLDSMGHVAWFVVQAIVHV------PHAFRHYRRESLRL 60 Query: 160 MYYVGVSG---------VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210 + +G+ V ++ ++ G++IA QG L G E F+ ++ +R Sbjct: 61 VAEIGMGTGAMAVIGGTVAIIGFVTLSAGSLIAIQGFASLGNIGVEAFTGFFAALANIRV 120 Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 + ++T +A G+ AE+G+M+I+EE+DA+ MG+ + L+S RI A I + L Sbjct: 121 VAPVVTGQALAATVGAGATAELGAMRISEEVDALEVMGIKSISYLVSTRIMAGAIVIIPL 180 Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330 +A + + A +V +Y + FH+ + ++ ++ M+ + + Sbjct: 181 YAMAILLSFMSAQLVTTIFYSQSVGTYEHYFHTFLRVDDVMWSFLEVIIMSVIVMLNHCY 240 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIV 357 G+ + +G+ V + S+ + Sbjct: 241 FGYFASGGAVGVGEAVGRSMRTSLIAI 267 >gi|169631591|ref|YP_001705240.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977] gi|169243558|emb|CAM64586.1| Putative YrbE family protein [Mycobacterium abscessus] Length = 285 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 104/268 (38%), Gaps = 8/268 (2%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 YN + G + F +L + G L+ V Sbjct: 18 YNRIRRPLMRFGHMVAFFFRALSGIPVVLRQYSKEFLRHLSDIAWGNGSLV--------V 69 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G V +++ GA++A + L G + + S+ RE+ ++ ++ A + Sbjct: 70 GGGTAGVALVLGVTAGALVAIESYNFLDLLGLGPATGIISSLASTRELAPIMASLAFAMQ 129 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 +G A++GSM+I EEIDA+ ++ + + L++ R+ A II++ L + + + Sbjct: 130 AGCRFTAQLGSMRIAEEIDAMDSVAIRPIPFLVTTRLMAAIIAVIPLYLACLAISYVSCQ 189 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 +++ + F + +I +IK V GF +G Sbjct: 190 VMVGILSGGSVGSYLHYFGIGVSGIDIVYSIIKTVVFVWIASTVQCYYGFYASGGPEGVG 249 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFAI 371 + +I++V++++ L + +++ Sbjct: 250 IAAGHAMRAAITVVVMVNMLLTMALWSV 277 >gi|226329328|ref|ZP_03804846.1| hypothetical protein PROPEN_03233 [Proteus penneri ATCC 35198] gi|225202514|gb|EEG84868.1| hypothetical protein PROPEN_03233 [Proteus penneri ATCC 35198] Length = 180 Score = 153 bits (387), Expect = 5e-35, Method: Composition-based stats. Identities = 53/176 (30%), Positives = 93/176 (52%), Gaps = 7/176 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 NL IG + + + G +F+ L++Q+Y VGV Sbjct: 1 MINLLSRIGTR-------ALAIFATFGRAGIMLFRALVGKPEFRKQWPLLLKQLYNVGVQ 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++++ G V+ QG L+ F AE ++++ LRE+G ++TA++ AGR+GS Sbjct: 54 SLLIIMVSGLFIGMVLGLQGYLVLTTFSAEASLGMMVALSLLRELGPVVTALLFAGRAGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 A+ AEIG MK E+I ++ M +D +R +++PR WA +IS+PLL+++ +G Sbjct: 114 ALTAEIGLMKATEQISSLEMMAVDPLRRVVAPRFWAGLISMPLLSLIFCCHRYLGW 169 >gi|126436762|ref|YP_001072453.1| hypothetical protein Mjls_4190 [Mycobacterium sp. JLS] gi|126236562|gb|ABN99962.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 255 Score = 153 bits (386), Expect = 6e-35, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 104/243 (42%), Gaps = 4/243 (1%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + L + + F+L Q ++V + +++S + Sbjct: 11 VRALGDFFALAADTMMLIPRRPFAGREFIL----QTWFVARVSLVPTLMLSIPFTVLTVF 66 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 L +FGA FS ++ + +IG L++ +++AG +A+ A++GS I EE+DA+ Sbjct: 67 TLNVLLLEFGAGDFSGSGAALAAVTQIGPLVSVLVVAGAGATAMCADLGSRTIREELDAL 126 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R +G++ V+ L+ PR+ A + LL+ + + ++G ++ F + Sbjct: 127 RVLGINPVQALVVPRVLAATLVSLLLSGVVIVTGLVGGFGFSVFVQNVTPGSFVAGITLL 186 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + L+KA ++A +G +VG ++G V VV S + +ID + Sbjct: 187 TGAPELGIALVKAGLFGLTASLLACYKGISVGGGPAAVGNAVNETVVYSFVSLFVIDVIV 246 Query: 365 AIF 367 Sbjct: 247 TAV 249 >gi|120404937|ref|YP_954766.1| hypothetical protein Mvan_3983 [Mycobacterium vanbaalenii PYR-1] gi|119957755|gb|ABM14760.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 284 Score = 153 bits (386), Expect = 6e-35, Method: Composition-based stats. Identities = 59/243 (24%), Positives = 102/243 (41%), Gaps = 9/243 (3%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVIL 173 N +Q ++ + ++ LL LI QM V V +V Sbjct: 22 AGWNRIGAQMRFYAETLAAVPDAVVH---YRTELLRLIAQMGLGSGALVVVGGTVAIVGF 78 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 ++ TGA++A QG QL+ G E + + +R I T+V ++ G+A A++G Sbjct: 79 LTMTTGALVAVQGYNQLASVGFEALTGFASAFFNVRLIVPGTTSVALSATIGAAATAQLG 138 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 +M+INEEIDA+ +G+ V L + R+ A +I + L +A A + A Y Sbjct: 139 AMRINEEIDALEVIGIRSVTYLAATRVLAGVIVVIPLYCVAVMMAFLAARFGTTVIYGQG 198 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 V+ F + + ++ + M I +V GF +G+ V V S Sbjct: 199 SGVYDHYFGTFLSPTDLIWSFFQCVAMTVVIMLVHTYYGFTASGGPAGVGEAVGRAVRTS 258 Query: 354 ISI 356 + + Sbjct: 259 MVV 261 >gi|183982884|ref|YP_001851175.1| integral membrane protein YrbE3A [Mycobacterium marinum M] gi|183176210|gb|ACC41320.1| conserved hypothetical integral membrane protein YrbE3A [Mycobacterium marinum M] Length = 282 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 49/236 (20%), Positives = 105/236 (44%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + T + S ++ + Q ++V +L++ + L+ Sbjct: 40 LGDFFAMTLDTFVSMFRPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLFNVLLT 99 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 GA FS +I + + ++T +++AG +A+ A++G+ I EE+DA+R MG++ Sbjct: 100 DIGAADFSGTGCAIFTVDQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVMGINP 159 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 ++ L+ PR+ A L+ L + +IGA + + + + + ++ Sbjct: 160 IQALVVPRVLAATTVSLALSSLVIATGLIGAFLCSVFLMHVSAGAWVTGLTTLTHTVDVV 219 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 +IKA G++A +G +VG +G+ V VV + ++ +I+ + Sbjct: 220 ISMIKATLFGLMAGLIACYKGISVGGGPAGVGRAVNETVVFAFVVLFVINIVVTAV 275 >gi|254819936|ref|ZP_05224937.1| TrnB1 protein [Mycobacterium intracellulare ATCC 13950] Length = 262 Score = 152 bits (385), Expect = 7e-35, Method: Composition-based stats. Identities = 52/233 (22%), Positives = 101/233 (43%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G + T + + I Q ++V + IL+S A+ L Sbjct: 21 VGSYFALTLDIFTQLVRPPFAWREFIHQAWFVARVSIAPTILLSIPFNALSVFIINVLLV 80 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + GA S ++ + IG + T +++AG +AI A++G+ I EE+DA+R MG++ Sbjct: 81 EIGAADASGAGAALASVAYIGPITTVLVVAGTGATAICADLGARTIREELDAMRVMGINP 140 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V+ L+ PR+ AL ++ LL + ++G+ + + + + +A++ Sbjct: 141 VQRLLVPRVLALCLNGLLLNSINTIVGLVGSFFFSVYFQHVTPGAWAASLTLLVKIADVA 200 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 KA G +A +G VG +G V VV + + +I+ + Sbjct: 201 IAFFKAALFGLVAGTIACYKGVTVGGGPQGVGNAVNETVVYTFMALFVINVVL 253 >gi|15609102|ref|NP_216481.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis H37Rv] gi|15841440|ref|NP_336477.1| hypothetical protein MT2017 [Mycobacterium tuberculosis CDC1551] gi|148661774|ref|YP_001283297.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis H37Ra] gi|148823179|ref|YP_001287933.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis F11] gi|253798987|ref|YP_003031988.1| hypothetical protein TBMG_02025 [Mycobacterium tuberculosis KZN 1435] gi|254232135|ref|ZP_04925462.1| hypothetical integral membrane protein yrbE3B [Mycobacterium tuberculosis C] gi|254364784|ref|ZP_04980830.1| hypothetical integral membrane protein yrbE3B [Mycobacterium tuberculosis str. Haarlem] gi|260201058|ref|ZP_05768549.1| hypothetical protein MtubT4_13284 [Mycobacterium tuberculosis T46] gi|289443449|ref|ZP_06433193.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis T46] gi|289570055|ref|ZP_06450282.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis T17] gi|289746096|ref|ZP_06505474.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis 02_1987] gi|289750549|ref|ZP_06509927.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis T92] gi|289754062|ref|ZP_06513440.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis EAS054] gi|289758075|ref|ZP_06517453.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|289762120|ref|ZP_06521498.1| hypothetical integral membrane protein yrbE3B [Mycobacterium tuberculosis GM 1503] gi|294996887|ref|ZP_06802578.1| hypothetical protein Mtub2_20873 [Mycobacterium tuberculosis 210] gi|297634534|ref|ZP_06952314.1| hypothetical protein MtubK4_10446 [Mycobacterium tuberculosis KZN 4207] gi|297731522|ref|ZP_06960640.1| hypothetical protein MtubKR_10551 [Mycobacterium tuberculosis KZN R506] gi|306776197|ref|ZP_07414534.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu001] gi|306779978|ref|ZP_07418315.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu002] gi|306784728|ref|ZP_07423050.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu003] gi|306789085|ref|ZP_07427407.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu004] gi|306793420|ref|ZP_07431722.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu005] gi|306797803|ref|ZP_07436105.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu006] gi|306803684|ref|ZP_07440352.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu008] gi|306808258|ref|ZP_07444926.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu007] gi|306968081|ref|ZP_07480742.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu009] gi|306972306|ref|ZP_07484967.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu010] gi|307080017|ref|ZP_07489187.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu011] gi|307084591|ref|ZP_07493704.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu012] gi|313658855|ref|ZP_07815735.1| hypothetical protein MtubKV_10561 [Mycobacterium tuberculosis KZN V2475] gi|2950435|emb|CAA17838.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE3B [Mycobacterium tuberculosis H37Rv] gi|13881679|gb|AAK46291.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|124601194|gb|EAY60204.1| hypothetical integral membrane protein yrbE3B [Mycobacterium tuberculosis C] gi|134150298|gb|EBA42343.1| hypothetical integral membrane protein yrbE3B [Mycobacterium tuberculosis str. Haarlem] gi|148505926|gb|ABQ73735.1| conserved hypothetical integral membrane protein YrbE3b [Mycobacterium tuberculosis H37Ra] gi|148721706|gb|ABR06331.1| hypothetical integral membrane protein yrbE3B [Mycobacterium tuberculosis F11] gi|253320490|gb|ACT25093.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis KZN 1435] gi|289416368|gb|EFD13608.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis T46] gi|289543809|gb|EFD47457.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis T17] gi|289686624|gb|EFD54112.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis 02_1987] gi|289691136|gb|EFD58565.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis T92] gi|289694649|gb|EFD62078.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis EAS054] gi|289709626|gb|EFD73642.1| hypothetical integral membrane protein yrbE3B [Mycobacterium tuberculosis GM 1503] gi|289713639|gb|EFD77651.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|308215377|gb|EFO74776.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu001] gi|308327132|gb|EFP15983.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu002] gi|308330568|gb|EFP19419.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu003] gi|308334402|gb|EFP23253.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu004] gi|308338198|gb|EFP27049.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu005] gi|308341893|gb|EFP30744.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu006] gi|308345382|gb|EFP34233.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu007] gi|308349685|gb|EFP38536.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu008] gi|308354315|gb|EFP43166.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu009] gi|308358257|gb|EFP47108.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu010] gi|308362185|gb|EFP51036.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu011] gi|308365842|gb|EFP54693.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu012] gi|323719530|gb|EGB28656.1| hypothetical protein TMMG_01226 [Mycobacterium tuberculosis CDC1551A] gi|326903572|gb|EGE50505.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis W-148] gi|328458742|gb|AEB04165.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis KZN 4207] Length = 271 Score = 152 bits (385), Expect = 8e-35, Method: Composition-based stats. Identities = 60/257 (23%), Positives = 107/257 (41%), Gaps = 9/257 (3%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVP 169 K +V N SQ ++ + ++G LL +I QM V V Sbjct: 5 KALVSEWNRMGSQMRFFVGTLAGIPDALMH---YRGELLRVIAQMGLGTGVLAVIGGTVA 61 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +V ++ TGA++A QG Q + G E + + REI V +A G+ Sbjct: 62 IVGFLAMTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTT 121 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A +G+M+INEEIDA+ +G+ + L S R+ A ++ L + +A + A + Sbjct: 122 AALGAMRINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAI 181 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 Y V+ F++ ++ ++ +A I +V G+A +G+ V Sbjct: 182 YGQGSGVYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRA 241 Query: 350 VVQSISIVIIIDSLFAI 366 V S+ + I + + Sbjct: 242 VRASMVVASIAILVMTL 258 >gi|254818327|ref|ZP_05223328.1| hypothetical protein MintA_00285 [Mycobacterium intracellulare ATCC 13950] Length = 261 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 93/225 (41%), Gaps = 9/225 (4%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---------VPVVILISFVTGAVIAQQ 185 + + + +IR + + + + +V ++ G V+A Q Sbjct: 8 TLFYARALAGVPFATAHYRREIIRLIAEISMGAGTLAMIGGTLGIVGFMTLAAGGVLAVQ 67 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 G L G E + L + + +R ++ + +A G+ + A++G+M+INEEIDA+ Sbjct: 68 GYSSLGNIGIEALTGFLSAFINVRIAAPIVAGIGLAATFGAGVTAQLGAMRINEEIDALE 127 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 +M + V L+S RI A ++++ L +A + + + + + ++ F + Sbjct: 128 SMAIRPVSYLVSTRIVAGMLAVTPLYSIAVILSFVASQFITVFMFGQSSGLYQHYFTTFL 187 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 ++ ++A MA + ++ G+ +G V Sbjct: 188 NPIDLLWSFLQAVLMALTVLLIHTYFGYFASGGPAGVGVATGNAV 232 >gi|118467231|ref|YP_881722.1| TrnB1 protein [Mycobacterium avium 104] gi|118168518|gb|ABK69415.1| TrnB1 protein [Mycobacterium avium 104] Length = 261 Score = 152 bits (384), Expect = 1e-34, Method: Composition-based stats. Identities = 51/233 (21%), Positives = 100/233 (42%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G + T + + Q ++V + IL+S A+ L Sbjct: 20 VGSYFALTLDIFVQLVHPPFAWREFVHQAWFVARVSIAPTILLSIPFNALSVFIINVLLV 79 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + GA S ++ + IG + T +++AG +AI A++G+ I EE+DA+R MG++ Sbjct: 80 EIGAADASGAGAALASVAYIGPITTVLVVAGTGATAICADLGARTIREELDAMRVMGINP 139 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V+ L+ PR+ AL ++ LL + ++G+ + + + + +A++ Sbjct: 140 VQRLLVPRVLALCLNGLLLNSINTIVGLVGSFFFSVYFQHVTPGAWAASLTLLVKIADVA 199 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 KA G +A +G VG +G V VV + + +I+ + Sbjct: 200 IAFFKAALFGLVAGTIACYKGVTVGGGPQGVGNAVNETVVYTFMALFVINVVL 252 >gi|324999479|ref|ZP_08120591.1| hypothetical protein PseP1_11961 [Pseudonocardia sp. P1] Length = 274 Score = 151 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 45/269 (16%), Positives = 103/269 (38%), Gaps = 15/269 (5%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV----- 165 + + + ++D QA G I+ + K + +R + VG+ Sbjct: 3 LRSVLRAPLALLDDLGKQAEFYGKSIA------WTPKAIKSYKTEQVRLIAEVGMSNGAL 56 Query: 166 ----SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221 + I+ G Q LS E +I+ R + ++ +A Sbjct: 57 AVIGGSSIITFFITMFAGVTGGVQTFDALSDLQLEALGGFTSAIIAPRLLTPIIGGAALA 116 Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281 GS A++G+M+++EEIDA+ MG+ + L++ R+ A +I++ + +A IG Sbjct: 117 ATVGSGFTAQLGAMRVSEEIDALEVMGVRSLPYLVTTRLVAGMITIIPIFAMAMVGGWIG 176 Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341 + ++ + + + ++ + +A + ++ G+ Sbjct: 177 WKLTQVNFFGLSAGTYDHYMTTFLQWEDVLYSFAQGLGIAIVVILIHTYYGYTASGGPAG 236 Query: 342 LGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +G V V S+ V+ ++ + A+ + Sbjct: 237 VGLAVGKAVRTSLIAVLAVNLVIAMALYG 265 >gi|118465348|ref|YP_881277.1| TrnB2 protein [Mycobacterium avium 104] gi|118166635|gb|ABK67532.1| TrnB2 protein [Mycobacterium avium 104] Length = 282 Score = 151 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 64/262 (24%), Positives = 112/262 (42%), Gaps = 9/262 (3%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VG 164 +G ++V+ Q G ++ + ++ G LL LI +M V Sbjct: 11 FAALGPRLVESTRKLGEQTVFYGQSLTAIADAIR---RYPGELLRLIAEMGMGTGALAVI 67 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V ++ ++ TGA++A QG LS G E + L + L +R I + +A Sbjct: 68 GGTVGIIGFLTLTTGALVAVQGYDTLSNIGVEALTGFLSAFLNVRMIAPCTAGLALAATI 127 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 G+ A++G+M+INEEIDA+ MG+ V L S RI A I+ + L +A + I A + Sbjct: 128 GAGATAQLGAMRINEEIDALEVMGIRAVTYLASTRIIAGILVVIPLYAVAVLMSFIAAKL 187 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 + Y V+ F + ++ A MA + +V GF +G+ Sbjct: 188 LTIYVYGQSKGVYEHYFSTFLRPNDLLWSFFSALAMATGVMVVHTYYGFTATGGPAGVGE 247 Query: 345 KVTTCVVQSISIVIIIDSLFAI 366 V V S+ + + + ++ Sbjct: 248 AVGRSVRSSMIVTAFVCLMISL 269 >gi|118472034|ref|YP_884758.1| hypothetical protein MSMEG_0345 [Mycobacterium smegmatis str. MC2 155] gi|118173321|gb|ABK74217.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length = 272 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 56/260 (21%), Positives = 109/260 (41%), Gaps = 9/260 (3%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPV 170 ++ + Q I + G+ ++ L+ LI M V V + Sbjct: 7 RVRAAWDGIGVQTQFYARAIGSIGDAA---MNYRTELIRLIATMGLGAGALAVVGGTVAI 63 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 V ++ TGA++A QG Q + G E + + +R I TAV ++ G+ A Sbjct: 64 VGFLTMTTGALVAVQGYNQFASVGVEALTGFASAFFNVRLIAPGTTAVALSATIGAGATA 123 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 ++G+M+INEEIDA+ +G+ V L S R+ A +I + L +A + I + + Y Sbjct: 124 QLGAMRINEEIDALEVIGIRSVSYLASTRVAAGVIVVIPLYCVAVIMSFISSRLGTTVIY 183 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 V+ F++ ++ ++ + I +V G+ +G+ V V Sbjct: 184 GQGSGVYDHYFNTFLNTNDLLWSFGQSVAITVVIMLVHTYYGYTASGGPAGVGEAVGRAV 243 Query: 351 VQSISIVIIIDSLFAIFYFA 370 S+ + I+ + ++ + Sbjct: 244 RTSLIVAAIVVVMISLALYG 263 >gi|254774785|ref|ZP_05216301.1| TrnB2 protein [Mycobacterium avium subsp. avium ATCC 25291] Length = 282 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 64/262 (24%), Positives = 112/262 (42%), Gaps = 9/262 (3%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VG 164 +G ++V+ Q G ++ + ++ G LL LI +M V Sbjct: 11 FAALGPRLVESTRKLGEQTVFYGQSLAAIADAIR---RYPGELLRLIAEMGMGTGALAVI 67 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V ++ ++ TGA++A QG LS G E + L + L +R I + +A Sbjct: 68 GGTVGIIGFLTLTTGALVAVQGYDTLSNIGVEALTGFLSAFLNVRMIAPCTAGLALAATI 127 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 G+ A++G+M+INEEIDA+ MG+ V L S RI A I+ + L +A + I A + Sbjct: 128 GAGATAQLGAMRINEEIDALEVMGIRAVTYLASTRIIAGILVVIPLYAVAVLMSFIAAKL 187 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 + Y V+ F + ++ A MA + +V GF +G+ Sbjct: 188 LTIYVYGQSKGVYEHYFSTFLRPNDLLWSFFSALAMATGVMVVHTYYGFTATGGPAGVGE 247 Query: 345 KVTTCVVQSISIVIIIDSLFAI 366 V V S+ + + + ++ Sbjct: 248 AVGRSVRSSMIVTAFVCLMISL 269 >gi|124514232|gb|EAY55746.1| probable ABC transporter, permease protein [Leptospirillum rubarum] Length = 261 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 114/251 (45%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 V F + ++++ +F + L + Q+ + G+ +P++ ++SF Sbjct: 6 SAVNFFKIFFYLRDLAQIILTGLYDFFLVLLTRRNALPLFLNQILFNGLDALPILTVVSF 65 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 + G + +L + G + ++ + LR +G TA+++ R+ S++ EIG+M+ Sbjct: 66 LVGMGTVAEAGIELPKLGVQNLVGPIILHIILRIVGPFTTALIVTARTASSLTVEIGNMR 125 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 I+ E+D I MG + L++PR++ I+S L++ A IG ++ + +P Sbjct: 126 ISGELDTIEMMGANISYFLLAPRLFGAIVSTVALSLYFAVIAFIGGLLIAFFGLSMPIVS 185 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 ++ L ++ L+++ I V G VG + ++ T +V SI + Sbjct: 186 LIRALETSINLPDLLIPLVESITYGSIIAAVGSYHGLKVGDSPTDVPQQTTRALVSSIVL 245 Query: 357 VIIIDSLFAIF 367 + + F +F Sbjct: 246 CTLFSTFFLVF 256 >gi|206602875|gb|EDZ39356.1| Probable ABC transporter, permease protein [Leptospirillum sp. Group II '5-way CG'] Length = 261 Score = 150 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 115/251 (45%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 V F + ++++ +F + L + Q+ + G+ +P++ ++SF Sbjct: 6 SAVNFFKIFFYLRDLAQIILTGLYDFFLVLLTRRNALPLFLNQILFNGLDALPILTVVSF 65 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 + G + +L + G + ++ + LR +G TA+++ R+ S++ EIG+M+ Sbjct: 66 LVGMGTVAEAGIELPKLGVQNLVGPIILHIILRIVGPFTTALIVTARTASSLTVEIGNMR 125 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 I+ E+D I MG + L++PR++ I+S L++ A +G ++ + +P Sbjct: 126 ISGELDTIEMMGANISYFLLAPRLFGAIVSTVALSLYFAVIAFLGGLLIAFFGLSMPIVS 185 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 ++ L+++ L+++ I V G VG + ++ T +V SI + Sbjct: 186 LIRALETSINLSDLLIPLVESITYGSIIAAVGSYHGLKVGDSPADVPQQTTRALVSSIVL 245 Query: 357 VIIIDSLFAIF 367 + + F +F Sbjct: 246 CTLFSTFFLVF 256 >gi|169628784|ref|YP_001702433.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977] gi|169240751|emb|CAM61779.1| Putative YrbE family protein [Mycobacterium abscessus] Length = 272 Score = 150 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 46/253 (18%), Positives = 102/253 (40%), Gaps = 9/253 (3%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL---------ISFVT 178 A +V F A + + +R + + +V+ + Sbjct: 12 LARFGHMVTFFVHAFLAIPIALRRYRREFLRLLSDITWGNGSIVVGGGTAGVVLVLGVTA 71 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA++A +G L G + + S++ RE+ ++ A+ A ++G ++GSM+I Sbjct: 72 GALVAIEGYNFLELMGLGPATGVISSLVTTRELAPIMAALAFAVQAGCRFTTQLGSMRIA 131 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE+DA+ ++ + + L++ R+ A ++++ L + + + I++ + Sbjct: 132 EEVDAMDSLAIRPIPYLVTTRLLASVVAIIPLYVACLTISYLSCQIMVGIVSGGSMGPYL 191 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 F A+ +I + KA V GF +G + SI+ VI Sbjct: 192 HYFTLLASGTDIAYSVGKAIIFVWIASAVQCYYGFCADGGPEGVGIAAGHAMRASITAVI 251 Query: 359 IIDSLFAIFYFAI 371 I++ L + +++ Sbjct: 252 IVNMLLTMALWSV 264 >gi|317508278|ref|ZP_07965958.1| hypothetical protein HMPREF9336_02330 [Segniliparus rugosus ATCC BAA-974] gi|316253453|gb|EFV12843.1| hypothetical protein HMPREF9336_02330 [Segniliparus rugosus ATCC BAA-974] Length = 290 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 53/255 (20%), Positives = 100/255 (39%), Gaps = 3/255 (1%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLI--RQMYYVGVSGVPVVILIS 175 + F GLV+ + + + L+ L VG + V+ ++ Sbjct: 27 LGFFERMGHVLTFFGLVLGAVPHTFRAYGRQIRETLIDLTWGNGRIIVGGGTLSVLAVLG 86 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G VI + LS + + + RE G L A+ A ++G I AE+G+M Sbjct: 87 LSIGGVIGLEAYNALSIVNLGPLTGFISAYGMTREFGPLAAALGFAAQAGCRITAEVGAM 146 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 +I EEIDA+ G+ + +++ R+ A I + + +L S+V+ + Sbjct: 147 RIAEEIDALEATGIRSIPFVVTTRVIAGIAVILPVYLLTLILGYEACSLVVNLLNNQSAG 206 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + F ++ LIK + IV +G+ +G + SI Sbjct: 207 TYNYYFMRFLVPQDVVLSLIKTAIFIVVVVIVHGYQGYYASGGPEGVGLASGRAIRSSIV 266 Query: 356 IVIIIDSLFAIFYFA 370 IV+I++ L + ++ Sbjct: 267 IVVILNMLLTLLFWG 281 >gi|108798493|ref|YP_638690.1| hypothetical protein Mmcs_1523 [Mycobacterium sp. MCS] gi|108768912|gb|ABG07634.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] Length = 272 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 63/265 (23%), Positives = 110/265 (41%), Gaps = 13/265 (4%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI--- 172 +++ +++ G +K L L+ QM +GV + VV Sbjct: 3 RRVAGWVDGLSRIGTQAQFYFQTLGSTKDVVIHYKVELFRLVAQM-SLGVGALAVVGGTV 61 Query: 173 ----LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ TGA++A QG Q + G E + + +R IG ++ + +A G+ Sbjct: 62 VIVGFLTLSTGALVAVQGYNQFADVGVEALTGFASAYFNVRLIGPVIAGIGLAATIGAGA 121 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 A++G+M+INEEIDA+ MG+ V L S R+ A +I + L +A SA A Sbjct: 122 TAQLGAMRINEEIDALEVMGVRSVAYLASSRVLAGVIVVIPLYCVAVLSAFWAARFGTIA 181 Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 Y V+ F + +I +A MA I +V GF +G+ V Sbjct: 182 IYGQSSGVYDHYFTTFLNSTDIIWSFFQAIAMAIVIMLVHTYYGFTATGGPAGVGEAVGR 241 Query: 349 CVVQSISIVIIIDSLFAIFYFAIGI 373 V S+ ++ + + ++ I Sbjct: 242 AVRTSLIA-----AVLVVLFLSLAI 261 >gi|183984956|ref|YP_001853247.1| membrane protein YrbE4B [Mycobacterium marinum M] gi|183178282|gb|ACC43392.1| conserved hypothetical membrane protein YrbE4B [Mycobacterium marinum M] Length = 280 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 55/260 (21%), Positives = 116/260 (44%), Gaps = 9/260 (3%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPV 170 ++V+ +++ QA G + +++ + L+ +M + V V Sbjct: 15 RLVRPVDNFGEQALFYGETVRYIPNAIT---RYRKETIRLVAEMTLGAGALVMIGGTVGV 71 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 ++ +G VIA QG L G E + L + L +R + ++ + +A G+ A Sbjct: 72 AAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATA 131 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 ++G+M+++EEIDA+ M + V L+S R+ A ++++ L LA +A A Sbjct: 132 QLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLAVLAAFFAARFTTVFIN 191 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 ++ F++ +++ ++A MA A+ +V G+ S +G V V Sbjct: 192 GQSAGLYDHYFNTFLIPSDLLWSFLQAIVMAIAVMLVHTYYGYNASGGSVGVGIAVGQAV 251 Query: 351 VQSISIVIIIDSLFAIFYFA 370 S+ +V++I ++ + Sbjct: 252 RTSLIVVVVITLFISLAVYG 271 >gi|254822927|ref|ZP_05227928.1| hypothetical protein MintA_23569 [Mycobacterium intracellulare ATCC 13950] Length = 289 Score = 150 bits (379), Expect = 4e-34, Method: Composition-based stats. Identities = 55/256 (21%), Positives = 110/256 (42%), Gaps = 10/256 (3%) Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 RS F + +NL+ + G + ++D A G+ +++ ++ L L+ Q Sbjct: 8 RSRFPRAAENLNRY-GLAAARGLDDIGQMAWFGGVALAHIPHALR---NYRKETLRLVAQ 63 Query: 160 M------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 + V V +V ++ +++A QG L G E F+ +++ +R Sbjct: 64 IGMGTGAMAVIGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAAP 123 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 ++T + +A G+ AE+G+M+I+EEIDA+ MG+ + L + RI A ++ + L L Sbjct: 124 VVTGIAMAATVGAGATAELGAMRISEEIDALEVMGIKSISFLATTRIMAGLVVIIPLYAL 183 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 A + + I Y + F + ++F ++A + + I G+ Sbjct: 184 AMIMSFLSPQITTTVLYGQSNGTYEHYFRTFLRPDDVFWSFLEAILITAVVMITHCFYGY 243 Query: 334 AVGVHSNSLGKKVTTC 349 G +G+ V Sbjct: 244 NAGGGPVGVGEAVGRS 259 >gi|240170055|ref|ZP_04748714.1| hypothetical integral membrane protein [Mycobacterium kansasii ATCC 12478] Length = 280 Score = 150 bits (379), Expect = 4e-34, Method: Composition-based stats. Identities = 52/260 (20%), Positives = 114/260 (43%), Gaps = 9/260 (3%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVPV 170 ++ + ++ QA G + +++ + L+ +M + V V Sbjct: 15 RLQEPVDSFGEQALFYGETVRYIPNAIT---RYRKETIRLVAEMTLGAGALVMIGGTVGV 71 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 ++ +G VIA QG L G E + L + L +R + ++ + +A G+ A Sbjct: 72 AAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATA 131 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 ++G+M+++EEIDA+ M + V L+S R+ A ++++ L L+ +A A Sbjct: 132 QLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARFTTVFIN 191 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 ++ F++ +++ ++A M+ A+ +V G+ S +G V V Sbjct: 192 GQSKGLYDHYFNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGSVGVGIAVGQAV 251 Query: 351 VQSISIVIIIDSLFAIFYFA 370 S+ +V++I ++ + Sbjct: 252 RTSLIVVVVITLFISLAVYG 271 >gi|145221307|ref|YP_001131985.1| hypothetical protein Mflv_0712 [Mycobacterium gilvum PYR-GCK] gi|315441805|ref|YP_004074684.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|145213793|gb|ABP43197.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] gi|315260108|gb|ADT96849.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 290 Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats. Identities = 51/277 (18%), Positives = 113/277 (40%), Gaps = 6/277 (2%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 + + F K + S H+ V++ G + ++ +L LI ++ Sbjct: 6 AVLRSRFPRGVARAEKIVGAPGRGLDSIGHVAWFVVTAVGSIGHAVRYYRKEMLRLIAEI 65 Query: 161 ------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 V V +V ++ +++A QG L G E F+ +++ +R + Sbjct: 66 GMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAAPV 125 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 + +A G+ AE+G+M+I+EEIDA+ MG+ + L+S RI A + + L +A Sbjct: 126 VAGQALAATVGAGATAELGAMRISEEIDALEVMGIKSISYLVSTRIVAGFVVIIPLYAMA 185 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 + + A +Y + F + ++F ++A ++ + + GF Sbjct: 186 IIMSFLSAQATTTIFYGQSTGTYEHYFRTFLRPDDVFWSFVQAVIISVIVMLNHCYYGFY 245 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +G+ V + S+ ++ + ++ + + Sbjct: 246 ASGGPVGVGEAVGRSMRASLVAIVCVVLFASLALYGV 282 >gi|118463838|ref|YP_884136.1| hypothetical protein MAV_5016 [Mycobacterium avium 104] gi|254776558|ref|ZP_05218074.1| hypothetical protein MaviaA2_18084 [Mycobacterium avium subsp. avium ATCC 25291] gi|118165125|gb|ABK66022.1| conserved hypothetical protein [Mycobacterium avium 104] Length = 289 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 111/256 (43%), Gaps = 10/256 (3%) Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 RS F + +NL+ + G + ++D A G+ +++ + ++ L LI Q Sbjct: 8 RSRFPRAAENLNRY-GLAAARGLDDVGQMAWFGGVALAHIPHALSH---YRKETLRLIAQ 63 Query: 160 M------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 + V V +V ++ +++A QG L G E F+ +++ +R Sbjct: 64 IGMGTGAMAVIGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAAP 123 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 ++T + +A G+ AE+G+M+I+EEIDA+ MG+ + L + RI A ++ + L L Sbjct: 124 VVTGIAMAATVGAGATAELGAMRISEEIDALEVMGIKSISFLATTRIMAGLVVIIPLYAL 183 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 A + + I Y + F + ++F ++A + + I G+ Sbjct: 184 AMIMSFLSPQITTTVLYGQSNGTYEHYFRTFLRPDDVFWSFLEAIIITAVVMITHCFYGY 243 Query: 334 AVGVHSNSLGKKVTTC 349 G +G+ V Sbjct: 244 NAGGGPVGVGEAVGRS 259 >gi|118619253|ref|YP_907585.1| membrane protein YrbE4B [Mycobacterium ulcerans Agy99] gi|118571363|gb|ABL06114.1| conserved hypothetical membrane protein YrbE4B [Mycobacterium ulcerans Agy99] Length = 280 Score = 149 bits (376), Expect = 8e-34, Method: Composition-based stats. Identities = 54/260 (20%), Positives = 115/260 (44%), Gaps = 9/260 (3%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPV 170 ++ + +++ QA G + +++ + L+ +M + V V Sbjct: 15 RLARPVDNLGEQALFYGETVRYIPNATT---RYRKETIRLVAEMTLGAGALVMIGGTVGV 71 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 ++ +G VIA QG L G E + L + L +R + ++ + +A G+ A Sbjct: 72 AAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATA 131 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 ++G+M+++EEIDA+ M + V L+S R+ A ++++ L LA +A A Sbjct: 132 QLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLAVLAAFFAARFTTVFIN 191 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 ++ F++ +++ ++A MA A+ +V G+ S +G V V Sbjct: 192 GQSAGLYDHYFNTFLIPSDLLWSFLQAIVMAIAVMLVHTYYGYNASGGSVGVGIAVGQAV 251 Query: 351 VQSISIVIIIDSLFAIFYFA 370 S+ +V++I ++ + Sbjct: 252 RTSLIVVVVITLFISLAVYG 271 >gi|54024946|ref|YP_119188.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54016454|dbj|BAD57824.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 295 Score = 149 bits (376), Expect = 8e-34, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 106/262 (40%), Gaps = 10/262 (3%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY-------VGVSGV 168 ++ + + Q ++ G +++ ++++ + + VG Sbjct: 28 QRAWDPLEELGFQLRFGIAAVAGVGWALR---RYRAQVVAVFTDLAWGNGRAVIVGGGVA 84 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 PV++++ V GA+I G L G + + ++ RE+ L+ AV A ++G + Sbjct: 85 PVLVVMGVVAGAMIGLVGITALDTLGMGPLAGAMSALANPRELAPLIAAVGFAAQAGCRM 144 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG+M+I EEIDA+ +D + ++S R+ A ++++ ++A + + + Sbjct: 145 TAEIGAMRIAEEIDALEAQAIDPIPYVVSTRLLAAVLTVVPTYLIALALGFLTTKLTVTA 204 Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F F ++ L+K + V +GF +G Sbjct: 205 VHGEAAGSFEHYFQMFVEPRDLVYSLVKVVIFVVIVTGVHAYQGFYATGGPEGVGVASGR 264 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 + S+ ++ D + + + Sbjct: 265 AIRASLVLIATADMVLTVAMWG 286 >gi|83584337|gb|ABC24943.1| plastid permease-like protein [Prototheca wickerhamii] Length = 248 Score = 148 bits (375), Expect = 9e-34, Method: Composition-based stats. Identities = 43/155 (27%), Positives = 81/155 (52%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + G+ + K + + Q+ VG + V +L SF G V Q + ++ G Sbjct: 94 LVIAGQSIWRICQGKIHWRNTLEQLNLVGPRSLGVCLLTSFFLGMVFTIQFIREFTRLGL 153 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 ++ + RE+ ++T++++AGR GSA AE+G+M+++E+ D++R +G D + L Sbjct: 154 TRTVGGVLGLALARELTPVVTSIIVAGRVGSAFAAELGTMQVSEQTDSLRVLGSDPIDYL 213 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 I+PRI A +I+ PLL I+ + ++ Y Sbjct: 214 ITPRILACMIATPLLNIMCLCMGFAASMLLAEAAY 248 >gi|317508277|ref|ZP_07965957.1| hypothetical protein HMPREF9336_02329 [Segniliparus rugosus ATCC BAA-974] gi|316253452|gb|EFV12842.1| hypothetical protein HMPREF9336_02329 [Segniliparus rugosus ATCC BAA-974] Length = 280 Score = 148 bits (375), Expect = 9e-34, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 116/269 (43%), Gaps = 3/269 (1%) Query: 99 QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158 Q++ + + L ++ ++ + L + + + I Sbjct: 5 QKADRTSVVERLVAYLFDTVLTSLRTLG---RWFMLAFGAFRFLVVDTIRLRHPWKETIH 61 Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 Q +++ +L+S G ++ Q Q GA + + +R+ ++ A+ Sbjct: 62 QCWFITSVTAVPALLVSVPFGIIVMVQVGNLTQQIGAASLTGAAGGLGVIRQGAPIVAAL 121 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++ G +GSAI A++G+ I EEIDA+R +G++ + L++PR+ A++ P+L + F Sbjct: 122 LLGGAAGSAIAADLGARTIREEIDAMRVIGINPTQRLVAPRLAAMLFVSPMLCVFIVFIT 181 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 + ++ + D+ + + F + A L++I+ + K+ F + IVA + G Sbjct: 182 MTAGYLLAVMFQDVTPGSYLASFGAFAKLSDIYVAIGKSVFFGIVVVIVACQRGLETKFG 241 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + + V VV + +++ + Sbjct: 242 PRGVAESVNASVVLGVLATFVLNVVVTQI 270 >gi|326330431|ref|ZP_08196739.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1] gi|325951706|gb|EGD43738.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1] Length = 256 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 52/241 (21%), Positives = 99/241 (41%), Gaps = 1/241 (0%) Query: 132 LGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190 +G G ++ K +G+ + +M+Y+ V L +IA + Sbjct: 8 MGEAGRLLGYLVKTAVKEPRGYWTATRDEMFYMLQFCWLPVTLAVGGFSFLIANYAYDLV 67 Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 GA LREI T + +AG G+A+ A++G+ KI EE+DA +G+D Sbjct: 68 GLLGAGNRLGTYFVFASLREISPFATGMAVAGVMGTAMTADLGARKIREELDAFTVLGID 127 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 +R L+ PR+ A+ + + I+ + + A I F + T+ + Sbjct: 128 AIRTLVLPRVIAITVMMVAFNIVGSLLGMSMAMISATWLGTTSPGAFLGNLLGSMTVPEL 187 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +K + IG+V+ ++G + +G+ V VV S + V + + + Sbjct: 188 VGTTVKCTLIGLFIGVVSAQKGLNAKGGAEGVGRAVNEAVVLSFAAVWVANFIVNATMLG 247 Query: 371 I 371 + Sbjct: 248 L 248 >gi|302523372|ref|ZP_07275714.1| ABC-transporter integral membrane protein [Streptomyces sp. SPB78] gi|318059764|ref|ZP_07978487.1| ABC-transporter integral membrane protein [Streptomyces sp. SA3_actG] gi|318075808|ref|ZP_07983140.1| ABC-transporter integral membrane protein [Streptomyces sp. SA3_actF] gi|302432267|gb|EFL04083.1| ABC-transporter integral membrane protein [Streptomyces sp. SPB78] Length = 268 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 103/241 (42%), Gaps = 6/241 (2%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVILISFVTGAVIAQQ 185 L + + ++ + L+ ++ + V V V+I ++ TG V+ Q Sbjct: 15 LLFYLRALLWIPRTLARYAKEVQRLLAEVVFGSGGLSVIGGTVGVMIGMTAATGTVVGLQ 74 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 G + Q G + + + RE+ L+ + ++ G+ A++G+M+INEE+DA+ Sbjct: 75 GFAAMDQIGTAPLTGFVTAYFNTREVAPLVAGLALSATVGAGFTAQLGAMRINEEVDALE 134 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MG+ + L++ RI A ++++ L L S+ + + +V + + F+ Sbjct: 135 GMGIRAMPYLVTTRIIAGVVAIIPLYALGLLSSYVASRVVTVVFNGQSSGTYDHYFNLFL 194 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 ++ ++K + + + GF +G V V +I ++ + D + Sbjct: 195 VPEDVLLSVLKVLVFSVMVILAHCYYGFRAQGGPAGVGVAVGRSVRNAIVLIAVTDFFLS 254 Query: 366 I 366 + Sbjct: 255 L 255 >gi|169628783|ref|YP_001702432.1| hypothetical protein MAB_1693 [Mycobacterium abscessus ATCC 19977] gi|169240750|emb|CAM61778.1| Conserved hypothetical protein (YrbE family?) [Mycobacterium abscessus] Length = 289 Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats. Identities = 55/236 (23%), Positives = 104/236 (44%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + F A + +RQ ++ + V +L++ G ++ Q A Q GA Sbjct: 48 VHTLRYFVADLVMGRFQWAEFVRQAAFMAGTAVMPTVLVALPIGVTLSIQFALLAGQVGA 107 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 + + +R+ L+ A+++A GSA+ A++G + EE A+ MG+ VR L Sbjct: 108 TSLAGAASGLAVVRQAASLVAAMLLASAVGSAMTADLGCRTMREETAAMEVMGVSVVRRL 167 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PR A I+ LT + F + + + F S F S AT A++ L Sbjct: 168 VVPRFAAAIVIGIALTGVVCFVGFLASYLFNVFVQGGAPGSFVSTFASFATPADLLLALF 227 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 KA + ++A ++G A + V VV+S+ +++I++ + + Y + Sbjct: 228 KAAAYGAIVAVIACQKGLAAHGGPTGVANSVNAAVVESVLLLMIVNVVVSQVYTML 283 >gi|54027027|ref|YP_121269.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54018535|dbj|BAD59905.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 287 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 39/247 (15%), Positives = 91/247 (36%), Gaps = 9/247 (3%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVIAQ 184 I+ A + K + ++R VG + VV+++ G + Sbjct: 33 QAITFFQALGAVPFVLKHYRKEVLRLTADVGWGNGSLVVGGGTIGVVVILCAFGGITVGM 92 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 + L+ + + RE+ +L + A ++G A++GSM+I+EEIDA+ Sbjct: 93 ESFNALNLLTMGPLTGAISGFATTRELAPILATLAFAIQAGCRFTAQLGSMRISEEIDAL 152 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 ++ + + L+S R+ A +++ L + +A + + + + F Sbjct: 153 ESIAIRPLPYLVSTRMIAATLTIVPLYTIGLATAYLATKLSVLFLGGTSAGTYDHYFFQF 212 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++F L+K + G+ +G + I +++ + Sbjct: 213 LIGTDVFFSLLKVVIFVLLATFIQCYYGYVATGGPEGVGVAAGRAIKMVIVVMVFANLFL 272 Query: 365 AIFYFAI 371 + + I Sbjct: 273 TLAIWGI 279 >gi|296167381|ref|ZP_06849783.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897325|gb|EFG76929.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 289 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 55/256 (21%), Positives = 109/256 (42%), Gaps = 10/256 (3%) Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 R+ F + +NL+ + G + ++D A + + G + ++ L LI Q Sbjct: 8 RARFPRAAENLNRY-GGAAGRGLDDVGQMAWFGAVAL---GHIPHALRNYRKETLRLIAQ 63 Query: 160 M------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 + V V +V ++ +++A QG L G E F+ +++ +R Sbjct: 64 IGMGTGAMAVIGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAAP 123 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 ++T + +A G+ AE+G+M+I+EEIDA+ MG+ + L + RI A ++ + L L Sbjct: 124 VVTGIAMAATVGAGATAELGAMRISEEIDALEVMGIKSISFLATTRIMAGLVVIIPLYAL 183 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 A + + I Y + F + ++F ++A + + I G+ Sbjct: 184 AMIMSFLSPQITTTVLYGQSNGTYEHYFRTFLRPDDVFWSFLEAIIITAVVMITHCFYGY 243 Query: 334 AVGVHSNSLGKKVTTC 349 G +G+ V Sbjct: 244 NAGGGPVGVGEAVGRS 259 >gi|120405065|ref|YP_954894.1| hypothetical protein Mvan_4111 [Mycobacterium vanbaalenii PYR-1] gi|119957883|gb|ABM14888.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 281 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 91/225 (40%), Gaps = 9/225 (4%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---------VPVVILISFVTGAVIAQ 184 + + Y + + ++R + + + + +V ++ TG +A Sbjct: 27 MALFYARAAAGVPYALRFYRRDILRLIAEISMGAGTLAMIGGTLVIVGFLTLATGGTLAV 86 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L G E + L + + +R ++ + +A G+ + A++G+M+ NEEIDA+ Sbjct: 87 QGYSSLGDIGIEALTGFLAAFINVRISAPVVAGIGLAATFGAGVTAQLGAMRTNEEIDAL 146 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M + + L+S R+ A ++++ L +A + + + ++ F + Sbjct: 147 EAMAIRPISFLVSTRLIAGMVAITPLYSVAVILSFLASRYTTVVLLGQSAGLYDHYFATF 206 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 + ++ +A MA AI ++ G+ +G Sbjct: 207 LSPIDLLWSFAQAVLMAVAILLIHTYFGYNATGGPAGVGVATGDA 251 >gi|108797097|ref|YP_637294.1| hypothetical protein Mmcs_0117 [Mycobacterium sp. MCS] gi|119866182|ref|YP_936134.1| hypothetical protein Mkms_0126 [Mycobacterium sp. KMS] gi|108767516|gb|ABG06238.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119692271|gb|ABL89344.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] Length = 296 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 52/248 (20%), Positives = 106/248 (42%), Gaps = 6/248 (2%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVP 169 K + S H+ V++ G + ++ +L LI ++ V V Sbjct: 27 KLVAAPSRGLDSVGHVAWFVVTAVGSIGHALRYYRKEVLRLIAEIGMGTGAMAVIGGTVA 86 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +V ++ G++IA QG L G E F+ +++ +R +++ +A G+ Sbjct: 87 IVGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALVNVRIAAPVVSGQALAATVGAGAT 146 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AE+G+M+I+EEIDA+ MG+ + L+S RI A I + L +A + + A + + Sbjct: 147 AELGAMRISEEIDALEVMGIKSISYLVSTRIMAGFIVIIPLYAMAIIMSFLSAQVTTTLF 206 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 Y + F + ++ ++A ++ + I G+ +G+ V Sbjct: 207 YGQSTGTYEHYFRTFLRPDDVAWSFVQAIIISIIVMINHCYYGYYASGGPVGVGEAVGRS 266 Query: 350 VVQSISIV 357 + S+ + Sbjct: 267 MRASLIAI 274 >gi|120406151|ref|YP_955980.1| hypothetical protein Mvan_5203 [Mycobacterium vanbaalenii PYR-1] gi|119958969|gb|ABM15974.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 280 Score = 146 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 53/266 (19%), Positives = 111/266 (41%), Gaps = 9/266 (3%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VG 164 + + + ++ QA G +++ + LI +M + Sbjct: 9 FRRLLRFFPRAVDTVGEQALFYGETFRYVPNALT---RYRKETIRLIAEMSMGTGALVMI 65 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V V ++ +G VIA QG L G E + L + L +R + ++ + +A Sbjct: 66 GGTVGVAAFMTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAGIALAATI 125 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 G+ A++G+M++ EEIDA+ +M + V L+S R+ A +I++ L L+ +A A Sbjct: 126 GAGATAQLGAMRVAEEIDAVESMAVHAVSYLVSTRLIAGLIAIVPLYALSVLAAFFAARF 185 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 ++ F++ +++ ++A M+ A+ +V G+ +G Sbjct: 186 TTVYINGQSAGLYDHYFNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGPVGVGI 245 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370 V V S+ +V+ I ++ + Sbjct: 246 AVGQAVRTSLIVVVTIVLFISLAVYG 271 >gi|167970513|ref|ZP_02552790.1| hypothetical integral membrane protein yrbE3B [Mycobacterium tuberculosis H37Ra] gi|215404241|ref|ZP_03416422.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis 02_1987] gi|215411647|ref|ZP_03420443.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis 94_M4241A] gi|215427324|ref|ZP_03425243.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis T92] gi|215430875|ref|ZP_03428794.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis EAS054] gi|215446168|ref|ZP_03432920.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis T85] gi|218753677|ref|ZP_03532473.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis GM 1503] gi|219557919|ref|ZP_03536995.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis T17] gi|254550985|ref|ZP_05141432.1| hypothetical protein Mtube_11071 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289447582|ref|ZP_06437326.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis CPHL_A] gi|298525459|ref|ZP_07012868.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|289420540|gb|EFD17741.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis CPHL_A] gi|298495253|gb|EFI30547.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length = 258 Score = 146 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 55/239 (23%), Positives = 100/239 (41%), Gaps = 6/239 (2%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVILISFVTGAVIAQQGA 187 + + ++G LL +I QM V V +V ++ TGA++A QG Sbjct: 7 FFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTGAIVAVQGY 66 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 Q + G E + + REI V +A G+ A +G+M+INEEIDA+ + Sbjct: 67 NQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINEEIDALEVI 126 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ + L S R+ A ++ L + +A + A + Y V+ F++ Sbjct: 127 GIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGVYDHYFNTFLRP 186 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 ++ ++ +A I +V G+A +G+ V V S+ + I + + Sbjct: 187 TDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASIAILVMTL 245 >gi|145222688|ref|YP_001133366.1| hypothetical protein Mflv_2100 [Mycobacterium gilvum PYR-GCK] gi|315443152|ref|YP_004076031.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|145215174|gb|ABP44578.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] gi|315261455|gb|ADT98196.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 284 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 57/250 (22%), Positives = 102/250 (40%), Gaps = 15/250 (6%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG-------- 167 + I N Q G + + + + L+RQ+ +G+ Sbjct: 18 RSIADPWNQVGVQTKFYGRTLRSIVIAVTR------YRIELVRQIAQMGLGAGALIVIGG 71 Query: 168 -VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 V +V ++ TGA++A QG S+ G E + + +R I TAV +A G+ Sbjct: 72 TVAIVGFLTVTTGALVAVQGYTDFSEIGVEALTGFASAFFNVRLIAPATTAVALAATIGA 131 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A++G+M+INEEIDA+ MG+ V L S R+ A ++ + L + ++ A Sbjct: 132 GATAQLGAMRINEEIDALEVMGIRSVAYLASTRVLAGLLVVIPLYCVGVLASFWAARFGT 191 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 Y V+ F + ++ + +A I +V GF+ +G+ V Sbjct: 192 TVIYGQSTGVYDHYFRTFLNPTDLVWSFAQCIVLAIVIMLVHTYYGFSARGGPAGVGEAV 251 Query: 347 TTCVVQSISI 356 V S+ + Sbjct: 252 GRAVRTSLIL 261 >gi|260186936|ref|ZP_05764410.1| hypothetical protein MtubCP_13018 [Mycobacterium tuberculosis CPHL_A] Length = 254 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 55/239 (23%), Positives = 100/239 (41%), Gaps = 6/239 (2%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVILISFVTGAVIAQQGA 187 + + ++G LL +I QM V V +V ++ TGA++A QG Sbjct: 3 FFVGTLAGIPDALMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTGAIVAVQGY 62 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 Q + G E + + REI V +A G+ A +G+M+INEEIDA+ + Sbjct: 63 NQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINEEIDALEVI 122 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ + L S R+ A ++ L + +A + A + Y V+ F++ Sbjct: 123 GIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGVYDHYFNTFLRP 182 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 ++ ++ +A I +V G+A +G+ V V S+ + I + + Sbjct: 183 TDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASIAILVMTL 241 >gi|226304400|ref|YP_002764358.1| YrbE family protein [Rhodococcus erythropolis PR4] gi|229494174|ref|ZP_04387937.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] gi|226183515|dbj|BAH31619.1| putative YrbE family protein [Rhodococcus erythropolis PR4] gi|229318536|gb|EEN84394.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] Length = 285 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 45/266 (16%), Positives = 109/266 (40%), Gaps = 10/266 (3%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYV---------GV 165 ++ + + + LG ++ AS + + ++ Q+ V G Sbjct: 11 RQASRPLRTAGDGLVSLGQHVTFYVRTIASIPFALTKYRKHVLGQISEVSFGTNSLLSGG 70 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 + +V +S ++ + L G S L ++ RE+ ++ A+ +A + G Sbjct: 71 GTIGIVFAMSLAAAMMLGVETHRGLELVGMTSLSGMLSAVANTRELAPVVVAIALAAKVG 130 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 + A+IG+M+I++EIDA+ +M + + L R+ A +I + + ++ ++ + +V Sbjct: 131 TGFTAQIGAMRISDEIDALDSMAIRSIPFLAGTRVIAAMICVIPIYMIGLLASYLSTRLV 190 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + + + FH + ++ +KA A + +V G+ +G+ Sbjct: 191 VVFFNGASAGTYDYFFHLAISPQDLLYSGLKAVVFAAVVALVHCAYGYYASGGPAGVGQA 250 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAI 371 + +I + I+D L + + Sbjct: 251 AGRALRTAILAIGILDVLMTFALWGL 276 >gi|289554258|ref|ZP_06443468.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis KZN 605] gi|289438890|gb|EFD21383.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis KZN 605] Length = 247 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 6/225 (2%) Query: 148 KFKGFLLSLIRQMYY------VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSID 201 ++G LL +I QM V V +V ++ TGA++A QG Q + G E + Sbjct: 10 HYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTGAIVAVQGYNQFASVGVEALTGF 69 Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261 + REI V +A G+ A +G+M+INEEIDA+ +G+ + L S R+ Sbjct: 70 ASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINEEIDALEVIGIRSISYLASTRVL 129 Query: 262 ALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMA 321 A ++ L + +A + A + Y V+ F++ ++ ++ +A Sbjct: 130 AGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGVYDHYFNTFLRPTDVLWSSVEVVVVA 189 Query: 322 CAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 I +V G+A +G+ V V S+ + I + + Sbjct: 190 LMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASIAILVMTL 234 >gi|145222147|ref|YP_001132825.1| hypothetical protein Mflv_1555 [Mycobacterium gilvum PYR-GCK] gi|315442586|ref|YP_004075465.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|145214633|gb|ABP44037.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] gi|315260889|gb|ADT97630.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 280 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 53/257 (20%), Positives = 109/257 (42%), Gaps = 9/257 (3%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVIL 173 + ++ QA G +++ + LI +M + V V Sbjct: 18 RAVDTVGEQALFYGETFRYVPNAIT---RYRKETIRLIAEMSMGTGALVMIGGTVGVAAF 74 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 ++ +G VIA QG L G E + L + L +R + ++ + +A G+ A++G Sbjct: 75 MTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAGIALAATIGAGATAQLG 134 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 +M++ EEIDA+ M + V L+S R+ A +I++ L L+ +A A Sbjct: 135 AMRVAEEIDAVEAMAVHAVSYLVSTRLIAGLIAIVPLYALSVLAAFFAARFTTVYINGQS 194 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 ++ F++ +++ ++A M+ A+ +V G+ +G V V S Sbjct: 195 AGLYDHYFNTFLVPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGPVGVGIAVGQAVRTS 254 Query: 354 ISIVIIIDSLFAIFYFA 370 + +V+ I + ++ + Sbjct: 255 LIVVVTIVLMISLAVYG 271 >gi|183982885|ref|YP_001851176.1| integral membrane protein, YrbE3B [Mycobacterium marinum M] gi|183176211|gb|ACC41321.1| conserved hypothetical integral membrane protein, YrbE3B [Mycobacterium marinum M] Length = 284 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 59/257 (22%), Positives = 106/257 (41%), Gaps = 9/257 (3%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVP 169 K +V+ N SQ ++ + ++ LL +I QM + V V Sbjct: 18 KSLVREWNRLGSQMRFYVTTLTGIPDAVMH---YRSELLRVIAQMGFGAGTLAVIGGTVV 74 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +V ++ TGA++A QG Q + G E + + REI V +A G+ Sbjct: 75 IVGFLAMTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGAT 134 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A++G+M+INEEIDA+ +G+ V L S R+ A ++ L + +A + A Sbjct: 135 AQLGAMRINEEIDALEVIGIRSVSYLASTRVLAGVVVAIPLFCVGLITAYLAARAGTTAI 194 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 Y V+ F++ ++ + +A I +V G+ +G+ V Sbjct: 195 YGQGSGVYDHYFNTFLRPTDVLWSSFEVVVVALMIMLVCTYYGYNAHGGPAGVGEAVGRA 254 Query: 350 VVQSISIVIIIDSLFAI 366 V S+ + I + + Sbjct: 255 VRASMVVASIAIVIMTL 271 >gi|15828392|ref|NP_302655.1| hypothetical protein ML2588 [Mycobacterium leprae TN] gi|221230869|ref|YP_002504285.1| hypothetical protein MLBr_02588 [Mycobacterium leprae Br4923] gi|13093822|emb|CAC32120.1| conserved membrane protein [Mycobacterium leprae] gi|219933976|emb|CAR72688.1| conserved membrane protein [Mycobacterium leprae Br4923] Length = 289 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 55/257 (21%), Positives = 110/257 (42%), Gaps = 12/257 (4%) Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 R+ F + NL+ + G + I+D + + G + +++ L LI Q Sbjct: 8 RARFPRAAANLNRY-GGAAARGIDDIGQMSWFG---LIALGNIPNALSRYRKETLRLIAQ 63 Query: 160 MYYVGVSGVPVVILISFVTGAV-------IAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 + +G + VV + + G V +A QG L G E F+ +++ +R Sbjct: 64 IG-MGTGAMAVVGGTAAIVGFVTLSGSSLVAIQGFASLGAIGVEAFTGFFAALINVRIAA 122 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 ++T +++A G+ AE+G+M+I+EEIDA+ M + + L++ RI A ++ + L Sbjct: 123 PVITGIVMAATVGAGATAELGAMRISEEIDALEVMSIKSISFLVTTRILAGLVVIVPLYA 182 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 +A A + I+ Y + F + ++F ++A + + I G Sbjct: 183 VAMIMAFLSPHIITTVLYGQSNGTYEHYFRTFLRPDDVFWSFLEAVIITAVVMITHCYYG 242 Query: 333 FAVGVHSNSLGKKVTTC 349 + +G+ V Sbjct: 243 YTANGGPVGVGEAVGRS 259 >gi|240168188|ref|ZP_04746847.1| hypothetical protein MkanA1_02657 [Mycobacterium kansasii ATCC 12478] Length = 272 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 56/266 (21%), Positives = 114/266 (42%), Gaps = 13/266 (4%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170 G V+ ++ + A + + G + +++ L LI Q+ +G + V Sbjct: 1 MNRYGGAAVRGLDTTGRLAWF---TLVSLGNVPFALSRYRKETLRLIAQIG-MGTGAMAV 56 Query: 171 VILISFVTGAV-------IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 V + + G V +A QG L G E F+ +++ +R ++T V +A Sbjct: 57 VGGTAAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAAPVVTGVAMAAT 116 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 G+ AE+G+M+I+EEIDA+ MG+ V L + RI A + + L +A A + Sbjct: 117 VGAGATAELGAMRISEEIDALEVMGIKSVCFLATTRILAGLTVIIPLYAMAMIMAFLSPQ 176 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 I Y + F + ++F ++A + + + G++ G +G Sbjct: 177 ITTTVLYGQSTGTYEHYFRTFLRPDDVFWSFLEAIIITAVVMVSHCYYGYSAGGGPVGVG 236 Query: 344 KKVTTCVVQSISIV--IIIDSLFAIF 367 + V + S+ + +++ + A++ Sbjct: 237 EAVGRSMRFSLVSIPVVVLSAALALY 262 >gi|118470891|ref|YP_884757.1| hypothetical protein MSMEG_0344 [Mycobacterium smegmatis str. MC2 155] gi|118172178|gb|ABK73074.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length = 256 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 51/239 (21%), Positives = 103/239 (43%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + T + + + + Q ++V + ++++ ++ Sbjct: 11 VGALGGFFAMTLDVFITIARPPFAWREYLNQTWFVARVSLVPALMLTVPYTVLLVFTFNI 70 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L +FGA FS +I + +IG ++T +++AG +A+ A++G+ I EE+DA+R MG Sbjct: 71 LLIEFGAADFSGTGAAIGTVSQIGPIVTVLVVAGAGSTAMCADLGARTIREELDAMRVMG 130 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 +D ++ L+ PR+ A L+ + G + +P F + A Sbjct: 131 IDPIQALVVPRVLAATTVALALSATVIIVGLAGGFVFAVFIQHVPPGSFVAGLTVLTHGA 190 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ L KA + G++A +G +VG +G V VV + + I+ + Sbjct: 191 DVAVALAKAALFGLSAGLIACYKGISVGGGPAGVGNAVNETVVFTFMALFAINVIATAV 249 >gi|120401161|ref|YP_950990.1| hypothetical protein Mvan_0133 [Mycobacterium vanbaalenii PYR-1] gi|119953979|gb|ABM10984.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 289 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 99/233 (42%), Gaps = 6/233 (2%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVPVVILISF 176 + H+ V++ G + ++ +L LI ++ V V +V ++ Sbjct: 27 RGLEAMGHVAVFVVTAVGSIGHALRFYRREMLRLIAEIGMGTGAMAVVGGTVAIVGFVTL 86 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 +++A QG L G E F+ +++ +R ++ +A G+ AE+G+M+ Sbjct: 87 SGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAAPVVAGQALAATVGAGATAELGAMR 146 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 I+EEIDA+ MG+ + L+S RI A + + L +A + + A + +Y Sbjct: 147 ISEEIDALEVMGIKSISYLVSTRIMAGFVVIIPLYAMAIIMSFLSAQVTTTVFYGQSVGT 206 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 + F + ++F I+A ++ + + GF +G+ V Sbjct: 207 YEHYFRTFLRPDDVFWSFIQAVIISVIVMLNHCYYGFYASGGPVGVGEAVGRS 259 >gi|296165084|ref|ZP_06847637.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899577|gb|EFG79030.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 289 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 51/235 (21%), Positives = 98/235 (41%), Gaps = 6/235 (2%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVPVVILISFVT 178 ++ +S G+ + ++++ LL ++ QM V +V I+ Sbjct: 29 LVEIGQMVWFALSAIGQIPFAVHRYRKELLRMVAQMGMGTGAMAVVGGTAAIVGFITLSA 88 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G+++A QG L G E F+ L +++ +R + + +A G+ AE+G+M+I+ Sbjct: 89 GSLVAIQGYATLGNIGVEAFTGFLAALVNVRFVAPVAAGQALAATVGAGATAELGAMRIS 148 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ M + V L S R+ A +I + L LA A + + Y + Sbjct: 149 EEIDALEVMSIRSVPFLASTRVVAGLIVIIPLYGLAMTMAFLSQQVTTVLLYGQSIGTYN 208 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 FH+ L ++ + +A + G+ +G+ V + S Sbjct: 209 HYFHTFLRLNDVGWSFAEVILVAVVVMTTHCYYGYTATGGPVGVGEAVGRSMRLS 263 >gi|118466059|ref|YP_881723.1| TrnB2 protein [Mycobacterium avium 104] gi|118167346|gb|ABK68243.1| TrnB2 protein [Mycobacterium avium 104] Length = 294 Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats. Identities = 64/290 (22%), Positives = 113/290 (38%), Gaps = 13/290 (4%) Query: 91 KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFK 150 +P ++V N SQ +S + A ++K Sbjct: 3 AAPARHRPMSVIPAPPRLARLSITLHRLVAGWNRLGSQTAFYVKALSLMWDAVA---RYK 59 Query: 151 GFLLSLIRQMYYVGVSGVPVVI-------LISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203 L LI M +GV + V+ + TG+ I Q LS G E S Sbjct: 60 AETLRLIATM-SLGVGALAVIGGTVVVVTTLVMSTGSFIGIQLYRSLSDVGVEALSGFAS 118 Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263 + L R L +A+ +A G+ A++G+M+INEEIDA+ MG+ + L S RI A Sbjct: 119 AYLNTRFAAPLTSAIGLAATIGAGATAQLGAMRINEEIDALEVMGIRAISYLASTRIVAG 178 Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323 ++ L L++ + + ++ + V+ F++ ++ L++ A Sbjct: 179 VLVTVPLWCLSSLAGYLATRTLVVVAFGQAPGVYDHYFNTYLQPTDLIWSLLQVMATATV 238 Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + +V GF +G+ V V S +V+ + A+ A G+ Sbjct: 239 VMLVHTYYGFNATGGPAGVGEAVGRSVRAS--LVVAVTVQLAVAMAAYGV 286 >gi|226304448|ref|YP_002764406.1| YrbE family protein [Rhodococcus erythropolis PR4] gi|229494442|ref|ZP_04388205.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] gi|226183563|dbj|BAH31667.1| putative YrbE family protein [Rhodococcus erythropolis PR4] gi|229318804|gb|EEN84662.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] Length = 283 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 48/236 (20%), Positives = 98/236 (41%), Gaps = 1/236 (0%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 + + + I + I + + A LG + + + + + Sbjct: 6 AGRFPRTRRQIGSISRSIDSIGDQALFFAKALGHAPKALMRYPRETLRLIAEISMGTGAL 65 Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 +G V +V ++ TG IA QG L G E + + + +R ++ + + Sbjct: 66 AVIG-GTVVIVGFLTLFTGGTIAVQGYSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGL 124 Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280 A G+ A++G+M+++EEIDA+ TM + + L+S R+ A +I++ L LA ++ + Sbjct: 125 AATIGAGSTAQLGAMRVSEEIDALETMAIPSIPYLVSTRVMAGMIAIIPLYSLAVIASFV 184 Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + Y+ V+ F + +I +A MA A+ ++ GF Sbjct: 185 ASRFATVFLYNQSGGVYDHYFTTFLIPTDILWSFAQAIVMALAVMLIHTYYGFNAT 240 >gi|111021669|ref|YP_704641.1| hypothetical protein RHA1_ro04697 [Rhodococcus jostii RHA1] gi|110821199|gb|ABG96483.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length = 283 Score = 141 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 48/236 (20%), Positives = 97/236 (41%), Gaps = 1/236 (0%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 + + + + I + + A +G + + + + + Sbjct: 6 AGRFPRTRKRFASASRSIDRLGEQALFFARAIGWAPRALMHYPKETLRLIAEISMGTGAL 65 Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 +G V +V ++ TG IA QG L G E + + + +R ++ + + Sbjct: 66 AVIG-GTVVIVGFLTLFTGGTIAVQGYSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGL 124 Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280 A G+ A++G+M+++EEIDA+ TM + + L+S R+ A +I++ L LA ++ + Sbjct: 125 AATIGAGSTAQLGAMRVSEEIDALETMAIPSIPYLVSTRVMAGMIAIIPLYALAVIASFM 184 Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + YD V+ F + +I +A MA AI ++ GF Sbjct: 185 ASRFATVVLYDQSSGVYDHYFSTFLIPTDILWSFAQAIVMAIAIMLIHTYYGFNAS 240 >gi|226364206|ref|YP_002781988.1| YrbE family protein [Rhodococcus opacus B4] gi|226242695|dbj|BAH53043.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 283 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 48/236 (20%), Positives = 97/236 (41%), Gaps = 1/236 (0%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 + + + + I + + A +G + + + + + Sbjct: 6 AGRFPRTRRRFASASRSIDRLGEQALFFARAIGSAPRALVHYRRETLRLIAEISMGTGAL 65 Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 +G V +V ++ TG IA QG L G E + + + +R ++ + + Sbjct: 66 AVIG-GTVVIVGFLTLFTGGTIAVQGYSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGL 124 Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280 A G+ A++G+M+++EEIDA+ TM + + L+S R+ A +I++ L LA ++ + Sbjct: 125 AATIGAGSTAQLGAMRVSEEIDALETMAIPSIPYLVSTRVMAGMIAIIPLYALAVIASFM 184 Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + YD V+ F + +I +A MA AI ++ GF Sbjct: 185 ASRFATVVLYDQSSGVYDHYFSTFLIPTDILWSFAQAIVMAIAIMLIHTYYGFNAS 240 >gi|118467026|ref|YP_884172.1| ABC transporter transmembrane protein [Mycobacterium avium 104] gi|118168313|gb|ABK69210.1| ABC transporter integral membrane protein [Mycobacterium avium 104] Length = 235 Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 43/219 (19%), Positives = 99/219 (45%) Query: 149 FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL 208 + +I Q + + +L++ GA++A Q + +++ GA + L Sbjct: 7 LRLPFGEVIVQAWTLLKVTALPAVLMAIPFGAMVAVQLSGLVNEVGANSLVGSATGVAVL 66 Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268 R+ + +++ G + SAI ++ G+ I EE+DA++T+G+D VR L+ PR L++ P Sbjct: 67 RQGAPVTAGLLMGGAAASAIASDFGARAIREELDALKTLGIDPVRRLVVPRFLGLLLITP 126 Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328 L ++ + A ++ + F+ F S A + +++ + K A + +++ Sbjct: 127 SLVVIVIAMGVGAAFVIATVVNGVTPGSFWLSFGSFAKMVDLWFTMGKGFIFAGIVAVIS 186 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + G + V VV ++ +++++ Sbjct: 187 SQRGMEAKGGPRGVADAVNASVVLNVIFIVVVNLAITQL 225 >gi|254819937|ref|ZP_05224938.1| TrnB2 protein [Mycobacterium intracellulare ATCC 13950] Length = 282 Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats. Identities = 62/265 (23%), Positives = 111/265 (41%), Gaps = 13/265 (4%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI--- 172 ++V N SQ +S + A ++K L LI M +G+ + ++ Sbjct: 16 HRLVAGWNRLGSQTAFYVKALSLVWDAVA---RYKAETLRLIATM-SLGIGALAIIGGTV 71 Query: 173 ----LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 + TGA I Q LS G E S + L R L +A+ +A G+ Sbjct: 72 VVVTTLVMSTGAFIGIQLYRSLSDVGVEALSGFASAYLNTRFAAPLTSAIGLAATIGAGA 131 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 A++G+M+INEEIDA+ MG+ + L S RI A ++ L L++ + + ++ Sbjct: 132 TAQLGAMRINEEIDALEVMGIRAISYLASTRIVAGVLVTVPLWCLSSLAGYLATRTLVVV 191 Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + V+ F++ ++ L++ A + +V GF +G+ V Sbjct: 192 AFGQAPGVYDHYFNTYLQPTDLIWSLLQVIATATVVMLVHTYYGFNATGGPAGVGEAVGR 251 Query: 349 CVVQSISIVIIIDSLFAIFYFAIGI 373 V S +V+ + A+ A G+ Sbjct: 252 SVRAS--LVVAVTVQLAVAMAAYGV 274 >gi|108797096|ref|YP_637293.1| hypothetical protein Mmcs_0116 [Mycobacterium sp. MCS] gi|119866181|ref|YP_936133.1| hypothetical protein Mkms_0125 [Mycobacterium sp. KMS] gi|126432719|ref|YP_001068410.1| hypothetical protein Mjls_0106 [Mycobacterium sp. JLS] gi|108767515|gb|ABG06237.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119692270|gb|ABL89343.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] gi|126232519|gb|ABN95919.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 265 Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats. Identities = 49/250 (19%), Positives = 102/250 (40%), Gaps = 4/250 (1%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + + TG+ ++++ F+L Q +++ + +S Sbjct: 12 VRDQVRPGLEAVGGFVRMCVLTGKALFRPFQWREFIL----QAWFLFRVSFLPTVAVSVP 67 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 +I L++FGA S ++ + ++G L+T +++AG +AI A++G+ I Sbjct: 68 LTVLIIFTLNILLAEFGAADVSGAGAALGAVTQLGPLVTVLVVAGAGSTAICADLGARTI 127 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EEIDA+ +G+D + L+ PR+ A LL ++G I ++ + Sbjct: 128 REEIDALEVLGIDPIHRLVVPRVVASTFVALLLNGAVITIGLVGGFIFGVYIQNVSAGAY 187 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 S L + ++KA G+V G VG + +G V +V + + Sbjct: 188 VSTLTLVTGLPEVLISVVKATTFGLIAGLVGCYRGLTVGGGAKGVGTGVNETLVLCVVAL 247 Query: 358 IIIDSLFAIF 367 ++ + Sbjct: 248 FAVNVVLTTI 257 >gi|119867718|ref|YP_937670.1| hypothetical protein Mkms_1677 [Mycobacterium sp. KMS] gi|120401521|ref|YP_951350.1| hypothetical protein Mvan_0499 [Mycobacterium vanbaalenii PYR-1] gi|126434219|ref|YP_001069910.1| hypothetical protein Mjls_1626 [Mycobacterium sp. JLS] gi|145221252|ref|YP_001131930.1| hypothetical protein Mflv_0653 [Mycobacterium gilvum PYR-GCK] gi|315441853|ref|YP_004074732.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|49072909|gb|AAT51760.1| TrnB2 [Mycobacterium vanbaalenii PYR-1] gi|119693807|gb|ABL90880.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] gi|119954339|gb|ABM11344.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] gi|126234019|gb|ABN97419.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] gi|145213738|gb|ABP43142.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] gi|315260156|gb|ADT96897.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 285 Score = 139 bits (350), Expect = 9e-31, Method: Composition-based stats. Identities = 58/258 (22%), Positives = 101/258 (39%), Gaps = 15/258 (5%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---------VPVVI 172 D QA G IS+T + + ++RQ+ +G+ V VV Sbjct: 25 WRDLGDQARFYGQSISSTVQAAT------TYRAEVLRQIAAIGLGAGSLAVVGGTVAVVA 78 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 ++ T A +A Q Q+SQ G E + + + +R +A A G+ A++ Sbjct: 79 FLNLSTSAALASQAYNQMSQVGVEALAGFTSAYVNVRLATPASSAFAFAATIGAGTTAQL 138 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 G+MKINEEIDA+ MG+ + L S R+ A +I + L +A + ++ +Y Sbjct: 139 GAMKINEEIDALAVMGIRPIAYLASTRLLAGVIVVVPLYCVALLMSFFSVRVITTAFYGQ 198 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 VF F + +F A I ++ G +G+ V Sbjct: 199 GSGVFDHYFDTFLNPQAVFFSFAVTVAAALVIMLIHTYYGLNATGGPAGVGEAVGRATRT 258 Query: 353 SISIVIIIDSLFAIFYFA 370 S+ ++ L + + Sbjct: 259 SLIASQMVILLVTLALYG 276 >gi|296171120|ref|ZP_06852573.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894376|gb|EFG74129.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 284 Score = 138 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 57/262 (21%), Positives = 107/262 (40%), Gaps = 11/262 (4%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPV 170 ++ N +Q ++ ++ ++ L+ QM V V + Sbjct: 19 RVAAGWNRVGAQVKFYATAVTEMRTAFL---RYWKEIIRLVAQMSLGTGALAVIGGTVVI 75 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 V ++ TGAVIA QG QLS G E + + + + +R I + V +A G+ A Sbjct: 76 VGFLTLSTGAVIAVQGYNQLSGIGVEAMTGFISAYVNVRIISPAVAGVGLAATIGAGATA 135 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 ++G+M+I +EIDA+ M + V L+S R+ A ++ + L +A A A Y Sbjct: 136 QLGAMRIADEIDALEVMAVRSVAYLVSTRVAAGVVVVIPLYCVAVVCAFQAARFGTTGIY 195 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 V+ F + ++ + A A+ +V G+ +G+ V V Sbjct: 196 GQSTGVYDHYFRTFLNSIDLLWSFVTVIAAAIAVMLVHTYYGYNASGGPAGVGRAVGHSV 255 Query: 351 VQSISIVIIIDSLFAIFYFAIG 372 S+ ++ +I + + G Sbjct: 256 RTSLIVLTLI--VLTVSLSVHG 275 >gi|296165199|ref|ZP_06847746.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899388|gb|EFG78847.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 258 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 49/194 (25%), Positives = 86/194 (44%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + F + +RQ ++ + V IL+S ++ Q A Q GA Sbjct: 38 VRTVQYFFFDLLTGRFQWQEFVRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGA 97 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 + + +R+ L+ AV++A GSAI A++GS + EE DA+ MG+ +R L Sbjct: 98 TSLAGAASGLAVIRQGASLVAAVLMASAVGSAITADLGSRTMREETDAMEVMGVSVIRRL 157 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PR+ A ++ LT + F+ + + + + F S F S AT +I L+ Sbjct: 158 VVPRLAAAVMIGVALTGVVCFAGFFASYMFNVYFQNGAPGSFVSTFASFATTGDIILALV 217 Query: 316 KAPFMACAIGIVAM 329 KA + +V+ Sbjct: 218 KAIVFGAIVAVVSS 231 >gi|296141463|ref|YP_003648706.1| hypothetical protein Tpau_3789 [Tsukamurella paurometabola DSM 20162] gi|296029597|gb|ADG80367.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM 20162] Length = 272 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 60/250 (24%), Positives = 109/250 (43%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170 Y + + + F + + L S K + I Q + Sbjct: 6 LYRLYQLVAIFTRSLATIGKSVVLARSIVTWTVRGIVKGNFAVAETITQAVTLLRVTTLP 65 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 IL++ GAV++ Q + GA I +R+ L T V++ G SAI A Sbjct: 66 AILVAVPFGAVVSVQVGALVDTVGANSLVGAASGIGIIRQGAPLATGVLLGGVCASAIAA 125 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 ++GS + EE+ A++ MG+D + LI+PR+ AL+I P+L + A++ A V + Sbjct: 126 DLGSRTVREELQAMQVMGVDPIARLIAPRMLALMIIAPMLLVAIVAVAMMVALTVSVWQF 185 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 + F+S F + + +++ ++KA A +G+VA G + V + V Sbjct: 186 GLSSGGFWSSFGAFSAPSDLAFAVLKAETGAMIVGLVAGLRGLEASGGPRGVADGVNSSV 245 Query: 351 VQSISIVIII 360 V SI+++ + Sbjct: 246 VLSITLIFLA 255 >gi|167946701|ref|ZP_02533775.1| hypothetical protein Epers_09188 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 258 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 113/259 (43%), Gaps = 2/259 (0%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + +G++ + ++ + V+ + + + I Q+ + G+ +P Sbjct: 1 MISLLGRRSLNYLLYIIDLVVFVMAVMRSWRN--RGGLFNRASRAASITQLIFSGIDALP 58 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 + +++ G + Q F FG E L++ L E G LLTA+++ GRSGSAI Sbjct: 59 TITILALAVGLSVTTQLIFAAQVFGQEADVASLLANLVALEFGSLLTAIVMIGRSGSAIA 118 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 ++G+M +N E++ + +G+D +SPR+ ++I+ +L I + +++ + Sbjct: 119 VDLGNMSLNREVEGLELLGIDVHAFFVSPRLIGMVIAQLVLAIYFSAFSLVTGITLAALL 178 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 + S ++ IK IG A +G +VG + + Sbjct: 179 ESTSNFKYLFAVVSAFEPLDLLLFFIKNLLFGLVIGANACLKGLSVGQSVTQVPQVTQKA 238 Query: 350 VVQSISIVIIIDSLFAIFY 368 +V S+ +V ++D +F + Sbjct: 239 IVNSLVMVFVLDGVFVLIL 257 >gi|324999496|ref|ZP_08120608.1| hypothetical protein PseP1_12046 [Pseudonocardia sp. P1] Length = 285 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 44/226 (19%), Positives = 92/226 (40%), Gaps = 1/226 (0%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 + + ++ Q + +++ + V G F + G ++ + S+ Sbjct: 51 PLALRLYPSEVLAQAGNLVRGSALIILFLIAVLALQSGVGGHFIFANPGINSYAGAIYSV 110 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 +R + ++ ++A + G IVAE+GSM+INEE+DA+ MGL L R+ A ++ Sbjct: 111 ALMRGLVEVIFGWIVAAKIGCGIVAEMGSMRINEEVDALDVMGLRSRAYLAGTRVAAAML 170 Query: 266 SLPLLTILANFSAIIGASIVIWKYYD-IPFAVFFSRFHSTATLANIFTGLIKAPFMACAI 324 LP L + A ++ + + F+ + L + T LI Sbjct: 171 VLPFLFVTALLVQFQAGYLMSVHGMNTVSEGAFYEYLYLFQNLRDFITALIWGSVTGVMC 230 Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 IVA G+ +G+ + ++ ++ + +FA ++ Sbjct: 231 VIVATFYGYNAKGGPVGVGESTARSMTVNLVLISALAVVFAQLFYG 276 >gi|325674885|ref|ZP_08154572.1| ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] gi|325554471|gb|EGD24146.1| ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] Length = 280 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 50/226 (22%), Positives = 96/226 (42%), Gaps = 9/226 (3%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPV 170 + + ++ QA + +K +L LI ++ V V + Sbjct: 15 RTSRSVDRVGEQALFFWRALVWAPRALVH---YKKEVLRLIAEISMGTGALAVIGGTVVI 71 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 V ++ TG IA QG L G E + + + +R ++ + +A G+ A Sbjct: 72 VGFLTLFTGGTIAVQGFSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGLAATIGAGSTA 131 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 ++G+M+++EEIDA+ +M + V L+S R+ A +I++ L LA ++ + + Y Sbjct: 132 QLGAMRVSEEIDALESMAIPSVPYLVSTRVMAGMIAIVPLYSLAVIASFVASRFATVFLY 191 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 D V+ F + +I +A MA A+ ++ GF Sbjct: 192 DQSPGVYDHYFSTFLNPTDILWSFAQAIAMALAVMLIHTYYGFNAS 237 >gi|41409701|ref|NP_962537.1| hypothetical protein MAP3603 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398533|gb|AAS06153.1| hypothetical protein MAP_3603 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 251 Score = 137 bits (346), Expect = 3e-30, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 91/218 (41%), Gaps = 6/218 (2%) Query: 138 NTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 + ++ L LI Q+ V V +V ++ +++A QG L Sbjct: 4 ALAHIPHALSHYRKETLRLIAQIGMGTGAMAVIGGTVAIVGFVTLSGSSLVAIQGFASLG 63 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 G E F+ +++ +R ++T + +A G+ AE+G+M+I+EEIDA+ MG+ Sbjct: 64 NIGVEAFTGFFAALINVRIAAPVVTGIAMAATVGAGATAELGAMRISEEIDALEVMGIKS 123 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 + L + RI A ++ + L LA + + I Y + F + ++F Sbjct: 124 ISFLATTRIMAGLVVIIPLYALAMIMSFLSPQITTTVLYGQSNGTYEHYFRTFLRPDDVF 183 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 ++A + + I G+ G +G+ V Sbjct: 184 WSFLEAIIITAVVMITHCFYGYNAGGGPVGVGEAVGRS 221 >gi|54023080|ref|YP_117322.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54014588|dbj|BAD55958.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 281 Score = 136 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 55/233 (23%), Positives = 107/233 (45%), Gaps = 4/233 (1%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 V G+ ++++ LL R V V+ VP + L++ G +++ Q + G Sbjct: 43 VTGTVGDLIRREFQWREALLQAWR---LVTVTAVPAI-LMAVPFGVIVSIQVGNLIHTLG 98 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 A+ + +++ + T ++ G +AI A++G+ I EEIDA+ TMG+ + Sbjct: 99 ADSLVGATGGLGVIKQGAPMATGFLLGGAGAAAIAADLGARTIREEIDALHTMGISPIHR 158 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L+ PR+ A++I PLL +L F ++ V D+ +++ F S + A+++ L Sbjct: 159 LVIPRMVAMLIVAPLLNVLVIFVGVLAGYAVAIGGQDVTPGSYWATFGSFTSTADVWVSL 218 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 KA + I+A + G + V VV S+ ++ ++ L Sbjct: 219 GKALIFGFLVVIIACQRGLEAKGGPRGVADAVNAAVVLSVVSIVCVNLLLTQV 271 >gi|312138209|ref|YP_004005545.1| integral membrane protein yrbe2b [Rhodococcus equi 103S] gi|311887548|emb|CBH46860.1| putative integral membrane protein YrbE2B [Rhodococcus equi 103S] Length = 283 Score = 136 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 50/226 (22%), Positives = 96/226 (42%), Gaps = 9/226 (3%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPV 170 + + ++ QA + +K +L LI ++ V V + Sbjct: 18 RTSRSVDRVGEQALFFWRALVWAPRALVH---YKKEVLRLIAEISMGTGALAVIGGTVVI 74 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 V ++ TG IA QG L G E + + + +R ++ + +A G+ A Sbjct: 75 VGFLTLFTGGTIAVQGFSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGLAATIGAGSTA 134 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 ++G+M+++EEIDA+ +M + V L+S R+ A +I++ L LA ++ + + Y Sbjct: 135 QLGAMRVSEEIDALESMAIPSVPYLVSTRVMAGMIAIVPLYSLAVIASFVASRFATVFLY 194 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 D V+ F + +I +A MA A+ ++ GF Sbjct: 195 DQSPGVYDHYFSTFLNPTDILWSFAQAIAMALAVMLIHTYYGFNAS 240 >gi|291614199|ref|YP_003524356.1| hypothetical protein Slit_1738 [Sideroxydans lithotrophicus ES-1] gi|291584311|gb|ADE11969.1| protein of unknown function DUF140 [Sideroxydans lithotrophicus ES-1] Length = 260 Score = 136 bits (343), Expect = 6e-30, Method: Composition-based stats. Identities = 50/224 (22%), Positives = 96/224 (42%), Gaps = 2/224 (0%) Query: 144 ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203 + RQ+++ GV + +V + ++GA++ Q + G ++ ++ Sbjct: 35 LRVLRIPPVNAVFHRQIFFTGVEALRIVAVFGLLSGALVITQITSLVG--GDSELTVKIL 92 Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263 +RE+G L A++I RS +AI +E+ MK E+ ++ MG+ L+ PRI + Sbjct: 93 IWTLVREVGPLFAAIIIIARSSAAIASELALMKTRHEMTSLYRMGIPPQDYLLVPRIAGV 152 Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323 +++ LTI AI G + + ++ + RF T L+ K A Sbjct: 153 TLAVLGLTIYFQVVAIGGGLAISAMFQNVSYLDQVGRFLQTVKLSEFAVVAFKGCLFGLA 212 Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 I ++ G + K V+QS+ V +D++ A Sbjct: 213 ISTISCYNGMQAQPSVTEVPKVAIKAVLQSLLFVFTLDAVIAYL 256 >gi|54022503|ref|YP_116745.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54014011|dbj|BAD55381.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 283 Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats. Identities = 47/224 (20%), Positives = 96/224 (42%), Gaps = 9/224 (4%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVP 169 +++ ++ A +++ ++ + LI ++ V V Sbjct: 17 RRMSDSLDSVGKHAVFYAQALASIPRALMH---YRTETIRLIAEISMGTGALAVIGGTVV 73 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +V ++ +G IA QG L G E + + L +R +++ + +A G+ Sbjct: 74 IVGFLTLFSGGTIAVQGYSSLGNIGVEALTGFFSAFLNVRIAAPVISGIGLAATIGAGST 133 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A++G+M+++EEIDA+ TM + V LI R+ A +I++ L LA ++ A Sbjct: 134 AQLGAMRVSEEIDALETMAIRPVPYLIGTRVLAGMIAIVPLYALAVIASFFAARFATVVI 193 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 Y V+ F + ++I +A MA A+ ++ G+ Sbjct: 194 YGQSAGVYDHYFSTFLIPSDILWSFSQAILMALAVMMIHTYYGY 237 >gi|240170712|ref|ZP_04749371.1| hypothetical protein MkanA1_15460 [Mycobacterium kansasii ATCC 12478] Length = 284 Score = 134 bits (339), Expect = 2e-29, Method: Composition-based stats. Identities = 65/274 (23%), Positives = 108/274 (39%), Gaps = 8/274 (2%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY-- 162 N IG + + + E + ++ +L LI QM Sbjct: 4 NPPAERLAWIGGRASGLVAGWNRVGIQVAFYARTIAEMRTAFGRYGKEILRLIAQMSLGT 63 Query: 163 ----VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 V V +V ++ TGAVIA QG QLS G E + + + + +R I + V Sbjct: 64 GALAVIGGTVVIVGFLTLSTGAVIAVQGYNQLSGIGVEAMTGFISAYVNVRIISPAVAGV 123 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 +A G+ A++G+M+I EEIDA+ M + V L+S R+ A ++ + L +A A Sbjct: 124 GLAATIGAGATAQLGAMRIAEEIDALEVMAVRSVAYLVSTRVVAGVVVVIPLYCIAVVCA 183 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 A Y V+ F + ++ + A AI +V G+ Sbjct: 184 FQAARFGTTGVYGQSTGVYDHYFRTFLNSTDLLWSFLTVIAAAIAIMLVHTHYGYTAKGG 243 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 +G V V S+ ++ +I + AI G Sbjct: 244 PAGVGAAVGHSVRTSLIVLTLI--VLAISLSVHG 275 >gi|169631232|ref|YP_001704881.1| hypothetical protein MAB_4154c [Mycobacterium abscessus ATCC 19977] gi|169243199|emb|CAM64227.1| Conserved hypothetical protein [Mycobacterium abscessus] Length = 286 Score = 134 bits (339), Expect = 2e-29, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 112/262 (42%), Gaps = 1/262 (0%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 +G+ KF + A L + + ++ + + + + +G V Sbjct: 17 RYMRGLGRSFDKFGEQALFYAQSLSYIPAALTKYRKETIRVLAEITMGTGALVMIG-GTV 75 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 V + ++ +G VIA QG L G E + L + L +R + ++ + +A G+ Sbjct: 76 GVAVFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVVAGIAMAATIGAGT 135 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 A++G+M++ EEIDA+ TM + + L+S R+ A +I++ L L+ +A + Sbjct: 136 TAQLGAMRVAEEIDALETMAVHAISYLVSTRLVAGLIAIIPLYSLSVLAAFFASRATTVM 195 Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 V+ F++ ++ ++A M+ + +V GF +G V Sbjct: 196 INGQSPGVYDHYFNTFLVPTDLLWSFLQAIVMSVVVMLVHTSYGFNASGGPVGVGVAVGQ 255 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 V S+ +V+++ ++ + Sbjct: 256 AVRTSLIVVVLVTLFISLAVYG 277 >gi|110348077|gb|ABG72766.1| YrbE1B-HA [Expression vector yrbE1AB] Length = 300 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 104/240 (43%), Gaps = 10/240 (4%) Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 R+ F + NL G + ++++ +++ G+ + ++ L LI Q Sbjct: 8 RARFPRAVANL-RQYGGAAARGLDEAGQLTWF---ALTSIGQIAHALRYYRKETLRLIAQ 63 Query: 160 M------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 + V V +V ++ +++A QG L G E F+ +++ +R G Sbjct: 64 IGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGP 123 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 ++T V +A G+ AE+G+M+I+EEIDA+ MG+ + L S RI A ++ + L L Sbjct: 124 VVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYAL 183 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 A + + I Y + F + ++F ++A + + + G+ Sbjct: 184 AMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYYGY 243 >gi|289752627|ref|ZP_06512005.1| integral membrane protein [Mycobacterium tuberculosis EAS054] gi|289693214|gb|EFD60643.1| integral membrane protein [Mycobacterium tuberculosis EAS054] Length = 295 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 100/255 (39%), Gaps = 9/255 (3%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 Y G + + + + A + + G +++ L L+ ++ Sbjct: 14 RARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALR---RYRRETLRLVAEI 70 Query: 161 ------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 V V ++ ++ G++IA QG L G E F+ ++ R + Sbjct: 71 GMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPI 130 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 ++ V +A G+ A++G+M+I+EEIDA+ MG+ + L+S RI ++ + L LA Sbjct: 131 VSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALA 190 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 A +V +Y + F + ++ +++ +A + I G+ Sbjct: 191 LDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYT 250 Query: 335 VGVHSNSLGKKVTTC 349 +G+ V Sbjct: 251 ASGGPVGVGQAVGRS 265 >gi|289552841|ref|ZP_06442051.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis KZN 605] gi|289437473|gb|EFD19966.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis KZN 605] Length = 294 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 100/255 (39%), Gaps = 9/255 (3%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 Y G + + + + A + + G +++ L L+ ++ Sbjct: 13 RARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALR---RYRRETLRLVAEI 69 Query: 161 ------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 V V ++ ++ G++IA QG L G E F+ ++ R + Sbjct: 70 GMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPI 129 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 ++ V +A G+ A++G+M+I+EEIDA+ MG+ + L+S RI ++ + L LA Sbjct: 130 VSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALA 189 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 A +V +Y + F + ++ +++ +A + I G+ Sbjct: 190 LDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYT 249 Query: 335 VGVHSNSLGKKVTTC 349 +G+ V Sbjct: 250 ASGGPVGVGQAVGRS 264 >gi|289441977|ref|ZP_06431721.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis T46] gi|289568521|ref|ZP_06448748.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis T17] gi|289749085|ref|ZP_06508463.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis T92] gi|289414896|gb|EFD12136.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis T46] gi|289542275|gb|EFD45923.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis T17] gi|289689672|gb|EFD57101.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis T92] Length = 295 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 100/255 (39%), Gaps = 9/255 (3%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 Y G + + + + A + + G +++ L L+ ++ Sbjct: 14 RARYPRTAASLDRYGGGTARRLERTGTFARFTRVSVVQIGWALR---RYRRETLRLVAEI 70 Query: 161 ------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 V V ++ ++ G++IA QG L G E F+ ++ R + Sbjct: 71 GMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPI 130 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 ++ V +A G+ A++G+M+I+EEIDA+ MG+ + L+S RI ++ + L LA Sbjct: 131 VSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALA 190 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 A +V +Y + F + ++ +++ +A + I G+ Sbjct: 191 LDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYT 250 Query: 335 VGVHSNSLGKKVTTC 349 +G+ V Sbjct: 251 ASGGPVGVGQAVGRS 265 >gi|289756667|ref|ZP_06516045.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|289712231|gb|EFD76243.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|326902420|gb|EGE49353.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis W-148] Length = 295 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 100/255 (39%), Gaps = 9/255 (3%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 Y G + + + + A + + G +++ L L+ ++ Sbjct: 14 RARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALR---RYRRETLRLVAEI 70 Query: 161 ------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 V V ++ ++ G++IA QG L G E F+ ++ R + Sbjct: 71 GMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVETFTGFFAALANTRVAAPI 130 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 ++ V +A G+ A++G+M+I+EEIDA+ MG+ + L+S RI ++ + L LA Sbjct: 131 VSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALA 190 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 A +V +Y + F + ++ +++ +A + I G+ Sbjct: 191 LDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYT 250 Query: 335 VGVHSNSLGKKVTTC 349 +G+ V Sbjct: 251 ASGGPVGVGQAVGRS 265 >gi|15607728|ref|NP_215102.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis H37Rv] gi|31791770|ref|NP_854263.1| integral membrane protein YrbE2b [Mycobacterium bovis AF2122/97] gi|121636506|ref|YP_976729.1| integral membrane protein YrbE2b [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660357|ref|YP_001281880.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis H37Ra] gi|148821790|ref|YP_001286544.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis F11] gi|224988978|ref|YP_002643665.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253797522|ref|YP_003030523.1| hypothetical protein TBMG_00595 [Mycobacterium tuberculosis KZN 1435] gi|289446141|ref|ZP_06435885.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis CPHL_A] gi|289573188|ref|ZP_06453415.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis K85] gi|289744302|ref|ZP_06503680.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis 02_1987] gi|289760707|ref|ZP_06520085.1| hypothetical integral membrane protein yrbE2B [Mycobacterium tuberculosis GM 1503] gi|298524075|ref|ZP_07011484.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308231594|ref|ZP_07413029.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu001] gi|308370001|ref|ZP_07419915.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu002] gi|308370453|ref|ZP_07421552.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu003] gi|308371712|ref|ZP_07425924.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu004] gi|308373528|ref|ZP_07432668.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu005] gi|308374049|ref|ZP_07434638.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu006] gi|308375204|ref|ZP_07443071.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu007] gi|308376450|ref|ZP_07438864.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu008] gi|308377469|ref|ZP_07479264.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu009] gi|308378677|ref|ZP_07483457.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu010] gi|308379821|ref|ZP_07487689.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu011] gi|308395898|ref|ZP_07492196.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu012] gi|2222770|emb|CAB09950.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE2B [Mycobacterium tuberculosis H37Rv] gi|31617357|emb|CAD93465.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE2B [Mycobacterium bovis AF2122/97] gi|121492153|emb|CAL70618.1| Conserved hypothetical integral membrane protein yrbE2B [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148504509|gb|ABQ72318.1| conserved hypothetical integral membrane protein YrbE2b [Mycobacterium tuberculosis H37Ra] gi|148720317|gb|ABR04942.1| hypothetical integral membrane protein yrbE2B [Mycobacterium tuberculosis F11] gi|224772091|dbj|BAH24897.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253319025|gb|ACT23628.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis KZN 1435] gi|289419099|gb|EFD16300.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis CPHL_A] gi|289537619|gb|EFD42197.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis K85] gi|289684830|gb|EFD52318.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis 02_1987] gi|289708213|gb|EFD72229.1| hypothetical integral membrane protein yrbE2B [Mycobacterium tuberculosis GM 1503] gi|298493869|gb|EFI29163.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308216591|gb|EFO75990.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu001] gi|308325672|gb|EFP14523.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu002] gi|308331898|gb|EFP20749.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu003] gi|308335685|gb|EFP24536.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu004] gi|308337264|gb|EFP26115.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu005] gi|308343189|gb|EFP32040.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu006] gi|308347056|gb|EFP35907.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu007] gi|308350999|gb|EFP39850.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu008] gi|308355633|gb|EFP44484.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu009] gi|308359588|gb|EFP48439.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu010] gi|308363516|gb|EFP52367.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu011] gi|308367197|gb|EFP56048.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu012] gi|328457305|gb|AEB02728.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis KZN 4207] Length = 295 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 100/255 (39%), Gaps = 9/255 (3%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 Y G + + + + A + + G +++ L L+ ++ Sbjct: 14 RARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALR---RYRRETLRLVAEI 70 Query: 161 ------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 V V ++ ++ G++IA QG L G E F+ ++ R + Sbjct: 71 GMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPI 130 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 ++ V +A G+ A++G+M+I+EEIDA+ MG+ + L+S RI ++ + L LA Sbjct: 131 VSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALA 190 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 A +V +Y + F + ++ +++ +A + I G+ Sbjct: 191 LDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYT 250 Query: 335 VGVHSNSLGKKVTTC 349 +G+ V Sbjct: 251 ASGGPVGVGQAVGRS 265 >gi|260203313|ref|ZP_05770804.1| hypothetical protein MtubK8_03240 [Mycobacterium tuberculosis K85] Length = 298 Score = 133 bits (336), Expect = 4e-29, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 106/256 (41%), Gaps = 10/256 (3%) Query: 84 LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFC 143 + + R+ F + NL G + ++++ +++ G+ Sbjct: 1 MCDSGRGADMSTAAVLRARFPRAVANL-RQYGGAAARGLDEAGQLTWF---ALTSIGQIA 56 Query: 144 ASSYKFKGFLLSLIRQM------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 + ++ L LI Q+ V V +V ++ +++A QG L G E Sbjct: 57 HALRYYRKETLRLIAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEA 116 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 F+ +++ +R G ++T V +A G+ AE+G+M+I+EEIDA+ MG+ + L S Sbjct: 117 FTGFFAALINVRIAGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLAS 176 Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 RI A ++ + L LA + + I Y + F + ++F ++A Sbjct: 177 TRIMAGLVVIIPLYALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPEDVFWSFLEA 236 Query: 318 PFMACAIGIVAMKEGF 333 + + + G+ Sbjct: 237 LIITAIVMVSHCYYGY 252 >gi|225712538|gb|ACO12115.1| UPF0393 membrane protein RBE_1340 [Lepeophtheirus salmonis] Length = 215 Score = 133 bits (336), Expect = 4e-29, Method: Composition-based stats. Identities = 40/193 (20%), Positives = 82/193 (42%), Gaps = 1/193 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G + + + K K + +I +MY +G+ +P V +S GA++ Q + + Sbjct: 7 VGKYTTLVYQALQPAEKKKVYYQQIIYEMYELGIKSIPFVAFVSIFVGAILTLQTSANIK 66 Query: 192 QFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 + + E + ++++AG+ GS I + IG+M++ E+IDA+ MG++ Sbjct: 67 NPLIPKYLVGFATRESIMVEFSPTIISLLLAGKIGSNIASGIGTMRVTEQIDALEIMGVN 126 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 LI P+I AL++ P + L+ + G + + F + Sbjct: 127 SAGYLIYPKIVALMLINPFIISLSIIIGVGGGWLAALMTGSTTYVQFIEGIQWDFNMMKY 186 Query: 311 FTGLIKAPFMACA 323 ++K A Sbjct: 187 IYAMVKTILFAFL 199 >gi|167970289|ref|ZP_02552566.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis H37Ra] gi|215406161|ref|ZP_03418342.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis 02_1987] gi|215425375|ref|ZP_03423294.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis T92] gi|215433088|ref|ZP_03431007.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis EAS054] gi|215448447|ref|ZP_03435199.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis T85] gi|218755902|ref|ZP_03534698.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis GM 1503] gi|219555966|ref|ZP_03535042.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis T17] gi|254549107|ref|ZP_05139554.1| hypothetical protein Mtube_01356 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185031|ref|ZP_05762505.1| hypothetical protein MtubCP_03117 [Mycobacterium tuberculosis CPHL_A] gi|260199171|ref|ZP_05766662.1| hypothetical protein MtubT4_03255 [Mycobacterium tuberculosis T46] gi|294994642|ref|ZP_06800333.1| hypothetical protein Mtub2_09022 [Mycobacterium tuberculosis 210] gi|297632646|ref|ZP_06950426.1| hypothetical protein MtubK4_00906 [Mycobacterium tuberculosis KZN 4207] gi|297729621|ref|ZP_06958739.1| hypothetical protein MtubKR_00936 [Mycobacterium tuberculosis KZN R506] gi|313656947|ref|ZP_07813827.1| hypothetical protein MtubKV_00921 [Mycobacterium tuberculosis KZN V2475] Length = 298 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 106/256 (41%), Gaps = 10/256 (3%) Query: 84 LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFC 143 + + R+ F + NL G + ++++ +++ G+ Sbjct: 1 MCDSGRGADMSTAAVLRARFPRAVANL-RQYGGAAARGLDEAGQLTWF---ALTSIGQIA 56 Query: 144 ASSYKFKGFLLSLIRQM------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 + ++ L LI Q+ V V +V ++ +++A QG L G E Sbjct: 57 HALRYYRKETLRLIAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEA 116 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 F+ +++ +R G ++T V +A G+ AE+G+M+I+EEIDA+ MG+ + L S Sbjct: 117 FTGFFAALINVRIAGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLAS 176 Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 RI A ++ + L LA + + I Y + F + ++F ++A Sbjct: 177 TRIMAGLVVIIPLYALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEA 236 Query: 318 PFMACAIGIVAMKEGF 333 + + + G+ Sbjct: 237 LIITAIVMVSHCYYGY 252 >gi|118618293|ref|YP_906625.1| integral membrane protein, Yrb3B [Mycobacterium ulcerans Agy99] gi|118570403|gb|ABL05154.1| conserved hypothetical integral membrane protein, Yrb3B [Mycobacterium ulcerans Agy99] Length = 230 Score = 133 bits (335), Expect = 5e-29, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 85/201 (42%) Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 V +V + TGA++A QG Q + G E + + REI V +A G Sbjct: 17 GTVVIVGFLGMTTGAIVAVQGYNQFASVGVEALTGFASAFFNAREIQPGTVMVALAATVG 76 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 + A++G+M+INEEIDA+ +G+ V L S R+ A ++ L + +A + A Sbjct: 77 AGATAQLGAMRINEEIDALEVIGIRSVSYLASTRVLAGVVVAIPLFCVGLITAYLAARAG 136 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 Y V+ F++ ++ + +A I +V G+ +G+ Sbjct: 137 TTAIYGQGSGVYDHYFNTFLRPTDVLWSSFEVVVLALMIMLVCTYYGYNAHGGPAGVGEA 196 Query: 346 VTTCVVQSISIVIIIDSLFAI 366 V V S+ + I + + Sbjct: 197 VGRAVRASMVVASIAIVIMTL 217 >gi|15839990|ref|NP_335027.1| hypothetical protein MT0617 [Mycobacterium tuberculosis CDC1551] gi|254230928|ref|ZP_04924255.1| hypothetical integral membrane protein yrbE2B [Mycobacterium tuberculosis C] gi|254363546|ref|ZP_04979592.1| hypothetical integral membrane protein yrbE2B [Mycobacterium tuberculosis str. Haarlem] gi|13880132|gb|AAK44841.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|124599987|gb|EAY58997.1| hypothetical integral membrane protein yrbE2B [Mycobacterium tuberculosis C] gi|134149060|gb|EBA41105.1| hypothetical integral membrane protein yrbE2B [Mycobacterium tuberculosis str. Haarlem] gi|323720940|gb|EGB30005.1| hypothetical protein TMMG_03291 [Mycobacterium tuberculosis CDC1551A] Length = 295 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 101/255 (39%), Gaps = 9/255 (3%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 Y G + + + + A + + G +++ L L+ ++ Sbjct: 14 RARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALR---RYRRETLRLVAEI 70 Query: 161 ------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 V V ++ ++ G++IA QG L G E F+ ++ R + Sbjct: 71 GMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPI 130 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 ++ V +A G+ A++G+M+I+EEIDA+ MG+ + L+S RI ++ + L LA Sbjct: 131 VSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALA 190 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 A +V +Y + F + ++ +++ +A + I+ G+ Sbjct: 191 LDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMIIHCYYGYT 250 Query: 335 VGVHSNSLGKKVTTC 349 +G+ V Sbjct: 251 ASGGPVGVGQAVGRS 265 >gi|108761681|ref|YP_632089.1| hypothetical protein MXAN_3909 [Myxococcus xanthus DK 1622] gi|108465561|gb|ABF90746.1| putative membrane protein [Myxococcus xanthus DK 1622] Length = 257 Score = 133 bits (334), Expect = 6e-29, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 114/261 (43%), Gaps = 9/261 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 L +G+ + + + + ++G + K L R + G +P Sbjct: 3 LLTRLGRTALDALRGTGALGLVVGRTVLAL---------PKLERRELGRALVQFGYGSLP 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 + + + + G ++ Q + +FGA F L E G LL ++++ R G+ Sbjct: 54 LALATAALAGIIVVLQSGIYVQRFGARAFLGWAAGYGVLWEFGPLLLGLIMSARLGARNA 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AE+ M++ +I+ +R +GLD IL++PR+ A+ +S+ L+ + AI+ S+ Sbjct: 114 AELALMQVGGQIEGLRGIGLDPFAILVAPRVVAMEVSMLALSGVTFAVAILFESVAALLA 173 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 +P VFF F ++ G++K AI +++ G + ++++G+ Sbjct: 174 LGLPVRVFFGTFSQLLGPLDLLGGVVKTGIFGLAIALLSTTVGLSARGGAHAVGQAAANA 233 Query: 350 VVQSISIVIIIDSLFAIFYFA 370 VV+S + + ++D Sbjct: 234 VVRSCAAIFVLDFALTSLLAG 254 >gi|215414033|ref|ZP_03422692.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis 94_M4241A] Length = 298 Score = 133 bits (334), Expect = 6e-29, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 106/256 (41%), Gaps = 10/256 (3%) Query: 84 LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFC 143 + + R+ F + NL G + ++++ +++ G+ Sbjct: 1 MCDSGRGADMSTAAVLRARFPRAVANL-RQYGVAAARGLDEAGQLTWF---ALTSIGQIA 56 Query: 144 ASSYKFKGFLLSLIRQM------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 + ++ L LI Q+ V V +V ++ +++A QG L G E Sbjct: 57 HALRYYRKETLRLIAQIGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEA 116 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 F+ +++ +R G ++T V +A G+ AE+G+M+I+EEIDA+ MG+ + L S Sbjct: 117 FTGFFAALINVRIAGPVVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLAS 176 Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 RI A ++ + L LA + + I Y + F + ++F ++A Sbjct: 177 TRIMAGLVVIIPLYALAMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEA 236 Query: 318 PFMACAIGIVAMKEGF 333 + + + G+ Sbjct: 237 LIITAIVMVSHCYYGY 252 >gi|296165592|ref|ZP_06848117.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899065|gb|EFG78546.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 318 Score = 133 bits (334), Expect = 6e-29, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 107/261 (40%), Gaps = 8/261 (3%) Query: 89 HRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS--------QAHILGLVISNTG 140 HR + + ++ + G + K + + + + + Sbjct: 22 HRGALHRAPFGNGAAPDGWRAVLTQPGASVAKAASRVGAIPARSTATTGRAVLMAAAVLR 81 Query: 141 EFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSI 200 + + + LI Q + + +L++ GA+IA Q + +++ GA Sbjct: 82 YAVLDTISMRLPVGELIVQAWTLLKVTAVPAVLMAVPFGAMIAVQVSGLVNEVGANSLIG 141 Query: 201 DLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRI 260 + + +R+ + +++ G + SAI A+ G+ I EE+DA+RT+G+D V+ L+ PR Sbjct: 142 SAIGVGVVRQGAPMTAGLLMGGAAASAIAADFGARAIREELDALRTLGIDPVQRLVVPRF 201 Query: 261 WALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320 AL++ P+L + S + A + D+ F+ F S A + +++ + K Sbjct: 202 LALVLIAPILCTIVIASGVAAAFTISVTVNDVTPGSFWLSFGSFAKMVDVWFAMGKTVTF 261 Query: 321 ACAIGIVAMKEGFAVGVHSNS 341 A + I++ G Sbjct: 262 AAFVAIISSMRGMEAKGGPRG 282 >gi|262203810|ref|YP_003275018.1| hypothetical protein Gbro_3951 [Gordonia bronchialis DSM 43247] gi|262087157|gb|ACY23125.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247] Length = 283 Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 93/212 (43%), Gaps = 9/212 (4%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---------VPVVILISFVTGAVIAQ 184 + A + + +R + + + V VV ++ TG IA Sbjct: 29 QALFYWDSIVAIPRALRLYKKETLRLIAEISMGTGALAMIGGTVVVVGFLTLFTGGTIAV 88 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ G E + + + +R +++ + +A G+ A++G+M+++EEIDA+ Sbjct: 89 QGYSSLANIGVEALTGFFSAFINVRIAVPVISGIALAATIGAGATAQLGAMRVSEEIDAL 148 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 TM + + L+S RI A +I++ L LA+ ++ + + Y V+ F + Sbjct: 149 ETMAISSIPYLVSTRIVAGLIAIIPLYALASLASFLASRFATVFIYGQSPGVYDHYFDTF 208 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 ++I ++A MA A+ ++ GF Sbjct: 209 LIPSDILWSFVQAICMAVAVMLIHTYYGFNAS 240 >gi|289572748|ref|ZP_06452975.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis K85] gi|289537179|gb|EFD41757.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis K85] Length = 289 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 104/240 (43%), Gaps = 10/240 (4%) Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 R+ F + NL G + ++++ +++ G+ + ++ L LI Q Sbjct: 8 RARFPRAVANL-RQYGGAAARGLDEAGQLTWF---ALTSIGQIAHALRYYRKETLRLIAQ 63 Query: 160 M------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 + V V +V ++ +++A QG L G E F+ +++ +R G Sbjct: 64 IGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGP 123 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 ++T V +A G+ AE+G+M+I+EEIDA+ MG+ + L S RI A ++ + L L Sbjct: 124 VVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYAL 183 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 A + + I Y + F + ++F ++A + + + G+ Sbjct: 184 AMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPEDVFWSFLEALIITAIVMVSHCYYGY 243 >gi|15607309|ref|NP_214682.1| integral membrane protein YRBE1B [Mycobacterium tuberculosis H37Rv] gi|31791346|ref|NP_853839.1| integral membrane protein YRBE1B [Mycobacterium bovis AF2122/97] gi|121636080|ref|YP_976303.1| integral membrane protein YrbE1b [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148659932|ref|YP_001281455.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis H37Ra] gi|148821360|ref|YP_001286114.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis F11] gi|224988553|ref|YP_002643240.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253797090|ref|YP_003030091.1| hypothetical protein TBMG_00169 [Mycobacterium tuberculosis KZN 1435] gi|254233557|ref|ZP_04926883.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis C] gi|254366620|ref|ZP_04982664.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis str. Haarlem] gi|289441543|ref|ZP_06431287.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis T46] gi|289445699|ref|ZP_06435443.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis CPHL_A] gi|289552420|ref|ZP_06441630.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis KZN 605] gi|289568067|ref|ZP_06448294.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis T17] gi|289747935|ref|ZP_06507313.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis 02_1987] gi|289748644|ref|ZP_06508022.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis T92] gi|289756233|ref|ZP_06515611.1| integral membrane protein [Mycobacterium tuberculosis EAS054] gi|289760270|ref|ZP_06519648.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|289764284|ref|ZP_06523662.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis GM 1503] gi|306774258|ref|ZP_07412595.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu001] gi|306782790|ref|ZP_07421112.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu003] gi|306801753|ref|ZP_07438421.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu008] gi|307082301|ref|ZP_07491471.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu011] gi|308369322|ref|ZP_07417339.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu002] gi|308371608|ref|ZP_07425479.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu004] gi|308372825|ref|ZP_07430015.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu005] gi|308373908|ref|ZP_07434059.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu006] gi|308375089|ref|ZP_07442632.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu007] gi|308378565|ref|ZP_07483021.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu009] gi|308379713|ref|ZP_07487253.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu010] gi|308394823|ref|ZP_07491759.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu012] gi|2213505|emb|CAB09751.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE1B [Mycobacterium tuberculosis H37Rv] gi|31616931|emb|CAD93038.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE1B [Mycobacterium bovis AF2122/97] gi|121491727|emb|CAL70189.1| Conserved hypothetical integral membrane protein yrbE1B [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124603350|gb|EAY61625.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis C] gi|134152132|gb|EBA44177.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis str. Haarlem] gi|148504084|gb|ABQ71893.1| conserved hypothetical integral membrane protein YrbE1b [Mycobacterium tuberculosis H37Ra] gi|148719887|gb|ABR04512.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis F11] gi|224771666|dbj|BAH24472.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253318593|gb|ACT23196.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis KZN 1435] gi|289414462|gb|EFD11702.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis T46] gi|289418657|gb|EFD15858.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis CPHL_A] gi|289437052|gb|EFD19545.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis KZN 605] gi|289541820|gb|EFD45469.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis T17] gi|289688463|gb|EFD55951.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis 02_1987] gi|289689231|gb|EFD56660.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis T92] gi|289696820|gb|EFD64249.1| integral membrane protein [Mycobacterium tuberculosis EAS054] gi|289711790|gb|EFD75806.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis GM 1503] gi|289715834|gb|EFD79846.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|308217092|gb|EFO76491.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu001] gi|308328030|gb|EFP16881.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu002] gi|308332310|gb|EFP21161.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu003] gi|308336192|gb|EFP25043.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu004] gi|308339692|gb|EFP28543.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu005] gi|308343699|gb|EFP32550.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu006] gi|308347572|gb|EFP36423.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu007] gi|308351471|gb|EFP40322.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu008] gi|308352198|gb|EFP41049.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu009] gi|308356147|gb|EFP44998.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu010] gi|308360102|gb|EFP48953.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu011] gi|308367650|gb|EFP56501.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu012] gi|323717157|gb|EGB26366.1| hypothetical protein TMMG_00597 [Mycobacterium tuberculosis CDC1551A] gi|326905925|gb|EGE52858.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis W-148] gi|328456877|gb|AEB02300.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis KZN 4207] gi|328864230|gb|AEB53198.1| conserved integral membrane protein YRBE1B [Mycobacterium tuberculosis] Length = 289 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 104/240 (43%), Gaps = 10/240 (4%) Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 R+ F + NL G + ++++ +++ G+ + ++ L LI Q Sbjct: 8 RARFPRAVANL-RQYGGAAARGLDEAGQLTWF---ALTSIGQIAHALRYYRKETLRLIAQ 63 Query: 160 M------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 + V V +V ++ +++A QG L G E F+ +++ +R G Sbjct: 64 IGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGP 123 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 ++T V +A G+ AE+G+M+I+EEIDA+ MG+ + L S RI A ++ + L L Sbjct: 124 VVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYAL 183 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 A + + I Y + F + ++F ++A + + + G+ Sbjct: 184 AMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYYGY 243 >gi|251773083|gb|EES53637.1| probable ABC transporter, permease [Leptospirillum ferrodiazotrophum] Length = 146 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 66/138 (47%) Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 E+G M ++I+A+ MG+D V L++P+I A ++ LP+L+++ +F ++ V Sbjct: 1 ELGMMSTTQQIEALLVMGVDPVDRLVAPKILAGMVMLPVLSVVGDFLGVLAGLAVAMFGA 60 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 + +++S + T N+ G++K + + G + +G+ T V Sbjct: 61 HVAAPLYWSGVRTALTPPNLVNGIVKPFVFGFILVSIGCFYGLRTTGGAQGVGRATTKAV 120 Query: 351 VQSISIVIIIDSLFAIFY 368 V + ++I + L + Sbjct: 121 VYAAIWILIANFLISKLL 138 >gi|168702230|ref|ZP_02734507.1| hypothetical protein GobsU_22062 [Gemmata obscuriglobus UQM 2246] Length = 256 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 51/231 (22%), Positives = 103/231 (44%), Gaps = 2/231 (0%) Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 ++ + LG + + T +S+ +R Y V + G+P+ ++ G VI Sbjct: 3 EAINFLERLGRLAAFTPRAVLASFTTLRRSGLWLRPFYSVTIGGLPLALVTGLALGVVIW 62 Query: 184 QQGAFQLSQFG--AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 L++ G A + ++ L E+ + +++A R+G+++ AE+ SM+++E+I Sbjct: 63 MHTRDVLARTGTGAVEYLPTFLAAAVLLELAPVGAGLIVAARTGASLGAELASMRVSEQI 122 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ +G+ +R L+ PRI A + + PLL +L +A+ I F + + Sbjct: 123 DAMELLGVSTIRALVGPRIVACVFAAPLLHVLIAATALGSGFIAELATGSTTFLKYNTAA 182 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 L ++ +K +G+ G + S +G+ T VV Sbjct: 183 VRELVLQDVIPAGLKTLVFGLIVGVTGCFAGLSAREGSEGVGRAATDSVVA 233 >gi|298527560|ref|ZP_07014969.1| YrbE1B-HA [Mycobacterium tuberculosis 94_M4241A] gi|298497354|gb|EFI32648.1| YrbE1B-HA [Mycobacterium tuberculosis 94_M4241A] Length = 289 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 104/240 (43%), Gaps = 10/240 (4%) Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 R+ F + NL G + ++++ +++ G+ + ++ L LI Q Sbjct: 8 RARFPRAVANL-RQYGVAAARGLDEAGQLTWF---ALTSIGQIAHALRYYRKETLRLIAQ 63 Query: 160 M------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 + V V +V ++ +++A QG L G E F+ +++ +R G Sbjct: 64 IGMGTGAMAVVGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGP 123 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 ++T V +A G+ AE+G+M+I+EEIDA+ MG+ + L S RI A ++ + L L Sbjct: 124 VVTGVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYAL 183 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 A + + I Y + F + ++F ++A + + + G+ Sbjct: 184 AMIMSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYYGY 243 >gi|120401935|ref|YP_951764.1| hypothetical protein Mvan_0920 [Mycobacterium vanbaalenii PYR-1] gi|119954753|gb|ABM11758.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 255 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 103/251 (41%), Gaps = 4/251 (1%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 F + + + ++ F I QM++V + +++S Sbjct: 3 ATESFARPMRAVGGFFATAVDTAVLAPQPPFAWREF----IFQMWFVARVSIFPTVMLSI 58 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 + L +FGA FS + + +IG L+T +++AG + +A+ A++G+ Sbjct: 59 PFTVLSVFIFNILLVEFGAADFSGAGAAFGAVTQIGPLVTVLVVAGAAATAMCADLGART 118 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 I EE+DA+R MG++ ++ L+ PR+ A ++ LL + + ++G + Sbjct: 119 IREELDAMRVMGINPLQALVVPRVLATVVVALLLNSVVSVVGVVGGFFFSVFVQHVTPGA 178 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 F + L I L KA ++ +G +VG +G V VV S Sbjct: 179 FVAGMTLFTGLPEIIISLTKASLFGLVAALIGCYKGISVGGGPVGVGTAVNETVVFSFMA 238 Query: 357 VIIIDSLFAIF 367 + +I+ + Sbjct: 239 LFVINVVVTAV 249 >gi|41410181|ref|NP_963017.1| hypothetical protein MAP4083 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41399015|gb|AAS06633.1| hypothetical protein MAP_4083 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 292 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 95/255 (37%), Gaps = 9/255 (3%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 Y G V+ + A + I TG ++ L L+ ++ Sbjct: 11 RARYPRTAANLDRYGGGTVRRLWQIGIFARFARISIGQTGWALRH---YRRETLRLVAEI 67 Query: 161 ------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 V V ++ ++ G++IA QG L G E F+ ++ R + Sbjct: 68 GMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRIAAPI 127 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 + V +A G+ A++G+M+I+EEIDA+ MG+ + L+S RI + + L LA Sbjct: 128 VAGVTLAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLAVIVPLYALA 187 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 A +V +Y + F + ++ + + +A + I G+ Sbjct: 188 LDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVFEVVIIAVVVMITHCYYGYT 247 Query: 335 VGVHSNSLGKKVTTC 349 +G V Sbjct: 248 ASGGPVGVGHAVGRS 262 >gi|118467306|ref|YP_883683.1| hypothetical protein MAV_4552 [Mycobacterium avium 104] gi|118168593|gb|ABK69490.1| conserved hypothetical protein [Mycobacterium avium 104] Length = 292 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 94/255 (36%), Gaps = 9/255 (3%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 Y G V+ + A + I G ++ L L+ ++ Sbjct: 11 RARYPRTAANLDRYGGGTVRRLWQIGIFARFARISIGQIGWALRH---YRRETLRLVAEI 67 Query: 161 ------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 V V ++ ++ G++IA QG L G E F+ ++ R + Sbjct: 68 GMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRIAAPI 127 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 + V +A G+ A++G+M+I+EEIDA+ MG+ + L+S RI + + L LA Sbjct: 128 VAGVTLAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLAVIVPLYALA 187 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 A +V +Y + F + ++ + + +A + I G+ Sbjct: 188 LDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVFEVVIIAVVVMITHCYYGYT 247 Query: 335 VGVHSNSLGKKVTTC 349 +G V Sbjct: 248 ASGGPVGVGHAVGRS 262 >gi|254458766|ref|ZP_05072190.1| ABC transporter permease protein [Campylobacterales bacterium GD 1] gi|207084532|gb|EDZ61820.1| ABC transporter permease protein [Campylobacterales bacterium GD 1] Length = 262 Score = 129 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 108/265 (40%), Gaps = 4/265 (1%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 IG K + ++ L + + + + + + L +Q+Y+ V Sbjct: 2 VLRFIEGIGDKTISMMSSFYEALRFTSLCLLHMIQPSSYNPAMRMVLT---KQIYFTTVQ 58 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +P+ + ++ + G+VI +Q+ + ++ + E TA++I+ RSG+ Sbjct: 59 IIPLFMTMAILFGSVIIGVVIALATQYNLQDEIGSIIITFVIDEFSPFFTALLISLRSGA 118 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ EI M +N+E++ + +D + L PRI + +IS L+IL + I Sbjct: 119 AVNTEIAVMNVNKELNTLEKYKIDLIDYLFLPRIISGMISAVSLSILFAVIMLSSGYIFT 178 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 Y ++ F + S ++ LIK+ ++ + G ++ V Sbjct: 179 LFYMNMDFHTYKYILISAIEFKDLVVLLIKSMAFGFVTMLIPIYSGLKTTSAYTAIPVSV 238 Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371 +V+ + I+ + ++ ++ Sbjct: 239 LNGMVKLFIALFFIE-VLSLLLQSL 262 >gi|296163927|ref|ZP_06846563.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900708|gb|EFG80078.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 283 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 112/263 (42%), Gaps = 20/263 (7%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---------VPV 170 + ++ S A +G V+ G + K + ++R + +G+ V + Sbjct: 21 RALDASGDVALFVGEVLRYLG------FTLKNYRKEVLRLIAEIGMGTGAMAAVGGTVAI 74 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 + ++ G++IA QG L G E F+ ++ +R + ++T +A G+ A Sbjct: 75 IGFVTLSAGSLIAIQGFASLGNIGVEAFTGFFAALANVRVVAPIVTGTALAATVGAGATA 134 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 ++G+M+I+EEIDA+ MG+ V L+S R+ I L +A + A +V +Y Sbjct: 135 QLGAMRISEEIDALEVMGIKSVSYLVSTRVIGAFIVTIPLYSVAVLLSFFSAQLVTTLFY 194 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 + F++ + + + L + ++ + + G+ +G V + Sbjct: 195 AQSIGTYDHYFNTFLRVNDFWYSLAETVAISAVVMLNHCYYGYNASGGPVGVGVAVGRSM 254 Query: 351 VQSISIVIIIDSLFAIFYFAIGI 373 S+ ++++ + ++ I Sbjct: 255 RASLIAIVMV-----VLMASLAI 272 >gi|254776984|ref|ZP_05218500.1| hypothetical protein MaviaA2_20266 [Mycobacterium avium subsp. avium ATCC 25291] Length = 292 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 94/255 (36%), Gaps = 9/255 (3%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 Y G V+ + A + I G ++ L L+ ++ Sbjct: 11 RARYPRTAANLDRYGGGTVRRLWQIGVFARFARVSIGQIGWALRH---YRRETLRLVAEI 67 Query: 161 ------YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 V V ++ ++ G++IA QG L G E F+ ++ R + Sbjct: 68 GMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRIAAPI 127 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 + V +A G+ A++G+M+I+EEIDA+ MG+ + L+S RI + + L LA Sbjct: 128 VAGVTLAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLAVIVPLYALA 187 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 A +V +Y + F + ++ + + +A + I G+ Sbjct: 188 LDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWAVFEVVIIAVVVMITHCYYGYT 247 Query: 335 VGVHSNSLGKKVTTC 349 +G V Sbjct: 248 ASGGPVGVGHAVGRS 262 >gi|319951382|ref|ZP_08025207.1| YrbE family protein [Dietzia cinnamea P4] gi|319434979|gb|EFV90274.1| YrbE family protein [Dietzia cinnamea P4] Length = 187 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 39/174 (22%), Positives = 80/174 (45%) Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 G E + + + +R ++ + +A G+ A++G+M+++EEIDA+ M +D + Sbjct: 1 MGVEALTGFFAAFINVRIAAPVIAGIGLAATIGAGATAQLGAMRVSEEIDALEVMAIDSI 60 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 L+S RI A +I++ L LA ++ + + + Y V+ F + +I Sbjct: 61 TYLVSTRIVAGMIAVVPLYSLAVIASFLASRFATVEIYGQSGGVYDHYFSTFLIPTDILW 120 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 ++A MA I ++ G+ +G V V S+ V+ + L ++ Sbjct: 121 SFVQAIAMAITIMLIHTYYGYNAAGGPAGVGSAVGNAVRTSLIAVVTVTLLVSL 174 >gi|215444701|ref|ZP_03431453.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis T85] gi|294996100|ref|ZP_06801791.1| hypothetical protein Mtub2_16770 [Mycobacterium tuberculosis 210] Length = 246 Score = 127 bits (320), Expect = 3e-27, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 90/212 (42%), Gaps = 9/212 (4%) Query: 147 YKFKGFLLSLIRQMYYVGVSG---------VPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 + + + +R + +G+ V ++ ++ G++IA QG L G E Sbjct: 5 WALRRYRRETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVET 64 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 F+ ++ R +++ V +A G+ A++G+M+I+EEIDA+ MG+ + L+S Sbjct: 65 FTGFFAALANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVS 124 Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 RI ++ + L LA A +V +Y + F + ++ +++ Sbjct: 125 TRILGGLVVIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEV 184 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 +A + I G+ +G+ V Sbjct: 185 VIIAVVVMITHCYYGYTASGGPVGVGQAVGRS 216 >gi|167969011|ref|ZP_02551288.1| hypothetical integral membrane protein yrbE2B [Mycobacterium tuberculosis H37Ra] gi|215402356|ref|ZP_03414537.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis 02_1987] gi|215410129|ref|ZP_03418937.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis 94_M4241A] gi|215425820|ref|ZP_03423739.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis T92] gi|215429421|ref|ZP_03427340.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis EAS054] gi|218752228|ref|ZP_03531024.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis GM 1503] gi|219556430|ref|ZP_03535506.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis T17] gi|254549543|ref|ZP_05139990.1| hypothetical protein Mtube_03620 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185465|ref|ZP_05762939.1| hypothetical protein MtubCP_05439 [Mycobacterium tuberculosis CPHL_A] gi|260199593|ref|ZP_05767084.1| hypothetical protein MtubT4_05539 [Mycobacterium tuberculosis T46] gi|260203752|ref|ZP_05771243.1| hypothetical protein MtubK8_05504 [Mycobacterium tuberculosis K85] gi|297633082|ref|ZP_06950862.1| hypothetical protein MtubK4_03110 [Mycobacterium tuberculosis KZN 4207] gi|297730060|ref|ZP_06959178.1| hypothetical protein MtubKR_03155 [Mycobacterium tuberculosis KZN R506] gi|313657387|ref|ZP_07814267.1| hypothetical protein MtubKV_03145 [Mycobacterium tuberculosis KZN V2475] Length = 246 Score = 127 bits (320), Expect = 3e-27, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 90/212 (42%), Gaps = 9/212 (4%) Query: 147 YKFKGFLLSLIRQMYYVGVSG---------VPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 + + + +R + +G+ V ++ ++ G++IA QG L G E Sbjct: 5 WALRRYRRETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEA 64 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 F+ ++ R +++ V +A G+ A++G+M+I+EEIDA+ MG+ + L+S Sbjct: 65 FTGFFAALANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVS 124 Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 RI ++ + L LA A +V +Y + F + ++ +++ Sbjct: 125 TRILGGLVVIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEV 184 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 +A + I G+ +G+ V Sbjct: 185 VIIAVVVMITHCYYGYTASGGPVGVGQAVGRS 216 >gi|31747666|gb|AAO38315.1| Lfe134p2 [Leptospirillum ferrooxidans] Length = 138 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 34/138 (24%), Positives = 69/138 (50%) Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 +G+M++ E+IDA ++ ++ L++PR++A + +LPLLT LA+ I G V Sbjct: 1 LGTMRVTEQIDAFTSLAVNPQTYLMTPRVFAGLTALPLLTALADLVGIAGGYFVAVILLG 60 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 +P + L + ++GL+K+ + +++ GF + +G+ VT VV Sbjct: 61 LPHNSYVRGIAEYVNLHDFYSGLVKSAVFGGLLSLLSCHMGFYASGGAAGVGRSVTVAVV 120 Query: 352 QSISIVIIIDSLFAIFYF 369 S +++ D + + Sbjct: 121 ASSMAILVSDYFLTSWLY 138 >gi|270595146|ref|ZP_06221505.1| conserved hypothetical protein [Haemophilus influenzae HK1212] gi|270318343|gb|EFA29500.1| conserved hypothetical protein [Haemophilus influenzae HK1212] Length = 133 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 46/132 (34%), Positives = 78/132 (59%) Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198 + + L++QM+ +GV + +++L G V+ QG L F AE Sbjct: 2 LFGALIGKPQIRKHFPLLVKQMHVLGVQSLLIILLSGLFIGMVLGLQGYVVLVDFSAETS 61 Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258 L+++ LRE+G ++TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+P Sbjct: 62 JGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAP 121 Query: 259 RIWALIISLPLL 270 R WA +IS+P+L Sbjct: 122 RFWAGVISMPIL 133 >gi|85860837|ref|YP_463039.1| ABC transporter permease [Syntrophus aciditrophicus SB] gi|85723928|gb|ABC78871.1| ABC transporter permease protein [Syntrophus aciditrophicus SB] Length = 269 Score = 126 bits (318), Expect = 5e-27, Method: Composition-based stats. Identities = 53/271 (19%), Positives = 109/271 (40%), Gaps = 4/271 (1%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 F S IG K + + I + + + K ++ Q+ Sbjct: 3 PFGRKSMVTFIEGIGTKALVVARSVINTLFFAWRAIVHLADRKTYNNATKMV---IVTQL 59 Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 Y+ V +P+ I IS + G + + G + +++ + E+ +T +M+ Sbjct: 60 YFTAVQILPLFISISVILGLFLMGIVFESIKNLGMTGYLGNILMGFIVTELCPFMTVLML 119 Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280 A RSG+AI EI MK+N+E DA+ +D + PRI ++S+ LL + + Sbjct: 120 ALRSGAAINTEIAVMKVNKEFDALSVFNIDIFDYIYVPRILNGVVSVVLLNGVFTLVLLT 179 Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 +I + I + S ++A ++ L+K I ++ ++ G Sbjct: 180 SGAIFSRVIFGIGMDAYISILITSAEFPDLVILLLKCATFGFFITLLPIRYGLTASNELT 239 Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 S+ V ++ ++II+ + ++ +I Sbjct: 240 SIPIAVLNGMINVFIAIVIIE-VISLILSSI 269 >gi|326383098|ref|ZP_08204787.1| hypothetical protein SCNU_09176 [Gordonia neofelifaecis NRRL B-59395] gi|326198234|gb|EGD55419.1| hypothetical protein SCNU_09176 [Gordonia neofelifaecis NRRL B-59395] Length = 283 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 90/212 (42%), Gaps = 9/212 (4%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---------VPVVILISFVTGAVIAQ 184 + + + + +R + + + V VV ++ TG IA Sbjct: 29 QALFYWDAIASIPRAIRLYKKETLRLIAEISMGTGALAMIGGTVVVVGFLTLFTGGTIAV 88 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ G E + + + +R ++ + +A G+ A++G+M+++EEIDA+ Sbjct: 89 QGYSSLANIGVEALTGFFSAFINVRIAVPVIAGIALAATIGAGATAQLGAMRVSEEIDAL 148 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M + V L+S RI A ++++ L LA ++ + + Y V+ F + Sbjct: 149 EVMAISSVPYLVSTRIVAGLVAIIPLYSLAALASFLASRFATVVLYGQSSGVYDHYFSTF 208 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 ++I ++A MA A+ ++ GF Sbjct: 209 LIPSDILWSFVQAICMAVAVMLIHTYYGFNAS 240 >gi|213027514|ref|ZP_03341961.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 152 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 44/148 (29%), Positives = 76/148 (51%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++I+ Sbjct: 5 ALAALGHSGIKTVRTFGRAGLMLFNAIIGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGV 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALI 264 E++ ++ M +D +R +ISPR WA + Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGV 152 >gi|291279860|ref|YP_003496695.1| ABC transporter permease [Deferribacter desulfuricans SSM1] gi|290754562|dbj|BAI80939.1| ABC transporter, permease [Deferribacter desulfuricans SSM1] Length = 258 Score = 126 bits (316), Expect = 7e-27, Method: Composition-based stats. Identities = 52/230 (22%), Positives = 101/230 (43%), Gaps = 3/230 (1%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 KN +G +V F + ++ + +F + K +RQ+Y+ GV Sbjct: 1 MKNFIESLGSYVVGFFLFLQNYIIFSLQILKSLFKFNLFN---KAIFSVYLRQVYFTGVQ 57 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +P+ I IS + G + + L G L+ +L +RE+G L+T ++++ RS + Sbjct: 58 ILPIYIFISLIFGIALVGILSKLLIDLGIYNELGKLLVLLIVRELGPLVTVILLSLRSST 117 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEI MK++ EI+ + +D + L PR+ A + + L+I +F +I G ++I Sbjct: 118 AVGAEISVMKLSGEIETLTFFEIDPLIYLFLPRVLAGLTCMVSLSIFFSFVSITGGYLLI 177 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 I F ++++I K + + + +V Sbjct: 178 SFKLGITFDYLMKLIFDYISISDIAAFFYKTIMFGFFLMSIPIFSALSVK 227 >gi|260426504|ref|ZP_05780483.1| membrane protein [Citreicella sp. SE45] gi|260420996|gb|EEX14247.1| membrane protein [Citreicella sp. SE45] Length = 137 Score = 123 bits (309), Expect = 5e-26, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 59/137 (43%) Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 MK+ E+IDA+ T+ + ++ L++PR+ A ++ +PLL + + I G V Sbjct: 1 MKVTEQIDALVTLSTNPMKYLVAPRLLAGLVVVPLLVGVGDVIGIFGGWFVATSSLGFNP 60 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 A + ++ + L+K ++ G G + +G+ V + Sbjct: 61 AAYLKNTLDFLEPLDVISSLVKGCAFGGIAALMGCYHGMHSGRGAQGVGRATKGSVEAAA 120 Query: 355 SIVIIIDSLFAIFYFAI 371 +++ + L +F+I Sbjct: 121 VLILAANFLLTGVFFSI 137 >gi|260188552|ref|ZP_05766026.1| hypothetical protein MtubCP_21372 [Mycobacterium tuberculosis CPHL_A] gi|289449202|ref|ZP_06438946.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis CPHL_A] gi|289422160|gb|EFD19361.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis CPHL_A] Length = 280 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 114/262 (43%), Gaps = 9/262 (3%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VG 164 ++ + +++ QA G + +++ + L+ +M + Sbjct: 9 FRRFFSRLQRPVDNFGEQALFYGETMRYVPNAIT---RYRKETVRLVAEMTLGAGALVMI 65 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V V ++ +G VIA QG L G E + L + L +R + ++ + +A Sbjct: 66 GGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATI 125 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 G+ A++G+M+++EEIDA+ M + V L+S R+ A ++++ L L+ +A A Sbjct: 126 GAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARF 185 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 ++ F++ +++ ++A M+ A+ +V G+ S +G Sbjct: 186 TTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVGV 245 Query: 345 KVTTCVVQSISIVIIIDSLFAI 366 V V S+ +V++I ++ Sbjct: 246 AVGQAVRTSLIVVVVITLFISL 267 >gi|15610636|ref|NP_218017.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis H37Rv] gi|15843112|ref|NP_338149.1| hypothetical protein MT3604 [Mycobacterium tuberculosis CDC1551] gi|31794676|ref|NP_857169.1| integral membrane protein YrbE4b [Mycobacterium bovis AF2122/97] gi|121639419|ref|YP_979643.1| integral membrane protein YrbE4b [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148663364|ref|YP_001284887.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis H37Ra] gi|148824707|ref|YP_001289461.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis F11] gi|215405541|ref|ZP_03417722.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis 02_1987] gi|215413413|ref|ZP_03422097.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis 94_M4241A] gi|215429006|ref|ZP_03426925.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis T92] gi|215432468|ref|ZP_03430387.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis EAS054] gi|215447833|ref|ZP_03434585.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis T85] gi|218755277|ref|ZP_03534073.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis GM 1503] gi|224991915|ref|YP_002646604.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253800542|ref|YP_003033543.1| hypothetical protein TBMG_03545 [Mycobacterium tuberculosis KZN 1435] gi|254234086|ref|ZP_04927411.1| hypothetical integral membrane protein yrbE4B [Mycobacterium tuberculosis C] gi|254366846|ref|ZP_04982887.1| hypothetical integral membrane protein yrbE4B [Mycobacterium tuberculosis str. Haarlem] gi|254552602|ref|ZP_05143049.1| hypothetical protein Mtube_19500 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260206867|ref|ZP_05774358.1| hypothetical protein MtubK8_21501 [Mycobacterium tuberculosis K85] gi|289555766|ref|ZP_06444976.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis KZN 605] gi|289576234|ref|ZP_06456461.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis K85] gi|289747336|ref|ZP_06506714.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis 02_1987] gi|289752221|ref|ZP_06511599.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis T92] gi|289755630|ref|ZP_06515008.1| integral membrane protein [Mycobacterium tuberculosis EAS054] gi|289759659|ref|ZP_06519037.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|289763680|ref|ZP_06523058.1| hypothetical integral membrane protein yrbE4B [Mycobacterium tuberculosis GM 1503] gi|294995730|ref|ZP_06801421.1| hypothetical protein Mtub2_14798 [Mycobacterium tuberculosis 210] gi|297636156|ref|ZP_06953936.1| hypothetical protein MtubK4_18620 [Mycobacterium tuberculosis KZN 4207] gi|297733156|ref|ZP_06962274.1| hypothetical protein MtubKR_18790 [Mycobacterium tuberculosis KZN R506] gi|298526980|ref|ZP_07014389.1| ABC-transporter integral membrane protein [Mycobacterium tuberculosis 94_M4241A] gi|306777850|ref|ZP_07416187.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu001] gi|306782581|ref|ZP_07420918.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu002] gi|306786399|ref|ZP_07424721.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu003] gi|306790768|ref|ZP_07429090.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu004] gi|306795298|ref|ZP_07433600.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu005] gi|306799486|ref|ZP_07437788.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu006] gi|306805332|ref|ZP_07442000.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu008] gi|306809518|ref|ZP_07446186.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu007] gi|306969625|ref|ZP_07482286.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu009] gi|306973968|ref|ZP_07486629.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu010] gi|307081676|ref|ZP_07490846.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu011] gi|307086284|ref|ZP_07495397.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu012] gi|313660487|ref|ZP_07817367.1| hypothetical protein MtubKV_18785 [Mycobacterium tuberculosis KZN V2475] gi|2924437|emb|CAA17737.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE4B [Mycobacterium tuberculosis H37Rv] gi|13883458|gb|AAK47963.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|31620273|emb|CAD95716.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE4B [Mycobacterium bovis AF2122/97] gi|121495067|emb|CAL73553.1| Conserved hypothetical integral membrane protein yrbE4B [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124599615|gb|EAY58719.1| hypothetical integral membrane protein yrbE4B [Mycobacterium tuberculosis C] gi|134152355|gb|EBA44400.1| hypothetical integral membrane protein yrbE4B [Mycobacterium tuberculosis str. Haarlem] gi|148507516|gb|ABQ75325.1| conserved hypothetical integral membrane protein YrbE4b [Mycobacterium tuberculosis H37Ra] gi|148723234|gb|ABR07859.1| hypothetical integral membrane protein yrbE4B [Mycobacterium tuberculosis F11] gi|224775030|dbj|BAH27836.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253322045|gb|ACT26648.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis KZN 1435] gi|289440398|gb|EFD22891.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis KZN 605] gi|289540665|gb|EFD45243.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis K85] gi|289687864|gb|EFD55352.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis 02_1987] gi|289692808|gb|EFD60237.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis T92] gi|289696217|gb|EFD63646.1| integral membrane protein [Mycobacterium tuberculosis EAS054] gi|289711186|gb|EFD75202.1| hypothetical integral membrane protein yrbE4B [Mycobacterium tuberculosis GM 1503] gi|289715223|gb|EFD79235.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|298496774|gb|EFI32068.1| ABC-transporter integral membrane protein [Mycobacterium tuberculosis 94_M4241A] gi|308213830|gb|EFO73229.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu001] gi|308324771|gb|EFP13622.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu002] gi|308329035|gb|EFP17886.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu003] gi|308332874|gb|EFP21725.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu004] gi|308336457|gb|EFP25308.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu005] gi|308340335|gb|EFP29186.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu006] gi|308344190|gb|EFP33041.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu007] gi|308348120|gb|EFP36971.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu008] gi|308352884|gb|EFP41735.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu009] gi|308356697|gb|EFP45548.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu010] gi|308360651|gb|EFP49502.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu011] gi|308364268|gb|EFP53119.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu012] gi|323717842|gb|EGB27033.1| hypothetical protein TMMG_03674 [Mycobacterium tuberculosis CDC1551A] gi|326905342|gb|EGE52275.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis W-148] gi|328460273|gb|AEB05696.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis KZN 4207] gi|328864232|gb|AEB53199.1| conserved integral membrane protein YRBE4B [Mycobacterium tuberculosis] Length = 280 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 115/266 (43%), Gaps = 9/266 (3%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VG 164 ++ + +++ QA G + +++ + L+ +M + Sbjct: 9 FRRFFSRLQRPVDNFGEQALFYGETMRYVPNAIT---RYRKETVRLVAEMTLGAGALVMI 65 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V V ++ +G VIA QG L G E + L + L +R + ++ + +A Sbjct: 66 GGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATI 125 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 G+ A++G+M+++EEIDA+ M + V L+S R+ A ++++ L L+ +A A Sbjct: 126 GAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARF 185 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 ++ F++ +++ ++A M+ A+ +V G+ S +G Sbjct: 186 TTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVGV 245 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370 V V S+ +V++I ++ + Sbjct: 246 AVGQAVRTSLIVVVVITLFISLAVYG 271 >gi|126433442|ref|YP_001069133.1| hypothetical protein Mjls_0833 [Mycobacterium sp. JLS] gi|126233242|gb|ABN96642.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 297 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 46/234 (19%), Positives = 94/234 (40%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 L + + + + Q + + +L++ GA+ + ++Q Sbjct: 54 LFADVLRYVVTDAITMRLAVGEVFVQAWTLLKVTTMPALLMAIPIGAITTIVTSGLVNQL 113 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 GA + +R+ L +++ + S I A+ G+ I EE+DA+R MG+D VR Sbjct: 114 GATSLLGAAAGVGVIRQGAPLTAGLLMGAAAASTIAADFGARAIREELDAMRVMGVDPVR 173 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 L+ PR AL++ PLL I S A ++ D+ F+ F + + +++ Sbjct: 174 QLVVPRFLALLLISPLLCIFIVASGTASAFLMAVGASDVAPGSFWMSFGTFTKVVDVWFA 233 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + K + IV+ G + V + VV ++ +++ + Sbjct: 234 IAKTVVFGAIVAIVSSLRGMEAKGGPRGVADAVNSSVVVNVVLIVFANLAITQL 287 >gi|219559567|ref|ZP_03538643.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis T17] gi|260202679|ref|ZP_05770170.1| hypothetical protein MtubT4_21963 [Mycobacterium tuberculosis T46] gi|289445097|ref|ZP_06434841.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis T46] gi|289571733|ref|ZP_06451960.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis T17] gi|289418016|gb|EFD15256.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis T46] gi|289545487|gb|EFD49135.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis T17] Length = 280 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 114/266 (42%), Gaps = 9/266 (3%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VG 164 ++ + +++ QA G + +++ + L+ +M + Sbjct: 9 FRRFFSRLQRPVDNFGEQALFYGETMRYVPNAIT---RYRKETVRLVAEMTLGAGALVMI 65 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V V ++ +G VIA QG L G E L + L +R + ++ + +A Sbjct: 66 GGTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALIGFLSAFLNVRVVAPVIAGIALAATI 125 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 G+ A++G+M+++EEIDA+ M + V L+S R+ A ++++ L L+ +A A Sbjct: 126 GAGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARF 185 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 ++ F++ +++ ++A M+ A+ +V G+ S +G Sbjct: 186 TTVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVGV 245 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370 V V S+ +V++I ++ + Sbjct: 246 AVGQAVRTSLIVVVVITLFISLAVYG 271 >gi|167947559|ref|ZP_02534633.1| hypothetical protein Epers_13847 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 132 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 50/127 (39%), Positives = 82/127 (64%) Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 QL FGA+I+ +L+ + +RE+G ++TA+++AGR+GSA A++GSM++NEE+DA+RT G Sbjct: 6 QLQMFGAQIYVANLVGLGMVREMGAMMTAIIMAGRTGSAYAAQLGSMQVNEEVDALRTFG 65 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + + L+ PR +LI+ LPLL I ++ I+G IV DI + + L Sbjct: 66 ISPMEYLVLPRSLSLILMLPLLCIWSDVLGIVGGLIVAAALLDISLLHYLQQTQEAINLM 125 Query: 309 NIFTGLI 315 ++ TG+I Sbjct: 126 DVLTGMI 132 >gi|153846369|ref|ZP_01993858.1| ABC-type transport system, permease component [Vibrio parahaemolyticus AQ3810] gi|149744914|gb|EDM56276.1| ABC-type transport system, permease component [Vibrio parahaemolyticus AQ3810] Length = 220 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 7/205 (3%) Query: 78 IEQLFSLISFTHRKKIKNQKPQ-----RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHIL 132 +E+ L++ + R + P +G + + S + Sbjct: 17 LERAAVLVALSWRLSLAELVPPSNIENAPQIPRGEDGFFERVGNATREMLVYVGSVVRFI 76 Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 + + + ++ G VP+++LI F+ G +IA + Q Sbjct: 77 KECVLVFK--LGINRRKNVNWTTVSNIATRAGADAVPIILLIGFLMGVIIAFEIGLVAQQ 134 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 FGA +F D + I RE+G L+TA++ AGR+G+A AEIG+ K+NEEI+A+ T G+ V Sbjct: 135 FGAVLFVADGIGISMFRELGPLMTAIVFAGRTGAAFAAEIGTQKVNEEINALHTFGICPV 194 Query: 253 RILISPRIWALIISLPLLTILANFS 277 L+ PRI+A ++ LPLLT+LA+ Sbjct: 195 EFLVIPRIYASVLVLPLLTVLADII 219 >gi|224369539|ref|YP_002603703.1| ABC-type transport system involved in resitance to organic solvents, permease protein [Desulfobacterium autotrophicum HRM2] gi|223692256|gb|ACN15539.1| ABC-type transport system involved in resitance to organic solvents, permease protein [Desulfobacterium autotrophicum HRM2] Length = 278 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 46/276 (16%), Positives = 110/276 (39%), Gaps = 12/276 (4%) Query: 99 QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLL-SLI 157 +++ N L +GK F+ S A L + ++ + + Sbjct: 8 RKTGMGNPLWRLLGALGKSTTAFV----SMAVYLTALAFTILVQATKPRHWRRTVRKAFS 63 Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 RQ+ G+ + V L++ G ++ Q L + G + L ++ +RE+ LLT Sbjct: 64 RQLLETGIKTIIPVGLVALFIGVLVVMQAQLWLGKLGQTEWLGPLFVVVVVRELAPLLTN 123 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +++ ++GS + +E+ M ++ ++ + G+D + LI PR+ A ++S LT+L Sbjct: 124 LIMILQNGSKMTSELAGMTVSGKVRMLDAQGIDPLIYLILPRVTATVVSTFCLTLLFIVF 183 Query: 278 AIIGASIVIWKYY--DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 +++ + + + +F + ++ L+ ++ EG + Sbjct: 184 SLVSGYLFSFALGLRLLAPQIFLDQILRALQSRDLLNLLLTGMIPPLLTTVICCSEGLCL 243 Query: 336 GVHSNSLGKKV----TTCVVQSISIVIIIDSLFAIF 367 + ++ T V S+ ++ + S+ Sbjct: 244 SLTRATVPNATSLALTRSTV-SLFLISVTISVLTYL 278 >gi|207109506|ref|ZP_03243668.1| hypothetical protein HpylH_09844 [Helicobacter pylori HPKX_438_CA4C1] Length = 137 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 48/139 (34%), Positives = 79/139 (56%), Gaps = 2/139 (1%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + +GK IV+ N + + G+++ + + +F + L+ + G +P Sbjct: 1 MITKLGKSIVETYNTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLP 58 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V IL F+ G +A QGA QL GA + S+++ + L LREIG + +++AGRS S+ Sbjct: 59 VSILTVFIVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFT 118 Query: 230 AEIGSMKINEEIDAIRTMG 248 A+IG MKI EE+DA++TMG Sbjct: 119 AQIGVMKITEELDAMKTMG 137 >gi|237757027|ref|ZP_04585479.1| ABC-type transport system involved in resistance to organic solvents, permease component [Sulfurihydrogenibium yellowstonense SS-5] gi|237690807|gb|EEP59963.1| ABC-type transport system involved in resistance to organic solvents, permease component [Sulfurihydrogenibium yellowstonense SS-5] Length = 137 Score = 117 bits (294), Expect = 3e-24, Method: Composition-based stats. Identities = 44/135 (32%), Positives = 75/135 (55%), Gaps = 6/135 (4%) Query: 129 AHILGLVISNTGE----FCASSYKFKGF--LLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ++ +I +TG F + FK F + +++ M +GV+ P+++L F TG V+ Sbjct: 1 MGVINSLIEHTGNITIFFLRTLLSFKKFPKIKHILKYMEDIGVNAAPLIVLTGFFTGGVL 60 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + +F AE L+S+ RE+ +L A+++ RSGSAI A IG+M+I E+ID Sbjct: 61 VVETYPTFHKFNAEFLMGALVSLSLARELSPVLVALLVTARSGSAIAANIGTMRITEQID 120 Query: 243 AIRTMGLDFVRILIS 257 A+ M +D +R L+ Sbjct: 121 ALEVMAVDPMRYLVL 135 >gi|108757210|ref|YP_632090.1| hypothetical protein MXAN_3910 [Myxococcus xanthus DK 1622] gi|108461090|gb|ABF86275.1| putative membrane protein [Myxococcus xanthus DK 1622] Length = 248 Score = 116 bits (290), Expect = 8e-24, Method: Composition-based stats. Identities = 53/246 (21%), Positives = 106/246 (43%), Gaps = 3/246 (1%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 G + +S + + Q++ +G V +V+ GAV+ Sbjct: 3 GVLSFFGAPVVMLARTVRASTRDGVPWRESLAQLHELGGRSVWLVMSGMAFFGAVLVTIA 62 Query: 187 AFQLSQF-GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 Q +F G L +RE+G ++A++ A R+G+A AE+ +M +NE+++A+ Sbjct: 63 NSQARRFVGNVAVLGPAYFELLIRELGPAVSALLTASRAGAAHAAELSTMSVNEQVEALE 122 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 D L++PR++A ++ +PLL IL +A + A+ V + + F Sbjct: 123 MSAGDPYADLVAPRVFAGVMGVPLLCILGTIAATLSAAAVAQFAFGVDGRAFMD--PRYV 180 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 ++ L+KA I + A G + ++G+ T VV + ++ID + Sbjct: 181 DGWDLLAALLKAAGCGLYIPLAAAVAGLKARGGAEAVGEATTDGVVAASLGCLLIDLAVS 240 Query: 366 IFYFAI 371 + + + Sbjct: 241 LAFQLL 246 >gi|313673540|ref|YP_004051651.1| hypothetical protein Calni_1580 [Calditerrivibrio nitroreducens DSM 19672] gi|312940296|gb|ADR19488.1| protein of unknown function DUF140 [Calditerrivibrio nitroreducens DSM 19672] Length = 258 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 10/241 (4%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 YH+GK V V+S F + +RQ+Y+ GV Sbjct: 1 MVRTIYHLGKFFVDGFRVLKDYLLFCNKVLS---RFLTFKILNPAIFMVTLRQVYFTGVQ 57 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + VV++I+ + G + L GA + ++ +RE+ LTA++++ RS + Sbjct: 58 IIRVVVIIAIIFGLGLVGTLGKFLMNIGAYQKIGTIFVVVVIREVAPFLTALLLSLRSAT 117 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEI MK+ EI +I+ G+D L PRI+A ++ L ++ + +I ++ Sbjct: 118 AVGAEISMMKLGSEIRSIKIHGIDEYSYLFLPRIFAGMVCSFSLAVIFSAVSITIGYFLL 177 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 +I F S + +IF + K + + + S +GK Sbjct: 178 SFQLNITFDYMVSLIFDALNINDIFCFIYKTILFGFTLMTLPIF-------TSMGVGKAT 230 Query: 347 T 347 T Sbjct: 231 T 231 >gi|291287596|ref|YP_003504412.1| hypothetical protein Dacet_1692 [Denitrovibrio acetiphilus DSM 12809] gi|290884756|gb|ADD68456.1| protein of unknown function DUF140 [Denitrovibrio acetiphilus DSM 12809] Length = 258 Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats. Identities = 45/239 (18%), Positives = 98/239 (41%), Gaps = 3/239 (1%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 K + + +G+ + I + K L RQ+Y+ GV Sbjct: 1 MKQIIHRLGRWAIDNSVFYYGYLGFTRKFIKGCFNRHLLNPSVK---LVFFRQIYFTGVQ 57 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +P+ ++S V G + + QFGA+ D++ ++ ++ + ++ A+++ RS + Sbjct: 58 ILPMFSVVSIVIGLALVGGLTKFMVQFGAQDRVGDVLVLVTIKHLAPMVAAILLVLRSST 117 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEI MK+N EID +R++ ++ L PRI + I+ L + + +++G +++ Sbjct: 118 AVTAEIALMKMNNEIDTLRSLSINPFIYLYIPRIASGIVCTGALATIFVYISLLGGYMIL 177 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 +I F + L+K + + + + V + Sbjct: 178 SFNLNISFGFLMQTIFDAFNFKIVLVFLMKIVLLGYFLMSLPIFSALQVHNSVTEIPIA 236 >gi|207110315|ref|ZP_03244477.1| hypothetical protein HpylH_14585 [Helicobacter pylori HPKX_438_CA4C1] Length = 113 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 39/111 (35%), Positives = 59/111 (53%) Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H T + G Sbjct: 1 FLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLHDTVGWNHFLVG 60 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ F Sbjct: 61 IVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDACF 111 >gi|148823178|ref|YP_001287932.1| integral membrane protein YrbE3a [Mycobacterium tuberculosis F11] gi|148721705|gb|ABR06330.1| hypothetical integral membrane protein yrbE3A [Mycobacterium tuberculosis F11] Length = 141 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 59/133 (44%) Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 I EE+DA+R MG++ ++ L +PR+ A L + + +IGA + Sbjct: 2 RTIREELDALRVMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSA 61 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 + + + ++ +IKA G++A +G +VG +G+ V VV + Sbjct: 62 GAWVTGLTTLTHTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAF 121 Query: 355 SIVIIIDSLFAIF 367 ++ +I+ + Sbjct: 122 IVLFVINIVVTAV 134 >gi|167951062|ref|ZP_02538136.1| ABC-type toluene export protein [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 189 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 34/108 (31%), Positives = 64/108 (59%), Gaps = 4/108 (3%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 +++S + Y+ L +IRQ++++G + V+++ TG V+A Q L +F Sbjct: 4 MLLSALLSLFRAPYQ----LEPVIRQLHFIGARSMLVIVISGLFTGMVLALQFHNTLERF 59 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 G+ +++ LRE+G ++ A+M+ GR+GSA+ AEIG M+ +E+I Sbjct: 60 GSVDLLGSAVALALLRELGPVMAALMVVGRAGSAMCAEIGIMRTSEQI 107 >gi|68171321|ref|ZP_00544719.1| ABC transporter permease protein [Ehrlichia chaffeensis str. Sapulpa] gi|67999248|gb|EAM85900.1| ABC transporter permease protein [Ehrlichia chaffeensis str. Sapulpa] Length = 105 Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 40/104 (38%) Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI 324 +++P++ + A+ G IV ++ ++ GL+KA I Sbjct: 1 VAMPIVILCADLIGAYGGYIVGSYQLGYTSEMYIKGVIKFLHAKDVTLGLVKATVFGFII 60 Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + G+ + +G T VV S +I+ + + +FY Sbjct: 61 SFMGCYSGYYCSGGARGVGLATTYVVVVSSMFIILFNYIITVFY 104 >gi|58040452|ref|YP_192416.1| ABC transporter permease [Gluconobacter oxydans 621H] gi|58002866|gb|AAW61760.1| Putative ABC transport system permease protein [Gluconobacter oxydans 621H] Length = 274 Score = 102 bits (255), Expect = 9e-20, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 108/268 (40%), Gaps = 6/268 (2%) Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162 +++ H+G + + ++ + + + Q Sbjct: 9 RITMVRSMLVHLGYFSRTQMRFTLMMIGAGWGIMREATRLTTWRRTVRIEFWASLHQAVG 68 Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 G+ ++ + +TG I Q + L G + ++S + +REI +L V++ G Sbjct: 69 GGILS---TLVTAALTGFGIVAQTVYWLGFAGMAQMTGSILSTVLVREIAPVLVGVILLG 125 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 RSG ++ E+G++ ++ A+ MG+D + PR A+ IS L ++ + +A++ Sbjct: 126 RSGMLMLTELGTLTTGGQMRAMTGMGIDPFISFLLPRSLAMTISGFTLGVIFSMTALLVG 185 Query: 283 SIVIWK--YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 V +P F + S+ + F K F A+G+ + G V + Sbjct: 186 YAVCRVEDAITMPIWAFLDQVVSSVKPIDYFVIPAKFIFSGYAVGVCSCLSGMDVT-TED 244 Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFY 368 L + + + +++I+ +F++ + Sbjct: 245 DLSSMLPRGFARGMLSIMVINVVFSVCF 272 >gi|3123858|gb|AAC15953.1| hypothetical integral membrane protein [Campylobacter jejuni] Length = 133 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 32/98 (32%), Positives = 47/98 (47%) Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 + +I+G +V DI F F RF + +I GL KAP IG++A GF Sbjct: 1 VDAISILGGMVVAKINLDISFGEFLRRFREAVEMKHIIIGLAKAPIFGFLIGLIACFRGF 60 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 V + S+G T VV +I VI D+LF++ + Sbjct: 61 EVKNTTQSIGIYTTKSVVNAIFWVIAFDALFSVVLTIM 98 >gi|213023205|ref|ZP_03337652.1| hypothetical protein Salmonelentericaenterica_11695 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 105 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 1/104 (0%) Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGI 326 PLLTI+ I G S+V + I F+S + ++ LIK+ A + Sbjct: 1 PLLTIIFVAVGIWGGSLVGVSWKGIDAGFFWSAMQNAVDWRMDLVNCLIKSVVFAITVTW 60 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +A+ G+ S + + T VV + V+ +D + F Sbjct: 61 IALFNGYDAIPTSAGISRATTRTVVHASLAVLGLDFVLTALMFG 104 >gi|330994287|ref|ZP_08318215.1| Protein trigalactosyldiacylglycerol 1 [Gluconacetobacter sp. SXCC-1] gi|329758754|gb|EGG75270.1| Protein trigalactosyldiacylglycerol 1 [Gluconacetobacter sp. SXCC-1] Length = 300 Score = 100 bits (250), Expect = 4e-19, Method: Composition-based stats. Identities = 46/284 (16%), Positives = 103/284 (36%), Gaps = 20/284 (7%) Query: 90 RKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKF 149 + + + F IG+ + + + + + Sbjct: 24 AQPEPENRGRLIALLGRFAPWLAAIGRLTRHQVRFTLLLIGAGWGTLRESLRPNSWRRPV 83 Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209 K + +RQ+ G +++ + + G ++ Q A+ L G + ++ + +R Sbjct: 84 KYEFRATLRQVVSGGFLS---IVITATLAGLMVVSQAAYWLGYAGMAQMTGSILVSVLVR 140 Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 EI +L +++ GRSG + EIG M + E+ ++ G+D L+ PR +A + Sbjct: 141 EISPILVGIILMGRSGMLSLTEIGMMVLGGEVRGLQARGIDPFLALVMPRTFAFTLGGFT 200 Query: 270 LTILANFSAIIGASIVIWKYYDIPFA--VFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327 L ++ +++ +V I + FF + T + +K + +G+ Sbjct: 201 LGMIFAVVSLLMGFVVAHASGAITSSVWTFFFNVLAAMTTWDYLIIPLKFVLVGFFVGLG 260 Query: 328 AMKEGFAVGVH-------SNSLGKKVTTCVVQSISIVIIIDSLF 364 A G V + I +V++++ LF Sbjct: 261 ACISGLTVSSTDTMATIMPRGFARG--------IMLVLVVNILF 296 >gi|329114262|ref|ZP_08243024.1| ABC Transporter Permease Protein [Acetobacter pomorum DM001] gi|326696338|gb|EGE48017.1| ABC Transporter Permease Protein [Acetobacter pomorum DM001] Length = 298 Score = 99 bits (248), Expect = 6e-19, Method: Composition-based stats. Identities = 41/245 (16%), Positives = 95/245 (38%), Gaps = 5/245 (2%) Query: 94 KNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFL 153 ++ +R + + IG+ + + VI + A + Sbjct: 26 AHKPAKRVPLHEWIRRKLAWIGRLVRRQARFFLVVLGAGWGVIFESFRSHAWRRTVRYEF 85 Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 ++ + + GVS + +TG Q + L G + ++ + +REI Sbjct: 86 VTTMNNIIGGGVSA---SLFAGMLTGVAAVSQVIYWLGLTGLAKMTGSILVNVVIREIAP 142 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 +L +++ GR+G E+G + I ++ +++++G+D +L+ PR A ++ L IL Sbjct: 143 ILVGILLLGRNGMLSATELGLLTIGGQVRSMQSVGMDPFLLLVLPRTLAFTVAGFTLGIL 202 Query: 274 ANFSAIIGASIV--IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 + S++I ++ I P F + ++ + +K + +G+ Sbjct: 203 FSMSSLITGYVMSRISGVITNPIWTFLDDVAAAMSVTDYAIIPLKFIMVGFVVGLGGCLT 262 Query: 332 GFAVG 336 G Sbjct: 263 GLTAT 267 >gi|258541977|ref|YP_003187410.1| ABC transporter permease [Acetobacter pasteurianus IFO 3283-01] gi|256633055|dbj|BAH99030.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-01] gi|256636112|dbj|BAI02081.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-03] gi|256639167|dbj|BAI05129.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-07] gi|256642221|dbj|BAI08176.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-22] gi|256645276|dbj|BAI11224.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-26] gi|256648331|dbj|BAI14272.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-32] gi|256651384|dbj|BAI17318.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654375|dbj|BAI20302.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-12] Length = 299 Score = 99.2 bits (246), Expect = 9e-19, Method: Composition-based stats. Identities = 41/245 (16%), Positives = 95/245 (38%), Gaps = 5/245 (2%) Query: 94 KNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFL 153 ++ +R + + IG+ + + VI + A + Sbjct: 27 AHKPAKRIPVHEWIRRKLAWIGRLVRRQARFFLVVLGAGWGVIFESFRSHAWRRTVRYEF 86 Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 ++ + + GVS + +TG Q + L G + ++ + +REI Sbjct: 87 ITTMNSIIGGGVSA---SLFAGMLTGVAAVSQVIYWLGLTGLAKMTGSILVNVVIREIAP 143 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 +L +++ GR+G E+G + I ++ +++++G+D +L+ PR A ++ L IL Sbjct: 144 ILVGILLLGRNGMLSATELGLLTIGGQVRSMQSVGMDPFLMLVLPRTLAFTVAGFTLGIL 203 Query: 274 ANFSAIIGASIV--IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 + S++I ++ I P F + ++ + +K + +G+ Sbjct: 204 FSMSSLITGYVMSRISGVITNPIWTFLDDVAAAMSVTDYAVIPLKFIMVGFVVGLGGCLT 263 Query: 332 GFAVG 336 G Sbjct: 264 GLTAT 268 >gi|209545500|ref|YP_002277729.1| hypothetical protein Gdia_3388 [Gluconacetobacter diazotrophicus PAl 5] gi|209533177|gb|ACI53114.1| protein of unknown function DUF140 [Gluconacetobacter diazotrophicus PAl 5] Length = 296 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 45/232 (19%), Positives = 90/232 (38%), Gaps = 5/232 (2%) Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 IG+ + + + V+ + + + +RQ+ GV Sbjct: 36 RVLPPLARIGRLTRHQVRFALVLVGMGWGVLRESVRPNSWRRTVRDEFRLCLRQVVGGGV 95 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 + + + G + Q A+ L G + ++ + +REI +L +++ GRSG Sbjct: 96 LS---TLFTATLAGLTVVSQAAYWLGFAGMAQMTGSILVSVLVREIAPVLVGIILLGRSG 152 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 + EIG + + ++ A++ GLD +L+ PR +A + L IL A++ IV Sbjct: 153 MLTLTEIGMLTLGGQVRAMQAQGLDPFLLLVMPRTFAFTVGGFTLGILFATMALLMGFIV 212 Query: 286 IW--KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 + FFS + + + +K + +G+ A G V Sbjct: 213 THTAGVMSMSVWTFFSDVLTAMSAWDFLVIPLKFVLVGFFVGLGACITGLLV 264 >gi|162148733|ref|YP_001603194.1| putative ABC transport system permease [Gluconacetobacter diazotrophicus PAl 5] gi|161787310|emb|CAP56904.1| putative ABC transport system permease protein [Gluconacetobacter diazotrophicus PAl 5] Length = 296 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 45/232 (19%), Positives = 90/232 (38%), Gaps = 5/232 (2%) Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 IG+ + + + V+ + + + +RQ+ GV Sbjct: 36 RVLPPLARIGRLTRHQVRFALVLVGMGWGVLRESVRPNSWRRTVRDEFRLCLRQVVGGGV 95 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 + + + G + Q A+ L G + ++ + +REI +L +++ GRSG Sbjct: 96 LS---TLFTATLAGLTVVSQAAYWLGFAGMAQMTGSILVSVLVREIAPVLVGIILLGRSG 152 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 + EIG + + ++ A++ GLD +L+ PR +A + L IL A++ IV Sbjct: 153 MLTLTEIGMLTLGGQVRAMQAQGLDPFLLLVMPRTFAFTVGGFTLGILFATMALLMGFIV 212 Query: 286 IW--KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 + FFS + + + +K + +G+ A G V Sbjct: 213 THTAGVMSMSVWTFFSDVLTAMSAWDFLVIPLKFVLVGFFVGLGACITGLLV 264 >gi|74316998|ref|YP_314738.1| ABC-type transport system permease [Thiobacillus denitrificans ATCC 25259] gi|74056493|gb|AAZ96933.1| ABC-type transport system ipermease component [Thiobacillus denitrificans ATCC 25259] Length = 264 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 94/232 (40%), Gaps = 5/232 (2%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKF-KGFLLSLIRQMYYV 163 NS +G K+V + + LG G + + +++Q+Y+ Sbjct: 2 NSIAASLESLGAKVVGWFTVGYAMFSFLG----KAGLLLLERETWNRATFDVVVKQVYFT 57 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 V + V + + V +I FG F+ ++ + + E+ LTA+ +A R Sbjct: 58 AVQILHVFLGYALVISWLIITIILSTARDFGLTAFASEMTIRVLVLELLPFLTALFVALR 117 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 SGSAI E+ M++N E+DA+ + ++ PR+ ++S+ L LA A++ Sbjct: 118 SGSAINTEVALMQVNNELDALAHCKVPPMQFEFLPRLIGGVVSVVTLAGLAGLLALLLGY 177 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 + I+ F + + ++K+ A+ ++ + G Sbjct: 178 LAIYGAGTAGFEPYTQTIAKIFDFGILAGLVVKSALFGLAVTLIPVTAGLET 229 >gi|320102563|ref|YP_004178154.1| hypothetical protein Isop_1016 [Isosphaera pallida ATCC 43644] gi|319749845|gb|ADV61605.1| protein of unknown function DUF140 [Isosphaera pallida ATCC 43644] Length = 290 Score = 97.2 bits (241), Expect = 4e-18, Method: Composition-based stats. Identities = 34/250 (13%), Positives = 94/250 (37%), Gaps = 17/250 (6%) Query: 87 FTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASS 146 ++ + + P++ ++ + IG+ + I+ + + + T Sbjct: 9 RSNPSQPRRSLPRKGRGFDPLRRSLAAIGRGTLATISYLGALKLLTLATLRAT---IRPP 65 Query: 147 YKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206 ++ Q+ ++ G+P+ +L+ G +A Q + + A + ++ Sbjct: 66 RDAPPLRRAVSAQLAWMLSMGLPLTVLVHVSLGGFLAMQSYYGATFILA---TGPVVLTG 122 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 +R + ++ +++ G G+ AE+ A + + L + R WA +I+ Sbjct: 123 LIRNLSPVMAGLILVGMVGTRCTAEL----------ARQGFRISP-AYLTAARFWAAVIA 171 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326 P+L + + + + V +++ + +F ++ L+K A + Sbjct: 172 GPILGLAGTLTGSLAGAAVAYRWLGVSVQGYFEFGWEMVWFRDVVGLLVKGMLFGGATVL 231 Query: 327 VAMKEGFAVG 336 +A EG + Sbjct: 232 IAALEGLRIT 241 >gi|324999497|ref|ZP_08120609.1| hypothetical protein PseP1_12051 [Pseudonocardia sp. P1] Length = 263 Score = 96.9 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 45/239 (18%), Positives = 96/239 (40%) Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G+ F ++ G+ + + Y + F + +Q Sbjct: 17 GMAALLVTVFGSAIRNPVGYWRAAMLDFYTTVRRAALPMAAAIFGFLLFFSLVVVIFFNQ 76 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 GA L+ + R V + AV+++G +G+A+ A++G+ KI +E+DA+R MGLD V Sbjct: 77 VGAVSLGSALLFLYGFRAFTVFVVAVVVSGVAGAALTADLGARKIRDELDAMRVMGLDPV 136 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 R L+ PR+ ++++ L+ + + + I Y + ++ + + + Sbjct: 137 RELVVPRVVSMVVLTTLIVLPGLGVSAVALQIGASYYGHLAAVDYYDNLFAALVPLELGS 196 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 ++ + I IV +G S +G+ V VV + + + + + Sbjct: 197 VVLNCFLLGIMIAIVCCYKGLNASGGSIGVGRAVNQAVVICYVGLFVFQLAYNAVFLGL 255 >gi|218463600|ref|ZP_03503691.1| probable ABC transporter, permease protein [Rhizobium etli Kim 5] Length = 191 Score = 96.5 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 41/176 (23%), Positives = 78/176 (44%), Gaps = 11/176 (6%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEKY 65 R +GNW+S + + D +++ +S VDLS IT+IDT G L+ E Sbjct: 24 VRLSGNWRSAYVHLVLRDFEKLLHQ--KSGDLTVDLSDITDIDTAGIWLLCRLKKEAEAA 81 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 ++ +G + HI+++ ++ S K + + IGK ++ Sbjct: 82 GRTVRFEGTNPHIDEMLAMFSEEPAKPEPE----PREKISLAARILAPIGKMTYDVWDNL 137 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + +ILG + S++ Q+ ++GV VP+++L+SF+ GA+ Sbjct: 138 AAAMYILGSAVRGAQMKFGRGS--GVSPASIVNQIDHMGVRAVPIILLMSFLIGAI 191 >gi|291446775|ref|ZP_06586165.1| ABC-transporter integral membrane protein [Streptomyces roseosporus NRRL 15998] gi|291349722|gb|EFE76626.1| ABC-transporter integral membrane protein [Streptomyces roseosporus NRRL 15998] Length = 113 Score = 96.1 bits (238), Expect = 8e-18, Method: Composition-based stats. Identities = 30/98 (30%), Positives = 51/98 (52%) Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 +I+G GSAI A++GS KI EE+DA+ MG+ ++ L+ PR+ A ++ LL L + Sbjct: 16 VISGAPGSAICADLGSRKIREELDAMEVMGVSPIQRLVVPRVLATMLVAVLLNGLISVVG 75 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316 +G D + + F + A L +++ K Sbjct: 76 TLGGYFFNVIMQDGTPGAYLASFSALAQLPDLYISEFK 113 >gi|251771004|gb|EES51588.1| probable ABC transporter, permease protein [Leptospirillum ferrodiazotrophum] Length = 211 Score = 96.1 bits (238), Expect = 8e-18, Method: Composition-based stats. Identities = 45/205 (21%), Positives = 99/205 (48%) Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 G+S +P++ +++ + GA + + +L + G + ++ + +G TA+++ Sbjct: 3 AGLSALPIITVVALLVGAGVVAETGIELPKLGIQNLVGTIVLHVIFGIVGPFATALIVIA 62 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 RS S + EIG+M+++ E+D I +G++ ++I+P I +I+S LT A+ G Sbjct: 63 RSTSGLAVEIGNMRVSGELDTIEMLGVNLSYLIITPNIIGIIVSTIALTFYFGIIAMAGG 122 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 + +P A L+++ L++ F I V++ G V + + Sbjct: 123 FAMALMGLSMPVATLVRMIEMNIRLSDLLLPLLEGLFYGLIISSVSVYHGLRVKRSAREV 182 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIF 367 K+ +V ++++ + SL+ IF Sbjct: 183 PKETRLALVSALALSTVALSLYLIF 207 >gi|196229086|ref|ZP_03127952.1| ABC-type transport system involved in resistance to organic solvents permease component-like protein [Chthoniobacter flavus Ellin428] gi|196227367|gb|EDY21871.1| ABC-type transport system involved in resistance to organic solvents permease component-like protein [Chthoniobacter flavus Ellin428] Length = 261 Score = 95.7 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 52/246 (21%), Positives = 106/246 (43%), Gaps = 6/246 (2%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFL--LSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 S +LG + S + + +RQ+ ++ +F+ G A Sbjct: 10 SVGSLLGAIFSVGARCLPRVLLGRATIVERETVRQILSFQSGTAFASVMTAFIYGLAAAY 69 Query: 185 QGAFQLSQFGA-EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 + A E + + L + A ++ + + ++I SM+ ++E+DA Sbjct: 70 AVLSNTASPAAFETLVLPQLGGAFLHYVVPFAIANLVVLKGVVGMTSDITSMRASQEVDA 129 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + +GL ++ +PR ALI++ P L +L +SA +GA +V+W F F + F S Sbjct: 130 LEAVGLHPAEMIFAPRALALIVTAPALAVLGVYSACLGAWLVVWLTAGTGFVAFVAAFAS 189 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS--LGKKVTTCVVQSISIVIIID 361 + T + + K A A+ +++ GF VG + +G T+ V ++ I+++ Sbjct: 190 SVTSIGMLFAVGKLAITALAMSLISGYFGF-VGARAEQGFVGHITTSAVAMAVFSTIVVN 248 Query: 362 SLFAIF 367 L ++ Sbjct: 249 LLLSLL 254 >gi|296115253|ref|ZP_06833894.1| putative ABC transport system permease protein [Gluconacetobacter hansenii ATCC 23769] gi|295978354|gb|EFG85091.1| putative ABC transport system permease protein [Gluconacetobacter hansenii ATCC 23769] Length = 302 Score = 95.7 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 44/237 (18%), Positives = 91/237 (38%), Gaps = 5/237 (2%) Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY 161 F IG+ + + + + + A S +RQ+ Sbjct: 38 RFLLRVAPWLAAIGRFVRHQVRFTLMLVGAGWGTLRESLRPNAWRRPVIFEFRSCLRQVI 97 Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221 G+ ++ + + G ++ Q A+ L G + ++ + +REI +L +++ Sbjct: 98 AGGLIS---TVVTATLAGLMVVSQAAYWLGFAGMAQMTGSILVSVLVREITPILMGIILL 154 Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281 GRSG + +IG M +N ++ ++ GLD L+ PR +A ++ L I+ +++ Sbjct: 155 GRSGMLSLTQIGLMVLNGQVRTMQARGLDPFLTLVMPRAFAFMVGGFSLGIIFAVVSLLM 214 Query: 282 ASIVIWKYYDIPFA--VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 V I + FF + T + +K + +G+ A G V Sbjct: 215 GFFVAHATGAINSSVWTFFFNVLAAMTTWDYLIIPLKFLLVGFFVGLGACISGLTVS 271 >gi|315635511|ref|ZP_07890777.1| ABC superfamily ATP binding cassette transporter, permease protein [Arcobacter butzleri JV22] gi|315480269|gb|EFU70936.1| ABC superfamily ATP binding cassette transporter, permease protein [Arcobacter butzleri JV22] Length = 91 Score = 94.2 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 31/91 (34%), Positives = 51/91 (56%) Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 I+ D+ F F +R H+ L ++ G+ KA F AI I+ GF V ++ S+ Sbjct: 1 MIIASSSLDVTFIEFINRLHNEVPLKHLILGVFKALFFGFAIAIIGCYRGFQVQNNTTSI 60 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 GK T VV +I +VI+ID++F++ + +GI Sbjct: 61 GKFTTMSVVNAIFVVILIDAVFSVIFTQMGI 91 >gi|114328087|ref|YP_745244.1| ABC transporter permease [Granulibacter bethesdensis CGDNIH1] gi|114316261|gb|ABI62321.1| ABC transporter permease protein [Granulibacter bethesdensis CGDNIH1] Length = 273 Score = 92.6 bits (229), Expect = 9e-17, Method: Composition-based stats. Identities = 36/239 (15%), Positives = 83/239 (34%), Gaps = 5/239 (2%) Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 + + + IG+ + V+ G + + Q Sbjct: 7 PAQSFARVRLFLRVIGRGTRNMLRFLLIMVAASAGVVLEVGRPSCWRRTTRAAFGQTLHQ 66 Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219 GV + + + G + Q + L G + +++ + LRE+ +L ++ Sbjct: 67 AAGGGVIS---TLFTATLVGIAMISQAIYWLGFAGMVESTGTILATILLRELSPILVGII 123 Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279 + GRSG +++E+G + N I + G+D ++I PR A +S L ++ +A+ Sbjct: 124 LLGRSGMPMISELGMLSANGHIRTLEAQGIDPFILIIVPRTIAFTVSAFTLGMVFAVTAL 183 Query: 280 IGASIVIW--KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 F + + + + +K + +G+ + G + Sbjct: 184 CVGFAAATEEGLITQSLWGFLTSVTGSMSELDYIIIPLKLMVVGFLVGLSSCLTGLSAQ 242 >gi|315122739|ref|YP_004063228.1| ABC transporter [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496141|gb|ADR52740.1| ABC transporter [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 147 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 56/108 (51%), Positives = 75/108 (69%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 SENG+ VFR G+W+S EIS+I+ +++ INKS Q D AIVDL ITEIDTIG I+YF Sbjct: 18 SENGVKVFRLTGSWRSAEISKISKGILITINKSTQEDLAIVDLLEITEIDTIGVATIIYF 77 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 EKY GKI+LQG++ H+EQLFS++S K+K + + F +N Sbjct: 78 TEKYRGKIQLQGMTAHMEQLFSIMSLNPNNKLKQKNQKIYFLMIFLEN 125 >gi|4580939|gb|AAD24544.1| YrbE1A [Mycobacterium leprae] Length = 112 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 8/119 (6%) Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +P+ +L+ F ++A QF A S +I + ++G L T +++AG + Sbjct: 2 SIPLTVLLIFTLNVLLA--------QFSAADLSGAGAAIGAVTQLGPLTTVLVVAGAGST 53 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 +I A++G+ I EEIDA+ +G+D + L+ PR+ A + LL L ++G + Sbjct: 54 SICADLGARTIREEIDAMEVLGIDPIHRLVVPRVLAATLVATLLNGLVITVGLVGGYLF 112 >gi|41406191|ref|NP_959027.1| hypothetical protein MAP0093 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394539|gb|AAS02410.1| hypothetical protein MAP_0093 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 175 Score = 83.8 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 63/131 (48%), Gaps = 6/131 (4%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVILISFVT 178 + H+L + +++ L L+ + + VG V +++ F Sbjct: 25 TMRLGHMLVFFVRAVLAVPTVLRQYRTEFLRLLSNIAWGNGSIVVGGGTAGVAVVLGFTA 84 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA++A +G L+ G + + S++ RE+ ++ ++ A ++G A++G+M+I Sbjct: 85 GALVAVEGYNFLNLLGLGPATGIISSLVNTRELAPIMASLAFAMQAGCRFTAQLGAMRIA 144 Query: 239 EEIDAIRTMGL 249 EEIDA+ ++ + Sbjct: 145 EEIDALESLAI 155 >gi|307777742|dbj|BAJ21267.1| ABC transporter permease [Pseudomonas aeruginosa] Length = 66 Score = 83.4 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 28/62 (45%) Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 N+ G+IK+ A + +A+ +G+ S + + T VV + V+ +D + Sbjct: 3 NVLNGVIKSIVFAFVVTWIAVYQGYDCEPTSEGISRATTRTVVYASLAVLGLDFILTALM 62 Query: 369 FA 370 F Sbjct: 63 FG 64 >gi|121594930|ref|YP_986826.1| ABC-type transport system permease [Acidovorax sp. JS42] gi|222110419|ref|YP_002552683.1| hypothetical protein Dtpsy_1216 [Acidovorax ebreus TPSY] gi|120607010|gb|ABM42750.1| ABC-type transport system ipermease component [Acidovorax sp. JS42] gi|221729863|gb|ACM32683.1| protein of unknown function DUF140 [Acidovorax ebreus TPSY] Length = 269 Score = 79.1 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 84/209 (40%), Gaps = 2/209 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG V+ + S + L R MY + +++ + VI + Sbjct: 31 LGAVVMVL--MLSPSSYGRATRWRLARHMYQDTAPILLGFTVLAALISLVITRIVVVTAL 88 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 +G ++++++ + + E+ L A+ +A R+ ++ M+ + + A+R G D Sbjct: 89 SYGLSRYALEMVIRVLVLELIPLTAALFVAMRATIPNGTQLALMRQSGHLQALRQRGADP 148 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 VR+ + PR+ A + + L L+ A++ A + ++ V+ F Sbjct: 149 VRMELLPRVVAGVYASITLAALSCVVALVMAYLGVYGLNTAGLPVYTRMFGHVFAPQITL 208 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 ++K F + A+ ++ M G + Sbjct: 209 VFVLKTVFFSLAVALIPMASGLYESGDAR 237 >gi|108798620|ref|YP_638817.1| putative ABC transport system permease protein [Mycobacterium sp. MCS] gi|108769039|gb|ABG07761.1| putative ABC transport system permease protein [Mycobacterium sp. MCS] Length = 161 Score = 78.4 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 15/143 (10%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI--------- 172 D QA G IS+T + + ++RQ+ +G+ + + Sbjct: 25 WRDLGDQARFYGQSISSTVQAAT------TYRAEVLRQIAAIGLGAGSLAVVGGTVAVVA 78 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 ++ T A +A Q Q+SQ G E + + + +R +A A G+ A++ Sbjct: 79 FLNLSTSAALASQAYNQMSQVGVEALAGFTSAYVNVRLATPASSAFAFAATIGAGTTAQL 138 Query: 233 GSMKINEEIDAIRTMGLDFVRIL 255 G+MKINEEIDA+ MG+ + L Sbjct: 139 GAMKINEEIDALAVMGIRPIAYL 161 >gi|120610497|ref|YP_970175.1| ABC-type transport system permease [Acidovorax citrulli AAC00-1] gi|120588961|gb|ABM32401.1| ABC-type transport system ipermease component [Acidovorax citrulli AAC00-1] Length = 266 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 80/210 (38%), Gaps = 2/210 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG V++ + S + L R MY + + + V+ Sbjct: 32 LGAVVAVL--MLSPSSYGRFTRARLARHMYLDTAPLLLGFTALVALICLVVTHIVVITAR 89 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 +G +++ ++ + + E+ L A+ +A R+ ++ M+ + DA+R G D Sbjct: 90 SYGLSHYALQMVVRVLVLELIPLTAALFVALRTTIPGGTQLALMRQSGHWDALRARGADP 149 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 VR+ + PR+ A + + L L+ A++ A + ++ + F T Sbjct: 150 VRVELLPRVVAGMYASITLAALSCVVALVMAYLGVYGASTAGVPAYTRMFGQVFTPPLTL 209 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341 ++K + A+ ++ M G + Sbjct: 210 LFVLKTLLFSLAVALIPMAAGLHATGDPRA 239 >gi|121604691|ref|YP_982020.1| ABC-type transport system permease [Polaromonas naphthalenivorans CJ2] gi|120593660|gb|ABM37099.1| ABC-type transport system ipermease component [Polaromonas naphthalenivorans CJ2] Length = 267 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 96/232 (41%), Gaps = 6/232 (2%) Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 S+ G+ ++ + H+ +++ T + S + L L R +Y Sbjct: 6 SWHRRLTRTGQAAQQWFIEWWQLIHLGAVILVLT---LSPSSYRRENRLVLGRHIYMSTA 62 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 + L+ + VI + +G +++ ++ + + E+ L A+ +A R Sbjct: 63 PILLGFSLLCALVTVVITRIVMVTALSYGLSQYALQVVIRVLVLELIPLSAALFVALRCT 122 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 AE+ +M+ + E+D +R G++ +R + PR+ A + S L L+ A++ A + Sbjct: 123 IPDGAELTAMQASGELDEMRRQGVEPIRREVLPRVVAGMFSGITLAALSCVVAVMVAYVA 182 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV---AMKEGFA 334 ++ + AV+ F T A ++K F A+ ++ + G Sbjct: 183 VYGFAVSGLAVYTRLFGQVFTPAVTLIFVLKTVFFCLAVSLIPMASALYGMR 234 >gi|326316567|ref|YP_004234239.1| hypothetical protein Acav_1754 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373403|gb|ADX45672.1| protein of unknown function DUF140 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 266 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 83/225 (36%), Gaps = 2/225 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + + + LG V++ + S + L R MY + + Sbjct: 17 RAARGWALAWWRIVYLGAVVAVL--MLSPSSYGRSTRARLARHMYIDTAPLLLGFTALVA 74 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 + V+ +G +++ ++ + + E+ L A+ +A R+ ++ M+ Sbjct: 75 LICLVVTHIVVVTARSYGLSHYALQMVVRVLVLELIPLTAALFVALRTTIPGGTQLALMR 134 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 + DA+R G D VR+ + PR+ A I + L L+ A++ A + ++ Sbjct: 135 RSGHWDALRARGADPVRVELLPRVVAGIYASITLAALSCVVALVMAYLGVYGASTAGVPA 194 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341 + F T +K + A+ ++ M G + Sbjct: 195 YTRMFGQVFTPPVTLLFALKTLLFSLAVALIPMAAGLHATGDPRA 239 >gi|121607549|ref|YP_995356.1| ABC-type transport system permease [Verminephrobacter eiseniae EF01-2] gi|121552189|gb|ABM56338.1| ABC-type transport system ipermease component [Verminephrobacter eiseniae EF01-2] Length = 287 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 89/218 (40%), Gaps = 2/218 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + + + LG V+ + S G +L R++Y +P +++ Sbjct: 40 HMARRWALAWWRIFYLGAVVLVL--ALSPSSYGPGRRQALARRLYLDTAPVLPGFTVLAA 97 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 + V+ + +G ++++++ + + E+ L A+ +A R A++ ++ Sbjct: 98 LISLVLTRIVVVTALSYGLSRYALEMVIRVLVLELIPLTAALFVAMRCTIGHGAQLAQLR 157 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 + ++DA+ GLD VR + PR A + + L L++ A++ + ++ Sbjct: 158 QSGQLDALARQGLDPVRTELLPRAIAGVFACVTLAALSSVVALVLVYLGVYGLNGAGLPG 217 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 + F + +K F + A+ ++ M G Sbjct: 218 YTRMFGQVFSPGVTLVLALKTLFFSLAVALIPMGAGLY 255 >gi|91788521|ref|YP_549473.1| ABC-type transport system permease [Polaromonas sp. JS666] gi|91697746|gb|ABE44575.1| ABC-type transport system ipermease component [Polaromonas sp. JS666] Length = 267 Score = 73.7 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 94/232 (40%), Gaps = 6/232 (2%) Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 S++ IG+ +++ + H L + S + L L R +Y Sbjct: 6 SWQGRLTQIGRAAQQWVIEWWRLIH---LGALLLVLTLSPSSYSRESRLVLSRHIYLNTA 62 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 + ++ + V+ + +G +++ ++ + + E+ L A+ +A R Sbjct: 63 PILLWFTVLCALVTVVLTRIVVVTALSYGLSQYALQVVIRVLVLELIPLTAALFVALRCT 122 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 AE+ +M+ + ++D +R G D VR + PR+ A + S L L++ A++ A + Sbjct: 123 IPDGAELTAMQASGQLDEMRRQGGDPVRREVLPRVVAGMFSGITLAALSSVVALVVAYVA 182 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV---AMKEGFA 334 ++ + A + F + A ++K F A+ ++ + G Sbjct: 183 VYGFTVSGLAAYTRLFGQVFSPAVTLIFVLKTLFFCLAVALIPMASALYGMR 234 >gi|41406205|ref|NP_959041.1| hypothetical protein MAP0107 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394553|gb|AAS02424.1| hypothetical protein MAP_0107 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 119 Score = 73.7 bits (180), Expect = 5e-11, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 38/111 (34%) Query: 261 WALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320 A +I++ L I + +V + F + +I ++K Sbjct: 1 MASVIAVIPLYIACLAVTYLTCQVVANIISGGSIGPYLHYFTMMLSAKDIAYSVLKCVVF 60 Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 V GF +G + SI++VI+++ L + ++I Sbjct: 61 VWLSSTVQCYYGFYAAGGPEGVGVAAGHAMRASITVVIMVNMLLTMALWSI 111 >gi|134094912|ref|YP_001099987.1| hypothetical protein HEAR1705 [Herminiimonas arsenicoxydans] gi|133738815|emb|CAL61862.1| putative ABC-type transport system involved in resistance to organic solvents, permease component [Herminiimonas arsenicoxydans] Length = 258 Score = 73.4 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 29/214 (13%), Positives = 92/214 (42%), Gaps = 3/214 (1%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 +G+ +++++ G+++ + + + + ++ Q+ + + + Sbjct: 1 MGRAMLRWLIGGWRIVLF-GMLVLSL--SFSPATYQRDNRHAIAYQIVLGTTANLVWFSV 57 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 ++ + ++ + +G ++++++ + + E+ L A+ +A R E+ Sbjct: 58 LTALASLILIRIVVVTALSYGLSKYALEMVVRVLVLELIPLTAALFVALRRTLPDGVELA 117 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 M+ E+++++ G+D +R PR A + S+ +L ++ ++I A + I+ + Sbjct: 118 EMRARGELESLQRQGIDPIRREFFPRAVAGVFSVLMLAAVSCVLSLILAYLSIYGFTHWA 177 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327 A + A L+K F + A+ ++ Sbjct: 178 LAGYTRVVGQIFNPAVSMIFLLKTLFFSLAVSLI 211 >gi|54296206|ref|YP_122575.1| hypothetical protein lpp0232 [Legionella pneumophila str. Paris] gi|148358387|ref|YP_001249594.1| putative ABC transport system permease [Legionella pneumophila str. Corby] gi|296105737|ref|YP_003617437.1| probable ABC transport system permease protein [Legionella pneumophila 2300/99 Alcoy] gi|53749991|emb|CAH11379.1| hypothetical protein lpp0232 [Legionella pneumophila str. Paris] gi|148280160|gb|ABQ54248.1| probable ABC transport system permease protein [Legionella pneumophila str. Corby] gi|295647638|gb|ADG23485.1| probable ABC transport system permease protein [Legionella pneumophila 2300/99 Alcoy] Length = 251 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 39/262 (14%), Positives = 90/262 (34%), Gaps = 16/262 (6%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + K I+ F++ LG ++ +T + K + + +YY G V Sbjct: 3 VFRRFSKHIITFLHSLELAFRFLGHLVDSTIKVIFG--KLSIVWPNTLEMIYYSGARLVI 60 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ I + GA ++Q L F + ++ + EI +L ++ ++ Sbjct: 61 LLSFIGILLGATVSQTVYALLKPFQLHQRVLPIVQNILTHEILPVLIGFILCIQAAL--- 117 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRIL---ISPRIWALIISLPLLTILANFSAIIGASIVI 286 M + + I+ + P I + I+ LL + + + Sbjct: 118 ----HMVNTR----LEHYQENPEAIILAQVLPIIVGMNIASLLLYVYLVSAIFFSFYLTF 169 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 F S S+ TL ++ ++K + +G+ + + + L K V Sbjct: 170 HFMLGFTNNEFLSYVVSSTTLFDLIYSVVKTLILCIIVGLTSGYYYYEASIRHIYLRKAV 229 Query: 347 TTCVVQSISIVIIIDSLFAIFY 368 + + + +II + + Sbjct: 230 SRILTRGSFWLIIASMYITLTF 251 >gi|307608999|emb|CBW98412.1| hypothetical protein LPW_02641 [Legionella pneumophila 130b] Length = 251 Score = 71.0 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 91/262 (34%), Gaps = 16/262 (6%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + K I+ F++ LG ++ +T + K + + +YY G V Sbjct: 3 VFRRFSKPIITFLHSLELAFRFLGHLVHSTIKVIFG--KLSIVWPNTLEMIYYSGARLVI 60 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ I + GA ++Q L F + ++ + EI +L ++ ++ Sbjct: 61 LLSFIGILLGATVSQTVYALLKPFQLHQRVLPIVQNILTHEILPVLIGFILCIQAAL--- 117 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRIL---ISPRIWALIISLPLLTILANFSAIIGASIVI 286 M + + I+ + P I + I+ LL + F+ + Sbjct: 118 ----HMVNTR----LEHYQENPEAIILAQVLPIIVGMNIASLLLYVYLVFAIFFSFYLTF 169 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 F S S+ TL ++ ++K + +G+ + + + L K V Sbjct: 170 HFMLGFTNNEFLSYVVSSTTLFDLIYSVVKTLILCIIVGLTSGYYYYEASIRHIYLRKAV 229 Query: 347 TTCVVQSISIVIIIDSLFAIFY 368 + + + +II + + Sbjct: 230 SRILTRGSFWLIIASMYITLTF 251 >gi|54293187|ref|YP_125602.1| hypothetical protein lpl0233 [Legionella pneumophila str. Lens] gi|53753019|emb|CAH14462.1| hypothetical protein lpl0233 [Legionella pneumophila str. Lens] Length = 251 Score = 70.7 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 91/262 (34%), Gaps = 16/262 (6%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + K I+ F++ LG ++ +T + K + + +YY G V Sbjct: 3 VFRRFSKPIITFLHSIELAFRFLGHLVHSTIKVIFG--KLSIVWPNTLEMIYYSGARLVI 60 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ I + GA ++Q L F + ++ + EI +L ++ ++ Sbjct: 61 LLSFIGILLGATVSQTVYALLKPFQLHQRVLPIVQNILTHEILPVLIGFILCIQAAL--- 117 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRIL---ISPRIWALIISLPLLTILANFSAIIGASIVI 286 M + + I+ + P I + I+ LL + F+ + Sbjct: 118 ----HMVNTR----LEHYQENPEAIILAQVLPIIVGMNIASLLLYVYLVFAIFFSFYLTF 169 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 F S S+ TL ++ ++K + +G+ + + + L K V Sbjct: 170 HFMLGFTNNEFLSYVVSSTTLFDLIYSVVKTLILCIIVGLTSGYYYYEASIRHIYLRKAV 229 Query: 347 TTCVVQSISIVIIIDSLFAIFY 368 + + + +II + + Sbjct: 230 SRILTRGSFWLIIASMYITLTF 251 >gi|327538488|gb|EGF25152.1| membrane protein containing ABC transporter-like domain [Rhodopirellula baltica WH47] Length = 527 Score = 70.7 bits (172), Expect = 4e-10, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 97/279 (34%), Gaps = 19/279 (6%) Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167 + + +F++ + + + FL +R + G S Sbjct: 251 TGPLAMLRRGAERFLDSTGRSLVAAARLPWDARPVVPRMKWAGRFLAHYLRLVG--GPSA 308 Query: 168 VPVVILISFVTGAVIAQQGAFQL-----SQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 +I+ + G L +Q + + R + +L V+IA Sbjct: 309 WVYLIIAGLIAGFTTTYFTLRFLPFRLYTQPLLIDELLSSIGFALYRILVPVLATVLIAA 368 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 R G+A+ A++G + ++DA RT+G+ L+ P + A +I+ P+L +A ++ + Sbjct: 369 RCGAAVAADVGVKQYGGQVDAFRTLGIRAPAYLLIPILAAFLIATPILEWIAFTASHWIS 428 Query: 283 SIVIWKYYDIPFAVFFSR-FHSTATLANIFTGLI-----------KAPFMACAIGIVAMK 330 + + F+ + F T +I K + Sbjct: 429 RVTFNFSHPEIGVHFWQQHFFRAITPDTTGGSIITWWKGWDWVLAKNLLCGFGTAAIGYH 488 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 +G + + +T V+ + V+++ + A+ F Sbjct: 489 QGITPKHSAGDVSHCITATVLWTTLYVLVVHFVVALLEF 527 >gi|32472426|ref|NP_865420.1| sulfate transport ATP-binding protein cysA [Rhodopirellula baltica SH 1] gi|32443662|emb|CAD73104.1| sulfate transport ATP-binding protein cysA [Rhodopirellula baltica SH 1] Length = 527 Score = 70.3 bits (171), Expect = 5e-10, Method: Composition-based stats. Identities = 49/321 (15%), Positives = 108/321 (33%), Gaps = 32/321 (9%) Query: 78 IEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVIS 137 + I R + N Q S L+ ++ + A + Sbjct: 210 FDSAAQTIRRIDRSEWPNVAEQMEAVALSPSQLNEAGSEQATGPLAMLRRGAE---RFLD 266 Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYV------------GVSGVPVVILISFVTGAVIAQQ 185 +TG ++ + ++ +M + G S +I+ + G Sbjct: 267 STGRSLVAAARLPWDARPVVPRMKWAGRFLAHYLRLVGGPSAWVYLIIAGLIAGFTTTYF 326 Query: 186 GAFQL-----SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 L +Q + + R + +L V+IA R G+A+ A++G + + Sbjct: 327 TLRFLPFRLYTQPLLIDELLSSIGFALYRILVPVLATVLIAARCGAAVAADVGVKQYGGQ 386 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +DA RT+G+ L+ P + A +I+ P+L +A ++ + + + F+ + Sbjct: 387 VDAFRTLGIRAPAYLLIPILAAFLIATPILEWIAFTASHWISRVTFNFSHPEIGVHFWQQ 446 Query: 301 -FHSTATLANIFTGLI-----------KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 F T +I K + +G + + +T Sbjct: 447 HFFRAITPDTTGGSIITWWKGWDWVLAKNLLCGFGTAAIGYHQGITPKHSAGDVSHCITA 506 Query: 349 CVVQSISIVIIIDSLFAIFYF 369 V+ + V+++ + A+ F Sbjct: 507 TVLWTTLYVLVVHFVVALLEF 527 >gi|296161924|ref|ZP_06844724.1| hypothetical protein BCh11DRAFT_5991 [Burkholderia sp. Ch1-1] gi|295887800|gb|EFG67618.1| hypothetical protein BCh11DRAFT_5991 [Burkholderia sp. Ch1-1] Length = 218 Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 53/158 (33%), Gaps = 4/158 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 V GNW P + +++ + Q +D S + DT GA L+ + Sbjct: 40 VLAIIGNWTLPHYDTLR---ALSVERVTQDAITSLDFSRLGGHDTAGAALLAQVLGPERL 96 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + L + +L+ K + N L IG +++ + + + Sbjct: 97 QSLLHDATGLDHDRLALLDAVVLAVGKVAGQPVTRRRNGVIELLERIGAAVLRLAHRTVA 156 Query: 128 QAHILGLVISNTGEFCASS-YKFKGFLLSLIRQMYYVG 164 +GLV+ + + + L R+ + G Sbjct: 157 LLGFIGLVLESLMLAACRPKARPRRTEHLLQRESCFSG 194 >gi|52840425|ref|YP_094224.1| ABC transporter permease [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52627536|gb|AAU26277.1| probable ABC transport system permease protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 251 Score = 69.9 bits (170), Expect = 7e-10, Method: Composition-based stats. Identities = 39/262 (14%), Positives = 90/262 (34%), Gaps = 16/262 (6%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + K I+ F++ LG ++ +T + K + + +YY G V Sbjct: 3 VFRRFSKPIITFLHSLELAFRFLGHLVHSTIKVIFG--KLSIVWPNTLEMIYYSGARLVI 60 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ I + GA ++Q L F + ++ + EI +L ++ ++ Sbjct: 61 LLSFIGILLGATVSQTVYALLKPFQLHQRVLPIVQNILTHEILPVLIGFILCIQAAL--- 117 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRIL---ISPRIWALIISLPLLTILANFSAIIGASIVI 286 M + + I+ + P I + I+ LL + + + Sbjct: 118 ----HMVNTR----LEHYQENPEAIILAQVLPIIVGMNIASLLLYVYLVSAIFFSFYLTF 169 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 F S S+ TL ++ ++K + +G+ + + + L K V Sbjct: 170 HFMLGFTNNEFLSYVVSSTTLFDLIYSVVKTLILCIIVGLTSGYYYYEASIRHIYLRKAV 229 Query: 347 TTCVVQSISIVIIIDSLFAIFY 368 + + + +II + + Sbjct: 230 SRILTRGSFWLIIASMYITLTF 251 >gi|149918279|ref|ZP_01906770.1| amino acid ABC transporter, ATP-binding protein [Plesiocystis pacifica SIR-1] gi|149820805|gb|EDM80214.1| amino acid ABC transporter, ATP-binding protein [Plesiocystis pacifica SIR-1] Length = 561 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 30/214 (14%), Positives = 69/214 (32%), Gaps = 6/214 (2%) Query: 78 IEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVIS 137 + ++ +++ +K + + K ++ + V++ Sbjct: 257 AAHVGDQMAERLGRELTPEKSDDARSKGLLARAAGSLASKASGALDAILGGLEVGPRVLA 316 Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ---FG 194 G F ++RQ ++S + G + L Sbjct: 317 QLGRALLRPRDFAEVFGPVLRQAL---WRPAAFFAVVSTLIGFTLLYILHRSLGGGELPL 373 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 L+ + + + L+ ++ A S +AIVA +G M + + A+R +G+ R Sbjct: 374 RPDRVFSLIGSMHVIALAPPLSGILFAATSANAIVAWLGGMSLTRQTTALRALGIGESRY 433 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 L P L+ + L L + G + + Sbjct: 434 LWVPAWLGLVGAYLALAALFTLGMLGGGVLYVVF 467 >gi|264677704|ref|YP_003277610.1| ABC transporter permease [Comamonas testosteroni CNB-2] gi|262208216|gb|ACY32314.1| ABC-type transport system ipermease component [Comamonas testosteroni CNB-2] Length = 267 Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 94/252 (37%), Gaps = 6/252 (2%) Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 G+ + + + L + S K L +QM+ + + Sbjct: 12 GRIWAALGAQALAWWRSIYLTAVLLVLVSSPSSYRKRGRAMLAQQMFAQTAPILTGFTAL 71 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 + + AVIA+ +G +++DL+ + + E+ L A+ +A R ++ Sbjct: 72 AALLCAVIARIVIVTAQSYGLSRYALDLVVRVMVIELIPLTAALFVAMRCTIPAGVQVVQ 131 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 M++ ++ +T G+D VR + PR A + + L L+ A++ + ++ + F Sbjct: 132 MRMQGQLAKWKTQGIDPVRAALVPRAAAGVFAAITLAALSCIVALVTVYLSVYGFSLAGF 191 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV------GVHSNSLGKKVTT 348 + F T + ++K F + + ++ + + G Sbjct: 192 GAYTRIFGQIFTPSLTLVFVLKTWFFSLTVAVMPLASAMYTPVARHRQGGAELGGFARMF 251 Query: 349 CVVQSISIVIII 360 V+ I ++ ++ Sbjct: 252 AVLLLIEVISLM 263 >gi|299530299|ref|ZP_07043724.1| ABC-type transport system ipermease component [Comamonas testosteroni S44] gi|298721670|gb|EFI62602.1| ABC-type transport system ipermease component [Comamonas testosteroni S44] Length = 267 Score = 68.0 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 95/252 (37%), Gaps = 6/252 (2%) Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 G+ + + + L + S K L +QM+ + + Sbjct: 12 GRIWAALGAQALAWWRSIYLTAVLLVLVMSPSSYQKHGRAMLAQQMFAQTAPILTGFTAL 71 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 + + AVIA+ +G +++DL+ + + E+ L A+ +A R ++ Sbjct: 72 AALLCAVIARIVIVTAQSYGLSRYALDLVVRVMVIELIPLTAALFVAMRCTIPAGVQVVQ 131 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 M++ ++ +T G+D VR + PR A + + L L+ A++ + ++ + F Sbjct: 132 MRMQGQLAKWKTQGIDPVRAALVPRAAAGVFAAVTLAALSCIVALVTVYLSVYGFSLAGF 191 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV------GVHSNSLGKKVTT 348 A + F T + ++K F + + ++ + + G Sbjct: 192 AAYTRIFGQIFTPSLTLVFVLKTWFFSLTVAVMPLASAMYTPVARHRQGGAELGGFARMF 251 Query: 349 CVVQSISIVIII 360 V+ I ++ ++ Sbjct: 252 AVLLLIEVISLM 263 >gi|221068184|ref|ZP_03544289.1| protein of unknown function DUF140 [Comamonas testosteroni KF-1] gi|220713207|gb|EED68575.1| protein of unknown function DUF140 [Comamonas testosteroni KF-1] Length = 267 Score = 68.0 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 94/252 (37%), Gaps = 6/252 (2%) Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 G+ + + + L + S K L +QMY + + Sbjct: 12 GRIWAALGAQALAWWRSIYLTAMLLVLISSPSSYQKHGRAMLAQQMYAQTAPILTGFTAL 71 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 + + AVIA+ +G +++DL+ + + E+ L A+ +A R ++ Sbjct: 72 AALLCAVIARIVIVTAQSYGLSRYAMDLVVRVMVIELIPLTAALFVAMRCTIPAGVQVVQ 131 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 M+ ++ +T G+D VR + PR A + + L L+ A++ + ++ + F Sbjct: 132 MRTQGQLAKWKTQGIDPVRAALVPRAAAGVFAAVTLAALSCIVALVTVYLSVYGFSLAGF 191 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV------GVHSNSLGKKVTT 348 A + F T + ++K F + + ++ + + G Sbjct: 192 AAYTRIFGQIFTPSLTLVFVLKTWFFSLTVAVMPLASAMYTPVARHRQGGAELGGFARMF 251 Query: 349 CVVQSISIVIII 360 V+ I ++ ++ Sbjct: 252 AVLLLIEVISLM 263 >gi|99034269|ref|ZP_01314324.1| hypothetical protein Wendoof_01000880 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 55 Score = 68.0 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 10/52 (19%), Positives = 22/52 (42%) Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 KA I + + G+ + +G T+ VV S ++I+ + + + Sbjct: 2 KATAFGAIISVSSCYYGYHCKEGARGVGVATTSTVVLSSILIILANYMITLI 53 >gi|152982121|ref|YP_001353647.1| ABC-type transport system, permease component [Janthinobacterium sp. Marseille] gi|151282198|gb|ABR90608.1| ABC-type transport system, permease component [Janthinobacterium sp. Marseille] Length = 271 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 36/222 (16%), Positives = 86/222 (38%), Gaps = 3/222 (1%) Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 G V ++ +V+S T + + + ++ Q+ Sbjct: 6 PVPQTIVRTGGAAVGWLLGGWRILLFGVIVLSLT---FSPTTYKREHRYAIAHQLVLGTS 62 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 + + L+S + ++ + +G +++D++ + + E+ L A+ +A R Sbjct: 63 TNLIWFSLLSSLISVILIRIVMVTALSYGLSKYALDMVVRMLVLELIPLTAALFVALRRT 122 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 E+ M+ ++ A+R G+D +R PR A I S+ +L ++ A+I + Sbjct: 123 LPDGVELAEMRRRGDLLAMRQQGVDPIRTEFFPRAIAGIFSVWMLAAVSCVLALILTYLS 182 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327 I+ + A + + L+K F + A+ ++ Sbjct: 183 IYGFTQWALADYTRVVGQIFNPSVSMIFLLKTLFFSLAVSLI 224 >gi|330875117|gb|EGH09266.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. glycinea str. race 4] Length = 113 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 49/105 (46%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 ++ + +LG L+RQ+Y VGV + ++++ Sbjct: 9 RVRLLGRSAIDIVTVLGRSGLFLVNALLGRGGAGSSFQLLVRQLYSVGVMSLVIIVVSGM 68 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221 G V+A QG L+++G+E ++++ LRE+G ++TA++ A Sbjct: 69 FIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFA 113 >gi|330826019|ref|YP_004389322.1| hypothetical protein Alide2_3477 [Alicycliphilus denitrificans K601] gi|329311391|gb|AEB85806.1| protein of unknown function DUF140 [Alicycliphilus denitrificans K601] Length = 278 Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 76/191 (39%), Gaps = 1/191 (0%) Query: 145 SSYKFKGFLLS-LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203 S ++ L RQM + ++ + VI +G ++++++ Sbjct: 49 SPSSYRPAARERLARQMLADTAPILLGFTALAALLSLVITHIVVVTALSYGLTRYALEMV 108 Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263 + + E+ L A+ +A R+ ++ ++ + A+R G D VR+ + PR+ A Sbjct: 109 IRVLVLELIPLTAALFVAMRTTIPSGVQLARLRQTGRLQALRERGADPVRMELLPRVLAG 168 Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323 + + L L+ A++ A + ++ + + F T + +K + A Sbjct: 169 VHASITLAALSCAVALVMAYLGVYGFNTAGLPAYTRMFGQVFTPSITLVFALKTLLFSLA 228 Query: 324 IGIVAMKEGFA 334 + ++ M G Sbjct: 229 VALIPMASGLY 239 >gi|319762168|ref|YP_004126105.1| hypothetical protein Alide_1457 [Alicycliphilus denitrificans BC] gi|317116729|gb|ADU99217.1| protein of unknown function DUF140 [Alicycliphilus denitrificans BC] Length = 271 Score = 66.4 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 76/191 (39%), Gaps = 1/191 (0%) Query: 145 SSYKFKGFLLS-LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203 S ++ L RQM + ++ + VI +G ++++++ Sbjct: 42 SPSSYRPAARERLARQMLADTAPILLGFTALAALLSLVITHIVVVTALSYGLTRYALEMV 101 Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263 + + E+ L A+ +A R+ ++ ++ + A+R G D VR+ + PR+ A Sbjct: 102 IRVLVLELIPLTAALFVAMRTTIPSGVQLARLRQTGRLQALRERGADPVRMELLPRVLAG 161 Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323 + + L L+ A++ A + ++ + + F T + +K + A Sbjct: 162 VHASITLAALSCAVALVMAYLGVYGFNTAGLPAYTRMFGQVFTPSITLVFALKTLLFSLA 221 Query: 324 IGIVAMKEGFA 334 + ++ M G Sbjct: 222 VALIPMASGLY 232 >gi|163792925|ref|ZP_02186901.1| sulfate transport ATP-binding protein cysA [alpha proteobacterium BAL199] gi|159181571|gb|EDP66083.1| sulfate transport ATP-binding protein cysA [alpha proteobacterium BAL199] Length = 528 Score = 65.7 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 48/324 (14%), Positives = 106/324 (32%), Gaps = 27/324 (8%) Query: 55 AELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI 114 A+ ++ + H ++L + +E+ I + + + + Sbjct: 214 ADRVLMLDPRRHALVELPANARRVERELEAIEAV-AVPFDEMRAEPLAPEKATATIAVSA 272 Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 G L + E C S + +VG+ V V + Sbjct: 273 GPMRASAAWRLSWTLRFLAGYLW---ELCFSP-----------SALLFVGLGSVIVGFVT 318 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 ++ L ++ ++ +LR + L T V+IA R+ + I A+IG Sbjct: 319 TWFI---FQYLPFRDLLMPIIHSDALAGLAFSELRVLAPLTTGVLIATRNTALIGADIGH 375 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 +++I ++R + + L + A ++ +L I++ A + W Y Sbjct: 376 KVYSDQIKSMRNLNIPHDVYLTGTVLVASAVASVVLVIMSECLTTWVA-MATWSYIFPDE 434 Query: 295 AVFF---SRFHSTATLANIFT---GLI--KAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + + F + G I KA +A+ G+ + + + Sbjct: 435 STYMWRDQYFQRMWPPGELIMDGTGWIAAKAIPSIVGAAGIALYFGYRPKSTVVDINQSI 494 Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370 ++ +S V+I S + F Sbjct: 495 AQALIWGLSFVLIWQSALTLIEFK 518 >gi|241764467|ref|ZP_04762489.1| protein of unknown function DUF140 [Acidovorax delafieldii 2AN] gi|241366102|gb|EER60693.1| protein of unknown function DUF140 [Acidovorax delafieldii 2AN] Length = 266 Score = 64.5 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 87/218 (39%), Gaps = 2/218 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + ++ + + LG V+ + S + +L R +Y + +++ Sbjct: 16 RTLRRWALAWGRIVYLGAVVLVL--VLSPSSYTRSARATLARHVYLDTAPILTGFTVLAA 73 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 + VI + +G ++++++ + + E+ L + +A R ++ ++ Sbjct: 74 LLCLVITRIVVVTALSYGLSRYALEMVIRVLVLELIPLTATLFVAMRCTIPAGTQLALLR 133 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 + DA+R G D VR+ + PR+ A + + L L+ A++ A + ++ + Sbjct: 134 QSGRFDALRAHGGDPVRMELLPRVAAGVFASITLAALSCVVALVMAYLSVYGFNLAGLPS 193 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 + F + A +K F + A+ ++ G Sbjct: 194 YTRMFGHVFSPAVTLVFSLKTLFSSLAVALIPTTAGMY 231 >gi|153006504|ref|YP_001380829.1| hypothetical protein Anae109_3665 [Anaeromyxobacter sp. Fw109-5] gi|152030077|gb|ABS27845.1| hypothetical protein Anae109_3665 [Anaeromyxobacter sp. Fw109-5] Length = 160 Score = 61.4 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 19/161 (11%), Positives = 47/161 (29%), Gaps = 17/161 (10%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61 E+G R +G+W I + + + +DT GA L+ Sbjct: 12 EDGA--VRCSGSWTIDRIGRVERALRGLAWPRGAAVVVDASAVG--SMDTAGAWLLKRTA 67 Query: 62 --MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 +E+ + L+ + E L +++ + + R + G+ Sbjct: 68 RGLERSGRTVTLR-LRPEHEALLEVVTSSGVVAAPPRARDRP-------RVLATFGRGAW 119 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 K + G + + + +++ + Sbjct: 120 KAARELGGLVTFFGEITVTAARARTGPLRVR--WRQVLQHV 158 >gi|160898358|ref|YP_001563940.1| ABC-type transport system permease [Delftia acidovorans SPH-1] gi|160363942|gb|ABX35555.1| ABC-type transport system ipermease component [Delftia acidovorans SPH-1] Length = 267 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 81/205 (39%), Gaps = 4/205 (1%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMY-YVGVSGVPVVILISFVTGAVIAQQGAFQL 190 LG V+ + S +G ++ Q+Y G + L + + + L Sbjct: 31 LGAVLLVL--AMSPSSYRRGARRAMAHQIYVQTGPILLGFTALAALLCAVITRIVIVTAL 88 Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 S +G ++++++ + + E+ L A+ +A R I ++ ++ A + G D Sbjct: 89 S-YGLSRYALEMVVRVLVIELIPLTAALFVAMRCTIPNGTLIAQLRARGQLQAWQERGSD 147 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 +R+ + PR + + L +L+ A++ + ++ + + F T A Sbjct: 148 PLRMALVPRAAGGVFASVTLAVLSCVVALVTVYLSVYGFTLAGLPGYTRIFGQIFTPAVT 207 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAV 335 ++K F + + I+ M G Sbjct: 208 LVFVLKTWFFSLTVAIMPMASGLYA 232 >gi|239943303|ref|ZP_04695240.1| putative YrbE family protein [Streptomyces roseosporus NRRL 15998] Length = 73 Score = 60.6 bits (146), Expect = 4e-07, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 31/73 (42%) Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG+ ++ L+ PR+ A ++ LL L + +G D + + F + Sbjct: 1 MEVMGVSPIQRLVVPRVLATMLVAVLLNGLISVVGTLGGYFFNVIMQDGTPGAYLASFSA 60 Query: 304 TATLANIFTGLIK 316 A L +++ K Sbjct: 61 LAQLPDLYISEFK 73 >gi|148823177|ref|YP_001287931.1| integral membrane protein YrbE3a [Mycobacterium tuberculosis F11] gi|148721704|gb|ABR06329.1| hypothetical integral membrane protein yrbE3A [Mycobacterium tuberculosis F11] Length = 132 Score = 60.3 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 18/120 (15%), Positives = 48/120 (40%), Gaps = 4/120 (3%) Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 G+ + + + + + + ++ +LL Q ++V +L+ Sbjct: 14 GRVADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLL----QCWFVARVSTLPGVLM 69 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 + + L+ GA FS +I + + ++T +++AG +A+ A++G+ Sbjct: 70 TIPWAVISGFLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGA 129 >gi|108798622|ref|YP_638819.1| hypothetical protein Mmcs_1653 [Mycobacterium sp. MCS] gi|108769041|gb|ABG07763.1| conserved hypothetical protein [Mycobacterium sp. MCS] Length = 116 Score = 58.7 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 15/107 (14%), Positives = 33/107 (30%) Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323 +I + L +A + ++ +Y VF F + +F A Sbjct: 1 MIVVVPLYCVALLMSFFSVRVITTAFYGQGSGVFDHYFDTFLNPQAVFFSFAVTVAAALV 60 Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 I ++ G +G+ V S+ ++ L + + Sbjct: 61 IMLIHTYYGLNATGGPAGVGEAVGRATRTSLIASQMVILLVTLALYG 107 >gi|329903553|ref|ZP_08273548.1| ABC-type transport system ipermease component [Oxalobacteraceae bacterium IMCC9480] gi|327548291|gb|EGF32984.1| ABC-type transport system ipermease component [Oxalobacteraceae bacterium IMCC9480] Length = 239 Score = 57.6 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 28/197 (14%), Positives = 73/197 (37%), Gaps = 1/197 (0%) Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190 + L + S ++ R +Y +P ++S + VI Sbjct: 1 MFYLGAIALVMALSPSSYYRANRAVTSRYIYTSTWQVLPWFTMLSALVCQVIIHIVVVTA 60 Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 +G ++++++ + + E+ L A+ +A RSG A A ++ E D + + + Sbjct: 61 ISYGLSQYALEMVVRVLVLELIPLSAALFVALRSGLAFDAS-TALPSRVEPDNLSRIDIK 119 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 +R P++ A ++ L ++++ +I A I ++ + + Sbjct: 120 RLRNEFVPQVIASAFAVISLAMISSVIVLILAYINVYGFLPWGLVDYTRTVGRVFDPIVT 179 Query: 311 FTGLIKAPFMACAIGIV 327 +K ++ ++ Sbjct: 180 IGFALKTLLFGLSVAVI 196 >gi|298292174|ref|YP_003694113.1| ABC transporter [Starkeya novella DSM 506] gi|296928685|gb|ADH89494.1| ABC transporter related protein [Starkeya novella DSM 506] Length = 506 Score = 56.8 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 88/246 (35%), Gaps = 20/246 (8%) Query: 141 EFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL-ISFVTGAVIAQQGAFQLSQFGA---- 195 + + F + + S + L + ++ F FG Sbjct: 262 RSMRGGHPLRWFARYFAEYFWVLCASPFMLAYLGLGGAILGFVSMWFGFNYHSFGGYLKS 321 Query: 196 --EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 ++ + +Q L+ ++++ R+ + I A++G+ ++ ++ A+R + + +R Sbjct: 322 ILHDETLAGIGFVQTTISVPLIASILVVARNSAVICADLGNRTLSAQLPAMRNLAIPGLR 381 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF--SRFHSTAT----- 306 L+ A +SL LLT+ A +A A ++ F+ + F Sbjct: 382 YLVVSIFVANTLSLSLLTVAALATASWAALQTWQVFFPDQPMEFWQENYFRRLIEAGPAL 441 Query: 307 ---LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 L + + + + I G + S+ + +V +S+ ++ + Sbjct: 442 YAQLGWVGAKIALSSLLGSGAAI---LIGLRPKLSVVSINNAIAKAIVIGVSLTLLSHAF 498 Query: 364 FAIFYF 369 FAI F Sbjct: 499 FAILQF 504 >gi|171056704|ref|YP_001789053.1| ABC-type transport system ipermease [Leptothrix cholodnii SP-6] gi|170774149|gb|ACB32288.1| ABC-type transport system ipermease component [Leptothrix cholodnii SP-6] Length = 249 Score = 56.8 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 70/165 (42%), Gaps = 1/165 (0%) Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 G + + +L + ++ VI LS +G ++++++ + + E+ L A+ A Sbjct: 43 TGPALLGFTVLTTLISLVVIRIVLVTALS-YGLSQYALEMVVRVLVLELIPLAAALFAAL 101 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 R AEI +++ + DA GL +R + PR+ A + L+ ++ ++ A Sbjct: 102 RCTIPNAAEIAALRARDGWDAWSPQGLQRLRSEVLPRMAASVFCALLMAAVSCVVTLVVA 161 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327 ++++ + F + + A +K F + ++ Sbjct: 162 YLLVYGFTSAGFGAYTHTVGRVFSPAVALIFGLKIVFFGLTVALM 206 >gi|169629235|ref|YP_001702884.1| hypothetical protein MAB_2149 [Mycobacterium abscessus ATCC 19977] gi|169241202|emb|CAM62230.1| Hypothetical protein MAB_2149 [Mycobacterium abscessus] Length = 217 Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 69/202 (34%), Gaps = 18/202 (8%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 +S TG ++ + RQ + V + +++ +I + FG Sbjct: 34 FLSMTGGVLVAALTRPPAVREFFRQAGAIARVSVLPMCMVAIPLAVLIVLVLEALV--FG 91 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 F ++ A + + AE S +I +I A+R+ G+D Sbjct: 92 PTGF--------------PTHAVLVAAAAGATVVFAEADSARIQRDIGAMRSRGIDITHG 137 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 + PR+ A ++ L +A A G P ++F + NI + Sbjct: 138 FVVPRVLATAVAAVPLAFIA--VAAAGVYFFSAFGKHTPLSLFIGNLLQLMSPLNILIVV 195 Query: 315 IKAPFMACAIGIVAMKEGFAVG 336 I+A + G++A G Sbjct: 196 IEAASLGLIAGLIACYRGATAT 217 >gi|311742619|ref|ZP_07716428.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272] gi|311314247|gb|EFQ84155.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272] Length = 116 Score = 55.2 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 39/105 (37%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + +G + + + Q +++ +L++ VI Sbjct: 6 FVRTLSTFGDFYTFSGNVFRQMFTRRFQFREFVSQAWFITTVSFGPALLVAIPFCVVIIF 65 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 Q L Q GA + ++ +REIG +++ +++AG + Sbjct: 66 QVNQLLIQIGAVDLAGAGAAVAVVREIGPIVSVLVVAGAGPGTVT 110 >gi|89900018|ref|YP_522489.1| ABC-type transport system permease [Rhodoferax ferrireducens T118] gi|89344755|gb|ABD68958.1| ABC-type transport system ipermease component [Rhodoferax ferrireducens T118] Length = 266 Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 31/213 (14%), Positives = 79/213 (37%), Gaps = 3/213 (1%) Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 G+ +++ H LG ++ + S + R +Y +P + Sbjct: 15 GRALLRGAASWWQMIH-LGAIVLVL--ALSPSTYNRINRAITSRHIYASTWQVLPWFTAM 71 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 + + V+ + +G +++ ++ + + E+ L A+ +A R+G A + Sbjct: 72 AALFSLVLIRIVVVTALNYGLSQYALQMVVRVLVLELIPLSAALFVALRAGMTFNAGAQT 131 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 D + L +R + PR+ A S+ L ++ + ++ A ++++ Sbjct: 132 NARPSPFDPSAPLSLTRLRADVVPRVLAGAFSVLTLAMINSVIVLVLAYLIVYGLSPWGL 191 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327 + L+ +K F + A+ +V Sbjct: 192 PGYTRTVGHVFDLSVTLGFALKTVFFSLAVAVV 224 >gi|304309830|ref|YP_003809428.1| predicted sulfate transporter/antisigma-factor antagonist STAS [gamma proteobacterium HdN1] gi|301795563|emb|CBL43761.1| predicted sulfate transporter/antisigma-factor antagonist STAS [gamma proteobacterium HdN1] Length = 114 Score = 53.3 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 38/106 (35%), Gaps = 6/106 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G R G +++ ++ + S +VDLS +TE DT G +L++ Sbjct: 10 DGGCKIRPEGELTIYRVADYKPQLIQVLES---HPSIVVDLSRVTEFDTAGLQLLILLKR 66 Query: 64 KYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106 + + G S + +LF L PQ + Sbjct: 67 EAKARGITSSFTGHSAEVTELFQLFDMVPYFGDPLVMPQDDSSRRA 112 >gi|270156845|ref|ZP_06185502.1| putative ABC transport system permease protein [Legionella longbeachae D-4968] gi|289164714|ref|YP_003454852.1| ABC transporter (permease) [Legionella longbeachae NSW150] gi|269988870|gb|EEZ95124.1| putative ABC transport system permease protein [Legionella longbeachae D-4968] gi|288857887|emb|CBJ11742.1| putative ABC transporter (permease) [Legionella longbeachae NSW150] Length = 252 Score = 52.9 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 33/227 (14%), Positives = 79/227 (34%), Gaps = 13/227 (5%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + +G V + +G + + + + LL+++R +YY GV V Sbjct: 3 VLNKLGVYFVGLVYSFILFLRFMGHLYCSLINMLMG--RLRLSLLNIVRTIYYAGVKLVI 60 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 + IS G + + L+ + + + + ++ + V++ + + Sbjct: 61 PFMFISTFLGISMVMKVNSILTPYNLQRDGRLIAQNILTHDLVPFIIGVLLCIQCALNFI 120 Query: 230 AEIGSMKINEEIDAIRTMGLD--FVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 ++K+NEE + + V I P + + I+ LL A + I + Sbjct: 121 ----NVKVNEE-----DLNVPQQVVVNHILPVLIGINIAGGLLYAYAIAAFFISIYVTYQ 171 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 + V R + TL ++ ++K + + + Sbjct: 172 YFLYTNLYVPMIRILTAITLYDVVYSILKTTLYCTIVSLTIGYYYYD 218 >gi|239981272|ref|ZP_04703796.1| hypothetical protein SalbJ_17681 [Streptomyces albus J1074] gi|291453129|ref|ZP_06592519.1| predicted protein [Streptomyces albus J1074] gi|291356078|gb|EFE82980.1| predicted protein [Streptomyces albus J1074] Length = 127 Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 13/100 (13%), Positives = 34/100 (34%), Gaps = 3/100 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G R AG + +V + + +D + +T D++G ++ + Sbjct: 28 GTLALRLAGALDHESADALVREVARRLAERPAPRLLRLDCAGLTACDSLGLSALLMIGRR 87 Query: 65 YHG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 ++L H+++L + ++P + Sbjct: 88 TGAAACALRLDRRPPHLDRLLEITGTHGYLVGPGEEPGPA 127 >gi|315927604|gb|EFV06935.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 114 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 38/92 (41%), Gaps = 6/92 (6%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 G W I ++ +A+ IQS I D + IDT G + ++ Sbjct: 11 TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKN 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96 + KI +G+++ + LF L +++ K + Sbjct: 68 KNIKITKEGLNSRFQTLFELCEKNYQRLGKTK 99 >gi|171060467|ref|YP_001792816.1| anti-sigma-factor antagonist [Leptothrix cholodnii SP-6] gi|170777912|gb|ACB36051.1| anti-sigma-factor antagonist [Leptothrix cholodnii SP-6] Length = 110 Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 11/107 (10%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60 + R G +E+ ++ + + +DLS +T+IDT G +L+M Sbjct: 9 DAPRTLRIQGELSIFRATELKQALLA------EPAATEIDLSGVTDIDTAGLQLLMLAKK 62 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSL--ISFTHRKKIKNQKPQRSFFYN 105 + +++L G S + +LF L I+ + P R + Sbjct: 63 HARRSGREVRLVGHSPAVIELFELLHIAGHFGDPMVIDAPARDAPHR 109 >gi|315125514|ref|YP_004067517.1| anti-sigma B factor antagonist [Pseudoalteromonas sp. SM9913] gi|315014027|gb|ADT67365.1| anti-sigma B factor antagonist [Pseudoalteromonas sp. SM9913] Length = 97 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 6/80 (7%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG-AELIMYFME--K 64 R +G I + ++ + + + DLS +T +DT G A LI F E + Sbjct: 13 HLRVSGELTHNSIGN---ERLLNTKRQTEHKTLYFDLSEVTRVDTAGLAWLIHSFTEFKQ 69 Query: 65 YHGKIKLQGVSTHIEQLFSL 84 +++LQ ++ L L Sbjct: 70 QGIRLELQNPPEQLQNLMQL 89 >gi|119855026|ref|YP_935631.1| ABC-type transport system involved in resistance to organic solvents permease component-like protein [Mycobacterium sp. KMS] gi|119697744|gb|ABL94816.1| ABC-type transport system involved in resistance to organic solvents permease component-like protein [Mycobacterium sp. KMS] Length = 206 Score = 50.6 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 42/102 (41%), Gaps = 4/102 (3%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 VK + + + + ++++ FLL Q ++V + + +S Sbjct: 19 VKALKPLSIIGGLYAMTLDMFVAMVKPPFQWREFLL----QTWFVARVSMVPALTLSIPL 74 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 + + L++FGA FS ++ + +IG +T +++ Sbjct: 75 VVLTSFTFNTLLAEFGAADFSGTGAALGAVNQIGPFVTVLVV 116 >gi|52425764|ref|YP_088901.1| hypothetical protein MS1709 [Mannheimia succiniciproducens MBEL55E] gi|52307816|gb|AAU38316.1| unknown [Mannheimia succiniciproducens MBEL55E] Length = 120 Score = 50.2 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 33/101 (32%), Gaps = 13/101 (12%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKS-------IQSDSAIVDLSAITEIDTIG 54 + FR G + + ++ +S I + DLS ++ ID+ G Sbjct: 13 QNDDRIAFRLDGELSRDTLLPLWNEFQKREQRSSFLSERQIADKNISWDLSQVSRIDSAG 72 Query: 55 AELIMYFM------EKYHGKIKLQGVSTHIEQLFSLISFTH 89 L+ + + + L+ V + L L+ Sbjct: 73 FALLCDLLHYCQAKKNADKTLLLENVPPQLLTLADLVGLAD 113 >gi|288960908|ref|YP_003451247.1| ABC transporter related [Azospirillum sp. B510] gi|288913216|dbj|BAI74703.1| ABC transporter related [Azospirillum sp. B510] Length = 500 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 25/245 (10%), Positives = 84/245 (34%), Gaps = 26/245 (10%) Query: 143 CASSYKFKGFLLSLIRQMYYVGVSGVPVV-----ILISFVTGAVIAQQ----GAFQLSQF 193 +F FL L + + +S + ++ LI G + S Sbjct: 260 VGHRSRFHWFLRYLAEYFWELCISPLMLIYMGSGALIMGFVSMWFGFHYNSFGGYLKSLL 319 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 E + + L+++++ R+ + I A++G+ ++ + A++ + + Sbjct: 320 HDETLVGLGLVQATV--AVPLISSILFVARNNAIIAADMGNRVLSSQFSAMQNLRITARG 377 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP------FAVFFSRFHSTATL 307 + S + +++ +L +++ A + + + F Sbjct: 378 YIFSAILINMVVGSLILLVISLGMASWASMQTWHVQFPMQNFELWRGHFFRKLLPDGIHP 437 Query: 308 AN-IFTGLIK----APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + + L+K + CA ++ + + + ++ +++ +++ + Sbjct: 438 STGMLWVLLKVALSSLLAGCAAIVIGCGK----KESVLEINAAIARSIIVGVTLTLLVHA 493 Query: 363 LFAIF 367 + +I Sbjct: 494 IISIL 498 >gi|77361455|ref|YP_341030.1| anti-sigma B factor antagonist [Pseudoalteromonas haloplanktis TAC125] gi|76876366|emb|CAI87588.1| putative anti-sigma B factor antagonist [Pseudoalteromonas haloplanktis TAC125] Length = 97 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 6/80 (7%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG-AELIMYFME--K 64 FR +G I + AI K DLS ++ +DT G A LI F + + Sbjct: 13 HFRVSGELTRSSIGDEKGLGSQAITK---HKICYFDLSDVSRVDTAGLAWLIHTFAQYKQ 69 Query: 65 YHGKIKLQGVSTHIEQLFSL 84 +++LQ ++ L L Sbjct: 70 QGIRLELQNPPEQLQNLMQL 89 >gi|261364832|ref|ZP_05977715.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] gi|288566870|gb|EFC88430.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] Length = 92 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 +G+ ++ AD + D+ VDLS + D+ L++ + + G Sbjct: 9 TLHISGDITVKTLT--ADAFTRFRQQCRLKDTHAVDLSGVGRADSACVSLLLDALRRPDG 66 Query: 68 KIKLQGVSTHIEQLFSLIS 86 KI LQG+ + L L Sbjct: 67 KITLQGIPESVRTLSELYE 85 >gi|260428392|ref|ZP_05782371.1| membrane protein [Citreicella sp. SE45] gi|260422884|gb|EEX16135.1| membrane protein [Citreicella sp. SE45] Length = 83 Score = 49.1 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 31/75 (41%) Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 + ++ + + + +G +PVV + + TG +A Q ++F AE Sbjct: 4 FAARAASHIFRAPFYGREALNALLQIGWLSLPVVGMTALFTGGALALQIYSGGARFSAEA 63 Query: 198 FSIDLMSILQLREIG 212 +++I +R+ Sbjct: 64 VVPQIVAIGMVRDWA 78 >gi|288941305|ref|YP_003443545.1| anti-sigma-factor antagonist [Allochromatium vinosum DSM 180] gi|288896677|gb|ADC62513.1| anti-sigma-factor antagonist [Allochromatium vinosum DSM 180] Length = 108 Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 38/80 (47%), Gaps = 6/80 (7%) Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK-- 68 +G+ ++E + + + + + +DLS ITE+D G +L+++ E + Sbjct: 15 LSGDLTIYTVAETLNRLRPHLGEHPTGE---LDLSGITELDGAGIQLLLWLRETARLRGI 71 Query: 69 -IKLQGVSTHIEQLFSLISF 87 ++L + ++++ L+ Sbjct: 72 TLRLSAHGSVVDEVLDLLQL 91 >gi|255067846|ref|ZP_05319701.1| conserved hypothetical protein [Neisseria sicca ATCC 29256] gi|255047937|gb|EET43401.1| conserved hypothetical protein [Neisseria sicca ATCC 29256] Length = 92 Score = 48.7 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 +G+ ++ A + D+ VDLS + D+ L++ + + +G Sbjct: 9 TLHISGDVTVKTLTAAAFTRFRQQCRL--KDTRAVDLSGVGRADSACVSLLLDALRRPNG 66 Query: 68 KIKLQGVSTHIEQLFSLIS 86 KI LQG+ + L L Sbjct: 67 KISLQGIPESVRTLSELYE 85 >gi|255020162|ref|ZP_05292231.1| hypothetical protein ACA_0899 [Acidithiobacillus caldus ATCC 51756] gi|254970304|gb|EET27797.1| hypothetical protein ACA_0899 [Acidithiobacillus caldus ATCC 51756] Length = 114 Score = 47.9 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 14/97 (14%), Positives = 39/97 (40%), Gaps = 5/97 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 E+ +V R +G+W+ + + + +S+ D +D + D+ L++ + Sbjct: 13 QEDDQSVLRLSGDWRLDALD---EALRSEELRSLAVDRVRLD--DVDAADSATLALLLDW 67 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 E+ + + ++ L L+ + + + P Sbjct: 68 QERALQRKRPLVLTGLGPGLRELVHLYGLEALLTEAP 104 >gi|283853373|ref|ZP_06370620.1| anti-sigma-factor antagonist [Desulfovibrio sp. FW1012B] gi|283571241|gb|EFC19254.1| anti-sigma-factor antagonist [Desulfovibrio sp. FW1012B] Length = 258 Score = 47.5 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 48/99 (48%), Gaps = 9/99 (9%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQS--DSAIVDLSAITEIDTIGAELIMY 60 E+G T+ R AG+ ++ + D++ + + +Q ++DLS + ID++G L++ Sbjct: 164 EDGQTILRPAGD----IVASVTDELRTRLKEIMQGNPGPLVIDLSRVELIDSVGIGLLIA 219 Query: 61 F---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96 + K G++ L+ V+ + L + ++N Sbjct: 220 AHNTLSKKGGRLTLRHVNPDLASLLRTMRLDKHFAVENA 258 >gi|119469176|ref|ZP_01612160.1| putative anti-sigma B factor antagonist [Alteromonadales bacterium TW-7] gi|119447428|gb|EAW28696.1| putative anti-sigma B factor antagonist [Alteromonadales bacterium TW-7] Length = 97 Score = 47.5 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 10/81 (12%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIV--DLSAITEIDTIG-AELIMYF--ME 63 FR +G E+S + +NK +Q+ + DLS ++ +DT G A LI F ++ Sbjct: 14 FRASG-----ELSRNSIGDEQLLNKQLQTKHKTIYFDLSGVSRVDTAGLAWLIHSFAELK 68 Query: 64 KYHGKIKLQGVSTHIEQLFSL 84 + +++LQ ++ L L Sbjct: 69 QQGIRLELQNPPEQLQNLMQL 89 >gi|251793146|ref|YP_003007874.1| hypothetical protein NT05HA_1442 [Aggregatibacter aphrophilus NJ8700] gi|247534541|gb|ACS97787.1| conserved hypothetical protein [Aggregatibacter aphrophilus NJ8700] Length = 119 Score = 47.5 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 24/61 (39%), Gaps = 1/61 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVM-AINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +G + +G + + + + + DL+ IT ID+ G L+ F+ Sbjct: 15 DGKMTLQLSGELSRNTLLPLWQQRASFLLEGQSSGQTILWDLTQITRIDSAGFALLCEFL 74 Query: 63 E 63 + Sbjct: 75 Q 75 >gi|302538621|ref|ZP_07290963.1| anti-sigma factor antagonist [Streptomyces sp. C] gi|302447516|gb|EFL19332.1| anti-sigma factor antagonist [Streptomyces sp. C] Length = 132 Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 11/95 (11%), Positives = 31/95 (32%), Gaps = 3/95 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G +G+ + + V + + + +D +A++ +D+ G ++ + Sbjct: 8 GTGRIELSGDLDHHHAGLLVEAVDRLLAEQPGLRALRLDCAALSAVDSSGLAALLMVRRR 67 Query: 65 ---YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96 + L G + +L + H Sbjct: 68 TDTAGAGLHLDGRPVQLNRLLEITGTLHHLTAPRP 102 >gi|223986125|ref|ZP_03636148.1| hypothetical protein HOLDEFILI_03456 [Holdemania filiformis DSM 12042] gi|223961930|gb|EEF66419.1| hypothetical protein HOLDEFILI_03456 [Holdemania filiformis DSM 12042] Length = 167 Score = 47.2 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 46/87 (52%), Gaps = 4/87 (4%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + ++ +F F G+ + I +I DV+ I++ +Q+ D +T ID+ G ++ Sbjct: 62 IQQDDALIFAFCGDLDNLSILKIKADVIREIDR-VQAPVVKFDFKDVTFIDSTGIGFLLA 120 Query: 61 F---MEKYHGKIKLQGVSTHIEQLFSL 84 ++ Y G++ L+ +S I +LF+L Sbjct: 121 RYNQVQSYRGELILKNISPAIRRLFAL 147 >gi|261868150|ref|YP_003256072.1| putative NTP binding protein, contains STAS domain [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413482|gb|ACX82853.1| putative NTP binding protein, contains STAS domain [Aggregatibacter actinomycetemcomitans D11S-1] Length = 111 Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 30/89 (33%), Gaps = 3/89 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVM-AINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + R G + + + + ++ DLS + ID+ G L+ Sbjct: 13 QHDDKITLRLKGELSQNTLLPLWQQRASFLLARKTETLDVHWDLSQVNRIDSAGFALLCD 72 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 F+ + K LQ + + L L + Sbjct: 73 FLNE--RKQLLQNPPSQLLTLADLFGLSD 99 >gi|167950503|ref|ZP_02537577.1| hypothetical protein Epers_30421 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 50 Score = 46.8 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 15/35 (42%), Positives = 25/35 (71%) Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 LSQFGAE +++ +RE+G ++TA++ AGR+ Sbjct: 2 LSQFGAEESLGVMVAASLVRELGPVVTALLFAGRA 36 >gi|296104904|ref|YP_003615050.1| STAS domain-containing protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059363|gb|ADF64101.1| STAS domain-containing protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 97 Score = 46.4 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 8/80 (10%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EK 64 + +G ++ + D A+ ++DLS +T +DT G L+ + + +K Sbjct: 13 TLKLSGELDQDLLNPLWDKRHDAMQ-----GVTLIDLSGVTRVDTAGVALLAHLIAVGKK 67 Query: 65 YHGKIKLQGVSTHIEQLFSL 84 + L G S ++ L L Sbjct: 68 QGATVTLHGASDNVVTLAQL 87 >gi|152978466|ref|YP_001344095.1| anti-sigma-factor antagonist [Actinobacillus succinogenes 130Z] gi|150840189|gb|ABR74160.1| anti-sigma-factor antagonist [Actinobacillus succinogenes 130Z] Length = 116 Score = 46.4 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 4/91 (4%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAIN-KSIQSDSAIVDLSAITEIDTIGAELIM 59 + + + G + + ++ K I + I DLS IT ID+ G L+ Sbjct: 12 VQNDDRMTLQLIGELSRDTLLPLWRQRFAVLSDKQIAGQNVIFDLSNITRIDSAGFALLC 71 Query: 60 YFM---EKYHGKIKLQGVSTHIEQLFSLISF 87 + K + K + QL +L Sbjct: 72 ELIHHVRKVQERDKGLTIEHAPSQLLTLAEL 102 >gi|88861153|ref|ZP_01135787.1| putative anti-sigma B factor antagonist [Pseudoalteromonas tunicata D2] gi|88816875|gb|EAR26696.1| putative anti-sigma B factor antagonist [Pseudoalteromonas tunicata D2] Length = 97 Score = 46.4 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 6/84 (7%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG-AELIMYF--MEKY 65 F +G ++ I +N + I DLSAI+ +DT G A LI +++ Sbjct: 14 FVLSGELSHETVAAIEFSKKFKLNDVNR---IIFDLSAISRVDTAGLAWLIHTLSELQQQ 70 Query: 66 HGKIKLQGVSTHIEQLFSLISFTH 89 + L+ V +++L L+ + Sbjct: 71 EIHLTLRNVPEQLQKLMQLVQVSQ 94 >gi|254672984|emb|CBA07467.1| conserved hypothetical protein [Neisseria meningitidis alpha275] Length = 100 Score = 46.4 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 +G+ ++ A + D+ VDLS + D+ L++ + G Sbjct: 17 TLHISGDVTVKTLTAAAFTRFRQQCRL--KDTRAVDLSGVGRADSACVSLLLEVLRGCKG 74 Query: 68 KIKLQGVSTHIEQLFSLIS 86 ++L G+ + L L Sbjct: 75 SVRLTGIPESVRALSELYE 93 >gi|226329327|ref|ZP_03804845.1| hypothetical protein PROPEN_03232 [Proteus penneri ATCC 35198] gi|225202513|gb|EEG84867.1| hypothetical protein PROPEN_03232 [Proteus penneri ATCC 35198] Length = 69 Score = 46.4 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 9/58 (15%), Positives = 19/58 (32%), Gaps = 1/58 (1%) Query: 288 KYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 + I F++ ++ IK+ A + +A+ G H L + Sbjct: 2 DWKGIDEGFFWASMQGAVEWRLDLVNCFIKSVVFAITVTWIALLTGMTQSQHQKGLAE 59 >gi|220933921|ref|YP_002512820.1| anti-sigma-factor antagonist [Thioalkalivibrio sp. HL-EbGR7] gi|219995231|gb|ACL71833.1| anti-sigma-factor antagonist [Thioalkalivibrio sp. HL-EbGR7] Length = 111 Score = 46.4 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 40/103 (38%), Gaps = 5/103 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E+ R G ++ + + A VD+SA+ +D+ G L++ ++ Sbjct: 8 ESEGDTLRLHGGLDLATVAGLWSSSQRLFEST--QPPARVDVSAVDRVDSAGVALLVQWV 65 Query: 63 EKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF 102 + ++++G+S + L +L + + + R Sbjct: 66 GMARARGVALRVEGMSPAMGDLIALADLEPLLPVVDDQTARQR 108 >gi|254362422|ref|ZP_04978531.1| hypothetical protein MHA_2029 [Mannheimia haemolytica PHL213] gi|261494091|ref|ZP_05990594.1| putative anti-sigma factor B antagonist [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496068|ref|ZP_05992478.1| putative anti-sigma factor B antagonist [Mannheimia haemolytica serotype A2 str. OVINE] gi|153094011|gb|EDN74927.1| hypothetical protein MHA_2029 [Mannheimia haemolytica PHL213] gi|261308318|gb|EEY09611.1| putative anti-sigma factor B antagonist [Mannheimia haemolytica serotype A2 str. OVINE] gi|261310257|gb|EEY11457.1| putative anti-sigma factor B antagonist [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 107 Score = 46.4 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 30/88 (34%), Gaps = 3/88 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 N + +G + + ++ + + S DL IT ID+ G L+ Sbjct: 12 QNNESLFVKLSGELTRNTLLPLWKQRASFLSPTGK-QSLYWDLKEITRIDSAGFTLLAEL 70 Query: 62 MEKYHGKI--KLQGVSTHIEQLFSLISF 87 + YH I L + L +L Sbjct: 71 LNHYHKIIPNSLINTPDSVRTLAALYDL 98 >gi|261393290|emb|CAX50918.1| conserved hypothetical protein [Neisseria meningitidis 8013] Length = 92 Score = 46.0 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 +G+ ++ A + D+ VDLS + D+ L++ + G Sbjct: 9 TLHISGDITVKTLTAAAFTRFRQQCRL--KDTRAVDLSGVGRADSACVSLLLEVLRGCKG 66 Query: 68 KIKLQGVSTHIEQLFSLIS 86 ++L G+ + L L Sbjct: 67 SVRLTGIPESVRALSELYE 85 >gi|225873833|ref|YP_002755292.1| anti-anti-sigma factor [Acidobacterium capsulatum ATCC 51196] gi|225791854|gb|ACO31944.1| anti-anti-sigma factor [Acidobacterium capsulatum ATCC 51196] Length = 117 Score = 46.0 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 15/102 (14%), Positives = 45/102 (44%), Gaps = 5/102 (4%) Query: 2 SENGITVFRFAGNWK-SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + + + V G+ SP + ++ + + ++ + + D++ + +D+ G ++ Sbjct: 10 ASDELLVITLTGSMTMSPALDQLMEQLYAQLD-TNPPRHIVFDMAGVDYLDSTGLGFLVR 68 Query: 61 F---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 +EK G I+L G S ++ L ++ ++ + + Sbjct: 69 INRDLEKRDGFIRLCGTSERVQALMAMTRTDTLLRVDCDRAE 110 >gi|161869248|ref|YP_001598415.1| hypothetical protein NMCC_0253 [Neisseria meningitidis 053442] gi|218767467|ref|YP_002341979.1| hypothetical protein NMA0489 [Neisseria meningitidis Z2491] gi|254804225|ref|YP_003082446.1| NTP binding protein [Neisseria meningitidis alpha14] gi|304388518|ref|ZP_07370621.1| conserved hypothetical protein [Neisseria meningitidis ATCC 13091] gi|121051475|emb|CAM07768.1| hypothetical protein NMA0489 [Neisseria meningitidis Z2491] gi|161594801|gb|ABX72461.1| conserved hypothetical protein [Neisseria meningitidis 053442] gi|254667767|emb|CBA03701.1| NTP binding protein [Neisseria meningitidis alpha14] gi|304337515|gb|EFM03681.1| conserved hypothetical protein [Neisseria meningitidis ATCC 13091] Length = 100 Score = 46.0 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 +G+ ++ A + D+ VDLS + D+ L++ + G Sbjct: 17 TLHISGDVTVKTLTAAAFTRFRQQCRL--KDTRAVDLSGVGRADSACVSLLLEVLRGCKG 74 Query: 68 KIKLQGVSTHIEQLFSLIS 86 ++L G+ + L L Sbjct: 75 SVRLTGIPESVRALSELYE 93 >gi|325129423|gb|EGC52254.1| hypothetical protein NMBOX9930304_1776 [Neisseria meningitidis OX99.30304] gi|325135553|gb|EGC58171.1| hypothetical protein NMBM0579_1853 [Neisseria meningitidis M0579] gi|325201401|gb|ADY96855.1| conserved hypothetical protein [Neisseria meningitidis M01-240149] gi|325207382|gb|ADZ02834.1| conserved hypothetical protein [Neisseria meningitidis NZ-05/33] Length = 92 Score = 46.0 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 +G+ ++ A + D+ VDLS + D+ L++ + G Sbjct: 9 TLHISGDVTVKTLTAAAFTRFRQQCRL--KDTRAVDLSGVGRADSACVSLLLEVLRGCKG 66 Query: 68 KIKLQGVSTHIEQLFSLIS 86 ++L G+ + L L Sbjct: 67 SVRLTGIPESVRALSELYE 85 >gi|284042296|ref|YP_003392636.1| anti-sigma-factor antagonist [Conexibacter woesei DSM 14684] gi|283946517|gb|ADB49261.1| anti-sigma-factor antagonist [Conexibacter woesei DSM 14684] Length = 132 Score = 46.0 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 37/92 (40%), Gaps = 3/92 (3%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + +GI+V G E+ + + ++ +D +VDLS +D G + ++ Sbjct: 21 LDAHGISVIAVQGELDLFTAPELRERLREHMDDPEPADDLVVDLSGCAFVDASGCQALLR 80 Query: 61 FMEKY---HGKIKLQGVSTHIEQLFSLISFTH 89 + ++ + + ++F+++ Sbjct: 81 AARQLTAVGRRLAIVNTNPGNTRIFTVMGLDE 112 >gi|315633779|ref|ZP_07889069.1| NTP binding protein, contains STAS domain protein [Aggregatibacter segnis ATCC 33393] gi|315477821|gb|EFU68563.1| NTP binding protein, contains STAS domain protein [Aggregatibacter segnis ATCC 33393] Length = 119 Score = 46.0 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 24/61 (39%), Gaps = 1/61 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVM-AINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 N + +G + + + K+ + DLS +T ID+ G L+ F+ Sbjct: 15 NDRITLQLSGELSRNTLLPLWQQRASFLLGKASAEQNIYWDLSQVTRIDSAGFALLCDFL 74 Query: 63 E 63 + Sbjct: 75 Q 75 >gi|160915292|ref|ZP_02077505.1| hypothetical protein EUBDOL_01301 [Eubacterium dolichum DSM 3991] gi|158433091|gb|EDP11380.1| hypothetical protein EUBDOL_01301 [Eubacterium dolichum DSM 3991] Length = 110 Score = 45.6 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 4/85 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 ++GI F F+G+ +S + + + I K Q +D A++ +D+ G ++ Sbjct: 11 QDGILYFYFSGDLDHLHVSRMKEQCIQLIEK-YQPKQVKMDFQAVSFVDSTGIGFVLARY 69 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSL 84 + K+ K+ L +S E+LF + Sbjct: 70 KQLSKFQAKLTLCNLSRANERLFQM 94 >gi|261378132|ref|ZP_05982705.1| conserved hypothetical protein [Neisseria cinerea ATCC 14685] gi|269145592|gb|EEZ72010.1| conserved hypothetical protein [Neisseria cinerea ATCC 14685] Length = 92 Score = 45.6 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 30/80 (37%), Gaps = 4/80 (5%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFMEKYH 66 R +G+ ++ + + + + + VD S + D+ L++ + + Sbjct: 9 TLRVSGDITVKTLT---GEAFERFQQQCRLNGIVAVDFSGVNRADSACVSLLLEILRRRK 65 Query: 67 GKIKLQGVSTHIEQLFSLIS 86 IKL G+ + L L Sbjct: 66 DSIKLTGIPESVRALSELYE 85 >gi|311277836|ref|YP_003940067.1| hypothetical protein Entcl_0505 [Enterobacter cloacae SCF1] gi|308747031|gb|ADO46783.1| hypothetical protein Entcl_0505 [Enterobacter cloacae SCF1] Length = 96 Score = 45.6 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 8/85 (9%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEKY 65 R G I + D A +I+DLS +T +DT G L+++ + Sbjct: 14 LRLQGELDQDVIPPLWDARAEA-----TVGVSILDLSDVTRVDTAGVALLVHFVALIRAQ 68 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHR 90 ++ G S ++ L L + + Sbjct: 69 GKTPEIVGKSEKMQTLVQLYNLSDD 93 >gi|332163076|ref|YP_004299653.1| putative anti-sigma B factor antagonist [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318604044|emb|CBY25542.1| uncharacterized protein YrbB [Yersinia enterocolitica subsp. palearctica Y11] gi|325667306|gb|ADZ43950.1| putative anti-sigma B factor antagonist [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 113 Score = 45.6 bits (107), Expect = 0.014, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 36/105 (34%), Gaps = 8/105 (7%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---K 64 G + + + +D +D+S + +D+ G L+++F E K Sbjct: 13 TLVLQGELDRETLLPLWQQREALL-----ADKTRIDVSQLRRVDSSGLALLVHFRELRNK 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 + + GVS + L L + ++ P + N Sbjct: 68 QGRSLAIIGVSDRLSTLIELYNLRDVIPVETIIPVEAVIPVEANN 112 >gi|325579006|ref|ZP_08148962.1| NTP binding protein, contains STAS domain protein [Haemophilus parainfluenzae ATCC 33392] gi|325159241|gb|EGC71375.1| NTP binding protein, contains STAS domain protein [Haemophilus parainfluenzae ATCC 33392] Length = 111 Score = 45.2 bits (106), Expect = 0.014, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 36/86 (41%), Gaps = 5/86 (5%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFMEKY-- 65 + +G + + +++ + + S I DL+ I ID+ G L+ F+ Sbjct: 17 LQLSGELSRNTLLPLWQQRASFLSEKLANQSTIEFDLTNIKRIDSAGFALLCDFLHDSEQ 76 Query: 66 --HGKIKLQGVSTHIEQLFSLISFTH 89 + K++L + L L++ +H Sbjct: 77 LPNKKVRLINPPEQLLTLADLVNLSH 102 >gi|307129074|ref|YP_003881090.1| hypothetical protein Dda3937_00693 [Dickeya dadantii 3937] gi|306526603|gb|ADM96533.1| predicted protein [Dickeya dadantii 3937] Length = 100 Score = 45.2 bits (106), Expect = 0.015, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 40/98 (40%), Gaps = 10/98 (10%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++G R G+ + + +N DS+++D+ + +D+ G L+++F Sbjct: 9 QDDGA--LRLEGDLDRNTLLPLWQQREALLN-----DSSVLDVGQVARVDSSGLALLVHF 61 Query: 62 ---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96 E+ + + G S + L L + + ++ Sbjct: 62 YHQQEQRGKPLAIIGASDRLRTLIQLYNLSEIIPVRPA 99 >gi|123443931|ref|YP_001007902.1| putative anti-sigma B factor antagonist [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090892|emb|CAL13774.1| putative anti-sigma B factor antagonist [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 107 Score = 45.2 bits (106), Expect = 0.017, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 35/94 (37%), Gaps = 8/94 (8%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---K 64 G + + + +D +D+S + +D+ G L+++F E K Sbjct: 13 TLVLQGELDRETLLPLWQQREALL-----ADKTRIDVSQLRRVDSSGLALLVHFRELRNK 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 G + + GVS + L L + ++ P Sbjct: 68 QGGSLVIIGVSDRLSTLIELYNLRDVIPVETVIP 101 >gi|330862749|emb|CBX72891.1| uncharacterized protein yrbB [Yersinia enterocolitica W22703] Length = 115 Score = 44.8 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 36/105 (34%), Gaps = 8/105 (7%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---K 64 G + + + +D +D+S + +D+ G L+++F E K Sbjct: 15 TLVLQGELDRETLLPLWQQREALL-----ADKTRIDVSQLRRVDSSGLALLVHFRELRNK 69 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 + + GVS + L L + ++ P + N Sbjct: 70 QGRSLAIIGVSDRLSTLIELYNLRDVIPVETIIPVEAVIPVEANN 114 >gi|291450033|ref|ZP_06589423.1| predicted protein [Streptomyces albus J1074] gi|291352982|gb|EFE79884.1| predicted protein [Streptomyces albus J1074] Length = 185 Score = 44.8 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 2/94 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 SE G V + G+ I+ + + A + S +VDLS + D+ + + Sbjct: 77 SEGGGIVVQLGGDLDLENITPLGPALSDA--AATVSGPVVVDLSGVGFADSSTVNVFLQA 134 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKN 95 +++ +S +E+LF LI + Sbjct: 135 YGAIGPRLRFAALSPFVERLFGLIGLQSALPVHE 168 >gi|15677792|ref|NP_274956.1| hypothetical protein NMB1962 [Neisseria meningitidis MC58] gi|7227222|gb|AAF42291.1| hypothetical protein NMB1962 [Neisseria meningitidis MC58] gi|254670839|emb|CBA07268.1| STAS domain protein [Neisseria meningitidis alpha153] gi|308390060|gb|ADO32380.1| hypothetical protein NMBB_2245 [Neisseria meningitidis alpha710] gi|316985590|gb|EFV64537.1| hypothetical protein NMH_0136 [Neisseria meningitidis H44/76] gi|325127425|gb|EGC50356.1| hypothetical protein NMXN1568_1823 [Neisseria meningitidis N1568] gi|325139612|gb|EGC62152.1| hypothetical protein NMBCU385_2035 [Neisseria meningitidis CU385] gi|325201010|gb|ADY96465.1| conserved hypothetical protein [Neisseria meningitidis H44/76] Length = 92 Score = 44.8 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + G+ ++ A + D+ VDLS + D+ L++ + G Sbjct: 9 ILHIGGDITVKTLTAAAFTRFRQQCRL--KDTCAVDLSGVGRADSACVSLLLEVLRGCKG 66 Query: 68 KIKLQGVSTHIEQLFSLIS 86 ++L G+ + L L Sbjct: 67 SVRLTGIPESVRALSELYE 85 >gi|116747919|ref|YP_844606.1| anti-sigma-factor antagonist [Syntrophobacter fumaroxidans MPOB] gi|116696983|gb|ABK16171.1| anti-sigma-factor antagonist [Syntrophobacter fumaroxidans MPOB] Length = 120 Score = 44.8 bits (105), Expect = 0.022, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 36/110 (32%), Gaps = 4/110 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---M 59 E V G + I V++ + K+ +DL+ + +DT G ++ + Sbjct: 8 EEHRPVVELGGVLDRESVPGI-RKVLLRLVKAKGIKDLRIDLAEVERMDTSGVAMLVEVL 66 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 + GK+ L S ++ L + P + + Sbjct: 67 RVLSARKGKVHLTNPSEPATRMIRLARLNGVFEQGASGPLAASGAGPQRR 116 >gi|227358276|ref|ZP_03842617.1| anti-sigma factor antagonist [Proteus mirabilis ATCC 29906] gi|227161612|gb|EEI46649.1| anti-sigma factor antagonist [Proteus mirabilis ATCC 29906] Length = 102 Score = 44.5 bits (104), Expect = 0.024, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 8/85 (9%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 + F G + + K++ +D I+D+S + ID+ G L ++ ME Sbjct: 18 ILSFQGTLDRETLLPVWQQ-----RKALLADINIIDISQLDHIDSTGLALFVHLKAEMEA 72 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89 + +QGVS + L +L Sbjct: 73 LERQCVIQGVSERFQTLITLYDLDE 97 >gi|268612024|ref|ZP_06145751.1| anti-sigma-factor antagonist domain-containing protein [Ruminococcus flavefaciens FD-1] Length = 101 Score = 44.5 bits (104), Expect = 0.025, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 4/86 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59 +ENG +V +G +++ + I S + ++DL IT +D+ G LIM Sbjct: 7 NENGTSVAYISGEIDHHNAADLRSQLDRYIISS-RPSQLVIDLEGITFMDSSGIGLIMGR 65 Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSL 84 M+ G++ + +I ++ L Sbjct: 66 SKLMKTCGGRLSVHSPQPYIRRVLKL 91 >gi|301155767|emb|CBW15235.1| predicted protein [Haemophilus parainfluenzae T3T1] Length = 111 Score = 44.5 bits (104), Expect = 0.027, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 5/86 (5%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFMEKY-- 65 + +G + + +++ + S I DL+ I ID+ G L+ F+ Sbjct: 17 LQLSGELSRNTLLPLWQQRASFLSEKQNNQSLIEFDLTEINRIDSAGFALLCDFLHDCEQ 76 Query: 66 --HGKIKLQGVSTHIEQLFSLISFTH 89 + K++L + L L++ +H Sbjct: 77 LPNKKVRLINPPEQLLTLADLVNLSH 102 >gi|255604967|ref|XP_002538316.1| conserved hypothetical protein [Ricinus communis] gi|223512772|gb|EEF24067.1| conserved hypothetical protein [Ricinus communis] Length = 187 Score = 44.5 bits (104), Expect = 0.030, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 40/95 (42%), Gaps = 6/95 (6%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59 S+ G +E+ ++ A+ D+ +DLS +TE D G +L++ Sbjct: 91 SQGAAACLAVEGEMTIYRAAELHPVLLDAVR---THDAPALDLSDVTEFDCAGMQLLLVA 147 Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 ++ ++ L+G S + F+++ T + Sbjct: 148 RREAQRLGKQLVLRGASPAVRDAFAMLGMTDDGEP 182 >gi|126175853|ref|YP_001052002.1| SpoIIAA family protein [Shewanella baltica OS155] gi|152999235|ref|YP_001364916.1| SpoIIAA family protein [Shewanella baltica OS185] gi|160873848|ref|YP_001553164.1| SpoIIAA family protein [Shewanella baltica OS195] gi|217971908|ref|YP_002356659.1| SpoIIAA family protein [Shewanella baltica OS223] gi|125999058|gb|ABN63133.1| SpoIIAA family protein [Shewanella baltica OS155] gi|151363853|gb|ABS06853.1| SpoIIAA family protein [Shewanella baltica OS185] gi|160859370|gb|ABX47904.1| SpoIIAA family protein [Shewanella baltica OS195] gi|217497043|gb|ACK45236.1| SpoIIAA family protein [Shewanella baltica OS223] gi|315266075|gb|ADT92928.1| SpoIIAA family protein [Shewanella baltica OS678] Length = 94 Score = 44.5 bits (104), Expect = 0.031, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 33/85 (38%), Gaps = 4/85 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 TV G ++ + + +S Q I+ LS + D+ G ++ + Sbjct: 6 QQGTVCHLKGRITQADVITLWPQRQQLLGESTQ----ILSLSGLEYSDSAGMAFLLALVR 61 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFT 88 ++ +++L S +++L L Sbjct: 62 EHGSQLELSSASPQLKKLIDLYDLH 86 >gi|54307968|ref|YP_128988.1| hypothetical protein PBPRA0773 [Photobacterium profundum SS9] gi|46912394|emb|CAG19186.1| Hypothetical protein PBPRA0773 [Photobacterium profundum SS9] Length = 103 Score = 44.1 bits (103), Expect = 0.033, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 40/90 (44%), Gaps = 6/90 (6%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFMEKY 65 G ++E+ ++ ++ ++ S + DL+ ++E+DT G +L+ K Sbjct: 16 LSLTGEMSIYSVTELKPRLLAYLH---ENQSVLFDLTEVSEMDTAGIQLLWLCHQEAAKV 72 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKN 95 + + G+S+ + +L+ + ++ Sbjct: 73 GKALAISGISSAALEAITLLRLERQFNLQP 102 >gi|291439807|ref|ZP_06579197.1| predicted protein [Streptomyces ghanaensis ATCC 14672] gi|291342702|gb|EFE69658.1| predicted protein [Streptomyces ghanaensis ATCC 14672] Length = 295 Score = 44.1 bits (103), Expect = 0.034, Method: Composition-based stats. Identities = 12/114 (10%), Positives = 33/114 (28%), Gaps = 6/114 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E + G +A+ + + + D +D+S + +DT G E + Sbjct: 93 EADRALLVPRGELVRGCAHALAEKLARLPADTARVD---LDMSGVHFMDTAGLEFLDVLR 149 Query: 63 ---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYH 113 + + + ++ L ++ P+ + + Sbjct: 150 DHGRRRSVPVTATRWNGQPRRILELAGLDTADPLRRPAPEGASARAASAVSLER 203 >gi|319409729|emb|CBY90035.1| conserved hypothetical protein [Neisseria meningitidis WUE 2594] Length = 92 Score = 44.1 bits (103), Expect = 0.035, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + G+ ++ A + D+ VDLS + D+ L++ + G Sbjct: 9 ILHIGGDITVKTLTAAAFTRFRQQCRL--KDTRAVDLSGVGRADSACVSLLLEVLRGCKG 66 Query: 68 KIKLQGVSTHIEQLFSLIS 86 ++L G+ + L L Sbjct: 67 SVRLTGIPESVRALSELYE 85 >gi|269124391|ref|YP_003297761.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183] gi|268309349|gb|ACY95723.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183] Length = 110 Score = 44.1 bits (103), Expect = 0.035, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 38/102 (37%), Gaps = 5/102 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S+ V G + + I ++D +VDLS + D+ G +++ Sbjct: 9 SQGDYAVVTATGELDLYTAPRLQTALASLIRD--RADRVVVDLSGVEFCDSTGVNVLLAA 66 Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100 M++ G ++L G+ + ++ + I P R Sbjct: 67 MKRLQEQGGTLELAGLRPPVRRILQVTGLDSVFTIAEAVPTR 108 >gi|302542614|ref|ZP_07294956.1| putative STAS domain protein [Streptomyces hygroscopicus ATCC 53653] gi|302460232|gb|EFL23325.1| putative STAS domain protein [Streptomyces himastatinicus ATCC 53653] Length = 116 Score = 44.1 bits (103), Expect = 0.035, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 33/93 (35%), Gaps = 5/93 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G+TV AG I+ + ++DL +T +D G L+ Sbjct: 16 GGVTVAEIAGELDIFAAGRISARLDSL--ARTGCPDLVLDLRQVTFLDCAGVSLLCRLRN 73 Query: 64 K---YHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 + G+++L V +L ++ ++ Sbjct: 74 RVLEREGRLRLVIVDPRFLRLLRMVRLEDAFEV 106 >gi|170728554|ref|YP_001762580.1| anti-sigma-factor antagonist [Shewanella woodyi ATCC 51908] gi|169813901|gb|ACA88485.1| anti-sigma-factor antagonist [Shewanella woodyi ATCC 51908] Length = 100 Score = 44.1 bits (103), Expect = 0.035, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 4/84 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 ++ +G EI + +N+ ++ ++DLS ++ D+ G I+ M Sbjct: 6 QQGSICHISGRLSQEEIPALWLRRKSLLNREVE----VIDLSELSYSDSAGIAFILELMS 61 Query: 64 KYHGKIKLQGVSTHIEQLFSLISF 87 + + ++ EQL LI Sbjct: 62 VARAEKRSLSFTSASEQLSKLIDL 85 >gi|89899708|ref|YP_522179.1| anti-sigma-factor antagonist domain-containing protein [Rhodoferax ferrireducens T118] gi|89344445|gb|ABD68648.1| anti-sigma-factor antagonist (STAS) domain protein [Rhodoferax ferrireducens T118] Length = 121 Score = 44.1 bits (103), Expect = 0.036, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 9/88 (10%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60 N +V R G +E+ ++ + + +DLS +TE+DT G +L+M Sbjct: 9 NEPSVLRIEGELTIFRAAELKPLLLA------EPMAQAIDLSGVTELDTAGVQLLMLAKK 62 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFT 88 K+ L S + ++F L++ Sbjct: 63 MALATQRKLSLVAHSPAVIEVFELLNLA 90 >gi|239926897|ref|ZP_04683850.1| putative anti-sigma factor antagonist [Streptomyces ghanaensis ATCC 14672] gi|291435243|ref|ZP_06574633.1| anti-sigma factor antagonist [Streptomyces ghanaensis ATCC 14672] gi|291338138|gb|EFE65094.1| anti-sigma factor antagonist [Streptomyces ghanaensis ATCC 14672] Length = 119 Score = 44.1 bits (103), Expect = 0.036, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 6/89 (6%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G V +G + + V A ++DLS +T D+ G +++ Sbjct: 17 SGPYVLEVSGELDHHTAHSLTEAVDEA---PFDDHGVVLDLSGLTYCDSTGITVLITAYR 73 Query: 64 K---YHGKIKLQGVSTHIEQLFSLISFTH 89 + + L GVS ++F ++ Sbjct: 74 RSQATGSPLSLAGVSPDQMRVFQVVGLDQ 102 >gi|304411201|ref|ZP_07392816.1| SpoIIAA family protein [Shewanella baltica OS183] gi|307306496|ref|ZP_07586239.1| SpoIIAA family protein [Shewanella baltica BA175] gi|304350394|gb|EFM14797.1| SpoIIAA family protein [Shewanella baltica OS183] gi|306910787|gb|EFN41215.1| SpoIIAA family protein [Shewanella baltica BA175] Length = 94 Score = 44.1 bits (103), Expect = 0.039, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 33/85 (38%), Gaps = 4/85 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 TV G ++ + + +S Q I+ LS + D+ G ++ + Sbjct: 6 QQGTVCHLKGRITQADVITLWPRRQQLLGESTQ----ILSLSGLEYSDSAGMAFLLALVR 61 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFT 88 ++ +++L S +++L L Sbjct: 62 EHGSQLELSSASPQLKKLIDLYDLH 86 >gi|4580940|gb|AAD24545.1| YrbE1B [Mycobacterium leprae] Length = 106 Score = 44.1 bits (103), Expect = 0.040, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 45/110 (40%), Gaps = 11/110 (10%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + I+D + + G + +++ L LI Q+ +G + VV + + Sbjct: 1 AARGIDDIGQMSWFG---LIALGNIPNALSRYRKETLRLIAQIG-MGTGAMAVVGGTAAI 56 Query: 178 TGAV-------IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 G V +A QG L G E F+ +++ +R ++T +++ Sbjct: 57 VGFVTLSGSSLVAIQGFASLGAIGVEAFTGFFAALINVRIAAPVITGIVM 106 >gi|332038538|gb|EGI74981.1| putative anti-sigma B factor antagonist [Pseudoalteromonas haloplanktis ANT/505] Length = 97 Score = 43.7 bits (102), Expect = 0.043, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 6/76 (7%) Query: 12 AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG-AELIMYF--MEKYHGK 68 +G I D+ ++ + DLS ++ +DT G A LI F +++ + Sbjct: 17 SGELTRNSIG---DEQLLNNKLLTKHKIIYFDLSGVSRVDTAGLAWLIHSFAELKQQGIR 73 Query: 69 IKLQGVSTHIEQLFSL 84 ++LQ + ++ L L Sbjct: 74 LELQNLPEQLQNLMQL 89 >gi|197287462|ref|YP_002153334.1| anti-sigma factor antagonist [Proteus mirabilis HI4320] gi|194684949|emb|CAR47142.1| putative anti-sigma factor antagonist [Proteus mirabilis HI4320] Length = 97 Score = 43.7 bits (102), Expect = 0.044, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 8/85 (9%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 + F G + + K++ +D I+D+S + ID+ G L ++ ME Sbjct: 13 ILSFQGTLDRETLLPVWQQ-----RKALLADINIIDISQLDHIDSTGLALFVHLKAEMEA 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89 + +QGVS + L +L Sbjct: 68 LERQCVIQGVSERFQTLITLYDLDE 92 >gi|302867297|ref|YP_003835934.1| sulfate transporter/antisigma-factor antagonist STAS [Micromonospora aurantiaca ATCC 27029] gi|302570156|gb|ADL46358.1| Sulfate transporter/antisigma-factor antagonist STAS [Micromonospora aurantiaca ATCC 27029] Length = 123 Score = 43.7 bits (102), Expect = 0.045, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 29/95 (30%), Gaps = 2/95 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + G R AG E+ D V + +D + + D+ G ++ Sbjct: 22 DAGSARVRLAGELDFDTAPELVDAVADL--RRDGHQELELDFAGVDLCDSSGLSALVVIH 79 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97 G I+L ++ I L Q+ Sbjct: 80 RAGTGAIRLLNLNPQIRHLLDRTGLAELLAAPPQE 114 >gi|297157353|gb|ADI07065.1| putative anti-anti-sigma-factor [Streptomyces bingchenggensis BCW-1] Length = 130 Score = 43.7 bits (102), Expect = 0.049, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 36/93 (38%), Gaps = 5/93 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G+TV G + I+ + ++ + ++DL +T +D G L+ Sbjct: 16 GGVTVAEITGELDIFAAARISPRLDSLAREA--RPNLVLDLRMVTFLDCAGVSLLCRLRN 73 Query: 64 KY---HGKIKLQGVSTHIEQLFSLISFTHRKKI 93 + G+++L V +L ++ ++ Sbjct: 74 RALERGGRLRLVIVDPRFTRLLRMVRLEDAFEV 106 >gi|227326641|ref|ZP_03830665.1| hypothetical protein PcarcW_04679 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 100 Score = 43.7 bits (102), Expect = 0.049, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 35/85 (41%), Gaps = 7/85 (8%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK-- 64 + G+ + +S+ + +D+S + +D+ G L+M+ ++ Sbjct: 16 STLALTGDLDRETLLPFWQQ-----RESLLAGKTTLDVSGLNRVDSAGLALLMHVYQQPS 70 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89 G+I + G S ++ L +L + Sbjct: 71 SGGEITIVGASDRLKTLIALYNLNE 95 >gi|297196319|ref|ZP_06913717.1| anti-sigma factor antagonist [Streptomyces pristinaespiralis ATCC 25486] gi|197722897|gb|EDY66805.1| anti-sigma factor antagonist [Streptomyces pristinaespiralis ATCC 25486] Length = 132 Score = 43.7 bits (102), Expect = 0.051, Method: Composition-based stats. Identities = 9/86 (10%), Positives = 35/86 (40%), Gaps = 5/86 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY- 60 V +G + + + + ++ + +VD + + D+ G ++++ Sbjct: 26 QRGDTVVLSLSGELDHDTAAPLREAIEEHLHA--GAKRLVVDCAGLDFCDSTGLNVLLHG 83 Query: 61 --FMEKYHGKIKLQGVSTHIEQLFSL 84 ++ +++L G+ + ++F + Sbjct: 84 RLAAQETDARVELAGLRPPVARMFEI 109 >gi|227112744|ref|ZP_03826400.1| hypothetical protein PcarbP_07269 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 96 Score = 43.7 bits (102), Expect = 0.051, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 36/89 (40%), Gaps = 7/89 (7%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + + G+ + +S+ + +D+S + +D+ G L+M+ Sbjct: 8 QAQESTLALTGDLDRETLLPFWQQ-----RESLLAGKTTLDVSGLNRVDSAGLALLMHVY 62 Query: 63 EK--YHGKIKLQGVSTHIEQLFSLISFTH 89 ++ G+I + G S ++ L +L + Sbjct: 63 QQPSSGGEITIVGASDRLKTLIALYNLNE 91 >gi|294634667|ref|ZP_06713200.1| putative STAS domain protein [Edwardsiella tarda ATCC 23685] gi|291091913|gb|EFE24474.1| putative STAS domain protein [Edwardsiella tarda ATCC 23685] Length = 100 Score = 43.7 bits (102), Expect = 0.053, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 6/85 (7%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 T+ R G + E A+ + I +D+S +T +D+ G L+++ Sbjct: 12 GTILRLHGELVCDALGEFWRQ-RQALFQGIN----CLDISGVTRVDSAGLALLLHVQNLC 66 Query: 66 HG-KIKLQGVSTHIEQLFSLISFTH 89 G + L+GVS + L +L + Sbjct: 67 PGTPLPLRGVSDRLHTLIALYNLHE 91 >gi|289207567|ref|YP_003459633.1| anti-sigma-factor antagonist [Thioalkalivibrio sp. K90mix] gi|288943198|gb|ADC70897.1| anti-sigma-factor antagonist [Thioalkalivibrio sp. K90mix] Length = 108 Score = 43.3 bits (101), Expect = 0.053, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 2/79 (2%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 +G + + + + VDL +T ID+ G L++ + H + Sbjct: 13 LALSGTLTFATVPGLESRIRALLAGL--PARTRVDLGEVTRIDSAGVALLVTLWRRVHEQ 70 Query: 69 IKLQGVSTHIEQLFSLISF 87 G + + L L+ Sbjct: 71 GGELGFHSIPQGLVPLVEL 89 >gi|271968053|ref|YP_003342249.1| anti-sigma-factor antagonist [Streptosporangium roseum DSM 43021] gi|270511228|gb|ACZ89506.1| anti-sigma-factor antagonist [Streptosporangium roseum DSM 43021] Length = 123 Score = 43.3 bits (101), Expect = 0.054, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 41/104 (39%), Gaps = 5/104 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA---ELIMYFM 62 + V +G+ ++ D+ A+ + ++DL+ + D+ G I + Sbjct: 20 VPVIALSGDLDFTNAEQLRADIQAAL--TPDHRDLVLDLTGLDFCDSTGIRIFLAIRKLL 77 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106 ++ G + L G+++ + ++F L H ++ S Sbjct: 78 QERGGAVALTGLNSRLTRIFRLTGLVHAFTVQPTAADAVTLLRS 121 >gi|119896700|ref|YP_931913.1| STAS domain-containing protein [Azoarcus sp. BH72] gi|119669113|emb|CAL93026.1| putative STAS domain protein [Azoarcus sp. BH72] Length = 102 Score = 43.3 bits (101), Expect = 0.055, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 33/85 (38%), Gaps = 3/85 (3%) Query: 19 EISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFMEKYHGKIKLQGVS 75 I A+ + Q+D +DLSA+ EIDT G +L++ ++ + ++ S Sbjct: 16 TIYHAAEQKQQLVAALAQADELQIDLSAVAEIDTAGFQLLILVKREAQRLGKRARIVAHS 75 Query: 76 THIEQLFSLISFTHRKKIKNQKPQR 100 + ++ + P Sbjct: 76 AAVREVVDFFNMAAEFGDPMLMPAP 100 >gi|50119259|ref|YP_048426.1| hypothetical protein ECA0299 [Pectobacterium atrosepticum SCRI1043] gi|49609785|emb|CAG73219.1| conserved hypothetical protein [Pectobacterium atrosepticum SCRI1043] Length = 96 Score = 43.3 bits (101), Expect = 0.056, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 35/85 (41%), Gaps = 7/85 (8%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK-- 64 + G+ + +S+ + +D+S + +D+ G L+M+ ++ Sbjct: 12 STLALTGDLDRETLLPFWQQ-----RESLLAGKTTLDVSGLNRVDSAGLALLMHVYQQPS 66 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89 G+I + G S ++ L +L + Sbjct: 67 SGGEIAIVGASDRLKTLIALYNLNE 91 >gi|127511049|ref|YP_001092246.1| hypothetical protein Shew_0115 [Shewanella loihica PV-4] gi|126636344|gb|ABO21987.1| hypothetical protein Shew_0115 [Shewanella loihica PV-4] Length = 99 Score = 43.3 bits (101), Expect = 0.056, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 6/80 (7%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEKY 65 R A I ++ D+ + S D+ +D S +T +DT GA+L+ + + + Sbjct: 6 IRLASELTIRNIQQVHHDIAEQLTAS---DTLCIDASQLTRVDTSGAQLLYFLHHYCQTH 62 Query: 66 HGKIKLQGVSTHIEQLFSLI 85 H I+ + +E + + Sbjct: 63 HHAIEWTPPAEEVEHTLAEL 82 >gi|118581090|ref|YP_902340.1| hypothetical protein Ppro_2679 [Pelobacter propionicus DSM 2379] gi|118503800|gb|ABL00283.1| hypothetical protein Ppro_2679 [Pelobacter propionicus DSM 2379] Length = 130 Score = 43.3 bits (101), Expect = 0.058, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 45/120 (37%), Gaps = 4/120 (3%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDV-VMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 +S +G T G+W + + + + S ++ +D + I ID G +++ Sbjct: 2 VSYDGRTRVTLWGHWDLSSVIRQIELLSALRQLGSGGAERYSIDCAGIGSIDREGLQVLH 61 Query: 60 YFME--KYHG-KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116 +M+ + HG K +L + + + + +P R + +G+ Sbjct: 62 VWMQCARLHGLKPELSNLPAGMLETIQRLGLERCFADFYAEPAREMPKDEILAYFSPLGE 121 >gi|240948312|ref|ZP_04752698.1| hypothetical protein AM305_05649 [Actinobacillus minor NM305] gi|240297351|gb|EER47892.1| hypothetical protein AM305_05649 [Actinobacillus minor NM305] Length = 109 Score = 43.3 bits (101), Expect = 0.059, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 24/63 (38%), Gaps = 1/63 (1%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + N V +G + + ++ + ++ DL AI+ ID+ G L+ Sbjct: 12 LHNNESLVVELSGELTRDTLLPLWKQRASFLS-TRKNQHIYWDLKAISRIDSAGFVLLTE 70 Query: 61 FME 63 + Sbjct: 71 LLH 73 >gi|223041899|ref|ZP_03612085.1| hypothetical protein AM202_0495 [Actinobacillus minor 202] gi|223017315|gb|EEF15740.1| hypothetical protein AM202_0495 [Actinobacillus minor 202] Length = 109 Score = 43.3 bits (101), Expect = 0.059, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 24/63 (38%), Gaps = 1/63 (1%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + N V +G + + ++ + ++ DL AI+ ID+ G L+ Sbjct: 12 LHNNESLVVELSGELTRDTLLPLWKQRASFLS-TRKNQHIYWDLKAISRIDSAGFVLLTE 70 Query: 61 FME 63 + Sbjct: 71 LLH 73 >gi|307330897|ref|ZP_07610030.1| anti-sigma-factor antagonist [Streptomyces violaceusniger Tu 4113] gi|306883438|gb|EFN14491.1| anti-sigma-factor antagonist [Streptomyces violaceusniger Tu 4113] Length = 150 Score = 43.3 bits (101), Expect = 0.059, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 33/93 (35%), Gaps = 5/93 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G+TV AG I + I + ++DL +T +D G L+ Sbjct: 36 GGVTVAEIAGELDIFAAGRIVARLDSLI--QARCPDLVLDLRPVTFLDCAGLSLLCRLRN 93 Query: 64 K---YHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 + G+++L +L ++ ++ Sbjct: 94 RVLERDGRLRLVIDEPRFVRLLRMVRLDDAFEV 126 >gi|326775062|ref|ZP_08234327.1| anti-anti-sigma factor [Streptomyces cf. griseus XylebKG-1] gi|326655395|gb|EGE40241.1| anti-anti-sigma factor [Streptomyces cf. griseus XylebKG-1] Length = 120 Score = 43.3 bits (101), Expect = 0.060, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 38/92 (41%), Gaps = 2/92 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 E G V +G+ ++ + D+ +A S +VDLS + D+ +++ Sbjct: 17 QERGALVLTVSGDLDIDSVAPL--DLALASAADDGSGPVVVDLSGVGFADSTTVNVLLQG 74 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 G+++L S +++L +I + Sbjct: 75 NTALGGRLRLAAPSPFMQRLIGMIGLDSALPV 106 >gi|254381137|ref|ZP_04996502.1| hypothetical protein SSAG_00804 [Streptomyces sp. Mg1] gi|194340047|gb|EDX21013.1| hypothetical protein SSAG_00804 [Streptomyces sp. Mg1] Length = 109 Score = 43.3 bits (101), Expect = 0.061, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 34/86 (39%), Gaps = 6/86 (6%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S+ G T G + + I + + +DL+ +T ID+ G +++ Sbjct: 12 SQPGHTTITLTGELDLDT-NPLVTQATDPIA--LARHTLTLDLTGVTFIDSTGLTMLLRL 68 Query: 62 MEKYH---GKIKLQGVSTHIEQLFSL 84 ++ + G ++L G LF L Sbjct: 69 RQRVNTEAGHLELHGARDQALNLFEL 94 >gi|182434535|ref|YP_001822254.1| putative anti-sigma factor antagonist [Streptomyces griseus subsp. griseus NBRC 13350] gi|178463051|dbj|BAG17571.1| putative anti-sigma factor antagonist [Streptomyces griseus subsp. griseus NBRC 13350] Length = 123 Score = 43.3 bits (101), Expect = 0.062, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 37/92 (40%), Gaps = 2/92 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 E G V +G+ ++ + D+ +A S +VDLS + D+ +++ Sbjct: 20 QERGALVLTVSGDLDIDSVAPL--DLALASAADDGSGPVVVDLSGVGFADSTTVNVLLQG 77 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 G+++L S + +L +I + Sbjct: 78 NTALGGRLRLAAPSPFMRRLIGMIGLDSALPV 109 >gi|228962766|ref|ZP_04124032.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar pakistani str. T13001] gi|228796919|gb|EEM44263.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar pakistani str. T13001] Length = 106 Score = 43.3 bits (101), Expect = 0.066, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 5/86 (5%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 F G + + + + I + S ++D+S +T +D+ G + M ++K Sbjct: 13 TYTFVLTGELDA-HYAPVLKKQLDTILEQGHSH-IVLDVSRVTYMDSTGLGVCMGLLKKV 70 Query: 66 H---GKIKLQGVSTHIEQLFSLISFT 88 H G +++ GVS+ I++LF L FT Sbjct: 71 HKQDGFLEVTGVSSRIQRLFDLTGFT 96 >gi|269126279|ref|YP_003299649.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183] gi|268311237|gb|ACY97611.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183] Length = 126 Score = 43.3 bits (101), Expect = 0.069, Method: Composition-based stats. Identities = 15/108 (13%), Positives = 36/108 (33%), Gaps = 5/108 (4%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + +G G + A++++ VDL +T D G +++ Sbjct: 21 VGADGRVTIAIRGEMDLASAGSLYRRARAALSEA--DGDVRVDLGGVTFCDAQGLSVLVR 78 Query: 61 F---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105 ++ G++ L+ V ++ +L + R + P Sbjct: 79 IANDAQRQGGRVLLERVPPNVARLLRITGLDRRFPMSAGAPSIPEPLG 126 >gi|285017152|ref|YP_003374863.1| anti-sigma factor antagonist transcription regulator protein [Xanthomonas albilineans GPE PC73] gi|283472370|emb|CBA14875.1| hypothetical anti-sigma factor antagonist transcription regulator protein [Xanthomonas albilineans] Length = 127 Score = 42.9 bits (100), Expect = 0.073, Method: Composition-based stats. Identities = 12/91 (13%), Positives = 34/91 (37%), Gaps = 5/91 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--- 58 +++ +G + + + + + I + ++DLS + I + G I Sbjct: 11 AQDKRQRITLSGRLDTHTYQTLDEALAPLLATPIT--TLVLDLSQLDYISSAGIRSIFKA 68 Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 + G++ + + I ++F L+ Sbjct: 69 RKLLAARDGQVLVVNPAPQIRKVFDLVKAVP 99 >gi|148976137|ref|ZP_01812880.1| anti-anti-sigma regulatory factor [Vibrionales bacterium SWAT-3] gi|145964532|gb|EDK29786.1| anti-anti-sigma regulatory factor [Vibrionales bacterium SWAT-3] Length = 109 Score = 42.9 bits (100), Expect = 0.077, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 40/101 (39%), Gaps = 6/101 (5%) Query: 6 ITVFRFA--GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 T + G+ + S A + + + VD S + +D+ G I+Y + Sbjct: 10 TTTLTLSIFGDLDAAG-SRDAQTDIDDVISNDGHQEIEVDFSQVEFLDSSGVGAIVYMFK 68 Query: 64 KY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 + ++L+ VS ++ +L+ H + ++ P S Sbjct: 69 RLTERERDMRLENVSGQPLEIMNLLRIGHAIPVNSKNPTNS 109 >gi|258654237|ref|YP_003203393.1| anti-sigma-factor antagonist [Nakamurella multipartita DSM 44233] gi|258557462|gb|ACV80404.1| anti-sigma-factor antagonist [Nakamurella multipartita DSM 44233] Length = 136 Score = 42.9 bits (100), Expect = 0.080, Method: Composition-based stats. Identities = 15/107 (14%), Positives = 39/107 (36%), Gaps = 4/107 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDS-AIVDLSAITEIDTIGAELIMYFM 62 T+ R G + E +A ++ + +DLS ++ +D G E+++ Sbjct: 30 GAGTLVRIVGRLDAREAPRVARELAAVNRLPRRGPPRLTLDLSGVSYLDDTGLEVLLQLQ 89 Query: 63 EKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106 ++ G+++LQ + + +L ++ + Sbjct: 90 DRLAAQGGELELQSPTAAVVRLLHEAHLHGAAGLRAPARELRPPTGP 136 >gi|256379100|ref|YP_003102760.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827] gi|255923403|gb|ACU38914.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827] Length = 108 Score = 42.9 bits (100), Expect = 0.081, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 9/90 (10%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY-- 65 V G + + ++D + + I +VDL+ +T +DT G L++ + + Sbjct: 15 VVVVTGELDADTVPVLSDHLEETPARRI-----VVDLAGVTFMDTTGLSLVLDWHRRLVD 69 Query: 66 --HGKIKLQGVSTHIEQLFSLISFTHRKKI 93 G +L + + +LF L +I Sbjct: 70 TGAGDFRLASLQPSVHKLFRLTELVDVMRI 99 >gi|239908932|ref|YP_002955674.1| anti-sigma factor antagonist family protein [Desulfovibrio magneticus RS-1] gi|239798799|dbj|BAH77788.1| anti-sigma factor antagonist family protein [Desulfovibrio magneticus RS-1] Length = 259 Score = 42.9 bits (100), Expect = 0.081, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 5/87 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF-- 61 +G TV AG+ + + + V + +DLS + ID++G L++ Sbjct: 166 DGRTVLTPAGDIVASAADGLRNAVKDLLPGL--DGPFAMDLSKVELIDSVGIGLLIAVHN 223 Query: 62 -MEKYHGKIKLQGVSTHIEQLFSLISF 87 + K G++ L VS + L + Sbjct: 224 SLSKKGGRLALDHVSPDLAALLRTMRL 250 >gi|152972115|ref|YP_001337261.1| hypothetical protein KPN_03601 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|262042750|ref|ZP_06015904.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|150956964|gb|ABR78994.1| hypothetical protein KPN_03601 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|259039975|gb|EEW41092.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 96 Score = 42.9 bits (100), Expect = 0.081, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 8/80 (10%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EK 64 G + + + A + +AI+DLS T +DT G L+++FM + Sbjct: 13 TLALHGELDQDLLVPLWEARAQA-----TAGTAIIDLSQTTRVDTAGLALLVHFMALIRR 67 Query: 65 YHGKIKLQGVSTHIEQLFSL 84 + +L G S +++ L L Sbjct: 68 QGREAQLVGKSENLQTLIGL 87 >gi|22124062|ref|NP_667485.1| hypothetical protein y0142 [Yersinia pestis KIM 10] gi|45443557|ref|NP_995096.1| putative anti-sigma B factor antagonist [Yersinia pestis biovar Microtus str. 91001] gi|51597807|ref|YP_071998.1| anti-sigma B factor antagonist [Yersinia pseudotuberculosis IP 32953] gi|108809723|ref|YP_653639.1| putative anti-sigma B factor antagonist [Yersinia pestis Antiqua] gi|108813613|ref|YP_649380.1| anti-sigma B factor antagonist [Yersinia pestis Nepal516] gi|145597642|ref|YP_001161718.1| anti-sigma B factor antagonist [Yersinia pestis Pestoides F] gi|153947165|ref|YP_001399445.1| anti-anti-sigma factor [Yersinia pseudotuberculosis IP 31758] gi|153997346|ref|ZP_02022446.1| putative anti-sigma B factor antagonist [Yersinia pestis CA88-4125] gi|162420439|ref|YP_001605688.1| putative anti-anti-sigma factor [Yersinia pestis Angola] gi|165928100|ref|ZP_02223932.1| putative anti-anti-sigma factor [Yersinia pestis biovar Orientalis str. F1991016] gi|165937544|ref|ZP_02226107.1| putative anti-anti-sigma factor [Yersinia pestis biovar Orientalis str. IP275] gi|166011338|ref|ZP_02232236.1| putative anti-anti-sigma factor [Yersinia pestis biovar Antiqua str. E1979001] gi|166212160|ref|ZP_02238195.1| putative anti-anti-sigma factor [Yersinia pestis biovar Antiqua str. B42003004] gi|167400702|ref|ZP_02306211.1| putative anti-anti-sigma factor [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420516|ref|ZP_02312269.1| putative anti-anti-sigma factor [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426997|ref|ZP_02318750.1| putative anti-anti-sigma factor [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470185|ref|ZP_02334889.1| putative anti-anti-sigma factor [Yersinia pestis FV-1] gi|170022767|ref|YP_001719272.1| putative anti-sigma B factor antagonist [Yersinia pseudotuberculosis YPIII] gi|186896999|ref|YP_001874111.1| anti-sigma B factor antagonist [Yersinia pseudotuberculosis PB1/+] gi|218930583|ref|YP_002348458.1| putative anti-sigma B factor antagonist [Yersinia pestis CO92] gi|229836873|ref|ZP_04457038.1| hypothetical protein YPS_0770 [Yersinia pestis Pestoides A] gi|229839227|ref|ZP_04459386.1| hypothetical protein YPH_1508 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229899792|ref|ZP_04514933.1| hypothetical protein YPF_4291 [Yersinia pestis biovar Orientalis str. India 195] gi|229904107|ref|ZP_04519218.1| hypothetical protein YP516_3926 [Yersinia pestis Nepal516] gi|270488542|ref|ZP_06205616.1| anti-anti-sigma factor [Yersinia pestis KIM D27] gi|294505307|ref|YP_003569369.1| putative anti-sigma B factor antagonist [Yersinia pestis Z176003] gi|21956809|gb|AAM83736.1|AE013614_10 hypothetical protein y0142 [Yersinia pestis KIM 10] gi|45438426|gb|AAS63973.1| putative anti-sigma B factor antagonist [Yersinia pestis biovar Microtus str. 91001] gi|51591089|emb|CAH22753.1| Putative anti-sigma B factor antagonist [Yersinia pseudotuberculosis IP 32953] gi|108777261|gb|ABG19780.1| anti-sigma B factor antagonist [Yersinia pestis Nepal516] gi|108781636|gb|ABG15694.1| putative anti-sigma B factor antagonist [Yersinia pestis Antiqua] gi|115349194|emb|CAL22159.1| putative anti-sigma B factor antagonist [Yersinia pestis CO92] gi|145209338|gb|ABP38745.1| anti-sigma B factor antagonist [Yersinia pestis Pestoides F] gi|149288983|gb|EDM39063.1| putative anti-sigma B factor antagonist [Yersinia pestis CA88-4125] gi|152958660|gb|ABS46121.1| putative anti-anti-sigma factor [Yersinia pseudotuberculosis IP 31758] gi|162353254|gb|ABX87202.1| putative anti-anti-sigma factor [Yersinia pestis Angola] gi|165914649|gb|EDR33263.1| putative anti-anti-sigma factor [Yersinia pestis biovar Orientalis str. IP275] gi|165919874|gb|EDR37175.1| putative anti-anti-sigma factor [Yersinia pestis biovar Orientalis str. F1991016] gi|165989722|gb|EDR42023.1| putative anti-anti-sigma factor [Yersinia pestis biovar Antiqua str. E1979001] gi|166206906|gb|EDR51386.1| putative anti-anti-sigma factor [Yersinia pestis biovar Antiqua str. B42003004] gi|166961322|gb|EDR57343.1| putative anti-anti-sigma factor [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050070|gb|EDR61478.1| putative anti-anti-sigma factor [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054037|gb|EDR63865.1| putative anti-anti-sigma factor [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169749301|gb|ACA66819.1| putative anti-sigma B factor antagonist [Yersinia pseudotuberculosis YPIII] gi|186700025|gb|ACC90654.1| anti-sigma B factor antagonist [Yersinia pseudotuberculosis PB1/+] gi|229678225|gb|EEO74330.1| hypothetical protein YP516_3926 [Yersinia pestis Nepal516] gi|229687284|gb|EEO79359.1| hypothetical protein YPF_4291 [Yersinia pestis biovar Orientalis str. India 195] gi|229695593|gb|EEO85640.1| hypothetical protein YPH_1508 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229705816|gb|EEO91825.1| hypothetical protein YPS_0770 [Yersinia pestis Pestoides A] gi|262363370|gb|ACY60091.1| putative anti-sigma B factor antagonist [Yersinia pestis D106004] gi|262367252|gb|ACY63809.1| putative anti-sigma B factor antagonist [Yersinia pestis D182038] gi|270337046|gb|EFA47823.1| anti-anti-sigma factor [Yersinia pestis KIM D27] gi|294355766|gb|ADE66107.1| putative anti-sigma B factor antagonist [Yersinia pestis Z176003] gi|320017113|gb|ADW00685.1| hypothetical protein YPC_4285 [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 100 Score = 42.9 bits (100), Expect = 0.081, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 37/90 (41%), Gaps = 8/90 (8%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---K 64 G + + +++ +D + +D+S + +D+ G L+++F E + Sbjct: 13 TLVLQGELDRETLLPLWQQ-----RETLLADKSRIDVSQLQRVDSSGLALLVHFRELQSQ 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIK 94 +++ G+S + L L + ++ Sbjct: 68 RGHSLEIIGISNRLATLIELYNLQQIIPVE 97 >gi|183219914|ref|YP_001837910.1| putative anti-sigma-B factor antagonist [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910038|ref|YP_001961593.1| anti-sigma factor antagonist [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774714|gb|ABZ93015.1| Anti-sigma factor antagonist [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778336|gb|ABZ96634.1| Putative anti-sigma-B factor antagonist (Anti-anti-sigma-B factor) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 112 Score = 42.9 bits (100), Expect = 0.088, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 5/84 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF-- 61 NGI V + GN + + + + ++S I DL ++ ID+ G LIM Sbjct: 9 NGIVVLKLFGNLDMLNAGILKERIKESASQS--EHRFIFDLEGVSFIDSSGFGLIMSLND 66 Query: 62 -MEKYHGKIKLQGVSTHIEQLFSL 84 + + G +++ VS I Q+F + Sbjct: 67 KLTELGGGLRIVNVSKTIRQIFRI 90 >gi|315506297|ref|YP_004085184.1| sulfate transporter/antisigma-factor antagonist stas [Micromonospora sp. L5] gi|315412916|gb|ADU11033.1| Sulfate transporter/antisigma-factor antagonist STAS [Micromonospora sp. L5] Length = 123 Score = 42.9 bits (100), Expect = 0.090, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 29/93 (31%), Gaps = 2/93 (2%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G R AG E+ D V A + +D + + D+ G ++ Sbjct: 24 GSARVRLAGELDFDTAPELVDAV--AGLRRDGHQELELDFAGVDLCDSSGLSALVVIHRA 81 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97 G I+L ++ I L Q+ Sbjct: 82 GTGAIRLLNLNPQIRHLLDRTGLAELLAAPPQE 114 >gi|294498251|ref|YP_003561951.1| PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase [Bacillus megaterium QM B1551] gi|294348188|gb|ADE68517.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor [Bacillus megaterium QM B1551] Length = 922 Score = 42.9 bits (100), Expect = 0.090, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 89/268 (33%), Gaps = 47/268 (17%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSY------KFKGFLLSLIRQMYYVGVSGVPVV 171 + N+ L + + F ++ KF F L +G+ + + Sbjct: 8 LEGTYNELLVTLSFLIAITAAYASFGLANRVKISRAKFIQFWLISGACTLGIGIWSMHFI 67 Query: 172 ILISFVTGAVIAQQG-AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 +++F ++ LS GA + + + + + + A++IA GS + A Sbjct: 68 AMLAFHLPVDVSYNLWFVLLSILGA--ITGCYIGLYLIHKQKKSIKALIIA---GSFMGA 122 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 I M + M ++ + +I P + L+ A+ ++ +W Sbjct: 123 GIVFMH------YLGMMAMEPI----------MISYDPFIVFLSILIAVAASNTALWLG- 165 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-GVHSNSLGKKVTT- 348 F+S+ + +F +I + M AI + G S+ + Sbjct: 166 ------FYSKLNE--GKLTVFAKVICSTIMGIAIAGMH-YTGMQAASFSGMSMSEHSNGF 216 Query: 349 -------CVVQSISIVIIIDSLFAIFYF 369 VV IV + ++F + Sbjct: 217 ALNPIYLSVVIVFFIVCLFTAVFLTIFM 244 >gi|326318249|ref|YP_004235921.1| sulfate transporter/antisigma-factor antagonist STAS [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375085|gb|ADX47354.1| Sulfate transporter/antisigma-factor antagonist STAS [Acidovorax avenae subsp. avenae ATCC 19860] Length = 105 Score = 42.5 bits (99), Expect = 0.095, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 38/86 (44%), Gaps = 5/86 (5%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 IT G +E ++ A++ S + +DL+ +TEID+ G +L+M Sbjct: 4 ITTLALDGELTIYRAAETRTGLLAALSDSPEG--LEIDLAGVTEIDSAGVQLLMAARRDA 61 Query: 66 HGK---IKLQGVSTHIEQLFSLISFT 88 + ++ G + + ++ +L + Sbjct: 62 QARGQWLRFTGCNAPVSEVLALFDLS 87 >gi|84385523|ref|ZP_00988554.1| Anti-anti-sigma regulatory factor [Vibrio splendidus 12B01] gi|86146028|ref|ZP_01064355.1| Anti-anti-sigma regulatory factor [Vibrio sp. MED222] gi|218709510|ref|YP_002417131.1| putative anti-sigma regulatory factor [Vibrio splendidus LGP32] gi|84379503|gb|EAP96355.1| Anti-anti-sigma regulatory factor [Vibrio splendidus 12B01] gi|85836233|gb|EAQ54364.1| Anti-anti-sigma regulatory factor [Vibrio sp. MED222] gi|218322529|emb|CAV18688.1| putative anti-sigma regulatory factor [Vibrio splendidus LGP32] Length = 109 Score = 42.5 bits (99), Expect = 0.095, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 40/101 (39%), Gaps = 6/101 (5%) Query: 6 ITVFRFA--GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 T + G+ + S A + + + VD S + +D+ G I+Y + Sbjct: 10 TTTLTLSIFGDLDAAG-SRDAQTDIDDVISNDGHPEIEVDFSQVEFLDSSGVGAIVYMFK 68 Query: 64 KY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 + ++L+ V+ ++ +L+ H + ++ P S Sbjct: 69 RLTERERNMRLENVTGQPLEIMNLLRIGHAIPVNSKNPTNS 109 >gi|303246824|ref|ZP_07333101.1| anti-sigma-factor antagonist [Desulfovibrio fructosovorans JJ] gi|302491841|gb|EFL51721.1| anti-sigma-factor antagonist [Desulfovibrio fructosovorans JJ] Length = 110 Score = 42.5 bits (99), Expect = 0.098, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 37/85 (43%), Gaps = 5/85 (5%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66 V F+G + + + + K+ +DL+ +T ID+ G L++ ++ Sbjct: 22 VIAFSGEIDFSVTPAVRERLWELVGKA--GKHIELDLADLTYIDSSGLALLLELRKQLAE 79 Query: 67 --GKIKLQGVSTHIEQLFSLISFTH 89 + ++ +S + +LF+L + Sbjct: 80 ADRTVAIRSISPQVRKLFNLTQLSD 104 >gi|283788170|ref|YP_003368035.1| putative anti-sigma factor antagonist [Citrobacter rodentium ICC168] gi|282951624|emb|CBG91324.1| putative anti-sigma factor antagonist [Citrobacter rodentium ICC168] Length = 98 Score = 42.5 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 11/91 (12%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---K 64 AG ++ + D V A+ + +DLS I+ +DT G L+++ +E K Sbjct: 13 TLMLAGELDQDVLNPLWDARVEAMKE-----VTCIDLSQISRVDTGGLALLVHLIELAKK 67 Query: 65 YHGKIKLQGVSTHI---EQLFSLISFTHRKK 92 + LQGV+ + QL++L + + Sbjct: 68 QGNSVSLQGVNDKVYTLAQLYNLPADVLPRP 98 >gi|239931434|ref|ZP_04688387.1| hypothetical protein SghaA1_24659 [Streptomyces ghanaensis ATCC 14672] Length = 210 Score = 42.5 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 12/114 (10%), Positives = 33/114 (28%), Gaps = 6/114 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E + G +A+ + + + D +D+S + +DT G E + Sbjct: 8 EADRALLVPRGELVRGCAHALAEKLARLPADTARVD---LDMSGVHFMDTAGLEFLDVLR 64 Query: 63 ---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYH 113 + + + ++ L ++ P+ + + Sbjct: 65 DHGRRRSVPVTATRWNGQPRRILELAGLDTADPLRRPAPEGASARAASAVSLER 118 >gi|238896698|ref|YP_002921443.1| hypothetical protein KP1_4913 [Klebsiella pneumoniae NTUH-K2044] gi|238549025|dbj|BAH65376.1| hypothetical protein KP1_4913 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 96 Score = 42.5 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 8/80 (10%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEK 64 G + + + A + +AI+DLS T +DT G L+++ + + Sbjct: 13 TLALHGELDQDLLVPLWEARAQA-----TAGTAIIDLSQTTRVDTAGLALLVHFVALIRR 67 Query: 65 YHGKIKLQGVSTHIEQLFSL 84 + +L G S +++ L L Sbjct: 68 QGREAQLVGKSENLQTLIGL 87 >gi|239978136|ref|ZP_04700660.1| putative anti-sigma factor antagonist [Streptomyces albus J1074] Length = 129 Score = 42.5 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 2/94 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 SE G V + G+ I+ + + A + S +VDLS + D+ + + Sbjct: 21 SEGGGIVVQLGGDLDLENITPLGPALSDA--AATVSGPVVVDLSGVGFADSSTVNVFLQA 78 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKN 95 +++ +S +E+LF LI + Sbjct: 79 YGAIGPRLRFAALSPFVERLFGLIGLQSALPVHE 112 >gi|329997633|ref|ZP_08302890.1| hypothetical protein HMPREF9538_00528 [Klebsiella sp. MS 92-3] gi|328538943|gb|EGF64997.1| hypothetical protein HMPREF9538_00528 [Klebsiella sp. MS 92-3] Length = 95 Score = 42.5 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 8/80 (10%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEK 64 G + + + A + +AI+DLS T +DT G L+++ + + Sbjct: 13 TLALHGELDQDLLVPLWEARAQA-----TAGTAIIDLSQTTRVDTAGLALLVHFVALIRR 67 Query: 65 YHGKIKLQGVSTHIEQLFSL 84 + +L G S +++ L L Sbjct: 68 QGREAQLVGKSENLQTLIGL 87 >gi|217969737|ref|YP_002354971.1| anti-sigma-factor antagonist [Thauera sp. MZ1T] gi|217507064|gb|ACK54075.1| anti-sigma-factor antagonist [Thauera sp. MZ1T] Length = 111 Score = 42.5 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 32/83 (38%), Gaps = 3/83 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G+ G ++ + + + A+ ++ +DL I EIDT G +L++ Sbjct: 12 GVARLAPEGELGIYTVAALREAWLQALA---THEALEIDLGRIDEIDTAGLQLMLMAKRS 68 Query: 65 YHGKIKLQGVSTHIEQLFSLISF 87 ++ S + +L L Sbjct: 69 VGRSVRFVNHSAAVLRLLDLARL 91 >gi|330468644|ref|YP_004406387.1| sulfate transporter/antisigma-factor antagonist stas [Verrucosispora maris AB-18-032] gi|328811615|gb|AEB45787.1| sulfate transporter/antisigma-factor antagonist stas [Verrucosispora maris AB-18-032] Length = 114 Score = 42.5 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 31/92 (33%), Gaps = 2/92 (2%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G R G+ E+ V + ++DL+ + D+ G ++ Sbjct: 16 GRAELRLTGDLDFDSAPELISAVEKLRRDGYRH--LLIDLAGVAICDSSGLSALVVAHRG 73 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96 I+L G++ ++ QL ++ Sbjct: 74 SPVPIRLVGINPNLRQLLDRTGLAELLQVSPA 105 >gi|295703601|ref|YP_003596676.1| diguanylate cyclase/phosphodiesterase [Bacillus megaterium DSM 319] gi|294801260|gb|ADF38326.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor [Bacillus megaterium DSM 319] Length = 922 Score = 42.5 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 40/268 (14%), Positives = 87/268 (32%), Gaps = 47/268 (17%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSY------KFKGFLLSLIRQMYYVGVSGVPVV 171 + N+ + + F ++ KF F L +G+ + + Sbjct: 8 LEGTYNELLVTLSFFIAITAAYASFGLANRVKISRAKFIQFWLISGAFTLGIGIWSMHFI 67 Query: 172 ILISFVTGAVIAQQG-AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 +++F ++ LS GA + + + + + + A++IA GS + A Sbjct: 68 AMLAFHLPVDVSYNLWFVLLSVLGA--ITGCYIGLYLIHKQKKSIKALIIA---GSFMGA 122 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 I M + M ++ + +I P + L+ A+ ++ +W Sbjct: 123 GIVFMH------YLGMMAMEPI----------MISYDPFIVFLSILIAVAASNTALWLG- 165 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-GVHSNSLGKKVTT- 348 F+S+ + +F I + M AI + G S+ + Sbjct: 166 ------FYSKLNE--GKLTVFAKFICSTIMGIAIAGMH-YTGMQAASFSGMSMSEHSNGF 216 Query: 349 -------CVVQSISIVIIIDSLFAIFYF 369 VV IV + ++F + Sbjct: 217 ALNPIYLSVVIVFFIVCLFTAVFLTIFM 244 >gi|219870958|ref|YP_002475333.1| putative anti-sigma factor B antagonist [Haemophilus parasuis SH0165] gi|219691162|gb|ACL32385.1| putative anti-sigma factor B antagonist [Haemophilus parasuis SH0165] Length = 112 Score = 42.5 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 3/90 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 N + + +G + + ++ S DL +T ID+ G L+ Sbjct: 13 QNNESLMVQLSGELTRDTLLPLWKQRASFLSPK-SSQHIYWDLKGLTSIDSSGFTLLAEL 71 Query: 62 MEKYHGKIK--LQGVSTHIEQLFSLISFTH 89 + Y K K L V + L L Sbjct: 72 LHLYQQKNKNCLFNVPQAVHSLAELFDLAD 101 >gi|255592342|ref|XP_002535675.1| conserved hypothetical protein [Ricinus communis] gi|223522326|gb|EEF26708.1| conserved hypothetical protein [Ricinus communis] Length = 113 Score = 42.2 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 27/69 (39%) Query: 19 EISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHI 78 I + + D +DLS I+++DT G +L++ + K V H Sbjct: 18 TIYNAPEQKTRLLTALSGCDELELDLSQISDMDTAGFQLLVLAKREAIRAGKALNVVEHS 77 Query: 79 EQLFSLISF 87 + + L+ Sbjct: 78 KAVTDLLDL 86 >gi|145300161|ref|YP_001143002.1| sulfate transporter/antisigma-factor antagonist STAS [Aeromonas salmonicida subsp. salmonicida A449] gi|142852933|gb|ABO91254.1| sulfate transporter/antisigma-factor antagonist STAS [Aeromonas salmonicida subsp. salmonicida A449] Length = 108 Score = 42.2 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 11/81 (13%), Positives = 32/81 (39%), Gaps = 3/81 (3%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 T+ + +G +E+ + + + + +DLS ++E+D+ G +L++ + Sbjct: 12 TLVKISGEMTIYTAAELKQALTPLLYRQ---QALELDLSGVSEMDSAGLQLLLAAKKTMQ 68 Query: 67 GKIKLQGVSTHIEQLFSLISF 87 + H + + Sbjct: 69 QGDSPLHLVMHSHAVLDALEL 89 >gi|322515304|ref|ZP_08068301.1| NTP binding protein (contains STAS domain) [Actinobacillus ureae ATCC 25976] gi|322118680|gb|EFX90892.1| NTP binding protein (contains STAS domain) [Actinobacillus ureae ATCC 25976] Length = 119 Score = 42.2 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 10/90 (11%), Positives = 26/90 (28%), Gaps = 3/90 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 N + +G + + ++ + DL + +D+ G L+ Sbjct: 13 QNNESLFVKLSGELTRDTLLPLWKQRASFLSPK-GNQHIYWDLKDLERVDSAGFTLLAEL 71 Query: 62 ME--KYHGKIKLQGVSTHIEQLFSLISFTH 89 + + L ++ L L + Sbjct: 72 LNHYQKQTPNWLINSPETVKTLAELFDLSE 101 >gi|254507964|ref|ZP_05120092.1| anti-anti-sigma regulatory factor [Vibrio parahaemolyticus 16] gi|219549072|gb|EED26069.1| anti-anti-sigma regulatory factor [Vibrio parahaemolyticus 16] Length = 106 Score = 42.2 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 37/99 (37%), Gaps = 4/99 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + + + GN + S A + I +D S + +D+ G I+Y Sbjct: 8 ASDTVLTLVINGNLDAAG-SRSAQPHIDEIIADKSDREIEIDFSQVQFLDSSGVGAIVYL 66 Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97 ++ ++L+ VS ++ +L+ + + K Sbjct: 67 YKRLIERQRGMRLENVSGQPLEIMNLLRIDQAIPVNSSK 105 >gi|15602043|ref|NP_245115.1| hypothetical protein PM0178 [Pasteurella multocida subsp. multocida str. Pm70] gi|12720398|gb|AAK02262.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 125 Score = 42.2 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 22/63 (34%), Gaps = 1/63 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINK-SIQSDSAIVDLSAITEIDTIGAELIMY 60 N R AG + + + + Q + DL+ + +D+ G L+ Sbjct: 13 QNNDKITLRLAGELSRDTLLPLWSQRASFLPEEKSQVQTLYWDLTDVARVDSAGFALLCD 72 Query: 61 FME 63 F+ Sbjct: 73 FIR 75 >gi|163749279|ref|ZP_02156528.1| SpoIIAA family protein [Shewanella benthica KT99] gi|161330998|gb|EDQ01924.1| SpoIIAA family protein [Shewanella benthica KT99] Length = 100 Score = 42.2 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 36/82 (43%), Gaps = 4/82 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 +V +G ++ ++ ++ I+ ++DLSA++ D+ G I+ + Sbjct: 8 GSVCCISGRLSQGDVVKLWGKRKRLLSAKIK----VIDLSALSYSDSAGIAFILELIALA 63 Query: 66 HGKIKLQGVSTHIEQLFSLISF 87 + ++ +S QL LI+ Sbjct: 64 KREGRVVTLSAASSQLAKLIAL 85 >gi|294139197|ref|YP_003555175.1| SpoIIAA family protein [Shewanella violacea DSS12] gi|293325666|dbj|BAJ00397.1| SpoIIAA family protein [Shewanella violacea DSS12] Length = 100 Score = 42.2 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 42/94 (44%), Gaps = 7/94 (7%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---E 63 +V +G ++ ++ ++ +I+ ++DLSA+T D+ G I+ + + Sbjct: 9 SVCCISGRLSQGDVVKLWGKRKRLLSDNIK----VIDLSALTYSDSAGIAFILELIALSK 64 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97 + +I L S+ + +L L H + +K Sbjct: 65 QQGREITLSSASSQLSKLIGLYDLEHFFDEEVKK 98 >gi|117164995|emb|CAJ88547.1| putative anti sigma factor antagonist [Streptomyces ambofaciens ATCC 23877] Length = 128 Score = 42.2 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 18/120 (15%), Positives = 36/120 (30%), Gaps = 12/120 (10%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 E+G TV G +EIA + + ++DLS + D G L+ Sbjct: 16 QEHGHTVLELRGEIDIASAAEIAPRLEREAGR--PGARVVLDLSGVEFFDCSGLRLLYRA 73 Query: 62 MEK---YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + + G++ L ++ + + L G++ Sbjct: 74 RRQVLDHGGQVHLVCTHPLTLRMLRITGLARLL-------PPRATLDEVLGLTRPAGRRT 126 >gi|293394227|ref|ZP_06638527.1| anti-sigma-factor antagonist [Serratia odorifera DSM 4582] gi|291423205|gb|EFE96434.1| anti-sigma-factor antagonist [Serratia odorifera DSM 4582] Length = 100 Score = 42.2 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 9/90 (10%), Positives = 37/90 (41%), Gaps = 8/90 (8%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EK 64 +G+ + + +++ + VD++ + +D+ G L+++ ++ Sbjct: 13 TLVLSGDLDRETLLPLWQQ-----RETLLAGKTAVDVAQLQRVDSSGLALLVHLRAQQQR 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIK 94 ++++ G + ++ L +L + + Sbjct: 68 QGVELQIIGATDRLKTLITLYNLQEIMPVD 97 >gi|271968052|ref|YP_003342248.1| anti-anti-sigma regulatory factor-like protein [Streptosporangium roseum DSM 43021] gi|270511227|gb|ACZ89505.1| Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)-like protein [Streptosporangium roseum DSM 43021] Length = 118 Score = 42.2 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 36/87 (41%), Gaps = 1/87 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 SEN V R G +++ + + + + + +VDLS +T +D+ G ++ Sbjct: 11 SENATLVLRPEGELDVNTAAQLQAWLDDYLARGPR-PATLVDLSGLTFVDSPGLAALLAM 69 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFT 88 + G+ + + Q L+ T Sbjct: 70 RRRLTGEGRAVAYADPTPQPARLLRIT 96 >gi|117923942|ref|YP_864559.1| anti-sigma-factor antagonist [Magnetococcus sp. MC-1] gi|117607698|gb|ABK43153.1| anti-sigma-factor antagonist [Magnetococcus sp. MC-1] Length = 105 Score = 42.2 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 27/63 (42%), Gaps = 3/63 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E + G+ + +E+ + V A+ DS +++LS +T ID G +++ Sbjct: 7 EGSSARLQLTGDLTIQQAAELKESCVQAVQS---GDSLVLNLSGVTRIDLAGLQILCAMH 63 Query: 63 EKY 65 Sbjct: 64 RAL 66 >gi|325131368|gb|EGC54077.1| hypothetical protein NMBM6190_1870 [Neisseria meningitidis M6190] gi|325133420|gb|EGC56084.1| hypothetical protein NMBM13399_1939 [Neisseria meningitidis M13399] gi|325137486|gb|EGC60071.1| hypothetical protein NMBES14902_1850 [Neisseria meningitidis ES14902] gi|325141488|gb|EGC63961.1| hypothetical protein NMB9615945_1901 [Neisseria meningitidis 961-5945] gi|325199051|gb|ADY94507.1| conserved hypothetical protein [Neisseria meningitidis G2136] gi|325206867|gb|ADZ02320.1| conserved hypothetical protein [Neisseria meningitidis M04-240196] Length = 92 Score = 42.2 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 11/80 (13%), Positives = 27/80 (33%), Gaps = 4/80 (5%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFMEKYH 66 +G+ ++ + + + I VD + D+ L++ + Sbjct: 9 TLHISGDITVKTLT---GEAFERFQQQCRLKETIAVDFGGVKRADSACVSLLLEVLRGCK 65 Query: 67 GKIKLQGVSTHIEQLFSLIS 86 G ++L G+ + L L Sbjct: 66 GSVRLTGIPESVRALSELYE 85 >gi|145297396|ref|YP_001140237.1| hypothetical protein ASA_0305 [Aeromonas salmonicida subsp. salmonicida A449] gi|142850168|gb|ABO88489.1| conserved hypothetical protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 139 Score = 42.2 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 39/83 (46%), Gaps = 9/83 (10%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G V +F+G+ ++P+++ + ++ ++LS +T +D+ G L++ + + Sbjct: 46 GHQVMKFSGDLQAPQVNALWQR------RADWWQEDQLELSGVTTLDSAGLALLVKWAKA 99 Query: 65 ---YHGKIKLQGVSTHIEQLFSL 84 +L G ST L +L Sbjct: 100 VLVRGATPQLVGASTDFYTLANL 122 >gi|168463465|ref|ZP_02697382.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195633593|gb|EDX52007.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 98 Score = 42.2 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 8/80 (10%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 AG ++ + D V A + +DLS I+ +DT G L+ + +K Sbjct: 13 TLVLAGELDQDVLAPLWDARVEA-----TTGVTRIDLSQISRVDTGGLALLAHLVNQAKK 67 Query: 65 YHGKIKLQGVSTHIEQLFSL 84 + L GV+ + L L Sbjct: 68 QGNAVSLSGVNDKVYALAQL 87 >gi|121635617|ref|YP_975862.1| hypothetical protein NMC1934 [Neisseria meningitidis FAM18] gi|120867323|emb|CAM11094.1| hypothetical protein NMC1934 [Neisseria meningitidis FAM18] gi|325143671|gb|EGC65990.1| hypothetical protein NMBM01240013_1912 [Neisseria meningitidis M01-240013] Length = 100 Score = 42.2 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 11/80 (13%), Positives = 27/80 (33%), Gaps = 4/80 (5%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFMEKYH 66 +G+ ++ + + + I VD + D+ L++ + Sbjct: 17 TLHISGDITVKTLT---GEAFERFQQQCRLKETIAVDFGGVKRADSACVSLLLEVLRGCK 73 Query: 67 GKIKLQGVSTHIEQLFSLIS 86 G ++L G+ + L L Sbjct: 74 GSVRLTGIPESVRALSELYE 93 >gi|303249034|ref|ZP_07335278.1| anti-sigma-factor antagonist [Desulfovibrio fructosovorans JJ] gi|302489557|gb|EFL49498.1| anti-sigma-factor antagonist [Desulfovibrio fructosovorans JJ] Length = 259 Score = 42.2 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 42/90 (46%), Gaps = 9/90 (10%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQ--SDSAIVDLSAITEIDTIGAELIMY 60 E+G V AG+ ++ +AD + + +Q ++DL+ + ID++G L++ Sbjct: 164 EDGTAVVSPAGD----IVASVADALRARFKELLQEHPGGLVIDLARVELIDSVGIGLLIA 219 Query: 61 F---MEKYHGKIKLQGVSTHIEQLFSLISF 87 + K G++ L+ V+ + L + Sbjct: 220 VHNTLGKKGGRLVLRNVNPDLAALLRTMRL 249 >gi|326794030|ref|YP_004311850.1| sulfate transporter/antisigma-factor antagonist STAS [Marinomonas mediterranea MMB-1] gi|326544794|gb|ADZ90014.1| Sulfate transporter/antisigma-factor antagonist STAS [Marinomonas mediterranea MMB-1] Length = 109 Score = 41.8 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 40/92 (43%), Gaps = 5/92 (5%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 V AG I+E D + + + + DLS +T ID+ G I++ ++ Sbjct: 13 VLELAGEMDCVAIAENKDAIE--LIPTTFDGDIVFDLSKVTFIDSSGIGAIVFLFKRLRE 70 Query: 68 KIK---LQGVSTHIEQLFSLISFTHRKKIKNQ 96 + + L G++ ++L +L+ IK+ Sbjct: 71 EERSLVLSGLNGQPKELMTLLRIDRAITIKDD 102 >gi|67921461|ref|ZP_00514979.1| Anti-sigma factor antagonist [Crocosphaera watsonii WH 8501] gi|67856573|gb|EAM51814.1| Anti-sigma factor antagonist [Crocosphaera watsonii WH 8501] Length = 116 Score = 41.8 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 40/96 (41%), Gaps = 4/96 (4%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM- 59 +++ G+ VF +G + + +++ + +VD+ + ID+ G I+ Sbjct: 5 LTDIGVAVFEPSGYLTAANVDSFQEELTNFVT-HNPCRDFLVDMHQVEFIDSAGLMAIVS 63 Query: 60 --YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 ++ + K+ + +S + +F L +I Sbjct: 64 AFRLAQRLNKKLSVCCLSPSVRIIFELSQLDQALEI 99 >gi|261366788|ref|ZP_05979671.1| anti-sigma F factor antagonist [Subdoligranulum variabile DSM 15176] gi|282571619|gb|EFB77154.1| anti-sigma F factor antagonist [Subdoligranulum variabile DSM 15176] Length = 98 Score = 41.8 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 35/90 (38%), Gaps = 4/90 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60 +G +G + ++ ++ + + +D S +T +D+ G LI+ Sbjct: 10 SGTLAAYLSGEIDHHAAQSLRREIDAQVDDRL-PELLTLDFSGVTFMDSSGVGLILGRDR 68 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHR 90 + G++ +Q + ++ L T+ Sbjct: 69 HIASLGGRLTVQNPPPAVRRMLDLARITYA 98 >gi|325204912|gb|ADZ00366.1| conserved hypothetical protein [Neisseria meningitidis M01-240355] Length = 83 Score = 41.8 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 2/77 (2%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 G+ ++ A + D+ VDLS + D+ L++ + G + Sbjct: 2 HIGGDITVKTLTAAAFTRFRQQCRL--KDTCAVDLSGVGRADSACVSLLLEVLRGCKGSV 59 Query: 70 KLQGVSTHIEQLFSLIS 86 +L G+ + L L Sbjct: 60 RLTGIPESVRALSELYE 76 >gi|319788305|ref|YP_004147780.1| anti-anti-sigma factor [Pseudoxanthomonas suwonensis 11-1] gi|317466817|gb|ADV28549.1| anti-anti-sigma factor [Pseudoxanthomonas suwonensis 11-1] Length = 133 Score = 41.8 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 16/112 (14%), Positives = 43/112 (38%), Gaps = 4/112 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG---AELIM 59 +NG+ +G + SE+ D + + + S ++DL + I + G + Sbjct: 12 QNGVQRIAVSGRLDTGSHSEL-DHAIDPLLADERVSSVVLDLEGLNYISSAGLRSLSRVR 70 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLH 111 + + H + L I+++F ++ K + + + ++ + Sbjct: 71 RALARRHRSVLLINPQPQIQKVFDVVDAVPLKDVFASVEEADQYLDAMQRKL 122 >gi|16762071|ref|NP_457688.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16766604|ref|NP_462219.1| hypothetical protein STM3309 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29143560|ref|NP_806902.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|161616319|ref|YP_001590284.1| hypothetical protein SPAB_04127 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167552041|ref|ZP_02345794.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167994502|ref|ZP_02575593.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168238011|ref|ZP_02663069.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168243145|ref|ZP_02668077.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168262678|ref|ZP_02684651.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|194445872|ref|YP_002042567.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450078|ref|YP_002047338.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194738002|ref|YP_002116259.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197249208|ref|YP_002148234.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197262522|ref|ZP_03162596.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|200386608|ref|ZP_03213220.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|213024118|ref|ZP_03338565.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213053029|ref|ZP_03345907.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213419092|ref|ZP_03352158.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213426648|ref|ZP_03359398.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213584874|ref|ZP_03366700.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213646984|ref|ZP_03377037.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|289825819|ref|ZP_06544987.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25512337|pir||AD0904 probable anti-sigma factor antagonist [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16421866|gb|AAL22178.1| putative STAS domain protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16504374|emb|CAD07826.1| possible anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Typhi] gi|29139195|gb|AAO70762.1| possible anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|161365683|gb|ABX69451.1| hypothetical protein SPAB_04127 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194404535|gb|ACF64757.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408382|gb|ACF68601.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194713504|gb|ACF92725.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197212911|gb|ACH50308.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197240777|gb|EDY23397.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289068|gb|EDY28437.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|199603706|gb|EDZ02251.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205323215|gb|EDZ11054.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205327642|gb|EDZ14406.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205337858|gb|EDZ24622.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205348546|gb|EDZ35177.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261248474|emb|CBG26311.1| possible anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995508|gb|ACY90393.1| hypothetical protein STM14_3997 [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159858|emb|CBW19377.1| possible anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914336|dbj|BAJ38310.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321225267|gb|EFX50326.1| hypothetical protein YrbB [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323131669|gb|ADX19099.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 98 Score = 41.8 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 8/80 (10%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 AG ++ + D V A+N +DLS I+ +DT G L+ + +K Sbjct: 13 TLVLAGELDQDVLAPLWDARVEAMN-----GVTRIDLSQISRVDTGGLALLAHLVNQAKK 67 Query: 65 YHGKIKLQGVSTHIEQLFSL 84 + L GV+ + L L Sbjct: 68 QGNAVSLSGVNDKVYALAQL 87 >gi|125972642|ref|YP_001036552.1| anti-sigma-factor antagonist [Clostridium thermocellum ATCC 27405] gi|256004729|ref|ZP_05429705.1| anti-sigma-factor antagonist [Clostridium thermocellum DSM 2360] gi|281416834|ref|ZP_06247854.1| anti-sigma-factor antagonist [Clostridium thermocellum JW20] gi|125712867|gb|ABN51359.1| anti-sigma-factor antagonist [Clostridium thermocellum ATCC 27405] gi|255991322|gb|EEU01428.1| anti-sigma-factor antagonist [Clostridium thermocellum DSM 2360] gi|281408236|gb|EFB38494.1| anti-sigma-factor antagonist [Clostridium thermocellum JW20] gi|316941120|gb|ADU75154.1| anti-sigma-factor antagonist [Clostridium thermocellum DSM 1313] Length = 111 Score = 41.8 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 38/86 (44%), Gaps = 4/86 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59 + V G +E + A + + ++D S +T +D+ G +IM Sbjct: 7 NRGNTLVAVLNGELD-HHTAEYIRQKLDAEMMKSTTKNMVLDFSKVTFMDSSGIGVIMGR 65 Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSL 84 + K +GK+ L G++ I+++F + Sbjct: 66 YKNIRKLNGKMSLAGINDKIKRIFEM 91 >gi|160933633|ref|ZP_02081021.1| hypothetical protein CLOLEP_02487 [Clostridium leptum DSM 753] gi|156867510|gb|EDO60882.1| hypothetical protein CLOLEP_02487 [Clostridium leptum DSM 753] Length = 130 Score = 41.8 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 15/104 (14%), Positives = 43/104 (41%), Gaps = 4/104 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59 +++G+ G+ E+ + I + + ++D + +D+ G L+M Sbjct: 17 NQDGVLTAALTGDIDHHTARELRLAIDEVIERD-KPGLLLLDFQGVDFMDSSGIGLVMGR 75 Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF 102 M++ G++++ V +I ++F L ++ + + Sbjct: 76 YKVMQQNGGEVEVTHVPKYISRVFKLSGLEQLGVMEKKARPQKR 119 >gi|296313908|ref|ZP_06863849.1| hypothetical protein NEIPOLOT_00771 [Neisseria polysaccharea ATCC 43768] gi|296839442|gb|EFH23380.1| hypothetical protein NEIPOLOT_00771 [Neisseria polysaccharea ATCC 43768] Length = 100 Score = 41.8 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 27/79 (34%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 G+ ++ A + + ++ VD + D+ L++ + G Sbjct: 17 TLHIGGDITVKTLTRDAFERFRQQCRL--KETIAVDFGGVKRADSACVSLLLEVLRGCKG 74 Query: 68 KIKLQGVSTHIEQLFSLIS 86 ++L G+ + L L Sbjct: 75 SVRLTGIPESVRALSELYE 93 >gi|302519937|ref|ZP_07272279.1| anti-sigma F factor antagonist [Streptomyces sp. SPB78] gi|318056975|ref|ZP_07975698.1| putative anti-sigma factor antagonist [Streptomyces sp. SA3_actG] gi|318081223|ref|ZP_07988555.1| putative anti-sigma factor antagonist [Streptomyces sp. SA3_actF] gi|302428832|gb|EFL00648.1| anti-sigma F factor antagonist [Streptomyces sp. SPB78] Length = 124 Score = 41.8 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 34/82 (41%), Gaps = 5/82 (6%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59 +G V R AG + V A+ + S ++DLS + D+ G +++ Sbjct: 9 ERDGWAVLRVAGEMDLVSSPSVRQRVHEAVAR--GRHSVVLDLSEVHFCDSSGVGVLIAA 66 Query: 60 -YFMEKYHGKIKLQGVSTHIEQ 80 M HG++++ + E+ Sbjct: 67 RRLMRSCHGRLRIVLPARGAEE 88 >gi|154499844|ref|ZP_02037882.1| hypothetical protein BACCAP_03501 [Bacteroides capillosus ATCC 29799] gi|150271442|gb|EDM98699.1| hypothetical protein BACCAP_03501 [Bacteroides capillosus ATCC 29799] Length = 135 Score = 41.8 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 10/91 (10%), Positives = 30/91 (32%), Gaps = 4/91 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 E+ +G + ++ ++ + +DLS +T +D+ G +++ Sbjct: 41 GEDRNLRLTVSGEVDHHGARAVMQELDRQVDAGL-PKRLTLDLSGVTFMDSSGIAVLLRA 99 Query: 62 MEK---YHGKIKLQGVSTHIEQLFSLISFTH 89 + G + + V ++ Sbjct: 100 YRRMAELGGALTVANVPPQALKVLRAAGLER 130 >gi|295838221|ref|ZP_06825154.1| conserved hypothetical protein [Streptomyces sp. SPB74] gi|197696633|gb|EDY43566.1| conserved hypothetical protein [Streptomyces sp. SPB74] Length = 124 Score = 41.8 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 34/82 (41%), Gaps = 5/82 (6%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59 +G V R AG + V A+ + S ++DLS + D+ G +++ Sbjct: 9 ERDGWAVLRVAGEMDLVSSPSVRQRVHEAVAR--GRHSVVLDLSQVHFCDSSGVGVLIAA 66 Query: 60 -YFMEKYHGKIKLQGVSTHIEQ 80 M HG++++ + E+ Sbjct: 67 RRLMRSCHGRLRIVLPARGAEE 88 >gi|157148762|ref|YP_001456081.1| hypothetical protein CKO_04594 [Citrobacter koseri ATCC BAA-895] gi|157085967|gb|ABV15645.1| hypothetical protein CKO_04594 [Citrobacter koseri ATCC BAA-895] Length = 97 Score = 41.8 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 8/80 (10%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 AG ++ + D V A+ D +DLS ++ +D+ G L+++ ++ Sbjct: 13 TLALAGELDQDVLNPLWDARVDAMK-----DVTCIDLSQVSRVDSGGLALLVHLVDQAKR 67 Query: 65 YHGKIKLQGVSTHIEQLFSL 84 + LQGV+ + L L Sbjct: 68 QGNSVSLQGVNEKVYTLAKL 87 >gi|270263236|ref|ZP_06191506.1| anti-sigma-factor antagonist [Serratia odorifera 4Rx13] gi|270042924|gb|EFA16018.1| anti-sigma-factor antagonist [Serratia odorifera 4Rx13] Length = 100 Score = 41.8 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 39/86 (45%), Gaps = 10/86 (11%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S+ + R G + + + +++ +D +D+S + +D+ G L+++ Sbjct: 9 SQQQTLILR--GELDRETLLPLWEQ-----RETLLADKTALDVSQLQRVDSSGLALLVHL 61 Query: 62 MEKYHGK---IKLQGVSTHIEQLFSL 84 E+ + +K+ G + ++ L +L Sbjct: 62 REQQRQRGVELKISGATDRLKTLIAL 87 >gi|196232813|ref|ZP_03131663.1| anti-sigma-factor antagonist [Chthoniobacter flavus Ellin428] gi|196223012|gb|EDY17532.1| anti-sigma-factor antagonist [Chthoniobacter flavus Ellin428] Length = 116 Score = 41.8 bits (97), Expect = 0.20, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 39/91 (42%), Gaps = 5/91 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG-AELI-- 58 S+ G+ V G ++ ++ +S + ++D +T +D+ G A LI Sbjct: 7 SDQGVQVLAIDGEIDLACSPDL--RTLLHAYAKKKSPALLLDFQGVTYVDSSGLATLIEY 64 Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 + + + GK L VS + +F L+ + Sbjct: 65 VRLAQPFGGKFGLAHVSERVRTIFDLVRLSE 95 >gi|148657866|ref|YP_001278071.1| anti-sigma-factor antagonist [Roseiflexus sp. RS-1] gi|148569976|gb|ABQ92121.1| anti-sigma-factor antagonist [Roseiflexus sp. RS-1] Length = 117 Score = 41.8 bits (97), Expect = 0.20, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 39/110 (35%), Gaps = 5/110 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--- 58 ++G+T+ R G +++ D+ + I DL ++ +D+ G + Sbjct: 8 GDDGVTIVRMEGRLDLLTAADVKRDLADLVAD--GRRRLIFDLERVSFVDSSGLGALISG 65 Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFK 108 + + G +++ + I L L + + + Y S Sbjct: 66 LKAARQVGGDLRIARANEQIRTLLKLTTLERVLRPYETIEEARAGYTSIA 115 >gi|269137866|ref|YP_003294566.1| putative anti-sigma B factor antagonist [Edwardsiella tarda EIB202] gi|267983526|gb|ACY83355.1| putative anti-sigma B factor antagonist [Edwardsiella tarda EIB202] gi|304557919|gb|ADM40583.1| anti-sigma-factor antagonist [Edwardsiella tarda FL6-60] Length = 104 Score = 41.4 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 35/90 (38%), Gaps = 6/90 (6%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME-KYH 66 G + + + +++ +D VD+S ++ +D+ G L+++ + Sbjct: 15 TLYLQGALECDSLDALWQQ-----RQTLLTDITCVDISELSRVDSAGLALLLHVQNLRPE 69 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96 I L+GVS + L +L + Sbjct: 70 TPIPLRGVSERLRTLITLYNLQDIVVCAAP 99 >gi|150389980|ref|YP_001320029.1| anti-sigma-factor antagonist [Alkaliphilus metalliredigens QYMF] gi|149949842|gb|ABR48370.1| anti-sigma-factor antagonist [Alkaliphilus metalliredigens QYMF] Length = 111 Score = 41.4 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 4/89 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60 + + + +F G EI ++ I + + I+DLS +T +D+ G +I+ Sbjct: 9 DHVLIVKFTGELDHHVAEEIRGELDETIAQK-RMKHLILDLSEMTFMDSSGIGVIIGRYK 67 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 + K GK+ + V I ++F L H Sbjct: 68 NITKLGGKVAVINVPEKINKIFKLAGLYH 96 >gi|167628450|ref|YP_001678949.1| anti-sigma f factor antagonist [Heliobacterium modesticaldum Ice1] gi|167591190|gb|ABZ82938.1| anti-sigma f factor antagonist [Heliobacterium modesticaldum Ice1] Length = 115 Score = 41.4 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 34/88 (38%), Gaps = 5/88 (5%) Query: 1 MSENG-ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 + NG V R G + + I + ++ + +L + ID+ G I+ Sbjct: 3 IDRNGNALVVRLQGEIDLCAAEALRPRLDKEIERQ-KAKHLVFNLRGVDFIDSSGIGFIL 61 Query: 60 ---YFMEKYHGKIKLQGVSTHIEQLFSL 84 ++ GK+ L G + + ++ L Sbjct: 62 GRYKRVKALGGKVALAGPTRSVHRIIEL 89 >gi|53804224|ref|YP_113888.1| anti-anti-sigma factor family protein [Methylococcus capsulatus str. Bath] gi|53757985|gb|AAU92276.1| anti-anti-sigma factor family protein [Methylococcus capsulatus str. Bath] Length = 114 Score = 41.4 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 42/91 (46%), Gaps = 5/91 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59 +++ + + G + ++ +++ + + + +VDLS + +D+ G +++ Sbjct: 7 TQDNVDIVELGGRLVMADAAQARSELLAVVRR--GTGRLVVDLSDVGFVDSSGLSVLIAA 64 Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 +E+ GK+ L G+S I+ L L Sbjct: 65 FKAIEERSGKMVLAGLSPEIQALLELTRLNE 95 >gi|21233628|ref|NP_639545.1| hypothetical protein XCC4211 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770593|ref|YP_245355.1| hypothetical protein XC_4300 [Xanthomonas campestris pv. campestris str. 8004] gi|21115497|gb|AAM43427.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575925|gb|AAY51335.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] Length = 102 Score = 41.4 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 12/97 (12%), Positives = 38/97 (39%), Gaps = 8/97 (8%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + NG T +G ++++ + + + + +DLS + +D+ G ++ Sbjct: 12 LQRNGDT-LAVSGVLDRAAVTDLWPRALAQL-----AGARTLDLSGVQRLDSAGVAMLAE 65 Query: 61 FMEKYH--GKIKLQGVSTHIEQLFSLISFTHRKKIKN 95 + G + G ++ +++L + + + Sbjct: 66 LAARLRSNGNGTVVGKASGLDELCAAYRLSPSLDFQA 102 >gi|226329323|ref|ZP_03804841.1| hypothetical protein PROPEN_03228 [Proteus penneri ATCC 35198] gi|225202509|gb|EEG84863.1| hypothetical protein PROPEN_03228 [Proteus penneri ATCC 35198] Length = 91 Score = 41.4 bits (96), Expect = 0.23, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 8/85 (9%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 V F G + + K++ +D I+D+SA+ ID+ G L ++ ME+ Sbjct: 7 VLYFQGTLDRETLLSVWQQ-----RKALLADINIIDISALGHIDSTGLALFVHLKAEMEE 61 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89 + + +QGVS + L +L Sbjct: 62 RNRQFIIQGVSERFQTLITLYDLDE 86 >gi|304413075|ref|ZP_07394548.1| cytoplasmic protein with a STAS domain [Candidatus Regiella insecticola LSR1] gi|304283918|gb|EFL92311.1| cytoplasmic protein with a STAS domain [Candidatus Regiella insecticola LSR1] Length = 98 Score = 41.4 bits (96), Expect = 0.23, Method: Composition-based stats. Identities = 12/84 (14%), Positives = 35/84 (41%), Gaps = 9/84 (10%) Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM----EKYH 66 G+ + + + +D +D++ + +D+ G L+++ + ++ + Sbjct: 16 LQGDLDRDTLLPLWQQRNKLL-----TDIDCIDVTQLHRVDSAGLALLVHLIHFKSQQQN 70 Query: 67 GKIKLQGVSTHIEQLFSLISFTHR 90 K+ + G+S + L L + R Sbjct: 71 IKLAISGISDQLATLIKLYNLPGR 94 >gi|253686690|ref|YP_003015880.1| hypothetical protein PC1_0285 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753268|gb|ACT11344.1| conserved hypothetical protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 98 Score = 41.4 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 33/84 (39%), Gaps = 7/84 (8%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK--Y 65 G+ + +S+ ++D+S + +D+ G L+M+ ++ Sbjct: 15 TLALTGDLDRETLLPFWQQ-----RESLLMGKTVLDVSGLNRVDSAGLALLMHVYQQPSS 69 Query: 66 HGKIKLQGVSTHIEQLFSLISFTH 89 +I + G S ++ L +L + Sbjct: 70 GREITIVGASDRLKTLIALYNLNE 93 >gi|269126689|ref|YP_003300059.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183] gi|268311647|gb|ACY98021.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183] Length = 117 Score = 41.4 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 32/81 (39%), Gaps = 4/81 (4%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 TV G + + V A ++D++A+T +D+ G ++ ++ Sbjct: 19 TVLELTGELDLAGLPALRRRVDEACAAP-GPPRLVIDMAAVTFMDSCGLGGLVRCWKRVG 77 Query: 67 ---GKIKLQGVSTHIEQLFSL 84 G+ L G+ + ++ + Sbjct: 78 ERQGRFILVGLRPQVARVLDI 98 >gi|62181817|ref|YP_218234.1| STAS domain-containing protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|168231920|ref|ZP_02656978.1| putative stas domain protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168819621|ref|ZP_02831621.1| putative stas domain protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194470672|ref|ZP_03076656.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|198244440|ref|YP_002217280.1| hypothetical protein SeD_A3668 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204931203|ref|ZP_03221997.1| putative stas domain protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205354210|ref|YP_002228011.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858557|ref|YP_002245208.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224585106|ref|YP_002638905.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238910103|ref|ZP_04653940.1| possible anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|62129450|gb|AAX67153.1| putative STAS domain [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|194457036|gb|EDX45875.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197938956|gb|ACH76289.1| putative stas domain protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204319970|gb|EDZ05176.1| putative stas domain protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205273991|emb|CAR38997.1| possible anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205333847|gb|EDZ20611.1| putative stas domain protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205343356|gb|EDZ30120.1| putative stas domain protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|206710360|emb|CAR34718.1| possible anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224469634|gb|ACN47464.1| possible anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|320087754|emb|CBY97518.1| Uncharacterized protein yrbB [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322615313|gb|EFY12234.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618328|gb|EFY15219.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622867|gb|EFY19711.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626811|gb|EFY23608.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631380|gb|EFY28140.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635353|gb|EFY32067.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643352|gb|EFY39916.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647076|gb|EFY43577.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648879|gb|EFY45324.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655071|gb|EFY51382.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657674|gb|EFY53942.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664170|gb|EFY60368.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667453|gb|EFY63615.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674701|gb|EFY70793.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675666|gb|EFY71739.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682302|gb|EFY78325.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684905|gb|EFY80903.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322716306|gb|EFZ07877.1| STAS domain-containing protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323195890|gb|EFZ81061.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199007|gb|EFZ84104.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204293|gb|EFZ89302.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207640|gb|EFZ92587.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211307|gb|EFZ96151.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214751|gb|EFZ99500.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221231|gb|EGA05657.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224028|gb|EGA08321.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230323|gb|EGA14442.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233299|gb|EGA17393.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239336|gb|EGA23386.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242413|gb|EGA26439.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246923|gb|EGA30889.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254144|gb|EGA37964.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255261|gb|EGA39038.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262724|gb|EGA46280.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264034|gb|EGA47542.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269420|gb|EGA52875.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326625059|gb|EGE31404.1| STAS domain-containing protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326629332|gb|EGE35675.1| STAS domain-containing protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 98 Score = 41.4 bits (96), Expect = 0.25, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 8/80 (10%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 AG ++ + D V A+ + +DLS I+ +DT G L+ + +K Sbjct: 13 TLVLAGELDQDVLAPLWDARVEAM-----TGVTRIDLSQISRVDTGGLALLAHLVNQAKK 67 Query: 65 YHGKIKLQGVSTHIEQLFSL 84 + L GV+ + L L Sbjct: 68 QGNAVSLSGVNDKVYALAQL 87 >gi|83589261|ref|YP_429270.1| anti-sigma-factor antagonist domain-containing protein [Moorella thermoacetica ATCC 39073] gi|83572175|gb|ABC18727.1| anti-sigma-factor antagonist (STAS) domain protein [Moorella thermoacetica ATCC 39073] Length = 109 Score = 41.4 bits (96), Expect = 0.25, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 36/86 (41%), Gaps = 8/86 (9%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 E +V R AG I+++ ++ + +D SA+ +D+ GA L++ Sbjct: 11 EKDRSVLRVAGELDFSNINQLQQEIERQ-----DTKIVEIDCSALQFMDSSGAGLLLSIA 65 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLI 85 + + +++ + HI +I Sbjct: 66 RVLNLQNRILEITHIPEHIYHDLDII 91 >gi|296534459|ref|ZP_06896891.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957] gi|296265215|gb|EFH11408.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957] Length = 58 Score = 41.4 bits (96), Expect = 0.26, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 5/53 (9%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA 55 + V R G + + + + ++ A + +DLS +T +DT GA Sbjct: 11 DRQGEVLRLRGAYTTQSVGPVWQGLLRAAR-----GATRLDLSGVTALDTTGA 58 >gi|162450573|ref|YP_001612940.1| hypothetical protein sce2301 [Sorangium cellulosum 'So ce 56'] gi|161161155|emb|CAN92460.1| hypothetical protein sce2301 [Sorangium cellulosum 'So ce 56'] Length = 298 Score = 41.4 bits (96), Expect = 0.26, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 37/86 (43%), Gaps = 4/86 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G+ V G + ++ ++++ + + Q+ AI+D++ + +IDT A ++ Sbjct: 182 QGVLVLPLVGALDAARAQQMMENLLGKVVER-QARVAIIDVTGVPDIDTASASALLQVAR 240 Query: 64 K---YHGKIKLQGVSTHIEQLFSLIS 86 ++ L G+ + Q + Sbjct: 241 AVRLLGAQVVLTGIRPEVSQAIVRLD 266 >gi|317121979|ref|YP_004101982.1| anti-sigma-factor antagonist [Thermaerobacter marianensis DSM 12885] gi|315591959|gb|ADU51255.1| anti-sigma-factor antagonist [Thermaerobacter marianensis DSM 12885] Length = 117 Score = 41.0 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 13/107 (12%), Positives = 35/107 (32%), Gaps = 4/107 (3%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62 + R AG++ +E+ + + D +V+L + ID+ G ++ Sbjct: 11 TLIARLAGDFD-EHGAEVFRHAIERAVRRRAYDHLVVNLQQVGFIDSSGLGALLGRYRRA 69 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 + ++ + G + + + R + +P Sbjct: 70 REDGARVSVVGAPPPVRAVLQMAGLPQRIPLYPDEPAALGAARGVGR 116 >gi|319651420|ref|ZP_08005549.1| anti-sigma F factor antagonist [Bacillus sp. 2_A_57_CT2] gi|317396951|gb|EFV77660.1| anti-sigma F factor antagonist [Bacillus sp. 2_A_57_CT2] Length = 116 Score = 41.0 bits (95), Expect = 0.28, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 39/82 (47%), Gaps = 4/82 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62 + R +G E+ + AI + I++L ++ +D+ G +I+ + Sbjct: 13 VLCIRLSGELDHHSADELREQATRAIEEH-DIHHIILNLEQLSFMDSSGLGVILGRYKQI 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSL 84 ++ HG++ + +S +++LF + Sbjct: 72 KQKHGEMVVCAISPAVQRLFDM 93 >gi|29826775|ref|NP_821409.1| anti-sigma factor antagonist [Streptomyces avermitilis MA-4680] gi|29603871|dbj|BAC67944.1| putative anti-sigma factor antagonist [Streptomyces avermitilis MA-4680] Length = 162 Score = 41.0 bits (95), Expect = 0.29, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 35/85 (41%), Gaps = 5/85 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MY 60 +GI + G + + ++ I + + D +T +D+ G ++ Sbjct: 62 DGIRIVVLRGEIDHANRDSLHEALL--IPEGEAEPRTVADFRGVTFMDSSGINVLITAHR 119 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLI 85 + G ++L GV ++++ +L+ Sbjct: 120 AAQDAGGWLRLAGVQEPVQRVLALV 144 >gi|309388695|gb|ADO76575.1| anti-sigma-factor antagonist [Halanaerobium praevalens DSM 2228] Length = 115 Score = 41.0 bits (95), Expect = 0.30, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 43/85 (50%), Gaps = 3/85 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 E V +F G +++ + V + + + D I+DL+ ++ +D+ G L++ Sbjct: 11 EANKAVIKFEGEVNFENSNQLKEKVKAELITNEEVDVLIIDLAQVSYLDSSGVGLLLSLF 70 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSL 84 FM+K G +K+ + ++++F + Sbjct: 71 KFMQKRDGSLKVVNPNAKLKRVFDV 95 >gi|165976708|ref|YP_001652301.1| putative anti-sigma factor B antagonist [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|307246206|ref|ZP_07528287.1| hypothetical protein appser1_14100 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307250540|ref|ZP_07532484.1| hypothetical protein appser4_13200 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307255186|ref|ZP_07537004.1| hypothetical protein appser9_14220 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259624|ref|ZP_07541348.1| hypothetical protein appser11_14220 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|165876809|gb|ABY69857.1| putative anti-sigma factor B antagonist [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|306852815|gb|EFM85039.1| hypothetical protein appser1_14100 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306857433|gb|EFM89545.1| hypothetical protein appser4_13200 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306862059|gb|EFM94035.1| hypothetical protein appser9_14220 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866269|gb|EFM98133.1| hypothetical protein appser11_14220 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 117 Score = 41.0 bits (95), Expect = 0.30, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 28/90 (31%), Gaps = 3/90 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 N + +G + + ++ + DL + +D+ G L+ Sbjct: 13 QNNESLFVKLSGELTRDTLLPLWRQRASFLSPK-GNQHIYWDLKDLERVDSAGFTLLAEL 71 Query: 62 MEKYHGKIK--LQGVSTHIEQLFSLISFTH 89 + Y + L V ++ L L T Sbjct: 72 LNYYQKQTPNCLIHVPEVVKTLADLFDLTD 101 >gi|83646437|ref|YP_434872.1| anti-anti-sigma regulatory factor [Hahella chejuensis KCTC 2396] gi|83634480|gb|ABC30447.1| Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Hahella chejuensis KCTC 2396] Length = 88 Score = 41.0 bits (95), Expect = 0.31, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 31/81 (38%), Gaps = 9/81 (11%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 G +E + ++ +DLS +TE+D G +L++ + K Sbjct: 14 LTLNGELTIYCAAEAKAPL-------LEHKDIDIDLSQLTELDGAGLQLLI--LAKRDRG 64 Query: 69 IKLQGVSTHIEQLFSLISFTH 89 +L S + ++FSL Sbjct: 65 ARLVNASEAVNKVFSLTGLAD 85 >gi|291614052|ref|YP_003524209.1| anti-sigma-factor antagonist [Sideroxydans lithotrophicus ES-1] gi|291584164|gb|ADE11822.1| anti-sigma-factor antagonist [Sideroxydans lithotrophicus ES-1] Length = 108 Score = 41.0 bits (95), Expect = 0.32, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 6/89 (6%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S +G F G +E+ D + IN +D +DLS ++EID+ G +L++ Sbjct: 7 SSSGKAGFAIEGELTIYRAAELKDVIYPHIN---HADVIEIDLSRVSEIDSAGLQLLVSA 63 Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLISF 87 + ++ L G S ++++ L Sbjct: 64 KLEAMIRDKQLHLVGHSKPVQEMLDLCDL 92 >gi|157373329|ref|YP_001471929.1| hypothetical protein Ssed_0188 [Shewanella sediminis HAW-EB3] gi|157315703|gb|ABV34801.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3] Length = 98 Score = 41.0 bits (95), Expect = 0.32, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 27/67 (40%), Gaps = 6/67 (8%) Query: 16 KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK---IKLQ 72 I I + + +D+S ++ +DT GA+L+ F + + + ++ Q Sbjct: 13 TIRNIQPIFARLSELLT---HDKLLHIDVSQLSRVDTAGAQLLYLFSQTCNARSLKVEWQ 69 Query: 73 GVSTHIE 79 G + Sbjct: 70 GGQPELR 76 >gi|78355071|ref|YP_386520.1| anti-anti-sigma regulatory factor, SpoIIAA [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217476|gb|ABB36825.1| anti-anti-sigma regulatory factor, SpoIIAA [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 105 Score = 41.0 bits (95), Expect = 0.32, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 38/92 (41%), Gaps = 7/92 (7%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +S+NG + G +++ + I S + ++D+ ++ ID+ G L++ Sbjct: 8 ISDNGALI--LEGEIDYSVAAQVRTALHRHIESS--GGAVVLDMEKVSYIDSTGLALLIE 63 Query: 61 FMEKYH---GKIKLQGVSTHIEQLFSLISFTH 89 K +I++ S + QLF L Sbjct: 64 LRRKLQEQSREIRISAASVRVRQLFELTQIAP 95 >gi|213586477|ref|ZP_03368303.1| hypothetical protein SentesTyph_36473 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 77 Score = 41.0 bits (95), Expect = 0.32, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 25/72 (34%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++I+ Sbjct: 5 ALAALGHSGIKTVRTFGRAGLMLFNAIIGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGV 64 Query: 177 VTGAVIAQQGAF 188 G V+ QG Sbjct: 65 FIGMVLGLQGYL 76 >gi|303250630|ref|ZP_07336827.1| putative anti-sigma factor B antagonist [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307252923|ref|ZP_07534811.1| hypothetical protein appser6_14340 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650618|gb|EFL80777.1| putative anti-sigma factor B antagonist [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306859561|gb|EFM91586.1| hypothetical protein appser6_14340 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 117 Score = 41.0 bits (95), Expect = 0.32, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 29/90 (32%), Gaps = 3/90 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 N + +G + + ++ + DL + +D+ G L++ Sbjct: 13 QNNESLFVKLSGELTRDTLLPLWKQRASFLSPK-GNQHIYWDLKDLERVDSAGFTLLVEL 71 Query: 62 MEKYHGKIK--LQGVSTHIEQLFSLISFTH 89 + Y + L V ++ L L T Sbjct: 72 LNYYQKQTPNCLIHVPEVVKTLADLFDLTD 101 >gi|192361462|ref|YP_001983402.1| STAS domain-containing protein [Cellvibrio japonicus Ueda107] gi|190687627|gb|ACE85305.1| STAS domain protein [Cellvibrio japonicus Ueda107] Length = 101 Score = 41.0 bits (95), Expect = 0.33, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 36/80 (45%), Gaps = 3/80 (3%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 T F G +S++ D + + S +DL +++E+DT G +L++ F+ ++ Sbjct: 11 TTTLVFDGELTIYTVSQLKDALFA--EPEVSSAKVALDLQSVSELDTAGVQLLL-FIRQF 67 Query: 66 HGKIKLQGVSTHIEQLFSLI 85 + + V +L + Sbjct: 68 FSAVAKEVVLAKTNELVDAV 87 >gi|309378877|emb|CBX22464.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 92 Score = 41.0 bits (95), Expect = 0.34, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 28/79 (35%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + G+ ++E D+ + ++ VD + D+ L++ + + Sbjct: 9 ILHIGGDITVKTLTE--DEFERFRQQCRLKETIAVDFGGVKRADSACVSLLLEILRRRKD 66 Query: 68 KIKLQGVSTHIEQLFSLIS 86 I L G+ + L L Sbjct: 67 SIGLTGIPESVRALSELYE 85 >gi|85713025|ref|ZP_01044062.1| STAS domain protein [Idiomarina baltica OS145] gi|85693128|gb|EAQ31089.1| STAS domain protein [Idiomarina baltica OS145] Length = 100 Score = 40.6 bits (94), Expect = 0.36, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 39/91 (42%), Gaps = 7/91 (7%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 ++ +G AG+ I + + +N+ VD++ +T IDT G +++ Sbjct: 10 LANDGT--LSLAGSLTRSAIPAQWNALSQLLNEKT---VKQVDVAEVTLIDTAGVAILLE 64 Query: 61 FMEKYHGKIKLQ--GVSTHIEQLFSLISFTH 89 ++ + LQ G S + Q+ ++ H Sbjct: 65 VIKHNRDAVPLQCKGSSEQLRQIVTVSGVDH 95 >gi|312961185|ref|ZP_07775690.1| sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas fluorescens WH6] gi|311284843|gb|EFQ63419.1| sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas fluorescens WH6] Length = 112 Score = 40.6 bits (94), Expect = 0.36, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 6/87 (6%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 GI G ++E+A ++ + + + +DLS +TEID G +L+ Sbjct: 9 EGIARVGIEGELTIYTVAELAAEL---LPQLGTAPRLELDLSQVTEIDGAGLQLLAVIHR 65 Query: 64 KYHG---KIKLQGVSTHIEQLFSLISF 87 + + L G S + Q L + Sbjct: 66 EAAAGGTPVSLVGQSQAVTQTLQLCAA 92 >gi|238793700|ref|ZP_04637322.1| Anti-sigma B factor antagonist [Yersinia intermedia ATCC 29909] gi|238726941|gb|EEQ18473.1| Anti-sigma B factor antagonist [Yersinia intermedia ATCC 29909] Length = 106 Score = 40.6 bits (94), Expect = 0.38, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 33/99 (33%), Gaps = 14/99 (14%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---- 63 G + + + + +D+S + +D+ G L+++F E Sbjct: 13 TLVLQGELDRETLLPLWQQREALL-----AGKTRIDVSQLQRVDSSGLALLVHFRELHFL 67 Query: 64 -----KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97 K + + GVS + L L + ++ + Sbjct: 68 HEPQSKPGVSLMITGVSDRLSTLIELYNLQQIIPVEMAR 106 >gi|24375437|ref|NP_719480.1| SpoIIAA family protein [Shewanella oneidensis MR-1] gi|24350281|gb|AAN56924.1|AE015826_9 SpoIIAA family protein [Shewanella oneidensis MR-1] Length = 94 Score = 40.6 bits (94), Expect = 0.38, Method: Composition-based stats. Identities = 11/84 (13%), Positives = 32/84 (38%), Gaps = 4/84 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + G ++ + +++ D+ I+ LS + D+ G ++ + Sbjct: 6 QQGNICHLKGRLSQDQVIALWPQRQSLLSQ----DTQILSLSELEYSDSAGVAFLLALVR 61 Query: 64 KYHGKIKLQGVSTHIEQLFSLISF 87 ++ ++L S +++L L Sbjct: 62 QHATPLQLCSASAQLKKLIDLYDL 85 >gi|157372589|ref|YP_001480578.1| anti-sigma-factor antagonist [Serratia proteamaculans 568] gi|157324353|gb|ABV43450.1| anti-sigma-factor antagonist [Serratia proteamaculans 568] Length = 99 Score = 40.6 bits (94), Expect = 0.39, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 41/86 (47%), Gaps = 10/86 (11%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S+ + R G + + + +++ +D ++D++ + +D+ G L+++ Sbjct: 8 SQQQTLILR--GELDRETLLPLWEQ-----RETLLADITVLDVTQLQRVDSSGLALLVHL 60 Query: 62 ME---KYHGKIKLQGVSTHIEQLFSL 84 E ++ ++K+ G S ++ L +L Sbjct: 61 REQQRQHGVELKISGASDRLKTLITL 86 >gi|330954309|gb|EGH54569.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae Cit 7] Length = 96 Score = 40.6 bits (94), Expect = 0.41, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 6/87 (6%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--- 58 S N + G ++E+A ++ I + + VDLS +TE+D G +L+ Sbjct: 7 STNDTARVQIDGELTIYTVTELAARLLPQIGAAAR---LEVDLSQVTEMDGAGLQLLAVI 63 Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLI 85 K + L G S + + F L Sbjct: 64 QREAGKTGTSLHLTGQSKAVSETFELC 90 >gi|157373876|ref|YP_001472476.1| SpoIIAA family protein [Shewanella sediminis HAW-EB3] gi|157316250|gb|ABV35348.1| SpoIIAA family protein [Shewanella sediminis HAW-EB3] Length = 100 Score = 40.6 bits (94), Expect = 0.41, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 42/83 (50%), Gaps = 5/83 (6%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E+G+ V R +G E+ ++ + ++KS+Q ++DLSA++ D+ G ++ + Sbjct: 6 EDGV-VCRVSGRLSQVEVVKLWSERDTLMSKSVQ----VIDLSALSYSDSAGVAFLLELL 60 Query: 63 EKYHGKIKLQGVSTHIEQLFSLI 85 + + +S+ QL LI Sbjct: 61 SLAKSESRKLVLSSPSIQLLKLI 83 >gi|149191258|ref|ZP_01869514.1| anti-anti-sigma regulatory factor [Vibrio shilonii AK1] gi|148834928|gb|EDL51909.1| anti-anti-sigma regulatory factor [Vibrio shilonii AK1] Length = 110 Score = 40.6 bits (94), Expect = 0.42, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 36/99 (36%), Gaps = 4/99 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + N G++ + E + I+ VDLS + +D+ G I+Y Sbjct: 8 TNNHTLKLELYGDFDARGSREAQPQIDDIIHNDW-HQEIEVDLSQVRFMDSSGIGAIVYL 66 Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97 ++ K++L+ V+ Q+ L+ + Sbjct: 67 YKRLVERERKMRLENVTGQPLQIIQLLRIGQAIPVNTHA 105 >gi|167854681|ref|ZP_02477461.1| hypothetical protein HPS_01277 [Haemophilus parasuis 29755] gi|167854218|gb|EDS25452.1| hypothetical protein HPS_01277 [Haemophilus parasuis 29755] Length = 112 Score = 40.6 bits (94), Expect = 0.45, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 28/89 (31%), Gaps = 3/89 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 N + + +G + + ++ DL +T ID+ G L+ Sbjct: 13 QNNESLMVQLSGELTRDTLLPLWKQRASFLSPK-SLQHIYWDLKGLTSIDSSGFTLLAEL 71 Query: 62 MEKYHGKIK--LQGVSTHIEQLFSLISFT 88 + Y K K L V + L L Sbjct: 72 LHLYQQKNKNCLFNVPQAVHSLAELFDLA 100 >gi|323499084|ref|ZP_08104064.1| putative anti-sigma F factor antagonist [Vibrio sinaloensis DSM 21326] gi|323315919|gb|EGA68950.1| putative anti-sigma F factor antagonist [Vibrio sinaloensis DSM 21326] Length = 106 Score = 40.6 bits (94), Expect = 0.45, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 4/95 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 I GN + S A + I +D S + +D+ G I+Y ++ Sbjct: 12 ILTLVINGNLDADG-SRNAQPHIDEIIADKSEREIEIDFSHVQFLDSSGVGAIVYLYKRL 70 Query: 66 ---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97 ++++ VS ++ +L+ + +QK Sbjct: 71 IERQRSMRIENVSGQPLEIMNLLRIDQAIPVNSQK 105 >gi|188993826|ref|YP_001905836.1| hypothetical protein xccb100_4431 [Xanthomonas campestris pv. campestris str. B100] gi|167735586|emb|CAP53804.1| hypothetical protein xcc-b100_4431 [Xanthomonas campestris pv. campestris] Length = 97 Score = 40.2 bits (93), Expect = 0.45, Method: Composition-based stats. Identities = 12/97 (12%), Positives = 38/97 (39%), Gaps = 8/97 (8%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + NG T +G ++++ + + + + +DLS + +D+ G ++ Sbjct: 7 LQRNGDT-LAVSGVLDRAAVTDLWPRALAQL-----AGARTLDLSGVQRLDSAGVAMLAE 60 Query: 61 FMEKYH--GKIKLQGVSTHIEQLFSLISFTHRKKIKN 95 + G + G ++ +++L + + + Sbjct: 61 LAARLRSNGNGTVVGKASGLDELCAAYRLSPSLDFQA 97 >gi|56415238|ref|YP_152313.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197364168|ref|YP_002143805.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56129495|gb|AAV79001.1| possible anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197095645|emb|CAR61213.1| possible anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 98 Score = 40.2 bits (93), Expect = 0.46, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 8/80 (10%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 AG ++ + D V A+ + +DLS I+ +DT G L+ + +K Sbjct: 13 TLMLAGELDQDVLAPLWDARVEAM-----TGVTRIDLSQISRVDTGGLALLAHLVNQAKK 67 Query: 65 YHGKIKLQGVSTHIEQLFSL 84 + L GV+ + L L Sbjct: 68 QGNAVSLSGVNDKVYALAQL 87 >gi|32035040|ref|ZP_00135106.1| COG3113: Predicted NTP binding protein (contains STAS domain) [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208754|ref|YP_001053979.1| hypothetical protein APL_1288 [Actinobacillus pleuropneumoniae L20] gi|190150608|ref|YP_001969133.1| hypothetical protein APP7_1339 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303252082|ref|ZP_07338251.1| putative anti-sigma factor B antagonist [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248313|ref|ZP_07530338.1| hypothetical protein appser2_12910 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307257354|ref|ZP_07539124.1| hypothetical protein appser10_13520 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307263953|ref|ZP_07545556.1| hypothetical protein appser13_13610 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|126097546|gb|ABN74374.1| hypothetical protein APL_1288 [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|189915739|gb|ACE61991.1| hypothetical protein APP7_1339 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302649064|gb|EFL79251.1| putative anti-sigma factor B antagonist [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306855183|gb|EFM87361.1| hypothetical protein appser2_12910 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306864204|gb|EFM96117.1| hypothetical protein appser10_13520 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306870715|gb|EFN02456.1| hypothetical protein appser13_13610 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 117 Score = 40.2 bits (93), Expect = 0.46, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 28/90 (31%), Gaps = 3/90 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 N + +G + + ++ + DL + +D+ G L+ Sbjct: 13 QNNESLFVKLSGELTRDTLLPLWKQRASFLSPK-GNQHIYWDLKDLERVDSAGFTLLAEL 71 Query: 62 MEKYHGKIK--LQGVSTHIEQLFSLISFTH 89 + Y + L V ++ L L T Sbjct: 72 LNYYQKQTPNCLIHVPEVVKTLADLFDLTD 101 >gi|294497068|ref|YP_003560768.1| anti-sigma B factor antagonist [Bacillus megaterium QM B1551] gi|295702433|ref|YP_003595508.1| anti-sigma B factor antagonist [Bacillus megaterium DSM 319] gi|294347005|gb|ADE67334.1| anti-sigma B factor antagonist [Bacillus megaterium QM B1551] gi|294800092|gb|ADF37158.1| anti-sigma B factor antagonist [Bacillus megaterium DSM 319] Length = 110 Score = 40.2 bits (93), Expect = 0.47, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 46/100 (46%), Gaps = 11/100 (11%) Query: 3 ENGITVFRFAG---NWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 + + AG + +P++ E ++ I IVDL+ ++ +D+ G + + Sbjct: 10 DGQAYRIKLAGEIDAYTAPKLKEKFMEITEHTEPEI-----IVDLTDVSYMDSTGLGVFI 64 Query: 60 YFM---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96 + +K +G +K GVS I++LF + T + +Q Sbjct: 65 ALLKANKKNNGSLKFVGVSERIKRLFDITGLTDILNVNSQ 104 >gi|332111478|gb|EGJ11461.1| hypothetical protein RBXJA2T_14076 [Rubrivivax benzoatilyticus JA2] Length = 100 Score = 40.2 bits (93), Expect = 0.47, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 32/82 (39%), Gaps = 1/82 (1%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 G +E+ + ++ A+ + D +DLSA+TE D+ G +L+M + Sbjct: 5 TLAIEGELTIYRAAELRETLLAALAAAPDGD-LTLDLSAVTEFDSAGVQLLMAAKKSAEA 63 Query: 68 KIKLQGVSTHIEQLFSLISFTH 89 + + + H + Sbjct: 64 RSRALRLVRHSPSVLDGFQVLD 85 >gi|295097678|emb|CBK86768.1| Predicted NTP binding protein (contains STAS domain) [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 97 Score = 40.2 bits (93), Expect = 0.47, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 36/86 (41%), Gaps = 9/86 (10%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + +G T G ++ + D A+ ++DL +T +DT G L+ + Sbjct: 8 ARDGET-LTLTGELDQDLLNPLWDARHNAMQ-----GVTLIDLHGVTRVDTAGIALLAHL 61 Query: 62 M---EKYHGKIKLQGVSTHIEQLFSL 84 + +K + L GVS ++ L L Sbjct: 62 VATGKKQGSSVTLTGVSDNVITLAQL 87 >gi|330872540|gb|EGH06689.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 96 Score = 40.2 bits (93), Expect = 0.49, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 6/85 (7%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MY 60 + + G ++E+A ++ I + + VDLS +TE+D G +L+ Sbjct: 9 DDTARIQIDGELTIYTVTELAARLLPQIGSAAR---VEVDLSHVTEMDGAGLQLLAVIQR 65 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLI 85 EK + L G S + + F L Sbjct: 66 EAEKTGTALHLTGQSKAVTETFELC 90 >gi|254380525|ref|ZP_04995891.1| hypothetical protein SSAG_00193 [Streptomyces sp. Mg1] gi|194339436|gb|EDX20402.1| hypothetical protein SSAG_00193 [Streptomyces sp. Mg1] Length = 172 Score = 40.2 bits (93), Expect = 0.50, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 35/82 (42%), Gaps = 6/82 (7%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 T G S + ++ ++ ++DLSA+T +D+ G +++ + Sbjct: 83 RTALTLTGALDMDTCSRVT---ATTDTLTLDGNTLVLDLSAVTFMDSSGLNMLLTLRNRA 139 Query: 66 H---GKIKLQGVSTHIEQLFSL 84 G ++L+G+ + +L + Sbjct: 140 EAEQGTLELRGLPGQVLRLLDI 161 >gi|330810306|ref|YP_004354768.1| hypothetical protein PSEBR_a3440 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378414|gb|AEA69764.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 94 Score = 40.2 bits (93), Expect = 0.50, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 36/90 (40%), Gaps = 6/90 (6%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59 + + G +++A + + + + +DLS ITE+D G +L++ Sbjct: 7 THDDTAQVHIDGELTIYTAADLAAQWLPHLGATPR---MALDLSQITEMDGAGLQLLLMV 63 Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLISFT 88 K ++ L G S + + +L + Sbjct: 64 QREAAKAGTQLTLTGQSKAVTETLALCNLV 93 >gi|206578164|ref|YP_002236397.1| hypothetical protein KPK_0520 [Klebsiella pneumoniae 342] gi|288933381|ref|YP_003437440.1| hypothetical protein Kvar_0498 [Klebsiella variicola At-22] gi|290511568|ref|ZP_06550937.1| hypothetical protein HMPREF0485_03339 [Klebsiella sp. 1_1_55] gi|206567222|gb|ACI08998.1| conserved hypothetical protein [Klebsiella pneumoniae 342] gi|288888110|gb|ADC56428.1| conserved hypothetical protein [Klebsiella variicola At-22] gi|289776561|gb|EFD84560.1| hypothetical protein HMPREF0485_03339 [Klebsiella sp. 1_1_55] Length = 96 Score = 40.2 bits (93), Expect = 0.50, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 31/80 (38%), Gaps = 8/80 (10%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEK 64 G + + + A + I+DLS T +DT G L+++ + + Sbjct: 13 TLALHGELDQDLLVPLWEARARATE-----GATIIDLSQTTRVDTAGLALLVHFVALIRR 67 Query: 65 YHGKIKLQGVSTHIEQLFSL 84 + +L S +++ L L Sbjct: 68 QGREAQLIAKSENLQTLIGL 87 >gi|209809117|ref|YP_002264655.1| hypothetical protein, putative anti-sigma factor antagonist [Aliivibrio salmonicida LFI1238] gi|208010679|emb|CAQ81066.1| hypothetical protein, putative anti-sigma factor antagonist [Aliivibrio salmonicida LFI1238] Length = 105 Score = 40.2 bits (93), Expect = 0.50, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 35/94 (37%), Gaps = 5/94 (5%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 V G+ + +I + I + + +DL+ + +D+ G I+Y ++ Sbjct: 12 TLVLSVQGDMDAVGCRDIQPTIDEVIEQ--EHRQVHIDLAQVAFLDSSGIGAIVYLYKRL 69 Query: 66 ---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96 +++Q +L L+ + + + Sbjct: 70 VEKERTMQIQNAHGQPLELLKLLRIENAIPVNSP 103 >gi|229822117|ref|YP_002883643.1| anti-sigma-factor antagonist [Beutenbergia cavernae DSM 12333] gi|229568030|gb|ACQ81881.1| anti-sigma-factor antagonist [Beutenbergia cavernae DSM 12333] Length = 128 Score = 40.2 bits (93), Expect = 0.51, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 31/83 (37%), Gaps = 3/83 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + + T AG ++AD V A + + +D + + +D+ G L+ Sbjct: 21 TTDDRTRIVLAGEIDVSLAGDLADAVGRA---ELAGNPTEIDAAQVAFMDSSGIALLARV 77 Query: 62 MEKYHGKIKLQGVSTHIEQLFSL 84 + G++ + + L + Sbjct: 78 ATRTPGRLAIISPPDVVRFLLEV 100 >gi|117620668|ref|YP_855579.1| anti-sigma-B factor antagonist [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562075|gb|ABK39023.1| anti-sigma-B factor antagonist [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 108 Score = 40.2 bits (93), Expect = 0.53, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 26/59 (44%), Gaps = 3/59 (5%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 TV AG +E+ + + + +DLS ++E+D+ G +L++ + Sbjct: 12 TVVTIAGEMTIYTAAELKQALTPLLYRQ---QELELDLSQVSEMDSAGLQLLLAAKKTA 67 >gi|225174856|ref|ZP_03728853.1| anti-sigma-factor antagonist [Dethiobacter alkaliphilus AHT 1] gi|225169496|gb|EEG78293.1| anti-sigma-factor antagonist [Dethiobacter alkaliphilus AHT 1] Length = 111 Score = 40.2 bits (93), Expect = 0.54, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 34/91 (37%), Gaps = 4/91 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62 V R G + I D + + + + + S + +D+ G +++ + Sbjct: 11 TLVVRMTGELDHHAVDGIRDRLDRKLAVE-HIKNVVFNFSGVQFMDSSGLGMVLGRYKLI 69 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 + GK+ +S + ++F L R + Sbjct: 70 SEKGGKVLACSLSPRVSRVFDLAGLQSRIPV 100 >gi|149921651|ref|ZP_01910100.1| sigma-B regulator RsbR [Plesiocystis pacifica SIR-1] gi|149817495|gb|EDM76965.1| sigma-B regulator RsbR [Plesiocystis pacifica SIR-1] Length = 318 Score = 40.2 bits (93), Expect = 0.54, Method: Composition-based stats. Identities = 13/91 (14%), Positives = 37/91 (40%), Gaps = 4/91 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G+ G+ + + + ++ AI S + A++D++ + IDT A+ ++ + Sbjct: 210 DGVLALPLLGSLTTTRAQALMERLLEAIQAS-STRFALIDVTGVDTIDTATADHLLRVVR 268 Query: 64 K---YHGKIKLQGVSTHIEQLFSLISFTHRK 91 + + G+ + Q + + Sbjct: 269 ATAMLGTQCIVTGIQPAVAQTLVTLETNLEE 299 >gi|66044042|ref|YP_233883.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. syringae B728a] gi|63254749|gb|AAY35845.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. syringae B728a] gi|330971850|gb|EGH71916.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. aceris str. M302273PT] Length = 96 Score = 40.2 bits (93), Expect = 0.55, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 6/87 (6%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--- 58 S N + G ++E+A ++ I + + VDLS +TE+D G +L+ Sbjct: 7 SANDTARVQIDGELTIYTVTELAARLLPQIGAAAR---LEVDLSQVTEMDGAGLQLLAVI 63 Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLI 85 K + L G S + + F L Sbjct: 64 QREAGKTGTSLHLTGQSKAVSETFELC 90 >gi|298485494|ref|ZP_07003578.1| STAS domain protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160000|gb|EFI01037.1| STAS domain protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 96 Score = 40.2 bits (93), Expect = 0.57, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 6/87 (6%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--- 58 ++ T + G ++E+A + + K + VDLS +TE+D G +L+ Sbjct: 7 NQADATRVQIDGELTIYTVTELAARL---LPKITGAARVEVDLSQVTEMDGAGLQLLAVI 63 Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLI 85 K +++ G S + + F L Sbjct: 64 QREAGKTGTSLRMTGQSKAVTETFELC 90 >gi|291615989|ref|YP_003518731.1| YrbB [Pantoea ananatis LMG 20103] gi|291151019|gb|ADD75603.1| YrbB [Pantoea ananatis LMG 20103] gi|327396241|dbj|BAK13663.1| anti-sigma factor antagonist YrbB [Pantoea ananatis AJ13355] Length = 98 Score = 40.2 bits (93), Expect = 0.57, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 34/80 (42%), Gaps = 8/80 (10%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---K 64 R G + + + +N ++D+SA+ +D+ G L+++ E + Sbjct: 13 TLRLEGELDRDTLLSLWEQREALVNA-----VELIDVSALQRVDSSGLALLVHLREITSQ 67 Query: 65 YHGKIKLQGVSTHIEQLFSL 84 G ++ G+ ++ L +L Sbjct: 68 QGGSLRFVGIGDKLQSLITL 87 >gi|256828162|ref|YP_003156890.1| anti-sigma-factor antagonist [Desulfomicrobium baculatum DSM 4028] gi|256577338|gb|ACU88474.1| anti-sigma-factor antagonist [Desulfomicrobium baculatum DSM 4028] Length = 117 Score = 40.2 bits (93), Expect = 0.57, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 43/81 (53%), Gaps = 5/81 (6%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 TVFR G + +E+ V++ +++ + I+D S + I++ G +++ ++ H Sbjct: 12 TVFRIKGRLDATSTTELEQKVLLRLDRGVTH--LIMDFSELEYINSAGLRILVMSYQRLH 69 Query: 67 ---GKIKLQGVSTHIEQLFSL 84 G++ + GV +I ++F + Sbjct: 70 SRGGQVMVCGVRDYIAEIFEI 90 >gi|261342636|ref|ZP_05970494.1| putative STAS domain protein [Enterobacter cancerogenus ATCC 35316] gi|288315284|gb|EFC54222.1| putative STAS domain protein [Enterobacter cancerogenus ATCC 35316] Length = 97 Score = 40.2 bits (93), Expect = 0.57, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 38/80 (47%), Gaps = 8/80 (10%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EK 64 + G ++ + D V A+ ++DL+++T +DT G ++ + + +K Sbjct: 13 TLKLKGELDQDLLNPLWDARVDAMK-----GVTLIDLNSVTRVDTAGVAMLAHLVAVGKK 67 Query: 65 YHGKIKLQGVSTHIEQLFSL 84 + +++L G S ++ L L Sbjct: 68 HGTQVRLAGASDNVVTLAQL 87 >gi|330966331|gb|EGH66591.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. actinidiae str. M302091] Length = 96 Score = 40.2 bits (93), Expect = 0.58, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 6/85 (7%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MY 60 + + G ++E+A ++ I + + VDLS +TE+D G +L+ Sbjct: 9 DDTARIQIDGELTIYTVTELAARLLPQIGSAAR---VEVDLSHVTEMDGAGLQLLAVIQR 65 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLI 85 EK + L G S + + F L Sbjct: 66 EAEKTGTALHLTGQSKAVTETFELC 90 >gi|302555986|ref|ZP_07308328.1| anti-sigma factor antagonist [Streptomyces viridochromogenes DSM 40736] gi|302473604|gb|EFL36697.1| anti-sigma factor antagonist [Streptomyces viridochromogenes DSM 40736] Length = 160 Score = 40.2 bits (93), Expect = 0.58, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 2/67 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 E G TV F G SEIA + ++ + ++DLS I D G L+ Sbjct: 50 QERGHTVLEFCGEIDLAAASEIAPHLDRETDR--PAARVVIDLSGIEFFDCSGLRLLYRA 107 Query: 62 MEKYHGK 68 + + Sbjct: 108 RSRVLDR 114 >gi|114776921|ref|ZP_01451964.1| anti-sigma factor antagonist, putative [Mariprofundus ferrooxydans PV-1] gi|114553007|gb|EAU55438.1| anti-sigma factor antagonist, putative [Mariprofundus ferrooxydans PV-1] Length = 109 Score = 40.2 bits (93), Expect = 0.58, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 34/88 (38%), Gaps = 5/88 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---M 59 +N + R G+ + +++ + S++ +D + +D+ G + + Sbjct: 13 DNQAVLLRVKGDVTIHTSPRLREELKPLFSASMKEVHVALD--DVGFMDSSGIATLVEGL 70 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISF 87 + G L G+S ++ +F L Sbjct: 71 QWARMTGGHFVLSGLSENVRDVFELAKL 98 >gi|283836262|ref|ZP_06356003.1| putative STAS domain protein [Citrobacter youngae ATCC 29220] gi|291067626|gb|EFE05735.1| putative STAS domain protein [Citrobacter youngae ATCC 29220] Length = 97 Score = 39.8 bits (92), Expect = 0.59, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 8/79 (10%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EKY 65 AG ++ + D V A+ + +DL+ ++ +DT G L+++ + ++ Sbjct: 14 LVLAGELDQDVLNPLWDARVEAMQ-----GVSCIDLNQVSRVDTGGLALLLHLIDQGKQQ 68 Query: 66 HGKIKLQGVSTHIEQLFSL 84 ++ L GV+ + L L Sbjct: 69 GNRVSLAGVNDKVYTLAQL 87 >gi|329911604|ref|ZP_08275574.1| hypothetical protein IMCC9480_548 [Oxalobacteraceae bacterium IMCC9480] gi|327545838|gb|EGF30955.1| hypothetical protein IMCC9480_548 [Oxalobacteraceae bacterium IMCC9480] Length = 100 Score = 39.8 bits (92), Expect = 0.60, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 27/59 (45%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 +G +++E + A+ SD ++DL+ +TE D G +L++ F + Sbjct: 6 ITISGELTIYQVAETRALLQRALTDHDGSDQLMLDLAGVTECDGAGVQLLLAFSQAVAA 64 >gi|261819646|ref|YP_003257752.1| hypothetical protein Pecwa_0292 [Pectobacterium wasabiae WPP163] gi|261603659|gb|ACX86145.1| conserved hypothetical protein [Pectobacterium wasabiae WPP163] Length = 96 Score = 39.8 bits (92), Expect = 0.62, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 36/89 (40%), Gaps = 7/89 (7%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + + G+ + +S+ ++ +D+S + +D+ G L+M+ Sbjct: 8 QAQESTLALIGDLDRETLLPFWQQ-----RESLLAEKTTLDVSGLNRVDSAGLALLMHVY 62 Query: 63 EK--YHGKIKLQGVSTHIEQLFSLISFTH 89 ++ +I + G S ++ L +L + Sbjct: 63 QQPYSGDEITIVGASDRLKTLIALYNLNE 91 >gi|15644192|ref|NP_229241.1| anti-sigma factor antagonist, putative [Thermotoga maritima MSB8] gi|170289123|ref|YP_001739361.1| anti-sigma-factor antagonist [Thermotoga sp. RQ2] gi|281412788|ref|YP_003346867.1| anti-sigma-factor antagonist [Thermotoga naphthophila RKU-10] gi|7227948|sp|Q9X1F5|Y1442_THEMA RecName: Full=Putative anti-sigma factor antagonist TM_1442 gi|55670421|pdb|1VC1|A Chain A, Crystal Structure Of The Tm1442 Protein From Thermotoga Maritima, A Homolog Of The Bacillus Subtilis General Stress Response Anti-Anti-Sigma Factor Rsbv gi|55670422|pdb|1VC1|B Chain B, Crystal Structure Of The Tm1442 Protein From Thermotoga Maritima, A Homolog Of The Bacillus Subtilis General Stress Response Anti-Anti-Sigma Factor Rsbv gi|58176711|pdb|1SBO|A Chain A, Solution Structure Of Putative Anti Sigma Factor Antagonist From Thermotoga Maritima (Tm1442) gi|4982007|gb|AAD36511.1|AE001796_3 anti-sigma factor antagonist, putative [Thermotoga maritima MSB8] gi|170176626|gb|ACB09678.1| anti-sigma-factor antagonist [Thermotoga sp. RQ2] gi|281373891|gb|ADA67453.1| anti-sigma-factor antagonist [Thermotoga naphthophila RKU-10] Length = 110 Score = 39.8 bits (92), Expect = 0.62, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 43/89 (48%), Gaps = 1/89 (1%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + ++ + R G+ + SE+ + + I+ + + ++DLS+++ +D+ G ++ Sbjct: 9 VEQDDKAIVRVQGDIDAYNSSELKEQLRNFISTTSK-KKIVLDLSSVSYMDSAGLGTLVV 67 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 ++ K +S+ E + ++ TH Sbjct: 68 ILKDAKINGKEFILSSLKESISRILKLTH 96 >gi|238758305|ref|ZP_04619483.1| Anti-sigma B factor antagonist [Yersinia aldovae ATCC 35236] gi|238703428|gb|EEP95967.1| Anti-sigma B factor antagonist [Yersinia aldovae ATCC 35236] Length = 100 Score = 39.8 bits (92), Expect = 0.63, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 39/97 (40%), Gaps = 10/97 (10%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +S+ + G + + + + +D +D+S + +D+ G L+++ Sbjct: 8 LSQQETLI--LQGELDRETLLPLWQQREVLL-----ADKTHIDVSQLQRVDSSGLALLVH 60 Query: 61 FME---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIK 94 F E + + + GVS + L L + H ++ Sbjct: 61 FRELRARQGVSLTVIGVSDRLSTLIELYNLQHIIPVE 97 >gi|229818799|ref|YP_002880325.1| anti-sigma-factor antagonist [Beutenbergia cavernae DSM 12333] gi|229564712|gb|ACQ78563.1| anti-sigma-factor antagonist [Beutenbergia cavernae DSM 12333] Length = 124 Score = 39.8 bits (92), Expect = 0.63, Method: Composition-based stats. Identities = 14/100 (14%), Positives = 33/100 (33%), Gaps = 6/100 (6%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G V R W + + D ++D +T ID+ G I+ + Sbjct: 17 GGGVVIRI---WGEVDAALRDDASAAMAAVLADPGPVVIDARDVTFIDSTGLAFILQLHK 73 Query: 64 ---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100 + ++ L+ + + +L L + +++ Sbjct: 74 HGSEESREVVLRDPAPRLTELLELAAVGDLVRVERTPVPP 113 >gi|284045931|ref|YP_003396271.1| anti-sigma-factor antagonist [Conexibacter woesei DSM 14684] gi|283950152|gb|ADB52896.1| anti-sigma-factor antagonist [Conexibacter woesei DSM 14684] Length = 119 Score = 39.8 bits (92), Expect = 0.65, Method: Composition-based stats. Identities = 14/97 (14%), Positives = 37/97 (38%), Gaps = 5/97 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G R G + + + D + A + Q +DL +T +D+ G I+ + Sbjct: 23 GGTYRMRLRGEFDLAAVETVEDALARAFDGDTQ--LLEIDLGQLTFLDSSGLRTILEARD 80 Query: 64 KYHG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97 + +++L ++++F++ ++ Sbjct: 81 RAASSGVRLRLVRGIEPVQRVFAITGLEASLPFADEP 117 >gi|156935715|ref|YP_001439631.1| hypothetical protein ESA_03584 [Cronobacter sakazakii ATCC BAA-894] gi|156533969|gb|ABU78795.1| hypothetical protein ESA_03584 [Cronobacter sakazakii ATCC BAA-894] Length = 100 Score = 39.8 bits (92), Expect = 0.66, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 34/79 (43%), Gaps = 8/79 (10%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EKY 65 R G ++ + + +SI +DLS + +DT G L+++ + + Sbjct: 14 LRLNGTLDRETLTPLWEQ-----RQSITDGLQRIDLSGLERVDTAGLALLVHLVALTQAG 68 Query: 66 HGKIKLQGVSTHIEQLFSL 84 + L+G+S ++ L L Sbjct: 69 GRGVTLEGMSENLTTLAKL 87 >gi|300785987|ref|YP_003766278.1| fused protein kinase and phosphatase containing multi-sensor domain [Amycolatopsis mediterranei U32] gi|299795501|gb|ADJ45876.1| fused protein kinase and phosphatase containing multi-sensor domain [Amycolatopsis mediterranei U32] Length = 899 Score = 39.8 bits (92), Expect = 0.67, Method: Composition-based stats. Identities = 11/64 (17%), Positives = 27/64 (42%), Gaps = 1/64 (1%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G + G+ I E+ V+ ++ + + S +VDL+ + + + G L++ Sbjct: 799 GPLALKLTGDLDLATIGEVRPAVLASVEATA-TRSVVVDLTGLRYLSSCGVALLLDVAAV 857 Query: 65 YHGK 68 + Sbjct: 858 ARRR 861 >gi|15639529|ref|NP_218979.1| anti-sigma F factor antagonist (SpoIIAA-2) [Treponema pallidum subsp. pallidum str. Nichols] gi|189025768|ref|YP_001933540.1| anti-sigma F factor antagonist [Treponema pallidum subsp. pallidum SS14] gi|3322830|gb|AAC65524.1| anti-sigma F factor antagonist (spoIIAA-2) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018343|gb|ACD70961.1| anti-sigma F factor antagonist [Treponema pallidum subsp. pallidum SS14] Length = 123 Score = 39.8 bits (92), Expect = 0.67, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 43/108 (39%), Gaps = 5/108 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 GI V +G+ ++ D V+ ++ + ++DL A+ ID+ G +++Y Sbjct: 9 QSGGICVVDISGDMDLYHSYKLKDLVLKLFDRGPRC--IVIDLEAVEYIDSSGIGVLIYL 66 Query: 62 ---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106 ++K + GV ++++ L + I + S Sbjct: 67 CSTVKKLKIHFFISGVHGSVKKVIELTRLLNYFPIAESVDEALARARS 114 >gi|291545017|emb|CBL18126.1| anti-anti-sigma factor [Ruminococcus sp. 18P13] Length = 110 Score = 39.8 bits (92), Expect = 0.71, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 37/86 (43%), Gaps = 4/86 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--- 58 +E GI G ++ + + + + + I+D + +T +D+ G L+ Sbjct: 6 TEEGILRVMLQGEIDHHSAGQLREQIDCRLEELL-PKRLILDFTGVTFMDSSGIGLVMGR 64 Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSL 84 + Y G++++ + HI ++ L Sbjct: 65 VRQAAAYGGQVEIAVPAGHIRKVMQL 90 >gi|297162400|gb|ADI12112.1| hypothetical protein SBI_08994 [Streptomyces bingchenggensis BCW-1] Length = 1205 Score = 39.8 bits (92), Expect = 0.72, Method: Composition-based stats. Identities = 50/288 (17%), Positives = 89/288 (30%), Gaps = 53/288 (18%) Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 + GV I++L L+ K NL +G + +FI++ + Sbjct: 495 AVVGVIKTIKELKDLLMGILAKAASAIMKIIKDPIGFLGNLVRAVGAGLQQFISNIGTHL 554 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 GLV G + + ++ LI+ + G A + Sbjct: 555 Q-TGLVSWLLGTSAKAGIEIPSKF------------DLKGIIQLIASLLGLTWA-NIRAR 600 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA--IVAEIGSMKINEEIDAIRTM 247 +++ G ++ + + A+ G +G+A I AE G +K +D +++ Sbjct: 601 ITRKGVPDQ-----AMSAAEQSVPVAKALATEGPAGAAKEITAETGDLKSTI-LDDLKS- 653 Query: 248 GLDFVRILISPRIWALII-SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 LI I A I L LL + F + I I + A ++ Sbjct: 654 ------YLIPTVIIAGITWILSLLNPASAFVRAVKGIIDIVTFIVNQGAQIVEFVNAVLD 707 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 I I S + K V T + SI Sbjct: 708 ---------------AVIAI--------ANGGSAGVPKMVETALAASI 732 >gi|120600240|ref|YP_964814.1| SpoIIAA family protein [Shewanella sp. W3-18-1] gi|146291830|ref|YP_001182254.1| SpoIIAA family protein [Shewanella putrefaciens CN-32] gi|120560333|gb|ABM26260.1| SpoIIAA family protein [Shewanella sp. W3-18-1] gi|145563520|gb|ABP74455.1| SpoIIAA family protein [Shewanella putrefaciens CN-32] gi|319425065|gb|ADV53139.1| phospholipid transport-associated protein, MlaB [Shewanella putrefaciens 200] Length = 94 Score = 39.8 bits (92), Expect = 0.72, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 30/81 (37%), Gaps = 4/81 (4%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 TV G ++ + ++ Q ++ LS + D+ G ++ + ++ Sbjct: 9 TVCHLKGRLSQTQVIALWSQRHSLLSPQTQ----VLSLSGLEYSDSAGVAFLLALVSEHK 64 Query: 67 GKIKLQGVSTHIEQLFSLISF 87 + L S +++L L Sbjct: 65 TPLALSSASQQLKKLIDLYDL 85 >gi|296268344|ref|YP_003650976.1| anti-sigma-factor antagonist [Thermobispora bispora DSM 43833] gi|296091131|gb|ADG87083.1| anti-sigma-factor antagonist [Thermobispora bispora DSM 43833] Length = 115 Score = 39.8 bits (92), Expect = 0.73, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 38/103 (36%), Gaps = 10/103 (9%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 TV G + E+ V+ AI VDL+A+ IDT G +++ + K Sbjct: 15 TVLSLRGELDLYAVDELRRPVLTAIAAH--GPWLAVDLTAVNFIDTTGLGMLVRLLNKLR 72 Query: 67 ---GKIKLQGVSTHIEQLFS-----LISFTHRKKIKNQKPQRS 101 G + L G ++++ + +P R+ Sbjct: 73 EKNGDLALIGPRGQVKRILQWTNLNRLFPVFDSAAAIPEPARN 115 >gi|291059916|gb|ADD72651.1| anti-sigma F factor antagonist [Treponema pallidum subsp. pallidum str. Chicago] Length = 121 Score = 39.8 bits (92), Expect = 0.73, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 43/108 (39%), Gaps = 5/108 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 GI V +G+ ++ D V+ ++ + ++DL A+ ID+ G +++Y Sbjct: 7 QSGGICVVDISGDMDLYHSYKLKDLVLKLFDRGPRC--IVIDLEAVEYIDSSGIGVLIYL 64 Query: 62 ---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106 ++K + GV ++++ L + I + S Sbjct: 65 CSTVKKLKIHFFISGVHGSVKKVIELTRLLNYFPIAESVDEALARARS 112 >gi|170077903|ref|YP_001734541.1| anti-anti-sigma factor [Synechococcus sp. PCC 7002] gi|169885572|gb|ACA99285.1| anti-anti-sigma factor [Synechococcus sp. PCC 7002] Length = 109 Score = 39.8 bits (92), Expect = 0.73, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 44/85 (51%), Gaps = 4/85 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG---AELIM 59 +N I VF G + + + E DD++ +I + + + ++D + IT +D+ G L++ Sbjct: 2 DNKIAVFHPTGIFDNIKSLEFKDDLLKSIIEE-KKEVVVLDFAGITFMDSAGLGSLVLLL 60 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSL 84 + + K+ L V+ ++ LF L Sbjct: 61 KTVRSHGAKMILCNVNEQVQMLFEL 85 >gi|271498873|ref|YP_003331898.1| anti-sigma-factor antagonist [Dickeya dadantii Ech586] gi|270342428|gb|ACZ75193.1| anti-sigma-factor antagonist [Dickeya dadantii Ech586] Length = 97 Score = 39.5 bits (91), Expect = 0.78, Method: Composition-based stats. Identities = 12/85 (14%), Positives = 30/85 (35%), Gaps = 8/85 (9%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 G + + + + S ++D+ + +D+ G L+++F E+ Sbjct: 13 TLYLEGCLDRNSLLPLWQQRDALL-----AGSRVLDVGQVERVDSAGLALLVHFYHQQEQ 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89 + + G S + L L + Sbjct: 68 QGTPMTITGASERLRTLIQLYNLNE 92 >gi|322834658|ref|YP_004214685.1| anti-sigma-factor antagonist [Rahnella sp. Y9602] gi|321169859|gb|ADW75558.1| anti-sigma-factor antagonist [Rahnella sp. Y9602] Length = 104 Score = 39.5 bits (91), Expect = 0.79, Method: Composition-based stats. Identities = 12/85 (14%), Positives = 33/85 (38%), Gaps = 8/85 (9%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E+ G + D + + + S +D+S + +D+ G +++ Sbjct: 8 ESQPPRLMLHGELDRETLVAFWD-----MRRKLMSGVTCLDVSGLERVDSSGLAFLVHLR 62 Query: 63 EKYHGK---IKLQGVSTHIEQLFSL 84 E+ + + + G++ + L +L Sbjct: 63 EEARQQGITLTIAGITDRLRTLITL 87 >gi|257440907|ref|ZP_05616662.1| anti-sigma F factor antagonist [Faecalibacterium prausnitzii A2-165] gi|257196687|gb|EEU94971.1| anti-sigma F factor antagonist [Faecalibacterium prausnitzii A2-165] Length = 104 Score = 39.5 bits (91), Expect = 0.80, Method: Composition-based stats. Identities = 12/87 (13%), Positives = 31/87 (35%), Gaps = 4/87 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59 + + + AG + + A+ + ++DL + +D+ G LI+ Sbjct: 8 AADDLLYAYLAGEIDHDAAQNLRIQLDDALLAR-TPKTLVLDLGGVGFMDSSGVGLILGR 66 Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLI 85 G +++Q + ++ L Sbjct: 67 QRCARSLGGTLRIQHAPEQLRRVLRLA 93 >gi|296166009|ref|ZP_06848461.1| anti-sigma factor antagonist [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898630|gb|EFG78184.1| anti-sigma factor antagonist [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 126 Score = 39.5 bits (91), Expect = 0.81, Method: Composition-based stats. Identities = 9/82 (10%), Positives = 28/82 (34%), Gaps = 3/82 (3%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTI---GAELIMYFM 62 + G+ + + D + + +DL+A+ D+ G L+ Sbjct: 13 TARLQVRGDLVYETVDAMVDAADRLLGQQPTPADLHLDLAALEFCDSAGLSGLLLVHRRS 72 Query: 63 EKYHGKIKLQGVSTHIEQLFSL 84 + ++ L ++++ + Sbjct: 73 HQAGARLHLDNRPRFLDRILDV 94 >gi|281209456|gb|EFA83624.1| hypothetical protein PPL_02690 [Polysphondylium pallidum PN500] Length = 810 Score = 39.5 bits (91), Expect = 0.81, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 55/142 (38%), Gaps = 27/142 (19%) Query: 202 LMSILQLREIGVLL--TAVMIAGRSGSAIVAEIGSMKINEEI---DAIRTMGL-DFVRIL 255 L+ ++++G + A+M +V ++G + + +E+ + + MGL D V Sbjct: 207 LVVEDIIKDMGPIFFFAALMF------NVVIQLGQIVLEKELKLREGMNMMGLKDSVYWF 260 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD-IPFAVFFSRFHST----ATLANI 310 ++ L+ +++ F + I + ++ F FF F T Sbjct: 261 TWT------VTNILVNVISCFVLVAAGYIFQFDFFKKNNFGTFFVLFLLFGISMVTFVFF 314 Query: 311 FTGLIK----APFMACAIGIVA 328 + LIK A + I ++ Sbjct: 315 LSTLIKRADIATSIGFVIFLIG 336 >gi|289674998|ref|ZP_06495888.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. syringae FF5] Length = 100 Score = 39.5 bits (91), Expect = 0.83, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 6/83 (7%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MYFM 62 T + G ++E+A ++ I + + VDLS +TE+D G +L+ Sbjct: 15 TTRVQIDGELTIYTVTELAARLLPQIGAAAR---LEVDLSQVTEMDGAGLQLLAVIQREA 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLI 85 K + L G S + + F L Sbjct: 72 GKTGTSLHLTGQSKAVSETFELC 94 >gi|222055351|ref|YP_002537713.1| anti-sigma-factor antagonist [Geobacter sp. FRC-32] gi|221564640|gb|ACM20612.1| anti-sigma-factor antagonist [Geobacter sp. FRC-32] Length = 120 Score = 39.5 bits (91), Expect = 0.83, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 V + +G + E+ ++ A+ + +DL+ +TE+D G +L+ Sbjct: 18 LVVKVSGPLTVQNVGELKTSLLQALE---GGEQLCLDLAGVTEVDLAGLQLLC 67 >gi|308069567|ref|YP_003871172.1| Anti-sigma F factor antagonist (Stage II sporulation protein AA) [Paenibacillus polymyxa E681] gi|310642624|ref|YP_003947382.1| anti-sigma f factor antagonist [Paenibacillus polymyxa SC2] gi|305858846|gb|ADM70634.1| Anti-sigma F factor antagonist (Stage II sporulation protein AA) [Paenibacillus polymyxa E681] gi|309247574|gb|ADO57141.1| Anti-sigma F factor antagonist [Paenibacillus polymyxa SC2] Length = 117 Score = 39.5 bits (91), Expect = 0.86, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 37/83 (44%), Gaps = 4/83 (4%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YF 61 G+ + R +G + + AI + Q + ++ L + +D+ G +I+ Sbjct: 12 GVLIVRLSGELDHHTSDMVRMQMDEAIQRR-QCEHIVLSLKNLQFMDSSGLGVILGRYKL 70 Query: 62 MEKYHGKIKLQGVSTHIEQLFSL 84 +++ GK+ + V+ + +L + Sbjct: 71 IKQKGGKMAVCDVNPPVHRLLDM 93 >gi|251791362|ref|YP_003006083.1| anti-sigma-factor antagonist [Dickeya zeae Ech1591] gi|247539983|gb|ACT08604.1| anti-sigma-factor antagonist [Dickeya zeae Ech1591] Length = 97 Score = 39.5 bits (91), Expect = 0.88, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 31/85 (36%), Gaps = 8/85 (9%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 + G + + + S ++D+ + +D+ G L+++F E+ Sbjct: 13 ILFLEGCLDRNSLLPLWQQRNALLAAS-----RVLDVEQVERVDSAGLALLVHFYHQQEQ 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89 +K+ G S + L L + Sbjct: 68 QGTPMKITGASERLRTLIQLYNLNE 92 >gi|120402490|ref|YP_952319.1| anti-sigma-factor antagonist [Mycobacterium vanbaalenii PYR-1] gi|119955308|gb|ABM12313.1| anti-sigma-factor antagonist [Mycobacterium vanbaalenii PYR-1] Length = 128 Score = 39.5 bits (91), Expect = 0.89, Method: Composition-based stats. Identities = 9/90 (10%), Positives = 32/90 (35%), Gaps = 5/90 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---M 59 + V R G+ + + + +A+ + +VD++ + + + G ++ Sbjct: 19 QGAALVLRVTGDLDAMTAPTLVTHLDIALADA--PPVVVVDMTDVEFLSSAGISVLVETH 76 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 E+ +++ + F ++ Sbjct: 77 RLAERADISLRVVADGPATSRPFRMMRLDE 106 >gi|167770369|ref|ZP_02442422.1| hypothetical protein ANACOL_01712 [Anaerotruncus colihominis DSM 17241] gi|167667691|gb|EDS11821.1| hypothetical protein ANACOL_01712 [Anaerotruncus colihominis DSM 17241] Length = 130 Score = 39.5 bits (91), Expect = 0.91, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 47/109 (43%), Gaps = 6/109 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60 + + G+ E+ + + A+ K+ Q+ + +D +T +D+ G L+M Sbjct: 16 DELVTAHIIGDIDHHNAREMRETIDDAVLKA-QARALELDFRDVTFMDSSGIGLVMGRYK 74 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 M++ G +++ ++ H++++ L + KP+R + Sbjct: 75 LMQEVGGSLRVVNIAGHLKKVMMLAGLDRLAVMD--KPERRVTAGHIEK 121 >gi|319788636|ref|YP_004148111.1| hypothetical protein Psesu_3057 [Pseudoxanthomonas suwonensis 11-1] gi|317467148|gb|ADV28880.1| hypothetical protein Psesu_3057 [Pseudoxanthomonas suwonensis 11-1] Length = 103 Score = 39.5 bits (91), Expect = 0.92, Method: Composition-based stats. Identities = 12/99 (12%), Positives = 33/99 (33%), Gaps = 7/99 (7%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + V G + + + + + + ++L AI +D+ G L+ Sbjct: 10 ARREGEVLHLEGRLDRAAVVALWPRL-----QPLVDGARTLELGAIQSLDSAGLALLAET 64 Query: 62 MEKYH--GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 + G +++ G + + +L + + P Sbjct: 65 AARMRASGPVQVGGDAPGLAELRAAYRLDPQLNYAGAPP 103 >gi|118465979|ref|YP_879574.1| hypothetical protein MAV_0285 [Mycobacterium avium 104] gi|118167266|gb|ABK68163.1| hypothetical protein MAV_0285 [Mycobacterium avium 104] Length = 274 Score = 39.5 bits (91), Expect = 0.93, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 34/111 (30%), Gaps = 8/111 (7%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + G+W +P+ + + A +A L +IDT A L+ E Sbjct: 89 EAACLLMLNGDWTAPQYALLRAAYESA-------GAATW-LLQPGDIDTRLARLLWQHRE 140 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI 114 + K G + + + R+ F+NL I Sbjct: 141 SWRYSTKAYGGTPLDHDREERQRWADDAAARLGIDLRAGRSGGFENLIEEI 191 >gi|220931544|ref|YP_002508452.1| anti-sigma-factor antagonist spoIIAA [Halothermothrix orenii H 168] gi|219992854|gb|ACL69457.1| anti-sigma-factor antagonist spoIIAA [Halothermothrix orenii H 168] Length = 120 Score = 39.5 bits (91), Expect = 0.94, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 35/81 (43%), Gaps = 4/81 (4%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFME 63 + R +G + E D + + ++ I++L + ID+ G I+ ++ Sbjct: 12 LIVRLSGELDMHSVPEFKDKTIK-LMENNNLKHLILNLKGVKFIDSSGVGAILGRYRDLK 70 Query: 64 KYHGKIKLQGVSTHIEQLFSL 84 GK+ L + +E++F L Sbjct: 71 DKGGKVMLVSLKPQVEKIFEL 91 >gi|89099053|ref|ZP_01171932.1| anti-sigma F factor antagonist (stage II sporulation protein AA) [Bacillus sp. NRRL B-14911] gi|89086183|gb|EAR65305.1| anti-sigma F factor antagonist (stage II sporulation protein AA) [Bacillus sp. NRRL B-14911] Length = 116 Score = 39.5 bits (91), Expect = 0.94, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 40/84 (47%), Gaps = 4/84 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60 N + R +G E+ + AI S +++L ++ +D+ G +I+ Sbjct: 11 NDVLCIRLSGELDHHSADELREKATNAIE-SYGIRHIVLNLEQLSFMDSSGLGVILGRYK 69 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSL 84 +++ HG++ + +S +++LF + Sbjct: 70 QIKQLHGEMVVCAISPAVQRLFDM 93 >gi|156741105|ref|YP_001431234.1| anti-sigma-factor antagonist [Roseiflexus castenholzii DSM 13941] gi|156232433|gb|ABU57216.1| anti-sigma-factor antagonist [Roseiflexus castenholzii DSM 13941] Length = 117 Score = 39.5 bits (91), Expect = 0.94, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 34/85 (40%), Gaps = 5/85 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---M 59 ++GIT+ R G +++ + + I DL ++ +D+ G + + Sbjct: 9 DDGITIVRMDGRLDLVTAAQVKQQLTELVAS--GHRRLIFDLDRVSFVDSSGLGALISGL 66 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSL 84 + G +++ + + L +L Sbjct: 67 KVARQAGGDLRIARANQQVRTLLNL 91 >gi|238918534|ref|YP_002932048.1| hypothetical protein NT01EI_0584 [Edwardsiella ictaluri 93-146] gi|238868102|gb|ACR67813.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 104 Score = 39.5 bits (91), Expect = 0.95, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 35/92 (38%), Gaps = 6/92 (6%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME-K 64 + G + + EI + + A +D+S ++ +D+ G L+++ + Sbjct: 13 GAILYLQGVLECDSLGEIWQQRQALL-----TGIACLDISELSRVDSAGLALLLHVQNLR 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96 I L+G+S + L +L + Sbjct: 68 PEMPIPLRGISDRLRTLITLYNLQEIVPCAAP 99 >gi|238756120|ref|ZP_04617441.1| Anti-sigma B factor antagonist [Yersinia ruckeri ATCC 29473] gi|238705659|gb|EEP98055.1| Anti-sigma B factor antagonist [Yersinia ruckeri ATCC 29473] Length = 100 Score = 39.5 bits (91), Expect = 0.98, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E+ G+ + + +++ +D +D++ + +D+ G L+++ Sbjct: 8 ESQQHTLLLIGDLDRETLMPLWQQ-----RETLLADKTCLDVAQLQRVDSSGLALLVHLR 62 Query: 63 EKYHGK---IKLQGVSTHIEQLFSL 84 E+ H + + + GVS + L +L Sbjct: 63 EEQHQRGSDLIISGVSDRLATLITL 87 >gi|30250305|ref|NP_842375.1| STAS domain-containing protein [Nitrosomonas europaea ATCC 19718] gi|30181100|emb|CAD86292.1| STAS domain [Nitrosomonas europaea ATCC 19718] Length = 113 Score = 39.5 bits (91), Expect = 0.98, Method: Composition-based stats. Identities = 11/64 (17%), Positives = 33/64 (51%), Gaps = 3/64 (4%) Query: 26 DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY---HGKIKLQGVSTHIEQLF 82 +V+ + +I++D ++DL+ +T +D+ +++ +M +I+ + +++ L Sbjct: 36 EVIRTGDAAIKADDMLIDLAGVTWVDSSAVSMLLEWMRTAQTYDRRIEFINLPSNLADLI 95 Query: 83 SLIS 86 L Sbjct: 96 ELYD 99 >gi|295696442|ref|YP_003589680.1| anti-sigma-factor antagonist [Bacillus tusciae DSM 2912] gi|295412044|gb|ADG06536.1| anti-sigma-factor antagonist [Bacillus tusciae DSM 2912] Length = 116 Score = 39.5 bits (91), Expect = 0.99, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 38/85 (44%), Gaps = 4/85 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 +G+ V R G S+ V A+ + S + +LS ++ +D+ G +++ Sbjct: 10 RSGVVVARLRGELD-HHTSDGVRAKVDALLEETGSIRLLWNLSDLSFMDSSGLGVLLGRY 68 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSL 84 + + GK+ G++ + +L L Sbjct: 69 RRISQRGGKMACCGLTAPVRKLLEL 93 >gi|31789384|gb|AAP58501.1| putative anti-sigma factor antagonist [uncultured Acidobacteria bacterium] Length = 118 Score = 39.5 bits (91), Expect = 1.0, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 40/84 (47%), Gaps = 4/84 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY--- 60 +G+T+ G E E+ D + ++ + + +++L + ID+ G I+ Sbjct: 14 DGVTILDLKGKMTLGEGDELLKDKINSLIQQDR-KKLLLNLEGVPYIDSAGLGEIVRTYT 72 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSL 84 + + GK+KL ++ I+ L ++ Sbjct: 73 TVSRQGGKLKLLNLTKRIQDLLAI 96 >gi|33151496|ref|NP_872849.1| putative anti-sigma factor B antagonist [Haemophilus ducreyi 35000HP] gi|33147716|gb|AAP95238.1| putative anti-sigma factor B antagonist [Haemophilus ducreyi 35000HP] Length = 113 Score = 39.1 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 9/62 (14%), Positives = 23/62 (37%), Gaps = 1/62 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +NG G + + ++ +++ DL+ + ID+ G L++ Sbjct: 13 EQNGSLFVTLLGELTRDTLLPLWKQRASFLSNP-HNETIYWDLNHLLRIDSAGFALLIEL 71 Query: 62 ME 63 + Sbjct: 72 LN 73 >gi|71734111|ref|YP_273088.1| STAS domain-containing protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|289626912|ref|ZP_06459866.1| STAS domain-containing protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|71554664|gb|AAZ33875.1| STAS domain protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|330867350|gb|EGH02059.1| STAS domain-containing protein [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330987695|gb|EGH85798.1| STAS domain-containing protein [Pseudomonas syringae pv. lachrymans str. M301315] gi|331013008|gb|EGH93064.1| STAS domain-containing protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 96 Score = 39.1 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 6/87 (6%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--- 58 ++ T + G ++E+A ++ I + + VDLS +TE+D G +L+ Sbjct: 7 NQADATRVQIDGELTIYTVTELAARLLPQITGAAR---VEVDLSQVTEMDGAGLQLLAVI 63 Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLI 85 K +++ G S + + F L Sbjct: 64 QREAGKTGTSLRMTGQSKAVTETFELC 90 >gi|115372701|ref|ZP_01460007.1| stas domain, putative [Stigmatella aurantiaca DW4/3-1] gi|310823497|ref|YP_003955855.1| anti-sigma factor antagonist [Stigmatella aurantiaca DW4/3-1] gi|115370182|gb|EAU69111.1| stas domain, putative [Stigmatella aurantiaca DW4/3-1] gi|309396569|gb|ADO74028.1| anti-sigma factor antagonist [Stigmatella aurantiaca DW4/3-1] Length = 127 Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 36/86 (41%), Gaps = 5/86 (5%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME-- 63 + G ++ + +++ + + ++ A+VD S + +D G + ++ E Sbjct: 20 VETLCLEGELSEQDLHGVCEELFRRLQRGLR--QAVVDFSEVAHMDYRGVKGLVARAEGF 77 Query: 64 -KYHGKIKLQGVSTHIEQLFSLISFT 88 + G IKL G+S ++ + Sbjct: 78 RRAGGDIKLSGLSPYLAAILRAAGAH 103 >gi|54293820|ref|YP_126235.1| hypothetical protein lpl0876 [Legionella pneumophila str. Lens] gi|53753652|emb|CAH15110.1| hypothetical protein lpl0876 [Legionella pneumophila str. Lens] Length = 93 Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 32/78 (41%), Gaps = 4/78 (5%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEKY 65 F+ G + + D + A+ + + +DLS +T D+ G LI+ ++ Sbjct: 6 FKPGGELTFKSVVSVRDKLYKALMEDTRERFC-LDLSDVTHCDSAGLALIIEARKLCKQN 64 Query: 66 HGKIKLQGVSTHIEQLFS 83 + + G+S + L Sbjct: 65 NKVFDVIGISPETQSLAE 82 >gi|257483989|ref|ZP_05638030.1| STAS domain-containing protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289650982|ref|ZP_06482325.1| STAS domain-containing protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330890723|gb|EGH23384.1| STAS domain-containing protein [Pseudomonas syringae pv. mori str. 301020] Length = 100 Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 6/87 (6%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--- 58 ++ T + G ++E+A ++ I + + VDLS +TE+D G +L+ Sbjct: 11 NQADATRVQIDGELTIYTVTELAARLLPQITGAAR---VEVDLSQVTEMDGAGLQLLAVI 67 Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLI 85 K +++ G S + + F L Sbjct: 68 QREAGKTGTSLRMTGQSKAVTETFELC 94 >gi|257051283|ref|YP_003129116.1| putative PAS/PAC sensor protein [Halorhabdus utahensis DSM 12940] gi|256690046|gb|ACV10383.1| putative PAS/PAC sensor protein [Halorhabdus utahensis DSM 12940] Length = 255 Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 41/82 (50%), Gaps = 4/82 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G+ + G+ + + + ++++ I ++ ++ A++D++ + IDT A+ ++ + Sbjct: 143 DGVILTTVVGSLDTAKAERLTEELLDRIVEA-EASVALIDITGVAAIDTATAQHLIDTIN 201 Query: 64 K---YHGKIKLQGVSTHIEQLF 82 ++ + G+S I Q Sbjct: 202 AVNLLGARVVITGISPDIAQTL 223 >gi|317123693|ref|YP_004097805.1| anti-sigma-factor antagonist [Intrasporangium calvum DSM 43043] gi|315587781|gb|ADU47078.1| anti-sigma-factor antagonist [Intrasporangium calvum DSM 43043] Length = 127 Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 11/89 (12%) Query: 2 SENGITVFRFAGN---WKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI 58 TV G + +P + E D+ + A + IVDLS +T +D+ G ++ Sbjct: 9 DHGDRTVVHLGGEIDVYTAPFVREKLDEQIHAGRADL-----IVDLSEVTFLDSTGLGVL 63 Query: 59 ---MYFMEKYHGKIKLQGVSTHIEQLFSL 84 + F G +KL G S + ++F++ Sbjct: 64 VGRLKFARTRGGSLKLVGTSERVLRVFAI 92 >gi|261405988|ref|YP_003242229.1| anti-sigma-factor antagonist [Paenibacillus sp. Y412MC10] gi|329929790|ref|ZP_08283466.1| anti-sigma F factor antagonist [Paenibacillus sp. HGF5] gi|261282451|gb|ACX64422.1| anti-sigma-factor antagonist [Paenibacillus sp. Y412MC10] gi|328935768|gb|EGG32229.1| anti-sigma F factor antagonist [Paenibacillus sp. HGF5] Length = 117 Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62 + + R +G + + AI + Q++ ++ L + +D+ G +I+ F+ Sbjct: 13 VLIVRLSGELDHHTADHVRMQLDEAIQRR-QTEHLVLSLKDLDFMDSSGLGVILGRYKFI 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSL 84 ++ GK+ + V + +L + Sbjct: 72 KQKGGKMAVCDVKPQVYRLLDM 93 >gi|261401683|ref|ZP_05987808.1| conserved hypothetical protein [Neisseria lactamica ATCC 23970] gi|269208209|gb|EEZ74664.1| conserved hypothetical protein [Neisseria lactamica ATCC 23970] Length = 92 Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 11/80 (13%), Positives = 26/80 (32%), Gaps = 4/80 (5%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFMEKYH 66 + G+ ++ + + + I VD + D+ L++ + + Sbjct: 9 ILHIGGDITVKTLT---GEAFERFRQQCRLKETIAVDFGGVKRADSACVSLLLEILRRRK 65 Query: 67 GKIKLQGVSTHIEQLFSLIS 86 I L G+ + L L Sbjct: 66 DSIGLTGIPESVRALSELYE 85 >gi|302867451|ref|YP_003836088.1| sulfate transporter/antisigma-factor antagonist STAS [Micromonospora aurantiaca ATCC 27029] gi|315506139|ref|YP_004085026.1| sulfate transporter/antisigma-factor antagonist stas [Micromonospora sp. L5] gi|302570310|gb|ADL46512.1| Sulfate transporter/antisigma-factor antagonist STAS [Micromonospora aurantiaca ATCC 27029] gi|315412758|gb|ADU10875.1| Sulfate transporter/antisigma-factor antagonist STAS [Micromonospora sp. L5] Length = 188 Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Query: 17 SPEISEIADDVVMAI-NKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK 70 + + A V A+ +S++ D +VDLS + ID+ G L++ + + Sbjct: 82 AAHDLDPATAVRRALDERSLRDDMELVDLSGLEVIDSAGLSLLVRAHQDARRDGR 136 >gi|271964584|ref|YP_003338780.1| anti-anti-sigma regulatory factor-like protein [Streptosporangium roseum DSM 43021] gi|270507759|gb|ACZ86037.1| Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)-like protein [Streptosporangium roseum DSM 43021] Length = 126 Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 10/62 (16%), Positives = 25/62 (40%), Gaps = 1/62 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +G+++ AG + + A S IVD+ ++ D++G ++ + Sbjct: 18 RDGVSIIHVAGELDLATAPTLRRHLRAATLPSA-PPVLIVDVREVSFCDSVGLSELVLAL 76 Query: 63 EK 64 + Sbjct: 77 HR 78 >gi|271962372|ref|YP_003336568.1| anti-anti-sigma regulatory factor-like protein [Streptosporangium roseum DSM 43021] gi|270505547|gb|ACZ83825.1| Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)-like protein [Streptosporangium roseum DSM 43021] Length = 121 Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 37/87 (42%), Gaps = 4/87 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMA-INKSIQSDSAIVDLSAITEIDTIGAELIMY 60 S G V R G ++ A + + +S + ++DL+ +T D+ G +++ Sbjct: 15 SHGGAIVVRAVGELDYDYAPTFRRELTQAWTSGTGESPTLVLDLTGLTFCDSTGLAELLW 74 Query: 61 FMEK---YHGKIKLQGVSTHIEQLFSL 84 + + ++ L GVS + + + Sbjct: 75 MLRRSQESGTRLVLAGVSRTLRHMLTT 101 >gi|225019369|ref|ZP_03708561.1| hypothetical protein CLOSTMETH_03322 [Clostridium methylpentosum DSM 5476] gi|224948000|gb|EEG29209.1| hypothetical protein CLOSTMETH_03322 [Clostridium methylpentosum DSM 5476] Length = 112 Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 37/89 (41%), Gaps = 4/89 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60 +G+ G ++ + + + +S I+D + +T +D+ G L+M Sbjct: 9 DGVLTAYIMGE-IDHHTAKDIREEIDHVAESALPTLLILDFTDVTFMDSSGIGLVMGRYK 67 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 M++ G+ ++ S HI ++ L Sbjct: 68 LMKEIGGETRVTNPSPHINKVMRLAGLDR 96 >gi|213857282|ref|ZP_03384253.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 84 Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 8/77 (10%) Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEKYHG 67 AG ++ + D V A+N +DLS I+ +DT G L+ + +K Sbjct: 2 LAGELDQDVLAPLWDARVEAMN-----GVTRIDLSQISRVDTGGLALLAHLVNQAKKQGN 56 Query: 68 KIKLQGVSTHIEQLFSL 84 + L GV+ + L L Sbjct: 57 AVSLSGVNDKVYALAQL 73 >gi|269125130|ref|YP_003298500.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183] gi|268310088|gb|ACY96462.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183] Length = 120 Score = 39.1 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 42/89 (47%), Gaps = 5/89 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 +NG+ + + +G + + ++ I+K +VDLS +T +D+ G +++ Sbjct: 10 DNGVNIVKVSGEIDVFSSPRLREMLLDVIDK--GPLRLVVDLSDVTFLDSTGLGVLVGIY 67 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFT 88 + + +G + G + + ++F + T Sbjct: 68 HRLRARNGSMSFVGANDRVRRVFHITQLT 96 >gi|146313261|ref|YP_001178335.1| STAS domain-containing protein [Enterobacter sp. 638] gi|145320137|gb|ABP62284.1| putative STAS domain [Enterobacter sp. 638] Length = 97 Score = 39.1 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 8/80 (10%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EK 64 +G + + D A+ ++DL ++T +DT G L+++ + +K Sbjct: 13 TLFLSGELDQDLLIPLWDSREFAMQ-----GVTLIDLHSVTRVDTAGVALLVHLVAEGKK 67 Query: 65 YHGKIKLQGVSTHIEQLFSL 84 +KL GVS ++ L L Sbjct: 68 QGAAVKLAGVSENVLTLAKL 87 >gi|27365950|ref|NP_761478.1| Anti-anti-sigma regulatory factor [Vibrio vulnificus CMCP6] gi|37679817|ref|NP_934426.1| anti-anti-sigma regulatory factor [Vibrio vulnificus YJ016] gi|320156463|ref|YP_004188842.1| anti anti-sigma regulatory factor SypA [Vibrio vulnificus MO6-24/O] gi|27362099|gb|AAO11005.1| Anti-anti-sigma regulatory factor [Vibrio vulnificus CMCP6] gi|37198562|dbj|BAC94397.1| anti-anti-sigma regulatory factor [Vibrio vulnificus YJ016] gi|319931775|gb|ADV86639.1| anti anti-sigma regulatory factor SypA [Vibrio vulnificus MO6-24/O] Length = 106 Score = 39.1 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 39/97 (40%), Gaps = 4/97 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 GN+ + S A + + + + VD+S + +D+ G I+Y + Sbjct: 10 QQTLTLSIVGNFDA-HGSRQAQIHIDELINNDRHTDIEVDMSGVEFLDSSGIGAIVYLYK 68 Query: 64 KY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97 + ++++ V ++ SL+ H + +++ Sbjct: 69 RLVERERTMRIENVRGQPLEIISLLRIDHAIPVNSKQ 105 >gi|325916555|ref|ZP_08178821.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Xanthomonas vesicatoria ATCC 35937] gi|325537228|gb|EGD08958.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Xanthomonas vesicatoria ATCC 35937] Length = 109 Score = 39.1 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 31/81 (38%), Gaps = 3/81 (3%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 G +E+ + A+ +DL+A++EIDT G +L++ + Sbjct: 12 LTLALEGEMTIRRAAELKPLLQPALA---HPGGLHLDLAAVSEIDTTGLQLLLATKQAIQ 68 Query: 67 GKIKLQGVSTHIEQLFSLISF 87 + ++ +F +I Sbjct: 69 ADGRPFSLTDSSRAVFDVIEL 89 >gi|256377805|ref|YP_003101465.1| PAS/PAC sensor protein [Actinosynnema mirum DSM 43827] gi|255922108|gb|ACU37619.1| putative PAS/PAC sensor protein [Actinosynnema mirum DSM 43827] Length = 1017 Score = 39.1 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 8/61 (13%), Positives = 24/61 (39%), Gaps = 1/61 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + + V G+ + + + ++ ++ +DLS + + + G L++ Sbjct: 913 RDAVQVLHLGGDLDLDGVRALREFLLGRVD-VADRRPVELDLSGLGYLSSSGVALLLEAA 971 Query: 63 E 63 E Sbjct: 972 E 972 >gi|88811863|ref|ZP_01127116.1| STAS domain protein [Nitrococcus mobilis Nb-231] gi|88790747|gb|EAR21861.1| STAS domain protein [Nitrococcus mobilis Nb-231] Length = 119 Score = 39.1 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 12/92 (13%), Positives = 31/92 (33%), Gaps = 3/92 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S + G + ++ ++ Q VDL+ + +D+ G L++ + Sbjct: 8 SRDEEGRLALLGELTFETVPGLSKELDSMFK---QGPRLCVDLAGLERVDSAGLALLIEW 64 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 +QL +L + +++ Sbjct: 65 ARLTRTSGHALEFINTPQQLLTLARLSGVEQM 96 >gi|260596179|ref|YP_003208750.1| hypothetical protein CTU_03870 [Cronobacter turicensis z3032] gi|260215356|emb|CBA27356.1| Uncharacterized protein yrbB [Cronobacter turicensis z3032] Length = 100 Score = 39.1 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 35/85 (41%), Gaps = 8/85 (9%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E R G + + + +S+ +DLS + +DT G L+++ + Sbjct: 8 ERQGAQLRLNGTLDRETLLPLWEQ-----RQSLTDGLQRIDLSGLARVDTAGLALLVHLV 62 Query: 63 ---EKYHGKIKLQGVSTHIEQLFSL 84 + +KL+G+S ++ L L Sbjct: 63 ALTQAGGRGVKLEGMSENLTTLAKL 87 >gi|213970197|ref|ZP_03398328.1| STAS domain protein [Pseudomonas syringae pv. tomato T1] gi|302060004|ref|ZP_07251545.1| STAS domain protein [Pseudomonas syringae pv. tomato K40] gi|302130894|ref|ZP_07256884.1| STAS domain protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213925078|gb|EEB58642.1| STAS domain protein [Pseudomonas syringae pv. tomato T1] Length = 96 Score = 39.1 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 6/86 (6%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---M 59 + I + G ++E+A ++ I + + VDLS +TE+D G +L+ Sbjct: 8 RDDIAHMQIDGELTIYTVTELAARLLPQIAGAAR---VEVDLSHVTEMDGAGLQLLAVIQ 64 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLI 85 K + L G S + + F L Sbjct: 65 REAGKTGTALHLTGQSQAVTETFELC 90 >gi|302392457|ref|YP_003828277.1| anti-sigma-factor antagonist [Acetohalobium arabaticum DSM 5501] gi|302204534|gb|ADL13212.1| anti-sigma-factor antagonist [Acetohalobium arabaticum DSM 5501] Length = 112 Score = 39.1 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 36/81 (44%), Gaps = 3/81 (3%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFME 63 + R G+ + + + + + + I++L + ID+ G I+ + Sbjct: 12 LIVRIDGSLDLHTVDTLRKRIDEKLTGEVGIQNMILNLKNVDFIDSSGLGFIIGRYKQIN 71 Query: 64 KYHGKIKLQGVSTHIEQLFSL 84 + GK+K+ V+ I+Q+F L Sbjct: 72 NHGGKLKIINVNNSIKQVFEL 92 >gi|302189174|ref|ZP_07265847.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. syringae 642] gi|330943041|gb|EGH45484.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. pisi str. 1704B] Length = 96 Score = 39.1 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 8/89 (8%) Query: 2 SENGITVFRFA--GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI- 58 EN R G ++E+A ++ I + + VDLS +TE+D G +L+ Sbjct: 5 DENATDTARVQIDGELTIYTVTELAARLLPQIGAAAR---LEVDLSQVTEMDGAGLQLLA 61 Query: 59 --MYFMEKYHGKIKLQGVSTHIEQLFSLI 85 K + L G S + + F L Sbjct: 62 VIQREAGKTGTSLHLTGQSKAVSETFELC 90 >gi|324502188|gb|ADY40965.1| Anoctamin-4 [Ascaris suum] Length = 1065 Score = 39.1 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 57/142 (40%), Gaps = 8/142 (5%) Query: 52 TIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLH 111 +IGA L + ++YH ++ + E + ++ ++K + +R + Sbjct: 441 SIGATLFLEGWKRYHAELAWKWGLLDFEVDEETVRPEYQLRVKEARTKRLNPITQEMEPY 500 Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171 ++I++F S + L LV++ F ++ LL ++ ++ + Sbjct: 501 MPFRQRILRFFASSITVLFFLLLVMA----FVVGVVVYRIVLLQVLYRVDGMKQYA---- 552 Query: 172 ILISFVTGAVIAQQGAFQLSQF 193 +++F T A + LS F Sbjct: 553 SILTFTTAATLNLIVILILSYF 574 >gi|324502372|gb|ADY41044.1| Anoctamin-4 [Ascaris suum] Length = 1048 Score = 39.1 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 57/142 (40%), Gaps = 8/142 (5%) Query: 52 TIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLH 111 +IGA L + ++YH ++ + E + ++ ++K + +R + Sbjct: 441 SIGATLFLEGWKRYHAELAWKWGLLDFEVDEETVRPEYQLRVKEARTKRLNPITQEMEPY 500 Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171 ++I++F S + L LV++ F ++ LL ++ ++ + Sbjct: 501 MPFRQRILRFFASSITVLFFLLLVMA----FVVGVVVYRIVLLQVLYRVDGMKQYA---- 552 Query: 172 ILISFVTGAVIAQQGAFQLSQF 193 +++F T A + LS F Sbjct: 553 SILTFTTAATLNLIVILILSYF 574 >gi|330900452|gb|EGH31871.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. japonica str. M301072PT] gi|330977435|gb|EGH77382.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 100 Score = 39.1 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 8/89 (8%) Query: 2 SENGITVFRFA--GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI- 58 EN R G ++E+A ++ I + + VDLS +TE+D G +L+ Sbjct: 9 DENATDTARVQIDGELTIYTVTELAARLLPQIGAAAR---LEVDLSQVTEMDGAGLQLLA 65 Query: 59 --MYFMEKYHGKIKLQGVSTHIEQLFSLI 85 K + L G S + + F L Sbjct: 66 VIQREAGKTGTSLHLTGQSKAVSETFELC 94 >gi|3287905|sp|O32720|SP2AA_PAEPO RecName: Full=Anti-sigma F factor antagonist; AltName: Full=Stage II sporulation protein AA gi|2529265|gb|AAB81184.1| spoIIAA gene product [Paenibacillus polymyxa] Length = 117 Score = 39.1 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 36/83 (43%), Gaps = 4/83 (4%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YF 61 G+ + R +G + + AI + Q + ++ L + +D+ G +I+ Sbjct: 12 GVLIVRLSGELDHHTSDMVRMQMDEAIQRR-QCEHIVLSLKNLQFMDSSGLGVILGRYKL 70 Query: 62 MEKYHGKIKLQGVSTHIEQLFSL 84 + + G++ + V+ + +L + Sbjct: 71 INQKGGEMAVCDVNPPVHRLLDM 93 >gi|194100079|ref|YP_002003219.1| hypothetical protein NGK_2594 [Neisseria gonorrhoeae NCCP11945] gi|239998071|ref|ZP_04717995.1| hypothetical protein Ngon3_01103 [Neisseria gonorrhoeae 35/02] gi|240116990|ref|ZP_04731052.1| hypothetical protein NgonPID_00768 [Neisseria gonorrhoeae PID1] gi|240122628|ref|ZP_04735584.1| hypothetical protein NgonP_01551 [Neisseria gonorrhoeae PID332] gi|268593923|ref|ZP_06128090.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268602674|ref|ZP_06136841.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268681224|ref|ZP_06148086.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|193935369|gb|ACF31193.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945] gi|268547312|gb|EEZ42730.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268586805|gb|EEZ51481.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268621508|gb|EEZ53908.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] Length = 92 Score = 39.1 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 26/80 (32%), Gaps = 4/80 (5%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFMEKYH 66 G+ ++ D + + I VD + D+ L++ + Sbjct: 9 TLHIGGDITVKTLT---GDAFGRFRQQCRLKETIAVDFGGVKRADSACVSLLLEVLRGCK 65 Query: 67 GKIKLQGVSTHIEQLFSLIS 86 G ++L G+ + L L Sbjct: 66 GSVRLTGIPESVRALSELYE 85 >gi|30019157|ref|NP_830788.1| anti-sigma B factor antagonist [Bacillus cereus ATCC 14579] gi|229126410|ref|ZP_04255425.1| Anti-sigma factor antagonist [Bacillus cereus BDRD-Cer4] gi|29894700|gb|AAP07989.1| Anti-sigma B factor antagonist [Bacillus cereus ATCC 14579] gi|228656990|gb|EEL12813.1| Anti-sigma factor antagonist [Bacillus cereus BDRD-Cer4] Length = 112 Score = 39.1 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 44/93 (47%), Gaps = 7/93 (7%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVV-MAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 + +G + G + S++ + ++ +A K +Q +VD + +D+ G + + Sbjct: 9 LQNDGGYTVQLNGEIDAYTASDLKNKIMPIASEKEVQ---IVVDFHNVDYMDSTGLGVFI 65 Query: 60 YFM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89 + +K GK++ GVS +++LF + T Sbjct: 66 ALLKAVKKNDGKLEFIGVSKRLKRLFDITGLTE 98 >gi|261253023|ref|ZP_05945596.1| anti-anti-sigma regulatory factor [Vibrio orientalis CIP 102891] gi|260936414|gb|EEX92403.1| anti-anti-sigma regulatory factor [Vibrio orientalis CIP 102891] Length = 106 Score = 39.1 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 37/98 (37%), Gaps = 4/98 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + + IT GN + S A + I +D S + +D+ G I+Y Sbjct: 8 ANDTITTLIINGNLDADG-SRFAQPHIDEIIADNTQRDIEIDFSQVQFLDSSGVGAIVYL 66 Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96 ++ ++++ VS ++ +L+ + + Sbjct: 67 YKRLVERQRNMRIENVSGQPLEIINLLRIDQAIPVNSH 104 >gi|319638898|ref|ZP_07993656.1| hypothetical protein HMPREF0604_01280 [Neisseria mucosa C102] gi|317399802|gb|EFV80465.1| hypothetical protein HMPREF0604_01280 [Neisseria mucosa C102] Length = 105 Score = 39.1 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 30/79 (37%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 +G+ ++ A + ++DS +D S + + D+ L++ + + Sbjct: 22 TLYISGDVTVKTLTASAFARYEQQCRLKETDS--IDFSQVGKADSACVSLLLNALRRTDK 79 Query: 68 KIKLQGVSTHIEQLFSLIS 86 K +Q + + L L Sbjct: 80 KPTIQNIPDSVRALAELYE 98 >gi|284799476|ref|ZP_05984072.2| conserved hypothetical protein [Neisseria subflava NJ9703] gi|284797962|gb|EFC53309.1| conserved hypothetical protein [Neisseria subflava NJ9703] Length = 105 Score = 39.1 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 30/79 (37%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 +G+ ++ A + ++DS +D S + + D+ L++ + + Sbjct: 22 TLYISGDVTVKTLTASAFARYEQQCRLKETDS--IDFSQVGKADSACVSLLLNALRRTDK 79 Query: 68 KIKLQGVSTHIEQLFSLIS 86 K +Q + + L L Sbjct: 80 KPTIQNIPDSVRALAELYE 98 >gi|225077103|ref|ZP_03720302.1| hypothetical protein NEIFLAOT_02156 [Neisseria flavescens NRL30031/H210] gi|224951660|gb|EEG32869.1| hypothetical protein NEIFLAOT_02156 [Neisseria flavescens NRL30031/H210] Length = 105 Score = 39.1 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 30/79 (37%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 +G+ ++ A + ++DS +D S + + D+ L++ + + Sbjct: 22 TLYISGDVTVKTLTASAFARYEQQCRLKETDS--IDFSQVGKADSACVSLLLNALRRTDK 79 Query: 68 KIKLQGVSTHIEQLFSLIS 86 K +Q + + L L Sbjct: 80 KPTIQNIPDSVRALAELYE 98 >gi|308070733|ref|YP_003872338.1| Anti-sigma F factor antagonist (Stage II sporulation protein AA) [Paenibacillus polymyxa E681] gi|305860012|gb|ADM71800.1| Anti-sigma F factor antagonist (Stage II sporulation protein AA) [Paenibacillus polymyxa E681] Length = 112 Score = 39.1 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 38/86 (44%), Gaps = 5/86 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + +G+ +G ++ V+ + S I++L + ID+ G +++ Sbjct: 15 TTDGVNTVYLSGELDL-SVAPDFRLVMEPLVGE-SSQDLIINLRDLKYIDSTGIGILLSI 72 Query: 62 MEKYHG---KIKLQGVSTHIEQLFSL 84 ++ HG + +Q + I++LF + Sbjct: 73 LKARHGMESRFAVQEIPPQIQKLFDM 98 >gi|59714203|ref|YP_206978.1| putative sulphate transporter, anti-sigma factor antagonist [Vibrio fischeri ES114] gi|59482451|gb|AAW88090.1| putative sulphate transporter, anti-sigma factor antagonist [Vibrio fischeri ES114] Length = 105 Score = 39.1 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 36/95 (37%), Gaps = 5/95 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S I V G+ + +I + I + + +DLS + +D+ G I+Y Sbjct: 8 SNEDILVLSVQGDMDAIGCRDIQPSIDSVIEQ--EHHQVQIDLSHVAFLDSSGIGAIVYL 65 Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKI 93 ++ ++++ +L L+ + + Sbjct: 66 YKRLIEKDRTMQIKNAHGQPLELLKLLRIENAIPV 100 >gi|145595097|ref|YP_001159394.1| Sulfate transporter/antisigma-factor antagonist STAS [Salinispora tropica CNB-440] gi|145304434|gb|ABP55016.1| Sulfate transporter/antisigma-factor antagonist STAS [Salinispora tropica CNB-440] Length = 176 Score = 38.7 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 19 EISEIADDVVMAINKSIQS-DSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 + D + A++++I+ +VDLSA+ +ID++G L++ ++ + Sbjct: 83 ATAATPDPLRTALDEAIEHEGRVVVDLSAVEQIDSVGLGLLVRARQEARQR 133 >gi|153871244|ref|ZP_02000467.1| anti-sigma-factor antagonist [Beggiatoa sp. PS] gi|152072289|gb|EDN69532.1| anti-sigma-factor antagonist [Beggiatoa sp. PS] Length = 111 Score = 38.7 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 25/63 (39%), Gaps = 7/63 (11%) Query: 10 RFAGNWKSPEISEIADD-------VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 R +G + E+ + + K IQ ++DLS +T D+ G ++ Sbjct: 15 RLSGELTFTTVGELLSEFTEKMSLLDNGGAKKIQPAPQVMDLSDVTRTDSAGLAFLIELQ 74 Query: 63 EKY 65 ++ Sbjct: 75 KQT 77 >gi|166367962|ref|YP_001660235.1| metal dependent phosphohydrolase HD region [Microcystis aeruginosa NIES-843] gi|166090335|dbj|BAG05043.1| metal dependent phosphohydrolase HD region [Microcystis aeruginosa NIES-843] Length = 782 Score = 38.7 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 34/257 (13%), Positives = 80/257 (31%), Gaps = 10/257 (3%) Query: 57 LIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116 L+ + + + + + Q ++ + G Sbjct: 285 LLAALEGEANLIEDREATKEQATKAVEAVDTVMSSAQTGQIIVKAGEKITQAQFVLIDGF 344 Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV--PVVIL- 173 + + + LV S G FC + + L R +G+ P++ + Sbjct: 345 GLSERGINWMGLGSTAILVTSAIGTFCLVAQRLHRPLRH--RDFILLGLLSFTTPILAIA 402 Query: 174 -ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 I F A + + A + + G ++A +IAG G + A I Sbjct: 403 NIPFTNLAAVGLLVSSFYGPTLAVTQVLLTAGLSLFSSQG--ISADLIAGTIGGLLAAMI 460 Query: 233 -GSMKINEEIDAIRT-MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 G ++ +E+ + +G+ + + + + ++ L + + G S + W Sbjct: 461 AGKLRSRDELSLLGMGIGVSQGGVYLLTYLIVSATASTIIYTLLPTALVYGLSGIAWTVI 520 Query: 291 DIPFAVFFSRFHSTATL 307 + + + R T Sbjct: 521 ALGLSPYLERCFDVVTP 537 >gi|167520576|ref|XP_001744627.1| hypothetical protein [Monosiga brevicollis MX1] gi|163776958|gb|EDQ90576.1| predicted protein [Monosiga brevicollis MX1] Length = 913 Score = 38.7 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 9/53 (16%), Positives = 19/53 (35%) Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + I A + ++ +T+ VV + +I+ D LF+ Sbjct: 859 SLTFTAIIMGCAEWRARRPSLQPRNVASAITSAVVSAGVAIIVADGLFSQIML 911 >gi|296133161|ref|YP_003640408.1| anti-sigma-factor antagonist [Thermincola sp. JR] gi|296031739|gb|ADG82507.1| anti-sigma-factor antagonist [Thermincola potens JR] Length = 111 Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62 + + + G++ I + +++ + + ++DLS + ID+ G +I+ + Sbjct: 11 VLLVKLTGDFDMAVADNIRCHIDKQLDEGL-VKNVVLDLSDVGFIDSSGLGVILGRYKRI 69 Query: 63 EKYHGKIKLQGVSTHIEQLFSL 84 + GK+ + G + ++ L Sbjct: 70 SQLGGKMAIIGAQPQVNRILEL 91 >gi|257094987|ref|YP_003168628.1| anti-sigma-factor antagonist [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047511|gb|ACV36699.1| anti-sigma-factor antagonist [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 101 Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 3/73 (4%) Query: 19 EISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY---HGKIKLQGVS 75 I + + +D +DLS + E+DT G +L+M + ++ + G S Sbjct: 16 TIYQAQAQKEQLLAALAAADHLELDLSGVAEMDTAGLQLLMLLKREVLQQGKRLTISGHS 75 Query: 76 THIEQLFSLISFT 88 ++Q+ + Sbjct: 76 PAVQQILDFCNLV 88 >gi|296130453|ref|YP_003637703.1| anti-sigma-factor antagonist [Cellulomonas flavigena DSM 20109] gi|296022268|gb|ADG75504.1| anti-sigma-factor antagonist [Cellulomonas flavigena DSM 20109] Length = 111 Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 32/87 (36%), Gaps = 5/87 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI-- 58 + + G V R G +++ V A++ +VDL+ + +D+ G + Sbjct: 7 LRDPGAAVLRVTGRLTMLGAAQLRTTVDRAVD--TGHPLVVVDLAEVPFMDSSGLGALVG 64 Query: 59 -MYFMEKYHGKIKLQGVSTHIEQLFSL 84 + G +++ + + L Sbjct: 65 GLRAARAASGDLRIAAPCEQVRTVLEL 91 >gi|328880418|emb|CCA53657.1| anti-sigma F factor antagonist (spoIIAA-2); anti sigma b factor antagonist RsbV [Streptomyces venezuelae ATCC 10712] Length = 122 Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 33/82 (40%), Gaps = 5/82 (6%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 V AG +AD + + + ++DLSA+ +D+ G +++ + + Sbjct: 19 TAVLSVAGELDMDTAGRLADHLAEQLGE--GRHHLVLDLSALGFMDSSGLNVLIRSVHRA 76 Query: 66 H---GKIKLQGVSTHIEQLFSL 84 G + L + + ++ + Sbjct: 77 REAGGDLYLAAPNPAVRRILEI 98 >gi|148270482|ref|YP_001244942.1| anti-sigma-factor antagonist [Thermotoga petrophila RKU-1] gi|147736026|gb|ABQ47366.1| anti-sigma-factor antagonist [Thermotoga petrophila RKU-1] Length = 110 Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 41/89 (46%), Gaps = 1/89 (1%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + ++ + R G + SE+ + + I+ + + ++DLS+++ +D+ G ++ Sbjct: 9 VEQDDKAIVRVQGEIDAYNSSELKEQLRSFISTTSK-KKIVLDLSSVSYMDSAGLGTLVV 67 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 ++ K +S+ E + + TH Sbjct: 68 ILKDAKINGKEFILSSLKESILRIFKLTH 96 >gi|315179035|gb|ADT85949.1| anti-sigma B factor antagonist, hypothetical [Vibrio furnissii NCTC 11218] Length = 109 Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 6/84 (7%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G + +G + E+ + Q+ + L ++T ID+ G ++++ +E Sbjct: 9 QGPALAALSGPLDRDTVPELWAVLQQW---QPQNAECELSLKSVTRIDSAGMVMLIHLLE 65 Query: 64 ---KYHGKIKLQGVSTHIEQLFSL 84 K + I L V + LF L Sbjct: 66 HAKKQNCHIMLSFVPEQLRTLFQL 89 >gi|117924252|ref|YP_864869.1| anti-anti-sigma regulatory factor [Magnetococcus sp. MC-1] gi|117608008|gb|ABK43463.1| anti-anti-sigma regulatory factor [Magnetococcus sp. MC-1] Length = 104 Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 39/90 (43%), Gaps = 9/90 (10%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSA-IVDLSAITEIDTIGAELIMY 60 + TV R G + ++ E+ + I S Q + + I+DL+ +D+ G +I+ Sbjct: 13 QNDSETVIRVRGRFNVQQLFEVNN-----IRPSDQPNHSYIIDLTETEFLDSSGMGIILR 67 Query: 61 FMEKYHGKIK---LQGVSTHIEQLFSLISF 87 E+ G + ++ I +L + F Sbjct: 68 LREQVSGTKENMVIRNARPGIRRLLETVQF 97 >gi|297197210|ref|ZP_06914607.1| anti-sigma factor antagonist [Streptomyces sviceus ATCC 29083] gi|197717540|gb|EDY61574.1| anti-sigma factor antagonist [Streptomyces sviceus ATCC 29083] Length = 112 Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 10/87 (11%), Positives = 33/87 (37%), Gaps = 5/87 (5%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---M 62 V +G ++E+ + + ++ + ++D+S + D+ G ++ Sbjct: 14 GPVLELSGELDYANVAELHEVLDGRALRAGRC--LVLDMSGLEFCDSSGITALIAARSNA 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTH 89 + + L V +I ++ ++ Sbjct: 72 QAVQADVALAAVPPNILRVLRIVGLDQ 98 >gi|46579860|ref|YP_010668.1| anti-anti-sigma factor [Desulfovibrio vulgaris str. Hildenborough] gi|120602674|ref|YP_967074.1| anti-sigma-factor antagonist [Desulfovibrio vulgaris DP4] gi|46449276|gb|AAS95927.1| anti-anti-sigma factor, putative [Desulfovibrio vulgaris str. Hildenborough] gi|120562903|gb|ABM28647.1| anti-sigma-factor antagonist [Desulfovibrio vulgaris DP4] gi|311234139|gb|ADP86993.1| anti-sigma-factor antagonist [Desulfovibrio vulgaris RCH1] Length = 114 Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 34/89 (38%), Gaps = 4/89 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + V +G + ++ A++ +D A +DL+ +T +D+ G ++ Sbjct: 9 HGNVIVAVLSGELTLANAQHLRGELEEALSTQGVTDVA-LDLAGVTYLDSSGLGSLIAVS 67 Query: 63 EKYHG---KIKLQGVSTHIEQLFSLISFT 88 + +I L S + +L + Sbjct: 68 TRARASGCRILLYRPSKEVHKLLDAAQLS 96 >gi|308177914|ref|YP_003917320.1| hypothetical protein AARI_21290 [Arthrobacter arilaitensis Re117] gi|307745377|emb|CBT76349.1| UPF0182 protein [Arthrobacter arilaitensis Re117] Length = 1011 Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 46/124 (37%), Gaps = 21/124 (16%) Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY--------DIPFAVFFSR 300 L+ VR L++ +P++ + A+ G I ++ D F + Sbjct: 121 LEPVRRF-------LMVGIPVVIGIFAAVAVAGQWQTILLFFNQVGFGSTDPQFNMDLGF 173 Query: 301 FHSTATLANIFTGLIKAPFM-ACAIGIVA--MKEGFAVG-VHSNSLGKKVT--TCVVQSI 354 F + + G + + + G++ + G V ++GK T VV ++ Sbjct: 174 FVFSLPFIGLVNGFLISVVLLGGVAGLLTHYLYGGIRVEERGGITVGKAARVHTAVVVAV 233 Query: 355 SIVI 358 +++ Sbjct: 234 FLIL 237 >gi|240127332|ref|ZP_04739993.1| hypothetical protein NgonS_01550 [Neisseria gonorrhoeae SK-93-1035] gi|268685701|ref|ZP_06152563.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] gi|268625985|gb|EEZ58385.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] Length = 92 Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 26/80 (32%), Gaps = 4/80 (5%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFMEKYH 66 G+ ++ D + + I VD + D+ L++ + Sbjct: 9 TLHIGGDITVKTLT---GDAFGRFRQQCRLKETIAVDFGGVKRADSACVSLLLEVLRGCK 65 Query: 67 GKIKLQGVSTHIEQLFSLIS 86 G ++L G+ + L L Sbjct: 66 GSVRLTGIPESVRALSELYE 85 >gi|325922505|ref|ZP_08184268.1| putative NTP binding protein (contains STAS domain) [Xanthomonas gardneri ATCC 19865] gi|325924181|ref|ZP_08185741.1| putative NTP binding protein (contains STAS domain) [Xanthomonas gardneri ATCC 19865] gi|325545312|gb|EGD16606.1| putative NTP binding protein (contains STAS domain) [Xanthomonas gardneri ATCC 19865] gi|325547013|gb|EGD18104.1| putative NTP binding protein (contains STAS domain) [Xanthomonas gardneri ATCC 19865] Length = 97 Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 9/84 (10%), Positives = 30/84 (35%), Gaps = 7/84 (8%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66 G ++ + ++ +DLS + +D+ G ++ + Sbjct: 13 TLALTGVLDRAAVTAAWPQAIAQLD-----GVRTLDLSGVQRLDSAGVAMLAELAARVRS 67 Query: 67 -GKIKLQGVSTHIEQLFSLISFTH 89 G + + G ++ +++L + + Sbjct: 68 TGTVTVVGEASGLDELRAAYRLSP 91 >gi|320104165|ref|YP_004179756.1| anti-sigma-factor antagonist [Isosphaera pallida ATCC 43644] gi|319751447|gb|ADV63207.1| anti-sigma-factor antagonist [Isosphaera pallida ATCC 43644] Length = 111 Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 37/70 (52%), Gaps = 4/70 (5%) Query: 21 SEIADDVVMAINKSIQSDS-AIVDLSAITEIDTIGAELIMYFMEKYH---GKIKLQGVST 76 + + + ++N ++S S + D+S I +D+ G +++ + + + G ++L G+S Sbjct: 23 ASNSKEFRASVNPILESHSHVVFDMSKIAFVDSSGCGVLLSCLRELNSRGGDLRLCGLSP 82 Query: 77 HIEQLFSLIS 86 + LF L+ Sbjct: 83 QVRSLFELVR 92 >gi|290476803|ref|YP_003469714.1| hypothetical protein XBJ1_3834 [Xenorhabdus bovienii SS-2004] gi|289176147|emb|CBJ82952.1| conserved hypothetical protein [Xenorhabdus bovienii SS-2004] Length = 111 Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 34/85 (40%), Gaps = 8/85 (9%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61 E + G + + S+ ++ +D+S + +D+ G L ++ Sbjct: 18 EQTGSTLFLHGTLDRDSLLPLWQQ-----KGSVMAEIENIDVSRLEHVDSTGLALFVHLK 72 Query: 62 --MEKYHGKIKLQGVSTHIEQLFSL 84 M++ ++ G+S +E L +L Sbjct: 73 GDMQQRGKRLTFSGISERLETLIAL 97 >gi|320010157|gb|ADW05007.1| anti-anti-sigma factor [Streptomyces flavogriseus ATCC 33331] Length = 129 Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 7/55 (12%), Positives = 19/55 (34%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 G R G+ ++ + + + ++D S + D+ G ++ Sbjct: 18 GAVRLRLVGDLDYDTSEQLVERAQACLAADPAPQTLVLDCSGLHMCDSSGVSALL 72 >gi|315646366|ref|ZP_07899484.1| anti-sigma-factor antagonist [Paenibacillus vortex V453] gi|315278009|gb|EFU41329.1| anti-sigma-factor antagonist [Paenibacillus vortex V453] Length = 117 Score = 38.7 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62 I + R +G + + AI + Q++ ++ L + +D+ G +I+ F+ Sbjct: 13 ILIVRLSGELDHHTADHVRMQLEEAIQRR-QTEHLVLSLKELDFMDSSGLGVILGRYKFI 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSL 84 ++ GK+ + V + +L + Sbjct: 72 KQKGGKMAVCDVKPQVYRLLEM 93 >gi|271965897|ref|YP_003340093.1| anti-anti-sigma regulatory factor [Streptosporangium roseum DSM 43021] gi|270509072|gb|ACZ87350.1| anti-anti-sigma regulatory factor [Streptosporangium roseum DSM 43021] Length = 109 Score = 38.7 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 10/98 (10%), Positives = 35/98 (35%), Gaps = 5/98 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + G G+ +E+ + ++ +DLS + +D+ G ++ Sbjct: 14 TAEGTVRLVLTGDLDYDTAAELFTLAQELFSADLR--LLELDLSGLDFVDSSGVAALINV 71 Query: 62 MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQ 96 + +++ ++ ++ LF + + ++ Sbjct: 72 YNTARARNSAMRIIALTPYLRHLFKVTALDQVFELPPA 109 >gi|113461312|ref|YP_719381.1| hypothetical protein HS_1169 [Haemophilus somnus 129PT] gi|112823355|gb|ABI25444.1| conserved hypothetical protein [Haemophilus somnus 129PT] Length = 110 Score = 38.7 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 30/86 (34%), Gaps = 4/86 (4%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKS-IQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 R G + ++ + + + +LS + ID+ G L+ F+ + Sbjct: 18 TLRIMGALSRDTLLPFLQQRDELLSSAELVGQQLVWELSEVNRIDSAGFALLGDFINELE 77 Query: 67 GKI---KLQGVSTHIEQLFSLISFTH 89 ++ K+ +E L L + Sbjct: 78 KQVSSQKIHNAPIQLEILADLFGLSD 103 >gi|303248528|ref|ZP_07334785.1| anti-sigma-factor antagonist [Desulfovibrio fructosovorans JJ] gi|302490058|gb|EFL49979.1| anti-sigma-factor antagonist [Desulfovibrio fructosovorans JJ] Length = 107 Score = 38.7 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 36/98 (36%), Gaps = 4/98 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59 + V R +G + + ++ + I+ + Q + ++ + +D+ G L++ Sbjct: 8 ETDQALVIRLSGEIVMDLAANLKAELTLLIDAT-QKPEVVCNMRRVDFMDSSGVGLLIGI 66 Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96 + + S I +L S++ T I Sbjct: 67 RRLCQDKGKAFSVADPSPAIRKLISVLRLTEFFAIAPA 104 >gi|257792664|ref|YP_003183270.1| anti-sigma-factor antagonist [Eggerthella lenta DSM 2243] gi|257476561|gb|ACV56881.1| anti-sigma-factor antagonist [Eggerthella lenta DSM 2243] Length = 101 Score = 38.7 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 9/94 (9%), Positives = 39/94 (41%), Gaps = 6/94 (6%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G V + G+ + +++ + + ++ + ++D + + + + G +++ + Sbjct: 11 GGEAVLKLGGHLNTNTAADLEEALEPVFERT---NKVVLDFADLEYLSSAGLRVLVATQK 67 Query: 64 K---YHGKIKLQGVSTHIEQLFSLISFTHRKKIK 94 + G +++ S I ++F + ++ Sbjct: 68 RVTAAEGALRIVNASDDIREVFDITGLIDVFDVE 101 >gi|261250146|ref|ZP_05942722.1| hypothetical protein VIA_000166 [Vibrio orientalis CIP 102891] gi|260939262|gb|EEX95248.1| hypothetical protein VIA_000166 [Vibrio orientalis CIP 102891] Length = 109 Score = 38.7 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 6/84 (7%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 NG F +G+ + ++ + + V L + +ID+ G ++++ +E Sbjct: 9 NGAAEFALSGDLNRESVPKLWSSLKQ---QQWPGSEVEVSLQQLKKIDSAGMVMLIHLIE 65 Query: 64 ---KYHGKIKLQGVSTHIEQLFSL 84 K + I L V + LF L Sbjct: 66 HAKKQNCHIMLSFVPDELRTLFQL 89 >gi|240079834|ref|ZP_04724377.1| hypothetical protein NgonF_00756 [Neisseria gonorrhoeae FA19] gi|268595979|ref|ZP_06130146.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268549767|gb|EEZ44786.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] Length = 92 Score = 38.7 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 26/79 (32%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 G+ ++ D + ++ VD + D+ L++ + G Sbjct: 9 TLHIGGDITVKTLTG--DAFGRFRQQCCLKETIAVDFGGVKRADSACVSLLLEVLRGCKG 66 Query: 68 KIKLQGVSTHIEQLFSLIS 86 ++L G+ + L L Sbjct: 67 SVRLTGIPESVRALSELYE 85 >gi|71274640|ref|ZP_00650928.1| Sulfate transporter/antisigma-factor antagonist STAS [Xylella fastidiosa Dixon] gi|71899648|ref|ZP_00681802.1| Sulfate transporter/antisigma-factor antagonist STAS [Xylella fastidiosa Ann-1] gi|170730906|ref|YP_001776339.1| hypothetical protein Xfasm12_1820 [Xylella fastidiosa M12] gi|71164372|gb|EAO14086.1| Sulfate transporter/antisigma-factor antagonist STAS [Xylella fastidiosa Dixon] gi|71730600|gb|EAO32677.1| Sulfate transporter/antisigma-factor antagonist STAS [Xylella fastidiosa Ann-1] gi|167965699|gb|ACA12709.1| conserved hypothetical protein [Xylella fastidiosa M12] Length = 101 Score = 38.7 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 9/61 (14%), Positives = 26/61 (42%), Gaps = 3/61 (4%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 +G + ++ + +S + +DL+ + ++D+ G L+ ME+ + Sbjct: 14 LVLSGPLNRDAAIRLWSEIQV---QSKSNGVCQLDLTGVEQLDSAGVALLAEVMERIRVQ 70 Query: 69 I 69 + Sbjct: 71 V 71 >gi|269796790|ref|YP_003316245.1| STAS domain-containing protein [Sanguibacter keddieii DSM 10542] gi|269098975|gb|ACZ23411.1| STAS domain-containing protein [Sanguibacter keddieii DSM 10542] Length = 123 Score = 38.7 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 21 SEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIE 79 ++++ D+ A ++ + VD+ +T +D+ G + G+++L ++ Sbjct: 30 ADLSADLQQATEDVREAGLPVDVDVHHVTFMDSSGVAFLARLTSVTPGRVRLHNTPPTVK 89 Query: 80 QLFSL 84 L + Sbjct: 90 FLLEV 94 >gi|271961671|ref|YP_003335867.1| anti-anti-sigma factor family protein [Streptosporangium roseum DSM 43021] gi|270504846|gb|ACZ83124.1| anti-anti-sigma factor family protein [Streptosporangium roseum DSM 43021] Length = 123 Score = 38.7 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 5/88 (5%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 +++ AG + D+ +I S I+DL +T D+ G ++ + + Sbjct: 18 VSLLALAGELDYTNAERLQHDLQESIGPD--SRDLIIDLKDLTFCDSTGIQVFLAVRKLV 75 Query: 66 HGK---IKLQGVSTHIEQLFSLISFTHR 90 HG+ + L + +E+LF L T Sbjct: 76 HGRGHSVVLAQLHPRLERLFHLTGLTQA 103 >gi|241759036|ref|ZP_04757148.1| conserved hypothetical protein [Neisseria flavescens SK114] gi|241320857|gb|EER57090.1| conserved hypothetical protein [Neisseria flavescens SK114] Length = 92 Score = 38.7 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 +G+ ++ A + ++D +D S + + D+ L++ + + Sbjct: 9 TLYISGDVTVKTLTASAFARYEQQCRLKETD--RIDFSQVGKADSACVSLLLNALRRTDK 66 Query: 68 KIKLQGVSTHIEQLFSLIS 86 K +Q + + L L Sbjct: 67 KPTIQNIPDSVRALAELYE 85 >gi|307261765|ref|ZP_07543431.1| hypothetical protein appser12_13240 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306868583|gb|EFN00394.1| hypothetical protein appser12_13240 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 117 Score = 38.7 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 28/90 (31%), Gaps = 3/90 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 N + +G + + ++ + DL + +D+ G L+ Sbjct: 13 QNNESLFVKLSGELTRDMLLPLWKQRASFLSPK-GNQHIYWDLKDLERVDSAGFTLLAEL 71 Query: 62 MEKYHGKIK--LQGVSTHIEQLFSLISFTH 89 + Y + L V ++ L L T Sbjct: 72 LNYYQKQTPNCLIHVPEVVKTLADLFDLTD 101 >gi|254381467|ref|ZP_04996831.1| hypothetical protein SSAG_01133 [Streptomyces sp. Mg1] gi|194340376|gb|EDX21342.1| hypothetical protein SSAG_01133 [Streptomyces sp. Mg1] Length = 110 Score = 38.7 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 6/83 (7%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G V G + + + +Q + +VDLSA+T +D+ +++ + Sbjct: 13 GRFVVFVTGELDINTCPRVTETTD---SLPLQGQTLLVDLSAVTFMDSAALNMLLRLRHR 69 Query: 65 YH---GKIKLQGVSTHIEQLFSL 84 H G +KL G S Q+ + Sbjct: 70 AHAEGGTLKLCGASDQTLQVLDV 92 >gi|198282481|ref|YP_002218802.1| hypothetical protein Lferr_0341 [Acidithiobacillus ferrooxidans ATCC 53993] gi|198247002|gb|ACH82595.1| hypothetical protein Lferr_0341 [Acidithiobacillus ferrooxidans ATCC 53993] Length = 105 Score = 38.7 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 38/93 (40%), Gaps = 6/93 (6%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G G+W+ ++++ + D + ++ + D+ +++ + + Sbjct: 13 DGAGWLFLRGDWR---VAQLDKALQFFSWAKDGRDCTEISVAELDAADSATLAVLLEWTQ 69 Query: 64 KYHGK---IKLQGVSTHIEQLFSLISFTHRKKI 93 + G+ +++ G S + +L SL S + Sbjct: 70 QAAGRGVPLRIHGASPKLRELASLYSLQDILPL 102 >gi|297204118|ref|ZP_06921515.1| anti-sigma factor antagonist [Streptomyces sviceus ATCC 29083] gi|197714783|gb|EDY58817.1| anti-sigma factor antagonist [Streptomyces sviceus ATCC 29083] Length = 124 Score = 38.7 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 39/92 (42%), Gaps = 12/92 (13%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAI-----NKSIQSDSAIVDLSAITEIDTIGAE 56 + +GI V G+ ++ D + A+ Q+ + DLS +T +D+ G Sbjct: 19 TADGIRVVTLRGD----IDHDVKDALTTALLPPDGADDGQAPRVVADLSGVTFLDSTGIN 74 Query: 57 LIMYFMEK---YHGKIKLQGVSTHIEQLFSLI 85 + + ++ G ++L + ++F L+ Sbjct: 75 VFVQVHQQVSTAQGWLRLAAARESVTRVFELV 106 >gi|28868134|ref|NP_790753.1| STAS domain-containing protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28851371|gb|AAO54448.1| STAS domain protein [Pseudomonas syringae pv. tomato str. DC3000] gi|331018816|gb|EGH98872.1| STAS domain protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 96 Score = 38.7 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 6/86 (6%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---M 59 + I + G ++E+A ++ I + + VDLS +TE+D G +L+ Sbjct: 8 RDDIAHMQIDGELTIYTVTELAARLLPQIAGAAR---VEVDLSRVTEMDGAGLQLLAVIQ 64 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLI 85 K + L G S + + F L Sbjct: 65 REAGKTGTALHLTGQSQAVTETFELC 90 >gi|121998895|ref|YP_001003682.1| anti-sigma-factor antagonist [Halorhodospira halophila SL1] gi|121590300|gb|ABM62880.1| anti-sigma-factor antagonist [Halorhodospira halophila SL1] Length = 104 Score = 38.7 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 9/92 (9%), Positives = 32/92 (34%), Gaps = 2/92 (2%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 R G + + + + + +DL+ + D+ G L++ + + Sbjct: 15 RVTGRLELDTVGALWPQGTALF--TAEGGVCEIDLAGVERTDSAGVALLIDWTRQARAHG 72 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 + +QL +++ + + + + + Sbjct: 73 GRLCLCHVPQQLLAIVHASGAEGVLEIADEPA 104 >gi|300718602|ref|YP_003743405.1| Anti-sigma B factor antagonist [Erwinia billingiae Eb661] gi|299064438|emb|CAX61558.1| Anti-sigma B factor antagonist [Erwinia billingiae Eb661] Length = 98 Score = 38.7 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 9/79 (11%), Positives = 31/79 (39%), Gaps = 8/79 (10%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---KY 65 +G + + + +++ +D+S + +D+ G L+++ + + Sbjct: 14 LHLSGELQRETLLALWKQ-----RETVMKQIDTIDVSELDRVDSAGLALLVHLRQIALQQ 68 Query: 66 HGKIKLQGVSTHIEQLFSL 84 + G++ + L +L Sbjct: 69 GKAPQFTGINDKLHSLITL 87 >gi|78222299|ref|YP_384046.1| hypothetical protein Gmet_1081 [Geobacter metallireducens GS-15] gi|78193554|gb|ABB31321.1| hypothetical protein Gmet_1081 [Geobacter metallireducens GS-15] Length = 111 Score = 38.7 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 12/86 (13%), Positives = 33/86 (38%), Gaps = 8/86 (9%) Query: 5 GITVFRFAGNWK----SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 G R G+W + ++ + + + Q ++D++ + D G +L+ Sbjct: 7 GTLTIRLTGDWSMTGVTQQLLPLTEHLAALSGVHPQQVQPVIDMAEVALFDACGCQLLTI 66 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLIS 86 + ++L G S + + + + Sbjct: 67 LLR----HLRLLGFSPVLANIPAELR 88 >gi|258514280|ref|YP_003190502.1| Na/Pi-cotransporter II-related protein [Desulfotomaculum acetoxidans DSM 771] gi|257777985|gb|ACV61879.1| Na/Pi-cotransporter II-related protein [Desulfotomaculum acetoxidans DSM 771] Length = 566 Score = 38.3 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 77/222 (34%), Gaps = 14/222 (6%) Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 L ++ + + + + + + G ++ A + ++ + + Sbjct: 23 LSESLQTIAGLRLKIILSTLTKNRFVGMLLGVVITVLFQSSTATSVILVGLTSASIITLN 82 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 L+ ++ +G G+ I A++ + KI E A+ +G+ + I + R+ L I Sbjct: 83 QTLSVLLGSG-IGTTITAQLIAFKITE--VALPMVGIGAMIIFFTKRVKHRQYG---LAI 136 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 L +G I+ Y + FF LI A A + A G Sbjct: 137 LGFGLTFLGLKIMSDTMYPLRDDPFFQHLMVGLENKPFLAMLI-ASLFAFLVHSSAATIG 195 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIID--SLFAIFYFAIG 372 + + L T + +I ++ + + F ++G Sbjct: 196 IIMLLAMQGL-----TSLESAIFLLFGANIGTCFTAILSSLG 232 >gi|218437394|ref|YP_002375723.1| anti-sigma-factor antagonist [Cyanothece sp. PCC 7424] gi|218170122|gb|ACK68855.1| anti-sigma-factor antagonist [Cyanothece sp. PCC 7424] Length = 118 Score = 38.3 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 12/115 (10%), Positives = 42/115 (36%), Gaps = 4/115 (3%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI-- 58 + + I G + I++ + + + ++ +S +VD++ + +D+ G + Sbjct: 5 LETDTIVTLEPTGYLTAANITQFQEQLTLNVSDPEKS-IFLVDMTQVEFLDSAGLMALAS 63 Query: 59 -MYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHY 112 + + + + ++ +F L I + + N +++ Sbjct: 64 ACRLAQSLDKQFSICSIPPSVKIIFELTQLDRFLDIYDNRETFEATLNQTQDIAA 118 >gi|34497966|ref|NP_902181.1| hypothetical protein CV_2511 [Chromobacterium violaceum ATCC 12472] gi|34103821|gb|AAQ60182.1| hypothetical protein CV_2511 [Chromobacterium violaceum ATCC 12472] Length = 106 Score = 38.3 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 36/85 (42%), Gaps = 5/85 (5%) Query: 1 MSENGITVFR-FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 + ++G T G ++ D+++ +N + +DLS +TE+D GA+L+ Sbjct: 5 LRQDGETTLAALDGELTIFTAEDMQDELLGLLN----HERVALDLSGLTELDGCGAQLLC 60 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSL 84 + + K ++ L + Sbjct: 61 ILLAEAARLEKTMAIAAGNPLLDEV 85 >gi|115376640|ref|ZP_01463870.1| sulfate permease [Stigmatella aurantiaca DW4/3-1] gi|310819450|ref|YP_003951808.1| carbonate dehydratase [Stigmatella aurantiaca DW4/3-1] gi|115366383|gb|EAU65388.1| sulfate permease [Stigmatella aurantiaca DW4/3-1] gi|309392522|gb|ADO69981.1| Carbonate dehydratase [Stigmatella aurantiaca DW4/3-1] Length = 773 Score = 38.3 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 38/85 (44%), Gaps = 4/85 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 G +G S++ D + K +S ++D+SA+T +D+ GA++++ Sbjct: 437 ETPGAYRVVLSGPLTFMSSSKL-DTLRTQSAKLDRSRGVVIDMSAVTAVDSSGADMLIGL 495 Query: 62 MEKY---HGKIKLQGVSTHIEQLFS 83 + K+ LQG+ ++ + Sbjct: 496 VNDLLNADLKVVLQGLQPEFQRALT 520 >gi|197337497|ref|YP_002158686.1| anti-anti-sigma regulatory factor [Vibrio fischeri MJ11] gi|197314749|gb|ACH64198.1| anti-anti-sigma regulatory factor [Vibrio fischeri MJ11] Length = 105 Score = 38.3 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 36/95 (37%), Gaps = 5/95 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S I V G+ + +I + I + + +DLS + +D+ G I+Y Sbjct: 8 SNADILVLSVQGDMDAIGCRDIQPSIDSVIEQ--EHHQVQIDLSHVAFLDSSGIGAIVYL 65 Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKI 93 ++ ++++ +L L+ + + Sbjct: 66 YKRLIEKDRTMQIKNAHGQPLELLKLLRIENAIPV 100 >gi|117619997|ref|YP_858372.1| anti-anti-sigma factor family protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561404|gb|ABK38352.1| anti-anti-sigma factor family protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 139 Score = 38.3 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 35/83 (42%), Gaps = 9/83 (10%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G R +G ++ ++ E+ ++ ++L +T +D+ G L++ + + Sbjct: 46 GTQEMRLSGELQAAQVVELWQR------RADWWQEDQIELGDVTTLDSAGLALLVKWAKA 99 Query: 65 YHGK---IKLQGVSTHIEQLFSL 84 + +L G ST L +L Sbjct: 100 ALARGATPQLVGASTDFYTLANL 122 >gi|297199462|ref|ZP_06916859.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] gi|197712996|gb|EDY57030.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] Length = 233 Score = 38.3 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 37/109 (33%), Gaps = 8/109 (7%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQ-SDSAIVDLSAITEIDTIGAELIMYF 61 + G V G I AD + + + + +D +D++ +T +DT G + + Sbjct: 33 DGGRAVLVARGEL----IHGCADALGRTLARLPEDTDRVDLDMTGVTFMDTTGLQFLEVL 88 Query: 62 ---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF 107 + ++ G + ++ + + + +S Sbjct: 89 DTYGRRRRVRVTATGWAEQPRRVLEMAGLDPDDPLHGPGTRWEPVPSSM 137 >gi|217077881|ref|YP_002335599.1| anti-sigma factor antagonist [Thermosipho africanus TCF52B] gi|217037736|gb|ACJ76258.1| anti-sigma factor antagonist [Thermosipho africanus TCF52B] Length = 110 Score = 38.3 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 34/79 (43%), Gaps = 2/79 (2%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG-AELIM 59 + ++ T+ + G+ + +++ D+ + + + ++DLS + ID+ G L+ Sbjct: 9 IEKDQYTIAKVTGDIDAYHSADVKKDIREKMLATEKGK-FVIDLSEVNYIDSAGLGSLVA 67 Query: 60 YFMEKYHGKIKLQGVSTHI 78 + +L +S Sbjct: 68 ILKDARLNNKELALLSPKQ 86 >gi|218550474|ref|YP_002384265.1| hypothetical protein EFER_3168 [Escherichia fergusonii ATCC 35469] gi|218358015|emb|CAQ90661.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469] gi|324115205|gb|EGC09169.1| hypothetical protein ERIG_00081 [Escherichia fergusonii B253] gi|325498772|gb|EGC96631.1| hypothetical protein ECD227_2869 [Escherichia fergusonii ECD227] Length = 97 Score = 38.3 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 33/80 (41%), Gaps = 8/80 (10%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EK 64 AG ++ + ++ + +DLS I +DT G L+++ + ++ Sbjct: 13 TLALAGELDQDVLNPLWEE-----RNEVMQGVTCIDLSKIARVDTGGLALLIHLIDIAKR 67 Query: 65 YHGKIKLQGVSTHIEQLFSL 84 + L+GV+ + L L Sbjct: 68 QGNSVTLRGVNEKVYTLAKL 87 >gi|296268033|ref|YP_003650665.1| anti-sigma-factor antagonist [Thermobispora bispora DSM 43833] gi|296090820|gb|ADG86772.1| anti-sigma-factor antagonist [Thermobispora bispora DSM 43833] Length = 116 Score = 38.3 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 12/101 (11%), Positives = 39/101 (38%), Gaps = 5/101 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S G + +G ++ + I+ S Q ++D+S + D+ G +++ Sbjct: 9 SSGGTAIVAVSGEIDLYTAPQLQAEFARLISTSPQR--VVIDMSEVEFCDSTGVNVLLSA 66 Query: 62 MEKYH---GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 +++ G +++ + + ++ + + + P Sbjct: 67 LKRLRERGGDLEVAAPRSAVRKILQVTGLDSVFTVHDAVPD 107 >gi|198450604|ref|XP_001358061.2| GA10579 [Drosophila pseudoobscura pseudoobscura] gi|198131106|gb|EAL27198.2| GA10579 [Drosophila pseudoobscura pseudoobscura] Length = 815 Score = 38.3 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 43/145 (29%), Gaps = 14/145 (9%) Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q LS + L + T+++ A + + SM+ E+ D Sbjct: 187 QQVVSLSGLAIAEATSS-TYYANLLNMSPATTSLIAAVAATKSYND--SSMRW-EQFDGN 242 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP-FAVFFSRFHS 303 G D + A+ I + I+ +IG S VI P + F Sbjct: 243 VDFGFDPLYRHS----LAMSIVYCVAYIVVFLVGLIGNSFVIAVVLRAPRMRTVTNYFIV 298 Query: 304 TATLANIFTGLIKAPFMACAIGIVA 328 +A+I ++ Sbjct: 299 NLAIADILV-----IVFCLPATLIG 318 >gi|302037684|ref|YP_003798006.1| putative anti-sigma factor antagonist [Candidatus Nitrospira defluvii] gi|300605748|emb|CBK42081.1| putative Anti-sigma factor antagonist [Candidatus Nitrospira defluvii] Length = 112 Score = 38.3 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 31/87 (35%), Gaps = 5/87 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--- 58 + N R GN+ + + + ++ ++DLS + +D+ L+ Sbjct: 7 TSNKKATLRLEGNFTYTQRKAFQEMLKTVCTDQVE--EVVIDLSQVAFLDSAALGLLMIS 64 Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLI 85 +E K+ L + Q+ L Sbjct: 65 HRQLEAERRKLSLAYPQPTVRQIIELA 91 >gi|260770989|ref|ZP_05879918.1| predicted NTP binding protein (contains STAS domain) [Vibrio furnissii CIP 102972] gi|260614226|gb|EEX39416.1| predicted NTP binding protein (contains STAS domain) [Vibrio furnissii CIP 102972] Length = 109 Score = 38.3 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 6/84 (7%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G + +G + E+ + Q+ + L ++T ID+ G ++++ +E Sbjct: 9 QGPALAALSGPLDRDTVPELWAVLQQW---HPQNAECELSLKSVTRIDSAGMVMLIHLLE 65 Query: 64 ---KYHGKIKLQGVSTHIEQLFSL 84 K + I L V + LF L Sbjct: 66 HAKKQNCHIMLSFVPEQLRTLFQL 89 >gi|311900800|dbj|BAJ33208.1| putative antagonist protein [Kitasatospora setae KM-6054] Length = 130 Score = 38.3 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 37/99 (37%), Gaps = 5/99 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G V R AG+ ++ + + + +VDL+ + D+ G +++ Sbjct: 28 DGTVVCRIAGDLDIESLAPARKALAEVLR--GGNRLVVVDLAQVAFCDSSGLNMLLTARA 85 Query: 64 KYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 ++L VS +E+L + ++ P Sbjct: 86 DALAAGAVLRLAAVSHPVERLLEITGAAAVFDVRPTVPA 124 >gi|195166176|ref|XP_002023911.1| GL27160 [Drosophila persimilis] gi|194106071|gb|EDW28114.1| GL27160 [Drosophila persimilis] Length = 821 Score = 38.3 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 43/145 (29%), Gaps = 14/145 (9%) Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q LS + L + T+++ A + + SM+ E+ D Sbjct: 193 QQVVSLSGLAIAEATSS-TYYANLLNMSPATTSLIAAVAATKSYND--SSMRW-EQFDGN 248 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP-FAVFFSRFHS 303 G D + A+ I + I+ +IG S VI P + F Sbjct: 249 VDFGFDPLYRHS----LAMSIVYCVAYIVVFLVGLIGNSFVIAVVLRAPRMRTVTNYFIV 304 Query: 304 TATLANIFTGLIKAPFMACAIGIVA 328 +A+I ++ Sbjct: 305 NLAIADILV-----IVFCLPATLIG 324 >gi|283850920|ref|ZP_06368205.1| anti-sigma-factor antagonist [Desulfovibrio sp. FW1012B] gi|283573566|gb|EFC21541.1| anti-sigma-factor antagonist [Desulfovibrio sp. FW1012B] Length = 115 Score = 38.3 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 36/103 (34%), Gaps = 4/103 (3%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAEL---IMYFME 63 V +G + E+ ++ I + + + ++DLS + +D+ G L + E Sbjct: 13 LVIGLSGEIIMDVVIELKAEIAPLIQNASR-KAVVLDLSGVAFLDSSGVGLFIGLRRLCE 71 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106 + S I +LF ++ T + S Sbjct: 72 DEGKAFSIANPSPPIRKLFDMLRLTDYFAVSATPVTSPGATPS 114 >gi|284008695|emb|CBA75358.1| anti-sigma factor antagonist [Arsenophonus nasoniae] Length = 91 Score = 38.3 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 32/85 (37%), Gaps = 8/85 (9%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +NG T+ G + + ++++S ++ ID+ G + + Sbjct: 5 QQNGQTLI-LTGELDRDTLPAFWQQRQQLLK-----GINVINVSQLSHIDSTGLAMFVRL 58 Query: 62 M--EKYHGKIKLQGVSTHIEQLFSL 84 ++ K L+G+S + L L Sbjct: 59 KSEQQSGNKWVLEGISERFKTLIRL 83 >gi|114564527|ref|YP_752041.1| SpoIIAA family protein [Shewanella frigidimarina NCIMB 400] gi|114335820|gb|ABI73202.1| SpoIIAA family protein [Shewanella frigidimarina NCIMB 400] Length = 107 Score = 38.3 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 37/93 (39%), Gaps = 13/93 (13%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++ + +G E+ ++ S Q +VDLSA+ +D+ G L++ F Sbjct: 6 QQDQRCIV--SGRLTQDEVKQLWPKRHELFTASTQ----VVDLSALEYVDSAGVALLLAF 59 Query: 62 M-------EKYHGKIKLQGVSTHIEQLFSLISF 87 + ++ +L S ++++ L Sbjct: 60 IKLHASSSQETSVSRQLVNPSEQLKKMIELYDL 92 >gi|126651481|ref|ZP_01723685.1| anti-sigma factor antagonist [Bacillus sp. B14905] gi|126591734|gb|EAZ85830.1| anti-sigma factor antagonist [Bacillus sp. B14905] Length = 127 Score = 38.3 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 3/69 (4%) Query: 33 KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY---HGKIKLQGVSTHIEQLFSLISFTH 89 K + +DLS + +D+ G + + F ++ +GK+KL G+ST +++LF + + Sbjct: 55 KITEGLEIELDLSKVNYMDSTGLGIFVAFYKRTLRENGKVKLVGLSTRLQRLFEITGLSD 114 Query: 90 RKKIKNQKP 98 I+ K Sbjct: 115 LMDIETDKK 123 >gi|21243591|ref|NP_643173.1| hypothetical protein XAC2864 [Xanthomonas axonopodis pv. citri str. 306] gi|78048575|ref|YP_364750.1| putative anti-anti-sigma factor [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|294625044|ref|ZP_06703693.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294665333|ref|ZP_06730624.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325928059|ref|ZP_08189272.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Xanthomonas perforans 91-118] gi|21109162|gb|AAM37709.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] gi|78037005|emb|CAJ24725.1| putative anti-anti-sigma factor [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|292600674|gb|EFF44762.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292604882|gb|EFF48242.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325541557|gb|EGD13086.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Xanthomonas perforans 91-118] Length = 109 Score = 38.3 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 31/81 (38%), Gaps = 3/81 (3%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 G +E+ + A+ + +DL+A++EIDT G +L++ + Sbjct: 12 LTLALEGEMTIRRAAELKPLLQPAL---LHPGGLHLDLAAVSEIDTTGLQLLLATKQAIQ 68 Query: 67 GKIKLQGVSTHIEQLFSLISF 87 + ++ + +I Sbjct: 69 ADGRPFSLTDSSRAVVDVIEL 89 >gi|183220971|ref|YP_001838967.1| putative anti-sigma factor antagonist [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911066|ref|YP_001962621.1| anti-sigma factor antagonist [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775742|gb|ABZ94043.1| Anti-Sigma factor antagonist [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779393|gb|ABZ97691.1| Putative anti-sigma factor antagonist [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 123 Score = 38.3 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 36 QSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK---IKLQGVSTHIEQLFSLISFT 88 + +DL+ I ID+ G + +++ ++ H K ++L S + ++ L+ Sbjct: 41 KGKRTKLDLNGIERIDSAGIQFLIFIKKRSHSKHQVLELTNHSLPVLKVLDLLGLV 96 >gi|139438601|ref|ZP_01772117.1| Hypothetical protein COLAER_01115 [Collinsella aerofaciens ATCC 25986] gi|133776140|gb|EBA39960.1| Hypothetical protein COLAER_01115 [Collinsella aerofaciens ATCC 25986] Length = 464 Score = 38.3 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 23/165 (13%), Positives = 54/165 (32%), Gaps = 10/165 (6%) Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 ++ + ++ A Q + G + + +S L A+ G SG Sbjct: 57 QSTDIIQVALILSAIDTALQAFAPFRRIGGGLPIVMGVSFA-------FLPALQAMGASG 109 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 + A +G + + + + ++ L P + +I +++ + + Sbjct: 110 FSFGALLGGEIVGGAVAVLFGLAYSKIKWLFPPVVTGTVIFSIGVSLYPTAVKYMAGGMG 169 Query: 286 IWKYYDIPFA-VFFSRFHSTATLANIFTGLIK--APFMACAIGIV 327 + V F LAN G +K + F +G++ Sbjct: 170 TPLWGTPQAWCVALITFAVVFALANFGKGTLKLGSVFFGMIVGMI 214 >gi|325922307|ref|ZP_08184087.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Xanthomonas gardneri ATCC 19865] gi|325547212|gb|EGD18286.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Xanthomonas gardneri ATCC 19865] Length = 109 Score = 38.3 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 31/81 (38%), Gaps = 3/81 (3%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 G +E+ + A+ + +DL+A++EIDT G +L++ + Sbjct: 12 LTLALEGEMTIRRAAELKPLLQPAL---LHPGGLHLDLAAVSEIDTTGLQLLLATKQAIQ 68 Query: 67 GKIKLQGVSTHIEQLFSLISF 87 + ++ + +I Sbjct: 69 ADGRPFSLTDSSRAVVDVIEL 89 >gi|162450986|ref|YP_001613353.1| positive regulator of sigma-B [Sorangium cellulosum 'So ce 56'] gi|161161568|emb|CAN92873.1| positive regulator of sigma-B [Sorangium cellulosum 'So ce 56'] Length = 287 Score = 37.9 bits (87), Expect = 2.2, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 31/82 (37%), Gaps = 4/82 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + + V G ++A+ ++ I + IVDL+ ++ DT A + + Sbjct: 178 DEVLVLPLIGTLDERRSQQLAEALLDKIADK-GAQCCIVDLTGVSAFDTRAASALARIAQ 236 Query: 64 KYHG---KIKLQGVSTHIEQLF 82 ++ L G+ + Q Sbjct: 237 AVRLLGVEVVLTGIRPEVAQAL 258 >gi|290955149|ref|YP_003486331.1| anti-sigma-factor antagonist [Streptomyces scabiei 87.22] gi|260644675|emb|CBG67760.1| putative anti-sigma-factor antagonist [Streptomyces scabiei 87.22] Length = 122 Score = 37.9 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 9/80 (11%), Positives = 32/80 (40%) Query: 19 EISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHI 78 ++ ++ ++ ++ + +VDL +T +D+ G +++ + G+ ++ Sbjct: 35 DVKDLFEEALLTGGVAAPPPRIVVDLGGVTFMDSSGINVLVAAHRRVSGERGWLRIAAAQ 94 Query: 79 EQLFSLISFTHRKKIKNQKP 98 E + ++ P Sbjct: 95 ESVLRVLQLVGVDTFIPCHP 114 >gi|326438134|gb|EGD83704.1| hypothetical protein PTSG_11459 [Salpingoeca sp. ATCC 50818] Length = 316 Score = 37.9 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 GI V + G+ P + I D +V + + + IVD S ++ ID GA + + Sbjct: 179 GGIMVLQLGGSLMFPAVEHIKDMLVE-LRRESSCPAVIVDFSKVSFIDYTGAHGLQDVLR 237 Query: 64 KYHGK 68 + + Sbjct: 238 ELESE 242 >gi|258405515|ref|YP_003198257.1| anti-sigma-factor antagonist [Desulfohalobium retbaense DSM 5692] gi|257797742|gb|ACV68679.1| anti-sigma-factor antagonist [Desulfohalobium retbaense DSM 5692] Length = 114 Score = 37.9 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 NG+ ++G S++ + + A+ + ++DLS +D+ G ++ Sbjct: 8 QRNGVCQVTYSGELTLEVTSQLKERIEQALENE-HCQALVMDLSETVFLDSSGIGFLVSL 66 Query: 62 MEKYHGK 68 +K + Sbjct: 67 NKKMRQQ 73 >gi|220904524|ref|YP_002479836.1| anti-sigma-factor antagonist [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868823|gb|ACL49158.1| anti-sigma-factor antagonist [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 117 Score = 37.9 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 36/88 (40%), Gaps = 1/88 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S +TV R+ G+ P++ + + + + ++DLS + +DT G +++ Sbjct: 8 SHKNVTVLRYLGDMLLPDVPQFSRQLEAYLLAP-GIRQVVLDLSHVNRVDTSGLGVLVSA 66 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTH 89 K G + + T + L+ Sbjct: 67 STKSRGHGRRLVLLTPAPHVVELLKKVE 94 >gi|313905658|ref|ZP_07839019.1| hypothetical protein EubceDRAFT_1734 [Eubacterium cellulosolvens 6] gi|313469482|gb|EFR64823.1| hypothetical protein EubceDRAFT_1734 [Eubacterium cellulosolvens 6] Length = 676 Score = 37.9 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 25/198 (12%), Positives = 68/198 (34%), Gaps = 24/198 (12%) Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ---FG 194 + + ++ + + +L L +G+ +P+ +L+S + G L + FG Sbjct: 6 SLSKLVRNNCRRRAWLFFL---TMLIGIIILPIAVLVSVRVSTGVDVIGGSTLVKEAFFG 62 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 ++ + + I +L ++ S + M + + D ++ + ++ Sbjct: 63 WKVSPAQDAFLSTVTPINPILMMAILVDAFLSGVTG-FAYMNKSNQTDFYYSLPVKRSKL 121 Query: 255 L-----------ISPRIWALIISLPLLTILAN------FSAIIGASIVIWKYYDIPFAVF 297 + P + ++ +PL +L ++G I Y + AV Sbjct: 122 FLTGYLGGALTSVVPFVICELLCVPLALVLGVGSGKVFLVMLVGVCSAIVGYLAVYAAVI 181 Query: 298 FSRFHSTATLANIFTGLI 315 + + I ++ Sbjct: 182 LAMMLTGRVFTGILMAIV 199 >gi|148977762|ref|ZP_01814318.1| putative anti-sigma B factor antagonist [Vibrionales bacterium SWAT-3] gi|145962976|gb|EDK28246.1| putative anti-sigma B factor antagonist [Vibrionales bacterium SWAT-3] Length = 102 Score = 37.9 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 14/85 (16%) Query: 14 NWKSPE------ISEIADDVVMAINK-----SIQSDSAIVDLSAITEIDTIGAELIMYFM 62 W++ + +I D V AI + I S +DLS I +D+ G ++++ + Sbjct: 5 QWQALSSKEYQLLGDIDRDTVPAIWRILEKWQITESSVEIDLSHINRVDSAGMVMLIHLL 64 Query: 63 E---KYHGKIKLQGVSTHIEQLFSL 84 E + I L V + LF L Sbjct: 65 EHAKNQNCHIMLSFVPEQLRTLFQL 89 >gi|169829728|ref|YP_001699886.1| anti-sigma-B factor antagonist [Lysinibacillus sphaericus C3-41] gi|168994216|gb|ACA41756.1| Anti-sigma-B factor antagonist (Anti-anti-sigma-B factor) [Lysinibacillus sphaericus C3-41] Length = 127 Score = 37.9 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 3/69 (4%) Query: 33 KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY---HGKIKLQGVSTHIEQLFSLISFTH 89 K + +DLS + +D+ G + + F ++ +GK+KL G+ST +++LF + + Sbjct: 55 KITEGMEIELDLSKVNYMDSTGLGIFVAFYKRTLRENGKVKLVGLSTRLQRLFEITGLSD 114 Query: 90 RKKIKNQKP 98 I+ K Sbjct: 115 LMDIETDKK 123 >gi|21232130|ref|NP_638047.1| hypothetical protein XCC2699 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767741|ref|YP_242503.1| hypothetical protein XC_1415 [Xanthomonas campestris pv. campestris str. 8004] gi|188990858|ref|YP_001902868.1| Putative anti-anti-sigma factor [Xanthomonas campestris pv. campestris str. B100] gi|21113879|gb|AAM41971.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573073|gb|AAY48483.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] gi|167732618|emb|CAP50812.1| Putative anti-anti-sigma factor [Xanthomonas campestris pv. campestris] Length = 109 Score = 37.9 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 30/81 (37%), Gaps = 3/81 (3%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 G +E+ + A+ +DL+A++EIDT G +L++ + Sbjct: 12 LTLALEGEMTIRRAAELKPLLQPALA---HPGGVRLDLAAVSEIDTTGLQLLLATKQAVQ 68 Query: 67 GKIKLQGVSTHIEQLFSLISF 87 + ++ + +I Sbjct: 69 ADGRPFVLTDSSRAVVDVIEL 89 >gi|172035386|ref|YP_001801887.1| hypothetical protein cce_0470 [Cyanothece sp. ATCC 51142] gi|171696840|gb|ACB49821.1| hypothetical protein cce_0470 [Cyanothece sp. ATCC 51142] Length = 117 Score = 37.9 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 4/91 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62 + V G + I + + + + + D VD+ + ID+ G I+ Sbjct: 11 VAVLEPTGYITAANIDDFQEKLTNFVRNNPSRDYL-VDMHQVEFIDSAGLMAIVSAFRLA 69 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 ++ + K+ + +S + +F L +I Sbjct: 70 QRLNKKLSVCSLSPSVRIIFELTQLDRALEI 100 >gi|320330208|gb|EFW86193.1| STAS domain-containing protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330880449|gb|EGH14598.1| STAS domain-containing protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 96 Score = 37.9 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 6/87 (6%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--- 58 ++ T + G ++E+A ++ I + + VDLS +TE+D G +L+ Sbjct: 7 NQADATRVQIDGELTIYTVTELAARLLPQITGAAR---VEVDLSQVTEMDGAGLQLLAVI 63 Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLI 85 K + + G S + + F L Sbjct: 64 QREAGKTGTSLHMTGQSKAVTETFELC 90 >gi|313669178|ref|YP_004049462.1| hypothetical protein NLA_19050 [Neisseria lactamica ST-640] gi|313006640|emb|CBN88106.1| hypothetical protein NLA_19050 [Neisseria lactamica 020-06] Length = 83 Score = 37.9 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 27/77 (35%), Gaps = 2/77 (2%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 G+ ++E D+ + ++ VD + D+ L++ + + I Sbjct: 2 HIGGDITVKTLTE--DEFERFRQQCRLKETIAVDFGGVKRADSACVSLLLEILRRRKDSI 59 Query: 70 KLQGVSTHIEQLFSLIS 86 L G+ + L L Sbjct: 60 GLTGIPESVRALSELYE 76 >gi|242277488|ref|YP_002989617.1| anti-sigma-factor antagonist [Desulfovibrio salexigens DSM 2638] gi|242120382|gb|ACS78078.1| anti-sigma-factor antagonist [Desulfovibrio salexigens DSM 2638] Length = 102 Score = 37.9 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 37/82 (45%), Gaps = 5/82 (6%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG-AEL--IMYFMEK 64 + + +G ++ + + + ++ S VDLS + +D+ G A L + + K Sbjct: 15 LIKISGEVDFTGTPDLREKMHAFVKQT--SGEVRVDLSELEYLDSSGLASLIELRRILNK 72 Query: 65 YHGKIKLQGVSTHIEQLFSLIS 86 +K+ V+ +++L +L Sbjct: 73 DSRSVKIIAVTDQVDRLLNLTQ 94 >gi|294632658|ref|ZP_06711218.1| conserved hypothetical protein [Streptomyces sp. e14] gi|292835991|gb|EFF94340.1| conserved hypothetical protein [Streptomyces sp. e14] Length = 144 Score = 37.9 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 16/114 (14%), Positives = 32/114 (28%), Gaps = 11/114 (9%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G V F G I + + + ++DLS + D G L+ + Sbjct: 37 GHIVLEFRGEIDIAAAERITPFLDRVTGR--REARVVIDLSGVDFFDCSGLRLLYRARAR 94 Query: 65 Y---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIG 115 G+++L ++ + P R + + G Sbjct: 95 LLDREGELRLVCTHPLTLRVLKVTGLARLL------PPRPTLEAALERPQARSG 142 >gi|319945234|ref|ZP_08019496.1| hypothetical protein HMPREF0551_2344 [Lautropia mirabilis ATCC 51599] gi|319741804|gb|EFV94229.1| hypothetical protein HMPREF0551_2344 [Lautropia mirabilis ATCC 51599] Length = 418 Score = 37.9 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 34/79 (43%), Gaps = 4/79 (5%) Query: 21 SEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEKYHGKIKLQGVSTH 77 +++ + VD S +T ID IGA+L++ K ++ + GV Sbjct: 185 AQVVKQTEQMTRAIQRKRQLRVDFSRVTSIDMIGADLLLRTFRDFRKARHELTICGV-EA 243 Query: 78 IEQLFSLISFTHRKKIKNQ 96 +E+ S+++ + R+ Sbjct: 244 LEKALSVMTESGRRDPDEH 262 >gi|83590341|ref|YP_430350.1| anti-sigma-factor antagonist domain-containing protein [Moorella thermoacetica ATCC 39073] gi|83573255|gb|ABC19807.1| anti-sigma-factor antagonist (STAS) domain protein [Moorella thermoacetica ATCC 39073] Length = 113 Score = 37.9 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 37/85 (43%), Gaps = 4/85 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 E R G ++ ++ +++ + + ++DL+ +T +D+ G +I+ Sbjct: 8 EGKELQARIKGEVDLETADQLRQELEASLD-HARPEVLLLDLAGVTFMDSSGLGVILGRY 66 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSL 84 ++K G+I L + +L L Sbjct: 67 RRLQKKGGRIILYRPQPQVRRLLEL 91 >gi|127514228|ref|YP_001095425.1| anti-sigma-factor antagonist [Shewanella loihica PV-4] gi|126639523|gb|ABO25166.1| anti-sigma-factor antagonist [Shewanella loihica PV-4] Length = 97 Score = 37.9 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 11/84 (13%), Positives = 33/84 (39%), Gaps = 7/84 (8%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EKY 65 + +G + E+ + ++ + +DL+ ++ D+ G L+++ + +K Sbjct: 11 CQVSGELSQAAVVELWPKLETLLDGACDR----LDLAGVSYSDSAGVALLLHLVAEQQKK 66 Query: 66 HGKIKLQGVSTHIEQLFSLISFTH 89 + L +++L L Sbjct: 67 GQSLVLCNPPAQLQKLIDLYDLQD 90 >gi|94969770|ref|YP_591818.1| anti-sigma-factor antagonist [Candidatus Koribacter versatilis Ellin345] gi|94551820|gb|ABF41744.1| anti-sigma-factor antagonist [Candidatus Koribacter versatilis Ellin345] Length = 116 Score = 37.9 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 6/83 (7%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + + V R G E+ V I+ S ++D + +T +D+ G I+ + Sbjct: 17 DAAVPVVRCTGRLVLGLTDELLLPVKQLISAS---KRIVLDFTELTRMDSSGLGTIVRLL 73 Query: 63 ---EKYHGKIKLQGVSTHIEQLF 82 + ++L+ V I QL Sbjct: 74 VTAKAAGCSLELKNVGPPIRQLL 96 >gi|56459518|ref|YP_154799.1| STAS domain-containing protein [Idiomarina loihiensis L2TR] gi|56178528|gb|AAV81250.1| STAS domain [Idiomarina loihiensis L2TR] Length = 97 Score = 37.9 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 29/80 (36%), Gaps = 7/80 (8%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEK 64 F+G+ ++++ VDL+ + IDT G ++ + Sbjct: 12 TLVFSGSLTRHSVAKLWSQR----KSWSVGSETRVDLTDVEVIDTAGVAFLLEILKLVGD 67 Query: 65 YHGKIKLQGVSTHIEQLFSL 84 G + G S ++Q+ + Sbjct: 68 GKGPLTCIGASEQLKQIARV 87 >gi|109896885|ref|YP_660140.1| anti-sigma-factor antagonist [Pseudoalteromonas atlantica T6c] gi|109699166|gb|ABG39086.1| anti-sigma-factor antagonist [Pseudoalteromonas atlantica T6c] Length = 110 Score = 37.9 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 3/81 (3%) Query: 11 FAGNWKSPEISEIADDVVMAINKSIQS-DSAIVDLSAITEIDTIG-AELIMYFMEKYHGK 68 +GN I D + + + ++ +++L IT+IDT G A LI + Sbjct: 23 LSGNLNRDTIPNFWPDSLQQLTNAKRTNKPLVLNLEKITQIDTAGLAWLINLIRDAKKQD 82 Query: 69 IKLQGVSTHIEQLFSLISFTH 89 I+ ++ + L +L + Sbjct: 83 IEFSLLNP-PDTLLNLAKISD 102 >gi|67463658|pdb|1T6R|A Chain A, Solution Structure Of Tm1442, A Putative Anti Sigma Factor Antagonist In Phosphorylated State Length = 110 Score = 37.9 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 42/89 (47%), Gaps = 1/89 (1%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + ++ + R G+ + SE+ + + I+ + + ++DLS+++ +D G ++ Sbjct: 9 VEQDDKAIVRVQGDIDAYNSSELKEQLRNFISTTSK-KKIVLDLSSVSYMDXAGLGTLVV 67 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 ++ K +S+ E + ++ TH Sbjct: 68 ILKDAKINGKEFILSSLKESISRILKLTH 96 >gi|58581094|ref|YP_200110.1| hypothetical protein XOO1471 [Xanthomonas oryzae pv. oryzae KACC10331] gi|84623029|ref|YP_450401.1| hypothetical protein XOO_1372 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|166711349|ref|ZP_02242556.1| hypothetical protein Xoryp_07750 [Xanthomonas oryzae pv. oryzicola BLS256] gi|188575613|ref|YP_001912542.1| stas domain, putative [Xanthomonas oryzae pv. oryzae PXO99A] gi|58425688|gb|AAW74725.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84366969|dbj|BAE68127.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188520065|gb|ACD58010.1| stas domain, putative [Xanthomonas oryzae pv. oryzae PXO99A] Length = 109 Score = 37.9 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 30/81 (37%), Gaps = 3/81 (3%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 G +E+ + A+ + +DL A++EIDT G +L++ + Sbjct: 12 LTLALEGEMTIRRAAELKPLLQPAL---LHPGGLHLDLGAVSEIDTTGLQLLLATKQAIQ 68 Query: 67 GKIKLQGVSTHIEQLFSLISF 87 + ++ + +I Sbjct: 69 ADGRPFSLTDSSRAVVDVIEL 89 >gi|328876289|gb|EGG24652.1| ABC transporter A family protein [Dictyostelium fasciculatum] Length = 1702 Score = 37.5 bits (86), Expect = 2.9, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 MKI E +R MG++ S +LII+LP+ ++ G++IV + Sbjct: 344 MKIRE---GMRMMGMNETAYFTSWIATSLIIALPITILIIIVVK--GSAIVYHTGWGSVL 398 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFM 320 +F + + G I + F Sbjct: 399 LLFIFYLFTL-----LLLGFIASLFF 419 >gi|108797387|ref|YP_637584.1| anti-sigma-factor antagonist [Mycobacterium sp. MCS] gi|119866471|ref|YP_936423.1| anti-sigma-factor antagonist [Mycobacterium sp. KMS] gi|108767806|gb|ABG06528.1| anti-sigma-factor antagonist [Mycobacterium sp. MCS] gi|119692560|gb|ABL89633.1| anti-sigma-factor antagonist [Mycobacterium sp. KMS] Length = 113 Score = 37.5 bits (86), Expect = 2.9, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 5/91 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--- 58 +++G+ V R G + + ++ S +VDLSA ID+ G + Sbjct: 9 TDSGVLVIRPEGRLNMVAAPALRKQIHELVD--GGSARVVVDLSATEFIDSSGLGALISG 66 Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 + + G +++ + + + L + Sbjct: 67 LKVARQAGGDLRIAAPTRQVTTVLELTNLNR 97 >gi|195113899|ref|XP_002001505.1| GI10832 [Drosophila mojavensis] gi|193918099|gb|EDW16966.1| GI10832 [Drosophila mojavensis] Length = 787 Score = 37.5 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 38/127 (29%), Gaps = 13/127 (10%) Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 L + T+++ A + + I E++D G D + A Sbjct: 179 TYYASLLNMSPATTSLITAAAATKSYNDSI---LRWEQLDGSVDFGFDPLYRHS----LA 231 Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIP-FAVFFSRFHSTATLANIFTGLIKAPFMA 321 + I + I+ +IG S VI P + F +A+I Sbjct: 232 MSIVYCVAYIVVFVVGLIGNSFVIAVVLRAPRMRTVTNYFIVNLAIADILV-----IVFC 286 Query: 322 CAIGIVA 328 ++ Sbjct: 287 LPATLIG 293 >gi|111020564|ref|YP_703536.1| anti-sigma factor antagonist, RsbV [Rhodococcus jostii RHA1] gi|110820094|gb|ABG95378.1| anti-sigma factor antagonist, possible RsbV [Rhodococcus jostii RHA1] Length = 112 Score = 37.5 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 37/91 (40%), Gaps = 5/91 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--- 58 ++ G+ V R AG + + + ++ +VDLSA ID+ G + Sbjct: 9 TDEGVAVVRPAGRLNMVAAPRLRELLRDVVDGGTTC--VVVDLSATDFIDSSGLGALIAG 66 Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 + + G +++ + +E + +L + Sbjct: 67 LKAARQAGGDLRIAQPTEQVETVLALTNLNR 97 >gi|59802418|ref|YP_209130.1| hypothetical protein NGO2120 [Neisseria gonorrhoeae FA 1090] gi|240013252|ref|ZP_04720165.1| hypothetical protein NgonD_01145 [Neisseria gonorrhoeae DGI18] gi|240015699|ref|ZP_04722239.1| hypothetical protein NgonFA_00778 [Neisseria gonorrhoeae FA6140] gi|240112042|ref|ZP_04726532.1| hypothetical protein NgonM_00390 [Neisseria gonorrhoeae MS11] gi|240114789|ref|ZP_04728851.1| hypothetical protein NgonPID1_00788 [Neisseria gonorrhoeae PID18] gi|240120324|ref|ZP_04733286.1| hypothetical protein NgonPI_00825 [Neisseria gonorrhoeae PID24-1] gi|240124815|ref|ZP_04737701.1| hypothetical protein NgonSK_01085 [Neisseria gonorrhoeae SK-92-679] gi|254492851|ref|ZP_05106022.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|260441398|ref|ZP_05795214.1| hypothetical protein NgonDG_10010 [Neisseria gonorrhoeae DGI2] gi|268598100|ref|ZP_06132267.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268600443|ref|ZP_06134610.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|268683394|ref|ZP_06150256.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] gi|293397852|ref|ZP_06642058.1| hypothetical protein NGNG_00846 [Neisseria gonorrhoeae F62] gi|59719313|gb|AAW90718.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090] gi|226511891|gb|EEH61236.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|268582231|gb|EEZ46907.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268584574|gb|EEZ49250.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|268623678|gb|EEZ56078.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] gi|291611798|gb|EFF40867.1| hypothetical protein NGNG_00846 [Neisseria gonorrhoeae F62] Length = 92 Score = 37.5 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 26/80 (32%), Gaps = 4/80 (5%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFMEKYH 66 G+ ++ D + + I VD + D+ L++ + Sbjct: 9 TLHIGGDITVKTLT---GDAFGRFRQQCRLKETIAVDFGGVKRADSACMSLLLEVLRGCK 65 Query: 67 GKIKLQGVSTHIEQLFSLIS 86 G ++L G+ + L L Sbjct: 66 GSVRLTGIPESVRALSELYE 85 >gi|289664636|ref|ZP_06486217.1| putative anti-anti-sigma factor [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289667200|ref|ZP_06488275.1| putative anti-anti-sigma factor [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 109 Score = 37.5 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 30/81 (37%), Gaps = 3/81 (3%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 G +E+ + A+ + +DL A++EIDT G +L++ + Sbjct: 12 LTLALEGEMTIRRAAELKPLLQPAL---LHPGGLHLDLGAVSEIDTTGLQLLLATKQAIQ 68 Query: 67 GKIKLQGVSTHIEQLFSLISF 87 + ++ + +I Sbjct: 69 ADGRPFSLTDSSRAVVDVIEL 89 >gi|320538925|ref|ZP_08038601.1| putative conserved hypothetical protein [Serratia symbiotica str. Tucson] gi|320031085|gb|EFW13088.1| putative conserved hypothetical protein [Serratia symbiotica str. Tucson] Length = 119 Score = 37.5 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 11/85 (12%), Positives = 34/85 (40%), Gaps = 8/85 (9%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E+ + G + + ++ +D +D++ + +D+ G L+++ Sbjct: 8 ESQLQTLILRGVLDRETLLPLWQQ-----RGALMADKTEIDVAQLQRVDSAGLALLVHLR 62 Query: 63 ---EKYHGKIKLQGVSTHIEQLFSL 84 + ++K+ G + + L +L Sbjct: 63 AHQHQRGVELKISGATDRLRTLVAL 87 >gi|294138951|ref|YP_003554929.1| hypothetical protein SVI_0180 [Shewanella violacea DSS12] gi|293325420|dbj|BAJ00151.1| hypothetical protein [Shewanella violacea DSS12] Length = 104 Score = 37.5 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 12/94 (12%), Positives = 28/94 (29%), Gaps = 6/94 (6%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFMEKY 65 R I I + + + +D S ++ +DT GA+L+ Sbjct: 6 IRLDSELTIRNIQPIFTQLSALLT---HDEELHIDASQLSRVDTAGAQLLYLFSRTCASR 62 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 K+ ++ + + + + P Sbjct: 63 SLKVDWLNCRPELKANLENLGISIPEIAIQELPA 96 >gi|161506128|ref|YP_001573240.1| hypothetical protein SARI_04316 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160867475|gb|ABX24098.1| hypothetical protein SARI_04316 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 98 Score = 37.5 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 33/80 (41%), Gaps = 8/80 (10%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 AG ++ + D V A+ + +D+S I+ +DT G L+ + +K Sbjct: 13 TLMLAGELDQDVLTPLWDARVEAM-----TGVTRIDMSQISRVDTGGLALLAHLVNQAKK 67 Query: 65 YHGKIKLQGVSTHIEQLFSL 84 + L GV+ + L L Sbjct: 68 QGNAVSLSGVNDKVYALAQL 87 >gi|224371179|ref|YP_002605343.1| RsbV [Desulfobacterium autotrophicum HRM2] gi|223693896|gb|ACN17179.1| RsbV [Desulfobacterium autotrophicum HRM2] Length = 113 Score = 37.5 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 47/106 (44%), Gaps = 5/106 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++ I VF+ G S + + + + ++K S ++D + I + G +I+ M Sbjct: 8 QDQIEVFKVKGRLDSNTSPLLEEQLNLCLDK--GSTRMVIDFEGLEYISSAGIRVILKTM 65 Query: 63 EKYH---GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105 +K GK+ L + +++++F + F ++ + + + Sbjct: 66 KKLEHTQGKLVLCTLQDYVQEVFEIAGFDTYLTLEPTREKAIASWE 111 >gi|300787020|ref|YP_003767311.1| anti-anti-sigma factor [Amycolatopsis mediterranei U32] gi|299796534|gb|ADJ46909.1| anti-anti-sigma factor [Amycolatopsis mediterranei U32] Length = 114 Score = 37.5 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 10/82 (12%), Positives = 25/82 (30%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E G AG+ + + V + +D + D+ ++ + Sbjct: 13 EEGTARVTIAGDLEFATTGTLLRLVTDRLAACPGVREVRLDCGELGFCDSSELLKVLRVV 72 Query: 63 EKYHGKIKLQGVSTHIEQLFSL 84 +++L E+L + Sbjct: 73 ADAGARLRLDHRRAAPERLLTR 94 >gi|119776209|ref|YP_928949.1| SpoIIAA family protein [Shewanella amazonensis SB2B] gi|119768709|gb|ABM01280.1| SpoIIAA family protein [Shewanella amazonensis SB2B] Length = 96 Score = 37.5 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 31/67 (46%) Query: 21 SEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQ 80 + + + + + +D++ +DL ++ D+ G ++ ++ H + + + + Q Sbjct: 19 AAVVKQLWPEVATLVPADTSCLDLRQLSYSDSAGVAFLLELWQRAHSRGQSITLMSPSPQ 78 Query: 81 LFSLISF 87 L LI+ Sbjct: 79 LGKLIAL 85 >gi|83309678|ref|YP_419942.1| anti-anti-sigma regulatory factor [Magnetospirillum magneticum AMB-1] gi|82944519|dbj|BAE49383.1| Anti-anti-sigma regulatory factor [Magnetospirillum magneticum AMB-1] Length = 132 Score = 37.5 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 38/85 (44%), Gaps = 5/85 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++ R G + +++ SI++ +VDL+ + +D++G ++ Sbjct: 40 QDDTLTVRLDG--TMDYTVTSQMNSLISDIGSIKAARVVVDLTKVARVDSVGLGMLHLAK 97 Query: 63 EKY---HGKIKLQGVSTHIEQLFSL 84 ++ + L+G S ++ +LF L Sbjct: 98 DEIVSNGRHLTLRGASGNVRRLFEL 122 >gi|77166235|ref|YP_344760.1| Sulfate transporter/antisigma-factor antagonist STAS [Nitrosococcus oceani ATCC 19707] gi|254435658|ref|ZP_05049165.1| hypothetical protein NOC27_2721 [Nitrosococcus oceani AFC27] gi|76884549|gb|ABA59230.1| Sulfate transporter/antisigma-factor antagonist STAS [Nitrosococcus oceani ATCC 19707] gi|207088769|gb|EDZ66041.1| hypothetical protein NOC27_2721 [Nitrosococcus oceani AFC27] Length = 123 Score = 37.5 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 26/63 (41%), Gaps = 2/63 (3%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + FR G + E+A+ + N++ +DL ++ D+ G L++ Sbjct: 5 IEPQQKGHFRIVGELTFNTVPEVAEKGLALFNEA--GADLRIDLREVSRTDSAGLALLIA 62 Query: 61 FME 63 ++ Sbjct: 63 WLR 65 >gi|293391908|ref|ZP_06636242.1| anti-sigma factor B antagonist [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952442|gb|EFE02561.1| anti-sigma factor B antagonist [Aggregatibacter actinomycetemcomitans D7S-1] Length = 89 Score = 37.5 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 8/33 (24%), Positives = 16/33 (48%) Query: 31 INKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + + ++ DLS + ID+ G L+ F+ Sbjct: 13 LARKTETLDVHWDLSQVNRIDSAGFALLCDFLR 45 >gi|269957911|ref|YP_003327700.1| anti-sigma-factor antagonist [Xylanimonas cellulosilytica DSM 15894] gi|269306592|gb|ACZ32142.1| anti-sigma-factor antagonist [Xylanimonas cellulosilytica DSM 15894] Length = 128 Score = 37.5 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 10/79 (12%), Positives = 27/79 (34%), Gaps = 3/79 (3%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 +G + +E+++ M+ +D IT +D+ G + + Sbjct: 34 RARIVLSGEIDADIGAELSE---MSAEAEATGLPVEIDAHHITFMDSSGVAFLARLATRM 90 Query: 66 HGKIKLQGVSTHIEQLFSL 84 K+++ + L + Sbjct: 91 PQKVRILRAPPTVRFLLDV 109 >gi|329916013|ref|ZP_08276326.1| anti-sigma-factor antagonist (STAS) domain protein [Oxalobacteraceae bacterium IMCC9480] gi|327544812|gb|EGF30203.1| anti-sigma-factor antagonist (STAS) domain protein [Oxalobacteraceae bacterium IMCC9480] Length = 107 Score = 37.5 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 33/86 (38%), Gaps = 6/86 (6%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 V R G EI + + + +DLS ++E+DT G +L+M + Sbjct: 3 TRVLRIDGELTIYRADEIK---ALLLAALAEPSDLELDLSGVSELDTAGLQLLMLAKKTA 59 Query: 66 HG---KIKLQGVSTHIEQLFSLISFT 88 + L ST + +F L+ Sbjct: 60 LAGSHALHLVAHSTAVTGVFELLDLA 85 >gi|71906780|ref|YP_284367.1| Sulfate transporter/antisigma-factor antagonist STAS [Dechloromonas aromatica RCB] gi|71846401|gb|AAZ45897.1| Sulfate transporter/antisigma-factor antagonist STAS [Dechloromonas aromatica RCB] Length = 101 Score = 37.5 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 36/79 (45%), Gaps = 3/79 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 + + E+ ++ A+ + + ++L+ ++E+DT G +L++ ++ Sbjct: 7 LVISDDLTIYHALELKPVLLNALAAT---NELELNLAQVSEMDTAGLQLLILLKKEAQKT 63 Query: 69 IKLQGVSTHIEQLFSLISF 87 K + H + + S+I F Sbjct: 64 GKCVRIVAHSQAVSSVIDF 82 >gi|171058218|ref|YP_001790567.1| anti-sigma-factor antagonist [Leptothrix cholodnii SP-6] gi|170775663|gb|ACB33802.1| anti-sigma-factor antagonist [Leptothrix cholodnii SP-6] Length = 110 Score = 37.5 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 32/96 (33%), Gaps = 4/96 (4%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEKY 65 F G +E ++ A+ +DL I D+ G +L++ +++ Sbjct: 12 FALGGELCIQTAAEQRQVLIDALG-QADGRDLALDLHEIHGCDSAGVQLLLATRLQLQRS 70 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 ++ L+ +S + ++ R Sbjct: 71 GRRLHLEALSPVVREVLRTYGLQALFDSPPTPGDRR 106 >gi|108800291|ref|YP_640488.1| anti-sigma-factor antagonist [Mycobacterium sp. MCS] gi|119869419|ref|YP_939371.1| anti-sigma-factor antagonist [Mycobacterium sp. KMS] gi|126435914|ref|YP_001071605.1| anti-sigma-factor antagonist [Mycobacterium sp. JLS] gi|108770710|gb|ABG09432.1| anti-sigma-factor antagonist [Mycobacterium sp. MCS] gi|119695508|gb|ABL92581.1| anti-sigma-factor antagonist [Mycobacterium sp. KMS] gi|126235714|gb|ABN99114.1| anti-sigma-factor antagonist [Mycobacterium sp. JLS] Length = 126 Score = 37.5 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 15/108 (13%), Positives = 32/108 (29%), Gaps = 3/108 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTI---GAELI 58 + + R AG + SE D + + + +D + +T D+ G LI Sbjct: 9 AADRSATVRIAGELDAETTSEFVDTASRLLETNPGLRALRLDCADMTFCDSAGLSGLLLI 68 Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106 + L T+ E++ + + + Sbjct: 69 ERRTTAAGVDLHLDNRPTYFERVLDITGILEYIAGRRATSAPAPTEEP 116 >gi|307718375|ref|YP_003873907.1| anti-anti-sigma factor [Spirochaeta thermophila DSM 6192] gi|306532100|gb|ADN01634.1| anti-anti-sigma factor [Spirochaeta thermophila DSM 6192] Length = 130 Score = 37.5 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 36/115 (31%), Gaps = 5/115 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61 E + +G + I D + + + DL +T ID+ G ++Y Sbjct: 8 EKHSFILSLSGELDLYQAPRIKDMLQKVFPEH--PARIVFDLDGLTYIDSSGIGALLYAY 65 Query: 62 --MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI 114 ++ L + ++++ L H I + S + + Sbjct: 66 SEAKRRDIAFYLVNLHGSVKRVIELTKLLHYFPIAPSLEEALHEEESSADPSEEM 120 >gi|296130799|ref|YP_003638049.1| anti-sigma-factor antagonist [Cellulomonas flavigena DSM 20109] gi|296022614|gb|ADG75850.1| anti-sigma-factor antagonist [Cellulomonas flavigena DSM 20109] Length = 139 Score = 37.5 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 28/79 (35%), Gaps = 3/79 (3%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 T +G + E+ + A + + VD +T +D+ G + + Sbjct: 38 RTRIVLSGEVDADLGPELQEATAEAEERGL---PIEVDAHHVTFMDSSGVAFLARLSIRS 94 Query: 66 HGKIKLQGVSTHIEQLFSL 84 +++L V + L + Sbjct: 95 EHRVRLLRVPPTVRFLLEV 113 >gi|167750691|ref|ZP_02422818.1| hypothetical protein EUBSIR_01669 [Eubacterium siraeum DSM 15702] gi|167656370|gb|EDS00500.1| hypothetical protein EUBSIR_01669 [Eubacterium siraeum DSM 15702] Length = 137 Score = 37.5 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 39/90 (43%), Gaps = 4/90 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 NG +G E S I + + + + S I+D+S ++ +D+ G LI+ Sbjct: 37 RNGGITAVISGEIGHFEASGIRIRIDAELERLMPS-MLILDMSGVSFMDSSGIGLILGRQ 95 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 ME + G + ++ S + ++ + + Sbjct: 96 RIMESFGGGVAVKNPSPSVRRIIQVAGLSR 125 >gi|197117437|ref|YP_002137864.1| hypothetical protein Gbem_1047 [Geobacter bemidjiensis Bem] gi|197086797|gb|ACH38068.1| conserved hypothetical protein [Geobacter bemidjiensis Bem] Length = 105 Score = 37.5 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 35/82 (42%), Gaps = 6/82 (7%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDS--AIVDLSAITEIDTIGAELIMYFMEKY 65 F G+ E +E+ +V + + ++ + A +DL + ID G +L+ F+E Sbjct: 11 HITFQGSCSREEAAELHRALVCRLTELVERKAEQAELDLRQVDRIDACGCQLLALFLEDL 70 Query: 66 HGKIKLQGVSTHIEQLFSLISF 87 G++ QL ++ Sbjct: 71 RRH----GITPAACQLGPELAA 88 >gi|72163163|ref|YP_290820.1| anti-sigma factor antagonist [Thermobifida fusca YX] gi|71916895|gb|AAZ56797.1| anti-sigma factor antagonist [Thermobifida fusca YX] Length = 122 Score = 37.5 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 15/108 (13%), Positives = 39/108 (36%), Gaps = 5/108 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 EN + G+ ++ V A++ I+D SA+ +D+ G I+ Sbjct: 11 ENRSVIVSVEGDLDIATAGDLRSAVQSAVDAH--GPWLILDFSALDFMDSSGLNAIIHAY 68 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF 107 + + + G + L + + ++ L+ + + + + Sbjct: 69 HLVRERGGSLALAAPNERVTKVIRLVGLHRQLPVHRTVAEAVAAMRAL 116 >gi|271961736|ref|YP_003335932.1| anti-sigma F factor antagonist [Streptosporangium roseum DSM 43021] gi|270504911|gb|ACZ83189.1| anti-sigma F factor antagonist [Streptosporangium roseum DSM 43021] Length = 117 Score = 37.5 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 13/108 (12%), Positives = 37/108 (34%), Gaps = 4/108 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S G TV G + + + +S + ++D+S + D+ G +++ Sbjct: 9 SHAGHTVMTIVGEIDLYTAPGLQSEFTRLLQESPTT-YVVIDMSGVEFCDSTGMNVLLSA 67 Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106 +++ G ++L + ++ + + P + Sbjct: 68 LKRLKERGGTLELAAPRPAVRKILQVTGLDSVFTVHEAVPGKLLTAEP 115 >gi|239787369|emb|CAX83845.1| Anti-sigma factor antagonist [uncultured bacterium] Length = 108 Score = 37.5 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 32/91 (35%), Gaps = 6/91 (6%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + G V G + ++ +++ +VD+S ++ ID+ G ++ Sbjct: 7 EDRGFLVMTLDGEADLQHTPTLRKMLLESVS---GGKPVVVDMSNVSYIDSSGVASLVEA 63 Query: 62 MEKYHGK---IKLQGVSTHIEQLFSLISFTH 89 + K L G+S ++ L Sbjct: 64 YQSARKKGFSFALAGLSPAALRVLQLARLDR 94 >gi|238064434|ref|ZP_04609143.1| hypothetical protein MCAG_05400 [Micromonospora sp. ATCC 39149] gi|237886245|gb|EEP75073.1| hypothetical protein MCAG_05400 [Micromonospora sp. ATCC 39149] Length = 135 Score = 37.5 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 14/115 (12%), Positives = 42/115 (36%), Gaps = 5/115 (4%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI-- 58 +S+ + R G+ + + +V + + + ++D + + ID+ G +I Sbjct: 21 LSDPDAPLIRVGGDLAFTTAAPLRREVDRQLAE--RPSVLVLDFAGLRFIDSTGLSVIVH 78 Query: 59 -MYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHY 112 ++ I+L+ ++ + + T +RS+ + + Sbjct: 79 AWREGQQCDTAIRLRSTPRFLDTILDMTGVTGLLARPLPDGERSYGASGSRRPAA 133 >gi|331694199|ref|YP_004330438.1| sulfate transporter/antisigma-factor antagonist STAS [Pseudonocardia dioxanivorans CB1190] gi|326948888|gb|AEA22585.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudonocardia dioxanivorans CB1190] Length = 139 Score = 37.5 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 21/56 (37%), Gaps = 1/56 (1%) Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 +G + + + +V + + I+DL+ I DT G E + + Sbjct: 26 LSGR-TGSRLVRLVERLVEDTPRPAGPGALIIDLAQIRRFDTDGVEALHRAFGRAG 80 >gi|310766234|gb|ADP11184.1| Anti-sigma B factor antagonist [Erwinia sp. Ejp617] Length = 98 Score = 37.5 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 32/79 (40%), Gaps = 8/79 (10%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---KY 65 R G + + + +++ +D+SA+ +D+ G L+++ + Sbjct: 14 LRLIGELERETLLPLWQQ-----REAVMERVETIDVSALERVDSGGLALLVHLRQIAIDN 68 Query: 66 HGKIKLQGVSTHIEQLFSL 84 K + GV+ + L +L Sbjct: 69 GRKPRFSGVTDKLNSLITL 87 >gi|256833012|ref|YP_003161739.1| arginyl-tRNA synthetase [Jonesia denitrificans DSM 20603] gi|256686543|gb|ACV09436.1| arginyl-tRNA synthetase [Jonesia denitrificans DSM 20603] Length = 558 Score = 37.5 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 51/150 (34%), Gaps = 17/150 (11%) Query: 13 GNW---KSPEISEIADDVVMAINKSI------QSDSAIVDLSA-----ITEIDTIGAELI 58 G+W + ++++ A + ++ Q+ A VD++ IT +DT A + Sbjct: 45 GDWATNVALQLAKKAGQPPRVLADALAARLQEQAGIARVDVAGPGFLNIT-LDTAAAGEL 103 Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + + G+ V +S I + + +S + G + Sbjct: 104 ARTIVEAGGEYGRSAVRAGRTINLEFVSANPTGPIHIGGTRWAAVGDSLARILQATGAHV 163 Query: 119 VK--FINDSCSQAHILGLVISNTGEFCASS 146 VK + ND +Q + + + Sbjct: 164 VKEYYFNDHGAQIDRFARSLVASAQGLPVP 193 >gi|77165087|ref|YP_343612.1| Sulfate transporter/antisigma-factor antagonist STAS [Nitrosococcus oceani ATCC 19707] gi|254433230|ref|ZP_05046738.1| STAS domain protein [Nitrosococcus oceani AFC27] gi|76883401|gb|ABA58082.1| Sulfate transporter/antisigma-factor antagonist STAS [Nitrosococcus oceani ATCC 19707] gi|207089563|gb|EDZ66834.1| STAS domain protein [Nitrosococcus oceani AFC27] Length = 170 Score = 37.5 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 30/70 (42%), Gaps = 1/70 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +G+ V R G+ + P +S D + + + +VDL+ ID+ L++ Sbjct: 11 HDGVHVLRLLGDMRYP-LSPSLDHFLQRLFSEVTPQGFVVDLTDTRSIDSTNLGLLVRIA 69 Query: 63 EKYHGKIKLQ 72 + + + + Sbjct: 70 KLMQRRGQPR 79 >gi|23014474|ref|ZP_00054288.1| COG1366: Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Magnetospirillum magnetotacticum MS-1] Length = 103 Score = 37.5 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 41/91 (45%), Gaps = 6/91 (6%) Query: 1 MSENG-ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 +S NG + + +G++ E +A V+ S + S VDL+ I +D+ +++ Sbjct: 7 LSRNGNVLTIKLSGDFSFSE--NMAFRTVVDAVVSSGASSVEVDLTGIGSLDSAALSMLI 64 Query: 60 YFMEKY---HGKIKLQGVSTHIEQLFSLISF 87 E+ G + L ++++ ++ F Sbjct: 65 LLRERLAKAGGTLTLVKPPPQVDRILEVVDF 95 >gi|21245055|ref|NP_644637.1| hypothetical protein XAC4343 [Xanthomonas axonopodis pv. citri str. 306] gi|21110786|gb|AAM39173.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 96 Score = 37.5 bits (86), Expect = 3.8, Method: Composition-based stats. Identities = 9/90 (10%), Positives = 32/90 (35%), Gaps = 7/90 (7%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66 G ++ + ++ + +DLS + +D+ G ++ + Sbjct: 12 TLVITGVLDRAAVTAAWPQAIAQLD-----GARALDLSGVQRLDSAGVAMLAELAARLRQ 66 Query: 67 -GKIKLQGVSTHIEQLFSLISFTHRKKIKN 95 G ++ G ++ +++L + + + Sbjct: 67 AGSGEVVGEASGLDELRAAYRLSPTLDFQA 96 >gi|31793156|ref|NP_855649.1| integral membrane protein YrbE3A [Mycobacterium bovis AF2122/97] gi|121637870|ref|YP_978093.1| integral membrane protein YrbE3a [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990354|ref|YP_002645041.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|260205254|ref|ZP_05772745.1| hypothetical integral membrane protein [Mycobacterium tuberculosis K85] gi|289574649|ref|ZP_06454876.1| integral membrane protein YrbE3a [Mycobacterium tuberculosis K85] gi|31618747|emb|CAD94701.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE3A [Mycobacterium bovis AF2122/97] gi|121493517|emb|CAL71991.1| Conserved hypothetical integral membrane protein yrbE3A [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773467|dbj|BAH26273.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|289539080|gb|EFD43658.1| integral membrane protein YrbE3a [Mycobacterium tuberculosis K85] Length = 134 Score = 37.5 bits (86), Expect = 3.8, Method: Composition-based stats. Identities = 12/94 (12%), Positives = 31/94 (32%), Gaps = 4/94 (4%) Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 G+ + + + + + + ++ +LL Q ++V +L+ Sbjct: 10 GRVADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLL----QCWFVARVSTLPGVLM 65 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL 208 + + L+ GA FS +I + Sbjct: 66 TIPWAVISGFLFNVLLTDIGAADFSGTGCAIFTV 99 >gi|256393986|ref|YP_003115550.1| anti-sigma-factor antagonist [Catenulispora acidiphila DSM 44928] gi|256360212|gb|ACU73709.1| anti-sigma-factor antagonist [Catenulispora acidiphila DSM 44928] Length = 118 Score = 37.1 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 11/85 (12%), Positives = 32/85 (37%), Gaps = 3/85 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G V AG+ + + + S + +D SA+T +D++G +++ ++ Sbjct: 12 GRVVVTLAGDVDLAAFRRFEAGLAQSWDGST---NLTIDCSAVTFLDSMGLRVLVRARQR 68 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89 + ++ + ++ Sbjct: 69 AADHDRDVTLAAPSRPVLRVLQLAE 93 >gi|325915570|ref|ZP_08177880.1| putative NTP binding protein (contains STAS domain) [Xanthomonas vesicatoria ATCC 35937] gi|325538208|gb|EGD09894.1| putative NTP binding protein (contains STAS domain) [Xanthomonas vesicatoria ATCC 35937] Length = 97 Score = 37.1 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 8/90 (8%), Positives = 30/90 (33%), Gaps = 7/90 (7%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 G ++ + ++ +DL+ + +D+ G ++ + G Sbjct: 13 TLALTGVLDRAAVTAAWPQAIAQLD-----GVRTLDLTGVQRLDSAGVAMLAELAARLRG 67 Query: 68 K--IKLQGVSTHIEQLFSLISFTHRKKIKN 95 + G ++ +++L + + + Sbjct: 68 NGTAAVVGEASGLDELRAAYRLSPTLDFQA 97 >gi|256376432|ref|YP_003100092.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827] gi|255920735|gb|ACU36246.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827] Length = 118 Score = 37.1 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 37/95 (38%), Gaps = 1/95 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA-ELIMYFM 62 G V +G + + +++ A+ + + +VDL+ + + G EL+ + Sbjct: 16 GGAVVLHVSGEIDQLTVEPLHRELLSALARVRPPEPVVVDLTEVGFFGSAGLNELVTGHL 75 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97 + +L V+ H E L L +++ Sbjct: 76 QAELLGTRLSVVAGHREVLRPLAISGLDEQLDVHP 110 >gi|126433008|ref|YP_001068699.1| anti-sigma-factor antagonist [Mycobacterium sp. JLS] gi|126232808|gb|ABN96208.1| anti-sigma-factor antagonist [Mycobacterium sp. JLS] Length = 113 Score = 37.1 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 5/91 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--- 58 +++G+ V R G + + ++ S +VDLSA ID+ G + Sbjct: 9 TDSGVLVIRPEGRLNMVAAPALRKQIHELVD--GGSTRVVVDLSATEFIDSSGLGALISG 66 Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 + + G +++ + + + L + Sbjct: 67 LKVARQAGGDLRIAAPTRQVTTVLELTNLNR 97 >gi|313202373|ref|YP_004041031.1| anti-sigma-factor antagonist [Methylovorus sp. MP688] gi|312441689|gb|ADQ85795.1| anti-sigma-factor antagonist [Methylovorus sp. MP688] Length = 96 Score = 37.1 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 3/73 (4%) Query: 19 EISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EKYHGKIKLQGVS 75 I E A+ + Q + +DL+ +TEIDT G +L++ ++ + + G S Sbjct: 11 TIFEAAEYHAALLPPVTQCHTLELDLTNVTEIDTSGLQLLVSAKLRSQQTGSTLSITGHS 70 Query: 76 THIEQLFSLISFT 88 ++Q+ Sbjct: 71 ETVQQVLDATDLA 83 >gi|299538304|ref|ZP_07051589.1| anti-sigma-B factor antagonist [Lysinibacillus fusiformis ZC1] gi|298726506|gb|EFI67096.1| anti-sigma-B factor antagonist [Lysinibacillus fusiformis ZC1] Length = 110 Score = 37.1 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 3/69 (4%) Query: 33 KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY---HGKIKLQGVSTHIEQLFSLISFTH 89 K + +DLS + +D+ G + + F ++ +GK+KL G+S +++LF + + Sbjct: 38 KITEGLEIELDLSKVNYMDSTGLGIFVAFYKRALRENGKVKLVGLSNRLQRLFEITGLSD 97 Query: 90 RKKIKNQKP 98 I+ K Sbjct: 98 LMDIETDKK 106 >gi|119486322|ref|ZP_01620381.1| hypothetical protein L8106_16749 [Lyngbya sp. PCC 8106] gi|119456535|gb|EAW37665.1| hypothetical protein L8106_16749 [Lyngbya sp. PCC 8106] Length = 392 Score = 37.1 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 58/138 (42%), Gaps = 23/138 (16%) Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF--SIDLM 203 S++F F LS++ + Y + P + + T ++ F L + AE M Sbjct: 11 SFQFPSFYLSILDR-YIISELIAPFLFGVGLFTSVALSIDTVFDLVRKVAESGLDVGIAM 69 Query: 204 SILQLRE---------IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 I L+ + ++LT +++ GR M + EI A+R+ G+ R+ Sbjct: 70 QIFLLKMPEFVVLSFPMSMVLTTLIVYGR-----------MSSDSEIVALRSCGISIYRL 118 Query: 255 LISPRIWALIISLPLLTI 272 +I I++L I+ + Sbjct: 119 VIPTLIFSLFITASMFVF 136 >gi|307154202|ref|YP_003889586.1| anti-sigma-factor antagonist [Cyanothece sp. PCC 7822] gi|306984430|gb|ADN16311.1| anti-sigma-factor antagonist [Cyanothece sp. PCC 7822] Length = 118 Score = 37.1 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 33/81 (40%), Gaps = 4/81 (4%) Query: 16 KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFMEKYHGKIKLQ 72 + ISE +++ +++ S ++D++ + +D+ G + EK + L Sbjct: 20 TAANISEFQEELTLSLT-SGDHSVFLIDMTKVEFLDSAGLMALASAFRLAEKLGKRFSLC 78 Query: 73 GVSTHIEQLFSLISFTHRKKI 93 + ++ +F L I Sbjct: 79 SIPPSVKIIFELTQLDRVLDI 99 >gi|323492705|ref|ZP_08097849.1| putative anti-sigma regulatory factor [Vibrio brasiliensis LMG 20546] gi|323313080|gb|EGA66200.1| putative anti-sigma regulatory factor [Vibrio brasiliensis LMG 20546] Length = 106 Score = 37.1 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 34/92 (36%), Gaps = 4/92 (4%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY-- 65 GN + S A + I +D S + +D+ G I+Y ++ Sbjct: 14 TLIINGNLDADG-SRSAQPHIDQIIAEDSGRDVEIDFSQVQFLDSSGVGAIVYLYKRLIE 72 Query: 66 -HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96 ++++ VS ++ +L+ + + + Sbjct: 73 RQRSMRIENVSGQPLEIINLLRISQAIPVNSH 104 >gi|259907022|ref|YP_002647378.1| Anti-sigma B factor antagonist [Erwinia pyrifoliae Ep1/96] gi|224962644|emb|CAX54099.1| Anti-sigma B factor antagonist [Erwinia pyrifoliae Ep1/96] gi|283476817|emb|CAY72655.1| Uncharacterized protein yrbB [Erwinia pyrifoliae DSM 12163] Length = 98 Score = 37.1 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 32/79 (40%), Gaps = 8/79 (10%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---KY 65 R G + + + +++ +D+SA+ +D+ G L+++ + Sbjct: 14 LRLIGELERETLLPLWQQ-----REAVMERVETIDVSALERVDSGGLALLVHLRQIAIDN 68 Query: 66 HGKIKLQGVSTHIEQLFSL 84 K + GV+ + L +L Sbjct: 69 GRKPRFSGVTDKLNSLITL 87 >gi|183220963|ref|YP_001838959.1| putative anti-sigma factor antagonist [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911058|ref|YP_001962613.1| antagonist of anti-sigma factor [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775734|gb|ABZ94035.1| Antagonist of anti-sigma factor [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779385|gb|ABZ97683.1| Putative anti-sigma factor antagonist [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 113 Score = 37.1 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 36/81 (44%), Gaps = 5/81 (6%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MYFMEK 64 + GN +I D++ ++ S S I +LS + I + G L+ + ++ Sbjct: 18 IVHVQGNLDVHNTHKIEKDLLTLVSSS--GKSVIFNLSEVPFISSAGLRLLVTTLRHCQE 75 Query: 65 YHGKIKLQGVSTHIEQLFSLI 85 I + G+ +E++F +I Sbjct: 76 QKISIAICGLQPAVEKVFDII 96 >gi|86739156|ref|YP_479556.1| anti-sigma-factor antagonist domain-containing protein [Frankia sp. CcI3] gi|86566018|gb|ABD09827.1| anti-sigma-factor antagonist (STAS) domain protein [Frankia sp. CcI3] Length = 115 Score = 37.1 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 39/85 (45%), Gaps = 5/85 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +++ V AG+ + + + ++ A + IVDL ++ +D+ G +I++ Sbjct: 5 VTDRDAIVVHPAGDIDYSSLDPLREALLDA--RVAGVKEIIVDLEQVSFLDSQGLAVILF 62 Query: 61 FMEK---YHGKIKLQGVSTHIEQLF 82 ++ G++ L+ ++ +L Sbjct: 63 AHQRQRSAGGRLVLRNLNEDAYRLL 87 >gi|21233048|ref|NP_638965.1| anti-sigma F factor antagonist [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66766921|ref|YP_241683.1| anti-sigma F factor antagonist [Xanthomonas campestris pv. campestris str. 8004] gi|188989994|ref|YP_001902004.1| anti-anti-sigma factor [Xanthomonas campestris pv. campestris str. B100] gi|21114898|gb|AAM42889.1| anti-sigma F factor antagonist [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572253|gb|AAY47663.1| anti-sigma F factor antagonist [Xanthomonas campestris pv. campestris str. 8004] gi|167731754|emb|CAP49934.1| anti-anti-sigma factor [Xanthomonas campestris pv. campestris] Length = 139 Score = 37.1 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 12/110 (10%), Positives = 40/110 (36%), Gaps = 5/110 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---M 59 ++ +G + ++ + + + I + ++DL+ + I + G I Sbjct: 12 QDTRQRVTLSGRLDTHTFHDLDEALSPLLATPIT--TLVLDLADLEYISSAGIRSIFKAR 69 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 + HGK+ + I ++F ++ + + + ++ + Sbjct: 70 KALATRHGKVLVAHPQPQIRKVFDMVKAVPLSDVFASTEELDAYLSTMQR 119 >gi|313664913|ref|YP_004046784.1| efflux ABC transporter, permease protein [Mycoplasma leachii PG50] gi|312949258|gb|ADR23854.1| efflux ABC transporter, permease protein [Mycoplasma leachii PG50] Length = 1798 Score = 37.1 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 58/159 (36%), Gaps = 20/159 (12%) Query: 184 QQGAFQLSQFGAEIFSIDLM---SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK---- 236 Q +Q +F +S++ I + LTA +IA SA+ +G +K Sbjct: 636 IQTFYQEHKFSNSWYSLNWTLYQKIAFWYSLATFLTASLIALV--SALAVFVGVIKSIQA 693 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 +++I ++ G V W+ + +L +A + +++ + I Sbjct: 694 NSKQIGILKANGASSV-----TISWSYVSYAVILVFIAIPLGWMAGTMLQVPFVAIFKDY 748 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIG----IVAMKE 331 F F + + + LI IG +VA+ Sbjct: 749 F--SFQTNVLIYDWLAPLISIIIFGVLIGVFSFLVALFH 785 >gi|170724538|ref|YP_001758564.1| hypothetical protein Swoo_0168 [Shewanella woodyi ATCC 51908] gi|169809885|gb|ACA84469.1| conserved hypothetical protein [Shewanella woodyi ATCC 51908] Length = 98 Score = 37.1 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 19/33 (57%) Query: 36 QSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 Q++ +D S ++ +DT GA+L+ F + + Sbjct: 30 QAEILHIDASQLSRVDTAGAQLLHLFSKTCDAR 62 >gi|291449295|ref|ZP_06588685.1| predicted protein [Streptomyces roseosporus NRRL 15998] gi|291352242|gb|EFE79146.1| predicted protein [Streptomyces roseosporus NRRL 15998] Length = 141 Score = 37.1 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 13/91 (14%), Positives = 35/91 (38%), Gaps = 2/91 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E V +G+ ++ + + ++ S +VDLS + D+ +++ Sbjct: 39 EREALVLSVSGDLDIDSVTPLG--LALSSAADDGSGPVVVDLSGVGFADSTTVNVLLQGH 96 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 +++L S +++L +I + Sbjct: 97 TALGDRLRLAAPSPFMQRLIGMIGLDSALPV 127 >gi|295838820|ref|ZP_06825753.1| STAS domain-containing protein [Streptomyces sp. SPB74] gi|197695366|gb|EDY42299.1| STAS domain-containing protein [Streptomyces sp. SPB74] Length = 112 Score = 37.1 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 35/83 (42%), Gaps = 4/83 (4%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME- 63 G V G+ ++ +DVV A+ + + +D + + D++G +++ Sbjct: 19 GRVVIALIGDLDYDTAEQLGEDVVTALA-TPGVRALALDCAGLEGCDSMGLAVLLQVRRH 77 Query: 64 --KYHGKIKLQGVSTHIEQLFSL 84 + ++ L+ + + +L L Sbjct: 78 TDRAGVRLTLERPTDSLRRLLGL 100 >gi|255646574|gb|ACU23761.1| unknown [Glycine max] Length = 305 Score = 37.1 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 80/243 (32%), Gaps = 28/243 (11%) Query: 38 DSAIVDLSAITEID----TIGAELIMYFM-------EKYHGKIKLQGVSTHIEQLFSLIS 86 D I D T+ ++ + + + G+ ++ S Sbjct: 36 PKVEWDFEGIHYFDNGPLTVQYLFVLDALNFCFWPDKDLNYDDLASGLKAALQNDKSAFD 95 Query: 87 FTHRKKIKNQK-------PQRSFFYNSFKNLHYHIGKKIVK-FINDSCSQAHILGLVISN 138 +K + P+ + L + +G ++ + F + + G N Sbjct: 96 ADRLQKYTGPQLRELLRWPRPLPLEDERVRLLHEVGIELERNFEGKASNLVECCGKSAMN 155 Query: 139 TGEFCASSYK-FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 A + F+ + RQ++ + + L G QG + G+ Sbjct: 156 LVALVARHFPGFRDHTVYKGRQVFLYKRAQIFAADLFGAFRG-----QGYGEFKDIGSLT 210 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE-EIDAIRTMGLDFVRILI 256 D + LR++GVL + +A ++ EIG E E+ A ++ +R LI Sbjct: 211 IMADYIVPAVLRQLGVLKYSPTLASTIEAS--GEIGPGTEEEVELRACSVHAVEKMRELI 268 Query: 257 SPR 259 S + Sbjct: 269 SVK 271 >gi|329934251|ref|ZP_08284330.1| putative anti-sigma factor antagonist [Streptomyces griseoaurantiacus M045] gi|329305847|gb|EGG49702.1| putative anti-sigma factor antagonist [Streptomyces griseoaurantiacus M045] Length = 103 Score = 37.1 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 24/65 (36%), Gaps = 6/65 (9%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +G +G ++A+ + S +VDL+ + +D+ G ++ Sbjct: 12 GPDGTGRLAVSGEIDMSNAGDLAEALDS------GSGPLVVDLTGVEYLDSAGLSVLFAH 65 Query: 62 MEKYH 66 E+ Sbjct: 66 AERLE 70 >gi|238064436|ref|ZP_04609145.1| hypothetical protein MCAG_05402 [Micromonospora sp. ATCC 39149] gi|237886247|gb|EEP75075.1| hypothetical protein MCAG_05402 [Micromonospora sp. ATCC 39149] Length = 115 Score = 37.1 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 15/109 (13%), Positives = 38/109 (34%), Gaps = 6/109 (5%) Query: 2 SENGI-TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +NG+ R AG + E+ + + + +VDL+ +T D+ G + Sbjct: 9 QQNGVGACLRLAGELDTSTAPELNAVLDRLTKRGERH--LLVDLAELTFCDSTGIAAFVR 66 Query: 61 FMEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106 + + +++ G + +E++ L + + Sbjct: 67 GDNQAAARGGWLRVTGATGRVERVLRLTGLAEVLGYQPDTAHPTSQSAP 115 >gi|224054198|ref|XP_002298140.1| sulfate/bicarbonate/oxalate exchanger and transporter sat-1 [Populus trichocarpa] gi|222845398|gb|EEE82945.1| sulfate/bicarbonate/oxalate exchanger and transporter sat-1 [Populus trichocarpa] Length = 699 Score = 37.1 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 14/97 (14%), Positives = 37/97 (38%) Query: 24 ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFS 83 +D + N I+D++A+T IDT G +L+ + + +S + L Sbjct: 577 EEDEWIKANDRSPLKCIILDMTAVTAIDTSGIDLLCELRKMMEKRSLKARLSPNQSHLAL 636 Query: 84 LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 +++ ++ + ++ +G+ + Sbjct: 637 VLANPVGSVMEKLHQSKMLDSFGLNGIYLAVGEAVAD 673 >gi|188587217|ref|YP_001918762.1| polymorphic outer membrane protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351904|gb|ACB86174.1| polymorphic outer membrane protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 863 Score = 37.1 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 7/107 (6%) Query: 271 TILANFSAIIGASIVIWKYYDIPF-AVFFS-RFHSTATLANIFTGLIK-APFMACAIGIV 327 +A I+ + + F VF S + + G+I+ + +GIV Sbjct: 78 AGIAVVVGILFGIFGAYIALKVYFLGVFLSVSLVTGLIALALTRGMIELSVIFGIILGIV 137 Query: 328 AMKEGFAVGVH-SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 A+ V S G + V I+ V ++ I + I I Sbjct: 138 AVYF---VKPSIIISTGISGGSSVAGVIAGVFGLNIALQILLYPITI 181 >gi|159030892|emb|CAO88573.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 782 Score = 37.1 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 33/257 (12%), Positives = 80/257 (31%), Gaps = 10/257 (3%) Query: 57 LIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116 L+ + + + + + Q ++ + G Sbjct: 285 LLAVLEGQTNLIEDREATKEQATKAVEAVDMVMSNAQTGQIIVKAGEKITQAQFVLIDGF 344 Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV--PVVIL- 173 + + + LV S G FC + + L R +G+ P++ + Sbjct: 345 GLSERGINWMGLGSTAILVTSAIGTFCLVAQRLHRPLRH--RDFLLLGLLSFTTPILAIA 402 Query: 174 -ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 I F A + + A + + G ++A +IAG G + A I Sbjct: 403 NIPFTNLAAVGLLVSSFYGPTLAVTQVLLTAGLSLFSIQG--ISADLIAGTIGGLLAAMI 460 Query: 233 GS-MKINEEIDAIRT-MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 + ++ +E+ + +G+ + + + + ++ L + + G S + W Sbjct: 461 AAKLRSRDELSLLGMGIGVSQGGVYLLTYLIVSATASTVIYTLLPTALVYGLSGIAWTVI 520 Query: 291 DIPFAVFFSRFHSTATL 307 + + + R T Sbjct: 521 ALGLSPYLERCFDVVTP 537 >gi|92113597|ref|YP_573525.1| anti-sigma-factor antagonist domain-containing protein [Chromohalobacter salexigens DSM 3043] gi|91796687|gb|ABE58826.1| anti-sigma-factor antagonist (STAS) domain protein [Chromohalobacter salexigens DSM 3043] Length = 171 Score = 37.1 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 11/89 (12%), Positives = 33/89 (37%), Gaps = 5/89 (5%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G+ V + +G+ + D + S + ++DL T +D+ + Sbjct: 13 GVFVLKLSGD-VRLTLCATLDQQAQRVADSPGLAAVMIDLREATNVDSTALGFLAKVAMA 71 Query: 65 YHGKIK----LQGVSTHIEQLFSLISFTH 89 G+++ + + ++ ++ F+ Sbjct: 72 VEGRLEQPPTIVAEHPDVRRMLDVMGFSR 100 >gi|224825147|ref|ZP_03698253.1| anti-sigma-factor antagonist [Lutiella nitroferrum 2002] gi|224602818|gb|EEG08995.1| anti-sigma-factor antagonist [Lutiella nitroferrum 2002] Length = 105 Score = 37.1 bits (85), Expect = 4.7, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 29/69 (42%) Query: 19 EISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHI 78 I + ++ D +DLSA+ EIDT G +L++ + + K + H Sbjct: 19 TIYNATAQKQLLLDALQAGDGLELDLSAVAEIDTAGFQLLLLAKREARHQDKPLLIVAHS 78 Query: 79 EQLFSLISF 87 + ++ F Sbjct: 79 PAVREVVDF 87 >gi|330466666|ref|YP_004404409.1| sulfate transporter family protein [Verrucosispora maris AB-18-032] gi|328809637|gb|AEB43809.1| sulfate transporter family protein [Verrucosispora maris AB-18-032] Length = 587 Score = 37.1 bits (85), Expect = 4.7, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 34/81 (41%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 V R G ++D ++ + + ++D SAIT+IDT GA + E+ G Sbjct: 461 VVRVDGTLYFANAQRLSDQLLTMAGQRTGLAAIVLDASAITDIDTDGATALAELRERLAG 520 Query: 68 KIKLQGVSTHIEQLFSLISFT 88 + ++T + L+ Sbjct: 521 HDVVLHLATVRGPVRDLLDRA 541 >gi|205373762|ref|ZP_03226564.1| anti-sigma F factor antagonist (stage II sporulation protein AA) [Bacillus coahuilensis m4-4] Length = 121 Score = 37.1 bits (85), Expect = 4.7, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 45/105 (42%), Gaps = 4/105 (3%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62 + V R G E+ + I Q +++L ++ +D+ G +I+ + Sbjct: 16 VMVIRLQGELDHHAAEELREKASNMIQ-DYQVKHIVLNLKQLSFMDSSGLGVILGRYKEI 74 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF 107 ++++G++ + VS ++++F L ++ + + +F Sbjct: 75 KQHNGEMVVCEVSPAVKRIFELSGLFKIVHLEATEEEALNRLGAF 119 >gi|71906372|ref|YP_283959.1| Sulfate transporter/antisigma-factor antagonist STAS [Dechloromonas aromatica RCB] gi|71845993|gb|AAZ45489.1| Sulfate transporter/antisigma-factor antagonist STAS [Dechloromonas aromatica RCB] Length = 101 Score = 37.1 bits (85), Expect = 4.7, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 37/90 (41%), Gaps = 4/90 (4%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 ++E G V + G + + S +VD S + +D+ +++ Sbjct: 6 LNEAGKAVIKLVGRFD-FNTHREFRGSYEPLVSDTSVRSVVVDFSGVDYLDSSALGMLLM 64 Query: 61 FMEKYHG---KIKLQGVSTHIEQLFSLISF 87 +K G ++ L GV +++Q+ + +F Sbjct: 65 LRDKLGGANKEVALTGVRGNVKQVLDIANF 94 >gi|46201619|ref|ZP_00208177.1| COG1502: Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes [Magnetospirillum magnetotacticum MS-1] Length = 514 Score = 37.1 bits (85), Expect = 4.7, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 78/218 (35%), Gaps = 45/218 (20%) Query: 24 ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIE---- 79 ++ +SI + I D D +GA ++ + ++++ + E Sbjct: 71 RAALIDRAERSIDFQTFIFDA------DEVGAFILDRLIAAARRGVRVRILLDDYELGLD 124 Query: 80 -QLFSLISFTHRKKIK--NQKPQRSFFYNSFKNL--HYHIGKKIVKFINDSCSQAHILGL 134 L + + +++ N P R+ + S + L +G+++ + + Q +LG Sbjct: 125 DGLLARLDGEPNMEVRIFNPFPDRARWTRSAQMLWNLDRLGRRMHNKVLVADGQLALLG- 183 Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 G S++ F+G S R + +T +A Q A F Sbjct: 184 -----GRNI-SNHYFEGPSESNFRDIE--------------LLTTGAVATQAAASFDSFW 223 Query: 195 AEIFSIDLMSILQLREIGVLLTAV-----MIAGRSGSA 227 A ++ + RE A+ ++AG SG A Sbjct: 224 ASPMVGEVRAFD--RE--PDAEALDTLLSLLAGASGPA 257 >gi|295104209|emb|CBL01753.1| S-adenosyl-methyltransferase MraW [Faecalibacterium prausnitzii SL3/3] Length = 321 Score = 37.1 bits (85), Expect = 4.8, Method: Composition-based stats. Identities = 37/253 (14%), Positives = 79/253 (31%), Gaps = 52/253 (20%) Query: 40 AIVDLSAITEID-TIGA-----ELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 +D + T +D T G ++ + G++ ++Q + + Sbjct: 28 LAIDPAG-TYLDGTAGGAGHSRQIALRLDAAKGGRL------ISLDQDPDAVQTARSRLA 80 Query: 94 KNQKPQRSFFYNSFKNLHYHIG-KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGF 152 + +G +KI + D +H L + + Sbjct: 81 GLPATVVQINFRYAGQALEQLGIEKINGALLDLGVSSHQLDDAARGFSYRADAPLDMR-- 138 Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS-ILQLREI 211 M G + + + ++ A L +G E ++ + I++ RE Sbjct: 139 -------MSQQGETA-------ADLVNTESREELARILRDYGEEPYAWQIAGKIVETRET 184 Query: 212 GVLLTAVMIAGRSGSAI-----------------VAEIGSMKINEEIDAIRTMGLDFVRI 254 +LT + +A SA+ I +N E+DA+ GLD + Sbjct: 185 APILTTLQLADIVASAMPPAERRKNKNPSRRTFQALRIA---VNHELDALEE-GLDTIFD 240 Query: 255 LISPRIWALIISL 267 ++P +I+ Sbjct: 241 HLAPGGRLCVITF 253 >gi|325928342|ref|ZP_08189538.1| anti-anti-sigma factor [Xanthomonas perforans 91-118] gi|325541276|gb|EGD12822.1| anti-anti-sigma factor [Xanthomonas perforans 91-118] Length = 139 Score = 37.1 bits (85), Expect = 4.8, Method: Composition-based stats. Identities = 13/110 (11%), Positives = 37/110 (33%), Gaps = 5/110 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---M 59 ++ G + ++ + + I + ++DLSA+ I + G I Sbjct: 12 QDTRQRVTLTGRLDTHTYQDLDAALSPLLGTRIT--TLVLDLSALEYISSAGIRCIFKAR 69 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 + GK+ + I ++F ++ + + + + + Sbjct: 70 KALATRQGKVLVSNPQPQIRKVFDMVKAVPLSDVFASTEELDAYLAAMQR 119 >gi|254294007|ref|YP_003060030.1| hypothetical protein Hbal_1645 [Hirschia baltica ATCC 49814] gi|254042538|gb|ACT59333.1| hypothetical protein Hbal_1645 [Hirschia baltica ATCC 49814] Length = 181 Score = 37.1 bits (85), Expect = 4.8, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 20/54 (37%), Gaps = 11/54 (20%) Query: 320 MACAIGIV-----AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 A +GI+ G+ VG G + S +V ++ ++ +Y Sbjct: 129 FAILVGIITGTASGAYNGYKVGGVP---GAATGSA---SGFVVAVLGAVLTGWY 176 >gi|302393818|sp|Q04561|RPOA_PRRSL RecName: Full=Replicase polyprotein 1ab; AltName: Full=ORF1ab polyprotein; Contains: RecName: Full=Nsp1-alpha papain-like cysteine proteinase; AltName: Full=PCP1-alpha; Contains: RecName: Full=Nsp1-beta papain-like cysteine proteinase; AltName: Full=PCP1-beta; Contains: RecName: Full=Nsp2 cysteine proteinase; AltName: Full=CP2; Short=CP; Contains: RecName: Full=Non-structural protein 3; Short=Nsp3; Contains: RecName: Full=3C-like serine proteinase; Short=3CLSP; AltName: Full=Nsp4; Contains: RecName: Full=Non-structural protein 5-6-7; Short=Nsp5-6-7; Contains: RecName: Full=Non-structural protein 8; Short=Nsp8; Contains: RecName: Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp; AltName: Full=Nsp9; Contains: RecName: Full=Helicase; Short=Hel; AltName: Full=Nsp10; Contains: RecName: Full=Non-structural protein 11; Short=Nsp11; Contains: RecName: Full=Non-structural protein 12; Short=Nsp12 Length = 3855 Score = 37.1 bits (85), Expect = 4.9, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 64/161 (39%), Gaps = 20/161 (12%) Query: 133 GLVISNTGEFCASSYKFKGF-LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 GL ++ G ++ +++ +P V++ + A + Sbjct: 1898 GLSTVQLLCVFFLLWRMMGHAWTPIVAVGFFLLNEILPAVLVRAVF---SFALFVLAWAT 1954 Query: 192 QFGAEIFSIDLMSILQLR-EIGVLLTAVMIAGRSGSAIVAEIGSM--KINEEIDAIRTMG 248 + A++ I L++ R ++ + A+ G G + AEIG+ +++E A+ T Sbjct: 1955 PWSAQVLMIRLLTASLNRNKLSLAFYAL--GGVVG--LAAEIGTFAGRLSELSQALST-- 2008 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 PR+ A+ +P TI+ +G + ++KY Sbjct: 2009 -----YCFLPRVLAMTSCVP--TIIIGGLHTLGVILWLFKY 2042 >gi|290985539|ref|XP_002675483.1| predicted protein [Naegleria gruberi] gi|284089079|gb|EFC42739.1| predicted protein [Naegleria gruberi] Length = 850 Score = 37.1 bits (85), Expect = 5.0, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 36/95 (37%), Gaps = 14/95 (14%) Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV-IWKYYDIPFAV----F 297 A+ MG+ + I+ ++ + + +IG I I + + F V F Sbjct: 242 AMIMMGMKESAY-----FLSWFITFLIICAVFSLVNVIGGMIFQISIFLNTDFIVLYVLF 296 Query: 298 FSRFHSTATLANIFTGLIK----APFMACAIGIVA 328 FS S LA + + IK A + + ++ Sbjct: 297 FSFTFSLICLAFLLSTFIKESKSALVLGFTVLAIS 331 >gi|256392581|ref|YP_003114145.1| anti-sigma-factor antagonist [Catenulispora acidiphila DSM 44928] gi|256358807|gb|ACU72304.1| anti-sigma-factor antagonist [Catenulispora acidiphila DSM 44928] Length = 115 Score = 37.1 bits (85), Expect = 5.0, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 34/84 (40%), Gaps = 3/84 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G V AG+ + +V A + S ++D S IT +D++G ++++ ++ Sbjct: 12 GRVVLAVAGDVDLAAHTRFEAEVEQAWDGSTD---LVIDCSGITFLDSMGLRVLVHTKQR 68 Query: 65 YHGKIKLQGVSTHIEQLFSLISFT 88 ++ + + ++ Sbjct: 69 ADETGHSVVLAAPSDPVLRVLDLA 92 >gi|297564180|ref|YP_003683153.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848629|gb|ADH70647.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 118 Score = 36.8 bits (84), Expect = 5.0, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 37/86 (43%), Gaps = 5/86 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S+ + V G ++ D+++ A+ + +VD+S + D+ G +++ Sbjct: 9 SQQDVAVVTVGGEIDLYTAPQLRDELIGALEDGARR--LVVDMSRVEFCDSTGISVLLSA 66 Query: 62 MEKYH---GKIKLQGVSTHIEQLFSL 84 M++ G ++L + ++ + Sbjct: 67 MKRSRDKDGDLELVAPRPAVTKVLEV 92 >gi|282865602|ref|ZP_06274653.1| anti-sigma-factor antagonist [Streptomyces sp. ACTE] gi|282559646|gb|EFB65197.1| anti-sigma-factor antagonist [Streptomyces sp. ACTE] Length = 128 Score = 36.8 bits (84), Expect = 5.0, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 25/73 (34%), Gaps = 1/73 (1%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG-AELIMYFME 63 G R G+ E+A + + +D + + D++G A L++ Sbjct: 18 GTARLRLTGDLDYDTSGELARAAEECLAADPRLADLHLDCAQLRLCDSMGVATLLLIHRG 77 Query: 64 KYHGKIKLQGVST 76 ++L S Sbjct: 78 TTARGVRLHVESP 90 >gi|169595514|ref|XP_001791181.1| hypothetical protein SNOG_00497 [Phaeosphaeria nodorum SN15] gi|160701110|gb|EAT91992.2| hypothetical protein SNOG_00497 [Phaeosphaeria nodorum SN15] Length = 1088 Score = 36.8 bits (84), Expect = 5.0, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 31/83 (37%), Gaps = 8/83 (9%) Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT----GLIKAPFMACAIGI 326 TI+ N + G S+ Y A +F + A+ NIF GL+ + A +G Sbjct: 260 TIIGNRISFFGLSLAAAITYGGGAADYFVYYPEHASAWNIFGMTLAGLVCSFTFAFVLG- 318 Query: 327 VAMKEGFAVGVHSN---SLGKKV 346 + + G + + + Sbjct: 319 IGLACGMVMRPDWEAAYGVSQGA 341 >gi|153003877|ref|YP_001378202.1| hypothetical protein Anae109_1009 [Anaeromyxobacter sp. Fw109-5] gi|152027450|gb|ABS25218.1| hypothetical protein Anae109_1009 [Anaeromyxobacter sp. Fw109-5] Length = 109 Score = 36.8 bits (84), Expect = 5.0, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 36/82 (43%), Gaps = 5/82 (6%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +E G TV R +G + +E+A + + ++D S + E +G + + Sbjct: 11 TEGGRTVIRLSGVFDHASAAELAQRLQQE-----AATEVVLDFSLVREFADLGVAALAHG 65 Query: 62 MEKYHGKIKLQGVSTHIEQLFS 83 + ++ ++G+ H ++F Sbjct: 66 LAGGRQRLLMRGLRQHQLRIFR 87 >gi|269960376|ref|ZP_06174750.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269834987|gb|EEZ89072.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 106 Score = 36.8 bits (84), Expect = 5.0, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 10/82 (12%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLS--AITEIDTIGAELIMYFME-- 63 + + G + + A+ + Q ++ S I ID+ G ++++ +E Sbjct: 14 ILKLTGALDRDTVPALW-----AVAQQWQPSQTELECSLQEIERIDSAGMVMLIHLLEHA 68 Query: 64 -KYHGKIKLQGVSTHIEQLFSL 84 K + I L V + LF L Sbjct: 69 KKQNCHIMLSFVPAQLRTLFQL 90 >gi|284044887|ref|YP_003395227.1| anti-sigma-factor antagonist [Conexibacter woesei DSM 14684] gi|283949108|gb|ADB51852.1| anti-sigma-factor antagonist [Conexibacter woesei DSM 14684] Length = 114 Score = 36.8 bits (84), Expect = 5.1, Method: Composition-based stats. Identities = 12/94 (12%), Positives = 35/94 (37%), Gaps = 7/94 (7%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 V +G + ++A A+ + ++DL ++ +D+ G L++ Sbjct: 17 RGETLVATPSGELDVATVPQLA----AALREHDGFARLLIDLRPLSFMDSSGLRLLVAEH 72 Query: 63 EKYHG---KIKLQGVSTHIEQLFSLISFTHRKKI 93 ++ ++ L +++L + R + Sbjct: 73 DRAQRGGYELALVRGGAEVDRLLRVTRLDERLPL 106 >gi|293115756|ref|ZP_06604589.1| anti-sigma F factor antagonist [Butyrivibrio crossotus DSM 2876] gi|292808406|gb|EFF67611.1| anti-sigma F factor antagonist [Butyrivibrio crossotus DSM 2876] Length = 128 Score = 36.8 bits (84), Expect = 5.1, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 37/83 (44%), Gaps = 4/83 (4%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YF 61 GI + G+ I D++ IN + + + ++ +D+ G L+M Sbjct: 21 GILIVNLGGDLDHHVTEMIRDEIDRKINGQ-KVHTITFNFRNVSFMDSAGIGLLMGRYRK 79 Query: 62 MEKYHGKIKLQGVSTHIEQLFSL 84 +++ G+I + + ++++F + Sbjct: 80 IKEIGGEIYVSNIGQGVQRIFRM 102 >gi|182436852|ref|YP_001824571.1| putative anti-sigma factor antagonist [Streptomyces griseus subsp. griseus NBRC 13350] gi|178465368|dbj|BAG19888.1| putative anti-sigma factor antagonist [Streptomyces griseus subsp. griseus NBRC 13350] Length = 151 Score = 36.8 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 6/75 (8%) Query: 2 SENGI-TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM- 59 +E G TV R +G + V A+ + ++DLS + D+ G +++ Sbjct: 35 AEQGSWTVLRMSGELDLVTSPVVRQSVHEAVAE--GQHDVVLDLSEVFFCDSSGVGVLIA 92 Query: 60 --YFMEKYHGKIKLQ 72 M+ G+++L Sbjct: 93 SRRLMKSCGGRLRLV 107 >gi|210077436|gb|ACJ06987.1| replicase polyprotein 1a [Porcine reproductive and respiratory syndrome virus] Length = 2376 Score = 36.8 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 58/144 (40%), Gaps = 18/144 (12%) Query: 133 GLVISNTGEFCASSYKFKGF-LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 GL ++ G ++ +Y+ +P V++ + A + Sbjct: 1878 GLSTVQLLCVFFLLWRMMGHAWTPIVAVGFYMLNEILPAVLVRAVF---SFALFDLAWAT 1934 Query: 192 QFGAEIFSIDLMSILQLR-EIGVLLTAVMIAGRSGSAIVAEIGSM--KINEEIDAIRTMG 248 + A++ I L++ R ++ ++ A+ G G + AEIG+ +++E A+ T Sbjct: 1935 PWSAQVLMIRLLTAALTRNKLSLVFYAL--GGVVG--LAAEIGTFAGRLSELSQALST-- 1988 Query: 249 LDFVRILISPRIWALIISLPLLTI 272 PR+ A+ +P++ I Sbjct: 1989 -----YCFLPRVLAMTSCVPIIII 2007 >gi|289642188|ref|ZP_06474339.1| anti-sigma-factor antagonist [Frankia symbiont of Datisca glomerata] gi|289508034|gb|EFD28982.1| anti-sigma-factor antagonist [Frankia symbiont of Datisca glomerata] Length = 128 Score = 36.8 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 45/105 (42%), Gaps = 5/105 (4%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK--- 64 V R G+ + + + ++ A + +VDL+ ++ +D+ G +I++ ++ Sbjct: 16 VVRPIGDVDYSSLEPLREALLDA--RIAGVRDIVVDLAEVSFMDSQGLAVILFAHQRQRS 73 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 G++ L+ S I +L + + H +++ QR Sbjct: 74 VGGRLILRSPSEEIARLLCVTNVAHVIDVESGNSQRDPAAPRAGG 118 >gi|254000414|ref|YP_003052477.1| anti-sigma-factor antagonist [Methylovorus sp. SIP3-4] gi|253987093|gb|ACT51950.1| anti-sigma-factor antagonist [Methylovorus sp. SIP3-4] Length = 106 Score = 36.8 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 3/73 (4%) Query: 19 EISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EKYHGKIKLQGVS 75 I E A+ + Q + +DL+ +TEIDT G +L++ ++ + + G S Sbjct: 21 TIFEAAEYHAALLPPVTQCHTLELDLTNVTEIDTSGLQLLVSAKLRSQQTGSTLSITGHS 80 Query: 76 THIEQLFSLISFT 88 ++Q+ Sbjct: 81 ETVQQVLDATDLA 93 >gi|114321368|ref|YP_743051.1| anti-sigma-factor antagonist [Alkalilimnicola ehrlichii MLHE-1] gi|114227762|gb|ABI57561.1| anti-sigma-factor antagonist [Alkalilimnicola ehrlichii MLHE-1] Length = 109 Score = 36.8 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 13/93 (13%), Positives = 32/93 (34%), Gaps = 3/93 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 F+ +G+ + + + S +DL A+ D+ G L++ + Sbjct: 20 FQLSGDLSFETVPGLWAEAERLFR---GSGDVELDLGAVARTDSAGLALLVALTRRAAQH 76 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 + EQL ++ + P+++ Sbjct: 77 DQAIRFCHFPEQLRAMARLSGLADFLQLAPEKA 109 >gi|260574473|ref|ZP_05842477.1| anti-sigma-factor antagonist [Rhodobacter sp. SW2] gi|259023369|gb|EEW26661.1| anti-sigma-factor antagonist [Rhodobacter sp. SW2] Length = 115 Score = 36.8 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 39/101 (38%), Gaps = 3/101 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + + G+ + I M + ++DLS ++ +D+ G ++ Sbjct: 7 QRGDLLIVTAMGD-RIDAAGAIQFKDRMREITEAPTRRVLLDLSRVSFLDSSGLGAVVAV 65 Query: 62 MEKYH--GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100 M+ K++L G++ ++++F L I P R Sbjct: 66 MKALGPDRKLELAGLTPTVQKVFRLTRMDSVFTIHPAVPDR 106 >gi|297568250|ref|YP_003689594.1| aminopeptidase N [Desulfurivibrio alkaliphilus AHT2] gi|296924165|gb|ADH84975.1| aminopeptidase N [Desulfurivibrio alkaliphilus AHT2] Length = 967 Score = 36.8 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 30/208 (14%), Positives = 66/208 (31%), Gaps = 26/208 (12%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G + AG W++ E ++ V + + L + D A L++ Sbjct: 606 SGSLILELAGRWQAREYLQLPGGFVDTYRQLLAR------LPGLE--DKSFAALLVALPT 657 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK--- 120 + + ++ + +E L + F R+ +P+ Y SF G+ Sbjct: 658 EEYLAEQMALI--DVEALHTAREFVRRELAVALRPRWEEIYRSF--PVATEGEGTYDPRL 713 Query: 121 -FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 +QA L +++ E A + +Q + G + L V Sbjct: 714 AGGRRLRNQALFFLLALADDRELIALAR----------QQFFQAGNMTDSLAALRGLVHA 763 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 A +++Q + + + Sbjct: 764 AAVSEQPHRIFGRSARLTYLGYAAPVCL 791 >gi|330960754|gb|EGH61014.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. maculicola str. ES4326] Length = 96 Score = 36.8 bits (84), Expect = 5.5, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 6/87 (6%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--- 58 + + + G ++E+A ++ I + + VDLS +TE+D G +L+ Sbjct: 7 TTDDPARVQIDGELTIYTVTELAARILPQIGSAAR---MEVDLSHVTEMDGAGLQLLAVI 63 Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLI 85 EK + + G S + + F L Sbjct: 64 QREAEKAGTALHMTGQSKAVTETFELC 90 >gi|296087331|emb|CBI33705.3| unnamed protein product [Vitis vinifera] Length = 306 Score = 36.8 bits (84), Expect = 5.5, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 91/281 (32%), Gaps = 46/281 (16%) Query: 9 FRFAGNWKSPEISEIA------DDVVMAINKSIQSDSAIVDLSAITEID----TIGAELI 58 R + W + + + + V I SI D I D T+ + Sbjct: 4 VRASSAWVAARSAHVVVDSSGIEKAVEEIQDSI--PKVKWDFEGIHYFDNGPLTVQYLFV 61 Query: 59 MYFMEK-YHGKIKLQ------GVSTHIEQLFSLISFTHRKKIKNQK-------PQRSFFY 104 + + + L G+ ++ S+ +KI + P+ Sbjct: 62 LDALNFCFWPDKDLSYDHLALGLKEALQNDKSVFDSDRLQKITGPQLRELLKWPRPLPLE 121 Query: 105 NSFKNLHYHIGKKIVKFINDSCS-QAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYY 162 N L + +G ++ + S G +N + F+ + Q++ Sbjct: 122 NERVRLLHEVGLELERSFEGKASKLVESCGKSAANLVALVTRHFPGFRDHSVYKGHQVFL 181 Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL-----LTA 217 + + L G QG + + + D + LR++GVL L + Sbjct: 182 YKRAQIFAADLWGAFEG-----QGYGEFNDISSITIFADYIVPAVLRQLGVLRYSSDLAS 236 Query: 218 VMIAGRSGSAIVAEIGSMKINE-EIDAIRTMGLDFVRILIS 257 ++ A R EIGS E E+ A ++ +R L+S Sbjct: 237 IIEANR-------EIGSGSEEEVELRACSIYAVEKMRELLS 270 >gi|91791864|ref|YP_561515.1| SpoIIAA family protein [Shewanella denitrificans OS217] gi|91713866|gb|ABE53792.1| SpoIIAA family protein [Shewanella denitrificans OS217] Length = 98 Score = 36.8 bits (84), Expect = 5.5, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 27/70 (38%), Gaps = 7/70 (10%) Query: 26 DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME-------KYHGKIKLQGVSTHI 78 ++ K SD+ +D+S IT +D+ G L++ K L S H+ Sbjct: 24 ELWPKRRKLFNSDTQALDVSGITYVDSAGVALLLELARLSHKGSPKRKMPRMLTNPSKHL 83 Query: 79 EQLFSLISFT 88 ++ L Sbjct: 84 SKMIELYDLE 93 >gi|302538106|ref|ZP_07290448.1| anti-sigma factor antagonist [Streptomyces sp. C] gi|302447001|gb|EFL18817.1| anti-sigma factor antagonist [Streptomyces sp. C] Length = 121 Score = 36.8 bits (84), Expect = 5.6, Method: Composition-based stats. Identities = 11/84 (13%), Positives = 37/84 (44%), Gaps = 6/84 (7%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY--- 60 +G + G + + + + A + +VD++ + D+ G +++ Sbjct: 18 DGAVLLTLGGELDHDTAAPLKEALDAAARR---GGRLLVDMAGLRFCDSTGLNALLHGRL 74 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSL 84 +++ G ++L G++ + ++F + Sbjct: 75 AVQEAGGSLELAGLTGPVARMFRI 98 >gi|195386206|ref|XP_002051795.1| GJ17189 [Drosophila virilis] gi|194148252|gb|EDW63950.1| GJ17189 [Drosophila virilis] Length = 466 Score = 36.8 bits (84), Expect = 5.6, Method: Composition-based stats. Identities = 15/121 (12%), Positives = 46/121 (38%), Gaps = 2/121 (1%) Query: 255 LISPRIWALIISLPLLTILA-NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 + S +I +S + + +I ++ V F +++ F+ + + Sbjct: 313 IGSVQILGAYVSTIVCDVFGRKILMLISSAGVALCLTVFGFFTYYAGFYDMTEWSWVPVA 372 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSL-GKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 ++ IG+++ V + + + + +V S+V ++ ++F + G Sbjct: 373 IMSLDIFLGNIGLISCLFVLMVEMFPLKIRARATSIAIVICSSLVFLMLNIFPLCMANWG 432 Query: 373 I 373 + Sbjct: 433 L 433 >gi|291435469|ref|ZP_06574859.1| anti-sigma factor antagonist [Streptomyces ghanaensis ATCC 14672] gi|291338364|gb|EFE65320.1| anti-sigma factor antagonist [Streptomyces ghanaensis ATCC 14672] Length = 181 Score = 36.8 bits (84), Expect = 5.7, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 29/91 (31%), Gaps = 5/91 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + G TV F G EI + A ++DL+ + D G L+ Sbjct: 71 QDRGHTVLEFRGEIDIAAAEEIVPHLDAATAA--PDARIVIDLTRVEFFDCSGLRLLFRA 128 Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLISFTH 89 + HG++ L ++ + Sbjct: 129 RHRVLAGHGRLHLVCAHPLTLRMLRITDLAR 159 >gi|156975888|ref|YP_001446795.1| hypothetical protein VIBHAR_03654 [Vibrio harveyi ATCC BAA-1116] gi|156527482|gb|ABU72568.1| hypothetical protein VIBHAR_03654 [Vibrio harveyi ATCC BAA-1116] Length = 106 Score = 36.8 bits (84), Expect = 5.7, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 6/80 (7%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---K 64 + + G + + + + + + L I ID+ G ++++ +E K Sbjct: 14 ILKLTGALDRDSVPALWAVAQQWLPSQTELECS---LEEIERIDSAGMVMLIHLLEHAKK 70 Query: 65 YHGKIKLQGVSTHIEQLFSL 84 + I L V + LF L Sbjct: 71 QNCHIMLSFVPAQLRTLFQL 90 >gi|126347595|emb|CAJ89307.1| putative anti-sigma factor antagonist [Streptomyces ambofaciens ATCC 23877] Length = 160 Score = 36.8 bits (84), Expect = 5.7, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 31/81 (38%), Gaps = 5/81 (6%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAEL---IMYF 61 G+ + AG+ + + + I + ++DLS + D+ G + + Sbjct: 15 GLAIATVAGDVDTRTADTLRREASEIIQQ--GCPRLVLDLSGVRFCDSAGLSALIGLWHA 72 Query: 62 MEKYHGKIKLQGVSTHIEQLF 82 + G ++L V + ++ Sbjct: 73 AQAAGGALRLADVPDRLMRML 93 >gi|283852491|ref|ZP_06369759.1| anti-sigma-factor antagonist [Desulfovibrio sp. FW1012B] gi|283572099|gb|EFC20091.1| anti-sigma-factor antagonist [Desulfovibrio sp. FW1012B] Length = 111 Score = 36.8 bits (84), Expect = 5.8, Method: Composition-based stats. Identities = 12/82 (14%), Positives = 38/82 (46%), Gaps = 5/82 (6%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEKY 65 AG + + ++ + ++ + + +D++ ++ ID+ G L++ + + Sbjct: 23 VTLAGEIDFSVTPAVRERLLALVGETPE--TITLDMADLSYIDSSGLALLIELRKHLAES 80 Query: 66 HGKIKLQGVSTHIEQLFSLISF 87 K+ ++ +S + +LF+L Sbjct: 81 GRKVAIRSLSPQVRKLFNLTQL 102 >gi|330468640|ref|YP_004406383.1| anti-anti-sigma factor [Verrucosispora maris AB-18-032] gi|328811611|gb|AEB45783.1| anti-anti-sigma factor [Verrucosispora maris AB-18-032] Length = 117 Score = 36.8 bits (84), Expect = 5.8, Method: Composition-based stats. Identities = 13/105 (12%), Positives = 35/105 (33%), Gaps = 5/105 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G R AG E+ + + + ++DL+ +T D+ G + + Sbjct: 13 GGPARLRLAGELDMSSAPELNEAIDRLAAAGQRR--LLIDLAELTFCDSTGIAVFVRGDN 70 Query: 64 KYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105 + + +++ G + +E++ + + P Sbjct: 71 RAAEQGGWLRITGATGRVERVLKVTGLADVLGYGSADPGPDDRVG 115 >gi|257057452|ref|YP_003135284.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Saccharomonospora viridis DSM 43017] gi|256587324|gb|ACU98457.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Saccharomonospora viridis DSM 43017] Length = 105 Score = 36.8 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 10/58 (17%), Positives = 25/58 (43%), Gaps = 2/58 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 R +G + + + +I+ + + +DLS ++ ID+ G ++ E+ Sbjct: 17 IRLSGEIDLSNSDAVREKIFASISNHLVA--VTLDLSEVSYIDSAGLRVLFALTERLR 72 >gi|126308814|ref|XP_001378941.1| PREDICTED: similar to ABCA8 protein [Monodelphis domestica] Length = 1631 Score = 36.8 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 4/91 (4%) Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MGL +S W L+ + +L + + + +VI Y + F +F S Sbjct: 255 MTMMGLQSSAFWLS---WGLLYAGYILIMATFLALVTSTHLVIMTGYFVLFTLFLLYGLS 311 Query: 304 TATLANIFTGLI-KAPFMACAIGIVAMKEGF 333 A + LI K ++++ G Sbjct: 312 LVAFAFLLCVLIKKPLLTGLIAFLLSVFWGC 342 >gi|311893945|dbj|BAJ26353.1| putative antagonist protein [Kitasatospora setae KM-6054] Length = 111 Score = 36.8 bits (84), Expect = 6.0, Method: Composition-based stats. Identities = 13/93 (13%), Positives = 28/93 (30%), Gaps = 3/93 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---K 64 R G E+ V + VD +A++ D++G ++ Sbjct: 19 TVRVEGELDHESCEELVRAVAAHLAAQPPYQVVRVDCAAMSLCDSMGLSALLQIRRDTDA 78 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97 ++ L+ H+++L L Sbjct: 79 AGRRLLLEHRPAHLDRLLRLTGTAAYLLADRAP 111 >gi|167947402|ref|ZP_02534476.1| hypothetical protein Epers_13022 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 43 Score = 36.8 bits (84), Expect = 6.0, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 19/36 (52%) Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 V +++PR W IS+PLL L + +IG V Sbjct: 1 PVHRILTPRFWGGFISMPLLAGLFSAVGVIGGYFVG 36 >gi|153834585|ref|ZP_01987252.1| YrbB protein [Vibrio harveyi HY01] gi|148869028|gb|EDL68073.1| YrbB protein [Vibrio harveyi HY01] Length = 106 Score = 36.8 bits (84), Expect = 6.0, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 10/82 (12%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLS--AITEIDTIGAELIMYFME-- 63 + + G + + A+ + Q ++ S I ID+ G ++++ +E Sbjct: 14 ILKLTGALDRDSVPALW-----AVAQQWQPSQTELECSLEEIERIDSAGMVMLIHLLEHA 68 Query: 64 -KYHGKIKLQGVSTHIEQLFSL 84 K + I L V + LF L Sbjct: 69 KKQNCHIMLSFVPAQLRTLFQL 90 >gi|52841081|ref|YP_094880.1| hypothetical protein lpg0845 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54296866|ref|YP_123235.1| hypothetical protein lpp0907 [Legionella pneumophila str. Paris] gi|52628192|gb|AAU26933.1| hypothetical protein lpg0845 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53750651|emb|CAH12058.1| hypothetical protein lpp0907 [Legionella pneumophila str. Paris] Length = 93 Score = 36.8 bits (84), Expect = 6.1, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 29/71 (40%), Gaps = 4/71 (5%) Query: 16 KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEKYHGKIKLQ 72 + + D + A+ + + +DLS +T D+ G LI+ ++ + + Sbjct: 13 TFKSVVSVRDKLYKALMEDTRGRFC-LDLSEVTHCDSAGLALIIEARKLCKQNNKVFDVI 71 Query: 73 GVSTHIEQLFS 83 G+S + L Sbjct: 72 GISPETQSLAE 82 >gi|291438981|ref|ZP_06578371.1| anti sigma factor [Streptomyces ghanaensis ATCC 14672] gi|291341876|gb|EFE68832.1| anti sigma factor [Streptomyces ghanaensis ATCC 14672] Length = 124 Score = 36.8 bits (84), Expect = 6.2, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 5/73 (6%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59 + G V R +G S + V A+ S ++DLS + D+ G +++ Sbjct: 9 EQGGWAVLRVSGELDLLTSSVLRQRVHDAVAD--GRHSLVLDLSDVWFCDSSGVGVLIAA 66 Query: 60 -YFMEKYHGKIKL 71 + G ++L Sbjct: 67 RRLLRSCQGTLRL 79 >gi|330432400|gb|AEC17459.1| anti-anti-sigma factor [Gallibacterium anatis UMN179] Length = 113 Score = 36.8 bits (84), Expect = 6.2, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 2/76 (2%) Query: 16 KSPEISEIADDVVMAINKSIQS-DSAIVDLSAITEIDTIG-AELIMYFMEKYHGKIKLQG 73 P++ + + N +QS + DL I+ ID+ G A L + K++L Sbjct: 29 TVPQLWQQRQQFSLKENAELQSCQQLVWDLQQISHIDSAGFALLTELLLLNPAEKVRLIN 88 Query: 74 VSTHIEQLFSLISFTH 89 + + L +L S Sbjct: 89 LPEQCKNLAALFSLDQ 104 >gi|315501610|ref|YP_004080497.1| anti-sigma-factor antagonist [Micromonospora sp. L5] gi|315408229|gb|ADU06346.1| anti-sigma-factor antagonist [Micromonospora sp. L5] Length = 117 Score = 36.8 bits (84), Expect = 6.2, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 36/87 (41%), Gaps = 5/87 (5%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62 TV AG+ ++ D + + +VDL+ + +D+ G ++ + Sbjct: 14 GTVIEVAGDLDMSTTPQLRDRLYELTEA--GARVVVVDLAGVGFMDSSGLGALVVGYKSL 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTH 89 + G + L GV + ++FS+ S Sbjct: 72 RERDGWLGLAGVRASVRRVFSITSVDR 98 >gi|282860687|ref|ZP_06269753.1| anti-sigma-factor antagonist [Streptomyces sp. ACTE] gi|282564423|gb|EFB69959.1| anti-sigma-factor antagonist [Streptomyces sp. ACTE] Length = 124 Score = 36.8 bits (84), Expect = 6.2, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 29/73 (39%), Gaps = 5/73 (6%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59 + TV R G + V A+ + ++DLS + D+ G +++ Sbjct: 9 EQGAWTVLRIRGELDLASAPAVRQSVHGAVAE--GRHDVVLDLSGVFFCDSSGVNVLIAT 66 Query: 60 -YFMEKYHGKIKL 71 M+ G+++L Sbjct: 67 RRLMKSCGGRLRL 79 >gi|221134180|ref|ZP_03560485.1| putative anti-sigma F factor antagonist [Glaciecola sp. HTCC2999] Length = 108 Score = 36.8 bits (84), Expect = 6.2, Method: Composition-based stats. Identities = 12/86 (13%), Positives = 33/86 (38%), Gaps = 4/86 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + G+ + + + V + +S +DL + ID+ G L+++ + Sbjct: 9 DNKLTIHLTGDLDAQGCETLRGEFV-TLAESPSFALVDIDLEHVDFIDSSGIGLVVFLFK 67 Query: 64 KYHGK---IKLQGVSTHIEQLFSLIS 86 K + + + + + +L L+ Sbjct: 68 KLRTQEVDLSIVNIHSQPLELIKLLR 93 >gi|183220593|ref|YP_001838589.1| putative anti-sigma factor antagonist [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910701|ref|YP_001962256.1| anti-sigma factor antagonist [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|56384915|gb|AAV85860.1| putative anti-sigma factor antagonist [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|167775377|gb|ABZ93678.1| Antisigma factor antagonist [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779015|gb|ABZ97313.1| Putative anti-sigma factor antagonist [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 110 Score = 36.8 bits (84), Expect = 6.2, Method: Composition-based stats. Identities = 11/88 (12%), Positives = 37/88 (42%), Gaps = 4/88 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G V G ++ ++ + + S+ ++++ + + + G + + Sbjct: 8 DGKLVVYLEGRLDV-SVANEVEEGLTELIDSLGHRKVLLNMKDVEYMSSSGFRACISTLR 66 Query: 64 KYHGK---IKLQGVSTHIEQLFSLISFT 88 K + K +K+ + ++++F +I T Sbjct: 67 KLNSKEGFLKISNIKPAVKRIFDVIELT 94 >gi|254410510|ref|ZP_05024289.1| hypothetical protein MC7420_3025 [Microcoleus chthonoplastes PCC 7420] gi|196182716|gb|EDX77701.1| hypothetical protein MC7420_3025 [Microcoleus chthonoplastes PCC 7420] Length = 124 Score = 36.8 bits (84), Expect = 6.3, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 37/90 (41%), Gaps = 4/90 (4%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MYFME 63 ++ R G + E+ + AI S + + +VD+ + +D+ G ++ + + Sbjct: 11 SIVRPTGQVNASNAVELDRQLKSAI-LSERYSTVLVDMQQVETLDSAGLGVLVSALRLAQ 69 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 + + + L V + +F L +I Sbjct: 70 QRNQRFSLCSVGDSVRMIFELTQLDQAMEI 99 >gi|320010158|gb|ADW05008.1| Sulfate transporter/antisigma-factor antagonist STAS [Streptomyces flavogriseus ATCC 33331] Length = 131 Score = 36.8 bits (84), Expect = 6.3, Method: Composition-based stats. Identities = 18/107 (16%), Positives = 33/107 (30%), Gaps = 7/107 (6%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G V R G+ S I + + A ++D SA+T D+ L++ Sbjct: 24 DGHWVVRAQGDLDSDTIDPLFIALWEAAP---GHAVVVLDASAVTFADSSFLSLLIEVHR 80 Query: 64 KYHGKIKLQGVS----THIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106 + ++ G L +I + P R Sbjct: 81 RTELRVAAPGTVLARLLRTAGLDRVIRSYPTLEAALGDPPRGSGAPP 127 >gi|24213539|ref|NP_711020.1| anti-sigma factor antagonist [Leptospira interrogans serovar Lai str. 56601] gi|45658618|ref|YP_002704.1| anti-sigma factor antagonist [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24194323|gb|AAN48038.1| anti-sigma factor antagonist [Leptospira interrogans serovar Lai str. 56601] gi|45601862|gb|AAS71341.1| anti-sigma factor antagonist [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 110 Score = 36.8 bits (84), Expect = 6.4, Method: Composition-based stats. Identities = 12/89 (13%), Positives = 38/89 (42%), Gaps = 4/89 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +G+ + G +E+ +++ I+ I+++ + + + G + + Sbjct: 7 RDGVLIVYLKGRLDVSIANEVEENLNDLIDNQ-GHKKVILNMQEVDYMSSSGFRACISTL 65 Query: 63 EKYH---GKIKLQGVSTHIEQLFSLISFT 88 K + G +K+ + ++++F +I T Sbjct: 66 RKLNSKEGALKISNIKPAVKRIFDVIELT 94 >gi|297204186|ref|ZP_06921583.1| anti-sigma F factor antagonist [Streptomyces sviceus ATCC 29083] gi|197714124|gb|EDY58158.1| anti-sigma F factor antagonist [Streptomyces sviceus ATCC 29083] Length = 147 Score = 36.4 bits (83), Expect = 6.5, Method: Composition-based stats. Identities = 11/85 (12%), Positives = 39/85 (45%), Gaps = 4/85 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G+ V G ++ + + +++ + ++ + DLS +T +D+ G + + + Sbjct: 46 DGVRVVTVRGE-IDHDVKGVLTEALLSEDGAVPPPRIVADLSGVTFMDSSGINVFVAAYQ 104 Query: 64 KYHGK---IKLQGVSTHIEQLFSLI 85 + G +++ G + ++ ++ Sbjct: 105 QVSGAQGWLRIAGAQDSVLRVLQMV 129 >gi|307153376|ref|YP_003888760.1| anti-sigma-factor antagonist [Cyanothece sp. PCC 7822] gi|306983604|gb|ADN15485.1| anti-sigma-factor antagonist [Cyanothece sp. PCC 7822] Length = 107 Score = 36.4 bits (83), Expect = 6.5, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 37/85 (43%), Gaps = 5/85 (5%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTI--GAELI-MYFMEK 64 V + +G + + + ++ + + I D ++D +T +D+ GA ++ + Sbjct: 7 VVKPSGILDATQAPDFRQEISQLVKEKI--DIIVIDFRDVTFMDSSGLGALVLSLRTAHS 64 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89 K+ L ++ I+ LF L S Sbjct: 65 AGSKLFLCSINEQIQMLFKLTSMDR 89 >gi|148242429|ref|YP_001227586.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Synechococcus sp. RCC307] gi|147850739|emb|CAK28233.1| Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Synechococcus sp. RCC307] Length = 138 Score = 36.4 bits (83), Expect = 6.5, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 37/106 (34%), Gaps = 3/106 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++ +F F G SE + N ++DLS I ID+ G ++ Sbjct: 34 QDQCLLFHFTGQ--LDAYSERQFRDFIGDNAPSGLKPLVIDLSKIDFIDSSGLGALVQLA 91 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFK 108 ++++ + + + ++ + + N +P + Sbjct: 92 KQWNEGKR-RFLIVGNSRVVQTVKLVRLEAFLNLQPDLPTALGNIA 136 >gi|159038342|ref|YP_001537595.1| anti-sigma-factor antagonist [Salinispora arenicola CNS-205] gi|157917177|gb|ABV98604.1| anti-sigma-factor antagonist [Salinispora arenicola CNS-205] Length = 178 Score = 36.4 bits (83), Expect = 6.5, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Query: 16 KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 + + + + A +VDLSA+ +ID++G L++ ++ + Sbjct: 86 SAAAVDPLRTALTEATE---HEGRVVVDLSAVEQIDSVGLGLLVRARQEARQR 135 >gi|255719113|ref|XP_002555837.1| KLTH0G18656p [Lachancea thermotolerans] gi|238937221|emb|CAR25400.1| KLTH0G18656p [Lachancea thermotolerans] Length = 957 Score = 36.4 bits (83), Expect = 6.7, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 43/97 (44%), Gaps = 13/97 (13%) Query: 160 MYYVGVSGVPVVILISFVTGA---VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 +YYVG++ + +++ G VI A LS G + L + T Sbjct: 446 LYYVGLATLGGSVVLGLSGGLLAPVIGAGIAAGLSTAGITGATGFLTGVGG--------T 497 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 A++ + +AI A+IG+ +++ + ++RT + Sbjct: 498 AIV--ATTSTAIGAKIGTQAMSKRMGSVRTFEFSPLH 532 >gi|89099503|ref|ZP_01172379.1| anti-anti-sigma factor (antagonist of RsbW) [Bacillus sp. NRRL B-14911] gi|89085889|gb|EAR65014.1| anti-anti-sigma factor (antagonist of RsbW) [Bacillus sp. NRRL B-14911] Length = 110 Score = 36.4 bits (83), Expect = 6.8, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 45/100 (45%), Gaps = 6/100 (6%) Query: 1 MSENGITV-FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 + EN V + +G + ++ + + K ++ +VDLS ++ +D+ G + + Sbjct: 7 LKENDTLVQAKISGEIDAYTAPKLRESLFPLSEK--EAVEMVVDLSEVSYMDSTGLGVFV 64 Query: 60 YFMEKYH---GKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96 + GK ++ G+S +++LF + I +Q Sbjct: 65 GVFKNVRSNNGKFQIVGLSERLKRLFEITGLADIIDINSQ 104 >gi|258652299|ref|YP_003201455.1| PAS/PAC sensor protein [Nakamurella multipartita DSM 44233] gi|258555524|gb|ACV78466.1| putative PAS/PAC sensor protein [Nakamurella multipartita DSM 44233] Length = 340 Score = 36.4 bits (83), Expect = 6.8, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 29/65 (44%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +GI V AG+ + + + ++ + +VDL+ + + ++G ++ F Sbjct: 238 DGIPVLHVAGDVDLSTGPQFTALLATLVGQAERPTPVVVDLTDLGHLGSVGLAVLTQFHR 297 Query: 64 KYHGK 68 + GK Sbjct: 298 RCQGK 302 >gi|29347516|ref|NP_811019.1| putative transmembrane hexose transporter [Bacteroides thetaiotaomicron VPI-5482] gi|253570857|ref|ZP_04848265.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|29339416|gb|AAO77213.1| putative transmembrane hexose transporter [Bacteroides thetaiotaomicron VPI-5482] gi|251839806|gb|EES67889.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 386 Score = 36.4 bits (83), Expect = 6.8, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 57/176 (32%), Gaps = 14/176 (7%) Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219 M G + ++ L+S G ++ Q + + A +ILQ+ + LLT V+ Sbjct: 63 MDKKGRKTISLIGLLSTFIGMLLPLLTFTQTACYIAFALLGIGNTILQVS-LNPLLTNVI 121 Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279 G+ S M + I A+ + V S I+ P+ + S I Sbjct: 122 AEGKLSS-------IMTAGQFIKALSSFVGPIVAGFCSVYFNNWILMFPIFAAITLISGI 174 Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I + D F + S I I IV + G V Sbjct: 175 WLFFTPINEKDDKRLTSSFYQVISLLKNKTI------CLLFGGIICIVGLDVGMNV 224 >gi|78187225|ref|YP_375268.1| anti-anti-sigma regulatory factor, SpoIIAA [Chlorobium luteolum DSM 273] gi|78167127|gb|ABB24225.1| anti-anti-sigma regulatory factor, SpoIIAA [Chlorobium luteolum DSM 273] Length = 107 Score = 36.4 bits (83), Expect = 6.9, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 35/88 (39%), Gaps = 7/88 (7%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 NGI V G + + + A S I++L + ID+ G L++ Sbjct: 9 NGIKVLSLEGVLNAASSPKFKAYLETA----DHSGPMIINLEQVEFIDSSGLGLLVRLAR 64 Query: 64 K---YHGKIKLQGVSTHIEQLFSLISFT 88 + + +KL ++ ++++F + Sbjct: 65 QKKSANEALKLAKMNDRVKRVFEITQAH 92 >gi|317488951|ref|ZP_07947481.1| anti-anti-sigma factor [Eggerthella sp. 1_3_56FAA] gi|325831058|ref|ZP_08164382.1| STAS domain protein [Eggerthella sp. HGA1] gi|316912025|gb|EFV33604.1| anti-anti-sigma factor [Eggerthella sp. 1_3_56FAA] gi|325486979|gb|EGC89425.1| STAS domain protein [Eggerthella sp. HGA1] Length = 101 Score = 36.4 bits (83), Expect = 6.9, Method: Composition-based stats. Identities = 8/90 (8%), Positives = 38/90 (42%), Gaps = 6/90 (6%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK--- 64 V + G+ + +++ + + ++ + ++D + + + + G +++ ++ Sbjct: 15 VLKLGGHLNTNTAADLEEALEPVFERTSK---VVLDFADLEYLSSAGLRVLVATQKRVTA 71 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIK 94 G +++ S I ++F + ++ Sbjct: 72 AEGALRIVNASDDIREVFDITGLIDVFDVE 101 >gi|313901410|ref|ZP_07834878.1| major facilitator superfamily MFS_1 [Thermaerobacter subterraneus DSM 13965] gi|313468324|gb|EFR63770.1| major facilitator superfamily MFS_1 [Thermaerobacter subterraneus DSM 13965] Length = 437 Score = 36.4 bits (83), Expect = 6.9, Method: Composition-based stats. Identities = 18/139 (12%), Positives = 51/139 (36%), Gaps = 9/139 (6%) Query: 87 FTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASS 146 + + P + + G + + +L ++S + Sbjct: 185 LVPEPQRPGEAPAPGPYLRRMGRIFQAKGASLAVSFLAGFTALFMLFGLLSVYSDLLERP 244 Query: 147 YKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF---GAEIFSIDLM 203 + +GF+ L+ + V V + ++V+G V+ ++ + L G I ++ Sbjct: 245 FGIRGFVKGLVVAI------PVAVATITAYVSGIVLQERLSRYLKAVVVTGLAILALGTA 298 Query: 204 SILQLREIGVLLTAVMIAG 222 ++ R++ ++ A+ + G Sbjct: 299 ALFLTRQLVPMVAAISVMG 317 >gi|218778831|ref|YP_002430149.1| anti-sigma-factor antagonist [Desulfatibacillum alkenivorans AK-01] gi|218760215|gb|ACL02681.1| anti-sigma-factor antagonist [Desulfatibacillum alkenivorans AK-01] Length = 125 Score = 36.4 bits (83), Expect = 6.9, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 33/89 (37%), Gaps = 5/89 (5%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 + G+ + S++ V + S D+ + + + G +I+ +EK Sbjct: 16 IIHLGGSLDTVTASQLDKKVDEVLTGSPAH--LTFDMENLEYMSSAGVRVILKASKGLEK 73 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 GK + I+++F +I I Sbjct: 74 NKGKTTFVNLQPQIKKVFEIIRAMPDMSI 102 >gi|116621958|ref|YP_824114.1| anti-sigma-factor antagonist [Candidatus Solibacter usitatus Ellin6076] gi|116225120|gb|ABJ83829.1| anti-sigma-factor antagonist [Candidatus Solibacter usitatus Ellin6076] Length = 110 Score = 36.4 bits (83), Expect = 6.9, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 45/87 (51%), Gaps = 8/87 (9%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSD--SAIVDLSAITEIDTIGAELIMY 60 ++GI V AG + + + AI + D + ++D+S + +D+ G +++ Sbjct: 9 DSGIGVVTIAGR---LALGGETERLDAAIKGMLAKDVKTFVLDISGLDYVDSSGIGMLVS 65 Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSL 84 + +K G++KL G + I+++FS+ Sbjct: 66 CLTNAKKAGGELKLVGANPRIKRIFSM 92 >gi|300702842|ref|YP_003744443.1| hypothetical protein RCFBP_10493 [Ralstonia solanacearum CFBP2957] gi|299070504|emb|CBJ41799.1| conserved protein of unknown function, STAS domain [Ralstonia solanacearum CFBP2957] Length = 104 Score = 36.4 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 12/102 (11%), Positives = 38/102 (37%), Gaps = 2/102 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSD--SAIVDLSAITEIDTIGAELIMYFMEKYH 66 +G E I + ++++ Q+ + VD + +++ID+ +++ + Sbjct: 2 LTLSGPLTHREAPRILREGEAQLSQASQAGTMAVRVDCAGLSQIDSSALAVLLSWQRTAQ 61 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFK 108 ++ E L +L + + P + ++ + Sbjct: 62 AAGIALDIAAAPEALRNLATLYGVDALLAVAPATTASHHPAR 103 >gi|212638843|ref|YP_002315363.1| stage II sporulation protein AA (antagonist of anti-sigma factor, stand-alone STAS domain) [Anoxybacillus flavithermus WK1] gi|212560323|gb|ACJ33378.1| Stage II sporulation protein AA (antagonist of anti-sigma factor, stand-alone STAS domain) [Anoxybacillus flavithermus WK1] Length = 118 Score = 36.4 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 42/84 (50%), Gaps = 4/84 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60 + + R AG ++ ++ + + + + +++L+ +T +D+ G +I+ Sbjct: 13 QHVLLVRLAGELDHHTAEQLRAEITDVLERE-RIKAIVLNLNELTFMDSSGLGVILGRYK 71 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSL 84 +++ G++ + VS I++LF + Sbjct: 72 QIQRMGGEMVVCSVSPSIKRLFDM 95 >gi|24215134|ref|NP_712615.1| anti-sigma factor antagonist [Leptospira interrogans serovar Lai str. 56601] gi|45657389|ref|YP_001475.1| anti-sigma factor antagonist [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24196200|gb|AAN49633.1| anti-sigma factor antagonist [Leptospira interrogans serovar Lai str. 56601] gi|45600628|gb|AAS70112.1| anti-sigma factor antagonist [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 109 Score = 36.4 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 37/88 (42%), Gaps = 4/88 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MY 60 N + GN +I + I K+ S ++DLS++ I + G +I + Sbjct: 9 NHSKIIHLIGNLDVHNTHKIESAFMEQI-KTGNSRVIVLDLSSVEFISSAGLRIIVAALR 67 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFT 88 + + +L G+ ++++F +I Sbjct: 68 ICREKDVEFRLAGIKPAVKKVFEIIDMN 95 >gi|260778740|ref|ZP_05887632.1| anti-anti-sigma regulatory factor [Vibrio coralliilyticus ATCC BAA-450] gi|260604904|gb|EEX31199.1| anti-anti-sigma regulatory factor [Vibrio coralliilyticus ATCC BAA-450] Length = 105 Score = 36.4 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 35/86 (40%), Gaps = 5/86 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 N I + GN + S A + I Q +D + +D+ G ++Y + Sbjct: 10 NEILTLQIDGNLDADG-SRYAQQHIDEIIAD-QHGEVEIDFRNVRFLDSSGVGALVYLYK 67 Query: 64 KY---HGKIKLQGVSTHIEQLFSLIS 86 + +++++ V+ ++ +L+ Sbjct: 68 RLVERERQMRIENVTGQPLEIINLLR 93 >gi|300870194|ref|YP_003785065.1| anti sigma factor antagonist [Brachyspira pilosicoli 95/1000] gi|300687893|gb|ADK30564.1| anti sigma factor antagonist [Brachyspira pilosicoli 95/1000] Length = 111 Score = 36.4 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 43/85 (50%), Gaps = 5/85 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 EN +V + G+ S++ D + I+ + I+D+ + ID+ G + ++ + Sbjct: 9 ENNTSVIKLVGDIDVYTSSDLKDAINSQID--FGAKRIIIDMEDVYYIDSSGIGVFVFAI 66 Query: 63 ---EKYHGKIKLQGVSTHIEQLFSL 84 ++ +GKI + ++ ++ ++F L Sbjct: 67 GSFKRVNGKIGIVKITENVRKVFEL 91 >gi|290955484|ref|YP_003486666.1| anti-anti-sigma-factor [Streptomyces scabiei 87.22] gi|260645010|emb|CBG68096.1| putative anti-anti-sigma-factor [Streptomyces scabiei 87.22] Length = 127 Score = 36.4 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 30/97 (30%), Gaps = 5/97 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++ G TV G EI + A S ++DL + D G L+ Sbjct: 17 TDRGRTVLELHGEIDIAAAVEIIPHLDAAT--SGPGARIVIDLRHVEFFDCSGLRLLYRA 74 Query: 62 MEK---YHGKIKLQGVSTHIEQLFSLISFTHRKKIKN 95 ++ G+++L ++ + Sbjct: 75 RQRVLDRDGELRLVCTHPLTLRVLKVTGLARLLPPAP 111 >gi|78050010|ref|YP_366185.1| hypothetical protein XCV4454 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78038440|emb|CAJ26185.1| conserved hypothetical protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 91 Score = 36.4 bits (83), Expect = 7.3, Method: Composition-based stats. Identities = 9/90 (10%), Positives = 31/90 (34%), Gaps = 7/90 (7%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66 G ++ + ++ + +DLS + +D+ G ++ + Sbjct: 7 TLVITGVLDRAAVTAAWPQAIAQLD-----GARTLDLSGVQRLDSAGVAMLAELAARLRQ 61 Query: 67 -GKIKLQGVSTHIEQLFSLISFTHRKKIKN 95 G + G ++ +++L + + + Sbjct: 62 AGSGAVVGEASGLDELRAAYRLSPTLDFQA 91 >gi|284990742|ref|YP_003409296.1| hypothetical protein Gobs_2242 [Geodermatophilus obscurus DSM 43160] gi|284063987|gb|ADB74925.1| hypothetical protein Gobs_2242 [Geodermatophilus obscurus DSM 43160] Length = 116 Score = 36.4 bits (83), Expect = 7.4, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 34/86 (39%), Gaps = 9/86 (10%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E+ V G+ P + ++ + V + + V ++++ ID+ G L++ + Sbjct: 23 EDAGPVLHLLGDVDGPLVGQLRAEGVD------ERELVAVHVASVGYIDSAGLSLLVRWA 76 Query: 63 EKYHGKIK---LQGVSTHIEQLFSLI 85 + + L+ S ++ L Sbjct: 77 QSAARDGRPAVLRHASPRFREVLDLA 102 >gi|148273908|ref|YP_001223469.1| hypothetical protein CMM_2724 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831838|emb|CAN02808.1| unnamed protein product [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 112 Score = 36.4 bits (83), Expect = 7.4, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 39/104 (37%), Gaps = 6/104 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---M 59 E+ +TV AG E+ + A+ + +VDL+ + ID+ G + + Sbjct: 11 EDDVTVVTAAGMLNMAAAPELRQAIHDALEPA--PARIVVDLAGVDFIDSSGLGALIAGL 68 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFF 103 G +++ ++ + L S R I + ++ Sbjct: 69 RSARDAGGDLRISAPGPQVQMVLQL-SNLDRVLISTPTAEAAYR 111 >gi|317132445|ref|YP_004091759.1| anti-sigma-factor antagonist [Ethanoligenens harbinense YUAN-3] gi|315470424|gb|ADU27028.1| anti-sigma-factor antagonist [Ethanoligenens harbinense YUAN-3] Length = 101 Score = 36.4 bits (83), Expect = 7.5, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 38/87 (43%), Gaps = 4/87 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59 ++ + G + +++ +I ++ + + +D +T +D+ G L+M Sbjct: 7 NDAHVLTVYLDGEIDHHAAQNLREEIDTSIERA-RPSALALDFRGVTFMDSSGIGLVMGR 65 Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLI 85 M+ + G + ++ S HI ++ L Sbjct: 66 YRAMQPFGGIVTVKNASMHIRKVMRLA 92 >gi|218289602|ref|ZP_03493822.1| anti-sigma-factor antagonist [Alicyclobacillus acidocaldarius LAA1] gi|258511713|ref|YP_003185147.1| anti-sigma-factor antagonist [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|218240252|gb|EED07435.1| anti-sigma-factor antagonist [Alicyclobacillus acidocaldarius LAA1] gi|257478439|gb|ACV58758.1| anti-sigma-factor antagonist [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 114 Score = 36.4 bits (83), Expect = 7.5, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 36/85 (42%), Gaps = 4/85 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 E GI V G + ++ D + + + ++ I +D+ G LI+ Sbjct: 8 ERGIVVIELKGELDHHAVEQMRDRIEQQLAEH-GYRGLVMSFRNIDFMDSSGLGLILGRY 66 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSL 84 + ++ GK+ L V+ + +LF + Sbjct: 67 RSVSEHGGKMALCEVNPTLRRLFEM 91 >gi|154148769|ref|YP_001406662.1| Na+/Pi-cotransporter [Campylobacter hominis ATCC BAA-381] gi|153804778|gb|ABS51785.1| Na+/Pi-cotransporter [Campylobacter hominis ATCC BAA-381] Length = 593 Score = 36.4 bits (83), Expect = 7.5, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 71/192 (36%), Gaps = 9/192 (4%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + I ++ D ++ GL I+ F + K L+ + +S Sbjct: 135 MPIFIFGAVLALFKDEKTKGA--GLFIAGVALFFLAIAYMKDGFLNFKSTIE---LSKYA 189 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 + ++ + A+I L A I ++ L ++ + ++ I GS I Sbjct: 190 LSGVLGIIVYALIGVFITALLQSSHASI-TLALTALASSQITYENAVSITIGANLGSTIT 248 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A IGS+K+N E + + + + ++ I +++ L + + + G S Sbjct: 249 AIIGSLKVNNEA---KKLTITHIIFNLTTAILTILLFNVFLKAVDISADLFGISQDDNIL 305 Query: 290 YDIPFAVFFSRF 301 F +F+ F Sbjct: 306 KLAIFQSYFNIF 317 >gi|320107759|ref|YP_004183349.1| anti-anti-sigma factor [Terriglobus saanensis SP1PR4] gi|319926280|gb|ADV83355.1| anti-anti-sigma factor [Terriglobus saanensis SP1PR4] Length = 115 Score = 36.4 bits (83), Expect = 7.6, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 39/84 (46%), Gaps = 4/84 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF-- 61 +GITV +G E S D + + Q S +++L ++ +D+ G ++ Sbjct: 11 DGITVLDLSGRITLGEGSVTLRDAIRDLINKGQ-KSILLNLGDVSYLDSSGLGELVTAYT 69 Query: 62 -MEKYHGKIKLQGVSTHIEQLFSL 84 ++ G++KL ++ ++ L + Sbjct: 70 SVKNSGGELKLLNLTKKVQDLLQI 93 >gi|228919420|ref|ZP_04082787.1| hypothetical protein bthur0011_4460 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228840251|gb|EEM85525.1| hypothetical protein bthur0011_4460 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 404 Score = 36.4 bits (83), Expect = 7.6, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 25/71 (35%), Gaps = 2/71 (2%) Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325 S P L I +IG I + +F SR N+F I A AIG Sbjct: 247 STPTLNIQYVLGKLIGIIFAI--LMQMAAVIFISRIIFQMNWGNLFDIFIITTVYAFAIG 304 Query: 326 IVAMKEGFAVG 336 V + GF Sbjct: 305 SVILFWGFTAK 315 >gi|196233315|ref|ZP_03132160.1| anti-sigma-factor antagonist [Chthoniobacter flavus Ellin428] gi|196222620|gb|EDY17145.1| anti-sigma-factor antagonist [Chthoniobacter flavus Ellin428] Length = 108 Score = 36.4 bits (83), Expect = 7.6, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 37/90 (41%), Gaps = 5/90 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +N + G ++ + + +++ + +VD S +T ID+ G ++ + Sbjct: 6 QNQTGILALEGEIDLHRSPQVKETLEPLVSQKV--PRILVDFSQVTYIDSSGLATMIETL 63 Query: 63 EK---YHGKIKLQGVSTHIEQLFSLISFTH 89 ++ Y GK + G+ + +F + Sbjct: 64 QRIQSYGGKFAMFGLRDSVRNIFEIARLDQ 93 >gi|163803757|ref|ZP_02197614.1| putative anti-sigma B factor antagonist [Vibrio sp. AND4] gi|159172441|gb|EDP57310.1| putative anti-sigma B factor antagonist [Vibrio sp. AND4] Length = 107 Score = 36.4 bits (83), Expect = 7.7, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 10/82 (12%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLS--AITEIDTIGAELIMYFME-- 63 + + G + + A+ + Q ++ S I ID+ G ++++ +E Sbjct: 14 ILKLTGALDRDSVPTLW-----AVAQQWQPAQTELECSLEEIERIDSAGMVMLIHLLEHA 68 Query: 64 -KYHGKIKLQGVSTHIEQLFSL 84 K + I L V + LF L Sbjct: 69 KKQNCHIMLSFVPAQLRTLFQL 90 >gi|237809663|ref|YP_002894103.1| anti-anti-sigma factor family protein [Tolumonas auensis DSM 9187] gi|237501924|gb|ACQ94517.1| anti-anti-sigma factor family protein [Tolumonas auensis DSM 9187] Length = 86 Score = 36.4 bits (83), Expect = 7.8, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 38/78 (48%), Gaps = 9/78 (11%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EKYH 66 + GN + +++++ ++ +D+S++ +ID+ G ++ + + + Sbjct: 2 KLTGNLDAVQVTQLWPGREELFRQN------ELDVSSVNKIDSAGVAFLVKWAQACQATN 55 Query: 67 GKIKLQGVSTHIEQLFSL 84 ++ +QG S + QL SL Sbjct: 56 QRLLVQGASPELVQLISL 73 >gi|86160180|ref|YP_466965.1| anti-sigma-factor antagonist domain-containing protein [Anaeromyxobacter dehalogenans 2CP-C] gi|197124207|ref|YP_002136158.1| sulfate transporter/antisigma-factor antagonist STAS [Anaeromyxobacter sp. K] gi|220918987|ref|YP_002494291.1| Sulfate transporter/antisigma-factor antagonist STAS [Anaeromyxobacter dehalogenans 2CP-1] gi|85776691|gb|ABC83528.1| anti-sigma-factor antagonist (STAS) domain protein [Anaeromyxobacter dehalogenans 2CP-C] gi|196174056|gb|ACG75029.1| Sulfate transporter/antisigma-factor antagonist STAS [Anaeromyxobacter sp. K] gi|219956841|gb|ACL67225.1| Sulfate transporter/antisigma-factor antagonist STAS [Anaeromyxobacter dehalogenans 2CP-1] Length = 100 Score = 36.4 bits (83), Expect = 7.8, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 8/80 (10%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +++ +TV R G E+S IA A + + +VDL +T + GA L+ Sbjct: 6 NQDEVTVIRCVGELTRDELSAIAGLAQRARH---EGRMVVVDLKRVTHLHYAGAALL--- 59 Query: 62 MEKYHGKIKLQGVSTHIEQL 81 K ++ G S ++ L Sbjct: 60 --KAIPGLRAAGASRYVRDL 77 >gi|119357623|ref|YP_912267.1| anti-sigma-factor antagonist [Chlorobium phaeobacteroides DSM 266] gi|119354972|gb|ABL65843.1| anti-sigma-factor antagonist [Chlorobium phaeobacteroides DSM 266] Length = 115 Score = 36.4 bits (83), Expect = 7.9, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 35/85 (41%), Gaps = 7/85 (8%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 ITV G S + + + S+ D ++DL+ + +D+ G ++ K Sbjct: 11 ITVVALQG--TLDSSSSV--QLHNYTSPSVTEDPLVIDLTNLNFLDSSGLGALVEIARKK 66 Query: 66 HGK---IKLQGVSTHIEQLFSLISF 87 K +KL ++ + ++F + Sbjct: 67 REKGSDVKLACMNEKVRKVFEITQA 91 >gi|307353526|ref|YP_003894577.1| glycosyl transferase family 2 protein [Methanoplanus petrolearius DSM 11571] gi|307156759|gb|ADN36139.1| glycosyl transferase family 2 [Methanoplanus petrolearius DSM 11571] Length = 385 Score = 36.4 bits (83), Expect = 7.9, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 30/76 (39%), Gaps = 5/76 (6%) Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318 R L LP L I F I+GA ++ Y + S HS + +F G ++A Sbjct: 229 RFMLLYQPLPFLAIPGFFFFIMGAVLMAIYYLEGNLEN--SNLHSFVLASILFIGGLQAI 286 Query: 319 FMACAI---GIVAMKE 331 M I I+A Sbjct: 287 LMGINIKTYSIIAGYN 302 >gi|239926725|ref|ZP_04683678.1| anti-sigma factor antagonist [Streptomyces ghanaensis ATCC 14672] gi|291435042|ref|ZP_06574432.1| predicted protein [Streptomyces ghanaensis ATCC 14672] gi|291337937|gb|EFE64893.1| predicted protein [Streptomyces ghanaensis ATCC 14672] Length = 139 Score = 36.4 bits (83), Expect = 7.9, Method: Composition-based stats. Identities = 11/94 (11%), Positives = 36/94 (38%), Gaps = 9/94 (9%) Query: 16 KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFMEKYHGKIKLQ 72 + ++++ +++ S ++DLS +T +D+ G ++ ++ L Sbjct: 51 TAHQLADALQPLLLT-----DGHSVLLDLSGVTFLDSTGLTCLIAAYRTARTNGARLVLI 105 Query: 73 GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106 S + + +L + + P +++ Sbjct: 106 APSERVRHMLAL-TGVDQVLRSYPTPDSVPDWSA 138 >gi|262193533|ref|YP_003264742.1| anti-sigma-factor antagonist [Haliangium ochraceum DSM 14365] gi|262076880|gb|ACY12849.1| anti-sigma-factor antagonist [Haliangium ochraceum DSM 14365] Length = 103 Score = 36.4 bits (83), Expect = 7.9, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 36/89 (40%), Gaps = 6/89 (6%) Query: 2 SENGI-TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +NG T G E++ + + + + +VDLS + ID+ G ++ Sbjct: 10 EDNGDDTTISITGKLDVLTAPEMSTLIDGLVAE--KRRKVVVDLSGLDLIDSSGVAALVG 67 Query: 61 FMEKYH---GKIKLQGVSTHIEQLFSLIS 86 ++ G + ++G+ +F L+ Sbjct: 68 MYKRVRAEGGDVTIRGIRDQPLAIFKLLR 96 >gi|188532483|ref|YP_001906280.1| Anti-sigma B factor antagonist [Erwinia tasmaniensis Et1/99] gi|188027525|emb|CAO95372.1| Anti-sigma B factor antagonist [Erwinia tasmaniensis Et1/99] Length = 98 Score = 36.4 bits (83), Expect = 7.9, Method: Composition-based stats. Identities = 10/71 (14%), Positives = 32/71 (45%), Gaps = 6/71 (8%) Query: 20 ISEIADDVVMAI---NKSIQSDSAIVDLSAITEIDTIGAELIMYFME---KYHGKIKLQG 73 I E+ + ++ + + + +D+S + +D+ G L+++ + + + G Sbjct: 17 IGELERETLLPLWQQREQVMEHVESIDVSGLERVDSGGLALLVHLRQIAILHGRNPRFTG 76 Query: 74 VSTHIEQLFSL 84 ++ + L +L Sbjct: 77 INDRLNSLIAL 87 >gi|162454601|ref|YP_001616968.1| anti-anti sigma factor protein [Sorangium cellulosum 'So ce 56'] gi|161165183|emb|CAN96488.1| anti-anti sigma factor protein [Sorangium cellulosum 'So ce 56'] Length = 350 Score = 36.4 bits (83), Expect = 7.9, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 36/82 (43%), Gaps = 4/82 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +GI G + + I + ++ AI + Q++ I+D++ + +D GA + + Sbjct: 213 DGILALPLIGQIDAERAARILEVLLQAIVDT-QAEHVIIDVTGVPFMDAEGARHLRDTVR 271 Query: 64 K---YHGKIKLQGVSTHIEQLF 82 + + G+S + +L Sbjct: 272 ASSLLGAQCVIAGISPAMARLL 293 >gi|225438978|ref|XP_002284329.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|147768860|emb|CAN78136.1| hypothetical protein VITISV_034055 [Vitis vinifera] Length = 309 Score = 36.4 bits (83), Expect = 7.9, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 91/281 (32%), Gaps = 46/281 (16%) Query: 9 FRFAGNWKSPEISEIA------DDVVMAINKSIQSDSAIVDLSAITEID----TIGAELI 58 R + W + + + + V I SI D I D T+ + Sbjct: 7 VRASSAWVAARSAHVVVDSSGIEKAVEEIQDSI--PKVKWDFEGIHYFDNGPLTVQYLFV 64 Query: 59 MYFMEK-YHGKIKLQ------GVSTHIEQLFSLISFTHRKKIKNQK-------PQRSFFY 104 + + + L G+ ++ S+ +KI + P+ Sbjct: 65 LDALNFCFWPDKDLSYDHLALGLKEALQNDKSVFDSDRLQKITGPQLRELLKWPRPLPLE 124 Query: 105 NSFKNLHYHIGKKIVKFINDSCS-QAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYY 162 N L + +G ++ + S G +N + F+ + Q++ Sbjct: 125 NERVRLLHEVGLELERSFEGKASKLVESCGKSAANLVALVTRHFPGFRDHSVYKGHQVFL 184 Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL-----LTA 217 + + L G QG + + + D + LR++GVL L + Sbjct: 185 YKRAQIFAADLWGAFEG-----QGYGEFNDISSITIFADYIVPAVLRQLGVLRYSSDLAS 239 Query: 218 VMIAGRSGSAIVAEIGSMKINE-EIDAIRTMGLDFVRILIS 257 ++ A R EIGS E E+ A ++ +R L+S Sbjct: 240 IIEANR-------EIGSGSEEEVELRACSIYAVEKMRELLS 273 >gi|239930616|ref|ZP_04687569.1| anti anti sigma factor [Streptomyces ghanaensis ATCC 14672] Length = 126 Score = 36.4 bits (83), Expect = 8.0, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 5/73 (6%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59 + G V R +G S + V A+ S ++DLS + D+ G +++ Sbjct: 11 EQGGWAVLRVSGELDLLTSSVLRQRVHDAVAD--GRHSLVLDLSDVWFCDSSGVGVLIAA 68 Query: 60 -YFMEKYHGKIKL 71 + G ++L Sbjct: 69 RRLLRSCQGTLRL 81 >gi|53803966|ref|YP_114399.1| STAS domain-containing protein [Methylococcus capsulatus str. Bath] gi|53757727|gb|AAU92018.1| STAS domain protein [Methylococcus capsulatus str. Bath] Length = 120 Score = 36.4 bits (83), Expect = 8.0, Method: Composition-based stats. Identities = 9/64 (14%), Positives = 23/64 (35%), Gaps = 3/64 (4%) Query: 24 ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MYFMEKYHGKIKLQGVSTHIEQ 80 + + + +DL + D+ G L+ + K ++L+ + +E Sbjct: 33 PAALKETLPLFRTRNGVAIDLRGVERADSAGIALLIEWVRLARKRGVSLRLENMPAQVEN 92 Query: 81 LFSL 84 L + Sbjct: 93 LVRV 96 >gi|332172343|gb|AEE21597.1| anti-sigma-factor antagonist [Glaciecola agarilytica 4H-3-7+YE-5] Length = 110 Score = 36.4 bits (83), Expect = 8.1, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 20/61 (32%), Gaps = 1/61 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAIN-KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 F +G+ + + + + +DL + IDT G IM + Sbjct: 21 FVLSGSLNRDTVPYFWRNSLQQLASAQSDDKPLTLDLHNVGHIDTAGLAWIMNLIRDTKQ 80 Query: 68 K 68 K Sbjct: 81 K 81 >gi|220919629|ref|YP_002494932.1| hypothetical protein Mnod_8294 [Methylobacterium nodulans ORS 2060] gi|219952049|gb|ACL62440.1| hypothetical protein Mnod_8294 [Methylobacterium nodulans ORS 2060] Length = 235 Score = 36.4 bits (83), Expect = 8.1, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 36/115 (31%), Gaps = 10/115 (8%) Query: 49 EIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFK 108 +DT + + + G ++ L I+ + +P F +F Sbjct: 82 ALDTA----LRRTIRALWRTCRYPGDPPYLAGLLHQIAV---GRFDPHRPPWLFHPATFD 134 Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 IG++ V + ++ G +S + L+ RQ+ + Sbjct: 135 AAFRRIGRRTVGGGPKTAPANELVFRGNLGAGILFLTS---RVRLIDRRRQIAPI 186 >gi|299773132|gb|ADJ38646.1| accelerated cell death 6 [Arabidopsis thaliana] Length = 673 Score = 36.4 bits (83), Expect = 8.1, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 26/78 (33%), Gaps = 6/78 (7%) Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIW-KYYDIPFAVFFSRFHSTATLANIFTG 313 + + + IS+ I+G +++ Y +F F T ++ F G Sbjct: 598 IAHVKWLLVTISIISGGFFLCAIFILGPHVMLQRSYLPPSSGIFLKTFMLTIDISEFFVG 657 Query: 314 LIKAPFMACAIGIVAMKE 331 LIK C A Sbjct: 658 LIK-TCFGCE----ACYF 670 >gi|297564459|ref|YP_003683432.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848908|gb|ADH70926.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 123 Score = 36.4 bits (83), Expect = 8.2, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 37/89 (41%), Gaps = 5/89 (5%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFMEK 64 + G +++ + + A+ I+DLSA+ +D+ G +I+ + + Sbjct: 16 IVAIEGELDIATAADLQEHIQSAVEDH--GPWLILDLSALDFMDSSGLNVIINAYRTVRE 73 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 G + L ++ + ++ L+ + + Sbjct: 74 LGGSLALAALNERVTKVVRLVGLHRQVPV 102 >gi|149915483|ref|ZP_01904010.1| anti-anti-sigma factor [Roseobacter sp. AzwK-3b] gi|149810772|gb|EDM70613.1| anti-anti-sigma factor [Roseobacter sp. AzwK-3b] Length = 112 Score = 36.4 bits (83), Expect = 8.3, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 39/69 (56%), Gaps = 3/69 (4%) Query: 18 PEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH--GKIKLQGVS 75 ++ D++ ++ ++ D I+DLSA+T ID+ G ++ +++ +++L G++ Sbjct: 23 SGVAIRFKDLMRSLTET-GPDHVILDLSAVTFIDSSGLGALVGALKQMPTGKRLELAGLT 81 Query: 76 THIEQLFSL 84 + ++F L Sbjct: 82 RDVAKVFRL 90 >gi|119717160|ref|YP_924125.1| sulphate transporter [Nocardioides sp. JS614] gi|119537821|gb|ABL82438.1| sulphate transporter [Nocardioides sp. JS614] Length = 508 Score = 36.4 bits (83), Expect = 8.3, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 27/83 (32%), Gaps = 3/83 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E+ R G + + I + D ++ L I +D GA ++ + Sbjct: 410 EDATLHLRPTGVLYFGSAPALERSISRLIAEHPSVDRVVLHLDRIGRLDLTGALMLRDIL 469 Query: 63 ---EKYHGKIKLQGVSTHIEQLF 82 E +++G H L Sbjct: 470 ADAESAGRTFEIRGARAHAAGLL 492 >gi|255965556|gb|ACU45082.1| unknown [Pfiesteria piscicida] Length = 307 Score = 36.4 bits (83), Expect = 8.3, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 40/113 (35%), Gaps = 7/113 (6%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + ++ AG W+ + E+ + + + D +D +A+ A + Sbjct: 126 VGMGQRSLRHLAGIWQREPVPEVRLENEQLLGRIHIVDPCPIDRAAL-------AVFLRR 178 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYH 113 +++ L V L L + T +K+ ++ SFF N Y Sbjct: 179 RLQRIPLPGSLARVDAEAANLPELATRTGPEKVADEHAHTSFFPCLIMNAAYD 231 >gi|71279214|ref|YP_271180.1| STAS domain-containing protein [Colwellia psychrerythraea 34H] gi|71144954|gb|AAZ25427.1| STAS domain protein [Colwellia psychrerythraea 34H] Length = 100 Score = 36.4 bits (83), Expect = 8.5, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 31/80 (38%), Gaps = 6/80 (7%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66 +G ++ I + + VDLS ++++DT G + Y +E+ Sbjct: 12 TLTVSGQLSRHSVAHIKN---SEYVNWFAHGAINVDLSDVSKVDTAGLAWLFYLLEQAAH 68 Query: 67 --GKIKLQGVSTHIEQLFSL 84 ++ + + +L +L Sbjct: 69 HSCQLSFSNIPEKLTKLITL 88 >gi|323702538|ref|ZP_08114201.1| anti-sigma-factor antagonist [Desulfotomaculum nigrificans DSM 574] gi|323532512|gb|EGB22388.1| anti-sigma-factor antagonist [Desulfotomaculum nigrificans DSM 574] Length = 112 Score = 36.0 bits (82), Expect = 8.5, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 42/85 (49%), Gaps = 10/85 (11%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSI---QSDSAIVDLSAITEIDTIGAELIMYFM 62 + R G +AD++ +A++K + ++ I++LS +T ID+ G +I+ Sbjct: 11 TLLVRLGGELDL----GVADELRLALDKLLHEKKAKHLILNLSRVTFIDSSGLGVILGRY 66 Query: 63 EKY---HGKIKLQGVSTHIEQLFSL 84 ++ G+I L G ++++ L Sbjct: 67 KRLVQQGGQIILVGAQPPVKRILEL 91 >gi|255526138|ref|ZP_05393059.1| anti-sigma-factor antagonist [Clostridium carboxidivorans P7] gi|296187148|ref|ZP_06855545.1| anti-sigma F factor antagonist [Clostridium carboxidivorans P7] gi|255510187|gb|EET86506.1| anti-sigma-factor antagonist [Clostridium carboxidivorans P7] gi|296048183|gb|EFG87620.1| anti-sigma F factor antagonist [Clostridium carboxidivorans P7] Length = 111 Score = 36.0 bits (82), Expect = 8.5, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 37/86 (43%), Gaps = 4/86 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S++G + +G E+ + + +++ I+D S + +D+ G +++ Sbjct: 7 SKDGKLIVHMSGELDHHSAEEVRNKIDDRLDRDNIGK-LIMDFSDVNFMDSSGIGVVIGR 65 Query: 62 MEKY---HGKIKLQGVSTHIEQLFSL 84 +K G I + ++++F L Sbjct: 66 YKKLMSKKGNICITKADGSVKRVFEL 91 >gi|170717847|ref|YP_001784906.1| hypothetical protein HSM_1586 [Haemophilus somnus 2336] gi|168825976|gb|ACA31347.1| conserved hypothetical protein [Haemophilus somnus 2336] Length = 94 Score = 36.0 bits (82), Expect = 8.5, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 30/86 (34%), Gaps = 4/86 (4%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKS-IQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 R G + ++ + + + +LS + ID+ G L+ F+ + Sbjct: 2 TLRIMGALSRDTLLPFLQQRDELLSSAELVGQQLVWELSEVNRIDSAGFALLGDFINELE 61 Query: 67 GKI---KLQGVSTHIEQLFSLISFTH 89 ++ K+ +E L L + Sbjct: 62 KQVSSQKIHNAPIQLEILADLFGLSD 87 >gi|326429647|gb|EGD75217.1| diphthine synthase [Salpingoeca sp. ATCC 50818] Length = 1126 Score = 36.0 bits (82), Expect = 8.6, Method: Composition-based stats. Identities = 11/71 (15%), Positives = 29/71 (40%), Gaps = 2/71 (2%) Query: 22 EIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK-YHGKIKLQGVSTHIEQ 80 ++ + + K + + L + +DT+G LI +K + +++ ++ + Sbjct: 1007 DLPAEKRAHVRKVAREAARRRKLKQVERMDTLG-MLISRLEQKHHWLRMEKASLAADRQC 1065 Query: 81 LFSLISFTHRK 91 L + I R Sbjct: 1066 LINRIREKLRS 1076 >gi|195018626|ref|XP_001984818.1| GH14820 [Drosophila grimshawi] gi|193898300|gb|EDV97166.1| GH14820 [Drosophila grimshawi] Length = 465 Score = 36.0 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 23/164 (14%), Positives = 58/164 (35%), Gaps = 8/164 (4%) Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF---VRILISPRIWALIISLPLLT 271 + AV++ S + + M +I A+ +D I+ S +I +S L Sbjct: 272 MAAVIVIANQFSGLFTMLNYM---SDIFAMSGSSMDPNTSTIIIGSVQILGAYVSTILCD 328 Query: 272 ILA-NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330 + ++ + V F F+ + + ++ IG+++ Sbjct: 329 VFGRKILMLVSSGGVALSLTAFGFFTHFAGIYDLTDWGWVPVAIMSMDIFLGNIGLISCL 388 Query: 331 EGFAVGVHSNSL-GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 V + + + + +V S+V ++ ++F + G+ Sbjct: 389 FVLMVEMFPLKIRARATSIAIVVCSSLVFLMLNIFPLCMAKWGL 432 >gi|167767629|ref|ZP_02439682.1| hypothetical protein CLOSS21_02162 [Clostridium sp. SS2/1] gi|167710646|gb|EDS21225.1| hypothetical protein CLOSS21_02162 [Clostridium sp. SS2/1] gi|291560767|emb|CBL39567.1| diguanylate cyclase (GGDEF) domain [butyrate-producing bacterium SSC/2] Length = 450 Score = 36.0 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 26/79 (32%), Gaps = 2/79 (2%) Query: 249 LDFVRI--LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +D + + P + A + PL + L + + Y + FS +S Sbjct: 36 IDPISLTTAYIPIVVAGCLLGPLESTLIGLVFGLASMYKASALYVVSDDKIFSPLYSGNP 95 Query: 307 LANIFTGLIKAPFMACAIG 325 + +I + IG Sbjct: 96 IGSILLSVGSRVLFGFVIG 114 >gi|74318558|ref|YP_316298.1| hypothetical protein Tbd_2540 [Thiobacillus denitrificans ATCC 25259] gi|74058053|gb|AAZ98493.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC 25259] Length = 370 Score = 36.0 bits (82), Expect = 8.8, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 8/84 (9%) Query: 18 PEISEIADDVVMA-----INKSIQSDSAIVDLSAITEIDTIGA---ELIMYFMEKYHGKI 69 E+ + D A I + ++ +D S I +D GA I+ K K+ Sbjct: 141 LELPSLLDKAAAAMLHEGIGGAAKNAVVRIDFSRIEMVDESGAEECARILGAARKARRKL 200 Query: 70 KLQGVSTHIEQLFSLISFTHRKKI 93 ++ GV I L L+ TH + + Sbjct: 201 QVSGVDRLIALLQDLLRATHSRAV 224 >gi|84387819|ref|ZP_00990834.1| Putative anti-sigma B factor antagonist [Vibrio splendidus 12B01] gi|86147569|ref|ZP_01065879.1| Putative anti-sigma B factor antagonist [Vibrio sp. MED222] gi|218710666|ref|YP_002418287.1| putative anti-sigma B factor antagonist [Vibrio splendidus LGP32] gi|84377334|gb|EAP94202.1| Putative anti-sigma B factor antagonist [Vibrio splendidus 12B01] gi|85834608|gb|EAQ52756.1| Putative anti-sigma B factor antagonist [Vibrio sp. MED222] gi|218323685|emb|CAV20014.1| putative anti-sigma B factor antagonist [Vibrio splendidus LGP32] Length = 102 Score = 36.0 bits (82), Expect = 8.8, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 14/85 (16%) Query: 14 NWKSPE------ISEIADDVVMAINKSIQS-----DSAIVDLSAITEIDTIGAELIMYFM 62 W++ + +I D V AI + ++ S +DLS I +D+ G ++++ + Sbjct: 5 QWQALSSKEYQLLGDIDRDSVPAIWRILEKWQTTESSVEIDLSHINRVDSAGMVMLIHLL 64 Query: 63 E---KYHGKIKLQGVSTHIEQLFSL 84 E + I L V + LF L Sbjct: 65 EHAKNQNCHIMLSFVPEQLRTLFQL 89 >gi|329938574|ref|ZP_08287999.1| anti-sigma-factor antagonist [Streptomyces griseoaurantiacus M045] gi|329302547|gb|EGG46438.1| anti-sigma-factor antagonist [Streptomyces griseoaurantiacus M045] Length = 114 Score = 36.0 bits (82), Expect = 8.8, Method: Composition-based stats. Identities = 13/95 (13%), Positives = 32/95 (33%), Gaps = 2/95 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G+ V G + + ++ +VDLS ++ +D+ G + + + Sbjct: 14 DGVRVVSVRGE--IDNDGKDVLRQALLPADGMEPARLVVDLSGVSFMDSSGINVFVAAHQ 71 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 G ++ E + ++ I P Sbjct: 72 AVTGTEGWVRIAAAQESVLRVLRLVGVDAIITCHP 106 >gi|316979573|gb|EFV62349.1| putative ATP synthase F0, A subunit [Trichinella spiralis] Length = 809 Score = 36.0 bits (82), Expect = 8.8, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 71/226 (31%), Gaps = 51/226 (22%) Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 V V + Q G+ S D + ++ + + T + + Sbjct: 226 TAVRSVGISRFRCIFLPTG-GLFLYSQFRD-GSNELSSDTVRLIFI-----VFTCMAV-- 276 Query: 223 RSGSAIVAEIGSMKINEEIDAI-------RTMGLDFVRILISPRIWALI----------- 264 G+A+ A + M+ E+++++ + +D V + + + +I Sbjct: 277 -VGTALFALLKQMRPEEQLESLLEYESDRESPSVDSVAVTMVKKRLTVIEEIVRTFKLLQ 335 Query: 265 -ISLPLLTILANFSAIIGASIVIWKYYDIPFA-VFFSRFHSTATLANIFTGLIKA----P 318 ++ L ++ +S I+ + F F L IF GL ++ Sbjct: 336 SGNMICLVVVFLYSGILLTFWSGVYGTCLTFTRQFTVSTKVLLALNVIFVGLGESLGSGL 395 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVT---TCVVQ--SISIVII 359 I + S+G+ V VV S ++ + Sbjct: 396 VFGLIISTI------------ESMGRPVVIILGAVVNVLSFFLIFL 429 >gi|315185595|gb|EFU19364.1| anti-sigma-factor antagonist [Spirochaeta thermophila DSM 6578] Length = 130 Score = 36.0 bits (82), Expect = 8.8, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 36/115 (31%), Gaps = 5/115 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61 E + G + I D + + ++DL +T ID+ G ++Y Sbjct: 8 EKHSFILSLTGELDLYQAPRIKDMLQKVFPEH--PAKIVLDLDGLTYIDSSGIGALLYAY 65 Query: 62 --MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI 114 ++ L + ++++ L H I + S + + Sbjct: 66 SEAKRRDIAFYLVNLHGSVKRVIELTKLLHYFPIAPSLEEALHEEESSADPSEEM 120 >gi|182624553|ref|ZP_02952336.1| putative membrane protein [Clostridium perfringens D str. JGS1721] gi|177910361|gb|EDT72742.1| putative membrane protein [Clostridium perfringens D str. JGS1721] Length = 235 Score = 36.0 bits (82), Expect = 8.8, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 65/171 (38%), Gaps = 17/171 (9%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 + +++I F+ + G + S + ++ L L I ++ ++++ + Sbjct: 16 LFSIVIIGFLVVCFQSYIGYKETSIPSSALYVTGLDIFSSL--IFPVMITILVSL----S 69 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 ++ +M I + + +R + + A +I++ + +LA + + Sbjct: 70 FYHDVENMGIQ-----LFILKGISIRKIFYSKWIAYVIAMIIYFLLAFSITVFFMVLRGI 124 Query: 288 KYYDIPFAVF------FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 DI + F L+ I G++K F+ IG++A G Sbjct: 125 NIIDIFYNTFTYLIYSILSIILLVNLSFILYGVLKNYFIPILIGVIASIIG 175 >gi|167947403|ref|ZP_02534477.1| hypothetical protein Epers_13027 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 30 Score = 36.0 bits (82), Expect = 8.9, Method: Composition-based stats. Identities = 7/28 (25%), Positives = 12/28 (42%) Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + T VV S V+++D + F Sbjct: 2 SRATTRTVVHSALAVLMLDFVLTALMFG 29 >gi|158312886|ref|YP_001505394.1| anti-sigma-factor antagonist [Frankia sp. EAN1pec] gi|158108291|gb|ABW10488.1| anti-sigma-factor antagonist [Frankia sp. EAN1pec] Length = 142 Score = 36.0 bits (82), Expect = 8.9, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 35/119 (29%), Gaps = 6/119 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59 E G R AG + E+ + AI+ VD+ + D G +++ Sbjct: 16 GEGGNQTLRLAGTVDVRSVGELRMLLHNAIDA--GRGPLHVDVGGLELGDHAGVGVLLGG 73 Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 + L S + +L + I R P R H +G Sbjct: 74 ARRARALGRTLVLVDASAALGRLLA-IDRLGRLLRVQIAPDRLTAVPPGAGGHGTVGHA 131 >gi|295103336|emb|CBL00880.1| anti-anti-sigma factor [Faecalibacterium prausnitzii SL3/3] Length = 107 Score = 36.0 bits (82), Expect = 9.0, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 4/78 (5%) Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFMEKYHG 67 AG + + A+ S + I+DL + +D+ G LI+ Sbjct: 17 LAGEIDHDAAQSLRMQLDDAL-VSRSPRTLIIDLGGVGFMDSSGIGLILGRQRCARVLGT 75 Query: 68 KIKLQGVSTHIEQLFSLI 85 ++LQ ++++ L Sbjct: 76 TLRLQHAPAQLQKVLRLA 93 >gi|160944903|ref|ZP_02092130.1| hypothetical protein FAEPRAM212_02419 [Faecalibacterium prausnitzii M21/2] gi|158444087|gb|EDP21091.1| hypothetical protein FAEPRAM212_02419 [Faecalibacterium prausnitzii M21/2] Length = 321 Score = 36.0 bits (82), Expect = 9.0, Method: Composition-based stats. Identities = 37/253 (14%), Positives = 79/253 (31%), Gaps = 52/253 (20%) Query: 40 AIVDLSAITEID-TIGA-----ELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 +D + T +D T G ++ + G++ ++Q + + Sbjct: 28 LAIDPAG-TYLDGTAGGAGHSRQIALRLDAAKGGRL------ISLDQDPDAVQTARSRLA 80 Query: 94 KNQKPQRSFFYNSFKNLHYHIG-KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGF 152 + +G +KI + D +H L + + Sbjct: 81 GLPATVVQINFRYAGQALEQLGIEKINGALLDLGVSSHQLDDAARGFSYRADAPLDMR-- 138 Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS-ILQLREI 211 M G + + + ++ A L +G E ++ + I++ RE Sbjct: 139 -------MSQQGETA-------ADLVNTESREELARILRDYGEEPYAWQIAGKIVEARET 184 Query: 212 GVLLTAVMIAGRSGSAI-----------------VAEIGSMKINEEIDAIRTMGLDFVRI 254 +LT + +A SA+ I +N E+DA+ GLD + Sbjct: 185 APILTTLQLADIVASAMPPAERRKNKNPSRRTFQALRIA---VNHELDALEE-GLDTIFD 240 Query: 255 LISPRIWALIISL 267 ++P +I+ Sbjct: 241 HLAPGGRLCVITF 253 >gi|296394898|ref|YP_003659782.1| MMPL domain-containing protein [Segniliparus rotundus DSM 44985] gi|296182045|gb|ADG98951.1| MMPL domain protein [Segniliparus rotundus DSM 44985] Length = 960 Score = 36.0 bits (82), Expect = 9.1, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 45/118 (38%), Gaps = 10/118 (8%) Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAV-FFSRFHSTATLANIFTGL-----IKA 317 ++ + LT++ + S++ A+ F S + + G+ I A Sbjct: 790 VLLVAALTVIFTVVLFLLRSVIAAGVVIASVAISFLSTLGVSVLVWQHILGVQVHWSIPA 849 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS----IVIIIDSLFAIFYFAI 371 A I + A V +G V T V++S++ +V +FA+ F++ Sbjct: 850 AVFAVLIAVGADYNMLVVSRFKEEMGAGVRTGVIRSMTGTGAVVTTAGMVFAMTMFSM 907 >gi|146306600|ref|YP_001187065.1| hypothetical protein Pmen_1569 [Pseudomonas mendocina ymp] gi|145574801|gb|ABP84333.1| hypothetical protein Pmen_1569 [Pseudomonas mendocina ymp] Length = 108 Score = 36.0 bits (82), Expect = 9.1, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 35/90 (38%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 G+ E+ + + ++ A+ S +DL + E+D+ GA+L++ + + Sbjct: 15 LALLGSLTIYEVRQAHEALLAALTGSAAGGHWQLDLGQLEELDSAGAQLLLALQRQLTQQ 74 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 V + + L+ + + P Sbjct: 75 QTRLEVVSAADAPRELLEVLRLQSLLPTTP 104 >gi|302337831|ref|YP_003803037.1| anti-sigma-factor antagonist [Spirochaeta smaragdinae DSM 11293] gi|301635016|gb|ADK80443.1| anti-sigma-factor antagonist [Spirochaeta smaragdinae DSM 11293] Length = 116 Score = 36.0 bits (82), Expect = 9.3, Method: Composition-based stats. Identities = 12/82 (14%), Positives = 36/82 (43%), Gaps = 5/82 (6%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---M 62 I + +G+ + D V I K + +++L + +D+ G +++ + Sbjct: 11 IYIIDISGDMDLYNAHRLKDVVAKLIAKGVS--ELVINLEKVDYLDSSGVGALIHVFTQV 68 Query: 63 EKYHGKIKLQGVSTHIEQLFSL 84 ++ ++++ V +E++ L Sbjct: 69 KQRELQMRITHVHGSVEKVIRL 90 >gi|326789168|ref|YP_004306989.1| hypothetical protein Clole_0029 [Clostridium lentocellum DSM 5427] gi|326539932|gb|ADZ81791.1| hypothetical protein Clole_0029 [Clostridium lentocellum DSM 5427] Length = 315 Score = 36.0 bits (82), Expect = 9.3, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P + +I V + A + FG IF I + S + ++A++IA S+ Sbjct: 220 LPFIGIIGSVILTFLGFFIAGIVGSFGVGIFIIGITSFFATQ-----ISALLIALGITSS 274 Query: 228 IVA 230 I A Sbjct: 275 ITA 277 >gi|168699825|ref|ZP_02732102.1| hypothetical protein GobsU_09893 [Gemmata obscuriglobus UQM 2246] Length = 127 Score = 36.0 bits (82), Expect = 9.4, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 3/69 (4%) Query: 19 EISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEKYHGKIKLQGVS 75 + + A ++V+A K ++ IVDLSA+T + ++ + ++ L GV+ Sbjct: 35 TLLQPAAEMVLAPLKEDPPNNIIVDLSAVTYFGSAFITFLLRCHHLLASRGSELVLAGVN 94 Query: 76 THIEQLFSL 84 +I +L + Sbjct: 95 PNIRELLRI 103 >gi|319951120|ref|ZP_08024969.1| glutaminase [Dietzia cinnamea P4] gi|319435213|gb|EFV90484.1| glutaminase [Dietzia cinnamea P4] Length = 418 Score = 36.0 bits (82), Expect = 9.5, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 32/81 (39%), Gaps = 5/81 (6%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSD-SAIVDLSAITEIDTIGAELIMYFM 62 +G FR G A+ V+ + + + +DLS ++ ++T +++ M Sbjct: 326 SGRRTFRLQGPMTFAS----AEQVLRRLAEIPEGPGEVTLDLSRVSSVNTSARRMLLEAM 381 Query: 63 EKYHGKIKLQGVSTHIEQLFS 83 + + G++ +L Sbjct: 382 RRLSAEGHTVGLADPGRRLPE 402 >gi|167951067|ref|ZP_02538141.1| Anti-anti-sigma regulatory factor [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 109 Score = 36.0 bits (82), Expect = 9.5, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 27/91 (29%), Gaps = 6/91 (6%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY- 60 G +V G ++ + + +VDLS +T ID+ G ++ Sbjct: 7 EREGFSVLYLTGEVDLSCSPNARKAILDCLQNK---RNLLVDLSEVTYIDSSGVASLVEG 63 Query: 61 --FMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 L VS + L H Sbjct: 64 YQLSRTLELDFSLVRVSDAAMNVLRLARLDH 94 >gi|126347733|emb|CAJ89450.1| putative anti-sigma factor antagonist [Streptomyces ambofaciens ATCC 23877] Length = 119 Score = 36.0 bits (82), Expect = 9.5, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 36/91 (39%), Gaps = 6/91 (6%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + +G V +G + V A ++DLSA+T D+ G +++ Sbjct: 15 TPSGTFVLEVSGELDHHTAQLLTHAVNDA---PFDDGGVVIDLSALTYCDSTGITVLIGA 71 Query: 62 MEK---YHGKIKLQGVSTHIEQLFSLISFTH 89 ++ + L GV+ ++F+++ Sbjct: 72 YQRSQATGSPLSLAGVNPDQMRVFTVVGLDQ 102 >gi|330809064|ref|YP_004353526.1| hypothetical protein PSEBR_a2246 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377172|gb|AEA68522.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 105 Score = 36.0 bits (82), Expect = 9.6, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 3/54 (5%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 + G +E D ++ + +DL + E+DT G +L++ Sbjct: 9 RRILVLEGPLTIYTAAERKDLLLELFPL---AQEVEMDLGGVDEMDTAGLQLLV 59 >gi|308189081|ref|YP_003933212.1| Anti-sigma F factor antagonist [Pantoea vagans C9-1] gi|308059591|gb|ADO11763.1| Anti-sigma F factor antagonist [Pantoea vagans C9-1] Length = 101 Score = 36.0 bits (82), Expect = 9.6, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 31/85 (36%), Gaps = 8/85 (9%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E + G + + I D +D++A+ +D+ G L+++ Sbjct: 8 EREASTLLLKGELDRDTLMSLWQQRETLIK-----DVDTIDVAALERVDSSGLALLVHLR 62 Query: 63 EKYHGK---IKLQGVSTHIEQLFSL 84 E + + G+S + L +L Sbjct: 63 EIARAQGITPRFTGISDKLHSLITL 87 >gi|91975244|ref|YP_567903.1| GGDEF domain-containing protein [Rhodopseudomonas palustris BisB5] gi|91681700|gb|ABE38002.1| diguanylate cyclase/phosphodiesterase [Rhodopseudomonas palustris BisB5] Length = 905 Score = 36.0 bits (82), Expect = 9.8, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 73/210 (34%), Gaps = 26/210 (12%) Query: 12 AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKL 71 +G W E+S IAD +K+ + V+L T +D G LI+ + Sbjct: 149 SGAWPVSELS-IADRAYFRAHKAGTAPRTTVELVRNT-LD--GGWLIVMAQRLTNANGDF 204 Query: 72 QGV------STHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 G+ HIEQ + +S I + F + IG+ + + + Sbjct: 205 LGIVSRSLTPAHIEQFLASVSLGGDSAISIHH-RDGFLMARHPHAEEIIGRNLRSGLAEE 263 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ- 184 +N S + L+S + +P+V+ + T +A Sbjct: 264 LKMFD------ANVNVQLTSPVDGRDRLVSTY------ALKNLPIVVFSATTTDEALAAW 311 Query: 185 --QGAFQLSQFGAEIFSIDLMSILQLREIG 212 Q +S + ++ +L +REIG Sbjct: 312 RKQTRLLISAATISALVVSVILLLIIREIG 341 >gi|297561207|ref|YP_003680181.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296845655|gb|ADH67675.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 136 Score = 36.0 bits (82), Expect = 9.9, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 32/84 (38%), Gaps = 4/84 (4%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF--- 61 G+TV G + D ++ A + S + D +VD+S + D G ++ Sbjct: 17 GVTVVPVHGEVDLATADRVRDRLLQAAHAS-RCDCLVVDMSGLDFFDASGVSALVAVYKS 75 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLI 85 + + + L + ++ + Sbjct: 76 LTREGRHVVLAEPAPIAARVLEAL 99 Database: nr Posted date: May 13, 2011 4:10 AM Number of letters in database: 999,999,932 Number of sequences in database: 2,987,209 Database: /data/usr2/db/fasta/nr.01 Posted date: May 13, 2011 4:17 AM Number of letters in database: 999,998,956 Number of sequences in database: 2,896,973 Database: /data/usr2/db/fasta/nr.02 Posted date: May 13, 2011 4:23 AM Number of letters in database: 999,999,979 Number of sequences in database: 2,907,862 Database: /data/usr2/db/fasta/nr.03 Posted date: May 13, 2011 4:29 AM Number of letters in database: 999,999,513 Number of sequences in database: 2,932,190 Database: /data/usr2/db/fasta/nr.04 Posted date: May 13, 2011 4:33 AM Number of letters in database: 792,586,372 Number of sequences in database: 2,260,650 Lambda K H 0.314 0.154 0.426 Lambda K H 0.267 0.0473 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,998,392,756 Number of Sequences: 13984884 Number of extensions: 336677078 Number of successful extensions: 1625453 Number of sequences better than 10.0: 8501 Number of HSP's better than 10.0 without gapping: 4194 Number of HSP's successfully gapped in prelim test: 6374 Number of HSP's that attempted gapping in prelim test: 1612525 Number of HSP's gapped (non-prelim): 14345 length of query: 373 length of database: 4,792,584,752 effective HSP length: 140 effective length of query: 233 effective length of database: 2,834,700,992 effective search space: 660485331136 effective search space used: 660485331136 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.8 bits) S2: 82 (36.0 bits)